RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RNPEPL1 (Homo sapiens)

Ensembl gene IDs: ENSG00000142327

Ensembl transcript IDs: ENST00000270357.10, ENST00000437406.1, ENST00000451363.5, ENST00000460884.1, ENST00000464550.5, ENST00000471657.1, ENST00000481757.5, ENST00000486058.5, ENST00000493398.5, ENST00000498042.1

Found 561 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CTGGGAGAGCCCAGGGGAGGGGCTTGTGGGCCTGGGCAGAGCTCATaGCCAGAGCCGAGACGCAGTCATGGCAGGCCTGGCCCACAGAAG +
Preference number: 1 (lower is better)
Translates to: LGEPRGGACGPGQSS*PEPRRSHGRPGPQK
Trigger: CTTCTGTGGGCCAGGCCTGCCATGACTGCGTCTCGGCTCTGGCCATGAGCTCTGCCCAGGCCCACAAGCCCCTCCCCTGGGCTCTCCCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000270357.10
ENST00000437406.1
3UTR CCA 90 bp AGCCAGGTGTCAGGCACAGGTGCGCAGCTCAGCAGCGTCCGGAGGTaGCGCTGTGGGCGTGGCTGTAGGCACGTGGAGTGGAGTCACCCG +
Preference number: 1 (lower is better)
Translates to: SQVSGTGAQLSSVRR*RCGRGCRHVEWSHP
Trigger: CGGGTGACTCCACTCCACGTGCCTACAGCCACGCCCACAGCGCCACCTCCGGACGCTGCTGAGCTGCGCACCTGTGCCTGACACCTGGCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270357.10
3UTR CCA 90 bp CGTGATACCCCATCACAGCAGTCCCAGGCTGGAGGCCCCAGGCTCTaGCCGCCTCTCCCAGCATGGTGGGCCTGGAGAGAGCACCAGCAC +
Preference number: 1 (lower is better)
Translates to: RDTPSQQSQAGGPRL*PPLPAWWAWREHQH
Trigger: GTGCTGGTGCTCTCTCCAGGCCCACCATGCTGGGAGAGGCGGCCAGAGCCTGGGGCCTCCAGCCTGGGACTGCTGTGATGGGGTATCACG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000270357.10
ENST00000437406.1
3UTR GCA 90 bp TGGGCACTGCTGCTGAGTTTCCCAAAGCCAGGTGTCAGGCACAGGTaGGCAGCTCAGCAGCGTCCGGAGGTGGCGCTGTGGGCGTGGCTG +
Preference number: 1 (lower is better)
Translates to: WALLLSFPKPGVRHR*AAQQRPEVALWAWL
Trigger: CAGCCACGCCCACAGCGCCACCTCCGGACGCTGCTGAGCTGCGCACCTGTGCCTGACACCTGGCTTTGGGAAACTCAGCAGCAGTGCCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270357.10
3UTR TCA 90 bp GTGCTGCTTCTGGGCCACGGCATGTTGGCCAGGTGTGCGTGGCACTaGGATGGTGGCGCCACATCCTTGGGGACTGTGAAGGGCAGCGAC +
Preference number: 1 (lower is better)
Translates to: VLLLGHGMLARCAWH*DGGATSLGTVKGSD
Trigger: GTCGCTGCCCTTCACAGTCCCCAAGGATGTGGCGCCACCATCTCAGTGCCACGCACACCTGGCCAACATGCCGTGGCCCAGAAGCAGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270357.10
3UTR TCA 90 bp CAGATGCCCTCCTGCCCCCAGGGTCATGACGCTGGGCACTGCTGCTaGGTTTCCCAAAGCCAGGTGTCAGGCACAGGTGCGCAGCTCAGC +
Preference number: 1 (lower is better)
Translates to: QMPSCPQGHDAGHCC*VSQSQVSGTGAQLS
Trigger: GCTGAGCTGCGCACCTGTGCCTGACACCTGGCTTTGGGAAACTCAGCAGCAGTGCCCAGCGTCATGACCCTGGGGGCAGGAGGGCATCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000270357.10
3UTR GCA 90 bp GCAGGGGCCCTAGCTGTGCCTGCCTGGCAAGACTTTAGATGGCCATaGAGCAGGGGCTGCCAGGTGCCCTCCATACCCGCTTTCACAGGG +
Preference number: 1 (lower is better)
Translates to: AGALAVPAWQDFRWP*SRGCQVPSIPAFTG
Trigger: CCCTGTGAAAGCGGGTATGGAGGGCACCTGGCAGCCCCTGCTGCATGGCCATCTAAAGTCTTGCCAGGCAGGCACAGCTAGGGCCCCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270357.10
3UTR CCA 90 bp TCCCAGGCAGGGGCCCTAGCTGTGCCTGCCTGGCAAGACTTTAGATaGCCATGCAGCAGGGGCTGCCAGGTGCCCTCCATACCCGCTTTC +
Preference number: 1 (lower is better)
Translates to: SQAGALAVPAWQDFR*PCSRGCQVPSIPAF
Trigger: GAAAGCGGGTATGGAGGGCACCTGGCAGCCCCTGCTGCATGGCCATCTAAAGTCTTGCCAGGCAGGCACAGCTAGGGCCCCTGCCTGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270357.10
3UTR CCA 90 bp TGGGCAGAGCTCATGGCCAGAGCCGAGACGCAGTCATGGCAGGCCTaGCCCACAGAAGGCACAATTGTGGTGTCTGGGAGGTCGAGGGTC +
Preference number: 1 (lower is better)
Translates to: WAELMARAETQSWQA*PTEGTIVVSGRSRV
Trigger: GACCCTCGACCTCCCAGACACCACAATTGTGCCTTCTGTGGGCCAGGCCTGCCATGACTGCGTCTCGGCTCTGGCCATGAGCTCTGCCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270357.10
ENST00000437406.1
3UTR CCA 90 bp TTGTGGGCCTGGGCAGAGCTCATGGCCAGAGCCGAGACGCAGTCATaGCAGGCCTGGCCCACAGAAGGCACAATTGTGGTGTCTGGGAGG +
Preference number: 1 (lower is better)
Translates to: LWAWAELMARAETQS*QAWPTEGTIVVSGR
Trigger: CCTCCCAGACACCACAATTGTGCCTTCTGTGGGCCAGGCCTGCCATGACTGCGTCTCGGCTCTGGCCATGAGCTCTGCCCAGGCCCACAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270357.10
ENST00000437406.1
3UTR CCA 90 bp TCTGGGCCACGGCATGTTGGCCAGGTGTGCGTGGCACTGAGATGGTaGCGCCACATCCTTGGGGACTGTGAAGGGCAGCGACACCTATCG +
Preference number: 1 (lower is better)
Translates to: SGPRHVGQVCVALRW*RHILGDCEGQRHLS
Trigger: CGATAGGTGTCGCTGCCCTTCACAGTCCCCAAGGATGTGGCGCCACCATCTCAGTGCCACGCACACCTGGCCAACATGCCGTGGCCCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270357.10
3UTR CCA 90 bp GCTTCTGGGCCACGGCATGTTGGCCAGGTGTGCGTGGCACTGAGATaGTGGCGCCACATCCTTGGGGACTGTGAAGGGCAGCGACACCTA +
Preference number: 1 (lower is better)
Translates to: ASGPRHVGQVCVALR*WRHILGDCEGQRHL
Trigger: TAGGTGTCGCTGCCCTTCACAGTCCCCAAGGATGTGGCGCCACCATCTCAGTGCCACGCACACCTGGCCAACATGCCGTGGCCCAGAAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270357.10
3UTR CCA 90 bp AGCGTCCGGAGGTGGCGCTGTGGGCGTGGCTGTAGGCACGTGGAGTaGAGTCACCCGCAGACCACAGAGTCATTTCGAGAGCTGAATTGC +
Preference number: 1 (lower is better)
Translates to: SVRRWRCGRGCRHVE*SHPQTTESFRELNC
Trigger: GCAATTCAGCTCTCGAAATGACTCTGTGGTCTGCGGGTGACTCCACTCCACGTGCCTACAGCCACGCCCACAGCGCCACCTCCGGACGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270357.10
3UTR GCA 90 bp GCCCCAAGTCCCGGCAGGCCAGCCCACCCTACACAGCCAGGAAGATaGAGAGGACAAGAGTCGCGAGAAAGAGCGCAGGAGATCAGGTTT +
Preference number: 1 (lower is better)
Translates to: APSPGRPAHPTQPGR*RGQESRERAQEIRF
Trigger: AAACCTGATCTCCTGCGCTCTTTCTCGCGACTCTTGTCCTCTGCATCTTCCTGGCTGTGTAGGGTGGGCTGGCCTGCCGGGACTTGGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270357.10
3UTR GCA 90 bp GCTGTGCCTGCCTGGCAAGACTTTAGATGGCCATGCAGCAGGGGCTaGCAGGTGCCCTCCATACCCGCTTTCACAGGGGTTACTGCAGTC +
Preference number: 1 (lower is better)
Translates to: AVPAWQDFRWPCSRG*QVPSIPAFTGVTAV
Trigger: GACTGCAGTAACCCCTGTGAAAGCGGGTATGGAGGGCACCTGGCAGCCCCTGCTGCATGGCCATCTAAAGTCTTGCCAGGCAGGCACAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270357.10
3UTR GCA 90 bp GAGAGAGCACCAGCACCACCTCCCACTTTCCCTGGGGTATTGCTTTaGCCCTGTGCCTCCCACCCCAGGAAGCTACAAGAGACAGGCTGT +
Preference number: 1 (lower is better)
Translates to: ERAPAPPPTFPGVLL*PCASHPRKLQETGC
Trigger: ACAGCCTGTCTCTTGTAGCTTCCTGGGGTGGGAGGCACAGGGGCAAAGCAATACCCCAGGGAAAGTGGGAGGTGGTGCTGGTGCTCTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000270357.10
ENST00000437406.1
3UTR TCA 90 bp GGTGTGCGTGGCACTGAGATGGTGGCGCCACATCCTTGGGGACTGTaGAGGGCAGCGACACCTATCGCCTGGGAAAATGGAAATCTCAGT +
Preference number: 1 (lower is better)
Translates to: GVRGTEMVAPHPWGL*RAATPIAWENGNLS
Trigger: ACTGAGATTTCCATTTTCCCAGGCGATAGGTGTCGCTGCCCTTCACAGTCCCCAAGGATGTGGCGCCACCATCTCAGTGCCACGCACACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270357.10
3UTR GCA 90 bp CTGCCTGGCAAGACTTTAGATGGCCATGCAGCAGGGGCTGCCAGGTaGCCTCCATACCCGCTTTCACAGGGGTTACTGCAGTCATCCTAT +
Preference number: 1 (lower is better)
Translates to: LPGKTLDGHAAGAAR*PPYPLSQGLLQSSY
Trigger: ATAGGATGACTGCAGTAACCCCTGTGAAAGCGGGTATGGAGGGCACCTGGCAGCCCCTGCTGCATGGCCATCTAAAGTCTTGCCAGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270357.10
3UTR TCA 90 bp AGGAGATCAGGTTTGCAGAGTGGAAGTTTAATGGGACCATCACCGTaGTACCCCATCACAGCAGTCCCAGGCTGGAGGCCCCAGGCTCTG +
Preference number: 1 (lower is better)
Translates to: RRSGLQSGSLMGPSP*YPITAVPGWRPQAL
Trigger: CAGAGCCTGGGGCCTCCAGCCTGGGACTGCTGTGATGGGGTATCACGGTGATGGTCCCATTAAACTTCCACTCTGCAAACCTGATCTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270357.10
3UTR CCA 90 bp ATTTGGCTTAAGCCACAGGTGAAGGCCCAGAGTGAAGGTGACACATaGCTTTCCTGTGACATCCAGAGGCTACTCAGGCCCAGGGGGTCC +
Preference number: 1 (lower is better)
Translates to: IWLKPQVKAQSEGDT*LSCDIQRLLRPRGS
Trigger: GGACCCCCTGGGCCTGAGTAGCCTCTGGATGTCACAGGAAAGCCATGTGTCACCTTCACTCTGGGCCTTCACCTGTGGCTTAAGCCAAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000270357.10
3UTR TCA 90 bp GGGAAAGGATCACCACTGAGGCCGGGATTTGGCTTAAGCCACAGGTaGAGGCCCAGAGTGAAGGTGACACATGGCTTTCCTGTGACATCC +
Preference number: 1 (lower is better)
Translates to: GKGSPLRPGFGLSHR*RPRVKVTHGFPVTS
Trigger: GGATGTCACAGGAAAGCCATGTGTCACCTTCACTCTGGGCCTTCACCTGTGGCTTAAGCCAAATCCCGGCCTCAGTGGTGATCCTTTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270357.10
3UTR CCA 90 bp GGGGCATCCAGAACAGGAAGGAGGGTGAGTGGGACATTTGGTGACTaGGGACTGGACAGTGATGGTATCAGGGTTATTTGCCCAGCACCT +
Preference number: 1 (lower is better)
Translates to: GASRTGRRVSGTFGD*GLDSDGIRVICPAP
Trigger: AGGTGCTGGGCAAATAACCCTGATACCATCACTGTCCAGTCCCCAGTCACCAAATGTCCCACTCACCCTCCTTCCTGTTCTGGATGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270357.10
3UTR CCA 90 bp ACCTTGTACCCATCTTGGGAAAGGATCACCACTGAGGCCGGGATTTaGCTTAAGCCACAGGTGAAGGCCCAGAGTGAAGGTGACACATGG +
Preference number: 1 (lower is better)
Translates to: TLYPSWERITTEAGI*LKPQVKAQSEGDTW
Trigger: CCATGTGTCACCTTCACTCTGGGCCTTCACCTGTGGCTTAAGCCAAATCCCGGCCTCAGTGGTGATCCTTTCCCAAGATGGGTACAAGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270357.10
3UTR CCA 90 bp GGACAAGAGTCGCGAGAAAGAGCGCAGGAGATCAGGTTTGCAGAGTaGAAGTTTAATGGGACCATCACCGTGATACCCCATCACAGCAGT +
Preference number: 1 (lower is better)
Translates to: GQESRERAQEIRFAE*KFNGTITVIPHHSS
Trigger: ACTGCTGTGATGGGGTATCACGGTGATGGTCCCATTAAACTTCCACTCTGCAAACCTGATCTCCTGCGCTCTTTCTCGCGACTCTTGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270357.10
3UTR CCA 90 bp TGGCAGAGAAACACTCTGGGAGACAAGTCTGGACTGAACCTGTCATaGCCTGAGGGACTTAGAAAACCTTATTTGGACCTCCAGGGCCTA +
Preference number: 1 (lower is better)
Translates to: WQRNTLGDKSGLNLS*PEGLRKPYLDLQGL
Trigger: TAGGCCCTGGAGGTCCAAATAAGGTTTTCTAAGTCCCTCAGGCCATGACAGGTTCAGTCCAGACTTGTCTCCCAGAGTGTTTCTCTGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270357.10
3UTR CCA 90 bp CTCAGTTCTCCAAAACAAAACATGCCTGTCACCTTGTACCCATCTTaGGAAAGGATCACCACTGAGGCCGGGATTTGGCTTAAGCCACAG +
Preference number: 1 (lower is better)
Translates to: LSSPKQNMPVTLYPS*ERITTEAGIWLKPQ
Trigger: CTGTGGCTTAAGCCAAATCCCGGCCTCAGTGGTGATCCTTTCCCAAGATGGGTACAAGGTGACAGGCATGTTTTGTTTTGGAGAACTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270357.10
3UTR CCA 90 bp GTTTGGGTTGAGTGGCCTGTTTTCCTTCACACTGTGTTGCTGCCCTaGGCAGGTGATTCTCAGTTGTGCCTTACCTTTACATCTGGAGTT +
Preference number: 1 (lower is better)
Translates to: VWVEWPVFLHTVLLP*AGDSQLCLTFTSGV
Trigger: AACTCCAGATGTAAAGGTAAGGCACAACTGAGAATCACCTGCCCAGGGCAGCAACACAGTGTGAAGGAAAACAGGCCACTCAACCCAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270357.10
3UTR GCA 90 bp CTCAGTTGTGCCTTACCTTTACATCTGGAGTTTCCTAATGTTCTGTaGAAAGCATCTGGCCTTAGGAGAGAAACACCACCAATAAGTCCC +
Preference number: 1 (lower is better)
Translates to: LSCALPLHLEFPNVL*KASGLRRETPPISP
Trigger: GGGACTTATTGGTGGTGTTTCTCTCCTAAGGCCAGATGCTTTGCACAGAACATTAGGAAACTCCAGATGTAAAGGTAAGGCACAACTGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270357.10
3UTR-3UTR CCA 90 bp TCCCTGCAAGGAGGCGTGCTGCAGGGACAGCACAGCCTGGGCCCCCGGCAGACAGCACCTGGCAGGTGCTaGCATCCGGGGCTAGGCACA +
Preference number: 2 (lower is better)
Translates to: SLQGGVLQGQHSLGPRQTAPGRC*HPGLGT
Trigger: TGTGCCTAGCCCCGGATGCCAGCACCTGCCAGGTGC...TGTCTGCCGGGGGCCCAGGCTGTGCTGTCCCTGCAGCACGCCTCCTTGCAGGGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000270357.10
ENST00000437406.1
3UTR-3UTR GCA 90 bp ACATTAAGGCACAGTGTGGCGGTCACCATAGGGCTGCTGGGGCCCTTGCCCCGGGCGGCACCTGGCAGGTaGTGGCATCCGGGGCTAGGC +
Preference number: 2 (lower is better)
Translates to: TLRHSVAVTIGLLGPLPRAAPGR*WHPGLG
Trigger: GCCTAGCCCCGGATGCCAGCACCTGCCAGGTGCCGC...CCGGGGCAAGGGCCCCAGCAGCCCTATGGTGACCGCCACACTGTGCCTTAATGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000270357.10
ENST00000437406.1
3UTR-3UTR CCA 90 bp ATTAAGGCACAGTGTGGCGGTCACCATAGGGCTGCTGGGGCCCTTGCCCCGGGGATGGTGTGTGCGGGCTaGCCCCAGGGCCTGCAGTGC +
Preference number: 2 (lower is better)
Translates to: IKAQCGGHHRAAGALAPGMVCAG*PQGLQC
Trigger: GCACTGCAGGCCCTGGGGCCAGCCCGCACACACCAT...CCCCGGGGCAAGGGCCCCAGCAGCCCTATGGTGACCGCCACACTGTGCCTTAAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000270357.10
ENST00000437406.1
3UTR-3UTR CCA 90 bp TCCCTGCAAGGAGGCGTGCTGCAGGGACAGCACAGCCTGGGCCCCCGGCAGACATTGAGACAGGAGGCATaGTGTGTGCGGGCTGGCCCC +
Preference number: 2 (lower is better)
Translates to: SLQGGVLQGQHSLGPRQTLRQEA*CVRAGP
Trigger: GGGGCCAGCCCGCACACACCATGCCTCCTGTCTCAA...TGTCTGCCGGGGGCCCAGGCTGTGCTGTCCCTGCAGCACGCCTCCTTGCAGGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000270357.10
ENST00000437406.1
3UTR-3UTR CCA 90 bp GCACCACCTCCCACTTTCCCTGGGGTATTGCTTTGCCCCTGTGCCTCCCACCCCGGGGCTAAGGTTGCCTaGGGCCAGAGGGCCCTCCCC +
Preference number: 2 (lower is better)
Translates to: APPPTFPGVLLCPCASHPGAKVA*GQRALP
Trigger: GGGGAGGGCCCTCTGGCCCCAGGCAACCTTAGCCCC...GGGGTGGGAGGCACAGGGGCAAAGCAATACCCCAGGGAAAGTGGGAGGTGGTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000270357.10
ENST00000437406.1
3UTR-3UTR CCA 90 bp ATTAAGGCACAGTGTGGCGGTCACCATAGGGCTGCTGGGGCCCTTGCCCCGGGGGCCGAGACGCAGTCATaGCAGGCCTGGCCCACAGAA +
Preference number: 2 (lower is better)
Translates to: IKAQCGGHHRAAGALAPGAETQS*QAWPTE
Trigger: TTCTGTGGGCCAGGCCTGCCATGACTGCGTCTCGGC...CCCCGGGGCAAGGGCCCCAGCAGCCCTATGGTGACCGCCACACTGTGCCTTAAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000270357.10
ENST00000437406.1
3UTR-3UTR CCA 90 bp ATTAAGGCACAGTGTGGCGGTCACCATAGGGCTGCTGGGGCCCTTGCCCCGGGGCAAGAGAGCTGGGAGTaGGGAGGCCAGGTCCACAGG +
Preference number: 2 (lower is better)
Translates to: IKAQCGGHHRAAGALAPGQESWE*GGQVHR
Trigger: CCTGTGGACCTGGCCTCCCCACTCCCAGCTCTCTTG...CCCCGGGGCAAGGGCCCCAGCAGCCCTATGGTGACCGCCACACTGTGCCTTAAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000270357.10
ENST00000437406.1
3UTR-3UTR TCA 90 bp TCCCTGCAAGGAGGCGTGCTGCAGGGACAGCACAGCCTGGGCCCCCGGCAGACACACAGCTGTCAGTGTTaGGACAGGAGGCATGGTGTG +
Preference number: 2 (lower is better)
Translates to: SLQGGVLQGQHSLGPRQTHSCQC*DRRHGV
Trigger: CACACCATGCCTCCTGTCTCAACACTGACAGCTGTG...TGTCTGCCGGGGGCCCAGGCTGTGCTGTCCCTGCAGCACGCCTCCTTGCAGGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000270357.10
ENST00000437406.1
3UTR-3UTR CCA 90 bp TCCCTGCAAGGAGGCGTGCTGCAGGGACAGCACAGCCTGGGCCCCCGGCAGACACAGAAGGCACAATTGTaGTGTCTGGGAGGTCGAGGG +
Preference number: 2 (lower is better)
Translates to: SLQGGVLQGQHSLGPRQTQKAQL*CLGGRG
Trigger: CCCTCGACCTCCCAGACACCACAATTGTGCCTTCTG...TGTCTGCCGGGGGCCCAGGCTGTGCTGTCCCTGCAGCACGCCTCCTTGCAGGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000270357.10
ENST00000437406.1
3UTR-3UTR CCA 90 bp GCACCACCTCCCACTTTCCCTGGGGTATTGCTTTGCCCCTGTGCCTCCCACCCCGCCGAGACGCAGTCATaGCAGGCCTGGCCCACAGAA +
Preference number: 2 (lower is better)
Translates to: APPPTFPGVLLCPCASHPAETQS*QAWPTE
Trigger: TTCTGTGGGCCAGGCCTGCCATGACTGCGTCTCGGC...GGGGTGGGAGGCACAGGGGCAAAGCAATACCCCAGGGAAAGTGGGAGGTGGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000270357.10
ENST00000437406.1
3UTR-3UTR GCA 90 bp AGGTGCCCTCCATACCCGCTTTCACAGGGGTTACTGCAGTCATCCTATCCCTGGGCGGCACCTGGCAGGTaGTGGCATCCGGGGCTAGGC +
Preference number: 2 (lower is better)
Translates to: RCPPYPLSQGLLQSSYPWAAPGR*WHPGLG
Trigger: GCCTAGCCCCGGATGCCAGCACCTGCCAGGTGCCGC...CCAGGGATAGGATGACTGCAGTAACCCCTGTGAAAGCGGGTATGGAGGGCACCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270357.10
3UTR-3UTR CCA 90 bp GTGTTGAGACAGGAGGCATGGTGTGTGCGGGCTGGCCCCAGGGCCTGCAGTGCACACAATTGTGGTGTCTaGGAGGTCGAGGGTCAGCCC +
Preference number: 2 (lower is better)
Translates to: VLRQEAWCVRAGPRACSAHNCGV*EVEGQP
Trigger: GGGCTGACCCTCGACCTCCCAGACACCACAATTGTG...TGCACTGCAGGCCCTGGGGCCAGCCCGCACACACCATGCCTCCTGTCTCAACAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270357.10
ENST00000437406.1
3UTR-3UTR CCA 90 bp GCATGTTGGCCAGGTGTGCGTGGCACTGAGATGGTGGCGCCACATCCTTGGGGATTGAGACAGGAGGCATaGTGTGTGCGGGCTGGCCCC +
Preference number: 2 (lower is better)
Translates to: ACWPGVRGTEMVAPHPWGLRQEA*CVRAGP
Trigger: GGGGCCAGCCCGCACACACCATGCCTCCTGTCTCAA...TCCCCAAGGATGTGGCGCCACCATCTCAGTGCCACGCACACCTGGCCAACATGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270357.10
3UTR-3UTR CCA 90 bp GGTGTGAGGGGCAGTGGCAGTCTTCTAGTTCCTAGGTCTCTGGATGGGGTGGCGGGCTGTGACTGGGCCTaGCCAGCGGGTTGGGAGAAG +
Preference number: 2 (lower is better)
Translates to: GVRGSGSLLVPRSLDGVAGCDWA*PAGWEK
Trigger: CTTCTCCCAACCCGCTGGCCAGGCCCAGTCACAGCC...CGCCACCCCATCCAGAGACCTAGGAACTAGAAGACTGCCACTGCCCCTCACACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270357.10
3UTR-3UTR TCA 90 bp GTGACTGGGGACTGGACAGTGATGGTATCAGGGTTATTTGCCCAGCACCTCCTGCTGCCAGGGGCCAACTaGGGCTGCCAACCCCAGGGG +
Preference number: 2 (lower is better)
Translates to: VTGDWTVMVSGLFAQHLLLPGAN*GCQPQG
Trigger: CCCCTGGGGTTGGCAGCCTCAGTTGGCCCCTGGCAG...CAGGAGGTGCTGGGCAAATAACCCTGATACCATCACTGTCCAGTCCCCAGTCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000270357.10
3UTR-3UTR TCA 90 bp GCCCCAGACCCTAGACCAGAGTTGCCACCGCCACTGGAGGGGACTCATATGTCCTGGGACTCCCTGTTCTaGGGGGCTAAGGTTGCCTGG +
Preference number: 2 (lower is better)
Translates to: APDPRPELPPPLEGTHMSWDSLF*GAKVAW
Trigger: CCAGGCAACCTTAGCCCCTCAGAACAGGGAGTCCCA...GGACATATGAGTCCCCTCCAGTGGCGGTGGCAACTCTGGTCTAGGGTCTGGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000270357.10
3UTR-3UTR CCA 90 bp CCTGTCACCTTGTACCCATCTTGGGAAAGGATCACCACTGAGGCCGGGATTTGGGGGGCTAAGGTTGCCTaGGGCCAGAGGGCCCTCCCC +
Preference number: 2 (lower is better)
Translates to: PVTLYPSWERITTEAGIWGAKVA*GQRALP
Trigger: GGGGAGGGCCCTCTGGCCCCAGGCAACCTTAGCCCC...CCAAATCCCGGCCTCAGTGGTGATCCTTTCCCAAGATGGGTACAAGGTGACAGG
62% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000270357.10
3UTR-3UTR CCA 90 bp AGGGGCAGTGGCAGTCTTCTAGTTCCTAGGTCTCTGGATGGGGTGGCGCCTCCCTCCCCACACTCTCCCTaGGTCCTGGGACTCCCTGTT +
Preference number: 2 (lower is better)
Translates to: RGSGSLLVPRSLDGVAPPSPHSP*VLGLPV
Trigger: AACAGGGAGTCCCAGGACCCAGGGAGAGTGTGGGGA...GGGAGGCGCCACCCCATCCAGAGACCTAGGAACTAGAAGACTGCCACTGCCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000270357.10
3UTR-3UTR TCA 90 bp GAGTTTCCCAAAGCCAGGTGTCAGGCACAGGTGCGCAGCTCAGCAGCGTCCGGACATCCTTGGGGACTGTaGAGGGCAGCGACACCTATC +
Preference number: 2 (lower is better)
Translates to: EFPKARCQAQVRSSAASGHPWGL*RAATPI
Trigger: GATAGGTGTCGCTGCCCTTCACAGTCCCCAAGGATG...TCCGGACGCTGCTGAGCTGCGCACCTGTGCCTGACACCTGGCTTTGGGAAACTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270357.10
3UTR-3UTR GCA 90 bp GGGCACAGAGCCAAGACAGATTGTGGTGAGGGTGCCATCCTGGATCCAGATGCCGCAGGGGCTGCCAGGTaGCCTCCATACCCGCTTTCA +
Preference number: 2 (lower is better)
Translates to: GHRAKTDCGEGAILDPDAAGAAR*PPYPLS
Trigger: TGAAAGCGGGTATGGAGGGCACCTGGCAGCCCCTGC...GGCATCTGGATCCAGGATGGCACCCTCACCACAATCTGTCTTGGCTCTGTGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270357.10
3UTR-3UTR CCA 90 bp ACATTAAGGCACAGTGTGGCGGTCACCATAGGGCTGCTGGGGCCCTTGCCCCGGCAGAAGGCACAATTGTaGTGTCTGGGAGGTCGAGGG +
Preference number: 2 (lower is better)
Translates to: TLRHSVAVTIGLLGPLPRQKAQL*CLGGRG
Trigger: CCCTCGACCTCCCAGACACCACAATTGTGCCTTCTG...CCGGGGCAAGGGCCCCAGCAGCCCTATGGTGACCGCCACACTGTGCCTTAATGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000270357.10
ENST00000437406.1
3UTR-3UTR CCA 90 bp GGTTGCAGCCCCTGTGGTTGTAGGCCCCTTAGAACTTCCACTGCCAGTGTGAGCCCTCTCCCAGCATGGTaGGCCTGGAGAGAGCACCAG +
Preference number: 2 (lower is better)
Translates to: GCSPCGCRPLRTSTASVSPLPAW*AWREHQ
Trigger: CTGGTGCTCTCTCCAGGCCCACCATGCTGGGAGAGG...GCTCACACTGGCAGTGGAAGTTCTAAGGGGCCTACAACCACAGGGGCTGCAACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270357.10
3UTR-3UTR CCA 90 bp GCATGTTGGCCAGGTGTGCGTGGCACTGAGATGGTGGCGCCACATCCTTGGGGACAGTCATGGCAGGCCTaGCCCACAGAAGGCACAATT +
Preference number: 2 (lower is better)
Translates to: ACWPGVRGTEMVAPHPWGQSWQA*PTEGTI
Trigger: AATTGTGCCTTCTGTGGGCCAGGCCTGCCATGACTG...TCCCCAAGGATGTGGCGCCACCATCTCAGTGCCACGCACACCTGGCCAACATGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270357.10
3UTR-3UTR CCA 90 bp GTGAAGGTGACACATGGCTTTCCTGTGACATCCAGAGGCTACTCAGGCCCAGGGCCTGGGCAGAGCTCATaGCCAGAGCCGAGACGCAGT +
Preference number: 2 (lower is better)
Translates to: VKVTHGFPVTSRGYSGPGPGQSS*PEPRRS
Trigger: ACTGCGTCTCGGCTCTGGCCATGAGCTCTGCCCAGG...CCCTGGGCCTGAGTAGCCTCTGGATGTCACAGGAAAGCCATGTGTCACCTTCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270357.10
3UTR-3UTR CCA 90 bp AGGTGCCCTCCATACCCGCTTTCACAGGGGTTACTGCAGTCATCCTATCCCTGGTGGGCCACGGCATGTTaGCCAGGTGTGCGTGGCACT +
Preference number: 2 (lower is better)
Translates to: RCPPYPLSQGLLQSSYPWWATAC*PGVRGT
Trigger: AGTGCCACGCACACCTGGCCAACATGCCGTGGCCCA...CCAGGGATAGGATGACTGCAGTAACCCCTGTGAAAGCGGGTATGGAGGGCACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270357.10
3UTR-3UTR TCA 90 bp GCCCCAGACCCTAGACCAGAGTTGCCACCGCCACTGGAGGGGACTCATATGTCCCACATGGCTTTCCTGTaGCATCCAGAGGCTACTCAG +
Preference number: 2 (lower is better)
Translates to: APDPRPELPPPLEGTHMSHMAFL*HPEATQ
Trigger: CTGAGTAGCCTCTGGATGTCACAGGAAAGCCATGTG...GGACATATGAGTCCCCTCCAGTGGCGGTGGCAACTCTGGTCTAGGGTCTGGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270357.10
3UTR-3UTR TCA 90 bp GGTTGCAGCCCCTGTGGTTGTAGGCCCCTTAGAACTTCCACTGCCAGTGTGAGCTGGCGGGGAAGAGGCTaGGAAAGCAGTTCTGCCACT +
Preference number: 2 (lower is better)
Translates to: GCSPCGCRPLRTSTASVSWRGRG*ESSSAT
Trigger: AGTGGCAGAACTGCTTTCTCAGCCTCTTCCCCGCCA...GCTCACACTGGCAGTGGAAGTTCTAAGGGGCCTACAACCACAGGGGCTGCAACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000270357.10
3UTR-3UTR GCA 90 bp CCCAGGATGAAAGTCTGTGACTGCTGGGACTTGAAAACAACCTTGGCGGGGAAGCCCTGCAAGGAGGCGTaGTGCAGGGACAGCACAGCC +
Preference number: 2 (lower is better)
Translates to: PRMKVCDCWDLKTTLAGKPCKEA*CRDSTA
Trigger: GGCTGTGCTGTCCCTGCAGCACGCCTCCTTGCAGGG...CTTCCCCGCCAAGGTTGTTTTCAAGTCCCAGCAGTCACAGACTTTCATCCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270357.10
3UTR-3UTR GCA 90 bp CCTGTCACCTTGTACCCATCTTGGGAAAGGATCACCACTGAGGCCGGGATTTGGGGTGGCTCAGATCCCTaGAAGGAGGCGTGCTGCAGG +
Preference number: 2 (lower is better)
Translates to: PVTLYPSWERITTEAGIWGGSDP*KEACCR
Trigger: CCTGCAGCACGCCTCCTTGCAGGGATCTGAGCCACC...CCAAATCCCGGCCTCAGTGGTGATCCTTTCCCAAGATGGGTACAAGGTGACAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270357.10
3UTR-3UTR CCA 90 bp GTGACTGGGGACTGGACAGTGATGGTATCAGGGTTATTTGCCCAGCACCTCCTGAGGGGCTTGTGGGCCTaGGCAGAGCTCATGGCCAGA +
Preference number: 2 (lower is better)
Translates to: VTGDWTVMVSGLFAQHLLRGLWA*AELMAR
Trigger: TCTGGCCATGAGCTCTGCCCAGGCCCACAAGCCCCT...CAGGAGGTGCTGGGCAAATAACCCTGATACCATCACTGTCCAGTCCCCAGTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270357.10
3UTR-3UTR CCA 90 bp TGGGCACTGCTGCTGAGTTTCCCAAAGCCAGGTGTCAGGCACAGGTGCGCAGCTAGTTGCCACCGCCACTaGAGGGGACTCATATGTCCT +
Preference number: 2 (lower is better)
Translates to: WALLLSFPKPGVRHRCAASCHRH*RGLICP
Trigger: AGGACATATGAGTCCCCTCCAGTGGCGGTGGCAACT...AGCTGCGCACCTGTGCCTGACACCTGGCTTTGGGAAACTCAGCAGCAGTGCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270357.10
3UTR-3UTR TCA 90 bp ATGACGCTGGGCACTGCTGCTGAGTTTCCCAAAGCCAGGTGTCAGGCACAGGTGCACAGCTGTCAGTGTTaGGACAGGAGGCATGGTGTG +
Preference number: 2 (lower is better)
Translates to: MTLGTAAEFPKARCQAQVHSCQC*DRRHGV
Trigger: CACACCATGCCTCCTGTCTCAACACTGACAGCTGTG...CACCTGTGCCTGACACCTGGCTTTGGGAAACTCAGCAGCAGTGCCCAGCGTCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270357.10
3UTR-3UTR CCA 90 bp AAGTTTAATGGGACCATCACCGTGATACCCCATCACAGCAGTCCCAGGCTGGAGAGGGGCTTGTGGGCCTaGGCAGAGCTCATGGCCAGA +
Preference number: 2 (lower is better)
Translates to: KFNGTITVIPHHSSPRLERGLWA*AELMAR
Trigger: TCTGGCCATGAGCTCTGCCCAGGCCCACAAGCCCCT...CTCCAGCCTGGGACTGCTGTGATGGGGTATCACGGTGATGGTCCCATTAAACTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000270357.10
ENST00000437406.1
3UTR-3UTR CCA 90 bp ATGACGCTGGGCACTGCTGCTGAGTTTCCCAAAGCCAGGTGTCAGGCACAGGTGACCTCCCACTTTCCCTaGGGTATTGCTTTGCCCCTG +
Preference number: 2 (lower is better)
Translates to: MTLGTAAEFPKARCQAQVTSHFP*GIALPL
Trigger: CAGGGGCAAAGCAATACCCCAGGGAAAGTGGGAGGT...CACCTGTGCCTGACACCTGGCTTTGGGAAACTCAGCAGCAGTGCCCAGCGTCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270357.10
3UTR-3UTR CCA 90 bp GAGTGGAAGTTTAATGGGACCATCACCGTGATACCCCATCACAGCAGTCCCAGGCCTCTCCCAGCATGGTaGGCCTGGAGAGAGCACCAG +
Preference number: 2 (lower is better)
Translates to: EWKFNGTITVIPHHSSPRPLPAW*AWREHQ
Trigger: CTGGTGCTCTCTCCAGGCCCACCATGCTGGGAGAGG...CCTGGGACTGCTGTGATGGGGTATCACGGTGATGGTCCCATTAAACTTCCACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270357.10
ENST00000437406.1
3UTR-3UTR CCA 90 bp AAGTTTAATGGGACCATCACCGTGATACCCCATCACAGCAGTCCCAGGCTGGAGTCCCCACACTCTCCCTaGGTCCTGGGACTCCCTGTT +
Preference number: 2 (lower is better)
Translates to: KFNGTITVIPHHSSPRLESPHSP*VLGLPV
Trigger: AACAGGGAGTCCCAGGACCCAGGGAGAGTGTGGGGA...CTCCAGCCTGGGACTGCTGTGATGGGGTATCACGGTGATGGTCCCATTAAACTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000270357.10
ENST00000437406.1
3UTR-3UTR CCA 90 bp AGGGGCAGTGGCAGTCTTCTAGTTCCTAGGTCTCTGGATGGGGTGGCGCCTCCCGCGACACCTATCGCCTaGGAAAATGGAAATCTCAGT +
Preference number: 2 (lower is better)
Translates to: RGSGSLLVPRSLDGVAPPATPIA*ENGNLS
Trigger: ACTGAGATTTCCATTTTCCCAGGCGATAGGTGTCGC...GGGAGGCGCCACCCCATCCAGAGACCTAGGAACTAGAAGACTGCCACTGCCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000270357.10
3UTR-3UTR TCA 90 bp ACAGAGCCAAGACAGATTGTGGTGAGGGTGCCATCCTGGATCCAGATGCCCTCCAAGAAGAGCCCAGGATaGAAGTCTGTGACTGCTGGG +
Preference number: 2 (lower is better)
Translates to: TEPRQIVVRVPSWIQMPSKKSPG*KSVTAG
Trigger: CCCAGCAGTCACAGACTTTCATCCTGGGCTCTTCTT...GGAGGGCATCTGGATCCAGGATGGCACCCTCACCACAATCTGTCTTGGCTCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270357.10
3UTR-3UTR CCA 90 bp GCCTGCAGCATGAGAAAGCTTTGTTGTGTGAGACGTCTGCGCTTCATAGTTGTGGCTGTGCGGGGAGGGTaGCTCAGATCCCTGCAAGGA +
Preference number: 2 (lower is better)
Translates to: ACSMRKLCCVRRLRFIVVAVRGG*LRSLQG
Trigger: TCCTTGCAGGGATCTGAGCCACCCTCCCCGCACAGC...CACAACTATGAAGCGCAGACGTCTCACACAACAAAGCTTTCTCATGCTGCAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270357.10
3UTR-3UTR CCA 90 bp CCTGAGGGACTTAGAAAACCTTATTTGGACCTCCAGGGCCTAGAAATTTGCATGAGCAGCGTCCGGAGGTaGCGCTGTGGGCGTGGCTGT +
Preference number: 2 (lower is better)
Translates to: PEGLRKPYLDLQGLEICMSSVRR*RCGRGC
Trigger: ACAGCCACGCCCACAGCGCCACCTCCGGACGCTGCT...CATGCAAATTTCTAGGCCCTGGAGGTCCAAATAAGGTTTTCTAAGTCCCTCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270357.10
3UTR-3UTR CCA 90 bp GAGTGGAAGTTTAATGGGACCATCACCGTGATACCCCATCACAGCAGTCCCAGGCAGTCATGGCAGGCCTaGCCCACAGAAGGCACAATT +
Preference number: 2 (lower is better)
Translates to: EWKFNGTITVIPHHSSPRQSWQA*PTEGTI
Trigger: AATTGTGCCTTCTGTGGGCCAGGCCTGCCATGACTG...CCTGGGACTGCTGTGATGGGGTATCACGGTGATGGTCCCATTAAACTTCCACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270357.10
ENST00000437406.1
3UTR-3UTR CCA 90 bp GGGCACAGAGCCAAGACAGATTGTGGTGAGGGTGCCATCCTGGATCCAGATGCCAGTGAAGGTGACACATaGCTTTCCTGTGACATCCAG +
Preference number: 2 (lower is better)
Translates to: GHRAKTDCGEGAILDPDASEGDT*LSCDIQ
Trigger: CTGGATGTCACAGGAAAGCCATGTGTCACCTTCACT...GGCATCTGGATCCAGGATGGCACCCTCACCACAATCTGTCTTGGCTCTGTGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270357.10
3UTR CAA 90 bp GGGGAAGAGGCTGAGAAAGCAGTTCTGCCACTGAGCAGGGCTCCTTaGAGGACACCATCAAGCATGGTTAAGAAACAGGAAAGGGGTCCT +
Preference number: 2 (lower is better)
Translates to: GEEAEKAVLPLSRAP*RTPSSMVKKQERGP
Trigger: AGGACCCCTTTCCTGTTTCTTAACCATGCTTGATGGTGTCCTCAAAGGAGCCCTGCTCAGTGGCAGAACTGCTTTCTCAGCCTCTTCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270357.10
3UTR CAA 90 bp GCCCCTCAACAGCTCTCTTATCCCTGGCAAGGTGCCTGGAAACATTaGAGATCTCTGTTCATCGGTACGGGTCCGAGAGTGGTCACATTG +
Preference number: 2 (lower is better)
Translates to: APQQLSYPWQGAWKH*RSLFIGTGPRVVTL
Trigger: CAATGTGACCACTCTCGGACCCGTACCGATGAACAGAGATCTCAAATGTTTCCAGGCACCTTGCCAGGGATAAGAGAGCTGTTGAGGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270357.10
3UTR-3UTR CCA 90 bp GTGACTGGGGACTGGACAGTGATGGTATCAGGGTTATTTGCCCAGCACCTCCTGACCTTGTACCCATCTTaGGAAAGGATCACCACTGAG +
Preference number: 2 (lower is better)
Translates to: VTGDWTVMVSGLFAQHLLTLYPS*ERITTE
Trigger: CTCAGTGGTGATCCTTTCCCAAGATGGGTACAAGGT...CAGGAGGTGCTGGGCAAATAACCCTGATACCATCACTGTCCAGTCCCCAGTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270357.10
3UTR-3UTR TCA 90 bp CCTGAGGGACTTAGAAAACCTTATTTGGACCTCCAGGGCCTAGAAATTTGCATGGTGACTGCTGGGACTTaGAAACAACCTTGGCGGGGA +
Preference number: 2 (lower is better)
Translates to: PEGLRKPYLDLQGLEICMVTAGT*KQPWRG
Trigger: TCCCCGCCAAGGTTGTTTTCAAGTCCCAGCAGTCAC...CATGCAAATTTCTAGGCCCTGGAGGTCCAAATAAGGTTTTCTAAGTCCCTCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270357.10
3UTR-3UTR TCA 90 bp GGGCACAGAGCCAAGACAGATTGTGGTGAGGGTGCCATCCTGGATCCAGATGCCAGTCATTTCGAGAGCTaGATTGCAAAAGAAAGAAGA +
Preference number: 2 (lower is better)
Translates to: GHRAKTDCGEGAILDPDASHFES*IAKERR
Trigger: TCTTCTTTCTTTTGCAATTCAGCTCTCGAAATGACT...GGCATCTGGATCCAGGATGGCACCCTCACCACAATCTGTCTTGGCTCTGTGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270357.10
3UTR-3UTR CCA 90 bp CCTGAGGGACTTAGAAAACCTTATTTGGACCTCCAGGGCCTAGAAATTTGCATGTGGCAAGACTTTAGATaGCCATGCAGCAGGGGCTGC +
Preference number: 2 (lower is better)
Translates to: PEGLRKPYLDLQGLEICMWQDFR*PCSRGC
Trigger: GCAGCCCCTGCTGCATGGCCATCTAAAGTCTTGCCA...CATGCAAATTTCTAGGCCCTGGAGGTCCAAATAAGGTTTTCTAAGTCCCTCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270357.10
3UTR-3UTR GCA 90 bp CCTGAGGGACTTAGAAAACCTTATTTGGACCTCCAGGGCCTAGAAATTTGCATGACACAGCCAGGAAGATaGAGAGGACAAGAGTCGCGA +
Preference number: 2 (lower is better)
Translates to: PEGLRKPYLDLQGLEICMTQPGR*RGQESR
Trigger: TCGCGACTCTTGTCCTCTGCATCTTCCTGGCTGTGT...CATGCAAATTTCTAGGCCCTGGAGGTCCAAATAAGGTTTTCTAAGTCCCTCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270357.10
3UTR-3UTR CCA 90 bp CCTGAGGGACTTAGAAAACCTTATTTGGACCTCCAGGGCCTAGAAATTTGCATGGGCTGGAGCATAACGTaGCCTAATAGAGAAGCTGGC +
Preference number: 2 (lower is better)
Translates to: PEGLRKPYLDLQGLEICMGWSIT*PNREAG
Trigger: GCCAGCTTCTCTATTAGGCCACGTTATGCTCCAGCC...CATGCAAATTTCTAGGCCCTGGAGGTCCAAATAAGGTTTTCTAAGTCCCTCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270357.10
3UTR-3UTR TCA 90 bp CCTGAGGGACTTAGAAAACCTTATTTGGACCTCCAGGGCCTAGAAATTTGCATGGTGCCTGGAAACATTTaGGATCTCTGTTCATCGGTA +
Preference number: 2 (lower is better)
Translates to: PEGLRKPYLDLQGLEICMVPGNI*DLCSSV
Trigger: TACCGATGAACAGAGATCTCAAATGTTTCCAGGCAC...CATGCAAATTTCTAGGCCCTGGAGGTCCAAATAAGGTTTTCTAAGTCCCTCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270357.10
3UTR CCA 72 bp CCCAGGGGAGGGGCTTGTGGGCCTGGGCAGAGCTCATaGCCAGAGCCGAGACGCAGTCATGGCAGGCCTGGC +
Preference number: 3 (lower is better)
Translates to: PRGGACGPGQSS*PEPRRSHGRPG
Trigger: GCCAGGCCTGCCATGACTGCGTCTCGGCTCTGGCCATGAGCTCTGCCCAGGCCCACAAGCCCCTCCCCTGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000270357.10
ENST00000437406.1
3UTR GCA 72 bp GGTGCAGGGCTGTGCGGGGAGGGTGGCTCAGATCCCTaGAAGGAGGCGTGCTGCAGGGACAGCACAGCCTGG +
Preference number: 3 (lower is better)
Translates to: GAGLCGEGGSDP*KEACCRDSTAW
Trigger: CCAGGCTGTGCTGTCCCTGCAGCACGCCTCCTTGCAGGGATCTGAGCCACCCTCCCCGCACAGCCCTGCACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270357.10
ENST00000437406.1
3UTR CCA 72 bp TCAGGCACAGGTGCGCAGCTCAGCAGCGTCCGGAGGTaGCGCTGTGGGCGTGGCTGTAGGCACGTGGAGTGG +
Preference number: 3 (lower is better)
Translates to: SGTGAQLSSVRR*RCGRGCRHVEW
Trigger: CCACTCCACGTGCCTACAGCCACGCCCACAGCGCCACCTCCGGACGCTGCTGAGCTGCGCACCTGTGCCTGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270357.10
3UTR GCA 72 bp CTGCTGAGTTTCCCAAAGCCAGGTGTCAGGCACAGGTaGGCAGCTCAGCAGCGTCCGGAGGTGGCGCTGTGG +
Preference number: 3 (lower is better)
Translates to: LLSFPKPGVRHR*AAQQRPEVALW
Trigger: CCACAGCGCCACCTCCGGACGCTGCTGAGCTGCGCACCTGTGCCTGACACCTGGCTTTGGGAAACTCAGCAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270357.10
3UTR CCA 72 bp CTGGCCAGCGGGTTGGGAGAAGAGACGTGCTGCTTCTaGGCCACGGCATGTTGGCCAGGTGTGCGTGGCACT +
Preference number: 3 (lower is better)
Translates to: LASGLGEETCCF*ATACWPGVRGT
Trigger: AGTGCCACGCACACCTGGCCAACATGCCGTGGCCCAGAAGCAGCACGTCTCTTCTCCCAACCCGCTGGCCAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270357.10
3UTR CCA 72 bp GTCCACTCCCAGGCAGGGGCCCTAGCTGTGCCTGCCTaGCAAGACTTTAGATGGCCATGCAGCAGGGGCTGC +
Preference number: 3 (lower is better)
Translates to: VHSQAGALAVPA*QDFRWPCSRGC
Trigger: GCAGCCCCTGCTGCATGGCCATCTAAAGTCTTGCCAGGCAGGCACAGCTAGGGCCCCTGCCTGGGAGTGGAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270357.10
3UTR TCA 72 bp CTGGGCCACGGCATGTTGGCCAGGTGTGCGTGGCACTaGGATGGTGGCGCCACATCCTTGGGGACTGTGAAG +
Preference number: 3 (lower is better)
Translates to: LGHGMLARCAWH*DGGATSLGTVK
Trigger: CTTCACAGTCCCCAAGGATGTGGCGCCACCATCTCAGTGCCACGCACACCTGGCCAACATGCCGTGGCCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270357.10
3UTR TCA 72 bp TCCTGCCCCCAGGGTCATGACGCTGGGCACTGCTGCTaGGTTTCCCAAAGCCAGGTGTCAGGCACAGGTGCG +
Preference number: 3 (lower is better)
Translates to: SCPQGHDAGHCC*VSQSQVSGTGA
Trigger: CGCACCTGTGCCTGACACCTGGCTTTGGGAAACTCAGCAGCAGTGCCCAGCGTCATGACCCTGGGGGCAGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000270357.10
3UTR CCA 72 bp GTCAGTGTTGAGACAGGAGGCATGGTGTGTGCGGGCTaGCCCCAGGGCCTGCAGTGCAAGAGAGCTGGGAGT +
Preference number: 3 (lower is better)
Translates to: VSVETGGMVCAG*PQGLQCKRAGS
Trigger: ACTCCCAGCTCTCTTGCACTGCAGGCCCTGGGGCCAGCCCGCACACACCATGCCTCCTGTCTCAACACTGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270357.10
ENST00000437406.1
3UTR CCA 72 bp CCACGGCATGTTGGCCAGGTGTGCGTGGCACTGAGATaGTGGCGCCACATCCTTGGGGACTGTGAAGGGCAG +
Preference number: 3 (lower is better)
Translates to: PRHVGQVCVALR*WRHILGDCEGQ
Trigger: CTGCCCTTCACAGTCCCCAAGGATGTGGCGCCACCATCTCAGTGCCACGCACACCTGGCCAACATGCCGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270357.10
3UTR CCA 72 bp GGAGAAGAGACGTGCTGCTTCTGGGCCACGGCATGTTaGCCAGGTGTGCGTGGCACTGAGATGGTGGCGCCA +
Preference number: 3 (lower is better)
Translates to: GEETCCFWATAC*PGVRGTEMVAP
Trigger: TGGCGCCACCATCTCAGTGCCACGCACACCTGGCCAACATGCCGTGGCCCAGAAGCAGCACGTCTCTTCTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270357.10
3UTR CCA 72 bp TCCGGAGGTGGCGCTGTGGGCGTGGCTGTAGGCACGTaGAGTGGAGTCACCCGCAGACCACAGAGTCATTTC +
Preference number: 3 (lower is better)
Translates to: SGGGAVGVAVGT*SGVTRRPQSHF
Trigger: GAAATGACTCTGTGGTCTGCGGGTGACTCCACTCCACGTGCCTACAGCCACGCCCACAGCGCCACCTCCGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270357.10
3UTR-3UTR CAA 90 bp GGTGTGAGGGGCAGTGGCAGTCTTCTAGTTCCTAGGTCTCTGGATGGGGTGGCGGACCCTAGACCAGAGTaGCCACCGCCACTGGAGGGG +
Preference number: 3 (lower is better)
Translates to: GVRGSGSLLVPRSLDGVADPRPE*PPPLEG
Trigger: CCCCTCCAGTGGCGGTGGCAACTCTGGTCTAGGGTC...CGCCACCCCATCCAGAGACCTAGGAACTAGAAGACTGCCACTGCCCCTCACACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270357.10
3UTR GCA 72 bp CTAGCTGTGCCTGCCTGGCAAGACTTTAGATGGCCATaGAGCAGGGGCTGCCAGGTGCCCTCCATACCCGCT +
Preference number: 3 (lower is better)
Translates to: LAVPAWQDFRWP*SRGCQVPSIPA
Trigger: AGCGGGTATGGAGGGCACCTGGCAGCCCCTGCTGCATGGCCATCTAAAGTCTTGCCAGGCAGGCACAGCTAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270357.10
3UTR CCA 72 bp AGTCATGGCAGGCCTGGCCCACAGAAGGCACAATTGTaGTGTCTGGGAGGTCGAGGGTCAGCCCGCCAACAG +
Preference number: 3 (lower is better)
Translates to: SHGRPGPQKAQL*CLGGRGSARQQ
Trigger: CTGTTGGCGGGCTGACCCTCGACCTCCCAGACACCACAATTGTGCCTTCTGTGGGCCAGGCCTGCCATGACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270357.10
ENST00000437406.1
3UTR CCA 72 bp CTCATGGCCAGAGCCGAGACGCAGTCATGGCAGGCCTaGCCCACAGAAGGCACAATTGTGGTGTCTGGGAGG +
Preference number: 3 (lower is better)
Translates to: LMARAETQSWQA*PTEGTIVVSGR
Trigger: CCTCCCAGACACCACAATTGTGCCTTCTGTGGGCCAGGCCTGCCATGACTGCGTCTCGGCTCTGGCCATGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270357.10
ENST00000437406.1
3UTR CCA 72 bp AGGTGGCGCTGTGGGCGTGGCTGTAGGCACGTGGAGTaGAGTCACCCGCAGACCACAGAGTCATTTCGAGAG +
Preference number: 3 (lower is better)
Translates to: RWRCGRGCRHVE*SHPQTTESFRE
Trigger: CTCTCGAAATGACTCTGTGGTCTGCGGGTGACTCCACTCCACGTGCCTACAGCCACGCCCACAGCGCCACCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270357.10
3UTR-3UTR CAA 90 bp ACATTAAGGCACAGTGTGGCGGTCACCATAGGGCTGCTGGGGCCCTTGCCCCGGCCACAGAAGGCACAATaGTGGTGTCTGGGAGGTCGA +
Preference number: 3 (lower is better)
Translates to: TLRHSVAVTIGLLGPLPRPQKAQ*WCLGGR
Trigger: TCGACCTCCCAGACACCACAATTGTGCCTTCTGTGG...CCGGGGCAAGGGCCCCAGCAGCCCTATGGTGACCGCCACACTGTGCCTTAATGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000270357.10
ENST00000437406.1
3UTR-3UTR CAA 90 bp GCACCACCTCCCACTTTCCCTGGGGTATTGCTTTGCCCCTGTGCCTCCCACCCCGCACAGCTGTCAGTGTaGAGACAGGAGGCATGGTGT +
Preference number: 3 (lower is better)
Translates to: APPPTFPGVLLCPCASHPAQLSV*RQEAWC
Trigger: ACACCATGCCTCCTGTCTCAACACTGACAGCTGTGC...GGGGTGGGAGGCACAGGGGCAAAGCAATACCCCAGGGAAAGTGGGAGGTGGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000270357.10
ENST00000437406.1
3UTR GCA 72 bp CCAGGTGCCCTCCATACCCGCTTTCACAGGGGTTACTaGAGTCATCCTATCCCTGGGTGTGAGGGGCAGTGG +
Preference number: 3 (lower is better)
Translates to: PGALHTRFHRGY*SHPIPGCEGQW
Trigger: CCACTGCCCCTCACACCCAGGGATAGGATGACTGCAGTAACCCCTGTGAAAGCGGGTATGGAGGGCACCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270357.10
3UTR-3UTR CAA 90 bp AGACGTGCTGCTTCTGGGCCACGGCATGTTGGCCAGGTGTGCGTGGCACTGAGACCACAGAAGGCACAATaGTGGTGTCTGGGAGGTCGA +
Preference number: 3 (lower is better)
Translates to: RRAASGPRHVGQVCVALRPQKAQ*WCLGGR
Trigger: TCGACCTCCCAGACACCACAATTGTGCCTTCTGTGG...TCTCAGTGCCACGCACACCTGGCCAACATGCCGTGGCCCAGAAGCAGCACGTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270357.10
3UTR-3UTR CAA 90 bp GAGTTTCCCAAAGCCAGGTGTCAGGCACAGGTGCGCAGCTCAGCAGCGTCCGGAGCACAGCTGTCAGTGTaGAGACAGGAGGCATGGTGT +
Preference number: 3 (lower is better)
Translates to: EFPKARCQAQVRSSAASGAQLSV*RQEAWC
Trigger: ACACCATGCCTCCTGTCTCAACACTGACAGCTGTGC...TCCGGACGCTGCTGAGCTGCGCACCTGTGCCTGACACCTGGCTTTGGGAAACTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270357.10
3UTR-3UTR CAA 90 bp ACCCATCTTGGGAAAGGATCACCACTGAGGCCGGGATTTGGCTTAAGCCACAGGCCCTGGGGTATTGCTTaGCCCCTGTGCCTCCCACCC +
Preference number: 3 (lower is better)
Translates to: THLGKGSPLRPGFGLSHRPWGIA*PLCLPP
Trigger: GGGTGGGAGGCACAGGGGCAAAGCAATACCCCAGGG...CCTGTGGCTTAAGCCAAATCCCGGCCTCAGTGGTGATCCTTTCCCAAGATGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270357.10
3UTR TCA 72 bp GGCACTGAGATGGTGGCGCCACATCCTTGGGGACTGTaGAGGGCAGCGACACCTATCGCCTGGGAAAATGGA +
Preference number: 3 (lower is better)
Translates to: GTEMVAPHPWGL*RAATPIAWENG
Trigger: TCCATTTTCCCAGGCGATAGGTGTCGCTGCCCTTCACAGTCCCCAAGGATGTGGCGCCACCATCTCAGTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270357.10
3UTR-3UTR CAA 90 bp GAGTTTCCCAAAGCCAGGTGTCAGGCACAGGTGCGCAGCTCAGCAGCGTCCGGAGACTTGAAAACAACCTaGGCGGGGAAGAGGCTGAGA +
Preference number: 3 (lower is better)
Translates to: EFPKARCQAQVRSSAASGDLKTT*AGKRLR
Trigger: TCTCAGCCTCTTCCCCGCCAAGGTTGTTTTCAAGTC...TCCGGACGCTGCTGAGCTGCGCACCTGTGCCTGACACCTGGCTTTGGGAAACTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270357.10
3UTR GCA 72 bp AAGACTTTAGATGGCCATGCAGCAGGGGCTGCCAGGTaGCCTCCATACCCGCTTTCACAGGGGTTACTGCAG +
Preference number: 3 (lower is better)
Translates to: KTLDGHAAGAAR*PPYPLSQGLLQ
Trigger: CTGCAGTAACCCCTGTGAAAGCGGGTATGGAGGGCACCTGGCAGCCCCTGCTGCATGGCCATCTAAAGTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270357.10
3UTR TCA 72 bp GGTTTGCAGAGTGGAAGTTTAATGGGACCATCACCGTaGTACCCCATCACAGCAGTCCCAGGCTGGAGGCCC +
Preference number: 3 (lower is better)
Translates to: GLQSGSLMGPSP*YPITAVPGWRP
Trigger: GGGCCTCCAGCCTGGGACTGCTGTGATGGGGTATCACGGTGATGGTCCCATTAAACTTCCACTCTGCAAACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270357.10
3UTR TCA 72 bp TCACCACTGAGGCCGGGATTTGGCTTAAGCCACAGGTaGAGGCCCAGAGTGAAGGTGACACATGGCTTTCCT +
Preference number: 3 (lower is better)
Translates to: SPLRPGFGLSHR*RPRVKVTHGFP
Trigger: AGGAAAGCCATGTGTCACCTTCACTCTGGGCCTTCACCTGTGGCTTAAGCCAAATCCCGGCCTCAGTGGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270357.10
3UTR CCA 72 bp CCATCTTGGGAAAGGATCACCACTGAGGCCGGGATTTaGCTTAAGCCACAGGTGAAGGCCCAGAGTGAAGGT +
Preference number: 3 (lower is better)
Translates to: PSWERITTEAGI*LKPQVKAQSEG
Trigger: ACCTTCACTCTGGGCCTTCACCTGTGGCTTAAGCCAAATCCCGGCCTCAGTGGTGATCCTTTCCCAAGATGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270357.10
3UTR GCA 72 bp GGGTTGAGTGGCCTGTTTTCCTTCACACTGTGTTGCTaGCCTGGGCAGGTGATTCTCAGTTGTGCCTTACCT +
Preference number: 3 (lower is better)
Translates to: GLSGLFSFTLCC*PGQVILSCALP
Trigger: AGGTAAGGCACAACTGAGAATCACCTGCCCAGGGCAGCAACACAGTGTGAAGGAAAACAGGCCACTCAACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270357.10
3UTR CCA 72 bp GCCCCTCAACAGCTCTCTTATCCCTGGCAAGGTGCCTaGAAACATTTGAGATCTCTGTTCATCGGTACGGGT +
Preference number: 3 (lower is better)
Translates to: APQQLSYPWQGA*KHLRSLFIGTG
Trigger: ACCCGTACCGATGAACAGAGATCTCAAATGTTTCCAGGCACCTTGCCAGGGATAAGAGAGCTGTTGAGGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270357.10
3UTR GCA 72 bp TTTGGGTTGAGTGGCCTGTTTTCCTTCACACTGTGTTaGTGCCCTGGGCAGGTGATTCTCAGTTGTGCCTTA +
Preference number: 3 (lower is better)
Translates to: FGLSGLFSFTLC*CPGQVILSCAL
Trigger: TAAGGCACAACTGAGAATCACCTGCCCAGGGCAGCAACACAGTGTGAAGGAAAACAGGCCACTCAACCCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270357.10
3UTR CCA 72 bp TCGCGAGAAAGAGCGCAGGAGATCAGGTTTGCAGAGTaGAAGTTTAATGGGACCATCACCGTGATACCCCAT +
Preference number: 3 (lower is better)
Translates to: SRERAQEIRFAE*KFNGTITVIPH
Trigger: ATGGGGTATCACGGTGATGGTCCCATTAAACTTCCACTCTGCAAACCTGATCTCCTGCGCTCTTTCTCGCGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270357.10
3UTR CCA 72 bp AGAACAGGAAGGAGGGTGAGTGGGACATTTGGTGACTaGGGACTGGACAGTGATGGTATCAGGGTTATTTGC +
Preference number: 3 (lower is better)
Translates to: RTGRRVSGTFGD*GLDSDGIRVIC
Trigger: GCAAATAACCCTGATACCATCACTGTCCAGTCCCCAGTCACCAAATGTCCCACTCACCCTCCTTCCTGTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270357.10
3UTR TCA 72 bp GATGGCAGAGAAACACTCTGGGAGACAAGTCTGGACTaGACCTGTCATGGCCTGAGGGACTTAGAAAACCTT +
Preference number: 3 (lower is better)
Translates to: DGRETLWETSLD*TCHGLRDLENL
Trigger: AAGGTTTTCTAAGTCCCTCAGGCCATGACAGGTTCAGTCCAGACTTGTCTCCCAGAGTGTTTCTCTGCCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270357.10
3UTR CCA 72 bp CCAAAACAAAACATGCCTGTCACCTTGTACCCATCTTaGGAAAGGATCACCACTGAGGCCGGGATTTGGCTT +
Preference number: 3 (lower is better)
Translates to: PKQNMPVTLYPS*ERITTEAGIWL
Trigger: AAGCCAAATCCCGGCCTCAGTGGTGATCCTTTCCCAAGATGGGTACAAGGTGACAGGCATGTTTTGTTTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270357.10
3UTR TCA 72 bp TTTTCTGTTGCCTCTGTCTCAGGTGTAAGTTTGGGTTaGGTGGCCTGTTTTCCTTCACACTGTGTTGCTGCC +
Preference number: 3 (lower is better)
Translates to: FSVASVSGVSLG*VACFPSHCVAA
Trigger: GGCAGCAACACAGTGTGAAGGAAAACAGGCCACTCAACCCAAACTTACACCTGAGACAGAGGCAACAGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270357.10
3UTR CCA 72 bp AACACTCTGGGAGACAAGTCTGGACTGAACCTGTCATaGCCTGAGGGACTTAGAAAACCTTATTTGGACCTC +
Preference number: 3 (lower is better)
Translates to: NTLGDKSGLNLS*PEGLRKPYLDL
Trigger: GAGGTCCAAATAAGGTTTTCTAAGTCCCTCAGGCCATGACAGGTTCAGTCCAGACTTGTCTCCCAGAGTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270357.10
3UTR-3UTR CAA 90 bp CCTGAGGGACTTAGAAAACCTTATTTGGACCTCCAGGGCCTAGAAATTTGCATGAACATGCCTGTCACCTaGTACCCATCTTGGGAAAGG +
Preference number: 3 (lower is better)
Translates to: PEGLRKPYLDLQGLEICMNMPVT*YPSWER
Trigger: CCTTTCCCAAGATGGGTACAAGGTGACAGGCATGTT...CATGCAAATTTCTAGGCCCTGGAGGTCCAAATAAGGTTTTCTAAGTCCCTCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270357.10
CDS-3UTR CCA 90 bp TCCCTGCAAGGAGGCGTGCTGCAGGGACAGCACAGCCTGGGCCCCCGGCAGACACGTGGGCAGGAGGCATaGCTCGGCCCACACGCGGCT +
Preference number: 4 (lower is better)
Translates to: SLQGGVLQGQHSLGPRQTRGQEA*LGPHAA
Trigger: AGCCGCGTGTGGGCCGAGCCATGCCTCCTGCCCACG...TGTCTGCCGGGGGCCCAGGCTGTGCTGTCCCTGCAGCACGCCTCCTTGCAGGGA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000270357.10
CDS-3UTR GCA 90 bp AGGCATGGTGTGTGCGGGCTGGCCCCAGGGCCTGCAGTGCAAGAGAGCTGGGAGCTGAGGCGGGCTCTGTaGTGGAGCCCAGGCCCTGGG +
Preference number: 4 (lower is better)
Translates to: RHGVCGLAPGPAVQESWELRRAL*WSPGPG
Trigger: CCCAGGGCCTGGGCTCCAGCACAGAGCCCGCCTCAG...CTCCCAGCTCTCTTGCACTGCAGGCCCTGGGGCCAGCCCGCACACACCATGCCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270357.10
ENST00000437406.1
CDS-3UTR TCA 90 bp ATTAAGGCACAGTGTGGCGGTCACCATAGGGCTGCTGGGGCCCTTGCCCCGGGGCTGCCAGGGGCCAACTaGGGCTGCCAACCCCAGGGG +
Preference number: 4 (lower is better)
Translates to: IKAQCGGHHRAAGALAPGLPGAN*GCQPQG
Trigger: CCCCTGGGGTTGGCAGCCTCAGTTGGCCCCTGGCAG...CCCCGGGGCAAGGGCCCCAGCAGCCCTATGGTGACCGCCACACTGTGCCTTAAT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 2 transcripts:
ENST00000270357.10
ENST00000437406.1
CDS-3UTR GCA 90 bp CAGGAGGCATGGTGTGTGCGGGCTGGCCCCAGGGCCTGCAGTGCAAGAGAGCTGCCTGGGCCCGATGTCTaGCGGCTTGAGGTCTCCGGC +
Preference number: 4 (lower is better)
Translates to: QEAWCVRAGPRACSARELPGPDV*RLEVSG
Trigger: GCCGGAGACCTCAAGCCGGCAGACATCGGGCCCAGG...CAGCTCTCTTGCACTGCAGGCCCTGGGGCCAGCCCGCACACACCATGCCTCCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270357.10
CDS-3UTR GCA 90 bp CAGGAGGCATGGTGTGTGCGGGCTGGCCCCAGGGCCTGCAGTGCAAGAGAGCTGCCTTGCCCAGCTCCGTaGTGGGCTCTGAGGCGGGCT +
Preference number: 4 (lower is better)
Translates to: QEAWCVRAGPRACSARELPCPAP*WALRRA
Trigger: AGCCCGCCTCAGAGCCCAGCACGGAGCTGGGCAAGG...CAGCTCTCTTGCACTGCAGGCCCTGGGGCCAGCCCGCACACACCATGCCTCCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270357.10
ENST00000437406.1
CDS-3UTR CCA 90 bp ATTAAGGCACAGTGTGGCGGTCACCATAGGGCTGCTGGGGCCCTTGCCCCGGGGGGGGCTAAGGTTGCCTaGGGCCAGAGGGCCCTCCCC +
Preference number: 4 (lower is better)
Translates to: IKAQCGGHHRAAGALAPGGAKVA*GQRALP
Trigger: GGGGAGGGCCCTCTGGCCCCAGGCAACCTTAGCCCC...CCCCGGGGCAAGGGCCCCAGCAGCCCTATGGTGACCGCCACACTGTGCCTTAAT
69% GC, longest homopolymer 8 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000270357.10
ENST00000437406.1
CDS-3UTR CCA 90 bp TCCCTGCAAGGAGGCGTGCTGCAGGGACAGCACAGCCTGGGCCCCCGGCAGACACCGCCTCTCCCAGCATaGTGGGCCTGGAGAGAGCAC +
Preference number: 4 (lower is better)
Translates to: SLQGGVLQGQHSLGPRQTPPLPA*WAWREH
Trigger: GTGCTCTCTCCAGGCCCACCATGCTGGGAGAGGCGG...TGTCTGCCGGGGGCCCAGGCTGTGCTGTCCCTGCAGCACGCCTCCTTGCAGGGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000270357.10
ENST00000437406.1
CDS-3UTR TCA 90 bp ACATTAAGGCACAGTGTGGCGGTCACCATAGGGCTGCTGGGGCCCTTGCCCCGGCTGCCAGGGGCCAACTaGGGCTGCCAACCCCAGGGG +
Preference number: 4 (lower is better)
Translates to: TLRHSVAVTIGLLGPLPRLPGAN*GCQPQG
Trigger: CCCCTGGGGTTGGCAGCCTCAGTTGGCCCCTGGCAG...CCGGGGCAAGGGCCCCAGCAGCCCTATGGTGACCGCCACACTGTGCCTTAATGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000270357.10
ENST00000437406.1
CDS-3UTR GCA 90 bp GGCAGGTGCTGGCATCCGGGGCTAGGCACAGCTGTCAGTGTTGAGACAGGAGGCCGGAAGGCGGCTGAGTaGAGGCGCAGAGCCGGGTGC +
Preference number: 4 (lower is better)
Translates to: GRCWHPGLGTAVSVETGGRKAAE*RRRAGC
Trigger: GCACCCGGCTCTGCGCCTGCACTCAGCCGCCTTCCG...GCCTCCTGTCTCAACACTGACAGCTGTGCCTAGCCCCGGATGCCAGCACCTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270357.10
CDS-3UTR GCA 90 bp AGGCATGGTGTGTGCGGGCTGGCCCCAGGGCCTGCAGTGCAAGAGAGCTGGGAGGCTGGCCGAGGCAGCTaGCTGGTCCAGAGGTTCTGC +
Preference number: 4 (lower is better)
Translates to: RHGVCGLAPGPAVQESWEAGRGS*LVQRFC
Trigger: GCAGAACCTCTGGACCAGGCAGCTGCCTCGGCCAGC...CTCCCAGCTCTCTTGCACTGCAGGCCCTGGGGCCAGCCCGCACACACCATGCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270357.10
ENST00000437406.1
CDS-3UTR GCA 90 bp GGCAGGTGCTGGCATCCGGGGCTAGGCACAGCTGTCAGTGTTGAGACAGGAGGCCTGCGCAGGTTGGGGTaGAGCCGGCCCTGCGTCTGG +
Preference number: 4 (lower is better)
Translates to: GRCWHPGLGTAVSVETGGLRRLG*SRPCVW
Trigger: CCAGACGCAGGGCCGGCTGCACCCCAACCTGCGCAG...GCCTCCTGTCTCAACACTGACAGCTGTGCCTAGCCCCGGATGCCAGCACCTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000270357.10
ENST00000437406.1
CDS-3UTR GCA 90 bp TCCCTGCAAGGAGGCGTGCTGCAGGGACAGCACAGCCTGGGCCCCCGGCAGACAGGTGGCTCAGATCCCTaGAAGGAGGCGTGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: SLQGGVLQGQHSLGPRQTGGSDP*KEACCR
Trigger: CCTGCAGCACGCCTCCTTGCAGGGATCTGAGCCACC...TGTCTGCCGGGGGCCCAGGCTGTGCTGTCCCTGCAGCACGCCTCCTTGCAGGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000270357.10
ENST00000437406.1
CDS-3UTR CCA 90 bp AGGCATGGTGTGTGCGGGCTGGCCCCAGGGCCTGCAGTGCAAGAGAGCTGGGAGAGCACTGCGCGGCCATaGCCGCCGGCACTAGGTGAA +
Preference number: 4 (lower is better)
Translates to: RHGVCGLAPGPAVQESWESTARP*PPALGE
Trigger: TTCACCTAGTGCCGGCGGCCATGGCCGCGCAGTGCT...CTCCCAGCTCTCTTGCACTGCAGGCCCTGGGGCCAGCCCGCACACACCATGCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270357.10
CDS-3UTR CCA 90 bp AGGCATGGTGTGTGCGGGCTGGCCCCAGGGCCTGCAGTGCAAGAGAGCTGGGAGATGACCTGGAAGGGCTaGTGCGCCTGCAGCTCGGGC +
Preference number: 4 (lower is better)
Translates to: RHGVCGLAPGPAVQESWEMTWKG*CACSSG
Trigger: GCCCGAGCTGCAGGCGCACCAGCCCTTCCAGGTCAT...CTCCCAGCTCTCTTGCACTGCAGGCCCTGGGGCCAGCCCGCACACACCATGCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270357.10
CDS-3UTR CCA 90 bp GCACCACCTCCCACTTTCCCTGGGGTATTGCTTTGCCCCTGTGCCTCCCACCCCTGGCTCTGCGCAGGTTaGGGTGCAGCCGGCCCTGCG +
Preference number: 4 (lower is better)
Translates to: APPPTFPGVLLCPCASHPWLCAG*GAAGPA
Trigger: CGCAGGGCCGGCTGCACCCCAACCTGCGCAGAGCCA...GGGGTGGGAGGCACAGGGGCAAAGCAATACCCCAGGGAAAGTGGGAGGTGGTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000270357.10
ENST00000437406.1
CDS-3UTR CCA 90 bp TCCCTGCAAGGAGGCGTGCTGCAGGGACAGCACAGCCTGGGCCCCCGGCAGACAGCCCTCCCCACTTCCTaGCTGCCATGTGTGGAGTGG +
Preference number: 4 (lower is better)
Translates to: SLQGGVLQGQHSLGPRQTALPTS*LPCVEW
Trigger: CCACTCCACACATGGCAGCCAGGAAGTGGGGAGGGC...TGTCTGCCGGGGGCCCAGGCTGTGCTGTCCCTGCAGCACGCCTCCTTGCAGGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000270357.10
CDS-3UTR TCA 90 bp GTGTTGAGACAGGAGGCATGGTGTGTGCGGGCTGGCCCCAGGGCCTGCAGTGCAGTCAGGCTGGATCCCTaGGACAGGTCCGGCTCAGCC +
Preference number: 4 (lower is better)
Translates to: VLRQEAWCVRAGPRACSAVRLDP*DRSGSA
Trigger: GGCTGAGCCGGACCTGTCTCAGGGATCCAGCCTGAC...TGCACTGCAGGCCCTGGGGCCAGCCCGCACACACCATGCCTCCTGTCTCAACAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270357.10
ENST00000437406.1
CDS-3UTR TCA 90 bp GTGTTGAGACAGGAGGCATGGTGTGTGCGGGCTGGCCCCAGGGCCTGCAGTGCACCAGCGCGAAGGACTTaGGGGCACCGGTGCAGAGGT +
Preference number: 4 (lower is better)
Translates to: VLRQEAWCVRAGPRACSAPARRT*GHRCRG
Trigger: ACCTCTGCACCGGTGCCCTCAAGTCCTTCGCGCTGG...TGCACTGCAGGCCCTGGGGCCAGCCCGCACACACCATGCCTCCTGTCTCAACAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000270357.10
ENST00000437406.1
CDS-3UTR TCA 90 bp GGCAGGTGCTGGCATCCGGGGCTAGGCACAGCTGTCAGTGTTGAGACAGGAGGCCTCCGTGCTGGGCTCTaGGGCGGGCTCTGTGCTGGA +
Preference number: 4 (lower is better)
Translates to: GRCWHPGLGTAVSVETGGLRAGL*GGLCAG
Trigger: TCCAGCACAGAGCCCGCCTCAGAGCCCAGCACGGAG...GCCTCCTGTCTCAACACTGACAGCTGTGCCTAGCCCCGGATGCCAGCACCTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270357.10
ENST00000437406.1
CDS-3UTR GCA 90 bp GCCCCAGACCCTAGACCAGAGTTGCCACCGCCACTGGAGGGGACTCATATGTCCCTGCGCAGGTTGGGGTaGAGCCGGCCCTGCGTCTGG +
Preference number: 4 (lower is better)
Translates to: APDPRPELPPPLEGTHMSLRRLG*SRPCVW
Trigger: CCAGACGCAGGGCCGGCTGCACCCCAACCTGCGCAG...GGACATATGAGTCCCCTCCAGTGGCGGTGGCAACTCTGGTCTAGGGTCTGGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000270357.10
CDS-3UTR GCA 90 bp AGGGGCAGTGGCAGTCTTCTAGTTCCTAGGTCTCTGGATGGGGTGGCGCCTCCCCTGAGGCGGGCTCTGTaGTGGAGCCCAGGCCCTGGG +
Preference number: 4 (lower is better)
Translates to: RGSGSLLVPRSLDGVAPPLRRAL*WSPGPG
Trigger: CCCAGGGCCTGGGCTCCAGCACAGAGCCCGCCTCAG...GGGAGGCGCCACCCCATCCAGAGACCTAGGAACTAGAAGACTGCCACTGCCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000270357.10
CDS-3UTR GCA 90 bp TCCCTGCAAGGAGGCGTGCTGCAGGGACAGCACAGCCTGGGCCCCCGGCAGACATGTCTGCTTCAGCCTTaGCCAGCTCCGTGCTGGGCT +
Preference number: 4 (lower is better)
Translates to: SLQGGVLQGQHSLGPRQTCLLQP*PAPCWA
Trigger: AGCCCAGCACGGAGCTGGGCAAGGCTGAAGCAGACA...TGTCTGCCGGGGGCCCAGGCTGTGCTGTCCCTGCAGCACGCCTCCTTGCAGGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000270357.10
ENST00000437406.1
CDS-3UTR GCA 90 bp ATTAAGGCACAGTGTGGCGGTCACCATAGGGCTGCTGGGGCCCTTGCCCCGGGGGGTGTCAGGCACAGGTaGGCAGCTCAGCAGCGTCCG +
Preference number: 4 (lower is better)
Translates to: IKAQCGGHHRAAGALAPGGVRHR*AAQQRP
Trigger: CGGACGCTGCTGAGCTGCGCACCTGTGCCTGACACC...CCCCGGGGCAAGGGCCCCAGCAGCCCTATGGTGACCGCCACACTGTGCCTTAAT
67% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000270357.10
CDS-3UTR CCA 90 bp GCACCACCTCCCACTTTCCCTGGGGTATTGCTTTGCCCCTGTGCCTCCCACCCCGGAAGAGCTGCGCGCTaGAGGCCGAGGCCACGTCCA +
Preference number: 4 (lower is better)
Translates to: APPPTFPGVLLCPCASHPGRAAR*RPRPRP
Trigger: TGGACGTGGCCTCGGCCTCCAGCGCGCAGCTCTTCC...GGGGTGGGAGGCACAGGGGCAAAGCAATACCCCAGGGAAAGTGGGAGGTGGTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000270357.10
CDS-3UTR CCA 90 bp GTGTTGAGACAGGAGGCATGGTGTGTGCGGGCTGGCCCCAGGGCCTGCAGTGCACCGACAGCTTGCTGGTaGCCGTGGGCAGGAGGCATG +
Preference number: 4 (lower is better)
Translates to: VLRQEAWCVRAGPRACSAPTACW*PWAGGM
Trigger: CATGCCTCCTGCCCACGGCCACCAGCAAGCTGTCGG...TGCACTGCAGGCCCTGGGGCCAGCCCGCACACACCATGCCTCCTGTCTCAACAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270357.10
CDS-3UTR CCA 90 bp AGGCATGGTGTGTGCGGGCTGGCCCCAGGGCCTGCAGTGCAAGAGAGCTGGGAGGAGAGATGGCACTGCTaGGGGCCTCGTCCCCAAGCA +
Preference number: 4 (lower is better)
Translates to: RHGVCGLAPGPAVQESWEERWHC*GPRPQA
Trigger: TGCTTGGGGACGAGGCCCCCAGCAGTGCCATCTCTC...CTCCCAGCTCTCTTGCACTGCAGGCCCTGGGGCCAGCCCGCACACACCATGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000270357.10
ENST00000437406.1
CDS-3UTR CCA 90 bp GCCCCAGACCCTAGACCAGAGTTGCCACCGCCACTGGAGGGGACTCATATGTCCGGGGCTAAGGTTGCCTaGGGCCAGAGGGCCCTCCCC +
Preference number: 4 (lower is better)
Translates to: APDPRPELPPPLEGTHMSGAKVA*GQRALP
Trigger: GGGGAGGGCCCTCTGGCCCCAGGCAACCTTAGCCCC...GGACATATGAGTCCCCTCCAGTGGCGGTGGCAACTCTGGTCTAGGGTCTGGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000270357.10
CDS-3UTR CCA 90 bp CAGGAGGCATGGTGTGTGCGGGCTGGCCCCAGGGCCTGCAGTGCAAGAGAGCTGCCAGCATGGTGGGCCTaGAGAGAGCACCAGCACCAC +
Preference number: 4 (lower is better)
Translates to: QEAWCVRAGPRACSARELPAWWA*REHQHH
Trigger: GTGGTGCTGGTGCTCTCTCCAGGCCCACCATGCTGG...CAGCTCTCTTGCACTGCAGGCCCTGGGGCCAGCCCGCACACACCATGCCTCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270357.10
ENST00000437406.1
CDS-3UTR CCA 90 bp AGGCATGGTGTGTGCGGGCTGGCCCCAGGGCCTGCAGTGCAAGAGAGCTGGGAGCCTCTCCCAGCATGGTaGGCCTGGAGAGAGCACCAG +
Preference number: 4 (lower is better)
Translates to: RHGVCGLAPGPAVQESWEPLPAW*AWREHQ
Trigger: CTGGTGCTCTCTCCAGGCCCACCATGCTGGGAGAGG...CTCCCAGCTCTCTTGCACTGCAGGCCCTGGGGCCAGCCCGCACACACCATGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270357.10
ENST00000437406.1
CDS-3UTR TCA 90 bp GGCAGGTGCTGGCATCCGGGGCTAGGCACAGCTGTCAGTGTTGAGACAGGAGGCGTCAGGCTGGATCCCTaGGACAGGTCCGGCTCAGCC +
Preference number: 4 (lower is better)
Translates to: GRCWHPGLGTAVSVETGGVRLDP*DRSGSA
Trigger: GGCTGAGCCGGACCTGTCTCAGGGATCCAGCCTGAC...GCCTCCTGTCTCAACACTGACAGCTGTGCCTAGCCCCGGATGCCAGCACCTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270357.10
ENST00000437406.1
CDS-3UTR TCA 90 bp GGCAGGTGCTGGCATCCGGGGCTAGGCACAGCTGTCAGTGTTGAGACAGGAGGCCCAGCGCGAAGGACTTaGGGGCACCGGTGCAGAGGT +
Preference number: 4 (lower is better)
Translates to: GRCWHPGLGTAVSVETGGPARRT*GHRCRG
Trigger: ACCTCTGCACCGGTGCCCTCAAGTCCTTCGCGCTGG...GCCTCCTGTCTCAACACTGACAGCTGTGCCTAGCCCCGGATGCCAGCACCTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000270357.10
ENST00000437406.1
CDS-3UTR TCA 90 bp GCCCCAGACCCTAGACCAGAGTTGCCACCGCCACTGGAGGGGACTCATATGTCCCTCCGTGCTGGGCTCTaGGGCGGGCTCTGTGCTGGA +
Preference number: 4 (lower is better)
Translates to: APDPRPELPPPLEGTHMSLRAGL*GGLCAG
Trigger: TCCAGCACAGAGCCCGCCTCAGAGCCCAGCACGGAG...GGACATATGAGTCCCCTCCAGTGGCGGTGGCAACTCTGGTCTAGGGTCTGGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270357.10
CDS-3UTR TCA 90 bp AGGCATGGTGTGTGCGGGCTGGCCCCAGGGCCTGCAGTGCAAGAGAGCTGGGAGTGGGACTCCCTGTTCTaGGGGGCTAAGGTTGCCTGG +
Preference number: 4 (lower is better)
Translates to: RHGVCGLAPGPAVQESWEWDSLF*GAKVAW
Trigger: CCAGGCAACCTTAGCCCCTCAGAACAGGGAGTCCCA...CTCCCAGCTCTCTTGCACTGCAGGCCCTGGGGCCAGCCCGCACACACCATGCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000270357.10
ENST00000437406.1
CDS-3UTR TCA 90 bp TCCCTGCAAGGAGGCGTGCTGCAGGGACAGCACAGCCTGGGCCCCCGGCAGACAGGCTTAAGCCACAGGTaGAGGCCCAGAGTGAAGGTG +
Preference number: 4 (lower is better)
Translates to: SLQGGVLQGQHSLGPRQTGLSHR*RPRVKV
Trigger: CACCTTCACTCTGGGCCTTCACCTGTGGCTTAAGCC...TGTCTGCCGGGGGCCCAGGCTGTGCTGTCCCTGCAGCACGCCTCCTTGCAGGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000270357.10
CDS-3UTR TCA 90 bp CAGGAGGCATGGTGTGTGCGGGCTGGCCCCAGGGCCTGCAGTGCAAGAGAGCTGGCTGGGCACTGCTGCTaGGTTTCCCAAAGCCAGGTG +
Preference number: 4 (lower is better)
Translates to: QEAWCVRAGPRACSARELAGHCC*VSQSQV
Trigger: CACCTGGCTTTGGGAAACTCAGCAGCAGTGCCCAGC...CAGCTCTCTTGCACTGCAGGCCCTGGGGCCAGCCCGCACACACCATGCCTCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270357.10
CDS-3UTR TCA 90 bp TCCCTGCAAGGAGGCGTGCTGCAGGGACAGCACAGCCTGGGCCCCCGGCAGACACTTCCACTGCCAGTGTaGGCCCCTCAACAGCTCTCT +
Preference number: 4 (lower is better)
Translates to: SLQGGVLQGQHSLGPRQTLPLPV*APQQLS
Trigger: AGAGAGCTGTTGAGGGGCTCACACTGGCAGTGGAAG...TGTCTGCCGGGGGCCCAGGCTGTGCTGTCCCTGCAGCACGCCTCCTTGCAGGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000270357.10
CDS-3UTR GCA 90 bp CACAGAAGGCACAATTGTGGTGTCTGGGAGGTCGAGGGTCAGCCCGCCAACAGGAAGGGCTGGTGCGCCTaGAGCTCGGGCGGCAGCGTG +
Preference number: 4 (lower is better)
Translates to: HRRHNCGVWEVEGQPANRKGWCA*SSGGSV
Trigger: CACGCTGCCGCCCGAGCTGCAGGCGCACCAGCCCTT...CCTGTTGGCGGGCTGACCCTCGACCTCCCAGACACCACAATTGTGCCTTCTGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270357.10
CDS-3UTR GCA 90 bp GGTGTGAGGGGCAGTGGCAGTCTTCTAGTTCCTAGGTCTCTGGATGGGGTGGCGACCTGGAAGGGCTGGTaGGCCTGCAGCTCGGGCGGC +
Preference number: 4 (lower is better)
Translates to: GVRGSGSLLVPRSLDGVATWKGW*ACSSGG
Trigger: GCCGCCCGAGCTGCAGGCGCACCAGCCCTTCCAGGT...CGCCACCCCATCCAGAGACCTAGGAACTAGAAGACTGCCACTGCCCCTCACACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270357.10
CDS-3UTR GCA 90 bp CAGGAGGCATGGTGTGTGCGGGCTGGCCCCAGGGCCTGCAGTGCAAGAGAGCTGTGTCTGCTTCAGCCTTaGCCAGCTCCGTGCTGGGCT +
Preference number: 4 (lower is better)
Translates to: QEAWCVRAGPRACSARELCLLQP*PAPCWA
Trigger: AGCCCAGCACGGAGCTGGGCAAGGCTGAAGCAGACA...CAGCTCTCTTGCACTGCAGGCCCTGGGGCCAGCCCGCACACACCATGCCTCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270357.10
ENST00000437406.1
CDS-3UTR GCA 90 bp AGGCATGGTGTGTGCGGGCTGGCCCCAGGGCCTGCAGTGCAAGAGAGCTGGGAGACCCTAGACCAGAGTTaGCACCGCCACTGGAGGGGA +
Preference number: 4 (lower is better)
Translates to: RHGVCGLAPGPAVQESWETLDQS*HRHWRG
Trigger: TCCCCTCCAGTGGCGGTGGCAACTCTGGTCTAGGGT...CTCCCAGCTCTCTTGCACTGCAGGCCCTGGGGCCAGCCCGCACACACCATGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270357.10
CDS-3UTR CCA 90 bp TGGGCACTGCTGCTGAGTTTCCCAAAGCCAGGTGTCAGGCACAGGTGCGCAGCTGGTCCAGCCACCAGATaGCGGGGGCGTCGGTCGAGG +
Preference number: 4 (lower is better)
Translates to: WALLLSFPKPGVRHRCAAGPATR*RGRRSR
Trigger: CCTCGACCGACGCCCCCGCCATCTGGTGGCTGGACC...AGCTGCGCACCTGTGCCTGACACCTGGCTTTGGGAAACTCAGCAGCAGTGCCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000270357.10
CDS-3UTR CCA 90 bp CAGGAGGCATGGTGTGTGCGGGCTGGCCCCAGGGCCTGCAGTGCAAGAGAGCTGCACACGGAGTGGCCCTaGGTGAAGACGAAGGGCTTG +
Preference number: 4 (lower is better)
Translates to: QEAWCVRAGPRACSARELHTEWP*VKTKGL
Trigger: CAAGCCCTTCGTCTTCACCCAGGGCCACTCCGTGTG...CAGCTCTCTTGCACTGCAGGCCCTGGGGCCAGCCCGCACACACCATGCCTCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270357.10
CDS-3UTR CCA 90 bp AGGCATGGTGTGTGCGGGCTGGCCCCAGGGCCTGCAGTGCAAGAGAGCTGGGAGCGGTTGCACACGGAGTaGCCCTGGGTGAAGACGAAG +
Preference number: 4 (lower is better)
Translates to: RHGVCGLAPGPAVQESWERLHTE*PWVKTK
Trigger: CTTCGTCTTCACCCAGGGCCACTCCGTGTGCAACCG...CTCCCAGCTCTCTTGCACTGCAGGCCCTGGGGCCAGCCCGCACACACCATGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270357.10
CDS-3UTR CCA 90 bp GCATGTTGGCCAGGTGTGCGTGGCACTGAGATGGTGGCGCCACATCCTTGGGGAGCTTGCTGGTGGCCGTaGGCAGGAGGCATGGCTCGG +
Preference number: 4 (lower is better)
Translates to: ACWPGVRGTEMVAPHPWGACWWP*AGGMAR
Trigger: CCGAGCCATGCCTCCTGCCCACGGCCACCAGCAAGC...TCCCCAAGGATGTGGCGCCACCATCTCAGTGCCACGCACACCTGGCCAACATGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270357.10
CDS-3UTR CCA 90 bp ATTAAGGCACAGTGTGGCGGTCACCATAGGGCTGCTGGGGCCCTTGCCCCGGGGGAGTCCAGCAGGTCCTaGGCCACCACGCTGGTGAAC +
Preference number: 4 (lower is better)
Translates to: IKAQCGGHHRAAGALAPGESSRS*ATTLVN
Trigger: GTTCACCAGCGTGGTGGCCCAGGACCTGCTGGACTC...CCCCGGGGCAAGGGCCCCAGCAGCCCTATGGTGACCGCCACACTGTGCCTTAAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000270357.10
ENST00000437406.1
CDS-3UTR CCA 90 bp GTGTTGAGACAGGAGGCATGGTGTGTGCGGGCTGGCCCCAGGGCCTGCAGTGCAGAGTCCAGCAGGTCCTaGGCCACCACGCTGGTGAAC +
Preference number: 4 (lower is better)
Translates to: VLRQEAWCVRAGPRACSAESSRS*ATTLVN
Trigger: GTTCACCAGCGTGGTGGCCCAGGACCTGCTGGACTC...TGCACTGCAGGCCCTGGGGCCAGCCCGCACACACCATGCCTCCTGTCTCAACAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270357.10
ENST00000437406.1
CDS-3UTR CCA 90 bp ATTAAGGCACAGTGTGGCGGTCACCATAGGGCTGCTGGGGCCCTTGCCCCGGGGTCTGCGGTCCACAGCTaGAAAAGGGCCTCCACGGGC +
Preference number: 4 (lower is better)
Translates to: IKAQCGGHHRAAGALAPGSAVHS*KRASTG
Trigger: GCCCGTGGAGGCCCTTTTCCAGCTGTGGACCGCAGA...CCCCGGGGCAAGGGCCCCAGCAGCCCTATGGTGACCGCCACACTGTGCCTTAAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000270357.10
ENST00000437406.1
CDS-3UTR CCA 90 bp ACATTAAGGCACAGTGTGGCGGTCACCATAGGGCTGCTGGGGCCCTTGCCCCGGGCCGAGGCAGCTGCCTaGTCCAGAGGTTCTGCGGTC +
Preference number: 4 (lower is better)
Translates to: TLRHSVAVTIGLLGPLPRAEAAA*SRGSAV
Trigger: GACCGCAGAACCTCTGGACCAGGCAGCTGCCTCGGC...CCGGGGCAAGGGCCCCAGCAGCCCTATGGTGACCGCCACACTGTGCCTTAATGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000270357.10
ENST00000437406.1
CDS-3UTR CCA 90 bp CAGGAGGCATGGTGTGTGCGGGCTGGCCCCAGGGCCTGCAGTGCAAGAGAGCTGAGATGTCAATGGCGCTaGCCGAGGCAGCTGCCTGGT +
Preference number: 4 (lower is better)
Translates to: QEAWCVRAGPRACSARELRCQWR*PRQLPG
Trigger: ACCAGGCAGCTGCCTCGGCCAGCGCCATTGACATCT...CAGCTCTCTTGCACTGCAGGCCCTGGGGCCAGCCCGCACACACCATGCCTCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270357.10
ENST00000437406.1
CDS-3UTR CCA 90 bp CACAGAAGGCACAATTGTGGTGTCTGGGAGGTCGAGGGTCAGCCCGCCAACAGGTGGCTCTGCGCAGGTTaGGGTGCAGCCGGCCCTGCG +
Preference number: 4 (lower is better)
Translates to: HRRHNCGVWEVEGQPANRWLCAG*GAAGPA
Trigger: CGCAGGGCCGGCTGCACCCCAACCTGCGCAGAGCCA...CCTGTTGGCGGGCTGACCCTCGACCTCCCAGACACCACAATTGTGCCTTCTGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270357.10
ENST00000437406.1
CDS-3UTR CCA 90 bp GTGTTGAGACAGGAGGCATGGTGTGTGCGGGCTGGCCCCAGGGCCTGCAGTGCAAGGGGCTTGTGGGCCTaGGCAGAGCTCATGGCCAGA +
Preference number: 4 (lower is better)
Translates to: VLRQEAWCVRAGPRACSARGLWA*AELMAR
Trigger: TCTGGCCATGAGCTCTGCCCAGGCCCACAAGCCCCT...TGCACTGCAGGCCCTGGGGCCAGCCCGCACACACCATGCCTCCTGTCTCAACAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000270357.10
ENST00000437406.1
CDS-3UTR CCA 90 bp GCCCCAGACCCTAGACCAGAGTTGCCACCGCCACTGGAGGGGACTCATATGTCCATGGTGTGTGCGGGCTaGCCCCAGGGCCTGCAGTGC +
Preference number: 4 (lower is better)
Translates to: APDPRPELPPPLEGTHMSMVCAG*PQGLQC
Trigger: GCACTGCAGGCCCTGGGGCCAGCCCGCACACACCAT...GGACATATGAGTCCCCTCCAGTGGCGGTGGCAACTCTGGTCTAGGGTCTGGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000270357.10
CDS-3UTR CCA 90 bp GCACCACCTCCCACTTTCCCTGGGGTATTGCTTTGCCCCTGTGCCTCCCACCCCGCACCTGGCAGGTGCTaGCATCCGGGGCTAGGCACA +
Preference number: 4 (lower is better)
Translates to: APPPTFPGVLLCPCASHPAPGRC*HPGLGT
Trigger: TGTGCCTAGCCCCGGATGCCAGCACCTGCCAGGTGC...GGGGTGGGAGGCACAGGGGCAAAGCAATACCCCAGGGAAAGTGGGAGGTGGTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000270357.10
ENST00000437406.1
CDS-3UTR CCA 90 bp GCACCACCTCCCACTTTCCCTGGGGTATTGCTTTGCCCCTGTGCCTCCCACCCCCCGCCTCTCCCAGCATaGTGGGCCTGGAGAGAGCAC +
Preference number: 4 (lower is better)
Translates to: APPPTFPGVLLCPCASHPPPLPA*WAWREH
Trigger: GTGCTCTCTCCAGGCCCACCATGCTGGGAGAGGCGG...GGGGTGGGAGGCACAGGGGCAAAGCAATACCCCAGGGAAAGTGGGAGGTGGTGC
66% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000270357.10
ENST00000437406.1
CDS-3UTR GCA 90 bp CAGAGCCGAGACGCAGTCATGGCAGGCCTGGCCCACAGAAGGCACAATTGTGGTCTGCGCCCGACAGCTTaGTGGTGGCCGTGGGCAGGA +
Preference number: 4 (lower is better)
Translates to: QSRDAVMAGLAHRRHNCGLRPTA*WWPWAG
Trigger: TCCTGCCCACGGCCACCAGCAAGCTGTCGGGCGCAG...ACCACAATTGTGCCTTCTGTGGGCCAGGCCTGCCATGACTGCGTCTCGGCTCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270357.10
CDS-3UTR GCA 90 bp GGCAGGTGCTGGCATCCGGGGCTAGGCACAGCTGTCAGTGTTGAGACAGGAGGCAGCTTCATCTGCCGGTaGAGGGCGTCCAGGCGGAAG +
Preference number: 4 (lower is better)
Translates to: GRCWHPGLGTAVSVETGGSFICR*RASRRK
Trigger: CTTCCGCCTGGACGCCCTGCACCGGCAGATGAAGCT...GCCTCCTGTCTCAACACTGACAGCTGTGCCTAGCCCCGGATGCCAGCACCTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270357.10
CDS-3UTR GCA 90 bp GCACCACCTCCCACTTTCCCTGGGGTATTGCTTTGCCCCTGTGCCTCCCACCCCCGGCAGTCCACGCTCTaGTCCTTCAGCTCCGGGAAG +
Preference number: 4 (lower is better)
Translates to: APPPTFPGVLLCPCASHPRQSTL*SFSSGK
Trigger: CTTCCCGGAGCTGAAGGAGCAGAGCGTGGACTGCCG...GGGGTGGGAGGCACAGGGGCAAAGCAATACCCCAGGGAAAGTGGGAGGTGGTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000270357.10
ENST00000437406.1
CDS-3UTR GCA 90 bp CAGGAGGCATGGTGTGTGCGGGCTGGCCCCAGGGCCTGCAGTGCAAGAGAGCTGTCTGCAGCCAGCGGATaGGGATCTCAGCGTTCATCG +
Preference number: 4 (lower is better)
Translates to: QEAWCVRAGPRACSARELSAASG*GSQRSS
Trigger: CGATGAACGCTGAGATCCGCATCCGCTGGCTGCAGA...CAGCTCTCTTGCACTGCAGGCCCTGGGGCCAGCCCGCACACACCATGCCTCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270357.10
ENST00000437406.1
CDS-3UTR GCA 90 bp AGGCATGGTGTGTGCGGGCTGGCCCCAGGGCCTGCAGTGCAAGAGAGCTGGGAGGTGTCCTTGTTCCTCTaGCAGGGGCCAACTGAGGCT +
Preference number: 4 (lower is better)
Translates to: RHGVCGLAPGPAVQESWEVSLFL*QGPTEA
Trigger: AGCCTCAGTTGGCCCCTGGCAGAGGAACAAGGACAC...CTCCCAGCTCTCTTGCACTGCAGGCCCTGGGGCCAGCCCGCACACACCATGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000270357.10
ENST00000437406.1
CDS-3UTR GCA 90 bp GAGTTTCCCAAAGCCAGGTGTCAGGCACAGGTGCGCAGCTCAGCAGCGTCCGGACCATGCAGCAGGGGCTaGCAGGTGCCCTCCATACCC +
Preference number: 4 (lower is better)
Translates to: EFPKARCQAQVRSSAASGPCSRG*QVPSIP
Trigger: GGGTATGGAGGGCACCTGGCAGCCCCTGCTGCATGG...TCCGGACGCTGCTGAGCTGCGCACCTGTGCCTGACACCTGGCTTTGGGAAACTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270357.10
CDS-3UTR CCA 90 bp AGACGTGCTGCTTCTGGGCCACGGCATGTTGGCCAGGTGTGCGTGGCACTGAGACACCTGCACCCCCGATaGCGCCTTGACGACGGCAGA +
Preference number: 4 (lower is better)
Translates to: RRAASGPRHVGQVCVALRHLHPR*RLDDGR
Trigger: TCTGCCGTCGTCAAGGCGCCATCGGGGGTGCAGGTG...TCTCAGTGCCACGCACACCTGGCCAACATGCCGTGGCCCAGAAGCAGCACGTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000270357.10
CDS-3UTR CCA 90 bp CAGAGCCGAGACGCAGTCATGGCAGGCCTGGCCCACAGAAGGCACAATTGTGGTCGGGCCGGGTCAGGCTaGATCCCTGAGACAGGTCCG +
Preference number: 4 (lower is better)
Translates to: QSRDAVMAGLAHRRHNCGRAGSG*IPETGP
Trigger: CGGACCTGTCTCAGGGATCCAGCCTGACCCGGCCCG...ACCACAATTGTGCCTTCTGTGGGCCAGGCCTGCCATGACTGCGTCTCGGCTCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270357.10
ENST00000437406.1
CDS-3UTR CCA 90 bp AGACGTGCTGCTTCTGGGCCACGGCATGTTGGCCAGGTGTGCGTGGCACTGAGAGCCGAGGCAGCTGCCTaGTCCAGAGGTTCTGCGGTC +
Preference number: 4 (lower is better)
Translates to: RRAASGPRHVGQVCVALRAEAAA*SRGSAV
Trigger: GACCGCAGAACCTCTGGACCAGGCAGCTGCCTCGGC...TCTCAGTGCCACGCACACCTGGCCAACATGCCGTGGCCCAGAAGCAGCACGTCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270357.10
CDS-3UTR CCA 90 bp AGGCATGGTGTGTGCGGGCTGGCCCCAGGGCCTGCAGTGCAAGAGAGCTGGGAGTGGGACAGGATCTGCTaGATGGCTCTGCGCAGGTTG +
Preference number: 4 (lower is better)
Translates to: RHGVCGLAPGPAVQESWEWDRIC*MALRRL
Trigger: CAACCTGCGCAGAGCCATCCAGCAGATCCTGTCCCA...CTCCCAGCTCTCTTGCACTGCAGGCCCTGGGGCCAGCCCGCACACACCATGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270357.10
ENST00000437406.1
CDS-3UTR CCA 90 bp GCACCACCTCCCACTTTCCCTGGGGTATTGCTTTGCCCCTGTGCCTCCCACCCCCTGGAGCCCAGGCCCTaGGACAGGATCTGCTGGATG +
Preference number: 4 (lower is better)
Translates to: APPPTFPGVLLCPCASHPLEPRP*DRICWM
Trigger: CATCCAGCAGATCCTGTCCCAGGGCCTGGGCTCCAG...GGGGTGGGAGGCACAGGGGCAAAGCAATACCCCAGGGAAAGTGGGAGGTGGTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000270357.10
ENST00000437406.1
CDS-3UTR CCA 90 bp GGCAGGTGCTGGCATCCGGGGCTAGGCACAGCTGTCAGTGTTGAGACAGGAGGCCTGGAGCCCAGGCCCTaGGACAGGATCTGCTGGATG +
Preference number: 4 (lower is better)
Translates to: GRCWHPGLGTAVSVETGGLEPRP*DRICWM
Trigger: CATCCAGCAGATCCTGTCCCAGGGCCTGGGCTCCAG...GCCTCCTGTCTCAACACTGACAGCTGTGCCTAGCCCCGGATGCCAGCACCTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270357.10
ENST00000437406.1
CDS-3UTR CCA 90 bp CACAGAAGGCACAATTGTGGTGTCTGGGAGGTCGAGGGTCAGCCCGCCAACAGGAGGCGGGCTCTGTGCTaGAGCCCAGGCCCTGGGACA +
Preference number: 4 (lower is better)
Translates to: HRRHNCGVWEVEGQPANRRRALC*SPGPGT
Trigger: TGTCCCAGGGCCTGGGCTCCAGCACAGAGCCCGCCT...CCTGTTGGCGGGCTGACCCTCGACCTCCCAGACACCACAATTGTGCCTTCTGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270357.10
ENST00000437406.1
CDS-3UTR CCA 90 bp GGCAGGTGCTGGCATCCGGGGCTAGGCACAGCTGTCAGTGTTGAGACAGGAGGCCAAGAGAGCTGGGAGTaGGGAGGCCAGGTCCACAGG +
Preference number: 4 (lower is better)
Translates to: GRCWHPGLGTAVSVETGGQESWE*GGQVHR
Trigger: CCTGTGGACCTGGCCTCCCCACTCCCAGCTCTCTTG...GCCTCCTGTCTCAACACTGACAGCTGTGCCTAGCCCCGGATGCCAGCACCTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270357.10
ENST00000437406.1
CDS-3UTR CCA 90 bp CACAGAAGGCACAATTGTGGTGTCTGGGAGGTCGAGGGTCAGCCCGCCAACAGGACAGCAGTCCCAGGCTaGAGGCCCCAGGCTCTGGCC +
Preference number: 4 (lower is better)
Translates to: HRRHNCGVWEVEGQPANRTAVPG*RPQALA
Trigger: GGCCAGAGCCTGGGGCCTCCAGCCTGGGACTGCTGT...CCTGTTGGCGGGCTGACCCTCGACCTCCCAGACACCACAATTGTGCCTTCTGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270357.10
ENST00000437406.1
CDS-3UTR CCA 90 bp GTGTTGAGACAGGAGGCATGGTGTGTGCGGGCTGGCCCCAGGGCCTGCAGTGCACATGACTTGGGGGAGTaGGGTGTCCACTCCCAGGCA +
Preference number: 4 (lower is better)
Translates to: VLRQEAWCVRAGPRACSAHDLGE*GVHSQA
Trigger: TGCCTGGGAGTGGACACCCCACTCCCCCAAGTCATG...TGCACTGCAGGCCCTGGGGCCAGCCCGCACACACCATGCCTCCTGTCTCAACAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000270357.10
3UTR CAA 72 bp CGCAGTCATGGCAGGCCTGGCCCACAGAAGGCACAATaGTGGTGTCTGGGAGGTCGAGGGTCAGCCCGCCAA +
Preference number: 4 (lower is better)
Translates to: RSHGRPGPQKAQ*WCLGGRGSARQ
Trigger: TTGGCGGGCTGACCCTCGACCTCCCAGACACCACAATTGTGCCTTCTGTGGGCCAGGCCTGCCATGACTGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270357.10
ENST00000437406.1
CDS-3UTR TCA 90 bp ACAGAGCCAAGACAGATTGTGGTGAGGGTGCCATCCTGGATCCAGATGCCCTCCGCCGCCGGCACTAGGTaGAATCCATGGGCGGCGGCC +
Preference number: 4 (lower is better)
Translates to: TEPRQIVVRVPSWIQMPSAAGTR*NPWAAA
Trigger: GGCCGCCGCCCATGGATTTCACCTAGTGCCGGCGGC...GGAGGGCATCTGGATCCAGGATGGCACCCTCACCACAATCTGTCTTGGCTCTGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270357.10
CDS-3UTR TCA 90 bp ATGACGCTGGGCACTGCTGCTGAGTTTCCCAAAGCCAGGTGTCAGGCACAGGTGCCCCCGATGGCGCCTTaGCGACGGCAGAGTAGGTGC +
Preference number: 4 (lower is better)
Translates to: MTLGTAAEFPKARCQAQVPPMAP*RRQSRC
Trigger: GCACCTACTCTGCCGTCGTCAAGGCGCCATCGGGGG...CACCTGTGCCTGACACCTGGCTTTGGGAAACTCAGCAGCAGTGCCCAGCGTCAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000270357.10
CDS-3UTR TCA 90 bp TCCCTGCAAGGAGGCGTGCTGCAGGGACAGCACAGCCTGGGCCCCCGGCAGACAGATGGTGTACATGCGTaGCATCTGGCTCTCCAGGAA +
Preference number: 4 (lower is better)
Translates to: SLQGGVLQGQHSLGPRQTDGVHA*HLALQE
Trigger: TTCCTGGAGAGCCAGATGTCACGCATGTACACCATC...TGTCTGCCGGGGGCCCAGGCTGTGCTGTCCCTGCAGCACGCCTCCTTGCAGGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000270357.10
ENST00000437406.1
CDS-3UTR TCA 90 bp CAGGAGGCATGGTGTGTGCGGGCTGGCCCCAGGGCCTGCAGTGCAAGAGAGCTGCACAGCTGTCAGTGTTaGGACAGGAGGCATGGTGTG +
Preference number: 4 (lower is better)
Translates to: QEAWCVRAGPRACSARELHSCQC*DRRHGV
Trigger: CACACCATGCCTCCTGTCTCAACACTGACAGCTGTG...CAGCTCTCTTGCACTGCAGGCCCTGGGGCCAGCCCGCACACACCATGCCTCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270357.10
ENST00000437406.1
CDS-3UTR TCA 90 bp ACATTAAGGCACAGTGTGGCGGTCACCATAGGGCTGCTGGGGCCCTTGCCCCGGTGGGACTCCCTGTTCTaGGGGGCTAAGGTTGCCTGG +
Preference number: 4 (lower is better)
Translates to: TLRHSVAVTIGLLGPLPRWDSLF*GAKVAW
Trigger: CCAGGCAACCTTAGCCCCTCAGAACAGGGAGTCCCA...CCGGGGCAAGGGCCCCAGCAGCCCTATGGTGACCGCCACACTGTGCCTTAATGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000270357.10
ENST00000437406.1
CDS-3UTR TCA 90 bp CAGGAGGCATGGTGTGTGCGGGCTGGCCCCAGGGCCTGCAGTGCAAGAGAGCTGATGGGACCATCACCGTaGTACCCCATCACAGCAGTC +
Preference number: 4 (lower is better)
Translates to: QEAWCVRAGPRACSARELMGPSP*YPITAV
Trigger: GACTGCTGTGATGGGGTATCACGGTGATGGTCCCAT...CAGCTCTCTTGCACTGCAGGCCCTGGGGCCAGCCCGCACACACCATGCCTCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000270357.10
ENST00000437406.1
CDS-3UTR TCA 90 bp GCATGTTGGCCAGGTGTGCGTGGCACTGAGATGGTGGCGCCACATCCTTGGGGAAGGTGTGCGTGGCACTaGGATGGTGGCGCCACATCC +
Preference number: 4 (lower is better)
Translates to: ACWPGVRGTEMVAPHPWGRCAWH*DGGATS
Trigger: GGATGTGGCGCCACCATCTCAGTGCCACGCACACCT...TCCCCAAGGATGTGGCGCCACCATCTCAGTGCCACGCACACCTGGCCAACATGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270357.10
CDS-3UTR GCA 90 bp GTGACTGGGGACTGGACAGTGATGGTATCAGGGTTATTTGCCCAGCACCTCCTGCGGAGGCGGAAGAGCTaGGCGCTGGAGGCCGAGGCC +
Preference number: 4 (lower is better)
Translates to: VTGDWTVMVSGLFAQHLLRRRKS*ALEAEA
Trigger: GGCCTCGGCCTCCAGCGCGCAGCTCTTCCGCCTCCG...CAGGAGGTGCTGGGCAAATAACCCTGATACCATCACTGTCCAGTCCCCAGTCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270357.10
CDS-3UTR GCA 90 bp ATGACGCTGGGCACTGCTGCTGAGTTTCCCAAAGCCAGGTGTCAGGCACAGGTGAGCTCCAGGCCCAGCTaGAGGTGGCGGAGGCGGAAG +
Preference number: 4 (lower is better)
Translates to: MTLGTAAEFPKARCQAQVSSRPS*RWRRRK
Trigger: CTTCCGCCTCCGCCACCTGCAGCTGGGCCTGGAGCT...CACCTGTGCCTGACACCTGGCTTTGGGAAACTCAGCAGCAGTGCCCAGCGTCAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270357.10
CDS-3UTR GCA 90 bp CACAGAAGGCACAATTGTGGTGTCTGGGAGGTCGAGGGTCAGCCCGCCAACAGGGCTGCACTCAGCCACTaGTCCACTGCGCCCGACAGC +
Preference number: 4 (lower is better)
Translates to: HRRHNCGVWEVEGQPANRAALSH*STAPDS
Trigger: GCTGTCGGGCGCAGTGGAGCAGTGGCTGAGTGCAGC...CCTGTTGGCGGGCTGACCCTCGACCTCCCAGACACCACAATTGTGCCTTCTGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270357.10
CDS-3UTR GCA 90 bp AGACGTGCTGCTTCTGGGCCACGGCATGTTGGCCAGGTGTGCGTGGCACTGAGACCCAGAAGCTTCATCTaGCGGTGCAGGGCGTCCAGG +
Preference number: 4 (lower is better)
Translates to: RRAASGPRHVGQVCVALRPRSFI*RCRASR
Trigger: CCTGGACGCCCTGCACCGGCAGATGAAGCTTCTGGG...TCTCAGTGCCACGCACACCTGGCCAACATGCCGTGGCCCAGAAGCAGCACGTCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270357.10
CDS-3UTR GCA 90 bp GAGTTTCCCAAAGCCAGGTGTCAGGCACAGGTGCGCAGCTCAGCAGCGTCCGGACTCGAATTCCAGCCCTaGCCGGCAGTCCACGCTCTG +
Preference number: 4 (lower is better)
Translates to: EFPKARCQAQVRSSAASGLEFQP*PAVHAL
Trigger: CAGAGCGTGGACTGCCGGGCAGGGCTGGAATTCGAG...TCCGGACGCTGCTGAGCTGCGCACCTGTGCCTGACACCTGGCTTTGGGAAACTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270357.10
CDS-3UTR GCA 90 bp TGGGCACTGCTGCTGAGTTTCCCAAAGCCAGGTGTCAGGCACAGGTGCGCAGCTGCTGGCCGAGGCAGCTaGCTGGTCCAGAGGTTCTGC +
Preference number: 4 (lower is better)
Translates to: WALLLSFPKPGVRHRCAAAGRGS*LVQRFC
Trigger: GCAGAACCTCTGGACCAGGCAGCTGCCTCGGCCAGC...AGCTGCGCACCTGTGCCTGACACCTGGCTTTGGGAAACTCAGCAGCAGTGCCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270357.10
CDS-3UTR GCA 90 bp ATTAAGGCACAGTGTGGCGGTCACCATAGGGCTGCTGGGGCCCTTGCCCCGGGGCCGGTCCAGGAAGAGTaGTGTCTGGAAGGTCCTCCA +
Preference number: 4 (lower is better)
Translates to: IKAQCGGHHRAAGALAPGPVQEE*CLEGPP
Trigger: TGGAGGACCTTCCAGACAGCACTCTTCCTGGACCGG...CCCCGGGGCAAGGGCCCCAGCAGCCCTATGGTGACCGCCACACTGTGCCTTAAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000270357.10
ENST00000437406.1
CDS-3UTR GCA 90 bp GTGTTGAGACAGGAGGCATGGTGTGTGCGGGCTGGCCCCAGGGCCTGCAGTGCATCTGCAGCCAGCGGATaGGGATCTCAGCGTTCATCG +
Preference number: 4 (lower is better)
Translates to: VLRQEAWCVRAGPRACSASAASG*GSQRSS
Trigger: CGATGAACGCTGAGATCCGCATCCGCTGGCTGCAGA...TGCACTGCAGGCCCTGGGGCCAGCCCGCACACACCATGCCTCCTGTCTCAACAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270357.10
ENST00000437406.1
CDS-3UTR GCA 90 bp GGGCACAGAGCCAAGACAGATTGTGGTGAGGGTGCCATCCTGGATCCAGATGCCCCTTGCCCAGCTCCGTaGTGGGCTCTGAGGCGGGCT +
Preference number: 4 (lower is better)
Translates to: GHRAKTDCGEGAILDPDAPCPAP*WALRRA
Trigger: AGCCCGCCTCAGAGCCCAGCACGGAGCTGGGCAAGG...GGCATCTGGATCCAGGATGGCACCCTCACCACAATCTGTCTTGGCTCTGTGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270357.10
CDS-3UTR GCA 90 bp ACATTAAGGCACAGTGTGGCGGTCACCATAGGGCTGCTGGGGCCCTTGCCCCGGAAGCAGCAGGGCCTGTaGGTCCGAGTCTGTGTCTGC +
Preference number: 4 (lower is better)
Translates to: TLRHSVAVTIGLLGPLPRKQQGL*VRVCVC
Trigger: GCAGACACAGACTCGGACGCACAGGCCCTGCTGCTT...CCGGGGCAAGGGCCCCAGCAGCCCTATGGTGACCGCCACACTGTGCCTTAATGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000270357.10
ENST00000437406.1
CDS-3UTR GCA 90 bp CACAGAAGGCACAATTGTGGTGTCTGGGAGGTCGAGGGTCAGCCCGCCAACAGGCCCTGCAAGGAGGCGTaGTGCAGGGACAGCACAGCC +
Preference number: 4 (lower is better)
Translates to: HRRHNCGVWEVEGQPANRPCKEA*CRDSTA
Trigger: GGCTGTGCTGTCCCTGCAGCACGCCTCCTTGCAGGG...CCTGTTGGCGGGCTGACCCTCGACCTCCCAGACACCACAATTGTGCCTTCTGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270357.10
ENST00000437406.1
CDS-3UTR CCA 90 bp CAGGAGGCATGGTGTGTGCGGGCTGGCCCCAGGGCCTGCAGTGCAAGAGAGCTGACGGGGTGCTCCATGTaGAAGTGGAAGACGCCTTCT +
Preference number: 4 (lower is better)
Translates to: QEAWCVRAGPRACSARELTGCSM*KWKTPS
Trigger: AGAAGGCGTCTTCCACTTCCACATGGAGCACCCCGT...CAGCTCTCTTGCACTGCAGGCCCTGGGGCCAGCCCGCACACACCATGCCTCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270357.10
CDS-3UTR CCA 90 bp ACAGAGCCAAGACAGATTGTGGTGAGGGTGCCATCCTGGATCCAGATGCCCTCCCGCCCGACAGCTTGCTaGTGGCCGTGGGCAGGAGGC +
Preference number: 4 (lower is better)
Translates to: TEPRQIVVRVPSWIQMPSRPTAC*WPWAGG
Trigger: GCCTCCTGCCCACGGCCACCAGCAAGCTGTCGGGCG...GGAGGGCATCTGGATCCAGGATGGCACCCTCACCACAATCTGTCTTGGCTCTGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270357.10
CDS-3UTR CCA 90 bp ACATTAAGGCACAGTGTGGCGGTCACCATAGGGCTGCTGGGGCCCTTGCCCCGGAGATGTCAATGGCGCTaGCCGAGGCAGCTGCCTGGT +
Preference number: 4 (lower is better)
Translates to: TLRHSVAVTIGLLGPLPRRCQWR*PRQLPG
Trigger: ACCAGGCAGCTGCCTCGGCCAGCGCCATTGACATCT...CCGGGGCAAGGGCCCCAGCAGCCCTATGGTGACCGCCACACTGTGCCTTAATGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000270357.10
ENST00000437406.1
CDS-3UTR CCA 90 bp TCCCTGCAAGGAGGCGTGCTGCAGGGACAGCACAGCCTGGGCCCCCGGCAGACAAGGAAGAGTGCTGTCTaGAAGGTCCTCCACTTGGAG +
Preference number: 4 (lower is better)
Translates to: SLQGGVLQGQHSLGPRQTRKSAV*KVLHLE
Trigger: CTCCAAGTGGAGGACCTTCCAGACAGCACTCTTCCT...TGTCTGCCGGGGGCCCAGGCTGTGCTGTCCCTGCAGCACGCCTCCTTGCAGGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000270357.10
ENST00000437406.1
CDS-3UTR CCA 90 bp AGGCATGGTGTGTGCGGGCTGGCCCCAGGGCCTGCAGTGCAAGAGAGCTGGGAGGGGAGGAGTAGCACTTaGACAGGCTCATCACCACCT +
Preference number: 4 (lower is better)
Translates to: RHGVCGLAPGPAVQESWEGRSST*TGSSPP
Trigger: AGGTGGTGATGAGCCTGTCCAAGTGCTACTCCTCCC...CTCCCAGCTCTCTTGCACTGCAGGCCCTGGGGCCAGCCCGCACACACCATGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000270357.10
ENST00000437406.1
CDS-3UTR CCA 90 bp AGGCATGGTGTGTGCGGGCTGGCCCCAGGGCCTGCAGTGCAAGAGAGCTGGGAGCAGAAGGCACAATTGTaGTGTCTGGGAGGTCGAGGG +
Preference number: 4 (lower is better)
Translates to: RHGVCGLAPGPAVQESWEQKAQL*CLGGRG
Trigger: CCCTCGACCTCCCAGACACCACAATTGTGCCTTCTG...CTCCCAGCTCTCTTGCACTGCAGGCCCTGGGGCCAGCCCGCACACACCATGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270357.10
ENST00000437406.1
CDS-3UTR CCA 90 bp GCATGTTGGCCAGGTGTGCGTGGCACTGAGATGGTGGCGCCACATCCTTGGGGACCTGGGCAGAGCTCATaGCCAGAGCCGAGACGCAGT +
Preference number: 4 (lower is better)
Translates to: ACWPGVRGTEMVAPHPWGPGQSS*PEPRRS
Trigger: ACTGCGTCTCGGCTCTGGCCATGAGCTCTGCCCAGG...TCCCCAAGGATGTGGCGCCACCATCTCAGTGCCACGCACACCTGGCCAACATGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270357.10
CDS-3UTR CCA 90 bp AGGGGCAGTGGCAGTCTTCTAGTTCCTAGGTCTCTGGATGGGGTGGCGCCTCCCGCCTGGCCAGCGGGTTaGGAGAAGAGACGTGCTGCT +
Preference number: 4 (lower is better)
Translates to: RGSGSLLVPRSLDGVAPPAWPAG*EKRRAA
Trigger: AGCAGCACGTCTCTTCTCCCAACCCGCTGGCCAGGC...GGGAGGCGCCACCCCATCCAGAGACCTAGGAACTAGAAGACTGCCACTGCCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270357.10
CDS-3UTR CCA 90 bp CAGGAGGCATGGTGTGTGCGGGCTGGCCCCAGGGCCTGCAGTGCAAGAGAGCTGAGTTGCCACCGCCACTaGAGGGGACTCATATGTCCT +
Preference number: 4 (lower is better)
Translates to: QEAWCVRAGPRACSARELSCHRH*RGLICP
Trigger: AGGACATATGAGTCCCCTCCAGTGGCGGTGGCAACT...CAGCTCTCTTGCACTGCAGGCCCTGGGGCCAGCCCGCACACACCATGCCTCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270357.10
CDS-3UTR CCA 90 bp GGCAGGTGCTGGCATCCGGGGCTAGGCACAGCTGTCAGTGTTGAGACAGGAGGCGTGAGGGTGCCATCCTaGATCCAGATGCCCTCCTGC +
Preference number: 4 (lower is better)
Translates to: GRCWHPGLGTAVSVETGGVRVPS*IQMPSC
Trigger: GCAGGAGGGCATCTGGATCCAGGATGGCACCCTCAC...GCCTCCTGTCTCAACACTGACAGCTGTGCCTAGCCCCGGATGCCAGCACCTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270357.10
CDS-3UTR TCA 90 bp CCCAGGATGAAAGTCTGTGACTGCTGGGACTTGAAAACAACCTTGGCGGGGAAGGCGACGGAAGGCGGCTaGGTGCAGGCGCAGAGCCGG +
Preference number: 4 (lower is better)
Translates to: PRMKVCDCWDLKTTLAGKATEGG*VQAQSR
Trigger: CCGGCTCTGCGCCTGCACTCAGCCGCCTTCCGTCGC...CTTCCCCGCCAAGGTTGTTTTCAAGTCCCAGCAGTCACAGACTTTCATCCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270357.10
CDS-3UTR GCA 90 bp GGCAGGTGCTGGCATCCGGGGCTAGGCACAGCTGTCAGTGTTGAGACAGGAGGCTTGCGGACCACAATCTaGAGCCAGCGGATGCGGATC +
Preference number: 4 (lower is better)
Translates to: GRCWHPGLGTAVSVETGGLRTTI*SQRMRI
Trigger: GATCCGCATCCGCTGGCTGCAGATTGTGGTCCGCAA...GCCTCCTGTCTCAACACTGACAGCTGTGCCTAGCCCCGGATGCCAGCACCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270357.10
ENST00000437406.1
CDS-3UTR GCA 90 bp CAGAGCCGAGACGCAGTCATGGCAGGCCTGGCCCACAGAAGGCACAATTGTGGTCCCTGGGACAGGATCTaGTGGATGGCTCTGCGCAGG +
Preference number: 4 (lower is better)
Translates to: QSRDAVMAGLAHRRHNCGPWDRI*WMALRR
Trigger: CCTGCGCAGAGCCATCCAGCAGATCCTGTCCCAGGG...ACCACAATTGTGCCTTCTGTGGGCCAGGCCTGCCATGACTGCGTCTCGGCTCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270357.10
ENST00000437406.1
CDS-3UTR GCA 90 bp CACAGAAGGCACAATTGTGGTGTCTGGGAGGTCGAGGGTCAGCCCGCCAACAGGGGTGGCTCAGATCCCTaGAAGGAGGCGTGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: HRRHNCGVWEVEGQPANRGGSDP*KEACCR
Trigger: CCTGCAGCACGCCTCCTTGCAGGGATCTGAGCCACC...CCTGTTGGCGGGCTGACCCTCGACCTCCCAGACACCACAATTGTGCCTTCTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270357.10
ENST00000437406.1
CDS-3UTR GCA 90 bp GGTGTGAGGGGCAGTGGCAGTCTTCTAGTTCCTAGGTCTCTGGATGGGGTGGCGGCAGGGGCTGCCAGGTaGCCTCCATACCCGCTTTCA +
Preference number: 4 (lower is better)
Translates to: GVRGSGSLLVPRSLDGVAAGAAR*PPYPLS
Trigger: TGAAAGCGGGTATGGAGGGCACCTGGCAGCCCCTGC...CGCCACCCCATCCAGAGACCTAGGAACTAGAAGACTGCCACTGCCCCTCACACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000270357.10
CDS-3UTR GCA 90 bp ACATTAAGGCACAGTGTGGCGGTCACCATAGGGCTGCTGGGGCCCTTGCCCCGGGACTTTAGATGGCCATaGAGCAGGGGCTGCCAGGTG +
Preference number: 4 (lower is better)
Translates to: TLRHSVAVTIGLLGPLPRDFRWP*SRGCQV
Trigger: CACCTGGCAGCCCCTGCTGCATGGCCATCTAAAGTC...CCGGGGCAAGGGCCCCAGCAGCCCTATGGTGACCGCCACACTGTGCCTTAATGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000270357.10
CDS-3UTR CCA 90 bp GAGTTTCCCAAAGCCAGGTGTCAGGCACAGGTGCGCAGCTCAGCAGCGTCCGGAGCCATAGGTCAGCTCTaGGTCCAGCCACCAGATGGC +
Preference number: 4 (lower is better)
Translates to: EFPKARCQAQVRSSAASGAIGQL*VQPPDG
Trigger: GCCATCTGGTGGCTGGACCCAGAGCTGACCTATGGC...TCCGGACGCTGCTGAGCTGCGCACCTGTGCCTGACACCTGGCTTTGGGAAACTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270357.10
CDS-3UTR CCA 90 bp CCTGTCACCTTGTACCCATCTTGGGAAAGGATCACCACTGAGGCCGGGATTTGGCCCACACGCGGCTCCTaGGCCCGATGTCTGCCGGCT +
Preference number: 4 (lower is better)
Translates to: PVTLYPSWERITTEAGIWPTRGS*ARCLPA
Trigger: AGCCGGCAGACATCGGGCCCAGGAGCCGCGTGTGGG...CCAAATCCCGGCCTCAGTGGTGATCCTTTCCCAAGATGGGTACAAGGTGACAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270357.10
CDS-3UTR CCA 90 bp ATTAAGGCACAGTGTGGCGGTCACCATAGGGCTGCTGGGGCCCTTGCCCCGGGGGGTTCATCAGGTGGCTaGGATTCACTCCTGGCTCCA +
Preference number: 4 (lower is better)
Translates to: IKAQCGGHHRAAGALAPGGSSGG*DSLLAP
Trigger: TGGAGCCAGGAGTGAATCCCAGCCACCTGATGAACC...CCCCGGGGCAAGGGCCCCAGCAGCCCTATGGTGACCGCCACACTGTGCCTTAAT
62% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000270357.10
CDS-3UTR CCA 90 bp AGGTGCCCTCCATACCCGCTTTCACAGGGGTTACTGCAGTCATCCTATCCCTGGCGGGCCGGGTCAGGCTaGATCCCTGAGACAGGTCCG +
Preference number: 4 (lower is better)
Translates to: RCPPYPLSQGLLQSSYPWRAGSG*IPETGP
Trigger: CGGACCTGTCTCAGGGATCCAGCCTGACCCGGCCCG...CCAGGGATAGGATGACTGCAGTAACCCCTGTGAAAGCGGGTATGGAGGGCACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270357.10
CDS-3UTR CCA 90 bp ACATTAAGGCACAGTGTGGCGGTCACCATAGGGCTGCTGGGGCCCTTGCCCCGGCACAATTGTGGTGTCTaGGAGGTCGAGGGTCAGCCC +
Preference number: 4 (lower is better)
Translates to: TLRHSVAVTIGLLGPLPRHNCGV*EVEGQP
Trigger: GGGCTGACCCTCGACCTCCCAGACACCACAATTGTG...CCGGGGCAAGGGCCCCAGCAGCCCTATGGTGACCGCCACACTGTGCCTTAATGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000270357.10
ENST00000437406.1
CDS-3UTR CCA 90 bp CACAGAAGGCACAATTGTGGTGTCTGGGAGGTCGAGGGTCAGCCCGCCAACAGGGCCGAGACGCAGTCATaGCAGGCCTGGCCCACAGAA +
Preference number: 4 (lower is better)
Translates to: HRRHNCGVWEVEGQPANRAETQS*QAWPTE
Trigger: TTCTGTGGGCCAGGCCTGCCATGACTGCGTCTCGGC...CCTGTTGGCGGGCTGACCCTCGACCTCCCAGACACCACAATTGTGCCTTCTGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270357.10
ENST00000437406.1
CDS-3UTR CCA 90 bp CAGAGCCGAGACGCAGTCATGGCAGGCCTGGCCCACAGAAGGCACAATTGTGGTCAAGAGAGCTGGGAGTaGGGAGGCCAGGTCCACAGG +
Preference number: 4 (lower is better)
Translates to: QSRDAVMAGLAHRRHNCGQESWE*GGQVHR
Trigger: CCTGTGGACCTGGCCTCCCCACTCCCAGCTCTCTTG...ACCACAATTGTGCCTTCTGTGGGCCAGGCCTGCCATGACTGCGTCTCGGCTCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270357.10
ENST00000437406.1
CDS-3UTR CCA 90 bp CACAGAAGGCACAATTGTGGTGTCTGGGAGGTCGAGGGTCAGCCCGCCAACAGGTTGAGACAGGAGGCATaGTGTGTGCGGGCTGGCCCC +
Preference number: 4 (lower is better)
Translates to: HRRHNCGVWEVEGQPANRLRQEA*CVRAGP
Trigger: GGGGCCAGCCCGCACACACCATGCCTCCTGTCTCAA...CCTGTTGGCGGGCTGACCCTCGACCTCCCAGACACCACAATTGTGCCTTCTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270357.10
ENST00000437406.1
CDS-3UTR CCA 90 bp GTGTTGAGACAGGAGGCATGGTGTGTGCGGGCTGGCCCCAGGGCCTGCAGTGCAACCTCCCACTTTCCCTaGGGTATTGCTTTGCCCCTG +
Preference number: 4 (lower is better)
Translates to: VLRQEAWCVRAGPRACSATSHFP*GIALPL
Trigger: CAGGGGCAAAGCAATACCCCAGGGAAAGTGGGAGGT...TGCACTGCAGGCCCTGGGGCCAGCCCGCACACACCATGCCTCCTGTCTCAACAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000270357.10
ENST00000437406.1
CDS-3UTR CCA 90 bp AGGTGCCCTCCATACCCGCTTTCACAGGGGTTACTGCAGTCATCCTATCCCTGGACAGCAGTCCCAGGCTaGAGGCCCCAGGCTCTGGCC +
Preference number: 4 (lower is better)
Translates to: RCPPYPLSQGLLQSSYPWTAVPG*RPQALA
Trigger: GGCCAGAGCCTGGGGCCTCCAGCCTGGGACTGCTGT...CCAGGGATAGGATGACTGCAGTAACCCCTGTGAAAGCGGGTATGGAGGGCACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270357.10
CDS-3UTR CCA 90 bp TGGGCACTGCTGCTGAGTTTCCCAAAGCCAGGTGTCAGGCACAGGTGCGCAGCTTGGGCCACGGCATGTTaGCCAGGTGTGCGTGGCACT +
Preference number: 4 (lower is better)
Translates to: WALLLSFPKPGVRHRCAAWATAC*PGVRGT
Trigger: AGTGCCACGCACACCTGGCCAACATGCCGTGGCCCA...AGCTGCGCACCTGTGCCTGACACCTGGCTTTGGGAAACTCAGCAGCAGTGCCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270357.10
CDS-3UTR CCA 90 bp AGGCATGGTGTGTGCGGGCTGGCCCCAGGGCCTGCAGTGCAAGAGAGCTGGGAGGGCTGGAGCATAACGTaGCCTAATAGAGAAGCTGGC +
Preference number: 4 (lower is better)
Translates to: RHGVCGLAPGPAVQESWEGWSIT*PNREAG
Trigger: GCCAGCTTCTCTATTAGGCCACGTTATGCTCCAGCC...CTCCCAGCTCTCTTGCACTGCAGGCCCTGGGGCCAGCCCGCACACACCATGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270357.10
CDS-3UTR TCA 90 bp GGGCACAGAGCCAAGACAGATTGTGGTGAGGGTGCCATCCTGGATCCAGATGCCAGGTGTACCGCAGGATaGCCTGGAAGGGCTGGTGCG +
Preference number: 4 (lower is better)
Translates to: GHRAKTDCGEGAILDPDARCTAG*PGRAGA
Trigger: CGCACCAGCCCTTCCAGGTCATCCTGCGGTACACCT...GGCATCTGGATCCAGGATGGCACCCTCACCACAATCTGTCTTGGCTCTGTGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270357.10
CDS-3UTR TCA 90 bp ACCCATCTTGGGAAAGGATCACCACTGAGGCCGGGATTTGGCTTAAGCCACAGGCGGAGTGGCCCTGGGTaGAGACGAAGGGCTTGGCGC +
Preference number: 4 (lower is better)
Translates to: THLGKGSPLRPGFGLSHRRSGPG*RRRAWR
Trigger: GCGCCAAGCCCTTCGTCTTCACCCAGGGCCACTCCG...CCTGTGGCTTAAGCCAAATCCCGGCCTCAGTGGTGATCCTTTCCCAAGATGGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270357.10
CDS-3UTR TCA 90 bp ATGACGCTGGGCACTGCTGCTGAGTTTCCCAAAGCCAGGTGTCAGGCACAGGTGCGTAGGTCTCGGTGGTaGTACGGCGCTGGGCATAGG +
Preference number: 4 (lower is better)
Translates to: MTLGTAAEFPKARCQAQVRRSRW*YGAGHR
Trigger: CCTATGCCCAGCGCCGTATCACCACCGAGACCTACG...CACCTGTGCCTGACACCTGGCTTTGGGAAACTCAGCAGCAGTGCCCAGCGTCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270357.10
CDS-3UTR TCA 90 bp ACATTAAGGCACAGTGTGGCGGTCACCATAGGGCTGCTGGGGCCCTTGCCCCGGGAGACAAGTCTGGACTaGACCTGTCATGGCCTGAGG +
Preference number: 4 (lower is better)
Translates to: TLRHSVAVTIGLLGPLPRETSLD*TCHGLR
Trigger: CCTCAGGCCATGACAGGTTCAGTCCAGACTTGTCTC...CCGGGGCAAGGGCCCCAGCAGCCCTATGGTGACCGCCACACTGTGCCTTAATGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270357.10
CDS-3UTR TCA 90 bp GCATGTTGGCCAGGTGTGCGTGGCACTGAGATGGTGGCGCCACATCCTTGGGGAGCTGCCCTGGGCAGGTaGTTCTCAGTTGTGCCTTAC +
Preference number: 4 (lower is better)
Translates to: ACWPGVRGTEMVAPHPWGAALGR*FSVVPY
Trigger: GTAAGGCACAACTGAGAATCACCTGCCCAGGGCAGC...TCCCCAAGGATGTGGCGCCACCATCTCAGTGCCACGCACACCTGGCCAACATGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270357.10
CDS-3UTR GCA 90 bp AGGGGCAGTGGCAGTCTTCTAGTTCCTAGGTCTCTGGATGGGGTGGCGCCTCCCTTGCGGACCACAATCTaGAGCCAGCGGATGCGGATC +
Preference number: 4 (lower is better)
Translates to: RGSGSLLVPRSLDGVAPPLRTTI*SQRMRI
Trigger: GATCCGCATCCGCTGGCTGCAGATTGTGGTCCGCAA...GGGAGGCGCCACCCCATCCAGAGACCTAGGAACTAGAAGACTGCCACTGCCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270357.10
CDS-3UTR GCA 90 bp GCACCACCTCCCACTTTCCCTGGGGTATTGCTTTGCCCCTGTGCCTCCCACCCCGCGGGATGGTGTACATaGGTGACATCTGGCTCTCCA +
Preference number: 4 (lower is better)
Translates to: APPPTFPGVLLCPCASHPAGWCT*VTSGSP
Trigger: TGGAGAGCCAGATGTCACGCATGTACACCATCCCGC...GGGGTGGGAGGCACAGGGGCAAAGCAATACCCCAGGGAAAGTGGGAGGTGGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000270357.10
ENST00000437406.1
CDS-3UTR GCA 90 bp AAGTTTAATGGGACCATCACCGTGATACCCCATCACAGCAGTCCCAGGCTGGAGGCGGCACCTGGCAGGTaGTGGCATCCGGGGCTAGGC +
Preference number: 4 (lower is better)
Translates to: KFNGTITVIPHHSSPRLEAAPGR*WHPGLG
Trigger: GCCTAGCCCCGGATGCCAGCACCTGCCAGGTGCCGC...CTCCAGCCTGGGACTGCTGTGATGGGGTATCACGGTGATGGTCCCATTAAACTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000270357.10
ENST00000437406.1
CDS-3UTR GCA 90 bp ACAGAGCCAAGACAGATTGTGGTGAGGGTGCCATCCTGGATCCAGATGCCCTCCCCCTGCAAGGAGGCGTaGTGCAGGGACAGCACAGCC +
Preference number: 4 (lower is better)
Translates to: TEPRQIVVRVPSWIQMPSPCKEA*CRDSTA
Trigger: GGCTGTGCTGTCCCTGCAGCACGCCTCCTTGCAGGG...GGAGGGCATCTGGATCCAGGATGGCACCCTCACCACAATCTGTCTTGGCTCTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000270357.10
CDS-3UTR GCA 90 bp AGGGGCAGTGGCAGTCTTCTAGTTCCTAGGTCTCTGGATGGGGTGGCGCCTCCCGTGTCCTTGTTCCTCTaGCAGGGGCCAACTGAGGCT +
Preference number: 4 (lower is better)
Translates to: RGSGSLLVPRSLDGVAPPVSLFL*QGPTEA
Trigger: AGCCTCAGTTGGCCCCTGGCAGAGGAACAAGGACAC...GGGAGGCGCCACCCCATCCAGAGACCTAGGAACTAGAAGACTGCCACTGCCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000270357.10
CDS-3UTR GCA 90 bp GGCAGGTGCTGGCATCCGGGGCTAGGCACAGCTGTCAGTGTTGAGACAGGAGGCTGCATATGGTGGGGTTaGAGCCCCTGTGGTTGTAGG +
Preference number: 4 (lower is better)
Translates to: GRCWHPGLGTAVSVETGGCIWWG*SPCGCR
Trigger: CCTACAACCACAGGGGCTGCAACCCCACCATATGCA...GCCTCCTGTCTCAACACTGACAGCTGTGCCTAGCCCCGGATGCCAGCACCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000270357.10
CDS-3UTR CCA 90 bp ATGACGCTGGGCACTGCTGCTGAGTTTCCCAAAGCCAGGTGTCAGGCACAGGTGTACCGCAGGATGACCTaGAAGGGCTGGTGCGCCTGC +
Preference number: 4 (lower is better)
Translates to: MTLGTAAEFPKARCQAQVYRRMT*KGWCAC
Trigger: GCAGGCGCACCAGCCCTTCCAGGTCATCCTGCGGTA...CACCTGTGCCTGACACCTGGCTTTGGGAAACTCAGCAGCAGTGCCCAGCGTCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270357.10
CDS-3UTR CCA 90 bp ATGACGCTGGGCACTGCTGCTGAGTTTCCCAAAGCCAGGTGTCAGGCACAGGTGGGCAGGGGTTCTCCATaGCCACGATGGGGAAGGAGG +
Preference number: 4 (lower is better)
Translates to: MTLGTAAEFPKARCQAQVGRGSP*PRWGRR
Trigger: CCTCCTTCCCCATCGTGGCCATGGAGAACCCCTGCC...CACCTGTGCCTGACACCTGGCTTTGGGAAACTCAGCAGCAGTGCCCAGCGTCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270357.10
CDS-3UTR CCA 90 bp GGGCACAGAGCCAAGACAGATTGTGGTGAGGGTGCCATCCTGGATCCAGATGCCTCTGCGGTCCACAGCTaGAAAAGGGCCTCCACGGGC +
Preference number: 4 (lower is better)
Translates to: GHRAKTDCGEGAILDPDASAVHS*KRASTG
Trigger: GCCCGTGGAGGCCCTTTTCCAGCTGTGGACCGCAGA...GGCATCTGGATCCAGGATGGCACCCTCACCACAATCTGTCTTGGCTCTGTGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270357.10
CDS-3UTR CCA 90 bp GGCAGGTGCTGGCATCCGGGGCTAGGCACAGCTGTCAGTGTTGAGACAGGAGGCGGAAGGTCCTCCACTTaGAGATGTCAATGGCGCTGG +
Preference number: 4 (lower is better)
Translates to: GRCWHPGLGTAVSVETGGGRSST*RCQWRW
Trigger: CCAGCGCCATTGACATCTCCAAGTGGAGGACCTTCC...GCCTCCTGTCTCAACACTGACAGCTGTGCCTAGCCCCGGATGCCAGCACCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270357.10
ENST00000437406.1
CDS-3UTR CCA 90 bp GAGTTTCCCAAAGCCAGGTGTCAGGCACAGGTGCGCAGCTCAGCAGCGTCCGGATACATGCGTGACATCTaGCTCTCCAGGAAGCGCCGC +
Preference number: 4 (lower is better)
Translates to: EFPKARCQAQVRSSAASGYMRDI*LSRKRR
Trigger: GCGGCGCTTCCTGGAGAGCCAGATGTCACGCATGTA...TCCGGACGCTGCTGAGCTGCGCACCTGTGCCTGACACCTGGCTTTGGGAAACTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270357.10
CDS-3UTR CCA 90 bp GTGTTGAGACAGGAGGCATGGTGTGTGCGGGCTGGCCCCAGGGCCTGCAGTGCACCTCGTACAGCGGGATaGTGTACATGCGTGACATCT +
Preference number: 4 (lower is better)
Translates to: VLRQEAWCVRAGPRACSAPRTAG*CTCVTS
Trigger: AGATGTCACGCATGTACACCATCCCGCTGTACGAGG...TGCACTGCAGGCCCTGGGGCCAGCCCGCACACACCATGCCTCCTGTCTCAACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270357.10
ENST00000437406.1
CDS-3UTR CCA 90 bp ACCCATCTTGGGAAAGGATCACCACTGAGGCCGGGATTTGGCTTAAGCCACAGGAGGCGGGCTCTGTGCTaGAGCCCAGGCCCTGGGACA +
Preference number: 4 (lower is better)
Translates to: THLGKGSPLRPGFGLSHRRRALC*SPGPGT
Trigger: TGTCCCAGGGCCTGGGCTCCAGCACAGAGCCCGCCT...CCTGTGGCTTAAGCCAAATCCCGGCCTCAGTGGTGATCCTTTCCCAAGATGGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270357.10
CDS-3UTR CCA 90 bp ATGACGCTGGGCACTGCTGCTGAGTTTCCCAAAGCCAGGTGTCAGGCACAGGTGTTGAGACAGGAGGCATaGTGTGTGCGGGCTGGCCCC +
Preference number: 4 (lower is better)
Translates to: MTLGTAAEFPKARCQAQVLRQEA*CVRAGP
Trigger: GGGGCCAGCCCGCACACACCATGCCTCCTGTCTCAA...CACCTGTGCCTGACACCTGGCTTTGGGAAACTCAGCAGCAGTGCCCAGCGTCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270357.10
CDS-3UTR CCA 90 bp GGGCACAGAGCCAAGACAGATTGTGGTGAGGGTGCCATCCTGGATCCAGATGCCGCTGTGCGGGGAGGGTaGCTCAGATCCCTGCAAGGA +
Preference number: 4 (lower is better)
Translates to: GHRAKTDCGEGAILDPDAAVRGG*LRSLQG
Trigger: TCCTTGCAGGGATCTGAGCCACCCTCCCCGCACAGC...GGCATCTGGATCCAGGATGGCACCCTCACCACAATCTGTCTTGGCTCTGTGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270357.10
CDS-3UTR CCA 90 bp CACAGAAGGCACAATTGTGGTGTCTGGGAGGTCGAGGGTCAGCCCGCCAACAGGGTGGCACTGAGATGGTaGCGCCACATCCTTGGGGAC +
Preference number: 4 (lower is better)
Translates to: HRRHNCGVWEVEGQPANRVALRW*RHILGD
Trigger: GTCCCCAAGGATGTGGCGCCACCATCTCAGTGCCAC...CCTGTTGGCGGGCTGACCCTCGACCTCCCAGACACCACAATTGTGCCTTCTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270357.10
CDS-3UTR CCA 90 bp ACAGAGCCAAGACAGATTGTGGTGAGGGTGCCATCCTGGATCCAGATGCCCTCCGGCTGTGACTGGGCCTaGCCAGCGGGTTGGGAGAAG +
Preference number: 4 (lower is better)
Translates to: TEPRQIVVRVPSWIQMPSGCDWA*PAGWEK
Trigger: CTTCTCCCAACCCGCTGGCCAGGCCCAGTCACAGCC...GGAGGGCATCTGGATCCAGGATGGCACCCTCACCACAATCTGTCTTGGCTCTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270357.10
CDS-3UTR CCA 90 bp ATTAAGGCACAGTGTGGCGGTCACCATAGGGCTGCTGGGGCCCTTGCCCCGGGGTCTGGGAGACAAGTCTaGACTGAACCTGTCATGGCC +
Preference number: 4 (lower is better)
Translates to: IKAQCGGHHRAAGALAPGSGRQV*TEPVMA
Trigger: GGCCATGACAGGTTCAGTCCAGACTTGTCTCCCAGA...CCCCGGGGCAAGGGCCCCAGCAGCCCTATGGTGACCGCCACACTGTGCCTTAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000270357.10
CDS-3UTR TCA 90 bp CAGGAGGCATGGTGTGTGCGGGCTGGCCCCAGGGCCTGCAGTGCAAGAGAGCTGGGTGTAAGTTTGGGTTaGGTGGCCTGTTTTCCTTCA +
Preference number: 4 (lower is better)
Translates to: QEAWCVRAGPRACSARELGVSLG*VACFPS
Trigger: TGAAGGAAAACAGGCCACTCAACCCAAACTTACACC...CAGCTCTCTTGCACTGCAGGCCCTGGGGCCAGCCCGCACACACCATGCCTCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270357.10
CDS-3UTR GCA 90 bp ATTAAGGCACAGTGTGGCGGTCACCATAGGGCTGCTGGGGCCCTTGCCCCGGGGTTCTTCCTCCATGTATaGACTCCGGGTGGCACTCAT +
Preference number: 4 (lower is better)
Translates to: IKAQCGGHHRAAGALAPGFFLHV*TPGGTH
Trigger: ATGAGTGCCACCCGGAGTGCATACATGGAGGAAGAA...CCCCGGGGCAAGGGCCCCAGCAGCCCTATGGTGACCGCCACACTGTGCCTTAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000270357.10
CDS-3UTR GCA 90 bp GGGCACAGAGCCAAGACAGATTGTGGTGAGGGTGCCATCCTGGATCCAGATGCCGGCTCCAGCTTGACCTaGAGTTTGCTGACCGGGCTG +
Preference number: 4 (lower is better)
Translates to: GHRAKTDCGEGAILDPDAGSSLT*SLLTGL
Trigger: CAGCCCGGTCAGCAAACTGCAGGTCAAGCTGGAGCC...GGCATCTGGATCCAGGATGGCACCCTCACCACAATCTGTCTTGGCTCTGTGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270357.10
CDS-3UTR GCA 90 bp GTGAAGGTGACACATGGCTTTCCTGTGACATCCAGAGGCTACTCAGGCCCAGGGCCCTGGGACAGGATCTaGTGGATGGCTCTGCGCAGG +
Preference number: 4 (lower is better)
Translates to: VKVTHGFPVTSRGYSGPGPWDRI*WMALRR
Trigger: CCTGCGCAGAGCCATCCAGCAGATCCTGTCCCAGGG...CCCTGGGCCTGAGTAGCCTCTGGATGTCACAGGAAAGCCATGTGTCACCTTCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270357.10
CDS-3UTR GCA 90 bp CACAGAAGGCACAATTGTGGTGTCTGGGAGGTCGAGGGTCAGCCCGCCAACAGGGTCCGAGTCTGTGTCTaGTTCAGCCTTGCCCAGCTC +
Preference number: 4 (lower is better)
Translates to: HRRHNCGVWEVEGQPANRVRVCV*FSLAQL
Trigger: GAGCTGGGCAAGGCTGAAGCAGACACAGACTCGGAC...CCTGTTGGCGGGCTGACCCTCGACCTCCCAGACACCACAATTGTGCCTTCTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270357.10
ENST00000437406.1
CDS-3UTR GCA 90 bp CACAGAAGGCACAATTGTGGTGTCTGGGAGGTCGAGGGTCAGCCCGCCAACAGGATTGCTTTGCCCCTGTaGCTCCCACCCCAGGAAGCT +
Preference number: 4 (lower is better)
Translates to: HRRHNCGVWEVEGQPANRIALPL*LPPQEA
Trigger: AGCTTCCTGGGGTGGGAGGCACAGGGGCAAAGCAAT...CCTGTTGGCGGGCTGACCCTCGACCTCCCAGACACCACAATTGTGCCTTCTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000270357.10
ENST00000437406.1
CDS-3UTR GCA 90 bp CAGAGCCGAGACGCAGTCATGGCAGGCCTGGCCCACAGAAGGCACAATTGTGGTATTGCTTTGCCCCTGTaGCTCCCACCCCAGGAAGCT +
Preference number: 4 (lower is better)
Translates to: QSRDAVMAGLAHRRHNCGIALPL*LPPQEA
Trigger: AGCTTCCTGGGGTGGGAGGCACAGGGGCAAAGCAAT...ACCACAATTGTGCCTTCTGTGGGCCAGGCCTGCCATGACTGCGTCTCGGCTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000270357.10
ENST00000437406.1
CDS-3UTR GCA 90 bp CACAGAAGGCACAATTGTGGTGTCTGGGAGGTCGAGGGTCAGCCCGCCAACAGGTTGGGAGAAGAGACGTaGTGCTTCTGGGCCACGGCA +
Preference number: 4 (lower is better)
Translates to: HRRHNCGVWEVEGQPANRLGEET*CFWATA
Trigger: TGCCGTGGCCCAGAAGCAGCACGTCTCTTCTCCCAA...CCTGTTGGCGGGCTGACCCTCGACCTCCCAGACACCACAATTGTGCCTTCTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270357.10
CDS-3UTR GCA 90 bp AGGCATGGTGTGTGCGGGCTGGCCCCAGGGCCTGCAGTGCAAGAGAGCTGGGAGATAAAACGTGCGACCTaGCAGGATTTGGAATGTGGG +
Preference number: 4 (lower is better)
Translates to: RHGVCGLAPGPAVQESWEIKRAT*QDLECG
Trigger: CCCACATTCCAAATCCTGGCAGGTCGCACGTTTTAT...CTCCCAGCTCTCTTGCACTGCAGGCCCTGGGGCCAGCCCGCACACACCATGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270357.10
CDS-3UTR GCA 90 bp GGCAGGTGCTGGCATCCGGGGCTAGGCACAGCTGTCAGTGTTGAGACAGGAGGCCCGCTAGGAGAGGGGTaGTGTGCTAATAAAACGTGC +
Preference number: 4 (lower is better)
Translates to: GRCWHPGLGTAVSVETGGPLGEG*CANKTC
Trigger: GCACGTTTTATTAGCACAGCACCCCTCTCCTAGCGG...GCCTCCTGTCTCAACACTGACAGCTGTGCCTAGCCCCGGATGCCAGCACCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000270357.10
CDS-3UTR CCA 90 bp AGACGTGCTGCTTCTGGGCCACGGCATGTTGGCCAGGTGTGCGTGGCACTGAGATGTATGCACTCCGGGTaGCACTCATCAGCACCTGCA +
Preference number: 4 (lower is better)
Translates to: RRAASGPRHVGQVCVALRCMHSG*HSSAPA
Trigger: TGCAGGTGCTGATGAGTGCCACCCGGAGTGCATACA...TCTCAGTGCCACGCACACCTGGCCAACATGCCGTGGCCCAGAAGCAGCACGTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270357.10
CDS-3UTR CCA 90 bp GCATGTTGGCCAGGTGTGCGTGGCACTGAGATGGTGGCGCCACATCCTTGGGGAGGAAGGTCCTCCACTTaGAGATGTCAATGGCGCTGG +
Preference number: 4 (lower is better)
Translates to: ACWPGVRGTEMVAPHPWGGRSST*RCQWRW
Trigger: CCAGCGCCATTGACATCTCCAAGTGGAGGACCTTCC...TCCCCAAGGATGTGGCGCCACCATCTCAGTGCCACGCACACCTGGCCAACATGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270357.10
CDS-3UTR CCA 90 bp CAGAGCCGAGACGCAGTCATGGCAGGCCTGGCCCACAGAAGGCACAATTGTGGTTACATGCGTGACATCTaGCTCTCCAGGAAGCGCCGC +
Preference number: 4 (lower is better)
Translates to: QSRDAVMAGLAHRRHNCGYMRDI*LSRKRR
Trigger: GCGGCGCTTCCTGGAGAGCCAGATGTCACGCATGTA...ACCACAATTGTGCCTTCTGTGGGCCAGGCCTGCCATGACTGCGTCTCGGCTCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270357.10
ENST00000437406.1
CDS-3UTR CCA 90 bp CAGAGCCGAGACGCAGTCATGGCAGGCCTGGCCCACAGAAGGCACAATTGTGGTACAGGATCTGCTGGATaGCTCTGCGCAGGTTGGGGT +
Preference number: 4 (lower is better)
Translates to: QSRDAVMAGLAHRRHNCGTGSAG*LCAGWG
Trigger: ACCCCAACCTGCGCAGAGCCATCCAGCAGATCCTGT...ACCACAATTGTGCCTTCTGTGGGCCAGGCCTGCCATGACTGCGTCTCGGCTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270357.10
ENST00000437406.1
CDS-3UTR CCA 90 bp CAGAGCCGAGACGCAGTCATGGCAGGCCTGGCCCACAGAAGGCACAATTGTGGTTGGGACAGGATCTGCTaGATGGCTCTGCGCAGGTTG +
Preference number: 4 (lower is better)
Translates to: QSRDAVMAGLAHRRHNCGWDRIC*MALRRL
Trigger: CAACCTGCGCAGAGCCATCCAGCAGATCCTGTCCCA...ACCACAATTGTGCCTTCTGTGGGCCAGGCCTGCCATGACTGCGTCTCGGCTCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270357.10
ENST00000437406.1
CDS-3UTR CCA 90 bp GTGACTGGGGACTGGACAGTGATGGTATCAGGGTTATTTGCCCAGCACCTCCTGGCACCTGGCAGGTGCTaGCATCCGGGGCTAGGCACA +
Preference number: 4 (lower is better)
Translates to: VTGDWTVMVSGLFAQHLLAPGRC*HPGLGT
Trigger: TGTGCCTAGCCCCGGATGCCAGCACCTGCCAGGTGC...CAGGAGGTGCTGGGCAAATAACCCTGATACCATCACTGTCCAGTCCCCAGTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270357.10
CDS-3UTR CCA 90 bp ACAGAGCCAAGACAGATTGTGGTGAGGGTGCCATCCTGGATCCAGATGCCCTCCCTGCCATGTGTGGAGTaGGGCTGTGACTGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: TEPRQIVVRVPSWIQMPSLPCVE*GCDWAW
Trigger: CCAGGCCCAGTCACAGCCCCACTCCACACATGGCAG...GGAGGGCATCTGGATCCAGGATGGCACCCTCACCACAATCTGTCTTGGCTCTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270357.10
CDS-3UTR CCA 90 bp AGACGTGCTGCTTCTGGGCCACGGCATGTTGGCCAGGTGTGCGTGGCACTGAGATGGCAAGACTTTAGATaGCCATGCAGCAGGGGCTGC +
Preference number: 4 (lower is better)
Translates to: RRAASGPRHVGQVCVALRWQDFR*PCSRGC
Trigger: GCAGCCCCTGCTGCATGGCCATCTAAAGTCTTGCCA...TCTCAGTGCCACGCACACCTGGCCAACATGCCGTGGCCCAGAAGCAGCACGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270357.10
CDS-3UTR CCA 90 bp CCCAGGATGAAAGTCTGTGACTGCTGGGACTTGAAAACAACCTTGGCGGGGAAGAGCAGCGTCCGGAGGTaGCGCTGTGGGCGTGGCTGT +
Preference number: 4 (lower is better)
Translates to: PRMKVCDCWDLKTTLAGKSSVRR*RCGRGC
Trigger: ACAGCCACGCCCACAGCGCCACCTCCGGACGCTGCT...CTTCCCCGCCAAGGTTGTTTTCAAGTCCCAGCAGTCACAGACTTTCATCCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270357.10
CDS-3UTR TCA 90 bp GGGCACAGAGCCAAGACAGATTGTGGTGAGGGTGCCATCCTGGATCCAGATGCCCATCCTTGGGGACTGTaGAGGGCAGCGACACCTATC +
Preference number: 4 (lower is better)
Translates to: GHRAKTDCGEGAILDPDAHPWGL*RAATPI
Trigger: GATAGGTGTCGCTGCCCTTCACAGTCCCCAAGGATG...GGCATCTGGATCCAGGATGGCACCCTCACCACAATCTGTCTTGGCTCTGTGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270357.10
CDS-3UTR TCA 90 bp GTGAAGGTGACACATGGCTTTCCTGTGACATCCAGAGGCTACTCAGGCCCAGGGTCCTATCCCTGGGTGTaGGGGGCAGTGGCAGTCTTC +
Preference number: 4 (lower is better)
Translates to: VKVTHGFPVTSRGYSGPGSYPWV*GAVAVF
Trigger: GAAGACTGCCACTGCCCCTCACACCCAGGGATAGGA...CCCTGGGCCTGAGTAGCCTCTGGATGTCACAGGAAAGCCATGTGTCACCTTCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000270357.10
CDS-3UTR TCA 90 bp ATTAAGGCACAGTGTGGCGGTCACCATAGGGCTGCTGGGGCCCTTGCCCCGGGGCAGGATGAAAGTCTGTaGCTGCTGGGACTTGAAAAC +
Preference number: 4 (lower is better)
Translates to: IKAQCGGHHRAAGALAPGQDESL*LLGLEN
Trigger: GTTTTCAAGTCCCAGCAGTCACAGACTTTCATCCTG...CCCCGGGGCAAGGGCCCCAGCAGCCCTATGGTGACCGCCACACTGTGCCTTAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000270357.10
CDS-3UTR TCA 90 bp AGGTGCCCTCCATACCCGCTTTCACAGGGGTTACTGCAGTCATCCTATCCCTGGGAAACAACACTGGCCTaGGTATCGGCCGGAGGCTGC +
Preference number: 4 (lower is better)
Translates to: RCPPYPLSQGLLQSSYPWETTLA*VSAGGC
Trigger: GCAGCCTCCGGCCGATACTCAGGCCAGTGTTGTTTC...CCAGGGATAGGATGACTGCAGTAACCCCTGTGAAAGCGGGTATGGAGGGCACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270357.10
CDS-3UTR TCA 90 bp TGGGCACTGCTGCTGAGTTTCCCAAAGCCAGGTGTCAGGCACAGGTGCGCAGCTCATCTCCTACCTGCCTaGCTAGGCCCTAATCCCCAA +
Preference number: 4 (lower is better)
Translates to: WALLLSFPKPGVRHRCAAHLLPA*LGPNPQ
Trigger: TTGGGGATTAGGGCCTAGTCAGGCAGGTAGGAGATG...AGCTGCGCACCTGTGCCTGACACCTGGCTTTGGGAAACTCAGCAGCAGTGCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270357.10
CDS-3UTR GCA 90 bp CCTGTCACCTTGTACCCATCTTGGGAAAGGATCACCACTGAGGCCGGGATTTGGCAGCCACTGCTCCACTaGGCCCGACAGCTTGCTGGT +
Preference number: 4 (lower is better)
Translates to: PVTLYPSWERITTEAGIWQPLLH*ARQLAG
Trigger: ACCAGCAAGCTGTCGGGCGCAGTGGAGCAGTGGCTG...CCAAATCCCGGCCTCAGTGGTGATCCTTTCCCAAGATGGGTACAAGGTGACAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270357.10
CDS-3UTR GCA 90 bp GTGACTGGGGACTGGACAGTGATGGTATCAGGGTTATTTGCCCAGCACCTCCTGCGGCAGTCCACGCTCTaGTCCTTCAGCTCCGGGAAG +
Preference number: 4 (lower is better)
Translates to: VTGDWTVMVSGLFAQHLLRQSTL*SFSSGK
Trigger: CTTCCCGGAGCTGAAGGAGCAGAGCGTGGACTGCCG...CAGGAGGTGCTGGGCAAATAACCCTGATACCATCACTGTCCAGTCCCCAGTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270357.10
CDS-3UTR GCA 90 bp CAGAGCCGAGACGCAGTCATGGCAGGCCTGGCCCACAGAAGGCACAATTGTGGTCTGGTCCAGAGGTTCTaGGGTCCACAGCTGGAAAAG +
Preference number: 4 (lower is better)
Translates to: QSRDAVMAGLAHRRHNCGLVQRF*GPQLEK
Trigger: CTTTTCCAGCTGTGGACCGCAGAACCTCTGGACCAG...ACCACAATTGTGCCTTCTGTGGGCCAGGCCTGCCATGACTGCGTCTCGGCTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270357.10
ENST00000437406.1
CDS-3UTR GCA 90 bp GCCTGCAGCATGAGAAAGCTTTGTTGTGTGAGACGTCTGCGCTTCATAGTTGTGGCGGCACCTGGCAGGTaGTGGCATCCGGGGCTAGGC +
Preference number: 4 (lower is better)
Translates to: ACSMRKLCCVRRLRFIVVAAPGR*WHPGLG
Trigger: GCCTAGCCCCGGATGCCAGCACCTGCCAGGTGCCGC...CACAACTATGAAGCGCAGACGTCTCACACAACAAAGCTTTCTCATGCTGCAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270357.10
CDS-3UTR GCA 90 bp AGGGGCAGTGGCAGTCTTCTAGTTCCTAGGTCTCTGGATGGGGTGGCGCCTCCCAGGATTCGGGGAGCCTaGTCTCGGGCTTATGTATCA +
Preference number: 4 (lower is better)
Translates to: RGSGSLLVPRSLDGVAPPRIRGA*SRAYVS
Trigger: TGATACATAAGCCCGAGAGCAGGCTCCCCGAATCCT...GGGAGGCGCCACCCCATCCAGAGACCTAGGAACTAGAAGACTGCCACTGCCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000270357.10
CDS-3UTR GCA 90 bp CACAGAAGGCACAATTGTGGTGTCTGGGAGGTCGAGGGTCAGCCCGCCAACAGGGGTATCAGGGTTATTTaGCCAGCACCTCCTGCCCTC +
Preference number: 4 (lower is better)
Translates to: HRRHNCGVWEVEGQPANRGIRVI*PAPPAL
Trigger: GAGGGCAGGAGGTGCTGGGCAAATAACCCTGATACC...CCTGTTGGCGGGCTGACCCTCGACCTCCCAGACACCACAATTGTGCCTTCTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270357.10
CDS-3UTR GCA 90 bp AGGTGCCCTCCATACCCGCTTTCACAGGGGTTACTGCAGTCATCCTATCCCTGGATCCAGATGCCCTCCTaGCCCCAGGGTCATGACGCT +
Preference number: 4 (lower is better)
Translates to: RCPPYPLSQGLLQSSYPWIQMPS*PQGHDA
Trigger: AGCGTCATGACCCTGGGGGCAGGAGGGCATCTGGAT...CCAGGGATAGGATGACTGCAGTAACCCCTGTGAAAGCGGGTATGGAGGGCACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270357.10
CDS-3UTR CCA 90 bp CAGAGCCGAGACGCAGTCATGGCAGGCCTGGCCCACAGAAGGCACAATTGTGGTGGGAGGAGTAGCACTTaGACAGGCTCATCACCACCT +
Preference number: 4 (lower is better)
Translates to: QSRDAVMAGLAHRRHNCGGRSST*TGSSPP
Trigger: AGGTGGTGATGAGCCTGTCCAAGTGCTACTCCTCCC...ACCACAATTGTGCCTTCTGTGGGCCAGGCCTGCCATGACTGCGTCTCGGCTCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270357.10
ENST00000437406.1
CDS-3UTR CCA 90 bp GAGTTTCCCAAAGCCAGGTGTCAGGCACAGGTGCGCAGCTCAGCAGCGTCCGGACCTCGTACAGCGGGATaGTGTACATGCGTGACATCT +
Preference number: 4 (lower is better)
Translates to: EFPKARCQAQVRSSAASGPRTAG*CTCVTS
Trigger: AGATGTCACGCATGTACACCATCCCGCTGTACGAGG...TCCGGACGCTGCTGAGCTGCGCACCTGTGCCTGACACCTGGCTTTGGGAAACTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270357.10
CDS-3UTR CCA 90 bp GTGACTGGGGACTGGACAGTGATGGTATCAGGGTTATTTGCCCAGCACCTCCTGCCTCTCCCAGCATGGTaGGCCTGGAGAGAGCACCAG +
Preference number: 4 (lower is better)
Translates to: VTGDWTVMVSGLFAQHLLPLPAW*AWREHQ
Trigger: CTGGTGCTCTCTCCAGGCCCACCATGCTGGGAGAGG...CAGGAGGTGCTGGGCAAATAACCCTGATACCATCACTGTCCAGTCCCCAGTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270357.10
CDS-3UTR CCA 90 bp AGACGTGCTGCTTCTGGGCCACGGCATGTTGGCCAGGTGTGCGTGGCACTGAGAACTGAGGCCGGGATTTaGCTTAAGCCACAGGTGAAG +
Preference number: 4 (lower is better)
Translates to: RRAASGPRHVGQVCVALRTEAGI*LKPQVK
Trigger: CTTCACCTGTGGCTTAAGCCAAATCCCGGCCTCAGT...TCTCAGTGCCACGCACACCTGGCCAACATGCCGTGGCCCAGAAGCAGCACGTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270357.10
CDS-3UTR CCA 90 bp GGTTGCAGCCCCTGTGGTTGTAGGCCCCTTAGAACTTCCACTGCCAGTGTGAGCTGTAGGCACGTGGAGTaGAGTCACCCGCAGACCACA +
Preference number: 4 (lower is better)
Translates to: GCSPCGCRPLRTSTASVSCRHVE*SHPQTT
Trigger: TGTGGTCTGCGGGTGACTCCACTCCACGTGCCTACA...GCTCACACTGGCAGTGGAAGTTCTAAGGGGCCTACAACCACAGGGGCTGCAACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270357.10
CDS-3UTR CCA 90 bp GCACCACCTCCCACTTTCCCTGGGGTATTGCTTTGCCCCTGTGCCTCCCACCCCCAGCTCTCTTATCCCTaGCAAGGTGCCTGGAAACAT +
Preference number: 4 (lower is better)
Translates to: APPPTFPGVLLCPCASHPQLSYP*QGAWKH
Trigger: ATGTTTCCAGGCACCTTGCCAGGGATAAGAGAGCTG...GGGGTGGGAGGCACAGGGGCAAAGCAATACCCCAGGGAAAGTGGGAGGTGGTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000270357.10
CDS-3UTR CCA 90 bp AGACGTGCTGCTTCTGGGCCACGGCATGTTGGCCAGGTGTGCGTGGCACTGAGACTTTTGTGCATATGGTaGGGTTGCAGCCCCTGTGGT +
Preference number: 4 (lower is better)
Translates to: RRAASGPRHVGQVCVALRLLCIW*GCSPCG
Trigger: ACCACAGGGGCTGCAACCCCACCATATGCACAAAAG...TCTCAGTGCCACGCACACCTGGCCAACATGCCGTGGCCCAGAAGCAGCACGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270357.10
CDS-3UTR TCA 90 bp GCCTGCAGCATGAGAAAGCTTTGTTGTGTGAGACGTCTGCGCTTCATAGTTGTGCGATGTCTGCCGGCTTaGGGTCTCCGGCCACCAGGG +
Preference number: 4 (lower is better)
Translates to: ACSMRKLCCVRRLRFIVVRCLPA*GLRPPG
Trigger: CCCTGGTGGCCGGAGACCTCAAGCCGGCAGACATCG...CACAACTATGAAGCGCAGACGTCTCACACAACAAAGCTTTCTCATGCTGCAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270357.10
CDS-3UTR TCA 90 bp GGGCACAGAGCCAAGACAGATTGTGGTGAGGGTGCCATCCTGGATCCAGATGCCGGGCCACCACGCTGGTaGACTTGTACTTCTCCACAT +
Preference number: 4 (lower is better)
Translates to: GHRAKTDCGEGAILDPDAGPPRW*TCTSPH
Trigger: ATGTGGAGAAGTACAAGTTCACCAGCGTGGTGGCCC...GGCATCTGGATCCAGGATGGCACCCTCACCACAATCTGTCTTGGCTCTGTGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270357.10
CDS-3UTR TCA 90 bp AAGTTTAATGGGACCATCACCGTGATACCCCATCACAGCAGTCCCAGGCTGGAGGCGGGCCTGTGGCATTaGGCCAGCGCTCGAATTCCA +
Preference number: 4 (lower is better)
Translates to: KFNGTITVIPHHSSPRLEAGLWH*ASARIP
Trigger: TGGAATTCGAGCGCTGGCTCAATGCCACAGGCCCGC...CTCCAGCCTGGGACTGCTGTGATGGGGTATCACGGTGATGGTCCCATTAAACTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270357.10
CDS-3UTR TCA 90 bp GGTGTGAGGGGCAGTGGCAGTCTTCTAGTTCCTAGGTCTCTGGATGGGGTGGCGGAACAGGAAGGAGGGTaGGTGGGACATTTGGTGACT +
Preference number: 4 (lower is better)
Translates to: GVRGSGSLLVPRSLDGVAEQEGG*VGHLVT
Trigger: AGTCACCAAATGTCCCACTCACCCTCCTTCCTGTTC...CGCCACCCCATCCAGAGACCTAGGAACTAGAAGACTGCCACTGCCCCTCACACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270357.10
CDS-3UTR TCA 90 bp ATGACGCTGGGCACTGCTGCTGAGTTTCCCAAAGCCAGGTGTCAGGCACAGGTGCAAGACAGATTGTGGTaGGGGTGCCATCCTGGATCC +
Preference number: 4 (lower is better)
Translates to: MTLGTAAEFPKARCQAQVQDRLW*GCHPGS
Trigger: GGATCCAGGATGGCACCCTCACCACAATCTGTCTTG...CACCTGTGCCTGACACCTGGCTTTGGGAAACTCAGCAGCAGTGCCCAGCGTCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270357.10
CDS-3UTR GCA 90 bp GGTTGCAGCCCCTGTGGTTGTAGGCCCCTTAGAACTTCCACTGCCAGTGTGAGCCTGGTCCAGAGGTTCTaGGGTCCACAGCTGGAAAAG +
Preference number: 4 (lower is better)
Translates to: GCSPCGCRPLRTSTASVSLVQRF*GPQLEK
Trigger: CTTTTCCAGCTGTGGACCGCAGAACCTCTGGACCAG...GCTCACACTGGCAGTGGAAGTTCTAAGGGGCCTACAACCACAGGGGCTGCAACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000270357.10
CDS-3UTR GCA 90 bp GCCCCAGACCCTAGACCAGAGTTGCCACCGCCACTGGAGGGGACTCATATGTCCTTTCACAGGGGTTACTaGAGTCATCCTATCCCTGGG +
Preference number: 4 (lower is better)
Translates to: APDPRPELPPPLEGTHMSFHRGY*SHPIPG
Trigger: CCCAGGGATAGGATGACTGCAGTAACCCCTGTGAAA...GGACATATGAGTCCCCTCCAGTGGCGGTGGCAACTCTGGTCTAGGGTCTGGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000270357.10
CDS-3UTR GCA 90 bp GAGTGGAAGTTTAATGGGACCATCACCGTGATACCCCATCACAGCAGTCCCAGGCATCCTGGATCCAGATaGCCTCCTGCCCCCAGGGTC +
Preference number: 4 (lower is better)
Translates to: EWKFNGTITVIPHHSSPRHPGSR*PPAPRV
Trigger: GACCCTGGGGGCAGGAGGGCATCTGGATCCAGGATG...CCTGGGACTGCTGTGATGGGGTATCACGGTGATGGTCCCATTAAACTTCCACTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000270357.10
CDS-3UTR GCA 90 bp GGTGTGAGGGGCAGTGGCAGTCTTCTAGTTCCTAGGTCTCTGGATGGGGTGGCGAGCCTGAGGTGGGCCTaGAGCATGAGAAAGCTTTGT +
Preference number: 4 (lower is better)
Translates to: GVRGSGSLLVPRSLDGVASLRWA*SMRKLC
Trigger: ACAAAGCTTTCTCATGCTGCAGGCCCACCTCAGGCT...CGCCACCCCATCCAGAGACCTAGGAACTAGAAGACTGCCACTGCCCCTCACACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270357.10
CDS-3UTR GCA 90 bp GCATGTTGGCCAGGTGTGCGTGGCACTGAGATGGTGGCGCCACATCCTTGGGGAGTGCTGTTTGCCATCTaGCCCCGCTTTTGTGCATAT +
Preference number: 4 (lower is better)
Translates to: ACWPGVRGTEMVAPHPWGVLFAI*PRFCAY
Trigger: ATATGCACAAAAGCGGGGGCAGATGGCAAACAGCAC...TCCCCAAGGATGTGGCGCCACCATCTCAGTGCCACGCACACCTGGCCAACATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000270357.10
CDS-3UTR GCA 90 bp ACATTAAGGCACAGTGTGGCGGTCACCATAGGGCTGCTGGGGCCCTTGCCCCGGCAGGGCCTAGAAATTTaGATGGGTCTCCTTCACTGT +
Preference number: 4 (lower is better)
Translates to: TLRHSVAVTIGLLGPLPRQGLEI*MGLLHC
Trigger: ACAGTGAAGGAGACCCATGCAAATTTCTAGGCCCTG...CCGGGGCAAGGGCCCCAGCAGCCCTATGGTGACCGCCACACTGTGCCTTAATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270357.10
CDS-3UTR CCA 90 bp CACAGAAGGCACAATTGTGGTGTCTGGGAGGTCGAGGGTCAGCCCGCCAACAGGAGGAAGAGTGCTGTCTaGAAGGTCCTCCACTTGGAG +
Preference number: 4 (lower is better)
Translates to: HRRHNCGVWEVEGQPANRRKSAV*KVLHLE
Trigger: CTCCAAGTGGAGGACCTTCCAGACAGCACTCTTCCT...CCTGTTGGCGGGCTGACCCTCGACCTCCCAGACACCACAATTGTGCCTTCTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270357.10
ENST00000437406.1
CDS-3UTR CCA 90 bp GAGTGGAAGTTTAATGGGACCATCACCGTGATACCCCATCACAGCAGTCCCAGGGAGAGATGGCACTGCTaGGGGCCTCGTCCCCAAGCA +
Preference number: 4 (lower is better)
Translates to: EWKFNGTITVIPHHSSPRERWHC*GPRPQA
Trigger: TGCTTGGGGACGAGGCCCCCAGCAGTGCCATCTCTC...CCTGGGACTGCTGTGATGGGGTATCACGGTGATGGTCCCATTAAACTTCCACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000270357.10
ENST00000437406.1
CDS-3UTR CCA 90 bp GAGTGGAAGTTTAATGGGACCATCACCGTGATACCCCATCACAGCAGTCCCAGGCCTGGGCAGAGCTCATaGCCAGAGCCGAGACGCAGT +
Preference number: 4 (lower is better)
Translates to: EWKFNGTITVIPHHSSPRPGQSS*PEPRRS
Trigger: ACTGCGTCTCGGCTCTGGCCATGAGCTCTGCCCAGG...CCTGGGACTGCTGTGATGGGGTATCACGGTGATGGTCCCATTAAACTTCCACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270357.10
ENST00000437406.1
CDS-3UTR CCA 90 bp AAGTTTAATGGGACCATCACCGTGATACCCCATCACAGCAGTCCCAGGCTGGAGGCTGTGCGGGGAGGGTaGCTCAGATCCCTGCAAGGA +
Preference number: 4 (lower is better)
Translates to: KFNGTITVIPHHSSPRLEAVRGG*LRSLQG
Trigger: TCCTTGCAGGGATCTGAGCCACCCTCCCCGCACAGC...CTCCAGCCTGGGACTGCTGTGATGGGGTATCACGGTGATGGTCCCATTAAACTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000270357.10
ENST00000437406.1
CDS-3UTR CCA 90 bp GAGTGGAAGTTTAATGGGACCATCACCGTGATACCCCATCACAGCAGTCCCAGGCCAGCATGGTGGGCCTaGAGAGAGCACCAGCACCAC +
Preference number: 4 (lower is better)
Translates to: EWKFNGTITVIPHHSSPRPAWWA*REHQHH
Trigger: GTGGTGCTGGTGCTCTCTCCAGGCCCACCATGCTGG...CCTGGGACTGCTGTGATGGGGTATCACGGTGATGGTCCCATTAAACTTCCACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270357.10
ENST00000437406.1
CDS-3UTR CCA 90 bp CCTGTCACCTTGTACCCATCTTGGGAAAGGATCACCACTGAGGCCGGGATTTGGTGCGTGGCACTGAGATaGTGGCGCCACATCCTTGGG +
Preference number: 4 (lower is better)
Translates to: PVTLYPSWERITTEAGIWCVALR*WRHILG
Trigger: CCCAAGGATGTGGCGCCACCATCTCAGTGCCACGCA...CCAAATCCCGGCCTCAGTGGTGATCCTTTCCCAAGATGGGTACAAGGTGACAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270357.10
CDS-3UTR CCA 90 bp TGGGCACTGCTGCTGAGTTTCCCAAAGCCAGGTGTCAGGCACAGGTGCGCAGCTACAGAGAACATGACTTaGGGGAGTGGGGTGTCCACT +
Preference number: 4 (lower is better)
Translates to: WALLLSFPKPGVRHRCAATENMT*GSGVST
Trigger: AGTGGACACCCCACTCCCCCAAGTCATGTTCTCTGT...AGCTGCGCACCTGTGCCTGACACCTGGCTTTGGGAAACTCAGCAGCAGTGCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270357.10
CDS-3UTR CCA 90 bp GCATGTTGGCCAGGTGTGCGTGGCACTGAGATGGTGGCGCCACATCCTTGGGGATCTGCACTTGCAAGCTaGGTGGAAGAGGAACAAAGG +
Preference number: 4 (lower is better)
Translates to: ACWPGVRGTEMVAPHPWGSALAS*VEEEQR
Trigger: CCTTTGTTCCTCTTCCACCCAGCTTGCAAGTGCAGA...TCCCCAAGGATGTGGCGCCACCATCTCAGTGCCACGCACACCTGGCCAACATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270357.10
CDS-3UTR CCA 90 bp CCTGTCACCTTGTACCCATCTTGGGAAAGGATCACCACTGAGGCCGGGATTTGGGGCCGGAGGCTGCATTaGACAAGGGACTGCAGGGAA +
Preference number: 4 (lower is better)
Translates to: PVTLYPSWERITTEAGIWGRRLH*TRDCRE
Trigger: TTCCCTGCAGTCCCTTGTCCAATGCAGCCTCCGGCC...CCAAATCCCGGCCTCAGTGGTGATCCTTTCCCAAGATGGGTACAAGGTGACAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270357.10
CDS-3UTR CCA 90 bp CAGAGCCGAGACGCAGTCATGGCAGGCCTGGCCCACAGAAGGCACAATTGTGGTCGCTTCATAGTTGTGTaGCTGGAGCATAACGTGGCC +
Preference number: 4 (lower is better)
Translates to: QSRDAVMAGLAHRRHNCGRFIVV*LEHNVA
Trigger: GGCCACGTTATGCTCCAGCCACACAACTATGAAGCG...ACCACAATTGTGCCTTCTGTGGGCCAGGCCTGCCATGACTGCGTCTCGGCTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270357.10
3UTR CAA 72 bp ACACATGTAGAGACGGCCCCAGACCCTAGACCAGAGTaGCCACCGCCACTGGAGGGGACTCATATGTCCTTG +
Preference number: 4 (lower is better)
Translates to: THVETAPDPRPE*PPPLEGTHMSL
Trigger: CAAGGACATATGAGTCCCCTCCAGTGGCGGTGGCAACTCTGGTCTAGGGTCTGGGGCCGTCTCTACATGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270357.10
CDS-3UTR TCA 90 bp GGGCACAGAGCCAAGACAGATTGTGGTGAGGGTGCCATCCTGGATCCAGATGCCGATGGTGTACATGCGTaGCATCTGGCTCTCCAGGAA +
Preference number: 4 (lower is better)
Translates to: GHRAKTDCGEGAILDPDADGVHA*HLALQE
Trigger: TTCCTGGAGAGCCAGATGTCACGCATGTACACCATC...GGCATCTGGATCCAGGATGGCACCCTCACCACAATCTGTCTTGGCTCTGTGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270357.10
CDS-3UTR TCA 90 bp CACAGAAGGCACAATTGTGGTGTCTGGGAGGTCGAGGGTCAGCCCGCCAACAGGCTGGGGACTGGACAGTaGTGGTATCAGGGTTATTTG +
Preference number: 4 (lower is better)
Translates to: HRRHNCGVWEVEGQPANRLGTGQ*WYQGYL
Trigger: CAAATAACCCTGATACCATCACTGTCCAGTCCCCAG...CCTGTTGGCGGGCTGACCCTCGACCTCCCAGACACCACAATTGTGCCTTCTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270357.10
CDS-3UTR TCA 90 bp ACCCATCTTGGGAAAGGATCACCACTGAGGCCGGGATTTGGCTTAAGCCACAGGTGGCGGGGAAGAGGCTaGGAAAGCAGTTCTGCCACT +
Preference number: 4 (lower is better)
Translates to: THLGKGSPLRPGFGLSHRWRGRG*ESSSAT
Trigger: AGTGGCAGAACTGCTTTCTCAGCCTCTTCCCCGCCA...CCTGTGGCTTAAGCCAAATCCCGGCCTCAGTGGTGATCCTTTCCCAAGATGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270357.10
CDS-3UTR TCA 90 bp ATGACGCTGGGCACTGCTGCTGAGTTTCCCAAAGCCAGGTGTCAGGCACAGGTGAAGAAGAGCCCAGGATaGAAGTCTGTGACTGCTGGG +
Preference number: 4 (lower is better)
Translates to: MTLGTAAEFPKARCQAQVKKSPG*KSVTAG
Trigger: CCCAGCAGTCACAGACTTTCATCCTGGGCTCTTCTT...CACCTGTGCCTGACACCTGGCTTTGGGAAACTCAGCAGCAGTGCCCAGCGTCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270357.10
CDS-3UTR GCA 90 bp GTGACTGGGGACTGGACAGTGATGGTATCAGGGTTATTTGCCCAGCACCTCCTGCCGGTCCAGGAAGAGTaGTGTCTGGAAGGTCCTCCA +
Preference number: 4 (lower is better)
Translates to: VTGDWTVMVSGLFAQHLLPVQEE*CLEGPP
Trigger: TGGAGGACCTTCCAGACAGCACTCTTCCTGGACCGG...CAGGAGGTGCTGGGCAAATAACCCTGATACCATCACTGTCCAGTCCCCAGTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270357.10
CDS-3UTR GCA 90 bp ACAGAGCCAAGACAGATTGTGGTGAGGGTGCCATCCTGGATCCAGATGCCCTCCGCGGGATGGTGTACATaGGTGACATCTGGCTCTCCA +
Preference number: 4 (lower is better)
Translates to: TEPRQIVVRVPSWIQMPSAGWCT*VTSGSP
Trigger: TGGAGAGCCAGATGTCACGCATGTACACCATCCCGC...GGAGGGCATCTGGATCCAGGATGGCACCCTCACCACAATCTGTCTTGGCTCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270357.10
CDS-3UTR GCA 90 bp GGTTGCAGCCCCTGTGGTTGTAGGCCCCTTAGAACTTCCACTGCCAGTGTGAGCACACAGCCAGGAAGATaGAGAGGACAAGAGTCGCGA +
Preference number: 4 (lower is better)
Translates to: GCSPCGCRPLRTSTASVSTQPGR*RGQESR
Trigger: TCGCGACTCTTGTCCTCTGCATCTTCCTGGCTGTGT...GCTCACACTGGCAGTGGAAGTTCTAAGGGGCCTACAACCACAGGGGCTGCAACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270357.10
CDS-3UTR CCA 90 bp GGTTGCAGCCCCTGTGGTTGTAGGCCCCTTAGAACTTCCACTGCCAGTGTGAGCTGCTCCATGTGGAAGTaGAAGACGCCTTCTTCCTCC +
Preference number: 4 (lower is better)
Translates to: GCSPCGCRPLRTSTASVSCSMWK*KTPSSS
Trigger: GGAGGAAGAAGGCGTCTTCCACTTCCACATGGAGCA...GCTCACACTGGCAGTGGAAGTTCTAAGGGGCCTACAACCACAGGGGCTGCAACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270357.10
CDS-3UTR CCA 90 bp ACCCATCTTGGGAAAGGATCACCACTGAGGCCGGGATTTGGCTTAAGCCACAGGCTGTGGGCCACCTCGTaGATGACATCGATGACCAGG +
Preference number: 4 (lower is better)
Translates to: THLGKGSPLRPGFGLSHRLWATS*MTSMTR
Trigger: CCTGGTCATCGATGTCATCCACGAGGTGGCCCACAG...CCTGTGGCTTAAGCCAAATCCCGGCCTCAGTGGTGATCCTTTCCCAAGATGGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270357.10
CDS-3UTR CCA 90 bp AGGTGCCCTCCATACCCGCTTTCACAGGGGTTACTGCAGTCATCCTATCCCTGGTTGCCGAACCAACTGTaGGCCACCTCGTGGATGACA +
Preference number: 4 (lower is better)
Translates to: RCPPYPLSQGLLQSSYPWLPNQL*ATSWMT
Trigger: TGTCATCCACGAGGTGGCCCACAGTTGGTTCGGCAA...CCAGGGATAGGATGACTGCAGTAACCCCTGTGAAAGCGGGTATGGAGGGCACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270357.10
CDS-3UTR CCA 90 bp CCTGTCACCTTGTACCCATCTTGGGAAAGGATCACCACTGAGGCCGGGATTTGGGTCATCAAAGCGCTGTaGGTCTCCGCAGAGCTGGGA +
Preference number: 4 (lower is better)
Translates to: PVTLYPSWERITTEAGIWVIKAL*VSAELG
Trigger: TCCCAGCTCTGCGGAGACCCACAGCGCTTTGATGAC...CCAAATCCCGGCCTCAGTGGTGATCCTTTCCCAAGATGGGTACAAGGTGACAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270357.10
CDS-3UTR CCA 90 bp GAGTGGAAGTTTAATGGGACCATCACCGTGATACCCCATCACAGCAGTCCCAGGTCCCCACACTCTCCCTaGGTCCTGGGACTCCCTGTT +
Preference number: 4 (lower is better)
Translates to: EWKFNGTITVIPHHSSPRSPHSP*VLGLPV
Trigger: AACAGGGAGTCCCAGGACCCAGGGAGAGTGTGGGGA...CCTGGGACTGCTGTGATGGGGTATCACGGTGATGGTCCCATTAAACTTCCACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000270357.10
ENST00000437406.1
CDS-3UTR CCA 90 bp GTGAAGGTGACACATGGCTTTCCTGTGACATCCAGAGGCTACTCAGGCCCAGGGACCTCCCACTTTCCCTaGGGTATTGCTTTGCCCCTG +
Preference number: 4 (lower is better)
Translates to: VKVTHGFPVTSRGYSGPGTSHFP*GIALPL
Trigger: CAGGGGCAAAGCAATACCCCAGGGAAAGTGGGAGGT...CCCTGGGCCTGAGTAGCCTCTGGATGTCACAGGAAAGCCATGTGTCACCTTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270357.10
CDS-3UTR CCA 90 bp AGACGTGCTGCTTCTGGGCCACGGCATGTTGGCCAGGTGTGCGTGGCACTGAGAGCGACACCTATCGCCTaGGAAAATGGAAATCTCAGT +
Preference number: 4 (lower is better)
Translates to: RRAASGPRHVGQVCVALRATPIA*ENGNLS
Trigger: ACTGAGATTTCCATTTTCCCAGGCGATAGGTGTCGC...TCTCAGTGCCACGCACACCTGGCCAACATGCCGTGGCCCAGAAGCAGCACGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270357.10
CDS-3UTR CCA 90 bp GGCAGGTGCTGGCATCCGGGGCTAGGCACAGCTGTCAGTGTTGAGACAGGAGGCGGACACCATCAAGCATaGTTAAGAAACAGGAAAGGG +
Preference number: 4 (lower is better)
Translates to: GRCWHPGLGTAVSVETGGGHHQA*LRNRKG
Trigger: CCCTTTCCTGTTTCTTAACCATGCTTGATGGTGTCC...GCCTCCTGTCTCAACACTGACAGCTGTGCCTAGCCCCGGATGCCAGCACCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270357.10
CDS-3UTR CCA 90 bp CCCAGGATGAAAGTCTGTGACTGCTGGGACTTGAAAACAACCTTGGCGGGGAAGGTGGCTGTAGGCACGTaGAGTGGAGTCACCCGCAGA +
Preference number: 4 (lower is better)
Translates to: PRMKVCDCWDLKTTLAGKVAVGT*SGVTRR
Trigger: TCTGCGGGTGACTCCACTCCACGTGCCTACAGCCAC...CTTCCCCGCCAAGGTTGTTTTCAAGTCCCAGCAGTCACAGACTTTCATCCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270357.10
CDS-3UTR TCA 90 bp GCCTGCAGCATGAGAAAGCTTTGTTGTGTGAGACGTCTGCGCTTCATAGTTGTGCCCACGTGGCGTTGGTaGCAGCGTTGCCGAACCAAC +
Preference number: 4 (lower is better)
Translates to: ACSMRKLCCVRRLRFIVVPTWRW*QRCRTN
Trigger: GTTGGTTCGGCAACGCTGTCACCAACGCCACGTGGG...CACAACTATGAAGCGCAGACGTCTCACACAACAAAGCTTTCTCATGCTGCAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270357.10
CDS-3UTR GCA 90 bp GCCTGCAGCATGAGAAAGCTTTGTTGTGTGAGACGTCTGCGCTTCATAGTTGTGGCACTCATCAGCACCTaGACCCCCGATGGCGCCTTG +
Preference number: 4 (lower is better)
Translates to: ACSMRKLCCVRRLRFIVVALIST*TPDGAL
Trigger: CAAGGCGCCATCGGGGGTGCAGGTGCTGATGAGTGC...CACAACTATGAAGCGCAGACGTCTCACACAACAAAGCTTTCTCATGCTGCAGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000270357.10
CDS-3UTR GCA 90 bp GTGAAGGTGACACATGGCTTTCCTGTGACATCCAGAGGCTACTCAGGCCCAGGGAGACAATGTCGTACCTaGCCCACATGTAGGGCCCAT +
Preference number: 4 (lower is better)
Translates to: VKVTHGFPVTSRGYSGPGRQCRT*PTCRAH
Trigger: ATGGGCCCTACATGTGGGGCAGGTACGACATTGTCT...CCCTGGGCCTGAGTAGCCTCTGGATGTCACAGGAAAGCCATGTGTCACCTTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270357.10
CDS-3UTR GCA 90 bp AAGTTTAATGGGACCATCACCGTGATACCCCATCACAGCAGTCCCAGGCTGGAGGTCCGAGTCTGTGTCTaGTTCAGCCTTGCCCAGCTC +
Preference number: 4 (lower is better)
Translates to: KFNGTITVIPHHSSPRLEVRVCV*FSLAQL
Trigger: GAGCTGGGCAAGGCTGAAGCAGACACAGACTCGGAC...CTCCAGCCTGGGACTGCTGTGATGGGGTATCACGGTGATGGTCCCATTAAACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270357.10
ENST00000437406.1
CDS-3UTR GCA 90 bp AAGTTTAATGGGACCATCACCGTGATACCCCATCACAGCAGTCCCAGGCTGGAGGGAGAAGAGACGTGCTaGTTCTGGGCCACGGCATGT +
Preference number: 4 (lower is better)
Translates to: KFNGTITVIPHHSSPRLEGEETC*FWATAC
Trigger: ACATGCCGTGGCCCAGAAGCAGCACGTCTCTTCTCC...CTCCAGCCTGGGACTGCTGTGATGGGGTATCACGGTGATGGTCCCATTAAACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270357.10
CDS-3UTR GCA 90 bp GCACCACCTCCCACTTTCCCTGGGGTATTGCTTTGCCCCTGTGCCTCCCACCCCATGAAAGTCTGTGACTaGTGGGACTTGAAAACAACC +
Preference number: 4 (lower is better)
Translates to: APPPTFPGVLLCPCASHPMKVCD*WDLKTT
Trigger: GGTTGTTTTCAAGTCCCAGCAGTCACAGACTTTCAT...GGGGTGGGAGGCACAGGGGCAAAGCAATACCCCAGGGAAAGTGGGAGGTGGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000270357.10
CDS-3UTR CCA 90 bp GAGTGGAAGTTTAATGGGACCATCACCGTGATACCCCATCACAGCAGTCCCAGGACTTGGAGATGTCAATaGCGCTGGCCGAGGCAGCTG +
Preference number: 4 (lower is better)
Translates to: EWKFNGTITVIPHHSSPRTWRCQ*RWPRQL
Trigger: CAGCTGCCTCGGCCAGCGCCATTGACATCTCCAAGT...CCTGGGACTGCTGTGATGGGGTATCACGGTGATGGTCCCATTAAACTTCCACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270357.10
ENST00000437406.1
CDS-3UTR CCA 90 bp AGGTGCCCTCCATACCCGCTTTCACAGGGGTTACTGCAGTCATCCTATCCCTGGCTAGCTGTGCCTGCCTaGCAAGACTTTAGATGGCCA +
Preference number: 4 (lower is better)
Translates to: RCPPYPLSQGLLQSSYPWLAVPA*QDFRWP
Trigger: TGGCCATCTAAAGTCTTGCCAGGCAGGCACAGCTAG...CCAGGGATAGGATGACTGCAGTAACCCCTGTGAAAGCGGGTATGGAGGGCACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270357.10
CDS-3UTR TCA 90 bp GAGTGGAAGTTTAATGGGACCATCACCGTGATACCCCATCACAGCAGTCCCAGGAGCCCTTCTCGTAGGTaGACAGGTTCATCAGGTGGC +
Preference number: 4 (lower is better)
Translates to: EWKFNGTITVIPHHSSPRSPSRR*TGSSGG
Trigger: GCCACCTGATGAACCTGTTCACCTACGAGAAGGGCT...CCTGGGACTGCTGTGATGGGGTATCACGGTGATGGTCCCATTAAACTTCCACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270357.10
CDS-3UTR TCA 90 bp GAGTGGAAGTTTAATGGGACCATCACCGTGATACCCCATCACAGCAGTCCCAGGGGGCCACCACGCTGGTaGACTTGTACTTCTCCACAT +
Preference number: 4 (lower is better)
Translates to: EWKFNGTITVIPHHSSPRGPPRW*TCTSPH
Trigger: ATGTGGAGAAGTACAAGTTCACCAGCGTGGTGGCCC...CCTGGGACTGCTGTGATGGGGTATCACGGTGATGGTCCCATTAAACTTCCACTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000270357.10
ENST00000437406.1
CDS-3UTR TCA 90 bp AAGTTTAATGGGACCATCACCGTGATACCCCATCACAGCAGTCCCAGGCTGGAGCACAGCTGTCAGTGTTaGGACAGGAGGCATGGTGTG +
Preference number: 4 (lower is better)
Translates to: KFNGTITVIPHHSSPRLEHSCQC*DRRHGV
Trigger: CACACCATGCCTCCTGTCTCAACACTGACAGCTGTG...CTCCAGCCTGGGACTGCTGTGATGGGGTATCACGGTGATGGTCCCATTAAACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270357.10
ENST00000437406.1
CDS-3UTR TCA 90 bp CACAGAAGGCACAATTGTGGTGTCTGGGAGGTCGAGGGTCAGCCCGCCAACAGGGTGCCTGGAAACATTTaGGATCTCTGTTCATCGGTA +
Preference number: 4 (lower is better)
Translates to: HRRHNCGVWEVEGQPANRVPGNI*DLCSSV
Trigger: TACCGATGAACAGAGATCTCAAATGTTTCCAGGCAC...CCTGTTGGCGGGCTGACCCTCGACCTCCCAGACACCACAATTGTGCCTTCTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270357.10
CDS-3UTR GCA 90 bp GTGACTGGGGACTGGACAGTGATGGTATCAGGGTTATTTGCCCAGCACCTCCTGCAGGATAGTAGTCGTTaGGGACCACAATCTGCAGCC +
Preference number: 4 (lower is better)
Translates to: VTGDWTVMVSGLFAQHLLQDSSR*GPQSAA
Trigger: GGCTGCAGATTGTGGTCCGCAACGACTACTATCCTG...CAGGAGGTGCTGGGCAAATAACCCTGATACCATCACTGTCCAGTCCCCAGTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270357.10
CDS-3UTR GCA 90 bp GCCTGCAGCATGAGAAAGCTTTGTTGTGTGAGACGTCTGCGCTTCATAGTTGTGTCCCCACTTCCTGGCTaGCATGTGTGGAGTGGGGCT +
Preference number: 4 (lower is better)
Translates to: ACSMRKLCCVRRLRFIVVSPLPG*HVWSGA
Trigger: AGCCCCACTCCACACATGGCAGCCAGGAAGTGGGGA...CACAACTATGAAGCGCAGACGTCTCACACAACAAAGCTTTCTCATGCTGCAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270357.10
CDS-3UTR CCA 90 bp GGTTGCAGCCCCTGTGGTTGTAGGCCCCTTAGAACTTCCACTGCCAGTGTGAGCACCTTGTACCCATCTTaGGAAAGGATCACCACTGAG +
Preference number: 4 (lower is better)
Translates to: GCSPCGCRPLRTSTASVSTLYPS*ERITTE
Trigger: CTCAGTGGTGATCCTTTCCCAAGATGGGTACAAGGT...GCTCACACTGGCAGTGGAAGTTCTAAGGGGCCTACAACCACAGGGGCTGCAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270357.10
CDS-3UTR CCA 90 bp CCTGTCACCTTGTACCCATCTTGGGAAAGGATCACCACTGAGGCCGGGATTTGGCGACCTGCCAGGATTTaGAATGTGGGCAGGCTGTTA +
Preference number: 4 (lower is better)
Translates to: PVTLYPSWERITTEAGIWRPARI*NVGRLL
Trigger: TAACAGCCTGCCCACATTCCAAATCCTGGCAGGTCG...CCAAATCCCGGCCTCAGTGGTGATCCTTTCCCAAGATGGGTACAAGGTGACAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270357.10
CDS-3UTR CCA 90 bp GTGAAGGTGACACATGGCTTTCCTGTGACATCCAGAGGCTACTCAGGCCCAGGGATCTCTCTCACATTCTaGCCTCAGCTCCGTCGTTGT +
Preference number: 4 (lower is better)
Translates to: VKVTHGFPVTSRGYSGPGISLTF*PQLRRC
Trigger: ACAACGACGGAGCTGAGGCCAGAATGTGAGAGAGAT...CCCTGGGCCTGAGTAGCCTCTGGATGTCACAGGAAAGCCATGTGTCACCTTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270357.10
3UTR CAA 72 bp TGCCAGCCTGAGGTGGGCCTGCAGCATGAGAAAGCTTaGTTGTGTGAGACGTCTGCGCTTCATAGTTGTGTG +
Preference number: 4 (lower is better)
Translates to: CQPEVGLQHEKA*LCETSALHSCV
Trigger: CACACAACTATGAAGCGCAGACGTCTCACACAACAAAGCTTTCTCATGCTGCAGGCCCACCTCAGGCTGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270357.10
CDS-3UTR TCA 90 bp CCCAGGATGAAAGTCTGTGACTGCTGGGACTTGAAAACAACCTTGGCGGGGAAGCACATGGCTTTCCTGTaGCATCCAGAGGCTACTCAG +
Preference number: 4 (lower is better)
Translates to: PRMKVCDCWDLKTTLAGKHMAFL*HPEATQ
Trigger: CTGAGTAGCCTCTGGATGTCACAGGAAAGCCATGTG...CTTCCCCGCCAAGGTTGTTTTCAAGTCCCAGCAGTCACAGACTTTCATCCTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270357.10
CDS-3UTR TCA 90 bp CAGAGCCGAGACGCAGTCATGGCAGGCCTGGCCCACAGAAGGCACAATTGTGGTTGTGAAGAAGGTACATaGAGCAACACATGTAGAGAC +
Preference number: 4 (lower is better)
Translates to: QSRDAVMAGLAHRRHNCGCEEGT*SNTCRD
Trigger: GTCTCTACATGTGTTGCTTCATGTACCTTCTTCACA...ACCACAATTGTGCCTTCTGTGGGCCAGGCCTGCCATGACTGCGTCTCGGCTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270357.10
CDS-3UTR GCA 90 bp GAGTGGAAGTTTAATGGGACCATCACCGTGATACCCCATCACAGCAGTCCCAGGCAGGATAGTAGTCGTTaGGGACCACAATCTGCAGCC +
Preference number: 4 (lower is better)
Translates to: EWKFNGTITVIPHHSSPRQDSSR*GPQSAA
Trigger: GGCTGCAGATTGTGGTCCGCAACGACTACTATCCTG...CCTGGGACTGCTGTGATGGGGTATCACGGTGATGGTCCCATTAAACTTCCACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270357.10
ENST00000437406.1
CDS-3UTR GCA 90 bp GGTGTGAGGGGCAGTGGCAGTCTTCTAGTTCCTAGGTCTCTGGATGGGGTGGCGCTCCAAAACAAAACATaGCTGTCACCTTGTACCCAT +
Preference number: 4 (lower is better)
Translates to: GVRGSGSLLVPRSLDGVALQNKT*LSPCTH
Trigger: ATGGGTACAAGGTGACAGGCATGTTTTGTTTTGGAG...CGCCACCCCATCCAGAGACCTAGGAACTAGAAGACTGCCACTGCCCCTCACACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000270357.10
CDS-3UTR CCA 90 bp GCCTGCAGCATGAGAAAGCTTTGTTGTGTGAGACGTCTGCGCTTCATAGTTGTGGCTGGGATTCACTCCTaGCTCCAGCTTGACCTGCAG +
Preference number: 4 (lower is better)
Translates to: ACSMRKLCCVRRLRFIVVAGIHS*LQLDLQ
Trigger: CTGCAGGTCAAGCTGGAGCCAGGAGTGAATCCCAGC...CACAACTATGAAGCGCAGACGTCTCACACAACAAAGCTTTCTCATGCTGCAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270357.10
CDS-3UTR CCA 90 bp GCATGTTGGCCAGGTGTGCGTGGCACTGAGATGGTGGCGCCACATCCTTGGGGATATCGCCTGGGAAAATaGAAATCTCAGTTCTCCAAA +
Preference number: 4 (lower is better)
Translates to: ACWPGVRGTEMVAPHPWGYRLGK*KSQFSK
Trigger: TTTGGAGAACTGAGATTTCCATTTTCCCAGGCGATA...TCCCCAAGGATGTGGCGCCACCATCTCAGTGCCACGCACACCTGGCCAACATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270357.10
3UTR CAA 72 bp GAAGAGCCCAGGATGAAAGTCTGTGACTGCTGGGACTaGAAAACAACCTTGGCGGGGAAGAGGCTGAGAAAG +
Preference number: 4 (lower is better)
Translates to: EEPRMKVCDCWD*KTTLAGKRLRK
Trigger: CTTTCTCAGCCTCTTCCCCGCCAAGGTTGTTTTCAAGTCCCAGCAGTCACAGACTTTCATCCTGGGCTCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270357.10
3UTR CAA 72 bp CAGCTCTCTTATCCCTGGCAAGGTGCCTGGAAACATTaGAGATCTCTGTTCATCGGTACGGGTCCGAGAGTG +
Preference number: 4 (lower is better)
Translates to: QLSYPWQGAWKH*RSLFIGTGPRV
Trigger: CACTCTCGGACCCGTACCGATGAACAGAGATCTCAAATGTTTCCAGGCACCTTGCCAGGGATAAGAGAGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270357.10
3UTR CAA 72 bp GTTTGGGTTGAGTGGCCTGTTTTCCTTCACACTGTGTaGCTGCCCTGGGCAGGTGATTCTCAGTTGTGCCTT +
Preference number: 4 (lower is better)
Translates to: VWVEWPVFLHTV*LPWAGDSQLCL
Trigger: AAGGCACAACTGAGAATCACCTGCCCAGGGCAGCAACACAGTGTGAAGGAAAACAGGCCACTCAACCCAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270357.10
CDS-3UTR GCA 90 bp CCTGAGGGACTTAGAAAACCTTATTTGGACCTCCAGGGCCTAGAAATTTGCATGAAGCAGCAGGGCCTGTaGGTCCGAGTCTGTGTCTGC +
Preference number: 4 (lower is better)
Translates to: PEGLRKPYLDLQGLEICMKQQGL*VRVCVC
Trigger: GCAGACACAGACTCGGACGCACAGGCCCTGCTGCTT...CATGCAAATTTCTAGGCCCTGGAGGTCCAAATAAGGTTTTCTAAGTCCCTCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270357.10
CDS-3UTR GCA 90 bp GAGTGGAAGTTTAATGGGACCATCACCGTGATACCCCATCACAGCAGTCCCAGGGTCATTAGTGCTGTTTaGCATCTGCCCCCGCTTTTG +
Preference number: 4 (lower is better)
Translates to: EWKFNGTITVIPHHSSPRVISAV*HLPPLL
Trigger: CAAAAGCGGGGGCAGATGGCAAACAGCACTAATGAC...CCTGGGACTGCTGTGATGGGGTATCACGGTGATGGTCCCATTAAACTTCCACTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000270357.10
CDS-3UTR CCA 90 bp GCCTGCAGCATGAGAAAGCTTTGTTGTGTGAGACGTCTGCGCTTCATAGTTGTGCAGTCATGGCAGGCCTaGCCCACAGAAGGCACAATT +
Preference number: 4 (lower is better)
Translates to: ACSMRKLCCVRRLRFIVVQSWQA*PTEGTI
Trigger: AATTGTGCCTTCTGTGGGCCAGGCCTGCCATGACTG...CACAACTATGAAGCGCAGACGTCTCACACAACAAAGCTTTCTCATGCTGCAGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270357.10
CDS-3UTR TCA 90 bp CAGAGCCGAGACGCAGTCATGGCAGGCCTGGCCCACAGAAGGCACAATTGTGGTAGTCATTTCGAGAGCTaGATTGCAAAAGAAAGAAGA +
Preference number: 4 (lower is better)
Translates to: QSRDAVMAGLAHRRHNCGSHFES*IAKERR
Trigger: TCTTCTTTCTTTTGCAATTCAGCTCTCGAAATGACT...ACCACAATTGTGCCTTCTGTGGGCCAGGCCTGCCATGACTGCGTCTCGGCTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270357.10
CDS-3UTR GCA 90 bp CCTGAGGGACTTAGAAAACCTTATTTGGACCTCCAGGGCCTAGAAATTTGCATGCGACGGCAGAGTAGGTaGACTTCACGGCAGGTGTGT +
Preference number: 4 (lower is better)
Translates to: PEGLRKPYLDLQGLEICMRRQSR*TSRQVC
Trigger: ACACACCTGCCGTGAAGTGCACCTACTCTGCCGTCG...CATGCAAATTTCTAGGCCCTGGAGGTCCAAATAAGGTTTTCTAAGTCCCTCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270357.10
CDS-3UTR GCA 90 bp CCTGAGGGACTTAGAAAACCTTATTTGGACCTCCAGGGCCTAGAAATTTGCATGATACAGCCGCTCAGCTaGACTCAGCCACTGCTCCAC +
Preference number: 4 (lower is better)
Translates to: PEGLRKPYLDLQGLEICMIQPLS*TQPLLH
Trigger: GTGGAGCAGTGGCTGAGTGCAGCTGAGCGGCTGTAT...CATGCAAATTTCTAGGCCCTGGAGGTCCAAATAAGGTTTTCTAAGTCCCTCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270357.10
CDS-3UTR CCA 90 bp CCTGAGGGACTTAGAAAACCTTATTTGGACCTCCAGGGCCTAGAAATTTGCATGACAGGATCTGCTGGATaGCTCTGCGCAGGTTGGGGT +
Preference number: 4 (lower is better)
Translates to: PEGLRKPYLDLQGLEICMTGSAG*LCAGWG
Trigger: ACCCCAACCTGCGCAGAGCCATCCAGCAGATCCTGT...CATGCAAATTTCTAGGCCCTGGAGGTCCAAATAAGGTTTTCTAAGTCCCTCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270357.10
CDS-3UTR CCA 90 bp AAGTTTAATGGGACCATCACCGTGATACCCCATCACAGCAGTCCCAGGCTGGAGAGTGAAGGTGACACATaGCTTTCCTGTGACATCCAG +
Preference number: 4 (lower is better)
Translates to: KFNGTITVIPHHSSPRLESEGDT*LSCDIQ
Trigger: CTGGATGTCACAGGAAAGCCATGTGTCACCTTCACT...CTCCAGCCTGGGACTGCTGTGATGGGGTATCACGGTGATGGTCCCATTAAACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270357.10
CDS-3UTR CCA 90 bp AAGTTTAATGGGACCATCACCGTGATACCCCATCACAGCAGTCCCAGGCTGGAGGGACTGAACCTGTCATaGCCTGAGGGACTTAGAAAA +
Preference number: 4 (lower is better)
Translates to: KFNGTITVIPHHSSPRLEGLNLS*PEGLRK
Trigger: TTTTCTAAGTCCCTCAGGCCATGACAGGTTCAGTCC...CTCCAGCCTGGGACTGCTGTGATGGGGTATCACGGTGATGGTCCCATTAAACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270357.10
3UTR CAA 72 bp ATGAAAGTCTGTGACTGCTGGGACTTGAAAACAACCTaGGCGGGGAAGAGGCTGAGAAAGCAGTTCTGCCAC +
Preference number: 4 (lower is better)
Translates to: MKVCDCWDLKTT*AGKRLRKQFCH
Trigger: GTGGCAGAACTGCTTTCTCAGCCTCTTCCCCGCCAAGGTTGTTTTCAAGTCCCAGCAGTCACAGACTTTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270357.10
CDS-3UTR TCA 90 bp CCTGAGGGACTTAGAAAACCTTATTTGGACCTCCAGGGCCTAGAAATTTGCATGATGGGACCATCACCGTaGTACCCCATCACAGCAGTC +
Preference number: 4 (lower is better)
Translates to: PEGLRKPYLDLQGLEICMMGPSP*YPITAV
Trigger: GACTGCTGTGATGGGGTATCACGGTGATGGTCCCAT...CATGCAAATTTCTAGGCCCTGGAGGTCCAAATAAGGTTTTCTAAGTCCCTCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270357.10
CDS-3UTR CCA 90 bp GCCTGCAGCATGAGAAAGCTTTGTTGTGTGAGACGTCTGCGCTTCATAGTTGTGCACTTGCAAGCTGGGTaGAAGAGGAACAAAGGTCAG +
Preference number: 4 (lower is better)
Translates to: ACSMRKLCCVRRLRFIVVHLQAG*KRNKGQ
Trigger: CTGACCTTTGTTCCTCTTCCACCCAGCTTGCAAGTG...CACAACTATGAAGCGCAGACGTCTCACACAACAAAGCTTTCTCATGCTGCAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270357.10
CDS-3UTR CCA 90 bp CCTGAGGGACTTAGAAAACCTTATTTGGACCTCCAGGGCCTAGAAATTTGCATGGGGACATTTGGTGACTaGGGACTGGACAGTGATGGT +
Preference number: 4 (lower is better)
Translates to: PEGLRKPYLDLQGLEICMGTFGD*GLDSDG
Trigger: ACCATCACTGTCCAGTCCCCAGTCACCAAATGTCCC...CATGCAAATTTCTAGGCCCTGGAGGTCCAAATAAGGTTTTCTAAGTCCCTCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270357.10
CDS-3UTR CCA 90 bp CCTGAGGGACTTAGAAAACCTTATTTGGACCTCCAGGGCCTAGAAATTTGCATGACTGTGTTGCTGCCCTaGGCAGGTGATTCTCAGTTG +
Preference number: 4 (lower is better)
Translates to: PEGLRKPYLDLQGLEICMTVLLP*AGDSQL
Trigger: CAACTGAGAATCACCTGCCCAGGGCAGCAACACAGT...CATGCAAATTTCTAGGCCCTGGAGGTCCAAATAAGGTTTTCTAAGTCCCTCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270357.10
CDS-3UTR CCA 90 bp CCTGAGGGACTTAGAAAACCTTATTTGGACCTCCAGGGCCTAGAAATTTGCATGCCCTGGCAAGGTGCCTaGAAACATTTGAGATCTCTG +
Preference number: 4 (lower is better)
Translates to: PEGLRKPYLDLQGLEICMPWQGA*KHLRSL
Trigger: CAGAGATCTCAAATGTTTCCAGGCACCTTGCCAGGG...CATGCAAATTTCTAGGCCCTGGAGGTCCAAATAAGGTTTTCTAAGTCCCTCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270357.10
3UTR CAA 72 bp AATCTCAGTTCTCCAAAACAAAACATGCCTGTCACCTaGTACCCATCTTGGGAAAGGATCACCACTGAGGCC +
Preference number: 4 (lower is better)
Translates to: NLSSPKQNMPVT*YPSWERITTEA
Trigger: GGCCTCAGTGGTGATCCTTTCCCAAGATGGGTACAAGGTGACAGGCATGTTTTGTTTTGGAGAACTGAGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270357.10
3UTR CAA 72 bp TTTTTCTGTTGCCTCTGTCTCAGGTGTAAGTTTGGGTaGAGTGGCCTGTTTTCCTTCACACTGTGTTGCTGC +
Preference number: 4 (lower is better)
Translates to: FFCCLCLRCKFG*SGLFSFTLCCC
Trigger: GCAGCAACACAGTGTGAAGGAAAACAGGCCACTCAACCCAAACTTACACCTGAGACAGAGGCAACAGAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000270357.10
CDS-3UTR GCA 90 bp CCTGAGGGACTTAGAAAACCTTATTTGGACCTCCAGGGCCTAGAAATTTGCATGTTTCCTAATGTTCTGTaGAAAGCATCTGGCCTTAGG +
Preference number: 4 (lower is better)
Translates to: PEGLRKPYLDLQGLEICMFPNVL*KASGLR
Trigger: CCTAAGGCCAGATGCTTTGCACAGAACATTAGGAAA...CATGCAAATTTCTAGGCCCTGGAGGTCCAAATAAGGTTTTCTAAGTCCCTCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270357.10
CDS-3UTR CCA 90 bp CCTGAGGGACTTAGAAAACCTTATTTGGACCTCCAGGGCCTAGAAATTTGCATGCCTTACCTTTACATCTaGAGTTTCCTAATGTTCTGT +
Preference number: 4 (lower is better)
Translates to: PEGLRKPYLDLQGLEICMPYLYI*SFLMFC
Trigger: ACAGAACATTAGGAAACTCCAGATGTAAAGGTAAGG...CATGCAAATTTCTAGGCCCTGGAGGTCCAAATAAGGTTTTCTAAGTCCCTCAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270357.10
CDS CCA 90 bp CGGCCTCGGCGCCGGGCGCCTGGCGGCAGCAGCACTGCGCGGCCATaGCCGCCGGCACTAGGTGAAATCCATGGGCGGCGGCCGCGCCGG +
Preference number: 5 (lower is better)
Translates to: RPRRRAPGGSSTARP*PPALGEIHGRRPRR
Trigger: CCGGCGCGGCCGCCGCCCATGGATTTCACCTAGTGCCGGCGGCCATGGCCGCGCAGTGCTGCTGCCGCCAGGCGCCCGGCGCCGAGGCCG
80% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270357.10
CDS GCA 90 bp GGGGCGTCGGTCGAGGTGTACCGCAGGATGACCTGGAAGGGCTGGTaGGCCTGCAGCTCGGGCGGCAGCGTGACGGTGAGCGAGGAGCCG +
Preference number: 5 (lower is better)
Translates to: GASVEVYRRMTWKGW*ACSSGGSVTVSEEP
Trigger: CGGCTCCTCGCTCACCGTCACGCTGCCGCCCGAGCTGCAGGCGCACCAGCCCTTCCAGGTCATCCTGCGGTACACCTCGACCGACGCCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270357.10
ENST00000486058.5
CDS GCA 90 bp GCCGCTCAGCTGCACTCAGCCACTGCTCCACTGCGCCCGACAGCTTaGTGGTGGCCGTGGGCAGGAGGCATGGCTCGGCCCACACGCGGC +
Preference number: 5 (lower is better)
Translates to: AAQLHSATAPLRPTA*WWPWAGGMARPTRG
Trigger: GCCGCGTGTGGGCCGAGCCATGCCTCCTGCCCACGGCCACCAGCAAGCTGTCGGGCGCAGTGGAGCAGTGGCTGAGTGCAGCTGAGCGGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270357.10
ENST00000486058.5
CDS CCA 90 bp GCGGGGGCGTCGGTCGAGGTGTACCGCAGGATGACCTGGAAGGGCTaGTGCGCCTGCAGCTCGGGCGGCAGCGTGACGGTGAGCGAGGAG +
Preference number: 5 (lower is better)
Translates to: AGASVEVYRRMTWKG*CACSSGGSVTVSEE
Trigger: CTCCTCGCTCACCGTCACGCTGCCGCCCGAGCTGCAGGCGCACCAGCCCTTCCAGGTCATCCTGCGGTACACCTCGACCGACGCCCCCGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000270357.10
ENST00000486058.5
CDS CCA 90 bp CTCCACTGCGCCCGACAGCTTGCTGGTGGCCGTGGGCAGGAGGCATaGCTCGGCCCACACGCGGCTCCTGGGCCCGATGTCTGCCGGCTT +
Preference number: 5 (lower is better)
Translates to: LHCARQLAGGRGQEA*LGPHAAPGPDVCRL
Trigger: AAGCCGGCAGACATCGGGCCCAGGAGCCGCGTGTGGGCCGAGCCATGCCTCCTGCCCACGGCCACCAGCAAGCTGTCGGGCGCAGTGGAG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270357.10
ENST00000486058.5
CDS CCA 90 bp CACTCAGCCACTGCTCCACTGCGCCCGACAGCTTGCTGGTGGCCGTaGGCAGGAGGCATGGCTCGGCCCACACGCGGCTCCTGGGCCCGA +
Preference number: 5 (lower is better)
Translates to: HSATAPLRPTACWWP*AGGMARPTRGSWAR
Trigger: TCGGGCCCAGGAGCCGCGTGTGGGCCGAGCCATGCCTCCTGCCCACGGCCACCAGCAAGCTGTCGGGCGCAGTGGAGCAGTGGCTGAGTG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270357.10
ENST00000486058.5
CDS CCA 90 bp CTGCGGTCCACAGCTGGAAAAGGGCCTCCACGGGCCGGGTCAGGCTaGATCCCTGAGACAGGTCCGGCTCAGCCAGCGGCGGGCCTGCCC +
Preference number: 5 (lower is better)
Translates to: LRSTAGKGPPRAGSG*IPETGPAQPAAGLP
Trigger: GGGCAGGCCCGCCGCTGGCTGAGCCGGACCTGTCTCAGGGATCCAGCCTGACCCGGCCCGTGGAGGCCCTTTTCCAGCTGTGGACCGCAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437406.1
CDS CCA 90 bp CACCAGATGGCGGGGGCGTCGGTCGAGGTGTACCGCAGGATGACCTaGAAGGGCTGGTGCGCCTGCAGCTCGGGCGGCAGCGTGACGGTG +
Preference number: 5 (lower is better)
Translates to: HQMAGASVEVYRRMT*KGWCACSSGGSVTV
Trigger: CACCGTCACGCTGCCGCCCGAGCTGCAGGCGCACCAGCCCTTCCAGGTCATCCTGCGGTACACCTCGACCGACGCCCCCGCCATCTGGTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000270357.10
ENST00000486058.5
CDS CCA 90 bp CAGCTGCACTCAGCCACTGCTCCACTGCGCCCGACAGCTTGCTGGTaGCCGTGGGCAGGAGGCATGGCTCGGCCCACACGCGGCTCCTGG +
Preference number: 5 (lower is better)
Translates to: QLHSATAPLRPTACW*PWAGGMARPTRGSW
Trigger: CCAGGAGCCGCGTGTGGGCCGAGCCATGCCTCCTGCCCACGGCCACCAGCAAGCTGTCGGGCGCAGTGGAGCAGTGGCTGAGTGCAGCTG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270357.10
ENST00000486058.5
CDS CCA 90 bp GCTCAGCTGCACTCAGCCACTGCTCCACTGCGCCCGACAGCTTGCTaGTGGCCGTGGGCAGGAGGCATGGCTCGGCCCACACGCGGCTCC +
Preference number: 5 (lower is better)
Translates to: AQLHSATAPLRPTAC*WPWAGGMARPTRGS
Trigger: GGAGCCGCGTGTGGGCCGAGCCATGCCTCCTGCCCACGGCCACCAGCAAGCTGTCGGGCGCAGTGGAGCAGTGGCTGAGTGCAGCTGAGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270357.10
ENST00000486058.5
CDS CCA 90 bp CTGCGGTCCACAGCTGGAAAAGGGCCTCCACGGGCCGGGTCAGGCTaGATCCCTGAGACAGGTCCGGCTCAGCCAGCGGCGGGCCTGTGG +
Preference number: 5 (lower is better)
Translates to: LRSTAGKGPPRAGSG*IPETGPAQPAAGLW
Trigger: CCACAGGCCCGCCGCTGGCTGAGCCGGACCTGTCTCAGGGATCCAGCCTGACCCGGCCCGTGGAGGCCCTTTTCCAGCTGTGGACCGCAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000270357.10
ENST00000451363.5
ENST00000464550.5
ENST00000471657.1
ENST00000481757.5
ENST00000486058.5
ENST00000493398.5
CDS GCA 90 bp AGGCAGCAGAGGCCCCGCCTGCCATCATACCCACGGCTCCCTGGCTaGAGGGTTGGGGGTCAGCCTCACCTGCCCGGCAGTCCACGCTCT +
Preference number: 5 (lower is better)
Translates to: RQQRPRLPSYPRLPG*RVGGQPHLPGSPRS
Trigger: AGAGCGTGGACTGCCGGGCAGGTGAGGCTGACCCCCAACCCTGCAGCCAGGGAGCCGTGGGTATGATGGCAGGCGGGGCCTCTGCTGCCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000481757.5
ENST00000498042.1
CDS TCA 90 bp CACAGCTGGAAAAGGGCCTCCACGGGCCGGGTCAGGCTGGATCCCTaGGACAGGTCCGGCTCAGCCAGCGGCGGGCCTGTGGCATTGAGC +
Preference number: 5 (lower is better)
Translates to: HSWKRASTGRVRLDP*DRSGSASGGPVALS
Trigger: GCTCAATGCCACAGGCCCGCCGCTGGCTGAGCCGGACCTGTCTCAGGGATCCAGCCTGACCCGGCCCGTGGAGGCCCTTTTCCAGCTGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000270357.10
ENST00000451363.5
ENST00000464550.5
ENST00000471657.1
ENST00000481757.5
ENST00000486058.5
ENST00000493398.5
CDS GCA 90 bp CCACCAGAGGCCTGCAGGGCACTGCAGGGCGTGCGCCAAGGTACGTaGTGGGCACAGGGGCAGCTAGTGGGCACTGCGGAGCCAGCACTT +
Preference number: 5 (lower is better)
Translates to: PPEACRALQGVRQGT*WAQGQLVGTAEPAL
Trigger: AAGTGCTGGCTCCGCAGTGCCCACTAGCTGCCCCTGTGCCCAGCACGTACCTTGGCGCACGCCCTGCAGTGCCCTGCAGGCCTCTGGTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000471657.1
ENST00000481757.5
ENST00000493398.5
CDS TCA 90 bp ATCCCTGAGACAGGTCCGGCTCAGCCAGCGGCGGGCCTGTGGCATTaGGCCAGCGCTCGAATTCCAGCCCTGCCCGGCAGTCCACGCTCT +
Preference number: 5 (lower is better)
Translates to: IPETGPAQPAAGLWH*ASARIPALPGSPRS
Trigger: AGAGCGTGGACTGCCGGGCAGGGCTGGAATTCGAGCGCTGGCTCAATGCCACAGGCCCGCCGCTGGCTGAGCCGGACCTGTCTCAGGGAT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000270357.10
ENST00000451363.5
ENST00000464550.5
ENST00000471657.1
ENST00000486058.5
ENST00000493398.5
CDS TCA 90 bp GGAGGGTGGCAGGAAGACAATGTCGTACCTGCACCGGGAGGGCGGTaGGGGTGGCAGACCTCGGGGCTCAGACTCCCACCCTGCACACCC +
Preference number: 5 (lower is better)
Translates to: GGWQEDNVVPAPGGR*GWQTSGLRLPPCTP
Trigger: GGGTGTGCAGGGTGGGAGTCTGAGCCCCGAGGTCTGCCACCCTCACCGCCCTCCCGGTGCAGGTACGACATTGTCTTCCTGCCACCCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486058.5
CDS GCA 90 bp GTAGGGCCCATACAGCCGCTCAGCTGCACTCAGCCACTGCTCCACTaGGCCCGACAGCTTGCTGGTGGCCGTGGGCAGGAGGCATGGCTC +
Preference number: 5 (lower is better)
Translates to: VGPIQPLSCTQPLLH*ARQLAGGRGQEAWL
Trigger: GAGCCATGCCTCCTGCCCACGGCCACCAGCAAGCTGTCGGGCGCAGTGGAGCAGTGGCTGAGTGCAGCTGAGCGGCTGTATGGGCCCTAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270357.10
ENST00000486058.5
CDS GCA 90 bp CGTGCGCCAAGGTACGTGCTGGGCACAGGGGCAGCTAGTGGGCACTaGGGAGCCAGCACTTGGCACGCAGGCCCTGCCAAGGGAGCAAAC +
Preference number: 5 (lower is better)
Translates to: RAPRYVLGTGAASGH*GASTWHAGPAKGAN
Trigger: GTTTGCTCCCTTGGCAGGGCCTGCGTGCCAAGTGCTGGCTCCGCAGTGCCCACTAGCTGCCCCTGTGCCCAGCACGTACCTTGGCGCACG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000471657.1
ENST00000481757.5
ENST00000493398.5
CDS GCA 90 bp CGGGGCCTACCTGCCCCACATGTAGGGCCCATACAGCCGCTCAGCTaGACTCAGCCACTGCTCCACTGCGCCCGACAGCTTGCTGGTGGC +
Preference number: 5 (lower is better)
Translates to: RGLPAPHVGPIQPLS*TQPLLHCARQLAGG
Trigger: GCCACCAGCAAGCTGTCGGGCGCAGTGGAGCAGTGGCTGAGTGCAGCTGAGCGGCTGTATGGGCCCTACATGTGGGGCAGGTAGGCCCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486058.5
CDS-3UTR CAA 90 bp AGGCATGGTGTGTGCGGGCTGGCCCCAGGGCCTGCAGTGCAAGAGAGCTGGGAGTCCAGCGCGAAGGACTaGAGGGCACCGGTGCAGAGG +
Preference number: 5 (lower is better)
Translates to: RHGVCGLAPGPAVQESWESSAKD*RAPVQR
Trigger: CCTCTGCACCGGTGCCCTCAAGTCCTTCGCGCTGGA...CTCCCAGCTCTCTTGCACTGCAGGCCCTGGGGCCAGCCCGCACACACCATGCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270357.10
ENST00000437406.1
CDS-3UTR CAA 90 bp CAGGAGGCATGGTGTGTGCGGGCTGGCCCCAGGGCCTGCAGTGCAAGAGAGCTGTCCAGCGCGAAGGACTaGAGGGCACCGGTGCAGAGG +
Preference number: 5 (lower is better)
Translates to: QEAWCVRAGPRACSARELSSAKD*RAPVQR
Trigger: CCTCTGCACCGGTGCCCTCAAGTCCTTCGCGCTGGA...CAGCTCTCTTGCACTGCAGGCCCTGGGGCCAGCCCGCACACACCATGCCTCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270357.10
ENST00000437406.1
CDS-3UTR CAA 90 bp CAGGAGGCATGGTGTGTGCGGGCTGGCCCCAGGGCCTGCAGTGCAAGAGAGCTGGACCCTAGACCAGAGTaGCCACCGCCACTGGAGGGG +
Preference number: 5 (lower is better)
Translates to: QEAWCVRAGPRACSARELDPRPE*PPPLEG
Trigger: CCCCTCCAGTGGCGGTGGCAACTCTGGTCTAGGGTC...CAGCTCTCTTGCACTGCAGGCCCTGGGGCCAGCCCGCACACACCATGCCTCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270357.10
CDS GCA 90 bp GATGTCAATGGCGCTGGCCGAGGCAGCTGCCTGGTCCAGAGGTTCTaGGGTCCACAGCTGGAAAAGGGCCTCCACGGGCCGGGTCAGGCT +
Preference number: 5 (lower is better)
Translates to: DVNGAGRGSCLVQRF*GPQLEKGLHGPGQA
Trigger: AGCCTGACCCGGCCCGTGGAGGCCCTTTTCCAGCTGTGGACCGCAGAACCTCTGGACCAGGCAGCTGCCTCGGCCAGCGCCATTGACATC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000270357.10
ENST00000437406.1
ENST00000451363.5
ENST00000464550.5
ENST00000471657.1
ENST00000481757.5
ENST00000486058.5
ENST00000493398.5
CDS GCA 90 bp CAAGCAGCAGGGCCTGTGCGTCCGAGTCTGTGTCTGCTTCAGCCTTaGCCAGCTCCGTGCTGGGCTCTGAGGCGGGCTCTGTGCTGGAGC +
Preference number: 5 (lower is better)
Translates to: QAAGPVRPSLCLLQP*PAPCWALRRALCWS
Trigger: GCTCCAGCACAGAGCCCGCCTCAGAGCCCAGCACGGAGCTGGGCAAGGCTGAAGCAGACACAGACTCGGACGCACAGGCCCTGCTGCTTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000270357.10
ENST00000437406.1
ENST00000481757.5
ENST00000486058.5
CDS-3UTR CAA 90 bp ATTAAGGCACAGTGTGGCGGTCACCATAGGGCTGCTGGGGCCCTTGCCCCGGGGCCCTGGGGTATTGCTTaGCCCCTGTGCCTCCCACCC +
Preference number: 5 (lower is better)
Translates to: IKAQCGGHHRAAGALAPGPWGIA*PLCLPP
Trigger: GGGTGGGAGGCACAGGGGCAAAGCAATACCCCAGGG...CCCCGGGGCAAGGGCCCCAGCAGCCCTATGGTGACCGCCACACTGTGCCTTAAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 2 transcripts:
ENST00000270357.10
ENST00000437406.1
CDS GCA 90 bp GCCTGCAGTTTGCTGACCGGGCTGTCCTCTCCCAGAAGCTTCATCTaGCGGTGCAGGGCGTCCAGGCGGAAGGCAGTCTCCAGGCAGGTG +
Preference number: 5 (lower is better)
Translates to: ACSLLTGLSSPRSFI*RCRASRRKAVSRQV
Trigger: CACCTGCCTGGAGACTGCCTTCCGCCTGGACGCCCTGCACCGGCAGATGAAGCTTCTGGGAGAGGACAGCCCGGTCAGCAAACTGCAGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451363.5
CDS GCA 90 bp CTGCAGGGTTGGGGGTCAGCCTCACCTGCCCGGCAGTCCACGCTCTaGTCCTTCAGCTCCGGGAAGAAGCTCAGGAAGGAGTCCAGCAGG +
Preference number: 5 (lower is better)
Translates to: LQGWGSASPARQSTL*SFSSGKKLRKESSR
Trigger: CCTGCTGGACTCCTTCCTGAGCTTCTTCCCGGAGCTGAAGGAGCAGAGCGTGGACTGCCGGGCAGGTGAGGCTGACCCCCAACCCTGCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000481757.5
ENST00000498042.1
CDS GCA 90 bp GCTGCTGTTCTCCAGCTCCAGGACACCCCCGTCACCCGCCCTTCCTaGACCAGGCCCTTTGCACACCTGGTTTCCATGGCCCGCTTCCTG +
Preference number: 5 (lower is better)
Translates to: AAVLQLQDTPVTRPS*TRPFAHLVSMARFL
Trigger: CAGGAAGCGGGCCATGGAAACCAGGTGTGCAAAGGGCCTGGTGCAGGAAGGGCGGGTGACGGGGGTGTCCTGGAGCTGGAGAACAGCAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000481757.5
CDS GCA 90 bp TGGCCACGATGGGGAAGGAGGGTGGCAGGAAGACAATGTCGTACCTaGACCGGGAGGGCGGTGAGGGTGGCAGACCTCGGGGCTCAGACT +
Preference number: 5 (lower is better)
Translates to: WPRWGRRVAGRQCRT*TGRAVRVADLGAQT
Trigger: AGTCTGAGCCCCGAGGTCTGCCACCCTCACCGCCCTCCCGGTGCAGGTACGACATTGTCTTCCTGCCACCCTCCTTCCCCATCGTGGCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486058.5
CDS-3UTR CAA 90 bp GGCAGGTGCTGGCATCCGGGGCTAGGCACAGCTGTCAGTGTTGAGACAGGAGGCGTGTCTGCTTCAGCCTaGCCCAGCTCCGTGCTGGGC +
Preference number: 5 (lower is better)
Translates to: GRCWHPGLGTAVSVETGGVSASA*PSSVLG
Trigger: GCCCAGCACGGAGCTGGGCAAGGCTGAAGCAGACAC...GCCTCCTGTCTCAACACTGACAGCTGTGCCTAGCCCCGGATGCCAGCACCTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270357.10
ENST00000437406.1
CDS-3UTR CAA 90 bp GCCCCAGACCCTAGACCAGAGTTGCCACCGCCACTGGAGGGGACTCATATGTCCCTGGGCCACGGCATGTaGGCCAGGTGTGCGTGGCAC +
Preference number: 5 (lower is better)
Translates to: APDPRPELPPPLEGTHMSLGHGM*ARCAWH
Trigger: GTGCCACGCACACCTGGCCAACATGCCGTGGCCCAG...GGACATATGAGTCCCCTCCAGTGGCGGTGGCAACTCTGGTCTAGGGTCTGGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270357.10
CDS TCA 90 bp GCAGCCGGCCCTGCGTCTGGTAGAAGACCTCCAGCGCGAAGGACTTaGGGGCACCGGTGCAGAGGTCCTCGTACAGCGGGATGGTGTACA +
Preference number: 5 (lower is better)
Translates to: AAGPASGRRPPARRT*GHRCRGPRTAGWCT
Trigger: TGTACACCATCCCGCTGTACGAGGACCTCTGCACCGGTGCCCTCAAGTCCTTCGCGCTGGAGGTCTTCTACCAGACGCAGGGCCGGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000270357.10
ENST00000437406.1
ENST00000481757.5
ENST00000486058.5
CDS TCA 90 bp AGCAAGGGCCAAGCGCCACTGTCCCTCACATGTCCAGATGTGTACTaGTGCCCTGGGCGTGCAGCGGCAGGGCCTCGGGGAAGACTGAGG +
Preference number: 5 (lower is better)
Translates to: SKGQAPLSLTCPDVY*CPGRAAAGPRGRLR
Trigger: CCTCAGTCTTCCCCGAGGCCCTGCCGCTGCACGCCCAGGGCATCAGTACACATCTGGACATGTGAGGGACAGTGGCGCTTGGCCCTTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460884.1
ENST00000481757.5
CDS TCA 90 bp ATCCCTGAGACAGGTCCGGCTCAGCCAGCGGCGGGCCTGTGGCATTaGGCCAGCGCTCGAATTCCAGCCCTAGAGGGGAGAAGTGACCCT +
Preference number: 5 (lower is better)
Translates to: IPETGPAQPAAGLWH*ASARIPALEGRSDP
Trigger: AGGGTCACTTCTCCCCTCTAGGGCTGGAATTCGAGCGCTGGCTCAATGCCACAGGCCCGCCGCTGGCTGAGCCGGACCTGTCTCAGGGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481757.5
CDS GCA 90 bp ACCTGCAGTTTGCTGACCGGGCTGTCCTCTCCCAGAAGCTTCATCTaGCGGTGCAGGGCGTCCAGGCGGAAGGCAGTCTCCAGGCAGGTG +
Preference number: 5 (lower is better)
Translates to: TCSLLTGLSSPRSFI*RCRASRRKAVSRQV
Trigger: CACCTGCCTGGAGACTGCCTTCCGCCTGGACGCCCTGCACCGGCAGATGAAGCTTCTGGGAGAGGACAGCCCGGTCAGCAAACTGCAGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000270357.10
ENST00000481757.5
ENST00000486058.5
CDS GCA 90 bp CTCCTGCGGCAGCGGGGACCCATCCAGGAGCCGGTCCAGGAAGAGTaGTGTCTGGAAGGTCCTCCACTTGGAGATGTCAATGGCGCTGGC +
Preference number: 5 (lower is better)
Translates to: LLRQRGPIQEPVQEE*CLEGPPLGDVNGAG
Trigger: GCCAGCGCCATTGACATCTCCAAGTGGAGGACCTTCCAGACAGCACTCTTCCTGGACCGGCTCCTGGATGGGTCCCCGCTGCCGCAGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000270357.10
ENST00000437406.1
ENST00000464550.5
ENST00000471657.1
ENST00000481757.5
ENST00000486058.5
CDS GCA 90 bp ACCCTGCGGCAGCGGGGACCCATCCAGGAGCCGGTCCAGGAAGAGTaGTGTCTGGAAGGTCCTCCACTTGGAGATGTCAATGGCGCTGGC +
Preference number: 5 (lower is better)
Translates to: TLRQRGPIQEPVQEE*CLEGPPLGDVNGAG
Trigger: GCCAGCGCCATTGACATCTCCAAGTGGAGGACCTTCCAGACAGCACTCTTCCTGGACCGGCTCCTGGATGGGTCCCCGCTGCCGCAGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493398.5
CDS-3UTR CAA 90 bp GCCCCAGACCCTAGACCAGAGTTGCCACCGCCACTGGAGGGGACTCATATGTCCGGGAAGAAGGAGCGGTaGCACACGGAGTGGCCCTGG +
Preference number: 5 (lower is better)
Translates to: APDPRPELPPPLEGTHMSGKKER*HTEWPW
Trigger: CCAGGGCCACTCCGTGTGCAACCGCTCCTTCTTCCC...GGACATATGAGTCCCCTCCAGTGGCGGTGGCAACTCTGGTCTAGGGTCTGGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270357.10
CDS-3UTR CAA 90 bp GGTTGCAGCCCCTGTGGTTGTAGGCCCCTTAGAACTTCCACTGCCAGTGTGAGCACTGCGCCCGACAGCTaGCTGGTGGCCGTGGGCAGG +
Preference number: 5 (lower is better)
Translates to: GCSPCGCRPLRTSTASVSTAPDS*LVAVGR
Trigger: CCTGCCCACGGCCACCAGCAAGCTGTCGGGCGCAGT...GCTCACACTGGCAGTGGAAGTTCTAAGGGGCCTACAACCACAGGGGCTGCAACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270357.10
CDS-3UTR CAA 90 bp AGACGTGCTGCTTCTGGGCCACGGCATGTTGGCCAGGTGTGCGTGGCACTGAGAGGTGGCGCCACATCCTaGGGGACTGTGAAGGGCAGC +
Preference number: 5 (lower is better)
Translates to: RRAASGPRHVGQVCVALRGGATS*GTVKGS
Trigger: GCTGCCCTTCACAGTCCCCAAGGATGTGGCGCCACC...TCTCAGTGCCACGCACACCTGGCCAACATGCCGTGGCCCAGAAGCAGCACGTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270357.10
CDS TCA 90 bp CCACAGCCAGAACACACGAAGGGCAGGCAAGGAGGCCTTGAGGGGTaGCATCCCCAGTTGTGGGAGCGGGTCCTGAGGAGCAGGTACCTG +
Preference number: 5 (lower is better)
Translates to: PQPEHTKGRQGGLEG*HPQLWERVLRSRYL
Trigger: CAGGTACCTGCTCCTCAGGACCCGCTCCCACAACTGGGGATGTCACCCCTCAAGGCCTCCTTGCCTGCCCTTCGTGTGTTCTGGCTGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481757.5
CDS TCA 90 bp TGTACTGATGCCCTGGGCGTGCAGCGGCAGGGCCTCGGGGAAGACTaGGGACTCACACACCACTGTGACTGCTGCTCAGAGCCAGGGAAG +
Preference number: 5 (lower is better)
Translates to: CTDALGVQRQGLGED*GLTHHCDCCSEPGK
Trigger: CTTCCCTGGCTCTGAGCAGCAGTCACAGTGGTGTGTGAGTCCTCAGTCTTCCCCGAGGCCCTGCCGCTGCACGCCCAGGGCATCAGTACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481757.5
CDS GCA 90 bp AATGTCGTACCTGCCCCACATGTAGGGCCCATACAGCCGCTCAGCTaGACTCAGCCACTGCTCCACTGCGCCCGACAGCTTGCTGGTGGC +
Preference number: 5 (lower is better)
Translates to: NVVPAPHVGPIQPLS*TQPLLHCARQLAGG
Trigger: GCCACCAGCAAGCTGTCGGGCGCAGTGGAGCAGTGGCTGAGTGCAGCTGAGCGGCTGTATGGGCCCTACATGTGGGGCAGGTACGACATT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270357.10
CDS GCA 90 bp AGTTTGCTGACCGGGCTGTCCTCTCCCAGAAGCTTCATCTGCCGGTaGAGGGCGTCCAGGCGGAAGGCAGTCTCCAGGCAGGTGAAGGCA +
Preference number: 5 (lower is better)
Translates to: SLLTGLSSPRSFICR*RASRRKAVSRQVKA
Trigger: TGCCTTCACCTGCCTGGAGACTGCCTTCCGCCTGGACGCCCTGCACCGGCAGATGAAGCTTCTGGGAGAGGACAGCCCGGTCAGCAAACT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000270357.10
ENST00000451363.5
ENST00000481757.5
ENST00000486058.5
CDS CCA 90 bp GTCCTCCACTTGGAGATGTCAATGGCGCTGGCCGAGGCAGCTGCCTaGTCCAGAGGTTCTGCGGTCCACAGCTGGAAAAGGGCCTCCACG +
Preference number: 5 (lower is better)
Translates to: VLHLEMSMALAEAAA*SRGSAVHSWKRAST
Trigger: CGTGGAGGCCCTTTTCCAGCTGTGGACCGCAGAACCTCTGGACCAGGCAGCTGCCTCGGCCAGCGCCATTGACATCTCCAAGTGGAGGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000270357.10
ENST00000437406.1
ENST00000451363.5
ENST00000464550.5
ENST00000471657.1
ENST00000481757.5
ENST00000486058.5
ENST00000493398.5
CDS CCA 90 bp CCAAGCGCCACTGTCCCTCACATGTCCAGATGTGTACTGATGCCCTaGGCGTGCAGCGGCAGGGCCTCGGGGAAGACTGAGGACTCACAC +
Preference number: 5 (lower is better)
Translates to: PSATVPHMSRCVLMP*ACSGRASGKTEDSH
Trigger: GTGTGAGTCCTCAGTCTTCCCCGAGGCCCTGCCGCTGCACGCCCAGGGCATCAGTACACATCTGGACATGTGAGGGACAGTGGCGCTTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460884.1
ENST00000481757.5
CDS CCA 90 bp CAATCTGCCCAGGAGACCCCAGACCCTGAGTGTGTTCCAGGCAGGTaGCCTGTTCCAGGGACGTGGGCTGTTCAGGAAGGCGGAGTCAGC +
Preference number: 5 (lower is better)
Translates to: QSAQETPDPECVPGR*PVPGTWAVQEGGVS
Trigger: GCTGACTCCGCCTTCCTGAACAGCCCACGTCCCTGGAACAGGCCACCTGCCTGGAACACACTCAGGGTCTGGGGTCTCCTGGGCAGATTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481757.5
CDS-3UTR CAA 90 bp GGGCACAGAGCCAAGACAGATTGTGGTGAGGGTGCCATCCTGGATCCAGATGCCCCGATGTCTGCCGGCTaGAGGTCTCCGGCCACCAGG +
Preference number: 5 (lower is better)
Translates to: GHRAKTDCGEGAILDPDAPMSAG*RSPATR
Trigger: CCTGGTGGCCGGAGACCTCAAGCCGGCAGACATCGG...GGCATCTGGATCCAGGATGGCACCCTCACCACAATCTGTCTTGGCTCTGTGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270357.10
CDS TCA 90 bp CTGGGGCCCACATGGTCCAGCAAGGGTTGGCTGAAGGACAGACAGTaGACTGACAGGGCTTTCCTCCAGGTGGAGTGGCCCCTCAGGCAG +
Preference number: 5 (lower is better)
Translates to: LGPTWSSKGWLKDRQ*TDRAFLQVEWPLRQ
Trigger: CTGCCTGAGGGGCCACTCCACCTGGAGGAAAGCCCTGTCAGTTCACTGTCTGTCCTTCAGCCAACCCTTGCTGGACCATGTGGGCCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000481757.5
ENST00000498042.1
CDS GCA 90 bp GGGGTGCTCCATGTGGAAGTGGAAGACGCCTTCTTCCTCCATGTATaGACTCCGGGTGGCACTCATCAGCACCTGCACCCCCGATGGCGC +
Preference number: 5 (lower is better)
Translates to: GVLHVEVEDAFFLHV*TPGGTHQHLHPRWR
Trigger: GCGCCATCGGGGGTGCAGGTGCTGATGAGTGCCACCCGGAGTGCATACATGGAGGAAGAAGGCGTCTTCCACTTCCACATGGAGCACCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000270357.10
ENST00000486058.5
CDS GCA 90 bp GAAGGTCCTCCACTTGGAGATGTCAATGGCGCTGGCCGAGGCAGCTaGCTGGTCCAGAGGTTCTGCGGTCCACAGCTGGAAAAGGGCCTC +
Preference number: 5 (lower is better)
Translates to: EGPPLGDVNGAGRGS*LVQRFCGPQLEKGL
Trigger: GAGGCCCTTTTCCAGCTGTGGACCGCAGAACCTCTGGACCAGGCAGCTGCCTCGGCCAGCGCCATTGACATCTCCAAGTGGAGGACCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000270357.10
ENST00000437406.1
ENST00000451363.5
ENST00000464550.5
ENST00000471657.1
ENST00000481757.5
ENST00000486058.5
ENST00000493398.5
CDS GCA 90 bp GCCACTGTCCCTCACATGTCCAGATGTGTACTGATGCCCTGGGCGTaGAGCGGCAGGGCCTCGGGGAAGACTGAGGACTCACACACCACT +
Preference number: 5 (lower is better)
Translates to: ATVPHMSRCVLMPWA*SGRASGKTEDSHTT
Trigger: AGTGGTGTGTGAGTCCTCAGTCTTCCCCGAGGCCCTGCCGCTGCACGCCCAGGGCATCAGTACACATCTGGACATGTGAGGGACAGTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460884.1
ENST00000481757.5
CDS GCA 90 bp GTGGGAGCGGGTCCTGAGGAGCAGGTACCTGGCTCCAGCTTGACCTaGAGTTTGCTGACCGGGCTGTCCTCTCCCAGAAGCTTCATCTGC +
Preference number: 5 (lower is better)
Translates to: VGAGPEEQVPGSSLT*SLLTGLSSPRSFIC
Trigger: GCAGATGAAGCTTCTGGGAGAGGACAGCCCGGTCAGCAAACTGCAGGTCAAGCTGGAGCCAGGTACCTGCTCCTCAGGACCCGCTCCCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481757.5
CDS CCA 90 bp CCAGGAAGAGTGCTGTCTGGAAGGTCCTCCACTTGGAGATGTCAATaGCGCTGGCCGAGGCAGCTGCCTGGTCCAGAGGTTCTGCGGTCC +
Preference number: 5 (lower is better)
Translates to: PGRVLSGRSSTWRCQ*RWPRQLPGPEVLRS
Trigger: GGACCGCAGAACCTCTGGACCAGGCAGCTGCCTCGGCCAGCGCCATTGACATCTCCAAGTGGAGGACCTTCCAGACAGCACTCTTCCTGG
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000270357.10
ENST00000437406.1
ENST00000464550.5
ENST00000471657.1
ENST00000481757.5
ENST00000486058.5
ENST00000493398.5
CDS CCA 90 bp GCAGTCATGGCAGGCCTGGCCCACAGAAGGCACAATTGTGGTGTCTaGGAGGTCGAGGGTCAGCCCGCCAACAGGGCTAGGCAGACACAT +
Preference number: 5 (lower is better)
Translates to: AVMAGLAHRRHNCGV*EVEGQPANRARQTH
Trigger: ATGTGTCTGCCTAGCCCTGTTGGCGGGCTGACCCTCGACCTCCCAGACACCACAATTGTGCCTTCTGTGGGCCAGGCCTGCCATGACTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000270357.10
ENST00000437406.1
ENST00000481757.5
ENST00000486058.5
CDS CCA 90 bp CCCGGGCAGGGGGCTGCTCACTCGGAGAAAGTCATCAAAGCGCTGTaGGTCTCCGCAGAGCTGGGACAGGTAGTACACGAAGCAGTAGCC +
Preference number: 5 (lower is better)
Translates to: PGQGAAHSEKVIKAL*VSAELGQVVHEAVA
Trigger: GGCTACTGCTTCGTGTACTACCTGTCCCAGCTCTGCGGAGACCCACAGCGCTTTGATGACTTTCTCCGAGTGAGCAGCCCCCTGCCCGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000481757.5
ENST00000493398.5
CDS CCA 90 bp CATGCACAGCCCTCCCAGTGGCACCTCACCACCCTCCAGCAATTCTaGCCTCTCCCTCAATGTCTGAACCCTGCAGTGCCTTCCTGGGCC +
Preference number: 5 (lower is better)
Translates to: HAQPSQWHLTTLQQF*PLPQCLNPAVPSWA
Trigger: GGCCCAGGAAGGCACTGCAGGGTTCAGACATTGAGGGAGAGGCCAGAATTGCTGGAGGGTGGTGAGGTGCCACTGGGAGGGCTGTGCATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481757.5
CDS-3UTR CAA 90 bp ATGACGCTGGGCACTGCTGCTGAGTTTCCCAAAGCCAGGTGTCAGGCACAGGTGGTGTCTGCTTCAGCCTaGCCCAGCTCCGTGCTGGGC +
Preference number: 5 (lower is better)
Translates to: MTLGTAAEFPKARCQAQVVSASA*PSSVLG
Trigger: GCCCAGCACGGAGCTGGGCAAGGCTGAAGCAGACAC...CACCTGTGCCTGACACCTGGCTTTGGGAAACTCAGCAGCAGTGCCCAGCGTCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270357.10
CDS-3UTR CAA 90 bp GTGTTGAGACAGGAGGCATGGTGTGTGCGGGCTGGCCCCAGGGCCTGCAGTGCACCACAGAAGGCACAATaGTGGTGTCTGGGAGGTCGA +
Preference number: 5 (lower is better)
Translates to: VLRQEAWCVRAGPRACSAPQKAQ*WCLGGR
Trigger: TCGACCTCCCAGACACCACAATTGTGCCTTCTGTGG...TGCACTGCAGGCCCTGGGGCCAGCCCGCACACACCATGCCTCCTGTCTCAACAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270357.10
ENST00000437406.1
CDS-3UTR CAA 90 bp GTGTTGAGACAGGAGGCATGGTGTGTGCGGGCTGGCCCCAGGGCCTGCAGTGCAGCACAGCTGTCAGTGTaGAGACAGGAGGCATGGTGT +
Preference number: 5 (lower is better)
Translates to: VLRQEAWCVRAGPRACSAAQLSV*RQEAWC
Trigger: ACACCATGCCTCCTGTCTCAACACTGACAGCTGTGC...TGCACTGCAGGCCCTGGGGCCAGCCCGCACACACCATGCCTCCTGTCTCAACAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270357.10
ENST00000437406.1
CDS-3UTR CAA 90 bp GCACCACCTCCCACTTTCCCTGGGGTATTGCTTTGCCCCTGTGCCTCCCACCCCACTTTCCCTGGGGTATaGCTTTGCCCCTGTGCCTCC +
Preference number: 5 (lower is better)
Translates to: APPPTFPGVLLCPCASHPTFPGV*LCPCAS
Trigger: GGAGGCACAGGGGCAAAGCAATACCCCAGGGAAAGT...GGGGTGGGAGGCACAGGGGCAAAGCAATACCCCAGGGAAAGTGGGAGGTGGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 2 transcripts:
ENST00000270357.10
ENST00000437406.1
CDS TCA 90 bp GCCCACATGGTCCAGCAAGGGTTGGCTGAAGGACAGACAGTGAACTaGCAGGGCTTTCCTCCAGGTGGAGTGGCCCCTCAGGCAGCAGAG +
Preference number: 5 (lower is better)
Translates to: AHMVQQGLAEGQTVN*QGFPPGGVAPQAAE
Trigger: CTCTGCTGCCTGAGGGGCCACTCCACCTGGAGGAAAGCCCTGTCAGTTCACTGTCTGTCCTTCAGCCAACCCTTGCTGGACCATGTGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000481757.5
ENST00000498042.1
CDS TCA 90 bp AGGGGCTTCTGTGAAGGGGTACAGGGAAGCAGAGACTTGGGTTGGTaGCCAAGGGACTCGCACCCACTCCACGCCTCTCCTGGGTGGAAG +
Preference number: 5 (lower is better)
Translates to: RGFCEGVQGSRDLGW*PRDSHPLHASPGWK
Trigger: CTTCCACCCAGGAGAGGCGTGGAGTGGGTGCGAGTCCCTTGGTCACCAACCCAAGTCTCTGCTTCCCTGTACCCCTTCACAGAAGCCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481757.5
CDS CCA 90 bp AGAGTGCTGTCTGGAAGGTCCTCCACTTGGAGATGTCAATGGCGCTaGCCGAGGCAGCTGCCTGGTCCAGAGGTTCTGCGGTCCACAGCT +
Preference number: 5 (lower is better)
Translates to: RVLSGRSSTWRCQWR*PRQLPGPEVLRSTA
Trigger: AGCTGTGGACCGCAGAACCTCTGGACCAGGCAGCTGCCTCGGCCAGCGCCATTGACATCTCCAAGTGGAGGACCTTCCAGACAGCACTCT
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000270357.10
ENST00000437406.1
ENST00000451363.5
ENST00000464550.5
ENST00000471657.1
ENST00000481757.5
ENST00000486058.5
ENST00000493398.5
CDS-3UTR CAA 90 bp CACAGAAGGCACAATTGTGGTGTCTGGGAGGTCGAGGGTCAGCCCGCCAACAGGTCTTCCCACGTGGCGTaGGTGACAGCGTTGCCGAAC +
Preference number: 5 (lower is better)
Translates to: HRRHNCGVWEVEGQPANRSSHVA*VTALPN
Trigger: GTTCGGCAACGCTGTCACCAACGCCACGTGGGAAGA...CCTGTTGGCGGGCTGACCCTCGACCTCCCAGACACCACAATTGTGCCTTCTGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270357.10
CDS-3UTR CAA 90 bp GTGAAGGTGACACATGGCTTTCCTGTGACATCCAGAGGCTACTCAGGCCCAGGGGGCGGGCCTGTGGCATaGAGCCAGCGCTCGAATTCC +
Preference number: 5 (lower is better)
Translates to: VKVTHGFPVTSRGYSGPGGGPVA*SQRSNS
Trigger: GGAATTCGAGCGCTGGCTCAATGCCACAGGCCCGCC...CCCTGGGCCTGAGTAGCCTCTGGATGTCACAGGAAAGCCATGTGTCACCTTCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000270357.10
CDS-3UTR CAA 90 bp GGCAGGTGCTGGCATCCGGGGCTAGGCACAGCTGTCAGTGTTGAGACAGGAGGCTGGAAGGTCCTCCACTaGGAGATGTCAATGGCGCTG +
Preference number: 5 (lower is better)
Translates to: GRCWHPGLGTAVSVETGGWKVLH*EMSMAL
Trigger: CAGCGCCATTGACATCTCCAAGTGGAGGACCTTCCA...GCCTCCTGTCTCAACACTGACAGCTGTGCCTAGCCCCGGATGCCAGCACCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270357.10
ENST00000437406.1
CDS-3UTR CAA 90 bp ACAGAGCCAAGACAGATTGTGGTGAGGGTGCCATCCTGGATCCAGATGCCCTCCCCCTGGGGTATTGCTTaGCCCCTGTGCCTCCCACCC +
Preference number: 5 (lower is better)
Translates to: TEPRQIVVRVPSWIQMPSPWGIA*PLCLPP
Trigger: GGGTGGGAGGCACAGGGGCAAAGCAATACCCCAGGG...GGAGGGCATCTGGATCCAGGATGGCACCCTCACCACAATCTGTCTTGGCTCTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000270357.10
CDS-3UTR CAA 90 bp AGACGTGCTGCTTCTGGGCCACGGCATGTTGGCCAGGTGTGCGTGGCACTGAGACACAGAGAACATGACTaGGGGGAGTGGGGTGTCCAC +
Preference number: 5 (lower is better)
Translates to: RRAASGPRHVGQVCVALRHREHD*GEWGVH
Trigger: GTGGACACCCCACTCCCCCAAGTCATGTTCTCTGTG...TCTCAGTGCCACGCACACCTGGCCAACATGCCGTGGCCCAGAAGCAGCACGTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000270357.10
CDS-3UTR CAA 90 bp AGGGGCAGTGGCAGTCTTCTAGTTCCTAGGTCTCTGGATGGGGTGGCGCCTCCCCATCTGCCCCCGCTTTaGTGCATATGGTGGGGTTGC +
Preference number: 5 (lower is better)
Translates to: RGSGSLLVPRSLDGVAPPHLPPL*CIWWGC
Trigger: GCAACCCCACCATATGCACAAAAGCGGGGGCAGATG...GGGAGGCGCCACCCCATCCAGAGACCTAGGAACTAGAAGACTGCCACTGCCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 1 transcripts:
ENST00000270357.10
CDS-3UTR CAA 90 bp ACATTAAGGCACAGTGTGGCGGTCACCATAGGGCTGCTGGGGCCCTTGCCCCGGGCCTCAGCTCCGTCGTaGTCATTAGTGCTGTTTGCC +
Preference number: 5 (lower is better)
Translates to: TLRHSVAVTIGLLGPLPRASAPS*SLVLFA
Trigger: GGCAAACAGCACTAATGACAACGACGGAGCTGAGGC...CCGGGGCAAGGGCCCCAGCAGCCCTATGGTGACCGCCACACTGTGCCTTAATGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270357.10
CDS-3UTR CAA 90 bp GTGTTGAGACAGGAGGCATGGTGTGTGCGGGCTGGCCCCAGGGCCTGCAGTGCACCAGGGCCTAGAAATTaGCATGGGTCTCCTTCACTG +
Preference number: 5 (lower is better)
Translates to: VLRQEAWCVRAGPRACSAPGPRN*HGSPSL
Trigger: CAGTGAAGGAGACCCATGCAAATTTCTAGGCCCTGG...TGCACTGCAGGCCCTGGGGCCAGCCCGCACACACCATGCCTCCTGTCTCAACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270357.10
CDS-3UTR CAA 90 bp ACATTAAGGCACAGTGTGGCGGTCACCATAGGGCTGCTGGGGCCCTTGCCCCGGTTCCTTCACACTGTGTaGCTGCCCTGGGCAGGTGAT +
Preference number: 5 (lower is better)
Translates to: TLRHSVAVTIGLLGPLPRFLHTV*LPWAGD
Trigger: ATCACCTGCCCAGGGCAGCAACACAGTGTGAAGGAA...CCGGGGCAAGGGCCCCAGCAGCCCTATGGTGACCGCCACACTGTGCCTTAATGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270357.10
CDS TCA 90 bp AGAAGCTCAGGAAGGAGTCCAGCAGGTCCTGGGCCACCACGCTGGTaGACTTGTACTTCTCCACATAGGCCTGTGTGGCAGAGGTGGGGC +
Preference number: 5 (lower is better)
Translates to: RSSGRSPAGPGPPRW*TCTSPHRPVWQRWG
Trigger: GCCCCACCTCTGCCACACAGGCCTATGTGGAGAAGTACAAGTTCACCAGCGTGGTGGCCCAGGACCTGCTGGACTCCTTCCTGAGCTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000471657.1
ENST00000481757.5
ENST00000493398.5
CDS GCA 90 bp TCTCCAGGAAGCGCCGCACCCTGTGGAGGTCAGGATAGTAGTCGTTaGGGACCACAATCTGCAGCCAGCGGATGCGGATCTCAGCGTTCA +
Preference number: 5 (lower is better)
Translates to: SPGSAAPCGGQDSSR*GPQSAASGCGSQRS
Trigger: TGAACGCTGAGATCCGCATCCGCTGGCTGCAGATTGTGGTCCGCAACGACTACTATCCTGACCTCCACAGGGTGCGGCGCTTCCTGGAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000270357.10
ENST00000437406.1
ENST00000464550.5
ENST00000471657.1
ENST00000481757.5
ENST00000486058.5
CDS TCA 90 bp TGGCGACCGGCGGCTGCTTCCTTCCGGGTTGATGAAAAGGTTGCATaGGTCATGAGGAGCTTATCTAGAGAGGCCAGCGGCAGGCAAGCC +
Preference number: 5 (lower is better)
Translates to: WRPAAASFRVDEKVA*VMRSLSREASGRQA
Trigger: GGCTTGCCTGCCGCTGGCCTCTCTAGATAAGCTCCTCATGACTCATGCAACCTTTTCATCAACCCGGAAGGAAGCAGCCGCCGGTCGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451363.5
CDS TCA 90 bp CAAGGGACTCGCACCCACTCCACGCCTCTCCTGGGTGGAAGACAATaGAGTAGTCTAAACCCAACCTCAGTGCTGGTGGAGGCCACCTGC +
Preference number: 5 (lower is better)
Translates to: QGTRTHSTPLLGGRQ*SSLNPTSVLVEATC
Trigger: GCAGGTGGCCTCCACCAGCACTGAGGTTGGGTTTAGACTACTTCATTGTCTTCCACCCAGGAGAGGCGTGGAGTGGGTGCGAGTCCCTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481757.5
CDS-3UTR CAA 90 bp TGGGCACTGCTGCTGAGTTTCCCAAAGCCAGGTGTCAGGCACAGGTGCGCAGCTGCACAGCTGTCAGTGTaGAGACAGGAGGCATGGTGT +
Preference number: 5 (lower is better)
Translates to: WALLLSFPKPGVRHRCAAAQLSV*RQEAWC
Trigger: ACACCATGCCTCCTGTCTCAACACTGACAGCTGTGC...AGCTGCGCACCTGTGCCTGACACCTGGCTTTGGGAAACTCAGCAGCAGTGCCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270357.10
CDS-3UTR CAA 90 bp TGGGCACTGCTGCTGAGTTTCCCAAAGCCAGGTGTCAGGCACAGGTGCGCAGCTTGTGACTGCTGGGACTaGAAAACAACCTTGGCGGGG +
Preference number: 5 (lower is better)
Translates to: WALLLSFPKPGVRHRCAACDCWD*KTTLAG
Trigger: CCCCGCCAAGGTTGTTTTCAAGTCCCAGCAGTCACA...AGCTGCGCACCTGTGCCTGACACCTGGCTTTGGGAAACTCAGCAGCAGTGCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270357.10
CDS-3UTR CAA 90 bp ACATTAAGGCACAGTGTGGCGGTCACCATAGGGCTGCTGGGGCCCTTGCCCCGGTATCTAGTGGAGAGGTaGGGAAACAACACTGGCCTG +
Preference number: 5 (lower is better)
Translates to: TLRHSVAVTIGLLGPLPRYLVER*GNNTGL
Trigger: CAGGCCAGTGTTGTTTCCCAACCTCTCCACTAGATA...CCGGGGCAAGGGCCCCAGCAGCCCTATGGTGACCGCCACACTGTGCCTTAATGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270357.10
CDS TCA 90 bp CGGCGGCTGCTTCCTTCCGGGTTGATGAAAAGGTTGCATGAGTCATaGGGAGCTTATCTAGAGAGGCCAGCGGCAGGCAAGCCCTCCACA +
Preference number: 5 (lower is better)
Translates to: RRLLPSGLMKRLHES*GAYLERPAAGKPST
Trigger: TGTGGAGGGCTTGCCTGCCGCTGGCCTCTCTAGATAAGCTCCTCATGACTCATGCAACCTTTTCATCAACCCGGAAGGAAGCAGCCGCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451363.5
CDS GCA 90 bp GGTCAGGATAGTAGTCGTTGCGGACCACAATCTGCAGCCAGCGGATaGGGATCTCAGCGTTCATCGAGTCCAGCAGGGAGGAGTAGCACT +
Preference number: 5 (lower is better)
Translates to: GQDSSRCGPQSAASG*GSQRSSSPAGRSST
Trigger: AGTGCTACTCCTCCCTGCTGGACTCGATGAACGCTGAGATCCGCATCCGCTGGCTGCAGATTGTGGTCCGCAACGACTACTATCCTGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000270357.10
ENST00000437406.1
ENST00000464550.5
ENST00000471657.1
ENST00000481757.5
ENST00000486058.5
ENST00000493398.5
CDS GCA 90 bp CTTCTCGTAGGTGAACAGGTTCATCAGGTGGCTGGGATTCACTCCTaGAAGGTGAACACCCACCTGGGCTGGCGTCCGAAACCACCAGTG +
Preference number: 5 (lower is better)
Translates to: LLVGEQVHQVAGIHS*KVNTHLGWRPKPPV
Trigger: CACTGGTGGTTTCGGACGCCAGCCCAGGTGGGTGTTCACCTTGCAGGAGTGAATCCCAGCCACCTGATGAACCTGTTCACCTACGAGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000460884.1
ENST00000481757.5
CDS-3UTR CAA 90 bp ATGACGCTGGGCACTGCTGCTGAGTTTCCCAAAGCCAGGTGTCAGGCACAGGTGCCACAGAAGGCACAATaGTGGTGTCTGGGAGGTCGA +
Preference number: 5 (lower is better)
Translates to: MTLGTAAEFPKARCQAQVPQKAQ*WCLGGR
Trigger: TCGACCTCCCAGACACCACAATTGTGCCTTCTGTGG...CACCTGTGCCTGACACCTGGCTTTGGGAAACTCAGCAGCAGTGCCCAGCGTCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270357.10
CDS-3UTR CAA 90 bp TGGGCACTGCTGCTGAGTTTCCCAAAGCCAGGTGTCAGGCACAGGTGCGCAGCTGACTTGAAAACAACCTaGGCGGGGAAGAGGCTGAGA +
Preference number: 5 (lower is better)
Translates to: WALLLSFPKPGVRHRCAADLKTT*AGKRLR
Trigger: TCTCAGCCTCTTCCCCGCCAAGGTTGTTTTCAAGTC...AGCTGCGCACCTGTGCCTGACACCTGGCTTTGGGAAACTCAGCAGCAGTGCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270357.10
CDS-3UTR CAA 90 bp GCACCACCTCCCACTTTCCCTGGGGTATTGCTTTGCCCCTGTGCCTCCCACCCCCATGAGAAAGCTTTGTaGTGTGAGACGTCTGCGCTT +
Preference number: 5 (lower is better)
Translates to: APPPTFPGVLLCPCASHPHEKAL*CETSAL
Trigger: AAGCGCAGACGTCTCACACAACAAAGCTTTCTCATG...GGGGTGGGAGGCACAGGGGCAAAGCAATACCCCAGGGAAAGTGGGAGGTGGTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000270357.10
CDS-3UTR CAA 90 bp GGTGTGAGGGGCAGTGGCAGTCTTCTAGTTCCTAGGTCTCTGGATGGGGTGGCGAACATGCCTGTCACCTaGTACCCATCTTGGGAAAGG +
Preference number: 5 (lower is better)
Translates to: GVRGSGSLLVPRSLDGVANMPVT*YPSWER
Trigger: CCTTTCCCAAGATGGGTACAAGGTGACAGGCATGTT...CGCCACCCCATCCAGAGACCTAGGAACTAGAAGACTGCCACTGCCCCTCACACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270357.10
CDS-3UTR CAA 90 bp GTGAAGGTGACACATGGCTTTCCTGTGACATCCAGAGGCTACTCAGGCCCAGGGCTGAGCAGGGCTCCTTaGAGGACACCATCAAGCATG +
Preference number: 5 (lower is better)
Translates to: VKVTHGFPVTSRGYSGPGLSRAP*RTPSSM
Trigger: CATGCTTGATGGTGTCCTCAAAGGAGCCCTGCTCAG...CCCTGGGCCTGAGTAGCCTCTGGATGTCACAGGAAAGCCATGTGTCACCTTCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270357.10
CDS-3UTR CAA 90 bp AGGGGCAGTGGCAGTCTTCTAGTTCCTAGGTCTCTGGATGGGGTGGCGCCTCCCAGGTGTAAGTTTGGGTaGAGTGGCCTGTTTTCCTTC +
Preference number: 5 (lower is better)
Translates to: RGSGSLLVPRSLDGVAPPRCKFG*SGLFSF
Trigger: GAAGGAAAACAGGCCACTCAACCCAAACTTACACCT...GGGAGGCGCCACCCCATCCAGAGACCTAGGAACTAGAAGACTGCCACTGCCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000270357.10
CDS TCA 90 bp AGAGCTGGGACAGGTAGTACACGAAGCAGTAGCCCTTCTCGTAGGTaGACAGGTTCATCAGGTGGCTGGGATTCACTCCTGGCTCCAGCT +
Preference number: 5 (lower is better)
Translates to: RAGTGSTRSSSPSRR*TGSSGGWDSLLAPA
Trigger: AGCTGGAGCCAGGAGTGAATCCCAGCCACCTGATGAACCTGTTCACCTACGAGAAGGGCTACTGCTTCGTGTACTACCTGTCCCAGCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000270357.10
ENST00000486058.5
ENST00000493398.5
CDS-3UTR CAA 90 bp GTGACTGGGGACTGGACAGTGATGGTATCAGGGTTATTTGCCCAGCACCTCCTGTGGAAGGTCCTCCACTaGGAGATGTCAATGGCGCTG +
Preference number: 5 (lower is better)
Translates to: VTGDWTVMVSGLFAQHLLWKVLH*EMSMAL
Trigger: CAGCGCCATTGACATCTCCAAGTGGAGGACCTTCCA...CAGGAGGTGCTGGGCAAATAACCCTGATACCATCACTGTCCAGTCCCCAGTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270357.10
CDS TCA 90 bp AGAAGCTCAGGAAGGAGTCCAGCAGGTCCTGGGCCACCACGCTGGTaGACTTGTACTTCTCCACATAGGCTCGGAGAAAGTCATCAAAGC +
Preference number: 5 (lower is better)
Translates to: RSSGRSPAGPGPPRW*TCTSPHRLGESHQS
Trigger: GCTTTGATGACTTTCTCCGAGCCTATGTGGAGAAGTACAAGTTCACCAGCGTGGTGGCCCAGGACCTGCTGGACTCCTTCCTGAGCTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000270357.10
ENST00000460884.1
ENST00000464550.5
ENST00000486058.5
ENST00000498042.1
CDS CCA 90 bp CTTGTACTTCTCCACATAGGCTCGGAGAAAGTCATCAAAGCGCTGTaGGTCTCCGCAGAGCTGGGACAGGTAGTACACGAAGCAGTAGCC +
Preference number: 5 (lower is better)
Translates to: LVLLHIGSEKVIKAL*VSAELGQVVHEAVA
Trigger: GGCTACTGCTTCGTGTACTACCTGTCCCAGCTCTGCGGAGACCCACAGCGCTTTGATGACTTTCTCCGAGCCTATGTGGAGAAGTACAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000270357.10
ENST00000460884.1
ENST00000464550.5
ENST00000486058.5
ENST00000498042.1
CDS-3UTR CAA 90 bp AGGTGCCCTCCATACCCGCTTTCACAGGGGTTACTGCAGTCATCCTATCCCTGGCAGCATGAGAAAGCTTaGTTGTGTGAGACGTCTGCG +
Preference number: 5 (lower is better)
Translates to: RCPPYPLSQGLLQSSYPWQHEKA*LCETSA
Trigger: CGCAGACGTCTCACACAACAAAGCTTTCTCATGCTG...CCAGGGATAGGATGACTGCAGTAACCCCTGTGAAAGCGGGTATGGAGGGCACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270357.10
CDS-3UTR CAA 90 bp GTGTTGAGACAGGAGGCATGGTGTGTGCGGGCTGGCCCCAGGGCCTGCAGTGCAATAAACTACCTGTTCTaGTTTCATAAGTGCCTCTTC +
Preference number: 5 (lower is better)
Translates to: VLRQEAWCVRAGPRACSAINYLF*FHKCLF
Trigger: GAAGAGGCACTTATGAAACAAGAACAGGTAGTTTAT...TGCACTGCAGGCCCTGGGGCCAGCCCGCACACACCATGCCTCCTGTCTCAACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270357.10
CDS TCA 90 bp AGAGCTGGGACAGGTAGTACACGAAGCAGTAGCCCTTCTCGTAGGTaGACAGGTTCATCAGGTGGCTGGGATTCACTCCTGCAAGGTGAA +
Preference number: 5 (lower is better)
Translates to: RAGTGSTRSSSPSRR*TGSSGGWDSLLQGE
Trigger: TTCACCTTGCAGGAGTGAATCCCAGCCACCTGATGAACCTGTTCACCTACGAGAAGGGCTACTGCTTCGTGTACTACCTGTCCCAGCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000460884.1
ENST00000481757.5
CDS-3UTR CAA 90 bp CCTGAGGGACTTAGAAAACCTTATTTGGACCTCCAGGGCCTAGAAATTTGCATGAGCTTGACCTGCAGTTaGCTGACCGGGCTGTCCTCT +
Preference number: 5 (lower is better)
Translates to: PEGLRKPYLDLQGLEICMSLTCS*LTGLSS
Trigger: AGAGGACAGCCCGGTCAGCAAACTGCAGGTCAAGCT...CATGCAAATTTCTAGGCCCTGGAGGTCCAAATAAGGTTTTCTAAGTCCCTCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270357.10
CDS-3UTR CAA 90 bp CCTGAGGGACTTAGAAAACCTTATTTGGACCTCCAGGGCCTAGAAATTTGCATGTGGTATCAGGGTTATTaGCCCAGCACCTCCTGCCCT +
Preference number: 5 (lower is better)
Translates to: PEGLRKPYLDLQGLEICMWYQGY*PSTSCP
Trigger: AGGGCAGGAGGTGCTGGGCAAATAACCCTGATACCA...CATGCAAATTTCTAGGCCCTGGAGGTCCAAATAAGGTTTTCTAAGTCCCTCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270357.10
CDS-3UTR CAA 90 bp CCCAGGATGAAAGTCTGTGACTGCTGGGACTTGAAAACAACCTTGGCGGGGAAGCTTAGAAAACCTTATTaGGACCTCCAGGGCCTAGAA +
Preference number: 5 (lower is better)
Translates to: PRMKVCDCWDLKTTLAGKLRKPY*DLQGLE
Trigger: TTCTAGGCCCTGGAGGTCCAAATAAGGTTTTCTAAG...CTTCCCCGCCAAGGTTGTTTTCAAGTCCCAGCAGTCACAGACTTTCATCCTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000270357.10
CDS TCA 90 bp CTGCTCTTAAAGGGCAGTGCCCATTCCCTACCCACAAAAAGCTCTTaGTGCACTTGCTGTACCTTCCAAAACTTGGTGTCACCATGCACA +
Preference number: 5 (lower is better)
Translates to: LLLKGSAHSLPTKSS*CTCCTFQNLVSPCT
Trigger: TGTGCATGGTGACACCAAGTTTTGGAAGGTACAGCAAGTGCATCAAGAGCTTTTTGTGGGTAGGGAATGGGCACTGCCCTTTAAGAGCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000481757.5
CDS-3UTR CAA 90 bp CCTGAGGGACTTAGAAAACCTTATTTGGACCTCCAGGGCCTAGAAATTTGCATGGGTGCCTGGAAACATTaGAGATCTCTGTTCATCGGT +
Preference number: 5 (lower is better)
Translates to: PEGLRKPYLDLQGLEICMGAWKH*RSLFIG
Trigger: ACCGATGAACAGAGATCTCAAATGTTTCCAGGCACC...CATGCAAATTTCTAGGCCCTGGAGGTCCAAATAAGGTTTTCTAAGTCCCTCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270357.10
CDS TCA 72 bp CAGCAGCACTGCGCGGCCATGGCCGCCGGCACTAGGTaGAATCCATGGGCGGCGGCCGCGCCGGGCCGCGGG +
Preference number: 6 (lower is better)
Translates to: QQHCAAMAAGTR*NPWAAAAPGRG
Trigger: CCCGCGGCCCGGCGCGGCCGCCGCCCATGGATTTCACCTAGTGCCGGCGGCCATGGCCGCGCAGTGCTGCTG
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270357.10
CDS CCA 72 bp CGCCGGGCGCCTGGCGGCAGCAGCACTGCGCGGCCATaGCCGCCGGCACTAGGTGAAATCCATGGGCGGCGG +
Preference number: 6 (lower is better)
Translates to: RRAPGGSSTARP*PPALGEIHGRR
Trigger: CCGCCGCCCATGGATTTCACCTAGTGCCGGCGGCCATGGCCGCGCAGTGCTGCTGCCGCCAGGCGCCCGGCG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270357.10
CDS GCA 72 bp AACTCGCGCGCCTCGGGCCGCAGCTCCAGGCCCAGCTaGAGGTGGCGGAGGCGGAAGAGCTGCGCGCTGGAG +
Preference number: 6 (lower is better)
Translates to: NSRASGRSSRPS*RWRRRKSCALE
Trigger: CTCCAGCGCGCAGCTCTTCCGCCTCCGCCACCTGCAGCTGGGCCTGGAGCTGCGGCCCGAGGCGCGCGAGTT
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270357.10
CDS TCA 72 bp CCCACACGCGGCTCCTGGGCCCGATGTCTGCCGGCTTaGGGTCTCCGGCCACCAGGGCCACGAGGTAGGCGG +
Preference number: 6 (lower is better)
Translates to: PTRGSWARCLPA*GLRPPGPRGRR
Trigger: CCGCCTACCTCGTGGCCCTGGTGGCCGGAGACCTCAAGCCGGCAGACATCGGGCCCAGGAGCCGCGTGTGGG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270357.10
ENST00000486058.5
CDS TCA 72 bp CCTCCCCGGCCCTGGCCGCACCGTAGGTCTCGGTGGTaGTACGGCGCTGGGCATAGGTGGCCAGGCCCTCGC +
Preference number: 6 (lower is better)
Translates to: PPRPWPHRRSRW*YGAGHRWPGPR
Trigger: GCGAGGGCCTGGCCACCTATGCCCAGCGCCGTATCACCACCGAGACCTACGGTGCGGCCAGGGCCGGGGAGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000481757.5
ENST00000486058.5
CDS TCA 72 bp AAAAGGGCCTCCACGGGCCGGGTCAGGCTGGATCCCTaGGACAGGTCCGGCTCAGCCAGCGGCGGGCCTGTG +
Preference number: 6 (lower is better)
Translates to: KRASTGRVRLDP*DRSGSASGGPV
Trigger: CACAGGCCCGCCGCTGGCTGAGCCGGACCTGTCTCAGGGATCCAGCCTGACCCGGCCCGTGGAGGCCCTTTT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000270357.10
ENST00000451363.5
ENST00000464550.5
ENST00000471657.1
ENST00000481757.5
ENST00000486058.5
ENST00000493398.5
CDS GCA 72 bp CTGCACTCAGCCACTGCTCCACTGCGCCCGACAGCTTaGTGGTGGCCGTGGGCAGGAGGCATGGCTCGGCCC +
Preference number: 6 (lower is better)
Translates to: LHSATAPLRPTA*WWPWAGGMARP
Trigger: GGGCCGAGCCATGCCTCCTGCCCACGGCCACCAGCAAGCTGTCGGGCGCAGTGGAGCAGTGGCTGAGTGCAG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270357.10
ENST00000486058.5
CDS GCA 72 bp GGCGCTGGCCGAGGCAGCTGCCTGGTCCAGAGGTTCTaGGGTCCACAGCTGGAAAAGGGCCTCCACGGGCCG +
Preference number: 6 (lower is better)
Translates to: GAGRGSCLVQRF*GPQLEKGLHGP
Trigger: CGGCCCGTGGAGGCCCTTTTCCAGCTGTGGACCGCAGAACCTCTGGACCAGGCAGCTGCCTCGGCCAGCGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000270357.10
ENST00000437406.1
ENST00000451363.5
ENST00000464550.5
ENST00000471657.1
ENST00000481757.5
ENST00000486058.5
ENST00000493398.5
CDS GCA 72 bp TGGAAGGGTGGGGCACAGGCAGCCCCACCAGAGGCCTaGAGGGCACTGCAGGGCGTGCGCCAAGGTACGTGC +
Preference number: 6 (lower is better)
Translates to: WKGGAQAAPPEA*RALQGVRQGTC
Trigger: GCACGTACCTTGGCGCACGCCCTGCAGTGCCCTGCAGGCCTCTGGTGGGGCTGCCTGTGCCCCACCCTTCCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000471657.1
ENST00000481757.5
ENST00000493398.5
CDS GCA 72 bp AGGCCCCGCCTGCCATCATACCCACGGCTCCCTGGCTaGAGGGTTGGGGGTCAGCCTCACCTGCCCGGCAGT +
Preference number: 6 (lower is better)
Translates to: RPRLPSYPRLPG*RVGGQPHLPGS
Trigger: ACTGCCGGGCAGGTGAGGCTGACCCCCAACCCTGCAGCCAGGGAGCCGTGGGTATGATGGCAGGCGGGGCCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000481757.5
ENST00000498042.1
CDS CCA 72 bp TCAGCCACTGCTCCACTGCGCCCGACAGCTTGCTGGTaGCCGTGGGCAGGAGGCATGGCTCGGCCCACACGC +
Preference number: 6 (lower is better)
Translates to: SATAPLRPTACW*PWAGGMARPTR
Trigger: GCGTGTGGGCCGAGCCATGCCTCCTGCCCACGGCCACCAGCAAGCTGTCGGGCGCAGTGGAGCAGTGGCTGA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270357.10
ENST00000486058.5
CDS CAA 72 bp GACAGGTCCGGCTCAGCCAGCGGCGGGCCTGTGGCATaGAGCCAGCGCTCGAATTCCAGCCCTGCCCGGCAG +
Preference number: 6 (lower is better)
Translates to: DRSGSASGGPVA*SQRSNSSPARQ
Trigger: CTGCCGGGCAGGGCTGGAATTCGAGCGCTGGCTCAATGCCACAGGCCCGCCGCTGGCTGAGCCGGACCTGTC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000270357.10
ENST00000451363.5
ENST00000464550.5
ENST00000471657.1
ENST00000486058.5
ENST00000493398.5
CDS TCA 72 bp ACAGGTCCGGCTCAGCCAGCGGCGGGCCTGTGGCATTaGGCCAGCGCTCGAATTCCAGCCCTGCCCGGCAGT +
Preference number: 6 (lower is better)
Translates to: TGPAQPAAGLWH*ASARIPALPGS
Trigger: ACTGCCGGGCAGGGCTGGAATTCGAGCGCTGGCTCAATGCCACAGGCCCGCCGCTGGCTGAGCCGGACCTGT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000270357.10
ENST00000451363.5
ENST00000464550.5
ENST00000471657.1
ENST00000486058.5
ENST00000493398.5
CDS GCA 72 bp GTGTACCGCAGGATGACCTGGAAGGGCTGGTGCGCCTaGAGCTCGGGCGGCAGCGTGACGGTGAGCGAGGAG +
Preference number: 6 (lower is better)
Translates to: VYRRMTWKGWCA*SSGGSVTVSEE
Trigger: CTCCTCGCTCACCGTCACGCTGCCGCCCGAGCTGCAGGCGCACCAGCCCTTCCAGGTCATCCTGCGGTACAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270357.10
ENST00000486058.5
CDS GCA 72 bp GTCGAGGTGTACCGCAGGATGACCTGGAAGGGCTGGTaGGCCTGCAGCTCGGGCGGCAGCGTGACGGTGAGC +
Preference number: 6 (lower is better)
Translates to: VEVYRRMTWKGW*ACSSGGSVTVS
Trigger: GCTCACCGTCACGCTGCCGCCCGAGCTGCAGGCGCACCAGCCCTTCCAGGTCATCCTGCGGTACACCTCGAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270357.10
ENST00000486058.5
CDS CCA 72 bp TCGGTCGAGGTGTACCGCAGGATGACCTGGAAGGGCTaGTGCGCCTGCAGCTCGGGCGGCAGCGTGACGGTG +
Preference number: 6 (lower is better)
Translates to: SVEVYRRMTWKG*CACSSGGSVTV
Trigger: CACCGTCACGCTGCCGCCCGAGCTGCAGGCGCACCAGCCCTTCCAGGTCATCCTGCGGTACACCTCGACCGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270357.10
ENST00000486058.5
CDS CCA 72 bp TGCAGGGCACTGCAGGGCGTGCGCCAAGGTACGTGCTaGGCACAGGGGCAGCTAGTGGGCACTGCGGAGCCA +
Preference number: 6 (lower is better)
Translates to: CRALQGVRQGTC*AQGQLVGTAEP
Trigger: TGGCTCCGCAGTGCCCACTAGCTGCCCCTGTGCCCAGCACGTACCTTGGCGCACGCCCTGCAGTGCCCTGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000471657.1
ENST00000481757.5
ENST00000493398.5
CDS GCA 72 bp GGGCCTGTGCGTCCGAGTCTGTGTCTGCTTCAGCCTTaGCCAGCTCCGTGCTGGGCTCTGAGGCGGGCTCTG +
Preference number: 6 (lower is better)
Translates to: GPVRPSLCLLQP*PAPCWALRRAL
Trigger: CAGAGCCCGCCTCAGAGCCCAGCACGGAGCTGGGCAAGGCTGAAGCAGACACAGACTCGGACGCACAGGCCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000270357.10
ENST00000437406.1
ENST00000481757.5
ENST00000486058.5
CDS GCA 72 bp TCAGCCAGCGGCGGGCCTGCCCGGCAGTCCACGCTCTaGTCCTTCAGCTCCGGGAAGAAGCTCAGGAAGGAG +
Preference number: 6 (lower is better)
Translates to: SASGGPARQSTL*SFSSGKKLRKE
Trigger: CTCCTTCCTGAGCTTCTTCCCGGAGCTGAAGGAGCAGAGCGTGGACTGCCGGGCAGGCCCGCCGCTGGCTGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437406.1
CDS CAA 72 bp GACAGGTCCGGCTCAGCCAGCGGCGGGCCTGTGGCATaGAGCCAGCGCTCGAATTCCAGCCCTAGAGGGGAG +
Preference number: 6 (lower is better)
Translates to: DRSGSASGGPVA*SQRSNSSPRGE
Trigger: CTCCCCTCTAGGGCTGGAATTCGAGCGCTGGCTCAATGCCACAGGCCCGCCGCTGGCTGAGCCGGACCTGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481757.5
CDS TCA 72 bp GCCCTGGGCGTGCAGCGGCAGGGCCTCGGGGAAGACTaGGGACTCACACACCACTGTGACTGCTGCTCAGAG +
Preference number: 6 (lower is better)
Translates to: ALGVQRQGLGED*GLTHHCDCCSE
Trigger: CTCTGAGCAGCAGTCACAGTGGTGTGTGAGTCCTCAGTCTTCCCCGAGGCCCTGCCGCTGCACGCCCAGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460884.1
ENST00000481757.5
CDS TCA 72 bp ACAGGTCCGGCTCAGCCAGCGGCGGGCCTGTGGCATTaGGCCAGCGCTCGAATTCCAGCCCTAGAGGGGAGA +
Preference number: 6 (lower is better)
Translates to: TGPAQPAAGLWH*ASARIPALEGR
Trigger: TCTCCCCTCTAGGGCTGGAATTCGAGCGCTGGCTCAATGCCACAGGCCCGCCGCTGGCTGAGCCGGACCTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481757.5
CDS GCA 72 bp ATACAGCCGCTCAGCTGCACTCAGCCACTGCTCCACTaGGCCCGACAGCTTGCTGGTGGCCGTGGGCAGGAG +
Preference number: 6 (lower is better)
Translates to: IQPLSCTQPLLH*ARQLAGGRGQE
Trigger: CTCCTGCCCACGGCCACCAGCAAGCTGTCGGGCGCAGTGGAGCAGTGGCTGAGTGCAGCTGAGCGGCTGTAT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270357.10
ENST00000486058.5
CDS GCA 72 bp ACCGGGCTGTCCTCTCCCAGAAGCTTCATCTGCCGGTaGAGGGCGTCCAGGCGGAAGGCAGTCTCCAGGCAG +
Preference number: 6 (lower is better)
Translates to: TGLSSPRSFICR*RASRRKAVSRQ
Trigger: CTGCCTGGAGACTGCCTTCCGCCTGGACGCCCTGCACCGGCAGATGAAGCTTCTGGGAGAGGACAGCCCGGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000270357.10
ENST00000451363.5
ENST00000481757.5
ENST00000486058.5
CDS CCA 72 bp GCAGCTGCCTGGTCCAGAGGTTCTGCGGTCCACAGCTaGAAAAGGGCCTCCACGGGCCGGGTCAGGCTGGAT +
Preference number: 6 (lower is better)
Translates to: AAAWSRGSAVHS*KRASTGRVRLD
Trigger: ATCCAGCCTGACCCGGCCCGTGGAGGCCCTTTTCCAGCTGTGGACCGCAGAACCTCTGGACCAGGCAGCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000270357.10
ENST00000437406.1
ENST00000451363.5
ENST00000464550.5
ENST00000471657.1
ENST00000481757.5
ENST00000486058.5
ENST00000493398.5
CDS CAA 72 bp ACACCCCCGTCACCCGCCCTTCCTGCACCAGGCCCTTaGCACACCTGGTTTCCATGGCCCGCTTCCTGGGAG +
Preference number: 6 (lower is better)
Translates to: TPPSPALPAPGP*HTWFPWPASWE
Trigger: CTCCCAGGAAGCGGGCCATGGAAACCAGGTGTGCAAAGGGCCTGGTGCAGGAAGGGCGGGTGACGGGGGTGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000481757.5
CDS CAA 90 bp AGCTCCAGGACACCCCCGTCACCCGCCCTTCCTGCACCAGGCCCTTaGCACACCTGGTTTCCATGGCCCGCTTCCTGGGAGTGCCTGACT +
Preference number: 6 (lower is better)
Translates to: SSRTPPSPALPAPGP*HTWFPWPASWECLT
Trigger: AGTCAGGCACTCCCAGGAAGCGGGCCATGGAAACCAGGTGTGCAAAGGGCCTGGTGCAGGAAGGGCGGGTGACGGGGGTGTCCTGGAGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000481757.5
CDS TCA 72 bp CAAGCGCCACTGTCCCTCACATGTCCAGATGTGTACTaGTGCCCTGGGCGTGCAGCGGCAGGGCCTCGGGGA +
Preference number: 6 (lower is better)
Translates to: QAPLSLTCPDVY*CPGRAAAGPRG
Trigger: TCCCCGAGGCCCTGCCGCTGCACGCCCAGGGCATCAGTACACATCTGGACATGTGAGGGACAGTGGCGCTTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460884.1
ENST00000481757.5
CDS GCA 72 bp CCTGCCCCACATGTAGGGCCCATACAGCCGCTCAGCTaGACTCAGCCACTGCTCCACTGCGCCCGACAGCTT +
Preference number: 6 (lower is better)
Translates to: PAPHVGPIQPLS*TQPLLHCARQL
Trigger: AAGCTGTCGGGCGCAGTGGAGCAGTGGCTGAGTGCAGCTGAGCGGCTGTATGGGCCCTACATGTGGGGCAGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270357.10
ENST00000486058.5
CDS GCA 72 bp TTGCTGACCGGGCTGTCCTCTCCCAGAAGCTTCATCTaGCGGTGCAGGGCGTCCAGGCGGAAGGCAGTCTCC +
Preference number: 6 (lower is better)
Translates to: LLTGLSSPRSFI*RCRASRRKAVS
Trigger: GGAGACTGCCTTCCGCCTGGACGCCCTGCACCGGCAGATGAAGCTTCTGGGAGAGGACAGCCCGGTCAGCAA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000270357.10
ENST00000451363.5
ENST00000481757.5
ENST00000486058.5
CDS GCA 72 bp TGGGGGTCAGCCTCACCTGCCCGGCAGTCCACGCTCTaGTCCTTCAGCTCCGGGAAGAAGCTCAGGAAGGAG +
Preference number: 6 (lower is better)
Translates to: WGSASPARQSTL*SFSSGKKLRKE
Trigger: CTCCTTCCTGAGCTTCTTCCCGGAGCTGAAGGAGCAGAGCGTGGACTGCCGGGCAGGTGAGGCTGACCCCCA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000481757.5
ENST00000498042.1
CDS TCA 72 bp CCTGCGTCTGGTAGAAGACCTCCAGCGCGAAGGACTTaGGGGCACCGGTGCAGAGGTCCTCGTACAGCGGGA +
Preference number: 6 (lower is better)
Translates to: PASGRRPPARRT*GHRCRGPRTAG
Trigger: TCCCGCTGTACGAGGACCTCTGCACCGGTGCCCTCAAGTCCTTCGCGCTGGAGGTCTTCTACCAGACGCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270357.10
ENST00000437406.1
ENST00000464550.5
ENST00000481757.5
ENST00000486058.5
CDS TCA 72 bp GAACACACGAAGGGCAGGCAAGGAGGCCTTGAGGGGTaGCATCCCCAGTTGTGGGAGCGGGTCCTGAGGAGC +
Preference number: 6 (lower is better)
Translates to: EHTKGRQGGLEG*HPQLWERVLRS
Trigger: GCTCCTCAGGACCCGCTCCCACAACTGGGGATGTCACCCCTCAAGGCCTCCTTGCCTGCCCTTCGTGTGTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481757.5
CDS GCA 72 bp CGCTCGAATTCCAGCCCTGCCCGGCAGTCCACGCTCTaGTCCTTCAGCTCCGGGAAGAAGCTCAGGAAGGAG +
Preference number: 6 (lower is better)
Translates to: RSNSSPARQSTL*SFSSGKKLRKE
Trigger: CTCCTTCCTGAGCTTCTTCCCGGAGCTGAAGGAGCAGAGCGTGGACTGCCGGGCAGGGCTGGAATTCGAGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000270357.10
ENST00000451363.5
ENST00000464550.5
ENST00000471657.1
ENST00000486058.5
ENST00000493398.5
CDS CCA 72 bp CAGCGTTCATCGAGTCCAGCAGGGAGGAGTAGCACTTaGACAGGCTCATCACCACCTCCTGCGGCAGCGGGG +
Preference number: 6 (lower is better)
Translates to: QRSSSPAGRSST*TGSSPPPAAAG
Trigger: CCCCGCTGCCGCAGGAGGTGGTGATGAGCCTGTCCAAGTGCTACTCCTCCCTGCTGGACTCGATGAACGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000270357.10
ENST00000437406.1
ENST00000464550.5
ENST00000471657.1
ENST00000481757.5
ENST00000486058.5
CDS CCA 72 bp GAGTGTGTTCCAGGCAGGTGGCCTGTTCCAGGGACGTaGGCTGTTCAGGAAGGCGGAGTCAGCTCCAGCCAG +
Preference number: 6 (lower is better)
Translates to: ECVPGRWPVPGT*AVQEGGVSSSQ
Trigger: CTGGCTGGAGCTGACTCCGCCTTCCTGAACAGCCCACGTCCCTGGAACAGGCCACCTGCCTGGAACACACTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481757.5
CDS CCA 72 bp CAGGAGACCCCAGACCCTGAGTGTGTTCCAGGCAGGTaGCCTGTTCCAGGGACGTGGGCTGTTCAGGAAGGC +
Preference number: 6 (lower is better)
Translates to: QETPDPECVPGR*PVPGTWAVQEG
Trigger: GCCTTCCTGAACAGCCCACGTCCCTGGAACAGGCCACCTGCCTGGAACACACTCAGGGTCTGGGGTCTCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481757.5
CDS CCA 72 bp CAGCGTTCATCGAGTCCAGCAGGGAGGAGTAGCACTTaGACAGGCTCATCACCACCCTGCGGCAGCGGGGAC +
Preference number: 6 (lower is better)
Translates to: QRSSSPAGRSST*TGSSPPCGSGD
Trigger: GTCCCCGCTGCCGCAGGGTGGTGATGAGCCTGTCCAAGTGCTACTCCTCCCTGCTGGACTCGATGAACGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493398.5
CDS CAA 90 bp TCCAGGAGCCGGTCCAGGAAGAGTGCTGTCTGGAAGGTCCTCCACTaGGAGATGTCAATGGCGCTGGCCGAGGCAGCTGCCTGGTCCAGA +
Preference number: 6 (lower is better)
Translates to: SRSRSRKSAVWKVLH*EMSMALAEAAAWSR
Trigger: TCTGGACCAGGCAGCTGCCTCGGCCAGCGCCATTGACATCTCCAAGTGGAGGACCTTCCAGACAGCACTCTTCCTGGACCGGCTCCTGGA
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000270357.10
ENST00000437406.1
ENST00000464550.5
ENST00000471657.1
ENST00000481757.5
ENST00000486058.5
ENST00000493398.5
CDS CAA 90 bp CCAGTTGTGGGAGCGGGTCCTGAGGAGCAGGTACCTGGCTCCAGCTaGACCTGCAGTTTGCTGACCGGGCTGTCCTCTCCCAGAAGCTTC +
Preference number: 6 (lower is better)
Translates to: PVVGAGPEEQVPGSS*TCSLLTGLSSPRSF
Trigger: GAAGCTTCTGGGAGAGGACAGCCCGGTCAGCAAACTGCAGGTCAAGCTGGAGCCAGGTACCTGCTCCTCAGGACCCGCTCCCACAACTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481757.5
CDS TCA 72 bp TTGAGGGGTGACATCCCCAGTTGTGGGAGCGGGTCCTaGGGAGCAGGTACCTGGCTCCAGCTTGACCTGCAG +
Preference number: 6 (lower is better)
Translates to: LRGDIPSCGSGS*GAGTWLQLDLQ
Trigger: CTGCAGGTCAAGCTGGAGCCAGGTACCTGCTCCTCAGGACCCGCTCCCACAACTGGGGATGTCACCCCTCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481757.5
CDS TCA 72 bp CCACCCTCCAGCAATTCTGGCCTCTCCCTCAATGTCTaGACCCTGCAGTGCCTTCCTGGGCCCCAAGCCCTC +
Preference number: 6 (lower is better)
Translates to: PPSSNSGLSLNV*TLQCLPGPQAL
Trigger: GAGGGCTTGGGGCCCAGGAAGGCACTGCAGGGTTCAGACATTGAGGGAGAGGCCAGAATTGCTGGAGGGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481757.5
CDS GCA 72 bp CCACTTGGAGATGTCAATGGCGCTGGCCGAGGCAGCTaGCTGGTCCAGAGGTTCTGCGGTCCACAGCTGGAA +
Preference number: 6 (lower is better)
Translates to: PLGDVNGAGRGS*LVQRFCGPQLE
Trigger: TTCCAGCTGTGGACCGCAGAACCTCTGGACCAGGCAGCTGCCTCGGCCAGCGCCATTGACATCTCCAAGTGG
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000270357.10
ENST00000437406.1
ENST00000451363.5
ENST00000464550.5
ENST00000471657.1
ENST00000481757.5
ENST00000486058.5
ENST00000493398.5
CDS GCA 72 bp CCTCACATGTCCAGATGTGTACTGATGCCCTGGGCGTaGAGCGGCAGGGCCTCGGGGAAGACTGAGGACTCA +
Preference number: 6 (lower is better)
Translates to: PHMSRCVLMPWA*SGRASGKTEDS
Trigger: TGAGTCCTCAGTCTTCCCCGAGGCCCTGCCGCTGCACGCCCAGGGCATCAGTACACATCTGGACATGTGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460884.1
ENST00000481757.5
CDS GCA 72 bp GGTCCTGAGGAGCAGGTACCTGGCTCCAGCTTGACCTaGAGTTTGCTGACCGGGCTGTCCTCTCCCAGAAGC +
Preference number: 6 (lower is better)
Translates to: GPEEQVPGSSLT*SLLTGLSSPRS
Trigger: GCTTCTGGGAGAGGACAGCCCGGTCAGCAAACTGCAGGTCAAGCTGGAGCCAGGTACCTGCTCCTCAGGACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481757.5
CDS CCA 72 bp GGAAGACGCCTTCTTCCTCCATGTATGCACTCCGGGTaGCACTCATCAGCACCTGCACCCCCGATGGCGCCT +
Preference number: 6 (lower is better)
Translates to: GRRLLPPCMHSG*HSSAPAPPMAP
Trigger: AGGCGCCATCGGGGGTGCAGGTGCTGATGAGTGCCACCCGGAGTGCATACATGGAGGAAGAAGGCGTCTTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000270357.10
ENST00000486058.5
CDS CCA 72 bp ACTGTCCCTCACATGTCCAGATGTGTACTGATGCCCTaGGCGTGCAGCGGCAGGGCCTCGGGGAAGACTGAG +
Preference number: 6 (lower is better)
Translates to: TVPHMSRCVLMP*ACSGRASGKTE
Trigger: CTCAGTCTTCCCCGAGGCCCTGCCGCTGCACGCCCAGGGCATCAGTACACATCTGGACATGTGAGGGACAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460884.1
ENST00000481757.5
CDS CAA 72 bp CGGTCCAGGAAGAGTGCTGTCTGGAAGGTCCTCCACTaGGAGATGTCAATGGCGCTGGCCGAGGCAGCTGCC +
Preference number: 6 (lower is better)
Translates to: RSRKSAVWKVLH*EMSMALAEAAA
Trigger: GGCAGCTGCCTCGGCCAGCGCCATTGACATCTCCAAGTGGAGGACCTTCCAGACAGCACTCTTCCTGGACCG
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000270357.10
ENST00000437406.1
ENST00000464550.5
ENST00000471657.1
ENST00000481757.5
ENST00000486058.5
ENST00000493398.5
CDS GCA 72 bp AGGTGGCTGGGATTCACTCCTGGCTCCAGCTTGACCTaGAGTTTGCTGACCGGGCTGTCCTCTCCCAGAAGC +
Preference number: 6 (lower is better)
Translates to: RWLGFTPGSSLT*SLLTGLSSPRS
Trigger: GCTTCTGGGAGAGGACAGCCCGGTCAGCAAACTGCAGGTCAAGCTGGAGCCAGGAGTGAATCCCAGCCACCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000270357.10
ENST00000486058.5
ENST00000493398.5
CDS CCA 72 bp TTGGAGATGTCAATGGCGCTGGCCGAGGCAGCTGCCTaGTCCAGAGGTTCTGCGGTCCACAGCTGGAAAAGG +
Preference number: 6 (lower is better)
Translates to: LEMSMALAEAAA*SRGSAVHSWKR
Trigger: CCTTTTCCAGCTGTGGACCGCAGAACCTCTGGACCAGGCAGCTGCCTCGGCCAGCGCCATTGACATCTCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000270357.10
ENST00000437406.1
ENST00000451363.5
ENST00000464550.5
ENST00000471657.1
ENST00000481757.5
ENST00000486058.5
ENST00000493398.5
CDS CCA 72 bp GTGCTGTCTGGAAGGTCCTCCACTTGGAGATGTCAATaGCGCTGGCCGAGGCAGCTGCCTGGTCCAGAGGTT +
Preference number: 6 (lower is better)
Translates to: VLSGRSSTWRCQ*RWPRQLPGPEV
Trigger: AACCTCTGGACCAGGCAGCTGCCTCGGCCAGCGCCATTGACATCTCCAAGTGGAGGACCTTCCAGACAGCAC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000270357.10
ENST00000437406.1
ENST00000451363.5
ENST00000464550.5
ENST00000471657.1
ENST00000481757.5
ENST00000486058.5
ENST00000493398.5
CDS CCA 72 bp GGTCCAGGAAGAGTGCTGTCTGGAAGGTCCTCCACTTaGAGATGTCAATGGCGCTGGCCGAGGCAGCTGCCT +
Preference number: 6 (lower is better)
Translates to: GPGRVLSGRSST*RCQWRWPRQLP
Trigger: AGGCAGCTGCCTCGGCCAGCGCCATTGACATCTCCAAGTGGAGGACCTTCCAGACAGCACTCTTCCTGGACC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000270357.10
ENST00000437406.1
ENST00000464550.5
ENST00000471657.1
ENST00000481757.5
ENST00000486058.5
ENST00000493398.5
CDS CCA 72 bp GGGATTCACTCCTGCAAGGTGAACACCCACCTGGGCTaGCGTCCGAAACCACCAGTGTCCCGTGGAATAGGG +
Preference number: 6 (lower is better)
Translates to: GIHSCKVNTHLG*RPKPPVSRGIG
Trigger: CCCTATTCCACGGGACACTGGTGGTTTCGGACGCCAGCCCAGGTGGGTGTTCACCTTGCAGGAGTGAATCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000460884.1
ENST00000481757.5
CDS CCA 72 bp CCCTCCCAGTGGCACCTCACCACCCTCCAGCAATTCTaGCCTCTCCCTCAATGTCTGAACCCTGCAGTGCCT +
Preference number: 6 (lower is better)
Translates to: PSQWHLTTLQQF*PLPQCLNPAVP
Trigger: AGGCACTGCAGGGTTCAGACATTGAGGGAGAGGCCAGAATTGCTGGAGGGTGGTGAGGTGCCACTGGGAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481757.5
CDS CCA 72 bp GGAGGCCACCTGCGCCATGAACCAGCAGGGGCGGGATaGGGGCAACAGGCTCTTAAGATGATATTCCTGCTC +
Preference number: 6 (lower is better)
Translates to: GGHLRHEPAGAG*GQQALKMIFLL
Trigger: GAGCAGGAATATCATCTTAAGAGCCTGTTGCCCCCATCCCGCCCCTGCTGGTTCATGGCGCAGGTGGCCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481757.5
CDS TCA 72 bp GGAAGGAGTCCAGCAGGTCCTGGGCCACCACGCTGGTaGACTTGTACTTCTCCACATAGGCCTGTGTGGCAG +
Preference number: 6 (lower is better)
Translates to: GRSPAGPGPPRW*TCTSPHRPVWQ
Trigger: CTGCCACACAGGCCTATGTGGAGAAGTACAAGTTCACCAGCGTGGTGGCCCAGGACCTGCTGGACTCCTTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000471657.1
ENST00000481757.5
ENST00000493398.5
CDS TCA 72 bp GTCCAGCAAGGGTTGGCTGAAGGACAGACAGTGAACTaGCAGGGCTTTCCTCCAGGTGGAGTGGCCCCTCAG +
Preference number: 6 (lower is better)
Translates to: VQQGLAEGQTVN*QGFPPGGVAPQ
Trigger: CTGAGGGGCCACTCCACCTGGAGGAAAGCCCTGTCAGTTCACTGTCTGTCCTTCAGCCAACCCTTGCTGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000481757.5
ENST00000498042.1
CDS TCA 72 bp TGTGAAGGGGTACAGGGAAGCAGAGACTTGGGTTGGTaGCCAAGGGACTCGCACCCACTCCACGCCTCTCCT +
Preference number: 6 (lower is better)
Translates to: CEGVQGSRDLGW*PRDSHPLHASP
Trigger: AGGAGAGGCGTGGAGTGGGTGCGAGTCCCTTGGTCACCAACCCAAGTCTCTGCTTCCCTGTACCCCTTCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481757.5
CDS GCA 72 bp CAGCGGGGACCCATCCAGGAGCCGGTCCAGGAAGAGTaGTGTCTGGAAGGTCCTCCACTTGGAGATGTCAAT +
Preference number: 6 (lower is better)
Translates to: QRGPIQEPVQEE*CLEGPPLGDVN
Trigger: ATTGACATCTCCAAGTGGAGGACCTTCCAGACAGCACTCTTCCTGGACCGGCTCCTGGATGGGTCCCCGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000270357.10
ENST00000437406.1
ENST00000464550.5
ENST00000471657.1
ENST00000481757.5
ENST00000486058.5
ENST00000493398.5
CDS GCA 72 bp AGTAGTCGTTGCGGACCACAATCTGCAGCCAGCGGATaGGGATCTCAGCGTTCATCGAGTCCAGCAGGGAGG +
Preference number: 6 (lower is better)
Translates to: SSRCGPQSAASG*GSQRSSSPAGR
Trigger: CCTCCCTGCTGGACTCGATGAACGCTGAGATCCGCATCCGCTGGCTGCAGATTGTGGTCCGCAACGACTACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000270357.10
ENST00000437406.1
ENST00000464550.5
ENST00000471657.1
ENST00000481757.5
ENST00000486058.5
ENST00000493398.5
CDS TCA 72 bp GGAAGGAGTCCAGCAGGTCCTGGGCCACCACGCTGGTaGACTTGTACTTCTCCACATAGGCCTGCAGTTTGC +
Preference number: 6 (lower is better)
Translates to: GRSPAGPGPPRW*TCTSPHRPAVC
Trigger: GCAAACTGCAGGCCTATGTGGAGAAGTACAAGTTCACCAGCGTGGTGGCCCAGGACCTGCTGGACTCCTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451363.5
CDS TCA 72 bp ACATGGTCCAGCAAGGGTTGGCTGAAGGACAGACAGTaGACTGACAGGGCTTTCCTCCAGGTGGAGTGGCCC +
Preference number: 6 (lower is better)
Translates to: TWSSKGWLKDRQ*TDRAFLQVEWP
Trigger: GGGCCACTCCACCTGGAGGAAAGCCCTGTCAGTTCACTGTCTGTCCTTCAGCCAACCCTTGCTGGACCATGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000481757.5
ENST00000498042.1
CDS GCA 72 bp CATGTGGAAGTGGAAGACGCCTTCTTCCTCCATGTATaGACTCCGGGTGGCACTCATCAGCACCTGCACCCC +
Preference number: 6 (lower is better)
Translates to: HVEVEDAFFLHV*TPGGTHQHLHP
Trigger: GGGGTGCAGGTGCTGATGAGTGCCACCCGGAGTGCATACATGGAGGAAGAAGGCGTCTTCCACTTCCACATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270357.10
ENST00000486058.5
CDS GCA 72 bp GGTGAACAGGTTCATCAGGTGGCTGGGATTCACTCCTaGAAGGTGAACACCCACCTGGGCTGGCGTCCGAAA +
Preference number: 6 (lower is better)
Translates to: GEQVHQVAGIHS*KVNTHLGWRPK
Trigger: TTTCGGACGCCAGCCCAGGTGGGTGTTCACCTTGCAGGAGTGAATCCCAGCCACCTGATGAACCTGTTCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000460884.1
ENST00000481757.5
CDS CCA 72 bp GTGACAGCGTTGCCGAACCAACTGTGGGCCACCTCGTaGATGACATCGATGACCAGGAACTCATCGCTCTCC +
Preference number: 6 (lower is better)
Translates to: VTALPNQLWATS*MTSMTRNSSLS
Trigger: GGAGAGCGATGAGTTCCTGGTCATCGATGTCATCCACGAGGTGGCCCACAGTTGGTTCGGCAACGCTGTCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000270357.10
ENST00000481757.5
ENST00000486058.5
CDS CCA 72 bp TCCGGGAAGAAGCTCAGGAAGGAGTCCAGCAGGTCCTaGGCCACCACGCTGGTGAACTTGTACTTCTCCACA +
Preference number: 6 (lower is better)
Translates to: SGKKLRKESSRS*ATTLVNLYFST
Trigger: TGTGGAGAAGTACAAGTTCACCAGCGTGGTGGCCCAGGACCTGCTGGACTCCTTCCTGAGCTTCTTCCCGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000270357.10
ENST00000437406.1
ENST00000451363.5
ENST00000460884.1
ENST00000464550.5
ENST00000471657.1
ENST00000481757.5
ENST00000486058.5
ENST00000493398.5
ENST00000498042.1
CDS CCA 72 bp GGGGCTGCTCACTCGGAGAAAGTCATCAAAGCGCTGTaGGTCTCCGCAGAGCTGGGACAGGTAGTACACGAA +
Preference number: 6 (lower is better)
Translates to: GAAHSEKVIKAL*VSAELGQVVHE
Trigger: TTCGTGTACTACCTGTCCCAGCTCTGCGGAGACCCACAGCGCTTTGATGACTTTCTCCGAGTGAGCAGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000481757.5
ENST00000493398.5
CDS TCA 72 bp GGAAGGAGTCCAGCAGGTCCTGGGCCACCACGCTGGTaGACTTGTACTTCTCCACATAGGCTCGGAGAAAGT +
Preference number: 6 (lower is better)
Translates to: GRSPAGPGPPRW*TCTSPHRLGES
Trigger: ACTTTCTCCGAGCCTATGTGGAGAAGTACAAGTTCACCAGCGTGGTGGCCCAGGACCTGCTGGACTCCTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000270357.10
ENST00000460884.1
ENST00000464550.5
ENST00000486058.5
ENST00000498042.1
CDS TCA 72 bp CGCACCCACTCCACGCCTCTCCTGGGTGGAAGACAATaGAGTAGTCTAAACCCAACCTCAGTGCTGGTGGAG +
Preference number: 6 (lower is better)
Translates to: RTHSTPLLGGRQ*SSLNPTSVLVE
Trigger: CTCCACCAGCACTGAGGTTGGGTTTAGACTACTTCATTGTCTTCCACCCAGGAGAGGCGTGGAGTGGGTGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481757.5
CDS TCA 72 bp GCGGCTGCTTCCTTCCGGGTTGATGAAAAGGTTGCATaGGTCATGAGGAGCTTATCTAGAGAGGCCAGCGGC +
Preference number: 6 (lower is better)
Translates to: AAASFRVDEKVA*VMRSLSREASG
Trigger: GCCGCTGGCCTCTCTAGATAAGCTCCTCATGACTCATGCAACCTTTTCATCAACCCGGAAGGAAGCAGCCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451363.5
CDS CCA 72 bp CTCCACATAGGCTCGGAGAAAGTCATCAAAGCGCTGTaGGTCTCCGCAGAGCTGGGACAGGTAGTACACGAA +
Preference number: 6 (lower is better)
Translates to: LHIGSEKVIKAL*VSAELGQVVHE
Trigger: TTCGTGTACTACCTGTCCCAGCTCTGCGGAGACCCACAGCGCTTTGATGACTTTCTCCGAGCCTATGTGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000270357.10
ENST00000460884.1
ENST00000464550.5
ENST00000486058.5
ENST00000498042.1
CDS TCA 72 bp ACAGGTAGTACACGAAGCAGTAGCCCTTCTCGTAGGTaGACAGGTTCATCAGGTGGCTGGGATTCACTCCTG +
Preference number: 6 (lower is better)
Translates to: TGSTRSSSPSRR*TGSSGGWDSLL
Trigger: CAGGAGTGAATCCCAGCCACCTGATGAACCTGTTCACCTACGAGAAGGGCTACTGCTTCGTGTACTACCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000270357.10
ENST00000460884.1
ENST00000481757.5
ENST00000486058.5
ENST00000493398.5
CDS TCA 72 bp CTTCCTTCCGGGTTGATGAAAAGGTTGCATGAGTCATaGGGAGCTTATCTAGAGAGGCCAGCGGCAGGCAAG +
Preference number: 6 (lower is better)
Translates to: LPSGLMKRLHES*GAYLERPAAGK
Trigger: CTTGCCTGCCGCTGGCCTCTCTAGATAAGCTCCTCATGACTCATGCAACCTTTTCATCAACCCGGAAGGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451363.5
CDS CCA 72 bp AAAGCTCTTGATGCACTTGCTGTACCTTCCAAAACTTaGTGTCACCATGCACAGCCCTCCCAGTGGCACCTC +
Preference number: 6 (lower is better)
Translates to: KALDALAVPSKT*CHHAQPSQWHL
Trigger: GAGGTGCCACTGGGAGGGCTGTGCATGGTGACACCAAGTTTTGGAAGGTACAGCAAGTGCATCAAGAGCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481757.5
CDS CAA 90 bp AAAGGGCAGTGCCCATTCCCTACCCACAAAAAGCTCTTGATGCACTaGCTGTACCTTCCAAAACTTGGTGTCACCATGCACAGCCCTCCC +
Preference number: 6 (lower is better)
Translates to: KGQCPFPTHKKLLMH*LYLPKLGVTMHSPP
Trigger: GGGAGGGCTGTGCATGGTGACACCAAGTTTTGGAAGGTACAGCAAGTGCATCAAGAGCTTTTTGTGGGTAGGGAATGGGCACTGCCCTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000481757.5
CDS TCA 72 bp ACAGGTAGTACACGAAGCAGTAGCCCTTCTCGTAGGTaGACAGGTTCATCAGGTGGCTGGGATTCACTCACA +
Preference number: 6 (lower is better)
Translates to: TGSTRSSSPSRR*TGSSGGWDSLT
Trigger: TGTGAGTGAATCCCAGCCACCTGATGAACCTGTTCACCTACGAGAAGGGCTACTGCTTCGTGTACTACCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464550.5
CDS CAA 90 bp CCTGCTCTTAAAGGGCAGTGCCCATTCCCTACCCACAAAAAGCTCTaGATGCACTTGCTGTACCTTCCAAAACTTGGTGTCACCATGCAC +
Preference number: 6 (lower is better)
Translates to: PALKGQCPFPTHKKL*MHLLYLPKLGVTMH
Trigger: GTGCATGGTGACACCAAGTTTTGGAAGGTACAGCAAGTGCATCAAGAGCTTTTTGTGGGTAGGGAATGGGCACTGCCCTTTAAGAGCAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000481757.5
CDS TCA 72 bp AAGGGCAGTGCCCATTCCCTACCCACAAAAAGCTCTTaGTGCACTTGCTGTACCTTCCAAAACTTGGTGTCA +
Preference number: 6 (lower is better)
Translates to: KGSAHSLPTKSS*CTCCTFQNLVS
Trigger: TGACACCAAGTTTTGGAAGGTACAGCAAGTGCATCAAGAGCTTTTTGTGGGTAGGGAATGGGCACTGCCCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000481757.5
CDS CAA 72 bp TGCCCATTCCCTACCCACAAAAAGCTCTTGATGCACTaGCTGTACCTTCCAAAACTTGGTGTCACCATGCAC +
Preference number: 6 (lower is better)
Translates to: CPFPTHKKLLMH*LYLPKLGVTMH
Trigger: GTGCATGGTGACACCAAGTTTTGGAAGGTACAGCAAGTGCATCAAGAGCTTTTTGTGGGTAGGGAATGGGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000481757.5
CDS CAA 72 bp AAAGGGCAGTGCCCATTCCCTACCCACAAAAAGCTCTaGATGCACTTGCTGTACCTTCCAAAACTTGGTGTC +
Preference number: 6 (lower is better)
Translates to: KGQCPFPTHKKL*MHLLYLPKLGV
Trigger: GACACCAAGTTTTGGAAGGTACAGCAAGTGCATCAAGAGCTTTTTGTGGGTAGGGAATGGGCACTGCCCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000481757.5