RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RNFT2 (Homo sapiens)

Ensembl gene IDs: ENSG00000135119

Ensembl transcript IDs: ENST00000257575.9, ENST00000392549.7, ENST00000407967.7, ENST00000547718.5, ENST00000551251.1, ENST00000552920.1, ENST00000615278.1, ENST00000677328.1

Found 684 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GCCCTGGAACAGACGTCTTGCTGGGTACCAGGAGAGAGCCAGGGATaGCAAGCCAAGGGGAAAGTCCTGGTTTGGTGGCACACAGGGGCA +
Preference number: 1 (lower is better)
Translates to: ALEQTSCWVPGESQG*QAKGKVLVWWHTGA
Trigger: TGCCCCTGTGTGCCACCAAACCAGGACTTTCCCCTTGGCTTGGCATCCCTGGCTCTCTCCTGGTACCCAGCAAGACGTCTGTTCCAGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257575.9
ENST00000392549.7
3UTR GCA 90 bp ACTGTTTTCCACTTCCACACCATGGCTGCGGCTGTCCCCTCTTCCTaGCGTGCCCTTGTGGCTTTGCGATGCCTGGGTAACTCCCAGCCC +
Preference number: 1 (lower is better)
Translates to: TVFHFHTMAAAVPSS*RALVALRCLGNSQP
Trigger: GGGCTGGGAGTTACCCAGGCATCGCAAAGCCACAAGGGCACGGCAGGAAGAGGGGACAGCCGCAGCCATGGTGTGGAAGTGGAAAACAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677328.1
3UTR CCA 90 bp AAGCACAGTTTGGCCAGGAGGATCAGGATGAAGGGGAGTCCTTTCTaGAGCCAGCAGATCACAGCCTTCAGCTCGGACAGGGCGGGGGCG +
Preference number: 1 (lower is better)
Translates to: KHSLARRIRMKGSPF*SQQITAFSSDRAGA
Trigger: CGCCCCCGCCCTGTCCGAGCTGAAGGCTGTGATCTGCTGGCTCCAGAAAGGACTCCCCTTCATCCTGATCCTCCTGGCCAAACTGTGCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000547718.5
3UTR CCA 90 bp TCTGGCACAGGAGAATCAGAGGCTCTCGGAACTCGGCCTGACAGATaGCGCAGATGTCACCAGCTTCTGTGCACTGCTGCCCGGTGGCTC +
Preference number: 1 (lower is better)
Translates to: SGTGESEALGTRPDR*RRCHQLLCTAARWL
Trigger: GAGCCACCGGGCAGCAGTGCACAGAAGCTGGTGACATCTGCGCCATCTGTCAGGCCGAGTTCCGAGAGCCTCTGATTCTCCTGTGCCAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547718.5
3UTR TCA 90 bp GTACCAGGCCTCTGTTGGAAACTTGGCCCGCCCATGCTGGCTGGGTaGCCCTGGGAAAGTTACCGCACCAAGCTCTGTGCCCAAGTTTCC +
Preference number: 1 (lower is better)
Translates to: VPGLCWKLGPPMLAG*PWESYRTKLCAQVS
Trigger: GGAAACTTGGGCACAGAGCTTGGTGCGGTAACTTTCCCAGGGTCACCCAGCCAGCATGGGCGGGCCAAGTTTCCAACAGAGGCCTGGTAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257575.9
3UTR GCA 90 bp CTCGGAACTCGGCCTGACAGATGGCGCAGATGTCACCAGCTTCTGTaGACTGCTGCCCGGTGGCTCGGACTCCATAGTTCTGAGAGGTAC +
Preference number: 1 (lower is better)
Translates to: LGTRPDRWRRCHQLL*TAARWLGLHSSERY
Trigger: GTACCTCTCAGAACTATGGAGTCCGAGCCACCGGGCAGCAGTGCACAGAAGCTGGTGACATCTGCGCCATCTGTCAGGCCGAGTTCCGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547718.5
3UTR TCA 90 bp AACAGCATCTGGCACAGGAGAATCAGAGGCTCTCGGAACTCGGCCTaGCAGATGGCGCAGATGTCACCAGCTTCTGTGCACTGCTGCCCG +
Preference number: 1 (lower is better)
Translates to: NSIWHRRIRGSRNSA*QMAQMSPASVHCCP
Trigger: CGGGCAGCAGTGCACAGAAGCTGGTGACATCTGCGCCATCTGTCAGGCCGAGTTCCGAGAGCCTCTGATTCTCCTGTGCCAGATGCTGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547718.5
3UTR CCA 90 bp CCAGCACTGACCTCTTCTCCTTCAGTGAGACCTGTTCTCGAAGCGTaGAGTTGGCATAGGCGAAGGTGCTGGCCATCCCGATGCACACAG +
Preference number: 1 (lower is better)
Translates to: PALTSSPSVRPVLEA*SWHRRRCWPSRCTQ
Trigger: CTGTGTGCATCGGGATGGCCAGCACCTTCGCCTATGCCAACTCCACGCTTCGAGAACAGGTCTCACTGAAGGAGAAGAGGTCAGTGCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547718.5
3UTR CCA 90 bp GTGAGACCTGTTCTCGAAGCGTGGAGTTGGCATAGGCGAAGGTGCTaGCCATCCCGATGCACACAGCAATGCCGAGCTTATGCTGAAAGC +
Preference number: 1 (lower is better)
Translates to: VRPVLEAWSWHRRRC*PSRCTQQCRAYAES
Trigger: GCTTTCAGCATAAGCTCGGCATTGCTGTGTGCATCGGGATGGCCAGCACCTTCGCCTATGCCAACTCCACGCTTCGAGAACAGGTCTCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547718.5
3UTR CCA 90 bp CTGACCTCTTCTCCTTCAGTGAGACCTGTTCTCGAAGCGTGGAGTTaGCATAGGCGAAGGTGCTGGCCATCCCGATGCACACAGCAATGC +
Preference number: 1 (lower is better)
Translates to: LTSSPSVRPVLEAWS*HRRRCWPSRCTQQC
Trigger: GCATTGCTGTGTGCATCGGGATGGCCAGCACCTTCGCCTATGCCAACTCCACGCTTCGAGAACAGGTCTCACTGAAGGAGAAGAGGTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547718.5
3UTR GCA 90 bp TCAGTGAGACCTGTTCTCGAAGCGTGGAGTTGGCATAGGCGAAGGTaGTGGCCATCCCGATGCACACAGCAATGCCGAGCTTATGCTGAA +
Preference number: 1 (lower is better)
Translates to: SVRPVLEAWSWHRRR*WPSRCTQQCRAYAE
Trigger: TTCAGCATAAGCTCGGCATTGCTGTGTGCATCGGGATGGCCAGCACCTTCGCCTATGCCAACTCCACGCTTCGAGAACAGGTCTCACTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547718.5
3UTR TCA 90 bp TGCCGAGCTTATGCTGAAAGCACAGTTTGGCCAGGAGGATCAGGATaGAGGGGAGTCCTTTCTGGAGCCAGCAGATCACAGCCTTCAGCT +
Preference number: 1 (lower is better)
Translates to: CRAYAESTVWPGGSG*RGVLSGASRSQPSA
Trigger: AGCTGAAGGCTGTGATCTGCTGGCTCCAGAAAGGACTCCCCTTCATCCTGATCCTCCTGGCCAAACTGTGCTTTCAGCATAAGCTCGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547718.5
3UTR CCA 90 bp CTTGGGAGGAGGAATAGGGCAGGCAAGATTCTGGTGGCTTCTGCGTaGTCACCTGTGCCATCTCATGCCAGATTTCAGAGCAGGGAACAT +
Preference number: 1 (lower is better)
Translates to: LGRRNRAGKILVASA*SPVPSHARFQSREH
Trigger: ATGTTCCCTGCTCTGAAATCTGGCATGAGATGGCACAGGTGACCACGCAGAAGCCACCAGAATCTTGCCTGCCCTATTCCTCCTCCCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257575.9
3UTR GCA 90 bp AGGCAAGATTCTGGTGGCTTCTGCGTGGTCACCTGTGCCATCTCATaGCAGATTTCAGAGCAGGGAACATTTCAGAGGTGGAGAAGTGGC +
Preference number: 1 (lower is better)
Translates to: RQDSGGFCVVTCAIS*QISEQGTFQRWRSG
Trigger: GCCACTTCTCCACCTCTGAAATGTTCCCTGCTCTGAAATCTGGCATGAGATGGCACAGGTGACCACGCAGAAGCCACCAGAATCTTGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257575.9
3UTR GCA 90 bp GGAATAGGGCAGGCAAGATTCTGGTGGCTTCTGCGTGGTCACCTGTaGCATCTCATGCCAGATTTCAGAGCAGGGAACATTTCAGAGGTG +
Preference number: 1 (lower is better)
Translates to: GIGQARFWWLLRGHL*HLMPDFRAGNISEV
Trigger: CACCTCTGAAATGTTCCCTGCTCTGAAATCTGGCATGAGATGGCACAGGTGACCACGCAGAAGCCACCAGAATCTTGCCTGCCCTATTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257575.9
3UTR CCA 90 bp AAGAGAACAGACTTGGGAGGAGGAATAGGGCAGGCAAGATTCTGGTaGCTTCTGCGTGGTCACCTGTGCCATCTCATGCCAGATTTCAGA +
Preference number: 1 (lower is better)
Translates to: KRTDLGGGIGQARFW*LLRGHLCHLMPDFR
Trigger: TCTGAAATCTGGCATGAGATGGCACAGGTGACCACGCAGAAGCCACCAGAATCTTGCCTGCCCTATTCCTCCTCCCAAGTCTGTTCTCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257575.9
3UTR CCA 90 bp ATACTGGCTGACAGCGAGGTGGCTACAAAGCTCCTCCATTTCTCCTaGGGCTTGCATGGTAATCTGCCCACTAGCCACACAGATTGCTTT +
Preference number: 1 (lower is better)
Translates to: ILADSEVATKLLHFS*GLHGNLPTSHTDCF
Trigger: AAAGCAATCTGTGTGGCTAGTGGGCAGATTACCATGCAAGCCCCAGGAGAAATGGAGGAGCTTTGTAGCCACCTCGCTGTCAGCCAGTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257575.9
3UTR GCA 90 bp ACTACCCTGGTTGGTGGAAACATCCATAACATAGGTTGTCCTGTTTaGTCTGAAGGCTACCAGAGGGGATGGCAATGTCCACAGGAGCTG +
Preference number: 1 (lower is better)
Translates to: TTLVGGNIHNIGCPV*SEGYQRGWQCPQEL
Trigger: CAGCTCCTGTGGACATTGCCATCCCCTCTGGTAGCCTTCAGAGCAAACAGGACAACCTATGTTATGGATGTTTCCACCAACCAGGGTAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257575.9
3UTR GCA 90 bp GATTGTAACATCATGGCCATCGCCATAGTAACGGAGCTTGAAAGATaGTACACTGCCCTGGAACAGACGTCTTGCTGGGTACCAGGAGAG +
Preference number: 1 (lower is better)
Translates to: DCNIMAIAIVTELER*YTALEQTSCWVPGE
Trigger: CTCTCCTGGTACCCAGCAAGACGTCTGTTCCAGGGCAGTGTAGCATCTTTCAAGCTCCGTTACTATGGCGATGGCCATGATGTTACAATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257575.9
ENST00000392549.7
3UTR CCA 90 bp AATAAGAGAACAGACTTGGGAGGAGGAATAGGGCAGGCAAGATTCTaGTGGCTTCTGCGTGGTCACCTGTGCCATCTCATGCCAGATTTC +
Preference number: 1 (lower is better)
Translates to: NKRTDLGGGIGQARF*WLLRGHLCHLMPDF
Trigger: GAAATCTGGCATGAGATGGCACAGGTGACCACGCAGAAGCCACCAGAATCTTGCCTGCCCTATTCCTCCTCCCAAGTCTGTTCTCTTATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257575.9
3UTR CCA 90 bp CTCATGCCAGATTTCAGAGCAGGGAACATTTCAGAGGTGGAGAAGTaGCTCTGTCATAGAGATCACAGAAGCACAGATGGTTACGGTGCT +
Preference number: 1 (lower is better)
Translates to: LMPDFRAGNISEVEK*LCHRDHRSTDGYGA
Trigger: AGCACCGTAACCATCTGTGCTTCTGTGATCTCTATGACAGAGCCACTTCTCCACCTCTGAAATGTTCCCTGCTCTGAAATCTGGCATGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257575.9
3UTR GCA 90 bp GGCAGGATGATCTTTCCGATAAAAACCAGTTGCAGAAGTTCCTGTTaGTTCCCTTTGGTTTTTCCTCAGGGTAGGGAGAACAGAGCAGCT +
Preference number: 1 (lower is better)
Translates to: GRMIFPIKTSCRSSC*FPLVFPQGRENRAA
Trigger: AGCTGCTCTGTTCTCCCTACCCTGAGGAAAAACCAAAGGGAAGCAACAGGAACTTCTGCAACTGGTTTTTATCGGAAAGATCATCCTGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000257575.9
ENST00000392549.7
3UTR GCA 90 bp CTTCTAATCCCGAGTCTCAGCAGCCCGGATGTCTTCCTAACACTCTaGACATCATTCTTCTCTTCCGAAGCTGATGCACCTATCATATCT +
Preference number: 1 (lower is better)
Translates to: LLIPSLSSPDVFLTL*TSFFSSEADAPIIS
Trigger: AGATATGATAGGTGCATCAGCTTCGGAAGAGAAGAATGATGTGCAGAGTGTTAGGAAGACATCCGGGCTGCTGAGACTCGGGATTAGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257575.9
ENST00000407967.7
3UTR CCA 90 bp TGTGCCATCTCATGCCAGATTTCAGAGCAGGGAACATTTCAGAGGTaGAGAAGTGGCTCTGTCATAGAGATCACAGAAGCACAGATGGTT +
Preference number: 1 (lower is better)
Translates to: CAISCQISEQGTFQR*RSGSVIEITEAQMV
Trigger: AACCATCTGTGCTTCTGTGATCTCTATGACAGAGCCACTTCTCCACCTCTGAAATGTTCCCTGCTCTGAAATCTGGCATGAGATGGCACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257575.9
3UTR GCA 90 bp TACACACCTGCACTTTCATCAATCTTCTCCAGCTCCAATTTCTTGTaGCCCTTCAACAGCATCTGCAGGCAGGATGATCTTTCCGATAAA +
Preference number: 1 (lower is better)
Translates to: YTPALSSIFSSSNFL*PFNSICRQDDLSDK
Trigger: TTTATCGGAAAGATCATCCTGCCTGCAGATGCTGTTGAAGGGGCACAAGAAATTGGAGCTGGAGAAGATTGATGAAAGTGCAGGTGTGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257575.9
ENST00000392549.7
3UTR TCA 90 bp GAGAAAATAACCAACAAGTGGGAACTTCATGTATTGCCAGGTCCTTaGCTTGGAGTGGAGAAGGAAGATGCATCTAGAAGGGCATCAAGT +
Preference number: 1 (lower is better)
Translates to: EKITNKWELHVLPGP*LGVEKEDASRRASS
Trigger: ACTTGATGCCCTTCTAGATGCATCTTCCTTCTCCACTCCAAGTCAAGGACCTGGCAATACATGAAGTTCCCACTTGTTGGTTATTTTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257575.9
3UTR TCA 90 bp GGATGTCTTCCTAACACTCTGCACATCATTCTTCTCTTCCGAAGCTaGTGCACCTATCATATCTGTGTCCAAAGCTTGCCTTTCTTATTC +
Preference number: 1 (lower is better)
Translates to: GCLPNTLHIILLFRS*CTYHICVQSLPFLF
Trigger: GAATAAGAAAGGCAAGCTTTGGACACAGATATGATAGGTGCATCAGCTTCGGAAGAGAAGAATGATGTGCAGAGTGTTAGGAAGACATCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257575.9
ENST00000407967.7
3UTR-3UTR CCA 90 bp CAGATCACAGCCTTCAGCTCGGACAGGGCGGGGGCGGGCGTCCCAGGCTGCTCGCCGCGGTGGCCGCCATaGTGGAAATGGTGGTGGGGC +
Preference number: 2 (lower is better)
Translates to: QITAFSSDRAGAGVPGCSPRWPP*WKWWWG
Trigger: GCCCCACCACCATTTCCACCATGGCGGCCACCGCGG...CGAGCAGCCTGGGACGCCCGCCCCCGCCCTGTCCGAGCTGAAGGCTGTGATCTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000547718.5
3UTR-3UTR GCA 90 bp CTGGACGCGGGCATCTGGATGAACACGTCCCCGCCGCCAGCCGAGGAGCCCAGCCGCTGGTGGGGAGGCTaGCTCTGCCTTCAGACTCTC +
Preference number: 2 (lower is better)
Translates to: LDAGIWMNTSPPPAEEPSRWWGG*LCLQTL
Trigger: GAGAGTCTGAAGGCAGAGGCAGCCTCCCCACCAGCG...GCTGGGCTCCTCGGCTGGCGGCGGGGACGTGTTCATCCAGATGCCCGCGTCCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547718.5
3UTR-3UTR CCA 90 bp CAGATCACAGCCTTCAGCTCGGACAGGGCGGGGGCGGGCGTCCCAGGCTGCTCGTCGGAGCTGAGCGCCTaGCTGCGGTTTCTCGGGATC +
Preference number: 2 (lower is better)
Translates to: QITAFSSDRAGAGVPGCSSELSA*LRFLGI
Trigger: GATCCCGAGAAACCGCAGCCAGGCGCTCAGCTCCGA...CGAGCAGCCTGGGACGCCCGCCCCCGCCCTGTCCGAGCTGAAGGCTGTGATCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000547718.5
3UTR-3UTR CCA 90 bp ACAGATGGCGCAGATGTCACCAGCTTCTGTGCACTGCTGCCCGGTGGCTCGGACCGGTGGCCGCCATGGTaGAAATGGTGGTGGGGCTGG +
Preference number: 2 (lower is better)
Translates to: TDGADVTSFCALLPGGSDRWPPW*KWWWGW
Trigger: CCAGCCCCACCACCATTTCCACCATGGCGGCCACCG...GTCCGAGCCACCGGGCAGCAGTGCACAGAAGCTGGTGACATCTGCGCCATCTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547718.5
3UTR-3UTR GCA 90 bp CACGTCCACAGATGTCGAAGGACTTGCAGAGGCTGTAGAGAACGATCAGGACCCCCTCCCTCCTCCGAGTaGCCCCGGTGGTCCCCACCC +
Preference number: 2 (lower is better)
Translates to: HVHRCRRTCRGCRERSGPPPSSE*PRWSPP
Trigger: GGGTGGGGACCACCGGGGGCACTCGGAGGAGGGAGG...GGGTCCTGATCGTTCTCTACAGCCTCTGCAAGTCCTTCGACATCTGTGGACGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000547718.5
3UTR-3UTR CCA 90 bp GGAGAATCAGAGGCTCTCGGAACTCGGCCTGACAGATGGCGCAGATGTCACCAGCTGGACGCGGGCATCTaGATGAACACGTCCCCGCCG +
Preference number: 2 (lower is better)
Translates to: GESEALGTRPDRWRRCHQLDAGI*MNTSPP
Trigger: CGGCGGGGACGTGTTCATCCAGATGCCCGCGTCCAG...CTGGTGACATCTGCGCCATCTGTCAGGCCGAGTTCCGAGAGCCTCTGATTCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547718.5
3UTR-3UTR TCA 90 bp TTGTGCCCCTTCAACAGCATCTGGCACAGGAGAATCAGAGGCTCTCGGAACTCGACGCGGGCATCTGGATaGACACGTCCCCGCCGCCAG +
Preference number: 2 (lower is better)
Translates to: LCPFNSIWHRRIRGSRNSTRASG*TRPRRQ
Trigger: CTGGCGGCGGGGACGTGTTCATCCAGATGCCCGCGT...CGAGTTCCGAGAGCCTCTGATTCTCCTGTGCCAGATGCTGTTGAAGGGGCACAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547718.5
3UTR-3UTR TCA 90 bp CCCATGATGTATTTGTACCACAGCTGGATGGGGACAAGGGATCGGAACAGCTGGCACTCGCCTCGGAGCTaGGCGCCTGGCTGCGGTTTC +
Preference number: 2 (lower is better)
Translates to: PMMYLYHSWMGTRDRNSWHSPRS*APGCGF
Trigger: GAAACCGCAGCCAGGCGCTCAGCTCCGAGGCGAGTG...CCAGCTGTTCCGATCCCTTGTCCCCATCCAGCTGTGGTACAAATACATCATGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547718.5
3UTR-3UTR CCA 90 bp GAGAGCCAGGGATGCCAAGCCAAGGGGAAAGTCCTGGTTTGGTGGCACACAGGGGGCTACCAGAGGGGATaGCAATGTCCACAGGAGCTG +
Preference number: 2 (lower is better)
Translates to: ESQGCQAKGKVLVWWHTGGYQRG*QCPQEL
Trigger: CAGCTCCTGTGGACATTGCCATCCCCTCTGGTAGCC...CCCTGTGTGCCACCAAACCAGGACTTTCCCCTTGGCTTGGCATCCCTGGCTCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000257575.9
3UTR-3UTR TCA 90 bp TCTGGCACAGGAGAATCAGAGGCTCTCGGAACTCGGCCTGACAGATGGCGCAGAATGCCGAGCTTATGCTaGAAGCACAGTTTGGCCAGG +
Preference number: 2 (lower is better)
Translates to: SGTGESEALGTRPDRWRRMPSLC*KHSLAR
Trigger: CCTGGCCAAACTGTGCTTTCAGCATAAGCTCGGCAT...TCTGCGCCATCTGTCAGGCCGAGTTCCGAGAGCCTCTGATTCTCCTGTGCCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547718.5
3UTR-3UTR CCA 90 bp CTTGAAAGATGCTACACTGCCCTGGAACAGACGTCTTGCTGGGTACCAGGAGAGGGGCATGCTGACCCTTaGCGTCCTTCTGGGTGTCCT +
Preference number: 2 (lower is better)
Translates to: LERCYTALEQTSCWVPGEGHADP*RPSGCP
Trigger: AGGACACCCAGAAGGACGCCAAGGGTCAGCATGCCC...CTCTCCTGGTACCCAGCAAGACGTCTGTTCCAGGGCAGTGTAGCATCTTTCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257575.9
3UTR-3UTR CCA 90 bp CAATCTTCTCCAGCTCCAATTTCTTGTGCCCCTTCAACAGCATCTGCAGGCAGGACAGGGGCGGGACTTTaGGGTCAGAGGTGGTGGAGG +
Preference number: 2 (lower is better)
Translates to: QSSPAPISCAPSTASAGRTGAGL*GQRWWR
Trigger: CCTCCACCACCTCTGACCCCAAAGTCCCGCCCCTGT...CCTGCCTGCAGATGCTGTTGAAGGGGCACAAGAAATTGGAGCTGGAGAAGATTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257575.9
3UTR-3UTR CCA 90 bp CCAGGTCTGACTCCCAGCAGACTGTTCTATTTCCTTACACACCTGCACTTTCATAGGGAGCCCCCGCGGTaGCCGCCATGGTGGAAATGG +
Preference number: 2 (lower is better)
Translates to: PGLTPSRLFYFLTHLHFHREPPR*PPWWKW
Trigger: CCATTTCCACCATGGCGGCCACCGCGGGGGCTCCCT...ATGAAAGTGCAGGTGTGTAAGGAAATAGAACAGTCTGCTGGGAGTCAGACCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000547718.5
3UTR-3UTR CCA 90 bp CTGCACTTTCATCAATCTTCTCCAGCTCCAATTTCTTGTGCCCCTTCAACAGCATCCGAGTGCCCCCGGTaGTCCCCACCCACGTGCTGC +
Preference number: 2 (lower is better)
Translates to: LHFHQSSPAPISCAPSTASECPR*SPPTCC
Trigger: GCAGCACGTGGGTGGGGACCACCGGGGGCACTCGGA...TGCTGTTGAAGGGGCACAAGAAATTGGAGCTGGAGAAGATTGATGAAAGTGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000547718.5
3UTR-3UTR GCA 90 bp CGATCCCCACAATCCATAGCAGGTCAAAGAAGTCCAGCATCTCCAGGTTGGGCTTGCTGGCCATCCCGATaGACACAGCAATGCCGAGCT +
Preference number: 2 (lower is better)
Translates to: RSPQSIAGQRSPASPGWACWPSR*TQQCRA
Trigger: AGCTCGGCATTGCTGTGTGCATCGGGATGGCCAGCA...AGCCCAACCTGGAGATGCTGGACTTCTTTGACCTGCTATGGATTGTGGGGATCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547718.5
3UTR-3UTR TCA 90 bp GGTACAGAGAAGCTTCAGGGCTTTCCTAACTCCGCCCACACGTCCACAGATGTCGGCTCAGCTCCTCGATaGCCAGATAGAACTTTCCCT +
Preference number: 2 (lower is better)
Translates to: GTEKLQGFPNSAHTSTDVGSAPR*PDRTFP
Trigger: AGGGAAAGTTCTATCTGGTCATCGAGGAGCTGAGCC...GACATCTGTGGACGTGTGGGCGGAGTTAGGAAAGCCCTGAAGCTTCTCTGTACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547718.5
3UTR-3UTR GCA 90 bp ACTGTTCTATTTCCTTACACACCTGCACTTTCATCAATCTTCTCCAGCTCCAATGCGGGCGTCCCAGGCTaGTCGTCGCCTCCCTCCTCC +
Preference number: 2 (lower is better)
Translates to: TVLFPYTPALSSIFSSSNAGVPG*SSPPSS
Trigger: GGAGGAGGGAGGCGACGAGCAGCCTGGGACGCCCGC...ATTGGAGCTGGAGAAGATTGATGAAAGTGCAGGTGTGTAAGGAAATAGAACAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547718.5
3UTR-3UTR CCA 90 bp GCAGACTGTTCTATTTCCTTACACACCTGCACTTTCATCAATCTTCTCCAGCTCGCCCGAGAAGAGCGCTaGTGGGGAGGCTGCCTCTGC +
Preference number: 2 (lower is better)
Translates to: ADCSISLHTCTFINLLQLAREER*WGGCLC
Trigger: GCAGAGGCAGCCTCCCCACCAGCGCTCTTCTCGGGC...GAGCTGGAGAAGATTGATGAAAGTGCAGGTGTGTAAGGAAATAGAACAGTCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547718.5
3UTR-3UTR CCA 90 bp CCCATGATGTATTTGTACCACAGCTGGATGGGGACAAGGGATCGGAACAGCTGGCCTGTTCTCGAAGCGTaGAGTTGGCATAGGCGAAGG +
Preference number: 2 (lower is better)
Translates to: PMMYLYHSWMGTRDRNSWPVLEA*SWHRRR
Trigger: CCTTCGCCTATGCCAACTCCACGCTTCGAGAACAGG...CCAGCTGTTCCGATCCCTTGTCCCCATCCAGCTGTGGTACAAATACATCATGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547718.5
3UTR-3UTR CCA 90 bp AGAGTCTGGTGGGAATGGGATGTTCAGGAGTTATCTGGAAAAACGCACACCCCGTCCACTTCCACACCATaGCTGCGGCTGTCCCCTCTT +
Preference number: 2 (lower is better)
Translates to: RVWWEWDVQELSGKTHTPSTSTP*LRLSPL
Trigger: AAGAGGGGACAGCCGCAGCCATGGTGTGGAAGTGGA...CGGGGTGTGCGTTTTTCCAGATAACTCCTGAACATCCCATTCCCACCAGACTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000677328.1
3UTR CAA 90 bp TTGGCGCCAGCCTGTTGTGCTGAGGTTGACAATAAGAGAACAGACTaGGGAGGAGGAATAGGGCAGGCAAGATTCTGGTGGCTTCTGCGT +
Preference number: 2 (lower is better)
Translates to: LAPACCAEVDNKRTD*GGGIGQARFWWLLR
Trigger: ACGCAGAAGCCACCAGAATCTTGCCTGCCCTATTCCTCCTCCCAAGTCTGTTCTCTTATTGTCAACCTCAGCACAACAGGCTGGCGCCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257575.9
3UTR-3UTR TCA 90 bp AAAACACCAAAGGCAGCTGTTTGTCCTACAGCAGAAGTCCTAAAAGATTCCAGGTGGGTCCGGGCATGCTaGCCCTTGGCGTCCTTCTGG +
Preference number: 2 (lower is better)
Translates to: KTPKAAVCPTAEVLKDSRWVRAC*PLASFW
Trigger: CCAGAAGGACGCCAAGGGTCAGCATGCCCGGACCCA...CCTGGAATCTTTTAGGACTTCTGCTGTAGGACAAACAGCTGCCTTTGGTGTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257575.9
3UTR-3UTR TCA 90 bp GAGAAGTGGCTCTGTCATAGAGATCACAGAAGCACAGATGGTTACGGTGCTCCACTATCTGGGAGGCAGTaGTCTCTAGGCTCCTCCCCA +
Preference number: 2 (lower is better)
Translates to: EKWLCHRDHRSTDGYGAPLSGRQ*SLGSSP
Trigger: TGGGGAGGAGCCTAGAGATCACTGCCTCCCAGATAG...TGGAGCACCGTAACCATCTGTGCTTCTGTGATCTCTATGACAGAGCCACTTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257575.9
3UTR-3UTR TCA 90 bp CTGCGATCCCCACAATCCATAGCAGGTCAAAGAAGTCCAGCATCTCCAGGTTGGCCAGGATCCACAAGATaGCCAGCACTGACCTCTTCT +
Preference number: 2 (lower is better)
Translates to: LRSPQSIAGQRSPASPGWPGSTR*PALTSS
Trigger: AGAAGAGGTCAGTGCTGGTCATCTTGTGGATCCTGG...CCAACCTGGAGATGCTGGACTTCTTTGACCTGCTATGGATTGTGGGGATCGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547718.5
3UTR-3UTR GCA 90 bp CTCTCGTGTGCTTTTAGAAGACCGTGTCTGCTGGGCCCCATGCCTGGAATGTCTGGATGCTGCATGCTTTaGCTGCTGCGCATGAAGTAT +
Preference number: 2 (lower is better)
Translates to: LSCAFRRPCLLGPMPGMSGCCML*LLRMKY
Trigger: ATACTTCATGCGCAGCAGGCAAAGCATGCAGCATCC...AGACATTCCAGGCATGGGGCCCAGCAGACACGGTCTTCTAAAAGCACACGAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257575.9
3UTR-3UTR GCA 90 bp CCGAGTCTCAGCAGCCCGGATGTCTTCCTAACACTCTGCACATCATTCTTCTCTTTAGAAGACCGTGTCTaGTGGGCCCCATGCCTGGAA +
Preference number: 2 (lower is better)
Translates to: PSLSSPDVFLTLCTSFFSLEDRV*WAPCLE
Trigger: TTCCAGGCATGGGGCCCAGCAGACACGGTCTTCTAA...AGAGAAGAATGATGTGCAGAGTGTTAGGAAGACATCCGGGCTGCTGAGACTCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257575.9
3UTR-3UTR GCA 90 bp ACTGTTCTATTTCCTTACACACCTGCACTTTCATCAATCTTCTCCAGCTCCAATTGGTCCCCACCCACGTaGTGCAGCAGGGAGCCCCCG +
Preference number: 2 (lower is better)
Translates to: TVLFPYTPALSSIFSSSNWSPPT*CSREPP
Trigger: CGGGGGCTCCCTGCTGCAGCACGTGGGTGGGGACCA...ATTGGAGCTGGAGAAGATTGATGAAAGTGCAGGTGTGTAAGGAAATAGAACAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000547718.5
3UTR-3UTR CCA 90 bp TTACCTCTCTTTCTTCTAATCCCGAGTCTCAGCAGCCCGGATGTCTTCCTAACATGGGTTCCGTCACCCTaGAGATGGCTACAGGGAGGC +
Preference number: 2 (lower is better)
Translates to: LPLFLLIPSLSSPDVFLTWVPSP*RWLQGG
Trigger: GCCTCCCTGTAGCCATCTCCAGGGTGACGGAACCCA...TGTTAGGAAGACATCCGGGCTGCTGAGACTCGGGATTAGAAGAAAGAGAGGTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257575.9
ENST00000407967.7
3UTR-3UTR CCA 90 bp CCAGGTCTGACTCCCAGCAGACTGTTCTATTTCCTTACACACCTGCACTTTCATTGGAGGGGAACGAGCTaGTGGGGAGGCTGCCTGATA +
Preference number: 2 (lower is better)
Translates to: PGLTPSRLFYFLTHLHFHWRGTS*WGGCLI
Trigger: TATCAGGCAGCCTCCCCACCAGCTCGTTCCCCTCCA...ATGAAAGTGCAGGTGTGTAAGGAAATAGAACAGTCTGCTGGGAGTCAGACCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547718.5
3UTR-3UTR CCA 90 bp GCAGACTGTTCTATTTCCTTACACACCTGCACTTTCATCAATCTTCTCCAGCTCAGCCCAGCACCAGGCTaGAGGGGAACGAGCTGGTGG +
Preference number: 2 (lower is better)
Translates to: ADCSISLHTCTFINLLQLSPAPG*RGTSWW
Trigger: CCACCAGCTCGTTCCCCTCCAGCCTGGTGCTGGGCT...GAGCTGGAGAAGATTGATGAAAGTGCAGGTGTGTAAGGAAATAGAACAGTCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547718.5
3UTR CAA 90 bp ATCCCCACAATCCATAGCAGGTCAAAGAAGTCCAGCATCTCCAGGTaGGGCTTCAGGAATATGAGGCTGTTGTACAGCTGCTGGGAGCTG +
Preference number: 2 (lower is better)
Translates to: IPTIHSRSKKSSISR*GFRNMRLLYSCWEL
Trigger: CAGCTCCCAGCAGCTGTACAACAGCCTCATATTCCTGAAGCCCAACCTGGAGATGCTGGACTTCTTTGACCTGCTATGGATTGTGGGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547718.5
3UTR-3UTR GCA 90 bp CTCTCGTGTGCTTTTAGAAGACCGTGTCTGCTGGGCCCCATGCCTGGAATGTCTGGGAACTTCATGTATTaGCAGGTCCTTGACTTGGAG +
Preference number: 2 (lower is better)
Translates to: LSCAFRRPCLLGPMPGMSGNFMY*QVLDLE
Trigger: CTCCAAGTCAAGGACCTGGCAATACATGAAGTTCCC...AGACATTCCAGGCATGGGGCCCAGCAGACACGGTCTTCTAAAAGCACACGAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257575.9
3UTR-3UTR CCA 90 bp GCAGACTGTTCTATTTCCTTACACACCTGCACTTTCATCAATCTTCTCCAGCTCCGAGAAGAGCGCTGGTaGGGAGGCTGCCTCTGCCTT +
Preference number: 2 (lower is better)
Translates to: ADCSISLHTCTFINLLQLREERW*GGCLCL
Trigger: AAGGCAGAGGCAGCCTCCCCACCAGCGCTCTTCTCG...GAGCTGGAGAAGATTGATGAAAGTGCAGGTGTGTAAGGAAATAGAACAGTCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547718.5
3UTR CAA 90 bp AGCTGCATTCACATGGCCCCATTTCCCTCTGCTTCCCCTTCCCACTaGATTATTCAGGCAAGTGGGATTGTAACATCATGGCCATCGCCA +
Preference number: 2 (lower is better)
Translates to: SCIHMAPFPSASPSH*IIQASGIVTSWPSP
Trigger: TGGCGATGGCCATGATGTTACAATCCCACTTGCCTGAATAATCAAGTGGGAAGGGGAAGCAGAGGGAAATGGGGCCATGTGAATGCAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257575.9
ENST00000392549.7
3UTR-3UTR TCA 90 bp GAGAAGTGGCTCTGTCATAGAGATCACAGAAGCACAGATGGTTACGGTGCTCCAGGCGAGCTGATCATTTaGGGTCAAGAGTTGGAGACC +
Preference number: 2 (lower is better)
Translates to: EKWLCHRDHRSTDGYGAPGELII*GQELET
Trigger: GGTCTCCAACTCTTGACCTCAAATGATCAGCTCGCC...TGGAGCACCGTAACCATCTGTGCTTCTGTGATCTCTATGACAGAGCCACTTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257575.9
3UTR-3UTR TCA 90 bp GGTACAGAGAAGCTTCAGGGCTTTCCTAACTCCGCCCACACGTCCACAGATGTCACAGCTGCTGGGAGCTaGATGTATAAAGCACATAGA +
Preference number: 2 (lower is better)
Translates to: GTEKLQGFPNSAHTSTDVTAAGS*MYKAHR
Trigger: TCTATGTGCTTTATACATTCAGCTCCCAGCAGCTGT...GACATCTGTGGACGTGTGGGCGGAGTTAGGAAAGCCCTGAAGCTTCTCTGTACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547718.5
3UTR-3UTR CCA 90 bp CTGCACTTTCATCAATCTTCTCCAGCTCCAATTTCTTGTGCCCCTTCAACAGCACCAAGGGGAAAGTCCTaGTTTGGTGGCACACAGGGG +
Preference number: 2 (lower is better)
Translates to: LHFHQSSPAPISCAPSTAPRGKS*FGGTQG
Trigger: CCCCTGTGTGCCACCAAACCAGGACTTTCCCCTTGG...TGCTGTTGAAGGGGCACAAGAAATTGGAGCTGGAGAAGATTGATGAAAGTGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257575.9
ENST00000392549.7
3UTR-3UTR CCA 90 bp TTACCTCTCTTTCTTCTAATCCCGAGTCTCAGCAGCCCGGATGTCTTCCTAACAGAACAGACGTCTTGCTaGGTACCAGGAGAGAGCCAG +
Preference number: 2 (lower is better)
Translates to: LPLFLLIPSLSSPDVFLTEQTSC*VPGESQ
Trigger: CTGGCTCTCTCCTGGTACCCAGCAAGACGTCTGTTC...TGTTAGGAAGACATCCGGGCTGCTGAGACTCGGGATTAGAAGAAAGAGAGGTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257575.9
3UTR-3UTR TCA 90 bp AAGAAAACCTCAGATGGGACGTTCCCCCAGAGGGTAGGGCATGCACTAATAAAAGAAGGGCATCAAGTCTaGGTTAGGAAGACGTCCCCT +
Preference number: 2 (lower is better)
Translates to: KKTSDGTFPQRVGHALIKEGHQV*VRKTSP
Trigger: AGGGGACGTCTTCCTAACTCAGACTTGATGCCCTTC...TTTTATTAGTGCATGCCCTACCCTCTGGGGGAACGTCCCATCTGAGGTTTTCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000257575.9
3UTR-3UTR TCA 90 bp TGGAGAAGTGGCTCTGTCATAGAGATCACAGAAGCACAGATGGTTACGGTGCTCGTATTGCCAGGTCCTTaGCTTGGAGTGGAGAAGGAA +
Preference number: 2 (lower is better)
Translates to: WRSGSVIEITEAQMVTVLVLPGP*LGVEKE
Trigger: TTCCTTCTCCACTCCAAGTCAAGGACCTGGCAATAC...GAGCACCGTAACCATCTGTGCTTCTGTGATCTCTATGACAGAGCCACTTCTCCA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257575.9
3UTR-3UTR CCA 90 bp AATCAGAATTCCAGGTCTGACTCCCAGCAGACTGTTCTATTTCCTTACACACCTCCCTTGGCGTCCTTCTaGGTGTCCTCAGTGTTCGGT +
Preference number: 2 (lower is better)
Translates to: NQNSRSDSQQTVLFPYTPPLASF*VSSVFG
Trigger: ACCGAACACTGAGGACACCCAGAAGGACGCCAAGGG...AGGTGTGTAAGGAAATAGAACAGTCTGCTGGGAGTCAGACCTGGAATTCTGATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257575.9
3UTR CAA 90 bp GTTGTGAGGATGACAGCACGTAATCCAAGCAGGATGCTGCATGCTTaGCCTGCTGCGCATGAAGTATTTGGGACCTTAAGTCATTACAGG +
Preference number: 2 (lower is better)
Translates to: VVRMTARNPSRMLHA*PAAHEVFGTLSHYR
Trigger: CCTGTAATGACTTAAGGTCCCAAATACTTCATGCGCAGCAGGCAAAGCATGCAGCATCCTGCTTGGATTACGTGCTGTCATCCTCACAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257575.9
3UTR CAA 90 bp GTAATCTGCCCACTAGCCACACAGATTGCTTTCTCTGTAATGCCATaGGCGCCAGCCTGTTGTGCTGAGGTTGACAATAAGAGAACAGAC +
Preference number: 2 (lower is better)
Translates to: VICPLATQIAFSVMP*APACCAEVDNKRTD
Trigger: GTCTGTTCTCTTATTGTCAACCTCAGCACAACAGGCTGGCGCCAATGGCATTACAGAGAAAGCAATCTGTGTGGCTAGTGGGCAGATTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257575.9
3UTR-3UTR TCA 90 bp GAGAGTCACTCACTCACCTACCCTGAGCCACTGGGCAGATTCTTATTCTGCCCCTTTAAAACTCAGCTCTaGTGTCACCTTCTTCAGGAA +
Preference number: 2 (lower is better)
Translates to: ESHSLTYPEPLGRFLFCPFKTQL*CHLLQE
Trigger: TTCCTGAAGAAGGTGACATCAGAGCTGAGTTTTAAA...GGGGCAGAATAAGAATCTGCCCAGTGGCTCAGGGTAGGTGAGTGAGTGACTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677328.1
3UTR-3UTR GCA 90 bp TTACCTCTCTTTCTTCTAATCCCGAGTCTCAGCAGCCCGGATGTCTTCCTAACAGAGGCAGGATGTAAGTaGTTGAGGCCTGTTTCTCAG +
Preference number: 2 (lower is better)
Translates to: LPLFLLIPSLSSPDVFLTEAGCK*LRPVSQ
Trigger: CTGAGAAACAGGCCTCAAGCACTTACATCCTGCCTC...TGTTAGGAAGACATCCGGGCTGCTGAGACTCGGGATTAGAAGAAAGAGAGGTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257575.9
3UTR-3UTR CCA 90 bp TCTGCAGGCAGGATGATCTTTCCGATAAAAACCAGTTGCAGAAGTTCCTGTTGCGCCAGGTCCTTGACTTaGAGTGGAGAAGGAAGATGC +
Preference number: 2 (lower is better)
Translates to: SAGRMIFPIKTSCRSSCCARSLT*SGEGRC
Trigger: GCATCTTCCTTCTCCACTCCAAGTCAAGGACCTGGC...GCAACAGGAACTTCTGCAACTGGTTTTTATCGGAAAGATCATCCTGCCTGCAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000257575.9
3UTR-3UTR CCA 90 bp TGTGTTGGAAACACTCCTCATCAGACACTGTTTTCCCTAGGACAGAAGTTAAATTGGGTTCCGTCACCCTaGAGATGGCTACAGGGAGGC +
Preference number: 2 (lower is better)
Translates to: CVGNTPHQTLFSLGQKLNWVPSP*RWLQGG
Trigger: GCCTCCCTGTAGCCATCTCCAGGGTGACGGAACCCA...ATTTAACTTCTGTCCTAGGGAAAACAGTGTCTGATGAGGAGTGTTTCCAACACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257575.9
ENST00000407967.7
3UTR CAA 90 bp CCTTACACACCTGCACTTTCATCAATCTTCTCCAGCTCCAATTTCTaGTGCCCCTTCAACAGCATCTGCAGGCAGGATGATCTTTCCGAT +
Preference number: 2 (lower is better)
Translates to: PYTPALSSIFSSSNF*CPFNSICRQDDLSD
Trigger: ATCGGAAAGATCATCCTGCCTGCAGATGCTGTTGAAGGGGCACAAGAAATTGGAGCTGGAGAAGATTGATGAAAGTGCAGGTGTGTAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257575.9
ENST00000392549.7
3UTR-3UTR TCA 90 bp CCCTTCAACAGCATCTGCAGGCAGGATGATCTTTCCGATAAAAACCAGTTGCAGAACGAGAGAGGAAGATaGAGGTCAGAAGGACAAGAC +
Preference number: 2 (lower is better)
Translates to: PFNSICRQDDLSDKNQLQNERGR*RSEGQD
Trigger: GTCTTGTCCTTCTGACCTTCATCTTCCTCTCTCGTT...CTGCAACTGGTTTTTATCGGAAAGATCATCCTGCCTGCAGATGCTGTTGAAGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000257575.9
3UTR-3UTR CCA 90 bp AGCATCTGCAGGCAGGATGATCTTTCCGATAAAAACCAGTTGCAGAAGTTCCTGTCACAGAAGCACAGATaGTTACGGTGCTCCATGCCA +
Preference number: 2 (lower is better)
Translates to: SICRQDDLSDKNQLQKFLSQKHR*LRCSMP
Trigger: TGGCATGGAGCACCGTAACCATCTGTGCTTCTGTGA...CAGGAACTTCTGCAACTGGTTTTTATCGGAAAGATCATCCTGCCTGCAGATGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000257575.9
3UTR-3UTR CCA 90 bp AGCATCTGCAGGCAGGATGATCTTTCCGATAAAAACCAGTTGCAGAAGTTCCTGAAAGTCCTGGTTTGGTaGCACACAGGGGCAAATGTC +
Preference number: 2 (lower is better)
Translates to: SICRQDDLSDKNQLQKFLKVLVW*HTGANV
Trigger: GACATTTGCCCCTGTGTGCCACCAAACCAGGACTTT...CAGGAACTTCTGCAACTGGTTTTTATCGGAAAGATCATCCTGCCTGCAGATGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257575.9
ENST00000392549.7
3UTR-3UTR CCA 90 bp TTTGGAATCAGAATTCCAGGTCTGACTCCCAGCAGACTGTTCTATTTCCTTACAAAGGGGAGTCCTTTCTaGAGCCAGCAGATCACAGCC +
Preference number: 2 (lower is better)
Translates to: FGIRIPGLTPSRLFYFLTKGSPF*SQQITA
Trigger: GGCTGTGATCTGCTGGCTCCAGAAAGGACTCCCCTT...TGTAAGGAAATAGAACAGTCTGCTGGGAGTCAGACCTGGAATTCTGATTCCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547718.5
3UTR-3UTR TCA 90 bp AATCAGAATTCCAGGTCTGACTCCCAGCAGACTGTTCTATTTCCTTACACACCTCAGGATGTAAGTGCTTaGGGCCTGTTTCTCAGGAAG +
Preference number: 2 (lower is better)
Translates to: NQNSRSDSQQTVLFPYTPQDVSA*GLFLRK
Trigger: CTTCCTGAGAAACAGGCCTCAAGCACTTACATCCTG...AGGTGTGTAAGGAAATAGAACAGTCTGCTGGGAGTCAGACCTGGAATTCTGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257575.9
3UTR-3UTR TCA 90 bp TGTGTTGGAAACACTCCTCATCAGACACTGTTTTCCCTAGGACAGAAGTTAAATGAGGCTGAGGCGAGCTaGTCATTTGAGGTCAAGAGT +
Preference number: 2 (lower is better)
Translates to: CVGNTPHQTLFSLGQKLNEAEAS*SFEVKS
Trigger: ACTCTTGACCTCAAATGATCAGCTCGCCTCAGCCTC...ATTTAACTTCTGTCCTAGGGAAAACAGTGTCTGATGAGGAGTGTTTCCAACACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257575.9
3UTR-3UTR CCA 90 bp GAGAAGTGGCTCTGTCATAGAGATCACAGAAGCACAGATGGTTACGGTGCTCCAATTACAGGTATATGGTaGGGCCCAACAACTGTATTT +
Preference number: 2 (lower is better)
Translates to: EKWLCHRDHRSTDGYGAPITGIW*GPTTVF
Trigger: AAATACAGTTGTTGGGCCCCACCATATACCTGTAAT...TGGAGCACCGTAACCATCTGTGCTTCTGTGATCTCTATGACAGAGCCACTTCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257575.9
3UTR-3UTR CCA 90 bp GCAGACTGTTCTATTTCCTTACACACCTGCACTTTCATCAATCTTCTCCAGCTCGTCCTTGACTTGGAGTaGAGAAGGAAGATGCATCTA +
Preference number: 2 (lower is better)
Translates to: ADCSISLHTCTFINLLQLVLDLE*RRKMHL
Trigger: TAGATGCATCTTCCTTCTCCACTCCAAGTCAAGGAC...GAGCTGGAGAAGATTGATGAAAGTGCAGGTGTGTAAGGAAATAGAACAGTCTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257575.9
3UTR-3UTR TCA 90 bp ATAAGGGCAGGATACTGTGAACCTGATACTCGATTAACCCTACTTACAACAAATCCAACAACTGTATTTTaGAAATACTTTGGGCCAGGT +
Preference number: 2 (lower is better)
Translates to: IRAGYCEPDTRLTLLTTNPTTVF*KYFGPG
Trigger: ACCTGGCCCAAAGTATTTTCAAAATACAGTTGTTGG...ATTTGTTGTAAGTAGGGTTAATCGAGTATCAGGTTCACAGTATCCTGCCCTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257575.9
3UTR-3UTR CCA 90 bp TGTTTTGGTGGCATGGGCATAATTGGAGAAACCATTGGGGTATTCACTAGTAACAAAATAACCAACAAGTaGGAACTTCATGTATTGCCA +
Preference number: 2 (lower is better)
Translates to: CFGGMGIIGETIGVFTSNKITNK*ELHVLP
Trigger: TGGCAATACATGAAGTTCCCACTTGTTGGTTATTTT...GTTACTAGTGAATACCCCAATGGTTTCTCCAATTATGCCCATGCCACCAAAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000257575.9
3UTR GCA 72 bp GGCGTCCCAGGCTGCTCGTCGCCTCCCTCCTCCGAGTaGCCCCGGTGGTCCCCACCCACGTGCTGCAGCAGG +
Preference number: 3 (lower is better)
Translates to: GVPGCSSPPSSE*PRWSPPTCCSR
Trigger: CCTGCTGCAGCACGTGGGTGGGGACCACCGGGGGCACTCGGAGGAGGGAGGCGACGAGCAGCCTGGGACGCC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547718.5
3UTR TCA 72 bp CTCAGGAAGCCCCCGCAGGGCTGGGTCCGGGCATGCTaGCCCTTGGCGTCCTTCTGGGTGTCCTCAGTGTTC +
Preference number: 3 (lower is better)
Translates to: LRKPPQGWVRAC*PLASFWVSSVF
Trigger: GAACACTGAGGACACCCAGAAGGACGCCAAGGGTCAGCATGCCCGGACCCAGCCCTGCGGGGGCTTCCTGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000257575.9
3UTR CCA 72 bp CCACCTTCATCCACACTCGCCTCGGAGCTGAGCGCCTaGCTGCGGTTTCTCGGGATCCCAAGGACCGCTGGC +
Preference number: 3 (lower is better)
Translates to: PPSSTLASELSA*LRFLGIPRTAG
Trigger: GCCAGCGGTCCTTGGGATCCCGAGAAACCGCAGCCAGGCGCTCAGCTCCGAGGCGAGTGTGGATGAAGGTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547718.5
3UTR-3UTR CAA 90 bp GAGAGCCAGGGATGCCAAGCCAAGGGGAAAGTCCTGGTTTGGTGGCACACAGGGGACAGGGGCGGGACTTaGGGGTCAGAGGTGGTGGAG +
Preference number: 3 (lower is better)
Translates to: ESQGCQAKGKVLVWWHTGDRGGT*GSEVVE
Trigger: CTCCACCACCTCTGACCCCAAAGTCCCGCCCCTGTC...CCCTGTGTGCCACCAAACCAGGACTTTCCCCTTGGCTTGGCATCCCTGGCTCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000257575.9
3UTR TCA 72 bp GAGGTGGTGGAGGGCAAGAGGCAGGATGTAAGTGCTTaGGGCCTGTTTCTCAGGAAGCCCCCGCAGGGCTGG +
Preference number: 3 (lower is better)
Translates to: EVVEGKRQDVSA*GLFLRKPPQGW
Trigger: CCAGCCCTGCGGGGGCTTCCTGAGAAACAGGCCTCAAGCACTTACATCCTGCCTCTTGCCCTCCACCACCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000257575.9
3UTR TCA 72 bp CAAAGACGCCACCTTCATCCACACTCGCCTCGGAGCTaGGCGCCTGGCTGCGGTTTCTCGGGATCCCAAGGA +
Preference number: 3 (lower is better)
Translates to: QRRHLHPHSPRS*APGCGFSGSQG
Trigger: TCCTTGGGATCCCGAGAAACCGCAGCCAGGCGCTCAGCTCCGAGGCGAGTGTGGATGAAGGTGGCGTCTTTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547718.5
3UTR TCA 72 bp CTCTGTTGGAAACTTGGCCCGCCCATGCTGGCTGGGTaGCCCTGGGAAAGTTACCGCACCAAGCTCTGTGCC +
Preference number: 3 (lower is better)
Translates to: LCWKLGPPMLAG*PWESYRTKLCA
Trigger: GGCACAGAGCTTGGTGCGGTAACTTTCCCAGGGTCACCCAGCCAGCATGGGCGGGCCAAGTTTCCAACAGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257575.9
3UTR GCA 72 bp CTGTACCAGGCCTCTGTTGGAAACTTGGCCCGCCCATaGTGGCTGGGTGACCCTGGGAAAGTTACCGCACCA +
Preference number: 3 (lower is better)
Translates to: LYQASVGNLARP*WLGDPGKVTAP
Trigger: TGGTGCGGTAACTTTCCCAGGGTCACCCAGCCAGCATGGGCGGGCCAAGTTTCCAACAGAGGCCTGGTACAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257575.9
3UTR GCA 72 bp CGGCCTGACAGATGGCGCAGATGTCACCAGCTTCTGTaGACTGCTGCCCGGTGGCTCGGACTCCATAGTTCT +
Preference number: 3 (lower is better)
Translates to: RPDRWRRCHQLL*TAARWLGLHSS
Trigger: AGAACTATGGAGTCCGAGCCACCGGGCAGCAGTGCACAGAAGCTGGTGACATCTGCGCCATCTGTCAGGCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547718.5
3UTR CCA 72 bp AGGCCTCTGTTGGAAACTTGGCCCGCCCATGCTGGCTaGGTGACCCTGGGAAAGTTACCGCACCAAGCTCTG +
Preference number: 3 (lower is better)
Translates to: RPLLETWPAHAG*VTLGKLPHQAL
Trigger: CAGAGCTTGGTGCGGTAACTTTCCCAGGGTCACCCAGCCAGCATGGGCGGGCCAAGTTTCCAACAGAGGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257575.9
3UTR GCA 72 bp CAGACGTCTTGCTGGGTACCAGGAGAGAGCCAGGGATaGCAAGCCAAGGGGAAAGTCCTGGTTTGGTGGCAC +
Preference number: 3 (lower is better)
Translates to: QTSCWVPGESQG*QAKGKVLVWWH
Trigger: GTGCCACCAAACCAGGACTTTCCCCTTGGCTTGGCATCCCTGGCTCTCTCCTGGTACCCAGCAAGACGTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257575.9
ENST00000392549.7
3UTR GCA 72 bp CCTGTTCTCGAAGCGTGGAGTTGGCATAGGCGAAGGTaGTGGCCATCCCGATGCACACAGCAATGCCGAGCT +
Preference number: 3 (lower is better)
Translates to: PVLEAWSWHRRR*WPSRCTQQCRA
Trigger: AGCTCGGCATTGCTGTGTGCATCGGGATGGCCAGCACCTTCGCCTATGCCAACTCCACGCTTCGAGAACAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547718.5
3UTR CCA 72 bp GGAGAATCAGAGGCTCTCGGAACTCGGCCTGACAGATaGCGCAGATGTCACCAGCTTCTGTGCACTGCTGCC +
Preference number: 3 (lower is better)
Translates to: GESEALGTRPDR*RRCHQLLCTAA
Trigger: GGCAGCAGTGCACAGAAGCTGGTGACATCTGCGCCATCTGTCAGGCCGAGTTCCGAGAGCCTCTGATTCTCC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547718.5
3UTR-3UTR CAA 90 bp GAGAGCCAGGGATGCCAAGCCAAGGGGAAAGTCCTGGTTTGGTGGCACACAGGGCTTGAGCCCAGGAGTTaGAATCTAGCCTGGACAACC +
Preference number: 3 (lower is better)
Translates to: ESQGCQAKGKVLVWWHTGLEPRS*NLAWTT
Trigger: GGTTGTCCAGGCTAGATTCAAACTCCTGGGCTCAAG...CCCTGTGTGCCACCAAACCAGGACTTTCCCCTTGGCTTGGCATCCCTGGCTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257575.9
3UTR-3UTR CAA 90 bp GGTACAGAGAAGCTTCAGGGCTTTCCTAACTCCGCCCACACGTCCACAGATGTCACAGCCAGGATGATCTaGGGCAGGGCCACGATGAGG +
Preference number: 3 (lower is better)
Translates to: GTEKLQGFPNSAHTSTDVTARMI*GRATMR
Trigger: CCTCATCGTGGCCCTGCCCAAGATCATCCTGGCTGT...GACATCTGTGGACGTGTGGGCGGAGTTAGGAAAGCCCTGAAGCTTCTCTGTACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547718.5
3UTR TCA 72 bp TGGCACAGGAGAATCAGAGGCTCTCGGAACTCGGCCTaGCAGATGGCGCAGATGTCACCAGCTTCTGTGCAC +
Preference number: 3 (lower is better)
Translates to: WHRRIRGSRNSA*QMAQMSPASVH
Trigger: GTGCACAGAAGCTGGTGACATCTGCGCCATCTGTCAGGCCGAGTTCCGAGAGCCTCTGATTCTCCTGTGCCA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547718.5
3UTR CCA 72 bp CAGGGATGCCAAGCCAAGGGGAAAGTCCTGGTTTGGTaGCACACAGGGGCAAATGTCCTGAATCTACGGCGG +
Preference number: 3 (lower is better)
Translates to: QGCQAKGKVLVW*HTGANVLNLRR
Trigger: CCGCCGTAGATTCAGGACATTTGCCCCTGTGTGCCACCAAACCAGGACTTTCCCCTTGGCTTGGCATCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257575.9
3UTR CCA 72 bp TTGGCCAGGAGGATCAGGATGAAGGGGAGTCCTTTCTaGAGCCAGCAGATCACAGCCTTCAGCTCGGACAGG +
Preference number: 3 (lower is better)
Translates to: LARRIRMKGSPF*SQQITAFSSDR
Trigger: CCTGTCCGAGCTGAAGGCTGTGATCTGCTGGCTCCAGAAAGGACTCCCCTTCATCCTGATCCTCCTGGCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547718.5
3UTR-3UTR CAA 90 bp TCTGGCACAGGAGAATCAGAGGCTCTCGGAACTCGGCCTGACAGATGGCGCAGAAGGAATATGAGGCTGTaGTACAGCTGCTGGGAGCTG +
Preference number: 3 (lower is better)
Translates to: SGTGESEALGTRPDRWRRRNMRL*YSCWEL
Trigger: CAGCTCCCAGCAGCTGTACAACAGCCTCATATTCCT...TCTGCGCCATCTGTCAGGCCGAGTTCCGAGAGCCTCTGATTCTCCTGTGCCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547718.5
3UTR GCA 72 bp CTTGAAAGATGCTACACTGCCCTGGAACAGACGTCTTaGTGGGTACCAGGAGAGAGCCAGGGATGCCAAGCC +
Preference number: 3 (lower is better)
Translates to: LERCYTALEQTS*WVPGESQGCQA
Trigger: GGCTTGGCATCCCTGGCTCTCTCCTGGTACCCAGCAAGACGTCTGTTCCAGGGCAGTGTAGCATCTTTCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257575.9
ENST00000392549.7
3UTR CCA 72 bp GACTTGGGAGGAGGAATAGGGCAGGCAAGATTCTGGTaGCTTCTGCGTGGTCACCTGTGCCATCTCATGCCA +
Preference number: 3 (lower is better)
Translates to: DLGGGIGQARFW*LLRGHLCHLMP
Trigger: TGGCATGAGATGGCACAGGTGACCACGCAGAAGCCACCAGAATCTTGCCTGCCCTATTCCTCCTCCCAAGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257575.9
3UTR CCA 72 bp AGCCAGGGATGCCAAGCCAAGGGGAAAGTCCTGGTTTaGTGGCACACAGGGGCAAATGTCCTGAATCTACGG +
Preference number: 3 (lower is better)
Translates to: SQGCQAKGKVLV*WHTGANVLNLR
Trigger: CCGTAGATTCAGGACATTTGCCCCTGTGTGCCACCAAACCAGGACTTTCCCCTTGGCTTGGCATCCCTGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257575.9
3UTR CCA 72 bp CAGGGATGCCAAGCCAAGGGGAAAGTCCTGGTTTGGTaGCACACAGGGGCAAATGTCCTGAATCCTTGGCGT +
Preference number: 3 (lower is better)
Translates to: QGCQAKGKVLVW*HTGANVLNPWR
Trigger: ACGCCAAGGATTCAGGACATTTGCCCCTGTGTGCCACCAAACCAGGACTTTCCCCTTGGCTTGGCATCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392549.7
3UTR CCA 72 bp AGCCAGGGATGCCAAGCCAAGGGGAAAGTCCTGGTTTaGTGGCACACAGGGGCAAATGTCCTGAATCCTTGG +
Preference number: 3 (lower is better)
Translates to: SQGCQAKGKVLV*WHTGANVLNPW
Trigger: CCAAGGATTCAGGACATTTGCCCCTGTGTGCCACCAAACCAGGACTTTCCCCTTGGCTTGGCATCCCTGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392549.7
3UTR CCA 72 bp GTTCTCGAAGCGTGGAGTTGGCATAGGCGAAGGTGCTaGCCATCCCGATGCACACAGCAATGCCGAGCTTAT +
Preference number: 3 (lower is better)
Translates to: VLEAWSWHRRRC*PSRCTQQCRAY
Trigger: ATAAGCTCGGCATTGCTGTGTGCATCGGGATGGCCAGCACCTTCGCCTATGCCAACTCCACGCTTCGAGAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547718.5
3UTR CCA 72 bp TCTCCTTCAGTGAGACCTGTTCTCGAAGCGTGGAGTTaGCATAGGCGAAGGTGCTGGCCATCCCGATGCACA +
Preference number: 3 (lower is better)
Translates to: SPSVRPVLEAWS*HRRRCWPSRCT
Trigger: TGTGCATCGGGATGGCCAGCACCTTCGCCTATGCCAACTCCACGCTTCGAGAACAGGTCTCACTGAAGGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547718.5
3UTR CCA 72 bp ACCTCTTCTCCTTCAGTGAGACCTGTTCTCGAAGCGTaGAGTTGGCATAGGCGAAGGTGCTGGCCATCCCGA +
Preference number: 3 (lower is better)
Translates to: TSSPSVRPVLEA*SWHRRRCWPSR
Trigger: TCGGGATGGCCAGCACCTTCGCCTATGCCAACTCCACGCTTCGAGAACAGGTCTCACTGAAGGAGAAGAGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547718.5
3UTR CCA 72 bp CGCAGATGTCACCAGCTTCTGTGCACTGCTGCCCGGTaGCTCGGACTCCATAGTTCTGAGAGGTACAGAGAA +
Preference number: 3 (lower is better)
Translates to: RRCHQLLCTAAR*LGLHSSERYRE
Trigger: TTCTCTGTACCTCTCAGAACTATGGAGTCCGAGCCACCGGGCAGCAGTGCACAGAAGCTGGTGACATCTGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547718.5
3UTR GCA 72 bp TGGAGTTGGCATAGGCGAAGGTGCTGGCCATCCCGATaGACACAGCAATGCCGAGCTTATGCTGAAAGCACA +
Preference number: 3 (lower is better)
Translates to: WSWHRRRCWPSR*TQQCRAYAEST
Trigger: TGTGCTTTCAGCATAAGCTCGGCATTGCTGTGTGCATCGGGATGGCCAGCACCTTCGCCTATGCCAACTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547718.5
3UTR CCA 72 bp ACAGACTTGGGAGGAGGAATAGGGCAGGCAAGATTCTaGTGGCTTCTGCGTGGTCACCTGTGCCATCTCATG +
Preference number: 3 (lower is better)
Translates to: TDLGGGIGQARF*WLLRGHLCHLM
Trigger: CATGAGATGGCACAGGTGACCACGCAGAAGCCACCAGAATCTTGCCTGCCCTATTCCTCCTCCCAAGTCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257575.9
3UTR CCA 72 bp GAGGAGTCGTCACCCATGATGTATTTGTACCACAGCTaGATGGGGACAAGGGATCGGAACAGCTGGCTCAGC +
Preference number: 3 (lower is better)
Translates to: EESSPMMYLYHS*MGTRDRNSWLS
Trigger: GCTGAGCCAGCTGTTCCGATCCCTTGTCCCCATCCAGCTGTGGTACAAATACATCATGGGTGACGACTCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547718.5
3UTR-3UTR CAA 90 bp GGAGAATCAGAGGCTCTCGGAACTCGGCCTGACAGATGGCGCAGATGTCACCAGAACTTTCCCTTGGACTaGACAGCCAGGATGATCTTG +
Preference number: 3 (lower is better)
Translates to: GESEALGTRPDRWRRCHQNFPLD*TARMIL
Trigger: CAAGATCATCCTGGCTGTCAAGTCCAAGGGAAAGTT...CTGGTGACATCTGCGCCATCTGTCAGGCCGAGTTCCGAGAGCCTCTGATTCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547718.5
3UTR CCA 72 bp AGGAATAGGGCAGGCAAGATTCTGGTGGCTTCTGCGTaGTCACCTGTGCCATCTCATGCCAGATTTCAGAGC +
Preference number: 3 (lower is better)
Translates to: RNRAGKILVASA*SPVPSHARFQS
Trigger: GCTCTGAAATCTGGCATGAGATGGCACAGGTGACCACGCAGAAGCCACCAGAATCTTGCCTGCCCTATTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257575.9
3UTR GCA 72 bp CAGGCAAGATTCTGGTGGCTTCTGCGTGGTCACCTGTaGCATCTCATGCCAGATTTCAGAGCAGGGAACATT +
Preference number: 3 (lower is better)
Translates to: QARFWWLLRGHL*HLMPDFRAGNI
Trigger: AATGTTCCCTGCTCTGAAATCTGGCATGAGATGGCACAGGTGACCACGCAGAAGCCACCAGAATCTTGCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257575.9
3UTR GCA 72 bp GGCTTGCATGGTAATCTGCCCACTAGCCACACAGATTaGTTTCTCTGTAATGCCATTGGCGCCAGCCTGTTG +
Preference number: 3 (lower is better)
Translates to: GLHGNLPTSHTD*FLCNAIGASLL
Trigger: CAACAGGCTGGCGCCAATGGCATTACAGAGAAAGCAATCTGTGTGGCTAGTGGGCAGATTACCATGCAAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257575.9
3UTR GCA 72 bp CCGAGTCTCAGCAGCCCGGATGTCTTCCTAACACTCTaGACATCATTCTTCTCTTCCGAAGCTGATGCACCT +
Preference number: 3 (lower is better)
Translates to: PSLSSPDVFLTL*TSFFSSEADAP
Trigger: AGGTGCATCAGCTTCGGAAGAGAAGAATGATGTGCAGAGTGTTAGGAAGACATCCGGGCTGCTGAGACTCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257575.9
ENST00000407967.7
3UTR-3UTR CAA 90 bp ACTTTCATCAATCTTCTCCAGCTCCAATTTCTTGTGCCCCTTCAACAGCATCTGGGAAGACGTCCCCTTTaGCAGGGGAAGGAGGCACGC +
Preference number: 3 (lower is better)
Translates to: TFINLLQLQFLVPLQQHLGRRPL*QGKEAR
Trigger: GCGTGCCTCCTTCCCCTGCAAAAGGGGACGTCTTCC...CAGATGCTGTTGAAGGGGCACAAGAAATTGGAGCTGGAGAAGATTGATGAAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000257575.9
3UTR GCA 72 bp ATCATGGCCATCGCCATAGTAACGGAGCTTGAAAGATaGTACACTGCCCTGGAACAGACGTCTTGCTGGGTA +
Preference number: 3 (lower is better)
Translates to: IMAIAIVTELER*YTALEQTSCWV
Trigger: TACCCAGCAAGACGTCTGTTCCAGGGCAGTGTAGCATCTTTCAAGCTCCGTTACTATGGCGATGGCCATGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257575.9
ENST00000392549.7
3UTR TCA 72 bp TGGGTTCCGTCACCCTGGAGATGGCTACAGGGAGGCTaGGTGACTTCCCAAAGTAATAAAGAGTTTGGAATC +
Preference number: 3 (lower is better)
Translates to: WVPSPWRWLQGG*VTSQSNKEFGI
Trigger: GATTCCAAACTCTTTATTACTTTGGGAAGTCACTCAGCCTCCCTGTAGCCATCTCCAGGGTGACGGAACCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257575.9
ENST00000392549.7
ENST00000407967.7
ENST00000547718.5
3UTR-3UTR CAA 90 bp CTGCACTTTCATCAATCTTCTCCAGCTCCAATTTCTTGTGCCCCTTCAACAGCATTCTCTGTAATGCCATaGGCGCCAGCCTGTTGTGCT +
Preference number: 3 (lower is better)
Translates to: LHFHQSSPAPISCAPSTAFSVMP*APACCA
Trigger: AGCACAACAGGCTGGCGCCAATGGCATTACAGAGAA...TGCTGTTGAAGGGGCACAAGAAATTGGAGCTGGAGAAGATTGATGAAAGTGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257575.9
3UTR GCA 72 bp GTTGGTGGAAACATCCATAACATAGGTTGTCCTGTTTaGTCTGAAGGCTACCAGAGGGGATGGCAATGTCCA +
Preference number: 3 (lower is better)
Translates to: VGGNIHNIGCPV*SEGYQRGWQCP
Trigger: TGGACATTGCCATCCCCTCTGGTAGCCTTCAGAGCAAACAGGACAACCTATGTTATGGATGTTTCCACCAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257575.9
3UTR-3UTR CAA 90 bp TTACCTCTCTTTCTTCTAATCCCGAGTCTCAGCAGCCCGGATGTCTTCCTAACAATGCCACTACCCTGGTaGGTGGAAACATCCATAACA +
Preference number: 3 (lower is better)
Translates to: LPLFLLIPSLSSPDVFLTMPLPW*VETSIT
Trigger: TGTTATGGATGTTTCCACCAACCAGGGTAGTGGCAT...TGTTAGGAAGACATCCGGGCTGCTGAGACTCGGGATTAGAAGAAAGAGAGGTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257575.9
3UTR-3UTR CAA 90 bp CTGCACTTTCATCAATCTTCTCCAGCTCCAATTTCTTGTGCCCCTTCAACAGCATCCTGTTGCTTCCCTTaGGTTTTTCCTCAGGGTAGG +
Preference number: 3 (lower is better)
Translates to: LHFHQSSPAPISCAPSTASCCFP*VFPQGR
Trigger: CCTACCCTGAGGAAAAACCAAAGGGAAGCAACAGGA...TGCTGTTGAAGGGGCACAAGAAATTGGAGCTGGAGAAGATTGATGAAAGTGCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257575.9
ENST00000392549.7
3UTR-3UTR CAA 90 bp CTGCACTTTCATCAATCTTCTCCAGCTCCAATTTCTTGTGCCCCTTCAACAGCATCACCCATGATGTATTaGTACCACAGCTGGATGGGG +
Preference number: 3 (lower is better)
Translates to: LHFHQSSPAPISCAPSTASPMMY*YHSWMG
Trigger: CCCCATCCAGCTGTGGTACAAATACATCATGGGTGA...TGCTGTTGAAGGGGCACAAGAAATTGGAGCTGGAGAAGATTGATGAAAGTGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547718.5
3UTR-3UTR CAA 90 bp AATCAGAATTCCAGGTCTGACTCCCAGCAGACTGTTCTATTTCCTTACACACCTGCAGGATGTAAGTGCTaGAGGCCTGTTTCTCAGGAA +
Preference number: 3 (lower is better)
Translates to: NQNSRSDSQQTVLFPYTPAGCKC*RPVSQE
Trigger: TTCCTGAGAAACAGGCCTCAAGCACTTACATCCTGC...AGGTGTGTAAGGAAATAGAACAGTCTGCTGGGAGTCAGACCTGGAATTCTGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257575.9
3UTR TCA 72 bp TCCAAGCAGGATGCTGCATGCTTTGCCTGCTGCGCATaGAGTATTTGGGACCTTAAGTCATTACAGGTATAT +
Preference number: 3 (lower is better)
Translates to: SKQDAACFACCA*SIWDLKSLQVY
Trigger: ATATACCTGTAATGACTTAAGGTCCCAAATACTTCATGCGCAGCAGGCAAAGCATGCAGCATCCTGCTTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257575.9
3UTR-3UTR CAA 90 bp ATATTTTACATGAAGAGGTCCATTTCTAAGGACTTCGTGGAACTTGAGTCAGTGTGCCAGGTCCTTGACTaGGAGTGGAGAAGGAAGATG +
Preference number: 3 (lower is better)
Translates to: IFYMKRSISKDFVELESVCQVLD*EWRRKM
Trigger: CATCTTCCTTCTCCACTCCAAGTCAAGGACCTGGCA...CACTGACTCAAGTTCCACGAAGTCCTTAGAAATGGACCTCTTCATGTAAAATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257575.9
3UTR TCA 72 bp AAAGTAATAAAGAGTTTGGAATCAGAATTCCAGGTCTaGCTCCCAGCAGACTGTTCTATTTCCTTACACACC +
Preference number: 3 (lower is better)
Translates to: KVIKSLESEFQV*LPADCSISLHT
Trigger: GGTGTGTAAGGAAATAGAACAGTCTGCTGGGAGTCAGACCTGGAATTCTGATTCCAAACTCTTTATTACTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257575.9
ENST00000392549.7
ENST00000547718.5
3UTR CCA 72 bp CTTGAGCCCAGGAGTTTGAATCTAGCCTGGACAACCTaGATTTTTATTAGAAACCTCATCTCTAATAAATTT +
Preference number: 3 (lower is better)
Translates to: LEPRSLNLAWTT*IFIRNLISNKF
Trigger: AAATTTATTAGAGATGAGGTTTCTAATAAAAATCCAGGTTGTCCAGGCTAGATTCAAACTCCTGGGCTCAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000257575.9
3UTR TCA 72 bp ATTCCCTCACATTTATTATTCTCAAGATATTTTACATaGAGAGGTCCATTTCTAAGGACTTCGTGGAACTTG +
Preference number: 3 (lower is better)
Translates to: IPSHLLFSRYFT*RGPFLRTSWNL
Trigger: CAAGTTCCACGAAGTCCTTAGAAATGGACCTCTTCATGTAAAATATCTTGAGAATAATAAATGTGAGGGAAT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257575.9
ENST00000407967.7
CDS-3UTR CCA 90 bp AGCAGATCACAGCCTTCAGCTCGGACAGGGCGGGGGCGGGCGTCCCAGGCTGCTAGCCCAGCACCAGGCTaGAGGGGAACGAGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: SRSQPSARTGRGRASQAASPAPG*RGTSWW
Trigger: CCACCAGCTCGTTCCCCTCCAGCCTGGTGCTGGGCT...AGCAGCCTGGGACGCCCGCCCCCGCCCTGTCCGAGCTGAAGGCTGTGATCTGCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000547718.5
CDS-3UTR GCA 90 bp TACCACAGCTGGATGGGGACAAGGGATCGGAACAGCTGGCTCAGCTCCTCGATGGCGGGCGTCCCAGGCTaGTCGTCGCCTCCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: YHSWMGTRDRNSWLSSSMAGVPG*SSPPSS
Trigger: GGAGGAGGGAGGCGACGAGCAGCCTGGGACGCCCGC...CATCGAGGAGCTGAGCCAGCTGTTCCGATCCCTTGTCCCCATCCAGCTGTGGTA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547718.5
CDS-3UTR TCA 90 bp AGAGAGCCAGGGATGCCAAGCCAAGGGGAAAGTCCTGGTTTGGTGGCACACAGGACGCGGGCATCTGGATaGACACGTCCCCGCCGCCAG +
Preference number: 4 (lower is better)
Translates to: REPGMPSQGESPGLVAHRTRASG*TRPRRQ
Trigger: CTGGCGGCGGGGACGTGTTCATCCAGATGCCCGCGT...CCTGTGTGCCACCAAACCAGGACTTTCCCCTTGGCTTGGCATCCCTGGCTCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257575.9
ENST00000392549.7
CDS-3UTR GCA 90 bp ATCTTGGGCAGGGCCACGATGAGGCACTTGAGGGCGATGGTGATGTACTTCAGACCTCCCTCCTCCGAGTaGCCCCGGTGGTCCCCACCC +
Preference number: 4 (lower is better)
Translates to: ILGRATMRHLRAMVMYFRPPSSE*PRWSPP
Trigger: GGGTGGGGACCACCGGGGGCACTCGGAGGAGGGAGG...TCTGAAGTACATCACCATCGCCCTCAAGTGCCTCATCGTGGCCCTGCCCAAGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547718.5
CDS-3UTR GCA 90 bp ACAGATGGCGCAGATGTCACCAGCTTCTGTGCACTGCTGCCCGGTGGCTCGGACGCTTCTGTGCACTGCTaGCCGGTGGCTCGGACTCCA +
Preference number: 4 (lower is better)
Translates to: TDGADVTSFCALLPGGSDASVHC*PVARTP
Trigger: TGGAGTCCGAGCCACCGGGCAGCAGTGCACAGAAGC...GTCCGAGCCACCGGGCAGCAGTGCACAGAAGCTGGTGACATCTGCGCCATCTGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547718.5
CDS-3UTR GCA 90 bp CAGATCACAGCCTTCAGCTCGGACAGGGCGGGGGCGGGCGTCCCAGGCTGCTCGAAGGACCGCTGGCTCTaGAGTCTTCAAGTTCAATGG +
Preference number: 4 (lower is better)
Translates to: QITAFSSDRAGAGVPGCSKDRWL*SLQVQW
Trigger: CCATTGAACTTGAAGACTGCAGAGCCAGCGGTCCTT...CGAGCAGCCTGGGACGCCCGCCCCCGCCCTGTCCGAGCTGAAGGCTGTGATCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000547718.5
CDS-3UTR CCA 90 bp TACCACAGCTGGATGGGGACAAGGGATCGGAACAGCTGGCTCAGCTCCTCGATGAGGGAGCCCCCGCGGTaGCCGCCATGGTGGAAATGG +
Preference number: 4 (lower is better)
Translates to: YHSWMGTRDRNSWLSSSMREPPR*PPWWKW
Trigger: CCATTTCCACCATGGCGGCCACCGCGGGGGCTCCCT...CATCGAGGAGCTGAGCCAGCTGTTCCGATCCCTTGTCCCCATCCAGCTGTGGTA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000547718.5
CDS-3UTR CCA 90 bp CAGATCACAGCCTTCAGCTCGGACAGGGCGGGGGCGGGCGTCCCAGGCTGCTCGTATTTGTACCACAGCTaGATGGGGACAAGGGATCGG +
Preference number: 4 (lower is better)
Translates to: QITAFSSDRAGAGVPGCSYLYHS*MGTRDR
Trigger: CCGATCCCTTGTCCCCATCCAGCTGTGGTACAAATA...CGAGCAGCCTGGGACGCCCGCCCCCGCCCTGTCCGAGCTGAAGGCTGTGATCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000547718.5
CDS-3UTR GCA 90 bp AACACGTCCCCGCCGCCAGCCGAGGAGCCCAGCACCAGGCTGGAGGGGAACGAGCAGAGACTCCAAACCTaGCCAGACAATTCAGCAATC +
Preference number: 4 (lower is better)
Translates to: NTSPPPAEEPSTRLEGNEQRLQT*PDNSAI
Trigger: GATTGCTGAATTGTCTGGGCAGGTTTGGAGTCTCTG...CTCGTTCCCCTCCAGCCTGGTGCTGGGCTCCTCGGCTGGCGGCGGGGACGTGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547718.5
CDS-3UTR GCA 90 bp GAGCTTGAAAGATGCTACACTGCCCTGGAACAGACGTCTTGCTGGGTACCAGGAGCGGGCGTCCCAGGCTaGTCGTCGCCTCCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: ELERCYTALEQTSCWVPGAGVPG*SSPPSS
Trigger: GGAGGAGGGAGGCGACGAGCAGCCTGGGACGCCCGC...TCCTGGTACCCAGCAAGACGTCTGTTCCAGGGCAGTGTAGCATCTTTCAAGCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257575.9
ENST00000392549.7
CDS-3UTR GCA 90 bp ACAGATGGCGCAGATGTCACCAGCTTCTGTGCACTGCTGCCCGGTGGCTCGGACTGTCACCAGCTTCTGTaGACTGCTGCCCGGTGGCTC +
Preference number: 4 (lower is better)
Translates to: TDGADVTSFCALLPGGSDCHQLL*TAARWL
Trigger: GAGCCACCGGGCAGCAGTGCACAGAAGCTGGTGACA...GTCCGAGCCACCGGGCAGCAGTGCACAGAAGCTGGTGACATCTGCGCCATCTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547718.5
CDS-3UTR CCA 90 bp GCTGCCTCTGCCTTCAGACTCTCAAAGACGCCACCTTCATCCACACTCGCCTCGCTGGACGCGGGCATCTaGATGAACACGTCCCCGCCG +
Preference number: 4 (lower is better)
Translates to: AASAFRLSKTPPSSTLASLDAGI*MNTSPP
Trigger: CGGCGGGGACGTGTTCATCCAGATGCCCGCGTCCAG...CGAGGCGAGTGTGGATGAAGGTGGCGTCTTTGAGAGTCTGAAGGCAGAGGCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547718.5
CDS-3UTR CCA 90 bp TCTGGCACAGGAGAATCAGAGGCTCTCGGAACTCGGCCTGACAGATGGCGCAGACGGTGGCCGCCATGGTaGAAATGGTGGTGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: SGTGESEALGTRPDRWRRRWPPW*KWWWGW
Trigger: CCAGCCCCACCACCATTTCCACCATGGCGGCCACCG...TCTGCGCCATCTGTCAGGCCGAGTTCCGAGAGCCTCTGATTCTCCTGTGCCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547718.5
CDS-3UTR CCA 90 bp ATGCCAAGCCAAGGGGAAAGTCCTGGTTTGGTGGCACACAGGGGCAAATGTCCTTCCGAGTGCCCCCGGTaGTCCCCACCCACGTGCTGC +
Preference number: 4 (lower is better)
Translates to: MPSQGESPGLVAHRGKCPSECPR*SPPTCC
Trigger: GCAGCACGTGGGTGGGGACCACCGGGGGCACTCGGA...AGGACATTTGCCCCTGTGTGCCACCAAACCAGGACTTTCCCCTTGGCTTGGCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000257575.9
ENST00000392549.7
CDS-3UTR CCA 90 bp CCCTCTTCCTGCCGTGCCCTTGTGGCTTTGCGATGCCTGGGTAACTCCCAGCCCTCCACTTCCACACCATaGCTGCGGCTGTCCCCTCTT +
Preference number: 4 (lower is better)
Translates to: PSSCRALVALRCLGNSQPSTSTP*LRLSPL
Trigger: AAGAGGGGACAGCCGCAGCCATGGTGTGGAAGTGGA...GGGCTGGGAGTTACCCAGGCATCGCAAAGCCACAAGGGCACGGCAGGAAGAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677328.1
CDS-3UTR TCA 90 bp TCCAACGGGGACTCCTGGCTGCTTTCGCACTGGTATAGGGGAATTCATGTAGCCACGCGGGCATCTGGATaGACACGTCCCCGCCGCCAG +
Preference number: 4 (lower is better)
Translates to: SNGDSWLLSHWYRGIHVATRASG*TRPRRQ
Trigger: CTGGCGGCGGGGACGTGTTCATCCAGATGCCCGCGT...GGCTACATGAATTCCCCTATACCAGTGCGAAAGCAGCCAGGAGTCCCCGTTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000257575.9
ENST00000407967.7
CDS-3UTR TCA 90 bp CCGAACTGTTTTCCACTTCCACACCATGGCTGCGGCTGTCCCCTCTTCCTGCCGTGGGCATGGTGGGAGTaGGACCGGCCCTTCGTTTTG +
Preference number: 4 (lower is better)
Translates to: PNCFPLPHHGCGCPLFLPWAWWE*DRPFVL
Trigger: CAAAACGAAGGGCCGGTCTCACTCCCACCATGCCCA...CGGCAGGAAGAGGGGACAGCCGCAGCCATGGTGTGGAAGTGGAAAACAGTTCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000677328.1
CDS-3UTR GCA 90 bp TCCCGATGCACACAGCAATGCCGAGCTTATGCTGAAAGCACAGTTTGGCCAGGATGGTCCCCACCCACGTaGTGCAGCAGGGAGCCCCCG +
Preference number: 4 (lower is better)
Translates to: SRCTQQCRAYAESTVWPGWSPPT*CSREPP
Trigger: CGGGGGCTCCCTGCTGCAGCACGTGGGTGGGGACCA...TCCTGGCCAAACTGTGCTTTCAGCATAAGCTCGGCATTGCTGTGTGCATCGGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000547718.5
CDS-3UTR GCA 90 bp TACCACAGCTGGATGGGGACAAGGGATCGGAACAGCTGGCTCAGCTCCTCGATGCCAGCTTCTGTGCACTaGTGCCCGGTGGCTCGGACT +
Preference number: 4 (lower is better)
Translates to: YHSWMGTRDRNSWLSSSMPASVH*CPVART
Trigger: AGTCCGAGCCACCGGGCAGCAGTGCACAGAAGCTGG...CATCGAGGAGCTGAGCCAGCTGTTCCGATCCCTTGTCCCCATCCAGCTGTGGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547718.5
CDS-3UTR CCA 90 bp GAGAGCCAGGGATGCCAAGCCAAGGGGAAAGTCCTGGTTTGGTGGCACACAGGGTGGAGGGGAACGAGCTaGTGGGGAGGCTGCCTGATA +
Preference number: 4 (lower is better)
Translates to: ESQGCQAKGKVLVWWHTGWRGTS*WGGCLI
Trigger: TATCAGGCAGCCTCCCCACCAGCTCGTTCCCCTCCA...CCCTGTGTGCCACCAAACCAGGACTTTCCCCTTGGCTTGGCATCCCTGGCTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000257575.9
ENST00000392549.7
CDS-3UTR CCA 90 bp TTGGTGGCACACAGGGGCAAATGTCCTGAATCCTTGGCGTCCTTCTGGGTGTCCAGCCCAGCACCAGGCTaGAGGGGAACGAGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: LVAHRGKCPESLASFWVSSPAPG*RGTSWW
Trigger: CCACCAGCTCGTTCCCCTCCAGCCTGGTGCTGGGCT...GGACACCCAGAAGGACGCCAAGGATTCAGGACATTTGCCCCTGTGTGCCACCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392549.7
CDS-3UTR CCA 90 bp TTGGTGGCACACAGGGGCAAATGTCCTGAATCCTTGGCGTCCTTCTGGGTGTCCCCGCCATGGTGGAAATaGTGGTGGGGCTGGCGGTGG +
Preference number: 4 (lower is better)
Translates to: LVAHRGKCPESLASFWVSPPWWK*WWGWRW
Trigger: CCACCGCCAGCCCCACCACCATTTCCACCATGGCGG...GGACACCCAGAAGGACGCCAAGGATTCAGGACATTTGCCCCTGTGTGCCACCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000392549.7
CDS-3UTR CCA 90 bp GTCCTGGTTTGGTGGCACACAGGGGCAAATGTCCTGAATCCTTGGCGTCCTTCTCCGCGGTGGCCGCCATaGTGGAAATGGTGGTGGGGC +
Preference number: 4 (lower is better)
Translates to: VLVWWHTGANVLNPWRPSPRWPP*WKWWWG
Trigger: GCCCCACCACCATTTCCACCATGGCGGCCACCGCGG...AGAAGGACGCCAAGGATTCAGGACATTTGCCCCTGTGTGCCACCAAACCAGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392549.7
CDS-3UTR CCA 90 bp TCCTTTCTGGAGCCAGCAGATCACAGCCTTCAGCTCGGACAGGGCGGGGGCGGGAGTCTTCAAGTTCAATaGCCCCCAGTTCCCCAGAGG +
Preference number: 4 (lower is better)
Translates to: SFLEPADHSLQLGQGGGGSLQVQ*PPVPQR
Trigger: CCTCTGGGGAACTGGGGGCCATTGAACTTGAAGACT...CCCGCCCCCGCCCTGTCCGAGCTGAAGGCTGTGATCTGCTGGCTCCAGAAAGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000547718.5
CDS-3UTR TCA 90 bp GAAAGATGCTACACTGCCCTGGAACAGACGTCTTGCTGGGTACCAGGAGAGAGCTGGGTCCGGGCATGCTaGCCCTTGGCGTCCTTCTGG +
Preference number: 4 (lower is better)
Translates to: ERCYTALEQTSCWVPGESWVRAC*PLASFW
Trigger: CCAGAAGGACGCCAAGGGTCAGCATGCCCGGACCCA...GCTCTCTCCTGGTACCCAGCAAGACGTCTGTTCCAGGGCAGTGTAGCATCTTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257575.9
CDS-3UTR CCA 90 bp TACCACAGCTGGATGGGGACAAGGGATCGGAACAGCTGGCTCAGCTCCTCGATGTGGAGGGGAACGAGCTaGTGGGGAGGCTGCCTGATA +
Preference number: 4 (lower is better)
Translates to: YHSWMGTRDRNSWLSSSMWRGTS*WGGCLI
Trigger: TATCAGGCAGCCTCCCCACCAGCTCGTTCCCCTCCA...CATCGAGGAGCTGAGCCAGCTGTTCCGATCCCTTGTCCCCATCCAGCTGTGGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000547718.5
CDS-3UTR CCA 90 bp TTGGTTCCAGCAGGTAATACACTGGGTTCCGTCACCCTGGAGATGGCTACAGGGAGCCCAGCACCAGGCTaGAGGGGAACGAGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: LVPAGNTLGSVTLEMATGSPAPG*RGTSWW
Trigger: CCACCAGCTCGTTCCCCTCCAGCCTGGTGCTGGGCT...CCCTGTAGCCATCTCCAGGGTGACGGAACCCAGTGTATTACCTGCTGGAACCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257575.9
ENST00000392549.7
ENST00000407967.7
ENST00000547718.5
CDS-3UTR CCA 90 bp TTGGTTCCAGCAGGTAATACACTGGGTTCCGTCACCCTGGAGATGGCTACAGGGCTGGACGCGGGCATCTaGATGAACACGTCCCCGCCG +
Preference number: 4 (lower is better)
Translates to: LVPAGNTLGSVTLEMATGLDAGI*MNTSPP
Trigger: CGGCGGGGACGTGTTCATCCAGATGCCCGCGTCCAG...CCCTGTAGCCATCTCCAGGGTGACGGAACCCAGTGTATTACCTGCTGGAACCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257575.9
ENST00000392549.7
ENST00000407967.7
ENST00000547718.5
CDS-3UTR CCA 90 bp TTGGTTCCAGCAGGTAATACACTGGGTTCCGTCACCCTGGAGATGGCTACAGGGCCGCCATGGTGGAAATaGTGGTGGGGCTGGCGGTGG +
Preference number: 4 (lower is better)
Translates to: LVPAGNTLGSVTLEMATGPPWWK*WWGWRW
Trigger: CCACCGCCAGCCCCACCACCATTTCCACCATGGCGG...CCCTGTAGCCATCTCCAGGGTGACGGAACCCAGTGTATTACCTGCTGGAACCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257575.9
ENST00000392549.7
ENST00000407967.7
ENST00000547718.5
CDS-3UTR CCA 90 bp GAAAGATGCTACACTGCCCTGGAACAGACGTCTTGCTGGGTACCAGGAGAGAGCCGGTGGCCGCCATGGTaGAAATGGTGGTGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: ERCYTALEQTSCWVPGESRWPPW*KWWWGW
Trigger: CCAGCCCCACCACCATTTCCACCATGGCGGCCACCG...GCTCTCTCCTGGTACCCAGCAAGACGTCTGTTCCAGGGCAGTGTAGCATCTTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257575.9
ENST00000392549.7
CDS-3UTR CCA 90 bp GCTGCCTCTGCCTTCAGACTCTCAAAGACGCCACCTTCATCCACACTCGCCTCGTGGGTTCCGTCACCCTaGAGATGGCTACAGGGAGGC +
Preference number: 4 (lower is better)
Translates to: AASAFRLSKTPPSSTLASWVPSP*RWLQGG
Trigger: GCCTCCCTGTAGCCATCTCCAGGGTGACGGAACCCA...CGAGGCGAGTGTGGATGAAGGTGGCGTCTTTGAGAGTCTGAAGGCAGAGGCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547718.5
CDS-3UTR CCA 90 bp CCCTCTTCCTGCCGTGCCCTTGTGGCTTTGCGATGCCTGGGTAACTCCCAGCCCCCTACCCTGAGCCACTaGGCAGATTCTTATTCTGCC +
Preference number: 4 (lower is better)
Translates to: PSSCRALVALRCLGNSQPPTLSH*ADSYSA
Trigger: GGCAGAATAAGAATCTGCCCAGTGGCTCAGGGTAGG...GGGCTGGGAGTTACCCAGGCATCGCAAAGCCACAAGGGCACGGCAGGAAGAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000677328.1
CDS-3UTR TCA 90 bp CCGAACTGTTTTCCACTTCCACACCATGGCTGCGGCTGTCCCCTCTTCCTGCCGCTCACTCACCTACCCTaGGCCACTGGGCAGATTCTT +
Preference number: 4 (lower is better)
Translates to: PNCFPLPHHGCGCPLFLPLTHLP*ATGQIL
Trigger: AAGAATCTGCCCAGTGGCTCAGGGTAGGTGAGTGAG...CGGCAGGAAGAGGGGACAGCCGCAGCCATGGTGTGGAAGTGGAAAACAGTTCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677328.1
CDS-3UTR GCA 90 bp TGGAGAAGTGGCTCTGTCATAGAGATCACAGAAGCACAGATGGTTACGGTGCTCTGGTCCCCACCCACGTaGTGCAGCAGGGAGCCCCCG +
Preference number: 4 (lower is better)
Translates to: WRSGSVIEITEAQMVTVLWSPPT*CSREPP
Trigger: CGGGGGCTCCCTGCTGCAGCACGTGGGTGGGGACCA...GAGCACCGTAACCATCTGTGCTTCTGTGATCTCTATGACAGAGCCACTTCTCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000257575.9
CDS-3UTR GCA 90 bp GCTGCCTCTGCCTTCAGACTCTCAAAGACGCCACCTTCATCCACACTCGCCTCGTGGCATAGGCGAAGGTaGTGGCCATCCCGATGCACA +
Preference number: 4 (lower is better)
Translates to: AASAFRLSKTPPSSTLASWHRRR*WPSRCT
Trigger: TGTGCATCGGGATGGCCAGCACCTTCGCCTATGCCA...CGAGGCGAGTGTGGATGAAGGTGGCGTCTTTGAGAGTCTGAAGGCAGAGGCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547718.5
CDS-3UTR GCA 90 bp ATGCCAAGCCAAGGGGAAAGTCCTGGTTTGGTGGCACACAGGGGCAAATGTCCTCCAGCTTCTGTGCACTaGTGCCCGGTGGCTCGGACT +
Preference number: 4 (lower is better)
Translates to: MPSQGESPGLVAHRGKCPPASVH*CPVART
Trigger: AGTCCGAGCCACCGGGCAGCAGTGCACAGAAGCTGG...AGGACATTTGCCCCTGTGTGCCACCAAACCAGGACTTTCCCCTTGGCTTGGCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257575.9
ENST00000392549.7
CDS-3UTR GCA 90 bp GAGAGCCAGGGATGCCAAGCCAAGGGGAAAGTCCTGGTTTGGTGGCACACAGGGCTGGAACAGACGTCTTaGTGGGTACCAGGAGAGAGC +
Preference number: 4 (lower is better)
Translates to: ESQGCQAKGKVLVWWHTGLEQTS*WVPGES
Trigger: GCTCTCTCCTGGTACCCAGCAAGACGTCTGTTCCAG...CCCTGTGTGCCACCAAACCAGGACTTTCCCCTTGGCTTGGCATCCCTGGCTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257575.9
ENST00000392549.7
CDS-3UTR CCA 90 bp TACCACAGCTGGATGGGGACAAGGGATCGGAACAGCTGGCTCAGCTCCTCGATGGGGGGATGTGACCAATaGATCCCAGAGAGGACAGGC +
Preference number: 4 (lower is better)
Translates to: YHSWMGTRDRNSWLSSSMGGCDQ*IPERTG
Trigger: GCCTGTCCTCTCTGGGATCCATTGGTCACATCCCCC...CATCGAGGAGCTGAGCCAGCTGTTCCGATCCCTTGTCCCCATCCAGCTGTGGTA
59% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000547718.5
CDS-3UTR CCA 90 bp CACGTCCACAGATGTCGAAGGACTTGCAGAGGCTGTAGAGAACGATCAGGACCCCGAGAAGAGCGCTGGTaGGGAGGCTGCCTCTGCCTT +
Preference number: 4 (lower is better)
Translates to: HVHRCRRTCRGCRERSGPREERW*GGCLCL
Trigger: AAGGCAGAGGCAGCCTCCCCACCAGCGCTCTTCTCG...GGGTCCTGATCGTTCTCTACAGCCTCTGCAAGTCCTTCGACATCTGTGGACGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547718.5
CDS-3UTR CCA 90 bp CCGAGTCTCAGCAGCCCGGATGTCTTCCTAACACTCTGCACATCATTCTTCTCTGCCCGAGAAGAGCGCTaGTGGGGAGGCTGCCTCTGC +
Preference number: 4 (lower is better)
Translates to: PSLSSPDVFLTLCTSFFSAREER*WGGCLC
Trigger: GCAGAGGCAGCCTCCCCACCAGCGCTCTTCTCGGGC...AGAGAAGAATGATGTGCAGAGTGTTAGGAAGACATCCGGGCTGCTGAGACTCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257575.9
ENST00000407967.7
CDS-3UTR CCA 90 bp GTCGTCACCCATGATGTATTTGTACCACAGCTGGATGGGGACAAGGGATCGGAAGCCCGAGAAGAGCGCTaGTGGGGAGGCTGCCTCTGC +
Preference number: 4 (lower is better)
Translates to: VVTHDVFVPQLDGDKGSEAREER*WGGCLC
Trigger: GCAGAGGCAGCCTCCCCACCAGCGCTCTTCTCGGGC...TTCCGATCCCTTGTCCCCATCCAGCTGTGGTACAAATACATCATGGGTGACGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547718.5
CDS-3UTR CCA 90 bp CACAGGGCTGTTGTGAGGATGACAGCACGTAATCCAAGCAGGATGCTGCATGCTCTGGACGCGGGCATCTaGATGAACACGTCCCCGCCG +
Preference number: 4 (lower is better)
Translates to: HRAVVRMTARNPSRMLHALDAGI*MNTSPP
Trigger: CGGCGGGGACGTGTTCATCCAGATGCCCGCGTCCAG...AGCATGCAGCATCCTGCTTGGATTACGTGCTGTCATCCTCACAACAGCCCTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257575.9
CDS-3UTR CCA 90 bp CTGCGATCCCCACAATCCATAGCAGGTCAAAGAAGTCCAGCATCTCCAGGTTGGCCGCCATGGTGGAAATaGTGGTGGGGCTGGCGGTGG +
Preference number: 4 (lower is better)
Translates to: LRSPQSIAGQRSPASPGWPPWWK*WWGWRW
Trigger: CCACCGCCAGCCCCACCACCATTTCCACCATGGCGG...CCAACCTGGAGATGCTGGACTTCTTTGACCTGCTATGGATTGTGGGGATCGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547718.5
CDS-3UTR CCA 90 bp GAGAGTGGCATTGTTCTTTTCCAACGGGGACTCCTGGCTGCTTTCGCACTGGTACGGTGGCCGCCATGGTaGAAATGGTGGTGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: ESGIVLFQRGLLAAFALVRWPPW*KWWWGW
Trigger: CCAGCCCCACCACCATTTCCACCATGGCGGCCACCG...TACCAGTGCGAAAGCAGCCAGGAGTCCCCGTTGGAAAAGAACAATGCCACTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000257575.9
ENST00000407967.7
CDS-3UTR CCA 90 bp CCTCTCTTTCTTCTAATCCCGAGTCTCAGCAGCCCGGATGTCTTCCTAACACTCCCGCGGTGGCCGCCATaGTGGAAATGGTGGTGGGGC +
Preference number: 4 (lower is better)
Translates to: PLFLLIPSLSSPDVFLTLPRWPP*WKWWWG
Trigger: GCCCCACCACCATTTCCACCATGGCGGCCACCGCGG...GAGTGTTAGGAAGACATCCGGGCTGCTGAGACTCGGGATTAGAAGAAAGAGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257575.9
ENST00000407967.7
CDS-3UTR CCA 90 bp CAGCTTCTGTGCACTGCTGCCCGGTGGCTCGGACTCCATAGTTCTGAGAGGTACCATAGGCGAAGGTGCTaGCCATCCCGATGCACACAG +
Preference number: 4 (lower is better)
Translates to: QLLCTAARWLGLHSSERYHRRRC*PSRCTQ
Trigger: CTGTGTGCATCGGGATGGCCAGCACCTTCGCCTATG...GTACCTCTCAGAACTATGGAGTCCGAGCCACCGGGCAGCAGTGCACAGAAGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547718.5
CDS-3UTR CCA 90 bp AGAGAGCCAGGGATGCCAAGCCAAGGGGAAAGTCCTGGTTTGGTGGCACACAGGAGGGATCGGAACAGCTaGCTCAGCTCCTCGATGACC +
Preference number: 4 (lower is better)
Translates to: REPGMPSQGESPGLVAHRRDRNS*LSSSMT
Trigger: GGTCATCGAGGAGCTGAGCCAGCTGTTCCGATCCCT...CCTGTGTGCCACCAAACCAGGACTTTCCCCTTGGCTTGGCATCCCTGGCTCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257575.9
ENST00000392549.7
CDS-3UTR CCA 90 bp ACAGATGGCGCAGATGTCACCAGCTTCTGTGCACTGCTGCCCGGTGGCTCGGACTGTACCACAGCTGGATaGGGACAAGGGATCGGAACA +
Preference number: 4 (lower is better)
Translates to: TDGADVTSFCALLPGGSDCTTAG*GQGIGT
Trigger: TGTTCCGATCCCTTGTCCCCATCCAGCTGTGGTACA...GTCCGAGCCACCGGGCAGCAGTGCACAGAAGCTGGTGACATCTGCGCCATCTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547718.5
CDS-3UTR CCA 90 bp GAGAGTGGCATTGTTCTTTTCCAACGGGGACTCCTGGCTGCTTTCGCACTGGTAGGAAGTGTGCGGACGTaGCGCCGTCCTTCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: ESGIVLFQRGLLAAFALVGSVRT*RRPSSS
Trigger: GCTGCTGGAAGGACGGCGCCACGTCCGCACACTTCC...TACCAGTGCGAAAGCAGCCAGGAGTCCCCGTTGGAAAAGAACAATGCCACTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257575.9
CDS-3UTR TCA 90 bp ACAGATGGCGCAGATGTCACCAGCTTCTGTGCACTGCTGCCCGGTGGCTCGGACTGGGCTTCAGGAATATaGGGCTGTTGTACAGCTGCT +
Preference number: 4 (lower is better)
Translates to: TDGADVTSFCALLPGGSDWASGI*GCCTAA
Trigger: AGCAGCTGTACAACAGCCTCATATTCCTGAAGCCCA...GTCCGAGCCACCGGGCAGCAGTGCACAGAAGCTGGTGACATCTGCGCCATCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547718.5
CDS-3UTR GCA 90 bp GAGCTTGAAAGATGCTACACTGCCCTGGAACAGACGTCTTGCTGGGTACCAGGACGCTGGTGGGGAGGCTaGCTCTGCCTTCAGACTCTC +
Preference number: 4 (lower is better)
Translates to: ELERCYTALEQTSCWVPGRWWGG*LCLQTL
Trigger: GAGAGTCTGAAGGCAGAGGCAGCCTCCCCACCAGCG...TCCTGGTACCCAGCAAGACGTCTGTTCCAGGGCAGTGTAGCATCTTTCAAGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257575.9
ENST00000392549.7
CDS-3UTR GCA 90 bp TGTGCCCCTTCAACAGCATCTGCAGGCAGGATGATCTTTCCGATAAAAACCAGTTGGTCCCCACCCACGTaGTGCAGCAGGGAGCCCCCG +
Preference number: 4 (lower is better)
Translates to: CAPSTASAGRMIFPIKTSWSPPT*CSREPP
Trigger: CGGGGGCTCCCTGCTGCAGCACGTGGGTGGGGACCA...ACTGGTTTTTATCGGAAAGATCATCCTGCCTGCAGATGCTGTTGAAGGGGCACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000257575.9
ENST00000392549.7
CDS-3UTR GCA 90 bp GATTATTCAGGCAAGTGGGATTGTAACATCATGGCCATCGCCATAGTAACGGAGCCTCCCTCCTCCGAGTaGCCCCGGTGGTCCCCACCC +
Preference number: 4 (lower is better)
Translates to: DYSGKWDCNIMAIAIVTEPPSSE*PRWSPP
Trigger: GGGTGGGGACCACCGGGGGCACTCGGAGGAGGGAGG...CTCCGTTACTATGGCGATGGCCATGATGTTACAATCCCACTTGCCTGAATAATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257575.9
ENST00000392549.7
CDS-3UTR GCA 90 bp AGGGGCAAATGTCCTGAATCCTTGGCGTCCTTCTGGGTGTCCTCAGTGTTCGGTGTACACCTGGAAGTGTaGGGACGTGGCGCCGTCCTT +
Preference number: 4 (lower is better)
Translates to: RGKCPESLASFWVSSVFGVHLEV*GRGAVL
Trigger: AAGGACGGCGCCACGTCCGCACACTTCCAGGTGTAC...ACCGAACACTGAGGACACCCAGAAGGACGCCAAGGATTCAGGACATTTGCCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392549.7
CDS-3UTR GCA 90 bp CCCTCTTCCTGCCGTGCCCTTGTGGCTTTGCGATGCCTGGGTAACTCCCAGCCCACTTCCCTGACAACCTaGATGACTCAGCAGAAGCAA +
Preference number: 4 (lower is better)
Translates to: PSSCRALVALRCLGNSQPTSLTT*MTQQKQ
Trigger: TTGCTTCTGCTGAGTCATGCAGGTTGTCAGGGAAGT...GGGCTGGGAGTTACCCAGGCATCGCAAAGCCACAAGGGCACGGCAGGAAGAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677328.1
CDS-3UTR CCA 90 bp TTACCTCTCTTTCTTCTAATCCCGAGTCTCAGCAGCCCGGATGTCTTCCTAACATCCGAGTGCCCCCGGTaGTCCCCACCCACGTGCTGC +
Preference number: 4 (lower is better)
Translates to: LPLFLLIPSLSSPDVFLTSECPR*SPPTCC
Trigger: GCAGCACGTGGGTGGGGACCACCGGGGGCACTCGGA...TGTTAGGAAGACATCCGGGCTGCTGAGACTCGGGATTAGAAGAAAGAGAGGTAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257575.9
ENST00000407967.7
CDS-3UTR CCA 90 bp TCTGGCACAGGAGAATCAGAGGCTCTCGGAACTCGGCCTGACAGATGGCGCAGACCTGTTCTCGAAGCGTaGAGTTGGCATAGGCGAAGG +
Preference number: 4 (lower is better)
Translates to: SGTGESEALGTRPDRWRRPVLEA*SWHRRR
Trigger: CCTTCGCCTATGCCAACTCCACGCTTCGAGAACAGG...TCTGCGCCATCTGTCAGGCCGAGTTCCGAGAGCCTCTGATTCTCCTGTGCCAGA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547718.5
CDS-3UTR CCA 90 bp AGGCGAAGGTGCTGGCCATCCCGATGCACACAGCAATGCCGAGCTTATGCTGAAAGGGATCGGAACAGCTaGCTCAGCTCCTCGATGACC +
Preference number: 4 (lower is better)
Translates to: RRRCWPSRCTQQCRAYAERDRNS*LSSSMT
Trigger: GGTCATCGAGGAGCTGAGCCAGCTGTTCCGATCCCT...TTCAGCATAAGCTCGGCATTGCTGTGTGCATCGGGATGGCCAGCACCTTCGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547718.5
CDS-3UTR CCA 90 bp TACCACAGCTGGATGGGGACAAGGGATCGGAACAGCTGGCTCAGCTCCTCGATGACTCGGCCTGACAGATaGCGCAGATGTCACCAGCTT +
Preference number: 4 (lower is better)
Translates to: YHSWMGTRDRNSWLSSSMTRPDR*RRCHQL
Trigger: AAGCTGGTGACATCTGCGCCATCTGTCAGGCCGAGT...CATCGAGGAGCTGAGCCAGCTGTTCCGATCCCTTGTCCCCATCCAGCTGTGGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547718.5
CDS-3UTR CCA 90 bp GTCCCCGCCGCCAGCCGAGGAGCCCAGCACCAGGCTGGAGGGGAACGAGCTGGTTTTGTTTTATTGTTTTaGTGGCATGGGCATAATTGG +
Preference number: 4 (lower is better)
Translates to: VPAASRGAQHQAGGERAGFVLLF*WHGHNW
Trigger: CCAATTATGCCCATGCCACCAAAACAATAAAACAAA...ACCAGCTCGTTCCCCTCCAGCCTGGTGCTGGGCTCCTCGGCTGGCGGCGGGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 1 transcripts:
ENST00000547718.5
CDS-3UTR CCA 90 bp CGATCCCCACAATCCATAGCAGGTCAAAGAAGTCCAGCATCTCCAGGTTGGGCTTCGGAGCTGAGCGCCTaGCTGCGGTTTCTCGGGATC +
Preference number: 4 (lower is better)
Translates to: RSPQSIAGQRSPASPGWASELSA*LRFLGI
Trigger: GATCCCGAGAAACCGCAGCCAGGCGCTCAGCTCCGA...AGCCCAACCTGGAGATGCTGGACTTCTTTGACCTGCTATGGATTGTGGGGATCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547718.5
CDS-3UTR CCA 90 bp GCCCTTGTGGCTTTGCGATGCCTGGGTAACTCCCAGCCCTGCTTTAAAACTCAGGTTTTGCAGGGGAGCTaGGTGAGGCCTGTGACTGCC +
Preference number: 4 (lower is better)
Translates to: ALVALRCLGNSQPCFKTQVLQGS*VRPVTA
Trigger: GGCAGTCACAGGCCTCACCCAGCTCCCCTGCAAAAC...CTGAGTTTTAAAGCAGGGCTGGGAGTTACCCAGGCATCGCAAAGCCACAAGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000677328.1
CDS-3UTR CCA 90 bp GAGAGTCACTCACTCACCTACCCTGAGCCACTGGGCAGATTCTTATTCTGCCCCGGGAGGCGGATAGTCTaGGGCAGGTTTTCAAGCCCC +
Preference number: 4 (lower is better)
Translates to: ESHSLTYPEPLGRFLFCPGRRIV*GRFSSP
Trigger: GGGGCTTGAAAACCTGCCCCAGACTATCCGCCTCCC...GGGGCAGAATAAGAATCTGCCCAGTGGCTCAGGGTAGGTGAGTGAGTGACTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677328.1
CDS-3UTR TCA 90 bp CCCTTCAACAGCATCTGCAGGCAGGATGATCTTTCCGATAAAAACCAGTTGCAGCACTCGCCTCGGAGCTaGGCGCCTGGCTGCGGTTTC +
Preference number: 4 (lower is better)
Translates to: PFNSICRQDDLSDKNQLQHSPRS*APGCGF
Trigger: GAAACCGCAGCCAGGCGCTCAGCTCCGAGGCGAGTG...CTGCAACTGGTTTTTATCGGAAAGATCATCCTGCCTGCAGATGCTGTTGAAGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257575.9
ENST00000392549.7
CDS-3UTR TCA 90 bp GAAGCGTGGAGTTGGCATAGGCGAAGGTGCTGGCCATCCCGATGCACACAGCAACCAGGATCCACAAGATaGCCAGCACTGACCTCTTCT +
Preference number: 4 (lower is better)
Translates to: EAWSWHRRRCWPSRCTQQPGSTR*PALTSS
Trigger: AGAAGAGGTCAGTGCTGGTCATCTTGTGGATCCTGG...TTGCTGTGTGCATCGGGATGGCCAGCACCTTCGCCTATGCCAACTCCACGCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547718.5
CDS-3UTR TCA 90 bp ATCTTGGGCAGGGCCACGATGAGGCACTTGAGGGCGATGGTGATGTACTTCAGATCTCGGAACTCGGCCTaGCAGATGGCGCAGATGTCA +
Preference number: 4 (lower is better)
Translates to: ILGRATMRHLRAMVMYFRSRNSA*QMAQMS
Trigger: TGACATCTGCGCCATCTGTCAGGCCGAGTTCCGAGA...TCTGAAGTACATCACCATCGCCCTCAAGTGCCTCATCGTGGCCCTGCCCAAGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547718.5
CDS-3UTR GCA 90 bp TTGTGCCCCTTCAACAGCATCTGGCACAGGAGAATCAGAGGCTCTCGGAACTCGAGCTGGTGGGGAGGCTaGCTGATAAGCCCGAGAAGA +
Preference number: 4 (lower is better)
Translates to: LCPFNSIWHRRIRGSRNSSWWGG*LISPRR
Trigger: TCTTCTCGGGCTTATCAGGCAGCCTCCCCACCAGCT...CGAGTTCCGAGAGCCTCTGATTCTCCTGTGCCAGATGCTGTTGAAGGGGCACAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547718.5
CDS-3UTR GCA 90 bp ACTTTCATCAATCTTCTCCAGCTCCAATTTCTTGTGCCCCTTCAACAGCATCTGGCGGGCGTCCCAGGCTaGTCGTCGCCTCCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: TFINLLQLQFLVPLQQHLAGVPG*SSPPSS
Trigger: GGAGGAGGGAGGCGACGAGCAGCCTGGGACGCCCGC...CAGATGCTGTTGAAGGGGCACAAGAAATTGGAGCTGGAGAAGATTGATGAAAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257575.9
ENST00000392549.7
ENST00000547718.5
CDS-3UTR GCA 90 bp AAGAAAACCTCAGATGGGACGTTCCCCCAGAGGGTAGGGCATGCACTAATAAAAGGCAGAGCGGGCAGGTaGGCTCACGGTCCAGCCACA +
Preference number: 4 (lower is better)
Translates to: KKTSDGTFPQRVGHALIKGRAGR*AHGPAT
Trigger: TGTGGCTGGACCGTGAGCGCACCTGCCCGCTCTGCC...TTTTATTAGTGCATGCCCTACCCTCTGGGGGAACGTCCCATCTGAGGTTTTCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000257575.9
CDS-3UTR GCA 90 bp ACAGATGGCGCAGATGTCACCAGCTTCTGTGCACTGCTGCCCGGTGGCTCGGACAGCTCCAATTTCTTGTaGCCCTTCAACAGCATCTGG +
Preference number: 4 (lower is better)
Translates to: TDGADVTSFCALLPGGSDSSNFL*PFNSIW
Trigger: CCAGATGCTGTTGAAGGGGCACAAGAAATTGGAGCT...GTCCGAGCCACCGGGCAGCAGTGCACAGAAGCTGGTGACATCTGCGCCATCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547718.5
CDS-3UTR CCA 90 bp ATGCCAAGCCAAGGGGAAAGTCCTGGTTTGGTGGCACACAGGGGCAAATGTCCTGGGGGATGTGACCAATaGATCCCAGAGAGGACAGGC +
Preference number: 4 (lower is better)
Translates to: MPSQGESPGLVAHRGKCPGGCDQ*IPERTG
Trigger: GCCTGTCCTCTCTGGGATCCATTGGTCACATCCCCC...AGGACATTTGCCCCTGTGTGCCACCAAACCAGGACTTTCCCCTTGGCTTGGCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000257575.9
ENST00000392549.7
CDS-3UTR CCA 90 bp TTGGTTCCAGCAGGTAATACACTGGGTTCCGTCACCCTGGAGATGGCTACAGGGGGGGGATGTGACCAATaGATCCCAGAGAGGACAGGC +
Preference number: 4 (lower is better)
Translates to: LVPAGNTLGSVTLEMATGGGCDQ*IPERTG
Trigger: GCCTGTCCTCTCTGGGATCCATTGGTCACATCCCCC...CCCTGTAGCCATCTCCAGGGTGACGGAACCCAGTGTATTACCTGCTGGAACCAA
57% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257575.9
ENST00000392549.7
ENST00000407967.7
ENST00000547718.5
CDS-3UTR CCA 90 bp TGGAGAAGTGGCTCTGTCATAGAGATCACAGAAGCACAGATGGTTACGGTGCTCCGGTGGCCGCCATGGTaGAAATGGTGGTGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: WRSGSVIEITEAQMVTVLRWPPW*KWWWGW
Trigger: CCAGCCCCACCACCATTTCCACCATGGCGGCCACCG...GAGCACCGTAACCATCTGTGCTTCTGTGATCTCTATGACAGAGCCACTTCTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257575.9
CDS-3UTR CCA 90 bp CCCTTCAACAGCATCTGCAGGCAGGATGATCTTTCCGATAAAAACCAGTTGCAGAGGGAGCCCCCGCGGTaGCCGCCATGGTGGAAATGG +
Preference number: 4 (lower is better)
Translates to: PFNSICRQDDLSDKNQLQREPPR*PPWWKW
Trigger: CCATTTCCACCATGGCGGCCACCGCGGGGGCTCCCT...CTGCAACTGGTTTTTATCGGAAAGATCATCCTGCCTGCAGATGCTGTTGAAGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000257575.9
ENST00000392549.7
CDS-3UTR CCA 90 bp TTACCTCTCTTTCTTCTAATCCCGAGTCTCAGCAGCCCGGATGTCTTCCTAACAAGGGAGCCCCCGCGGTaGCCGCCATGGTGGAAATGG +
Preference number: 4 (lower is better)
Translates to: LPLFLLIPSLSSPDVFLTREPPR*PPWWKW
Trigger: CCATTTCCACCATGGCGGCCACCGCGGGGGCTCCCT...TGTTAGGAAGACATCCGGGCTGCTGAGACTCGGGATTAGAAGAAAGAGAGGTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257575.9
ENST00000407967.7
CDS-3UTR CCA 90 bp TCCAACGGGGACTCCTGGCTGCTTTCGCACTGGTATAGGGGAATTCATGTAGCCCTCGAAGCGTGGAGTTaGCATAGGCGAAGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: SNGDSWLLSHWYRGIHVALEAWS*HRRRCW
Trigger: CCAGCACCTTCGCCTATGCCAACTCCACGCTTCGAG...GGCTACATGAATTCCCCTATACCAGTGCGAAAGCAGCCAGGAGTCCCCGTTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257575.9
ENST00000407967.7
CDS-3UTR CCA 90 bp AGCCAAGGGGAAAGTCCTGGTTTGGTGGCACACAGGGGCAAATGTCCTGAATCCAGGGATCGGAACAGCTaGCTCAGCTCCTCGATGACC +
Preference number: 4 (lower is better)
Translates to: SQGESPGLVAHRGKCPESRDRNS*LSSSMT
Trigger: GGTCATCGAGGAGCTGAGCCAGCTGTTCCGATCCCT...GGATTCAGGACATTTGCCCCTGTGTGCCACCAAACCAGGACTTTCCCCTTGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392549.7
CDS-3UTR CCA 90 bp TTGGTTCCAGCAGGTAATACACTGGGTTCCGTCACCCTGGAGATGGCTACAGGGTGCACTGCTGCCCGGTaGCTCGGACTCCATAGTTCT +
Preference number: 4 (lower is better)
Translates to: LVPAGNTLGSVTLEMATGCTAAR*LGLHSS
Trigger: AGAACTATGGAGTCCGAGCCACCGGGCAGCAGTGCA...CCCTGTAGCCATCTCCAGGGTGACGGAACCCAGTGTATTACCTGCTGGAACCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257575.9
ENST00000392549.7
ENST00000407967.7
ENST00000547718.5
CDS-3UTR CCA 90 bp GAAAGATGCTACACTGCCCTGGAACAGACGTCTTGCTGGGTACCAGGAGAGAGCCCAAGGGGAAAGTCCTaGTTTGGTGGCACACAGGGG +
Preference number: 4 (lower is better)
Translates to: ERCYTALEQTSCWVPGESPRGKS*FGGTQG
Trigger: CCCCTGTGTGCCACCAAACCAGGACTTTCCCCTTGG...GCTCTCTCCTGGTACCCAGCAAGACGTCTGTTCCAGGGCAGTGTAGCATCTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257575.9
ENST00000392549.7
CDS-3UTR CCA 90 bp TTTGAGAGTCACTCACTCACCTACCCTGAGCCACTGGGCAGATTCTTATTCTGCGCCCTGGGAGCTCACTaGGTCCCCCAGCAGCCCATT +
Preference number: 4 (lower is better)
Translates to: FESHSLTYPEPLGRFLFCALGAH*VPQQPI
Trigger: AATGGGCTGCTGGGGGACCCAGTGAGCTCCCAGGGC...GCAGAATAAGAATCTGCCCAGTGGCTCAGGGTAGGTGAGTGAGTGACTCTCAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000677328.1
CDS-3UTR CCA 90 bp CCCGAACTGTTTTCCACTTCCACACCATGGCTGCGGCTGTCCCCTCTTCCTGCCGAGCTTAGAGTCTGGTaGGAATGGGATGTTCAGGAG +
Preference number: 4 (lower is better)
Translates to: PELFSTSTPWLRLSPLPAELRVW*EWDVQE
Trigger: CTCCTGAACATCCCATTCCCACCAGACTCTAAGCTC...GGCAGGAAGAGGGGACAGCCGCAGCCATGGTGTGGAAGTGGAAAACAGTTCGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677328.1
3UTR CAA 72 bp GAGCCAGGGATGCCAAGCCAAGGGGAAAGTCCTGGTTaGGTGGCACACAGGGGCAAATGTCCTGAATCTACG +
Preference number: 4 (lower is better)
Translates to: EPGMPSQGESPG*VAHRGKCPEST
Trigger: CGTAGATTCAGGACATTTGCCCCTGTGTGCCACCAAACCAGGACTTTCCCCTTGGCTTGGCATCCCTGGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257575.9
3UTR CAA 72 bp GAGCCAGGGATGCCAAGCCAAGGGGAAAGTCCTGGTTaGGTGGCACACAGGGGCAAATGTCCTGAATCCTTG +
Preference number: 4 (lower is better)
Translates to: EPGMPSQGESPG*VAHRGKCPESL
Trigger: CAAGGATTCAGGACATTTGCCCCTGTGTGCCACCAAACCAGGACTTTCCCCTTGGCTTGGCATCCCTGGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392549.7
CDS-3UTR TCA 90 bp CATTCTTCTCTTCCGAAGCTGATGCACCTATCATATCTGTGTCCAAAGCTTGCCCACTCGCCTCGGAGCTaGGCGCCTGGCTGCGGTTTC +
Preference number: 4 (lower is better)
Translates to: HSSLPKLMHLSYLCPKLAHSPRS*APGCGF
Trigger: GAAACCGCAGCCAGGCGCTCAGCTCCGAGGCGAGTG...GGCAAGCTTTGGACACAGATATGATAGGTGCATCAGCTTCGGAAGAGAAGAATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257575.9
ENST00000407967.7
CDS-3UTR GCA 90 bp GAAGCGTGGAGTTGGCATAGGCGAAGGTGCTGGCCATCCCGATGCACACAGCAATGTTATCCGTGTTGCTaGTGTGGCGTCTCTGCATCT +
Preference number: 4 (lower is better)
Translates to: EAWSWHRRRCWPSRCTQQCYPCC*CGVSAS
Trigger: AGATGCAGAGACGCCACAGCAGCAACACGGATAACA...TTGCTGTGTGCATCGGGATGGCCAGCACCTTCGCCTATGCCAACTCCACGCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547718.5
CDS-3UTR GCA 90 bp GGTACAGAGAAGCTTCAGGGCTTTCCTAACTCCGCCCACACGTCCACAGATGTCTGGGGAGGCTGCCTCTaGCTTCAGACTCTCAAAGAC +
Preference number: 4 (lower is better)
Translates to: GTEKLQGFPNSAHTSTDVWGGCL*LQTLKD
Trigger: GTCTTTGAGAGTCTGAAGGCAGAGGCAGCCTCCCCA...GACATCTGTGGACGTGTGGGCGGAGTTAGGAAAGCCCTGAAGCTTCTCTGTACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547718.5
CDS-3UTR GCA 90 bp TTCTCTTCCGAAGCTGATGCACCTATCATATCTGTGTCCAAAGCTTGCCTTTCTTGGTCCCCACCCACGTaGTGCAGCAGGGAGCCCCCG +
Preference number: 4 (lower is better)
Translates to: FSSEADAPIISVSKACLSWSPPT*CSREPP
Trigger: CGGGGGCTCCCTGCTGCAGCACGTGGGTGGGGACCA...AGAAAGGCAAGCTTTGGACACAGATATGATAGGTGCATCAGCTTCGGAAGAGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257575.9
ENST00000407967.7
CDS-3UTR GCA 90 bp TACCACAGCTGGATGGGGACAAGGGATCGGAACAGCTGGCTCAGCTCCTCGATGCGATGCACACAGCAATaGCGAGCTTATGCTGAAAGC +
Preference number: 4 (lower is better)
Translates to: YHSWMGTRDRNSWLSSSMRCTQQ*RAYAES
Trigger: GCTTTCAGCATAAGCTCGGCATTGCTGTGTGCATCG...CATCGAGGAGCTGAGCCAGCTGTTCCGATCCCTTGTCCCCATCCAGCTGTGGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547718.5
CDS-3UTR GCA 90 bp AGCATCTGCAGGCAGGATGATCTTTCCGATAAAAACCAGTTGCAGAAGTTCCTGGGCAGAGCGGGCAGGTaGGCTCACGGTCCAGCCACA +
Preference number: 4 (lower is better)
Translates to: SICRQDDLSDKNQLQKFLGRAGR*AHGPAT
Trigger: TGTGGCTGGACCGTGAGCGCACCTGCCCGCTCTGCC...CAGGAACTTCTGCAACTGGTTTTTATCGGAAAGATCATCCTGCCTGCAGATGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257575.9
ENST00000392549.7
CDS-3UTR GCA 90 bp GAGAAGTGGCTCTGTCATAGAGATCACAGAAGCACAGATGGTTACGGTGCTCCAGTCTGCTGGGCCCCATaGCTGGAATGTCTGAGGGGC +
Preference number: 4 (lower is better)
Translates to: EKWLCHRDHRSTDGYGAPVCWAP*LECLRG
Trigger: GCCCCTCAGACATTCCAGGCATGGGGCCCAGCAGAC...TGGAGCACCGTAACCATCTGTGCTTCTGTGATCTCTATGACAGAGCCACTTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257575.9
CDS-3UTR GCA 90 bp GAGAGCCAGGGATGCCAAGCCAAGGGGAAAGTCCTGGTTTGGTGGCACACAGGGATAGGTTGTCCTGTTTaGTCTGAAGGCTACCAGAGG +
Preference number: 4 (lower is better)
Translates to: ESQGCQAKGKVLVWWHTGIGCPV*SEGYQR
Trigger: CCTCTGGTAGCCTTCAGAGCAAACAGGACAACCTAT...CCCTGTGTGCCACCAAACCAGGACTTTCCCCTTGGCTTGGCATCCCTGGCTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257575.9
CDS-3UTR GCA 90 bp TTGGTTCCAGCAGGTAATACACTGGGTTCCGTCACCCTGGAGATGGCTACAGGGCTGGAACAGACGTCTTaGTGGGTACCAGGAGAGAGC +
Preference number: 4 (lower is better)
Translates to: LVPAGNTLGSVTLEMATGLEQTS*WVPGES
Trigger: GCTCTCTCCTGGTACCCAGCAAGACGTCTGTTCCAG...CCCTGTAGCCATCTCCAGGGTGACGGAACCCAGTGTATTACCTGCTGGAACCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257575.9
ENST00000392549.7
CDS-3UTR GCA 90 bp TCCAACGGGGACTCCTGGCTGCTTTCGCACTGGTATAGGGGAATTCATGTAGCCCTAAACCATCCCATCTaGCCCTGTGTGTCCCCCACA +
Preference number: 4 (lower is better)
Translates to: SNGDSWLLSHWYRGIHVALNHPI*PCVSPT
Trigger: TGTGGGGGACACACAGGGGCAGATGGGATGGTTTAG...GGCTACATGAATTCCCCTATACCAGTGCGAAAGCAGCCAGGAGTCCCCGTTGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000257575.9
ENST00000407967.7
CDS-3UTR CCA 90 bp AGCCTGTGTTGGAAACACTCCTCATCAGACACTGTTTTCCCTAGGACAGAAGTTGCCCGAGAAGAGCGCTaGTGGGGAGGCTGCCTCTGC +
Preference number: 4 (lower is better)
Translates to: SLCWKHSSSDTVFPRTEVAREER*WGGCLC
Trigger: GCAGAGGCAGCCTCCCCACCAGCGCTCTTCTCGGGC...AACTTCTGTCCTAGGGAAAACAGTGTCTGATGAGGAGTGTTTCCAACACAGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257575.9
ENST00000407967.7
CDS-3UTR CCA 90 bp GAAAGATGCTACACTGCCCTGGAACAGACGTCTTGCTGGGTACCAGGAGAGAGCAAGGGGAGTCCTTTCTaGAGCCAGCAGATCACAGCC +
Preference number: 4 (lower is better)
Translates to: ERCYTALEQTSCWVPGESKGSPF*SQQITA
Trigger: GGCTGTGATCTGCTGGCTCCAGAAAGGACTCCCCTT...GCTCTCTCCTGGTACCCAGCAAGACGTCTGTTCCAGGGCAGTGTAGCATCTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257575.9
ENST00000392549.7
CDS-3UTR CCA 90 bp TTGGTTCCAGCAGGTAATACACTGGGTTCCGTCACCCTGGAGATGGCTACAGGGCCTGTTCTCGAAGCGTaGAGTTGGCATAGGCGAAGG +
Preference number: 4 (lower is better)
Translates to: LVPAGNTLGSVTLEMATGPVLEA*SWHRRR
Trigger: CCTTCGCCTATGCCAACTCCACGCTTCGAGAACAGG...CCCTGTAGCCATCTCCAGGGTGACGGAACCCAGTGTATTACCTGCTGGAACCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257575.9
ENST00000392549.7
ENST00000407967.7
ENST00000547718.5
CDS-3UTR CCA 90 bp CGATCCCCACAATCCATAGCAGGTCAAAGAAGTCCAGCATCTCCAGGTTGGGCTTGCACTGCTGCCCGGTaGCTCGGACTCCATAGTTCT +
Preference number: 4 (lower is better)
Translates to: RSPQSIAGQRSPASPGWACTAAR*LGLHSS
Trigger: AGAACTATGGAGTCCGAGCCACCGGGCAGCAGTGCA...AGCCCAACCTGGAGATGCTGGACTTCTTTGACCTGCTATGGATTGTGGGGATCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547718.5
CDS-3UTR CCA 90 bp TTGGTTCCAGCAGGTAATACACTGGGTTCCGTCACCCTGGAGATGGCTACAGGGACTCGGCCTGACAGATaGCGCAGATGTCACCAGCTT +
Preference number: 4 (lower is better)
Translates to: LVPAGNTLGSVTLEMATGTRPDR*RRCHQL
Trigger: AAGCTGGTGACATCTGCGCCATCTGTCAGGCCGAGT...CCCTGTAGCCATCTCCAGGGTGACGGAACCCAGTGTATTACCTGCTGGAACCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257575.9
ENST00000392549.7
ENST00000407967.7
ENST00000547718.5
CDS-3UTR CCA 90 bp GAAAGATGCTACACTGCCCTGGAACAGACGTCTTGCTGGGTACCAGGAGAGAGCACTCGGCCTGACAGATaGCGCAGATGTCACCAGCTT +
Preference number: 4 (lower is better)
Translates to: ERCYTALEQTSCWVPGESTRPDR*RRCHQL
Trigger: AAGCTGGTGACATCTGCGCCATCTGTCAGGCCGAGT...GCTCTCTCCTGGTACCCAGCAAGACGTCTGTTCCAGGGCAGTGTAGCATCTTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257575.9
ENST00000392549.7
CDS-3UTR CCA 90 bp CTACACTGCCCTGGAACAGACGTCTTGCTGGGTACCAGGAGAGAGCCAGGGATGAGGGGTAACCACATCTaGGCCAAAGCTGACCTTTCT +
Preference number: 4 (lower is better)
Translates to: LHCPGTDVLLGTRREPGMRGNHI*AKADLS
Trigger: AGAAAGGTCAGCTTTGGCCCAGATGTGGTTACCCCT...CATCCCTGGCTCTCTCCTGGTACCCAGCAAGACGTCTGTTCCAGGGCAGTGTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257575.9
CDS-3UTR CCA 90 bp GAGCTTGAAAGATGCTACACTGCCCTGGAACAGACGTCTTGCTGGGTACCAGGAGGCTACCAGAGGGGATaGCAATGTCCACAGGAGCTG +
Preference number: 4 (lower is better)
Translates to: ELERCYTALEQTSCWVPGGYQRG*QCPQEL
Trigger: CAGCTCCTGTGGACATTGCCATCCCCTCTGGTAGCC...TCCTGGTACCCAGCAAGACGTCTGTTCCAGGGCAGTGTAGCATCTTTCAAGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257575.9
CDS-3UTR CCA 90 bp GAAAGATGCTACACTGCCCTGGAACAGACGTCTTGCTGGGTACCAGGAGAGAGCCTGGTGGCTTCTGCGTaGTCACCTGTGCCATCTCAT +
Preference number: 4 (lower is better)
Translates to: ERCYTALEQTSCWVPGESLVASA*SPVPSH
Trigger: ATGAGATGGCACAGGTGACCACGCAGAAGCCACCAG...GCTCTCTCCTGGTACCCAGCAAGACGTCTGTTCCAGGGCAGTGTAGCATCTTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257575.9
CDS-3UTR CCA 90 bp TTGGTTCCAGCAGGTAATACACTGGGTTCCGTCACCCTGGAGATGGCTACAGGGTCCAACGGGGACTCCTaGCTGCTTTCGCACTGGTAT +
Preference number: 4 (lower is better)
Translates to: LVPAGNTLGSVTLEMATGSNGDS*LLSHWY
Trigger: ATACCAGTGCGAAAGCAGCCAGGAGTCCCCGTTGGA...CCCTGTAGCCATCTCCAGGGTGACGGAACCCAGTGTATTACCTGCTGGAACCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257575.9
ENST00000407967.7
CDS-3UTR CCA 90 bp CCCTCTTCCTGCCGTGCCCTTGTGGCTTTGCGATGCCTGGGTAACTCCCAGCCCGGCGCTGAGTCAATTTaGAAAGCCAAGCAAAATACA +
Preference number: 4 (lower is better)
Translates to: PSSCRALVALRCLGNSQPGAESI*KAKQNT
Trigger: TGTATTTTGCTTGGCTTTCCAAATTGACTCAGCGCC...GGGCTGGGAGTTACCCAGGCATCGCAAAGCCACAAGGGCACGGCAGGAAGAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677328.1
CDS-3UTR TCA 90 bp CTGCGATCCCCACAATCCATAGCAGGTCAAAGAAGTCCAGCATCTCCAGGTTGGATCCTCAGGGGGATGTaGCCAATGGATCCCAGAGAG +
Preference number: 4 (lower is better)
Translates to: LRSPQSIAGQRSPASPGWILRGM*PMDPRE
Trigger: CTCTCTGGGATCCATTGGTCACATCCCCCTGAGGAT...CCAACCTGGAGATGCTGGACTTCTTTGACCTGCTATGGATTGTGGGGATCGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000547718.5
CDS-3UTR TCA 90 bp AAAACACCAAAGGCAGCTGTTTGTCCTACAGCAGAAGTCCTAAAAGATTCCAGGCACTCGCCTCGGAGCTaGGCGCCTGGCTGCGGTTTC +
Preference number: 4 (lower is better)
Translates to: KTPKAAVCPTAEVLKDSRHSPRS*APGCGF
Trigger: GAAACCGCAGCCAGGCGCTCAGCTCCGAGGCGAGTG...CCTGGAATCTTTTAGGACTTCTGCTGTAGGACAAACAGCTGCCTTTGGTGTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257575.9
ENST00000407967.7
CDS-3UTR TCA 90 bp AATCAGAATTCCAGGTCTGACTCCCAGCAGACTGTTCTATTTCCTTACACACCTACGCGGGCATCTGGATaGACACGTCCCCGCCGCCAG +
Preference number: 4 (lower is better)
Translates to: NQNSRSDSQQTVLFPYTPTRASG*TRPRRQ
Trigger: CTGGCGGCGGGGACGTGTTCATCCAGATGCCCGCGT...AGGTGTGTAAGGAAATAGAACAGTCTGCTGGGAGTCAGACCTGGAATTCTGATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257575.9
ENST00000392549.7
ENST00000547718.5
CDS-3UTR TCA 90 bp CACGTCCACAGATGTCGAAGGACTTGCAGAGGCTGTAGAGAACGATCAGGACCCATGCCGAGCTTATGCTaGAAGCACAGTTTGGCCAGG +
Preference number: 4 (lower is better)
Translates to: HVHRCRRTCRGCRERSGPMPSLC*KHSLAR
Trigger: CCTGGCCAAACTGTGCTTTCAGCATAAGCTCGGCAT...GGGTCCTGATCGTTCTCTACAGCCTCTGCAAGTCCTTCGACATCTGTGGACGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547718.5
CDS-3UTR TCA 90 bp GAGAGCCAGGGATGCCAAGCCAAGGGGAAAGTCCTGGTTTGGTGGCACACAGGGACAGCTGCTGGGAGCTaGATGTATAAAGCACATAGA +
Preference number: 4 (lower is better)
Translates to: ESQGCQAKGKVLVWWHTGTAAGS*MYKAHR
Trigger: TCTATGTGCTTTATACATTCAGCTCCCAGCAGCTGT...CCCTGTGTGCCACCAAACCAGGACTTTCCCCTTGGCTTGGCATCCCTGGCTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257575.9
ENST00000392549.7
CDS-3UTR TCA 90 bp CCTCTCTTTCTTCTAATCCCGAGTCTCAGCAGCCCGGATGTCTTCCTAACACTCTTGAGGTCAGGAGTTTaGGGCCAGCCTGGCCAACGT +
Preference number: 4 (lower is better)
Translates to: PLFLLIPSLSSPDVFLTLLRSGV*GQPGQR
Trigger: ACGTTGGCCAGGCTGGCCTCAAACTCCTGACCTCAA...GAGTGTTAGGAAGACATCCGGGCTGCTGAGACTCGGGATTAGAAGAAAGAGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257575.9
CDS-3UTR TCA 90 bp TGGAGAAGTGGCTCTGTCATAGAGATCACAGAAGCACAGATGGTTACGGTGCTCCATGCCTGGAATGTCTaGGGGGCAGAGCAGTGCGGA +
Preference number: 4 (lower is better)
Translates to: WRSGSVIEITEAQMVTVLHAWNV*GAEQCG
Trigger: TCCGCACTGCTCTGCCCCTCAGACATTCCAGGCATG...GAGCACCGTAACCATCTGTGCTTCTGTGATCTCTATGACAGAGCCACTTCTCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000257575.9
CDS-3UTR TCA 90 bp AGAGTCTGGTGGGAATGGGATGTTCAGGAGTTATCTGGAAAAACGCACACCCCGCAAGATGACCAGCACTaGCCTCTTCTCCCTCACGGG +
Preference number: 4 (lower is better)
Translates to: RVWWEWDVQELSGKTHTPQDDQH*PLLPHG
Trigger: CCCGTGAGGGAGAAGAGGTCAGTGCTGGTCATCTTG...CGGGGTGTGCGTTTTTCCAGATAACTCCTGAACATCCCATTCCCACCAGACTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000677328.1
CDS-3UTR GCA 90 bp CCAGGTCTGACTCCCAGCAGACTGTTCTATTTCCTTACACACCTGCACTTTCATCGCTGGTGGGGAGGCTaGCTCTGCCTTCAGACTCTC +
Preference number: 4 (lower is better)
Translates to: PGLTPSRLFYFLTHLHFHRWWGG*LCLQTL
Trigger: GAGAGTCTGAAGGCAGAGGCAGCCTCCCCACCAGCG...ATGAAAGTGCAGGTGTGTAAGGAAATAGAACAGTCTGCTGGGAGTCAGACCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257575.9
ENST00000392549.7
ENST00000547718.5
CDS-3UTR GCA 90 bp ACTGTTCTATTTCCTTACACACCTGCACTTTCATCAATCTTCTCCAGCTCCAATCCTCCCTCCTCCGAGTaGCCCCGGTGGTCCCCACCC +
Preference number: 4 (lower is better)
Translates to: TVLFPYTPALSSIFSSSNPPSSE*PRWSPP
Trigger: GGGTGGGGACCACCGGGGGCACTCGGAGGAGGGAGG...ATTGGAGCTGGAGAAGATTGATGAAAGTGCAGGTGTGTAAGGAAATAGAACAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000257575.9
ENST00000392549.7
ENST00000547718.5
CDS-3UTR GCA 90 bp CCAACAGATGGTATTTATTGGCTGAAGGGTACTTTGGGAGACATTAAAACACCACCTCCCTCCTCCGAGTaGCCCCGGTGGTCCCCACCC +
Preference number: 4 (lower is better)
Translates to: PTDGIYWLKGTLGDIKTPPPSSE*PRWSPP
Trigger: GGGTGGGGACCACCGGGGGCACTCGGAGGAGGGAGG...TGGTGTTTTAATGTCTCCCAAAGTACCCTTCAGCCAATAAATACCATCTGTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000257575.9
ENST00000407967.7
CDS-3UTR GCA 90 bp TATTGTTTTGGTGGCATGGGCATAATTGGAGAAACCATTGGGGTATTCACTAGTGCGGGCGTCCCAGGCTaGTCGTCGCCTCCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: YCFGGMGIIGETIGVFTSAGVPG*SSPPSS
Trigger: GGAGGAGGGAGGCGACGAGCAGCCTGGGACGCCCGC...ACTAGTGAATACCCCAATGGTTTCTCCAATTATGCCCATGCCACCAAAACAATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257575.9
ENST00000392549.7
ENST00000407967.7
ENST00000547718.5
CDS-3UTR GCA 90 bp GGAGAATCAGAGGCTCTCGGAACTCGGCCTGACAGATGGCGCAGATGTCACCAGAGATGTCGAAGGACTTaGAGAGGCTGTAGAGAACGA +
Preference number: 4 (lower is better)
Translates to: GESEALGTRPDRWRRCHQRCRRT*RGCRER
Trigger: TCGTTCTCTACAGCCTCTGCAAGTCCTTCGACATCT...CTGGTGACATCTGCGCCATCTGTCAGGCCGAGTTCCGAGAGCCTCTGATTCTCC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547718.5
CDS-3UTR GCA 90 bp TCTGCCCCTGTGTGTCCCCCACATGTTACATTCTTTACAGTGTTAACAGGCATGGCTTCTGTGCACTGCTaGCCGGTGGCTCGGACTCCA +
Preference number: 4 (lower is better)
Translates to: SAPVCPPHVTFFTVLTGMASVHC*PVARTP
Trigger: TGGAGTCCGAGCCACCGGGCAGCAGTGCACAGAAGC...CATGCCTGTTAACACTGTAAAGAATGTAACATGTGGGGGACACACAGGGGCAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257575.9
ENST00000407967.7
CDS-3UTR GCA 90 bp GTAGCCTGTGTTGGAAACACTCCTCATCAGACACTGTTTTCCCTAGGACAGAAGGCTTCTGTGCACTGCTaGCCGGTGGCTCGGACTCCA +
Preference number: 4 (lower is better)
Translates to: VACVGNTPHQTLFSLGQKASVHC*PVARTP
Trigger: TGGAGTCCGAGCCACCGGGCAGCAGTGCACAGAAGC...CTTCTGTCCTAGGGAAAACAGTGTCTGATGAGGAGTGTTTCCAACACAGGCTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257575.9
ENST00000407967.7
CDS-3UTR GCA 90 bp GATTATTCAGGCAAGTGGGATTGTAACATCATGGCCATCGCCATAGTAACGGAGAACTTGGCCCGCCCATaGTGGCTGGGTGACCCTGGG +
Preference number: 4 (lower is better)
Translates to: DYSGKWDCNIMAIAIVTENLARP*WLGDPG
Trigger: CCCAGGGTCACCCAGCCAGCATGGGCGGGCCAAGTT...CTCCGTTACTATGGCGATGGCCATGATGTTACAATCCCACTTGCCTGAATAATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257575.9
CDS-3UTR GCA 90 bp AGAGAGCCAGGGATGCCAAGCCAAGGGGAAAGTCCTGGTTTGGTGGCACACAGGGCTTGCATGGTAATCTaGCCACTAGCCACACAGATT +
Preference number: 4 (lower is better)
Translates to: REPGMPSQGESPGLVAHRACMVI*PLATQI
Trigger: AATCTGTGTGGCTAGTGGGCAGATTACCATGCAAGC...CCTGTGTGCCACCAAACCAGGACTTTCCCCTTGGCTTGGCATCCCTGGCTCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257575.9
CDS-3UTR GCA 90 bp TTGAGAGTCACTCACTCACCTACCCTGAGCCACTGGGCAGATTCTTATTCTGCCGACTGCTTCCTTGCCTaGAACACCCCCACTGGACTG +
Preference number: 4 (lower is better)
Translates to: LRVTHSPTLSHWADSYSADCFLA*NTPTGL
Trigger: CAGTCCAGTGGGGGTGTTGCAGGCAAGGAAGCAGTC...GGCAGAATAAGAATCTGCCCAGTGGCTCAGGGTAGGTGAGTGAGTGACTCTCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000677328.1
CDS-3UTR GCA 90 bp TTGAGAGTCACTCACTCACCTACCCTGAGCCACTGGGCAGATTCTTATTCTGCCGGGCCTTGGAGTGACTaGTTCCTTGCCTGCAACACC +
Preference number: 4 (lower is better)
Translates to: LRVTHSPTLSHWADSYSAGPWSD*FLACNT
Trigger: GGTGTTGCAGGCAAGGAAGCAGTCACTCCAAGGCCC...GGCAGAATAAGAATCTGCCCAGTGGCTCAGGGTAGGTGAGTGAGTGACTCTCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677328.1
CDS-3UTR CCA 90 bp CCTCTCTTTCTTCTAATCCCGAGTCTCAGCAGCCCGGATGTCTTCCTAACACTCTCGGAGCTGAGCGCCTaGCTGCGGTTTCTTTCAGGT +
Preference number: 4 (lower is better)
Translates to: PLFLLIPSLSSPDVFLTLSELSA*LRFLSG
Trigger: ACCTGAAAGAAACCGCAGCCAGGCGCTCAGCTCCGA...GAGTGTTAGGAAGACATCCGGGCTGCTGAGACTCGGGATTAGAAGAAAGAGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257575.9
ENST00000407967.7
CDS-3UTR CCA 90 bp TCTGCCCCTGTGTGTCCCCCACATGTTACATTCTTTACAGTGTTAACAGGCATGCGAGAAGAGCGCTGGTaGGGAGGCTGCCTCTGCCTT +
Preference number: 4 (lower is better)
Translates to: SAPVCPPHVTFFTVLTGMREERW*GGCLCL
Trigger: AAGGCAGAGGCAGCCTCCCCACCAGCGCTCTTCTCG...CATGCCTGTTAACACTGTAAAGAATGTAACATGTGGGGGACACACAGGGGCAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257575.9
ENST00000407967.7
CDS-3UTR CCA 90 bp AGCATCTGCAGGCAGGATGATCTTTCCGATAAAAACCAGTTGCAGAAGTTCCTGCTGGACGCGGGCATCTaGATGAACACGTCCCCGCCG +
Preference number: 4 (lower is better)
Translates to: SICRQDDLSDKNQLQKFLLDAGI*MNTSPP
Trigger: CGGCGGGGACGTGTTCATCCAGATGCCCGCGTCCAG...CAGGAACTTCTGCAACTGGTTTTTATCGGAAAGATCATCCTGCCTGCAGATGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257575.9
ENST00000392549.7
CDS-3UTR CCA 90 bp TTTGGAATCAGAATTCCAGGTCTGACTCCCAGCAGACTGTTCTATTTCCTTACATCCGAGTGCCCCCGGTaGTCCCCACCCACGTGCTGC +
Preference number: 4 (lower is better)
Translates to: FGIRIPGLTPSRLFYFLTSECPR*SPPTCC
Trigger: GCAGCACGTGGGTGGGGACCACCGGGGGCACTCGGA...TGTAAGGAAATAGAACAGTCTGCTGGGAGTCAGACCTGGAATTCTGATTCCAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000257575.9
ENST00000392549.7
ENST00000547718.5
CDS-3UTR CCA 90 bp CCCATGATGTATTTGTACCACAGCTGGATGGGGACAAGGGATCGGAACAGCTGGAAGGGGAGTCCTTTCTaGAGCCAGCAGATCACAGCC +
Preference number: 4 (lower is better)
Translates to: PMMYLYHSWMGTRDRNSWKGSPF*SQQITA
Trigger: GGCTGTGATCTGCTGGCTCCAGAAAGGACTCCCCTT...CCAGCTGTTCCGATCCCTTGTCCCCATCCAGCTGTGGTACAAATACATCATGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547718.5
CDS-3UTR CCA 90 bp GAGCTTGAAAGATGCTACACTGCCCTGGAACAGACGTCTTGCTGGGTACCAGGACCTGTTCTCGAAGCGTaGAGTTGGCATAGGCGAAGG +
Preference number: 4 (lower is better)
Translates to: ELERCYTALEQTSCWVPGPVLEA*SWHRRR
Trigger: CCTTCGCCTATGCCAACTCCACGCTTCGAGAACAGG...TCCTGGTACCCAGCAAGACGTCTGTTCCAGGGCAGTGTAGCATCTTTCAAGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257575.9
ENST00000392549.7
CDS-3UTR CCA 90 bp CCTCTCTTTCTTCTAATCCCGAGTCTCAGCAGCCCGGATGTCTTCCTAACACTCTGCACTGCTGCCCGGTaGCTCGGACTCCATAGTTCT +
Preference number: 4 (lower is better)
Translates to: PLFLLIPSLSSPDVFLTLCTAAR*LGLHSS
Trigger: AGAACTATGGAGTCCGAGCCACCGGGCAGCAGTGCA...GAGTGTTAGGAAGACATCCGGGCTGCTGAGACTCGGGATTAGAAGAAAGAGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257575.9
ENST00000407967.7
CDS-3UTR CCA 90 bp CCGAGTCTCAGCAGCCCGGATGTCTTCCTAACACTCTGCACATCATTCTTCTCTTGCACTGCTGCCCGGTaGCTCGGACTCCATAGTTCT +
Preference number: 4 (lower is better)
Translates to: PSLSSPDVFLTLCTSFFSCTAAR*LGLHSS
Trigger: AGAACTATGGAGTCCGAGCCACCGGGCAGCAGTGCA...AGAGAAGAATGATGTGCAGAGTGTTAGGAAGACATCCGGGCTGCTGAGACTCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257575.9
ENST00000407967.7
CDS-3UTR CCA 90 bp ATGCCAAGCCAAGGGGAAAGTCCTGGTTTGGTGGCACACAGGGGCAAATGTCCTTCACAGAACACGTGCTaGCACAGGAGAATCAGAGGC +
Preference number: 4 (lower is better)
Translates to: MPSQGESPGLVAHRGKCPSQNTC*HRRIRG
Trigger: GCCTCTGATTCTCCTGTGCCAGCACGTGTTCTGTGA...AGGACATTTGCCCCTGTGTGCCACCAAACCAGGACTTTCCCCTTGGCTTGGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257575.9
ENST00000392549.7
CDS-3UTR CCA 90 bp CCGAGTCTCAGCAGCCCGGATGTCTTCCTAACACTCTGCACATCATTCTTCTCTCCCTTGGCGTCCTTCTaGGTGTCCTCAGTGTTCGGT +
Preference number: 4 (lower is better)
Translates to: PSLSSPDVFLTLCTSFFSPLASF*VSSVFG
Trigger: ACCGAACACTGAGGACACCCAGAAGGACGCCAAGGG...AGAGAAGAATGATGTGCAGAGTGTTAGGAAGACATCCGGGCTGCTGAGACTCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257575.9
CDS-3UTR CCA 90 bp CCTCTCTTTCTTCTAATCCCGAGTCTCAGCAGCCCGGATGTCTTCCTAACACTCGAAGACCGTGTCTGCTaGGCCCCATGCCTGGAATGT +
Preference number: 4 (lower is better)
Translates to: PLFLLIPSLSSPDVFLTLEDRVC*APCLEC
Trigger: ACATTCCAGGCATGGGGCCCAGCAGACACGGTCTTC...GAGTGTTAGGAAGACATCCGGGCTGCTGAGACTCGGGATTAGAAGAAAGAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257575.9
CDS-3UTR CCA 90 bp AGGGGCAAATGTCCTGAATCCTTGGCGTCCTTCTGGGTGTCCTCAGTGTTCGGTGGGAAAGTCCTGGTTTaGTGGCACACAGGGGCAAAT +
Preference number: 4 (lower is better)
Translates to: RGKCPESLASFWVSSVFGGKVLV*WHTGAN
Trigger: ATTTGCCCCTGTGTGCCACCAAACCAGGACTTTCCC...ACCGAACACTGAGGACACCCAGAAGGACGCCAAGGATTCAGGACATTTGCCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392549.7
CDS-3UTR CCA 90 bp CCGAGTCTCAGCAGCCCGGATGTCTTCCTAACACTCTGCACATCATTCTTCTCTCCAAGGGGAAAGTCCTaGTTTGGTGGCACACAGGGG +
Preference number: 4 (lower is better)
Translates to: PSLSSPDVFLTLCTSFFSPRGKS*FGGTQG
Trigger: CCCCTGTGTGCCACCAAACCAGGACTTTCCCCTTGG...AGAGAAGAATGATGTGCAGAGTGTTAGGAAGACATCCGGGCTGCTGAGACTCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257575.9
CDS-3UTR CCA 90 bp GAGCTTGAAAGATGCTACACTGCCCTGGAACAGACGTCTTGCTGGGTACCAGGAGAACAGACGTCTTGCTaGGTACCAGGAGAGAGCCAG +
Preference number: 4 (lower is better)
Translates to: ELERCYTALEQTSCWVPGEQTSC*VPGESQ
Trigger: CTGGCTCTCTCCTGGTACCCAGCAAGACGTCTGTTC...TCCTGGTACCCAGCAAGACGTCTGTTCCAGGGCAGTGTAGCATCTTTCAAGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257575.9
ENST00000392549.7
CDS-3UTR CCA 90 bp TCCAACGGGGACTCCTGGCTGCTTTCGCACTGGTATAGGGGAATTCATGTAGCCCCCTTCAACAGCATCTaGCACAGGAGAATCAGAGGC +
Preference number: 4 (lower is better)
Translates to: SNGDSWLLSHWYRGIHVAPFNSI*HRRIRG
Trigger: GCCTCTGATTCTCCTGTGCCAGATGCTGTTGAAGGG...GGCTACATGAATTCCCCTATACCAGTGCGAAAGCAGCCAGGAGTCCCCGTTGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000407967.7
CDS-3UTR CCA 90 bp TTGAGAGTCACTCACTCACCTACCCTGAGCCACTGGGCAGATTCTTATTCTGCCCACCTGGAAATGGTCTaGGGGCTGTTGTGGTGGGCA +
Preference number: 4 (lower is better)
Translates to: LRVTHSPTLSHWADSYSAHLEMV*GLLWWA
Trigger: TGCCCACCACAACAGCCCCCAGACCATTTCCAGGTG...GGCAGAATAAGAATCTGCCCAGTGGCTCAGGGTAGGTGAGTGAGTGACTCTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677328.1
CDS-3UTR CCA 90 bp TTGAGAGTCACTCACTCACCTACCCTGAGCCACTGGGCAGATTCTTATTCTGCCCAGCCCATTCCTGTCTaGCACCACGGGGATCCAATG +
Preference number: 4 (lower is better)
Translates to: LRVTHSPTLSHWADSYSAQPIPV*HHGDPM
Trigger: CATTGGATCCCCGTGGTGCCAGACAGGAATGGGCTG...GGCAGAATAAGAATCTGCCCAGTGGCTCAGGGTAGGTGAGTGAGTGACTCTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677328.1
CDS-3UTR CCA 90 bp CCGAACTGTTTTCCACTTCCACACCATGGCTGCGGCTGTCCCCTCTTCCTGCCGTGTTCAGGAGTTATCTaGAAAAACGCACACCCCGAA +
Preference number: 4 (lower is better)
Translates to: PNCFPLPHHGCGCPLFLPCSGVI*KNAHPE
Trigger: TTCGGGGTGTGCGTTTTTCCAGATAACTCCTGAACA...CGGCAGGAAGAGGGGACAGCCGCAGCCATGGTGTGGAAGTGGAAAACAGTTCGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000677328.1
CDS-3UTR TCA 90 bp TACCACAGCTGGATGGGGACAAGGGATCGGAACAGCTGGCTCAGCTCCTCGATGATCTTCCTTAACACCTaGTTCACTGTGAAGAGCCAC +
Preference number: 4 (lower is better)
Translates to: YHSWMGTRDRNSWLSSSMIFLNT*FTVKSH
Trigger: GTGGCTCTTCACAGTGAATCAGGTGTTAAGGAAGAT...CATCGAGGAGCTGAGCCAGCTGTTCCGATCCCTTGTCCCCATCCAGCTGTGGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547718.5
CDS-3UTR TCA 90 bp CACAGGGCTGTTGTGAGGATGACAGCACGTAATCCAAGCAGGATGCTGCATGCTATGCCGAGCTTATGCTaGAAGCACAGTTTGGCCAGG +
Preference number: 4 (lower is better)
Translates to: HRAVVRMTARNPSRMLHAMPSLC*KHSLAR
Trigger: CCTGGCCAAACTGTGCTTTCAGCATAAGCTCGGCAT...AGCATGCAGCATCCTGCTTGGATTACGTGCTGTCATCCTCACAACAGCCCTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257575.9
CDS-3UTR TCA 90 bp ATGCCAAGCCAAGGGGAAAGTCCTGGTTTGGTGGCACACAGGGGCAAATGTCCTTGGGCTTCAGGAATATaGGGCTGTTGTACAGCTGCT +
Preference number: 4 (lower is better)
Translates to: MPSQGESPGLVAHRGKCPWASGI*GCCTAA
Trigger: AGCAGCTGTACAACAGCCTCATATTCCTGAAGCCCA...AGGACATTTGCCCCTGTGTGCCACCAAACCAGGACTTTCCCCTTGGCTTGGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257575.9
ENST00000392549.7
CDS-3UTR TCA 90 bp GAGAGTGGCATTGTTCTTTTCCAACGGGGACTCCTGGCTGCTTTCGCACTGGTAGAGGCTGAGGCGAGCTaGTCATTTGAGGTCAAGAGT +
Preference number: 4 (lower is better)
Translates to: ESGIVLFQRGLLAAFALVEAEAS*SFEVKS
Trigger: ACTCTTGACCTCAAATGATCAGCTCGCCTCAGCCTC...TACCAGTGCGAAAGCAGCCAGGAGTCCCCGTTGGAAAAGAACAATGCCACTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257575.9
CDS-3UTR TCA 90 bp TGGAGAAGTGGCTCTGTCATAGAGATCACAGAAGCACAGATGGTTACGGTGCTCCTATCTGGGAGGCAGTaGTCTCTAGGCTCCTCCCCA +
Preference number: 4 (lower is better)
Translates to: WRSGSVIEITEAQMVTVLLSGRQ*SLGSSP
Trigger: TGGGGAGGAGCCTAGAGATCACTGCCTCCCAGATAG...GAGCACCGTAACCATCTGTGCTTCTGTGATCTCTATGACAGAGCCACTTCTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257575.9
CDS-3UTR TCA 90 bp CTGCACTTTCATCAATCTTCTCCAGCTCCAATTTCTTGTGCCCCTTCAACAGCACCCATGCTGGCTGGGTaGCCCTGGGAAAGTTACCGC +
Preference number: 4 (lower is better)
Translates to: LHFHQSSPAPISCAPSTAPMLAG*PWESYR
Trigger: GCGGTAACTTTCCCAGGGTCACCCAGCCAGCATGGG...TGCTGTTGAAGGGGCACAAGAAATTGGAGCTGGAGAAGATTGATGAAAGTGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257575.9
CDS-3UTR TCA 90 bp TTGGTTCCAGCAGGTAATACACTGGGTTCCGTCACCCTGGAGATGGCTACAGGGTCAGAATTCCAGGTCTaGCTCCCAGCAGACTGTTCT +
Preference number: 4 (lower is better)
Translates to: LVPAGNTLGSVTLEMATGSEFQV*LPADCS
Trigger: AGAACAGTCTGCTGGGAGTCAGACCTGGAATTCTGA...CCCTGTAGCCATCTCCAGGGTGACGGAACCCAGTGTATTACCTGCTGGAACCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257575.9
ENST00000392549.7
ENST00000407967.7
ENST00000547718.5
CDS-3UTR TCA 90 bp TCCAACGGGGACTCCTGGCTGCTTTCGCACTGGTATAGGGGAATTCATGTAGCCTCAGAATTCCAGGTCTaGCTCCCAGCAGACTGTTCT +
Preference number: 4 (lower is better)
Translates to: SNGDSWLLSHWYRGIHVASEFQV*LPADCS
Trigger: AGAACAGTCTGCTGGGAGTCAGACCTGGAATTCTGA...GGCTACATGAATTCCCCTATACCAGTGCGAAAGCAGCCAGGAGTCCCCGTTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257575.9
ENST00000407967.7
CDS-3UTR GCA 90 bp ATCTTGGGCAGGGCCACGATGAGGCACTTGAGGGCGATGGTGATGTACTTCAGAGAATGTTATCCGTGTTaGTGCTGTGGCGTCTCTGCA +
Preference number: 4 (lower is better)
Translates to: ILGRATMRHLRAMVMYFRECYPC*CCGVSA
Trigger: TGCAGAGACGCCACAGCAGCAACACGGATAACATTC...TCTGAAGTACATCACCATCGCCCTCAAGTGCCTCATCGTGGCCCTGCCCAAGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547718.5
CDS-3UTR GCA 90 bp AGCCTGTGTTGGAAACACTCCTCATCAGACACTGTTTTCCCTAGGACAGAAGTTCGCTGGTGGGGAGGCTaGCTCTGCCTTCAGACTCTC +
Preference number: 4 (lower is better)
Translates to: SLCWKHSSSDTVFPRTEVRWWGG*LCLQTL
Trigger: GAGAGTCTGAAGGCAGAGGCAGCCTCCCCACCAGCG...AACTTCTGTCCTAGGGAAAACAGTGTCTGATGAGGAGTGTTTCCAACACAGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257575.9
ENST00000407967.7
CDS-3UTR GCA 90 bp CCAGGTCTGACTCCCAGCAGACTGTTCTATTTCCTTACACACCTGCACTTTCATGTACACCTGGAAGTGTaGGGACGTGGCGCCGTCCTT +
Preference number: 4 (lower is better)
Translates to: PGLTPSRLFYFLTHLHFHVHLEV*GRGAVL
Trigger: AAGGACGGCGCCACGTCCGCACACTTCCAGGTGTAC...ATGAAAGTGCAGGTGTGTAAGGAAATAGAACAGTCTGCTGGGAGTCAGACCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257575.9
ENST00000392549.7
CDS-3UTR CCA 90 bp TGTTTTGGTGGCATGGGCATAATTGGAGAAACCATTGGGGTATTCACTAGTAACGCCCGAGAAGAGCGCTaGTGGGGAGGCTGCCTCTGC +
Preference number: 4 (lower is better)
Translates to: CFGGMGIIGETIGVFTSNAREER*WGGCLC
Trigger: GCAGAGGCAGCCTCCCCACCAGCGCTCTTCTCGGGC...GTTACTAGTGAATACCCCAATGGTTTCTCCAATTATGCCCATGCCACCAAAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000257575.9
ENST00000392549.7
ENST00000407967.7
ENST00000547718.5
CDS-3UTR CCA 90 bp TTACCTCTCTTTCTTCTAATCCCGAGTCTCAGCAGCCCGGATGTCTTCCTAACATGGAGGGGAACGAGCTaGTGGGGAGGCTGCCTGATA +
Preference number: 4 (lower is better)
Translates to: LPLFLLIPSLSSPDVFLTWRGTS*WGGCLI
Trigger: TATCAGGCAGCCTCCCCACCAGCTCGTTCCCCTCCA...TGTTAGGAAGACATCCGGGCTGCTGAGACTCGGGATTAGAAGAAAGAGAGGTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257575.9
ENST00000407967.7
CDS-3UTR CCA 90 bp ACTTCCCAAAGTAATAAAGAGTTTGGAATCAGAATTCCAGGTCTGACTCCCAGCCCGCGGTGGCCGCCATaGTGGAAATGGTGGTGGGGC +
Preference number: 4 (lower is better)
Translates to: TSQSNKEFGIRIPGLTPSPRWPP*WKWWWG
Trigger: GCCCCACCACCATTTCCACCATGGCGGCCACCGCGG...GCTGGGAGTCAGACCTGGAATTCTGATTCCAAACTCTTTATTACTTTGGGAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257575.9
ENST00000392549.7
ENST00000407967.7
ENST00000547718.5
CDS-3UTR CCA 90 bp TTTGGAATCAGAATTCCAGGTCTGACTCCCAGCAGACTGTTCTATTTCCTTACAAGGGAGCCCCCGCGGTaGCCGCCATGGTGGAAATGG +
Preference number: 4 (lower is better)
Translates to: FGIRIPGLTPSRLFYFLTREPPR*PPWWKW
Trigger: CCATTTCCACCATGGCGGCCACCGCGGGGGCTCCCT...TGTAAGGAAATAGAACAGTCTGCTGGGAGTCAGACCTGGAATTCTGATTCCAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000257575.9
ENST00000392549.7
ENST00000547718.5
CDS-3UTR CCA 90 bp TGTGTTGGAAACACTCCTCATCAGACACTGTTTTCCCTAGGACAGAAGTTAAATTCCGAGTGCCCCCGGTaGTCCCCACCCACGTGCTGC +
Preference number: 4 (lower is better)
Translates to: CVGNTPHQTLFSLGQKLNSECPR*SPPTCC
Trigger: GCAGCACGTGGGTGGGGACCACCGGGGGCACTCGGA...ATTTAACTTCTGTCCTAGGGAAAACAGTGTCTGATGAGGAGTGTTTCCAACACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000257575.9
ENST00000407967.7
CDS-3UTR CCA 90 bp GCAGACTGTTCTATTTCCTTACACACCTGCACTTTCATCAATCTTCTCCAGCTCGGAAGTGTGCGGACGTaGCGCCGTCCTTCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: ADCSISLHTCTFINLLQLGSVRT*RRPSSS
Trigger: GCTGCTGGAAGGACGGCGCCACGTCCGCACACTTCC...GAGCTGGAGAAGATTGATGAAAGTGCAGGTGTGTAAGGAAATAGAACAGTCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257575.9
ENST00000392549.7
CDS-3UTR CCA 90 bp CACAGGGCTGTTGTGAGGATGACAGCACGTAATCCAAGCAGGATGCTGCATGCTGCCAGGTCCTTGACTTaGAGTGGAGAAGGAAGATGC +
Preference number: 4 (lower is better)
Translates to: HRAVVRMTARNPSRMLHAARSLT*SGEGRC
Trigger: GCATCTTCCTTCTCCACTCCAAGTCAAGGACCTGGC...AGCATGCAGCATCCTGCTTGGATTACGTGCTGTCATCCTCACAACAGCCCTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257575.9
CDS-3UTR CCA 90 bp CCCTTCAACAGCATCTGCAGGCAGGATGATCTTTCCGATAAAAACCAGTTGCAGAACCAGCAGGTGGGCTaGGCACAGGGGCTCATACCT +
Preference number: 4 (lower is better)
Translates to: PFNSICRQDDLSDKNQLQNQQVG*AQGLIP
Trigger: AGGTATGAGCCCCTGTGCCCAGCCCACCTGCTGGTT...CTGCAACTGGTTTTTATCGGAAAGATCATCCTGCCTGCAGATGCTGTTGAAGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000257575.9
CDS-3UTR CCA 90 bp TTTGCAGGGGAAGGAGGCACGCACTATACCACAGAACGAGAGAGGAAGATGAAGAAAATAACCAGCAGGTaGGCTGGGCACAGGGGCTCA +
Preference number: 4 (lower is better)
Translates to: FAGEGGTHYTTERERKMKKITSR*AGHRGS
Trigger: TGAGCCCCTGTGCCCAGCCCACCTGCTGGTTATTTT...CTTCATCTTCCTCTCTCGTTCTGTGGTATAGTGCGTGCCTCCTTCCCCTGCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000257575.9
CDS-3UTR CCA 90 bp CTCTCGTGTGCTTTTAGAAGACCGTGTCTGCTGGGCCCCATGCCTGGAATGTCTCTCCTCCATTTCTCCTaGGGCTTGCATGGTAATCTG +
Preference number: 4 (lower is better)
Translates to: LSCAFRRPCLLGPMPGMSLLHFS*GLHGNL
Trigger: CAGATTACCATGCAAGCCCCAGGAGAAATGGAGGAG...AGACATTCCAGGCATGGGGCCCAGCAGACACGGTCTTCTAAAAGCACACGAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257575.9
CDS-3UTR CCA 90 bp AGAGAGCCAGGGATGCCAAGCCAAGGGGAAAGTCCTGGTTTGGTGGCACACAGGTGGCTGCTTTCGCACTaGTATAGGGGAATTCATGTA +
Preference number: 4 (lower is better)
Translates to: REPGMPSQGESPGLVAHRWLLSH*YRGIHV
Trigger: TACATGAATTCCCCTATACCAGTGCGAAAGCAGCCA...CCTGTGTGCCACCAAACCAGGACTTTCCCCTTGGCTTGGCATCCCTGGCTCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257575.9
CDS-3UTR CCA 90 bp TTGAGAGTCACTCACTCACCTACCCTGAGCCACTGGGCAGATTCTTATTCTGCCCTCTCCACCTGGAAATaGTCTGGGGGCTGTTGTGGT +
Preference number: 4 (lower is better)
Translates to: LRVTHSPTLSHWADSYSALSTWK*SGGCCG
Trigger: ACCACAACAGCCCCCAGACCATTTCCAGGTGGAGAG...GGCAGAATAAGAATCTGCCCAGTGGCTCAGGGTAGGTGAGTGAGTGACTCTCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000677328.1
CDS-3UTR CCA 90 bp TTGAGAGTCACTCACTCACCTACCCTGAGCCACTGGGCAGATTCTTATTCTGCCCTGCAACACCCCCACTaGACTGTGAGCTTTCAGCGT +
Preference number: 4 (lower is better)
Translates to: LRVTHSPTLSHWADSYSALQHPH*TVSFQR
Trigger: ACGCTGAAAGCTCACAGTCCAGTGGGGGTGTTGCAG...GGCAGAATAAGAATCTGCCCAGTGGCTCAGGGTAGGTGAGTGAGTGACTCTCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000677328.1
3UTR CAA 72 bp AAGGGCATCAAGTCTGAGTTAGGAAGACGTCCCCTTTaGCAGGGGAAGGAGGCACGCACTATACCACAGAAC +
Preference number: 4 (lower is better)
Translates to: KGIKSELGRRPL*QGKEARTIPQN
Trigger: GTTCTGTGGTATAGTGCGTGCCTCCTTCCCCTGCAAAAGGGGACGTCTTCCTAACTCAGACTTGATGCCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257575.9
CDS-3UTR TCA 90 bp ACTGTTCTATTTCCTTACACACCTGCACTTTCATCAATCTTCTCCAGCTCCAATCACTCGCCTCGGAGCTaGGCGCCTGGCTGCGGTTTC +
Preference number: 4 (lower is better)
Translates to: TVLFPYTPALSSIFSSSNHSPRS*APGCGF
Trigger: GAAACCGCAGCCAGGCGCTCAGCTCCGAGGCGAGTG...ATTGGAGCTGGAGAAGATTGATGAAAGTGCAGGTGTGTAAGGAAATAGAACAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257575.9
ENST00000392549.7
ENST00000547718.5
CDS-3UTR TCA 90 bp GATGCCTGGGTAACTCCCAGCCCTGCTTTAAAACTCAGCTCTGATGTCACCTTCCCAGGATCCACAAGATaGCCAGCACTGACCTCTTCT +
Preference number: 4 (lower is better)
Translates to: DAWVTPSPALKLSSDVTFPGSTR*PALTSS
Trigger: AGAAGAGGTCAGTGCTGGTCATCTTGTGGATCCTGG...GAAGGTGACATCAGAGCTGAGTTTTAAAGCAGGGCTGGGAGTTACCCAGGCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677328.1
CDS-3UTR TCA 90 bp CTTGTGGCTTTGCGATGCCTGGGTAACTCCCAGCCCTGCTTTAAAACTCAGCTCTGGGCTTCAGGAATATaGGGCTGTTGTACAGCTGCT +
Preference number: 4 (lower is better)
Translates to: LVALRCLGNSQPCFKTQLWASGI*GCCTAA
Trigger: AGCAGCTGTACAACAGCCTCATATTCCTGAAGCCCA...GAGCTGAGTTTTAAAGCAGGGCTGGGAGTTACCCAGGCATCGCAAAGCCACAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677328.1
CDS-3UTR TCA 90 bp TTGGTTCCAGCAGGTAATACACTGGGTTCCGTCACCCTGGAGATGGCTACAGGGAGGAGTCGTCACCCATaGTGTATTTGTACCACAGCT +
Preference number: 4 (lower is better)
Translates to: LVPAGNTLGSVTLEMATGRSRHP*CICTTA
Trigger: AGCTGTGGTACAAATACATCATGGGTGACGACTCCT...CCCTGTAGCCATCTCCAGGGTGACGGAACCCAGTGTATTACCTGCTGGAACCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257575.9
ENST00000392549.7
ENST00000407967.7
ENST00000547718.5
CDS-3UTR TCA 90 bp AGGGGCAAATGTCCTGAATCCTTGGCGTCCTTCTGGGTGTCCTCAGTGTTCGGTAGGAGTCGTCACCCATaGTGTATTTGTACCACAGCT +
Preference number: 4 (lower is better)
Translates to: RGKCPESLASFWVSSVFGRSRHP*CICTTA
Trigger: AGCTGTGGTACAAATACATCATGGGTGACGACTCCT...ACCGAACACTGAGGACACCCAGAAGGACGCCAAGGATTCAGGACATTTGCCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392549.7
CDS-3UTR TCA 90 bp CCAGGTCTGACTCCCAGCAGACTGTTCTATTTCCTTACACACCTGCACTTTCATTCTCGGAACTCGGCCTaGCAGATGGCGCAGATGTCA +
Preference number: 4 (lower is better)
Translates to: PGLTPSRLFYFLTHLHFHSRNSA*QMAQMS
Trigger: TGACATCTGCGCCATCTGTCAGGCCGAGTTCCGAGA...ATGAAAGTGCAGGTGTGTAAGGAAATAGAACAGTCTGCTGGGAGTCAGACCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257575.9
ENST00000392549.7
ENST00000547718.5
CDS-3UTR TCA 90 bp AAAACACCAAAGGCAGCTGTTTGTCCTACAGCAGAAGTCCTAAAAGATTCCAGGCAGGGGCAAATGTCCTaGATCTACGGCGGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: KTPKAAVCPTAEVLKDSRQGQMS*IYGGAG
Trigger: CCCTGCCCCGCCGTAGATTCAGGACATTTGCCCCTG...CCTGGAATCTTTTAGGACTTCTGCTGTAGGACAAACAGCTGCCTTTGGTGTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000257575.9
CDS-3UTR TCA 90 bp CTGCGATCCCCACAATCCATAGCAGGTCAAAGAAGTCCAGCATCTCCAGGTTGGTCAGAATTCCAGGTCTaGCTCCCAGCAGACTGTTCT +
Preference number: 4 (lower is better)
Translates to: LRSPQSIAGQRSPASPGWSEFQV*LPADCS
Trigger: AGAACAGTCTGCTGGGAGTCAGACCTGGAATTCTGA...CCAACCTGGAGATGCTGGACTTCTTTGACCTGCTATGGATTGTGGGGATCGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547718.5
CDS-3UTR TCA 90 bp TTAGAGTCTGGTGGGAATGGGATGTTCAGGAGTTATCTGGAAAAACGCACACCCCAGAGGGCCTTGGAGTaGCTGCTTCCTTGCCTGCAA +
Preference number: 4 (lower is better)
Translates to: LESGGNGMFRSYLEKRTPQRALE*LLPCLQ
Trigger: TTGCAGGCAAGGAAGCAGTCACTCCAAGGCCCTCTG...GGGTGTGCGTTTTTCCAGATAACTCCTGAACATCCCATTCCCACCAGACTCTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000677328.1
CDS-3UTR GCA 90 bp GTAGCCTGTGTTGGAAACACTCCTCATCAGACACTGTTTTCCCTAGGACAGAAGTGCTGGCCATCCCGATaGACACAGCAATGCCGAGCT +
Preference number: 4 (lower is better)
Translates to: VACVGNTPHQTLFSLGQKCWPSR*TQQCRA
Trigger: AGCTCGGCATTGCTGTGTGCATCGGGATGGCCAGCA...CTTCTGTCCTAGGGAAAACAGTGTCTGATGAGGAGTGTTTCCAACACAGGCTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257575.9
ENST00000407967.7
CDS-3UTR GCA 90 bp GTAGCCTGTGTTGGAAACACTCCTCATCAGACACTGTTTTCCCTAGGACAGAAGTGGCATAGGCGAAGGTaGTGGCCATCCCGATGCACA +
Preference number: 4 (lower is better)
Translates to: VACVGNTPHQTLFSLGQKWHRRR*WPSRCT
Trigger: TGTGCATCGGGATGGCCAGCACCTTCGCCTATGCCA...CTTCTGTCCTAGGGAAAACAGTGTCTGATGAGGAGTGTTTCCAACACAGGCTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257575.9
ENST00000407967.7
CDS-3UTR GCA 90 bp AGCCTGTGTTGGAAACACTCCTCATCAGACACTGTTTTCCCTAGGACAGAAGTTTGTCACCAGCTTCTGTaGACTGCTGCCCGGTGGCTC +
Preference number: 4 (lower is better)
Translates to: SLCWKHSSSDTVFPRTEVCHQLL*TAARWL
Trigger: GAGCCACCGGGCAGCAGTGCACAGAAGCTGGTGACA...AACTTCTGTCCTAGGGAAAACAGTGTCTGATGAGGAGTGTTTCCAACACAGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257575.9
ENST00000407967.7
CDS-3UTR GCA 90 bp TCTGCAGGCAGGATGATCTTTCCGATAAAAACCAGTTGCAGAAGTTCCTGTTGCTGTCACCAGCTTCTGTaGACTGCTGCCCGGTGGCTC +
Preference number: 4 (lower is better)
Translates to: SAGRMIFPIKTSCRSSCCCHQLL*TAARWL
Trigger: GAGCCACCGGGCAGCAGTGCACAGAAGCTGGTGACA...GCAACAGGAACTTCTGCAACTGGTTTTTATCGGAAAGATCATCCTGCCTGCAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257575.9
ENST00000392549.7
CDS-3UTR GCA 90 bp TCTGCCCCTGTGTGTCCCCCACATGTTACATTCTTTACAGTGTTAACAGGCATGGGTTACGGTGCTCCATaGCACTACCCTGGTTGGTGG +
Preference number: 4 (lower is better)
Translates to: SAPVCPPHVTFFTVLTGMGYGAP*HYPGWW
Trigger: CCACCAACCAGGGTAGTGGCATGGAGCACCGTAACC...CATGCCTGTTAACACTGTAAAGAATGTAACATGTGGGGGACACACAGGGGCAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000257575.9
CDS-3UTR GCA 90 bp CCGAGTCTCAGCAGCCCGGATGTCTTCCTAACACTCTGCACATCATTCTTCTCTCTGCGTGGTCACCTGTaGCATCTCATGCCAGATTTC +
Preference number: 4 (lower is better)
Translates to: PSLSSPDVFLTLCTSFFSLRGHL*HLMPDF
Trigger: GAAATCTGGCATGAGATGGCACAGGTGACCACGCAG...AGAGAAGAATGATGTGCAGAGTGTTAGGAAGACATCCGGGCTGCTGAGACTCGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257575.9
CDS-3UTR GCA 90 bp GAGAGCCAGGGATGCCAAGCCAAGGGGAAAGTCCTGGTTTGGTGGCACACAGGGACTAGCCACACAGATTaGTTTCTCTGTAATGCCATT +
Preference number: 4 (lower is better)
Translates to: ESQGCQAKGKVLVWWHTGTSHTD*FLCNAI
Trigger: AATGGCATTACAGAGAAAGCAATCTGTGTGGCTAGT...CCCTGTGTGCCACCAAACCAGGACTTTCCCCTTGGCTTGGCATCCCTGGCTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257575.9
CDS-3UTR GCA 90 bp GAGCTTGAAAGATGCTACACTGCCCTGGAACAGACGTCTTGCTGGGTACCAGGAACGGAGCTTGAAAGATaGTACACTGCCCTGGAACAG +
Preference number: 4 (lower is better)
Translates to: ELERCYTALEQTSCWVPGTELER*YTALEQ
Trigger: CTGTTCCAGGGCAGTGTAGCATCTTTCAAGCTCCGT...TCCTGGTACCCAGCAAGACGTCTGTTCCAGGGCAGTGTAGCATCTTTCAAGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257575.9
ENST00000392549.7
CDS-3UTR GCA 90 bp ACAGATGGCGCAGATGTCACCAGCTTCTGTGCACTGCTGCCCGGTGGCTCGGACATTTCCTTACACACCTaGACTTTCATCAATCTTCTC +
Preference number: 4 (lower is better)
Translates to: TDGADVTSFCALLPGGSDISLHT*TFINLL
Trigger: GAGAAGATTGATGAAAGTGCAGGTGTGTAAGGAAAT...GTCCGAGCCACCGGGCAGCAGTGCACAGAAGCTGGTGACATCTGCGCCATCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547718.5
CDS-3UTR GCA 90 bp AAGAAAACCTCAGATGGGACGTTCCCCCAGAGGGTAGGGCATGCACTAATAAAAACGGGGACTCCTGGCTaGTTTCGCACTGGTATAGGG +
Preference number: 4 (lower is better)
Translates to: KKTSDGTFPQRVGHALIKTGTPG*FRTGIG
Trigger: CCCTATACCAGTGCGAAAGCAGCCAGGAGTCCCCGT...TTTTATTAGTGCATGCCCTACCCTCTGGGGGAACGTCCCATCTGAGGTTTTCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000257575.9
ENST00000407967.7
CDS-3UTR CCA 90 bp TGTGCCCCTTCAACAGCATCTGCAGGCAGGATGATCTTTCCGATAAAAACCAGTCATAGGCGAAGGTGCTaGCCATCCCGATGCACACAG +
Preference number: 4 (lower is better)
Translates to: CAPSTASAGRMIFPIKTSHRRRC*PSRCTQ
Trigger: CTGTGTGCATCGGGATGGCCAGCACCTTCGCCTATG...ACTGGTTTTTATCGGAAAGATCATCCTGCCTGCAGATGCTGTTGAAGGGGCACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257575.9
ENST00000392549.7
CDS-3UTR CCA 90 bp AAGAAAACCTCAGATGGGACGTTCCCCCAGAGGGTAGGGCATGCACTAATAAAACATAGGCGAAGGTGCTaGCCATCCCGATGCACACAG +
Preference number: 4 (lower is better)
Translates to: KKTSDGTFPQRVGHALIKHRRRC*PSRCTQ
Trigger: CTGTGTGCATCGGGATGGCCAGCACCTTCGCCTATG...TTTTATTAGTGCATGCCCTACCCTCTGGGGGAACGTCCCATCTGAGGTTTTCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000257575.9
ENST00000407967.7
CDS-3UTR CCA 90 bp GAGCTTGAAAGATGCTACACTGCCCTGGAACAGACGTCTTGCTGGGTACCAGGATATTTGTACCACAGCTaGATGGGGACAAGGGATCGG +
Preference number: 4 (lower is better)
Translates to: ELERCYTALEQTSCWVPGYLYHS*MGTRDR
Trigger: CCGATCCCTTGTCCCCATCCAGCTGTGGTACAAATA...TCCTGGTACCCAGCAAGACGTCTGTTCCAGGGCAGTGTAGCATCTTTCAAGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257575.9
ENST00000392549.7
CDS-3UTR CCA 90 bp GCAGACTGTTCTATTTCCTTACACACCTGCACTTTCATCAATCTTCTCCAGCTCACAGGGGCGGGACTTTaGGGTCAGAGGTGGTGGAGG +
Preference number: 4 (lower is better)
Translates to: ADCSISLHTCTFINLLQLTGAGL*GQRWWR
Trigger: CCTCCACCACCTCTGACCCCAAAGTCCCGCCCCTGT...GAGCTGGAGAAGATTGATGAAAGTGCAGGTGTGTAAGGAAATAGAACAGTCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257575.9
CDS-3UTR CCA 90 bp ATCAATCTTCTCCAGCTCCAATTTCTTGTGCCCCTTCAACAGCATCTGCAGGCACAGGCCTGGGCTATCTaGGAGGCAGTGATCTCTAGG +
Preference number: 4 (lower is better)
Translates to: INLLQLQFLVPLQQHLQAQAWAI*EAVISR
Trigger: CCTAGAGATCACTGCCTCCCAGATAGCCCAGGCCTG...TGCCTGCAGATGCTGTTGAAGGGGCACAAGAAATTGGAGCTGGAGAAGATTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257575.9
CDS-3UTR CCA 90 bp TTACCTCTCTTTCTTCTAATCCCGAGTCTCAGCAGCCCGGATGTCTTCCTAACAGGGCAGGCAAGATTCTaGTGGCTTCTGCGTGGTCAC +
Preference number: 4 (lower is better)
Translates to: LPLFLLIPSLSSPDVFLTGQARF*WLLRGH
Trigger: GTGACCACGCAGAAGCCACCAGAATCTTGCCTGCCC...TGTTAGGAAGACATCCGGGCTGCTGAGACTCGGGATTAGAAGAAAGAGAGGTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257575.9
CDS-3UTR CCA 90 bp CCGAGTCTCAGCAGCCCGGATGTCTTCCTAACACTCTGCACATCATTCTTCTCTGGGAAAGTCCTGGTTTaGTGGCACACAGGGGCAAAT +
Preference number: 4 (lower is better)
Translates to: PSLSSPDVFLTLCTSFFSGKVLV*WHTGAN
Trigger: ATTTGCCCCTGTGTGCCACCAAACCAGGACTTTCCC...AGAGAAGAATGATGTGCAGAGTGTTAGGAAGACATCCGGGCTGCTGAGACTCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257575.9
CDS-3UTR CCA 90 bp CTTGAAAGATGCTACACTGCCCTGGAACAGACGTCTTGCTGGGTACCAGGAGAGCCTGTTGCTTCCCTTTaGTTTTTCCTCAGGGTAGGG +
Preference number: 4 (lower is better)
Translates to: LERCYTALEQTSCWVPGEPVASL*FFLRVG
Trigger: CCCTACCCTGAGGAAAAACCAAAGGGAAGCAACAGG...CTCTCCTGGTACCCAGCAAGACGTCTGTTCCAGGGCAGTGTAGCATCTTTCAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257575.9
ENST00000392549.7
CDS-3UTR CCA 90 bp CTACACTGCCCTGGAACAGACGTCTTGCTGGGTACCAGGAGAGAGCCAGGGATGTGGCATGGGCATAATTaGAGAAACCATTGGGGTATT +
Preference number: 4 (lower is better)
Translates to: LHCPGTDVLLGTRREPGMWHGHN*RNHWGI
Trigger: AATACCCCAATGGTTTCTCCAATTATGCCCATGCCA...CATCCCTGGCTCTCTCCTGGTACCCAGCAAGACGTCTGTTCCAGGGCAGTGTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257575.9
ENST00000392549.7
CDS-3UTR CCA 90 bp CCTCTCTTTCTTCTAATCCCGAGTCTCAGCAGCCCGGATGTCTTCCTAACACTCGAAGAAAACCTCAGATaGGACGTTCCCCCAGAGGGT +
Preference number: 4 (lower is better)
Translates to: PLFLLIPSLSSPDVFLTLEENLR*DVPPEG
Trigger: ACCCTCTGGGGGAACGTCCCATCTGAGGTTTTCTTC...GAGTGTTAGGAAGACATCCGGGCTGCTGAGACTCGGGATTAGAAGAAAGAGAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257575.9
ENST00000407967.7
CDS-3UTR TCA 90 bp TTGGTTCCAGCAGGTAATACACTGGGTTCCGTCACCCTGGAGATGGCTACAGGGATCTTCCTTAACACCTaGTTCACTGTGAAGAGCCAC +
Preference number: 4 (lower is better)
Translates to: LVPAGNTLGSVTLEMATGIFLNT*FTVKSH
Trigger: GTGGCTCTTCACAGTGAATCAGGTGTTAAGGAAGAT...CCCTGTAGCCATCTCCAGGGTGACGGAACCCAGTGTATTACCTGCTGGAACCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257575.9
ENST00000392549.7
ENST00000407967.7
ENST00000547718.5
CDS-3UTR TCA 90 bp TCCAACGGGGACTCCTGGCTGCTTTCGCACTGGTATAGGGGAATTCATGTAGCCACAGCTGCTGGGAGCTaGATGTATAAAGCACATAGA +
Preference number: 4 (lower is better)
Translates to: SNGDSWLLSHWYRGIHVATAAGS*MYKAHR
Trigger: TCTATGTGCTTTATACATTCAGCTCCCAGCAGCTGT...GGCTACATGAATTCCCCTATACCAGTGCGAAAGCAGCCAGGAGTCCCCGTTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257575.9
ENST00000407967.7
CDS-3UTR TCA 90 bp ACTTTCATCAATCTTCTCCAGCTCCAATTTCTTGTGCCCCTTCAACAGCATCTGACTCTTGACCTCAGGTaGCCCGCCTGCTTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: TFINLLQLQFLVPLQQHLTLDLR*PACFSL
Trigger: GAGGCTGAAGCAGGCGGGTCACCTGAGGTCAAGAGT...CAGATGCTGTTGAAGGGGCACAAGAAATTGGAGCTGGAGAAGATTGATGAAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257575.9
CDS-3UTR TCA 90 bp CCTCTCTTTCTTCTAATCCCGAGTCTCAGCAGCCCGGATGTCTTCCTAACACTCTCAGAATTCCAGGTCTaGCTCCCAGCAGACTGTTCT +
Preference number: 4 (lower is better)
Translates to: PLFLLIPSLSSPDVFLTLSEFQV*LPADCS
Trigger: AGAACAGTCTGCTGGGAGTCAGACCTGGAATTCTGA...GAGTGTTAGGAAGACATCCGGGCTGCTGAGACTCGGGATTAGAAGAAAGAGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257575.9
ENST00000407967.7
CDS-3UTR TCA 90 bp TTTGCAGGGGAAGGAGGCACGCACTATACCACAGAACGAGAGAGGAAGATGAAGTGGCTACAGGGAGGCTaGGTGACTTCCCAAAGTAAT +
Preference number: 4 (lower is better)
Translates to: FAGEGGTHYTTERERKMKWLQGG*VTSQSN
Trigger: ATTACTTTGGGAAGTCACTCAGCCTCCCTGTAGCCA...CTTCATCTTCCTCTCTCGTTCTGTGGTATAGTGCGTGCCTCCTTCCCCTGCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257575.9
CDS-3UTR GCA 90 bp CCAGGTCTGACTCCCAGCAGACTGTTCTATTTCCTTACACACCTGCACTTTCATTGGGGAGGCTGCCTCTaGCTTCAGACTCTCAAAGAC +
Preference number: 4 (lower is better)
Translates to: PGLTPSRLFYFLTHLHFHWGGCL*LQTLKD
Trigger: GTCTTTGAGAGTCTGAAGGCAGAGGCAGCCTCCCCA...ATGAAAGTGCAGGTGTGTAAGGAAATAGAACAGTCTGCTGGGAGTCAGACCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257575.9
ENST00000392549.7
ENST00000547718.5
CDS-3UTR GCA 90 bp TGTTTTGGTGGCATGGGCATAATTGGAGAAACCATTGGGGTATTCACTAGTAACCGCTGGTGGGGAGGCTaGCTCTGCCTTCAGACTCTC +
Preference number: 4 (lower is better)
Translates to: CFGGMGIIGETIGVFTSNRWWGG*LCLQTL
Trigger: GAGAGTCTGAAGGCAGAGGCAGCCTCCCCACCAGCG...GTTACTAGTGAATACCCCAATGGTTTCTCCAATTATGCCCATGCCACCAAAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000257575.9
ENST00000392549.7
ENST00000407967.7
ENST00000547718.5
CDS-3UTR GCA 90 bp AGCCTGTGTTGGAAACACTCCTCATCAGACACTGTTTTCCCTAGGACAGAAGTTTGCTGGCCATCCCGATaGACACAGCAATGCCGAGCT +
Preference number: 4 (lower is better)
Translates to: SLCWKHSSSDTVFPRTEVCWPSR*TQQCRA
Trigger: AGCTCGGCATTGCTGTGTGCATCGGGATGGCCAGCA...AACTTCTGTCCTAGGGAAAACAGTGTCTGATGAGGAGTGTTTCCAACACAGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257575.9
ENST00000407967.7
CDS-3UTR GCA 90 bp ACTTCCCAAAGTAATAAAGAGTTTGGAATCAGAATTCCAGGTCTGACTCCCAGCGCTTCTGTGCACTGCTaGCCGGTGGCTCGGACTCCA +
Preference number: 4 (lower is better)
Translates to: TSQSNKEFGIRIPGLTPSASVHC*PVARTP
Trigger: TGGAGTCCGAGCCACCGGGCAGCAGTGCACAGAAGC...GCTGGGAGTCAGACCTGGAATTCTGATTCCAAACTCTTTATTACTTTGGGAAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257575.9
ENST00000392549.7
ENST00000407967.7
ENST00000547718.5
CDS-3UTR GCA 90 bp TGTTTTGGTGGCATGGGCATAATTGGAGAAACCATTGGGGTATTCACTAGTAACCCAGCTTCTGTGCACTaGTGCCCGGTGGCTCGGACT +
Preference number: 4 (lower is better)
Translates to: CFGGMGIIGETIGVFTSNPASVH*CPVART
Trigger: AGTCCGAGCCACCGGGCAGCAGTGCACAGAAGCTGG...GTTACTAGTGAATACCCCAATGGTTTCTCCAATTATGCCCATGCCACCAAAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257575.9
ENST00000392549.7
ENST00000407967.7
ENST00000547718.5
CDS-3UTR GCA 90 bp ATCAATCTTCTCCAGCTCCAATTTCTTGTGCCCCTTCAACAGCATCTGCAGGCACACAGATGGTTACGGTaGTCCATGCCACTACCCTGG +
Preference number: 4 (lower is better)
Translates to: INLLQLQFLVPLQQHLQAHRWLR*SMPLPW
Trigger: CCAGGGTAGTGGCATGGAGCACCGTAACCATCTGTG...TGCCTGCAGATGCTGTTGAAGGGGCACAAGAAATTGGAGCTGGAGAAGATTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257575.9
CDS-3UTR GCA 90 bp CCTCTCTTTCTTCTAATCCCGAGTCTCAGCAGCCCGGATGTCTTCCTAACACTCGGAGAACAGAGCAGCTaGATTCACATGGCCCCATTT +
Preference number: 4 (lower is better)
Translates to: PLFLLIPSLSSPDVFLTLGEQSS*IHMAPF
Trigger: AAATGGGGCCATGTGAATGCAGCTGCTCTGTTCTCC...GAGTGTTAGGAAGACATCCGGGCTGCTGAGACTCGGGATTAGAAGAAAGAGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257575.9
CDS-3UTR CCA 90 bp TCCCAAAGTAATAAAGAGTTTGGAATCAGAATTCCAGGTCTGACTCCCAGCAGACGAGAAGAGCGCTGGTaGGGAGGCTGCCTCTGCCTT +
Preference number: 4 (lower is better)
Translates to: SQSNKEFGIRIPGLTPSRREERW*GGCLCL
Trigger: AAGGCAGAGGCAGCCTCCCCACCAGCGCTCTTCTCG...TCTGCTGGGAGTCAGACCTGGAATTCTGATTCCAAACTCTTTATTACTTTGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257575.9
ENST00000392549.7
ENST00000407967.7
ENST00000547718.5
CDS-3UTR CCA 90 bp CTGCACTTTCATCAATCTTCTCCAGCTCCAATTTCTTGTGCCCCTTCAACAGCACTCGAAGCGTGGAGTTaGCATAGGCGAAGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: LHFHQSSPAPISCAPSTALEAWS*HRRRCW
Trigger: CCAGCACCTTCGCCTATGCCAACTCCACGCTTCGAG...TGCTGTTGAAGGGGCACAAGAAATTGGAGCTGGAGAAGATTGATGAAAGTGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257575.9
ENST00000392549.7
ENST00000547718.5
CDS-3UTR CCA 90 bp TGTGCCCCTTCAACAGCATCTGCAGGCAGGATGATCTTTCCGATAAAAACCAGTCCTGTTCTCGAAGCGTaGAGTTGGCATAGGCGAAGG +
Preference number: 4 (lower is better)
Translates to: CAPSTASAGRMIFPIKTSPVLEA*SWHRRR
Trigger: CCTTCGCCTATGCCAACTCCACGCTTCGAGAACAGG...ACTGGTTTTTATCGGAAAGATCATCCTGCCTGCAGATGCTGTTGAAGGGGCACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257575.9
ENST00000392549.7
CDS-3UTR CCA 90 bp GTAGCCTGTGTTGGAAACACTCCTCATCAGACACTGTTTTCCCTAGGACAGAAGACTCGGCCTGACAGATaGCGCAGATGTCACCAGCTT +
Preference number: 4 (lower is better)
Translates to: VACVGNTPHQTLFSLGQKTRPDR*RRCHQL
Trigger: AAGCTGGTGACATCTGCGCCATCTGTCAGGCCGAGT...CTTCTGTCCTAGGGAAAACAGTGTCTGATGAGGAGTGTTTCCAACACAGGCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257575.9
ENST00000407967.7
CDS-3UTR CCA 90 bp CATTCTTCTCTTCCGAAGCTGATGCACCTATCATATCTGTGTCCAAAGCTTGCCAACTGCACTCCAGCCTaGGTGAAGACCCAGACCCTG +
Preference number: 4 (lower is better)
Translates to: HSSLPKLMHLSYLCPKLANCTPA*VKTQTL
Trigger: CAGGGTCTGGGTCTTCACCCAGGCTGGAGTGCAGTT...GGCAAGCTTTGGACACAGATATGATAGGTGCATCAGCTTCGGAAGAGAAGAATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257575.9
CDS-3UTR CCA 90 bp TTCTCTTCCGAAGCTGATGCACCTATCATATCTGTGTCCAAAGCTTGCCTTTCTTGGGTTCCGTCACCCTaGAGATGGCTACAGGGAGGC +
Preference number: 4 (lower is better)
Translates to: FSSEADAPIISVSKACLSWVPSP*RWLQGG
Trigger: GCCTCCCTGTAGCCATCTCCAGGGTGACGGAACCCA...AGAAAGGCAAGCTTTGGACACAGATATGATAGGTGCATCAGCTTCGGAAGAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257575.9
ENST00000407967.7
CDS-3UTR CCA 90 bp ATCAATCTTCTCCAGCTCCAATTTCTTGTGCCCCTTCAACAGCATCTGCAGGCATCCAACGGGGACTCCTaGCTGCTTTCGCACTGGTAT +
Preference number: 4 (lower is better)
Translates to: INLLQLQFLVPLQQHLQASNGDS*LLSHWY
Trigger: ATACCAGTGCGAAAGCAGCCAGGAGTCCCCGTTGGA...TGCCTGCAGATGCTGTTGAAGGGGCACAAGAAATTGGAGCTGGAGAAGATTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257575.9
CDS-3UTR CCA 90 bp GCCCTTGTGGCTTTGCGATGCCTGGGTAACTCCCAGCCCTGCTTTAAAACTCAGAACCATAATCCTCCTTaGTACACAACACCAGTGACC +
Preference number: 4 (lower is better)
Translates to: ALVALRCLGNSQPCFKTQNHNPP*YTTPVT
Trigger: GGTCACTGGTGTTGTGTACCAAGGAGGATTATGGTT...CTGAGTTTTAAAGCAGGGCTGGGAGTTACCCAGGCATCGCAAAGCCACAAGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677328.1
CDS-3UTR CCA 90 bp TTAGAGTCTGGTGGGAATGGGATGTTCAGGAGTTATCTGGAAAAACGCACACCCCTATCGCTCTCCACCTaGAAATGGTCTGGGGGCTGT +
Preference number: 4 (lower is better)
Translates to: LESGGNGMFRSYLEKRTPLSLST*KWSGGC
Trigger: ACAGCCCCCAGACCATTTCCAGGTGGAGAGCGATAG...GGGTGTGCGTTTTTCCAGATAACTCCTGAACATCCCATTCCCACCAGACTCTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000677328.1
CDS-3UTR CCA 90 bp TGCTCATCACTTTATTTGAGAGTCACTCACTCACCTACCCTGAGCCACTGGGCACTTATTCTGCCCCCATaGAGCTTAGAGTCTGGTGGG +
Preference number: 4 (lower is better)
Translates to: CSSLYLRVTHSPTLSHWALILPP*SLESGG
Trigger: CCCACCAGACTCTAAGCTCCATGGGGGCAGAATAAG...TGCCCAGTGGCTCAGGGTAGGTGAGTGAGTGACTCTCAAATAAAGTGATGAGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000677328.1
CDS-3UTR TCA 90 bp CCAGGTCTGACTCCCAGCAGACTGTTCTATTTCCTTACACACCTGCACTTTCATCCAGGATCCACAAGATaGCCAGCACTGACCTCTTCT +
Preference number: 4 (lower is better)
Translates to: PGLTPSRLFYFLTHLHFHPGSTR*PALTSS
Trigger: AGAAGAGGTCAGTGCTGGTCATCTTGTGGATCCTGG...ATGAAAGTGCAGGTGTGTAAGGAAATAGAACAGTCTGCTGGGAGTCAGACCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257575.9
ENST00000392549.7
ENST00000547718.5
CDS-3UTR TCA 90 bp AAGAAAACCTCAGATGGGACGTTCCCCCAGAGGGTAGGGCATGCACTAATAAAAGGCGAGCTGATCATTTaGGGTCAAGAGTTGGAGACC +
Preference number: 4 (lower is better)
Translates to: KKTSDGTFPQRVGHALIKGELII*GQELET
Trigger: GGTCTCCAACTCTTGACCTCAAATGATCAGCTCGCC...TTTTATTAGTGCATGCCCTACCCTCTGGGGGAACGTCCCATCTGAGGTTTTCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000257575.9
CDS-3UTR TCA 90 bp CATTCTTCTCTTCCGAAGCTGATGCACCTATCATATCTGTGTCCAAAGCTTGCCGGTTGCAGTGAGCTGTaGTTGTGCCAACTGCACTCC +
Preference number: 4 (lower is better)
Translates to: HSSLPKLMHLSYLCPKLAGCSEL*LCQLHS
Trigger: GGAGTGCAGTTGGCACAATCACAGCTCACTGCAACC...GGCAAGCTTTGGACACAGATATGATAGGTGCATCAGCTTCGGAAGAGAAGAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257575.9
CDS-3UTR TCA 90 bp GAGAGTCACTCACTCACCTACCCTGAGCCACTGGGCAGATTCTTATTCTGCCCCGCTCATCACTTTATTTaGGAGTCACTCACTCACCTA +
Preference number: 4 (lower is better)
Translates to: ESHSLTYPEPLGRFLFCPAHHFI*ESLTHL
Trigger: TAGGTGAGTGAGTGACTCTCAAATAAAGTGATGAGC...GGGGCAGAATAAGAATCTGCCCAGTGGCTCAGGGTAGGTGAGTGAGTGACTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677328.1
CDS-3UTR GCA 90 bp TTTCATCAATCTTCTCCAGCTCCAATTTCTTGTGCCCCTTCAACAGCATCTGCAAGCTGGTGGGGAGGCTaGCTGATAAGCCCGAGAAGA +
Preference number: 4 (lower is better)
Translates to: FHQSSPAPISCAPSTASASWWGG*LISPRR
Trigger: TCTTCTCGGGCTTATCAGGCAGCCTCCCCACCAGCT...TGCAGATGCTGTTGAAGGGGCACAAGAAATTGGAGCTGGAGAAGATTGATGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257575.9
ENST00000392549.7
CDS-3UTR GCA 90 bp TTCTCTTCCGAAGCTGATGCACCTATCATATCTGTGTCCAAAGCTTGCCTTTCTAGCTGGTGGGGAGGCTaGCTGATAAGCCCGAGAAGA +
Preference number: 4 (lower is better)
Translates to: FSSEADAPIISVSKACLSSWWGG*LISPRR
Trigger: TCTTCTCGGGCTTATCAGGCAGCCTCCCCACCAGCT...AGAAAGGCAAGCTTTGGACACAGATATGATAGGTGCATCAGCTTCGGAAGAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257575.9
ENST00000407967.7
CDS-3UTR GCA 90 bp GATTGTAACATCATGGCCATCGCCATAGTAACGGAGCTTGAAAGATGCTACACTTGGCATAGGCGAAGGTaGTGGCCATCCCGATGCACA +
Preference number: 4 (lower is better)
Translates to: DCNIMAIAIVTELERCYTWHRRR*WPSRCT
Trigger: TGTGCATCGGGATGGCCAGCACCTTCGCCTATGCCA...AGTGTAGCATCTTTCAAGCTCCGTTACTATGGCGATGGCCATGATGTTACAATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257575.9
ENST00000392549.7
CDS-3UTR GCA 90 bp TCTGCAGGCAGGATGATCTTTCCGATAAAAACCAGTTGCAGAAGTTCCTGTTGCTTAGAAGACCGTGTCTaGTGGGCCCCATGCCTGGAA +
Preference number: 4 (lower is better)
Translates to: SAGRMIFPIKTSCRSSCCLEDRV*WAPCLE
Trigger: TTCCAGGCATGGGGCCCAGCAGACACGGTCTTCTAA...GCAACAGGAACTTCTGCAACTGGTTTTTATCGGAAAGATCATCCTGCCTGCAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000257575.9
CDS-3UTR GCA 90 bp TGTGCCCCTTCAACAGCATCTGCAGGCAGGATGATCTTTCCGATAAAAACCAGTTTCAGCCTCCCAAAATaGTGGCACTACAGGCATGGG +
Preference number: 4 (lower is better)
Translates to: CAPSTASAGRMIFPIKTSFSLPK*WHYRHG
Trigger: CCCATGCCTGTAGTGCCAGCATTTTGGGAGGCTGAA...ACTGGTTTTTATCGGAAAGATCATCCTGCCTGCAGATGCTGTTGAAGGGGCACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000257575.9
CDS-3UTR GCA 90 bp AGCATCTGCAGGCAGGATGATCTTTCCGATAAAAACCAGTTGCAGAAGTTCCTGCTAAACCATCCCATCTaGCCCTGTGTGTCCCCCACA +
Preference number: 4 (lower is better)
Translates to: SICRQDDLSDKNQLQKFLLNHPI*PCVSPT
Trigger: TGTGGGGGACACACAGGGGCAGATGGGATGGTTTAG...CAGGAACTTCTGCAACTGGTTTTTATCGGAAAGATCATCCTGCCTGCAGATGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000257575.9
CDS-3UTR GCA 90 bp TTCTCTTCCGAAGCTGATGCACCTATCATATCTGTGTCCAAAGCTTGCCTTTCTACGGGGACTCCTGGCTaGTTTCGCACTGGTATAGGG +
Preference number: 4 (lower is better)
Translates to: FSSEADAPIISVSKACLSTGTPG*FRTGIG
Trigger: CCCTATACCAGTGCGAAAGCAGCCAGGAGTCCCCGT...AGAAAGGCAAGCTTTGGACACAGATATGATAGGTGCATCAGCTTCGGAAGAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257575.9
ENST00000407967.7
CDS-3UTR GCA 90 bp CCCATGGAGCTTAGAGTCTGGTGGGAATGGGATGTTCAGGAGTTATCTGGAAAAGAACTCAGGGGAGGGTaGAAATCCAGTGTGCAGACT +
Preference number: 4 (lower is better)
Translates to: PMELRVWWEWDVQELSGKELRGG*KSSVQT
Trigger: AGTCTGCACACTGGATTTGCACCCTCCCCTGAGTTC...TTTTCCAGATAACTCCTGAACATCCCATTCCCACCAGACTCTAAGCTCCATGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677328.1
CDS-3UTR CCA 90 bp TTTGGAATCAGAATTCCAGGTCTGACTCCCAGCAGACTGTTCTATTTCCTTACATGGAGGGGAACGAGCTaGTGGGGAGGCTGCCTGATA +
Preference number: 4 (lower is better)
Translates to: FGIRIPGLTPSRLFYFLTWRGTS*WGGCLI
Trigger: TATCAGGCAGCCTCCCCACCAGCTCGTTCCCCTCCA...TGTAAGGAAATAGAACAGTCTGCTGGGAGTCAGACCTGGAATTCTGATTCCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000257575.9
ENST00000392549.7
ENST00000547718.5
CDS-3UTR CCA 90 bp ATATTTTACATGAAGAGGTCCATTTCTAAGGACTTCGTGGAACTTGAGTCAGTGAGCCCAGCACCAGGCTaGAGGGGAACGAGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: IFYMKRSISKDFVELESVSPAPG*RGTSWW
Trigger: CCACCAGCTCGTTCCCCTCCAGCCTGGTGCTGGGCT...CACTGACTCAAGTTCCACGAAGTCCTTAGAAATGGACCTCTTCATGTAAAATAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257575.9
ENST00000407967.7
CDS-3UTR CCA 90 bp ATATTTTACATGAAGAGGTCCATTTCTAAGGACTTCGTGGAACTTGAGTCAGTGCCGCCATGGTGGAAATaGTGGTGGGGCTGGCGGTGG +
Preference number: 4 (lower is better)
Translates to: IFYMKRSISKDFVELESVPPWWK*WWGWRW
Trigger: CCACCGCCAGCCCCACCACCATTTCCACCATGGCGG...CACTGACTCAAGTTCCACGAAGTCCTTAGAAATGGACCTCTTCATGTAAAATAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257575.9
ENST00000407967.7
CDS-3UTR CCA 90 bp GATTATTCAGGCAAGTGGGATTGTAACATCATGGCCATCGCCATAGTAACGGAGAAGGGGAGTCCTTTCTaGAGCCAGCAGATCACAGCC +
Preference number: 4 (lower is better)
Translates to: DYSGKWDCNIMAIAIVTEKGSPF*SQQITA
Trigger: GGCTGTGATCTGCTGGCTCCAGAAAGGACTCCCCTT...CTCCGTTACTATGGCGATGGCCATGATGTTACAATCCCACTTGCCTGAATAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257575.9
ENST00000392549.7
CDS-3UTR CCA 90 bp AATCAGAATTCCAGGTCTGACTCCCAGCAGACTGTTCTATTTCCTTACACACCTCATAGGCGAAGGTGCTaGCCATCCCGATGCACACAG +
Preference number: 4 (lower is better)
Translates to: NQNSRSDSQQTVLFPYTPHRRRC*PSRCTQ
Trigger: CTGTGTGCATCGGGATGGCCAGCACCTTCGCCTATG...AGGTGTGTAAGGAAATAGAACAGTCTGCTGGGAGTCAGACCTGGAATTCTGATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257575.9
ENST00000392549.7
ENST00000547718.5
CDS-3UTR CCA 90 bp TTTCATCAATCTTCTCCAGCTCCAATTTCTTGTGCCCCTTCAACAGCATCTGCACTCGAAGCGTGGAGTTaGCATAGGCGAAGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: FHQSSPAPISCAPSTASALEAWS*HRRRCW
Trigger: CCAGCACCTTCGCCTATGCCAACTCCACGCTTCGAG...TGCAGATGCTGTTGAAGGGGCACAAGAAATTGGAGCTGGAGAAGATTGATGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257575.9
ENST00000392549.7
CDS-3UTR CCA 90 bp TGGAGAAGTGGCTCTGTCATAGAGATCACAGAAGCACAGATGGTTACGGTGCTCTATTTGTACCACAGCTaGATGGGGACAAGGGATCGG +
Preference number: 4 (lower is better)
Translates to: WRSGSVIEITEAQMVTVLYLYHS*MGTRDR
Trigger: CCGATCCCTTGTCCCCATCCAGCTGTGGTACAAATA...GAGCACCGTAACCATCTGTGCTTCTGTGATCTCTATGACAGAGCCACTTCTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257575.9
CDS-3UTR CCA 90 bp TTTGGAATCAGAATTCCAGGTCTGACTCCCAGCAGACTGTTCTATTTCCTTACAGGGCATGCTGACCCTTaGCGTCCTTCTGGGTGTCCT +
Preference number: 4 (lower is better)
Translates to: FGIRIPGLTPSRLFYFLTGHADP*RPSGCP
Trigger: AGGACACCCAGAAGGACGCCAAGGGTCAGCATGCCC...TGTAAGGAAATAGAACAGTCTGCTGGGAGTCAGACCTGGAATTCTGATTCCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257575.9
CDS-3UTR CCA 90 bp TGTTTTGGTGGCATGGGCATAATTGGAGAAACCATTGGGGTATTCACTAGTAACTGGGTTCCGTCACCCTaGAGATGGCTACAGGGAGGC +
Preference number: 4 (lower is better)
Translates to: CFGGMGIIGETIGVFTSNWVPSP*RWLQGG
Trigger: GCCTCCCTGTAGCCATCTCCAGGGTGACGGAACCCA...GTTACTAGTGAATACCCCAATGGTTTCTCCAATTATGCCCATGCCACCAAAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257575.9
ENST00000392549.7
ENST00000407967.7
ENST00000547718.5
CDS-3UTR CCA 90 bp TTACCTCTCTTTCTTCTAATCCCGAGTCTCAGCAGCCCGGATGTCTTCCTAACACAGCAGGTAATACACTaGGTTCCGTCACCCTGGAGA +
Preference number: 4 (lower is better)
Translates to: LPLFLLIPSLSSPDVFLTQQVIH*VPSPWR
Trigger: TCTCCAGGGTGACGGAACCCAGTGTATTACCTGCTG...TGTTAGGAAGACATCCGGGCTGCTGAGACTCGGGATTAGAAGAAAGAGAGGTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257575.9
ENST00000407967.7
CDS-3UTR CCA 90 bp ATCTTGGGCAGGGCCACGATGAGGCACTTGAGGGCGATGGTGATGTACTTCAGATGGCATGGGCATAATTaGAGAAACCATTGGGGTATT +
Preference number: 4 (lower is better)
Translates to: ILGRATMRHLRAMVMYFRWHGHN*RNHWGI
Trigger: AATACCCCAATGGTTTCTCCAATTATGCCCATGCCA...TCTGAAGTACATCACCATCGCCCTCAAGTGCCTCATCGTGGCCCTGCCCAAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547718.5
CDS-3UTR CCA 90 bp CAGCTTCTGTGCACTGCTGCCCGGTGGCTCGGACTCCATAGTTCTGAGAGGTACGTTTTATTGTTTTGGTaGCATGGGCATAATTGGAGA +
Preference number: 4 (lower is better)
Translates to: QLLCTAARWLGLHSSERYVLLFW*HGHNWR
Trigger: TCTCCAATTATGCCCATGCCACCAAAACAATAAAAC...GTACCTCTCAGAACTATGGAGTCCGAGCCACCGGGCAGCAGTGCACAGAAGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547718.5
CDS-3UTR CCA 90 bp CTGCACTTTCATCAATCTTCTCCAGCTCCAATTTCTTGTGCCCCTTCAACAGCATCCTTGGCGTCCTTCTaGGTGTCCTCAGTGTTCGGT +
Preference number: 4 (lower is better)
Translates to: LHFHQSSPAPISCAPSTASLASF*VSSVFG
Trigger: ACCGAACACTGAGGACACCCAGAAGGACGCCAAGGA...TGCTGTTGAAGGGGCACAAGAAATTGGAGCTGGAGAAGATTGATGAAAGTGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392549.7
CDS-3UTR CCA 90 bp CCCATGATGTATTTGTACCACAGCTGGATGGGGACAAGGGATCGGAACAGCTGGGTCACAGCTTTCAGGTaGAATGTTATCCGTGTTGCT +
Preference number: 4 (lower is better)
Translates to: PMMYLYHSWMGTRDRNSWVTAFR*NVIRVA
Trigger: AGCAACACGGATAACATTCCACCTGAAAGCTGTGAC...CCAGCTGTTCCGATCCCTTGTCCCCATCCAGCTGTGGTACAAATACATCATGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547718.5
CDS-3UTR CCA 90 bp CTTGTGGCTTTGCGATGCCTGGGTAACTCCCAGCCCTGCTTTAAAACTCAGCTCAGAGTCTGGTGGGAATaGGATGTTCAGGAGTTATCT +
Preference number: 4 (lower is better)
Translates to: LVALRCLGNSQPCFKTQLRVWWE*DVQELS
Trigger: AGATAACTCCTGAACATCCCATTCCCACCAGACTCT...GAGCTGAGTTTTAAAGCAGGGCTGGGAGTTACCCAGGCATCGCAAAGCCACAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677328.1
3UTR CAA 72 bp ATCCATAGCAGGTCAAAGAAGTCCAGCATCTCCAGGTaGGGCTTCAGGAATATGAGGCTGTTGTACAGCTGC +
Preference number: 4 (lower is better)
Translates to: IHSRSKKSSISR*GFRNMRLLYSC
Trigger: GCAGCTGTACAACAGCCTCATATTCCTGAAGCCCAACCTGGAGATGCTGGACTTCTTTGACCTGCTATGGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547718.5
CDS-3UTR TCA 90 bp GATTGTAACATCATGGCCATCGCCATAGTAACGGAGCTTGAAAGATGCTACACTATCCTCAGGGGGATGTaGCCAATGGATCCCAGAGAG +
Preference number: 4 (lower is better)
Translates to: DCNIMAIAIVTELERCYTILRGM*PMDPRE
Trigger: CTCTCTGGGATCCATTGGTCACATCCCCCTGAGGAT...AGTGTAGCATCTTTCAAGCTCCGTTACTATGGCGATGGCCATGATGTTACAATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257575.9
ENST00000392549.7
CDS-3UTR TCA 90 bp AGAGTCTGGTGGGAATGGGATGTTCAGGAGTTATCTGGAAAAACGCACACCCCGACAGCTGCTGGGAGCTaGATGTATAAAGCACATAGA +
Preference number: 4 (lower is better)
Translates to: RVWWEWDVQELSGKTHTPTAAGS*MYKAHR
Trigger: TCTATGTGCTTTATACATTCAGCTCCCAGCAGCTGT...CGGGGTGTGCGTTTTTCCAGATAACTCCTGAACATCCCATTCCCACCAGACTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000677328.1
CDS-3UTR TCA 90 bp AGCCTGTGTTGGAAACACTCCTCATCAGACACTGTTTTCCCTAGGACAGAAGTTGGCTCAGCTCCTCGATaGCCAGATAGAACTTTCCCT +
Preference number: 4 (lower is better)
Translates to: SLCWKHSSSDTVFPRTEVGSAPR*PDRTFP
Trigger: AGGGAAAGTTCTATCTGGTCATCGAGGAGCTGAGCC...AACTTCTGTCCTAGGGAAAACAGTGTCTGATGAGGAGTGTTTCCAACACAGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257575.9
ENST00000407967.7
CDS-3UTR TCA 90 bp CCAGGTCTGACTCCCAGCAGACTGTTCTATTTCCTTACACACCTGCACTTTCATGTATTGCCAGGTCCTTaGCTTGGAGTGGAGAAGGAA +
Preference number: 4 (lower is better)
Translates to: PGLTPSRLFYFLTHLHFHVLPGP*LGVEKE
Trigger: TTCCTTCTCCACTCCAAGTCAAGGACCTGGCAATAC...ATGAAAGTGCAGGTGTGTAAGGAAATAGAACAGTCTGCTGGGAGTCAGACCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257575.9
CDS-3UTR TCA 90 bp CCCATGGAGCTTAGAGTCTGGTGGGAATGGGATGTTCAGGAGTTATCTGGAAAATGTGAGCTTTCAGCGTaGAACTCCTGGTCTGCAGAA +
Preference number: 4 (lower is better)
Translates to: PMELRVWWEWDVQELSGKCELSA*NSWSAE
Trigger: TTCTGCAGACCAGGAGTTTCACGCTGAAAGCTCACA...TTTTCCAGATAACTCCTGAACATCCCATTCCCACCAGACTCTAAGCTCCATGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677328.1
CDS-3UTR GCA 90 bp CCCTTCAACAGCATCTGCAGGCAGGATGATCTTTCCGATAAAAACCAGTTGCAGGAATGTTATCCGTGTTaGTGCTGTGGCGTCTCTGCA +
Preference number: 4 (lower is better)
Translates to: PFNSICRQDDLSDKNQLQECYPC*CCGVSA
Trigger: TGCAGAGACGCCACAGCAGCAACACGGATAACATTC...CTGCAACTGGTTTTTATCGGAAAGATCATCCTGCCTGCAGATGCTGTTGAAGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257575.9
ENST00000392549.7
CDS-3UTR GCA 90 bp ACTTCCCAAAGTAATAAAGAGTTTGGAATCAGAATTCCAGGTCTGACTCCCAGCAGCTGGTGGGGAGGCTaGCTGATAAGCCCGAGAAGA +
Preference number: 4 (lower is better)
Translates to: TSQSNKEFGIRIPGLTPSSWWGG*LISPRR
Trigger: TCTTCTCGGGCTTATCAGGCAGCCTCCCCACCAGCT...GCTGGGAGTCAGACCTGGAATTCTGATTCCAAACTCTTTATTACTTTGGGAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257575.9
ENST00000392549.7
ENST00000407967.7
ENST00000547718.5
CDS-3UTR GCA 90 bp CCCTTCAACAGCATCTGCAGGCAGGATGATCTTTCCGATAAAAACCAGTTGCAGCGATGCACACAGCAATaGCGAGCTTATGCTGAAAGC +
Preference number: 4 (lower is better)
Translates to: PFNSICRQDDLSDKNQLQRCTQQ*RAYAES
Trigger: GCTTTCAGCATAAGCTCGGCATTGCTGTGTGCATCG...CTGCAACTGGTTTTTATCGGAAAGATCATCCTGCCTGCAGATGCTGTTGAAGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257575.9
ENST00000392549.7
CDS-3UTR GCA 90 bp TTTGGAATCAGAATTCCAGGTCTGACTCCCAGCAGACTGTTCTATTTCCTTACATGCTGGCCATCCCGATaGACACAGCAATGCCGAGCT +
Preference number: 4 (lower is better)
Translates to: FGIRIPGLTPSRLFYFLTCWPSR*TQQCRA
Trigger: AGCTCGGCATTGCTGTGTGCATCGGGATGGCCAGCA...TGTAAGGAAATAGAACAGTCTGCTGGGAGTCAGACCTGGAATTCTGATTCCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257575.9
ENST00000392549.7
ENST00000547718.5
CDS-3UTR GCA 90 bp GACTGTTCTATTTCCTTACACACCTGCACTTTCATCAATCTTCTCCAGCTCCAATGCTGGCCATCCCGATaGACACAGCAATGCCGAGCT +
Preference number: 4 (lower is better)
Translates to: DCSISLHTCTFINLLQLQCWPSR*TQQCRA
Trigger: AGCTCGGCATTGCTGTGTGCATCGGGATGGCCAGCA...TTGGAGCTGGAGAAGATTGATGAAAGTGCAGGTGTGTAAGGAAATAGAACAGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257575.9
ENST00000392549.7
ENST00000547718.5
CDS-3UTR GCA 90 bp TGTGTTGGAAACACTCCTCATCAGACACTGTTTTCCCTAGGACAGAAGTTAAATTGTCACCAGCTTCTGTaGACTGCTGCCCGGTGGCTC +
Preference number: 4 (lower is better)
Translates to: CVGNTPHQTLFSLGQKLNCHQLL*TAARWL
Trigger: GAGCCACCGGGCAGCAGTGCACAGAAGCTGGTGACA...ATTTAACTTCTGTCCTAGGGAAAACAGTGTCTGATGAGGAGTGTTTCCAACACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257575.9
ENST00000407967.7
CDS-3UTR GCA 90 bp CCAACAGATGGTATTTATTGGCTGAAGGGTACTTTGGGAGACATTAAAACACCACCAGGAGGTGGAGGTTaGAGCGAGCCGAGATTGTGC +
Preference number: 4 (lower is better)
Translates to: PTDGIYWLKGTLGDIKTPPGGGG*SEPRLC
Trigger: GCACAATCTCGGCTCGCTGCAACCTCCACCTCCTGG...TGGTGTTTTAATGTCTCCCAAAGTACCCTTCAGCCAATAAATACCATCTGTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257575.9
CDS-3UTR GCA 90 bp AAGAAAACCTCAGATGGGACGTTCCCCCAGAGGGTAGGGCATGCACTAATAAAAACGGAGCTTGAAAGATaGTACACTGCCCTGGAACAG +
Preference number: 4 (lower is better)
Translates to: KKTSDGTFPQRVGHALIKTELER*YTALEQ
Trigger: CTGTTCCAGGGCAGTGTAGCATCTTTCAAGCTCCGT...TTTTATTAGTGCATGCCCTACCCTCTGGGGGAACGTCCCATCTGAGGTTTTCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000257575.9
CDS-3UTR GCA 90 bp GAGAAGTGGCTCTGTCATAGAGATCACAGAAGCACAGATGGTTACGGTGCTCCAAGCTCCAATTTCTTGTaGCCCTTCAACAGCATCTGC +
Preference number: 4 (lower is better)
Translates to: EKWLCHRDHRSTDGYGAPSSNFL*PFNSIC
Trigger: GCAGATGCTGTTGAAGGGGCACAAGAAATTGGAGCT...TGGAGCACCGTAACCATCTGTGCTTCTGTGATCTCTATGACAGAGCCACTTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257575.9
CDS-3UTR CCA 90 bp TGTTTTGGTGGCATGGGCATAATTGGAGAAACCATTGGGGTATTCACTAGTAACTCGGAGCTGAGCGCCTaGCTGCGGTTTCTTTCAGGT +
Preference number: 4 (lower is better)
Translates to: CFGGMGIIGETIGVFTSNSELSA*LRFLSG
Trigger: ACCTGAAAGAAACCGCAGCCAGGCGCTCAGCTCCGA...GTTACTAGTGAATACCCCAATGGTTTCTCCAATTATGCCCATGCCACCAAAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000257575.9
ENST00000392549.7
ENST00000407967.7
CDS-3UTR CCA 90 bp ATAAGGGCAGGATACTGTGAACCTGATACTCGATTAACCCTACTTACAACAAATCGAGAAGAGCGCTGGTaGGGAGGCTGCCTCTGCCTT +
Preference number: 4 (lower is better)
Translates to: IRAGYCEPDTRLTLLTTNREERW*GGCLCL
Trigger: AAGGCAGAGGCAGCCTCCCCACCAGCGCTCTTCTCG...ATTTGTTGTAAGTAGGGTTAATCGAGTATCAGGTTCACAGTATCCTGCCCTTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257575.9
ENST00000407967.7
CDS-3UTR CCA 90 bp TTCTCTTCCGAAGCTGATGCACCTATCATATCTGTGTCCAAAGCTTGCCTTTCTAAGGGGAGTCCTTTCTaGAGCCAGCAGATCACAGCC +
Preference number: 4 (lower is better)
Translates to: FSSEADAPIISVSKACLSKGSPF*SQQITA
Trigger: GGCTGTGATCTGCTGGCTCCAGAAAGGACTCCCCTT...AGAAAGGCAAGCTTTGGACACAGATATGATAGGTGCATCAGCTTCGGAAGAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257575.9
ENST00000407967.7
CDS-3UTR CCA 90 bp AGAGAGCCAGGGATGCCAAGCCAAGGGGAAAGTCCTGGTTTGGTGGCACACAGGAGTTTGAATCTAGCCTaGACAACCTGGATTTTTATT +
Preference number: 4 (lower is better)
Translates to: REPGMPSQGESPGLVAHRSLNLA*TTWIFI
Trigger: AATAAAAATCCAGGTTGTCCAGGCTAGATTCAAACT...CCTGTGTGCCACCAAACCAGGACTTTCCCCTTGGCTTGGCATCCCTGGCTCTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000257575.9
CDS-3UTR CCA 90 bp TGTTTTGGTGGCATGGGCATAATTGGAGAAACCATTGGGGTATTCACTAGTAACGTAGTTGCAGCTGCTTaGGAGGCTGAGGAGGGAGGA +
Preference number: 4 (lower is better)
Translates to: CFGGMGIIGETIGVFTSNVVAAA*EAEEGG
Trigger: TCCTCCCTCCTCAGCCTCCCAAGCAGCTGCAACTAC...GTTACTAGTGAATACCCCAATGGTTTCTCCAATTATGCCCATGCCACCAAAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257575.9
CDS-3UTR CCA 90 bp AATCAGAATTCCAGGTCTGACTCCCAGCAGACTGTTCTATTTCCTTACACACCTCAGGCAAGATTCTGGTaGCTTCTGCGTGGTCACCTG +
Preference number: 4 (lower is better)
Translates to: NQNSRSDSQQTVLFPYTPQARFW*LLRGHL
Trigger: CAGGTGACCACGCAGAAGCCACCAGAATCTTGCCTG...AGGTGTGTAAGGAAATAGAACAGTCTGCTGGGAGTCAGACCTGGAATTCTGATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257575.9
CDS-3UTR CCA 90 bp ACTTTCATCAATCTTCTCCAGCTCCAATTTCTTGTGCCCCTTCAACAGCATCTGGATGCTACACTGCCCTaGAACAGACGTCTTGCTGGG +
Preference number: 4 (lower is better)
Translates to: TFINLLQLQFLVPLQQHLDATLP*NRRLAG
Trigger: CCCAGCAAGACGTCTGTTCCAGGGCAGTGTAGCATC...CAGATGCTGTTGAAGGGGCACAAGAAATTGGAGCTGGAGAAGATTGATGAAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257575.9
ENST00000392549.7
CDS-3UTR CCA 90 bp ACTGTTCTATTTCCTTACACACCTGCACTTTCATCAATCTTCTCCAGCTCCAATTGGGTTCCGTCACCCTaGAGATGGCTACAGGGAGGC +
Preference number: 4 (lower is better)
Translates to: TVLFPYTPALSSIFSSSNWVPSP*RWLQGG
Trigger: GCCTCCCTGTAGCCATCTCCAGGGTGACGGAACCCA...ATTGGAGCTGGAGAAGATTGATGAAAGTGCAGGTGTGTAAGGAAATAGAACAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257575.9
ENST00000392549.7
ENST00000547718.5
CDS-3UTR CCA 90 bp CATTCTTCTCTTCCGAAGCTGATGCACCTATCATATCTGTGTCCAAAGCTTGCCGAAGAAAACCTCAGATaGGACGTTCCCCCAGAGGGT +
Preference number: 4 (lower is better)
Translates to: HSSLPKLMHLSYLCPKLAEENLR*DVPPEG
Trigger: ACCCTCTGGGGGAACGTCCCATCTGAGGTTTTCTTC...GGCAAGCTTTGGACACAGATATGATAGGTGCATCAGCTTCGGAAGAGAAGAATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257575.9
ENST00000407967.7
CDS-3UTR CCA 90 bp CCTCTCTTTCTTCTAATCCCGAGTCTCAGCAGCCCGGATGTCTTCCTAACACTCTGGCTGCTTTCGCACTaGTATAGGGGAATTCATGTA +
Preference number: 4 (lower is better)
Translates to: PLFLLIPSLSSPDVFLTLWLLSH*YRGIHV
Trigger: TACATGAATTCCCCTATACCAGTGCGAAAGCAGCCA...GAGTGTTAGGAAGACATCCGGGCTGCTGAGACTCGGGATTAGAAGAAAGAGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257575.9
ENST00000407967.7
CDS-3UTR CCA 90 bp TTAGAGTCTGGTGGGAATGGGATGTTCAGGAGTTATCTGGAAAAACGCACACCCGTCTCTGCTGGGGACTaGTTTAGGTGTCCATTCTCT +
Preference number: 4 (lower is better)
Translates to: LESGGNGMFRSYLEKRTPVSAGD*FRCPFS
Trigger: AGAGAATGGACACCTAAACCAGTCCCCAGCAGAGAC...GGGTGTGCGTTTTTCCAGATAACTCCTGAACATCCCATTCCCACCAGACTCTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000677328.1
3UTR CAA 72 bp CCTGCACTTTCATCAATCTTCTCCAGCTCCAATTTCTaGTGCCCCTTCAACAGCATCTGGCACAGGAGAATC +
Preference number: 4 (lower is better)
Translates to: PALSSIFSSSNF*CPFNSIWHRRI
Trigger: GATTCTCCTGTGCCAGATGCTGTTGAAGGGGCACAAGAAATTGGAGCTGGAGAAGATTGATGAAAGTGCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547718.5
CDS-3UTR TCA 90 bp TCCCAAAGTAATAAAGAGTTTGGAATCAGAATTCCAGGTCTGACTCCCAGCAGAATCCTCAGGGGGATGTaGCCAATGGATCCCAGAGAG +
Preference number: 4 (lower is better)
Translates to: SQSNKEFGIRIPGLTPSRILRGM*PMDPRE
Trigger: CTCTCTGGGATCCATTGGTCACATCCCCCTGAGGAT...TCTGCTGGGAGTCAGACCTGGAATTCTGATTCCAAACTCTTTATTACTTTGGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000257575.9
ENST00000392549.7
ENST00000407967.7
ENST00000547718.5
CDS-3UTR TCA 90 bp ATCAATCTTCTCCAGCTCCAATTTCTTGTGCCCCTTCAACAGCATCTGCAGGCAACACCTGATTCACTGTaGAGAGCCACATGGACTTCA +
Preference number: 4 (lower is better)
Translates to: INLLQLQFLVPLQQHLQATPDSL*RATWTS
Trigger: TGAAGTCCATGTGGCTCTTCACAGTGAATCAGGTGT...TGCCTGCAGATGCTGTTGAAGGGGCACAAGAAATTGGAGCTGGAGAAGATTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257575.9
ENST00000392549.7
CDS-3UTR TCA 90 bp AATCAGAATTCCAGGTCTGACTCCCAGCAGACTGTTCTATTTCCTTACACACCTATGCCGAGCTTATGCTaGAAGCACAGTTTGGCCAGG +
Preference number: 4 (lower is better)
Translates to: NQNSRSDSQQTVLFPYTPMPSLC*KHSLAR
Trigger: CCTGGCCAAACTGTGCTTTCAGCATAAGCTCGGCAT...AGGTGTGTAAGGAAATAGAACAGTCTGCTGGGAGTCAGACCTGGAATTCTGATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257575.9
ENST00000392549.7
ENST00000547718.5
CDS-3UTR TCA 90 bp ACTTTCATCAATCTTCTCCAGCTCCAATTTCTTGTGCCCCTTCAACAGCATCTGCCAGGATCCACAAGATaGCCAGCACTGACCTCTTCT +
Preference number: 4 (lower is better)
Translates to: TFINLLQLQFLVPLQQHLPGSTR*PALTSS
Trigger: AGAAGAGGTCAGTGCTGGTCATCTTGTGGATCCTGG...CAGATGCTGTTGAAGGGGCACAAGAAATTGGAGCTGGAGAAGATTGATGAAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257575.9
ENST00000392549.7
ENST00000547718.5
CDS-3UTR TCA 90 bp AGCCTGTGTTGGAAACACTCCTCATCAGACACTGTTTTCCCTAGGACAGAAGTTTGGGCTTCAGGAATATaGGGCTGTTGTACAGCTGCT +
Preference number: 4 (lower is better)
Translates to: SLCWKHSSSDTVFPRTEVWASGI*GCCTAA
Trigger: AGCAGCTGTACAACAGCCTCATATTCCTGAAGCCCA...AACTTCTGTCCTAGGGAAAACAGTGTCTGATGAGGAGTGTTTCCAACACAGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257575.9
ENST00000407967.7
CDS-3UTR TCA 90 bp CCAACAGATGGTATTTATTGGCTGAAGGGTACTTTGGGAGACATTAAAACACCATCTCGGAACTCGGCCTaGCAGATGGCGCAGATGTCA +
Preference number: 4 (lower is better)
Translates to: PTDGIYWLKGTLGDIKTPSRNSA*QMAQMS
Trigger: TGACATCTGCGCCATCTGTCAGGCCGAGTTCCGAGA...TGGTGTTTTAATGTCTCCCAAAGTACCCTTCAGCCAATAAATACCATCTGTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257575.9
ENST00000407967.7
CDS-3UTR TCA 90 bp TCCCAAAGTAATAAAGAGTTTGGAATCAGAATTCCAGGTCTGACTCCCAGCAGACTAGTCTTGAACTCTTaGCCTCAGGTGACCCGCCTG +
Preference number: 4 (lower is better)
Translates to: SQSNKEFGIRIPGLTPSRLVLNS*PQVTRL
Trigger: CAGGCGGGTCACCTGAGGTCAAGAGTTCAAGACTAG...TCTGCTGGGAGTCAGACCTGGAATTCTGATTCCAAACTCTTTATTACTTTGGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257575.9
CDS-3UTR TCA 90 bp GTAGCCTGTGTTGGAAACACTCCTCATCAGACACTGTTTTCCCTAGGACAGAAGCATCTGGGCCAAAGCTaGCCTTTCTTTCTTTCCTTC +
Preference number: 4 (lower is better)
Translates to: VACVGNTPHQTLFSLGQKHLGQS*PFFLSF
Trigger: GAAGGAAAGAAAGAAAGGTCAGCTTTGGCCCAGATG...CTTCTGTCCTAGGGAAAACAGTGTCTGATGAGGAGTGTTTCCAACACAGGCTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257575.9
CDS-3UTR TCA 90 bp CTGCACTTTCATCAATCTTCTCCAGCTCCAATTTCTTGTGCCCCTTCAACAGCACTTCCCCTTCCCACTTaGTTATTCAGGCAAGTGGGA +
Preference number: 4 (lower is better)
Translates to: LHFHQSSPAPISCAPSTALPLPT*LFRQVG
Trigger: TCCCACTTGCCTGAATAATCAAGTGGGAAGGGGAAG...TGCTGTTGAAGGGGCACAAGAAATTGGAGCTGGAGAAGATTGATGAAAGTGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257575.9
ENST00000392549.7
CDS-3UTR TCA 90 bp GAGCTTGAAAGATGCTACACTGCCCTGGAACAGACGTCTTGCTGGGTACCAGGACCTACTTACAACAAATaGGTTGCAGAACCAAGATAC +
Preference number: 4 (lower is better)
Translates to: ELERCYTALEQTSCWVPGPTYNK*VAEPRY
Trigger: GTATCTTGGTTCTGCAACTCATTTGTTGTAAGTAGG...TCCTGGTACCCAGCAAGACGTCTGTTCCAGGGCAGTGTAGCATCTTTCAAGCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257575.9
CDS-3UTR GCA 90 bp CCCTTCAACAGCATCTGCAGGCAGGATGATCTTTCCGATAAAAACCAGTTGCAGCAGAGACTCCAAACCTaGCCAGACAATTCAGCAATC +
Preference number: 4 (lower is better)
Translates to: PFNSICRQDDLSDKNQLQQRLQT*PDNSAI
Trigger: GATTGCTGAATTGTCTGGGCAGGTTTGGAGTCTCTG...CTGCAACTGGTTTTTATCGGAAAGATCATCCTGCCTGCAGATGCTGTTGAAGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257575.9
ENST00000392549.7
CDS-3UTR GCA 90 bp AGCATCTGCAGGCAGGATGATCTTTCCGATAAAAACCAGTTGCAGAAGTTCCTGTGTTATCCGTGTTGCTaGTGTGGCGTCTCTGCATCT +
Preference number: 4 (lower is better)
Translates to: SICRQDDLSDKNQLQKFLCYPCC*CGVSAS
Trigger: AGATGCAGAGACGCCACAGCAGCAACACGGATAACA...CAGGAACTTCTGCAACTGGTTTTTATCGGAAAGATCATCCTGCCTGCAGATGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257575.9
ENST00000392549.7
CDS-3UTR GCA 90 bp CATTCTTCTCTTCCGAAGCTGATGCACCTATCATATCTGTGTCCAAAGCTTGCCGAATGTTATCCGTGTTaGTGCTGTGGCGTCTCTGCA +
Preference number: 4 (lower is better)
Translates to: HSSLPKLMHLSYLCPKLAECYPC*CCGVSA
Trigger: TGCAGAGACGCCACAGCAGCAACACGGATAACATTC...GGCAAGCTTTGGACACAGATATGATAGGTGCATCAGCTTCGGAAGAGAAGAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257575.9
ENST00000407967.7
CDS-3UTR GCA 90 bp CATTCTTCTCTTCCGAAGCTGATGCACCTATCATATCTGTGTCCAAAGCTTGCCCGATGCACACAGCAATaGCGAGCTTATGCTGAAAGC +
Preference number: 4 (lower is better)
Translates to: HSSLPKLMHLSYLCPKLARCTQQ*RAYAES
Trigger: GCTTTCAGCATAAGCTCGGCATTGCTGTGTGCATCG...GGCAAGCTTTGGACACAGATATGATAGGTGCATCAGCTTCGGAAGAGAAGAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257575.9
ENST00000407967.7
CDS-3UTR GCA 90 bp CCAACAGATGGTATTTATTGGCTGAAGGGTACTTTGGGAGACATTAAAACACCATGGCATAGGCGAAGGTaGTGGCCATCCCGATGCACA +
Preference number: 4 (lower is better)
Translates to: PTDGIYWLKGTLGDIKTPWHRRR*WPSRCT
Trigger: TGTGCATCGGGATGGCCAGCACCTTCGCCTATGCCA...TGGTGTTTTAATGTCTCCCAAAGTACCCTTCAGCCAATAAATACCATCTGTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257575.9
ENST00000407967.7
CDS-3UTR GCA 90 bp ATCAATCTTCTCCAGCTCCAATTTCTTGTGCCCCTTCAACAGCATCTGCAGGCAAGATGTCGAAGGACTTaGAGAGGCTGTAGAGAACGA +
Preference number: 4 (lower is better)
Translates to: INLLQLQFLVPLQQHLQARCRRT*RGCRER
Trigger: TCGTTCTCTACAGCCTCTGCAAGTCCTTCGACATCT...TGCCTGCAGATGCTGTTGAAGGGGCACAAGAAATTGGAGCTGGAGAAGATTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257575.9
ENST00000392549.7
CDS-3UTR GCA 90 bp TGTGCCCCTTCAACAGCATCTGCAGGCAGGATGATCTTTCCGATAAAAACCAGTAGATGTCGAAGGACTTaGAGAGGCTGTAGAGAACGA +
Preference number: 4 (lower is better)
Translates to: CAPSTASAGRMIFPIKTSRCRRT*RGCRER
Trigger: TCGTTCTCTACAGCCTCTGCAAGTCCTTCGACATCT...ACTGGTTTTTATCGGAAAGATCATCCTGCCTGCAGATGCTGTTGAAGGGGCACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257575.9
ENST00000392549.7
CDS-3UTR GCA 90 bp TTACCTCTCTTTCTTCTAATCCCGAGTCTCAGCAGCCCGGATGTCTTCCTAACAAGATGTCGAAGGACTTaGAGAGGCTGTAGAGAACGA +
Preference number: 4 (lower is better)
Translates to: LPLFLLIPSLSSPDVFLTRCRRT*RGCRER
Trigger: TCGTTCTCTACAGCCTCTGCAAGTCCTTCGACATCT...TGTTAGGAAGACATCCGGGCTGCTGAGACTCGGGATTAGAAGAAAGAGAGGTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257575.9
ENST00000407967.7
CDS-3UTR GCA 90 bp CCAACAGATGGTATTTATTGGCTGAAGGGTACTTTGGGAGACATTAAAACACCACAGCACTCAGCACTTTaGGAGGCCAGGACAGGAGGA +
Preference number: 4 (lower is better)
Translates to: PTDGIYWLKGTLGDIKTPQHSAL*EARTGG
Trigger: TCCTCCTGTCCTGGCCTCGCAAAGTGCTGAGTGCTG...TGGTGTTTTAATGTCTCCCAAAGTACCCTTCAGCCAATAAATACCATCTGTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257575.9
CDS-3UTR GCA 90 bp AATCAGAATTCCAGGTCTGACTCCCAGCAGACTGTTCTATTTCCTTACACACCTACAGGGATTCTAATCTaGAGGCCTGGGCTATCTGGG +
Preference number: 4 (lower is better)
Translates to: NQNSRSDSQQTVLFPYTPTGILI*RPGLSG
Trigger: CCCAGATAGCCCAGGCCTGCAGATTAGAATCCCTGT...AGGTGTGTAAGGAAATAGAACAGTCTGCTGGGAGTCAGACCTGGAATTCTGATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257575.9
CDS-3UTR CCA 90 bp ATTAAAACACCAAAGGCAGCTGTTTGTCCTACAGCAGAAGTCCTAAAAGATTCCGGGGGATGTGACCAATaGATCCCAGAGAGGACAGGC +
Preference number: 4 (lower is better)
Translates to: IKTPKAAVCPTAEVLKDSGGCDQ*IPERTG
Trigger: GCCTGTCCTCTCTGGGATCCATTGGTCACATCCCCC...GGAATCTTTTAGGACTTCTGCTGTAGGACAAACAGCTGCCTTTGGTGTTTTAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000257575.9
ENST00000407967.7
CDS-3UTR CCA 90 bp ACTGTTCTATTTCCTTACACACCTGCACTTTCATCAATCTTCTCCAGCTCCAATTCGGAGCTGAGCGCCTaGCTGCGGTTTCTTTCAGGT +
Preference number: 4 (lower is better)
Translates to: TVLFPYTPALSSIFSSSNSELSA*LRFLSG
Trigger: ACCTGAAAGAAACCGCAGCCAGGCGCTCAGCTCCGA...ATTGGAGCTGGAGAAGATTGATGAAAGTGCAGGTGTGTAAGGAAATAGAACAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257575.9
ENST00000392549.7
CDS-3UTR CCA 90 bp CCAACAGATGGTATTTATTGGCTGAAGGGTACTTTGGGAGACATTAAAACACCAAGGGATCGGAACAGCTaGCTCAGCTCCTCGATGACC +
Preference number: 4 (lower is better)
Translates to: PTDGIYWLKGTLGDIKTPRDRNS*LSSSMT
Trigger: GGTCATCGAGGAGCTGAGCCAGCTGTTCCGATCCCT...TGGTGTTTTAATGTCTCCCAAAGTACCCTTCAGCCAATAAATACCATCTGTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257575.9
ENST00000407967.7
CDS-3UTR CCA 90 bp CATTCTTCTCTTCCGAAGCTGATGCACCTATCATATCTGTGTCCAAAGCTTGCCTATTTGTACCACAGCTaGATGGGGACAAGGGATCGG +
Preference number: 4 (lower is better)
Translates to: HSSLPKLMHLSYLCPKLAYLYHS*MGTRDR
Trigger: CCGATCCCTTGTCCCCATCCAGCTGTGGTACAAATA...GGCAAGCTTTGGACACAGATATGATAGGTGCATCAGCTTCGGAAGAGAAGAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257575.9
ENST00000407967.7
CDS-3UTR CCA 90 bp TGTTTTGGTGGCATGGGCATAATTGGAGAAACCATTGGGGTATTCACTAGTAACAGCCTCCCAAAATGCTaGCACTACAGGCATGGGCCA +
Preference number: 4 (lower is better)
Translates to: CFGGMGIIGETIGVFTSNSLPKC*HYRHGP
Trigger: TGGCCCATGCCTGTAGTGCCAGCATTTTGGGAGGCT...GTTACTAGTGAATACCCCAATGGTTTCTCCAATTATGCCCATGCCACCAAAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000257575.9
CDS-3UTR CCA 90 bp CTGCACTTTCATCAATCTTCTCCAGCTCCAATTTCTTGTGCCCCTTCAACAGCATCACAGAAGCACAGATaGTTACGGTGCTCCATGCCA +
Preference number: 4 (lower is better)
Translates to: LHFHQSSPAPISCAPSTASQKHR*LRCSMP
Trigger: TGGCATGGAGCACCGTAACCATCTGTGCTTCTGTGA...TGCTGTTGAAGGGGCACAAGAAATTGGAGCTGGAGAAGATTGATGAAAGTGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257575.9
CDS-3UTR CCA 90 bp TTCTCTTCCGAAGCTGATGCACCTATCATATCTGTGTCCAAAGCTTGCCTTTCTTGGCTGACAGCGAGGTaGCTACAAAGCTCCTCCATT +
Preference number: 4 (lower is better)
Translates to: FSSEADAPIISVSKACLSWLTAR*LQSSSI
Trigger: AATGGAGGAGCTTTGTAGCCACCTCGCTGTCAGCCA...AGAAAGGCAAGCTTTGGACACAGATATGATAGGTGCATCAGCTTCGGAAGAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257575.9
CDS-3UTR CCA 90 bp TTTGGAATCAGAATTCCAGGTCTGACTCCCAGCAGACTGTTCTATTTCCTTACAGATGCTACACTGCCCTaGAACAGACGTCTTGCTGGG +
Preference number: 4 (lower is better)
Translates to: FGIRIPGLTPSRLFYFLTDATLP*NRRLAG
Trigger: CCCAGCAAGACGTCTGTTCCAGGGCAGTGTAGCATC...TGTAAGGAAATAGAACAGTCTGCTGGGAGTCAGACCTGGAATTCTGATTCCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257575.9
ENST00000392549.7
CDS-3UTR CCA 90 bp GATTGTAACATCATGGCCATCGCCATAGTAACGGAGCTTGAAAGATGCTACACTCAGCAGGTAATACACTaGGTTCCGTCACCCTGGAGA +
Preference number: 4 (lower is better)
Translates to: DCNIMAIAIVTELERCYTQQVIH*VPSPWR
Trigger: TCTCCAGGGTGACGGAACCCAGTGTATTACCTGCTG...AGTGTAGCATCTTTCAAGCTCCGTTACTATGGCGATGGCCATGATGTTACAATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257575.9
ENST00000392549.7
CDS-3UTR CCA 90 bp ACTTTCATCAATCTTCTCCAGCTCCAATTTCTTGTGCCCCTTCAACAGCATCTGCAGCAGGTAATACACTaGGTTCCGTCACCCTGGAGA +
Preference number: 4 (lower is better)
Translates to: TFINLLQLQFLVPLQQHLQQVIH*VPSPWR
Trigger: TCTCCAGGGTGACGGAACCCAGTGTATTACCTGCTG...CAGATGCTGTTGAAGGGGCACAAGAAATTGGAGCTGGAGAAGATTGATGAAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257575.9
ENST00000392549.7
ENST00000547718.5
CDS-3UTR CCA 90 bp GAAAGATGCTACACTGCCCTGGAACAGACGTCTTGCTGGGTACCAGGAGAGAGCGTTTTATTGTTTTGGTaGCATGGGCATAATTGGAGA +
Preference number: 4 (lower is better)
Translates to: ERCYTALEQTSCWVPGESVLLFW*HGHNWR
Trigger: TCTCCAATTATGCCCATGCCACCAAAACAATAAAAC...GCTCTCTCCTGGTACCCAGCAAGACGTCTGTTCCAGGGCAGTGTAGCATCTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257575.9
ENST00000392549.7
CDS-3UTR CCA 90 bp GCAGACTGTTCTATTTCCTTACACACCTGCACTTTCATCAATCTTCTCCAGCTCGATCCCAAGGACCGCTaGCTCTGCAGTCTTCAAGTT +
Preference number: 4 (lower is better)
Translates to: ADCSISLHTCTFINLLQLDPKDR*LCSLQV
Trigger: AACTTGAAGACTGCAGAGCCAGCGGTCCTTGGGATC...GAGCTGGAGAAGATTGATGAAAGTGCAGGTGTGTAAGGAAATAGAACAGTCTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547718.5
CDS-3UTR TCA 90 bp TGTGTTGGAAACACTCCTCATCAGACACTGTTTTCCCTAGGACAGAAGTTAAATATCCTCAGGGGGATGTaGCCAATGGATCCCAGAGAG +
Preference number: 4 (lower is better)
Translates to: CVGNTPHQTLFSLGQKLNILRGM*PMDPRE
Trigger: CTCTCTGGGATCCATTGGTCACATCCCCCTGAGGAT...ATTTAACTTCTGTCCTAGGGAAAACAGTGTCTGATGAGGAGTGTTTCCAACACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257575.9
ENST00000407967.7
CDS-3UTR TCA 90 bp GATTGTAACATCATGGCCATCGCCATAGTAACGGAGCTTGAAAGATGCTACACTTGGGCTTCAGGAATATaGGGCTGTTGTACAGCTGCT +
Preference number: 4 (lower is better)
Translates to: DCNIMAIAIVTELERCYTWASGI*GCCTAA
Trigger: AGCAGCTGTACAACAGCCTCATATTCCTGAAGCCCA...AGTGTAGCATCTTTCAAGCTCCGTTACTATGGCGATGGCCATGATGTTACAATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257575.9
ENST00000392549.7
CDS-3UTR TCA 90 bp GACTGTTCTATTTCCTTACACACCTGCACTTTCATCAATCTTCTCCAGCTCCAAGGCTCAGCTCCTCGATaGCCAGATAGAACTTTCCCT +
Preference number: 4 (lower is better)
Translates to: DCSISLHTCTFINLLQLQGSAPR*PDRTFP
Trigger: AGGGAAAGTTCTATCTGGTCATCGAGGAGCTGAGCC...TTGGAGCTGGAGAAGATTGATGAAAGTGCAGGTGTGTAAGGAAATAGAACAGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257575.9
ENST00000392549.7
ENST00000547718.5
CDS-3UTR TCA 90 bp TGTTTTGGTGGCATGGGCATAATTGGAGAAACCATTGGGGTATTCACTAGTAACGGCTCAGCTCCTCGATaGCCAGATAGAACTTTCCCT +
Preference number: 4 (lower is better)
Translates to: CFGGMGIIGETIGVFTSNGSAPR*PDRTFP
Trigger: AGGGAAAGTTCTATCTGGTCATCGAGGAGCTGAGCC...GTTACTAGTGAATACCCCAATGGTTTCTCCAATTATGCCCATGCCACCAAAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257575.9
ENST00000392549.7
ENST00000407967.7
ENST00000547718.5
CDS-3UTR TCA 90 bp AGCCTGTGTTGGAAACACTCCTCATCAGACACTGTTTTCCCTAGGACAGAAGTTAGGAGTCGTCACCCATaGTGTATTTGTACCACAGCT +
Preference number: 4 (lower is better)
Translates to: SLCWKHSSSDTVFPRTEVRSRHP*CICTTA
Trigger: AGCTGTGGTACAAATACATCATGGGTGACGACTCCT...AACTTCTGTCCTAGGGAAAACAGTGTCTGATGAGGAGTGTTTCCAACACAGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257575.9
ENST00000407967.7
CDS-3UTR TCA 90 bp ACTTCCCAAAGTAATAAAGAGTTTGGAATCAGAATTCCAGGTCTGACTCCCAGCTTGTCCTGTTTGCTCTaGAGGCTACCAGAGGGGATG +
Preference number: 4 (lower is better)
Translates to: TSQSNKEFGIRIPGLTPSLSCLL*RLPEGM
Trigger: CATCCCCTCTGGTAGCCTTCAGAGCAAACAGGACAA...GCTGGGAGTCAGACCTGGAATTCTGATTCCAAACTCTTTATTACTTTGGGAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257575.9
CDS-3UTR TCA 90 bp GTAGCCTGTGTTGGAAACACTCCTCATCAGACACTGTTTTCCCTAGGACAGAAGTACAGGGAGGCTGAGTaGCTTCCCAAAGTAATAAAG +
Preference number: 4 (lower is better)
Translates to: VACVGNTPHQTLFSLGQKYREAE*LPKVIK
Trigger: CTTTATTACTTTGGGAAGTCACTCAGCCTCCCTGTA...CTTCTGTCCTAGGGAAAACAGTGTCTGATGAGGAGTGTTTCCAACACAGGCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257575.9
ENST00000407967.7
CDS-3UTR TCA 90 bp AATCAGAATTCCAGGTCTGACTCCCAGCAGACTGTTCTATTTCCTTACACACCTTGGCTACAGGGAGGCTaGGTGACTTCCCAAAGTAAT +
Preference number: 4 (lower is better)
Translates to: NQNSRSDSQQTVLFPYTPWLQGG*VTSQSN
Trigger: ATTACTTTGGGAAGTCACTCAGCCTCCCTGTAGCCA...AGGTGTGTAAGGAAATAGAACAGTCTGCTGGGAGTCAGACCTGGAATTCTGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257575.9
ENST00000392549.7
ENST00000547718.5
CDS-3UTR TCA 90 bp GCAGACTGTTCTATTTCCTTACACACCTGCACTTTCATCAATCTTCTCCAGCTCTGGCTACAGGGAGGCTaGGTGACTTCCCAAAGTAAT +
Preference number: 4 (lower is better)
Translates to: ADCSISLHTCTFINLLQLWLQGG*VTSQSN
Trigger: ATTACTTTGGGAAGTCACTCAGCCTCCCTGTAGCCA...GAGCTGGAGAAGATTGATGAAAGTGCAGGTGTGTAAGGAAATAGAACAGTCTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257575.9
ENST00000392549.7
ENST00000547718.5
CDS-3UTR TCA 90 bp CCGAGTCTCAGCAGCCCGGATGTCTTCCTAACACTCTGCACATCATTCTTCTCTCCTACTTACAACAAATaGGTTGCAGAACCAAGATAC +
Preference number: 4 (lower is better)
Translates to: PSLSSPDVFLTLCTSFFSPTYNK*VAEPRY
Trigger: GTATCTTGGTTCTGCAACTCATTTGTTGTAAGTAGG...AGAGAAGAATGATGTGCAGAGTGTTAGGAAGACATCCGGGCTGCTGAGACTCGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257575.9
ENST00000407967.7
CDS-3UTR GCA 90 bp ATAAGGGCAGGATACTGTGAACCTGATACTCGATTAACCCTACTTACAACAAATTCGTCTCCAGAGGGATaGACAGTCAGGGGAGCTTGC +
Preference number: 4 (lower is better)
Translates to: IRAGYCEPDTRLTLLTTNSSPEG*TVRGAC
Trigger: GCAAGCTCCCCTGACTGTGCATCCCTCTGGAGACGA...ATTTGTTGTAAGTAGGGTTAATCGAGTATCAGGTTCACAGTATCCTGCCCTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257575.9
ENST00000407967.7
CDS-3UTR GCA 90 bp ACTTTCATCAATCTTCTCCAGCTCCAATTTCTTGTGCCCCTTCAACAGCATCTGTGTTATCCGTGTTGCTaGTGTGGCGTCTCTGCATCT +
Preference number: 4 (lower is better)
Translates to: TFINLLQLQFLVPLQQHLCYPCC*CGVSAS
Trigger: AGATGCAGAGACGCCACAGCAGCAACACGGATAACA...CAGATGCTGTTGAAGGGGCACAAGAAATTGGAGCTGGAGAAGATTGATGAAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257575.9
ENST00000392549.7
ENST00000547718.5
CDS-3UTR GCA 90 bp CCAACAGATGGTATTTATTGGCTGAAGGGTACTTTGGGAGACATTAAAACACCATGGGGAGGCTGCCTCTaGCTTCAGACTCTCAAAGAC +
Preference number: 4 (lower is better)
Translates to: PTDGIYWLKGTLGDIKTPWGGCL*LQTLKD
Trigger: GTCTTTGAGAGTCTGAAGGCAGAGGCAGCCTCCCCA...TGGTGTTTTAATGTCTCCCAAAGTACCCTTCAGCCAATAAATACCATCTGTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257575.9
ENST00000407967.7
CDS-3UTR GCA 90 bp ATTAAAACACCAAAGGCAGCTGTTTGTCCTACAGCAGAAGTCCTAAAAGATTCCTGGGGAGGCTGCCTCTaGCTTCAGACTCTCAAAGAC +
Preference number: 4 (lower is better)
Translates to: IKTPKAAVCPTAEVLKDSWGGCL*LQTLKD
Trigger: GTCTTTGAGAGTCTGAAGGCAGAGGCAGCCTCCCCA...GGAATCTTTTAGGACTTCTGCTGTAGGACAAACAGCTGCCTTTGGTGTTTTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000257575.9
ENST00000407967.7
CDS-3UTR GCA 90 bp TTCTCTTCCGAAGCTGATGCACCTATCATATCTGTGTCCAAAGCTTGCCTTTCTGAGGCAGGATGTAAGTaGTTGAGGCCTGTTTCTCAG +
Preference number: 4 (lower is better)
Translates to: FSSEADAPIISVSKACLSEAGCK*LRPVSQ
Trigger: CTGAGAAACAGGCCTCAAGCACTTACATCCTGCCTC...AGAAAGGCAAGCTTTGGACACAGATATGATAGGTGCATCAGCTTCGGAAGAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257575.9
CDS-3UTR GCA 90 bp CTGCACTTTCATCAATCTTCTCCAGCTCCAATTTCTTGTGCCCCTTCAACAGCAATTTCTCCTGGGGCTTaGATGGTAATCTGCCCACTA +
Preference number: 4 (lower is better)
Translates to: LHFHQSSPAPISCAPSTAISPGA*MVICPL
Trigger: TAGTGGGCAGATTACCATGCAAGCCCCAGGAGAAAT...TGCTGTTGAAGGGGCACAAGAAATTGGAGCTGGAGAAGATTGATGAAAGTGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257575.9
CDS-3UTR GCA 90 bp GCAGACTGTTCTATTTCCTTACACACCTGCACTTTCATCAATCTTCTCCAGCTCCCCTTCAACAGCATCTaGAGGCAGGATGATCTTTCC +
Preference number: 4 (lower is better)
Translates to: ADCSISLHTCTFINLLQLPFNSI*RQDDLS
Trigger: GGAAAGATCATCCTGCCTGCAGATGCTGTTGAAGGG...GAGCTGGAGAAGATTGATGAAAGTGCAGGTGTGTAAGGAAATAGAACAGTCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257575.9
ENST00000392549.7
CDS-3UTR GCA 90 bp GATTGTAACATCATGGCCATCGCCATAGTAACGGAGCTTGAAAGATGCTACACTCCCTTCAACAGCATCTaGAGGCAGGATGATCTTTCC +
Preference number: 4 (lower is better)
Translates to: DCNIMAIAIVTELERCYTPFNSI*RQDDLS
Trigger: GGAAAGATCATCCTGCCTGCAGATGCTGTTGAAGGG...AGTGTAGCATCTTTCAAGCTCCGTTACTATGGCGATGGCCATGATGTTACAATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257575.9
ENST00000392549.7
CDS-3UTR GCA 90 bp CTTGAAAGATGCTACACTGCCCTGGAACAGACGTCTTGCTGGGTACCAGGAGAGATTTCCTTACACACCTaGACTTTCATCAATCTTCTC +
Preference number: 4 (lower is better)
Translates to: LERCYTALEQTSCWVPGEISLHT*TFINLL
Trigger: GAGAAGATTGATGAAAGTGCAGGTGTGTAAGGAAAT...CTCTCCTGGTACCCAGCAAGACGTCTGTTCCAGGGCAGTGTAGCATCTTTCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257575.9
ENST00000392549.7
CDS-3UTR CCA 90 bp TTTGGAATCAGAATTCCAGGTCTGACTCCCAGCAGACTGTTCTATTTCCTTACATGTACCACAGCTGGATaGGGACAAGGGATCGGAACA +
Preference number: 4 (lower is better)
Translates to: FGIRIPGLTPSRLFYFLTCTTAG*GQGIGT
Trigger: TGTTCCGATCCCTTGTCCCCATCCAGCTGTGGTACA...TGTAAGGAAATAGAACAGTCTGCTGGGAGTCAGACCTGGAATTCTGATTCCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257575.9
ENST00000392549.7
ENST00000547718.5
CDS-3UTR CCA 90 bp TCCCAAAGTAATAAAGAGTTTGGAATCAGAATTCCAGGTCTGACTCCCAGCAGATGTACCACAGCTGGATaGGGACAAGGGATCGGAACA +
Preference number: 4 (lower is better)
Translates to: SQSNKEFGIRIPGLTPSRCTTAG*GQGIGT
Trigger: TGTTCCGATCCCTTGTCCCCATCCAGCTGTGGTACA...TCTGCTGGGAGTCAGACCTGGAATTCTGATTCCAAACTCTTTATTACTTTGGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257575.9
ENST00000392549.7
ENST00000407967.7
ENST00000547718.5
CDS-3UTR CCA 90 bp ACTTCCCAAAGTAATAAAGAGTTTGGAATCAGAATTCCAGGTCTGACTCCCAGCTGTACCACAGCTGGATaGGGACAAGGGATCGGAACA +
Preference number: 4 (lower is better)
Translates to: TSQSNKEFGIRIPGLTPSCTTAG*GQGIGT
Trigger: TGTTCCGATCCCTTGTCCCCATCCAGCTGTGGTACA...GCTGGGAGTCAGACCTGGAATTCTGATTCCAAACTCTTTATTACTTTGGGAAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257575.9
ENST00000392549.7
ENST00000407967.7
ENST00000547718.5
CDS-3UTR CCA 90 bp TTTGGAATCAGAATTCCAGGTCTGACTCCCAGCAGACTGTTCTATTTCCTTACAATTAGCTGGGCATGGTaGCACGCATCTGTTGTCCCA +
Preference number: 4 (lower is better)
Translates to: FGIRIPGLTPSRLFYFLTISWAW*HASVVP
Trigger: TGGGACAACAGATGCGTGCCACCATGCCCAGCTAAT...TGTAAGGAAATAGAACAGTCTGCTGGGAGTCAGACCTGGAATTCTGATTCCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257575.9
CDS-3UTR CCA 90 bp TTACCTCTCTTTCTTCTAATCCCGAGTCTCAGCAGCCCGGATGTCTTCCTAACAGGAACATTTCAGAGGTaGAGAAGTGGCTCTGTCATA +
Preference number: 4 (lower is better)
Translates to: LPLFLLIPSLSSPDVFLTGTFQR*RSGSVI
Trigger: TATGACAGAGCCACTTCTCCACCTCTGAAATGTTCC...TGTTAGGAAGACATCCGGGCTGCTGAGACTCGGGATTAGAAGAAAGAGAGGTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257575.9
CDS-3UTR CCA 90 bp TTCTCTTCCGAAGCTGATGCACCTATCATATCTGTGTCCAAAGCTTGCCTTTCTAAAGTCCTGGTTTGGTaGCACACAGGGGCAAATGTC +
Preference number: 4 (lower is better)
Translates to: FSSEADAPIISVSKACLSKVLVW*HTGANV
Trigger: GACATTTGCCCCTGTGTGCCACCAAACCAGGACTTT...AGAAAGGCAAGCTTTGGACACAGATATGATAGGTGCATCAGCTTCGGAAGAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257575.9
CDS-3UTR CCA 90 bp TATTGTTTTGGTGGCATGGGCATAATTGGAGAAACCATTGGGGTATTCACTAGTGAACAGACGTCTTGCTaGGTACCAGGAGAGAGCCAG +
Preference number: 4 (lower is better)
Translates to: YCFGGMGIIGETIGVFTSEQTSC*VPGESQ
Trigger: CTGGCTCTCTCCTGGTACCCAGCAAGACGTCTGTTC...ACTAGTGAATACCCCAATGGTTTCTCCAATTATGCCCATGCCACCAAAACAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257575.9
ENST00000392549.7
CDS-3UTR CCA 90 bp TTGGTTCCAGCAGGTAATACACTGGGTTCCGTCACCCTGGAGATGGCTACAGGGTTTGTTTTATTGTTTTaGTGGCATGGGCATAATTGG +
Preference number: 4 (lower is better)
Translates to: LVPAGNTLGSVTLEMATGFVLLF*WHGHNW
Trigger: CCAATTATGCCCATGCCACCAAAACAATAAAACAAA...CCCTGTAGCCATCTCCAGGGTGACGGAACCCAGTGTATTACCTGCTGGAACCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257575.9
ENST00000392549.7
ENST00000407967.7
ENST00000547718.5
CDS-3UTR CCA 90 bp TTTGCAGGGGAAGGAGGCACGCACTATACCACAGAACGAGAGAGGAAGATGAAGACAGATGGTATTTATTaGCTGAAGGGTACTTTGGGA +
Preference number: 4 (lower is better)
Translates to: FAGEGGTHYTTERERKMKTDGIY*LKGTLG
Trigger: TCCCAAAGTACCCTTCAGCCAATAAATACCATCTGT...CTTCATCTTCCTCTCTCGTTCTGTGGTATAGTGCGTGCCTCCTTCCCCTGCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257575.9
CDS-3UTR CCA 90 bp GCAGACTGTTCTATTTCCTTACACACCTGCACTTTCATCAATCTTCTCCAGCTCAATGTCCTGAATCCTTaGCGTCCTTCTGGGTGTCCT +
Preference number: 4 (lower is better)
Translates to: ADCSISLHTCTFINLLQLNVLNP*RPSGCP
Trigger: AGGACACCCAGAAGGACGCCAAGGATTCAGGACATT...GAGCTGGAGAAGATTGATGAAAGTGCAGGTGTGTAAGGAAATAGAACAGTCTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392549.7
CDS-3UTR CCA 90 bp TTTGAGAGTCACTCACTCACCTACCCTGAGCCACTGGGCAGATTCTTATTCTGCACAACACCAGTGACCTaGGAATGTCATCTACTTAAC +
Preference number: 4 (lower is better)
Translates to: FESHSLTYPEPLGRFLFCTTPVT*ECHLLN
Trigger: GTTAAGTAGATGACATTCCCAGGTCACTGGTGTTGT...GCAGAATAAGAATCTGCCCAGTGGCTCAGGGTAGGTGAGTGAGTGACTCTCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677328.1
CDS-3UTR TCA 90 bp AGCCTGTGTTGGAAACACTCCTCATCAGACACTGTTTTCCCTAGGACAGAAGTTATCTTCCTTAACACCTaGTTCACTGTGAAGAGCCAC +
Preference number: 4 (lower is better)
Translates to: SLCWKHSSSDTVFPRTEVIFLNT*FTVKSH
Trigger: GTGGCTCTTCACAGTGAATCAGGTGTTAAGGAAGAT...AACTTCTGTCCTAGGGAAAACAGTGTCTGATGAGGAGTGTTTCCAACACAGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257575.9
ENST00000407967.7
CDS-3UTR TCA 90 bp GACATTAAAACACCAAAGGCAGCTGTTTGTCCTACAGCAGAAGTCCTAAAAGATCCAGGATCCACAAGATaGCCAGCACTGACCTCTTCT +
Preference number: 4 (lower is better)
Translates to: DIKTPKAAVCPTAEVLKDPGSTR*PALTSS
Trigger: AGAAGAGGTCAGTGCTGGTCATCTTGTGGATCCTGG...ATCTTTTAGGACTTCTGCTGTAGGACAAACAGCTGCCTTTGGTGTTTTAATGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257575.9
ENST00000407967.7
CDS-3UTR TCA 90 bp AGCATCTGCAGGCAGGATGATCTTTCCGATAAAAACCAGTTGCAGAAGTTCCTGACAGCTGCTGGGAGCTaGATGTATAAAGCACATAGA +
Preference number: 4 (lower is better)
Translates to: SICRQDDLSDKNQLQKFLTAAGS*MYKAHR
Trigger: TCTATGTGCTTTATACATTCAGCTCCCAGCAGCTGT...CAGGAACTTCTGCAACTGGTTTTTATCGGAAAGATCATCCTGCCTGCAGATGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257575.9
ENST00000392549.7
CDS-3UTR TCA 90 bp GACATTAAAACACCAAAGGCAGCTGTTTGTCCTACAGCAGAAGTCCTAAAAGATGGCTCAGCTCCTCGATaGCCAGATAGAACTTTCCCT +
Preference number: 4 (lower is better)
Translates to: DIKTPKAAVCPTAEVLKDGSAPR*PDRTFP
Trigger: AGGGAAAGTTCTATCTGGTCATCGAGGAGCTGAGCC...ATCTTTTAGGACTTCTGCTGTAGGACAAACAGCTGCCTTTGGTGTTTTAATGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257575.9
ENST00000407967.7
CDS-3UTR TCA 90 bp TGTGTTGGAAACACTCCTCATCAGACACTGTTTTCCCTAGGACAGAAGTTAAATGGAGGGAGGATCACTTaGGCCCAGGAGTTTGAATCT +
Preference number: 4 (lower is better)
Translates to: CVGNTPHQTLFSLGQKLNGGRIT*AQEFES
Trigger: AGATTCAAACTCCTGGGCTCAAGTGATCCTCCCTCC...ATTTAACTTCTGTCCTAGGGAAAACAGTGTCTGATGAGGAGTGTTTCCAACACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257575.9
CDS-3UTR TCA 90 bp TTTGGAATCAGAATTCCAGGTCTGACTCCCAGCAGACTGTTCTATTTCCTTACACTTCCCCTTCCCACTTaGTTATTCAGGCAAGTGGGA +
Preference number: 4 (lower is better)
Translates to: FGIRIPGLTPSRLFYFLTLPLPT*LFRQVG
Trigger: TCCCACTTGCCTGAATAATCAAGTGGGAAGGGGAAG...TGTAAGGAAATAGAACAGTCTGCTGGGAGTCAGACCTGGAATTCTGATTCCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257575.9
ENST00000392549.7
CDS-3UTR TCA 90 bp TTTGAGAGTCACTCACTCACCTACCCTGAGCCACTGGGCAGATTCTTATTCTGCTTTAAAACTCAGCTCTaGTGTCACCTTCTTCAGGAA +
Preference number: 4 (lower is better)
Translates to: FESHSLTYPEPLGRFLFCFKTQL*CHLLQE
Trigger: TTCCTGAAGAAGGTGACATCAGAGCTGAGTTTTAAA...GCAGAATAAGAATCTGCCCAGTGGCTCAGGGTAGGTGAGTGAGTGACTCTCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677328.1
CDS-3UTR GCA 90 bp GACTGTTCTATTTCCTTACACACCTGCACTTTCATCAATCTTCTCCAGCTCCAAGGATGCTGCATGCTTTaGCTGCTGCGCATGAAGTAT +
Preference number: 4 (lower is better)
Translates to: DCSISLHTCTFINLLQLQGCCML*LLRMKY
Trigger: ATACTTCATGCGCAGCAGGCAAAGCATGCAGCATCC...TTGGAGCTGGAGAAGATTGATGAAAGTGCAGGTGTGTAAGGAAATAGAACAGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257575.9
CDS-3UTR GCA 90 bp TTTGGAATCAGAATTCCAGGTCTGACTCCCAGCAGACTGTTCTATTTCCTTACAGGAGAACAGAGCAGCTaGATTCACATGGCCCCATTT +
Preference number: 4 (lower is better)
Translates to: FGIRIPGLTPSRLFYFLTGEQSS*IHMAPF
Trigger: AAATGGGGCCATGTGAATGCAGCTGCTCTGTTCTCC...TGTAAGGAAATAGAACAGTCTGCTGGGAGTCAGACCTGGAATTCTGATTCCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257575.9
ENST00000392549.7
CDS-3UTR GCA 90 bp AATCAGAATTCCAGGTCTGACTCCCAGCAGACTGTTCTATTTCCTTACACACCTAGCTCCAATTTCTTGTaGCCCTTCAACAGCATCTGC +
Preference number: 4 (lower is better)
Translates to: NQNSRSDSQQTVLFPYTPSSNFL*PFNSIC
Trigger: GCAGATGCTGTTGAAGGGGCACAAGAAATTGGAGCT...AGGTGTGTAAGGAAATAGAACAGTCTGCTGGGAGTCAGACCTGGAATTCTGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257575.9
ENST00000392549.7
CDS-3UTR GCA 90 bp TCTGCCCCTGTGTGTCCCCCACATGTTACATTCTTTACAGTGTTAACAGGCATGCCAGAGGGTAGGGCATaGACTAATAAAATCCTAAAC +
Preference number: 4 (lower is better)
Translates to: SAPVCPPHVTFFTVLTGMPEGRA*TNKILN
Trigger: GTTTAGGATTTTATTAGTGCATGCCCTACCCTCTGG...CATGCCTGTTAACACTGTAAAGAATGTAACATGTGGGGGACACACAGGGGCAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000257575.9
ENST00000407967.7
CDS-3UTR CCA 90 bp CTTGAAAGATGCTACACTGCCCTGGAACAGACGTCTTGCTGGGTACCAGGAGAGAAAATAACCAACAAGTaGGAACTTCATGTATTGCCA +
Preference number: 4 (lower is better)
Translates to: LERCYTALEQTSCWVPGEKITNK*ELHVLP
Trigger: TGGCAATACATGAAGTTCCCACTTGTTGGTTATTTT...CTCTCCTGGTACCCAGCAAGACGTCTGTTCCAGGGCAGTGTAGCATCTTTCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257575.9
CDS-3UTR CCA 90 bp AATCAGAATTCCAGGTCTGACTCCCAGCAGACTGTTCTATTTCCTTACACACCTTCCATGCCACTACCCTaGTTGGTGGAAACATCCATA +
Preference number: 4 (lower is better)
Translates to: NQNSRSDSQQTVLFPYTPSMPLP*LVETSI
Trigger: TATGGATGTTTCCACCAACCAGGGTAGTGGCATGGA...AGGTGTGTAAGGAAATAGAACAGTCTGCTGGGAGTCAGACCTGGAATTCTGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257575.9
CDS-3UTR TCA 90 bp ATAAGGGCAGGATACTGTGAACCTGATACTCGATTAACCCTACTTACAACAAATATGCCGAGCTTATGCTaGAAGCACAGTTTGGCCAGG +
Preference number: 4 (lower is better)
Translates to: IRAGYCEPDTRLTLLTTNMPSLC*KHSLAR
Trigger: CCTGGCCAAACTGTGCTTTCAGCATAAGCTCGGCAT...ATTTGTTGTAAGTAGGGTTAATCGAGTATCAGGTTCACAGTATCCTGCCCTTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257575.9
ENST00000407967.7
CDS-3UTR TCA 90 bp ACTTCCCAAAGTAATAAAGAGTTTGGAATCAGAATTCCAGGTCTGACTCCCAGCAGGAGTCGTCACCCATaGTGTATTTGTACCACAGCT +
Preference number: 4 (lower is better)
Translates to: TSQSNKEFGIRIPGLTPSRSRHP*CICTTA
Trigger: AGCTGTGGTACAAATACATCATGGGTGACGACTCCT...GCTGGGAGTCAGACCTGGAATTCTGATTCCAAACTCTTTATTACTTTGGGAAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257575.9
ENST00000392549.7
ENST00000407967.7
ENST00000547718.5
CDS-3UTR TCA 90 bp TGTGTTGGAAACACTCCTCATCAGACACTGTTTTCCCTAGGACAGAAGTTAAATCAGGATGTAAGTGCTTaGGGCCTGTTTCTCAGGAAG +
Preference number: 4 (lower is better)
Translates to: CVGNTPHQTLFSLGQKLNQDVSA*GLFLRK
Trigger: CTTCCTGAGAAACAGGCCTCAAGCACTTACATCCTG...ATTTAACTTCTGTCCTAGGGAAAACAGTGTCTGATGAGGAGTGTTTCCAACACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257575.9
CDS-3UTR TCA 90 bp TCTATTTCCTTACACACCTGCACTTTCATCAATCTTCTCCAGCTCCAATTTCTTGAAGGGCATCAAGTCTaGGTTAGGAAGACGTCCCCT +
Preference number: 4 (lower is better)
Translates to: SISLHTCTFINLLQLQFLEGHQV*VRKTSP
Trigger: AGGGGACGTCTTCCTAACTCAGACTTGATGCCCTTC...AAGAAATTGGAGCTGGAGAAGATTGATGAAAGTGCAGGTGTGTAAGGAAATAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257575.9
CDS-3UTR TCA 90 bp TTTGGAATCAGAATTCCAGGTCTGACTCCCAGCAGACTGTTCTATTTCCTTACACATAGTAACGGAGCTTaGAAGATGCTACACTGCCCT +
Preference number: 4 (lower is better)
Translates to: FGIRIPGLTPSRLFYFLTHSNGA*KMLHCP
Trigger: AGGGCAGTGTAGCATCTTTCAAGCTCCGTTACTATG...TGTAAGGAAATAGAACAGTCTGCTGGGAGTCAGACCTGGAATTCTGATTCCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257575.9
ENST00000392549.7
CDS-3UTR TCA 90 bp ACTTTCATCAATCTTCTCCAGCTCCAATTTCTTGTGCCCCTTCAACAGCATCTGTACAGGGAGGCTGAGTaGCTTCCCAAAGTAATAAAG +
Preference number: 4 (lower is better)
Translates to: TFINLLQLQFLVPLQQHLYREAE*LPKVIK
Trigger: CTTTATTACTTTGGGAAGTCACTCAGCCTCCCTGTA...CAGATGCTGTTGAAGGGGCACAAGAAATTGGAGCTGGAGAAGATTGATGAAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257575.9
ENST00000392549.7
ENST00000547718.5
CDS-3UTR GCA 90 bp ATTAAAACACCAAAGGCAGCTGTTTGTCCTACAGCAGAAGTCCTAAAAGATTCCCGATGCACACAGCAATaGCGAGCTTATGCTGAAAGC +
Preference number: 4 (lower is better)
Translates to: IKTPKAAVCPTAEVLKDSRCTQQ*RAYAES
Trigger: GCTTTCAGCATAAGCTCGGCATTGCTGTGTGCATCG...GGAATCTTTTAGGACTTCTGCTGTAGGACAAACAGCTGCCTTTGGTGTTTTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257575.9
ENST00000407967.7
CDS-3UTR GCA 90 bp CCAACAGATGGTATTTATTGGCTGAAGGGTACTTTGGGAGACATTAAAACACCATCCTCACAGAACACGTaGTGGCACAGGAGAATCAGA +
Preference number: 4 (lower is better)
Translates to: PTDGIYWLKGTLGDIKTPSSQNT*WHRRIR
Trigger: TCTGATTCTCCTGTGCCAGCACGTGTTCTGTGAGGA...TGGTGTTTTAATGTCTCCCAAAGTACCCTTCAGCCAATAAATACCATCTGTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257575.9
CDS-3UTR GCA 90 bp TCCCAAAGTAATAAAGAGTTTGGAATCAGAATTCCAGGTCTGACTCCCAGCAGAGGGAACTTCATGTATTaGCAGGTCCTTGACTTGGAG +
Preference number: 4 (lower is better)
Translates to: SQSNKEFGIRIPGLTPSRGNFMY*QVLDLE
Trigger: CTCCAAGTCAAGGACCTGGCAATACATGAAGTTCCC...TCTGCTGGGAGTCAGACCTGGAATTCTGATTCCAAACTCTTTATTACTTTGGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257575.9
CDS-3UTR GCA 90 bp AAGAAAACCTCAGATGGGACGTTCCCCCAGAGGGTAGGGCATGCACTAATAAAAGCATGGCTCACTCTTTaGAGTGTTAGAGAATTTTGT +
Preference number: 4 (lower is better)
Translates to: KKTSDGTFPQRVGHALIKAWLTL*SVREFC
Trigger: ACAAAATTCTCTAACACTGCAAAGAGTGAGCCATGC...TTTTATTAGTGCATGCCCTACCCTCTGGGGGAACGTCCCATCTGAGGTTTTCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000257575.9
ENST00000407967.7
CDS-3UTR CCA 90 bp ATATTTTACATGAAGAGGTCCATTTCTAAGGACTTCGTGGAACTTGAGTCAGTGTCACAGAACACGTGCTaGCACAGGAGAATCAGAGGC +
Preference number: 4 (lower is better)
Translates to: IFYMKRSISKDFVELESVSQNTC*HRRIRG
Trigger: GCCTCTGATTCTCCTGTGCCAGCACGTGTTCTGTGA...CACTGACTCAAGTTCCACGAAGTCCTTAGAAATGGACCTCTTCATGTAAAATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257575.9
CDS-3UTR CCA 90 bp TCTATTTCCTTACACACCTGCACTTTCATCAATCTTCTCCAGCTCCAATTTCTTCAGCAGGTAATACACTaGGTTCCGTCACCCTGGAGA +
Preference number: 4 (lower is better)
Translates to: SISLHTCTFINLLQLQFLQQVIH*VPSPWR
Trigger: TCTCCAGGGTGACGGAACCCAGTGTATTACCTGCTG...AAGAAATTGGAGCTGGAGAAGATTGATGAAAGTGCAGGTGTGTAAGGAAATAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257575.9
ENST00000392549.7
ENST00000547718.5
CDS-3UTR CCA 90 bp CCTCTCTTTCTTCTAATCCCGAGTCTCAGCAGCCCGGATGTCTTCCTAACACTCTTTGTTTTATTGTTTTaGTGGCATGGGCATAATTGG +
Preference number: 4 (lower is better)
Translates to: PLFLLIPSLSSPDVFLTLFVLLF*WHGHNW
Trigger: CCAATTATGCCCATGCCACCAAAACAATAAAACAAA...GAGTGTTAGGAAGACATCCGGGCTGCTGAGACTCGGGATTAGAAGAAAGAGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257575.9
ENST00000407967.7
CDS-3UTR CCA 90 bp TCTATTTCCTTACACACCTGCACTTTCATCAATCTTCTCCAGCTCCAATTTCTTCCCTTCAACAGCATCTaGCACAGGAGAATCAGAGGC +
Preference number: 4 (lower is better)
Translates to: SISLHTCTFINLLQLQFLPFNSI*HRRIRG
Trigger: GCCTCTGATTCTCCTGTGCCAGATGCTGTTGAAGGG...AAGAAATTGGAGCTGGAGAAGATTGATGAAAGTGCAGGTGTGTAAGGAAATAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547718.5
CDS-3UTR TCA 90 bp ACTTCCCAAAGTAATAAAGAGTTTGGAATCAGAATTCCAGGTCTGACTCCCAGCATCTTCCTTAACACCTaGTTCACTGTGAAGAGCCAC +
Preference number: 4 (lower is better)
Translates to: TSQSNKEFGIRIPGLTPSIFLNT*FTVKSH
Trigger: GTGGCTCTTCACAGTGAATCAGGTGTTAAGGAAGAT...GCTGGGAGTCAGACCTGGAATTCTGATTCCAAACTCTTTATTACTTTGGGAAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257575.9
ENST00000392549.7
ENST00000407967.7
ENST00000547718.5
CDS-3UTR TCA 90 bp ACTTCCCAAAGTAATAAAGAGTTTGGAATCAGAATTCCAGGTCTGACTCCCAGCACAGCTGCTGGGAGCTaGATGTATAAAGCACATAGA +
Preference number: 4 (lower is better)
Translates to: TSQSNKEFGIRIPGLTPSTAAGS*MYKAHR
Trigger: TCTATGTGCTTTATACATTCAGCTCCCAGCAGCTGT...GCTGGGAGTCAGACCTGGAATTCTGATTCCAAACTCTTTATTACTTTGGGAAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257575.9
ENST00000392549.7
ENST00000407967.7
ENST00000547718.5
CDS-3UTR TCA 90 bp GACATTAAAACACCAAAGGCAGCTGTTTGTCCTACAGCAGAAGTCCTAAAAGATAACGAGAGAGGAAGATaGAGGTCAGAAGGACAAGAC +
Preference number: 4 (lower is better)
Translates to: DIKTPKAAVCPTAEVLKDNERGR*RSEGQD
Trigger: GTCTTGTCCTTCTGACCTTCATCTTCCTCTCTCGTT...ATCTTTTAGGACTTCTGCTGTAGGACAAACAGCTGCCTTTGGTGTTTTAATGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257575.9
CDS-3UTR TCA 90 bp TGTTTTGGTGGCATGGGCATAATTGGAGAAACCATTGGGGTATTCACTAGTAACTACAGGGAGGCTGAGTaGCTTCCCAAAGTAATAAAG +
Preference number: 4 (lower is better)
Translates to: CFGGMGIIGETIGVFTSNYREAE*LPKVIK
Trigger: CTTTATTACTTTGGGAAGTCACTCAGCCTCCCTGTA...GTTACTAGTGAATACCCCAATGGTTTCTCCAATTATGCCCATGCCACCAAAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257575.9
ENST00000392549.7
ENST00000407967.7
ENST00000547718.5
CDS-3UTR TCA 90 bp ATATTTTACATGAAGAGGTCCATTTCTAAGGACTTCGTGGAACTTGAGTCAGTGTGGCTACAGGGAGGCTaGGTGACTTCCCAAAGTAAT +
Preference number: 4 (lower is better)
Translates to: IFYMKRSISKDFVELESVWLQGG*VTSQSN
Trigger: ATTACTTTGGGAAGTCACTCAGCCTCCCTGTAGCCA...CACTGACTCAAGTTCCACGAAGTCCTTAGAAATGGACCTCTTCATGTAAAATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257575.9
ENST00000407967.7
CDS-3UTR TCA 90 bp TTTGGGACCTTAAGTCATTACAGGTATATGGTGGGGCCCAACAACTGTATTTTGCTTCTCTTCCGAAGCTaGTGCACCTATCATATCTGT +
Preference number: 4 (lower is better)
Translates to: FGTLSHYRYMVGPNNCILLLFRS*CTYHIC
Trigger: ACAGATATGATAGGTGCATCAGCTTCGGAAGAGAAG...CAAAATACAGTTGTTGGGCCCCACCATATACCTGTAATGACTTAAGGTCCCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257575.9
CDS-3UTR TCA 90 bp ACTTCCCAAAGTAATAAAGAGTTTGGAATCAGAATTCCAGGTCTGACTCCCAGCCTTCTCTTCCGAAGCTaGTGCACCTATCATATCTGT +
Preference number: 4 (lower is better)
Translates to: TSQSNKEFGIRIPGLTPSLLFRS*CTYHIC
Trigger: ACAGATATGATAGGTGCATCAGCTTCGGAAGAGAAG...GCTGGGAGTCAGACCTGGAATTCTGATTCCAAACTCTTTATTACTTTGGGAAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257575.9
ENST00000407967.7
CDS-3UTR TCA 90 bp AAAACACCAAAGGCAGCTGTTTGTCCTACAGCAGAAGTCCTAAAAGATTCCAGGATGGTATTTATTGGCTaGAGGGTACTTTGGGAGACA +
Preference number: 4 (lower is better)
Translates to: KTPKAAVCPTAEVLKDSRMVFIG*RVLWET
Trigger: TGTCTCCCAAAGTACCCTTCAGCCAATAAATACCAT...CCTGGAATCTTTTAGGACTTCTGCTGTAGGACAAACAGCTGCCTTTGGTGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257575.9
ENST00000407967.7
CDS-3UTR GCA 90 bp GACATTAAAACACCAAAGGCAGCTGTTTGTCCTACAGCAGAAGTCCTAAAAGATCAGAGACTCCAAACCTaGCCAGACAATTCAGCAATC +
Preference number: 4 (lower is better)
Translates to: DIKTPKAAVCPTAEVLKDQRLQT*PDNSAI
Trigger: GATTGCTGAATTGTCTGGGCAGGTTTGGAGTCTCTG...ATCTTTTAGGACTTCTGCTGTAGGACAAACAGCTGCCTTTGGTGTTTTAATGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257575.9
ENST00000407967.7
CDS-3UTR GCA 90 bp TGTGTTGGAAACACTCCTCATCAGACACTGTTTTCCCTAGGACAGAAGTTAAATCAGAGACTCCAAACCTaGCCAGACAATTCAGCAATC +
Preference number: 4 (lower is better)
Translates to: CVGNTPHQTLFSLGQKLNQRLQT*PDNSAI
Trigger: GATTGCTGAATTGTCTGGGCAGGTTTGGAGTCTCTG...ATTTAACTTCTGTCCTAGGGAAAACAGTGTCTGATGAGGAGTGTTTCCAACACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257575.9
ENST00000407967.7
CDS-3UTR GCA 90 bp ATAAGGGCAGGATACTGTGAACCTGATACTCGATTAACCCTACTTACAACAAATTGTTATCCGTGTTGCTaGTGTGGCGTCTCTGCATCT +
Preference number: 4 (lower is better)
Translates to: IRAGYCEPDTRLTLLTTNCYPCC*CGVSAS
Trigger: AGATGCAGAGACGCCACAGCAGCAACACGGATAACA...ATTTGTTGTAAGTAGGGTTAATCGAGTATCAGGTTCACAGTATCCTGCCCTTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257575.9
ENST00000407967.7
CDS-3UTR GCA 90 bp ATAAGGGCAGGATACTGTGAACCTGATACTCGATTAACCCTACTTACAACAAATGAATGTTATCCGTGTTaGTGCTGTGGCGTCTCTGCA +
Preference number: 4 (lower is better)
Translates to: IRAGYCEPDTRLTLLTTNECYPC*CCGVSA
Trigger: TGCAGAGACGCCACAGCAGCAACACGGATAACATTC...ATTTGTTGTAAGTAGGGTTAATCGAGTATCAGGTTCACAGTATCCTGCCCTTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257575.9
ENST00000407967.7
CDS-3UTR GCA 90 bp TCTATTTCCTTACACACCTGCACTTTCATCAATCTTCTCCAGCTCCAATTTCTTTCCTCACAGAACACGTaGTGGCACAGGAGAATCAGA +
Preference number: 4 (lower is better)
Translates to: SISLHTCTFINLLQLQFLSSQNT*WHRRIR
Trigger: TCTGATTCTCCTGTGCCAGCACGTGTTCTGTGAGGA...AAGAAATTGGAGCTGGAGAAGATTGATGAAAGTGCAGGTGTGTAAGGAAATAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257575.9
ENST00000392549.7
CDS-3UTR GCA 90 bp TCTGCCCCTGTGTGTCCCCCACATGTTACATTCTTTACAGTGTTAACAGGCATGATTTCCTTACACACCTaGACTTTCATCAATCTTCTC +
Preference number: 4 (lower is better)
Translates to: SAPVCPPHVTFFTVLTGMISLHT*TFINLL
Trigger: GAGAAGATTGATGAAAGTGCAGGTGTGTAAGGAAAT...CATGCCTGTTAACACTGTAAAGAATGTAACATGTGGGGGACACACAGGGGCAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257575.9
ENST00000407967.7
CDS-3UTR GCA 90 bp GTAGCCTGTGTTGGAAACACTCCTCATCAGACACTGTTTTCCCTAGGACAGAAGATTTCCTTACACACCTaGACTTTCATCAATCTTCTC +
Preference number: 4 (lower is better)
Translates to: VACVGNTPHQTLFSLGQKISLHT*TFINLL
Trigger: GAGAAGATTGATGAAAGTGCAGGTGTGTAAGGAAAT...CTTCTGTCCTAGGGAAAACAGTGTCTGATGAGGAGTGTTTCCAACACAGGCTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257575.9
ENST00000407967.7
CDS-3UTR GCA 90 bp TTCTCTTCCGAAGCTGATGCACCTATCATATCTGTGTCCAAAGCTTGCCTTTCTGTCTTCCTAACACTCTaGACATCATTCTTCTCTTCC +
Preference number: 4 (lower is better)
Translates to: FSSEADAPIISVSKACLSVFLTL*TSFFSS
Trigger: GGAAGAGAAGAATGATGTGCAGAGTGTTAGGAAGAC...AGAAAGGCAAGCTTTGGACACAGATATGATAGGTGCATCAGCTTCGGAAGAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257575.9
ENST00000407967.7
CDS-3UTR GCA 90 bp CCAACAGATGGTATTTATTGGCTGAAGGGTACTTTGGGAGACATTAAAACACCAAGCTCCAATTTCTTGTaGCCCTTCAACAGCATCTGG +
Preference number: 4 (lower is better)
Translates to: PTDGIYWLKGTLGDIKTPSSNFL*PFNSIW
Trigger: CCAGATGCTGTTGAAGGGGCACAAGAAATTGGAGCT...TGGTGTTTTAATGTCTCCCAAAGTACCCTTCAGCCAATAAATACCATCTGTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407967.7
CDS-3UTR CCA 90 bp ACTTCCCAAAGTAATAAAGAGTTTGGAATCAGAATTCCAGGTCTGACTCCCAGCGCGGTTTCTTTCAGGTaGAATGTTATCCGTGTTGCT +
Preference number: 4 (lower is better)
Translates to: TSQSNKEFGIRIPGLTPSAVSFR*NVIRVA
Trigger: AGCAACACGGATAACATTCCACCTGAAAGAAACCGC...GCTGGGAGTCAGACCTGGAATTCTGATTCCAAACTCTTTATTACTTTGGGAAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257575.9
ENST00000392549.7
ENST00000407967.7
CDS-3UTR CCA 90 bp CATTCTTCTCTTCCGAAGCTGATGCACCTATCATATCTGTGTCCAAAGCTTGCCATTACAGGTATATGGTaGGGCCCAACAACTGTATTT +
Preference number: 4 (lower is better)
Translates to: HSSLPKLMHLSYLCPKLAITGIW*GPTTVF
Trigger: AAATACAGTTGTTGGGCCCCACCATATACCTGTAAT...GGCAAGCTTTGGACACAGATATGATAGGTGCATCAGCTTCGGAAGAGAAGAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257575.9
CDS-3UTR CCA 90 bp TCTATTTCCTTACACACCTGCACTTTCATCAATCTTCTCCAGCTCCAATTTCTTAAAGTCCTGGTTTGGTaGCACACAGGGGCAAATGTC +
Preference number: 4 (lower is better)
Translates to: SISLHTCTFINLLQLQFLKVLVW*HTGANV
Trigger: GACATTTGCCCCTGTGTGCCACCAAACCAGGACTTT...AAGAAATTGGAGCTGGAGAAGATTGATGAAAGTGCAGGTGTGTAAGGAAATAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257575.9
ENST00000392549.7
CDS-3UTR CCA 90 bp GATTGTAACATCATGGCCATCGCCATAGTAACGGAGCTTGAAAGATGCTACACTTGGCATGGGCATAATTaGAGAAACCATTGGGGTATT +
Preference number: 4 (lower is better)
Translates to: DCNIMAIAIVTELERCYTWHGHN*RNHWGI
Trigger: AATACCCCAATGGTTTCTCCAATTATGCCCATGCCA...AGTGTAGCATCTTTCAAGCTCCGTTACTATGGCGATGGCCATGATGTTACAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257575.9
ENST00000392549.7
CDS-3UTR CCA 90 bp TTCTCTTCCGAAGCTGATGCACCTATCATATCTGTGTCCAAAGCTTGCCTTTCTTGGCATGGGCATAATTaGAGAAACCATTGGGGTATT +
Preference number: 4 (lower is better)
Translates to: FSSEADAPIISVSKACLSWHGHN*RNHWGI
Trigger: AATACCCCAATGGTTTCTCCAATTATGCCCATGCCA...AGAAAGGCAAGCTTTGGACACAGATATGATAGGTGCATCAGCTTCGGAAGAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257575.9
ENST00000407967.7
3UTR CAA 72 bp GCACCAACAGATGGTATTTATTGGCTGAAGGGTACTTaGGGAGACATTAAAACACCAAAGGCAGCTGTTTGT +
Preference number: 4 (lower is better)
Translates to: APTDGIYWLKGT*GDIKTPKAAVC
Trigger: ACAAACAGCTGCCTTTGGTGTTTTAATGTCTCCCAAAGTACCCTTCAGCCAATAAATACCATCTGTTGGTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257575.9
ENST00000407967.7
CDS-3UTR TCA 90 bp ATATTTTACATGAAGAGGTCCATTTCTAAGGACTTCGTGGAACTTGAGTCAGTGCATAGTAACGGAGCTTaGAAGATGCTACACTGCCCT +
Preference number: 4 (lower is better)
Translates to: IFYMKRSISKDFVELESVHSNGA*KMLHCP
Trigger: AGGGCAGTGTAGCATCTTTCAAGCTCCGTTACTATG...CACTGACTCAAGTTCCACGAAGTCCTTAGAAATGGACCTCTTCATGTAAAATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257575.9
CDS-3UTR TCA 90 bp GACATTAAAACACCAAAGGCAGCTGTTTGTCCTACAGCAGAAGTCCTAAAAGATTACAGGGAGGCTGAGTaGCTTCCCAAAGTAATAAAG +
Preference number: 4 (lower is better)
Translates to: DIKTPKAAVCPTAEVLKDYREAE*LPKVIK
Trigger: CTTTATTACTTTGGGAAGTCACTCAGCCTCCCTGTA...ATCTTTTAGGACTTCTGCTGTAGGACAAACAGCTGCCTTTGGTGTTTTAATGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257575.9
ENST00000407967.7
CDS-3UTR TCA 90 bp GACTGTTCTATTTCCTTACACACCTGCACTTTCATCAATCTTCTCCAGCTCCAAATGGTATTTATTGGCTaGAGGGTACTTTGGGAGACA +
Preference number: 4 (lower is better)
Translates to: DCSISLHTCTFINLLQLQMVFIG*RVLWET
Trigger: TGTCTCCCAAAGTACCCTTCAGCCAATAAATACCAT...TTGGAGCTGGAGAAGATTGATGAAAGTGCAGGTGTGTAAGGAAATAGAACAGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257575.9
CDS-3UTR GCA 90 bp ACTTTCATCAATCTTCTCCAGCTCCAATTTCTTGTGCCCCTTCAACAGCATCTGGCATGGCTCACTCTTTaGAGTGTTAGAGAATTTTGT +
Preference number: 4 (lower is better)
Translates to: TFINLLQLQFLVPLQQHLAWLTL*SVREFC
Trigger: ACAAAATTCTCTAACACTGCAAAGAGTGAGCCATGC...CAGATGCTGTTGAAGGGGCACAAGAAATTGGAGCTGGAGAAGATTGATGAAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257575.9
CDS-3UTR GCA 90 bp TTTGGAATCAGAATTCCAGGTCTGACTCCCAGCAGACTGTTCTATTTCCTTACATCTGTGTCCAAAGCTTaGCTTTCTTATTCCCTCACA +
Preference number: 4 (lower is better)
Translates to: FGIRIPGLTPSRLFYFLTSVSKA*LSYSLT
Trigger: TGTGAGGGAATAAGAAAGGCAAGCTTTGGACACAGA...TGTAAGGAAATAGAACAGTCTGCTGGGAGTCAGACCTGGAATTCTGATTCCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257575.9
CDS-3UTR GCA 90 bp TGTTTTGGTGGCATGGGCATAATTGGAGAAACCATTGGGGTATTCACTAGTAACTCTGTGTCCAAAGCTTaGCTTTCTTATTCCCTCACA +
Preference number: 4 (lower is better)
Translates to: CFGGMGIIGETIGVFTSNSVSKA*LSYSLT
Trigger: TGTGAGGGAATAAGAAAGGCAAGCTTTGGACACAGA...GTTACTAGTGAATACCCCAATGGTTTCTCCAATTATGCCCATGCCACCAAAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257575.9
ENST00000407967.7
CDS-3UTR GCA 90 bp TCCCAAAGTAATAAAGAGTTTGGAATCAGAATTCCAGGTCTGACTCCCAGCAGAGTCTTCCTAACACTCTaGACATCATTCTTCTCTTCC +
Preference number: 4 (lower is better)
Translates to: SQSNKEFGIRIPGLTPSRVFLTL*TSFFSS
Trigger: GGAAGAGAAGAATGATGTGCAGAGTGTTAGGAAGAC...TCTGCTGGGAGTCAGACCTGGAATTCTGATTCCAAACTCTTTATTACTTTGGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257575.9
ENST00000407967.7
CDS-3UTR CCA 90 bp TATTGTTTTGGTGGCATGGGCATAATTGGAGAAACCATTGGGGTATTCACTAGTGTCCTTGACTTGGAGTaGAGAAGGAAGATGCATCTA +
Preference number: 4 (lower is better)
Translates to: YCFGGMGIIGETIGVFTSVLDLE*RRKMHL
Trigger: TAGATGCATCTTCCTTCTCCACTCCAAGTCAAGGAC...ACTAGTGAATACCCCAATGGTTTCTCCAATTATGCCCATGCCACCAAAACAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257575.9
CDS-3UTR CCA 90 bp GATTGTAACATCATGGCCATCGCCATAGTAACGGAGCTTGAAAGATGCTACACTCTAGCCTGGACAACCTaGATTTTTATTAGAAACCTC +
Preference number: 4 (lower is better)
Translates to: DCNIMAIAIVTELERCYTLAWTT*IFIRNL
Trigger: GAGGTTTCTAATAAAAATCCAGGTTGTCCAGGCTAG...AGTGTAGCATCTTTCAAGCTCCGTTACTATGGCGATGGCCATGATGTTACAATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000257575.9
CDS-3UTR CCA 90 bp TCCCAAAGTAATAAAGAGTTTGGAATCAGAATTCCAGGTCTGACTCCCAGCAGAGATTATTCAGGCAAGTaGGATTGTAACATCATGGCC +
Preference number: 4 (lower is better)
Translates to: SQSNKEFGIRIPGLTPSRDYSGK*DCNIMA
Trigger: GGCCATGATGTTACAATCCCACTTGCCTGAATAATC...TCTGCTGGGAGTCAGACCTGGAATTCTGATTCCAAACTCTTTATTACTTTGGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257575.9
ENST00000392549.7
CDS-3UTR CCA 90 bp GATTATTCAGGCAAGTGGGATTGTAACATCATGGCCATCGCCATAGTAACGGAGGTTTTATTGTTTTGGTaGCATGGGCATAATTGGAGA +
Preference number: 4 (lower is better)
Translates to: DYSGKWDCNIMAIAIVTEVLLFW*HGHNWR
Trigger: TCTCCAATTATGCCCATGCCACCAAAACAATAAAAC...CTCCGTTACTATGGCGATGGCCATGATGTTACAATCCCACTTGCCTGAATAATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257575.9
ENST00000392549.7
CDS-3UTR CCA 90 bp AAAACACCAAAGGCAGCTGTTTGTCCTACAGCAGAAGTCCTAAAAGATTCCAGGACAGATGGTATTTATTaGCTGAAGGGTACTTTGGGA +
Preference number: 4 (lower is better)
Translates to: KTPKAAVCPTAEVLKDSRTDGIY*LKGTLG
Trigger: TCCCAAAGTACCCTTCAGCCAATAAATACCATCTGT...CCTGGAATCTTTTAGGACTTCTGCTGTAGGACAAACAGCTGCCTTTGGTGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257575.9
ENST00000407967.7
CDS-3UTR TCA 90 bp TTTGGGACCTTAAGTCATTACAGGTATATGGTGGGGCCCAACAACTGTATTTTGCCAACAACTGTATTTTaGAAATACTTTGGGCCAGGT +
Preference number: 4 (lower is better)
Translates to: FGTLSHYRYMVGPNNCILPTTVF*KYFGPG
Trigger: ACCTGGCCCAAAGTATTTTCAAAATACAGTTGTTGG...CAAAATACAGTTGTTGGGCCCCACCATATACCTGTAATGACTTAAGGTCCCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000257575.9
CDS-3UTR GCA 90 bp CCAACAGATGGTATTTATTGGCTGAAGGGTACTTTGGGAGACATTAAAACACCACCAGAGGGTAGGGCATaGACTAATAAAATCCTAAAC +
Preference number: 4 (lower is better)
Translates to: PTDGIYWLKGTLGDIKTPPEGRA*TNKILN
Trigger: GTTTAGGATTTTATTAGTGCATGCCCTACCCTCTGG...TGGTGTTTTAATGTCTCCCAAAGTACCCTTCAGCCAATAAATACCATCTGTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257575.9
ENST00000407967.7
CDS-3UTR CCA 90 bp AGCCTGTGTTGGAAACACTCCTCATCAGACACTGTTTTCCCTAGGACAGAAGTTTTTGTTTTATTGTTTTaGTGGCATGGGCATAATTGG +
Preference number: 4 (lower is better)
Translates to: SLCWKHSSSDTVFPRTEVFVLLF*WHGHNW
Trigger: CCAATTATGCCCATGCCACCAAAACAATAAAACAAA...AACTTCTGTCCTAGGGAAAACAGTGTCTGATGAGGAGTGTTTCCAACACAGGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000257575.9
ENST00000407967.7
CDS-3UTR CCA 90 bp ATAAGGGCAGGATACTGTGAACCTGATACTCGATTAACCCTACTTACAACAAATGATTATTCAGGCAAGTaGGATTGTAACATCATGGCC +
Preference number: 4 (lower is better)
Translates to: IRAGYCEPDTRLTLLTTNDYSGK*DCNIMA
Trigger: GGCCATGATGTTACAATCCCACTTGCCTGAATAATC...ATTTGTTGTAAGTAGGGTTAATCGAGTATCAGGTTCACAGTATCCTGCCCTTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257575.9
CDS-3UTR CCA 90 bp TGTGTTGGAAACACTCCTCATCAGACACTGTTTTCCCTAGGACAGAAGTTAAATGTTTTATTGTTTTGGTaGCATGGGCATAATTGGAGA +
Preference number: 4 (lower is better)
Translates to: CVGNTPHQTLFSLGQKLNVLLFW*HGHNWR
Trigger: TCTCCAATTATGCCCATGCCACCAAAACAATAAAAC...ATTTAACTTCTGTCCTAGGGAAAACAGTGTCTGATGAGGAGTGTTTCCAACACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000257575.9
ENST00000407967.7
CDS CCA 90 bp GCCTGGGCAGCATGTGACTTCCGATGCTTCCGGCCTCCTATTGGGTaGTTTCTTGGCGTCGCCGGGTCCGGCGCTAGGACCCGGGCACAG +
Preference number: 5 (lower is better)
Translates to: AWAACDFRCFRPPIG*FLGVAGSGARTRAQ
Trigger: CTGTGCCCGGGTCCTAGCGCCGGACCCGGCGACGCCAAGAAACCACCCAATAGGAGGCCGGAAGCATCGGAAGTCACATGCTGCCCAGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615278.1
CDS CCA 90 bp GTGTCCTCAGTGTTCGGTCCTAGTACACCTGGAAGTGTGCGGACGTaGCGCCGTCCTTCCAGCAGCGCAGGGTGTCCACGGCGACCGAGC +
Preference number: 5 (lower is better)
Translates to: VSSVFGPSTPGSVRT*RRPSSSAGCPRRPS
Trigger: GCTCGGTCGCCGTGGACACCCTGCGCTGCTGGAAGGACGGCGCCACGTCCGCACACTTCCAGGTGTACTAGGACCGAACACTGAGGACAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257575.9
ENST00000392549.7
CDS TCA 90 bp GGCCTGTTTCTCAGGAAGCCCCCGCAGGGCTGGGTCCGGGCATGCTaGCCCTTGGCGTCCTTCTGGGTGTCCTCAGTGTTCGGTCCTAGT +
Preference number: 5 (lower is better)
Translates to: GLFLRKPPQGWVRAC*PLASFWVSSVFGPS
Trigger: ACTAGGACCGAACACTGAGGACACCCAGAAGGACGCCAAGGGTCAGCATGCCCGGACCCAGCCCTGCGGGGGCTTCCTGAGAAACAGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000257575.9
CDS GCA 90 bp CCTTCTGGGTGTCCTCAGTGTTCGGTCCTAGTACACCTGGAAGTGTaGGGACGTGGCGCCGTCCTTCCAGCAGCGCAGGGTGTCCACGGC +
Preference number: 5 (lower is better)
Translates to: PSGCPQCSVLVHLEV*GRGAVLPAAQGVHG
Trigger: GCCGTGGACACCCTGCGCTGCTGGAAGGACGGCGCCACGTCCGCACACTTCCAGGTGTACTAGGACCGAACACTGAGGACACCCAGAAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257575.9
ENST00000392549.7
CDS GCA 90 bp GCCAAGCCAATCACCCGCGCAGCCTGGGCAGCATGTGACTTCCGATaGTTCCGGCCTCCTATTGGGTGGTTTCTTGGCGTCGCCGGGTCC +
Preference number: 5 (lower is better)
Translates to: AKPITRAAWAACDFR*FRPPIGWFLGVAGS
Trigger: GGACCCGGCGACGCCAAGAAACCACCCAATAGGAGGCCGGAAGCATCGGAAGTCACATGCTGCCCAGGCTGCGCGGGTGATTGGCTTGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615278.1
CDS CCA 90 bp TTCTCAGGAAGCCCCCGCAGGGCTGGGTCCGGGCATGCTGACCCTTaGCGTCCTTCTGGGTGTCCTCAGTGTTCGGTCCTAGTACACCTG +
Preference number: 5 (lower is better)
Translates to: FSGSPRRAGSGHADP*RPSGCPQCSVLVHL
Trigger: CAGGTGTACTAGGACCGAACACTGAGGACACCCAGAAGGACGCCAAGGGTCAGCATGCCCGGACCCAGCCCTGCGGGGGCTTCCTGAGAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000257575.9
CDS GCA 90 bp TCCCAGAGAGGACAGGCCTCCCCCTCCTCTTCGTCTCCAGAGGGATaGACAGTCAGGGGAGCTTGCCAGAGACTCCAAACCTGCCCAGAC +
Preference number: 5 (lower is better)
Translates to: SQRGQASPSSSSPEG*TVRGACQRLQTCPD
Trigger: GTCTGGGCAGGTTTGGAGTCTCTGGCAAGCTCCCCTGACTGTGCATCCCTCTGGAGACGAAGAGGAGGGGGAGGCCTGTCCTCTCTGGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000257575.9
ENST00000392549.7
ENST00000407967.7
ENST00000547718.5
ENST00000552920.1
CDS CCA 90 bp GCTGGCACAGGAGAATCAGAGGCTCTCGGAACTCGGCCTGACAGATaGCGCAGATGTCACCAGCTTCTGTGCACTGCTGCCCGGTGGCTC +
Preference number: 5 (lower is better)
Translates to: AGTGESEALGTRPDR*RRCHQLLCTAARWL
Trigger: GAGCCACCGGGCAGCAGTGCACAGAAGCTGGTGACATCTGCGCCATCTGTCAGGCCGAGTTCCGAGAGCCTCTGATTCTCCTGTGCCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257575.9
ENST00000392549.7
CDS CCA 90 bp CAGCCGCATCATTCAGGTCCAGCCAAGCCAATCACCCGCGCAGCCTaGGCAGCATGTGACTTCCGATGCTTCCGGCCTCCTATTGGGTGG +
Preference number: 5 (lower is better)
Translates to: QPHHSGPAKPITRAA*AACDFRCFRPPIGW
Trigger: CCACCCAATAGGAGGCCGGAAGCATCGGAAGTCACATGCTGCCCAGGCTGCGCGGGTGATTGGCTTGGCTGGACCTGAATGATGCGGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615278.1
CDS-3UTR CAA 90 bp GGGAACGAGCTGGTGGGGAGGCTGCCTGATAAGCCCGAGAAGAGCGCTGGTGGGGGAATGTTATCCGTGTaGCTGCTGTGGCGTCTCTGC +
Preference number: 5 (lower is better)
Translates to: GNELVGRLPDKPEKSAGGGMLSV*LLWRLC
Trigger: GCAGAGACGCCACAGCAGCAACACGGATAACATTCC...CCCACCAGCGCTCTTCTCGGGCTTATCAGGCAGCCTCCCCACCAGCTCGTTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000547718.5
CDS GCA 90 bp CTCAGAGGAGCATCGCCTGCATCACTTGGACTGGAAGCCGGCAGGTaGACTTCGGGAACAACGTCGCGAGCGCTTTTCATCCCTGCCCAG +
Preference number: 5 (lower is better)
Translates to: LRGASPASLGLEAGR*TSGTTSRALFIPAQ
Trigger: CTGGGCAGGGATGAAAAGCGCTCGCGACGTTGTTCCCGAAGTGCACCTGCCGGCTTCCAGTCCAAGTGATGCAGGCGATGCTCCTCTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615278.1
CDS GCA 90 bp GGTTCAAGTTGCGCCCCTGGGGCCCGTTACAGGACTGCACCGAAATaGACTCAGAGGAGCATCGCCTGCATCACTTGGACTGGAAGCCGG +
Preference number: 5 (lower is better)
Translates to: GSSCAPGARYRTAPK*TQRSIACITWTGSR
Trigger: CCGGCTTCCAGTCCAAGTGATGCAGGCGATGCTCCTCTGAGTGCATTTCGGTGCAGTCCTGTAACGGGCCCCAGGGGCGCAACTTGAACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615278.1
CDS-3UTR CAA 90 bp CCCGAACTGTTTTCCACTTCCACACCATGGCTGCGGCTGTCCCCTCTTCCTGCCACAGCCAGGATGATCTaGGGCAGGGCCACGATGAGG +
Preference number: 5 (lower is better)
Translates to: PELFSTSTPWLRLSPLPATARMI*GRATMR
Trigger: CCTCATCGTGGCCCTGCCCAAGATCATCCTGGCTGT...GGCAGGAAGAGGGGACAGCCGCAGCCATGGTGTGGAAGTGGAAAACAGTTCGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677328.1
CDS TCA 90 bp AACACGTGCTGGCACAGGAGAATCAGAGGCTCTCGGAACTCGGCCTaGCAGATGGCGCAGATGTCACCAGCTTCTGTGCACTGCTGCCCG +
Preference number: 5 (lower is better)
Translates to: NTCWHRRIRGSRNSA*QMAQMSPASVHCCP
Trigger: CGGGCAGCAGTGCACAGAAGCTGGTGACATCTGCGCCATCTGTCAGGCCGAGTTCCGAGAGCCTCTGATTCTCCTGTGCCAGCACGTGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257575.9
ENST00000392549.7
CDS TCA 90 bp TTCAGGTCCAGCCAAGCCAATCACCCGCGCAGCCTGGGCAGCATGTaGCTTCCGATGCTTCCGGCCTCCTATTGGGTGGTTTCTTGGCGT +
Preference number: 5 (lower is better)
Translates to: FRSSQANHPRSLGSM*LPMLPASYWVVSWR
Trigger: ACGCCAAGAAACCACCCAATAGGAGGCCGGAAGCATCGGAAGTCACATGCTGCCCAGGCTGCGCGGGTGATTGGCTTGGCTGGACCTGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615278.1
CDS CCA 90 bp AAAGCCAAGCAAAATACAGGCGTAGAGGAAGCAGCAGCAAGGCCCTaGGAGCTCACTGGGTCCCCCAGCAGCCCATTCCTGTCTGGCACC +
Preference number: 5 (lower is better)
Translates to: KAKQNTGVEEAAARP*ELTGSPSSPFLSGT
Trigger: GGTGCCAGACAGGAATGGGCTGCTGGGGGACCCAGTGAGCTCCCAGGGCCTTGCTGCTGCTTCCTCTACGCCTGTATTTTGCTTGGCTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000677328.1
CDS TCA 90 bp GTTGACGACACTGGAGGTAGGCATTCGGGAATCCTCAGGGGGATGTaGCCAATGGATCCCAGAGAGGACAGGCCTCCCCCTCCTCTTCGT +
Preference number: 5 (lower is better)
Translates to: VDDTGGRHSGILRGM*PMDPREDRPPPPLR
Trigger: ACGAAGAGGAGGGGGAGGCCTGTCCTCTCTGGGATCCATTGGTCACATCCCCCTGAGGATTCCCGAATGCCTACCTCCAGTGTCGTCAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000257575.9
ENST00000392549.7
ENST00000407967.7
ENST00000547718.5
ENST00000552920.1
CDS TCA 90 bp GCACATAGAGGGTGTTCCCCGCCAGAAAGGCCAGGATCCACAAGATaGCCAGCACTGACCTCTTCTCCCTCACGGGGGAAGCTGAAGGTC +
Preference number: 5 (lower is better)
Translates to: AHRGCSPPERPGSTR*PALTSSPSRGKLKV
Trigger: GACCTTCAGCTTCCCCCGTGAGGGAGAAGAGGTCAGTGCTGGTCATCTTGTGGATCCTGGCCTTTCTGGCGGGGAACACCCTCTATGTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000677328.1
CDS GCA 90 bp GCCCGTTACAGGACTGCACCGAAATGCACTCAGAGGAGCATCGCCTaGATCACTTGGACTGGAAGCCGGCAGGTGCACTTCGGGAACAAC +
Preference number: 5 (lower is better)
Translates to: ARYRTAPKCTQRSIA*ITWTGSRQVHFGNN
Trigger: GTTGTTCCCGAAGTGCACCTGCCGGCTTCCAGTCCAAGTGATGCAGGCGATGCTCCTCTGAGTGCATTTCGGTGCAGTCCTGTAACGGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615278.1
CDS GCA 90 bp TGCTTGCGATGGTTCAAGTTGCGCCCCTGGGGCCCGTTACAGGACTaGACCGAAATGCACTCAGAGGAGCATCGCCTGCATCACTTGGAC +
Preference number: 5 (lower is better)
Translates to: CLRWFKLRPWGPLQD*TEMHSEEHRLHHLD
Trigger: GTCCAAGTGATGCAGGCGATGCTCCTCTGAGTGCATTTCGGTGCAGTCCTGTAACGGGCCCCAGGGGCGCAACTTGAACCATCGCAAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615278.1
CDS CCA 90 bp ACACTGGAGGTAGGCATTCGGGAATCCTCAGGGGGATGTGACCAATaGATCCCAGAGAGGACAGGCCTCCCCCTCCTCTTCGTCTCCAGA +
Preference number: 5 (lower is better)
Translates to: TLEVGIRESSGGCDQ*IPERTGLPLLFVSR
Trigger: TCTGGAGACGAAGAGGAGGGGGAGGCCTGTCCTCTCTGGGATCCATTGGTCACATCCCCCTGAGGATTCCCGAATGCCTACCTCCAGTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000257575.9
ENST00000392549.7
ENST00000407967.7
ENST00000547718.5
ENST00000552920.1
CDS CCA 90 bp TGCACCGAAATGCACTCAGAGGAGCATCGCCTGCATCACTTGGACTaGAAGCCGGCAGGTGCACTTCGGGAACAACGTCGCGAGCGCTTT +
Preference number: 5 (lower is better)
Translates to: CTEMHSEEHRLHHLD*KPAGALREQRRERF
Trigger: AAAGCGCTCGCGACGTTGTTCCCGAAGTGCACCTGCCGGCTTCCAGTCCAAGTGATGCAGGCGATGCTCCTCTGAGTGCATTTCGGTGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615278.1
CDS CCA 90 bp CGCACCGAGACTTTTCGATGCTTGCGATGGTTCAAGTTGCGCCCCTaGGGCCCGTTACAGGACTGCACCGAAATGCACTCAGAGGAGCAT +
Preference number: 5 (lower is better)
Translates to: RTETFRCLRWFKLRP*GPLQDCTEMHSEEH
Trigger: ATGCTCCTCTGAGTGCATTTCGGTGCAGTCCTGTAACGGGCCCCAGGGGCGCAACTTGAACCATCGCAAGCATCGAAAAGTCTCGGTGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615278.1
CDS-3UTR CAA 90 bp CCGAGTCTCAGCAGCCCGGATGTCTTCCTAACACTCTGCACATCATTCTTCTCTGACAGGGGCGGGACTTaGGGGTCAGAGGTGGTGGAG +
Preference number: 5 (lower is better)
Translates to: PSLSSPDVFLTLCTSFFSDRGGT*GSEVVE
Trigger: CTCCACCACCTCTGACCCCAAAGTCCCGCCCCTGTC...AGAGAAGAATGATGTGCAGAGTGTTAGGAAGACATCCGGGCTGCTGAGACTCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257575.9
CDS TCA 90 bp CCTTGGAGTGACTGCTTCCTTGCCTGCAACACCCCCACTGGACTGTaGGCTTTCAGCGTGAAACTCCTGGTCTGCAGAACCCCATGCCTA +
Preference number: 5 (lower is better)
Translates to: PWSDCFLACNTPTGL*AFSVKLLVCRTPCL
Trigger: TAGGCATGGGGTTCTGCAGACCAGGAGTTTCACGCTGAAAGCTCACAGTCCAGTGGGGGTGTTGCAGGCAAGGAAGCAGTCACTCCAAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000677328.1
CDS-3UTR CAA 90 bp GCCCTTGTGGCTTTGCGATGCCTGGGTAACTCCCAGCCCTGCTTTAAAACTCAGGCCACGATGAGGCACTaGAGGGCGATGGTGATGTAC +
Preference number: 5 (lower is better)
Translates to: ALVALRCLGNSQPCFKTQATMRH*RAMVMY
Trigger: GTACATCACCATCGCCCTCAAGTGCCTCATCGTGGC...CTGAGTTTTAAAGCAGGGCTGGGAGTTACCCAGGCATCGCAAAGCCACAAGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677328.1
CDS-3UTR CAA 90 bp CTACACTGCCCTGGAACAGACGTCTTGCTGGGTACCAGGAGAGAGCCAGGGATGGCTTCCCCTTCCCACTaGATTATTCAGGCAAGTGGG +
Preference number: 5 (lower is better)
Translates to: LHCPGTDVLLGTRREPGMASPSH*IIQASG
Trigger: CCCACTTGCCTGAATAATCAAGTGGGAAGGGGAAGC...CATCCCTGGCTCTCTCCTGGTACCCAGCAAGACGTCTGTTCCAGGGCAGTGTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257575.9
ENST00000392549.7
CDS CCA 90 bp GCACGAACTAAACCCTCTTCTTTGGCAGCTGGGAGGCGGATAGTCTaGGGCAGGTTTTCAAGCCCCTATCGCTCTCCACCTGGAAATGGT +
Preference number: 5 (lower is better)
Translates to: ARTKPSSLAAGRRIV*GRFSSPYRSPPGNG
Trigger: ACCATTTCCAGGTGGAGAGCGATAGGGGCTTGAAAACCTGCCCCAGACTATCCGCCTCCCAGCTGCCAAAGAAGAGGGTTTAGTTCGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677328.1
CDS-3UTR CAA 90 bp GAAAGATGCTACACTGCCCTGGAACAGACGTCTTGCTGGGTACCAGGAGAGAGCGCTAGTCTTGAACTCTaGACCTCAGGTGACCCGCCT +
Preference number: 5 (lower is better)
Translates to: ERCYTALEQTSCWVPGESASLEL*TSGDPP
Trigger: AGGCGGGTCACCTGAGGTCAAGAGTTCAAGACTAGC...GCTCTCTCCTGGTACCCAGCAAGACGTCTGTTCCAGGGCAGTGTAGCATCTTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257575.9
CDS-3UTR CAA 90 bp CTACACTGCCCTGGAACAGACGTCTTGCTGGGTACCAGGAGAGAGCCAGGGATGTCCAGCTCCAATTTCTaGTGCCCCTTCAACAGCATC +
Preference number: 5 (lower is better)
Translates to: LHCPGTDVLLGTRREPGMSSSNF*CPFNSI
Trigger: GATGCTGTTGAAGGGGCACAAGAAATTGGAGCTGGA...CATCCCTGGCTCTCTCCTGGTACCCAGCAAGACGTCTGTTCCAGGGCAGTGTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257575.9
ENST00000392549.7
CDS-3UTR CAA 90 bp CCCGAACTGTTTTCCACTTCCACACCATGGCTGCGGCTGTCCCCTCTTCCTGCCGGTGTCCAATATATCTaGGACTTGACAGCCAGGATG +
Preference number: 5 (lower is better)
Translates to: PELFSTSTPWLRLSPLPAGVQYI*DLTARM
Trigger: CATCCTGGCTGTCAAGTCCAAGATATATTGGACACC...GGCAGGAAGAGGGGACAGCCGCAGCCATGGTGTGGAAGTGGAAAACAGTTCGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677328.1
CDS TCA 90 bp GAGGATAACGCGGTAAACTGTGCAGCCAAGAGGTGCTGGATGAAGTaGAGTGGGCAGCGGACTGGCAGGAGACATGGATTCTGGGTTGAT +
Preference number: 5 (lower is better)
Translates to: EDNAVNCAAKRCWMK*SGQRTGRRHGFWVD
Trigger: ATCAACCCAGAATCCATGTCTCCTGCCAGTCCGCTGCCCACTTCACTTCATCCAGCACCTCTTGGCTGCACAGTTTACCGCGTTATCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552920.1
CDS-3UTR CAA 90 bp AGCCAAGGGGAAAGTCCTGGTTTGGTGGCACACAGGGGCAAATGTCCTGAATCCAGGAATATGAGGCTGTaGTACAGCTGCTGGGAGCTG +
Preference number: 5 (lower is better)
Translates to: SQGESPGLVAHRGKCPESRNMRL*YSCWEL
Trigger: CAGCTCCCAGCAGCTGTACAACAGCCTCATATTCCT...GGATTCAGGACATTTGCCCCTGTGTGCCACCAAACCAGGACTTTCCCCTTGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392549.7
CDS-3UTR CAA 90 bp ATCTTGGGCAGGGCCACGATGAGGCACTTGAGGGCGATGGTGATGTACTTCAGATCCAGCATCTCCAGGTaGGGCTTCAGGAATATGAGG +
Preference number: 5 (lower is better)
Translates to: ILGRATMRHLRAMVMYFRSSISR*GFRNMR
Trigger: CCTCATATTCCTGAAGCCCAACCTGGAGATGCTGGA...TCTGAAGTACATCACCATCGCCCTCAAGTGCCTCATCGTGGCCCTGCCCAAGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547718.5
CDS-3UTR CAA 90 bp TTTGCAGGGGAAGGAGGCACGCACTATACCACAGAACGAGAGAGGAAGATGAAGGCCACGATGAGGCACTaGAGGGCGATGGTGATGTAC +
Preference number: 5 (lower is better)
Translates to: FAGEGGTHYTTERERKMKATMRH*RAMVMY
Trigger: GTACATCACCATCGCCCTCAAGTGCCTCATCGTGGC...CTTCATCTTCCTCTCTCGTTCTGTGGTATAGTGCGTGCCTCCTTCCCCTGCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257575.9
CDS-3UTR CAA 90 bp AGAGAGCCAGGGATGCCAAGCCAAGGGGAAAGTCCTGGTTTGGTGGCACACAGGATGCCACTACCCTGGTaGGTGGAAACATCCATAACA +
Preference number: 5 (lower is better)
Translates to: REPGMPSQGESPGLVAHRMPLPW*VETSIT
Trigger: TGTTATGGATGTTTCCACCAACCAGGGTAGTGGCAT...CCTGTGTGCCACCAAACCAGGACTTTCCCCTTGGCTTGGCATCCCTGGCTCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257575.9
CDS-3UTR CAA 90 bp GTCCTGGTTTGGTGGCACACAGGGGCAAATGTCCTGAATCCTTGGCGTCCTTCTGCTTCCCCTTCCCACTaGATTATTCAGGCAAGTGGG +
Preference number: 5 (lower is better)
Translates to: VLVWWHTGANVLNPWRPSASPSH*IIQASG
Trigger: CCCACTTGCCTGAATAATCAAGTGGGAAGGGGAAGC...AGAAGGACGCCAAGGATTCAGGACATTTGCCCCTGTGTGCCACCAAACCAGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392549.7
CDS-3UTR CAA 90 bp AGCCAAGGGGAAAGTCCTGGTTTGGTGGCACACAGGGGCAAATGTCCTGAATCCAAATGTCCTGAATCCTaGGCGTCCTTCTGGGTGTCC +
Preference number: 5 (lower is better)
Translates to: SQGESPGLVAHRGKCPESKCPES*ASFWVS
Trigger: GGACACCCAGAAGGACGCCAAGGATTCAGGACATTT...GGATTCAGGACATTTGCCCCTGTGTGCCACCAAACCAGGACTTTCCCCTTGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392549.7
CDS TCA 90 bp ACTGGTTTAGGTGTCCATTCTCTGTTTTCCCAGAGGGCCTTGGAGTaGCTGCTTCCTTGCCTGCAACACCCCCACTGGACTGTGAGCTTT +
Preference number: 5 (lower is better)
Translates to: TGLGVHSLFSQRALE*LLPCLQHPHWTVSF
Trigger: AAAGCTCACAGTCCAGTGGGGGTGTTGCAGGCAAGGAAGCAGTCACTCCAAGGCCCTCTGGGAAAACAGAGAATGGACACCTAAACCAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000677328.1
CDS GCA 90 bp GGGGCCAGCCTTGGTCACAGCTTTCAGGTGGAATGTTATCCGTGTTaGTGCTGTGGCGTCTCTGCATCTTCCTTAACACCTGATTCACTG +
Preference number: 5 (lower is better)
Translates to: GASLGHSFQVECYPC*CCGVSASSLTPDSL
Trigger: CAGTGAATCAGGTGTTAAGGAAGATGCAGAGACGCCACAGCAGCAACACGGATAACATTCCACCTGAAAGCTGTGACCAAGGCTGGCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547718.5
CDS-3UTR CAA 90 bp TTTGCAGGGGAAGGAGGCACGCACTATACCACAGAACGAGAGAGGAAGATGAAGGGAATGTTATCCGTGTaGCTGCTGTGGCGTCTCTGC +
Preference number: 5 (lower is better)
Translates to: FAGEGGTHYTTERERKMKGMLSV*LLWRLC
Trigger: GCAGAGACGCCACAGCAGCAACACGGATAACATTCC...CTTCATCTTCCTCTCTCGTTCTGTGGTATAGTGCGTGCCTCCTTCCCCTGCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257575.9
CDS-3UTR CAA 90 bp GAGAGTGGCATTGTTCTTTTCCAACGGGGACTCCTGGCTGCTTTCGCACTGGTAAGGAATATGAGGCTGTaGTACAGCTGCTGGGAGCTG +
Preference number: 5 (lower is better)
Translates to: ESGIVLFQRGLLAAFALVRNMRL*YSCWEL
Trigger: CAGCTCCCAGCAGCTGTACAACAGCCTCATATTCCT...TACCAGTGCGAAAGCAGCCAGGAGTCCCCGTTGGAAAAGAACAATGCCACTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257575.9
ENST00000407967.7
CDS-3UTR CAA 90 bp GAGAGTGGCATTGTTCTTTTCCAACGGGGACTCCTGGCTGCTTTCGCACTGGTATCCAGCATCTCCAGGTaGGGCTTCAGGAATATGAGG +
Preference number: 5 (lower is better)
Translates to: ESGIVLFQRGLLAAFALVSSISR*GFRNMR
Trigger: CCTCATATTCCTGAAGCCCAACCTGGAGATGCTGGA...TACCAGTGCGAAAGCAGCCAGGAGTCCCCGTTGGAAAAGAACAATGCCACTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257575.9
ENST00000407967.7
CDS-3UTR CAA 90 bp CTTGTGGCTTTGCGATGCCTGGGTAACTCCCAGCCCTGCTTTAAAACTCAGCTCTCCAGCATCTCCAGGTaGGGCTTCAGGAATATGAGG +
Preference number: 5 (lower is better)
Translates to: LVALRCLGNSQPCFKTQLSSISR*GFRNMR
Trigger: CCTCATATTCCTGAAGCCCAACCTGGAGATGCTGGA...GAGCTGAGTTTTAAAGCAGGGCTGGGAGTTACCCAGGCATCGCAAAGCCACAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677328.1
CDS-3UTR CAA 90 bp TTACCTCTCTTTCTTCTAATCCCGAGTCTCAGCAGCCCGGATGTCTTCCTAACAACAGCCAGGATGATCTaGGGCAGGGCCACGATGAGG +
Preference number: 5 (lower is better)
Translates to: LPLFLLIPSLSSPDVFLTTARMI*GRATMR
Trigger: CCTCATCGTGGCCCTGCCCAAGATCATCCTGGCTGT...TGTTAGGAAGACATCCGGGCTGCTGAGACTCGGGATTAGAAGAAAGAGAGGTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257575.9
ENST00000407967.7
CDS-3UTR CAA 90 bp GAAAGATGCTACACTGCCCTGGAACAGACGTCTTGCTGGGTACCAGGAGAGAGCTCACCCATGATGTATTaGTACCACAGCTGGATGGGG +
Preference number: 5 (lower is better)
Translates to: ERCYTALEQTSCWVPGESSPMMY*YHSWMG
Trigger: CCCCATCCAGCTGTGGTACAAATACATCATGGGTGA...GCTCTCTCCTGGTACCCAGCAAGACGTCTGTTCCAGGGCAGTGTAGCATCTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257575.9
ENST00000392549.7
CDS-3UTR CAA 90 bp CTTGAAAGATGCTACACTGCCCTGGAACAGACGTCTTGCTGGGTACCAGGAGAGTTCTCTGTAATGCCATaGGCGCCAGCCTGTTGTGCT +
Preference number: 5 (lower is better)
Translates to: LERCYTALEQTSCWVPGEFSVMP*APACCA
Trigger: AGCACAACAGGCTGGCGCCAATGGCATTACAGAGAA...CTCTCCTGGTACCCAGCAAGACGTCTGTTCCAGGGCAGTGTAGCATCTTTCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257575.9
CDS-3UTR CAA 90 bp GAGCTTGAAAGATGCTACACTGCCCTGGAACAGACGTCTTGCTGGGTACCAGGACATTTCTCCTGGGGCTaGCATGGTAATCTGCCCACT +
Preference number: 5 (lower is better)
Translates to: ELERCYTALEQTSCWVPGHFSWG*HGNLPT
Trigger: AGTGGGCAGATTACCATGCAAGCCCCAGGAGAAATG...TCCTGGTACCCAGCAAGACGTCTGTTCCAGGGCAGTGTAGCATCTTTCAAGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257575.9
CDS-3UTR CAA 90 bp TCTGCCCCTGTGTGTCCCCCACATGTTACATTCTTTACAGTGTTAACAGGCATGCACAGTCAGGGGAGCTaGCCAGAGACTCCAAACCTG +
Preference number: 5 (lower is better)
Translates to: SAPVCPPHVTFFTVLTGMHSQGS*PETPNL
Trigger: CAGGTTTGGAGTCTCTGGCAAGCTCCCCTGACTGTG...CATGCCTGTTAACACTGTAAAGAATGTAACATGTGGGGGACACACAGGGGCAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000257575.9
ENST00000407967.7
CDS-3UTR CAA 90 bp TTGAGAGTCACTCACTCACCTACCCTGAGCCACTGGGCAGATTCTTATTCTGCCAGGAATATGAGGCTGTaGTACAGCTGCTGGGAGCTG +
Preference number: 5 (lower is better)
Translates to: LRVTHSPTLSHWADSYSARNMRL*YSCWEL
Trigger: CAGCTCCCAGCAGCTGTACAACAGCCTCATATTCCT...GGCAGAATAAGAATCTGCCCAGTGGCTCAGGGTAGGTGAGTGAGTGACTCTCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677328.1
CDS-3UTR CAA 90 bp GAGAGTGGCATTGTTCTTTTCCAACGGGGACTCCTGGCTGCTTTCGCACTGGTATCACCCATGATGTATTaGTACCACAGCTGGATGGGG +
Preference number: 5 (lower is better)
Translates to: ESGIVLFQRGLLAAFALVSPMMY*YHSWMG
Trigger: CCCCATCCAGCTGTGGTACAAATACATCATGGGTGA...TACCAGTGCGAAAGCAGCCAGGAGTCCCCGTTGGAAAAGAACAATGCCACTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257575.9
ENST00000407967.7
CDS-3UTR CAA 90 bp TCCCGATGCACACAGCAATGCCGAGCTTATGCTGAAAGCACAGTTTGGCCAGGATCACCCATGATGTATTaGTACCACAGCTGGATGGGG +
Preference number: 5 (lower is better)
Translates to: SRCTQQCRAYAESTVWPGSPMMY*YHSWMG
Trigger: CCCCATCCAGCTGTGGTACAAATACATCATGGGTGA...TCCTGGCCAAACTGTGCTTTCAGCATAAGCTCGGCATTGCTGTGTGCATCGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547718.5
CDS-3UTR CAA 90 bp GAGCTTGAAAGATGCTACACTGCCCTGGAACAGACGTCTTGCTGGGTACCAGGAGCAGGATGTAAGTGCTaGAGGCCTGTTTCTCAGGAA +
Preference number: 5 (lower is better)
Translates to: ELERCYTALEQTSCWVPGAGCKC*RPVSQE
Trigger: TTCCTGAGAAACAGGCCTCAAGCACTTACATCCTGC...TCCTGGTACCCAGCAAGACGTCTGTTCCAGGGCAGTGTAGCATCTTTCAAGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257575.9
CDS-3UTR CAA 90 bp CCTCTCTTTCTTCTAATCCCGAGTCTCAGCAGCCCGGATGTCTTCCTAACACTCCTTGAGCCCAGGAGTTaGAATCTAGCCTGGACAACC +
Preference number: 5 (lower is better)
Translates to: PLFLLIPSLSSPDVFLTLLEPRS*NLAWTT
Trigger: GGTTGTCCAGGCTAGATTCAAACTCCTGGGCTCAAG...GAGTGTTAGGAAGACATCCGGGCTGCTGAGACTCGGGATTAGAAGAAAGAGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257575.9
CDS-3UTR CAA 90 bp TTGAGAGTCACTCACTCACCTACCCTGAGCCACTGGGCAGATTCTTATTCTGCCACTAAACCCTCTTCTTaGGCAGCTGGGAGGCGGATA +
Preference number: 5 (lower is better)
Translates to: LRVTHSPTLSHWADSYSATKPSS*AAGRRI
Trigger: TATCCGCCTCCCAGCTGCCAAAGAAGAGGGTTTAGT...GGCAGAATAAGAATCTGCCCAGTGGCTCAGGGTAGGTGAGTGAGTGACTCTCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677328.1
CDS-3UTR CAA 90 bp CATTCTTCTCTTCCGAAGCTGATGCACCTATCATATCTGTGTCCAAAGCTTGCCCACAGTCAGGGGAGCTaGCCAGAGACTCCAAACCTG +
Preference number: 5 (lower is better)
Translates to: HSSLPKLMHLSYLCPKLAHSQGS*PETPNL
Trigger: CAGGTTTGGAGTCTCTGGCAAGCTCCCCTGACTGTG...GGCAAGCTTTGGACACAGATATGATAGGTGCATCAGCTTCGGAAGAGAAGAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257575.9
ENST00000407967.7
CDS-3UTR CAA 90 bp CTGCACTTTCATCAATCTTCTCCAGCTCCAATTTCTTGTGCCCCTTCAACAGCACACAGTCAGGGGAGCTaGCCAGAGACTCCAAACCTG +
Preference number: 5 (lower is better)
Translates to: LHFHQSSPAPISCAPSTAHSQGS*PETPNL
Trigger: CAGGTTTGGAGTCTCTGGCAAGCTCCCCTGACTGTG...TGCTGTTGAAGGGGCACAAGAAATTGGAGCTGGAGAAGATTGATGAAAGTGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000257575.9
ENST00000392549.7
ENST00000547718.5
CDS-3UTR CAA 90 bp CCCTTCAACAGCATCTGCAGGCAGGATGATCTTTCCGATAAAAACCAGTTGCAGGGAATGTTATCCGTGTaGCTGCTGTGGCGTCTCTGC +
Preference number: 5 (lower is better)
Translates to: PFNSICRQDDLSDKNQLQGMLSV*LLWRLC
Trigger: GCAGAGACGCCACAGCAGCAACACGGATAACATTCC...CTGCAACTGGTTTTTATCGGAAAGATCATCCTGCCTGCAGATGCTGTTGAAGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257575.9
ENST00000392549.7
CDS-3UTR CAA 90 bp GTAGCCTGTGTTGGAAACACTCCTCATCAGACACTGTTTTCCCTAGGACAGAAGGGAATGTTATCCGTGTaGCTGCTGTGGCGTCTCTGC +
Preference number: 5 (lower is better)
Translates to: VACVGNTPHQTLFSLGQKGMLSV*LLWRLC
Trigger: GCAGAGACGCCACAGCAGCAACACGGATAACATTCC...CTTCTGTCCTAGGGAAAACAGTGTCTGATGAGGAGTGTTTCCAACACAGGCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257575.9
ENST00000407967.7
CDS-3UTR CAA 90 bp CTGCACTTTCATCAATCTTCTCCAGCTCCAATTTCTTGTGCCCCTTCAACAGCAGCCACGATGAGGCACTaGAGGGCGATGGTGATGTAC +
Preference number: 5 (lower is better)
Translates to: LHFHQSSPAPISCAPSTAATMRH*RAMVMY
Trigger: GTACATCACCATCGCCCTCAAGTGCCTCATCGTGGC...TGCTGTTGAAGGGGCACAAGAAATTGGAGCTGGAGAAGATTGATGAAAGTGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257575.9
ENST00000392549.7
ENST00000547718.5
CDS-3UTR CAA 90 bp CATTCTTCTCTTCCGAAGCTGATGCACCTATCATATCTGTGTCCAAAGCTTGCCGCCACGATGAGGCACTaGAGGGCGATGGTGATGTAC +
Preference number: 5 (lower is better)
Translates to: HSSLPKLMHLSYLCPKLAATMRH*RAMVMY
Trigger: GTACATCACCATCGCCCTCAAGTGCCTCATCGTGGC...GGCAAGCTTTGGACACAGATATGATAGGTGCATCAGCTTCGGAAGAGAAGAATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257575.9
ENST00000407967.7
CDS-3UTR CAA 90 bp TTTCATCAATCTTCTCCAGCTCCAATTTCTTGTGCCCCTTCAACAGCATCTGCAACAGCCAGGATGATCTaGGGCAGGGCCACGATGAGG +
Preference number: 5 (lower is better)
Translates to: FHQSSPAPISCAPSTASATARMI*GRATMR
Trigger: CCTCATCGTGGCCCTGCCCAAGATCATCCTGGCTGT...TGCAGATGCTGTTGAAGGGGCACAAGAAATTGGAGCTGGAGAAGATTGATGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257575.9
ENST00000392549.7
CDS-3UTR CAA 90 bp CCGAGTCTCAGCAGCCCGGATGTCTTCCTAACACTCTGCACATCATTCTTCTCTTCCTGTTGCTTCCCTTaGGTTTTTCCTCAGGGTAGG +
Preference number: 5 (lower is better)
Translates to: PSLSSPDVFLTLCTSFFSSCCFP*VFPQGR
Trigger: CCTACCCTGAGGAAAAACCAAAGGGAAGCAACAGGA...AGAGAAGAATGATGTGCAGAGTGTTAGGAAGACATCCGGGCTGCTGAGACTCGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000257575.9
CDS-3UTR CAA 90 bp TTGGTTCCAGCAGGTAATACACTGGGTTCCGTCACCCTGGAGATGGCTACAGGGTGGCTGAAGGGTACTTaGGGAGACATTAAAACACCA +
Preference number: 5 (lower is better)
Translates to: LVPAGNTLGSVTLEMATGWLKGT*GDIKTP
Trigger: TGGTGTTTTAATGTCTCCCAAAGTACCCTTCAGCCA...CCCTGTAGCCATCTCCAGGGTGACGGAACCCAGTGTATTACCTGCTGGAACCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257575.9
ENST00000407967.7
CDS-3UTR CAA 90 bp CCAGGTCTGACTCCCAGCAGACTGTTCTATTTCCTTACACACCTGCACTTTCATAGGAATATGAGGCTGTaGTACAGCTGCTGGGAGCTG +
Preference number: 5 (lower is better)
Translates to: PGLTPSRLFYFLTHLHFHRNMRL*YSCWEL
Trigger: CAGCTCCCAGCAGCTGTACAACAGCCTCATATTCCT...ATGAAAGTGCAGGTGTGTAAGGAAATAGAACAGTCTGCTGGGAGTCAGACCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257575.9
ENST00000392549.7
ENST00000547718.5
CDS-3UTR CAA 90 bp ACTTCCCAAAGTAATAAAGAGTTTGGAATCAGAATTCCAGGTCTGACTCCCAGCACAGCCAGGATGATCTaGGGCAGGGCCACGATGAGG +
Preference number: 5 (lower is better)
Translates to: TSQSNKEFGIRIPGLTPSTARMI*GRATMR
Trigger: CCTCATCGTGGCCCTGCCCAAGATCATCCTGGCTGT...GCTGGGAGTCAGACCTGGAATTCTGATTCCAAACTCTTTATTACTTTGGGAAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257575.9
ENST00000392549.7
ENST00000407967.7
ENST00000547718.5
CDS-3UTR CAA 90 bp ACTGTTCTATTTCCTTACACACCTGCACTTTCATCAATCTTCTCCAGCTCCAATGGAAGACGTCCCCTTTaGCAGGGGAAGGAGGCACGC +
Preference number: 5 (lower is better)
Translates to: TVLFPYTPALSSIFSSSNGRRPL*QGKEAR
Trigger: GCGTGCCTCCTTCCCCTGCAAAAGGGGACGTCTTCC...ATTGGAGCTGGAGAAGATTGATGAAAGTGCAGGTGTGTAAGGAAATAGAACAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257575.9
CDS-3UTR CAA 90 bp TCTGCCCCTGTGTGTCCCCCACATGTTACATTCTTTACAGTGTTAACAGGCATGCTTGAGCCCAGGAGTTaGAGAACACCCTGGACAACA +
Preference number: 5 (lower is better)
Translates to: SAPVCPPHVTFFTVLTGMLEPRS*RTPWTT
Trigger: TGTTGTCCAGGGTGTTCTCAAACTCCTGGGCTCAAG...CATGCCTGTTAACACTGTAAAGAATGTAACATGTGGGGGACACACAGGGGCAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000257575.9
CDS-3UTR CAA 90 bp GATTGTAACATCATGGCCATCGCCATAGTAACGGAGCTTGAAAGATGCTACACTGGGGAAAGTCCTGGTTaGGTGGCACACAGGGGCAAA +
Preference number: 5 (lower is better)
Translates to: DCNIMAIAIVTELERCYTGESPG*VAHRGK
Trigger: TTTGCCCCTGTGTGCCACCAAACCAGGACTTTCCCC...AGTGTAGCATCTTTCAAGCTCCGTTACTATGGCGATGGCCATGATGTTACAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257575.9
ENST00000392549.7
CDS-3UTR CAA 90 bp AATCAGAATTCCAGGTCTGACTCCCAGCAGACTGTTCTATTTCCTTACACACCTGGGGAAAGTCCTGGTTaGGTGGCACACAGGGGCAAA +
Preference number: 5 (lower is better)
Translates to: NQNSRSDSQQTVLFPYTPGESPG*VAHRGK
Trigger: TTTGCCCCTGTGTGCCACCAAACCAGGACTTTCCCC...AGGTGTGTAAGGAAATAGAACAGTCTGCTGGGAGTCAGACCTGGAATTCTGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257575.9
ENST00000392549.7
CDS-3UTR CAA 90 bp GAAAGATGCTACACTGCCCTGGAACAGACGTCTTGCTGGGTACCAGGAGAGAGCTCCGATAAAAACCAGTaGCAGAAGTTCCTGTTGCTT +
Preference number: 5 (lower is better)
Translates to: ERCYTALEQTSCWVPGESSDKNQ*QKFLLL
Trigger: AAGCAACAGGAACTTCTGCAACTGGTTTTTATCGGA...GCTCTCTCCTGGTACCCAGCAAGACGTCTGTTCCAGGGCAGTGTAGCATCTTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257575.9
ENST00000392549.7
CDS-3UTR CAA 90 bp GATTATTCAGGCAAGTGGGATTGTAACATCATGGCCATCGCCATAGTAACGGAGAGGAATATGAGGCTGTaGTACAGCTGCTGGGAGCTG +
Preference number: 5 (lower is better)
Translates to: DYSGKWDCNIMAIAIVTERNMRL*YSCWEL
Trigger: CAGCTCCCAGCAGCTGTACAACAGCCTCATATTCCT...CTCCGTTACTATGGCGATGGCCATGATGTTACAATCCCACTTGCCTGAATAATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257575.9
ENST00000392549.7
CDS-3UTR CAA 90 bp TATTGTTTTGGTGGCATGGGCATAATTGGAGAAACCATTGGGGTATTCACTAGTACAGCCAGGATGATCTaGGGCAGGGCCACGATGAGG +
Preference number: 5 (lower is better)
Translates to: YCFGGMGIIGETIGVFTSTARMI*GRATMR
Trigger: CCTCATCGTGGCCCTGCCCAAGATCATCCTGGCTGT...ACTAGTGAATACCCCAATGGTTTCTCCAATTATGCCCATGCCACCAAAACAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257575.9
ENST00000392549.7
ENST00000407967.7
ENST00000547718.5
CDS-3UTR CAA 90 bp AAGAAAACCTCAGATGGGACGTTCCCCCAGAGGGTAGGGCATGCACTAATAAAATCACCCATGATGTATTaGTACCACAGCTGGATGGGG +
Preference number: 5 (lower is better)
Translates to: KKTSDGTFPQRVGHALIKSPMMY*YHSWMG
Trigger: CCCCATCCAGCTGTGGTACAAATACATCATGGGTGA...TTTTATTAGTGCATGCCCTACCCTCTGGGGGAACGTCCCATCTGAGGTTTTCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000257575.9
ENST00000407967.7
CDS-3UTR CAA 90 bp GATTGTAACATCATGGCCATCGCCATAGTAACGGAGCTTGAAAGATGCTACACTGGGGGTTTTGCCATGTaGGCCAGGCTAGTCTTGAAC +
Preference number: 5 (lower is better)
Translates to: DCNIMAIAIVTELERCYTGGFAM*ARLVLN
Trigger: GTTCAAGACTAGCCTGGCCAACATGGCAAAACCCCC...AGTGTAGCATCTTTCAAGCTCCGTTACTATGGCGATGGCCATGATGTTACAATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000257575.9
CDS-3UTR CAA 90 bp TTACCTCTCTTTCTTCTAATCCCGAGTCTCAGCAGCCCGGATGTCTTCCTAACAACCAAAGGCAGCTGTTaGTCCTACAGCAGAAGTCCT +
Preference number: 5 (lower is better)
Translates to: LPLFLLIPSLSSPDVFLTTKGSC*SYSRSP
Trigger: AGGACTTCTGCTGTAGGACAAACAGCTGCCTTTGGT...TGTTAGGAAGACATCCGGGCTGCTGAGACTCGGGATTAGAAGAAAGAGAGGTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257575.9
ENST00000407967.7
CDS-3UTR CAA 90 bp CAATCTTCTCCAGCTCCAATTTCTTGTGCCCCTTCAACAGCATCTGCAGGCAGGTGGCTGAAGGGTACTTaGGGAGACATTAAAACACCA +
Preference number: 5 (lower is better)
Translates to: QSSPAPISCAPSTASAGRWLKGT*GDIKTP
Trigger: TGGTGTTTTAATGTCTCCCAAAGTACCCTTCAGCCA...CCTGCCTGCAGATGCTGTTGAAGGGGCACAAGAAATTGGAGCTGGAGAAGATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257575.9
CDS-3UTR CAA 90 bp ACTGTTCTATTTCCTTACACACCTGCACTTTCATCAATCTTCTCCAGCTCCAATCACAGTCAGGGGAGCTaGCCAGAGACTCCAAACCTG +
Preference number: 5 (lower is better)
Translates to: TVLFPYTPALSSIFSSSNHSQGS*PETPNL
Trigger: CAGGTTTGGAGTCTCTGGCAAGCTCCCCTGACTGTG...ATTGGAGCTGGAGAAGATTGATGAAAGTGCAGGTGTGTAAGGAAATAGAACAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257575.9
ENST00000392549.7
ENST00000547718.5
CDS-3UTR CAA 90 bp AAAACACCAAAGGCAGCTGTTTGTCCTACAGCAGAAGTCCTAAAAGATTCCAGGTCCAGCATCTCCAGGTaGGGCTTCAGGAATATGAGG +
Preference number: 5 (lower is better)
Translates to: KTPKAAVCPTAEVLKDSRSSISR*GFRNMR
Trigger: CCTCATATTCCTGAAGCCCAACCTGGAGATGCTGGA...CCTGGAATCTTTTAGGACTTCTGCTGTAGGACAAACAGCTGCCTTTGGTGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257575.9
ENST00000407967.7
CDS-3UTR CAA 90 bp ACTGTTCTATTTCCTTACACACCTGCACTTTCATCAATCTTCTCCAGCTCCAATGCCACGATGAGGCACTaGAGGGCGATGGTGATGTAC +
Preference number: 5 (lower is better)
Translates to: TVLFPYTPALSSIFSSSNATMRH*RAMVMY
Trigger: GTACATCACCATCGCCCTCAAGTGCCTCATCGTGGC...ATTGGAGCTGGAGAAGATTGATGAAAGTGCAGGTGTGTAAGGAAATAGAACAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257575.9
ENST00000392549.7
ENST00000547718.5
CDS-3UTR CAA 90 bp CCAGGTCTGACTCCCAGCAGACTGTTCTATTTCCTTACACACCTGCACTTTCATAACTTTCCCTTGGACTaGACAGCCAGGATGATCTTG +
Preference number: 5 (lower is better)
Translates to: PGLTPSRLFYFLTHLHFHNFPLD*TARMIL
Trigger: CAAGATCATCCTGGCTGTCAAGTCCAAGGGAAAGTT...ATGAAAGTGCAGGTGTGTAAGGAAATAGAACAGTCTGCTGGGAGTCAGACCTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257575.9
ENST00000392549.7
ENST00000547718.5
CDS-3UTR CAA 90 bp TTACCTCTCTTTCTTCTAATCCCGAGTCTCAGCAGCCCGGATGTCTTCCTAACAAACTTTCCCTTGGACTaGACAGCCAGGATGATCTTG +
Preference number: 5 (lower is better)
Translates to: LPLFLLIPSLSSPDVFLTNFPLD*TARMIL
Trigger: CAAGATCATCCTGGCTGTCAAGTCCAAGGGAAAGTT...TGTTAGGAAGACATCCGGGCTGCTGAGACTCGGGATTAGAAGAAAGAGAGGTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257575.9
ENST00000407967.7
CDS-3UTR CAA 90 bp ATTAAAACACCAAAGGCAGCTGTTTGTCCTACAGCAGAAGTCCTAAAAGATTCCTGTACCAGGCCTCTGTaGGAAACTTGGCCCGCCCAT +
Preference number: 5 (lower is better)
Translates to: IKTPKAAVCPTAEVLKDSCTRPL*ETWPAH
Trigger: ATGGGCGGGCCAAGTTTCCAACAGAGGCCTGGTACA...GGAATCTTTTAGGACTTCTGCTGTAGGACAAACAGCTGCCTTTGGTGTTTTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257575.9
CDS-3UTR CAA 90 bp TTGAGAGTCACTCACTCACCTACCCTGAGCCACTGGGCAGATTCTTATTCTGCCCAATATATCTTGGACTaGACAGCCAGGATGATCTTG +
Preference number: 5 (lower is better)
Translates to: LRVTHSPTLSHWADSYSAQYILD*TARMIL
Trigger: CAAGATCATCCTGGCTGTCAAGTCCAAGATATATTG...GGCAGAATAAGAATCTGCCCAGTGGCTCAGGGTAGGTGAGTGAGTGACTCTCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677328.1
CDS TCA 90 bp AAACGCTTTTTAATCCTCTGCTCTGTACATCCCACTATGTCCCTTTaGAGGACCGCACCGAGACTTTTCGATGCTTGCGATGGTTCAAGT +
Preference number: 5 (lower is better)
Translates to: KRFLILCSVHPTMSL*RTAPRLFDACDGSS
Trigger: ACTTGAACCATCGCAAGCATCGAAAAGTCTCGGTGCGGTCCTTCAAAGGGACATAGTGGGATGTACAGAGCAGAGGATTAAAAAGCGTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000615278.1
CDS CCA 90 bp TGTTTGCAGGAGAAGTTTCCAACTTTATCTGGCGCTGAGTCAATTTaGAAAGCCAAGCAAAATACAGGCGTAGAGGAAGCAGCAGCAAGG +
Preference number: 5 (lower is better)
Translates to: CLQEKFPTLSGAESI*KAKQNTGVEEAAAR
Trigger: CCTTGCTGCTGCTTCCTCTACGCCTGTATTTTGCTTGGCTTTCCAAATTGACTCAGCGCCAGATAAAGTTGGAAACTTCTCCTGCAAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677328.1
CDS-3UTR CAA 90 bp GACTGTTCTATTTCCTTACACACCTGCACTTTCATCAATCTTCTCCAGCTCCAATCCAGCATCTCCAGGTaGGGCTTCAGGAATATGAGG +
Preference number: 5 (lower is better)
Translates to: DCSISLHTCTFINLLQLQSSISR*GFRNMR
Trigger: CCTCATATTCCTGAAGCCCAACCTGGAGATGCTGGA...TTGGAGCTGGAGAAGATTGATGAAAGTGCAGGTGTGTAAGGAAATAGAACAGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257575.9
ENST00000392549.7
ENST00000547718.5
CDS-3UTR CAA 90 bp CCCTTCAACAGCATCTGCAGGCAGGATGATCTTTCCGATAAAAACCAGTTGCAGCCTGTTGTGCTGAGGTaGACAATAAGAGAACAGACT +
Preference number: 5 (lower is better)
Translates to: PFNSICRQDDLSDKNQLQPVVLR*TIREQT
Trigger: AGTCTGTTCTCTTATTGTCAACCTCAGCACAACAGG...CTGCAACTGGTTTTTATCGGAAAGATCATCCTGCCTGCAGATGCTGTTGAAGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000257575.9
CDS-3UTR CAA 90 bp ACTTTCATCAATCTTCTCCAGCTCCAATTTCTTGTGCCCCTTCAACAGCATCTGTCCAGCTCCAATTTCTaGTGCCCCTTCAACAGCATC +
Preference number: 5 (lower is better)
Translates to: TFINLLQLQFLVPLQQHLSSSNF*CPFNSI
Trigger: GATGCTGTTGAAGGGGCACAAGAAATTGGAGCTGGA...CAGATGCTGTTGAAGGGGCACAAGAAATTGGAGCTGGAGAAGATTGATGAAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000257575.9
ENST00000392549.7
ENST00000547718.5
CDS-3UTR CAA 90 bp AATCAGAATTCCAGGTCTGACTCCCAGCAGACTGTTCTATTTCCTTACACACCTAACTTTCCCTTGGACTaGACAGCCAGGATGATCTTG +
Preference number: 5 (lower is better)
Translates to: NQNSRSDSQQTVLFPYTPNFPLD*TARMIL
Trigger: CAAGATCATCCTGGCTGTCAAGTCCAAGGGAAAGTT...AGGTGTGTAAGGAAATAGAACAGTCTGCTGGGAGTCAGACCTGGAATTCTGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257575.9
ENST00000392549.7
ENST00000547718.5
CDS-3UTR CAA 90 bp AGCCTGTGTTGGAAACACTCCTCATCAGACACTGTTTTCCCTAGGACAGAAGTTTTGCAGAAGTTCCTGTaGCTTCCCTTTGGTTTTTCC +
Preference number: 5 (lower is better)
Translates to: SLCWKHSSSDTVFPRTEVLQKFL*LPFGFS
Trigger: GGAAAAACCAAAGGGAAGCAACAGGAACTTCTGCAA...AACTTCTGTCCTAGGGAAAACAGTGTCTGATGAGGAGTGTTTCCAACACAGGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000257575.9
CDS-3UTR CAA 90 bp GATTATTCAGGCAAGTGGGATTGTAACATCATGGCCATCGCCATAGTAACGGAGTTGCAGAAGTTCCTGTaGCTTCCCTTTGGTTTTTCC +
Preference number: 5 (lower is better)
Translates to: DYSGKWDCNIMAIAIVTELQKFL*LPFGFS
Trigger: GGAAAAACCAAAGGGAAGCAACAGGAACTTCTGCAA...CTCCGTTACTATGGCGATGGCCATGATGTTACAATCCCACTTGCCTGAATAATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257575.9
ENST00000392549.7
CDS-3UTR CAA 90 bp TCCCAAAGTAATAAAGAGTTTGGAATCAGAATTCCAGGTCTGACTCCCAGCAGATCCAGCTCCAATTTCTaGTGCCCCTTCAACAGCATC +
Preference number: 5 (lower is better)
Translates to: SQSNKEFGIRIPGLTPSRSSSNF*CPFNSI
Trigger: GATGCTGTTGAAGGGGCACAAGAAATTGGAGCTGGA...TCTGCTGGGAGTCAGACCTGGAATTCTGATTCCAAACTCTTTATTACTTTGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257575.9
ENST00000392549.7
ENST00000407967.7
ENST00000547718.5
CDS-3UTR CAA 90 bp ACTTCCCAAAGTAATAAAGAGTTTGGAATCAGAATTCCAGGTCTGACTCCCAGCTCCAGCTCCAATTTCTaGTGCCCCTTCAACAGCATC +
Preference number: 5 (lower is better)
Translates to: TSQSNKEFGIRIPGLTPSSSSNF*CPFNSI
Trigger: GATGCTGTTGAAGGGGCACAAGAAATTGGAGCTGGA...GCTGGGAGTCAGACCTGGAATTCTGATTCCAAACTCTTTATTACTTTGGGAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257575.9
ENST00000392549.7
ENST00000407967.7
ENST00000547718.5
CDS-3UTR CAA 90 bp TCTATTTCCTTACACACCTGCACTTTCATCAATCTTCTCCAGCTCCAATTTCTTCTTCAGAACTCCATGTaGACGACACTGGAGGTAGGC +
Preference number: 5 (lower is better)
Translates to: SISLHTCTFINLLQLQFLLQNSM*TTLEVG
Trigger: GCCTACCTCCAGTGTCGTCAACATGGAGTTCTGAAG...AAGAAATTGGAGCTGGAGAAGATTGATGAAAGTGCAGGTGTGTAAGGAAATAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257575.9
ENST00000392549.7
ENST00000547718.5
CDS-3UTR CAA 90 bp ACTTCCCAAAGTAATAAAGAGTTTGGAATCAGAATTCCAGGTCTGACTCCCAGCAACTTTCCCTTGGACTaGACAGCCAGGATGATCTTG +
Preference number: 5 (lower is better)
Translates to: TSQSNKEFGIRIPGLTPSNFPLD*TARMIL
Trigger: CAAGATCATCCTGGCTGTCAAGTCCAAGGGAAAGTT...GCTGGGAGTCAGACCTGGAATTCTGATTCCAAACTCTTTATTACTTTGGGAAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257575.9
ENST00000392549.7
ENST00000407967.7
ENST00000547718.5
CDS-3UTR CAA 90 bp ACTGTTCTATTTCCTTACACACCTGCACTTTCATCAATCTTCTCCAGCTCCAATTCCTGTTGCTTCCCTTaGGTTTTTCCTCAGGGTAGG +
Preference number: 5 (lower is better)
Translates to: TVLFPYTPALSSIFSSSNSCCFP*VFPQGR
Trigger: CCTACCCTGAGGAAAAACCAAAGGGAAGCAACAGGA...ATTGGAGCTGGAGAAGATTGATGAAAGTGCAGGTGTGTAAGGAAATAGAACAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257575.9
ENST00000392549.7
CDS-3UTR CAA 90 bp CATTCTTCTCTTCCGAAGCTGATGCACCTATCATATCTGTGTCCAAAGCTTGCCTCCGATAAAAACCAGTaGCAGAAGTTCCTGTTGCTT +
Preference number: 5 (lower is better)
Translates to: HSSLPKLMHLSYLCPKLASDKNQ*QKFLLL
Trigger: AAGCAACAGGAACTTCTGCAACTGGTTTTTATCGGA...GGCAAGCTTTGGACACAGATATGATAGGTGCATCAGCTTCGGAAGAGAAGAATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000257575.9
CDS-3UTR CAA 90 bp CCATGGAGCTTAGAGTCTGGTGGGAATGGGATGTTCAGGAGTTATCTGGAAAAAGAACTGTGTAACAATTaGAACAGGGTAAGAAGCCTC +
Preference number: 5 (lower is better)
Translates to: PWSLESGGNGMFRSYLEKELCNN*NRVRSL
Trigger: GAGGCTTCTTACCCTGTTCAAATTGTTACACAGTTC...TTTTTCCAGATAACTCCTGAACATCCCATTCCCACCAGACTCTAAGCTCCATGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000677328.1
CDS-3UTR CAA 90 bp ATATTTTACATGAAGAGGTCCATTTCTAAGGACTTCGTGGAACTTGAGTCAGTGACCAAAGGCAGCTGTTaGTCCTACAGCAGAAGTCCT +
Preference number: 5 (lower is better)
Translates to: IFYMKRSISKDFVELESVTKGSC*SYSRSP
Trigger: AGGACTTCTGCTGTAGGACAAACAGCTGCCTTTGGT...CACTGACTCAAGTTCCACGAAGTCCTTAGAAATGGACCTCTTCATGTAAAATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257575.9
ENST00000407967.7
CDS GCA 72 bp GGGTGTCCACGGCGACCGAGCGGCAGAGCGGGCAGGTaGGCTCACGGTCCAGCCACAGGCAGAGGCACTCCT +
Preference number: 6 (lower is better)
Translates to: GCPRRPSGRAGR*AHGPATGRGTP
Trigger: AGGAGTGCCTCTGCCTGTGGCTGGACCGTGAGCGCACCTGCCCGCTCTGCCGCTCGGTCGCCGTGGACACCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257575.9
ENST00000392549.7
CDS CAA 90 bp GCGCAGCCTGGGCAGCATGTGACTTCCGATGCTTCCGGCCTCCTATaGGGTGGTTTCTTGGCGTCGCCGGGTCCGGCGCTAGGACCCGGG +
Preference number: 6 (lower is better)
Translates to: AQPGQHVTSDASGLL*GGFLASPGPALGPG
Trigger: CCCGGGTCCTAGCGCCGGACCCGGCGACGCCAAGAAACCACCCAATAGGAGGCCGGAAGCATCGGAAGTCACATGCTGCCCAGGCTGCGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615278.1
CDS CCA 72 bp AGCCCCCGCAGGGCTGGGTCCGGGCATGCTGACCCTTaGCGTCCTTCTGGGTGTCCTCAGTGTTCGGTCCTA +
Preference number: 6 (lower is better)
Translates to: SPRRAGSGHADP*RPSGCPQCSVL
Trigger: TAGGACCGAACACTGAGGACACCCAGAAGGACGCCAAGGGTCAGCATGCCCGGACCCAGCCCTGCGGGGGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000257575.9
CDS CAA 72 bp ACTTCCGATGCTTCCGGCCTCCTATTGGGTGGTTTCTaGGCGTCGCCGGGTCCGGCGCTAGGACCCGGGCAC +
Preference number: 6 (lower is better)
Translates to: TSDASGLLLGGF*ASPGPALGPGH
Trigger: GTGCCCGGGTCCTAGCGCCGGACCCGGCGACGCCAAGAAACCACCCAATAGGAGGCCGGAAGCATCGGAAGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615278.1
CDS CAA 90 bp CAGCATGTGACTTCCGATGCTTCCGGCCTCCTATTGGGTGGTTTCTaGGCGTCGCCGGGTCCGGCGCTAGGACCCGGGCACAGCTACGCC +
Preference number: 6 (lower is better)
Translates to: QHVTSDASGLLLGGF*ASPGPALGPGHSYA
Trigger: GGCGTAGCTGTGCCCGGGTCCTAGCGCCGGACCCGGCGACGCCAAGAAACCACCCAATAGGAGGCCGGAAGCATCGGAAGTCACATGCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615278.1
CDS CCA 72 bp GTGTTCGGTCCTAGTACACCTGGAAGTGTGCGGACGTaGCGCCGTCCTTCCAGCAGCGCAGGGTGTCCACGG +
Preference number: 6 (lower is better)
Translates to: VFGPSTPGSVRT*RRPSSSAGCPR
Trigger: CCGTGGACACCCTGCGCTGCTGGAAGGACGGCGCCACGTCCGCACACTTCCAGGTGTACTAGGACCGAACAC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257575.9
ENST00000392549.7
CDS CCA 72 bp GGAGCTCACTGGGTCCCCCAGCAGCCCATTCCTGTCTaGCACCACGGGGATCCAATGGGTAGGAGCAAGGGC +
Preference number: 6 (lower is better)
Translates to: GAHWVPQQPIPV*HHGDPMGRSKG
Trigger: GCCCTTGCTCCTACCCATTGGATCCCCGTGGTGCCAGACAGGAATGGGCTGCTGGGGGACCCAGTGAGCTCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000677328.1
CDS CCA 72 bp GCATGTGACTTCCGATGCTTCCGGCCTCCTATTGGGTaGTTTCTTGGCGTCGCCGGGTCCGGCGCTAGGACC +
Preference number: 6 (lower is better)
Translates to: ACDFRCFRPPIG*FLGVAGSGART
Trigger: GGTCCTAGCGCCGGACCCGGCGACGCCAAGAAACCACCCAATAGGAGGCCGGAAGCATCGGAAGTCACATGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615278.1
CDS CAA 72 bp GGGCAGCATGTGACTTCCGATGCTTCCGGCCTCCTATaGGGTGGTTTCTTGGCGTCGCCGGGTCCGGCGCTA +
Preference number: 6 (lower is better)
Translates to: GQHVTSDASGLL*GGFLASPGPAL
Trigger: TAGCGCCGGACCCGGCGACGCCAAGAAACCACCCAATAGGAGGCCGGAAGCATCGGAAGTCACATGCTGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615278.1
CDS GCA 72 bp TGTCCTCAGTGTTCGGTCCTAGTACACCTGGAAGTGTaGGGACGTGGCGCCGTCCTTCCAGCAGCGCAGGGT +
Preference number: 6 (lower is better)
Translates to: CPQCSVLVHLEV*GRGAVLPAAQG
Trigger: ACCCTGCGCTGCTGGAAGGACGGCGCCACGTCCGCACACTTCCAGGTGTACTAGGACCGAACACTGAGGACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257575.9
ENST00000392549.7
CDS CCA 72 bp CATTCAGGTCCAGCCAAGCCAATCACCCGCGCAGCCTaGGCAGCATGTGACTTCCGATGCTTCCGGCCTCCT +
Preference number: 6 (lower is better)
Translates to: HSGPAKPITRAA*AACDFRCFRPP
Trigger: AGGAGGCCGGAAGCATCGGAAGTCACATGCTGCCCAGGCTGCGCGGGTGATTGGCTTGGCTGGACCTGAATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615278.1
CDS TCA 72 bp AGCCAAGCCAATCACCCGCGCAGCCTGGGCAGCATGTaGCTTCCGATGCTTCCGGCCTCCTATTGGGTGGTT +
Preference number: 6 (lower is better)
Translates to: SQANHPRSLGSM*LPMLPASYWVV
Trigger: AACCACCCAATAGGAGGCCGGAAGCATCGGAAGTCACATGCTGCCCAGGCTGCGCGGGTGATTGGCTTGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615278.1
CDS GCA 72 bp GCTGCGGTTTCTCGGGATCCCAAGGACCGCTGGCTCTaGAGTCTTCAAGTTCAATGGCCCCCAGTTCCCCAG +
Preference number: 6 (lower is better)
Translates to: AAVSRDPKDRWL*SLQVQWPPVPQ
Trigger: CTGGGGAACTGGGGGCCATTGAACTTGAAGACTGCAGAGCCAGCGGTCCTTGGGATCCCGAGAAACCGCAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000547718.5
CDS GCA 72 bp ATCACCCGCGCAGCCTGGGCAGCATGTGACTTCCGATaGTTCCGGCCTCCTATTGGGTGGTTTCTTGGCGTC +
Preference number: 6 (lower is better)
Translates to: ITRAAWAACDFR*FRPPIGWFLGV
Trigger: GACGCCAAGAAACCACCCAATAGGAGGCCGGAAGCATCGGAAGTCACATGCTGCCCAGGCTGCGCGGGTGAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615278.1
CDS GCA 72 bp TGCGCCCCTGGGGCCCGTTACAGGACTGCACCGAAATaGACTCAGAGGAGCATCGCCTGCATCACTTGGACT +
Preference number: 6 (lower is better)
Translates to: CAPGARYRTAPK*TQRSIACITWT
Trigger: AGTCCAAGTGATGCAGGCGATGCTCCTCTGAGTGCATTTCGGTGCAGTCCTGTAACGGGCCCCAGGGGCGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615278.1
CDS CCA 72 bp CGCCTGGCTGCGGTTTCTCGGGATCCCAAGGACCGCTaGCTCTGCAGTCTTCAAGTTCAATGGCCCCCAGTT +
Preference number: 6 (lower is better)
Translates to: RLAAVSRDPKDR*LCSLQVQWPPV
Trigger: AACTGGGGGCCATTGAACTTGAAGACTGCAGAGCCAGCGGTCCTTGGGATCCCGAGAAACCGCAGCCAGGCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000547718.5
CDS CCA 72 bp GAGAGGTCAGAAACGCCTAGCCTCACCCCAACCCGATaGTCCTTCCCTCCTACCCACCCTGGTAGCGGAAGA +
Preference number: 6 (lower is better)
Translates to: ERSETPSLTPTR*SFPPTHPGSGR
Trigger: TCTTCCGCTACCAGGGTGGGTAGGAGGGAAGGACCATCGGGTTGGGGTGAGGCTAGGCGTTTCTGACCTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677328.1
CDS CAA 90 bp CAGGACTGCACCGAAATGCACTCAGAGGAGCATCGCCTGCATCACTaGGACTGGAAGCCGGCAGGTGCACTTCGGGAACAACGTCGCGAG +
Preference number: 6 (lower is better)
Translates to: QDCTEMHSEEHRLHH*DWKPAGALREQRRE
Trigger: CTCGCGACGTTGTTCCCGAAGTGCACCTGCCGGCTTCCAGTCCAAGTGATGCAGGCGATGCTCCTCTGAGTGCATTTCGGTGCAGTCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615278.1
CDS GCA 72 bp GCATCGCCTGCATCACTTGGACTGGAAGCCGGCAGGTaGACTTCGGGAACAACGTCGCGAGCGCTTTTCATC +
Preference number: 6 (lower is better)
Translates to: ASPASLGLEAGR*TSGTTSRALFI
Trigger: GATGAAAAGCGCTCGCGACGTTGTTCCCGAAGTGCACCTGCCGGCTTCCAGTCCAAGTGATGCAGGCGATGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615278.1
CDS GCA 72 bp TGGTTCAAGTTGCGCCCCTGGGGCCCGTTACAGGACTaGACCGAAATGCACTCAGAGGAGCATCGCCTGCAT +
Preference number: 6 (lower is better)
Translates to: WFKLRPWGPLQD*TEMHSEEHRLH
Trigger: ATGCAGGCGATGCTCCTCTGAGTGCATTTCGGTGCAGTCCTGTAACGGGCCCCAGGGGCGCAACTTGAACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615278.1
CDS CCA 72 bp GTAGGCATTCGGGAATCCTCAGGGGGATGTGACCAATaGATCCCAGAGAGGACAGGCCTCCCCCTCCTCTTC +
Preference number: 6 (lower is better)
Translates to: VGIRESSGGCDQ*IPERTGLPLLF
Trigger: GAAGAGGAGGGGGAGGCCTGTCCTCTCTGGGATCCATTGGTCACATCCCCCTGAGGATTCCCGAATGCCTAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000257575.9
ENST00000392549.7
ENST00000407967.7
ENST00000547718.5
ENST00000552920.1
CDS CAA 72 bp GACTCCACAGCGGCGGCACGAACTAAACCCTCTTCTTaGGCAGCTGGGAGGCGGATAGTCTGGGGCAGGTTT +
Preference number: 6 (lower is better)
Translates to: DSTAAARTKPSS*AAGRRIVWGRF
Trigger: AAACCTGCCCCAGACTATCCGCCTCCCAGCTGCCAAAGAAGAGGGTTTAGTTCGTGCCGCCGCTGTGGAGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677328.1
CDS TCA 72 bp CAAAGACGCCACCTTCATCCACACTCGCCTCGGAGCTaGGCGCCTGGCTGCGGTTTCTTTCAGGTGGAATGT +
Preference number: 6 (lower is better)
Translates to: QRRHLHPHSPRS*APGCGFFQVEC
Trigger: ACATTCCACCTGAAAGAAACCGCAGCCAGGCGCTCAGCTCCGAGGCGAGTGTGGATGAAGGTGGCGTCTTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257575.9
ENST00000392549.7
ENST00000407967.7
CDS GCA 72 bp AGGACTGCACCGAAATGCACTCAGAGGAGCATCGCCTaGATCACTTGGACTGGAAGCCGGCAGGTGCACTTC +
Preference number: 6 (lower is better)
Translates to: RTAPKCTQRSIA*ITWTGSRQVHF
Trigger: GAAGTGCACCTGCCGGCTTCCAGTCCAAGTGATGCAGGCGATGCTCCTCTGAGTGCATTTCGGTGCAGTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615278.1
CDS CCA 72 bp CCACCTTCATCCACACTCGCCTCGGAGCTGAGCGCCTaGCTGCGGTTTCTTTCAGGTGGAATGTTATCCGTG +
Preference number: 6 (lower is better)
Translates to: PPSSTLASELSA*LRFLSGGMLSV
Trigger: CACGGATAACATTCCACCTGAAAGAAACCGCAGCCAGGCGCTCAGCTCCGAGGCGAGTGTGGATGAAGGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257575.9
ENST00000392549.7
ENST00000407967.7
CDS CCA 72 bp CCGAAATGCACTCAGAGGAGCATCGCCTGCATCACTTaGACTGGAAGCCGGCAGGTGCACTTCGGGAACAAC +
Preference number: 6 (lower is better)
Translates to: PKCTQRSIACIT*TGSRQVHFGNN
Trigger: GTTGTTCCCGAAGTGCACCTGCCGGCTTCCAGTCCAAGTGATGCAGGCGATGCTCCTCTGAGTGCATTTCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615278.1
CDS CAA 72 bp GAGCCAGGGATGCCAAGCCAAGGGGAAAGTCCTGGTTaGGTGGCACACAGGGGCAAATGTCCTGAATCTGGC +
Preference number: 6 (lower is better)
Translates to: EPGMPSQGESPG*VAHRGKCPESG
Trigger: GCCAGATTCAGGACATTTGCCCCTGTGTGCCACCAAACCAGGACTTTCCCCTTGGCTTGGCATCCCTGGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000551251.1
CDS CCA 72 bp CAGGGATGCCAAGCCAAGGGGAAAGTCCTGGTTTGGTaGCACACAGGGGCAAATGTCCTGAATCTGGCACAG +
Preference number: 6 (lower is better)
Translates to: QGCQAKGKVLVW*HTGANVLNLAQ
Trigger: CTGTGCCAGATTCAGGACATTTGCCCCTGTGTGCCACCAAACCAGGACTTTCCCCTTGGCTTGGCATCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000551251.1
CDS CCA 72 bp AGCCAGGGATGCCAAGCCAAGGGGAAAGTCCTGGTTTaGTGGCACACAGGGGCAAATGTCCTGAATCTGGCA +
Preference number: 6 (lower is better)
Translates to: SQGCQAKGKVLV*WHTGANVLNLA
Trigger: TGCCAGATTCAGGACATTTGCCCCTGTGTGCCACCAAACCAGGACTTTCCCCTTGGCTTGGCATCCCTGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000551251.1
CDS CCA 72 bp AAACCCTCTTCTTTGGCAGCTGGGAGGCGGATAGTCTaGGGCAGGTTTTCAAGCCCCTATCGCTCTCCACCT +
Preference number: 6 (lower is better)
Translates to: KPSSLAAGRRIV*GRFSSPYRSPP
Trigger: AGGTGGAGAGCGATAGGGGCTTGAAAACCTGCCCCAGACTATCCGCCTCCCAGCTGCCAAAGAAGAGGGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677328.1
CDS CAA 72 bp ACCGAAATGCACTCAGAGGAGCATCGCCTGCATCACTaGGACTGGAAGCCGGCAGGTGCACTTCGGGAACAA +
Preference number: 6 (lower is better)
Translates to: TEMHSEEHRLHH*DWKPAGALREQ
Trigger: TTGTTCCCGAAGTGCACCTGCCGGCTTCCAGTCCAAGTGATGCAGGCGATGCTCCTCTGAGTGCATTTCGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615278.1
CDS CCA 72 bp CACAGGGGCAAATGTCCTGAATCCTTGGCGTCCTTCTaGGTGTCCTCAGTGTTCGGTCCTAGTACACCTGGA +
Preference number: 6 (lower is better)
Translates to: HRGKCPESLASF*VSSVFGPSTPG
Trigger: TCCAGGTGTACTAGGACCGAACACTGAGGACACCCAGAAGGACGCCAAGGATTCAGGACATTTGCCCCTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392549.7
CDS CCA 72 bp AAACTGTGCAGCCAAGAGGTGCTGGATGAAGTGAAGTaGGCAGCGGACTGGCAGGAGACATGGATTCTGGGT +
Preference number: 6 (lower is better)
Translates to: KLCSQEVLDEVK*AADWQETWILG
Trigger: ACCCAGAATCCATGTCTCCTGCCAGTCCGCTGCCCACTTCACTTCATCCAGCACCTCTTGGCTGCACAGTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552920.1
CDS CCA 72 bp ACTTTTCGATGCTTGCGATGGTTCAAGTTGCGCCCCTaGGGCCCGTTACAGGACTGCACCGAAATGCACTCA +
Preference number: 6 (lower is better)
Translates to: TFRCLRWFKLRP*GPLQDCTEMHS
Trigger: TGAGTGCATTTCGGTGCAGTCCTGTAACGGGCCCCAGGGGCGCAACTTGAACCATCGCAAGCATCGAAAAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615278.1
CDS CAA 90 bp CTCTGGGGTGTCCAATATATCTTGGACTTGACAGCCAGGATGATCTaGGGCAGGGCCACGATGAGGCACTTGAGGGCGATGGTGATGTAC +
Preference number: 6 (lower is better)
Translates to: LWGVQYILDLTARMI*GRATMRHLRAMVMY
Trigger: GTACATCACCATCGCCCTCAAGTGCCTCATCGTGGCCCTGCCCAAGATCATCCTGGCTGTCAAGTCCAAGATATATTGGACACCCCAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677328.1
CDS CAA 72 bp GTCCAATATATCTTGGACTTGACAGCCAGGATGATCTaGGGCAGGGCCACGATGAGGCACTTGAGGGCGATG +
Preference number: 6 (lower is better)
Translates to: VQYILDLTARMI*GRATMRHLRAM
Trigger: CATCGCCCTCAAGTGCCTCATCGTGGCCCTGCCCAAGATCATCCTGGCTGTCAAGTCCAAGATATATTGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677328.1
CDS CAA 72 bp ACCTCTTCTCCCTCACGGGGGAAGCTGAAGGTCTGTTaGCAGGAGAAGTTTCCAACTTTATCTGGCGCTGAG +
Preference number: 6 (lower is better)
Translates to: TSSPSRGKLKVC*QEKFPTLSGAE
Trigger: CTCAGCGCCAGATAAAGTTGGAAACTTCTCCTGCAAACAGACCTTCAGCTTCCCCCGTGAGGGAGAAGAGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000677328.1
CDS CAA 90 bp CCAGCACTGACCTCTTCTCCCTCACGGGGGAAGCTGAAGGTCTGTTaGCAGGAGAAGTTTCCAACTTTATCTGGCGCTGAGTCAATTTGG +
Preference number: 6 (lower is better)
Translates to: PALTSSPSRGKLKVC*QEKFPTLSGAESIW
Trigger: CCAAATTGACTCAGCGCCAGATAAAGTTGGAAACTTCTCCTGCAAACAGACCTTCAGCTTCCCCCGTGAGGGAGAAGAGGTCAGTGCTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000677328.1
CDS GCA 72 bp GGCTGCGGTTTCTTTCAGGTGGAATGTTATCCGTGTTaGTGCTGTGGCGTCTCTGCATCTTCCTTAACACCT +
Preference number: 6 (lower is better)
Translates to: GCGFFQVECYPC*CCGVSASSLTP
Trigger: AGGTGTTAAGGAAGATGCAGAGACGCCACAGCAGCAACACGGATAACATTCCACCTGAAAGAAACCGCAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257575.9
ENST00000392549.7
ENST00000407967.7
CDS CAA 72 bp TGGCTGCGGTTTCTTTCAGGTGGAATGTTATCCGTGTaGCTGCTGTGGCGTCTCTGCATCTTCCTTAACACC +
Preference number: 6 (lower is better)
Translates to: WLRFLSGGMLSV*LLWRLCIFLNT
Trigger: GGTGTTAAGGAAGATGCAGAGACGCCACAGCAGCAACACGGATAACATTCCACCTGAAAGAAACCGCAGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257575.9
ENST00000392549.7
ENST00000407967.7
CDS CAA 72 bp CCTTGGTCACAGCTTTCAGGTGGAATGTTATCCGTGTaGCTGCTGTGGCGTCTCTGCATCTTCCTTAACACC +
Preference number: 6 (lower is better)
Translates to: PWSQLSGGMLSV*LLWRLCIFLNT
Trigger: GGTGTTAAGGAAGATGCAGAGACGCCACAGCAGCAACACGGATAACATTCCACCTGAAAGCTGTGACCAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547718.5
CDS GCA 72 bp GGAGACATGGATTCTGGGTTGATGCTGCTGCTAACTTaGTGTGACCCTAGACAAATCAGTAACCCCTCTGTG +
Preference number: 6 (lower is better)
Translates to: GDMDSGLMLLLT*CDPRQISNPSV
Trigger: CACAGAGGGGTTACTGATTTGTCTAGGGTCACAGCAAGTTAGCAGCAGCATCAACCCAGAATCCATGTCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552920.1
CDS GCA 72 bp CTTGGTCACAGCTTTCAGGTGGAATGTTATCCGTGTTaGTGCTGTGGCGTCTCTGCATCTTCCTTAACACCT +
Preference number: 6 (lower is better)
Translates to: LGHSFQVECYPC*CCGVSASSLTP
Trigger: AGGTGTTAAGGAAGATGCAGAGACGCCACAGCAGCAACACGGATAACATTCCACCTGAAAGCTGTGACCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547718.5
CDS TCA 72 bp TTAATCCTCTGCTCTGTACATCCCACTATGTCCCTTTaGAGGACCGCACCGAGACTTTTCGATGCTTGCGAT +
Preference number: 6 (lower is better)
Translates to: LILCSVHPTMSL*RTAPRLFDACD
Trigger: ATCGCAAGCATCGAAAAGTCTCGGTGCGGTCCTTCAAAGGGACATAGTGGGATGTACAGAGCAGAGGATTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615278.1
CDS CAA 72 bp TTTAATCCTCTGCTCTGTACATCCCACTATGTCCCTTaGAAGGACCGCACCGAGACTTTTCGATGCTTGCGA +
Preference number: 6 (lower is better)
Translates to: FNPLLCTSHYVP*KDRTETFRCLR
Trigger: TCGCAAGCATCGAAAAGTCTCGGTGCGGTCCTTCAAAGGGACATAGTGGGATGTACAGAGCAGAGGATTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615278.1
CDS CAA 90 bp GAAACGCTTTTTAATCCTCTGCTCTGTACATCCCACTATGTCCCTTaGAAGGACCGCACCGAGACTTTTCGATGCTTGCGATGGTTCAAG +
Preference number: 6 (lower is better)
Translates to: ETLFNPLLCTSHYVP*KDRTETFRCLRWFK
Trigger: CTTGAACCATCGCAAGCATCGAAAAGTCTCGGTGCGGTCCTTCAAAGGGACATAGTGGGATGTACAGAGCAGAGGATTAAAAAGCGTTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000615278.1
CDS TCA 72 bp CTGTTTGCAGGAGAAGTTTCCAACTTTATCTGGCGCTaGGTCAATTTGGAAAGCCAAGCAAAATACAGGCGT +
Preference number: 6 (lower is better)
Translates to: LFAGEVSNFIWR*VNLESQAKYRR
Trigger: ACGCCTGTATTTTGCTTGGCTTTCCAAATTGACTCAGCGCCAGATAAAGTTGGAAACTTCTCCTGCAAACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677328.1
CDS CCA 72 bp GAGAAGTTTCCAACTTTATCTGGCGCTGAGTCAATTTaGAAAGCCAAGCAAAATACAGGCGTAGAGGAAGCA +
Preference number: 6 (lower is better)
Translates to: EKFPTLSGAESI*KAKQNTGVEEA
Trigger: TGCTTCCTCTACGCCTGTATTTTGCTTGGCTTTCCAAATTGACTCAGCGCCAGATAAAGTTGGAAACTTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677328.1
CDS CAA 90 bp CCAGCTCTCACATTTAATCAAGTAGTAATAAAGATGCAAATTCTCTaGGAGACGTGTCACCTGATTCACTGTGAAGAGCCACATGGACTT +
Preference number: 6 (lower is better)
Translates to: PALTFNQVVIKMQIL*ETCHLIHCEEPHGL
Trigger: AAGTCCATGTGGCTCTTCACAGTGAATCAGGTGACACGTCTCCAAGAGAATTTGCATCTTTATTACTACTTGATTAAATGTGAGAGCTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552920.1