RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RNF44 (Homo sapiens)

Ensembl gene IDs: ENSG00000146083

Ensembl transcript IDs: ENST00000274811.9, ENST00000504160.1, ENST00000504434.1, ENST00000506378.1, ENST00000508478.1, ENST00000509404.1, ENST00000513029.5, ENST00000515051.1

Found 483 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AGGGTTCTCCCGGGCAGGCGGCTGCGTGGCCTCACTCAGCCTCCCTaGGCACCTCGGAGGCGTCGGCCCGGCAGATGGGACACGTCCGGT +
Preference number: 1 (lower is better)
Translates to: RVLPGRRLRGLTQPP*APRRRRPGRWDTSG
Trigger: ACCGGACGTGTCCCATCTGCCGGGCCGACGCCTCCGAGGTGCCCAGGGAGGCTGAGTGAGGCCACGCAGCCGCCTGCCCGGGAGAACCCT
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506378.1
ENST00000513029.5
3UTR TCA 90 bp CGCCCAGCCCAGCCCGGCACACGCATGCATGCAGGCCGGCCAGCATaGCCGTGCTCGGCCCCCTGGGCACTCGGTCCCAGTTGGTCCCTA +
Preference number: 1 (lower is better)
Translates to: RPAQPGTRMHAGRPA*PCSAPWALGPSWSL
Trigger: TAGGGACCAACTGGGACCGAGTGCCCAGGGGGCCGAGCACGGTCATGCTGGCCGGCCTGCATGCATGCGTGTGCCGGGCTGGGCTGGGCG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000274811.9
3UTR CCA 90 bp AGTTTCCAGAGCTTCAGGCAGGGTTCTCCCGGGCAGGCGGCTGCGTaGCCTCACTCAGCCTCCCTGGGCACCTCGGAGGCGTCGGCCCGG +
Preference number: 1 (lower is better)
Translates to: SFQSFRQGSPGQAAA*PHSASLGTSEASAR
Trigger: CCGGGCCGACGCCTCCGAGGTGCCCAGGGAGGCTGAGTGAGGCCACGCAGCCGCCTGCCCGGGAGAACCCTGCCTGAAGCTCTGGAAACT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506378.1
ENST00000513029.5
3UTR TCA 90 bp GAGCCAGGGCCACTGCGAGGAGAACGAGGGTGGTTGGAGCATCCCTaGGGCAGCAGGCGCCAGGGGCTGCCTGCTAGGATGTGCCGGCCC +
Preference number: 1 (lower is better)
Translates to: EPGPLRGERGWLEHP*GSRRQGLPARMCRP
Trigger: GGGCCGGCACATCCTAGCAGGCAGCCCCTGGCGCCTGCTGCCTCAGGGATGCTCCAACCACCCTCGTTCTCCTCGCAGTGGCCCTGGCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274811.9
3UTR GCA 90 bp TGCTCGTGGAGATCAACCATGAACGGGCTCTGCTGGGTGGCTGGGTaGAGCATTCGGGGGCTCCCGCCGGCAGGAGCCGAGGCTCGGCGC +
Preference number: 1 (lower is better)
Translates to: CSWRSTMNGLCWVAG*SIRGLPPAGAEARR
Trigger: GCGCCGAGCCTCGGCTCCTGCCGGCGGGAGCCCCCGAATGCTGCACCCAGCCACCCAGCAGAGCCCGTTCATGGTTGATCTCCACGAGCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000504160.1
ENST00000513029.5
3UTR GCA 90 bp CACAAGTTTCCAGAGCTTCAGGCAGGGTTCTCCCGGGCAGGCGGCTaGGTGGCCTCACTCAGCCTCCCTGGGCACCTCGGAGGCGTCGGC +
Preference number: 1 (lower is better)
Translates to: HKFPELQAGFSRAGG*VASLSLPGHLGGVG
Trigger: GCCGACGCCTCCGAGGTGCCCAGGGAGGCTGAGTGAGGCCACGCAGCCGCCTGCCCGGGAGAACCCTGCCTGAAGCTCTGGAAACTTGTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506378.1
ENST00000513029.5
3UTR CCA 90 bp CACCTGCTCGTGGAGATCAACCATGAACGGGCTCTGCTGGGTGGCTaGGTGCAGCATTCGGGGGCTCCCGCCGGCAGGAGCCGAGGCTCG +
Preference number: 1 (lower is better)
Translates to: HLLVEINHERALLGG*VQHSGAPAGRSRGS
Trigger: CGAGCCTCGGCTCCTGCCGGCGGGAGCCCCCGAATGCTGCACCCAGCCACCCAGCAGAGCCCGTTCATGGTTGATCTCCACGAGCAGGTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000504160.1
ENST00000513029.5
3UTR CCA 90 bp CCCTGGTGCACCTGCTCGTGGAGATCAACCATGAACGGGCTCTGCTaGGTGGCTGGGTGCAGCATTCGGGGGCTCCCGCCGGCAGGAGCC +
Preference number: 1 (lower is better)
Translates to: PWCTCSWRSTMNGLC*VAGCSIRGLPPAGA
Trigger: GGCTCCTGCCGGCGGGAGCCCCCGAATGCTGCACCCAGCCACCCAGCAGAGCCCGTTCATGGTTGATCTCCACGAGCAGGTGCACCAGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000504160.1
ENST00000513029.5
3UTR GCA 90 bp CAGGGCTCCCTCTCCCCGTATGGCCCAAGCCCCTCAGGATACGTGTaGCCCAGCTCGGGATTAGGCTGGGACGCCCTCCAGCCTGAGGGT +
Preference number: 1 (lower is better)
Translates to: QGSLSPYGPSPSGYV*PSSGLGWDALQPEG
Trigger: ACCCTCAGGCTGGAGGGCGTCCCAGCCTAATCCCGAGCTGGGGCACACGTATCCTGAGGGGCTTGGGCCATACGGGGAGAGGGAGCCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274811.9
3UTR GCA 90 bp AGTACAGTGCATGGCAGTTATCAGCTGAGCACAGACCCCCAACCCTaGCCCACGACCGCCGGCCGCCCAGCCCAGCCCGGCACACGCATG +
Preference number: 1 (lower is better)
Translates to: STVHGSYQLSTDPQP*PTTAGRPAQPGTRM
Trigger: CATGCGTGTGCCGGGCTGGGCTGGGCGGCCGGCGGTCGTGGGGCAGGGTTGGGGGTCTGTGCTCAGCTGATAACTGCCATGCACTGTACT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000274811.9
3UTR GCA 90 bp GGTCCCTGGTGCACCTGCTCGTGGAGATCAACCATGAACGGGCTCTaGTGGGTGGCTGGGTGCAGCATTCGGGGGCTCCCGCCGGCAGGA +
Preference number: 1 (lower is better)
Translates to: GPWCTCSWRSTMNGL*WVAGCSIRGLPPAG
Trigger: TCCTGCCGGCGGGAGCCCCCGAATGCTGCACCCAGCCACCCAGCAGAGCCCGTTCATGGTTGATCTCCACGAGCAGGTGCACCAGGGACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000504160.1
ENST00000513029.5
3UTR GCA 90 bp AACGAGGGTGGTTGGAGCATCCCTGAGGCAGCAGGCGCCAGGGGCTaGCTGCTAGGATGTGCCGGCCCCACACGCAGTTCGTTCAGGGCA +
Preference number: 1 (lower is better)
Translates to: NEGGWSIPEAAGARG*LLGCAGPTRSSFRA
Trigger: TGCCCTGAACGAACTGCGTGTGGGGCCGGCACATCCTAGCAGGCAGCCCCTGGCGCCTGCTGCCTCAGGGATGCTCCAACCACCCTCGTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274811.9
3UTR CCA 90 bp ACCCTACAGCGGCCTCCTCCAGAACTTGGAGGACAGGGATCAGGCTaGGAAGGCCCCCTGGAGATGGGGGTCCACAGCCTTCCTGGTCCC +
Preference number: 1 (lower is better)
Translates to: TLQRPPPELGGQGSG*EGPLEMGVHSLPGP
Trigger: GGGACCAGGAAGGCTGTGGACCCCCATCTCCAGGGGGCCTTCCCAGCCTGATCCCTGTCCTCCAAGTTCTGGAGGAGGCCGCTGTAGGGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000274811.9
3UTR CCA 90 bp GGCGGGCGGGCAGGCAGGCAGACTAGGGAGGGAGTCTTTGGAGCTTaGCAAATGCAGGGGCTTATTGCAGGGACTCCTCGCTGGGCTGAC +
Preference number: 1 (lower is better)
Translates to: GGRAGRQTREGVFGA*QMQGLIAGTPRWAD
Trigger: GTCAGCCCAGCGAGGAGTCCCTGCAATAAGCCCCTGCATTTGCCAAGCTCCAAAGACTCCCTCCCTAGTCTGCCTGCCTGCCCGCCCGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274811.9
3UTR CCA 90 bp AGCATGAGACCTTCTGACCCAGGATGGTGCTCTGTCTGCCCATCCTaGGGCCAAGGATCTCCACCGGCCCCACTGAGGGAGCGGACCCCT +
Preference number: 1 (lower is better)
Translates to: SMRPSDPGWCSVCPS*GQGSPPAPLRERTP
Trigger: AGGGGTCCGCTCCCTCAGTGGGGCCGGTGGAGATCCTTGGCCCCAGGATGGGCAGACAGAGCACCATCCTGGGTCAGAAGGTCTCATGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274811.9
3UTR CCA 90 bp GCTGGGACGCCCTCCAGCCTGAGGGTGGGGCTGGAATGTTGTTCCTaGGATGAGGGTCCCCTAGGGAACCAGACTCAGCCCTCACAGCAG +
Preference number: 1 (lower is better)
Translates to: AGTPSSLRVGLECCS*DEGPLGNQTQPSQQ
Trigger: CTGCTGTGAGGGCTGAGTCTGGTTCCCTAGGGGACCCTCATCCCAGGAACAACATTCCAGCCCCACCCTCAGGCTGGAGGGCGTCCCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274811.9
3UTR GCA 90 bp ATGGCTGTCCGGGTTAAAGCGGTACGACGGGAGCTGCTCTATGTCTaGTTTGGTGAGACCCCGGGGCTTGGCATCTCCCAGCCGCTCGGC +
Preference number: 1 (lower is better)
Translates to: MAVRVKAVRRELLYV*FGETPGLGISQPLG
Trigger: GCCGAGCGGCTGGGAGATGCCAAGCCCCGGGGTCTCACCAAAGCAGACATAGAGCAGCTCCCGTCGTACCGCTTTAACCCGGACAGCCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513029.5
3UTR CCA 90 bp TCCTTGGAGGAGATTCGCCCAGGCAGGTGGGAGTTGGGCCCTGGCTaGAGGGAGAAATGCCCTGAAAAGCGTCGGGTCCCGGTAGGCTCT +
Preference number: 1 (lower is better)
Translates to: SLEEIRPGRWELGPG*REKCPEKRRVPVGS
Trigger: AGAGCCTACCGGGACCCGACGCTTTTCAGGGCATTTCTCCCTCCAGCCAGGGCCCAACTCCCACCTGCCTGGGCGAATCTCCTCCAAGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274811.9
3UTR TCA 90 bp AGCTTGGCAAATGCAGGGGCTTATTGCAGGGACTCCTCGCTGGGCTaGCCCTGGCACCAGCTCTGGAAATGCAGGCAGGAGCGAAGGGGC +
Preference number: 1 (lower is better)
Translates to: SLANAGAYCRDSSLG*PWHQLWKCRQERRG
Trigger: GCCCCTTCGCTCCTGCCTGCATTTCCAGAGCTGGTGCCAGGGTCAGCCCAGCGAGGAGTCCCTGCAATAAGCCCCTGCATTTGCCAAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274811.9
3UTR GCA 90 bp GGGCAGGCAGGCAGACTAGGGAGGGAGTCTTTGGAGCTTGGCAAATaGAGGGGCTTATTGCAGGGACTCCTCGCTGGGCTGACCCTGGCA +
Preference number: 1 (lower is better)
Translates to: GQAGRLGRESLELGK*RGLLQGLLAGLTLA
Trigger: TGCCAGGGTCAGCCCAGCGAGGAGTCCCTGCAATAAGCCCCTGCATTTGCCAAGCTCCAAAGACTCCCTCCCTAGTCTGCCTGCCTGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274811.9
3UTR GCA 90 bp GAGGGCACGCCATTTCAGAGCATGAGACCTTCTGACCCAGGATGGTaGTCTGTCTGCCCATCCTGGGGCCAAGGATCTCCACCGGCCCCA +
Preference number: 1 (lower is better)
Translates to: EGTPFQSMRPSDPGW*SVCPSWGQGSPPAP
Trigger: TGGGGCCGGTGGAGATCCTTGGCCCCAGGATGGGCAGACAGAGCACCATCCTGGGTCAGAAGGTCTCATGCTCTGAAATGGCGTGCCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274811.9
3UTR CCA 90 bp GCAGAGGGCACGCCATTTCAGAGCATGAGACCTTCTGACCCAGGATaGTGCTCTGTCTGCCCATCCTGGGGCCAAGGATCTCCACCGGCC +
Preference number: 1 (lower is better)
Translates to: AEGTPFQSMRPSDPG*CSVCPSWGQGSPPA
Trigger: GGCCGGTGGAGATCCTTGGCCCCAGGATGGGCAGACAGAGCACCATCCTGGGTCAGAAGGTCTCATGCTCTGAAATGGCGTGCCCTCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274811.9
3UTR CCA 90 bp AACAACAGAGGGAGAGGAGATTGGGCACGGGTCTGGCTGCATCCCTaGGAGGGACAACCACCGGGAACACAGGGCTCCCTCTCCCCGTAT +
Preference number: 1 (lower is better)
Translates to: NNRGRGDWARVWLHP*EGQPPGTQGSLSPY
Trigger: ATACGGGGAGAGGGAGCCCTGTGTTCCCGGTGGTTGTCCCTCCCAGGGATGCAGCCAGACCCGTGCCCAATCTCCTCTCCCTCTGTTGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274811.9
3UTR TCA 90 bp TGCCACCTGGGCAGAGGGCACGCCATTTCAGAGCATGAGACCTTCTaGCCCAGGATGGTGCTCTGTCTGCCCATCCTGGGGCCAAGGATC +
Preference number: 1 (lower is better)
Translates to: CHLGRGHAISEHETF*PRMVLCLPILGPRI
Trigger: GATCCTTGGCCCCAGGATGGGCAGACAGAGCACCATCCTGGGTCAGAAGGTCTCATGCTCTGAAATGGCGTGCCCTCTGCCCAGGTGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274811.9
3UTR GCA 90 bp CCATTTCAGAGCATGAGACCTTCTGACCCAGGATGGTGCTCTGTCTaGCCATCCTGGGGCCAAGGATCTCCACCGGCCCCACTGAGGGAG +
Preference number: 1 (lower is better)
Translates to: PFQSMRPSDPGWCSV*PSWGQGSPPAPLRE
Trigger: CTCCCTCAGTGGGGCCGGTGGAGATCCTTGGCCCCAGGATGGGCAGACAGAGCACCATCCTGGGTCAGAAGGTCTCATGCTCTGAAATGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274811.9
3UTR GCA 90 bp GCTCAGGAAATGGCTCGTGACACCGTCTGTCTACGCACCTGGCAGTaGCACCTGGGCAGAGGGCACGCCATTTCAGAGCATGAGACCTTC +
Preference number: 1 (lower is better)
Translates to: AQEMARDTVCLRTWQ*HLGRGHAISEHETF
Trigger: GAAGGTCTCATGCTCTGAAATGGCGTGCCCTCTGCCCAGGTGGCACTGCCAGGTGCGTAGACAGACGGTGTCACGAGCCATTTCCTGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274811.9
3UTR GCA 90 bp TCATGCAAAACAACAGAGGGAGAGGAGATTGGGCACGGGTCTGGCTaGATCCCTGGGAGGGACAACCACCGGGAACACAGGGCTCCCTCT +
Preference number: 1 (lower is better)
Translates to: SCKTTEGEEIGHGSG*IPGRDNHREHRAPS
Trigger: AGAGGGAGCCCTGTGTTCCCGGTGGTTGTCCCTCCCAGGGATGCAGCCAGACCCGTGCCCAATCTCCTCTCCCTCTGTTGTTTTGCATGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274811.9
3UTR CCA 90 bp ACGTTCATGCAAAACAACAGAGGGAGAGGAGATTGGGCACGGGTCTaGCTGCATCCCTGGGAGGGACAACCACCGGGAACACAGGGCTCC +
Preference number: 1 (lower is better)
Translates to: TFMQNNRGRGDWARV*LHPWEGQPPGTQGS
Trigger: GGAGCCCTGTGTTCCCGGTGGTTGTCCCTCCCAGGGATGCAGCCAGACCCGTGCCCAATCTCCTCTCCCTCTGTTGTTTTGCATGAACGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274811.9
3UTR CCA 90 bp CTGCTGCTCCTCACGTTCATGCAAAACAACAGAGGGAGAGGAGATTaGGCACGGGTCTGGCTGCATCCCTGGGAGGGACAACCACCGGGA +
Preference number: 1 (lower is better)
Translates to: LLLLTFMQNNRGRGD*ARVWLHPWEGQPPG
Trigger: TCCCGGTGGTTGTCCCTCCCAGGGATGCAGCCAGACCCGTGCCCAATCTCCTCTCCCTCTGTTGTTTTGCATGAACGTGAGGAGCAGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274811.9
3UTR CCA 90 bp TTTGGAGCTTGGCAAATGCAGGGGCTTATTGCAGGGACTCCTCGCTaGGCTGACCCTGGCACCAGCTCTGGAAATGCAGGCAGGAGCGAA +
Preference number: 1 (lower is better)
Translates to: FGAWQMQGLIAGTPR*ADPGTSSGNAGRSE
Trigger: TTCGCTCCTGCCTGCATTTCCAGAGCTGGTGCCAGGGTCAGCCCAGCGAGGAGTCCCTGCAATAAGCCCCTGCATTTGCCAAGCTCCAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274811.9
3UTR CCA 90 bp AAATGGCTCGTGACACCGTCTGTCTACGCACCTGGCAGTGCCACCTaGGCAGAGGGCACGCCATTTCAGAGCATGAGACCTTCTGACCCA +
Preference number: 1 (lower is better)
Translates to: KWLVTPSVYAPGSAT*AEGTPFQSMRPSDP
Trigger: TGGGTCAGAAGGTCTCATGCTCTGAAATGGCGTGCCCTCTGCCCAGGTGGCACTGCCAGGTGCGTAGACAGACGGTGTCACGAGCCATTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274811.9
3UTR CCA 90 bp GGGCAGTGGCTGCTGCAGGCGGTATCTCTGGGTGCTCAGTCTCCGTaGCATCATGTGAGAATATGGCACACCAAAGGACAGCTCCTGGTG +
Preference number: 1 (lower is better)
Translates to: GQWLLQAVSLGAQSP*HHVRIWHTKGQLLV
Trigger: CACCAGGAGCTGTCCTTTGGTGTGCCATATTCTCACATGATGCCACGGAGACTGAGCACCCAGAGATACCGCCTGCAGCAGCCACTGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513029.5
3UTR CCA 90 bp CAGCTGGGTATAGGACAAGAAAGGATTGGGACCAGGGAAAGTGGGTaGGAAGCTCAGCCAGACCCTACAGCGGCCTCCTCCAGAACTTGG +
Preference number: 1 (lower is better)
Translates to: QLGIGQERIGTRESG*EAQPDPTAASSRTW
Trigger: CCAAGTTCTGGAGGAGGCCGCTGTAGGGTCTGGCTGAGCTTCCCACCCACTTTCCCTGGTCCCAATCCTTTCTTGTCCTATACCCAGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274811.9
3UTR CCA 90 bp TCGTTCAGGGCAGCAACCCCAGCTGGGTATAGGACAAGAAAGGATTaGGACCAGGGAAAGTGGGTGGGAAGCTCAGCCAGACCCTACAGC +
Preference number: 1 (lower is better)
Translates to: SFRAATPAGYRTRKD*DQGKWVGSSARPYS
Trigger: GCTGTAGGGTCTGGCTGAGCTTCCCACCCACTTTCCCTGGTCCCAATCCTTTCTTGTCCTATACCCAGCTGGGGTTGCTGCCCTGAACGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274811.9
3UTR GCA 90 bp AAATGCCCTGAAAAGCGTCGGGTCCCGGTAGGCTCTAGGGACGTGTaGAGTACAGTGCATGGCAGTTATCAGCTGAGCACAGACCCCCAA +
Preference number: 1 (lower is better)
Translates to: KCPEKRRVPVGSRDV*STVHGSYQLSTDPQ
Trigger: TTGGGGGTCTGTGCTCAGCTGATAACTGCCATGCACTGTACTGCACACGTCCCTAGAGCCTACCGGGACCCGACGCTTTTCAGGGCATTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000274811.9
3UTR TCA 90 bp CCTCATAGTTCTCCATCTCCACATCATCCACGTCCAGGTCCAGGCTaGTGGTGGGCCCCATTGCTGTTGGTGACATTGGCAGCATCGAGA +
Preference number: 1 (lower is better)
Translates to: PHSSPSPHHPRPGPG*WWAPLLLVTLAASR
Trigger: TCTCGATGCTGCCAATGTCACCAACAGCAATGGGGCCCACCATCAGCCTGGACCTGGACGTGGATGATGTGGAGATGGAGAACTATGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513029.5
3UTR-3UTR CCA 90 bp CGCAGGTCCACGTCGTTGTCGAGCCGCTGGAGGGGCATCCGAGGGTGCTGGGTCACGGGCTCTGCTGGGTaGCTGGGTGCAGCATTCGGG +
Preference number: 2 (lower is better)
Translates to: RRSTSLSSRWRGIRGCWVTGSAG*LGAAFG
Trigger: CCCGAATGCTGCACCCAGCCACCCAGCAGAGCCCGT...GACCCAGCACCCTCGGATGCCCCTCCAGCGGCTCGACAACGACGTGGACCTGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513029.5
3UTR-3UTR TCA 90 bp GAAAAGCGTCGGGTCCCGGTAGGCTCTAGGGACGTGTGCAGTACAGTGCATGGCGCAGGCCGGCCAGCATaGCCGTGCTCGGCCCCCTGG +
Preference number: 2 (lower is better)
Translates to: EKRRVPVGSRDVCSTVHGAGRPA*PCSAPW
Trigger: CCAGGGGGCCGAGCACGGTCATGCTGGCCGGCCTGC...GCCATGCACTGTACTGCACACGTCCCTAGAGCCTACCGGGACCCGACGCTTTTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000274811.9
3UTR-3UTR GCA 90 bp GGCATCCGAGGGTGCTGGGTCTGCAGAGACACAAACTGCCCCAGGGGCGCCATGTGCTGGGTGGCTGGGTaGAGCATTCGGGGGCTCCCG +
Preference number: 2 (lower is better)
Translates to: GIRGCWVCRDTNCPRGAMCWVAG*SIRGLP
Trigger: CGGGAGCCCCCGAATGCTGCACCCAGCCACCCAGCA...CATGGCGCCCCTGGGGCAGTTTGTGTCTCTGCAGACCCAGCACCCTCGGATGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000513029.5
3UTR-3UTR CCA 90 bp CGGGAACACAGGGCTCCCTCTCCCCGTATGGCCCAAGCCCCTCAGGATACGTGTACTCAGGCAGCTCCGTaGCGGGCGGGCAGGCAGGCA +
Preference number: 2 (lower is better)
Translates to: REHRAPSPRMAQAPQDTCTQAAP*RAGRQA
Trigger: TGCCTGCCTGCCCGCCCGCCACGGAGCTGCCTGAGT...ACACGTATCCTGAGGGGCTTGGGCCATACGGGGAGAGGGAGCCCTGTGTTCCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274811.9
3UTR-3UTR CCA 90 bp GGCAGCTGCTGCATGGTGCACGCCTGGATAAGCGGGGGCGGGAGGCAGCAGAGGCATGCTGGGAGCTGCTaGGCACTGCAGCCAGGGATG +
Preference number: 2 (lower is better)
Translates to: GSCCMVHAWISGGGRQQRHAGSC*ALQPGM
Trigger: CATCCCTGGCTGCAGTGCCCAGCAGCTCCCAGCATG...CCTCTGCTGCCTCCCGCCCCCGCTTATCCAGGCGTGCACCATGCAGCAGCTGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000504160.1
ENST00000513029.5
3UTR-3UTR CCA 90 bp GGCCTGATAGGGCACAGGCAGCTGCTGCATGGTGCACGCCTGGATAAGCGGGGGCGTCGGCCCGGCAGATaGGACACGTCCGGTTGGCCT +
Preference number: 2 (lower is better)
Translates to: GLIGHRQLLHGARLDKRGRRPGR*DTSGWP
Trigger: AGGCCAACCGGACGTGTCCCATCTGCCGGGCCGACG...CCCCCGCTTATCCAGGCGTGCACCATGCAGCAGCTGCCTGTGCCCTATCAGGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000513029.5
3UTR-3UTR CCA 90 bp TCGGAGGCGTCGGCCCGGCAGATGGGACACGTCCGGTTGGCCTTCAACCACTTGCTCACTCAGCCTCCCTaGGCACCTCGGAGGCGTCGG +
Preference number: 2 (lower is better)
Translates to: SEASARQMGHVRLAFNHLLTQPP*APRRRR
Trigger: CCGACGCCTCCGAGGTGCCCAGGGAGGCTGAGTGAG...CAAGTGGTTGAAGGCCAACCGGACGTGTCCCATCTGCCGGGCCGACGCCTCCGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513029.5
3UTR-3UTR TCA 90 bp AGGATGTGCCGGCCCCACACGCAGTTCGTTCAGGGCAGCAACCCCAGCTGGGTAGACTCCTCGCTGGGCTaGCCCTGGCACCAGCTCTGG +
Preference number: 2 (lower is better)
Translates to: RMCRPHTQFVQGSNPSWVDSSLG*PWHQLW
Trigger: CCAGAGCTGGTGCCAGGGTCAGCCCAGCGAGGAGTC...TACCCAGCTGGGGTTGCTGCCCTGAACGAACTGCGTGTGGGGCCGGCACATCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274811.9
3UTR-3UTR CCA 90 bp GGCAGCTGCTGCATGGTGCACGCCTGGATAAGCGGGGGCGGGAGGCAGCAGAGGCATCACGGAGCATGCTaGGAGCTGCTGGGCACTGCA +
Preference number: 2 (lower is better)
Translates to: GSCCMVHAWISGGGRQQRHHGAC*ELLGTA
Trigger: TGCAGTGCCCAGCAGCTCCCAGCATGCTCCGTGATG...CCTCTGCTGCCTCCCGCCCCCGCTTATCCAGGCGTGCACCATGCAGCAGCTGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000504160.1
ENST00000513029.5
3UTR-3UTR TCA 90 bp CTCACTCAGCCTCCCTGGGCACCTCGGAGGCGTCGGCCCGGCAGATGGGACACGGGTAATGCTGCCCACTaGACATCACGGAGCATGCTG +
Preference number: 2 (lower is better)
Translates to: LTQPPWAPRRRRPGRWDTGNAAH*TSRSML
Trigger: CAGCATGCTCCGTGATGTTCAGTGGGCAGCATTACC...CGTGTCCCATCTGCCGGGCCGACGCCTCCGAGGTGCCCAGGGAGGCTGAGTGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513029.5
3UTR-3UTR GCA 90 bp AGGATGTGCCGGCCCCACACGCAGTTCGTTCAGGGCAGCAACCCCAGCTGGGTAGGGCACGGGTCTGGCTaGATCCCTGGGAGGGACAAC +
Preference number: 2 (lower is better)
Translates to: RMCRPHTQFVQGSNPSWVGHGSG*IPGRDN
Trigger: GTTGTCCCTCCCAGGGATGCAGCCAGACCCGTGCCC...TACCCAGCTGGGGTTGCTGCCCTGAACGAACTGCGTGTGGGGCCGGCACATCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274811.9
3UTR-3UTR CCA 90 bp GGCGTCGGCCCGGCAGATGGGACACGTCCGGTTGGCCTTCAACCACTTGTCAACTCGTTGTCGAGCCGCTaGAGGGGCATCCGAGGGTGC +
Preference number: 2 (lower is better)
Translates to: GVGPADGTRPVGLQPLVNSLSSR*RGIRGC
Trigger: GCACCCTCGGATGCCCCTCCAGCGGCTCGACAACGA...GTTGACAAGTGGTTGAAGGCCAACCGGACGTGTCCCATCTGCCGGGCCGACGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513029.5
3UTR CAA 90 bp CTGTCCGGGTTAAAGCGGTACGACGGGAGCTGCTCTATGTCTGCTTaGGTGAGACCCCGGGGCTTGGCATCTCCCAGCCGCTCGGCCAGG +
Preference number: 2 (lower is better)
Translates to: LSGLKRYDGSCSMSA*VRPRGLASPSRSAR
Trigger: CCTGGCCGAGCGGCTGGGAGATGCCAAGCCCCGGGGTCTCACCAAAGCAGACATAGAGCAGCTCCCGTCGTACCGCTTTAACCCGGACAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513029.5
3UTR-3UTR CCA 90 bp GCTAGGATGTGCCGGCCCCACACGCAGTTCGTTCAGGGCAGCAACCCCAGCTGGTCTGTCTGCCCATCCTaGGGCCAAGGATCTCCACCG +
Preference number: 2 (lower is better)
Translates to: ARMCRPHTQFVQGSNPSWSVCPS*GQGSPP
Trigger: CGGTGGAGATCCTTGGCCCCAGGATGGGCAGACAGA...CCAGCTGGGGTTGCTGCCCTGAACGAACTGCGTGTGGGGCCGGCACATCCTAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274811.9
3UTR-3UTR CCA 90 bp GCAGCCAGGGATGTGCTGGCCTGTAGGCAAGGGGAAGCCTTGGGTCGTCACTGTACGGGCTCTGCTGGGTaGCTGGGTGCAGCATTCGGG +
Preference number: 2 (lower is better)
Translates to: AARDVLACRQGEALGRHCTGSAG*LGAAFG
Trigger: CCCGAATGCTGCACCCAGCCACCCAGCAGAGCCCGT...ACAGTGACGACCCAAGGCTTCCCCTTGCCTACAGGCCAGCACATCCCTGGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504160.1
ENST00000513029.5
3UTR-3UTR CCA 90 bp GTGTGGAACTCATGGTTGCAGGGGAGGACTCGGAGCAGCTGCCGCGCCTCGAAGCATGCTGGGAGCTGCTaGGCACTGCAGCCAGGGATG +
Preference number: 2 (lower is better)
Translates to: VWNSWLQGRTRSSCRASKHAGSC*ALQPGM
Trigger: CATCCCTGGCTGCAGTGCCCAGCAGCTCCCAGCATG...CTTCGAGGCGCGGCAGCTGCTCCGAGTCCTCCCCTGCAACCATGAGTTCCACAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513029.5
3UTR CAA 90 bp AGCTCCGTGGCGGGCGGGCAGGCAGGCAGACTAGGGAGGGAGTCTTaGGAGCTTGGCAAATGCAGGGGCTTATTGCAGGGACTCCTCGCT +
Preference number: 2 (lower is better)
Translates to: SSVAGGQAGRLGRES*ELGKCRGLLQGLLA
Trigger: AGCGAGGAGTCCCTGCAATAAGCCCCTGCATTTGCCAAGCTCCAAAGACTCCCTCCCTAGTCTGCCTGCCTGCCCGCCCGCCACGGAGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274811.9
3UTR-3UTR TCA 90 bp AGGATGTGCCGGCCCCACACGCAGTTCGTTCAGGGCAGCAACCCCAGCTGGGTAGGAAAAGGAGGGACCTaGGGGTGCACAGGAGGGAGA +
Preference number: 2 (lower is better)
Translates to: RMCRPHTQFVQGSNPSWVGKGGT*GCTGGR
Trigger: TCTCCCTCCTGTGCACCCTCAGGTCCCTCCTTTTCC...TACCCAGCTGGGGTTGCTGCCCTGAACGAACTGCGTGTGGGGCCGGCACATCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000274811.9
3UTR-3UTR TCA 90 bp GCTAGGATGTGCCGGCCCCACACGCAGTTCGTTCAGGGCAGCAACCCCAGCTGGACAGAGCCAGCTGCCTaGGTTCACTGTTCGGGGTCA +
Preference number: 2 (lower is better)
Translates to: ARMCRPHTQFVQGSNPSWTEPAA*VHCSGS
Trigger: TGACCCCGAACAGTGAACTCAGGCAGCTGGCTCTGT...CCAGCTGGGGTTGCTGCCCTGAACGAACTGCGTGTGGGGCCGGCACATCCTAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000274811.9
3UTR-3UTR GCA 90 bp GCTAGGATGTGCCGGCCCCACACGCAGTTCGTTCAGGGCAGCAACCCCAGCTGGGGCTGGAGGGAGAAATaGCCTGAAAAGCGTCGGGTC +
Preference number: 2 (lower is better)
Translates to: ARMCRPHTQFVQGSNPSWGWREK*PEKRRV
Trigger: GACCCGACGCTTTTCAGGGCATTTCTCCCTCCAGCC...CCAGCTGGGGTTGCTGCCCTGAACGAACTGCGTGTGGGGCCGGCACATCCTAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000274811.9
3UTR-3UTR GCA 90 bp GGCATCCGAGGGTGCTGGGTCTGCAGAGACACAAACTGCCCCAGGGGCGCCATGGGTCCCTGGTGCACCTaGTCGTGGAGATCAACCATG +
Preference number: 2 (lower is better)
Translates to: GIRGCWVCRDTNCPRGAMGPWCT*SWRSTM
Trigger: CATGGTTGATCTCCACGAGCAGGTGCACCAGGGACC...CATGGCGCCCCTGGGGCAGTTTGTGTCTCTGCAGACCCAGCACCCTCGGATGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513029.5
3UTR-3UTR GCA 90 bp TTTGGTGAGACCCCGGGGCTTGGCATCTCCCAGCCGCTCGGCCAGGTTCAGGAGGGCGGTATCTCTGGGTaGTCAGTCTCCGTGGCATCA +
Preference number: 2 (lower is better)
Translates to: FGETPGLGISQPLGQVQEGGISG*SVSVAS
Trigger: TGATGCCACGGAGACTGAGCACCCAGAGATACCGCC...CTCCTGAACCTGGCCGAGCGGCTGGGAGATGCCAAGCCCCGGGGTCTCACCAAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513029.5
3UTR-3UTR CCA 90 bp CAGAGGGAGAGGAGATTGGGCACGGGTCTGGCTGCATCCCTGGGAGGGACAACCCTCCCTCTCCCCGTATaGCCCAAGCCCCTCAGGATA +
Preference number: 2 (lower is better)
Translates to: QRERRLGTGLAASLGGTTLPLPV*PKPLRI
Trigger: TATCCTGAGGGGCTTGGGCCATACGGGGAGAGGGAG...GGTTGTCCCTCCCAGGGATGCAGCCAGACCCGTGCCCAATCTCCTCTCCCTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274811.9
3UTR-3UTR CCA 90 bp ATAGGGCACAGGCAGCTGCTGCATGGTGCACGCCTGGATAAGCGGGGGCGGGAGATGAACGGGCTCTGCTaGGTGGCTGGGTGCAGCATT +
Preference number: 2 (lower is better)
Translates to: IGHRQLLHGARLDKRGREMNGLC*VAGCSI
Trigger: AATGCTGCACCCAGCCACCCAGCAGAGCCCGTTCAT...CTCCCGCCCCCGCTTATCCAGGCGTGCACCATGCAGCAGCTGCCTGTGCCCTAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000504160.1
ENST00000513029.5
3UTR-3UTR CCA 90 bp GAGGGTGCTGGGTCTGCAGAGACACAAACTGCCCCAGGGGCGCCATGTGGGTGGATGAACGGGCTCTGCTaGGTGGCTGGGTGCAGCATT +
Preference number: 2 (lower is better)
Translates to: EGAGSAETQTAPGAPCGWMNGLC*VAGCSI
Trigger: AATGCTGCACCCAGCCACCCAGCAGAGCCCGTTCAT...CCACCCACATGGCGCCCCTGGGGCAGTTTGTGTCTCTGCAGACCCAGCACCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513029.5
3UTR-3UTR TCA 90 bp AGGCGTCGGCCCGGCAGATGGGACACGTCCGGTTGGCCTTCAACCACTTGTCAACGTGGAGATCAACCATaGACGGGCTCTGCTGGGTGG +
Preference number: 2 (lower is better)
Translates to: RRRPGRWDTSGWPSTTCQRGDQP*TGSAGW
Trigger: CCACCCAGCAGAGCCCGTTCATGGTTGATCTCCACG...TTGACAAGTGGTTGAAGGCCAACCGGACGTGTCCCATCTGCCGGGCCGACGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513029.5
3UTR-3UTR TCA 90 bp GGCGTCGGCCCGGCAGATGGGACACGTCCGGTTGGCCTTCAACCACTTGTCAACCTATGTCTGCTTTGGTaGGACCCCGGGGCTTGGCAT +
Preference number: 2 (lower is better)
Translates to: GVGPADGTRPVGLQPLVNLCLLW*DPGAWH
Trigger: ATGCCAAGCCCCGGGGTCTCACCAAAGCAGACATAG...GTTGACAAGTGGTTGAAGGCCAACCGGACGTGTCCCATCTGCCGGGCCGACGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513029.5
3UTR-3UTR GCA 90 bp GCTAGGATGTGCCGGCCCCACACGCAGTTCGTTCAGGGCAGCAACCCCAGCTGGCAACACAGAGCCAGCTaGCTGAGTTCACTGTTCGGG +
Preference number: 2 (lower is better)
Translates to: ARMCRPHTQFVQGSNPSWQHRAS*LSSLFG
Trigger: CCCGAACAGTGAACTCAGGCAGCTGGCTCTGTGTTG...CCAGCTGGGGTTGCTGCCCTGAACGAACTGCGTGTGGGGCCGGCACATCCTAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274811.9
3UTR-3UTR GCA 90 bp GCTGTCCGGGTTAAAGCGGTACGACGGGAGCTGCTCTATGTCTGCTTTGGTGAGGGCGGGGGCAGTGGCTaGTGCAGGCGGTATCTCTGG +
Preference number: 2 (lower is better)
Translates to: AVRVKAVRRELLYVCFGEGGGSG*CRRYLW
Trigger: CCAGAGATACCGCCTGCAGCAGCCACTGCCCCCGCC...CTCACCAAAGCAGACATAGAGCAGCTCCCGTCGTACCGCTTTAACCCGGACAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000513029.5
3UTR-3UTR CCA 90 bp CAGAGGGAGAGGAGATTGGGCACGGGTCTGGCTGCATCCCTGGGAGGGACAACCCCTTCTGACCCAGGATaGTGCTCTGTCTGCCCATCC +
Preference number: 2 (lower is better)
Translates to: QRERRLGTGLAASLGGTTPSDPG*CSVCPS
Trigger: GGATGGGCAGACAGAGCACCATCCTGGGTCAGAAGG...GGTTGTCCCTCCCAGGGATGCAGCCAGACCCGTGCCCAATCTCCTCTCCCTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274811.9
3UTR-3UTR CCA 90 bp AGCATGACCGTGCTCGGCCCCCTGGGCACTCGGTCCCAGTTGGTCCCTATACCCCTGGAATGTTGTTCCTaGGATGAGGGTCCCCTAGGG +
Preference number: 2 (lower is better)
Translates to: SMTVLGPLGTRSQLVPIPLECCS*DEGPLG
Trigger: CCCTAGGGGACCCTCATCCCAGGAACAACATTCCAG...GGGTATAGGGACCAACTGGGACCGAGTGCCCAGGGGGCCGAGCACGGTCATGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000274811.9
3UTR-3UTR CCA 90 bp GGCCAGGTTCAGGAGGGCCTCATAGTTCTCCATCTCCACATCATCCACGTCCAGCGACGGGGAAAGGGCTaGGCCAGGCGCAGAGGTGGA +
Preference number: 2 (lower is better)
Translates to: GQVQEGLIVLHLHIIHVQRRGKG*ARRRGG
Trigger: TCCACCTCTGCGCCTGGCCCAGCCCTTTCCCCGTCG...CTGGACGTGGATGATGTGGAGATGGAGAACTATGAGGCCCTCCTGAACCTGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513029.5
3UTR-3UTR GCA 90 bp GAGGCAGCAGAGGGGGTAATGCTGCCCACTGAACATCACGGAGCATGCTGGGAGGGGACAGGTCCCTGGTaGACCTGCTCGTGGAGATCA +
Preference number: 2 (lower is better)
Translates to: EAAEGVMLPTEHHGACWEGTGPW*TCSWRS
Trigger: TGATCTCCACGAGCAGGTGCACCAGGGACCTGTCCC...CTCCCAGCATGCTCCGTGATGTTCAGTGGGCAGCATTACCCCCTCTGCTGCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000504160.1
ENST00000513029.5
3UTR-3UTR CCA 90 bp GAAAAGCGTCGGGTCCCGGTAGGCTCTAGGGACGTGTGCAGTACAGTGCATGGCGTCTGTCTACGCACCTaGCAGTGCCACCTGGGCAGA +
Preference number: 2 (lower is better)
Translates to: EKRRVPVGSRDVCSTVHGVCLRT*QCHLGR
Trigger: TCTGCCCAGGTGGCACTGCCAGGTGCGTAGACAGAC...GCCATGCACTGTACTGCACACGTCCCTAGAGCCTACCGGGACCCGACGCTTTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274811.9
3UTR-3UTR GCA 90 bp TCCGGGTTAAAGCGGTACGACGGGAGCTGCTCTATGTCTGCTTTGGTGAGACCCCTGCAGCCAGGGATGTaGTGGCCTGTAGGCAAGGGG +
Preference number: 2 (lower is better)
Translates to: SGLKRYDGSCSMSALVRPLQPGM*WPVGKG
Trigger: CCCCTTGCCTACAGGCCAGCACATCCCTGGCTGCAG...GGGTCTCACCAAAGCAGACATAGAGCAGCTCCCGTCGTACCGCTTTAACCCGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513029.5
3UTR-3UTR CCA 90 bp CGCAGTTCGTTCAGGGCAGCAACCCCAGCTGGGTATAGGACAAGAAAGGATTGGGAGGGAGCGGACCCCTaGCACTCAGTGCCAGCAGGA +
Preference number: 2 (lower is better)
Translates to: RSSFRAATPAGYRTRKDWEGADP*HSVPAG
Trigger: TCCTGCTGGCACTGAGTGCCAGGGGTCCGCTCCCTC...CCAATCCTTTCTTGTCCTATACCCAGCTGGGGTTGCTGCCCTGAACGAACTGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274811.9
3UTR-3UTR CCA 90 bp CCCCTGGGCACTCGGTCCCAGTTGGTCCCTATACCCGCCCCTATTAAACCAAAAAGCTCGGGATTAGGCTaGGACGCCCTCCAGCCTGAG +
Preference number: 2 (lower is better)
Translates to: PLGTRSQLVPIPAPIKPKSSGLG*DALQPE
Trigger: CTCAGGCTGGAGGGCGTCCCAGCCTAATCCCGAGCT...TTTTGGTTTAATAGGGGCGGGTATAGGGACCAACTGGGACCGAGTGCCCAGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000274811.9
3UTR-3UTR CCA 90 bp CGTCTGCTCCGACTGATGGCTGTCCGGGTTAAAGCGGTACGACGGGAGCTGCTCTGGTGCACCTGCTCGTaGAGATCAACCATGAACGGG +
Preference number: 2 (lower is better)
Translates to: RLLRLMAVRVKAVRRELLWCTCS*RSTMNG
Trigger: CCCGTTCATGGTTGATCTCCACGAGCAGGTGCACCA...GAGCAGCTCCCGTCGTACCGCTTTAACCCGGACAGCCATCAGTCGGAGCAGACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513029.5
3UTR-3UTR CCA 90 bp CAGGATGTAGTGGTCACTGGAGATGAGGTGGGGGTAGGCCTGATAGGGCACAGGGGCAAGGGGAAGCCTTaGGTCGTCACTGTGGTGACC +
Preference number: 2 (lower is better)
Translates to: QDVVVTGDEVGVGLIGHRGKGKP*VVTVVT
Trigger: GGTCACCACAGTGACGACCCAAGGCTTCCCCTTGCC...CCTGTGCCCTATCAGGCCTACCCCCACCTCATCTCCAGTGACCACTACATCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000504160.1
ENST00000513029.5
3UTR CAA 90 bp AGACTAGGGAGGGAGTCTTTGGAGCTTGGCAAATGCAGGGGCTTATaGCAGGGACTCCTCGCTGGGCTGACCCTGGCACCAGCTCTGGAA +
Preference number: 2 (lower is better)
Translates to: RLGRESLELGKCRGL*QGLLAGLTLAPALE
Trigger: TTCCAGAGCTGGTGCCAGGGTCAGCCCAGCGAGGAGTCCCTGCAATAAGCCCCTGCATTTGCCAAGCTCCAAAGACTCCCTCCCTAGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274811.9
3UTR-3UTR GCA 90 bp CAGAGGGAGAGGAGATTGGGCACGGGTCTGGCTGCATCCCTGGGAGGGACAACCTTGGAGCTTGGCAAATaGAGGGGCTTATTGCAGGGA +
Preference number: 2 (lower is better)
Translates to: QRERRLGTGLAASLGGTTLELGK*RGLLQG
Trigger: TCCCTGCAATAAGCCCCTGCATTTGCCAAGCTCCAA...GGTTGTCCCTCCCAGGGATGCAGCCAGACCCGTGCCCAATCTCCTCTCCCTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274811.9
3UTR-3UTR GCA 90 bp CCCCTGGGCACTCGGTCCCAGTTGGTCCCTATACCCGCCCCTATTAAACCAAAAGGATGGTGCTCTGTCTaGCCATCCTGGGGCCAAGGA +
Preference number: 2 (lower is better)
Translates to: PLGTRSQLVPIPAPIKPKGWCSV*PSWGQG
Trigger: TCCTTGGCCCCAGGATGGGCAGACAGAGCACCATCC...TTTTGGTTTAATAGGGGCGGGTATAGGGACCAACTGGGACCGAGTGCCCAGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000274811.9
3UTR-3UTR GCA 90 bp CAGGATGTAGTGGTCACTGGAGATGAGGTGGGGGTAGGCCTGATAGGGCACAGGGGTCCCTGGTGCACCTaGTCGTGGAGATCAACCATG +
Preference number: 2 (lower is better)
Translates to: QDVVVTGDEVGVGLIGHRGPWCT*SWRSTM
Trigger: CATGGTTGATCTCCACGAGCAGGTGCACCAGGGACC...CCTGTGCCCTATCAGGCCTACCCCCACCTCATCTCCAGTGACCACTACATCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000504160.1
ENST00000513029.5
3UTR-3UTR CCA 90 bp CGCAGTTCGTTCAGGGCAGCAACCCCAGCTGGGTATAGGACAAGAAAGGATTGGGTCTGGCTGCATCCCTaGGAGGGACAACCACCGGGA +
Preference number: 2 (lower is better)
Translates to: RSSFRAATPAGYRTRKDWVWLHP*EGQPPG
Trigger: TCCCGGTGGTTGTCCCTCCCAGGGATGCAGCCAGAC...CCAATCCTTTCTTGTCCTATACCCAGCTGGGGTTGCTGCCCTGAACGAACTGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274811.9
3UTR-3UTR CCA 90 bp AGGATGTGCCGGCCCCACACGCAGTTCGTTCAGGGCAGCAACCCCAGCTGGGTAAGGACAAGAAAGGATTaGGACCAGGGAAAGTGGGTG +
Preference number: 2 (lower is better)
Translates to: RMCRPHTQFVQGSNPSWVRTRKD*DQGKWV
Trigger: CACCCACTTTCCCTGGTCCCAATCCTTTCTTGTCCT...TACCCAGCTGGGGTTGCTGCCCTGAACGAACTGCGTGTGGGGCCGGCACATCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274811.9
3UTR-3UTR CCA 90 bp TCCGGGTTAAAGCGGTACGACGGGAGCTGCTCTATGTCTGCTTTGGTGAGACCCGGCAAGGGGAAGCCTTaGGTCGTCACTGTGGTGACC +
Preference number: 2 (lower is better)
Translates to: SGLKRYDGSCSMSALVRPGKGKP*VVTVVT
Trigger: GGTCACCACAGTGACGACCCAAGGCTTCCCCTTGCC...GGGTCTCACCAAAGCAGACATAGAGCAGCTCCCGTCGTACCGCTTTAACCCGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513029.5
3UTR-3UTR CCA 90 bp TCCGGGTTAAAGCGGTACGACGGGAGCTGCTCTATGTCTGCTTTGGTGAGACCCCATCACGGAGCATGCTaGGAGCTGCTGGGCACTGCA +
Preference number: 2 (lower is better)
Translates to: SGLKRYDGSCSMSALVRPHHGAC*ELLGTA
Trigger: TGCAGTGCCCAGCAGCTCCCAGCATGCTCCGTGATG...GGGTCTCACCAAAGCAGACATAGAGCAGCTCCCGTCGTACCGCTTTAACCCGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513029.5
3UTR-3UTR TCA 90 bp CAGAAGTTGGTAAATAAGAGAGTAAACAATGGCAAGCCCCCACCACAGGAAATCGGGGTGGGACCAGGCTaGCGGGCCCCACGGCAGGCT +
Preference number: 2 (lower is better)
Translates to: QKLVNKRVNNGKPPPQEIGVGPG*RAPRQA
Trigger: AGCCTGCCGTGGGGCCCGTCAGCCTGGTCCCACCCC...GATTTCCTGTGGTGGGGGCTTGCCATTGTTTACTCTCTTATTTACCAACTTCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000274811.9
3UTR-3UTR GCA 90 bp CCATTGCTGTTGGTGACATTGGCAGCATCGAGAGGAAGTAGGGCAGGAAGCTGGGGCACAGGCAGCTGCTaGATGGTGCACGCCTGGATA +
Preference number: 2 (lower is better)
Translates to: PLLLVTLAASRGSRAGSWGTGSC*MVHAWI
Trigger: TATCCAGGCGTGCACCATGCAGCAGCTGCCTGTGCC...CCAGCTTCCTGCCCTACTTCCTCTCGATGCTGCCAATGTCACCAACAGCAATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513029.5
3UTR-3UTR CCA 90 bp CCATTGCTGTTGGTGACATTGGCAGCATCGAGAGGAAGTAGGGCAGGAAGCTGGAGAGGGACAGGTCCCTaGTGCACCTGCTCGTGGAGA +
Preference number: 2 (lower is better)
Translates to: PLLLVTLAASRGSRAGSWRGTGP*CTCSWR
Trigger: TCTCCACGAGCAGGTGCACCAGGGACCTGTCCCTCT...CCAGCTTCCTGCCCTACTTCCTCTCGATGCTGCCAATGTCACCAACAGCAATGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513029.5
3UTR-3UTR CCA 90 bp CGCAGTTCGTTCAGGGCAGCAACCCCAGCTGGGTATAGGACAAGAAAGGATTGGACCAGGGAAAGTGGGTaGGAAGCTCAGCCAGACCCT +
Preference number: 2 (lower is better)
Translates to: RSSFRAATPAGYRTRKDWTRESG*EAQPDP
Trigger: AGGGTCTGGCTGAGCTTCCCACCCACTTTCCCTGGT...CCAATCCTTTCTTGTCCTATACCCAGCTGGGGTTGCTGCCCTGAACGAACTGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274811.9
3UTR-3UTR TCA 90 bp CGCAGTTCGTTCAGGGCAGCAACCCCAGCTGGGTATAGGACAAGAAAGGATTGGGAGCATGAGACCTTCTaGCCCAGGATGGTGCTCTGT +
Preference number: 2 (lower is better)
Translates to: RSSFRAATPAGYRTRKDWEHETF*PRMVLC
Trigger: ACAGAGCACCATCCTGGGTCAGAAGGTCTCATGCTC...CCAATCCTTTCTTGTCCTATACCCAGCTGGGGTTGCTGCCCTGAACGAACTGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274811.9
3UTR-3UTR TCA 90 bp AGGATGTGCCGGCCCCACACGCAGTTCGTTCAGGGCAGCAACCCCAGCTGGGTATTTGGGCCAAATGAATaGACAAAAACTGCTGCTCCT +
Preference number: 2 (lower is better)
Translates to: RMCRPHTQFVQGSNPSWVFGPNE*TKTAAP
Trigger: AGGAGCAGCAGTTTTTGTTCATTCATTTGGCCCAAA...TACCCAGCTGGGGTTGCTGCCCTGAACGAACTGCGTGTGGGGCCGGCACATCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000274811.9
3UTR-3UTR TCA 90 bp CGCAGTTCGTTCAGGGCAGCAACCCCAGCTGGGTATAGGACAAGAAAGGATTGGCGCCATTTCAGAGCATaGGACCTTCTGACCCAGGAT +
Preference number: 2 (lower is better)
Translates to: RSSFRAATPAGYRTRKDWRHFRA*DLLTQD
Trigger: ATCCTGGGTCAGAAGGTCTCATGCTCTGAAATGGCG...CCAATCCTTTCTTGTCCTATACCCAGCTGGGGTTGCTGCCCTGAACGAACTGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274811.9
3UTR-3UTR TCA 90 bp CAGAAGTTGGTAAATAAGAGAGTAAACAATGGCAAGCCCCCACCACAGGAAATCTGGTTGGAGCATCCCTaGGGCAGCAGGCGCCAGGGG +
Preference number: 2 (lower is better)
Translates to: QKLVNKRVNNGKPPPQEIWLEHP*GSRRQG
Trigger: CCCCTGGCGCCTGCTGCCTCAGGGATGCTCCAACCA...GATTTCCTGTGGTGGGGGCTTGCCATTGTTTACTCTCTTATTTACCAACTTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000274811.9
3UTR-3UTR TCA 90 bp CTCGGCCAGGTTCAGGAGGGCCTCATAGTTCTCCATCTCCACATCATCCACGTCCTCCGTGGCATCATGTaGGAATATGGCACACCAAAG +
Preference number: 2 (lower is better)
Translates to: LGQVQEGLIVLHLHIIHVLRGIM*EYGTPK
Trigger: CTTTGGTGTGCCATATTCTCACATGATGCCACGGAG...GACGTGGATGATGTGGAGATGGAGAACTATGAGGCCCTCCTGAACCTGGCCGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513029.5
3UTR-3UTR CCA 90 bp CAGAAGTTGGTAAATAAGAGAGTAAACAATGGCAAGCCCCCACCACAGGAAATCGCAGGGACTCCTCGCTaGGCTGACCCTGGCACCAGC +
Preference number: 2 (lower is better)
Translates to: QKLVNKRVNNGKPPPQEIAGTPR*ADPGTS
Trigger: GCTGGTGCCAGGGTCAGCCCAGCGAGGAGTCCCTGC...GATTTCCTGTGGTGGGGGCTTGCCATTGTTTACTCTCTTATTTACCAACTTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000274811.9
3UTR CAA 90 bp GCTATAAATATAGAAACGTCACCTGGAGTTATATACAGTAAGACTTaGGGTTCTCCATGGGGGTGGGACCAGGCTGACGGGCCCCACGGC +
Preference number: 2 (lower is better)
Translates to: AINIETSPGVIYSKT*GSPWGWDQADGPHG
Trigger: GCCGTGGGGCCCGTCAGCCTGGTCCCACCCCCATGGAGAACCCAAAGTCTTACTGTATATAACTCCAGGTGACGTTTCTATATTTATAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000274811.9
3UTR-3UTR CCA 90 bp CAGAAGTTGGTAAATAAGAGAGTAAACAATGGCAAGCCCCCACCACAGGAAATCCCTGGCAGTGCCACCTaGGCAGAGGGCACGCCATTT +
Preference number: 2 (lower is better)
Translates to: QKLVNKRVNNGKPPPQEIPGSAT*AEGTPF
Trigger: AAATGGCGTGCCCTCTGCCCAGGTGGCACTGCCAGG...GATTTCCTGTGGTGGGGGCTTGCCATTGTTTACTCTCTTATTTACCAACTTCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000274811.9
3UTR-3UTR CCA 90 bp CCATTGCTGTTGGTGACATTGGCAGCATCGAGAGGAAGTAGGGCAGGAAGCTGGCATCATGTGAGAATATaGCACACCAAAGGACAGCTC +
Preference number: 2 (lower is better)
Translates to: PLLLVTLAASRGSRAGSWHHVRI*HTKGQL
Trigger: GAGCTGTCCTTTGGTGTGCCATATTCTCACATGATG...CCAGCTTCCTGCCCTACTTCCTCTCGATGCTGCCAATGTCACCAACAGCAATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513029.5
3UTR-3UTR CCA 90 bp CAGAAGTTGGTAAATAAGAGAGTAAACAATGGCAAGCCCCCACCACAGGAAATCAGAGGGAGAGGAGATTaGGCACGGGTCTGGCTGCAT +
Preference number: 2 (lower is better)
Translates to: QKLVNKRVNNGKPPPQEIRGRGD*ARVWLH
Trigger: ATGCAGCCAGACCCGTGCCCAATCTCCTCTCCCTCT...GATTTCCTGTGGTGGGGGCTTGCCATTGTTTACTCTCTTATTTACCAACTTCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000274811.9
3UTR-3UTR CCA 90 bp GCTATAAATATAGAAACGTCACCTGGAGTTATATACAGTAAGACTTTGGGTTCTCCGTGCTCGGCCCCCTaGGCACTCGGTCCCAGTTGG +
Preference number: 2 (lower is better)
Translates to: AINIETSPGVIYSKTLGSPCSAP*ALGPSW
Trigger: CCAACTGGGACCGAGTGCCCAGGGGGCCGAGCACGG...AGAACCCAAAGTCTTACTGTATATAACTCCAGGTGACGTTTCTATATTTATAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000274811.9
3UTR-3UTR TCA 90 bp CAGAAGTTGGTAAATAAGAGAGTAAACAATGGCAAGCCCCCACCACAGGAAATCTCAGGAAATGGCTCGTaGCACCGTCTGTCTACGCAC +
Preference number: 2 (lower is better)
Translates to: QKLVNKRVNNGKPPPQEISGNGS*HRLSTH
Trigger: GTGCGTAGACAGACGGTGTCACGAGCCATTTCCTGA...GATTTCCTGTGGTGGGGGCTTGCCATTGTTTACTCTCTTATTTACCAACTTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000274811.9
3UTR-3UTR CCA 90 bp GCTATAAATATAGAAACGTCACCTGGAGTTATATACAGTAAGACTTTGGGTTCTGCTGGGAAGGCCCCCTaGAGATGGGGGTCCACAGCC +
Preference number: 2 (lower is better)
Translates to: AINIETSPGVIYSKTLGSAGKAP*RWGSTA
Trigger: GGCTGTGGACCCCCATCTCCAGGGGGCCTTCCCAGC...AGAACCCAAAGTCTTACTGTATATAACTCCAGGTGACGTTTCTATATTTATAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000274811.9
3UTR CAA 90 bp AGAAATTGTCTTAAATATCCACATCCCCAAATCCTACACGTGATTTaGGGCCAAATGAATGAACAAAAACTGCTGCTCCTCACGTTCATG +
Preference number: 2 (lower is better)
Translates to: RNCLKYPHPQILHVI*GQMNEQKLLLLTFM
Trigger: CATGAACGTGAGGAGCAGCAGTTTTTGTTCATTCATTTGGCCCAAAATCACGTGTAGGATTTGGGGATGTGGATATTTAAGACAATTTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000274811.9
3UTR CCA 72 bp CCGGGCAGGCGGCTGCGTGGCCTCACTCAGCCTCCCTaGGCACCTCGGAGGCGTCGGCCCGGCAGATGGGAC +
Preference number: 3 (lower is better)
Translates to: PGRRLRGLTQPP*APRRRRPGRWD
Trigger: GTCCCATCTGCCGGGCCGACGCCTCCGAGGTGCCCAGGGAGGCTGAGTGAGGCCACGCAGCCGCCTGCCCGG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506378.1
ENST00000513029.5
3UTR TCA 72 bp CAGCCCGGCACACGCATGCATGCAGGCCGGCCAGCATaGCCGTGCTCGGCCCCCTGGGCACTCGGTCCCAGT +
Preference number: 3 (lower is better)
Translates to: QPGTRMHAGRPA*PCSAPWALGPS
Trigger: ACTGGGACCGAGTGCCCAGGGGGCCGAGCACGGTCATGCTGGCCGGCCTGCATGCATGCGTGTGCCGGGCTG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000274811.9
3UTR GCA 72 bp CATGGCAGTTATCAGCTGAGCACAGACCCCCAACCCTaGCCCACGACCGCCGGCCGCCCAGCCCAGCCCGGC +
Preference number: 3 (lower is better)
Translates to: HGSYQLSTDPQP*PTTAGRPAQPG
Trigger: GCCGGGCTGGGCTGGGCGGCCGGCGGTCGTGGGGCAGGGTTGGGGGTCTGTGCTCAGCTGATAACTGCCATG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000274811.9
3UTR CCA 72 bp CCTCCCTGGGCACCTCGGAGGCGTCGGCCCGGCAGATaGGACACGTCCGGTTGGCCTGTGGGAACATGCACG +
Preference number: 3 (lower is better)
Translates to: PPWAPRRRRPGR*DTSGWPVGTCT
Trigger: CGTGCATGTTCCCACAGGCCAACCGGACGTGTCCCATCTGCCGGGCCGACGCCTCCGAGGTGCCCAGGGAGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506378.1
3UTR-3UTR CAA 90 bp CACCTCGGAGGCGTCGGCCCGGCAGATGGGACACGTCCGGTTGGCCTTCAACCAGTGAGACCCCGGGGCTaGGCATCTCCCAGCCGCTCG +
Preference number: 3 (lower is better)
Translates to: HLGGVGPADGTRPVGLQPVRPRG*ASPSRS
Trigger: CGAGCGGCTGGGAGATGCCAAGCCCCGGGGTCTCAC...TGGTTGAAGGCCAACCGGACGTGTCCCATCTGCCGGGCCGACGCCTCCGAGGTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513029.5
3UTR GCA 72 bp GGTTGGAGCATCCCTGAGGCAGCAGGCGCCAGGGGCTaGCTGCTAGGATGTGCCGGCCCCACACGCAGTTCG +
Preference number: 3 (lower is better)
Translates to: GWSIPEAAGARG*LLGCAGPTRSS
Trigger: CGAACTGCGTGTGGGGCCGGCACATCCTAGCAGGCAGCCCCTGGCGCCTGCTGCCTCAGGGATGCTCCAACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274811.9
3UTR GCA 72 bp AGATCAACCATGAACGGGCTCTGCTGGGTGGCTGGGTaGAGCATTCGGGGGCTCCCGCCGGCAGGAGCCGAG +
Preference number: 3 (lower is better)
Translates to: RSTMNGLCWVAG*SIRGLPPAGAE
Trigger: CTCGGCTCCTGCCGGCGGGAGCCCCCGAATGCTGCACCCAGCCACCCAGCAGAGCCCGTTCATGGTTGATCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000504160.1
ENST00000513029.5
3UTR CCA 72 bp GTGGAGATCAACCATGAACGGGCTCTGCTGGGTGGCTaGGTGCAGCATTCGGGGGCTCCCGCCGGCAGGAGC +
Preference number: 3 (lower is better)
Translates to: VEINHERALLGG*VQHSGAPAGRS
Trigger: GCTCCTGCCGGCGGGAGCCCCCGAATGCTGCACCCAGCCACCCAGCAGAGCCCGTTCATGGTTGATCTCCAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000504160.1
ENST00000513029.5
3UTR-3UTR CAA 90 bp CTCACTCAGCCTCCCTGGGCACCTCGGAGGCGTCGGCCCGGCAGATGGGACACGTGGGCCCCATTGCTGTaGGTGACATTGGCAGCATCG +
Preference number: 3 (lower is better)
Translates to: LTQPPWAPRRRRPGRWDTWAPLL*VTLAAS
Trigger: CGATGCTGCCAATGTCACCAACAGCAATGGGGCCCA...CGTGTCCCATCTGCCGGGCCGACGCCTCCGAGGTGCCCAGGGAGGCTGAGTGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513029.5
3UTR TCA 72 bp CCACTGCGAGGAGAACGAGGGTGGTTGGAGCATCCCTaGGGCAGCAGGCGCCAGGGGCTGCCTGCTAGGATG +
Preference number: 3 (lower is better)
Translates to: PLRGERGWLEHP*GSRRQGLPARM
Trigger: CATCCTAGCAGGCAGCCCCTGGCGCCTGCTGCCTCAGGGATGCTCCAACCACCCTCGTTCTCCTCGCAGTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274811.9
3UTR TCA 72 bp GGGGCGGGAGGCAGCAGAGGGGGTAATGCTGCCCACTaGACATCACGGAGCATGCTGGGAGCTGCTGGGCAC +
Preference number: 3 (lower is better)
Translates to: GAGGSRGGNAAH*TSRSMLGAAGH
Trigger: GTGCCCAGCAGCTCCCAGCATGCTCCGTGATGTTCAGTGGGCAGCATTACCCCCTCTGCTGCCTCCCGCCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000504160.1
ENST00000513029.5
3UTR GCA 72 bp CTCTCCCCGTATGGCCCAAGCCCCTCAGGATACGTGTaGCCCAGCTCGGGATTAGGCTGGGACGCCCTCCAG +
Preference number: 3 (lower is better)
Translates to: LSPYGPSPSGYV*PSSGLGWDALQ
Trigger: CTGGAGGGCGTCCCAGCCTAATCCCGAGCTGGGGCACACGTATCCTGAGGGGCTTGGGCCATACGGGGAGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274811.9
3UTR CCA 72 bp CCCTCAGGATACGTGTGCCCCAGCTCGGGATTAGGCTaGGACGCCCTCCAGCCTGAGGGTGGGGCTGGAATG +
Preference number: 3 (lower is better)
Translates to: PSGYVCPSSGLG*DALQPEGGAGM
Trigger: CATTCCAGCCCCACCCTCAGGCTGGAGGGCGTCCCAGCCTAATCCCGAGCTGGGGCACACGTATCCTGAGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274811.9
3UTR CCA 72 bp GGGAGAGGAGATTGGGCACGGGTCTGGCTGCATCCCTaGGAGGGACAACCACCGGGAACACAGGGCTCCCTC +
Preference number: 3 (lower is better)
Translates to: GRGDWARVWLHP*EGQPPGTQGSL
Trigger: GAGGGAGCCCTGTGTTCCCGGTGGTTGTCCCTCCCAGGGATGCAGCCAGACCCGTGCCCAATCTCCTCTCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274811.9
3UTR CCA 72 bp ACCTGCTCGTGGAGATCAACCATGAACGGGCTCTGCTaGGTGGCTGGGTGCAGCATTCGGGGGCTCCCGCCG +
Preference number: 3 (lower is better)
Translates to: TCSWRSTMNGLC*VAGCSIRGLPP
Trigger: CGGCGGGAGCCCCCGAATGCTGCACCCAGCCACCCAGCAGAGCCCGTTCATGGTTGATCTCCACGAGCAGGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000504160.1
ENST00000513029.5
3UTR CCA 72 bp CCTCCCTGGGCACCTCGGAGGCGTCGGCCCGGCAGATaGGACACGTCCGGTTGGCCTTCAACCACTTGTCAA +
Preference number: 3 (lower is better)
Translates to: PPWAPRRRRPGR*DTSGWPSTTCQ
Trigger: TTGACAAGTGGTTGAAGGCCAACCGGACGTGTCCCATCTGCCGGGCCGACGCCTCCGAGGTGCCCAGGGAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513029.5
3UTR TCA 72 bp AGCGGTACGACGGGAGCTGCTCTATGTCTGCTTTGGTaGGACCCCGGGGCTTGGCATCTCCCAGCCGCTCGG +
Preference number: 3 (lower is better)
Translates to: SGTTGAALCLLW*DPGAWHLPAAR
Trigger: CCGAGCGGCTGGGAGATGCCAAGCCCCGGGGTCTCACCAAAGCAGACATAGAGCAGCTCCCGTCGTACCGCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513029.5
3UTR GCA 72 bp TGCACCTGCTCGTGGAGATCAACCATGAACGGGCTCTaGTGGGTGGCTGGGTGCAGCATTCGGGGGCTCCCG +
Preference number: 3 (lower is better)
Translates to: CTCSWRSTMNGL*WVAGCSIRGLP
Trigger: CGGGAGCCCCCGAATGCTGCACCCAGCCACCCAGCAGAGCCCGTTCATGGTTGATCTCCACGAGCAGGTGCA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000504160.1
ENST00000513029.5
3UTR CCA 72 bp CCTTCTGACCCAGGATGGTGCTCTGTCTGCCCATCCTaGGGCCAAGGATCTCCACCGGCCCCACTGAGGGAG +
Preference number: 3 (lower is better)
Translates to: PSDPGWCSVCPS*GQGSPPAPLRE
Trigger: CTCCCTCAGTGGGGCCGGTGGAGATCCTTGGCCCCAGGATGGGCAGACAGAGCACCATCCTGGGTCAGAAGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274811.9
3UTR-3UTR CAA 90 bp TCGGAGGCGTCGGCCCGGCAGATGGGACACGTCCGGTTGGCCTTCAACCACTTGAGGCAAGGGGAAGCCTaGGGTCGTCACTGTGGTGAC +
Preference number: 3 (lower is better)
Translates to: SEASARQMGHVRLAFNHLRQGEA*GRHCGD
Trigger: GTCACCACAGTGACGACCCAAGGCTTCCCCTTGCCT...CAAGTGGTTGAAGGCCAACCGGACGTGTCCCATCTGCCGGGCCGACGCCTCCGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513029.5
3UTR TCA 72 bp CCCTGGCACTCAGTGCCAGCAGGAAAAGGAGGGACCTaGGGGTGCACAGGAGGGAGACCCGATCAGGGACAC +
Preference number: 3 (lower is better)
Translates to: PWHSVPAGKGGT*GCTGGRPDQGH
Trigger: GTGTCCCTGATCGGGTCTCCCTCCTGTGCACCCTCAGGTCCCTCCTTTTCCTGCTGGCACTGAGTGCCAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274811.9
3UTR CCA 72 bp ACAGCCTTCCTGGTCCCCATCCTCCTGGGACTTCCTTaGAGGAGATTCGCCCAGGCAGGTGGGAGTTGGGCC +
Preference number: 3 (lower is better)
Translates to: TAFLVPILLGLP*RRFAQAGGSWA
Trigger: GGCCCAACTCCCACCTGCCTGGGCGAATCTCCTCCAAGGAAGTCCCAGGAGGATGGGGACCAGGAAGGCTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274811.9
3UTR-3UTR CAA 90 bp CCCGATCAGGGACACTCAGGCAGCTCCGTGGCGGGCGGGCAGGCAGGCAGACTAGGGAGTCTTTGGAGCTaGGCAAATGCAGGGGCTTAT +
Preference number: 3 (lower is better)
Translates to: PDQGHSGSSVAGGQAGRLGSLWS*ANAGAY
Trigger: ATAAGCCCCTGCATTTGCCAAGCTCCAAAGACTCCC...TAGTCTGCCTGCCTGCCCGCCCGCCACGGAGCTGCCTGAGTGTCCCTGATCGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274811.9
3UTR TCA 72 bp GGAGGACTCGGAGCAGCTGCCGCGCCTCGAAGTCACTaGAGCAGACCACACACAGCGTCTGCTCCGACTGAT +
Preference number: 3 (lower is better)
Translates to: GGLGAAAAPRSH*SRPHTASAPTD
Trigger: ATCAGTCGGAGCAGACGCTGTGTGTGGTCTGCTTCAGTGACTTCGAGGCGCGGCAGCTGCTCCGAGTCCTCC
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513029.5
3UTR GCA 72 bp AGCATGAGACCTTCTGACCCAGGATGGTGCTCTGTCTaGCCATCCTGGGGCCAAGGATCTCCACCGGCCCCA +
Preference number: 3 (lower is better)
Translates to: SMRPSDPGWCSV*PSWGQGSPPAP
Trigger: TGGGGCCGGTGGAGATCCTTGGCCCCAGGATGGGCAGACAGAGCACCATCCTGGGTCAGAAGGTCTCATGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274811.9
3UTR GCA 72 bp ACAACAGAGGGAGAGGAGATTGGGCACGGGTCTGGCTaGATCCCTGGGAGGGACAACCACCGGGAACACAGG +
Preference number: 3 (lower is better)
Translates to: TTEGEEIGHGSG*IPGRDNHREHR
Trigger: CCTGTGTTCCCGGTGGTTGTCCCTCCCAGGGATGCAGCCAGACCCGTGCCCAATCTCCTCTCCCTCTGTTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274811.9
3UTR TCA 72 bp AATGCAGGGGCTTATTGCAGGGACTCCTCGCTGGGCTaGCCCTGGCACCAGCTCTGGAAATGCAGGCAGGAG +
Preference number: 3 (lower is better)
Translates to: NAGAYCRDSSLG*PWHQLWKCRQE
Trigger: CTCCTGCCTGCATTTCCAGAGCTGGTGCCAGGGTCAGCCCAGCGAGGAGTCCCTGCAATAAGCCCCTGCATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274811.9
3UTR TCA 72 bp GGCAGAGGGCACGCCATTTCAGAGCATGAGACCTTCTaGCCCAGGATGGTGCTCTGTCTGCCCATCCTGGGG +
Preference number: 3 (lower is better)
Translates to: GRGHAISEHETF*PRMVLCLPILG
Trigger: CCCCAGGATGGGCAGACAGAGCACCATCCTGGGTCAGAAGGTCTCATGCTCTGAAATGGCGTGCCCTCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274811.9
3UTR TCA 72 bp GTGCCACCTGGGCAGAGGGCACGCCATTTCAGAGCATaGGACCTTCTGACCCAGGATGGTGCTCTGTCTGCC +
Preference number: 3 (lower is better)
Translates to: VPPGQRARHFRA*DLLTQDGALSA
Trigger: GGCAGACAGAGCACCATCCTGGGTCAGAAGGTCTCATGCTCTGAAATGGCGTGCCCTCTGCCCAGGTGGCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274811.9
3UTR GCA 72 bp CGGGTTAAAGCGGTACGACGGGAGCTGCTCTATGTCTaGTTTGGTGAGACCCCGGGGCTTGGCATCTCCCAG +
Preference number: 3 (lower is better)
Translates to: RVKAVRRELLYV*FGETPGLGISQ
Trigger: CTGGGAGATGCCAAGCCCCGGGGTCTCACCAAAGCAGACATAGAGCAGCTCCCGTCGTACCGCTTTAACCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513029.5
3UTR GCA 72 bp TGGAACTCATGGTTGCAGGGGAGGACTCGGAGCAGCTaGCGCGCCTCGAAGTCACTGAAGCAGACCACACAC +
Preference number: 3 (lower is better)
Translates to: WNSWLQGRTRSS*RASKSLKQTTH
Trigger: GTGTGTGGTCTGCTTCAGTGACTTCGAGGCGCGGCAGCTGCTCCGAGTCCTCCCCTGCAACCATGAGTTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513029.5
3UTR CCA 72 bp TGGCAAATGCAGGGGCTTATTGCAGGGACTCCTCGCTaGGCTGACCCTGGCACCAGCTCTGGAAATGCAGGC +
Preference number: 3 (lower is better)
Translates to: WQMQGLIAGTPR*ADPGTSSGNAG
Trigger: GCCTGCATTTCCAGAGCTGGTGCCAGGGTCAGCCCAGCGAGGAGTCCCTGCAATAAGCCCCTGCATTTGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274811.9
3UTR CCA 72 bp GTGACACCGTCTGTCTACGCACCTGGCAGTGCCACCTaGGCAGAGGGCACGCCATTTCAGAGCATGAGACCT +
Preference number: 3 (lower is better)
Translates to: VTPSVYAPGSAT*AEGTPFQSMRP
Trigger: AGGTCTCATGCTCTGAAATGGCGTGCCCTCTGCCCAGGTGGCACTGCCAGGTGCGTAGACAGACGGTGTCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274811.9
3UTR TCA 72 bp TCACTGAAGCAGACCACACACAGCGTCTGCTCCGACTaGTGGCTGTCCGGGTTAAAGCGGTACGACGGGAGC +
Preference number: 3 (lower is better)
Translates to: SLKQTTHSVCSD*WLSGLKRYDGS
Trigger: GCTCCCGTCGTACCGCTTTAACCCGGACAGCCATCAGTCGGAGCAGACGCTGTGTGTGGTCTGCTTCAGTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513029.5
3UTR GCA 72 bp GGCAGACTAGGGAGGGAGTCTTTGGAGCTTGGCAAATaGAGGGGCTTATTGCAGGGACTCCTCGCTGGGCTG +
Preference number: 3 (lower is better)
Translates to: GRLGRESLELGK*RGLLQGLLAGL
Trigger: CAGCCCAGCGAGGAGTCCCTGCAATAAGCCCCTGCATTTGCCAAGCTCCAAAGACTCCCTCCCTAGTCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274811.9
3UTR CCA 72 bp GCAGGCAGGCAGACTAGGGAGGGAGTCTTTGGAGCTTaGCAAATGCAGGGGCTTATTGCAGGGACTCCTCGC +
Preference number: 3 (lower is better)
Translates to: AGRQTREGVFGA*QMQGLIAGTPR
Trigger: GCGAGGAGTCCCTGCAATAAGCCCCTGCATTTGCCAAGCTCCAAAGACTCCCTCCCTAGTCTGCCTGCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274811.9
3UTR CCA 72 bp CAAAACAACAGAGGGAGAGGAGATTGGGCACGGGTCTaGCTGCATCCCTGGGAGGGACAACCACCGGGAACA +
Preference number: 3 (lower is better)
Translates to: QNNRGRGDWARV*LHPWEGQPPGT
Trigger: TGTTCCCGGTGGTTGTCCCTCCCAGGGATGCAGCCAGACCCGTGCCCAATCTCCTCTCCCTCTGTTGTTTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274811.9
3UTR CCA 72 bp CCTGGAGTTATATACAGTAAGACTTTGGGTTCTCCATaGGGGTGGGACCAGGCTGACGGGCCCCACGGCAGG +
Preference number: 3 (lower is better)
Translates to: PGVIYSKTLGSP*GWDQADGPHGR
Trigger: CCTGCCGTGGGGCCCGTCAGCCTGGTCCCACCCCCATGGAGAACCCAAAGTCTTACTGTATATAACTCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274811.9
3UTR TCA 72 bp CAGGTCCAGGCTGATGGTGGGCCCCATTGCTGTTGGTaGCATTGGCAGCATCGAGAGGAAGTAGGGCAGGAA +
Preference number: 3 (lower is better)
Translates to: QVQADGGPHCCW*HWQHREEVGQE
Trigger: TTCCTGCCCTACTTCCTCTCGATGCTGCCAATGTCACCAACAGCAATGGGGCCCACCATCAGCCTGGACCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513029.5
3UTR TCA 72 bp TCTCCATCTCCACATCATCCACGTCCAGGTCCAGGCTaGTGGTGGGCCCCATTGCTGTTGGTGACATTGGCA +
Preference number: 3 (lower is better)
Translates to: SPSPHHPRPGPG*WWAPLLLVTLA
Trigger: TGCCAATGTCACCAACAGCAATGGGGCCCACCATCAGCCTGGACCTGGACGTGGATGATGTGGAGATGGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513029.5
3UTR GCA 72 bp GAAAAGCGTCGGGTCCCGGTAGGCTCTAGGGACGTGTaGAGTACAGTGCATGGCAGTTATCAGCTGAGCACA +
Preference number: 3 (lower is better)
Translates to: EKRRVPVGSRDV*STVHGSYQLST
Trigger: TGTGCTCAGCTGATAACTGCCATGCACTGTACTGCACACGTCCCTAGAGCCTACCGGGACCCGACGCTTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274811.9
3UTR CCA 72 bp ACGCCATTTCAGAGCATGAGACCTTCTGACCCAGGATaGTGCTCTGTCTGCCCATCCTGGGGCCAAGGATCT +
Preference number: 3 (lower is better)
Translates to: TPFQSMRPSDPG*CSVCPSWGQGS
Trigger: AGATCCTTGGCCCCAGGATGGGCAGACAGAGCACCATCCTGGGTCAGAAGGTCTCATGCTCTGAAATGGCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274811.9
3UTR-3UTR CAA 90 bp CCCCTGGGCACTCGGTCCCAGTTGGTCCCTATACCCGCCCCTATTAAACCAAAAATCCTACACGTGATTTaGGGCCAAATGAATGAACAA +
Preference number: 3 (lower is better)
Translates to: PLGTRSQLVPIPAPIKPKILHVI*GQMNEQ
Trigger: TTGTTCATTCATTTGGCCCAAAATCACGTGTAGGAT...TTTTGGTTTAATAGGGGCGGGTATAGGGACCAACTGGGACCGAGTGCCCAGGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000274811.9
3UTR-3UTR CAA 90 bp CAGAAGTTGGTAAATAAGAGAGTAAACAATGGCAAGCCCCCACCACAGGAAATCCTAGGGAGGGAGTCTTaGGAGCTTGGCAAATGCAGG +
Preference number: 3 (lower is better)
Translates to: QKLVNKRVNNGKPPPQEILGRES*ELGKCR
Trigger: CCTGCATTTGCCAAGCTCCAAAGACTCCCTCCCTAG...GATTTCCTGTGGTGGGGGCTTGCCATTGTTTACTCTCTTATTTACCAACTTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000274811.9
3UTR-3UTR CAA 90 bp CAGAAGTTGGTAAATAAGAGAGTAAACAATGGCAAGCCCCCACCACAGGAAATCCCCAATAGCTGCTTGTaGGAATCACTGCTGCAGCCG +
Preference number: 3 (lower is better)
Translates to: QKLVNKRVNNGKPPPQEIPNSCL*ESLLQP
Trigger: CGGCTGCAGCAGTGATTCCAACAAGCAGCTATTGGG...GATTTCCTGTGGTGGGGGCTTGCCATTGTTTACTCTCTTATTTACCAACTTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000274811.9
3UTR GCA 72 bp GGGTGGTTCTGTGTAAAACACGTGGGTTTTCAACACTaGTATAAATATAGAAACGTCACCTGGAGTTATATA +
Preference number: 3 (lower is better)
Translates to: GWFCVKHVGFQH*YKYRNVTWSYI
Trigger: TATATAACTCCAGGTGACGTTTCTATATTTATAGCAGTGTTGAAAACCCACGTGTTTTACACAGAACCACCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274811.9
CDS-3UTR CCA 90 bp CTCAGCCTCCCTGGGCACCTCGGAGGCGTCGGCCCGGCAGATGGGACACGTCCGGGGCGGCGGGGGCAGTaGCTGCTGCAGGCGGTATCT +
Preference number: 4 (lower is better)
Translates to: LSLPGHLGGVGPADGTRPGRRGQ*LLQAVS
Trigger: AGATACCGCCTGCAGCAGCCACTGCCCCCGCCGCCC...CGGACGTGTCCCATCTGCCGGGCCGACGCCTCCGAGGTGCCCAGGGAGGCTGAG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000506378.1
ENST00000513029.5
CDS-3UTR TCA 90 bp CGCAGGTCCACGTCGTTGTCGAGCCGCTGGAGGGGCATCCGAGGGTGCTGGGTCGCTGCAGCACCGCGCTaGCATCATGGCCCGGCCGCC +
Preference number: 4 (lower is better)
Translates to: RRSTSLSSRWRGIRGCWVAAAPR*HHGPAA
Trigger: GGCGGCCGGGCCATGATGTCAGCGCGGTGCTGCAGC...GACCCAGCACCCTCGGATGCCCCTCCAGCGGCTCGACAACGACGTGGACCTGCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513029.5
CDS-3UTR CCA 90 bp CTCAGCCTCCCTGGGCACCTCGGAGGCGTCGGCCCGGCAGATGGGACACGTCCGCGTCGGCCCGGCAGATaGGACACGTCCGGTTGGCCT +
Preference number: 4 (lower is better)
Translates to: LSLPGHLGGVGPADGTRPRRPGR*DTSGWP
Trigger: AGGCCAACCGGACGTGTCCCATCTGCCGGGCCGACG...CGGACGTGTCCCATCTGCCGGGCCGACGCCTCCGAGGTGCCCAGGGAGGCTGAG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506378.1
ENST00000513029.5
CDS-3UTR CCA 90 bp CTCACTCAGCCTCCCTGGGCACCTCGGAGGCGTCGGCCCGGCAGATGGGACACGGGGCAGGCGGCTGCGTaGCCTCACTCAGCCTCCCTG +
Preference number: 4 (lower is better)
Translates to: LTQPPWAPRRRRPGRWDTGQAAA*PHSASL
Trigger: CAGGGAGGCTGAGTGAGGCCACGCAGCCGCCTGCCC...CGTGTCCCATCTGCCGGGCCGACGCCTCCGAGGTGCCCAGGGAGGCTGAGTGAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506378.1
ENST00000513029.5
3UTR CAA 72 bp CCCAGGGAGGGCTGGTCCCCACGCAGGTCCACGTCGTaGTCGAGCCGCTGGAGGGGCATCCGAGGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: PREGWSPRRSTS*SSRWRGIRGCW
Trigger: CCAGCACCCTCGGATGCCCCTCCAGCGGCTCGACAACGACGTGGACCTGCGTGGGGACCAGCCCTCCCTGGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513029.5
CDS-3UTR TCA 90 bp CAGCCTCCCTGGGCACCTCGGAGGCGTCGGCCCGGCAGATGGGACACGTCCGGTCGTCCAGGTCCAGGCTaGTGGTGGGCCCCATTGCTG +
Preference number: 4 (lower is better)
Translates to: QPPWAPRRRRPGRWDTSGRPGPG*WWAPLL
Trigger: CAGCAATGGGGCCCACCATCAGCCTGGACCTGGACG...ACCGGACGTGTCCCATCTGCCGGGCCGACGCCTCCGAGGTGCCCAGGGAGGCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506378.1
ENST00000513029.5
CDS-3UTR TCA 90 bp GCTAGGATGTGCCGGCCCCACACGCAGTTCGTTCAGGGCAGCAACCCCAGCTGGGCAGGCCGGCCAGCATaGCCGTGCTCGGCCCCCTGG +
Preference number: 4 (lower is better)
Translates to: ARMCRPHTQFVQGSNPSWAGRPA*PCSAPW
Trigger: CCAGGGGGCCGAGCACGGTCATGCTGGCCGGCCTGC...CCAGCTGGGGTTGCTGCCCTGAACGAACTGCGTGTGGGGCCGGCACATCCTAGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000274811.9
CDS-3UTR CCA 90 bp CTCTGCTGGGTGGCTGGGTGCAGCATTCGGGGGCTCCCGCCGGCAGGAGCCGAGTGCATGGTGCACGCCTaGATAAGCGGGGGCGGGAGG +
Preference number: 4 (lower is better)
Translates to: LCWVAGCSIRGLPPAGAECMVHA*ISGGGR
Trigger: CCTCCCGCCCCCGCTTATCCAGGCGTGCACCATGCA...CTCGGCTCCTGCCGGCGGGAGCCCCCGAATGCTGCACCCAGCCACCCAGCAGAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000504160.1
ENST00000513029.5
CDS-3UTR CCA 90 bp CACTCAGGCAGCTCCGTGGCGGGCGGGCAGGCAGGCAGACTAGGGAGGGAGTCTGGGCAGGCGGCTGCGTaGCCTCACTCAGCCTCCCTG +
Preference number: 4 (lower is better)
Translates to: HSGSSVAGGQAGRLGRESGQAAA*PHSASL
Trigger: CAGGGAGGCTGAGTGAGGCCACGCAGCCGCCTGCCC...AGACTCCCTCCCTAGTCTGCCTGCCTGCCCGCCCGCCACGGAGCTGCCTGAGTG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274811.9
CDS-3UTR GCA 90 bp GCTCTGCTGGGTGGCTGGGTGCAGCATTCGGGGGCTCCCGCCGGCAGGAGCCGACTGCAGCCAGGGATGTaGTGGCCTGTAGGCAAGGGG +
Preference number: 4 (lower is better)
Translates to: ALLGGWVQHSGAPAGRSRLQPGM*WPVGKG
Trigger: CCCCTTGCCTACAGGCCAGCACATCCCTGGCTGCAG...TCGGCTCCTGCCGGCGGGAGCCCCCGAATGCTGCACCCAGCCACCCAGCAGAGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000504160.1
ENST00000513029.5
CDS-3UTR GCA 90 bp CACTCAGGCAGCTCCGTGGCGGGCGGGCAGGCAGGCAGACTAGGGAGGGAGTCTGGCGGGGGCAGTGGCTaGTGCAGGCGGTATCTCTGG +
Preference number: 4 (lower is better)
Translates to: HSGSSVAGGQAGRLGRESGGGSG*CRRYLW
Trigger: CCAGAGATACCGCCTGCAGCAGCCACTGCCCCCGCC...AGACTCCCTCCCTAGTCTGCCTGCCTGCCCGCCCGCCACGGAGCTGCCTGAGTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000274811.9
CDS-3UTR CCA 90 bp CTCACTCAGCCTCCCTGGGCACCTCGGAGGCGTCGGCCCGGCAGATGGGACACGTCGTTGTCGAGCCGCTaGAGGGGCATCCGAGGGTGC +
Preference number: 4 (lower is better)
Translates to: LTQPPWAPRRRRPGRWDTSLSSR*RGIRGC
Trigger: GCACCCTCGGATGCCCCTCCAGCGGCTCGACAACGA...CGTGTCCCATCTGCCGGGCCGACGCCTCCGAGGTGCCCAGGGAGGCTGAGTGAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513029.5
CDS-3UTR CCA 90 bp CCCGATCAGGGACACTCAGGCAGCTCCGTGGCGGGCGGGCAGGCAGGCAGACTAGCAGGGACTCCTCGCTaGGCTGACCCTGGCACCAGC +
Preference number: 4 (lower is better)
Translates to: PDQGHSGSSVAGGQAGRLAGTPR*ADPGTS
Trigger: GCTGGTGCCAGGGTCAGCCCAGCGAGGAGTCCCTGC...TAGTCTGCCTGCCTGCCCGCCCGCCACGGAGCTGCCTGAGTGTCCCTGATCGGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274811.9
CDS-3UTR CCA 90 bp CTCAGCCTCCCTGGGCACCTCGGAGGCGTCGGCCCGGCAGATGGGACACGTCCGATCTGTGCAGCCACCTaGGGGGACTTGGTCCGCTGG +
Preference number: 4 (lower is better)
Translates to: LSLPGHLGGVGPADGTRPICAAT*GDLVRW
Trigger: CCAGCGGACCAAGTCCCCCCAGGTGGCTGCACAGAT...CGGACGTGTCCCATCTGCCGGGCCGACGCCTCCGAGGTGCCCAGGGAGGCTGAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000506378.1
CDS-3UTR TCA 90 bp CCTGGGCACCTCGGAGGCGTCGGCCCGGCAGATGGGACACGTCCGGTTGGCCTGGCGCCTCGAAGTCACTaGAGCAGACCACACACAGCG +
Preference number: 4 (lower is better)
Translates to: PGHLGGVGPADGTRPVGLAPRSH*SRPHTA
Trigger: CGCTGTGTGTGGTCTGCTTCAGTGACTTCGAGGCGC...CAGGCCAACCGGACGTGTCCCATCTGCCGGGCCGACGCCTCCGAGGTGCCCAGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506378.1
CDS-3UTR TCA 90 bp AGCCTCCCTGGGCACCTCGGAGGCGTCGGCCCGGCAGATGGGACACGTCCGGTTCCACCTTCCCGGAGATaGCGTCACCCCCAAGAGCTG +
Preference number: 4 (lower is better)
Translates to: SLPGHLGGVGPADGTRPVPPSRR*RHPQEL
Trigger: CAGCTCTTGGGGGTGACGTCATCTCCGGGAAGGTGG...AACCGGACGTGTCCCATCTGCCGGGCCGACGCCTCCGAGGTGCCCAGGGAGGCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000513029.5
CDS-3UTR GCA 90 bp GCTCTGCTGGGTGGCTGGGTGCAGCATTCGGGGGCTCCCGCCGGCAGGAGCCGAGGGACAGGTCCCTGGTaGACCTGCTCGTGGAGATCA +
Preference number: 4 (lower is better)
Translates to: ALLGGWVQHSGAPAGRSRGTGPW*TCSWRS
Trigger: TGATCTCCACGAGCAGGTGCACCAGGGACCTGTCCC...TCGGCTCCTGCCGGCGGGAGCCCCCGAATGCTGCACCCAGCCACCCAGCAGAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000504160.1
ENST00000513029.5
CDS-3UTR GCA 90 bp CTCTGCTGGGTGGCTGGGTGCAGCATTCGGGGGCTCCCGCCGGCAGGAGCCGAGGGCACAGGCAGCTGCTaGATGGTGCACGCCTGGATA +
Preference number: 4 (lower is better)
Translates to: LCWVAGCSIRGLPPAGAEGTGSC*MVHAWI
Trigger: TATCCAGGCGTGCACCATGCAGCAGCTGCCTGTGCC...CTCGGCTCCTGCCGGCGGGAGCCCCCGAATGCTGCACCCAGCCACCCAGCAGAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000504160.1
ENST00000513029.5
CDS-3UTR GCA 90 bp GCTCTGCTGGGTGGCTGGGTGCAGCATTCGGGGGCTCCCGCCGGCAGGAGCCGATGCAGAGACACAAACTaGCCCAGGGGCGCCATGTGG +
Preference number: 4 (lower is better)
Translates to: ALLGGWVQHSGAPAGRSRCRDTN*PRGAMW
Trigger: CCACATGGCGCCCCTGGGGCAGTTTGTGTCTCTGCA...TCGGCTCCTGCCGGCGGGAGCCCCCGAATGCTGCACCCAGCCACCCAGCAGAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000513029.5
CDS-3UTR GCA 90 bp TCGGAGGCGTCGGCCCGGCAGATGGGACACGTCCGGTTGGCCTGTGGGAACATGGGCGGGGGCAGTGGCTaGTGCAGGCGGTATCTCTGG +
Preference number: 4 (lower is better)
Translates to: SEASARQMGHVRLACGNMGGGSG*CRRYLW
Trigger: CCAGAGATACCGCCTGCAGCAGCCACTGCCCCCGCC...CATGTTCCCACAGGCCAACCGGACGTGTCCCATCTGCCGGGCCGACGCCTCCGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000506378.1
CDS-3UTR GCA 90 bp CAGCCTCCCTGGGCACCTCGGAGGCGTCGGCCCGGCAGATGGGACACGTCCGGTATGCACGTCAGGCGTTaGTCTCACCAGCCCCAACCC +
Preference number: 4 (lower is better)
Translates to: QPPWAPRRRRPGRWDTSGMHVRR*SHQPQP
Trigger: GGGTTGGGGCTGGTGAGAGCAACGCCTGACGTGCAT...ACCGGACGTGTCCCATCTGCCGGGCCGACGCCTCCGAGGTGCCCAGGGAGGCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506378.1
CDS-3UTR CCA 90 bp GGCAGCTGCTGCATGGTGCACGCCTGGATAAGCGGGGGCGGGAGGCAGCAGAGGGCGGCAGCCGGCGGCTaGCCCTTTAAGAACTGTCCG +
Preference number: 4 (lower is better)
Translates to: GSCCMVHAWISGGGRQQRAAAGG*PFKNCP
Trigger: CGGACAGTTCTTAAAGGGCCAGCCGCCGGCTGCCGC...CCTCTGCTGCCTCCCGCCCCCGCTTATCCAGGCGTGCACCATGCAGCAGCTGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000504160.1
CDS-3UTR CCA 90 bp CTCCCTGGGCACCTCGGAGGCGTCGGCCCGGCAGATGGGACACGTCCGGTTGGCAGAGGGACAGGTCCCTaGTGCACCTGCTCGTGGAGA +
Preference number: 4 (lower is better)
Translates to: LPGHLGGVGPADGTRPVGRGTGP*CTCSWR
Trigger: TCTCCACGAGCAGGTGCACCAGGGACCTGTCCCTCT...GCCAACCGGACGTGTCCCATCTGCCGGGCCGACGCCTCCGAGGTGCCCAGGGAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513029.5
CDS-3UTR CCA 90 bp CCCGATCAGGGACACTCAGGCAGCTCCGTGGCGGGCGGGCAGGCAGGCAGACTATGCATGGTGCACGCCTaGATAAGCGGGGGCGGGAGG +
Preference number: 4 (lower is better)
Translates to: PDQGHSGSSVAGGQAGRLCMVHA*ISGGGR
Trigger: CCTCCCGCCCCCGCTTATCCAGGCGTGCACCATGCA...TAGTCTGCCTGCCTGCCCGCCCGCCACGGAGCTGCCTGAGTGTCCCTGATCGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000274811.9
CDS-3UTR CCA 90 bp AGCCTCCCTGGGCACCTCGGAGGCGTCGGCCCGGCAGATGGGACACGTCCGGTTCCAAAGGACAGCTCCTaGTGCAGCGGATCGTGGGGC +
Preference number: 4 (lower is better)
Translates to: SLPGHLGGVGPADGTRPVPKDSS*CSGSWG
Trigger: GCCCCACGATCCGCTGCACCAGGAGCTGTCCTTTGG...AACCGGACGTGTCCCATCTGCCGGGCCGACGCCTCCGAGGTGCCCAGGGAGGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506378.1
ENST00000513029.5
CDS-3UTR CCA 90 bp CTCCCTGGGCACCTCGGAGGCGTCGGCCCGGCAGATGGGACACGTCCGGTTGGCTGCAGGCGGTATCTCTaGGTGCTCAGTCTCCGTGGC +
Preference number: 4 (lower is better)
Translates to: LPGHLGGVGPADGTRPVGCRRYL*VLSLRG
Trigger: GCCACGGAGACTGAGCACCCAGAGATACCGCCTGCA...GCCAACCGGACGTGTCCCATCTGCCGGGCCGACGCCTCCGAGGTGCCCAGGGAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506378.1
ENST00000513029.5
CDS-3UTR CCA 90 bp GAGGCGTCGGCCCGGCAGATGGGACACGTCCGGTTGGCCTGTGGGAACATGCACCTCACTCAGCCTCCCTaGGCACCTCGGAGGCGTCGG +
Preference number: 4 (lower is better)
Translates to: EASARQMGHVRLACGNMHLTQPP*APRRRR
Trigger: CCGACGCCTCCGAGGTGCCCAGGGAGGCTGAGTGAG...GTGCATGTTCCCACAGGCCAACCGGACGTGTCCCATCTGCCGGGCCGACGCCTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506378.1
CDS-3UTR CCA 90 bp GCTAGGATGTGCCGGCCCCACACGCAGTTCGTTCAGGGCAGCAACCCCAGCTGGCCGTGCTCGGCCCCCTaGGCACTCGGTCCCAGTTGG +
Preference number: 4 (lower is better)
Translates to: ARMCRPHTQFVQGSNPSWPCSAP*ALGPSW
Trigger: CCAACTGGGACCGAGTGCCCAGGGGGCCGAGCACGG...CCAGCTGGGGTTGCTGCCCTGAACGAACTGCGTGTGGGGCCGGCACATCCTAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000274811.9
CDS-3UTR CCA 90 bp CTCACTCAGCCTCCCTGGGCACCTCGGAGGCGTCGGCCCGGCAGATGGGACACGCGTCCGGTTGGCCTGTaGGAACATGCACGTCAGGCG +
Preference number: 4 (lower is better)
Translates to: LTQPPWAPRRRRPGRWDTRPVGL*EHARQA
Trigger: CGCCTGACGTGCATGTTCCCACAGGCCAACCGGACG...CGTGTCCCATCTGCCGGGCCGACGCCTCCGAGGTGCCCAGGGAGGCTGAGTGAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506378.1
CDS-3UTR TCA 90 bp CTCAGCCTCCCTGGGCACCTCGGAGGCGTCGGCCCGGCAGATGGGACACGTCCGCTATGTCTGCTTTGGTaGGACCCCGGGGCTTGGCAT +
Preference number: 4 (lower is better)
Translates to: LSLPGHLGGVGPADGTRPLCLLW*DPGAWH
Trigger: ATGCCAAGCCCCGGGGTCTCACCAAAGCAGACATAG...CGGACGTGTCCCATCTGCCGGGCCGACGCCTCCGAGGTGCCCAGGGAGGCTGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000506378.1
ENST00000513029.5
CDS-3UTR GCA 90 bp CTCTGCTGGGTGGCTGGGTGCAGCATTCGGGGGCTCCCGCCGGCAGGAGCCGAGTGGCCACCTAGTCACTaGCAGAGCCCATGGTCGCAT +
Preference number: 4 (lower is better)
Translates to: LCWVAGCSIRGLPPAGAEWPPSH*QSPWSH
Trigger: ATGCGACCATGGGCTCTGGCAGTGACTAGGTGGCCA...CTCGGCTCCTGCCGGCGGGAGCCCCCGAATGCTGCACCCAGCCACCCAGCAGAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000504160.1
ENST00000513029.5
CDS-3UTR GCA 90 bp GGCAGCTGCTGCATGGTGCACGCCTGGATAAGCGGGGGCGGGAGGCAGCAGAGGACCATGAACGGGCTCTaGTGGGTGGCTGGGTGCAGC +
Preference number: 4 (lower is better)
Translates to: GSCCMVHAWISGGGRQQRTMNGL*WVAGCS
Trigger: GCTGCACCCAGCCACCCAGCAGAGCCCGTTCATGGT...CCTCTGCTGCCTCCCGCCCCCGCTTATCCAGGCGTGCACCATGCAGCAGCTGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000504160.1
ENST00000513029.5
CDS-3UTR GCA 90 bp GCTCTGCTGGGTGGCTGGGTGCAGCATTCGGGGGCTCCCGCCGGCAGGAGCCGAGGTCCCTGGTGCACCTaGTCGTGGAGATCAACCATG +
Preference number: 4 (lower is better)
Translates to: ALLGGWVQHSGAPAGRSRGPWCT*SWRSTM
Trigger: CATGGTTGATCTCCACGAGCAGGTGCACCAGGGACC...TCGGCTCCTGCCGGCGGGAGCCCCCGAATGCTGCACCCAGCCACCCAGCAGAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000504160.1
ENST00000513029.5
CDS-3UTR GCA 90 bp AGCCTCCCTGGGCACCTCGGAGGCGTCGGCCCGGCAGATGGGACACGTCCGGTTAGGGGCATCCGAGGGTaGTGGGTCTGCAGAGACACA +
Preference number: 4 (lower is better)
Translates to: SLPGHLGGVGPADGTRPVRGIRG*WVCRDT
Trigger: TGTGTCTCTGCAGACCCAGCACCCTCGGATGCCCCT...AACCGGACGTGTCCCATCTGCCGGGCCGACGCCTCCGAGGTGCCCAGGGAGGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513029.5
CDS-3UTR GCA 90 bp CACCTCGGAGGCGTCGGCCCGGCAGATGGGACACGTCCGGTTGGCCTGTGGGAAAAGGACAGCTCCTGGTaGAGCGGATCGTGGGGCAGG +
Preference number: 4 (lower is better)
Translates to: HLGGVGPADGTRPVGLWEKDSSW*SGSWGR
Trigger: CCTGCCCCACGATCCGCTGCACCAGGAGCTGTCCTT...TTCCCACAGGCCAACCGGACGTGTCCCATCTGCCGGGCCGACGCCTCCGAGGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506378.1
CDS-3UTR CCA 90 bp CGGGAACACAGGGCTCCCTCTCCCCGTATGGCCCAAGCCCCTCAGGATACGTGTGCAGAGAATCGCCGCTaGCCCACGGGGGCGGAGGGT +
Preference number: 4 (lower is better)
Translates to: REHRAPSPRMAQAPQDTCAENRR*PTGAEG
Trigger: ACCCTCCGCCCCCGTGGGCCAGCGGCGATTCTCTGC...ACACGTATCCTGAGGGGCTTGGGCCATACGGGGAGAGGGAGCCCTGTGTTCCCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000274811.9
CDS-3UTR CCA 90 bp TTTGGTGAGACCCCGGGGCTTGGCATCTCCCAGCCGCTCGGCCAGGTTCAGGAGCTCTACGGGGAGGTGTaGAGGTCGGGACGGCGGCTG +
Preference number: 4 (lower is better)
Translates to: FGETPGLGISQPLGQVQELYGEV*RSGRRL
Trigger: CAGCCGCCGTCCCGACCTCCACACCTCCCCGTAGAG...CTCCTGAACCTGGCCGAGCGGCTGGGAGATGCCAAGCCCCGGGGTCTCACCAAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000513029.5
CDS-3UTR CCA 90 bp CGGGAACACAGGGCTCCCTCTCCCCGTATGGCCCAAGCCCCTCAGGATACGTGTGGGCGGCGGGGGCAGTaGCTGCTGCAGGCGGTATCT +
Preference number: 4 (lower is better)
Translates to: REHRAPSPRMAQAPQDTCGRRGQ*LLQAVS
Trigger: AGATACCGCCTGCAGCAGCCACTGCCCCCGCCGCCC...ACACGTATCCTGAGGGGCTTGGGCCATACGGGGAGAGGGAGCCCTGTGTTCCCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000274811.9
CDS-3UTR CCA 90 bp TTTGGTGAGACCCCGGGGCTTGGCATCTCCCAGCCGCTCGGCCAGGTTCAGGAGCGTCGGCCCGGCAGATaGGACACGTCCGGTTGGCCT +
Preference number: 4 (lower is better)
Translates to: FGETPGLGISQPLGQVQERRPGR*DTSGWP
Trigger: AGGCCAACCGGACGTGTCCCATCTGCCGGGCCGACG...CTCCTGAACCTGGCCGAGCGGCTGGGAGATGCCAAGCCCCGGGGTCTCACCAAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513029.5
CDS-3UTR CCA 90 bp GCTAGGATGTGCCGGCCCCACACGCAGTTCGTTCAGGGCAGCAACCCCAGCTGGCTCACTCAGCCTCCCTaGGCACCTCGGAGGCGTCGG +
Preference number: 4 (lower is better)
Translates to: ARMCRPHTQFVQGSNPSWLTQPP*APRRRR
Trigger: CCGACGCCTCCGAGGTGCCCAGGGAGGCTGAGTGAG...CCAGCTGGGGTTGCTGCCCTGAACGAACTGCGTGTGGGGCCGGCACATCCTAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274811.9
CDS-3UTR CCA 90 bp CACTCAGGCAGCTCCGTGGCGGGCGGGCAGGCAGGCAGACTAGGGAGGGAGTCTCCTGGCAGTGCCACCTaGGCAGAGGGCACGCCATTT +
Preference number: 4 (lower is better)
Translates to: HSGSSVAGGQAGRLGRESPGSAT*AEGTPF
Trigger: AAATGGCGTGCCCTCTGCCCAGGTGGCACTGCCAGG...AGACTCCCTCCCTAGTCTGCCTGCCTGCCCGCCCGCCACGGAGCTGCCTGAGTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274811.9
CDS-3UTR TCA 90 bp CCCGATCAGGGACACTCAGGCAGCTCCGTGGCGGGCGGGCAGGCAGGCAGACTAGGGTCGTCACTGTGGTaGCCGTGTAGGACAGAGGGA +
Preference number: 4 (lower is better)
Translates to: PDQGHSGSSVAGGQAGRLGSSLW*PCRTEG
Trigger: TCCCTCTGTCCTACACGGTCACCACAGTGACGACCC...TAGTCTGCCTGCCTGCCCGCCCGCCACGGAGCTGCCTGAGTGTCCCTGATCGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274811.9
CDS-3UTR TCA 90 bp CCCGATCAGGGACACTCAGGCAGCTCCGTGGCGGGCGGGCAGGCAGGCAGACTAGGAAAAGGAGGGACCTaGGGGTGCACAGGAGGGAGA +
Preference number: 4 (lower is better)
Translates to: PDQGHSGSSVAGGQAGRLGKGGT*GCTGGR
Trigger: TCTCCCTCCTGTGCACCCTCAGGTCCCTCCTTTTCC...TAGTCTGCCTGCCTGCCCGCCCGCCACGGAGCTGCCTGAGTGTCCCTGATCGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274811.9
CDS-3UTR GCA 90 bp CAGAGGGAGAGGAGATTGGGCACGGGTCTGGCTGCATCCCTGGGAGGGACAACCAGAGCTGGCCCGGGGTaGTGCCAGGTCCCGCAGAGA +
Preference number: 4 (lower is better)
Translates to: QRERRLGTGLAASLGGTTRAGPG*CQVPQR
Trigger: TCTCTGCGGGACCTGGCAGCACCCCGGGCCAGCTCT...GGTTGTCCCTCCCAGGGATGCAGCCAGACCCGTGCCCAATCTCCTCTCCCTCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274811.9
CDS-3UTR GCA 90 bp CAGAGGGAGAGGAGATTGGGCACGGGTCTGGCTGCATCCCTGGGAGGGACAACCGGTCGGGACGGCGGCTaGTGGGAGGGTAAGCGCTCA +
Preference number: 4 (lower is better)
Translates to: QRERRLGTGLAASLGGTTGRDGG*WEGKRS
Trigger: TGAGCGCTTACCCTCCCAGCAGCCGCCGTCCCGACC...GGTTGTCCCTCCCAGGGATGCAGCCAGACCCGTGCCCAATCTCCTCTCCCTCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274811.9
CDS-3UTR GCA 90 bp CACTCAGGCAGCTCCGTGGCGGGCGGGCAGGCAGGCAGACTAGGGAGGGAGTCTGGCACAGGCAGCTGCTaGATGGTGCACGCCTGGATA +
Preference number: 4 (lower is better)
Translates to: HSGSSVAGGQAGRLGRESGTGSC*MVHAWI
Trigger: TATCCAGGCGTGCACCATGCAGCAGCTGCCTGTGCC...AGACTCCCTCCCTAGTCTGCCTGCCTGCCCGCCCGCCACGGAGCTGCCTGAGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274811.9
CDS-3UTR GCA 90 bp GTCGAGCCGCTGGAGGGGCATCCGAGGGTGCTGGGTCTGCAGAGACACAAACTGGGCGGGGGCAGTGGCTaGTGCAGGCGGTATCTCTGG +
Preference number: 4 (lower is better)
Translates to: VEPLEGHPRVLGLQRHKLGGGSG*CRRYLW
Trigger: CCAGAGATACCGCCTGCAGCAGCCACTGCCCCCGCC...CAGTTTGTGTCTCTGCAGACCCAGCACCCTCGGATGCCCCTCCAGCGGCTCGAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000513029.5
CDS-3UTR GCA 90 bp CAGCCTCCCTGGGCACCTCGGAGGCGTCGGCCCGGCAGATGGGACACGTCCGGTCGGTACGACGGGAGCTaGTCTATGTCTGCTTTGGTG +
Preference number: 4 (lower is better)
Translates to: QPPWAPRRRRPGRWDTSGRYDGS*SMSALV
Trigger: CACCAAAGCAGACATAGAGCAGCTCCCGTCGTACCG...ACCGGACGTGTCCCATCTGCCGGGCCGACGCCTCCGAGGTGCCCAGGGAGGCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506378.1
ENST00000513029.5
CDS-3UTR GCA 90 bp GAGGCGTCGGCCCGGCAGATGGGACACGTCCGGTTGGCCTGTGGGAACATGCACAGGACTCGGAGCAGCTaGCGCGCCTCGAAGTCACTG +
Preference number: 4 (lower is better)
Translates to: EASARQMGHVRLACGNMHRTRSS*RASKSL
Trigger: CAGTGACTTCGAGGCGCGGCAGCTGCTCCGAGTCCT...GTGCATGTTCCCACAGGCCAACCGGACGTGTCCCATCTGCCGGGCCGACGCCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506378.1
CDS-3UTR GCA 90 bp CCCGATCAGGGACACTCAGGCAGCTCCGTGGCGGGCGGGCAGGCAGGCAGACTACACCAGCTCTGGAAATaGAGGCAGGAGCGAAGGGGC +
Preference number: 4 (lower is better)
Translates to: PDQGHSGSSVAGGQAGRLHQLWK*RQERRG
Trigger: GCCCCTTCGCTCCTGCCTGCATTTCCAGAGCTGGTG...TAGTCTGCCTGCCTGCCCGCCCGCCACGGAGCTGCCTGAGTGTCCCTGATCGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274811.9
CDS-3UTR GCA 90 bp AGCATGACCGTGCTCGGCCCCCTGGGCACTCGGTCCCAGTTGGTCCCTATACCCAGCCCGGCACACGCATaGATGCAGGCCGGCCAGCAT +
Preference number: 4 (lower is better)
Translates to: SMTVLGPLGTRSQLVPIPSPAHA*MQAGQH
Trigger: ATGCTGGCCGGCCTGCATGCATGCGTGTGCCGGGCT...GGGTATAGGGACCAACTGGGACCGAGTGCCCAGGGGGCCGAGCACGGTCATGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000274811.9
CDS-3UTR GCA 90 bp CTGGGCACCTCGGAGGCGTCGGCCCGGCAGATGGGACACGTCCGGTTGGCCTGTTGGCCTGTGGGAACATaGACGTCAGGCGTTGCTCTC +
Preference number: 4 (lower is better)
Translates to: LGTSEASARQMGHVRLACWPVGT*TSGVAL
Trigger: GAGAGCAACGCCTGACGTGCATGTTCCCACAGGCCA...ACAGGCCAACCGGACGTGTCCCATCTGCCGGGCCGACGCCTCCGAGGTGCCCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506378.1
CDS-3UTR CCA 90 bp AGGATGTGCCGGCCCCACACGCAGTTCGTTCAGGGCAGCAACCCCAGCTGGGTACACGGGGGCGGAGGGTaGCCACCTAGTCACTGCCAG +
Preference number: 4 (lower is better)
Translates to: RMCRPHTQFVQGSNPSWVHGGGG*PPSHCQ
Trigger: CTGGCAGTGACTAGGTGGCCACCCTCCGCCCCCGTG...TACCCAGCTGGGGTTGCTGCCCTGAACGAACTGCGTGTGGGGCCGGCACATCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000274811.9
CDS-3UTR CCA 90 bp CGGGAACACAGGGCTCCCTCTCCCCGTATGGCCCAAGCCCCTCAGGATACGTGTCTCTACGGGGAGGTGTaGAGGTCGGGACGGCGGCTG +
Preference number: 4 (lower is better)
Translates to: REHRAPSPRMAQAPQDTCLYGEV*RSGRRL
Trigger: CAGCCGCCGTCCCGACCTCCACACCTCCCCGTAGAG...ACACGTATCCTGAGGGGCTTGGGCCATACGGGGAGAGGGAGCCCTGTGTTCCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000274811.9
CDS-3UTR CCA 90 bp GGCCTGATAGGGCACAGGCAGCTGCTGCATGGTGCACGCCTGGATAAGCGGGGGACGGGCTCTGCTGGGTaGCTGGGTGCAGCATTCGGG +
Preference number: 4 (lower is better)
Translates to: GLIGHRQLLHGARLDKRGTGSAG*LGAAFG
Trigger: CCCGAATGCTGCACCCAGCCACCCAGCAGAGCCCGT...CCCCCGCTTATCCAGGCGTGCACCATGCAGCAGCTGCCTGTGCCCTATCAGGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000504160.1
ENST00000513029.5
CDS-3UTR CCA 90 bp TCGGAGGCGTCGGCCCGGCAGATGGGACACGTCCGGTTGGCCTTCAACCACTTGACGGGCTCTGCTGGGTaGCTGGGTGCAGCATTCGGG +
Preference number: 4 (lower is better)
Translates to: SEASARQMGHVRLAFNHLTGSAG*LGAAFG
Trigger: CCCGAATGCTGCACCCAGCCACCCAGCAGAGCCCGT...CAAGTGGTTGAAGGCCAACCGGACGTGTCCCATCTGCCGGGCCGACGCCTCCGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513029.5
CDS-3UTR CCA 90 bp GCTTGGCAAATGCAGGGGCTTATTGCAGGGACTCCTCGCTGGGCTGACCCTGGCACTCAGGCAGCTCCGTaGCGGGCGGGCAGGCAGGCA +
Preference number: 4 (lower is better)
Translates to: AWQMQGLIAGTPRWADPGTQAAP*RAGRQA
Trigger: TGCCTGCCTGCCCGCCCGCCACGGAGCTGCCTGAGT...GCCAGGGTCAGCCCAGCGAGGAGTCCCTGCAATAAGCCCCTGCATTTGCCAAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274811.9
CDS-3UTR CCA 90 bp AGCATGACCGTGCTCGGCCCCCTGGGCACTCGGTCCCAGTTGGTCCCTATACCCGAGGGAGCGGACCCCTaGCACTCAGTGCCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: SMTVLGPLGTRSQLVPIPEGADP*HSVPAG
Trigger: TCCTGCTGGCACTGAGTGCCAGGGGTCCGCTCCCTC...GGGTATAGGGACCAACTGGGACCGAGTGCCCAGGGGGCCGAGCACGGTCATGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000274811.9
CDS-3UTR CCA 90 bp CCCGATCAGGGACACTCAGGCAGCTCCGTGGCGGGCGGGCAGGCAGGCAGACTACTCCCTCTCCCCGTATaGCCCAAGCCCCTCAGGATA +
Preference number: 4 (lower is better)
Translates to: PDQGHSGSSVAGGQAGRLLPLPV*PKPLRI
Trigger: TATCCTGAGGGGCTTGGGCCATACGGGGAGAGGGAG...TAGTCTGCCTGCCTGCCCGCCCGCCACGGAGCTGCCTGAGTGTCCCTGATCGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274811.9
CDS-3UTR CCA 90 bp CTGGTGCACCTGCTCGTGGAGATCAACCATGAACGGGCTCTGCTGGGTGGCTGGCGGCTTCCCCAGAGCTaGCCCGGGGTGCTGCCAGGT +
Preference number: 4 (lower is better)
Translates to: LVHLLVEINHERALLGGWRLPQS*PGVLPG
Trigger: ACCTGGCAGCACCCCGGGCCAGCTCTGGGGAAGCCG...CCAGCCACCCAGCAGAGCCCGTTCATGGTTGATCTCCACGAGCAGGTGCACCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504160.1
CDS-3UTR CCA 90 bp GGCGTCGGCCCGGCAGATGGGACACGTCCGGTTGGCCTTCAACCACTTGTCAACCTGCTTCCCCAGAGCTaGCCCGGGGTGCTGCCAGGT +
Preference number: 4 (lower is better)
Translates to: GVGPADGTRPVGLQPLVNLLPQS*PGVLPG
Trigger: ACCTGGCAGCACCCCGGGCCAGCTCTGGGGAAGCAG...GTTGACAAGTGGTTGAAGGCCAACCGGACGTGTCCCATCTGCCGGGCCGACGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513029.5
CDS-3UTR TCA 90 bp CACCTCGGAGGCGTCGGCCCGGCAGATGGGACACGTCCGGTTGGCCTTCAACCAGGGTCGTCACTGTGGTaGCCGTGTAGGACAGAGGGA +
Preference number: 4 (lower is better)
Translates to: HLGGVGPADGTRPVGLQPGSSLW*PCRTEG
Trigger: TCCCTCTGTCCTACACGGTCACCACAGTGACGACCC...TGGTTGAAGGCCAACCGGACGTGTCCCATCTGCCGGGCCGACGCCTCCGAGGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513029.5
CDS-3UTR TCA 90 bp GGCGTCGGCCCGGCAGATGGGACACGTCCGGTTGGCCTTCAACCACTTGTCAACCGTCCAGGTCCAGGCTaGTGGTGGGCCCCATTGCTG +
Preference number: 4 (lower is better)
Translates to: GVGPADGTRPVGLQPLVNRPGPG*WWAPLL
Trigger: CAGCAATGGGGCCCACCATCAGCCTGGACCTGGACG...GTTGACAAGTGGTTGAAGGCCAACCGGACGTGTCCCATCTGCCGGGCCGACGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513029.5
CDS-3UTR TCA 90 bp CCCGATCAGGGACACTCAGGCAGCTCCGTGGCGGGCGGGCAGGCAGGCAGACTAAGCGTCTGCTCCGACTaGTGGCTGTCCGGGTTAAAG +
Preference number: 4 (lower is better)
Translates to: PDQGHSGSSVAGGQAGRLSVCSD*WLSGLK
Trigger: CTTTAACCCGGACAGCCATCAGTCGGAGCAGACGCT...TAGTCTGCCTGCCTGCCCGCCCGCCACGGAGCTGCCTGAGTGTCCCTGATCGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274811.9
CDS-3UTR TCA 90 bp CACCTCGGAGGCGTCGGCCCGGCAGATGGGACACGTCCGGTTGGCCTGTGGGAAAGCGTCTGCTCCGACTaGTGGCTGTCCGGGTTAAAG +
Preference number: 4 (lower is better)
Translates to: HLGGVGPADGTRPVGLWESVCSD*WLSGLK
Trigger: CTTTAACCCGGACAGCCATCAGTCGGAGCAGACGCT...TTCCCACAGGCCAACCGGACGTGTCCCATCTGCCGGGCCGACGCCTCCGAGGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506378.1
CDS-3UTR TCA 90 bp CACTCAGGCAGCTCCGTGGCGGGCGGGCAGGCAGGCAGACTAGGGAGGGAGTCTACAGAGCCAGCTGCCTaGGTTCACTGTTCGGGGTCA +
Preference number: 4 (lower is better)
Translates to: HSGSSVAGGQAGRLGRESTEPAA*VHCSGS
Trigger: TGACCCCGAACAGTGAACTCAGGCAGCTGGCTCTGT...AGACTCCCTCCCTAGTCTGCCTGCCTGCCCGCCCGCCACGGAGCTGCCTGAGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274811.9
CDS-3UTR GCA 90 bp GAGGGGGTAATGCTGCCCACTGAACATCACGGAGCATGCTGGGAGCTGCTGGGCGCTGGCCCGGGGTGCTaGCAGGTCCCGCAGAGAATC +
Preference number: 4 (lower is better)
Translates to: EGVMLPTEHHGACWELLGAGPGC*QVPQRI
Trigger: GATTCTCTGCGGGACCTGGCAGCACCCCGGGCCAGC...GCCCAGCAGCTCCCAGCATGCTCCGTGATGTTCAGTGGGCAGCATTACCCCCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000504160.1
ENST00000513029.5
CDS-3UTR GCA 90 bp TGGAGATCAACCATGAACGGGCTCTGCTGGGTGGCTGGGTGCAGCATTCGGGGGAGAGCTGGCCCGGGGTaGTGCCAGGTCCCGCAGAGA +
Preference number: 4 (lower is better)
Translates to: WRSTMNGLCWVAGCSIRGRAGPG*CQVPQR
Trigger: TCTCTGCGGGACCTGGCAGCACCCCGGGCCAGCTCT...CCCCCGAATGCTGCACCCAGCCACCCAGCAGAGCCCGTTCATGGTTGATCTCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000504160.1
ENST00000513029.5
CDS-3UTR GCA 90 bp AGCATGACCGTGCTCGGCCCCCTGGGCACTCGGTCCCAGTTGGTCCCTATACCCAAGGACAGCTCCTGGTaGAGCGGATCGTGGGGCAGG +
Preference number: 4 (lower is better)
Translates to: SMTVLGPLGTRSQLVPIPKDSSW*SGSWGR
Trigger: CCTGCCCCACGATCCGCTGCACCAGGAGCTGTCCTT...GGGTATAGGGACCAACTGGGACCGAGTGCCCAGGGGGCCGAGCACGGTCATGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000274811.9
CDS-3UTR GCA 90 bp CACCTCGGAGGCGTCGGCCCGGCAGATGGGACACGTCCGGTTGGCCTGTGGGAAGAGCTGCTCTATGTCTaGTTTGGTGAGACCCCGGGG +
Preference number: 4 (lower is better)
Translates to: HLGGVGPADGTRPVGLWEELLYV*FGETPG
Trigger: CCCCGGGGTCTCACCAAAGCAGACATAGAGCAGCTC...TTCCCACAGGCCAACCGGACGTGTCCCATCTGCCGGGCCGACGCCTCCGAGGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506378.1
CDS-3UTR GCA 90 bp AGCATGACCGTGCTCGGCCCCCTGGGCACTCGGTCCCAGTTGGTCCCTATACCCCTGCCTGCTAGGATGTaGCGGCCCCACACGCAGTTC +
Preference number: 4 (lower is better)
Translates to: SMTVLGPLGTRSQLVPIPLPARM*RPHTQF
Trigger: GAACTGCGTGTGGGGCCGGCACATCCTAGCAGGCAG...GGGTATAGGGACCAACTGGGACCGAGTGCCCAGGGGGCCGAGCACGGTCATGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000274811.9
CDS-3UTR GCA 90 bp GAAAAGCGTCGGGTCCCGGTAGGCTCTAGGGACGTGTGCAGTACAGTGCATGGCGCAGGCGCCAGGGGCTaGCTGCTAGGATGTGCCGGC +
Preference number: 4 (lower is better)
Translates to: EKRRVPVGSRDVCSTVHGAGARG*LLGCAG
Trigger: GCCGGCACATCCTAGCAGGCAGCCCCTGGCGCCTGC...GCCATGCACTGTACTGCACACGTCCCTAGAGCCTACCGGGACCCGACGCTTTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274811.9
CDS-3UTR GCA 90 bp AGCATGACCGTGCTCGGCCCCCTGGGCACTCGGTCCCAGTTGGTCCCTATACCCAGGGCTGGGGGAAGGTaGCCACTGTCATGCCTAGGC +
Preference number: 4 (lower is better)
Translates to: SMTVLGPLGTRSQLVPIPRAGGR*PLSCLG
Trigger: GCCTAGGCATGACAGTGGGCACCTTCCCCCAGCCCT...GGGTATAGGGACCAACTGGGACCGAGTGCCCAGGGGGCCGAGCACGGTCATGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000274811.9
CDS-3UTR CCA 90 bp AGCATGACCGTGCTCGGCCCCCTGGGCACTCGGTCCCAGTTGGTCCCTATACCCGGACTCACAACCCTTTaGCCGCCCGGCCACACGTTG +
Preference number: 4 (lower is better)
Translates to: SMTVLGPLGTRSQLVPIPGLTTL*PPGHTL
Trigger: CAACGTGTGGCCGGGCGGCCAAAGGGTTGTGAGTCC...GGGTATAGGGACCAACTGGGACCGAGTGCCCAGGGGGCCGAGCACGGTCATGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000274811.9
CDS-3UTR CCA 90 bp GAGGCAGCAGAGGGGGTAATGCTGCCCACTGAACATCACGGAGCATGCTGGGAGGCAGAGAATCGCCGCTaGCCCACGGGGGCGGAGGGT +
Preference number: 4 (lower is better)
Translates to: EAAEGVMLPTEHHGACWEAENRR*PTGAEG
Trigger: ACCCTCCGCCCCCGTGGGCCAGCGGCGATTCTCTGC...CTCCCAGCATGCTCCGTGATGTTCAGTGGGCAGCATTACCCCCTCTGCTGCCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000504160.1
ENST00000513029.5
CDS-3UTR CCA 90 bp AGGGATGTGCTGGCCTGTAGGCAAGGGGAAGCCTTGGGTCGTCACTGTGGTGACGCAGAGAATCGCCGCTaGCCCACGGGGGCGGAGGGT +
Preference number: 4 (lower is better)
Translates to: RDVLACRQGEALGRHCGDAENRR*PTGAEG
Trigger: ACCCTCCGCCCCCGTGGGCCAGCGGCGATTCTCTGC...GTCACCACAGTGACGACCCAAGGCTTCCCCTTGCCTACAGGCCAGCACATCCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000504160.1
ENST00000513029.5
CDS-3UTR CCA 90 bp CTCACTCAGCCTCCCTGGGCACCTCGGAGGCGTCGGCCCGGCAGATGGGACACGTGGTGCACCTGCTCGTaGAGATCAACCATGAACGGG +
Preference number: 4 (lower is better)
Translates to: LTQPPWAPRRRRPGRWDTWCTCS*RSTMNG
Trigger: CCCGTTCATGGTTGATCTCCACGAGCAGGTGCACCA...CGTGTCCCATCTGCCGGGCCGACGCCTCCGAGGTGCCCAGGGAGGCTGAGTGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513029.5
CDS-3UTR CCA 90 bp CACCTCGGAGGCGTCGGCCCGGCAGATGGGACACGTCCGGTTGGCCTTCAACCACATCACGGAGCATGCTaGGAGCTGCTGGGCACTGCA +
Preference number: 4 (lower is better)
Translates to: HLGGVGPADGTRPVGLQPHHGAC*ELLGTA
Trigger: TGCAGTGCCCAGCAGCTCCCAGCATGCTCCGTGATG...TGGTTGAAGGCCAACCGGACGTGTCCCATCTGCCGGGCCGACGCCTCCGAGGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513029.5
CDS-3UTR CCA 90 bp GGCAGCTGCTGCATGGTGCACGCCTGGATAAGCGGGGGCGGGAGGCAGCAGAGGGGCATCCGAGGGTGCTaGGTCTGCAGAGACACAAAC +
Preference number: 4 (lower is better)
Translates to: GSCCMVHAWISGGGRQQRGIRGC*VCRDTN
Trigger: GTTTGTGTCTCTGCAGACCCAGCACCCTCGGATGCC...CCTCTGCTGCCTCCCGCCCCCGCTTATCCAGGCGTGCACCATGCAGCAGCTGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000513029.5
CDS-3UTR CCA 90 bp CGTCTGCTCCGACTGATGGCTGTCCGGGTTAAAGCGGTACGACGGGAGCTGCTCCGACGGGGAAAGGGCTaGGCCAGGCGCAGAGGTGGA +
Preference number: 4 (lower is better)
Translates to: RLLRLMAVRVKAVRRELLRRGKG*ARRRGG
Trigger: TCCACCTCTGCGCCTGGCCCAGCCCTTTCCCCGTCG...GAGCAGCTCCCGTCGTACCGCTTTAACCCGGACAGCCATCAGTCGGAGCAGACG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513029.5
CDS-3UTR CCA 90 bp GAGGCAGCAGAGGGGGTAATGCTGCCCACTGAACATCACGGAGCATGCTGGGAGGGGCAGGCGGCTGCGTaGCCTCACTCAGCCTCCCTG +
Preference number: 4 (lower is better)
Translates to: EAAEGVMLPTEHHGACWEGQAAA*PHSASL
Trigger: CAGGGAGGCTGAGTGAGGCCACGCAGCCGCCTGCCC...CTCCCAGCATGCTCCGTGATGTTCAGTGGGCAGCATTACCCCCTCTGCTGCCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000513029.5
CDS-3UTR CCA 90 bp CACCTCGGAGGCGTCGGCCCGGCAGATGGGACACGTCCGGTTGGCCTGTGGGAAGGGGACTTGGTCCGCTaGAGCCAGAACTTCCGAGAT +
Preference number: 4 (lower is better)
Translates to: HLGGVGPADGTRPVGLWEGDLVR*SQNFRD
Trigger: ATCTCGGAAGTTCTGGCTCCAGCGGACCAAGTCCCC...TTCCCACAGGCCAACCGGACGTGTCCCATCTGCCGGGCCGACGCCTCCGAGGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506378.1
CDS-3UTR CCA 90 bp GAGGCGTCGGCCCGGCAGATGGGACACGTCCGGTTGGCCTGTGGGAACATGCACTGGGACACGTCCGGTTaGCCTGTGGGAACATGCACG +
Preference number: 4 (lower is better)
Translates to: EASARQMGHVRLACGNMHWDTSG*PVGTCT
Trigger: CGTGCATGTTCCCACAGGCCAACCGGACGTGTCCCA...GTGCATGTTCCCACAGGCCAACCGGACGTGTCCCATCTGCCGGGCCGACGCCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506378.1
CDS-3UTR TCA 90 bp AGCATGACCGTGCTCGGCCCCCTGGGCACTCGGTCCCAGTTGGTCCCTATACCCCGTGGAGATCAACCATaGACGGGCTCTGCTGGGTGG +
Preference number: 4 (lower is better)
Translates to: SMTVLGPLGTRSQLVPIPRGDQP*TGSAGW
Trigger: CCACCCAGCAGAGCCCGTTCATGGTTGATCTCCACG...GGGTATAGGGACCAACTGGGACCGAGTGCCCAGGGGGCCGAGCACGGTCATGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000274811.9
CDS-3UTR TCA 90 bp GAAAAGCGTCGGGTCCCGGTAGGCTCTAGGGACGTGTGCAGTACAGTGCATGGCGACTCCTCGCTGGGCTaGCCCTGGCACCAGCTCTGG +
Preference number: 4 (lower is better)
Translates to: EKRRVPVGSRDVCSTVHGDSSLG*PWHQLW
Trigger: CCAGAGCTGGTGCCAGGGTCAGCCCAGCGAGGAGTC...GCCATGCACTGTACTGCACACGTCCCTAGAGCCTACCGGGACCCGACGCTTTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274811.9
CDS-3UTR TCA 90 bp GAAAAGCGTCGGGTCCCGGTAGGCTCTAGGGACGTGTGCAGTACAGTGCATGGCTGGTTGGAGCATCCCTaGGGCAGCAGGCGCCAGGGG +
Preference number: 4 (lower is better)
Translates to: EKRRVPVGSRDVCSTVHGWLEHP*GSRRQG
Trigger: CCCCTGGCGCCTGCTGCCTCAGGGATGCTCCAACCA...GCCATGCACTGTACTGCACACGTCCCTAGAGCCTACCGGGACCCGACGCTTTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274811.9
CDS-3UTR GCA 90 bp AGGGATGTGCTGGCCTGTAGGCAAGGGGAAGCCTTGGGTCGTCACTGTGGTGACTGCTGGGTGGCTGGGTaGAGCATTCGGGGGCTCCCG +
Preference number: 4 (lower is better)
Translates to: RDVLACRQGEALGRHCGDCWVAG*SIRGLP
Trigger: CGGGAGCCCCCGAATGCTGCACCCAGCCACCCAGCA...GTCACCACAGTGACGACCCAAGGCTTCCCCTTGCCTACAGGCCAGCACATCCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000504160.1
ENST00000513029.5
CDS-3UTR GCA 90 bp TCGGAGGCGTCGGCCCGGCAGATGGGACACGTCCGGTTGGCCTGTGGGAACATGGGCGGTATCTCTGGGTaGTCAGTCTCCGTGGCATCA +
Preference number: 4 (lower is better)
Translates to: SEASARQMGHVRLACGNMGGISG*SVSVAS
Trigger: TGATGCCACGGAGACTGAGCACCCAGAGATACCGCC...CATGTTCCCACAGGCCAACCGGACGTGTCCCATCTGCCGGGCCGACGCCTCCGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506378.1
CDS-3UTR GCA 90 bp CACCTCGGAGGCGTCGGCCCGGCAGATGGGACACGTCCGGTTGGCCTGTGGGAATGTGGAACTCATGGTTaGAGGGGAGGACTCGGAGCA +
Preference number: 4 (lower is better)
Translates to: HLGGVGPADGTRPVGLWECGTHG*RGGLGA
Trigger: TGCTCCGAGTCCTCCCCTGCAACCATGAGTTCCACA...TTCCCACAGGCCAACCGGACGTGTCCCATCTGCCGGGCCGACGCCTCCGAGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506378.1
CDS-3UTR GCA 90 bp GCTAGGATGTGCCGGCCCCACACGCAGTTCGTTCAGGGCAGCAACCCCAGCTGGGGATGGTGCTCTGTCTaGCCATCCTGGGGCCAAGGA +
Preference number: 4 (lower is better)
Translates to: ARMCRPHTQFVQGSNPSWGWCSV*PSWGQG
Trigger: TCCTTGGCCCCAGGATGGGCAGACAGAGCACCATCC...CCAGCTGGGGTTGCTGCCCTGAACGAACTGCGTGTGGGGCCGGCACATCCTAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000274811.9
CDS-3UTR GCA 90 bp CCCGATCAGGGACACTCAGGCAGCTCCGTGGCGGGCGGGCAGGCAGGCAGACTACAACACAGAGCCAGCTaGCTGAGTTCACTGTTCGGG +
Preference number: 4 (lower is better)
Translates to: PDQGHSGSSVAGGQAGRLQHRAS*LSSLFG
Trigger: CCCGAACAGTGAACTCAGGCAGCTGGCTCTGTGTTG...TAGTCTGCCTGCCTGCCCGCCCGCCACGGAGCTGCCTGAGTGTCCCTGATCGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274811.9
CDS-3UTR GCA 90 bp GCTTGGCAAATGCAGGGGCTTATTGCAGGGACTCCTCGCTGGGCTGACCCTGGCGGGCACGGGTCTGGCTaGATCCCTGGGAGGGACAAC +
Preference number: 4 (lower is better)
Translates to: AWQMQGLIAGTPRWADPGGHGSG*IPGRDN
Trigger: GTTGTCCCTCCCAGGGATGCAGCCAGACCCGTGCCC...GCCAGGGTCAGCCCAGCGAGGAGTCCCTGCAATAAGCCCCTGCATTTGCCAAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274811.9
CDS-3UTR GCA 90 bp GCTGTCCGGGTTAAAGCGGTACGACGGGAGCTGCTCTATGTCTGCTTTGGTGAGGGTCGGGACGGCGGCTaGTTCCCCAGAGCTGGCCCG +
Preference number: 4 (lower is better)
Translates to: AVRVKAVRRELLYVCFGEGRDGG*FPRAGP
Trigger: CGGGCCAGCTCTGGGGAAGCAGCCGCCGTCCCGACC...CTCACCAAAGCAGACATAGAGCAGCTCCCGTCGTACCGCTTTAACCCGGACAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513029.5
CDS-3UTR CCA 90 bp GGCATCCGAGGGTGCTGGGTCTGCAGAGACACAAACTGCCCCAGGGGCGCCATGGGCAAGGGGAAGCCTTaGGTCGTCACTGTGGTGACC +
Preference number: 4 (lower is better)
Translates to: GIRGCWVCRDTNCPRGAMGKGKP*VVTVVT
Trigger: GGTCACCACAGTGACGACCCAAGGCTTCCCCTTGCC...CATGGCGCCCCTGGGGCAGTTTGTGTCTCTGCAGACCCAGCACCCTCGGATGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000513029.5
CDS-3UTR CCA 90 bp CGGGAACACAGGGCTCCCTCTCCCCGTATGGCCCAAGCCCCTCAGGATACGTGTCATGCTGGGAGCTGCTaGGCACTGCAGCCAGGGATG +
Preference number: 4 (lower is better)
Translates to: REHRAPSPRMAQAPQDTCHAGSC*ALQPGM
Trigger: CATCCCTGGCTGCAGTGCCCAGCAGCTCCCAGCATG...ACACGTATCCTGAGGGGCTTGGGCCATACGGGGAGAGGGAGCCCTGTGTTCCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274811.9
CDS-3UTR CCA 90 bp ATAGGGCACAGGCAGCTGCTGCATGGTGCACGCCTGGATAAGCGGGGGCGGGAGCATCACGGAGCATGCTaGGAGCTGCTGGGCACTGCA +
Preference number: 4 (lower is better)
Translates to: IGHRQLLHGARLDKRGREHHGAC*ELLGTA
Trigger: TGCAGTGCCCAGCAGCTCCCAGCATGCTCCGTGATG...CTCCCGCCCCCGCTTATCCAGGCGTGCACCATGCAGCAGCTGCCTGTGCCCTAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000504160.1
ENST00000513029.5
CDS-3UTR CCA 90 bp TCCCTGGTGCACCTGCTCGTGGAGATCAACCATGAACGGGCTCTGCTGGGTGGCTGCATGGTGCACGCCTaGATAAGCGGGGGCGGGAGG +
Preference number: 4 (lower is better)
Translates to: SLVHLLVEINHERALLGGCMVHA*ISGGGR
Trigger: CCTCCCGCCCCCGCTTATCCAGGCGTGCACCATGCA...GCCACCCAGCAGAGCCCGTTCATGGTTGATCTCCACGAGCAGGTGCACCAGGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000504160.1
ENST00000513029.5
CDS-3UTR CCA 90 bp ATCTCCCAGCCGCTCGGCCAGGTTCAGGAGGGCCTCATAGTTCTCCATCTCCACCTCACTCAGCCTCCCTaGGCACCTCGGAGGCGTCGG +
Preference number: 4 (lower is better)
Translates to: ISQPLGQVQEGLIVLHLHLTQPP*APRRRR
Trigger: CCGACGCCTCCGAGGTGCCCAGGGAGGCTGAGTGAG...GTGGAGATGGAGAACTATGAGGCCCTCCTGAACCTGGCCGAGCGGCTGGGAGAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513029.5
CDS-3UTR CCA 90 bp AGGATGTGCCGGCCCCACACGCAGTTCGTTCAGGGCAGCAACCCCAGCTGGGTAAAGGCCCCCTGGAGATaGGGGTCCACAGCCTTCCTG +
Preference number: 4 (lower is better)
Translates to: RMCRPHTQFVQGSNPSWVKAPWR*GSTAFL
Trigger: CAGGAAGGCTGTGGACCCCCATCTCCAGGGGGCCTT...TACCCAGCTGGGGTTGCTGCCCTGAACGAACTGCGTGTGGGGCCGGCACATCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000274811.9
CDS-3UTR CCA 90 bp GAAAAGCGTCGGGTCCCGGTAGGCTCTAGGGACGTGTGCAGTACAGTGCATGGCGCTGGGAAGGCCCCCTaGAGATGGGGGTCCACAGCC +
Preference number: 4 (lower is better)
Translates to: EKRRVPVGSRDVCSTVHGAGKAP*RWGSTA
Trigger: GGCTGTGGACCCCCATCTCCAGGGGGCCTTCCCAGC...GCCATGCACTGTACTGCACACGTCCCTAGAGCCTACCGGGACCCGACGCTTTTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000274811.9
CDS-3UTR CCA 90 bp CGGGAACACAGGGCTCCCTCTCCCCGTATGGCCCAAGCCCCTCAGGATACGTGTGGACAGGGATCAGGCTaGGAAGGCCCCCTGGAGATG +
Preference number: 4 (lower is better)
Translates to: REHRAPSPRMAQAPQDTCGQGSG*EGPLEM
Trigger: CATCTCCAGGGGGCCTTCCCAGCCTGATCCCTGTCC...ACACGTATCCTGAGGGGCTTGGGCCATACGGGGAGAGGGAGCCCTGTGTTCCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000274811.9
CDS-3UTR CCA 90 bp ACCTCGGAGGCGTCGGCCCGGCAGATGGGACACGTCCGGTTGGCCTGTGGGAACACCCAGGAGCAGACCTaGGCAGTGTTACCTTCAACC +
Preference number: 4 (lower is better)
Translates to: TSEASARQMGHVRLACGNTQEQT*AVLPST
Trigger: GGTTGAAGGTAACACTGCCCAGGTCTGCTCCTGGGT...GTTCCCACAGGCCAACCGGACGTGTCCCATCTGCCGGGCCGACGCCTCCGAGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506378.1
CDS-3UTR CCA 90 bp TCCCTGGTGCACCTGCTCGTGGAGATCAACCATGAACGGGCTCTGCTGGGTGGCCTCTACGGGGAGGTGTaGAGGTCGGGACGGCGGCTT +
Preference number: 4 (lower is better)
Translates to: SLVHLLVEINHERALLGGLYGEV*RSGRRL
Trigger: AAGCCGCCGTCCCGACCTCCACACCTCCCCGTAGAG...GCCACCCAGCAGAGCCCGTTCATGGTTGATCTCCACGAGCAGGTGCACCAGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504160.1
CDS-3UTR CCA 90 bp AGGCGTCGGCCCGGCAGATGGGACACGTCCGGTTGGCCTTCAACCACTTGTCAAACCGCGCTGACATCATaGCCCGGCCGCCCCACTTCT +
Preference number: 4 (lower is better)
Translates to: RRRPGRWDTSGWPSTTCQTALTS*PGRPTS
Trigger: AGAAGTGGGGCGGCCGGGCCATGATGTCAGCGCGGT...TTGACAAGTGGTTGAAGGCCAACCGGACGTGTCCCATCTGCCGGGCCGACGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513029.5
3UTR CAA 72 bp CACAGCCTTCCTGGTCCCCATCCTCCTGGGACTTCCTaGGAGGAGATTCGCCCAGGCAGGTGGGAGTTGGGC +
Preference number: 4 (lower is better)
Translates to: HSLPGPHPPGTS*EEIRPGRWELG
Trigger: GCCCAACTCCCACCTGCCTGGGCGAATCTCCTCCAAGGAAGTCCCAGGAGGATGGGGACCAGGAAGGCTGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274811.9
3UTR CAA 72 bp AGCTGCTCTATGTCTGCTTTGGTGAGACCCCGGGGCTaGGCATCTCCCAGCCGCTCGGCCAGGTTCAGGAGG +
Preference number: 4 (lower is better)
Translates to: SCSMSALVRPRG*ASPSRSARFRR
Trigger: CCTCCTGAACCTGGCCGAGCGGCTGGGAGATGCCAAGCCCCGGGGTCTCACCAAAGCAGACATAGAGCAGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513029.5
CDS-3UTR TCA 90 bp AGGATGTGCCGGCCCCACACGCAGTTCGTTCAGGGCAGCAACCCCAGCTGGGTACGCCCGGCCACACGTTaGCTCCTTTGTTCCCGATCT +
Preference number: 4 (lower is better)
Translates to: RMCRPHTQFVQGSNPSWVRPATR*LLCSRS
Trigger: AGATCGGGAACAAAGGAGTCAACGTGTGGCCGGGCG...TACCCAGCTGGGGTTGCTGCCCTGAACGAACTGCGTGTGGGGCCGGCACATCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274811.9
CDS-3UTR TCA 90 bp CTGGGCACCTCGGAGGCGTCGGCCCGGCAGATGGGACACGTCCGGTTGGCCTGTCTCCGTGGCATCATGTaGGAATATGGCACACCAAAG +
Preference number: 4 (lower is better)
Translates to: LGTSEASARQMGHVRLACLRGIM*EYGTPK
Trigger: CTTTGGTGTGCCATATTCTCACATGATGCCACGGAG...ACAGGCCAACCGGACGTGTCCCATCTGCCGGGCCGACGCCTCCGAGGTGCCCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506378.1
CDS-3UTR TCA 90 bp GAAAAGCGTCGGGTCCCGGTAGGCTCTAGGGACGTGTGCAGTACAGTGCATGGCCGTCCAGGTCCAGGCTaGTGGTGGGCCCCATTGCTG +
Preference number: 4 (lower is better)
Translates to: EKRRVPVGSRDVCSTVHGRPGPG*WWAPLL
Trigger: CAGCAATGGGGCCCACCATCAGCCTGGACCTGGACG...GCCATGCACTGTACTGCACACGTCCCTAGAGCCTACCGGGACCCGACGCTTTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274811.9
CDS-3UTR TCA 90 bp CAGAGGGAGAGGAGATTGGGCACGGGTCTGGCTGCATCCCTGGGAGGGACAACCCCGACACACAATCTGTaGGCCTGTTTCCGCCTGCCC +
Preference number: 4 (lower is better)
Translates to: QRERRLGTGLAASLGGTTPTHNL*ACFRLP
Trigger: GGGCAGGCGGAAACAGGCTCACAGATTGTGTGTCGG...GGTTGTCCCTCCCAGGGATGCAGCCAGACCCGTGCCCAATCTCCTCTCCCTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274811.9
CDS-3UTR TCA 90 bp GGGGTAATGCTGCCCACTGAACATCACGGAGCATGCTGGGAGCTGCTGGGCACTAATGGGTCTGACCTCTaGCGGGGCGAGAGCGGCCCA +
Preference number: 4 (lower is better)
Translates to: GVMLPTEHHGACWELLGTNGSDL*RGESGP
Trigger: TGGGCCGCTCTCGCCCCGTCAGAGGTCAGACCCATT...AGTGCCCAGCAGCTCCCAGCATGCTCCGTGATGTTCAGTGGGCAGCATTACCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513029.5
CDS-3UTR GCA 90 bp AGCATGACCGTGCTCGGCCCCCTGGGCACTCGGTCCCAGTTGGTCCCTATACCCTGGCCACCTAGTCACTaGCAGAGCCCATGGTCGCAT +
Preference number: 4 (lower is better)
Translates to: SMTVLGPLGTRSQLVPIPWPPSH*QSPWSH
Trigger: ATGCGACCATGGGCTCTGGCAGTGACTAGGTGGCCA...GGGTATAGGGACCAACTGGGACCGAGTGCCCAGGGGGCCGAGCACGGTCATGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000274811.9
CDS-3UTR GCA 90 bp GCTTGGCAAATGCAGGGGCTTATTGCAGGGACTCCTCGCTGGGCTGACCCTGGCCTGCAGCCAGGGATGTaGTGGCCTGTAGGCAAGGGG +
Preference number: 4 (lower is better)
Translates to: AWQMQGLIAGTPRWADPGLQPGM*WPVGKG
Trigger: CCCCTTGCCTACAGGCCAGCACATCCCTGGCTGCAG...GCCAGGGTCAGCCCAGCGAGGAGTCCCTGCAATAAGCCCCTGCATTTGCCAAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274811.9
CDS-3UTR GCA 90 bp GAGGGGGTAATGCTGCCCACTGAACATCACGGAGCATGCTGGGAGCTGCTGGGCCTGCAGCCAGGGATGTaGTGGCCTGTAGGCAAGGGG +
Preference number: 4 (lower is better)
Translates to: EGVMLPTEHHGACWELLGLQPGM*WPVGKG
Trigger: CCCCTTGCCTACAGGCCAGCACATCCCTGGCTGCAG...GCCCAGCAGCTCCCAGCATGCTCCGTGATGTTCAGTGGGCAGCATTACCCCCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000504160.1
ENST00000513029.5
CDS-3UTR GCA 90 bp CGGGAACACAGGGCTCCCTCTCCCCGTATGGCCCAAGCCCCTCAGGATACGTGTTGCAGAGACACAAACTaGCCCAGGGGCGCCATGTGG +
Preference number: 4 (lower is better)
Translates to: REHRAPSPRMAQAPQDTCCRDTN*PRGAMW
Trigger: CCACATGGCGCCCCTGGGGCAGTTTGTGTCTCTGCA...ACACGTATCCTGAGGGGCTTGGGCCATACGGGGAGAGGGAGCCCTGTGTTCCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000274811.9
CDS-3UTR GCA 90 bp CGTCTGCTCCGACTGATGGCTGTCCGGGTTAAAGCGGTACGACGGGAGCTGCTCAAGGACAGCTCCTGGTaGAGCGGATCGTGGGGCAGG +
Preference number: 4 (lower is better)
Translates to: RLLRLMAVRVKAVRRELLKDSSW*SGSWGR
Trigger: CCTGCCCCACGATCCGCTGCACCAGGAGCTGTCCTT...GAGCAGCTCCCGTCGTACCGCTTTAACCCGGACAGCCATCAGTCGGAGCAGACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513029.5
CDS-3UTR GCA 90 bp CGGGAACACAGGGCTCCCTCTCCCCGTATGGCCCAAGCCCCTCAGGATACGTGTGAGCCTGTTTCCGCCTaGCCCAGGAACTGTAAGGGG +
Preference number: 4 (lower is better)
Translates to: REHRAPSPRMAQAPQDTCEPVSA*PRNCKG
Trigger: CCCCTTACAGTTCCTGGGGCAGGCGGAAACAGGCTC...ACACGTATCCTGAGGGGCTTGGGCCATACGGGGAGAGGGAGCCCTGTGTTCCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274811.9
CDS-3UTR GCA 90 bp ATAGGGCACAGGCAGCTGCTGCATGGTGCACGCCTGGATAAGCGGGGGCGGGAGTGGTACGGCCCAGATTaGCCAACAGACCAATGGCGG +
Preference number: 4 (lower is better)
Translates to: IGHRQLLHGARLDKRGREWYGPD*PTDQWR
Trigger: CCGCCATTGGTCTGTTGGGCAATCTGGGCCGTACCA...CTCCCGCCCCCGCTTATCCAGGCGTGCACCATGCAGCAGCTGCCTGTGCCCTAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000513029.5
CDS-3UTR CCA 90 bp GAAAAGCGTCGGGTCCCGGTAGGCTCTAGGGACGTGTGCAGTACAGTGCATGGCGCGGCAGCCGGCGGCTaGCCCTTTAAGAACTGTCCG +
Preference number: 4 (lower is better)
Translates to: EKRRVPVGSRDVCSTVHGAAAGG*PFKNCP
Trigger: CGGACAGTTCTTAAAGGGCCAGCCGCCGGCTGCCGC...GCCATGCACTGTACTGCACACGTCCCTAGAGCCTACCGGGACCCGACGCTTTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274811.9
CDS-3UTR CCA 90 bp TCCCTGGTGCACCTGCTCGTGGAGATCAACCATGAACGGGCTCTGCTGGGTGGCGGACTCACAACCCTTTaGCCGCCCGGCCACACGTTG +
Preference number: 4 (lower is better)
Translates to: SLVHLLVEINHERALLGGGLTTL*PPGHTL
Trigger: CAACGTGTGGCCGGGCGGCCAAAGGGTTGTGAGTCC...GCCACCCAGCAGAGCCCGTTCATGGTTGATCTCCACGAGCAGGTGCACCAGGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504160.1
CDS-3UTR CCA 90 bp GAAAAGCGTCGGGTCCCGGTAGGCTCTAGGGACGTGTGCAGTACAGTGCATGGCACGGGCTCTGCTGGGTaGCTGGGTGCAGCATTCGGG +
Preference number: 4 (lower is better)
Translates to: EKRRVPVGSRDVCSTVHGTGSAG*LGAAFG
Trigger: CCCGAATGCTGCACCCAGCCACCCAGCAGAGCCCGT...GCCATGCACTGTACTGCACACGTCCCTAGAGCCTACCGGGACCCGACGCTTTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274811.9
CDS-3UTR CCA 90 bp GCTAGGATGTGCCGGCCCCACACGCAGTTCGTTCAGGGCAGCAACCCCAGCTGGATGAACGGGCTCTGCTaGGTGGCTGGGTGCAGCATT +
Preference number: 4 (lower is better)
Translates to: ARMCRPHTQFVQGSNPSWMNGLC*VAGCSI
Trigger: AATGCTGCACCCAGCCACCCAGCAGAGCCCGTTCAT...CCAGCTGGGGTTGCTGCCCTGAACGAACTGCGTGTGGGGCCGGCACATCCTAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274811.9
CDS-3UTR CCA 90 bp CGGGAACACAGGGCTCCCTCTCCCCGTATGGCCCAAGCCCCTCAGGATACGTGTGGCAAGGGGAAGCCTTaGGTCGTCACTGTGGTGACC +
Preference number: 4 (lower is better)
Translates to: REHRAPSPRMAQAPQDTCGKGKP*VVTVVT
Trigger: GGTCACCACAGTGACGACCCAAGGCTTCCCCTTGCC...ACACGTATCCTGAGGGGCTTGGGCCATACGGGGAGAGGGAGCCCTGTGTTCCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000274811.9
CDS-3UTR CCA 90 bp CCAGGGATGTGCTGGCCTGTAGGCAAGGGGAAGCCTTGGGTCGTCACTGTGGTGCATGCTGGGAGCTGCTaGGCACTGCAGCCAGGGATG +
Preference number: 4 (lower is better)
Translates to: PGMCWPVGKGKPWVVTVVHAGSC*ALQPGM
Trigger: CATCCCTGGCTGCAGTGCCCAGCAGCTCCCAGCATG...CACCACAGTGACGACCCAAGGCTTCCCCTTGCCTACAGGCCAGCACATCCCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504160.1
ENST00000513029.5
CDS-3UTR CCA 90 bp GCTAGGATGTGCCGGCCCCACACGCAGTTCGTTCAGGGCAGCAACCCCAGCTGGGGCATCCGAGGGTGCTaGGTCTGCAGAGACACAAAC +
Preference number: 4 (lower is better)
Translates to: ARMCRPHTQFVQGSNPSWGIRGC*VCRDTN
Trigger: GTTTGTGTCTCTGCAGACCCAGCACCCTCGGATGCC...CCAGCTGGGGTTGCTGCCCTGAACGAACTGCGTGTGGGGCCGGCACATCCTAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000274811.9
CDS-3UTR CCA 90 bp CAGAGGGAGAGGAGATTGGGCACGGGTCTGGCTGCATCCCTGGGAGGGACAACCGTCTGTCTACGCACCTaGCAGTGCCACCTGGGCAGA +
Preference number: 4 (lower is better)
Translates to: QRERRLGTGLAASLGGTTVCLRT*QCHLGR
Trigger: TCTGCCCAGGTGGCACTGCCAGGTGCGTAGACAGAC...GGTTGTCCCTCCCAGGGATGCAGCCAGACCCGTGCCCAATCTCCTCTCCCTCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274811.9
CDS-3UTR CCA 90 bp GCTAGGATGTGCCGGCCCCACACGCAGTTCGTTCAGGGCAGCAACCCCAGCTGGAGAGGGAGAGGAGATTaGGCACGGGTCTGGCTGCAT +
Preference number: 4 (lower is better)
Translates to: ARMCRPHTQFVQGSNPSWRGRGD*ARVWLH
Trigger: ATGCAGCCAGACCCGTGCCCAATCTCCTCTCCCTCT...CCAGCTGGGGTTGCTGCCCTGAACGAACTGCGTGTGGGGCCGGCACATCCTAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274811.9
CDS-3UTR CCA 90 bp CAGAGGGAGAGGAGATTGGGCACGGGTCTGGCTGCATCCCTGGGAGGGACAACCGCACTCGGTCCCAGTTaGTCCCTATACCCGCCCCTA +
Preference number: 4 (lower is better)
Translates to: QRERRLGTGLAASLGGTTALGPS*SLYPPL
Trigger: TAGGGGCGGGTATAGGGACCAACTGGGACCGAGTGC...GGTTGTCCCTCCCAGGGATGCAGCCAGACCCGTGCCCAATCTCCTCTCCCTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274811.9
CDS-3UTR CCA 90 bp GCTAGGATGTGCCGGCCCCACACGCAGTTCGTTCAGGGCAGCAACCCCAGCTGGTGGGACCAGGGAAAGTaGGTGGGAAGCTCAGCCAGA +
Preference number: 4 (lower is better)
Translates to: ARMCRPHTQFVQGSNPSWWDQGK*VGSSAR
Trigger: TCTGGCTGAGCTTCCCACCCACTTTCCCTGGTCCCA...CCAGCTGGGGTTGCTGCCCTGAACGAACTGCGTGTGGGGCCGGCACATCCTAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274811.9
CDS-3UTR CCA 90 bp AGCATGACCGTGCTCGGCCCCCTGGGCACTCGGTCCCAGTTGGTCCCTATACCCACTTTGGGTTCTCCATaGGGGTGGGACCAGGCTGAC +
Preference number: 4 (lower is better)
Translates to: SMTVLGPLGTRSQLVPIPTLGSP*GWDQAD
Trigger: GTCAGCCTGGTCCCACCCCCATGGAGAACCCAAAGT...GGGTATAGGGACCAACTGGGACCGAGTGCCCAGGGGGCCGAGCACGGTCATGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000274811.9
CDS-3UTR TCA 90 bp TGGTGCACCTGCTCGTGGAGATCAACCATGAACGGGCTCTGCTGGGTGGCTGGGCGCCCGGCCACACGTTaGCTCCTTTGTTCCCGATCT +
Preference number: 4 (lower is better)
Translates to: WCTCSWRSTMNGLCWVAGRPATR*LLCSRS
Trigger: AGATCGGGAACAAAGGAGTCAACGTGTGGCCGGGCG...CCCAGCCACCCAGCAGAGCCCGTTCATGGTTGATCTCCACGAGCAGGTGCACCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504160.1
CDS-3UTR TCA 90 bp CCCGATCAGGGACACTCAGGCAGCTCCGTGGCGGGCGGGCAGGCAGGCAGACTACTCCGTGGCATCATGTaGGAATATGGCACACCAAAG +
Preference number: 4 (lower is better)
Translates to: PDQGHSGSSVAGGQAGRLLRGIM*EYGTPK
Trigger: CTTTGGTGTGCCATATTCTCACATGATGCCACGGAG...TAGTCTGCCTGCCTGCCCGCCCGCCACGGAGCTGCCTGAGTGTCCCTGATCGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274811.9
CDS-3UTR TCA 90 bp AGCATGACCGTGCTCGGCCCCCTGGGCACTCGGTCCCAGTTGGTCCCTATACCCGAGCATGAGACCTTCTaGCCCAGGATGGTGCTCTGT +
Preference number: 4 (lower is better)
Translates to: SMTVLGPLGTRSQLVPIPEHETF*PRMVLC
Trigger: ACAGAGCACCATCCTGGGTCAGAAGGTCTCATGCTC...GGGTATAGGGACCAACTGGGACCGAGTGCCCAGGGGGCCGAGCACGGTCATGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000274811.9
CDS-3UTR TCA 90 bp GCTAGGATGTGCCGGCCCCACACGCAGTTCGTTCAGGGCAGCAACCCCAGCTGGTCAGGAAATGGCTCGTaGCACCGTCTGTCTACGCAC +
Preference number: 4 (lower is better)
Translates to: ARMCRPHTQFVQGSNPSWSGNGS*HRLSTH
Trigger: GTGCGTAGACAGACGGTGTCACGAGCCATTTCCTGA...CCAGCTGGGGTTGCTGCCCTGAACGAACTGCGTGTGGGGCCGGCACATCCTAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274811.9
CDS-3UTR TCA 90 bp GCTTGGCAAATGCAGGGGCTTATTGCAGGGACTCCTCGCTGGGCTGACCCTGGCGAGGGAGAAATGCCCTaGAAAGCGTCGGGTCCCGGT +
Preference number: 4 (lower is better)
Translates to: AWQMQGLIAGTPRWADPGEGEMP*KASGPG
Trigger: ACCGGGACCCGACGCTTTTCAGGGCATTTCTCCCTC...GCCAGGGTCAGCCCAGCGAGGAGTCCCTGCAATAAGCCCCTGCATTTGCCAAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274811.9
CDS-3UTR GCA 90 bp CCCCTGGGCACTCGGTCCCAGTTGGTCCCTATACCCGCCCCTATTAAACCAAAAGCTGGCCCGGGGTGCTaGCAGGTCCCGCAGAGAATC +
Preference number: 4 (lower is better)
Translates to: PLGTRSQLVPIPAPIKPKAGPGC*QVPQRI
Trigger: GATTCTCTGCGGGACCTGGCAGCACCCCGGGCCAGC...TTTTGGTTTAATAGGGGCGGGTATAGGGACCAACTGGGACCGAGTGCCCAGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000274811.9
CDS-3UTR GCA 90 bp CCCCTGGGCACTCGGTCCCAGTTGGTCCCTATACCCGCCCCTATTAAACCAAAATGCTGGGTGGCTGGGTaGAGCATTCGGGGGCTCCCG +
Preference number: 4 (lower is better)
Translates to: PLGTRSQLVPIPAPIKPKCWVAG*SIRGLP
Trigger: CGGGAGCCCCCGAATGCTGCACCCAGCCACCCAGCA...TTTTGGTTTAATAGGGGCGGGTATAGGGACCAACTGGGACCGAGTGCCCAGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000274811.9
CDS-3UTR GCA 90 bp GAAAAGCGTCGGGTCCCGGTAGGCTCTAGGGACGTGTGCAGTACAGTGCATGGCACCATGAACGGGCTCTaGTGGGTGGCTGGGTGCAGC +
Preference number: 4 (lower is better)
Translates to: EKRRVPVGSRDVCSTVHGTMNGL*WVAGCS
Trigger: GCTGCACCCAGCCACCCAGCAGAGCCCGTTCATGGT...GCCATGCACTGTACTGCACACGTCCCTAGAGCCTACCGGGACCCGACGCTTTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274811.9
CDS-3UTR GCA 90 bp GGGGTAATGCTGCCCACTGAACATCACGGAGCATGCTGGGAGCTGCTGGGCACTACCATGAACGGGCTCTaGTGGGTGGCTGGGTGCAGC +
Preference number: 4 (lower is better)
Translates to: GVMLPTEHHGACWELLGTTMNGL*WVAGCS
Trigger: GCTGCACCCAGCCACCCAGCAGAGCCCGTTCATGGT...AGTGCCCAGCAGCTCCCAGCATGCTCCGTGATGTTCAGTGGGCAGCATTACCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504160.1
ENST00000513029.5
CDS-3UTR GCA 90 bp CAGAGGGAGAGGAGATTGGGCACGGGTCTGGCTGCATCCCTGGGAGGGACAACCGGTCCCTGGTGCACCTaGTCGTGGAGATCAACCATG +
Preference number: 4 (lower is better)
Translates to: QRERRLGTGLAASLGGTTGPWCT*SWRSTM
Trigger: CATGGTTGATCTCCACGAGCAGGTGCACCAGGGACC...GGTTGTCCCTCCCAGGGATGCAGCCAGACCCGTGCCCAATCTCCTCTCCCTCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274811.9
CDS-3UTR GCA 90 bp TGGTGCACCTGCTCGTGGAGATCAACCATGAACGGGCTCTGCTGGGTGGCTGGGGGCACAGGCAGCTGCTaGATGGTGCACGCCTGGATA +
Preference number: 4 (lower is better)
Translates to: WCTCSWRSTMNGLCWVAGGTGSC*MVHAWI
Trigger: TATCCAGGCGTGCACCATGCAGCAGCTGCCTGTGCC...CCCAGCCACCCAGCAGAGCCCGTTCATGGTTGATCTCCACGAGCAGGTGCACCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000504160.1
ENST00000513029.5
CDS-3UTR GCA 90 bp CAGAGGGAGAGGAGATTGGGCACGGGTCTGGCTGCATCCCTGGGAGGGACAACCGAGCTGCTCTATGTCTaGTTTGGTGAGACCCCGGGG +
Preference number: 4 (lower is better)
Translates to: QRERRLGTGLAASLGGTTELLYV*FGETPG
Trigger: CCCCGGGGTCTCACCAAAGCAGACATAGAGCAGCTC...GGTTGTCCCTCCCAGGGATGCAGCCAGACCCGTGCCCAATCTCCTCTCCCTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274811.9
CDS-3UTR GCA 90 bp GAAAAGCGTCGGGTCCCGGTAGGCTCTAGGGACGTGTGCAGTACAGTGCATGGCAGGACTCGGAGCAGCTaGCGCGCCTCGAAGTCACTG +
Preference number: 4 (lower is better)
Translates to: EKRRVPVGSRDVCSTVHGRTRSS*RASKSL
Trigger: CAGTGACTTCGAGGCGCGGCAGCTGCTCCGAGTCCT...GCCATGCACTGTACTGCACACGTCCCTAGAGCCTACCGGGACCCGACGCTTTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274811.9
CDS-3UTR GCA 90 bp GGGGTAATGCTGCCCACTGAACATCACGGAGCATGCTGGGAGCTGCTGGGCACTAGGACTCGGAGCAGCTaGCGCGCCTCGAAGTCACTG +
Preference number: 4 (lower is better)
Translates to: GVMLPTEHHGACWELLGTRTRSS*RASKSL
Trigger: CAGTGACTTCGAGGCGCGGCAGCTGCTCCGAGTCCT...AGTGCCCAGCAGCTCCCAGCATGCTCCGTGATGTTCAGTGGGCAGCATTACCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513029.5
CDS-3UTR GCA 90 bp GGCATCCGAGGGTGCTGGGTCTGCAGAGACACAAACTGCCCCAGGGGCGCCATGTGTGGAACTCATGGTTaGAGGGGAGGACTCGGAGCA +
Preference number: 4 (lower is better)
Translates to: GIRGCWVCRDTNCPRGAMCGTHG*RGGLGA
Trigger: TGCTCCGAGTCCTCCCCTGCAACCATGAGTTCCACA...CATGGCGCCCCTGGGGCAGTTTGTGTCTCTGCAGACCCAGCACCCTCGGATGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000513029.5
CDS-3UTR GCA 90 bp CAGAGGGAGAGGAGATTGGGCACGGGTCTGGCTGCATCCCTGGGAGGGACAACCACCCCTGGCACTCAGTaGCAGCAGGAAAAGGAGGGA +
Preference number: 4 (lower is better)
Translates to: QRERRLGTGLAASLGGTTTPGTQ*QQEKEG
Trigger: TCCCTCCTTTTCCTGCTGGCACTGAGTGCCAGGGGT...GGTTGTCCCTCCCAGGGATGCAGCCAGACCCGTGCCCAATCTCCTCTCCCTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274811.9
CDS-3UTR GCA 90 bp CCAGGGATGTGCTGGCCTGTAGGCAAGGGGAAGCCTTGGGTCGTCACTGTGGTGGTCACCCCCAAGAGCTaGAGCACCGCGCTGACATCA +
Preference number: 4 (lower is better)
Translates to: PGMCWPVGKGKPWVVTVVVTPKS*STALTS
Trigger: TGATGTCAGCGCGGTGCTGCAGCTCTTGGGGGTGAC...CACCACAGTGACGACCCAAGGCTTCCCCTTGCCTACAGGCCAGCACATCCCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000513029.5
CDS-3UTR CCA 90 bp CGCAGTTCGTTCAGGGCAGCAACCCCAGCTGGGTATAGGACAAGAAAGGATTGGGGGCTTCCCCAGAGCTaGCCCGGGGTGCTGCCAGGT +
Preference number: 4 (lower is better)
Translates to: RSSFRAATPAGYRTRKDWGLPQS*PGVLPG
Trigger: ACCTGGCAGCACCCCGGGCCAGCTCTGGGGAAGCCC...CCAATCCTTTCTTGTCCTATACCCAGCTGGGGTTGCTGCCCTGAACGAACTGCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000274811.9
CDS-3UTR CCA 90 bp CCAGGGATGTGCTGGCCTGTAGGCAAGGGGAAGCCTTGGGTCGTCACTGTGGTGAGAGGGACAGGTCCCTaGTGCACCTGCTCGTGGAGA +
Preference number: 4 (lower is better)
Translates to: PGMCWPVGKGKPWVVTVVRGTGP*CTCSWR
Trigger: TCTCCACGAGCAGGTGCACCAGGGACCTGTCCCTCT...CACCACAGTGACGACCCAAGGCTTCCCCTTGCCTACAGGCCAGCACATCCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504160.1
ENST00000513029.5
CDS-3UTR CCA 90 bp TGGAGATCAACCATGAACGGGCTCTGCTGGGTGGCTGGGTGCAGCATTCGGGGGGGCAAGGGGAAGCCTTaGGTCGTCACTGTGGTGACC +
Preference number: 4 (lower is better)
Translates to: WRSTMNGLCWVAGCSIRGGKGKP*VVTVVT
Trigger: GGTCACCACAGTGACGACCCAAGGCTTCCCCTTGCC...CCCCCGAATGCTGCACCCAGCCACCCAGCAGAGCCCGTTCATGGTTGATCTCCA
62% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000504160.1
ENST00000513029.5
CDS-3UTR CCA 90 bp GGGGTAATGCTGCCCACTGAACATCACGGAGCATGCTGGGAGCTGCTGGGCACTCATGCTGGGAGCTGCTaGGCACTGCAGCCAGGGATG +
Preference number: 4 (lower is better)
Translates to: GVMLPTEHHGACWELLGTHAGSC*ALQPGM
Trigger: CATCCCTGGCTGCAGTGCCCAGCAGCTCCCAGCATG...AGTGCCCAGCAGCTCCCAGCATGCTCCGTGATGTTCAGTGGGCAGCATTACCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504160.1
ENST00000513029.5
CDS-3UTR CCA 90 bp GAAAAGCGTCGGGTCCCGGTAGGCTCTAGGGACGTGTGCAGTACAGTGCATGGCCCAAAGGACAGCTCCTaGTGCAGCGGATCGTGGGGC +
Preference number: 4 (lower is better)
Translates to: EKRRVPVGSRDVCSTVHGPKDSS*CSGSWG
Trigger: GCCCCACGATCCGCTGCACCAGGAGCTGTCCTTTGG...GCCATGCACTGTACTGCACACGTCCCTAGAGCCTACCGGGACCCGACGCTTTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274811.9
CDS-3UTR CCA 90 bp AGGGATGTGCTGGCCTGTAGGCAAGGGGAAGCCTTGGGTCGTCACTGTGGTGACCCAAAGGACAGCTCCTaGTGCAGCGGATCGTGGGGC +
Preference number: 4 (lower is better)
Translates to: RDVLACRQGEALGRHCGDPKDSS*CSGSWG
Trigger: GCCCCACGATCCGCTGCACCAGGAGCTGTCCTTTGG...GTCACCACAGTGACGACCCAAGGCTTCCCCTTGCCTACAGGCCAGCACATCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513029.5
CDS-3UTR CCA 90 bp CTCCCTGGGCACCTCGGAGGCGTCGGCCCGGCAGATGGGACACGTCCGGTTGGCCATCATGTGAGAATATaGCACACCAAAGGACAGCTC +
Preference number: 4 (lower is better)
Translates to: LPGHLGGVGPADGTRPVGHHVRI*HTKGQL
Trigger: GAGCTGTCCTTTGGTGTGCCATATTCTCACATGATG...GCCAACCGGACGTGTCCCATCTGCCGGGCCGACGCCTCCGAGGTGCCCAGGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506378.1
ENST00000513029.5
CDS-3UTR CCA 90 bp GCTAGGATGTGCCGGCCCCACACGCAGTTCGTTCAGGGCAGCAACCCCAGCTGGCTGGAATGTTGTTCCTaGGATGAGGGTCCCCTAGGG +
Preference number: 4 (lower is better)
Translates to: ARMCRPHTQFVQGSNPSWLECCS*DEGPLG
Trigger: CCCTAGGGGACCCTCATCCCAGGAACAACATTCCAG...CCAGCTGGGGTTGCTGCCCTGAACGAACTGCGTGTGGGGCCGGCACATCCTAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000274811.9
CDS-3UTR CCA 90 bp GAAAAGCGTCGGGTCCCGGTAGGCTCTAGGGACGTGTGCAGTACAGTGCATGGCGATTGGGCACGGGTCTaGCTGCATCCCTGGGAGGGA +
Preference number: 4 (lower is better)
Translates to: EKRRVPVGSRDVCSTVHGDWARV*LHPWEG
Trigger: TCCCTCCCAGGGATGCAGCCAGACCCGTGCCCAATC...GCCATGCACTGTACTGCACACGTCCCTAGAGCCTACCGGGACCCGACGCTTTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274811.9
CDS-3UTR CCA 90 bp CACTCAGGCAGCTCCGTGGCGGGCGGGCAGGCAGGCAGACTAGGGAGGGAGTCTAGGACAAGAAAGGATTaGGACCAGGGAAAGTGGGTG +
Preference number: 4 (lower is better)
Translates to: HSGSSVAGGQAGRLGRESRTRKD*DQGKWV
Trigger: CACCCACTTTCCCTGGTCCCAATCCTTTCTTGTCCT...AGACTCCCTCCCTAGTCTGCCTGCCTGCCCGCCCGCCACGGAGCTGCCTGAGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274811.9
CDS-3UTR TCA 90 bp AGGGATGTGCTGGCCTGTAGGCAAGGGGAAGCCTTGGGTCGTCACTGTGGTGACCGTGGAGATCAACCATaGACGGGCTCTGCTGGGTGG +
Preference number: 4 (lower is better)
Translates to: RDVLACRQGEALGRHCGDRGDQP*TGSAGW
Trigger: CCACCCAGCAGAGCCCGTTCATGGTTGATCTCCACG...GTCACCACAGTGACGACCCAAGGCTTCCCCTTGCCTACAGGCCAGCACATCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504160.1
ENST00000513029.5
CDS-3UTR TCA 90 bp AGGGATGTGCTGGCCTGTAGGCAAGGGGAAGCCTTGGGTCGTCACTGTGGTGACGGGTCGTCACTGTGGTaGCCGTGTAGGACAGAGGGA +
Preference number: 4 (lower is better)
Translates to: RDVLACRQGEALGRHCGDGSSLW*PCRTEG
Trigger: TCCCTCTGTCCTACACGGTCACCACAGTGACGACCC...GTCACCACAGTGACGACCCAAGGCTTCCCCTTGCCTACAGGCCAGCACATCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504160.1
ENST00000513029.5
CDS-3UTR TCA 90 bp GAGGCAGCAGAGGGGGTAATGCTGCCCACTGAACATCACGGAGCATGCTGGGAGGCGCCTCGAAGTCACTaGAGCAGACCACACACAGCG +
Preference number: 4 (lower is better)
Translates to: EAAEGVMLPTEHHGACWEAPRSH*SRPHTA
Trigger: CGCTGTGTGTGGTCTGCTTCAGTGACTTCGAGGCGC...CTCCCAGCATGCTCCGTGATGTTCAGTGGGCAGCATTACCCCCTCTGCTGCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000513029.5
CDS-3UTR TCA 90 bp GCTAGGATGTGCCGGCCCCACACGCAGTTCGTTCAGGGCAGCAACCCCAGCTGGCGCCATTTCAGAGCATaGGACCTTCTGACCCAGGAT +
Preference number: 4 (lower is better)
Translates to: ARMCRPHTQFVQGSNPSWRHFRA*DLLTQD
Trigger: ATCCTGGGTCAGAAGGTCTCATGCTCTGAAATGGCG...CCAGCTGGGGTTGCTGCCCTGAACGAACTGCGTGTGGGGCCGGCACATCCTAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274811.9
CDS-3UTR TCA 90 bp GTGTGGAACTCATGGTTGCAGGGGAGGACTCGGAGCAGCTGCCGCGCCTCGAAGTGCCGCCTGAGATACTaGAGTGCAATGGGTCTGACC +
Preference number: 4 (lower is better)
Translates to: VWNSWLQGRTRSSCRASKCRLRY*SAMGLT
Trigger: GGTCAGACCCATTGCACTTCAGTATCTCAGGCGGCA...CTTCGAGGCGCGGCAGCTGCTCCGAGTCCTCCCCTGCAACCATGAGTTCCACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513029.5
CDS-3UTR GCA 90 bp ACCTGCTCGTGGAGATCAACCATGAACGGGCTCTGCTGGGTGGCTGGGTGCAGCTGGCCACCTAGTCACTaGCAGAGCCCATGGTCGCAT +
Preference number: 4 (lower is better)
Translates to: TCSWRSTMNGLCWVAGCSWPPSH*QSPWSH
Trigger: ATGCGACCATGGGCTCTGGCAGTGACTAGGTGGCCA...GCTGCACCCAGCCACCCAGCAGAGCCCGTTCATGGTTGATCTCCACGAGCAGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504160.1
ENST00000513029.5
CDS-3UTR GCA 90 bp GCAGCCAGGGATGTGCTGGCCTGTAGGCAAGGGGAAGCCTTGGGTCGTCACTGTGAGCTGCTCTATGTCTaGTTTGGTGAGACCCCGGGG +
Preference number: 4 (lower is better)
Translates to: AARDVLACRQGEALGRHCELLYV*FGETPG
Trigger: CCCCGGGGTCTCACCAAAGCAGACATAGAGCAGCTC...ACAGTGACGACCCAAGGCTTCCCCTTGCCTACAGGCCAGCACATCCCTGGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513029.5
CDS-3UTR GCA 90 bp AGGATGTGCCGGCCCCACACGCAGTTCGTTCAGGGCAGCAACCCCAGCTGGGTATGTGGAACTCATGGTTaGAGGGGAGGACTCGGAGCA +
Preference number: 4 (lower is better)
Translates to: RMCRPHTQFVQGSNPSWVCGTHG*RGGLGA
Trigger: TGCTCCGAGTCCTCCCCTGCAACCATGAGTTCCACA...TACCCAGCTGGGGTTGCTGCCCTGAACGAACTGCGTGTGGGGCCGGCACATCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000274811.9
CDS-3UTR GCA 90 bp CCCCTGGGCACTCGGTCCCAGTTGGTCCCTATACCCGCCCCTATTAAACCAAAACGGCACACGCATGCATaGAGGCCGGCCAGCATGACC +
Preference number: 4 (lower is better)
Translates to: PLGTRSQLVPIPAPIKPKRHTHA*RPASMT
Trigger: GGTCATGCTGGCCGGCCTGCATGCATGCGTGTGCCG...TTTTGGTTTAATAGGGGCGGGTATAGGGACCAACTGGGACCGAGTGCCCAGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000274811.9
CDS-3UTR GCA 90 bp CCCGATCAGGGACACTCAGGCAGCTCCGTGGCGGGCGGGCAGGCAGGCAGACTATGTTGGAATCACTGCTaGAGCCGACACACAATCTGT +
Preference number: 4 (lower is better)
Translates to: PDQGHSGSSVAGGQAGRLCWNHC*SRHTIC
Trigger: ACAGATTGTGTGTCGGCTGCAGCAGTGATTCCAACA...TAGTCTGCCTGCCTGCCCGCCCGCCACGGAGCTGCCTGAGTGTCCCTGATCGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274811.9
CDS-3UTR GCA 90 bp AGCATGACCGTGCTCGGCCCCCTGGGCACTCGGTCCCAGTTGGTCCCTATACCCAGGTGCCCACTGTCATaGCTAGGCCAGAAGTTGGTA +
Preference number: 4 (lower is better)
Translates to: SMTVLGPLGTRSQLVPIPRCPLS*LGQKLV
Trigger: TACCAACTTCTGGCCTAGGCATGACAGTGGGCACCT...GGGTATAGGGACCAACTGGGACCGAGTGCCCAGGGGGCCGAGCACGGTCATGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000274811.9
CDS-3UTR CCA 90 bp CGCAGTTCGTTCAGGGCAGCAACCCCAGCTGGGTATAGGACAAGAAAGGATTGGCGGGACGGCGGCTGCTaGGAGGGTAAGCGCTCATCC +
Preference number: 4 (lower is better)
Translates to: RSSFRAATPAGYRTRKDWRDGGC*EGKRSS
Trigger: GGATGAGCGCTTACCCTCCCAGCAGCCGCCGTCCCG...CCAATCCTTTCTTGTCCTATACCCAGCTGGGGTTGCTGCCCTGAACGAACTGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274811.9
CDS-3UTR CCA 90 bp TGGTGCACCTGCTCGTGGAGATCAACCATGAACGGGCTCTGCTGGGTGGCTGGGATGAACGGGCTCTGCTaGGTGGCTGGGTGCAGCATT +
Preference number: 4 (lower is better)
Translates to: WCTCSWRSTMNGLCWVAGMNGLC*VAGCSI
Trigger: AATGCTGCACCCAGCCACCCAGCAGAGCCCGTTCAT...CCCAGCCACCCAGCAGAGCCCGTTCATGGTTGATCTCCACGAGCAGGTGCACCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504160.1
ENST00000513029.5
CDS-3UTR CCA 90 bp TGGAGATCAACCATGAACGGGCTCTGCTGGGTGGCTGGGTGCAGCATTCGGGGGATGAACGGGCTCTGCTaGGTGGCTGGGTGCAGCATT +
Preference number: 4 (lower is better)
Translates to: WRSTMNGLCWVAGCSIRGMNGLC*VAGCSI
Trigger: AATGCTGCACCCAGCCACCCAGCAGAGCCCGTTCAT...CCCCCGAATGCTGCACCCAGCCACCCAGCAGAGCCCGTTCATGGTTGATCTCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000504160.1
ENST00000513029.5
CDS-3UTR CCA 90 bp CCCCTGGGCACTCGGTCCCAGTTGGTCCCTATACCCGCCCCTATTAAACCAAAATCGTTGTCGAGCCGCTaGAGGGGCATCCGAGGGTGC +
Preference number: 4 (lower is better)
Translates to: PLGTRSQLVPIPAPIKPKSLSSR*RGIRGC
Trigger: GCACCCTCGGATGCCCCTCCAGCGGCTCGACAACGA...TTTTGGTTTAATAGGGGCGGGTATAGGGACCAACTGGGACCGAGTGCCCAGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000274811.9
CDS-3UTR CCA 90 bp AGGGATGTGCTGGCCTGTAGGCAAGGGGAAGCCTTGGGTCGTCACTGTGGTGACTGCAGGCGGTATCTCTaGGTGCTCAGTCTCCGTGGC +
Preference number: 4 (lower is better)
Translates to: RDVLACRQGEALGRHCGDCRRYL*VLSLRG
Trigger: GCCACGGAGACTGAGCACCCAGAGATACCGCCTGCA...GTCACCACAGTGACGACCCAAGGCTTCCCCTTGCCTACAGGCCAGCACATCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513029.5
CDS-3UTR CCA 90 bp GCTTGGCAAATGCAGGGGCTTATTGCAGGGACTCCTCGCTGGGCTGACCCTGGCCCTTCTGACCCAGGATaGTGCTCTGTCTGCCCATCC +
Preference number: 4 (lower is better)
Translates to: AWQMQGLIAGTPRWADPGPSDPG*CSVCPS
Trigger: GGATGGGCAGACAGAGCACCATCCTGGGTCAGAAGG...GCCAGGGTCAGCCCAGCGAGGAGTCCCTGCAATAAGCCCCTGCATTTGCCAAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274811.9
CDS-3UTR CCA 90 bp ACCTGCTCGTGGAGATCAACCATGAACGGGCTCTGCTGGGTGGCTGGGTGCAGCTCACAACCTGTGTCATaGTCCCCTCCTCGGGGACAG +
Preference number: 4 (lower is better)
Translates to: TCSWRSTMNGLCWVAGCSSQPVS*SPPRGQ
Trigger: CTGTCCCCGAGGAGGGGACCATGACACAGGTTGTGA...GCTGCACCCAGCCACCCAGCAGAGCCCGTTCATGGTTGATCTCCACGAGCAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513029.5
3UTR CAA 72 bp TTAAAGCGGTACGACGGGAGCTGCTCTATGTCTGCTTaGGTGAGACCCCGGGGCTTGGCATCTCCCAGCCGC +
Preference number: 4 (lower is better)
Translates to: LKRYDGSCSMSA*VRPRGLASPSR
Trigger: GCGGCTGGGAGATGCCAAGCCCCGGGGTCTCACCAAAGCAGACATAGAGCAGCTCCCGTCGTACCGCTTTAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513029.5
CDS-3UTR TCA 90 bp CCAGGGATGTGCTGGCCTGTAGGCAAGGGGAAGCCTTGGGTCGTCACTGTGGTGGGTAATGCTGCCCACTaGACATCACGGAGCATGCTG +
Preference number: 4 (lower is better)
Translates to: PGMCWPVGKGKPWVVTVVGNAAH*TSRSML
Trigger: CAGCATGCTCCGTGATGTTCAGTGGGCAGCATTACC...CACCACAGTGACGACCCAAGGCTTCCCCTTGCCTACAGGCCAGCACATCCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504160.1
ENST00000513029.5
CDS-3UTR TCA 90 bp GAGGCAGCAGAGGGGGTAATGCTGCCCACTGAACATCACGGAGCATGCTGGGAGCTATGTCTGCTTTGGTaGGACCCCGGGGCTTGGCAT +
Preference number: 4 (lower is better)
Translates to: EAAEGVMLPTEHHGACWELCLLW*DPGAWH
Trigger: ATGCCAAGCCCCGGGGTCTCACCAAAGCAGACATAG...CTCCCAGCATGCTCCGTGATGTTCAGTGGGCAGCATTACCCCCTCTGCTGCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000513029.5
CDS-3UTR TCA 90 bp TGCTCGTGGAGATCAACCATGAACGGGCTCTGCTGGGTGGCTGGGTGCAGCATTGAAGTGCAATGGGTCTaGCCTCTGACGGGGCGAGAG +
Preference number: 4 (lower is better)
Translates to: CSWRSTMNGLCWVAGCSIEVQWV*PLTGRE
Trigger: CTCTCGCCCCGTCAGAGGTCAGACCCATTGCACTTC...AATGCTGCACCCAGCCACCCAGCAGAGCCCGTTCATGGTTGATCTCCACGAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513029.5
CDS-3UTR GCA 90 bp GCATCATGTGAGAATATGGCACACCAAAGGACAGCTCCTGGTGCAGCGGATCGTAGAGCTGGCCCGGGGTaGTGCCAGGTCCCGCAGAGA +
Preference number: 4 (lower is better)
Translates to: ASCENMAHQRTAPGAADRRAGPG*CQVPQR
Trigger: TCTCTGCGGGACCTGGCAGCACCCCGGGCCAGCTCT...ACGATCCGCTGCACCAGGAGCTGTCCTTTGGTGTGCCATATTCTCACATGATGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513029.5
CDS-3UTR GCA 90 bp ATCTCCCAGCCGCTCGGCCAGGTTCAGGAGGGCCTCATAGTTCTCCATCTCCACGGTCCCTGGTGCACCTaGTCGTGGAGATCAACCATG +
Preference number: 4 (lower is better)
Translates to: ISQPLGQVQEGLIVLHLHGPWCT*SWRSTM
Trigger: CATGGTTGATCTCCACGAGCAGGTGCACCAGGGACC...GTGGAGATGGAGAACTATGAGGCCCTCCTGAACCTGGCCGAGCGGCTGGGAGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513029.5
CDS-3UTR GCA 90 bp GAGGCAGCAGAGGGGGTAATGCTGCCCACTGAACATCACGGAGCATGCTGGGAGGGCGGTATCTCTGGGTaGTCAGTCTCCGTGGCATCA +
Preference number: 4 (lower is better)
Translates to: EAAEGVMLPTEHHGACWEGGISG*SVSVAS
Trigger: TGATGCCACGGAGACTGAGCACCCAGAGATACCGCC...CTCCCAGCATGCTCCGTGATGTTCAGTGGGCAGCATTACCCCCTCTGCTGCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000513029.5
CDS-3UTR GCA 90 bp TCCCTGGTGCACCTGCTCGTGGAGATCAACCATGAACGGGCTCTGCTGGGTGGCCGGTACGACGGGAGCTaGTCTATGTCTGCTTTGGTG +
Preference number: 4 (lower is better)
Translates to: SLVHLLVEINHERALLGGRYDGS*SMSALV
Trigger: CACCAAAGCAGACATAGAGCAGCTCCCGTCGTACCG...GCCACCCAGCAGAGCCCGTTCATGGTTGATCTCCACGAGCAGGTGCACCAGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513029.5
CDS-3UTR GCA 90 bp GAAAAGCGTCGGGTCCCGGTAGGCTCTAGGGACGTGTGCAGTACAGTGCATGGCAATGCAGGGGCTTATTaGAGGGACTCCTCGCTGGGC +
Preference number: 4 (lower is better)
Translates to: EKRRVPVGSRDVCSTVHGNAGAY*RDSSLG
Trigger: GCCCAGCGAGGAGTCCCTGCAATAAGCCCCTGCATT...GCCATGCACTGTACTGCACACGTCCCTAGAGCCTACCGGGACCCGACGCTTTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274811.9
CDS-3UTR CCA 90 bp TGGAGATCAACCATGAACGGGCTCTGCTGGGTGGCTGGGTGCAGCATTCGGGGGTGGTGCACCTGCTCGTaGAGATCAACCATGAACGGG +
Preference number: 4 (lower is better)
Translates to: WRSTMNGLCWVAGCSIRGWCTCS*RSTMNG
Trigger: CCCGTTCATGGTTGATCTCCACGAGCAGGTGCACCA...CCCCCGAATGCTGCACCCAGCCACCCAGCAGAGCCCGTTCATGGTTGATCTCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000504160.1
ENST00000513029.5
CDS-3UTR CCA 90 bp CGCAGGTCCACGTCGTTGTCGAGCCGCTGGAGGGGCATCCGAGGGTGCTGGGTCCATCATGTGAGAATATaGCACACCAAAGGACAGCTC +
Preference number: 4 (lower is better)
Translates to: RRSTSLSSRWRGIRGCWVHHVRI*HTKGQL
Trigger: GAGCTGTCCTTTGGTGTGCCATATTCTCACATGATG...GACCCAGCACCCTCGGATGCCCCTCCAGCGGCTCGACAACGACGTGGACCTGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513029.5
CDS-3UTR CCA 90 bp GAAAAGCGTCGGGTCCCGGTAGGCTCTAGGGACGTGTGCAGTACAGTGCATGGCCTGGGGCTCAGGAAATaGCTCGTGACACCGTCTGTC +
Preference number: 4 (lower is better)
Translates to: EKRRVPVGSRDVCSTVHGLGLRK*LVTPSV
Trigger: GACAGACGGTGTCACGAGCCATTTCCTGAGCCCCAG...GCCATGCACTGTACTGCACACGTCCCTAGAGCCTACCGGGACCCGACGCTTTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274811.9
CDS-3UTR CCA 90 bp GCTAGGATGTGCCGGCCCCACACGCAGTTCGTTCAGGGCAGCAACCCCAGCTGGGTGCAGTACAGTGCATaGCAGTTATCAGCTGAGCAC +
Preference number: 4 (lower is better)
Translates to: ARMCRPHTQFVQGSNPSWVQYSA*QLSAEH
Trigger: GTGCTCAGCTGATAACTGCCATGCACTGTACTGCAC...CCAGCTGGGGTTGCTGCCCTGAACGAACTGCGTGTGGGGCCGGCACATCCTAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274811.9
CDS-3UTR CCA 90 bp GAAAAGCGTCGGGTCCCGGTAGGCTCTAGGGACGTGTGCAGTACAGTGCATGGCACCAGGGAAAGTGGGTaGGAAGCTCAGCCAGACCCT +
Preference number: 4 (lower is better)
Translates to: EKRRVPVGSRDVCSTVHGTRESG*EAQPDP
Trigger: AGGGTCTGGCTGAGCTTCCCACCCACTTTCCCTGGT...GCCATGCACTGTACTGCACACGTCCCTAGAGCCTACCGGGACCCGACGCTTTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274811.9
CDS-3UTR CCA 90 bp GGCATCCGAGGGTGCTGGGTCTGCAGAGACACAAACTGCCCCAGGGGCGCCATGGCGTCTTTAAAAAGCTaGTACGGCCCAGATTGCCCA +
Preference number: 4 (lower is better)
Translates to: GIRGCWVCRDTNCPRGAMASLKS*YGPDCP
Trigger: TGGGCAATCTGGGCCGTACCAGCTTTTTAAAGACGC...CATGGCGCCCCTGGGGCAGTTTGTGTCTCTGCAGACCCAGCACCCTCGGATGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000513029.5
3UTR CAA 72 bp AGGGAGTCTTTGGAGCTTGGCAAATGCAGGGGCTTATaGCAGGGACTCCTCGCTGGGCTGACCCTGGCACCA +
Preference number: 4 (lower is better)
Translates to: RESLELGKCRGL*QGLLAGLTLAP
Trigger: TGGTGCCAGGGTCAGCCCAGCGAGGAGTCCCTGCAATAAGCCCCTGCATTTGCCAAGCTCCAAAGACTCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274811.9
CDS-3UTR TCA 90 bp CACTCAGGCAGCTCCGTGGCGGGCGGGCAGGCAGGCAGACTAGGGAGGGAGTCTAACAAACCCCACATTTaGTTCACAACATTCGAAGCG +
Preference number: 4 (lower is better)
Translates to: HSGSSVAGGQAGRLGRESNKPHI*FTTFEA
Trigger: CGCTTCGAATGTTGTGAATCAAATGTGGGGTTTGTT...AGACTCCCTCCCTAGTCTGCCTGCCTGCCCGCCCGCCACGGAGCTGCCTGAGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274811.9
CDS-3UTR TCA 90 bp GGGGTAATGCTGCCCACTGAACATCACGGAGCATGCTGGGAGCTGCTGGGCACTGGTAATGCTGCCCACTaGACATCACGGAGCATGCTG +
Preference number: 4 (lower is better)
Translates to: GVMLPTEHHGACWELLGTGNAAH*TSRSML
Trigger: CAGCATGCTCCGTGATGTTCAGTGGGCAGCATTACC...AGTGCCCAGCAGCTCCCAGCATGCTCCGTGATGTTCAGTGGGCAGCATTACCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504160.1
ENST00000513029.5
CDS-3UTR TCA 90 bp GAAAAGCGTCGGGTCCCGGTAGGCTCTAGGGACGTGTGCAGTACAGTGCATGGCATGTTGTTCCTGGGATaGGGGTCCCCTAGGGAACCA +
Preference number: 4 (lower is better)
Translates to: EKRRVPVGSRDVCSTVHGMLFLG*GSPREP
Trigger: TGGTTCCCTAGGGGACCCTCATCCCAGGAACAACAT...GCCATGCACTGTACTGCACACGTCCCTAGAGCCTACCGGGACCCGACGCTTTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000274811.9
CDS-3UTR GCA 90 bp TCCGGGTTAAAGCGGTACGACGGGAGCTGCTCTATGTCTGCTTTGGTGAGACCCGGGACAGGTCCCTGGTaGACCTGCTCGTGGAGATCA +
Preference number: 4 (lower is better)
Translates to: SGLKRYDGSCSMSALVRPGTGPW*TCSWRS
Trigger: TGATCTCCACGAGCAGGTGCACCAGGGACCTGTCCC...GGGTCTCACCAAAGCAGACATAGAGCAGCTCCCGTCGTACCGCTTTAACCCGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513029.5
CDS-3UTR GCA 90 bp GAAAAGCGTCGGGTCCCGGTAGGCTCTAGGGACGTGTGCAGTACAGTGCATGGCCGGTACGACGGGAGCTaGTCTATGTCTGCTTTGGTG +
Preference number: 4 (lower is better)
Translates to: EKRRVPVGSRDVCSTVHGRYDGS*SMSALV
Trigger: CACCAAAGCAGACATAGAGCAGCTCCCGTCGTACCG...GCCATGCACTGTACTGCACACGTCCCTAGAGCCTACCGGGACCCGACGCTTTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274811.9
CDS-3UTR CCA 90 bp CGGGAACACAGGGCTCCCTCTCCCCGTATGGCCCAAGCCCCTCAGGATACGTGTAGGGGTTGGAGAGGGTaGTTCTGTGTAAAACACGTG +
Preference number: 4 (lower is better)
Translates to: REHRAPSPRMAQAPQDTCRGWRG*FCVKHV
Trigger: CACGTGTTTTACACAGAACCACCCTCTCCAACCCCT...ACACGTATCCTGAGGGGCTTGGGCCATACGGGGAGAGGGAGCCCTGTGTTCCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000274811.9
CDS-3UTR TCA 90 bp TCCGGGTTAAAGCGGTACGACGGGAGCTGCTCTATGTCTGCTTTGGTGAGACCCAGCGTCTGCTCCGACTaGTGGCTGTCCGGGTTAAAG +
Preference number: 4 (lower is better)
Translates to: SGLKRYDGSCSMSALVRPSVCSD*WLSGLK
Trigger: CTTTAACCCGGACAGCCATCAGTCGGAGCAGACGCT...GGGTCTCACCAAAGCAGACATAGAGCAGCTCCCGTCGTACCGCTTTAACCCGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513029.5
CDS-3UTR TCA 90 bp CGCAGTTCGTTCAGGGCAGCAACCCCAGCTGGGTATAGGACAAGAAAGGATTGGGCGCCTCGAAGTCACTaGAGCAGACCACACACAGCG +
Preference number: 4 (lower is better)
Translates to: RSSFRAATPAGYRTRKDWAPRSH*SRPHTA
Trigger: CGCTGTGTGTGGTCTGCTTCAGTGACTTCGAGGCGC...CCAATCCTTTCTTGTCCTATACCCAGCTGGGGTTGCTGCCCTGAACGAACTGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274811.9
CDS-3UTR TCA 90 bp GGCCAGGTTCAGGAGGGCCTCATAGTTCTCCATCTCCACATCATCCACGTCCAGGGACAGGGTGCCGCCTaGGATACTGAAGTGCAATGG +
Preference number: 4 (lower is better)
Translates to: GQVQEGLIVLHLHIIHVQGQGAA*DTEVQW
Trigger: CCATTGCACTTCAGTATCTCAGGCGGCACCCTGTCC...CTGGACGTGGATGATGTGGAGATGGAGAACTATGAGGCCCTCCTGAACCTGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513029.5
CDS-3UTR GCA 90 bp CGCAGTTCGTTCAGGGCAGCAACCCCAGCTGGGTATAGGACAAGAAAGGATTGGGGGACAGGTCCCTGGTaGACCTGCTCGTGGAGATCA +
Preference number: 4 (lower is better)
Translates to: RSSFRAATPAGYRTRKDWGTGPW*TCSWRS
Trigger: TGATCTCCACGAGCAGGTGCACCAGGGACCTGTCCC...CCAATCCTTTCTTGTCCTATACCCAGCTGGGGTTGCTGCCCTGAACGAACTGCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000274811.9
CDS-3UTR GCA 90 bp CAGAGGGAGAGGAGATTGGGCACGGGTCTGGCTGCATCCCTGGGAGGGACAACCGGTAACTGTAAAATGTaGAAGGAACAGGGCCCCCAA +
Preference number: 4 (lower is better)
Translates to: QRERRLGTGLAASLGGTTGNCKM*KEQGPQ
Trigger: TTGGGGGCCCTGTTCCTTGCACATTTTACAGTTACC...GGTTGTCCCTCCCAGGGATGCAGCCAGACCCGTGCCCAATCTCCTCTCCCTCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000274811.9
CDS-3UTR CCA 90 bp CGCAGTTCGTTCAGGGCAGCAACCCCAGCTGGGTATAGGACAAGAAAGGATTGGAGAGGGACAGGTCCCTaGTGCACCTGCTCGTGGAGA +
Preference number: 4 (lower is better)
Translates to: RSSFRAATPAGYRTRKDWRGTGP*CTCSWR
Trigger: TCTCCACGAGCAGGTGCACCAGGGACCTGTCCCTCT...CCAATCCTTTCTTGTCCTATACCCAGCTGGGGTTGCTGCCCTGAACGAACTGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274811.9
CDS-3UTR CCA 90 bp CCCCTGGGCACTCGGTCCCAGTTGGTCCCTATACCCGCCCCTATTAAACCAAAAGCCTCCTCCAGAACTTaGAGGACAGGGATCAGGCTG +
Preference number: 4 (lower is better)
Translates to: PLGTRSQLVPIPAPIKPKASSRT*RTGIRL
Trigger: CAGCCTGATCCCTGTCCTCCAAGTTCTGGAGGAGGC...TTTTGGTTTAATAGGGGCGGGTATAGGGACCAACTGGGACCGAGTGCCCAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000274811.9
CDS-3UTR CCA 90 bp CGGGAACACAGGGCTCCCTCTCCCCGTATGGCCCAAGCCCCTCAGGATACGTGTTATACAGTAAGACTTTaGGTTCTCCATGGGGGTGGG +
Preference number: 4 (lower is better)
Translates to: REHRAPSPRMAQAPQDTCYTVRL*VLHGGG
Trigger: CCCACCCCCATGGAGAACCCAAAGTCTTACTGTATA...ACACGTATCCTGAGGGGCTTGGGCCATACGGGGAGAGGGAGCCCTGTGTTCCCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000274811.9
CDS-3UTR CCA 90 bp CAGGATGTAGTGGTCACTGGAGATGAGGTGGGGGTAGGCCTGATAGGGCACAGGTGCCCAACAGACCAATaGCGGACCACCCATGCAAAC +
Preference number: 4 (lower is better)
Translates to: QDVVVTGDEVGVGLIGHRCPTDQ*RTTHAN
Trigger: GTTTGCATGGGTGGTCCGCCATTGGTCTGTTGGGCA...CCTGTGCCCTATCAGGCCTACCCCCACCTCATCTCCAGTGACCACTACATCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000513029.5
CDS-3UTR TCA 90 bp AGCATGACCGTGCTCGGCCCCCTGGGCACTCGGTCCCAGTTGGTCCCTATACCCTTTGGGCCAAATGAATaGACAAAAACTGCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: SMTVLGPLGTRSQLVPIPFGPNE*TKTAAP
Trigger: AGGAGCAGCAGTTTTTGTTCATTCATTTGGCCCAAA...GGGTATAGGGACCAACTGGGACCGAGTGCCCAGGGGGCCGAGCACGGTCATGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000274811.9
CDS-3UTR GCA 90 bp CGCAGTTCGTTCAGGGCAGCAACCCCAGCTGGGTATAGGACAAGAAAGGATTGGGGCGGTATCTCTGGGTaGTCAGTCTCCGTGGCATCA +
Preference number: 4 (lower is better)
Translates to: RSSFRAATPAGYRTRKDWGGISG*SVSVAS
Trigger: TGATGCCACGGAGACTGAGCACCCAGAGATACCGCC...CCAATCCTTTCTTGTCCTATACCCAGCTGGGGTTGCTGCCCTGAACGAACTGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274811.9
CDS-3UTR GCA 90 bp CGCAGTTCGTTCAGGGCAGCAACCCCAGCTGGGTATAGGACAAGAAAGGATTGGGGCTGGAGGGAGAAATaGCCTGAAAAGCGTCGGGTC +
Preference number: 4 (lower is better)
Translates to: RSSFRAATPAGYRTRKDWGWREK*PEKRRV
Trigger: GACCCGACGCTTTTCAGGGCATTTCTCCCTCCAGCC...CCAATCCTTTCTTGTCCTATACCCAGCTGGGGTTGCTGCCCTGAACGAACTGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000274811.9
CDS-3UTR CCA 90 bp CCCCTGGGCACTCGGTCCCAGTTGGTCCCTATACCCGCCCCTATTAAACCAAAATGGTGCACCTGCTCGTaGAGATCAACCATGAACGGG +
Preference number: 4 (lower is better)
Translates to: PLGTRSQLVPIPAPIKPKWCTCS*RSTMNG
Trigger: CCCGTTCATGGTTGATCTCCACGAGCAGGTGCACCA...TTTTGGTTTAATAGGGGCGGGTATAGGGACCAACTGGGACCGAGTGCCCAGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000274811.9
CDS-3UTR CCA 90 bp GAAAAGCGTCGGGTCCCGGTAGGCTCTAGGGACGTGTGCAGTACAGTGCATGGCCCAATAGCTGCTTGTTaGAATCACTGCTGCAGCCGA +
Preference number: 4 (lower is better)
Translates to: EKRRVPVGSRDVCSTVHGPIAAC*NHCCSR
Trigger: TCGGCTGCAGCAGTGATTCCAACAAGCAGCTATTGG...GCCATGCACTGTACTGCACACGTCCCTAGAGCCTACCGGGACCCGACGCTTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274811.9
CDS-3UTR TCA 90 bp GCTAGGATGTGCCGGCCCCACACGCAGTTCGTTCAGGGCAGCAACCCCAGCTGGTGCTACAAACCAATGTaGATCCCATGGAATGGAAAA +
Preference number: 4 (lower is better)
Translates to: ARMCRPHTQFVQGSNPSWCYKPM*IPWNGK
Trigger: TTTTCCATTCCATGGGATTCACATTGGTTTGTAGCA...CCAGCTGGGGTTGCTGCCCTGAACGAACTGCGTGTGGGGCCGGCACATCCTAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274811.9
CDS-3UTR TCA 90 bp TCCGGGTTAAAGCGGTACGACGGGAGCTGCTCTATGTCTGCTTTGGTGAGACCCCTCCGTGGCATCATGTaGGAATATGGCACACCAAAG +
Preference number: 4 (lower is better)
Translates to: SGLKRYDGSCSMSALVRPLRGIM*EYGTPK
Trigger: CTTTGGTGTGCCATATTCTCACATGATGCCACGGAG...GGGTCTCACCAAAGCAGACATAGAGCAGCTCCCGTCGTACCGCTTTAACCCGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513029.5
CDS-3UTR CCA 90 bp CAGAAGTTGGTAAATAAGAGAGTAAACAATGGCAAGCCCCCACCACAGGAAATCCGACGGGGAAAGGGCTaGGCCAGGCGCAGAGGTGGA +
Preference number: 4 (lower is better)
Translates to: QKLVNKRVNNGKPPPQEIRRGKG*ARRRGG
Trigger: TCCACCTCTGCGCCTGGCCCAGCCCTTTCCCCGTCG...GATTTCCTGTGGTGGGGGCTTGCCATTGTTTACTCTCTTATTTACCAACTTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000274811.9
CDS-3UTR CCA 90 bp GAAAAGCGTCGGGTCCCGGTAGGCTCTAGGGACGTGTGCAGTACAGTGCATGGCCATCATGTGAGAATATaGCACACCAAAGGACAGCTC +
Preference number: 4 (lower is better)
Translates to: EKRRVPVGSRDVCSTVHGHHVRI*HTKGQL
Trigger: GAGCTGTCCTTTGGTGTGCCATATTCTCACATGATG...GCCATGCACTGTACTGCACACGTCCCTAGAGCCTACCGGGACCCGACGCTTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274811.9
CDS-3UTR CCA 90 bp CAGAAGTTGGTAAATAAGAGAGTAAACAATGGCAAGCCCCCACCACAGGAAATCTCTGTCTGCCCATCCTaGGGCCAAGGATCTCCACCG +
Preference number: 4 (lower is better)
Translates to: QKLVNKRVNNGKPPPQEISVCPS*GQGSPP
Trigger: CGGTGGAGATCCTTGGCCCCAGGATGGGCAGACAGA...GATTTCCTGTGGTGGGGGCTTGCCATTGTTTACTCTCTTATTTACCAACTTCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000274811.9
CDS-3UTR CCA 90 bp GCTATAAATATAGAAACGTCACCTGGAGTTATATACAGTAAGACTTTGGGTTCTGGCTGGGGCGGGAGGTaGGAGCCAGGGCCACTGCGA +
Preference number: 4 (lower is better)
Translates to: AINIETSPGVIYSKTLGSGWGGR*EPGPLR
Trigger: TCGCAGTGGCCCTGGCTCCCACCTCCCGCCCCAGCC...AGAACCCAAAGTCTTACTGTATATAACTCCAGGTGACGTTTCTATATTTATAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274811.9
3UTR CAA 72 bp ATAGAAACGTCACCTGGAGTTATATACAGTAAGACTTaGGGTTCTCCATGGGGGTGGGACCAGGCTGACGGG +
Preference number: 4 (lower is better)
Translates to: IETSPGVIYSKT*GSPWGWDQADG
Trigger: CCCGTCAGCCTGGTCCCACCCCCATGGAGAACCCAAAGTCTTACTGTATATAACTCCAGGTGACGTTTCTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000274811.9
CDS-3UTR CCA 90 bp GCTATAAATATAGAAACGTCACCTGGAGTTATATACAGTAAGACTTTGGGTTCTCGTCGGCCCGGCAGATaGGACACGTCCGGTTGGCCT +
Preference number: 4 (lower is better)
Translates to: AINIETSPGVIYSKTLGSRRPGR*DTSGWP
Trigger: AGGCCAACCGGACGTGTCCCATCTGCCGGGCCGACG...AGAACCCAAAGTCTTACTGTATATAACTCCAGGTGACGTTTCTATATTTATAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274811.9
CDS-3UTR CCA 90 bp GCTATAAATATAGAAACGTCACCTGGAGTTATATACAGTAAGACTTTGGGTTCTGGTTCTCCATGGGGGTaGGACCAGGCTGACGGGCCC +
Preference number: 4 (lower is better)
Translates to: AINIETSPGVIYSKTLGSGSPWG*DQADGP
Trigger: GGGCCCGTCAGCCTGGTCCCACCCCCATGGAGAACC...AGAACCCAAAGTCTTACTGTATATAACTCCAGGTGACGTTTCTATATTTATAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000274811.9
CDS-3UTR CCA 90 bp GCTATAAATATAGAAACGTCACCTGGAGTTATATACAGTAAGACTTTGGGTTCTATTCGCCCAGGCAGGTaGGAGTTGGGCCCTGGCTGG +
Preference number: 4 (lower is better)
Translates to: AINIETSPGVIYSKTLGSIRPGR*ELGPGW
Trigger: CCAGCCAGGGCCCAACTCCCACCTGCCTGGGCGAAT...AGAACCCAAAGTCTTACTGTATATAACTCCAGGTGACGTTTCTATATTTATAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274811.9
CDS-3UTR CCA 90 bp GCTATAAATATAGAAACGTCACCTGGAGTTATATACAGTAAGACTTTGGGTTCTAGCTCGGGATTAGGCTaGGACGCCCTCCAGCCTGAG +
Preference number: 4 (lower is better)
Translates to: AINIETSPGVIYSKTLGSSSGLG*DALQPE
Trigger: CTCAGGCTGGAGGGCGTCCCAGCCTAATCCCGAGCT...AGAACCCAAAGTCTTACTGTATATAACTCCAGGTGACGTTTCTATATTTATAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274811.9
CDS-3UTR GCA 90 bp GCTATAAATATAGAAACGTCACCTGGAGTTATATACAGTAAGACTTTGGGTTCTAGGGGCATCCGAGGGTaGTGGGTCTGCAGAGACACA +
Preference number: 4 (lower is better)
Translates to: AINIETSPGVIYSKTLGSRGIRG*WVCRDT
Trigger: TGTGTCTCTGCAGACCCAGCACCCTCGGATGCCCCT...AGAACCCAAAGTCTTACTGTATATAACTCCAGGTGACGTTTCTATATTTATAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274811.9
CDS-3UTR GCA 90 bp GCTATAAATATAGAAACGTCACCTGGAGTTATATACAGTAAGACTTTGGGTTCTCCCTCAGGATACGTGTaGCCCAGCTCGGGATTAGGC +
Preference number: 4 (lower is better)
Translates to: AINIETSPGVIYSKTLGSPSGYV*PSSGLG
Trigger: GCCTAATCCCGAGCTGGGGCACACGTATCCTGAGGG...AGAACCCAAAGTCTTACTGTATATAACTCCAGGTGACGTTTCTATATTTATAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274811.9
CDS-3UTR CCA 90 bp GCTATAAATATAGAAACGTCACCTGGAGTTATATACAGTAAGACTTTGGGTTCTCATCACGGAGCATGCTaGGAGCTGCTGGGCACTGCA +
Preference number: 4 (lower is better)
Translates to: AINIETSPGVIYSKTLGSHHGAC*ELLGTA
Trigger: TGCAGTGCCCAGCAGCTCCCAGCATGCTCCGTGATG...AGAACCCAAAGTCTTACTGTATATAACTCCAGGTGACGTTTCTATATTTATAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274811.9
CDS-3UTR CCA 90 bp GCTATAAATATAGAAACGTCACCTGGAGTTATATACAGTAAGACTTTGGGTTCTTGCAGGCGGTATCTCTaGGTGCTCAGTCTCCGTGGC +
Preference number: 4 (lower is better)
Translates to: AINIETSPGVIYSKTLGSCRRYL*VLSLRG
Trigger: GCCACGGAGACTGAGCACCCAGAGATACCGCCTGCA...AGAACCCAAAGTCTTACTGTATATAACTCCAGGTGACGTTTCTATATTTATAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274811.9
CDS-3UTR TCA 90 bp GCTATAAATATAGAAACGTCACCTGGAGTTATATACAGTAAGACTTTGGGTTCTCTATGTCTGCTTTGGTaGGACCCCGGGGCTTGGCAT +
Preference number: 4 (lower is better)
Translates to: AINIETSPGVIYSKTLGSLCLLW*DPGAWH
Trigger: ATGCCAAGCCCCGGGGTCTCACCAAAGCAGACATAG...AGAACCCAAAGTCTTACTGTATATAACTCCAGGTGACGTTTCTATATTTATAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274811.9
CDS-3UTR TCA 90 bp GCTATAAATATAGAAACGTCACCTGGAGTTATATACAGTAAGACTTTGGGTTCTGGTAATGCTGCCCACTaGACATCACGGAGCATGCTG +
Preference number: 4 (lower is better)
Translates to: AINIETSPGVIYSKTLGSGNAAH*TSRSML
Trigger: CAGCATGCTCCGTGATGTTCAGTGGGCAGCATTACC...AGAACCCAAAGTCTTACTGTATATAACTCCAGGTGACGTTTCTATATTTATAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274811.9
CDS-3UTR GCA 90 bp GCTATAAATATAGAAACGTCACCTGGAGTTATATACAGTAAGACTTTGGGTTCTGGCTCTAGGGACGTGTaGAGTACAGTGCATGGCAGT +
Preference number: 4 (lower is better)
Translates to: AINIETSPGVIYSKTLGSGSRDV*STVHGS
Trigger: ACTGCCATGCACTGTACTGCACACGTCCCTAGAGCC...AGAACCCAAAGTCTTACTGTATATAACTCCAGGTGACGTTTCTATATTTATAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274811.9
CDS-3UTR CCA 90 bp GCTATAAATATAGAAACGTCACCTGGAGTTATATACAGTAAGACTTTGGGTTCTTGGTCCCCATCCTCCTaGGACTTCCTTGGAGGAGAT +
Preference number: 4 (lower is better)
Translates to: AINIETSPGVIYSKTLGSWSPSS*DFLGGD
Trigger: ATCTCCTCCAAGGAAGTCCCAGGAGGATGGGGACCA...AGAACCCAAAGTCTTACTGTATATAACTCCAGGTGACGTTTCTATATTTATAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274811.9
CDS-3UTR GCA 90 bp GCTATAAATATAGAAACGTCACCTGGAGTTATATACAGTAAGACTTTGGGTTCTGCTTGTTGGAATCACTaGTGCAGCCGACACACAATC +
Preference number: 4 (lower is better)
Translates to: AINIETSPGVIYSKTLGSACWNH*CSRHTI
Trigger: GATTGTGTGTCGGCTGCAGCAGTGATTCCAACAAGC...AGAACCCAAAGTCTTACTGTATATAACTCCAGGTGACGTTTCTATATTTATAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274811.9
CDS-3UTR GCA 90 bp GCTATAAATATAGAAACGTCACCTGGAGTTATATACAGTAAGACTTTGGGTTCTGTGGGTTTTCAACACTaGTATAAATATAGAAACGTC +
Preference number: 4 (lower is better)
Translates to: AINIETSPGVIYSKTLGSVGFQH*YKYRNV
Trigger: GACGTTTCTATATTTATAGCAGTGTTGAAAACCCAC...AGAACCCAAAGTCTTACTGTATATAACTCCAGGTGACGTTTCTATATTTATAGC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274811.9
CDS CCA 90 bp ACGGCGGCTGCTGGGAGGGTAAGCGCTCATCCCGGGCAGGCGGGCTaGCCAGGGGGCCCTCGAGGCCAGGGCTTCCCCAGAGCTGGCCCG +
Preference number: 5 (lower is better)
Translates to: TAAAGRVSAHPGQAG*PGGPRGQGFPRAGP
Trigger: CGGGCCAGCTCTGGGGAAGCCCTGGCCTCGAGGGCCCCCTGGCCAGCCCGCCTGCCCGGGATGAGCGCTTACCCTCCCAGCAGCCGCCGT
77% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000274811.9
CDS CCA 90 bp CGGCGCTCCTCTACGGGGAGGTGTGGAGGTCGGGACGGCGGCTGCTaGGAGGGTAAGCGCTCATCCCGGGCAGGCGGGCTGGCCAGGGGG +
Preference number: 5 (lower is better)
Translates to: RRSSTGRCGGRDGGC*EGKRSSRAGGLARG
Trigger: CCCCCTGGCCAGCCCGCCTGCCCGGGATGAGCGCTTACCCTCCCAGCAGCCGCCGTCCCGACCTCCACACCTCCCCGTAGAGGAGCGCCG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274811.9
ENST00000504434.1
CDS CCA 90 bp CAGAGCTGGCCCGGGGTGCTGCCAGGTCCCGCAGAGAATCGCCGCTaGCCCACGGGGGCGGAGGGTGGCCACCTAGTCACTGCCAGAGCC +
Preference number: 5 (lower is better)
Translates to: QSWPGVLPGPAENRR*PTGAEGGHLVTARA
Trigger: GGCTCTGGCAGTGACTAGGTGGCCACCCTCCGCCCCCGTGGGCCAGCGGCGATTCTCTGCGGGACCTGGCAGCACCCCGGGCCAGCTCTG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000274811.9
ENST00000504160.1
ENST00000504434.1
ENST00000513029.5
CDS-3UTR CAA 90 bp CTCACTCAGCCTCCCTGGGCACCTCGGAGGCGTCGGCCCGGCAGATGGGACACGGTGAGACCCCGGGGCTaGGCATCTCCCAGCCGCTCG +
Preference number: 5 (lower is better)
Translates to: LTQPPWAPRRRRPGRWDTVRPRG*ASPSRS
Trigger: CGAGCGGCTGGGAGATGCCAAGCCCCGGGGTCTCAC...CGTGTCCCATCTGCCGGGCCGACGCCTCCGAGGTGCCCAGGGAGGCTGAGTGAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000506378.1
ENST00000513029.5
CDS GCA 90 bp GGCTCCTTCCGGGGCCTCTCTCTTTGTTGTCCGCCCGACGGCGTCTaGCTCGCGAGGCCCACGCGCGATCAGTCTCTCTCGGCCCAGGCC +
Preference number: 5 (lower is better)
Translates to: GSFRGLSLCCPPDGV*LARPTRDQSLSAQA
Trigger: GGCCTGGGCCGAGAGAGACTGATCGCGCGTGGGCCTCGCGAGGCAGACGCCGTCGGGCGGACAACAAAGAGAGAGGCCCCGGAAGGAGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274811.9
ENST00000504160.1
CDS-3UTR CAA 90 bp CCCGATCAGGGACACTCAGGCAGCTCCGTGGCGGGCGGGCAGGCAGGCAGACTACGCAGGTCCACGTCGTaGTCGAGCCGCTGGAGGGGC +
Preference number: 5 (lower is better)
Translates to: PDQGHSGSSVAGGQAGRLRRSTS*SSRWRG
Trigger: GCCCCTCCAGCGGCTCGACAACGACGTGGACCTGCG...TAGTCTGCCTGCCTGCCCGCCCGCCACGGAGCTGCCTGAGTGTCCCTGATCGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274811.9
CDS GCA 90 bp CCCTGGGCCGGCCACCTTCCCGGAGATGACGTCACCCCCAAGAGCTaGAGCACCGCGCTGACATCATGGCCCGGCCGCCCCACTTCTCCT +
Preference number: 5 (lower is better)
Translates to: PWAGHLPGDDVTPKS*STALTSWPGRPTSP
Trigger: AGGAGAAGTGGGGCGGCCGGGCCATGATGTCAGCGCGGTGCTGCAGCTCTTGGGGGTGACGTCATCTCCGGGAAGGTGGCCGGCCCAGGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000513029.5
CDS CCA 90 bp TGGGCACCTCGGAGGCGTCGGCCCGGCAGATGGGACACGTCCGGTTaGCCTGTGGGAACATGCACGTCAGGCGTTGCTCTCACCAGCCCC +
Preference number: 5 (lower is better)
Translates to: WAPRRRRPGRWDTSG*PVGTCTSGVALTSP
Trigger: GGGGCTGGTGAGAGCAACGCCTGACGTGCATGTTCCCACAGGCCAACCGGACGTGTCCCATCTGCCGGGCCGACGCCTCCGAGGTGCCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506378.1
CDS-3UTR CAA 90 bp CTGGGTGGCTGGGTGCAGCATTCGGGGGCTCCCGCCGGCAGGAGCCGAGGCTCGTGCTCTATGTCTGCTTaGGTGAGACCCCGGGGCTTG +
Preference number: 5 (lower is better)
Translates to: LGGWVQHSGAPAGRSRGSCSMSA*VRPRGL
Trigger: CAAGCCCCGGGGTCTCACCAAAGCAGACATAGAGCA...CGAGCCTCGGCTCCTGCCGGCGGGAGCCCCCGAATGCTGCACCCAGCCACCCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000513029.5
CDS-3UTR CAA 90 bp CTCACTCAGCCTCCCTGGGCACCTCGGAGGCGTCGGCCCGGCAGATGGGACACGCATGCACGTCAGGCGTaGCTCTCACCAGCCCCAACC +
Preference number: 5 (lower is better)
Translates to: LTQPPWAPRRRRPGRWDTHARQA*LSPAPT
Trigger: GGTTGGGGCTGGTGAGAGCAACGCCTGACGTGCATG...CGTGTCCCATCTGCCGGGCCGACGCCTCCGAGGTGCCCAGGGAGGCTGAGTGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506378.1
CDS-3UTR CAA 90 bp CTCAGCCTCCCTGGGCACCTCGGAGGCGTCGGCCCGGCAGATGGGACACGTCCGATGGGACACGTCCGGTaGGCCTGTGGGAACATGCAC +
Preference number: 5 (lower is better)
Translates to: LSLPGHLGGVGPADGTRPMGHVR*ACGNMH
Trigger: GTGCATGTTCCCACAGGCCAACCGGACGTGTCCCAT...CGGACGTGTCCCATCTGCCGGGCCGACGCCTCCGAGGTGCCCAGGGAGGCTGAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506378.1
CDS CCA 90 bp TACCTGCTCGTGGAGATCAACCATGAACGGGCTCTGCTGGGTGGCTaGGTGCAGCATTCGGGGGCTCCCGCCGGCAGGAGCCGAGGCTCG +
Preference number: 5 (lower is better)
Translates to: YLLVEINHERALLGG*VQHSGAPAGRSRGS
Trigger: CGAGCCTCGGCTCCTGCCGGCGGGAGCCCCCGAATGCTGCACCCAGCCACCCAGCAGAGCCCGTTCATGGTTGATCTCCACGAGCAGGTA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000504434.1
CDS CCA 90 bp CTCGGAGGCGTCGGCCCGGCAGATGGGACACGTCCGGTTGGCCTGTaGGAACATGCACGTCAGGCGTTGCTCTCACCAGCCCCAACCCAC +
Preference number: 5 (lower is better)
Translates to: LGGVGPADGTRPVGL*EHARQALLSPAPTH
Trigger: GTGGGTTGGGGCTGGTGAGAGCAACGCCTGACGTGCATGTTCCCACAGGCCAACCGGACGTGTCCCATCTGCCGGGCCGACGCCTCCGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506378.1
CDS CCA 90 bp CTCACTCAGCCTCCCTGGGCACCTCGGAGGCGTCGGCCCGGCAGATaGGACACGTCCGGTTGGCCTGTGGGAACATGCACGTCAGGCGTT +
Preference number: 5 (lower is better)
Translates to: LTQPPWAPRRRRPGR*DTSGWPVGTCTSGV
Trigger: AACGCCTGACGTGCATGTTCCCACAGGCCAACCGGACGTGTCCCATCTGCCGGGCCGACGCCTCCGAGGTGCCCAGGGAGGCTGAGTGAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506378.1
CDS-3UTR CAA 90 bp CTCAGCCTCCCTGGGCACCTCGGAGGCGTCGGCCCGGCAGATGGGACACGTCCGTGCTCTATGTCTGCTTaGGTGAGACCCCGGGGCTTG +
Preference number: 5 (lower is better)
Translates to: LSLPGHLGGVGPADGTRPCSMSA*VRPRGL
Trigger: CAAGCCCCGGGGTCTCACCAAAGCAGACATAGAGCA...CGGACGTGTCCCATCTGCCGGGCCGACGCCTCCGAGGTGCCCAGGGAGGCTGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000506378.1
ENST00000513029.5
CDS GCA 90 bp GGGGTTCTGCCTACCTGCTCGTGGAGATCAACCATGAACGGGCTCTaGTGGGTGGCTGGGTGCAGCATTCGGGGGCTCCCGCCGGCAGGA +
Preference number: 5 (lower is better)
Translates to: GVLPTCSWRSTMNGL*WVAGCSIRGLPPAG
Trigger: TCCTGCCGGCGGGAGCCCCCGAATGCTGCACCCAGCCACCCAGCAGAGCCCGTTCATGGTTGATCTCCACGAGCAGGTAGGCAGAACCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000504434.1
CDS CCA 90 bp GTTCTGCCTACCTGCTCGTGGAGATCAACCATGAACGGGCTCTGCTaGGTGGCTGGGTGCAGCATTCGGGGGCTCCCGCCGGCAGGAGCC +
Preference number: 5 (lower is better)
Translates to: VLPTCSWRSTMNGLC*VAGCSIRGLPPAGA
Trigger: GGCTCCTGCCGGCGGGAGCCCCCGAATGCTGCACCCAGCCACCCAGCAGAGCCCGTTCATGGTTGATCTCCACGAGCAGGTAGGCAGAAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000504434.1
CDS-3UTR CAA 90 bp GCTAGGATGTGCCGGCCCCACACGCAGTTCGTTCAGGGCAGCAACCCCAGCTGGGGGACTCACAACCCTTaGGCCGCCCGGCCACACGTT +
Preference number: 5 (lower is better)
Translates to: ARMCRPHTQFVQGSNPSWGTHNP*AARPHV
Trigger: AACGTGTGGCCGGGCGGCCAAAGGGTTGTGAGTCCC...CCAGCTGGGGTTGCTGCCCTGAACGAACTGCGTGTGGGGCCGGCACATCCTAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000274811.9
CDS-3UTR CAA 90 bp TGGAGATCAACCATGAACGGGCTCTGCTGGGTGGCTGGGTGCAGCATTCGGGGGCGCAGGTCCACGTCGTaGTCGAGCCGCTGGAGGGGC +
Preference number: 5 (lower is better)
Translates to: WRSTMNGLCWVAGCSIRGRRSTS*SSRWRG
Trigger: GCCCCTCCAGCGGCTCGACAACGACGTGGACCTGCG...CCCCCGAATGCTGCACCCAGCCACCCAGCAGAGCCCGTTCATGGTTGATCTCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000513029.5
CDS-3UTR CAA 90 bp CTGGGCACCTCGGAGGCGTCGGCCCGGCAGATGGGACACGTCCGGTTGGCCTGTTGGGCCCCATTGCTGTaGGTGACATTGGCAGCATCG +
Preference number: 5 (lower is better)
Translates to: LGTSEASARQMGHVRLACWAPLL*VTLAAS
Trigger: CGATGCTGCCAATGTCACCAACAGCAATGGGGCCCA...ACAGGCCAACCGGACGTGTCCCATCTGCCGGGCCGACGCCTCCGAGGTGCCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506378.1
CDS-3UTR CAA 90 bp AGGATGTGCCGGCCCCACACGCAGTTCGTTCAGGGCAGCAACCCCAGCTGGGTAGGGCCTCTCTCTTTGTaGTCCGCCCGACGGCGTCTG +
Preference number: 5 (lower is better)
Translates to: RMCRPHTQFVQGSNPSWVGPLSL*SARRRL
Trigger: CAGACGCCGTCGGGCGGACAACAAAGAGAGAGGCCC...TACCCAGCTGGGGTTGCTGCCCTGAACGAACTGCGTGTGGGGCCGGCACATCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274811.9
CDS-3UTR CAA 90 bp GCTAGGATGTGCCGGCCCCACACGCAGTTCGTTCAGGGCAGCAACCCCAGCTGGCCGCCCGGCCACACGTaGACTCCTTTGTTCCCGATC +
Preference number: 5 (lower is better)
Translates to: ARMCRPHTQFVQGSNPSWPPGHT*TPLFPI
Trigger: GATCGGGAACAAAGGAGTCAACGTGTGGCCGGGCGG...CCAGCTGGGGTTGCTGCCCTGAACGAACTGCGTGTGGGGCCGGCACATCCTAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274811.9
CDS-3UTR CAA 90 bp GAGGCAGCAGAGGGGGTAATGCTGCCCACTGAACATCACGGAGCATGCTGGGAGGTGAGACCCCGGGGCTaGGCATCTCCCAGCCGCTCG +
Preference number: 5 (lower is better)
Translates to: EAAEGVMLPTEHHGACWEVRPRG*ASPSRS
Trigger: CGAGCGGCTGGGAGATGCCAAGCCCCGGGGTCTCAC...CTCCCAGCATGCTCCGTGATGTTCAGTGGGCAGCATTACCCCCTCTGCTGCCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000513029.5
CDS-3UTR CAA 90 bp CGGGAACACAGGGCTCCCTCTCCCCGTATGGCCCAAGCCCCTCAGGATACGTGTGGCACTCGGTCCCAGTaGGTCCCTATACCCGCCCCT +
Preference number: 5 (lower is better)
Translates to: REHRAPSPRMAQAPQDTCGTRSQ*VPIPAP
Trigger: AGGGGCGGGTATAGGGACCAACTGGGACCGAGTGCC...ACACGTATCCTGAGGGGCTTGGGCCATACGGGGAGAGGGAGCCCTGTGTTCCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000274811.9
CDS-3UTR CAA 90 bp CTCACTCAGCCTCCCTGGGCACCTCGGAGGCGTCGGCCCGGCAGATGGGACACGCCGCCCCACTTCTCCTaGTTTATACTACACGGCGTC +
Preference number: 5 (lower is better)
Translates to: LTQPPWAPRRRRPGRWDTPPHFS*FILHGV
Trigger: GACGCCGTGTAGTATAAACAAGGAGAAGTGGGGCGG...CGTGTCCCATCTGCCGGGCCGACGCCTCCGAGGTGCCCAGGGAGGCTGAGTGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513029.5
CDS-3UTR CAA 90 bp ACCTGCTCGTGGAGATCAACCATGAACGGGCTCTGCTGGGTGGCTGGGTGCAGCGGGCCTCTCTCTTTGTaGTCCGCCCGACGGCGTCTG +
Preference number: 5 (lower is better)
Translates to: TCSWRSTMNGLCWVAGCSGPLSL*SARRRL
Trigger: CAGACGCCGTCGGGCGGACAACAAAGAGAGAGGCCC...GCTGCACCCAGCCACCCAGCAGAGCCCGTTCATGGTTGATCTCCACGAGCAGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504160.1
CDS-3UTR CAA 90 bp GAGGCAGCAGAGGGGGTAATGCTGCCCACTGAACATCACGGAGCATGCTGGGAGCCGGGGCCTCTCTCTTaGTTGTCCGCCCGACGGCGT +
Preference number: 5 (lower is better)
Translates to: EAAEGVMLPTEHHGACWEPGPLS*LSARRR
Trigger: ACGCCGTCGGGCGGACAACAAAGAGAGAGGCCCCGG...CTCCCAGCATGCTCCGTGATGTTCAGTGGGCAGCATTACCCCCTCTGCTGCCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000504160.1
CDS-3UTR CAA 90 bp GAGGGGGTAATGCTGCCCACTGAACATCACGGAGCATGCTGGGAGCTGCTGGGCGGGACTCACAACCCTTaGGCCGCCCGGCCACACGTT +
Preference number: 5 (lower is better)
Translates to: EGVMLPTEHHGACWELLGGTHNP*AARPHV
Trigger: AACGTGTGGCCGGGCGGCCAAAGGGTTGTGAGTCCC...GCCCAGCAGCTCCCAGCATGCTCCGTGATGTTCAGTGGGCAGCATTACCCCCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000504160.1
CDS-3UTR CAA 90 bp CTCCCTGGGCACCTCGGAGGCGTCGGCCCGGCAGATGGGACACGTCCGGTTGGCTTGCTGTTGGTGACATaGGCAGCATCGAGAGGAAGT +
Preference number: 5 (lower is better)
Translates to: LPGHLGGVGPADGTRPVGLLLVT*AASRGS
Trigger: ACTTCCTCTCGATGCTGCCAATGTCACCAACAGCAA...GCCAACCGGACGTGTCCCATCTGCCGGGCCGACGCCTCCGAGGTGCCCAGGGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506378.1
ENST00000513029.5
CDS-3UTR CAA 90 bp CTCTGCTGGGTGGCTGGGTGCAGCATTCGGGGGCTCCCGCCGGCAGGAGCCGAGTTGGCCTTCAACCACTaGTCAACACACTTGGTGTGG +
Preference number: 5 (lower is better)
Translates to: LCWVAGCSIRGLPPAGAELAFNH*STHLVW
Trigger: CCACACCAAGTGTGTTGACAAGTGGTTGAAGGCCAA...CTCGGCTCCTGCCGGCGGGAGCCCCCGAATGCTGCACCCAGCCACCCAGCAGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000513029.5
CDS TCA 90 bp GGCCCAGGGTCAAGGTCAGGAGTGGGGCACACAGAGCCGCTCTCCTaGCTCCCTCCTTGCAAACAGAGCCCAGAACGTTGCAGCGGGGAA +
Preference number: 5 (lower is better)
Translates to: GPGSRSGVGHTEPLS*LPPCKQSPERCSGE
Trigger: TTCCCCGCTGCAACGTTCTGGGCTCTGTTTGCAAGGAGGGAGTCAGGAGAGCGGCTCTGTGTGCCCCACTCCTGACCTTGACCCTGGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508478.1
CDS GCA 90 bp ATGGGACACGTCCGGTTGGCCTGTGGGAACATGCACGTCAGGCGTTaGTCTCACCAGCCCCAACCCACCACATCTGTGCAGCCACCTGGG +
Preference number: 5 (lower is better)
Translates to: MGHVRLACGNMHVRR*SHQPQPTTSVQPPG
Trigger: CCCAGGTGGCTGCACAGATGTGGTGGGTTGGGGCTGGTGAGAGCAACGCCTGACGTGCATGTTCCCACAGGCCAACCGGACGTGTCCCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506378.1
CDS-3UTR CAA 90 bp AGGATGTGCCGGCCCCACACGCAGTTCGTTCAGGGCAGCAACCCCAGCTGGGTAAGGCAAGGGGAAGCCTaGGGTCGTCACTGTGGTGAC +
Preference number: 5 (lower is better)
Translates to: RMCRPHTQFVQGSNPSWVRQGEA*GRHCGD
Trigger: GTCACCACAGTGACGACCCAAGGCTTCCCCTTGCCT...TACCCAGCTGGGGTTGCTGCCCTGAACGAACTGCGTGTGGGGCCGGCACATCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000274811.9
CDS-3UTR CAA 90 bp CCCCTGGGCACTCGGTCCCAGTTGGTCCCTATACCCGCCCCTATTAAACCAAAAGTGAGACCCCGGGGCTaGGCATCTCCCAGCCGCTCG +
Preference number: 5 (lower is better)
Translates to: PLGTRSQLVPIPAPIKPKVRPRG*ASPSRS
Trigger: CGAGCGGCTGGGAGATGCCAAGCCCCGGGGTCTCAC...TTTTGGTTTAATAGGGGCGGGTATAGGGACCAACTGGGACCGAGTGCCCAGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 1 transcripts:
ENST00000274811.9
CDS-3UTR CAA 90 bp GCTAGGATGTGCCGGCCCCACACGCAGTTCGTTCAGGGCAGCAACCCCAGCTGGTGCTCTATGTCTGCTTaGGTGAGACCCCGGGGCTTG +
Preference number: 5 (lower is better)
Translates to: ARMCRPHTQFVQGSNPSWCSMSA*VRPRGL
Trigger: CAAGCCCCGGGGTCTCACCAAAGCAGACATAGAGCA...CCAGCTGGGGTTGCTGCCCTGAACGAACTGCGTGTGGGGCCGGCACATCCTAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000274811.9
CDS-3UTR CAA 90 bp GTCGAGCCGCTGGAGGGGCATCCGAGGGTGCTGGGTCTGCAGAGACACAAACTGCTGGTACGGCCCAGATaGCCCAACAGACCAATGGCG +
Preference number: 5 (lower is better)
Translates to: VEPLEGHPRVLGLQRHKLLVRPR*PNRPMA
Trigger: CGCCATTGGTCTGTTGGGCAATCTGGGCCGTACCAG...CAGTTTGTGTCTCTGCAGACCCAGCACCCTCGGATGCCCCTCCAGCGGCTCGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513029.5
CDS-3UTR CAA 90 bp ACCTGCTCGTGGAGATCAACCATGAACGGGCTCTGCTGGGTGGCTGGGTGCAGCAGGCAAGGGGAAGCCTaGGGTCGTCACTGTGGTGAC +
Preference number: 5 (lower is better)
Translates to: TCSWRSTMNGLCWVAGCSRQGEA*GRHCGD
Trigger: GTCACCACAGTGACGACCCAAGGCTTCCCCTTGCCT...GCTGCACCCAGCCACCCAGCAGAGCCCGTTCATGGTTGATCTCCACGAGCAGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504160.1
ENST00000513029.5
CDS-3UTR CAA 90 bp CAGAGGGAGAGGAGATTGGGCACGGGTCTGGCTGCATCCCTGGGAGGGACAACCAAATGCAGGGGCTTATaGCAGGGACTCCTCGCTGGG +
Preference number: 5 (lower is better)
Translates to: QRERRLGTGLAASLGGTTKCRGL*QGLLAG
Trigger: CCCAGCGAGGAGTCCCTGCAATAAGCCCCTGCATTT...GGTTGTCCCTCCCAGGGATGCAGCCAGACCCGTGCCCAATCTCCTCTCCCTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274811.9
CDS CCA 90 bp GGAGATGACGTCACCCCCAAGAGCTGCAGCACCGCGCTGACATCATaGCCCGGCCGCCCCACTTCTCCTTGTTTATACTACACGGCGTCT +
Preference number: 5 (lower is better)
Translates to: GDDVTPKSCSTALTS*PGRPTSPCLYYTAS
Trigger: AGACGCCGTGTAGTATAAACAAGGAGAAGTGGGGCGGCCGGGCCATGATGTCAGCGCGGTGCTGCAGCTCTTGGGGGTGACGTCATCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000513029.5
CDS-3UTR CAA 90 bp ATCTCCCAGCCGCTCGGCCAGGTTCAGGAGGGCCTCATAGTTCTCCATCTCCACAGGCAAGGGGAAGCCTaGGGTCGTCACTGTGGTGAC +
Preference number: 5 (lower is better)
Translates to: ISQPLGQVQEGLIVLHLHRQGEA*GRHCGD
Trigger: GTCACCACAGTGACGACCCAAGGCTTCCCCTTGCCT...GTGGAGATGGAGAACTATGAGGCCCTCCTGAACCTGGCCGAGCGGCTGGGAGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513029.5
CDS-3UTR CAA 90 bp GCTAGGATGTGCCGGCCCCACACGCAGTTCGTTCAGGGCAGCAACCCCAGCTGGGGGAGTCTTTGGAGCTaGGCAAATGCAGGGGCTTAT +
Preference number: 5 (lower is better)
Translates to: ARMCRPHTQFVQGSNPSWGSLWS*ANAGAY
Trigger: ATAAGCCCCTGCATTTGCCAAGCTCCAAAGACTCCC...CCAGCTGGGGTTGCTGCCCTGAACGAACTGCGTGTGGGGCCGGCACATCCTAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000274811.9
CDS TCA 90 bp ATCCACGTCCAGGTCCAGGCTGATGGTGGGCCCCATTGCTGTTGGTaGCATTGGCAGCATCGAGCTAGAGAGAGACAAGTGTGGGGGCCC +
Preference number: 5 (lower is better)
Translates to: IHVQVQADGGPHCCW*HWQHRARERQVWGP
Trigger: GGGCCCCCACACTTGTCTCTCTCTAGCTCGATGCTGCCAATGTCACCAACAGCAATGGGGCCCACCATCAGCCTGGACCTGGACGTGGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000508478.1
CDS TCA 90 bp ACCTTCCCGGAGATGACGTCACCCCCAAGAGCTGCAGCACCGCGCTaGCATCATGGCCCGGCCGCCCCACTTCTCCTTGTTTATACTACA +
Preference number: 5 (lower is better)
Translates to: TFPEMTSPPRAAAPR*HHGPAAPLLLVYTT
Trigger: TGTAGTATAAACAAGGAGAAGTGGGGCGGCCGGGCCATGATGTCAGCGCGGTGCTGCAGCTCTTGGGGGTGACGTCATCTCCGGGAAGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000513029.5
CDS-3UTR CAA 90 bp TTTGGTGAGACCCCGGGGCTTGGCATCTCCCAGCCGCTCGGCCAGGTTCAGGAGTTGCTGTTGGTGACATaGGCAGCATCGAGAGGAAGT +
Preference number: 5 (lower is better)
Translates to: FGETPGLGISQPLGQVQELLLVT*AASRGS
Trigger: ACTTCCTCTCGATGCTGCCAATGTCACCAACAGCAA...CTCCTGAACCTGGCCGAGCGGCTGGGAGATGCCAAGCCCCGGGGTCTCACCAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513029.5
CDS-3UTR CAA 90 bp AGCATGACCGTGCTCGGCCCCCTGGGCACTCGGTCCCAGTTGGTCCCTATACCCTTGGCCTTCAACCACTaGTCAACACACTTGGTGTGG +
Preference number: 5 (lower is better)
Translates to: SMTVLGPLGTRSQLVPIPLAFNH*STHLVW
Trigger: CCACACCAAGTGTGTTGACAAGTGGTTGAAGGCCAA...GGGTATAGGGACCAACTGGGACCGAGTGCCCAGGGGGCCGAGCACGGTCATGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000274811.9
CDS-3UTR CAA 90 bp GAAAAGCGTCGGGTCCCGGTAGGCTCTAGGGACGTGTGCAGTACAGTGCATGGCCTAGGGAGGGAGTCTTaGGAGCTTGGCAAATGCAGG +
Preference number: 5 (lower is better)
Translates to: EKRRVPVGSRDVCSTVHGLGRES*ELGKCR
Trigger: CCTGCATTTGCCAAGCTCCAAAGACTCCCTCCCTAG...GCCATGCACTGTACTGCACACGTCCCTAGAGCCTACCGGGACCCGACGCTTTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274811.9
CDS-3UTR CAA 90 bp AGCATGACCGTGCTCGGCCCCCTGGGCACTCGGTCCCAGTTGGTCCCTATACCCATATACAGTAAGACTTaGGGTTCTCCATGGGGGTGG +
Preference number: 5 (lower is better)
Translates to: SMTVLGPLGTRSQLVPIPIYSKT*GSPWGW
Trigger: CCACCCCCATGGAGAACCCAAAGTCTTACTGTATAT...GGGTATAGGGACCAACTGGGACCGAGTGCCCAGGGGGCCGAGCACGGTCATGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000274811.9
CDS-3UTR CAA 90 bp CCCCTGGGCACTCGGTCCCAGTTGGTCCCTATACCCGCCCCTATTAAACCAAAATGGGCCCCATTGCTGTaGGTGACATTGGCAGCATCG +
Preference number: 5 (lower is better)
Translates to: PLGTRSQLVPIPAPIKPKWAPLL*VTLAAS
Trigger: CGATGCTGCCAATGTCACCAACAGCAATGGGGCCCA...TTTTGGTTTAATAGGGGCGGGTATAGGGACCAACTGGGACCGAGTGCCCAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000274811.9
CDS-3UTR CAA 90 bp CTCGGCCAGGTTCAGGAGGGCCTCATAGTTCTCCATCTCCACATCATCCACGTCTGGGCCCCATTGCTGTaGGTGACATTGGCAGCATCG +
Preference number: 5 (lower is better)
Translates to: LGQVQEGLIVLHLHIIHVWAPLL*VTLAAS
Trigger: CGATGCTGCCAATGTCACCAACAGCAATGGGGCCCA...GACGTGGATGATGTGGAGATGGAGAACTATGAGGCCCTCCTGAACCTGGCCGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513029.5
CDS-3UTR CAA 90 bp CAGGATGTAGTGGTCACTGGAGATGAGGTGGGGGTAGGCCTGATAGGGCACAGGATGGGACACGTCCGGTaGGCCTTCAACCACTTGTCA +
Preference number: 5 (lower is better)
Translates to: QDVVVTGDEVGVGLIGHRMGHVR*AFNHLS
Trigger: TGACAAGTGGTTGAAGGCCAACCGGACGTGTCCCAT...CCTGTGCCCTATCAGGCCTACCCCCACCTCATCTCCAGTGACCACTACATCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000513029.5
CDS TCA 90 bp CCTCATAGTTCTCCATCTCCACATCATCCACGTCCAGGTCCAGGCTaGTGGTGGGCCCCATTGCTGTTGGTGACATTGGCAGCATCGAGC +
Preference number: 5 (lower is better)
Translates to: PHSSPSPHHPRPGPG*WWAPLLLVTLAASS
Trigger: GCTCGATGCTGCCAATGTCACCAACAGCAATGGGGCCCACCATCAGCCTGGACCTGGACGTGGATGATGTGGAGATGGAGAACTATGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508478.1
CDS-3UTR CAA 90 bp GCTAGGATGTGCCGGCCCCACACGCAGTTCGTTCAGGGCAGCAACCCCAGCTGGATCCTACACGTGATTTaGGGCCAAATGAATGAACAA +
Preference number: 5 (lower is better)
Translates to: ARMCRPHTQFVQGSNPSWILHVI*GQMNEQ
Trigger: TTGTTCATTCATTTGGCCCAAAATCACGTGTAGGAT...CCAGCTGGGGTTGCTGCCCTGAACGAACTGCGTGTGGGGCCGGCACATCCTAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274811.9
CDS-3UTR CAA 90 bp CAGAGGGAGAGGAGATTGGGCACGGGTCTGGCTGCATCCCTGGGAGGGACAACCTGCCTAGGCCAGAAGTaGGTAAATAAGAGAGTAAAC +
Preference number: 5 (lower is better)
Translates to: QRERRLGTGLAASLGGTTCLGQK*VNKRVN
Trigger: GTTTACTCTCTTATTTACCAACTTCTGGCCTAGGCA...GGTTGTCCCTCCCAGGGATGCAGCCAGACCCGTGCCCAATCTCCTCTCCCTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274811.9
CDS CCA 90 bp CGCCCCACTTCTCCTTGTTTATACTACACGGCGTCTTTAAAAAGCTaGTACGGCCCAGATTGCCCAACAGACCAATGGCGGACCACCCAT +
Preference number: 5 (lower is better)
Translates to: RPTSPCLYYTASLKS*YGPDCPTDQWRTTH
Trigger: ATGGGTGGTCCGCCATTGGTCTGTTGGGCAATCTGGGCCGTACCAGCTTTTTAAAGACGCCGTGTAGTATAAACAAGGAGAAGTGGGGCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000513029.5
CDS-3UTR CAA 90 bp CAGAAGTTGGTAAATAAGAGAGTAAACAATGGCAAGCCCCCACCACAGGAAATCCAGAGGGAGAGGAGATaGGGCACGGGTCTGGCTGCA +
Preference number: 5 (lower is better)
Translates to: QKLVNKRVNNGKPPPQEIQRERR*GTGLAA
Trigger: TGCAGCCAGACCCGTGCCCAATCTCCTCTCCCTCTG...GATTTCCTGTGGTGGGGGCTTGCCATTGTTTACTCTCTTATTTACCAACTTCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000274811.9
CDS GCA 90 bp TGTTTATACTACACGGCGTCTTTAAAAAGCTGGTACGGCCCAGATTaGCCAACAGACCAATGGCGGACCACCCATGCAAACGAGCTAACG +
Preference number: 5 (lower is better)
Translates to: CLYYTASLKSWYGPD*PTDQWRTTHANELT
Trigger: CGTTAGCTCGTTTGCATGGGTGGTCCGCCATTGGTCTGTTGGGCAATCTGGGCCGTACCAGCTTTTTAAAGACGCCGTGTAGTATAAACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000513029.5
CDS-3UTR CAA 90 bp GCTATAAATATAGAAACGTCACCTGGAGTTATATACAGTAAGACTTTGGGTTCTCCGGGGCCTCTCTCTTaGTTGTCCGCCCGACGGCGT +
Preference number: 5 (lower is better)
Translates to: AINIETSPGVIYSKTLGSPGPLS*LSARRR
Trigger: ACGCCGTCGGGCGGACAACAAAGAGAGAGGCCCCGG...AGAACCCAAAGTCTTACTGTATATAACTCCAGGTGACGTTTCTATATTTATAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274811.9
CDS-3UTR CAA 90 bp CAGAAGTTGGTAAATAAGAGAGTAAACAATGGCAAGCCCCCACCACAGGAAATCGGGTTTGAAAACGTTTaGTTGGGGTCGGGAAGGGAG +
Preference number: 5 (lower is better)
Translates to: QKLVNKRVNNGKPPPQEIGFENV*LGSGRE
Trigger: CTCCCTTCCCGACCCCAACAAAACGTTTTCAAACCC...GATTTCCTGTGGTGGGGGCTTGCCATTGTTTACTCTCTTATTTACCAACTTCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000274811.9
CDS-3UTR CAA 90 bp CAGAAGTTGGTAAATAAGAGAGTAAACAATGGCAAGCCCCCACCACAGGAAATCTTGCTGTTGGTGACATaGGCAGCATCGAGAGGAAGT +
Preference number: 5 (lower is better)
Translates to: QKLVNKRVNNGKPPPQEILLLVT*AASRGS
Trigger: ACTTCCTCTCGATGCTGCCAATGTCACCAACAGCAA...GATTTCCTGTGGTGGGGGCTTGCCATTGTTTACTCTCTTATTTACCAACTTCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000274811.9
CDS-3UTR CAA 90 bp GCTATAAATATAGAAACGTCACCTGGAGTTATATACAGTAAGACTTTGGGTTCTATGGGACACGTCCGGTaGGCCTTCAACCACTTGTCA +
Preference number: 5 (lower is better)
Translates to: AINIETSPGVIYSKTLGSMGHVR*AFNHLS
Trigger: TGACAAGTGGTTGAAGGCCAACCGGACGTGTCCCAT...AGAACCCAAAGTCTTACTGTATATAACTCCAGGTGACGTTTCTATATTTATAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274811.9
CDS GCA 72 bp GGTCGGGACGGCGGCTTCCCCAGAGCTGGCCCGGGGTaGTGCCAGGTCCCGCAGAGAATCGCCGCTGGCCCA +
Preference number: 6 (lower is better)
Translates to: GRDGGFPRAGPG*CQVPQRIAAGP
Trigger: TGGGCCAGCGGCGATTCTCTGCGGGACCTGGCAGCACCCCGGGCCAGCTCTGGGGAAGCCGCCGTCCCGACC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504160.1
CDS GCA 72 bp CGGGACGGCGGCTGCTTCCCCAGAGCTGGCCCGGGGTaGTGCCAGGTCCCGCAGAGAATCGCCGCTGGCCCA +
Preference number: 6 (lower is better)
Translates to: RDGGCFPRAGPG*CQVPQRIAAGP
Trigger: TGGGCCAGCGGCGATTCTCTGCGGGACCTGGCAGCACCCCGGGCCAGCTCTGGGGAAGCAGCCGCCGTCCCG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513029.5
CDS CCA 72 bp GCTGGGAGGGTAAGCGCTCATCCCGGGCAGGCGGGCTaGCCAGGGGGCCCTCGAGGCCAGGGCTTCCCCAGA +
Preference number: 6 (lower is better)
Translates to: AGRVSAHPGQAG*PGGPRGQGFPR
Trigger: TCTGGGGAAGCCCTGGCCTCGAGGGCCCCCTGGCCAGCCCGCCTGCCCGGGATGAGCGCTTACCCTCCCAGC
75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000274811.9
CDS CAA 72 bp CCGGGGGCAGCCCGGCTCCTTCCGGGGCCTCTCTCTTaGTTGTCCGCCCGACGGCGTCTGCCTCGCGAGGCC +
Preference number: 6 (lower is better)
Translates to: PGAARLLPGPLS*LSARRRLPREA
Trigger: GGCCTCGCGAGGCAGACGCCGTCGGGCGGACAACAAAGAGAGAGGCCCCGGAAGGAGCCGGGCTGCCCCCGG
75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000274811.9
ENST00000504160.1
CDS CAA 90 bp CCGGGTCCGGGGGCAGCCCGGCTCCTTCCGGGGCCTCTCTCTTTGTaGTCCGCCCGACGGCGTCTGCCTCGCGAGGCCCACGCGCGATCA +
Preference number: 6 (lower is better)
Translates to: PGPGAARLLPGPLSL*SARRRLPREAHARS
Trigger: TGATCGCGCGTGGGCCTCGCGAGGCAGACGCCGTCGGGCGGACAACAAAGAGAGAGGCCCCGGAAGGAGCCGGGCTGCCCCCGGACCCGG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000274811.9
ENST00000504160.1
CDS CCA 72 bp CCCGGGGTGCTGCCAGGTCCCGCAGAGAATCGCCGCTaGCCCACGGGGGCGGAGGGTGGCCACCTAGTCACT +
Preference number: 6 (lower is better)
Translates to: PGVLPGPAENRR*PTGAEGGHLVT
Trigger: AGTGACTAGGTGGCCACCCTCCGCCCCCGTGGGCCAGCGGCGATTCTCTGCGGGACCTGGCAGCACCCCGGG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000274811.9
ENST00000504160.1
ENST00000504434.1
ENST00000513029.5
CDS CCA 72 bp AGGAGCCGAGGCTCGGCGCTCCTCTACGGGGAGGTGTaGAGGTCGGGACGGCGGCTTCCCCAGAGCTGGCCC +
Preference number: 6 (lower is better)
Translates to: RSRGSALLYGEV*RSGRRLPQSWP
Trigger: GGGCCAGCTCTGGGGAAGCCGCCGTCCCGACCTCCACACCTCCCCGTAGAGGAGCGCCGAGCCTCGGCTCCT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504160.1
CDS CAA 72 bp GGGGCAGCCCGGCTCCTTCCGGGGCCTCTCTCTTTGTaGTCCGCCCGACGGCGTCTGCCTCGCGAGGCCCAC +
Preference number: 6 (lower is better)
Translates to: GAARLLPGPLSL*SARRRLPREAH
Trigger: GTGGGCCTCGCGAGGCAGACGCCGTCGGGCGGACAACAAAGAGAGAGGCCCCGGAAGGAGCCGGGCTGCCCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000274811.9
ENST00000504160.1
CDS CCA 72 bp TCTACGGGGAGGTGTGGAGGTCGGGACGGCGGCTGCTaGGAGGGTAAGCGCTCATCCCGGGCAGGCGGGCTG +
Preference number: 6 (lower is better)
Translates to: STGRCGGRDGGC*EGKRSSRAGGL
Trigger: CAGCCCGCCTGCCCGGGATGAGCGCTTACCCTCCCAGCAGCCGCCGTCCCGACCTCCACACCTCCCCGTAGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274811.9
ENST00000504434.1
CDS GCA 72 bp GGCCACCTTCCCGGAGATGACGTCACCCCCAAGAGCTaGAGCACCGCGCTGACATCATGGCCCGGCCGCCCC +
Preference number: 6 (lower is better)
Translates to: GHLPGDDVTPKS*STALTSWPGRP
Trigger: GGGGCGGCCGGGCCATGATGTCAGCGCGGTGCTGCAGCTCTTGGGGGTGACGTCATCTCCGGGAAGGTGGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000513029.5
CDS CCA 72 bp GCAGGACGCAGCTGGGTCTGCGCGGCAGCCGGCGGCTaGCCCTTTAAGAACTGTCCGCGGCGGCAGCGGAAT +
Preference number: 6 (lower is better)
Translates to: AGRSWVCAAAGG*PFKNCPRRQRN
Trigger: ATTCCGCTGCCGCCGCGGACAGTTCTTAAAGGGCCAGCCGCCGGCTGCCGCGCAGACCCAGCTGCGTCCTGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274811.9
ENST00000504160.1
CDS CAA 90 bp CTGGGCACCTCGGAGGCGTCGGCCCGGCAGATGGGACACGTCCGGTaGGCCTGTGGGAACATGCACGTCAGGCGTTGCTCTCACCAGCCC +
Preference number: 6 (lower is better)
Translates to: LGTSEASARQMGHVR*ACGNMHVRRCSHQP
Trigger: GGGCTGGTGAGAGCAACGCCTGACGTGCATGTTCCCACAGGCCAACCGGACGTGTCCCATCTGCCGGGCCGACGCCTCCGAGGTGCCCAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506378.1
CDS GCA 72 bp CGGGGCCTCTCTCTTTGTTGTCCGCCCGACGGCGTCTaGCTCGCGAGGCCCACGCGCGATCAGTCTCTCTCG +
Preference number: 6 (lower is better)
Translates to: RGLSLCCPPDGV*LARPTRDQSLS
Trigger: CGAGAGAGACTGATCGCGCGTGGGCCTCGCGAGGCAGACGCCGTCGGGCGGACAACAAAGAGAGAGGCCCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000274811.9
ENST00000504160.1
CDS CCA 72 bp CAGGACTGGGAGGCTCCTTCCTACCTTCCCCAGAGCTaGCCCGGGGTGCTGCCAGGTCCCGCAGAGAATCGC +
Preference number: 6 (lower is better)
Translates to: QDWEAPSYLPQS*PGVLPGPAENR
Trigger: GCGATTCTCTGCGGGACCTGGCAGCACCCCGGGCCAGCTCTGGGGAAGGTAGGAAGGAGCCTCCCAGTCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504434.1
CDS CCA 72 bp CGGAGGCGTCGGCCCGGCAGATGGGACACGTCCGGTTaGCCTGTGGGAACATGCACGTCAGGCGTTGCTCTC +
Preference number: 6 (lower is better)
Translates to: RRRRPGRWDTSG*PVGTCTSGVAL
Trigger: GAGAGCAACGCCTGACGTGCATGTTCCCACAGGCCAACCGGACGTGTCCCATCTGCCGGGCCGACGCCTCCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506378.1
CDS CCA 72 bp AGGCTCTGCCCAGCGCAAGCAGAGCTTCCCAACGTGTaGTGCCTGGAGGCCGCTGAGGGCCGGACCACCAGA +
Preference number: 6 (lower is better)
Translates to: RLCPAQAELPNV*CLEAAEGRTTR
Trigger: TCTGGTGGTCCGGCCCTCAGCGGCCTCCAGGCACCACACGTTGGGAAGCTCTGCTTGCGCTGGGCAGAGCCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509404.1
CDS GCA 72 bp CTCTGCCCAGCGCAAGCAGAGCTTCCCAACGTGTGGTaGCTGGAGGCCGCTGAGGGCCGGACCACCAGACTA +
Preference number: 6 (lower is better)
Translates to: LCPAQAELPNVW*LEAAEGRTTRL
Trigger: TAGTCTGGTGGTCCGGCCCTCAGCGGCCTCCAGGCACCACACGTTGGGAAGCTCTGCTTGCGCTGGGCAGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509404.1
CDS CCA 72 bp GTCGGCCCGGCAGATGGGACACGTCCGGTTGGCCTGTaGGAACATGCACGTCAGGCGTTGCTCTCACCAGCC +
Preference number: 6 (lower is better)
Translates to: VGPADGTRPVGL*EHARQALLSPA
Trigger: GGCTGGTGAGAGCAACGCCTGACGTGCATGTTCCCACAGGCCAACCGGACGTGTCCCATCTGCCGGGCCGAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506378.1
CDS CAA 72 bp TCGGAGGCGTCGGCCCGGCAGATGGGACACGTCCGGTaGGCCTGTGGGAACATGCACGTCAGGCGTTGCTCT +
Preference number: 6 (lower is better)
Translates to: SEASARQMGHVR*ACGNMHVRRCS
Trigger: AGAGCAACGCCTGACGTGCATGTTCCCACAGGCCAACCGGACGTGTCCCATCTGCCGGGCCGACGCCTCCGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506378.1
CDS GCA 72 bp CCTACCTGCTCGTGGAGATCAACCATGAACGGGCTCTaGTGGGTGGCTGGGTGCAGCATTCGGGGGCTCCCG +
Preference number: 6 (lower is better)
Translates to: PTCSWRSTMNGL*WVAGCSIRGLP
Trigger: CGGGAGCCCCCGAATGCTGCACCCAGCCACCCAGCAGAGCCCGTTCATGGTTGATCTCCACGAGCAGGTAGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000504434.1
CDS CAA 90 bp TACGACGGGAGCTGCTCTATGTCTGCTTTGGTGAGACCCCGGGGCTaGGCATCTCCCAGCCGCTCGGCCAGGTTCAGGAGGGCCTGCATG +
Preference number: 6 (lower is better)
Translates to: YDGSCSMSALVRPRG*ASPSRSARFRRACM
Trigger: CATGCAGGCCCTCCTGAACCTGGCCGAGCGGCTGGGAGATGCCAAGCCCCGGGGTCTCACCAAAGCAGACATAGAGCAGCTCCCGTCGTA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515051.1
CDS TCA 72 bp GAGGTGGGGCAGGGTACTCACAGCGTCTGCTCCGACTaGTGGCTGTCCGGGTTAAAGCGGTACGACGGGAGC +
Preference number: 6 (lower is better)
Translates to: EVGQGTHSVCSD*WLSGLKRYDGS
Trigger: GCTCCCGTCGTACCGCTTTAACCCGGACAGCCATCAGTCGGAGCAGACGCTGTGAGTACCCTGCCCCACCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508478.1
CDS TCA 72 bp GAGATGACGTCACCCCCAAGAGCTGCAGCACCGCGCTaGCATCATGGCCCGGCCGCCCCACTTCTCCTTGTT +
Preference number: 6 (lower is better)
Translates to: EMTSPPRAAAPR*HHGPAAPLLLV
Trigger: AACAAGGAGAAGTGGGGCGGCCGGGCCATGATGTCAGCGCGGTGCTGCAGCTCTTGGGGGTGACGTCATCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000513029.5
CDS GCA 72 bp GGCAGATGGGACACGTCCGGTTGGCCTGTGGGAACATaGACGTCAGGCGTTGCTCTCACCAGCCCCAACCCA +
Preference number: 6 (lower is better)
Translates to: GRWDTSGWPVGT*TSGVALTSPNP
Trigger: TGGGTTGGGGCTGGTGAGAGCAACGCCTGACGTGCATGTTCCCACAGGCCAACCGGACGTGTCCCATCTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506378.1
CDS CAA 90 bp AAGGTCAGGAGTGGGGCACACAGAGCCGCTCTCCTGACTCCCTCCTaGCAAACAGAGCCCAGAACGTTGCAGCGGGGAAGGGAGCCCAGC +
Preference number: 6 (lower is better)
Translates to: KVRSGAHRAALLTPS*QTEPRTLQRGREPS
Trigger: GCTGGGCTCCCTTCCCCGCTGCAACGTTCTGGGCTCTGTTTGCAAGGAGGGAGTCAGGAGAGCGGCTCTGTGTGCCCCACTCCTGACCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508478.1
CDS CAA 90 bp AGAGCCGCTCTCCTGACTCCCTCCTTGCAAACAGAGCCCAGAACGTaGCAGCGGGGAAGGGAGCCCAGCTGGCGTGCCTGTCAGGTTAAG +
Preference number: 6 (lower is better)
Translates to: RAALLTPSLQTEPRT*QRGREPSWRACQVK
Trigger: CTTAACCTGACAGGCACGCCAGCTGGGCTCCCTTCCCCGCTGCAACGTTCTGGGCTCTGTTTGCAAGGAGGGAGTCAGGAGAGCGGCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508478.1
CDS GCA 72 bp GTCCGGTTGGCCTGTGGGAACATGCACGTCAGGCGTTaGTCTCACCAGCCCCAACCCACCACATCTGTGCAG +
Preference number: 6 (lower is better)
Translates to: VRLACGNMHVRR*SHQPQPTTSVQ
Trigger: CTGCACAGATGTGGTGGGTTGGGGCTGGTGAGAGCAACGCCTGACGTGCATGTTCCCACAGGCCAACCGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506378.1
ENST00000515051.1
CDS CAA 72 bp CGTCCGGTTGGCCTGTGGGAACATGCACGTCAGGCGTaGCTCTCACCAGCCCCAACCCACCACATCTGTGCA +
Preference number: 6 (lower is better)
Translates to: RPVGLWEHARQA*LSPAPTHHICA
Trigger: TGCACAGATGTGGTGGGTTGGGGCTGGTGAGAGCAACGCCTGACGTGCATGTTCCCACAGGCCAACCGGACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506378.1
ENST00000515051.1
CDS TCA 72 bp TCCGCGGCGGCAGCGGAATGTAACAAACCCCACATTTaGTTCACAACATTCGAAGCGGCGGGGTCGCGCGCC +
Preference number: 6 (lower is better)
Translates to: SAAAAECNKPHI*FTTFEAAGSRA
Trigger: GGCGCGCGACCCCGCCGCTTCGAATGTTGTGAATCAAATGTGGGGTTTGTTACATTCCGCTGCCGCCGCGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274811.9
CDS TCA 72 bp CGGGACTCACAACCCTTTGGCCGCCCGGCCACACGTTaGCTCCTTTGTTCCCGATCTAGGACGGCCAAACTG +
Preference number: 6 (lower is better)
Translates to: RDSQPFGRPATR*LLCSRSRTAKL
Trigger: CAGTTTGGCCGTCCTAGATCGGGAACAAAGGAGTCAACGTGTGGCCGGGCGGCCAAAGGGTTGTGAGTCCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274811.9
ENST00000504160.1
CDS TCA 72 bp CCGCCTGAGATACTGAAGTGCAATGGGTCTGACCTCTaGCGGGGCGAGAGCGGCCCAAGTGGTTATGCTGGC +
Preference number: 6 (lower is better)
Translates to: PPEILKCNGSDL*RGESGPSGYAG
Trigger: GCCAGCATAACCACTTGGGCCGCTCTCGCCCCGTCAGAGGTCAGACCCATTGCACTTCAGTATCTCAGGCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504434.1
ENST00000513029.5
CDS CCA 72 bp CCTGGGGCCCCTGGAGCTGTGTTTAGGTCTAACCACTaGAGGTTCCAGGAGAACAGGGCATCAGGGACCTGG +
Preference number: 6 (lower is better)
Translates to: PGAPGAVFRSNH*RFQENRASGTW
Trigger: CCAGGTCCCTGATGCCCTGTTCTCCTGGAACCTCCAGTGGTTAGACCTAAACACAGCTCCAGGGGCCCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508478.1
CDS TCA 72 bp ATGGGGTTCTGCCTACCTGCTCGTGGAGATCAACCATaGACGGGCTCTGCTGGGTGGCTGGGTGCAGCATTC +
Preference number: 6 (lower is better)
Translates to: MGFCLPARGDQP*TGSAGWLGAAF
Trigger: GAATGCTGCACCCAGCCACCCAGCAGAGCCCGTTCATGGTTGATCTCCACGAGCAGGTAGGCAGAACCCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504434.1
CDS CAA 90 bp CTGCAGCACCGCGCTGACATCATGGCCCGGCCGCCCCACTTCTCCTaGTTTATACTACACGGCGTCTTTAAAAAGCTGGTACGGCCCAGA +
Preference number: 6 (lower is better)
Translates to: LQHRADIMARPPHFS*FILHGVFKKLVRPR
Trigger: TCTGGGCCGTACCAGCTTTTTAAAGACGCCGTGTAGTATAAACAAGGAGAAGTGGGGCGGCCGGGCCATGATGTCAGCGCGGTGCTGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000513029.5
CDS TCA 72 bp CAGGTCCAGGCTGATGGTGGGCCCCATTGCTGTTGGTaGCATTGGCAGCATCGAGCTAGAGAGAGACAAGTG +
Preference number: 6 (lower is better)
Translates to: QVQADGGPHCCW*HWQHRARERQV
Trigger: CACTTGTCTCTCTCTAGCTCGATGCTGCCAATGTCACCAACAGCAATGGGGCCCACCATCAGCCTGGACCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508478.1
CDS GCA 72 bp TACACGGCGTCTTTAAAAAGCTGGTACGGCCCAGATTaGCCAACAGACCAATGGCGGACCACCCATGCAAAC +
Preference number: 6 (lower is better)
Translates to: YTASLKSWYGPD*PTDQWRTTHAN
Trigger: GTTTGCATGGGTGGTCCGCCATTGGTCTGTTGGGCAATCTGGGCCGTACCAGCTTTTTAAAGACGCCGTGTA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000513029.5
CDS CCA 72 bp CCCCGTCACTGCATGAGGAATACCCAGGAGCAGACCTaGGCAGTGTTACCTTCAACCACTTGTCAACACACT +
Preference number: 6 (lower is better)
Translates to: PRHCMRNTQEQT*AVLPSTTCQHT
Trigger: AGTGTGTTGACAAGTGGTTGAAGGTAACACTGCCCAGGTCTGCTCCTGGGTATTCCTCATGCAGTGACGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506378.1
ENST00000515051.1
CDS CAA 72 bp CTACACGGCGTCTTTAAAAAGCTGGTACGGCCCAGATaGCCCAACAGACCAATGGCGGACCACCCATGCAAA +
Preference number: 6 (lower is better)
Translates to: LHGVFKKLVRPR*PNRPMADHPCK
Trigger: TTTGCATGGGTGGTCCGCCATTGGTCTGTTGGGCAATCTGGGCCGTACCAGCTTTTTAAAGACGCCGTGTAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000513029.5
CDS CAA 72 bp CGCGCTGACATCATGGCCCGGCCGCCCCACTTCTCCTaGTTTATACTACACGGCGTCTTTAAAAAGCTGGTA +
Preference number: 6 (lower is better)
Translates to: RADIMARPPHFS*FILHGVFKKLV
Trigger: TACCAGCTTTTTAAAGACGCCGTGTAGTATAAACAAGGAGAAGTGGGGCGGCCGGGCCATGATGTCAGCGCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000513029.5
CDS CAA 72 bp GACCACCAGACTAGGAGAGAAGACTCCCTAGTGACCTaGGTCAAGGAAATCCCTTTGCTTCTGAGCGCCTCA +
Preference number: 6 (lower is better)
Translates to: DHQTRREDSLVT*VKEIPLLLSAS
Trigger: TGAGGCGCTCAGAAGCAAAGGGATTTCCTTGACCAAGGTCACTAGGGAGTCTTCTCTCCTAGTCTGGTGGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509404.1
CDS CAA 90 bp ACTAGGAGAGAAGACTCCCTAGTGACCTTGGTCAAGGAAATCCCTTaGCTTCTGAGCGCCTCAGTTGGCACAGCTATAAAATGGGGGTGG +
Preference number: 6 (lower is better)
Translates to: TRREDSLVTLVKEIP*LLSASVGTAIKWGW
Trigger: CCACCCCCATTTTATAGCTGTGCCAACTGAGGCGCTCAGAAGCAAAGGGATTTCCTTGACCAAGGTCACTAGGGAGTCTTCTCTCCTAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000509404.1
CDS CAA 90 bp TTGTTTATACTACACGGCGTCTTTAAAAAGCTGGTACGGCCCAGATaGCCCAACAGACCAATGGCGGACCACCCATGCAAACGAGCTAAC +
Preference number: 6 (lower is better)
Translates to: LFILHGVFKKLVRPR*PNRPMADHPCKRAN
Trigger: GTTAGCTCGTTTGCATGGGTGGTCCGCCATTGGTCTGTTGGGCAATCTGGGCCGTACCAGCTTTTTAAAGACGCCGTGTAGTATAAACAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000513029.5
CDS CCA 72 bp TCTCCTTGTTTATACTACACGGCGTCTTTAAAAAGCTaGTACGGCCCAGATTGCCCAACAGACCAATGGCGG +
Preference number: 6 (lower is better)
Translates to: SPCLYYTASLKS*YGPDCPTDQWR
Trigger: CCGCCATTGGTCTGTTGGGCAATCTGGGCCGTACCAGCTTTTTAAAGACGCCGTGTAGTATAAACAAGGAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000513029.5
CDS CAA 72 bp GAAGACTCCCTAGTGACCTTGGTCAAGGAAATCCCTTaGCTTCTGAGCGCCTCAGTTGGCACAGCTATAAAA +
Preference number: 6 (lower is better)
Translates to: EDSLVTLVKEIP*LLSASVGTAIK
Trigger: TTTTATAGCTGTGCCAACTGAGGCGCTCAGAAGCAAAGGGATTTCCTTGACCAAGGTCACTAGGGAGTCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509404.1