RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RNF43 (Homo sapiens)

Ensembl gene IDs: ENSG00000108375

Ensembl transcript IDs: ENST00000407977.7, ENST00000577625.5, ENST00000577716.5, ENST00000580014.1, ENST00000581868.1, ENST00000582293.1, ENST00000583753.5, ENST00000584437.5

Found 863 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CACGCCACAGGCAGCAGCTGGTTGCCTGGCTGGACATGGATTTGCTaGACTGCAGATGTTTTCTGCAGACAAGGTCTGGAGCTGGAGCAG +
Preference number: 1 (lower is better)
Translates to: HATGSSWLPGWTWIC*TADVFCRQGLELEQ
Trigger: CTGCTCCAGCTCCAGACCTTGTCTGCAGAAAACATCTGCAGTGCAGCAAATCCATGTCCAGCCAGGCAACCAGCTGCTGCCTGTGGCGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
3UTR GCA 90 bp GCCTTCAAGGGATCCAGCCCACACACGCCACAGGCAGCAGCTGGTTaGCTGGCTGGACATGGATTTGCTGCACTGCAGATGTTTTCTGCA +
Preference number: 1 (lower is better)
Translates to: AFKGSSPHTPQAAAG*LAGHGFAALQMFSA
Trigger: TGCAGAAAACATCTGCAGTGCAGCAAATCCATGTCCAGCCAGGCAACCAGCTGCTGCCTGTGGCGTGTGTGGGCTGGATCCCTTGAAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
3UTR CCA 90 bp CAGCCCACACACGCCACAGGCAGCAGCTGGTTGCCTGGCTGGACATaGATTTGCTGCACTGCAGATGTTTTCTGCAGACAAGGTCTGGAG +
Preference number: 1 (lower is better)
Translates to: QPTHATGSSWLPGWT*ICCTADVFCRQGLE
Trigger: CTCCAGACCTTGTCTGCAGAAAACATCTGCAGTGCAGCAAATCCATGTCCAGCCAGGCAACCAGCTGCTGCCTGTGGCGTGTGTGGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
3UTR CCA 90 bp GGGATCCAGCCCACACACGCCACAGGCAGCAGCTGGTTGCCTGGCTaGACATGGATTTGCTGCACTGCAGATGTTTTCTGCAGACAAGGT +
Preference number: 1 (lower is better)
Translates to: GIQPTHATGSSWLPG*TWICCTADVFCRQG
Trigger: ACCTTGTCTGCAGAAAACATCTGCAGTGCAGCAAATCCATGTCCAGCCAGGCAACCAGCTGCTGCCTGTGGCGTGTGTGGGCTGGATCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
3UTR CCA 90 bp CTCAGCCTTCAAGGGATCCAGCCCACACACGCCACAGGCAGCAGCTaGTTGCCTGGCTGGACATGGATTTGCTGCACTGCAGATGTTTTC +
Preference number: 1 (lower is better)
Translates to: LSLQGIQPTHATGSS*LPGWTWICCTADVF
Trigger: GAAAACATCTGCAGTGCAGCAAATCCATGTCCAGCCAGGCAACCAGCTGCTGCCTGTGGCGTGTGTGGGCTGGATCCCTTGAAGGCTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
3UTR CCA 90 bp CACTCTCCTGTGGGTCCCTGGCCTGTATGGCTTATACTGGGGAGCTaGGCCTCTGGGCTGTCCAAACCCAAGGGTCACACTTTGCTTTTC +
Preference number: 1 (lower is better)
Translates to: HSPVGPWPVWLILGS*ASGLSKPKGHTLLF
Trigger: GAAAAGCAAAGTGTGACCCTTGGGTTTGGACAGCCCAGAGGCCCAGCTCCCCAGTATAAGCCATACAGGCCAGGGACCCACAGGAGAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
3UTR TCA 90 bp GGTGAATGTCACCCTGATGAGGCCCATCAGCTCTTGTCCACTCAGTaGGGCCAGACTTGTGCTCTAATCCACTCTCCTGTGGGTCCCTGG +
Preference number: 1 (lower is better)
Translates to: GECHPDEAHQLLSTQ*GQTCALIHSPVGPW
Trigger: CCAGGGACCCACAGGAGAGTGGATTAGAGCACAAGTCTGGCCTCACTGAGTGGACAAGAGCTGATGGGCCTCATCAGGGTGACATTCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
3UTR GCA 90 bp ACACACGCCACAGGCAGCAGCTGGTTGCCTGGCTGGACATGGATTTaGTGCACTGCAGATGTTTTCTGCAGACAAGGTCTGGAGCTGGAG +
Preference number: 1 (lower is better)
Translates to: THATGSSWLPGWTWI*CTADVFCRQGLELE
Trigger: CTCCAGCTCCAGACCTTGTCTGCAGAAAACATCTGCAGTGCAGCAAATCCATGTCCAGCCAGGCAACCAGCTGCTGCCTGTGGCGTGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
3UTR CCA 90 bp GGATTTGCTGCACTGCAGATGTTTTCTGCAGACAAGGTCTGGAGCTaGAGCAGGAAACGGCACCCTCTCACCCTCCACCATCACCAGTCC +
Preference number: 1 (lower is better)
Translates to: GFAALQMFSADKVWS*SRKRHPLTLHHHQS
Trigger: GGACTGGTGATGGTGGAGGGTGAGAGGGTGCCGTTTCCTGCTCCAGCTCCAGACCTTGTCTGCAGAAAACATCTGCAGTGCAGCAAATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
3UTR CCA 90 bp TCAAGGGATCCAGCCCACACACGCCACAGGCAGCAGCTGGTTGCCTaGCTGGACATGGATTTGCTGCACTGCAGATGTTTTCTGCAGACA +
Preference number: 1 (lower is better)
Translates to: SRDPAHTRHRQQLVA*LDMDLLHCRCFLQT
Trigger: TGTCTGCAGAAAACATCTGCAGTGCAGCAAATCCATGTCCAGCCAGGCAACCAGCTGCTGCCTGTGGCGTGTGTGGGCTGGATCCCTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
3UTR GCA 90 bp TGGTTGCCTGGCTGGACATGGATTTGCTGCACTGCAGATGTTTTCTaGAGACAAGGTCTGGAGCTGGAGCAGGAAACGGCACCCTCTCAC +
Preference number: 1 (lower is better)
Translates to: WLPGWTWICCTADVF*RQGLELEQETAPSH
Trigger: GTGAGAGGGTGCCGTTTCCTGCTCCAGCTCCAGACCTTGTCTGCAGAAAACATCTGCAGTGCAGCAAATCCATGTCCAGCCAGGCAACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
3UTR GCA 90 bp GCTGGTGTTCAGAGCTCACCCAAGGAGGGAGGTGATAAGGTGTCATaGGTTCTGCTGAACCCACTGGCTGGTATGAACATGAGGCTTGGG +
Preference number: 1 (lower is better)
Translates to: AGVQSSPKEGGDKVS*VLLNPLAGMNMRLG
Trigger: CCCAAGCCTCATGTTCATACCAGCCAGTGGGTTCAGCAGAACGCATGACACCTTATCACCTCCCTCCTTGGGTGAGCTCTGAACACCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
3UTR CCA 90 bp GGACATGGATTTGCTGCACTGCAGATGTTTTCTGCAGACAAGGTCTaGAGCTGGAGCAGGAAACGGCACCCTCTCACCCTCCACCATCAC +
Preference number: 1 (lower is better)
Translates to: GHGFAALQMFSADKV*SWSRKRHPLTLHHH
Trigger: GTGATGGTGGAGGGTGAGAGGGTGCCGTTTCCTGCTCCAGCTCCAGACCTTGTCTGCAGAAAACATCTGCAGTGCAGCAAATCCATGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
3UTR CCA 90 bp GTCATGCGTTCTGCTGAACCCACTGGCTGGTATGAACATGAGGCTTaGGGTGAGGGAAACCAAGTAGGGGTTGGAGAAGGAGCAGCACCT +
Preference number: 1 (lower is better)
Translates to: VMRSAEPTGWYEHEA*GEGNQVGVGEGAAP
Trigger: AGGTGCTGCTCCTTCTCCAACCCCTACTTGGTTTCCCTCACCCCAAGCCTCATGTTCATACCAGCCAGTGGGTTCAGCAGAACGCATGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
3UTR CCA 90 bp TGTGGGTCCCTGGCCTGTATGGCTTATACTGGGGAGCTGGGCCTCTaGGCTGTCCAAACCCAAGGGTCACACTTTGCTTTTCCTTTGTTG +
Preference number: 1 (lower is better)
Translates to: CGSLACMAYTGELGL*AVQTQGSHFAFPLL
Trigger: CAACAAAGGAAAAGCAAAGTGTGACCCTTGGGTTTGGACAGCCCAGAGGCCCAGCTCCCCAGTATAAGCCATACAGGCCAGGGACCCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
3UTR GCA 90 bp TCCCTCCCCACTATTCTTATTCTCAACCCCCAGAGGAACCAAGGCTaGTGTACCCACCTCAGGGACAGAACTCCACACTATAGTGGGAAA +
Preference number: 1 (lower is better)
Translates to: SLPTILILNPQRNQG*CTHLRDRTPHYSGK
Trigger: TTTCCCACTATAGTGTGGAGTTCTGTCCCTGAGGTGGGTACAGCAGCCTTGGTTCCTCTGGGGGTTGAGAATAAGAATAGTGGGGAGGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
3UTR GCA 90 bp TCCTCTTCCAGTGCTTCTAGGAAGTACGGCAAAAAGAATGGTGTTTaGTGTGGTCCTTTCCTTTCCCAGGAGCAGGACTCTGTGCCAGGT +
Preference number: 1 (lower is better)
Translates to: SSSSASRKYGKKNGV*CGPFLSQEQDSVPG
Trigger: ACCTGGCACAGAGTCCTGCTCCTGGGAAAGGAAAGGACCACAGCAAACACCATTCTTTTTGCCGTACTTCCTAGAAGCACTGGAAGAGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
3UTR CCA 90 bp TCTGCCCAGATAAAGTCCAGCAGAAATTCCTCCTTTCTACCTCTCTaGGACTCTGAGACAGGAAATCTTCAAGGAGGAGTTTTTCCCTCC +
Preference number: 1 (lower is better)
Translates to: SAQIKSSRNSSFLPL*DSETGNLQGGVFPS
Trigger: GGAGGGAAAAACTCCTCCTTGAAGATTTCCTGTCTCAGAGTCCCAGAGAGGTAGAAAGGAGGAATTTCTGCTGGACTTTATCTGGGCAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
3UTR-3UTR CCA 90 bp AGGGGCCAAGAGTGGTCAGGCTGCCCTGGGGTGAATGTCACCCTGATGAGGCCCGTAGCAGCCTTACTGTaGAGGGGCCAAAGCTGGTGT +
Preference number: 2 (lower is better)
Translates to: RGQEWSGCPGVNVTLMRPVAALL*RGQSWC
Trigger: ACACCAGCTTTGGCCCCTCCACAGTAAGGCTGCTAC...GGGCCTCATCAGGGTGACATTCACCCCAGGGCAGCCTGACCACTCTTGGCCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
3UTR-3UTR CCA 90 bp GAGGGGCCAAGAGTGGTCAGGCTGCCCTGGGGTGAATGTCACCCTGATGAGGCCGTAGCAGCCTTACTGTaGAGGGGCCAAAGCTGGTGT +
Preference number: 2 (lower is better)
Translates to: EGPRVVRLPWGECHPDEAVAALL*RGQSWC
Trigger: ACACCAGCTTTGGCCCCTCCACAGTAAGGCTGCTAC...GGCCTCATCAGGGTGACATTCACCCCAGGGCAGCCTGACCACTCTTGGCCCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
3UTR-3UTR CCA 90 bp GAGGGGCCAAGAGTGGTCAGGCTGCCCTGGGGTGAATGTCACCCTGATGAGGCCCTTATACTGGGGAGCTaGGCCTCTGGGCTGTCCAAA +
Preference number: 2 (lower is better)
Translates to: EGPRVVRLPWGECHPDEALILGS*ASGLSK
Trigger: TTTGGACAGCCCAGAGGCCCAGCTCCCCAGTATAAG...GGCCTCATCAGGGTGACATTCACCCCAGGGCAGCCTGACCACTCTTGGCCCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
3UTR-3UTR CCA 90 bp CTTGTCCACTCAGTGAGGCCAGACTTGTGCTCTAATCCACTCTCCTGTGGGTCCGGGGAGCTGGGCCTCTaGGCTGTCCAAACCCAAGGG +
Preference number: 2 (lower is better)
Translates to: LVHSVRPDLCSNPLSCGSGELGL*AVQTQG
Trigger: CCCTTGGGTTTGGACAGCCCAGAGGCCCAGCTCCCC...GGACCCACAGGAGAGTGGATTAGAGCACAAGTCTGGCCTCACTGAGTGGACAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
3UTR-3UTR CCA 90 bp AGGGGCCAAGAGTGGTCAGGCTGCCCTGGGGTGAATGTCACCCTGATGAGGCCCTCTCCTGTGGGTCCCTaGCCTGTATGGCTTATACTG +
Preference number: 2 (lower is better)
Translates to: RGQEWSGCPGVNVTLMRPSPVGP*PVWLIL
Trigger: CAGTATAAGCCATACAGGCCAGGGACCCACAGGAGA...GGGCCTCATCAGGGTGACATTCACCCCAGGGCAGCCTGACCACTCTTGGCCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
3UTR-3UTR GCA 90 bp AGGGGCCAAGAGTGGTCAGGCTGCCCTGGGGTGAATGTCACCCTGATGAGGCCCGTGAGGCCAGACTTGTaGTCTAATCCACTCTCCTGT +
Preference number: 2 (lower is better)
Translates to: RGQEWSGCPGVNVTLMRPVRPDL*SNPLSC
Trigger: ACAGGAGAGTGGATTAGAGCACAAGTCTGGCCTCAC...GGGCCTCATCAGGGTGACATTCACCCCAGGGCAGCCTGACCACTCTTGGCCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
3UTR-3UTR CCA 90 bp ACTCAGCCTTCAAGGGATCCAGCCCACACACGCCACAGGCAGCAGCTGGTTGCCTCTGGAGCACACTCTTaGTTGGAGCTAGGCCTGAAC +
Preference number: 2 (lower is better)
Translates to: TQPSRDPAHTRHRQQLVASGAHS*LELGLN
Trigger: GTTCAGGCCTAGCTCCAACCAAGAGTGTGCTCCAGA...GGCAACCAGCTGCTGCCTGTGGCGTGTGTGGGCTGGATCCCTTGAAGGCTGAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
3UTR CAA 90 bp AGCCTTCAAGGGATCCAGCCCACACACGCCACAGGCAGCAGCTGGTaGCCTGGCTGGACATGGATTTGCTGCACTGCAGATGTTTTCTGC +
Preference number: 2 (lower is better)
Translates to: SLQGIQPTHATGSSW*PGWTWICCTADVFC
Trigger: GCAGAAAACATCTGCAGTGCAGCAAATCCATGTCCAGCCAGGCAACCAGCTGCTGCCTGTGGCGTGTGTGGGCTGGATCCCTTGAAGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
3UTR-3UTR GCA 90 bp GAGGGGCCAAGAGTGGTCAGGCTGCCCTGGGGTGAATGTCACCCTGATGAGGCCGGCTGGACATGGATTTaGTGCACTGCAGATGTTTTC +
Preference number: 2 (lower is better)
Translates to: EGPRVVRLPWGECHPDEAGWTWI*CTADVF
Trigger: GAAAACATCTGCAGTGCAGCAAATCCATGTCCAGCC...GGCCTCATCAGGGTGACATTCACCCCAGGGCAGCCTGACCACTCTTGGCCCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
3UTR-3UTR GCA 90 bp GAGGGGCCAAGAGTGGTCAGGCTGCCCTGGGGTGAATGTCACCCTGATGAGGCCCCAAGGGTCACACTTTaGTTTTCCTTTGTTGTCCCC +
Preference number: 2 (lower is better)
Translates to: EGPRVVRLPWGECHPDEAPRVTL*FSFVVP
Trigger: GGGGACAACAAAGGAAAAGCAAAGTGTGACCCTTGG...GGCCTCATCAGGGTGACATTCACCCCAGGGCAGCCTGACCACTCTTGGCCCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
3UTR-3UTR CCA 90 bp GAGGGGCCAAGAGTGGTCAGGCTGCCCTGGGGTGAATGTCACCCTGATGAGGCCGAATGGTGTTTGCTGTaGTCCTTTCCTTTCCCAGGA +
Preference number: 2 (lower is better)
Translates to: EGPRVVRLPWGECHPDEAEWCLL*SFPFPG
Trigger: TCCTGGGAAAGGAAAGGACCACAGCAAACACCATTC...GGCCTCATCAGGGTGACATTCACCCCAGGGCAGCCTGACCACTCTTGGCCCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
3UTR CAA 90 bp CACACACGCCACAGGCAGCAGCTGGTTGCCTGGCTGGACATGGATTaGCTGCACTGCAGATGTTTTCTGCAGACAAGGTCTGGAGCTGGA +
Preference number: 2 (lower is better)
Translates to: HTRHRQQLVAWLDMD*LHCRCFLQTRSGAG
Trigger: TCCAGCTCCAGACCTTGTCTGCAGAAAACATCTGCAGTGCAGCAAATCCATGTCCAGCCAGGCAACCAGCTGCTGCCTGTGGCGTGTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
3UTR-3UTR GCA 90 bp ACTGAGGGAAAAAGGTTCCCAGGTGGGGTCCTCTGCCCACTTTGCCACCACATTAGGAGCAGGACTCTGTaGCAGGTAGGGCCCAAACAC +
Preference number: 2 (lower is better)
Translates to: TEGKRFPGGVLCPLCHHIRSRTL*QVGPKH
Trigger: GTGTTTGGGCCCTACCTGGCACAGAGTCCTGCTCCT...AATGTGGTGGCAAAGTGGGCAGAGGACCCCACCTGGGAACCTTTTTCCCTCAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
3UTR-3UTR GCA 90 bp CTTGTCCACTCAGTGAGGCCAGACTTGTGCTCTAATCCACTCTCCTGTGGGTCCAGGAGCAGGACTCTGTaGCAGGTAGGGCCCAAACAC +
Preference number: 2 (lower is better)
Translates to: LVHSVRPDLCSNPLSCGSRSRTL*QVGPKH
Trigger: GTGTTTGGGCCCTACCTGGCACAGAGTCCTGCTCCT...GGACCCACAGGAGAGTGGATTAGAGCACAAGTCTGGCCTCACTGAGTGGACAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
3UTR-3UTR GCA 90 bp GGAGCTGGGCCTCTGGGCTGTCCAAACCCAAGGGTCACACTTTGCTTTTCCTTTAGGAGCAGGACTCTGTaGCAGGTAGGGCCCAAACAC +
Preference number: 2 (lower is better)
Translates to: GAGPLGCPNPRVTLCFSFRSRTL*QVGPKH
Trigger: GTGTTTGGGCCCTACCTGGCACAGAGTCCTGCTCCT...AAAGGAAAAGCAAAGTGTGACCCTTGGGTTTGGACAGCCCAGAGGCCCAGCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
3UTR-3UTR CCA 90 bp AGGGGCCAAGAGTGGTCAGGCTGCCCTGGGGTGAATGTCACCCTGATGAGGCCCCACCTTTGTAACACCTaGCTACCCATAGCTAGCTTT +
Preference number: 2 (lower is better)
Translates to: RGQEWSGCPGVNVTLMRPHLCNT*LPIASF
Trigger: AAAGCTAGCTATGGGTAGCCAGGTGTTACAAAGGTG...GGGCCTCATCAGGGTGACATTCACCCCAGGGCAGCCTGACCACTCTTGGCCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
3UTR-3UTR CCA 90 bp ACTGAGGGAAAAAGGTTCCCAGGTGGGGTCCTCTGCCCACTTTGCCACCACATTGTGGTCAGGCTGCCCTaGGGTGAATGTCACCCTGAT +
Preference number: 2 (lower is better)
Translates to: TEGKRFPGGVLCPLCHHIVVRLP*GECHPD
Trigger: ATCAGGGTGACATTCACCCCAGGGCAGCCTGACCAC...AATGTGGTGGCAAAGTGGGCAGAGGACCCCACCTGGGAACCTTTTTCCCTCAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
3UTR-3UTR GCA 90 bp CTTGTCCACTCAGTGAGGCCAGACTTGTGCTCTAATCCACTCTCCTGTGGGTCCCAGGCAGCAGCTGGTTaGCTGGCTGGACATGGATTT +
Preference number: 2 (lower is better)
Translates to: LVHSVRPDLCSNPLSCGSQAAAG*LAGHGF
Trigger: AAATCCATGTCCAGCCAGGCAACCAGCTGCTGCCTG...GGACCCACAGGAGAGTGGATTAGAGCACAAGTCTGGCCTCACTGAGTGGACAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
3UTR-3UTR GCA 90 bp AAAAGGTTCCCAGGTGGGGTCCTCTGCCCACTTTGCCACCACATTCACATTCCACAAGAGTGGTCAGGCTaGCCTGGGGTGAATGTCACC +
Preference number: 2 (lower is better)
Translates to: KRFPGGVLCPLCHHIHIPQEWSG*PGVNVT
Trigger: GGTGACATTCACCCCAGGGCAGCCTGACCACTCTTG...TGGAATGTGAATGTGGTGGCAAAGTGGGCAGAGGACCCCACCTGGGAACCTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
3UTR-3UTR CCA 90 bp GAGGGGCCAAGAGTGGTCAGGCTGCCCTGGGGTGAATGTCACCCTGATGAGGCCGTACGGCAAAAAGAATaGTGTTTGCTGTGGTCCTTT +
Preference number: 2 (lower is better)
Translates to: EGPRVVRLPWGECHPDEAVRQKE*CLLWSF
Trigger: AAAGGACCACAGCAAACACCATTCTTTTTGCCGTAC...GGCCTCATCAGGGTGACATTCACCCCAGGGCAGCCTGACCACTCTTGGCCCCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
3UTR-3UTR CCA 90 bp GAGGGAGGTGATAAGGTGTCATGCGTTCTGCTGAACCCACTGGCTGGTATGAACGACAAGGTCTGGAGCTaGAGCAGGAAACGGCACCCT +
Preference number: 2 (lower is better)
Translates to: EGGDKVSCVLLNPLAGMNDKVWS*SRKRHP
Trigger: AGGGTGCCGTTTCCTGCTCCAGCTCCAGACCTTGTC...GTTCATACCAGCCAGTGGGTTCAGCAGAACGCATGACACCTTATCACCTCCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
3UTR-3UTR CCA 90 bp GGAGCTGGGCCTCTGGGCTGTCCAAACCCAAGGGTCACACTTTGCTTTTCCTTTTGGAGGGGCCAAAGCTaGTGTTCAGAGCTCACCCAA +
Preference number: 2 (lower is better)
Translates to: GAGPLGCPNPRVTLCFSFWRGQS*CSELTQ
Trigger: TTGGGTGAGCTCTGAACACCAGCTTTGGCCCCTCCA...AAAGGAAAAGCAAAGTGTGACCCTTGGGTTTGGACAGCCCAGAGGCCCAGCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
3UTR-3UTR CCA 90 bp GGAGCTGGGCCTCTGGGCTGTCCAAACCCAAGGGTCACACTTTGCTTTTCCTTTGTAGCAGCCTTACTGTaGAGGGGCCAAAGCTGGTGT +
Preference number: 2 (lower is better)
Translates to: GAGPLGCPNPRVTLCFSFVAALL*RGQSWC
Trigger: ACACCAGCTTTGGCCCCTCCACAGTAAGGCTGCTAC...AAAGGAAAAGCAAAGTGTGACCCTTGGGTTTGGACAGCCCAGAGGCCCAGCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
3UTR-3UTR GCA 90 bp TGCCCTCAAAAACTCAGCCTTCAAGGGATCCAGCCCACACACGCCACAGGCAGCACTGCAGATGTTTTCTaGAGACAAGGTCTGGAGCTG +
Preference number: 2 (lower is better)
Translates to: CPQKLSLQGIQPTHATGSTADVF*RQGLEL
Trigger: CAGCTCCAGACCTTGTCTGCAGAAAACATCTGCAGT...GCTGCCTGTGGCGTGTGTGGGCTGGATCCCTTGAAGGCTGAGTTTTTGAGGGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
3UTR-3UTR GCA 90 bp TGCCCTCAAAAACTCAGCCTTCAAGGGATCCAGCCCACACACGCCACAGGCAGCGGCTGGACATGGATTTaGTGCACTGCAGATGTTTTC +
Preference number: 2 (lower is better)
Translates to: CPQKLSLQGIQPTHATGSGWTWI*CTADVF
Trigger: GAAAACATCTGCAGTGCAGCAAATCCATGTCCAGCC...GCTGCCTGTGGCGTGTGTGGGCTGGATCCCTTGAAGGCTGAGTTTTTGAGGGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
3UTR-3UTR GCA 90 bp AAGGTGTCATGCGTTCTGCTGAACCCACTGGCTGGTATGAACATGAGGCTTGGGCAGGCAGCAGCTGGTTaGCTGGCTGGACATGGATTT +
Preference number: 2 (lower is better)
Translates to: KVSCVLLNPLAGMNMRLGQAAAG*LAGHGF
Trigger: AAATCCATGTCCAGCCAGGCAACCAGCTGCTGCCTG...CCCAAGCCTCATGTTCATACCAGCCAGTGGGTTCAGCAGAACGCATGACACCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
3UTR-3UTR CCA 90 bp CTTGTCCACTCAGTGAGGCCAGACTTGTGCTCTAATCCACTCTCCTGTGGGTCCTCTGGAGCACACTCTTaGTTGGAGCTAGGCCTGAAC +
Preference number: 2 (lower is better)
Translates to: LVHSVRPDLCSNPLSCGSSGAHS*LELGLN
Trigger: GTTCAGGCCTAGCTCCAACCAAGAGTGTGCTCCAGA...GGACCCACAGGAGAGTGGATTAGAGCACAAGTCTGGCCTCACTGAGTGGACAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
3UTR-3UTR CCA 90 bp AAGGTGTCATGCGTTCTGCTGAACCCACTGGCTGGTATGAACATGAGGCTTGGGCAGCAGCTGGTTGCCTaGCTGGACATGGATTTGCTG +
Preference number: 2 (lower is better)
Translates to: KVSCVLLNPLAGMNMRLGQQLVA*LDMDLL
Trigger: CAGCAAATCCATGTCCAGCCAGGCAACCAGCTGCTG...CCCAAGCCTCATGTTCATACCAGCCAGTGGGTTCAGCAGAACGCATGACACCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
3UTR-3UTR CCA 90 bp ACTGAGGGAAAAAGGTTCCCAGGTGGGGTCCTCTGCCCACTTTGCCACCACATTTTGCCTGGCTGGACATaGATTTGCTGCACTGCAGAT +
Preference number: 2 (lower is better)
Translates to: TEGKRFPGGVLCPLCHHILPGWT*ICCTAD
Trigger: ATCTGCAGTGCAGCAAATCCATGTCCAGCCAGGCAA...AATGTGGTGGCAAAGTGGGCAGAGGACCCCACCTGGGAACCTTTTTCCCTCAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
3UTR-3UTR CCA 90 bp CTTGTCCACTCAGTGAGGCCAGACTTGTGCTCTAATCCACTCTCCTGTGGGTCCTTGCCTGGCTGGACATaGATTTGCTGCACTGCAGAT +
Preference number: 2 (lower is better)
Translates to: LVHSVRPDLCSNPLSCGSLPGWT*ICCTAD
Trigger: ATCTGCAGTGCAGCAAATCCATGTCCAGCCAGGCAA...GGACCCACAGGAGAGTGGATTAGAGCACAAGTCTGGCCTCACTGAGTGGACAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
3UTR-3UTR CCA 90 bp ACCAAGGCTGCTGTACCCACCTCAGGGACAGAACTCCACACTATAGTGGGAAAGGCTGAACCCACTGGCTaGTATGAACATGAGGCTTGG +
Preference number: 2 (lower is better)
Translates to: TKAAVPTSGTELHTIVGKAEPTG*YEHEAW
Trigger: CCAAGCCTCATGTTCATACCAGCCAGTGGGTTCAGC...CTTTCCCACTATAGTGTGGAGTTCTGTCCCTGAGGTGGGTACAGCAGCCTTGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
3UTR-3UTR GCA 90 bp GGAGCTGGGCCTCTGGGCTGTCCAAACCCAAGGGTCACACTTTGCTTTTCCTTTACTGCAGATGTTTTCTaGAGACAAGGTCTGGAGCTG +
Preference number: 2 (lower is better)
Translates to: GAGPLGCPNPRVTLCFSFTADVF*RQGLEL
Trigger: CAGCTCCAGACCTTGTCTGCAGAAAACATCTGCAGT...AAAGGAAAAGCAAAGTGTGACCCTTGGGTTTGGACAGCCCAGAGGCCCAGCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
3UTR-3UTR GCA 90 bp AAAAGGTTCCCAGGTGGGGTCCTCTGCCCACTTTGCCACCACATTCACATTCCAGGTGATAAGGTGTCATaGGTTCTGCTGAACCCACTG +
Preference number: 2 (lower is better)
Translates to: KRFPGGVLCPLCHHIHIPGDKVS*VLLNPL
Trigger: CAGTGGGTTCAGCAGAACGCATGACACCTTATCACC...TGGAATGTGAATGTGGTGGCAAAGTGGGCAGAGGACCCCACCTGGGAACCTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
3UTR-3UTR CCA 90 bp CAGATGTTTTCTGCAGACAAGGTCTGGAGCTGGAGCAGGAAACGGCACCCTCTCGAATGGTGTTTGCTGTaGTCCTTTCCTTTCCCAGGA +
Preference number: 2 (lower is better)
Translates to: QMFSADKVWSWSRKRHPLEWCLL*SFPFPG
Trigger: TCCTGGGAAAGGAAAGGACCACAGCAAACACCATTC...GAGAGGGTGCCGTTTCCTGCTCCAGCTCCAGACCTTGTCTGCAGAAAACATCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
3UTR-3UTR CCA 90 bp TGCCCTCAAAAACTCAGCCTTCAAGGGATCCAGCCCACACACGCCACAGGCAGCGTACGGCAAAAAGAATaGTGTTTGCTGTGGTCCTTT +
Preference number: 2 (lower is better)
Translates to: CPQKLSLQGIQPTHATGSVRQKE*CLLWSF
Trigger: AAAGGACCACAGCAAACACCATTCTTTTTGCCGTAC...GCTGCCTGTGGCGTGTGTGGGCTGGATCCCTTGAAGGCTGAGTTTTTGAGGGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
3UTR-3UTR CCA 90 bp GAGCAGCACCTTTGTAACACCTGGCTACCCATAGCTAGCTTTCTGCCCTCAAAACAGCAGCTGGTTGCCTaGCTGGACATGGATTTGCTG +
Preference number: 2 (lower is better)
Translates to: EQHLCNTWLPIASFLPSKQQLVA*LDMDLL
Trigger: CAGCAAATCCATGTCCAGCCAGGCAACCAGCTGCTG...TTTTGAGGGCAGAAAGCTAGCTATGGGTAGCCAGGTGTTACAAAGGTGCTGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
3UTR-3UTR GCA 90 bp AAACTTTTCCCAGAGAAGAACTCTTTGTTGTCCCCGCTCAGCTGTAATTCTGCCAGGAGCAGGACTCTGTaGCAGGTAGGGCCCAAACAC +
Preference number: 2 (lower is better)
Translates to: KLFPEKNSLLSPLSCNSARSRTL*QVGPKH
Trigger: GTGTTTGGGCCCTACCTGGCACAGAGTCCTGCTCCT...GGCAGAATTACAGCTGAGCGGGGACAACAAAGAGTTCTTCTCTGGGAAAAGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
3UTR-3UTR GCA 90 bp ACCAAGGCTGCTGTACCCACCTCAGGGACAGAACTCCACACTATAGTGGGAAAGACTGCAGATGTTTTCTaGAGACAAGGTCTGGAGCTG +
Preference number: 2 (lower is better)
Translates to: TKAAVPTSGTELHTIVGKTADVF*RQGLEL
Trigger: CAGCTCCAGACCTTGTCTGCAGAAAACATCTGCAGT...CTTTCCCACTATAGTGTGGAGTTCTGTCCCTGAGGTGGGTACAGCAGCCTTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
3UTR-3UTR GCA 90 bp AAAAGGTTCCCAGGTGGGGTCCTCTGCCCACTTTGCCACCACATTCACATTCCACCAAGGGTCACACTTTaGTTTTCCTTTGTTGTCCCC +
Preference number: 2 (lower is better)
Translates to: KRFPGGVLCPLCHHIHIPPRVTL*FSFVVP
Trigger: GGGGACAACAAAGGAAAAGCAAAGTGTGACCCTTGG...TGGAATGTGAATGTGGTGGCAAAGTGGGCAGAGGACCCCACCTGGGAACCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
3UTR-3UTR CCA 90 bp CTTTGTTGTCCCCGCTCAGCTGTAATTCTGCCTTTTCTACCTTCATTCCATCCTGACAAGGTCTGGAGCTaGAGCAGGAAACGGCACCCT +
Preference number: 2 (lower is better)
Translates to: LCCPRSAVILPFLPSFHPDKVWS*SRKRHP
Trigger: AGGGTGCCGTTTCCTGCTCCAGCTCCAGACCTTGTC...AGGATGGAATGAAGGTAGAAAAGGCAGAATTACAGCTGAGCGGGGACAACAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
3UTR-3UTR CCA 90 bp TCCTTCCTCTGCCCAGATAAAGTCCAGCAGAAATTCCTCCTTTCTACCTCTCTGCAGCAGCTGGTTGCCTaGCTGGACATGGATTTGCTG +
Preference number: 2 (lower is better)
Translates to: SFLCPDKVQQKFLLSTSLQQLVA*LDMDLL
Trigger: CAGCAAATCCATGTCCAGCCAGGCAACCAGCTGCTG...CAGAGAGGTAGAAAGGAGGAATTTCTGCTGGACTTTATCTGGGCAGAGGAAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
3UTR-3UTR CCA 90 bp ACTGAGGGAAAAAGGTTCCCAGGTGGGGTCCTCTGCCCACTTTGCCACCACATTCACCTTTGTAACACCTaGCTACCCATAGCTAGCTTT +
Preference number: 2 (lower is better)
Translates to: TEGKRFPGGVLCPLCHHIHLCNT*LPIASF
Trigger: AAAGCTAGCTATGGGTAGCCAGGTGTTACAAAGGTG...AATGTGGTGGCAAAGTGGGCAGAGGACCCCACCTGGGAACCTTTTTCCCTCAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
3UTR-3UTR CCA 90 bp CTTGTCCACTCAGTGAGGCCAGACTTGTGCTCTAATCCACTCTCCTGTGGGTCCCACCTTTGTAACACCTaGCTACCCATAGCTAGCTTT +
Preference number: 2 (lower is better)
Translates to: LVHSVRPDLCSNPLSCGSHLCNT*LPIASF
Trigger: AAAGCTAGCTATGGGTAGCCAGGTGTTACAAAGGTG...GGACCCACAGGAGAGTGGATTAGAGCACAAGTCTGGCCTCACTGAGTGGACAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
3UTR-3UTR CCA 90 bp ACTGAGGGAAAAAGGTTCCCAGGTGGGGTCCTCTGCCCACTTTGCCACCACATTTATGAACATGAGGCTTaGGGTGAGGGAAACCAAGTA +
Preference number: 2 (lower is better)
Translates to: TEGKRFPGGVLCPLCHHIYEHEA*GEGNQV
Trigger: TACTTGGTTTCCCTCACCCCAAGCCTCATGTTCATA...AATGTGGTGGCAAAGTGGGCAGAGGACCCCACCTGGGAACCTTTTTCCCTCAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
3UTR-3UTR GCA 90 bp AAAGCTGGTGTTCAGAGCTCACCCAAGGAGGGAGGTGATAAGGTGTCATGCGTTGGCTGGACATGGATTTaGTGCACTGCAGATGTTTTC +
Preference number: 2 (lower is better)
Translates to: KAGVQSSPKEGGDKVSCVGWTWI*CTADVF
Trigger: GAAAACATCTGCAGTGCAGCAAATCCATGTCCAGCC...AACGCATGACACCTTATCACCTCCCTCCTTGGGTGAGCTCTGAACACCAGCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
3UTR-3UTR CCA 90 bp CTTGTCCACTCAGTGAGGCCAGACTTGTGCTCTAATCCACTCTCCTGTGGGTCCGTACGGCAAAAAGAATaGTGTTTGCTGTGGTCCTTT +
Preference number: 2 (lower is better)
Translates to: LVHSVRPDLCSNPLSCGSVRQKE*CLLWSF
Trigger: AAAGGACCACAGCAAACACCATTCTTTTTGCCGTAC...GGACCCACAGGAGAGTGGATTAGAGCACAAGTCTGGCCTCACTGAGTGGACAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
3UTR-3UTR CCA 90 bp AAAAGGTTCCCAGGTGGGGTCCTCTGCCCACTTTGCCACCACATTCACATTCCATATGAACATGAGGCTTaGGGTGAGGGAAACCAAGTA +
Preference number: 2 (lower is better)
Translates to: KRFPGGVLCPLCHHIHIPYEHEA*GEGNQV
Trigger: TACTTGGTTTCCCTCACCCCAAGCCTCATGTTCATA...TGGAATGTGAATGTGGTGGCAAAGTGGGCAGAGGACCCCACCTGGGAACCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
3UTR-3UTR CCA 90 bp AAACTTTTCCCAGAGAAGAACTCTTTGTTGTCCCCGCTCAGCTGTAATTCTGCCGTAGCAGCCTTACTGTaGAGGGGCCAAAGCTGGTGT +
Preference number: 2 (lower is better)
Translates to: KLFPEKNSLLSPLSCNSAVAALL*RGQSWC
Trigger: ACACCAGCTTTGGCCCCTCCACAGTAAGGCTGCTAC...GGCAGAATTACAGCTGAGCGGGGACAACAAAGAGTTCTTCTCTGGGAAAAGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
3UTR-3UTR CCA 90 bp ACCAAGGCTGCTGTACCCACCTCAGGGACAGAACTCCACACTATAGTGGGAAAGGTACGGCAAAAAGAATaGTGTTTGCTGTGGTCCTTT +
Preference number: 2 (lower is better)
Translates to: TKAAVPTSGTELHTIVGKVRQKE*CLLWSF
Trigger: AAAGGACCACAGCAAACACCATTCTTTTTGCCGTAC...CTTTCCCACTATAGTGTGGAGTTCTGTCCCTGAGGTGGGTACAGCAGCCTTGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
3UTR-3UTR CCA 90 bp AGAACTCTTTGTTGTCCCCGCTCAGCTGTAATTCTGCCTTTTCTACCTTCATTCTGGAGGGGCCAAAGCTaGTGTTCAGAGCTCACCCAA +
Preference number: 2 (lower is better)
Translates to: RTLCCPRSAVILPFLPSFWRGQS*CSELTQ
Trigger: TTGGGTGAGCTCTGAACACCAGCTTTGGCCCCTCCA...GAATGAAGGTAGAAAAGGCAGAATTACAGCTGAGCGGGGACAACAAAGAGTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
3UTR-3UTR GCA 90 bp AAACTTTTCCCAGAGAAGAACTCTTTGTTGTCCCCGCTCAGCTGTAATTCTGCCGGTGATAAGGTGTCATaGGTTCTGCTGAACCCACTG +
Preference number: 2 (lower is better)
Translates to: KLFPEKNSLLSPLSCNSAGDKVS*VLLNPL
Trigger: CAGTGGGTTCAGCAGAACGCATGACACCTTATCACC...GGCAGAATTACAGCTGAGCGGGGACAACAAAGAGTTCTTCTCTGGGAAAAGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
3UTR-3UTR GCA 90 bp AAACTTTTCCCAGAGAAGAACTCTTTGTTGTCCCCGCTCAGCTGTAATTCTGCCCTCAGGGCTCACCTATaGTACTGGTCCTTTTGGCAA +
Preference number: 2 (lower is better)
Translates to: KLFPEKNSLLSPLSCNSALRAHL*YWSFWQ
Trigger: TTGCCAAAAGGACCAGTAGCATAGGTGAGCCCTGAG...GGCAGAATTACAGCTGAGCGGGGACAACAAAGAGTTCTTCTCTGGGAAAAGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
3UTR-3UTR GCA 90 bp CTTTGTTGTCCCCGCTCAGCTGTAATTCTGCCTTTTCTACCTTCATTCCATCCTCTCAGGGCTCACCTATaGTACTGGTCCTTTTGGCAA +
Preference number: 2 (lower is better)
Translates to: LCCPRSAVILPFLPSFHPLRAHL*YWSFWQ
Trigger: TTGCCAAAAGGACCAGTAGCATAGGTGAGCCCTGAG...AGGATGGAATGAAGGTAGAAAAGGCAGAATTACAGCTGAGCGGGGACAACAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
3UTR-3UTR CCA 90 bp AGAACTCTTTGTTGTCCCCGCTCAGCTGTAATTCTGCCTTTTCTACCTTCATTCTCTGGAGCACACTCTTaGTTGGAGCTAGGCCTGAAC +
Preference number: 2 (lower is better)
Translates to: RTLCCPRSAVILPFLPSFSGAHS*LELGLN
Trigger: GTTCAGGCCTAGCTCCAACCAAGAGTGTGCTCCAGA...GAATGAAGGTAGAAAAGGCAGAATTACAGCTGAGCGGGGACAACAAAGAGTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
3UTR-3UTR GCA 90 bp AGAACTCTTTGTTGTCCCCGCTCAGCTGTAATTCTGCCTTTTCTACCTTCATTCCTCAGGGCTCACCTATaGTACTGGTCCTTTTGGCAA +
Preference number: 2 (lower is better)
Translates to: RTLCCPRSAVILPFLPSFLRAHL*YWSFWQ
Trigger: TTGCCAAAAGGACCAGTAGCATAGGTGAGCCCTGAG...GAATGAAGGTAGAAAAGGCAGAATTACAGCTGAGCGGGGACAACAAAGAGTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
3UTR-3UTR CCA 90 bp CTTTGTTGTCCCCGCTCAGCTGTAATTCTGCCTTTTCTACCTTCATTCCATCCTAAACCAAGTAGGGGTTaGAGAAGGAGCAGCACCTTT +
Preference number: 2 (lower is better)
Translates to: LCCPRSAVILPFLPSFHPKPSRG*RRSSTF
Trigger: AAAGGTGCTGCTCCTTCTCCAACCCCTACTTGGTTT...AGGATGGAATGAAGGTAGAAAAGGCAGAATTACAGCTGAGCGGGGACAACAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
3UTR-3UTR GCA 90 bp TGGCTGGACATGGATTTGCTGCACTGCAGATGTTTTCTGCAGACAAGGTCTGGAAAAAAGAATGGTGTTTaGTGTGGTCCTTTCCTTTCC +
Preference number: 2 (lower is better)
Translates to: WLDMDLLHCRCFLQTRSGKKNGV*CGPFLS
Trigger: GGAAAGGAAAGGACCACAGCAAACACCATTCTTTTT...TCCAGACCTTGTCTGCAGAAAACATCTGCAGTGCAGCAAATCCATGTCCAGCCA
46% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
3UTR-3UTR CCA 90 bp AAACTTTTCCCAGAGAAGAACTCTTTGTTGTCCCCGCTCAGCTGTAATTCTGCCTCCTTTCTACCTCTCTaGGACTCTGAGACAGGAAAT +
Preference number: 2 (lower is better)
Translates to: KLFPEKNSLLSPLSCNSASFLPL*DSETGN
Trigger: ATTTCCTGTCTCAGAGTCCCAGAGAGGTAGAAAGGA...GGCAGAATTACAGCTGAGCGGGGACAACAAAGAGTTCTTCTCTGGGAAAAGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
3UTR-3UTR CCA 90 bp AGAACTCTTTGTTGTCCCCGCTCAGCTGTAATTCTGCCTTTTCTACCTTCATTCTCCTTTCTACCTCTCTaGGACTCTGAGACAGGAAAT +
Preference number: 2 (lower is better)
Translates to: RTLCCPRSAVILPFLPSFSFLPL*DSETGN
Trigger: ATTTCCTGTCTCAGAGTCCCAGAGAGGTAGAAAGGA...GAATGAAGGTAGAAAAGGCAGAATTACAGCTGAGCGGGGACAACAAAGAGTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
3UTR-3UTR CCA 90 bp AAGAACTCTTTGTTGTCCCCGCTCAGCTGTAATTCTGCCTTTTCTACCTTCATTTATGAACATGAGGCTTaGGGTGAGGGAAACCAAGTA +
Preference number: 2 (lower is better)
Translates to: KNSLLSPLSCNSAFSTFIYEHEA*GEGNQV
Trigger: TACTTGGTTTCCCTCACCCCAAGCCTCATGTTCATA...AATGAAGGTAGAAAAGGCAGAATTACAGCTGAGCGGGGACAACAAAGAGTTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
3UTR CCA 72 bp GCTCTAATCCACTCTCCTGTGGGTCCCTGGCCTGTATaGCTTATACTGGGGAGCTGGGCCTCTGGGCTGTCC +
Preference number: 3 (lower is better)
Translates to: ALIHSPVGPWPV*LILGSWASGLS
Trigger: GGACAGCCCAGAGGCCCAGCTCCCCAGTATAAGCCATACAGGCCAGGGACCCACAGGAGAGTGGATTAGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
3UTR-3UTR CAA 90 bp GAGGGGCCAAGAGTGGTCAGGCTGCCCTGGGGTGAATGTCACCCTGATGAGGCCCCAGAGAAGAACTCTTaGTTGTCCCCGCTCAGCTGT +
Preference number: 3 (lower is better)
Translates to: EGPRVVRLPWGECHPDEAPEKNS*LSPLSC
Trigger: ACAGCTGAGCGGGGACAACAAAGAGTTCTTCTCTGG...GGCCTCATCAGGGTGACATTCACCCCAGGGCAGCCTGACCACTCTTGGCCCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
3UTR-3UTR CAA 90 bp AGGGGCCAAGAGTGGTCAGGCTGCCCTGGGGTGAATGTCACCCTGATGAGGCCCTCAGTGAGGCCAGACTaGTGCTCTAATCCACTCTCC +
Preference number: 3 (lower is better)
Translates to: RGQEWSGCPGVNVTLMRPSVRPD*CSNPLS
Trigger: GGAGAGTGGATTAGAGCACAAGTCTGGCCTCACTGA...GGGCCTCATCAGGGTGACATTCACCCCAGGGCAGCCTGACCACTCTTGGCCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
3UTR-3UTR CAA 90 bp AGGGGCCAAGAGTGGTCAGGCTGCCCTGGGGTGAATGTCACCCTGATGAGGCCCCCCAAGGGTCACACTTaGCTTTTCCTTTGTTGTCCC +
Preference number: 3 (lower is better)
Translates to: RGQEWSGCPGVNVTLMRPPKGHT*LFLCCP
Trigger: GGGACAACAAAGGAAAAGCAAAGTGTGACCCTTGGG...GGGCCTCATCAGGGTGACATTCACCCCAGGGCAGCCTGACCACTCTTGGCCCCT
59% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
3UTR-3UTR CAA 90 bp AGGGGCCAAGAGTGGTCAGGCTGCCCTGGGGTGAATGTCACCCTGATGAGGCCCGAGAAGAACTCTTTGTaGTCCCCGCTCAGCTGTAAT +
Preference number: 3 (lower is better)
Translates to: RGQEWSGCPGVNVTLMRPEKNSL*SPLSCN
Trigger: ATTACAGCTGAGCGGGGACAACAAAGAGTTCTTCTC...GGGCCTCATCAGGGTGACATTCACCCCAGGGCAGCCTGACCACTCTTGGCCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
3UTR CCA 72 bp CCAGCCCACACACGCCACAGGCAGCAGCTGGTTGCCTaGCTGGACATGGATTTGCTGCACTGCAGATGTTTT +
Preference number: 3 (lower is better)
Translates to: PAHTRHRQQLVA*LDMDLLHCRCF
Trigger: AAAACATCTGCAGTGCAGCAAATCCATGTCCAGCCAGGCAACCAGCTGCTGCCTGTGGCGTGTGTGGGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
3UTR GCA 72 bp CCATCAGCTCTTGTCCACTCAGTGAGGCCAGACTTGTaGTCTAATCCACTCTCCTGTGGGTCCCTGGCCTGT +
Preference number: 3 (lower is better)
Translates to: PSALVHSVRPDL*SNPLSCGSLAC
Trigger: ACAGGCCAGGGACCCACAGGAGAGTGGATTAGAGCACAAGTCTGGCCTCACTGAGTGGACAAGAGCTGATGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
3UTR CCA 72 bp GCACTGCAGATGTTTTCTGCAGACAAGGTCTGGAGCTaGAGCAGGAAACGGCACCCTCTCACCCTCCACCAT +
Preference number: 3 (lower is better)
Translates to: ALQMFSADKVWS*SRKRHPLTLHH
Trigger: ATGGTGGAGGGTGAGAGGGTGCCGTTTCCTGCTCCAGCTCCAGACCTTGTCTGCAGAAAACATCTGCAGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
3UTR CCA 72 bp CAGACTTGTGCTCTAATCCACTCTCCTGTGGGTCCCTaGCCTGTATGGCTTATACTGGGGAGCTGGGCCTCT +
Preference number: 3 (lower is better)
Translates to: QTCALIHSPVGP*PVWLILGSWAS
Trigger: AGAGGCCCAGCTCCCCAGTATAAGCCATACAGGCCAGGGACCCACAGGAGAGTGGATTAGAGCACAAGTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
3UTR-3UTR CAA 90 bp CACTGCAGATGTTTTCTGCAGACAAGGTCTGGAGCTGGAGCAGGAAACGGCACCGGAGCACACTCTTGGTaGGAGCTAGGCCTGAACATC +
Preference number: 3 (lower is better)
Translates to: HCRCFLQTRSGAGAGNGTGAHSW*ELGLNI
Trigger: GATGTTCAGGCCTAGCTCCAACCAAGAGTGTGCTCC...GGTGCCGTTTCCTGCTCCAGCTCCAGACCTTGTCTGCAGAAAACATCTGCAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
3UTR-3UTR CAA 90 bp GAGGGAGGTGATAAGGTGTCATGCGTTCTGCTGAACCCACTGGCTGGTATGAACACAGGCAGCAGCTGGTaGCCTGGCTGGACATGGATT +
Preference number: 3 (lower is better)
Translates to: EGGDKVSCVLLNPLAGMNTGSSW*PGWTWI
Trigger: AATCCATGTCCAGCCAGGCAACCAGCTGCTGCCTGT...GTTCATACCAGCCAGTGGGTTCAGCAGAACGCATGACACCTTATCACCTCCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
3UTR TCA 72 bp CACCCTGATGAGGCCCATCAGCTCTTGTCCACTCAGTaGGGCCAGACTTGTGCTCTAATCCACTCTCCTGTG +
Preference number: 3 (lower is better)
Translates to: HPDEAHQLLSTQ*GQTCALIHSPV
Trigger: CACAGGAGAGTGGATTAGAGCACAAGTCTGGCCTCACTGAGTGGACAAGAGCTGATGGGCCTCATCAGGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
3UTR CCA 72 bp CTGGCCTGTATGGCTTATACTGGGGAGCTGGGCCTCTaGGCTGTCCAAACCCAAGGGTCACACTTTGCTTTT +
Preference number: 3 (lower is better)
Translates to: LACMAYTGELGL*AVQTQGSHFAF
Trigger: AAAAGCAAAGTGTGACCCTTGGGTTTGGACAGCCCAGAGGCCCAGCTCCCCAGTATAAGCCATACAGGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
3UTR-3UTR CAA 90 bp AAAAGGTTCCCAGGTGGGGTCCTCTGCCCACTTTGCCACCACATTCACATTCCAGGAGCACACTCTTGGTaGGAGCTAGGCCTGAACATC +
Preference number: 3 (lower is better)
Translates to: KRFPGGVLCPLCHHIHIPGAHSW*ELGLNI
Trigger: GATGTTCAGGCCTAGCTCCAACCAAGAGTGTGCTCC...TGGAATGTGAATGTGGTGGCAAAGTGGGCAGAGGACCCCACCTGGGAACCTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
3UTR-3UTR CAA 90 bp GGTGATAAGGTGTCATGCGTTCTGCTGAACCCACTGGCTGGTATGAACATGAGGACAGGCAGCAGCTGGTaGCCTGGCTGGACATGGATT +
Preference number: 3 (lower is better)
Translates to: GDKVSCVLLNPLAGMNMRTGSSW*PGWTWI
Trigger: AATCCATGTCCAGCCAGGCAACCAGCTGCTGCCTGT...CCTCATGTTCATACCAGCCAGTGGGTTCAGCAGAACGCATGACACCTTATCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
3UTR GCA 72 bp GGCTGGACATGGATTTGCTGCACTGCAGATGTTTTCTaGAGACAAGGTCTGGAGCTGGAGCAGGAAACGGCA +
Preference number: 3 (lower is better)
Translates to: GWTWICCTADVF*RQGLELEQETA
Trigger: TGCCGTTTCCTGCTCCAGCTCCAGACCTTGTCTGCAGAAAACATCTGCAGTGCAGCAAATCCATGTCCAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
3UTR GCA 72 bp ACAGGCAGCAGCTGGTTGCCTGGCTGGACATGGATTTaGTGCACTGCAGATGTTTTCTGCAGACAAGGTCTG +
Preference number: 3 (lower is better)
Translates to: TGSSWLPGWTWI*CTADVFCRQGL
Trigger: CAGACCTTGTCTGCAGAAAACATCTGCAGTGCAGCAAATCCATGTCCAGCCAGGCAACCAGCTGCTGCCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
3UTR GCA 72 bp CAGAGCTCACCCAAGGAGGGAGGTGATAAGGTGTCATaGGTTCTGCTGAACCCACTGGCTGGTATGAACATG +
Preference number: 3 (lower is better)
Translates to: QSSPKEGGDKVS*VLLNPLAGMNM
Trigger: CATGTTCATACCAGCCAGTGGGTTCAGCAGAACGCATGACACCTTATCACCTCCCTCCTTGGGTGAGCTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
3UTR-3UTR CAA 90 bp GGTGATAAGGTGTCATGCGTTCTGCTGAACCCACTGGCTGGTATGAACATGAGGGGAGCACACTCTTGGTaGGAGCTAGGCCTGAACATC +
Preference number: 3 (lower is better)
Translates to: GDKVSCVLLNPLAGMNMRGAHSW*ELGLNI
Trigger: GATGTTCAGGCCTAGCTCCAACCAAGAGTGTGCTCC...CCTCATGTTCATACCAGCCAGTGGGTTCAGCAGAACGCATGACACCTTATCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
3UTR-3UTR CAA 90 bp AAAAGGTTCCCAGGTGGGGTCCTCTGCCCACTTTGCCACCACATTCACATTCCAATCTGGAGCACACTCTaGGTTGGAGCTAGGCCTGAA +
Preference number: 3 (lower is better)
Translates to: KRFPGGVLCPLCHHIHIPIWSTL*VGARPE
Trigger: TTCAGGCCTAGCTCCAACCAAGAGTGTGCTCCAGAT...TGGAATGTGAATGTGGTGGCAAAGTGGGCAGAGGACCCCACCTGGGAACCTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
3UTR-3UTR CAA 90 bp CTTGTCCACTCAGTGAGGCCAGACTTGTGCTCTAATCCACTCTCCTGTGGGTCCTGGCTGGACATGGATTaGCTGCACTGCAGATGTTTT +
Preference number: 3 (lower is better)
Translates to: LVHSVRPDLCSNPLSCGSWLDMD*LHCRCF
Trigger: AAAACATCTGCAGTGCAGCAAATCCATGTCCAGCCA...GGACCCACAGGAGAGTGGATTAGAGCACAAGTCTGGCCTCACTGAGTGGACAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
3UTR-3UTR CAA 90 bp ACCAAGGCTGCTGTACCCACCTCAGGGACAGAACTCCACACTATAGTGGGAAAGTGGCTGGACATGGATTaGCTGCACTGCAGATGTTTT +
Preference number: 3 (lower is better)
Translates to: TKAAVPTSGTELHTIVGKWLDMD*LHCRCF
Trigger: AAAACATCTGCAGTGCAGCAAATCCATGTCCAGCCA...CTTTCCCACTATAGTGTGGAGTTCTGTCCCTGAGGTGGGTACAGCAGCCTTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
3UTR-3UTR CAA 90 bp AAACTTTTCCCAGAGAAGAACTCTTTGTTGTCCCCGCTCAGCTGTAATTCTGCCGGAGCACACTCTTGGTaGGAGCTAGGCCTGAACATC +
Preference number: 3 (lower is better)
Translates to: KLFPEKNSLLSPLSCNSAGAHSW*ELGLNI
Trigger: GATGTTCAGGCCTAGCTCCAACCAAGAGTGTGCTCC...GGCAGAATTACAGCTGAGCGGGGACAACAAAGAGTTCTTCTCTGGGAAAAGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
3UTR GCA 72 bp ACTATTCTTATTCTCAACCCCCAGAGGAACCAAGGCTaGTGTACCCACCTCAGGGACAGAACTCCACACTAT +
Preference number: 3 (lower is better)
Translates to: TILILNPQRNQG*CTHLRDRTPHY
Trigger: ATAGTGTGGAGTTCTGTCCCTGAGGTGGGTACAGCAGCCTTGGTTCCTCTGGGGGTTGAGAATAAGAATAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
3UTR-3UTR CAA 90 bp AAGGTGTCATGCGTTCTGCTGAACCCACTGGCTGGTATGAACATGAGGCTTGGGCAAAAAGAATGGTGTTaGCTGTGGTCCTTTCCTTTC +
Preference number: 3 (lower is better)
Translates to: KVSCVLLNPLAGMNMRLGQKEWC*LWSFPF
Trigger: GAAAGGAAAGGACCACAGCAAACACCATTCTTTTTG...CCCAAGCCTCATGTTCATACCAGCCAGTGGGTTCAGCAGAACGCATGACACCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
3UTR-3UTR CAA 90 bp ACCAAGGCTGCTGTACCCACCTCAGGGACAGAACTCCACACTATAGTGGGAAAGCAAAAAGAATGGTGTTaGCTGTGGTCCTTTCCTTTC +
Preference number: 3 (lower is better)
Translates to: TKAAVPTSGTELHTIVGKQKEWC*LWSFPF
Trigger: GAAAGGAAAGGACCACAGCAAACACCATTCTTTTTG...CTTTCCCACTATAGTGTGGAGTTCTGTCCCTGAGGTGGGTACAGCAGCCTTGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
3UTR-3UTR CAA 90 bp TCCTTCCTCTGCCCAGATAAAGTCCAGCAGAAATTCCTCCTTTCTACCTCTCTGCAAAAAGAATGGTGTTaGCTGTGGTCCTTTCCTTTC +
Preference number: 3 (lower is better)
Translates to: SFLCPDKVQQKFLLSTSLQKEWC*LWSFPF
Trigger: GAAAGGAAAGGACCACAGCAAACACCATTCTTTTTG...CAGAGAGGTAGAAAGGAGGAATTTCTGCTGGACTTTATCTGGGCAGAGGAAGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
3UTR CCA 72 bp ATAAAGTCCAGCAGAAATTCCTCCTTTCTACCTCTCTaGGACTCTGAGACAGGAAATCTTCAAGGAGGAGTT +
Preference number: 3 (lower is better)
Translates to: IKSSRNSSFLPL*DSETGNLQGGV
Trigger: AACTCCTCCTTGAAGATTTCCTGTCTCAGAGTCCCAGAGAGGTAGAAAGGAGGAATTTCTGCTGGACTTTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
3UTR-3UTR CAA 90 bp AGAACTCTTTGTTGTCCCCGCTCAGCTGTAATTCTGCCTTTTCTACCTTCATTCCAAAAAGAATGGTGTTaGCTGTGGTCCTTTCCTTTC +
Preference number: 3 (lower is better)
Translates to: RTLCCPRSAVILPFLPSFQKEWC*LWSFPF
Trigger: GAAAGGAAAGGACCACAGCAAACACCATTCTTTTTG...GAATGAAGGTAGAAAAGGCAGAATTACAGCTGAGCGGGGACAACAAAGAGTTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR GCA 90 bp GAGGGGCCAAGAGTGGTCAGGCTGCCCTGGGGTGAATGTCACCCTGATGAGGCCCACCCCGGGCCTGCCTaGAGCTGGCCTGGTACCTCC +
Preference number: 4 (lower is better)
Translates to: EGPRVVRLPWGECHPDEAHPGPA*SWPGTS
Trigger: GGAGGTACCAGGCCAGCTGCAGGCAGGCCCGGGGTG...GGCCTCATCAGGGTGACATTCACCCCAGGGCAGCCTGACCACTCTTGGCCCCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR TCA 90 bp GAGGGGCCAAGAGTGGTCAGGCTGCCCTGGGGTGAATGTCACCCTGATGAGGCCGCTCTGGGGAAGCGGTaGTGCCGAGGGCCCATGCCT +
Preference number: 4 (lower is better)
Translates to: EGPRVVRLPWGECHPDEAALGKR*CRGPMP
Trigger: AGGCATGGGCCCTCGGCATCACCGCTTCCCCAGAGC...GGCCTCATCAGGGTGACATTCACCCCAGGGCAGCCTGACCACTCTTGGCCCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp GAGGGGCCAAGAGTGGTCAGGCTGCCCTGGGGTGAATGTCACCCTGATGAGGCCGGCCCTGGGGCACTGTaGGTTAGAGAGCCGCCCCGA +
Preference number: 4 (lower is better)
Translates to: EGPRVVRLPWGECHPDEAGPGAL*VREPPR
Trigger: TCGGGGCGGCTCTCTAACCCACAGTGCCCCAGGGCC...GGCCTCATCAGGGTGACATTCACCCCAGGGCAGCCTGACCACTCTTGGCCCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp GAGGGGCCAAGAGTGGTCAGGCTGCCCTGGGGTGAATGTCACCCTGATGAGGCCGCTGGAGGCGTCAACTaGGCCAGGGGCTGGCTCAGG +
Preference number: 4 (lower is better)
Translates to: EGPRVVRLPWGECHPDEAAGGVN*ARGWLR
Trigger: CCTGAGCCAGCCCCTGGCCCAGTTGACGCCTCCAGC...GGCCTCATCAGGGTGACATTCACCCCAGGGCAGCCTGACCACTCTTGGCCCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR GCA 90 bp GAGGGGCCAAGAGTGGTCAGGCTGCCCTGGGGTGAATGTCACCCTGATGAGGCCGTCAGCCCCAGCGGCTaGTGCAGCTGCTCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: EGPRVVRLPWGECHPDEAVSPSG*CSCSAA
Trigger: TGCTGCTGAGCAGCTGCAGCAGCCGCTGGGGCTGAC...GGCCTCATCAGGGTGACATTCACCCCAGGGCAGCCTGACCACTCTTGGCCCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR GCA 90 bp TGCCCTCAAAAACTCAGCCTTCAAGGGATCCAGCCCACACACGCCACAGGCAGCCCTGCCAGGCGCTGCTaGTCTCCTGGAGCCCGGGGA +
Preference number: 4 (lower is better)
Translates to: CPQKLSLQGIQPTHATGSPARRC*SPGARG
Trigger: TCCCCGGGCTCCAGGAGAGCAGCAGCGCCTGGCAGG...GCTGCCTGTGGCGTGTGTGGGCTGGATCCCTTGAAGGCTGAGTTTTTGAGGGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR GCA 90 bp AGGGGCCAAGAGTGGTCAGGCTGCCCTGGGGTGAATGTCACCCTGATGAGGCCCCAGTCCCCAGCCTTGTaGATAGGGGTGCTGGGCTCC +
Preference number: 4 (lower is better)
Translates to: RGQEWSGCPGVNVTLMRPQSPAL*IGVLGS
Trigger: GGAGCCCAGCACCCCTATGCACAAGGCTGGGGACTG...GGGCCTCATCAGGGTGACATTCACCCCAGGGCAGCCTGACCACTCTTGGCCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR GCA 90 bp AGGGGCCAAGAGTGGTCAGGCTGCCCTGGGGTGAATGTCACCCTGATGAGGCCCCTGGGCCAGGCTTCCTaGCATGCCACTGGAACCGCT +
Preference number: 4 (lower is better)
Translates to: RGQEWSGCPGVNVTLMRPLGQAS*HATGTA
Trigger: AGCGGTTCCAGTGGCATGGCAGGAAGCCTGGCCCAG...GGGCCTCATCAGGGTGACATTCACCCCAGGGCAGCCTGACCACTCTTGGCCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp AGGGGCCAAGAGTGGTCAGGCTGCCCTGGGGTGAATGTCACCCTGATGAGGCCCGGGGATGTGCAGCTCTaGGGAAGCGGTGATGCCGAG +
Preference number: 4 (lower is better)
Translates to: RGQEWSGCPGVNVTLMRPGDVQL*GSGDAE
Trigger: CTCGGCATCACCGCTTCCCCAGAGCTGCACATCCCC...GGGCCTCATCAGGGTGACATTCACCCCAGGGCAGCCTGACCACTCTTGGCCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp GAGGGGCCAAGAGTGGTCAGGCTGCCCTGGGGTGAATGTCACCCTGATGAGGCCGGGGATGTGCAGCTCTaGGGAAGCGGTGATGCCGAG +
Preference number: 4 (lower is better)
Translates to: EGPRVVRLPWGECHPDEAGDVQL*GSGDAE
Trigger: CTCGGCATCACCGCTTCCCCAGAGCTGCACATCCCC...GGCCTCATCAGGGTGACATTCACCCCAGGGCAGCCTGACCACTCTTGGCCCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp GAGGGGCCAAGAGTGGTCAGGCTGCCCTGGGGTGAATGTCACCCTGATGAGGCCGGGGACTCCGGTTTCTaGGCCAGGCTTCCTGCCATG +
Preference number: 4 (lower is better)
Translates to: EGPRVVRLPWGECHPDEAGDSGF*ARLPAM
Trigger: CATGGCAGGAAGCCTGGCCCAGAAACCGGAGTCCCC...GGCCTCATCAGGGTGACATTCACCCCAGGGCAGCCTGACCACTCTTGGCCCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp GAGGGGCCAAGAGTGGTCAGGCTGCCCTGGGGTGAATGTCACCCTGATGAGGCCGTGCGGATAAGGGCATaGCCTGCCCTCTGCGGTGTC +
Preference number: 4 (lower is better)
Translates to: EGPRVVRLPWGECHPDEAVRIRA*PALCGV
Trigger: GACACCGCAGAGGGCAGGCCATGCCCTTATCCGCAC...GGCCTCATCAGGGTGACATTCACCCCAGGGCAGCCTGACCACTCTTGGCCCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR TCA 90 bp GAGGGGCCAAGAGTGGTCAGGCTGCCCTGGGGTGAATGTCACCCTGATGAGGCCCATGGAGGCAGGAAATaGCCCGTAGCTCCTGCCCCT +
Preference number: 4 (lower is better)
Translates to: EGPRVVRLPWGECHPDEAHGGRK*PVAPAP
Trigger: AGGGGCAGGAGCTACGGGTCATTTCCTGCCTCCATG...GGCCTCATCAGGGTGACATTCACCCCAGGGCAGCCTGACCACTCTTGGCCCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR TCA 90 bp GAGGGGCCAAGAGTGGTCAGGCTGCCCTGGGGTGAATGTCACCCTGATGAGGCCCGGGATGCTGGCGAATaGGGTGGAGTCTTCGACCTG +
Preference number: 4 (lower is better)
Translates to: EGPRVVRLPWGECHPDEARDAGE*GGVFDL
Trigger: CAGGTCGAAGACTCCACCTCATTCGCCAGCATCCCG...GGCCTCATCAGGGTGACATTCACCCCAGGGCAGCCTGACCACTCTTGGCCCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR TCA 90 bp TGCCCTCAAAAACTCAGCCTTCAAGGGATCCAGCCCACACACGCCACAGGCAGCGCTCTGGGGAAGCGGTaGTGCCGAGGGCCCATGCCT +
Preference number: 4 (lower is better)
Translates to: CPQKLSLQGIQPTHATGSALGKR*CRGPMP
Trigger: AGGCATGGGCCCTCGGCATCACCGCTTCCCCAGAGC...GCTGCCTGTGGCGTGTGTGGGCTGGATCCCTTGAAGGCTGAGTTTTTGAGGGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR GCA 90 bp GGAGCTGGGCCTCTGGGCTGTCCAAACCCAAGGGTCACACTTTGCTTTTCCTTTGAAGCGGATCCGGCCTaGTGTGGCGGGGGCGGCACC +
Preference number: 4 (lower is better)
Translates to: GAGPLGCPNPRVTLCFSFEADPA*CGGGGT
Trigger: GGTGCCGCCCCCGCCACAGCAGGCCGGATCCGCTTC...AAAGGAAAAGCAAAGTGTGACCCTTGGGTTTGGACAGCCCAGAGGCCCAGCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR GCA 90 bp CAGATGTTTTCTGCAGACAAGGTCTGGAGCTGGAGCAGGAAACGGCACCCTCTCGAAGCGGATCCGGCCTaGTGTGGCGGGGGCGGCACC +
Preference number: 4 (lower is better)
Translates to: QMFSADKVWSWSRKRHPLEADPA*CGGGGT
Trigger: GGTGCCGCCCCCGCCACAGCAGGCCGGATCCGCTTC...GAGAGGGTGCCGTTTCCTGCTCCAGCTCCAGACCTTGTCTGCAGAAAACATCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR GCA 90 bp TGCCCTCAAAAACTCAGCCTTCAAGGGATCCAGCCCACACACGCCACAGGCAGCTGGGGGCCGAGCCACTaGACTCCGGGAAGGGCCCAA +
Preference number: 4 (lower is better)
Translates to: CPQKLSLQGIQPTHATGSWGPSH*TPGRAQ
Trigger: TTGGGCCCTTCCCGGAGTGCAGTGGCTCGGCCCCCA...GCTGCCTGTGGCGTGTGTGGGCTGGATCCCTTGAAGGCTGAGTTTTTGAGGGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR GCA 90 bp ACTCAGCCTTCAAGGGATCCAGCCCACACACGCCACAGGCAGCAGCTGGTTGCCCAGTCCCCAGCCTTGTaGATAGGGGTGCTGGGCTCC +
Preference number: 4 (lower is better)
Translates to: TQPSRDPAHTRHRQQLVAQSPAL*IGVLGS
Trigger: GGAGCCCAGCACCCCTATGCACAAGGCTGGGGACTG...GGCAACCAGCTGCTGCCTGTGGCGTGTGTGGGCTGGATCCCTTGAAGGCTGAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR GCA 90 bp GAGGGGCCAAGAGTGGTCAGGCTGCCCTGGGGTGAATGTCACCCTGATGAGGCCACTGGCTGGCCCATCTaGCAGGTACCCACTGCGTTC +
Preference number: 4 (lower is better)
Translates to: EGPRVVRLPWGECHPDEATGWPI*QVPTAF
Trigger: GAACGCAGTGGGTACCTGGCAGATGGGCCAGCCAGT...GGCCTCATCAGGGTGACATTCACCCCAGGGCAGCCTGACCACTCTTGGCCCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR GCA 90 bp ACTCAGCCTTCAAGGGATCCAGCCCACACACGCCACAGGCAGCAGCTGGTTGCCCTGGGCCAGGCTTCCTaGCATGCCACTGGAACCGCT +
Preference number: 4 (lower is better)
Translates to: TQPSRDPAHTRHRQQLVALGQAS*HATGTA
Trigger: AGCGGTTCCAGTGGCATGGCAGGAAGCCTGGCCCAG...GGCAACCAGCTGCTGCCTGTGGCGTGTGTGGGCTGGATCCCTTGAAGGCTGAGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR GCA 90 bp ACTCAGCCTTCAAGGGATCCAGCCCACACACGCCACAGGCAGCAGCTGGTTGCCAGCTGGGTGCACAGTTaGATCCTGGGGCCGAGAGCC +
Preference number: 4 (lower is better)
Translates to: TQPSRDPAHTRHRQQLVASWVHS*ILGPRA
Trigger: GGCTCTCGGCCCCAGGATGCAACTGTGCACCCAGCT...GGCAACCAGCTGCTGCCTGTGGCGTGTGTGGGCTGGATCCCTTGAAGGCTGAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp TGCCCTCAAAAACTCAGCCTTCAAGGGATCCAGCCCACACACGCCACAGGCAGCGCGCTGCTGCTCTCCTaGAGCCCGGGGATGTGCAGC +
Preference number: 4 (lower is better)
Translates to: CPQKLSLQGIQPTHATGSALLLS*SPGMCS
Trigger: GCTGCACATCCCCGGGCTCCAGGAGAGCAGCAGCGC...GCTGCCTGTGGCGTGTGTGGGCTGGATCCCTTGAAGGCTGAGTTTTTGAGGGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp GAGGGGCCAAGAGTGGTCAGGCTGCCCTGGGGTGAATGTCACCCTGATGAGGCCATAGGAGGCCTGGACTaGGGGACTCCGGTTTCTGGG +
Preference number: 4 (lower is better)
Translates to: EGPRVVRLPWGECHPDEAIGGLD*GTPVSG
Trigger: CCCAGAAACCGGAGTCCCCCAGTCCAGGCCTCCTAT...GGCCTCATCAGGGTGACATTCACCCCAGGGCAGCCTGACCACTCTTGGCCCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR GCA 90 bp GAGGGGCCAAGAGTGGTCAGGCTGCCCTGGGGTGAATGTCACCCTGATGAGGCCTGTGCGTCCAAAGCCTaGCTGCAGGGTAGCCATCAG +
Preference number: 4 (lower is better)
Translates to: EGPRVVRLPWGECHPDEACASKA*LQGSHQ
Trigger: CTGATGGCTACCCTGCAGGCAGGCTTTGGACGCACA...GGCCTCATCAGGGTGACATTCACCCCAGGGCAGCCTGACCACTCTTGGCCCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR GCA 90 bp AGGGGCCAAGAGTGGTCAGGCTGCCCTGGGGTGAATGTCACCCTGATGAGGCCCCCAGTACCAGTCCTGTaGGTCCAAAGCCTGCCTGCA +
Preference number: 4 (lower is better)
Translates to: RGQEWSGCPGVNVTLMRPPVPVL*VQSLPA
Trigger: TGCAGGCAGGCTTTGGACGCACAGGACTGGTACTGG...GGGCCTCATCAGGGTGACATTCACCCCAGGGCAGCCTGACCACTCTTGGCCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR GCA 90 bp GAGGGGCCAAGAGTGGTCAGGCTGCCCTGGGGTGAATGTCACCCTGATGAGGCCCGTCATCACTGGCATTaGACAGGTACAGCGGGTGGG +
Preference number: 4 (lower is better)
Translates to: EGPRVVRLPWGECHPDEARHHWH*TGTAGG
Trigger: CCCACCCGCTGTACCTGTGCAATGCCAGTGATGACG...GGCCTCATCAGGGTGACATTCACCCCAGGGCAGCCTGACCACTCTTGGCCCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000584437.5
CDS-3UTR GCA 90 bp TGCCCTCAAAAACTCAGCCTTCAAGGGATCCAGCCCACACACGCCACAGGCAGCAGCCCCAGCGGCTGCTaGAGCTGCTCAGCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: CPQKLSLQGIQPTHATGSSPSGC*SCSAAA
Trigger: AGCTGCTGCTGAGCAGCTGCAGCAGCCGCTGGGGCT...GCTGCCTGTGGCGTGTGTGGGCTGGATCCCTTGAAGGCTGAGTTTTTGAGGGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR GCA 90 bp CTTGTCCACTCAGTGAGGCCAGACTTGTGCTCTAATCCACTCTCCTGTGGGTCCGGGGGCGGCACCGGATaGGCAGCACCGAAGCCAGGA +
Preference number: 4 (lower is better)
Translates to: LVHSVRPDLCSNPLSCGSGGGTG*AAPKPG
Trigger: TCCTGGCTTCGGTGCTGCGCATCCGGTGCCGCCCCC...GGACCCACAGGAGAGTGGATTAGAGCACAAGTCTGGCCTCACTGAGTGGACAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR GCA 90 bp CACTGCAGATGTTTTCTGCAGACAAGGTCTGGAGCTGGAGCAGGAAACGGCACCGGGGGCGGCACCGGATaGGCAGCACCGAAGCCAGGA +
Preference number: 4 (lower is better)
Translates to: HCRCFLQTRSGAGAGNGTGGGTG*AAPKPG
Trigger: TCCTGGCTTCGGTGCTGCGCATCCGGTGCCGCCCCC...GGTGCCGTTTCCTGCTCCAGCTCCAGACCTTGTCTGCAGAAAACATCTGCAGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR GCA 90 bp CACTGCAGATGTTTTCTGCAGACAAGGTCTGGAGCTGGAGCAGGAAACGGCACCCACCCCGGGCCTGCCTaGAGCTGGCCTGGTACCTCC +
Preference number: 4 (lower is better)
Translates to: HCRCFLQTRSGAGAGNGTHPGPA*SWPGTS
Trigger: GGAGGTACCAGGCCAGCTGCAGGCAGGCCCGGGGTG...GGTGCCGTTTCCTGCTCCAGCTCCAGACCTTGTCTGCAGAAAACATCTGCAGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR GCA 90 bp CTTGTCCACTCAGTGAGGCCAGACTTGTGCTCTAATCCACTCTCCTGTGGGTCCCACCCCGGGCCTGCCTaGAGCTGGCCTGGTACCTCC +
Preference number: 4 (lower is better)
Translates to: LVHSVRPDLCSNPLSCGSHPGPA*SWPGTS
Trigger: GGAGGTACCAGGCCAGCTGCAGGCAGGCCCGGGGTG...GGACCCACAGGAGAGTGGATTAGAGCACAAGTCTGGCCTCACTGAGTGGACAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR GCA 90 bp ACTCAGCCTTCAAGGGATCCAGCCCACACACGCCACAGGCAGCAGCTGGTTGCCACTGGCTGGCCCATCTaGCAGGTACCCACTGCGTTC +
Preference number: 4 (lower is better)
Translates to: TQPSRDPAHTRHRQQLVATGWPI*QVPTAF
Trigger: GAACGCAGTGGGTACCTGGCAGATGGGCCAGCCAGT...GGCAACCAGCTGCTGCCTGTGGCGTGTGTGGGCTGGATCCCTTGAAGGCTGAGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR GCA 90 bp GAGGGGCCAAGAGTGGTCAGGCTGCCCTGGGGTGAATGTCACCCTGATGAGGCCGATAAGGGCATGGCCTaGCCTCTGCGGTGTCAGAAC +
Preference number: 4 (lower is better)
Translates to: EGPRVVRLPWGECHPDEADKGMA*PLRCQN
Trigger: GTTCTGACACCGCAGAGGGCAGGCCATGCCCTTATC...GGCCTCATCAGGGTGACATTCACCCCAGGGCAGCCTGACCACTCTTGGCCCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp GAGGGAGGTGATAAGGTGTCATGCGTTCTGCTGAACCCACTGGCTGGTATGAACGGATCCGGCCTGCTGTaGCGGGGGCGGCACCGGATG +
Preference number: 4 (lower is better)
Translates to: EGGDKVSCVLLNPLAGMNGSGLL*RGRHRM
Trigger: CATCCGGTGCCGCCCCCGCCACAGCAGGCCGGATCC...GTTCATACCAGCCAGTGGGTTCAGCAGAACGCATGACACCTTATCACCTCCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp GAGGGGCCAAGAGTGGTCAGGCTGCCCTGGGGTGAATGTCACCCTGATGAGGCCACTCCTCCAGACAGATaGCACACACAGGGGCTGAGC +
Preference number: 4 (lower is better)
Translates to: EGPRVVRLPWGECHPDEATPPDR*HTQGLS
Trigger: GCTCAGCCCCTGTGTGTGCCATCTGTCTGGAGGAGT...GGCCTCATCAGGGTGACATTCACCCCAGGGCAGCCTGACCACTCTTGGCCCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp TGCCCTCAAAAACTCAGCCTTCAAGGGATCCAGCCCACACACGCCACAGGCAGCGCCTGGCTCCTGGGATaGCAGGAAGGGACCAGGTCG +
Preference number: 4 (lower is better)
Translates to: CPQKLSLQGIQPTHATGSAWLLG*QEGTRS
Trigger: CGACCTGGTCCCTTCCTGCCATCCCAGGAGCCAGGC...GCTGCCTGTGGCGTGTGTGGGCTGGATCCCTTGAAGGCTGAGTTTTTGAGGGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp GGAGCTGGGCCTCTGGGCTGTCCAAACCCAAGGGTCACACTTTGCTTTTCCTTTTGCTGTCAGGGGGCCTaGCCCGGCGTAGGGGCACTG +
Preference number: 4 (lower is better)
Translates to: GAGPLGCPNPRVTLCFSFCCQGA*PGVGAL
Trigger: CAGTGCCCCTACGCCGGGCCAGGCCCCCTGACAGCA...AAAGGAAAAGCAAAGTGTGACCCTTGGGTTTGGACAGCCCAGAGGCCCAGCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp ACTGAGGGAAAAAGGTTCCCAGGTGGGGTCCTCTGCCCACTTTGCCACCACATTTGCTGTCAGGGGGCCTaGCCCGGCGTAGGGGCACTG +
Preference number: 4 (lower is better)
Translates to: TEGKRFPGGVLCPLCHHICCQGA*PGVGAL
Trigger: CAGTGCCCCTACGCCGGGCCAGGCCCCCTGACAGCA...AATGTGGTGGCAAAGTGGGCAGAGGACCCCACCTGGGAACCTTTTTCCCTCAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp GAGGGGCCAAGAGTGGTCAGGCTGCCCTGGGGTGAATGTCACCCTGATGAGGCCGAAGGTGGCTCTGGCTaGGGCTGTGTCCGAGGAATA +
Preference number: 4 (lower is better)
Translates to: EGPRVVRLPWGECHPDEAEGGSG*GCVRGI
Trigger: TATTCCTCGGACACAGCCCCAGCCAGAGCCACCTTC...GGCCTCATCAGGGTGACATTCACCCCAGGGCAGCCTGACCACTCTTGGCCCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp GAGGGGCCAAGAGTGGTCAGGCTGCCCTGGGGTGAATGTCACCCTGATGAGGCCCAAGGGGTGTGCCTCTaGGGACCAAGGATATGCCAC +
Preference number: 4 (lower is better)
Translates to: EGPRVVRLPWGECHPDEAQGVCL*GPRICH
Trigger: GTGGCATATCCTTGGTCCCCAGAGGCACACCCCTTG...GGCCTCATCAGGGTGACATTCACCCCAGGGCAGCCTGACCACTCTTGGCCCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp GAGGGGCCAAGAGTGGTCAGGCTGCCCTGGGGTGAATGTCACCCTGATGAGGCCCCTCTTGTCCAGGCCTaGAGGTCCACAGATCAAGGG +
Preference number: 4 (lower is better)
Translates to: EGPRVVRLPWGECHPDEAPLVQA*RSTDQG
Trigger: CCCTTGATCTGTGGACCTCCAGGCCTGGACAAGAGG...GGCCTCATCAGGGTGACATTCACCCCAGGGCAGCCTGACCACTCTTGGCCCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp GAGGGGCCAAGAGTGGTCAGGCTGCCCTGGGGTGAATGTCACCCTGATGAGGCCCTGTATGGCTTATACTaGGGAGCTGGGCCTCTGGGC +
Preference number: 4 (lower is better)
Translates to: EGPRVVRLPWGECHPDEALYGLY*GAGPLG
Trigger: GCCCAGAGGCCCAGCTCCCCAGTATAAGCCATACAG...GGCCTCATCAGGGTGACATTCACCCCAGGGCAGCCTGACCACTCTTGGCCCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR TCA 90 bp AGGGGCCAAGAGTGGTCAGGCTGCCCTGGGGTGAATGTCACCCTGATGAGGCCCGCACCGAAGCCAGGATaGTCACAAAGATGGTGCCCA +
Preference number: 4 (lower is better)
Translates to: RGQEWSGCPGVNVTLMRPAPKPG*SQRWCP
Trigger: TGGGCACCATCTTTGTGATCATCCTGGCTTCGGTGC...GGGCCTCATCAGGGTGACATTCACCCCAGGGCAGCCTGACCACTCTTGGCCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR TCA 90 bp TGCCCTCAAAAACTCAGCCTTCAAGGGATCCAGCCCACACACGCCACAGGCAGCCAGGCTGTTCTCTGCTaGAGCGGATCCGGCCTGCTG +
Preference number: 4 (lower is better)
Translates to: CPQKLSLQGIQPTHATGSQAVLC*SGSGLL
Trigger: CAGCAGGCCGGATCCGCTTCAGCAGAGAACAGCCTG...GCTGCCTGTGGCGTGTGTGGGCTGGATCCCTTGAAGGCTGAGTTTTTGAGGGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR GCA 90 bp ACTCAGCCTTCAAGGGATCCAGCCCACACACGCCACAGGCAGCAGCTGGTTGCCTGTGCGTCCAAAGCCTaGCTGCAGGGTAGCCATCAG +
Preference number: 4 (lower is better)
Translates to: TQPSRDPAHTRHRQQLVACASKA*LQGSHQ
Trigger: CTGATGGCTACCCTGCAGGCAGGCTTTGGACGCACA...GGCAACCAGCTGCTGCCTGTGGCGTGTGTGGGCTGGATCCCTTGAAGGCTGAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR GCA 90 bp AGCAGCTGGTTGCCTGGCTGGACATGGATTTGCTGCACTGCAGATGTTTTCTGCGGGGGCGGCACCGGATaGGCAGCACCGAAGCCAGGA +
Preference number: 4 (lower is better)
Translates to: SSWLPGWTWICCTADVFCGGGTG*AAPKPG
Trigger: TCCTGGCTTCGGTGCTGCGCATCCGGTGCCGCCCCC...GCAGAAAACATCTGCAGTGCAGCAAATCCATGTCCAGCCAGGCAACCAGCTGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR GCA 90 bp CACTGCAGATGTTTTCTGCAGACAAGGTCTGGAGCTGGAGCAGGAAACGGCACCCACTCACCCCGGGCCTaGCTGCAGCTGGCCTGGTAC +
Preference number: 4 (lower is better)
Translates to: HCRCFLQTRSGAGAGNGTHSPRA*LQLAWY
Trigger: GTACCAGGCCAGCTGCAGGCAGGCCCGGGGTGAGTG...GGTGCCGTTTCCTGCTCCAGCTCCAGACCTTGTCTGCAGAAAACATCTGCAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR GCA 90 bp ACTCAGCCTTCAAGGGATCCAGCCCACACACGCCACAGGCAGCAGCTGGTTGCCATGACCCGTAGCTCCTaGCCCTCAGAGAACTCCTCC +
Preference number: 4 (lower is better)
Translates to: TQPSRDPAHTRHRQQLVAMTRSS*PSENSS
Trigger: GGAGGAGTTCTCTGAGGGGCAGGAGCTACGGGTCAT...GGCAACCAGCTGCTGCCTGTGGCGTGTGTGGGCTGGATCCCTTGAAGGCTGAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR GCA 90 bp ACCAAGGCTGCTGTACCCACCTCAGGGACAGAACTCCACACTATAGTGGGAAAGGCTCCTGCCAGGCGCTaGTGCTCTCCTGGAGCCCGG +
Preference number: 4 (lower is better)
Translates to: TKAAVPTSGTELHTIVGKAPARR*CSPGAR
Trigger: CCGGGCTCCAGGAGAGCAGCAGCGCCTGGCAGGAGC...CTTTCCCACTATAGTGTGGAGTTCTGTCCCTGAGGTGGGTACAGCAGCCTTGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR GCA 90 bp AGGCAGCAGCTGGTTGCCTGGCTGGACATGGATTTGCTGCACTGCAGATGTTTTGCTCCTGCCAGGCGCTaGTGCTCTCCTGGAGCCCGG +
Preference number: 4 (lower is better)
Translates to: RQQLVAWLDMDLLHCRCFAPARR*CSPGAR
Trigger: CCGGGCTCCAGGAGAGCAGCAGCGCCTGGCAGGAGC...AAAACATCTGCAGTGCAGCAAATCCATGTCCAGCCAGGCAACCAGCTGCTGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR GCA 90 bp TGCCCTCAAAAACTCAGCCTTCAAGGGATCCAGCCCACACACGCCACAGGCAGCAGCTGGGTGCACAGTTaGATCCTGGGGCCGAGAGCC +
Preference number: 4 (lower is better)
Translates to: CPQKLSLQGIQPTHATGSSWVHS*ILGPRA
Trigger: GGCTCTCGGCCCCAGGATGCAACTGTGCACCCAGCT...GCTGCCTGTGGCGTGTGTGGGCTGGATCCCTTGAAGGCTGAGTTTTTGAGGGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp CCTGGCTGGACATGGATTTGCTGCACTGCAGATGTTTTCTGCAGACAAGGTCTGGGATCCGGCCTGCTGTaGCGGGGGCGGCACCGGATG +
Preference number: 4 (lower is better)
Translates to: PGWTWICCTADVFCRQGLGSGLL*RGRHRM
Trigger: CATCCGGTGCCGCCCCCGCCACAGCAGGCCGGATCC...CAGACCTTGTCTGCAGAAAACATCTGCAGTGCAGCAAATCCATGTCCAGCCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp ACTCAGCCTTCAAGGGATCCAGCCCACACACGCCACAGGCAGCAGCTGGTTGCCCAGGGTGCTGTGAGGTaGATTGGAGGTGGCTCAGTC +
Preference number: 4 (lower is better)
Translates to: TQPSRDPAHTRHRQQLVAQGAVR*IGGGSV
Trigger: GACTGAGCCACCTCCAATCCACCTCACAGCACCCTG...GGCAACCAGCTGCTGCCTGTGGCGTGTGTGGGCTGGATCCCTTGAAGGCTGAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp ACCAAGGCTGCTGTACCCACCTCAGGGACAGAACTCCACACTATAGTGGGAAAGTGCTGTCAGGGGGCCTaGCCCGGCGTAGGGGCACTG +
Preference number: 4 (lower is better)
Translates to: TKAAVPTSGTELHTIVGKCCQGA*PGVGAL
Trigger: CAGTGCCCCTACGCCGGGCCAGGCCCCCTGACAGCA...CTTTCCCACTATAGTGTGGAGTTCTGTCCCTGAGGTGGGTACAGCAGCCTTGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp AGGCAGCAGCTGGTTGCCTGGCTGGACATGGATTTGCTGCACTGCAGATGTTTTTGCTGTCAGGGGGCCTaGCCCGGCGTAGGGGCACTG +
Preference number: 4 (lower is better)
Translates to: RQQLVAWLDMDLLHCRCFCCQGA*PGVGAL
Trigger: CAGTGCCCCTACGCCGGGCCAGGCCCCCTGACAGCA...AAAACATCTGCAGTGCAGCAAATCCATGTCCAGCCAGGCAACCAGCTGCTGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp ACTCAGCCTTCAAGGGATCCAGCCCACACACGCCACAGGCAGCAGCTGGTTGCCCTGATCAGGAGAAGGTaGCTCTGGCTGGGGCTGTGT +
Preference number: 4 (lower is better)
Translates to: TQPSRDPAHTRHRQQLVALIRRR*LWLGLC
Trigger: ACACAGCCCCAGCCAGAGCCACCTTCTCCTGATCAG...GGCAACCAGCTGCTGCCTGTGGCGTGTGTGGGCTGGATCCCTTGAAGGCTGAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp CTTGTCCACTCAGTGAGGCCAGACTTGTGCTCTAATCCACTCTCCTGTGGGTCCGCTGGAGGCGTCAACTaGGCCAGGGGCTGGCTCAGG +
Preference number: 4 (lower is better)
Translates to: LVHSVRPDLCSNPLSCGSAGGVN*ARGWLR
Trigger: CCTGAGCCAGCCCCTGGCCCAGTTGACGCCTCCAGC...GGACCCACAGGAGAGTGGATTAGAGCACAAGTCTGGCCTCACTGAGTGGACAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp TGCCCTCAAAAACTCAGCCTTCAAGGGATCCAGCCCACACACGCCACAGGCAGCGTGCGGATAAGGGCATaGCCTGCCCTCTGCGGTGTC +
Preference number: 4 (lower is better)
Translates to: CPQKLSLQGIQPTHATGSVRIRA*PALCGV
Trigger: GACACCGCAGAGGGCAGGCCATGCCCTTATCCGCAC...GCTGCCTGTGGCGTGTGTGGGCTGGATCCCTTGAAGGCTGAGTTTTTGAGGGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp ACTCAGCCTTCAAGGGATCCAGCCCACACACGCCACAGGCAGCAGCTGGTTGCCGACAAGGTCTGGAGCTaGAGCAGGAAACGGCACCCT +
Preference number: 4 (lower is better)
Translates to: TQPSRDPAHTRHRQQLVADKVWS*SRKRHP
Trigger: AGGGTGCCGTTTCCTGCTCCAGCTCCAGACCTTGTC...GGCAACCAGCTGCTGCCTGTGGCGTGTGTGGGCTGGATCCCTTGAAGGCTGAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR TCA 90 bp AGGCAGCAGCTGGTTGCCTGGCTGGACATGGATTTGCTGCACTGCAGATGTTTTGCTCTGGGGAAGCGGTaGTGCCGAGGGCCCATGCCT +
Preference number: 4 (lower is better)
Translates to: RQQLVAWLDMDLLHCRCFALGKR*CRGPMP
Trigger: AGGCATGGGCCCTCGGCATCACCGCTTCCCCAGAGC...AAAACATCTGCAGTGCAGCAAATCCATGTCCAGCCAGGCAACCAGCTGCTGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR TCA 90 bp CACTGCAGATGTTTTCTGCAGACAAGGTCTGGAGCTGGAGCAGGAAACGGCACCGCCATGACAGGGCCCTaGGCTGGAGTCACTGGCTGG +
Preference number: 4 (lower is better)
Translates to: HCRCFLQTRSGAGAGNGTAMTGP*AGVTGW
Trigger: CCAGCCAGTGACTCCAGCTCAGGGCCCTGTCATGGC...GGTGCCGTTTCCTGCTCCAGCTCCAGACCTTGTCTGCAGAAAACATCTGCAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR GCA 90 bp CTTGTCCACTCAGTGAGGCCAGACTTGTGCTCTAATCCACTCTCCTGTGGGTCCGTCAGCCCCAGCGGCTaGTGCAGCTGCTCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: LVHSVRPDLCSNPLSCGSVSPSG*CSCSAA
Trigger: TGCTGCTGAGCAGCTGCAGCAGCCGCTGGGGCTGAC...GGACCCACAGGAGAGTGGATTAGAGCACAAGTCTGGCCTCACTGAGTGGACAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR GCA 90 bp AAAGCTGGTGTTCAGAGCTCACCCAAGGAGGGAGGTGATAAGGTGTCATGCGTTGGGGGCGGCACCGGATaGGCAGCACCGAAGCCAGGA +
Preference number: 4 (lower is better)
Translates to: KAGVQSSPKEGGDKVSCVGGGTG*AAPKPG
Trigger: TCCTGGCTTCGGTGCTGCGCATCCGGTGCCGCCCCC...AACGCATGACACCTTATCACCTCCCTCCTTGGGTGAGCTCTGAACACCAGCTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR GCA 90 bp CCTGGCTGGACATGGATTTGCTGCACTGCAGATGTTTTCTGCAGACAAGGTCTGCACCCCGGGCCTGCCTaGAGCTGGCCTGGTACCTCC +
Preference number: 4 (lower is better)
Translates to: PGWTWICCTADVFCRQGLHPGPA*SWPGTS
Trigger: GGAGGTACCAGGCCAGCTGCAGGCAGGCCCGGGGTG...CAGACCTTGTCTGCAGAAAACATCTGCAGTGCAGCAAATCCATGTCCAGCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR GCA 90 bp AAAAGGTTCCCAGGTGGGGTCCTCTGCCCACTTTGCCACCACATTCACATTCCATGGGGGCCGAGCCACTaGACTCCGGGAAGGGCCCAA +
Preference number: 4 (lower is better)
Translates to: KRFPGGVLCPLCHHIHIPWGPSH*TPGRAQ
Trigger: TTGGGCCCTTCCCGGAGTGCAGTGGCTCGGCCCCCA...TGGAATGTGAATGTGGTGGCAAAGTGGGCAGAGGACCCCACCTGGGAACCTTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR GCA 90 bp AGCAGCTGGTTGCCTGGCTGGACATGGATTTGCTGCACTGCAGATGTTTTCTGCTGGGGGCCGAGCCACTaGACTCCGGGAAGGGCCCAA +
Preference number: 4 (lower is better)
Translates to: SSWLPGWTWICCTADVFCWGPSH*TPGRAQ
Trigger: TTGGGCCCTTCCCGGAGTGCAGTGGCTCGGCCCCCA...GCAGAAAACATCTGCAGTGCAGCAAATCCATGTCCAGCCAGGCAACCAGCTGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR GCA 90 bp CTTGTCCACTCAGTGAGGCCAGACTTGTGCTCTAATCCACTCTCCTGTGGGTCCGATGCCGAGGGCCCATaGCTGGCTCCTGGGATGGCA +
Preference number: 4 (lower is better)
Translates to: LVHSVRPDLCSNPLSCGSDAEGP*LAPGMA
Trigger: TGCCATCCCAGGAGCCAGGCATGGGCCCTCGGCATC...GGACCCACAGGAGAGTGGATTAGAGCACAAGTCTGGCCTCACTGAGTGGACAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR GCA 90 bp GGTGATAAGGTGTCATGCGTTCTGCTGAACCCACTGGCTGGTATGAACATGAGGCCTGCCAGGCGCTGCTaGTCTCCTGGAGCCCGGGGA +
Preference number: 4 (lower is better)
Translates to: GDKVSCVLLNPLAGMNMRPARRC*SPGARG
Trigger: TCCCCGGGCTCCAGGAGAGCAGCAGCGCCTGGCAGG...CCTCATGTTCATACCAGCCAGTGGGTTCAGCAGAACGCATGACACCTTATCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR GCA 90 bp AGGGGCCAAGAGTGGTCAGGCTGCCCTGGGGTGAATGTCACCCTGATGAGGCCCGGGGGTCAAAGTCACTaGTTAGGGAGCTGCAGAAAG +
Preference number: 4 (lower is better)
Translates to: RGQEWSGCPGVNVTLMRPGGQSH*LGSCRK
Trigger: CTTTCTGCAGCTCCCTAAGCAGTGACTTTGACCCCC...GGGCCTCATCAGGGTGACATTCACCCCAGGGCAGCCTGACCACTCTTGGCCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR GCA 90 bp AGGGGCCAAGAGTGGTCAGGCTGCCCTGGGGTGAATGTCACCCTGATGAGGCCCACAGATCAAGGGGTGTaGCTCTGGGGACCAAGGATA +
Preference number: 4 (lower is better)
Translates to: RGQEWSGCPGVNVTLMRPTDQGV*LWGPRI
Trigger: TATCCTTGGTCCCCAGAGGCACACCCCTTGATCTGT...GGGCCTCATCAGGGTGACATTCACCCCAGGGCAGCCTGACCACTCTTGGCCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp TGCCCTCAAAAACTCAGCCTTCAAGGGATCCAGCCCACACACGCCACAGGCAGCCAAAGAGGACAGCACTaGCTCCTCGCTCACCCGCCA +
Preference number: 4 (lower is better)
Translates to: CPQKLSLQGIQPTHATGSQRGQH*LLAHPP
Trigger: TGGCGGGTGAGCGAGGAGCCAGTGCTGTCCTCTTTG...GCTGCCTGTGGCGTGTGTGGGCTGGATCCCTTGAAGGCTGAGTTTTTGAGGGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp CTTGTCCACTCAGTGAGGCCAGACTTGTGCTCTAATCCACTCTCCTGTGGGTCCTGCCTGCAGCTGGCCTaGTACCTCCTGGTGGCCAGC +
Preference number: 4 (lower is better)
Translates to: LVHSVRPDLCSNPLSCGSCLQLA*YLLVAS
Trigger: GCTGGCCACCAGGAGGTACCAGGCCAGCTGCAGGCA...GGACCCACAGGAGAGTGGATTAGAGCACAAGTCTGGCCTCACTGAGTGGACAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp CAGATGTTTTCTGCAGACAAGGTCTGGAGCTGGAGCAGGAAACGGCACCCTCTCTGCCTGCAGCTGGCCTaGTACCTCCTGGTGGCCAGC +
Preference number: 4 (lower is better)
Translates to: QMFSADKVWSWSRKRHPLCLQLA*YLLVAS
Trigger: GCTGGCCACCAGGAGGTACCAGGCCAGCTGCAGGCA...GAGAGGGTGCCGTTTCCTGCTCCAGCTCCAGACCTTGTCTGCAGAAAACATCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp AAGGTGTCATGCGTTCTGCTGAACCCACTGGCTGGTATGAACATGAGGCTTGGGGGGCCTGCCTGCAGCTaGCCTGGTACCTCCTGGTGG +
Preference number: 4 (lower is better)
Translates to: KVSCVLLNPLAGMNMRLGGPACS*PGTSWW
Trigger: CCACCAGGAGGTACCAGGCCAGCTGCAGGCAGGCCC...CCCAAGCCTCATGTTCATACCAGCCAGTGGGTTCAGCAGAACGCATGACACCTT
60% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp CTTGTCCACTCAGTGAGGCCAGACTTGTGCTCTAATCCACTCTCCTGTGGGTCCGAAGGGACCAGGTCGTaGGGGCCGAGCCACTGCACT +
Preference number: 4 (lower is better)
Translates to: LVHSVRPDLCSNPLSCGSEGTRS*GPSHCT
Trigger: AGTGCAGTGGCTCGGCCCCCACGACCTGGTCCCTTC...GGACCCACAGGAGAGTGGATTAGAGCACAAGTCTGGCCTCACTGAGTGGACAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp AGGCAGCAGCTGGTTGCCTGGCTGGACATGGATTTGCTGCACTGCAGATGTTTTGCGCTGCTGCTCTCCTaGAGCCCGGGGATGTGCAGC +
Preference number: 4 (lower is better)
Translates to: RQQLVAWLDMDLLHCRCFALLLS*SPGMCS
Trigger: GCTGCACATCCCCGGGCTCCAGGAGAGCAGCAGCGC...AAAACATCTGCAGTGCAGCAAATCCATGTCCAGCCAGGCAACCAGCTGCTGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp GAGGGAGGTGATAAGGTGTCATGCGTTCTGCTGAACCCACTGGCTGGTATGAACGCGCTGCTGCTCTCCTaGAGCCCGGGGATGTGCAGC +
Preference number: 4 (lower is better)
Translates to: EGGDKVSCVLLNPLAGMNALLLS*SPGMCS
Trigger: GCTGCACATCCCCGGGCTCCAGGAGAGCAGCAGCGC...GTTCATACCAGCCAGTGGGTTCAGCAGAACGCATGACACCTTATCACCTCCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp ACTCAGCCTTCAAGGGATCCAGCCCACACACGCCACAGGCAGCAGCTGGTTGCCGTAGAACTGCTGCCATaGACCCCCTGTAGGCTGATG +
Preference number: 4 (lower is better)
Translates to: TQPSRDPAHTRHRQQLVAVELLP*TPCRLM
Trigger: CATCAGCCTACAGGGGGTCCATGGCAGCAGTTCTAC...GGCAACCAGCTGCTGCCTGTGGCGTGTGTGGGCTGGATCCCTTGAAGGCTGAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp ACTCAGCCTTCAAGGGATCCAGCCCACACACGCCACAGGCAGCAGCTGGTTGCCGGTAGTGGACATGGCTaGAAACCTGGGTTTCCCCTG +
Preference number: 4 (lower is better)
Translates to: TQPSRDPAHTRHRQQLVAGSGHG*KPGFPL
Trigger: CAGGGGAAACCCAGGTTTCCAGCCATGTCCACTACC...GGCAACCAGCTGCTGCCTGTGGCGTGTGTGGGCTGGATCCCTTGAAGGCTGAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp AAGGTGTCATGCGTTCTGCTGAACCCACTGGCTGGTATGAACATGAGGCTTGGGGGCCCTGGGGCACTGTaGGTTAGAGAGCCGCCCCGA +
Preference number: 4 (lower is better)
Translates to: KVSCVLLNPLAGMNMRLGGPGAL*VREPPR
Trigger: TCGGGGCGGCTCTCTAACCCACAGTGCCCCAGGGCC...CCCAAGCCTCATGTTCATACCAGCCAGTGGGTTCAGCAGAACGCATGACACCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp GAGGGAGGTGATAAGGTGTCATGCGTTCTGCTGAACCCACTGGCTGGTATGAACGCTGGAGGCGTCAACTaGGCCAGGGGCTGGCTCAGG +
Preference number: 4 (lower is better)
Translates to: EGGDKVSCVLLNPLAGMNAGGVN*ARGWLR
Trigger: CCTGAGCCAGCCCCTGGCCCAGTTGACGCCTCCAGC...GTTCATACCAGCCAGTGGGTTCAGCAGAACGCATGACACCTTATCACCTCCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp GGAGCTGGGCCTCTGGGCTGTCCAAACCCAAGGGTCACACTTTGCTTTTCCTTTTCCTCTGAGCCAGGCTaGGCCGACAGCACCTGGCAG +
Preference number: 4 (lower is better)
Translates to: GAGPLGCPNPRVTLCFSFSSEPG*ADSTWQ
Trigger: CTGCCAGGTGCTGTCGGCCCAGCCTGGCTCAGAGGA...AAAGGAAAAGCAAAGTGTGACCCTTGGGTTTGGACAGCCCAGAGGCCCAGCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp AGGGGCCAAGAGTGGTCAGGCTGCCCTGGGGTGAATGTCACCCTGATGAGGCCCTCTGGAGCACACTCTTaGTTGGAGCTAGGCCTGAAC +
Preference number: 4 (lower is better)
Translates to: RGQEWSGCPGVNVTLMRPSGAHS*LELGLN
Trigger: GTTCAGGCCTAGCTCCAACCAAGAGTGTGCTCCAGA...GGGCCTCATCAGGGTGACATTCACCCCAGGGCAGCCTGACCACTCTTGGCCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR GCA 90 bp TGCCCTCAAAAACTCAGCCTTCAAGGGATCCAGCCCACACACGCCACAGGCAGCGGTGGCCACCACTCATaGTACCAGCTGCAGCAATGC +
Preference number: 4 (lower is better)
Translates to: CPQKLSLQGIQPTHATGSGGHHS*YQLQQC
Trigger: GCATTGCTGCAGCTGGTAGCATGAGTGGTGGCCACC...GCTGCCTGTGGCGTGTGTGGGCTGGATCCCTTGAAGGCTGAGTTTTTGAGGGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR GCA 90 bp GGAGCTGGGCCTCTGGGCTGTCCAAACCCAAGGGTCACACTTTGCTTTTCCTTTAGCGGCTGCTGCAGCTaGTCAGCAGCAGCTCGATCC +
Preference number: 4 (lower is better)
Translates to: GAGPLGCPNPRVTLCFSFSGCCS*SAAARS
Trigger: GGATCGAGCTGCTGCTGAGCAGCTGCAGCAGCCGCT...AAAGGAAAAGCAAAGTGTGACCCTTGGGTTTGGACAGCCCAGAGGCCCAGCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR GCA 90 bp GAGGGAGGTGATAAGGTGTCATGCGTTCTGCTGAACCCACTGGCTGGTATGAACAGCCCCAGCGGCTGCTaGAGCTGCTCAGCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: EGGDKVSCVLLNPLAGMNSPSGC*SCSAAA
Trigger: AGCTGCTGCTGAGCAGCTGCAGCAGCCGCTGGGGCT...GTTCATACCAGCCAGTGGGTTCAGCAGAACGCATGACACCTTATCACCTCCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR GCA 90 bp AGGCAGCAGCTGGTTGCCTGGCTGGACATGGATTTGCTGCACTGCAGATGTTTTAGCCCCAGCGGCTGCTaGAGCTGCTCAGCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: RQQLVAWLDMDLLHCRCFSPSGC*SCSAAA
Trigger: AGCTGCTGCTGAGCAGCTGCAGCAGCCGCTGGGGCT...AAAACATCTGCAGTGCAGCAAATCCATGTCCAGCCAGGCAACCAGCTGCTGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR GCA 90 bp ACCAAGGCTGCTGTACCCACCTCAGGGACAGAACTCCACACTATAGTGGGAAAGGTCAGCCCCAGCGGCTaGTGCAGCTGCTCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: TKAAVPTSGTELHTIVGKVSPSG*CSCSAA
Trigger: TGCTGCTGAGCAGCTGCAGCAGCCGCTGGGGCTGAC...CTTTCCCACTATAGTGTGGAGTTCTGTCCCTGAGGTGGGTACAGCAGCCTTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR GCA 90 bp CCTGGCTGGACATGGATTTGCTGCACTGCAGATGTTTTCTGCAGACAAGGTCTGCACTCACCCCGGGCCTaGCTGCAGCTGGCCTGGTAC +
Preference number: 4 (lower is better)
Translates to: PGWTWICCTADVFCRQGLHSPRA*LQLAWY
Trigger: GTACCAGGCCAGCTGCAGGCAGGCCCGGGGTGAGTG...CAGACCTTGTCTGCAGAAAACATCTGCAGTGCAGCAAATCCATGTCCAGCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR GCA 90 bp ACCAAGGCTGCTGTACCCACCTCAGGGACAGAACTCCACACTATAGTGGGAAAGGATGCCGAGGGCCCATaGCTGGCTCCTGGGATGGCA +
Preference number: 4 (lower is better)
Translates to: TKAAVPTSGTELHTIVGKDAEGP*LAPGMA
Trigger: TGCCATCCCAGGAGCCAGGCATGGGCCCTCGGCATC...CTTTCCCACTATAGTGTGGAGTTCTGTCCCTGAGGTGGGTACAGCAGCCTTGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR GCA 90 bp CAGATGTTTTCTGCAGACAAGGTCTGGAGCTGGAGCAGGAAACGGCACCCTCTCCAGTCCCCAGCCTTGTaGATAGGGGTGCTGGGCTCC +
Preference number: 4 (lower is better)
Translates to: QMFSADKVWSWSRKRHPLQSPAL*IGVLGS
Trigger: GGAGCCCAGCACCCCTATGCACAAGGCTGGGGACTG...GAGAGGGTGCCGTTTCCTGCTCCAGCTCCAGACCTTGTCTGCAGAAAACATCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR GCA 90 bp ACTGAGGGAAAAAGGTTCCCAGGTGGGGTCCTCTGCCCACTTTGCCACCACATTCTGGGCCAGGCTTCCTaGCATGCCACTGGAACCGCT +
Preference number: 4 (lower is better)
Translates to: TEGKRFPGGVLCPLCHHILGQAS*HATGTA
Trigger: AGCGGTTCCAGTGGCATGGCAGGAAGCCTGGCCCAG...AATGTGGTGGCAAAGTGGGCAGAGGACCCCACCTGGGAACCTTTTTCCCTCAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR GCA 90 bp ACTCAGCCTTCAAGGGATCCAGCCCACACACGCCACAGGCAGCAGCTGGTTGCCTGGGGACCAAGGATATaGCACACTGGGGGTGTAATG +
Preference number: 4 (lower is better)
Translates to: TQPSRDPAHTRHRQQLVAWGPRI*HTGGVM
Trigger: CATTACACCCCCAGTGTGGCATATCCTTGGTCCCCA...GGCAACCAGCTGCTGCCTGTGGCGTGTGTGGGCTGGATCCCTTGAAGGCTGAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR GCA 90 bp GAGGGGCCAAGAGTGGTCAGGCTGCCCTGGGGTGAATGTCACCCTGATGAGGCCGGTGATAAGGTGTCATaGGTTCTGCTGAACCCACTG +
Preference number: 4 (lower is better)
Translates to: EGPRVVRLPWGECHPDEAGDKVS*VLLNPL
Trigger: CAGTGGGTTCAGCAGAACGCATGACACCTTATCACC...GGCCTCATCAGGGTGACATTCACCCCAGGGCAGCCTGACCACTCTTGGCCCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR GCA 90 bp AGGGGCCAAGAGTGGTCAGGCTGCCCTGGGGTGAATGTCACCCTGATGAGGCCCGGTGATAAGGTGTCATaGGTTCTGCTGAACCCACTG +
Preference number: 4 (lower is better)
Translates to: RGQEWSGCPGVNVTLMRPGDKVS*VLLNPL
Trigger: CAGTGGGTTCAGCAGAACGCATGACACCTTATCACC...GGGCCTCATCAGGGTGACATTCACCCCAGGGCAGCCTGACCACTCTTGGCCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR GCA 90 bp GAGGGGCCAAGAGTGGTCAGGCTGCCCTGGGGTGAATGTCACCCTGATGAGGCCCTCAGGGCTCACCTATaGTACTGGTCCTTTTGGCAA +
Preference number: 4 (lower is better)
Translates to: EGPRVVRLPWGECHPDEALRAHL*YWSFWQ
Trigger: TTGCCAAAAGGACCAGTAGCATAGGTGAGCCCTGAG...GGCCTCATCAGGGTGACATTCACCCCAGGGCAGCCTGACCACTCTTGGCCCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR GCA 90 bp TGCCCTCAAAAACTCAGCCTTCAAGGGATCCAGCCCACACACGCCACAGGCAGCCCAGGTGGGGTCCTCTaGCCACTTTGCCACCACATT +
Preference number: 4 (lower is better)
Translates to: CPQKLSLQGIQPTHATGSPGGVL*PLCHHI
Trigger: AATGTGGTGGCAAAGTGGGCAGAGGACCCCACCTGG...GCTGCCTGTGGCGTGTGTGGGCTGGATCCCTTGAAGGCTGAGTTTTTGAGGGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp GAGGGGCCAAGAGTGGTCAGGCTGCCCTGGGGTGAATGTCACCCTGATGAGGCCGATTGTCGTCATCACTaGCATTGCACAGGTACAGCG +
Preference number: 4 (lower is better)
Translates to: EGPRVVRLPWGECHPDEADCRHH*HCTGTA
Trigger: CGCTGTACCTGTGCAATGCCAGTGATGACGACAATC...GGCCTCATCAGGGTGACATTCACCCCAGGGCAGCCTGACCACTCTTGGCCCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000584437.5
CDS-3UTR CCA 90 bp GGAGCTGGGCCTCTGGGCTGTCCAAACCCAAGGGTCACACTTTGCTTTTCCTTTCCAGATCAACACCACTaGCCAGGTCAGCCCCAGCGG +
Preference number: 4 (lower is better)
Translates to: GAGPLGCPNPRVTLCFSFPDQHH*PGQPQR
Trigger: CCGCTGGGGCTGACCTGGCCAGTGGTGTTGATCTGG...AAAGGAAAAGCAAAGTGTGACCCTTGGGTTTGGACAGCCCAGAGGCCCAGCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp CACTGCAGATGTTTTCTGCAGACAAGGTCTGGAGCTGGAGCAGGAAACGGCACCCTCCTGGTGGCCAGCTaGCTGATGGCCCAGGCTGTT +
Preference number: 4 (lower is better)
Translates to: HCRCFLQTRSGAGAGNGTLLVAS*LMAQAV
Trigger: AACAGCCTGGGCCATCAGCCAGCTGGCCACCAGGAG...GGTGCCGTTTCCTGCTCCAGCTCCAGACCTTGTCTGCAGAAAACATCTGCAGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp AGGCAGCAGCTGGTTGCCTGGCTGGACATGGATTTGCTGCACTGCAGATGTTTTTGCCTGCAGCTGGCCTaGTACCTCCTGGTGGCCAGC +
Preference number: 4 (lower is better)
Translates to: RQQLVAWLDMDLLHCRCFCLQLA*YLLVAS
Trigger: GCTGGCCACCAGGAGGTACCAGGCCAGCTGCAGGCA...AAAACATCTGCAGTGCAGCAAATCCATGTCCAGCCAGGCAACCAGCTGCTGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp AAGGTGTCATGCGTTCTGCTGAACCCACTGGCTGGTATGAACATGAGGCTTGGGTGCCTGCAGCTGGCCTaGTACCTCCTGGTGGCCAGC +
Preference number: 4 (lower is better)
Translates to: KVSCVLLNPLAGMNMRLGCLQLA*YLLVAS
Trigger: GCTGGCCACCAGGAGGTACCAGGCCAGCTGCAGGCA...CCCAAGCCTCATGTTCATACCAGCCAGTGGGTTCAGCAGAACGCATGACACCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp TGCCCTCAAAAACTCAGCCTTCAAGGGATCCAGCCCACACACGCCACAGGCAGCACTCCTCCAGACAGATaGCACACACAGGGGCTGAGC +
Preference number: 4 (lower is better)
Translates to: CPQKLSLQGIQPTHATGSTPPDR*HTQGLS
Trigger: GCTCAGCCCCTGTGTGTGCCATCTGTCTGGAGGAGT...GCTGCCTGTGGCGTGTGTGGGCTGGATCCCTTGAAGGCTGAGTTTTTGAGGGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp GAGGGAGGTGATAAGGTGTCATGCGTTCTGCTGAACCCACTGGCTGGTATGAACGAAGGGACCAGGTCGTaGGGGCCGAGCCACTGCACT +
Preference number: 4 (lower is better)
Translates to: EGGDKVSCVLLNPLAGMNEGTRS*GPSHCT
Trigger: AGTGCAGTGGCTCGGCCCCCACGACCTGGTCCCTTC...GTTCATACCAGCCAGTGGGTTCAGCAGAACGCATGACACCTTATCACCTCCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp AGCAGCTGGTTGCCTGGCTGGACATGGATTTGCTGCACTGCAGATGTTTTCTGCGCCTGGCTCCTGGGATaGCAGGAAGGGACCAGGTCG +
Preference number: 4 (lower is better)
Translates to: SSWLPGWTWICCTADVFCAWLLG*QEGTRS
Trigger: CGACCTGGTCCCTTCCTGCCATCCCAGGAGCCAGGC...GCAGAAAACATCTGCAGTGCAGCAAATCCATGTCCAGCCAGGCAACCAGCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp ACCAAGGCTGCTGTACCCACCTCAGGGACAGAACTCCACACTATAGTGGGAAAGGCCTGGCTCCTGGGATaGCAGGAAGGGACCAGGTCG +
Preference number: 4 (lower is better)
Translates to: TKAAVPTSGTELHTIVGKAWLLG*QEGTRS
Trigger: CGACCTGGTCCCTTCCTGCCATCCCAGGAGCCAGGC...CTTTCCCACTATAGTGTGGAGTTCTGTCCCTGAGGTGGGTACAGCAGCCTTGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp AAAGCTGGTGTTCAGAGCTCACCCAAGGAGGGAGGTGATAAGGTGTCATGCGTTGCGCTGCTGCTCTCCTaGAGCCCGGGGATGTGCAGC +
Preference number: 4 (lower is better)
Translates to: KAGVQSSPKEGGDKVSCVALLLS*SPGMCS
Trigger: GCTGCACATCCCCGGGCTCCAGGAGAGCAGCAGCGC...AACGCATGACACCTTATCACCTCCCTCCTTGGGTGAGCTCTGAACACCAGCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp CTTGTCCACTCAGTGAGGCCAGACTTGTGCTCTAATCCACTCTCCTGTGGGTCCCCTGGGTTTCCCCTGTaGGCACCACCGAGTCCAAGG +
Preference number: 4 (lower is better)
Translates to: LVHSVRPDLCSNPLSCGSPGFPL*APPSPR
Trigger: CCTTGGACTCGGTGGTGCCCACAGGGGAAACCCAGG...GGACCCACAGGAGAGTGGATTAGAGCACAAGTCTGGCCTCACTGAGTGGACAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp CAGATGTTTTCTGCAGACAAGGTCTGGAGCTGGAGCAGGAAACGGCACCCTCTCCCTGGGTTTCCCCTGTaGGCACCACCGAGTCCAAGG +
Preference number: 4 (lower is better)
Translates to: QMFSADKVWSWSRKRHPLPGFPL*APPSPR
Trigger: CCTTGGACTCGGTGGTGCCCACAGGGGAAACCCAGG...GAGAGGGTGCCGTTTCCTGCTCCAGCTCCAGACCTTGTCTGCAGAAAACATCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp GGAGCTGGGCCTCTGGGCTGTCCAAACCCAAGGGTCACACTTTGCTTTTCCTTTCCTGGGTTTCCCCTGTaGGCACCACCGAGTCCAAGG +
Preference number: 4 (lower is better)
Translates to: GAGPLGCPNPRVTLCFSFPGFPL*APPSPR
Trigger: CCTTGGACTCGGTGGTGCCCACAGGGGAAACCCAGG...AAAGGAAAAGCAAAGTGTGACCCTTGGGTTTGGACAGCCCAGAGGCCCAGCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp TGCCCTCAAAAACTCAGCCTTCAAGGGATCCAGCCCACACACGCCACAGGCAGCCTGATCAGGAGAAGGTaGCTCTGGCTGGGGCTGTGT +
Preference number: 4 (lower is better)
Translates to: CPQKLSLQGIQPTHATGSLIRRR*LWLGLC
Trigger: ACACAGCCCCAGCCAGAGCCACCTTCTCCTGATCAG...GCTGCCTGTGGCGTGTGTGGGCTGGATCCCTTGAAGGCTGAGTTTTTGAGGGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp GGTGATAAGGTGTCATGCGTTCTGCTGAACCCACTGGCTGGTATGAACATGAGGGGCCCTGGGGCACTGTaGGTTAGAGAGCCGCCCCGA +
Preference number: 4 (lower is better)
Translates to: GDKVSCVLLNPLAGMNMRGPGAL*VREPPR
Trigger: TCGGGGCGGCTCTCTAACCCACAGTGCCCCAGGGCC...CCTCATGTTCATACCAGCCAGTGGGTTCAGCAGAACGCATGACACCTTATCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp GAGGGAGGTGATAAGGTGTCATGCGTTCTGCTGAACCCACTGGCTGGTATGAACGGGGAGCTGGGCCTCTaGGCTGTCCAAACCCAAGGG +
Preference number: 4 (lower is better)
Translates to: EGGDKVSCVLLNPLAGMNGELGL*AVQTQG
Trigger: CCCTTGGGTTTGGACAGCCCAGAGGCCCAGCTCCCC...GTTCATACCAGCCAGTGGGTTCAGCAGAACGCATGACACCTTATCACCTCCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp ACCAAGGCTGCTGTACCCACCTCAGGGACAGAACTCCACACTATAGTGGGAAAGGGGGAGCTGGGCCTCTaGGCTGTCCAAACCCAAGGG +
Preference number: 4 (lower is better)
Translates to: TKAAVPTSGTELHTIVGKGELGL*AVQTQG
Trigger: CCCTTGGGTTTGGACAGCCCAGAGGCCCAGCTCCCC...CTTTCCCACTATAGTGTGGAGTTCTGTCCCTGAGGTGGGTACAGCAGCCTTGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR TCA 90 bp GAGGGGCCAAGAGTGGTCAGGCTGCCCTGGGGTGAATGTCACCCTGATGAGGCCAAATTTACTCCGGGATaGGAGATGCTGTCCCCTAGA +
Preference number: 4 (lower is better)
Translates to: EGPRVVRLPWGECHPDEAKFTPG*EMLSPR
Trigger: TCTAGGGGACAGCATCTCTCATCCCGGAGTAAATTT...GGCCTCATCAGGGTGACATTCACCCCAGGGCAGCCTGACCACTCTTGGCCCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000584437.5
CDS-3UTR TCA 90 bp GGAGCTGGGCCTCTGGGCTGTCCAAACCCAAGGGTCACACTTTGCTTTTCCTTTCATGGAGGCAGGAAATaGCCCGTAGCTCCTGCCCCT +
Preference number: 4 (lower is better)
Translates to: GAGPLGCPNPRVTLCFSFHGGRK*PVAPAP
Trigger: AGGGGCAGGAGCTACGGGTCATTTCCTGCCTCCATG...AAAGGAAAAGCAAAGTGTGACCCTTGGGTTTGGACAGCCCAGAGGCCCAGCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR TCA 90 bp GAGCAGCACCTTTGTAACACCTGGCTACCCATAGCTAGCTTTCTGCCCTCAAAAGCTCTGGGGAAGCGGTaGTGCCGAGGGCCCATGCCT +
Preference number: 4 (lower is better)
Translates to: EQHLCNTWLPIASFLPSKALGKR*CRGPMP
Trigger: AGGCATGGGCCCTCGGCATCACCGCTTCCCCAGAGC...TTTTGAGGGCAGAAAGCTAGCTATGGGTAGCCAGGTGTTACAAAGGTGCTGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR TCA 90 bp CCTGGCTGGACATGGATTTGCTGCACTGCAGATGTTTTCTGCAGACAAGGTCTGGCCATGACAGGGCCCTaGGCTGGAGTCACTGGCTGG +
Preference number: 4 (lower is better)
Translates to: PGWTWICCTADVFCRQGLAMTGP*AGVTGW
Trigger: CCAGCCAGTGACTCCAGCTCAGGGCCCTGTCATGGC...CAGACCTTGTCTGCAGAAAACATCTGCAGTGCAGCAAATCCATGTCCAGCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR TCA 90 bp ACTGAGGGAAAAAGGTTCCCAGGTGGGGTCCTCTGCCCACTTTGCCACCACATTTCACTGGAAGAGCCATaGCAGGGCCCTGAGCTGGAG +
Preference number: 4 (lower is better)
Translates to: TEGKRFPGGVLCPLCHHISLEEP*QGPELE
Trigger: CTCCAGCTCAGGGCCCTGTCATGGCTCTTCCAGTGA...AATGTGGTGGCAAAGTGGGCAGAGGACCCCACCTGGGAACCTTTTTCCCTCAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR TCA 90 bp GGAGCTGGGCCTCTGGGCTGTCCAAACCCAAGGGTCACACTTTGCTTTTCCTTTTCACTGGAAGAGCCATaGCAGGGCCCTGAGCTGGAG +
Preference number: 4 (lower is better)
Translates to: GAGPLGCPNPRVTLCFSFSLEEP*QGPELE
Trigger: CTCCAGCTCAGGGCCCTGTCATGGCTCTTCCAGTGA...AAAGGAAAAGCAAAGTGTGACCCTTGGGTTTGGACAGCCCAGAGGCCCAGCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR TCA 90 bp CCTGGCTGGACATGGATTTGCTGCACTGCAGATGTTTTCTGCAGACAAGGTCTGCTCGAGTTCCTCCTCTaGGCCAGGCTGGGCCGACAG +
Preference number: 4 (lower is better)
Translates to: PGWTWICCTADVFCRQGLLEFLL*ARLGRQ
Trigger: CTGTCGGCCCAGCCTGGCTCAGAGGAGGAACTCGAG...CAGACCTTGTCTGCAGAAAACATCTGCAGTGCAGCAAATCCATGTCCAGCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR GCA 90 bp ACTCAGCCTTCAAGGGATCCAGCCCACACACGCCACAGGCAGCAGCTGGTTGCCTCCACCTTCTTACTCTaGAACCAAACCAAGTGCCCC +
Preference number: 4 (lower is better)
Translates to: TQPSRDPAHTRHRQQLVASTFLL*NQTKCP
Trigger: GGGGCACTTGGTTTGGTTGCAGAGTAAGAAGGTGGA...GGCAACCAGCTGCTGCCTGTGGCGTGTGTGGGCTGGATCCCTTGAAGGCTGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000584437.5
CDS-3UTR GCA 90 bp AGGGGCCAAGAGTGGTCAGGCTGCCCTGGGGTGAATGTCACCCTGATGAGGCCCACTCATGCTACCAGCTaGAGCAATGCACTTCAACCA +
Preference number: 4 (lower is better)
Translates to: RGQEWSGCPGVNVTLMRPTHATS*SNALQP
Trigger: TGGTTGAAGTGCATTGCTGCAGCTGGTAGCATGAGT...GGGCCTCATCAGGGTGACATTCACCCCAGGGCAGCCTGACCACTCTTGGCCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR GCA 90 bp CAGATGTTTTCTGCAGACAAGGTCTGGAGCTGGAGCAGGAAACGGCACCCTCTCCGTCCAAAGCCTGCCTaGAGGGTAGCCATCAGCAGC +
Preference number: 4 (lower is better)
Translates to: QMFSADKVWSWSRKRHPLRPKPA*RVAISS
Trigger: GCTGCTGATGGCTACCCTGCAGGCAGGCTTTGGACG...GAGAGGGTGCCGTTTCCTGCTCCAGCTCCAGACCTTGTCTGCAGAAAACATCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR GCA 90 bp AAAGCTGGTGTTCAGAGCTCACCCAAGGAGGGAGGTGATAAGGTGTCATGCGTTAGCCCCAGCGGCTGCTaGAGCTGCTCAGCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: KAGVQSSPKEGGDKVSCVSPSGC*SCSAAA
Trigger: AGCTGCTGCTGAGCAGCTGCAGCAGCCGCTGGGGCT...AACGCATGACACCTTATCACCTCCCTCCTTGGGTGAGCTCTGAACACCAGCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR GCA 90 bp AAACTTTTCCCAGAGAAGAACTCTTTGTTGTCCCCGCTCAGCTGTAATTCTGCCGAAGCGGATCCGGCCTaGTGTGGCGGGGGCGGCACC +
Preference number: 4 (lower is better)
Translates to: KLFPEKNSLLSPLSCNSAEADPA*CGGGGT
Trigger: GGTGCCGCCCCCGCCACAGCAGGCCGGATCCGCTTC...GGCAGAATTACAGCTGAGCGGGGACAACAAAGAGTTCTTCTCTGGGAAAAGTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR GCA 90 bp TGGCTGGACATGGATTTGCTGCACTGCAGATGTTTTCTGCAGACAAGGTCTGGACACTCACCCCGGGCCTaGCTGCAGCTGGCCTGGTAC +
Preference number: 4 (lower is better)
Translates to: WLDMDLLHCRCFLQTRSGHSPRA*LQLAWY
Trigger: GTACCAGGCCAGCTGCAGGCAGGCCCGGGGTGAGTG...TCCAGACCTTGTCTGCAGAAAACATCTGCAGTGCAGCAAATCCATGTCCAGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR GCA 90 bp AGGCAGCAGCTGGTTGCCTGGCTGGACATGGATTTGCTGCACTGCAGATGTTTTGGGCTGAGCTGCAGCTaGTCCCTGAGTCTGGCCACT +
Preference number: 4 (lower is better)
Translates to: RQQLVAWLDMDLLHCRCFGLSCS*SLSLAT
Trigger: AGTGGCCAGACTCAGGGAGCAGCTGCAGCTCAGCCC...AAAACATCTGCAGTGCAGCAAATCCATGTCCAGCCAGGCAACCAGCTGCTGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR GCA 90 bp CAGATGTTTTCTGCAGACAAGGTCTGGAGCTGGAGCAGGAAACGGCACCCTCTCTGGGCATGGCCGGGATaGTGGCGAATGAGGTGGAGT +
Preference number: 4 (lower is better)
Translates to: QMFSADKVWSWSRKRHPLWAWPG*WRMRWS
Trigger: ACTCCACCTCATTCGCCAGCATCCCGGCCATGCCCA...GAGAGGGTGCCGTTTCCTGCTCCAGCTCCAGACCTTGTCTGCAGAAAACATCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR GCA 90 bp TCCTTCCTCTGCCCAGATAAAGTCCAGCAGAAATTCCTCCTTTCTACCTCTCTGCCTGCCAGGCGCTGCTaGTCTCCTGGAGCCCGGGGA +
Preference number: 4 (lower is better)
Translates to: SFLCPDKVQQKFLLSTSLPARRC*SPGARG
Trigger: TCCCCGGGCTCCAGGAGAGCAGCAGCGCCTGGCAGG...CAGAGAGGTAGAAAGGAGGAATTTCTGCTGGACTTTATCTGGGCAGAGGAAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR GCA 90 bp GAGGGGCCAAGAGTGGTCAGGCTGCCCTGGGGTGAATGTCACCCTGATGAGGCCACCCACTGCGTTCTGTaGAATAGCTTTCTCCAGATC +
Preference number: 4 (lower is better)
Translates to: EGPRVVRLPWGECHPDEATHCVL*NSFLQI
Trigger: GATCTGGAGAAAGCTATTGCACAGAACGCAGTGGGT...GGCCTCATCAGGGTGACATTCACCCCAGGGCAGCCTGACCACTCTTGGCCCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR GCA 90 bp TGCCCTCAAAAACTCAGCCTTCAAGGGATCCAGCCCACACACGCCACAGGCAGCCAGGCAGCAGCTGGTTaGCTGGCTGGACATGGATTT +
Preference number: 4 (lower is better)
Translates to: CPQKLSLQGIQPTHATGSQAAAG*LAGHGF
Trigger: AAATCCATGTCCAGCCAGGCAACCAGCTGCTGCCTG...GCTGCCTGTGGCGTGTGTGGGCTGGATCCCTTGAAGGCTGAGTTTTTGAGGGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR GCA 90 bp ACTCAGCCTTCAAGGGATCCAGCCCACACACGCCACAGGCAGCAGCTGGTTGCCCTCAGGGCTCACCTATaGTACTGGTCCTTTTGGCAA +
Preference number: 4 (lower is better)
Translates to: TQPSRDPAHTRHRQQLVALRAHL*YWSFWQ
Trigger: TTGCCAAAAGGACCAGTAGCATAGGTGAGCCCTGAG...GGCAACCAGCTGCTGCCTGTGGCGTGTGTGGGCTGGATCCCTTGAAGGCTGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR GCA 90 bp AGGGGCCAAGAGTGGTCAGGCTGCCCTGGGGTGAATGTCACCCTGATGAGGCCCCCAAGGGTCACACTTTaGTTTTCCTTTGTTGTCCCC +
Preference number: 4 (lower is better)
Translates to: RGQEWSGCPGVNVTLMRPPRVTL*FSFVVP
Trigger: GGGGACAACAAAGGAAAAGCAAAGTGTGACCCTTGG...GGGCCTCATCAGGGTGACATTCACCCCAGGGCAGCCTGACCACTCTTGGCCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp CACTGCAGATGTTTTCTGCAGACAAGGTCTGGAGCTGGAGCAGGAAACGGCACCGCAGCCAGCTGCAGCTaGTGGCCACCACTCATGCTA +
Preference number: 4 (lower is better)
Translates to: HCRCFLQTRSGAGAGNGTAASCS*WPPLML
Trigger: TAGCATGAGTGGTGGCCACCAGCTGCAGCTGGCTGC...GGTGCCGTTTCCTGCTCCAGCTCCAGACCTTGTCTGCAGAAAACATCTGCAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp AGCAGCTGGTTGCCTGGCTGGACATGGATTTGCTGCACTGCAGATGTTTTCTGCCCAGATCAACACCACTaGCCAGGTCAGCCCCAGCGG +
Preference number: 4 (lower is better)
Translates to: SSWLPGWTWICCTADVFCPDQHH*PGQPQR
Trigger: CCGCTGGGGCTGACCTGGCCAGTGGTGTTGATCTGG...GCAGAAAACATCTGCAGTGCAGCAAATCCATGTCCAGCCAGGCAACCAGCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp AGTCCTCTTCCAGTGCTTCTAGGAAGTACGGCAAAAAGAATGGTGTTTGCTGTGGGATCCGGCCTGCTGTaGCGGGGGCGGCACCGGATG +
Preference number: 4 (lower is better)
Translates to: SPLPVLLGSTAKRMVFAVGSGLL*RGRHRM
Trigger: CATCCGGTGCCGCCCCCGCCACAGCAGGCCGGATCC...CACAGCAAACACCATTCTTTTTGCCGTACTTCCTAGAAGCACTGGAAGAGGACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp AGCAGCTGGTTGCCTGGCTGGACATGGATTTGCTGCACTGCAGATGTTTTCTGCCTCCTGGTGGCCAGCTaGCTGATGGCCCAGGCTGTT +
Preference number: 4 (lower is better)
Translates to: SSWLPGWTWICCTADVFCLLVAS*LMAQAV
Trigger: AACAGCCTGGGCCATCAGCCAGCTGGCCACCAGGAG...GCAGAAAACATCTGCAGTGCAGCAAATCCATGTCCAGCCAGGCAACCAGCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp ACCAAGGCTGCTGTACCCACCTCAGGGACAGAACTCCACACTATAGTGGGAAAGGCTGGAGTCACTGGCTaGCCCATCTGCCAGGTACCC +
Preference number: 4 (lower is better)
Translates to: TKAAVPTSGTELHTIVGKAGVTG*PICQVP
Trigger: GGGTACCTGGCAGATGGGCCAGCCAGTGACTCCAGC...CTTTCCCACTATAGTGTGGAGTTCTGTCCCTGAGGTGGGTACAGCAGCCTTGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp CTTGTCCACTCAGTGAGGCCAGACTTGTGCTCTAATCCACTCTCCTGTGGGTCCCTGAGCTGGAGTCACTaGCTGGCCCATCTGCCAGGT +
Preference number: 4 (lower is better)
Translates to: LVHSVRPDLCSNPLSCGSLSWSH*LAHLPG
Trigger: ACCTGGCAGATGGGCCAGCCAGTGACTCCAGCTCAG...GGACCCACAGGAGAGTGGATTAGAGCACAAGTCTGGCCTCACTGAGTGGACAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp CAGATGTTTTCTGCAGACAAGGTCTGGAGCTGGAGCAGGAAACGGCACCCTCTCCTGAGCTGGAGTCACTaGCTGGCCCATCTGCCAGGT +
Preference number: 4 (lower is better)
Translates to: QMFSADKVWSWSRKRHPLLSWSH*LAHLPG
Trigger: ACCTGGCAGATGGGCCAGCCAGTGACTCCAGCTCAG...GAGAGGGTGCCGTTTCCTGCTCCAGCTCCAGACCTTGTCTGCAGAAAACATCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp AAGGTGTCATGCGTTCTGCTGAACCCACTGGCTGGTATGAACATGAGGCTTGGGCCTGGGTTTCCCCTGTaGGCACCACCGAGTCCAAGG +
Preference number: 4 (lower is better)
Translates to: KVSCVLLNPLAGMNMRLGPGFPL*APPSPR
Trigger: CCTTGGACTCGGTGGTGCCCACAGGGGAAACCCAGG...CCCAAGCCTCATGTTCATACCAGCCAGTGGGTTCAGCAGAACGCATGACACCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp AAGGTGTCATGCGTTCTGCTGAACCCACTGGCTGGTATGAACATGAGGCTTGGGGGGGACTCCGGTTTCTaGGCCAGGCTTCCTGCCATG +
Preference number: 4 (lower is better)
Translates to: KVSCVLLNPLAGMNMRLGGDSGF*ARLPAM
Trigger: CATGGCAGGAAGCCTGGCCCAGAAACCGGAGTCCCC...CCCAAGCCTCATGTTCATACCAGCCAGTGGGTTCAGCAGAACGCATGACACCTT
58% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp ACCAAGGCTGCTGTACCCACCTCAGGGACAGAACTCCACACTATAGTGGGAAAGGGGGACTCCGGTTTCTaGGCCAGGCTTCCTGCCATG +
Preference number: 4 (lower is better)
Translates to: TKAAVPTSGTELHTIVGKGDSGF*ARLPAM
Trigger: CATGGCAGGAAGCCTGGCCCAGAAACCGGAGTCCCC...CTTTCCCACTATAGTGTGGAGTTCTGTCCCTGAGGTGGGTACAGCAGCCTTGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp CTTGTCCACTCAGTGAGGCCAGACTTGTGCTCTAATCCACTCTCCTGTGGGTCCATAGGAGGCCTGGACTaGGGGACTCCGGTTTCTGGG +
Preference number: 4 (lower is better)
Translates to: LVHSVRPDLCSNPLSCGSIGGLD*GTPVSG
Trigger: CCCAGAAACCGGAGTCCCCCAGTCCAGGCCTCCTAT...GGACCCACAGGAGAGTGGATTAGAGCACAAGTCTGGCCTCACTGAGTGGACAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp CACTGCAGATGTTTTCTGCAGACAAGGTCTGGAGCTGGAGCAGGAAACGGCACCTACTGGGGCAGATGCTaGAGGCGTCAACTGGGCCAG +
Preference number: 4 (lower is better)
Translates to: HCRCFLQTRSGAGAGNGTYWGRC*RRQLGQ
Trigger: CTGGCCCAGTTGACGCCTCCAGCATCTGCCCCAGTA...GGTGCCGTTTCCTGCTCCAGCTCCAGACCTTGTCTGCAGAAAACATCTGCAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp CAGATGTTTTCTGCAGACAAGGTCTGGAGCTGGAGCAGGAAACGGCACCCTCTCTACTGGGGCAGATGCTaGAGGCGTCAACTGGGCCAG +
Preference number: 4 (lower is better)
Translates to: QMFSADKVWSWSRKRHPLYWGRC*RRQLGQ
Trigger: CTGGCCCAGTTGACGCCTCCAGCATCTGCCCCAGTA...GAGAGGGTGCCGTTTCCTGCTCCAGCTCCAGACCTTGTCTGCAGAAAACATCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp ACTGAGGGAAAAAGGTTCCCAGGTGGGGTCCTCTGCCCACTTTGCCACCACATTTACTGGGGCAGATGCTaGAGGCGTCAACTGGGCCAG +
Preference number: 4 (lower is better)
Translates to: TEGKRFPGGVLCPLCHHIYWGRC*RRQLGQ
Trigger: CTGGCCCAGTTGACGCCTCCAGCATCTGCCCCAGTA...AATGTGGTGGCAAAGTGGGCAGAGGACCCCACCTGGGAACCTTTTTCCCTCAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp CACTGCAGATGTTTTCTGCAGACAAGGTCTGGAGCTGGAGCAGGAAACGGCACCCCGCCTTTTCCTCTGTaGGTGTCGGGCAGAGAGGCT +
Preference number: 4 (lower is better)
Translates to: HCRCFLQTRSGAGAGNGTPPFPL*VSGREA
Trigger: AGCCTCTCTGCCCGACACCCACAGAGGAAAAGGCGG...GGTGCCGTTTCCTGCTCCAGCTCCAGACCTTGTCTGCAGAAAACATCTGCAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp ACTGAGGGAAAAAGGTTCCCAGGTGGGGTCCTCTGCCCACTTTGCCACCACATTTGTGGTTCCAGGGGCTaGCGAGGAGTCAGGCACAAC +
Preference number: 4 (lower is better)
Translates to: TEGKRFPGGVLCPLCHHICGSRG*RGVRHN
Trigger: GTTGTGCCTGACTCCTCGCCAGCCCCTGGAACCACA...AATGTGGTGGCAAAGTGGGCAGAGGACCCCACCTGGGAACCTTTTTCCCTCAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp AAGGTGTCATGCGTTCTGCTGAACCCACTGGCTGGTATGAACATGAGGCTTGGGGTGCGGATAAGGGCATaGCCTGCCCTCTGCGGTGTC +
Preference number: 4 (lower is better)
Translates to: KVSCVLLNPLAGMNMRLGVRIRA*PALCGV
Trigger: GACACCGCAGAGGGCAGGCCATGCCCTTATCCGCAC...CCCAAGCCTCATGTTCATACCAGCCAGTGGGTTCAGCAGAACGCATGACACCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp AAAGCTGGTGTTCAGAGCTCACCCAAGGAGGGAGGTGATAAGGTGTCATGCGTTTCCTCTGAGCCAGGCTaGGCCGACAGCACCTGGCAG +
Preference number: 4 (lower is better)
Translates to: KAGVQSSPKEGGDKVSCVSSEPG*ADSTWQ
Trigger: CTGCCAGGTGCTGTCGGCCCAGCCTGGCTCAGAGGA...AACGCATGACACCTTATCACCTCCCTCCTTGGGTGAGCTCTGAACACCAGCTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp ACTCAGCCTTCAAGGGATCCAGCCCACACACGCCACAGGCAGCAGCTGGTTGCCTTGCCTGGCTGGACATaGATTTGCTGCACTGCAGAT +
Preference number: 4 (lower is better)
Translates to: TQPSRDPAHTRHRQQLVALPGWT*ICCTAD
Trigger: ATCTGCAGTGCAGCAAATCCATGTCCAGCCAGGCAA...GGCAACCAGCTGCTGCCTGTGGCGTGTGTGGGCTGGATCCCTTGAAGGCTGAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp AAAGCTGGTGTTCAGAGCTCACCCAAGGAGGGAGGTGATAAGGTGTCATGCGTTGGGGAGCTGGGCCTCTaGGCTGTCCAAACCCAAGGG +
Preference number: 4 (lower is better)
Translates to: KAGVQSSPKEGGDKVSCVGELGL*AVQTQG
Trigger: CCCTTGGGTTTGGACAGCCCAGAGGCCCAGCTCCCC...AACGCATGACACCTTATCACCTCCCTCCTTGGGTGAGCTCTGAACACCAGCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR TCA 90 bp AAGGTGTCATGCGTTCTGCTGAACCCACTGGCTGGTATGAACATGAGGCTTGGGCATGGAGGCAGGAAATaGCCCGTAGCTCCTGCCCCT +
Preference number: 4 (lower is better)
Translates to: KVSCVLLNPLAGMNMRLGHGGRK*PVAPAP
Trigger: AGGGGCAGGAGCTACGGGTCATTTCCTGCCTCCATG...CCCAAGCCTCATGTTCATACCAGCCAGTGGGTTCAGCAGAACGCATGACACCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR TCA 90 bp AAAAGGTTCCCAGGTGGGGTCCTCTGCCCACTTTGCCACCACATTCACATTCCAAGCAGCAGGGTGCTGTaGGGTGGATTGGAGGTGGCT +
Preference number: 4 (lower is better)
Translates to: KRFPGGVLCPLCHHIHIPSSRVL*GGLEVA
Trigger: AGCCACCTCCAATCCACCTCACAGCACCCTGCTGCT...TGGAATGTGAATGTGGTGGCAAAGTGGGCAGAGGACCCCACCTGGGAACCTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR TCA 90 bp AAGGTGTCATGCGTTCTGCTGAACCCACTGGCTGGTATGAACATGAGGCTTGGGAGCAGCAGGGTGCTGTaGGGTGGATTGGAGGTGGCT +
Preference number: 4 (lower is better)
Translates to: KVSCVLLNPLAGMNMRLGSSRVL*GGLEVA
Trigger: AGCCACCTCCAATCCACCTCACAGCACCCTGCTGCT...CCCAAGCCTCATGTTCATACCAGCCAGTGGGTTCAGCAGAACGCATGACACCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR TCA 90 bp GAGGGAGGTGATAAGGTGTCATGCGTTCTGCTGAACCCACTGGCTGGTATGAACCCCCGAAGGGGCTGCTaGGTTGGATCTGGTGACTTG +
Preference number: 4 (lower is better)
Translates to: EGGDKVSCVLLNPLAGMNPRRGC*VGSGDL
Trigger: CAAGTCACCAGATCCAACTCAGCAGCCCCTTCGGGG...GTTCATACCAGCCAGTGGGTTCAGCAGAACGCATGACACCTTATCACCTCCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR TCA 90 bp AGGGGCCAAGAGTGGTCAGGCTGCCCTGGGGTGAATGTCACCCTGATGAGGCCCTGGATTTTTGCAAGTTaGACAGACTGCTGGTACTGG +
Preference number: 4 (lower is better)
Translates to: RGQEWSGCPGVNVTLMRPWIFAS*TDCWYW
Trigger: CCAGTACCAGCAGTCTGTTCAACTTGCAAAAATCCA...GGGCCTCATCAGGGTGACATTCACCCCAGGGCAGCCTGACCACTCTTGGCCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR TCA 90 bp TGGCTGGACATGGATTTGCTGCACTGCAGATGTTTTCTGCAGACAAGGTCTGGACTCGAGTTCCTCCTCTaGGCCAGGCTGGGCCGACAG +
Preference number: 4 (lower is better)
Translates to: WLDMDLLHCRCFLQTRSGLEFLL*ARLGRQ
Trigger: CTGTCGGCCCAGCCTGGCTCAGAGGAGGAACTCGAG...TCCAGACCTTGTCTGCAGAAAACATCTGCAGTGCAGCAAATCCATGTCCAGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR TCA 90 bp TGCCCTCAAAAACTCAGCCTTCAAGGGATCCAGCCCACACACGCCACAGGCAGCCTCTTGTCCACTCAGTaGGGCCAGACTTGTGCTCTA +
Preference number: 4 (lower is better)
Translates to: CPQKLSLQGIQPTHATGSLLSTQ*GQTCAL
Trigger: TAGAGCACAAGTCTGGCCTCACTGAGTGGACAAGAG...GCTGCCTGTGGCGTGTGTGGGCTGGATCCCTTGAAGGCTGAGTTTTTGAGGGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR GCA 90 bp CACTGCAGATGTTTTCTGCAGACAAGGTCTGGAGCTGGAGCAGGAAACGGCACCGGTGGCCACCACTCATaGTACCAGCTGCAGCAATGC +
Preference number: 4 (lower is better)
Translates to: HCRCFLQTRSGAGAGNGTGGHHS*YQLQQC
Trigger: GCATTGCTGCAGCTGGTAGCATGAGTGGTGGCCACC...GGTGCCGTTTCCTGCTCCAGCTCCAGACCTTGTCTGCAGAAAACATCTGCAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR GCA 90 bp AGCAGCTGGTTGCCTGGCTGGACATGGATTTGCTGCACTGCAGATGTTTTCTGCCGTCCAAAGCCTGCCTaGAGGGTAGCCATCAGCAGC +
Preference number: 4 (lower is better)
Translates to: SSWLPGWTWICCTADVFCRPKPA*RVAISS
Trigger: GCTGCTGATGGCTACCCTGCAGGCAGGCTTTGGACG...GCAGAAAACATCTGCAGTGCAGCAAATCCATGTCCAGCCAGGCAACCAGCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR GCA 90 bp CTTGTCCACTCAGTGAGGCCAGACTTGTGCTCTAATCCACTCTCCTGTGGGTCCCCAGTACCAGTCCTGTaGGTCCAAAGCCTGCCTGCA +
Preference number: 4 (lower is better)
Translates to: LVHSVRPDLCSNPLSCGSPVPVL*VQSLPA
Trigger: TGCAGGCAGGCTTTGGACGCACAGGACTGGTACTGG...GGACCCACAGGAGAGTGGATTAGAGCACAAGTCTGGCCTCACTGAGTGGACAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR GCA 90 bp AAGGTGTCATGCGTTCTGCTGAACCCACTGGCTGGTATGAACATGAGGCTTGGGAGACTCCACCGCTGCTaGCAGTACCAGTCCTGTGCG +
Preference number: 4 (lower is better)
Translates to: KVSCVLLNPLAGMNMRLGRLHRC*QYQSCA
Trigger: CGCACAGGACTGGTACTGGCAGCAGCGGTGGAGTCT...CCCAAGCCTCATGTTCATACCAGCCAGTGGGTTCAGCAGAACGCATGACACCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR GCA 90 bp TGGCTGGACATGGATTTGCTGCACTGCAGATGTTTTCTGCAGACAAGGTCTGGAGTCAGCCCCAGCGGCTaGTGCAGCTGCTCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: WLDMDLLHCRCFLQTRSGVSPSG*CSCSAA
Trigger: TGCTGCTGAGCAGCTGCAGCAGCCGCTGGGGCTGAC...TCCAGACCTTGTCTGCAGAAAACATCTGCAGTGCAGCAAATCCATGTCCAGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR GCA 90 bp GGAGCTGGGCCTCTGGGCTGTCCAAACCCAAGGGTCACACTTTGCTTTTCCTTTATGACCCGTAGCTCCTaGCCCTCAGAGAACTCCTCC +
Preference number: 4 (lower is better)
Translates to: GAGPLGCPNPRVTLCFSFMTRSS*PSENSS
Trigger: GGAGGAGTTCTCTGAGGGGCAGGAGCTACGGGTCAT...AAAGGAAAAGCAAAGTGTGACCCTTGGGTTTGGACAGCCCAGAGGCCCAGCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR GCA 90 bp GAGCAGCACCTTTGTAACACCTGGCTACCCATAGCTAGCTTTCTGCCCTCAAAAGATGCCGAGGGCCCATaGCTGGCTCCTGGGATGGCA +
Preference number: 4 (lower is better)
Translates to: EQHLCNTWLPIASFLPSKDAEGP*LAPGMA
Trigger: TGCCATCCCAGGAGCCAGGCATGGGCCCTCGGCATC...TTTTGAGGGCAGAAAGCTAGCTATGGGTAGCCAGGTGTTACAAAGGTGCTGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR GCA 90 bp AAACTTTTCCCAGAGAAGAACTCTTTGTTGTCCCCGCTCAGCTGTAATTCTGCCCCTGCCAGGCGCTGCTaGTCTCCTGGAGCCCGGGGA +
Preference number: 4 (lower is better)
Translates to: KLFPEKNSLLSPLSCNSAPARRC*SPGARG
Trigger: TCCCCGGGCTCCAGGAGAGCAGCAGCGCCTGGCAGG...GGCAGAATTACAGCTGAGCGGGGACAACAAAGAGTTCTTCTCTGGGAAAAGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR GCA 90 bp AGGCAGCAGCTGGTTGCCTGGCTGGACATGGATTTGCTGCACTGCAGATGTTTTTTTCTCCAGATCCACTaGTGTCAGGGGGCCTGGCCC +
Preference number: 4 (lower is better)
Translates to: RQQLVAWLDMDLLHCRCFFLQIH*CQGAWP
Trigger: GGGCCAGGCCCCCTGACAGCAGTGGATCTGGAGAAA...AAAACATCTGCAGTGCAGCAAATCCATGTCCAGCCAGGCAACCAGCTGCTGCCT
57% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR GCA 90 bp AGGCAGCAGCTGGTTGCCTGGCTGGACATGGATTTGCTGCACTGCAGATGTTTTACTGGCTGGCCCATCTaGCAGGTACCCACTGCGTTC +
Preference number: 4 (lower is better)
Translates to: RQQLVAWLDMDLLHCRCFTGWPI*QVPTAF
Trigger: GAACGCAGTGGGTACCTGGCAGATGGGCCAGCCAGT...AAAACATCTGCAGTGCAGCAAATCCATGTCCAGCCAGGCAACCAGCTGCTGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR GCA 90 bp GAGGGAGGTGATAAGGTGTCATGCGTTCTGCTGAACCCACTGGCTGGTATGAACACTGGCTGGCCCATCTaGCAGGTACCCACTGCGTTC +
Preference number: 4 (lower is better)
Translates to: EGGDKVSCVLLNPLAGMNTGWPI*QVPTAF
Trigger: GAACGCAGTGGGTACCTGGCAGATGGGCCAGCCAGT...GTTCATACCAGCCAGTGGGTTCAGCAGAACGCATGACACCTTATCACCTCCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR GCA 90 bp AAAAGGTTCCCAGGTGGGGTCCTCTGCCCACTTTGCCACCACATTCACATTCCATGGTACTGGGGCAGATaGTGGAGGCGTCAACTGGGC +
Preference number: 4 (lower is better)
Translates to: KRFPGGVLCPLCHHIHIPWYWGR*WRRQLG
Trigger: GCCCAGTTGACGCCTCCAGCATCTGCCCCAGTACCA...TGGAATGTGAATGTGGTGGCAAAGTGGGCAGAGGACCCCACCTGGGAACCTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR GCA 90 bp ACTGAGGGAAAAAGGTTCCCAGGTGGGGTCCTCTGCCCACTTTGCCACCACATTGCATGGCCTGCCCTCTaGGGTGTCAGAACTCCATTC +
Preference number: 4 (lower is better)
Translates to: TEGKRFPGGVLCPLCHHIAWPAL*GVRTPF
Trigger: GAATGGAGTTCTGACACCGCAGAGGGCAGGCCATGC...AATGTGGTGGCAAAGTGGGCAGAGGACCCCACCTGGGAACCTTTTTCCCTCAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR GCA 90 bp GGAGCTGGGCCTCTGGGCTGTCCAAACCCAAGGGTCACACTTTGCTTTTCCTTTGATAAGGGCATGGCCTaGCCTCTGCGGTGTCAGAAC +
Preference number: 4 (lower is better)
Translates to: GAGPLGCPNPRVTLCFSFDKGMA*PLRCQN
Trigger: GTTCTGACACCGCAGAGGGCAGGCCATGCCCTTATC...AAAGGAAAAGCAAAGTGTGACCCTTGGGTTTGGACAGCCCAGAGGCCCAGCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR GCA 90 bp GGAGCTGGGCCTCTGGGCTGTCCAAACCCAAGGGTCACACTTTGCTTTTCCTTTCAAGAGTGGTCAGGCTaGCCTGGGGTGAATGTCACC +
Preference number: 4 (lower is better)
Translates to: GAGPLGCPNPRVTLCFSFQEWSG*PGVNVT
Trigger: GGTGACATTCACCCCAGGGCAGCCTGACCACTCTTG...AAAGGAAAAGCAAAGTGTGACCCTTGGGTTTGGACAGCCCAGAGGCCCAGCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp ACCAAGGCTGCTGTACCCACCTCAGGGACAGAACTCCACACTATAGTGGGAAAGGCCAGCTGCAGCTGGTaGCCACCACTCATGCTACCA +
Preference number: 4 (lower is better)
Translates to: TKAAVPTSGTELHTIVGKASCSW*PPLMLP
Trigger: TGGTAGCATGAGTGGTGGCCACCAGCTGCAGCTGGC...CTTTCCCACTATAGTGTGGAGTTCTGTCCCTGAGGTGGGTACAGCAGCCTTGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp AAGGTGTCATGCGTTCTGCTGAACCCACTGGCTGGTATGAACATGAGGCTTGGGGCCAGCTGCAGCTGGTaGCCACCACTCATGCTACCA +
Preference number: 4 (lower is better)
Translates to: KVSCVLLNPLAGMNMRLGASCSW*PPLMLP
Trigger: TGGTAGCATGAGTGGTGGCCACCAGCTGCAGCTGGC...CCCAAGCCTCATGTTCATACCAGCCAGTGGGTTCAGCAGAACGCATGACACCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp ACCAAGGCTGCTGTACCCACCTCAGGGACAGAACTCCACACTATAGTGGGAAAGGCAGCCAGCTGCAGCTaGTGGCCACCACTCATGCTA +
Preference number: 4 (lower is better)
Translates to: TKAAVPTSGTELHTIVGKAASCS*WPPLML
Trigger: TAGCATGAGTGGTGGCCACCAGCTGCAGCTGGCTGC...CTTTCCCACTATAGTGTGGAGTTCTGTCCCTGAGGTGGGTACAGCAGCCTTGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp GAGGGAGGTGATAAGGTGTCATGCGTTCTGCTGAACCCACTGGCTGGTATGAACCAAAGAGGACAGCACTaGCTCCTCGCTCACCCGCCA +
Preference number: 4 (lower is better)
Translates to: EGGDKVSCVLLNPLAGMNQRGQH*LLAHPP
Trigger: TGGCGGGTGAGCGAGGAGCCAGTGCTGTCCTCTTTG...GTTCATACCAGCCAGTGGGTTCAGCAGAACGCATGACACCTTATCACCTCCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp AGGGGCCAAGAGTGGTCAGGCTGCCCTGGGGTGAATGTCACCCTGATGAGGCCCAGCTCAATCCTCACATaGGCCTTTTGGTTCTTGTAC +
Preference number: 4 (lower is better)
Translates to: RGQEWSGCPGVNVTLMRPSSILT*AFWFLY
Trigger: GTACAAGAACCAAAAGGCCCATGTGAGGATTGAGCT...GGGCCTCATCAGGGTGACATTCACCCCAGGGCAGCCTGACCACTCTTGGCCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp TGCCCTCAAAAACTCAGCCTTCAAGGGATCCAGCCCACACACGCCACAGGCAGCTGCTGGCGAATGAGGTaGAGTCTTCGACCTGGTTCT +
Preference number: 4 (lower is better)
Translates to: CPQKLSLQGIQPTHATGSCWRMR*SLRPGS
Trigger: AGAACCAGGTCGAAGACTCCACCTCATTCGCCAGCA...GCTGCCTGTGGCGTGTGTGGGCTGGATCCCTTGAAGGCTGAGTTTTTGAGGGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp CACTGCAGATGTTTTCTGCAGACAAGGTCTGGAGCTGGAGCAGGAAACGGCACCGCATGGCCGGGATGCTaGCGAATGAGGTGGAGTCTT +
Preference number: 4 (lower is better)
Translates to: HCRCFLQTRSGAGAGNGTAWPGC*RMRWSL
Trigger: AAGACTCCACCTCATTCGCCAGCATCCCGGCCATGC...GGTGCCGTTTCCTGCTCCAGCTCCAGACCTTGTCTGCAGAAAACATCTGCAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp CACTGCAGATGTTTTCTGCAGACAAGGTCTGGAGCTGGAGCAGGAAACGGCACCGAGGTGGATTGGAGGTaGCTCAGTCCCCAGCCTTGT +
Preference number: 4 (lower is better)
Translates to: HCRCFLQTRSGAGAGNGTEVDWR*LSPQPC
Trigger: ACAAGGCTGGGGACTGAGCCACCTCCAATCCACCTC...GGTGCCGTTTCCTGCTCCAGCTCCAGACCTTGTCTGCAGAAAACATCTGCAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp CACTGCAGATGTTTTCTGCAGACAAGGTCTGGAGCTGGAGCAGGAAACGGCACCTGCTGTGAGGTGGATTaGAGGTGGCTCAGTCCCCAG +
Preference number: 4 (lower is better)
Translates to: HCRCFLQTRSGAGAGNGTCCEVD*RWLSPQ
Trigger: CTGGGGACTGAGCCACCTCCAATCCACCTCACAGCA...GGTGCCGTTTCCTGCTCCAGCTCCAGACCTTGTCTGCAGAAAACATCTGCAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp ACTGAGGGAAAAAGGTTCCCAGGTGGGGTCCTCTGCCCACTTTGCCACCACATTCAGGGTGCTGTGAGGTaGATTGGAGGTGGCTCAGTC +
Preference number: 4 (lower is better)
Translates to: TEGKRFPGGVLCPLCHHIQGAVR*IGGGSV
Trigger: GACTGAGCCACCTCCAATCCACCTCACAGCACCCTG...AATGTGGTGGCAAAGTGGGCAGAGGACCCCACCTGGGAACCTTTTTCCCTCAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp GGAGCTGGGCCTCTGGGCTGTCCAAACCCAAGGGTCACACTTTGCTTTTCCTTTCAGGGTGCTGTGAGGTaGATTGGAGGTGGCTCAGTC +
Preference number: 4 (lower is better)
Translates to: GAGPLGCPNPRVTLCFSFQGAVR*IGGGSV
Trigger: GACTGAGCCACCTCCAATCCACCTCACAGCACCCTG...AAAGGAAAAGCAAAGTGTGACCCTTGGGTTTGGACAGCCCAGAGGCCCAGCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp AAAGCTGGTGTTCAGAGCTCACCCAAGGAGGGAGGTGATAAGGTGTCATGCGTTGCTGGAGTCACTGGCTaGCCCATCTGCCAGGTACCC +
Preference number: 4 (lower is better)
Translates to: KAGVQSSPKEGGDKVSCVAGVTG*PICQVP
Trigger: GGGTACCTGGCAGATGGGCCAGCCAGTGACTCCAGC...AACGCATGACACCTTATCACCTCCCTCCTTGGGTGAGCTCTGAACACCAGCTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp GGTGATAAGGTGTCATGCGTTCTGCTGAACCCACTGGCTGGTATGAACATGAGGGCTGGAGTCACTGGCTaGCCCATCTGCCAGGTACCC +
Preference number: 4 (lower is better)
Translates to: GDKVSCVLLNPLAGMNMRAGVTG*PICQVP
Trigger: GGGTACCTGGCAGATGGGCCAGCCAGTGACTCCAGC...CCTCATGTTCATACCAGCCAGTGGGTTCAGCAGAACGCATGACACCTTATCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp CCTGGCTGGACATGGATTTGCTGCACTGCAGATGTTTTCTGCAGACAAGGTCTGGCTGGAGTCACTGGCTaGCCCATCTGCCAGGTACCC +
Preference number: 4 (lower is better)
Translates to: PGWTWICCTADVFCRQGLAGVTG*PICQVP
Trigger: GGGTACCTGGCAGATGGGCCAGCCAGTGACTCCAGC...CAGACCTTGTCTGCAGAAAACATCTGCAGTGCAGCAAATCCATGTCCAGCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp AAGGTGTCATGCGTTCTGCTGAACCCACTGGCTGGTATGAACATGAGGCTTGGGCTGAGCTGGAGTCACTaGCTGGCCCATCTGCCAGGT +
Preference number: 4 (lower is better)
Translates to: KVSCVLLNPLAGMNMRLGLSWSH*LAHLPG
Trigger: ACCTGGCAGATGGGCCAGCCAGTGACTCCAGCTCAG...CCCAAGCCTCATGTTCATACCAGCCAGTGGGTTCAGCAGAACGCATGACACCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp AGCAGCTGGTTGCCTGGCTGGACATGGATTTGCTGCACTGCAGATGTTTTCTGCATAGGAGGCCTGGACTaGGGGACTCCGGTTTCTGGG +
Preference number: 4 (lower is better)
Translates to: SSWLPGWTWICCTADVFCIGGLD*GTPVSG
Trigger: CCCAGAAACCGGAGTCCCCCAGTCCAGGCCTCCTAT...GCAGAAAACATCTGCAGTGCAGCAAATCCATGTCCAGCCAGGCAACCAGCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp AAGGTGTCATGCGTTCTGCTGAACCCACTGGCTGGTATGAACATGAGGCTTGGGTACTGGGGCAGATGCTaGAGGCGTCAACTGGGCCAG +
Preference number: 4 (lower is better)
Translates to: KVSCVLLNPLAGMNMRLGYWGRC*RRQLGQ
Trigger: CTGGCCCAGTTGACGCCTCCAGCATCTGCCCCAGTA...CCCAAGCCTCATGTTCATACCAGCCAGTGGGTTCAGCAGAACGCATGACACCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp ACCAAGGCTGCTGTACCCACCTCAGGGACAGAACTCCACACTATAGTGGGAAAGCCGCCTTTTCCTCTGTaGGTGTCGGGCAGAGAGGCT +
Preference number: 4 (lower is better)
Translates to: TKAAVPTSGTELHTIVGKPPFPL*VSGREA
Trigger: AGCCTCTCTGCCCGACACCCACAGAGGAAAAGGCGG...CTTTCCCACTATAGTGTGGAGTTCTGTCCCTGAGGTGGGTACAGCAGCCTTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp CAGATGTTTTCTGCAGACAAGGTCTGGAGCTGGAGCAGGAAACGGCACCCTCTCCCTCTTGTCCAGGCCTaGAGGTCCACAGATCAAGGG +
Preference number: 4 (lower is better)
Translates to: QMFSADKVWSWSRKRHPLPLVQA*RSTDQG
Trigger: CCCTTGATCTGTGGACCTCCAGGCCTGGACAAGAGG...GAGAGGGTGCCGTTTCCTGCTCCAGCTCCAGACCTTGTCTGCAGAAAACATCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp ACTGAGGGAAAAAGGTTCCCAGGTGGGGTCCTCTGCCCACTTTGCCACCACATTCCTCTTGTCCAGGCCTaGAGGTCCACAGATCAAGGG +
Preference number: 4 (lower is better)
Translates to: TEGKRFPGGVLCPLCHHIPLVQA*RSTDQG
Trigger: CCCTTGATCTGTGGACCTCCAGGCCTGGACAAGAGG...AATGTGGTGGCAAAGTGGGCAGAGGACCCCACCTGGGAACCTTTTTCCCTCAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp AGGCAGCAGCTGGTTGCCTGGCTGGACATGGATTTGCTGCACTGCAGATGTTTTTGTGGTTCCAGGGGCTaGCGAGGAGTCAGGCACAAC +
Preference number: 4 (lower is better)
Translates to: RQQLVAWLDMDLLHCRCFCGSRG*RGVRHN
Trigger: GTTGTGCCTGACTCCTCGCCAGCCCCTGGAACCACA...AAAACATCTGCAGTGCAGCAAATCCATGTCCAGCCAGGCAACCAGCTGCTGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp TGCCCTCAAAAACTCAGCCTTCAAGGGATCCAGCCCACACACGCCACAGGCAGCTCTGGAGCACACTCTTaGTTGGAGCTAGGCCTGAAC +
Preference number: 4 (lower is better)
Translates to: CPQKLSLQGIQPTHATGSSGAHS*LELGLN
Trigger: GTTCAGGCCTAGCTCCAACCAAGAGTGTGCTCCAGA...GCTGCCTGTGGCGTGTGTGGGCTGGATCCCTTGAAGGCTGAGTTTTTGAGGGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp ACTCAGCCTTCAAGGGATCCAGCCCACACACGCCACAGGCAGCAGCTGGTTGCCAAACCAAGTAGGGGTTaGAGAAGGAGCAGCACCTTT +
Preference number: 4 (lower is better)
Translates to: TQPSRDPAHTRHRQQLVAKPSRG*RRSSTF
Trigger: AAAGGTGCTGCTCCTTCTCCAACCCCTACTTGGTTT...GGCAACCAGCTGCTGCCTGTGGCGTGTGTGGGCTGGATCCCTTGAAGGCTGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp GAGCAGCACCTTTGTAACACCTGGCTACCCATAGCTAGCTTTCTGCCCTCAAAAGGGGAGCTGGGCCTCTaGGCTGTCCAAACCCAAGGG +
Preference number: 4 (lower is better)
Translates to: EQHLCNTWLPIASFLPSKGELGL*AVQTQG
Trigger: CCCTTGGGTTTGGACAGCCCAGAGGCCCAGCTCCCC...TTTTGAGGGCAGAAAGCTAGCTATGGGTAGCCAGGTGTTACAAAGGTGCTGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp GGAGCTGGGCCTCTGGGCTGTCCAAACCCAAGGGTCACACTTTGCTTTTCCTTTCTGTATGGCTTATACTaGGGAGCTGGGCCTCTGGGC +
Preference number: 4 (lower is better)
Translates to: GAGPLGCPNPRVTLCFSFLYGLY*GAGPLG
Trigger: GCCCAGAGGCCCAGCTCCCCAGTATAAGCCATACAG...AAAGGAAAAGCAAAGTGTGACCCTTGGGTTTGGACAGCCCAGAGGCCCAGCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp CAGATGTTTTCTGCAGACAAGGTCTGGAGCTGGAGCAGGAAACGGCACCCTCTCGGTCCCTGGCCTGTATaGCTTATACTGGGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: QMFSADKVWSWSRKRHPLGPWPV*LILGSW
Trigger: CCAGCTCCCCAGTATAAGCCATACAGGCCAGGGACC...GAGAGGGTGCCGTTTCCTGCTCCAGCTCCAGACCTTGTCTGCAGAAAACATCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp CACTGCAGATGTTTTCTGCAGACAAGGTCTGGAGCTGGAGCAGGAAACGGCACCGTGGTCAGGCTGCCCTaGGGTGAATGTCACCCTGAT +
Preference number: 4 (lower is better)
Translates to: HCRCFLQTRSGAGAGNGTVVRLP*GECHPD
Trigger: ATCAGGGTGACATTCACCCCAGGGCAGCCTGACCAC...GGTGCCGTTTCCTGCTCCAGCTCCAGACCTTGTCTGCAGAAAACATCTGCAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR TCA 90 bp CTTGTCCACTCAGTGAGGCCAGACTTGTGCTCTAATCCACTCTCCTGTGGGTCCGCACCGAAGCCAGGATaGTCACAAAGATGGTGCCCA +
Preference number: 4 (lower is better)
Translates to: LVHSVRPDLCSNPLSCGSAPKPG*SQRWCP
Trigger: TGGGCACCATCTTTGTGATCATCCTGGCTTCGGTGC...GGACCCACAGGAGAGTGGATTAGAGCACAAGTCTGGCCTCACTGAGTGGACAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR TCA 90 bp CACTGCAGATGTTTTCTGCAGACAAGGTCTGGAGCTGGAGCAGGAAACGGCACCGCACCGAAGCCAGGATaGTCACAAAGATGGTGCCCA +
Preference number: 4 (lower is better)
Translates to: HCRCFLQTRSGAGAGNGTAPKPG*SQRWCP
Trigger: TGGGCACCATCTTTGTGATCATCCTGGCTTCGGTGC...GGTGCCGTTTCCTGCTCCAGCTCCAGACCTTGTCTGCAGAAAACATCTGCAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR TCA 90 bp TGGCTGGACATGGATTTGCTGCACTGCAGATGTTTTCTGCAGACAAGGTCTGGACAGGCTGTTCTCTGCTaGAGCGGATCCGGCCTGCTG +
Preference number: 4 (lower is better)
Translates to: WLDMDLLHCRCFLQTRSGQAVLC*SGSGLL
Trigger: CAGCAGGCCGGATCCGCTTCAGCAGAGAACAGCCTG...TCCAGACCTTGTCTGCAGAAAACATCTGCAGTGCAGCAAATCCATGTCCAGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR TCA 90 bp GGTGATAAGGTGTCATGCGTTCTGCTGAACCCACTGGCTGGTATGAACATGAGGCGGGATGCTGGCGAATaGGGTGGAGTCTTCGACCTG +
Preference number: 4 (lower is better)
Translates to: GDKVSCVLLNPLAGMNMRRDAGE*GGVFDL
Trigger: CAGGTCGAAGACTCCACCTCATTCGCCAGCATCCCG...CCTCATGTTCATACCAGCCAGTGGGTTCAGCAGAACGCATGACACCTTATCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR TCA 90 bp TCCTTCCTCTGCCCAGATAAAGTCCAGCAGAAATTCCTCCTTTCTACCTCTCTGGCCATGACAGGGCCCTaGGCTGGAGTCACTGGCTGG +
Preference number: 4 (lower is better)
Translates to: SFLCPDKVQQKFLLSTSLAMTGP*AGVTGW
Trigger: CCAGCCAGTGACTCCAGCTCAGGGCCCTGTCATGGC...CAGAGAGGTAGAAAGGAGGAATTTCTGCTGGACTTTATCTGGGCAGAGGAAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR TCA 90 bp CCTGGCTGGACATGGATTTGCTGCACTGCAGATGTTTTCTGCAGACAAGGTCTGTCACTGGAAGAGCCATaGCAGGGCCCTGAGCTGGAG +
Preference number: 4 (lower is better)
Translates to: PGWTWICCTADVFCRQGLSLEEP*QGPELE
Trigger: CTCCAGCTCAGGGCCCTGTCATGGCTCTTCCAGTGA...CAGACCTTGTCTGCAGAAAACATCTGCAGTGCAGCAAATCCATGTCCAGCCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR TCA 90 bp TGCCCTCAAAAACTCAGCCTTCAAGGGATCCAGCCCACACACGCCACAGGCAGCCTGAGTTGGATCTGGTaGCTTGCTGATCAGGAGAAG +
Preference number: 4 (lower is better)
Translates to: CPQKLSLQGIQPTHATGSLSWIW*LADQEK
Trigger: CTTCTCCTGATCAGCAAGTCACCAGATCCAACTCAG...GCTGCCTGTGGCGTGTGTGGGCTGGATCCCTTGAAGGCTGAGTTTTTGAGGGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR TCA 90 bp AAGGTGTCATGCGTTCTGCTGAACCCACTGGCTGGTATGAACATGAGGCTTGGGAGCCAGGGTTGCCCCTaGTGTAGCAGCCTTACTGTG +
Preference number: 4 (lower is better)
Translates to: KVSCVLLNPLAGMNMRLGSQGCP*CSSLTV
Trigger: CACAGTAAGGCTGCTACATCAGGGGCAACCCTGGCT...CCCAAGCCTCATGTTCATACCAGCCAGTGGGTTCAGCAGAACGCATGACACCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR GCA 90 bp AGGCAGCAGCTGGTTGCCTGGCTGGACATGGATTTGCTGCACTGCAGATGTTTTGGTGGCCACCACTCATaGTACCAGCTGCAGCAATGC +
Preference number: 4 (lower is better)
Translates to: RQQLVAWLDMDLLHCRCFGGHHS*YQLQQC
Trigger: GCATTGCTGCAGCTGGTAGCATGAGTGGTGGCCACC...AAAACATCTGCAGTGCAGCAAATCCATGTCCAGCCAGGCAACCAGCTGCTGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR GCA 90 bp CCTGGCTGGACATGGATTTGCTGCACTGCAGATGTTTTCTGCAGACAAGGTCTGCGTCCAAAGCCTGCCTaGAGGGTAGCCATCAGCAGC +
Preference number: 4 (lower is better)
Translates to: PGWTWICCTADVFCRQGLRPKPA*RVAISS
Trigger: GCTGCTGATGGCTACCCTGCAGGCAGGCTTTGGACG...CAGACCTTGTCTGCAGAAAACATCTGCAGTGCAGCAAATCCATGTCCAGCCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR GCA 90 bp AGGCAGCAGCTGGTTGCCTGGCTGGACATGGATTTGCTGCACTGCAGATGTTTTTGTGCGTCCAAAGCCTaGCTGCAGGGTAGCCATCAG +
Preference number: 4 (lower is better)
Translates to: RQQLVAWLDMDLLHCRCFCASKA*LQGSHQ
Trigger: CTGATGGCTACCCTGCAGGCAGGCTTTGGACGCACA...AAAACATCTGCAGTGCAGCAAATCCATGTCCAGCCAGGCAACCAGCTGCTGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR GCA 90 bp GGTGATAAGGTGTCATGCGTTCTGCTGAACCCACTGGCTGGTATGAACATGAGGAGACTCCACCGCTGCTaGCAGTACCAGTCCTGTGCG +
Preference number: 4 (lower is better)
Translates to: GDKVSCVLLNPLAGMNMRRLHRC*QYQSCA
Trigger: CGCACAGGACTGGTACTGGCAGCAGCGGTGGAGTCT...CCTCATGTTCATACCAGCCAGTGGGTTCAGCAGAACGCATGACACCTTATCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR GCA 90 bp CACTGCAGATGTTTTCTGCAGACAAGGTCTGGAGCTGGAGCAGGAAACGGCACCTTCAGACTCCACCGCTaGTGCCAGTACCAGTCCTGT +
Preference number: 4 (lower is better)
Translates to: HCRCFLQTRSGAGAGNGTFRLHR*CQYQSC
Trigger: ACAGGACTGGTACTGGCAGCAGCGGTGGAGTCTGAA...GGTGCCGTTTCCTGCTCCAGCTCCAGACCTTGTCTGCAGAAAACATCTGCAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR GCA 90 bp CAGATGTTTTCTGCAGACAAGGTCTGGAGCTGGAGCAGGAAACGGCACCCTCTCTTCAGACTCCACCGCTaGTGCCAGTACCAGTCCTGT +
Preference number: 4 (lower is better)
Translates to: QMFSADKVWSWSRKRHPLFRLHR*CQYQSC
Trigger: ACAGGACTGGTACTGGCAGCAGCGGTGGAGTCTGAA...GAGAGGGTGCCGTTTCCTGCTCCAGCTCCAGACCTTGTCTGCAGAAAACATCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR GCA 90 bp CTTGTCCACTCAGTGAGGCCAGACTTGTGCTCTAATCCACTCTCCTGTGGGTCCTTCAGACTCCACCGCTaGTGCCAGTACCAGTCCTGT +
Preference number: 4 (lower is better)
Translates to: LVHSVRPDLCSNPLSCGSFRLHR*CQYQSC
Trigger: ACAGGACTGGTACTGGCAGCAGCGGTGGAGTCTGAA...GGACCCACAGGAGAGTGGATTAGAGCACAAGTCTGGCCTCACTGAGTGGACAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR GCA 90 bp AAAAGGTTCCCAGGTGGGGTCCTCTGCCCACTTTGCCACCACATTCACATTCCACGTCATCACTGGCATTaGACAGGTACAGCGGGTGGG +
Preference number: 4 (lower is better)
Translates to: KRFPGGVLCPLCHHIHIPRHHWH*TGTAGG
Trigger: CCCACCCGCTGTACCTGTGCAATGCCAGTGATGACG...TGGAATGTGAATGTGGTGGCAAAGTGGGCAGAGGACCCCACCTGGGAACCTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000584437.5
CDS-3UTR GCA 90 bp GAGCAGCACCTTTGTAACACCTGGCTACCCATAGCTAGCTTTCTGCCCTCAAAAAGCGGCTGCTGCAGCTaGTCAGCAGCAGCTCGATCC +
Preference number: 4 (lower is better)
Translates to: EQHLCNTWLPIASFLPSKSGCCS*SAAARS
Trigger: GGATCGAGCTGCTGCTGAGCAGCTGCAGCAGCCGCT...TTTTGAGGGCAGAAAGCTAGCTATGGGTAGCCAGGTGTTACAAAGGTGCTGCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR GCA 90 bp CCTGGCTGGACATGGATTTGCTGCACTGCAGATGTTTTCTGCAGACAAGGTCTGTGGGCATGGCCGGGATaGTGGCGAATGAGGTGGAGT +
Preference number: 4 (lower is better)
Translates to: PGWTWICCTADVFCRQGLWAWPG*WRMRWS
Trigger: ACTCCACCTCATTCGCCAGCATCCCGGCCATGCCCA...CAGACCTTGTCTGCAGAAAACATCTGCAGTGCAGCAAATCCATGTCCAGCCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR GCA 90 bp TCCTTCCTCTGCCCAGATAAAGTCCAGCAGAAATTCCTCCTTTCTACCTCTCTGGATGCCGAGGGCCCATaGCTGGCTCCTGGGATGGCA +
Preference number: 4 (lower is better)
Translates to: SFLCPDKVQQKFLLSTSLDAEGP*LAPGMA
Trigger: TGCCATCCCAGGAGCCAGGCATGGGCCCTCGGCATC...CAGAGAGGTAGAAAGGAGGAATTTCTGCTGGACTTTATCTGGGCAGAGGAAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR GCA 90 bp AGAACTCTTTGTTGTCCCCGCTCAGCTGTAATTCTGCCTTTTCTACCTTCATTCGCTCCTGCCAGGCGCTaGTGCTCTCCTGGAGCCCGG +
Preference number: 4 (lower is better)
Translates to: RTLCCPRSAVILPFLPSFAPARR*CSPGAR
Trigger: CCGGGCTCCAGGAGAGCAGCAGCGCCTGGCAGGAGC...GAATGAAGGTAGAAAAGGCAGAATTACAGCTGAGCGGGGACAACAAAGAGTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR GCA 90 bp GGTGATAAGGTGTCATGCGTTCTGCTGAACCCACTGGCTGGTATGAACATGAGGTTTCTCCAGATCCACTaGTGTCAGGGGGCCTGGCCC +
Preference number: 4 (lower is better)
Translates to: GDKVSCVLLNPLAGMNMRFLQIH*CQGAWP
Trigger: GGGCCAGGCCCCCTGACAGCAGTGGATCTGGAGAAA...CCTCATGTTCATACCAGCCAGTGGGTTCAGCAGAACGCATGACACCTTATCACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR GCA 90 bp AAAGCTGGTGTTCAGAGCTCACCCAAGGAGGGAGGTGATAAGGTGTCATGCGTTTTTCTCCAGATCCACTaGTGTCAGGGGGCCTGGCCC +
Preference number: 4 (lower is better)
Translates to: KAGVQSSPKEGGDKVSCVFLQIH*CQGAWP
Trigger: GGGCCAGGCCCCCTGACAGCAGTGGATCTGGAGAAA...AACGCATGACACCTTATCACCTCCCTCCTTGGGTGAGCTCTGAACACCAGCTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR GCA 90 bp AGCAGCTGGTTGCCTGGCTGGACATGGATTTGCTGCACTGCAGATGTTTTCTGCGCATGGCCTGCCCTCTaGGGTGTCAGAACTCCATTC +
Preference number: 4 (lower is better)
Translates to: SSWLPGWTWICCTADVFCAWPAL*GVRTPF
Trigger: GAATGGAGTTCTGACACCGCAGAGGGCAGGCCATGC...GCAGAAAACATCTGCAGTGCAGCAAATCCATGTCCAGCCAGGCAACCAGCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR GCA 90 bp AGGCAGCAGCTGGTTGCCTGGCTGGACATGGATTTGCTGCACTGCAGATGTTTTAGGAGCAGGACTCTGTaGCAGGTAGGGCCCAAACAC +
Preference number: 4 (lower is better)
Translates to: RQQLVAWLDMDLLHCRCFRSRTL*QVGPKH
Trigger: GTGTTTGGGCCCTACCTGGCACAGAGTCCTGCTCCT...AAAACATCTGCAGTGCAGCAAATCCATGTCCAGCCAGGCAACCAGCTGCTGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR GCA 90 bp TGCCCTCAAAAACTCAGCCTTCAAGGGATCCAGCCCACACACGCCACAGGCAGCCTCAGGGCTCACCTATaGTACTGGTCCTTTTGGCAA +
Preference number: 4 (lower is better)
Translates to: CPQKLSLQGIQPTHATGSLRAHL*YWSFWQ
Trigger: TTGCCAAAAGGACCAGTAGCATAGGTGAGCCCTGAG...GCTGCCTGTGGCGTGTGTGGGCTGGATCCCTTGAAGGCTGAGTTTTTGAGGGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR GCA 90 bp GAGGGAGGTGATAAGGTGTCATGCGTTCTGCTGAACCCACTGGCTGGTATGAACCAAGAGTGGTCAGGCTaGCCTGGGGTGAATGTCACC +
Preference number: 4 (lower is better)
Translates to: EGGDKVSCVLLNPLAGMNQEWSG*PGVNVT
Trigger: GGTGACATTCACCCCAGGGCAGCCTGACCACTCTTG...GTTCATACCAGCCAGTGGGTTCAGCAGAACGCATGACACCTTATCACCTCCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR GCA 90 bp AAGGTGTCATGCGTTCTGCTGAACCCACTGGCTGGTATGAACATGAGGCTTGGGCCAGGTGGGGTCCTCTaGCCACTTTGCCACCACATT +
Preference number: 4 (lower is better)
Translates to: KVSCVLLNPLAGMNMRLGPGGVL*PLCHHI
Trigger: AATGTGGTGGCAAAGTGGGCAGAGGACCCCACCTGG...CCCAAGCCTCATGTTCATACCAGCCAGTGGGTTCAGCAGAACGCATGACACCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp AGGGGCCAAGAGTGGTCAGGCTGCCCTGGGGTGAATGTCACCCTGATGAGGCCCTCTCTGAATCATGGATaGACTTGGAAAGTTCGGAAG +
Preference number: 4 (lower is better)
Translates to: RGQEWSGCPGVNVTLMRPSLNHG*TWKVRK
Trigger: CTTCCGAACTTTCCAAGTCCATCCATGATTCAGAGA...GGGCCTCATCAGGGTGACATTCACCCCAGGGCAGCCTGACCACTCTTGGCCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000584437.5
CDS-3UTR CCA 90 bp CCTGGCTGGACATGGATTTGCTGCACTGCAGATGTTTTCTGCAGACAAGGTCTGGCCAGCTGCAGCTGGTaGCCACCACTCATGCTACCA +
Preference number: 4 (lower is better)
Translates to: PGWTWICCTADVFCRQGLASCSW*PPLMLP
Trigger: TGGTAGCATGAGTGGTGGCCACCAGCTGCAGCTGGC...CAGACCTTGTCTGCAGAAAACATCTGCAGTGCAGCAAATCCATGTCCAGCCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp AAAGCTGGTGTTCAGAGCTCACCCAAGGAGGGAGGTGATAAGGTGTCATGCGTTCAAAGAGGACAGCACTaGCTCCTCGCTCACCCGCCA +
Preference number: 4 (lower is better)
Translates to: KAGVQSSPKEGGDKVSCVQRGQH*LLAHPP
Trigger: TGGCGGGTGAGCGAGGAGCCAGTGCTGTCCTCTTTG...AACGCATGACACCTTATCACCTCCCTCCTTGGGTGAGCTCTGAACACCAGCTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp TGGCTGGACATGGATTTGCTGCACTGCAGATGTTTTCTGCAGACAAGGTCTGGACCAGATCAACACCACTaGCCAGGTCAGCCCCAGCGG +
Preference number: 4 (lower is better)
Translates to: WLDMDLLHCRCFLQTRSGPDQHH*PGQPQR
Trigger: CCGCTGGGGCTGACCTGGCCAGTGGTGTTGATCTGG...TCCAGACCTTGTCTGCAGAAAACATCTGCAGTGCAGCAAATCCATGTCCAGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp GAGCAGCACCTTTGTAACACCTGGCTACCCATAGCTAGCTTTCTGCCCTCAAAACCAGATCAACACCACTaGCCAGGTCAGCCCCAGCGG +
Preference number: 4 (lower is better)
Translates to: EQHLCNTWLPIASFLPSKPDQHH*PGQPQR
Trigger: CCGCTGGGGCTGACCTGGCCAGTGGTGTTGATCTGG...TTTTGAGGGCAGAAAGCTAGCTATGGGTAGCCAGGTGTTACAAAGGTGCTGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp AAGAACTCTTTGTTGTCCCCGCTCAGCTGTAATTCTGCCTTTTCTACCTTCATTGGATCCGGCCTGCTGTaGCGGGGGCGGCACCGGATG +
Preference number: 4 (lower is better)
Translates to: KNSLLSPLSCNSAFSTFIGSGLL*RGRHRM
Trigger: CATCCGGTGCCGCCCCCGCCACAGCAGGCCGGATCC...AATGAAGGTAGAAAAGGCAGAATTACAGCTGAGCGGGGACAACAAAGAGTTCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp AGTCCTCTTCCAGTGCTTCTAGGAAGTACGGCAAAAAGAATGGTGTTTGCTGTGGGGCCTGCCTGCAGCTaGCCTGGTACCTCCTGGTGG +
Preference number: 4 (lower is better)
Translates to: SPLPVLLGSTAKRMVFAVGPACS*PGTSWW
Trigger: CCACCAGGAGGTACCAGGCCAGCTGCAGGCAGGCCC...CACAGCAAACACCATTCTTTTTGCCGTACTTCCTAGAAGCACTGGAAGAGGACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp AAACTTTTCCCAGAGAAGAACTCTTTGTTGTCCCCGCTCAGCTGTAATTCTGCCGGGCCTGCCTGCAGCTaGCCTGGTACCTCCTGGTGG +
Preference number: 4 (lower is better)
Translates to: KLFPEKNSLLSPLSCNSAGPACS*PGTSWW
Trigger: CCACCAGGAGGTACCAGGCCAGCTGCAGGCAGGCCC...GGCAGAATTACAGCTGAGCGGGGACAACAAAGAGTTCTTCTCTGGGAAAAGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp AGCAGCTGGTTGCCTGGCTGGACATGGATTTGCTGCACTGCAGATGTTTTCTGCACTCCTCCAGACAGATaGCACACACAGGGGCTGAGC +
Preference number: 4 (lower is better)
Translates to: SSWLPGWTWICCTADVFCTPPDR*HTQGLS
Trigger: GCTCAGCCCCTGTGTGTGCCATCTGTCTGGAGGAGT...GCAGAAAACATCTGCAGTGCAGCAAATCCATGTCCAGCCAGGCAACCAGCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp TGGCTGGACATGGATTTGCTGCACTGCAGATGTTTTCTGCAGACAAGGTCTGGAGGGGATGTGCAGCTCTaGGGAAGCGGTGATGCCGAG +
Preference number: 4 (lower is better)
Translates to: WLDMDLLHCRCFLQTRSGGDVQL*GSGDAE
Trigger: CTCGGCATCACCGCTTCCCCAGAGCTGCACATCCCC...TCCAGACCTTGTCTGCAGAAAACATCTGCAGTGCAGCAAATCCATGTCCAGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp ACCAAGGCTGCTGTACCCACCTCAGGGACAGAACTCCACACTATAGTGGGAAAGGAGGTGGATTGGAGGTaGCTCAGTCCCCAGCCTTGT +
Preference number: 4 (lower is better)
Translates to: TKAAVPTSGTELHTIVGKEVDWR*LSPQPC
Trigger: ACAAGGCTGGGGACTGAGCCACCTCCAATCCACCTC...CTTTCCCACTATAGTGTGGAGTTCTGTCCCTGAGGTGGGTACAGCAGCCTTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp GAGGGAGGTGATAAGGTGTCATGCGTTCTGCTGAACCCACTGGCTGGTATGAACTGCTGTGAGGTGGATTaGAGGTGGCTCAGTCCCCAG +
Preference number: 4 (lower is better)
Translates to: EGGDKVSCVLLNPLAGMNCCEVD*RWLSPQ
Trigger: CTGGGGACTGAGCCACCTCCAATCCACCTCACAGCA...GTTCATACCAGCCAGTGGGTTCAGCAGAACGCATGACACCTTATCACCTCCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp AAAGCTGGTGTTCAGAGCTCACCCAAGGAGGGAGGTGATAAGGTGTCATGCGTTCTGAGCTGGAGTCACTaGCTGGCCCATCTGCCAGGT +
Preference number: 4 (lower is better)
Translates to: KAGVQSSPKEGGDKVSCVLSWSH*LAHLPG
Trigger: ACCTGGCAGATGGGCCAGCCAGTGACTCCAGCTCAG...AACGCATGACACCTTATCACCTCCCTCCTTGGGTGAGCTCTGAACACCAGCTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp CACTGCAGATGTTTTCTGCAGACAAGGTCTGGAGCTGGAGCAGGAAACGGCACCGTAGAACTGCTGCCATaGACCCCCTGTAGGCTGATG +
Preference number: 4 (lower is better)
Translates to: HCRCFLQTRSGAGAGNGTVELLP*TPCRLM
Trigger: CATCAGCCTACAGGGGGTCCATGGCAGCAGTTCTAC...GGTGCCGTTTCCTGCTCCAGCTCCAGACCTTGTCTGCAGAAAACATCTGCAGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp AAGGTGTCATGCGTTCTGCTGAACCCACTGGCTGGTATGAACATGAGGCTTGGGTGCATGTCCACTCGCTaGGGATCCCCTTTAGGGCTG +
Preference number: 4 (lower is better)
Translates to: KVSCVLLNPLAGMNMRLGCMSTR*GSPLGL
Trigger: CAGCCCTAAAGGGGATCCCCAGCGAGTGGACATGCA...CCCAAGCCTCATGTTCATACCAGCCAGTGGGTTCAGCAGAACGCATGACACCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp AGGCAGCAGCTGGTTGCCTGGCTGGACATGGATTTGCTGCACTGCAGATGTTTTGAAGGTGGCTCTGGCTaGGGCTGTGTCCGAGGAATA +
Preference number: 4 (lower is better)
Translates to: RQQLVAWLDMDLLHCRCFEGGSG*GCVRGI
Trigger: TATTCCTCGGACACAGCCCCAGCCAGAGCCACCTTC...AAAACATCTGCAGTGCAGCAAATCCATGTCCAGCCAGGCAACCAGCTGCTGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp AGGGGCCAAGAGTGGTCAGGCTGCCCTGGGGTGAATGTCACCCTGATGAGGCCCGTACGGCAAAAAGAATaGTGTTTGCTGTGGTCCTTT +
Preference number: 4 (lower is better)
Translates to: RGQEWSGCPGVNVTLMRPVRQKE*CLLWSF
Trigger: AAAGGACCACAGCAAACACCATTCTTTTTGCCGTAC...GGGCCTCATCAGGGTGACATTCACCCCAGGGCAGCCTGACCACTCTTGGCCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp AAGGTGTCATGCGTTCTGCTGAACCCACTGGCTGGTATGAACATGAGGCTTGGGGACAAGGTCTGGAGCTaGAGCAGGAAACGGCACCCT +
Preference number: 4 (lower is better)
Translates to: KVSCVLLNPLAGMNMRLGDKVWS*SRKRHP
Trigger: AGGGTGCCGTTTCCTGCTCCAGCTCCAGACCTTGTC...CCCAAGCCTCATGTTCATACCAGCCAGTGGGTTCAGCAGAACGCATGACACCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp CACTGCAGATGTTTTCTGCAGACAAGGTCTGGAGCTGGAGCAGGAAACGGCACCGTAGCAGCCTTACTGTaGAGGGGCCAAAGCTGGTGT +
Preference number: 4 (lower is better)
Translates to: HCRCFLQTRSGAGAGNGTVAALL*RGQSWC
Trigger: ACACCAGCTTTGGCCCCTCCACAGTAAGGCTGCTAC...GGTGCCGTTTCCTGCTCCAGCTCCAGACCTTGTCTGCAGAAAACATCTGCAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp CTTGTCCACTCAGTGAGGCCAGACTTGTGCTCTAATCCACTCTCCTGTGGGTCCCTTATACTGGGGAGCTaGGCCTCTGGGCTGTCCAAA +
Preference number: 4 (lower is better)
Translates to: LVHSVRPDLCSNPLSCGSLILGS*ASGLSK
Trigger: TTTGGACAGCCCAGAGGCCCAGCTCCCCAGTATAAG...GGACCCACAGGAGAGTGGATTAGAGCACAAGTCTGGCCTCACTGAGTGGACAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp AAAAGGTTCCCAGGTGGGGTCCTCTGCCCACTTTGCCACCACATTCACATTCCACTGTATGGCTTATACTaGGGAGCTGGGCCTCTGGGC +
Preference number: 4 (lower is better)
Translates to: KRFPGGVLCPLCHHIHIPLYGLY*GAGPLG
Trigger: GCCCAGAGGCCCAGCTCCCCAGTATAAGCCATACAG...TGGAATGTGAATGTGGTGGCAAAGTGGGCAGAGGACCCCACCTGGGAACCTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp AAAAGGTTCCCAGGTGGGGTCCTCTGCCCACTTTGCCACCACATTCACATTCCAGGTCCCTGGCCTGTATaGCTTATACTGGGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: KRFPGGVLCPLCHHIHIPGPWPV*LILGSW
Trigger: CCAGCTCCCCAGTATAAGCCATACAGGCCAGGGACC...TGGAATGTGAATGTGGTGGCAAAGTGGGCAGAGGACCCCACCTGGGAACCTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp GAGGGAGGTGATAAGGTGTCATGCGTTCTGCTGAACCCACTGGCTGGTATGAACGGTCCCTGGCCTGTATaGCTTATACTGGGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: EGGDKVSCVLLNPLAGMNGPWPV*LILGSW
Trigger: CCAGCTCCCCAGTATAAGCCATACAGGCCAGGGACC...GTTCATACCAGCCAGTGGGTTCAGCAGAACGCATGACACCTTATCACCTCCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR TCA 90 bp CAGATGTTTTCTGCAGACAAGGTCTGGAGCTGGAGCAGGAAACGGCACCCTCTCCAGCTCGATCCTCAGTaGTGTCAAAGAGGACAGCAC +
Preference number: 4 (lower is better)
Translates to: QMFSADKVWSWSRKRHPLQLDPQ*CQRGQH
Trigger: GTGCTGTCCTCTTTGACATCACTGAGGATCGAGCTG...GAGAGGGTGCCGTTTCCTGCTCCAGCTCCAGACCTTGTCTGCAGAAAACATCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR TCA 90 bp ACTGAGGGAAAAAGGTTCCCAGGTGGGGTCCTCTGCCCACTTTGCCACCACATTCAGCTCGATCCTCAGTaGTGTCAAAGAGGACAGCAC +
Preference number: 4 (lower is better)
Translates to: TEGKRFPGGVLCPLCHHIQLDPQ*CQRGQH
Trigger: GTGCTGTCCTCTTTGACATCACTGAGGATCGAGCTG...AATGTGGTGGCAAAGTGGGCAGAGGACCCCACCTGGGAACCTTTTTCCCTCAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR TCA 90 bp ACCAAGGCTGCTGTACCCACCTCAGGGACAGAACTCCACACTATAGTGGGAAAGGCACCGAAGCCAGGATaGTCACAAAGATGGTGCCCA +
Preference number: 4 (lower is better)
Translates to: TKAAVPTSGTELHTIVGKAPKPG*SQRWCP
Trigger: TGGGCACCATCTTTGTGATCATCCTGGCTTCGGTGC...CTTTCCCACTATAGTGTGGAGTTCTGTCCCTGAGGTGGGTACAGCAGCCTTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR TCA 90 bp GAGCAGCACCTTTGTAACACCTGGCTACCCATAGCTAGCTTTCTGCCCTCAAAACATGGAGGCAGGAAATaGCCCGTAGCTCCTGCCCCT +
Preference number: 4 (lower is better)
Translates to: EQHLCNTWLPIASFLPSKHGGRK*PVAPAP
Trigger: AGGGGCAGGAGCTACGGGTCATTTCCTGCCTCCATG...TTTTGAGGGCAGAAAGCTAGCTATGGGTAGCCAGGTGTTACAAAGGTGCTGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR TCA 90 bp CTTGTCCACTCAGTGAGGCCAGACTTGTGCTCTAATCCACTCTCCTGTGGGTCCCTCTTGTCCACTCAGTaGGGCCAGACTTGTGCTCTA +
Preference number: 4 (lower is better)
Translates to: LVHSVRPDLCSNPLSCGSLLSTQ*GQTCAL
Trigger: TAGAGCACAAGTCTGGCCTCACTGAGTGGACAAGAG...GGACCCACAGGAGAGTGGATTAGAGCACAAGTCTGGCCTCACTGAGTGGACAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR TCA 90 bp GAGGGGCCAAGAGTGGTCAGGCTGCCCTGGGGTGAATGTCACCCTGATGAGGCCCTTCAGAATAAGTGCTaGAAAGCCAAGCAATTGAAC +
Preference number: 4 (lower is better)
Translates to: EGPRVVRLPWGECHPDEALQNKC*KAKQLN
Trigger: GTTCAATTGCTTGGCTTTTCAGCACTTATTCTGAAG...GGCCTCATCAGGGTGACATTCACCCCAGGGCAGCCTGACCACTCTTGGCCCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000584437.5
CDS-3UTR GCA 90 bp ACTCAGCCTTCAAGGGATCCAGCCCACACACGCCACAGGCAGCAGCTGGTTGCCCTAGCTAATACCAAATaGAGGTTCTCAGATCCAGAC +
Preference number: 4 (lower is better)
Translates to: TQPSRDPAHTRHRQQLVALANTK*RFSDPD
Trigger: GTCTGGATCTGAGAACCTGCATTTGGTATTAGCTAG...GGCAACCAGCTGCTGCCTGTGGCGTGTGTGGGCTGGATCCCTTGAAGGCTGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000584437.5
CDS-3UTR GCA 90 bp GAGCAGCACCTTTGTAACACCTGGCTACCCATAGCTAGCTTTCTGCCCTCAAAAAGACTCCACCGCTGCTaGCAGTACCAGTCCTGTGCG +
Preference number: 4 (lower is better)
Translates to: EQHLCNTWLPIASFLPSKRLHRC*QYQSCA
Trigger: CGCACAGGACTGGTACTGGCAGCAGCGGTGGAGTCT...TTTTGAGGGCAGAAAGCTAGCTATGGGTAGCCAGGTGTTACAAAGGTGCTGCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR GCA 90 bp TGGCTGGACATGGATTTGCTGCACTGCAGATGTTTTCTGCAGACAAGGTCTGGAAGACTCCACCGCTGCTaGCAGTACCAGTCCTGTGCG +
Preference number: 4 (lower is better)
Translates to: WLDMDLLHCRCFLQTRSGRLHRC*QYQSCA
Trigger: CGCACAGGACTGGTACTGGCAGCAGCGGTGGAGTCT...TCCAGACCTTGTCTGCAGAAAACATCTGCAGTGCAGCAAATCCATGTCCAGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR GCA 90 bp AAGGTGTCATGCGTTCTGCTGAACCCACTGGCTGGTATGAACATGAGGCTTGGGTTCAGACTCCACCGCTaGTGCCAGTACCAGTCCTGT +
Preference number: 4 (lower is better)
Translates to: KVSCVLLNPLAGMNMRLGFRLHR*CQYQSC
Trigger: ACAGGACTGGTACTGGCAGCAGCGGTGGAGTCTGAA...CCCAAGCCTCATGTTCATACCAGCCAGTGGGTTCAGCAGAACGCATGACACCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR GCA 90 bp TCCTTCCTCTGCCCAGATAAAGTCCAGCAGAAATTCCTCCTTTCTACCTCTCTGGGGCTGAGCTGCAGCTaGTCCCTGAGTCTGGCCACT +
Preference number: 4 (lower is better)
Translates to: SFLCPDKVQQKFLLSTSLGLSCS*SLSLAT
Trigger: AGTGGCCAGACTCAGGGAGCAGCTGCAGCTCAGCCC...CAGAGAGGTAGAAAGGAGGAATTTCTGCTGGACTTTATCTGGGCAGAGGAAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR GCA 90 bp TGGCTGGACATGGATTTGCTGCACTGCAGATGTTTTCTGCAGACAAGGTCTGGATGGGCATGGCCGGGATaGTGGCGAATGAGGTGGAGT +
Preference number: 4 (lower is better)
Translates to: WLDMDLLHCRCFLQTRSGWAWPG*WRMRWS
Trigger: ACTCCACCTCATTCGCCAGCATCCCGGCCATGCCCA...TCCAGACCTTGTCTGCAGAAAACATCTGCAGTGCAGCAAATCCATGTCCAGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR GCA 90 bp CAGATGTTTTCTGCAGACAAGGTCTGGAGCTGGAGCAGGAAACGGCACCCTCTCGGGGGTCAAAGTCACTaGTTAGGGAGCTGCAGAAAG +
Preference number: 4 (lower is better)
Translates to: QMFSADKVWSWSRKRHPLGGQSH*LGSCRK
Trigger: CTTTCTGCAGCTCCCTAAGCAGTGACTTTGACCCCC...GAGAGGGTGCCGTTTCCTGCTCCAGCTCCAGACCTTGTCTGCAGAAAACATCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR GCA 90 bp AAGGTGTCATGCGTTCTGCTGAACCCACTGGCTGGTATGAACATGAGGCTTGGGCCAGGCTTCCTGCCATaGCACTGGAACCGCTTTTTG +
Preference number: 4 (lower is better)
Translates to: KVSCVLLNPLAGMNMRLGPGFLP*HWNRFL
Trigger: CAAAAAGCGGTTCCAGTGGCATGGCAGGAAGCCTGG...CCCAAGCCTCATGTTCATACCAGCCAGTGGGTTCAGCAGAACGCATGACACCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR GCA 90 bp GAGCAGCACCTTTGTAACACCTGGCTACCCATAGCTAGCTTTCTGCCCTCAAAATGGTACTGGGGCAGATaGTGGAGGCGTCAACTGGGC +
Preference number: 4 (lower is better)
Translates to: EQHLCNTWLPIASFLPSKWYWGR*WRRQLG
Trigger: GCCCAGTTGACGCCTCCAGCATCTGCCCCAGTACCA...TTTTGAGGGCAGAAAGCTAGCTATGGGTAGCCAGGTGTTACAAAGGTGCTGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR GCA 90 bp TCCTTCCTCTGCCCAGATAAAGTCCAGCAGAAATTCCTCCTTTCTACCTCTCTGAGCTGGGTGCACAGTTaGATCCTGGGGCCGAGAGCC +
Preference number: 4 (lower is better)
Translates to: SFLCPDKVQQKFLLSTSLSWVHS*ILGPRA
Trigger: GGCTCTCGGCCCCAGGATGCAACTGTGCACCCAGCT...CAGAGAGGTAGAAAGGAGGAATTTCTGCTGGACTTTATCTGGGCAGAGGAAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR GCA 90 bp GGAGCTGGGCCTCTGGGCTGTCCAAACCCAAGGGTCACACTTTGCTTTTCCTTTTGGGGACCAAGGATATaGCACACTGGGGGTGTAATG +
Preference number: 4 (lower is better)
Translates to: GAGPLGCPNPRVTLCFSFWGPRI*HTGGVM
Trigger: CATTACACCCCCAGTGTGGCATATCCTTGGTCCCCA...AAAGGAAAAGCAAAGTGTGACCCTTGGGTTTGGACAGCCCAGAGGCCCAGCTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR GCA 90 bp CACTGCAGATGTTTTCTGCAGACAAGGTCTGGAGCTGGAGCAGGAAACGGCACCACAGATCAAGGGGTGTaGCTCTGGGGACCAAGGATA +
Preference number: 4 (lower is better)
Translates to: HCRCFLQTRSGAGAGNGTTDQGV*LWGPRI
Trigger: TATCCTTGGTCCCCAGAGGCACACCCCTTGATCTGT...GGTGCCGTTTCCTGCTCCAGCTCCAGACCTTGTCTGCAGAAAACATCTGCAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp GAGCAGCACCTTTGTAACACCTGGCTACCCATAGCTAGCTTTCTGCCCTCAAAACAAAGAGGACAGCACTaGCTCCTCGCTCACCCGCCA +
Preference number: 4 (lower is better)
Translates to: EQHLCNTWLPIASFLPSKQRGQH*LLAHPP
Trigger: TGGCGGGTGAGCGAGGAGCCAGTGCTGTCCTCTTTG...TTTTGAGGGCAGAAAGCTAGCTATGGGTAGCCAGGTGTTACAAAGGTGCTGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp CCTGGCTGGACATGGATTTGCTGCACTGCAGATGTTTTCTGCAGACAAGGTCTGACTCCTCCAGACAGATaGCACACACAGGGGCTGAGC +
Preference number: 4 (lower is better)
Translates to: PGWTWICCTADVFCRQGLTPPDR*HTQGLS
Trigger: GCTCAGCCCCTGTGTGTGCCATCTGTCTGGAGGAGT...CAGACCTTGTCTGCAGAAAACATCTGCAGTGCAGCAAATCCATGTCCAGCCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp TGCCCTCAAAAACTCAGCCTTCAAGGGATCCAGCCCACACACGCCACAGGCAGCGTGGAGTCTTCGACCTaGTTCTTGGTAAGATCGAGA +
Preference number: 4 (lower is better)
Translates to: CPQKLSLQGIQPTHATGSVESST*FLVRSR
Trigger: TCTCGATCTTACCAAGAACCAGGTCGAAGACTCCAC...GCTGCCTGTGGCGTGTGTGGGCTGGATCCCTTGAAGGCTGAGTTTTTGAGGGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp AAAGCTGGTGTTCAGAGCTCACCCAAGGAGGGAGGTGATAAGGTGTCATGCGTTGCATGGCCGGGATGCTaGCGAATGAGGTGGAGTCTT +
Preference number: 4 (lower is better)
Translates to: KAGVQSSPKEGGDKVSCVAWPGC*RMRWSL
Trigger: AAGACTCCACCTCATTCGCCAGCATCCCGGCCATGC...AACGCATGACACCTTATCACCTCCCTCCTTGGGTGAGCTCTGAACACCAGCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp AAAGCTGGTGTTCAGAGCTCACCCAAGGAGGGAGGTGATAAGGTGTCATGCGTTGAGGTGGATTGGAGGTaGCTCAGTCCCCAGCCTTGT +
Preference number: 4 (lower is better)
Translates to: KAGVQSSPKEGGDKVSCVEVDWR*LSPQPC
Trigger: ACAAGGCTGGGGACTGAGCCACCTCCAATCCACCTC...AACGCATGACACCTTATCACCTCCCTCCTTGGGTGAGCTCTGAACACCAGCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp CCTGGCTGGACATGGATTTGCTGCACTGCAGATGTTTTCTGCAGACAAGGTCTGTGCATGTCCACTCGCTaGGGATCCCCTTTAGGGCTG +
Preference number: 4 (lower is better)
Translates to: PGWTWICCTADVFCRQGLCMSTR*GSPLGL
Trigger: CAGCCCTAAAGGGGATCCCCAGCGAGTGGACATGCA...CAGACCTTGTCTGCAGAAAACATCTGCAGTGCAGCAAATCCATGTCCAGCCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp TGGCTGGACATGGATTTGCTGCACTGCAGATGTTTTCTGCAGACAAGGTCTGGAATAGGAGGCCTGGACTaGGGGACTCCGGTTTCTGGG +
Preference number: 4 (lower is better)
Translates to: WLDMDLLHCRCFLQTRSGIGGLD*GTPVSG
Trigger: CCCAGAAACCGGAGTCCCCCAGTCCAGGCCTCCTAT...TCCAGACCTTGTCTGCAGAAAACATCTGCAGTGCAGCAAATCCATGTCCAGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp GAGCAGCACCTTTGTAACACCTGGCTACCCATAGCTAGCTTTCTGCCCTCAAAACCGCCTTTTCCTCTGTaGGTGTCGGGCAGAGAGGCT +
Preference number: 4 (lower is better)
Translates to: EQHLCNTWLPIASFLPSKPPFPL*VSGREA
Trigger: AGCCTCTCTGCCCGACACCCACAGAGGAAAAGGCGG...TTTTGAGGGCAGAAAGCTAGCTATGGGTAGCCAGGTGTTACAAAGGTGCTGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp CCTGGCTGGACATGGATTTGCTGCACTGCAGATGTTTTCTGCAGACAAGGTCTGCAAGGGGTGTGCCTCTaGGGACCAAGGATATGCCAC +
Preference number: 4 (lower is better)
Translates to: PGWTWICCTADVFCRQGLQGVCL*GPRICH
Trigger: GTGGCATATCCTTGGTCCCCAGAGGCACACCCCTTG...CAGACCTTGTCTGCAGAAAACATCTGCAGTGCAGCAAATCCATGTCCAGCCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp GGTGATAAGGTGTCATGCGTTCTGCTGAACCCACTGGCTGGTATGAACATGAGGCAAGGGGTGTGCCTCTaGGGACCAAGGATATGCCAC +
Preference number: 4 (lower is better)
Translates to: GDKVSCVLLNPLAGMNMRQGVCL*GPRICH
Trigger: GTGGCATATCCTTGGTCCCCAGAGGCACACCCCTTG...CCTCATGTTCATACCAGCCAGTGGGTTCAGCAGAACGCATGACACCTTATCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp AAAGCTGGTGTTCAGAGCTCACCCAAGGAGGGAGGTGATAAGGTGTCATGCGTTCCTCTTGTCCAGGCCTaGAGGTCCACAGATCAAGGG +
Preference number: 4 (lower is better)
Translates to: KAGVQSSPKEGGDKVSCVPLVQA*RSTDQG
Trigger: CCCTTGATCTGTGGACCTCCAGGCCTGGACAAGAGG...AACGCATGACACCTTATCACCTCCCTCCTTGGGTGAGCTCTGAACACCAGCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp TGGCTGGACATGGATTTGCTGCACTGCAGATGTTTTCTGCAGACAAGGTCTGGATGTGGTTCCAGGGGCTaGCGAGGAGTCAGGCACAAC +
Preference number: 4 (lower is better)
Translates to: WLDMDLLHCRCFLQTRSGCGSRG*RGVRHN
Trigger: GTTGTGCCTGACTCCTCGCCAGCCCCTGGAACCACA...TCCAGACCTTGTCTGCAGAAAACATCTGCAGTGCAGCAAATCCATGTCCAGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp CTTTGTTGTCCCCGCTCAGCTGTAATTCTGCCTTTTCTACCTTCATTCCATCCTTCCTCTGAGCCAGGCTaGGCCGACAGCACCTGGCAG +
Preference number: 4 (lower is better)
Translates to: LCCPRSAVILPFLPSFHPSSEPG*ADSTWQ
Trigger: CTGCCAGGTGCTGTCGGCCCAGCCTGGCTCAGAGGA...AGGATGGAATGAAGGTAGAAAAGGCAGAATTACAGCTGAGCGGGGACAACAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp AGCAGCTGGTTGCCTGGCTGGACATGGATTTGCTGCACTGCAGATGTTTTCTGCCAGCAGCTGGTTGCCTaGCTGGACATGGATTTGCTG +
Preference number: 4 (lower is better)
Translates to: SSWLPGWTWICCTADVFCQQLVA*LDMDLL
Trigger: CAGCAAATCCATGTCCAGCCAGGCAACCAGCTGCTG...GCAGAAAACATCTGCAGTGCAGCAAATCCATGTCCAGCCAGGCAACCAGCTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp CAGATGTTTTCTGCAGACAAGGTCTGGAGCTGGAGCAGGAAACGGCACCCTCTCGCTGAACCCACTGGCTaGTATGAACATGAGGCTTGG +
Preference number: 4 (lower is better)
Translates to: QMFSADKVWSWSRKRHPLAEPTG*YEHEAW
Trigger: CCAAGCCTCATGTTCATACCAGCCAGTGGGTTCAGC...GAGAGGGTGCCGTTTCCTGCTCCAGCTCCAGACCTTGTCTGCAGAAAACATCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp AGCAGCTGGTTGCCTGGCTGGACATGGATTTGCTGCACTGCAGATGTTTTCTGCGTAGCAGCCTTACTGTaGAGGGGCCAAAGCTGGTGT +
Preference number: 4 (lower is better)
Translates to: SSWLPGWTWICCTADVFCVAALL*RGQSWC
Trigger: ACACCAGCTTTGGCCCCTCCACAGTAAGGCTGCTAC...GCAGAAAACATCTGCAGTGCAGCAAATCCATGTCCAGCCAGGCAACCAGCTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp AAGGTGTCATGCGTTCTGCTGAACCCACTGGCTGGTATGAACATGAGGCTTGGGGTAGCAGCCTTACTGTaGAGGGGCCAAAGCTGGTGT +
Preference number: 4 (lower is better)
Translates to: KVSCVLLNPLAGMNMRLGVAALL*RGQSWC
Trigger: ACACCAGCTTTGGCCCCTCCACAGTAAGGCTGCTAC...CCCAAGCCTCATGTTCATACCAGCCAGTGGGTTCAGCAGAACGCATGACACCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp AAAAGGTTCCCAGGTGGGGTCCTCTGCCCACTTTGCCACCACATTCACATTCCACTTATACTGGGGAGCTaGGCCTCTGGGCTGTCCAAA +
Preference number: 4 (lower is better)
Translates to: KRFPGGVLCPLCHHIHIPLILGS*ASGLSK
Trigger: TTTGGACAGCCCAGAGGCCCAGCTCCCCAGTATAAG...TGGAATGTGAATGTGGTGGCAAAGTGGGCAGAGGACCCCACCTGGGAACCTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
3UTR CAA 72 bp CACAGGCAGCAGCTGGTTGCCTGGCTGGACATGGATTaGCTGCACTGCAGATGTTTTCTGCAGACAAGGTCT +
Preference number: 4 (lower is better)
Translates to: HRQQLVAWLDMD*LHCRCFLQTRS
Trigger: AGACCTTGTCTGCAGAAAACATCTGCAGTGCAGCAAATCCATGTCCAGCCAGGCAACCAGCTGCTGCCTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR TCA 90 bp CTTTGTTGTCCCCGCTCAGCTGTAATTCTGCCTTTTCTACCTTCATTCCATCCTCAGGCTGTTCTCTGCTaGAGCGGATCCGGCCTGCTG +
Preference number: 4 (lower is better)
Translates to: LCCPRSAVILPFLPSFHPQAVLC*SGSGLL
Trigger: CAGCAGGCCGGATCCGCTTCAGCAGAGAACAGCCTG...AGGATGGAATGAAGGTAGAAAAGGCAGAATTACAGCTGAGCGGGGACAACAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR TCA 90 bp AGTCCTCTTCCAGTGCTTCTAGGAAGTACGGCAAAAAGAATGGTGTTTGCTGTGCAGGCTGTTCTCTGCTaGAGCGGATCCGGCCTGCTG +
Preference number: 4 (lower is better)
Translates to: SPLPVLLGSTAKRMVFAVQAVLC*SGSGLL
Trigger: CAGCAGGCCGGATCCGCTTCAGCAGAGAACAGCCTG...CACAGCAAACACCATTCTTTTTGCCGTACTTCCTAGAAGCACTGGAAGAGGACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR TCA 90 bp TCCTTCCTCTGCCCAGATAAAGTCCAGCAGAAATTCCTCCTTTCTACCTCTCTGAGCAGCAGGGTGCTGTaGGGTGGATTGGAGGTGGCT +
Preference number: 4 (lower is better)
Translates to: SFLCPDKVQQKFLLSTSLSSRVL*GGLEVA
Trigger: AGCCACCTCCAATCCACCTCACAGCACCCTGCTGCT...CAGAGAGGTAGAAAGGAGGAATTTCTGCTGGACTTTATCTGGGCAGAGGAAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR TCA 90 bp ACCAAGGCTGCTGTACCCACCTCAGGGACAGAACTCCACACTATAGTGGGAAAGGATCTGGTGACTTGCTaGTCAGGAGAAGGTGGCTCT +
Preference number: 4 (lower is better)
Translates to: TKAAVPTSGTELHTIVGKDLVTC*SGEGGS
Trigger: AGAGCCACCTTCTCCTGATCAGCAAGTCACCAGATC...CTTTCCCACTATAGTGTGGAGTTCTGTCCCTGAGGTGGGTACAGCAGCCTTGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR TCA 90 bp TGCCCTCAAAAACTCAGCCTTCAAGGGATCCAGCCCACACACGCCACAGGCAGCTGGATTTTTGCAAGTTaGACAGACTGCTGGTACTGG +
Preference number: 4 (lower is better)
Translates to: CPQKLSLQGIQPTHATGSWIFAS*TDCWYW
Trigger: CCAGTACCAGCAGTCTGTTCAACTTGCAAAAATCCA...GCTGCCTGTGGCGTGTGTGGGCTGGATCCCTTGAAGGCTGAGTTTTTGAGGGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR TCA 90 bp TGGCTGGACATGGATTTGCTGCACTGCAGATGTTTTCTGCAGACAAGGTCTGGAAGCCAGGGTTGCCCCTaGTGTAGCAGCCTTACTGTG +
Preference number: 4 (lower is better)
Translates to: WLDMDLLHCRCFLQTRSGSQGCP*CSSLTV
Trigger: CACAGTAAGGCTGCTACATCAGGGGCAACCCTGGCT...TCCAGACCTTGTCTGCAGAAAACATCTGCAGTGCAGCAAATCCATGTCCAGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR TCA 90 bp ACTGAGGGAAAAAGGTTCCCAGGTGGGGTCCTCTGCCCACTTTGCCACCACATTACCTCTCTGGGACTCTaGGACAGGAAATCTTCAAGG +
Preference number: 4 (lower is better)
Translates to: TEGKRFPGGVLCPLCHHITSLGL*DRKSSR
Trigger: CCTTGAAGATTTCCTGTCTCAGAGTCCCAGAGAGGT...AATGTGGTGGCAAAGTGGGCAGAGGACCCCACCTGGGAACCTTTTTCCCTCAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR TCA 90 bp AGGCAGCAGCTGGTTGCCTGGCTGGACATGGATTTGCTGCACTGCAGATGTTTTAAATGGGATAATGCCTaGGGGGCCAAGAGTGGTCAG +
Preference number: 4 (lower is better)
Translates to: RQQLVAWLDMDLLHCRCFKWDNA*GAKSGQ
Trigger: CTGACCACTCTTGGCCCCTCAGGCATTATCCCATTT...AAAACATCTGCAGTGCAGCAAATCCATGTCCAGCCAGGCAACCAGCTGCTGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR TCA 90 bp AAGGTGTCATGCGTTCTGCTGAACCCACTGGCTGGTATGAACATGAGGCTTGGGAAATGGGATAATGCCTaGGGGGCCAAGAGTGGTCAG +
Preference number: 4 (lower is better)
Translates to: KVSCVLLNPLAGMNMRLGKWDNA*GAKSGQ
Trigger: CTGACCACTCTTGGCCCCTCAGGCATTATCCCATTT...CCCAAGCCTCATGTTCATACCAGCCAGTGGGTTCAGCAGAACGCATGACACCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR GCA 90 bp ACTGAGGGAAAAAGGTTCCCAGGTGGGGTCCTCTGCCCACTTTGCCACCACATTCATACTACAGGTAGGTaGCGAGAAATTCCGCAGCCT +
Preference number: 4 (lower is better)
Translates to: TEGKRFPGGVLCPLCHHIHTTGR*REIPQP
Trigger: AGGCTGCGGAATTTCTCGGCACCTACCTGTAGTATG...AATGTGGTGGCAAAGTGGGCAGAGGACCCCACCTGGGAACCTTTTTCCCTCAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000584437.5
CDS-3UTR GCA 90 bp CACTGCAGATGTTTTCTGCAGACAAGGTCTGGAGCTGGAGCAGGAAACGGCACCTCCACCTTCTTACTCTaGAACCAAACCAAGTGCCCC +
Preference number: 4 (lower is better)
Translates to: HCRCFLQTRSGAGAGNGTSTFLL*NQTKCP
Trigger: GGGGCACTTGGTTTGGTTGCAGAGTAAGAAGGTGGA...GGTGCCGTTTCCTGCTCCAGCTCCAGACCTTGTCTGCAGAAAACATCTGCAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000584437.5
CDS-3UTR GCA 90 bp CAGATGTTTTCTGCAGACAAGGTCTGGAGCTGGAGCAGGAAACGGCACCCTCTCCCATATGCATCAAGTTaGCAGGCACTGTTGCGCTGT +
Preference number: 4 (lower is better)
Translates to: QMFSADKVWSWSRKRHPLPYASS*QALLRC
Trigger: ACAGCGCAACAGTGCCTGGCAACTTGATGCATATGG...GAGAGGGTGCCGTTTCCTGCTCCAGCTCCAGACCTTGTCTGCAGAAAACATCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407977.7
CDS-3UTR GCA 90 bp TGGCTGGACATGGATTTGCTGCACTGCAGATGTTTTCTGCAGACAAGGTCTGGACCAGTACCAGTCCTGTaGGTCCAAAGCCTGCCTGCA +
Preference number: 4 (lower is better)
Translates to: WLDMDLLHCRCFLQTRSGPVPVL*VQSLPA
Trigger: TGCAGGCAGGCTTTGGACGCACAGGACTGGTACTGG...TCCAGACCTTGTCTGCAGAAAACATCTGCAGTGCAGCAAATCCATGTCCAGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR GCA 90 bp AAGAACTCTTTGTTGTCCCCGCTCAGCTGTAATTCTGCCTTTTCTACCTTCATTCACTCACCCCGGGCCTaGCTGCAGCTGGCCTGGTAC +
Preference number: 4 (lower is better)
Translates to: KNSLLSPLSCNSAFSTFIHSPRA*LQLAWY
Trigger: GTACCAGGCCAGCTGCAGGCAGGCCCGGGGTGAGTG...AATGAAGGTAGAAAAGGCAGAATTACAGCTGAGCGGGGACAACAAAGAGTTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR GCA 90 bp AAACTTTTCCCAGAGAAGAACTCTTTGTTGTCCCCGCTCAGCTGTAATTCTGCCGGGCTGAGCTGCAGCTaGTCCCTGAGTCTGGCCACT +
Preference number: 4 (lower is better)
Translates to: KLFPEKNSLLSPLSCNSAGLSCS*SLSLAT
Trigger: AGTGGCCAGACTCAGGGAGCAGCTGCAGCTCAGCCC...GGCAGAATTACAGCTGAGCGGGGACAACAAAGAGTTCTTCTCTGGGAAAAGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR GCA 90 bp AAGAACTCTTTGTTGTCCCCGCTCAGCTGTAATTCTGCCTTTTCTACCTTCATTTGGGGGCCGAGCCACTaGACTCCGGGAAGGGCCCAA +
Preference number: 4 (lower is better)
Translates to: KNSLLSPLSCNSAFSTFIWGPSH*TPGRAQ
Trigger: TTGGGCCCTTCCCGGAGTGCAGTGGCTCGGCCCCCA...AATGAAGGTAGAAAAGGCAGAATTACAGCTGAGCGGGGACAACAAAGAGTTCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR GCA 90 bp AAACTTTTCCCAGAGAAGAACTCTTTGTTGTCCCCGCTCAGCTGTAATTCTGCCCAGTCCCCAGCCTTGTaGATAGGGGTGCTGGGCTCC +
Preference number: 4 (lower is better)
Translates to: KLFPEKNSLLSPLSCNSAQSPAL*IGVLGS
Trigger: GGAGCCCAGCACCCCTATGCACAAGGCTGGGGACTG...GGCAGAATTACAGCTGAGCGGGGACAACAAAGAGTTCTTCTCTGGGAAAAGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR GCA 90 bp CACTGCAGATGTTTTCTGCAGACAAGGTCTGGAGCTGGAGCAGGAAACGGCACCCTGCCAGGTACCCACTaGGTTCTGTGCAATAGCTTT +
Preference number: 4 (lower is better)
Translates to: HCRCFLQTRSGAGAGNGTLPGTH*VLCNSF
Trigger: AAAGCTATTGCACAGAACGCAGTGGGTACCTGGCAG...GGTGCCGTTTCCTGCTCCAGCTCCAGACCTTGTCTGCAGAAAACATCTGCAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR GCA 90 bp CCTGGCTGGACATGGATTTGCTGCACTGCAGATGTTTTCTGCAGACAAGGTCTGCCAGGCTTCCTGCCATaGCACTGGAACCGCTTTTTG +
Preference number: 4 (lower is better)
Translates to: PGWTWICCTADVFCRQGLPGFLP*HWNRFL
Trigger: CAAAAAGCGGTTCCAGTGGCATGGCAGGAAGCCTGG...CAGACCTTGTCTGCAGAAAACATCTGCAGTGCAGCAAATCCATGTCCAGCCAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR GCA 90 bp AAAGCTGGTGTTCAGAGCTCACCCAAGGAGGGAGGTGATAAGGTGTCATGCGTTCCAGGCTTCCTGCCATaGCACTGGAACCGCTTTTTG +
Preference number: 4 (lower is better)
Translates to: KAGVQSSPKEGGDKVSCVPGFLP*HWNRFL
Trigger: CAAAAAGCGGTTCCAGTGGCATGGCAGGAAGCCTGG...AACGCATGACACCTTATCACCTCCCTCCTTGGGTGAGCTCTGAACACCAGCTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR GCA 90 bp TCCTTCCTCTGCCCAGATAAAGTCCAGCAGAAATTCCTCCTTTCTACCTCTCTGTGGTACTGGGGCAGATaGTGGAGGCGTCAACTGGGC +
Preference number: 4 (lower is better)
Translates to: SFLCPDKVQQKFLLSTSLWYWGR*WRRQLG
Trigger: GCCCAGTTGACGCCTCCAGCATCTGCCCCAGTACCA...CAGAGAGGTAGAAAGGAGGAATTTCTGCTGGACTTTATCTGGGCAGAGGAAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR GCA 90 bp AAGGTGTCATGCGTTCTGCTGAACCCACTGGCTGGTATGAACATGAGGCTTGGGTGGGGACCAAGGATATaGCACACTGGGGGTGTAATG +
Preference number: 4 (lower is better)
Translates to: KVSCVLLNPLAGMNMRLGWGPRI*HTGGVM
Trigger: CATTACACCCCCAGTGTGGCATATCCTTGGTCCCCA...CCCAAGCCTCATGTTCATACCAGCCAGTGGGTTCAGCAGAACGCATGACACCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR GCA 90 bp AGGCAGCAGCTGGTTGCCTGGCTGGACATGGATTTGCTGCACTGCAGATGTTTTACAGATCAAGGGGTGTaGCTCTGGGGACCAAGGATA +
Preference number: 4 (lower is better)
Translates to: RQQLVAWLDMDLLHCRCFTDQGV*LWGPRI
Trigger: TATCCTTGGTCCCCAGAGGCACACCCCTTGATCTGT...AAAACATCTGCAGTGCAGCAAATCCATGTCCAGCCAGGCAACCAGCTGCTGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR GCA 90 bp TGGCTGGACATGGATTTGCTGCACTGCAGATGTTTTCTGCAGACAAGGTCTGGAAGGAGCAGGACTCTGTaGCAGGTAGGGCCCAAACAC +
Preference number: 4 (lower is better)
Translates to: WLDMDLLHCRCFLQTRSGRSRTL*QVGPKH
Trigger: GTGTTTGGGCCCTACCTGGCACAGAGTCCTGCTCCT...TCCAGACCTTGTCTGCAGAAAACATCTGCAGTGCAGCAAATCCATGTCCAGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR GCA 90 bp CACTGCAGATGTTTTCTGCAGACAAGGTCTGGAGCTGGAGCAGGAAACGGCACCGTGAGGCCAGACTTGTaGTCTAATCCACTCTCCTGT +
Preference number: 4 (lower is better)
Translates to: HCRCFLQTRSGAGAGNGTVRPDL*SNPLSC
Trigger: ACAGGAGAGTGGATTAGAGCACAAGTCTGGCCTCAC...GGTGCCGTTTCCTGCTCCAGCTCCAGACCTTGTCTGCAGAAAACATCTGCAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR GCA 90 bp CAGATGTTTTCTGCAGACAAGGTCTGGAGCTGGAGCAGGAAACGGCACCCTCTCGTGAGGCCAGACTTGTaGTCTAATCCACTCTCCTGT +
Preference number: 4 (lower is better)
Translates to: QMFSADKVWSWSRKRHPLVRPDL*SNPLSC
Trigger: ACAGGAGAGTGGATTAGAGCACAAGTCTGGCCTCAC...GAGAGGGTGCCGTTTCCTGCTCCAGCTCCAGACCTTGTCTGCAGAAAACATCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR GCA 90 bp CTTGTCCACTCAGTGAGGCCAGACTTGTGCTCTAATCCACTCTCCTGTGGGTCCCCCGCCATCCGAGCCTaGATTAATTTTCCTTCTGCT +
Preference number: 4 (lower is better)
Translates to: LVHSVRPDLCSNPLSCGSPAIRA*INFPSA
Trigger: AGCAGAAGGAAAATTAATGCAGGCTCGGATGGCGGG...GGACCCACAGGAGAGTGGATTAGAGCACAAGTCTGGCCTCACTGAGTGGACAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000583753.5
CDS-3UTR CCA 90 bp CTTTGTTGTCCCCGCTCAGCTGTAATTCTGCCTTTTCTACCTTCATTCCATCCTCTCCTGGTGGCCAGCTaGCTGATGGCCCAGGCTGTT +
Preference number: 4 (lower is better)
Translates to: LCCPRSAVILPFLPSFHPLLVAS*LMAQAV
Trigger: AACAGCCTGGGCCATCAGCCAGCTGGCCACCAGGAG...AGGATGGAATGAAGGTAGAAAAGGCAGAATTACAGCTGAGCGGGGACAACAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp AAGAACTCTTTGTTGTCCCCGCTCAGCTGTAATTCTGCCTTTTCTACCTTCATTGGGCCTGCCTGCAGCTaGCCTGGTACCTCCTGGTGG +
Preference number: 4 (lower is better)
Translates to: KNSLLSPLSCNSAFSTFIGPACS*PGTSWW
Trigger: CCACCAGGAGGTACCAGGCCAGCTGCAGGCAGGCCC...AATGAAGGTAGAAAAGGCAGAATTACAGCTGAGCGGGGACAACAAAGAGTTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp AGGCAGCAGCTGGTTGCCTGGCTGGACATGGATTTGCTGCACTGCAGATGTTTTGAGGGTCCCAGGGACTaGGAAAATGAATCTCCCTCT +
Preference number: 4 (lower is better)
Translates to: RQQLVAWLDMDLLHCRCFEGPRD*ENESPS
Trigger: AGAGGGAGATTCATTTTCCCAGTCCCTGGGACCCTC...AAAACATCTGCAGTGCAGCAAATCCATGTCCAGCCAGGCAACCAGCTGCTGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp ACCAAGGCTGCTGTACCCACCTCAGGGACAGAACTCCACACTATAGTGGGAAAGGAGGGTCCCAGGGACTaGGAAAATGAATCTCCCTCT +
Preference number: 4 (lower is better)
Translates to: TKAAVPTSGTELHTIVGKEGPRD*ENESPS
Trigger: AGAGGGAGATTCATTTTCCCAGTCCCTGGGACCCTC...CTTTCCCACTATAGTGTGGAGTTCTGTCCCTGAGGTGGGTACAGCAGCCTTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp AAAAGGTTCCCAGGTGGGGTCCTCTGCCCACTTTGCCACCACATTCACATTCCATGCTGGCGAATGAGGTaGAGTCTTCGACCTGGTTCT +
Preference number: 4 (lower is better)
Translates to: KRFPGGVLCPLCHHIHIPCWRMR*SLRPGS
Trigger: AGAACCAGGTCGAAGACTCCACCTCATTCGCCAGCA...TGGAATGTGAATGTGGTGGCAAAGTGGGCAGAGGACCCCACCTGGGAACCTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp AAACTTTTCCCAGAGAAGAACTCTTTGTTGTCCCCGCTCAGCTGTAATTCTGCCGGGGATGTGCAGCTCTaGGGAAGCGGTGATGCCGAG +
Preference number: 4 (lower is better)
Translates to: KLFPEKNSLLSPLSCNSAGDVQL*GSGDAE
Trigger: CTCGGCATCACCGCTTCCCCAGAGCTGCACATCCCC...GGCAGAATTACAGCTGAGCGGGGACAACAAAGAGTTCTTCTCTGGGAAAAGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp GAGCAGCACCTTTGTAACACCTGGCTACCCATAGCTAGCTTTCTGCCCTCAAAATGCATGTCCACTCGCTaGGGATCCCCTTTAGGGCTG +
Preference number: 4 (lower is better)
Translates to: EQHLCNTWLPIASFLPSKCMSTR*GSPLGL
Trigger: CAGCCCTAAAGGGGATCCCCAGCGAGTGGACATGCA...TTTTGAGGGCAGAAAGCTAGCTATGGGTAGCCAGGTGTTACAAAGGTGCTGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp GGTGATAAGGTGTCATGCGTTCTGCTGAACCCACTGGCTGGTATGAACATGAGGGGTAGTGGACATGGCTaGAAACCTGGGTTTCCCCTG +
Preference number: 4 (lower is better)
Translates to: GDKVSCVLLNPLAGMNMRGSGHG*KPGFPL
Trigger: CAGGGGAAACCCAGGTTTCCAGCCATGTCCACTACC...CCTCATGTTCATACCAGCCAGTGGGTTCAGCAGAACGCATGACACCTTATCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp AAACTTTTCCCAGAGAAGAACTCTTTGTTGTCCCCGCTCAGCTGTAATTCTGCCGGGGACTCCGGTTTCTaGGCCAGGCTTCCTGCCATG +
Preference number: 4 (lower is better)
Translates to: KLFPEKNSLLSPLSCNSAGDSGF*ARLPAM
Trigger: CATGGCAGGAAGCCTGGCCCAGAAACCGGAGTCCCC...GGCAGAATTACAGCTGAGCGGGGACAACAAAGAGTTCTTCTCTGGGAAAAGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp AAGAACTCTTTGTTGTCCCCGCTCAGCTGTAATTCTGCCTTTTCTACCTTCATTGCTGGAGGCGTCAACTaGGCCAGGGGCTGGCTCAGG +
Preference number: 4 (lower is better)
Translates to: KNSLLSPLSCNSAFSTFIAGGVN*ARGWLR
Trigger: CCTGAGCCAGCCCCTGGCCCAGTTGACGCCTCCAGC...AATGAAGGTAGAAAAGGCAGAATTACAGCTGAGCGGGGACAACAAAGAGTTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp GAGCAGCACCTTTGTAACACCTGGCTACCCATAGCTAGCTTTCTGCCCTCAAAACAAGGGGTGTGCCTCTaGGGACCAAGGATATGCCAC +
Preference number: 4 (lower is better)
Translates to: EQHLCNTWLPIASFLPSKQGVCL*GPRICH
Trigger: GTGGCATATCCTTGGTCCCCAGAGGCACACCCCTTG...TTTTGAGGGCAGAAAGCTAGCTATGGGTAGCCAGGTGTTACAAAGGTGCTGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp GAGCAGCACCTTTGTAACACCTGGCTACCCATAGCTAGCTTTCTGCCCTCAAAAGACAAGGTCTGGAGCTaGAGCAGGAAACGGCACCCT +
Preference number: 4 (lower is better)
Translates to: EQHLCNTWLPIASFLPSKDKVWS*SRKRHP
Trigger: AGGGTGCCGTTTCCTGCTCCAGCTCCAGACCTTGTC...TTTTGAGGGCAGAAAGCTAGCTATGGGTAGCCAGGTGTTACAAAGGTGCTGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp AAAGCTGGTGTTCAGAGCTCACCCAAGGAGGGAGGTGATAAGGTGTCATGCGTTCAGCAGCTGGTTGCCTaGCTGGACATGGATTTGCTG +
Preference number: 4 (lower is better)
Translates to: KAGVQSSPKEGGDKVSCVQQLVA*LDMDLL
Trigger: CAGCAAATCCATGTCCAGCCAGGCAACCAGCTGCTG...AACGCATGACACCTTATCACCTCCCTCCTTGGGTGAGCTCTGAACACCAGCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp AAAGCTGGTGTTCAGAGCTCACCCAAGGAGGGAGGTGATAAGGTGTCATGCGTTTGGAGGGGCCAAAGCTaGTGTTCAGAGCTCACCCAA +
Preference number: 4 (lower is better)
Translates to: KAGVQSSPKEGGDKVSCVWRGQS*CSELTQ
Trigger: TTGGGTGAGCTCTGAACACCAGCTTTGGCCCCTCCA...AACGCATGACACCTTATCACCTCCCTCCTTGGGTGAGCTCTGAACACCAGCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp CCTGGCTGGACATGGATTTGCTGCACTGCAGATGTTTTCTGCAGACAAGGTCTGTGGAGGGGCCAAAGCTaGTGTTCAGAGCTCACCCAA +
Preference number: 4 (lower is better)
Translates to: PGWTWICCTADVFCRQGLWRGQS*CSELTQ
Trigger: TTGGGTGAGCTCTGAACACCAGCTTTGGCCCCTCCA...CAGACCTTGTCTGCAGAAAACATCTGCAGTGCAGCAAATCCATGTCCAGCCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp GGTGATAAGGTGTCATGCGTTCTGCTGAACCCACTGGCTGGTATGAACATGAGGGTAGCAGCCTTACTGTaGAGGGGCCAAAGCTGGTGT +
Preference number: 4 (lower is better)
Translates to: GDKVSCVLLNPLAGMNMRVAALL*RGQSWC
Trigger: ACACCAGCTTTGGCCCCTCCACAGTAAGGCTGCTAC...CCTCATGTTCATACCAGCCAGTGGGTTCAGCAGAACGCATGACACCTTATCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp TGCCCTCAAAAACTCAGCCTTCAAGGGATCCAGCCCACACACGCCACAGGCAGCTCCTTTCTACCTCTCTaGGACTCTGAGACAGGAAAT +
Preference number: 4 (lower is better)
Translates to: CPQKLSLQGIQPTHATGSSFLPL*DSETGN
Trigger: ATTTCCTGTCTCAGAGTCCCAGAGAGGTAGAAAGGA...GCTGCCTGTGGCGTGTGTGGGCTGGATCCCTTGAAGGCTGAGTTTTTGAGGGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp GGTGATAAGGTGTCATGCGTTCTGCTGAACCCACTGGCTGGTATGAACATGAGGCTTATACTGGGGAGCTaGGCCTCTGGGCTGTCCAAA +
Preference number: 4 (lower is better)
Translates to: GDKVSCVLLNPLAGMNMRLILGS*ASGLSK
Trigger: TTTGGACAGCCCAGAGGCCCAGCTCCCCAGTATAAG...CCTCATGTTCATACCAGCCAGTGGGTTCAGCAGAACGCATGACACCTTATCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp TGGCTGGACATGGATTTGCTGCACTGCAGATGTTTTCTGCAGACAAGGTCTGGACTGTATGGCTTATACTaGGGAGCTGGGCCTCTGGGC +
Preference number: 4 (lower is better)
Translates to: WLDMDLLHCRCFLQTRSGLYGLY*GAGPLG
Trigger: GCCCAGAGGCCCAGCTCCCCAGTATAAGCCATACAG...TCCAGACCTTGTCTGCAGAAAACATCTGCAGTGCAGCAAATCCATGTCCAGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp TGGCTGGACATGGATTTGCTGCACTGCAGATGTTTTCTGCAGACAAGGTCTGGAGTGGTCAGGCTGCCCTaGGGTGAATGTCACCCTGAT +
Preference number: 4 (lower is better)
Translates to: WLDMDLLHCRCFLQTRSGVVRLP*GECHPD
Trigger: ATCAGGGTGACATTCACCCCAGGGCAGCCTGACCAC...TCCAGACCTTGTCTGCAGAAAACATCTGCAGTGCAGCAAATCCATGTCCAGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR TCA 90 bp GGAGCTGGGCCTCTGGGCTGTCCAAACCCAAGGGTCACACTTTGCTTTTCCTTTAAATTTACTCCGGGATaGGAGATGCTGTCCCCTAGA +
Preference number: 4 (lower is better)
Translates to: GAGPLGCPNPRVTLCFSFKFTPG*EMLSPR
Trigger: TCTAGGGGACAGCATCTCTCATCCCGGAGTAAATTT...AAAGGAAAAGCAAAGTGTGACCCTTGGGTTTGGACAGCCCAGAGGCCCAGCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000584437.5
CDS-3UTR TCA 90 bp CTTTGTTGTCCCCGCTCAGCTGTAATTCTGCCTTTTCTACCTTCATTCCATCCTCGGGATGCTGGCGAATaGGGTGGAGTCTTCGACCTG +
Preference number: 4 (lower is better)
Translates to: LCCPRSAVILPFLPSFHPRDAGE*GGVFDL
Trigger: CAGGTCGAAGACTCCACCTCATTCGCCAGCATCCCG...AGGATGGAATGAAGGTAGAAAAGGCAGAATTACAGCTGAGCGGGGACAACAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR TCA 90 bp AAGAACTCTTTGTTGTCCCCGCTCAGCTGTAATTCTGCCTTTTCTACCTTCATTGCCATGACAGGGCCCTaGGCTGGAGTCACTGGCTGG +
Preference number: 4 (lower is better)
Translates to: KNSLLSPLSCNSAFSTFIAMTGP*AGVTGW
Trigger: CCAGCCAGTGACTCCAGCTCAGGGCCCTGTCATGGC...AATGAAGGTAGAAAAGGCAGAATTACAGCTGAGCGGGGACAACAAAGAGTTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR TCA 90 bp AGTCCTCTTCCAGTGCTTCTAGGAAGTACGGCAAAAAGAATGGTGTTTGCTGTGTCACTGGAAGAGCCATaGCAGGGCCCTGAGCTGGAG +
Preference number: 4 (lower is better)
Translates to: SPLPVLLGSTAKRMVFAVSLEEP*QGPELE
Trigger: CTCCAGCTCAGGGCCCTGTCATGGCTCTTCCAGTGA...CACAGCAAACACCATTCTTTTTGCCGTACTTCCTAGAAGCACTGGAAGAGGACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR TCA 90 bp AAAGCTGGTGTTCAGAGCTCACCCAAGGAGGGAGGTGATAAGGTGTCATGCGTTGATCTGGTGACTTGCTaGTCAGGAGAAGGTGGCTCT +
Preference number: 4 (lower is better)
Translates to: KAGVQSSPKEGGDKVSCVDLVTC*SGEGGS
Trigger: AGAGCCACCTTCTCCTGATCAGCAAGTCACCAGATC...AACGCATGACACCTTATCACCTCCCTCCTTGGGTGAGCTCTGAACACCAGCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR TCA 90 bp AGCAGCTGGTTGCCTGGCTGGACATGGATTTGCTGCACTGCAGATGTTTTCTGCCTGAGTTGGATCTGGTaGCTTGCTGATCAGGAGAAG +
Preference number: 4 (lower is better)
Translates to: SSWLPGWTWICCTADVFCLSWIW*LADQEK
Trigger: CTTCTCCTGATCAGCAAGTCACCAGATCCAACTCAG...GCAGAAAACATCTGCAGTGCAGCAAATCCATGTCCAGCCAGGCAACCAGCTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR TCA 90 bp ACCAAGGCTGCTGTACCCACCTCAGGGACAGAACTCCACACTATAGTGGGAAAGCTGAGTTGGATCTGGTaGCTTGCTGATCAGGAGAAG +
Preference number: 4 (lower is better)
Translates to: TKAAVPTSGTELHTIVGKLSWIW*LADQEK
Trigger: CTTCTCCTGATCAGCAAGTCACCAGATCCAACTCAG...CTTTCCCACTATAGTGTGGAGTTCTGTCCCTGAGGTGGGTACAGCAGCCTTGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR TCA 90 bp AAACTTTTCCCAGAGAAGAACTCTTTGTTGTCCCCGCTCAGCTGTAATTCTGCCCCCCGAAGGGGCTGCTaGGTTGGATCTGGTGACTTG +
Preference number: 4 (lower is better)
Translates to: KLFPEKNSLLSPLSCNSAPRRGC*VGSGDL
Trigger: CAAGTCACCAGATCCAACTCAGCAGCCCCTTCGGGG...GGCAGAATTACAGCTGAGCGGGGACAACAAAGAGTTCTTCTCTGGGAAAAGTTT
52% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR TCA 90 bp CTTTGTTGTCCCCGCTCAGCTGTAATTCTGCCTTTTCTACCTTCATTCCATCCTCCCCGAAGGGGCTGCTaGGTTGGATCTGGTGACTTG +
Preference number: 4 (lower is better)
Translates to: LCCPRSAVILPFLPSFHPPRRGC*VGSGDL
Trigger: CAAGTCACCAGATCCAACTCAGCAGCCCCTTCGGGG...AGGATGGAATGAAGGTAGAAAAGGCAGAATTACAGCTGAGCGGGGACAACAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR TCA 90 bp AAGAACTCTTTGTTGTCCCCGCTCAGCTGTAATTCTGCCTTTTCTACCTTCATTCTCGAGTTCCTCCTCTaGGCCAGGCTGGGCCGACAG +
Preference number: 4 (lower is better)
Translates to: KNSLLSPLSCNSAFSTFILEFLL*ARLGRQ
Trigger: CTGTCGGCCCAGCCTGGCTCAGAGGAGGAACTCGAG...AATGAAGGTAGAAAAGGCAGAATTACAGCTGAGCGGGGACAACAAAGAGTTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR TCA 90 bp AGCAGCTGGTTGCCTGGCTGGACATGGATTTGCTGCACTGCAGATGTTTTCTGCACCTCTCTGGGACTCTaGGACAGGAAATCTTCAAGG +
Preference number: 4 (lower is better)
Translates to: SSWLPGWTWICCTADVFCTSLGL*DRKSSR
Trigger: CCTTGAAGATTTCCTGTCTCAGAGTCCCAGAGAGGT...GCAGAAAACATCTGCAGTGCAGCAAATCCATGTCCAGCCAGGCAACCAGCTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR TCA 90 bp GGTGATAAGGTGTCATGCGTTCTGCTGAACCCACTGGCTGGTATGAACATGAGGAAATGGGATAATGCCTaGGGGGCCAAGAGTGGTCAG +
Preference number: 4 (lower is better)
Translates to: GDKVSCVLLNPLAGMNMRKWDNA*GAKSGQ
Trigger: CTGACCACTCTTGGCCCCTCAGGCATTATCCCATTT...CCTCATGTTCATACCAGCCAGTGGGTTCAGCAGAACGCATGACACCTTATCACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR TCA 90 bp AAAGCTGGTGTTCAGAGCTCACCCAAGGAGGGAGGTGATAAGGTGTCATGCGTTAAATGGGATAATGCCTaGGGGGCCAAGAGTGGTCAG +
Preference number: 4 (lower is better)
Translates to: KAGVQSSPKEGGDKVSCVKWDNA*GAKSGQ
Trigger: CTGACCACTCTTGGCCCCTCAGGCATTATCCCATTT...AACGCATGACACCTTATCACCTCCCTCCTTGGGTGAGCTCTGAACACCAGCTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR TCA 90 bp TGCCCTCAAAAACTCAGCCTTCAAGGGATCCAGCCCACACACGCCACAGGCAGCAAATGCCGAGCACTTTaGTTTCCCATGAGATGCTTT +
Preference number: 4 (lower is better)
Translates to: CPQKLSLQGIQPTHATGSKCRAL*FPMRCF
Trigger: AAAGCATCTCATGGGAAATCAAAGTGCTCGGCATTT...GCTGCCTGTGGCGTGTGTGGGCTGGATCCCTTGAAGGCTGAGTTTTTGAGGGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000584437.5
CDS-3UTR GCA 90 bp CAGATGTTTTCTGCAGACAAGGTCTGGAGCTGGAGCAGGAAACGGCACCCTCTCTGCAACCAAACCAAGTaGCCCATACTACAGGTAGGT +
Preference number: 4 (lower is better)
Translates to: QMFSADKVWSWSRKRHPLCNQTK*PILQVG
Trigger: ACCTACCTGTAGTATGGGGCACTTGGTTTGGTTGCA...GAGAGGGTGCCGTTTCCTGCTCCAGCTCCAGACCTTGTCTGCAGAAAACATCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000584437.5
CDS-3UTR GCA 90 bp AGAACTCTTTGTTGTCCCCGCTCAGCTGTAATTCTGCCTTTTCTACCTTCATTCGTTGCCAGGCACTGTTaGGCTGTCGGGCCCACTGGA +
Preference number: 4 (lower is better)
Translates to: RTLCCPRSAVILPFLPSFVARHC*AVGPTG
Trigger: TCCAGTGGGCCCGACAGCGCAACAGTGCCTGGCAAC...GAATGAAGGTAGAAAAGGCAGAATTACAGCTGAGCGGGGACAACAAAGAGTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407977.7
CDS-3UTR GCA 90 bp ACTGAGGGAAAAAGGTTCCCAGGTGGGGTCCTCTGCCCACTTTGCCACCACATTTCAGCCCACATCTGCTaGAGGTATGTCATTTTCTCC +
Preference number: 4 (lower is better)
Translates to: TEGKRFPGGVLCPLCHHISAHIC*RYVIFS
Trigger: GGAGAAAATGACATACCTGCAGCAGATGTGGGCTGA...AATGTGGTGGCAAAGTGGGCAGAGGACCCCACCTGGGAACCTTTTTCCCTCAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000407977.7
ENST00000584437.5
CDS-3UTR GCA 90 bp AGAACTCTTTGTTGTCCCCGCTCAGCTGTAATTCTGCCTTTTCTACCTTCATTCAGCGGCTGCTGCAGCTaGTCAGCAGCAGCTCGATCC +
Preference number: 4 (lower is better)
Translates to: RTLCCPRSAVILPFLPSFSGCCS*SAAARS
Trigger: GGATCGAGCTGCTGCTGAGCAGCTGCAGCAGCCGCT...GAATGAAGGTAGAAAAGGCAGAATTACAGCTGAGCGGGGACAACAAAGAGTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR GCA 90 bp TCCTTCCTCTGCCCAGATAAAGTCCAGCAGAAATTCCTCCTTTCTACCTCTCTGATGACCCGTAGCTCCTaGCCCTCAGAGAACTCCTCC +
Preference number: 4 (lower is better)
Translates to: SFLCPDKVQQKFLLSTSLMTRSS*PSENSS
Trigger: GGAGGAGTTCTCTGAGGGGCAGGAGCTACGGGTCAT...CAGAGAGGTAGAAAGGAGGAATTTCTGCTGGACTTTATCTGGGCAGAGGAAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR GCA 90 bp AGTCCTCTTCCAGTGCTTCTAGGAAGTACGGCAAAAAGAATGGTGTTTGCTGTGTGGGCATGGCCGGGATaGTGGCGAATGAGGTGGAGT +
Preference number: 4 (lower is better)
Translates to: SPLPVLLGSTAKRMVFAVWAWPG*WRMRWS
Trigger: ACTCCACCTCATTCGCCAGCATCCCGGCCATGCCCA...CACAGCAAACACCATTCTTTTTGCCGTACTTCCTAGAAGCACTGGAAGAGGACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR GCA 90 bp CTTTGTTGTCCCCGCTCAGCTGTAATTCTGCCTTTTCTACCTTCATTCCATCCTTTTCTCCAGATCCACTaGTGTCAGGGGGCCTGGCCC +
Preference number: 4 (lower is better)
Translates to: LCCPRSAVILPFLPSFHPFLQIH*CQGAWP
Trigger: GGGCCAGGCCCCCTGACAGCAGTGGATCTGGAGAAA...AGGATGGAATGAAGGTAGAAAAGGCAGAATTACAGCTGAGCGGGGACAACAAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR GCA 90 bp GGAGCTGGGCCTCTGGGCTGTCCAAACCCAAGGGTCACACTTTGCTTTTCCTTTACCCACTGCGTTCTGTaGAATAGCTTTCTCCAGATC +
Preference number: 4 (lower is better)
Translates to: GAGPLGCPNPRVTLCFSFTHCVL*NSFLQI
Trigger: GATCTGGAGAAAGCTATTGCACAGAACGCAGTGGGT...AAAGGAAAAGCAAAGTGTGACCCTTGGGTTTGGACAGCCCAGAGGCCCAGCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR GCA 90 bp AGCAGCTGGTTGCCTGGCTGGACATGGATTTGCTGCACTGCAGATGTTTTCTGCCTGCCAGGTACCCACTaGGTTCTGTGCAATAGCTTT +
Preference number: 4 (lower is better)
Translates to: SSWLPGWTWICCTADVFCLPGTH*VLCNSF
Trigger: AAAGCTATTGCACAGAACGCAGTGGGTACCTGGCAG...GCAGAAAACATCTGCAGTGCAGCAAATCCATGTCCAGCCAGGCAACCAGCTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR GCA 90 bp CCTGGCTGGACATGGATTTGCTGCACTGCAGATGTTTTCTGCAGACAAGGTCTGGGGGGTCAAAGTCACTaGTTAGGGAGCTGCAGAAAG +
Preference number: 4 (lower is better)
Translates to: PGWTWICCTADVFCRQGLGGQSH*LGSCRK
Trigger: CTTTCTGCAGCTCCCTAAGCAGTGACTTTGACCCCC...CAGACCTTGTCTGCAGAAAACATCTGCAGTGCAGCAAATCCATGTCCAGCCAGG
52% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR GCA 90 bp AAACTTTTCCCAGAGAAGAACTCTTTGTTGTCCCCGCTCAGCTGTAATTCTGCCTGGTACTGGGGCAGATaGTGGAGGCGTCAACTGGGC +
Preference number: 4 (lower is better)
Translates to: KLFPEKNSLLSPLSCNSAWYWGR*WRRQLG
Trigger: GCCCAGTTGACGCCTCCAGCATCTGCCCCAGTACCA...GGCAGAATTACAGCTGAGCGGGGACAACAAAGAGTTCTTCTCTGGGAAAAGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR GCA 90 bp GGTGATAAGGTGTCATGCGTTCTGCTGAACCCACTGGCTGGTATGAACATGAGGTGGGGACCAAGGATATaGCACACTGGGGGTGTAATG +
Preference number: 4 (lower is better)
Translates to: GDKVSCVLLNPLAGMNMRWGPRI*HTGGVM
Trigger: CATTACACCCCCAGTGTGGCATATCCTTGGTCCCCA...CCTCATGTTCATACCAGCCAGTGGGTTCAGCAGAACGCATGACACCTTATCACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR GCA 90 bp TCCTTCCTCTGCCCAGATAAAGTCCAGCAGAAATTCCTCCTTTCTACCTCTCTGGCATGGCCTGCCCTCTaGGGTGTCAGAACTCCATTC +
Preference number: 4 (lower is better)
Translates to: SFLCPDKVQQKFLLSTSLAWPAL*GVRTPF
Trigger: GAATGGAGTTCTGACACCGCAGAGGGCAGGCCATGC...CAGAGAGGTAGAAAGGAGGAATTTCTGCTGGACTTTATCTGGGCAGAGGAAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR GCA 90 bp TCCTTCCTCTGCCCAGATAAAGTCCAGCAGAAATTCCTCCTTTCTACCTCTCTGGATAAGGGCATGGCCTaGCCTCTGCGGTGTCAGAAC +
Preference number: 4 (lower is better)
Translates to: SFLCPDKVQQKFLLSTSLDKGMA*PLRCQN
Trigger: GTTCTGACACCGCAGAGGGCAGGCCATGCCCTTATC...CAGAGAGGTAGAAAGGAGGAATTTCTGCTGGACTTTATCTGGGCAGAGGAAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR GCA 90 bp CAGATGTTTTCTGCAGACAAGGTCTGGAGCTGGAGCAGGAAACGGCACCCTCTCGGCTGGACATGGATTTaGTGCACTGCAGATGTTTTC +
Preference number: 4 (lower is better)
Translates to: QMFSADKVWSWSRKRHPLGWTWI*CTADVF
Trigger: GAAAACATCTGCAGTGCAGCAAATCCATGTCCAGCC...GAGAGGGTGCCGTTTCCTGCTCCAGCTCCAGACCTTGTCTGCAGAAAACATCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR GCA 90 bp ACTGAGGGAAAAAGGTTCCCAGGTGGGGTCCTCTGCCCACTTTGCCACCACATTGGCTGGACATGGATTTaGTGCACTGCAGATGTTTTC +
Preference number: 4 (lower is better)
Translates to: TEGKRFPGGVLCPLCHHIGWTWI*CTADVF
Trigger: GAAAACATCTGCAGTGCAGCAAATCCATGTCCAGCC...AATGTGGTGGCAAAGTGGGCAGAGGACCCCACCTGGGAACCTTTTTCCCTCAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR GCA 90 bp TGGCTGGACATGGATTTGCTGCACTGCAGATGTTTTCTGCAGACAAGGTCTGGACAGGCAGCAGCTGGTTaGCTGGCTGGACATGGATTT +
Preference number: 4 (lower is better)
Translates to: WLDMDLLHCRCFLQTRSGQAAAG*LAGHGF
Trigger: AAATCCATGTCCAGCCAGGCAACCAGCTGCTGCCTG...TCCAGACCTTGTCTGCAGAAAACATCTGCAGTGCAGCAAATCCATGTCCAGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR GCA 90 bp AGCAGCTGGTTGCCTGGCTGGACATGGATTTGCTGCACTGCAGATGTTTTCTGCCTCAGGGCTCACCTATaGTACTGGTCCTTTTGGCAA +
Preference number: 4 (lower is better)
Translates to: SSWLPGWTWICCTADVFCLRAHL*YWSFWQ
Trigger: TTGCCAAAAGGACCAGTAGCATAGGTGAGCCCTGAG...GCAGAAAACATCTGCAGTGCAGCAAATCCATGTCCAGCCAGGCAACCAGCTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR GCA 90 bp ACTGAGGGAAAAAGGTTCCCAGGTGGGGTCCTCTGCCCACTTTGCCACCACATTCCAAGGGTCACACTTTaGTTTTCCTTTGTTGTCCCC +
Preference number: 4 (lower is better)
Translates to: TEGKRFPGGVLCPLCHHIPRVTL*FSFVVP
Trigger: GGGGACAACAAAGGAAAAGCAAAGTGTGACCCTTGG...AATGTGGTGGCAAAGTGGGCAGAGGACCCCACCTGGGAACCTTTTTCCCTCAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR GCA 90 bp AAGGTGTCATGCGTTCTGCTGAACCCACTGGCTGGTATGAACATGAGGCTTGGGGTCCTCTGCCCACTTTaGCACCACATTCACATTCCA +
Preference number: 4 (lower is better)
Translates to: KVSCVLLNPLAGMNMRLGVLCPL*HHIHIP
Trigger: TGGAATGTGAATGTGGTGGCAAAGTGGGCAGAGGAC...CCCAAGCCTCATGTTCATACCAGCCAGTGGGTTCAGCAGAACGCATGACACCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp AAACTTTTCCCAGAGAAGAACTCTTTGTTGTCCCCGCTCAGCTGTAATTCTGCCGCAGCCAGCTGCAGCTaGTGGCCACCACTCATGCTA +
Preference number: 4 (lower is better)
Translates to: KLFPEKNSLLSPLSCNSAAASCS*WPPLML
Trigger: TAGCATGAGTGGTGGCCACCAGCTGCAGCTGGCTGC...GGCAGAATTACAGCTGAGCGGGGACAACAAAGAGTTCTTCTCTGGGAAAAGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp CAGATGTTTTCTGCAGACAAGGTCTGGAGCTGGAGCAGGAAACGGCACCCTCTCCACAGGTACAGCGGGTaGGACTGCATTAATTTTCCT +
Preference number: 4 (lower is better)
Translates to: QMFSADKVWSWSRKRHPLHRYSG*DCINFP
Trigger: AGGAAAATTAATGCAGTCCCACCCGCTGTACCTGTG...GAGAGGGTGCCGTTTCCTGCTCCAGCTCCAGACCTTGTCTGCAGAAAACATCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000584437.5
CDS-3UTR CCA 90 bp GGAGCTGGGCCTCTGGGCTGTCCAAACCCAAGGGTCACACTTTGCTTTTCCTTTTTACGATGGAACTCATaGAGGCAGGAAATGACCCGT +
Preference number: 4 (lower is better)
Translates to: GAGPLGCPNPRVTLCFSFLRWNS*RQEMTR
Trigger: ACGGGTCATTTCCTGCCTCCATGAGTTCCATCGTAA...AAAGGAAAAGCAAAGTGTGACCCTTGGGTTTGGACAGCCCAGAGGCCCAGCTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp CTTGTCCACTCAGTGAGGCCAGACTTGTGCTCTAATCCACTCTCCTGTGGGTCCTTACGATGGAACTCATaGAGGCAGGAAATGACCCGT +
Preference number: 4 (lower is better)
Translates to: LVHSVRPDLCSNPLSCGSLRWNS*RQEMTR
Trigger: ACGGGTCATTTCCTGCCTCCATGAGTTCCATCGTAA...GGACCCACAGGAGAGTGGATTAGAGCACAAGTCTGGCCTCACTGAGTGGACAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp CAGATGTTTTCTGCAGACAAGGTCTGGAGCTGGAGCAGGAAACGGCACCCTCTCTCCACACAGTTACGATaGAACTCATGGAGGCAGGAA +
Preference number: 4 (lower is better)
Translates to: QMFSADKVWSWSRKRHPLSTQLR*NSWRQE
Trigger: TTCCTGCCTCCATGAGTTCCATCGTAACTGTGTGGA...GAGAGGGTGCCGTTTCCTGCTCCAGCTCCAGACCTTGTCTGCAGAAAACATCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp AAAGCTGGTGTTCAGAGCTCACCCAAGGAGGGAGGTGATAAGGTGTCATGCGTTGAGGGTCCCAGGGACTaGGAAAATGAATCTCCCTCT +
Preference number: 4 (lower is better)
Translates to: KAGVQSSPKEGGDKVSCVEGPRD*ENESPS
Trigger: AGAGGGAGATTCATTTTCCCAGTCCCTGGGACCCTC...AACGCATGACACCTTATCACCTCCCTCCTTGGGTGAGCTCTGAACACCAGCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp CTTGTCCACTCAGTGAGGCCAGACTTGTGCTCTAATCCACTCTCCTGTGGGTCCGTGGAGTCTTCGACCTaGTTCTTGGTAAGATCGAGA +
Preference number: 4 (lower is better)
Translates to: LVHSVRPDLCSNPLSCGSVESST*FLVRSR
Trigger: TCTCGATCTTACCAAGAACCAGGTCGAAGACTCCAC...GGACCCACAGGAGAGTGGATTAGAGCACAAGTCTGGCCTCACTGAGTGGACAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp TCCTTCCTCTGCCCAGATAAAGTCCAGCAGAAATTCCTCCTTTCTACCTCTCTGGCATGGCCGGGATGCTaGCGAATGAGGTGGAGTCTT +
Preference number: 4 (lower is better)
Translates to: SFLCPDKVQQKFLLSTSLAWPGC*RMRWSL
Trigger: AAGACTCCACCTCATTCGCCAGCATCCCGGCCATGC...CAGAGAGGTAGAAAGGAGGAATTTCTGCTGGACTTTATCTGGGCAGAGGAAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp AAGAACTCTTTGTTGTCCCCGCTCAGCTGTAATTCTGCCTTTTCTACCTTCATTGCCTGGCTCCTGGGATaGCAGGAAGGGACCAGGTCG +
Preference number: 4 (lower is better)
Translates to: KNSLLSPLSCNSAFSTFIAWLLG*QEGTRS
Trigger: CGACCTGGTCCCTTCCTGCCATCCCAGGAGCCAGGC...AATGAAGGTAGAAAAGGCAGAATTACAGCTGAGCGGGGACAACAAAGAGTTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp GAGCAGCACCTTTGTAACACCTGGCTACCCATAGCTAGCTTTCTGCCCTCAAAAGGTAGTGGACATGGCTaGAAACCTGGGTTTCCCCTG +
Preference number: 4 (lower is better)
Translates to: EQHLCNTWLPIASFLPSKGSGHG*KPGFPL
Trigger: CAGGGGAAACCCAGGTTTCCAGCCATGTCCACTACC...TTTTGAGGGCAGAAAGCTAGCTATGGGTAGCCAGGTGTTACAAAGGTGCTGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp ACTGAGGGAAAAAGGTTCCCAGGTGGGGTCCTCTGCCCACTTTGCCACCACATTAAAAATCTGGCAAGCTaGGTGCACAGTTGCATCCTG +
Preference number: 4 (lower is better)
Translates to: TEGKRFPGGVLCPLCHHIKNLAS*VHSCIL
Trigger: CAGGATGCAACTGTGCACCCAGCTTGCCAGATTTTT...AATGTGGTGGCAAAGTGGGCAGAGGACCCCACCTGGGAACCTTTTTCCCTCAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp AAACTTTTCCCAGAGAAGAACTCTTTGTTGTCCCCGCTCAGCTGTAATTCTGCCTGTGGTTCCAGGGGCTaGCGAGGAGTCAGGCACAAC +
Preference number: 4 (lower is better)
Translates to: KLFPEKNSLLSPLSCNSACGSRG*RGVRHN
Trigger: GTTGTGCCTGACTCCTCGCCAGCCCCTGGAACCACA...GGCAGAATTACAGCTGAGCGGGGACAACAAAGAGTTCTTCTCTGGGAAAAGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp AAAAGGTTCCCAGGTGGGGTCCTCTGCCCACTTTGCCACCACATTCACATTCCATTGCCTGGCTGGACATaGATTTGCTGCACTGCAGAT +
Preference number: 4 (lower is better)
Translates to: KRFPGGVLCPLCHHIHIPLPGWT*ICCTAD
Trigger: ATCTGCAGTGCAGCAAATCCATGTCCAGCCAGGCAA...TGGAATGTGAATGTGGTGGCAAAGTGGGCAGAGGACCCCACCTGGGAACCTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp CTTGTCCACTCAGTGAGGCCAGACTTGTGCTCTAATCCACTCTCCTGTGGGTCCAAACCAAGTAGGGGTTaGAGAAGGAGCAGCACCTTT +
Preference number: 4 (lower is better)
Translates to: LVHSVRPDLCSNPLSCGSKPSRG*RRSSTF
Trigger: AAAGGTGCTGCTCCTTCTCCAACCCCTACTTGGTTT...GGACCCACAGGAGAGTGGATTAGAGCACAAGTCTGGCCTCACTGAGTGGACAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp AAAGCTGGTGTTCAGAGCTCACCCAAGGAGGGAGGTGATAAGGTGTCATGCGTTTCTCCTGTGGGTCCCTaGCCTGTATGGCTTATACTG +
Preference number: 4 (lower is better)
Translates to: KAGVQSSPKEGGDKVSCVSPVGP*PVWLIL
Trigger: CAGTATAAGCCATACAGGCCAGGGACCCACAGGAGA...AACGCATGACACCTTATCACCTCCCTCCTTGGGTGAGCTCTGAACACCAGCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR TCA 90 bp ACTGAGGGAAAAAGGTTCCCAGGTGGGGTCCTCTGCCCACTTTGCCACCACATTCTCCCATCTTCACTGTaGCTAGTAAAGATCTCACCA +
Preference number: 4 (lower is better)
Translates to: TEGKRFPGGVLCPLCHHILPSSL*LVKISP
Trigger: TGGTGAGATCTTTACTAGTCACAGTGAAGATGGGAG...AATGTGGTGGCAAAGTGGGCAGAGGACCCCACCTGGGAACCTTTTTCCCTCAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000407977.7
ENST00000584437.5
CDS-3UTR TCA 90 bp GAGCAGCACCTTTGTAACACCTGGCTACCCATAGCTAGCTTTCTGCCCTCAAAAGATCTGGTGACTTGCTaGTCAGGAGAAGGTGGCTCT +
Preference number: 4 (lower is better)
Translates to: EQHLCNTWLPIASFLPSKDLVTC*SGEGGS
Trigger: AGAGCCACCTTCTCCTGATCAGCAAGTCACCAGATC...TTTTGAGGGCAGAAAGCTAGCTATGGGTAGCCAGGTGTTACAAAGGTGCTGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR TCA 90 bp CACTGCAGATGTTTTCTGCAGACAAGGTCTGGAGCTGGAGCAGGAAACGGCACCTGGATTTTTGCAAGTTaGACAGACTGCTGGTACTGG +
Preference number: 4 (lower is better)
Translates to: HCRCFLQTRSGAGAGNGTWIFAS*TDCWYW
Trigger: CCAGTACCAGCAGTCTGTTCAACTTGCAAAAATCCA...GGTGCCGTTTCCTGCTCCAGCTCCAGACCTTGTCTGCAGAAAACATCTGCAGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR TCA 90 bp TGGCTGGACATGGATTTGCTGCACTGCAGATGTTTTCTGCAGACAAGGTCTGGACTCTTGTCCACTCAGTaGGGCCAGACTTGTGCTCTA +
Preference number: 4 (lower is better)
Translates to: WLDMDLLHCRCFLQTRSGLLSTQ*GQTCAL
Trigger: TAGAGCACAAGTCTGGCCTCACTGAGTGGACAAGAG...TCCAGACCTTGTCTGCAGAAAACATCTGCAGTGCAGCAAATCCATGTCCAGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR TCA 90 bp GGAGCTGGGCCTCTGGGCTGTCCAAACCCAAGGGTCACACTTTGCTTTTCCTTTTTTCAGGCCACACGTTaGTGTCCAAAGATGCTACAA +
Preference number: 4 (lower is better)
Translates to: GAGPLGCPNPRVTLCFSFFQATR*CPKMLQ
Trigger: TTGTAGCATCTTTGGACATCAACGTGTGGCCTGAAA...AAAGGAAAAGCAAAGTGTGACCCTTGGGTTTGGACAGCCCAGAGGCCCAGCTCC
51% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000584437.5
CDS-3UTR GCA 90 bp ACCAAGGCTGCTGTACCCACCTCAGGGACAGAACTCCACACTATAGTGGGAAAGCTCCGGGATGAGAGATaGTGTCCCCTAGAACTAAAT +
Preference number: 4 (lower is better)
Translates to: TKAAVPTSGTELHTIVGKLRDER*CPLELN
Trigger: ATTTAGTTCTAGGGGACAGCATCTCTCATCCCGGAG...CTTTCCCACTATAGTGTGGAGTTCTGTCCCTGAGGTGGGTACAGCAGCCTTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000584437.5
CDS-3UTR GCA 90 bp GAGGGAGGTGATAAGGTGTCATGCGTTCTGCTGAACCCACTGGCTGGTATGAACTGCAACCAAACCAAGTaGCCCATACTACAGGTAGGT +
Preference number: 4 (lower is better)
Translates to: EGGDKVSCVLLNPLAGMNCNQTK*PILQVG
Trigger: ACCTACCTGTAGTATGGGGCACTTGGTTTGGTTGCA...GTTCATACCAGCCAGTGGGTTCAGCAGAACGCATGACACCTTATCACCTCCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000584437.5
CDS-3UTR GCA 90 bp GGTGATAAGGTGTCATGCGTTCTGCTGAACCCACTGGCTGGTATGAACATGAGGTCCACCTTCTTACTCTaGAACCAAACCAAGTGCCCC +
Preference number: 4 (lower is better)
Translates to: GDKVSCVLLNPLAGMNMRSTFLL*NQTKCP
Trigger: GGGGCACTTGGTTTGGTTGCAGAGTAAGAAGGTGGA...CCTCATGTTCATACCAGCCAGTGGGTTCAGCAGAACGCATGACACCTTATCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000584437.5
CDS-3UTR GCA 90 bp CAGATGTTTTCTGCAGACAAGGTCTGGAGCTGGAGCAGGAAACGGCACCCTCTCCATTGCTCTTCCATATaGATCAAGTTGCCAGGCACT +
Preference number: 4 (lower is better)
Translates to: QMFSADKVWSWSRKRHPLHCSSI*IKLPGT
Trigger: AGTGCCTGGCAACTTGATGCATATGGAAGAGCAATG...GAGAGGGTGCCGTTTCCTGCTCCAGCTCCAGACCTTGTCTGCAGAAAACATCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407977.7
ENST00000584437.5
CDS-3UTR GCA 90 bp GAGGGAGGTGATAAGGTGTCATGCGTTCTGCTGAACCCACTGGCTGGTATGAACTCAGCCCACATCTGCTaGAGGTATGTCATTTTCTCC +
Preference number: 4 (lower is better)
Translates to: EGGDKVSCVLLNPLAGMNSAHIC*RYVIFS
Trigger: GGAGAAAATGACATACCTGCAGCAGATGTGGGCTGA...GTTCATACCAGCCAGTGGGTTCAGCAGAACGCATGACACCTTATCACCTCCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407977.7
ENST00000584437.5
CDS-3UTR GCA 90 bp AGGCAGCAGCTGGTTGCCTGGCTGGACATGGATTTGCTGCACTGCAGATGTTTTACTCATGCTACCAGCTaGAGCAATGCACTTCAACCA +
Preference number: 4 (lower is better)
Translates to: RQQLVAWLDMDLLHCRCFTHATS*SNALQP
Trigger: TGGTTGAAGTGCATTGCTGCAGCTGGTAGCATGAGT...AAAACATCTGCAGTGCAGCAAATCCATGTCCAGCCAGGCAACCAGCTGCTGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR GCA 90 bp AGTCCTCTTCCAGTGCTTCTAGGAAGTACGGCAAAAAGAATGGTGTTTGCTGTGGGTGGCCACCACTCATaGTACCAGCTGCAGCAATGC +
Preference number: 4 (lower is better)
Translates to: SPLPVLLGSTAKRMVFAVGGHHS*YQLQQC
Trigger: GCATTGCTGCAGCTGGTAGCATGAGTGGTGGCCACC...CACAGCAAACACCATTCTTTTTGCCGTACTTCCTAGAAGCACTGGAAGAGGACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR GCA 90 bp CTTTGTTGTCCCCGCTCAGCTGTAATTCTGCCTTTTCTACCTTCATTCCATCCTTGTGCGTCCAAAGCCTaGCTGCAGGGTAGCCATCAG +
Preference number: 4 (lower is better)
Translates to: LCCPRSAVILPFLPSFHPCASKA*LQGSHQ
Trigger: CTGATGGCTACCCTGCAGGCAGGCTTTGGACGCACA...AGGATGGAATGAAGGTAGAAAAGGCAGAATTACAGCTGAGCGGGGACAACAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR GCA 90 bp AAACTTTTCCCAGAGAAGAACTCTTTGTTGTCCCCGCTCAGCTGTAATTCTGCCCCAGTACCAGTCCTGTaGGTCCAAAGCCTGCCTGCA +
Preference number: 4 (lower is better)
Translates to: KLFPEKNSLLSPLSCNSAPVPVL*VQSLPA
Trigger: TGCAGGCAGGCTTTGGACGCACAGGACTGGTACTGG...GGCAGAATTACAGCTGAGCGGGGACAACAAAGAGTTCTTCTCTGGGAAAAGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR GCA 90 bp AAGAACTCTTTGTTGTCCCCGCTCAGCTGTAATTCTGCCTTTTCTACCTTCATTAGCGGCTGCTGCAGCTaGTCAGCAGCAGCTCGATCC +
Preference number: 4 (lower is better)
Translates to: KNSLLSPLSCNSAFSTFISGCCS*SAAARS
Trigger: GGATCGAGCTGCTGCTGAGCAGCTGCAGCAGCCGCT...AATGAAGGTAGAAAAGGCAGAATTACAGCTGAGCGGGGACAACAAAGAGTTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR GCA 90 bp CTTTGTTGTCCCCGCTCAGCTGTAATTCTGCCTTTTCTACCTTCATTCCATCCTATGACCCGTAGCTCCTaGCCCTCAGAGAACTCCTCC +
Preference number: 4 (lower is better)
Translates to: LCCPRSAVILPFLPSFHPMTRSS*PSENSS
Trigger: GGAGGAGTTCTCTGAGGGGCAGGAGCTACGGGTCAT...AGGATGGAATGAAGGTAGAAAAGGCAGAATTACAGCTGAGCGGGGACAACAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR GCA 90 bp AGGCAGCAGCTGGTTGCCTGGCTGGACATGGATTTGCTGCACTGCAGATGTTTTACCCACTGCGTTCTGTaGAATAGCTTTCTCCAGATC +
Preference number: 4 (lower is better)
Translates to: RQQLVAWLDMDLLHCRCFTHCVL*NSFLQI
Trigger: GATCTGGAGAAAGCTATTGCACAGAACGCAGTGGGT...AAAACATCTGCAGTGCAGCAAATCCATGTCCAGCCAGGCAACCAGCTGCTGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR GCA 90 bp GAGGGAGGTGATAAGGTGTCATGCGTTCTGCTGAACCCACTGGCTGGTATGAACACCCACTGCGTTCTGTaGAATAGCTTTCTCCAGATC +
Preference number: 4 (lower is better)
Translates to: EGGDKVSCVLLNPLAGMNTHCVL*NSFLQI
Trigger: GATCTGGAGAAAGCTATTGCACAGAACGCAGTGGGT...GTTCATACCAGCCAGTGGGTTCAGCAGAACGCATGACACCTTATCACCTCCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR GCA 90 bp AAAGCTGGTGTTCAGAGCTCACCCAAGGAGGGAGGTGATAAGGTGTCATGCGTTCTGCCAGGTACCCACTaGGTTCTGTGCAATAGCTTT +
Preference number: 4 (lower is better)
Translates to: KAGVQSSPKEGGDKVSCVLPGTH*VLCNSF
Trigger: AAAGCTATTGCACAGAACGCAGTGGGTACCTGGCAG...AACGCATGACACCTTATCACCTCCCTCCTTGGGTGAGCTCTGAACACCAGCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR GCA 90 bp AAGAACTCTTTGTTGTCCCCGCTCAGCTGTAATTCTGCCTTTTCTACCTTCATTCTGGGCCAGGCTTCCTaGCATGCCACTGGAACCGCT +
Preference number: 4 (lower is better)
Translates to: KNSLLSPLSCNSAFSTFILGQAS*HATGTA
Trigger: AGCGGTTCCAGTGGCATGGCAGGAAGCCTGGCCCAG...AATGAAGGTAGAAAAGGCAGAATTACAGCTGAGCGGGGACAACAAAGAGTTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR GCA 90 bp AAGAACTCTTTGTTGTCCCCGCTCAGCTGTAATTCTGCCTTTTCTACCTTCATTAGCTGGGTGCACAGTTaGATCCTGGGGCCGAGAGCC +
Preference number: 4 (lower is better)
Translates to: KNSLLSPLSCNSAFSTFISWVHS*ILGPRA
Trigger: GGCTCTCGGCCCCAGGATGCAACTGTGCACCCAGCT...AATGAAGGTAGAAAAGGCAGAATTACAGCTGAGCGGGGACAACAAAGAGTTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR GCA 90 bp AAACTTTTCCCAGAGAAGAACTCTTTGTTGTCCCCGCTCAGCTGTAATTCTGCCGCATGGCCTGCCCTCTaGGGTGTCAGAACTCCATTC +
Preference number: 4 (lower is better)
Translates to: KLFPEKNSLLSPLSCNSAAWPAL*GVRTPF
Trigger: GAATGGAGTTCTGACACCGCAGAGGGCAGGCCATGC...GGCAGAATTACAGCTGAGCGGGGACAACAAAGAGTTCTTCTCTGGGAAAAGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR GCA 90 bp AGTCCTCTTCCAGTGCTTCTAGGAAGTACGGCAAAAAGAATGGTGTTTGCTGTGGATAAGGGCATGGCCTaGCCTCTGCGGTGTCAGAAC +
Preference number: 4 (lower is better)
Translates to: SPLPVLLGSTAKRMVFAVDKGMA*PLRCQN
Trigger: GTTCTGACACCGCAGAGGGCAGGCCATGCCCTTATC...CACAGCAAACACCATTCTTTTTGCCGTACTTCCTAGAAGCACTGGAAGAGGACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR GCA 90 bp CTTTGTTGTCCCCGCTCAGCTGTAATTCTGCCTTTTCTACCTTCATTCCATCCTAGGAGCAGGACTCTGTaGCAGGTAGGGCCCAAACAC +
Preference number: 4 (lower is better)
Translates to: LCCPRSAVILPFLPSFHPRSRTL*QVGPKH
Trigger: GTGTTTGGGCCCTACCTGGCACAGAGTCCTGCTCCT...AGGATGGAATGAAGGTAGAAAAGGCAGAATTACAGCTGAGCGGGGACAACAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR GCA 90 bp AGGCAGCAGCTGGTTGCCTGGCTGGACATGGATTTGCTGCACTGCAGATGTTTTACTGCAGATGTTTTCTaGAGACAAGGTCTGGAGCTG +
Preference number: 4 (lower is better)
Translates to: RQQLVAWLDMDLLHCRCFTADVF*RQGLEL
Trigger: CAGCTCCAGACCTTGTCTGCAGAAAACATCTGCAGT...AAAACATCTGCAGTGCAGCAAATCCATGTCCAGCCAGGCAACCAGCTGCTGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR GCA 90 bp GAGGGAGGTGATAAGGTGTCATGCGTTCTGCTGAACCCACTGGCTGGTATGAACACTGCAGATGTTTTCTaGAGACAAGGTCTGGAGCTG +
Preference number: 4 (lower is better)
Translates to: EGGDKVSCVLLNPLAGMNTADVF*RQGLEL
Trigger: CAGCTCCAGACCTTGTCTGCAGAAAACATCTGCAGT...GTTCATACCAGCCAGTGGGTTCAGCAGAACGCATGACACCTTATCACCTCCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR GCA 90 bp AGGCAGCAGCTGGTTGCCTGGCTGGACATGGATTTGCTGCACTGCAGATGTTTTGGCTGGACATGGATTTaGTGCACTGCAGATGTTTTC +
Preference number: 4 (lower is better)
Translates to: RQQLVAWLDMDLLHCRCFGWTWI*CTADVF
Trigger: GAAAACATCTGCAGTGCAGCAAATCCATGTCCAGCC...AAAACATCTGCAGTGCAGCAAATCCATGTCCAGCCAGGCAACCAGCTGCTGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR GCA 90 bp GGTGATAAGGTGTCATGCGTTCTGCTGAACCCACTGGCTGGTATGAACATGAGGGGTGATAAGGTGTCATaGGTTCTGCTGAACCCACTG +
Preference number: 4 (lower is better)
Translates to: GDKVSCVLLNPLAGMNMRGDKVS*VLLNPL
Trigger: CAGTGGGTTCAGCAGAACGCATGACACCTTATCACC...CCTCATGTTCATACCAGCCAGTGGGTTCAGCAGAACGCATGACACCTTATCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR GCA 90 bp AGTCCTCTTCCAGTGCTTCTAGGAAGTACGGCAAAAAGAATGGTGTTTGCTGTGCAAGAGTGGTCAGGCTaGCCTGGGGTGAATGTCACC +
Preference number: 4 (lower is better)
Translates to: SPLPVLLGSTAKRMVFAVQEWSG*PGVNVT
Trigger: GGTGACATTCACCCCAGGGCAGCCTGACCACTCTTG...CACAGCAAACACCATTCTTTTTGCCGTACTTCCTAGAAGCACTGGAAGAGGACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR GCA 90 bp CTTTGTTGTCCCCGCTCAGCTGTAATTCTGCCTTTTCTACCTTCATTCCATCCTCAAGAGTGGTCAGGCTaGCCTGGGGTGAATGTCACC +
Preference number: 4 (lower is better)
Translates to: LCCPRSAVILPFLPSFHPQEWSG*PGVNVT
Trigger: GGTGACATTCACCCCAGGGCAGCCTGACCACTCTTG...AGGATGGAATGAAGGTAGAAAAGGCAGAATTACAGCTGAGCGGGGACAACAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR GCA 90 bp CCTGGCTGGACATGGATTTGCTGCACTGCAGATGTTTTCTGCAGACAAGGTCTGGTCCTCTGCCCACTTTaGCACCACATTCACATTCCA +
Preference number: 4 (lower is better)
Translates to: PGWTWICCTADVFCRQGLVLCPL*HHIHIP
Trigger: TGGAATGTGAATGTGGTGGCAAAGTGGGCAGAGGAC...CAGACCTTGTCTGCAGAAAACATCTGCAGTGCAGCAAATCCATGTCCAGCCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR GCA 90 bp AAACTTTTCCCAGAGAAGAACTCTTTGTTGTCCCCGCTCAGCTGTAATTCTGCCCCAGGTGGGGTCCTCTaGCCACTTTGCCACCACATT +
Preference number: 4 (lower is better)
Translates to: KLFPEKNSLLSPLSCNSAPGGVL*PLCHHI
Trigger: AATGTGGTGGCAAAGTGGGCAGAGGACCCCACCTGG...GGCAGAATTACAGCTGAGCGGGGACAACAAAGAGTTCTTCTCTGGGAAAAGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR GCA 90 bp TCCTTCCTCTGCCCAGATAAAGTCCAGCAGAAATTCCTCCTTTCTACCTCTCTGAATCTGCAAACCTGTTaGGCTGTCGGGCCCACTGGA +
Preference number: 4 (lower is better)
Translates to: SFLCPDKVQQKFLLSTSLNLQTC*AVGPTG
Trigger: TCCAGTGGGCCCGACAGCGCAACAGGTTTGCAGATT...CAGAGAGGTAGAAAGGAGGAATTTCTGCTGGACTTTATCTGGGCAGAGGAAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584437.5
CDS-3UTR CCA 90 bp AGAACTCTTTGTTGTCCCCGCTCAGCTGTAATTCTGCCTTTTCTACCTTCATTCGCAGCCAGCTGCAGCTaGTGGCCACCACTCATGCTA +
Preference number: 4 (lower is better)
Translates to: RTLCCPRSAVILPFLPSFAASCS*WPPLML
Trigger: TAGCATGAGTGGTGGCCACCAGCTGCAGCTGGCTGC...GAATGAAGGTAGAAAAGGCAGAATTACAGCTGAGCGGGGACAACAAAGAGTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp AAAAGGTTCCCAGGTGGGGTCCTCTGCCCACTTTGCCACCACATTCACATTCCACACAGGTACAGCGGGTaGGACTGCATTAATTTTCCT +
Preference number: 4 (lower is better)
Translates to: KRFPGGVLCPLCHHIHIPHRYSG*DCINFP
Trigger: AGGAAAATTAATGCAGTCCCACCCGCTGTACCTGTG...TGGAATGTGAATGTGGTGGCAAAGTGGGCAGAGGACCCCACCTGGGAACCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000584437.5
CDS-3UTR CCA 90 bp ACTGAGGGAAAAAGGTTCCCAGGTGGGGTCCTCTGCCCACTTTGCCACCACATTCTCACATGGGCCTTTTaGTTCTTGTACACAAACTCC +
Preference number: 4 (lower is better)
Translates to: TEGKRFPGGVLCPLCHHILTWAF*FLYTNS
Trigger: GGAGTTTGTGTACAAGAACCAAAAGGCCCATGTGAG...AATGTGGTGGCAAAGTGGGCAGAGGACCCCACCTGGGAACCTTTTTCCCTCAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp CAGATGTTTTCTGCAGACAAGGTCTGGAGCTGGAGCAGGAAACGGCACCCTCTCCTCACATGGGCCTTTTaGTTCTTGTACACAAACTCC +
Preference number: 4 (lower is better)
Translates to: QMFSADKVWSWSRKRHPLLTWAF*FLYTNS
Trigger: GGAGTTTGTGTACAAGAACCAAAAGGCCCATGTGAG...GAGAGGGTGCCGTTTCCTGCTCCAGCTCCAGACCTTGTCTGCAGAAAACATCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp CAGATGTTTTCTGCAGACAAGGTCTGGAGCTGGAGCAGGAAACGGCACCCTCTCAGCTCAATCCTCACATaGGCCTTTTGGTTCTTGTAC +
Preference number: 4 (lower is better)
Translates to: QMFSADKVWSWSRKRHPLSSILT*AFWFLY
Trigger: GTACAAGAACCAAAAGGCCCATGTGAGGATTGAGCT...GAGAGGGTGCCGTTTCCTGCTCCAGCTCCAGACCTTGTCTGCAGAAAACATCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp ACTGAGGGAAAAAGGTTCCCAGGTGGGGTCCTCTGCCCACTTTGCCACCACATTAGCTCAATCCTCACATaGGCCTTTTGGTTCTTGTAC +
Preference number: 4 (lower is better)
Translates to: TEGKRFPGGVLCPLCHHISSILT*AFWFLY
Trigger: GTACAAGAACCAAAAGGCCCATGTGAGGATTGAGCT...AATGTGGTGGCAAAGTGGGCAGAGGACCCCACCTGGGAACCTTTTTCCCTCAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp TGGCTGGACATGGATTTGCTGCACTGCAGATGTTTTCTGCAGACAAGGTCTGGATGCTGGCGAATGAGGTaGAGTCTTCGACCTGGTTCT +
Preference number: 4 (lower is better)
Translates to: WLDMDLLHCRCFLQTRSGCWRMR*SLRPGS
Trigger: AGAACCAGGTCGAAGACTCCACCTCATTCGCCAGCA...TCCAGACCTTGTCTGCAGAAAACATCTGCAGTGCAGCAAATCCATGTCCAGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp AAACTTTTCCCAGAGAAGAACTCTTTGTTGTCCCCGCTCAGCTGTAATTCTGCCGCATGGCCGGGATGCTaGCGAATGAGGTGGAGTCTT +
Preference number: 4 (lower is better)
Translates to: KLFPEKNSLLSPLSCNSAAWPGC*RMRWSL
Trigger: AAGACTCCACCTCATTCGCCAGCATCCCGGCCATGC...GGCAGAATTACAGCTGAGCGGGGACAACAAAGAGTTCTTCTCTGGGAAAAGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp AGTCCTCTTCCAGTGCTTCTAGGAAGTACGGCAAAAAGAATGGTGTTTGCTGTGGAGGTGGATTGGAGGTaGCTCAGTCCCCAGCCTTGT +
Preference number: 4 (lower is better)
Translates to: SPLPVLLGSTAKRMVFAVEVDWR*LSPQPC
Trigger: ACAAGGCTGGGGACTGAGCCACCTCCAATCCACCTC...CACAGCAAACACCATTCTTTTTGCCGTACTTCCTAGAAGCACTGGAAGAGGACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp CTTTGTTGTCCCCGCTCAGCTGTAATTCTGCCTTTTCTACCTTCATTCCATCCTTGCTGTGAGGTGGATTaGAGGTGGCTCAGTCCCCAG +
Preference number: 4 (lower is better)
Translates to: LCCPRSAVILPFLPSFHPCCEVD*RWLSPQ
Trigger: CTGGGGACTGAGCCACCTCCAATCCACCTCACAGCA...AGGATGGAATGAAGGTAGAAAAGGCAGAATTACAGCTGAGCGGGGACAACAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp CTTTGTTGTCCCCGCTCAGCTGTAATTCTGCCTTTTCTACCTTCATTCCATCCTCAGGGTGCTGTGAGGTaGATTGGAGGTGGCTCAGTC +
Preference number: 4 (lower is better)
Translates to: LCCPRSAVILPFLPSFHPQGAVR*IGGGSV
Trigger: GACTGAGCCACCTCCAATCCACCTCACAGCACCCTG...AGGATGGAATGAAGGTAGAAAAGGCAGAATTACAGCTGAGCGGGGACAACAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp AAACTTTTCCCAGAGAAGAACTCTTTGTTGTCCCCGCTCAGCTGTAATTCTGCCGAAGGTGGCTCTGGCTaGGGCTGTGTCCGAGGAATA +
Preference number: 4 (lower is better)
Translates to: KLFPEKNSLLSPLSCNSAEGGSG*GCVRGI
Trigger: TATTCCTCGGACACAGCCCCAGCCAGAGCCACCTTC...GGCAGAATTACAGCTGAGCGGGGACAACAAAGAGTTCTTCTCTGGGAAAAGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp CTTTGTTGTCCCCGCTCAGCTGTAATTCTGCCTTTTCTACCTTCATTCCATCCTGAAGGTGGCTCTGGCTaGGGCTGTGTCCGAGGAATA +
Preference number: 4 (lower is better)
Translates to: LCCPRSAVILPFLPSFHPEGGSG*GCVRGI
Trigger: TATTCCTCGGACACAGCCCCAGCCAGAGCCACCTTC...AGGATGGAATGAAGGTAGAAAAGGCAGAATTACAGCTGAGCGGGGACAACAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp AGTCCTCTTCCAGTGCTTCTAGGAAGTACGGCAAAAAGAATGGTGTTTGCTGTGCTGATCAGGAGAAGGTaGCTCTGGCTGGGGCTGTGT +
Preference number: 4 (lower is better)
Translates to: SPLPVLLGSTAKRMVFAVLIRRR*LWLGLC
Trigger: ACACAGCCCCAGCCAGAGCCACCTTCTCCTGATCAG...CACAGCAAACACCATTCTTTTTGCCGTACTTCCTAGAAGCACTGGAAGAGGACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp GAGGGAGGTGATAAGGTGTCATGCGTTCTGCTGAACCCACTGGCTGGTATGAACAAAAATCTGGCAAGCTaGGTGCACAGTTGCATCCTG +
Preference number: 4 (lower is better)
Translates to: EGGDKVSCVLLNPLAGMNKNLAS*VHSCIL
Trigger: CAGGATGCAACTGTGCACCCAGCTTGCCAGATTTTT...GTTCATACCAGCCAGTGGGTTCAGCAGAACGCATGACACCTTATCACCTCCCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp AGGCAGCAGCTGGTTGCCTGGCTGGACATGGATTTGCTGCACTGCAGATGTTTTAAAAATCTGGCAAGCTaGGTGCACAGTTGCATCCTG +
Preference number: 4 (lower is better)
Translates to: RQQLVAWLDMDLLHCRCFKNLAS*VHSCIL
Trigger: CAGGATGCAACTGTGCACCCAGCTTGCCAGATTTTT...AAAACATCTGCAGTGCAGCAAATCCATGTCCAGCCAGGCAACCAGCTGCTGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp CAGATGTTTTCTGCAGACAAGGTCTGGAGCTGGAGCAGGAAACGGCACCCTCTCAAGGATATGCCACACTaGGGGTGTAATGGGGAAAAA +
Preference number: 4 (lower is better)
Translates to: QMFSADKVWSWSRKRHPLKDMPH*GCNGEK
Trigger: TTTTTCCCCATTACACCCCCAGTGTGGCATATCCTT...GAGAGGGTGCCGTTTCCTGCTCCAGCTCCAGACCTTGTCTGCAGAAAACATCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp GAGGGAGGTGATAAGGTGTCATGCGTTCTGCTGAACCCACTGGCTGGTATGAACGAATGGTGTTTGCTGTaGTCCTTTCCTTTCCCAGGA +
Preference number: 4 (lower is better)
Translates to: EGGDKVSCVLLNPLAGMNEWCLL*SFPFPG
Trigger: TCCTGGGAAAGGAAAGGACCACAGCAAACACCATTC...GTTCATACCAGCCAGTGGGTTCAGCAGAACGCATGACACCTTATCACCTCCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp AAGGTGTCATGCGTTCTGCTGAACCCACTGGCTGGTATGAACATGAGGCTTGGGGAATGGTGTTTGCTGTaGTCCTTTCCTTTCCCAGGA +
Preference number: 4 (lower is better)
Translates to: KVSCVLLNPLAGMNMRLGEWCLL*SFPFPG
Trigger: TCCTGGGAAAGGAAAGGACCACAGCAAACACCATTC...CCCAAGCCTCATGTTCATACCAGCCAGTGGGTTCAGCAGAACGCATGACACCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp GGTGATAAGGTGTCATGCGTTCTGCTGAACCCACTGGCTGGTATGAACATGAGGTTGCCTGGCTGGACATaGATTTGCTGCACTGCAGAT +
Preference number: 4 (lower is better)
Translates to: GDKVSCVLLNPLAGMNMRLPGWT*ICCTAD
Trigger: ATCTGCAGTGCAGCAAATCCATGTCCAGCCAGGCAA...CCTCATGTTCATACCAGCCAGTGGGTTCAGCAGAACGCATGACACCTTATCACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp AAAGCTGGTGTTCAGAGCTCACCCAAGGAGGGAGGTGATAAGGTGTCATGCGTTTTGCCTGGCTGGACATaGATTTGCTGCACTGCAGAT +
Preference number: 4 (lower is better)
Translates to: KAGVQSSPKEGGDKVSCVLPGWT*ICCTAD
Trigger: ATCTGCAGTGCAGCAAATCCATGTCCAGCCAGGCAA...AACGCATGACACCTTATCACCTCCCTCCTTGGGTGAGCTCTGAACACCAGCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp ACCAAGGCTGCTGTACCCACCTCAGGGACAGAACTCCACACTATAGTGGGAAAGAAACCAAGTAGGGGTTaGAGAAGGAGCAGCACCTTT +
Preference number: 4 (lower is better)
Translates to: TKAAVPTSGTELHTIVGKKPSRG*RRSSTF
Trigger: AAAGGTGCTGCTCCTTCTCCAACCCCTACTTGGTTT...CTTTCCCACTATAGTGTGGAGTTCTGTCCCTGAGGTGGGTACAGCAGCCTTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp CTTGTCCACTCAGTGAGGCCAGACTTGTGCTCTAATCCACTCTCCTGTGGGTCCTATGAACATGAGGCTTaGGGTGAGGGAAACCAAGTA +
Preference number: 4 (lower is better)
Translates to: LVHSVRPDLCSNPLSCGSYEHEA*GEGNQV
Trigger: TACTTGGTTTCCCTCACCCCAAGCCTCATGTTCATA...GGACCCACAGGAGAGTGGATTAGAGCACAAGTCTGGCCTCACTGAGTGGACAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp CAGATGTTTTCTGCAGACAAGGTCTGGAGCTGGAGCAGGAAACGGCACCCTCTCTATGAACATGAGGCTTaGGGTGAGGGAAACCAAGTA +
Preference number: 4 (lower is better)
Translates to: QMFSADKVWSWSRKRHPLYEHEA*GEGNQV
Trigger: TACTTGGTTTCCCTCACCCCAAGCCTCATGTTCATA...GAGAGGGTGCCGTTTCCTGCTCCAGCTCCAGACCTTGTCTGCAGAAAACATCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp TGGCTGGACATGGATTTGCTGCACTGCAGATGTTTTCTGCAGACAAGGTCTGGATCTCCTGTGGGTCCCTaGCCTGTATGGCTTATACTG +
Preference number: 4 (lower is better)
Translates to: WLDMDLLHCRCFLQTRSGSPVGP*PVWLIL
Trigger: CAGTATAAGCCATACAGGCCAGGGACCCACAGGAGA...TCCAGACCTTGTCTGCAGAAAACATCTGCAGTGCAGCAAATCCATGTCCAGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp AAACTTTTCCCAGAGAAGAACTCTTTGTTGTCCCCGCTCAGCTGTAATTCTGCCGTGGTCAGGCTGCCCTaGGGTGAATGTCACCCTGAT +
Preference number: 4 (lower is better)
Translates to: KLFPEKNSLLSPLSCNSAVVRLP*GECHPD
Trigger: ATCAGGGTGACATTCACCCCAGGGCAGCCTGACCAC...GGCAGAATTACAGCTGAGCGGGGACAACAAAGAGTTCTTCTCTGGGAAAAGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp AGTCCTCTTCCAGTGCTTCTAGGAAGTACGGCAAAAAGAATGGTGTTTGCTGTGGTGGTCAGGCTGCCCTaGGGTGAATGTCACCCTGAT +
Preference number: 4 (lower is better)
Translates to: SPLPVLLGSTAKRMVFAVVVRLP*GECHPD
Trigger: ATCAGGGTGACATTCACCCCAGGGCAGCCTGACCAC...CACAGCAAACACCATTCTTTTTGCCGTACTTCCTAGAAGCACTGGAAGAGGACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR TCA 90 bp AAAGCTGGTGTTCAGAGCTCACCCAAGGAGGGAGGTGATAAGGTGTCATGCGTTAAATTTACTCCGGGATaGGAGATGCTGTCCCCTAGA +
Preference number: 4 (lower is better)
Translates to: KAGVQSSPKEGGDKVSCVKFTPG*EMLSPR
Trigger: TCTAGGGGACAGCATCTCTCATCCCGGAGTAAATTT...AACGCATGACACCTTATCACCTCCCTCCTTGGGTGAGCTCTGAACACCAGCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000584437.5
CDS-3UTR TCA 90 bp GAGCAGCACCTTTGTAACACCTGGCTACCCATAGCTAGCTTTCTGCCCTCAAAACTGAGTTGGATCTGGTaGCTTGCTGATCAGGAGAAG +
Preference number: 4 (lower is better)
Translates to: EQHLCNTWLPIASFLPSKLSWIW*LADQEK
Trigger: CTTCTCCTGATCAGCAAGTCACCAGATCCAACTCAG...TTTTGAGGGCAGAAAGCTAGCTATGGGTAGCCAGGTGTTACAAAGGTGCTGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR TCA 90 bp AGAACTCTTTGTTGTCCCCGCTCAGCTGTAATTCTGCCTTTTCTACCTTCATTCAGCCAGGGTTGCCCCTaGTGTAGCAGCCTTACTGTG +
Preference number: 4 (lower is better)
Translates to: RTLCCPRSAVILPFLPSFSQGCP*CSSLTV
Trigger: CACAGTAAGGCTGCTACATCAGGGGCAACCCTGGCT...GAATGAAGGTAGAAAAGGCAGAATTACAGCTGAGCGGGGACAACAAAGAGTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR GCA 90 bp AGCAGCTGGTTGCCTGGCTGGACATGGATTTGCTGCACTGCAGATGTTTTCTGCCGGAAGGATTCCGAGTaGTTCCTTTCAGAAAGACAA +
Preference number: 4 (lower is better)
Translates to: SSWLPGWTWICCTADVFCRKDSE*FLSERQ
Trigger: TTGTCTTTCTGAAAGGAAGCACTCGGAATCCTTCCG...GCAGAAAACATCTGCAGTGCAGCAAATCCATGTCCAGCCAGGCAACCAGCTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000584437.5
CDS-3UTR GCA 90 bp AAGGTGTCATGCGTTCTGCTGAACCCACTGGCTGGTATGAACATGAGGCTTGGGCGGAAGGATTCCGAGTaGTTCCTTTCAGAAAGACAA +
Preference number: 4 (lower is better)
Translates to: KVSCVLLNPLAGMNMRLGRKDSE*FLSERQ
Trigger: TTGTCTTTCTGAAAGGAAGCACTCGGAATCCTTCCG...CCCAAGCCTCATGTTCATACCAGCCAGTGGGTTCAGCAGAACGCATGACACCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000584437.5
CDS-3UTR GCA 90 bp TGGCTGGACATGGATTTGCTGCACTGCAGATGTTTTCTGCAGACAAGGTCTGGACATACTACAGGTAGGTaGCGAGAAATTCCGCAGCCT +
Preference number: 4 (lower is better)
Translates to: WLDMDLLHCRCFLQTRSGHTTGR*REIPQP
Trigger: AGGCTGCGGAATTTCTCGGCACCTACCTGTAGTATG...TCCAGACCTTGTCTGCAGAAAACATCTGCAGTGCAGCAAATCCATGTCCAGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000584437.5
CDS-3UTR GCA 90 bp ACCAAGGCTGCTGTACCCACCTCAGGGACAGAACTCCACACTATAGTGGGAAAGCATTGCTCTTCCATATaGATCAAGTTGCCAGGCACT +
Preference number: 4 (lower is better)
Translates to: TKAAVPTSGTELHTIVGKHCSSI*IKLPGT
Trigger: AGTGCCTGGCAACTTGATGCATATGGAAGAGCAATG...CTTTCCCACTATAGTGTGGAGTTCTGTCCCTGAGGTGGGTACAGCAGCCTTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000407977.7
ENST00000584437.5
CDS-3UTR GCA 90 bp CAGATGTTTTCTGCAGACAAGGTCTGGAGCTGGAGCAGGAAACGGCACCCTCTCTTTTCAGCCCACATCTaGTGCAGGTATGTCATTTTC +
Preference number: 4 (lower is better)
Translates to: QMFSADKVWSWSRKRHPLFSAHI*CRYVIF
Trigger: GAAAATGACATACCTGCAGCAGATGTGGGCTGAAAA...GAGAGGGTGCCGTTTCCTGCTCCAGCTCCAGACCTTGTCTGCAGAAAACATCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000407977.7
ENST00000584437.5
CDS-3UTR GCA 90 bp TGCCCTCAAAAACTCAGCCTTCAAGGGATCCAGCCCACACACGCCACAGGCAGCGGAAAAGAACATTTATaGTTCCGTTTCAGAAAGCCA +
Preference number: 4 (lower is better)
Translates to: CPQKLSLQGIQPTHATGSGKEHL*FRFRKP
Trigger: TGGCTTTCTGAAACGGAAGCATAAATGTTCTTTTCC...GCTGCCTGTGGCGTGTGTGGGCTGGATCCCTTGAAGGCTGAGTTTTTGAGGGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000584437.5
CDS-3UTR GCA 90 bp ACTGAGGGAAAAAGGTTCCCAGGTGGGGTCCTCTGCCCACTTTGCCACCACATTTACCAGCTGCAGCAATaGACTTCAACCATACATACT +
Preference number: 4 (lower is better)
Translates to: TEGKRFPGGVLCPLCHHIYQLQQ*TSTIHT
Trigger: AGTATGTATGGTTGAAGTGCATTGCTGCAGCTGGTA...AATGTGGTGGCAAAGTGGGCAGAGGACCCCACCTGGGAACCTTTTTCCCTCAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR GCA 90 bp GGTGATAAGGTGTCATGCGTTCTGCTGAACCCACTGGCTGGTATGAACATGAGGGGCTGGACATGGATTTaGTGCACTGCAGATGTTTTC +
Preference number: 4 (lower is better)
Translates to: GDKVSCVLLNPLAGMNMRGWTWI*CTADVF
Trigger: GAAAACATCTGCAGTGCAGCAAATCCATGTCCAGCC...CCTCATGTTCATACCAGCCAGTGGGTTCAGCAGAACGCATGACACCTTATCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR GCA 90 bp AAACTTTTCCCAGAGAAGAACTCTTTGTTGTCCCCGCTCAGCTGTAATTCTGCCCAGGCAGCAGCTGGTTaGCTGGCTGGACATGGATTT +
Preference number: 4 (lower is better)
Translates to: KLFPEKNSLLSPLSCNSAQAAAG*LAGHGF
Trigger: AAATCCATGTCCAGCCAGGCAACCAGCTGCTGCCTG...GGCAGAATTACAGCTGAGCGGGGACAACAAAGAGTTCTTCTCTGGGAAAAGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR GCA 90 bp AGTCCTCTTCCAGTGCTTCTAGGAAGTACGGCAAAAAGAATGGTGTTTGCTGTGCAGGCAGCAGCTGGTTaGCTGGCTGGACATGGATTT +
Preference number: 4 (lower is better)
Translates to: SPLPVLLGSTAKRMVFAVQAAAG*LAGHGF
Trigger: AAATCCATGTCCAGCCAGGCAACCAGCTGCTGCCTG...CACAGCAAACACCATTCTTTTTGCCGTACTTCCTAGAAGCACTGGAAGAGGACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR GCA 90 bp GAGCAGCACCTTTGTAACACCTGGCTACCCATAGCTAGCTTTCTGCCCTCAAAAGTCCTCTGCCCACTTTaGCACCACATTCACATTCCA +
Preference number: 4 (lower is better)
Translates to: EQHLCNTWLPIASFLPSKVLCPL*HHIHIP
Trigger: TGGAATGTGAATGTGGTGGCAAAGTGGGCAGAGGAC...TTTTGAGGGCAGAAAGCTAGCTATGGGTAGCCAGGTGTTACAAAGGTGCTGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp CTTGTCCACTCAGTGAGGCCAGACTTGTGCTCTAATCCACTCTCCTGTGGGTCCGGTAGCATTCCTGATTaGGCAGAGAAGAGGATATTT +
Preference number: 4 (lower is better)
Translates to: LVHSVRPDLCSNPLSCGSGSIPD*AEKRIF
Trigger: AAATATCCTCTTCTCTGCCCAATCAGGAATGCTACC...GGACCCACAGGAGAGTGGATTAGAGCACAAGTCTGGCCTCACTGAGTGGACAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000407977.7
ENST00000584437.5
CDS-3UTR CCA 90 bp AAGAACTCTTTGTTGTCCCCGCTCAGCTGTAATTCTGCCTTTTCTACCTTCATTGCCAGCTGCAGCTGGTaGCCACCACTCATGCTACCA +
Preference number: 4 (lower is better)
Translates to: KNSLLSPLSCNSAFSTFIASCSW*PPLMLP
Trigger: TGGTAGCATGAGTGGTGGCCACCAGCTGCAGCTGGC...AATGAAGGTAGAAAAGGCAGAATTACAGCTGAGCGGGGACAACAAAGAGTTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp GGTGATAAGGTGTCATGCGTTCTGCTGAACCCACTGGCTGGTATGAACATGAGGTCCACACAGTTACGATaGAACTCATGGAGGCAGGAA +
Preference number: 4 (lower is better)
Translates to: GDKVSCVLLNPLAGMNMRSTQLR*NSWRQE
Trigger: TTCCTGCCTCCATGAGTTCCATCGTAACTGTGTGGA...CCTCATGTTCATACCAGCCAGTGGGTTCAGCAGAACGCATGACACCTTATCACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp CCTGGCTGGACATGGATTTGCTGCACTGCAGATGTTTTCTGCAGACAAGGTCTGTCCACACAGTTACGATaGAACTCATGGAGGCAGGAA +
Preference number: 4 (lower is better)
Translates to: PGWTWICCTADVFCRQGLSTQLR*NSWRQE
Trigger: TTCCTGCCTCCATGAGTTCCATCGTAACTGTGTGGA...CAGACCTTGTCTGCAGAAAACATCTGCAGTGCAGCAAATCCATGTCCAGCCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp GGTGATAAGGTGTCATGCGTTCTGCTGAACCCACTGGCTGGTATGAACATGAGGGTGGAGTCTTCGACCTaGTTCTTGGTAAGATCGAGA +
Preference number: 4 (lower is better)
Translates to: GDKVSCVLLNPLAGMNMRVESST*FLVRSR
Trigger: TCTCGATCTTACCAAGAACCAGGTCGAAGACTCCAC...CCTCATGTTCATACCAGCCAGTGGGTTCAGCAGAACGCATGACACCTTATCACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp AGAACTCTTTGTTGTCCCCGCTCAGCTGTAATTCTGCCTTTTCTACCTTCATTCCTGATCAGGAGAAGGTaGCTCTGGCTGGGGCTGTGT +
Preference number: 4 (lower is better)
Translates to: RTLCCPRSAVILPFLPSFLIRRR*LWLGLC
Trigger: ACACAGCCCCAGCCAGAGCCACCTTCTCCTGATCAG...GAATGAAGGTAGAAAAGGCAGAATTACAGCTGAGCGGGGACAACAAAGAGTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp AGCAGCTGGTTGCCTGGCTGGACATGGATTTGCTGCACTGCAGATGTTTTCTGCAAGGATATGCCACACTaGGGGTGTAATGGGGAAAAA +
Preference number: 4 (lower is better)
Translates to: SSWLPGWTWICCTADVFCKDMPH*GCNGEK
Trigger: TTTTTCCCCATTACACCCCCAGTGTGGCATATCCTT...GCAGAAAACATCTGCAGTGCAGCAAATCCATGTCCAGCCAGGCAACCAGCTGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp ACTGAGGGAAAAAGGTTCCCAGGTGGGGTCCTCTGCCCACTTTGCCACCACATTGTACGGCAAAAAGAATaGTGTTTGCTGTGGTCCTTT +
Preference number: 4 (lower is better)
Translates to: TEGKRFPGGVLCPLCHHIVRQKE*CLLWSF
Trigger: AAAGGACCACAGCAAACACCATTCTTTTTGCCGTAC...AATGTGGTGGCAAAGTGGGCAGAGGACCCCACCTGGGAACCTTTTTCCCTCAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp AAACTTTTCCCAGAGAAGAACTCTTTGTTGTCCCCGCTCAGCTGTAATTCTGCCCAGCAGCTGGTTGCCTaGCTGGACATGGATTTGCTG +
Preference number: 4 (lower is better)
Translates to: KLFPEKNSLLSPLSCNSAQQLVA*LDMDLL
Trigger: CAGCAAATCCATGTCCAGCCAGGCAACCAGCTGCTG...GGCAGAATTACAGCTGAGCGGGGACAACAAAGAGTTCTTCTCTGGGAAAAGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp GAGGGAGGTGATAAGGTGTCATGCGTTCTGCTGAACCCACTGGCTGGTATGAACTATGAACATGAGGCTTaGGGTGAGGGAAACCAAGTA +
Preference number: 4 (lower is better)
Translates to: EGGDKVSCVLLNPLAGMNYEHEA*GEGNQV
Trigger: TACTTGGTTTCCCTCACCCCAAGCCTCATGTTCATA...GTTCATACCAGCCAGTGGGTTCAGCAGAACGCATGACACCTTATCACCTCCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp CTTTGTTGTCCCCGCTCAGCTGTAATTCTGCCTTTTCTACCTTCATTCCATCCTTGGAGGGGCCAAAGCTaGTGTTCAGAGCTCACCCAA +
Preference number: 4 (lower is better)
Translates to: LCCPRSAVILPFLPSFHPWRGQS*CSELTQ
Trigger: TTGGGTGAGCTCTGAACACCAGCTTTGGCCCCTCCA...AGGATGGAATGAAGGTAGAAAAGGCAGAATTACAGCTGAGCGGGGACAACAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp AGTCCTCTTCCAGTGCTTCTAGGAAGTACGGCAAAAAGAATGGTGTTTGCTGTGTGGAGGGGCCAAAGCTaGTGTTCAGAGCTCACCCAA +
Preference number: 4 (lower is better)
Translates to: SPLPVLLGSTAKRMVFAVWRGQS*CSELTQ
Trigger: TTGGGTGAGCTCTGAACACCAGCTTTGGCCCCTCCA...CACAGCAAACACCATTCTTTTTGCCGTACTTCCTAGAAGCACTGGAAGAGGACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp AGTCCTCTTCCAGTGCTTCTAGGAAGTACGGCAAAAAGAATGGTGTTTGCTGTGCTTATACTGGGGAGCTaGGCCTCTGGGCTGTCCAAA +
Preference number: 4 (lower is better)
Translates to: SPLPVLLGSTAKRMVFAVLILGS*ASGLSK
Trigger: TTTGGACAGCCCAGAGGCCCAGCTCCCCAGTATAAG...CACAGCAAACACCATTCTTTTTGCCGTACTTCCTAGAAGCACTGGAAGAGGACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp TCCTTCCTCTGCCCAGATAAAGTCCAGCAGAAATTCCTCCTTTCTACCTCTCTGAAAAAGGTTCCCAGGTaGGGTCCTCTGCCCACTTTG +
Preference number: 4 (lower is better)
Translates to: SFLCPDKVQQKFLLSTSLKKVPR*GPLPTL
Trigger: CAAAGTGGGCAGAGGACCCCACCTGGGAACCTTTTT...CAGAGAGGTAGAAAGGAGGAATTTCTGCTGGACTTTATCTGGGCAGAGGAAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR TCA 90 bp AAGGTGTCATGCGTTCTGCTGAACCCACTGGCTGGTATGAACATGAGGCTTGGGAGAAATTCCGCAGCCTaGAAAAATAATCCATGCAGG +
Preference number: 4 (lower is better)
Translates to: KVSCVLLNPLAGMNMRLGRNSAA*KNNPCR
Trigger: CCTGCATGGATTATTTTTTCAGGCTGCGGAATTTCT...CCCAAGCCTCATGTTCATACCAGCCAGTGGGTTCAGCAGAACGCATGACACCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000584437.5
CDS-3UTR TCA 90 bp AGGCAGCAGCTGGTTGCCTGGCTGGACATGGATTTGCTGCACTGCAGATGTTTTTGGAATCCACGGGGGTaGAACAAATTCAATTATGCT +
Preference number: 4 (lower is better)
Translates to: RQQLVAWLDMDLLHCRCFWNPRG*NKFNYA
Trigger: AGCATAATTGAATTTGTTTCACCCCCGTGGATTCCA...AAAACATCTGCAGTGCAGCAAATCCATGTCCAGCCAGGCAACCAGCTGCTGCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000584437.5
CDS-3UTR TCA 90 bp AAACTTTTCCCAGAGAAGAACTCTTTGTTGTCCCCGCTCAGCTGTAATTCTGCCCAGCTCGATCCTCAGTaGTGTCAAAGAGGACAGCAC +
Preference number: 4 (lower is better)
Translates to: KLFPEKNSLLSPLSCNSAQLDPQ*CQRGQH
Trigger: GTGCTGTCCTCTTTGACATCACTGAGGATCGAGCTG...GGCAGAATTACAGCTGAGCGGGGACAACAAAGAGTTCTTCTCTGGGAAAAGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR TCA 90 bp AAGAACTCTTTGTTGTCCCCGCTCAGCTGTAATTCTGCCTTTTCTACCTTCATTAGCCAGGGTTGCCCCTaGTGTAGCAGCCTTACTGTG +
Preference number: 4 (lower is better)
Translates to: KNSLLSPLSCNSAFSTFISQGCP*CSSLTV
Trigger: CACAGTAAGGCTGCTACATCAGGGGCAACCCTGGCT...AATGAAGGTAGAAAAGGCAGAATTACAGCTGAGCGGGGACAACAAAGAGTTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR TCA 90 bp CACTGCAGATGTTTTCTGCAGACAAGGTCTGGAGCTGGAGCAGGAAACGGCACCTCTCTTAAGGATTCTTaGTTTTATTCTCCAGCTCGG +
Preference number: 4 (lower is better)
Translates to: HCRCFLQTRSGAGAGNGTSLKDS*FYSPAR
Trigger: CCGAGCTGGAGAATAAAATCAAGAATCCTTAAGAGA...GGTGCCGTTTCCTGCTCCAGCTCCAGACCTTGTCTGCAGAAAACATCTGCAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000584437.5
CDS-3UTR GCA 90 bp AAAAGGTTCCCAGGTGGGGTCCTCTGCCCACTTTGCCACCACATTCACATTCCACAGATCACTTGGCATTaGTCTTCCATATGCATCAAG +
Preference number: 4 (lower is better)
Translates to: KRFPGGVLCPLCHHIHIPQITWH*SSICIK
Trigger: CTTGATGCATATGGAAGAGCAATGCCAAGTGATCTG...TGGAATGTGAATGTGGTGGCAAAGTGGGCAGAGGACCCCACCTGGGAACCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000407977.7
ENST00000584437.5
CDS-3UTR GCA 90 bp AGCAGCTGGTTGCCTGGCTGGACATGGATTTGCTGCACTGCAGATGTTTTCTGCTTTTCAGCCCACATCTaGTGCAGGTATGTCATTTTC +
Preference number: 4 (lower is better)
Translates to: SSWLPGWTWICCTADVFCFSAHI*CRYVIF
Trigger: GAAAATGACATACCTGCAGCAGATGTGGGCTGAAAA...GCAGAAAACATCTGCAGTGCAGCAAATCCATGTCCAGCCAGGCAACCAGCTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000407977.7
ENST00000584437.5
CDS-3UTR GCA 90 bp AGGCAGCAGCTGGTTGCCTGGCTGGACATGGATTTGCTGCACTGCAGATGTTTTCTAGCTAATACCAAATaGAGGTTCTCAGATCCAGAC +
Preference number: 4 (lower is better)
Translates to: RQQLVAWLDMDLLHCRCFLANTK*RFSDPD
Trigger: GTCTGGATCTGAGAACCTGCATTTGGTATTAGCTAG...AAAACATCTGCAGTGCAGCAAATCCATGTCCAGCCAGGCAACCAGCTGCTGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000584437.5
CDS-3UTR GCA 90 bp AGGCAGCAGCTGGTTGCCTGGCTGGACATGGATTTGCTGCACTGCAGATGTTTTTACCAGCTGCAGCAATaGACTTCAACCATACATACT +
Preference number: 4 (lower is better)
Translates to: RQQLVAWLDMDLLHCRCFYQLQQ*TSTIHT
Trigger: AGTATGTATGGTTGAAGTGCATTGCTGCAGCTGGTA...AAAACATCTGCAGTGCAGCAAATCCATGTCCAGCCAGGCAACCAGCTGCTGCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR GCA 90 bp TGGCTGGACATGGATTTGCTGCACTGCAGATGTTTTCTGCAGACAAGGTCTGGAACTCATGCTACCAGCTaGAGCAATGCACTTCAACCA +
Preference number: 4 (lower is better)
Translates to: WLDMDLLHCRCFLQTRSGTHATS*SNALQP
Trigger: TGGTTGAAGTGCATTGCTGCAGCTGGTAGCATGAGT...TCCAGACCTTGTCTGCAGAAAACATCTGCAGTGCAGCAAATCCATGTCCAGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR GCA 90 bp AAGAACTCTTTGTTGTCCCCGCTCAGCTGTAATTCTGCCTTTTCTACCTTCATTCGTCATCACTGGCATTaGACAGGTACAGCGGGTGGG +
Preference number: 4 (lower is better)
Translates to: KNSLLSPLSCNSAFSTFIRHHWH*TGTAGG
Trigger: CCCACCCGCTGTACCTGTGCAATGCCAGTGATGACG...AATGAAGGTAGAAAAGGCAGAATTACAGCTGAGCGGGGACAACAAAGAGTTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000584437.5
CDS-3UTR GCA 90 bp TCCTTCCTCTGCCCAGATAAAGTCCAGCAGAAATTCCTCCTTTCTACCTCTCTGGGTGATAAGGTGTCATaGGTTCTGCTGAACCCACTG +
Preference number: 4 (lower is better)
Translates to: SFLCPDKVQQKFLLSTSLGDKVS*VLLNPL
Trigger: CAGTGGGTTCAGCAGAACGCATGACACCTTATCACC...CAGAGAGGTAGAAAGGAGGAATTTCTGCTGGACTTTATCTGGGCAGAGGAAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR GCA 90 bp GAGCAGCACCTTTGTAACACCTGGCTACCCATAGCTAGCTTTCTGCCCTCAAAACCAAGGGTCACACTTTaGTTTTCCTTTGTTGTCCCC +
Preference number: 4 (lower is better)
Translates to: EQHLCNTWLPIASFLPSKPRVTL*FSFVVP
Trigger: GGGGACAACAAAGGAAAAGCAAAGTGTGACCCTTGG...TTTTGAGGGCAGAAAGCTAGCTATGGGTAGCCAGGTGTTACAAAGGTGCTGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR GCA 90 bp AAGAACTCTTTGTTGTCCCCGCTCAGCTGTAATTCTGCCTTTTCTACCTTCATTCCAGGTGGGGTCCTCTaGCCACTTTGCCACCACATT +
Preference number: 4 (lower is better)
Translates to: KNSLLSPLSCNSAFSTFIPGGVL*PLCHHI
Trigger: AATGTGGTGGCAAAGTGGGCAGAGGACCCCACCTGG...AATGAAGGTAGAAAAGGCAGAATTACAGCTGAGCGGGGACAACAAAGAGTTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR GCA 90 bp AAAGCTGGTGTTCAGAGCTCACCCAAGGAGGGAGGTGATAAGGTGTCATGCGTTAAACAGCTAAGGCCATaGATCAAAGGTGAGCGTGAA +
Preference number: 4 (lower is better)
Translates to: KAGVQSSPKEGGDKVSCVKQLRP*IKGERE
Trigger: TTCACGCTCACCTTTGATGCATGGCCTTAGCTGTTT...AACGCATGACACCTTATCACCTCCCTCCTTGGGTGAGCTCTGAACACCAGCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584437.5
CDS-3UTR CCA 90 bp AAGGTGTCATGCGTTCTGCTGAACCCACTGGCTGGTATGAACATGAGGCTTGGGAATCATGGATGGACTTaGAAAGTTCGGAAGGATTCC +
Preference number: 4 (lower is better)
Translates to: KVSCVLLNPLAGMNMRLGNHGWT*KVRKDS
Trigger: GGAATCCTTCCGAACTTTCCAAGTCCATCCATGATT...CCCAAGCCTCATGTTCATACCAGCCAGTGGGTTCAGCAGAACGCATGACACCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000584437.5
CDS-3UTR CCA 90 bp AGGCAGCAGCTGGTTGCCTGGCTGGACATGGATTTGCTGCACTGCAGATGTTTTAATCATGGATGGACTTaGAAAGTTCGGAAGGATTCC +
Preference number: 4 (lower is better)
Translates to: RQQLVAWLDMDLLHCRCFNHGWT*KVRKDS
Trigger: GGAATCCTTCCGAACTTTCCAAGTCCATCCATGATT...AAAACATCTGCAGTGCAGCAAATCCATGTCCAGCCAGGCAACCAGCTGCTGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000584437.5
CDS-3UTR CCA 90 bp GAGGGAGGTGATAAGGTGTCATGCGTTCTGCTGAACCCACTGGCTGGTATGAACTCTCTGAATCATGGATaGACTTGGAAAGTTCGGAAG +
Preference number: 4 (lower is better)
Translates to: EGGDKVSCVLLNPLAGMNSLNHG*TWKVRK
Trigger: CTTCCGAACTTTCCAAGTCCATCCATGATTCAGAGA...GTTCATACCAGCCAGTGGGTTCAGCAGAACGCATGACACCTTATCACCTCCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000584437.5
CDS-3UTR CCA 90 bp CTTGTCCACTCAGTGAGGCCAGACTTGTGCTCTAATCCACTCTCCTGTGGGTCCTTATGTCAGATCACTTaGCATTGCTCTTCCATATGC +
Preference number: 4 (lower is better)
Translates to: LVHSVRPDLCSNPLSCGSLCQIT*HCSSIC
Trigger: GCATATGGAAGAGCAATGCCAAGTGATCTGACATAA...GGACCCACAGGAGAGTGGATTAGAGCACAAGTCTGGCCTCACTGAGTGGACAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000407977.7
ENST00000584437.5
CDS-3UTR CCA 90 bp GAGGGAGGTGATAAGGTGTCATGCGTTCTGCTGAACCCACTGGCTGGTATGAACGGTAGCATTCCTGATTaGGCAGAGAAGAGGATATTT +
Preference number: 4 (lower is better)
Translates to: EGGDKVSCVLLNPLAGMNGSIPD*AEKRIF
Trigger: AAATATCCTCTTCTCTGCCCAATCAGGAATGCTACC...GTTCATACCAGCCAGTGGGTTCAGCAGAACGCATGACACCTTATCACCTCCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000407977.7
ENST00000584437.5
CDS-3UTR CCA 90 bp TGGCTGGACATGGATTTGCTGCACTGCAGATGTTTTCTGCAGACAAGGTCTGGACACAGGTACAGCGGGTaGGACTGCATTAATTTTCCT +
Preference number: 4 (lower is better)
Translates to: WLDMDLLHCRCFLQTRSGHRYSG*DCINFP
Trigger: AGGAAAATTAATGCAGTCCCACCCGCTGTACCTGTG...TCCAGACCTTGTCTGCAGAAAACATCTGCAGTGCAGCAAATCCATGTCCAGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000584437.5
CDS-3UTR CCA 90 bp TCCTTCCTCTGCCCAGATAAAGTCCAGCAGAAATTCCTCCTTTCTACCTCTCTGGATTGTCGTCATCACTaGCATTGCACAGGTACAGCG +
Preference number: 4 (lower is better)
Translates to: SFLCPDKVQQKFLLSTSLDCRHH*HCTGTA
Trigger: CGCTGTACCTGTGCAATGCCAGTGATGACGACAATC...CAGAGAGGTAGAAAGGAGGAATTTCTGCTGGACTTTATCTGGGCAGAGGAAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000584437.5
CDS-3UTR CCA 90 bp CCTGGCTGGACATGGATTTGCTGCACTGCAGATGTTTTCTGCAGACAAGGTCTGCTCACATGGGCCTTTTaGTTCTTGTACACAAACTCC +
Preference number: 4 (lower is better)
Translates to: PGWTWICCTADVFCRQGLLTWAF*FLYTNS
Trigger: GGAGTTTGTGTACAAGAACCAAAAGGCCCATGTGAG...CAGACCTTGTCTGCAGAAAACATCTGCAGTGCAGCAAATCCATGTCCAGCCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp CCTGGCTGGACATGGATTTGCTGCACTGCAGATGTTTTCTGCAGACAAGGTCTGAGCTCAATCCTCACATaGGCCTTTTGGTTCTTGTAC +
Preference number: 4 (lower is better)
Translates to: PGWTWICCTADVFCRQGLSSILT*AFWFLY
Trigger: GTACAAGAACCAAAAGGCCCATGTGAGGATTGAGCT...CAGACCTTGTCTGCAGAAAACATCTGCAGTGCAGCAAATCCATGTCCAGCCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp CTTTGTTGTCCCCGCTCAGCTGTAATTCTGCCTTTTCTACCTTCATTCCATCCTGAGGGTCCCAGGGACTaGGAAAATGAATCTCCCTCT +
Preference number: 4 (lower is better)
Translates to: LCCPRSAVILPFLPSFHPEGPRD*ENESPS
Trigger: AGAGGGAGATTCATTTTCCCAGTCCCTGGGACCCTC...AGGATGGAATGAAGGTAGAAAAGGCAGAATTACAGCTGAGCGGGGACAACAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp AAGAACTCTTTGTTGTCCCCGCTCAGCTGTAATTCTGCCTTTTCTACCTTCATTTGCTGTGAGGTGGATTaGAGGTGGCTCAGTCCCCAG +
Preference number: 4 (lower is better)
Translates to: KNSLLSPLSCNSAFSTFICCEVD*RWLSPQ
Trigger: CTGGGGACTGAGCCACCTCCAATCCACCTCACAGCA...AATGAAGGTAGAAAAGGCAGAATTACAGCTGAGCGGGGACAACAAAGAGTTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp AGAACTCTTTGTTGTCCCCGCTCAGCTGTAATTCTGCCTTTTCTACCTTCATTCGTAGAACTGCTGCCATaGACCCCCTGTAGGCTGATG +
Preference number: 4 (lower is better)
Translates to: RTLCCPRSAVILPFLPSFVELLP*TPCRLM
Trigger: CATCAGCCTACAGGGGGTCCATGGCAGCAGTTCTAC...GAATGAAGGTAGAAAAGGCAGAATTACAGCTGAGCGGGGACAACAAAGAGTTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp AAGAACTCTTTGTTGTCCCCGCTCAGCTGTAATTCTGCCTTTTCTACCTTCATTTGCATGTCCACTCGCTaGGGATCCCCTTTAGGGCTG +
Preference number: 4 (lower is better)
Translates to: KNSLLSPLSCNSAFSTFICMSTR*GSPLGL
Trigger: CAGCCCTAAAGGGGATCCCCAGCGAGTGGACATGCA...AATGAAGGTAGAAAAGGCAGAATTACAGCTGAGCGGGGACAACAAAGAGTTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp AAACTTTTCCCAGAGAAGAACTCTTTGTTGTCCCCGCTCAGCTGTAATTCTGCCTCTGGAGCACACTCTTaGTTGGAGCTAGGCCTGAAC +
Preference number: 4 (lower is better)
Translates to: KLFPEKNSLLSPLSCNSASGAHS*LELGLN
Trigger: GTTCAGGCCTAGCTCCAACCAAGAGTGTGCTCCAGA...GGCAGAATTACAGCTGAGCGGGGACAACAAAGAGTTCTTCTCTGGGAAAAGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp AAGGTGTCATGCGTTCTGCTGAACCCACTGGCTGGTATGAACATGAGGCTTGGGGTACGGCAAAAAGAATaGTGTTTGCTGTGGTCCTTT +
Preference number: 4 (lower is better)
Translates to: KVSCVLLNPLAGMNMRLGVRQKE*CLLWSF
Trigger: AAAGGACCACAGCAAACACCATTCTTTTTGCCGTAC...CCCAAGCCTCATGTTCATACCAGCCAGTGGGTTCAGCAGAACGCATGACACCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp AAAGCTGGTGTTCAGAGCTCACCCAAGGAGGGAGGTGATAAGGTGTCATGCGTTCACCTTTGTAACACCTaGCTACCCATAGCTAGCTTT +
Preference number: 4 (lower is better)
Translates to: KAGVQSSPKEGGDKVSCVHLCNT*LPIASF
Trigger: AAAGCTAGCTATGGGTAGCCAGGTGTTACAAAGGTG...AACGCATGACACCTTATCACCTCCCTCCTTGGGTGAGCTCTGAACACCAGCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp GGTGATAAGGTGTCATGCGTTCTGCTGAACCCACTGGCTGGTATGAACATGAGGTCCTTTCTACCTCTCTaGGACTCTGAGACAGGAAAT +
Preference number: 4 (lower is better)
Translates to: GDKVSCVLLNPLAGMNMRSFLPL*DSETGN
Trigger: ATTTCCTGTCTCAGAGTCCCAGAGAGGTAGAAAGGA...CCTCATGTTCATACCAGCCAGTGGGTTCAGCAGAACGCATGACACCTTATCACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp AAAGCTGGTGTTCAGAGCTCACCCAAGGAGGGAGGTGATAAGGTGTCATGCGTTTCCTTTCTACCTCTCTaGGACTCTGAGACAGGAAAT +
Preference number: 4 (lower is better)
Translates to: KAGVQSSPKEGGDKVSCVSFLPL*DSETGN
Trigger: ATTTCCTGTCTCAGAGTCCCAGAGAGGTAGAAAGGA...AACGCATGACACCTTATCACCTCCCTCCTTGGGTGAGCTCTGAACACCAGCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp CTTTGTTGTCCCCGCTCAGCTGTAATTCTGCCTTTTCTACCTTCATTCCATCCTAAAAAGGTTCCCAGGTaGGGTCCTCTGCCCACTTTG +
Preference number: 4 (lower is better)
Translates to: LCCPRSAVILPFLPSFHPKKVPR*GPLPTL
Trigger: CAAAGTGGGCAGAGGACCCCACCTGGGAACCTTTTT...AGGATGGAATGAAGGTAGAAAAGGCAGAATTACAGCTGAGCGGGGACAACAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp AGTCCTCTTCCAGTGCTTCTAGGAAGTACGGCAAAAAGAATGGTGTTTGCTGTGAAAAAGGTTCCCAGGTaGGGTCCTCTGCCCACTTTG +
Preference number: 4 (lower is better)
Translates to: SPLPVLLGSTAKRMVFAVKKVPR*GPLPTL
Trigger: CAAAGTGGGCAGAGGACCCCACCTGGGAACCTTTTT...CACAGCAAACACCATTCTTTTTGCCGTACTTCCTAGAAGCACTGGAAGAGGACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp AAAGCTGGTGTTCAGAGCTCACCCAAGGAGGGAGGTGATAAGGTGTCATGCGTTCCTGTGGTTTGTAATTaGTGTTCTAGCTCTGACTCC +
Preference number: 4 (lower is better)
Translates to: KAGVQSSPKEGGDKVSCVPVVCN*CSSSDS
Trigger: GGAGTCAGAGCTAGAACACCAATTACAAACCACAGG...AACGCATGACACCTTATCACCTCCCTCCTTGGGTGAGCTCTGAACACCAGCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577716.5
CDS-3UTR TCA 90 bp TGGCTGGACATGGATTTGCTGCACTGCAGATGTTTTCTGCAGACAAGGTCTGGACTCCCATCTTCACTGTaGCTAGTAAAGATCTCACCA +
Preference number: 4 (lower is better)
Translates to: WLDMDLLHCRCFLQTRSGLPSSL*LVKISP
Trigger: TGGTGAGATCTTTACTAGTCACAGTGAAGATGGGAG...TCCAGACCTTGTCTGCAGAAAACATCTGCAGTGCAGCAAATCCATGTCCAGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407977.7
ENST00000584437.5
CDS-3UTR TCA 90 bp AGAACTCTTTGTTGTCCCCGCTCAGCTGTAATTCTGCCTTTTCTACCTTCATTCCAGCTCGATCCTCAGTaGTGTCAAAGAGGACAGCAC +
Preference number: 4 (lower is better)
Translates to: RTLCCPRSAVILPFLPSFQLDPQ*CQRGQH
Trigger: GTGCTGTCCTCTTTGACATCACTGAGGATCGAGCTG...GAATGAAGGTAGAAAAGGCAGAATTACAGCTGAGCGGGGACAACAAAGAGTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR TCA 90 bp AGAACTCTTTGTTGTCCCCGCTCAGCTGTAATTCTGCCTTTTCTACCTTCATTCGATCTGGTGACTTGCTaGTCAGGAGAAGGTGGCTCT +
Preference number: 4 (lower is better)
Translates to: RTLCCPRSAVILPFLPSFDLVTC*SGEGGS
Trigger: AGAGCCACCTTCTCCTGATCAGCAAGTCACCAGATC...GAATGAAGGTAGAAAAGGCAGAATTACAGCTGAGCGGGGACAACAAAGAGTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR TCA 90 bp AAACTTTTCCCAGAGAAGAACTCTTTGTTGTCCCCGCTCAGCTGTAATTCTGCCACCTCTCTGGGACTCTaGGACAGGAAATCTTCAAGG +
Preference number: 4 (lower is better)
Translates to: KLFPEKNSLLSPLSCNSATSLGL*DRKSSR
Trigger: CCTTGAAGATTTCCTGTCTCAGAGTCCCAGAGAGGT...GGCAGAATTACAGCTGAGCGGGGACAACAAAGAGTTCTTCTCTGGGAAAAGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR TCA 90 bp AAGGTGTCATGCGTTCTGCTGAACCCACTGGCTGGTATGAACATGAGGCTTGGGCACTTTGATTTCCCATaGGATGCTTTTGGAAACTAC +
Preference number: 4 (lower is better)
Translates to: KVSCVLLNPLAGMNMRLGHFDFP*DAFGNY
Trigger: GTAGTTTCCAAAAGCATCTCATGGGAAATCAAAGTG...CCCAAGCCTCATGTTCATACCAGCCAGTGGGTTCAGCAGAACGCATGACACCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584437.5
CDS-3UTR GCA 90 bp TCCTTCCTCTGCCCAGATAAAGTCCAGCAGAAATTCCTCCTTTCTACCTCTCTGCTCCGGGATGAGAGATaGTGTCCCCTAGAACTAAAT +
Preference number: 4 (lower is better)
Translates to: SFLCPDKVQQKFLLSTSLLRDER*CPLELN
Trigger: ATTTAGTTCTAGGGGACAGCATCTCTCATCCCGGAG...CAGAGAGGTAGAAAGGAGGAATTTCTGCTGGACTTTATCTGGGCAGAGGAAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000584437.5
CDS-3UTR GCA 90 bp CTTGTCCACTCAGTGAGGCCAGACTTGTGCTCTAATCCACTCTCCTGTGGGTCCGGAAAAGAACATTTATaGTTCCGTTTCAGAAAGCCA +
Preference number: 4 (lower is better)
Translates to: LVHSVRPDLCSNPLSCGSGKEHL*FRFRKP
Trigger: TGGCTTTCTGAAACGGAAGCATAAATGTTCTTTTCC...GGACCCACAGGAGAGTGGATTAGAGCACAAGTCTGGCCTCACTGAGTGGACAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000584437.5
CDS-3UTR GCA 90 bp AGAACTCTTTGTTGTCCCCGCTCAGCTGTAATTCTGCCTTTTCTACCTTCATTCGGGGGTCAAAGTCACTaGTTAGGGAGCTGCAGAAAG +
Preference number: 4 (lower is better)
Translates to: RTLCCPRSAVILPFLPSFGGQSH*LGSCRK
Trigger: CTTTCTGCAGCTCCCTAAGCAGTGACTTTGACCCCC...GAATGAAGGTAGAAAAGGCAGAATTACAGCTGAGCGGGGACAACAAAGAGTTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR GCA 90 bp AAGAACTCTTTGTTGTCCCCGCTCAGCTGTAATTCTGCCTTTTCTACCTTCATTCCAGGCTTCCTGCCATaGCACTGGAACCGCTTTTTG +
Preference number: 4 (lower is better)
Translates to: KNSLLSPLSCNSAFSTFIPGFLP*HWNRFL
Trigger: CAAAAAGCGGTTCCAGTGGCATGGCAGGAAGCCTGG...AATGAAGGTAGAAAAGGCAGAATTACAGCTGAGCGGGGACAACAAAGAGTTCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR GCA 90 bp AGGCAGCAGCTGGTTGCCTGGCTGGACATGGATTTGCTGCACTGCAGATGTTTTAAAAAGAATGGTGTTTaGTGTGGTCCTTTCCTTTCC +
Preference number: 4 (lower is better)
Translates to: RQQLVAWLDMDLLHCRCFKKNGV*CGPFLS
Trigger: GGAAAGGAAAGGACCACAGCAAACACCATTCTTTTT...AAAACATCTGCAGTGCAGCAAATCCATGTCCAGCCAGGCAACCAGCTGCTGCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR GCA 90 bp AGCAGCTGGTTGCCTGGCTGGACATGGATTTGCTGCACTGCAGATGTTTTCTGCAAAAAGAATGGTGTTTaGTGTGGTCCTTTCCTTTCC +
Preference number: 4 (lower is better)
Translates to: SSWLPGWTWICCTADVFCKKNGV*CGPFLS
Trigger: GGAAAGGAAAGGACCACAGCAAACACCATTCTTTTT...GCAGAAAACATCTGCAGTGCAGCAAATCCATGTCCAGCCAGGCAACCAGCTGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR GCA 90 bp TCCTTCCTCTGCCCAGATAAAGTCCAGCAGAAATTCCTCCTTTCTACCTCTCTGACTGCAGATGTTTTCTaGAGACAAGGTCTGGAGCTG +
Preference number: 4 (lower is better)
Translates to: SFLCPDKVQQKFLLSTSLTADVF*RQGLEL
Trigger: CAGCTCCAGACCTTGTCTGCAGAAAACATCTGCAGT...CAGAGAGGTAGAAAGGAGGAATTTCTGCTGGACTTTATCTGGGCAGAGGAAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR GCA 90 bp AAACTTTTCCCAGAGAAGAACTCTTTGTTGTCCCCGCTCAGCTGTAATTCTGCCGTGAGGCCAGACTTGTaGTCTAATCCACTCTCCTGT +
Preference number: 4 (lower is better)
Translates to: KLFPEKNSLLSPLSCNSAVRPDL*SNPLSC
Trigger: ACAGGAGAGTGGATTAGAGCACAAGTCTGGCCTCAC...GGCAGAATTACAGCTGAGCGGGGACAACAAAGAGTTCTTCTCTGGGAAAAGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR GCA 90 bp AGTCCTCTTCCAGTGCTTCTAGGAAGTACGGCAAAAAGAATGGTGTTTGCTGTGGTGAGGCCAGACTTGTaGTCTAATCCACTCTCCTGT +
Preference number: 4 (lower is better)
Translates to: SPLPVLLGSTAKRMVFAVVRPDL*SNPLSC
Trigger: ACAGGAGAGTGGATTAGAGCACAAGTCTGGCCTCAC...CACAGCAAACACCATTCTTTTTGCCGTACTTCCTAGAAGCACTGGAAGAGGACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR GCA 90 bp AAAAGGTTCCCAGGTGGGGTCCTCTGCCCACTTTGCCACCACATTCACATTCCAATTTCAAAAGAAATCTaGAAACCTGTTGCGCTGTCG +
Preference number: 4 (lower is better)
Translates to: KRFPGGVLCPLCHHIHIPISKEI*KPVALS
Trigger: CGACAGCGCAACAGGTTTGCAGATTTCTTTTGAAAT...TGGAATGTGAATGTGGTGGCAAAGTGGGCAGAGGACCCCACCTGGGAACCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000584437.5
CDS-3UTR GCA 90 bp GGAGCTGGGCCTCTGGGCTGTCCAAACCCAAGGGTCACACTTTGCTTTTCCTTTGGCACTATGAAAATTTaGGTCTTTGTACAAACACAG +
Preference number: 4 (lower is better)
Translates to: GAGPLGCPNPRVTLCFSFGTMKI*VFVQTQ
Trigger: CTGTGTTTGTACAAAGACGCAAATTTTCATAGTGCC...AAAGGAAAAGCAAAGTGTGACCCTTGGGTTTGGACAGCCCAGAGGCCCAGCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000584437.5
CDS-3UTR CCA 90 bp GAGGGAGGTGATAAGGTGTCATGCGTTCTGCTGAACCCACTGGCTGGTATGAACAGTATCTCTGAATCATaGATGGACTTGGAAAGTTCG +
Preference number: 4 (lower is better)
Translates to: EGGDKVSCVLLNPLAGMNSISES*MDLESS
Trigger: CGAACTTTCCAAGTCCATCCATGATTCAGAGATACT...GTTCATACCAGCCAGTGGGTTCAGCAGAACGCATGACACCTTATCACCTCCCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000584437.5
CDS-3UTR CCA 90 bp CTTTGTTGTCCCCGCTCAGCTGTAATTCTGCCTTTTCTACCTTCATTCCATCCTGATTGTCGTCATCACTaGCATTGCACAGGTACAGCG +
Preference number: 4 (lower is better)
Translates to: LCCPRSAVILPFLPSFHPDCRHH*HCTGTA
Trigger: CGCTGTACCTGTGCAATGCCAGTGATGACGACAATC...AGGATGGAATGAAGGTAGAAAAGGCAGAATTACAGCTGAGCGGGGACAACAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000584437.5
CDS-3UTR CCA 90 bp TCCTTCCTCTGCCCAGATAAAGTCCAGCAGAAATTCCTCCTTTCTACCTCTCTGTTACGATGGAACTCATaGAGGCAGGAAATGACCCGT +
Preference number: 4 (lower is better)
Translates to: SFLCPDKVQQKFLLSTSLLRWNS*RQEMTR
Trigger: ACGGGTCATTTCCTGCCTCCATGAGTTCCATCGTAA...CAGAGAGGTAGAAAGGAGGAATTTCTGCTGGACTTTATCTGGGCAGAGGAAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp TCCTTCCTCTGCCCAGATAAAGTCCAGCAGAAATTCCTCCTTTCTACCTCTCTGTCCACACAGTTACGATaGAACTCATGGAGGCAGGAA +
Preference number: 4 (lower is better)
Translates to: SFLCPDKVQQKFLLSTSLSTQLR*NSWRQE
Trigger: TTCCTGCCTCCATGAGTTCCATCGTAACTGTGTGGA...CAGAGAGGTAGAAAGGAGGAATTTCTGCTGGACTTTATCTGGGCAGAGGAAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp TCCTTCCTCTGCCCAGATAAAGTCCAGCAGAAATTCCTCCTTTCTACCTCTCTGGTGGAGTCTTCGACCTaGTTCTTGGTAAGATCGAGA +
Preference number: 4 (lower is better)
Translates to: SFLCPDKVQQKFLLSTSLVESST*FLVRSR
Trigger: TCTCGATCTTACCAAGAACCAGGTCGAAGACTCCAC...CAGAGAGGTAGAAAGGAGGAATTTCTGCTGGACTTTATCTGGGCAGAGGAAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp GAGCAGCACCTTTGTAACACCTGGCTACCCATAGCTAGCTTTCTGCCCTCAAAACACCTTTGTAACACCTaGCTACCCATAGCTAGCTTT +
Preference number: 4 (lower is better)
Translates to: EQHLCNTWLPIASFLPSKHLCNT*LPIASF
Trigger: AAAGCTAGCTATGGGTAGCCAGGTGTTACAAAGGTG...TTTTGAGGGCAGAAAGCTAGCTATGGGTAGCCAGGTGTTACAAAGGTGCTGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp TCCTTCCTCTGCCCAGATAAAGTCCAGCAGAAATTCCTCCTTTCTACCTCTCTGAAACCAAGTAGGGGTTaGAGAAGGAGCAGCACCTTT +
Preference number: 4 (lower is better)
Translates to: SFLCPDKVQQKFLLSTSLKPSRG*RRSSTF
Trigger: AAAGGTGCTGCTCCTTCTCCAACCCCTACTTGGTTT...CAGAGAGGTAGAAAGGAGGAATTTCTGCTGGACTTTATCTGGGCAGAGGAAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp TGGCTGGACATGGATTTGCTGCACTGCAGATGTTTTCTGCAGACAAGGTCTGGATCCTTTCTACCTCTCTaGGACTCTGAGACAGGAAAT +
Preference number: 4 (lower is better)
Translates to: WLDMDLLHCRCFLQTRSGSFLPL*DSETGN
Trigger: ATTTCCTGTCTCAGAGTCCCAGAGAGGTAGAAAGGA...TCCAGACCTTGTCTGCAGAAAACATCTGCAGTGCAGCAAATCCATGTCCAGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp CTTGTCCACTCAGTGAGGCCAGACTTGTGCTCTAATCCACTCTCCTGTGGGTCCATTCAAGCGTCTGTCTaGTTCAGATATAAATACCCA +
Preference number: 4 (lower is better)
Translates to: LVHSVRPDLCSNPLSCGSIQASV*FRYKYP
Trigger: TGGGTATTTATATCTGAACCAGACAGACGCTTGAAT...GGACCCACAGGAGAGTGGATTAGAGCACAAGTCTGGCCTCACTGAGTGGACAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp CACTGCAGATGTTTTCTGCAGACAAGGTCTGGAGCTGGAGCAGGAAACGGCACCATTCAAGCGTCTGTCTaGTTCAGATATAAATACCCA +
Preference number: 4 (lower is better)
Translates to: HCRCFLQTRSGAGAGNGTIQASV*FRYKYP
Trigger: TGGGTATTTATATCTGAACCAGACAGACGCTTGAAT...GGTGCCGTTTCCTGCTCCAGCTCCAGACCTTGTCTGCAGAAAACATCTGCAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp AAAGCTGGTGTTCAGAGCTCACCCAAGGAGGGAGGTGATAAGGTGTCATGCGTTTCAGAAAGACAATTCTaGATCAACTCCCTAGAGCAG +
Preference number: 4 (lower is better)
Translates to: KAGVQSSPKEGGDKVSCVSERQF*INSLEQ
Trigger: CTGCTCTAGGGAGTTGATCCAGAATTGTCTTTCTGA...AACGCATGACACCTTATCACCTCCCTCCTTGGGTGAGCTCTGAACACCAGCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577716.5
CDS-3UTR TCA 90 bp TCCTTCCTCTGCCCAGATAAAGTCCAGCAGAAATTCCTCCTTTCTACCTCTCTGTGGATTTTTGCAAGTTaGACAGACTGCTGGTACTGG +
Preference number: 4 (lower is better)
Translates to: SFLCPDKVQQKFLLSTSLWIFAS*TDCWYW
Trigger: CCAGTACCAGCAGTCTGTTCAACTTGCAAAAATCCA...CAGAGAGGTAGAAAGGAGGAATTTCTGCTGGACTTTATCTGGGCAGAGGAAGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR TCA 90 bp AAGAACTCTTTGTTGTCCCCGCTCAGCTGTAATTCTGCCTTTTCTACCTTCATTCTCTTGTCCACTCAGTaGGGCCAGACTTGTGCTCTA +
Preference number: 4 (lower is better)
Translates to: KNSLLSPLSCNSAFSTFILLSTQ*GQTCAL
Trigger: TAGAGCACAAGTCTGGCCTCACTGAGTGGACAAGAG...AATGAAGGTAGAAAAGGCAGAATTACAGCTGAGCGGGGACAACAAAGAGTTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR GCA 90 bp TGGCTGGACATGGATTTGCTGCACTGCAGATGTTTTCTGCAGACAAGGTCTGGATACCAGCTGCAGCAATaGACTTCAACCATACATACT +
Preference number: 4 (lower is better)
Translates to: WLDMDLLHCRCFLQTRSGYQLQQ*TSTIHT
Trigger: AGTATGTATGGTTGAAGTGCATTGCTGCAGCTGGTA...TCCAGACCTTGTCTGCAGAAAACATCTGCAGTGCAGCAAATCCATGTCCAGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR GCA 90 bp AGAACTCTTTGTTGTCCCCGCTCAGCTGTAATTCTGCCTTTTCTACCTTCATTCCTGCCAGGTACCCACTaGGTTCTGTGCAATAGCTTT +
Preference number: 4 (lower is better)
Translates to: RTLCCPRSAVILPFLPSFLPGTH*VLCNSF
Trigger: AAAGCTATTGCACAGAACGCAGTGGGTACCTGGCAG...GAATGAAGGTAGAAAAGGCAGAATTACAGCTGAGCGGGGACAACAAAGAGTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR GCA 90 bp GGTGATAAGGTGTCATGCGTTCTGCTGAACCCACTGGCTGGTATGAACATGAGGAAAAAGAATGGTGTTTaGTGTGGTCCTTTCCTTTCC +
Preference number: 4 (lower is better)
Translates to: GDKVSCVLLNPLAGMNMRKKNGV*CGPFLS
Trigger: GGAAAGGAAAGGACCACAGCAAACACCATTCTTTTT...CCTCATGTTCATACCAGCCAGTGGGTTCAGCAGAACGCATGACACCTTATCACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR GCA 90 bp CTTTGTTGTCCCCGCTCAGCTGTAATTCTGCCTTTTCTACCTTCATTCCATCCTACTGCAGATGTTTTCTaGAGACAAGGTCTGGAGCTG +
Preference number: 4 (lower is better)
Translates to: LCCPRSAVILPFLPSFHPTADVF*RQGLEL
Trigger: CAGCTCCAGACCTTGTCTGCAGAAAACATCTGCAGT...AGGATGGAATGAAGGTAGAAAAGGCAGAATTACAGCTGAGCGGGGACAACAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp GGTGATAAGGTGTCATGCGTTCTGCTGAACCCACTGGCTGGTATGAACATGAGGTTATGTCAGATCACTTaGCATTGCTCTTCCATATGC +
Preference number: 4 (lower is better)
Translates to: GDKVSCVLLNPLAGMNMRLCQIT*HCSSIC
Trigger: GCATATGGAAGAGCAATGCCAAGTGATCTGACATAA...CCTCATGTTCATACCAGCCAGTGGGTTCAGCAGAACGCATGACACCTTATCACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000407977.7
ENST00000584437.5
CDS-3UTR CCA 90 bp CTTTGTTGTCCCCGCTCAGCTGTAATTCTGCCTTTTCTACCTTCATTCCATCCTAAAAATCTGGCAAGCTaGGTGCACAGTTGCATCCTG +
Preference number: 4 (lower is better)
Translates to: LCCPRSAVILPFLPSFHPKNLAS*VHSCIL
Trigger: CAGGATGCAACTGTGCACCCAGCTTGCCAGATTTTT...AGGATGGAATGAAGGTAGAAAAGGCAGAATTACAGCTGAGCGGGGACAACAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp AGTCCTCTTCCAGTGCTTCTAGGAAGTACGGCAAAAAGAATGGTGTTTGCTGTGGAATGGTGTTTGCTGTaGTCCTTTCCTTTCCCAGGA +
Preference number: 4 (lower is better)
Translates to: SPLPVLLGSTAKRMVFAVEWCLL*SFPFPG
Trigger: TCCTGGGAAAGGAAAGGACCACAGCAAACACCATTC...CACAGCAAACACCATTCTTTTTGCCGTACTTCCTAGAAGCACTGGAAGAGGACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp AAGAACTCTTTGTTGTCCCCGCTCAGCTGTAATTCTGCCTTTTCTACCTTCATTGCTGAACCCACTGGCTaGTATGAACATGAGGCTTGG +
Preference number: 4 (lower is better)
Translates to: KNSLLSPLSCNSAFSTFIAEPTG*YEHEAW
Trigger: CCAAGCCTCATGTTCATACCAGCCAGTGGGTTCAGC...AATGAAGGTAGAAAAGGCAGAATTACAGCTGAGCGGGGACAACAAAGAGTTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp AAGAACTCTTTGTTGTCCCCGCTCAGCTGTAATTCTGCCTTTTCTACCTTCATTTCTCCTGTGGGTCCCTaGCCTGTATGGCTTATACTG +
Preference number: 4 (lower is better)
Translates to: KNSLLSPLSCNSAFSTFISPVGP*PVWLIL
Trigger: CAGTATAAGCCATACAGGCCAGGGACCCACAGGAGA...AATGAAGGTAGAAAAGGCAGAATTACAGCTGAGCGGGGACAACAAAGAGTTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp AAGAACTCTTTGTTGTCCCCGCTCAGCTGTAATTCTGCCTTTTCTACCTTCATTAAAAAGGTTCCCAGGTaGGGTCCTCTGCCCACTTTG +
Preference number: 4 (lower is better)
Translates to: KNSLLSPLSCNSAFSTFIKKVPR*GPLPTL
Trigger: CAAAGTGGGCAGAGGACCCCACCTGGGAACCTTTTT...AATGAAGGTAGAAAAGGCAGAATTACAGCTGAGCGGGGACAACAAAGAGTTCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp ACCAAGGCTGCTGTACCCACCTCAGGGACAGAACTCCACACTATAGTGGGAAAGATTCAAGCGTCTGTCTaGTTCAGATATAAATACCCA +
Preference number: 4 (lower is better)
Translates to: TKAAVPTSGTELHTIVGKIQASV*FRYKYP
Trigger: TGGGTATTTATATCTGAACCAGACAGACGCTTGAAT...CTTTCCCACTATAGTGTGGAGTTCTGTCCCTGAGGTGGGTACAGCAGCCTTGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR TCA 90 bp AAGAACTCTTTGTTGTCCCCGCTCAGCTGTAATTCTGCCTTTTCTACCTTCATTACCTCTCTGGGACTCTaGGACAGGAAATCTTCAAGG +
Preference number: 4 (lower is better)
Translates to: KNSLLSPLSCNSAFSTFITSLGL*DRKSSR
Trigger: CCTTGAAGATTTCCTGTCTCAGAGTCCCAGAGAGGT...AATGAAGGTAGAAAAGGCAGAATTACAGCTGAGCGGGGACAACAAAGAGTTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR GCA 90 bp AAGAACTCTTTGTTGTCCCCGCTCAGCTGTAATTCTGCCTTTTCTACCTTCATTCATACTACAGGTAGGTaGCGAGAAATTCCGCAGCCT +
Preference number: 4 (lower is better)
Translates to: KNSLLSPLSCNSAFSTFIHTTGR*REIPQP
Trigger: AGGCTGCGGAATTTCTCGGCACCTACCTGTAGTATG...AATGAAGGTAGAAAAGGCAGAATTACAGCTGAGCGGGGACAACAAAGAGTTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000584437.5
CDS-3UTR GCA 90 bp AAGAACTCTTTGTTGTCCCCGCTCAGCTGTAATTCTGCCTTTTCTACCTTCATTGTCCTCTGCCCACTTTaGCACCACATTCACATTCCA +
Preference number: 4 (lower is better)
Translates to: KNSLLSPLSCNSAFSTFIVLCPL*HHIHIP
Trigger: TGGAATGTGAATGTGGTGGCAAAGTGGGCAGAGGAC...AATGAAGGTAGAAAAGGCAGAATTACAGCTGAGCGGGGACAACAAAGAGTTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR GCA 90 bp CTTTGTTGTCCCCGCTCAGCTGTAATTCTGCCTTTTCTACCTTCATTCCATCCTCCATATGCATCAAGTTaGCAGGCACTAAACCCAATG +
Preference number: 4 (lower is better)
Translates to: LCCPRSAVILPFLPSFHPPYASS*QALNPM
Trigger: CATTGGGTTTAGTGCCTGGCAACTTGATGCATATGG...AGGATGGAATGAAGGTAGAAAAGGCAGAATTACAGCTGAGCGGGGACAACAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000584437.5
CDS-3UTR CCA 90 bp CTTTGTTGTCCCCGCTCAGCTGTAATTCTGCCTTTTCTACCTTCATTCCATCCTAAGGATATGCCACACTaGGGGTGTAATGGGGAAAAA +
Preference number: 4 (lower is better)
Translates to: LCCPRSAVILPFLPSFHPKDMPH*GCNGEK
Trigger: TTTTTCCCCATTACACCCCCAGTGTGGCATATCCTT...AGGATGGAATGAAGGTAGAAAAGGCAGAATTACAGCTGAGCGGGGACAACAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp CTTTGTTGTCCCCGCTCAGCTGTAATTCTGCCTTTTCTACCTTCATTCCATCCTCACCTTTGTAACACCTaGCTACCCATAGCTAGCTTT +
Preference number: 4 (lower is better)
Translates to: LCCPRSAVILPFLPSFHPHLCNT*LPIASF
Trigger: AAAGCTAGCTATGGGTAGCCAGGTGTTACAAAGGTG...AGGATGGAATGAAGGTAGAAAAGGCAGAATTACAGCTGAGCGGGGACAACAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR TCA 90 bp CTTTGTTGTCCCCGCTCAGCTGTAATTCTGCCTTTTCTACCTTCATTCCATCCTTGGAATCCACGGGGGTaGAACAAATTCAATTATGCT +
Preference number: 4 (lower is better)
Translates to: LCCPRSAVILPFLPSFHPWNPRG*NKFNYA
Trigger: AGCATAATTGAATTTGTTTCACCCCCGTGGATTCCA...AGGATGGAATGAAGGTAGAAAAGGCAGAATTACAGCTGAGCGGGGACAACAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000584437.5
CDS-3UTR TCA 90 bp AAACTTTTCCCAGAGAAGAACTCTTTGTTGTCCCCGCTCAGCTGTAATTCTGCCTGGAATCCACGGGGGTaGAACAAATTCAATTATGCT +
Preference number: 4 (lower is better)
Translates to: KLFPEKNSLLSPLSCNSAWNPRG*NKFNYA
Trigger: AGCATAATTGAATTTGTTTCACCCCCGTGGATTCCA...GGCAGAATTACAGCTGAGCGGGGACAACAAAGAGTTCTTCTCTGGGAAAAGTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000584437.5
CDS-3UTR GCA 90 bp CTTTGTTGTCCCCGCTCAGCTGTAATTCTGCCTTTTCTACCTTCATTCCATCCTCAGATCACTTGGCATTaGTCTTCCATATGCATCAAG +
Preference number: 4 (lower is better)
Translates to: LCCPRSAVILPFLPSFHPQITWH*SSICIK
Trigger: CTTGATGCATATGGAAGAGCAATGCCAAGTGATCTG...AGGATGGAATGAAGGTAGAAAAGGCAGAATTACAGCTGAGCGGGGACAACAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000407977.7
ENST00000584437.5
CDS-3UTR GCA 90 bp GAGCAGCACCTTTGTAACACCTGGCTACCCATAGCTAGCTTTCTGCCCTCAAAAGGAAAAGAACATTTATaGTTCCGTTTCAGAAAGCCA +
Preference number: 4 (lower is better)
Translates to: EQHLCNTWLPIASFLPSKGKEHL*FRFRKP
Trigger: TGGCTTTCTGAAACGGAAGCATAAATGTTCTTTTCC...TTTTGAGGGCAGAAAGCTAGCTATGGGTAGCCAGGTGTTACAAAGGTGCTGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000584437.5
CDS-3UTR GCA 90 bp AAACTTTTCCCAGAGAAGAACTCTTTGTTGTCCCCGCTCAGCTGTAATTCTGCCTACCAGCTGCAGCAATaGACTTCAACCATACATACT +
Preference number: 4 (lower is better)
Translates to: KLFPEKNSLLSPLSCNSAYQLQQ*TSTIHT
Trigger: AGTATGTATGGTTGAAGTGCATTGCTGCAGCTGGTA...GGCAGAATTACAGCTGAGCGGGGACAACAAAGAGTTCTTCTCTGGGAAAAGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR GCA 90 bp TCCTTCCTCTGCCCAGATAAAGTCCAGCAGAAATTCCTCCTTTCTACCTCTCTGAAAAAGAATGGTGTTTaGTGTGGTCCTTTCCTTTCC +
Preference number: 4 (lower is better)
Translates to: SFLCPDKVQQKFLLSTSLKKNGV*CGPFLS
Trigger: GGAAAGGAAAGGACCACAGCAAACACCATTCTTTTT...CAGAGAGGTAGAAAGGAGGAATTTCTGCTGGACTTTATCTGGGCAGAGGAAGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp TCCTTCCTCTGCCCAGATAAAGTCCAGCAGAAATTCCTCCTTTCTACCTCTCTGAGTATCTCTGAATCATaGATGGACTTGGAAAGTTCG +
Preference number: 4 (lower is better)
Translates to: SFLCPDKVQQKFLLSTSLSISES*MDLESS
Trigger: CGAACTTTCCAAGTCCATCCATGATTCAGAGATACT...CAGAGAGGTAGAAAGGAGGAATTTCTGCTGGACTTTATCTGGGCAGAGGAAGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000584437.5
CDS-3UTR CCA 90 bp AAGAACTCTTTGTTGTCCCCGCTCAGCTGTAATTCTGCCTTTTCTACCTTCATTTTACGATGGAACTCATaGAGGCAGGAAATGACCCGT +
Preference number: 4 (lower is better)
Translates to: KNSLLSPLSCNSAFSTFILRWNS*RQEMTR
Trigger: ACGGGTCATTTCCTGCCTCCATGAGTTCCATCGTAA...AATGAAGGTAGAAAAGGCAGAATTACAGCTGAGCGGGGACAACAAAGAGTTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CCA 90 bp CTTTGTTGTCCCCGCTCAGCTGTAATTCTGCCTTTTCTACCTTCATTCCATCCTGTACGGCAAAAAGAATaGTGTTTGCTGTGGTCCTTT +
Preference number: 4 (lower is better)
Translates to: LCCPRSAVILPFLPSFHPVRQKE*CLLWSF
Trigger: AAAGGACCACAGCAAACACCATTCTTTTTGCCGTAC...AGGATGGAATGAAGGTAGAAAAGGCAGAATTACAGCTGAGCGGGGACAACAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR GCA 90 bp AAGAACTCTTTGTTGTCCCCGCTCAGCTGTAATTCTGCCTTTTCTACCTTCATTCGGAAGGATTCCGAGTaGTTCCTTTCAGAAAGACAA +
Preference number: 4 (lower is better)
Translates to: KNSLLSPLSCNSAFSTFIRKDSE*FLSERQ
Trigger: TTGTCTTTCTGAAAGGAAGCACTCGGAATCCTTCCG...AATGAAGGTAGAAAAGGCAGAATTACAGCTGAGCGGGGACAACAAAGAGTTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000584437.5
CDS-3UTR CCA 90 bp CTTTGTTGTCCCCGCTCAGCTGTAATTCTGCCTTTTCTACCTTCATTCCATCCTAGTATCTCTGAATCATaGATGGACTTGGAAAGTTCG +
Preference number: 4 (lower is better)
Translates to: LCCPRSAVILPFLPSFHPSISES*MDLESS
Trigger: CGAACTTTCCAAGTCCATCCATGATTCAGAGATACT...AGGATGGAATGAAGGTAGAAAAGGCAGAATTACAGCTGAGCGGGGACAACAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000584437.5
CDS-3UTR CCA 90 bp TCCTTCCTCTGCCCAGATAAAGTCCAGCAGAAATTCCTCCTTTCTACCTCTCTGATTCAAGCGTCTGTCTaGTTCAGATATAAATACCCA +
Preference number: 4 (lower is better)
Translates to: SFLCPDKVQQKFLLSTSLIQASV*FRYKYP
Trigger: TGGGTATTTATATCTGAACCAGACAGACGCTTGAAT...CAGAGAGGTAGAAAGGAGGAATTTCTGCTGGACTTTATCTGGGCAGAGGAAGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR TCA 90 bp AAGAACTCTTTGTTGTCCCCGCTCAGCTGTAATTCTGCCTTTTCTACCTTCATTAGAAATTCCGCAGCCTaGAAAAATAATCCATGCAGG +
Preference number: 4 (lower is better)
Translates to: KNSLLSPLSCNSAFSTFIRNSAA*KNNPCR
Trigger: CCTGCATGGATTATTTTTTCAGGCTGCGGAATTTCT...AATGAAGGTAGAAAAGGCAGAATTACAGCTGAGCGGGGACAACAAAGAGTTCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000584437.5
CDS-3UTR GCA 90 bp AAGAACTCTTTGTTGTCCCCGCTCAGCTGTAATTCTGCCTTTTCTACCTTCATTCTAGCTAATACCAAATaGAGGTTCTCAGATCCAGAC +
Preference number: 4 (lower is better)
Translates to: KNSLLSPLSCNSAFSTFILANTK*RFSDPD
Trigger: GTCTGGATCTGAGAACCTGCATTTGGTATTAGCTAG...AATGAAGGTAGAAAAGGCAGAATTACAGCTGAGCGGGGACAACAAAGAGTTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000584437.5
CDS-3UTR CCA 90 bp AAGAACTCTTTGTTGTCCCCGCTCAGCTGTAATTCTGCCTTTTCTACCTTCATTAATCATGGATGGACTTaGAAAGTTCGGAAGGATTCC +
Preference number: 4 (lower is better)
Translates to: KNSLLSPLSCNSAFSTFINHGWT*KVRKDS
Trigger: GGAATCCTTCCGAACTTTCCAAGTCCATCCATGATT...AATGAAGGTAGAAAAGGCAGAATTACAGCTGAGCGGGGACAACAAAGAGTTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000584437.5
CDS CCA 90 bp AGGGCCCATGCCTGGCTCCTGGGATGGCAGGAAGGGACCAGGTCGTaGGGGCCGAGCCACTGCACTCCGGGAAGGGCCCAACAGGTAGGC +
Preference number: 5 (lower is better)
Translates to: RAHAWLLGWQEGTRS*GPSHCTPGRAQQVG
Trigger: GCCTACCTGTTGGGCCCTTCCCGGAGTGCAGTGGCTCGGCCCCCACGACCTGGTCCCTTCCTGCCATCCCAGGAGCCAGGCATGGGCCCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000407977.7
ENST00000577625.5
ENST00000577716.5
ENST00000581868.1
ENST00000583753.5
ENST00000584437.5
CDS CCA 90 bp TCTGGGGAAGCGGTGATGCCGAGGGCCCATGCCTGGCTCCTGGGATaGCAGGAAGGGACCAGGTCGTGGGGGCCGAGCCACTGCACTCCG +
Preference number: 5 (lower is better)
Translates to: SGEAVMPRAHAWLLG*QEGTRSWGPSHCTP
Trigger: CGGAGTGCAGTGGCTCGGCCCCCACGACCTGGTCCCTTCCTGCCATCCCAGGAGCCAGGCATGGGCCCTCGGCATCACCGCTTCCCCAGA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000407977.7
ENST00000577625.5
ENST00000577716.5
ENST00000581868.1
ENST00000583753.5
ENST00000584437.5
CDS CCA 90 bp GGGATGTGCAGCTCTGGGGAAGCGGTGATGCCGAGGGCCCATGCCTaGCTCCTGGGATGGCAGGAAGGGACCAGGTCGTGGGGGCCGAGC +
Preference number: 5 (lower is better)
Translates to: GMCSSGEAVMPRAHA*LLGWQEGTRSWGPS
Trigger: GCTCGGCCCCCACGACCTGGTCCCTTCCTGCCATCCCAGGAGCCAGGCATGGGCCCTCGGCATCACCGCTTCCCCAGAGCTGCACATCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000407977.7
ENST00000577625.5
ENST00000577716.5
ENST00000581868.1
ENST00000583753.5
ENST00000584437.5
CDS CCA 90 bp CTCCCTGAGTCTGGCCACTCACCCCGGGCCTGCCTGCAGCTGGCCTaGTACCTCCTGGTGGCCAGCTGGCTGATGGCCCAGGCTGTTCTC +
Preference number: 5 (lower is better)
Translates to: LPESGHSPRACLQLA*YLLVASWLMAQAVL
Trigger: GAGAACAGCCTGGGCCATCAGCCAGCTGGCCACCAGGAGGTACCAGGCCAGCTGCAGGCAGGCCCGGGGTGAGTGGCCAGACTCAGGGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000407977.7
ENST00000577625.5
ENST00000577716.5
ENST00000581868.1
ENST00000583753.5
ENST00000584437.5
CDS GCA 90 bp TCCACCGCTGCTGCCAGTACCAGTCCTGTGCGTCCAAAGCCTGCCTaGAGGGTAGCCATCAGCAGCCAGGGCCAGAGGGCAGCCAGCTGC +
Preference number: 5 (lower is better)
Translates to: STAAASTSPVRPKPA*RVAISSQGQRAASC
Trigger: GCAGCTGGCTGCCCTCTGGCCCTGGCTGCTGATGGCTACCCTGCAGGCAGGCTTTGGACGCACAGGACTGGTACTGGCAGCAGCGGTGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS GCA 90 bp GCCTGCAGGGTAGCCATCAGCAGCCAGGGCCAGAGGGCAGCCAGCTaGAGCTGGTGGCCACCACTCATGCTACCAGCTGCAGCAATGCAC +
Preference number: 5 (lower is better)
Translates to: ACRVAISSQGQRAAS*SWWPPLMLPAAAMH
Trigger: GTGCATTGCTGCAGCTGGTAGCATGAGTGGTGGCCACCAGCTGCAGCTGGCTGCCCTCTGGCCCTGGCTGCTGATGGCTACCCTGCAGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS GCA 90 bp CAGGCTGGGCCGACAGCACCTGGCAGTGCGGATAAGGGCATGGCCTaGCCTCTGCGGTGTCAGAACTCCATTCAGAAGGCCCCTCCCCAG +
Preference number: 5 (lower is better)
Translates to: QAGPTAPGSADKGMA*PLRCQNSIQKAPPQ
Trigger: CTGGGGAGGGGCCTTCTGAATGGAGTTCTGACACCGCAGAGGGCAGGCCATGCCCTTATCCGCACTGCCAGGTGCTGTCGGCCCAGCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000407977.7
ENST00000577625.5
ENST00000577716.5
ENST00000581868.1
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CAA 90 bp GAGGGGCCAAGAGTGGTCAGGCTGCCCTGGGGTGAATGTCACCCTGATGAGGCCGCTCAGTCCCCAGCCTaGTGCATAGGGGTGCTGGGC +
Preference number: 5 (lower is better)
Translates to: EGPRVVRLPWGECHPDEAAQSPA*CIGVLG
Trigger: GCCCAGCACCCCTATGCACAAGGCTGGGGACTGAGC...GGCCTCATCAGGGTGACATTCACCCCAGGGCAGCCTGACCACTCTTGGCCCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS TCA 90 bp GCCCCAGCGGCTGCTGCAGCTGCTCAGCAGCAGCTCGATCCTCAGTaGTGTCAAAGAGGACAGCACTGGCTCCTCGCTCACCCGCCATCC +
Preference number: 5 (lower is better)
Translates to: APAAAAAAQQQLDPQ*CQRGQHWLLAHPPS
Trigger: GGATGGCGGGTGAGCGAGGAGCCAGTGCTGTCCTCTTTGACATCACTGAGGATCGAGCTGCTGCTGAGCAGCTGCAGCAGCCGCTGGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000407977.7
ENST00000577625.5
ENST00000577716.5
ENST00000581868.1
ENST00000583753.5
ENST00000584437.5
CDS GCA 90 bp GGCCGACAGCACCTGGCAGTGCGGATAAGGGCATGGCCTGCCCTCTaGGGTGTCAGAACTCCATTCAGAAGGCCCCTCCCCAGGTGGATG +
Preference number: 5 (lower is better)
Translates to: GRQHLAVRIRAWPAL*GVRTPFRRPLPRWM
Trigger: CATCCACCTGGGGAGGGGCCTTCTGAATGGAGTTCTGACACCGCAGAGGGCAGGCCATGCCCTTATCCGCACTGCCAGGTGCTGTCGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000407977.7
ENST00000577625.5
ENST00000577716.5
ENST00000581868.1
ENST00000583753.5
ENST00000584437.5
CDS CCA 90 bp CTCACCAGGCTGGGCCGACAGCACCTGGCAGTGCGGATAAGGGCATaGCCTGCCCTCTGCGGTGTCAGAACTCCATTCAGAAGGCCCCTC +
Preference number: 5 (lower is better)
Translates to: LTRLGRQHLAVRIRA*PALCGVRTPFRRPL
Trigger: GAGGGGCCTTCTGAATGGAGTTCTGACACCGCAGAGGGCAGGCCATGCCCTTATCCGCACTGCCAGGTGCTGTCGGCCCAGCCTGGTGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581868.1
CDS-3UTR CAA 90 bp ACTCAGCCTTCAAGGGATCCAGCCCACACACGCCACAGGCAGCAGCTGGTTGCCGCTCAGTCCCCAGCCTaGTGCATAGGGGTGCTGGGC +
Preference number: 5 (lower is better)
Translates to: TQPSRDPAHTRHRQQLVAAQSPA*CIGVLG
Trigger: GCCCAGCACCCCTATGCACAAGGCTGGGGACTGAGC...GGCAACCAGCTGCTGCCTGTGGCGTGTGTGGGCTGGATCCCTTGAAGGCTGAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS GCA 90 bp CCAGGTACCCACTGCGTTCTGTGCAATAGCTTTCTCCAGATCCACTaGTGTCAGGGGGCCTGGCCCGGCGTAGGGGCACTGGGCAAGCAG +
Preference number: 5 (lower is better)
Translates to: PGTHCVLCNSFLQIH*CQGAWPGVGALGKQ
Trigger: CTGCTTGCCCAGTGCCCCTACGCCGGGCCAGGCCCCCTGACAGCAGTGGATCTGGAGAAAGCTATTGCACAGAACGCAGTGGGTACCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000407977.7
ENST00000577625.5
ENST00000577716.5
ENST00000581868.1
ENST00000583753.5
ENST00000584437.5
CDS CCA 90 bp GTTCTGTGCAATAGCTTTCTCCAGATCCACTGCTGTCAGGGGGCCTaGCCCGGCGTAGGGGCACTGGGCAAGCAGCAGGGTGCTGTGAGG +
Preference number: 5 (lower is better)
Translates to: VLCNSFLQIHCCQGA*PGVGALGKQQGAVR
Trigger: CCTCACAGCACCCTGCTGCTTGCCCAGTGCCCCTACGCCGGGCCAGGCCCCCTGACAGCAGTGGATCTGGAGAAAGCTATTGCACAGAAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000407977.7
ENST00000577625.5
ENST00000577716.5
ENST00000581868.1
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CAA 90 bp GAGGGGCCAAGAGTGGTCAGGCTGCCCTGGGGTGAATGTCACCCTGATGAGGCCTCGTCATCACTGGCATaGCACAGGTACAGCGGGTGG +
Preference number: 5 (lower is better)
Translates to: EGPRVVRLPWGECHPDEASSSLA*HRYSGW
Trigger: CCACCCGCTGTACCTGTGCAATGCCAGTGATGACGA...GGCCTCATCAGGGTGACATTCACCCCAGGGCAGCCTGACCACTCTTGGCCCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000584437.5
CDS GCA 90 bp TGGAGTCACTGGCTGGCCCATCTGCCAGGTACCCACTGCGTTCTGTaGAATAGCTTTCTCCAGATCCACTGCTGTCAGGGGGCCTGGCCC +
Preference number: 5 (lower is better)
Translates to: WSHWLAHLPGTHCVL*NSFLQIHCCQGAWP
Trigger: GGGCCAGGCCCCCTGACAGCAGTGGATCTGGAGAAAGCTATTGCACAGAACGCAGTGGGTACCTGGCAGATGGGCCAGCCAGTGACTCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000407977.7
ENST00000577625.5
ENST00000577716.5
ENST00000581868.1
ENST00000583753.5
ENST00000584437.5
CDS GCA 90 bp GGCACCACCGAGTCCAAGGAACGAGGCCGAGAGGTCACACTAGGCTaGATGTCCACTCGCTGGGGATCCCCTTTAGGGCTGCAGTACACT +
Preference number: 5 (lower is better)
Translates to: GTTESKERGREVTLG*MSTRWGSPLGLQYT
Trigger: AGTGTACTGCAGCCCTAAAGGGGATCCCCAGCGAGTGGACATGCAGCCTAGTGTGACCTCTCGGCCTCGTTCCTTGGACTCGGTGGTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000407977.7
ENST00000577625.5
ENST00000577716.5
ENST00000581868.1
ENST00000583753.5
ENST00000584437.5
CDS TCA 90 bp AGGCAGCAGGGAGGTGGTAGTGGGCATGGCCGGGATGCTGGCGAATaGGGTGGAGTCTTCGACCTGGTTCTTGGTAAGATCGAGAGGGTC +
Preference number: 5 (lower is better)
Translates to: RQQGGGSGHGRDAGE*GGVFDLVLGKIERV
Trigger: GACCCTCTCGATCTTACCAAGAACCAGGTCGAAGACTCCACCTCATTCGCCAGCATCCCGGCCATGCCCACTACCACCTCCCTGCTGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000407977.7
ENST00000577625.5
ENST00000577716.5
ENST00000581868.1
ENST00000583753.5
ENST00000584437.5
CDS CCA 90 bp CAGAGTCACTGGAAGAGCCATGACAGGGCCCTGAGCTGGAGTCACTaGCTGGCCCATCTGCCAGGTACCCACTGCGTTCTGTGCAATAGC +
Preference number: 5 (lower is better)
Translates to: QSHWKSHDRALSWSH*LAHLPGTHCVLCNS
Trigger: GCTATTGCACAGAACGCAGTGGGTACCTGGCAGATGGGCCAGCCAGTGACTCCAGCTCAGGGCCCTGTCATGGCTCTTCCAGTGACTCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000407977.7
ENST00000577625.5
ENST00000577716.5
ENST00000581868.1
ENST00000583753.5
ENST00000584437.5
CDS CCA 90 bp CTGTGTCCGAGGAATAGGAGGCCTGGACTGGGGGACTCCGGTTTCTaGGCCAGGCTTCCTGCCATGCCACTGGAACCGCTTTTTGTAGTG +
Preference number: 5 (lower is better)
Translates to: LCPRNRRPGLGDSGF*ARLPAMPLEPLFVV
Trigger: CACTACAAAAAGCGGTTCCAGTGGCATGGCAGGAAGCCTGGCCCAGAAACCGGAGTCCCCCAGTCCAGGCCTCCTATTCCTCGGACACAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000407977.7
ENST00000577625.5
ENST00000577716.5
ENST00000581868.1
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CAA 90 bp CAGATGTTTTCTGCAGACAAGGTCTGGAGCTGGAGCAGGAAACGGCACCCTCTCCCCGCCATCCGAGCCTaGCTAGCCAGTGACAGGCAG +
Preference number: 5 (lower is better)
Translates to: QMFSADKVWSWSRKRHPLPAIRA*LASDRQ
Trigger: CTGCCTGTCACTGGCTAGCAAGGCTCGGATGGCGGG...GAGAGGGTGCCGTTTCCTGCTCCAGCTCCAGACCTTGTCTGCAGAAAACATCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000584437.5
CDS-3UTR CAA 90 bp ACTGAGGGAAAAAGGTTCCCAGGTGGGGTCCTCTGCCCACTTTGCCACCACATTCCCGCCATCCGAGCCTaGCTAGCCAGTGACAGGCAG +
Preference number: 5 (lower is better)
Translates to: TEGKRFPGGVLCPLCHHIPAIRA*LASDRQ
Trigger: CTGCCTGTCACTGGCTAGCAAGGCTCGGATGGCGGG...AATGTGGTGGCAAAGTGGGCAGAGGACCCCACCTGGGAACCTTTTTCCCTCAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000584437.5
CDS GCA 90 bp GGACAAAGTAGGGCTAAGTGCAGGGCAAGGTCTGGAGGTCTAGTGTaGTTACCCAGGCCGGGGGCTCCTTCAGCTCAATCCTCACATGGG +
Preference number: 5 (lower is better)
Translates to: GQSRAKCRARSGGLV*LPRPGAPSAQSSHG
Trigger: CCCATGTGAGGATTGAGCTGAAGGAGCCCCCGGCCTGGGTAAGCACACTAGACCTCCAGACCTTGCCCTGCACTTAGCCCTACTTTGTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000582293.1
CDS-3UTR CAA 90 bp AGCAGCTGGTTGCCTGGCTGGACATGGATTTGCTGCACTGCAGATGTTTTCTGCAGTTGCCAGGCACTGTaGCGCTGTCGGGCCCACTGG +
Preference number: 5 (lower is better)
Translates to: SSWLPGWTWICCTADVFCSCQAL*RCRAHW
Trigger: CCAGTGGGCCCGACAGCGCAACAGTGCCTGGCAACT...GCAGAAAACATCTGCAGTGCAGCAAATCCATGTCCAGCCAGGCAACCAGCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407977.7
CDS-3UTR CAA 90 bp AGCAGCTGGTTGCCTGGCTGGACATGGATTTGCTGCACTGCAGATGTTTTCTGCCCCGCCATCCGAGCCTaGCTAGCCAGTGACAGGCAG +
Preference number: 5 (lower is better)
Translates to: SSWLPGWTWICCTADVFCPAIRA*LASDRQ
Trigger: CTGCCTGTCACTGGCTAGCAAGGCTCGGATGGCGGG...GCAGAAAACATCTGCAGTGCAGCAAATCCATGTCCAGCCAGGCAACCAGCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000584437.5
CDS-3UTR CAA 90 bp ACCAAGGCTGCTGTACCCACCTCAGGGACAGAACTCCACACTATAGTGGGAAAGGCTCAGTCCCCAGCCTaGTGCATAGGGGTGCTGGGC +
Preference number: 5 (lower is better)
Translates to: TKAAVPTSGTELHTIVGKAQSPA*CIGVLG
Trigger: GCCCAGCACCCCTATGCACAAGGCTGGGGACTGAGC...CTTTCCCACTATAGTGTGGAGTTCTGTCCCTGAGGTGGGTACAGCAGCCTTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CAA 90 bp TGCCCTCAAAAACTCAGCCTTCAAGGGATCCAGCCCACACACGCCACAGGCAGCACAGGCAGCAGCTGGTaGCCTGGCTGGACATGGATT +
Preference number: 5 (lower is better)
Translates to: CPQKLSLQGIQPTHATGSTGSSW*PGWTWI
Trigger: AATCCATGTCCAGCCAGGCAACCAGCTGCTGCCTGT...GCTGCCTGTGGCGTGTGTGGGCTGGATCCCTTGAAGGCTGAGTTTTTGAGGGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CAA 90 bp GAGGGGCCAAGAGTGGTCAGGCTGCCCTGGGGTGAATGTCACCCTGATGAGGCCCCCAAGGGTCACACTTaGCTTTTCCTTTGTTGTCCC +
Preference number: 5 (lower is better)
Translates to: EGPRVVRLPWGECHPDEAPKGHT*LFLCCP
Trigger: GGGACAACAAAGGAAAAGCAAAGTGTGACCCTTGGG...GGCCTCATCAGGGTGACATTCACCCCAGGGCAGCCTGACCACTCTTGGCCCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CAA 90 bp ACTCAGCCTTCAAGGGATCCAGCCCACACACGCCACAGGCAGCAGCTGGTTGCCTCAGTGAGGCCAGACTaGTGCTCTAATCCACTCTCC +
Preference number: 5 (lower is better)
Translates to: TQPSRDPAHTRHRQQLVASVRPD*CSNPLS
Trigger: GGAGAGTGGATTAGAGCACAAGTCTGGCCTCACTGA...GGCAACCAGCTGCTGCCTGTGGCGTGTGTGGGCTGGATCCCTTGAAGGCTGAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS CCA 90 bp AAGGAACGAGGCCGAGAGGTCACACTAGGCTGCATGTCCACTCGCTaGGGATCCCCTTTAGGGCTGCAGTACACTAGGGGGTCAAAGTCA +
Preference number: 5 (lower is better)
Translates to: KERGREVTLGCMSTR*GSPLGLQYTRGSKS
Trigger: TGACTTTGACCCCCTAGTGTACTGCAGCCCTAAAGGGGATCCCCAGCGAGTGGACATGCAGCCTAGTGTGACCTCTCGGCCTCGTTCCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000407977.7
ENST00000577625.5
ENST00000577716.5
ENST00000581868.1
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CAA 90 bp GAGGGGCCAAGAGTGGTCAGGCTGCCCTGGGGTGAATGTCACCCTGATGAGGCCTGGGCCTTTTGGTTCTaGTACACAAACTCCATCAGC +
Preference number: 5 (lower is better)
Translates to: EGPRVVRLPWGECHPDEAWAFWF*YTNSIS
Trigger: GCTGATGGAGTTTGTGTACAAGAACCAAAAGGCCCA...GGCCTCATCAGGGTGACATTCACCCCAGGGCAGCCTGACCACTCTTGGCCCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CAA 90 bp AGGGGCCAAGAGTGGTCAGGCTGCCCTGGGGTGAATGTCACCCTGATGAGGCCCTGGCTGGACATGGATTaGCTGCACTGCAGATGTTTT +
Preference number: 5 (lower is better)
Translates to: RGQEWSGCPGVNVTLMRPWLDMD*LHCRCF
Trigger: AAAACATCTGCAGTGCAGCAAATCCATGTCCAGCCA...GGGCCTCATCAGGGTGACATTCACCCCAGGGCAGCCTGACCACTCTTGGCCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CAA 90 bp TGCCCTCAAAAACTCAGCCTTCAAGGGATCCAGCCCACACACGCCACAGGCAGCGGTCCTCTGCCCACTTaGCCACCACATTCACATTCC +
Preference number: 5 (lower is better)
Translates to: CPQKLSLQGIQPTHATGSGPLPT*PPHSHS
Trigger: GGAATGTGAATGTGGTGGCAAAGTGGGCAGAGGACC...GCTGCCTGTGGCGTGTGTGGGCTGGATCCCTTGAAGGCTGAGTTTTTGAGGGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CAA 90 bp GAGGGAGGTGATAAGGTGTCATGCGTTCTGCTGAACCCACTGGCTGGTATGAACCAGGTAGCATTCCTGTaGCGCTGTCGGGCCCACTGG +
Preference number: 5 (lower is better)
Translates to: EGGDKVSCVLLNPLAGMNQVAFL*RCRAHW
Trigger: CCAGTGGGCCCGACAGCGCAACAGGAATGCTACCTG...GTTCATACCAGCCAGTGGGTTCAGCAGAACGCATGACACCTTATCACCTCCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577716.5
CDS-3UTR CAA 90 bp GAGCAGCACCTTTGTAACACCTGGCTACCCATAGCTAGCTTTCTGCCCTCAAAAGCTCAGTCCCCAGCCTaGTGCATAGGGGTGCTGGGC +
Preference number: 5 (lower is better)
Translates to: EQHLCNTWLPIASFLPSKAQSPA*CIGVLG
Trigger: GCCCAGCACCCCTATGCACAAGGCTGGGGACTGAGC...TTTTGAGGGCAGAAAGCTAGCTATGGGTAGCCAGGTGTTACAAAGGTGCTGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CAA 90 bp AGGGGCCAAGAGTGGTCAGGCTGCCCTGGGGTGAATGTCACCCTGATGAGGCCCCTGGATTTTTGCAAGTaGAACAGACTGCTGGTACTG +
Preference number: 5 (lower is better)
Translates to: RGQEWSGCPGVNVTLMRPLDFCK*NRLLVL
Trigger: CAGTACCAGCAGTCTGTTCAACTTGCAAAAATCCAG...GGGCCTCATCAGGGTGACATTCACCCCAGGGCAGCCTGACCACTCTTGGCCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CAA 90 bp ACTGAGGGAAAAAGGTTCCCAGGTGGGGTCCTCTGCCCACTTTGCCACCACATTACAGGCAGCAGCTGGTaGCCTGGCTGGACATGGATT +
Preference number: 5 (lower is better)
Translates to: TEGKRFPGGVLCPLCHHITGSSW*PGWTWI
Trigger: AATCCATGTCCAGCCAGGCAACCAGCTGCTGCCTGT...AATGTGGTGGCAAAGTGGGCAGAGGACCCCACCTGGGAACCTTTTTCCCTCAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS CCA 90 bp GGCCAGGCCGGGGGCTCCTTCAGCTCAATCCTCACATGGGCCTTTTaGTTCTTGTACACAAACTCCATCAGCTTCTCAGCGTCATTACCC +
Preference number: 5 (lower is better)
Translates to: GQAGGSFSSILTWAF*FLYTNSISFSASLP
Trigger: GGGTAATGACGCTGAGAAGCTGATGGAGTTTGTGTACAAGAACCAAAAGGCCCATGTGAGGATTGAGCTGAAGGAGCCCCCGGCCTGGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000407977.7
ENST00000577625.5
ENST00000577716.5
ENST00000581868.1
ENST00000583753.5
ENST00000584437.5
CDS CCA 90 bp GAGGGTTTCCAGGATCTCTCGCAGCTCCAGGAGTCTAAGGGCTTTTaGTGGGAGTTGCCACAGGACAAAGTAGGGCTAAGTGCAGGGCAA +
Preference number: 5 (lower is better)
Translates to: EGFQDLSQLQESKGF*WELPQDKVGLSAGQ
Trigger: TTGCCCTGCACTTAGCCCTACTTTGTCCTGTGGCAACTCCCACCAAAAGCCCTTAGACTCCTGGAGCTGCGAGAGATCCTGGAAACCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582293.1
CDS-3UTR CAA 90 bp AAAAGGTTCCCAGGTGGGGTCCTCTGCCCACTTTGCCACCACATTCACATTCCATCGTCATCACTGGCATaGCACAGGTACAGCGGGTGG +
Preference number: 5 (lower is better)
Translates to: KRFPGGVLCPLCHHIHIPSSSLA*HRYSGW
Trigger: CCACCCGCTGTACCTGTGCAATGCCAGTGATGACGA...TGGAATGTGAATGTGGTGGCAAAGTGGGCAGAGGACCCCACCTGGGAACCTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000584437.5
CDS-3UTR CAA 90 bp AGGCAGCAGCTGGTTGCCTGGCTGGACATGGATTTGCTGCACTGCAGATGTTTTTCGTCATCACTGGCATaGCACAGGTACAGCGGGTGG +
Preference number: 5 (lower is better)
Translates to: RQQLVAWLDMDLLHCRCFSSSLA*HRYSGW
Trigger: CCACCCGCTGTACCTGTGCAATGCCAGTGATGACGA...AAAACATCTGCAGTGCAGCAAATCCATGTCCAGCCAGGCAACCAGCTGCTGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000584437.5
CDS-3UTR CAA 90 bp TGGCTGGACATGGATTTGCTGCACTGCAGATGTTTTCTGCAGACAAGGTCTGGAAAGCTGGGTGCACAGTaGCATCCTGGGGCCGAGAGC +
Preference number: 5 (lower is better)
Translates to: WLDMDLLHCRCFLQTRSGKLGAQ*HPGAES
Trigger: GCTCTCGGCCCCAGGATGCAACTGTGCACCCAGCTT...TCCAGACCTTGTCTGCAGAAAACATCTGCAGTGCAGCAAATCCATGTCCAGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CAA 90 bp CTTGTCCACTCAGTGAGGCCAGACTTGTGCTCTAATCCACTCTCCTGTGGGTCCGGTCCTCTGCCCACTTaGCCACCACATTCACATTCC +
Preference number: 5 (lower is better)
Translates to: LVHSVRPDLCSNPLSCGSGPLPT*PPHSHS
Trigger: GGAATGTGAATGTGGTGGCAAAGTGGGCAGAGGACC...GGACCCACAGGAGAGTGGATTAGAGCACAAGTCTGGCCTCACTGAGTGGACAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS CCA 90 bp ACCCAGGCCGGGGGCTCCTTCAGCTCAATCCTCACATGGGCCTTTTaGTTCTTGTACACAAACTCCATCAGCTTCTCAGCGTCATTACCC +
Preference number: 5 (lower is better)
Translates to: TQAGGSFSSILTWAF*FLYTNSISFSASLP
Trigger: GGGTAATGACGCTGAGAAGCTGATGGAGTTTGTGTACAAGAACCAAAAGGCCCATGTGAGGATTGAGCTGAAGGAGCCCCCGGCCTGGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000582293.1
CDS CCA 90 bp AGTGTGCTTACCCAGGCCGGGGGCTCCTTCAGCTCAATCCTCACATaGGCCTTTTGGTTCTTGTACACAAACTCCATCAGCTTCTCAGCG +
Preference number: 5 (lower is better)
Translates to: SVLTQAGGSFSSILT*AFWFLYTNSISFSA
Trigger: CGCTGAGAAGCTGATGGAGTTTGTGTACAAGAACCAAAAGGCCCATGTGAGGATTGAGCTGAAGGAGCCCCCGGCCTGGGTAAGCACACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000582293.1
CDS-3UTR CAA 90 bp CACTGCAGATGTTTTCTGCAGACAAGGTCTGGAGCTGGAGCAGGAAACGGCACCCGAGGACTCTCCAGCTaGACGATGCTGATGAATCCA +
Preference number: 5 (lower is better)
Translates to: HCRCFLQTRSGAGAGNGTRGLSS*TMLMNP
Trigger: TGGATTCATCAGCATCGTCAAGCTGGAGAGTCCTCG...GGTGCCGTTTCCTGCTCCAGCTCCAGACCTTGTCTGCAGAAAACATCTGCAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000584437.5
CDS-3UTR CAA 90 bp CTTGTCCACTCAGTGAGGCCAGACTTGTGCTCTAATCCACTCTCCTGTGGGTCCTCTTCGACCTGGTTCTaGGTAAGATCGAGAGGGTCC +
Preference number: 5 (lower is better)
Translates to: LVHSVRPDLCSNPLSCGSSSTWF*VRSRGS
Trigger: GGACCCTCTCGATCTTACCAAGAACCAGGTCGAAGA...GGACCCACAGGAGAGTGGATTAGAGCACAAGTCTGGCCTCACTGAGTGGACAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CAA 90 bp TCCTTCCTCTGCCCAGATAAAGTCCAGCAGAAATTCCTCCTTTCTACCTCTCTGAAGCTGGGTGCACAGTaGCATCCTGGGGCCGAGAGC +
Preference number: 5 (lower is better)
Translates to: SFLCPDKVQQKFLLSTSLKLGAQ*HPGAES
Trigger: GCTCTCGGCCCCAGGATGCAACTGTGCACCCAGCTT...CAGAGAGGTAGAAAGGAGGAATTTCTGCTGGACTTTATCTGGGCAGAGGAAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CAA 90 bp ACTGAGGGAAAAAGGTTCCCAGGTGGGGTCCTCTGCCCACTTTGCCACCACATTATCTGGAGCACACTCTaGGTTGGAGCTAGGCCTGAA +
Preference number: 5 (lower is better)
Translates to: TEGKRFPGGVLCPLCHHIIWSTL*VGARPE
Trigger: TTCAGGCCTAGCTCCAACCAAGAGTGTGCTCCAGAT...AATGTGGTGGCAAAGTGGGCAGAGGACCCCACCTGGGAACCTTTTTCCCTCAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CAA 90 bp GGAGCTGGGCCTCTGGGCTGTCCAAACCCAAGGGTCACACTTTGCTTTTCCTTTCCAGAGAAGAACTCTTaGTTGTCCCCGCTCAGCTGT +
Preference number: 5 (lower is better)
Translates to: GAGPLGCPNPRVTLCFSFPEKNS*LSPLSC
Trigger: ACAGCTGAGCGGGGACAACAAAGAGTTCTTCTCTGG...AAAGGAAAAGCAAAGTGTGACCCTTGGGTTTGGACAGCCCAGAGGCCCAGCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CAA 90 bp AAAAGGTTCCCAGGTGGGGTCCTCTGCCCACTTTGCCACCACATTCACATTCCAGGTCCTCTGCCCACTTaGCCACCACATTCACATTCC +
Preference number: 5 (lower is better)
Translates to: KRFPGGVLCPLCHHIHIPGPLPT*PPHSHS
Trigger: GGAATGTGAATGTGGTGGCAAAGTGGGCAGAGGACC...TGGAATGTGAATGTGGTGGCAAAGTGGGCAGAGGACCCCACCTGGGAACCTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CAA 90 bp ACTGAGGGAAAAAGGTTCCCAGGTGGGGTCCTCTGCCCACTTTGCCACCACATTAATCCAGGCTCCAGATaGTCGTCATCACTGGCATTG +
Preference number: 5 (lower is better)
Translates to: TEGKRFPGGVLCPLCHHINPGSR*SSSLAL
Trigger: CAATGCCAGTGATGACGACAATCTGGAGCCTGGATT...AATGTGGTGGCAAAGTGGGCAGAGGACCCCACCTGGGAACCTTTTTCCCTCAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000584437.5
CDS-3UTR CAA 90 bp GAGGGAGGTGATAAGGTGTCATGCGTTCTGCTGAACCCACTGGCTGGTATGAACCGAGGACTCTCCAGCTaGACGATGCTGATGAATCCA +
Preference number: 5 (lower is better)
Translates to: EGGDKVSCVLLNPLAGMNRGLSS*TMLMNP
Trigger: TGGATTCATCAGCATCGTCAAGCTGGAGAGTCCTCG...GTTCATACCAGCCAGTGGGTTCAGCAGAACGCATGACACCTTATCACCTCCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000584437.5
CDS-3UTR CAA 90 bp AAAAGGTTCCCAGGTGGGGTCCTCTGCCCACTTTGCCACCACATTCACATTCCATCTCCCTCTGTGATGTaGAACATGCAGAGGGGGCAA +
Preference number: 5 (lower is better)
Translates to: KRFPGGVLCPLCHHIHIPSPSVM*NMQRGQ
Trigger: TTGCCCCCTCTGCATGTTCAACATCACAGAGGGAGA...TGGAATGTGAATGTGGTGGCAAAGTGGGCAGAGGACCCCACCTGGGAACCTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CAA 90 bp AGGCAGCAGCTGGTTGCCTGGCTGGACATGGATTTGCTGCACTGCAGATGTTTTTCTCCCTCTGTGATGTaGAACATGCAGAGGGGGCAA +
Preference number: 5 (lower is better)
Translates to: RQQLVAWLDMDLLHCRCFSPSVM*NMQRGQ
Trigger: TTGCCCCCTCTGCATGTTCAACATCACAGAGGGAGA...AAAACATCTGCAGTGCAGCAAATCCATGTCCAGCCAGGCAACCAGCTGCTGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CAA 90 bp GAGGGAGGTGATAAGGTGTCATGCGTTCTGCTGAACCCACTGGCTGGTATGAACTCTTCGACCTGGTTCTaGGTAAGATCGAGAGGGTCC +
Preference number: 5 (lower is better)
Translates to: EGGDKVSCVLLNPLAGMNSSTWF*VRSRGS
Trigger: GGACCCTCTCGATCTTACCAAGAACCAGGTCGAAGA...GTTCATACCAGCCAGTGGGTTCAGCAGAACGCATGACACCTTATCACCTCCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CAA 90 bp AGTCCTCTTCCAGTGCTTCTAGGAAGTACGGCAAAAAGAATGGTGTTTGCTGTGAAGCTGGGTGCACAGTaGCATCCTGGGGCCGAGAGC +
Preference number: 5 (lower is better)
Translates to: SPLPVLLGSTAKRMVFAVKLGAQ*HPGAES
Trigger: GCTCTCGGCCCCAGGATGCAACTGTGCACCCAGCTT...CACAGCAAACACCATTCTTTTTGCCGTACTTCCTAGAAGCACTGGAAGAGGACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CAA 90 bp CTTTGTTGTCCCCGCTCAGCTGTAATTCTGCCTTTTCTACCTTCATTCCATCCTAAGCTGGGTGCACAGTaGCATCCTGGGGCCGAGAGC +
Preference number: 5 (lower is better)
Translates to: LCCPRSAVILPFLPSFHPKLGAQ*HPGAES
Trigger: GCTCTCGGCCCCAGGATGCAACTGTGCACCCAGCTT...AGGATGGAATGAAGGTAGAAAAGGCAGAATTACAGCTGAGCGGGGACAACAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CAA 90 bp GGTGATAAGGTGTCATGCGTTCTGCTGAACCCACTGGCTGGTATGAACATGAGGACACTGGCTGTGAATTaGAGTAACAGGGGCCTGGGG +
Preference number: 5 (lower is better)
Translates to: GDKVSCVLLNPLAGMNMRTLAVN*SNRGLG
Trigger: CCCCAGGCCCCTGTTACTCAAATTCACAGCCAGTGT...CCTCATGTTCATACCAGCCAGTGGGTTCAGCAGAACGCATGACACCTTATCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CAA 90 bp AAAGCTGGTGTTCAGAGCTCACCCAAGGAGGGAGGTGATAAGGTGTCATGCGTTGGAGCACACTCTTGGTaGGAGCTAGGCCTGAACATC +
Preference number: 5 (lower is better)
Translates to: KAGVQSSPKEGGDKVSCVGAHSW*ELGLNI
Trigger: GATGTTCAGGCCTAGCTCCAACCAAGAGTGTGCTCC...AACGCATGACACCTTATCACCTCCCTCCTTGGGTGAGCTCTGAACACCAGCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CAA 90 bp ACCAAGGCTGCTGTACCCACCTCAGGGACAGAACTCCACACTATAGTGGGAAAGCCAGAGAAGAACTCTTaGTTGTCCCCGCTCAGCTGT +
Preference number: 5 (lower is better)
Translates to: TKAAVPTSGTELHTIVGKPEKNS*LSPLSC
Trigger: ACAGCTGAGCGGGGACAACAAAGAGTTCTTCTCTGG...CTTTCCCACTATAGTGTGGAGTTCTGTCCCTGAGGTGGGTACAGCAGCCTTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CAA 90 bp AGGCAGCAGCTGGTTGCCTGGCTGGACATGGATTTGCTGCACTGCAGATGTTTTCCAGAGAAGAACTCTTaGTTGTCCCCGCTCAGCTGT +
Preference number: 5 (lower is better)
Translates to: RQQLVAWLDMDLLHCRCFPEKNS*LSPLSC
Trigger: ACAGCTGAGCGGGGACAACAAAGAGTTCTTCTCTGG...AAAACATCTGCAGTGCAGCAAATCCATGTCCAGCCAGGCAACCAGCTGCTGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CAA 90 bp AAGGTGTCATGCGTTCTGCTGAACCCACTGGCTGGTATGAACATGAGGCTTGGGTCAGTGAGGCCAGACTaGTGCTCTAATCCACTCTCC +
Preference number: 5 (lower is better)
Translates to: KVSCVLLNPLAGMNMRLGSVRPD*CSNPLS
Trigger: GGAGAGTGGATTAGAGCACAAGTCTGGCCTCACTGA...CCCAAGCCTCATGTTCATACCAGCCAGTGGGTTCAGCAGAACGCATGACACCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CAA 90 bp ACCAAGGCTGCTGTACCCACCTCAGGGACAGAACTCCACACTATAGTGGGAAAGAATCCAGGCTCCAGATaGTCGTCATCACTGGCATTG +
Preference number: 5 (lower is better)
Translates to: TKAAVPTSGTELHTIVGKNPGSR*SSSLAL
Trigger: CAATGCCAGTGATGACGACAATCTGGAGCCTGGATT...CTTTCCCACTATAGTGTGGAGTTCTGTCCCTGAGGTGGGTACAGCAGCCTTGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000584437.5
CDS-3UTR CAA 90 bp AAAGCTGGTGTTCAGAGCTCACCCAAGGAGGGAGGTGATAAGGTGTCATGCGTTTCTCCCTCTGTGATGTaGAACATGCAGAGGGGGCAA +
Preference number: 5 (lower is better)
Translates to: KAGVQSSPKEGGDKVSCVSPSVM*NMQRGQ
Trigger: TTGCCCCCTCTGCATGTTCAACATCACAGAGGGAGA...AACGCATGACACCTTATCACCTCCCTCCTTGGGTGAGCTCTGAACACCAGCTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CAA 90 bp GGTGATAAGGTGTCATGCGTTCTGCTGAACCCACTGGCTGGTATGAACATGAGGTCTTCGACCTGGTTCTaGGTAAGATCGAGAGGGTCC +
Preference number: 5 (lower is better)
Translates to: GDKVSCVLLNPLAGMNMRSSTWF*VRSRGS
Trigger: GGACCCTCTCGATCTTACCAAGAACCAGGTCGAAGA...CCTCATGTTCATACCAGCCAGTGGGTTCAGCAGAACGCATGACACCTTATCACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CAA 90 bp GAGCAGCACCTTTGTAACACCTGGCTACCCATAGCTAGCTTTCTGCCCTCAAAAACACTGGCTGTGAATTaGAGTAACAGGGGCCTGGGG +
Preference number: 5 (lower is better)
Translates to: EQHLCNTWLPIASFLPSKTLAVN*SNRGLG
Trigger: CCCCAGGCCCCTGTTACTCAAATTCACAGCCAGTGT...TTTTGAGGGCAGAAAGCTAGCTATGGGTAGCCAGGTGTTACAAAGGTGCTGCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CAA 90 bp CCTGGCTGGACATGGATTTGCTGCACTGCAGATGTTTTCTGCAGACAAGGTCTGATCTGGAGCACACTCTaGGTTGGAGCTAGGCCTGAA +
Preference number: 5 (lower is better)
Translates to: PGWTWICCTADVFCRQGLIWSTL*VGARPE
Trigger: TTCAGGCCTAGCTCCAACCAAGAGTGTGCTCCAGAT...CAGACCTTGTCTGCAGAAAACATCTGCAGTGCAGCAAATCCATGTCCAGCCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CAA 90 bp GGAGCTGGGCCTCTGGGCTGTCCAAACCCAAGGGTCACACTTTGCTTTTCCTTTGAGAAGAACTCTTTGTaGTCCCCGCTCAGCTGTAAT +
Preference number: 5 (lower is better)
Translates to: GAGPLGCPNPRVTLCFSFEKNSL*SPLSCN
Trigger: ATTACAGCTGAGCGGGGACAACAAAGAGTTCTTCTC...AAAGGAAAAGCAAAGTGTGACCCTTGGGTTTGGACAGCCCAGAGGCCCAGCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CAA 90 bp CCTGGCTGGACATGGATTTGCTGCACTGCAGATGTTTTCTGCAGACAAGGTCTGCCAGAGAAGAACTCTTaGTTGTCCCCGCTCAGCTGT +
Preference number: 5 (lower is better)
Translates to: PGWTWICCTADVFCRQGLPEKNS*LSPLSC
Trigger: ACAGCTGAGCGGGGACAACAAAGAGTTCTTCTCTGG...CAGACCTTGTCTGCAGAAAACATCTGCAGTGCAGCAAATCCATGTCCAGCCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CAA 90 bp TCCTTCCTCTGCCCAGATAAAGTCCAGCAGAAATTCCTCCTTTCTACCTCTCTGAAATCTGCAAACCTGTaGCGCTGTCGGGCCCACTGG +
Preference number: 5 (lower is better)
Translates to: SFLCPDKVQQKFLLSTSLKSANL*RCRAHW
Trigger: CCAGTGGGCCCGACAGCGCAACAGGTTTGCAGATTT...CAGAGAGGTAGAAAGGAGGAATTTCTGCTGGACTTTATCTGGGCAGAGGAAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584437.5
CDS-3UTR CAA 90 bp ACTCAGCCTTCAAGGGATCCAGCCCACACACGCCACAGGCAGCAGCTGGTTGCCAGGCACTATGAAAATTaGCGTCTTTGTACAAACACA +
Preference number: 5 (lower is better)
Translates to: TQPSRDPAHTRHRQQLVARHYEN*RLCTNT
Trigger: TGTGTTTGTACAAAGACGCAAATTTTCATAGTGCCT...GGCAACCAGCTGCTGCCTGTGGCGTGTGTGGGCTGGATCCCTTGAAGGCTGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584437.5
CDS-3UTR CAA 90 bp ACTGAGGGAAAAAGGTTCCCAGGTGGGGTCCTCTGCCCACTTTGCCACCACATTAGCCAAGTCGTAGTTTaGGCCCTTCCTTTCTCTAAA +
Preference number: 5 (lower is better)
Translates to: TEGKRFPGGVLCPLCHHISQVVV*ALPFSK
Trigger: TTTAGAGAAAGGAAGGGCCAAAACTACGACTTGGCT...AATGTGGTGGCAAAGTGGGCAGAGGACCCCACCTGGGAACCTTTTTCCCTCAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000584437.5
CDS-3UTR CAA 90 bp CCTGGCTGGACATGGATTTGCTGCACTGCAGATGTTTTCTGCAGACAAGGTCTGAATCCAGGCTCCAGATaGTCGTCATCACTGGCATTG +
Preference number: 5 (lower is better)
Translates to: PGWTWICCTADVFCRQGLNPGSR*SSSLAL
Trigger: CAATGCCAGTGATGACGACAATCTGGAGCCTGGATT...CAGACCTTGTCTGCAGAAAACATCTGCAGTGCAGCAAATCCATGTCCAGCCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000584437.5
CDS-3UTR CAA 90 bp GAGCAGCACCTTTGTAACACCTGGCTACCCATAGCTAGCTTTCTGCCCTCAAAACGAGGACTCTCCAGCTaGACGATGCTGATGAATCCA +
Preference number: 5 (lower is better)
Translates to: EQHLCNTWLPIASFLPSKRGLSS*TMLMNP
Trigger: TGGATTCATCAGCATCGTCAAGCTGGAGAGTCCTCG...TTTTGAGGGCAGAAAGCTAGCTATGGGTAGCCAGGTGTTACAAAGGTGCTGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000584437.5
CDS-3UTR CAA 90 bp AAAAGGTTCCCAGGTGGGGTCCTCTGCCCACTTTGCCACCACATTCACATTCCATGGGCCTTTTGGTTCTaGTACACAAACTCCATCAGC +
Preference number: 5 (lower is better)
Translates to: KRFPGGVLCPLCHHIHIPWAFWF*YTNSIS
Trigger: GCTGATGGAGTTTGTGTACAAGAACCAAAAGGCCCA...TGGAATGTGAATGTGGTGGCAAAGTGGGCAGAGGACCCCACCTGGGAACCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CAA 90 bp ACTGAGGGAAAAAGGTTCCCAGGTGGGGTCCTCTGCCCACTTTGCCACCACATTCTGGATTTTTGCAAGTaGAACAGACTGCTGGTACTG +
Preference number: 5 (lower is better)
Translates to: TEGKRFPGGVLCPLCHHILDFCK*NRLLVL
Trigger: CAGTACCAGCAGTCTGTTCAACTTGCAAAAATCCAG...AATGTGGTGGCAAAGTGGGCAGAGGACCCCACCTGGGAACCTTTTTCCCTCAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CAA 90 bp CAGATGTTTTCTGCAGACAAGGTCTGGAGCTGGAGCAGGAAACGGCACCCTCTCAGAGAGGCTGGATTTTaGCAAGTTGAACAGACTGCT +
Preference number: 5 (lower is better)
Translates to: QMFSADKVWSWSRKRHPLREAGF*QVEQTA
Trigger: AGCAGTCTGTTCAACTTGCAAAAATCCAGCCTCTCT...GAGAGGGTGCCGTTTCCTGCTCCAGCTCCAGACCTTGTCTGCAGAAAACATCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CAA 90 bp AAAAGGTTCCCAGGTGGGGTCCTCTGCCCACTTTGCCACCACATTCACATTCCATGGCTGGACATGGATTaGCTGCACTGCAGATGTTTT +
Preference number: 5 (lower is better)
Translates to: KRFPGGVLCPLCHHIHIPWLDMD*LHCRCF
Trigger: AAAACATCTGCAGTGCAGCAAATCCATGTCCAGCCA...TGGAATGTGAATGTGGTGGCAAAGTGGGCAGAGGACCCCACCTGGGAACCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CAA 90 bp AGTCCTCTTCCAGTGCTTCTAGGAAGTACGGCAAAAAGAATGGTGTTTGCTGTGACAGGCAGCAGCTGGTaGCCTGGCTGGACATGGATT +
Preference number: 5 (lower is better)
Translates to: SPLPVLLGSTAKRMVFAVTGSSW*PGWTWI
Trigger: AATCCATGTCCAGCCAGGCAACCAGCTGCTGCCTGT...CACAGCAAACACCATTCTTTTTGCCGTACTTCCTAGAAGCACTGGAAGAGGACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CAA 90 bp AGCAGCTGGTTGCCTGGCTGGACATGGATTTGCTGCACTGCAGATGTTTTCTGCGAGAAGAACTCTTTGTaGTCCCCGCTCAGCTGTAAT +
Preference number: 5 (lower is better)
Translates to: SSWLPGWTWICCTADVFCEKNSL*SPLSCN
Trigger: ATTACAGCTGAGCGGGGACAACAAAGAGTTCTTCTC...GCAGAAAACATCTGCAGTGCAGCAAATCCATGTCCAGCCAGGCAACCAGCTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CAA 90 bp GGTGATAAGGTGTCATGCGTTCTGCTGAACCCACTGGCTGGTATGAACATGAGGCCCAAGGGTCACACTTaGCTTTTCCTTTGTTGTCCC +
Preference number: 5 (lower is better)
Translates to: GDKVSCVLLNPLAGMNMRPKGHT*LFLCCP
Trigger: GGGACAACAAAGGAAAAGCAAAGTGTGACCCTTGGG...CCTCATGTTCATACCAGCCAGTGGGTTCAGCAGAACGCATGACACCTTATCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CAA 90 bp TCCTTCCTCTGCCCAGATAAAGTCCAGCAGAAATTCCTCCTTTCTACCTCTCTGGGTCCTCTGCCCACTTaGCCACCACATTCACATTCC +
Preference number: 5 (lower is better)
Translates to: SFLCPDKVQQKFLLSTSLGPLPT*PPHSHS
Trigger: GGAATGTGAATGTGGTGGCAAAGTGGGCAGAGGACC...CAGAGAGGTAGAAAGGAGGAATTTCTGCTGGACTTTATCTGGGCAGAGGAAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS CCA 90 bp GGTGGGGTGTTCCTGCACTCTAGCCAGCATGATACGCTGTCCCGATaGTTAAGTATTTTGGTTGTCATCTCTGCTGTATCCTTCTCAGCT +
Preference number: 5 (lower is better)
Translates to: GGVFLHSSQHDTLSR*LSILVVISAVSFSA
Trigger: AGCTGAGAAGGATACAGCAGAGATGACAACCAAAATACTTAACCATCGGGACAGCGTATCATGCTGGCTAGAGTGCAGGAACACCCCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581868.1
CDS-3UTR CAA 90 bp AGCAGCTGGTTGCCTGGCTGGACATGGATTTGCTGCACTGCAGATGTTTTCTGCAGCCAAGTCGTAGTTTaGGCCCTTCCTTTCTCTAAA +
Preference number: 5 (lower is better)
Translates to: SSWLPGWTWICCTADVFCSQVVV*ALPFSK
Trigger: TTTAGAGAAAGGAAGGGCCAAAACTACGACTTGGCT...GCAGAAAACATCTGCAGTGCAGCAAATCCATGTCCAGCCAGGCAACCAGCTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000584437.5
CDS-3UTR CAA 90 bp TCCTTCCTCTGCCCAGATAAAGTCCAGCAGAAATTCCTCCTTTCTACCTCTCTGTCTTCGACCTGGTTCTaGGTAAGATCGAGAGGGTCC +
Preference number: 5 (lower is better)
Translates to: SFLCPDKVQQKFLLSTSLSSTWF*VRSRGS
Trigger: GGACCCTCTCGATCTTACCAAGAACCAGGTCGAAGA...CAGAGAGGTAGAAAGGAGGAATTTCTGCTGGACTTTATCTGGGCAGAGGAAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CAA 90 bp AAAAGGTTCCCAGGTGGGGTCCTCTGCCCACTTTGCCACCACATTCACATTCCACTGGATTTTTGCAAGTaGAACAGACTGCTGGTACTG +
Preference number: 5 (lower is better)
Translates to: KRFPGGVLCPLCHHIHIPLDFCK*NRLLVL
Trigger: CAGTACCAGCAGTCTGTTCAACTTGCAAAAATCCAG...TGGAATGTGAATGTGGTGGCAAAGTGGGCAGAGGACCCCACCTGGGAACCTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CAA 90 bp ACTGAGGGAAAAAGGTTCCCAGGTGGGGTCCTCTGCCCACTTTGCCACCACATTCAAAAAGAATGGTGTTaGCTGTGGTCCTTTCCTTTC +
Preference number: 5 (lower is better)
Translates to: TEGKRFPGGVLCPLCHHIQKEWC*LWSFPF
Trigger: GAAAGGAAAGGACCACAGCAAACACCATTCTTTTTG...AATGTGGTGGCAAAGTGGGCAGAGGACCCCACCTGGGAACCTTTTTCCCTCAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CAA 90 bp AGAACTCTTTGTTGTCCCCGCTCAGCTGTAATTCTGCCTTTTCTACCTTCATTCACAGGCAGCAGCTGGTaGCCTGGCTGGACATGGATT +
Preference number: 5 (lower is better)
Translates to: RTLCCPRSAVILPFLPSFTGSSW*PGWTWI
Trigger: AATCCATGTCCAGCCAGGCAACCAGCTGCTGCCTGT...GAATGAAGGTAGAAAAGGCAGAATTACAGCTGAGCGGGGACAACAAAGAGTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CAA 90 bp AAAGCTGGTGTTCAGAGCTCACCCAAGGAGGGAGGTGATAAGGTGTCATGCGTTGAGAAGAACTCTTTGTaGTCCCCGCTCAGCTGTAAT +
Preference number: 5 (lower is better)
Translates to: KAGVQSSPKEGGDKVSCVEKNSL*SPLSCN
Trigger: ATTACAGCTGAGCGGGGACAACAAAGAGTTCTTCTC...AACGCATGACACCTTATCACCTCCCTCCTTGGGTGAGCTCTGAACACCAGCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CAA 90 bp AAGGTGTCATGCGTTCTGCTGAACCCACTGGCTGGTATGAACATGAGGCTTGGGATTTCAGGCCACACGTaGATGTCCAAAGATGCTACA +
Preference number: 5 (lower is better)
Translates to: KVSCVLLNPLAGMNMRLGISGHT*MSKDAT
Trigger: TGTAGCATCTTTGGACATCAACGTGTGGCCTGAAAT...CCCAAGCCTCATGTTCATACCAGCCAGTGGGTTCAGCAGAACGCATGACACCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584437.5
CDS GCA 90 bp AGTACAGCTCATTCTTCCACCTTCTTACTCTGCAACCAAACCAAGTaGCCCATACTACAGGTAGGTGCCGAGAAATTCCGCAGCCTGAAA +
Preference number: 5 (lower is better)
Translates to: STAHSSTFLLCNQTK*PILQVGAEKFRSLK
Trigger: TTTCAGGCTGCGGAATTTCTCGGCACCTACCTGTAGTATGGGGCACTTGGTTTGGTTGCAGAGTAAGAAGGTGGAAGAATGAGCTGTACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000584437.5
CDS CCA 90 bp TTCAGAAAGACAATTCTGGATCAACTCCCTAGAGCAGGAAGCCTGTaGTTTGTAATTGGTGTTCTAGCTCTGACTCCCTCCCCTGGGACT +
Preference number: 5 (lower is better)
Translates to: FRKTILDQLPRAGSL*FVIGVLALTPSPGT
Trigger: AGTCCCAGGGGAGGGAGTCAGAGCTAGAACACCAATTACAAACCACAGGCTTCCTGCTCTAGGGAGTTGATCCAGAATTGTCTTTCTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580014.1
CDS-3UTR CAA 90 bp CCTGGCTGGACATGGATTTGCTGCACTGCAGATGTTTTCTGCAGACAAGGTCTGGAATCATGGATGGACTaGGAAAGTTCGGAAGGATTC +
Preference number: 5 (lower is better)
Translates to: PGWTWICCTADVFCRQGLESWMD*ESSEGF
Trigger: GAATCCTTCCGAACTTTCCAAGTCCATCCATGATTC...CAGACCTTGTCTGCAGAAAACATCTGCAGTGCAGCAAATCCATGTCCAGCCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000584437.5
CDS-3UTR CAA 90 bp AGTCCTCTTCCAGTGCTTCTAGGAAGTACGGCAAAAAGAATGGTGTTTGCTGTGTCCATATGCATCAAGTaGCCAGGCACTGTTGCGCTG +
Preference number: 5 (lower is better)
Translates to: SPLPVLLGSTAKRMVFAVSICIK*PGTVAL
Trigger: CAGCGCAACAGTGCCTGGCAACTTGATGCATATGGA...CACAGCAAACACCATTCTTTTTGCCGTACTTCCTAGAAGCACTGGAAGAGGACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000407977.7
CDS-3UTR CAA 90 bp AGAACTCTTTGTTGTCCCCGCTCAGCTGTAATTCTGCCTTTTCTACCTTCATTCACACTGGCTGTGAATTaGAGTAACAGGGGCCTGGGG +
Preference number: 5 (lower is better)
Translates to: RTLCCPRSAVILPFLPSFTLAVN*SNRGLG
Trigger: CCCCAGGCCCCTGTTACTCAAATTCACAGCCAGTGT...GAATGAAGGTAGAAAAGGCAGAATTACAGCTGAGCGGGGACAACAAAGAGTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CAA 90 bp AAACTTTTCCCAGAGAAGAACTCTTTGTTGTCCCCGCTCAGCTGTAATTCTGCCTCAGTGAGGCCAGACTaGTGCTCTAATCCACTCTCC +
Preference number: 5 (lower is better)
Translates to: KLFPEKNSLLSPLSCNSASVRPD*CSNPLS
Trigger: GGAGAGTGGATTAGAGCACAAGTCTGGCCTCACTGA...GGCAGAATTACAGCTGAGCGGGGACAACAAAGAGTTCTTCTCTGGGAAAAGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS GCA 90 bp AGTACAGCTCATTCTTCCACCTTCTTACTCTGCAACCAAACCAAGTaGCCCATACTACAGGTAGGTGCCGAGAAATTCCGCAGCAGAAAA +
Preference number: 5 (lower is better)
Translates to: STAHSSTFLLCNQTK*PILQVGAEKFRSRK
Trigger: TTTTCTGCTGCGGAATTTCTCGGCACCTACCTGTAGTATGGGGCACTTGGTTTGGTTGCAGAGTAAGAAGGTGGAAGAATGAGCTGTACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580014.1
CDS-3UTR CAA 90 bp TGGCTGGACATGGATTTGCTGCACTGCAGATGTTTTCTGCAGACAAGGTCTGGAGAATCATGGATGGACTaGGAAAGTTCGGAAGGATTC +
Preference number: 5 (lower is better)
Translates to: WLDMDLLHCRCFLQTRSGESWMD*ESSEGF
Trigger: GAATCCTTCCGAACTTTCCAAGTCCATCCATGATTC...TCCAGACCTTGTCTGCAGAAAACATCTGCAGTGCAGCAAATCCATGTCCAGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000584437.5
CDS-3UTR CAA 90 bp AAAGCTGGTGTTCAGAGCTCACCCAAGGAGGGAGGTGATAAGGTGTCATGCGTTTCAGATCACTTGGCATaGCTCTTCCATATGCATCAA +
Preference number: 5 (lower is better)
Translates to: KAGVQSSPKEGGDKVSCVSDHLA*LFHMHQ
Trigger: TTGATGCATATGGAAGAGCAATGCCAAGTGATCTGA...AACGCATGACACCTTATCACCTCCCTCCTTGGGTGAGCTCTGAACACCAGCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000407977.7
ENST00000584437.5
CDS-3UTR CAA 90 bp GGAGCTGGGCCTCTGGGCTGTCCAAACCCAAGGGTCACACTTTGCTTTTCCTTTTTGGAATTTCCAACTTaGCTTGTGATTGAATGTCAC +
Preference number: 5 (lower is better)
Translates to: GAGPLGCPNPRVTLCFSFLEFPT*LVIECH
Trigger: GTGACATTCAATCACAAGCAAAGTTGGAAATTCCAA...AAAGGAAAAGCAAAGTGTGACCCTTGGGTTTGGACAGCCCAGAGGCCCAGCTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000407977.7
ENST00000584437.5
CDS-3UTR CAA 90 bp CTTGTCCACTCAGTGAGGCCAGACTTGTGCTCTAATCCACTCTCCTGTGGGTCCTTGGAATTTCCAACTTaGCTTGTGATTGAATGTCAC +
Preference number: 5 (lower is better)
Translates to: LVHSVRPDLCSNPLSCGSLEFPT*LVIECH
Trigger: GTGACATTCAATCACAAGCAAAGTTGGAAATTCCAA...GGACCCACAGGAGAGTGGATTAGAGCACAAGTCTGGCCTCACTGAGTGGACAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000407977.7
ENST00000584437.5
CDS-3UTR CAA 90 bp AGAACTCTTTGTTGTCCCCGCTCAGCTGTAATTCTGCCTTTTCTACCTTCATTCATCTGGAGCACACTCTaGGTTGGAGCTAGGCCTGAA +
Preference number: 5 (lower is better)
Translates to: RTLCCPRSAVILPFLPSFIWSTL*VGARPE
Trigger: TTCAGGCCTAGCTCCAACCAAGAGTGTGCTCCAGAT...GAATGAAGGTAGAAAAGGCAGAATTACAGCTGAGCGGGGACAACAAAGAGTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CAA 90 bp GGTGATAAGGTGTCATGCGTTCTGCTGAACCCACTGGCTGGTATGAACATGAGGCAAAAAGAATGGTGTTaGCTGTGGTCCTTTCCTTTC +
Preference number: 5 (lower is better)
Translates to: GDKVSCVLLNPLAGMNMRQKEWC*LWSFPF
Trigger: GAAAGGAAAGGACCACAGCAAACACCATTCTTTTTG...CCTCATGTTCATACCAGCCAGTGGGTTCAGCAGAACGCATGACACCTTATCACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CAA 90 bp AGTCCTCTTCCAGTGCTTCTAGGAAGTACGGCAAAAAGAATGGTGTTTGCTGTGCCCAAGGGTCACACTTaGCTTTTCCTTTGTTGTCCC +
Preference number: 5 (lower is better)
Translates to: SPLPVLLGSTAKRMVFAVPKGHT*LFLCCP
Trigger: GGGACAACAAAGGAAAAGCAAAGTGTGACCCTTGGG...CACAGCAAACACCATTCTTTTTGCCGTACTTCCTAGAAGCACTGGAAGAGGACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CAA 90 bp GAGCAGCACCTTTGTAACACCTGGCTACCCATAGCTAGCTTTCTGCCCTCAAAATCCATATGCATCAAGTaGCCAGGCACTAAACCCAAT +
Preference number: 5 (lower is better)
Translates to: EQHLCNTWLPIASFLPSKSICIK*PGTKPN
Trigger: ATTGGGTTTAGTGCCTGGCAACTTGATGCATATGGA...TTTTGAGGGCAGAAAGCTAGCTATGGGTAGCCAGGTGTTACAAAGGTGCTGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584437.5
CDS-3UTR CAA 90 bp AGTCCTCTTCCAGTGCTTCTAGGAAGTACGGCAAAAAGAATGGTGTTTGCTGTGTGGGCCTTTTGGTTCTaGTACACAAACTCCATCAGC +
Preference number: 5 (lower is better)
Translates to: SPLPVLLGSTAKRMVFAVWAFWF*YTNSIS
Trigger: GCTGATGGAGTTTGTGTACAAGAACCAAAAGGCCCA...CACAGCAAACACCATTCTTTTTGCCGTACTTCCTAGAAGCACTGGAAGAGGACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CAA 90 bp AAGAACTCTTTGTTGTCCCCGCTCAGCTGTAATTCTGCCTTTTCTACCTTCATTTCTCCCTCTGTGATGTaGAACATGCAGAGGGGGCAA +
Preference number: 5 (lower is better)
Translates to: KNSLLSPLSCNSAFSTFISPSVM*NMQRGQ
Trigger: TTGCCCCCTCTGCATGTTCAACATCACAGAGGGAGA...AATGAAGGTAGAAAAGGCAGAATTACAGCTGAGCGGGGACAACAAAGAGTTCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CAA 90 bp AAGAACTCTTTGTTGTCCCCGCTCAGCTGTAATTCTGCCTTTTCTACCTTCATTATCTGGAGCACACTCTaGGTTGGAGCTAGGCCTGAA +
Preference number: 5 (lower is better)
Translates to: KNSLLSPLSCNSAFSTFIIWSTL*VGARPE
Trigger: TTCAGGCCTAGCTCCAACCAAGAGTGTGCTCCAGAT...AATGAAGGTAGAAAAGGCAGAATTACAGCTGAGCGGGGACAACAAAGAGTTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CAA 90 bp CTTTGTTGTCCCCGCTCAGCTGTAATTCTGCCTTTTCTACCTTCATTCCATCCTTGGCTGGACATGGATTaGCTGCACTGCAGATGTTTT +
Preference number: 5 (lower is better)
Translates to: LCCPRSAVILPFLPSFHPWLDMD*LHCRCF
Trigger: AAAACATCTGCAGTGCAGCAAATCCATGTCCAGCCA...AGGATGGAATGAAGGTAGAAAAGGCAGAATTACAGCTGAGCGGGGACAACAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CAA 90 bp AAACTTTTCCCAGAGAAGAACTCTTTGTTGTCCCCGCTCAGCTGTAATTCTGCCTGGCTGGACATGGATTaGCTGCACTGCAGATGTTTT +
Preference number: 5 (lower is better)
Translates to: KLFPEKNSLLSPLSCNSAWLDMD*LHCRCF
Trigger: AAAACATCTGCAGTGCAGCAAATCCATGTCCAGCCA...GGCAGAATTACAGCTGAGCGGGGACAACAAAGAGTTCTTCTCTGGGAAAAGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CAA 90 bp AGTCCTCTTCCAGTGCTTCTAGGAAGTACGGCAAAAAGAATGGTGTTTGCTGTGGAGAAGAACTCTTTGTaGTCCCCGCTCAGCTGTAAT +
Preference number: 5 (lower is better)
Translates to: SPLPVLLGSTAKRMVFAVEKNSL*SPLSCN
Trigger: ATTACAGCTGAGCGGGGACAACAAAGAGTTCTTCTC...CACAGCAAACACCATTCTTTTTGCCGTACTTCCTAGAAGCACTGGAAGAGGACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CAA 90 bp AAGAACTCTTTGTTGTCCCCGCTCAGCTGTAATTCTGCCTTTTCTACCTTCATTTCAGTGAGGCCAGACTaGTGCTCTAATCCACTCTCC +
Preference number: 5 (lower is better)
Translates to: KNSLLSPLSCNSAFSTFISVRPD*CSNPLS
Trigger: GGAGAGTGGATTAGAGCACAAGTCTGGCCTCACTGA...AATGAAGGTAGAAAAGGCAGAATTACAGCTGAGCGGGGACAACAAAGAGTTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS GCA 90 bp TCTCTGAATCATGGATGGACTTGGAAAGTTCGGAAGGATTCCGAGTaGTTCCTTTCAGAAAGACAATTCTGGATCAACTCCCTAGAGCAG +
Preference number: 5 (lower is better)
Translates to: SLNHGWTWKVRKDSE*FLSERQFWINSLEQ
Trigger: CTGCTCTAGGGAGTTGATCCAGAATTGTCTTTCTGAAAGGAAGCACTCGGAATCCTTCCGAACTTTCCAAGTCCATCCATGATTCAGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000577716.5
ENST00000580014.1
CDS CCA 90 bp ATCCCAGAGAGAGAGAAGGCAGTATCTCTGAATCATGGATGGACTTaGAAAGTTCGGAAGGATTCCGAGTGCTTCCTTTCAGAAAGACAA +
Preference number: 5 (lower is better)
Translates to: IPEREKAVSLNHGWT*KVRKDSECFLSERQ
Trigger: TTGTCTTTCTGAAAGGAAGCACTCGGAATCCTTCCGAACTTTCCAAGTCCATCCATGATTCAGAGATACTGCCTTCTCTCTCTCTGGGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000580014.1
ENST00000584437.5
CDS CCA 90 bp TTGTCATCTCTGCTGTATCCTTCTCAGCTTCCATCAACCCTTTGTTaGCTGACTTCACCTGTCCTGAAATATTCAGCTGTAGTCTCCTCT +
Preference number: 5 (lower is better)
Translates to: LSSLLYPSQLPSTLC*LTSPVLKYSAVVSS
Trigger: AGAGGAGACTACAGCTGAATATTTCAGGACAGGTGAAGTCAGCCAACAAAGGGTTGATGGAAGCTGAGAAGGATACAGCAGAGATGACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581868.1
CDS-3UTR CAA 90 bp AGTCCTCTTCCAGTGCTTCTAGGAAGTACGGCAAAAAGAATGGTGTTTGCTGTGGAATCATGGATGGACTaGGAAAGTTCGGAAGGATTC +
Preference number: 5 (lower is better)
Translates to: SPLPVLLGSTAKRMVFAVESWMD*ESSEGF
Trigger: GAATCCTTCCGAACTTTCCAAGTCCATCCATGATTC...CACAGCAAACACCATTCTTTTTGCCGTACTTCCTAGAAGCACTGGAAGAGGACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000584437.5
CDS-3UTR CAA 90 bp AGAACTCTTTGTTGTCCCCGCTCAGCTGTAATTCTGCCTTTTCTACCTTCATTCTGGGCCTTTTGGTTCTaGTACACAAACTCCATCAGC +
Preference number: 5 (lower is better)
Translates to: RTLCCPRSAVILPFLPSFWAFWF*YTNSIS
Trigger: GCTGATGGAGTTTGTGTACAAGAACCAAAAGGCCCA...GAATGAAGGTAGAAAAGGCAGAATTACAGCTGAGCGGGGACAACAAAGAGTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CAA 90 bp CTTTGTTGTCCCCGCTCAGCTGTAATTCTGCCTTTTCTACCTTCATTCCATCCTAGAGAGGCTGGATTTTaGCAAGTTGAACAGACTGCT +
Preference number: 5 (lower is better)
Translates to: LCCPRSAVILPFLPSFHPREAGF*QVEQTA
Trigger: AGCAGTCTGTTCAACTTGCAAAAATCCAGCCTCTCT...AGGATGGAATGAAGGTAGAAAAGGCAGAATTACAGCTGAGCGGGGACAACAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CAA 90 bp AGTCCTCTTCCAGTGCTTCTAGGAAGTACGGCAAAAAGAATGGTGTTTGCTGTGAGAGAGGCTGGATTTTaGCAAGTTGAACAGACTGCT +
Preference number: 5 (lower is better)
Translates to: SPLPVLLGSTAKRMVFAVREAGF*QVEQTA
Trigger: AGCAGTCTGTTCAACTTGCAAAAATCCAGCCTCTCT...CACAGCAAACACCATTCTTTTTGCCGTACTTCCTAGAAGCACTGGAAGAGGACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS GCA 90 bp CCAATGTTCATGAACAAAACAAGGCAAAGTAAACAGCTAAGGCCATaGATCAAAGGTGAGCGTGAAGAACTCCAGCTCAGAAAAGGAAGG +
Preference number: 5 (lower is better)
Translates to: PMFMNKTRQSKQLRP*IKGEREELQLRKGR
Trigger: CCTTCCTTTTCTGAGCTGGAGTTCTTCACGCTCACCTTTGATGCATGGCCTTAGCTGTTTACTTTGCCTTGTTTTGTTCATGAACATTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000584437.5
CDS-3UTR CAA 90 bp AGAACTCTTTGTTGTCCCCGCTCAGCTGTAATTCTGCCTTTTCTACCTTCATTCAGCCAAGTCGTAGTTTaGGCCCTTCCTTTCTCTAAA +
Preference number: 5 (lower is better)
Translates to: RTLCCPRSAVILPFLPSFSQVVV*ALPFSK
Trigger: TTTAGAGAAAGGAAGGGCCAAAACTACGACTTGGCT...GAATGAAGGTAGAAAAGGCAGAATTACAGCTGAGCGGGGACAACAAAGAGTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000584437.5
CDS-3UTR CAA 90 bp AAACTTTTCCCAGAGAAGAACTCTTTGTTGTCCCCGCTCAGCTGTAATTCTGCCCAAAAAGAATGGTGTTaGCTGTGGTCCTTTCCTTTC +
Preference number: 5 (lower is better)
Translates to: KLFPEKNSLLSPLSCNSAQKEWC*LWSFPF
Trigger: GAAAGGAAAGGACCACAGCAAACACCATTCTTTTTG...GGCAGAATTACAGCTGAGCGGGGACAACAAAGAGTTCTTCTCTGGGAAAAGTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CAA 90 bp AGAACTCTTTGTTGTCCCCGCTCAGCTGTAATTCTGCCTTTTCTACCTTCATTCTCAGATCACTTGGCATaGCTCTTCCATATGCATCAA +
Preference number: 5 (lower is better)
Translates to: RTLCCPRSAVILPFLPSFSDHLA*LFHMHQ
Trigger: TTGATGCATATGGAAGAGCAATGCCAAGTGATCTGA...GAATGAAGGTAGAAAAGGCAGAATTACAGCTGAGCGGGGACAACAAAGAGTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000407977.7
ENST00000584437.5
CDS-3UTR CAA 90 bp AAGAACTCTTTGTTGTCCCCGCTCAGCTGTAATTCTGCCTTTTCTACCTTCATTCTGGATTTTTGCAAGTaGAACAGACTGCTGGTACTG +
Preference number: 5 (lower is better)
Translates to: KNSLLSPLSCNSAFSTFILDFCK*NRLLVL
Trigger: CAGTACCAGCAGTCTGTTCAACTTGCAAAAATCCAG...AATGAAGGTAGAAAAGGCAGAATTACAGCTGAGCGGGGACAACAAAGAGTTCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CAA 90 bp AAGAACTCTTTGTTGTCCCCGCTCAGCTGTAATTCTGCCTTTTCTACCTTCATTAGAGAGGCTGGATTTTaGCAAGTTGAACAGACTGCT +
Preference number: 5 (lower is better)
Translates to: KNSLLSPLSCNSAFSTFIREAGF*QVEQTA
Trigger: AGCAGTCTGTTCAACTTGCAAAAATCCAGCCTCTCT...AATGAAGGTAGAAAAGGCAGAATTACAGCTGAGCGGGGACAACAAAGAGTTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS-3UTR CAA 90 bp AAGAACTCTTTGTTGTCCCCGCTCAGCTGTAATTCTGCCTTTTCTACCTTCATTGAAATGCCGAGCACTTaGATTTCCCATGAGATGCTT +
Preference number: 5 (lower is better)
Translates to: KNSLLSPLSCNSAFSTFIEMPST*ISHEML
Trigger: AAGCATCTCATGGGAAATCAAAGTGCTCGGCATTTC...AATGAAGGTAGAAAAGGCAGAATTACAGCTGAGCGGGGACAACAAAGAGTTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000584437.5
CDS-3UTR CAA 90 bp AGAACTCTTTGTTGTCCCCGCTCAGCTGTAATTCTGCCTTTTCTACCTTCATTCATTATGTCAGATCACTaGGCATTGCTCTTCCATATG +
Preference number: 5 (lower is better)
Translates to: RTLCCPRSAVILPFLPSFIMSDH*ALLFHM
Trigger: CATATGGAAGAGCAATGCCAAGTGATCTGACATAAT...GAATGAAGGTAGAAAAGGCAGAATTACAGCTGAGCGGGGACAACAAAGAGTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000407977.7
ENST00000584437.5
CDS GCA 90 bp CGTGAATTTGTATTATGTCAGATCACTTGGCATTGCTCTTCCATATaGATCAAGTTGCCAGGCACTAAACCCAATGTTCATGAACAAAAC +
Preference number: 5 (lower is better)
Translates to: REFVLCQITWHCSSI*IKLPGTKPNVHEQN
Trigger: GTTTTGTTCATGAACATTGGGTTTAGTGCCTGGCAACTTGATGCATATGGAAGAGCAATGCCAAGTGATCTGACATAATACAAATTCACG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584437.5
CDS CCA 72 bp TCTGGCCACTCACCCCGGGCCTGCCTGCAGCTGGCCTaGTACCTCCTGGTGGCCAGCTGGCTGATGGCCCAG +
Preference number: 6 (lower is better)
Translates to: SGHSPRACLQLA*YLLVASWLMAQ
Trigger: CTGGGCCATCAGCCAGCTGGCCACCAGGAGGTACCAGGCCAGCTGCAGGCAGGCCCGGGGTGAGTGGCCAGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000407977.7
ENST00000577625.5
ENST00000577716.5
ENST00000581868.1
ENST00000583753.5
ENST00000584437.5
CDS CCA 72 bp GCTGCTGCTCTCCTGGAGCCCGGGGATGTGCAGCTCTaGGGAAGCGGTGATGCCGAGGGCCCATGCCTGGCT +
Preference number: 6 (lower is better)
Translates to: AAALLEPGDVQL*GSGDAEGPCLA
Trigger: AGCCAGGCATGGGCCCTCGGCATCACCGCTTCCCCAGAGCTGCACATCCCCGGGCTCCAGGAGAGCAGCAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000407977.7
ENST00000577625.5
ENST00000577716.5
ENST00000581868.1
ENST00000583753.5
ENST00000584437.5
CDS GCA 72 bp CCAGACAGATGGCACACACAGGGGCTGAGCTGCAGCTaGTCCCTGAGTCTGGCCACTCACCCCGGGCCTGCC +
Preference number: 6 (lower is better)
Translates to: PDRWHTQGLSCS*SLSLATHPGPA
Trigger: GGCAGGCCCGGGGTGAGTGGCCAGACTCAGGGAGCAGCTGCAGCTCAGCCCCTGTGTGTGCCATCTGTCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000407977.7
ENST00000577625.5
ENST00000577716.5
ENST00000581868.1
ENST00000583753.5
ENST00000584437.5
CDS GCA 72 bp GCTGCCAGTACCAGTCCTGTGCGTCCAAAGCCTGCCTaGAGGGTAGCCATCAGCAGCCAGGGCCAGAGGGCA +
Preference number: 6 (lower is better)
Translates to: AASTSPVRPKPA*RVAISSQGQRA
Trigger: TGCCCTCTGGCCCTGGCTGCTGATGGCTACCCTGCAGGCAGGCTTTGGACGCACAGGACTGGTACTGGCAGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS GCA 72 bp CACCTGGCAGTGCGGATAAGGGCATGGCCTGCCCTCTaGGGTGTCAGAACTCCATTCAGAAGGCCCCTCCCC +
Preference number: 6 (lower is better)
Translates to: HLAVRIRAWPAL*GVRTPFRRPLP
Trigger: GGGGAGGGGCCTTCTGAATGGAGTTCTGACACCGCAGAGGGCAGGCCATGCCCTTATCCGCACTGCCAGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000407977.7
ENST00000577625.5
ENST00000577716.5
ENST00000581868.1
ENST00000583753.5
ENST00000584437.5
CDS CCA 72 bp AATAGCTTTCTCCAGATCCACTGCTGTCAGGGGGCCTaGCCCGGCGTAGGGGCACTGGGCAAGCAGCAGGGT +
Preference number: 6 (lower is better)
Translates to: NSFLQIHCCQGA*PGVGALGKQQG
Trigger: ACCCTGCTGCTTGCCCAGTGCCCCTACGCCGGGCCAGGCCCCCTGACAGCAGTGGATCTGGAGAAAGCTATT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000407977.7
ENST00000577625.5
ENST00000577716.5
ENST00000581868.1
ENST00000583753.5
ENST00000584437.5
CDS TCA 72 bp AGAGCCGCCCCGAAGGGGCTGCTGAGTTGGATCTGGTaGCTTGCTGATCAGGAGAAGGTGGCTCTGGCTGGG +
Preference number: 6 (lower is better)
Translates to: RAAPKGLLSWIW*LADQEKVALAG
Trigger: CCCAGCCAGAGCCACCTTCTCCTGATCAGCAAGTCACCAGATCCAACTCAGCAGCCCCTTCGGGGCGGCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000407977.7
ENST00000577625.5
ENST00000577716.5
ENST00000581868.1
ENST00000583753.5
ENST00000584437.5
CDS GCA 72 bp CACTGCGTTCTGTGCAATAGCTTTCTCCAGATCCACTaGTGTCAGGGGGCCTGGCCCGGCGTAGGGGCACTG +
Preference number: 6 (lower is better)
Translates to: HCVLCNSFLQIH*CQGAWPGVGAL
Trigger: CAGTGCCCCTACGCCGGGCCAGGCCCCCTGACAGCAGTGGATCTGGAGAAAGCTATTGCACAGAACGCAGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000407977.7
ENST00000577625.5
ENST00000577716.5
ENST00000581868.1
ENST00000583753.5
ENST00000584437.5
CDS GCA 72 bp CCGACAGCACCTGGCAGTGCGGATAAGGGCATGGCCTaGCCTCTGCGGTGTCAGAACTCCATTCAGAAGGCC +
Preference number: 6 (lower is better)
Translates to: PTAPGSADKGMA*PLRCQNSIQKA
Trigger: GGCCTTCTGAATGGAGTTCTGACACCGCAGAGGGCAGGCCATGCCCTTATCCGCACTGCCAGGTGCTGTCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000407977.7
ENST00000577625.5
ENST00000577716.5
ENST00000581868.1
ENST00000583753.5
ENST00000584437.5
CDS CCA 72 bp TGGAAGAGCCATGACAGGGCCCTGAGCTGGAGTCACTaGCTGGCCCATCTGCCAGGTACCCACTGCGTTCTG +
Preference number: 6 (lower is better)
Translates to: WKSHDRALSWSH*LAHLPGTHCVL
Trigger: CAGAACGCAGTGGGTACCTGGCAGATGGGCCAGCCAGTGACTCCAGCTCAGGGCCCTGTCATGGCTCTTCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000407977.7
ENST00000577625.5
ENST00000577716.5
ENST00000581868.1
ENST00000583753.5
ENST00000584437.5
CDS CCA 72 bp GGCCGAGAGGTCACACTAGGCTGCATGTCCACTCGCTaGGGATCCCCTTTAGGGCTGCAGTACACTAGGGGG +
Preference number: 6 (lower is better)
Translates to: GREVTLGCMSTR*GSPLGLQYTRG
Trigger: CCCCCTAGTGTACTGCAGCCCTAAAGGGGATCCCCAGCGAGTGGACATGCAGCCTAGTGTGACCTCTCGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000407977.7
ENST00000577625.5
ENST00000577716.5
ENST00000581868.1
ENST00000583753.5
ENST00000584437.5
CDS CCA 72 bp AGGAATAGGAGGCCTGGACTGGGGGACTCCGGTTTCTaGGCCAGGCTTCCTGCCATGCCACTGGAACCGCTT +
Preference number: 6 (lower is better)
Translates to: RNRRPGLGDSGF*ARLPAMPLEPL
Trigger: AAGCGGTTCCAGTGGCATGGCAGGAAGCCTGGCCCAGAAACCGGAGTCCCCCAGTCCAGGCCTCCTATTCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000407977.7
ENST00000577625.5
ENST00000577716.5
ENST00000581868.1
ENST00000583753.5
ENST00000584437.5
CDS TCA 72 bp CATGAGCCATCACACCCGGCCTTCCAAGTGCCTTTCTaGTGCCTCAGCCACACCAGCACCTCCCTGGGACCT +
Preference number: 6 (lower is better)
Translates to: HEPSHPAFQVPF*CLSHTSTSLGP
Trigger: AGGTCCCAGGGAGGTGCTGGTGTGGCTGAGGCATCAGAAAGGCACTTGGAAGGCCGGGTGTGATGGCTCATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581868.1
CDS GCA 72 bp GAGTCCAAGGAACGAGGCCGAGAGGTCACACTAGGCTaGATGTCCACTCGCTGGGGATCCCCTTTAGGGCTG +
Preference number: 6 (lower is better)
Translates to: ESKERGREVTLG*MSTRWGSPLGL
Trigger: CAGCCCTAAAGGGGATCCCCAGCGAGTGGACATGCAGCCTAGTGTGACCTCTCGGCCTCGTTCCTTGGACTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000407977.7
ENST00000577625.5
ENST00000577716.5
ENST00000581868.1
ENST00000583753.5
ENST00000584437.5
CDS GCA 72 bp AGGGCTAAGTGCAGGGCAAGGTCTGGAGGTCTAGTGTaGTTACCCAGGCCGGGGGCTCCTTCAGCTCAATCC +
Preference number: 6 (lower is better)
Translates to: RAKCRARSGGLV*LPRPGAPSAQS
Trigger: GGATTGAGCTGAAGGAGCCCCCGGCCTGGGTAAGCACACTAGACCTCCAGACCTTGCCCTGCACTTAGCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000582293.1
CDS TCA 72 bp GCTGCTGCAGCTGCTCAGCAGCAGCTCGATCCTCAGTaGTGTCAAAGAGGACAGCACTGGCTCCTCGCTCAC +
Preference number: 6 (lower is better)
Translates to: AAAAAQQQLDPQ*CQRGQHWLLAH
Trigger: GTGAGCGAGGAGCCAGTGCTGTCCTCTTTGACATCACTGAGGATCGAGCTGCTGCTGAGCAGCTGCAGCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000407977.7
ENST00000577625.5
ENST00000577716.5
ENST00000581868.1
ENST00000582293.1
ENST00000583753.5
ENST00000584437.5
CDS TCA 72 bp GCACTGTGGGTTAGAGAGCCGCCCCGAAGGGGCTGCTaGGTTGGATCTGGTGACTTGCTGATCAGGAGAAGG +
Preference number: 6 (lower is better)
Translates to: ALWVREPPRRGC*VGSGDLLIRRR
Trigger: CCTTCTCCTGATCAGCAAGTCACCAGATCCAACTCAGCAGCCCCTTCGGGGCGGCTCTCTAACCCACAGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000407977.7
ENST00000577625.5
ENST00000577716.5
ENST00000581868.1
ENST00000583753.5
ENST00000584437.5
CDS GCA 72 bp TGGACTGGGGGACTCCGGTTTCTGGGCCAGGCTTCCTaGCATGCCACTGGAACCGCTTTTTGTAGTGGTGGT +
Preference number: 6 (lower is better)
Translates to: WTGGLRFLGQAS*HATGTAFCSGG
Trigger: ACCACCACTACAAAAAGCGGTTCCAGTGGCATGGCAGGAAGCCTGGCCCAGAAACCGGAGTCCCCCAGTCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000407977.7
ENST00000577625.5
ENST00000577716.5
ENST00000581868.1
ENST00000583753.5
ENST00000584437.5
CDS CCA 72 bp GCCGGGATGCTGGCGAATGAGGTGGAGTCTTCGACCTaGTTCTTGGTAAGATCGAGAGGGTCCCAGGGACTG +
Preference number: 6 (lower is better)
Translates to: AGMLANEVESST*FLVRSRGSQGL
Trigger: CAGTCCCTGGGACCCTCTCGATCTTACCAAGAACCAGGTCGAAGACTCCACCTCATTCGCCAGCATCCCGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000407977.7
ENST00000577625.5
ENST00000577716.5
ENST00000581868.1
ENST00000583753.5
ENST00000584437.5
CDS CCA 72 bp CAGGCCTGGAGGTCCACAGATCAAGGGGTGTGCCTCTaGGGACCAAGGATATGCCACACTGGGGGTGTAATG +
Preference number: 6 (lower is better)
Translates to: QAWRSTDQGVCL*GPRICHTGGVM
Trigger: CATTACACCCCCAGTGTGGCATATCCTTGGTCCCCAGAGGCACACCCCTTGATCTGTGGACCTCCAGGCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000407977.7
ENST00000577625.5
ENST00000577716.5
ENST00000581868.1
ENST00000583753.5
ENST00000584437.5
CDS CAA 90 bp ACGATGCTGATGAATCCAGGCTCCAGATTGTCGTCATCACTGGCATaGCACAGGTACAGCGGGTGGGACTGTTGCGCTGTCGGGCCCACT +
Preference number: 6 (lower is better)
Translates to: TMLMNPGSRLSSSLA*HRYSGWDCCAVGPT
Trigger: AGTGGGCCCGACAGCGCAACAGTCCCACCCGCTGTACCTGTGCAATGCCAGTGATGACGACAATCTGGAGCCTGGATTCATCAGCATCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581868.1
CDS TCA 72 bp GGAGGTGGTAGTGGGCATGGCCGGGATGCTGGCGAATaGGGTGGAGTCTTCGACCTGGTTCTTGGTAAGATC +
Preference number: 6 (lower is better)
Translates to: GGGSGHGRDAGE*GGVFDLVLGKI
Trigger: GATCTTACCAAGAACCAGGTCGAAGACTCCACCTCATTCGCCAGCATCCCGGCCATGCCCACTACCACCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000407977.7
ENST00000577625.5
ENST00000577716.5
ENST00000581868.1
ENST00000583753.5
ENST00000584437.5
CDS GCA 72 bp TGGCTGGCCCATCTGCCAGGTACCCACTGCGTTCTGTaGAATAGCTTTCTCCAGATCCACTGCTGTCAGGGG +
Preference number: 6 (lower is better)
Translates to: WLAHLPGTHCVL*NSFLQIHCCQG
Trigger: CCCCTGACAGCAGTGGATCTGGAGAAAGCTATTGCACAGAACGCAGTGGGTACCTGGCAGATGGGCCAGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000407977.7
ENST00000577625.5
ENST00000577716.5
ENST00000581868.1
ENST00000583753.5
ENST00000584437.5
CDS TCA 72 bp GTGGGTGTCGGGCAGAGAGGCTGGATTTTTGCAAGTTaGACAGACTGCTGGTACTGGGGCAGATGCTGGAGG +
Preference number: 6 (lower is better)
Translates to: VGVGQRGWIFAS*TDCWYWGRCWR
Trigger: CCTCCAGCATCTGCCCCAGTACCAGCAGTCTGTTCAACTTGCAAAAATCCAGCCTCTCTGCCCGACACCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000407977.7
ENST00000577625.5
ENST00000577716.5
ENST00000581868.1
ENST00000583753.5
ENST00000584437.5
CDS CCA 72 bp CTGCTTAGGGAGCTGCAGAAAGTAGAACTGCTGCCATaGACCCCCTGTAGGCTGATGTCCGTGCAGTTGACC +
Preference number: 6 (lower is better)
Translates to: LLRELQKVELLP*TPCRLMSVQLT
Trigger: GGTCAACTGCACGGACATCAGCCTACAGGGGGTCCATGGCAGCAGTTCTACTTTCTGCAGCTCCCTAAGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000407977.7
ENST00000577625.5
ENST00000577716.5
ENST00000581868.1
ENST00000583753.5
ENST00000584437.5
CDS CAA 72 bp TGTGGGTGTCGGGCAGAGAGGCTGGATTTTTGCAAGTaGAACAGACTGCTGGTACTGGGGCAGATGCTGGAG +
Preference number: 6 (lower is better)
Translates to: CGCRAERLDFCK*NRLLVLGQMLE
Trigger: CTCCAGCATCTGCCCCAGTACCAGCAGTCTGTTCAACTTGCAAAAATCCAGCCTCTCTGCCCGACACCCACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000407977.7
ENST00000577625.5
ENST00000577716.5
ENST00000581868.1
ENST00000583753.5
ENST00000584437.5
CDS CAA 72 bp TGCCAGGTAGGGCCCAAACACATCTGGAGCACACTCTaGGTTGGAGCTAGGCCTGAACATCTCACACAGCCT +
Preference number: 6 (lower is better)
Translates to: CQVGPKHIWSTL*VGARPEHLTQP
Trigger: AGGCTGTGTGAGATGTTCAGGCCTAGCTCCAACCAAGAGTGTGCTCCAGATGTGTTTGGGCCCTACCTGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000583753.5
ENST00000584437.5
CDS CAA 72 bp ATGAATCCAGGCTCCAGATTGTCGTCATCACTGGCATaGCACAGGTACAGCGGGTGGGACTGTTGCGCTGTC +
Preference number: 6 (lower is better)
Translates to: MNPGSRLSSSLA*HRYSGWDCCAV
Trigger: GACAGCGCAACAGTCCCACCCGCTGTACCTGTGCAATGCCAGTGATGACGACAATCTGGAGCCTGGATTCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581868.1
CDS GCA 72 bp TTCCTCTGTGGGTGTCGGGCAGAGAGGCTGGATTTTTaGAAGTTGAACAGACTGCTGGTACTGGGGCAGATG +
Preference number: 6 (lower is better)
Translates to: FLCGCRAERLDF*KLNRLLVLGQM
Trigger: CATCTGCCCCAGTACCAGCAGTCTGTTCAACTTGCAAAAATCCAGCCTCTCTGCCCGACACCCACAGAGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000407977.7
ENST00000577625.5
ENST00000577716.5
ENST00000581868.1
ENST00000583753.5
ENST00000584437.5
CDS CCA 72 bp CAGGATCTCTCGCAGCTCCAGGAGTCTAAGGGCTTTTaGTGGGAGTTGCCACAGGACAAAGTAGGGCTAAGT +
Preference number: 6 (lower is better)
Translates to: QDLSQLQESKGF*WELPQDKVGLS
Trigger: ACTTAGCCCTACTTTGTCCTGTGGCAACTCCCACCAAAAGCCCTTAGACTCCTGGAGCTGCGAGAGATCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582293.1
CDS CAA 72 bp ATGCTGGCGAATGAGGTGGAGTCTTCGACCTGGTTCTaGGTAAGATCGAGAGGGTCCCAGGGACTGGGAAAA +
Preference number: 6 (lower is better)
Translates to: MLANEVESSTWF*VRSRGSQGLGK
Trigger: TTTTCCCAGTCCCTGGGACCCTCTCGATCTTACCAAGAACCAGGTCGAAGACTCCACCTCATTCGCCAGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000407977.7
ENST00000577625.5
ENST00000577716.5
ENST00000581868.1
ENST00000583753.5
ENST00000584437.5
CDS CCA 72 bp GGGGGCTCCTTCAGCTCAATCCTCACATGGGCCTTTTaGTTCTTGTACACAAACTCCATCAGCTTCTCAGCG +
Preference number: 6 (lower is better)
Translates to: GGSFSSILTWAF*FLYTNSISFSA
Trigger: CGCTGAGAAGCTGATGGAGTTTGTGTACAAGAACCAAAAGGCCCATGTGAGGATTGAGCTGAAGGAGCCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000407977.7
ENST00000577625.5
ENST00000577716.5
ENST00000581868.1
ENST00000582293.1
ENST00000583753.5
ENST00000584437.5
CDS CAA 72 bp TTTCCTCTGTGGGTGTCGGGCAGAGAGGCTGGATTTTaGCAAGTTGAACAGACTGCTGGTACTGGGGCAGAT +
Preference number: 6 (lower is better)
Translates to: FPLWVSGREAGF*QVEQTAGTGAD
Trigger: ATCTGCCCCAGTACCAGCAGTCTGTTCAACTTGCAAAAATCCAGCCTCTCTGCCCGACACCCACAGAGGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000407977.7
ENST00000577625.5
ENST00000577716.5
ENST00000581868.1
ENST00000583753.5
ENST00000584437.5
CDS CAA 90 bp ACGATGCTGATGAATCCAGGCTCCAGATTGTCGTCATCACTGGCATaGCACAGGTACAGCGGGTGGGACTGCATTAATTTTCCTTCTGCT +
Preference number: 6 (lower is better)
Translates to: TMLMNPGSRLSSSLA*HRYSGWDCINFPSA
Trigger: AGCAGAAGGAAAATTAATGCAGTCCCACCCGCTGTACCTGTGCAATGCCAGTGATGACGACAATCTGGAGCCTGGATTCATCAGCATCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000584437.5
CDS TCA 72 bp CTGTTGCGCTGTCGGGCCCACTGGAATCCACGGGGGTaGAACAAATTCAATTATGCTTTTACAGATCCTGCT +
Preference number: 6 (lower is better)
Translates to: LLRCRAHWNPRG*NKFNYAFTDPA
Trigger: AGCAGGATCTGTAAAAGCATAATTGAATTTGTTTCACCCCCGTGGATTCCAGTGGGCCCGACAGCGCAACAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000580014.1
ENST00000584437.5
CDS CAA 72 bp ATGAATCCAGGCTCCAGATTGTCGTCATCACTGGCATaGCACAGGTACAGCGGGTGGGACCAGAAGATAATT +
Preference number: 6 (lower is better)
Translates to: MNPGSRLSSSLA*HRYSGWDQKII
Trigger: AATTATCTTCTGGTCCCACCCGCTGTACCTGTGCAATGCCAGTGATGACGACAATCTGGAGCCTGGATTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577625.5
CDS CCA 72 bp ACAATTCTGGATCAACTCCCTAGAGCAGGAAGCCTGTaGTTTGTAATTGGTGTTCTAGCTCTGACTCCCTCC +
Preference number: 6 (lower is better)
Translates to: TILDQLPRAGSL*FVIGVLALTPS
Trigger: GGAGGGAGTCAGAGCTAGAACACCAATTACAAACCACAGGCTTCCTGCTCTAGGGAGTTGATCCAGAATTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580014.1
CDS CAA 72 bp ATGAATCCAGGCTCCAGATTGTCGTCATCACTGGCATaGCACAGGTACAGCGGGTGGGACTGCATTAATTTT +
Preference number: 6 (lower is better)
Translates to: MNPGSRLSSSLA*HRYSGWDCINF
Trigger: AAAATTAATGCAGTCCCACCCGCTGTACCTGTGCAATGCCAGTGATGACGACAATCTGGAGCCTGGATTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000584437.5
CDS CAA 90 bp CTGCACTCTAGCCAGCATGATACGCTGTCCCGATGGTTAAGTATTTaGGTTGTCATCTCTGCTGTATCCTTCTCAGCTTCCATCAACCCT +
Preference number: 6 (lower is better)
Translates to: LHSSQHDTLSRWLSI*VVISAVSFSASINP
Trigger: AGGGTTGATGGAAGCTGAGAAGGATACAGCAGAGATGACAACCAAAATACTTAACCATCGGGACAGCGTATCATGCTGGCTAGAGTGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581868.1
CDS CAA 90 bp GTTGTCATCTCTGCTGTATCCTTCTCAGCTTCCATCAACCCTTTGTaGGCTGACTTCACCTGTCCTGAAATATTCAGCTGTAGTCTCCTC +
Preference number: 6 (lower is better)
Translates to: VVISAVSFSASINPL*ADFTCPEIFSCSLL
Trigger: GAGGAGACTACAGCTGAATATTTCAGGACAGGTGAAGTCAGCCAACAAAGGGTTGATGGAAGCTGAGAAGGATACAGCAGAGATGACAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581868.1
CDS CCA 72 bp TTCCTGCACTCTAGCCAGCATGATACGCTGTCCCGATaGTTAAGTATTTTGGTTGTCATCTCTGCTGTATCC +
Preference number: 6 (lower is better)
Translates to: FLHSSQHDTLSR*LSILVVISAVS
Trigger: GGATACAGCAGAGATGACAACCAAAATACTTAACCATCGGGACAGCGTATCATGCTGGCTAGAGTGCAGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581868.1
CDS CAA 72 bp AGCCAGCATGATACGCTGTCCCGATGGTTAAGTATTTaGGTTGTCATCTCTGCTGTATCCTTCTCAGCTTCC +
Preference number: 6 (lower is better)
Translates to: SQHDTLSRWLSI*VVISAVSFSAS
Trigger: GGAAGCTGAGAAGGATACAGCAGAGATGACAACCAAAATACTTAACCATCGGGACAGCGTATCATGCTGGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581868.1
CDS CAA 90 bp TTGGTTGTCATCTCTGCTGTATCCTTCTCAGCTTCCATCAACCCTTaGTTGGCTGACTTCACCTGTCCTGAAATATTCAGCTGTAGTCTC +
Preference number: 6 (lower is better)
Translates to: LVVISAVSFSASINP*LADFTCPEIFSCSL
Trigger: GAGACTACAGCTGAATATTTCAGGACAGGTGAAGTCAGCCAACAAAGGGTTGATGGAAGCTGAGAAGGATACAGCAGAGATGACAACCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581868.1
CDS CCA 72 bp CTGCTGTATCCTTCTCAGCTTCCATCAACCCTTTGTTaGCTGACTTCACCTGTCCTGAAATATTCAGCTGTA +
Preference number: 6 (lower is better)
Translates to: LLYPSQLPSTLC*LTSPVLKYSAV
Trigger: TACAGCTGAATATTTCAGGACAGGTGAAGTCAGCCAACAAAGGGTTGATGGAAGCTGAGAAGGATACAGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581868.1
CDS CAA 72 bp TCCTTCAGCTCAATCCTCACATGGGCCTTTTGGTTCTaGTACACAAACTCCATCAGCTTCTCAGCGTCATTA +
Preference number: 6 (lower is better)
Translates to: SFSSILTWAFWF*YTNSISFSASL
Trigger: TAATGACGCTGAGAAGCTGATGGAGTTTGTGTACAAGAACCAAAAGGCCCATGTGAGGATTGAGCTGAAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000407977.7
ENST00000577625.5
ENST00000577716.5
ENST00000581868.1
ENST00000582293.1
ENST00000583753.5
ENST00000584437.5
CDS GCA 72 bp GCTGTCCCGATGGTTAAGTATTTTGGTTGTCATCTCTaGTGTATCCTTCTCAGCTTCCATCAACCCTTTGTT +
Preference number: 6 (lower is better)
Translates to: AVPMVKYFGCHL*CILLSFHQPFV
Trigger: AACAAAGGGTTGATGGAAGCTGAGAAGGATACAGCAGAGATGACAACCAAAATACTTAACCATCGGGACAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581868.1
CDS GCA 72 bp ATGAACAAAACAAGGCAAAGTAAACAGCTAAGGCCATaGATCAAAGGTGAGCGTGAAGAACTCCAGCTCAGA +
Preference number: 6 (lower is better)
Translates to: MNKTRQSKQLRP*IKGEREELQLR
Trigger: TCTGAGCTGGAGTTCTTCACGCTCACCTTTGATGCATGGCCTTAGCTGTTTACTTTGCCTTGTTTTGTTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584437.5
CDS TCA 72 bp CTGCTGCAGGTATGTCATTTTCTCCCATCTTCACTGTaGCTAGTAAAGATCTCACCACTTCTCTTTGGAATT +
Preference number: 6 (lower is better)
Translates to: LLQVCHFLPSSL*LVKISPLLFGI
Trigger: AATTCCAAAGAGAAGTGGTGAGATCTTTACTAGTCACAGTGAAGATGGGAGAAAATGACATACCTGCAGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407977.7
ENST00000584437.5
CDS GCA 72 bp CTTCGTGAATTTGTATTATGTCAGATCACTTGGCATTaGTCTTCCATATGCATCAAGTTGCCAGGCACTGTT +
Preference number: 6 (lower is better)
Translates to: LREFVLCQITWH*SSICIKLPGTV
Trigger: AACAGTGCCTGGCAACTTGATGCATATGGAAGAGCAATGCCAAGTGATCTGACATAATACAAATTCACGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407977.7
CDS CCA 72 bp ATGTCACTTCGTGAATTTGTATTATGTCAGATCACTTaGCATTGCTCTTCCATATGCATCAAGTTGCCAGGC +
Preference number: 6 (lower is better)
Translates to: MSLREFVLCQIT*HCSSICIKLPG
Trigger: GCCTGGCAACTTGATGCATATGGAAGAGCAATGCCAAGTGATCTGACATAATACAAATTCACGAAGTGACAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000407977.7
ENST00000584437.5
CDS GCA 72 bp CTTCGTGAATTTGTATTATGTCAGATCACTTGGCATTaGTCTTCCATATGCATCAAGTTGCCAGGCACTAAA +
Preference number: 6 (lower is better)
Translates to: LREFVLCQITWH*SSICIKLPGTK
Trigger: TTTAGTGCCTGGCAACTTGATGCATATGGAAGAGCAATGCCAAGTGATCTGACATAATACAAATTCACGAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584437.5
CDS CAA 90 bp GAAAAGAACATTTATGCTTCCGTTTCAGAAAGCCAAGTCGTAGTTTaGGCCCTTCCTTTCTCTAAAGTTTATTCCCAAAAACAGGTAGCA +
Preference number: 6 (lower is better)
Translates to: EKNIYASVSESQVVV*ALPFSKVYSQKQVA
Trigger: TGCTACCTGTTTTTGGGAATAAACTTTAGAGAAAGGAAGGGCCAAAACTACGACTTGGCTTTCTGAAACGGAAGCATAAATGTTCTTTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000584437.5
CDS CAA 72 bp CCAACTTTGCTTGTGATTGAATGTCACTTCGTGAATTaGTATTATGTCAGATCACTTGGCATTGCTCTTCCA +
Preference number: 6 (lower is better)
Translates to: PTLLVIECHFVN*YYVRSLGIALP
Trigger: TGGAAGAGCAATGCCAAGTGATCTGACATAATACAAATTCACGAAGTGACATTCAATCACAAGCAAAGTTGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000407977.7
ENST00000584437.5
CDS CAA 72 bp ATTTATGCTTCCGTTTCAGAAAGCCAAGTCGTAGTTTaGGCCCTTCCTTTCTCTAAAGTTTATTCCCAAAAA +
Preference number: 6 (lower is better)
Translates to: IYASVSESQVVV*ALPFSKVYSQK
Trigger: TTTTTGGGAATAAACTTTAGAGAAAGGAAGGGCCAAAACTACGACTTGGCTTTCTGAAACGGAAGCATAAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407977.7
ENST00000577716.5
ENST00000584437.5
CDS CAA 90 bp TTGGAATTTCCAACTTTGCTTGTGATTGAATGTCACTTCGTGAATTaGTATTATGTCAGATCACTTGGCATTGCTCTTCCATATGCATCA +
Preference number: 6 (lower is better)
Translates to: LEFPTLLVIECHFVN*YYVRSLGIALPYAS
Trigger: TGATGCATATGGAAGAGCAATGCCAAGTGATCTGACATAATACAAATTCACGAAGTGACATTCAATCACAAGCAAAGTTGGAAATTCCAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000407977.7
ENST00000584437.5