RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RNF41 (Homo sapiens)

Ensembl gene IDs: ENSG00000181852

Ensembl transcript IDs: ENST00000345093.9, ENST00000394013.6, ENST00000547967.5, ENST00000548120.1, ENST00000548225.1, ENST00000549038.5, ENST00000549119.1, ENST00000550379.1, ENST00000551711.5, ENST00000552244.5, ENST00000552656.5, ENST00000615206.4

Found 705 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TCACAGGTCACAGGCCGCTTCGGGTTGTGCTCACAGTCGCTGAGGTaGGACATGAGGTTGTCAAGCCGGACAACGGCACTACAGCCGAAC +
Preference number: 1 (lower is better)
Translates to: SQVTGRFGLCSQSLR*DMRLSSRTTALQPN
Trigger: GTTCGGCTGTAGTGCCGTTGTCCGGCTTGACAACCTCATGTCTCACCTCAGCGACTGTGAGCACAACCCGAAGCGGCCTGTGACCTGTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549119.1
3UTR TCA 90 bp TGTCTTGGGGCCTACCTGCTCCGCCAGCTGGTGTTTGTGTTCAGCTaGCGTCTTCTCCAGCTCTGCGATGCGTGTCTGCTGCTGCTGTAC +
Preference number: 1 (lower is better)
Translates to: CLGAYLLRQLVFVFS*RLLQLCDACLLLLY
Trigger: GTACAGCAGCAGCAGACACGCATCGCAGAGCTGGAGAAGACGTCAGCTGAACACAAACACCAGCTGGCGGAGCAGGTAGGCCCCAAGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549119.1
3UTR CCA 90 bp AGGTACTGGGCGCAGATGGGCGACCGTCACAACACTACGGTCCACTaGACATGTCTGTTGCTGAGAGAACCACTGGGTGATGCAGGCGTT +
Preference number: 1 (lower is better)
Translates to: RYWAQMGDRHNTTVH*TCLLLREPLGDAGV
Trigger: AACGCCTGCATCACCCAGTGGTTCTCTCAGCAACAGACATGTCCAGTGGACCGTAGTGTTGTGACGGTCGCCCATCTGCGCCCAGTACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549119.1
3UTR TCA 90 bp GGCACTACAGCCGAACACAGCGTTGTCACAGGCAATCTGCAGCTTTaGCAACATGTTCCGCATGATCCGAGGTACTGGGCGCAGATGGGC +
Preference number: 1 (lower is better)
Translates to: GTTAEHSVVTGNLQL*QHVPHDPRYWAQMG
Trigger: GCCCATCTGCGCCCAGTACCTCGGATCATGCGGAACATGTTGTCAAAGCTGCAGATTGCCTGTGACAACGCTGTGTTCGGCTGTAGTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549119.1
3UTR GCA 90 bp CGGACAACGGCACTACAGCCGAACACAGCGTTGTCACAGGCAATCTaGAGCTTTGACAACATGTTCCGCATGATCCGAGGTACTGGGCGC +
Preference number: 1 (lower is better)
Translates to: RTTALQPNTALSQAI*SFDNMFRMIRGTGR
Trigger: GCGCCCAGTACCTCGGATCATGCGGAACATGTTGTCAAAGCTGCAGATTGCCTGTGACAACGCTGTGTTCGGCTGTAGTGCCGTTGTCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549119.1
3UTR CCA 90 bp GTCTGCTGCTGCTGTACCACTGAGCGCAGGTGCTTAATGCAGTTATaGTTGGGCAGCTCATCTTTGGGCATCTCCAGGCCACAGCCCTGT +
Preference number: 1 (lower is better)
Translates to: VCCCCTTERRCLMQL*LGSSSLGISRPQPC
Trigger: ACAGGGCTGTGGCCTGGAGATGCCCAAAGATGAGCTGCCCAACCATAACTGCATTAAGCACCTGCGCTCAGTGGTACAGCAGCAGCAGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549119.1
3UTR TCA 90 bp CAGCGTTGTCACAGGCAATCTGCAGCTTTGACAACATGTTCCGCATaGTCCGAGGTACTGGGCGCAGATGGGCGACCGTCACAACACTAC +
Preference number: 1 (lower is better)
Translates to: QRCHRQSAALTTCSA*SEVLGADGRPSQHY
Trigger: GTAGTGTTGTGACGGTCGCCCATCTGCGCCCAGTACCTCGGATCATGCGGAACATGTTGTCAAAGCTGCAGATTGCCTGTGACAACGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549119.1
3UTR GCA 90 bp AGCTCTGCGATGCGTGTCTGCTGCTGCTGTACCACTGAGCGCAGGTaGTTAATGCAGTTATGGTTGGGCAGCTCATCTTTGGGCATCTCC +
Preference number: 1 (lower is better)
Translates to: SSAMRVCCCCTTERR*LMQLWLGSSSLGIS
Trigger: GGAGATGCCCAAAGATGAGCTGCCCAACCATAACTGCATTAAGCACCTGCGCTCAGTGGTACAGCAGCAGCAGACACGCATCGCAGAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549119.1
3UTR GCA 90 bp TGTTCAGCTGACGTCTTCTCCAGCTCTGCGATGCGTGTCTGCTGCTaGTGTACCACTGAGCGCAGGTGCTTAATGCAGTTATGGTTGGGC +
Preference number: 1 (lower is better)
Translates to: CSADVFSSSAMRVCC*CTTERRCLMQLWLG
Trigger: GCCCAACCATAACTGCATTAAGCACCTGCGCTCAGTGGTACAGCAGCAGCAGACACGCATCGCAGAGCTGGAGAAGACGTCAGCTGAACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549119.1
3UTR CCA 90 bp AGCTTTGACAACATGTTCCGCATGATCCGAGGTACTGGGCGCAGATaGGCGACCGTCACAACACTACGGTCCACTGGACATGTCTGTTGC +
Preference number: 1 (lower is better)
Translates to: SFDNMFRMIRGTGRR*ATVTTLRSTGHVCC
Trigger: GCAACAGACATGTCCAGTGGACCGTAGTGTTGTGACGGTCGCCCATCTGCGCCCAGTACCTCGGATCATGCGGAACATGTTGTCAAAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549119.1
3UTR TCA 90 bp CGTCTTCTCCAGCTCTGCGATGCGTGTCTGCTGCTGCTGTACCACTaGGCGCAGGTGCTTAATGCAGTTATGGTTGGGCAGCTCATCTTT +
Preference number: 1 (lower is better)
Translates to: RLLQLCDACLLLLYH*AQVLNAVMVGQLIF
Trigger: AAAGATGAGCTGCCCAACCATAACTGCATTAAGCACCTGCGCTCAGTGGTACAGCAGCAGCAGACACGCATCGCAGAGCTGGAGAAGACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549119.1
3UTR GCA 90 bp ACCCAGTGGGTGCCTACACCTTTAAGGTGGGCTGAACAGGGATACTaGTTGGCACAGAGGTCCAGTCTTTCCCTAAGGGCCATCAGTGAT +
Preference number: 1 (lower is better)
Translates to: TQWVPTPLRWAEQGY*LAQRSSLSLRAISD
Trigger: ATCACTGATGGCCCTTAGGGAAAGACTGGACCTCTGTGCCAAGCAGTATCCCTGTTCAGCCCACCTTAAAGGTGTAGGCACCCACTGGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
3UTR TCA 90 bp TGCATACTGGTAGACCCAGTGGGTGCCTACACCTTTAAGGTGGGCTaGACAGGGATACTGCTTGGCACAGAGGTCCAGTCTTTCCCTAAG +
Preference number: 1 (lower is better)
Translates to: CILVDPVGAYTFKVG*TGILLGTEVQSFPK
Trigger: CTTAGGGAAAGACTGGACCTCTGTGCCAAGCAGTATCCCTGTTCAGCCCACCTTAAAGGTGTAGGCACCCACTGGGTCTACCAGTATGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
3UTR GCA 90 bp TTGTGTTCAGCTGACGTCTTCTCCAGCTCTGCGATGCGTGTCTGCTaGTGCTGTACCACTGAGCGCAGGTGCTTAATGCAGTTATGGTTG +
Preference number: 1 (lower is better)
Translates to: LCSADVFSSSAMRVC*CCTTERRCLMQLWL
Trigger: CAACCATAACTGCATTAAGCACCTGCGCTCAGTGGTACAGCAGCAGCAGACACGCATCGCAGAGCTGGAGAAGACGTCAGCTGAACACAA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549119.1
3UTR GCA 90 bp TGTTTGTGTTCAGCTGACGTCTTCTCCAGCTCTGCGATGCGTGTCTaGTGCTGCTGTACCACTGAGCGCAGGTGCTTAATGCAGTTATGG +
Preference number: 1 (lower is better)
Translates to: CLCSADVFSSSAMRV*CCCTTERRCLMQLW
Trigger: CCATAACTGCATTAAGCACCTGCGCTCAGTGGTACAGCAGCAGCAGACACGCATCGCAGAGCTGGAGAAGACGTCAGCTGAACACAAACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549119.1
3UTR CCA 90 bp CAGGAAGAGAGGAAGCTCCTCATTTCAGTTGGGGTTACAGAGGTTTaGGGCAGATATCGTAAGTTCAGCCGAGGACTCCCTTGGCTCTTC +
Preference number: 1 (lower is better)
Translates to: QEERKLLISVGVTEV*GRYRKFSRGLPWLF
Trigger: GAAGAGCCAAGGGAGTCCTCGGCTGAACTTACGATATCTGCCCCAAACCTCTGTAACCCCAACTGAAATGAGGAGCTTCCTCTCTTCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345093.9
ENST00000615206.4
3UTR CCA 90 bp CAGTGGAGCCATGATCCAACTACCCAGACCTGCAGCAAGCTAGCCTaGAATAAAATTCTGAGAGGAAGCCATTACATGGTGGGGAGGAGC +
Preference number: 1 (lower is better)
Translates to: QWSHDPTTQTCSKLA*NKILRGSHYMVGRS
Trigger: GCTCCTCCCCACCATGTAATGGCTTCCTCTCAGAATTTTATTCCAGGCTAGCTTGCTGCAGGTCTGGGTAGTTGGATCATGGCTCCACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345093.9
ENST00000615206.4
3UTR CCA 90 bp CTCTTATATCTCTTCCACGCCATGCGCAAATATCATGACAAGGCCTaGCTCTTGCACCATGTCATCCCCCATGTGCTGGTTCTCACAGGC +
Preference number: 1 (lower is better)
Translates to: LLYLFHAMRKYHDKA*LLHHVIPHVLVLTG
Trigger: GCCTGTGAGAACCAGCACATGGGGGATGACATGGTGCAAGAGCCAGGCCTTGTCATGATATTTGCGCATGGCGTGGAAGAGATATAAGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000547967.5
3UTR TCA 90 bp CAGTCGAGTTCTCTTATATCTCTTCCACGCCATGCGCAAATATCATaGCAAGGCCTGGCTCTTGCACCATGTCATCCCCCATGTGCTGGT +
Preference number: 1 (lower is better)
Translates to: QSSSLISLPRHAQIS*QGLALAPCHPPCAG
Trigger: ACCAGCACATGGGGGATGACATGGTGCAAGAGCCAGGCCTTGTCATGATATTTGCGCATGGCGTGGAAGAGATATAAGAGAACTCGACTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000547967.5
3UTR GCA 90 bp CTGGAAGGGCTAGGAGGAAATTTTTCCAGAGGGCACAGGCATCGATaGTGGACTGTCATATCCTTCACAGGAAGAGAGGAAGCTCCTCAT +
Preference number: 1 (lower is better)
Translates to: LEGLGGNFSRGHRHR*WTVISFTGREEAPH
Trigger: ATGAGGAGCTTCCTCTCTTCCTGTGAAGGATATGACAGTCCAGCATCGATGCCTGTGCCCTCTGGAAAAATTTCCTCCTAGCCCTTCCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000345093.9
ENST00000615206.4
3UTR GCA 90 bp CAGACCCTGGGAAGCACACAGTTCAGATCACTAGAGAGCTTTGGCTaGTACAGAACAGGAGATAGGAGGGAAGAATGCAGGAGGGTACAT +
Preference number: 1 (lower is better)
Translates to: QTLGSTQFRSLESFG*YRTGDRREECRRVH
Trigger: ATGTACCCTCCTGCATTCTTCCCTCCTATCTCCTGTTCTGTAGCAGCCAAAGCTCTCTAGTGATCTGAACTGTGTGCTTCCCAGGGTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345093.9
ENST00000615206.4
3UTR GCA 90 bp AGGAGGGAAGAATGCAGGAGGGTACATGGGAAAGCAGCTGTGAAGTaGACACTACTCCCAGACATCCTCCTGAAAGAGAAGTTAGCACTA +
Preference number: 1 (lower is better)
Translates to: RREECRRVHGKAAVK*TLLPDILLKEKLAL
Trigger: TAGTGCTAACTTCTCTTTCAGGAGGATGTCTGGGAGTAGTGTGCACTTCACAGCTGCTTTCCCATGTACCCTCCTGCATTCTTCCCTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345093.9
ENST00000615206.4
3UTR CCA 90 bp GAAGGGCTAGGAGGAAATTTTTCCAGAGGGCACAGGCATCGATGCTaGACTGTCATATCCTTCACAGGAAGAGAGGAAGCTCCTCATTTC +
Preference number: 1 (lower is better)
Translates to: EGLGGNFSRGHRHRC*TVISFTGREEAPHF
Trigger: GAAATGAGGAGCTTCCTCTCTTCCTGTGAAGGATATGACAGTCCAGCATCGATGCCTGTGCCCTCTGGAAAAATTTCCTCCTAGCCCTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000345093.9
ENST00000615206.4
3UTR GCA 90 bp ATTTCTAGAGATTTGGCTCCACCCTTACCATTTCTTCAGGATGTCTaGTGCTTAGAGTCAACAGGCCTGACTGCTCTGATTCCCTGGTTT +
Preference number: 1 (lower is better)
Translates to: ISRDLAPPLPFLQDV*CLESTGLTALIPWF
Trigger: AAACCAGGGAATCAGAGCAGTCAGGCCTGTTGACTCTAAGCAGCAGACATCCTGAAGAAATGGTAAGGGTGGAGCCAAATCTCTAGAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
3UTR TCA 90 bp GGACGATTAGAGATTCCTTCCTCTGTCCTGATCCTCCAGGGAAATTaGATCTCTTTGTGCTTTCTGAAAATAACTGGAACCAGGGACCCT +
Preference number: 1 (lower is better)
Translates to: GRLEIPSSVLILQGN*ISLCFLKITGTRDP
Trigger: AGGGTCCCTGGTTCCAGTTATTTTCAGAAAGCACAAAGAGATTCAATTTCCCTGGAGGATCAGGACAGAGGAAGGAATCTCTAATCGTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
3UTR CCA 90 bp TGCATGGTGAAGCTTAGAACCCAGCTATACAGCTCCAAGGAAACTTaGGGAAGGGGGAGTTGCCTTCAAAATGAATACTCTAAATCCAGA +
Preference number: 1 (lower is better)
Translates to: CMVKLRTQLYSSKET*GRGSCLQNEYSKSR
Trigger: TCTGGATTTAGAGTATTCATTTTGAAGGCAACTCCCCCTTCCCCAAGTTTCCTTGGAGCTGTATAGCTGGGTTCTAAGCTTCACCATGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000345093.9
ENST00000615206.4
3UTR TCA 90 bp AGAAATGTAGTAACCAGAGTAAGTATAGCAGCGTTTTCAAATTCCTaGGCACAATGTCCCAGAGCTGGAACCCTACTCCCCTCAAGCTTT +
Preference number: 1 (lower is better)
Translates to: RNVVTRVSIAAFSNS*AQCPRAGTLLPSSF
Trigger: AAAGCTTGAGGGGAGTAGGGTTCCAGCTCTGGGACATTGTGCTCAGGAATTTGAAAACGCTGCTATACTTACTCTGGTTACTACATTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345093.9
ENST00000615206.4
3UTR GCA 90 bp GGTGAGACACGGCACAGCCTGTACTTAGAGATAAAATTTCTGATTTaGATGGTGAAGCTTAGAACCCAGCTATACAGCTCCAAGGAAACT +
Preference number: 1 (lower is better)
Translates to: GETRHSLYLEIKFLI*MVKLRTQLYSSKET
Trigger: AGTTTCCTTGGAGCTGTATAGCTGGGTTCTAAGCTTCACCATGCAAATCAGAAATTTTATCTCTAAGTACAGGCTGTGCCGTGTCTCACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345093.9
ENST00000615206.4
3UTR TCA 90 bp GAAACCTTCTCAAGAAAGGGAGTAATGCTGAAGAATTTAGAGAGTTaGGTAAAAGGTTTATTATTAGTGCAGTCAACACCATGGAACAGC +
Preference number: 1 (lower is better)
Translates to: ETFSRKGVMLKNLES*VKGLLLVQSTPWNS
Trigger: GCTGTTCCATGGTGTTGACTGCACTAATAATAAACCTTTTACTCAACTCTCTAAATTCTTCAGCATTACTCCCTTTCTTGAGAAGGTTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345093.9
ENST00000615206.4
3UTR-3UTR TCA 90 bp GTCTTCTCCAGCTCTGCGATGCGTGTCTGCTGCTGCTGTACCACTGAGCGCAGGACAACATGTTCCGCATaGTCCGAGGTACTGGGCGCA +
Preference number: 2 (lower is better)
Translates to: VFSSSAMRVCCCCTTERRTTCSA*SEVLGA
Trigger: TGCGCCCAGTACCTCGGATCATGCGGAACATGTTGT...CCTGCGCTCAGTGGTACAGCAGCAGCAGACACGCATCGCAGAGCTGGAGAAGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549119.1
3UTR CAA 90 bp AGACCCTGGGGCCAGCTACGCTCGTGGGCATTTTCAATCAGCTCGTaGACAATAGAAGCAGGACAGCCACTCTCCACCAGGGAGCGCTTG +
Preference number: 2 (lower is better)
Translates to: RPWGQLRSWAFSISS*TIEAGQPLSTRERL
Trigger: CAAGCGCTCCCTGGTGGAGAGTGGCTGTCCTGCTTCTATTGTCAACGAGCTGATTGAAAATGCCCACGAGCGTAGCTGGCCCCAGGGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547967.5
3UTR-3UTR CCA 90 bp CAGCCCTGTTCACAGGTCACAGGCCGCTTCGGGTTGTGCTCACAGTCGCTGAGGAACACTACGGTCCACTaGACATGTCTGTTGCTGAGA +
Preference number: 2 (lower is better)
Translates to: QPCSQVTGRFGLCSQSLRNTTVH*TCLLLR
Trigger: TCTCAGCAACAGACATGTCCAGTGGACCGTAGTGTT...CCTCAGCGACTGTGAGCACAACCCGAAGCGGCCTGTGACCTGTGAACAGGGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549119.1
3UTR CAA 90 bp CAGTGGGTGCCTACACCTTTAAGGTGGGCTGAACAGGGATACTGCTaGGCACAGAGGTCCAGTCTTTCCCTAAGGGCCATCAGTGATGGC +
Preference number: 2 (lower is better)
Translates to: QWVPTPLRWAEQGYC*AQRSSLSLRAISDG
Trigger: GCCATCACTGATGGCCCTTAGGGAAAGACTGGACCTCTGTGCCAAGCAGTATCCCTGTTCAGCCCACCTTAAAGGTGTAGGCACCCACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
3UTR CAA 90 bp CAGATGGGCGACCGTCACAACACTACGGTCCACTGGACATGTCTGTaGCTGAGAGAACCACTGGGTGATGCAGGCGTTGCAGAAAGCATG +
Preference number: 2 (lower is better)
Translates to: QMGDRHNTTVHWTCL*LREPLGDAGVAESM
Trigger: CATGCTTTCTGCAACGCCTGCATCACCCAGTGGTTCTCTCAGCAACAGACATGTCCAGTGGACCGTAGTGTTGTGACGGTCGCCCATCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549119.1
3UTR-3UTR TCA 90 bp GAAGCAGGACAGCCACTCTCCACCAGGGAGCGCTTGATTACAGCCTGGAGCACATCCCAGCTGCTGGAGTaGTGGGATTTTCTGATTTCC +
Preference number: 2 (lower is better)
Translates to: EAGQPLSTRERLITAWSTSQLLE*WDFLIS
Trigger: GGAAATCAGAAAATCCCATCACTCCAGCAGCTGGGA...TGTGCTCCAGGCTGTAATCAAGCGCTCCCTGGTGGAGAGTGGCTGTCCTGCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547967.5
3UTR-3UTR GCA 90 bp AGGTCCAGTCTTTCCCTAAGGGCCATCAGTGATGGCCAATTAACGGCCTCACTACCCAAGGCCCTTCAGTaGCAGAAGGGCAGGGAGATG +
Preference number: 2 (lower is better)
Translates to: RSSLSLRAISDGQLTASLPKALQ*QKGREM
Trigger: CATCTCCCTGCCCTTCTGGCACTGAAGGGCCTTGGG...TAGTGAGGCCGTTAATTGGCCATCACTGATGGCCCTTAGGGAAAGACTGGACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
3UTR-3UTR CCA 90 bp AGCCATTACATGGTGGGGAGGAGCCTTTCTATCTCCAACCACACTCCCACCTCCGGGCAGGGAGATGTGTaGCTCAGGTATAAGCCACAG +
Preference number: 2 (lower is better)
Translates to: SHYMVGRSLSISNHTPTSGQGDV*LRYKPQ
Trigger: CTGTGGCTTATACCTGAGCCACACATCTCCCTGCCC...GGAGGTGGGAGTGTGGTTGGAGATAGAAAGGCTCCTCCCCACCATGTAATGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345093.9
ENST00000615206.4
3UTR-3UTR CCA 90 bp AAGGCCTGGCTCTTGCACCATGTCATCCCCCATGTGCTGGTTCTCACAGGCCATACTGCTCTGATTCCCTaGTTTTGGAGGAGAGGGACG +
Preference number: 2 (lower is better)
Translates to: KAWLLHHVIPHVLVLTGHTALIP*FWRRGT
Trigger: CGTCCCTCTCCTCCAAAACCAGGGAATCAGAGCAGT...ATGGCCTGTGAGAACCAGCACATGGGGGATGACATGGTGCAAGAGCCAGGCCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000547967.5
3UTR-3UTR CCA 90 bp TGCCAGGGATGCGCTTGGCCACGTAGTTCTCATAGTAGCGTCGGTTCATCTGTCCGCTTGATTACAGCCTaGAGCACAGCATCAGGAGTC +
Preference number: 2 (lower is better)
Translates to: CQGCAWPRSSHSSVGSSVRLITA*STASGV
Trigger: GACTCCTGATGCTGTGCTCCAGGCTGTAATCAAGCG...GACAGATGAACCGACGCTACTATGAGAACTACGTGGCCAAGCGCATCCCTGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547967.5
3UTR CAA 90 bp TATCTCTTCCACGCCATGCGCAAATATCATGACAAGGCCTGGCTCTaGCACCATGTCATCCCCCATGTGCTGGTTCTCACAGGCCATCAC +
Preference number: 2 (lower is better)
Translates to: YLFHAMRKYHDKAWL*HHVIPHVLVLTGHH
Trigger: GTGATGGCCTGTGAGAACCAGCACATGGGGGATGACATGGTGCAAGAGCCAGGCCTTGTCATGATATTTGCGCATGGCGTGGAAGAGATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000547967.5
3UTR-3UTR GCA 90 bp CGCTCGTGGGCATTTTCAATCAGCTCGTTGACAATAGAAGCAGGACAGCCACTCCCTGGACTTGCACTCTaGCTCCTCTTCTCTGGGTTG +
Preference number: 2 (lower is better)
Translates to: RSWAFSISSLTIEAGQPLPGLAL*LLFSGL
Trigger: CAACCCAGAGAAGAGGAGGCAGAGTGCAAGTCCAGG...GAGTGGCTGTCCTGCTTCTATTGTCAACGAGCTGATTGAAAATGCCCACGAGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547967.5
3UTR-3UTR CCA 90 bp GACGTCTTCTCCAGCTCTGCGATGCGTGTCTGCTGCTGCTGTACCACTGAGCGCTGCTTAATGCAGTTATaGTTGGGCAGCTCATCTTTG +
Preference number: 2 (lower is better)
Translates to: DVFSSSAMRVCCCCTTERCLMQL*LGSSSL
Trigger: CAAAGATGAGCTGCCCAACCATAACTGCATTAAGCA...GCGCTCAGTGGTACAGCAGCAGCAGACACGCATCGCAGAGCTGGAGAAGACGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549119.1
3UTR-3UTR CCA 90 bp TTTCTTCAGGATGTCTGCTGCTTAGAGTCAACAGGCCTGACTGCTCTGATTCCCGCGGGTCACTCTTGCTaGCTGAAGGGAGTTCACCCA +
Preference number: 2 (lower is better)
Translates to: FLQDVCCLESTGLTALIPAGHSC*LKGVHP
Trigger: TGGGTGAACTCCCTTCAGCCAGCAAGAGTGACCCGC...GGGAATCAGAGCAGTCAGGCCTGTTGACTCTAAGCAGCAGACATCCTGAAGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547967.5
3UTR CAA 90 bp ATGAGGTTGTCAAGCCGGACAACGGCACTACAGCCGAACACAGCGTaGTCACAGGCAATCTGCAGCTTTGACAACATGTTCCGCATGATC +
Preference number: 2 (lower is better)
Translates to: MRLSSRTTALQPNTA*SQAICSFDNMFRMI
Trigger: GATCATGCGGAACATGTTGTCAAAGCTGCAGATTGCCTGTGACAACGCTGTGTTCGGCTGTAGTGCCGTTGTCCGGCTTGACAACCTCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549119.1
3UTR-3UTR TCA 90 bp TGCTGTACCACTGAGCGCAGGTGCTTAATGCAGTTATGGTTGGGCAGCTCATCTGGACATGTCTGTTGCTaGGAGAACCACTGGGTGATG +
Preference number: 2 (lower is better)
Translates to: CCTTERRCLMQLWLGSSSGHVCC*ENHWVM
Trigger: CATCACCCAGTGGTTCTCTCAGCAACAGACATGTCC...AGATGAGCTGCCCAACCATAACTGCATTAAGCACCTGCGCTCAGTGGTACAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549119.1
3UTR-3UTR TCA 90 bp AGAGGGACGATTAGAGATTCCTTCCTCTGTCCTGATCCTCCAGGGAAATTGAATCCACCAGGGAGCGCTTaGTTACAGCCTGGAGCACAG +
Preference number: 2 (lower is better)
Translates to: RGTIRDSFLCPDPPGKLNPPGSA*LQPGAQ
Trigger: CTGTGCTCCAGGCTGTAATCAAGCGCTCCCTGGTGG...ATTCAATTTCCCTGGAGGATCAGGACAGAGGAAGGAATCTCTAATCGTCCCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547967.5
3UTR-3UTR GCA 90 bp TTCCAGAGGGCACAGGCATCGATGCTGGACTGTCATATCCTTCACAGGAAGAGAGACTCAGGTCCCAGCTaGTGGAGTGATGGGATTTTC +
Preference number: 2 (lower is better)
Translates to: FQRAQASMLDCHILHRKRDSGPS*WSDGIF
Trigger: GAAAATCCCATCACTCCAGCAGCTGGGACCTGAGTC...TCTCTTCCTGTGAAGGATATGACAGTCCAGCATCGATGCCTGTGCCCTCTGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345093.9
ENST00000615206.4
3UTR-3UTR GCA 90 bp TTGGCACAGAGGTCCAGTCTTTCCCTAAGGGCCATCAGTGATGGCCAATTAACGGACTCAGGTCCCAGCTaGTGGAGTGATGGGATTTTC +
Preference number: 2 (lower is better)
Translates to: LAQRSSLSLRAISDGQLTDSGPS*WSDGIF
Trigger: GAAAATCCCATCACTCCAGCAGCTGGGACCTGAGTC...CGTTAATTGGCCATCACTGATGGCCCTTAGGGAAAGACTGGACCTCTGTGCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
3UTR-3UTR TCA 90 bp GCTCATCTGGAAATTTTCAGTATCCCAACCTGCATACTGGTAGACCCAGTGGGTGTCACTCTTGCTGGCTaGAGGGAGTTCACCCACAGT +
Preference number: 2 (lower is better)
Translates to: AHLEIFSIPTCILVDPVGVTLAG*REFTHS
Trigger: ACTGTGGGTGAACTCCCTTCAGCCAGCAAGAGTGAC...ACCCACTGGGTCTACCAGTATGCAGGTTGGGATACTGAAAATTTCCAGATGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547967.5
3UTR-3UTR GCA 90 bp AGGAGTAGCTTCTTGCTAAACACATCAACCCCCAACAGATTAACCCCTACCCTACCAGCGGGTCACTCTTaGTGGCTGAAGGGAGTTCAC +
Preference number: 2 (lower is better)
Translates to: RSSFLLNTSTPNRLTPTLPAGHS*WLKGVH
Trigger: GTGAACTCCCTTCAGCCAGCAAGAGTGACCCGCTGG...TAGGGTAGGGGTTAATCTGTTGGGGGTTGATGTGTTTAGCAAGAAGCTACTCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000547967.5
3UTR-3UTR CCA 90 bp TCATCTGGAAATTTTCAGTATCCCAACCTGCATACTGGTAGACCCAGTGGGTGCGGGCAGGGAGATGTGTaGCTCAGGTATAAGCCACAG +
Preference number: 2 (lower is better)
Translates to: SSGNFQYPNLHTGRPSGCGQGDV*LRYKPQ
Trigger: CTGTGGCTTATACCTGAGCCACACATCTCCCTGCCC...GCACCCACTGGGTCTACCAGTATGCAGGTTGGGATACTGAAAATTTCCAGATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
3UTR-3UTR CCA 90 bp ACACCTTTAAGGTGGGCTGAACAGGGATACTGCTTGGCACAGAGGTCCAGTCTTCAAAGGGAGGAAATCTaGGTTTCCCACCTGAAAGGC +
Preference number: 2 (lower is better)
Translates to: TPLRWAEQGYCLAQRSSLQREEI*VSHLKG
Trigger: GCCTTTCAGGTGGGAAACCCAGATTTCCTCCCTTTG...AAGACTGGACCTCTGTGCCAAGCAGTATCCCTGTTCAGCCCACCTTAAAGGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
3UTR-3UTR CCA 90 bp GCTCATCTGGAAATTTTCAGTATCCCAACCTGCATACTGGTAGACCCAGTGGGTGAAAATGGATGGAGGTaGGGGCTTTCCCACCCAGAC +
Preference number: 2 (lower is better)
Translates to: AHLEIFSIPTCILVDPVGENGWR*GLSHPD
Trigger: GTCTGGGTGGGAAAGCCCCCACCTCCATCCATTTTC...ACCCACTGGGTCTACCAGTATGCAGGTTGGGATACTGAAAATTTCCAGATGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
3UTR-3UTR CCA 90 bp ACATGGGAAAGCAGCTGTGAAGTGCACACTACTCCCAGACATCCTCCTGAAAGAAAGCAGGAAAATGGATaGAGGTGGGGGCTTTCCCAC +
Preference number: 2 (lower is better)
Translates to: TWESSCEVHTTPRHPPERKQENG*RWGLSH
Trigger: GTGGGAAAGCCCCCACCTCCATCCATTTTCCTGCTT...TCTTTCAGGAGGATGTCTGGGAGTAGTGTGCACTTCACAGCTGCTTTCCCATGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000345093.9
ENST00000615206.4
3UTR-3UTR CCA 90 bp CATCTGGAAATTTTCAGTATCCCAACCTGCATACTGGTAGACCCAGTGGGTGCCACTGCTCTGATTCCCTaGTTTTGGAGGAGAGGGACG +
Preference number: 2 (lower is better)
Translates to: HLEIFSIPTCILVDPVGATALIP*FWRRGT
Trigger: CGTCCCTCTCCTCCAAAACCAGGGAATCAGAGCAGT...GGCACCCACTGGGTCTACCAGTATGCAGGTTGGGATACTGAAAATTTCCAGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
3UTR-3UTR TCA 90 bp GGGGGAAAAGCACTGCTAATGTCACTAGGATACATACATTGCCTCTTATGCTCTTCCCACCTGAAAGGCTaGGCAAACTACCCCAAGGCC +
Preference number: 2 (lower is better)
Translates to: GGKALLMSLGYIHCLLCSSHLKG*ANYPKA
Trigger: GGCCTTGGGGTAGTTTGCTCAGCCTTTCAGGTGGGA...AGAGCATAAGAGGCAATGTATGTATCCTAGTGACATTAGCAGTGCTTTTCCCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000345093.9
ENST00000615206.4
3UTR-3UTR TCA 90 bp CATGATCCAACTACCCAGACCTGCAGCAAGCTAGCCTGGAATAAAATTCTGAGACCTAAGGGCCATCAGTaGTGGCCAATTAACGGCCTC +
Preference number: 2 (lower is better)
Translates to: HDPTTQTCSKLAWNKILRPKGHQ*WPINGL
Trigger: GAGGCCGTTAATTGGCCATCACTGATGGCCCTTAGG...TCTCAGAATTTTATTCCAGGCTAGCTTGCTGCAGGTCTGGGTAGTTGGATCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345093.9
ENST00000615206.4
3UTR-3UTR TCA 90 bp TCAGCCGAGGACTCCCTTGGCTCTTCCTATATTAAAGCCAAAGGTTGTGCTGAATGCCAACAATGTGGCTaGGATAGCCATGATCAGGCC +
Preference number: 2 (lower is better)
Translates to: SAEDSLGSSYIKAKGCAECQQCG*DSHDQA
Trigger: GGCCTGATCATGGCTATCTCAGCCACATTGTTGGCA...TTCAGCACAACCTTTGGCTTTAATATAGGAAGAGCCAAGGGAGTCCTCGGCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345093.9
ENST00000615206.4
3UTR-3UTR GCA 90 bp GCTCATCTGGAAATTTTCAGTATCCCAACCTGCATACTGGTAGACCCAGTGGGTGACTCAGGTCCCAGCTaGTGGAGTGATGGGATTTTC +
Preference number: 2 (lower is better)
Translates to: AHLEIFSIPTCILVDPVGDSGPS*WSDGIF
Trigger: GAAAATCCCATCACTCCAGCAGCTGGGACCTGAGTC...ACCCACTGGGTCTACCAGTATGCAGGTTGGGATACTGAAAATTTCCAGATGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
3UTR-3UTR GCA 90 bp CATCTGGAAATTTTCAGTATCCCAACCTGCATACTGGTAGACCCAGTGGGTGCCGTCAACAGGCCTGACTaGTCTGATTCCCTGGTTTTG +
Preference number: 2 (lower is better)
Translates to: HLEIFSIPTCILVDPVGAVNRPD*SDSLVL
Trigger: CAAAACCAGGGAATCAGAGCAGTCAGGCCTGTTGAC...GGCACCCACTGGGTCTACCAGTATGCAGGTTGGGATACTGAAAATTTCCAGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
3UTR-3UTR GCA 90 bp CTGGAAATTTTCAGTATCCCAACCTGCATACTGGTAGACCCAGTGGGTGCCTACCTTCAGGATGTCTGCTaGTTAGAGTCAACAGGCCTG +
Preference number: 2 (lower is better)
Translates to: LEIFSIPTCILVDPVGAYLQDVC*LESTGL
Trigger: CAGGCCTGTTGACTCTAAGCAGCAGACATCCTGAAG...GTAGGCACCCACTGGGTCTACCAGTATGCAGGTTGGGATACTGAAAATTTCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
3UTR-3UTR GCA 90 bp TCATCTGGAAATTTTCAGTATCCCAACCTGCATACTGGTAGACCCAGTGGGTGCGCTGAACAGGGATACTaGTTGGCACAGAGGTCCAGT +
Preference number: 2 (lower is better)
Translates to: SSGNFQYPNLHTGRPSGCAEQGY*LAQRSS
Trigger: ACTGGACCTCTGTGCCAAGCAGTATCCCTGTTCAGC...GCACCCACTGGGTCTACCAGTATGCAGGTTGGGATACTGAAAATTTCCAGATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
3UTR-3UTR CCA 90 bp AGAGGGACGATTAGAGATTCCTTCCTCTGTCCTGATCCTCCAGGGAAATTGAATGAAAATGGATGGAGGTaGGGGCTTTCCCACCCAGAC +
Preference number: 2 (lower is better)
Translates to: RGTIRDSFLCPDPPGKLNENGWR*GLSHPD
Trigger: GTCTGGGTGGGAAAGCCCCCACCTCCATCCATTTTC...ATTCAATTTCCCTGGAGGATCAGGACAGAGGAAGGAATCTCTAATCGTCCCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
3UTR-3UTR CCA 90 bp AGCACACAGTTCAGATCACTAGAGAGCTTTGGCTGCTACAGAACAGGAGATAGGAAGCAGGAAAATGGATaGAGGTGGGGGCTTTCCCAC +
Preference number: 2 (lower is better)
Translates to: STQFRSLESFGCYRTGDRKQENG*RWGLSH
Trigger: GTGGGAAAGCCCCCACCTCCATCCATTTTCCTGCTT...CCTATCTCCTGTTCTGTAGCAGCCAAAGCTCTCTAGTGATCTGAACTGTGTGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000345093.9
ENST00000615206.4
3UTR-3UTR CCA 90 bp TGGATGGAGGTGGGGGCTTTCCCACCCAGACTGATAATTTATAGACATTTTAGGGGCCAGCTACGCTCGTaGGCATTTTCAATCAGCTCG +
Preference number: 2 (lower is better)
Translates to: WMEVGAFPPRLIIYRHFRGQLRS*AFSISS
Trigger: CGAGCTGATTGAAAATGCCCACGAGCGTAGCTGGCC...CCTAAAATGTCTATAAATTATCAGTCTGGGTGGGAAAGCCCCCACCTCCATCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000547967.5
3UTR CAA 90 bp GACTGTCATATCCTTCACAGGAAGAGAGGAAGCTCCTCATTTCAGTaGGGGTTACAGAGGTTTGGGGCAGATATCGTAAGTTCAGCCGAG +
Preference number: 2 (lower is better)
Translates to: DCHILHRKRGSSSFQ*GLQRFGADIVSSAE
Trigger: CTCGGCTGAACTTACGATATCTGCCCCAAACCTCTGTAACCCCAACTGAAATGAGGAGCTTCCTCTCTTCCTGTGAAGGATATGACAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345093.9
ENST00000615206.4
3UTR-3UTR TCA 90 bp TCATCTGGAAATTTTCAGTATCCCAACCTGCATACTGGTAGACCCAGTGGGTGCTCCCAGCTGCTGGAGTaGTGGGATTTTCTGATTTCC +
Preference number: 2 (lower is better)
Translates to: SSGNFQYPNLHTGRPSGCSQLLE*WDFLIS
Trigger: GGAAATCAGAAAATCCCATCACTCCAGCAGCTGGGA...GCACCCACTGGGTCTACCAGTATGCAGGTTGGGATACTGAAAATTTCCAGATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
3UTR-3UTR TCA 90 bp GGAAAATGGATGGAGGTGGGGGCTTTCCCACCCAGACTGATAATTTATAGACATTCTGGGTTTCCCACCTaGAAGGCTGAGCAAACTACC +
Preference number: 2 (lower is better)
Translates to: GKWMEVGAFPPRLIIYRHSGFPT*KAEQTT
Trigger: GGTAGTTTGCTCAGCCTTTCAGGTGGGAAACCCAGA...ATGTCTATAAATTATCAGTCTGGGTGGGAAAGCCCCCACCTCCATCCATTTTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
3UTR-3UTR TCA 90 bp GCCACAAGAGGCAGTGCCAACCATATTTTAGCAAAAGCTAGGAGTAGCTTCTTGACCTTTAAGGTGGGCTaGACAGGGATACTGCTTGGC +
Preference number: 2 (lower is better)
Translates to: ATRGSANHILAKARSSFLTFKVG*TGILLG
Trigger: GCCAAGCAGTATCCCTGTTCAGCCCACCTTAAAGGT...CAAGAAGCTACTCCTAGCTTTTGCTAAAATATGGTTGGCACTGCCTCTTGTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
3UTR-3UTR TCA 90 bp GCTCATCTGGAAATTTTCAGTATCCCAACCTGCATACTGGTAGACCCAGTGGGTCATGCGCAAATATCATaGCAAGGCCTGGCTCTTGCA +
Preference number: 2 (lower is better)
Translates to: AHLEIFSIPTCILVDPVGHAQIS*QGLALA
Trigger: TGCAAGAGCCAGGCCTTGTCATGATATTTGCGCATG...ACCCACTGGGTCTACCAGTATGCAGGTTGGGATACTGAAAATTTCCAGATGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547967.5
3UTR-3UTR GCA 90 bp AGGAGTAGCTTCTTGCTAAACACATCAACCCCCAACAGATTAACCCCTACCCTAGCTGAACAGGGATACTaGTTGGCACAGAGGTCCAGT +
Preference number: 2 (lower is better)
Translates to: RSSFLLNTSTPNRLTPTLAEQGY*LAQRSS
Trigger: ACTGGACCTCTGTGCCAAGCAGTATCCCTGTTCAGC...TAGGGTAGGGGTTAATCTGTTGGGGGTTGATGTGTTTAGCAAGAAGCTACTCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
3UTR-3UTR GCA 90 bp GCCACAAGAGGCAGTGCCAACCATATTTTAGCAAAAGCTAGGAGTAGCTTCTTGATGTCATCCCCCATGTaGTGGTTCTCACAGGCCATC +
Preference number: 2 (lower is better)
Translates to: ATRGSANHILAKARSSFLMSSPM*WFSQAI
Trigger: GATGGCCTGTGAGAACCAGCACATGGGGGATGACAT...CAAGAAGCTACTCCTAGCTTTTGCTAAAATATGGTTGGCACTGCCTCTTGTGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000547967.5
3UTR-3UTR CCA 90 bp GGGGGAAAAGCACTGCTAATGTCACTAGGATACATACATTGCCTCTTATGCTCTGAAAATGGATGGAGGTaGGGGCTTTCCCACCCAGAC +
Preference number: 2 (lower is better)
Translates to: GGKALLMSLGYIHCLLCSENGWR*GLSHPD
Trigger: GTCTGGGTGGGAAAGCCCCCACCTCCATCCATTTTC...AGAGCATAAGAGGCAATGTATGTATCCTAGTGACATTAGCAGTGCTTTTCCCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000345093.9
ENST00000615206.4
3UTR-3UTR CCA 90 bp TGGATGGAGGTGGGGGCTTTCCCACCCAGACTGATAATTTATAGACATTTTAGGAAGCAGGAAAATGGATaGAGGTGGGGGCTTTCCCAC +
Preference number: 2 (lower is better)
Translates to: WMEVGAFPPRLIIYRHFRKQENG*RWGLSH
Trigger: GTGGGAAAGCCCCCACCTCCATCCATTTTCCTGCTT...CCTAAAATGTCTATAAATTATCAGTCTGGGTGGGAAAGCCCCCACCTCCATCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
3UTR-3UTR GCA 90 bp GGGGGAAAAGCACTGCTAATGTCACTAGGATACATACATTGCCTCTTATGCTCTGACTCAGGTCCCAGCTaGTGGAGTGATGGGATTTTC +
Preference number: 2 (lower is better)
Translates to: GGKALLMSLGYIHCLLCSDSGPS*WSDGIF
Trigger: GAAAATCCCATCACTCCAGCAGCTGGGACCTGAGTC...AGAGCATAAGAGGCAATGTATGTATCCTAGTGACATTAGCAGTGCTTTTCCCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000345093.9
ENST00000615206.4
3UTR-3UTR GCA 90 bp CATGATCCAACTACCCAGACCTGCAGCAAGCTAGCCTGGAATAAAATTCTGAGAGTCAACAGGCCTGACTaGTCTGATTCCCTGGTTTTG +
Preference number: 2 (lower is better)
Translates to: HDPTTQTCSKLAWNKILRVNRPD*SDSLVL
Trigger: CAAAACCAGGGAATCAGAGCAGTCAGGCCTGTTGAC...TCTCAGAATTTTATTCCAGGCTAGCTTGCTGCAGGTCTGGGTAGTTGGATCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345093.9
ENST00000615206.4
3UTR-3UTR GCA 90 bp AGCACACAGTTCAGATCACTAGAGAGCTTTGGCTGCTACAGAACAGGAGATAGGTTCAGTATCCCAACCTaGATACTGGTAGACCCAGTG +
Preference number: 2 (lower is better)
Translates to: STQFRSLESFGCYRTGDRFSIPT*ILVDPV
Trigger: CACTGGGTCTACCAGTATGCAGGTTGGGATACTGAA...CCTATCTCCTGTTCTGTAGCAGCCAAAGCTCTCTAGTGATCTGAACTGTGTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345093.9
ENST00000615206.4
3UTR-3UTR GCA 90 bp AGCACACAGTTCAGATCACTAGAGAGCTTTGGCTGCTACAGAACAGGAGATAGGAAAGCAGCTGTGAAGTaGACACTACTCCCAGACATC +
Preference number: 2 (lower is better)
Translates to: STQFRSLESFGCYRTGDRKAAVK*TLLPDI
Trigger: GATGTCTGGGAGTAGTGTGCACTTCACAGCTGCTTT...CCTATCTCCTGTTCTGTAGCAGCCAAAGCTCTCTAGTGATCTGAACTGTGTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345093.9
ENST00000615206.4
3UTR-3UTR GCA 90 bp AAATGGATGGAGGTGGGGGCTTTCCCACCCAGACTGATAATTTATAGACATTTTATCACGACAACAGCCTaGTTGCCAGGGATGCGCTTG +
Preference number: 2 (lower is better)
Translates to: KWMEVGAFPPRLIIYRHFITTTA*LPGMRL
Trigger: CAAGCGCATCCCTGGCAAGCAGGCTGTTGTCGTGAT...AAAATGTCTATAAATTATCAGTCTGGGTGGGAAAGCCCCCACCTCCATCCATTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000547967.5
3UTR-3UTR CCA 90 bp ACACCTTTAAGGTGGGCTGAACAGGGATACTGCTTGGCACAGAGGTCCAGTCTTCATTTTAGGGGAATATaGCAAAGGGAGGAAATCTGG +
Preference number: 2 (lower is better)
Translates to: TPLRWAEQGYCLAQRSSLHFRGI*QREEIW
Trigger: CCAGATTTCCTCCCTTTGCCATATTCCCCTAAAATG...AAGACTGGACCTCTGTGCCAAGCAGTATCCCTGTTCAGCCCACCTTAAAGGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
3UTR-3UTR CCA 90 bp ATAGCCAGTCGAGTTCTCTTATATCTCTTCCACGCCATGCGCAAATATCATGACAAGCAGGAAAATGGATaGAGGTGGGGGCTTTCCCAC +
Preference number: 2 (lower is better)
Translates to: IASRVLLYLFHAMRKYHDKQENG*RWGLSH
Trigger: GTGGGAAAGCCCCCACCTCCATCCATTTTCCTGCTT...GTCATGATATTTGCGCATGGCGTGGAAGAGATATAAGAGAACTCGACTGGCTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000547967.5
3UTR-3UTR CCA 90 bp TCAGCCGAGGACTCCCTTGGCTCTTCCTATATTAAAGCCAAAGGTTGTGCTGAACTGATTCCCTGGTTTTaGAGGAGAGGGACGATTAGA +
Preference number: 2 (lower is better)
Translates to: SAEDSLGSSYIKAKGCAELIPWF*RRGTIR
Trigger: TCTAATCGTCCCTCTCCTCCAAAACCAGGGAATCAG...TTCAGCACAACCTTTGGCTTTAATATAGGAAGAGCCAAGGGAGTCCTCGGCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345093.9
ENST00000615206.4
3UTR-3UTR CCA 90 bp AGCACACAGTTCAGATCACTAGAGAGCTTTGGCTGCTACAGAACAGGAGATAGGGAAGCCATTACATGGTaGGGAGGAGCCTTTCTATCT +
Preference number: 2 (lower is better)
Translates to: STQFRSLESFGCYRTGDREAITW*GGAFLS
Trigger: AGATAGAAAGGCTCCTCCCCACCATGTAATGGCTTC...CCTATCTCCTGTTCTGTAGCAGCCAAAGCTCTCTAGTGATCTGAACTGTGTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345093.9
ENST00000615206.4
3UTR CAA 90 bp GGGACGATTAGAGATTCCTTCCTCTGTCCTGATCCTCCAGGGAAATaGAATCTCTTTGTGCTTTCTGAAAATAACTGGAACCAGGGACCC +
Preference number: 2 (lower is better)
Translates to: GTIRDSFLCPDPPGK*NLFVLSENNWNQGP
Trigger: GGGTCCCTGGTTCCAGTTATTTTCAGAAAGCACAAAGAGATTCAATTTCCCTGGAGGATCAGGACAGAGGAAGGAATCTCTAATCGTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
3UTR-3UTR TCA 90 bp TTTCTTCAGGATGTCTGCTGCTTAGAGTCAACAGGCCTGACTGCTCTGATTCCCATCCTCCAGGGAAATTaGATCTCTTTGTGCTTTCTG +
Preference number: 2 (lower is better)
Translates to: FLQDVCCLESTGLTALIPILQGN*ISLCFL
Trigger: CAGAAAGCACAAAGAGATTCAATTTCCCTGGAGGAT...GGGAATCAGAGCAGTCAGGCCTGTTGACTCTAAGCAGCAGACATCCTGAAGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
3UTR-3UTR TCA 90 bp GGCAGTGCCAACCATATTTTAGCAAAAGCTAGGAGTAGCTTCTTGCTAAACACAACCTTTAAGGTGGGCTaGACAGGGATACTGCTTGGC +
Preference number: 2 (lower is better)
Translates to: GSANHILAKARSSFLLNTTFKVG*TGILLG
Trigger: GCCAAGCAGTATCCCTGTTCAGCCCACCTTAAAGGT...TGTGTTTAGCAAGAAGCTACTCCTAGCTTTTGCTAAAATATGGTTGGCACTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
3UTR-3UTR TCA 90 bp ACAAGAGGCAGTGCCAACCATATTTTAGCAAAAGCTAGGAGTAGCTTCTTGCTAACCTTTAAGGTGGGCTaGACAGGGATACTGCTTGGC +
Preference number: 2 (lower is better)
Translates to: TRGSANHILAKARSSFLLTFKVG*TGILLG
Trigger: GCCAAGCAGTATCCCTGTTCAGCCCACCTTAAAGGT...TAGCAAGAAGCTACTCCTAGCTTTTGCTAAAATATGGTTGGCACTGCCTCTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
3UTR-3UTR TCA 90 bp ATAAACATACCTTGTGTGCATAGAAGCGCAGACTCAGCACAGAAATGCCTTTTTATGGTCTCGAACTCCTaGCCTTGTGATCCACCCACC +
Preference number: 2 (lower is better)
Translates to: INIPCVHRSADSAQKCLFMVSNS*PCDPPT
Trigger: GGTGGGTGGATCACAAGGTCAGGAGTTCGAGACCAT...AAAAAGGCATTTCTGTGCTGAGTCTGCGCTTCTATGCACACAAGGTATGTTTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000345093.9
ENST00000615206.4
3UTR-3UTR GCA 90 bp AGGAGTAGCTTCTTGCTAAACACATCAACCCCCAACAGATTAACCCCTACCCTATTCAGTATCCCAACCTaGATACTGGTAGACCCAGTG +
Preference number: 2 (lower is better)
Translates to: RSSFLLNTSTPNRLTPTLFSIPT*ILVDPV
Trigger: CACTGGGTCTACCAGTATGCAGGTTGGGATACTGAA...TAGGGTAGGGGTTAATCTGTTGGGGGTTGATGTGTTTAGCAAGAAGCTACTCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
3UTR-3UTR GCA 90 bp TGGATGGAGGTGGGGGCTTTCCCACCCAGACTGATAATTTATAGACATTTTAGGTTCAGTATCCCAACCTaGATACTGGTAGACCCAGTG +
Preference number: 2 (lower is better)
Translates to: WMEVGAFPPRLIIYRHFRFSIPT*ILVDPV
Trigger: CACTGGGTCTACCAGTATGCAGGTTGGGATACTGAA...CCTAAAATGTCTATAAATTATCAGTCTGGGTGGGAAAGCCCCCACCTCCATCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
3UTR-3UTR CCA 90 bp CCAAAGAAAATTATCAAAGTAACTAACTACAGTCACAGGGCTAGAGAGGGGTCTGGGCAGGGAGATGTGTaGCTCAGGTATAAGCCACAG +
Preference number: 2 (lower is better)
Translates to: PKKIIKVTNYSHRAREGSGQGDV*LRYKPQ
Trigger: CTGTGGCTTATACCTGAGCCACACATCTCCCTGCCC...AGACCCCTCTCTAGCCCTGTGACTGTAGTTAGTTACTTTGATAATTTTCTTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
3UTR-3UTR CCA 90 bp CTGGAAATTTTCAGTATCCCAACCTGCATACTGGTAGACCCAGTGGGTGCCTACCATTTTAGGGGAATATaGCAAAGGGAGGAAATCTGG +
Preference number: 2 (lower is better)
Translates to: LEIFSIPTCILVDPVGAYHFRGI*QREEIW
Trigger: CCAGATTTCCTCCCTTTGCCATATTCCCCTAAAATG...GTAGGCACCCACTGGGTCTACCAGTATGCAGGTTGGGATACTGAAAATTTCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
3UTR-3UTR CCA 90 bp GCCACAAGAGGCAGTGCCAACCATATTTTAGCAAAAGCTAGGAGTAGCTTCTTGCTGATTCCCTGGTTTTaGAGGAGAGGGACGATTAGA +
Preference number: 2 (lower is better)
Translates to: ATRGSANHILAKARSSFLLIPWF*RRGTIR
Trigger: TCTAATCGTCCCTCTCCTCCAAAACCAGGGAATCAG...CAAGAAGCTACTCCTAGCTTTTGCTAAAATATGGTTGGCACTGCCTCTTGTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
3UTR-3UTR CCA 90 bp GGCAGTGCCAACCATATTTTAGCAAAAGCTAGGAGTAGCTTCTTGCTAAACACAACTGCTCTGATTCCCTaGTTTTGGAGGAGAGGGACG +
Preference number: 2 (lower is better)
Translates to: GSANHILAKARSSFLLNTTALIP*FWRRGT
Trigger: CGTCCCTCTCCTCCAAAACCAGGGAATCAGAGCAGT...TGTGTTTAGCAAGAAGCTACTCCTAGCTTTTGCTAAAATATGGTTGGCACTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
3UTR-3UTR TCA 90 bp AAATGGATGGAGGTGGGGGCTTTCCCACCCAGACTGATAATTTATAGACATTTTTCCCAGCTGCTGGAGTaGTGGGATTTTCTGATTTCC +
Preference number: 2 (lower is better)
Translates to: KWMEVGAFPPRLIIYRHFSQLLE*WDFLIS
Trigger: GGAAATCAGAAAATCCCATCACTCCAGCAGCTGGGA...AAAATGTCTATAAATTATCAGTCTGGGTGGGAAAGCCCCCACCTCCATCCATTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
3UTR-3UTR TCA 90 bp CCAAAGAAAATTATCAAAGTAACTAACTACAGTCACAGGGCTAGAGAGGGGTCTTCTGGGTTTCCCACCTaGAAGGCTGAGCAAACTACC +
Preference number: 2 (lower is better)
Translates to: PKKIIKVTNYSHRAREGSSGFPT*KAEQTT
Trigger: GGTAGTTTGCTCAGCCTTTCAGGTGGGAAACCCAGA...AGACCCCTCTCTAGCCCTGTGACTGTAGTTAGTTACTTTGATAATTTTCTTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
3UTR-3UTR TCA 90 bp AGCACACAGTTCAGATCACTAGAGAGCTTTGGCTGCTACAGAACAGGAGATAGGATCCTCCAGGGAAATTaGATCTCTTTGTGCTTTCTG +
Preference number: 2 (lower is better)
Translates to: STQFRSLESFGCYRTGDRILQGN*ISLCFL
Trigger: CAGAAAGCACAAAGAGATTCAATTTCCCTGGAGGAT...CCTATCTCCTGTTCTGTAGCAGCCAAAGCTCTCTAGTGATCTGAACTGTGTGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345093.9
ENST00000615206.4
3UTR-3UTR TCA 90 bp AAACACATCAACCCCCAACAGATTAACCCCTACCCTAAACCCTGGCATTCCCTAATCCTCCAGGGAAATTaGATCTCTTTGTGCTTTCTG +
Preference number: 2 (lower is better)
Translates to: KHINPQQINPYPKPWHSLILQGN*ISLCFL
Trigger: CAGAAAGCACAAAGAGATTCAATTTCCCTGGAGGAT...TAGGGAATGCCAGGGTTTAGGGTAGGGGTTAATCTGTTGGGGGTTGATGTGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
3UTR-3UTR TCA 90 bp CAATGGCCAAAGAAAATTATCAAAGTAACTAACTACAGTCACAGGGCTAGAGAGCCTAAGGGCCATCAGTaGTGGCCAATTAACGGCCTC +
Preference number: 2 (lower is better)
Translates to: QWPKKIIKVTNYSHRAREPKGHQ*WPINGL
Trigger: GAGGCCGTTAATTGGCCATCACTGATGGCCCTTAGG...CTCTCTAGCCCTGTGACTGTAGTTAGTTACTTTGATAATTTTCTTTGGCCATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
3UTR-3UTR GCA 90 bp GGCAGTGCCAACCATATTTTAGCAAAAGCTAGGAGTAGCTTCTTGCTAAACACAGTCAACAGGCCTGACTaGTCTGATTCCCTGGTTTTG +
Preference number: 2 (lower is better)
Translates to: GSANHILAKARSSFLLNTVNRPD*SDSLVL
Trigger: CAAAACCAGGGAATCAGAGCAGTCAGGCCTGTTGAC...TGTGTTTAGCAAGAAGCTACTCCTAGCTTTTGCTAAAATATGGTTGGCACTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
3UTR-3UTR GCA 90 bp AAATGGATGGAGGTGGGGGCTTTCCCACCCAGACTGATAATTTATAGACATTTTGTCAACAGGCCTGACTaGTCTGATTCCCTGGTTTTG +
Preference number: 2 (lower is better)
Translates to: KWMEVGAFPPRLIIYRHFVNRPD*SDSLVL
Trigger: CAAAACCAGGGAATCAGAGCAGTCAGGCCTGTTGAC...AAAATGTCTATAAATTATCAGTCTGGGTGGGAAAGCCCCCACCTCCATCCATTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
3UTR-3UTR CCA 90 bp AAACTTGTAGGAAAGAAGAGCTCATCTGGAAATTTTCAGTATCCCAACCTGCATGGGCAGGGAGATGTGTaGCTCAGGTATAAGCCACAG +
Preference number: 2 (lower is better)
Translates to: KLVGKKSSSGNFQYPNLHGQGDV*LRYKPQ
Trigger: CTGTGGCTTATACCTGAGCCACACATCTCCCTGCCC...ATGCAGGTTGGGATACTGAAAATTTCCAGATGAGCTCTTCTTTCCTACAAGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
3UTR-3UTR CCA 90 bp AAACACATCAACCCCCAACAGATTAACCCCTACCCTAAACCCTGGCATTCCCTACATTTTAGGGGAATATaGCAAAGGGAGGAAATCTGG +
Preference number: 2 (lower is better)
Translates to: KHINPQQINPYPKPWHSLHFRGI*QREEIW
Trigger: CCAGATTTCCTCCCTTTGCCATATTCCCCTAAAATG...TAGGGAATGCCAGGGTTTAGGGTAGGGGTTAATCTGTTGGGGGTTGATGTGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
3UTR-3UTR CCA 90 bp CAATGGCCAAAGAAAATTATCAAAGTAACTAACTACAGTCACAGGGCTAGAGAGGAAAATGGATGGAGGTaGGGGCTTTCCCACCCAGAC +
Preference number: 2 (lower is better)
Translates to: QWPKKIIKVTNYSHRAREENGWR*GLSHPD
Trigger: GTCTGGGTGGGAAAGCCCCCACCTCCATCCATTTTC...CTCTCTAGCCCTGTGACTGTAGTTAGTTACTTTGATAATTTTCTTTGGCCATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
3UTR-3UTR CCA 90 bp GGGGGAAAAGCACTGCTAATGTCACTAGGATACATACATTGCCTCTTATGCTCTCTGATTCCCTGGTTTTaGAGGAGAGGGACGATTAGA +
Preference number: 2 (lower is better)
Translates to: GGKALLMSLGYIHCLLCSLIPWF*RRGTIR
Trigger: TCTAATCGTCCCTCTCCTCCAAAACCAGGGAATCAG...AGAGCATAAGAGGCAATGTATGTATCCTAGTGACATTAGCAGTGCTTTTCCCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000345093.9
ENST00000615206.4
3UTR-3UTR CCA 90 bp ATAAACATACCTTGTGTGCATAGAAGCGCAGACTCAGCACAGAAATGCCTTTTTACTGCTCTGATTCCCTaGTTTTGGAGGAGAGGGACG +
Preference number: 2 (lower is better)
Translates to: INIPCVHRSADSAQKCLFTALIP*FWRRGT
Trigger: CGTCCCTCTCCTCCAAAACCAGGGAATCAGAGCAGT...AAAAAGGCATTTCTGTGCTGAGTCTGCGCTTCTATGCACACAAGGTATGTTTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000345093.9
ENST00000615206.4
3UTR-3UTR CCA 90 bp GGAAGCTCCTCATTTCAGTTGGGGTTACAGAGGTTTGGGGCAGATATCGTAAGTCCCTACCCTAAACCCTaGCATTCCCTAATTATGAAA +
Preference number: 2 (lower is better)
Translates to: GSSSFQLGLQRFGADIVSPYPKP*HSLIMK
Trigger: TTTCATAATTAGGGAATGCCAGGGTTTAGGGTAGGG...ACTTACGATATCTGCCCCAAACCTCTGTAACCCCAACTGAAATGAGGAGCTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345093.9
ENST00000615206.4
3UTR CAA 90 bp ATCAGTGATGGCCAATTAACGGCCTCACTACTTATTTCTAGAGATTaGGCTCCACCCTTACCATTTCTTCAGGATGTCTGCTGCTTAGAG +
Preference number: 2 (lower is better)
Translates to: ISDGQLTASLLISRD*APPLPFLQDVCCLE
Trigger: CTCTAAGCAGCAGACATCCTGAAGAAATGGTAAGGGTGGAGCCAAATCTCTAGAAATAAGTAGTGAGGCCGTTAATTGGCCATCACTGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
3UTR-3UTR TCA 90 bp CAATGGCCAAAGAAAATTATCAAAGTAACTAACTACAGTCACAGGGCTAGAGAGTCTGGGTTTCCCACCTaGAAGGCTGAGCAAACTACC +
Preference number: 2 (lower is better)
Translates to: QWPKKIIKVTNYSHRARESGFPT*KAEQTT
Trigger: GGTAGTTTGCTCAGCCTTTCAGGTGGGAAACCCAGA...CTCTCTAGCCCTGTGACTGTAGTTAGTTACTTTGATAATTTTCTTTGGCCATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
3UTR-3UTR GCA 90 bp CCAAAGAAAATTATCAAAGTAACTAACTACAGTCACAGGGCTAGAGAGGGGTCTCTTCAGGATGTCTGCTaGTTAGAGTCAACAGGCCTG +
Preference number: 2 (lower is better)
Translates to: PKKIIKVTNYSHRAREGSLQDVC*LESTGL
Trigger: CAGGCCTGTTGACTCTAAGCAGCAGACATCCTGAAG...AGACCCCTCTCTAGCCCTGTGACTGTAGTTAGTTACTTTGATAATTTTCTTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
3UTR-3UTR GCA 90 bp CAATGGCCAAAGAAAATTATCAAAGTAACTAACTACAGTCACAGGGCTAGAGAGGCTGAACAGGGATACTaGTTGGCACAGAGGTCCAGT +
Preference number: 2 (lower is better)
Translates to: QWPKKIIKVTNYSHRAREAEQGY*LAQRSS
Trigger: ACTGGACCTCTGTGCCAAGCAGTATCCCTGTTCAGC...CTCTCTAGCCCTGTGACTGTAGTTAGTTACTTTGATAATTTTCTTTGGCCATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
3UTR-3UTR GCA 90 bp CCAAAGAAAATTATCAAAGTAACTAACTACAGTCACAGGGCTAGAGAGGGGTCTTCACTTTCCTGGACTTaGACTCTGCCTCCTCTTCTC +
Preference number: 2 (lower is better)
Translates to: PKKIIKVTNYSHRAREGSSLSWT*TLPPLL
Trigger: GAGAAGAGGAGGCAGAGTGCAAGTCCAGGAAAGTGA...AGACCCCTCTCTAGCCCTGTGACTGTAGTTAGTTACTTTGATAATTTTCTTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547967.5
3UTR-3UTR CCA 90 bp AGGAGTAGCTTCTTGCTAAACACATCAACCCCCAACAGATTAACCCCTACCCTACATTTTAGGGGAATATaGCAAAGGGAGGAAATCTGG +
Preference number: 2 (lower is better)
Translates to: RSSFLLNTSTPNRLTPTLHFRGI*QREEIW
Trigger: CCAGATTTCCTCCCTTTGCCATATTCCCCTAAAATG...TAGGGTAGGGGTTAATCTGTTGGGGGTTGATGTGTTTAGCAAGAAGCTACTCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
3UTR-3UTR TCA 90 bp CAATGGCCAAAGAAAATTATCAAAGTAACTAACTACAGTCACAGGGCTAGAGAGTCCCAGCTGCTGGAGTaGTGGGATTTTCTGATTTCC +
Preference number: 2 (lower is better)
Translates to: QWPKKIIKVTNYSHRARESQLLE*WDFLIS
Trigger: GGAAATCAGAAAATCCCATCACTCCAGCAGCTGGGA...CTCTCTAGCCCTGTGACTGTAGTTAGTTACTTTGATAATTTTCTTTGGCCATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
3UTR-3UTR TCA 90 bp TGCAAAGGAATTCTAGATTCTAAAGCAAAGTTGCTTGTGGGACAAAGGAAAAAGTCTGGGTTTCCCACCTaGAAGGCTGAGCAAACTACC +
Preference number: 2 (lower is better)
Translates to: CKGILDSKAKLLVGQRKKSGFPT*KAEQTT
Trigger: GGTAGTTTGCTCAGCCTTTCAGGTGGGAAACCCAGA...CTTTTTCCTTTGTCCCACAAGCAACTTTGCTTTAGAATCTAGAATTCCTTTGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000345093.9
ENST00000615206.4
3UTR-3UTR GCA 90 bp CAATGGCCAAAGAAAATTATCAAAGTAACTAACTACAGTCACAGGGCTAGAGAGCTTCAGGATGTCTGCTaGTTAGAGTCAACAGGCCTG +
Preference number: 2 (lower is better)
Translates to: QWPKKIIKVTNYSHRARELQDVC*LESTGL
Trigger: CAGGCCTGTTGACTCTAAGCAGCAGACATCCTGAAG...CTCTCTAGCCCTGTGACTGTAGTTAGTTACTTTGATAATTTTCTTTGGCCATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
3UTR-3UTR GCA 90 bp TTTCTTCAGGATGTCTGCTGCTTAGAGTCAACAGGCCTGACTGCTCTGATTCCCTACTTCGCTTGTTTTTaGTGCATTTTAGAGATCACT +
Preference number: 2 (lower is better)
Translates to: FLQDVCCLESTGLTALIPYFACF*CILEIT
Trigger: AGTGATCTCTAAAATGCAGCAAAAACAAGCGAAGTA...GGGAATCAGAGCAGTCAGGCCTGTTGACTCTAAGCAGCAGACATCCTGAAGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000547967.5
3UTR-3UTR CCA 90 bp ATAAACATACCTTGTGTGCATAGAAGCGCAGACTCAGCACAGAAATGCCTTTTTCACAGGCATCGATGCTaGACTGTCATATCCTTCACA +
Preference number: 2 (lower is better)
Translates to: INIPCVHRSADSAQKCLFHRHRC*TVISFT
Trigger: TGTGAAGGATATGACAGTCCAGCATCGATGCCTGTG...AAAAAGGCATTTCTGTGCTGAGTCTGCGCTTCTATGCACACAAGGTATGTTTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000345093.9
ENST00000615206.4
3UTR-3UTR CCA 90 bp AATGTCACTAGGATACATACATTGCCTCTTATGCTCTATACTGTGACATGCTTAACAATGTCCCAGAGCTaGAACCCTACTCCCCTCAAG +
Preference number: 2 (lower is better)
Translates to: NVTRIHTLPLMLYTVTCLTMSQS*NPTPLK
Trigger: CTTGAGGGGAGTAGGGTTCCAGCTCTGGGACATTGT...TAAGCATGTCACAGTATAGAGCATAAGAGGCAATGTATGTATCCTAGTGACATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345093.9
ENST00000615206.4
3UTR-3UTR TCA 90 bp TGCAAAGGAATTCTAGATTCTAAAGCAAAGTTGCTTGTGGGACAAAGGAAAAAGAAGGACAGGACAGTATaGGCCTTGGTTAAGGCAGGT +
Preference number: 2 (lower is better)
Translates to: CKGILDSKAKLLVGQRKKKDRTV*ALVKAG
Trigger: ACCTGCCTTAACCAAGGCTCATACTGTCCTGTCCTT...CTTTTTCCTTTGTCCCACAAGCAACTTTGCTTTAGAATCTAGAATTCCTTTGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000345093.9
ENST00000615206.4
3UTR-3UTR GCA 90 bp GGCAGTGCCAACCATATTTTAGCAAAAGCTAGGAGTAGCTTCTTGCTAAACACATGCCACAAGAGGCAGTaGCAACCATATTTTAGCAAA +
Preference number: 2 (lower is better)
Translates to: GSANHILAKARSSFLLNTCHKRQ*QPYFSK
Trigger: TTTGCTAAAATATGGTTGGCACTGCCTCTTGTGGCA...TGTGTTTAGCAAGAAGCTACTCCTAGCTTTTGCTAAAATATGGTTGGCACTGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
3UTR-3UTR CCA 90 bp CAATGGCCAAAGAAAATTATCAAAGTAACTAACTACAGTCACAGGGCTAGAGAGCTGATTCCCTGGTTTTaGAGGAGAGGGACGATTAGA +
Preference number: 2 (lower is better)
Translates to: QWPKKIIKVTNYSHRARELIPWF*RRGTIR
Trigger: TCTAATCGTCCCTCTCCTCCAAAACCAGGGAATCAG...CTCTCTAGCCCTGTGACTGTAGTTAGTTACTTTGATAATTTTCTTTGGCCATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
3UTR-3UTR CCA 90 bp GACATGGAATTTAGGATAAAGGCAGACCCTGGGAAGCACACAGTTCAGATCACTTTATTTCTAGAGATTTaGCTCCACCCTTACCATTTC +
Preference number: 2 (lower is better)
Translates to: DMEFRIKADPGKHTVQITLFLEI*LHPYHF
Trigger: GAAATGGTAAGGGTGGAGCCAAATCTCTAGAAATAA...AGTGATCTGAACTGTGTGCTTCCCAGGGTCTGCCTTTATCCTAAATTCCATGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345093.9
ENST00000615206.4
3UTR-3UTR CCA 90 bp AAATGGATGGAGGTGGGGGCTTTCCCACCCAGACTGATAATTTATAGACATTTTCCCTACCCTAAACCCTaGCATTCCCTAATTATGAAA +
Preference number: 2 (lower is better)
Translates to: KWMEVGAFPPRLIIYRHFPYPKP*HSLIMK
Trigger: TTTCATAATTAGGGAATGCCAGGGTTTAGGGTAGGG...AAAATGTCTATAAATTATCAGTCTGGGTGGGAAAGCCCCCACCTCCATCCATTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
3UTR-3UTR CCA 90 bp ATAAACATACCTTGTGTGCATAGAAGCGCAGACTCAGCACAGAAATGCCTTTTTGTGCAGTCAACACCATaGAACAGCACATACAACACA +
Preference number: 2 (lower is better)
Translates to: INIPCVHRSADSAQKCLFVQSTP*NSTYNT
Trigger: TGTGTTGTATGTGCTGTTCCATGGTGTTGACTGCAC...AAAAAGGCATTTCTGTGCTGAGTCTGCGCTTCTATGCACACAAGGTATGTTTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000345093.9
ENST00000615206.4
3UTR CAA 90 bp GAACTGAAAGAGATCTTAGACTTCACTTGTATACTTCGCTTGTTTTaGCTGCATTTTAGAGATCACTTTCCTGGACTTGCACTCTGCCTC +
Preference number: 2 (lower is better)
Translates to: ELKEILDFTCILRLF*LHFRDHFPGLALCL
Trigger: GAGGCAGAGTGCAAGTCCAGGAAAGTGATCTCTAAAATGCAGCAAAAACAAGCGAAGTATACAAGTGAAGTCTAAGATCTCTTTCAGTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547967.5
3UTR-3UTR CCA 90 bp AGGAGTAGCTTCTTGCTAAACACATCAACCCCCAACAGATTAACCCCTACCCTAAAAGAAGAGCTCATCTaGAAATTTTCAGTATCCCAA +
Preference number: 2 (lower is better)
Translates to: RSSFLLNTSTPNRLTPTLKEELI*KFSVSQ
Trigger: TTGGGATACTGAAAATTTCCAGATGAGCTCTTCTTT...TAGGGTAGGGGTTAATCTGTTGGGGGTTGATGTGTTTAGCAAGAAGCTACTCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
3UTR-3UTR CCA 90 bp AATGTCACTAGGATACATACATTGCCTCTTATGCTCTATACTGTGACATGCTTAGGGGTTACAGAGGTTTaGGGCAGATATCGTAAGTTC +
Preference number: 2 (lower is better)
Translates to: NVTRIHTLPLMLYTVTCLGVTEV*GRYRKF
Trigger: GAACTTACGATATCTGCCCCAAACCTCTGTAACCCC...TAAGCATGTCACAGTATAGAGCATAAGAGGCAATGTATGTATCCTAGTGACATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345093.9
ENST00000615206.4
3UTR-3UTR CCA 90 bp TGCAAAGGAATTCTAGATTCTAAAGCAAAGTTGCTTGTGGGACAAAGGAAAAAGCACAGGCATCGATGCTaGACTGTCATATCCTTCACA +
Preference number: 2 (lower is better)
Translates to: CKGILDSKAKLLVGQRKKHRHRC*TVISFT
Trigger: TGTGAAGGATATGACAGTCCAGCATCGATGCCTGTG...CTTTTTCCTTTGTCCCACAAGCAACTTTGCTTTAGAATCTAGAATTCCTTTGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000345093.9
ENST00000615206.4
3UTR CAA 90 bp ACTCCAGAACTGAAAGAGATCTTAGACTTCACTTGTATACTTCGCTaGTTTTTGCTGCATTTTAGAGATCACTTTCCTGGACTTGCACTC +
Preference number: 2 (lower is better)
Translates to: TPELKEILDFTCILR*FLLHFRDHFPGLAL
Trigger: GAGTGCAAGTCCAGGAAAGTGATCTCTAAAATGCAGCAAAAACAAGCGAAGTATACAAGTGAAGTCTAAGATCTCTTTCAGTTCTGGAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000547967.5
3UTR-3UTR CCA 90 bp CCAAAGAAAATTATCAAAGTAACTAACTACAGTCACAGGGCTAGAGAGGGGTCTTTATTTCTAGAGATTTaGCTCCACCCTTACCATTTC +
Preference number: 2 (lower is better)
Translates to: PKKIIKVTNYSHRAREGSLFLEI*LHPYHF
Trigger: GAAATGGTAAGGGTGGAGCCAAATCTCTAGAAATAA...AGACCCCTCTCTAGCCCTGTGACTGTAGTTAGTTACTTTGATAATTTTCTTTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
3UTR TCA 72 bp GCCTACCTGCTCCGCCAGCTGGTGTTTGTGTTCAGCTaGCGTCTTCTCCAGCTCTGCGATGCGTGTCTGCTG +
Preference number: 3 (lower is better)
Translates to: AYLLRQLVFVFS*RLLQLCDACLL
Trigger: CAGCAGACACGCATCGCAGAGCTGGAGAAGACGTCAGCTGAACACAAACACCAGCTGGCGGAGCAGGTAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549119.1
3UTR-3UTR CAA 90 bp ACAGGTCACAGGCCGCTTCGGGTTGTGCTCACAGTCGCTGAGGTGAGACATGAGCAGCCGAACACAGCGTaGTCACAGGCAATCTGCAGC +
Preference number: 3 (lower is better)
Translates to: TGHRPLRVVLTVAEVRHEQPNTA*SQAICS
Trigger: GCTGCAGATTGCCTGTGACAACGCTGTGTTCGGCTG...CTCATGTCTCACCTCAGCGACTGTGAGCACAACCCGAAGCGGCCTGTGACCTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549119.1
3UTR-3UTR CAA 90 bp GGGCCTACCTGCTCCGCCAGCTGGTGTTTGTGTTCAGCTGACGTCTTCTCCAGCCACTGGACATGTCTGTaGCTGAGAGAACCACTGGGT +
Preference number: 3 (lower is better)
Translates to: GPTCSASWCLCSADVFSSHWTCL*LREPLG
Trigger: ACCCAGTGGTTCTCTCAGCAACAGACATGTCCAGTG...GCTGGAGAAGACGTCAGCTGAACACAAACACCAGCTGGCGGAGCAGGTAGGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549119.1
3UTR TCA 72 bp CCCCTCAAGCTTTCCACCCCAATCCCAGTGGAGCCATaGTCCAACTACCCAGACCTGCAGCAAGCTAGCCTG +
Preference number: 3 (lower is better)
Translates to: PLKLSTPIPVEP*SNYPDLQQASL
Trigger: CAGGCTAGCTTGCTGCAGGTCTGGGTAGTTGGATCATGGCTCCACTGGGATTGGGGTGGAAAGCTTGAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345093.9
ENST00000615206.4
3UTR TCA 72 bp ACAGGCCGCTTCGGGTTGTGCTCACAGTCGCTGAGGTaGGACATGAGGTTGTCAAGCCGGACAACGGCACTA +
Preference number: 3 (lower is better)
Translates to: TGRFGLCSQSLR*DMRLSSRTTAL
Trigger: TAGTGCCGTTGTCCGGCTTGACAACCTCATGTCTCACCTCAGCGACTGTGAGCACAACCCGAAGCGGCCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549119.1
3UTR GCA 72 bp ACAAGGCCTGGCTCTTGCACCATGTCATCCCCCATGTaGTGGTTCTCACAGGCCATCACGACAACAGCCTGC +
Preference number: 3 (lower is better)
Translates to: TRPGSCTMSSPM*WFSQAITTTAC
Trigger: GCAGGCTGTTGTCGTGATGGCCTGTGAGAACCAGCACATGGGGGATGACATGGTGCAAGAGCCAGGCCTTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000547967.5
3UTR CCA 72 bp AGGCCTGGCTCTTGCACCATGTCATCCCCCATGTGCTaGTTCTCACAGGCCATCACGACAACAGCCTGCTTG +
Preference number: 3 (lower is better)
Translates to: RPGSCTMSSPMC*FSQAITTTACL
Trigger: CAAGCAGGCTGTTGTCGTGATGGCCTGTGAGAACCAGCACATGGGGGATGACATGGTGCAAGAGCCAGGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000547967.5
3UTR TCA 72 bp CACAGGCAATCTGCAGCTTTGACAACATGTTCCGCATaGTCCGAGGTACTGGGCGCAGATGGGCGACCGTCA +
Preference number: 3 (lower is better)
Translates to: HRQSAALTTCSA*SEVLGADGRPS
Trigger: TGACGGTCGCCCATCTGCGCCCAGTACCTCGGATCATGCGGAACATGTTGTCAAAGCTGCAGATTGCCTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549119.1
3UTR TCA 72 bp CAGCTCTGCGATGCGTGTCTGCTGCTGCTGTACCACTaGGCGCAGGTGCTTAATGCAGTTATGGTTGGGCAG +
Preference number: 3 (lower is better)
Translates to: QLCDACLLLLYH*AQVLNAVMVGQ
Trigger: CTGCCCAACCATAACTGCATTAAGCACCTGCGCTCAGTGGTACAGCAGCAGCAGACACGCATCGCAGAGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549119.1
3UTR GCA 72 bp TCAGCTGACGTCTTCTCCAGCTCTGCGATGCGTGTCTaGTGCTGCTGTACCACTGAGCGCAGGTGCTTAATG +
Preference number: 3 (lower is better)
Translates to: SADVFSSSAMRV*CCCTTERRCLM
Trigger: CATTAAGCACCTGCGCTCAGTGGTACAGCAGCAGCAGACACGCATCGCAGAGCTGGAGAAGACGTCAGCTGA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549119.1
3UTR CCA 72 bp GCGCAGATGGGCGACCGTCACAACACTACGGTCCACTaGACATGTCTGTTGCTGAGAGAACCACTGGGTGAT +
Preference number: 3 (lower is better)
Translates to: AQMGDRHNTTVH*TCLLLREPLGD
Trigger: ATCACCCAGTGGTTCTCTCAGCAACAGACATGTCCAGTGGACCGTAGTGTTGTGACGGTCGCCCATCTGCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549119.1
3UTR CCA 72 bp AACATGTTCCGCATGATCCGAGGTACTGGGCGCAGATaGGCGACCGTCACAACACTACGGTCCACTGGACAT +
Preference number: 3 (lower is better)
Translates to: NMFRMIRGTGRR*ATVTTLRSTGH
Trigger: ATGTCCAGTGGACCGTAGTGTTGTGACGGTCGCCCATCTGCGCCCAGTACCTCGGATCATGCGGAACATGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549119.1
3UTR CCA 72 bp CGGTTCATCTGTCTAGTCTCTAGTGTGGCCAGACCCTaGGGCCAGCTACGCTCGTGGGCATTTTCAATCAGC +
Preference number: 3 (lower is better)
Translates to: RFICLVSSVARP*GQLRSWAFSIS
Trigger: GCTGATTGAAAATGCCCACGAGCGTAGCTGGCCCCAGGGTCTGGCCACACTAGAGACTAGACAGATGAACCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547967.5
3UTR TCA 72 bp GTAGACCCAGTGGGTGCCTACACCTTTAAGGTGGGCTaGACAGGGATACTGCTTGGCACAGAGGTCCAGTCT +
Preference number: 3 (lower is better)
Translates to: VDPVGAYTFKVG*TGILLGTEVQS
Trigger: AGACTGGACCTCTGTGCCAAGCAGTATCCCTGTTCAGCCCACCTTAAAGGTGTAGGCACCCACTGGGTCTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
3UTR TCA 72 bp GCCGAACACAGCGTTGTCACAGGCAATCTGCAGCTTTaGCAACATGTTCCGCATGATCCGAGGTACTGGGCG +
Preference number: 3 (lower is better)
Translates to: AEHSVVTGNLQL*QHVPHDPRYWA
Trigger: CGCCCAGTACCTCGGATCATGCGGAACATGTTGTCAAAGCTGCAGATTGCCTGTGACAACGCTGTGTTCGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549119.1
3UTR GCA 72 bp GTGCCTACACCTTTAAGGTGGGCTGAACAGGGATACTaGTTGGCACAGAGGTCCAGTCTTTCCCTAAGGGCC +
Preference number: 3 (lower is better)
Translates to: VPTPLRWAEQGY*LAQRSSLSLRA
Trigger: GGCCCTTAGGGAAAGACTGGACCTCTGTGCCAAGCAGTATCCCTGTTCAGCCCACCTTAAAGGTGTAGGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
3UTR GCA 72 bp GACGTCTTCTCCAGCTCTGCGATGCGTGTCTGCTGCTaGTGTACCACTGAGCGCAGGTGCTTAATGCAGTTA +
Preference number: 3 (lower is better)
Translates to: DVFSSSAMRVCC*CTTERRCLMQL
Trigger: TAACTGCATTAAGCACCTGCGCTCAGTGGTACAGCAGCAGCAGACACGCATCGCAGAGCTGGAGAAGACGTC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549119.1
3UTR-3UTR CAA 90 bp TCATCTGGAAATTTTCAGTATCCCAACCTGCATACTGGTAGACCCAGTGGGTGCACGACAACAGCCTGCTaGCCAGGGATGCGCTTGGCC +
Preference number: 3 (lower is better)
Translates to: SSGNFQYPNLHTGRPSGCTTTAC*PGMRLA
Trigger: GGCCAAGCGCATCCCTGGCAAGCAGGCTGTTGTCGT...GCACCCACTGGGTCTACCAGTATGCAGGTTGGGATACTGAAAATTTCCAGATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547967.5
3UTR TCA 72 bp TTCCTGGCTCCATCTGAGGGTAAGGACAGGACAGTATaGGCCTTGGTTAAGGCAGGTAGGGGAAAGGGGAGT +
Preference number: 3 (lower is better)
Translates to: FLAPSEGKDRTV*ALVKAGRGKGS
Trigger: ACTCCCCTTTCCCCTACCTGCCTTAACCAAGGCTCATACTGTCCTGTCCTTACCCTCAGATGGAGCCAGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345093.9
ENST00000615206.4
3UTR TCA 72 bp GAGATCATCCCTCCCCAGCGGGTCACTCTTGCTGGCTaGAGGGAGTTCACCCACAGTTTACTCTATGAACTG +
Preference number: 3 (lower is better)
Translates to: EIIPPQRVTLAG*REFTHSLLYEL
Trigger: CAGTTCATAGAGTAAACTGTGGGTGAACTCCCTTCAGCCAGCAAGAGTGACCCGCTGGGGAGGGATGATCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547967.5
3UTR CCA 72 bp TGCTGTACCACTGAGCGCAGGTGCTTAATGCAGTTATaGTTGGGCAGCTCATCTTTGGGCATCTCCAGGCCA +
Preference number: 3 (lower is better)
Translates to: CCTTERRCLMQL*LGSSSLGISRP
Trigger: TGGCCTGGAGATGCCCAAAGATGAGCTGCCCAACCATAACTGCATTAAGCACCTGCGCTCAGTGGTACAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549119.1
3UTR CCA 72 bp TCTAGTGTGGCCAGACCCTGGGGCCAGCTACGCTCGTaGGCATTTTCAATCAGCTCGTTGACAATAGAAGCA +
Preference number: 3 (lower is better)
Translates to: SSVARPWGQLRS*AFSISSLTIEA
Trigger: TGCTTCTATTGTCAACGAGCTGATTGAAAATGCCCACGAGCGTAGCTGGCCCCAGGGTCTGGCCACACTAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547967.5
3UTR CCA 72 bp CTCTTCCACGCCATGCGCAAATATCATGACAAGGCCTaGCTCTTGCACCATGTCATCCCCCATGTGCTGGTT +
Preference number: 3 (lower is better)
Translates to: LFHAMRKYHDKA*LLHHVIPHVLV
Trigger: AACCAGCACATGGGGGATGACATGGTGCAAGAGCCAGGCCTTGTCATGATATTTGCGCATGGCGTGGAAGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000547967.5
3UTR TCA 72 bp GTCACAACACTACGGTCCACTGGACATGTCTGTTGCTaGGAGAACCACTGGGTGATGCAGGCGTTGCAGAAA +
Preference number: 3 (lower is better)
Translates to: VTTLRSTGHVCC*ENHWVMQALQK
Trigger: TTTCTGCAACGCCTGCATCACCCAGTGGTTCTCTCAGCAACAGACATGTCCAGTGGACCGTAGTGTTGTGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549119.1
3UTR GCA 72 bp GCACTACAGCCGAACACAGCGTTGTCACAGGCAATCTaGAGCTTTGACAACATGTTCCGCATGATCCGAGGT +
Preference number: 3 (lower is better)
Translates to: ALQPNTALSQAI*SFDNMFRMIRG
Trigger: ACCTCGGATCATGCGGAACATGTTGTCAAAGCTGCAGATTGCCTGTGACAACGCTGTGTTCGGCTGTAGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549119.1
3UTR GCA 72 bp ATGCGTGTCTGCTGCTGCTGTACCACTGAGCGCAGGTaGTTAATGCAGTTATGGTTGGGCAGCTCATCTTTG +
Preference number: 3 (lower is better)
Translates to: MRVCCCCTTERR*LMQLWLGSSSL
Trigger: CAAAGATGAGCTGCCCAACCATAACTGCATTAAGCACCTGCGCTCAGTGGTACAGCAGCAGCAGACACGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549119.1
3UTR TCA 72 bp GAATATGGCAAAGGGAGGAAATCTGGGTTTCCCACCTaGAAGGCTGAGCAAACTACCCCAAGGCCCTTCAGT +
Preference number: 3 (lower is better)
Translates to: EYGKGRKSGFPT*KAEQTTPRPFS
Trigger: ACTGAAGGGCCTTGGGGTAGTTTGCTCAGCCTTTCAGGTGGGAAACCCAGATTTCCTCCCTTTGCCATATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
3UTR GCA 72 bp GAATGCAGGAGGGTACATGGGAAAGCAGCTGTGAAGTaGACACTACTCCCAGACATCCTCCTGAAAGAGAAG +
Preference number: 3 (lower is better)
Translates to: ECRRVHGKAAVK*TLLPDILLKEK
Trigger: CTTCTCTTTCAGGAGGATGTCTGGGAGTAGTGTGCACTTCACAGCTGCTTTCCCATGTACCCTCCTGCATTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345093.9
ENST00000615206.4
3UTR CCA 72 bp AGGAAGCTCCTCATTTCAGTTGGGGTTACAGAGGTTTaGGGCAGATATCGTAAGTTCAGCCGAGGACTCCCT +
Preference number: 3 (lower is better)
Translates to: RKLLISVGVTEV*GRYRKFSRGLP
Trigger: AGGGAGTCCTCGGCTGAACTTACGATATCTGCCCCAAACCTCTGTAACCCCAACTGAAATGAGGAGCTTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345093.9
ENST00000615206.4
3UTR-3UTR CAA 90 bp ATAGCCAGTCGAGTTCTCTTATATCTCTTCCACGCCATGCGCAAATATCATGACTCCACCAGGGAGCGCTaGATTACAGCCTGGAGCACA +
Preference number: 3 (lower is better)
Translates to: IASRVLLYLFHAMRKYHDSTRER*ITAWST
Trigger: TGTGCTCCAGGCTGTAATCAAGCGCTCCCTGGTGGA...GTCATGATATTTGCGCATGGCGTGGAAGAGATATAAGAGAACTCGACTGGCTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547967.5
3UTR TCA 72 bp TCTCTTATATCTCTTCCACGCCATGCGCAAATATCATaGCAAGGCCTGGCTCTTGCACCATGTCATCCCCCA +
Preference number: 3 (lower is better)
Translates to: SLISLPRHAQIS*QGLALAPCHPP
Trigger: TGGGGGATGACATGGTGCAAGAGCCAGGCCTTGTCATGATATTTGCGCATGGCGTGGAAGAGATATAAGAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000547967.5
3UTR GCA 72 bp GGAAGCACACAGTTCAGATCACTAGAGAGCTTTGGCTaGTACAGAACAGGAGATAGGAGGGAAGAATGCAGG +
Preference number: 3 (lower is better)
Translates to: GSTQFRSLESFG*YRTGDRREECR
Trigger: CCTGCATTCTTCCCTCCTATCTCCTGTTCTGTAGCAGCCAAAGCTCTCTAGTGATCTGAACTGTGTGCTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345093.9
ENST00000615206.4
3UTR CCA 72 bp GGAGGAAATTTTTCCAGAGGGCACAGGCATCGATGCTaGACTGTCATATCCTTCACAGGAAGAGAGGAAGCT +
Preference number: 3 (lower is better)
Translates to: GGNFSRGHRHRC*TVISFTGREEA
Trigger: AGCTTCCTCTCTTCCTGTGAAGGATATGACAGTCCAGCATCGATGCCTGTGCCCTCTGGAAAAATTTCCTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000345093.9
ENST00000615206.4
3UTR-3UTR CAA 90 bp ACCATGTCATCCCCCATGTGCTGGTTCTCACAGGCCATCACGACAACAGCCTGCATACTTCGCTTGTTTTaGCTGCATTTTAGAGATCAC +
Preference number: 3 (lower is better)
Translates to: TMSSPMCWFSQAITTTACILRLF*LHFRDH
Trigger: GTGATCTCTAAAATGCAGCAAAAACAAGCGAAGTAT...GCAGGCTGTTGTCGTGATGGCCTGTGAGAACCAGCACATGGGGGATGACATGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000547967.5
3UTR TCA 72 bp GTAACCAGAGTAAGTATAGCAGCGTTTTCAAATTCCTaGGCACAATGTCCCAGAGCTGGAACCCTACTCCCC +
Preference number: 3 (lower is better)
Translates to: VTRVSIAAFSNS*AQCPRAGTLLP
Trigger: GGGGAGTAGGGTTCCAGCTCTGGGACATTGTGCTCAGGAATTTGAAAACGCTGCTATACTTACTCTGGTTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345093.9
ENST00000615206.4
3UTR GCA 72 bp GATTTGGCTCCACCCTTACCATTTCTTCAGGATGTCTaGTGCTTAGAGTCAACAGGCCTGACTGCTCTGATT +
Preference number: 3 (lower is better)
Translates to: DLAPPLPFLQDV*CLESTGLTALI
Trigger: AATCAGAGCAGTCAGGCCTGTTGACTCTAAGCAGCAGACATCCTGAAGAAATGGTAAGGGTGGAGCCAAATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
3UTR GCA 72 bp GGGCTAGAGAGGGGTCTATGGAACAATTATGGCCTGTaGCACAAGAGGCAGTGCCAACCATATTTTAGCAAA +
Preference number: 3 (lower is better)
Translates to: GLERGLWNNYGL*HKRQCQPYFSK
Trigger: TTTGCTAAAATATGGTTGGCACTGCCTCTTGTGGCACAGGCCATAATTGTTCCATAGACCCCTCTCTAGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
3UTR GCA 72 bp CTAGGAGGAAATTTTTCCAGAGGGCACAGGCATCGATaGTGGACTGTCATATCCTTCACAGGAAGAGAGGAA +
Preference number: 3 (lower is better)
Translates to: LGGNFSRGHRHR*WTVISFTGREE
Trigger: TTCCTCTCTTCCTGTGAAGGATATGACAGTCCAGCATCGATGCCTGTGCCCTCTGGAAAAATTTCCTCCTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000345093.9
ENST00000615206.4
3UTR-3UTR CAA 90 bp GGGAAGCACACAGTTCAGATCACTAGAGAGCTTTGGCTGCTACAGAACAGGAGAGATCCTCCAGGGAAATaGAATCTCTTTGTGCTTTCT +
Preference number: 3 (lower is better)
Translates to: GKHTVQITRELWLLQNRRDPPGK*NLFVLS
Trigger: AGAAAGCACAAAGAGATTCAATTTCCCTGGAGGATC...TCTCCTGTTCTGTAGCAGCCAAAGCTCTCTAGTGATCTGAACTGTGTGCTTCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345093.9
ENST00000615206.4
3UTR-3UTR CAA 90 bp ACAAGAGGCAGTGCCAACCATATTTTAGCAAAAGCTAGGAGTAGCTTCTTGCTAGAACAGGGATACTGCTaGGCACAGAGGTCCAGTCTT +
Preference number: 3 (lower is better)
Translates to: TRGSANHILAKARSSFLLEQGYC*AQRSSL
Trigger: AAGACTGGACCTCTGTGCCAAGCAGTATCCCTGTTC...TAGCAAGAAGCTACTCCTAGCTTTTGCTAAAATATGGTTGGCACTGCCTCTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
3UTR GCA 72 bp AGAAGAGCTCATCTGGAAATTTTCAGTATCCCAACCTaGATACTGGTAGACCCAGTGGGTGCCTACACCTTT +
Preference number: 3 (lower is better)
Translates to: RRAHLEIFSIPT*ILVDPVGAYTF
Trigger: AAAGGTGTAGGCACCCACTGGGTCTACCAGTATGCAGGTTGGGATACTGAAAATTTCCAGATGAGCTCTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
3UTR CCA 72 bp CATGATCCAACTACCCAGACCTGCAGCAAGCTAGCCTaGAATAAAATTCTGAGAGGAAGCCATTACATGGTG +
Preference number: 3 (lower is better)
Translates to: HDPTTQTCSKLA*NKILRGSHYMV
Trigger: CACCATGTAATGGCTTCCTCTCAGAATTTTATTCCAGGCTAGCTTGCTGCAGGTCTGGGTAGTTGGATCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345093.9
ENST00000615206.4
3UTR CCA 72 bp TCCCTCCTCACATTTACGTTCTTAGCTAGGAAACACTaGGAGGTAGAGACTTCTCTGCCTGCAAAGGAATTC +
Preference number: 3 (lower is better)
Translates to: SLLTFTFLARKH*EVETSLPAKEF
Trigger: GAATTCCTTTGCAGGCAGAGAAGTCTCTACCTCCCAGTGTTTCCTAGCTAAGAACGTAAATGTGAGGAGGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345093.9
ENST00000615206.4
3UTR-3UTR CAA 90 bp TCAGCCGAGGACTCCCTTGGCTCTTCCTATATTAAAGCCAAAGGTTGTGCTGAAGATCCTCCAGGGAAATaGAATCTCTTTGTGCTTTCT +
Preference number: 3 (lower is better)
Translates to: SAEDSLGSSYIKAKGCAEDPPGK*NLFVLS
Trigger: AGAAAGCACAAAGAGATTCAATTTCCCTGGAGGATC...TTCAGCACAACCTTTGGCTTTAATATAGGAAGAGCCAAGGGAGTCCTCGGCTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345093.9
ENST00000615206.4
3UTR-3UTR CAA 90 bp CCAAAGAAAATTATCAAAGTAACTAACTACAGTCACAGGGCTAGAGAGGGGTCTGAACAGGGATACTGCTaGGCACAGAGGTCCAGTCTT +
Preference number: 3 (lower is better)
Translates to: PKKIIKVTNYSHRAREGSEQGYC*AQRSSL
Trigger: AAGACTGGACCTCTGTGCCAAGCAGTATCCCTGTTC...AGACCCCTCTCTAGCCCTGTGACTGTAGTTAGTTACTTTGATAATTTTCTTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
3UTR-3UTR CAA 90 bp ATTTCTTCAGGATGTCTGCTGCTTAGAGTCAACAGGCCTGACTGCTCTGATTCCTTTTCAATCAGCTCGTaGACAATAGAAGCAGGACAG +
Preference number: 3 (lower is better)
Translates to: ISSGCLLLRVNRPDCSDSFSISS*TIEAGQ
Trigger: CTGTCCTGCTTCTATTGTCAACGAGCTGATTGAAAA...GGAATCAGAGCAGTCAGGCCTGTTGACTCTAAGCAGCAGACATCCTGAAGAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547967.5
3UTR-3UTR CAA 90 bp TCCCTAAGGGCCATCAGTGATGGCCAATTAACGGCCTCACTACTTATTTCTAGAGATCCTCCAGGGAAATaGAATCTCTTTGTGCTTTCT +
Preference number: 3 (lower is better)
Translates to: SLRAISDGQLTASLLISRDPPGK*NLFVLS
Trigger: AGAAAGCACAAAGAGATTCAATTTCCCTGGAGGATC...TCTAGAAATAAGTAGTGAGGCCGTTAATTGGCCATCACTGATGGCCCTTAGGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
3UTR-3UTR CAA 90 bp GGAAGCTCCTCATTTCAGTTGGGGTTACAGAGGTTTGGGGCAGATATCGTAAGTCTTATTTCTAGAGATTaGGCTCCACCCTTACCATTT +
Preference number: 3 (lower is better)
Translates to: GSSSFQLGLQRFGADIVSLISRD*APPLPF
Trigger: AAATGGTAAGGGTGGAGCCAAATCTCTAGAAATAAG...ACTTACGATATCTGCCCCAAACCTCTGTAACCCCAACTGAAATGAGGAGCTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345093.9
ENST00000615206.4
3UTR GCA 72 bp CGGCACAGCCTGTACTTAGAGATAAAATTTCTGATTTaGATGGTGAAGCTTAGAACCCAGCTATACAGCTCC +
Preference number: 3 (lower is better)
Translates to: RHSLYLEIKFLI*MVKLRTQLYSS
Trigger: GGAGCTGTATAGCTGGGTTCTAAGCTTCACCATGCAAATCAGAAATTTTATCTCTAAGTACAGGCTGTGCCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345093.9
ENST00000615206.4
3UTR-3UTR CAA 90 bp CCAAAGAAAATTATCAAAGTAACTAACTACAGTCACAGGGCTAGAGAGGGGTCTGATCCTCCAGGGAAATaGAATCTCTTTGTGCTTTCT +
Preference number: 3 (lower is better)
Translates to: PKKIIKVTNYSHRAREGSDPPGK*NLFVLS
Trigger: AGAAAGCACAAAGAGATTCAATTTCCCTGGAGGATC...AGACCCCTCTCTAGCCCTGTGACTGTAGTTAGTTACTTTGATAATTTTCTTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
CDS-3UTR GCA 90 bp CCGAGGTACTGGGCGCAGATGGGCGACCGTCACAACACTACGGTCCACTGGACAGCGATGCGTGTCTGCTaGTGCTGTACCACTGAGCGC +
Preference number: 4 (lower is better)
Translates to: PRYWAQMGDRHNTTVHWTAMRVC*CCTTER
Trigger: GCGCTCAGTGGTACAGCAGCAGCAGACACGCATCGC...TGTCCAGTGGACCGTAGTGTTGTGACGGTCGCCCATCTGCGCCCAGTACCTCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549119.1
CDS-3UTR GCA 90 bp GCACCATGTCATCCCCCATGTGCTGGTTCTCACAGGCCATCACGACAACAGCCTACAGTACTGCCCTGGTaGCGGGTCCCAGCCTCTCCC +
Preference number: 4 (lower is better)
Translates to: APCHPPCAGSHRPSRQQPTVLPW*RVPASP
Trigger: GGGAGAGGCTGGGACCCGGCACCAGGGCAGTACTGT...AGGCTGTTGTCGTGATGGCCTGTGAGAACCAGCACATGGGGGATGACATGGTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000547967.5
CDS-3UTR GCA 90 bp CATGATCCGAGGTACTGGGCGCAGATGGGCGACCGTCACAACACTACGGTCCACGTCTTGGGGCCTACCTaGTCCGCCAGCTGGTGTTTG +
Preference number: 4 (lower is better)
Translates to: HDPRYWAQMGDRHNTTVHVLGPT*SASWCL
Trigger: CAAACACCAGCTGGCGGAGCAGGTAGGCCCCAAGAC...GTGGACCGTAGTGTTGTGACGGTCGCCCATCTGCGCCCAGTACCTCGGATCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549119.1
CDS-3UTR CCA 90 bp ACCATGTCATCCCCCATGTGCTGGTTCTCACAGGCCATCACGACAACAGCCTGCAGTGTGGCCAGACCCTaGGGCCAGCTACGCTCGTGG +
Preference number: 4 (lower is better)
Translates to: TMSSPMCWFSQAITTTACSVARP*GQLRSW
Trigger: CCACGAGCGTAGCTGGCCCCAGGGTCTGGCCACACT...GCAGGCTGTTGTCGTGATGGCCTGTGAGAACCAGCACATGGGGGATGACATGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000547967.5
CDS-3UTR GCA 90 bp GCCACAGCCCTGTTCACAGGTCACAGGCCGCTTCGGGTTGTGCTCACAGTCGCTTCTCCAGCTCTGCGATaGGTGTCTGCTGCTGCTGTA +
Preference number: 4 (lower is better)
Translates to: ATALFTGHRPLRVVLTVASPALR*VSAAAV
Trigger: TACAGCAGCAGCAGACACGCATCGCAGAGCTGGAGA...AGCGACTGTGAGCACAACCCGAAGCGGCCTGTGACCTGTGAACAGGGCTGTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549119.1
CDS-3UTR GCA 90 bp CATGATCCGAGGTACTGGGCGCAGATGGGCGACCGTCACAACACTACGGTCCACCGTCTTCTCCAGCTCTaGGATGCGTGTCTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: HDPRYWAQMGDRHNTTVHRLLQL*DACLLL
Trigger: CAGCAGCAGACACGCATCGCAGAGCTGGAGAAGACG...GTGGACCGTAGTGTTGTGACGGTCGCCCATCTGCGCCCAGTACCTCGGATCATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549119.1
CDS-3UTR TCA 90 bp GTCTTCTCCAGCTCTGCGATGCGTGTCTGCTGCTGCTGTACCACTGAGCGCAGGAGTATTCCTTCCCAGTaGCAAGCTCCATCGCCCAGG +
Preference number: 4 (lower is better)
Translates to: VFSSSAMRVCCCCTTERRSIPSQ*QAPSPR
Trigger: CCTGGGCGATGGAGCTTGTCACTGGGAAGGAATACT...CCTGCGCTCAGTGGTACAGCAGCAGCAGACACGCATCGCAGAGCTGGAGAAGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549119.1
CDS-3UTR GCA 90 bp TTGGCACAGAGGTCCAGTCTTTCCCTAAGGGCCATCAGTGATGGCCAATTAACGCAGCGGCCACAGTACTaGCCTGGTGCCGGGTCCCAG +
Preference number: 4 (lower is better)
Translates to: LAQRSSLSLRAISDGQLTQRPQY*PGAGSQ
Trigger: CTGGGACCCGGCACCAGGGCAGTACTGTGGCCGCTG...CGTTAATTGGCCATCACTGATGGCCCTTAGGGAAAGACTGGACCTCTGTGCCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
CDS-3UTR GCA 90 bp GCACCATGTCATCCCCCATGTGCTGGTTCTCACAGGCCATCACGACAACAGCCTGCGATGCGTGTCTGCTaGTGCTGTACCACTGAGCGC +
Preference number: 4 (lower is better)
Translates to: APCHPPCAGSHRPSRQQPAMRVC*CCTTER
Trigger: GCGCTCAGTGGTACAGCAGCAGCAGACACGCATCGC...AGGCTGTTGTCGTGATGGCCTGTGAGAACCAGCACATGGGGGATGACATGGTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000547967.5
CDS-3UTR GCA 90 bp CATGATCCGAGGTACTGGGCGCAGATGGGCGACCGTCACAACACTACGGTCCACTCTGCGATGCGTGTCTaGTGCTGCTGTACCACTGAG +
Preference number: 4 (lower is better)
Translates to: HDPRYWAQMGDRHNTTVHSAMRV*CCCTTE
Trigger: CTCAGTGGTACAGCAGCAGCAGACACGCATCGCAGA...GTGGACCGTAGTGTTGTGACGGTCGCCCATCTGCGCCCAGTACCTCGGATCATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549119.1
CDS-3UTR CCA 90 bp GAAGCAGGACAGCCACTCTCCACCAGGGAGCGCTTGATTACAGCCTGGAGCACAGGTACTGGGCGCAGATaGGCGACCGTCACAACACTA +
Preference number: 4 (lower is better)
Translates to: EAGQPLSTRERLITAWSTGTGRR*ATVTTL
Trigger: TAGTGTTGTGACGGTCGCCCATCTGCGCCCAGTACC...TGTGCTCCAGGCTGTAATCAAGCGCTCCCTGGTGGAGAGTGGCTGTCCTGCTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547967.5
CDS-3UTR CCA 90 bp TGGGGCCTACCTGCTCCGCCAGCTGGTGTTTGTGTTCAGCTGACGTCTTCTCCAGGTACTGGGCGCAGATaGGCGACCGTCACAACACTA +
Preference number: 4 (lower is better)
Translates to: WGLPAPPAGVCVQLTSSPGTGRR*ATVTTL
Trigger: TAGTGTTGTGACGGTCGCCCATCTGCGCCCAGTACC...TGGAGAAGACGTCAGCTGAACACAAACACCAGCTGGCGGAGCAGGTAGGCCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549119.1
CDS-3UTR CCA 90 bp CCTACCTGCTCCGCCAGCTGGTGTTTGTGTTCAGCTGACGTCTTCTCCAGCTCTCATGATCCGAGGTACTaGGCGCAGATGGGCGACCGT +
Preference number: 4 (lower is better)
Translates to: PTCSASWCLCSADVFSSSHDPRY*AQMGDR
Trigger: ACGGTCGCCCATCTGCGCCCAGTACCTCGGATCATG...AGAGCTGGAGAAGACGTCAGCTGAACACAAACACCAGCTGGCGGAGCAGGTAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549119.1
CDS-3UTR TCA 90 bp GAAGCAGGACAGCCACTCTCCACCAGGGAGCGCTTGATTACAGCCTGGAGCACAACAACATGTTCCGCATaGTCCGAGGTACTGGGCGCA +
Preference number: 4 (lower is better)
Translates to: EAGQPLSTRERLITAWSTTTCSA*SEVLGA
Trigger: TGCGCCCAGTACCTCGGATCATGCGGAACATGTTGT...TGTGCTCCAGGCTGTAATCAAGCGCTCCCTGGTGGAGAGTGGCTGTCCTGCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547967.5
CDS-3UTR TCA 90 bp AGCCATTACATGGTGGGGAGGAGCCTTTCTATCTCCAACCACACTCCCACCTCCCCACCAGGGAGCGCTTaGTTACAGCCTGGAGCACAG +
Preference number: 4 (lower is better)
Translates to: SHYMVGRSLSISNHTPTSPPGSA*LQPGAQ
Trigger: CTGTGCTCCAGGCTGTAATCAAGCGCTCCCTGGTGG...GGAGGTGGGAGTGTGGTTGGAGATAGAAAGGCTCCTCCCCACCATGTAATGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345093.9
ENST00000615206.4
CDS-3UTR CCA 90 bp ACACCTTTAAGGTGGGCTGAACAGGGATACTGCTTGGCACAGAGGTCCAGTCTTGCCCTGGAAGCGGCCTaGAGTCTCCGCAACCTGACC +
Preference number: 4 (lower is better)
Translates to: TPLRWAEQGYCLAQRSSLALEAA*SLRNLT
Trigger: GGTCAGGTTGCGGAGACTCCAGGCCGCTTCCAGGGC...AAGACTGGACCTCTGTGCCAAGCAGTATCCCTGTTCAGCCCACCTTAAAGGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
CDS-3UTR CCA 90 bp AGGTCCAGTCTTTCCCTAAGGGCCATCAGTGATGGCCAATTAACGGCCTCACTAGCCCTGGAAGCGGCCTaGAGTCTCCGCAACCTGACC +
Preference number: 4 (lower is better)
Translates to: RSSLSLRAISDGQLTASLALEAA*SLRNLT
Trigger: GGTCAGGTTGCGGAGACTCCAGGCCGCTTCCAGGGC...TAGTGAGGCCGTTAATTGGCCATCACTGATGGCCCTTAGGGAAAGACTGGACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
CDS-3UTR CCA 90 bp GAAGCAGGACAGCCACTCTCCACCAGGGAGCGCTTGATTACAGCCTGGAGCACAGGCCAGCTACGCTCGTaGGCATTTTCAATCAGCTCG +
Preference number: 4 (lower is better)
Translates to: EAGQPLSTRERLITAWSTGQLRS*AFSISS
Trigger: CGAGCTGATTGAAAATGCCCACGAGCGTAGCTGGCC...TGTGCTCCAGGCTGTAATCAAGCGCTCCCTGGTGGAGAGTGGCTGTCCTGCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547967.5
CDS-3UTR CCA 90 bp GGTACTGGGCGCAGATGGGCGACCGTCACAACACTACGGTCCACTGGACATGTCCTGGTCTGGCAAGGCTaGCAGAGAAATGACCTGTAC +
Preference number: 4 (lower is better)
Translates to: GTGRRWATVTTLRSTGHVLVWQG*QRNDLY
Trigger: GTACAGGTCATTTCTCTGCCAGCCTTGCCAGACCAG...GACATGTCCAGTGGACCGTAGTGTTGTGACGGTCGCCCATCTGCGCCCAGTACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549119.1
CDS-3UTR GCA 90 bp TCCGAGGTACTGGGCGCAGATGGGCGACCGTCACAACACTACGGTCCACTGGACACCACTGAGCGCAGGTaGTTAATGCAGTTATGGTTG +
Preference number: 4 (lower is better)
Translates to: SEVLGADGRPSQHYGPLDTTERR*LMQLWL
Trigger: CAACCATAACTGCATTAAGCACCTGCGCTCAGTGGT...GTCCAGTGGACCGTAGTGTTGTGACGGTCGCCCATCTGCGCCCAGTACCTCGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549119.1
CDS-3UTR GCA 90 bp AGCCATTACATGGTGGGGAGGAGCCTTTCTATCTCCAACCACACTCCCACCTCCCCAGCGGGTCACTCTTaGTGGCTGAAGGGAGTTCAC +
Preference number: 4 (lower is better)
Translates to: SHYMVGRSLSISNHTPTSPAGHS*WLKGVH
Trigger: GTGAACTCCCTTCAGCCAGCAAGAGTGACCCGCTGG...GGAGGTGGGAGTGTGGTTGGAGATAGAAAGGCTCCTCCCCACCATGTAATGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345093.9
ENST00000615206.4
CDS-3UTR CCA 90 bp ACACCTTTAAGGTGGGCTGAACAGGGATACTGCTTGGCACAGAGGTCCAGTCTTCAGGAGTACTCGCCCTaGAAGCGGCCTGGAGTCTCC +
Preference number: 4 (lower is better)
Translates to: TPLRWAEQGYCLAQRSSLQEYSP*KRPGVS
Trigger: GGAGACTCCAGGCCGCTTCCAGGGCGAGTACTCCTG...AAGACTGGACCTCTGTGCCAAGCAGTATCCCTGTTCAGCCCACCTTAAAGGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
CDS-3UTR CCA 90 bp AGCCATTACATGGTGGGGAGGAGCCTTTCTATCTCCAACCACACTCCCACCTCCGGTACTGGGCGCAGATaGGCGACCGTCACAACACTA +
Preference number: 4 (lower is better)
Translates to: SHYMVGRSLSISNHTPTSGTGRR*ATVTTL
Trigger: TAGTGTTGTGACGGTCGCCCATCTGCGCCCAGTACC...GGAGGTGGGAGTGTGGTTGGAGATAGAAAGGCTCCTCCCCACCATGTAATGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345093.9
ENST00000615206.4
CDS-3UTR CCA 90 bp TCCGAGGTACTGGGCGCAGATGGGCGACCGTCACAACACTACGGTCCACTGGACAGAAATGACCTGTACTaGCTCCTCCAAGACTCCACT +
Preference number: 4 (lower is better)
Translates to: SEVLGADGRPSQHYGPLDRNDLY*LLQDST
Trigger: AGTGGAGTCTTGGAGGAGCCAGTACAGGTCATTTCT...GTCCAGTGGACCGTAGTGTTGTGACGGTCGCCCATCTGCGCCCAGTACCTCGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549119.1
CDS-3UTR TCA 90 bp AAGCCGGACAACGGCACTACAGCCGAACACAGCGTTGTCACAGGCAATCTGCAGCCCATGTCTCATCACTaGAACCCAGGTCCTTCCAAG +
Preference number: 4 (lower is better)
Translates to: KPDNGTTAEHSVVTGNLQPMSHH*NPGPSK
Trigger: CTTGGAAGGACCTGGGTTTCAGTGATGAGACATGGG...CTGCAGATTGCCTGTGACAACGCTGTGTTCGGCTGTAGTGCCGTTGTCCGGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549119.1
CDS-3UTR TCA 90 bp CTACCTGCTCCGCCAGCTGGTGTTTGTGTTCAGCTGACGTCTTCTCCAGCTCTGGGACATGTCTGTTGCTaGGAGAACCACTGGGTGATG +
Preference number: 4 (lower is better)
Translates to: LPAPPAGVCVQLTSSPALGHVCC*ENHWVM
Trigger: CATCACCCAGTGGTTCTCTCAGCAACAGACATGTCC...CAGAGCTGGAGAAGACGTCAGCTGAACACAAACACCAGCTGGCGGAGCAGGTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549119.1
CDS-3UTR TCA 90 bp AGCTGGTGTTTGTGTTCAGCTGACGTCTTCTCCAGCTCTGCGATGCGTGTCTGCACAACATGTTCCGCATaGTCCGAGGTACTGGGCGCA +
Preference number: 4 (lower is better)
Translates to: SWCLCSADVFSSSAMRVCTTCSA*SEVLGA
Trigger: TGCGCCCAGTACCTCGGATCATGCGGAACATGTTGT...GCAGACACGCATCGCAGAGCTGGAGAAGACGTCAGCTGAACACAAACACCAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549119.1
CDS-3UTR TCA 90 bp TGCCAGGGATGCGCTTGGCCACGTAGTTCTCATAGTAGCGTCGGTTCATCTGTCCTGCTGCTGTACCACTaGGCGCAGGTGCTTAATGCA +
Preference number: 4 (lower is better)
Translates to: CQGCAWPRSSHSSVGSSVLLLYH*AQVLNA
Trigger: TGCATTAAGCACCTGCGCTCAGTGGTACAGCAGCAG...GACAGATGAACCGACGCTACTATGAGAACTACGTGGCCAAGCGCATCCCTGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547967.5
CDS-3UTR TCA 90 bp GAGGTGAGACATGAGGTTGTCAAGCCGGACAACGGCACTACAGCCGAACACAGCGTGTTTGTGTTCAGCTaGCGTCTTCTCCAGCTCTGC +
Preference number: 4 (lower is better)
Translates to: EVRHEVVKPDNGTTAEHSVFVFS*RLLQLC
Trigger: GCAGAGCTGGAGAAGACGTCAGCTGAACACAAACAC...GCTGTGTTCGGCTGTAGTGCCGTTGTCCGGCTTGACAACCTCATGTCTCACCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549119.1
CDS-3UTR GCA 90 bp ATTTCTTCAGGATGTCTGCTGCTTAGAGTCAACAGGCCTGACTGCTCTGATTCCACAGTACTGCCCTGGTaGCGGGTCCCAGCCTCTCCC +
Preference number: 4 (lower is better)
Translates to: ISSGCLLLRVNRPDCSDSTVLPW*RVPASP
Trigger: GGGAGAGGCTGGGACCCGGCACCAGGGCAGTACTGT...GGAATCAGAGCAGTCAGGCCTGTTGACTCTAAGCAGCAGACATCCTGAAGAAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
CDS-3UTR GCA 90 bp TTGGCACAGAGGTCCAGTCTTTCCCTAAGGGCCATCAGTGATGGCCAATTAACGCCCAAGGCCCTTCAGTaGCAGAAGGGCAGGGAGATG +
Preference number: 4 (lower is better)
Translates to: LAQRSSLSLRAISDGQLTPKALQ*QKGREM
Trigger: CATCTCCCTGCCCTTCTGGCACTGAAGGGCCTTGGG...CGTTAATTGGCCATCACTGATGGCCCTTAGGGAAAGACTGGACCTCTGTGCCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
CDS-3UTR CCA 90 bp TCATCTGGAAATTTTCAGTATCCCAACCTGCATACTGGTAGACCCAGTGGGTGCGCCACAGTACTGCCCTaGTGCCGGGTCCCAGCCTCT +
Preference number: 4 (lower is better)
Translates to: SSGNFQYPNLHTGRPSGCATVLP*CRVPAS
Trigger: AGAGGCTGGGACCCGGCACCAGGGCAGTACTGTGGC...GCACCCACTGGGTCTACCAGTATGCAGGTTGGGATACTGAAAATTTCCAGATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
CDS-3UTR CCA 90 bp ACCATGTCATCCCCCATGTGCTGGTTCTCACAGGCCATCACGACAACAGCCTGCCGCTTGATTACAGCCTaGAGCACAGCATCAGGAGTC +
Preference number: 4 (lower is better)
Translates to: TMSSPMCWFSQAITTTACRLITA*STASGV
Trigger: GACTCCTGATGCTGTGCTCCAGGCTGTAATCAAGCG...GCAGGCTGTTGTCGTGATGGCCTGTGAGAACCAGCACATGGGGGATGACATGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000547967.5
CDS-3UTR CCA 90 bp AGCCATTACATGGTGGGGAGGAGCCTTTCTATCTCCAACCACACTCCCACCTCCTCATCCCCCATGTGCTaGTTCTCACAGGCCATCACG +
Preference number: 4 (lower is better)
Translates to: SHYMVGRSLSISNHTPTSSSPMC*FSQAIT
Trigger: CGTGATGGCCTGTGAGAACCAGCACATGGGGGATGA...GGAGGTGGGAGTGTGGTTGGAGATAGAAAGGCTCCTCCCCACCATGTAATGGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000345093.9
ENST00000615206.4
CDS-3UTR CCA 90 bp TTTCTTCAGGATGTCTGCTGCTTAGAGTCAACAGGCCTGACTGCTCTGATTCCCAGCCTCCTGAGTAGCTaGGAGGACAGGCGCCTGTCC +
Preference number: 4 (lower is better)
Translates to: FLQDVCCLESTGLTALIPSLLSS*EDRRLS
Trigger: GGACAGGCGCCTGTCCTCCCAGCTACTCAGGAGGCT...GGGAATCAGAGCAGTCAGGCCTGTTGACTCTAAGCAGCAGACATCCTGAAGAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345093.9
ENST00000615206.4
3UTR CAA 72 bp GACCGTCACAACACTACGGTCCACTGGACATGTCTGTaGCTGAGAGAACCACTGGGTGATGCAGGCGTTGCA +
Preference number: 4 (lower is better)
Translates to: DRHNTTVHWTCL*LREPLGDAGVA
Trigger: TGCAACGCCTGCATCACCCAGTGGTTCTCTCAGCAACAGACATGTCCAGTGGACCGTAGTGTTGTGACGGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549119.1
3UTR CAA 72 bp GGCCAGCTACGCTCGTGGGCATTTTCAATCAGCTCGTaGACAATAGAAGCAGGACAGCCACTCTCCACCAGG +
Preference number: 4 (lower is better)
Translates to: GQLRSWAFSISS*TIEAGQPLSTR
Trigger: CCTGGTGGAGAGTGGCTGTCCTGCTTCTATTGTCAACGAGCTGATTGAAAATGCCCACGAGCGTAGCTGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547967.5
CDS-3UTR TCA 90 bp CTACCTGCTCCGCCAGCTGGTGTTTGTGTTCAGCTGACGTCTTCTCCAGCTCTGTGGCTATTCTCCGACTaGGTATTCCTTCCCAGTGAC +
Preference number: 4 (lower is better)
Translates to: LPAPPAGVCVQLTSSPALWLFSD*VFLPSD
Trigger: GTCACTGGGAAGGAATACTCAGTCGGAGAATAGCCA...CAGAGCTGGAGAAGACGTCAGCTGAACACAAACACCAGCTGGCGGAGCAGGTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549119.1
CDS-3UTR TCA 90 bp GGTCACAGGCCGCTTCGGGTTGTGCTCACAGTCGCTGAGGTGAGACATGAGGTTGGCAATCTGCAGCTTTaGCAACATGTTCCGCATGAT +
Preference number: 4 (lower is better)
Translates to: GHRPLRVVLTVAEVRHEVGNLQL*QHVPHD
Trigger: ATCATGCGGAACATGTTGTCAAAGCTGCAGATTGCC...AACCTCATGTCTCACCTCAGCGACTGTGAGCACAACCCGAAGCGGCCTGTGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549119.1
CDS-3UTR TCA 90 bp CTGGAAATTTTCAGTATCCCAACCTGCATACTGGTAGACCCAGTGGGTGCCTACCCACCAGGGAGCGCTTaGTTACAGCCTGGAGCACAG +
Preference number: 4 (lower is better)
Translates to: LEIFSIPTCILVDPVGAYPPGSA*LQPGAQ
Trigger: CTGTGCTCCAGGCTGTAATCAAGCGCTCCCTGGTGG...GTAGGCACCCACTGGGTCTACCAGTATGCAGGTTGGGATACTGAAAATTTCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
CDS-3UTR TCA 90 bp GCGCAGGTGCTTAATGCAGTTATGGTTGGGCAGCTCATCTTTGGGCATCTCCAGAGGCTGGCAGAGAAATaGCCTGTACTGGCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: AQVLNAVMVGQLIFGHLQRLAEK*PVLAPP
Trigger: TGGAGGAGCCAGTACAGGTCATTTCTCTGCCAGCCT...CTGGAGATGCCCAAAGATGAGCTGCCCAACCATAACTGCATTAAGCACCTGCGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549119.1
CDS-3UTR GCA 90 bp ACTGAGCGCAGGTGCTTAATGCAGTTATGGTTGGGCAGCTCATCTTTGGGCATCATGCGTGTCTGCTGCTaGTGTACCACTGAGCGCAGG +
Preference number: 4 (lower is better)
Translates to: TERRCLMQLWLGSSSLGIMRVCC*CTTERR
Trigger: CCTGCGCTCAGTGGTACAGCAGCAGCAGACACGCAT...GATGCCCAAAGATGAGCTGCCCAACCATAACTGCATTAAGCACCTGCGCTCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549119.1
CDS-3UTR GCA 90 bp ACACCTTTAAGGTGGGCTGAACAGGGATACTGCTTGGCACAGAGGTCCAGTCTTCCTGCTTGCCAGGGATaGGCTTGGCCACGTAGTTCT +
Preference number: 4 (lower is better)
Translates to: TPLRWAEQGYCLAQRSSLPACQG*AWPRSS
Trigger: AGAACTACGTGGCCAAGCGCATCCCTGGCAAGCAGG...AAGACTGGACCTCTGTGCCAAGCAGTATCCCTGTTCAGCCCACCTTAAAGGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
CDS-3UTR GCA 90 bp ACATGGGAAAGCAGCTGTGAAGTGCACACTACTCCCAGACATCCTCCTGAAAGACGACAACAGCCTGCTTaGCAGGGATGCGCTTGGCCA +
Preference number: 4 (lower is better)
Translates to: TWESSCEVHTTPRHPPERRQQPA*QGCAWP
Trigger: TGGCCAAGCGCATCCCTGGCAAGCAGGCTGTTGTCG...TCTTTCAGGAGGATGTCTGGGAGTAGTGTGCACTTCACAGCTGCTTTCCCATGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345093.9
ENST00000615206.4
CDS-3UTR CCA 90 bp GGAAAATGGATGGAGGTGGGGGCTTTCCCACCCAGACTGATAATTTATAGACATGCCACAGTACTGCCCTaGTGCCGGGTCCCAGCCTCT +
Preference number: 4 (lower is better)
Translates to: GKWMEVGAFPPRLIIYRHATVLP*CRVPAS
Trigger: AGAGGCTGGGACCCGGCACCAGGGCAGTACTGTGGC...ATGTCTATAAATTATCAGTCTGGGTGGGAAAGCCCCCACCTCCATCCATTTTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
CDS-3UTR CCA 90 bp TGGATGGAGGTGGGGGCTTTCCCACCCAGACTGATAATTTATAGACATTTTAGGGCCACAGTACTGCCCTaGTGCCGGGTCCCAGCCTCT +
Preference number: 4 (lower is better)
Translates to: WMEVGAFPPRLIIYRHFRATVLP*CRVPAS
Trigger: AGAGGCTGGGACCCGGCACCAGGGCAGTACTGTGGC...CCTAAAATGTCTATAAATTATCAGTCTGGGTGGGAAAGCCCCCACCTCCATCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
CDS-3UTR CCA 90 bp AGCACACAGTTCAGATCACTAGAGAGCTTTGGCTGCTACAGAACAGGAGATAGGCAGGAGTACTCGCCCTaGAAGCGGCCTGGAGTCTCC +
Preference number: 4 (lower is better)
Translates to: STQFRSLESFGCYRTGDRQEYSP*KRPGVS
Trigger: GGAGACTCCAGGCCGCTTCCAGGGCGAGTACTCCTG...CCTATCTCCTGTTCTGTAGCAGCCAAAGCTCTCTAGTGATCTGAACTGTGTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000345093.9
CDS-3UTR CCA 90 bp TTCCAGAGGGCACAGGCATCGATGCTGGACTGTCATATCCTTCACAGGAAGAGAGGTCCTTCCAAGTGTTaGGGGGCAGGTTCCCTGTTC +
Preference number: 4 (lower is better)
Translates to: FQRAQASMLDCHILHRKRGPSKC*GAGSLF
Trigger: GAACAGGGAACCTGCCCCCCAACACTTGGAAGGACC...TCTCTTCCTGTGAAGGATATGACAGTCCAGCATCGATGCCTGTGCCCTCTGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000345093.9
ENST00000615206.4
CDS-3UTR CCA 90 bp TGGGGCCTACCTGCTCCGCCAGCTGGTGTTTGTGTTCAGCTGACGTCTTCTCCAAACACTACGGTCCACTaGACATGTCTGTTGCTGAGA +
Preference number: 4 (lower is better)
Translates to: WGLPAPPAGVCVQLTSSPNTTVH*TCLLLR
Trigger: TCTCAGCAACAGACATGTCCAGTGGACCGTAGTGTT...TGGAGAAGACGTCAGCTGAACACAAACACCAGCTGGCGGAGCAGGTAGGCCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549119.1
CDS-3UTR CCA 90 bp AGGTCCAGTCTTTCCCTAAGGGCCATCAGTGATGGCCAATTAACGGCCTCACTAGGTACTGGGCGCAGATaGGCGACCGTCACAACACTA +
Preference number: 4 (lower is better)
Translates to: RSSLSLRAISDGQLTASLGTGRR*ATVTTL
Trigger: TAGTGTTGTGACGGTCGCCCATCTGCGCCCAGTACC...TAGTGAGGCCGTTAATTGGCCATCACTGATGGCCCTTAGGGAAAGACTGGACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
CDS-3UTR CCA 90 bp TGCTGTACCACTGAGCGCAGGTGCTTAATGCAGTTATGGTTGGGCAGCTCATCTTGGGCAGCTCATCTTTaGGCATCTCCAGGCCACAGC +
Preference number: 4 (lower is better)
Translates to: CCTTERRCLMQLWLGSSSWAAHL*ASPGHS
Trigger: GCTGTGGCCTGGAGATGCCCAAAGATGAGCTGCCCA...AGATGAGCTGCCCAACCATAACTGCATTAAGCACCTGCGCTCAGTGGTACAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549119.1
CDS-3UTR CCA 90 bp ACACCTTTAAGGTGGGCTGAACAGGGATACTGCTTGGCACAGAGGTCCAGTCTTGCGGGTCACTCTTGCTaGCTGAAGGGAGTTCACCCA +
Preference number: 4 (lower is better)
Translates to: TPLRWAEQGYCLAQRSSLAGHSC*LKGVHP
Trigger: TGGGTGAACTCCCTTCAGCCAGCAAGAGTGACCCGC...AAGACTGGACCTCTGTGCCAAGCAGTATCCCTGTTCAGCCCACCTTAAAGGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
CDS-3UTR CCA 90 bp AGAGGGACGATTAGAGATTCCTTCCTCTGTCCTGATCCTCCAGGGAAATTGAATAGTGTGGCCAGACCCTaGGGCCAGCTACGCTCGTGG +
Preference number: 4 (lower is better)
Translates to: RGTIRDSFLCPDPPGKLNSVARP*GQLRSW
Trigger: CCACGAGCGTAGCTGGCCCCAGGGTCTGGCCACACT...ATTCAATTTCCCTGGAGGATCAGGACAGAGGAAGGAATCTCTAATCGTCCCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
CDS-3UTR CCA 90 bp TGGATGGAGGTGGGGGCTTTCCCACCCAGACTGATAATTTATAGACATTTTAGGAGTGTGGCCAGACCCTaGGGCCAGCTACGCTCGTGG +
Preference number: 4 (lower is better)
Translates to: WMEVGAFPPRLIIYRHFRSVARP*GQLRSW
Trigger: CCACGAGCGTAGCTGGCCCCAGGGTCTGGCCACACT...CCTAAAATGTCTATAAATTATCAGTCTGGGTGGGAAAGCCCCCACCTCCATCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
CDS-3UTR CCA 90 bp GACATGGAATTTAGGATAAAGGCAGACCCTGGGAAGCACACAGTTCAGATCACTAGTGTGGCCAGACCCTaGGGCCAGCTACGCTCGTGG +
Preference number: 4 (lower is better)
Translates to: DMEFRIKADPGKHTVQITSVARP*GQLRSW
Trigger: CCACGAGCGTAGCTGGCCCCAGGGTCTGGCCACACT...AGTGATCTGAACTGTGTGCTTCCCAGGGTCTGCCTTTATCCTAAATTCCATGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345093.9
ENST00000615206.4
CDS-3UTR CCA 90 bp AGCCATTACATGGTGGGGAGGAGCCTTTCTATCTCCAACCACACTCCCACCTCCACTGCTCTGATTCCCTaGTTTTGGAGGAGAGGGACG +
Preference number: 4 (lower is better)
Translates to: SHYMVGRSLSISNHTPTSTALIP*FWRRGT
Trigger: CGTCCCTCTCCTCCAAAACCAGGGAATCAGAGCAGT...GGAGGTGGGAGTGTGGTTGGAGATAGAAAGGCTCCTCCCCACCATGTAATGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345093.9
ENST00000615206.4
CDS-3UTR CCA 90 bp AGCACACAGTTCAGATCACTAGAGAGCTTTGGCTGCTACAGAACAGGAGATAGGAGCCTCCTGAGTAGCTaGGAGGACAGGCGCCTGTCC +
Preference number: 4 (lower is better)
Translates to: STQFRSLESFGCYRTGDRSLLSS*EDRRLS
Trigger: GGACAGGCGCCTGTCCTCCCAGCTACTCAGGAGGCT...CCTATCTCCTGTTCTGTAGCAGCCAAAGCTCTCTAGTGATCTGAACTGTGTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345093.9
ENST00000615206.4
3UTR CAA 72 bp CCTACACCTTTAAGGTGGGCTGAACAGGGATACTGCTaGGCACAGAGGTCCAGTCTTTCCCTAAGGGCCATC +
Preference number: 4 (lower is better)
Translates to: PTPLRWAEQGYC*AQRSSLSLRAI
Trigger: GATGGCCCTTAGGGAAAGACTGGACCTCTGTGCCAAGCAGTATCCCTGTTCAGCCCACCTTAAAGGTGTAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
3UTR CAA 72 bp AGGTGCTTAATGCAGTTATGGTTGGGCAGCTCATCTTaGGGCATCTCCAGGCCACAGCCCTGTTCACAGGTC +
Preference number: 4 (lower is better)
Translates to: RCLMQLWLGSSS*GISRPQPCSQV
Trigger: GACCTGTGAACAGGGCTGTGGCCTGGAGATGCCCAAAGATGAGCTGCCCAACCATAACTGCATTAAGCACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549119.1
3UTR CAA 72 bp TGTACCACTGAGCGCAGGTGCTTAATGCAGTTATGGTaGGGCAGCTCATCTTTGGGCATCTCCAGGCCACAG +
Preference number: 4 (lower is better)
Translates to: CTTERRCLMQLW*GSSSLGISRPQ
Trigger: CTGTGGCCTGGAGATGCCCAAAGATGAGCTGCCCAACCATAACTGCATTAAGCACCTGCGCTCAGTGGTACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549119.1
CDS-3UTR TCA 90 bp AGGTCCAGTCTTTCCCTAAGGGCCATCAGTGATGGCCAATTAACGGCCTCACTAAGTATTCCTTCCCAGTaGCAAGCTCCATCGCCCAGG +
Preference number: 4 (lower is better)
Translates to: RSSLSLRAISDGQLTASLSIPSQ*QAPSPR
Trigger: CCTGGGCGATGGAGCTTGTCACTGGGAAGGAATACT...TAGTGAGGCCGTTAATTGGCCATCACTGATGGCCCTTAGGGAAAGACTGGACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
CDS-3UTR TCA 90 bp AAGGCCTGGCTCTTGCACCATGTCATCCCCCATGTGCTGGTTCTCACAGGCCATGGCAATCTGCAGCTTTaGCAACATGTTCCGCATGAT +
Preference number: 4 (lower is better)
Translates to: KAWLLHHVIPHVLVLTGHGNLQL*QHVPHD
Trigger: ATCATGCGGAACATGTTGTCAAAGCTGCAGATTGCC...ATGGCCTGTGAGAACCAGCACATGGGGGATGACATGGTGCAAGAGCCAGGCCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000547967.5
CDS-3UTR TCA 90 bp GCAATCTGCAGCTTTGACAACATGTTCCGCATGATCCGAGGTACTGGGCGCAGATCACAGTCGCTGAGGTaGGACATGAGGTTGTCAAGC +
Preference number: 4 (lower is better)
Translates to: AICSFDNMFRMIRGTGRRSQSLR*DMRLSS
Trigger: GCTTGACAACCTCATGTCTCACCTCAGCGACTGTGA...TCTGCGCCCAGTACCTCGGATCATGCGGAACATGTTGTCAAAGCTGCAGATTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549119.1
CDS-3UTR TCA 90 bp TGCTTAATGCAGTTATGGTTGGGCAGCTCATCTTTGGGCATCTCCAGGCCACAGCTGCTGCTGTACCACTaGGCGCAGGTGCTTAATGCA +
Preference number: 4 (lower is better)
Translates to: CLMQLWLGSSSLGISRPQLLLYH*AQVLNA
Trigger: TGCATTAAGCACCTGCGCTCAGTGGTACAGCAGCAG...CTGTGGCCTGGAGATGCCCAAAGATGAGCTGCCCAACCATAACTGCATTAAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549119.1
CDS-3UTR TCA 90 bp ACACCTTTAAGGTGGGCTGAACAGGGATACTGCTTGGCACAGAGGTCCAGTCTTTCTGAAGGTTGGGGTTaGCACTGCGGATTGCACGCA +
Preference number: 4 (lower is better)
Translates to: TPLRWAEQGYCLAQRSSLSEGWG*HCGLHA
Trigger: TGCGTGCAATCCGCAGTGTCAACCCCAACCTTCAGA...AAGACTGGACCTCTGTGCCAAGCAGTATCCCTGTTCAGCCCACCTTAAAGGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
CDS-3UTR TCA 90 bp AGGTCCAGTCTTTCCCTAAGGGCCATCAGTGATGGCCAATTAACGGCCTCACTAGTCTCCTCCAGGTTCTaGAGGTTGGGGTTGACACTG +
Preference number: 4 (lower is better)
Translates to: RSSLSLRAISDGQLTASLVSSRF*RLGLTL
Trigger: CAGTGTCAACCCCAACCTTCAGAACCTGGAGGAGAC...TAGTGAGGCCGTTAATTGGCCATCACTGATGGCCCTTAGGGAAAGACTGGACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
CDS-3UTR TCA 90 bp TTCCAGAGGGCACAGGCATCGATGCTGGACTGTCATATCCTTCACAGGAAGAGAGTCTCCTCCAGGTTCTaGAGGTTGGGGTTGACACTG +
Preference number: 4 (lower is better)
Translates to: FQRAQASMLDCHILHRKRVSSRF*RLGLTL
Trigger: CAGTGTCAACCCCAACCTTCAGAACCTGGAGGAGAC...TCTCTTCCTGTGAAGGATATGACAGTCCAGCATCGATGCCTGTGCCCTCTGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345093.9
ENST00000615206.4
CDS-3UTR TCA 90 bp TTGGCACAGAGGTCCAGTCTTTCCCTAAGGGCCATCAGTGATGGCCAATTAACGGTCACTCTTGCTGGCTaGAGGGAGTTCACCCACTCT +
Preference number: 4 (lower is better)
Translates to: LAQRSSLSLRAISDGQLTVTLAG*REFTHS
Trigger: AGAGTGGGTGAACTCCCTTCAGCCAGCAAGAGTGAC...CGTTAATTGGCCATCACTGATGGCCCTTAGGGAAAGACTGGACCTCTGTGCCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000615206.4
CDS-3UTR TCA 90 bp ACATGGGAAAGCAGCTGTGAAGTGCACACTACTCCCAGACATCCTCCTGAAAGATCCCACCTGAAAGGCTaGGCAAACTACCCCAAGGCC +
Preference number: 4 (lower is better)
Translates to: TWESSCEVHTTPRHPPERSHLKG*ANYPKA
Trigger: GGCCTTGGGGTAGTTTGCTCAGCCTTTCAGGTGGGA...TCTTTCAGGAGGATGTCTGGGAGTAGTGTGCACTTCACAGCTGCTTTCCCATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345093.9
ENST00000615206.4
CDS-3UTR TCA 90 bp AGGTCCAGTCTTTCCCTAAGGGCCATCAGTGATGGCCAATTAACGGCCTCACTACCTAAGGGCCATCAGTaGTGGCCAATTAACGGCCTC +
Preference number: 4 (lower is better)
Translates to: RSSLSLRAISDGQLTASLPKGHQ*WPINGL
Trigger: GAGGCCGTTAATTGGCCATCACTGATGGCCCTTAGG...TAGTGAGGCCGTTAATTGGCCATCACTGATGGCCCTTAGGGAAAGACTGGACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
CDS-3UTR GCA 90 bp TTTCTTCAGGATGTCTGCTGCTTAGAGTCAACAGGCCTGACTGCTCTGATTCCCATGCGTGTCTGCTGCTaGTGTACCACTGAGCGCAGG +
Preference number: 4 (lower is better)
Translates to: FLQDVCCLESTGLTALIPMRVCC*CTTERR
Trigger: CCTGCGCTCAGTGGTACAGCAGCAGCAGACACGCAT...GGGAATCAGAGCAGTCAGGCCTGTTGACTCTAAGCAGCAGACATCCTGAAGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
CDS-3UTR GCA 90 bp TCTGGAAATTTTCAGTATCCCAACCTGCATACTGGTAGACCCAGTGGGTGCCTAGCGATGCGTGTCTGCTaGTGCTGTACCACTGAGCGC +
Preference number: 4 (lower is better)
Translates to: SGNFQYPNLHTGRPSGCLAMRVC*CCTTER
Trigger: GCGCTCAGTGGTACAGCAGCAGCAGACACGCATCGC...TAGGCACCCACTGGGTCTACCAGTATGCAGGTTGGGATACTGAAAATTTCCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
CDS-3UTR GCA 90 bp AGGTCCAGTCTTTCCCTAAGGGCCATCAGTGATGGCCAATTAACGGCCTCACTATCTGCGATGCGTGTCTaGTGCTGCTGTACCACTGAG +
Preference number: 4 (lower is better)
Translates to: RSSLSLRAISDGQLTASLSAMRV*CCCTTE
Trigger: CTCAGTGGTACAGCAGCAGCAGACACGCATCGCAGA...TAGTGAGGCCGTTAATTGGCCATCACTGATGGCCCTTAGGGAAAGACTGGACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
CDS-3UTR GCA 90 bp TTGGCACAGAGGTCCAGTCTTTCCCTAAGGGCCATCAGTGATGGCCAATTAACGTCTCCAGCTCTGCGATaGGTGTCTGCTGCTGCTGTA +
Preference number: 4 (lower is better)
Translates to: LAQRSSLSLRAISDGQLTSPALR*VSAAAV
Trigger: TACAGCAGCAGCAGACACGCATCGCAGAGCTGGAGA...CGTTAATTGGCCATCACTGATGGCCCTTAGGGAAAGACTGGACCTCTGTGCCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
CDS-3UTR GCA 90 bp CTGGAAATTTTCAGTATCCCAACCTGCATACTGGTAGACCCAGTGGGTGCCTACCGTCTTCTCCAGCTCTaGGATGCGTGTCTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: LEIFSIPTCILVDPVGAYRLLQL*DACLLL
Trigger: CAGCAGCAGACACGCATCGCAGAGCTGGAGAAGACG...GTAGGCACCCACTGGGTCTACCAGTATGCAGGTTGGGATACTGAAAATTTCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
CDS-3UTR GCA 90 bp TTTCTTCAGGATGTCTGCTGCTTAGAGTCAACAGGCCTGACTGCTCTGATTCCCCCAGCGGGTCACTCTTaGTGGCTGAAGGGAGTTCAC +
Preference number: 4 (lower is better)
Translates to: FLQDVCCLESTGLTALIPPAGHS*WLKGVH
Trigger: GTGAACTCCCTTCAGCCAGCAAGAGTGACCCGCTGG...GGGAATCAGAGCAGTCAGGCCTGTTGACTCTAAGCAGCAGACATCCTGAAGAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
CDS-3UTR GCA 90 bp CATCTGGAAATTTTCAGTATCCCAACCTGCATACTGGTAGACCCAGTGGGTGCCCCTGCTTGCCAGGGATaGGCTTGGCCACGTAGTTCT +
Preference number: 4 (lower is better)
Translates to: HLEIFSIPTCILVDPVGAPACQG*AWPRSS
Trigger: AGAACTACGTGGCCAAGCGCATCCCTGGCAAGCAGG...GGCACCCACTGGGTCTACCAGTATGCAGGTTGGGATACTGAAAATTTCCAGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
CDS-3UTR GCA 90 bp ACACCTTTAAGGTGGGCTGAACAGGGATACTGCTTGGCACAGAGGTCCAGTCTTAGACGTGAGCCACCGTaGCCGGCCTATGAAGACTTT +
Preference number: 4 (lower is better)
Translates to: TPLRWAEQGYCLAQRSSLRREPP*PAYEDF
Trigger: AAAGTCTTCATAGGCCGGGCACGGTGGCTCACGTCT...AAGACTGGACCTCTGTGCCAAGCAGTATCCCTGTTCAGCCCACCTTAAAGGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345093.9
ENST00000615206.4
CDS-3UTR GCA 90 bp TGCTCCGCCAGCTGGTGTTTGTGTTCAGCTGACGTCTTCTCCAGCTCTGCGATGGCTTCTCCTCATACTTaGCCCAGGATGATACAACTG +
Preference number: 4 (lower is better)
Translates to: CSASWCLCSADVFSSSAMASPHT*PRMIQL
Trigger: CAGTTGTATCATCCTGGGGCAAGTATGAGGAGAAGC...CATCGCAGAGCTGGAGAAGACGTCAGCTGAACACAAACACCAGCTGGCGGAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549119.1
CDS-3UTR GCA 90 bp AGGTCCAGTCTTTCCCTAAGGGCCATCAGTGATGGCCAATTAACGGCCTCACTACCTGGACTTGCACTCTaGCTCCTCTTCTCTGGGTTG +
Preference number: 4 (lower is better)
Translates to: RSSLSLRAISDGQLTASLPGLAL*LLFSGL
Trigger: CAACCCAGAGAAGAGGAGGCAGAGTGCAAGTCCAGG...TAGTGAGGCCGTTAATTGGCCATCACTGATGGCCCTTAGGGAAAGACTGGACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547967.5
CDS-3UTR CCA 90 bp ACAGCGTTGTCACAGGCAATCTGCAGCTTTGACAACATGTTCCGCATGATCCGAGGTCCTTCCAAGTGTTaGGGGGCAGGTTCCCTGTTC +
Preference number: 4 (lower is better)
Translates to: TALSQAICSFDNMFRMIRGPSKC*GAGSLF
Trigger: GAACAGGGAACCTGCCCCCCAACACTTGGAAGGACC...TCGGATCATGCGGAACATGTTGTCAAAGCTGCAGATTGCCTGTGACAACGCTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000549119.1
CDS-3UTR CCA 90 bp CATCTGGAAATTTTCAGTATCCCAACCTGCATACTGGTAGACCCAGTGGGTGCCGGTACTGGGCGCAGATaGGCGACCGTCACAACACTA +
Preference number: 4 (lower is better)
Translates to: HLEIFSIPTCILVDPVGAGTGRR*ATVTTL
Trigger: TAGTGTTGTGACGGTCGCCCATCTGCGCCCAGTACC...GGCACCCACTGGGTCTACCAGTATGCAGGTTGGGATACTGAAAATTTCCAGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
CDS-3UTR CCA 90 bp TCAGCCGAGGACTCCCTTGGCTCTTCCTATATTAAAGCCAAAGGTTGTGCTGAACATGATCCGAGGTACTaGGCGCAGATGGGCGACCGT +
Preference number: 4 (lower is better)
Translates to: SAEDSLGSSYIKAKGCAEHDPRY*AQMGDR
Trigger: ACGGTCGCCCATCTGCGCCCAGTACCTCGGATCATG...TTCAGCACAACCTTTGGCTTTAATATAGGAAGAGCCAAGGGAGTCCTCGGCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345093.9
ENST00000615206.4
CDS-3UTR CCA 90 bp GCTCATCTGGAAATTTTCAGTATCCCAACCTGCATACTGGTAGACCCAGTGGGTCATGATCCGAGGTACTaGGCGCAGATGGGCGACCGT +
Preference number: 4 (lower is better)
Translates to: AHLEIFSIPTCILVDPVGHDPRY*AQMGDR
Trigger: ACGGTCGCCCATCTGCGCCCAGTACCTCGGATCATG...ACCCACTGGGTCTACCAGTATGCAGGTTGGGATACTGAAAATTTCCAGATGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
CDS-3UTR CCA 90 bp CTGGAAATTTTCAGTATCCCAACCTGCATACTGGTAGACCCAGTGGGTGCCTACTGGGCAGCTCATCTTTaGGCATCTCCAGGCCACAGC +
Preference number: 4 (lower is better)
Translates to: LEIFSIPTCILVDPVGAYWAAHL*ASPGHS
Trigger: GCTGTGGCCTGGAGATGCCCAAAGATGAGCTGCCCA...GTAGGCACCCACTGGGTCTACCAGTATGCAGGTTGGGATACTGAAAATTTCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
CDS-3UTR CCA 90 bp CTGGAAATTTTCAGTATCCCAACCTGCATACTGGTAGACCCAGTGGGTGCCTACGCGGGTCACTCTTGCTaGCTGAAGGGAGTTCACCCA +
Preference number: 4 (lower is better)
Translates to: LEIFSIPTCILVDPVGAYAGHSC*LKGVHP
Trigger: TGGGTGAACTCCCTTCAGCCAGCAAGAGTGACCCGC...GTAGGCACCCACTGGGTCTACCAGTATGCAGGTTGGGATACTGAAAATTTCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
CDS-3UTR CCA 90 bp AGGTCCAGTCTTTCCCTAAGGGCCATCAGTGATGGCCAATTAACGGCCTCACTAGGGCAGGGAGATGTGTaGCTCAGGTATAAGCCACAG +
Preference number: 4 (lower is better)
Translates to: RSSLSLRAISDGQLTASLGQGDV*LRYKPQ
Trigger: CTGTGGCTTATACCTGAGCCACACATCTCCCTGCCC...TAGTGAGGCCGTTAATTGGCCATCACTGATGGCCCTTAGGGAAAGACTGGACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
CDS-3UTR CCA 90 bp ACACCTTTAAGGTGGGCTGAACAGGGATACTGCTTGGCACAGAGGTCCAGTCTTGGGCAGGGAGATGTGTaGCTCAGGTATAAGCCACAG +
Preference number: 4 (lower is better)
Translates to: TPLRWAEQGYCLAQRSSLGQGDV*LRYKPQ
Trigger: CTGTGGCTTATACCTGAGCCACACATCTCCCTGCCC...AAGACTGGACCTCTGTGCCAAGCAGTATCCCTGTTCAGCCCACCTTAAAGGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
CDS-3UTR CCA 90 bp AGCCATTACATGGTGGGGAGGAGCCTTTCTATCTCCAACCACACTCCCACCTCCGGACAGTATGAGCCTTaGTTAAGGCAGGTAGGGGAA +
Preference number: 4 (lower is better)
Translates to: SHYMVGRSLSISNHTPTSGQYEP*LRQVGE
Trigger: TTCCCCTACCTGCCTTAACCAAGGCTCATACTGTCC...GGAGGTGGGAGTGTGGTTGGAGATAGAAAGGCTCCTCCCCACCATGTAATGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345093.9
ENST00000615206.4
3UTR CAA 72 bp TCAAGCCGGACAACGGCACTACAGCCGAACACAGCGTaGTCACAGGCAATCTGCAGCTTTGACAACATGTTC +
Preference number: 4 (lower is better)
Translates to: SSRTTALQPNTA*SQAICSFDNMF
Trigger: GAACATGTTGTCAAAGCTGCAGATTGCCTGTGACAACGCTGTGTTCGGCTGTAGTGCCGTTGTCCGGCTTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549119.1
CDS-3UTR TCA 90 bp CTGGAAATTTTCAGTATCCCAACCTGCATACTGGTAGACCCAGTGGGTGCCTACAGTATTCCTTCCCAGTaGCAAGCTCCATCGCCCAGG +
Preference number: 4 (lower is better)
Translates to: LEIFSIPTCILVDPVGAYSIPSQ*QAPSPR
Trigger: CCTGGGCGATGGAGCTTGTCACTGGGAAGGAATACT...GTAGGCACCCACTGGGTCTACCAGTATGCAGGTTGGGATACTGAAAATTTCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
CDS-3UTR TCA 90 bp CATCTGGAAATTTTCAGTATCCCAACCTGCATACTGGTAGACCCAGTGGGTGCCCTGCTGCTGTACCACTaGGCGCAGGTGCTTAATGCA +
Preference number: 4 (lower is better)
Translates to: HLEIFSIPTCILVDPVGALLLYH*AQVLNA
Trigger: TGCATTAAGCACCTGCGCTCAGTGGTACAGCAGCAG...GGCACCCACTGGGTCTACCAGTATGCAGGTTGGGATACTGAAAATTTCCAGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
CDS-3UTR TCA 90 bp TCTGGAAATTTTCAGTATCCCAACCTGCATACTGGTAGACCCAGTGGGTGCCTATCCCACCTGAAAGGCTaGGCAAACTACCCCAAGGCC +
Preference number: 4 (lower is better)
Translates to: SGNFQYPNLHTGRPSGCLSHLKG*ANYPKA
Trigger: GGCCTTGGGGTAGTTTGCTCAGCCTTTCAGGTGGGA...TAGGCACCCACTGGGTCTACCAGTATGCAGGTTGGGATACTGAAAATTTCCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
CDS-3UTR TCA 90 bp AAACACATCAACCCCCAACAGATTAACCCCTACCCTAAACCCTGGCATTCCCTATCCCACCTGAAAGGCTaGGCAAACTACCCCAAGGCC +
Preference number: 4 (lower is better)
Translates to: KHINPQQINPYPKPWHSLSHLKG*ANYPKA
Trigger: GGCCTTGGGGTAGTTTGCTCAGCCTTTCAGGTGGGA...TAGGGAATGCCAGGGTTTAGGGTAGGGGTTAATCTGTTGGGGGTTGATGTGTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
CDS-3UTR TCA 90 bp TTGGCACAGAGGTCCAGTCTTTCCCTAAGGGCCATCAGTGATGGCCAATTAACGACCTTTAAGGTGGGCTaGACAGGGATACTGCTTGGC +
Preference number: 4 (lower is better)
Translates to: LAQRSSLSLRAISDGQLTTFKVG*TGILLG
Trigger: GCCAAGCAGTATCCCTGTTCAGCCCACCTTAAAGGT...CGTTAATTGGCCATCACTGATGGCCCTTAGGGAAAGACTGGACCTCTGTGCCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
CDS-3UTR TCA 90 bp GGGAAGCACACAGTTCAGATCACTAGAGAGCTTTGGCTGCTACAGAACAGGAGAATGGTCTCGAACTCCTaGCCTTGTGATCCACCCACC +
Preference number: 4 (lower is better)
Translates to: GKHTVQITRELWLLQNRRMVSNS*PCDPPT
Trigger: GGTGGGTGGATCACAAGGTCAGGAGTTCGAGACCAT...TCTCCTGTTCTGTAGCAGCCAAAGCTCTCTAGTGATCTGAACTGTGTGCTTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345093.9
ENST00000615206.4
CDS-3UTR TCA 90 bp ACACCTTTAAGGTGGGCTGAACAGGGATACTGCTTGGCACAGAGGTCCAGTCTTAGGCTGGCAGAGAAATaGCCTATTGAAGGTGGCAGC +
Preference number: 4 (lower is better)
Translates to: TPLRWAEQGYCLAQRSSLRLAEK*PIEGGS
Trigger: GCTGCCACCTTCAATAGGTCATTTCTCTGCCAGCCT...AAGACTGGACCTCTGTGCCAAGCAGTATCCCTGTTCAGCCCACCTTAAAGGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394013.6
ENST00000547967.5
CDS-3UTR GCA 90 bp AAATGGATGGAGGTGGGGGCTTTCCCACCCAGACTGATAATTTATAGACATTTTACAGTACTGCCCTGGTaGCGGGTCCCAGCCTCTCCC +
Preference number: 4 (lower is better)
Translates to: KWMEVGAFPPRLIIYRHFTVLPW*RVPASP
Trigger: GGGAGAGGCTGGGACCCGGCACCAGGGCAGTACTGT...AAAATGTCTATAAATTATCAGTCTGGGTGGGAAAGCCCCCACCTCCATCCATTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
CDS-3UTR GCA 90 bp AGCCATTACATGGTGGGGAGGAGCCTTTCTATCTCCAACCACACTCCCACCTCCACCACTGAGCGCAGGTaGTTAATGCAGTTATGGTTG +
Preference number: 4 (lower is better)
Translates to: SHYMVGRSLSISNHTPTSTTERR*LMQLWL
Trigger: CAACCATAACTGCATTAAGCACCTGCGCTCAGTGGT...GGAGGTGGGAGTGTGGTTGGAGATAGAAAGGCTCCTCCCCACCATGTAATGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345093.9
ENST00000615206.4
CDS-3UTR GCA 90 bp GCTCATCTGGAAATTTTCAGTATCCCAACCTGCATACTGGTAGACCCAGTGGGTATGCGTGTCTGCTGCTaGTGTACCACTGAGCGCAGG +
Preference number: 4 (lower is better)
Translates to: AHLEIFSIPTCILVDPVGMRVCC*CTTERR
Trigger: CCTGCGCTCAGTGGTACAGCAGCAGCAGACACGCAT...ACCCACTGGGTCTACCAGTATGCAGGTTGGGATACTGAAAATTTCCAGATGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
CDS-3UTR GCA 90 bp AGCACACAGTTCAGATCACTAGAGAGCTTTGGCTGCTACAGAACAGGAGATAGGCGTCTTCTCCAGCTCTaGGATGCGTGTCTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: STQFRSLESFGCYRTGDRRLLQL*DACLLL
Trigger: CAGCAGCAGACACGCATCGCAGAGCTGGAGAAGACG...CCTATCTCCTGTTCTGTAGCAGCCAAAGCTCTCTAGTGATCTGAACTGTGTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345093.9
ENST00000615206.4
CDS-3UTR GCA 90 bp GGAAGCTCCTCATTTCAGTTGGGGTTACAGAGGTTTGGGGCAGATATCGTAAGTCCTGCTTGCCAGGGATaGGCTTGGCCACGTAGTTCT +
Preference number: 4 (lower is better)
Translates to: GSSSFQLGLQRFGADIVSPACQG*AWPRSS
Trigger: AGAACTACGTGGCCAAGCGCATCCCTGGCAAGCAGG...ACTTACGATATCTGCCCCAAACCTCTGTAACCCCAACTGAAATGAGGAGCTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345093.9
ENST00000615206.4
CDS-3UTR GCA 90 bp GCCACAAGAGGCAGTGCCAACCATATTTTAGCAAAAGCTAGGAGTAGCTTCTTGCGACAACAGCCTGCTTaGCAGGGATGCGCTTGGCCA +
Preference number: 4 (lower is better)
Translates to: ATRGSANHILAKARSSFLRQQPA*QGCAWP
Trigger: TGGCCAAGCGCATCCCTGGCAAGCAGGCTGTTGTCG...CAAGAAGCTACTCCTAGCTTTTGCTAAAATATGGTTGGCACTGCCTCTTGTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
CDS-3UTR GCA 90 bp ACACCTTTAAGGTGGGCTGAACAGGGATACTGCTTGGCACAGAGGTCCAGTCTTATGTCATCCCCCATGTaGTGGTTCTCACAGGCCATC +
Preference number: 4 (lower is better)
Translates to: TPLRWAEQGYCLAQRSSLMSSPM*WFSQAI
Trigger: GATGGCCTGTGAGAACCAGCACATGGGGGATGACAT...AAGACTGGACCTCTGTGCCAAGCAGTATCCCTGTTCAGCCCACCTTAAAGGTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
CDS-3UTR GCA 90 bp AGGTCCAGTCTTTCCCTAAGGGCCATCAGTGATGGCCAATTAACGGCCTCACTAGACTCAGGTCCCAGCTaGTGGAGTGATGGGATTTTC +
Preference number: 4 (lower is better)
Translates to: RSSLSLRAISDGQLTASLDSGPS*WSDGIF
Trigger: GAAAATCCCATCACTCCAGCAGCTGGGACCTGAGTC...TAGTGAGGCCGTTAATTGGCCATCACTGATGGCCCTTAGGGAAAGACTGGACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
CDS-3UTR GCA 90 bp AGAGGGACGATTAGAGATTCCTTCCTCTGTCCTGATCCTCCAGGGAAATTGAATCCCAAGGCCCTTCAGTaGCAGAAGGGCAGGGAGATG +
Preference number: 4 (lower is better)
Translates to: RGTIRDSFLCPDPPGKLNPKALQ*QKGREM
Trigger: CATCTCCCTGCCCTTCTGGCACTGAAGGGCCTTGGG...ATTCAATTTCCCTGGAGGATCAGGACAGAGGAAGGAATCTCTAATCGTCCCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
CDS-3UTR GCA 90 bp TGGATGGAGGTGGGGGCTTTCCCACCCAGACTGATAATTTATAGACATTTTAGGCCCAAGGCCCTTCAGTaGCAGAAGGGCAGGGAGATG +
Preference number: 4 (lower is better)
Translates to: WMEVGAFPPRLIIYRHFRPKALQ*QKGREM
Trigger: CATCTCCCTGCCCTTCTGGCACTGAAGGGCCTTGGG...CCTAAAATGTCTATAAATTATCAGTCTGGGTGGGAAAGCCCCCACCTCCATCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
CDS-3UTR CCA 90 bp ATAGCCAGTCGAGTTCTCTTATATCTCTTCCACGCCATGCGCAAATATCATGACCAGGAGTACTCGCCCTaGAAGCGGCCTGGAGTCTCC +
Preference number: 4 (lower is better)
Translates to: IASRVLLYLFHAMRKYHDQEYSP*KRPGVS
Trigger: GGAGACTCCAGGCCGCTTCCAGGGCGAGTACTCCTG...GTCATGATATTTGCGCATGGCGTGGAAGAGATATAAGAGAACTCGACTGGCTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547967.5
CDS-3UTR CCA 90 bp TGCTGCTGCTGTACCACTGAGCGCAGGTGCTTAATGCAGTTATGGTTGGGCAGCTCGTCAACATCCCCCTaGAAACGGGTTACATCATAC +
Preference number: 4 (lower is better)
Translates to: CCCCTTERRCLMQLWLGSSSTSP*KRVTSY
Trigger: GTATGATGTAACCCGTTTCCAGGGGGATGTTGACGA...GCTGCCCAACCATAACTGCATTAAGCACCTGCGCTCAGTGGTACAGCAGCAGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000549119.1
CDS-3UTR CCA 90 bp TCTGGAAATTTTCAGTATCCCAACCTGCATACTGGTAGACCCAGTGGGTGCCTAGCGGGTCACTCTTGCTaGCTGAAGGGAGTTCACCCA +
Preference number: 4 (lower is better)
Translates to: SGNFQYPNLHTGRPSGCLAGHSC*LKGVHP
Trigger: TGGGTGAACTCCCTTCAGCCAGCAAGAGTGACCCGC...TAGGCACCCACTGGGTCTACCAGTATGCAGGTTGGGATACTGAAAATTTCCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
CDS-3UTR CCA 90 bp ACACCTTTAAGGTGGGCTGAACAGGGATACTGCTTGGCACAGAGGTCCAGTCTTACTGCTCTGATTCCCTaGTTTTGGAGGAGAGGGACG +
Preference number: 4 (lower is better)
Translates to: TPLRWAEQGYCLAQRSSLTALIP*FWRRGT
Trigger: CGTCCCTCTCCTCCAAAACCAGGGAATCAGAGCAGT...AAGACTGGACCTCTGTGCCAAGCAGTATCCCTGTTCAGCCCACCTTAAAGGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
CDS-3UTR CCA 90 bp CTGGAAATTTTCAGTATCCCAACCTGCATACTGGTAGACCCAGTGGGTGCCTACCCACCCCAATCCCAGTaGAGCCATGATCCAACTACC +
Preference number: 4 (lower is better)
Translates to: LEIFSIPTCILVDPVGAYPPQSQ*SHDPTT
Trigger: GGTAGTTGGATCATGGCTCCACTGGGATTGGGGTGG...GTAGGCACCCACTGGGTCTACCAGTATGCAGGTTGGGATACTGAAAATTTCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345093.9
ENST00000615206.4
CDS-3UTR CCA 90 bp TTGGCACAGAGGTCCAGTCTTTCCCTAAGGGCCATCAGTGATGGCCAATTAACGACAATGTCCCAGAGCTaGAACCCTACTCCCCTCAAG +
Preference number: 4 (lower is better)
Translates to: LAQRSSLSLRAISDGQLTTMSQS*NPTPLK
Trigger: CTTGAGGGGAGTAGGGTTCCAGCTCTGGGACATTGT...CGTTAATTGGCCATCACTGATGGCCCTTAGGGAAAGACTGGACCTCTGTGCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345093.9
ENST00000615206.4
CDS-3UTR TCA 90 bp GCTCATCTGGAAATTTTCAGTATCCCAACCTGCATACTGGTAGACCCAGTGGGTAGTATTCCTTCCCAGTaGCAAGCTCCATCGCCCAGG +
Preference number: 4 (lower is better)
Translates to: AHLEIFSIPTCILVDPVGSIPSQ*QAPSPR
Trigger: CCTGGGCGATGGAGCTTGTCACTGGGAAGGAATACT...ACCCACTGGGTCTACCAGTATGCAGGTTGGGATACTGAAAATTTCCAGATGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
CDS-3UTR TCA 90 bp TTGGCACAGAGGTCCAGTCTTTCCCTAAGGGCCATCAGTGATGGCCAATTAACGTCCACTCAGTGCCACTaGAGAGATTCTCCCAGTAAC +
Preference number: 4 (lower is better)
Translates to: LAQRSSLSLRAISDGQLTSTQCH*RDSPSN
Trigger: GTTACTGGGAGAATCTCTTCAGTGGCACTGAGTGGA...CGTTAATTGGCCATCACTGATGGCCCTTAGGGAAAGACTGGACCTCTGTGCCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
CDS-3UTR TCA 90 bp CGCTCGTGGGCATTTTCAATCAGCTCGTTGACAATAGAAGCAGGACAGCCACTCTCCACTCAGTGCCACTaGAGAGATTCTCCCAGTAAC +
Preference number: 4 (lower is better)
Translates to: RSWAFSISSLTIEAGQPLSTQCH*RDSPSN
Trigger: GTTACTGGGAGAATCTCTTCAGTGGCACTGAGTGGA...GAGTGGCTGTCCTGCTTCTATTGTCAACGAGCTGATTGAAAATGCCCACGAGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547967.5
CDS-3UTR TCA 90 bp GCTCATCTGGAAATTTTCAGTATCCCAACCTGCATACTGGTAGACCCAGTGGGTACAACATGTTCCGCATaGTCCGAGGTACTGGGCGCA +
Preference number: 4 (lower is better)
Translates to: AHLEIFSIPTCILVDPVGTTCSA*SEVLGA
Trigger: TGCGCCCAGTACCTCGGATCATGCGGAACATGTTGT...ACCCACTGGGTCTACCAGTATGCAGGTTGGGATACTGAAAATTTCCAGATGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
CDS-3UTR TCA 90 bp CATCTGGAAATTTTCAGTATCCCAACCTGCATACTGGTAGACCCAGTGGGTGCCTCACAGTCGCTGAGGTaGGACATGAGGTTGTCAAGC +
Preference number: 4 (lower is better)
Translates to: HLEIFSIPTCILVDPVGASQSLR*DMRLSS
Trigger: GCTTGACAACCTCATGTCTCACCTCAGCGACTGTGA...GGCACCCACTGGGTCTACCAGTATGCAGGTTGGGATACTGAAAATTTCCAGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
CDS-3UTR TCA 90 bp TCATCTGGAAATTTTCAGTATCCCAACCTGCATACTGGTAGACCCAGTGGGTGCTCTGAAGGTTGGGGTTaGCACTGCGGATTGCACGCA +
Preference number: 4 (lower is better)
Translates to: SSGNFQYPNLHTGRPSGCSEGWG*HCGLHA
Trigger: TGCGTGCAATCCGCAGTGTCAACCCCAACCTTCAGA...GCACCCACTGGGTCTACCAGTATGCAGGTTGGGATACTGAAAATTTCCAGATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
CDS-3UTR TCA 90 bp TCTGGAAATTTTCAGTATCCCAACCTGCATACTGGTAGACCCAGTGGGTGCCTAGTCTCCTCCAGGTTCTaGAGGTTGGGGTTGACACTG +
Preference number: 4 (lower is better)
Translates to: SGNFQYPNLHTGRPSGCLVSSRF*RLGLTL
Trigger: CAGTGTCAACCCCAACCTTCAGAACCTGGAGGAGAC...TAGGCACCCACTGGGTCTACCAGTATGCAGGTTGGGATACTGAAAATTTCCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
CDS-3UTR TCA 90 bp ATTTCTTCAGGATGTCTGCTGCTTAGAGTCAACAGGCCTGACTGCTCTGATTCCGTCACTCTTGCTGGCTaGAGGGAGTTCACCCACTCT +
Preference number: 4 (lower is better)
Translates to: ISSGCLLLRVNRPDCSDSVTLAG*REFTHS
Trigger: AGAGTGGGTGAACTCCCTTCAGCCAGCAAGAGTGAC...GGAATCAGAGCAGTCAGGCCTGTTGACTCTAAGCAGCAGACATCCTGAAGAAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000615206.4
CDS-3UTR TCA 90 bp TTGGCACAGAGGTCCAGTCTTTCCCTAAGGGCCATCAGTGATGGCCAATTAACGCATGCGCAAATATCATaGCAAGGCCTGGCTCTTGCA +
Preference number: 4 (lower is better)
Translates to: LAQRSSLSLRAISDGQLTHAQIS*QGLALA
Trigger: TGCAAGAGCCAGGCCTTGTCATGATATTTGCGCATG...CGTTAATTGGCCATCACTGATGGCCCTTAGGGAAAGACTGGACCTCTGTGCCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
CDS-3UTR TCA 90 bp TTTCTTCAGGATGTCTGCTGCTTAGAGTCAACAGGCCTGACTGCTCTGATTCCCTCTGGGTTTCCCACCTaGAAGGCTGAGCAAACTACC +
Preference number: 4 (lower is better)
Translates to: FLQDVCCLESTGLTALIPSGFPT*KAEQTT
Trigger: GGTAGTTTGCTCAGCCTTTCAGGTGGGAAACCCAGA...GGGAATCAGAGCAGTCAGGCCTGTTGACTCTAAGCAGCAGACATCCTGAAGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
CDS-3UTR TCA 90 bp AAACACATCAACCCCCAACAGATTAACCCCTACCCTAAACCCTGGCATTCCCTAATCCCAGTGGAGCCATaGTCCAACTACCCAGACCTG +
Preference number: 4 (lower is better)
Translates to: KHINPQQINPYPKPWHSLIPVEP*SNYPDL
Trigger: CAGGTCTGGGTAGTTGGATCATGGCTCCACTGGGAT...TAGGGAATGCCAGGGTTTAGGGTAGGGGTTAATCTGTTGGGGGTTGATGTGTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000345093.9
ENST00000615206.4
CDS-3UTR TCA 90 bp CTGGAAATTTTCAGTATCCCAACCTGCATACTGGTAGACCCAGTGGGTGCCTACATGGGAAAGCAGCTGTaGAGTGCACACTACTCCCAG +
Preference number: 4 (lower is better)
Translates to: LEIFSIPTCILVDPVGAYMGKQL*SAHYSQ
Trigger: CTGGGAGTAGTGTGCACTTCACAGCTGCTTTCCCAT...GTAGGCACCCACTGGGTCTACCAGTATGCAGGTTGGGATACTGAAAATTTCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345093.9
ENST00000615206.4
CDS-3UTR TCA 90 bp CTGGAAATTTTCAGTATCCCAACCTGCATACTGGTAGACCCAGTGGGTGCCTACAGGCTGGCAGAGAAATaGCCTATTGAAGGTGGCAGC +
Preference number: 4 (lower is better)
Translates to: LEIFSIPTCILVDPVGAYRLAEK*PIEGGS
Trigger: GCTGCCACCTTCAATAGGTCATTTCTCTGCCAGCCT...GTAGGCACCCACTGGGTCTACCAGTATGCAGGTTGGGATACTGAAAATTTCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394013.6
ENST00000547967.5
CDS-3UTR TCA 90 bp GGGAAGCACACAGTTCAGATCACTAGAGAGCTTTGGCTGCTACAGAACAGGAGACACCATCCCTCCTCCTaGACCCCAGTTATTTCAACC +
Preference number: 4 (lower is better)
Translates to: GKHTVQITRELWLLQNRRHHPSS*TPVIST
Trigger: GGTTGAAATAACTGGGGTTCAGGAGGAGGGATGGTG...TCTCCTGTTCTGTAGCAGCCAAAGCTCTCTAGTGATCTGAACTGTGTGCTTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615206.4
CDS-3UTR TCA 90 bp TCTGGAAATTTTCAGTATCCCAACCTGCATACTGGTAGACCCAGTGGGTGCCTAGTCACTCTTGCTGGCTaGAGGGAGTTCACCCACAGT +
Preference number: 4 (lower is better)
Translates to: SGNFQYPNLHTGRPSGCLVTLAG*REFTHS
Trigger: ACTGTGGGTGAACTCCCTTCAGCCAGCAAGAGTGAC...TAGGCACCCACTGGGTCTACCAGTATGCAGGTTGGGATACTGAAAATTTCCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547967.5
CDS-3UTR GCA 90 bp AAACTTGTAGGAAAGAAGAGCTCATCTGGAAATTTTCAGTATCCCAACCTGCATCAGCGGCCACAGTACTaGCCTGGTGCCGGGTCCCAG +
Preference number: 4 (lower is better)
Translates to: KLVGKKSSSGNFQYPNLHQRPQY*PGAGSQ
Trigger: CTGGGACCCGGCACCAGGGCAGTACTGTGGCCGCTG...ATGCAGGTTGGGATACTGAAAATTTCCAGATGAGCTCTTCTTTCCTACAAGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
CDS-3UTR GCA 90 bp AAGGTGAGAGAAAGGCAAAAGCAGAGGGGAAACCTTCTCAAGAAAGGGAGTAATGCGATGCGTGTCTGCTaGTGCTGTACCACTGAGCGC +
Preference number: 4 (lower is better)
Translates to: KVRERQKQRGNLLKKGSNAMRVC*CCTTER
Trigger: GCGCTCAGTGGTACAGCAGCAGCAGACACGCATCGC...ATTACTCCCTTTCTTGAGAAGGTTTCCCCTCTGCTTTTGCCTTTCTCTCACCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345093.9
ENST00000615206.4
CDS-3UTR GCA 90 bp TCATCTGGAAATTTTCAGTATCCCAACCTGCATACTGGTAGACCCAGTGGGTGCTCTGCGATGCGTGTCTaGTGCTGCTGTACCACTGAG +
Preference number: 4 (lower is better)
Translates to: SSGNFQYPNLHTGRPSGCSAMRV*CCCTTE
Trigger: CTCAGTGGTACAGCAGCAGCAGACACGCATCGCAGA...GCACCCACTGGGTCTACCAGTATGCAGGTTGGGATACTGAAAATTTCCAGATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
CDS-3UTR GCA 90 bp TCAGCCGAGGACTCCCTTGGCTCTTCCTATATTAAAGCCAAAGGTTGTGCTGAATCTGCGATGCGTGTCTaGTGCTGCTGTACCACTGAG +
Preference number: 4 (lower is better)
Translates to: SAEDSLGSSYIKAKGCAESAMRV*CCCTTE
Trigger: CTCAGTGGTACAGCAGCAGCAGACACGCATCGCAGA...TTCAGCACAACCTTTGGCTTTAATATAGGAAGAGCCAAGGGAGTCCTCGGCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345093.9
ENST00000615206.4
CDS-3UTR GCA 90 bp TCTGGAAATTTTCAGTATCCCAACCTGCATACTGGTAGACCCAGTGGGTGCCTATCTCCAGCTCTGCGATaGGTGTCTGCTGCTGCTGTA +
Preference number: 4 (lower is better)
Translates to: SGNFQYPNLHTGRPSGCLSPALR*VSAAAV
Trigger: TACAGCAGCAGCAGACACGCATCGCAGAGCTGGAGA...TAGGCACCCACTGGGTCTACCAGTATGCAGGTTGGGATACTGAAAATTTCCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
CDS-3UTR GCA 90 bp GGAAAATGGATGGAGGTGGGGGCTTTCCCACCCAGACTGATAATTTATAGACATCGTCTTCTCCAGCTCTaGGATGCGTGTCTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: GKWMEVGAFPPRLIIYRHRLLQL*DACLLL
Trigger: CAGCAGCAGACACGCATCGCAGAGCTGGAGAAGACG...ATGTCTATAAATTATCAGTCTGGGTGGGAAAGCCCCCACCTCCATCCATTTTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
CDS-3UTR GCA 90 bp CCTGATAGCCAGTCGAGTTCTCTTATATCTCTTCCACGCCATGCGCAAATATCACCTGCTTGCCAGGGATaGGCTTGGCCACGTAGTTCT +
Preference number: 4 (lower is better)
Translates to: PDSQSSSLISLPRHAQISPACQG*AWPRSS
Trigger: AGAACTACGTGGCCAAGCGCATCCCTGGCAAGCAGG...TGATATTTGCGCATGGCGTGGAAGAGATATAAGAGAACTCGACTGGCTATCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547967.5
CDS-3UTR GCA 90 bp TCTGGAAATTTTCAGTATCCCAACCTGCATACTGGTAGACCCAGTGGGTGCCTAATCACGACAACAGCCTaGTTGCCAGGGATGCGCTTG +
Preference number: 4 (lower is better)
Translates to: SGNFQYPNLHTGRPSGCLITTTA*LPGMRL
Trigger: CAAGCGCATCCCTGGCAAGCAGGCTGTTGTCGTGAT...TAGGCACCCACTGGGTCTACCAGTATGCAGGTTGGGATACTGAAAATTTCCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
CDS-3UTR GCA 90 bp TCATCTGGAAATTTTCAGTATCCCAACCTGCATACTGGTAGACCCAGTGGGTGCATCACGACAACAGCCTaGTTGCCAGGGATGCGCTTG +
Preference number: 4 (lower is better)
Translates to: SSGNFQYPNLHTGRPSGCITTTA*LPGMRL
Trigger: CAAGCGCATCCCTGGCAAGCAGGCTGTTGTCGTGAT...GCACCCACTGGGTCTACCAGTATGCAGGTTGGGATACTGAAAATTTCCAGATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
CDS-3UTR GCA 90 bp CATCTGGAAATTTTCAGTATCCCAACCTGCATACTGGTAGACCCAGTGGGTGCCATGTCATCCCCCATGTaGTGGTTCTCACAGGCCATC +
Preference number: 4 (lower is better)
Translates to: HLEIFSIPTCILVDPVGAMSSPM*WFSQAI
Trigger: GATGGCCTGTGAGAACCAGCACATGGGGGATGACAT...GGCACCCACTGGGTCTACCAGTATGCAGGTTGGGATACTGAAAATTTCCAGATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
CDS-3UTR GCA 90 bp GCTCATCTGGAAATTTTCAGTATCCCAACCTGCATACTGGTAGACCCAGTGGGTGTCACCAGGCTGGAGTaGAGTGGCATGATCTCAGCT +
Preference number: 4 (lower is better)
Translates to: AHLEIFSIPTCILVDPVGVTRLE*SGMISA
Trigger: AGCTGAGATCATGCCACTGCACTCCAGCCTGGTGAC...ACCCACTGGGTCTACCAGTATGCAGGTTGGGATACTGAAAATTTCCAGATGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345093.9
ENST00000615206.4
CDS-3UTR CCA 90 bp CATGATCCAACTACCCAGACCTGCAGCAAGCTAGCCTGGAATAAAATTCTGAGATGGGCAGCTCATCTTTaGGCATCTCCAGGCCACAGC +
Preference number: 4 (lower is better)
Translates to: HDPTTQTCSKLAWNKILRWAAHL*ASPGHS
Trigger: GCTGTGGCCTGGAGATGCCCAAAGATGAGCTGCCCA...TCTCAGAATTTTATTCCAGGCTAGCTTGCTGCAGGTCTGGGTAGTTGGATCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345093.9
ENST00000615206.4
CDS-3UTR CCA 90 bp TCCCTAAGGGCCATCAGTGATGGCCAATTAACGGCCTCACTACTTATTTCTAGATGGGCAGCTCATCTTTaGGCATCTCCAGGCCACAGC +
Preference number: 4 (lower is better)
Translates to: SLRAISDGQLTASLLISRWAAHL*ASPGHS
Trigger: GCTGTGGCCTGGAGATGCCCAAAGATGAGCTGCCCA...TCTAGAAATAAGTAGTGAGGCCGTTAATTGGCCATCACTGATGGCCCTTAGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
CDS-3UTR CCA 90 bp GTGCTCACAGTCGCTGAGGTGAGACATGAGGTTGTCAAGCCGGACAACGGCACTTGCTTAATGCAGTTATaGTTGGGCAGCTCATCTTTG +
Preference number: 4 (lower is better)
Translates to: VLTVAEVRHEVVKPDNGTCLMQL*LGSSSL
Trigger: CAAAGATGAGCTGCCCAACCATAACTGCATTAAGCA...AGTGCCGTTGTCCGGCTTGACAACCTCATGTCTCACCTCAGCGACTGTGAGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549119.1
CDS-3UTR CCA 90 bp TTGGCACAGAGGTCCAGTCTTTCCCTAAGGGCCATCAGTGATGGCCAATTAACGTATGCCTTTAGCAGCTaGATGTCTCGCTTCTGCTCC +
Preference number: 4 (lower is better)
Translates to: LAQRSSLSLRAISDGQLTYAFSS*MSRFCS
Trigger: GGAGCAGAAGCGAGACATCCAGCTGCTAAAGGCATA...CGTTAATTGGCCATCACTGATGGCCCTTAGGGAAAGACTGGACCTCTGTGCCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
CDS-3UTR CCA 90 bp GTAAGTTCAGCCGAGGACTCCCTTGGCTCTTCCTATATTAAAGCCAAAGGTTGTGCGGGTCACTCTTGCTaGCTGAAGGGAGTTCACCCA +
Preference number: 4 (lower is better)
Translates to: VSSAEDSLGSSYIKAKGCAGHSC*LKGVHP
Trigger: TGGGTGAACTCCCTTCAGCCAGCAAGAGTGACCCGC...ACAACCTTTGGCTTTAATATAGGAAGAGCCAAGGGAGTCCTCGGCTGAACTTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345093.9
ENST00000615206.4
CDS-3UTR CCA 90 bp AGGTCCAGTCTTTCCCTAAGGGCCATCAGTGATGGCCAATTAACGGCCTCACTACAAAGGGAGGAAATCTaGGTTTCCCACCTGAAAGGC +
Preference number: 4 (lower is better)
Translates to: RSSLSLRAISDGQLTASLQREEI*VSHLKG
Trigger: GCCTTTCAGGTGGGAAACCCAGATTTCCTCCCTTTG...TAGTGAGGCCGTTAATTGGCCATCACTGATGGCCCTTAGGGAAAGACTGGACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
CDS-3UTR CCA 90 bp TTTCTTCAGGATGTCTGCTGCTTAGAGTCAACAGGCCTGACTGCTCTGATTCCCACTGCTCTGATTCCCTaGTTTTGGAGGAGAGGGACG +
Preference number: 4 (lower is better)
Translates to: FLQDVCCLESTGLTALIPTALIP*FWRRGT
Trigger: CGTCCCTCTCCTCCAAAACCAGGGAATCAGAGCAGT...GGGAATCAGAGCAGTCAGGCCTGTTGACTCTAAGCAGCAGACATCCTGAAGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
CDS-3UTR CCA 90 bp AGCACACAGTTCAGATCACTAGAGAGCTTTGGCTGCTACAGAACAGGAGATAGGCCACCCCAATCCCAGTaGAGCCATGATCCAACTACC +
Preference number: 4 (lower is better)
Translates to: STQFRSLESFGCYRTGDRPPQSQ*SHDPTT
Trigger: GGTAGTTGGATCATGGCTCCACTGGGATTGGGGTGG...CCTATCTCCTGTTCTGTAGCAGCCAAAGCTCTCTAGTGATCTGAACTGTGTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345093.9
ENST00000615206.4
CDS-3UTR TCA 90 bp TGTACCACTGAGCGCAGGTGCTTAATGCAGTTATGGTTGGGCAGCTCATCTTTGTCCACTCAGTGCCACTaGAGAGATTCTCCCAGTAAC +
Preference number: 4 (lower is better)
Translates to: CTTERRCLMQLWLGSSSLSTQCH*RDSPSN
Trigger: GTTACTGGGAGAATCTCTTCAGTGGCACTGAGTGGA...CAAAGATGAGCTGCCCAACCATAACTGCATTAAGCACCTGCGCTCAGTGGTACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549119.1
CDS-3UTR TCA 90 bp TCTGGAAATTTTCAGTATCCCAACCTGCATACTGGTAGACCCAGTGGGTGCCTACCCATGTCTCATCACTaGAACCCAGGTCCTTCCAAG +
Preference number: 4 (lower is better)
Translates to: SGNFQYPNLHTGRPSGCLPMSHH*NPGPSK
Trigger: CTTGGAAGGACCTGGGTTTCAGTGATGAGACATGGG...TAGGCACCCACTGGGTCTACCAGTATGCAGGTTGGGATACTGAAAATTTCCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
CDS-3UTR TCA 90 bp ATTTCTTCAGGATGTCTGCTGCTTAGAGTCAACAGGCCTGACTGCTCTGATTCCCCCATGTCTCATCACTaGAACCCAGGTCCTTCCAAG +
Preference number: 4 (lower is better)
Translates to: ISSGCLLLRVNRPDCSDSPMSHH*NPGPSK
Trigger: CTTGGAAGGACCTGGGTTTCAGTGATGAGACATGGG...GGAATCAGAGCAGTCAGGCCTGTTGACTCTAAGCAGCAGACATCCTGAAGAAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
CDS-3UTR TCA 90 bp TCTGGAAATTTTCAGTATCCCAACCTGCATACTGGTAGACCCAGTGGGTGCCTAGGACATGTCTGTTGCTaGGAGAACCACTGGGTGATG +
Preference number: 4 (lower is better)
Translates to: SGNFQYPNLHTGRPSGCLGHVCC*ENHWVM
Trigger: CATCACCCAGTGGTTCTCTCAGCAACAGACATGTCC...TAGGCACCCACTGGGTCTACCAGTATGCAGGTTGGGATACTGAAAATTTCCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
CDS-3UTR TCA 90 bp AGAGGGACGATTAGAGATTCCTTCCTCTGTCCTGATCCTCCAGGGAAATTGAATACAACATGTTCCGCATaGTCCGAGGTACTGGGCGCA +
Preference number: 4 (lower is better)
Translates to: RGTIRDSFLCPDPPGKLNTTCSA*SEVLGA
Trigger: TGCGCCCAGTACCTCGGATCATGCGGAACATGTTGT...ATTCAATTTCCCTGGAGGATCAGGACAGAGGAAGGAATCTCTAATCGTCCCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
CDS-3UTR TCA 90 bp GTAAGTTCAGCCGAGGACTCCCTTGGCTCTTCCTATATTAAAGCCAAAGGTTGTCTGCTGCTGTACCACTaGGCGCAGGTGCTTAATGCA +
Preference number: 4 (lower is better)
Translates to: VSSAEDSLGSSYIKAKGCLLLYH*AQVLNA
Trigger: TGCATTAAGCACCTGCGCTCAGTGGTACAGCAGCAG...ACAACCTTTGGCTTTAATATAGGAAGAGCCAAGGGAGTCCTCGGCTGAACTTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345093.9
ENST00000615206.4
CDS-3UTR TCA 90 bp ATTTCTTCAGGATGTCTGCTGCTTAGAGTCAACAGGCCTGACTGCTCTGATTCCGTGTTTGTGTTCAGCTaGCGTCTTCTCCAGCTCTGC +
Preference number: 4 (lower is better)
Translates to: ISSGCLLLRVNRPDCSDSVFVFS*RLLQLC
Trigger: GCAGAGCTGGAGAAGACGTCAGCTGAACACAAACAC...GGAATCAGAGCAGTCAGGCCTGTTGACTCTAAGCAGCAGACATCCTGAAGAAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
CDS-3UTR TCA 90 bp GACATGGAATTTAGGATAAAGGCAGACCCTGGGAAGCACACAGTTCAGATCACTGTCTCCTCCAGGTTCTaGAGGTTGGGGTTGACACTG +
Preference number: 4 (lower is better)
Translates to: DMEFRIKADPGKHTVQITVSSRF*RLGLTL
Trigger: CAGTGTCAACCCCAACCTTCAGAACCTGGAGGAGAC...AGTGATCTGAACTGTGTGCTTCCCAGGGTCTGCCTTTATCCTAAATTCCATGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345093.9
ENST00000615206.4
CDS-3UTR TCA 90 bp TGGATGGAGGTGGGGGCTTTCCCACCCAGACTGATAATTTATAGACATTTTAGGGTCACTCTTGCTGGCTaGAGGGAGTTCACCCACTCT +
Preference number: 4 (lower is better)
Translates to: WMEVGAFPPRLIIYRHFRVTLAG*REFTHS
Trigger: AGAGTGGGTGAACTCCCTTCAGCCAGCAAGAGTGAC...CCTAAAATGTCTATAAATTATCAGTCTGGGTGGGAAAGCCCCCACCTCCATCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000615206.4
CDS-3UTR TCA 90 bp GGCAGTGCCAACCATATTTTAGCAAAAGCTAGGAGTAGCTTCTTGCTAAACACACCACCAGGGAGCGCTTaGTTACAGCCTGGAGCACAG +
Preference number: 4 (lower is better)
Translates to: GSANHILAKARSSFLLNTPPGSA*LQPGAQ
Trigger: CTGTGCTCCAGGCTGTAATCAAGCGCTCCCTGGTGG...TGTGTTTAGCAAGAAGCTACTCCTAGCTTTTGCTAAAATATGGTTGGCACTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
CDS-3UTR TCA 90 bp ACATGGGAAAGCAGCTGTGAAGTGCACACTACTCCCAGACATCCTCCTGAAAGATCCCAGCTGCTGGAGTaGTGGGATTTTCTGATTTCC +
Preference number: 4 (lower is better)
Translates to: TWESSCEVHTTPRHPPERSQLLE*WDFLIS
Trigger: GGAAATCAGAAAATCCCATCACTCCAGCAGCTGGGA...TCTTTCAGGAGGATGTCTGGGAGTAGTGTGCACTTCACAGCTGCTTTCCCATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345093.9
ENST00000615206.4
CDS-3UTR TCA 90 bp GGAAGCTCCTCATTTCAGTTGGGGTTACAGAGGTTTGGGGCAGATATCGTAAGTTCTGGGTTTCCCACCTaGAAGGCTGAGCAAACTACC +
Preference number: 4 (lower is better)
Translates to: GSSSFQLGLQRFGADIVSSGFPT*KAEQTT
Trigger: GGTAGTTTGCTCAGCCTTTCAGGTGGGAAACCCAGA...ACTTACGATATCTGCCCCAAACCTCTGTAACCCCAACTGAAATGAGGAGCTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345093.9
ENST00000615206.4
CDS-3UTR TCA 90 bp ATTTCTTCAGGATGTCTGCTGCTTAGAGTCAACAGGCCTGACTGCTCTGATTCCTCTGGGTTTCCCACCTaGAAGGCTGAGCAAACTACC +
Preference number: 4 (lower is better)
Translates to: ISSGCLLLRVNRPDCSDSSGFPT*KAEQTT
Trigger: GGTAGTTTGCTCAGCCTTTCAGGTGGGAAACCCAGA...GGAATCAGAGCAGTCAGGCCTGTTGACTCTAAGCAGCAGACATCCTGAAGAAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
CDS-3UTR TCA 90 bp TGGATGGAGGTGGGGGCTTTCCCACCCAGACTGATAATTTATAGACATTTTAGGCCTAAGGGCCATCAGTaGTGGCCAATTAACGGCCTC +
Preference number: 4 (lower is better)
Translates to: WMEVGAFPPRLIIYRHFRPKGHQ*WPINGL
Trigger: GAGGCCGTTAATTGGCCATCACTGATGGCCCTTAGG...CCTAAAATGTCTATAAATTATCAGTCTGGGTGGGAAAGCCCCCACCTCCATCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
CDS-3UTR TCA 90 bp GCCACAAGAGGCAGTGCCAACCATATTTTAGCAAAAGCTAGGAGTAGCTTCTTGCCTAAGGGCCATCAGTaGTGGCCAATTAACGGCCTC +
Preference number: 4 (lower is better)
Translates to: ATRGSANHILAKARSSFLPKGHQ*WPINGL
Trigger: GAGGCCGTTAATTGGCCATCACTGATGGCCCTTAGG...CAAGAAGCTACTCCTAGCTTTTGCTAAAATATGGTTGGCACTGCCTCTTGTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
CDS-3UTR TCA 90 bp GCTCATCTGGAAATTTTCAGTATCCCAACCTGCATACTGGTAGACCCAGTGGGTTGCCAACAATGTGGCTaGGATAGCCATGATCAGGCC +
Preference number: 4 (lower is better)
Translates to: AHLEIFSIPTCILVDPVGCQQCG*DSHDQA
Trigger: GGCCTGATCATGGCTATCTCAGCCACATTGTTGGCA...ACCCACTGGGTCTACCAGTATGCAGGTTGGGATACTGAAAATTTCCAGATGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
CDS-3UTR GCA 90 bp AGGAGTAGCTTCTTGCTAAACACATCAACCCCCAACAGATTAACCCCTACCCTATCTCCAGCTCTGCGATaGGTGTCTGCTGCTGCTGTA +
Preference number: 4 (lower is better)
Translates to: RSSFLLNTSTPNRLTPTLSPALR*VSAAAV
Trigger: TACAGCAGCAGCAGACACGCATCGCAGAGCTGGAGA...TAGGGTAGGGGTTAATCTGTTGGGGGTTGATGTGTTTAGCAAGAAGCTACTCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
CDS-3UTR GCA 90 bp ACAAGAGGCAGTGCCAACCATATTTTAGCAAAAGCTAGGAGTAGCTTCTTGCTACGACAACAGCCTGCTTaGCAGGGATGCGCTTGGCCA +
Preference number: 4 (lower is better)
Translates to: TRGSANHILAKARSSFLLRQQPA*QGCAWP
Trigger: TGGCCAAGCGCATCCCTGGCAAGCAGGCTGTTGTCG...TAGCAAGAAGCTACTCCTAGCTTTTGCTAAAATATGGTTGGCACTGCCTCTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
CDS-3UTR GCA 90 bp AAATGGATGGAGGTGGGGGCTTTCCCACCCAGACTGATAATTTATAGACATTTTCGACAACAGCCTGCTTaGCAGGGATGCGCTTGGCCA +
Preference number: 4 (lower is better)
Translates to: KWMEVGAFPPRLIIYRHFRQQPA*QGCAWP
Trigger: TGGCCAAGCGCATCCCTGGCAAGCAGGCTGTTGTCG...AAAATGTCTATAAATTATCAGTCTGGGTGGGAAAGCCCCCACCTCCATCCATTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
CDS-3UTR GCA 90 bp CCTGATAGCCAGTCGAGTTCTCTTATATCTCTTCCACGCCATGCGCAAATATCAATCACGACAACAGCCTaGTTGCCAGGGATGCGCTTG +
Preference number: 4 (lower is better)
Translates to: PDSQSSSLISLPRHAQISITTTA*LPGMRL
Trigger: CAAGCGCATCCCTGGCAAGCAGGCTGTTGTCGTGAT...TGATATTTGCGCATGGCGTGGAAGAGATATAAGAGAACTCGACTGGCTATCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547967.5
CDS-3UTR GCA 90 bp TCATCTGGAAATTTTCAGTATCCCAACCTGCATACTGGTAGACCCAGTGGGTGCGACTCAGGTCCCAGCTaGTGGAGTGATGGGATTTTC +
Preference number: 4 (lower is better)
Translates to: SSGNFQYPNLHTGRPSGCDSGPS*WSDGIF
Trigger: GAAAATCCCATCACTCCAGCAGCTGGGACCTGAGTC...GCACCCACTGGGTCTACCAGTATGCAGGTTGGGATACTGAAAATTTCCAGATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
CDS-3UTR GCA 90 bp TTTCTTCAGGATGTCTGCTGCTTAGAGTCAACAGGCCTGACTGCTCTGATTCCCGTCAACAGGCCTGACTaGTCTGATTCCCTGGTTTTG +
Preference number: 4 (lower is better)
Translates to: FLQDVCCLESTGLTALIPVNRPD*SDSLVL
Trigger: CAAAACCAGGGAATCAGAGCAGTCAGGCCTGTTGAC...GGGAATCAGAGCAGTCAGGCCTGTTGACTCTAAGCAGCAGACATCCTGAAGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
CDS-3UTR GCA 90 bp GGAAGCTCCTCATTTCAGTTGGGGTTACAGAGGTTTGGGGCAGATATCGTAAGTGCTGAACAGGGATACTaGTTGGCACAGAGGTCCAGT +
Preference number: 4 (lower is better)
Translates to: GSSSFQLGLQRFGADIVSAEQGY*LAQRSS
Trigger: ACTGGACCTCTGTGCCAAGCAGTATCCCTGTTCAGC...ACTTACGATATCTGCCCCAAACCTCTGTAACCCCAACTGAAATGAGGAGCTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345093.9
ENST00000615206.4
CDS-3UTR GCA 90 bp ACACCTTTAAGGTGGGCTGAACAGGGATACTGCTTGGCACAGAGGTCCAGTCTTAACAATTATGGCCTGTaGCACAAGAGGCAGTGCCAA +
Preference number: 4 (lower is better)
Translates to: TPLRWAEQGYCLAQRSSLNNYGL*HKRQCQ
Trigger: TTGGCACTGCCTCTTGTGGCACAGGCCATAATTGTT...AAGACTGGACCTCTGTGCCAAGCAGTATCCCTGTTCAGCCCACCTTAAAGGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
CDS-3UTR GCA 90 bp TCATCTGGAAATTTTCAGTATCCCAACCTGCATACTGGTAGACCCAGTGGGTGCGGGCACAGGCATCGATaGTGGACTGTCATATCCTTC +
Preference number: 4 (lower is better)
Translates to: SSGNFQYPNLHTGRPSGCGHRHR*WTVISF
Trigger: GAAGGATATGACAGTCCAGCATCGATGCCTGTGCCC...GCACCCACTGGGTCTACCAGTATGCAGGTTGGGATACTGAAAATTTCCAGATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345093.9
ENST00000615206.4
CDS-3UTR GCA 90 bp TTGGCACAGAGGTCCAGTCTTTCCCTAAGGGCCATCAGTGATGGCCAATTAACGCTAGAGAGCTTTGGCTaGTACAGAACAGGAGATAGG +
Preference number: 4 (lower is better)
Translates to: LAQRSSLSLRAISDGQLTLESFG*YRTGDR
Trigger: CCTATCTCCTGTTCTGTAGCAGCCAAAGCTCTCTAG...CGTTAATTGGCCATCACTGATGGCCCTTAGGGAAAGACTGGACCTCTGTGCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345093.9
ENST00000615206.4
CDS-3UTR GCA 90 bp GGAAAATGGATGGAGGTGGGGGCTTTCCCACCCAGACTGATAATTTATAGACATCAGTGGCCCAATCTCTaGTCACTGCAAGCTCTGCCT +
Preference number: 4 (lower is better)
Translates to: GKWMEVGAFPPRLIIYRHQWPNL*SLQALP
Trigger: AGGCAGAGCTTGCAGTGAGCAGAGATTGGGCCACTG...ATGTCTATAAATTATCAGTCTGGGTGGGAAAGCCCCCACCTCCATCCATTTTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000345093.9
ENST00000615206.4
CDS-3UTR GCA 90 bp ACACCTTTAAGGTGGGCTGAACAGGGATACTGCTTGGCACAGAGGTCCAGTCTTGCTTCTCCTCATACTTaGCCCAGGATGATACAACTG +
Preference number: 4 (lower is better)
Translates to: TPLRWAEQGYCLAQRSSLASPHT*PRMIQL
Trigger: CAGTTGTATCATCCTGGGGCAAGTATGAGGAGAAGC...AAGACTGGACCTCTGTGCCAAGCAGTATCCCTGTTCAGCCCACCTTAAAGGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394013.6
ENST00000547967.5
CDS-3UTR GCA 90 bp CATCTGGAAATTTTCAGTATCCCAACCTGCATACTGGTAGACCCAGTGGGTGCCTCACTTTCCTGGACTTaGACTCTGCCTCCTCTTCTC +
Preference number: 4 (lower is better)
Translates to: HLEIFSIPTCILVDPVGASLSWT*TLPPLL
Trigger: GAGAAGAGGAGGCAGAGTGCAAGTCCAGGAAAGTGA...GGCACCCACTGGGTCTACCAGTATGCAGGTTGGGATACTGAAAATTTCCAGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547967.5
CDS-3UTR CCA 90 bp TTGGCACAGAGGTCCAGTCTTTCCCTAAGGGCCATCAGTGATGGCCAATTAACGTCGTCAACATCCCCCTaGAAACGGGTTACATCATAC +
Preference number: 4 (lower is better)
Translates to: LAQRSSLSLRAISDGQLTSSTSP*KRVTSY
Trigger: GTATGATGTAACCCGTTTCCAGGGGGATGTTGACGA...CGTTAATTGGCCATCACTGATGGCCCTTAGGGAAAGACTGGACCTCTGTGCCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
CDS-3UTR CCA 90 bp ACAAGAGGCAGTGCCAACCATATTTTAGCAAAAGCTAGGAGTAGCTTCTTGCTACATGATCCGAGGTACTaGGCGCAGATGGGCGACCGT +
Preference number: 4 (lower is better)
Translates to: TRGSANHILAKARSSFLLHDPRY*AQMGDR
Trigger: ACGGTCGCCCATCTGCGCCCAGTACCTCGGATCATG...TAGCAAGAAGCTACTCCTAGCTTTTGCTAAAATATGGTTGGCACTGCCTCTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
CDS-3UTR CCA 90 bp ATTTCTTCAGGATGTCTGCTGCTTAGAGTCAACAGGCCTGACTGCTCTGATTCCCGCTTGATTACAGCCTaGAGCACAGCATCAGGAGTC +
Preference number: 4 (lower is better)
Translates to: ISSGCLLLRVNRPDCSDSRLITA*STASGV
Trigger: GACTCCTGATGCTGTGCTCCAGGCTGTAATCAAGCG...GGAATCAGAGCAGTCAGGCCTGTTGACTCTAAGCAGCAGACATCCTGAAGAAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
CDS-3UTR CCA 90 bp GCCACAAGAGGCAGTGCCAACCATATTTTAGCAAAAGCTAGGAGTAGCTTCTTGGGCCAGCTACGCTCGTaGGCATTTTCAATCAGCTCG +
Preference number: 4 (lower is better)
Translates to: ATRGSANHILAKARSSFLGQLRS*AFSISS
Trigger: CGAGCTGATTGAAAATGCCCACGAGCGTAGCTGGCC...CAAGAAGCTACTCCTAGCTTTTGCTAAAATATGGTTGGCACTGCCTCTTGTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
CDS-3UTR CCA 90 bp TTGGCACAGAGGTCCAGTCTTTCCCTAAGGGCCATCAGTGATGGCCAATTAACGTATCATGACAAGGCCTaGCTCTTGCACCATGTCATC +
Preference number: 4 (lower is better)
Translates to: LAQRSSLSLRAISDGQLTYHDKA*LLHHVI
Trigger: GATGACATGGTGCAAGAGCCAGGCCTTGTCATGATA...CGTTAATTGGCCATCACTGATGGCCCTTAGGGAAAGACTGGACCTCTGTGCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
CDS-3UTR CCA 90 bp TTTCTTCAGGATGTCTGCTGCTTAGAGTCAACAGGCCTGACTGCTCTGATTCCCCAAAGGGAGGAAATCTaGGTTTCCCACCTGAAAGGC +
Preference number: 4 (lower is better)
Translates to: FLQDVCCLESTGLTALIPQREEI*VSHLKG
Trigger: GCCTTTCAGGTGGGAAACCCAGATTTCCTCCCTTTG...GGGAATCAGAGCAGTCAGGCCTGTTGACTCTAAGCAGCAGACATCCTGAAGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
CDS-3UTR CCA 90 bp GGAAAATGGATGGAGGTGGGGGCTTTCCCACCCAGACTGATAATTTATAGACATGAAAATGGATGGAGGTaGGGGCTTTCCCACCCAGAC +
Preference number: 4 (lower is better)
Translates to: GKWMEVGAFPPRLIIYRHENGWR*GLSHPD
Trigger: GTCTGGGTGGGAAAGCCCCCACCTCCATCCATTTTC...ATGTCTATAAATTATCAGTCTGGGTGGGAAAGCCCCCACCTCCATCCATTTTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
CDS-3UTR CCA 90 bp GAAGCAGGACAGCCACTCTCCACCAGGGAGCGCTTGATTACAGCCTGGAGCACATTATTTCTAGAGATTTaGCTCCACCCTTACCATTTC +
Preference number: 4 (lower is better)
Translates to: EAGQPLSTRERLITAWSTLFLEI*LHPYHF
Trigger: GAAATGGTAAGGGTGGAGCCAAATCTCTAGAAATAA...TGTGCTCCAGGCTGTAATCAAGCGCTCCCTGGTGGAGAGTGGCTGTCCTGCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547967.5
CDS-3UTR CCA 90 bp CATCTGGAAATTTTCAGTATCCCAACCTGCATACTGGTAGACCCAGTGGGTGCCGGACAGTATGAGCCTTaGTTAAGGCAGGTAGGGGAA +
Preference number: 4 (lower is better)
Translates to: HLEIFSIPTCILVDPVGAGQYEP*LRQVGE
Trigger: TTCCCCTACCTGCCTTAACCAAGGCTCATACTGTCC...GGCACCCACTGGGTCTACCAGTATGCAGGTTGGGATACTGAAAATTTCCAGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345093.9
ENST00000615206.4
CDS-3UTR TCA 90 bp AGCACACAGTTCAGATCACTAGAGAGCTTTGGCTGCTACAGAACAGGAGATAGGTGGCTATTCTCCGACTaGGTATTCCTTCCCAGTGAC +
Preference number: 4 (lower is better)
Translates to: STQFRSLESFGCYRTGDRWLFSD*VFLPSD
Trigger: GTCACTGGGAAGGAATACTCAGTCGGAGAATAGCCA...CCTATCTCCTGTTCTGTAGCAGCCAAAGCTCTCTAGTGATCTGAACTGTGTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345093.9
ENST00000615206.4
CDS-3UTR TCA 90 bp TCTGGAAATTTTCAGTATCCCAACCTGCATACTGGTAGACCCAGTGGGTGCCTATGGCTATTCTCCGACTaGGTATTCCTTCCCAGTGAC +
Preference number: 4 (lower is better)
Translates to: SGNFQYPNLHTGRPSGCLWLFSD*VFLPSD
Trigger: GTCACTGGGAAGGAATACTCAGTCGGAGAATAGCCA...TAGGCACCCACTGGGTCTACCAGTATGCAGGTTGGGATACTGAAAATTTCCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
CDS-3UTR TCA 90 bp AGGAGTAGCTTCTTGCTAAACACATCAACCCCCAACAGATTAACCCCTACCCTACCCATGTCTCATCACTaGAACCCAGGTCCTTCCAAG +
Preference number: 4 (lower is better)
Translates to: RSSFLLNTSTPNRLTPTLPMSHH*NPGPSK
Trigger: CTTGGAAGGACCTGGGTTTCAGTGATGAGACATGGG...TAGGGTAGGGGTTAATCTGTTGGGGGTTGATGTGTTTAGCAAGAAGCTACTCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
CDS-3UTR TCA 90 bp TCAGCCGAGGACTCCCTTGGCTCTTCCTATATTAAAGCCAAAGGTTGTGCTGAAAAAGCATGTTCACAATaGGGTGCCTGTACTGGCTCC +
Preference number: 4 (lower is better)
Translates to: SAEDSLGSSYIKAKGCAEKACSQ*GACTGS
Trigger: GGAGCCAGTACAGGCACCTCATTGTGAACATGCTTT...TTCAGCACAACCTTTGGCTTTAATATAGGAAGAGCCAAGGGAGTCCTCGGCTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000345093.9
ENST00000615206.4
CDS-3UTR TCA 90 bp GACATGGAATTTAGGATAAAGGCAGACCCTGGGAAGCACACAGTTCAGATCACTGGACATGTCTGTTGCTaGGAGAACCACTGGGTGATG +
Preference number: 4 (lower is better)
Translates to: DMEFRIKADPGKHTVQITGHVCC*ENHWVM
Trigger: CATCACCCAGTGGTTCTCTCAGCAACAGACATGTCC...AGTGATCTGAACTGTGTGCTTCCCAGGGTCTGCCTTTATCCTAAATTCCATGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345093.9
ENST00000615206.4
CDS-3UTR TCA 90 bp AACCAGAGTAAGTATAGCAGCGTTTTCAAATTCCTGAGCACAATGTCCCAGAGCACAACATGTTCCGCATaGTCCGAGGTACTGGGCGCA +
Preference number: 4 (lower is better)
Translates to: NQSKYSSVFKFLSTMSQSTTCSA*SEVLGA
Trigger: TGCGCCCAGTACCTCGGATCATGCGGAACATGTTGT...GCTCTGGGACATTGTGCTCAGGAATTTGAAAACGCTGCTATACTTACTCTGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345093.9
ENST00000615206.4
CDS-3UTR TCA 90 bp GGAAAATGGATGGAGGTGGGGGCTTTCCCACCCAGACTGATAATTTATAGACATTCACAGTCGCTGAGGTaGGACATGAGGTTGTCAAGC +
Preference number: 4 (lower is better)
Translates to: GKWMEVGAFPPRLIIYRHSQSLR*DMRLSS
Trigger: GCTTGACAACCTCATGTCTCACCTCAGCGACTGTGA...ATGTCTATAAATTATCAGTCTGGGTGGGAAAGCCCCCACCTCCATCCATTTTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
CDS-3UTR TCA 90 bp AGGAGTAGCTTCTTGCTAAACACATCAACCCCCAACAGATTAACCCCTACCCTATCACAGTCGCTGAGGTaGGACATGAGGTTGTCAAGC +
Preference number: 4 (lower is better)
Translates to: RSSFLLNTSTPNRLTPTLSQSLR*DMRLSS
Trigger: GCTTGACAACCTCATGTCTCACCTCAGCGACTGTGA...TAGGGTAGGGGTTAATCTGTTGGGGGTTGATGTGTTTAGCAAGAAGCTACTCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
CDS-3UTR TCA 90 bp AGAGGGACGATTAGAGATTCCTTCCTCTGTCCTGATCCTCCAGGGAAATTGAATGTGTTTGTGTTCAGCTaGCGTCTTCTCCAGCTCTGC +
Preference number: 4 (lower is better)
Translates to: RGTIRDSFLCPDPPGKLNVFVFS*RLLQLC
Trigger: GCAGAGCTGGAGAAGACGTCAGCTGAACACAAACAC...ATTCAATTTCCCTGGAGGATCAGGACAGAGGAAGGAATCTCTAATCGTCCCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
CDS-3UTR TCA 90 bp GGGAAAAGCACTGCTAATGTCACTAGGATACATACATTGCCTCTTATGCTCTATCCACCAGGGAGCGCTTaGTTACAGCCTGGAGCACAG +
Preference number: 4 (lower is better)
Translates to: GKSTANVTRIHTLPLMLYPPGSA*LQPGAQ
Trigger: CTGTGCTCCAGGCTGTAATCAAGCGCTCCCTGGTGG...ATAGAGCATAAGAGGCAATGTATGTATCCTAGTGACATTAGCAGTGCTTTTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345093.9
ENST00000615206.4
CDS-3UTR TCA 90 bp ATTTCTTCAGGATGTCTGCTGCTTAGAGTCAACAGGCCTGACTGCTCTGATTCCCATGCGCAAATATCATaGCAAGGCCTGGCTCTTGCA +
Preference number: 4 (lower is better)
Translates to: ISSGCLLLRVNRPDCSDSHAQIS*QGLALA
Trigger: TGCAAGAGCCAGGCCTTGTCATGATATTTGCGCATG...GGAATCAGAGCAGTCAGGCCTGTTGACTCTAAGCAGCAGACATCCTGAAGAAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
CDS-3UTR TCA 90 bp AAGGTGAGAGAAAGGCAAAAGCAGAGGGGAAACCTTCTCAAGAAAGGGAGTAATCCTAAGGGCCATCAGTaGTGGCCAATTAACGGCCTC +
Preference number: 4 (lower is better)
Translates to: KVRERQKQRGNLLKKGSNPKGHQ*WPINGL
Trigger: GAGGCCGTTAATTGGCCATCACTGATGGCCCTTAGG...ATTACTCCCTTTCTTGAGAAGGTTTCCCCTCTGCTTTTGCCTTTCTCTCACCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345093.9
ENST00000615206.4
CDS-3UTR TCA 90 bp TCAGCCGAGGACTCCCTTGGCTCTTCCTATATTAAAGCCAAAGGTTGTGCTGAAATACCCCAGGTAACCTaGAATGGAACTGAAGTCCCC +
Preference number: 4 (lower is better)
Translates to: SAEDSLGSSYIKAKGCAEIPQVT*NGTEVP
Trigger: GGGGACTTCAGTTCCATTTCAGGTTACCTGGGGTAT...TTCAGCACAACCTTTGGCTTTAATATAGGAAGAGCCAAGGGAGTCCTCGGCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345093.9
ENST00000615206.4
CDS-3UTR TCA 90 bp ATTTCTTCAGGATGTCTGCTGCTTAGAGTCAACAGGCCTGACTGCTCTGATTCCAAGGACAGGACAGTATaGGCCTTGGTTAAGGCAGGT +
Preference number: 4 (lower is better)
Translates to: ISSGCLLLRVNRPDCSDSKDRTV*ALVKAG
Trigger: ACCTGCCTTAACCAAGGCTCATACTGTCCTGTCCTT...GGAATCAGAGCAGTCAGGCCTGTTGACTCTAAGCAGCAGACATCCTGAAGAAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345093.9
ENST00000615206.4
CDS-3UTR GCA 90 bp GCAATCTGCAGCTTTGACAACATGTTCCGCATGATCCGAGGTACTGGGCGCAGATTGTCACAGGCAATCTaGAGCTTTGACAACATGTTC +
Preference number: 4 (lower is better)
Translates to: AICSFDNMFRMIRGTGRRLSQAI*SFDNMF
Trigger: GAACATGTTGTCAAAGCTGCAGATTGCCTGTGACAA...TCTGCGCCCAGTACCTCGGATCATGCGGAACATGTTGTCAAAGCTGCAGATTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549119.1
CDS-3UTR GCA 90 bp GGGAAAAGCACTGCTAATGTCACTAGGATACATACATTGCCTCTTATGCTCTATGCGATGCGTGTCTGCTaGTGCTGTACCACTGAGCGC +
Preference number: 4 (lower is better)
Translates to: GKSTANVTRIHTLPLMLYAMRVC*CCTTER
Trigger: GCGCTCAGTGGTACAGCAGCAGCAGACACGCATCGC...ATAGAGCATAAGAGGCAATGTATGTATCCTAGTGACATTAGCAGTGCTTTTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345093.9
ENST00000615206.4
CDS-3UTR GCA 90 bp AAGGTGAGAGAAAGGCAAAAGCAGAGGGGAAACCTTCTCAAGAAAGGGAGTAATTCTGCGATGCGTGTCTaGTGCTGCTGTACCACTGAG +
Preference number: 4 (lower is better)
Translates to: KVRERQKQRGNLLKKGSNSAMRV*CCCTTE
Trigger: CTCAGTGGTACAGCAGCAGCAGACACGCATCGCAGA...ATTACTCCCTTTCTTGAGAAGGTTTCCCCTCTGCTTTTGCCTTTCTCTCACCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345093.9
ENST00000615206.4
CDS-3UTR GCA 90 bp AGAGGGACGATTAGAGATTCCTTCCTCTGTCCTGATCCTCCAGGGAAATTGAATATGTCATCCCCCATGTaGTGGTTCTCACAGGCCATC +
Preference number: 4 (lower is better)
Translates to: RGTIRDSFLCPDPPGKLNMSSPM*WFSQAI
Trigger: GATGGCCTGTGAGAACCAGCACATGGGGGATGACAT...ATTCAATTTCCCTGGAGGATCAGGACAGAGGAAGGAATCTCTAATCGTCCCTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
CDS-3UTR GCA 90 bp AGCACACAGTTCAGATCACTAGAGAGCTTTGGCTGCTACAGAACAGGAGATAGGGTCAACAGGCCTGACTaGTCTGATTCCCTGGTTTTG +
Preference number: 4 (lower is better)
Translates to: STQFRSLESFGCYRTGDRVNRPD*SDSLVL
Trigger: CAAAACCAGGGAATCAGAGCAGTCAGGCCTGTTGAC...CCTATCTCCTGTTCTGTAGCAGCCAAAGCTCTCTAGTGATCTGAACTGTGTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345093.9
ENST00000615206.4
CDS-3UTR GCA 90 bp GCCACAAGAGGCAGTGCCAACCATATTTTAGCAAAAGCTAGGAGTAGCTTCTTGGCTGAACAGGGATACTaGTTGGCACAGAGGTCCAGT +
Preference number: 4 (lower is better)
Translates to: ATRGSANHILAKARSSFLAEQGY*LAQRSS
Trigger: ACTGGACCTCTGTGCCAAGCAGTATCCCTGTTCAGC...CAAGAAGCTACTCCTAGCTTTTGCTAAAATATGGTTGGCACTGCCTCTTGTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
CDS-3UTR GCA 90 bp CATCTGGAAATTTTCAGTATCCCAACCTGCATACTGGTAGACCCAGTGGGTGCCTTCAGTATCCCAACCTaGATACTGGTAGACCCAGTG +
Preference number: 4 (lower is better)
Translates to: HLEIFSIPTCILVDPVGAFSIPT*ILVDPV
Trigger: CACTGGGTCTACCAGTATGCAGGTTGGGATACTGAA...GGCACCCACTGGGTCTACCAGTATGCAGGTTGGGATACTGAAAATTTCCAGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
CDS-3UTR GCA 90 bp GTAAGTTCAGCCGAGGACTCCCTTGGCTCTTCCTATATTAAAGCCAAAGGTTGTCCAACTACCCAGACCTaGAGCAAGCTAGCCTGGAAT +
Preference number: 4 (lower is better)
Translates to: VSSAEDSLGSSYIKAKGCPTTQT*SKLAWN
Trigger: ATTCCAGGCTAGCTTGCTGCAGGTCTGGGTAGTTGG...ACAACCTTTGGCTTTAATATAGGAAGAGCCAAGGGAGTCCTCGGCTGAACTTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345093.9
ENST00000615206.4
CDS-3UTR GCA 90 bp CTGGAAATTTTCAGTATCCCAACCTGCATACTGGTAGACCCAGTGGGTGCCTACAAAGCAGCTGTGAAGTaGACACTACTCCCAGACATC +
Preference number: 4 (lower is better)
Translates to: LEIFSIPTCILVDPVGAYKAAVK*TLLPDI
Trigger: GATGTCTGGGAGTAGTGTGCACTTCACAGCTGCTTT...GTAGGCACCCACTGGGTCTACCAGTATGCAGGTTGGGATACTGAAAATTTCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345093.9
ENST00000615206.4
CDS-3UTR GCA 90 bp CATCTGGAAATTTTCAGTATCCCAACCTGCATACTGGTAGACCCAGTGGGTGCCACTCCTCGCCAGTGCTaGTCCCTTCTCACATTTTTA +
Preference number: 4 (lower is better)
Translates to: HLEIFSIPTCILVDPVGATPRQC*SLLTFL
Trigger: TAAAAATGTGAGAAGGGAGCAGCACTGGCGAGGAGT...GGCACCCACTGGGTCTACCAGTATGCAGGTTGGGATACTGAAAATTTCCAGATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000615206.4
CDS-3UTR CCA 90 bp AAATGGATGGAGGTGGGGGCTTTCCCACCCAGACTGATAATTTATAGACATTTTGGTCCTTCCAAGTGTTaGGGGGCAGGTTCCCTGTTC +
Preference number: 4 (lower is better)
Translates to: KWMEVGAFPPRLIIYRHFGPSKC*GAGSLF
Trigger: GAACAGGGAACCTGCCCCCCAACACTTGGAAGGACC...AAAATGTCTATAAATTATCAGTCTGGGTGGGAAAGCCCCCACCTCCATCCATTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
CDS-3UTR CCA 90 bp GGCAGTGCCAACCATATTTTAGCAAAAGCTAGGAGTAGCTTCTTGCTAAACACAGGTCCTTCCAAGTGTTaGGGGGCAGGTTCCCTGTTC +
Preference number: 4 (lower is better)
Translates to: GSANHILAKARSSFLLNTGPSKC*GAGSLF
Trigger: GAACAGGGAACCTGCCCCCCAACACTTGGAAGGACC...TGTGTTTAGCAAGAAGCTACTCCTAGCTTTTGCTAAAATATGGTTGGCACTGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
CDS-3UTR CCA 90 bp CTGGAAATTTTCAGTATCCCAACCTGCATACTGGTAGACCCAGTGGGTGCCTACTCGTCAACATCCCCCTaGAAACGGGTTACATCATAC +
Preference number: 4 (lower is better)
Translates to: LEIFSIPTCILVDPVGAYSSTSP*KRVTSY
Trigger: GTATGATGTAACCCGTTTCCAGGGGGATGTTGACGA...GTAGGCACCCACTGGGTCTACCAGTATGCAGGTTGGGATACTGAAAATTTCCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
CDS-3UTR CCA 90 bp GCCACAAGAGGCAGTGCCAACCATATTTTAGCAAAAGCTAGGAGTAGCTTCTTGATGAGGTGCCTGTACTaGCTCCTCCAAGACTCCACT +
Preference number: 4 (lower is better)
Translates to: ATRGSANHILAKARSSFLMRCLY*LLQDST
Trigger: AGTGGAGTCTTGGAGGAGCCAGTACAGGCACCTCAT...CAAGAAGCTACTCCTAGCTTTTGCTAAAATATGGTTGGCACTGCCTCTTGTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345093.9
ENST00000615206.4
CDS-3UTR CCA 90 bp GGGAAGCACACAGTTCAGATCACTAGAGAGCTTTGGCTGCTACAGAACAGGAGAAACACTACGGTCCACTaGACATGTCTGTTGCTGAGA +
Preference number: 4 (lower is better)
Translates to: GKHTVQITRELWLLQNRRNTTVH*TCLLLR
Trigger: TCTCAGCAACAGACATGTCCAGTGGACCGTAGTGTT...TCTCCTGTTCTGTAGCAGCCAAAGCTCTCTAGTGATCTGAACTGTGTGCTTCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345093.9
ENST00000615206.4
CDS-3UTR CCA 90 bp GCTCATCTGGAAATTTTCAGTATCCCAACCTGCATACTGGTAGACCCAGTGGGTTATGCCTTTAGCAGCTaGATGTCTCGCTTCTGCTCC +
Preference number: 4 (lower is better)
Translates to: AHLEIFSIPTCILVDPVGYAFSS*MSRFCS
Trigger: GGAGCAGAAGCGAGACATCCAGCTGCTAAAGGCATA...ACCCACTGGGTCTACCAGTATGCAGGTTGGGATACTGAAAATTTCCAGATGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
CDS-3UTR CCA 90 bp TCCCTAAGGGCCATCAGTGATGGCCAATTAACGGCCTCACTACTTATTTCTAGACGCTTGATTACAGCCTaGAGCACAGCATCAGGAGTC +
Preference number: 4 (lower is better)
Translates to: SLRAISDGQLTASLLISRRLITA*STASGV
Trigger: GACTCCTGATGCTGTGCTCCAGGCTGTAATCAAGCG...TCTAGAAATAAGTAGTGAGGCCGTTAATTGGCCATCACTGATGGCCCTTAGGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
CDS-3UTR CCA 90 bp GGGGGAAAAGCACTGCTAATGTCACTAGGATACATACATTGCCTCTTATGCTCTGGCCAGCTACGCTCGTaGGCATTTTCAATCAGCTCG +
Preference number: 4 (lower is better)
Translates to: GGKALLMSLGYIHCLLCSGQLRS*AFSISS
Trigger: CGAGCTGATTGAAAATGCCCACGAGCGTAGCTGGCC...AGAGCATAAGAGGCAATGTATGTATCCTAGTGACATTAGCAGTGCTTTTCCCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000345093.9
ENST00000615206.4
CDS-3UTR CCA 90 bp AACCAGAGTAAGTATAGCAGCGTTTTCAAATTCCTGAGCACAATGTCCCAGAGCTCATCCCCCATGTGCTaGTTCTCACAGGCCATCACG +
Preference number: 4 (lower is better)
Translates to: NQSKYSSVFKFLSTMSQSSSPMC*FSQAIT
Trigger: CGTGATGGCCTGTGAGAACCAGCACATGGGGGATGA...GCTCTGGGACATTGTGCTCAGGAATTTGAAAACGCTGCTATACTTACTCTGGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000345093.9
ENST00000615206.4
CDS-3UTR CCA 90 bp AGAGGGACGATTAGAGATTCCTTCCTCTGTCCTGATCCTCCAGGGAAATTGAATACTGCTCTGATTCCCTaGTTTTGGAGGAGAGGGACG +
Preference number: 4 (lower is better)
Translates to: RGTIRDSFLCPDPPGKLNTALIP*FWRRGT
Trigger: CGTCCCTCTCCTCCAAAACCAGGGAATCAGAGCAGT...ATTCAATTTCCCTGGAGGATCAGGACAGAGGAAGGAATCTCTAATCGTCCCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
CDS-3UTR CCA 90 bp TCAGCCGAGGACTCCCTTGGCTCTTCCTATATTAAAGCCAAAGGTTGTGCTGAAGCTCCTCATTTCAGTTaGGGTTACAGAGGTTTGGGG +
Preference number: 4 (lower is better)
Translates to: SAEDSLGSSYIKAKGCAEAPHFS*GYRGLG
Trigger: CCCCAAACCTCTGTAACCCCAACTGAAATGAGGAGC...TTCAGCACAACCTTTGGCTTTAATATAGGAAGAGCCAAGGGAGTCCTCGGCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345093.9
ENST00000615206.4
CDS-3UTR CCA 90 bp CATCTGGAAATTTTCAGTATCCCAACCTGCATACTGGTAGACCCAGTGGGTGCCGAAGCCATTACATGGTaGGGAGGAGCCTTTCTATCT +
Preference number: 4 (lower is better)
Translates to: HLEIFSIPTCILVDPVGAEAITW*GGAFLS
Trigger: AGATAGAAAGGCTCCTCCCCACCATGTAATGGCTTC...GGCACCCACTGGGTCTACCAGTATGCAGGTTGGGATACTGAAAATTTCCAGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345093.9
ENST00000615206.4
CDS-3UTR CCA 90 bp AGCACACAGTTCAGATCACTAGAGAGCTTTGGCTGCTACAGAACAGGAGATAGGGAGGAAGCCATTACATaGTGGGGAGGAGCCTTTCTA +
Preference number: 4 (lower is better)
Translates to: STQFRSLESFGCYRTGDREEAIT*WGGAFL
Trigger: TAGAAAGGCTCCTCCCCACCATGTAATGGCTTCCTC...CCTATCTCCTGTTCTGTAGCAGCCAAAGCTCTCTAGTGATCTGAACTGTGTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345093.9
ENST00000615206.4
CDS-3UTR CCA 90 bp AGGTCCAGTCTTTCCCTAAGGGCCATCAGTGATGGCCAATTAACGGCCTCACTATTAGCTAGGAAACACTaGGAGGTAGAGACTTCTCTG +
Preference number: 4 (lower is better)
Translates to: RSSLSLRAISDGQLTASLLARKH*EVETSL
Trigger: CAGAGAAGTCTCTACCTCCCAGTGTTTCCTAGCTAA...TAGTGAGGCCGTTAATTGGCCATCACTGATGGCCCTTAGGGAAAGACTGGACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345093.9
ENST00000615206.4
CDS-3UTR CCA 90 bp AAACACATCAACCCCCAACAGATTAACCCCTACCCTAAACCCTGGCATTCCCTAAAAGCTGGTCTGTACTaGCTCCTCCAAGACTCCACT +
Preference number: 4 (lower is better)
Translates to: KHINPQQINPYPKPWHSLKAGLY*LLQDST
Trigger: AGTGGAGTCTTGGAGGAGCCAGTACAGACCAGCTTT...TAGGGAATGCCAGGGTTTAGGGTAGGGGTTAATCTGTTGGGGGTTGATGTGTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000394013.6
ENST00000547967.5
CDS-3UTR CCA 90 bp TCTGGAAATTTTCAGTATCCCAACCTGCATACTGGTAGACCCAGTGGGTGCCTAGGCTGTATCAAAAGCTaGTCTGTACTGGCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: SGNFQYPNLHTGRPSGCLGCIKS*SVLAPP
Trigger: TGGAGGAGCCAGTACAGACCAGCTTTTGATACAGCC...TAGGCACCCACTGGGTCTACCAGTATGCAGGTTGGGATACTGAAAATTTCCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394013.6
ENST00000547967.5
CDS-3UTR CCA 90 bp TCATCTGGAAATTTTCAGTATCCCAACCTGCATACTGGTAGACCCAGTGGGTGCGGCTGTATCAAAAGCTaGTCTGTACTGGCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: SSGNFQYPNLHTGRPSGCGCIKS*SVLAPP
Trigger: TGGAGGAGCCAGTACAGACCAGCTTTTGATACAGCC...GCACCCACTGGGTCTACCAGTATGCAGGTTGGGATACTGAAAATTTCCAGATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394013.6
ENST00000547967.5
CDS-3UTR CCA 90 bp TCTGGAAATTTTCAGTATCCCAACCTGCATACTGGTAGACCCAGTGGGTGCCTACTGGTCTGGCAAGGCTaGCAGAGAAATGACCTATTG +
Preference number: 4 (lower is better)
Translates to: SGNFQYPNLHTGRPSGCLLVWQG*QRNDLL
Trigger: CAATAGGTCATTTCTCTGCCAGCCTTGCCAGACCAG...TAGGCACCCACTGGGTCTACCAGTATGCAGGTTGGGATACTGAAAATTTCCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394013.6
ENST00000547967.5
CDS-3UTR TCA 90 bp TGGATGGAGGTGGGGGCTTTCCCACCCAGACTGATAATTTATAGACATTTTAGGTGGCTATTCTCCGACTaGGTATTCCTTCCCAGTGAC +
Preference number: 4 (lower is better)
Translates to: WMEVGAFPPRLIIYRHFRWLFSD*VFLPSD
Trigger: GTCACTGGGAAGGAATACTCAGTCGGAGAATAGCCA...CCTAAAATGTCTATAAATTATCAGTCTGGGTGGGAAAGCCCCCACCTCCATCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
CDS-3UTR TCA 90 bp ATTTCTTCAGGATGTCTGCTGCTTAGAGTCAACAGGCCTGACTGCTCTGATTCCGGCAATCTGCAGCTTTaGCAACATGTTCCGCATGAT +
Preference number: 4 (lower is better)
Translates to: ISSGCLLLRVNRPDCSDSGNLQL*QHVPHD
Trigger: ATCATGCGGAACATGTTGTCAAAGCTGCAGATTGCC...GGAATCAGAGCAGTCAGGCCTGTTGACTCTAAGCAGCAGACATCCTGAAGAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
CDS-3UTR TCA 90 bp ACAAGAGGCAGTGCCAACCATATTTTAGCAAAAGCTAGGAGTAGCTTCTTGCTACTGCTGCTGTACCACTaGGCGCAGGTGCTTAATGCA +
Preference number: 4 (lower is better)
Translates to: TRGSANHILAKARSSFLLLLLYH*AQVLNA
Trigger: TGCATTAAGCACCTGCGCTCAGTGGTACAGCAGCAG...TAGCAAGAAGCTACTCCTAGCTTTTGCTAAAATATGGTTGGCACTGCCTCTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
CDS-3UTR TCA 90 bp GTAAGTTCAGCCGAGGACTCCCTTGGCTCTTCCTATATTAAAGCCAAAGGTTGTTCCCAGCTGCTGGAGTaGTGGGATTTTCTGATTTCC +
Preference number: 4 (lower is better)
Translates to: VSSAEDSLGSSYIKAKGCSQLLE*WDFLIS
Trigger: GGAAATCAGAAAATCCCATCACTCCAGCAGCTGGGA...ACAACCTTTGGCTTTAATATAGGAAGAGCCAAGGGAGTCCTCGGCTGAACTTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345093.9
ENST00000615206.4
CDS-3UTR TCA 90 bp TTCGCTTGTTTTTGCTGCATTTTAGAGATCACTTTCCTGGACTTGCACTCTGCCACCTTTAAGGTGGGCTaGACAGGGATACTGCTTGGC +
Preference number: 4 (lower is better)
Translates to: FACFCCILEITFLDLHSATFKVG*TGILLG
Trigger: GCCAAGCAGTATCCCTGTTCAGCCCACCTTAAAGGT...GGCAGAGTGCAAGTCCAGGAAAGTGATCTCTAAAATGCAGCAAAAACAAGCGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000547967.5
CDS-3UTR TCA 90 bp GGAAAATGGATGGAGGTGGGGGCTTTCCCACCCAGACTGATAATTTATAGACATATACCCCAGGTAACCTaGAATGGAACTGAAGTCCCC +
Preference number: 4 (lower is better)
Translates to: GKWMEVGAFPPRLIIYRHIPQVT*NGTEVP
Trigger: GGGGACTTCAGTTCCATTTCAGGTTACCTGGGGTAT...ATGTCTATAAATTATCAGTCTGGGTGGGAAAGCCCCCACCTCCATCCATTTTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000345093.9
ENST00000615206.4
CDS-3UTR TCA 90 bp TCCCTAAGGGCCATCAGTGATGGCCAATTAACGGCCTCACTACTTATTTCTAGAAAGGACAGGACAGTATaGGCCTTGGTTAAGGCAGGT +
Preference number: 4 (lower is better)
Translates to: SLRAISDGQLTASLLISRKDRTV*ALVKAG
Trigger: ACCTGCCTTAACCAAGGCTCATACTGTCCTGTCCTT...TCTAGAAATAAGTAGTGAGGCCGTTAATTGGCCATCACTGATGGCCCTTAGGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345093.9
ENST00000615206.4
CDS-3UTR TCA 90 bp AACCAGAGTAAGTATAGCAGCGTTTTCAAATTCCTGAGCACAATGTCCCAGAGCGCACTCCAGTCTGGGTaGCAGTGTTCTTTCTACTCC +
Preference number: 4 (lower is better)
Translates to: NQSKYSSVFKFLSTMSQSALQSG*QCSFYS
Trigger: GGAGTAGAAAGAACACTGTCACCCAGACTGGAGTGC...GCTCTGGGACATTGTGCTCAGGAATTTGAAAACGCTGCTATACTTACTCTGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000345093.9
CDS-3UTR TCA 90 bp CGCTCGTGGGCATTTTCAATCAGCTCGTTGACAATAGAAGCAGGACAGCCACTCAGAGAAATGACCTATTaGAGGTGGCAGCTTTCACAT +
Preference number: 4 (lower is better)
Translates to: RSWAFSISSLTIEAGQPLREMTY*RWQLSH
Trigger: ATGTGAAAGCTGCCACCTTCAATAGGTCATTTCTCT...GAGTGGCTGTCCTGCTTCTATTGTCAACGAGCTGATTGAAAATGCCCACGAGCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547967.5
CDS-3UTR GCA 90 bp AGGTCCAGTCTTTCCCTAAGGGCCATCAGTGATGGCCAATTAACGGCCTCACTATTGTCACAGGCAATCTaGAGCTTTGACAACATGTTC +
Preference number: 4 (lower is better)
Translates to: RSSLSLRAISDGQLTASLLSQAI*SFDNMF
Trigger: GAACATGTTGTCAAAGCTGCAGATTGCCTGTGACAA...TAGTGAGGCCGTTAATTGGCCATCACTGATGGCCCTTAGGGAAAGACTGGACCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
CDS-3UTR GCA 90 bp ATAAACATACCTTGTGTGCATAGAAGCGCAGACTCAGCACAGAAATGCCTTTTTCGTCTTCTCCAGCTCTaGGATGCGTGTCTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: INIPCVHRSADSAQKCLFRLLQL*DACLLL
Trigger: CAGCAGCAGACACGCATCGCAGAGCTGGAGAAGACG...AAAAAGGCATTTCTGTGCTGAGTCTGCGCTTCTATGCACACAAGGTATGTTTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000345093.9
ENST00000615206.4
CDS-3UTR GCA 90 bp TCCCTAAGGGCCATCAGTGATGGCCAATTAACGGCCTCACTACTTATTTCTAGAGTCAACAGGCCTGACTaGTCTGATTCCCTGGTTTTG +
Preference number: 4 (lower is better)
Translates to: SLRAISDGQLTASLLISRVNRPD*SDSLVL
Trigger: CAAAACCAGGGAATCAGAGCAGTCAGGCCTGTTGAC...TCTAGAAATAAGTAGTGAGGCCGTTAATTGGCCATCACTGATGGCCCTTAGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
CDS-3UTR GCA 90 bp TCCCTAAGGGCCATCAGTGATGGCCAATTAACGGCCTCACTACTTATTTCTAGACTTCAGGATGTCTGCTaGTTAGAGTCAACAGGCCTG +
Preference number: 4 (lower is better)
Translates to: SLRAISDGQLTASLLISRLQDVC*LESTGL
Trigger: CAGGCCTGTTGACTCTAAGCAGCAGACATCCTGAAG...TCTAGAAATAAGTAGTGAGGCCGTTAATTGGCCATCACTGATGGCCCTTAGGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
CDS-3UTR GCA 90 bp AGAGGGACGATTAGAGATTCCTTCCTCTGTCCTGATCCTCCAGGGAAATTGAATCTTCAGGATGTCTGCTaGTTAGAGTCAACAGGCCTG +
Preference number: 4 (lower is better)
Translates to: RGTIRDSFLCPDPPGKLNLQDVC*LESTGL
Trigger: CAGGCCTGTTGACTCTAAGCAGCAGACATCCTGAAG...ATTCAATTTCCCTGGAGGATCAGGACAGAGGAAGGAATCTCTAATCGTCCCTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
CDS-3UTR GCA 90 bp GGAAAATGGATGGAGGTGGGGGCTTTCCCACCCAGACTGATAATTTATAGACATCTTCAGGATGTCTGCTaGTTAGAGTCAACAGGCCTG +
Preference number: 4 (lower is better)
Translates to: GKWMEVGAFPPRLIIYRHLQDVC*LESTGL
Trigger: CAGGCCTGTTGACTCTAAGCAGCAGACATCCTGAAG...ATGTCTATAAATTATCAGTCTGGGTGGGAAAGCCCCCACCTCCATCCATTTTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
CDS-3UTR GCA 90 bp TCTGGAAATTTTCAGTATCCCAACCTGCATACTGGTAGACCCAGTGGGTGCCTACTAGAGAGCTTTGGCTaGTACAGAACAGGAGATAGG +
Preference number: 4 (lower is better)
Translates to: SGNFQYPNLHTGRPSGCLLESFG*YRTGDR
Trigger: CCTATCTCCTGTTCTGTAGCAGCCAAAGCTCTCTAG...TAGGCACCCACTGGGTCTACCAGTATGCAGGTTGGGATACTGAAAATTTCCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345093.9
ENST00000615206.4
CDS-3UTR GCA 90 bp AAACACATCAACCCCCAACAGATTAACCCCTACCCTAAACCCTGGCATTCCCTATTCAAGCGATTCTTGTaGCTTAGCCTTCCAAGGAGC +
Preference number: 4 (lower is better)
Translates to: KHINPQQINPYPKPWHSLFKRFL*LSLPRS
Trigger: GCTCCTTGGAAGGCTAAGGCACAAGAATCGCTTGAA...TAGGGAATGCCAGGGTTTAGGGTAGGGGTTAATCTGTTGGGGGTTGATGTGTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000345093.9
ENST00000615206.4
CDS-3UTR GCA 90 bp GGCAGTGCCAACCATATTTTAGCAAAAGCTAGGAGTAGCTTCTTGCTAAACACAGTCACCAGGCTGGAGTaGAGTGGCATGATCTCAGCT +
Preference number: 4 (lower is better)
Translates to: GSANHILAKARSSFLLNTVTRLE*SGMISA
Trigger: AGCTGAGATCATGCCACTGCACTCCAGCCTGGTGAC...TGTGTTTAGCAAGAAGCTACTCCTAGCTTTTGCTAAAATATGGTTGGCACTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345093.9
ENST00000615206.4
CDS-3UTR CCA 90 bp AAGGTGAGAGAAAGGCAAAAGCAGAGGGGAAACCTTCTCAAGAAAGGGAGTAATATGAGGTGCCTGTACTaGCTCCTCCAAGACTCCACT +
Preference number: 4 (lower is better)
Translates to: KVRERQKQRGNLLKKGSNMRCLY*LLQDST
Trigger: AGTGGAGTCTTGGAGGAGCCAGTACAGGCACCTCAT...ATTACTCCCTTTCTTGAGAAGGTTTCCCCTCTGCTTTTGCCTTTCTCTCACCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345093.9
ENST00000615206.4
CDS-3UTR CCA 90 bp AAACTTGTAGGAAAGAAGAGCTCATCTGGAAATTTTCAGTATCCCAACCTGCATCATGATCCGAGGTACTaGGCGCAGATGGGCGACCGT +
Preference number: 4 (lower is better)
Translates to: KLVGKKSSSGNFQYPNLHHDPRY*AQMGDR
Trigger: ACGGTCGCCCATCTGCGCCCAGTACCTCGGATCATG...ATGCAGGTTGGGATACTGAAAATTTCCAGATGAGCTCTTCTTTCCTACAAGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
CDS-3UTR CCA 90 bp AGGAGTAGCTTCTTGCTAAACACATCAACCCCCAACAGATTAACCCCTACCCTATATGCCTTTAGCAGCTaGATGTCTCGCTTCTGCTCC +
Preference number: 4 (lower is better)
Translates to: RSSFLLNTSTPNRLTPTLYAFSS*MSRFCS
Trigger: GGAGCAGAAGCGAGACATCCAGCTGCTAAAGGCATA...TAGGGTAGGGGTTAATCTGTTGGGGGTTGATGTGTTTAGCAAGAAGCTACTCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
CDS-3UTR CCA 90 bp AAATGGATGGAGGTGGGGGCTTTCCCACCCAGACTGATAATTTATAGACATTTTTCATCCCCCATGTGCTaGTTCTCACAGGCCATCACG +
Preference number: 4 (lower is better)
Translates to: KWMEVGAFPPRLIIYRHFSSPMC*FSQAIT
Trigger: CGTGATGGCCTGTGAGAACCAGCACATGGGGGATGA...AAAATGTCTATAAATTATCAGTCTGGGTGGGAAAGCCCCCACCTCCATCCATTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
CDS-3UTR CCA 90 bp GGCAGTGCCAACCATATTTTAGCAAAAGCTAGGAGTAGCTTCTTGCTAAACACAGGGCAGGGAGATGTGTaGCTCAGGTATAAGCCACAG +
Preference number: 4 (lower is better)
Translates to: GSANHILAKARSSFLLNTGQGDV*LRYKPQ
Trigger: CTGTGGCTTATACCTGAGCCACACATCTCCCTGCCC...TGTGTTTAGCAAGAAGCTACTCCTAGCTTTTGCTAAAATATGGTTGGCACTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
CDS-3UTR CCA 90 bp ACAAGAGGCAGTGCCAACCATATTTTAGCAAAAGCTAGGAGTAGCTTCTTGCTAGGGCAGGGAGATGTGTaGCTCAGGTATAAGCCACAG +
Preference number: 4 (lower is better)
Translates to: TRGSANHILAKARSSFLLGQGDV*LRYKPQ
Trigger: CTGTGGCTTATACCTGAGCCACACATCTCCCTGCCC...TAGCAAGAAGCTACTCCTAGCTTTTGCTAAAATATGGTTGGCACTGCCTCTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
CDS-3UTR CCA 90 bp GGCAGTGCCAACCATATTTTAGCAAAAGCTAGGAGTAGCTTCTTGCTAAACACAGAAAATGGATGGAGGTaGGGGCTTTCCCACCCAGAC +
Preference number: 4 (lower is better)
Translates to: GSANHILAKARSSFLLNTENGWR*GLSHPD
Trigger: GTCTGGGTGGGAAAGCCCCCACCTCCATCCATTTTC...TGTGTTTAGCAAGAAGCTACTCCTAGCTTTTGCTAAAATATGGTTGGCACTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
CDS-3UTR CCA 90 bp TTCGCTTGTTTTTGCTGCATTTTAGAGATCACTTTCCTGGACTTGCACTCTGCCAAGCAGGAAAATGGATaGAGGTGGGGGCTTTCCCAC +
Preference number: 4 (lower is better)
Translates to: FACFCCILEITFLDLHSAKQENG*RWGLSH
Trigger: GTGGGAAAGCCCCCACCTCCATCCATTTTCCTGCTT...GGCAGAGTGCAAGTCCAGGAAAGTGATCTCTAAAATGCAGCAAAAACAAGCGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000547967.5
CDS-3UTR CCA 90 bp AACCAGAGTAAGTATAGCAGCGTTTTCAAATTCCTGAGCACAATGTCCCAGAGCAAGCAGGAAAATGGATaGAGGTGGGGGCTTTCCCAC +
Preference number: 4 (lower is better)
Translates to: NQSKYSSVFKFLSTMSQSKQENG*RWGLSH
Trigger: GTGGGAAAGCCCCCACCTCCATCCATTTTCCTGCTT...GCTCTGGGACATTGTGCTCAGGAATTTGAAAACGCTGCTATACTTACTCTGGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000345093.9
ENST00000615206.4
CDS-3UTR CCA 90 bp ATTTCTTCAGGATGTCTGCTGCTTAGAGTCAACAGGCCTGACTGCTCTGATTCCCTGATTCCCTGGTTTTaGAGGAGAGGGACGATTAGA +
Preference number: 4 (lower is better)
Translates to: ISSGCLLLRVNRPDCSDSLIPWF*RRGTIR
Trigger: TCTAATCGTCCCTCTCCTCCAAAACCAGGGAATCAG...GGAATCAGAGCAGTCAGGCCTGTTGACTCTAAGCAGCAGACATCCTGAAGAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
CDS-3UTR CCA 90 bp AAACACATCAACCCCCAACAGATTAACCCCTACCCTAAACCCTGGCATTCCCTACTGATTCCCTGGTTTTaGAGGAGAGGGACGATTAGA +
Preference number: 4 (lower is better)
Translates to: KHINPQQINPYPKPWHSLLIPWF*RRGTIR
Trigger: TCTAATCGTCCCTCTCCTCCAAAACCAGGGAATCAG...TAGGGAATGCCAGGGTTTAGGGTAGGGGTTAATCTGTTGGGGGTTGATGTGTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
CDS-3UTR CCA 90 bp GCTCATCTGGAAATTTTCAGTATCCCAACCTGCATACTGGTAGACCCAGTGGGTCTGATTCCCTGGTTTTaGAGGAGAGGGACGATTAGA +
Preference number: 4 (lower is better)
Translates to: AHLEIFSIPTCILVDPVGLIPWF*RRGTIR
Trigger: TCTAATCGTCCCTCTCCTCCAAAACCAGGGAATCAG...ACCCACTGGGTCTACCAGTATGCAGGTTGGGATACTGAAAATTTCCAGATGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
CDS-3UTR CCA 90 bp ACACCTTTAAGGTGGGCTGAACAGGGATACTGCTTGGCACAGAGGTCCAGTCTTCCCTACCCTAAACCCTaGCATTCCCTAATTATGAAA +
Preference number: 4 (lower is better)
Translates to: TPLRWAEQGYCLAQRSSLPYPKP*HSLIMK
Trigger: TTTCATAATTAGGGAATGCCAGGGTTTAGGGTAGGG...AAGACTGGACCTCTGTGCCAAGCAGTATCCCTGTTCAGCCCACCTTAAAGGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
CDS-3UTR CCA 90 bp GACATGGAATTTAGGATAAAGGCAGACCCTGGGAAGCACACAGTTCAGATCACTGAGGAAGCCATTACATaGTGGGGAGGAGCCTTTCTA +
Preference number: 4 (lower is better)
Translates to: DMEFRIKADPGKHTVQITEEAIT*WGGAFL
Trigger: TAGAAAGGCTCCTCCCCACCATGTAATGGCTTCCTC...AGTGATCTGAACTGTGTGCTTCCCAGGGTCTGCCTTTATCCTAAATTCCATGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345093.9
ENST00000615206.4
CDS-3UTR CCA 90 bp GGGGGAAAAGCACTGCTAATGTCACTAGGATACATACATTGCCTCTTATGCTCTACAATGTCCCAGAGCTaGAACCCTACTCCCCTCAAG +
Preference number: 4 (lower is better)
Translates to: GGKALLMSLGYIHCLLCSTMSQS*NPTPLK
Trigger: CTTGAGGGGAGTAGGGTTCCAGCTCTGGGACATTGT...AGAGCATAAGAGGCAATGTATGTATCCTAGTGACATTAGCAGTGCTTTTCCCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000345093.9
ENST00000615206.4
CDS-3UTR CCA 90 bp CGCTCGTGGGCATTTTCAATCAGCTCGTTGACAATAGAAGCAGGACAGCCACTCAAAATGCAGAGTGCATaGCTGTATCAAAAGCTGGTC +
Preference number: 4 (lower is better)
Translates to: RSWAFSISSLTIEAGQPLKMQSA*LYQKLV
Trigger: GACCAGCTTTTGATACAGCCATGCACTCTGCATTTT...GAGTGGCTGTCCTGCTTCTATTGTCAACGAGCTGATTGAAAATGCCCACGAGCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000547967.5
CDS-3UTR CCA 90 bp GCCACAAGAGGCAGTGCCAACCATATTTTAGCAAAAGCTAGGAGTAGCTTCTTGCTGGTCTGGCAAGGCTaGCAGAGAAATGACCTATTG +
Preference number: 4 (lower is better)
Translates to: ATRGSANHILAKARSSFLLVWQG*QRNDLL
Trigger: CAATAGGTCATTTCTCTGCCAGCCTTGCCAGACCAG...CAAGAAGCTACTCCTAGCTTTTGCTAAAATATGGTTGGCACTGCCTCTTGTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394013.6
ENST00000547967.5
CDS-3UTR TCA 90 bp AACCAGAGTAAGTATAGCAGCGTTTTCAAATTCCTGAGCACAATGTCCCAGAGCAAAGCATGTTCACAATaGGGTGCCTGTACTGGCTCC +
Preference number: 4 (lower is better)
Translates to: NQSKYSSVFKFLSTMSQSKACSQ*GACTGS
Trigger: GGAGCCAGTACAGGCACCTCATTGTGAACATGCTTT...GCTCTGGGACATTGTGCTCAGGAATTTGAAAACGCTGCTATACTTACTCTGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345093.9
ENST00000615206.4
CDS-3UTR TCA 90 bp ACAAGAGGCAGTGCCAACCATATTTTAGCAAAAGCTAGGAGTAGCTTCTTGCTAGTGTTTGTGTTCAGCTaGCGTCTTCTCCAGCTCTGC +
Preference number: 4 (lower is better)
Translates to: TRGSANHILAKARSSFLLVFVFS*RLLQLC
Trigger: GCAGAGCTGGAGAAGACGTCAGCTGAACACAAACAC...TAGCAAGAAGCTACTCCTAGCTTTTGCTAAAATATGGTTGGCACTGCCTCTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
CDS-3UTR TCA 90 bp ATAAACATACCTTGTGTGCATAGAAGCGCAGACTCAGCACAGAAATGCCTTTTTTCTGAAGGTTGGGGTTaGCACTGCGGATTGCACGCA +
Preference number: 4 (lower is better)
Translates to: INIPCVHRSADSAQKCLFSEGWG*HCGLHA
Trigger: TGCGTGCAATCCGCAGTGTCAACCCCAACCTTCAGA...AAAAAGGCATTTCTGTGCTGAGTCTGCGCTTCTATGCACACAAGGTATGTTTAT
47% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000345093.9
ENST00000615206.4
CDS-3UTR TCA 90 bp AAACTTGTAGGAAAGAAGAGCTCATCTGGAAATTTTCAGTATCCCAACCTGCATTCCCACCTGAAAGGCTaGGCAAACTACCCCAAGGCC +
Preference number: 4 (lower is better)
Translates to: KLVGKKSSSGNFQYPNLHSHLKG*ANYPKA
Trigger: GGCCTTGGGGTAGTTTGCTCAGCCTTTCAGGTGGGA...ATGCAGGTTGGGATACTGAAAATTTCCAGATGAGCTCTTCTTTCCTACAAGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
CDS-3UTR TCA 90 bp CTGGAAATTTTCAGTATCCCAACCTGCATACTGGTAGACCCAGTGGGTGCCTACATCCTCCAGGGAAATTaGATCTCTTTGTGCTTTCTG +
Preference number: 4 (lower is better)
Translates to: LEIFSIPTCILVDPVGAYILQGN*ISLCFL
Trigger: CAGAAAGCACAAAGAGATTCAATTTCCCTGGAGGAT...GTAGGCACCCACTGGGTCTACCAGTATGCAGGTTGGGATACTGAAAATTTCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
CDS-3UTR TCA 90 bp AAATGGATGGAGGTGGGGGCTTTCCCACCCAGACTGATAATTTATAGACATTTTTGCCAACAATGTGGCTaGGATAGCCATGATCAGGCC +
Preference number: 4 (lower is better)
Translates to: KWMEVGAFPPRLIIYRHFCQQCG*DSHDQA
Trigger: GGCCTGATCATGGCTATCTCAGCCACATTGTTGGCA...AAAATGTCTATAAATTATCAGTCTGGGTGGGAAAGCCCCCACCTCCATCCATTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
CDS-3UTR TCA 90 bp TCCCTAAGGGCCATCAGTGATGGCCAATTAACGGCCTCACTACTTATTTCTAGAGCGTTTTCAAATTCCTaGGCACAATGTCCCAGAGCT +
Preference number: 4 (lower is better)
Translates to: SLRAISDGQLTASLLISRAFSNS*AQCPRA
Trigger: AGCTCTGGGACATTGTGCTCAGGAATTTGAAAACGC...TCTAGAAATAAGTAGTGAGGCCGTTAATTGGCCATCACTGATGGCCCTTAGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345093.9
ENST00000615206.4
CDS-3UTR TCA 90 bp AGAGGGACGATTAGAGATTCCTTCCTCTGTCCTGATCCTCCAGGGAAATTGAATGCGTTTTCAAATTCCTaGGCACAATGTCCCAGAGCT +
Preference number: 4 (lower is better)
Translates to: RGTIRDSFLCPDPPGKLNAFSNS*AQCPRA
Trigger: AGCTCTGGGACATTGTGCTCAGGAATTTGAAAACGC...ATTCAATTTCCCTGGAGGATCAGGACAGAGGAAGGAATCTCTAATCGTCCCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345093.9
ENST00000615206.4
CDS-3UTR TCA 90 bp ATTTCTTCAGGATGTCTGCTGCTTAGAGTCAACAGGCCTGACTGCTCTGATTCCCTGAAAAGCCTTTCCTaGTACCCATCAGAATCAGGA +
Preference number: 4 (lower is better)
Translates to: ISSGCLLLRVNRPDCSDSLKSLS*YPSESG
Trigger: TCCTGATTCTGATGGGTATCAGGAAAGGCTTTTCAG...GGAATCAGAGCAGTCAGGCCTGTTGACTCTAAGCAGCAGACATCCTGAAGAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345093.9
ENST00000615206.4
CDS-3UTR GCA 90 bp GGAAAATGGATGGAGGTGGGGGCTTTCCCACCCAGACTGATAATTTATAGACATACCACTGAGCGCAGGTaGTTAATGCAGTTATGGTTG +
Preference number: 4 (lower is better)
Translates to: GKWMEVGAFPPRLIIYRHTTERR*LMQLWL
Trigger: CAACCATAACTGCATTAAGCACCTGCGCTCAGTGGT...ATGTCTATAAATTATCAGTCTGGGTGGGAAAGCCCCCACCTCCATCCATTTTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
CDS-3UTR GCA 90 bp CAATGGCCAAAGAAAATTATCAAAGTAACTAACTACAGTCACAGGGCTAGAGAGATGCGTGTCTGCTGCTaGTGTACCACTGAGCGCAGG +
Preference number: 4 (lower is better)
Translates to: QWPKKIIKVTNYSHRAREMRVCC*CTTERR
Trigger: CCTGCGCTCAGTGGTACAGCAGCAGCAGACACGCAT...CTCTCTAGCCCTGTGACTGTAGTTAGTTACTTTGATAATTTTCTTTGGCCATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
CDS-3UTR GCA 90 bp CCAAAGAAAATTATCAAAGTAACTAACTACAGTCACAGGGCTAGAGAGGGGTCTTCTCCAGCTCTGCGATaGGTGTCTGCTGCTGCTGTA +
Preference number: 4 (lower is better)
Translates to: PKKIIKVTNYSHRAREGSSPALR*VSAAAV
Trigger: TACAGCAGCAGCAGACACGCATCGCAGAGCTGGAGA...AGACCCCTCTCTAGCCCTGTGACTGTAGTTAGTTACTTTGATAATTTTCTTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
CDS-3UTR GCA 90 bp AAACTTGTAGGAAAGAAGAGCTCATCTGGAAATTTTCAGTATCCCAACCTGCATCCAGCGGGTCACTCTTaGTGGCTGAAGGGAGTTCAC +
Preference number: 4 (lower is better)
Translates to: KLVGKKSSSGNFQYPNLHPAGHS*WLKGVH
Trigger: GTGAACTCCCTTCAGCCAGCAAGAGTGACCCGCTGG...ATGCAGGTTGGGATACTGAAAATTTCCAGATGAGCTCTTCTTTCCTACAAGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
CDS-3UTR GCA 90 bp GGCAGTGCCAACCATATTTTAGCAAAAGCTAGGAGTAGCTTCTTGCTAAACACAGACTCAGGTCCCAGCTaGTGGAGTGATGGGATTTTC +
Preference number: 4 (lower is better)
Translates to: GSANHILAKARSSFLLNTDSGPS*WSDGIF
Trigger: GAAAATCCCATCACTCCAGCAGCTGGGACCTGAGTC...TGTGTTTAGCAAGAAGCTACTCCTAGCTTTTGCTAAAATATGGTTGGCACTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
CDS-3UTR GCA 90 bp GGGGGAAAAGCACTGCTAATGTCACTAGGATACATACATTGCCTCTTATGCTCTCTTCAGGATGTCTGCTaGTTAGAGTCAACAGGCCTG +
Preference number: 4 (lower is better)
Translates to: GGKALLMSLGYIHCLLCSLQDVC*LESTGL
Trigger: CAGGCCTGTTGACTCTAAGCAGCAGACATCCTGAAG...AGAGCATAAGAGGCAATGTATGTATCCTAGTGACATTAGCAGTGCTTTTCCCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000345093.9
ENST00000615206.4
CDS-3UTR GCA 90 bp TCCCTAAGGGCCATCAGTGATGGCCAATTAACGGCCTCACTACTTATTTCTAGATTCAGTATCCCAACCTaGATACTGGTAGACCCAGTG +
Preference number: 4 (lower is better)
Translates to: SLRAISDGQLTASLLISRFSIPT*ILVDPV
Trigger: CACTGGGTCTACCAGTATGCAGGTTGGGATACTGAA...TCTAGAAATAAGTAGTGAGGCCGTTAATTGGCCATCACTGATGGCCCTTAGGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
CDS-3UTR GCA 90 bp AGGAGTAGCTTCTTGCTAAACACATCAACCCCCAACAGATTAACCCCTACCCTAAAAGCAGCTGTGAAGTaGACACTACTCCCAGACATC +
Preference number: 4 (lower is better)
Translates to: RSSFLLNTSTPNRLTPTLKAAVK*TLLPDI
Trigger: GATGTCTGGGAGTAGTGTGCACTTCACAGCTGCTTT...TAGGGTAGGGGTTAATCTGTTGGGGGTTGATGTGTTTAGCAAGAAGCTACTCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000345093.9
ENST00000615206.4
CDS-3UTR GCA 90 bp TTCCAGAGGGCACAGGCATCGATGCTGGACTGTCATATCCTTCACAGGAAGAGAAGAGACTTCTCTGCCTaGAAAGGAATTCTAGATTCT +
Preference number: 4 (lower is better)
Translates to: FQRAQASMLDCHILHRKRRDFSA*KGILDS
Trigger: AGAATCTAGAATTCCTTTGCAGGCAGAGAAGTCTCT...TCTCTTCCTGTGAAGGATATGACAGTCCAGCATCGATGCCTGTGCCCTCTGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345093.9
ENST00000615206.4
CDS-3UTR GCA 90 bp TTGGCACAGAGGTCCAGTCTTTCCCTAAGGGCCATCAGTGATGGCCAATTAACGCATCAAAATGCAGAGTaGATGGCTGTATCAAAAGCT +
Preference number: 4 (lower is better)
Translates to: LAQRSSLSLRAISDGQLTHQNAE*MAVSKA
Trigger: AGCTTTTGATACAGCCATGCACTCTGCATTTTGATG...CGTTAATTGGCCATCACTGATGGCCCTTAGGGAAAGACTGGACCTCTGTGCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394013.6
ENST00000547967.5
CDS-3UTR CCA 90 bp CAATGGCCAAAGAAAATTATCAAAGTAACTAACTACAGTCACAGGGCTAGAGAGGGTCCTTCCAAGTGTTaGGGGGCAGGTTCCCTGTTC +
Preference number: 4 (lower is better)
Translates to: QWPKKIIKVTNYSHRAREGPSKC*GAGSLF
Trigger: GAACAGGGAACCTGCCCCCCAACACTTGGAAGGACC...CTCTCTAGCCCTGTGACTGTAGTTAGTTACTTTGATAATTTTCTTTGGCCATTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
CDS-3UTR CCA 90 bp CAATGGCCAAAGAAAATTATCAAAGTAACTAACTACAGTCACAGGGCTAGAGAGTGGGCAGCTCATCTTTaGGCATCTCCAGGCCACAGC +
Preference number: 4 (lower is better)
Translates to: QWPKKIIKVTNYSHRAREWAAHL*ASPGHS
Trigger: GCTGTGGCCTGGAGATGCCCAAAGATGAGCTGCCCA...CTCTCTAGCCCTGTGACTGTAGTTAGTTACTTTGATAATTTTCTTTGGCCATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
CDS-3UTR CCA 90 bp CTGGAAATTTTCAGTATCCCAACCTGCATACTGGTAGACCCAGTGGGTGCCTACTGCTTAATGCAGTTATaGTTGGGCAGCTCATCTTTG +
Preference number: 4 (lower is better)
Translates to: LEIFSIPTCILVDPVGAYCLMQL*LGSSSL
Trigger: CAAAGATGAGCTGCCCAACCATAACTGCATTAAGCA...GTAGGCACCCACTGGGTCTACCAGTATGCAGGTTGGGATACTGAAAATTTCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
CDS-3UTR CCA 90 bp ATAAACATACCTTGTGTGCATAGAAGCGCAGACTCAGCACAGAAATGCCTTTTTGGCCAGCTACGCTCGTaGGCATTTTCAATCAGCTCG +
Preference number: 4 (lower is better)
Translates to: INIPCVHRSADSAQKCLFGQLRS*AFSISS
Trigger: CGAGCTGATTGAAAATGCCCACGAGCGTAGCTGGCC...AAAAAGGCATTTCTGTGCTGAGTCTGCGCTTCTATGCACACAAGGTATGTTTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000345093.9
ENST00000615206.4
CDS-3UTR CCA 90 bp TTTCTTCAGGATGTCTGCTGCTTAGAGTCAACAGGCCTGACTGCTCTGATTCCCCATTTTAGGGGAATATaGCAAAGGGAGGAAATCTGG +
Preference number: 4 (lower is better)
Translates to: FLQDVCCLESTGLTALIPHFRGI*QREEIW
Trigger: CCAGATTTCCTCCCTTTGCCATATTCCCCTAAAATG...GGGAATCAGAGCAGTCAGGCCTGTTGACTCTAAGCAGCAGACATCCTGAAGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
CDS-3UTR CCA 90 bp GGCAGTGCCAACCATATTTTAGCAAAAGCTAGGAGTAGCTTCTTGCTAAACACAAAGCAGGAAAATGGATaGAGGTGGGGGCTTTCCCAC +
Preference number: 4 (lower is better)
Translates to: GSANHILAKARSSFLLNTKQENG*RWGLSH
Trigger: GTGGGAAAGCCCCCACCTCCATCCATTTTCCTGCTT...TGTGTTTAGCAAGAAGCTACTCCTAGCTTTTGCTAAAATATGGTTGGCACTGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
CDS-3UTR CCA 90 bp GCCACAAGAGGCAGTGCCAACCATATTTTAGCAAAAGCTAGGAGTAGCTTCTTGGGGGTTACAGAGGTTTaGGGCAGATATCGTAAGTTC +
Preference number: 4 (lower is better)
Translates to: ATRGSANHILAKARSSFLGVTEV*GRYRKF
Trigger: GAACTTACGATATCTGCCCCAAACCTCTGTAACCCC...CAAGAAGCTACTCCTAGCTTTTGCTAAAATATGGTTGGCACTGCCTCTTGTGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000345093.9
ENST00000615206.4
CDS-3UTR CCA 90 bp GCCACAAGAGGCAGTGCCAACCATATTTTAGCAAAAGCTAGGAGTAGCTTCTTGGAAGCCATTACATGGTaGGGAGGAGCCTTTCTATCT +
Preference number: 4 (lower is better)
Translates to: ATRGSANHILAKARSSFLEAITW*GGAFLS
Trigger: AGATAGAAAGGCTCCTCCCCACCATGTAATGGCTTC...CAAGAAGCTACTCCTAGCTTTTGCTAAAATATGGTTGGCACTGCCTCTTGTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345093.9
ENST00000615206.4
CDS-3UTR CCA 90 bp ACATGGGAAAGCAGCTGTGAAGTGCACACTACTCCCAGACATCCTCCTGAAAGATGCAGCAAGCTAGCCTaGAATAAAATTCTGAGAGGA +
Preference number: 4 (lower is better)
Translates to: TWESSCEVHTTPRHPPERCSKLA*NKILRG
Trigger: TCCTCTCAGAATTTTATTCCAGGCTAGCTTGCTGCA...TCTTTCAGGAGGATGTCTGGGAGTAGTGTGCACTTCACAGCTGCTTTCCCATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345093.9
ENST00000615206.4
CDS-3UTR CCA 90 bp AAACACATCAACCCCCAACAGATTAACCCCTACCCTAAACCCTGGCATTCCCTAGTGCAGTCAACACCATaGAACAGCACATACAACACA +
Preference number: 4 (lower is better)
Translates to: KHINPQQINPYPKPWHSLVQSTP*NSTYNT
Trigger: TGTGTTGTATGTGCTGTTCCATGGTGTTGACTGCAC...TAGGGAATGCCAGGGTTTAGGGTAGGGGTTAATCTGTTGGGGGTTGATGTGTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000345093.9
ENST00000615206.4
CDS-3UTR CCA 90 bp TCTGGAAATTTTCAGTATCCCAACCTGCATACTGGTAGACCCAGTGGGTGCCTATTAGCTAGGAAACACTaGGAGGTAGAGACTTCTCTG +
Preference number: 4 (lower is better)
Translates to: SGNFQYPNLHTGRPSGCLLARKH*EVETSL
Trigger: CAGAGAAGTCTCTACCTCCCAGTGTTTCCTAGCTAA...TAGGCACCCACTGGGTCTACCAGTATGCAGGTTGGGATACTGAAAATTTCCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345093.9
ENST00000615206.4
CDS-3UTR CCA 90 bp TTCGCTTGTTTTTGCTGCATTTTAGAGATCACTTTCCTGGACTTGCACTCTGCCAAAGCTGGTCTGTACTaGCTCCTCCAAGACTCCACT +
Preference number: 4 (lower is better)
Translates to: FACFCCILEITFLDLHSAKAGLY*LLQDST
Trigger: AGTGGAGTCTTGGAGGAGCCAGTACAGACCAGCTTT...GGCAGAGTGCAAGTCCAGGAAAGTGATCTCTAAAATGCAGCAAAAACAAGCGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000547967.5
3UTR CAA 72 bp ATCCTTCACAGGAAGAGAGGAAGCTCCTCATTTCAGTaGGGGTTACAGAGGTTTGGGGCAGATATCGTAAGT +
Preference number: 4 (lower is better)
Translates to: ILHRKRGSSSFQ*GLQRFGADIVS
Trigger: ACTTACGATATCTGCCCCAAACCTCTGTAACCCCAACTGAAATGAGGAGCTTCCTCTCTTCCTGTGAAGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345093.9
ENST00000615206.4
CDS-3UTR TCA 90 bp ACAAGAGGCAGTGCCAACCATATTTTAGCAAAAGCTAGGAGTAGCTTCTTGCTATGGCTATTCTCCGACTaGGTATTCCTTCCCAGTGAC +
Preference number: 4 (lower is better)
Translates to: TRGSANHILAKARSSFLLWLFSD*VFLPSD
Trigger: GTCACTGGGAAGGAATACTCAGTCGGAGAATAGCCA...TAGCAAGAAGCTACTCCTAGCTTTTGCTAAAATATGGTTGGCACTGCCTCTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
CDS-3UTR TCA 90 bp AAATGGATGGAGGTGGGGGCTTTCCCACCCAGACTGATAATTTATAGACATTTTTCCACTCAGTGCCACTaGAGAGATTCTCCCAGTAAC +
Preference number: 4 (lower is better)
Translates to: KWMEVGAFPPRLIIYRHFSTQCH*RDSPSN
Trigger: GTTACTGGGAGAATCTCTTCAGTGGCACTGAGTGGA...AAAATGTCTATAAATTATCAGTCTGGGTGGGAAAGCCCCCACCTCCATCCATTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
CDS-3UTR TCA 90 bp CCAAAGAAAATTATCAAAGTAACTAACTACAGTCACAGGGCTAGAGAGGGGTCTCCCATGTCTCATCACTaGAACCCAGGTCCTTCCAAG +
Preference number: 4 (lower is better)
Translates to: PKKIIKVTNYSHRAREGSPMSHH*NPGPSK
Trigger: CTTGGAAGGACCTGGGTTTCAGTGATGAGACATGGG...AGACCCCTCTCTAGCCCTGTGACTGTAGTTAGTTACTTTGATAATTTTCTTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
CDS-3UTR TCA 90 bp CCAAAGAAAATTATCAAAGTAACTAACTACAGTCACAGGGCTAGAGAGGGGTCTGGACATGTCTGTTGCTaGGAGAACCACTGGGTGATG +
Preference number: 4 (lower is better)
Translates to: PKKIIKVTNYSHRAREGSGHVCC*ENHWVM
Trigger: CATCACCCAGTGGTTCTCTCAGCAACAGACATGTCC...AGACCCCTCTCTAGCCCTGTGACTGTAGTTAGTTACTTTGATAATTTTCTTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
CDS-3UTR TCA 90 bp CAATGGCCAAAGAAAATTATCAAAGTAACTAACTACAGTCACAGGGCTAGAGAGTCTGAAGGTTGGGGTTaGCACTGCGGATTGCACGCA +
Preference number: 4 (lower is better)
Translates to: QWPKKIIKVTNYSHRARESEGWG*HCGLHA
Trigger: TGCGTGCAATCCGCAGTGTCAACCCCAACCTTCAGA...CTCTCTAGCCCTGTGACTGTAGTTAGTTACTTTGATAATTTTCTTTGGCCATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
CDS-3UTR TCA 90 bp GGCAGTGCCAACCATATTTTAGCAAAAGCTAGGAGTAGCTTCTTGCTAAACACACATGCGCAAATATCATaGCAAGGCCTGGCTCTTGCA +
Preference number: 4 (lower is better)
Translates to: GSANHILAKARSSFLLNTHAQIS*QGLALA
Trigger: TGCAAGAGCCAGGCCTTGTCATGATATTTGCGCATG...TGTGTTTAGCAAGAAGCTACTCCTAGCTTTTGCTAAAATATGGTTGGCACTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
CDS-3UTR TCA 90 bp ATAAACATACCTTGTGTGCATAGAAGCGCAGACTCAGCACAGAAATGCCTTTTTACCTTTAAGGTGGGCTaGACAGGGATACTGCTTGGC +
Preference number: 4 (lower is better)
Translates to: INIPCVHRSADSAQKCLFTFKVG*TGILLG
Trigger: GCCAAGCAGTATCCCTGTTCAGCCCACCTTAAAGGT...AAAAAGGCATTTCTGTGCTGAGTCTGCGCTTCTATGCACACAAGGTATGTTTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000345093.9
ENST00000615206.4
CDS-3UTR TCA 90 bp CCAAAGAAAATTATCAAAGTAACTAACTACAGTCACAGGGCTAGAGAGGGGTCTACCTTTAAGGTGGGCTaGACAGGGATACTGCTTGGC +
Preference number: 4 (lower is better)
Translates to: PKKIIKVTNYSHRAREGSTFKVG*TGILLG
Trigger: GCCAAGCAGTATCCCTGTTCAGCCCACCTTAAAGGT...AGACCCCTCTCTAGCCCTGTGACTGTAGTTAGTTACTTTGATAATTTTCTTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
CDS-3UTR TCA 90 bp CAATGGCCAAAGAAAATTATCAAAGTAACTAACTACAGTCACAGGGCTAGAGAGATGGTCTCGAACTCCTaGCCTTGTGATCCACCCACC +
Preference number: 4 (lower is better)
Translates to: QWPKKIIKVTNYSHRAREMVSNS*PCDPPT
Trigger: GGTGGGTGGATCACAAGGTCAGGAGTTCGAGACCAT...CTCTCTAGCCCTGTGACTGTAGTTAGTTACTTTGATAATTTTCTTTGGCCATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345093.9
ENST00000615206.4
CDS-3UTR GCA 90 bp ATTTCTTCAGGATGTCTGCTGCTTAGAGTCAACAGGCCTGACTGCTCTGATTCCTTGTCACAGGCAATCTaGAGCTTTGACAACATGTTC +
Preference number: 4 (lower is better)
Translates to: ISSGCLLLRVNRPDCSDSLSQAI*SFDNMF
Trigger: GAACATGTTGTCAAAGCTGCAGATTGCCTGTGACAA...GGAATCAGAGCAGTCAGGCCTGTTGACTCTAAGCAGCAGACATCCTGAAGAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
CDS-3UTR GCA 90 bp GGGGGAAAAGCACTGCTAATGTCACTAGGATACATACATTGCCTCTTATGCTCTACCACTGAGCGCAGGTaGTTAATGCAGTTATGGTTG +
Preference number: 4 (lower is better)
Translates to: GGKALLMSLGYIHCLLCSTTERR*LMQLWL
Trigger: CAACCATAACTGCATTAAGCACCTGCGCTCAGTGGT...AGAGCATAAGAGGCAATGTATGTATCCTAGTGACATTAGCAGTGCTTTTCCCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000345093.9
ENST00000615206.4
CDS-3UTR GCA 90 bp AATGTCACTAGGATACATACATTGCCTCTTATGCTCTATACTGTGACATGCTTAATGCGTGTCTGCTGCTaGTGTACCACTGAGCGCAGG +
Preference number: 4 (lower is better)
Translates to: NVTRIHTLPLMLYTVTCLMRVCC*CTTERR
Trigger: CCTGCGCTCAGTGGTACAGCAGCAGCAGACACGCAT...TAAGCATGTCACAGTATAGAGCATAAGAGGCAATGTATGTATCCTAGTGACATT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345093.9
ENST00000615206.4
CDS-3UTR GCA 90 bp ATAAACATACCTTGTGTGCATAGAAGCGCAGACTCAGCACAGAAATGCCTTTTTATGTCATCCCCCATGTaGTGGTTCTCACAGGCCATC +
Preference number: 4 (lower is better)
Translates to: INIPCVHRSADSAQKCLFMSSPM*WFSQAI
Trigger: GATGGCCTGTGAGAACCAGCACATGGGGGATGACAT...AAAAAGGCATTTCTGTGCTGAGTCTGCGCTTCTATGCACACAAGGTATGTTTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000345093.9
ENST00000615206.4
CDS-3UTR GCA 90 bp AGCACACAGTTCAGATCACTAGAGAGCTTTGGCTGCTACAGAACAGGAGATAGGTGCCACAAGAGGCAGTaGCAACCATATTTTAGCAAA +
Preference number: 4 (lower is better)
Translates to: STQFRSLESFGCYRTGDRCHKRQ*QPYFSK
Trigger: TTTGCTAAAATATGGTTGGCACTGCCTCTTGTGGCA...CCTATCTCCTGTTCTGTAGCAGCCAAAGCTCTCTAGTGATCTGAACTGTGTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345093.9
ENST00000615206.4
CDS-3UTR GCA 90 bp CAATGGCCAAAGAAAATTATCAAAGTAACTAACTACAGTCACAGGGCTAGAGAGCAGTGGCCCAATCTCTaGTCACTGCAAGCTCTGCCT +
Preference number: 4 (lower is better)
Translates to: QWPKKIIKVTNYSHRAREQWPNL*SLQALP
Trigger: AGGCAGAGCTTGCAGTGAGCAGAGATTGGGCCACTG...CTCTCTAGCCCTGTGACTGTAGTTAGTTACTTTGATAATTTTCTTTGGCCATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345093.9
ENST00000615206.4
CDS-3UTR GCA 90 bp AAGGTGAGAGAAAGGCAAAAGCAGAGGGGAAACCTTCTCAAGAAAGGGAGTAATTTCAAGCGATTCTTGTaGCTTAGCCTTCCAAGGAGC +
Preference number: 4 (lower is better)
Translates to: KVRERQKQRGNLLKKGSNFKRFL*LSLPRS
Trigger: GCTCCTTGGAAGGCTAAGGCACAAGAATCGCTTGAA...ATTACTCCCTTTCTTGAGAAGGTTTCCCCTCTGCTTTTGCCTTTCTCTCACCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345093.9
ENST00000615206.4
CDS-3UTR GCA 90 bp AGGTCCAGTCTTTCCCTAAGGGCCATCAGTGATGGCCAATTAACGGCCTCACTACTAGGATACATACATTaGCTCTTATGCTCTATACTG +
Preference number: 4 (lower is better)
Translates to: RSSLSLRAISDGQLTASLLGYIH*LLCSIL
Trigger: CAGTATAGAGCATAAGAGGCAATGTATGTATCCTAG...TAGTGAGGCCGTTAATTGGCCATCACTGATGGCCCTTAGGGAAAGACTGGACCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345093.9
ENST00000615206.4
CDS-3UTR GCA 90 bp GCTCATCTGGAAATTTTCAGTATCCCAACCTGCATACTGGTAGACCCAGTGGGTGCTTTCACATCAAAATaGAGAGTGCATGGCTGTATC +
Preference number: 4 (lower is better)
Translates to: AHLEIFSIPTCILVDPVGAFTSK*RVHGCI
Trigger: GATACAGCCATGCACTCTGCATTTTGATGTGAAAGC...ACCCACTGGGTCTACCAGTATGCAGGTTGGGATACTGAAAATTTCCAGATGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394013.6
ENST00000547967.5
CDS-3UTR GCA 90 bp CAATGGCCAAAGAAAATTATCAAAGTAACTAACTACAGTCACAGGGCTAGAGAGCCGACTCCTCGCCAGTaGTGCTCCCTTCTCACATTT +
Preference number: 4 (lower is better)
Translates to: QWPKKIIKVTNYSHRAREPTPRQ*CSLLTF
Trigger: AAATGTGAGAAGGGAGCAGCACTGGCGAGGAGTCGG...CTCTCTAGCCCTGTGACTGTAGTTAGTTACTTTGATAATTTTCTTTGGCCATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615206.4
CDS-3UTR CCA 90 bp TTCGCTTGTTTTTGCTGCATTTTAGAGATCACTTTCCTGGACTTGCACTCTGCCTCGTCAACATCCCCCTaGAAACGGGTTACATCATAC +
Preference number: 4 (lower is better)
Translates to: FACFCCILEITFLDLHSASSTSP*KRVTSY
Trigger: GTATGATGTAACCCGTTTCCAGGGGGATGTTGACGA...GGCAGAGTGCAAGTCCAGGAAAGTGATCTCTAAAATGCAGCAAAAACAAGCGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000547967.5
CDS-3UTR CCA 90 bp AACCAGAGTAAGTATAGCAGCGTTTTCAAATTCCTGAGCACAATGTCCCAGAGCTCGTCAACATCCCCCTaGAAACGGGTTACATCATAC +
Preference number: 4 (lower is better)
Translates to: NQSKYSSVFKFLSTMSQSSSTSP*KRVTSY
Trigger: GTATGATGTAACCCGTTTCCAGGGGGATGTTGACGA...GCTCTGGGACATTGTGCTCAGGAATTTGAAAACGCTGCTATACTTACTCTGGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000345093.9
ENST00000615206.4
CDS-3UTR CCA 90 bp TCATCTGGAAATTTTCAGTATCCCAACCTGCATACTGGTAGACCCAGTGGGTGCTGCTTAATGCAGTTATaGTTGGGCAGCTCATCTTTG +
Preference number: 4 (lower is better)
Translates to: SSGNFQYPNLHTGRPSGCCLMQL*LGSSSL
Trigger: CAAAGATGAGCTGCCCAACCATAACTGCATTAAGCA...GCACCCACTGGGTCTACCAGTATGCAGGTTGGGATACTGAAAATTTCCAGATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
CDS-3UTR CCA 90 bp AAACACATCAACCCCCAACAGATTAACCCCTACCCTAAACCCTGGCATTCCCTATGCTTAATGCAGTTATaGTTGGGCAGCTCATCTTTG +
Preference number: 4 (lower is better)
Translates to: KHINPQQINPYPKPWHSLCLMQL*LGSSSL
Trigger: CAAAGATGAGCTGCCCAACCATAACTGCATTAAGCA...TAGGGAATGCCAGGGTTTAGGGTAGGGGTTAATCTGTTGGGGGTTGATGTGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
CDS-3UTR CCA 90 bp AAATGGATGGAGGTGGGGGCTTTCCCACCCAGACTGATAATTTATAGACATTTTTATGCCTTTAGCAGCTaGATGTCTCGCTTCTGCTCC +
Preference number: 4 (lower is better)
Translates to: KWMEVGAFPPRLIIYRHFYAFSS*MSRFCS
Trigger: GGAGCAGAAGCGAGACATCCAGCTGCTAAAGGCATA...AAAATGTCTATAAATTATCAGTCTGGGTGGGAAAGCCCCCACCTCCATCCATTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
CDS-3UTR CCA 90 bp AAACTTGTAGGAAAGAAGAGCTCATCTGGAAATTTTCAGTATCCCAACCTGCATTCATCCCCCATGTGCTaGTTCTCACAGGCCATCACG +
Preference number: 4 (lower is better)
Translates to: KLVGKKSSSGNFQYPNLHSSPMC*FSQAIT
Trigger: CGTGATGGCCTGTGAGAACCAGCACATGGGGGATGA...ATGCAGGTTGGGATACTGAAAATTTCCAGATGAGCTCTTCTTTCCTACAAGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
CDS-3UTR CCA 90 bp AAACTTGTAGGAAAGAAGAGCTCATCTGGAAATTTTCAGTATCCCAACCTGCATGAAAATGGATGGAGGTaGGGGCTTTCCCACCCAGAC +
Preference number: 4 (lower is better)
Translates to: KLVGKKSSSGNFQYPNLHENGWR*GLSHPD
Trigger: GTCTGGGTGGGAAAGCCCCCACCTCCATCCATTTTC...ATGCAGGTTGGGATACTGAAAATTTCCAGATGAGCTCTTCTTTCCTACAAGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
CDS-3UTR CCA 90 bp TCATCTGGAAATTTTCAGTATCCCAACCTGCATACTGGTAGACCCAGTGGGTGCCCCTACCCTAAACCCTaGCATTCCCTAATTATGAAA +
Preference number: 4 (lower is better)
Translates to: SSGNFQYPNLHTGRPSGCPYPKP*HSLIMK
Trigger: TTTCATAATTAGGGAATGCCAGGGTTTAGGGTAGGG...GCACCCACTGGGTCTACCAGTATGCAGGTTGGGATACTGAAAATTTCCAGATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
CDS-3UTR CCA 90 bp GGCAGTGCCAACCATATTTTAGCAAAAGCTAGGAGTAGCTTCTTGCTAAACACAGCTCCTCATTTCAGTTaGGGTTACAGAGGTTTGGGG +
Preference number: 4 (lower is better)
Translates to: GSANHILAKARSSFLLNTAPHFS*GYRGLG
Trigger: CCCCAAACCTCTGTAACCCCAACTGAAATGAGGAGC...TGTGTTTAGCAAGAAGCTACTCCTAGCTTTTGCTAAAATATGGTTGGCACTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345093.9
ENST00000615206.4
CDS-3UTR CCA 90 bp GGAAAATGGATGGAGGTGGGGGCTTTCCCACCCAGACTGATAATTTATAGACATATCACTAGAGAGCTTTaGCTGCTACAGAACAGGAGA +
Preference number: 4 (lower is better)
Translates to: GKWMEVGAFPPRLIIYRHITREL*LLQNRR
Trigger: TCTCCTGTTCTGTAGCAGCCAAAGCTCTCTAGTGAT...ATGTCTATAAATTATCAGTCTGGGTGGGAAAGCCCCCACCTCCATCCATTTTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000345093.9
ENST00000615206.4
CDS-3UTR CCA 90 bp AAACACATCAACCCCCAACAGATTAACCCCTACCCTAAACCCTGGCATTCCCTAAAAATGCAGAGTGCATaGCTGTATCAAAAGCTGGTC +
Preference number: 4 (lower is better)
Translates to: KHINPQQINPYPKPWHSLKMQSA*LYQKLV
Trigger: GACCAGCTTTTGATACAGCCATGCACTCTGCATTTT...TAGGGAATGCCAGGGTTTAGGGTAGGGGTTAATCTGTTGGGGGTTGATGTGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000394013.6
ENST00000547967.5
3UTR CAA 72 bp GGCCAATTAACGGCCTCACTACTTATTTCTAGAGATTaGGCTCCACCCTTACCATTTCTTCAGGATGTCTGC +
Preference number: 4 (lower is better)
Translates to: GQLTASLLISRD*APPLPFLQDVC
Trigger: GCAGACATCCTGAAGAAATGGTAAGGGTGGAGCCAAATCTCTAGAAATAAGTAGTGAGGCCGTTAATTGGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
CDS-3UTR TCA 90 bp TGCAAAGGAATTCTAGATTCTAAAGCAAAGTTGCTTGTGGGACAAAGGAAAAAGAGTATTCCTTCCCAGTaGCAAGCTCCATCGCCCAGG +
Preference number: 4 (lower is better)
Translates to: CKGILDSKAKLLVGQRKKSIPSQ*QAPSPR
Trigger: CCTGGGCGATGGAGCTTGTCACTGGGAAGGAATACT...CTTTTTCCTTTGTCCCACAAGCAACTTTGCTTTAGAATCTAGAATTCCTTTGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000345093.9
ENST00000615206.4
CDS-3UTR TCA 90 bp GGCAGTGCCAACCATATTTTAGCAAAAGCTAGGAGTAGCTTCTTGCTAAACACAGGCAATCTGCAGCTTTaGCAACATGTTCCGCATGAT +
Preference number: 4 (lower is better)
Translates to: GSANHILAKARSSFLLNTGNLQL*QHVPHD
Trigger: ATCATGCGGAACATGTTGTCAAAGCTGCAGATTGCC...TGTGTTTAGCAAGAAGCTACTCCTAGCTTTTGCTAAAATATGGTTGGCACTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
CDS-3UTR TCA 90 bp CAATGGCCAAAGAAAATTATCAAAGTAACTAACTACAGTCACAGGGCTAGAGAGGTGTTTGTGTTCAGCTaGCGTCTTCTCCAGCTCTGC +
Preference number: 4 (lower is better)
Translates to: QWPKKIIKVTNYSHRAREVFVFS*RLLQLC
Trigger: GCAGAGCTGGAGAAGACGTCAGCTGAACACAAACAC...CTCTCTAGCCCTGTGACTGTAGTTAGTTACTTTGATAATTTTCTTTGGCCATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
CDS-3UTR TCA 90 bp CCAAAGAAAATTATCAAAGTAACTAACTACAGTCACAGGGCTAGAGAGGGGTCTTCCCAGCTGCTGGAGTaGTGGGATTTTCTGATTTCC +
Preference number: 4 (lower is better)
Translates to: PKKIIKVTNYSHRAREGSSQLLE*WDFLIS
Trigger: GGAAATCAGAAAATCCCATCACTCCAGCAGCTGGGA...AGACCCCTCTCTAGCCCTGTGACTGTAGTTAGTTACTTTGATAATTTTCTTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
CDS-3UTR TCA 90 bp AGGAGTAGCTTCTTGCTAAACACATCAACCCCCAACAGATTAACCCCTACCCTAATCCTCCAGGGAAATTaGATCTCTTTGTGCTTTCTG +
Preference number: 4 (lower is better)
Translates to: RSSFLLNTSTPNRLTPTLILQGN*ISLCFL
Trigger: CAGAAAGCACAAAGAGATTCAATTTCCCTGGAGGAT...TAGGGTAGGGGTTAATCTGTTGGGGGTTGATGTGTTTAGCAAGAAGCTACTCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
CDS-3UTR TCA 90 bp TGGATGGAGGTGGGGGCTTTCCCACCCAGACTGATAATTTATAGACATTTTAGGATCCTCCAGGGAAATTaGATCTCTTTGTGCTTTCTG +
Preference number: 4 (lower is better)
Translates to: WMEVGAFPPRLIIYRHFRILQGN*ISLCFL
Trigger: CAGAAAGCACAAAGAGATTCAATTTCCCTGGAGGAT...CCTAAAATGTCTATAAATTATCAGTCTGGGTGGGAAAGCCCCCACCTCCATCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
CDS-3UTR TCA 90 bp AAACTTGTAGGAAAGAAGAGCTCATCTGGAAATTTTCAGTATCCCAACCTGCATTGCCAACAATGTGGCTaGGATAGCCATGATCAGGCC +
Preference number: 4 (lower is better)
Translates to: KLVGKKSSSGNFQYPNLHCQQCG*DSHDQA
Trigger: GGCCTGATCATGGCTATCTCAGCCACATTGTTGGCA...ATGCAGGTTGGGATACTGAAAATTTCCAGATGAGCTCTTCTTTCCTACAAGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
CDS-3UTR TCA 90 bp AATGTCACTAGGATACATACATTGCCTCTTATGCTCTATACTGTGACATGCTTAATCCCAGTGGAGCCATaGTCCAACTACCCAGACCTG +
Preference number: 4 (lower is better)
Translates to: NVTRIHTLPLMLYTVTCLIPVEP*SNYPDL
Trigger: CAGGTCTGGGTAGTTGGATCATGGCTCCACTGGGAT...TAAGCATGTCACAGTATAGAGCATAAGAGGCAATGTATGTATCCTAGTGACATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345093.9
ENST00000615206.4
CDS-3UTR TCA 90 bp AGAGGGACGATTAGAGATTCCTTCCTCTGTCCTGATCCTCCAGGGAAATTGAATAGAGAAATGACCTATTaGAGGTGGCAGCTTTCACAT +
Preference number: 4 (lower is better)
Translates to: RGTIRDSFLCPDPPGKLNREMTY*RWQLSH
Trigger: ATGTGAAAGCTGCCACCTTCAATAGGTCATTTCTCT...ATTCAATTTCCCTGGAGGATCAGGACAGAGGAAGGAATCTCTAATCGTCCCTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394013.6
ENST00000547967.5
CDS-3UTR GCA 90 bp TGGATGGAGGTGGGGGCTTTCCCACCCAGACTGATAATTTATAGACATTTTAGGTTGTCACAGGCAATCTaGAGCTTTGACAACATGTTC +
Preference number: 4 (lower is better)
Translates to: WMEVGAFPPRLIIYRHFRLSQAI*SFDNMF
Trigger: GAACATGTTGTCAAAGCTGCAGATTGCCTGTGACAA...CCTAAAATGTCTATAAATTATCAGTCTGGGTGGGAAAGCCCCCACCTCCATCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
CDS-3UTR GCA 90 bp ACAAGAGGCAGTGCCAACCATATTTTAGCAAAAGCTAGGAGTAGCTTCTTGCTAACCACTGAGCGCAGGTaGTTAATGCAGTTATGGTTG +
Preference number: 4 (lower is better)
Translates to: TRGSANHILAKARSSFLLTTERR*LMQLWL
Trigger: CAACCATAACTGCATTAAGCACCTGCGCTCAGTGGT...TAGCAAGAAGCTACTCCTAGCTTTTGCTAAAATATGGTTGGCACTGCCTCTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
CDS-3UTR GCA 90 bp AATGTCACTAGGATACATACATTGCCTCTTATGCTCTATACTGTGACATGCTTAATCACGACAACAGCCTaGTTGCCAGGGATGCGCTTG +
Preference number: 4 (lower is better)
Translates to: NVTRIHTLPLMLYTVTCLITTTA*LPGMRL
Trigger: CAAGCGCATCCCTGGCAAGCAGGCTGTTGTCGTGAT...TAAGCATGTCACAGTATAGAGCATAAGAGGCAATGTATGTATCCTAGTGACATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345093.9
ENST00000615206.4
CDS-3UTR GCA 90 bp AAACTTGTAGGAAAGAAGAGCTCATCTGGAAATTTTCAGTATCCCAACCTGCATGCTGAACAGGGATACTaGTTGGCACAGAGGTCCAGT +
Preference number: 4 (lower is better)
Translates to: KLVGKKSSSGNFQYPNLHAEQGY*LAQRSS
Trigger: ACTGGACCTCTGTGCCAAGCAGTATCCCTGTTCAGC...ATGCAGGTTGGGATACTGAAAATTTCCAGATGAGCTCTTCTTTCCTACAAGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
CDS-3UTR GCA 90 bp GGAAAATGGATGGAGGTGGGGGCTTTCCCACCCAGACTGATAATTTATAGACATTGCCACAAGAGGCAGTaGCAACCATATTTTAGCAAA +
Preference number: 4 (lower is better)
Translates to: GKWMEVGAFPPRLIIYRHCHKRQ*QPYFSK
Trigger: TTTGCTAAAATATGGTTGGCACTGCCTCTTGTGGCA...ATGTCTATAAATTATCAGTCTGGGTGGGAAAGCCCCCACCTCCATCCATTTTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
CDS-3UTR GCA 90 bp AAATGGATGGAGGTGGGGGCTTTCCCACCCAGACTGATAATTTATAGACATTTTAACAATTATGGCCTGTaGCACAAGAGGCAGTGCCAA +
Preference number: 4 (lower is better)
Translates to: KWMEVGAFPPRLIIYRHFNNYGL*HKRQCQ
Trigger: TTGGCACTGCCTCTTGTGGCACAGGCCATAATTGTT...AAAATGTCTATAAATTATCAGTCTGGGTGGGAAAGCCCCCACCTCCATCCATTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
CDS-3UTR GCA 90 bp AAACTTGTAGGAAAGAAGAGCTCATCTGGAAATTTTCAGTATCCCAACCTGCATGGGCACAGGCATCGATaGTGGACTGTCATATCCTTC +
Preference number: 4 (lower is better)
Translates to: KLVGKKSSSGNFQYPNLHGHRHR*WTVISF
Trigger: GAAGGATATGACAGTCCAGCATCGATGCCTGTGCCC...ATGCAGGTTGGGATACTGAAAATTTCCAGATGAGCTCTTCTTTCCTACAAGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345093.9
ENST00000615206.4
CDS-3UTR GCA 90 bp CAATGGCCAAAGAAAATTATCAAAGTAACTAACTACAGTCACAGGGCTAGAGAGCCAACTACCCAGACCTaGAGCAAGCTAGCCTGGAAT +
Preference number: 4 (lower is better)
Translates to: QWPKKIIKVTNYSHRAREPTTQT*SKLAWN
Trigger: ATTCCAGGCTAGCTTGCTGCAGGTCTGGGTAGTTGG...CTCTCTAGCCCTGTGACTGTAGTTAGTTACTTTGATAATTTTCTTTGGCCATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345093.9
ENST00000615206.4
CDS-3UTR GCA 90 bp AGGAGTAGCTTCTTGCTAAACACATCAACCCCCAACAGATTAACCCCTACCCTAGCTTTCACATCAAAATaGAGAGTGCATGGCTGTATC +
Preference number: 4 (lower is better)
Translates to: RSSFLLNTSTPNRLTPTLAFTSK*RVHGCI
Trigger: GATACAGCCATGCACTCTGCATTTTGATGTGAAAGC...TAGGGTAGGGGTTAATCTGTTGGGGGTTGATGTGTTTAGCAAGAAGCTACTCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000394013.6
ENST00000547967.5
CDS-3UTR GCA 90 bp ACAAGAGGCAGTGCCAACCATATTTTAGCAAAAGCTAGGAGTAGCTTCTTGCTAGCTTCTCCTCATACTTaGCCCAGGATGATACAACTG +
Preference number: 4 (lower is better)
Translates to: TRGSANHILAKARSSFLLASPHT*PRMIQL
Trigger: CAGTTGTATCATCCTGGGGCAAGTATGAGGAGAAGC...TAGCAAGAAGCTACTCCTAGCTTTTGCTAAAATATGGTTGGCACTGCCTCTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394013.6
ENST00000547967.5
CDS-3UTR GCA 90 bp ACACCTTTAAGGTGGGCTGAACAGGGATACTGCTTGGCACAGAGGTCCAGTCTTTACTTCGCTTGTTTTTaGTGCATTTTAGAGATCACT +
Preference number: 4 (lower is better)
Translates to: TPLRWAEQGYCLAQRSSLYFACF*CILEIT
Trigger: AGTGATCTCTAAAATGCAGCAAAAACAAGCGAAGTA...AAGACTGGACCTCTGTGCCAAGCAGTATCCCTGTTCAGCCCACCTTAAAGGTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000547967.5
CDS-3UTR CCA 90 bp AAATGGATGGAGGTGGGGGCTTTCCCACCCAGACTGATAATTTATAGACATTTTTATCATGACAAGGCCTaGCTCTTGCACCATGTCATC +
Preference number: 4 (lower is better)
Translates to: KWMEVGAFPPRLIIYRHFYHDKA*LLHHVI
Trigger: GATGACATGGTGCAAGAGCCAGGCCTTGTCATGATA...AAAATGTCTATAAATTATCAGTCTGGGTGGGAAAGCCCCCACCTCCATCCATTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
CDS-3UTR CCA 90 bp CCAAAGAAAATTATCAAAGTAACTAACTACAGTCACAGGGCTAGAGAGGGGTCTCAAAGGGAGGAAATCTaGGTTTCCCACCTGAAAGGC +
Preference number: 4 (lower is better)
Translates to: PKKIIKVTNYSHRAREGSQREEI*VSHLKG
Trigger: GCCTTTCAGGTGGGAAACCCAGATTTCCTCCCTTTG...AGACCCCTCTCTAGCCCTGTGACTGTAGTTAGTTACTTTGATAATTTTCTTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
CDS-3UTR CCA 90 bp TTCACTTGTATACTTCGCTTGTTTTTGCTGCATTTTAGAGATCACTTTCCTGGAGAAAATGGATGGAGGTaGGGGCTTTCCCACCCAGAC +
Preference number: 4 (lower is better)
Translates to: FTCILRLFLLHFRDHFPGENGWR*GLSHPD
Trigger: GTCTGGGTGGGAAAGCCCCCACCTCCATCCATTTTC...TCCAGGAAAGTGATCTCTAAAATGCAGCAAAAACAAGCGAAGTATACAAGTGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000547967.5
CDS-3UTR CCA 90 bp GGGAAGCACACAGTTCAGATCACTAGAGAGCTTTGGCTGCTACAGAACAGGAGATTATTTCTAGAGATTTaGCTCCACCCTTACCATTTC +
Preference number: 4 (lower is better)
Translates to: GKHTVQITRELWLLQNRRLFLEI*LHPYHF
Trigger: GAAATGGTAAGGGTGGAGCCAAATCTCTAGAAATAA...TCTCCTGTTCTGTAGCAGCCAAAGCTCTCTAGTGATCTGAACTGTGTGCTTCCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345093.9
ENST00000615206.4
CDS-3UTR CCA 90 bp GCCACAAGAGGCAGTGCCAACCATATTTTAGCAAAAGCTAGGAGTAGCTTCTTGCCCTACCCTAAACCCTaGCATTCCCTAATTATGAAA +
Preference number: 4 (lower is better)
Translates to: ATRGSANHILAKARSSFLPYPKP*HSLIMK
Trigger: TTTCATAATTAGGGAATGCCAGGGTTTAGGGTAGGG...CAAGAAGCTACTCCTAGCTTTTGCTAAAATATGGTTGGCACTGCCTCTTGTGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
CDS-3UTR CCA 90 bp GACATGGAATTTAGGATAAAGGCAGACCCTGGGAAGCACACAGTTCAGATCACTCCCTACCCTAAACCCTaGCATTCCCTAATTATGAAA +
Preference number: 4 (lower is better)
Translates to: DMEFRIKADPGKHTVQITPYPKP*HSLIMK
Trigger: TTTCATAATTAGGGAATGCCAGGGTTTAGGGTAGGG...AGTGATCTGAACTGTGTGCTTCCCAGGGTCTGCCTTTATCCTAAATTCCATGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345093.9
ENST00000615206.4
CDS-3UTR CCA 90 bp CATGATCCAACTACCCAGACCTGCAGCAAGCTAGCCTGGAATAAAATTCTGAGATGCAGCAAGCTAGCCTaGAATAAAATTCTGAGAGGA +
Preference number: 4 (lower is better)
Translates to: HDPTTQTCSKLAWNKILRCSKLA*NKILRG
Trigger: TCCTCTCAGAATTTTATTCCAGGCTAGCTTGCTGCA...TCTCAGAATTTTATTCCAGGCTAGCTTGCTGCAGGTCTGGGTAGTTGGATCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345093.9
ENST00000615206.4
CDS-3UTR TCA 90 bp TGCAAAGGAATTCTAGATTCTAAAGCAAAGTTGCTTGTGGGACAAAGGAAAAAGGGACATGTCTGTTGCTaGGAGAACCACTGGGTGATG +
Preference number: 4 (lower is better)
Translates to: CKGILDSKAKLLVGQRKKGHVCC*ENHWVM
Trigger: CATCACCCAGTGGTTCTCTCAGCAACAGACATGTCC...CTTTTTCCTTTGTCCCACAAGCAACTTTGCTTTAGAATCTAGAATTCCTTTGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000345093.9
ENST00000615206.4
CDS-3UTR TCA 90 bp AATGTCACTAGGATACATACATTGCCTCTTATGCTCTATACTGTGACATGCTTAATGGGAAAGCAGCTGTaGAGTGCACACTACTCCCAG +
Preference number: 4 (lower is better)
Translates to: NVTRIHTLPLMLYTVTCLMGKQL*SAHYSQ
Trigger: CTGGGAGTAGTGTGCACTTCACAGCTGCTTTCCCAT...TAAGCATGTCACAGTATAGAGCATAAGAGGCAATGTATGTATCCTAGTGACATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345093.9
ENST00000615206.4
CDS-3UTR TCA 90 bp ACAAGAGGCAGTGCCAACCATATTTTAGCAAAAGCTAGGAGTAGCTTCTTGCTACCTGCTGTTGTAATGTaGAAGCAGCCACAGACAATA +
Preference number: 4 (lower is better)
Translates to: TRGSANHILAKARSSFLLPAVVM*KQPQTI
Trigger: TATTGTCTGTGGCTGCTTTCACATTACAACAGCAGG...TAGCAAGAAGCTACTCCTAGCTTTTGCTAAAATATGGTTGGCACTGCCTCTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000345093.9
CDS-3UTR GCA 90 bp AAACTTGTAGGAAAGAAGAGCTCATCTGGAAATTTTCAGTATCCCAACCTGCATGTCAACAGGCCTGACTaGTCTGATTCCCTGGTTTTG +
Preference number: 4 (lower is better)
Translates to: KLVGKKSSSGNFQYPNLHVNRPD*SDSLVL
Trigger: CAAAACCAGGGAATCAGAGCAGTCAGGCCTGTTGAC...ATGCAGGTTGGGATACTGAAAATTTCCAGATGAGCTCTTCTTTCCTACAAGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
CDS-3UTR GCA 90 bp CCAAAGAAAATTATCAAAGTAACTAACTACAGTCACAGGGCTAGAGAGGGGTCTTTCAGTATCCCAACCTaGATACTGGTAGACCCAGTG +
Preference number: 4 (lower is better)
Translates to: PKKIIKVTNYSHRAREGSFSIPT*ILVDPV
Trigger: CACTGGGTCTACCAGTATGCAGGTTGGGATACTGAA...AGACCCCTCTCTAGCCCTGTGACTGTAGTTAGTTACTTTGATAATTTTCTTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
CDS-3UTR GCA 90 bp CCAAAGAAAATTATCAAAGTAACTAACTACAGTCACAGGGCTAGAGAGGGGTCTAACAATTATGGCCTGTaGCACAAGAGGCAGTGCCAA +
Preference number: 4 (lower is better)
Translates to: PKKIIKVTNYSHRAREGSNNYGL*HKRQCQ
Trigger: TTGGCACTGCCTCTTGTGGCACAGGCCATAATTGTT...AGACCCCTCTCTAGCCCTGTGACTGTAGTTAGTTACTTTGATAATTTTCTTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
CDS-3UTR GCA 90 bp AGAGGGACGATTAGAGATTCCTTCCTCTGTCCTGATCCTCCAGGGAAATTGAATCATCAAAATGCAGAGTaGATGGCTGTATCAAAAGCT +
Preference number: 4 (lower is better)
Translates to: RGTIRDSFLCPDPPGKLNHQNAE*MAVSKA
Trigger: AGCTTTTGATACAGCCATGCACTCTGCATTTTGATG...ATTCAATTTCCCTGGAGGATCAGGACAGAGGAAGGAATCTCTAATCGTCCCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394013.6
ENST00000547967.5
CDS-3UTR CCA 90 bp CCAAAGAAAATTATCAAAGTAACTAACTACAGTCACAGGGCTAGAGAGGGGTCTAACACTACGGTCCACTaGACATGTCTGTTGCTGAGA +
Preference number: 4 (lower is better)
Translates to: PKKIIKVTNYSHRAREGSNTTVH*TCLLLR
Trigger: TCTCAGCAACAGACATGTCCAGTGGACCGTAGTGTT...AGACCCCTCTCTAGCCCTGTGACTGTAGTTAGTTACTTTGATAATTTTCTTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
CDS-3UTR CCA 90 bp TGCAAAGGAATTCTAGATTCTAAAGCAAAGTTGCTTGTGGGACAAAGGAAAAAGCGCTTGATTACAGCCTaGAGCACAGCATCAGGAGTC +
Preference number: 4 (lower is better)
Translates to: CKGILDSKAKLLVGQRKKRLITA*STASGV
Trigger: GACTCCTGATGCTGTGCTCCAGGCTGTAATCAAGCG...CTTTTTCCTTTGTCCCACAAGCAACTTTGCTTTAGAATCTAGAATTCCTTTGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000345093.9
ENST00000615206.4
CDS-3UTR CCA 90 bp AAACTTGTAGGAAAGAAGAGCTCATCTGGAAATTTTCAGTATCCCAACCTGCATCAAAGGGAGGAAATCTaGGTTTCCCACCTGAAAGGC +
Preference number: 4 (lower is better)
Translates to: KLVGKKSSSGNFQYPNLHQREEI*VSHLKG
Trigger: GCCTTTCAGGTGGGAAACCCAGATTTCCTCCCTTTG...ATGCAGGTTGGGATACTGAAAATTTCCAGATGAGCTCTTCTTTCCTACAAGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
CDS-3UTR CCA 90 bp TGCAAAGGAATTCTAGATTCTAAAGCAAAGTTGCTTGTGGGACAAAGGAAAAAGAAGCAGGAAAATGGATaGAGGTGGGGGCTTTCCCAC +
Preference number: 4 (lower is better)
Translates to: CKGILDSKAKLLVGQRKKKQENG*RWGLSH
Trigger: GTGGGAAAGCCCCCACCTCCATCCATTTTCCTGCTT...CTTTTTCCTTTGTCCCACAAGCAACTTTGCTTTAGAATCTAGAATTCCTTTGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000345093.9
ENST00000615206.4
CDS-3UTR CCA 90 bp TCATCTGGAAATTTTCAGTATCCCAACCTGCATACTGGTAGACCCAGTGGGTGCTTATTTCTAGAGATTTaGCTCCACCCTTACCATTTC +
Preference number: 4 (lower is better)
Translates to: SSGNFQYPNLHTGRPSGCLFLEI*LHPYHF
Trigger: GAAATGGTAAGGGTGGAGCCAAATCTCTAGAAATAA...GCACCCACTGGGTCTACCAGTATGCAGGTTGGGATACTGAAAATTTCCAGATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
CDS-3UTR CCA 90 bp TCAGCCGAGGACTCCCTTGGCTCTTCCTATATTAAAGCCAAAGGTTGTGCTGAATTATTTCTAGAGATTTaGCTCCACCCTTACCATTTC +
Preference number: 4 (lower is better)
Translates to: SAEDSLGSSYIKAKGCAELFLEI*LHPYHF
Trigger: GAAATGGTAAGGGTGGAGCCAAATCTCTAGAAATAA...TTCAGCACAACCTTTGGCTTTAATATAGGAAGAGCCAAGGGAGTCCTCGGCTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345093.9
ENST00000615206.4
CDS-3UTR CCA 90 bp GGCAGTGCCAACCATATTTTAGCAAAAGCTAGGAGTAGCTTCTTGCTAAACACAGTGCAGTCAACACCATaGAACAGCACATACAACACA +
Preference number: 4 (lower is better)
Translates to: GSANHILAKARSSFLLNTVQSTP*NSTYNT
Trigger: TGTGTTGTATGTGCTGTTCCATGGTGTTGACTGCAC...TGTGTTTAGCAAGAAGCTACTCCTAGCTTTTGCTAAAATATGGTTGGCACTGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345093.9
ENST00000615206.4
CDS-3UTR CCA 90 bp GGCAGTGCCAACCATATTTTAGCAAAAGCTAGGAGTAGCTTCTTGCTAAACACAATCACTAGAGAGCTTTaGCTGCTACAGAACAGGAGA +
Preference number: 4 (lower is better)
Translates to: GSANHILAKARSSFLLNTITREL*LLQNRR
Trigger: TCTCCTGTTCTGTAGCAGCCAAAGCTCTCTAGTGAT...TGTGTTTAGCAAGAAGCTACTCCTAGCTTTTGCTAAAATATGGTTGGCACTGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345093.9
ENST00000615206.4
CDS-3UTR TCA 90 bp AATGTCACTAGGATACATACATTGCCTCTTATGCTCTATACTGTGACATGCTTATCCACTCAGTGCCACTaGAGAGATTCTCCCAGTAAC +
Preference number: 4 (lower is better)
Translates to: NVTRIHTLPLMLYTVTCLSTQCH*RDSPSN
Trigger: GTTACTGGGAGAATCTCTTCAGTGGCACTGAGTGGA...TAAGCATGTCACAGTATAGAGCATAAGAGGCAATGTATGTATCCTAGTGACATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345093.9
ENST00000615206.4
CDS-3UTR TCA 90 bp GGGAAAAGCACTGCTAATGTCACTAGGATACATACATTGCCTCTTATGCTCTATCTGAAAAGCCTTTCCTaGTACCCATCAGAATCAGGA +
Preference number: 4 (lower is better)
Translates to: GKSTANVTRIHTLPLMLYLKSLS*YPSESG
Trigger: TCCTGATTCTGATGGGTATCAGGAAAGGCTTTTCAG...ATAGAGCATAAGAGGCAATGTATGTATCCTAGTGACATTAGCAGTGCTTTTCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345093.9
ENST00000615206.4
CDS-3UTR GCA 90 bp ACAAGAGGCAGTGCCAACCATATTTTAGCAAAAGCTAGGAGTAGCTTCTTGCTATGCCACAAGAGGCAGTaGCAACCATATTTTAGCAAA +
Preference number: 4 (lower is better)
Translates to: TRGSANHILAKARSSFLLCHKRQ*QPYFSK
Trigger: TTTGCTAAAATATGGTTGGCACTGCCTCTTGTGGCA...TAGCAAGAAGCTACTCCTAGCTTTTGCTAAAATATGGTTGGCACTGCCTCTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
CDS-3UTR GCA 90 bp AGAGGGACGATTAGAGATTCCTTCCTCTGTCCTGATCCTCCAGGGAAATTGAATCTAGGATACATACATTaGCTCTTATGCTCTATACTG +
Preference number: 4 (lower is better)
Translates to: RGTIRDSFLCPDPPGKLNLGYIH*LLCSIL
Trigger: CAGTATAGAGCATAAGAGGCAATGTATGTATCCTAG...ATTCAATTTCCCTGGAGGATCAGGACAGAGGAAGGAATCTCTAATCGTCCCTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345093.9
ENST00000615206.4
CDS-3UTR CCA 90 bp CAATGGCCAAAGAAAATTATCAAAGTAACTAACTACAGTCACAGGGCTAGAGAGAACACTACGGTCCACTaGACATGTCTGTTGCTGAGA +
Preference number: 4 (lower is better)
Translates to: QWPKKIIKVTNYSHRARENTTVH*TCLLLR
Trigger: TCTCAGCAACAGACATGTCCAGTGGACCGTAGTGTT...CTCTCTAGCCCTGTGACTGTAGTTAGTTACTTTGATAATTTTCTTTGGCCATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
CDS-3UTR CCA 90 bp AAACTTGTAGGAAAGAAGAGCTCATCTGGAAATTTTCAGTATCCCAACCTGCATTATCATGACAAGGCCTaGCTCTTGCACCATGTCATC +
Preference number: 4 (lower is better)
Translates to: KLVGKKSSSGNFQYPNLHYHDKA*LLHHVI
Trigger: GATGACATGGTGCAAGAGCCAGGCCTTGTCATGATA...ATGCAGGTTGGGATACTGAAAATTTCCAGATGAGCTCTTCTTTCCTACAAGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
CDS-3UTR CCA 90 bp GGCAGTGCCAACCATATTTTAGCAAAAGCTAGGAGTAGCTTCTTGCTAAACACACATTTTAGGGGAATATaGCAAAGGGAGGAAATCTGG +
Preference number: 4 (lower is better)
Translates to: GSANHILAKARSSFLLNTHFRGI*QREEIW
Trigger: CCAGATTTCCTCCCTTTGCCATATTCCCCTAAAATG...TGTGTTTAGCAAGAAGCTACTCCTAGCTTTTGCTAAAATATGGTTGGCACTGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
CDS-3UTR CCA 90 bp AAACTTGTAGGAAAGAAGAGCTCATCTGGAAATTTTCAGTATCCCAACCTGCATCTGATTCCCTGGTTTTaGAGGAGAGGGACGATTAGA +
Preference number: 4 (lower is better)
Translates to: KLVGKKSSSGNFQYPNLHLIPWF*RRGTIR
Trigger: TCTAATCGTCCCTCTCCTCCAAAACCAGGGAATCAG...ATGCAGGTTGGGATACTGAAAATTTCCAGATGAGCTCTTCTTTCCTACAAGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
CDS-3UTR CCA 90 bp AAACTTGTAGGAAAGAAGAGCTCATCTGGAAATTTTCAGTATCCCAACCTGCATCACAGGCATCGATGCTaGACTGTCATATCCTTCACA +
Preference number: 4 (lower is better)
Translates to: KLVGKKSSSGNFQYPNLHHRHRC*TVISFT
Trigger: TGTGAAGGATATGACAGTCCAGCATCGATGCCTGTG...ATGCAGGTTGGGATACTGAAAATTTCCAGATGAGCTCTTCTTTCCTACAAGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345093.9
ENST00000615206.4
CDS-3UTR CCA 90 bp CAATGGCCAAAGAAAATTATCAAAGTAACTAACTACAGTCACAGGGCTAGAGAGCACAGGCATCGATGCTaGACTGTCATATCCTTCACA +
Preference number: 4 (lower is better)
Translates to: QWPKKIIKVTNYSHRAREHRHRC*TVISFT
Trigger: TGTGAAGGATATGACAGTCCAGCATCGATGCCTGTG...CTCTCTAGCCCTGTGACTGTAGTTAGTTACTTTGATAATTTTCTTTGGCCATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345093.9
ENST00000615206.4
3UTR CAA 72 bp AGAGATTCCTTCCTCTGTCCTGATCCTCCAGGGAAATaGAATCTCTTTGTGCTTTCTGAAAATAACTGGAAC +
Preference number: 4 (lower is better)
Translates to: RDSFLCPDPPGK*NLFVLSENNWN
Trigger: GTTCCAGTTATTTTCAGAAAGCACAAAGAGATTCAATTTCCCTGGAGGATCAGGACAGAGGAAGGAATCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
CDS-3UTR TCA 90 bp GGGAAAAGCACTGCTAATGTCACTAGGATACATACATTGCCTCTTATGCTCTATATCCTCCAGGGAAATTaGATCTCTTTGTGCTTTCTG +
Preference number: 4 (lower is better)
Translates to: GKSTANVTRIHTLPLMLYILQGN*ISLCFL
Trigger: CAGAAAGCACAAAGAGATTCAATTTCCCTGGAGGAT...ATAGAGCATAAGAGGCAATGTATGTATCCTAGTGACATTAGCAGTGCTTTTCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345093.9
ENST00000615206.4
CDS-3UTR GCA 90 bp CCAAAGAAAATTATCAAAGTAACTAACTACAGTCACAGGGCTAGAGAGGGGTCTTTGTCACAGGCAATCTaGAGCTTTGACAACATGTTC +
Preference number: 4 (lower is better)
Translates to: PKKIIKVTNYSHRAREGSLSQAI*SFDNMF
Trigger: GAACATGTTGTCAAAGCTGCAGATTGCCTGTGACAA...AGACCCCTCTCTAGCCCTGTGACTGTAGTTAGTTACTTTGATAATTTTCTTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
CDS-3UTR GCA 90 bp TTCACTTGTATACTTCGCTTGTTTTTGCTGCATTTTAGAGATCACTTTCCTGGATTCAGTATCCCAACCTaGATACTGGTAGACCCAGTG +
Preference number: 4 (lower is better)
Translates to: FTCILRLFLLHFRDHFPGFSIPT*ILVDPV
Trigger: CACTGGGTCTACCAGTATGCAGGTTGGGATACTGAA...TCCAGGAAAGTGATCTCTAAAATGCAGCAAAAACAAGCGAAGTATACAAGTGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000547967.5
CDS-3UTR GCA 90 bp TCCCTAAGGGCCATCAGTGATGGCCAATTAACGGCCTCACTACTTATTTCTAGAATTCTAAAGCAAAGTTaGTTGTGGGACAAAGGAAAA +
Preference number: 4 (lower is better)
Translates to: SLRAISDGQLTASLLISRILKQS*LWDKGK
Trigger: TTTTCCTTTGTCCCACAAGCAACTTTGCTTTAGAAT...TCTAGAAATAAGTAGTGAGGCCGTTAATTGGCCATCACTGATGGCCCTTAGGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345093.9
ENST00000615206.4
CDS-3UTR CCA 90 bp AATGTCACTAGGATACATACATTGCCTCTTATGCTCTATACTGTGACATGCTTAAACACTACGGTCCACTaGACATGTCTGTTGCTGAGA +
Preference number: 4 (lower is better)
Translates to: NVTRIHTLPLMLYTVTCLNTTVH*TCLLLR
Trigger: TCTCAGCAACAGACATGTCCAGTGGACCGTAGTGTT...TAAGCATGTCACAGTATAGAGCATAAGAGGCAATGTATGTATCCTAGTGACATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345093.9
ENST00000615206.4
CDS-3UTR CCA 90 bp GGGAAAAGCACTGCTAATGTCACTAGGATACATACATTGCCTCTTATGCTCTATTGCTTAATGCAGTTATaGTTGGGCAGCTCATCTTTG +
Preference number: 4 (lower is better)
Translates to: GKSTANVTRIHTLPLMLYCLMQL*LGSSSL
Trigger: CAAAGATGAGCTGCCCAACCATAACTGCATTAAGCA...ATAGAGCATAAGAGGCAATGTATGTATCCTAGTGACATTAGCAGTGCTTTTCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345093.9
ENST00000615206.4
CDS-3UTR CCA 90 bp CCAAAGAAAATTATCAAAGTAACTAACTACAGTCACAGGGCTAGAGAGGGGTCTCATTTTAGGGGAATATaGCAAAGGGAGGAAATCTGG +
Preference number: 4 (lower is better)
Translates to: PKKIIKVTNYSHRAREGSHFRGI*QREEIW
Trigger: CCAGATTTCCTCCCTTTGCCATATTCCCCTAAAATG...AGACCCCTCTCTAGCCCTGTGACTGTAGTTAGTTACTTTGATAATTTTCTTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
CDS-3UTR CCA 90 bp GGGAAAAGCACTGCTAATGTCACTAGGATACATACATTGCCTCTTATGCTCTATCATTTTAGGGGAATATaGCAAAGGGAGGAAATCTGG +
Preference number: 4 (lower is better)
Translates to: GKSTANVTRIHTLPLMLYHFRGI*QREEIW
Trigger: CCAGATTTCCTCCCTTTGCCATATTCCCCTAAAATG...ATAGAGCATAAGAGGCAATGTATGTATCCTAGTGACATTAGCAGTGCTTTTCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000345093.9
ENST00000615206.4
CDS-3UTR CCA 90 bp GTAAGTTCAGCCGAGGACTCCCTTGGCTCTTCCTATATTAAAGCCAAAGGTTGTAAAGAAGAGCTCATCTaGAAATTTTCAGTATCCCAA +
Preference number: 4 (lower is better)
Translates to: VSSAEDSLGSSYIKAKGCKEELI*KFSVSQ
Trigger: TTGGGATACTGAAAATTTCCAGATGAGCTCTTCTTT...ACAACCTTTGGCTTTAATATAGGAAGAGCCAAGGGAGTCCTCGGCTGAACTTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345093.9
ENST00000615206.4
CDS-3UTR CCA 90 bp GGAAAATGGATGGAGGTGGGGGCTTTCCCACCCAGACTGATAATTTATAGACATAAAGAAGAGCTCATCTaGAAATTTTCAGTATCCCAA +
Preference number: 4 (lower is better)
Translates to: GKWMEVGAFPPRLIIYRHKEELI*KFSVSQ
Trigger: TTGGGATACTGAAAATTTCCAGATGAGCTCTTCTTT...ATGTCTATAAATTATCAGTCTGGGTGGGAAAGCCCCCACCTCCATCCATTTTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
CDS-3UTR CCA 90 bp AGAGGGACGATTAGAGATTCCTTCCTCTGTCCTGATCCTCCAGGGAAATTGAATAAAGAAGAGCTCATCTaGAAATTTTCAGTATCCCAA +
Preference number: 4 (lower is better)
Translates to: RGTIRDSFLCPDPPGKLNKEELI*KFSVSQ
Trigger: TTGGGATACTGAAAATTTCCAGATGAGCTCTTCTTT...ATTCAATTTCCCTGGAGGATCAGGACAGAGGAAGGAATCTCTAATCGTCCCTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
CDS-3UTR GCA 90 bp ATAAACATACCTTGTGTGCATAGAAGCGCAGACTCAGCACAGAAATGCCTTTTTAGAGACTTCTCTGCCTaGAAAGGAATTCTAGATTCT +
Preference number: 4 (lower is better)
Translates to: INIPCVHRSADSAQKCLFRDFSA*KGILDS
Trigger: AGAATCTAGAATTCCTTTGCAGGCAGAGAAGTCTCT...AAAAAGGCATTTCTGTGCTGAGTCTGCGCTTCTATGCACACAAGGTATGTTTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000345093.9
ENST00000615206.4
3UTR CAA 72 bp GGGAAAAGCACTGCTAATGTCACTAGGATACATACATaGCCTCTTATGCTCTATACTGTGACATGCTTATCA +
Preference number: 4 (lower is better)
Translates to: GKSTANVTRIHT*PLMLYTVTCLS
Trigger: TGATAAGCATGTCACAGTATAGAGCATAAGAGGCAATGTATGTATCCTAGTGACATTAGCAGTGCTTTTCCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345093.9
ENST00000615206.4
CDS-3UTR GCA 90 bp AATGTCACTAGGATACATACATTGCCTCTTATGCTCTATACTGTGACATGCTTATGCCACAAGAGGCAGTaGCAACCATATTTTAGCAAA +
Preference number: 4 (lower is better)
Translates to: NVTRIHTLPLMLYTVTCLCHKRQ*QPYFSK
Trigger: TTTGCTAAAATATGGTTGGCACTGCCTCTTGTGGCA...TAAGCATGTCACAGTATAGAGCATAAGAGGCAATGTATGTATCCTAGTGACATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345093.9
ENST00000615206.4
CDS-3UTR CCA 90 bp ACAAGAGGCAGTGCCAACCATATTTTAGCAAAAGCTAGGAGTAGCTTCTTGCTAAAAGAAGAGCTCATCTaGAAATTTTCAGTATCCCAA +
Preference number: 4 (lower is better)
Translates to: TRGSANHILAKARSSFLLKEELI*KFSVSQ
Trigger: TTGGGATACTGAAAATTTCCAGATGAGCTCTTCTTT...TAGCAAGAAGCTACTCCTAGCTTTTGCTAAAATATGGTTGGCACTGCCTCTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
3UTR CAA 72 bp GAGATCTTAGACTTCACTTGTATACTTCGCTTGTTTTaGCTGCATTTTAGAGATCACTTTCCTGGACTTGCA +
Preference number: 4 (lower is better)
Translates to: EILDFTCILRLF*LHFRDHFPGLA
Trigger: TGCAAGTCCAGGAAAGTGATCTCTAAAATGCAGCAAAAACAAGCGAAGTATACAAGTGAAGTCTAAGATCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547967.5
CDS-3UTR GCA 90 bp ATAAACATACCTTGTGTGCATAGAAGCGCAGACTCAGCACAGAAATGCCTTTTTATTCTAAAGCAAAGTTaGTTGTGGGACAAAGGAAAA +
Preference number: 4 (lower is better)
Translates to: INIPCVHRSADSAQKCLFILKQS*LWDKGK
Trigger: TTTTCCTTTGTCCCACAAGCAACTTTGCTTTAGAAT...AAAAAGGCATTTCTGTGCTGAGTCTGCGCTTCTATGCACACAAGGTATGTTTAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000345093.9
ENST00000615206.4
3UTR CAA 72 bp CTGAAAGAGATCTTAGACTTCACTTGTATACTTCGCTaGTTTTTGCTGCATTTTAGAGATCACTTTCCTGGA +
Preference number: 4 (lower is better)
Translates to: LKEILDFTCILR*FLLHFRDHFPG
Trigger: TCCAGGAAAGTGATCTCTAAAATGCAGCAAAAACAAGCGAAGTATACAAGTGAAGTCTAAGATCTCTTTCAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000547967.5
CDS GCA 90 bp CGCAACCTGACCCAGTCGGAGCTGAGGCCGCAGCGGCCACAGTACTaGCCTGGTGCCGGGTCCCAGCCTCTCCCGGGAAGGGAAGGGAAA +
Preference number: 5 (lower is better)
Translates to: RNLTQSELRPQRPQY*PGAGSQPLPGREGK
Trigger: TTTCCCTTCCCTTCCCGGGAGAGGCTGGGACCCGGCACCAGGGCAGTACTGTGGCCGCTGCGGCCTCAGCTCCGACTGGGTCAGGTTGCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345093.9
ENST00000394013.6
CDS-3UTR CAA 90 bp TGCTCCGCCAGCTGGTGTTTGTGTTCAGCTGACGTCTTCTCCAGCTCTGCGATGACAGGCCGCTTCGGGTaGTGCTCACAGTCGCTGAGG +
Preference number: 5 (lower is better)
Translates to: CSASWCLCSADVFSSSAMTGRFG*CSQSLR
Trigger: CCTCAGCGACTGTGAGCACAACCCGAAGCGGCCTGT...CATCGCAGAGCTGGAGAAGACGTCAGCTGAACACAAACACCAGCTGGCGGAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549119.1
CDS TCA 90 bp CTGGATGTCTCGCTTCTGCTCCGCCAGCTGGTGTTTGTGTTCAGCTaGCGTCTTCTCCAGCTCTGCGATGCGTGTCTGCTGCTGCTGTAC +
Preference number: 5 (lower is better)
Translates to: LDVSLLLRQLVFVFS*RLLQLCDACLLLLY
Trigger: GTACAGCAGCAGCAGACACGCATCGCAGAGCTGGAGAAGACGTCAGCTGAACACAAACACCAGCTGGCGGAGCAGAAGCGAGACATCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000548120.1
ENST00000549038.5
ENST00000551711.5
ENST00000552244.5
ENST00000552656.5
ENST00000615206.4
CDS-3UTR CAA 90 bp ACAGTCGCTGAGGTGAGACATGAGGTTGTCAAGCCGGACAACGGCACTACAGCCCAGCCGAACACAGCGTaGTCACAGGCAATCTGCAGC +
Preference number: 5 (lower is better)
Translates to: TVAEVRHEVVKPDNGTTAQPNTA*SQAICS
Trigger: GCTGCAGATTGCCTGTGACAACGCTGTGTTCGGCTG...GGCTGTAGTGCCGTTGTCCGGCTTGACAACCTCATGTCTCACCTCAGCGACTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549119.1
CDS-3UTR CAA 90 bp ACAGTCGCTGAGGTGAGACATGAGGTTGTCAAGCCGGACAACGGCACTACAGCCTTGGGCAGCTCATCTTaGGGCATCTCCAGGCCACAG +
Preference number: 5 (lower is better)
Translates to: TVAEVRHEVVKPDNGTTALGSSS*GISRPQ
Trigger: CTGTGGCCTGGAGATGCCCAAAGATGAGCTGCCCAA...GGCTGTAGTGCCGTTGTCCGGCTTGACAACCTCATGTCTCACCTCAGCGACTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549119.1
CDS CCA 90 bp GGTTGGGCAGCTCATCTTTGGGCATCTCCAGGCTGCAGACCAGGGTaGGGAAAGAGCAGAACAGAGGTGATCCCTGGGACATGTATGCAA +
Preference number: 5 (lower is better)
Translates to: GWAAHLWASPGCRPG*GKSRTEVIPGTCMQ
Trigger: TTGCATACATGTCCCAGGGATCACCTCTGTTCTGCTCTTTCCCCACCCTGGTCTGCAGCCTGGAGATGCCCAAAGATGAGCTGCCCAACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548120.1
CDS CCA 90 bp GTCTGCTGCTGCTGTACCACTGAGCGCAGGTGCTTAATGCAGTTATaGTTGGGCAGCTCATCTTTGGGCATCTCCAGGCTGCAGACCAGG +
Preference number: 5 (lower is better)
Translates to: VCCCCTTERRCLMQL*LGSSSLGISRLQTR
Trigger: CCTGGTCTGCAGCCTGGAGATGCCCAAAGATGAGCTGCCCAACCATAACTGCATTAAGCACCTGCGCTCAGTGGTACAGCAGCAGCAGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548120.1
CDS-3UTR CAA 90 bp GAGGTGAGACATGAGGTTGTCAAGCCGGACAACGGCACTACAGCCGAACACAGCTCCGCCAGCTGGTGTTaGTGTTCAGCTGACGTCTTC +
Preference number: 5 (lower is better)
Translates to: EVRHEVVKPDNGTTAEHSSASWC*CSADVF
Trigger: GAAGACGTCAGCTGAACACAAACACCAGCTGGCGGA...GCTGTGTTCGGCTGTAGTGCCGTTGTCCGGCTTGACAACCTCATGTCTCACCTC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549119.1
CDS-3UTR CAA 90 bp TTGGCACAGAGGTCCAGTCTTTCCCTAAGGGCCATCAGTGATGGCCAATTAACGACGACAACAGCCTGCTaGCCAGGGATGCGCTTGGCC +
Preference number: 5 (lower is better)
Translates to: LAQRSSLSLRAISDGQLTTTTAC*PGMRLA
Trigger: GGCCAAGCGCATCCCTGGCAAGCAGGCTGTTGTCGT...CGTTAATTGGCCATCACTGATGGCCCTTAGGGAAAGACTGGACCTCTGTGCCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
CDS-3UTR CAA 90 bp GGGCCTACCTGCTCCGCCAGCTGGTGTTTGTGTTCAGCTGACGTCTTCTCCAGCTTAATGCAGTTATGGTaGGGCAGCTCATCTTTGGGC +
Preference number: 5 (lower is better)
Translates to: GPTCSASWCLCSADVFSSLMQLW*GSSSLG
Trigger: GCCCAAAGATGAGCTGCCCAACCATAACTGCATTAA...GCTGGAGAAGACGTCAGCTGAACACAAACACCAGCTGGCGGAGCAGGTAGGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549119.1
CDS TCA 90 bp TGGGCGACCGTCACAACACTACGGTCCACTGGACATGTCTGTTGCTaGGAGAACCACTGGGTGATGCAGGCGTTGCAGAAAGCATGTTCA +
Preference number: 5 (lower is better)
Translates to: WATVTTLRSTGHVCC*ENHWVMQALQKACS
Trigger: TGAACATGCTTTCTGCAACGCCTGCATCACCCAGTGGTTCTCTCAGCAACAGACATGTCCAGTGGACCGTAGTGTTGTGACGGTCGCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000548225.1
ENST00000549038.5
ENST00000549119.1
ENST00000550379.1
ENST00000551711.5
ENST00000552244.5
ENST00000552656.5
ENST00000615206.4
CDS TCA 90 bp ACCTCCTCAGCTAGTGAGGAGGGCAGCCAGAGACAGGGGCATAAATaGGATGGCCCTTATCCATGTGGGGCAGAAGGGAACAAATCTCAC +
Preference number: 5 (lower is better)
Translates to: TSSASEEGSQRQGHK*DGPYPCGAEGNKSH
Trigger: GTGAGATTTGTTCCCTTCTGCCCCACATGGATAAGGGCCATCTCATTTATGCCCCTGTCTCTGGCTGCCCTCCTCACTAGCTGAGGAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548225.1
CDS-3UTR CAA 90 bp TGTCAAGCCGGACAACGGCACTACAGCCGAACACAGCGTTGTCACAGGCAATCTCACTGGACATGTCTGTaGCTGAGAGAACCACTGGGT +
Preference number: 5 (lower is better)
Translates to: CQAGQRHYSRTQRCHRQSHWTCL*LREPLG
Trigger: ACCCAGTGGTTCTCTCAGCAACAGACATGTCCAGTG...AGATTGCCTGTGACAACGCTGTGTTCGGCTGTAGTGCCGTTGTCCGGCTTGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549119.1
CDS-3UTR CAA 90 bp TCTGGAAATTTTCAGTATCCCAACCTGCATACTGGTAGACCCAGTGGGTGCCTAACAGGCCGCTTCGGGTaGTGCTCACAGTCGCTGAGG +
Preference number: 5 (lower is better)
Translates to: SGNFQYPNLHTGRPSGCLTGRFG*CSQSLR
Trigger: CCTCAGCGACTGTGAGCACAACCCGAAGCGGCCTGT...TAGGCACCCACTGGGTCTACCAGTATGCAGGTTGGGATACTGAAAATTTCCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
CDS-3UTR CAA 90 bp TCATCTGGAAATTTTCAGTATCCCAACCTGCATACTGGTAGACCCAGTGGGTGCACAGGCCGCTTCGGGTaGTGCTCACAGTCGCTGAGG +
Preference number: 5 (lower is better)
Translates to: SSGNFQYPNLHTGRPSGCTGRFG*CSQSLR
Trigger: CCTCAGCGACTGTGAGCACAACCCGAAGCGGCCTGT...GCACCCACTGGGTCTACCAGTATGCAGGTTGGGATACTGAAAATTTCCAGATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
CDS-3UTR CAA 90 bp TTGGCACAGAGGTCCAGTCTTTCCCTAAGGGCCATCAGTGATGGCCAATTAACGTTGGGCAGCTCATCTTaGGGCATCTCCAGGCCACAG +
Preference number: 5 (lower is better)
Translates to: LAQRSSLSLRAISDGQLTLGSSS*GISRPQ
Trigger: CTGTGGCCTGGAGATGCCCAAAGATGAGCTGCCCAA...CGTTAATTGGCCATCACTGATGGCCCTTAGGGAAAGACTGGACCTCTGTGCCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
CDS-3UTR CAA 90 bp GCTCATCTGGAAATTTTCAGTATCCCAACCTGCATACTGGTAGACCCAGTGGGTACGACAACAGCCTGCTaGCCAGGGATGCGCTTGGCC +
Preference number: 5 (lower is better)
Translates to: AHLEIFSIPTCILVDPVGTTTAC*PGMRLA
Trigger: GGCCAAGCGCATCCCTGGCAAGCAGGCTGTTGTCGT...ACCCACTGGGTCTACCAGTATGCAGGTTGGGATACTGAAAATTTCCAGATGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
CDS-3UTR CAA 90 bp AAGGCCTGGCTCTTGCACCATGTCATCCCCCATGTGCTGGTTCTCACAGGCCATGCTAGGAGTAGCTTCTaGCTAAACACATCAACCCCC +
Preference number: 5 (lower is better)
Translates to: KAWLLHHVIPHVLVLTGHARSSF*LNTSTP
Trigger: GGGGGTTGATGTGTTTAGCAAGAAGCTACTCCTAGC...ATGGCCTGTGAGAACCAGCACATGGGGGATGACATGGTGCAAGAGCCAGGCCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000547967.5
CDS-3UTR CAA 90 bp AGGTACTGGGCGCAGATGGGCGACCGTCACAACACTACGGTCCACTGGACATGTAGCTTCTCCTCATACTaGCCCCAGGATGATACAACT +
Preference number: 5 (lower is better)
Translates to: RYWAQMGDRHNTTVHWTCSFSSY*PQDDTT
Trigger: AGTTGTATCATCCTGGGGCAAGTATGAGGAGAAGCT...ACATGTCCAGTGGACCGTAGTGTTGTGACGGTCGCCCATCTGCGCCCAGTACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549119.1
CDS TCA 90 bp CTGTTCACAAGGCTCCAACCCCCTGATGCCTCCACTCAGTGCCACTaGAGAGATTCTCCCAGTAACCCATCTTGTTGGCTATTCTCCGAC +
Preference number: 5 (lower is better)
Translates to: LFTRLQPPDASTQCH*RDSPSNPSCWLFSD
Trigger: GTCGGAGAATAGCCAACAAGATGGGTTACTGGGAGAATCTCTTCAGTGGCACTGAGTGGAGGCATCAGGGGGTTGGAGCCTTGTGAACAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000548225.1
ENST00000549038.5
ENST00000549119.1
ENST00000552656.5
ENST00000615206.4
CDS TCA 90 bp CATCTCCAGGCTGCAGACCAGGGTGGGGAAAGAGCAGAACAGAGGTaGTCCCTGGGACATGTATGCAAATGGCCTATTCTGTGGCAGATA +
Preference number: 5 (lower is better)
Translates to: HLQAADQGGERAEQR*SLGHVCKWPILWQI
Trigger: TATCTGCCACAGAATAGGCCATTTGCATACATGTCCCAGGGATCACCTCTGTTCTGCTCTTTCCCCACCCTGGTCTGCAGCCTGGAGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548120.1
CDS-3UTR CAA 90 bp GGGAAGCACACAGTTCAGATCACTAGAGAGCTTTGGCTGCTACAGAACAGGAGATTGGGCAGCTCATCTTaGGGCATCTCCAGGCCACAG +
Preference number: 5 (lower is better)
Translates to: GKHTVQITRELWLLQNRRLGSSS*GISRPQ
Trigger: CTGTGGCCTGGAGATGCCCAAAGATGAGCTGCCCAA...TCTCCTGTTCTGTAGCAGCCAAAGCTCTCTAGTGATCTGAACTGTGTGCTTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345093.9
ENST00000615206.4
CDS-3UTR CAA 90 bp AAGGCCTGGCTCTTGCACCATGTCATCCCCCATGTGCTGGTTCTCACAGGCCATTTAATGCAGTTATGGTaGGGCAGCTCATCTTTGGGC +
Preference number: 5 (lower is better)
Translates to: KAWLLHHVIPHVLVLTGHLMQLW*GSSSLG
Trigger: GCCCAAAGATGAGCTGCCCAACCATAACTGCATTAA...ATGGCCTGTGAGAACCAGCACATGGGGGATGACATGGTGCAAGAGCCAGGCCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000547967.5
CDS-3UTR CAA 90 bp TTGGCACAGAGGTCCAGTCTTTCCCTAAGGGCCATCAGTGATGGCCAATTAACGTCCGCCAGCTGGTGTTaGTGTTCAGCTGACGTCTTC +
Preference number: 5 (lower is better)
Translates to: LAQRSSLSLRAISDGQLTSASWC*CSADVF
Trigger: GAAGACGTCAGCTGAACACAAACACCAGCTGGCGGA...CGTTAATTGGCCATCACTGATGGCCCTTAGGGAAAGACTGGACCTCTGTGCCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
CDS-3UTR CAA 90 bp CATCTGGAAATTTTCAGTATCCCAACCTGCATACTGGTAGACCCAGTGGGTGCCTCCACCAGGGAGCGCTaGATTACAGCCTGGAGCACA +
Preference number: 5 (lower is better)
Translates to: HLEIFSIPTCILVDPVGASTRER*ITAWST
Trigger: TGTGCTCCAGGCTGTAATCAAGCGCTCCCTGGTGGA...GGCACCCACTGGGTCTACCAGTATGCAGGTTGGGATACTGAAAATTTCCAGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
CDS-3UTR CAA 90 bp GGAAAATGGATGGAGGTGGGGGCTTTCCCACCCAGACTGATAATTTATAGACATACGACAACAGCCTGCTaGCCAGGGATGCGCTTGGCC +
Preference number: 5 (lower is better)
Translates to: GKWMEVGAFPPRLIIYRHTTTAC*PGMRLA
Trigger: GGCCAAGCGCATCCCTGGCAAGCAGGCTGTTGTCGT...ATGTCTATAAATTATCAGTCTGGGTGGGAAAGCCCCCACCTCCATCCATTTTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
CDS-3UTR CAA 90 bp ATGGGCGACCGTCACAACACTACGGTCCACTGGACATGTCTGTTGCTGAGAGAATGGGTGATGCAGGCGTaGCAGAAAGCATGTTCACAA +
Preference number: 5 (lower is better)
Translates to: MGDRHNTTVHWTCLLLREWVMQA*QKACSQ
Trigger: TTGTGAACATGCTTTCTGCAACGCCTGCATCACCCA...TTCTCTCAGCAACAGACATGTCCAGTGGACCGTAGTGTTGTGACGGTCGCCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549119.1
CDS-3UTR CAA 90 bp TTCCAGAGGGCACAGGCATCGATGCTGGACTGTCATATCCTTCACAGGAAGAGACACTGGACATGTCTGTaGCTGAGAGAACCACTGGGT +
Preference number: 5 (lower is better)
Translates to: FQRAQASMLDCHILHRKRHWTCL*LREPLG
Trigger: ACCCAGTGGTTCTCTCAGCAACAGACATGTCCAGTG...TCTCTTCCTGTGAAGGATATGACAGTCCAGCATCGATGCCTGTGCCCTCTGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345093.9
ENST00000615206.4
CDS-3UTR CAA 90 bp GGAAGCTCCTCATTTCAGTTGGGGTTACAGAGGTTTGGGGCAGATATCGTAAGTCAGCCGAACACAGCGTaGTCACAGGCAATCTGCAGC +
Preference number: 5 (lower is better)
Translates to: GSSSFQLGLQRFGADIVSQPNTA*SQAICS
Trigger: GCTGCAGATTGCCTGTGACAACGCTGTGTTCGGCTG...ACTTACGATATCTGCCCCAAACCTCTGTAACCCCAACTGAAATGAGGAGCTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345093.9
ENST00000615206.4
CDS-3UTR CAA 90 bp TCTGGAAATTTTCAGTATCCCAACCTGCATACTGGTAGACCCAGTGGGTGCCTACAGCCGAACACAGCGTaGTCACAGGCAATCTGCAGC +
Preference number: 5 (lower is better)
Translates to: SGNFQYPNLHTGRPSGCLQPNTA*SQAICS
Trigger: GCTGCAGATTGCCTGTGACAACGCTGTGTTCGGCTG...TAGGCACCCACTGGGTCTACCAGTATGCAGGTTGGGATACTGAAAATTTCCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
CDS-3UTR CAA 90 bp GCTCATCTGGAAATTTTCAGTATCCCAACCTGCATACTGGTAGACCCAGTGGGTTCCACCAGGGAGCGCTaGATTACAGCCTGGAGCACA +
Preference number: 5 (lower is better)
Translates to: AHLEIFSIPTCILVDPVGSTRER*ITAWST
Trigger: TGTGCTCCAGGCTGTAATCAAGCGCTCCCTGGTGGA...ACCCACTGGGTCTACCAGTATGCAGGTTGGGATACTGAAAATTTCCAGATGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
CDS GCA 90 bp AGTAAGATCTTAGAGCAGGAAGCCAAGGAGGCTAAGAATACTCCTTaGCAACATGCCAAAGAGACCTCCTCAGCTAGTGAGGAGGGCAGC +
Preference number: 5 (lower is better)
Translates to: SKILEQEAKEAKNTP*QHAKETSSASEEGS
Trigger: GCTGCCCTCCTCACTAGCTGAGGAGGTCTCTTTGGCATGTTGGCAAGGAGTATTCTTAGCCTCCTTGGCTTCCTGCTCTAAGATCTTACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548225.1
CDS-3UTR CAA 90 bp TTCCAGAGGGCACAGGCATCGATGCTGGACTGTCATATCCTTCACAGGAAGAGATGGGTGATGCAGGCGTaGCAGAAAGCATGTTCACAA +
Preference number: 5 (lower is better)
Translates to: FQRAQASMLDCHILHRKRWVMQA*QKACSQ
Trigger: TTGTGAACATGCTTTCTGCAACGCCTGCATCACCCA...TCTCTTCCTGTGAAGGATATGACAGTCCAGCATCGATGCCTGTGCCCTCTGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345093.9
ENST00000615206.4
CDS-3UTR CAA 90 bp AGGAGTAGCTTCTTGCTAAACACATCAACCCCCAACAGATTAACCCCTACCCTACAGCCGAACACAGCGTaGTCACAGGCAATCTGCAGC +
Preference number: 5 (lower is better)
Translates to: RSSFLLNTSTPNRLTPTLQPNTA*SQAICS
Trigger: GCTGCAGATTGCCTGTGACAACGCTGTGTTCGGCTG...TAGGGTAGGGGTTAATCTGTTGGGGGTTGATGTGTTTAGCAAGAAGCTACTCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
CDS-3UTR CAA 90 bp CCTGATAGCCAGTCGAGTTCTCTTATATCTCTTCCACGCCATGCGCAAATATCACAGCCGAACACAGCGTaGTCACAGGCAATCTGCAGC +
Preference number: 5 (lower is better)
Translates to: PDSQSSSLISLPRHAQISQPNTA*SQAICS
Trigger: GCTGCAGATTGCCTGTGACAACGCTGTGTTCGGCTG...TGATATTTGCGCATGGCGTGGAAGAGATATAAGAGAACTCGACTGGCTATCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547967.5
CDS-3UTR CAA 90 bp GACATGGAATTTAGGATAAAGGCAGACCCTGGGAAGCACACAGTTCAGATCACTTTGGGCAGCTCATCTTaGGGCATCTCCAGGCCACAG +
Preference number: 5 (lower is better)
Translates to: DMEFRIKADPGKHTVQITLGSSS*GISRPQ
Trigger: CTGTGGCCTGGAGATGCCCAAAGATGAGCTGCCCAA...AGTGATCTGAACTGTGTGCTTCCCAGGGTCTGCCTTTATCCTAAATTCCATGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345093.9
ENST00000615206.4
CDS-3UTR CAA 90 bp ACACCTTTAAGGTGGGCTGAACAGGGATACTGCTTGGCACAGAGGTCCAGTCTTGCTAGGAGTAGCTTCTaGCTAAACACATCAACCCCC +
Preference number: 5 (lower is better)
Translates to: TPLRWAEQGYCLAQRSSLARSSF*LNTSTP
Trigger: GGGGGTTGATGTGTTTAGCAAGAAGCTACTCCTAGC...AAGACTGGACCTCTGTGCCAAGCAGTATCCCTGTTCAGCCCACCTTAAAGGTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
CDS-3UTR CAA 90 bp AGGTCCAGTCTTTCCCTAAGGGCCATCAGTGATGGCCAATTAACGGCCTCACTACAGCCGAGGACTCCCTaGGCTCTTCCTATATTAAAG +
Preference number: 5 (lower is better)
Translates to: RSSLSLRAISDGQLTASLQPRTP*ALPILK
Trigger: CTTTAATATAGGAAGAGCCAAGGGAGTCCTCGGCTG...TAGTGAGGCCGTTAATTGGCCATCACTGATGGCCCTTAGGGAAAGACTGGACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345093.9
ENST00000615206.4
CDS-3UTR CAA 90 bp CTGGAAATTTTCAGTATCCCAACCTGCATACTGGTAGACCCAGTGGGTGCCTACTGGGTGATGCAGGCGTaGCAGAAAGCATGTTCACAA +
Preference number: 5 (lower is better)
Translates to: LEIFSIPTCILVDPVGAYWVMQA*QKACSQ
Trigger: TTGTGAACATGCTTTCTGCAACGCCTGCATCACCCA...GTAGGCACCCACTGGGTCTACCAGTATGCAGGTTGGGATACTGAAAATTTCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
CDS-3UTR CAA 90 bp GACATGGAATTTAGGATAAAGGCAGACCCTGGGAAGCACACAGTTCAGATCACTTCCGCCAGCTGGTGTTaGTGTTCAGCTGACGTCTTC +
Preference number: 5 (lower is better)
Translates to: DMEFRIKADPGKHTVQITSASWC*CSADVF
Trigger: GAAGACGTCAGCTGAACACAAACACCAGCTGGCGGA...AGTGATCTGAACTGTGTGCTTCCCAGGGTCTGCCTTTATCCTAAATTCCATGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345093.9
ENST00000615206.4
CDS-3UTR CAA 90 bp GCTCATCTGGAAATTTTCAGTATCCCAACCTGCATACTGGTAGACCCAGTGGGTGAACAGGGATACTGCTaGGCACAGAGGTCCAGTCTT +
Preference number: 5 (lower is better)
Translates to: AHLEIFSIPTCILVDPVGEQGYC*AQRSSL
Trigger: AAGACTGGACCTCTGTGCCAAGCAGTATCCCTGTTC...ACCCACTGGGTCTACCAGTATGCAGGTTGGGATACTGAAAATTTCCAGATGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
CDS TCA 90 bp TCTCGTTGTATTCAATTGTCTCCTCCAGGTTCTGAAGGTTGGGGTTaGCACTGCGGATTGCACGCATGTATGCCTTTAGCAGCTGGATGT +
Preference number: 5 (lower is better)
Translates to: SRCIQLSPPGSEGWG*HCGLHACMPLAAGC
Trigger: ACATCCAGCTGCTAAAGGCATACATGCGTGCAATCCGCAGTGTCAACCCCAACCTTCAGAACCTGGAGGAGACAATTGAATACAACGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000548120.1
ENST00000551711.5
ENST00000552244.5
ENST00000552656.5
ENST00000615206.4
CDS TCA 90 bp ACCCACTCTAGGATCTCGTTGTATTCAATTGTCTCCTCCAGGTTCTaGAGGTTGGGGTTGACACTGCGGATTGCACGCATGTATGCCTTT +
Preference number: 5 (lower is better)
Translates to: THSRISLYSIVSSRF*RLGLTLRIARMYAF
Trigger: AAAGGCATACATGCGTGCAATCCGCAGTGTCAACCCCAACCTTCAGAACCTGGAGGAGACAATTGAATACAACGAGATCCTAGAGTGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000548120.1
ENST00000551711.5
ENST00000552656.5
ENST00000615206.4
CDS-3UTR CAA 90 bp TGGATGGAGGTGGGGGCTTTCCCACCCAGACTGATAATTTATAGACATTTTAGGCACTGGACATGTCTGTaGCTGAGAGAACCACTGGGT +
Preference number: 5 (lower is better)
Translates to: WMEVGAFPPRLIIYRHFRHWTCL*LREPLG
Trigger: ACCCAGTGGTTCTCTCAGCAACAGACATGTCCAGTG...CCTAAAATGTCTATAAATTATCAGTCTGGGTGGGAAAGCCCCCACCTCCATCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
CDS-3UTR CAA 90 bp AACCAGAGTAAGTATAGCAGCGTTTTCAAATTCCTGAGCACAATGTCCCAGAGCTCCGCCAGCTGGTGTTaGTGTTCAGCTGACGTCTTC +
Preference number: 5 (lower is better)
Translates to: NQSKYSSVFKFLSTMSQSSASWC*CSADVF
Trigger: GAAGACGTCAGCTGAACACAAACACCAGCTGGCGGA...GCTCTGGGACATTGTGCTCAGGAATTTGAAAACGCTGCTATACTTACTCTGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345093.9
ENST00000615206.4
CDS-3UTR CAA 90 bp TTCCAGAGGGCACAGGCATCGATGCTGGACTGTCATATCCTTCACAGGAAGAGACACTCTAGGATCTCGTaGTATTCAATTGTCTCCTCC +
Preference number: 5 (lower is better)
Translates to: FQRAQASMLDCHILHRKRHSRIS*YSIVSS
Trigger: GGAGGAGACAATTGAATACAACGAGATCCTAGAGTG...TCTCTTCCTGTGAAGGATATGACAGTCCAGCATCGATGCCTGTGCCCTCTGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345093.9
ENST00000615206.4
CDS-3UTR CAA 90 bp GGCAGTGCCAACCATATTTTAGCAAAAGCTAGGAGTAGCTTCTTGCTAAACACATCCACCAGGGAGCGCTaGATTACAGCCTGGAGCACA +
Preference number: 5 (lower is better)
Translates to: GSANHILAKARSSFLLNTSTRER*ITAWST
Trigger: TGTGCTCCAGGCTGTAATCAAGCGCTCCCTGGTGGA...TGTGTTTAGCAAGAAGCTACTCCTAGCTTTTGCTAAAATATGGTTGGCACTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
CDS-3UTR CAA 90 bp CAATGGCCAAAGAAAATTATCAAAGTAACTAACTACAGTCACAGGGCTAGAGAGACGACAACAGCCTGCTaGCCAGGGATGCGCTTGGCC +
Preference number: 5 (lower is better)
Translates to: QWPKKIIKVTNYSHRARETTTAC*PGMRLA
Trigger: GGCCAAGCGCATCCCTGGCAAGCAGGCTGTTGTCGT...CTCTCTAGCCCTGTGACTGTAGTTAGTTACTTTGATAATTTTCTTTGGCCATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
CDS-3UTR CAA 90 bp AGCCATTACATGGTGGGGAGGAGCCTTTCTATCTCCAACCACACTCCCACCTCCCTTATTTCTAGAGATTaGGCTCCACCCTTACCATTT +
Preference number: 5 (lower is better)
Translates to: SHYMVGRSLSISNHTPTSLISRD*APPLPF
Trigger: AAATGGTAAGGGTGGAGCCAAATCTCTAGAAATAAG...GGAGGTGGGAGTGTGGTTGGAGATAGAAAGGCTCCTCCCCACCATGTAATGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345093.9
ENST00000615206.4
CDS-3UTR CAA 90 bp TGGATGGAGGTGGGGGCTTTCCCACCCAGACTGATAATTTATAGACATTTTAGGGAACAGGGATACTGCTaGGCACAGAGGTCCAGTCTT +
Preference number: 5 (lower is better)
Translates to: WMEVGAFPPRLIIYRHFREQGYC*AQRSSL
Trigger: AAGACTGGACCTCTGTGCCAAGCAGTATCCCTGTTC...CCTAAAATGTCTATAAATTATCAGTCTGGGTGGGAAAGCCCCCACCTCCATCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
CDS-3UTR CAA 90 bp AGGAGTAGCTTCTTGCTAAACACATCAACCCCCAACAGATTAACCCCTACCCTAGAACAGGGATACTGCTaGGCACAGAGGTCCAGTCTT +
Preference number: 5 (lower is better)
Translates to: RSSFLLNTSTPNRLTPTLEQGYC*AQRSSL
Trigger: AAGACTGGACCTCTGTGCCAAGCAGTATCCCTGTTC...TAGGGTAGGGGTTAATCTGTTGGGGGTTGATGTGTTTAGCAAGAAGCTACTCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
CDS-3UTR CAA 90 bp TCATCTGGAAATTTTCAGTATCCCAACCTGCATACTGGTAGACCCAGTGGGTGCGCTAGGAGTAGCTTCTaGCTAAACACATCAACCCCC +
Preference number: 5 (lower is better)
Translates to: SSGNFQYPNLHTGRPSGCARSSF*LNTSTP
Trigger: GGGGGTTGATGTGTTTAGCAAGAAGCTACTCCTAGC...GCACCCACTGGGTCTACCAGTATGCAGGTTGGGATACTGAAAATTTCCAGATGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
CDS-3UTR CAA 90 bp AAACACATCAACCCCCAACAGATTAACCCCTACCCTAAACCCTGGCATTCCCTAGCTAGGAGTAGCTTCTaGCTAAACACATCAACCCCC +
Preference number: 5 (lower is better)
Translates to: KHINPQQINPYPKPWHSLARSSF*LNTSTP
Trigger: GGGGGTTGATGTGTTTAGCAAGAAGCTACTCCTAGC...TAGGGAATGCCAGGGTTTAGGGTAGGGGTTAATCTGTTGGGGGTTGATGTGTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
CDS-3UTR CAA 90 bp TCAGCCGAGGACTCCCTTGGCTCTTCCTATATTAAAGCCAAAGGTTGTGCTGAAAGCTCCTCATTTCAGTaGGGGTTACAGAGGTTTGGG +
Preference number: 5 (lower is better)
Translates to: SAEDSLGSSYIKAKGCAESSSFQ*GLQRFG
Trigger: CCCAAACCTCTGTAACCCCAACTGAAATGAGGAGCT...TTCAGCACAACCTTTGGCTTTAATATAGGAAGAGCCAAGGGAGTCCTCGGCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345093.9
ENST00000615206.4
CDS TCA 90 bp ACTCACTCTAGGATCTCGTTGTATTCAATTGTCTCCTCCAGGTTCTaGAGGTTGGGGTTGACACTGCGGATTGCACGCATGTATGCCTTT +
Preference number: 5 (lower is better)
Translates to: THSRISLYSIVSSRF*RLGLTLRIARMYAF
Trigger: AAAGGCATACATGCGTGCAATCCGCAGTGTCAACCCCAACCTTCAGAACCTGGAGGAGACAATTGAATACAACGAGATCCTAGAGTGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552244.5
CDS TCA 90 bp AGCTACTCTAGGATCTCGTTGTATTCAATTGTCTCCTCCAGGTTCTaGAGGTTGGGGTTGACACTGCGGATTGCACGCATGTATGCCTTT +
Preference number: 5 (lower is better)
Translates to: SYSRISLYSIVSSRF*RLGLTLRIARMYAF
Trigger: AAAGGCATACATGCGTGCAATCCGCAGTGTCAACCCCAACCTTCAGAACCTGGAGGAGACAATTGAATACAACGAGATCCTAGAGTAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547967.5
CDS CCA 90 bp CATACTTGCCCCAGGATGATACAACTGACTCTGGTCTGGCAAGGCTaGCAGAGAAATGACCTATTGAAGGTGGCAGCTTTCACATCAAAA +
Preference number: 5 (lower is better)
Translates to: HTCPRMIQLTLVWQG*QRNDLLKVAAFTSK
Trigger: TTTTGATGTGAAAGCTGCCACCTTCAATAGGTCATTTCTCTGCCAGCCTTGCCAGACCAGAGTCAGTTGTATCATCCTGGGGCAAGTATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394013.6
ENST00000547967.5
ENST00000550379.1
CDS-3UTR CAA 90 bp GGAAAATGGATGGAGGTGGGGGCTTTCCCACCCAGACTGATAATTTATAGACATTGGGTGATGCAGGCGTaGCAGAAAGCATGTTCACAA +
Preference number: 5 (lower is better)
Translates to: GKWMEVGAFPPRLIIYRHWVMQA*QKACSQ
Trigger: TTGTGAACATGCTTTCTGCAACGCCTGCATCACCCA...ATGTCTATAAATTATCAGTCTGGGTGGGAAAGCCCCCACCTCCATCCATTTTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
CDS-3UTR CAA 90 bp AGGAGTAGCTTCTTGCTAAACACATCAACCCCCAACAGATTAACCCCTACCCTATGGGTGATGCAGGCGTaGCAGAAAGCATGTTCACAA +
Preference number: 5 (lower is better)
Translates to: RSSFLLNTSTPNRLTPTLWVMQA*QKACSQ
Trigger: TTGTGAACATGCTTTCTGCAACGCCTGCATCACCCA...TAGGGTAGGGGTTAATCTGTTGGGGGTTGATGTGTTTAGCAAGAAGCTACTCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
CDS-3UTR CAA 90 bp GGGGGAAAAGCACTGCTAATGTCACTAGGATACATACATTGCCTCTTATGCTCTCACTGGACATGTCTGTaGCTGAGAGAACCACTGGGT +
Preference number: 5 (lower is better)
Translates to: GGKALLMSLGYIHCLLCSHWTCL*LREPLG
Trigger: ACCCAGTGGTTCTCTCAGCAACAGACATGTCCAGTG...AGAGCATAAGAGGCAATGTATGTATCCTAGTGACATTAGCAGTGCTTTTCCCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000345093.9
ENST00000615206.4
CDS-3UTR CAA 90 bp ACACCTTTAAGGTGGGCTGAACAGGGATACTGCTTGGCACAGAGGTCCAGTCTTTCTCGTTGTATTCAATaGTCTCCTCCAGGTTCTGAA +
Preference number: 5 (lower is better)
Translates to: TPLRWAEQGYCLAQRSSLSRCIQ*SPPGSE
Trigger: TTCAGAACCTGGAGGAGACAATTGAATACAACGAGA...AAGACTGGACCTCTGTGCCAAGCAGTATCCCTGTTCAGCCCACCTTAAAGGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
CDS-3UTR CAA 90 bp TTGGCACAGAGGTCCAGTCTTTCCCTAAGGGCCATCAGTGATGGCCAATTAACGTTTTCAATCAGCTCGTaGACAATAGAAGCAGGACAG +
Preference number: 5 (lower is better)
Translates to: LAQRSSLSLRAISDGQLTFSISS*TIEAGQ
Trigger: CTGTCCTGCTTCTATTGTCAACGAGCTGATTGAAAA...CGTTAATTGGCCATCACTGATGGCCCTTAGGGAAAGACTGGACCTCTGTGCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
CDS-3UTR CAA 90 bp AAGGTGAGAGAAAGGCAAAAGCAGAGGGGAAACCTTCTCAAGAAAGGGAGTAATGAACAGGGATACTGCTaGGCACAGAGGTCCAGTCTT +
Preference number: 5 (lower is better)
Translates to: KVRERQKQRGNLLKKGSNEQGYC*AQRSSL
Trigger: AAGACTGGACCTCTGTGCCAAGCAGTATCCCTGTTC...ATTACTCCCTTTCTTGAGAAGGTTTCCCCTCTGCTTTTGCCTTTCTCTCACCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345093.9
ENST00000615206.4
CDS-3UTR CAA 90 bp GTAAGTTCAGCCGAGGACTCCCTTGGCTCTTCCTATATTAAAGCCAAAGGTTGTCAGCCGAGGACTCCCTaGGCTCTTCCTATATTAAAG +
Preference number: 5 (lower is better)
Translates to: VSSAEDSLGSSYIKAKGCQPRTP*ALPILK
Trigger: CTTTAATATAGGAAGAGCCAAGGGAGTCCTCGGCTG...ACAACCTTTGGCTTTAATATAGGAAGAGCCAAGGGAGTCCTCGGCTGAACTTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345093.9
ENST00000615206.4
CDS-3UTR CAA 90 bp GGAAAATGGATGGAGGTGGGGGCTTTCCCACCCAGACTGATAATTTATAGACATAGCTCCTCATTTCAGTaGGGGTTACAGAGGTTTGGG +
Preference number: 5 (lower is better)
Translates to: GKWMEVGAFPPRLIIYRHSSSFQ*GLQRFG
Trigger: CCCAAACCTCTGTAACCCCAACTGAAATGAGGAGCT...ATGTCTATAAATTATCAGTCTGGGTGGGAAAGCCCCCACCTCCATCCATTTTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000345093.9
ENST00000615206.4
CDS-3UTR CAA 90 bp TTGGCACAGAGGTCCAGTCTTTCCCTAAGGGCCATCAGTGATGGCCAATTAACGGGAGCTTTATCGTCCTaGGCTCACATATTACTAGTA +
Preference number: 5 (lower is better)
Translates to: LAQRSSLSLRAISDGQLTGALSS*AHILLV
Trigger: TACTAGTAATATGTGAGCCAAGGACGATAAAGCTCC...CGTTAATTGGCCATCACTGATGGCCCTTAGGGAAAGACTGGACCTCTGTGCCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345093.9
ENST00000615206.4
CDS GCA 90 bp TGGCAGAGAAATGACCTATTGAAGGTGGCAGCTTTCACATCAAAATaGAGAGTGCATGGCTGTATCAAAAGCTGGTCTGTACTGGCTCCT +
Preference number: 5 (lower is better)
Translates to: WQRNDLLKVAAFTSK*RVHGCIKSWSVLAP
Trigger: AGGAGCCAGTACAGACCAGCTTTTGATACAGCCATGCACTCTGCATTTTGATGTGAAAGCTGCCACCTTCAATAGGTCATTTCTCTGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394013.6
ENST00000547967.5
ENST00000550379.1
CDS-3UTR CAA 90 bp GGCAGTGCCAACCATATTTTAGCAAAAGCTAGGAGTAGCTTCTTGCTAAACACACACTGGACATGTCTGTaGCTGAGAGAACCACTGGGT +
Preference number: 5 (lower is better)
Translates to: GSANHILAKARSSFLLNTHWTCL*LREPLG
Trigger: ACCCAGTGGTTCTCTCAGCAACAGACATGTCCAGTG...TGTGTTTAGCAAGAAGCTACTCCTAGCTTTTGCTAAAATATGGTTGGCACTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
CDS-3UTR CAA 90 bp CAATGGCCAAAGAAAATTATCAAAGTAACTAACTACAGTCACAGGGCTAGAGAGTTGGGCAGCTCATCTTaGGGCATCTCCAGGCCACAG +
Preference number: 5 (lower is better)
Translates to: QWPKKIIKVTNYSHRARELGSSS*GISRPQ
Trigger: CTGTGGCCTGGAGATGCCCAAAGATGAGCTGCCCAA...CTCTCTAGCCCTGTGACTGTAGTTAGTTACTTTGATAATTTTCTTTGGCCATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
CDS-3UTR CAA 90 bp GTAAGTTCAGCCGAGGACTCCCTTGGCTCTTCCTATATTAAAGCCAAAGGTTGTTTAATGCAGTTATGGTaGGGCAGCTCATCTTTGGGC +
Preference number: 5 (lower is better)
Translates to: VSSAEDSLGSSYIKAKGCLMQLW*GSSSLG
Trigger: GCCCAAAGATGAGCTGCCCAACCATAACTGCATTAA...ACAACCTTTGGCTTTAATATAGGAAGAGCCAAGGGAGTCCTCGGCTGAACTTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345093.9
ENST00000615206.4
CDS-3UTR CAA 90 bp TCCCTAAGGGCCATCAGTGATGGCCAATTAACGGCCTCACTACTTATTTCTAGATTAATGCAGTTATGGTaGGGCAGCTCATCTTTGGGC +
Preference number: 5 (lower is better)
Translates to: SLRAISDGQLTASLLISRLMQLW*GSSSLG
Trigger: GCCCAAAGATGAGCTGCCCAACCATAACTGCATTAA...TCTAGAAATAAGTAGTGAGGCCGTTAATTGGCCATCACTGATGGCCCTTAGGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
CDS-3UTR CAA 90 bp CCAAAGAAAATTATCAAAGTAACTAACTACAGTCACAGGGCTAGAGAGGGGTCTTCCGCCAGCTGGTGTTaGTGTTCAGCTGACGTCTTC +
Preference number: 5 (lower is better)
Translates to: PKKIIKVTNYSHRAREGSSASWC*CSADVF
Trigger: GAAGACGTCAGCTGAACACAAACACCAGCTGGCGGA...AGACCCCTCTCTAGCCCTGTGACTGTAGTTAGTTACTTTGATAATTTTCTTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
CDS-3UTR CAA 90 bp CTGGAAATTTTCAGTATCCCAACCTGCATACTGGTAGACCCAGTGGGTGCCTACTCTCGTTGTATTCAATaGTCTCCTCCAGGTTCTGAA +
Preference number: 5 (lower is better)
Translates to: LEIFSIPTCILVDPVGAYSRCIQ*SPPGSE
Trigger: TTCAGAACCTGGAGGAGACAATTGAATACAACGAGA...GTAGGCACCCACTGGGTCTACCAGTATGCAGGTTGGGATACTGAAAATTTCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
CDS-3UTR CAA 90 bp GCTCATCTGGAAATTTTCAGTATCCCAACCTGCATACTGGTAGACCCAGTGGGTCACTCTAGGATCTCGTaGTATTCAATTGTCTCCTCC +
Preference number: 5 (lower is better)
Translates to: AHLEIFSIPTCILVDPVGHSRIS*YSIVSS
Trigger: GGAGGAGACAATTGAATACAACGAGATCCTAGAGTG...ACCCACTGGGTCTACCAGTATGCAGGTTGGGATACTGAAAATTTCCAGATGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000615206.4
CDS-3UTR CAA 90 bp AAACTTGTAGGAAAGAAGAGCTCATCTGGAAATTTTCAGTATCCCAACCTGCATTCCACCAGGGAGCGCTaGATTACAGCCTGGAGCACA +
Preference number: 5 (lower is better)
Translates to: KLVGKKSSSGNFQYPNLHSTRER*ITAWST
Trigger: TGTGCTCCAGGCTGTAATCAAGCGCTCCCTGGTGGA...ATGCAGGTTGGGATACTGAAAATTTCCAGATGAGCTCTTCTTTCCTACAAGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
CDS-3UTR CAA 90 bp AGGTCCAGTCTTTCCCTAAGGGCCATCAGTGATGGCCAATTAACGGCCTCACTACTAAAGCAAAGTTGCTaGTGGGACAAAGGAAAAAGA +
Preference number: 5 (lower is better)
Translates to: RSSLSLRAISDGQLTASLLKQSC*WDKGKR
Trigger: TCTTTTTCCTTTGTCCCACAAGCAACTTTGCTTTAG...TAGTGAGGCCGTTAATTGGCCATCACTGATGGCCCTTAGGGAAAGACTGGACCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000345093.9
ENST00000615206.4
CDS-3UTR CAA 90 bp ACACCTTTAAGGTGGGCTGAACAGGGATACTGCTTGGCACAGAGGTCCAGTCTTGATTCTAAAGCAAAGTaGCTTGTGGGACAAAGGAAA +
Preference number: 5 (lower is better)
Translates to: TPLRWAEQGYCLAQRSSLDSKAK*LVGQRK
Trigger: TTTCCTTTGTCCCACAAGCAACTTTGCTTTAGAATC...AAGACTGGACCTCTGTGCCAAGCAGTATCCCTGTTCAGCCCACCTTAAAGGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345093.9
ENST00000615206.4
CDS-3UTR CAA 90 bp CATCTGGAAATTTTCAGTATCCCAACCTGCATACTGGTAGACCCAGTGGGTGCCTACTCTAGGATCTCGTaGTATTCAATTGTCTCCTCC +
Preference number: 5 (lower is better)
Translates to: HLEIFSIPTCILVDPVGAYSRIS*YSIVSS
Trigger: GGAGGAGACAATTGAATACAACGAGATCCTAGAGTA...GGCACCCACTGGGTCTACCAGTATGCAGGTTGGGATACTGAAAATTTCCAGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547967.5
CDS-3UTR CAA 90 bp AGGAGTAGCTTCTTGCTAAACACATCAACCCCCAACAGATTAACCCCTACCCTACACTCTAGGATCTCGTaGTATTCAATTGTCTCCTCC +
Preference number: 5 (lower is better)
Translates to: RSSFLLNTSTPNRLTPTLHSRIS*YSIVSS
Trigger: GGAGGAGACAATTGAATACAACGAGATCCTAGAGTG...TAGGGTAGGGGTTAATCTGTTGGGGGTTGATGTGTTTAGCAAGAAGCTACTCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000615206.4
CDS-3UTR CAA 90 bp AAACACATCAACCCCCAACAGATTAACCCCTACCCTAAACCCTGGCATTCCCTAGATCCTCCAGGGAAATaGAATCTCTTTGTGCTTTCT +
Preference number: 5 (lower is better)
Translates to: KHINPQQINPYPKPWHSLDPPGK*NLFVLS
Trigger: AGAAAGCACAAAGAGATTCAATTTCCCTGGAGGATC...TAGGGAATGCCAGGGTTTAGGGTAGGGGTTAATCTGTTGGGGGTTGATGTGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
CDS-3UTR CAA 90 bp TTGGCACAGAGGTCCAGTCTTTCCCTAAGGGCCATCAGTGATGGCCAATTAACGACTAGGATACATACATaGCCTCTTATGCTCTATACT +
Preference number: 5 (lower is better)
Translates to: LAQRSSLSLRAISDGQLTTRIHT*PLMLYT
Trigger: AGTATAGAGCATAAGAGGCAATGTATGTATCCTAGT...CGTTAATTGGCCATCACTGATGGCCCTTAGGGAAAGACTGGACCTCTGTGCCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345093.9
ENST00000615206.4
CDS-3UTR CAA 90 bp TCAGCCGAGGACTCCCTTGGCTCTTCCTATATTAAAGCCAAAGGTTGTGCTGAAGGAGCTTTATCGTCCTaGGCTCACATATTACTAGTA +
Preference number: 5 (lower is better)
Translates to: SAEDSLGSSYIKAKGCAEGALSS*AHILLV
Trigger: TACTAGTAATATGTGAGCCAAGGACGATAAAGCTCC...TTCAGCACAACCTTTGGCTTTAATATAGGAAGAGCCAAGGGAGTCCTCGGCTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345093.9
ENST00000615206.4
CDS-3UTR CAA 90 bp TGGATGGAGGTGGGGGCTTTCCCACCCAGACTGATAATTTATAGACATTTTAGGCAGAGAAATGACCTATaGAAGGTGGCAGCTTTCACA +
Preference number: 5 (lower is better)
Translates to: WMEVGAFPPRLIIYRHFRQRNDL*KVAAFT
Trigger: TGTGAAAGCTGCCACCTTCAATAGGTCATTTCTCTG...CCTAAAATGTCTATAAATTATCAGTCTGGGTGGGAAAGCCCCCACCTCCATCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394013.6
ENST00000547967.5
CDS-3UTR CAA 90 bp TTGGCACAGAGGTCCAGTCTTTCCCTAAGGGCCATCAGTGATGGCCAATTAACGATACTTCGCTTGTTTTaGCTGCATTTTAGAGATCAC +
Preference number: 5 (lower is better)
Translates to: LAQRSSLSLRAISDGQLTILRLF*LHFRDH
Trigger: GTGATCTCTAAAATGCAGCAAAAACAAGCGAAGTAT...CGTTAATTGGCCATCACTGATGGCCCTTAGGGAAAGACTGGACCTCTGTGCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547967.5
CDS-3UTR CAA 90 bp TCCCTAAGGGCCATCAGTGATGGCCAATTAACGGCCTCACTACTTATTTCTAGATTTTCAATCAGCTCGTaGACAATAGAAGCAGGACAG +
Preference number: 5 (lower is better)
Translates to: SLRAISDGQLTASLLISRFSISS*TIEAGQ
Trigger: CTGTCCTGCTTCTATTGTCAACGAGCTGATTGAAAA...TCTAGAAATAAGTAGTGAGGCCGTTAATTGGCCATCACTGATGGCCCTTAGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
CDS-3UTR CAA 90 bp CATGATCCAACTACCCAGACCTGCAGCAAGCTAGCCTGGAATAAAATTCTGAGAGATCCTCCAGGGAAATaGAATCTCTTTGTGCTTTCT +
Preference number: 5 (lower is better)
Translates to: HDPTTQTCSKLAWNKILRDPPGK*NLFVLS
Trigger: AGAAAGCACAAAGAGATTCAATTTCCCTGGAGGATC...TCTCAGAATTTTATTCCAGGCTAGCTTGCTGCAGGTCTGGGTAGTTGGATCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345093.9
ENST00000615206.4
CDS-3UTR CAA 90 bp TCTGGAAATTTTCAGTATCCCAACCTGCATACTGGTAGACCCAGTGGGTGCCTACTTATTTCTAGAGATTaGGCTCCACCCTTACCATTT +
Preference number: 5 (lower is better)
Translates to: SGNFQYPNLHTGRPSGCLLISRD*APPLPF
Trigger: AAATGGTAAGGGTGGAGCCAAATCTCTAGAAATAAG...TAGGCACCCACTGGGTCTACCAGTATGCAGGTTGGGATACTGAAAATTTCCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
CDS-3UTR CAA 90 bp GCTCATCTGGAAATTTTCAGTATCCCAACCTGCATACTGGTAGACCCAGTGGGTCTTATTTCTAGAGATTaGGCTCCACCCTTACCATTT +
Preference number: 5 (lower is better)
Translates to: AHLEIFSIPTCILVDPVGLISRD*APPLPF
Trigger: AAATGGTAAGGGTGGAGCCAAATCTCTAGAAATAAG...ACCCACTGGGTCTACCAGTATGCAGGTTGGGATACTGAAAATTTCCAGATGAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
CDS-3UTR CAA 90 bp ACAAGAGGCAGTGCCAACCATATTTTAGCAAAAGCTAGGAGTAGCTTCTTGCTACAGAGAAATGACCTATaGAAGGTGGCAGCTTTCACA +
Preference number: 5 (lower is better)
Translates to: TRGSANHILAKARSSFLLQRNDL*KVAAFT
Trigger: TGTGAAAGCTGCCACCTTCAATAGGTCATTTCTCTG...TAGCAAGAAGCTACTCCTAGCTTTTGCTAAAATATGGTTGGCACTGCCTCTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394013.6
ENST00000547967.5
CDS-3UTR CAA 90 bp CCAAAGAAAATTATCAAAGTAACTAACTACAGTCACAGGGCTAGAGAGGGGTCTAGCTTCTCCTCATACTaGCCCCAGGATGATACAACT +
Preference number: 5 (lower is better)
Translates to: PKKIIKVTNYSHRAREGSSFSSY*PQDDTT
Trigger: AGTTGTATCATCCTGGGGCAAGTATGAGGAGAAGCT...AGACCCCTCTCTAGCCCTGTGACTGTAGTTAGTTACTTTGATAATTTTCTTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394013.6
ENST00000547967.5
CDS-3UTR CAA 90 bp CAATGGCCAAAGAAAATTATCAAAGTAACTAACTACAGTCACAGGGCTAGAGAGTTAATGCAGTTATGGTaGGGCAGCTCATCTTTGGGC +
Preference number: 5 (lower is better)
Translates to: QWPKKIIKVTNYSHRARELMQLW*GSSSLG
Trigger: GCCCAAAGATGAGCTGCCCAACCATAACTGCATTAA...CTCTCTAGCCCTGTGACTGTAGTTAGTTACTTTGATAATTTTCTTTGGCCATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
CDS-3UTR CAA 90 bp ACAAGAGGCAGTGCCAACCATATTTTAGCAAAAGCTAGGAGTAGCTTCTTGCTATCTCGTTGTATTCAATaGTCTCCTCCAGGTTCTGAA +
Preference number: 5 (lower is better)
Translates to: TRGSANHILAKARSSFLLSRCIQ*SPPGSE
Trigger: TTCAGAACCTGGAGGAGACAATTGAATACAACGAGA...TAGCAAGAAGCTACTCCTAGCTTTTGCTAAAATATGGTTGGCACTGCCTCTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
CDS-3UTR CAA 90 bp GGCAGTGCCAACCATATTTTAGCAAAAGCTAGGAGTAGCTTCTTGCTAAACACAGATCCTCCAGGGAAATaGAATCTCTTTGTGCTTTCT +
Preference number: 5 (lower is better)
Translates to: GSANHILAKARSSFLLNTDPPGK*NLFVLS
Trigger: AGAAAGCACAAAGAGATTCAATTTCCCTGGAGGATC...TGTGTTTAGCAAGAAGCTACTCCTAGCTTTTGCTAAAATATGGTTGGCACTGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
CDS-3UTR CAA 90 bp GGGGGAAAAGCACTGCTAATGTCACTAGGATACATACATTGCCTCTTATGCTCTGATTCTAAAGCAAAGTaGCTTGTGGGACAAAGGAAA +
Preference number: 5 (lower is better)
Translates to: GGKALLMSLGYIHCLLCSDSKAK*LVGQRK
Trigger: TTTCCTTTGTCCCACAAGCAACTTTGCTTTAGAATC...AGAGCATAAGAGGCAATGTATGTATCCTAGTGACATTAGCAGTGCTTTTCCCCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000345093.9
ENST00000615206.4
CDS-3UTR CAA 90 bp CAATGGCCAAAGAAAATTATCAAAGTAACTAACTACAGTCACAGGGCTAGAGAGAGCTTCTCCTCATACTaGCCCCAGGATGATACAACT +
Preference number: 5 (lower is better)
Translates to: QWPKKIIKVTNYSHRARESFSSY*PQDDTT
Trigger: AGTTGTATCATCCTGGGGCAAGTATGAGGAGAAGCT...CTCTCTAGCCCTGTGACTGTAGTTAGTTACTTTGATAATTTTCTTTGGCCATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394013.6
ENST00000547967.5
CDS-3UTR CAA 90 bp GGGAAAAGCACTGCTAATGTCACTAGGATACATACATTGCCTCTTATGCTCTATTTTTCAATCAGCTCGTaGACAATAGAAGCAGGACAG +
Preference number: 5 (lower is better)
Translates to: GKSTANVTRIHTLPLMLYFSISS*TIEAGQ
Trigger: CTGTCCTGCTTCTATTGTCAACGAGCTGATTGAAAA...ATAGAGCATAAGAGGCAATGTATGTATCCTAGTGACATTAGCAGTGCTTTTCCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000345093.9
ENST00000615206.4
CDS-3UTR CAA 90 bp GGGAAAAGCACTGCTAATGTCACTAGGATACATACATTGCCTCTTATGCTCTATGATCCTCCAGGGAAATaGAATCTCTTTGTGCTTTCT +
Preference number: 5 (lower is better)
Translates to: GKSTANVTRIHTLPLMLYDPPGK*NLFVLS
Trigger: AGAAAGCACAAAGAGATTCAATTTCCCTGGAGGATC...ATAGAGCATAAGAGGCAATGTATGTATCCTAGTGACATTAGCAGTGCTTTTCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345093.9
ENST00000615206.4
CDS-3UTR CAA 90 bp AAATGGATGGAGGTGGGGGCTTTCCCACCCAGACTGATAATTTATAGACATTTTCTTATTTCTAGAGATTaGGCTCCACCCTTACCATTT +
Preference number: 5 (lower is better)
Translates to: KWMEVGAFPPRLIIYRHFLISRD*APPLPF
Trigger: AAATGGTAAGGGTGGAGCCAAATCTCTAGAAATAAG...AAAATGTCTATAAATTATCAGTCTGGGTGGGAAAGCCCCCACCTCCATCCATTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
CDS-3UTR CAA 90 bp CAATGGCCAAAGAAAATTATCAAAGTAACTAACTACAGTCACAGGGCTAGAGAGTCTCGTTGTATTCAATaGTCTCCTCCAGGTTCTGAA +
Preference number: 5 (lower is better)
Translates to: QWPKKIIKVTNYSHRARESRCIQ*SPPGSE
Trigger: TTCAGAACCTGGAGGAGACAATTGAATACAACGAGA...CTCTCTAGCCCTGTGACTGTAGTTAGTTACTTTGATAATTTTCTTTGGCCATTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
CDS-3UTR CAA 90 bp CAATGGCCAAAGAAAATTATCAAAGTAACTAACTACAGTCACAGGGCTAGAGAGTTTTCAATCAGCTCGTaGACAATAGAAGCAGGACAG +
Preference number: 5 (lower is better)
Translates to: QWPKKIIKVTNYSHRAREFSISS*TIEAGQ
Trigger: CTGTCCTGCTTCTATTGTCAACGAGCTGATTGAAAA...CTCTCTAGCCCTGTGACTGTAGTTAGTTACTTTGATAATTTTCTTTGGCCATTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000615206.4
CDS-3UTR CAA 90 bp CAATGGCCAAAGAAAATTATCAAAGTAACTAACTACAGTCACAGGGCTAGAGAGCTAAAGCAAAGTTGCTaGTGGGACAAAGGAAAAAGA +
Preference number: 5 (lower is better)
Translates to: QWPKKIIKVTNYSHRARELKQSC*WDKGKR
Trigger: TCTTTTTCCTTTGTCCCACAAGCAACTTTGCTTTAG...CTCTCTAGCCCTGTGACTGTAGTTAGTTACTTTGATAATTTTCTTTGGCCATTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000345093.9
ENST00000615206.4
CDS-3UTR CAA 90 bp AATGTCACTAGGATACATACATTGCCTCTTATGCTCTATACTGTGACATGCTTAACTAGGATACATACATaGCCTCTTATGCTCTATACT +
Preference number: 5 (lower is better)
Translates to: NVTRIHTLPLMLYTVTCLTRIHT*PLMLYT
Trigger: AGTATAGAGCATAAGAGGCAATGTATGTATCCTAGT...TAAGCATGTCACAGTATAGAGCATAAGAGGCAATGTATGTATCCTAGTGACATT
37% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345093.9
ENST00000615206.4
CDS CCA 72 bp GTCGGAGCTGAGGCCGCAGCGGCCACAGTACTGCCCTaGTGCCGGGTCCCAGCCTCTCCCGGGAAGGGAAGG +
Preference number: 6 (lower is better)
Translates to: VGAEAAAATVLP*CRVPASPGKGR
Trigger: CCTTCCCTTCCCGGGAGAGGCTGGGACCCGGCACCAGGGCAGTACTGTGGCCGCTGCGGCCTCAGCTCCGAC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345093.9
ENST00000394013.6
CDS CCA 72 bp TCATCACTGAAACCCAGGTCCGCCCTGGAAGCGGCCTaGAGTCTCCGCAACCTGACCCAGTCGGAGCTGAGG +
Preference number: 6 (lower is better)
Translates to: SSLKPRSALEAA*SLRNLTQSELR
Trigger: CCTCAGCTCCGACTGGGTCAGGTTGCGGAGACTCCAGGCCGCTTCCAGGGCGGACCTGGGTTTCAGTGATGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552244.5
CDS CCA 72 bp ATGTCACAATCAGGAGTACTCGCCCTGGAAGCGGCCTaGAGTCTCCGCAACCTGACCCAGTCGGAGCTGAGG +
Preference number: 6 (lower is better)
Translates to: MSQSGVLALEAA*SLRNLTQSELR
Trigger: CCTCAGCTCCGACTGGGTCAGGTTGCGGAGACTCCAGGCCGCTTCCAGGGCGAGTACTCCTGATTGTGACAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000548225.1
CDS TCA 72 bp TCGCTTCTGCTCCGCCAGCTGGTGTTTGTGTTCAGCTaGCGTCTTCTCCAGCTCTGCGATGCGTGTCTGCTG +
Preference number: 6 (lower is better)
Translates to: SLLLRQLVFVFS*RLLQLCDACLL
Trigger: CAGCAGACACGCATCGCAGAGCTGGAGAAGACGTCAGCTGAACACAAACACCAGCTGGCGGAGCAGAAGCGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000548120.1
ENST00000549038.5
ENST00000551711.5
ENST00000552244.5
ENST00000552656.5
ENST00000615206.4
CDS CCA 72 bp GCTCATCTTTGGGCATCTCCAGGCTGCAGACCAGGGTaGGGAAAGAGCAGAACAGAGGTGATCCCTGGGACA +
Preference number: 6 (lower is better)
Translates to: AHLWASPGCRPG*GKSRTEVIPGT
Trigger: TGTCCCAGGGATCACCTCTGTTCTGCTCTTTCCCCACCCTGGTCTGCAGCCTGGAGATGCCCAAAGATGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548120.1
CDS CAA 90 bp TGCTGCTGCTGTACCACTGAGCGCAGGTGCTTAATGCAGTTATGGTaGGGCAGCTCATCTTTGGGCATCTCCAGGCTGCAGACCAGGGTG +
Preference number: 6 (lower is better)
Translates to: CCCCTTERRCLMQLW*GSSSLGISRLQTRV
Trigger: CACCCTGGTCTGCAGCCTGGAGATGCCCAAAGATGAGCTGCCCAACCATAACTGCATTAAGCACCTGCGCTCAGTGGTACAGCAGCAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548120.1
CDS TCA 72 bp TGGAAACGGGTTACATCATACCCCATGTCTCATCACTaGAACCCAGGTCCGCCCTGGAAGCGGCCTGGAGTC +
Preference number: 6 (lower is better)
Translates to: WKRVTSYPMSHH*NPGPPWKRPGV
Trigger: GACTCCAGGCCGCTTCCAGGGCGGACCTGGGTTTCAGTGATGAGACATGGGGTATGATGTAACCCGTTTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552244.5
CDS TCA 72 bp GCTAGTGAGGAGGGCAGCCAGAGACAGGGGCATAAATaGGATGGCCCTTATCCATGTGGGGCAGAAGGGAAC +
Preference number: 6 (lower is better)
Translates to: ASEEGSQRQGHK*DGPYPCGAEGN
Trigger: GTTCCCTTCTGCCCCACATGGATAAGGGCCATCTCATTTATGCCCCTGTCTCTGGCTGCCCTCCTCACTAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548225.1
CDS CAA 72 bp AGCTGGATGTCTCGCTTCTGCTCCGCCAGCTGGTGTTaGTGTTCAGCTGACGTCTTCTCCAGCTCTGCGATG +
Preference number: 6 (lower is better)
Translates to: SWMSRFCSASWC*CSADVFSSSAM
Trigger: CATCGCAGAGCTGGAGAAGACGTCAGCTGAACACAAACACCAGCTGGCGGAGCAGAAGCGAGACATCCAGCT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000548120.1
ENST00000549038.5
ENST00000551711.5
ENST00000552244.5
ENST00000552656.5
ENST00000615206.4
CDS CAA 90 bp ACTGAGCGCAGGTGCTTAATGCAGTTATGGTTGGGCAGCTCATCTTaGGGCATCTCCAGGCTGCAGACCAGGGTGGGGAAAGAGCAGAAC +
Preference number: 6 (lower is better)
Translates to: TERRCLMQLWLGSSS*GISRLQTRVGKEQN
Trigger: GTTCTGCTCTTTCCCCACCCTGGTCTGCAGCCTGGAGATGCCCAAAGATGAGCTGCCCAACCATAACTGCATTAAGCACCTGCGCTCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548120.1
CDS TCA 72 bp GAGATCATCCCTCCCCAGCGGGTCACTCTTGCTGGCTaGAGGGAGTTCACCCACTCTAGGATCTCGTTGTAT +
Preference number: 6 (lower is better)
Translates to: EIIPPQRVTLAG*REFTHSRISLY
Trigger: ATACAACGAGATCCTAGAGTGGGTGAACTCCCTTCAGCCAGCAAGAGTGACCCGCTGGGGAGGGATGATCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000548120.1
ENST00000552656.5
ENST00000615206.4
CDS CCA 72 bp ACACTGCGGATTGCACGCATGTATGCCTTTAGCAGCTaGATGTCTCGCTTCTGCTCCGCCAGCTGGTGTTTG +
Preference number: 6 (lower is better)
Translates to: TLRIARMYAFSS*MSRFCSASWCL
Trigger: CAAACACCAGCTGGCGGAGCAGAAGCGAGACATCCAGCTGCTAAAGGCATACATGCGTGCAATCCGCAGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000548120.1
ENST00000549038.5
ENST00000551711.5
ENST00000552244.5
ENST00000552656.5
ENST00000615206.4
CDS CCA 72 bp TGCTGTACCACTGAGCGCAGGTGCTTAATGCAGTTATaGTTGGGCAGCTCATCTTTGGGCATCTCCAGGCTG +
Preference number: 6 (lower is better)
Translates to: CCTTERRCLMQL*LGSSSLGISRL
Trigger: CAGCCTGGAGATGCCCAAAGATGAGCTGCCCAACCATAACTGCATTAAGCACCTGCGCTCAGTGGTACAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548120.1
CDS CAA 72 bp AGGTGCTTAATGCAGTTATGGTTGGGCAGCTCATCTTaGGGCATCTCCAGGCTGCAGACCAGGGTGGGGAAA +
Preference number: 6 (lower is better)
Translates to: RCLMQLWLGSSS*GISRLQTRVGK
Trigger: TTTCCCCACCCTGGTCTGCAGCCTGGAGATGCCCAAAGATGAGCTGCCCAACCATAACTGCATTAAGCACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548120.1
CDS CAA 72 bp TGTACCACTGAGCGCAGGTGCTTAATGCAGTTATGGTaGGGCAGCTCATCTTTGGGCATCTCCAGGCTGCAG +
Preference number: 6 (lower is better)
Translates to: CTTERRCLMQLW*GSSSLGISRLQ
Trigger: CTGCAGCCTGGAGATGCCCAAAGATGAGCTGCCCAACCATAACTGCATTAAGCACCTGCGCTCAGTGGTACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548120.1
CDS CAA 72 bp GGTGCTTGCCTGGTAATCGTGAGCTTCTCCTCATACTaGCCCCAGGATGATACAACTGACTCTGGTCTGGCA +
Preference number: 6 (lower is better)
Translates to: GACLVIVSFSSY*PQDDTTDSGLA
Trigger: TGCCAGACCAGAGTCAGTTGTATCATCCTGGGGCAAGTATGAGGAGAAGCTCACGATTACCAGGCAAGCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548225.1
CDS CAA 90 bp ATGTTCACAATGAGGTGCCTGGTAATCGTGAGCTTCTCCTCATACTaGCCCCAGGATGATACAACTGACTCTGGTCTGGCAAGGCTGGCA +
Preference number: 6 (lower is better)
Translates to: MFTMRCLVIVSFSSY*PQDDTTDSGLARLA
Trigger: TGCCAGCCTTGCCAGACCAGAGTCAGTTGTATCATCCTGGGGCAAGTATGAGGAGAAGCTCACGATTACCAGGCACCTCATTGTGAACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394013.6
ENST00000547967.5
ENST00000549119.1
ENST00000550379.1
CDS TCA 72 bp TCTCCCAGTAACCCATCTTGTTGGCTATTCTCCGACTaGGTATTCCTTCCCAGTGACAAGCTCCATCGCCCA +
Preference number: 6 (lower is better)
Translates to: SPSNPSCWLFSD*VFLPSDKLHRP
Trigger: TGGGCGATGGAGCTTGTCACTGGGAAGGAATACTCAGTCGGAGAATAGCCAACAAGATGGGTTACTGGGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000548225.1
ENST00000549038.5
ENST00000549119.1
ENST00000552656.5
ENST00000615206.4
CDS CAA 72 bp ATGAGGTGCCTGGTAATCGTGAGCTTCTCCTCATACTaGCCCCAGGATGATACAACTGACTCTGGTCTGGCA +
Preference number: 6 (lower is better)
Translates to: MRCLVIVSFSSY*PQDDTTDSGLA
Trigger: TGCCAGACCAGAGTCAGTTGTATCATCCTGGGGCAAGTATGAGGAGAAGCTCACGATTACCAGGCACCTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394013.6
ENST00000547967.5
ENST00000549119.1
ENST00000550379.1
CDS TCA 72 bp AGGATCTCGTTGTATTCAATTGTCTCCTCCAGGTTCTaGAGGTTGGGGTTGACACTGCGGATTGCACGCATG +
Preference number: 6 (lower is better)
Translates to: RISLYSIVSSRF*RLGLTLRIARM
Trigger: CATGCGTGCAATCCGCAGTGTCAACCCCAACCTTCAGAACCTGGAGGAGACAATTGAATACAACGAGATCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000548120.1
ENST00000551711.5
ENST00000552244.5
ENST00000552656.5
ENST00000615206.4
CDS GCA 72 bp TTAGAGCAGGAAGCCAAGGAGGCTAAGAATACTCCTTaGCAACATGCCAAAGAGACCTCCTCAGCTAGTGAG +
Preference number: 6 (lower is better)
Translates to: LEQEAKEAKNTP*QHAKETSSASE
Trigger: CTCACTAGCTGAGGAGGTCTCTTTGGCATGTTGGCAAGGAGTATTCTTAGCCTCCTTGGCTTCCTGCTCTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548225.1
CDS CCA 72 bp GAAGGTGGCAGCTTTCACATCAAAATGCAGAGTGCATaGCTGTATCAAAAGCTGGTCTGTACTGGCTCCTCC +
Preference number: 6 (lower is better)
Translates to: EGGSFHIKMQSA*LYQKLVCTGSS
Trigger: GGAGGAGCCAGTACAGACCAGCTTTTGATACAGCCATGCACTCTGCATTTTGATGTGAAAGCTGCCACCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394013.6
ENST00000547967.5
ENST00000550379.1
CDS TCA 72 bp ATTCAATTGTCTCCTCCAGGTTCTGAAGGTTGGGGTTaGCACTGCGGATTGCACGCATGTATGCCTTTAGCA +
Preference number: 6 (lower is better)
Translates to: IQLSPPGSEGWG*HCGLHACMPLA
Trigger: TGCTAAAGGCATACATGCGTGCAATCCGCAGTGTCAACCCCAACCTTCAGAACCTGGAGGAGACAATTGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000548120.1
ENST00000551711.5
ENST00000552244.5
ENST00000552656.5
ENST00000615206.4
CDS CCA 72 bp CAAATAGGGCAGATAAGATCTTCGTCAACATCCCCCTaGAAACGGGTTACATCATACCCCATGTCTCATCAC +
Preference number: 6 (lower is better)
Translates to: QIGQIRSSSTSP*KRVTSYPMSHH
Trigger: GTGATGAGACATGGGGTATGATGTAACCCGTTTCCAGGGGGATGTTGACGAAGATCTTATCTGCCCTATTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000345093.9
ENST00000394013.6
ENST00000547967.5
ENST00000548225.1
ENST00000549038.5
ENST00000549119.1
ENST00000552244.5
ENST00000552656.5
ENST00000615206.4
CDS CCA 72 bp TCACTTTCCTGGACTTGCACTCTGCCTCCTCTTCTCTaGGTTGTAAGCTACTCTAGGATCTCGTTGTATTCA +
Preference number: 6 (lower is better)
Translates to: SLSWTCTLPPLL*VVSYSRISLYS
Trigger: TGAATACAACGAGATCCTAGAGTAGCTTACAACCCAGAGAAGAGGAGGCAGAGTGCAAGTCCAGGAAAGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547967.5
CDS GCA 72 bp AATGACCTATTGAAGGTGGCAGCTTTCACATCAAAATaGAGAGTGCATGGCTGTATCAAAAGCTGGTCTGTA +
Preference number: 6 (lower is better)
Translates to: NDLLKVAAFTSK*RVHGCIKSWSV
Trigger: TACAGACCAGCTTTTGATACAGCCATGCACTCTGCATTTTGATGTGAAAGCTGCCACCTTCAATAGGTCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394013.6
ENST00000547967.5
ENST00000550379.1