RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RNF40 (Homo sapiens)

Ensembl gene IDs: ENSG00000103549

Ensembl transcript IDs: ENST00000324685.11, ENST00000357890.9, ENST00000493683.5, ENST00000563683.5, ENST00000563909.5, ENST00000564260.1, ENST00000565931.1, ENST00000565995.5, ENST00000566703.1, ENST00000566811.5, ENST00000567365.2, ENST00000602784.1

Found 918 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CCACCAGCGTGCCCGCCGCCGCCGGCCCTACGCCCGAGGTCACCGTaGCGGCCCGCGTCTCCTTCTCCAGTTCGTCCTGGTCCAGCAGCG +
Preference number: 1 (lower is better)
Translates to: PPACPPPPALRPRSP*RPASPSPVRPGPAA
Trigger: CGCTGCTGGACCAGGACGAACTGGAGAAGGAGACGCGGGCCGCCACGGTGACCTCGGGCGTAGGGCCGGCGGCGGCGGGCACGCTGGTGG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324685.11
3UTR TCA 90 bp GACGCACGCGGCCCCTGCCGTGGCCATAGCACTGTCGCCAGCGCCTaGACCAACACCGCTCCGCACCGGCTCTGGCGCCAGCCCCAGTCC +
Preference number: 1 (lower is better)
Translates to: DARGPCRGHSTVASA*TNTAPHRLWRQPQS
Trigger: GGACTGGGGCTGGCGCCAGAGCCGGTGCGGAGCGGTGTTGGTTCAGGCGCTGGCGACAGTGCTATGGCCACGGCAGGGGCCGCGTGCGTC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324685.11
3UTR TCA 90 bp GCGAAGGCTACTCCTGGAAGGGGACCGCGCTTACGGAGGCCTGGCTaGCCTCCACCCGTGACCGGTGCGGCGCTCCTGAGACTGGCGCTC +
Preference number: 1 (lower is better)
Translates to: AKATPGRGPRLRRPG*PPPVTGAALLRLAL
Trigger: GAGCGCCAGTCTCAGGAGCGCCGCACCGGTCACGGGTGGAGGTCAGCCAGGCCTCCGTAAGCGCGGTCCCCTTCCAGGAGTAGCCTTCGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324685.11
3UTR CCA 90 bp CCAGGCGAAGGCTACTCCTGGAAGGGGACCGCGCTTACGGAGGCCTaGCTGACCTCCACCCGTGACCGGTGCGGCGCTCCTGAGACTGGC +
Preference number: 1 (lower is better)
Translates to: PGEGYSWKGTALTEA*LTSTRDRCGAPETG
Trigger: GCCAGTCTCAGGAGCGCCGCACCGGTCACGGGTGGAGGTCAGCCAGGCCTCCGTAAGCGCGGTCCCCTTCCAGGAGTAGCCTTCGCCTGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324685.11
3UTR TCA 90 bp CACTTCCCAGGATGCAGCCCGAGGAGTCCCGGCATCCCCCGGCCATaGCAGCCAAGGACGTGGTCAGACCGGGGTCGGTGGGAGCAGGAC +
Preference number: 1 (lower is better)
Translates to: HFPGCSPRSPGIPRP*QPRTWSDRGRWEQD
Trigger: GTCCTGCTCCCACCGACCCCGGTCTGACCACGTCCTTGGCTGTCATGGCCGGGGGATGCCGGGACTCCTCGGGCTGCATCCTGGGAAGTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324685.11
3UTR GCA 90 bp GCGACGACCACCACGCTCTCCCCTTCAGGCCCAGTCCGGGATCCCTaGCGGCCGTTAAGTCTGAGCCCTCCCAGGCTCACACCAAGCCAG +
Preference number: 1 (lower is better)
Translates to: ATTTTLSPSGPVRDP*RPLSLSPPRLTPSQ
Trigger: CTGGCTTGGTGTGAGCCTGGGAGGGCTCAGACTTAACGGCCGGCAGGGATCCCGGACTGGGCCTGAAGGGGAGAGCGTGGTGGTCGTCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324685.11
3UTR CCA 90 bp AACAGAGGCTGTGGGTCCAAACGGGTCCCTGCAGCTCCAACCCTCTaGCCTCTCCGGGCACTGCCCTCACAGCCGATGGAGCATGGCTGG +
Preference number: 1 (lower is better)
Translates to: NRGCGSKRVPAAPTL*PLRALPSQPMEHGW
Trigger: CCAGCCATGCTCCATCGGCTGTGAGGGCAGTGCCCGGAGAGGCCAGAGGGTTGGAGCTGCAGGGACCCGTTTGGACCCACAGCCTCTGTT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
ENST00000602784.1
3UTR TCA 90 bp CCGCACCGCTCCCGAGGCCGATTGCAACGAGGGAAGTCACCCAGCTaGGGTGTCCCGATCTGTGCATTCGAGTGGTGTGGGGGTGAAGCC +
Preference number: 1 (lower is better)
Translates to: PHRSRGRLQRGKSPS*GVPICAFEWCGGEA
Trigger: GGCTTCACCCCCACACCACTCGAATGCACAGATCGGGACACCTCAGCTGGGTGACTTCCCTCGTTGCAATCGGCCTCGGGAGCGGTGCGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324685.11
3UTR CCA 90 bp GACCGGTGCGGCGCTCCTGAGACTGGCGCTCTCCAGGGGCGAAGGTaGCCGCGTCTCTATGATGCAATATCCTGCGTTTTTCCCACCCTC +
Preference number: 1 (lower is better)
Translates to: DRCGAPETGALQGRR*PRLYDAISCVFPTL
Trigger: GAGGGTGGGAAAAACGCAGGATATTGCATCATAGAGACGCGGCCACCTTCGCCCCTGGAGAGCGCCAGTCTCAGGAGCGCCGCACCGGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324685.11
3UTR GCA 90 bp ATACAAGCATCTCTAGAACAGAGGCTGTGGGTCCAAACGGGTCCCTaGAGCTCCAACCCTCTGGCCTCTCCGGGCACTGCCCTCACAGCC +
Preference number: 1 (lower is better)
Translates to: IQASLEQRLWVQTGP*SSNPLASPGTALTA
Trigger: GGCTGTGAGGGCAGTGCCCGGAGAGGCCAGAGGGTTGGAGCTGCAGGGACCCGTTTGGACCCACAGCCTCTGTTCTAGAGATGCTTGTAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
ENST00000602784.1
3UTR CCA 90 bp GGGGAAGCTCTTCTAGCTGGAATGATTGGAAGTTGGCCCAGCGGCTaGGGCTGGTCTGTCCCTTCCCCTCCTGGGAAGTTCCACCTCCAC +
Preference number: 1 (lower is better)
Translates to: GEALLAGMIGSWPSG*GWSVPSPPGKFHLH
Trigger: GTGGAGGTGGAACTTCCCAGGAGGGGAAGGGACAGACCAGCCCCAGCCGCTGGGCCAACTTCCAATCATTCCAGCTAGAAGAGCTTCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
ENST00000602784.1
3UTR CCA 90 bp GGAATTACTTGGCATCTACTCAAGAGCCCAGGCGAAGGCTACTCCTaGAAGGGGACCGCGCTTACGGAGGCCTGGCTGACCTCCACCCGT +
Preference number: 1 (lower is better)
Translates to: GITWHLLKSPGEGYS*KGTALTEAWLTSTR
Trigger: ACGGGTGGAGGTCAGCCAGGCCTCCGTAAGCGCGGTCCCCTTCCAGGAGTAGCCTTCGCCTGGGCTCTTGAGTAGATGCCAAGTAATTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324685.11
3UTR CCA 90 bp CAAAGTGCTGCTCAGCTGCTGCAGCTAAAATCGGGGGACTACATTTaGGGTGCGCGGCCTGGCTACTCTGGCTGCAGGCCGAGGGTTGAA +
Preference number: 1 (lower is better)
Translates to: QSAAQLLQLKSGDYI*GARPGYSGCRPRVE
Trigger: TTCAACCCTCGGCCTGCAGCCAGAGTAGCCAGGCCGCGCACCCCAAATGTAGTCCCCCGATTTTAGCTGCAGCAGCTGAGCAGCACTTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324685.11
3UTR GCA 90 bp CGCAACCGGGAAACTAGCTCTCTCTCCGAGAACCTCCTAACCATGTaGGGACCAGGAACTACACTTCCCAGGATGCAGCCCGAGGAGTCC +
Preference number: 1 (lower is better)
Translates to: RNRETSSLSENLLTM*GPGTTLPRMQPEES
Trigger: GGACTCCTCGGGCTGCATCCTGGGAAGTGTAGTTCCTGGTCCGCACATGGTTAGGAGGTTCTCGGAGAGAGAGCTAGTTTCCCGGTTGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324685.11
3UTR CCA 90 bp GCAAGTGATGCCCCCATCTGCCAAGAGGGTACCTCCTTCAGCCCTTaGCACAAGAGCCAGACCAAGGTGTCCAGGGAACTCCACAGGACA +
Preference number: 1 (lower is better)
Translates to: ASDAPICQEGTSFSP*HKSQTKVSRELHRT
Trigger: TGTCCTGTGGAGTTCCCTGGACACCTTGGTCTGGCTCTTGTGCCAAGGGCTGAAGGAGGTACCCTCTTGGCAGATGGGGGCATCACTTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
ENST00000602784.1
3UTR CCA 90 bp GCTCTTCTAGCTGGAATGATTGGAAGTTGGCCCAGCGGCTGGGGCTaGTCTGTCCCTTCCCCTCCTGGGAAGTTCCACCTCCACTGTAGT +
Preference number: 1 (lower is better)
Translates to: ALLAGMIGSWPSGWG*SVPSPPGKFHLHCS
Trigger: ACTACAGTGGAGGTGGAACTTCCCAGGAGGGGAAGGGACAGACCAGCCCCAGCCGCTGGGCCAACTTCCAATCATTCCAGCTAGAAGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
ENST00000602784.1
3UTR GCA 90 bp GCCGTTAAGTCTGAGCCCTCCCAGGCTCACACCAAGCCAGCAAAGTaGTGCTCAGCTGCTGCAGCTAAAATCGGGGGACTACATTTGGGG +
Preference number: 1 (lower is better)
Translates to: AVKSEPSQAHTKPAK*CSAAAAKIGGLHLG
Trigger: CCCCAAATGTAGTCCCCCGATTTTAGCTGCAGCAGCTGAGCAGCACTTTGCTGGCTTGGTGTGAGCCTGGGAGGGCTCAGACTTAACGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324685.11
3UTR CCA 90 bp ACAGACAGGTTAGGGCCAGTTTCCGGGAAGCTCAGTCAAGTGCTCTaGGCTCCTCAGGCCTCTCAGGCAGACCTTTTCTGTAGGGCAGTG +
Preference number: 1 (lower is better)
Translates to: TDRLGPVSGKLSQVL*APQASQADLFCRAV
Trigger: CACTGCCCTACAGAAAAGGTCTGCCTGAGAGGCCTGAGGAGCCCAGAGCACTTGACTGAGCTTCCCGGAAACTGGCCCTAACCTGTCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
ENST00000602784.1
3UTR TCA 90 bp AGGAAGGTGACTGCAGCAACCTTAGAGCTTCCCAAAGGAAGCAAGTaGTGCCCCCATCTGCCAAGAGGGTACCTCCTTCAGCCCTTGGCA +
Preference number: 1 (lower is better)
Translates to: RKVTAATLELPKGSK*CPHLPRGYLLQPLA
Trigger: TGCCAAGGGCTGAAGGAGGTACCCTCTTGGCAGATGGGGGCATCACTTGCTTCCTTTGGGAAGCTCTAAGGTTGCTGCAGTCACCTTCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
ENST00000602784.1
3UTR GCA 90 bp GCTCTGACCTTTAGGAAAAGATGGAACGAAGCTTGGCTGATCCCATaGCCACTAGCATGCACCAGGGTCCCCAAACCAACTAGATGGGCA +
Preference number: 1 (lower is better)
Translates to: ALTFRKRWNEAWLIP*PLACTRVPKPTRWA
Trigger: TGCCCATCTAGTTGGTTTGGGGACCCTGGTGCATGCTAGTGGGCATGGGATCAGCCAAGCTTCGTTCCATCTTTTCCTAAAGGTCAGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
3UTR GCA 90 bp AAATCGGGGGACTACATTTGGGGTGCGCGGCCTGGCTACTCTGGCTaGAGGCCGAGGGTTGAACGTTTATTCATCACAATTAACAGCCTA +
Preference number: 1 (lower is better)
Translates to: KSGDYIWGARPGYSG*RPRVERLFITINSL
Trigger: TAGGCTGTTAATTGTGATGAATAAACGTTCAACCCTCGGCCTGCAGCCAGAGTAGCCAGGCCGCGCACCCCAAATGTAGTCCCCCGATTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324685.11
3UTR CCA 90 bp GAAGACCCACGAGGAGAGTTTTGCCCCTCTGATAAGGAGACCGGGTaGCCTTTAGCGCAGATATCTAGAGAGACGATGCGGAATTACTTG +
Preference number: 1 (lower is better)
Translates to: EDPRGEFCPSDKETG*PLAQISRETMRNYL
Trigger: CAAGTAATTCCGCATCGTCTCTCTAGATATCTGCGCTAAAGGCCACCCGGTCTCCTTATCAGAGGGGCAAAACTCTCCTCGTGGGTCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324685.11
3UTR GCA 90 bp AAACTGATGATGTTGGTTCAGCACCTGCAAGATGAGGAAGGTGACTaGAGCAACCTTAGAGCTTCCCAAAGGAAGCAAGTGATGCCCCCA +
Preference number: 1 (lower is better)
Translates to: KLMMLVQHLQDEEGD*SNLRASQRKQVMPP
Trigger: TGGGGGCATCACTTGCTTCCTTTGGGAAGCTCTAAGGTTGCTGCAGTCACCTTCCTCATCTTGCAGGTGCTGAACCAACATCATCAGTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
ENST00000602784.1
3UTR GCA 90 bp TTGATGCCGACTTTTATTAGGTATGAAGACCCACGAGGAGAGTTTTaGCCCTCTGATAAGGAGACCGGGTGGCCTTTAGCGCAGATATCT +
Preference number: 1 (lower is better)
Translates to: LMPTFIRYEDPRGEF*PSDKETGWPLAQIS
Trigger: AGATATCTGCGCTAAAGGCCACCCGGTCTCCTTATCAGAGGGGCAAAACTCTCCTCGTGGGTCTTCATACCTAATAAAAGTCGGCATCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324685.11
3UTR-3UTR CCA 90 bp AGGATGCAGCCCGAGGAGTCCCGGCATCCCCCGGCCATGACAGCCAAGGACGTGCCCAGCGGCTGGGGCTaGTCTGTCCCTTCCCCTCCT +
Preference number: 2 (lower is better)
Translates to: RMQPEESRHPPAMTAKDVPSGWG*SVPSPP
Trigger: AGGAGGGGAAGGGACAGACCAGCCCCAGCCGCTGGG...CACGTCCTTGGCTGTCATGGCCGGGGGATGCCGGGACTCCTCGGGCTGCATCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000324685.11
3UTR-3UTR CCA 90 bp CCGCTCGGTACACGCCGCACCGCTCCCGAGGCCGATTGCAACGAGGGAAGTCACTTGGGGTGCGCGGCCTaGCTACTCTGGCTGCAGGCC +
Preference number: 2 (lower is better)
Translates to: PLGTRRTAPEADCNEGSHLGCAA*LLWLQA
Trigger: GGCCTGCAGCCAGAGTAGCCAGGCCGCGCACCCCAA...GTGACTTCCCTCGTTGCAATCGGCCTCGGGAGCGGTGCGGCGTGTACCGAGCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324685.11
3UTR-3UTR TCA 90 bp CTGAGAAGCGGTCCGCAGGATCCAGTTCAGGCCGGCCTTTGGCCAGCGCAACCGGGCATCCCCCGGCCATaGCAGCCAAGGACGTGGTCA +
Preference number: 2 (lower is better)
Translates to: LRSGPQDPVQAGLWPAQPGIPRP*QPRTWS
Trigger: TGACCACGTCCTTGGCTGTCATGGCCGGGGGATGCC...CGGTTGCGCTGGCCAAAGGCCGGCCTGAACTGGATCCTGCGGACCGCTTCTCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324685.11
3UTR-3UTR CCA 90 bp GCCCGAGGAGTCCCGGCATCCCCCGGCCATGACAGCCAAGGACGTGGTCAGACCACAGCCGATGGAGCATaGCTGGGCAGGCAGACAGGA +
Preference number: 2 (lower is better)
Translates to: ARGVPASPGHDSQGRGQTTADGA*LGRQTG
Trigger: TCCTGTCTGCCTGCCCAGCCATGCTCCATCGGCTGT...GGTCTGACCACGTCCTTGGCTGTCATGGCCGGGGGATGCCGGGACTCCTCGGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324685.11
3UTR-3UTR TCA 90 bp CCGCACCGGCTCTGGCGCCAGCCCCAGTCCTGCCTCGGTGAAGGATCCGCCCGGCCTAGGCTGCAGCTCTaGCCTTTAGGAAAAGATGGA +
Preference number: 2 (lower is better)
Translates to: PHRLWRQPQSCLGEGSARPRLQL*PLGKDG
Trigger: TCCATCTTTTCCTAAAGGTCAGAGCTGCAGCCTAGG...CCGGGCGGATCCTTCACCGAGGCAGGACTGGGGCTGGCGCCAGAGCCGGTGCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324685.11
3UTR-3UTR GCA 90 bp CTGAGAAGCGGTCCGCAGGATCCAGTTCAGGCCGGCCTTTGGCCAGCGCAACCGCTACACTTCCCAGGATaGAGCCCGAGGAGTCCCGGC +
Preference number: 2 (lower is better)
Translates to: LRSGPQDPVQAGLWPAQPLHFPG*SPRSPG
Trigger: GCCGGGACTCCTCGGGCTGCATCCTGGGAAGTGTAG...CGGTTGCGCTGGCCAAAGGCCGGCCTGAACTGGATCCTGCGGACCGCTTCTCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324685.11
3UTR-3UTR CCA 90 bp CTGCAGCTCCAACCCTCTGGCCTCTCCGGGCACTGCCCTCACAGCCGATGGAGCCCCAAACCAACTAGATaGGCAGGGGCTGGGCCCATG +
Preference number: 2 (lower is better)
Translates to: LQLQPSGLSGHCPHSRWSPKPTR*AGAGPM
Trigger: CATGGGCCCAGCCCCTGCCCATCTAGTTGGTTTGGG...GCTCCATCGGCTGTGAGGGCAGTGCCCGGAGAGGCCAGAGGGTTGGAGCTGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
3UTR-3UTR CCA 90 bp CTCCGGGCACTGCCCTCACAGCCGATGGAGCATGGCTGGGCAGGCAGACAGGACCCCAAACCAACTAGATaGGCAGGGGCTGGGCCCATG +
Preference number: 2 (lower is better)
Translates to: LRALPSQPMEHGWAGRQDPKPTR*AGAGPM
Trigger: CATGGGCCCAGCCCCTGCCCATCTAGTTGGTTTGGG...GTCCTGTCTGCCTGCCCAGCCATGCTCCATCGGCTGTGAGGGCAGTGCCCGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
3UTR-3UTR TCA 90 bp CTCCGGGCACTGCCCTCACAGCCGATGGAGCATGGCTGGGCAGGCAGACAGGACACTGGTCCTCATTTGTaGGCCAGTAGGCAGGGAGCG +
Preference number: 2 (lower is better)
Translates to: LRALPSQPMEHGWAGRQDTGPHL*ASRQGA
Trigger: CGCTCCCTGCCTACTGGCTCACAAATGAGGACCAGT...GTCCTGTCTGCCTGCCCAGCCATGCTCCATCGGCTGTGAGGGCAGTGCCCGGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
ENST00000602784.1
3UTR-3UTR TCA 90 bp CTGCAGCTCCAACCCTCTGGCCTCTCCGGGCACTGCCCTCACAGCCGATGGAGCGAGCCTTGGGATGCATaGGGTGGGGGTAAATGGGCT +
Preference number: 2 (lower is better)
Translates to: LQLQPSGLSGHCPHSRWSEPWDA*GGGKWA
Trigger: AGCCCATTTACCCCCACCTCATGCATCCCAAGGCTC...GCTCCATCGGCTGTGAGGGCAGTGCCCGGAGAGGCCAGAGGGTTGGAGCTGCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
ENST00000602784.1
3UTR-3UTR TCA 90 bp TTACTTGGCATCTACTCAAGAGCCCAGGCGAAGGCTACTCCTGGAAGGGGACCGCCAGTCCTGCCTCGGTaGAGGATCCGCCCGGGGCGC +
Preference number: 2 (lower is better)
Translates to: LLGIYSRAQAKATPGRGPPVLPR*RIRPGR
Trigger: GCGCCCCGGGCGGATCCTTCACCGAGGCAGGACTGG...CGGTCCCCTTCCAGGAGTAGCCTTCGCCTGGGCTCTTGAGTAGATGCCAAGTAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324685.11
3UTR-3UTR CCA 90 bp CTCCGGGCACTGCCCTCACAGCCGATGGAGCATGGCTGGGCAGGCAGACAGGACGAAGGAAAGTCTTCCTaGGGCCTGCAGCCCAGTCTC +
Preference number: 2 (lower is better)
Translates to: LRALPSQPMEHGWAGRQDEGKSS*GLQPSL
Trigger: GAGACTGGGCTGCAGGCCCCAGGAAGACTTTCCTTC...GTCCTGTCTGCCTGCCCAGCCATGCTCCATCGGCTGTGAGGGCAGTGCCCGGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
ENST00000602784.1
3UTR CAA 90 bp GAAGCCGCTGAGAAGCGGTCCGCAGGATCCAGTTCAGGCCGGCCTTaGGCCAGCGCAACCGGGAAACTAGCTCTCTCTCCGAGAACCTCC +
Preference number: 2 (lower is better)
Translates to: EAAEKRSAGSSSGRP*ASATGKLALSPRTS
Trigger: GGAGGTTCTCGGAGAGAGAGCTAGTTTCCCGGTTGCGCTGGCCAAAGGCCGGCCTGAACTGGATCCTGCGGACCGCTTCTCAGCGGCTTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324685.11
3UTR-3UTR GCA 90 bp CTCCGGGCACTGCCCTCACAGCCGATGGAGCATGGCTGGGCAGGCAGACAGGACAGTCTTCCTGGGGCCTaGAGCCCAGTCTCAAACAAG +
Preference number: 2 (lower is better)
Translates to: LRALPSQPMEHGWAGRQDSLPGA*SPVSNK
Trigger: CTTGTTTGAGACTGGGCTGCAGGCCCCAGGAAGACT...GTCCTGTCTGCCTGCCCAGCCATGCTCCATCGGCTGTGAGGGCAGTGCCCGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
ENST00000602784.1
3UTR-3UTR GCA 90 bp CTCCGGGCACTGCCCTCACAGCCGATGGAGCATGGCTGGGCAGGCAGACAGGACAGTGATGCCCCCATCTaGCAAGAGGGTACCTCCTTC +
Preference number: 2 (lower is better)
Translates to: LRALPSQPMEHGWAGRQDSDAPI*QEGTSF
Trigger: GAAGGAGGTACCCTCTTGGCAGATGGGGGCATCACT...GTCCTGTCTGCCTGCCCAGCCATGCTCCATCGGCTGTGAGGGCAGTGCCCGGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
ENST00000602784.1
3UTR-3UTR GCA 90 bp ACGCACGCGGCCCCTGCCGTGGCCATAGCACTGTCGCCAGCGCCTGAACCAACAACCAAGCCAGCAAAGTaGTGCTCAGCTGCTGCAGCT +
Preference number: 2 (lower is better)
Translates to: THAAPAVAIALSPAPEPTTKPAK*CSAAAA
Trigger: AGCTGCAGCAGCTGAGCAGCACTTTGCTGGCTTGGT...TGTTGGTTCAGGCGCTGGCGACAGTGCTATGGCCACGGCAGGGGCCGCGTGCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324685.11
3UTR-3UTR TCA 90 bp CGGACCAGGAACTACACTTCCCAGGATGCAGCCCGAGGAGTCCCGGCATCCCCCCCCAAAGGAAGCAAGTaGTGCCCCCATCTGCCAAGA +
Preference number: 2 (lower is better)
Translates to: RTRNYTSQDAARGVPASPPKGSK*CPHLPR
Trigger: TCTTGGCAGATGGGGGCATCACTTGCTTCCTTTGGG...GGGGGATGCCGGGACTCCTCGGGCTGCATCCTGGGAAGTGTAGTTCCTGGTCCG
62% GC, longest homopolymer 8 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000324685.11
3UTR-3UTR GCA 90 bp CTGAGAAGCGGTCCGCAGGATCCAGTTCAGGCCGGCCTTTGGCCAGCGCAACCGAGTCTTCCTGGGGCCTaGAGCCCAGTCTCAAACAAG +
Preference number: 2 (lower is better)
Translates to: LRSGPQDPVQAGLWPAQPSLPGA*SPVSNK
Trigger: CTTGTTTGAGACTGGGCTGCAGGCCCCAGGAAGACT...CGGTTGCGCTGGCCAAAGGCCGGCCTGAACTGGATCCTGCGGACCGCTTCTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324685.11
3UTR-3UTR GCA 90 bp CGGACCAGGAACTACACTTCCCAGGATGCAGCCCGAGGAGTCCCGGCATCCCCCAGTGATGCCCCCATCTaGCAAGAGGGTACCTCCTTC +
Preference number: 2 (lower is better)
Translates to: RTRNYTSQDAARGVPASPSDAPI*QEGTSF
Trigger: GAAGGAGGTACCCTCTTGGCAGATGGGGGCATCACT...GGGGGATGCCGGGACTCCTCGGGCTGCATCCTGGGAAGTGTAGTTCCTGGTCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000324685.11
3UTR-3UTR CCA 90 bp AGTTCAGGCCGGCCTTTGGCCAGCGCAACCGGGAAACTAGCTCTCTCTCCGAGACCACTAGACCTGGGGTaGGGAGGAGATGGGGGCACA +
Preference number: 2 (lower is better)
Translates to: SSGRPLASATGKLALSPRPLDLG*GGDGGT
Trigger: TGTGCCCCCATCTCCTCCCCACCCCAGGTCTAGTGG...TCTCGGAGAGAGAGCTAGTTTCCCGGTTGCGCTGGCCAAAGGCCGGCCTGAACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324685.11
3UTR-3UTR CCA 90 bp CTGAGAAGCGGTCCGCAGGATCCAGTTCAGGCCGGCCTTTGGCCAGCGCAACCGACCTCCTTCAGCCCTTaGCACAAGAGCCAGACCAAG +
Preference number: 2 (lower is better)
Translates to: LRSGPQDPVQAGLWPAQPTSFSP*HKSQTK
Trigger: CTTGGTCTGGCTCTTGTGCCAAGGGCTGAAGGAGGT...CGGTTGCGCTGGCCAAAGGCCGGCCTGAACTGGATCCTGCGGACCGCTTCTCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324685.11
3UTR-3UTR CCA 90 bp AGCTCCAACCCTCTGGCCTCTCCGGGCACTGCCCTCACAGCCGATGGAGCATGGACCTCCTTCAGCCCTTaGCACAAGAGCCAGACCAAG +
Preference number: 2 (lower is better)
Translates to: SSNPLASPGTALTADGAWTSFSP*HKSQTK
Trigger: CTTGGTCTGGCTCTTGTGCCAAGGGCTGAAGGAGGT...CCATGCTCCATCGGCTGTGAGGGCAGTGCCCGGAGAGGCCAGAGGGTTGGAGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
ENST00000602784.1
3UTR-3UTR CCA 90 bp GGGTACCTCCTTCAGCCCTTGGCACAAGAGCCAGACCAAGGTGTCCAGGGAACTCCATGGGGTCCGGAATaGAGGGTGGGGCCACTAGAC +
Preference number: 2 (lower is better)
Translates to: GYLLQPLAQEPDQGVQGTPWGPE*RVGPLD
Trigger: GTCTAGTGGCCCCACCCTCCATTCCGGACCCCATGG...AGTTCCCTGGACACCTTGGTCTGGCTCTTGTGCCAAGGGCTGAAGGAGGTACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
3UTR-3UTR CCA 90 bp TCCACTGTAGTTAAGGCCACCAGGATGAAAGCAGGGTTAGGTCCAGGGACCCAGCAGGGGCTGGGCCCATaGGGTCCGGAATGGAGGGTG +
Preference number: 2 (lower is better)
Translates to: STVVKATRMKAGLGPGTQQGLGP*GPEWRV
Trigger: CACCCTCCATTCCGGACCCCATGGGCCCAGCCCCTG...CTGGGTCCCTGGACCTAACCCTGCTTTCATCCTGGTGGCCTTAACTACAGTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
3UTR-3UTR CCA 90 bp AGCTCCAACCCTCTGGCCTCTCCGGGCACTGCCCTCACAGCCGATGGAGCATGGCCGAGGTTAGGGGGATaGTGGGTGAAGGAAAGTCTT +
Preference number: 2 (lower is better)
Translates to: SSNPLASPGTALTADGAWPRLGG*WVKESL
Trigger: AAGACTTTCCTTCACCCACCATCCCCCTAACCTCGG...CCATGCTCCATCGGCTGTGAGGGCAGTGCCCGGAGAGGCCAGAGGGTTGGAGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
ENST00000602784.1
3UTR-3UTR TCA 90 bp AGCTCCAACCCTCTGGCCTCTCCGGGCACTGCCCTCACAGCCGATGGAGCATGGCCTAGGCTGCAGCTCTaGCCTTTAGGAAAAGATGGA +
Preference number: 2 (lower is better)
Translates to: SSNPLASPGTALTADGAWPRLQL*PLGKDG
Trigger: TCCATCTTTTCCTAAAGGTCAGAGCTGCAGCCTAGG...CCATGCTCCATCGGCTGTGAGGGCAGTGCCCGGAGAGGCCAGAGGGTTGGAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
3UTR-3UTR TCA 90 bp ACGCACGCGGCCCCTGCCGTGGCCATAGCACTGTCGCCAGCGCCTGAACCAACACTGCAGGCCGAGGGTTaGACGTTTATTCATCACAAT +
Preference number: 2 (lower is better)
Translates to: THAAPAVAIALSPAPEPTLQAEG*TFIHHN
Trigger: ATTGTGATGAATAAACGTTCAACCCTCGGCCTGCAG...TGTTGGTTCAGGCGCTGGCGACAGTGCTATGGCCACGGCAGGGGCCGCGTGCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324685.11
3UTR-3UTR GCA 90 bp CTGCAGCTCCAACCCTCTGGCCTCTCCGGGCACTGCCCTCACAGCCGATGGAGCTGTTGGTTCAGCACCTaGAAGATGAGGAAGGTGACT +
Preference number: 2 (lower is better)
Translates to: LQLQPSGLSGHCPHSRWSCWFST*KMRKVT
Trigger: AGTCACCTTCCTCATCTTGCAGGTGCTGAACCAACA...GCTCCATCGGCTGTGAGGGCAGTGCCCGGAGAGGCCAGAGGGTTGGAGCTGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
ENST00000602784.1
3UTR-3UTR CCA 90 bp TGGTTCAGCACCTGCAAGATGAGGAAGGTGACTGCAGCAACCTTAGAGCTTCCCCAGGGGCTGGGCCCATaGGGTCCGGAATGGAGGGTG +
Preference number: 2 (lower is better)
Translates to: WFSTCKMRKVTAATLELPQGLGP*GPEWRV
Trigger: CACCCTCCATTCCGGACCCCATGGGCCCAGCCCCTG...GGGAAGCTCTAAGGTTGCTGCAGTCACCTTCCTCATCTTGCAGGTGCTGAACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
3UTR-3UTR CCA 90 bp GTGCGCGGCCTGGCTACTCTGGCTGCAGGCCGAGGGTTGAACGTTTATTCATCACCCAAACCAACTAGATaGGCAGGGGCTGGGCCCATG +
Preference number: 2 (lower is better)
Translates to: VRGLATLAAGRGLNVYSSPKPTR*AGAGPM
Trigger: CATGGGCCCAGCCCCTGCCCATCTAGTTGGTTTGGG...TGATGAATAAACGTTCAACCCTCGGCCTGCAGCCAGAGTAGCCAGGCCGCGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324685.11
ENST00000357890.9
3UTR-3UTR CCA 90 bp AGTTCAGGCCGGCCTTTGGCCAGCGCAACCGGGAAACTAGCTCTCTCTCCGAGAGAAGGAAAGTCTTCCTaGGGCCTGCAGCCCAGTCTC +
Preference number: 2 (lower is better)
Translates to: SSGRPLASATGKLALSPREGKSS*GLQPSL
Trigger: GAGACTGGGCTGCAGGCCCCAGGAAGACTTTCCTTC...TCTCGGAGAGAGAGCTAGTTTCCCGGTTGCGCTGGCCAAAGGCCGGCCTGAACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324685.11
3UTR-3UTR CCA 90 bp ACAAGCATCTCTAGAACAGAGGCTGTGGGTCCAAACGGGTCCCTGCAGCTCCAAGCTGCAGCTCTGACCTaGGGTGGGGAGGAGATGGGG +
Preference number: 2 (lower is better)
Translates to: TSISRTEAVGPNGSLQLQAAALT*GGEEMG
Trigger: CCCCATCTCCTCCCCACCCCAGGTCAGAGCTGCAGC...TTGGAGCTGCAGGGACCCGTTTGGACCCACAGCCTCTGTTCTAGAGATGCTTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602784.1
3UTR-3UTR GCA 90 bp GGGTACCTCCTTCAGCCCTTGGCACAAGAGCCAGACCAAGGTGTCCAGGGAACTGCTTGGCTGATCCCATaGCCACTAGCATGCACCAGG +
Preference number: 2 (lower is better)
Translates to: GYLLQPLAQEPDQGVQGTAWLIP*PLACTR
Trigger: CCTGGTGCATGCTAGTGGGCATGGGATCAGCCAAGC...AGTTCCCTGGACACCTTGGTCTGGCTCTTGTGCCAAGGGCTGAAGGAGGTACCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
3UTR-3UTR GCA 90 bp CCCCCATCTGCCAAGAGGGTACCTCCTTCAGCCCTTGGCACAAGAGCCAGACCATTTTCTGTAGGGCAGTaGCCCCTAGGCTGCAGCTCT +
Preference number: 2 (lower is better)
Translates to: PPSAKRVPPSALGTRARPFSVGQ*PLGCSS
Trigger: AGAGCTGCAGCCTAGGGGGCACTGCCCTACAGAAAA...TGGTCTGGCTCTTGTGCCAAGGGCTGAAGGAGGTACCCTCTTGGCAGATGGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
ENST00000602784.1
3UTR-3UTR GCA 90 bp GCAGGCAGACAGGACACAGGCTCAGTCACAGGGTGTCAGGGGGAAGCTCTTCTAGGAAGCTCAGTCAAGTaGTCTGGGCTCCTCAGGCCT +
Preference number: 2 (lower is better)
Translates to: AGRQDTGSVTGCQGEALLGSSVK*SGLLRP
Trigger: AGGCCTGAGGAGCCCAGAGCACTTGACTGAGCTTCC...TAGAAGAGCTTCCCCCTGACACCCTGTGACTGAGCCTGTGTCCTGTCTGCCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
ENST00000602784.1
3UTR-3UTR GCA 90 bp CTGAGAAGCGGTCCGCAGGATCCAGTTCAGGCCGGCCTTTGGCCAGCGCAACCGAACCTCCTAACCATGTaGGGACCAGGAACTACACTT +
Preference number: 2 (lower is better)
Translates to: LRSGPQDPVQAGLWPAQPNLLTM*GPGTTL
Trigger: AAGTGTAGTTCCTGGTCCGCACATGGTTAGGAGGTT...CGGTTGCGCTGGCCAAAGGCCGGCCTGAACTGGATCCTGCGGACCGCTTCTCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324685.11
3UTR-3UTR CCA 90 bp TCCACTGTAGTTAAGGCCACCAGGATGAAAGCAGGGTTAGGTCCAGGGACCCAGCCATGGGGTCCGGAATaGAGGGTGGGGCCACTAGAC +
Preference number: 2 (lower is better)
Translates to: STVVKATRMKAGLGPGTQPWGPE*RVGPLD
Trigger: GTCTAGTGGCCCCACCCTCCATTCCGGACCCCATGG...CTGGGTCCCTGGACCTAACCCTGCTTTCATCCTGGTGGCCTTAACTACAGTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
3UTR-3UTR CCA 90 bp AGCTCCAACCCTCTGGCCTCTCCGGGCACTGCCCTCACAGCCGATGGAGCATGGCAAGGAACAAGGACATaGCTCACTGGTCCTCATTTG +
Preference number: 2 (lower is better)
Translates to: SSNPLASPGTALTADGAWQGTRT*LTGPHL
Trigger: CAAATGAGGACCAGTGAGCCATGTCCTTGTTCCTTG...CCATGCTCCATCGGCTGTGAGGGCAGTGCCCGGAGAGGCCAGAGGGTTGGAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
ENST00000602784.1
3UTR-3UTR CCA 90 bp TTAGGATGCATCCACGGAGACAGACAGGTTAGGGCCAGTTTCCGGGAAGCTCAGAGCTCTGACCTGGGGTaGGGAGGAGATGGGGGCACA +
Preference number: 2 (lower is better)
Translates to: LGCIHGDRQVRASFREAQSSDLG*GGDGGT
Trigger: TGTGCCCCCATCTCCTCCCCACCCCAGGTCAGAGCT...CTGAGCTTCCCGGAAACTGGCCCTAACCTGTCTGTCTCCGTGGATGCATCCTAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000602784.1
3UTR-3UTR CCA 90 bp GTCCAGGGAACTCCACAGGACAGAAGCCCTGCCGAGGTTAGGGGGATGGTGGGTAGATGGAACGAAGCTTaGCTGATCCCATGCCCACTA +
Preference number: 2 (lower is better)
Translates to: VQGTPQDRSPAEVRGMVGRWNEA*LIPCPL
Trigger: TAGTGGGCATGGGATCAGCCAAGCTTCGTTCCATCT...ACCCACCATCCCCCTAACCTCGGCAGGGCTTCTGTCCTGTGGAGTTCCCTGGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
3UTR-3UTR CCA 90 bp TTAAGTCTGAGCCCTCCCAGGCTCACACCAAGCCAGCAAAGTGCTGCTCAGCTGCTAGAACAGAGGCTGTaGGTCCAAACGGGTCCCTGC +
Preference number: 2 (lower is better)
Translates to: LSLSPPRLTPSQQSAAQLLEQRL*VQTGPC
Trigger: GCAGGGACCCGTTTGGACCCACAGCCTCTGTTCTAG...CAGCTGAGCAGCACTTTGCTGGCTTGGTGTGAGCCTGGGAGGGCTCAGACTTAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324685.11
3UTR-3UTR GCA 90 bp TTAAGTCTGAGCCCTCCCAGGCTCACACCAAGCCAGCAAAGTGCTGCTCAGCTGTTTTCTGTAGGGCAGTaGCCCCTAGGCTGCAGCTCT +
Preference number: 2 (lower is better)
Translates to: LSLSPPRLTPSQQSAAQLFSVGQ*PLGCSS
Trigger: AGAGCTGCAGCCTAGGGGGCACTGCCCTACAGAAAA...CAGCTGAGCAGCACTTTGCTGGCTTGGTGTGAGCCTGGGAGGGCTCAGACTTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324685.11
3UTR-3UTR GCA 90 bp CCCCCATCTGCCAAGAGGGTACCTCCTTCAGCCCTTGGCACAAGAGCCAGACCATCCTTAGGGTTAGGATaGATCCACGGAGACAGACAG +
Preference number: 2 (lower is better)
Translates to: PPSAKRVPPSALGTRARPSLGLG*IHGDRQ
Trigger: CTGTCTGTCTCCGTGGATGCATCCTAACCCTAAGGA...TGGTCTGGCTCTTGTGCCAAGGGCTGAAGGAGGTACCCTCTTGGCAGATGGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
ENST00000602784.1
3UTR-3UTR CCA 90 bp GCCAAGAGGGTACCTCCTTCAGCCCTTGGCACAAGAGCCAGACCAAGGTGTCCACCGAGGTTAGGGGGATaGTGGGTGAAGGAAAGTCTT +
Preference number: 2 (lower is better)
Translates to: AKRVPPSALGTRARPRCPPRLGG*WVKESL
Trigger: AAGACTTTCCTTCACCCACCATCCCCCTAACCTCGG...TGGACACCTTGGTCTGGCTCTTGTGCCAAGGGCTGAAGGAGGTACCCTCTTGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
ENST00000602784.1
3UTR-3UTR GCA 90 bp AAGAGGGTACCTCCTTCAGCCCTTGGCACAAGAGCCAGACCAAGGTGTCCAGGGTCCTTAGGGTTAGGATaGATCCACGGAGACAGACAG +
Preference number: 2 (lower is better)
Translates to: KRVPPSALGTRARPRCPGSLGLG*IHGDRQ
Trigger: CTGTCTGTCTCCGTGGATGCATCCTAACCCTAAGGA...CCCTGGACACCTTGGTCTGGCTCTTGTGCCAAGGGCTGAAGGAGGTACCCTCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
ENST00000602784.1
3UTR-3UTR CCA 90 bp TGTTGGTTCAGCACCTGCAAGATGAGGAAGGTGACTGCAGCAACCTTAGAGCTTCCACTAGACCTGGGGTaGGGAGGAGATGGGGGCACA +
Preference number: 2 (lower is better)
Translates to: CWFSTCKMRKVTAATLELPLDLG*GGDGGT
Trigger: TGTGCCCCCATCTCCTCCCCACCCCAGGTCTAGTGG...AAGCTCTAAGGTTGCTGCAGTCACCTTCCTCATCTTGCAGGTGCTGAACCAACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
3UTR-3UTR CCA 90 bp TTGGGAAGGGGCCTGATTAGAATAGAAACTGATGATGTTGGTTCAGCACCTGCACAGGGGCTGGGCCCATaGGGTCCGGAATGGAGGGTG +
Preference number: 2 (lower is better)
Translates to: LGRGLIRIETDDVGSAPAQGLGP*GPEWRV
Trigger: CACCCTCCATTCCGGACCCCATGGGCCCAGCCCCTG...TGCAGGTGCTGAACCAACATCATCAGTTTCTATTCTAATCAGGCCCCTTCCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
3UTR CAA 90 bp GGGTGGCCTTTAGCGCAGATATCTAGAGAGACGATGCGGAATTACTaGGCATCTACTCAAGAGCCCAGGCGAAGGCTACTCCTGGAAGGG +
Preference number: 2 (lower is better)
Translates to: GWPLAQISRETMRNY*ASTQEPRRRLLLEG
Trigger: CCCTTCCAGGAGTAGCCTTCGCCTGGGCTCTTGAGTAGATGCCAAGTAATTCCGCATCGTCTCTCTAGATATCTGCGCTAAAGGCCACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324685.11
3UTR-3UTR TCA 90 bp GGCCTGGCTACTCTGGCTGCAGGCCGAGGGTTGAACGTTTATTCATCACAATTAACTGGTCCTCATTTGTaGGCCAGTAGGCAGGGAGCG +
Preference number: 2 (lower is better)
Translates to: GLATLAAGRGLNVYSSQLTGPHL*ASRQGA
Trigger: CGCTCCCTGCCTACTGGCTCACAAATGAGGACCAGT...TAATTGTGATGAATAAACGTTCAACCCTCGGCCTGCAGCCAGAGTAGCCAGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324685.11
ENST00000357890.9
3UTR-3UTR GCA 90 bp AACAAGGAACAAGGACATGGCTCACTGGTCCTCATTTGTGAGCCAGTAGGCAGGGCTTGGCTGATCCCATaGCCACTAGCATGCACCAGG +
Preference number: 2 (lower is better)
Translates to: NKEQGHGSLVLICEPVGRAWLIP*PLACTR
Trigger: CCTGGTGCATGCTAGTGGGCATGGGATCAGCCAAGC...CCTGCCTACTGGCTCACAAATGAGGACCAGTGAGCCATGTCCTTGTTCCTTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
3UTR-3UTR GCA 90 bp TCCCTTCCCCTCCTGGGAAGTTCCACCTCCACTGTAGTTAAGGCCACCAGGATGTCCTTAGGGTTAGGATaGATCCACGGAGACAGACAG +
Preference number: 2 (lower is better)
Translates to: SLPLLGSSTSTVVKATRMSLGLG*IHGDRQ
Trigger: CTGTCTGTCTCCGTGGATGCATCCTAACCCTAAGGA...CATCCTGGTGGCCTTAACTACAGTGGAGGTGGAACTTCCCAGGAGGGGAAGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
ENST00000602784.1
3UTR-3UTR GCA 90 bp TGGTTCAGCACCTGCAAGATGAGGAAGGTGACTGCAGCAACCTTAGAGCTTCCCAGTGATGCCCCCATCTaGCAAGAGGGTACCTCCTTC +
Preference number: 2 (lower is better)
Translates to: WFSTCKMRKVTAATLELPSDAPI*QEGTSF
Trigger: GAAGGAGGTACCCTCTTGGCAGATGGGGGCATCACT...GGGAAGCTCTAAGGTTGCTGCAGTCACCTTCCTCATCTTGCAGGTGCTGAACCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
ENST00000602784.1
3UTR-3UTR CCA 90 bp TCCCTTCCCCTCCTGGGAAGTTCCACCTCCACTGTAGTTAAGGCCACCAGGATGAGATGGAACGAAGCTTaGCTGATCCCATGCCCACTA +
Preference number: 2 (lower is better)
Translates to: SLPLLGSSTSTVVKATRMRWNEA*LIPCPL
Trigger: TAGTGGGCATGGGATCAGCCAAGCTTCGTTCCATCT...CATCCTGGTGGCCTTAACTACAGTGGAGGTGGAACTTCCCAGGAGGGGAAGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
3UTR-3UTR CCA 90 bp GCAGGCAGACAGGACACAGGCTCAGTCACAGGGTGTCAGGGGGAAGCTCTTCTACAAGGAACAAGGACATaGCTCACTGGTCCTCATTTG +
Preference number: 2 (lower is better)
Translates to: AGRQDTGSVTGCQGEALLQGTRT*LTGPHL
Trigger: CAAATGAGGACCAGTGAGCCATGTCCTTGTTCCTTG...TAGAAGAGCTTCCCCCTGACACCCTGTGACTGAGCCTGTGTCCTGTCTGCCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
ENST00000602784.1
3UTR-3UTR CCA 90 bp ACAGCCTATACAAGCATCTCTAGAACAGAGGCTGTGGGTCCAAACGGGTCCCTGACCTCCTTCAGCCCTTaGCACAAGAGCCAGACCAAG +
Preference number: 2 (lower is better)
Translates to: TAYTSISRTEAVGPNGSLTSFSP*HKSQTK
Trigger: CTTGGTCTGGCTCTTGTGCCAAGGGCTGAAGGAGGT...CAGGGACCCGTTTGGACCCACAGCCTCTGTTCTAGAGATGCTTGTATAGGCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
ENST00000602784.1
3UTR-3UTR CCA 90 bp GGCCTGGCTACTCTGGCTGCAGGCCGAGGGTTGAACGTTTATTCATCACAATTACTAGAACAGAGGCTGTaGGTCCAAACGGGTCCCTGC +
Preference number: 2 (lower is better)
Translates to: GLATLAAGRGLNVYSSQLLEQRL*VQTGPC
Trigger: GCAGGGACCCGTTTGGACCCACAGCCTCTGTTCTAG...TAATTGTGATGAATAAACGTTCAACCCTCGGCCTGCAGCCAGAGTAGCCAGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324685.11
ENST00000357890.9
3UTR-3UTR CCA 90 bp GGGTGGCCTTTAGCGCAGATATCTAGAGAGACGATGCGGAATTACTTGGCATCTCTCCAGGGGCGAAGGTaGCCGCGTCTCTATGATGCA +
Preference number: 2 (lower is better)
Translates to: GWPLAQISRETMRNYLASLQGRR*PRLYDA
Trigger: TGCATCATAGAGACGCGGCCACCTTCGCCCCTGGAG...AGATGCCAAGTAATTCCGCATCGTCTCTCTAGATATCTGCGCTAAAGGCCACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324685.11
3UTR-3UTR GCA 90 bp AGCACCTGCAAGATGAGGAAGGTGACTGCAGCAACCTTAGAGCTTCCCAAAGGATTTTCTGTAGGGCAGTaGCCCCTAGGCTGCAGCTCT +
Preference number: 2 (lower is better)
Translates to: STCKMRKVTAATLELPKGFSVGQ*PLGCSS
Trigger: AGAGCTGCAGCCTAGGGGGCACTGCCCTACAGAAAA...TCCTTTGGGAAGCTCTAAGGTTGCTGCAGTCACCTTCCTCATCTTGCAGGTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
ENST00000602784.1
3UTR-3UTR GCA 90 bp TTTTCCTTAGGGTTAGGATGCATCCACGGAGACAGACAGGTTAGGGCCAGTTTCGGAAGCTCAGTCAAGTaGTCTGGGCTCCTCAGGCCT +
Preference number: 2 (lower is better)
Translates to: FSLGLGCIHGDRQVRASFGSSVK*SGLLRP
Trigger: AGGCCTGAGGAGCCCAGAGCACTTGACTGAGCTTCC...GAAACTGGCCCTAACCTGTCTGTCTCCGTGGATGCATCCTAACCCTAAGGAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
ENST00000602784.1
3UTR-3UTR GCA 90 bp TGCAGGCCGAGGGTTGAACGTTTATTCATCACAATTAACAGCCTATACAAGCATGGCCTCTCCGGGCACTaGCCTCACAGCCGATGGAGC +
Preference number: 2 (lower is better)
Translates to: CRPRVERLFITINSLYKHGLSGH*PHSRWS
Trigger: GCTCCATCGGCTGTGAGGGCAGTGCCCGGAGAGGCC...ATGCTTGTATAGGCTGTTAATTGTGATGAATAAACGTTCAACCCTCGGCCTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324685.11
ENST00000357890.9
3UTR-3UTR GCA 90 bp GGCCGAGGGTTGAACGTTTATTCATCACAATTAACAGCCTATACAAGCATCTCTGGCCTCTCCGGGCACTaGCCTCACAGCCGATGGAGC +
Preference number: 2 (lower is better)
Translates to: GRGLNVYSSQLTAYTSISGLSGH*PHSRWS
Trigger: GCTCCATCGGCTGTGAGGGCAGTGCCCGGAGAGGCC...AGAGATGCTTGTATAGGCTGTTAATTGTGATGAATAAACGTTCAACCCTCGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000602784.1
3UTR-3UTR TCA 90 bp TGGTTCAGCACCTGCAAGATGAGGAAGGTGACTGCAGCAACCTTAGAGCTTCCCCCTAGGCTGCAGCTCTaGCCTTTAGGAAAAGATGGA +
Preference number: 2 (lower is better)
Translates to: WFSTCKMRKVTAATLELPPRLQL*PLGKDG
Trigger: TCCATCTTTTCCTAAAGGTCAGAGCTGCAGCCTAGG...GGGAAGCTCTAAGGTTGCTGCAGTCACCTTCCTCATCTTGCAGGTGCTGAACCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
3UTR-3UTR CCA 90 bp GAGACGATGCGGAATTACTTGGCATCTACTCAAGAGCCCAGGCGAAGGCTACTCAGGTTAGGGGGATGGTaGGTGAAGGAAAGTCTTCCT +
Preference number: 2 (lower is better)
Translates to: ETMRNYLASTQEPRRRLLRLGGW*VKESLP
Trigger: AGGAAGACTTTCCTTCACCCACCATCCCCCTAACCT...GAGTAGCCTTCGCCTGGGCTCTTGAGTAGATGCCAAGTAATTCCGCATCGTCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324685.11
3UTR-3UTR CCA 90 bp TGGTTCAGCACCTGCAAGATGAGGAAGGTGACTGCAGCAACCTTAGAGCTTCCCAGGTTAGGGGGATGGTaGGTGAAGGAAAGTCTTCCT +
Preference number: 2 (lower is better)
Translates to: WFSTCKMRKVTAATLELPRLGGW*VKESLP
Trigger: AGGAAGACTTTCCTTCACCCACCATCCCCCTAACCT...GGGAAGCTCTAAGGTTGCTGCAGTCACCTTCCTCATCTTGCAGGTGCTGAACCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
ENST00000602784.1
3UTR-3UTR CCA 90 bp ACAGCCTATACAAGCATCTCTAGAACAGAGGCTGTGGGTCCAAACGGGTCCCTGGGGGGTAAATGGGCTTaGCAGAGAAATGGAGATTGG +
Preference number: 2 (lower is better)
Translates to: TAYTSISRTEAVGPNGSLGGKWA*QRNGDW
Trigger: CCAATCTCCATTTCTCTGCCAAGCCCATTTACCCCC...CAGGGACCCGTTTGGACCCACAGCCTCTGTTCTAGAGATGCTTGTATAGGCTGT
52% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
ENST00000602784.1
3UTR CAA 90 bp ACATTTGGGGTGCGCGGCCTGGCTACTCTGGCTGCAGGCCGAGGGTaGAACGTTTATTCATCACAATTAACAGCCTATACAAGCATCTCT +
Preference number: 2 (lower is better)
Translates to: TFGVRGLATLAAGRG*NVYSSQLTAYTSIS
Trigger: AGAGATGCTTGTATAGGCTGTTAATTGTGATGAATAAACGTTCAACCCTCGGCCTGCAGCCAGAGTAGCCAGGCCGCGCACCCCAAATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324685.11
3UTR-3UTR CCA 90 bp TGCAGGCCGAGGGTTGAACGTTTATTCATCACAATTAACAGCCTATACAAGCATCCACTAGACCTGGGGTaGGGAGGAGATGGGGGCACA +
Preference number: 2 (lower is better)
Translates to: CRPRVERLFITINSLYKHPLDLG*GGDGGT
Trigger: TGTGCCCCCATCTCCTCCCCACCCCAGGTCTAGTGG...ATGCTTGTATAGGCTGTTAATTGTGATGAATAAACGTTCAACCCTCGGCCTGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324685.11
ENST00000357890.9
3UTR-3UTR CCA 90 bp TTGGGAAGGGGCCTGATTAGAATAGAAACTGATGATGTTGGTTCAGCACCTGCAGAAGGAAAGTCTTCCTaGGGCCTGCAGCCCAGTCTC +
Preference number: 2 (lower is better)
Translates to: LGRGLIRIETDDVGSAPAEGKSS*GLQPSL
Trigger: GAGACTGGGCTGCAGGCCCCAGGAAGACTTTCCTTC...TGCAGGTGCTGAACCAACATCATCAGTTTCTATTCTAATCAGGCCCCTTCCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
ENST00000602784.1
3UTR-3UTR GCA 90 bp ATGTTGGTTCAGCACCTGCAAGATGAGGAAGGTGACTGCAGCAACCTTAGAGCTTCCTTAGGGTTAGGATaGATCCACGGAGACAGACAG +
Preference number: 2 (lower is better)
Translates to: MLVQHLQDEEGDCSNLRASLGLG*IHGDRQ
Trigger: CTGTCTGTCTCCGTGGATGCATCCTAACCCTAAGGA...AGCTCTAAGGTTGCTGCAGTCACCTTCCTCATCTTGCAGGTGCTGAACCAACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
ENST00000602784.1
3UTR-3UTR TCA 90 bp TATTCATCACAATTAACAGCCTATACAAGCATCTCTAGAACAGAGGCTGTGGGTGAGCCTTGGGATGCATaGGGTGGGGGTAAATGGGCT +
Preference number: 2 (lower is better)
Translates to: YSSQLTAYTSISRTEAVGEPWDA*GGGKWA
Trigger: AGCCCATTTACCCCCACCTCATGCATCCCAAGGCTC...ACCCACAGCCTCTGTTCTAGAGATGCTTGTATAGGCTGTTAATTGTGATGAATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
ENST00000602784.1
3UTR-3UTR GCA 90 bp AAATGGAGATTGGGAAGGGGCCTGATTAGAATAGAAACTGATGATGTTGGTTCAGGAAGCTCAGTCAAGTaGTCTGGGCTCCTCAGGCCT +
Preference number: 2 (lower is better)
Translates to: KWRLGRGLIRIETDDVGSGSSVK*SGLLRP
Trigger: AGGCCTGAGGAGCCCAGAGCACTTGACTGAGCTTCC...TGAACCAACATCATCAGTTTCTATTCTAATCAGGCCCCTTCCCAATCTCCATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
ENST00000602784.1
3UTR-3UTR TCA 90 bp TATTCATCACAATTAACAGCCTATACAAGCATCTCTAGAACAGAGGCTGTGGGTCCCAAAGGAAGCAAGTaGTGCCCCCATCTGCCAAGA +
Preference number: 2 (lower is better)
Translates to: YSSQLTAYTSISRTEAVGPKGSK*CPHLPR
Trigger: TCTTGGCAGATGGGGGCATCACTTGCTTCCTTTGGG...ACCCACAGCCTCTGTTCTAGAGATGCTTGTATAGGCTGTTAATTGTGATGAATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
ENST00000602784.1
3UTR-3UTR CCA 90 bp AAATGGAGATTGGGAAGGGGCCTGATTAGAATAGAAACTGATGATGTTGGTTCACCGAGGTTAGGGGGATaGTGGGTGAAGGAAAGTCTT +
Preference number: 2 (lower is better)
Translates to: KWRLGRGLIRIETDDVGSPRLGG*WVKESL
Trigger: AAGACTTTCCTTCACCCACCATCCCCCTAACCTCGG...TGAACCAACATCATCAGTTTCTATTCTAATCAGGCCCCTTCCCAATCTCCATTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
ENST00000602784.1
3UTR-3UTR CCA 90 bp AAATGGAGATTGGGAAGGGGCCTGATTAGAATAGAAACTGATGATGTTGGTTCACAAGGAACAAGGACATaGCTCACTGGTCCTCATTTG +
Preference number: 2 (lower is better)
Translates to: KWRLGRGLIRIETDDVGSQGTRT*LTGPHL
Trigger: CAAATGAGGACCAGTGAGCCATGTCCTTGTTCCTTG...TGAACCAACATCATCAGTTTCTATTCTAATCAGGCCCCTTCCCAATCTCCATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
ENST00000602784.1
3UTR TCA 72 bp GCACCGGCTCTGGCGCCAGCCCCAGTCCTGCCTCGGTaGAGGATCCGCCCGGGGCGCCTGCAGCGCGCTGAG +
Preference number: 3 (lower is better)
Translates to: APALAPAPVLPR*RIRPGRLQRAE
Trigger: CTCAGCGCGCTGCAGGCGCCCCGGGCGGATCCTTCACCGAGGCAGGACTGGGGCTGGCGCCAGAGCCGGTGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324685.11
3UTR GCA 72 bp ACCGCTCCGCACCGGCTCTGGCGCCAGCCCCAGTCCTaGCTCGGTGAAGGATCCGCCCGGGGCGCCTGCAGC +
Preference number: 3 (lower is better)
Translates to: TAPHRLWRQPQS*LGEGSARGACS
Trigger: GCTGCAGGCGCCCCGGGCGGATCCTTCACCGAGGCAGGACTGGGGCTGGCGCCAGAGCCGGTGCGGAGCGGT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324685.11
3UTR GCA 72 bp CAGTCCTGCCTCGGTGAAGGATCCGCCCGGGGCGCCTaGAGCGCGCTGAGCCCAGGGGCGCCGCTCGGTACA +
Preference number: 3 (lower is better)
Translates to: QSCLGEGSARGA*SALSPGAPLGT
Trigger: TGTACCGAGCGGCGCCCCTGGGCTCAGCGCGCTGCAGGCGCCCCGGGCGGATCCTTCACCGAGGCAGGACTG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324685.11
3UTR GCA 72 bp CCATCGGCACTTTCTCTGCGGCCCGATGTCCTCCCCTaGCGCGGCCCGCGCTTCCACCAGCGTGCCCGCCGC +
Preference number: 3 (lower is better)
Translates to: PSALSLRPDVLP*RGPRFHQRARR
Trigger: GCGGCGGGCACGCTGGTGGAAGCGCGGGCCGCGGCAGGGGAGGACATCGGGCCGCAGAGAAAGTGCCGATGG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324685.11
3UTR GCA 72 bp CCTCGCACCGCTGCCCCAGGCCATCGGCACTTTCTCTaGGGCCCGATGTCCTCCCCTGCCGCGGCCCGCGCT +
Preference number: 3 (lower is better)
Translates to: PRTAAPGHRHFL*GPMSSPAAARA
Trigger: AGCGCGGGCCGCGGCAGGGGAGGACATCGGGCCGCAGAGAAAGTGCCGATGGCCTGGGGCAGCGGTGCGAGG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324685.11
3UTR CCA 72 bp TGCCCGCCGCCGCCGGCCCTACGCCCGAGGTCACCGTaGCGGCCCGCGTCTCCTTCTCCAGTTCGTCCTGGT +
Preference number: 3 (lower is better)
Translates to: CPPPPALRPRSP*RPASPSPVRPG
Trigger: ACCAGGACGAACTGGAGAAGGAGACGCGGGCCGCCACGGTGACCTCGGGCGTAGGGCCGGCGGCGGCGGGCA
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324685.11
3UTR TCA 72 bp GGCCCCTGCCGTGGCCATAGCACTGTCGCCAGCGCCTaGACCAACACCGCTCCGCACCGGCTCTGGCGCCAG +
Preference number: 3 (lower is better)
Translates to: GPCRGHSTVASA*TNTAPHRLWRQ
Trigger: CTGGCGCCAGAGCCGGTGCGGAGCGGTGTTGGTTCAGGCGCTGGCGACAGTGCTATGGCCACGGCAGGGGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324685.11
3UTR TCA 72 bp GGATGCAGCCCGAGGAGTCCCGGCATCCCCCGGCCATaGCAGCCAAGGACGTGGTCAGACCGGGGTCGGTGG +
Preference number: 3 (lower is better)
Translates to: GCSPRSPGIPRP*QPRTWSDRGRW
Trigger: CCACCGACCCCGGTCTGACCACGTCCTTGGCTGTCATGGCCGGGGGATGCCGGGACTCCTCGGGCTGCATCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324685.11
3UTR CCA 72 bp GGCTACTCCTGGAAGGGGACCGCGCTTACGGAGGCCTaGCTGACCTCCACCCGTGACCGGTGCGGCGCTCCT +
Preference number: 3 (lower is better)
Translates to: GYSWKGTALTEA*LTSTRDRCGAP
Trigger: AGGAGCGCCGCACCGGTCACGGGTGGAGGTCAGCCAGGCCTCCGTAAGCGCGGTCCCCTTCCAGGAGTAGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324685.11
3UTR-3UTR CAA 90 bp GGGCGCCGCTCGGTACACGCCGCACCGCTCCCGAGGCCGATTGCAACGAGGGAAGGACCCAGTAGAGCCTaGGGATGCATGAGGTGGGGG +
Preference number: 3 (lower is better)
Translates to: GRRSVHAAPLPRPIATREGPSRA*GCMRWG
Trigger: CCCCCACCTCATGCATCCCAAGGCTCTACTGGGTCC...TTCCCTCGTTGCAATCGGCCTCGGGAGCGGTGCGGCGTGTACCGAGCGGCGCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324685.11
3UTR TCA 72 bp ACTCCTGGAAGGGGACCGCGCTTACGGAGGCCTGGCTaGCCTCCACCCGTGACCGGTGCGGCGCTCCTGAGA +
Preference number: 3 (lower is better)
Translates to: TPGRGPRLRRPG*PPPVTGAALLR
Trigger: TCTCAGGAGCGCCGCACCGGTCACGGGTGGAGGTCAGCCAGGCCTCCGTAAGCGCGGTCCCCTTCCAGGAGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324685.11
3UTR GCA 72 bp CCGCTCGGTACACGCCGCACCGCTCCCGAGGCCGATTaGAACGAGGGAAGTCACCCAGCTGAGGTGTCCCGA +
Preference number: 3 (lower is better)
Translates to: PLGTRRTAPEAD*NEGSHPAEVSR
Trigger: TCGGGACACCTCAGCTGGGTGACTTCCCTCGTTGCAATCGGCCTCGGGAGCGGTGCGGCGTGTACCGAGCGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324685.11
3UTR GCA 72 bp ACCACGCTCTCCCCTTCAGGCCCAGTCCGGGATCCCTaGCGGCCGTTAAGTCTGAGCCCTCCCAGGCTCACA +
Preference number: 3 (lower is better)
Translates to: TTLSPSGPVRDP*RPLSLSPPRLT
Trigger: TGTGAGCCTGGGAGGGCTCAGACTTAACGGCCGGCAGGGATCCCGGACTGGGCCTGAAGGGGAGAGCGTGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324685.11
3UTR CCA 72 bp TGTGGGTCCAAACGGGTCCCTGCAGCTCCAACCCTCTaGCCTCTCCGGGCACTGCCCTCACAGCCGATGGAG +
Preference number: 3 (lower is better)
Translates to: CGSKRVPAAPTL*PLRALPSQPME
Trigger: CTCCATCGGCTGTGAGGGCAGTGCCCGGAGAGGCCAGAGGGTTGGAGCTGCAGGGACCCGTTTGGACCCACA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
ENST00000602784.1
3UTR GCA 72 bp TCTCTAGAACAGAGGCTGTGGGTCCAAACGGGTCCCTaGAGCTCCAACCCTCTGGCCTCTCCGGGCACTGCC +
Preference number: 3 (lower is better)
Translates to: SLEQRLWVQTGP*SSNPLASPGTA
Trigger: GGCAGTGCCCGGAGAGGCCAGAGGGTTGGAGCTGCAGGGACCCGTTTGGACCCACAGCCTCTGTTCTAGAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
ENST00000602784.1
3UTR GCA 72 bp GGGCGAAGGTGGCCGCGTCTCTATGATGCAATATCCTaGGTTTTTCCCACCCTCGCACCGCTGCCCCAGGCC +
Preference number: 3 (lower is better)
Translates to: GRRWPRLYDAIS*VFPTLAPLPQA
Trigger: GGCCTGGGGCAGCGGTGCGAGGGTGGGAAAAACGCAGGATATTGCATCATAGAGACGCGGCCACCTTCGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324685.11
3UTR CCA 72 bp GCTCAGCTGCTGCAGCTAAAATCGGGGGACTACATTTaGGGTGCGCGGCCTGGCTACTCTGGCTGCAGGCCG +
Preference number: 3 (lower is better)
Translates to: AQLLQLKSGDYI*GARPGYSGCRP
Trigger: CGGCCTGCAGCCAGAGTAGCCAGGCCGCGCACCCCAAATGTAGTCCCCCGATTTTAGCTGCAGCAGCTGAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324685.11
3UTR CCA 72 bp TGGCATCTACTCAAGAGCCCAGGCGAAGGCTACTCCTaGAAGGGGACCGCGCTTACGGAGGCCTGGCTGACC +
Preference number: 3 (lower is better)
Translates to: WHLLKSPGEGYS*KGTALTEAWLT
Trigger: GGTCAGCCAGGCCTCCGTAAGCGCGGTCCCCTTCCAGGAGTAGCCTTCGCCTGGGCTCTTGAGTAGATGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324685.11
3UTR-3UTR CAA 90 bp AGTTCAGGCCGGCCTTTGGCCAGCGCAACCGGGAAACTAGCTCTCTCTCCGAGAATCGGGGGACTACATTaGGGGTGCGCGGCCTGGCTA +
Preference number: 3 (lower is better)
Translates to: SSGRPLASATGKLALSPRIGGLH*GCAAWL
Trigger: TAGCCAGGCCGCGCACCCCAAATGTAGTCCCCCGAT...TCTCGGAGAGAGAGCTAGTTTCCCGGTTGCGCTGGCCAAAGGCCGGCCTGAACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324685.11
3UTR CCA 72 bp GCTGGAATGATTGGAAGTTGGCCCAGCGGCTGGGGCTaGTCTGTCCCTTCCCCTCCTGGGAAGTTCCACCTC +
Preference number: 3 (lower is better)
Translates to: AGMIGSWPSGWG*SVPSPPGKFHL
Trigger: GAGGTGGAACTTCCCAGGAGGGGAAGGGACAGACCAGCCCCAGCCGCTGGGCCAACTTCCAATCATTCCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
ENST00000602784.1
3UTR TCA 72 bp TCCCGAGGCCGATTGCAACGAGGGAAGTCACCCAGCTaGGGTGTCCCGATCTGTGCATTCGAGTGGTGTGGG +
Preference number: 3 (lower is better)
Translates to: SRGRLQRGKSPS*GVPICAFEWCG
Trigger: CCCACACCACTCGAATGCACAGATCGGGACACCTCAGCTGGGTGACTTCCCTCGTTGCAATCGGCCTCGGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324685.11
3UTR TCA 72 bp TGGCGCTCTCCAGGGGCGAAGGTGGCCGCGTCTCTATaGTGCAATATCCTGCGTTTTTCCCACCCTCGCACC +
Preference number: 3 (lower is better)
Translates to: WRSPGAKVAASL*CNILRFSHPRT
Trigger: GGTGCGAGGGTGGGAAAAACGCAGGATATTGCATCATAGAGACGCGGCCACCTTCGCCCCTGGAGAGCGCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324685.11
3UTR CCA 72 bp AGGGTGTCAGGGGGAAGCTCTTCTAGCTGGAATGATTaGAAGTTGGCCCAGCGGCTGGGGCTGGTCTGTCCC +
Preference number: 3 (lower is better)
Translates to: RVSGGSSSSWND*KLAQRLGLVCP
Trigger: GGGACAGACCAGCCCCAGCCGCTGGGCCAACTTCCAATCATTCCAGCTAGAAGAGCTTCCCCCTGACACCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
ENST00000602784.1
3UTR-3UTR CAA 90 bp AGGTGGCCGCGTCTCTATGATGCAATATCCTGCGTTTTTCCCACCCTCGCACCGAGTTCAGGCCGGCCTTaGGCCAGCGCAACCGGGAAA +
Preference number: 3 (lower is better)
Translates to: RWPRLYDAISCVFPTLAPSSGRP*ASATGK
Trigger: TTTCCCGGTTGCGCTGGCCAAAGGCCGGCCTGAACT...CGGTGCGAGGGTGGGAAAAACGCAGGATATTGCATCATAGAGACGCGGCCACCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324685.11
3UTR CCA 72 bp GGCGCTCCTGAGACTGGCGCTCTCCAGGGGCGAAGGTaGCCGCGTCTCTATGATGCAATATCCTGCGTTTTT +
Preference number: 3 (lower is better)
Translates to: GAPETGALQGRR*PRLYDAISCVF
Trigger: AAAAACGCAGGATATTGCATCATAGAGACGCGGCCACCTTCGCCCCTGGAGAGCGCCAGTCTCAGGAGCGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324685.11
3UTR-3UTR CAA 90 bp GCAGGCAGACAGGACACAGGCTCAGTCACAGGGTGTCAGGGGGAAGCTCTTCTATACCTCCTTCAGCCCTaGGCACAAGAGCCAGACCAA +
Preference number: 3 (lower is better)
Translates to: AGRQDTGSVTGCQGEALLYLLQP*AQEPDQ
Trigger: TTGGTCTGGCTCTTGTGCCAAGGGCTGAAGGAGGTA...TAGAAGAGCTTCCCCCTGACACCCTGTGACTGAGCCTGTGTCCTGTCTGCCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
ENST00000602784.1
3UTR GCA 72 bp TGGAACGAAGCTTGGCTGATCCCATGCCCACTAGCATaGACCAGGGTCCCCAAACCAACTAGATGGGCAGGG +
Preference number: 3 (lower is better)
Translates to: WNEAWLIPCPLA*TRVPKPTRWAG
Trigger: CCCTGCCCATCTAGTTGGTTTGGGGACCCTGGTGCATGCTAGTGGGCATGGGATCAGCCAAGCTTCGTTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
3UTR GCA 72 bp GAGCCCTCCCAGGCTCACACCAAGCCAGCAAAGTGCTaGTCAGCTGCTGCAGCTAAAATCGGGGGACTACAT +
Preference number: 3 (lower is better)
Translates to: EPSQAHTKPAKC*SAAAAKIGGLH
Trigger: ATGTAGTCCCCCGATTTTAGCTGCAGCAGCTGAGCAGCACTTTGCTGGCTTGGTGTGAGCCTGGGAGGGCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324685.11
3UTR GCA 72 bp TCTGAGCCCTCCCAGGCTCACACCAAGCCAGCAAAGTaGTGCTCAGCTGCTGCAGCTAAAATCGGGGGACTA +
Preference number: 3 (lower is better)
Translates to: SEPSQAHTKPAK*CSAAAAKIGGL
Trigger: TAGTCCCCCGATTTTAGCTGCAGCAGCTGAGCAGCACTTTGCTGGCTTGGTGTGAGCCTGGGAGGGCTCAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324685.11
3UTR-3UTR CAA 90 bp AAGAGGGTACCTCCTTCAGCCCTTGGCACAAGAGCCAGACCAAGGTGTCCAGGGAAGATGGAACGAAGCTaGGCTGATCCCATGCCCACT +
Preference number: 3 (lower is better)
Translates to: KRVPPSALGTRARPRCPGKMERS*ADPMPT
Trigger: AGTGGGCATGGGATCAGCCAAGCTTCGTTCCATCTT...CCCTGGACACCTTGGTCTGGCTCTTGTGCCAAGGGCTGAAGGAGGTACCCTCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
3UTR CCA 72 bp TTAGGGCCAGTTTCCGGGAAGCTCAGTCAAGTGCTCTaGGCTCCTCAGGCCTCTCAGGCAGACCTTTTCTGT +
Preference number: 3 (lower is better)
Translates to: LGPVSGKLSQVL*APQASQADLFC
Trigger: ACAGAAAAGGTCTGCCTGAGAGGCCTGAGGAGCCCAGAGCACTTGACTGAGCTTCCCGGAAACTGGCCCTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
ENST00000602784.1
3UTR-3UTR CAA 90 bp TTACTTGGCATCTACTCAAGAGCCCAGGCGAAGGCTACTCCTGGAAGGGGACCGAAGATGGAACGAAGCTaGGCTGATCCCATGCCCACT +
Preference number: 3 (lower is better)
Translates to: LLGIYSRAQAKATPGRGPKMERS*ADPMPT
Trigger: AGTGGGCATGGGATCAGCCAAGCTTCGTTCCATCTT...CGGTCCCCTTCCAGGAGTAGCCTTCGCCTGGGCTCTTGAGTAGATGCCAAGTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324685.11
3UTR GCA 72 bp GAAACTAGCTCTCTCTCCGAGAACCTCCTAACCATGTaGGGACCAGGAACTACACTTCCCAGGATGCAGCCC +
Preference number: 3 (lower is better)
Translates to: ETSSLSENLLTM*GPGTTLPRMQP
Trigger: GGGCTGCATCCTGGGAAGTGTAGTTCCTGGTCCGCACATGGTTAGGAGGTTCTCGGAGAGAGAGCTAGTTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324685.11
3UTR CCA 72 bp CGAGGAGAGTTTTGCCCCTCTGATAAGGAGACCGGGTaGCCTTTAGCGCAGATATCTAGAGAGACGATGCGG +
Preference number: 3 (lower is better)
Translates to: RGEFCPSDKETG*PLAQISRETMR
Trigger: CCGCATCGTCTCTCTAGATATCTGCGCTAAAGGCCACCCGGTCTCCTTATCAGAGGGGCAAAACTCTCCTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324685.11
3UTR GCA 72 bp GACTACATTTGGGGTGCGCGGCCTGGCTACTCTGGCTaGAGGCCGAGGGTTGAACGTTTATTCATCACAATT +
Preference number: 3 (lower is better)
Translates to: DYIWGARPGYSG*RPRVERLFITI
Trigger: AATTGTGATGAATAAACGTTCAACCCTCGGCCTGCAGCCAGAGTAGCCAGGCCGCGCACCCCAAATGTAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324685.11
3UTR CCA 72 bp GCAGCTCTGACCTTTAGGAAAAGATGGAACGAAGCTTaGCTGATCCCATGCCCACTAGCATGCACCAGGGTC +
Preference number: 3 (lower is better)
Translates to: AALTFRKRWNEA*LIPCPLACTRV
Trigger: GACCCTGGTGCATGCTAGTGGGCATGGGATCAGCCAAGCTTCGTTCCATCTTTTCCTAAAGGTCAGAGCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
3UTR GCA 72 bp TTTAGGAAAAGATGGAACGAAGCTTGGCTGATCCCATaGCCACTAGCATGCACCAGGGTCCCCAAACCAACT +
Preference number: 3 (lower is better)
Translates to: FRKRWNEAWLIP*PLACTRVPKPT
Trigger: AGTTGGTTTGGGGACCCTGGTGCATGCTAGTGGGCATGGGATCAGCCAAGCTTCGTTCCATCTTTTCCTAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
3UTR GCA 72 bp ACTTTTATTAGGTATGAAGACCCACGAGGAGAGTTTTaGCCCTCTGATAAGGAGACCGGGTGGCCTTTAGCG +
Preference number: 3 (lower is better)
Translates to: TFIRYEDPRGEF*PSDKETGWPLA
Trigger: CGCTAAAGGCCACCCGGTCTCCTTATCAGAGGGGCAAAACTCTCCTCGTGGGTCTTCATACCTAATAAAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324685.11
3UTR-3UTR CAA 90 bp GGCCGAGGGTTGAACGTTTATTCATCACAATTAACAGCCTATACAAGCATCTCTAAGATGGAACGAAGCTaGGCTGATCCCATGCCCACT +
Preference number: 3 (lower is better)
Translates to: GRGLNVYSSQLTAYTSISKMERS*ADPMPT
Trigger: AGTGGGCATGGGATCAGCCAAGCTTCGTTCCATCTT...AGAGATGCTTGTATAGGCTGTTAATTGTGATGAATAAACGTTCAACCCTCGGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324685.11
ENST00000357890.9
CDS-3UTR TCA 90 bp CGCGACGACCACCACGCTCTCCCCTTCAGGCCCAGTCCGGGATCCCTGCCGGCCCCAGTCCTGCCTCGGTaGAGGATCCGCCCGGGGCGC +
Preference number: 4 (lower is better)
Translates to: RDDHHALPFRPSPGSLPAPVLPR*RIRPGR
Trigger: GCGCCCCGGGCGGATCCTTCACCGAGGCAGGACTGG...GGCCGGCAGGGATCCCGGACTGGGCCTGAAGGGGAGAGCGTGGTGGTCGTCGCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000324685.11
CDS-3UTR GCA 90 bp CTCTGGCGCCAGCCCCAGTCCTGCCTCGGTGAAGGATCCGCCCGGGGCGCCTGCCGGCGGCGCGTTTGTTaGCTGGCCCAGACATGGCCG +
Preference number: 4 (lower is better)
Translates to: LWRQPQSCLGEGSARGACRRRVC*LAQTWP
Trigger: CGGCCATGTCTGGGCCAGGCAACAAACGCGCCGCCG...GCAGGCGCCCCGGGCGGATCCTTCACCGAGGCAGGACTGGGGCTGGCGCCAGAG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324685.11
CDS-3UTR GCA 90 bp CTCTGGCGCCAGCCCCAGTCCTGCCTCGGTGAAGGATCCGCCCGGGGCGCCTGCGACGCACGCGGCCCCTaGCGTGGCCATAGCACTGTC +
Preference number: 4 (lower is better)
Translates to: LWRQPQSCLGEGSARGACDARGP*RGHSTV
Trigger: GACAGTGCTATGGCCACGGCAGGGGCCGCGTGCGTC...GCAGGCGCCCCGGGCGGATCCTTCACCGAGGCAGGACTGGGGCTGGCGCCAGAG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000324685.11
CDS-3UTR TCA 90 bp CTCTGGCGCCAGCCCCAGTCCTGCCTCGGTGAAGGATCCGCCCGGGGCGCCTGCGGCATCCCCCGGCCATaGCAGCCAAGGACGTGGTCA +
Preference number: 4 (lower is better)
Translates to: LWRQPQSCLGEGSARGACGIPRP*QPRTWS
Trigger: TGACCACGTCCTTGGCTGTCATGGCCGGGGGATGCC...GCAGGCGCCCCGGGCGGATCCTTCACCGAGGCAGGACTGGGGCTGGCGCCAGAG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000324685.11
CDS-3UTR TCA 90 bp ACCGCTCCGCACCGGCTCTGGCGCCAGCCCCAGTCCTGCCTCGGTGAAGGATCCTCTCGGGTGTGTGCCTaGGCCGCCTCACTGAGGGGC +
Preference number: 4 (lower is better)
Translates to: TAPHRLWRQPQSCLGEGSSRVCA*AASLRG
Trigger: GCCCCTCAGTGAGGCGGCTCAGGCACACACCCGAGA...GGATCCTTCACCGAGGCAGGACTGGGGCTGGCGCCAGAGCCGGTGCGGAGCGGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324685.11
CDS-3UTR TCA 90 bp CCTTCAGGCCCAGTCCGGGATCCCTGCCGGCCGTTAAGTCTGAGCCCTCCCAGGCCGGTGCGGCGCTCCTaGGACTGGCGCTCTCCAGGG +
Preference number: 4 (lower is better)
Translates to: PSGPVRDPCRPLSLSPPRPVRRS*DWRSPG
Trigger: CCCTGGAGAGCGCCAGTCTCAGGAGCGCCGCACCGG...CCTGGGAGGGCTCAGACTTAACGGCCGGCAGGGATCCCGGACTGGGCCTGAAGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324685.11
CDS-3UTR GCA 90 bp AGGATGCAGCCCGAGGAGTCCCGGCATCCCCCGGCCATGACAGCCAAGGACGTGCCCGATGTCCTCCCCTaGCGCGGCCCGCGCTTCCAC +
Preference number: 4 (lower is better)
Translates to: RMQPEESRHPPAMTAKDVPDVLP*RGPRFH
Trigger: GTGGAAGCGCGGGCCGCGGCAGGGGAGGACATCGGG...CACGTCCTTGGCTGTCATGGCCGGGGGATGCCGGGACTCCTCGGGCTGCATCCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324685.11
CDS-3UTR TCA 90 bp CTCTGGCGCCAGCCCCAGTCCTGCCTCGGTGAAGGATCCGCCCGGGGCGCCTGCGGGAAGTCACCCAGCTaGGGTGTCCCGATCTGTGCA +
Preference number: 4 (lower is better)
Translates to: LWRQPQSCLGEGSARGACGKSPS*GVPICA
Trigger: TGCACAGATCGGGACACCTCAGCTGGGTGACTTCCC...GCAGGCGCCCCGGGCGGATCCTTCACCGAGGCAGGACTGGGGCTGGCGCCAGAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324685.11
CDS-3UTR CCA 90 bp ACGCACGCGGCCCCTGCCGTGGCCATAGCACTGTCGCCAGCGCCTGAACCAACATGCCTGGCCCAGACATaGCCGCGGCGGCTGGAGCGA +
Preference number: 4 (lower is better)
Translates to: THAAPAVAIALSPAPEPTCLAQT*PRRLER
Trigger: TCGCTCCAGCCGCCGCGGCCATGTCTGGGCCAGGCA...TGTTGGTTCAGGCGCTGGCGACAGTGCTATGGCCACGGCAGGGGCCGCGTGCGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324685.11
CDS-3UTR CCA 90 bp CTCTGGCGCCAGCCCCAGTCCTGCCTCGGTGAAGGATCCGCCCGGGGCGCCTGCGTGGAGGTCCTAGGCTaGGACCTTCCCGTTCCCGAA +
Preference number: 4 (lower is better)
Translates to: LWRQPQSCLGEGSARGACVEVLG*DLPVPE
Trigger: TTCGGGAACGGGAAGGTCCCAGCCTAGGACCTCCAC...GCAGGCGCCCCGGGCGGATCCTTCACCGAGGCAGGACTGGGGCTGGCGCCAGAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324685.11
CDS-3UTR CCA 90 bp GCCCGAGGAGTCCCGGCATCCCCCGGCCATGACAGCCAAGGACGTGGTCAGACCCAGGGGCTGGGCCCATaGGGTCCGGAATGGAGGGTG +
Preference number: 4 (lower is better)
Translates to: ARGVPASPGHDSQGRGQTQGLGP*GPEWRV
Trigger: CACCCTCCATTCCGGACCCCATGGGCCCAGCCCCTG...GGTCTGACCACGTCCTTGGCTGTCATGGCCGGGGGATGCCGGGACTCCTCGGGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324685.11
CDS-3UTR TCA 90 bp CTGCAGCTCCAACCCTCTGGCCTCTCCGGGCACTGCCCTCACAGCCGATGGAGCCCTGAGCCGCCTCACTaGGGGGCTCACTGTCCCCTC +
Preference number: 4 (lower is better)
Translates to: LQLQPSGLSGHCPHSRWSPEPPH*GAHCPL
Trigger: GAGGGGACAGTGAGCCCCTCAGTGAGGCGGCTCAGG...GCTCCATCGGCTGTGAGGGCAGTGCCCGGAGAGGCCAGAGGGTTGGAGCTGCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR GCA 90 bp CTGCAGCTCCAACCCTCTGGCCTCTCCGGGCACTGCCCTCACAGCCGATGGAGCCCACACCCCCGAGGCTaGCCTGCAAGGCTCGCTCCT +
Preference number: 4 (lower is better)
Translates to: LQLQPSGLSGHCPHSRWSPHPRG*PARLAP
Trigger: AGGAGCGAGCCTTGCAGGGCAGCCTCGGGGGTGTGG...GCTCCATCGGCTGTGAGGGCAGTGCCCGGAGAGGCCAGAGGGTTGGAGCTGCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR CCA 90 bp CTGCAGCTCCAACCCTCTGGCCTCTCCGGGCACTGCCCTCACAGCCGATGGAGCCCCAGCGGCTGGGGCTaGTCTGTCCCTTCCCCTCCT +
Preference number: 4 (lower is better)
Translates to: LQLQPSGLSGHCPHSRWSPSGWG*SVPSPP
Trigger: AGGAGGGGAAGGGACAGACCAGCCCCAGCCGCTGGG...GCTCCATCGGCTGTGAGGGCAGTGCCCGGAGAGGCCAGAGGGTTGGAGCTGCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
ENST00000602784.1
CDS-3UTR CCA 90 bp CTCCGGGCACTGCCCTCACAGCCGATGGAGCATGGCTGGGCAGGCAGACAGGACCCCAGCGGCTGGGGCTaGTCTGTCCCTTCCCCTCCT +
Preference number: 4 (lower is better)
Translates to: LRALPSQPMEHGWAGRQDPSGWG*SVPSPP
Trigger: AGGAGGGGAAGGGACAGACCAGCCCCAGCCGCTGGG...GTCCTGTCTGCCTGCCCAGCCATGCTCCATCGGCTGTGAGGGCAGTGCCCGGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
ENST00000602784.1
CDS-3UTR TCA 90 bp CCTTCAGGCCCAGTCCGGGATCCCTGCCGGCCGTTAAGTCTGAGCCCTCCCAGGGGGGTCTCTCAGCTCTaGTGTCCCCGGCTCTGGGAG +
Preference number: 4 (lower is better)
Translates to: PSGPVRDPCRPLSLSPPRGVSQL*CPRLWE
Trigger: CTCCCAGAGCCGGGGACATCAGAGCTGAGAGACCCC...CCTGGGAGGGCTCAGACTTAACGGCCGGCAGGGATCCCGGACTGGGCCTGAAGG
68% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000324685.11
CDS-3UTR GCA 90 bp GCATCCTTCTTGCGGGTGTTACAGCAGGGGCAGGTCAACCGCGCCTGGGCCAGGCCACACCCCCGAGGCTaGCCTGCAAGGCTCGCTCCT +
Preference number: 4 (lower is better)
Translates to: ASFLRVLQQGQVNRAWARPHPRG*PARLAP
Trigger: AGGAGCGAGCCTTGCAGGGCAGCCTCGGGGGTGTGG...CCTGGCCCAGGCGCGGTTGACCTGCCCCTGCTGTAACACCCGCAAGAAGGATGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000567365.2
CDS-3UTR CCA 90 bp AGCTCCAACCCTCTGGCCTCTCCGGGCACTGCCCTCACAGCCGATGGAGCATGGGGCGCGTTTGTTGCCTaGCCCAGACATGGCCGCGGC +
Preference number: 4 (lower is better)
Translates to: SSNPLASPGTALTADGAWGAFVA*PRHGRG
Trigger: GCCGCGGCCATGTCTGGGCCAGGCAACAAACGCGCC...CCATGCTCCATCGGCTGTGAGGGCAGTGCCCGGAGAGGCCAGAGGGTTGGAGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR CCA 90 bp GCCCGAGGAGTCCCGGCATCCCCCGGCCATGACAGCCAAGGACGTGGTCAGACCGCCCCGCCTGCTCGTTaGCCGCCAGATTCTGCTCAA +
Preference number: 4 (lower is better)
Translates to: ARGVPASPGHDSQGRGQTAPPAR*PPDSAQ
Trigger: TTGAGCAGAATCTGGCGGCCAACGAGCAGGCGGGGC...GGTCTGACCACGTCCTTGGCTGTCATGGCCGGGGGATGCCGGGACTCCTCGGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324685.11
CDS-3UTR CCA 90 bp CCTTCAGGCCCAGTCCGGGATCCCTGCCGGCCGTTAAGTCTGAGCCCTCCCAGGAGGTTGGGGGTGGAGTaGGCAGAGCCACTGGCCTGG +
Preference number: 4 (lower is better)
Translates to: PSGPVRDPCRPLSLSPPRRLGVE*AEPLAW
Trigger: CCAGGCCAGTGGCTCTGCCCACTCCACCCCCAACCT...CCTGGGAGGGCTCAGACTTAACGGCCGGCAGGGATCCCGGACTGGGCCTGAAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324685.11
CDS-3UTR CCA 90 bp CTGCAGCTCCAACCCTCTGGCCTCTCCGGGCACTGCCCTCACAGCCGATGGAGCAGTTGGCCCAGCGGCTaGGGCTGGTCTGTCCCTTCC +
Preference number: 4 (lower is better)
Translates to: LQLQPSGLSGHCPHSRWSSWPSG*GWSVPS
Trigger: GGAAGGGACAGACCAGCCCCAGCCGCTGGGCCAACT...GCTCCATCGGCTGTGAGGGCAGTGCCCGGAGAGGCCAGAGGGTTGGAGCTGCAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
ENST00000602784.1
CDS-3UTR CCA 90 bp ACCAGGAACTACACTTCCCAGGATGCAGCCCGAGGAGTCCCGGCATCCCCCGGCTTGGGGTGCGCGGCCTaGCTACTCTGGCTGCAGGCC +
Preference number: 4 (lower is better)
Translates to: TRNYTSQDAARGVPASPGLGCAA*LLWLQA
Trigger: GGCCTGCAGCCAGAGTAGCCAGGCCGCGCACCCCAA...GCCGGGGGATGCCGGGACTCCTCGGGCTGCATCCTGGGAAGTGTAGTTCCTGGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324685.11
CDS-3UTR CCA 90 bp CTGCAGCTCCAACCCTCTGGCCTCTCCGGGCACTGCCCTCACAGCCGATGGAGCGCTGCAGCTCTGACCTaGGGTGGGGAGGAGATGGGG +
Preference number: 4 (lower is better)
Translates to: LQLQPSGLSGHCPHSRWSAAALT*GGEEMG
Trigger: CCCCATCTCCTCCCCACCCCAGGTCAGAGCTGCAGC...GCTCCATCGGCTGTGAGGGCAGTGCCCGGAGAGGCCAGAGGGTTGGAGCTGCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602784.1
CDS-3UTR TCA 90 bp GTCCAGGGAACTCCACAGGACAGAAGCCCTGCCGAGGTTAGGGGGATGGTGGGTCCAAGGCCGGCTCACTaGGAGGGGGCCGCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: VQGTPQDRSPAEVRGMVGPRPAH*EGAAAA
Trigger: TGCAGCTGCGGCCCCCTCTCAGTGAGCCGGCCTTGG...ACCCACCATCCCCCTAACCTCGGCAGGGCTTCTGTCCTGTGGAGTTCCCTGGAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR TCA 90 bp CCGCTCGGTACACGCCGCACCGCTCCCGAGGCCGATTGCAACGAGGGAAGTCACGTCCGCACAGCCCCCTaGAGTTCGGCCTGCAGTTTC +
Preference number: 4 (lower is better)
Translates to: PLGTRRTAPEADCNEGSHVRTAP*SSACSF
Trigger: GAAACTGCAGGCCGAACTTCAGGGGGCTGTGCGGAC...GTGACTTCCCTCGTTGCAATCGGCCTCGGGAGCGGTGCGGCGTGTACCGAGCGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324685.11
CDS-3UTR TCA 90 bp CTGAGAAGCGGTCCGCAGGATCCAGTTCAGGCCGGCCTTTGGCCAGCGCAACCGTCCGCAGGGCCACCTTaGGGCGCTCATTGGTCCGCA +
Preference number: 4 (lower is better)
Translates to: LRSGPQDPVQAGLWPAQPSAGPP*GAHWSA
Trigger: TGCGGACCAATGAGCGCCTCAAGGTGGCCCTGCGGA...CGGTTGCGCTGGCCAAAGGCCGGCCTGAACTGGATCCTGCGGACCGCTTCTCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324685.11
CDS-3UTR TCA 90 bp CTCCGGGCACTGCCCTCACAGCCGATGGAGCATGGCTGGGCAGGCAGACAGGACCATCCACCTGGGACTTaGGGCCAAGGACCTGCTCGC +
Preference number: 4 (lower is better)
Translates to: LRALPSQPMEHGWAGRQDHPPGT*GQGPAR
Trigger: GCGAGCAGGTCCTTGGCCTCAAGTCCCAGGTGGATG...GTCCTGTCTGCCTGCCCAGCCATGCTCCATCGGCTGTGAGGGCAGTGCCCGGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR TCA 90 bp CTTGCGGGTGTTACAGCAGGGGCAGGTCAACCGCGCCTGGGCCAGGCAAAGGCACTTGCGCCGCAGCCGTaGGATGTCCTCCTGAGCCCT +
Preference number: 4 (lower is better)
Translates to: LAGVTAGAGQPRLGQAKALAPQP*DVLLSP
Trigger: AGGGCTCAGGAGGACATCTCACGGCTGCGGCGCAAG...TGCCTTTGCCTGGCCCAGGCGCGGTTGACCTGCCCCTGCTGTAACACCCGCAAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567365.2
CDS-3UTR GCA 90 bp ACGCACGCGGCCCCTGCCGTGGCCATAGCACTGTCGCCAGCGCCTGAACCAACATTGATGGGCCCCGCCTaGTCGTTGGCCGCCAGATTC +
Preference number: 4 (lower is better)
Translates to: THAAPAVAIALSPAPEPTLMGPA*SLAARF
Trigger: GAATCTGGCGGCCAACGAGCAGGCGGGGCCCATCAA...TGTTGGTTCAGGCGCTGGCGACAGTGCTATGGCCACGGCAGGGGCCGCGTGCGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324685.11
CDS-3UTR GCA 90 bp CTCCGGGCACTGCCCTCACAGCCGATGGAGCATGGCTGGGCAGGCAGACAGGACATCTGCTCCTCTGCCTaGCGAATGCGCCGCAGGGCA +
Preference number: 4 (lower is better)
Translates to: LRALPSQPMEHGWAGRQDICSSA*RMRRRA
Trigger: TGCCCTGCGGCGCATTCGGCAGGCAGAGGAGCAGAT...GTCCTGTCTGCCTGCCCAGCCATGCTCCATCGGCTGTGAGGGCAGTGCCCGGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR GCA 90 bp ACCGCTCCGCACCGGCTCTGGCGCCAGCCCCAGTCCTGCCTCGGTGAAGGATCCGCACCCAGCTTGCGCTaGAGGTGTTCTATCTGCTCC +
Preference number: 4 (lower is better)
Translates to: TAPHRLWRQPQSCLGEGSAPSLR*RCSICS
Trigger: GGAGCAGATAGAACACCTGCAGCGCAAGCTGGGTGC...GGATCCTTCACCGAGGCAGGACTGGGGCTGGCGCCAGAGCCGGTGCGGAGCGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324685.11
CDS-3UTR GCA 90 bp CTTCTTGCGGGTGTTACAGCAGGGGCAGGTCAACCGCGCCTGGGCCAGGCAAAGCCCCCGAGGCTGCCCTaGAAGGCTCGCTCCTTCTCC +
Preference number: 4 (lower is better)
Translates to: LLAGVTAGAGQPRLGQAKPPRLP*KARSFS
Trigger: GGAGAAGGAGCGAGCCTTGCAGGGCAGCCTCGGGGG...CTTTGCCTGGCCCAGGCGCGGTTGACCTGCCCCTGCTGTAACACCCGCAAGAAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000567365.2
CDS-3UTR GCA 90 bp CCTTCAGGCCCAGTCCGGGATCCCTGCCGGCCGTTAAGTCTGAGCCCTCCCAGGGCTCCAGGGCTTGGCTaGGCAGCGTCAGCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: PSGPVRDPCRPLSLSPPRAPGLG*AASAPS
Trigger: AGAAGGAGCTGACGCTGCGCAGCCAAGCCCTGGAGC...CCTGGGAGGGCTCAGACTTAACGGCCGGCAGGGATCCCGGACTGGGCCTGAAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324685.11
CDS-3UTR GCA 90 bp CTTGCGGGTGTTACAGCAGGGGCAGGTCAACCGCGCCTGGGCCAGGCAAAGGCATCCCGCAGCCGAGTCTaGACGTGCTCCAGCTGCACC +
Preference number: 4 (lower is better)
Translates to: LAGVTAGAGQPRLGQAKASRSRV*TCSSCT
Trigger: GGTGCAGCTGGAGCACGTGCAGACTCGGCTGCGGGA...TGCCTTTGCCTGGCCCAGGCGCGGTTGACCTGCCCCTGCTGTAACACCCGCAAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567365.2
CDS-3UTR GCA 90 bp GCATCCTTCTTGCGGGTGTTACAGCAGGGGCAGGTCAACCGCGCCTGGGCCAGGAGCAGCCCGGCTCTCTaGCAGGCAGGGCTGGATCTC +
Preference number: 4 (lower is better)
Translates to: ASFLRVLQQGQVNRAWARSSPAL*QAGLDL
Trigger: GAGATCCAGCCCTGCCTGGCAGAGAGCCGGGCTGCT...CCTGGCCCAGGCGCGGTTGACCTGCCCCTGCTGTAACACCCGCAAGAAGGATGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567365.2
CDS-3UTR GCA 90 bp ACGACCACCACGCTCTCCCCTTCAGGCCCAGTCCGGGATCCCTGCCGGCCGTTACCAGTCCGGGATCCCTaGCGGCCGTTAAGTCTGAGC +
Preference number: 4 (lower is better)
Translates to: TTTTLSPSGPVRDPCRPLPVRDP*RPLSLS
Trigger: GCTCAGACTTAACGGCCGGCAGGGATCCCGGACTGG...TAACGGCCGGCAGGGATCCCGGACTGGGCCTGAAGGGGAGAGCGTGGTGGTCGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324685.11
CDS-3UTR GCA 90 bp CCGCACCGGCTCTGGCGCCAGCCCCAGTCCTGCCTCGGTGAAGGATCCGCCCGGCCACGAGGAGAGTTTTaGCCCTCTGATAAGGAGACC +
Preference number: 4 (lower is better)
Translates to: PHRLWRQPQSCLGEGSARPRGEF*PSDKET
Trigger: GGTCTCCTTATCAGAGGGGCAAAACTCTCCTCGTGG...CCGGGCGGATCCTTCACCGAGGCAGGACTGGGGCTGGCGCCAGAGCCGGTGCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324685.11
CDS-3UTR CCA 90 bp AGCTCCAACCCTCTGGCCTCTCCGGGCACTGCCCTCACAGCCGATGGAGCATGGACCCTCCTCTTTCCCTaGGGCTGGGGCACTGACGCC +
Preference number: 4 (lower is better)
Translates to: SSNPLASPGTALTADGAWTLLFP*GWGTDA
Trigger: GGCGTCAGTGCCCCAGCCCCAGGGAAAGAGGAGGGT...CCATGCTCCATCGGCTGTGAGGGCAGTGCCCGGAGAGGCCAGAGGGTTGGAGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR CCA 90 bp CGCGACGACCACCACGCTCTCCCCTTCAGGCCCAGTCCGGGATCCCTGCCGGCCACCTCCTTCAGCCCTTaGCACAAGAGCCAGACCAAG +
Preference number: 4 (lower is better)
Translates to: RDDHHALPFRPSPGSLPATSFSP*HKSQTK
Trigger: CTTGGTCTGGCTCTTGTGCCAAGGGCTGAAGGAGGT...GGCCGGCAGGGATCCCGGACTGGGCCTGAAGGGGAGAGCGTGGTGGTCGTCGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324685.11
CDS-3UTR CCA 90 bp CTCCGGGCACTGCCCTCACAGCCGATGGAGCATGGCTGGGCAGGCAGACAGGACTGCCCTCACAGCCGATaGAGCATGGCTGGGCAGGCA +
Preference number: 4 (lower is better)
Translates to: LRALPSQPMEHGWAGRQDCPHSR*SMAGQA
Trigger: TGCCTGCCCAGCCATGCTCCATCGGCTGTGAGGGCA...GTCCTGTCTGCCTGCCCAGCCATGCTCCATCGGCTGTGAGGGCAGTGCCCGGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
ENST00000602784.1
CDS-3UTR TCA 90 bp AGCTCCAACCCTCTGGCCTCTCCGGGCACTGCCCTCACAGCCGATGGAGCATGGCGGCTGTACACTCGCTaGCAGAGTTCCTCCACCCGG +
Preference number: 4 (lower is better)
Translates to: SSNPLASPGTALTADGAWRLYTR*QSSSTR
Trigger: CCGGGTGGAGGAACTCTGTCAGCGAGTGTACAGCCG...CCATGCTCCATCGGCTGTGAGGGCAGTGCCCGGAGAGGCCAGAGGGTTGGAGCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR TCA 90 bp GTCCAGGGAACTCCACAGGACAGAAGCCCTGCCGAGGTTAGGGGGATGGTGGGTCCTGAGCCGCCTCACTaGGGGGCTCACTGTCCCCTC +
Preference number: 4 (lower is better)
Translates to: VQGTPQDRSPAEVRGMVGPEPPH*GAHCPL
Trigger: GAGGGGACAGTGAGCCCCTCAGTGAGGCGGCTCAGG...ACCCACCATCCCCCTAACCTCGGCAGGGCTTCTGTCCTGTGGAGTTCCCTGGAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR TCA 90 bp GTCCAGGGAACTCCACAGGACAGAAGCCCTGCCGAGGTTAGGGGGATGGTGGGTGGCGCATCTCACGGTTaGTGGGCCCCGCCTGCTCGT +
Preference number: 4 (lower is better)
Translates to: VQGTPQDRSPAEVRGMVGGASHG*WAPPAR
Trigger: ACGAGCAGGCGGGGCCCATCAACCGTGAGATGCGCC...ACCCACCATCCCCCTAACCTCGGCAGGGCTTCTGTCCTGTGGAGTTCCCTGGAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR TCA 90 bp GCCGAGGTTAGGGGGATGGTGGGTGAAGGAAAGTCTTCCTGGGGCCTGCAGCCCCTTGCGCCGCAGCCGTaGGATGTCCTCCTGAGCCCT +
Preference number: 4 (lower is better)
Translates to: AEVRGMVGEGKSSWGLQPLAPQP*DVLLSP
Trigger: AGGGCTCAGGAGGACATCTCACGGCTGCGGCGCAAG...GGGCTGCAGGCCCCAGGAAGACTTTCCTTCACCCACCATCCCCCTAACCTCGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR TCA 90 bp CCTTCTTGCGGGTGTTACAGCAGGGGCAGGTCAACCGCGCCTGGGCCAGGCAAAGCCCAGACCCCAAGCTaGCAGCAGGAGGAGTCCAGG +
Preference number: 4 (lower is better)
Translates to: PSCGCYSRGRSTAPGPGKAQTPS*QQEESR
Trigger: CCTGGACTCCTCCTGCTGTCAGCTTGGGGTCTGGGC...TTTGCCTGGCCCAGGCGCGGTTGACCTGCCCCTGCTGTAACACCCGCAAGAAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567365.2
CDS-3UTR GCA 90 bp CACGCCGCACCGCTCCCGAGGCCGATTGCAACGAGGGAAGTCACCCAGCTGAGGGCTGCTGGCACCCAGTaGCACCACAAAAGCCAAGGC +
Preference number: 4 (lower is better)
Translates to: HAAPLPRPIATREVTQLRAAGTQ*HHKSQG
Trigger: GCCTTGGCTTTTGTGGTGGCACTGGGTGCCAGCAGC...CCTCAGCTGGGTGACTTCCCTCGTTGCAATCGGCCTCGGGAGCGGTGCGGCGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324685.11
CDS-3UTR GCA 90 bp CTTGCGGGTGTTACAGCAGGGGCAGGTCAACCGCGCCTGGGCCAGGCAAAGGCAGCTCCAGGGCTTGGCTaGGCAGCGTCAGCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: LAGVTAGAGQPRLGQAKAAPGLG*AASAPS
Trigger: AGAAGGAGCTGACGCTGCGCAGCCAAGCCCTGGAGC...TGCCTTTGCCTGGCCCAGGCGCGGTTGACCTGCCCCTGCTGTAACACCCGCAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567365.2
CDS-3UTR CCA 90 bp AGTTCAGGCCGGCCTTTGGCCAGCGCAACCGGGAAACTAGCTCTCTCTCCGAGACATGGCCGCGGCGGCTaGAGCGATGCAGGGTCCCCT +
Preference number: 4 (lower is better)
Translates to: SSGRPLASATGKLALSPRHGRGG*SDAGSP
Trigger: AGGGGACCCTGCATCGCTCCAGCCGCCGCGGCCATG...TCTCGGAGAGAGAGCTAGTTTCCCGGTTGCGCTGGCCAAAGGCCGGCCTGAACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324685.11
CDS-3UTR CCA 90 bp GGGCGCCGCTCGGTACACGCCGCACCGCTCCCGAGGCCGATTGCAACGAGGGAAGGTCCATCTCCTCCGTaGAAGAGATGCCTCCAAGAC +
Preference number: 4 (lower is better)
Translates to: GRRSVHAAPLPRPIATREGPSPP*KRCLQD
Trigger: GTCTTGGAGGCATCTCTTCCACGGAGGAGATGGACC...TTCCCTCGTTGCAATCGGCCTCGGGAGCGGTGCGGCGTGTACCGAGCGGCGCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324685.11
CDS-3UTR CCA 90 bp CTGCAGCTCCAACCCTCTGGCCTCTCCGGGCACTGCCCTCACAGCCGATGGAGCTACTCCTTGCGTACCTaGGCCAGCGTGTCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: LQLQPSGLSGHCPHSRWSYSLRT*ASVSSS
Trigger: GCTGGAGGACACGCTGGCCCAGGTACGCAAGGAGTA...GCTCCATCGGCTGTGAGGGCAGTGCCCGGAGAGGCCAGAGGGTTGGAGCTGCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR CCA 90 bp CTCCGGGCACTGCCCTCACAGCCGATGGAGCATGGCTGGGCAGGCAGACAGGACCTCTTTCCCTGGGGCTaGGGCACTGACGCCAGAATC +
Preference number: 4 (lower is better)
Translates to: LRALPSQPMEHGWAGRQDLFPWG*GTDARI
Trigger: GATTCTGGCGTCAGTGCCCCAGCCCCAGGGAAAGAG...GTCCTGTCTGCCTGCCCAGCCATGCTCCATCGGCTGTGAGGGCAGTGCCCGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR CCA 90 bp GCATCCTTCTTGCGGGTGTTACAGCAGGGGCAGGTCAACCGCGCCTGGGCCAGGTTGAGCTCCAGGGCTTaGCTGCGCAGCGTCAGCTCC +
Preference number: 4 (lower is better)
Translates to: ASFLRVLQQGQVNRAWARLSSRA*LRSVSS
Trigger: GGAGCTGACGCTGCGCAGCCAAGCCCTGGAGCTCAA...CCTGGCCCAGGCGCGGTTGACCTGCCCCTGCTGTAACACCCGCAAGAAGGATGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567365.2
CDS-3UTR CCA 90 bp ACCAGGAACTACACTTCCCAGGATGCAGCCCGAGGAGTCCCGGCATCCCCCGGCAGGTCCTCGGCCAGCTaGGCGGCTTCTACAGCCTTC +
Preference number: 4 (lower is better)
Translates to: TRNYTSQDAARGVPASPGRSSAS*AASTAF
Trigger: GAAGGCTGTAGAAGCCGCCCAGCTGGCCGAGGACCT...GCCGGGGGATGCCGGGACTCCTCGGGCTGCATCCTGGGAAGTGTAGTTCCTGGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324685.11
CDS-3UTR CCA 90 bp CCTTCTTGCGGGTGTTACAGCAGGGGCAGGTCAACCGCGCCTGGGCCAGGCAAATCTGCCAGGCAGGGCTaGATCTCCCGCAGCCGAGTC +
Preference number: 4 (lower is better)
Translates to: PSCGCYSRGRSTAPGPGKSARQG*ISRSRV
Trigger: GACTCGGCTGCGGGAGATCCAGCCCTGCCTGGCAGA...TTTGCCTGGCCCAGGCGCGGTTGACCTGCCCCTGCTGTAACACCCGCAAGAAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567365.2
CDS-3UTR CCA 90 bp ACGACCACCACGCTCTCCCCTTCAGGCCCAGTCCGGGATCCCTGCCGGCCGTTAACAGCCGATGGAGCATaGCTGGGCAGGCAGACAGGA +
Preference number: 4 (lower is better)
Translates to: TTTTLSPSGPVRDPCRPLTADGA*LGRQTG
Trigger: TCCTGTCTGCCTGCCCAGCCATGCTCCATCGGCTGT...TAACGGCCGGCAGGGATCCCGGACTGGGCCTGAAGGGGAGAGCGTGGTGGTCGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324685.11
CDS-3UTR CCA 90 bp CTGAGAAGCGGTCCGCAGGATCCAGTTCAGGCCGGCCTTTGGCCAGCGCAACCGTGCCCTCACAGCCGATaGAGCATGGCTGGGCAGGCA +
Preference number: 4 (lower is better)
Translates to: LRSGPQDPVQAGLWPAQPCPHSR*SMAGQA
Trigger: TGCCTGCCCAGCCATGCTCCATCGGCTGTGAGGGCA...CGGTTGCGCTGGCCAAAGGCCGGCCTGAACTGGATCCTGCGGACCGCTTCTCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324685.11
CDS-3UTR CCA 90 bp AGCTCCAACCCTCTGGCCTCTCCGGGCACTGCCCTCACAGCCGATGGAGCATGGTGCCCTCACAGCCGATaGAGCATGGCTGGGCAGGCA +
Preference number: 4 (lower is better)
Translates to: SSNPLASPGTALTADGAWCPHSR*SMAGQA
Trigger: TGCCTGCCCAGCCATGCTCCATCGGCTGTGAGGGCA...CCATGCTCCATCGGCTGTGAGGGCAGTGCCCGGAGAGGCCAGAGGGTTGGAGCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
ENST00000602784.1
CDS-3UTR CCA 90 bp GCCGAGGTTAGGGGGATGGTGGGTGAAGGAAAGTCTTCCTGGGGCCTGCAGCCCGCGCTTACGGAGGCCTaGCTGACCTCCACCCGTGAC +
Preference number: 4 (lower is better)
Translates to: AEVRGMVGEGKSSWGLQPALTEA*LTSTRD
Trigger: GTCACGGGTGGAGGTCAGCCAGGCCTCCGTAAGCGC...GGGCTGCAGGCCCCAGGAAGACTTTCCTTCACCCACCATCCCCCTAACCTCGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324685.11
CDS-3UTR CCA 90 bp GCATCCTTCTTGCGGGTGTTACAGCAGGGGCAGGTCAACCGCGCCTGGGCCAGGCAGGTCAACCGCGCCTaGGCCAGGCAAAGGCATCAG +
Preference number: 4 (lower is better)
Translates to: ASFLRVLQQGQVNRAWARQVNRA*ARQRHQ
Trigger: CTGATGCCTTTGCCTGGCCCAGGCGCGGTTGACCTG...CCTGGCCCAGGCGCGGTTGACCTGCCCCTGCTGTAACACCCGCAAGAAGGATGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567365.2
CDS-3UTR TCA 90 bp CTCTGGCGCCAGCCCCAGTCCTGCCTCGGTGAAGGATCCGCCCGGGGCGCCTGCATGTCCTCAAAAGCCTaGCCTGTCACATCCATCTCT +
Preference number: 4 (lower is better)
Translates to: LWRQPQSCLGEGSARGACMSSKA*PVTSIS
Trigger: AGAGATGGATGTGACAGGTCAGGCTTTTGAGGACAT...GCAGGCGCCCCGGGCGGATCCTTCACCGAGGCAGGACTGGGGCTGGCGCCAGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000324685.11
CDS-3UTR TCA 90 bp ATCCTTCTTGCGGGTGTTACAGCAGGGGCAGGTCAACCGCGCCTGGGCCAGGCACATCCACCTGGGACTTaGGGCCAAGGACCTGCTCGC +
Preference number: 4 (lower is better)
Translates to: ILLAGVTAGAGQPRLGQAHPPGT*GQGPAR
Trigger: GCGAGCAGGTCCTTGGCCTCAAGTCCCAGGTGGATG...TGCCTGGCCCAGGCGCGGTTGACCTGCCCCTGCTGTAACACCCGCAAGAAGGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567365.2
CDS-3UTR TCA 90 bp CTTCTTGCGGGTGTTACAGCAGGGGCAGGTCAACCGCGCCTGGGCCAGGCAAAGCAGCCTTCCGCTTGTTaGGCTCCAGGGCTTGGCTGC +
Preference number: 4 (lower is better)
Translates to: LLAGVTAGAGQPRLGQAKQPSAC*APGLGC
Trigger: GCAGCCAAGCCCTGGAGCTCAACAAGCGGAAGGCTG...CTTTGCCTGGCCCAGGCGCGGTTGACCTGCCCCTGCTGTAACACCCGCAAGAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567365.2
CDS-3UTR GCA 90 bp AGGATGCAGCCCGAGGAGTCCCGGCATCCCCCGGCCATGACAGCCAAGGACGTGAACTCCATTCGGCCTTaGAGCTCCAGCTCCACCTCC +
Preference number: 4 (lower is better)
Translates to: RMQPEESRHPPAMTAKDVNSIRP*SSSSTS
Trigger: GGAGGTGGAGCTGGAGCTGCAAGGCCGAATGGAGTT...CACGTCCTTGGCTGTCATGGCCGGGGGATGCCGGGACTCCTCGGGCTGCATCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324685.11
CDS-3UTR GCA 90 bp GCCGAGGTTAGGGGGATGGTGGGTGAAGGAAAGTCTTCCTGGGGCCTGCAGCCCCAGCTCTCGGGTGTGTaGCTGAGCCGCCTCACTGAG +
Preference number: 4 (lower is better)
Translates to: AEVRGMVGEGKSSWGLQPQLSGV*LSRLTE
Trigger: CTCAGTGAGGCGGCTCAGGCACACACCCGAGAGCTG...GGGCTGCAGGCCCCAGGAAGACTTTCCTTCACCCACCATCCCCCTAACCTCGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR GCA 90 bp CCTTCAGGCCCAGTCCGGGATCCCTGCCGGCCGTTAAGTCTGAGCCCTCCCAGGAGTGAGAATTGGGCCTaGAGCATGCGGTACTCCCCC +
Preference number: 4 (lower is better)
Translates to: PSGPVRDPCRPLSLSPPRSENWA*SMRYSP
Trigger: GGGGGAGTACCGCATGCTGCAGGCCCAATTCTCACT...CCTGGGAGGGCTCAGACTTAACGGCCGGCAGGGATCCCGGACTGGGCCTGAAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324685.11
CDS-3UTR GCA 90 bp GCCCGAGGTCACCGTGGCGGCCCGCGTCTCCTTCTCCAGTTCGTCCTGGTCCAGTTGGCCGCCAGATTCTaGTCAAACTCGATGCGCAGC +
Preference number: 4 (lower is better)
Translates to: ARGHRGGPRLLLQFVLVQLAARF*SNSMRS
Trigger: GCTGCGCATCGAGTTTGAGCAGAATCTGGCGGCCAA...CTGGACCAGGACGAACTGGAGAAGGAGACGCGGGCCGCCACGGTGACCTCGGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324685.11
CDS-3UTR GCA 90 bp AGCTCCAACCCTCTGGCCTCTCCGGGCACTGCCCTCACAGCCGATGGAGCATGGTCCGCTGCCATGAGCTaGACCTTATCCCGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: SSNPLASPGTALTADGAWSAAMS*TLSRCS
Trigger: GGAGCAGCGGGATAAGGTGCAGCTCATGGCAGCGGA...CCATGCTCCATCGGCTGTGAGGGCAGTGCCCGGAGAGGCCAGAGGGTTGGAGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR GCA 90 bp ACGCACGCGGCCCCTGCCGTGGCCATAGCACTGTCGCCAGCGCCTGAACCAACATCCTTTTCCCGCAACTaGTGTAGCAGCCGCCCGTTC +
Preference number: 4 (lower is better)
Translates to: THAAPAVAIALSPAPEPTSFSRN*CSSRPF
Trigger: GAACGGGCGGCTGCTACAGCAGTTGCGGGAAAAGGA...TGTTGGTTCAGGCGCTGGCGACAGTGCTATGGCCACGGCAGGGGCCGCGTGCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324685.11
CDS-3UTR GCA 90 bp GCCCGAGGTCACCGTGGCGGCCCGCGTCTCCTTCTCCAGTTCGTCCTGGTCCAGTTGAGGCCAAGGACCTaGTCGCCCAACTCATCCTTC +
Preference number: 4 (lower is better)
Translates to: ARGHRGGPRLLLQFVLVQLRPRT*SPNSSF
Trigger: GAAGGATGAGTTGGGCGAGCAGGTCCTTGGCCTCAA...CTGGACCAGGACGAACTGGAGAAGGAGACGCGGGCCGCCACGGTGACCTCGGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324685.11
CDS-3UTR GCA 90 bp AGTTCAGGCCGGCCTTTGGCCAGCGCAACCGGGAAACTAGCTCTCTCTCCGAGACCCCCGAGGCTGCCCTaGAAGGCTCGCTCCTTCTCC +
Preference number: 4 (lower is better)
Translates to: SSGRPLASATGKLALSPRPPRLP*KARSFS
Trigger: GGAGAAGGAGCGAGCCTTGCAGGGCAGCCTCGGGGG...TCTCGGAGAGAGAGCTAGTTTCCCGGTTGCGCTGGCCAAAGGCCGGCCTGAACT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324685.11
CDS-3UTR GCA 90 bp CCCCCATCTGCCAAGAGGGTACCTCCTTCAGCCCTTGGCACAAGAGCCAGACCACCACACCCCCGAGGCTaGCCTGCAAGGCTCGCTCCT +
Preference number: 4 (lower is better)
Translates to: PPSAKRVPPSALGTRARPPHPRG*PARLAP
Trigger: AGGAGCGAGCCTTGCAGGGCAGCCTCGGGGGTGTGG...TGGTCTGGCTCTTGTGCCAAGGGCTGAAGGAGGTACCCTCTTGGCAGATGGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR GCA 90 bp TCTTGCGGGTGTTACAGCAGGGGCAGGTCAACCGCGCCTGGGCCAGGCAAAGGCAGCCGAGTCTGCACGTaGTCCAGCTGCACCTTCAGG +
Preference number: 4 (lower is better)
Translates to: SCGCYSRGRSTAPGPGKGSRVCT*SSCTFR
Trigger: CCTGAAGGTGCAGCTGGAGCACGTGCAGACTCGGCT...GCCTTTGCCTGGCCCAGGCGCGGTTGACCTGCCCCTGCTGTAACACCCGCAAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567365.2
CDS-3UTR GCA 90 bp CACGCCGCACCGCTCCCGAGGCCGATTGCAACGAGGGAAGTCACCCAGCTGAGGCACCAAAGGCCGCGTTaGACTTGGGGCACTTCCTCT +
Preference number: 4 (lower is better)
Translates to: HAAPLPRPIATREVTQLRHQRPR*TWGTSS
Trigger: AGAGGAAGTGCCCCAAGTGCAACGCGGCCTTTGGTG...CCTCAGCTGGGTGACTTCCCTCGTTGCAATCGGCCTCGGGAGCGGTGCGGCGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324685.11
CDS-3UTR GCA 90 bp ACGCACGCGGCCCCTGCCGTGGCCATAGCACTGTCGCCAGCGCCTGAACCAACAGCTTGGCTGATCCCATaGCCACTAGCATGCACCAGG +
Preference number: 4 (lower is better)
Translates to: THAAPAVAIALSPAPEPTAWLIP*PLACTR
Trigger: CCTGGTGCATGCTAGTGGGCATGGGATCAGCCAAGC...TGTTGGTTCAGGCGCTGGCGACAGTGCTATGGCCACGGCAGGGGCCGCGTGCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324685.11
CDS-3UTR CCA 90 bp ACCAGGAACTACACTTCCCAGGATGCAGCCCGAGGAGTCCCGGCATCCCCCGGCAGTCCCATCACATGTTaGCCCCTCCTGGGTCCCAGG +
Preference number: 4 (lower is better)
Translates to: TRNYTSQDAARGVPASPGSPITC*PLLGPR
Trigger: CCTGGGACCCAGGAGGGGCCAACATGTGATGGGACT...GCCGGGGGATGCCGGGACTCCTCGGGCTGCATCCTGGGAAGTGTAGTTCCTGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324685.11
CDS-3UTR CCA 90 bp CCCCCATCTGCCAAGAGGGTACCTCCTTCAGCCCTTGGCACAAGAGCCAGACCAAGTGGGCAGAGCCACTaGCCTGGGCCCGGAGCTTGC +
Preference number: 4 (lower is better)
Translates to: PPSAKRVPPSALGTRARPSGQSH*PGPGAC
Trigger: GCAAGCTCCGGGCCCAGGCCAGTGGCTCTGCCCACT...TGGTCTGGCTCTTGTGCCAAGGGCTGAAGGAGGTACCCTCTTGGCAGATGGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR CCA 90 bp CTTGCGGGTGTTACAGCAGGGGCAGGTCAACCGCGCCTGGGCCAGGCAAAGGCAAGCTGGGCATCCACCTaGGACTTGAGGCCAAGGACC +
Preference number: 4 (lower is better)
Translates to: LAGVTAGAGQPRLGQAKASWAST*DLRPRT
Trigger: GGTCCTTGGCCTCAAGTCCCAGGTGGATGCCCAGCT...TGCCTTTGCCTGGCCCAGGCGCGGTTGACCTGCCCCTGCTGTAACACCCGCAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567365.2
CDS-3UTR CCA 90 bp CTGCAGCTCCAACCCTCTGGCCTCTCCGGGCACTGCCCTCACAGCCGATGGAGCTGCACAGTCAGCAGCTaGGCATCCACCTGGGACTTG +
Preference number: 4 (lower is better)
Translates to: LQLQPSGLSGHCPHSRWSCTVSS*ASTWDL
Trigger: CAAGTCCCAGGTGGATGCCCAGCTGCTGACTGTGCA...GCTCCATCGGCTGTGAGGGCAGTGCCCGGAGAGGCCAGAGGGTTGGAGCTGCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR CCA 90 bp CCTTCTTGCGGGTGTTACAGCAGGGGCAGGTCAACCGCGCCTGGGCCAGGCAAAAGGTCCTCGGCCAGCTaGGCGGCTTCTACAGCCTTC +
Preference number: 4 (lower is better)
Translates to: PSCGCYSRGRSTAPGPGKRSSAS*AASTAF
Trigger: GAAGGCTGTAGAAGCCGCCCAGCTGGCCGAGGACCT...TTTGCCTGGCCCAGGCGCGGTTGACCTGCCCCTGCTGTAACACCCGCAAGAAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567365.2
3UTR CAA 72 bp GAGAAGCGGTCCGCAGGATCCAGTTCAGGCCGGCCTTaGGCCAGCGCAACCGGGAAACTAGCTCTCTCTCCG +
Preference number: 4 (lower is better)
Translates to: EKRSAGSSSGRP*ASATGKLALSP
Trigger: CGGAGAGAGAGCTAGTTTCCCGGTTGCGCTGGCCAAAGGCCGGCCTGAACTGGATCCTGCGGACCGCTTCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324685.11
CDS-3UTR TCA 90 bp GGGTACCTCCTTCAGCCCTTGGCACAAGAGCCAGACCAAGGTGTCCAGGGAACTTCTCGGGTGTGTGCCTaGGCCGCCTCACTGAGGGGC +
Preference number: 4 (lower is better)
Translates to: GYLLQPLAQEPDQGVQGTSRVCA*AASLRG
Trigger: GCCCCTCAGTGAGGCGGCTCAGGCACACACCCGAGA...AGTTCCCTGGACACCTTGGTCTGGCTCTTGTGCCAAGGGCTGAAGGAGGTACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR TCA 90 bp CTGCAGCTCCAACCCTCTGGCCTCTCCGGGCACTGCCCTCACAGCCGATGGAGCTGTTTCTCCTGCAGCTaGGTGGCCAAGTCCTGCAGT +
Preference number: 4 (lower is better)
Translates to: LQLQPSGLSGHCPHSRWSCFSCS*VAKSCS
Trigger: ACTGCAGGACTTGGCCACTCAGCTGCAGGAGAAACA...GCTCCATCGGCTGTGAGGGCAGTGCCCGGAGAGGCCAGAGGGTTGGAGCTGCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR TCA 90 bp GTCCAGGGAACTCCACAGGACAGAAGCCCTGCCGAGGTTAGGGGGATGGTGGGTCTCCCGATCAGCCCTTaGGAGAGCGGAGGCTACAGG +
Preference number: 4 (lower is better)
Translates to: VQGTPQDRSPAEVRGMVGLPISP*ESGGYR
Trigger: CCTGTAGCCTCCGCTCTCTCAAGGGCTGATCGGGAG...ACCCACCATCCCCCTAACCTCGGCAGGGCTTCTGTCCTGTGGAGTTCCCTGGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR TCA 90 bp CCTTCAGGCCCAGTCCGGGATCCCTGCCGGCCGTTAAGTCTGAGCCCTCCCAGGCTGCTCGGAGACCCTTaGGGAGTTCTGATTCCTTCC +
Preference number: 4 (lower is better)
Translates to: PSGPVRDPCRPLSLSPPRLLGDP*GVLIPS
Trigger: GGAAGGAATCAGAACTCCTCAAGGGTCTCCGAGCAG...CCTGGGAGGGCTCAGACTTAACGGCCGGCAGGGATCCCGGACTGGGCCTGAAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324685.11
CDS-3UTR TCA 90 bp CCGCTCGGTACACGCCGCACCGCTCCCGAGGCCGATTGCAACGAGGGAAGTCACCCCAAAGGAAGCAAGTaGTGCCCCCATCTGCCAAGA +
Preference number: 4 (lower is better)
Translates to: PLGTRRTAPEADCNEGSHPKGSK*CPHLPR
Trigger: TCTTGGCAGATGGGGGCATCACTTGCTTCCTTTGGG...GTGACTTCCCTCGTTGCAATCGGCCTCGGGAGCGGTGCGGCGTGTACCGAGCGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324685.11
CDS-3UTR TCA 90 bp ACCGCTCCGCACCGGCTCTGGCGCCAGCCCCAGTCCTGCCTCGGTGAAGGATCCGTGGCCGCGTCTCTATaGTGCAATATCCTGCGTTTT +
Preference number: 4 (lower is better)
Translates to: TAPHRLWRQPQSCLGEGSVAASL*CNILRF
Trigger: AAAACGCAGGATATTGCATCATAGAGACGCGGCCAC...GGATCCTTCACCGAGGCAGGACTGGGGCTGGCGCCAGAGCCGGTGCGGAGCGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324685.11
CDS-3UTR GCA 90 bp CCGCTCGGTACACGCCGCACCGCTCCCGAGGCCGATTGCAACGAGGGAAGTCACCCTCCGTGGAAGAGATaGCTCCAAGACGAATGGGCT +
Preference number: 4 (lower is better)
Translates to: PLGTRRTAPEADCNEGSHPPWKR*LQDEWA
Trigger: AGCCCATTCGTCTTGGAGGCATCTCTTCCACGGAGG...GTGACTTCCCTCGTTGCAATCGGCCTCGGGAGCGGTGCGGCGTGTACCGAGCGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324685.11
CDS-3UTR GCA 90 bp GGGCGCCGCTCGGTACACGCCGCACCGCTCCCGAGGCCGATTGCAACGAGGGAATTCTCGATGTCCCACTaGAAGTCCTCCACTGTTGTC +
Preference number: 4 (lower is better)
Translates to: GRRSVHAAPLPRPIATREFSMSH*KSSTVV
Trigger: GACAACAGTGGAGGACTTGCAGTGGGACATCGAGAA...TTCCCTCGTTGCAATCGGCCTCGGGAGCGGTGCGGCGTGTACCGAGCGGCGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324685.11
CDS-3UTR GCA 90 bp CCTTCAGGCCCAGTCCGGGATCCCTGCCGGCCGTTAAGTCTGAGCCCTCCCAGGAGCCTTGCGTTCCGCTaGCATGAGCTGCACCTTATC +
Preference number: 4 (lower is better)
Translates to: PSGPVRDPCRPLSLSPPRSLAFR*HELHLI
Trigger: GATAAGGTGCAGCTCATGGCAGCGGAACGCAAGGCT...CCTGGGAGGGCTCAGACTTAACGGCCGGCAGGGATCCCGGACTGGGCCTGAAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324685.11
CDS-3UTR GCA 90 bp ACGCACGCGGCCCCTGCCGTGGCCATAGCACTGTCGCCAGCGCCTGAACCAACATGGTGGCACCCAGCTTaGGCTGCAGGTGTTCTATCT +
Preference number: 4 (lower is better)
Translates to: THAAPAVAIALSPAPEPTWWHPA*AAGVLS
Trigger: AGATAGAACACCTGCAGCGCAAGCTGGGTGCCACCA...TGTTGGTTCAGGCGCTGGCGACAGTGCTATGGCCACGGCAGGGGCCGCGTGCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324685.11
CDS-3UTR GCA 90 bp CCTCCTTCAGCCCTTGGCACAAGAGCCAGACCAAGGTGTCCAGGGAACTCCACACCCCCGAGGCTGCCCTaGAAGGCTCGCTCCTTCTCC +
Preference number: 4 (lower is better)
Translates to: PPSALGTRARPRCPGNSTPPRLP*KARSFS
Trigger: GGAGAAGGAGCGAGCCTTGCAGGGCAGCCTCGGGGG...TGTGGAGTTCCCTGGACACCTTGGTCTGGCTCTTGTGCCAAGGGCTGAAGGAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR GCA 90 bp GAACGAAGCTTGGCTGATCCCATGCCCACTAGCATGCACCAGGGTCCCCAAACCCCACACCCCCGAGGCTaGCCTGCAAGGCTCGCTCCT +
Preference number: 4 (lower is better)
Translates to: ERSLADPMPTSMHQGPQTPHPRG*PARLAP
Trigger: AGGAGCGAGCCTTGCAGGGCAGCCTCGGGGGTGTGG...GGTTTGGGGACCCTGGTGCATGCTAGTGGGCATGGGATCAGCCAAGCTTCGTTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR GCA 90 bp AGCTCCAACCCTCTGGCCTCTCCGGGCACTGCCCTCACAGCCGATGGAGCATGGACCTCCACCTTCCTCTaGTTTTCCAGCTTGCGCCGC +
Preference number: 4 (lower is better)
Translates to: SSNPLASPGTALTADGAWTSTFL*FSSLRR
Trigger: GCGGCGCAAGCTGGAAAAGCAGAGGAAGGTGGAGGT...CCATGCTCCATCGGCTGTGAGGGCAGTGCCCGGAGAGGCCAGAGGGTTGGAGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR GCA 90 bp CGGACCAGGAACTACACTTCCCAGGATGCAGCCCGAGGAGTCCCGGCATCCCCCGGAAGCTCAGTCAAGTaGTCTGGGCTCCTCAGGCCT +
Preference number: 4 (lower is better)
Translates to: RTRNYTSQDAARGVPASPGSSVK*SGLLRP
Trigger: AGGCCTGAGGAGCCCAGAGCACTTGACTGAGCTTCC...GGGGGATGCCGGGACTCCTCGGGCTGCATCCTGGGAAGTGTAGTTCCTGGTCCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324685.11
CDS-3UTR CCA 90 bp TCCCTTCCCCTCCTGGGAAGTTCCACCTCCACTGTAGTTAAGGCCACCAGGATGTGCCTGGCCCAGACATaGCCGCGGCGGCTGGAGCGA +
Preference number: 4 (lower is better)
Translates to: SLPLLGSSTSTVVKATRMCLAQT*PRRLER
Trigger: TCGCTCCAGCCGCCGCGGCCATGTCTGGGCCAGGCA...CATCCTGGTGGCCTTAACTACAGTGGAGGTGGAACTTCCCAGGAGGGGAAGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR CCA 90 bp AAGAGGGTACCTCCTTCAGCCCTTGGCACAAGAGCCAGACCAAGGTGTCCAGGGGGCGCGTTTGTTGCCTaGCCCAGACATGGCCGCGGC +
Preference number: 4 (lower is better)
Translates to: KRVPPSALGTRARPRCPGGAFVA*PRHGRG
Trigger: GCCGCGGCCATGTCTGGGCCAGGCAACAAACGCGCC...CCCTGGACACCTTGGTCTGGCTCTTGTGCCAAGGGCTGAAGGAGGTACCCTCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR CCA 90 bp CTGCAGCTCCAACCCTCTGGCCTCTCCGGGCACTGCCCTCACAGCCGATGGAGCTTCCGCTTGTATCGCTaGGCGTCCCCTTTTAGCTGG +
Preference number: 4 (lower is better)
Translates to: LQLQPSGLSGHCPHSRWSFRLYR*ASPFSW
Trigger: CCAGCTAAAAGGGGACGCCCAGCGATACAAGCGGAA...GCTCCATCGGCTGTGAGGGCAGTGCCCGGAGAGGCCAGAGGGTTGGAGCTGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR CCA 90 bp GCATCCACGGAGACAGACAGGTTAGGGCCAGTTTCCGGGAAGCTCAGTCAAGTGGCTCCCGCTTGGGCCTaGCCTCAGGTTCTCGGCCCC +
Preference number: 4 (lower is better)
Translates to: ASTETDRLGPVSGKLSQVAPAWA*PQVLGP
Trigger: GGGGCCGAGAACCTGAGGCCAGGCCCAAGCGGGAGC...CACTTGACTGAGCTTCCCGGAAACTGGCCCTAACCTGTCTGTCTCCGTGGATGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR CCA 90 bp CAAGGACATGGCTCACTGGTCCTCATTTGTGAGCCAGTAGGCAGGGAGCGAGCCCCCAGCGGCTGGGGCTaGTCTGTCCCTTCCCCTCCT +
Preference number: 4 (lower is better)
Translates to: QGHGSLVLICEPVGRERAPSGWG*SVPSPP
Trigger: AGGAGGGGAAGGGACAGACCAGCCCCAGCCGCTGGG...GGCTCGCTCCCTGCCTACTGGCTCACAAATGAGGACCAGTGAGCCATGTCCTTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
ENST00000602784.1
CDS-3UTR CCA 90 bp CCCCCATCTGCCAAGAGGGTACCTCCTTCAGCCCTTGGCACAAGAGCCAGACCAAGTTGGCCCAGCGGCTaGGGCTGGTCTGTCCCTTCC +
Preference number: 4 (lower is better)
Translates to: PPSAKRVPPSALGTRARPSWPSG*GWSVPS
Trigger: GGAAGGGACAGACCAGCCCCAGCCGCTGGGCCAACT...TGGTCTGGCTCTTGTGCCAAGGGCTGAAGGAGGTACCCTCTTGGCAGATGGGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
ENST00000602784.1
CDS-3UTR CCA 90 bp ACCGCTCCGCACCGGCTCTGGCGCCAGCCCCAGTCCTGCCTCGGTGAAGGATCCGATAAGGAGACCGGGTaGCCTTTAGCGCAGATATCT +
Preference number: 4 (lower is better)
Translates to: TAPHRLWRQPQSCLGEGSDKETG*PLAQIS
Trigger: AGATATCTGCGCTAAAGGCCACCCGGTCTCCTTATC...GGATCCTTCACCGAGGCAGGACTGGGGCTGGCGCCAGAGCCGGTGCGGAGCGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324685.11
CDS-3UTR TCA 90 bp TACCTCCTTCAGCCCTTGGCACAAGAGCCAGACCAAGGTGTCCAGGGAACTCCACGATGCAGGGTCCCCTaGGGGGCGTCAAACGGGAGG +
Preference number: 4 (lower is better)
Translates to: YLLQPLAQEPDQGVQGTPRCRVP*GASNGR
Trigger: CCTCCCGTTTGACGCCCCTCAGGGGACCCTGCATCG...TGGAGTTCCCTGGACACCTTGGTCTGGCTCTTGTGCCAAGGGCTGAAGGAGGTA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR TCA 90 bp GCAGGCAGACAGGACACAGGCTCAGTCACAGGGTGTCAGGGGGAAGCTCTTCTAAGGTGCCTCAGGCGCTaGAGACAGCTCCCCCTGGCT +
Preference number: 4 (lower is better)
Translates to: AGRQDTGSVTGCQGEALLRCLRR*RQLPLA
Trigger: AGCCAGGGGGAGCTGTCTTCAGCGCCTGAGGCACCT...TAGAAGAGCTTCCCCCTGACACCCTGTGACTGAGCCTGTGTCCTGTCTGCCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR TCA 90 bp CAAGGACATGGCTCACTGGTCCTCATTTGTGAGCCAGTAGGCAGGGAGCGAGCCGGGGTCTCTCAGCTCTaGTGTCCCCGGCTCTGGGAG +
Preference number: 4 (lower is better)
Translates to: QGHGSLVLICEPVGRERAGVSQL*CPRLWE
Trigger: CTCCCAGAGCCGGGGACATCAGAGCTGAGAGACCCC...GGCTCGCTCCCTGCCTACTGGCTCACAAATGAGGACCAGTGAGCCATGTCCTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR TCA 90 bp GACAGACAGGTTAGGGCCAGTTTCCGGGAAGCTCAGTCAAGTGCTCTGGGCTCCGGGGTCTCTCAGCTCTaGTGTCCCCGGCTCTGGGAG +
Preference number: 4 (lower is better)
Translates to: DRQVRASFREAQSSALGSGVSQL*CPRLWE
Trigger: CTCCCAGAGCCGGGGACATCAGAGCTGAGAGACCCC...GGAGCCCAGAGCACTTGACTGAGCTTCCCGGAAACTGGCCCTAACCTGTCTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR TCA 90 bp ACAAGCATCTCTAGAACAGAGGCTGTGGGTCCAAACGGGTCCCTGCAGCTCCAACCAAGGCCGGCTCACTaGGAGGGGGCCGCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: TSISRTEAVGPNGSLQLQPRPAH*EGAAAA
Trigger: TGCAGCTGCGGCCCCCTCTCAGTGAGCCGGCCTTGG...TTGGAGCTGCAGGGACCCGTTTGGACCCACAGCCTCTGTTCTAGAGATGCTTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR TCA 90 bp CTGCAGCTCCAACCCTCTGGCCTCTCCGGGCACTGCCCTCACAGCCGATGGAGCTGTCCTCCAGCTGAATaGCCTCTGTGCGTAGCTTCT +
Preference number: 4 (lower is better)
Translates to: LQLQPSGLSGHCPHSRWSCPPAE*PLCVAS
Trigger: AGAAGCTACGCACAGAGGTCATTCAGCTGGAGGACA...GCTCCATCGGCTGTGAGGGCAGTGCCCGGAGAGGCCAGAGGGTTGGAGCTGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR TCA 90 bp AAGAGGGTACCTCCTTCAGCCCTTGGCACAAGAGCCAGACCAAGGTGTCCAGGGCTGGGGCTGGGGCACTaGCGCCAGAATCCTCTGGGT +
Preference number: 4 (lower is better)
Translates to: KRVPPSALGTRARPRCPGLGLGH*RQNPLG
Trigger: ACCCAGAGGATTCTGGCGTCAGTGCCCCAGCCCCAG...CCCTGGACACCTTGGTCTGGCTCTTGTGCCAAGGGCTGAAGGAGGTACCCTCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR TCA 90 bp AGCTCCAACCCTCTGGCCTCTCCGGGCACTGCCCTCACAGCCGATGGAGCATGGTCCCGCAGCAGCTTGTaGATCTGGTTGGCCTTGATC +
Preference number: 4 (lower is better)
Translates to: SSNPLASPGTALTADGAWSRSSL*IWLALI
Trigger: GATCAAGGCCAACCAGATTCACAAGCTGCTGCGGGA...CCATGCTCCATCGGCTGTGAGGGCAGTGCCCGGAGAGGCCAGAGGGTTGGAGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR TCA 90 bp ATCCTTCTTGCGGGTGTTACAGCAGGGGCAGGTCAACCGCGCCTGGGCCAGGCAGCTTGGGAACAACTCTaGCAGTGCCCAGACCCCAAG +
Preference number: 4 (lower is better)
Translates to: ILLAGVTAGAGQPRLGQAAWEQL*QCPDPK
Trigger: CTTGGGGTCTGGGCACTGTCAGAGTTGTTCCCAAGC...TGCCTGGCCCAGGCGCGGTTGACCTGCCCCTGCTGTAACACCCGCAAGAAGGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567365.2
CDS-3UTR GCA 90 bp CACGCCGCACCGCTCCCGAGGCCGATTGCAACGAGGGAAGTCACCCAGCTGAGGTCATCTTCACAAGCCTaGCGTTGTTCCAGCCGCTCT +
Preference number: 4 (lower is better)
Translates to: HAAPLPRPIATREVTQLRSSSQA*RCSSRS
Trigger: AGAGCGGCTGGAACAACGGCAGGCTTGTGAAGATGA...CCTCAGCTGGGTGACTTCCCTCGTTGCAATCGGCCTCGGGAGCGGTGCGGCGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324685.11
CDS-3UTR GCA 90 bp CTGCAGCTCCAACCCTCTGGCCTCTCCGGGCACTGCCCTCACAGCCGATGGAGCGCATCATCTGTGGCCTaGCGCTTCTCCAACTTCTCA +
Preference number: 4 (lower is better)
Translates to: LQLQPSGLSGHCPHSRWSASSVA*RFSNFS
Trigger: TGAGAAGTTGGAGAAGCGGCAGGCCACAGATGATGC...GCTCCATCGGCTGTGAGGGCAGTGCCCGGAGAGGCCAGAGGGTTGGAGCTGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR GCA 90 bp ACGCACGCGGCCCCTGCCGTGGCCATAGCACTGTCGCCAGCGCCTGAACCAACACACACGAGACACAGCTaGCTTGGAGAACTCCATTCG +
Preference number: 4 (lower is better)
Translates to: THAAPAVAIALSPAPEPTHTRHS*LGELHS
Trigger: CGAATGGAGTTCTCCAAGGCAGCTGTGTCTCGTGTG...TGTTGGTTCAGGCGCTGGCGACAGTGCTATGGCCACGGCAGGGGCCGCGTGCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324685.11
CDS-3UTR GCA 90 bp GCCGCACCGCTCCCGAGGCCGATTGCAACGAGGGAAGTCACCCAGCTGAGGTGTCCTGGGCCCGGAGCTTaGCAATCTCAGCTTGTACTT +
Preference number: 4 (lower is better)
Translates to: AAPLPRPIATREVTQLRCPGPGA*QSQLVL
Trigger: AAGTACAAGCTGAGATTGGCAAGCTCCGGGCCCAGG...ACACCTCAGCTGGGTGACTTCCCTCGTTGCAATCGGCCTCGGGAGCGGTGCGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324685.11
CDS-3UTR GCA 90 bp GGGTACCTCCTTCAGCCCTTGGCACAAGAGCCAGACCAAGGTGTCCAGGGAACTAGCAGCCCGGCTCTCTaGCAGGCAGGGCTGGATCTC +
Preference number: 4 (lower is better)
Translates to: GYLLQPLAQEPDQGVQGTSSPAL*QAGLDL
Trigger: GAGATCCAGCCCTGCCTGGCAGAGAGCCGGGCTGCT...AGTTCCCTGGACACCTTGGTCTGGCTCTTGTGCCAAGGGCTGAAGGAGGTACCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR GCA 90 bp GCCAAGAGGGTACCTCCTTCAGCCCTTGGCACAAGAGCCAGACCAAGGTGTCCAAGCAGCCCGGCTCTCTaGCAGGCAGGGCTGGATCTC +
Preference number: 4 (lower is better)
Translates to: AKRVPPSALGTRARPRCPSSPAL*QAGLDL
Trigger: GAGATCCAGCCCTGCCTGGCAGAGAGCCGGGCTGCT...TGGACACCTTGGTCTGGCTCTTGTGCCAAGGGCTGAAGGAGGTACCCTCTTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR GCA 90 bp CTTGCGGGTGTTACAGCAGGGGCAGGTCAACCGCGCCTGGGCCAGGCAAAGGCATCTGCTTTTCCAGCTTaGGCCGCAGCCGTGAGATGT +
Preference number: 4 (lower is better)
Translates to: LAGVTAGAGQPRLGQAKASAFPA*AAAVRC
Trigger: ACATCTCACGGCTGCGGCGCAAGCTGGAAAAGCAGA...TGCCTTTGCCTGGCCCAGGCGCGGTTGACCTGCCCCTGCTGTAACACCCGCAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567365.2
CDS-3UTR GCA 90 bp CCTTCTTGCGGGTGTTACAGCAGGGGCAGGTCAACCGCGCCTGGGCCAGGCAAAACCTCCACCTTCCTCTaGTTTTCCAGCTTGCGCCGC +
Preference number: 4 (lower is better)
Translates to: PSCGCYSRGRSTAPGPGKTSTFL*FSSLRR
Trigger: GCGGCGCAAGCTGGAAAAGCAGAGGAAGGTGGAGGT...TTTGCCTGGCCCAGGCGCGGTTGACCTGCCCCTGCTGTAACACCCGCAAGAAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000567365.2
CDS-3UTR GCA 90 bp ACCAGGAACTACACTTCCCAGGATGCAGCCCGAGGAGTCCCGGCATCCCCCGGCAGTGATGCCCCCATCTaGCAAGAGGGTACCTCCTTC +
Preference number: 4 (lower is better)
Translates to: TRNYTSQDAARGVPASPGSDAPI*QEGTSF
Trigger: GAAGGAGGTACCCTCTTGGCAGATGGGGGCATCACT...GCCGGGGGATGCCGGGACTCCTCGGGCTGCATCCTGGGAAGTGTAGTTCCTGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000324685.11
CDS-3UTR GCA 90 bp TCCCTTCCCCTCCTGGGAAGTTCCACCTCCACTGTAGTTAAGGCCACCAGGATGGGCCTCTCCGGGCACTaGCCTCACAGCCGATGGAGC +
Preference number: 4 (lower is better)
Translates to: SLPLLGSSTSTVVKATRMGLSGH*PHSRWS
Trigger: GCTCCATCGGCTGTGAGGGCAGTGCCCGGAGAGGCC...CATCCTGGTGGCCTTAACTACAGTGGAGGTGGAACTTCCCAGGAGGGGAAGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
ENST00000602784.1
CDS-3UTR GCA 90 bp GCCCGAGGTCACCGTGGCGGCCCGCGTCTCCTTCTCCAGTTCGTCCTGGTCCAGAAGCCAGCAAAGTGCTaGTCAGCTGCTGCAGCTAAA +
Preference number: 4 (lower is better)
Translates to: ARGHRGGPRLLLQFVLVQKPAKC*SAAAAK
Trigger: TTTAGCTGCAGCAGCTGAGCAGCACTTTGCTGGCTT...CTGGACCAGGACGAACTGGAGAAGGAGACGCGGGCCGCCACGGTGACCTCGGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324685.11
CDS-3UTR CCA 90 bp GTCCAGGGAACTCCACAGGACAGAAGCCCTGCCGAGGTTAGGGGGATGGTGGGTTCCCCCTGGCTCTCATaGCATCGGAGAAGGGCTTCC +
Preference number: 4 (lower is better)
Translates to: VQGTPQDRSPAEVRGMVGSPWLS*HRRRAS
Trigger: GGAAGCCCTTCTCCGATGCCATGAGAGCCAGGGGGA...ACCCACCATCCCCCTAACCTCGGCAGGGCTTCTGTCCTGTGGAGTTCCCTGGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR CCA 90 bp CCCCCATCTGCCAAGAGGGTACCTCCTTCAGCCCTTGGCACAAGAGCCAGACCAGGTGGGAGTTCTTTGTaGCCAGCAGCAGGCCCCGAG +
Preference number: 4 (lower is better)
Translates to: PPSAKRVPPSALGTRARPGGSSL*PAAGPE
Trigger: CTCGGGGCCTGCTGCTGGCCACAAAGAACTCCCACC...TGGTCTGGCTCTTGTGCCAAGGGCTGAAGGAGGTACCCTCTTGGCAGATGGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324685.11
ENST00000563683.5
CDS-3UTR CCA 90 bp GCAGGCAGACAGGACACAGGCTCAGTCACAGGGTGTCAGGGGGAAGCTCTTCTAGCAGAGCCACTGGCCTaGGCCCGGAGCTTGCCAATC +
Preference number: 4 (lower is better)
Translates to: AGRQDTGSVTGCQGEALLAEPLA*ARSLPI
Trigger: GATTGGCAAGCTCCGGGCCCAGGCCAGTGGCTCTGC...TAGAAGAGCTTCCCCCTGACACCCTGTGACTGAGCCTGTGTCCTGTCTGCCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR CCA 90 bp CAAGGACATGGCTCACTGGTCCTCATTTGTGAGCCAGTAGGCAGGGAGCGAGCCACCCTCCTCTTTCCCTaGGGCTGGGGCACTGACGCC +
Preference number: 4 (lower is better)
Translates to: QGHGSLVLICEPVGRERATLLFP*GWGTDA
Trigger: GGCGTCAGTGCCCCAGCCCCAGGGAAAGAGGAGGGT...GGCTCGCTCCCTGCCTACTGGCTCACAAATGAGGACCAGTGAGCCATGTCCTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR CCA 90 bp TCCACTGTAGTTAAGGCCACCAGGATGAAAGCAGGGTTAGGTCCAGGGACCCAGGCTCCCGCTTGGGCCTaGCCTCAGGTTCTCGGCCCC +
Preference number: 4 (lower is better)
Translates to: STVVKATRMKAGLGPGTQAPAWA*PQVLGP
Trigger: GGGGCCGAGAACCTGAGGCCAGGCCCAAGCGGGAGC...CTGGGTCCCTGGACCTAACCCTGCTTTCATCCTGGTGGCCTTAACTACAGTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR CCA 90 bp GAGGGTACCTCCTTCAGCCCTTGGCACAAGAGCCAGACCAAGGTGTCCAGGGAACCCGAAGCTCCCGCTTaGGCCTGGCCTCAGGTTCTC +
Preference number: 4 (lower is better)
Translates to: EGTSFSPWHKSQTKVSREPEAPA*AWPQVL
Trigger: GAGAACCTGAGGCCAGGCCCAAGCGGGAGCTTCGGG...TTCCCTGGACACCTTGGTCTGGCTCTTGTGCCAAGGGCTGAAGGAGGTACCCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR CCA 90 bp GTCCAGGGAACTCCACAGGACAGAAGCCCTGCCGAGGTTAGGGGGATGGTGGGTGTGGAGGTCCTAGGCTaGGACCTTCCCGTTCCCGAA +
Preference number: 4 (lower is better)
Translates to: VQGTPQDRSPAEVRGMVGVEVLG*DLPVPE
Trigger: TTCGGGAACGGGAAGGTCCCAGCCTAGGACCTCCAC...ACCCACCATCCCCCTAACCTCGGCAGGGCTTCTGTCCTGTGGAGTTCCCTGGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR CCA 90 bp CTTCTTGCGGGTGTTACAGCAGGGGCAGGTCAACCGCGCCTGGGCCAGGCAAAGTGCACAGTCAGCAGCTaGGCATCCACCTGGGACTTG +
Preference number: 4 (lower is better)
Translates to: LLAGVTAGAGQPRLGQAKCTVSS*ASTWDL
Trigger: CAAGTCCCAGGTGGATGCCCAGCTGCTGACTGTGCA...CTTTGCCTGGCCCAGGCGCGGTTGACCTGCCCCTGCTGTAACACCCGCAAGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567365.2
CDS-3UTR CCA 90 bp CCCCCATCTGCCAAGAGGGTACCTCCTTCAGCCCTTGGCACAAGAGCCAGACCACCACTAGACCTGGGGTaGGGAGGAGATGGGGGCACA +
Preference number: 4 (lower is better)
Translates to: PPSAKRVPPSALGTRARPPLDLG*GGDGGT
Trigger: TGTGCCCCCATCTCCTCCCCACCCCAGGTCTAGTGG...TGGTCTGGCTCTTGTGCCAAGGGCTGAAGGAGGTACCCTCTTGGCAGATGGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR CCA 90 bp ACCGCTCCGCACCGGCTCTGGCGCCAGCCCCAGTCCTGCCTCGGTGAAGGATCCCAAGGAACAAGGACATaGCTCACTGGTCCTCATTTG +
Preference number: 4 (lower is better)
Translates to: TAPHRLWRQPQSCLGEGSQGTRT*LTGPHL
Trigger: CAAATGAGGACCAGTGAGCCATGTCCTTGTTCCTTG...GGATCCTTCACCGAGGCAGGACTGGGGCTGGCGCCAGAGCCGGTGCGGAGCGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324685.11
CDS-3UTR CCA 90 bp GCCCGAGGAGTCCCGGCATCCCCCGGCCATGACAGCCAAGGACGTGGTCAGACCGGGGGTAAATGGGCTTaGCAGAGAAATGGAGATTGG +
Preference number: 4 (lower is better)
Translates to: ARGVPASPGHDSQGRGQTGGKWA*QRNGDW
Trigger: CCAATCTCCATTTCTCTGCCAAGCCCATTTACCCCC...GGTCTGACCACGTCCTTGGCTGTCATGGCCGGGGGATGCCGGGACTCCTCGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000324685.11
CDS-3UTR CCA 90 bp TACCTCCTTCAGCCCTTGGCACAAGAGCCAGACCAAGGTGTCCAGGGAACTCCACCCAGCGGCTGGGGCTaGTCTGTCCCTTCCCCTCCT +
Preference number: 4 (lower is better)
Translates to: YLLQPLAQEPDQGVQGTPPSGWG*SVPSPP
Trigger: AGGAGGGGAAGGGACAGACCAGCCCCAGCCGCTGGG...TGGAGTTCCCTGGACACCTTGGTCTGGCTCTTGTGCCAAGGGCTGAAGGAGGTA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
ENST00000602784.1
CDS-3UTR CCA 90 bp ATCCTTCTTGCGGGTGTTACAGCAGGGGCAGGTCAACCGCGCCTGGGCCAGGCACCAAGCCCACCACACTaGAGACTGCACCTCATCCTC +
Preference number: 4 (lower is better)
Translates to: ILLAGVTAGAGQPRLGQAPSPPH*RLHLIL
Trigger: GAGGATGAGGTGCAGTCTCCAGTGTGGTGGGCTTGG...TGCCTGGCCCAGGCGCGGTTGACCTGCCCCTGCTGTAACACCCGCAAGAAGGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567365.2
CDS-3UTR TCA 90 bp AGCTCCAACCCTCTGGCCTCTCCGGGCACTGCCCTCACAGCCGATGGAGCATGGCTCGGAGTACTCCAATaGGATGCGGTGGTGTTTCTC +
Preference number: 4 (lower is better)
Translates to: SSNPLASPGTALTADGAWLGVLQ*DAVVFL
Trigger: GAGAAACACCACCGCATCTCATTGGAGTACTCCGAG...CCATGCTCCATCGGCTGTGAGGGCAGTGCCCGGAGAGGCCAGAGGGTTGGAGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR TCA 90 bp TCCACTGTAGTTAAGGCCACCAGGATGAAAGCAGGGTTAGGTCCAGGGACCCAGGGCGCATCTCACGGTTaGTGGGCCCCGCCTGCTCGT +
Preference number: 4 (lower is better)
Translates to: STVVKATRMKAGLGPGTQGASHG*WAPPAR
Trigger: ACGAGCAGGCGGGGCCCATCAACCGTGAGATGCGCC...CTGGGTCCCTGGACCTAACCCTGCTTTCATCCTGGTGGCCTTAACTACAGTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR TCA 90 bp GCATCCACGGAGACAGACAGGTTAGGGCCAGTTTCCGGGAAGCTCAGTCAAGTGTGTTGTCGGGGGTACTaGCAGGGCCTGGCCCACCCT +
Preference number: 4 (lower is better)
Translates to: ASTETDRLGPVSGKLSQVCCRGY*QGLAHP
Trigger: AGGGTGGGCCAGGCCCTGTCAGTACCCCCGACAACA...CACTTGACTGAGCTTCCCGGAAACTGGCCCTAACCTGTCTGTCTCCGTGGATGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR TCA 90 bp GACAGACAGGTTAGGGCCAGTTTCCGGGAAGCTCAGTCAAGTGCTCTGGGCTCCCTCCCGATCAGCCCTTaGGAGAGCGGAGGCTACAGG +
Preference number: 4 (lower is better)
Translates to: DRQVRASFREAQSSALGSLPISP*ESGGYR
Trigger: CCTGTAGCCTCCGCTCTCTCAAGGGCTGATCGGGAG...GGAGCCCAGAGCACTTGACTGAGCTTCCCGGAAACTGGCCCTAACCTGTCTGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR TCA 90 bp GCCGAGGTTAGGGGGATGGTGGGTGAAGGAAAGTCTTCCTGGGGCCTGCAGCCCTCCCGCAGCAGCTTGTaGATCTGGTTGGCCTTGATC +
Preference number: 4 (lower is better)
Translates to: AEVRGMVGEGKSSWGLQPSRSSL*IWLALI
Trigger: GATCAAGGCCAACCAGATTCACAAGCTGCTGCGGGA...GGGCTGCAGGCCCCAGGAAGACTTTCCTTCACCCACCATCCCCCTAACCTCGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR TCA 90 bp GTGCGCGGCCTGGCTACTCTGGCTGCAGGCCGAGGGTTGAACGTTTATTCATCACATCCACCTGGGACTTaGGGCCAAGGACCTGCTCGC +
Preference number: 4 (lower is better)
Translates to: VRGLATLAAGRGLNVYSSHPPGT*GQGPAR
Trigger: GCGAGCAGGTCCTTGGCCTCAAGTCCCAGGTGGATG...TGATGAATAAACGTTCAACCCTCGGCCTGCAGCCAGAGTAGCCAGGCCGCGCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324685.11
ENST00000357890.9
CDS-3UTR TCA 90 bp GGGTGGCCTTTAGCGCAGATATCTAGAGAGACGATGCGGAATTACTTGGCATCTCGAAGGCGCCACCGCTaGGACGCACGCGGCCCCTGC +
Preference number: 4 (lower is better)
Translates to: GWPLAQISRETMRNYLASRRRHR*DARGPC
Trigger: GCAGGGGCCGCGTGCGTCTCAGCGGTGGCGCCTTCG...AGATGCCAAGTAATTCCGCATCGTCTCTCTAGATATCTGCGCTAAAGGCCACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324685.11
CDS-3UTR TCA 90 bp TACCTCCTTCAGCCCTTGGCACAAGAGCCAGACCAAGGTGTCCAGGGAACTCCATTACGGAGGCCTGGCTaGCCTCCACCCGTGACCGGT +
Preference number: 4 (lower is better)
Translates to: YLLQPLAQEPDQGVQGTPLRRPG*PPPVTG
Trigger: ACCGGTCACGGGTGGAGGTCAGCCAGGCCTCCGTAA...TGGAGTTCCCTGGACACCTTGGTCTGGCTCTTGTGCCAAGGGCTGAAGGAGGTA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324685.11
CDS-3UTR GCA 90 bp GTGCGCGGCCTGGCTACTCTGGCTGCAGGCCGAGGGTTGAACGTTTATTCATCAAGAGGGGGCCGCAGCTaGATCAGCAAGGGGTCTCTC +
Preference number: 4 (lower is better)
Translates to: VRGLATLAAGRGLNVYSSRGGRS*ISKGSL
Trigger: GAGAGACCCCTTGCTGATGCAGCTGCGGCCCCCTCT...TGATGAATAAACGTTCAACCCTCGGCCTGCAGCCAGAGTAGCCAGGCCGCGCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324685.11
ENST00000357890.9
CDS-3UTR GCA 90 bp ACGACCACCACGCTCTCCCCTTCAGGCCCAGTCCGGGATCCCTGCCGGCCGTTACAGCACCTTGGTCTCTaGCGATGTCACTTTATCCTG +
Preference number: 4 (lower is better)
Translates to: TTTTLSPSGPVRDPCRPLQHLGL*RCHFIL
Trigger: CAGGATAAAGTGACATCGGCAGAGACCAAGGTGCTG...TAACGGCCGGCAGGGATCCCGGACTGGGCCTGAAGGGGAGAGCGTGGTGGTCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324685.11
CDS-3UTR GCA 90 bp CAAGGACATGGCTCACTGGTCCTCATTTGTGAGCCAGTAGGCAGGGAGCGAGCCATTGGGCCTGCAGCATaGGGTACTCCCCCGTCTCCC +
Preference number: 4 (lower is better)
Translates to: QGHGSLVLICEPVGRERAIGPAA*GTPPSP
Trigger: GGGAGACGGGGGAGTACCGCATGCTGCAGGCCCAAT...GGCTCGCTCCCTGCCTACTGGCTCACAAATGAGGACCAGTGAGCCATGTCCTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000324685.11
ENST00000563683.5
CDS-3UTR GCA 90 bp GCCGAGGTTAGGGGGATGGTGGGTGAAGGAAAGTCTTCCTGGGGCCTGCAGCCCCCTGGGCCCGGAGCTTaGCAATCTCAGCTTGTACTT +
Preference number: 4 (lower is better)
Translates to: AEVRGMVGEGKSSWGLQPPGPGA*QSQLVL
Trigger: AAGTACAAGCTGAGATTGGCAAGCTCCGGGCCCAGG...GGGCTGCAGGCCCCAGGAAGACTTTCCTTCACCCACCATCCCCCTAACCTCGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR GCA 90 bp GCCGAGGTTAGGGGGATGGTGGGTGAAGGAAAGTCTTCCTGGGGCCTGCAGCCCAGCCTTGCGTTCCGCTaGCATGAGCTGCACCTTATC +
Preference number: 4 (lower is better)
Translates to: AEVRGMVGEGKSSWGLQPSLAFR*HELHLI
Trigger: GATAAGGTGCAGCTCATGGCAGCGGAACGCAAGGCT...GGGCTGCAGGCCCCAGGAAGACTTTCCTTCACCCACCATCCCCCTAACCTCGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR GCA 90 bp GGCCGCGTCTCTATGATGCAATATCCTGCGTTTTTCCCACCCTCGCACCGCTGCATCTGCTCCTCTGCCTaGCGAATGCGCCGCAGGGCA +
Preference number: 4 (lower is better)
Translates to: GRVSMMQYPAFFPPSHRCICSSA*RMRRRA
Trigger: TGCCCTGCGGCGCATTCGGCAGGCAGAGGAGCAGAT...GCAGCGGTGCGAGGGTGGGAAAAACGCAGGATATTGCATCATAGAGACGCGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324685.11
CDS-3UTR GCA 90 bp TGCATCCTTCTTGCGGGTGTTACAGCAGGGGCAGGTCAACCGCGCCTGGGCCAGTTGAGGCCAAGGACCTaGTCGCCCAACTCATCCTTC +
Preference number: 4 (lower is better)
Translates to: CILLAGVTAGAGQPRLGQLRPRT*SPNSSF
Trigger: GAAGGATGAGTTGGGCGAGCAGGTCCTTGGCCTCAA...CTGGCCCAGGCGCGGTTGACCTGCCCCTGCTGTAACACCCGCAAGAAGGATGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567365.2
CDS-3UTR GCA 90 bp GGGTACCTCCTTCAGCCCTTGGCACAAGAGCCAGACCAAGGTGTCCAGGGAACTGCTCCAGGGCTTGGCTaGGCAGCGTCAGCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: GYLLQPLAQEPDQGVQGTAPGLG*AASAPS
Trigger: AGAAGGAGCTGACGCTGCGCAGCCAAGCCCTGGAGC...AGTTCCCTGGACACCTTGGTCTGGCTCTTGTGCCAAGGGCTGAAGGAGGTACCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR GCA 90 bp GAACGAAGCTTGGCTGATCCCATGCCCACTAGCATGCACCAGGGTCCCCAAACCGCTCCAGGGCTTGGCTaGGCAGCGTCAGCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: ERSLADPMPTSMHQGPQTAPGLG*AASAPS
Trigger: AGAAGGAGCTGACGCTGCGCAGCCAAGCCCTGGAGC...GGTTTGGGGACCCTGGTGCATGCTAGTGGGCATGGGATCAGCCAAGCTTCGTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR GCA 90 bp AGTTCAGGCCGGCCTTTGGCCAGCGCAACCGGGAAACTAGCTCTCTCTCCGAGAAGCCGAGTCTGCACGTaGTCCAGCTGCACCTTCAGG +
Preference number: 4 (lower is better)
Translates to: SSGRPLASATGKLALSPRSRVCT*SSCTFR
Trigger: CCTGAAGGTGCAGCTGGAGCACGTGCAGACTCGGCT...TCTCGGAGAGAGAGCTAGTTTCCCGGTTGCGCTGGCCAAAGGCCGGCCTGAACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324685.11
CDS-3UTR GCA 90 bp CTTGCGGGTGTTACAGCAGGGGCAGGTCAACCGCGCCTGGGCCAGGCAAAGGCAGATTTCGTCGGCATCTaGGTAGACCTCCACCTTCCT +
Preference number: 4 (lower is better)
Translates to: LAGVTAGAGQPRLGQAKADFVGI*VDLHLP
Trigger: AGGAAGGTGGAGGTCTACGCAGATGCCGACGAAATC...TGCCTTTGCCTGGCCCAGGCGCGGTTGACCTGCCCCTGCTGTAACACCCGCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567365.2
CDS-3UTR GCA 90 bp CAAGGACATGGCTCACTGGTCCTCATTTGTGAGCCAGTAGGCAGGGAGCGAGCCGTCCAAACGGGTCCCTaGAGCTCCAACCCTCTGGCC +
Preference number: 4 (lower is better)
Translates to: QGHGSLVLICEPVGRERAVQTGP*SSNPLA
Trigger: GGCCAGAGGGTTGGAGCTGCAGGGACCCGTTTGGAC...GGCTCGCTCCCTGCCTACTGGCTCACAAATGAGGACCAGTGAGCCATGTCCTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
ENST00000602784.1
CDS-3UTR CCA 90 bp GCCGAGGTTAGGGGGATGGTGGGTGAAGGAAAGTCTTCCTGGGGCCTGCAGCCCGGTCCATCTCCTCCGTaGAAGAGATGCCTCCAAGAC +
Preference number: 4 (lower is better)
Translates to: AEVRGMVGEGKSSWGLQPGPSPP*KRCLQD
Trigger: GTCTTGGAGGCATCTCTTCCACGGAGGAGATGGACC...GGGCTGCAGGCCCCAGGAAGACTTTCCTTCACCCACCATCCCCCTAACCTCGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR CCA 90 bp GGCCGCGTCTCTATGATGCAATATCCTGCGTTTTTCCCACCCTCGCACCGCTGCGGTGGGAGTTCTTTGTaGCCAGCAGCAGGCCCCGAG +
Preference number: 4 (lower is better)
Translates to: GRVSMMQYPAFFPPSHRCGGSSL*PAAGPE
Trigger: CTCGGGGCCTGCTGCTGGCCACAAAGAACTCCCACC...GCAGCGGTGCGAGGGTGGGAAAAACGCAGGATATTGCATCATAGAGACGCGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324685.11
CDS-3UTR CCA 90 bp TCCCTTCCCCTCCTGGGAAGTTCCACCTCCACTGTAGTTAAGGCCACCAGGATGGCAGAGCCACTGGCCTaGGCCCGGAGCTTGCCAATC +
Preference number: 4 (lower is better)
Translates to: SLPLLGSSTSTVVKATRMAEPLA*ARSLPI
Trigger: GATTGGCAAGCTCCGGGCCCAGGCCAGTGGCTCTGC...CATCCTGGTGGCCTTAACTACAGTGGAGGTGGAACTTCCCAGGAGGGGAAGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR CCA 90 bp TACCTCCTTCAGCCCTTGGCACAAGAGCCAGACCAAGGTGTCCAGGGAACTCCAGCAGAGCCACTGGCCTaGGCCCGGAGCTTGCCAATC +
Preference number: 4 (lower is better)
Translates to: YLLQPLAQEPDQGVQGTPAEPLA*ARSLPI
Trigger: GATTGGCAAGCTCCGGGCCCAGGCCAGTGGCTCTGC...TGGAGTTCCCTGGACACCTTGGTCTGGCTCTTGTGCCAAGGGCTGAAGGAGGTA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR CCA 90 bp TCCCTTCCCCTCCTGGGAAGTTCCACCTCCACTGTAGTTAAGGCCACCAGGATGCCCGAAGCTCCCGCTTaGGCCTGGCCTCAGGTTCTC +
Preference number: 4 (lower is better)
Translates to: SLPLLGSSTSTVVKATRMPEAPA*AWPQVL
Trigger: GAGAACCTGAGGCCAGGCCCAAGCGGGAGCTTCGGG...CATCCTGGTGGCCTTAACTACAGTGGAGGTGGAACTTCCCAGGAGGGGAAGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR CCA 90 bp CCTCCTTCAGCCCTTGGCACAAGAGCCAGACCAAGGTGTCCAGGGAACTCCACACCACTAGACCTGGGGTaGGGAGGAGATGGGGGCACA +
Preference number: 4 (lower is better)
Translates to: PPSALGTRARPRCPGNSTPLDLG*GGDGGT
Trigger: TGTGCCCCCATCTCCTCCCCACCCCAGGTCTAGTGG...TGTGGAGTTCCCTGGACACCTTGGTCTGGCTCTTGTGCCAAGGGCTGAAGGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR CCA 90 bp GAACGAAGCTTGGCTGATCCCATGCCCACTAGCATGCACCAGGGTCCCCAAACCCCATGGGGTCCGGAATaGAGGGTGGGGCCACTAGAC +
Preference number: 4 (lower is better)
Translates to: ERSLADPMPTSMHQGPQTPWGPE*RVGPLD
Trigger: GTCTAGTGGCCCCACCCTCCATTCCGGACCCCATGG...GGTTTGGGGACCCTGGTGCATGCTAGTGGGCATGGGATCAGCCAAGCTTCGTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR CCA 90 bp TTAGGATGCATCCACGGAGACAGACAGGTTAGGGCCAGTTTCCGGGAAGCTCAGCAGGGGCTGGGCCCATaGGGTCCGGAATGGAGGGTG +
Preference number: 4 (lower is better)
Translates to: LGCIHGDRQVRASFREAQQGLGP*GPEWRV
Trigger: CACCCTCCATTCCGGACCCCATGGGCCCAGCCCCTG...CTGAGCTTCCCGGAAACTGGCCCTAACCTGTCTGTCTCCGTGGATGCATCCTAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR CCA 90 bp TCCCTTCCCCTCCTGGGAAGTTCCACCTCCACTGTAGTTAAGGCCACCAGGATGAGTTGGCCCAGCGGCTaGGGCTGGTCTGTCCCTTCC +
Preference number: 4 (lower is better)
Translates to: SLPLLGSSTSTVVKATRMSWPSG*GWSVPS
Trigger: GGAAGGGACAGACCAGCCCCAGCCGCTGGGCCAACT...CATCCTGGTGGCCTTAACTACAGTGGAGGTGGAACTTCCCAGGAGGGGAAGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
ENST00000602784.1
CDS-3UTR CCA 90 bp CCCCCATCTGCCAAGAGGGTACCTCCTTCAGCCCTTGGCACAAGAGCCAGACCAACAGCCGATGGAGCATaGCTGGGCAGGCAGACAGGA +
Preference number: 4 (lower is better)
Translates to: PPSAKRVPPSALGTRARPTADGA*LGRQTG
Trigger: TCCTGTCTGCCTGCCCAGCCATGCTCCATCGGCTGT...TGGTCTGGCTCTTGTGCCAAGGGCTGAAGGAGGTACCCTCTTGGCAGATGGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
ENST00000602784.1
CDS-3UTR TCA 90 bp AGCACCTGCAAGATGAGGAAGGTGACTGCAGCAACCTTAGAGCTTCCCAAAGGACCAAGGCCGGCTCACTaGGAGGGGGCCGCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: STCKMRKVTAATLELPKGPRPAH*EGAAAA
Trigger: TGCAGCTGCGGCCCCCTCTCAGTGAGCCGGCCTTGG...TCCTTTGGGAAGCTCTAAGGTTGCTGCAGTCACCTTCCTCATCTTGCAGGTGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR TCA 90 bp TACCTCCTTCAGCCCTTGGCACAAGAGCCAGACCAAGGTGTCCAGGGAACTCCACGGCTGTACACTCGCTaGCAGAGTTCCTCCACCCGG +
Preference number: 4 (lower is better)
Translates to: YLLQPLAQEPDQGVQGTPRLYTR*QSSSTR
Trigger: CCGGGTGGAGGAACTCTGTCAGCGAGTGTACAGCCG...TGGAGTTCCCTGGACACCTTGGTCTGGCTCTTGTGCCAAGGGCTGAAGGAGGTA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR TCA 90 bp ACAGCCTATACAAGCATCTCTAGAACAGAGGCTGTGGGTCCAAACGGGTCCCTGTCTCGGGTGTGTGCCTaGGCCGCCTCACTGAGGGGC +
Preference number: 4 (lower is better)
Translates to: TAYTSISRTEAVGPNGSLSRVCA*AASLRG
Trigger: GCCCCTCAGTGAGGCGGCTCAGGCACACACCCGAGA...CAGGGACCCGTTTGGACCCACAGCCTCTGTTCTAGAGATGCTTGTATAGGCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR TCA 90 bp TTAGGATGCATCCACGGAGACAGACAGGTTAGGGCCAGTTTCCGGGAAGCTCAGCTGGGGCTGGGGCACTaGCGCCAGAATCCTCTGGGT +
Preference number: 4 (lower is better)
Translates to: LGCIHGDRQVRASFREAQLGLGH*RQNPLG
Trigger: ACCCAGAGGATTCTGGCGTCAGTGCCCCAGCCCCAG...CTGAGCTTCCCGGAAACTGGCCCTAACCTGTCTGTCTCCGTGGATGCATCCTAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR TCA 90 bp GAGGGTACCTCCTTCAGCCCTTGGCACAAGAGCCAGACCAAGGTGTCCAGGGAATGCGTTCCGCTGCCATaGGCTGCACCTTATCCCGCT +
Preference number: 4 (lower is better)
Translates to: EGTSFSPWHKSQTKVSRECVPLP*AAPYPA
Trigger: AGCGGGATAAGGTGCAGCTCATGGCAGCGGAACGCA...TTCCCTGGACACCTTGGTCTGGCTCTTGTGCCAAGGGCTGAAGGAGGTACCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR TCA 90 bp GCATCCACGGAGACAGACAGGTTAGGGCCAGTTTCCGGGAAGCTCAGTCAAGTGCATCCACCTGGGACTTaGGGCCAAGGACCTGCTCGC +
Preference number: 4 (lower is better)
Translates to: ASTETDRLGPVSGKLSQVHPPGT*GQGPAR
Trigger: GCGAGCAGGTCCTTGGCCTCAAGTCCCAGGTGGATG...CACTTGACTGAGCTTCCCGGAAACTGGCCCTAACCTGTCTGTCTCCGTGGATGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR TCA 90 bp CCGCTCGGTACACGCCGCACCGCTCCCGAGGCCGATTGCAACGAGGGAAGTCACCTGCAGGCCGAGGGTTaGACGTTTATTCATCACAAT +
Preference number: 4 (lower is better)
Translates to: PLGTRRTAPEADCNEGSHLQAEG*TFIHHN
Trigger: ATTGTGATGAATAAACGTTCAACCCTCGGCCTGCAG...GTGACTTCCCTCGTTGCAATCGGCCTCGGGAGCGGTGCGGCGTGTACCGAGCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324685.11
CDS-3UTR GCA 90 bp TGGTTCAGCACCTGCAAGATGAGGAAGGTGACTGCAGCAACCTTAGAGCTTCCCCGGCGGCGCGTTTGTTaGCTGGCCCAGACATGGCCG +
Preference number: 4 (lower is better)
Translates to: WFSTCKMRKVTAATLELPRRRVC*LAQTWP
Trigger: CGGCCATGTCTGGGCCAGGCAACAAACGCGCCGCCG...GGGAAGCTCTAAGGTTGCTGCAGTCACCTTCCTCATCTTGCAGGTGCTGAACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR GCA 90 bp GCATCCACGGAGACAGACAGGTTAGGGCCAGTTTCCGGGAAGCTCAGTCAAGTGAGAGGGGGCCGCAGCTaGATCAGCAAGGGGTCTCTC +
Preference number: 4 (lower is better)
Translates to: ASTETDRLGPVSGKLSQVRGGRS*ISKGSL
Trigger: GAGAGACCCCTTGCTGATGCAGCTGCGGCCCCCTCT...CACTTGACTGAGCTTCCCGGAAACTGGCCCTAACCTGTCTGTCTCCGTGGATGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR GCA 90 bp CCTTCAGGCCCAGTCCGGGATCCCTGCCGGCCGTTAAGTCTGAGCCCTCCCAGGAAGGCCTCTGCCAGGTaGTTATTGAGCTTTTGCTCT +
Preference number: 4 (lower is better)
Translates to: PSGPVRDPCRPLSLSPPRKASAR*LLSFCS
Trigger: AGAGCAAAAGCTCAATAAGCACCTGGCAGAGGCCTT...CCTGGGAGGGCTCAGACTTAACGGCCGGCAGGGATCCCGGACTGGGCCTGAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324685.11
CDS-3UTR GCA 90 bp TCCCTTCCCCTCCTGGGAAGTTCCACCTCCACTGTAGTTAAGGCCACCAGGATGTTGATGGGCCCCGCCTaGTCGTTGGCCGCCAGATTC +
Preference number: 4 (lower is better)
Translates to: SLPLLGSSTSTVVKATRMLMGPA*SLAARF
Trigger: GAATCTGGCGGCCAACGAGCAGGCGGGGCCCATCAA...CATCCTGGTGGCCTTAACTACAGTGGAGGTGGAACTTCCCAGGAGGGGAAGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR GCA 90 bp AGTTCAGGCCGGCCTTTGGCCAGCGCAACCGGGAAACTAGCTCTCTCTCCGAGAGGCCTTCTTGAGCTCTaGTCGGAGACCCTTGAGGAG +
Preference number: 4 (lower is better)
Translates to: SSGRPLASATGKLALSPRGLLEL*SETLEE
Trigger: CTCCTCAAGGGTCTCCGAGCAGAGCTCAAGAAGGCC...TCTCGGAGAGAGAGCTAGTTTCCCGGTTGCGCTGGCCAAAGGCCGGCCTGAACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324685.11
CDS-3UTR GCA 90 bp CAAGGACATGGCTCACTGGTCCTCATTTGTGAGCCAGTAGGCAGGGAGCGAGCCTCCGCTGCCATGAGCTaGACCTTATCCCGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: QGHGSLVLICEPVGRERASAAMS*TLSRCS
Trigger: GGAGCAGCGGGATAAGGTGCAGCTCATGGCAGCGGA...GGCTCGCTCCCTGCCTACTGGCTCACAAATGAGGACCAGTGAGCCATGTCCTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR GCA 90 bp GCAGGCAGACAGGACACAGGCTCAGTCACAGGGTGTCAGGGGGAAGCTCTTCTAAGAGCCTCCTCCTCCTaGTTGGTGGCACCCAGCTTG +
Preference number: 4 (lower is better)
Translates to: AGRQDTGSVTGCQGEALLRASSS*LVAPSL
Trigger: CAAGCTGGGTGCCACCAAGCAGGAGGAGGAGGCTCT...TAGAAGAGCTTCCCCCTGACACCCTGTGACTGAGCCTGTGTCCTGTCTGCCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR GCA 90 bp GTCCAGGGAACTCCACAGGACAGAAGCCCTGCCGAGGTTAGGGGGATGGTGGGTTTGAGGCCAAGGACCTaGTCGCCCAACTCATCCTTC +
Preference number: 4 (lower is better)
Translates to: VQGTPQDRSPAEVRGMVGLRPRT*SPNSSF
Trigger: GAAGGATGAGTTGGGCGAGCAGGTCCTTGGCCTCAA...ACCCACCATCCCCCTAACCTCGGCAGGGCTTCTGTCCTGTGGAGTTCCCTGGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR GCA 90 bp GCAGGCAGACAGGACACAGGCTCAGTCACAGGGTGTCAGGGGGAAGCTCTTCTAAGCCGAGTCTGCACGTaGTCCAGCTGCACCTTCAGG +
Preference number: 4 (lower is better)
Translates to: AGRQDTGSVTGCQGEALLSRVCT*SSCTFR
Trigger: CCTGAAGGTGCAGCTGGAGCACGTGCAGACTCGGCT...TAGAAGAGCTTCCCCCTGACACCCTGTGACTGAGCCTGTGTCCTGTCTGCCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR GCA 90 bp ACCAGGAACTACACTTCCCAGGATGCAGCCCGAGGAGTCCCGGCATCCCCCGGCTCCTTAGGGTTAGGATaGATCCACGGAGACAGACAG +
Preference number: 4 (lower is better)
Translates to: TRNYTSQDAARGVPASPGSLGLG*IHGDRQ
Trigger: CTGTCTGTCTCCGTGGATGCATCCTAACCCTAAGGA...GCCGGGGGATGCCGGGACTCCTCGGGCTGCATCCTGGGAAGTGTAGTTCCTGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324685.11
CDS-3UTR GCA 90 bp AGGATGCAGCCCGAGGAGTCCCGGCATCCCCCGGCCATGACAGCCAAGGACGTGTGTTGGTTCAGCACCTaGAAGATGAGGAAGGTGACT +
Preference number: 4 (lower is better)
Translates to: RMQPEESRHPPAMTAKDVCWFST*KMRKVT
Trigger: AGTCACCTTCCTCATCTTGCAGGTGCTGAACCAACA...CACGTCCTTGGCTGTCATGGCCGGGGGATGCCGGGACTCCTCGGGCTGCATCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324685.11
CDS-3UTR GCA 90 bp AAGAGGGTACCTCCTTCAGCCCTTGGCACAAGAGCCAGACCAAGGTGTCCAGGGCATCGGCACTTTCTCTaGGGCCCGATGTCCTCCCCT +
Preference number: 4 (lower is better)
Translates to: KRVPPSALGTRARPRCPGHRHFL*GPMSSP
Trigger: AGGGGAGGACATCGGGCCGCAGAGAAAGTGCCGATG...CCCTGGACACCTTGGTCTGGCTCTTGTGCCAAGGGCTGAAGGAGGTACCCTCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324685.11
CDS-3UTR CCA 90 bp AGCACCTGCAAGATGAGGAAGGTGACTGCAGCAACCTTAGAGCTTCCCAAAGGACATGGCCGCGGCGGCTaGAGCGATGCAGGGTCCCCT +
Preference number: 4 (lower is better)
Translates to: STCKMRKVTAATLELPKGHGRGG*SDAGSP
Trigger: AGGGGACCCTGCATCGCTCCAGCCGCCGCGGCCATG...TCCTTTGGGAAGCTCTAAGGTTGCTGCAGTCACCTTCCTCATCTTGCAGGTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR CCA 90 bp TGGTTCAGCACCTGCAAGATGAGGAAGGTGACTGCAGCAACCTTAGAGCTTCCCGGCGCGTTTGTTGCCTaGCCCAGACATGGCCGCGGC +
Preference number: 4 (lower is better)
Translates to: WFSTCKMRKVTAATLELPGAFVA*PRHGRG
Trigger: GCCGCGGCCATGTCTGGGCCAGGCAACAAACGCGCC...GGGAAGCTCTAAGGTTGCTGCAGTCACCTTCCTCATCTTGCAGGTGCTGAACCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR CCA 90 bp GCCAAGAGGGTACCTCCTTCAGCCCTTGGCACAAGAGCCAGACCAAGGTGTCCATCCCCCTGGCTCTCATaGCATCGGAGAAGGGCTTCC +
Preference number: 4 (lower is better)
Translates to: AKRVPPSALGTRARPRCPSPWLS*HRRRAS
Trigger: GGAAGCCCTTCTCCGATGCCATGAGAGCCAGGGGGA...TGGACACCTTGGTCTGGCTCTTGTGCCAAGGGCTGAAGGAGGTACCCTCTTGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR CCA 90 bp CAAGGACATGGCTCACTGGTCCTCATTTGTGAGCCAGTAGGCAGGGAGCGAGCCAGTCCCATCACATGTTaGCCCCTCCTGGGTCCCAGG +
Preference number: 4 (lower is better)
Translates to: QGHGSLVLICEPVGRERASPITC*PLLGPR
Trigger: CCTGGGACCCAGGAGGGGCCAACATGTGATGGGACT...GGCTCGCTCCCTGCCTACTGGCTCACAAATGAGGACCAGTGAGCCATGTCCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR CCA 90 bp GGGTACCTCCTTCAGCCCTTGGCACAAGAGCCAGACCAAGGTGTCCAGGGAACTCCTCCTCACTGCTGCTaGCACCCAGTGCCACCACAA +
Preference number: 4 (lower is better)
Translates to: GYLLQPLAQEPDQGVQGTPPHCC*HPVPPQ
Trigger: TTGTGGTGGCACTGGGTGCCAGCAGCAGTGAGGAGG...AGTTCCCTGGACACCTTGGTCTGGCTCTTGTGCCAAGGGCTGAAGGAGGTACCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR CCA 90 bp GACAGACAGGTTAGGGCCAGTTTCCGGGAAGCTCAGTCAAGTGCTCTGGGCTCCTCTCCTGCAGCTGAGTaGCCAAGTCCTGCAGTCGCC +
Preference number: 4 (lower is better)
Translates to: DRQVRASFREAQSSALGSSPAAE*PSPAVA
Trigger: GGCGACTGCAGGACTTGGCCACTCAGCTGCAGGAGA...GGAGCCCAGAGCACTTGACTGAGCTTCCCGGAAACTGGCCCTAACCTGTCTGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR CCA 90 bp GCCAAGAGGGTACCTCCTTCAGCCCTTGGCACAAGAGCCAGACCAAGGTGTCCATCTCCTGCAGCTGAGTaGCCAAGTCCTGCAGTCGCC +
Preference number: 4 (lower is better)
Translates to: AKRVPPSALGTRARPRCPSPAAE*PSPAVA
Trigger: GGCGACTGCAGGACTTGGCCACTCAGCTGCAGGAGA...TGGACACCTTGGTCTGGCTCTTGTGCCAAGGGCTGAAGGAGGTACCCTCTTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR CCA 90 bp AAGAGGGTACCTCCTTCAGCCCTTGGCACAAGAGCCAGACCAAGGTGTCCAGGGTCTCCTGCAGCTGAGTaGCCAAGTCCTGCAGTCGCC +
Preference number: 4 (lower is better)
Translates to: KRVPPSALGTRARPRCPGSPAAE*PSPAVA
Trigger: GGCGACTGCAGGACTTGGCCACTCAGCTGCAGGAGA...CCCTGGACACCTTGGTCTGGCTCTTGTGCCAAGGGCTGAAGGAGGTACCCTCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR CCA 90 bp GTCCAGGGAACTCCACAGGACAGAAGCCCTGCCGAGGTTAGGGGGATGGTGGGTCGAGCCTCGTCTAGCTaGGTCTTCACTTGCAGAGAC +
Preference number: 4 (lower is better)
Translates to: VQGTPQDRSPAEVRGMVGRASSS*VFTCRD
Trigger: GTCTCTGCAAGTGAAGACCCAGCTAGACGAGGCTCG...ACCCACCATCCCCCTAACCTCGGCAGGGCTTCTGTCCTGTGGAGTTCCCTGGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000324685.11
ENST00000563683.5
CDS-3UTR CCA 90 bp GAGACGATGCGGAATTACTTGGCATCTACTCAAGAGCCCAGGCGAAGGCTACTCCGGGAGGAAGGGCCCTaGGCCCCAGGGGTTATACCC +
Preference number: 4 (lower is better)
Translates to: ETMRNYLASTQEPRRRLLREEGP*APGVIP
Trigger: GGGTATAACCCCTGGGGCCCAGGGCCCTTCCTCCCG...GAGTAGCCTTCGCCTGGGCTCTTGAGTAGATGCCAAGTAATTCCGCATCGTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324685.11
CDS-3UTR CCA 90 bp GTGCGCGGCCTGGCTACTCTGGCTGCAGGCCGAGGGTTGAACGTTTATTCATCAGTGGAGGTCCTAGGCTaGGACCTTCCCGTTCCCGAA +
Preference number: 4 (lower is better)
Translates to: VRGLATLAAGRGLNVYSSVEVLG*DLPVPE
Trigger: TTCGGGAACGGGAAGGTCCCAGCCTAGGACCTCCAC...TGATGAATAAACGTTCAACCCTCGGCCTGCAGCCAGAGTAGCCAGGCCGCGCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324685.11
ENST00000357890.9
CDS-3UTR CCA 90 bp CTGAGAAGCGGTCCGCAGGATCCAGTTCAGGCCGGCCTTTGGCCAGCGCAACCGCTGATTCCTTCCGCTTaGTTTCTTCCACCTTGGCCT +
Preference number: 4 (lower is better)
Translates to: LRSGPQDPVQAGLWPAQPLIPSA*FLPPWP
Trigger: AGGCCAAGGTGGAAGAAACCAAGCGGAAGGAATCAG...CGGTTGCGCTGGCCAAAGGCCGGCCTGAACTGGATCCTGCGGACCGCTTCTCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324685.11
CDS-3UTR CCA 90 bp GCATCCACGGAGACAGACAGGTTAGGGCCAGTTTCCGGGAAGCTCAGTCAAGTGTTGAGCTCCAGGGCTTaGCTGCGCAGCGTCAGCTCC +
Preference number: 4 (lower is better)
Translates to: ASTETDRLGPVSGKLSQVLSSRA*LRSVSS
Trigger: GGAGCTGACGCTGCGCAGCCAAGCCCTGGAGCTCAA...CACTTGACTGAGCTTCCCGGAAACTGGCCCTAACCTGTCTGTCTCCGTGGATGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR CCA 90 bp GGGTACCTCCTTCAGCCCTTGGCACAAGAGCCAGACCAAGGTGTCCAGGGAACTCCCAAACCAACTAGATaGGCAGGGGCTGGGCCCATG +
Preference number: 4 (lower is better)
Translates to: GYLLQPLAQEPDQGVQGTPKPTR*AGAGPM
Trigger: CATGGGCCCAGCCCCTGCCCATCTAGTTGGTTTGGG...AGTTCCCTGGACACCTTGGTCTGGCTCTTGTGCCAAGGGCTGAAGGAGGTACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR CCA 90 bp ACAAGCATCTCTAGAACAGAGGCTGTGGGTCCAAACGGGTCCCTGCAGCTCCAAAGTTGGCCCAGCGGCTaGGGCTGGTCTGTCCCTTCC +
Preference number: 4 (lower is better)
Translates to: TSISRTEAVGPNGSLQLQSWPSG*GWSVPS
Trigger: GGAAGGGACAGACCAGCCCCAGCCGCTGGGCCAACT...TTGGAGCTGCAGGGACCCGTTTGGACCCACAGCCTCTGTTCTAGAGATGCTTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
ENST00000602784.1
CDS-3UTR CCA 90 bp GCCGAGGTTAGGGGGATGGTGGGTGAAGGAAAGTCTTCCTGGGGCCTGCAGCCCTCTAGCTGGAATGATTaGAAGTTGGCCCAGCGGCTG +
Preference number: 4 (lower is better)
Translates to: AEVRGMVGEGKSSWGLQPSSWND*KLAQRL
Trigger: CAGCCGCTGGGCCAACTTCCAATCATTCCAGCTAGA...GGGCTGCAGGCCCCAGGAAGACTTTCCTTCACCCACCATCCCCCTAACCTCGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
ENST00000602784.1
CDS-3UTR CCA 90 bp CCTCCTTCAGCCCTTGGCACAAGAGCCAGACCAAGGTGTCCAGGGAACTCCACAACAGCCGATGGAGCATaGCTGGGCAGGCAGACAGGA +
Preference number: 4 (lower is better)
Translates to: PPSALGTRARPRCPGNSTTADGA*LGRQTG
Trigger: TCCTGTCTGCCTGCCCAGCCATGCTCCATCGGCTGT...TGTGGAGTTCCCTGGACACCTTGGTCTGGCTCTTGTGCCAAGGGCTGAAGGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
ENST00000602784.1
CDS-3UTR CCA 90 bp GCATCCACGGAGACAGACAGGTTAGGGCCAGTTTCCGGGAAGCTCAGTCAAGTGTGCCCTCACAGCCGATaGAGCATGGCTGGGCAGGCA +
Preference number: 4 (lower is better)
Translates to: ASTETDRLGPVSGKLSQVCPHSR*SMAGQA
Trigger: TGCCTGCCCAGCCATGCTCCATCGGCTGTGAGGGCA...CACTTGACTGAGCTTCCCGGAAACTGGCCCTAACCTGTCTGTCTCCGTGGATGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
ENST00000602784.1
CDS-3UTR CCA 90 bp AGGTGGCCGCGTCTCTATGATGCAATATCCTGCGTTTTTCCCACCCTCGCACCGTCGGGGGACTACATTTaGGGTGCGCGGCCTGGCTAC +
Preference number: 4 (lower is better)
Translates to: RWPRLYDAISCVFPTLAPSGDYI*GARPGY
Trigger: GTAGCCAGGCCGCGCACCCCAAATGTAGTCCCCCGA...CGGTGCGAGGGTGGGAAAAACGCAGGATATTGCATCATAGAGACGCGGCCACCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000324685.11
CDS-3UTR TCA 90 bp GGCCTGGCTACTCTGGCTGCAGGCCGAGGGTTGAACGTTTATTCATCACAATTACCTGAGCCGCCTCACTaGGGGGCTCACTGTCCCCTC +
Preference number: 4 (lower is better)
Translates to: GLATLAAGRGLNVYSSQLPEPPH*GAHCPL
Trigger: GAGGGGACAGTGAGCCCCTCAGTGAGGCGGCTCAGG...TAATTGTGATGAATAAACGTTCAACCCTCGGCCTGCAGCCAGAGTAGCCAGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324685.11
ENST00000357890.9
CDS-3UTR TCA 90 bp AGGGAACTCCACAGGACAGAAGCCCTGCCGAGGTTAGGGGGATGGTGGGTGAAGTGTTTCTCCTGCAGCTaGGTGGCCAAGTCCTGCAGT +
Preference number: 4 (lower is better)
Translates to: RELHRTEALPRLGGWWVKCFSCS*VAKSCS
Trigger: ACTGCAGGACTTGGCCACTCAGCTGCAGGAGAAACA...CTTCACCCACCATCCCCCTAACCTCGGCAGGGCTTCTGTCCTGTGGAGTTCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR TCA 90 bp ACAGCCTATACAAGCATCTCTAGAACAGAGGCTGTGGGTCCAAACGGGTCCCTGTGTTGTCGGGGGTACTaGCAGGGCCTGGCCCACCCT +
Preference number: 4 (lower is better)
Translates to: TAYTSISRTEAVGPNGSLCCRGY*QGLAHP
Trigger: AGGGTGGGCCAGGCCCTGTCAGTACCCCCGACAACA...CAGGGACCCGTTTGGACCCACAGCCTCTGTTCTAGAGATGCTTGTATAGGCTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR TCA 90 bp GAACGAAGCTTGGCTGATCCCATGCCCACTAGCATGCACCAGGGTCCCCAAACCACTGGTCCTCATTTGTaGGCCAGTAGGCAGGGAGCG +
Preference number: 4 (lower is better)
Translates to: ERSLADPMPTSMHQGPQTTGPHL*ASRQGA
Trigger: CGCTCCCTGCCTACTGGCTCACAAATGAGGACCAGT...GGTTTGGGGACCCTGGTGCATGCTAGTGGGCATGGGATCAGCCAAGCTTCGTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR TCA 90 bp GCCAAGAGGGTACCTCCTTCAGCCCTTGGCACAAGAGCCAGACCAAGGTGTCCAACTGGTCCTCATTTGTaGGCCAGTAGGCAGGGAGCG +
Preference number: 4 (lower is better)
Translates to: AKRVPPSALGTRARPRCPTGPHL*ASRQGA
Trigger: CGCTCCCTGCCTACTGGCTCACAAATGAGGACCAGT...TGGACACCTTGGTCTGGCTCTTGTGCCAAGGGCTGAAGGAGGTACCCTCTTGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
ENST00000602784.1
CDS-3UTR TCA 90 bp CCCCCATCTGCCAAGAGGGTACCTCCTTCAGCCCTTGGCACAAGAGCCAGACCACCCAAAGGAAGCAAGTaGTGCCCCCATCTGCCAAGA +
Preference number: 4 (lower is better)
Translates to: PPSAKRVPPSALGTRARPPKGSK*CPHLPR
Trigger: TCTTGGCAGATGGGGGCATCACTTGCTTCCTTTGGG...TGGTCTGGCTCTTGTGCCAAGGGCTGAAGGAGGTACCCTCTTGGCAGATGGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
ENST00000602784.1
CDS-3UTR TCA 90 bp CAAGGACATGGCTCACTGGTCCTCATTTGTGAGCCAGTAGGCAGGGAGCGAGCCGAGCCTTGGGATGCATaGGGTGGGGGTAAATGGGCT +
Preference number: 4 (lower is better)
Translates to: QGHGSLVLICEPVGRERAEPWDA*GGGKWA
Trigger: AGCCCATTTACCCCCACCTCATGCATCCCAAGGCTC...GGCTCGCTCCCTGCCTACTGGCTCACAAATGAGGACCAGTGAGCCATGTCCTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
ENST00000602784.1
CDS-3UTR TCA 90 bp CATCCTTCTTGCGGGTGTTACAGCAGGGGCAGGTCAACCGCGCCTGGGCCAGGCAACCCTTGTACTCCTTaGTCTCCTCCTGGAGGATTT +
Preference number: 4 (lower is better)
Translates to: HPSCGCYSRGRSTAPGPGNPCTP*SPPGGF
Trigger: AAATCCTCCAGGAGGAGATCAAGGAGTACAAGGGTT...GCCTGGCCCAGGCGCGGTTGACCTGCCCCTGCTGTAACACCCGCAAGAAGGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567365.2
CDS-3UTR GCA 90 bp AACAAGGAACAAGGACATGGCTCACTGGTCCTCATTTGTGAGCCAGTAGGCAGGCGGCGGCGCGTTTGTTaGCTGGCCCAGACATGGCCG +
Preference number: 4 (lower is better)
Translates to: NKEQGHGSLVLICEPVGRRRRVC*LAQTWP
Trigger: CGGCCATGTCTGGGCCAGGCAACAAACGCGCCGCCG...CCTGCCTACTGGCTCACAAATGAGGACCAGTGAGCCATGTCCTTGTTCCTTGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR GCA 90 bp GGGTACCTCCTTCAGCCCTTGGCACAAGAGCCAGACCAAGGTGTCCAGGGAACTAACTCCATTCGGCCTTaGAGCTCCAGCTCCACCTCC +
Preference number: 4 (lower is better)
Translates to: GYLLQPLAQEPDQGVQGTNSIRP*SSSSTS
Trigger: GGAGGTGGAGCTGGAGCTGCAAGGCCGAATGGAGTT...AGTTCCCTGGACACCTTGGTCTGGCTCTTGTGCCAAGGGCTGAAGGAGGTACCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR GCA 90 bp GTCCAGGGAACTCCACAGGACAGAAGCCCTGCCGAGGTTAGGGGGATGGTGGGTCACACGAGACACAGCTaGCTTGGAGAACTCCATTCG +
Preference number: 4 (lower is better)
Translates to: VQGTPQDRSPAEVRGMVGHTRHS*LGELHS
Trigger: CGAATGGAGTTCTCCAAGGCAGCTGTGTCTCGTGTG...ACCCACCATCCCCCTAACCTCGGCAGGGCTTCTGTCCTGTGGAGTTCCCTGGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR GCA 90 bp GAACGAAGCTTGGCTGATCCCATGCCCACTAGCATGCACCAGGGTCCCCAAACCTCGTCGCTCTCCATGTaGTCGATGTGTCGCAGGTGG +
Preference number: 4 (lower is better)
Translates to: ERSLADPMPTSMHQGPQTSSLSM*SMCRRW
Trigger: CCACCTGCGACACATCGAGCACATGGAGAGCGACGA...GGTTTGGGGACCCTGGTGCATGCTAGTGGGCATGGGATCAGCCAAGCTTCGTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324685.11
ENST00000563683.5
CDS-3UTR GCA 90 bp GAGGGTACCTCCTTCAGCCCTTGGCACAAGAGCCAGACCAAGGTGTCCAGGGAAGGCCTTCTTGAGCTCTaGTCGGAGACCCTTGAGGAG +
Preference number: 4 (lower is better)
Translates to: EGTSFSPWHKSQTKVSREGLLEL*SETLEE
Trigger: CTCCTCAAGGGTCTCCGAGCAGAGCTCAAGAAGGCC...TTCCCTGGACACCTTGGTCTGGCTCTTGTGCCAAGGGCTGAAGGAGGTACCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR GCA 90 bp GAGGGTACCTCCTTCAGCCCTTGGCACAAGAGCCAGACCAAGGTGTCCAGGGAATGCACCTTATCCCGCTaGTCCTTGGGCGCTGACTTG +
Preference number: 4 (lower is better)
Translates to: EGTSFSPWHKSQTKVSRECTLSR*SLGADL
Trigger: CAAGTCAGCGCCCAAGGAGCAGCGGGATAAGGTGCA...TTCCCTGGACACCTTGGTCTGGCTCTTGTGCCAAGGGCTGAAGGAGGTACCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR GCA 90 bp CCTCCTTCAGCCCTTGGCACAAGAGCCAGACCAAGGTGTCCAGGGAACTCCACATGCACCTTATCCCGCTaGTCCTTGGGCGCTGACTTG +
Preference number: 4 (lower is better)
Translates to: PPSALGTRARPRCPGNSTCTLSR*SLGADL
Trigger: CAAGTCAGCGCCCAAGGAGCAGCGGGATAAGGTGCA...TGTGGAGTTCCCTGGACACCTTGGTCTGGCTCTTGTGCCAAGGGCTGAAGGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR GCA 90 bp GAGGGTACCTCCTTCAGCCCTTGGCACAAGAGCCAGACCAAGGTGTCCAGGGAACCTCCAATTCCCGGATaGGGCTCCGCAGCTCATCAA +
Preference number: 4 (lower is better)
Translates to: EGTSFSPWHKSQTKVSREPPIPG*GSAAHQ
Trigger: TTGATGAGCTGCGGAGCCGCATCCGGGAATTGGAGG...TTCCCTGGACACCTTGGTCTGGCTCTTGTGCCAAGGGCTGAAGGAGGTACCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR GCA 90 bp TCCACTGTAGTTAAGGCCACCAGGATGAAAGCAGGGTTAGGTCCAGGGACCCAGCCTCTGCCTGCCGAATaGGCCGCAGGGCATCCTCAT +
Preference number: 4 (lower is better)
Translates to: STVVKATRMKAGLGPGTQPLPAE*AAGHPH
Trigger: ATGAGGATGCCCTGCGGCGCATTCGGCAGGCAGAGG...CTGGGTCCCTGGACCTAACCCTGCTTTCATCCTGGTGGCCTTAACTACAGTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR GCA 90 bp GCAGGCAGACAGGACACAGGCTCAGTCACAGGGTGTCAGGGGGAAGCTCTTCTATTCTATCTGCTCCTCTaGCTGCCGAATGCGCCGCAG +
Preference number: 4 (lower is better)
Translates to: AGRQDTGSVTGCQGEALLFYLLL*LPNAPQ
Trigger: CTGCGGCGCATTCGGCAGGCAGAGGAGCAGATAGAA...TAGAAGAGCTTCCCCCTGACACCCTGTGACTGAGCCTGTGTCCTGTCTGCCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR GCA 90 bp CCTCCTTCAGCCCTTGGCACAAGAGCCAGACCAAGGTGTCCAGGGAACTCCACATTCTATCTGCTCCTCTaGCTGCCGAATGCGCCGCAG +
Preference number: 4 (lower is better)
Translates to: PPSALGTRARPRCPGNSTFYLLL*LPNAPQ
Trigger: CTGCGGCGCATTCGGCAGGCAGAGGAGCAGATAGAA...TGTGGAGTTCCCTGGACACCTTGGTCTGGCTCTTGTGCCAAGGGCTGAAGGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR GCA 90 bp AAGAGGGTACCTCCTTCAGCCCTTGGCACAAGAGCCAGACCAAGGTGTCCAGGGGCACCCAGCTTGCGCTaGAGGTGTTCTATCTGCTCC +
Preference number: 4 (lower is better)
Translates to: KRVPPSALGTRARPRCPGAPSLR*RCSICS
Trigger: GGAGCAGATAGAACACCTGCAGCGCAAGCTGGGTGC...CCCTGGACACCTTGGTCTGGCTCTTGTGCCAAGGGCTGAAGGAGGTACCCTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR GCA 90 bp GTTAAGTCTGAGCCCTCCCAGGCTCACACCAAGCCAGCAAAGTGCTGCTCAGCTAGAGCCTCCTCCTCCTaGTTGGTGGCACCCAGCTTG +
Preference number: 4 (lower is better)
Translates to: VKSEPSQAHTKPAKCCSARASSS*LVAPSL
Trigger: CAAGCTGGGTGCCACCAAGCAGGAGGAGGAGGCTCT...AGCTGAGCAGCACTTTGCTGGCTTGGTGTGAGCCTGGGAGGGCTCAGACTTAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324685.11
CDS-3UTR GCA 90 bp GCAGGCAGACAGGACACAGGCTCAGTCACAGGGTGTCAGGGGGAAGCTCTTCTAACCTCCACCTTCCTCTaGTTTTCCAGCTTGCGCCGC +
Preference number: 4 (lower is better)
Translates to: AGRQDTGSVTGCQGEALLTSTFL*FSSLRR
Trigger: GCGGCGCAAGCTGGAAAAGCAGAGGAAGGTGGAGGT...TAGAAGAGCTTCCCCCTGACACCCTGTGACTGAGCCTGTGTCCTGTCTGCCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR GCA 90 bp GTCCAGGGAACTCCACAGGACAGAAGCCCTGCCGAGGTTAGGGGGATGGTGGGTGATTTCGTCGGCATCTaGGTAGACCTCCACCTTCCT +
Preference number: 4 (lower is better)
Translates to: VQGTPQDRSPAEVRGMVGDFVGI*VDLHLP
Trigger: AGGAAGGTGGAGGTCTACGCAGATGCCGACGAAATC...ACCCACCATCCCCCTAACCTCGGCAGGGCTTCTGTCCTGTGGAGTTCCCTGGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR GCA 90 bp GCCAAGAGGGTACCTCCTTCAGCCCTTGGCACAAGAGCCAGACCAAGGTGTCCACACCAAAGGCCGCGTTaGACTTGGGGCACTTCCTCT +
Preference number: 4 (lower is better)
Translates to: AKRVPPSALGTRARPRCPHQRPR*TWGTSS
Trigger: AGAGGAAGTGCCCCAAGTGCAACGCGGCCTTTGGTG...TGGACACCTTGGTCTGGCTCTTGTGCCAAGGGCTGAAGGAGGTACCCTCTTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR GCA 90 bp GAACGAAGCTTGGCTGATCCCATGCCCACTAGCATGCACCAGGGTCCCCAAACCGCTTGGCTGATCCCATaGCCACTAGCATGCACCAGG +
Preference number: 4 (lower is better)
Translates to: ERSLADPMPTSMHQGPQTAWLIP*PLACTR
Trigger: CCTGGTGCATGCTAGTGGGCATGGGATCAGCCAAGC...GGTTTGGGGACCCTGGTGCATGCTAGTGGGCATGGGATCAGCCAAGCTTCGTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR GCA 90 bp CAAGGACATGGCTCACTGGTCCTCATTTGTGAGCCAGTAGGCAGGGAGCGAGCCGCTTGGCTGATCCCATaGCCACTAGCATGCACCAGG +
Preference number: 4 (lower is better)
Translates to: QGHGSLVLICEPVGRERAAWLIP*PLACTR
Trigger: CCTGGTGCATGCTAGTGGGCATGGGATCAGCCAAGC...GGCTCGCTCCCTGCCTACTGGCTCACAAATGAGGACCAGTGAGCCATGTCCTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR GCA 90 bp CCTCCTTCAGCCCTTGGCACAAGAGCCAGACCAAGGTGTCCAGGGAACTCCACAGGAAGCTCAGTCAAGTaGTCTGGGCTCCTCAGGCCT +
Preference number: 4 (lower is better)
Translates to: PPSALGTRARPRCPGNSTGSSVK*SGLLRP
Trigger: AGGCCTGAGGAGCCCAGAGCACTTGACTGAGCTTCC...TGTGGAGTTCCCTGGACACCTTGGTCTGGCTCTTGTGCCAAGGGCTGAAGGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
ENST00000602784.1
CDS-3UTR GCA 90 bp AGGGAACTCCACAGGACAGAAGCCCTGCCGAGGTTAGGGGGATGGTGGGTGAAGAGTCTTCCTGGGGCCTaGAGCCCAGTCTCAAACAAG +
Preference number: 4 (lower is better)
Translates to: RELHRTEALPRLGGWWVKSLPGA*SPVSNK
Trigger: CTTGTTTGAGACTGGGCTGCAGGCCCCAGGAAGACT...CTTCACCCACCATCCCCCTAACCTCGGCAGGGCTTCTGTCCTGTGGAGTTCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
ENST00000602784.1
CDS-3UTR GCA 90 bp TCCACTGTAGTTAAGGCCACCAGGATGAAAGCAGGGTTAGGTCCAGGGACCCAGGTCCAAACGGGTCCCTaGAGCTCCAACCCTCTGGCC +
Preference number: 4 (lower is better)
Translates to: STVVKATRMKAGLGPGTQVQTGP*SSNPLA
Trigger: GGCCAGAGGGTTGGAGCTGCAGGGACCCGTTTGGAC...CTGGGTCCCTGGACCTAACCCTGCTTTCATCCTGGTGGCCTTAACTACAGTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
ENST00000602784.1
CDS-3UTR CCA 90 bp CAAGGACATGGCTCACTGGTCCTCATTTGTGAGCCAGTAGGCAGGGAGCGAGCCGAAGACAGCTCCCCCTaGCTCTCATGGCATCGGAGA +
Preference number: 4 (lower is better)
Translates to: QGHGSLVLICEPVGRERAEDSSP*LSWHRR
Trigger: TCTCCGATGCCATGAGAGCCAGGGGGAGCTGTCTTC...GGCTCGCTCCCTGCCTACTGGCTCACAAATGAGGACCAGTGAGCCATGTCCTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR CCA 90 bp AGGTGGCCGCGTCTCTATGATGCAATATCCTGCGTTTTTCCCACCCTCGCACCGTACTCCTTGCGTACCTaGGCCAGCGTGTCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: RWPRLYDAISCVFPTLAPYSLRT*ASVSSS
Trigger: GCTGGAGGACACGCTGGCCCAGGTACGCAAGGAGTA...CGGTGCGAGGGTGGGAAAAACGCAGGATATTGCATCATAGAGACGCGGCCACCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324685.11
CDS-3UTR CCA 90 bp TCCACTGTAGTTAAGGCCACCAGGATGAAAGCAGGGTTAGGTCCAGGGACCCAGGCCCCGCCTGCTCGTTaGCCGCCAGATTCTGCTCAA +
Preference number: 4 (lower is better)
Translates to: STVVKATRMKAGLGPGTQAPPAR*PPDSAQ
Trigger: TTGAGCAGAATCTGGCGGCCAACGAGCAGGCGGGGC...CTGGGTCCCTGGACCTAACCCTGCTTTCATCCTGGTGGCCTTAACTACAGTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR CCA 90 bp AGTTCAGGCCGGCCTTTGGCCAGCGCAACCGGGAAACTAGCTCTCTCTCCGAGATTCCGCTTGTATCGCTaGGCGTCCCCTTTTAGCTGG +
Preference number: 4 (lower is better)
Translates to: SSGRPLASATGKLALSPRFRLYR*ASPFSW
Trigger: CCAGCTAAAAGGGGACGCCCAGCGATACAAGCGGAA...TCTCGGAGAGAGAGCTAGTTTCCCGGTTGCGCTGGCCAAAGGCCGGCCTGAACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324685.11
CDS-3UTR CCA 90 bp GGCCTGGCTACTCTGGCTGCAGGCCGAGGGTTGAACGTTTATTCATCACAATTAAGTGGGCAGAGCCACTaGCCTGGGCCCGGAGCTTGC +
Preference number: 4 (lower is better)
Translates to: GLATLAAGRGLNVYSSQLSGQSH*PGPGAC
Trigger: GCAAGCTCCGGGCCCAGGCCAGTGGCTCTGCCCACT...TAATTGTGATGAATAAACGTTCAACCCTCGGCCTGCAGCCAGAGTAGCCAGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324685.11
ENST00000357890.9
CDS-3UTR CCA 90 bp TACCTCCTTCAGCCCTTGGCACAAGAGCCAGACCAAGGTGTCCAGGGAACTCCACTCTTTCCCTGGGGCTaGGGCACTGACGCCAGAATC +
Preference number: 4 (lower is better)
Translates to: YLLQPLAQEPDQGVQGTPLFPWG*GTDARI
Trigger: GATTCTGGCGTCAGTGCCCCAGCCCCAGGGAAAGAG...TGGAGTTCCCTGGACACCTTGGTCTGGCTCTTGTGCCAAGGGCTGAAGGAGGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR CCA 90 bp CCCCCATCTGCCAAGAGGGTACCTCCTTCAGCCCTTGGCACAAGAGCCAGACCACCAGGGGTTATACCCTaGAAGTCCTCTTCAGAGGGG +
Preference number: 4 (lower is better)
Translates to: PPSAKRVPPSALGTRARPPGVIP*KSSSEG
Trigger: CCCCTCTGAAGAGGACTTCCAGGGTATAACCCCTGG...TGGTCTGGCTCTTGTGCCAAGGGCTGAAGGAGGTACCCTCTTGGCAGATGGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR CCA 90 bp AAGAGGGTACCTCCTTCAGCCCTTGGCACAAGAGCCAGACCAAGGTGTCCAGGGTGCACAGTCAGCAGCTaGGCATCCACCTGGGACTTG +
Preference number: 4 (lower is better)
Translates to: KRVPPSALGTRARPRCPGCTVSS*ASTWDL
Trigger: CAAGTCCCAGGTGGATGCCCAGCTGCTGACTGTGCA...CCCTGGACACCTTGGTCTGGCTCTTGTGCCAAGGGCTGAAGGAGGTACCCTCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR CCA 90 bp ACAGCCTATACAAGCATCTCTAGAACAGAGGCTGTGGGTCCAAACGGGTCCCTGTCTGCCAGGCAGGGCTaGATCTCCCGCAGCCGAGTC +
Preference number: 4 (lower is better)
Translates to: TAYTSISRTEAVGPNGSLSARQG*ISRSRV
Trigger: GACTCGGCTGCGGGAGATCCAGCCCTGCCTGGCAGA...CAGGGACCCGTTTGGACCCACAGCCTCTGTTCTAGAGATGCTTGTATAGGCTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR CCA 90 bp ATCCTTCTTGCGGGTGTTACAGCAGGGGCAGGTCAACCGCGCCTGGGCCAGGCATCCTTGATCTCCTCCTaGAGGATTTCGTCGGCATCT +
Preference number: 4 (lower is better)
Translates to: ILLAGVTAGAGQPRLGQASLISS*RISSAS
Trigger: AGATGCCGACGAAATCCTCCAGGAGGAGATCAAGGA...TGCCTGGCCCAGGCGCGGTTGACCTGCCCCTGCTGTAACACCCGCAAGAAGGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567365.2
CDS-3UTR CCA 90 bp GCCGAGGTTAGGGGGATGGTGGGTGAAGGAAAGTCTTCCTGGGGCCTGCAGCCCAGATGGAACGAAGCTTaGCTGATCCCATGCCCACTA +
Preference number: 4 (lower is better)
Translates to: AEVRGMVGEGKSSWGLQPRWNEA*LIPCPL
Trigger: TAGTGGGCATGGGATCAGCCAAGCTTCGTTCCATCT...GGGCTGCAGGCCCCAGGAAGACTTTCCTTCACCCACCATCCCCCTAACCTCGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR CCA 90 bp AAGAGGGTACCTCCTTCAGCCCTTGGCACAAGAGCCAGACCAAGGTGTCCAGGGGAAGGAAAGTCTTCCTaGGGCCTGCAGCCCAGTCTC +
Preference number: 4 (lower is better)
Translates to: KRVPPSALGTRARPRCPGEGKSS*GLQPSL
Trigger: GAGACTGGGCTGCAGGCCCCAGGAAGACTTTCCTTC...CCCTGGACACCTTGGTCTGGCTCTTGTGCCAAGGGCTGAAGGAGGTACCCTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
ENST00000602784.1
CDS-3UTR CCA 90 bp CCTCCTTCAGCCCTTGGCACAAGAGCCAGACCAAGGTGTCCAGGGAACTCCACAGAAGGAAAGTCTTCCTaGGGCCTGCAGCCCAGTCTC +
Preference number: 4 (lower is better)
Translates to: PPSALGTRARPRCPGNSTEGKSS*GLQPSL
Trigger: GAGACTGGGCTGCAGGCCCCAGGAAGACTTTCCTTC...TGTGGAGTTCCCTGGACACCTTGGTCTGGCTCTTGTGCCAAGGGCTGAAGGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
ENST00000602784.1
CDS-3UTR CCA 90 bp CCCCCATCTGCCAAGAGGGTACCTCCTTCAGCCCTTGGCACAAGAGCCAGACCAACCTCCTTCAGCCCTTaGCACAAGAGCCAGACCAAG +
Preference number: 4 (lower is better)
Translates to: PPSAKRVPPSALGTRARPTSFSP*HKSQTK
Trigger: CTTGGTCTGGCTCTTGTGCCAAGGGCTGAAGGAGGT...TGGTCTGGCTCTTGTGCCAAGGGCTGAAGGAGGTACCCTCTTGGCAGATGGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
ENST00000602784.1
CDS-3UTR CCA 90 bp GCCAAGAGGGTACCTCCTTCAGCCCTTGGCACAAGAGCCAGACCAAGGTGTCCATGTCCCTTCCCCTCCTaGGAAGTTCCACCTCCACTG +
Preference number: 4 (lower is better)
Translates to: AKRVPPSALGTRARPRCPCPFPS*EVPPPL
Trigger: CAGTGGAGGTGGAACTTCCCAGGAGGGGAAGGGACA...TGGACACCTTGGTCTGGCTCTTGTGCCAAGGGCTGAAGGAGGTACCCTCTTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
ENST00000602784.1
CDS-3UTR CCA 90 bp GACAGACAGGTTAGGGCCAGTTTCCGGGAAGCTCAGTCAAGTGCTCTGGGCTCCTGTCCCTTCCCCTCCTaGGAAGTTCCACCTCCACTG +
Preference number: 4 (lower is better)
Translates to: DRQVRASFREAQSSALGSCPFPS*EVPPPL
Trigger: CAGTGGAGGTGGAACTTCCCAGGAGGGGAAGGGACA...GGAGCCCAGAGCACTTGACTGAGCTTCCCGGAAACTGGCCCTAACCTGTCTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
ENST00000602784.1
CDS-3UTR CCA 90 bp AGCACCTGCAAGATGAGGAAGGTGACTGCAGCAACCTTAGAGCTTCCCAAAGGAGCAGCTCCAACCCTCTaGCCTCTCCGGGCACTGCCC +
Preference number: 4 (lower is better)
Translates to: STCKMRKVTAATLELPKGAAPTL*PLRALP
Trigger: GGGCAGTGCCCGGAGAGGCCAGAGGGTTGGAGCTGC...TCCTTTGGGAAGCTCTAAGGTTGCTGCAGTCACCTTCCTCATCTTGCAGGTGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
ENST00000602784.1
CDS-3UTR TCA 90 bp AGGGAACTCCACAGGACAGAAGCCCTGCCGAGGTTAGGGGGATGGTGGGTGAAGCTGCCAGGTGCTTATTaGGCTTTTGCTCTCGCTTCC +
Preference number: 4 (lower is better)
Translates to: RELHRTEALPRLGGWWVKLPGAY*AFALAS
Trigger: GGAAGCGAGAGCAAAAGCTCAATAAGCACCTGGCAG...CTTCACCCACCATCCCCCTAACCTCGGCAGGGCTTCTGTCCTGTGGAGTTCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR TCA 90 bp ATGTTGGTTCAGCACCTGCAAGATGAGGAAGGTGACTGCAGCAACCTTAGAGCTGGCGCATCTCACGGTTaGTGGGCCCCGCCTGCTCGT +
Preference number: 4 (lower is better)
Translates to: MLVQHLQDEEGDCSNLRAGASHG*WAPPAR
Trigger: ACGAGCAGGCGGGGCCCATCAACCGTGAGATGCGCC...AGCTCTAAGGTTGCTGCAGTCACCTTCCTCATCTTGCAGGTGCTGAACCAACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR TCA 90 bp CACCTGCAAGATGAGGAAGGTGACTGCAGCAACCTTAGAGCTTCCCAAAGGAAGTGTTGTCGGGGGTACTaGCAGGGCCTGGCCCACCCT +
Preference number: 4 (lower is better)
Translates to: HLQDEEGDCSNLRASQRKCCRGY*QGLAHP
Trigger: AGGGTGGGCCAGGCCCTGTCAGTACCCCCGACAACA...CTTCCTTTGGGAAGCTCTAAGGTTGCTGCAGTCACCTTCCTCATCTTGCAGGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR TCA 90 bp GTGCGCGGCCTGGCTACTCTGGCTGCAGGCCGAGGGTTGAACGTTTATTCATCACTGCTCCTTGGGCGCTaGCTTGTACATATCCAGCAG +
Preference number: 4 (lower is better)
Translates to: VRGLATLAAGRGLNVYSSLLLGR*LVHIQQ
Trigger: CTGCTGGATATGTACAAGTCAGCGCCCAAGGAGCAG...TGATGAATAAACGTTCAACCCTCGGCCTGCAGCCAGAGTAGCCAGGCCGCGCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324685.11
ENST00000357890.9
CDS-3UTR TCA 90 bp GCCGAGGTTAGGGGGATGGTGGGTGAAGGAAAGTCTTCCTGGGGCCTGCAGCCCATGTCCTCAAAAGCCTaGCCTGTCACATCCATCTCT +
Preference number: 4 (lower is better)
Translates to: AEVRGMVGEGKSSWGLQPMSSKA*PVTSIS
Trigger: AGAGATGGATGTGACAGGTCAGGCTTTTGAGGACAT...GGGCTGCAGGCCCCAGGAAGACTTTCCTTCACCCACCATCCCCCTAACCTCGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR TCA 90 bp TGGTTCAGCACCTGCAAGATGAGGAAGGTGACTGCAGCAACCTTAGAGCTTCCCCAGCCTTCCGCTTGTTaGGCTCCAGGGCTTGGCTGC +
Preference number: 4 (lower is better)
Translates to: WFSTCKMRKVTAATLELPQPSAC*APGLGC
Trigger: GCAGCCAAGCCCTGGAGCTCAACAAGCGGAAGGCTG...GGGAAGCTCTAAGGTTGCTGCAGTCACCTTCCTCATCTTGCAGGTGCTGAACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR TCA 90 bp GAGGGTACCTCCTTCAGCCCTTGGCACAAGAGCCAGACCAAGGTGTCCAGGGAACCCAAAGGAAGCAAGTaGTGCCCCCATCTGCCAAGA +
Preference number: 4 (lower is better)
Translates to: EGTSFSPWHKSQTKVSREPKGSK*CPHLPR
Trigger: TCTTGGCAGATGGGGGCATCACTTGCTTCCTTTGGG...TTCCCTGGACACCTTGGTCTGGCTCTTGTGCCAAGGGCTGAAGGAGGTACCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
ENST00000602784.1
CDS-3UTR GCA 90 bp GACAGACAGGTTAGGGCCAGTTTCCGGGAAGCTCAGTCAAGTGCTCTGGGCTCCCCTCCGTGGAAGAGATaGCTCCAAGACGAATGGGCT +
Preference number: 4 (lower is better)
Translates to: DRQVRASFREAQSSALGSPPWKR*LQDEWA
Trigger: AGCCCATTCGTCTTGGAGGCATCTCTTCCACGGAGG...GGAGCCCAGAGCACTTGACTGAGCTTCCCGGAAACTGGCCCTAACCTGTCTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR GCA 90 bp GCCGCACCGCTCCCGAGGCCGATTGCAACGAGGGAAGTCACCCAGCTGAGGTGTAGCATCTCAAACTTCTaGATGCTGAGTGTGATCTGG +
Preference number: 4 (lower is better)
Translates to: AAPLPRPIATREVTQLRCSISNF*MLSVIW
Trigger: CCAGATCACACTCAGCATGCAGAAGTTTGAGATGCT...ACACCTCAGCTGGGTGACTTCCCTCGTTGCAATCGGCCTCGGGAGCGGTGCGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324685.11
CDS-3UTR GCA 90 bp GCAGGCAGACAGGACACAGGCTCAGTCACAGGGTGTCAGGGGGAAGCTCTTCTACAGTTTCTCCAGCTCTaGCATACGGCTGTTGGCCAG +
Preference number: 4 (lower is better)
Translates to: AGRQDTGSVTGCQGEALLQFLQL*HTAVGQ
Trigger: CTGGCCAACAGCCGTATGGCAGAGCTGGAGAAACTG...TAGAAGAGCTTCCCCCTGACACCCTGTGACTGAGCCTGTGTCCTGTCTGCCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324685.11
CDS-3UTR GCA 90 bp GAGACGATGCGGAATTACTTGGCATCTACTCAAGAGCCCAGGCGAAGGCTACTCATTGGGCCTGCAGCATaGGGTACTCCCCCGTCTCCC +
Preference number: 4 (lower is better)
Translates to: ETMRNYLASTQEPRRRLLIGPAA*GTPPSP
Trigger: GGGAGACGGGGGAGTACCGCATGCTGCAGGCCCAAT...GAGTAGCCTTCGCCTGGGCTCTTGAGTAGATGCCAAGTAATTCCGCATCGTCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324685.11
CDS-3UTR GCA 90 bp GCAGGCAGACAGGACACAGGCTCAGTCACAGGGTGTCAGGGGGAAGCTCTTCTATTGGCCGCCAGATTCTaGTCAAACTCGATGCGCAGC +
Preference number: 4 (lower is better)
Translates to: AGRQDTGSVTGCQGEALLLAARF*SNSMRS
Trigger: GCTGCGCATCGAGTTTGAGCAGAATCTGGCGGCCAA...TAGAAGAGCTTCCCCCTGACACCCTGTGACTGAGCCTGTGTCCTGTCTGCCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR GCA 90 bp GAGGGTACCTCCTTCAGCCCTTGGCACAAGAGCCAGACCAAGGTGTCCAGGGAATTGGCCGCCAGATTCTaGTCAAACTCGATGCGCAGC +
Preference number: 4 (lower is better)
Translates to: EGTSFSPWHKSQTKVSRELAARF*SNSMRS
Trigger: GCTGCGCATCGAGTTTGAGCAGAATCTGGCGGCCAA...TTCCCTGGACACCTTGGTCTGGCTCTTGTGCCAAGGGCTGAAGGAGGTACCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR GCA 90 bp GCATCCACGGAGACAGACAGGTTAGGGCCAGTTTCCGGGAAGCTCAGTCAAGTGTTCTATCTGCTCCTCTaGCTGCCGAATGCGCCGCAG +
Preference number: 4 (lower is better)
Translates to: ASTETDRLGPVSGKLSQVFYLLL*LPNAPQ
Trigger: CTGCGGCGCATTCGGCAGGCAGAGGAGCAGATAGAA...CACTTGACTGAGCTTCCCGGAAACTGGCCCTAACCTGTCTGTCTCCGTGGATGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR GCA 90 bp GCCAAGAGGGTACCTCCTTCAGCCCTTGGCACAAGAGCCAGACCAAGGTGTCCATGGTGGCACCCAGCTTaGGCTGCAGGTGTTCTATCT +
Preference number: 4 (lower is better)
Translates to: AKRVPPSALGTRARPRCPWWHPA*AAGVLS
Trigger: AGATAGAACACCTGCAGCGCAAGCTGGGTGCCACCA...TGGACACCTTGGTCTGGCTCTTGTGCCAAGGGCTGAAGGAGGTACCCTCTTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR GCA 90 bp CAAGGACATGGCTCACTGGTCCTCATTTGTGAGCCAGTAGGCAGGGAGCGAGCCTTGAGGCCAAGGACCTaGTCGCCCAACTCATCCTTC +
Preference number: 4 (lower is better)
Translates to: QGHGSLVLICEPVGRERALRPRT*SPNSSF
Trigger: GAAGGATGAGTTGGGCGAGCAGGTCCTTGGCCTCAA...GGCTCGCTCCCTGCCTACTGGCTCACAAATGAGGACCAGTGAGCCATGTCCTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR GCA 90 bp TGTTGGTTCAGCACCTGCAAGATGAGGAAGGTGACTGCAGCAACCTTAGAGCTTCCCCCGAGGCTGCCCTaGAAGGCTCGCTCCTTCTCC +
Preference number: 4 (lower is better)
Translates to: CWFSTCKMRKVTAATLELPPRLP*KARSFS
Trigger: GGAGAAGGAGCGAGCCTTGCAGGGCAGCCTCGGGGG...AAGCTCTAAGGTTGCTGCAGTCACCTTCCTCATCTTGCAGGTGCTGAACCAACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR GCA 90 bp AACAAGGAACAAGGACATGGCTCACTGGTCCTCATTTGTGAGCCAGTAGGCAGGTCCCGCAGCCGAGTCTaGACGTGCTCCAGCTGCACC +
Preference number: 4 (lower is better)
Translates to: NKEQGHGSLVLICEPVGRSRSRV*TCSSCT
Trigger: GGTGCAGCTGGAGCACGTGCAGACTCGGCTGCGGGA...CCTGCCTACTGGCTCACAAATGAGGACCAGTGAGCCATGTCCTTGTTCCTTGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR GCA 90 bp AGCACCTGCAAGATGAGGAAGGTGACTGCAGCAACCTTAGAGCTTCCCAAAGGATCCCGCAGCCGAGTCTaGACGTGCTCCAGCTGCACC +
Preference number: 4 (lower is better)
Translates to: STCKMRKVTAATLELPKGSRSRV*TCSSCT
Trigger: GGTGCAGCTGGAGCACGTGCAGACTCGGCTGCGGGA...TCCTTTGGGAAGCTCTAAGGTTGCTGCAGTCACCTTCCTCATCTTGCAGGTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR GCA 90 bp AGCACCTGCAAGATGAGGAAGGTGACTGCAGCAACCTTAGAGCTTCCCAAAGGAAGCAGCCCGGCTCTCTaGCAGGCAGGGCTGGATCTC +
Preference number: 4 (lower is better)
Translates to: STCKMRKVTAATLELPKGSSPAL*QAGLDL
Trigger: GAGATCCAGCCCTGCCTGGCAGAGAGCCGGGCTGCT...TCCTTTGGGAAGCTCTAAGGTTGCTGCAGTCACCTTCCTCATCTTGCAGGTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR GCA 90 bp GGGTACCTCCTTCAGCCCTTGGCACAAGAGCCAGACCAAGGTGTCCAGGGAACTTCTGCTTTTCCAGCTTaGGCCGCAGCCGTGAGATGT +
Preference number: 4 (lower is better)
Translates to: GYLLQPLAQEPDQGVQGTSAFPA*AAAVRC
Trigger: ACATCTCACGGCTGCGGCGCAAGCTGGAAAAGCAGA...AGTTCCCTGGACACCTTGGTCTGGCTCTTGTGCCAAGGGCTGAAGGAGGTACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR GCA 90 bp GGGTACCTCCTTCAGCCCTTGGCACAAGAGCCAGACCAAGGTGTCCAGGGAACTTTTTCTGTAGGGCAGTaGCCCCTAGGCTGCAGCTCT +
Preference number: 4 (lower is better)
Translates to: GYLLQPLAQEPDQGVQGTFSVGQ*PLGCSS
Trigger: AGAGCTGCAGCCTAGGGGGCACTGCCCTACAGAAAA...AGTTCCCTGGACACCTTGGTCTGGCTCTTGTGCCAAGGGCTGAAGGAGGTACCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
ENST00000602784.1
CDS-3UTR GCA 90 bp GCCAAGAGGGTACCTCCTTCAGCCCTTGGCACAAGAGCCAGACCAAGGTGTCCATTTTCTGTAGGGCAGTaGCCCCTAGGCTGCAGCTCT +
Preference number: 4 (lower is better)
Translates to: AKRVPPSALGTRARPRCPFSVGQ*PLGCSS
Trigger: AGAGCTGCAGCCTAGGGGGCACTGCCCTACAGAAAA...TGGACACCTTGGTCTGGCTCTTGTGCCAAGGGCTGAAGGAGGTACCCTCTTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
ENST00000602784.1
CDS-3UTR GCA 90 bp GACAGACAGGTTAGGGCCAGTTTCCGGGAAGCTCAGTCAAGTGCTCTGGGCTCCTTTTCTGTAGGGCAGTaGCCCCTAGGCTGCAGCTCT +
Preference number: 4 (lower is better)
Translates to: DRQVRASFREAQSSALGSFSVGQ*PLGCSS
Trigger: AGAGCTGCAGCCTAGGGGGCACTGCCCTACAGAAAA...GGAGCCCAGAGCACTTGACTGAGCTTCCCGGAAACTGGCCCTAACCTGTCTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
ENST00000602784.1
CDS-3UTR GCA 90 bp CAAGGACATGGCTCACTGGTCCTCATTTGTGAGCCAGTAGGCAGGGAGCGAGCCAGTCTTCCTGGGGCCTaGAGCCCAGTCTCAAACAAG +
Preference number: 4 (lower is better)
Translates to: QGHGSLVLICEPVGRERASLPGA*SPVSNK
Trigger: CTTGTTTGAGACTGGGCTGCAGGCCCCAGGAAGACT...GGCTCGCTCCCTGCCTACTGGCTCACAAATGAGGACCAGTGAGCCATGTCCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
ENST00000602784.1
CDS-3UTR GCA 90 bp ATGTTGGTTCAGCACCTGCAAGATGAGGAAGGTGACTGCAGCAACCTTAGAGCTGGCCTCTCCGGGCACTaGCCTCACAGCCGATGGAGC +
Preference number: 4 (lower is better)
Translates to: MLVQHLQDEEGDCSNLRAGLSGH*PHSRWS
Trigger: GCTCCATCGGCTGTGAGGGCAGTGCCCGGAGAGGCC...AGCTCTAAGGTTGCTGCAGTCACCTTCCTCATCTTGCAGGTGCTGAACCAACAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
ENST00000602784.1
CDS-3UTR GCA 90 bp CCTCCTTCAGCCCTTGGCACAAGAGCCAGACCAAGGTGTCCAGGGAACTCCACAACCAAGCCAGCAAAGTaGTGCTCAGCTGCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: PPSALGTRARPRCPGNSTTKPAK*CSAAAA
Trigger: AGCTGCAGCAGCTGAGCAGCACTTTGCTGGCTTGGT...TGTGGAGTTCCCTGGACACCTTGGTCTGGCTCTTGTGCCAAGGGCTGAAGGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324685.11
CDS-3UTR GCA 90 bp ATGTTGGTTCAGCACCTGCAAGATGAGGAAGGTGACTGCAGCAACCTTAGAGCTCGCCAGCCCCAGTCCTaGCTCGGTGAAGGATCCGCC +
Preference number: 4 (lower is better)
Translates to: MLVQHLQDEEGDCSNLRARQPQS*LGEGSA
Trigger: GGCGGATCCTTCACCGAGGCAGGACTGGGGCTGGCG...AGCTCTAAGGTTGCTGCAGTCACCTTCCTCATCTTGCAGGTGCTGAACCAACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324685.11
CDS-3UTR CCA 90 bp AAGAGGGTACCTCCTTCAGCCCTTGGCACAAGAGCCAGACCAAGGTGTCCAGGGGTGTGGCATCATCTGTaGCCTGCCGCTTCTCCAACT +
Preference number: 4 (lower is better)
Translates to: KRVPPSALGTRARPRCPGVWHHL*PAASPT
Trigger: AGTTGGAGAAGCGGCAGGCCACAGATGATGCCACAC...CCCTGGACACCTTGGTCTGGCTCTTGTGCCAAGGGCTGAAGGAGGTACCCTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR CCA 90 bp ACAAGCATCTCTAGAACAGAGGCTGTGGGTCCAAACGGGTCCCTGCAGCTCCAACCTCCTCACTGCTGCTaGCACCCAGTGCCACCACAA +
Preference number: 4 (lower is better)
Translates to: TSISRTEAVGPNGSLQLQPPHCC*HPVPPQ
Trigger: TTGTGGTGGCACTGGGTGCCAGCAGCAGTGAGGAGG...TTGGAGCTGCAGGGACCCGTTTGGACCCACAGCCTCTGTTCTAGAGATGCTTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR CCA 90 bp GCCGAGGTTAGGGGGATGGTGGGTGAAGGAAAGTCTTCCTGGGGCCTGCAGCCCCTGTTGGCCAGTTCCTaGTTTTCCTCTAACTCTGCA +
Preference number: 4 (lower is better)
Translates to: AEVRGMVGEGKSSWGLQPLLASS*FSSNSA
Trigger: TGCAGAGTTAGAGGAAAACCAGGAACTGGCCAACAG...GGGCTGCAGGCCCCAGGAAGACTTTCCTTCACCCACCATCCCCCTAACCTCGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000324685.11
CDS-3UTR CCA 90 bp GGGTACCTCCTTCAGCCCTTGGCACAAGAGCCAGACCAAGGTGTCCAGGGAACTCCAGGGGTTATACCCTaGAAGTCCTCTTCAGAGGGG +
Preference number: 4 (lower is better)
Translates to: GYLLQPLAQEPDQGVQGTPGVIP*KSSSEG
Trigger: CCCCTCTGAAGAGGACTTCCAGGGTATAACCCCTGG...AGTTCCCTGGACACCTTGGTCTGGCTCTTGTGCCAAGGGCTGAAGGAGGTACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR CCA 90 bp AGCACCTGCAAGATGAGGAAGGTGACTGCAGCAACCTTAGAGCTTCCCAAAGGACCCGAAGCTCCCGCTTaGGCCTGGCCTCAGGTTCTC +
Preference number: 4 (lower is better)
Translates to: STCKMRKVTAATLELPKGPEAPA*AWPQVL
Trigger: GAGAACCTGAGGCCAGGCCCAAGCGGGAGCTTCGGG...TCCTTTGGGAAGCTCTAAGGTTGCTGCAGTCACCTTCCTCATCTTGCAGGTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR CCA 90 bp GCAGGCAGACAGGACACAGGCTCAGTCACAGGGTGTCAGGGGGAAGCTCTTCTATGGTTTCTTCCACCTTaGCCTTCTCCCGATCAGCCC +
Preference number: 4 (lower is better)
Translates to: AGRQDTGSVTGCQGEALLWFLPP*PSPDQP
Trigger: GGGCTGATCGGGAGAAGGCCAAGGTGGAAGAAACCA...TAGAAGAGCTTCCCCCTGACACCCTGTGACTGAGCCTGTGTCCTGTCTGCCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR CCA 90 bp GGCCTGGCTACTCTGGCTGCAGGCCGAGGGTTGAACGTTTATTCATCACAATTATCTGCCAGGCAGGGCTaGATCTCCCGCAGCCGAGTC +
Preference number: 4 (lower is better)
Translates to: GLATLAAGRGLNVYSSQLSARQG*ISRSRV
Trigger: GACTCGGCTGCGGGAGATCCAGCCCTGCCTGGCAGA...TAATTGTGATGAATAAACGTTCAACCCTCGGCCTGCAGCCAGAGTAGCCAGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324685.11
ENST00000357890.9
CDS-3UTR CCA 90 bp GTGCGCGGCCTGGCTACTCTGGCTGCAGGCCGAGGGTTGAACGTTTATTCATCAATACGATGGAAGTCGTaGGCACCAAAGGCCGCGTTG +
Preference number: 4 (lower is better)
Translates to: VRGLATLAAGRGLNVYSSIRWKS*APKAAL
Trigger: CAACGCGGCCTTTGGTGCCCACGACTTCCATCGTAT...TGATGAATAAACGTTCAACCCTCGGCCTGCAGCCAGAGTAGCCAGGCCGCGCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324685.11
ENST00000357890.9
CDS-3UTR CCA 90 bp TACCTCCTTCAGCCCTTGGCACAAGAGCCAGACCAAGGTGTCCAGGGAACTCCAGAAGGAAAGTCTTCCTaGGGCCTGCAGCCCAGTCTC +
Preference number: 4 (lower is better)
Translates to: YLLQPLAQEPDQGVQGTPEGKSS*GLQPSL
Trigger: GAGACTGGGCTGCAGGCCCCAGGAAGACTTTCCTTC...TGGAGTTCCCTGGACACCTTGGTCTGGCTCTTGTGCCAAGGGCTGAAGGAGGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
ENST00000602784.1
CDS-3UTR CCA 90 bp CCCCCATCTGCCAAGAGGGTACCTCCTTCAGCCCTTGGCACAAGAGCCAGACCACCGAGGTTAGGGGGATaGTGGGTGAAGGAAAGTCTT +
Preference number: 4 (lower is better)
Translates to: PPSAKRVPPSALGTRARPPRLGG*WVKESL
Trigger: AAGACTTTCCTTCACCCACCATCCCCCTAACCTCGG...TGGTCTGGCTCTTGTGCCAAGGGCTGAAGGAGGTACCCTCTTGGCAGATGGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
ENST00000602784.1
CDS-3UTR CCA 90 bp ACAAGCATCTCTAGAACAGAGGCTGTGGGTCCAAACGGGTCCCTGCAGCTCCAAACAGCCGATGGAGCATaGCTGGGCAGGCAGACAGGA +
Preference number: 4 (lower is better)
Translates to: TSISRTEAVGPNGSLQLQTADGA*LGRQTG
Trigger: TCCTGTCTGCCTGCCCAGCCATGCTCCATCGGCTGT...TTGGAGCTGCAGGGACCCGTTTGGACCCACAGCCTCTGTTCTAGAGATGCTTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
ENST00000602784.1
CDS-3UTR CCA 90 bp TACCTCCTTCAGCCCTTGGCACAAGAGCCAGACCAAGGTGTCCAGGGAACTCCACTAGAACAGAGGCTGTaGGTCCAAACGGGTCCCTGC +
Preference number: 4 (lower is better)
Translates to: YLLQPLAQEPDQGVQGTPLEQRL*VQTGPC
Trigger: GCAGGGACCCGTTTGGACCCACAGCCTCTGTTCTAG...TGGAGTTCCCTGGACACCTTGGTCTGGCTCTTGTGCCAAGGGCTGAAGGAGGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
ENST00000602784.1
CDS-3UTR TCA 90 bp CAAGATGAGGAAGGTGACTGCAGCAACCTTAGAGCTTCCCAAAGGAAGCAAGTGAGGTGCCTCAGGCGCTaGAGACAGCTCCCCCTGGCT +
Preference number: 4 (lower is better)
Translates to: QDEEGDCSNLRASQRKQVRCLRR*RQLPLA
Trigger: AGCCAGGGGGAGCTGTCTTCAGCGCCTGAGGCACCT...CACTTGCTTCCTTTGGGAAGCTCTAAGGTTGCTGCAGTCACCTTCCTCATCTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR TCA 90 bp TCTAGAGAGACGATGCGGAATTACTTGGCATCTACTCAAGAGCCCAGGCGAAGGCGGCTGTACACTCGCTaGCAGAGTTCCTCCACCCGG +
Preference number: 4 (lower is better)
Translates to: SRETMRNYLASTQEPRRRRLYTR*QSSSTR
Trigger: CCGGGTGGAGGAACTCTGTCAGCGAGTGTACAGCCG...CCTTCGCCTGGGCTCTTGAGTAGATGCCAAGTAATTCCGCATCGTCTCTCTAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324685.11
CDS-3UTR TCA 90 bp GGCCGCGTCTCTATGATGCAATATCCTGCGTTTTTCCCACCCTCGCACCGCTGCTGTCCTCCAGCTGAATaGCCTCTGTGCGTAGCTTCT +
Preference number: 4 (lower is better)
Translates to: GRVSMMQYPAFFPPSHRCCPPAE*PLCVAS
Trigger: AGAAGCTACGCACAGAGGTCATTCAGCTGGAGGACA...GCAGCGGTGCGAGGGTGGGAAAAACGCAGGATATTGCATCATAGAGACGCGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324685.11
CDS-3UTR TCA 90 bp AGGGAACTCCACAGGACAGAAGCCCTGCCGAGGTTAGGGGGATGGTGGGTGAAGACCCTTGAGGAGTTCTaGTTCCTTCCGCTTGGTTTC +
Preference number: 4 (lower is better)
Translates to: RELHRTEALPRLGGWWVKTLEEF*FLPLGF
Trigger: GAAACCAAGCGGAAGGAATCAGAACTCCTCAAGGGT...CTTCACCCACCATCCCCCTAACCTCGGCAGGGCTTCTGTCCTGTGGAGTTCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR TCA 90 bp TCCCTTCCCCTCCTGGGAAGTTCCACCTCCACTGTAGTTAAGGCCACCAGGATGCTGCTCCTTGGGCGCTaGCTTGTACATATCCAGCAG +
Preference number: 4 (lower is better)
Translates to: SLPLLGSSTSTVVKATRMLLLGR*LVHIQQ
Trigger: CTGCTGGATATGTACAAGTCAGCGCCCAAGGAGCAG...CATCCTGGTGGCCTTAACTACAGTGGAGGTGGAACTTCCCAGGAGGGGAAGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR TCA 90 bp CAAGATGAGGAAGGTGACTGCAGCAACCTTAGAGCTTCCCAAAGGAAGCAAGTGCTTGCGCCGCAGCCGTaGGATGTCCTCCTGAGCCCT +
Preference number: 4 (lower is better)
Translates to: QDEEGDCSNLRASQRKQVLAPQP*DVLLSP
Trigger: AGGGCTCAGGAGGACATCTCACGGCTGCGGCGCAAG...CACTTGCTTCCTTTGGGAAGCTCTAAGGTTGCTGCAGTCACCTTCCTCATCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR TCA 90 bp ACAAGCATCTCTAGAACAGAGGCTGTGGGTCCAAACGGGTCCCTGCAGCTCCAAACTGGTCCTCATTTGTaGGCCAGTAGGCAGGGAGCG +
Preference number: 4 (lower is better)
Translates to: TSISRTEAVGPNGSLQLQTGPHL*ASRQGA
Trigger: CGCTCCCTGCCTACTGGCTCACAAATGAGGACCAGT...TTGGAGCTGCAGGGACCCGTTTGGACCCACAGCCTCTGTTCTAGAGATGCTTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
ENST00000602784.1
CDS-3UTR TCA 90 bp TACCTCCTTCAGCCCTTGGCACAAGAGCCAGACCAAGGTGTCCAGGGAACTCCACCCAAAGGAAGCAAGTaGTGCCCCCATCTGCCAAGA +
Preference number: 4 (lower is better)
Translates to: YLLQPLAQEPDQGVQGTPPKGSK*CPHLPR
Trigger: TCTTGGCAGATGGGGGCATCACTTGCTTCCTTTGGG...TGGAGTTCCCTGGACACCTTGGTCTGGCTCTTGTGCCAAGGGCTGAAGGAGGTA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
ENST00000602784.1
CDS-3UTR TCA 90 bp ACAAGCATCTCTAGAACAGAGGCTGTGGGTCCAAACGGGTCCCTGCAGCTCCAAGAGCCTTGGGATGCATaGGGTGGGGGTAAATGGGCT +
Preference number: 4 (lower is better)
Translates to: TSISRTEAVGPNGSLQLQEPWDA*GGGKWA
Trigger: AGCCCATTTACCCCCACCTCATGCATCCCAAGGCTC...TTGGAGCTGCAGGGACCCGTTTGGACCCACAGCCTCTGTTCTAGAGATGCTTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
ENST00000602784.1
CDS-3UTR GCA 90 bp CCTCCTTCAGCCCTTGGCACAAGAGCCAGACCAAGGTGTCCAGGGAACTCCACATCATCTTCACAAGCCTaGCGTTGTTCCAGCCGCTCT +
Preference number: 4 (lower is better)
Translates to: PPSALGTRARPRCPGNSTSSSQA*RCSSRS
Trigger: AGAGCGGCTGGAACAACGGCAGGCTTGTGAAGATGA...TGTGGAGTTCCCTGGACACCTTGGTCTGGCTCTTGTGCCAAGGGCTGAAGGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR GCA 90 bp AAGAGGGTACCTCCTTCAGCCCTTGGCACAAGAGCCAGACCAAGGTGTCCAGGGGCATCATCTGTGGCCTaGCGCTTCTCCAACTTCTCA +
Preference number: 4 (lower is better)
Translates to: KRVPPSALGTRARPRCPGASSVA*RFSNFS
Trigger: TGAGAAGTTGGAGAAGCGGCAGGCCACAGATGATGC...CCCTGGACACCTTGGTCTGGCTCTTGTGCCAAGGGCTGAAGGAGGTACCCTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR GCA 90 bp CACCTGCAAGATGAGGAAGGTGACTGCAGCAACCTTAGAGCTTCCCAAAGGAAGAGAGGGGGCCGCAGCTaGATCAGCAAGGGGTCTCTC +
Preference number: 4 (lower is better)
Translates to: HLQDEEGDCSNLRASQRKRGGRS*ISKGSL
Trigger: GAGAGACCCCTTGCTGATGCAGCTGCGGCCCCCTCT...CTTCCTTTGGGAAGCTCTAAGGTTGCTGCAGTCACCTTCCTCATCTTGCAGGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR GCA 90 bp AACAAGGAACAAGGACATGGCTCACTGGTCCTCATTTGTGAGCCAGTAGGCAGGCAGCTCTCGGGTGTGTaGCTGAGCCGCCTCACTGAG +
Preference number: 4 (lower is better)
Translates to: NKEQGHGSLVLICEPVGRQLSGV*LSRLTE
Trigger: CTCAGTGAGGCGGCTCAGGCACACACCCGAGAGCTG...CCTGCCTACTGGCTCACAAATGAGGACCAGTGAGCCATGTCCTTGTTCCTTGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR GCA 90 bp GTCCAGGGAACTCCACAGGACAGAAGCCCTGCCGAGGTTAGGGGGATGGTGGGTAGTACTCCAATGAGATaGGGTGGTGTTTCTCCTGCA +
Preference number: 4 (lower is better)
Translates to: VQGTPQDRSPAEVRGMVGSTPMR*GGVSPA
Trigger: TGCAGGAGAAACACCACCGCATCTCATTGGAGTACT...ACCCACCATCCCCCTAACCTCGGCAGGGCTTCTGTCCTGTGGAGTTCCCTGGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR GCA 90 bp GCATCCACGGAGACAGACAGGTTAGGGCCAGTTTCCGGGAAGCTCAGTCAAGTGAGCCTTGCGTTCCGCTaGCATGAGCTGCACCTTATC +
Preference number: 4 (lower is better)
Translates to: ASTETDRLGPVSGKLSQVSLAFR*HELHLI
Trigger: GATAAGGTGCAGCTCATGGCAGCGGAACGCAAGGCT...CACTTGACTGAGCTTCCCGGAAACTGGCCCTAACCTGTCTGTCTCCGTGGATGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR GCA 90 bp ACAGCCTATACAAGCATCTCTAGAACAGAGGCTGTGGGTCCAAACGGGTCCCTGAGAGCCTCCTCCTCCTaGTTGGTGGCACCCAGCTTG +
Preference number: 4 (lower is better)
Translates to: TAYTSISRTEAVGPNGSLRASSS*LVAPSL
Trigger: CAAGCTGGGTGCCACCAAGCAGGAGGAGGAGGCTCT...CAGGGACCCGTTTGGACCCACAGCCTCTGTTCTAGAGATGCTTGTATAGGCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR GCA 90 bp CAAGATGAGGAAGGTGACTGCAGCAACCTTAGAGCTTCCCAAAGGAAGCAAGTGTCCCGCAGCCGAGTCTaGACGTGCTCCAGCTGCACC +
Preference number: 4 (lower is better)
Translates to: QDEEGDCSNLRASQRKQVSRSRV*TCSSCT
Trigger: GGTGCAGCTGGAGCACGTGCAGACTCGGCTGCGGGA...CACTTGCTTCCTTTGGGAAGCTCTAAGGTTGCTGCAGTCACCTTCCTCATCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR GCA 90 bp TTACTTGGCATCTACTCAAGAGCCCAGGCGAAGGCTACTCCTGGAAGGGGACCGTCTGCTTTTCCAGCTTaGGCCGCAGCCGTGAGATGT +
Preference number: 4 (lower is better)
Translates to: LLGIYSRAQAKATPGRGPSAFPA*AAAVRC
Trigger: ACATCTCACGGCTGCGGCGCAAGCTGGAAAAGCAGA...CGGTCCCCTTCCAGGAGTAGCCTTCGCCTGGGCTCTTGAGTAGATGCCAAGTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324685.11
CDS-3UTR GCA 90 bp CCCCCATCTGCCAAGAGGGTACCTCCTTCAGCCCTTGGCACAAGAGCCAGACCAGCACTTGGTAAGGACTaGATCCTTCTTGCGGGTGTT +
Preference number: 4 (lower is better)
Translates to: PPSAKRVPPSALGTRARPALGKD*ILLAGV
Trigger: AACACCCGCAAGAAGGATGCAGTCCTTACCAAGTGC...TGGTCTGGCTCTTGTGCCAAGGGCTGAAGGAGGTACCCTCTTGGCAGATGGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR GCA 90 bp ACAGCCTATACAAGCATCTCTAGAACAGAGGCTGTGGGTCCAAACGGGTCCCTGCCTGGCTACTCTGGCTaGAGGCCGAGGGTTGAACGT +
Preference number: 4 (lower is better)
Translates to: TAYTSISRTEAVGPNGSLPGYSG*RPRVER
Trigger: ACGTTCAACCCTCGGCCTGCAGCCAGAGTAGCCAGG...CAGGGACCCGTTTGGACCCACAGCCTCTGTTCTAGAGATGCTTGTATAGGCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324685.11
ENST00000357890.9
CDS-3UTR CCA 90 bp TTGGGAAGGGGCCTGATTAGAATAGAAACTGATGATGTTGGTTCAGCACCTGCACATGGCCGCGGCGGCTaGAGCGATGCAGGGTCCCCT +
Preference number: 4 (lower is better)
Translates to: LGRGLIRIETDDVGSAPAHGRGG*SDAGSP
Trigger: AGGGGACCCTGCATCGCTCCAGCCGCCGCGGCCATG...TGCAGGTGCTGAACCAACATCATCAGTTTCTATTCTAATCAGGCCCCTTCCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR CCA 90 bp AAGAGGGTACCTCCTTCAGCCCTTGGCACAAGAGCCAGACCAAGGTGTCCAGGGGAGACACAGCTGCCTTaGAGAACTCCATTCGGCCTT +
Preference number: 4 (lower is better)
Translates to: KRVPPSALGTRARPRCPGETQLP*RTPFGL
Trigger: AAGGCCGAATGGAGTTCTCCAAGGCAGCTGTGTCTC...CCCTGGACACCTTGGTCTGGCTCTTGTGCCAAGGGCTGAAGGAGGTACCCTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR CCA 90 bp GCCAAGAGGGTACCTCCTTCAGCCCTTGGCACAAGAGCCAGACCAAGGTGTCCAGAGACACAGCTGCCTTaGAGAACTCCATTCGGCCTT +
Preference number: 4 (lower is better)
Translates to: AKRVPPSALGTRARPRCPETQLP*RTPFGL
Trigger: AAGGCCGAATGGAGTTCTCCAAGGCAGCTGTGTCTC...TGGACACCTTGGTCTGGCTCTTGTGCCAAGGGCTGAAGGAGGTACCCTCTTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR CCA 90 bp TTAAGTCTGAGCCCTCCCAGGCTCACACCAAGCCAGCAAAGTGCTGCTCAGCTGTCGATGTGTCGCAGGTaGGAGTTCTTTGTGGCCAGC +
Preference number: 4 (lower is better)
Translates to: LSLSPPRLTPSQQSAAQLSMCRR*EFFVAS
Trigger: GCTGGCCACAAAGAACTCCCACCTGCGACACATCGA...CAGCTGAGCAGCACTTTGCTGGCTTGGTGTGAGCCTGGGAGGGCTCAGACTTAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324685.11
CDS-3UTR CCA 90 bp GTTAAGTCTGAGCCCTCCCAGGCTCACACCAAGCCAGCAAAGTGCTGCTCAGCTTGGTTTCTTCCACCTTaGCCTTCTCCCGATCAGCCC +
Preference number: 4 (lower is better)
Translates to: VKSEPSQAHTKPAKCCSAWFLPP*PSPDQP
Trigger: GGGCTGATCGGGAGAAGGCCAAGGTGGAAGAAACCA...AGCTGAGCAGCACTTTGCTGGCTTGGTGTGAGCCTGGGAGGGCTCAGACTTAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324685.11
CDS-3UTR CCA 90 bp TACCTCCTTCAGCCCTTGGCACAAGAGCCAGACCAAGGTGTCCAGGGAACTCCAATACGATGGAAGTCGTaGGCACCAAAGGCCGCGTTG +
Preference number: 4 (lower is better)
Translates to: YLLQPLAQEPDQGVQGTPIRWKS*APKAAL
Trigger: CAACGCGGCCTTTGGTGCCCACGACTTCCATCGTAT...TGGAGTTCCCTGGACACCTTGGTCTGGCTCTTGTGCCAAGGGCTGAAGGAGGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR CCA 90 bp AGGGAACTCCACAGGACAGAAGCCCTGCCGAGGTTAGGGGGATGGTGGGTGAAGAGATGGAACGAAGCTTaGCTGATCCCATGCCCACTA +
Preference number: 4 (lower is better)
Translates to: RELHRTEALPRLGGWWVKRWNEA*LIPCPL
Trigger: TAGTGGGCATGGGATCAGCCAAGCTTCGTTCCATCT...CTTCACCCACCATCCCCCTAACCTCGGCAGGGCTTCTGTCCTGTGGAGTTCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR CCA 90 bp ACAAGCATCTCTAGAACAGAGGCTGTGGGTCCAAACGGGTCCCTGCAGCTCCAAGAAGGAAAGTCTTCCTaGGGCCTGCAGCCCAGTCTC +
Preference number: 4 (lower is better)
Translates to: TSISRTEAVGPNGSLQLQEGKSS*GLQPSL
Trigger: GAGACTGGGCTGCAGGCCCCAGGAAGACTTTCCTTC...TTGGAGCTGCAGGGACCCGTTTGGACCCACAGCCTCTGTTCTAGAGATGCTTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
ENST00000602784.1
CDS-3UTR CCA 90 bp CCTCCTTCAGCCCTTGGCACAAGAGCCAGACCAAGGTGTCCAGGGAACTCCACACCGAGGTTAGGGGGATaGTGGGTGAAGGAAAGTCTT +
Preference number: 4 (lower is better)
Translates to: PPSALGTRARPRCPGNSTPRLGG*WVKESL
Trigger: AAGACTTTCCTTCACCCACCATCCCCCTAACCTCGG...TGTGGAGTTCCCTGGACACCTTGGTCTGGCTCTTGTGCCAAGGGCTGAAGGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
ENST00000602784.1
CDS-3UTR CCA 90 bp GCATCCACGGAGACAGACAGGTTAGGGCCAGTTTCCGGGAAGCTCAGTCAAGTGACCTCCTTCAGCCCTTaGCACAAGAGCCAGACCAAG +
Preference number: 4 (lower is better)
Translates to: ASTETDRLGPVSGKLSQVTSFSP*HKSQTK
Trigger: CTTGGTCTGGCTCTTGTGCCAAGGGCTGAAGGAGGT...CACTTGACTGAGCTTCCCGGAAACTGGCCCTAACCTGTCTGTCTCCGTGGATGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
ENST00000602784.1
CDS-3UTR CCA 90 bp AGGGAACTCCACAGGACAGAAGCCCTGCCGAGGTTAGGGGGATGGTGGGTGAAGGGGGGTAAATGGGCTTaGCAGAGAAATGGAGATTGG +
Preference number: 4 (lower is better)
Translates to: RELHRTEALPRLGGWWVKGGKWA*QRNGDW
Trigger: CCAATCTCCATTTCTCTGCCAAGCCCATTTACCCCC...CTTCACCCACCATCCCCCTAACCTCGGCAGGGCTTCTGTCCTGTGGAGTTCCCT
57% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
ENST00000602784.1
CDS-3UTR CCA 90 bp TTAGGATGCATCCACGGAGACAGACAGGTTAGGGCCAGTTTCCGGGAAGCTCAGTGTCCCTTCCCCTCCTaGGAAGTTCCACCTCCACTG +
Preference number: 4 (lower is better)
Translates to: LGCIHGDRQVRASFREAQCPFPS*EVPPPL
Trigger: CAGTGGAGGTGGAACTTCCCAGGAGGGGAAGGGACA...CTGAGCTTCCCGGAAACTGGCCCTAACCTGTCTGTCTCCGTGGATGCATCCTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
ENST00000602784.1
CDS-3UTR CCA 90 bp GGGTACCTCCTTCAGCCCTTGGCACAAGAGCCAGACCAAGGTGTCCAGGGAACTTCTAGCTGGAATGATTaGAAGTTGGCCCAGCGGCTG +
Preference number: 4 (lower is better)
Translates to: GYLLQPLAQEPDQGVQGTSSWND*KLAQRL
Trigger: CAGCCGCTGGGCCAACTTCCAATCATTCCAGCTAGA...AGTTCCCTGGACACCTTGGTCTGGCTCTTGTGCCAAGGGCTGAAGGAGGTACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
ENST00000602784.1
CDS-3UTR CCA 90 bp GTCCAGGGAACTCCACAGGACAGAAGCCCTGCCGAGGTTAGGGGGATGGTGGGTGGAAGCTCTTCTAGCTaGAATGATTGGAAGTTGGCC +
Preference number: 4 (lower is better)
Translates to: VQGTPQDRSPAEVRGMVGGSSSS*NDWKLA
Trigger: GGCCAACTTCCAATCATTCCAGCTAGAAGAGCTTCC...ACCCACCATCCCCCTAACCTCGGCAGGGCTTCTGTCCTGTGGAGTTCCCTGGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
ENST00000602784.1
CDS-3UTR CCA 90 bp ACAAGCATCTCTAGAACAGAGGCTGTGGGTCCAAACGGGTCCCTGCAGCTCCAACTAGAACAGAGGCTGTaGGTCCAAACGGGTCCCTGC +
Preference number: 4 (lower is better)
Translates to: TSISRTEAVGPNGSLQLQLEQRL*VQTGPC
Trigger: GCAGGGACCCGTTTGGACCCACAGCCTCTGTTCTAG...TTGGAGCTGCAGGGACCCGTTTGGACCCACAGCCTCTGTTCTAGAGATGCTTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
ENST00000602784.1
CDS-3UTR CCA 90 bp ATGTTGGTTCAGCACCTGCAAGATGAGGAAGGTGACTGCAGCAACCTTAGAGCTTTCTCCAGTTCGTCCTaGTCCAGCAGCGGCGGCCCC +
Preference number: 4 (lower is better)
Translates to: MLVQHLQDEEGDCSNLRAFSSSS*SSSGGP
Trigger: GGGGCCGCCGCTGCTGGACCAGGACGAACTGGAGAA...AGCTCTAAGGTTGCTGCAGTCACCTTCCTCATCTTGCAGGTGCTGAACCAACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324685.11
CDS-3UTR CCA 90 bp AACAAGGAACAAGGACATGGCTCACTGGTCCTCATTTGTGAGCCAGTAGGCAGGAGCTCTGACCTGGGGTaGGGAGGAGATGGGGGCACA +
Preference number: 4 (lower is better)
Translates to: NKEQGHGSLVLICEPVGRSSDLG*GGDGGT
Trigger: TGTGCCCCCATCTCCTCCCCACCCCAGGTCAGAGCT...CCTGCCTACTGGCTCACAAATGAGGACCAGTGAGCCATGTCCTTGTTCCTTGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000602784.1
CDS-3UTR TCA 90 bp TACCTCCTTCAGCCCTTGGCACAAGAGCCAGACCAAGGTGTCCAGGGAACTCCACTCGGAGTACTCCAATaGGATGCGGTGGTGTTTCTC +
Preference number: 4 (lower is better)
Translates to: YLLQPLAQEPDQGVQGTPLGVLQ*DAVVFL
Trigger: GAGAAACACCACCGCATCTCATTGGAGTACTCCGAG...TGGAGTTCCCTGGACACCTTGGTCTGGCTCTTGTGCCAAGGGCTGAAGGAGGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR TCA 90 bp TTAGGATGCATCCACGGAGACAGACAGGTTAGGGCCAGTTTCCGGGAAGCTCAGCTGCTCGGAGACCCTTaGGGAGTTCTGATTCCTTCC +
Preference number: 4 (lower is better)
Translates to: LGCIHGDRQVRASFREAQLLGDP*GVLIPS
Trigger: GGAAGGAATCAGAACTCCTCAAGGGTCTCCGAGCAG...CTGAGCTTCCCGGAAACTGGCCCTAACCTGTCTGTCTCCGTGGATGCATCCTAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR TCA 90 bp GGCCTGGCTACTCTGGCTGCAGGCCGAGGGTTGAACGTTTATTCATCACAATTATGCGTTCCGCTGCCATaGGCTGCACCTTATCCCGCT +
Preference number: 4 (lower is better)
Translates to: GLATLAAGRGLNVYSSQLCVPLP*AAPYPA
Trigger: AGCGGGATAAGGTGCAGCTCATGGCAGCGGAACGCA...TAATTGTGATGAATAAACGTTCAACCCTCGGCCTGCAGCCAGAGTAGCCAGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324685.11
ENST00000357890.9
CDS-3UTR TCA 90 bp ATGTTGGTTCAGCACCTGCAAGATGAGGAAGGTGACTGCAGCAACCTTAGAGCTCAGCCTTCCGCTTGTTaGGCTCCAGGGCTTGGCTGC +
Preference number: 4 (lower is better)
Translates to: MLVQHLQDEEGDCSNLRAQPSAC*APGLGC
Trigger: GCAGCCAAGCCCTGGAGCTCAACAAGCGGAAGGCTG...AGCTCTAAGGTTGCTGCAGTCACCTTCCTCATCTTGCAGGTGCTGAACCAACAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR TCA 90 bp TTTTCCTTAGGGTTAGGATGCATCCACGGAGACAGACAGGTTAGGGCCAGTTTCCAGCCTTCCGCTTGTTaGGCTCCAGGGCTTGGCTGC +
Preference number: 4 (lower is better)
Translates to: FSLGLGCIHGDRQVRASFQPSAC*APGLGC
Trigger: GCAGCCAAGCCCTGGAGCTCAACAAGCGGAAGGCTG...GAAACTGGCCCTAACCTGTCTGTCTCCGTGGATGCATCCTAACCCTAAGGAAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR TCA 90 bp CAATTAACAGCCTATACAAGCATCTCTAGAACAGAGGCTGTGGGTCCAAACGGGCTTGCGCCGCAGCCGTaGGATGTCCTCCTGAGCCCT +
Preference number: 4 (lower is better)
Translates to: QLTAYTSISRTEAVGPNGLAPQP*DVLLSP
Trigger: AGGGCTCAGGAGGACATCTCACGGCTGCGGCGCAAG...CCCGTTTGGACCCACAGCCTCTGTTCTAGAGATGCTTGTATAGGCTGTTAATTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR TCA 90 bp AAGAGGGTACCTCCTTCAGCCCTTGGCACAAGAGCCAGACCAAGGTGTCCAGGGCCTAGGCTGCAGCTCTaGCCTTTAGGAAAAGATGGA +
Preference number: 4 (lower is better)
Translates to: KRVPPSALGTRARPRCPGPRLQL*PLGKDG
Trigger: TCCATCTTTTCCTAAAGGTCAGAGCTGCAGCCTAGG...CCCTGGACACCTTGGTCTGGCTCTTGTGCCAAGGGCTGAAGGAGGTACCCTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR TCA 90 bp GAGACGATGCGGAATTACTTGGCATCTACTCAAGAGCCCAGGCGAAGGCTACTCACTGGTCCTCATTTGTaGGCCAGTAGGCAGGGAGCG +
Preference number: 4 (lower is better)
Translates to: ETMRNYLASTQEPRRRLLTGPHL*ASRQGA
Trigger: CGCTCCCTGCCTACTGGCTCACAAATGAGGACCAGT...GAGTAGCCTTCGCCTGGGCTCTTGAGTAGATGCCAAGTAATTCCGCATCGTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324685.11
CDS-3UTR GCA 90 bp GTCCAGGGAACTCCACAGGACAGAAGCCCTGCCGAGGTTAGGGGGATGGTGGGTTTGTTCCAGCCGCTCTaGCAGTTTCTTGTTCTTGAA +
Preference number: 4 (lower is better)
Translates to: VQGTPQDRSPAEVRGMVGLFQPL*QFLVLE
Trigger: TTCAAGAACAAGAAACTGGCAGAGCGGCTGGAACAA...ACCCACCATCCCCCTAACCTCGGCAGGGCTTCTGTCCTGTGGAGTTCCCTGGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR GCA 90 bp AGCACCTGCAAGATGAGGAAGGTGACTGCAGCAACCTTAGAGCTTCCCAAAGGAGCTGCTGGCACCCAGTaGCACCACAAAAGCCAAGGC +
Preference number: 4 (lower is better)
Translates to: STCKMRKVTAATLELPKGAAGTQ*HHKSQG
Trigger: GCCTTGGCTTTTGTGGTGGCACTGGGTGCCAGCAGC...TCCTTTGGGAAGCTCTAAGGTTGCTGCAGTCACCTTCCTCATCTTGCAGGTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR GCA 90 bp CAAGATGAGGAAGGTGACTGCAGCAACCTTAGAGCTTCCCAAAGGAAGCAAGTGCAGCTCTCGGGTGTGTaGCTGAGCCGCCTCACTGAG +
Preference number: 4 (lower is better)
Translates to: QDEEGDCSNLRASQRKQVQLSGV*LSRLTE
Trigger: CTCAGTGAGGCGGCTCAGGCACACACCCGAGAGCTG...CACTTGCTTCCTTTGGGAAGCTCTAAGGTTGCTGCAGTCACCTTCCTCATCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR GCA 90 bp CAAGGACATGGCTCACTGGTCCTCATTTGTGAGCCAGTAGGCAGGGAGCGAGCCTTCTCGATGTCCCACTaGAAGTCCTCCACTGTTGTC +
Preference number: 4 (lower is better)
Translates to: QGHGSLVLICEPVGRERAFSMSH*KSSTVV
Trigger: GACAACAGTGGAGGACTTGCAGTGGGACATCGAGAA...GGCTCGCTCCCTGCCTACTGGCTCACAAATGAGGACCAGTGAGCCATGTCCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR GCA 90 bp GAGGGTACCTCCTTCAGCCCTTGGCACAAGAGCCAGACCAAGGTGTCCAGGGAATTCTCGATGTCCCACTaGAAGTCCTCCACTGTTGTC +
Preference number: 4 (lower is better)
Translates to: EGTSFSPWHKSQTKVSREFSMSH*KSSTVV
Trigger: GACAACAGTGGAGGACTTGCAGTGGGACATCGAGAA...TTCCCTGGACACCTTGGTCTGGCTCTTGTGCCAAGGGCTGAAGGAGGTACCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR GCA 90 bp ACAGCCTATACAAGCATCTCTAGAACAGAGGCTGTGGGTCCAAACGGGTCCCTGGGCCTTCTTGAGCTCTaGTCGGAGACCCTTGAGGAG +
Preference number: 4 (lower is better)
Translates to: TAYTSISRTEAVGPNGSLGLLEL*SETLEE
Trigger: CTCCTCAAGGGTCTCCGAGCAGAGCTCAAGAAGGCC...CAGGGACCCGTTTGGACCCACAGCCTCTGTTCTAGAGATGCTTGTATAGGCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR GCA 90 bp ACAGCCTATACAAGCATCTCTAGAACAGAGGCTGTGGGTCCAAACGGGTCCCTGTGCACCTTATCCCGCTaGTCCTTGGGCGCTGACTTG +
Preference number: 4 (lower is better)
Translates to: TAYTSISRTEAVGPNGSLCTLSR*SLGADL
Trigger: CAAGTCAGCGCCCAAGGAGCAGCGGGATAAGGTGCA...CAGGGACCCGTTTGGACCCACAGCCTCTGTTCTAGAGATGCTTGTATAGGCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR GCA 90 bp TGTTGGTTCAGCACCTGCAAGATGAGGAAGGTGACTGCAGCAACCTTAGAGCTTCCTCTGCCTGCCGAATaGGCCGCAGGGCATCCTCAT +
Preference number: 4 (lower is better)
Translates to: CWFSTCKMRKVTAATLELPLPAE*AAGHPH
Trigger: ATGAGGATGCCCTGCGGCGCATTCGGCAGGCAGAGG...AAGCTCTAAGGTTGCTGCAGTCACCTTCCTCATCTTGCAGGTGCTGAACCAACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR GCA 90 bp TTAAGTCTGAGCCCTCCCAGGCTCACACCAAGCCAGCAAAGTGCTGCTCAGCTGTGCAGGTGTTCTATCTaGTCCTCTGCCTGCCGAATG +
Preference number: 4 (lower is better)
Translates to: LSLSPPRLTPSQQSAAQLCRCSI*SSACRM
Trigger: CATTCGGCAGGCAGAGGAGCAGATAGAACACCTGCA...CAGCTGAGCAGCACTTTGCTGGCTTGGTGTGAGCCTGGGAGGGCTCAGACTTAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324685.11
CDS-3UTR GCA 90 bp ACAGCCTATACAAGCATCTCTAGAACAGAGGCTGTGGGTCCAAACGGGTCCCTGGCACCCAGCTTGCGCTaGAGGTGTTCTATCTGCTCC +
Preference number: 4 (lower is better)
Translates to: TAYTSISRTEAVGPNGSLAPSLR*RCSICS
Trigger: GGAGCAGATAGAACACCTGCAGCGCAAGCTGGGTGC...CAGGGACCCGTTTGGACCCACAGCCTCTGTTCTAGAGATGCTTGTATAGGCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR GCA 90 bp TTAGGATGCATCCACGGAGACAGACAGGTTAGGGCCAGTTTCCGGGAAGCTCAGTGGTGGCACCCAGCTTaGGCTGCAGGTGTTCTATCT +
Preference number: 4 (lower is better)
Translates to: LGCIHGDRQVRASFREAQWWHPA*AAGVLS
Trigger: AGATAGAACACCTGCAGCGCAAGCTGGGTGCCACCA...CTGAGCTTCCCGGAAACTGGCCCTAACCTGTCTGTCTCCGTGGATGCATCCTAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR GCA 90 bp TCCACTGTAGTTAAGGCCACCAGGATGAAAGCAGGGTTAGGTCCAGGGACCCAGTCTGCTTTTCCAGCTTaGGCCGCAGCCGTGAGATGT +
Preference number: 4 (lower is better)
Translates to: STVVKATRMKAGLGPGTQSAFPA*AAAVRC
Trigger: ACATCTCACGGCTGCGGCGCAAGCTGGAAAAGCAGA...CTGGGTCCCTGGACCTAACCCTGCTTTCATCCTGGTGGCCTTAACTACAGTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR GCA 90 bp ACAGCCTATACAAGCATCTCTAGAACAGAGGCTGTGGGTCCAAACGGGTCCCTGACCTCCACCTTCCTCTaGTTTTCCAGCTTGCGCCGC +
Preference number: 4 (lower is better)
Translates to: TAYTSISRTEAVGPNGSLTSTFL*FSSLRR
Trigger: GCGGCGCAAGCTGGAAAAGCAGAGGAAGGTGGAGGT...CAGGGACCCGTTTGGACCCACAGCCTCTGTTCTAGAGATGCTTGTATAGGCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR GCA 90 bp ACAGCCTATACAAGCATCTCTAGAACAGAGGCTGTGGGTCCAAACGGGTCCCTGGGAAGCTCAGTCAAGTaGTCTGGGCTCCTCAGGCCT +
Preference number: 4 (lower is better)
Translates to: TAYTSISRTEAVGPNGSLGSSVK*SGLLRP
Trigger: AGGCCTGAGGAGCCCAGAGCACTTGACTGAGCTTCC...CAGGGACCCGTTTGGACCCACAGCCTCTGTTCTAGAGATGCTTGTATAGGCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
ENST00000602784.1
CDS-3UTR GCA 90 bp TCCACTGTAGTTAAGGCCACCAGGATGAAAGCAGGGTTAGGTCCAGGGACCCAGAGTGATGCCCCCATCTaGCAAGAGGGTACCTCCTTC +
Preference number: 4 (lower is better)
Translates to: STVVKATRMKAGLGPGTQSDAPI*QEGTSF
Trigger: GAAGGAGGTACCCTCTTGGCAGATGGGGGCATCACT...CTGGGTCCCTGGACCTAACCCTGCTTTCATCCTGGTGGCCTTAACTACAGTGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
ENST00000602784.1
CDS-3UTR GCA 90 bp GGGTGGCCTTTAGCGCAGATATCTAGAGAGACGATGCGGAATTACTTGGCATCTCTACACTTCCCAGGATaGAGCCCGAGGAGTCCCGGC +
Preference number: 4 (lower is better)
Translates to: GWPLAQISRETMRNYLASLHFPG*SPRSPG
Trigger: GCCGGGACTCCTCGGGCTGCATCCTGGGAAGTGTAG...AGATGCCAAGTAATTCCGCATCGTCTCTCTAGATATCTGCGCTAAAGGCCACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324685.11
CDS-3UTR GCA 90 bp TTGGGAAGGGGCCTGATTAGAATAGAAACTGATGATGTTGGTTCAGCACCTGCACCACCCTCGCACCGCTaGCCCAGGCCATCGGCACTT +
Preference number: 4 (lower is better)
Translates to: LGRGLIRIETDDVGSAPAPPSHR*PRPSAL
Trigger: AAGTGCCGATGGCCTGGGGCAGCGGTGCGAGGGTGG...TGCAGGTGCTGAACCAACATCATCAGTTTCTATTCTAATCAGGCCCCTTCCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324685.11
CDS-3UTR CCA 90 bp GGCCTGGCTACTCTGGCTGCAGGCCGAGGGTTGAACGTTTATTCATCACAATTATCCCCCTGGCTCTCATaGCATCGGAGAAGGGCTTCC +
Preference number: 4 (lower is better)
Translates to: GLATLAAGRGLNVYSSQLSPWLS*HRRRAS
Trigger: GGAAGCCCTTCTCCGATGCCATGAGAGCCAGGGGGA...TAATTGTGATGAATAAACGTTCAACCCTCGGCCTGCAGCCAGAGTAGCCAGGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000324685.11
ENST00000357890.9
CDS-3UTR CCA 90 bp CACCTGCAAGATGAGGAAGGTGACTGCAGCAACCTTAGAGCTTCCCAAAGGAAGCCTCCTCACTGCTGCTaGCACCCAGTGCCACCACAA +
Preference number: 4 (lower is better)
Translates to: HLQDEEGDCSNLRASQRKPPHCC*HPVPPQ
Trigger: TTGTGGTGGCACTGGGTGCCAGCAGCAGTGAGGAGG...CTTCCTTTGGGAAGCTCTAAGGTTGCTGCAGTCACCTTCCTCATCTTGCAGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR CCA 90 bp TTTTCCTTAGGGTTAGGATGCATCCACGGAGACAGACAGGTTAGGGCCAGTTTCGCCCCGCCTGCTCGTTaGCCGCCAGATTCTGCTCAA +
Preference number: 4 (lower is better)
Translates to: FSLGLGCIHGDRQVRASFAPPAR*PPDSAQ
Trigger: TTGAGCAGAATCTGGCGGCCAACGAGCAGGCGGGGC...GAAACTGGCCCTAACCTGTCTGTCTCCGTGGATGCATCCTAACCCTAAGGAAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR CCA 90 bp CACCTGCAAGATGAGGAAGGTGACTGCAGCAACCTTAGAGCTTCCCAAAGGAAGAGCTGGGCATCCACCTaGGACTTGAGGCCAAGGACC +
Preference number: 4 (lower is better)
Translates to: HLQDEEGDCSNLRASQRKSWAST*DLRPRT
Trigger: GGTCCTTGGCCTCAAGTCCCAGGTGGATGCCCAGCT...CTTCCTTTGGGAAGCTCTAAGGTTGCTGCAGTCACCTTCCTCATCTTGCAGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR CCA 90 bp AGCACCTGCAAGATGAGGAAGGTGACTGCAGCAACCTTAGAGCTTCCCAAAGGAAGCTGGGCATCCACCTaGGACTTGAGGCCAAGGACC +
Preference number: 4 (lower is better)
Translates to: STCKMRKVTAATLELPKGSWAST*DLRPRT
Trigger: GGTCCTTGGCCTCAAGTCCCAGGTGGATGCCCAGCT...TCCTTTGGGAAGCTCTAAGGTTGCTGCAGTCACCTTCCTCATCTTGCAGGTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR CCA 90 bp TGTTGGTTCAGCACCTGCAAGATGAGGAAGGTGACTGCAGCAACCTTAGAGCTTTTGAGCTCCAGGGCTTaGCTGCGCAGCGTCAGCTCC +
Preference number: 4 (lower is better)
Translates to: CWFSTCKMRKVTAATLELLSSRA*LRSVSS
Trigger: GGAGCTGACGCTGCGCAGCCAAGCCCTGGAGCTCAA...AAGCTCTAAGGTTGCTGCAGTCACCTTCCTCATCTTGCAGGTGCTGAACCAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR CCA 90 bp ATGTTGGTTCAGCACCTGCAAGATGAGGAAGGTGACTGCAGCAACCTTAGAGCTAGGTCCTCGGCCAGCTaGGCGGCTTCTACAGCCTTC +
Preference number: 4 (lower is better)
Translates to: MLVQHLQDEEGDCSNLRARSSAS*AASTAF
Trigger: GAAGGCTGTAGAAGCCGCCCAGCTGGCCGAGGACCT...AGCTCTAAGGTTGCTGCAGTCACCTTCCTCATCTTGCAGGTGCTGAACCAACAT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR CCA 90 bp TGTTGGTTCAGCACCTGCAAGATGAGGAAGGTGACTGCAGCAACCTTAGAGCTTAGGTCCTCGGCCAGCTaGGCGGCTTCTACAGCCTTC +
Preference number: 4 (lower is better)
Translates to: CWFSTCKMRKVTAATLELRSSAS*AASTAF
Trigger: GAAGGCTGTAGAAGCCGCCCAGCTGGCCGAGGACCT...AAGCTCTAAGGTTGCTGCAGTCACCTTCCTCATCTTGCAGGTGCTGAACCAACA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR CCA 90 bp CAATTAACAGCCTATACAAGCATCTCTAGAACAGAGGCTGTGGGTCCAAACGGGTCTGCCAGGCAGGGCTaGATCTCCCGCAGCCGAGTC +
Preference number: 4 (lower is better)
Translates to: QLTAYTSISRTEAVGPNGSARQG*ISRSRV
Trigger: GACTCGGCTGCGGGAGATCCAGCCCTGCCTGGCAGA...CCCGTTTGGACCCACAGCCTCTGTTCTAGAGATGCTTGTATAGGCTGTTAATTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR CCA 90 bp GAGGGTACCTCCTTCAGCCCTTGGCACAAGAGCCAGACCAAGGTGTCCAGGGAATCCTTGATCTCCTCCTaGAGGATTTCGTCGGCATCT +
Preference number: 4 (lower is better)
Translates to: EGTSFSPWHKSQTKVSRESLISS*RISSAS
Trigger: AGATGCCGACGAAATCCTCCAGGAGGAGATCAAGGA...TTCCCTGGACACCTTGGTCTGGCTCTTGTGCCAAGGGCTGAAGGAGGTACCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR CCA 90 bp GGCCTGGCTACTCTGGCTGCAGGCCGAGGGTTGAACGTTTATTCATCACAATTACCCAAACCAACTAGATaGGCAGGGGCTGGGCCCATG +
Preference number: 4 (lower is better)
Translates to: GLATLAAGRGLNVYSSQLPKPTR*AGAGPM
Trigger: CATGGGCCCAGCCCCTGCCCATCTAGTTGGTTTGGG...TAATTGTGATGAATAAACGTTCAACCCTCGGCCTGCAGCCAGAGTAGCCAGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324685.11
ENST00000357890.9
CDS-3UTR CCA 90 bp CACCTGCAAGATGAGGAAGGTGACTGCAGCAACCTTAGAGCTTCCCAAAGGAAGCCCAAACCAACTAGATaGGCAGGGGCTGGGCCCATG +
Preference number: 4 (lower is better)
Translates to: HLQDEEGDCSNLRASQRKPKPTR*AGAGPM
Trigger: CATGGGCCCAGCCCCTGCCCATCTAGTTGGTTTGGG...CTTCCTTTGGGAAGCTCTAAGGTTGCTGCAGTCACCTTCCTCATCTTGCAGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR CCA 90 bp CAAGGACATGGCTCACTGGTCCTCATTTGTGAGCCAGTAGGCAGGGAGCGAGCCAGGTTAGGGGGATGGTaGGTGAAGGAAAGTCTTCCT +
Preference number: 4 (lower is better)
Translates to: QGHGSLVLICEPVGRERARLGGW*VKESLP
Trigger: AGGAAGACTTTCCTTCACCCACCATCCCCCTAACCT...GGCTCGCTCCCTGCCTACTGGCTCACAAATGAGGACCAGTGAGCCATGTCCTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
ENST00000602784.1
CDS-3UTR CCA 90 bp CCTCCTTCAGCCCTTGGCACAAGAGCCAGACCAAGGTGTCCAGGGAACTCCACAAGGTTAGGGGGATGGTaGGTGAAGGAAAGTCTTCCT +
Preference number: 4 (lower is better)
Translates to: PPSALGTRARPRCPGNSTRLGGW*VKESLP
Trigger: AGGAAGACTTTCCTTCACCCACCATCCCCCTAACCT...TGTGGAGTTCCCTGGACACCTTGGTCTGGCTCTTGTGCCAAGGGCTGAAGGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
ENST00000602784.1
CDS-3UTR CCA 90 bp GCCAAGAGGGTACCTCCTTCAGCCCTTGGCACAAGAGCCAGACCAAGGTGTCCAAGGTTAGGGGGATGGTaGGTGAAGGAAAGTCTTCCT +
Preference number: 4 (lower is better)
Translates to: AKRVPPSALGTRARPRCPRLGGW*VKESLP
Trigger: AGGAAGACTTTCCTTCACCCACCATCCCCCTAACCT...TGGACACCTTGGTCTGGCTCTTGTGCCAAGGGCTGAAGGAGGTACCCTCTTGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
ENST00000602784.1
CDS-3UTR CCA 90 bp GCAGGCAGACAGGACACAGGCTCAGTCACAGGGTGTCAGGGGGAAGCTCTTCTAGGGGGTAAATGGGCTTaGCAGAGAAATGGAGATTGG +
Preference number: 4 (lower is better)
Translates to: AGRQDTGSVTGCQGEALLGGKWA*QRNGDW
Trigger: CCAATCTCCATTTCTCTGCCAAGCCCATTTACCCCC...TAGAAGAGCTTCCCCCTGACACCCTGTGACTGAGCCTGTGTCCTGTCTGCCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
ENST00000602784.1
CDS-3UTR CCA 90 bp GACAGACAGGTTAGGGCCAGTTTCCGGGAAGCTCAGTCAAGTGCTCTGGGCTCCGGGGGTAAATGGGCTTaGCAGAGAAATGGAGATTGG +
Preference number: 4 (lower is better)
Translates to: DRQVRASFREAQSSALGSGGKWA*QRNGDW
Trigger: CCAATCTCCATTTCTCTGCCAAGCCCATTTACCCCC...GGAGCCCAGAGCACTTGACTGAGCTTCCCGGAAACTGGCCCTAACCTGTCTGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
ENST00000602784.1
CDS-3UTR CCA 90 bp ACAGCCTATACAAGCATCTCTAGAACAGAGGCTGTGGGTCCAAACGGGTCCCTGTGTCCCTTCCCCTCCTaGGAAGTTCCACCTCCACTG +
Preference number: 4 (lower is better)
Translates to: TAYTSISRTEAVGPNGSLCPFPS*EVPPPL
Trigger: CAGTGGAGGTGGAACTTCCCAGGAGGGGAAGGGACA...CAGGGACCCGTTTGGACCCACAGCCTCTGTTCTAGAGATGCTTGTATAGGCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
ENST00000602784.1
CDS-3UTR CCA 90 bp GCATCCACGGAGACAGACAGGTTAGGGCCAGTTTCCGGGAAGCTCAGTCAAGTGTCTAGCTGGAATGATTaGAAGTTGGCCCAGCGGCTG +
Preference number: 4 (lower is better)
Translates to: ASTETDRLGPVSGKLSQVSSWND*KLAQRL
Trigger: CAGCCGCTGGGCCAACTTCCAATCATTCCAGCTAGA...CACTTGACTGAGCTTCCCGGAAACTGGCCCTAACCTGTCTGTCTCCGTGGATGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
ENST00000602784.1
CDS-3UTR CCA 90 bp TTGGGAAGGGGCCTGATTAGAATAGAAACTGATGATGTTGGTTCAGCACCTGCAGCAGCTCCAACCCTCTaGCCTCTCCGGGCACTGCCC +
Preference number: 4 (lower is better)
Translates to: LGRGLIRIETDDVGSAPAAAPTL*PLRALP
Trigger: GGGCAGTGCCCGGAGAGGCCAGAGGGTTGGAGCTGC...TGCAGGTGCTGAACCAACATCATCAGTTTCTATTCTAATCAGGCCCCTTCCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
ENST00000602784.1
CDS-3UTR CCA 90 bp CCTTTAGCGCAGATATCTAGAGAGACGATGCGGAATTACTTGGCATCTACTCAACGCCCGAGGTCACCGTaGCGGCCCGCGTCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: PLAQISRETMRNYLASTQRPRSP*RPASPS
Trigger: AGAAGGAGACGCGGGCCGCCACGGTGACCTCGGGCG...TTGAGTAGATGCCAAGTAATTCCGCATCGTCTCTCTAGATATCTGCGCTAAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324685.11
CDS-3UTR TCA 90 bp TTGGGAAGGGGCCTGATTAGAATAGAAACTGATGATGTTGGTTCAGCACCTGCACTGGGGCTGGGGCACTaGCGCCAGAATCCTCTGGGT +
Preference number: 4 (lower is better)
Translates to: LGRGLIRIETDDVGSAPALGLGH*RQNPLG
Trigger: ACCCAGAGGATTCTGGCGTCAGTGCCCCAGCCCCAG...TGCAGGTGCTGAACCAACATCATCAGTTTCTATTCTAATCAGGCCCCTTCCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR TCA 90 bp TCCCTTCCCCTCCTGGGAAGTTCCACCTCCACTGTAGTTAAGGCCACCAGGATGCCTAGGCTGCAGCTCTaGCCTTTAGGAAAAGATGGA +
Preference number: 4 (lower is better)
Translates to: SLPLLGSSTSTVVKATRMPRLQL*PLGKDG
Trigger: TCCATCTTTTCCTAAAGGTCAGAGCTGCAGCCTAGG...CATCCTGGTGGCCTTAACTACAGTGGAGGTGGAACTTCCCAGGAGGGGAAGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR GCA 90 bp ACAAGCATCTCTAGAACAGAGGCTGTGGGTCCAAACGGGTCCCTGCAGCTCCAATCATCTTCACAAGCCTaGCGTTGTTCCAGCCGCTCT +
Preference number: 4 (lower is better)
Translates to: TSISRTEAVGPNGSLQLQSSSQA*RCSSRS
Trigger: AGAGCGGCTGGAACAACGGCAGGCTTGTGAAGATGA...TTGGAGCTGCAGGGACCCGTTTGGACCCACAGCCTCTGTTCTAGAGATGCTTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR GCA 90 bp CAAGGACATGGCTCACTGGTCCTCATTTGTGAGCCAGTAGGCAGGGAGCGAGCCTGCTTATTGAGCTTTTaGTCTCGCTTCCGCAGCTTC +
Preference number: 4 (lower is better)
Translates to: QGHGSLVLICEPVGRERACLLSF*SRFRSF
Trigger: GAAGCTGCGGAAGCGAGAGCAAAAGCTCAATAAGCA...GGCTCGCTCCCTGCCTACTGGCTCACAAATGAGGACCAGTGAGCCATGTCCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR GCA 90 bp CAAGGACATGGCTCACTGGTCCTCATTTGTGAGCCAGTAGGCAGGGAGCGAGCCAAGGCCTCTGCCAGGTaGTTATTGAGCTTTTGCTCT +
Preference number: 4 (lower is better)
Translates to: QGHGSLVLICEPVGRERAKASAR*LLSFCS
Trigger: AGAGCAAAAGCTCAATAAGCACCTGGCAGAGGCCTT...GGCTCGCTCCCTGCCTACTGGCTCACAAATGAGGACCAGTGAGCCATGTCCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR GCA 90 bp CACCTGCAAGATGAGGAAGGTGACTGCAGCAACCTTAGAGCTTCCCAAAGGAAGAGTGAGAATTGGGCCTaGAGCATGCGGTACTCCCCC +
Preference number: 4 (lower is better)
Translates to: HLQDEEGDCSNLRASQRKSENWA*SMRYSP
Trigger: GGGGGAGTACCGCATGCTGCAGGCCCAATTCTCACT...CTTCCTTTGGGAAGCTCTAAGGTTGCTGCAGTCACCTTCCTCATCTTGCAGGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324685.11
ENST00000563683.5
CDS-3UTR GCA 90 bp TGTTGGTTCAGCACCTGCAAGATGAGGAAGGTGACTGCAGCAACCTTAGAGCTTGTGCGTAGCTTCTTCTaGAGCCCCAGCTCGTCGCTC +
Preference number: 4 (lower is better)
Translates to: CWFSTCKMRKVTAATLELVRSFF*SPSSSL
Trigger: GAGCGACGAGCTGGGGCTGCAGAAGAAGCTACGCAC...AAGCTCTAAGGTTGCTGCAGTCACCTTCCTCATCTTGCAGGTGCTGAACCAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR GCA 90 bp TTTTCCTTAGGGTTAGGATGCATCCACGGAGACAGACAGGTTAGGGCCAGTTTCGTGCGTAGCTTCTTCTaGAGCCCCAGCTCGTCGCTC +
Preference number: 4 (lower is better)
Translates to: FSLGLGCIHGDRQVRASFVRSFF*SPSSSL
Trigger: GAGCGACGAGCTGGGGCTGCAGAAGAAGCTACGCAC...GAAACTGGCCCTAACCTGTCTGTCTCCGTGGATGCATCCTAACCCTAAGGAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR GCA 90 bp GAGGGTACCTCCTTCAGCCCTTGGCACAAGAGCCAGACCAAGGTGTCCAGGGAATCTGCTCAAACTCGATaGGCAGCATCTCATACTCCT +
Preference number: 4 (lower is better)
Translates to: EGTSFSPWHKSQTKVSRESAQTR*AASHTP
Trigger: AGGAGTATGAGATGCTGCGCATCGAGTTTGAGCAGA...TTCCCTGGACACCTTGGTCTGGCTCTTGTGCCAAGGGCTGAAGGAGGTACCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR GCA 90 bp CAAGGACATGGCTCACTGGTCCTCATTTGTGAGCCAGTAGGCAGGGAGCGAGCCTCTGCTCAAACTCGATaGGCAGCATCTCATACTCCT +
Preference number: 4 (lower is better)
Translates to: QGHGSLVLICEPVGRERASAQTR*AASHTP
Trigger: AGGAGTATGAGATGCTGCGCATCGAGTTTGAGCAGA...GGCTCGCTCCCTGCCTACTGGCTCACAAATGAGGACCAGTGAGCCATGTCCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR GCA 90 bp AACAAGGAACAAGGACATGGCTCACTGGTCCTCATTTGTGAGCCAGTAGGCAGGCCTCCAATTCCCGGATaGGGCTCCGCAGCTCATCAA +
Preference number: 4 (lower is better)
Translates to: NKEQGHGSLVLICEPVGRPPIPG*GSAAHQ
Trigger: TTGATGAGCTGCGGAGCCGCATCCGGGAATTGGAGG...CCTGCCTACTGGCTCACAAATGAGGACCAGTGAGCCATGTCCTTGTTCCTTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR GCA 90 bp ACAAGCATCTCTAGAACAGAGGCTGTGGGTCCAAACGGGTCCCTGCAGCTCCAACATCCGCGATCTTCTTaGTCTCCCTTCGATCCCTCT +
Preference number: 4 (lower is better)
Translates to: TSISRTEAVGPNGSLQLQHPRSS*SPFDPS
Trigger: AGAGGGATCGAAGGGAGAGCAAGAAGATCGCGGATG...TTGGAGCTGCAGGGACCCGTTTGGACCCACAGCCTCTGTTCTAGAGATGCTTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR GCA 90 bp TTAGGATGCATCCACGGAGACAGACAGGTTAGGGCCAGTTTCCGGGAAGCTCAGTGCAGGTGTTCTATCTaGTCCTCTGCCTGCCGAATG +
Preference number: 4 (lower is better)
Translates to: LGCIHGDRQVRASFREAQCRCSI*SSACRM
Trigger: CATTCGGCAGGCAGAGGAGCAGATAGAACACCTGCA...CTGAGCTTCCCGGAAACTGGCCCTAACCTGTCTGTCTCCGTGGATGCATCCTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR GCA 90 bp GGCCTGGCTACTCTGGCTGCAGGCCGAGGGTTGAACGTTTATTCATCACAATTATCCTTTTCCCGCAACTaGTGTAGCAGCCGCCCGTTC +
Preference number: 4 (lower is better)
Translates to: GLATLAAGRGLNVYSSQLSFSRN*CSSRPF
Trigger: GAACGGGCGGCTGCTACAGCAGTTGCGGGAAAAGGA...TAATTGTGATGAATAAACGTTCAACCCTCGGCCTGCAGCCAGAGTAGCCAGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324685.11
ENST00000357890.9
CDS-3UTR GCA 90 bp AGCACCTGCAAGATGAGGAAGGTGACTGCAGCAACCTTAGAGCTTCCCAAAGGATCCTTTTCCCGCAACTaGTGTAGCAGCCGCCCGTTC +
Preference number: 4 (lower is better)
Translates to: STCKMRKVTAATLELPKGSFSRN*CSSRPF
Trigger: GAACGGGCGGCTGCTACAGCAGTTGCGGGAAAAGGA...TCCTTTGGGAAGCTCTAAGGTTGCTGCAGTCACCTTCCTCATCTTGCAGGTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR GCA 90 bp ATGTTGGTTCAGCACCTGCAAGATGAGGAAGGTGACTGCAGCAACCTTAGAGCTAGCCGAGTCTGCACGTaGTCCAGCTGCACCTTCAGG +
Preference number: 4 (lower is better)
Translates to: MLVQHLQDEEGDCSNLRASRVCT*SSCTFR
Trigger: CCTGAAGGTGCAGCTGGAGCACGTGCAGACTCGGCT...AGCTCTAAGGTTGCTGCAGTCACCTTCCTCATCTTGCAGGTGCTGAACCAACAT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR GCA 90 bp GGGTGGCCTTTAGCGCAGATATCTAGAGAGACGATGCGGAATTACTTGGCATCTGGACTACATTTGGGGTaGGCGGCCTGGCTACTCTGG +
Preference number: 4 (lower is better)
Translates to: GWPLAQISRETMRNYLASGLHLG*AAWLLW
Trigger: CCAGAGTAGCCAGGCCGCGCACCCCAAATGTAGTCC...AGATGCCAAGTAATTCCGCATCGTCTCTCTAGATATCTGCGCTAAAGGCCACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324685.11
CDS-3UTR GCA 90 bp TCTAGAGAGACGATGCGGAATTACTTGGCATCTACTCAAGAGCCCAGGCGAAGGAGGTGTCCCGATCTGTaGATTCGAGTGGTGTGGGGG +
Preference number: 4 (lower is better)
Translates to: SRETMRNYLASTQEPRRRRCPDL*IRVVWG
Trigger: CCCCCACACCACTCGAATGCACAGATCGGGACACCT...CCTTCGCCTGGGCTCTTGAGTAGATGCCAAGTAATTCCGCATCGTCTCTCTAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324685.11
CDS-3UTR CCA 90 bp TTTTCCTTAGGGTTAGGATGCATCCACGGAGACAGACAGGTTAGGGCCAGTTTCAGTCCCATCACATGTTaGCCCCTCCTGGGTCCCAGG +
Preference number: 4 (lower is better)
Translates to: FSLGLGCIHGDRQVRASFSPITC*PLLGPR
Trigger: CCTGGGACCCAGGAGGGGCCAACATGTGATGGGACT...GAAACTGGCCCTAACCTGTCTGTCTCCGTGGATGCATCCTAACCCTAAGGAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR CCA 90 bp CAAGATGAGGAAGGTGACTGCAGCAACCTTAGAGCTTCCCAAAGGAAGCAAGTGTACTCCTTGCGTACCTaGGCCAGCGTGTCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: QDEEGDCSNLRASQRKQVYSLRT*ASVSSS
Trigger: GCTGGAGGACACGCTGGCCCAGGTACGCAAGGAGTA...CACTTGCTTCCTTTGGGAAGCTCTAAGGTTGCTGCAGTCACCTTCCTCATCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR CCA 90 bp GACAGACAGGTTAGGGCCAGTTTCCGGGAAGCTCAGTCAAGTGCTCTGGGCTCCAGACTACTAATCAGGTaGCGCATCTCACGGTTGATG +
Preference number: 4 (lower is better)
Translates to: DRQVRASFREAQSSALGSRLLIR*RISRLM
Trigger: CATCAACCGTGAGATGCGCCACCTGATTAGTAGTCT...GGAGCCCAGAGCACTTGACTGAGCTTCCCGGAAACTGGCCCTAACCTGTCTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR CCA 90 bp GCCAAGAGGGTACCTCCTTCAGCCCTTGGCACAAGAGCCAGACCAAGGTGTCCAAGACTACTAATCAGGTaGCGCATCTCACGGTTGATG +
Preference number: 4 (lower is better)
Translates to: AKRVPPSALGTRARPRCPRLLIR*RISRLM
Trigger: CATCAACCGTGAGATGCGCCACCTGATTAGTAGTCT...TGGACACCTTGGTCTGGCTCTTGTGCCAAGGGCTGAAGGAGGTACCCTCTTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR CCA 90 bp ACAGCCTATACAAGCATCTCTAGAACAGAGGCTGTGGGTCCAAACGGGTCCCTGTCCTTCTGGCTCTCCTaGGCCTTCTTGAGCTCTGCT +
Preference number: 4 (lower is better)
Translates to: TAYTSISRTEAVGPNGSLSFWLS*AFLSSA
Trigger: AGCAGAGCTCAAGAAGGCCCAGGAGAGCCAGAAGGA...CAGGGACCCGTTTGGACCCACAGCCTCTGTTCTAGAGATGCTTGTATAGGCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR CCA 90 bp TGGTTCAGCACCTGCAAGATGAGGAAGGTGACTGCAGCAACCTTAGAGCTTCCCTCCTTCTGGCTCTCCTaGGCCTTCTTGAGCTCTGCT +
Preference number: 4 (lower is better)
Translates to: WFSTCKMRKVTAATLELPSFWLS*AFLSSA
Trigger: AGCAGAGCTCAAGAAGGCCCAGGAGAGCCAGAAGGA...GGGAAGCTCTAAGGTTGCTGCAGTCACCTTCCTCATCTTGCAGGTGCTGAACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR CCA 90 bp GTTAAGTCTGAGCCCTCCCAGGCTCACACCAAGCCAGCAAAGTGCTGCTCAGCTTATCCCGCTGCTCCTTaGGCGCTGACTTGTACATAT +
Preference number: 4 (lower is better)
Translates to: VKSEPSQAHTKPAKCCSAYPAAP*ALTCTY
Trigger: ATATGTACAAGTCAGCGCCCAAGGAGCAGCGGGATA...AGCTGAGCAGCACTTTGCTGGCTTGGTGTGAGCCTGGGAGGGCTCAGACTTAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324685.11
CDS-3UTR CCA 90 bp GCATCCACGGAGACAGACAGGTTAGGGCCAGTTTCCGGGAAGCTCAGTCAAGTGTATCCCGCTGCTCCTTaGGCGCTGACTTGTACATAT +
Preference number: 4 (lower is better)
Translates to: ASTETDRLGPVSGKLSQVYPAAP*ALTCTY
Trigger: ATATGTACAAGTCAGCGCCCAAGGAGCAGCGGGATA...CACTTGACTGAGCTTCCCGGAAACTGGCCCTAACCTGTCTGTCTCCGTGGATGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR CCA 90 bp TTTTCCTTAGGGTTAGGATGCATCCACGGAGACAGACAGGTTAGGGCCAGTTTCAGCTGGGCATCCACCTaGGACTTGAGGCCAAGGACC +
Preference number: 4 (lower is better)
Translates to: FSLGLGCIHGDRQVRASFSWAST*DLRPRT
Trigger: GGTCCTTGGCCTCAAGTCCCAGGTGGATGCCCAGCT...GAAACTGGCCCTAACCTGTCTGTCTCCGTGGATGCATCCTAACCCTAAGGAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR CCA 90 bp TGGTTCAGCACCTGCAAGATGAGGAAGGTGACTGCAGCAACCTTAGAGCTTCCCATACGATGGAAGTCGTaGGCACCAAAGGCCGCGTTG +
Preference number: 4 (lower is better)
Translates to: WFSTCKMRKVTAATLELPIRWKS*APKAAL
Trigger: CAACGCGGCCTTTGGTGCCCACGACTTCCATCGTAT...GGGAAGCTCTAAGGTTGCTGCAGTCACCTTCCTCATCTTGCAGGTGCTGAACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR CCA 90 bp CAATTAACAGCCTATACAAGCATCTCTAGAACAGAGGCTGTGGGTCCAAACGGGCCACTAGACCTGGGGTaGGGAGGAGATGGGGGCACA +
Preference number: 4 (lower is better)
Translates to: QLTAYTSISRTEAVGPNGPLDLG*GGDGGT
Trigger: TGTGCCCCCATCTCCTCCCCACCCCAGGTCTAGTGG...CCCGTTTGGACCCACAGCCTCTGTTCTAGAGATGCTTGTATAGGCTGTTAATTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR CCA 90 bp CAAGGACATGGCTCACTGGTCCTCATTTGTGAGCCAGTAGGCAGGGAGCGAGCCGGAAGCTCTTCTAGCTaGAATGATTGGAAGTTGGCC +
Preference number: 4 (lower is better)
Translates to: QGHGSLVLICEPVGRERAGSSSS*NDWKLA
Trigger: GGCCAACTTCCAATCATTCCAGCTAGAAGAGCTTCC...GGCTCGCTCCCTGCCTACTGGCTCACAAATGAGGACCAGTGAGCCATGTCCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
ENST00000602784.1
CDS-3UTR CCA 90 bp CACCTGCAAGATGAGGAAGGTGACTGCAGCAACCTTAGAGCTTCCCAAAGGAAGCTAGAACAGAGGCTGTaGGTCCAAACGGGTCCCTGC +
Preference number: 4 (lower is better)
Translates to: HLQDEEGDCSNLRASQRKLEQRL*VQTGPC
Trigger: GCAGGGACCCGTTTGGACCCACAGCCTCTGTTCTAG...CTTCCTTTGGGAAGCTCTAAGGTTGCTGCAGTCACCTTCCTCATCTTGCAGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
ENST00000602784.1
CDS-3UTR CCA 90 bp CAATTAACAGCCTATACAAGCATCTCTAGAACAGAGGCTGTGGGTCCAAACGGGGTTCAGGCCGGCCTTTaGCCAGCGCAACCGGGAAAC +
Preference number: 4 (lower is better)
Translates to: QLTAYTSISRTEAVGPNGVQAGL*PAQPGN
Trigger: GTTTCCCGGTTGCGCTGGCCAAAGGCCGGCCTGAAC...CCCGTTTGGACCCACAGCCTCTGTTCTAGAGATGCTTGTATAGGCTGTTAATTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324685.11
CDS-3UTR TCA 90 bp GGCCGAGGGTTGAACGTTTATTCATCACAATTAACAGCCTATACAAGCATCTCTCGATGCAGGGTCCCCTaGGGGGCGTCAAACGGGAGG +
Preference number: 4 (lower is better)
Translates to: GRGLNVYSSQLTAYTSISRCRVP*GASNGR
Trigger: CCTCCCGTTTGACGCCCCTCAGGGGACCCTGCATCG...AGAGATGCTTGTATAGGCTGTTAATTGTGATGAATAAACGTTCAACCCTCGGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324685.11
ENST00000357890.9
CDS-3UTR TCA 90 bp ACAAGCATCTCTAGAACAGAGGCTGTGGGTCCAAACGGGTCCCTGCAGCTCCAAACCCTTGAGGAGTTCTaGTTCCTTCCGCTTGGTTTC +
Preference number: 4 (lower is better)
Translates to: TSISRTEAVGPNGSLQLQTLEEF*FLPLGF
Trigger: GAAACCAAGCGGAAGGAATCAGAACTCCTCAAGGGT...TTGGAGCTGCAGGGACCCGTTTGGACCCACAGCCTCTGTTCTAGAGATGCTTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR TCA 90 bp ATGTTGGTTCAGCACCTGCAAGATGAGGAAGGTGACTGCAGCAACCTTAGAGCTGAGCCTTGGGATGCATaGGGTGGGGGTAAATGGGCT +
Preference number: 4 (lower is better)
Translates to: MLVQHLQDEEGDCSNLRAEPWDA*GGGKWA
Trigger: AGCCCATTTACCCCCACCTCATGCATCCCAAGGCTC...AGCTCTAAGGTTGCTGCAGTCACCTTCCTCATCTTGCAGGTGCTGAACCAACAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
ENST00000602784.1
CDS-3UTR GCA 90 bp CAAGATGAGGAAGGTGACTGCAGCAACCTTAGAGCTTCCCAAAGGAAGCAAGTGAACTCCATTCGGCCTTaGAGCTCCAGCTCCACCTCC +
Preference number: 4 (lower is better)
Translates to: QDEEGDCSNLRASQRKQVNSIRP*SSSSTS
Trigger: GGAGGTGGAGCTGGAGCTGCAAGGCCGAATGGAGTT...CACTTGCTTCCTTTGGGAAGCTCTAAGGTTGCTGCAGTCACCTTCCTCATCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR GCA 90 bp TTGGGAAGGGGCCTGATTAGAATAGAAACTGATGATGTTGGTTCAGCACCTGCATTGATGGGCCCCGCCTaGTCGTTGGCCGCCAGATTC +
Preference number: 4 (lower is better)
Translates to: LGRGLIRIETDDVGSAPALMGPA*SLAARF
Trigger: GAATCTGGCGGCCAACGAGCAGGCGGGGCCCATCAA...TGCAGGTGCTGAACCAACATCATCAGTTTCTATTCTAATCAGGCCCCTTCCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR GCA 90 bp TGGTTCAGCACCTGCAAGATGAGGAAGGTGACTGCAGCAACCTTAGAGCTTCCCCATCCGCGATCTTCTTaGTCTCCCTTCGATCCCTCT +
Preference number: 4 (lower is better)
Translates to: WFSTCKMRKVTAATLELPHPRSS*SPFDPS
Trigger: AGAGGGATCGAAGGGAGAGCAAGAAGATCGCGGATG...GGGAAGCTCTAAGGTTGCTGCAGTCACCTTCCTCATCTTGCAGGTGCTGAACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR GCA 90 bp ACAGCCTATACAAGCATCTCTAGAACAGAGGCTGTGGGTCCAAACGGGTCCCTGCATCCGCGATCTTCTTaGTCTCCCTTCGATCCCTCT +
Preference number: 4 (lower is better)
Translates to: TAYTSISRTEAVGPNGSLHPRSS*SPFDPS
Trigger: AGAGGGATCGAAGGGAGAGCAAGAAGATCGCGGATG...CAGGGACCCGTTTGGACCCACAGCCTCTGTTCTAGAGATGCTTGTATAGGCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR GCA 90 bp TGGTTCAGCACCTGCAAGATGAGGAAGGTGACTGCAGCAACCTTAGAGCTTCCCGATTTCGTCGGCATCTaGGTAGACCTCCACCTTCCT +
Preference number: 4 (lower is better)
Translates to: WFSTCKMRKVTAATLELPDFVGI*VDLHLP
Trigger: AGGAAGGTGGAGGTCTACGCAGATGCCGACGAAATC...GGGAAGCTCTAAGGTTGCTGCAGTCACCTTCCTCATCTTGCAGGTGCTGAACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR GCA 90 bp CACCTGCAAGATGAGGAAGGTGACTGCAGCAACCTTAGAGCTTCCCAAAGGAAGTTTTCTGTAGGGCAGTaGCCCCTAGGCTGCAGCTCT +
Preference number: 4 (lower is better)
Translates to: HLQDEEGDCSNLRASQRKFSVGQ*PLGCSS
Trigger: AGAGCTGCAGCCTAGGGGGCACTGCCCTACAGAAAA...CTTCCTTTGGGAAGCTCTAAGGTTGCTGCAGTCACCTTCCTCATCTTGCAGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
ENST00000602784.1
CDS-3UTR GCA 90 bp TTGGGAAGGGGCCTGATTAGAATAGAAACTGATGATGTTGGTTCAGCACCTGCAGTCCAAACGGGTCCCTaGAGCTCCAACCCTCTGGCC +
Preference number: 4 (lower is better)
Translates to: LGRGLIRIETDDVGSAPAVQTGP*SSNPLA
Trigger: GGCCAGAGGGTTGGAGCTGCAGGGACCCGTTTGGAC...TGCAGGTGCTGAACCAACATCATCAGTTTCTATTCTAATCAGGCCCCTTCCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
ENST00000602784.1
CDS-3UTR GCA 90 bp TGGTTCAGCACCTGCAAGATGAGGAAGGTGACTGCAGCAACCTTAGAGCTTCCCAGCTCGTCGCTCTTCTaGATGCTGAGTGTGATCTGG +
Preference number: 4 (lower is better)
Translates to: WFSTCKMRKVTAATLELPSSSLF*MLSVIW
Trigger: CCAGATCACACTCAGCATGCAGAAGAGCGACGAGCT...GGGAAGCTCTAAGGTTGCTGCAGTCACCTTCCTCATCTTGCAGGTGCTGAACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357890.9
CDS-3UTR GCA 90 bp TGTTGGTTCAGCACCTGCAAGATGAGGAAGGTGACTGCAGCAACCTTAGAGCTTCGCAGGGCCACCTTCTaGATGCTGAGTGTGATCTGG +
Preference number: 4 (lower is better)
Translates to: CWFSTCKMRKVTAATLELRRATF*MLSVIW
Trigger: CCAGATCACACTCAGCATGCAGAAGGTGGCCCTGCG...AAGCTCTAAGGTTGCTGCAGTCACCTTCCTCATCTTGCAGGTGCTGAACCAACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563683.5
CDS-3UTR CCA 90 bp AACAAGGAACAAGGACATGGCTCACTGGTCCTCATTTGTGAGCCAGTAGGCAGGGTGTGGCATCATCTGTaGCCTGCCGCTTCTCCAACT +
Preference number: 4 (lower is better)
Translates to: NKEQGHGSLVLICEPVGRVWHHL*PAASPT
Trigger: AGTTGGAGAAGCGGCAGGCCACAGATGATGCCACAC...CCTGCCTACTGGCTCACAAATGAGGACCAGTGAGCCATGTCCTTGTTCCTTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR CCA 90 bp GCAGGCAGACAGGACACAGGCTCAGTCACAGGGTGTCAGGGGGAAGCTCTTCTAGATGTCACTTTATCCTaGAGCTCGGAGTACTCCAAT +
Preference number: 4 (lower is better)
Translates to: AGRQDTGSVTGCQGEALLDVTLS*SSEYSN
Trigger: ATTGGAGTACTCCGAGCTCCAGGATAAAGTGACATC...TAGAAGAGCTTCCCCCTGACACCCTGTGACTGAGCCTGTGTCCTGTCTGCCTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR CCA 90 bp CCTCCTTCAGCCCTTGGCACAAGAGCCAGACCAAGGTGTCCAGGGAACTCCACAGATGTCACTTTATCCTaGAGCTCGGAGTACTCCAAT +
Preference number: 4 (lower is better)
Translates to: PPSALGTRARPRCPGNSTDVTLS*SSEYSN
Trigger: ATTGGAGTACTCCGAGCTCCAGGATAAAGTGACATC...TGTGGAGTTCCCTGGACACCTTGGTCTGGCTCTTGTGCCAAGGGCTGAAGGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR CCA 90 bp AACAAGGAACAAGGACATGGCTCACTGGTCCTCATTTGTGAGCCAGTAGGCAGGCCAGGGGTTATACCCTaGAAGTCCTCTTCAGAGGGG +
Preference number: 4 (lower is better)
Translates to: NKEQGHGSLVLICEPVGRPGVIP*KSSSEG
Trigger: CCCCTCTGAAGAGGACTTCCAGGGTATAACCCCTGG...CCTGCCTACTGGCTCACAAATGAGGACCAGTGAGCCATGTCCTTGTTCCTTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR CCA 90 bp TGCAGGCCGAGGGTTGAACGTTTATTCATCACAATTAACAGCCTATACAAGCATCGGGAGGAAGGGCCCTaGGCCCCAGGGGTTATACCC +
Preference number: 4 (lower is better)
Translates to: CRPRVERLFITINSLYKHREEGP*APGVIP
Trigger: GGGTATAACCCCTGGGGCCCAGGGCCCTTCCTCCCG...ATGCTTGTATAGGCTGTTAATTGTGATGAATAAACGTTCAACCCTCGGCCTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324685.11
ENST00000357890.9
CDS-3UTR CCA 90 bp AAATGGAGATTGGGAAGGGGCCTGATTAGAATAGAAACTGATGATGTTGGTTCAGCTCCCGCTTGGGCCTaGCCTCAGGTTCTCGGCCCC +
Preference number: 4 (lower is better)
Translates to: KWRLGRGLIRIETDDVGSAPAWA*PQVLGP
Trigger: GGGGCCGAGAACCTGAGGCCAGGCCCAAGCGGGAGC...TGAACCAACATCATCAGTTTCTATTCTAATCAGGCCCCTTCCCAATCTCCATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR CCA 90 bp GGCCTGGCTACTCTGGCTGCAGGCCGAGGGTTGAACGTTTATTCATCACAATTATGGTTTCTTCCACCTTaGCCTTCTCCCGATCAGCCC +
Preference number: 4 (lower is better)
Translates to: GLATLAAGRGLNVYSSQLWFLPP*PSPDQP
Trigger: GGGCTGATCGGGAGAAGGCCAAGGTGGAAGAAACCA...TAATTGTGATGAATAAACGTTCAACCCTCGGCCTGCAGCCAGAGTAGCCAGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324685.11
ENST00000357890.9
CDS-3UTR CCA 90 bp TGTTGGTTCAGCACCTGCAAGATGAGGAAGGTGACTGCAGCAACCTTAGAGCTTTGCACAGTCAGCAGCTaGGCATCCACCTGGGACTTG +
Preference number: 4 (lower is better)
Translates to: CWFSTCKMRKVTAATLELCTVSS*ASTWDL
Trigger: CAAGTCCCAGGTGGATGCCCAGCTGCTGACTGTGCA...AAGCTCTAAGGTTGCTGCAGTCACCTTCCTCATCTTGCAGGTGCTGAACCAACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR CCA 90 bp AAGAGGGTACCTCCTTCAGCCCTTGGCACAAGAGCCAGACCAAGGTGTCCAGGGTCGAAGCAGAAAACGTaGAAGCACTTGGTAAGGACT +
Preference number: 4 (lower is better)
Translates to: KRVPPSALGTRARPRCPGSKQKT*KHLVRT
Trigger: AGTCCTTACCAAGTGCTTCCACGTTTTCTGCTTCGA...CCCTGGACACCTTGGTCTGGCTCTTGTGCCAAGGGCTGAAGGAGGTACCCTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR CCA 90 bp TTGGGAAGGGGCCTGATTAGAATAGAAACTGATGATGTTGGTTCAGCACCTGCACCATGGGGTCCGGAATaGAGGGTGGGGCCACTAGAC +
Preference number: 4 (lower is better)
Translates to: LGRGLIRIETDDVGSAPAPWGPE*RVGPLD
Trigger: GTCTAGTGGCCCCACCCTCCATTCCGGACCCCATGG...TGCAGGTGCTGAACCAACATCATCAGTTTCTATTCTAATCAGGCCCCTTCCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR CCA 90 bp GGCCGAGGGTTGAACGTTTATTCATCACAATTAACAGCCTATACAAGCATCTCTCAGGGGCTGGGCCCATaGGGTCCGGAATGGAGGGTG +
Preference number: 4 (lower is better)
Translates to: GRGLNVYSSQLTAYTSISQGLGP*GPEWRV
Trigger: CACCCTCCATTCCGGACCCCATGGGCCCAGCCCCTG...AGAGATGCTTGTATAGGCTGTTAATTGTGATGAATAAACGTTCAACCCTCGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324685.11
ENST00000357890.9
CDS-3UTR CCA 90 bp TACCTCCTTCAGCCCTTGGCACAAGAGCCAGACCAAGGTGTCCAGGGAACTCCACAAGGAACAAGGACATaGCTCACTGGTCCTCATTTG +
Preference number: 4 (lower is better)
Translates to: YLLQPLAQEPDQGVQGTPQGTRT*LTGPHL
Trigger: CAAATGAGGACCAGTGAGCCATGTCCTTGTTCCTTG...TGGAGTTCCCTGGACACCTTGGTCTGGCTCTTGTGCCAAGGGCTGAAGGAGGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
ENST00000602784.1
CDS-3UTR CCA 90 bp CACCTGCAAGATGAGGAAGGTGACTGCAGCAACCTTAGAGCTTCCCAAAGGAAGACCTCCTTCAGCCCTTaGCACAAGAGCCAGACCAAG +
Preference number: 4 (lower is better)
Translates to: HLQDEEGDCSNLRASQRKTSFSP*HKSQTK
Trigger: CTTGGTCTGGCTCTTGTGCCAAGGGCTGAAGGAGGT...CTTCCTTTGGGAAGCTCTAAGGTTGCTGCAGTCACCTTCCTCATCTTGCAGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
ENST00000602784.1
CDS-3UTR CCA 90 bp TGCAGGCCGAGGGTTGAACGTTTATTCATCACAATTAACAGCCTATACAAGCATGCAGCTCCAACCCTCTaGCCTCTCCGGGCACTGCCC +
Preference number: 4 (lower is better)
Translates to: CRPRVERLFITINSLYKHAAPTL*PLRALP
Trigger: GGGCAGTGCCCGGAGAGGCCAGAGGGTTGGAGCTGC...ATGCTTGTATAGGCTGTTAATTGTGATGAATAAACGTTCAACCCTCGGCCTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324685.11
ENST00000357890.9
3UTR CAA 72 bp GTGCGCGGCCTGGCTACTCTGGCTGCAGGCCGAGGGTaGAACGTTTATTCATCACAATTAACAGCCTATACA +
Preference number: 4 (lower is better)
Translates to: VRGLATLAAGRG*NVYSSQLTAYT
Trigger: TGTATAGGCTGTTAATTGTGATGAATAAACGTTCAACCCTCGGCCTGCAGCCAGAGTAGCCAGGCCGCGCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324685.11
ENST00000357890.9
CDS-3UTR TCA 90 bp AAATGGAGATTGGGAAGGGGCCTGATTAGAATAGAAACTGATGATGTTGGTTCACGATGCAGGGTCCCCTaGGGGGCGTCAAACGGGAGG +
Preference number: 4 (lower is better)
Translates to: KWRLGRGLIRIETDDVGSRCRVP*GASNGR
Trigger: CCTCCCGTTTGACGCCCCTCAGGGGACCCTGCATCG...TGAACCAACATCATCAGTTTCTATTCTAATCAGGCCCCTTCCCAATCTCCATTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR TCA 90 bp GAACGAAGCTTGGCTGATCCCATGCCCACTAGCATGCACCAGGGTCCCCAAACCCCAGTTTCTTGTTCTTaGACTGTAGTACCTTCAGGT +
Preference number: 4 (lower is better)
Translates to: ERSLADPMPTSMHQGPQTPVSCS*TVVPSG
Trigger: ACCTGAAGGTACTACAGTTCAAGAACAAGAAACTGG...GGTTTGGGGACCCTGGTGCATGCTAGTGGGCATGGGATCAGCCAAGCTTCGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR TCA 90 bp CACCTGCAAGATGAGGAAGGTGACTGCAGCAACCTTAGAGCTTCCCAAAGGAAGCTCGTTGTAGAGCAGTaGGAATTGGGCCTGCAGCAT +
Preference number: 4 (lower is better)
Translates to: HLQDEEGDCSNLRASQRKLVVEQ*ELGLQH
Trigger: ATGCTGCAGGCCCAATTCTCACTGCTCTACAACGAG...CTTCCTTTGGGAAGCTCTAAGGTTGCTGCAGTCACCTTCCTCATCTTGCAGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324685.11
ENST00000563683.5
CDS-3UTR TCA 90 bp AGCACCTGCAAGATGAGGAAGGTGACTGCAGCAACCTTAGAGCTTCCCAAAGGACTCGTTGTAGAGCAGTaGGAATTGGGCCTGCAGCAT +
Preference number: 4 (lower is better)
Translates to: STCKMRKVTAATLELPKGLVVEQ*ELGLQH
Trigger: ATGCTGCAGGCCCAATTCTCACTGCTCTACAACGAG...TCCTTTGGGAAGCTCTAAGGTTGCTGCAGTCACCTTCCTCATCTTGCAGGTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324685.11
ENST00000563683.5
CDS-3UTR TCA 90 bp AACAAGGAACAAGGACATGGCTCACTGGTCCTCATTTGTGAGCCAGTAGGCAGGTGTCCTCCAGCTGAATaGCCTCTGTGCGTAGCTTCT +
Preference number: 4 (lower is better)
Translates to: NKEQGHGSLVLICEPVGRCPPAE*PLCVAS
Trigger: AGAAGCTACGCACAGAGGTCATTCAGCTGGAGGACA...CCTGCCTACTGGCTCACAAATGAGGACCAGTGAGCCATGTCCTTGTTCCTTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR TCA 90 bp TTTTCCTTAGGGTTAGGATGCATCCACGGAGACAGACAGGTTAGGGCCAGTTTCCTGCTCGGAGACCCTTaGGGAGTTCTGATTCCTTCC +
Preference number: 4 (lower is better)
Translates to: FSLGLGCIHGDRQVRASFLLGDP*GVLIPS
Trigger: GGAAGGAATCAGAACTCCTCAAGGGTCTCCGAGCAG...GAAACTGGCCCTAACCTGTCTGTCTCCGTGGATGCATCCTAACCCTAAGGAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR TCA 90 bp TGTTGGTTCAGCACCTGCAAGATGAGGAAGGTGACTGCAGCAACCTTAGAGCTTCTGCTCCTTGGGCGCTaGCTTGTACATATCCAGCAG +
Preference number: 4 (lower is better)
Translates to: CWFSTCKMRKVTAATLELLLLGR*LVHIQQ
Trigger: CTGCTGGATATGTACAAGTCAGCGCCCAAGGAGCAG...AAGCTCTAAGGTTGCTGCAGTCACCTTCCTCATCTTGCAGGTGCTGAACCAACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR TCA 90 bp TGTTGGTTCAGCACCTGCAAGATGAGGAAGGTGACTGCAGCAACCTTAGAGCTTTCCCGCAGCAGCTTGTaGATCTGGTTGGCCTTGATC +
Preference number: 4 (lower is better)
Translates to: CWFSTCKMRKVTAATLELSRSSL*IWLALI
Trigger: GATCAAGGCCAACCAGATTCACAAGCTGCTGCGGGA...AAGCTCTAAGGTTGCTGCAGTCACCTTCCTCATCTTGCAGGTGCTGAACCAACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR TCA 90 bp GCCAAGAGGGTACCTCCTTCAGCCCTTGGCACAAGAGCCAGACCAAGGTGTCCAAGTTTCAGGTTCAGCTaGTGTAGATACGATGGAAGT +
Preference number: 4 (lower is better)
Translates to: AKRVPPSALGTRARPRCPSFRFS*CRYDGS
Trigger: ACTTCCATCGTATCTACATCAGCTGAACCTGAAACT...TGGACACCTTGGTCTGGCTCTTGTGCCAAGGGCTGAAGGAGGTACCCTCTTGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
ENST00000602784.1
CDS-3UTR TCA 90 bp GCAGGCAGACAGGACACAGGCTCAGTCACAGGGTGTCAGGGGGAAGCTCTTCTAAGTTTCAGGTTCAGCTaGTGTAGATACGATGGAAGT +
Preference number: 4 (lower is better)
Translates to: AGRQDTGSVTGCQGEALLSFRFS*CRYDGS
Trigger: ACTTCCATCGTATCTACATCAGCTGAACCTGAAACT...TAGAAGAGCTTCCCCCTGACACCCTGTGACTGAGCCTGTGTCCTGTCTGCCTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
ENST00000602784.1
CDS-3UTR GCA 90 bp TACCTCCTTCAGCCCTTGGCACAAGAGCCAGACCAAGGTGTCCAGGGAACTCCATTGTTCCAGCCGCTCTaGCAGTTTCTTGTTCTTGAA +
Preference number: 4 (lower is better)
Translates to: YLLQPLAQEPDQGVQGTPLFQPL*QFLVLE
Trigger: TTCAAGAACAAGAAACTGGCAGAGCGGCTGGAACAA...TGGAGTTCCCTGGACACCTTGGTCTGGCTCTTGTGCCAAGGGCTGAAGGAGGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR GCA 90 bp GGCCTGGCTACTCTGGCTGCAGGCCGAGGGTTGAACGTTTATTCATCACAATTAGCATCATCTGTGGCCTaGCGCTTCTCCAACTTCTCA +
Preference number: 4 (lower is better)
Translates to: GLATLAAGRGLNVYSSQLASSVA*RFSNFS
Trigger: TGAGAAGTTGGAGAAGCGGCAGGCCACAGATGATGC...TAATTGTGATGAATAAACGTTCAACCCTCGGCCTGCAGCCAGAGTAGCCAGGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324685.11
ENST00000357890.9
CDS-3UTR GCA 90 bp TTGGGAAGGGGCCTGATTAGAATAGAAACTGATGATGTTGGTTCAGCACCTGCAGCTGCTGGCACCCAGTaGCACCACAAAAGCCAAGGC +
Preference number: 4 (lower is better)
Translates to: LGRGLIRIETDDVGSAPAAAGTQ*HHKSQG
Trigger: GCCTTGGCTTTTGTGGTGGCACTGGGTGCCAGCAGC...TGCAGGTGCTGAACCAACATCATCAGTTTCTATTCTAATCAGGCCCCTTCCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR GCA 90 bp ACAAGCATCTCTAGAACAGAGGCTGTGGGTCCAAACGGGTCCCTGCAGCTCCAAAGTACTCCAATGAGATaGGGTGGTGTTTCTCCTGCA +
Preference number: 4 (lower is better)
Translates to: TSISRTEAVGPNGSLQLQSTPMR*GGVSPA
Trigger: TGCAGGAGAAACACCACCGCATCTCATTGGAGTACT...TTGGAGCTGCAGGGACCCGTTTGGACCCACAGCCTCTGTTCTAGAGATGCTTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR GCA 90 bp CAAGATGAGGAAGGTGACTGCAGCAACCTTAGAGCTTCCCAAAGGAAGCAAGTGCCTGGGCCCGGAGCTTaGCAATCTCAGCTTGTACTT +
Preference number: 4 (lower is better)
Translates to: QDEEGDCSNLRASQRKQVPGPGA*QSQLVL
Trigger: AAGTACAAGCTGAGATTGGCAAGCTCCGGGCCCAGG...CACTTGCTTCCTTTGGGAAGCTCTAAGGTTGCTGCAGTCACCTTCCTCATCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR GCA 90 bp CAATTAACAGCCTATACAAGCATCTCTAGAACAGAGGCTGTGGGTCCAAACGGGCCTCCAATTCCCGGATaGGGCTCCGCAGCTCATCAA +
Preference number: 4 (lower is better)
Translates to: QLTAYTSISRTEAVGPNGPPIPG*GSAAHQ
Trigger: TTGATGAGCTGCGGAGCCGCATCCGGGAATTGGAGG...CCCGTTTGGACCCACAGCCTCTGTTCTAGAGATGCTTGTATAGGCTGTTAATTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR GCA 90 bp AACAAGGAACAAGGACATGGCTCACTGGTCCTCATTTGTGAGCCAGTAGGCAGGGATTTCGTCGGCATCTaGGTAGACCTCCACCTTCCT +
Preference number: 4 (lower is better)
Translates to: NKEQGHGSLVLICEPVGRDFVGI*VDLHLP
Trigger: AGGAAGGTGGAGGTCTACGCAGATGCCGACGAAATC...CCTGCCTACTGGCTCACAAATGAGGACCAGTGAGCCATGTCCTTGTTCCTTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR GCA 90 bp ACAGCCTATACAAGCATCTCTAGAACAGAGGCTGTGGGTCCAAACGGGTCCCTGTCCTTAGGGTTAGGATaGATCCACGGAGACAGACAG +
Preference number: 4 (lower is better)
Translates to: TAYTSISRTEAVGPNGSLSLGLG*IHGDRQ
Trigger: CTGTCTGTCTCCGTGGATGCATCCTAACCCTAAGGA...CAGGGACCCGTTTGGACCCACAGCCTCTGTTCTAGAGATGCTTGTATAGGCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
ENST00000602784.1
CDS-3UTR GCA 90 bp CAAGATGAGGAAGGTGACTGCAGCAACCTTAGAGCTTCCCAAAGGAAGCAAGTGAGTCTTCCTGGGGCCTaGAGCCCAGTCTCAAACAAG +
Preference number: 4 (lower is better)
Translates to: QDEEGDCSNLRASQRKQVSLPGA*SPVSNK
Trigger: CTTGTTTGAGACTGGGCTGCAGGCCCCAGGAAGACT...CACTTGCTTCCTTTGGGAAGCTCTAAGGTTGCTGCAGTCACCTTCCTCATCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
ENST00000602784.1
CDS-3UTR GCA 90 bp ACAAGCATCTCTAGAACAGAGGCTGTGGGTCCAAACGGGTCCCTGCAGCTCCAATGTTGGTTCAGCACCTaGAAGATGAGGAAGGTGACT +
Preference number: 4 (lower is better)
Translates to: TSISRTEAVGPNGSLQLQCWFST*KMRKVT
Trigger: AGTCACCTTCCTCATCTTGCAGGTGCTGAACCAACA...TTGGAGCTGCAGGGACCCGTTTGGACCCACAGCCTCTGTTCTAGAGATGCTTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
ENST00000602784.1
CDS-3UTR GCA 90 bp AAATGGAGATTGGGAAGGGGCCTGATTAGAATAGAAACTGATGATGTTGGTTCAGGCCTCTCCGGGCACTaGCCTCACAGCCGATGGAGC +
Preference number: 4 (lower is better)
Translates to: KWRLGRGLIRIETDDVGSGLSGH*PHSRWS
Trigger: GCTCCATCGGCTGTGAGGGCAGTGCCCGGAGAGGCC...TGAACCAACATCATCAGTTTCTATTCTAATCAGGCCCCTTCCCAATCTCCATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
ENST00000602784.1
CDS-3UTR GCA 90 bp AGGTGGCCGCGTCTCTATGATGCAATATCCTGCGTTTTTCCCACCCTCGCACCGTATGATGCAATATCCTaGGTTTTTCCCACCCTCGCA +
Preference number: 4 (lower is better)
Translates to: RWPRLYDAISCVFPTLAPYDAIS*VFPTLA
Trigger: TGCGAGGGTGGGAAAAACGCAGGATATTGCATCATA...CGGTGCGAGGGTGGGAAAAACGCAGGATATTGCATCATAGAGACGCGGCCACCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000324685.11
CDS-3UTR GCA 90 bp AAATGGAGATTGGGAAGGGGCCTGATTAGAATAGAAACTGATGATGTTGGTTCATCCACCCGTGACCGGTaGGGCGCTCCTGAGACTGGC +
Preference number: 4 (lower is better)
Translates to: KWRLGRGLIRIETDDVGSSTRDR*GAPETG
Trigger: GCCAGTCTCAGGAGCGCCGCACCGGTCACGGGTGGA...TGAACCAACATCATCAGTTTCTATTCTAATCAGGCCCCTTCCCAATCTCCATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324685.11
CDS-3UTR CCA 90 bp TTTTCCTTAGGGTTAGGATGCATCCACGGAGACAGACAGGTTAGGGCCAGTTTCGGTCCATCTCCTCCGTaGAAGAGATGCCTCCAAGAC +
Preference number: 4 (lower is better)
Translates to: FSLGLGCIHGDRQVRASFGPSPP*KRCLQD
Trigger: GTCTTGGAGGCATCTCTTCCACGGAGGAGATGGACC...GAAACTGGCCCTAACCTGTCTGTCTCCGTGGATGCATCCTAACCCTAAGGAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR CCA 90 bp CACCTGCAAGATGAGGAAGGTGACTGCAGCAACCTTAGAGCTTCCCAAAGGAAGGAGACACAGCTGCCTTaGAGAACTCCATTCGGCCTT +
Preference number: 4 (lower is better)
Translates to: HLQDEEGDCSNLRASQRKETQLP*RTPFGL
Trigger: AAGGCCGAATGGAGTTCTCCAAGGCAGCTGTGTCTC...CTTCCTTTGGGAAGCTCTAAGGTTGCTGCAGTCACCTTCCTCATCTTGCAGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR CCA 90 bp GGGTGGCCTTTAGCGCAGATATCTAGAGAGACGATGCGGAATTACTTGGCATCTCGAGCCTCGTCTAGCTaGGTCTTCACTTGCAGAGAC +
Preference number: 4 (lower is better)
Translates to: GWPLAQISRETMRNYLASRASSS*VFTCRD
Trigger: GTCTCTGCAAGTGAAGACCCAGCTAGACGAGGCTCG...AGATGCCAAGTAATTCCGCATCGTCTCTCTAGATATCTGCGCTAAAGGCCACCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324685.11
CDS-3UTR CCA 90 bp CAAGATGAGGAAGGTGACTGCAGCAACCTTAGAGCTTCCCAAAGGAAGCAAGTGTCGATGTGTCGCAGGTaGGAGTTCTTTGTGGCCAGC +
Preference number: 4 (lower is better)
Translates to: QDEEGDCSNLRASQRKQVSMCRR*EFFVAS
Trigger: GCTGGCCACAAAGAACTCCCACCTGCGACACATCGA...CACTTGCTTCCTTTGGGAAGCTCTAAGGTTGCTGCAGTCACCTTCCTCATCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324685.11
ENST00000563683.5
CDS-3UTR CCA 90 bp TATTCATCACAATTAACAGCCTATACAAGCATCTCTAGAACAGAGGCTGTGGGTAGTGGGCAGAGCCACTaGCCTGGGCCCGGAGCTTGC +
Preference number: 4 (lower is better)
Translates to: YSSQLTAYTSISRTEAVGSGQSH*PGPGAC
Trigger: GCAAGCTCCGGGCCCAGGCCAGTGGCTCTGCCCACT...ACCCACAGCCTCTGTTCTAGAGATGCTTGTATAGGCTGTTAATTGTGATGAATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR CCA 90 bp GGCCGAGGGTTGAACGTTTATTCATCACAATTAACAGCCTATACAAGCATCTCTAGGTTGGGGGTGGAGTaGGCAGAGCCACTGGCCTGG +
Preference number: 4 (lower is better)
Translates to: GRGLNVYSSQLTAYTSISRLGVE*AEPLAW
Trigger: CCAGGCCAGTGGCTCTGCCCACTCCACCCCCAACCT...AGAGATGCTTGTATAGGCTGTTAATTGTGATGAATAAACGTTCAACCCTCGGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000324685.11
ENST00000357890.9
CDS-3UTR CCA 90 bp TATTCATCACAATTAACAGCCTATACAAGCATCTCTAGAACAGAGGCTGTGGGTCGGGAGGAAGGGCCCTaGGCCCCAGGGGTTATACCC +
Preference number: 4 (lower is better)
Translates to: YSSQLTAYTSISRTEAVGREEGP*APGVIP
Trigger: GGGTATAACCCCTGGGGCCCAGGGCCCTTCCTCCCG...ACCCACAGCCTCTGTTCTAGAGATGCTTGTATAGGCTGTTAATTGTGATGAATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR CCA 90 bp TTGGGAAGGGGCCTGATTAGAATAGAAACTGATGATGTTGGTTCAGCACCTGCACTCCAGGGGCGAAGGTaGCCGCGTCTCTATGATGCA +
Preference number: 4 (lower is better)
Translates to: LGRGLIRIETDDVGSAPALQGRR*PRLYDA
Trigger: TGCATCATAGAGACGCGGCCACCTTCGCCCCTGGAG...TGCAGGTGCTGAACCAACATCATCAGTTTCTATTCTAATCAGGCCCCTTCCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324685.11
CDS-3UTR TCA 90 bp GGGTGGCCTTTAGCGCAGATATCTAGAGAGACGATGCGGAATTACTTGGCATCTCTGCCAGGTGCTTATTaGGCTTTTGCTCTCGCTTCC +
Preference number: 4 (lower is better)
Translates to: GWPLAQISRETMRNYLASLPGAY*AFALAS
Trigger: GGAAGCGAGAGCAAAAGCTCAATAAGCACCTGGCAG...AGATGCCAAGTAATTCCGCATCGTCTCTCTAGATATCTGCGCTAAAGGCCACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324685.11
CDS-3UTR TCA 90 bp CCTTTAGCGCAGATATCTAGAGAGACGATGCGGAATTACTTGGCATCTACTCAATGCGTTCCGCTGCCATaGGCTGCACCTTATCCCGCT +
Preference number: 4 (lower is better)
Translates to: PLAQISRETMRNYLASTQCVPLP*AAPYPA
Trigger: AGCGGGATAAGGTGCAGCTCATGGCAGCGGAACGCA...TTGAGTAGATGCCAAGTAATTCCGCATCGTCTCTCTAGATATCTGCGCTAAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324685.11
CDS-3UTR GCA 90 bp TGGTTCAGCACCTGCAAGATGAGGAAGGTGACTGCAGCAACCTTAGAGCTTCCCAGTACTCCAATGAGATaGGGTGGTGTTTCTCCTGCA +
Preference number: 4 (lower is better)
Translates to: WFSTCKMRKVTAATLELPSTPMR*GGVSPA
Trigger: TGCAGGAGAAACACCACCGCATCTCATTGGAGTACT...GGGAAGCTCTAAGGTTGCTGCAGTCACCTTCCTCATCTTGCAGGTGCTGAACCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR GCA 90 bp AACAAGGAACAAGGACATGGCTCACTGGTCCTCATTTGTGAGCCAGTAGGCAGGCAGCACCTTGGTCTCTaGCGATGTCACTTTATCCTG +
Preference number: 4 (lower is better)
Translates to: NKEQGHGSLVLICEPVGRQHLGL*RCHFIL
Trigger: CAGGATAAAGTGACATCGGCAGAGACCAAGGTGCTG...CCTGCCTACTGGCTCACAAATGAGGACCAGTGAGCCATGTCCTTGTTCCTTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR GCA 90 bp AACAAGGAACAAGGACATGGCTCACTGGTCCTCATTTGTGAGCCAGTAGGCAGGGCACTTGGTAAGGACTaGATCCTTCTTGCGGGTGTT +
Preference number: 4 (lower is better)
Translates to: NKEQGHGSLVLICEPVGRALGKD*ILLAGV
Trigger: AACACCCGCAAGAAGGATGCAGTCCTTACCAAGTGC...CCTGCCTACTGGCTCACAAATGAGGACCAGTGAGCCATGTCCTTGTTCCTTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR GCA 90 bp TTGGGAAGGGGCCTGATTAGAATAGAAACTGATGATGTTGGTTCAGCACCTGCACACCAAAGGCCGCGTTaGACTTGGGGCACTTCCTCT +
Preference number: 4 (lower is better)
Translates to: LGRGLIRIETDDVGSAPAHQRPR*TWGTSS
Trigger: AGAGGAAGTGCCCCAAGTGCAACGCGGCCTTTGGTG...TGCAGGTGCTGAACCAACATCATCAGTTTCTATTCTAATCAGGCCCCTTCCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR GCA 90 bp CCTTTAGCGCAGATATCTAGAGAGACGATGCGGAATTACTTGGCATCTACTCAAGCTCCCGAGGCCGATTaGAACGAGGGAAGTCACCCA +
Preference number: 4 (lower is better)
Translates to: PLAQISRETMRNYLASTQAPEAD*NEGSHP
Trigger: TGGGTGACTTCCCTCGTTGCAATCGGCCTCGGGAGC...TTGAGTAGATGCCAAGTAATTCCGCATCGTCTCTCTAGATATCTGCGCTAAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324685.11
CDS-3UTR CCA 90 bp TTGGGAAGGGGCCTGATTAGAATAGAAACTGATGATGTTGGTTCAGCACCTGCAGAAGACAGCTCCCCCTaGCTCTCATGGCATCGGAGA +
Preference number: 4 (lower is better)
Translates to: LGRGLIRIETDDVGSAPAEDSSP*LSWHRR
Trigger: TCTCCGATGCCATGAGAGCCAGGGGGAGCTGTCTTC...TGCAGGTGCTGAACCAACATCATCAGTTTCTATTCTAATCAGGCCCCTTCCCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR CCA 90 bp TATTCATCACAATTAACAGCCTATACAAGCATCTCTAGAACAGAGGCTGTGGGTAGGTTGGGGGTGGAGTaGGCAGAGCCACTGGCCTGG +
Preference number: 4 (lower is better)
Translates to: YSSQLTAYTSISRTEAVGRLGVE*AEPLAW
Trigger: CCAGGCCAGTGGCTCTGCCCACTCCACCCCCAACCT...ACCCACAGCCTCTGTTCTAGAGATGCTTGTATAGGCTGTTAATTGTGATGAATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR CCA 90 bp AACAAGGAACAAGGACATGGCTCACTGGTCCTCATTTGTGAGCCAGTAGGCAGGCTGATTCCTTCCGCTTaGTTTCTTCCACCTTGGCCT +
Preference number: 4 (lower is better)
Translates to: NKEQGHGSLVLICEPVGRLIPSA*FLPPWP
Trigger: AGGCCAAGGTGGAAGAAACCAAGCGGAAGGAATCAG...CCTGCCTACTGGCTCACAAATGAGGACCAGTGAGCCATGTCCTTGTTCCTTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR CCA 90 bp CACCTGCAAGATGAGGAAGGTGACTGCAGCAACCTTAGAGCTTCCCAAAGGAAGCTGATTCCTTCCGCTTaGTTTCTTCCACCTTGGCCT +
Preference number: 4 (lower is better)
Translates to: HLQDEEGDCSNLRASQRKLIPSA*FLPPWP
Trigger: AGGCCAAGGTGGAAGAAACCAAGCGGAAGGAATCAG...CTTCCTTTGGGAAGCTCTAAGGTTGCTGCAGTCACCTTCCTCATCTTGCAGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR CCA 90 bp GGCCGAGGGTTGAACGTTTATTCATCACAATTAACAGCCTATACAAGCATCTCTTTGAGCTCCAGGGCTTaGCTGCGCAGCGTCAGCTCC +
Preference number: 4 (lower is better)
Translates to: GRGLNVYSSQLTAYTSISLSSRA*LRSVSS
Trigger: GGAGCTGACGCTGCGCAGCCAAGCCCTGGAGCTCAA...AGAGATGCTTGTATAGGCTGTTAATTGTGATGAATAAACGTTCAACCCTCGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324685.11
ENST00000357890.9
CDS-3UTR CCA 90 bp TTAGGATGCATCCACGGAGACAGACAGGTTAGGGCCAGTTTCCGGGAAGCTCAGTCGAAGCAGAAAACGTaGAAGCACTTGGTAAGGACT +
Preference number: 4 (lower is better)
Translates to: LGCIHGDRQVRASFREAQSKQKT*KHLVRT
Trigger: AGTCCTTACCAAGTGCTTCCACGTTTTCTGCTTCGA...CTGAGCTTCCCGGAAACTGGCCCTAACCTGTCTGTCTCCGTGGATGCATCCTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR CCA 90 bp TGCAGGCCGAGGGTTGAACGTTTATTCATCACAATTAACAGCCTATACAAGCATCCATGGGGTCCGGAATaGAGGGTGGGGCCACTAGAC +
Preference number: 4 (lower is better)
Translates to: CRPRVERLFITINSLYKHPWGPE*RVGPLD
Trigger: GTCTAGTGGCCCCACCCTCCATTCCGGACCCCATGG...ATGCTTGTATAGGCTGTTAATTGTGATGAATAAACGTTCAACCCTCGGCCTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324685.11
ENST00000357890.9
CDS-3UTR CCA 90 bp TGTTGGTTCAGCACCTGCAAGATGAGGAAGGTGACTGCAGCAACCTTAGAGCTTTCTAGCTGGAATGATTaGAAGTTGGCCCAGCGGCTG +
Preference number: 4 (lower is better)
Translates to: CWFSTCKMRKVTAATLELSSWND*KLAQRL
Trigger: CAGCCGCTGGGCCAACTTCCAATCATTCCAGCTAGA...AAGCTCTAAGGTTGCTGCAGTCACCTTCCTCATCTTGCAGGTGCTGAACCAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
ENST00000602784.1
CDS-3UTR CCA 90 bp ACAGCCTATACAAGCATCTCTAGAACAGAGGCTGTGGGTCCAAACGGGTCCCTGGGAAGCTCTTCTAGCTaGAATGATTGGAAGTTGGCC +
Preference number: 4 (lower is better)
Translates to: TAYTSISRTEAVGPNGSLGSSSS*NDWKLA
Trigger: GGCCAACTTCCAATCATTCCAGCTAGAAGAGCTTCC...CAGGGACCCGTTTGGACCCACAGCCTCTGTTCTAGAGATGCTTGTATAGGCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
ENST00000602784.1
CDS-3UTR TCA 90 bp AAATGGAGATTGGGAAGGGGCCTGATTAGAATAGAAACTGATGATGTTGGTTCACTCCCGATCAGCCCTTaGGAGAGCGGAGGCTACAGG +
Preference number: 4 (lower is better)
Translates to: KWRLGRGLIRIETDDVGSLPISP*ESGGYR
Trigger: CCTGTAGCCTCCGCTCTCTCAAGGGCTGATCGGGAG...TGAACCAACATCATCAGTTTCTATTCTAATCAGGCCCCTTCCCAATCTCCATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR TCA 90 bp TTTTCCTTAGGGTTAGGATGCATCCACGGAGACAGACAGGTTAGGGCCAGTTTCCCTAGGCTGCAGCTCTaGCCTTTAGGAAAAGATGGA +
Preference number: 4 (lower is better)
Translates to: FSLGLGCIHGDRQVRASFPRLQL*PLGKDG
Trigger: TCCATCTTTTCCTAAAGGTCAGAGCTGCAGCCTAGG...GAAACTGGCCCTAACCTGTCTGTCTCCGTGGATGCATCCTAACCCTAAGGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR GCA 90 bp TTTTCCTTAGGGTTAGGATGCATCCACGGAGACAGACAGGTTAGGGCCAGTTTCCAGCACCTTGGTCTCTaGCGATGTCACTTTATCCTG +
Preference number: 4 (lower is better)
Translates to: FSLGLGCIHGDRQVRASFQHLGL*RCHFIL
Trigger: CAGGATAAAGTGACATCGGCAGAGACCAAGGTGCTG...GAAACTGGCCCTAACCTGTCTGTCTCCGTGGATGCATCCTAACCCTAAGGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR GCA 90 bp TGCAGGCCGAGGGTTGAACGTTTATTCATCACAATTAACAGCCTATACAAGCATGTGCGTAGCTTCTTCTaGAGCCCCAGCTCGTCGCTC +
Preference number: 4 (lower is better)
Translates to: CRPRVERLFITINSLYKHVRSFF*SPSSSL
Trigger: GAGCGACGAGCTGGGGCTGCAGAAGAAGCTACGCAC...ATGCTTGTATAGGCTGTTAATTGTGATGAATAAACGTTCAACCCTCGGCCTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324685.11
ENST00000357890.9
CDS-3UTR GCA 90 bp AAATGGAGATTGGGAAGGGGCCTGATTAGAATAGAAACTGATGATGTTGGTTCACCTCTGCCTGCCGAATaGGCCGCAGGGCATCCTCAT +
Preference number: 4 (lower is better)
Translates to: KWRLGRGLIRIETDDVGSPLPAE*AAGHPH
Trigger: ATGAGGATGCCCTGCGGCGCATTCGGCAGGCAGAGG...TGAACCAACATCATCAGTTTCTATTCTAATCAGGCCCCTTCCCAATCTCCATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR GCA 90 bp TATTCATCACAATTAACAGCCTATACAAGCATCTCTAGAACAGAGGCTGTGGGTGTCCAAACGGGTCCCTaGAGCTCCAACCCTCTGGCC +
Preference number: 4 (lower is better)
Translates to: YSSQLTAYTSISRTEAVGVQTGP*SSNPLA
Trigger: GGCCAGAGGGTTGGAGCTGCAGGGACCCGTTTGGAC...ACCCACAGCCTCTGTTCTAGAGATGCTTGTATAGGCTGTTAATTGTGATGAATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
ENST00000602784.1
CDS-3UTR GCA 90 bp GGCCGAGGGTTGAACGTTTATTCATCACAATTAACAGCCTATACAAGCATCTCTCCTGGCTACTCTGGCTaGAGGCCGAGGGTTGAACGT +
Preference number: 4 (lower is better)
Translates to: GRGLNVYSSQLTAYTSISPGYSG*RPRVER
Trigger: ACGTTCAACCCTCGGCCTGCAGCCAGAGTAGCCAGG...AGAGATGCTTGTATAGGCTGTTAATTGTGATGAATAAACGTTCAACCCTCGGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324685.11
ENST00000357890.9
CDS-3UTR CCA 90 bp CCTTTAGCGCAGATATCTAGAGAGACGATGCGGAATTACTTGGCATCTACTCAAGAAGACAGCTCCCCCTaGCTCTCATGGCATCGGAGA +
Preference number: 4 (lower is better)
Translates to: PLAQISRETMRNYLASTQEDSSP*LSWHRR
Trigger: TCTCCGATGCCATGAGAGCCAGGGGGAGCTGTCTTC...TTGAGTAGATGCCAAGTAATTCCGCATCGTCTCTCTAGATATCTGCGCTAAAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324685.11
CDS-3UTR CCA 90 bp TTGGGAAGGGGCCTGATTAGAATAGAAACTGATGATGTTGGTTCAGCACCTGCATTCCGCTTGTATCGCTaGGCGTCCCCTTTTAGCTGG +
Preference number: 4 (lower is better)
Translates to: LGRGLIRIETDDVGSAPAFRLYR*ASPFSW
Trigger: CCAGCTAAAAGGGGACGCCCAGCGATACAAGCGGAA...TGCAGGTGCTGAACCAACATCATCAGTTTCTATTCTAATCAGGCCCCTTCCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR CCA 90 bp GGCCGAGGGTTGAACGTTTATTCATCACAATTAACAGCCTATACAAGCATCTCTCTCTTTCCCTGGGGCTaGGGCACTGACGCCAGAATC +
Preference number: 4 (lower is better)
Translates to: GRGLNVYSSQLTAYTSISLFPWG*GTDARI
Trigger: GATTCTGGCGTCAGTGCCCCAGCCCCAGGGAAAGAG...AGAGATGCTTGTATAGGCTGTTAATTGTGATGAATAAACGTTCAACCCTCGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324685.11
ENST00000357890.9
CDS-3UTR CCA 90 bp TGTTGGTTCAGCACCTGCAAGATGAGGAAGGTGACTGCAGCAACCTTAGAGCTTTCCTTGATCTCCTCCTaGAGGATTTCGTCGGCATCT +
Preference number: 4 (lower is better)
Translates to: CWFSTCKMRKVTAATLELSLISS*RISSAS
Trigger: AGATGCCGACGAAATCCTCCAGGAGGAGATCAAGGA...AAGCTCTAAGGTTGCTGCAGTCACCTTCCTCATCTTGCAGGTGCTGAACCAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR CCA 90 bp TTTTCCTTAGGGTTAGGATGCATCCACGGAGACAGACAGGTTAGGGCCAGTTTCAGATGGAACGAAGCTTaGCTGATCCCATGCCCACTA +
Preference number: 4 (lower is better)
Translates to: FSLGLGCIHGDRQVRASFRWNEA*LIPCPL
Trigger: TAGTGGGCATGGGATCAGCCAAGCTTCGTTCCATCT...GAAACTGGCCCTAACCTGTCTGTCTCCGTGGATGCATCCTAACCCTAAGGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR CCA 90 bp TGTTGGTTCAGCACCTGCAAGATGAGGAAGGTGACTGCAGCAACCTTAGAGCTTAGGTTAGGGGGATGGTaGGTGAAGGAAAGTCTTCCT +
Preference number: 4 (lower is better)
Translates to: CWFSTCKMRKVTAATLELRLGGW*VKESLP
Trigger: AGGAAGACTTTCCTTCACCCACCATCCCCCTAACCT...AAGCTCTAAGGTTGCTGCAGTCACCTTCCTCATCTTGCAGGTGCTGAACCAACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
ENST00000602784.1
CDS-3UTR CCA 90 bp AACAAGGAACAAGGACATGGCTCACTGGTCCTCATTTGTGAGCCAGTAGGCAGGGGAAGCTCTTCTAGCTaGAATGATTGGAAGTTGGCC +
Preference number: 4 (lower is better)
Translates to: NKEQGHGSLVLICEPVGRGSSSS*NDWKLA
Trigger: GGCCAACTTCCAATCATTCCAGCTAGAAGAGCTTCC...CCTGCCTACTGGCTCACAAATGAGGACCAGTGAGCCATGTCCTTGTTCCTTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
ENST00000602784.1
CDS-3UTR CCA 90 bp AAATGGAGATTGGGAAGGGGCCTGATTAGAATAGAAACTGATGATGTTGGTTCAGGCGAAGGCTACTCCTaGAAGGGGACCGCGCTTACG +
Preference number: 4 (lower is better)
Translates to: KWRLGRGLIRIETDDVGSGEGYS*KGTALT
Trigger: CGTAAGCGCGGTCCCCTTCCAGGAGTAGCCTTCGCC...TGAACCAACATCATCAGTTTCTATTCTAATCAGGCCCCTTCCCAATCTCCATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324685.11
CDS-3UTR CCA 90 bp CACCTGCAAGATGAGGAAGGTGACTGCAGCAACCTTAGAGCTTCCCAAAGGAAGCGATGCGGAATTACTTaGCATCTACTCAAGAGCCCA +
Preference number: 4 (lower is better)
Translates to: HLQDEEGDCSNLRASQRKRCGIT*HLLKSP
Trigger: TGGGCTCTTGAGTAGATGCCAAGTAATTCCGCATCG...CTTCCTTTGGGAAGCTCTAAGGTTGCTGCAGTCACCTTCCTCATCTTGCAGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324685.11
3UTR CAA 72 bp TTAGCGCAGATATCTAGAGAGACGATGCGGAATTACTaGGCATCTACTCAAGAGCCCAGGCGAAGGCTACTC +
Preference number: 4 (lower is better)
Translates to: LAQISRETMRNY*ASTQEPRRRLL
Trigger: GAGTAGCCTTCGCCTGGGCTCTTGAGTAGATGCCAAGTAATTCCGCATCGTCTCTCTAGATATCTGCGCTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324685.11
CDS-3UTR TCA 90 bp CAATTAACAGCCTATACAAGCATCTCTAGAACAGAGGCTGTGGGTCCAAACGGGACCCTTGAGGAGTTCTaGTTCCTTCCGCTTGGTTTC +
Preference number: 4 (lower is better)
Translates to: QLTAYTSISRTEAVGPNGTLEEF*FLPLGF
Trigger: GAAACCAAGCGGAAGGAATCAGAACTCCTCAAGGGT...CCCGTTTGGACCCACAGCCTCTGTTCTAGAGATGCTTGTATAGGCTGTTAATTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR TCA 90 bp TTTTCCTTAGGGTTAGGATGCATCCACGGAGACAGACAGGTTAGGGCCAGTTTCATGTCCTCAAAAGCCTaGCCTGTCACATCCATCTCT +
Preference number: 4 (lower is better)
Translates to: FSLGLGCIHGDRQVRASFMSSKA*PVTSIS
Trigger: AGAGATGGATGTGACAGGTCAGGCTTTTGAGGACAT...GAAACTGGCCCTAACCTGTCTGTCTCCGTGGATGCATCCTAACCCTAAGGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR GCA 90 bp CAAGATGAGGAAGGTGACTGCAGCAACCTTAGAGCTTCCCAAAGGAAGCAAGTGAAGGCCTCTGCCAGGTaGTTATTGAGCTTTTGCTCT +
Preference number: 4 (lower is better)
Translates to: QDEEGDCSNLRASQRKQVKASAR*LLSFCS
Trigger: AGAGCAAAAGCTCAATAAGCACCTGGCAGAGGCCTT...CACTTGCTTCCTTTGGGAAGCTCTAAGGTTGCTGCAGTCACCTTCCTCATCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR GCA 90 bp GGCCGAGGGTTGAACGTTTATTCATCACAATTAACAGCCTATACAAGCATCTCTTCGTCGCTCTCCATGTaGTCGATGTGTCGCAGGTGG +
Preference number: 4 (lower is better)
Translates to: GRGLNVYSSQLTAYTSISSSLSM*SMCRRW
Trigger: CCACCTGCGACACATCGAGCACATGGAGAGCGACGA...AGAGATGCTTGTATAGGCTGTTAATTGTGATGAATAAACGTTCAACCCTCGGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324685.11
CDS-3UTR GCA 90 bp TATTCATCACAATTAACAGCCTATACAAGCATCTCTAGAACAGAGGCTGTGGGTTCCGCTGCCATGAGCTaGACCTTATCCCGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: YSSQLTAYTSISRTEAVGSAAMS*TLSRCS
Trigger: GGAGCAGCGGGATAAGGTGCAGCTCATGGCAGCGGA...ACCCACAGCCTCTGTTCTAGAGATGCTTGTATAGGCTGTTAATTGTGATGAATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR GCA 90 bp CAATTAACAGCCTATACAAGCATCTCTAGAACAGAGGCTGTGGGTCCAAACGGGTCCTTAGGGTTAGGATaGATCCACGGAGACAGACAG +
Preference number: 4 (lower is better)
Translates to: QLTAYTSISRTEAVGPNGSLGLG*IHGDRQ
Trigger: CTGTCTGTCTCCGTGGATGCATCCTAACCCTAAGGA...CCCGTTTGGACCCACAGCCTCTGTTCTAGAGATGCTTGTATAGGCTGTTAATTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
ENST00000602784.1
CDS-3UTR GCA 90 bp ATGTTGGTTCAGCACCTGCAAGATGAGGAAGGTGACTGCAGCAACCTTAGAGCTTGTTGGTTCAGCACCTaGAAGATGAGGAAGGTGACT +
Preference number: 4 (lower is better)
Translates to: MLVQHLQDEEGDCSNLRACWFST*KMRKVT
Trigger: AGTCACCTTCCTCATCTTGCAGGTGCTGAACCAACA...AGCTCTAAGGTTGCTGCAGTCACCTTCCTCATCTTGCAGGTGCTGAACCAACAT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
ENST00000602784.1
CDS-3UTR GCA 90 bp TTTTCCTTAGGGTTAGGATGCATCCACGGAGACAGACAGGTTAGGGCCAGTTTCTGTTGGTTCAGCACCTaGAAGATGAGGAAGGTGACT +
Preference number: 4 (lower is better)
Translates to: FSLGLGCIHGDRQVRASFCWFST*KMRKVT
Trigger: AGTCACCTTCCTCATCTTGCAGGTGCTGAACCAACA...GAAACTGGCCCTAACCTGTCTGTCTCCGTGGATGCATCCTAACCCTAAGGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
ENST00000602784.1
CDS-3UTR GCA 90 bp ATGTTGGTTCAGCACCTGCAAGATGAGGAAGGTGACTGCAGCAACCTTAGAGCTAACCTCCTAACCATGTaGGGACCAGGAACTACACTT +
Preference number: 4 (lower is better)
Translates to: MLVQHLQDEEGDCSNLRANLLTM*GPGTTL
Trigger: AAGTGTAGTTCCTGGTCCGCACATGGTTAGGAGGTT...AGCTCTAAGGTTGCTGCAGTCACCTTCCTCATCTTGCAGGTGCTGAACCAACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324685.11
CDS-3UTR CCA 90 bp GGGTGGCCTTTAGCGCAGATATCTAGAGAGACGATGCGGAATTACTTGGCATCTAGACTACTAATCAGGTaGCGCATCTCACGGTTGATG +
Preference number: 4 (lower is better)
Translates to: GWPLAQISRETMRNYLASRLLIR*RISRLM
Trigger: CATCAACCGTGAGATGCGCCACCTGATTAGTAGTCT...AGATGCCAAGTAATTCCGCATCGTCTCTCTAGATATCTGCGCTAAAGGCCACCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324685.11
CDS-3UTR CCA 90 bp GGCCGAGGGTTGAACGTTTATTCATCACAATTAACAGCCTATACAAGCATCTCTCTAGAACAGAGGCTGTaGGTCCAAACGGGTCCCTGC +
Preference number: 4 (lower is better)
Translates to: GRGLNVYSSQLTAYTSISLEQRL*VQTGPC
Trigger: GCAGGGACCCGTTTGGACCCACAGCCTCTGTTCTAG...AGAGATGCTTGTATAGGCTGTTAATTGTGATGAATAAACGTTCAACCCTCGGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000602784.1
CDS-3UTR GCA 90 bp TGCAGGCCGAGGGTTGAACGTTTATTCATCACAATTAACAGCCTATACAAGCATAGTCTTCCTGGGGCCTaGAGCCCAGTCTCAAACAAG +
Preference number: 4 (lower is better)
Translates to: CRPRVERLFITINSLYKHSLPGA*SPVSNK
Trigger: CTTGTTTGAGACTGGGCTGCAGGCCCCAGGAAGACT...ATGCTTGTATAGGCTGTTAATTGTGATGAATAAACGTTCAACCCTCGGCCTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324685.11
ENST00000357890.9
CDS-3UTR CCA 90 bp TGCAGGCCGAGGGTTGAACGTTTATTCATCACAATTAACAGCCTATACAAGCATTCCTTCTGGCTCTCCTaGGCCTTCTTGAGCTCTGCT +
Preference number: 4 (lower is better)
Translates to: CRPRVERLFITINSLYKHSFWLS*AFLSSA
Trigger: AGCAGAGCTCAAGAAGGCCCAGGAGAGCCAGAAGGA...ATGCTTGTATAGGCTGTTAATTGTGATGAATAAACGTTCAACCCTCGGCCTGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324685.11
ENST00000357890.9
CDS-3UTR CCA 90 bp CAAGATGAGGAAGGTGACTGCAGCAACCTTAGAGCTTCCCAAAGGAAGCAAGTGTCGAAGCAGAAAACGTaGAAGCACTTGGTAAGGACT +
Preference number: 4 (lower is better)
Translates to: QDEEGDCSNLRASQRKQVSKQKT*KHLVRT
Trigger: AGTCCTTACCAAGTGCTTCCACGTTTTCTGCTTCGA...CACTTGCTTCCTTTGGGAAGCTCTAAGGTTGCTGCAGTCACCTTCCTCATCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR TCA 90 bp ATGTTGGTTCAGCACCTGCAAGATGAGGAAGGTGACTGCAGCAACCTTAGAGCTCCAGTTTCTTGTTCTTaGACTGTAGTACCTTCAGGT +
Preference number: 4 (lower is better)
Translates to: MLVQHLQDEEGDCSNLRAPVSCS*TVVPSG
Trigger: ACCTGAAGGTACTACAGTTCAAGAACAAGAAACTGG...AGCTCTAAGGTTGCTGCAGTCACCTTCCTCATCTTGCAGGTGCTGAACCAACAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR TCA 90 bp GGCCGAGGGTTGAACGTTTATTCATCACAATTAACAGCCTATACAAGCATCTCTCTGCCAGGTGCTTATTaGGCTTTTGCTCTCGCTTCC +
Preference number: 4 (lower is better)
Translates to: GRGLNVYSSQLTAYTSISLPGAY*AFALAS
Trigger: GGAAGCGAGAGCAAAAGCTCAATAAGCACCTGGCAG...AGAGATGCTTGTATAGGCTGTTAATTGTGATGAATAAACGTTCAACCCTCGGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324685.11
ENST00000357890.9
CDS-3UTR TCA 90 bp TTTTCCTTAGGGTTAGGATGCATCCACGGAGACAGACAGGTTAGGGCCAGTTTCAGTTTCAGGTTCAGCTaGTGTAGATACGATGGAAGT +
Preference number: 4 (lower is better)
Translates to: FSLGLGCIHGDRQVRASFSFRFS*CRYDGS
Trigger: ACTTCCATCGTATCTACATCAGCTGAACCTGAAACT...GAAACTGGCCCTAACCTGTCTGTCTCCGTGGATGCATCCTAACCCTAAGGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
ENST00000602784.1
CDS-3UTR GCA 90 bp CAATTAACAGCCTATACAAGCATCTCTAGAACAGAGGCTGTGGGTCCAAACGGGTTGTTCCAGCCGCTCTaGCAGTTTCTTGTTCTTGAA +
Preference number: 4 (lower is better)
Translates to: QLTAYTSISRTEAVGPNGLFQPL*QFLVLE
Trigger: TTCAAGAACAAGAAACTGGCAGAGCGGCTGGAACAA...CCCGTTTGGACCCACAGCCTCTGTTCTAGAGATGCTTGTATAGGCTGTTAATTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR GCA 90 bp AAATGGAGATTGGGAAGGGGCCTGATTAGAATAGAAACTGATGATGTTGGTTCAAGTGATGCCCCCATCTaGCAAGAGGGTACCTCCTTC +
Preference number: 4 (lower is better)
Translates to: KWRLGRGLIRIETDDVGSSDAPI*QEGTSF
Trigger: GAAGGAGGTACCCTCTTGGCAGATGGGGGCATCACT...TGAACCAACATCATCAGTTTCTATTCTAATCAGGCCCCTTCCCAATCTCCATTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
ENST00000602784.1
CDS-3UTR CCA 90 bp TTGGGAAGGGGCCTGATTAGAATAGAAACTGATGATGTTGGTTCAGCACCTGCACAAGGAACAAGGACATaGCTCACTGGTCCTCATTTG +
Preference number: 4 (lower is better)
Translates to: LGRGLIRIETDDVGSAPAQGTRT*LTGPHL
Trigger: CAAATGAGGACCAGTGAGCCATGTCCTTGTTCCTTG...TGCAGGTGCTGAACCAACATCATCAGTTTCTATTCTAATCAGGCCCCTTCCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
ENST00000602784.1
CDS-3UTR CCA 90 bp GGCCGAGGGTTGAACGTTTATTCATCACAATTAACAGCCTATACAAGCATCTCTCCGAGGTTAGGGGGATaGTGGGTGAAGGAAAGTCTT +
Preference number: 4 (lower is better)
Translates to: GRGLNVYSSQLTAYTSISPRLGG*WVKESL
Trigger: AAGACTTTCCTTCACCCACCATCCCCCTAACCTCGG...AGAGATGCTTGTATAGGCTGTTAATTGTGATGAATAAACGTTCAACCCTCGGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000602784.1
CDS-3UTR CCA 90 bp AAATGGAGATTGGGAAGGGGCCTGATTAGAATAGAAACTGATGATGTTGGTTCAATCTGTGCATTCGAGTaGTGTGGGGGTGAAGCCGCT +
Preference number: 4 (lower is better)
Translates to: KWRLGRGLIRIETDDVGSICAFE*CGGEAA
Trigger: AGCGGCTTCACCCCCACACCACTCGAATGCACAGAT...TGAACCAACATCATCAGTTTCTATTCTAATCAGGCCCCTTCCCAATCTCCATTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324685.11
CDS-3UTR TCA 90 bp TATTCATCACAATTAACAGCCTATACAAGCATCTCTAGAACAGAGGCTGTGGGTCTCGGAGTACTCCAATaGGATGCGGTGGTGTTTCTC +
Preference number: 4 (lower is better)
Translates to: YSSQLTAYTSISRTEAVGLGVLQ*DAVVFL
Trigger: GAGAAACACCACCGCATCTCATTGGAGTACTCCGAG...ACCCACAGCCTCTGTTCTAGAGATGCTTGTATAGGCTGTTAATTGTGATGAATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR GCA 90 bp AAATGGAGATTGGGAAGGGGCCTGATTAGAATAGAAACTGATGATGTTGGTTCATGCAGGTGTTCTATCTaGTCCTCTGCCTGCCGAATG +
Preference number: 4 (lower is better)
Translates to: KWRLGRGLIRIETDDVGSCRCSI*SSACRM
Trigger: CATTCGGCAGGCAGAGGAGCAGATAGAACACCTGCA...TGAACCAACATCATCAGTTTCTATTCTAATCAGGCCCCTTCCCAATCTCCATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR GCA 90 bp GGCCGAGGGTTGAACGTTTATTCATCACAATTAACAGCCTATACAAGCATCTCTGCACTTGGTAAGGACTaGATCCTTCTTGCGGGTGTT +
Preference number: 4 (lower is better)
Translates to: GRGLNVYSSQLTAYTSISALGKD*ILLAGV
Trigger: AACACCCGCAAGAAGGATGCAGTCCTTACCAAGTGC...AGAGATGCTTGTATAGGCTGTTAATTGTGATGAATAAACGTTCAACCCTCGGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324685.11
ENST00000357890.9
CDS-3UTR GCA 90 bp TTTTCCTTAGGGTTAGGATGCATCCACGGAGACAGACAGGTTAGGGCCAGTTTCTATCTAGAGAGACGATaGGGAATTACTTGGCATCTA +
Preference number: 4 (lower is better)
Translates to: FSLGLGCIHGDRQVRASFYLERR*GITWHL
Trigger: TAGATGCCAAGTAATTCCGCATCGTCTCTCTAGATA...GAAACTGGCCCTAACCTGTCTGTCTCCGTGGATGCATCCTAACCCTAAGGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324685.11
CDS-3UTR TCA 90 bp TTGGGAAGGGGCCTGATTAGAATAGAAACTGATGATGTTGGTTCAGCACCTGCAAGTTTCAGGTTCAGCTaGTGTAGATACGATGGAAGT +
Preference number: 4 (lower is better)
Translates to: LGRGLIRIETDDVGSAPASFRFS*CRYDGS
Trigger: ACTTCCATCGTATCTACATCAGCTGAACCTGAAACT...TGCAGGTGCTGAACCAACATCATCAGTTTCTATTCTAATCAGGCCCCTTCCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
ENST00000602784.1
CDS-3UTR TCA 90 bp GGCCGAGGGTTGAACGTTTATTCATCACAATTAACAGCCTATACAAGCATCTCTCTGCAGGCCGAGGGTTaGACGTTTATTCATCACAAT +
Preference number: 4 (lower is better)
Translates to: GRGLNVYSSQLTAYTSISLQAEG*TFIHHN
Trigger: ATTGTGATGAATAAACGTTCAACCCTCGGCCTGCAG...AGAGATGCTTGTATAGGCTGTTAATTGTGATGAATAAACGTTCAACCCTCGGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324685.11
ENST00000357890.9
CDS-3UTR GCA 90 bp GGCCGAGGGTTGAACGTTTATTCATCACAATTAACAGCCTATACAAGCATCTCTTGCTTATTGAGCTTTTaGTCTCGCTTCCGCAGCTTC +
Preference number: 4 (lower is better)
Translates to: GRGLNVYSSQLTAYTSISCLLSF*SRFRSF
Trigger: GAAGCTGCGGAAGCGAGAGCAAAAGCTCAATAAGCA...AGAGATGCTTGTATAGGCTGTTAATTGTGATGAATAAACGTTCAACCCTCGGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324685.11
ENST00000357890.9
CDS-3UTR GCA 90 bp TGCAGGCCGAGGGTTGAACGTTTATTCATCACAATTAACAGCCTATACAAGCATTCTGCTCAAACTCGATaGGCAGCATCTCATACTCCT +
Preference number: 4 (lower is better)
Translates to: CRPRVERLFITINSLYKHSAQTR*AASHTP
Trigger: AGGAGTATGAGATGCTGCGCATCGAGTTTGAGCAGA...ATGCTTGTATAGGCTGTTAATTGTGATGAATAAACGTTCAACCCTCGGCCTGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324685.11
ENST00000357890.9
CDS-3UTR GCA 90 bp TATTCATCACAATTAACAGCCTATACAAGCATCTCTAGAACAGAGGCTGTGGGTTCCTTAGGGTTAGGATaGATCCACGGAGACAGACAG +
Preference number: 4 (lower is better)
Translates to: YSSQLTAYTSISRTEAVGSLGLG*IHGDRQ
Trigger: CTGTCTGTCTCCGTGGATGCATCCTAACCCTAAGGA...ACCCACAGCCTCTGTTCTAGAGATGCTTGTATAGGCTGTTAATTGTGATGAATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
ENST00000602784.1
CDS-3UTR CCA 90 bp AAATGGAGATTGGGAAGGGGCCTGATTAGAATAGAAACTGATGATGTTGGTTCATATCCCGCTGCTCCTTaGGCGCTGACTTGTACATAT +
Preference number: 4 (lower is better)
Translates to: KWRLGRGLIRIETDDVGSYPAAP*ALTCTY
Trigger: ATATGTACAAGTCAGCGCCCAAGGAGCAGCGGGATA...TGAACCAACATCATCAGTTTCTATTCTAATCAGGCCCCTTCCCAATCTCCATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR CCA 90 bp AAATGGAGATTGGGAAGGGGCCTGATTAGAATAGAAACTGATGATGTTGGTTCATCCTTGATCTCCTCCTaGAGGATTTCGTCGGCATCT +
Preference number: 4 (lower is better)
Translates to: KWRLGRGLIRIETDDVGSSLISS*RISSAS
Trigger: AGATGCCGACGAAATCCTCCAGGAGGAGATCAAGGA...TGAACCAACATCATCAGTTTCTATTCTAATCAGGCCCCTTCCCAATCTCCATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR GCA 90 bp AAATGGAGATTGGGAAGGGGCCTGATTAGAATAGAAACTGATGATGTTGGTTCATGCTTATTGAGCTTTTaGTCTCGCTTCCGCAGCTTC +
Preference number: 4 (lower is better)
Translates to: KWRLGRGLIRIETDDVGSCLLSF*SRFRSF
Trigger: GAAGCTGCGGAAGCGAGAGCAAAAGCTCAATAAGCA...TGAACCAACATCATCAGTTTCTATTCTAATCAGGCCCCTTCCCAATCTCCATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS CCA 90 bp GCCGGCGGCGCGTTTGTTGCCTGGCCCAGACATGGCCGCGGCGGCTaGAGCGATGCAGGGTCCCCTGAGGGGCGTCAAACGGGAGGAGGC +
Preference number: 5 (lower is better)
Translates to: AGGAFVAWPRHGRGG*SDAGSPEGRQTGGG
Trigger: GCCTCCTCCCGTTTGACGCCCCTCAGGGGACCCTGCATCGCTCCAGCCGCCGCGGCCATGTCTGGGCCAGGCAACAAACGCGCCGCCGGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000493683.5
ENST00000563683.5
ENST00000563909.5
ENST00000566811.5
CDS-3UTR CAA 90 bp CTCTGGCGCCAGCCCCAGTCCTGCCTCGGTGAAGGATCCGCCCGGGGCGCCTGCTCGCCGGCGGCGCGTTaGTTGCCTGGCCCAGACATG +
Preference number: 5 (lower is better)
Translates to: LWRQPQSCLGEGSARGACSPAAR*LPGPDM
Trigger: CATGTCTGGGCCAGGCAACAAACGCGCCGCCGGCGA...GCAGGCGCCCCGGGCGGATCCTTCACCGAGGCAGGACTGGGGCTGGCGCCAGAG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324685.11
CDS-3UTR CAA 90 bp GCCCGAGGAGTCCCGGCATCCCCCGGCCATGACAGCCAAGGACGTGGTCAGACCCCGGCGGCGCGTTTGTaGCCTGGCCCAGACATGGCC +
Preference number: 5 (lower is better)
Translates to: ARGVPASPGHDSQGRGQTPAARL*PGPDMA
Trigger: GGCCATGTCTGGGCCAGGCAACAAACGCGCCGCCGG...GGTCTGACCACGTCCTTGGCTGTCATGGCCGGGGGATGCCGGGACTCCTCGGGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324685.11
CDS TCA 90 bp CTGGCCCAGACATGGCCGCGGCGGCTGGAGCGATGCAGGGTCCCCTaGGGGGCGTCAAACGGGAGGAGGCGGTACTTCCGTCACCAGCAG +
Preference number: 5 (lower is better)
Translates to: LAQTWPRRLERCRVP*GASNGRRRYFRHQQ
Trigger: CTGCTGGTGACGGAAGTACCGCCTCCTCCCGTTTGACGCCCCTCAGGGGACCCTGCATCGCTCCAGCCGCCGCGGCCATGTCTGGGCCAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000493683.5
ENST00000563683.5
CDS TCA 90 bp CTGGCCCAGACATGGCCGCGGCGGCTGGAGCGATGCAGGGTCCCCTaGGGGGCGTCAAACGGGAGGAGGCGGTACTTCCGTCACCTGCTG +
Preference number: 5 (lower is better)
Translates to: LAQTWPRRLERCRVP*GASNGRRRYFRHLL
Trigger: CAGCAGGTGACGGAAGTACCGCCTCCTCCCGTTTGACGCCCCTCAGGGGACCCTGCATCGCTCCAGCCGCCGCGGCCATGTCTGGGCCAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566811.5
CDS-3UTR CAA 90 bp CCGCACCGGCTCTGGCGCCAGCCCCAGTCCTGCCTCGGTGAAGGATCCGCCCGGTCTCGAAGCTTCCGCTaGTATCGCTGGGCGTCCCCT +
Preference number: 5 (lower is better)
Translates to: PHRLWRQPQSCLGEGSARSRSFR*YRWASP
Trigger: AGGGGACGCCCAGCGATACAAGCGGAAGCTTCGAGA...CCGGGCGGATCCTTCACCGAGGCAGGACTGGGGCTGGCGCCAGAGCCGGTGCGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324685.11
CDS-3UTR CAA 90 bp GCCCGAGGTCACCGTGGCGGCCCGCGTCTCCTTCTCCAGTTCGTCCTGGTCCAGGCCTCCTCCTCCTGCTaGGTGGCACCCAGCTTGCGC +
Preference number: 5 (lower is better)
Translates to: ARGHRGGPRLLLQFVLVQASSSC*VAPSLR
Trigger: GCGCAAGCTGGGTGCCACCAAGCAGGAGGAGGAGGC...CTGGACCAGGACGAACTGGAGAAGGAGACGCGGGCCGCCACGGTGACCTCGGGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324685.11
CDS TCA 90 bp CTGGCCCAGACATGGCCGCGGCGGCTGGAGCGATGCAGGGTCCCCTaGGGGGCGTCAAACGGGAGGAGGCGGTACTTCCGTCACCTGGAA +
Preference number: 5 (lower is better)
Translates to: LAQTWPRRLERCRVP*GASNGRRRYFRHLE
Trigger: TTCCAGGTGACGGAAGTACCGCCTCCTCCCGTTTGACGCCCCTCAGGGGACCCTGCATCGCTCCAGCCGCCGCGGCCATGTCTGGGCCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000563909.5
CDS-3UTR CAA 90 bp GGGCGCCGCTCGGTACACGCCGCACCGCTCCCGAGGCCGATTGCAACGAGGGAAGAACTCCATTCGGCCTaGCAGCTCCAGCTCCACCTC +
Preference number: 5 (lower is better)
Translates to: GRRSVHAAPLPRPIATREELHSA*QLQLHL
Trigger: GAGGTGGAGCTGGAGCTGCAAGGCCGAATGGAGTTC...TTCCCTCGTTGCAATCGGCCTCGGGAGCGGTGCGGCGTGTACCGAGCGGCGCCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324685.11
CDS-3UTR CAA 90 bp CCGCACCGGCTCTGGCGCCAGCCCCAGTCCTGCCTCGGTGAAGGATCCGCCCGGGCAAGTCCTCCACTGTaGTCTCCATCTCCAGCACCT +
Preference number: 5 (lower is better)
Translates to: PHRLWRQPQSCLGEGSARASPPL*SPSPAP
Trigger: AGGTGCTGGAGATGGAGACAACAGTGGAGGACTTGC...CCGGGCGGATCCTTCACCGAGGCAGGACTGGGGCTGGCGCCAGAGCCGGTGCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324685.11
CDS-3UTR CAA 90 bp AGGATGCAGCCCGAGGAGTCCCGGCATCCCCCGGCCATGACAGCCAAGGACGTGAAGGCCGCGTTGCACTaGGGGCACTTCCTCTGGCGG +
Preference number: 5 (lower is better)
Translates to: RMQPEESRHPPAMTAKDVKAALH*GHFLWR
Trigger: CCGCCAGAGGAAGTGCCCCAAGTGCAACGCGGCCTT...CACGTCCTTGGCTGTCATGGCCGGGGGATGCCGGGACTCCTCGGGCTGCATCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324685.11
CDS GCA 90 bp AGGCAGGGCTGGATCTCCCGCAGCCGAGTCTGCACGTGCTCCAGCTaGACCTTCAGGTCCTCGGCCAGCTGGGCGGCTTCTACAGCCTTC +
Preference number: 5 (lower is better)
Translates to: RQGWISRSRVCTCSS*TFRSSASWAASTAF
Trigger: GAAGGCTGTAGAAGCCGCCCAGCTGGCCGAGGACCTGAAGGTGCAGCTGGAGCACGTGCAGACTCGGCTGCGGGAGATCCAGCCCTGCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000493683.5
ENST00000563683.5
ENST00000567365.2
CDS CCA 90 bp AGCTGGGCGGCTTCTACAGCCTTCCGCTTGTTGAGCTCCAGGGCTTaGCTGCGCAGCGTCAGCTCCTTCTCCACACCCCCGAGGCTGCCC +
Preference number: 5 (lower is better)
Translates to: SWAASTAFRLLSSRA*LRSVSSFSTPPRLP
Trigger: GGGCAGCCTCGGGGGTGTGGAGAAGGAGCTGACGCTGCGCAGCCAAGCCCTGGAGCTCAACAAGCGGAAGGCTGTAGAAGCCGCCCAGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000493683.5
ENST00000563683.5
ENST00000567365.2
CDS-3UTR CAA 90 bp GGGCGCCGCTCGGTACACGCCGCACCGCTCCCGAGGCCGATTGCAACGAGGGAACAGGTCAACCGCGCCTaGTACTCCTTGATCTCCTCC +
Preference number: 5 (lower is better)
Translates to: GRRSVHAAPLPRPIATREQVNRA*YSLISS
Trigger: GGAGGAGATCAAGGAGTACAAGGCGCGGTTGACCTG...TTCCCTCGTTGCAATCGGCCTCGGGAGCGGTGCGGCGTGTACCGAGCGGCGCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324685.11
CDS CCA 90 bp GATCAGCCCTTGAGAGAGCGGAGGCTACAGGTGGAGGTCCTAGGCTaGGACCTTCCCGTTCCCGAAGCTCCCGCTTGGGCCTGGCCTCAG +
Preference number: 5 (lower is better)
Translates to: DQPLRERRLQVEVLG*DLPVPEAPAWAWPQ
Trigger: CTGAGGCCAGGCCCAAGCGGGAGCTTCGGGAACGGGAAGGTCCCAGCCTAGGACCTCCACCTGTAGCCTCCGCTCTCTCAAGGGCTGATC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000493683.5
ENST00000563683.5
ENST00000564260.1
CDS-3UTR CAA 90 bp ATCCTTCTTGCGGGTGTTACAGCAGGGGCAGGTCAACCGCGCCTGGGCCAGGCAGTTGAGCTCCAGGGCTaGGCTGCGCAGCGTCAGCTC +
Preference number: 5 (lower is better)
Translates to: ILLAGVTAGAGQPRLGQAVELQG*AAQRQL
Trigger: GAGCTGACGCTGCGCAGCCAAGCCCTGGAGCTCAAC...TGCCTGGCCCAGGCGCGGTTGACCTGCCCCTGCTGTAACACCCGCAAGAAGGAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567365.2
CDS-3UTR CAA 90 bp CTGCAGCTCCAACCCTCTGGCCTCTCCGGGCACTGCCCTCACAGCCGATGGAGCCTCTGCTTTTCCAGCTaGCGCCGCAGCCGTGAGATG +
Preference number: 5 (lower is better)
Translates to: LQLQPSGLSGHCPHSRWSLCFSS*RRSREM
Trigger: CATCTCACGGCTGCGGCGCAAGCTGGAAAAGCAGAG...GCTCCATCGGCTGTGAGGGCAGTGCCCGGAGAGGCCAGAGGGTTGGAGCTGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR CAA 90 bp CTGAGAAGCGGTCCGCAGGATCCAGTTCAGGCCGGCCTTTGGCCAGCGCAACCGGCACCAAAGGCCGCGTaGCACTTGGGGCACTTCCTC +
Preference number: 5 (lower is better)
Translates to: LRSGPQDPVQAGLWPAQPAPKAA*HLGHFL
Trigger: GAGGAAGTGCCCCAAGTGCAACGCGGCCTTTGGTGC...CGGTTGCGCTGGCCAAAGGCCGGCCTGAACTGGATCCTGCGGACCGCTTCTCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324685.11
CDS GCA 90 bp CCCCCGAGGCTGCCCTGCAAGGCTCGCTCCTTCTCCTCTAGCTTCTaGACAGTCAGCAGCTGGGCATCCACCTGGGACTTGAGGCCAAGG +
Preference number: 5 (lower is better)
Translates to: PPRLPCKARSFSSSF*TVSSWASTWDLRPR
Trigger: CCTTGGCCTCAAGTCCCAGGTGGATGCCCAGCTGCTGACTGTGCAGAAGCTAGAGGAGAAGGAGCGAGCCTTGCAGGGCAGCCTCGGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
ENST00000567365.2
CDS GCA 90 bp GGGCTTGGCTGCGCAGCGTCAGCTCCTTCTCCACACCCCCGAGGCTaGCCTGCAAGGCTCGCTCCTTCTCCTCTAGCTTCTGCACAGTCA +
Preference number: 5 (lower is better)
Translates to: GLGCAASAPSPHPRG*PARLAPSPLASAQS
Trigger: TGACTGTGCAGAAGCTAGAGGAGAAGGAGCGAGCCTTGCAGGGCAGCCTCGGGGGTGTGGAGAAGGAGCTGACGCTGCGCAGCCAAGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000493683.5
ENST00000563683.5
ENST00000567365.2
CDS CCA 90 bp TGCAGCCCCAGCTCGTCGCTCTCCATGTGCTCGATGTGTCGCAGGTaGGAGTTCTTTGTGGCCAGCAGCAGGCCCCGAGCCTCGTCTAGC +
Preference number: 5 (lower is better)
Translates to: CSPSSSLSMCSMCRR*EFFVASSRPRASSS
Trigger: GCTAGACGAGGCTCGGGGCCTGCTGCTGGCCACAAAGAACTCCCACCTGCGACACATCGAGCACATGGAGAGCGACGAGCTGGGGCTGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000493683.5
ENST00000563683.5
CDS CCA 90 bp AAGCTCTCTTTCTCACGAGCAGCCCGGCTCTCTGCCAGGCAGGGCTaGATCTCCCGCAGCCGAGTCTGCACGTGCTCCAGCTGCACCTTC +
Preference number: 5 (lower is better)
Translates to: KLSFSRAARLSARQG*ISRSRVCTCSSCTF
Trigger: GAAGGTGCAGCTGGAGCACGTGCAGACTCGGCTGCGGGAGATCCAGCCCTGCCTGGCAGAGAGCCGGGCTGCTCGTGAGAAAGAGAGCTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000493683.5
ENST00000563683.5
ENST00000567365.2
CDS CCA 90 bp CCCCACCTCTCCAGCTCCAGTCTGCAAGCTGGCGGCGGCCATACCTaGGACTTGAGGCCAAGGACCTGCTCGCCCAACTCATCCTTCTCC +
Preference number: 5 (lower is better)
Translates to: PHLSSSSLQAGGGHT*DLRPRTCSPNSSFS
Trigger: GGAGAAGGATGAGTTGGGCGAGCAGGTCCTTGGCCTCAAGTCCCAGGTATGGCCGCCGCCAGCTTGCAGACTGGAGCTGGAGAGGTGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493683.5
CDS-3UTR CAA 90 bp GCAGGCAGACAGGACACAGGCTCAGTCACAGGGTGTCAGGGGGAAGCTCTTCTACCGGCGGCGCGTTTGTaGCCTGGCCCAGACATGGCC +
Preference number: 5 (lower is better)
Translates to: AGRQDTGSVTGCQGEALLPAARL*PGPDMA
Trigger: GGCCATGTCTGGGCCAGGCAACAAACGCGCCGCCGG...TAGAAGAGCTTCCCCCTGACACCCTGTGACTGAGCCTGTGTCCTGTCTGCCTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR CAA 90 bp CCCCCATCTGCCAAGAGGGTACCTCCTTCAGCCCTTGGCACAAGAGCCAGACCATCGCCGGCGGCGCGTTaGTTGCCTGGCCCAGACATG +
Preference number: 5 (lower is better)
Translates to: PPSAKRVPPSALGTRARPSPAAR*LPGPDM
Trigger: CATGTCTGGGCCAGGCAACAAACGCGCCGCCGGCGA...TGGTCTGGCTCTTGTGCCAAGGGCTGAAGGAGGTACCCTCTTGGCAGATGGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR CAA 90 bp AGCTCCAACCCTCTGGCCTCTCCGGGCACTGCCCTCACAGCCGATGGAGCATGGTTCACAAGCCTGCCGTaGTTCCAGCCGCTCTGCCAG +
Preference number: 5 (lower is better)
Translates to: SSNPLASPGTALTADGAWFTSLP*FQPLCQ
Trigger: CTGGCAGAGCGGCTGGAACAACGGCAGGCTTGTGAA...CCATGCTCCATCGGCTGTGAGGGCAGTGCCCGGAGAGGCCAGAGGGTTGGAGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR CAA 90 bp AGGGAACTCCACAGGACAGAAGCCCTGCCGAGGTTAGGGGGATGGTGGGTGAAGCTCCGCAGGGCCACCTaGAGGCGCTCATTGGTCCGC +
Preference number: 5 (lower is better)
Translates to: RELHRTEALPRLGGWWVKLRRAT*RRSLVR
Trigger: GCGGACCAATGAGCGCCTCAAGGTGGCCCTGCGGAG...CTTCACCCACCATCCCCCTAACCTCGGCAGGGCTTCTGTCCTGTGGAGTTCCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324685.11
CDS-3UTR CAA 90 bp CTGCAGCTCCAACCCTCTGGCCTCTCCGGGCACTGCCCTCACAGCCGATGGAGCTTGGTGGCACCCAGCTaGCGCTGCAGGTGTTCTATC +
Preference number: 5 (lower is better)
Translates to: LQLQPSGLSGHCPHSRWSLVAPS*RCRCSI
Trigger: GATAGAACACCTGCAGCGCAAGCTGGGTGCCACCAA...GCTCCATCGGCTGTGAGGGCAGTGCCCGGAGAGGCCAGAGGGTTGGAGCTGCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR CAA 90 bp CTGAGAAGCGGTCCGCAGGATCCAGTTCAGGCCGGCCTTTGGCCAGCGCAACCGCTCTGCTTTTCCAGCTaGCGCCGCAGCCGTGAGATG +
Preference number: 5 (lower is better)
Translates to: LRSGPQDPVQAGLWPAQPLCFSS*RRSREM
Trigger: CATCTCACGGCTGCGGCGCAAGCTGGAAAAGCAGAG...CGGTTGCGCTGGCCAAAGGCCGGCCTGAACTGGATCCTGCGGACCGCTTCTCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324685.11
CDS-3UTR CAA 90 bp TCTTGCGGGTGTTACAGCAGGGGCAGGTCAACCGCGCCTGGGCCAGGCAAAGGCCTCTGCTTTTCCAGCTaGCGCCGCAGCCGTGAGATG +
Preference number: 5 (lower is better)
Translates to: SCGCYSRGRSTAPGPGKGLCFSS*RRSREM
Trigger: CATCTCACGGCTGCGGCGCAAGCTGGAAAAGCAGAG...GCCTTTGCCTGGCCCAGGCGCGGTTGACCTGCCCCTGCTGTAACACCCGCAAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567365.2
CDS-3UTR CAA 90 bp CCGCTCGGTACACGCCGCACCGCTCCCGAGGCCGATTGCAACGAGGGAAGTCACAGGACTGCATCCTTCTaGCGGGTGTTACAGCAGGGG +
Preference number: 5 (lower is better)
Translates to: PLGTRRTAPEADCNEGSHRTASF*RVLQQG
Trigger: CCCCTGCTGTAACACCCGCAAGAAGGATGCAGTCCT...GTGACTTCCCTCGTTGCAATCGGCCTCGGGAGCGGTGCGGCGTGTACCGAGCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324685.11
CDS TCA 90 bp TCTCCAGCTCCAGTCTGCAAGCTGGCGGCGGCCATACCTGGGACTTaGGGCCAAGGACCTGCTCGCCCAACTCATCCTTCTCCTCCCGCA +
Preference number: 5 (lower is better)
Translates to: SPAPVCKLAAAIPGT*GQGPARPTHPSPPA
Trigger: TGCGGGAGGAGAAGGATGAGTTGGGCGAGCAGGTCCTTGGCCTCAAGTCCCAGGTATGGCCGCCGCCAGCTTGCAGACTGGAGCTGGAGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493683.5
CDS GCA 90 bp CTGCCTGCCGAATGCGCCGCAGGGCATCCTCATCCGCGATCTTCTTaGTCTCCCTTCGATCCCTCTCCTCCAATTCCCGGATGCGGCTCC +
Preference number: 5 (lower is better)
Translates to: LPAECAAGHPHPRSS*SPFDPSPPIPGCGS
Trigger: GGAGCCGCATCCGGGAATTGGAGGAGAGGGATCGAAGGGAGAGCAAGAAGATCGCGGATGAGGATGCCCTGCGGCGCATTCGGCAGGCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000493683.5
ENST00000563683.5
CDS GCA 90 bp CCTCTTGAGGTTGAAGCTCTCTTTCTCACGAGCAGCCCGGCTCTCTaGCAGGCAGGGCTGGATCTCCCGCAGCCGAGTCTGCACGTGCTC +
Preference number: 5 (lower is better)
Translates to: PLEVEALFLTSSPAL*QAGLDLPQPSLHVL
Trigger: GAGCACGTGCAGACTCGGCTGCGGGAGATCCAGCCCTGCCTGGCAGAGAGCCGGGCTGCTCGTGAGAAAGAGAGCTTCAACCTCAAGAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000493683.5
ENST00000563683.5
ENST00000567365.2
CDS CCA 90 bp GTCCCAGGTGCCTCAGGCGCTGAAGACAGCTCCCCCTGGCTCTCATaGCATCGGAGAAGGGCTTCCACAGTTTCATCCAGCTGGGCCCAG +
Preference number: 5 (lower is better)
Translates to: VPGASGAEDSSPWLS*HRRRASTVSSSWAQ
Trigger: CTGGGCCCAGCTGGATGAAACTGTGGAAGCCCTTCTCCGATGCCATGAGAGCCAGGGGGAGCTGTCTTCAGCGCCTGAGGCACCTGGGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000493683.5
ENST00000563683.5
ENST00000565931.1
ENST00000566811.5
CDS CCA 90 bp TGTAGATACGATGGAAGTCGTGGGCACCAAAGGCCGCGTTGCACTTaGGGCACTTCCTCTGGCGGGCCTCATAGCGGCCCCGCACGCACT +
Preference number: 5 (lower is better)
Translates to: CRYDGSRGHQRPRCT*GTSSGGPHSGPART
Trigger: AGTGCGTGCGGGGCCGCTATGAGGCCCGCCAGAGGAAGTGCCCCAAGTGCAACGCGGCCTTTGGTGCCCACGACTTCCATCGTATCTACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000493683.5
ENST00000563683.5
CDS CCA 90 bp CGCCTGTTCCAGGGCCATACCTCCATGTGCTCGATGTGTCGCAGGTaGGAGTTCTTTGTGGCCAGCAGCAGGCCCCGAGCCTCGTCTAGC +
Preference number: 5 (lower is better)
Translates to: RLFQGHTSMCSMCRR*EFFVASSRPRASSS
Trigger: GCTAGACGAGGCTCGGGGCCTGCTGCTGGCCACAAAGAACTCCCACCTGCGACACATCGAGCACATGGAGGTATGGCCCTGGAACAGGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566703.1
CDS-3UTR CAA 90 bp GTGCGCGGCCTGGCTACTCTGGCTGCAGGCCGAGGGTTGAACGTTTATTCATCATCGCCGGCGGCGCGTTaGTTGCCTGGCCCAGACATG +
Preference number: 5 (lower is better)
Translates to: VRGLATLAAGRGLNVYSSSPAAR*LPGPDM
Trigger: CATGTCTGGGCCAGGCAACAAACGCGCCGCCGGCGA...TGATGAATAAACGTTCAACCCTCGGCCTGCAGCCAGAGTAGCCAGGCCGCGCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324685.11
ENST00000357890.9
CDS-3UTR CAA 90 bp AAGAGGGTACCTCCTTCAGCCCTTGGCACAAGAGCCAGACCAAGGTGTCCAGGGGCCTCCTCCTCCTGCTaGGTGGCACCCAGCTTGCGC +
Preference number: 5 (lower is better)
Translates to: KRVPPSALGTRARPRCPGASSSC*VAPSLR
Trigger: GCGCAAGCTGGGTGCCACCAAGCAGGAGGAGGAGGC...CCCTGGACACCTTGGTCTGGCTCTTGTGCCAAGGGCTGAAGGAGGTACCCTCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR CAA 90 bp CTCCGGGCACTGCCCTCACAGCCGATGGAGCATGGCTGGGCAGGCAGACAGGACTACCTCCTTCAGCCCTaGGCACAAGAGCCAGACCAA +
Preference number: 5 (lower is better)
Translates to: LRALPSQPMEHGWAGRQDYLLQP*AQEPDQ
Trigger: TTGGTCTGGCTCTTGTGCCAAGGGCTGAAGGAGGTA...GTCCTGTCTGCCTGCCCAGCCATGCTCCATCGGCTGTGAGGGCAGTGCCCGGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
ENST00000602784.1
CDS-3UTR CAA 90 bp GCCGAGGTTAGGGGGATGGTGGGTGAAGGAAAGTCTTCCTGGGGCCTGCAGCCCTGGAATGATTGGAAGTaGGCCCAGCGGCTGGGGCTG +
Preference number: 5 (lower is better)
Translates to: AEVRGMVGEGKSSWGLQPWNDWK*AQRLGL
Trigger: CAGCCCCAGCCGCTGGGCCAACTTCCAATCATTCCA...GGGCTGCAGGCCCCAGGAAGACTTTCCTTCACCCACCATCCCCCTAACCTCGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
ENST00000602784.1
CDS TCA 90 bp CGCAACTTCTCACGTATCTGCGCGTTCTCTTCGCTCCCACTGGCGTaGGCCTGCGCTTTCCGCCTTCCTTCCCTCACAAGCCCCCTTGGC +
Preference number: 5 (lower is better)
Translates to: RNFSRICAFSSLPLA*ACAFRLPSLTSPLG
Trigger: GCCAAGGGGGCTTGTGAGGGAAGGAAGGCGGAAAGCGCAGGCTCACGCCAGTGGGAGCGAAGAGAACGCGCAGATACGTGAGAAGTTGCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000563909.5
CDS CCA 90 bp GCACTCGCAACTTCTCACGTATCTGCGCGTTCTCTTCGCTCCCACTaGCGTGAGCCTGCGCTTTCCGCCTTCCTTCCCTCACAAGCCCCC +
Preference number: 5 (lower is better)
Translates to: ALATSHVSARSLRSH*REPALSAFLPSQAP
Trigger: GGGGGCTTGTGAGGGAAGGAAGGCGGAAAGCGCAGGCTCACGCCAGTGGGAGCGAAGAGAACGCGCAGATACGTGAGAAGTTGCGAGTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563909.5
CDS-3UTR CAA 90 bp GCATCCACGGAGACAGACAGGTTAGGGCCAGTTTCCGGGAAGCTCAGTCAAGTGGGCCCCGCCTGCTCGTaGGCCGCCAGATTCTGCTCA +
Preference number: 5 (lower is better)
Translates to: ASTETDRLGPVSGKLSQVGPACS*AARFCS
Trigger: TGAGCAGAATCTGGCGGCCAACGAGCAGGCGGGGCC...CACTTGACTGAGCTTCCCGGAAACTGGCCCTAACCTGTCTGTCTCCGTGGATGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR CAA 90 bp GCCGAGGTTAGGGGGATGGTGGGTGAAGGAAAGTCTTCCTGGGGCCTGCAGCCCTTGGTGGCACCCAGCTaGCGCTGCAGGTGTTCTATC +
Preference number: 5 (lower is better)
Translates to: AEVRGMVGEGKSSWGLQPLVAPS*RCRCSI
Trigger: GATAGAACACCTGCAGCGCAAGCTGGGTGCCACCAA...GGGCTGCAGGCCCCAGGAAGACTTTCCTTCACCCACCATCCCCCTAACCTCGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR CAA 90 bp GCATCCACGGAGACAGACAGGTTAGGGCCAGTTTCCGGGAAGCTCAGTCAAGTGGCCTCCTCCTCCTGCTaGGTGGCACCCAGCTTGCGC +
Preference number: 5 (lower is better)
Translates to: ASTETDRLGPVSGKLSQVASSSC*VAPSLR
Trigger: GCGCAAGCTGGGTGCCACCAAGCAGGAGGAGGAGGC...CACTTGACTGAGCTTCCCGGAAACTGGCCCTAACCTGTCTGTCTCCGTGGATGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR CAA 90 bp CTTCTTGCGGGTGTTACAGCAGGGGCAGGTCAACCGCGCCTGGGCCAGGCAAAGTCTACAGCCTTCCGCTaGTTGAGCTCCAGGGCTTGG +
Preference number: 5 (lower is better)
Translates to: LLAGVTAGAGQPRLGQAKSTAFR*LSSRAW
Trigger: CCAAGCCCTGGAGCTCAACAAGCGGAAGGCTGTAGA...CTTTGCCTGGCCCAGGCGCGGTTGACCTGCCCCTGCTGTAACACCCGCAAGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567365.2
CDS-3UTR CAA 90 bp GAGGGTACCTCCTTCAGCCCTTGGCACAAGAGCCAGACCAAGGTGTCCAGGGAAAAGGCCGCGTTGCACTaGGGGCACTTCCTCTGGCGG +
Preference number: 5 (lower is better)
Translates to: EGTSFSPWHKSQTKVSREKAALH*GHFLWR
Trigger: CCGCCAGAGGAAGTGCCCCAAGTGCAACGCGGCCTT...TTCCCTGGACACCTTGGTCTGGCTCTTGTGCCAAGGGCTGAAGGAGGTACCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR CAA 90 bp CTGCAGCTCCAACCCTCTGGCCTCTCCGGGCACTGCCCTCACAGCCGATGGAGCAAGATGGAACGAAGCTaGGCTGATCCCATGCCCACT +
Preference number: 5 (lower is better)
Translates to: LQLQPSGLSGHCPHSRWSKMERS*ADPMPT
Trigger: AGTGGGCATGGGATCAGCCAAGCTTCGTTCCATCTT...GCTCCATCGGCTGTGAGGGCAGTGCCCGGAGAGGCCAGAGGGTTGGAGCTGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS TCA 90 bp CTGTGCGTAGCTTCTTCTGCAGCCCCAGCTCGTCGCTCTGTGGGTTaGTGTGTTAAGGACCCACACAGCCCCTCGGTCCCACCTCAGGAC +
Preference number: 5 (lower is better)
Translates to: LCVASSAAPARRSVG*CVKDPHSPSVPPQD
Trigger: GTCCTGAGGTGGGACCGAGGGGCTGTGTGGGTCCTTAACACATCAACCCACAGAGCGACGAGCTGGGGCTGCAGAAGAAGCTACGCACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566703.1
CDS GCA 90 bp TCTACCACACGAGACACAGCTGCCTTGGAGAACTCCATTCGGCCTTaGAGCTCCAGCTCCACCTCCTCACTGCTGCTGGCACCCAGTGCC +
Preference number: 5 (lower is better)
Translates to: STTRDTAALENSIRP*SSSSTSSLLLAPSA
Trigger: GGCACTGGGTGCCAGCAGCAGTGAGGAGGTGGAGCTGGAGCTGCAAGGCCGAATGGAGTTCTCCAAGGCAGCTGTGTCTCGTGTGGTAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000493683.5
ENST00000563683.5
CDS CCA 90 bp CGTCGCTCTCCATGTGCTCGATGTGTCGCAGGTGGGAGTTCTTTGTaGCCAGCAGCAGGCCCCGAGCCTCGTCTAGCTGGGTCTTCACTT +
Preference number: 5 (lower is better)
Translates to: RRSPCARCVAGGSSL*PAAGPEPRLAGSSL
Trigger: AAGTGAAGACCCAGCTAGACGAGGCTCGGGGCCTGCTGCTGGCCACAAAGAACTCCCACCTGCGACACATCGAGCACATGGAGAGCGACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000493683.5
ENST00000563683.5
CDS CCA 90 bp GCATCCTTCTTGCGGGTGTTACAGCAGGGGCAGGTCAACCGCGCCTaGGCCAGGCAAAGGCATCAGCTTGGGAACAACTCTGACAGTGCC +
Preference number: 5 (lower is better)
Translates to: ASFLRVLQQGQVNRA*ARQRHQLGNNSDSA
Trigger: GGCACTGTCAGAGTTGTTCCCAAGCTGATGCCTTTGCCTGGCCCAGGCGCGGTTGACCTGCCCCTGCTGTAACACCCGCAAGAAGGATGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567365.2
CDS CCA 90 bp GCTGTAGGCGGTCTGAGGCCTCTACCACACGAGACACAGCTGCCTTaGAGAACTCCATTCGGCCTTGCAGCTCCAGCTCCACCAGCAGGA +
Preference number: 5 (lower is better)
Translates to: AVGGLRPLPHETQLP*RTPFGLAAPAPPAG
Trigger: TCCTGCTGGTGGAGCTGGAGCTGCAAGGCCGAATGGAGTTCTCCAAGGCAGCTGTGTCTCGTGTGGTAGAGGCCTCAGACCGCCTACAGC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565995.5
CDS-3UTR CAA 90 bp ACAAGCATCTCTAGAACAGAGGCTGTGGGTCCAAACGGGTCCCTGCAGCTCCAATGGCGCATCTCACGGTaGATGGGCCCCGCCTGCTCG +
Preference number: 5 (lower is better)
Translates to: TSISRTEAVGPNGSLQLQWRISR*MGPACS
Trigger: CGAGCAGGCGGGGCCCATCAACCGTGAGATGCGCCA...TTGGAGCTGCAGGGACCCGTTTGGACCCACAGCCTCTGTTCTAGAGATGCTTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR CAA 90 bp CTGAGAAGCGGTCCGCAGGATCCAGTTCAGGCCGGCCTTTGGCCAGCGCAACCGTCTGATTCCTTCCGCTaGGTTTCTTCCACCTTGGCC +
Preference number: 5 (lower is better)
Translates to: LRSGPQDPVQAGLWPAQPSDSFR*VSSTLA
Trigger: GGCCAAGGTGGAAGAAACCAAGCGGAAGGAATCAGA...CGGTTGCGCTGGCCAAAGGCCGGCCTGAACTGGATCCTGCGGACCGCTTCTCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324685.11
CDS-3UTR CAA 90 bp GTCCAGGGAACTCCACAGGACAGAAGCCCTGCCGAGGTTAGGGGGATGGTGGGTTCTACAGCCTTCCGCTaGTTGAGCTCCAGGGCTTGG +
Preference number: 5 (lower is better)
Translates to: VQGTPQDRSPAEVRGMVGSTAFR*LSSRAW
Trigger: CCAAGCCCTGGAGCTCAACAAGCGGAAGGCTGTAGA...ACCCACCATCCCCCTAACCTCGGCAGGGCTTCTGTCCTGTGGAGTTCCCTGGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR CAA 90 bp CCCCCATCTGCCAAGAGGGTACCTCCTTCAGCCCTTGGCACAAGAGCCAGACCACTCTGCTTTTCCAGCTaGCGCCGCAGCCGTGAGATG +
Preference number: 5 (lower is better)
Translates to: PPSAKRVPPSALGTRARPLCFSS*RRSREM
Trigger: CATCTCACGGCTGCGGCGCAAGCTGGAAAAGCAGAG...TGGTCTGGCTCTTGTGCCAAGGGCTGAAGGAGGTACCCTCTTGGCAGATGGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR CAA 90 bp TACCTCCTTCAGCCCTTGGCACAAGAGCCAGACCAAGGTGTCCAGGGAACTCCAAAGGCCGCGTTGCACTaGGGGCACTTCCTCTGGCGG +
Preference number: 5 (lower is better)
Translates to: YLLQPLAQEPDQGVQGTPKAALH*GHFLWR
Trigger: CCGCCAGAGGAAGTGCCCCAAGTGCAACGCGGCCTT...TGGAGTTCCCTGGACACCTTGGTCTGGCTCTTGTGCCAAGGGCTGAAGGAGGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR CAA 90 bp CAAGGACATGGCTCACTGGTCCTCATTTGTGAGCCAGTAGGCAGGGAGCGAGCCGCACCAAAGGCCGCGTaGCACTTGGGGCACTTCCTC +
Preference number: 5 (lower is better)
Translates to: QGHGSLVLICEPVGRERAAPKAA*HLGHFL
Trigger: GAGGAAGTGCCCCAAGTGCAACGCGGCCTTTGGTGC...GGCTCGCTCCCTGCCTACTGGCTCACAAATGAGGACCAGTGAGCCATGTCCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR CAA 90 bp GCCGAGGTTAGGGGGATGGTGGGTGAAGGAAAGTCTTCCTGGGGCCTGCAGCCCTACCTCCTTCAGCCCTaGGCACAAGAGCCAGACCAA +
Preference number: 5 (lower is better)
Translates to: AEVRGMVGEGKSSWGLQPYLLQP*AQEPDQ
Trigger: TTGGTCTGGCTCTTGTGCCAAGGGCTGAAGGAGGTA...GGGCTGCAGGCCCCAGGAAGACTTTCCTTCACCCACCATCCCCCTAACCTCGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
ENST00000602784.1
CDS-3UTR CAA 90 bp AGGTGGCCGCGTCTCTATGATGCAATATCCTGCGTTTTTCCCACCCTCGCACCGCGCTCCCGAGGCCGATaGCAACGAGGGAAGTCACCC +
Preference number: 5 (lower is better)
Translates to: RWPRLYDAISCVFPTLAPRSRGR*QRGKSP
Trigger: GGGTGACTTCCCTCGTTGCAATCGGCCTCGGGAGCG...CGGTGCGAGGGTGGGAAAAACGCAGGATATTGCATCATAGAGACGCGGCCACCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324685.11
CDS TCA 90 bp AGCTCGGAGTACTCCAATGAGATGCGGTGGTGTTTCTCCTGCAGCTaGGTGGCCAAGTCCTGCAGTCGCCGGTTCTCACGGCCCAGCTCT +
Preference number: 5 (lower is better)
Translates to: SSEYSNEMRWCFSCS*VAKSCSRRFSRPSS
Trigger: AGAGCTGGGCCGTGAGAACCGGCGACTGCAGGACTTGGCCACTCAGCTGCAGGAGAAACACCACCGCATCTCATTGGAGTACTCCGAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000493683.5
ENST00000563683.5
ENST00000565995.5
CDS TCA 90 bp AGGCATCAGCTTGGGAACAACTCTGACAGTGCCCAGACCCCAAGCTaGCAGCAGGAGGAGTCCAGGCCAAGCCCACCACACTGGAGACTG +
Preference number: 5 (lower is better)
Translates to: RHQLGNNSDSAQTPS*QQEESRPSPPHWRL
Trigger: CAGTCTCCAGTGTGGTGGGCTTGGCCTGGACTCCTCCTGCTGTCAGCTTGGGGTCTGGGCACTGTCAGAGTTGTTCCCAAGCTGATGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567365.2
CDS GCA 90 bp CTTGCAGAGACTCGTTGTAGAGCAGTGAGAATTGGGCCTGCAGCATaGGGTACTCCCCCGTCTCCCGCACTACCTCCTCAGGAAGGCTCC +
Preference number: 5 (lower is better)
Translates to: LAETRCRAVRIGPAA*GTPPSPALPPQEGS
Trigger: GGAGCCTTCCTGAGGAGGTAGTGCGGGAGACGGGGGAGTACCGCATGCTGCAGGCCCAATTCTCACTGCTCTACAACGAGTCTCTGCAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324685.11
ENST00000493683.5
ENST00000563683.5
ENST00000566703.1
CDS CCA 90 bp GCCATACCTCCATGTGCTCGATGTGTCGCAGGTGGGAGTTCTTTGTaGCCAGCAGCAGGCCCCGAGCCTCGTCTAGCTGGGTCTTCACTT +
Preference number: 5 (lower is better)
Translates to: AIPPCARCVAGGSSL*PAAGPEPRLAGSSL
Trigger: AAGTGAAGACCCAGCTAGACGAGGCTCGGGGCCTGCTGCTGGCCACAAAGAACTCCCACCTGCGACACATCGAGCACATGGAGGTATGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566703.1
CDS-3UTR CAA 90 bp CCGCTCGGTACACGCCGCACCGCTCCCGAGGCCGATTGCAACGAGGGAAGTCACCGCTCTGCCAGTTTCTaGTTCTTGAACTGTAGTACC +
Preference number: 5 (lower is better)
Translates to: PLGTRRTAPEADCNEGSHRSASF*FLNCST
Trigger: GGTACTACAGTTCAAGAACAAGAAACTGGCAGAGCG...GTGACTTCCCTCGTTGCAATCGGCCTCGGGAGCGGTGCGGCGTGTACCGAGCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324685.11
CDS-3UTR CAA 90 bp GAGGGTACCTCCTTCAGCCCTTGGCACAAGAGCCAGACCAAGGTGTCCAGGGAATTCACAAGCCTGCCGTaGTTCCAGCCGCTCTGCCAG +
Preference number: 5 (lower is better)
Translates to: EGTSFSPWHKSQTKVSREFTSLP*FQPLCQ
Trigger: CTGGCAGAGCGGCTGGAACAACGGCAGGCTTGTGAA...TTCCCTGGACACCTTGGTCTGGCTCTTGTGCCAAGGGCTGAAGGAGGTACCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR CAA 90 bp GAGGGTACCTCCTTCAGCCCTTGGCACAAGAGCCAGACCAAGGTGTCCAGGGAAGAACTCCATTCGGCCTaGCAGCTCCAGCTCCACCTC +
Preference number: 5 (lower is better)
Translates to: EGTSFSPWHKSQTKVSREELHSA*QLQLHL
Trigger: GAGGTGGAGCTGGAGCTGCAAGGCCGAATGGAGTTC...TTCCCTGGACACCTTGGTCTGGCTCTTGTGCCAAGGGCTGAAGGAGGTACCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR CAA 90 bp GCCAAGAGGGTACCTCCTTCAGCCCTTGGCACAAGAGCCAGACCAAGGTGTCCAGCCTGGGCCCGGAGCTaGCCAATCTCAGCTTGTACT +
Preference number: 5 (lower is better)
Translates to: AKRVPPSALGTRARPRCPAWARS*PISACT
Trigger: AGTACAAGCTGAGATTGGCAAGCTCCGGGCCCAGGC...TGGACACCTTGGTCTGGCTCTTGTGCCAAGGGCTGAAGGAGGTACCCTCTTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR CAA 90 bp AAGAGGGTACCTCCTTCAGCCCTTGGCACAAGAGCCAGACCAAGGTGTCCAGGGTCTCCCGATCAGCCCTaGAGAGAGCGGAGGCTACAG +
Preference number: 5 (lower is better)
Translates to: KRVPPSALGTRARPRCPGSPDQP*RERRLQ
Trigger: CTGTAGCCTCCGCTCTCTCAAGGGCTGATCGGGAGA...CCCTGGACACCTTGGTCTGGCTCTTGTGCCAAGGGCTGAAGGAGGTACCCTCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR CAA 90 bp GGGTACCTCCTTCAGCCCTTGGCACAAGAGCCAGACCAAGGTGTCCAGGGAACTTCTCCCGATCAGCCCTaGAGAGAGCGGAGGCTACAG +
Preference number: 5 (lower is better)
Translates to: GYLLQPLAQEPDQGVQGTSPDQP*RERRLQ
Trigger: CTGTAGCCTCCGCTCTCTCAAGGGCTGATCGGGAGA...AGTTCCCTGGACACCTTGGTCTGGCTCTTGTGCCAAGGGCTGAAGGAGGTACCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR CAA 90 bp TACCTCCTTCAGCCCTTGGCACAAGAGCCAGACCAAGGTGTCCAGGGAACTCCAACCTCGGCCTTAGCCTaGCGTTCCGCTGCCATGAGC +
Preference number: 5 (lower is better)
Translates to: YLLQPLAQEPDQGVQGTPTSALA*RSAAMS
Trigger: GCTCATGGCAGCGGAACGCAAGGCTAAGGCCGAGGT...TGGAGTTCCCTGGACACCTTGGTCTGGCTCTTGTGCCAAGGGCTGAAGGAGGTA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR CAA 90 bp AGGGAACTCCACAGGACAGAAGCCCTGCCGAGGTTAGGGGGATGGTGGGTGAAGAGGACTGCATCCTTCTaGCGGGTGTTACAGCAGGGG +
Preference number: 5 (lower is better)
Translates to: RELHRTEALPRLGGWWVKRTASF*RVLQQG
Trigger: CCCCTGCTGTAACACCCGCAAGAAGGATGCAGTCCT...CTTCACCCACCATCCCCCTAACCTCGGCAGGGCTTCTGTCCTGTGGAGTTCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR CAA 90 bp CCTTCAGGCCCAGTCCGGGATCCCTGCCGGCCGTTAAGTCTGAGCCCTCCCAGGAAAACGTGGAAGCACTaGGTAAGGACTGCATCCTTC +
Preference number: 5 (lower is better)
Translates to: PSGPVRDPCRPLSLSPPRKTWKH*VRTASF
Trigger: GAAGGATGCAGTCCTTACCAAGTGCTTCCACGTTTT...CCTGGGAGGGCTCAGACTTAACGGCCGGCAGGGATCCCGGACTGGGCCTGAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324685.11
CDS-3UTR CAA 90 bp TACCTCCTTCAGCCCTTGGCACAAGAGCCAGACCAAGGTGTCCAGGGAACTCCAGGACCCAGTAGAGCCTaGGGATGCATGAGGTGGGGG +
Preference number: 5 (lower is better)
Translates to: YLLQPLAQEPDQGVQGTPGPSRA*GCMRWG
Trigger: CCCCCACCTCATGCATCCCAAGGCTCTACTGGGTCC...TGGAGTTCCCTGGACACCTTGGTCTGGCTCTTGTGCCAAGGGCTGAAGGAGGTA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
ENST00000602784.1
CDS-3UTR CAA 90 bp CCTTCTTGCGGGTGTTACAGCAGGGGCAGGTCAACCGCGCCTGGGCCAGGCAAAGGCAAAGGCATCAGCTaGGGAACAACTCTGACAGTG +
Preference number: 5 (lower is better)
Translates to: PSCGCYSRGRSTAPGPGKGKGIS*GTTLTV
Trigger: CACTGTCAGAGTTGTTCCCAAGCTGATGCCTTTGCC...TTTGCCTGGCCCAGGCGCGGTTGACCTGCCCCTGCTGTAACACCCGCAAGAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567365.2
CDS GCA 90 bp CCGCACGCACTCGAAGCAGAAAACGTGGAAGCACTTGGTAAGGACTaGATCCTTCTTGCGGGTGTTACAGCAGGGGCAGGTCAACCGCGC +
Preference number: 5 (lower is better)
Translates to: PHALEAENVEALGKD*ILLAGVTAGAGQPR
Trigger: GCGCGGTTGACCTGCCCCTGCTGTAACACCCGCAAGAAGGATGCAGTCCTTACCAAGTGCTTCCACGTTTTCTGCTTCGAGTGCGTGCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000493683.5
ENST00000563683.5
CDS-3UTR CAA 90 bp CTCCGGGCACTGCCCTCACAGCCGATGGAGCATGGCTGGGCAGGCAGACAGGACGCCAGTTTCTTGTTCTaGAACTGTAGTACCTTCAGG +
Preference number: 5 (lower is better)
Translates to: LRALPSQPMEHGWAGRQDASFLF*NCSTFR
Trigger: CCTGAAGGTACTACAGTTCAAGAACAAGAAACTGGC...GTCCTGTCTGCCTGCCCAGCCATGCTCCATCGGCTGTGAGGGCAGTGCCCGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR CAA 90 bp AGCTCCAACCCTCTGGCCTCTCCGGGCACTGCCCTCACAGCCGATGGAGCATGGCGCTCTGCCAGTTTCTaGTTCTTGAACTGTAGTACC +
Preference number: 5 (lower is better)
Translates to: SSNPLASPGTALTADGAWRSASF*FLNCST
Trigger: GGTACTACAGTTCAAGAACAAGAAACTGGCAGAGCG...CCATGCTCCATCGGCTGTGAGGGCAGTGCCCGGAGAGGCCAGAGGGTTGGAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR CAA 90 bp GCCAAGAGGGTACCTCCTTCAGCCCTTGGCACAAGAGCCAGACCAAGGTGTCCACGAGACACAGCTGCCTaGGAGAACTCCATTCGGCCT +
Preference number: 5 (lower is better)
Translates to: AKRVPPSALGTRARPRCPRDTAA*ENSIRP
Trigger: AGGCCGAATGGAGTTCTCCAAGGCAGCTGTGTCTCG...TGGACACCTTGGTCTGGCTCTTGTGCCAAGGGCTGAAGGAGGTACCCTCTTGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR CAA 90 bp GACAGACAGGTTAGGGCCAGTTTCCGGGAAGCTCAGTCAAGTGCTCTGGGCTCCAGCATCTCATACTCCTaGCGTACCTGGGCCAGCGTG +
Preference number: 5 (lower is better)
Translates to: DRQVRASFREAQSSALGSSISYS*RTWASV
Trigger: CACGCTGGCCCAGGTACGCAAGGAGTATGAGATGCT...GGAGCCCAGAGCACTTGACTGAGCTTCCCGGAAACTGGCCCTAACCTGTCTGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR CAA 90 bp AGCACCTGCAAGATGAGGAAGGTGACTGCAGCAACCTTAGAGCTTCCCAAAGGAGGCCCCGCCTGCTCGTaGGCCGCCAGATTCTGCTCA +
Preference number: 5 (lower is better)
Translates to: STCKMRKVTAATLELPKGGPACS*AARFCS
Trigger: TGAGCAGAATCTGGCGGCCAACGAGCAGGCGGGGCC...TCCTTTGGGAAGCTCTAAGGTTGCTGCAGTCACCTTCCTCATCTTGCAGGTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR CAA 90 bp TACCTCCTTCAGCCCTTGGCACAAGAGCCAGACCAAGGTGTCCAGGGAACTCCATCTCGAAGCTTCCGCTaGTATCGCTGGGCGTCCCCT +
Preference number: 5 (lower is better)
Translates to: YLLQPLAQEPDQGVQGTPSRSFR*YRWASP
Trigger: AGGGGACGCCCAGCGATACAAGCGGAAGCTTCGAGA...TGGAGTTCCCTGGACACCTTGGTCTGGCTCTTGTGCCAAGGGCTGAAGGAGGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR CAA 90 bp ACAAGCATCTCTAGAACAGAGGCTGTGGGTCCAAACGGGTCCCTGCAGCTCCAAACCTCGGCCTTAGCCTaGCGTTCCGCTGCCATGAGC +
Preference number: 5 (lower is better)
Translates to: TSISRTEAVGPNGSLQLQTSALA*RSAAMS
Trigger: GCTCATGGCAGCGGAACGCAAGGCTAAGGCCGAGGT...TTGGAGCTGCAGGGACCCGTTTGGACCCACAGCCTCTGTTCTAGAGATGCTTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR CAA 90 bp GACAGACAGGTTAGGGCCAGTTTCCGGGAAGCTCAGTCAAGTGCTCTGGGCTCCTCTACAGCCTTCCGCTaGTTGAGCTCCAGGGCTTGG +
Preference number: 5 (lower is better)
Translates to: DRQVRASFREAQSSALGSSTAFR*LSSRAW
Trigger: CCAAGCCCTGGAGCTCAACAAGCGGAAGGCTGTAGA...GGAGCCCAGAGCACTTGACTGAGCTTCCCGGAAACTGGCCCTAACCTGTCTGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR CAA 90 bp GAGGGTACCTCCTTCAGCCCTTGGCACAAGAGCCAGACCAAGGTGTCCAGGGAACAGGTCAACCGCGCCTaGTACTCCTTGATCTCCTCC +
Preference number: 5 (lower is better)
Translates to: EGTSFSPWHKSQTKVSREQVNRA*YSLISS
Trigger: GGAGGAGATCAAGGAGTACAAGGCGCGGTTGACCTG...TTCCCTGGACACCTTGGTCTGGCTCTTGTGCCAAGGGCTGAAGGAGGTACCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR CAA 90 bp AAGAGGGTACCTCCTTCAGCCCTTGGCACAAGAGCCAGACCAAGGTGTCCAGGGAGGACTGCATCCTTCTaGCGGGTGTTACAGCAGGGG +
Preference number: 5 (lower is better)
Translates to: KRVPPSALGTRARPRCPGRTASF*RVLQQG
Trigger: CCCCTGCTGTAACACCCGCAAGAAGGATGCAGTCCT...CCCTGGACACCTTGGTCTGGCTCTTGTGCCAAGGGCTGAAGGAGGTACCCTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR CAA 90 bp TCCACTGTAGTTAAGGCCACCAGGATGAAAGCAGGGTTAGGTCCAGGGACCCAGGCACCAAAGGCCGCGTaGCACTTGGGGCACTTCCTC +
Preference number: 5 (lower is better)
Translates to: STVVKATRMKAGLGPGTQAPKAA*HLGHFL
Trigger: GAGGAAGTGCCCCAAGTGCAACGCGGCCTTTGGTGC...CTGGGTCCCTGGACCTAACCCTGCTTTCATCCTGGTGGCCTTAACTACAGTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR CAA 90 bp TCCCTTCCCCTCCTGGGAAGTTCCACCTCCACTGTAGTTAAGGCCACCAGGATGTGGAATGATTGGAAGTaGGCCCAGCGGCTGGGGCTG +
Preference number: 5 (lower is better)
Translates to: SLPLLGSSTSTVVKATRMWNDWK*AQRLGL
Trigger: CAGCCCCAGCCGCTGGGCCAACTTCCAATCATTCCA...CATCCTGGTGGCCTTAACTACAGTGGAGGTGGAACTTCCCAGGAGGGGAAGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
ENST00000602784.1
CDS GCA 90 bp AGCTCATCAACCTCGGCCTTAGCCTTGCGTTCCGCTGCCATGAGCTaGACCTTATCCCGCTGCTCCTTGGGCGCTGACTTGTACATATCC +
Preference number: 5 (lower is better)
Translates to: SSSTSALALRSAAMS*TLSRCSLGADLYIS
Trigger: GGATATGTACAAGTCAGCGCCCAAGGAGCAGCGGGATAAGGTGCAGCTCATGGCAGCGGAACGCAAGGCTAAGGCCGAGGTTGATGAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000493683.5
ENST00000563683.5
CDS-3UTR CAA 90 bp AAGAGGGTACCTCCTTCAGCCCTTGGCACAAGAGCCAGACCAAGGTGTCCAGGGGCAAGTCCTCCACTGTaGTCTCCATCTCCAGCACCT +
Preference number: 5 (lower is better)
Translates to: KRVPPSALGTRARPRCPGASPPL*SPSPAP
Trigger: AGGTGCTGGAGATGGAGACAACAGTGGAGGACTTGC...CCCTGGACACCTTGGTCTGGCTCTTGTGCCAAGGGCTGAAGGAGGTACCCTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR CAA 90 bp ACAAGCATCTCTAGAACAGAGGCTGTGGGTCCAAACGGGTCCCTGCAGCTCCAAGCCTGGGCCCGGAGCTaGCCAATCTCAGCTTGTACT +
Preference number: 5 (lower is better)
Translates to: TSISRTEAVGPNGSLQLQAWARS*PISACT
Trigger: AGTACAAGCTGAGATTGGCAAGCTCCGGGCCCAGGC...TTGGAGCTGCAGGGACCCGTTTGGACCCACAGCCTCTGTTCTAGAGATGCTTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR CAA 90 bp AAGAGGGTACCTCCTTCAGCCCTTGGCACAAGAGCCAGACCAAGGTGTCCAGGGTTGGTTTCTTCCACCTaGGCCTTCTCCCGATCAGCC +
Preference number: 5 (lower is better)
Translates to: KRVPPSALGTRARPRCPGLVSST*AFSRSA
Trigger: GGCTGATCGGGAGAAGGCCAAGGTGGAAGAAACCAA...CCCTGGACACCTTGGTCTGGCTCTTGTGCCAAGGGCTGAAGGAGGTACCCTCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR CAA 90 bp GAGGGTACCTCCTTCAGCCCTTGGCACAAGAGCCAGACCAAGGTGTCCAGGGAATCATCCGCGATCTTCTaGCTCTCCCTTCGATCCCTC +
Preference number: 5 (lower is better)
Translates to: EGTSFSPWHKSQTKVSRESSAIF*LSLRSL
Trigger: GAGGGATCGAAGGGAGAGCAAGAAGATCGCGGATGA...TTCCCTGGACACCTTGGTCTGGCTCTTGTGCCAAGGGCTGAAGGAGGTACCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR CAA 90 bp GCATCCACGGAGACAGACAGGTTAGGGCCAGTTTCCGGGAAGCTCAGTCAAGTGTTGGTGGCACCCAGCTaGCGCTGCAGGTGTTCTATC +
Preference number: 5 (lower is better)
Translates to: ASTETDRLGPVSGKLSQVLVAPS*RCRCSI
Trigger: GATAGAACACCTGCAGCGCAAGCTGGGTGCCACCAA...CACTTGACTGAGCTTCCCGGAAACTGGCCCTAACCTGTCTGTCTCCGTGGATGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR CAA 90 bp AGCACCTGCAAGATGAGGAAGGTGACTGCAGCAACCTTAGAGCTTCCCAAAGGAGTTGAGCTCCAGGGCTaGGCTGCGCAGCGTCAGCTC +
Preference number: 5 (lower is better)
Translates to: STCKMRKVTAATLELPKGVELQG*AAQRQL
Trigger: GAGCTGACGCTGCGCAGCCAAGCCCTGGAGCTCAAC...TCCTTTGGGAAGCTCTAAGGTTGCTGCAGTCACCTTCCTCATCTTGCAGGTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR CAA 90 bp TTAAGTCTGAGCCCTCCCAGGCTCACACCAAGCCAGCAAAGTGCTGCTCAGCTGTCTACAGCCTTCCGCTaGTTGAGCTCCAGGGCTTGG +
Preference number: 5 (lower is better)
Translates to: LSLSPPRLTPSQQSAAQLSTAFR*LSSRAW
Trigger: CCAAGCCCTGGAGCTCAACAAGCGGAAGGCTGTAGA...CAGCTGAGCAGCACTTTGCTGGCTTGGTGTGAGCCTGGGAGGGCTCAGACTTAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324685.11
CDS-3UTR CAA 90 bp GAGGGTACCTCCTTCAGCCCTTGGCACAAGAGCCAGACCAAGGTGTCCAGGGAATACCTCCTTCAGCCCTaGGCACAAGAGCCAGACCAA +
Preference number: 5 (lower is better)
Translates to: EGTSFSPWHKSQTKVSREYLLQP*AQEPDQ
Trigger: TTGGTCTGGCTCTTGTGCCAAGGGCTGAAGGAGGTA...TTCCCTGGACACCTTGGTCTGGCTCTTGTGCCAAGGGCTGAAGGAGGTACCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
ENST00000602784.1
CDS-3UTR CAA 90 bp TCCACTGTAGTTAAGGCCACCAGGATGAAAGCAGGGTTAGGTCCAGGGACCCAGTGGAATGATTGGAAGTaGGCCCAGCGGCTGGGGCTG +
Preference number: 5 (lower is better)
Translates to: STVVKATRMKAGLGPGTQWNDWK*AQRLGL
Trigger: CAGCCCCAGCCGCTGGGCCAACTTCCAATCATTCCA...CTGGGTCCCTGGACCTAACCCTGCTTTCATCCTGGTGGCCTTAACTACAGTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
ENST00000602784.1
CDS-3UTR CAA 90 bp ACAGCCTATACAAGCATCTCTAGAACAGAGGCTGTGGGTCCAAACGGGTCCCTGATCGGGGGACTACATTaGGGGTGCGCGGCCTGGCTA +
Preference number: 5 (lower is better)
Translates to: TAYTSISRTEAVGPNGSLIGGLH*GCAAWL
Trigger: TAGCCAGGCCGCGCACCCCAAATGTAGTCCCCCGAT...CAGGGACCCGTTTGGACCCACAGCCTCTGTTCTAGAGATGCTTGTATAGGCTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324685.11
CDS-3UTR CAA 90 bp TGGTTCAGCACCTGCAAGATGAGGAAGGTGACTGCAGCAACCTTAGAGCTTCCCAGTTCAGGCCGGCCTTaGGCCAGCGCAACCGGGAAA +
Preference number: 5 (lower is better)
Translates to: WFSTCKMRKVTAATLELPSSGRP*ASATGK
Trigger: TTTCCCGGTTGCGCTGGCCAAAGGCCGGCCTGAACT...GGGAAGCTCTAAGGTTGCTGCAGTCACCTTCCTCATCTTGCAGGTGCTGAACCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324685.11
CDS-3UTR CAA 90 bp TCCACTGTAGTTAAGGCCACCAGGATGAAAGCAGGGTTAGGTCCAGGGACCCAGCGAGACACAGCTGCCTaGGAGAACTCCATTCGGCCT +
Preference number: 5 (lower is better)
Translates to: STVVKATRMKAGLGPGTQRDTAA*ENSIRP
Trigger: AGGCCGAATGGAGTTCTCCAAGGCAGCTGTGTCTCG...CTGGGTCCCTGGACCTAACCCTGCTTTCATCCTGGTGGCCTTAACTACAGTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR CAA 90 bp CCCCCATCTGCCAAGAGGGTACCTCCTTCAGCCCTTGGCACAAGAGCCAGACCATCTGCCAGGTGCTTATaGAGCTTTTGCTCTCGCTTC +
Preference number: 5 (lower is better)
Translates to: PPSAKRVPPSALGTRARPSARCL*SFCSRF
Trigger: GAAGCGAGAGCAAAAGCTCAATAAGCACCTGGCAGA...TGGTCTGGCTCTTGTGCCAAGGGCTGAAGGAGGTACCCTCTTGGCAGATGGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR CAA 90 bp ACAGCCTATACAAGCATCTCTAGAACAGAGGCTGTGGGTCCAAACGGGTCCCTGGCCTGGGCCCGGAGCTaGCCAATCTCAGCTTGTACT +
Preference number: 5 (lower is better)
Translates to: TAYTSISRTEAVGPNGSLAWARS*PISACT
Trigger: AGTACAAGCTGAGATTGGCAAGCTCCGGGCCCAGGC...CAGGGACCCGTTTGGACCCACAGCCTCTGTTCTAGAGATGCTTGTATAGGCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR CAA 90 bp GACAGACAGGTTAGGGCCAGTTTCCGGGAAGCTCAGTCAAGTGCTCTGGGCTCCTCTGCTCGGAGACCCTaGAGGAGTTCTGATTCCTTC +
Preference number: 5 (lower is better)
Translates to: DRQVRASFREAQSSALGSSARRP*RSSDSF
Trigger: GAAGGAATCAGAACTCCTCAAGGGTCTCCGAGCAGA...GGAGCCCAGAGCACTTGACTGAGCTTCCCGGAAACTGGCCCTAACCTGTCTGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR CAA 90 bp GAGGGTACCTCCTTCAGCCCTTGGCACAAGAGCCAGACCAAGGTGTCCAGGGAATTATCCCGCTGCTCCTaGGGCGCTGACTTGTACATA +
Preference number: 5 (lower is better)
Translates to: EGTSFSPWHKSQTKVSRELSRCS*GADLYI
Trigger: TATGTACAAGTCAGCGCCCAAGGAGCAGCGGGATAA...TTCCCTGGACACCTTGGTCTGGCTCTTGTGCCAAGGGCTGAAGGAGGTACCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR CAA 90 bp CCTCCTTCAGCCCTTGGCACAAGAGCCAGACCAAGGTGTCCAGGGAACTCCACATTATCCCGCTGCTCCTaGGGCGCTGACTTGTACATA +
Preference number: 5 (lower is better)
Translates to: PPSALGTRARPRCPGNSTLSRCS*GADLYI
Trigger: TATGTACAAGTCAGCGCCCAAGGAGCAGCGGGATAA...TGTGGAGTTCCCTGGACACCTTGGTCTGGCTCTTGTGCCAAGGGCTGAAGGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR CAA 90 bp CACCTGCAAGATGAGGAAGGTGACTGCAGCAACCTTAGAGCTTCCCAAAGGAAGACCTCGGCCTTAGCCTaGCGTTCCGCTGCCATGAGC +
Preference number: 5 (lower is better)
Translates to: HLQDEEGDCSNLRASQRKTSALA*RSAAMS
Trigger: GCTCATGGCAGCGGAACGCAAGGCTAAGGCCGAGGT...CTTCCTTTGGGAAGCTCTAAGGTTGCTGCAGTCACCTTCCTCATCTTGCAGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR CAA 90 bp CAAGATGAGGAAGGTGACTGCAGCAACCTTAGAGCTTCCCAAAGGAAGCAAGTGGTTGAGCTCCAGGGCTaGGCTGCGCAGCGTCAGCTC +
Preference number: 5 (lower is better)
Translates to: QDEEGDCSNLRASQRKQVVELQG*AAQRQL
Trigger: GAGCTGACGCTGCGCAGCCAAGCCCTGGAGCTCAAC...CACTTGCTTCCTTTGGGAAGCTCTAAGGTTGCTGCAGTCACCTTCCTCATCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR CAA 90 bp CAAGGACATGGCTCACTGGTCCTCATTTGTGAGCCAGTAGGCAGGGAGCGAGCCAAGATGGAACGAAGCTaGGCTGATCCCATGCCCACT +
Preference number: 5 (lower is better)
Translates to: QGHGSLVLICEPVGRERAKMERS*ADPMPT
Trigger: AGTGGGCATGGGATCAGCCAAGCTTCGTTCCATCTT...GGCTCGCTCCCTGCCTACTGGCTCACAAATGAGGACCAGTGAGCCATGTCCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR CAA 90 bp CACCTGCAAGATGAGGAAGGTGACTGCAGCAACCTTAGAGCTTCCCAAAGGAAGGGACCCAGTAGAGCCTaGGGATGCATGAGGTGGGGG +
Preference number: 5 (lower is better)
Translates to: HLQDEEGDCSNLRASQRKGPSRA*GCMRWG
Trigger: CCCCCACCTCATGCATCCCAAGGCTCTACTGGGTCC...CTTCCTTTGGGAAGCTCTAAGGTTGCTGCAGTCACCTTCCTCATCTTGCAGGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
ENST00000602784.1
CDS CCA 90 bp AAAGGTGTCAGAACCAGTTCCTGGGTTAGGACTCCAACCCCTCAGTaGGGTAAGAGGCTATGCCATCACTCCCACTGTGCAGGAGGGGAA +
Preference number: 5 (lower is better)
Translates to: KGVRTSSWVRTPTPQ*GKRLCHHSHCAGGE
Trigger: TTCCCCTCCTGCACAGTGGGAGTGATGGCATAGCCTCTTACCCCACTGAGGGGTTGGAGTCCTAACCCAGGAACTGGTTCTGACACCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564260.1
CDS-3UTR CAA 90 bp GTCCAGGGAACTCCACAGGACAGAAGCCCTGCCGAGGTTAGGGGGATGGTGGGTGCCAGTTTCTTGTTCTaGAACTGTAGTACCTTCAGG +
Preference number: 5 (lower is better)
Translates to: VQGTPQDRSPAEVRGMVGASFLF*NCSTFR
Trigger: CCTGAAGGTACTACAGTTCAAGAACAAGAAACTGGC...ACCCACCATCCCCCTAACCTCGGCAGGGCTTCTGTCCTGTGGAGTTCCCTGGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR CAA 90 bp CACCTGCAAGATGAGGAAGGTGACTGCAGCAACCTTAGAGCTTCCCAAAGGAAGTTCACAAGCCTGCCGTaGTTCCAGCCGCTCTGCCAG +
Preference number: 5 (lower is better)
Translates to: HLQDEEGDCSNLRASQRKFTSLP*FQPLCQ
Trigger: CTGGCAGAGCGGCTGGAACAACGGCAGGCTTGTGAA...CTTCCTTTGGGAAGCTCTAAGGTTGCTGCAGTCACCTTCCTCATCTTGCAGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR CAA 90 bp GACAGACAGGTTAGGGCCAGTTTCCGGGAAGCTCAGTCAAGTGCTCTGGGCTCCGTGCTTATTGAGCTTTaGCTCTCGCTTCCGCAGCTT +
Preference number: 5 (lower is better)
Translates to: DRQVRASFREAQSSALGSVLIEL*LSLPQL
Trigger: AAGCTGCGGAAGCGAGAGCAAAAGCTCAATAAGCAC...GGAGCCCAGAGCACTTGACTGAGCTTCCCGGAAACTGGCCCTAACCTGTCTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR CAA 90 bp CAATTAACAGCCTATACAAGCATCTCTAGAACAGAGGCTGTGGGTCCAAACGGGGCAGGTGGGAGTTCTTaGTGGCCAGCAGCAGGCCCC +
Preference number: 5 (lower is better)
Translates to: QLTAYTSISRTEAVGPNGAGGSS*WPAAGP
Trigger: GGGGCCTGCTGCTGGCCACAAAGAACTCCCACCTGC...CCCGTTTGGACCCACAGCCTCTGTTCTAGAGATGCTTGTATAGGCTGTTAATTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324685.11
ENST00000563683.5
CDS-3UTR CAA 90 bp TTGGGAAGGGGCCTGATTAGAATAGAAACTGATGATGTTGGTTCAGCACCTGCATGGCGCATCTCACGGTaGATGGGCCCCGCCTGCTCG +
Preference number: 5 (lower is better)
Translates to: LGRGLIRIETDDVGSAPAWRISR*MGPACS
Trigger: CGAGCAGGCGGGGCCCATCAACCGTGAGATGCGCCA...TGCAGGTGCTGAACCAACATCATCAGTTTCTATTCTAATCAGGCCCCTTCCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR CAA 90 bp AACAAGGAACAAGGACATGGCTCACTGGTCCTCATTTGTGAGCCAGTAGGCAGGTCTCGAAGCTTCCGCTaGTATCGCTGGGCGTCCCCT +
Preference number: 5 (lower is better)
Translates to: NKEQGHGSLVLICEPVGRSRSFR*YRWASP
Trigger: AGGGGACGCCCAGCGATACAAGCGGAAGCTTCGAGA...CCTGCCTACTGGCTCACAAATGAGGACCAGTGAGCCATGTCCTTGTTCCTTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR CAA 90 bp GAACGAAGCTTGGCTGATCCCATGCCCACTAGCATGCACCAGGGTCCCCAAACCCTTGCCAATCTCAGCTaGTACTTCTCGAAGCTTCCG +
Preference number: 5 (lower is better)
Translates to: ERSLADPMPTSMHQGPQTLANLS*YFSKLP
Trigger: CGGAAGCTTCGAGAAGTACAAGCTGAGATTGGCAAG...GGTTTGGGGACCCTGGTGCATGCTAGTGGGCATGGGATCAGCCAAGCTTCGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR CAA 90 bp TGGTTCAGCACCTGCAAGATGAGGAAGGTGACTGCAGCAACCTTAGAGCTTCCCGCCATCTCCTTTCTGTaGTCGGGGGTACTGACAGGG +
Preference number: 5 (lower is better)
Translates to: WFSTCKMRKVTAATLELPAISFL*SGVLTG
Trigger: CCCTGTCAGTACCCCCGACAACAGAAAGGAGATGGC...GGGAAGCTCTAAGGTTGCTGCAGTCACCTTCCTCATCTTGCAGGTGCTGAACCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR CAA 90 bp TACCTCCTTCAGCCCTTGGCACAAGAGCCAGACCAAGGTGTCCAGGGAACTCCATCTGCTCGGAGACCCTaGAGGAGTTCTGATTCCTTC +
Preference number: 5 (lower is better)
Translates to: YLLQPLAQEPDQGVQGTPSARRP*RSSDSF
Trigger: GAAGGAATCAGAACTCCTCAAGGGTCTCCGAGCAGA...TGGAGTTCCCTGGACACCTTGGTCTGGCTCTTGTGCCAAGGGCTGAAGGAGGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR CAA 90 bp ACAAGCATCTCTAGAACAGAGGCTGTGGGTCCAAACGGGTCCCTGCAGCTCCAATCATCCGCGATCTTCTaGCTCTCCCTTCGATCCCTC +
Preference number: 5 (lower is better)
Translates to: TSISRTEAVGPNGSLQLQSSAIF*LSLRSL
Trigger: GAGGGATCGAAGGGAGAGCAAGAAGATCGCGGATGA...TTGGAGCTGCAGGGACCCGTTTGGACCCACAGCCTCTGTTCTAGAGATGCTTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR CAA 90 bp GGGTGGCCTTTAGCGCAGATATCTAGAGAGACGATGCGGAATTACTTGGCATCTGGACCCAGTAGAGCCTaGGGATGCATGAGGTGGGGG +
Preference number: 5 (lower is better)
Translates to: GWPLAQISRETMRNYLASGPSRA*GCMRWG
Trigger: CCCCCACCTCATGCATCCCAAGGCTCTACTGGGTCC...AGATGCCAAGTAATTCCGCATCGTCTCTCTAGATATCTGCGCTAAAGGCCACCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324685.11
CDS-3UTR CAA 90 bp CAAGATGAGGAAGGTGACTGCAGCAACCTTAGAGCTTCCCAAAGGAAGCAAGTGGGACCCAGTAGAGCCTaGGGATGCATGAGGTGGGGG +
Preference number: 5 (lower is better)
Translates to: QDEEGDCSNLRASQRKQVGPSRA*GCMRWG
Trigger: CCCCCACCTCATGCATCCCAAGGCTCTACTGGGTCC...CACTTGCTTCCTTTGGGAAGCTCTAAGGTTGCTGCAGTCACCTTCCTCATCTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
ENST00000602784.1
CDS GCA 90 bp GAGTTAAGCTGCTCTAAGGCCTCTGCCAGGTGCTTATTGAGCTTTTaGTCTCGCTTCCGCAGCTTCTCGATGTCCCACTGCAAGTCCTCC +
Preference number: 5 (lower is better)
Translates to: ELSCSKASARCLLSF*SRFRSFSMSHCKSS
Trigger: GGAGGACTTGCAGTGGGACATCGAGAAGCTGCGGAAGCGAGAGCAAAAGCTCAATAAGCACCTGGCAGAGGCCTTAGAGCAGCTTAACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000493683.5
ENST00000563683.5
ENST00000565995.5
ENST00000566703.1
CDS CCA 90 bp CTCAGGACTCAGTATCTTAGGAAGAATCTATTCCCCAGGGACCCCTaGCTGGCACACAGGGCCTCGGAAGGCACAAACACGTCAACACTA +
Preference number: 5 (lower is better)
Translates to: LRTQYLRKNLFPRDP*LAHRASEGTNTSTL
Trigger: TAGTGTTGACGTGTTTGTGCCTTCCGAGGCCCTGTGTGCCAGCCAGGGGTCCCTGGGGAATAGATTCTTCCTAAGATACTGAGTCCTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566703.1
CDS-3UTR CAA 90 bp AGTTCAGGCCGGCCTTTGGCCAGCGCAACCGGGAAACTAGCTCTCTCTCCGAGAGCCAGTTTCTTGTTCTaGAACTGTAGTACCTTCAGG +
Preference number: 5 (lower is better)
Translates to: SSGRPLASATGKLALSPRASFLF*NCSTFR
Trigger: CCTGAAGGTACTACAGTTCAAGAACAAGAAACTGGC...TCTCGGAGAGAGAGCTAGTTTCCCGGTTGCGCTGGCCAAAGGCCGGCCTGAACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324685.11
CDS-3UTR CAA 90 bp AGCACCTGCAAGATGAGGAAGGTGACTGCAGCAACCTTAGAGCTTCCCAAAGGAAGCATCTCATACTCCTaGCGTACCTGGGCCAGCGTG +
Preference number: 5 (lower is better)
Translates to: STCKMRKVTAATLELPKGSISYS*RTWASV
Trigger: CACGCTGGCCCAGGTACGCAAGGAGTATGAGATGCT...TCCTTTGGGAAGCTCTAAGGTTGCTGCAGTCACCTTCCTCATCTTGCAGGTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR CAA 90 bp TGGTTCAGCACCTGCAAGATGAGGAAGGTGACTGCAGCAACCTTAGAGCTTCCCTTGGTTTCTTCCACCTaGGCCTTCTCCCGATCAGCC +
Preference number: 5 (lower is better)
Translates to: WFSTCKMRKVTAATLELPLVSST*AFSRSA
Trigger: GGCTGATCGGGAGAAGGCCAAGGTGGAAGAAACCAA...GGGAAGCTCTAAGGTTGCTGCAGTCACCTTCCTCATCTTGCAGGTGCTGAACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR CAA 90 bp ACAAGCATCTCTAGAACAGAGGCTGTGGGTCCAAACGGGTCCCTGCAGCTCCAATCCTTGGGCGCTGACTaGTACATATCCAGCAGCAGT +
Preference number: 5 (lower is better)
Translates to: TSISRTEAVGPNGSLQLQSLGAD*YISSSS
Trigger: ACTGCTGCTGGATATGTACAAGTCAGCGCCCAAGGA...TTGGAGCTGCAGGGACCCGTTTGGACCCACAGCCTCTGTTCTAGAGATGCTTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR CAA 90 bp ACAAGCATCTCTAGAACAGAGGCTGTGGGTCCAAACGGGTCCCTGCAGCTCCAATTATCCCGCTGCTCCTaGGGCGCTGACTTGTACATA +
Preference number: 5 (lower is better)
Translates to: TSISRTEAVGPNGSLQLQLSRCS*GADLYI
Trigger: TATGTACAAGTCAGCGCCCAAGGAGCAGCGGGATAA...TTGGAGCTGCAGGGACCCGTTTGGACCCACAGCCTCTGTTCTAGAGATGCTTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR CAA 90 bp ACAGCCTATACAAGCATCTCTAGAACAGAGGCTGTGGGTCCAAACGGGTCCCTGTCATCCGCGATCTTCTaGCTCTCCCTTCGATCCCTC +
Preference number: 5 (lower is better)
Translates to: TAYTSISRTEAVGPNGSLSSAIF*LSLRSL
Trigger: GAGGGATCGAAGGGAGAGCAAGAAGATCGCGGATGA...CAGGGACCCGTTTGGACCCACAGCCTCTGTTCTAGAGATGCTTGTATAGGCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR CAA 90 bp AGCACCTGCAAGATGAGGAAGGTGACTGCAGCAACCTTAGAGCTTCCCAAAGGACAGGTCAACCGCGCCTaGTACTCCTTGATCTCCTCC +
Preference number: 5 (lower is better)
Translates to: STCKMRKVTAATLELPKGQVNRA*YSLISS
Trigger: GGAGGAGATCAAGGAGTACAAGGCGCGGTTGACCTG...TCCTTTGGGAAGCTCTAAGGTTGCTGCAGTCACCTTCCTCATCTTGCAGGTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR CAA 90 bp CAAGATGAGGAAGGTGACTGCAGCAACCTTAGAGCTTCCCAAAGGAAGCAAGTGTGGAATGATTGGAAGTaGGCCCAGCGGCTGGGGCTG +
Preference number: 5 (lower is better)
Translates to: QDEEGDCSNLRASQRKQVWNDWK*AQRLGL
Trigger: CAGCCCCAGCCGCTGGGCCAACTTCCAATCATTCCA...CACTTGCTTCCTTTGGGAAGCTCTAAGGTTGCTGCAGTCACCTTCCTCATCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
ENST00000602784.1
CDS-3UTR CAA 90 bp GCATCCACGGAGACAGACAGGTTAGGGCCAGTTTCCGGGAAGCTCAGTCAAGTGACGATGCGGAATTACTaGGCATCTACTCAAGAGCCC +
Preference number: 5 (lower is better)
Translates to: ASTETDRLGPVSGKLSQVTMRNY*ASTQEP
Trigger: GGGCTCTTGAGTAGATGCCAAGTAATTCCGCATCGT...CACTTGACTGAGCTTCCCGGAAACTGGCCCTAACCTGTCTGTCTCCGTGGATGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324685.11
CDS-3UTR CAA 90 bp GGGTGGCCTTTAGCGCAGATATCTAGAGAGACGATGCGGAATTACTTGGCATCTCGAGACACAGCTGCCTaGGAGAACTCCATTCGGCCT +
Preference number: 5 (lower is better)
Translates to: GWPLAQISRETMRNYLASRDTAA*ENSIRP
Trigger: AGGCCGAATGGAGTTCTCCAAGGCAGCTGTGTCTCG...AGATGCCAAGTAATTCCGCATCGTCTCTCTAGATATCTGCGCTAAAGGCCACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324685.11
CDS-3UTR CAA 90 bp TTAGGATGCATCCACGGAGACAGACAGGTTAGGGCCAGTTTCCGGGAAGCTCAGTCTGCCAGGTGCTTATaGAGCTTTTGCTCTCGCTTC +
Preference number: 5 (lower is better)
Translates to: LGCIHGDRQVRASFREAQSARCL*SFCSRF
Trigger: GAAGCGAGAGCAAAAGCTCAATAAGCACCTGGCAGA...CTGAGCTTCCCGGAAACTGGCCCTAACCTGTCTGTCTCCGTGGATGCATCCTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR CAA 90 bp ATGTTGGTTCAGCACCTGCAAGATGAGGAAGGTGACTGCAGCAACCTTAGAGCTAGCATCTCATACTCCTaGCGTACCTGGGCCAGCGTG +
Preference number: 5 (lower is better)
Translates to: MLVQHLQDEEGDCSNLRASISYS*RTWASV
Trigger: CACGCTGGCCCAGGTACGCAAGGAGTATGAGATGCT...AGCTCTAAGGTTGCTGCAGTCACCTTCCTCATCTTGCAGGTGCTGAACCAACAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR CAA 90 bp GGCCGAGGGTTGAACGTTTATTCATCACAATTAACAGCCTATACAAGCATCTCTTGGCGCATCTCACGGTaGATGGGCCCCGCCTGCTCG +
Preference number: 5 (lower is better)
Translates to: GRGLNVYSSQLTAYTSISWRISR*MGPACS
Trigger: CGAGCAGGCGGGGCCCATCAACCGTGAGATGCGCCA...AGAGATGCTTGTATAGGCTGTTAATTGTGATGAATAAACGTTCAACCCTCGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324685.11
ENST00000357890.9
CDS-3UTR CAA 90 bp ACAAGCATCTCTAGAACAGAGGCTGTGGGTCCAAACGGGTCCCTGCAGCTCCAACTTGCCAATCTCAGCTaGTACTTCTCGAAGCTTCCG +
Preference number: 5 (lower is better)
Translates to: TSISRTEAVGPNGSLQLQLANLS*YFSKLP
Trigger: CGGAAGCTTCGAGAAGTACAAGCTGAGATTGGCAAG...TTGGAGCTGCAGGGACCCGTTTGGACCCACAGCCTCTGTTCTAGAGATGCTTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR CAA 90 bp CAAGATGAGGAAGGTGACTGCAGCAACCTTAGAGCTTCCCAAAGGAAGCAAGTGGCCATCTCCTTTCTGTaGTCGGGGGTACTGACAGGG +
Preference number: 5 (lower is better)
Translates to: QDEEGDCSNLRASQRKQVAISFL*SGVLTG
Trigger: CCCTGTCAGTACCCCCGACAACAGAAAGGAGATGGC...CACTTGCTTCCTTTGGGAAGCTCTAAGGTTGCTGCAGTCACCTTCCTCATCTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR CAA 90 bp CACCTGCAAGATGAGGAAGGTGACTGCAGCAACCTTAGAGCTTCCCAAAGGAAGTACCTCCTTCAGCCCTaGGCACAAGAGCCAGACCAA +
Preference number: 5 (lower is better)
Translates to: HLQDEEGDCSNLRASQRKYLLQP*AQEPDQ
Trigger: TTGGTCTGGCTCTTGTGCCAAGGGCTGAAGGAGGTA...CTTCCTTTGGGAAGCTCTAAGGTTGCTGCAGTCACCTTCCTCATCTTGCAGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
ENST00000602784.1
CDS GCA 90 bp TTATTGAGCTTTTGCTCTCGCTTCCGCAGCTTCTCGATGTCCCACTaGAAGTCCTCCACTGTTGTCTCCATCTCCAGCACCTTGGTCTCT +
Preference number: 5 (lower is better)
Translates to: LLSFCSRFRSFSMSH*KSSTVVSISSTLVS
Trigger: AGAGACCAAGGTGCTGGAGATGGAGACAACAGTGGAGGACTTGCAGTGGGACATCGAGAAGCTGCGGAAGCGAGAGCAAAAGCTCAATAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000493683.5
ENST00000563683.5
ENST00000565995.5
ENST00000566703.1
CDS-3UTR CAA 90 bp TTTTCCTTAGGGTTAGGATGCATCCACGGAGACAGACAGGTTAGGGCCAGTTTCTCTGCCATACGGCTGTaGGCCAGTTCCTGGTTTTCC +
Preference number: 5 (lower is better)
Translates to: FSLGLGCIHGDRQVRASFSAIRL*ASSWFS
Trigger: GGAAAACCAGGAACTGGCCAACAGCCGTATGGCAGA...GAAACTGGCCCTAACCTGTCTGTCTCCGTGGATGCATCCTAACCCTAAGGAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324685.11
CDS-3UTR CAA 90 bp TATTCATCACAATTAACAGCCTATACAAGCATCTCTAGAACAGAGGCTGTGGGTGGCCCCGCCTGCTCGTaGGCCGCCAGATTCTGCTCA +
Preference number: 5 (lower is better)
Translates to: YSSQLTAYTSISRTEAVGGPACS*AARFCS
Trigger: TGAGCAGAATCTGGCGGCCAACGAGCAGGCGGGGCC...ACCCACAGCCTCTGTTCTAGAGATGCTTGTATAGGCTGTTAATTGTGATGAATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR CAA 90 bp TTAAGTCTGAGCCCTCCCAGGCTCACACCAAGCCAGCAAAGTGCTGCTCAGCTGCTGGTGGTTGTGGTTTaGAAGACTACTAATCAGGTG +
Preference number: 5 (lower is better)
Translates to: LSLSPPRLTPSQQSAAQLLVVVV*KTTNQV
Trigger: CACCTGATTAGTAGTCTTCAAAACCACAACCACCAG...CAGCTGAGCAGCACTTTGCTGGCTTGGTGTGAGCCTGGGAGGGCTCAGACTTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324685.11
CDS-3UTR CAA 90 bp TCCCTTCCCCTCCTGGGAAGTTCCACCTCCACTGTAGTTAAGGCCACCAGGATGCTGGTGGTTGTGGTTTaGAAGACTACTAATCAGGTG +
Preference number: 5 (lower is better)
Translates to: SLPLLGSSTSTVVKATRMLVVVV*KTTNQV
Trigger: CACCTGATTAGTAGTCTTCAAAACCACAACCACCAG...CATCCTGGTGGCCTTAACTACAGTGGAGGTGGAACTTCCCAGGAGGGGAAGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR CAA 90 bp TGCAGGCCGAGGGTTGAACGTTTATTCATCACAATTAACAGCCTATACAAGCATGTTGAGCTCCAGGGCTaGGCTGCGCAGCGTCAGCTC +
Preference number: 5 (lower is better)
Translates to: CRPRVERLFITINSLYKHVELQG*AAQRQL
Trigger: GAGCTGACGCTGCGCAGCCAAGCCCTGGAGCTCAAC...ATGCTTGTATAGGCTGTTAATTGTGATGAATAAACGTTCAACCCTCGGCCTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324685.11
ENST00000357890.9
CDS-3UTR CAA 90 bp TATTCATCACAATTAACAGCCTATACAAGCATCTCTAGAACAGAGGCTGTGGGTGCAGGTGGGAGTTCTTaGTGGCCAGCAGCAGGCCCC +
Preference number: 5 (lower is better)
Translates to: YSSQLTAYTSISRTEAVGAGGSS*WPAAGP
Trigger: GGGGCCTGCTGCTGGCCACAAAGAACTCCCACCTGC...ACCCACAGCCTCTGTTCTAGAGATGCTTGTATAGGCTGTTAATTGTGATGAATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324685.11
ENST00000563683.5
CDS-3UTR CAA 90 bp TTTTCCTTAGGGTTAGGATGCATCCACGGAGACAGACAGGTTAGGGCCAGTTTCTCTGCTCGGAGACCCTaGAGGAGTTCTGATTCCTTC +
Preference number: 5 (lower is better)
Translates to: FSLGLGCIHGDRQVRASFSARRP*RSSDSF
Trigger: GAAGGAATCAGAACTCCTCAAGGGTCTCCGAGCAGA...GAAACTGGCCCTAACCTGTCTGTCTCCGTGGATGCATCCTAACCCTAAGGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR CAA 90 bp TTTTCCTTAGGGTTAGGATGCATCCACGGAGACAGACAGGTTAGGGCCAGTTTCTCCTTGGGCGCTGACTaGTACATATCCAGCAGCAGT +
Preference number: 5 (lower is better)
Translates to: FSLGLGCIHGDRQVRASFSLGAD*YISSSS
Trigger: ACTGCTGCTGGATATGTACAAGTCAGCGCCCAAGGA...GAAACTGGCCCTAACCTGTCTGTCTCCGTGGATGCATCCTAACCCTAAGGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR CAA 90 bp ACAGCCTATACAAGCATCTCTAGAACAGAGGCTGTGGGTCCAAACGGGTCCCTGAAAACGTGGAAGCACTaGGTAAGGACTGCATCCTTC +
Preference number: 5 (lower is better)
Translates to: TAYTSISRTEAVGPNGSLKTWKH*VRTASF
Trigger: GAAGGATGCAGTCCTTACCAAGTGCTTCCACGTTTT...CAGGGACCCGTTTGGACCCACAGCCTCTGTTCTAGAGATGCTTGTATAGGCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR CAA 90 bp TTTTCCTTAGGGTTAGGATGCATCCACGGAGACAGACAGGTTAGGGCCAGTTTCAAGATGGAACGAAGCTaGGCTGATCCCATGCCCACT +
Preference number: 5 (lower is better)
Translates to: FSLGLGCIHGDRQVRASFKMERS*ADPMPT
Trigger: AGTGGGCATGGGATCAGCCAAGCTTCGTTCCATCTT...GAAACTGGCCCTAACCTGTCTGTCTCCGTGGATGCATCCTAACCCTAAGGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR CAA 90 bp GGCCTGGCTACTCTGGCTGCAGGCCGAGGGTTGAACGTTTATTCATCACAATTAGCTGCAGGCCGAGGGTaGAACGTTTATTCATCACAA +
Preference number: 5 (lower is better)
Translates to: GLATLAAGRGLNVYSSQLAAGRG*NVYSSQ
Trigger: TTGTGATGAATAAACGTTCAACCCTCGGCCTGCAGC...TAATTGTGATGAATAAACGTTCAACCCTCGGCCTGCAGCCAGAGTAGCCAGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324685.11
ENST00000357890.9
CDS-3UTR CAA 90 bp TGTTGGTTCAGCACCTGCAAGATGAGGAAGGTGACTGCAGCAACCTTAGAGCTTGTGCTTATTGAGCTTTaGCTCTCGCTTCCGCAGCTT +
Preference number: 5 (lower is better)
Translates to: CWFSTCKMRKVTAATLELVLIEL*LSLPQL
Trigger: AAGCTGCGGAAGCGAGAGCAAAAGCTCAATAAGCAC...AAGCTCTAAGGTTGCTGCAGTCACCTTCCTCATCTTGCAGGTGCTGAACCAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR CAA 90 bp TTTTCCTTAGGGTTAGGATGCATCCACGGAGACAGACAGGTTAGGGCCAGTTTCCTTGCCAATCTCAGCTaGTACTTCTCGAAGCTTCCG +
Preference number: 5 (lower is better)
Translates to: FSLGLGCIHGDRQVRASFLANLS*YFSKLP
Trigger: CGGAAGCTTCGAGAAGTACAAGCTGAGATTGGCAAG...GAAACTGGCCCTAACCTGTCTGTCTCCGTGGATGCATCCTAACCCTAAGGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR CAA 90 bp TTGGGAAGGGGCCTGATTAGAATAGAAACTGATGATGTTGGTTCAGCACCTGCATTGGTTTCTTCCACCTaGGCCTTCTCCCGATCAGCC +
Preference number: 5 (lower is better)
Translates to: LGRGLIRIETDDVGSAPALVSST*AFSRSA
Trigger: GGCTGATCGGGAGAAGGCCAAGGTGGAAGAAACCAA...TGCAGGTGCTGAACCAACATCATCAGTTTCTATTCTAATCAGGCCCCTTCCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR CAA 90 bp TATTCATCACAATTAACAGCCTATACAAGCATCTCTAGAACAGAGGCTGTGGGTGAACTCCATTCGGCCTaGCAGCTCCAGCTCCACCTC +
Preference number: 5 (lower is better)
Translates to: YSSQLTAYTSISRTEAVGELHSA*QLQLHL
Trigger: GAGGTGGAGCTGGAGCTGCAAGGCCGAATGGAGTTC...ACCCACAGCCTCTGTTCTAGAGATGCTTGTATAGGCTGTTAATTGTGATGAATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR CAA 90 bp CACCTGCAAGATGAGGAAGGTGACTGCAGCAACCTTAGAGCTTCCCAAAGGAAGCTGGTGGTTGTGGTTTaGAAGACTACTAATCAGGTG +
Preference number: 5 (lower is better)
Translates to: HLQDEEGDCSNLRASQRKLVVVV*KTTNQV
Trigger: CACCTGATTAGTAGTCTTCAAAACCACAACCACCAG...CTTCCTTTGGGAAGCTCTAAGGTTGCTGCAGTCACCTTCCTCATCTTGCAGGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR CAA 90 bp TATTCATCACAATTAACAGCCTATACAAGCATCTCTAGAACAGAGGCTGTGGGTTCTCCCGATCAGCCCTaGAGAGAGCGGAGGCTACAG +
Preference number: 5 (lower is better)
Translates to: YSSQLTAYTSISRTEAVGSPDQP*RERRLQ
Trigger: CTGTAGCCTCCGCTCTCTCAAGGGCTGATCGGGAGA...ACCCACAGCCTCTGTTCTAGAGATGCTTGTATAGGCTGTTAATTGTGATGAATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR CAA 90 bp AAATGGAGATTGGGAAGGGGCCTGATTAGAATAGAAACTGATGATGTTGGTTCAGCAAGTCCTCCACTGTaGTCTCCATCTCCAGCACCT +
Preference number: 5 (lower is better)
Translates to: KWRLGRGLIRIETDDVGSASPPL*SPSPAP
Trigger: AGGTGCTGGAGATGGAGACAACAGTGGAGGACTTGC...TGAACCAACATCATCAGTTTCTATTCTAATCAGGCCCCTTCCCAATCTCCATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR CAA 90 bp CCTTTAGCGCAGATATCTAGAGAGACGATGCGGAATTACTTGGCATCTACTCAAGTGCTTATTGAGCTTTaGCTCTCGCTTCCGCAGCTT +
Preference number: 5 (lower is better)
Translates to: PLAQISRETMRNYLASTQVLIEL*LSLPQL
Trigger: AAGCTGCGGAAGCGAGAGCAAAAGCTCAATAAGCAC...TTGAGTAGATGCCAAGTAATTCCGCATCGTCTCTCTAGATATCTGCGCTAAAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324685.11
CDS-3UTR CAA 90 bp GGCCGAGGGTTGAACGTTTATTCATCACAATTAACAGCCTATACAAGCATCTCTTCTGATTCCTTCCGCTaGGTTTCTTCCACCTTGGCC +
Preference number: 5 (lower is better)
Translates to: GRGLNVYSSQLTAYTSISSDSFR*VSSTLA
Trigger: GGCCAAGGTGGAAGAAACCAAGCGGAAGGAATCAGA...AGAGATGCTTGTATAGGCTGTTAATTGTGATGAATAAACGTTCAACCCTCGGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324685.11
ENST00000357890.9
CDS-3UTR CAA 90 bp TGCAGGCCGAGGGTTGAACGTTTATTCATCACAATTAACAGCCTATACAAGCATTCCTTGGGCGCTGACTaGTACATATCCAGCAGCAGT +
Preference number: 5 (lower is better)
Translates to: CRPRVERLFITINSLYKHSLGAD*YISSSS
Trigger: ACTGCTGCTGGATATGTACAAGTCAGCGCCCAAGGA...ATGCTTGTATAGGCTGTTAATTGTGATGAATAAACGTTCAACCCTCGGCCTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324685.11
ENST00000357890.9
CDS-3UTR CAA 90 bp TGCAGGCCGAGGGTTGAACGTTTATTCATCACAATTAACAGCCTATACAAGCATTCTGCCAGGTGCTTATaGAGCTTTTGCTCTCGCTTC +
Preference number: 5 (lower is better)
Translates to: CRPRVERLFITINSLYKHSARCL*SFCSRF
Trigger: GAAGCGAGAGCAAAAGCTCAATAAGCACCTGGCAGA...ATGCTTGTATAGGCTGTTAATTGTGATGAATAAACGTTCAACCCTCGGCCTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324685.11
ENST00000357890.9
CDS-3UTR CAA 90 bp TATTCATCACAATTAACAGCCTATACAAGCATCTCTAGAACAGAGGCTGTGGGTTCTGATTCCTTCCGCTaGGTTTCTTCCACCTTGGCC +
Preference number: 5 (lower is better)
Translates to: YSSQLTAYTSISRTEAVGSDSFR*VSSTLA
Trigger: GGCCAAGGTGGAAGAAACCAAGCGGAAGGAATCAGA...ACCCACAGCCTCTGTTCTAGAGATGCTTGTATAGGCTGTTAATTGTGATGAATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS-3UTR CAA 90 bp AAATGGAGATTGGGAAGGGGCCTGATTAGAATAGAAACTGATGATGTTGGTTCAGCTGCAGGCCGAGGGTaGAACGTTTATTCATCACAA +
Preference number: 5 (lower is better)
Translates to: KWRLGRGLIRIETDDVGSAAGRG*NVYSSQ
Trigger: TTGTGATGAATAAACGTTCAACCCTCGGCCTGCAGC...TGAACCAACATCATCAGTTTCTATTCTAATCAGGCCCCTTCCCAATCTCCATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324685.11
ENST00000357890.9
CDS-3UTR CAA 90 bp AAATGGAGATTGGGAAGGGGCCTGATTAGAATAGAAACTGATGATGTTGGTTCACGCTCTGCCAGTTTCTaGTTCTTGAACTGTAGTACC +
Preference number: 5 (lower is better)
Translates to: KWRLGRGLIRIETDDVGSRSASF*FLNCST
Trigger: GGTACTACAGTTCAAGAACAAGAAACTGGCAGAGCG...TGAACCAACATCATCAGTTTCTATTCTAATCAGGCCCCTTCCCAATCTCCATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000563683.5
CDS GCA 72 bp GGGGCCCTGAGCCCCCGTCGCCGGCGGCGCGTTTGTTaGCTGGCCCAGACATGGCCGCGGCGGCTGGAGCGA +
Preference number: 6 (lower is better)
Translates to: GALSPRRRRRVC*LAQTWPRRLER
Trigger: TCGCTCCAGCCGCCGCGGCCATGTCTGGGCCAGGCAACAAACGCGCCGCCGGCGACGGGGGCTCAGGGCCCC
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000493683.5
ENST00000563683.5
ENST00000563909.5
ENST00000566811.5
CDS GCA 72 bp GGGGCCCTGAGCCCCCGTCGCCGGCGGCGCGTTTGTTaGCTGGCCCAGACATGGCCGCGGCGGCAGCAGGAG +
Preference number: 6 (lower is better)
Translates to: GALSPRRRRRVC*LAQTWPRRQQE
Trigger: CTCCTGCTGCCGCCGCGGCCATGTCTGGGCCAGGCAACAAACGCGCCGCCGGCGACGGGGGCTCAGGGCCCC
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000565931.1
CDS CAA 90 bp AGACGCCCCCACGGATTCGCCCCGCCGCGCCTCTCCGCGCGTAGATaGGCCGGAGCGAGGCGAACGGGCCCGGCCTTGGTAGCCGCCGAC +
Preference number: 6 (lower is better)
Translates to: RRPHGFAPPRLSARR*AGARRTGPALVAAD
Trigger: GTCGGCGGCTACCAAGGCCGGGCCCGTTCGCCTCGCTCCGGCCAATCTACGCGCGGAGAGGCGCGGCGGGGCGAATCCGTGGGGGCGTCT
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000563909.5
CDS CAA 72 bp CACGGATTCGCCCCGCCGCGCCTCTCCGCGCGTAGATaGGCCGGAGCGAGGCGAACGGGCCCGGCCTTGGTA +
Preference number: 6 (lower is better)
Translates to: HGFAPPRLSARR*AGARRTGPALV
Trigger: TACCAAGGCCGGGCCCGTTCGCCTCGCTCCGGCCAATCTACGCGCGGAGAGGCGCGGCGGGGCGAATCCGTG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563909.5
CDS CAA 90 bp CTCTCCGCGCGTAGATTGGCCGGAGCGAGGCGAACGGGCCCGGCCTaGGTAGCCGCCGACCGAGCGCTGGCTGTCCTGGAACCTAGGCGG +
Preference number: 6 (lower is better)
Translates to: LSARRLAGARRTGPA*VAADRALAVLEPRR
Trigger: CCGCCTAGGTTCCAGGACAGCCAGCGCTCGGTCGGCGGCTACCAAGGCCGGGCCCGTTCGCCTCGCTCCGGCCAATCTACGCGCGGAGAG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563909.5
CDS CAA 90 bp GGTGGAGGTCCTAGGCTGGGACCTTCCCGTTCCCGAAGCTCCCGCTaGGGCCTGGCCTCAGGTTCTCGGCCCCGGGAGGAAGGGCCCTGG +
Preference number: 6 (lower is better)
Translates to: GGGPRLGPSRSRSSR*GLASGSRPREEGPW
Trigger: CCAGGGCCCTTCCTCCCGGGGCCGAGAACCTGAGGCCAGGCCCAAGCGGGAGCTTCGGGAACGGGAAGGTCCCAGCCTAGGACCTCCACC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000493683.5
ENST00000563683.5
ENST00000564260.1
CDS TCA 72 bp CGCCGGTTCTCACGGCCCAGCTCTCGGGTGTGTGCCTaGGCCGCCTCACTGAGGGGCTCACTGTCCCCTCGG +
Preference number: 6 (lower is better)
Translates to: RRFSRPSSRVCA*AASLRGSLSPR
Trigger: CCGAGGGGACAGTGAGCCCCTCAGTGAGGCGGCTCAGGCACACACCCGAGAGCTGGGCCGTGAGAACCGGCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000493683.5
ENST00000563683.5
ENST00000565995.5
CDS CCA 72 bp TGGGACCTTCCCGTTCCCGAAGCTCCCGCTTGGGCCTaGCCTCAGGTTCTCGGCCCCGGGAGGAAGGGCCCT +
Preference number: 6 (lower is better)
Translates to: WDLPVPEAPAWA*PQVLGPGRKGP
Trigger: AGGGCCCTTCCTCCCGGGGCCGAGAACCTGAGGCCAGGCCCAAGCGGGAGCTTCGGGAACGGGAAGGTCCCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000493683.5
ENST00000563683.5
ENST00000564260.1
CDS CAA 72 bp CGTAGATTGGCCGGAGCGAGGCGAACGGGCCCGGCCTaGGTAGCCGCCGACCGAGCGCTGGCTGTCCTGGAA +
Preference number: 6 (lower is better)
Translates to: RRLAGARRTGPA*VAADRALAVLE
Trigger: TTCCAGGACAGCCAGCGCTCGGTCGGCGGCTACCAAGGCCGGGCCCGTTCGCCTCGCTCCGGCCAATCTACG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563909.5
CDS TCA 72 bp ACATGGCCGCGGCGGCTGGAGCGATGCAGGGTCCCCTaGGGGGCGTCAAACGGGAGGAGGCGGTACTTCCGT +
Preference number: 6 (lower is better)
Translates to: TWPRRLERCRVP*GASNGRRRYFR
Trigger: ACGGAAGTACCGCCTCCTCCCGTTTGACGCCCCTCAGGGGACCCTGCATCGCTCCAGCCGCCGCGGCCATGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000493683.5
ENST00000563683.5
ENST00000563909.5
ENST00000566811.5
CDS CCA 72 bp GCGTTTGTTGCCTGGCCCAGACATGGCCGCGGCGGCTaGAGCGATGCAGGGTCCCCTGAGGGGCGTCAAACG +
Preference number: 6 (lower is better)
Translates to: AFVAWPRHGRGG*SDAGSPEGRQT
Trigger: CGTTTGACGCCCCTCAGGGGACCCTGCATCGCTCCAGCCGCCGCGGCCATGTCTGGGCCAGGCAACAAACGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000493683.5
ENST00000563683.5
ENST00000563909.5
ENST00000566811.5
CDS CCA 72 bp CTAGGCTGGGACCTTCCCGTTCCCGAAGCTCCCGCTTaGGCCTGGCCTCAGGTTCTCGGCCCCGGGAGGAAG +
Preference number: 6 (lower is better)
Translates to: LGWDLPVPEAPA*AWPQVLGPGRK
Trigger: CTTCCTCCCGGGGCCGAGAACCTGAGGCCAGGCCCAAGCGGGAGCTTCGGGAACGGGAAGGTCCCAGCCTAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000493683.5
ENST00000563683.5
ENST00000564260.1
CDS TCA 72 bp GGCCCAGCTCTCGGGTGTGTGCCTGAGCCGCCTCACTaGGGGGCTCACTGTCCCCTCGGCTGTACACTCGCT +
Preference number: 6 (lower is better)
Translates to: GPALGCVPEPPH*GAHCPLGCTLA
Trigger: AGCGAGTGTACAGCCGAGGGGACAGTGAGCCCCTCAGTGAGGCGGCTCAGGCACACACCCGAGAGCTGGGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000493683.5
ENST00000563683.5
ENST00000565995.5
CDS CCA 72 bp TTCTCACGAGCAGCCCGGCTCTCTGCCAGGCAGGGCTaGATCTCCCGCAGCCGAGTCTGCACGTGCTCCAGC +
Preference number: 6 (lower is better)
Translates to: FSRAARLSARQG*ISRSRVCTCSS
Trigger: GCTGGAGCACGTGCAGACTCGGCTGCGGGAGATCCAGCCCTGCCTGGCAGAGAGCCGGGCTGCTCGTGAGAA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000493683.5
ENST00000563683.5
ENST00000567365.2
CDS CAA 72 bp TCCTTCCCTCACAAGCCCCCTTGGCAACCGTCGCCGTaGAGACGGAGGGAGACGCCCCCACGGATTCGCCCC +
Preference number: 6 (lower is better)
Translates to: SFPHKPPWQPSP*RRRETPPRIRP
Trigger: GGGGCGAATCCGTGGGGGCGTCTCCCTCCGTCTCAACGGCGACGGTTGCCAAGGGGGCTTGTGAGGGAAGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000563909.5
CDS CAA 90 bp CAGCTGGGCGGCTTCTACAGCCTTCCGCTTGTTGAGCTCCAGGGCTaGGCTGCGCAGCGTCAGCTCCTTCTCCACACCCCCGAGGCTGCC +
Preference number: 6 (lower is better)
Translates to: QLGGFYSLPLVELQG*AAQRQLLLHTPEAA
Trigger: GGCAGCCTCGGGGGTGTGGAGAAGGAGCTGACGCTGCGCAGCCAAGCCCTGGAGCTCAACAAGCGGAAGGCTGTAGAAGCCGCCCAGCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000493683.5
ENST00000563683.5
ENST00000567365.2
CDS CAA 90 bp TGGCGTGAGCCTGCGCTTTCCGCCTTCCTTCCCTCACAAGCCCCCTaGGCAACCGTCGCCGTTGAGACGGAGGGAGACGCCCCCACGGAT +
Preference number: 6 (lower is better)
Translates to: WREPALSAFLPSQAP*ATVAVETEGDAPTD
Trigger: ATCCGTGGGGGCGTCTCCCTCCGTCTCAACGGCGACGGTTGCCAAGGGGGCTTGTGAGGGAAGGAAGGCGGAAAGCGCAGGCTCACGCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000563909.5
CDS GCA 72 bp GGCGGCGGCCATACCTGGGACTTGAGGCCAAGGACCTaGTCGCCCAACTCATCCTTCTCCTCCCGCAGCAGC +
Preference number: 6 (lower is better)
Translates to: GGGHTWDLRPRT*SPNSSFSSRSS
Trigger: GCTGCTGCGGGAGGAGAAGGATGAGTTGGGCGAGCAGGTCCTTGGCCTCAAGTCCCAGGTATGGCCGCCGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493683.5
CDS CCA 72 bp GATGGAAGTCGTGGGCACCAAAGGCCGCGTTGCACTTaGGGCACTTCCTCTGGCGGGCCTCATAGCGGCCCC +
Preference number: 6 (lower is better)
Translates to: DGSRGHQRPRCT*GTSSGGPHSGP
Trigger: GGGGCCGCTATGAGGCCCGCCAGAGGAAGTGCCCCAAGTGCAACGCGGCCTTTGGTGCCCACGACTTCCATC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000493683.5
ENST00000563683.5
CDS CCA 72 bp TTGAGAGAGCGGAGGCTACAGGTGGAGGTCCTAGGCTaGGACCTTCCCGTTCCCGAAGCTCCCGCTTGGGCC +
Preference number: 6 (lower is better)
Translates to: LRERRLQVEVLG*DLPVPEAPAWA
Trigger: GGCCCAAGCGGGAGCTTCGGGAACGGGAAGGTCCCAGCCTAGGACCTCCACCTGTAGCCTCCGCTCTCTCAA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000493683.5
ENST00000563683.5
ENST00000564260.1
CDS CAA 90 bp CTCTCCAGCTCCAGTCTGCAAGCTGGCGGCGGCCATACCTGGGACTaGAGGCCAAGGACCTGCTCGCCCAACTCATCCTTCTCCTCCCGC +
Preference number: 6 (lower is better)
Translates to: LSSSSLQAGGGHTWD*RPRTCSPNSSFSSR
Trigger: GCGGGAGGAGAAGGATGAGTTGGGCGAGCAGGTCCTTGGCCTCAAGTCCCAGGTATGGCCGCCGCCAGCTTGCAGACTGGAGCTGGAGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493683.5
CDS GCA 72 bp AAAGCCAAGGCCGGCTCACTGAGAGGGGGCCGCAGCTaGATCAGCAAGGGGTCTCTCAGCTCTGATGTCCCC +
Preference number: 6 (lower is better)
Translates to: KAKAGSLRGGRS*ISKGSLSSDVP
Trigger: GGGGACATCAGAGCTGAGAGACCCCTTGCTGATGCAGCTGCGGCCCCCTCTCAGTGAGCCGGCCTTGGCTTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000493683.5
ENST00000563683.5
CDS GCA 72 bp CTCCAGCTCCACCTCCTCACTGCTGCTGGCACCCAGTaGCACCACAAAAGCCAAGGCCGGCTCACTGAGAGG +
Preference number: 6 (lower is better)
Translates to: LQLHLLTAAGTQ*HHKSQGRLTER
Trigger: CCTCTCAGTGAGCCGGCCTTGGCTTTTGTGGTGGCACTGGGTGCCAGCAGCAGTGAGGAGGTGGAGCTGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000493683.5
ENST00000563683.5
CDS GCA 72 bp TTGGTGGCACCCAGCTTGCGCTGCAGGTGTTCTATCTaGTCCTCTGCCTGCCGAATGCGCCGCAGGGCATCC +
Preference number: 6 (lower is better)
Translates to: LVAPSLRCRCSI*SSACRMRRRAS
Trigger: GGATGCCCTGCGGCGCATTCGGCAGGCAGAGGAGCAGATAGAACACCTGCAGCGCAAGCTGGGTGCCACCAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000493683.5
ENST00000563683.5
CDS GCA 72 bp TGCGCAGCGTCAGCTCCTTCTCCACACCCCCGAGGCTaGCCTGCAAGGCTCGCTCCTTCTCCTCTAGCTTCT +
Preference number: 6 (lower is better)
Translates to: CAASAPSPHPRG*PARLAPSPLAS
Trigger: AGAAGCTAGAGGAGAAGGAGCGAGCCTTGCAGGGCAGCCTCGGGGGTGTGGAGAAGGAGCTGACGCTGCGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000493683.5
ENST00000563683.5
ENST00000567365.2
CDS GCA 72 bp GTTGAAGCTCTCTTTCTCACGAGCAGCCCGGCTCTCTaGCAGGCAGGGCTGGATCTCCCGCAGCCGAGTCTG +
Preference number: 6 (lower is better)
Translates to: VEALFLTSSPAL*QAGLDLPQPSL
Trigger: CAGACTCGGCTGCGGGAGATCCAGCCCTGCCTGGCAGAGAGCCGGGCTGCTCGTGAGAAAGAGAGCTTCAAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000493683.5
ENST00000563683.5
ENST00000567365.2
CDS CCA 72 bp CCATGTGCTCGATGTGTCGCAGGTGGGAGTTCTTTGTaGCCAGCAGCAGGCCCCGAGCCTCGTCTAGCTGGG +
Preference number: 6 (lower is better)
Translates to: PCARCVAGGSSL*PAAGPEPRLAG
Trigger: CCCAGCTAGACGAGGCTCGGGGCCTGCTGCTGGCCACAAAGAACTCCCACCTGCGACACATCGAGCACATGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324685.11
ENST00000493683.5
ENST00000563683.5
ENST00000566703.1
CDS CCA 72 bp AGCTCGTCGCTCTCCATGTGCTCGATGTGTCGCAGGTaGGAGTTCTTTGTGGCCAGCAGCAGGCCCCGAGCC +
Preference number: 6 (lower is better)
Translates to: SSSLSMCSMCRR*EFFVASSRPRA
Trigger: GGCTCGGGGCCTGCTGCTGGCCACAAAGAACTCCCACCTGCGACACATCGAGCACATGGAGAGCGACGAGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000493683.5
ENST00000563683.5
CDS CCA 72 bp GCTTCTACAGCCTTCCGCTTGTTGAGCTCCAGGGCTTaGCTGCGCAGCGTCAGCTCCTTCTCCACACCCCCG +
Preference number: 6 (lower is better)
Translates to: ASTAFRLLSSRA*LRSVSSFSTPP
Trigger: CGGGGGTGTGGAGAAGGAGCTGACGCTGCGCAGCCAAGCCCTGGAGCTCAACAAGCGGAAGGCTGTAGAAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000493683.5
ENST00000563683.5
ENST00000567365.2
CDS CCA 72 bp TCCAGCTCCAGTCTGCAAGCTGGCGGCGGCCATACCTaGGACTTGAGGCCAAGGACCTGCTCGCCCAACTCA +
Preference number: 6 (lower is better)
Translates to: SSSSLQAGGGHT*DLRPRTCSPNS
Trigger: TGAGTTGGGCGAGCAGGTCCTTGGCCTCAAGTCCCAGGTATGGCCGCCGCCAGCTTGCAGACTGGAGCTGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493683.5
CDS CCA 72 bp CTCACCAGCAGGAGGGTCAGCCTAGCGCCGCCATCTTaGATTTCACCGGACGTCACTGGGCGTCACTGGACG +
Preference number: 6 (lower is better)
Translates to: LTSRRVSLAPPS*ISPDVTGRHWT
Trigger: CGTCCAGTGACGCCCAGTGACGTCCGGTGAAATCCAAGATGGCGGCGCTAGGCTGACCCTCCTGCTGGTGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566811.5
CDS CCA 72 bp CAGGGCCATACCTCCATGTGCTCGATGTGTCGCAGGTaGGAGTTCTTTGTGGCCAGCAGCAGGCCCCGAGCC +
Preference number: 6 (lower is better)
Translates to: QGHTSMCSMCRR*EFFVASSRPRA
Trigger: GGCTCGGGGCCTGCTGCTGGCCACAAAGAACTCCCACCTGCGACACATCGAGCACATGGAGGTATGGCCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566703.1
CDS CAA 72 bp GGCTTCTACAGCCTTCCGCTTGTTGAGCTCCAGGGCTaGGCTGCGCAGCGTCAGCTCCTTCTCCACACCCCC +
Preference number: 6 (lower is better)
Translates to: GFYSLPLVELQG*AAQRQLLLHTP
Trigger: GGGGGTGTGGAGAAGGAGCTGACGCTGCGCAGCCAAGCCCTGGAGCTCAACAAGCGGAAGGCTGTAGAAGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000493683.5
ENST00000563683.5
ENST00000567365.2
CDS CAA 72 bp CCTCACCAGCAGGAGGGTCAGCCTAGCGCCGCCATCTaGGATTTCACCGGACGTCACTGGGCGTCACTGGAC +
Preference number: 6 (lower is better)
Translates to: PHQQEGQPSAAI*DFTGRHWASLD
Trigger: GTCCAGTGACGCCCAGTGACGTCCGGTGAAATCCAAGATGGCGGCGCTAGGCTGACCCTCCTGCTGGTGAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566811.5
CDS CAA 90 bp GCTCGTCGCTCTCCATGTGCTCGATGTGTCGCAGGTGGGAGTTCTTaGTGGCCAGCAGCAGGCCCCGAGCCTCGTCTAGCTGGGTCTTCA +
Preference number: 6 (lower is better)
Translates to: ARRSPCARCVAGGSS*WPAAGPEPRLAGSS
Trigger: TGAAGACCCAGCTAGACGAGGCTCGGGGCCTGCTGCTGGCCACAAAGAACTCCCACCTGCGACACATCGAGCACATGGAGAGCGACGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000493683.5
ENST00000563683.5
CDS CAA 90 bp TCTGCCTGCCGAATGCGCCGCAGGGCATCCTCATCCGCGATCTTCTaGCTCTCCCTTCGATCCCTCTCCTCCAATTCCCGGATGCGGCTC +
Preference number: 6 (lower is better)
Translates to: SACRMRRRASSSAIF*LSLRSLSSNSRMRL
Trigger: GAGCCGCATCCGGGAATTGGAGGAGAGGGATCGAAGGGAGAGCAAGAAGATCGCGGATGAGGATGCCCTGCGGCGCATTCGGCAGGCAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000493683.5
ENST00000563683.5
CDS GCA 72 bp ACCTCGGCCTTAGCCTTGCGTTCCGCTGCCATGAGCTaGACCTTATCCCGCTGCTCCTTGGGCGCTGACTTG +
Preference number: 6 (lower is better)
Translates to: TSALALRSAAMS*TLSRCSLGADL
Trigger: CAAGTCAGCGCCCAAGGAGCAGCGGGATAAGGTGCAGCTCATGGCAGCGGAACGCAAGGCTAAGGCCGAGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000493683.5
ENST00000563683.5
CDS GCA 72 bp GCCTCCTCCTCCTGCTTGGTGGCACCCAGCTTGCGCTaGAGGTGTTCTATCTGCTCCTCTGCCTGCCGAATG +
Preference number: 6 (lower is better)
Translates to: ASSSCLVAPSLR*RCSICSSACRM
Trigger: CATTCGGCAGGCAGAGGAGCAGATAGAACACCTGCAGCGCAAGCTGGGTGCCACCAAGCAGGAGGAGGAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000493683.5
ENST00000563683.5
CDS CAA 72 bp AGCAGAGCCTCCTCCTCCTGCTTGGTGGCACCCAGCTaGCGCTGCAGGTGTTCTATCTGCTCCTCTGCCTGC +
Preference number: 6 (lower is better)
Translates to: SRASSSCLVAPS*RCRCSICSSAC
Trigger: GCAGGCAGAGGAGCAGATAGAACACCTGCAGCGCAAGCTGGGTGCCACCAAGCAGGAGGAGGAGGCTCTGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000493683.5
ENST00000563683.5
CDS CAA 72 bp TCCAGTCTGCAAGCTGGCGGCGGCCATACCTGGGACTaGAGGCCAAGGACCTGCTCGCCCAACTCATCCTTC +
Preference number: 6 (lower is better)
Translates to: SSLQAGGGHTWD*RPRTCSPNSSF
Trigger: GAAGGATGAGTTGGGCGAGCAGGTCCTTGGCCTCAAGTCCCAGGTATGGCCGCCGCCAGCTTGCAGACTGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493683.5
CDS CAA 72 bp CCTCCATGTGCTCGATGTGTCGCAGGTGGGAGTTCTTaGTGGCCAGCAGCAGGCCCCGAGCCTCGTCTAGCT +
Preference number: 6 (lower is better)
Translates to: PPCARCVAGGSS*WPAAGPEPRLA
Trigger: AGCTAGACGAGGCTCGGGGCCTGCTGCTGGCCACAAAGAACTCCCACCTGCGACACATCGAGCACATGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566703.1
CDS CAA 90 bp CTCTACCACACGAGACACAGCTGCCTTGGAGAACTCCATTCGGCCTaGCAGCTCCAGCTCCACCTCCTCACTGCTGCTGGCACCCAGTGC +
Preference number: 6 (lower is better)
Translates to: LYHTRHSCLGELHSA*QLQLHLLTAAGTQC
Trigger: GCACTGGGTGCCAGCAGCAGTGAGGAGGTGGAGCTGGAGCTGCAAGGCCGAATGGAGTTCTCCAAGGCAGCTGTGTCTCGTGTGGTAGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000493683.5
ENST00000563683.5
CDS CAA 90 bp AGGGCCATACCTCCATGTGCTCGATGTGTCGCAGGTGGGAGTTCTTaGTGGCCAGCAGCAGGCCCCGAGCCTCGTCTAGCTGGGTCTTCA +
Preference number: 6 (lower is better)
Translates to: RAIPPCARCVAGGSS*WPAAGPEPRLAGSS
Trigger: TGAAGACCCAGCTAGACGAGGCTCGGGGCCTGCTGCTGGCCACAAAGAACTCCCACCTGCGACACATCGAGCACATGGAGGTATGGCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566703.1
CDS TCA 72 bp CCTTGCGTACCTGGGCCAGCGTGTCCTCCAGCTGAATaGCCTCTGTGCGTAGCTTCTTCTGCAGCCCCAGCT +
Preference number: 6 (lower is better)
Translates to: PCVPGPACPPAE*PLCVASSAAPA
Trigger: AGCTGGGGCTGCAGAAGAAGCTACGCACAGAGGTCATTCAGCTGGAGGACACGCTGGCCCAGGTACGCAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000493683.5
ENST00000563683.5
CDS TCA 72 bp TCACGTATCTGCGCGTTCTCTTCGCTCCCACTGGCGTaGGCCTGCGCTTTCCGCCTTCCTTCCCTCACAAGC +
Preference number: 6 (lower is better)
Translates to: SRICAFSSLPLA*ACAFRLPSLTS
Trigger: GCTTGTGAGGGAAGGAAGGCGGAAAGCGCAGGCTCACGCCAGTGGGAGCGAAGAGAACGCGCAGATACGTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563909.5
CDS TCA 72 bp GCTTCTTCTGCAGCCCCAGCTCGTCGCTCTGTGGGTTaGTGTGTTAAGGACCCACACAGCCCCTCGGTCCCA +
Preference number: 6 (lower is better)
Translates to: ASSAAPARRSVG*CVKDPHSPSVP
Trigger: TGGGACCGAGGGGCTGTGTGGGTCCTTAACACATCAACCCACAGAGCGACGAGCTGGGGCTGCAGAAGAAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566703.1
CDS GCA 72 bp CGAGACACAGCTGCCTTGGAGAACTCCATTCGGCCTTaGAGCTCCAGCTCCACCTCCTCACTGCTGCTGGCA +
Preference number: 6 (lower is better)
Translates to: RDTAALENSIRP*SSSSTSSLLLA
Trigger: TGCCAGCAGCAGTGAGGAGGTGGAGCTGGAGCTGCAAGGCCGAATGGAGTTCTCCAAGGCAGCTGTGTCTCG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000493683.5
ENST00000563683.5
CDS GCA 72 bp CAGCTCATCAACCTCGGCCTTAGCCTTGCGTTCCGCTaGCATGAGCTGCACCTTATCCCGCTGCTCCTTGGG +
Preference number: 6 (lower is better)
Translates to: QLINLGLSLAFR*HELHLIPLLLG
Trigger: CCCAAGGAGCAGCGGGATAAGGTGCAGCTCATGGCAGCGGAACGCAAGGCTAAGGCCGAGGTTGATGAGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000493683.5
ENST00000563683.5
CDS GCA 72 bp CTGCGTAGACCTCCACCTTCCTCTGCTTTTCCAGCTTaGGCCGCAGCCGTGAGATGTCCTCCTGAGCCCTCT +
Preference number: 6 (lower is better)
Translates to: LRRPPPSSAFPA*AAAVRCPPEPS
Trigger: AGAGGGCTCAGGAGGACATCTCACGGCTGCGGCGCAAGCTGGAAAAGCAGAGGAAGGTGGAGGTCTACGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000493683.5
ENST00000563683.5
ENST00000567365.2
CDS GCA 72 bp AGATACGATGGAAGTCGTGGGCACCAAAGGCCGCGTTaGACTTGGGGCACTTCCTCTGGCGGGCCTCATAGC +
Preference number: 6 (lower is better)
Translates to: RYDGSRGHQRPR*TWGTSSGGPHS
Trigger: GCTATGAGGCCCGCCAGAGGAAGTGCCCCAAGTGCAACGCGGCCTTTGGTGCCCACGACTTCCATCGTATCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000493683.5
ENST00000563683.5
CDS CCA 72 bp GCCTCAGGCGCTGAAGACAGCTCCCCCTGGCTCTCATaGCATCGGAGAAGGGCTTCCACAGTTTCATCCAGC +
Preference number: 6 (lower is better)
Translates to: ASGAEDSSPWLS*HRRRASTVSSS
Trigger: GCTGGATGAAACTGTGGAAGCCCTTCTCCGATGCCATGAGAGCCAGGGGGAGCTGTCTTCAGCGCCTGAGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000493683.5
ENST00000563683.5
ENST00000565931.1
ENST00000566811.5
CDS CCA 72 bp CCAATGAGATGCGGTGGTGTTTCTCCTGCAGCTGAGTaGCCAAGTCCTGCAGTCGCCGGTTCTCACGGCCCA +
Preference number: 6 (lower is better)
Translates to: PMRCGGVSPAAE*PSPAVAGSHGP
Trigger: TGGGCCGTGAGAACCGGCGACTGCAGGACTTGGCCACTCAGCTGCAGGAGAAACACCACCGCATCTCATTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000493683.5
ENST00000563683.5
ENST00000565995.5
CDS CCA 72 bp CGGTACTTCCGTCACCTGGAAGAGAGGGCGCCCAGGTaGGCACTCGCAACTTCTCACGTATCTGCGCGTTCT +
Preference number: 6 (lower is better)
Translates to: RYFRHLEERAPR*ALATSHVSARS
Trigger: AGAACGCGCAGATACGTGAGAAGTTGCGAGTGCCCACCTGGGCGCCCTCTCTTCCAGGTGACGGAAGTACCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563909.5
CDS CCA 72 bp TTGCGGGTGTTACAGCAGGGGCAGGTCAACCGCGCCTaGGCCAGGCAAAGGCATCAGCTTGGGAACAACTCT +
Preference number: 6 (lower is better)
Translates to: LRVLQQGQVNRA*ARQRHQLGNNS
Trigger: AGAGTTGTTCCCAAGCTGATGCCTTTGCCTGGCCCAGGCGCGGTTGACCTGCCCCTGCTGTAACACCCGCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567365.2
CDS CAA 72 bp TCTCCATGTGCTCGATGTGTCGCAGGTGGGAGTTCTTaGTGGCCAGCAGCAGGCCCCGAGCCTCGTCTAGCT +
Preference number: 6 (lower is better)
Translates to: SPCARCVAGGSS*WPAAGPEPRLA
Trigger: AGCTAGACGAGGCTCGGGGCCTGCTGCTGGCCACAAAGAACTCCCACCTGCGACACATCGAGCACATGGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000493683.5
ENST00000563683.5
CDS CAA 72 bp GCCACTGGCCTGGGCCCGGAGCTTGCCAATCTCAGCTaGTACTTCTCGAAGCTTCCGCTTGTATCGCTGGGC +
Preference number: 6 (lower is better)
Translates to: ATGLGPELANLS*YFSKLPLVSLG
Trigger: GCCCAGCGATACAAGCGGAAGCTTCGAGAAGTACAAGCTGAGATTGGCAAGCTCCGGGCCCAGGCCAGTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000493683.5
ENST00000563683.5
ENST00000564260.1
CDS CAA 72 bp CGAATGCGCCGCAGGGCATCCTCATCCGCGATCTTCTaGCTCTCCCTTCGATCCCTCTCCTCCAATTCCCGG +
Preference number: 6 (lower is better)
Translates to: RMRRRASSSAIF*LSLRSLSSNSR
Trigger: CCGGGAATTGGAGGAGAGGGATCGAAGGGAGAGCAAGAAGATCGCGGATGAGGATGCCCTGCGGCGCATTCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000493683.5
ENST00000563683.5
CDS CAA 90 bp GGCACACAGGGCCTCGGAAGGCACAAACACGTCAACACTAACGGTTaGGCCCTTAGCCCAGCCCTAACGCCTGTTCCAGGGCCATACCTC +
Preference number: 6 (lower is better)
Translates to: GTQGLGRHKHVNTNG*ALSPALTPVPGPYL
Trigger: GAGGTATGGCCCTGGAACAGGCGTTAGGGCTGGGCTAAGGGCCAAACCGTTAGTGTTGACGTGTTTGTGCCTTCCGAGGCCCTGTGTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566703.1
CDS GCA 72 bp ACTCGTTGTAGAGCAGTGAGAATTGGGCCTGCAGCATaGGGTACTCCCCCGTCTCCCGCACTACCTCCTCAG +
Preference number: 6 (lower is better)
Translates to: TRCRAVRIGPAA*GTPPSPALPPQ
Trigger: CTGAGGAGGTAGTGCGGGAGACGGGGGAGTACCGCATGCTGCAGGCCCAATTCTCACTGCTCTACAACGAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324685.11
ENST00000493683.5
ENST00000563683.5
ENST00000566703.1
CDS GCA 72 bp GAATGCGCCGCAGGGCATCCTCATCCGCGATCTTCTTaGTCTCCCTTCGATCCCTCTCCTCCAATTCCCGGA +
Preference number: 6 (lower is better)
Translates to: ECAAGHPHPRSS*SPFDPSPPIPG
Trigger: TCCGGGAATTGGAGGAGAGGGATCGAAGGGAGAGCAAGAAGATCGCGGATGAGGATGCCCTGCGGCGCATTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000493683.5
ENST00000563683.5
CDS CCA 72 bp GGTCTGAGGCCTCTACCACACGAGACACAGCTGCCTTaGAGAACTCCATTCGGCCTTGCAGCTCCAGCTCCA +
Preference number: 6 (lower is better)
Translates to: GLRPLPHETQLP*RTPFGLAAPAP
Trigger: TGGAGCTGGAGCTGCAAGGCCGAATGGAGTTCTCCAAGGCAGCTGTGTCTCGTGTGGTAGAGGCCTCAGACC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000493683.5
ENST00000563683.5
ENST00000565995.5
CDS CCA 72 bp ACTTCTCACGTATCTGCGCGTTCTCTTCGCTCCCACTaGCGTGAGCCTGCGCTTTCCGCCTTCCTTCCCTCA +
Preference number: 6 (lower is better)
Translates to: TSHVSARSLRSH*REPALSAFLPS
Trigger: TGAGGGAAGGAAGGCGGAAAGCGCAGGCTCACGCCAGTGGGAGCGAAGAGAACGCGCAGATACGTGAGAAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563909.5
CDS CAA 72 bp TGGTTTCTTCCACCTTGGCCTTCTCCCGATCAGCCCTaGAGAGAGCGGAGGCTACAGGTGGAGGTCCTAGGC +
Preference number: 6 (lower is better)
Translates to: WFLPPWPSPDQP*RERRLQVEVLG
Trigger: GCCTAGGACCTCCACCTGTAGCCTCCGCTCTCTCAAGGGCTGATCGGGAGAAGGCCAAGGTGGAAGAAACCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000493683.5
ENST00000563683.5
ENST00000564260.1
CDS CAA 72 bp GGCCTCGGAAGGCACAAACACGTCAACACTAACGGTTaGGCCCTTAGCCCAGCCCTAACGCCTGTTCCAGGG +
Preference number: 6 (lower is better)
Translates to: GLGRHKHVNTNG*ALSPALTPVPG
Trigger: CCCTGGAACAGGCGTTAGGGCTGGGCTAAGGGCCAAACCGTTAGTGTTGACGTGTTTGTGCCTTCCGAGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566703.1
CDS TCA 72 bp TACTCCAATGAGATGCGGTGGTGTTTCTCCTGCAGCTaGGTGGCCAAGTCCTGCAGTCGCCGGTTCTCACGG +
Preference number: 6 (lower is better)
Translates to: YSNEMRWCFSCS*VAKSCSRRFSR
Trigger: CCGTGAGAACCGGCGACTGCAGGACTTGGCCACTCAGCTGCAGGAGAAACACCACCGCATCTCATTGGAGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000493683.5
ENST00000563683.5
ENST00000565995.5
CDS GCA 72 bp AGCCCCCTGAAGTTCGGCCTGCAGTTTCTCCAGCTCTaGCATACGGCTGTTGGCCAGTTCCTGGTTTTCCTC +
Preference number: 6 (lower is better)
Translates to: SPLKFGLQFLQL*HTAVGQFLVFL
Trigger: GAGGAAAACCAGGAACTGGCCAACAGCCGTATGGCAGAGCTGGAGAAACTGCAGGCCGAACTTCAGGGGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324685.11
ENST00000493683.5
ENST00000566703.1
CDS TCA 72 bp CTGGGTCTTCACTTGCAGAGACTCGTTGTAGAGCAGTaGGAATTGGGCCTGCAGCATGCGGTACTCCCCCGT +
Preference number: 6 (lower is better)
Translates to: LGLHLQRLVVEQ*ELGLQHAVLPR
Trigger: ACGGGGGAGTACCGCATGCTGCAGGCCCAATTCTCACTGCTCTACAACGAGTCTCTGCAAGTGAAGACCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324685.11
ENST00000493683.5
ENST00000563683.5
ENST00000566703.1
CDS CAA 72 bp GCTCGGAGACCCTTGAGGAGTTCTGATTCCTTCCGCTaGGTTTCTTCCACCTTGGCCTTCTCCCGATCAGCC +
Preference number: 6 (lower is better)
Translates to: ARRPLRSSDSFR*VSSTLAFSRSA
Trigger: GGCTGATCGGGAGAAGGCCAAGGTGGAAGAAACCAAGCGGAAGGAATCAGAACTCCTCAAGGGTCTCCGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000493683.5
ENST00000563683.5
ENST00000564260.1
CDS CAA 72 bp AAAACGTGGAAGCACTTGGTAAGGACTGCATCCTTCTaGCGGGTGTTACAGCAGGGGCAGGTCAACCGCGCC +
Preference number: 6 (lower is better)
Translates to: KTWKHLVRTASF*RVLQQGQVNRA
Trigger: GGCGCGGTTGACCTGCCCCTGCTGTAACACCCGCAAGAAGGATGCAGTCCTTACCAAGTGCTTCCACGTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000493683.5
ENST00000563683.5
CDS CAA 90 bp AGACCCTTGAGGAGTTCTGATTCCTTCCGCTTGGTTTCTTCCACCTaGGCCTTCTCCCGATCAGCCCTTGAGAGAGCGGAGGCTACAGGT +
Preference number: 6 (lower is better)
Translates to: RPLRSSDSFRLVSST*AFSRSALERAEATG
Trigger: ACCTGTAGCCTCCGCTCTCTCAAGGGCTGATCGGGAGAAGGCCAAGGTGGAAGAAACCAAGCGGAAGGAATCAGAACTCCTCAAGGGTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000493683.5
ENST00000563683.5
ENST00000564260.1
CDS CAA 90 bp TCGAAGCAGAAAACGTGGAAGCACTTGGTAAGGACTGCATCCTTCTaGCGGGTGTTACAGCAGGGGCAGGTCAACCGCGCCTTGTACTCC +
Preference number: 6 (lower is better)
Translates to: SKQKTWKHLVRTASF*RVLQQGQVNRALYS
Trigger: GGAGTACAAGGCGCGGTTGACCTGCCCCTGCTGTAACACCCGCAAGAAGGATGCAGTCCTTACCAAGTGCTTCCACGTTTTCTGCTTCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000493683.5
ENST00000563683.5
CDS GCA 72 bp TTTTGCTCTCGCTTCCGCAGCTTCTCGATGTCCCACTaGAAGTCCTCCACTGTTGTCTCCATCTCCAGCACC +
Preference number: 6 (lower is better)
Translates to: FCSRFRSFSMSH*KSSTVVSISST
Trigger: GGTGCTGGAGATGGAGACAACAGTGGAGGACTTGCAGTGGGACATCGAGAAGCTGCGGAAGCGAGAGCAAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000493683.5
ENST00000563683.5
ENST00000565995.5
ENST00000566703.1
CDS GCA 72 bp TGCTCTAAGGCCTCTGCCAGGTGCTTATTGAGCTTTTaGTCTCGCTTCCGCAGCTTCTCGATGTCCCACTGC +
Preference number: 6 (lower is better)
Translates to: CSKASARCLLSF*SRFRSFSMSHC
Trigger: GCAGTGGGACATCGAGAAGCTGCGGAAGCGAGAGCAAAAGCTCAATAAGCACCTGGCAGAGGCCTTAGAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000493683.5
ENST00000563683.5
ENST00000565995.5
ENST00000566703.1
CDS CCA 72 bp ATCTTAGGAAGAATCTATTCCCCAGGGACCCCTGGCTaGCACACAGGGCCTCGGAAGGCACAAACACGTCAA +
Preference number: 6 (lower is better)
Translates to: ILGRIYSPGTPG*HTGPRKAQTRQ
Trigger: TTGACGTGTTTGTGCCTTCCGAGGCCCTGTGTGCCAGCCAGGGGTCCCTGGGGAATAGATTCTTCCTAAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566703.1
CDS CAA 72 bp AGGAGTTCTGATTCCTTCCGCTTGGTTTCTTCCACCTaGGCCTTCTCCCGATCAGCCCTTGAGAGAGCGGAG +
Preference number: 6 (lower is better)
Translates to: RSSDSFRLVSST*AFSRSALERAE
Trigger: CTCCGCTCTCTCAAGGGCTGATCGGGAGAAGGCCAAGGTGGAAGAAACCAAGCGGAAGGAATCAGAACTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000493683.5
ENST00000563683.5
ENST00000564260.1
CDS CAA 90 bp TTGAGCTCTGCTCGGAGACCCTTGAGGAGTTCTGATTCCTTCCGCTaGGTTTCTTCCACCTTGGCCTTCTCCCGATCAGCCCTTGAGAGA +
Preference number: 6 (lower is better)
Translates to: LSSARRPLRSSDSFR*VSSTLAFSRSALER
Trigger: TCTCTCAAGGGCTGATCGGGAGAAGGCCAAGGTGGAAGAAACCAAGCGGAAGGAATCAGAACTCCTCAAGGGTCTCCGAGCAGAGCTCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000493683.5
ENST00000563683.5
ENST00000564260.1
CDS GCA 72 bp CTCGAAGCAGAAAACGTGGAAGCACTTGGTAAGGACTaGATCCTTCTTGCGGGTGTTACAGCAGGGGCAGGT +
Preference number: 6 (lower is better)
Translates to: LEAENVEALGKD*ILLAGVTAGAG
Trigger: ACCTGCCCCTGCTGTAACACCCGCAAGAAGGATGCAGTCCTTACCAAGTGCTTCCACGTTTTCTGCTTCGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000493683.5
ENST00000563683.5
CDS CCA 72 bp TCCAGCACCTTGGTCTCTGCCGATGTCACTTTATCCTaGAGCTCGGAGTACTCCAATGAGATGCGGTGGTGT +
Preference number: 6 (lower is better)
Translates to: SSTLVSADVTLS*SSEYSNEMRWC
Trigger: ACACCACCGCATCTCATTGGAGTACTCCGAGCTCCAGGATAAAGTGACATCGGCAGAGACCAAGGTGCTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000493683.5
ENST00000563683.5
ENST00000565995.5
ENST00000566703.1
CDS CCA 72 bp GGAGCATCAGCAAGTAAAGGTGTCAGAACCAGTTCCTaGGTTAGGACTCCAACCCCTCAGTGGGGTAAGAGG +
Preference number: 6 (lower is better)
Translates to: GASASKGVRTSS*VRTPTPQWGKR
Trigger: CCTCTTACCCCACTGAGGGGTTGGAGTCCTAACCCAGGAACTGGTTCTGACACCTTTACTTGCTGATGCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564260.1
CDS TCA 72 bp CTTCTTGAGCTCTGCTCGGAGACCCTTGAGGAGTTCTaGTTCCTTCCGCTTGGTTTCTTCCACCTTGGCCTT +
Preference number: 6 (lower is better)
Translates to: LLELCSETLEEF*FLPLGFFHLGL
Trigger: AAGGCCAAGGTGGAAGAAACCAAGCGGAAGGAATCAGAACTCCTCAAGGGTCTCCGAGCAGAGCTCAAGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000493683.5
ENST00000563683.5
CDS GCA 72 bp CGATTGACGATGAGGAGTGTGGCATCATCTGTGGCCTaGCGCTTCTCCAACTTCTCAATTCGTTCTCGGAGT +
Preference number: 6 (lower is better)
Translates to: RLTMRSVASSVA*RFSNFSIRSRS
Trigger: ACTCCGAGAACGAATTGAGAAGTTGGAGAAGCGGCAGGCCACAGATGATGCCACACTCCTCATCGTCAATCG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000493683.5
ENST00000563683.5
ENST00000563909.5
ENST00000565931.1
ENST00000566811.5
CDS CAA 72 bp GAGTTAAGCTGCTCTAAGGCCTCTGCCAGGTGCTTATaGAGCTTTTGCTCTCGCTTCCGCAGCTTCTCGATG +
Preference number: 6 (lower is better)
Translates to: ELSCSKASARCL*SFCSRFRSFSM
Trigger: CATCGAGAAGCTGCGGAAGCGAGAGCAAAAGCTCAATAAGCACCTGGCAGAGGCCTTAGAGCAGCTTAACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000493683.5
ENST00000563683.5
ENST00000565995.5
ENST00000566703.1
CDS CAA 72 bp TTGCCAATCTCAGCTTGTACTTCTCGAAGCTTCCGCTaGTATCGCTGGGCGTCCCCTTTTAGCTGGTGGTTG +
Preference number: 6 (lower is better)
Translates to: LPISACTSRSFR*YRWASPFSWWL
Trigger: CAACCACCAGCTAAAAGGGGACGCCCAGCGATACAAGCGGAAGCTTCGAGAAGTACAAGCTGAGATTGGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000493683.5
ENST00000563683.5
ENST00000564260.1
CDS CAA 90 bp TCACAAGCCTGCCGTTGTTCCAGCCGCTCTGCCAGTTTCTTGTTCTaGAACTGTAGTACCTTCAGGTCCATCTCCTCCGTGGAAGAGATG +
Preference number: 6 (lower is better)
Translates to: SQACRCSSRSASFLF*NCSTFRSISSVEEM
Trigger: CATCTCTTCCACGGAGGAGATGGACCTGAAGGTACTACAGTTCAAGAACAAGAAACTGGCAGAGCGGCTGGAACAACGGCAGGCTTGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000324685.11
ENST00000357890.9
ENST00000493683.5
ENST00000563683.5
ENST00000563909.5
ENST00000565931.1
ENST00000566811.5