Pregenerated sensors for RNF4 (Homo sapiens)
Ensembl gene IDs: ENSG00000063978Ensembl transcript IDs: ENST00000502316.5, ENST00000503659.5, ENST00000504224.5, ENST00000504782.5, ENST00000506706.5, ENST00000508235.1, ENST00000509258.5, ENST00000511600.5, ENST00000541204.5
Found 103 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CTGGCTGGTCAAGGCCGCCATGCCTCTCCTCCTTCTCCACGGTCCTaGGGCAGTCCGGGCACACCCACAGTGGCAGGTGCAGCACGCTGT | + |
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Preference number: 1 (lower is better) Translates to: LAGQGRHASPPSPRS*GSPGTPTVAGAARC Trigger: ACAGCGTGCTGCACCTGCCACTGTGGGTGTGCCCGGACTGCCGCAGGACCGTGGAGAAGGAGGAGAGGCATGGCGGCCTTGACCAGCCAG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000508235.1 |
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| 3UTR CCA 90 bp | CTCCTCCTTCTCCACGGTCCTGCGGCAGTCCGGGCACACCCACAGTaGCAGGTGCAGCACGCTGTTGCCCTTGGGAGCCATGGAAAGGGC | + |
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Preference number: 1 (lower is better) Translates to: LLLLHGPAAVRAHPQ*QVQHAVALGSHGKG Trigger: GCCCTTTCCATGGCTCCCAAGGGCAACAGCGTGCTGCACCTGCCACTGTGGGTGTGCCCGGACTGCCGCAGGACCGTGGAGAAGGAGGAG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000508235.1 |
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| 3UTR GCA 90 bp | TTCTCCACGGTCCTGCGGCAGTCCGGGCACACCCACAGTGGCAGGTaGAGCACGCTGTTGCCCTTGGGAGCCATGGAAAGGGCCAATTTG | + |
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Preference number: 1 (lower is better) Translates to: FSTVLRQSGHTHSGR*STLLPLGAMERANL Trigger: CAAATTGGCCCTTTCCATGGCTCCCAAGGGCAACAGCGTGCTGCACCTGCCACTGTGGGTGTGCCCGGACTGCCGCAGGACCGTGGAGAA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000508235.1 |
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| 3UTR GCA 90 bp | AGCAGGCACAAGGGGGACTGGCTGTGTGGGTCTGACCACAGCATCTaGGAAGGCATCTTCCTGCTTGGAGCGCTCCAAGCCCTTGGGGAT | + |
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Preference number: 1 (lower is better) Translates to: SRHKGDWLCGSDHSI*EGIFLLGALQALGD Trigger: ATCCCCAAGGGCTTGGAGCGCTCCAAGCAGGAAGATGCCTTCGCAGATGCTGTGGTCAGACCCACACAGCCAGTCCCCCTTGTGCCTGCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000509258.5 |
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| 3UTR GCA 90 bp | ACTGGCTGTGTGGGTCTGACCACAGCATCTGCGAAGGCATCTTCCTaGTTGGAGCGCTCCAAGCCCTTGGGGATGGTCTGGCAAGACCTG | + |
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Preference number: 1 (lower is better) Translates to: TGCVGLTTASAKASS*LERSKPLGMVWQDL Trigger: CAGGTCTTGCCAGACCATCCCCAAGGGCTTGGAGCGCTCCAAGCAGGAAGATGCCTTCGCAGATGCTGTGGTCAGACCCACACAGCCAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000509258.5 |
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| 3UTR TCA 90 bp | GTGAAGTTTCTTCAGCAGGCACAAGGGGGACTGGCTGTGTGGGTCTaGCCACAGCATCTGCGAAGGCATCTTCCTGCTTGGAGCGCTCCA | + |
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Preference number: 1 (lower is better) Translates to: VKFLQQAQGGLAVWV*PQHLRRHLPAWSAP Trigger: TGGAGCGCTCCAAGCAGGAAGATGCCTTCGCAGATGCTGTGGTCAGACCCACACAGCCAGTCCCCCTTGTGCCTGCTGAAGAAACTTCAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000509258.5 |
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| 3UTR GCA 90 bp | CCTTCTCCAAAATCTGGTAGGCCACAAGAAAGGACTATAGCTCAGTaGTCAATGATAGTGGTGAAGTTTCTTCAGCAGGCACAAGGGGGA | + |
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Preference number: 1 (lower is better) Translates to: PSPKSGRPQERTIAQ*SMIVVKFLQQAQGG Trigger: TCCCCCTTGTGCCTGCTGAAGAAACTTCACCACTATCATTGAGCACTGAGCTATAGTCCTTTCTTGTGGCCTACCAGATTTTGGAGAAGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000509258.5 |
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| 3UTR CAA 90 bp | CTGCGGCAGTCCGGGCACACCCACAGTGGCAGGTGCAGCACGCTGTaGCCCTTGGGAGCCATGGAAAGGGCCAATTTGCTCGCAGTCTTA | + |
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Preference number: 2 (lower is better) Translates to: LRQSGHTHSGRCSTL*PLGAMERANLLAVL Trigger: TAAGACTGCGAGCAAATTGGCCCTTTCCATGGCTCCCAAGGGCAACAGCGTGCTGCACCTGCCACTGTGGGTGTGCCCGGACTGCCGCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000508235.1 |
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| 3UTR CAA 90 bp | GGCTGTGTGGGTCTGACCACAGCATCTGCGAAGGCATCTTCCTGCTaGGAGCGCTCCAAGCCCTTGGGGATGGTCTGGCAAGACCTGCAG | + |
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Preference number: 2 (lower is better) Translates to: GCVGLTTASAKASSC*ERSKPLGMVWQDLQ Trigger: CTGCAGGTCTTGCCAGACCATCCCCAAGGGCTTGGAGCGCTCCAAGCAGGAAGATGCCTTCGCAGATGCTGTGGTCAGACCCACACAGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000509258.5 |
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| 3UTR CAA 90 bp | CAGTCCGGGCACACCCACAGTGGCAGGTGCAGCACGCTGTTGCCCTaGGGAGCCATGGAAAGGGCCAATTTGCTCGCAGTCTTAATTCCA | + |
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Preference number: 2 (lower is better) Translates to: QSGHTHSGRCSTLLP*GAMERANLLAVLIP Trigger: TGGAATTAAGACTGCGAGCAAATTGGCCCTTTCCATGGCTCCCAAGGGCAACAGCGTGCTGCACCTGCCACTGTGGGTGTGCCCGGACTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000508235.1 |
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| 3UTR-3UTR CCA 90 bp | GAAGGTTCTGCCCAGCTCTGGAGGCCACTATCTTATCTTCCCAGGAGAAACCCCCCAAGCCCTTGGGGATaGTCTGGCAAGACCTGCAGC | + |
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Preference number: 2 (lower is better) Translates to: EGSAQLWRPLSYLPRRNPPSPWG*SGKTCS Trigger: GCTGCAGGTCTTGCCAGACCATCCCCAAGGGCTTGG...GGGGTTTCTCCTGGGAAGATAAGATAGTGGCCTCCAGAGCTGGGCAGAACCTTC 58% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000509258.5 |
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| 3UTR-3UTR GCA 90 bp | GTGAGCTACCAGCCTTCTCCAAAATCTGGTAGGCCACAAGAAAGGACTATAGCTGCGAAGGCATCTTCCTaGTTGGAGCGCTCCAAGCCC | + |
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Preference number: 2 (lower is better) Translates to: VSYQPSPKSGRPQERTIAAKASS*LERSKP Trigger: GGGCTTGGAGCGCTCCAAGCAGGAAGATGCCTTCGC...AGCTATAGTCCTTTCTTGTGGCCTACCAGATTTTGGAGAAGGCTGGTAGCTCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000509258.5 |
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| 3UTR-3UTR GCA 90 bp | AAGGTTCTGCCCAGCTCTGGAGGCCACTATCTTATCTTCCCAGGAGAAACCCCCTCTGACCACAGCATCTaGGAAGGCATCTTCCTGCTT | + |
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Preference number: 2 (lower is better) Translates to: KVLPSSGGHYLIFPGETPSDHSI*EGIFLL Trigger: AAGCAGGAAGATGCCTTCGCAGATGCTGTGGTCAGA...GGGGGTTTCTCCTGGGAAGATAAGATAGTGGCCTCCAGAGCTGGGCAGAACCTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000509258.5 |
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| 3UTR-3UTR CCA 90 bp | AGGCCACAAGAAAGGACTATAGCTCAGTGCTCAATGATAGTGGTGAAGTTTCTTCCCTTGGGGATGGTCTaGCAAGACCTGCAGCACCGC | + |
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Preference number: 2 (lower is better) Translates to: RPQERTIAQCSMIVVKFLPLGMV*QDLQHR Trigger: GCGGTGCTGCAGGTCTTGCCAGACCATCCCCAAGGG...AAGAAACTTCACCACTATCATTGAGCACTGAGCTATAGTCCTTTCTTGTGGCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000509258.5 |
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| 3UTR-3UTR CCA 90 bp | AAATCTGGTAGGCCACAAGAAAGGACTATAGCTCAGTGCTCAATGATAGTGGTGAGGCACAAGGGGGACTaGCTGTGTGGGTCTGACCAC | + |
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Preference number: 2 (lower is better) Translates to: KSGRPQERTIAQCSMIVVRHKGD*LCGSDH Trigger: GTGGTCAGACCCACACAGCCAGTCCCCCTTGTGCCT...CACCACTATCATTGAGCACTGAGCTATAGTCCTTTCTTGTGGCCTACCAGATTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000509258.5 |
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| 3UTR CAA 90 bp | AGGTGCAGCACGCTGTTGCCCTTGGGAGCCATGGAAAGGGCCAATTaGCTCGCAGTCTTAATTCCACTCTCTAAGAATGATGAGTCTTTC | + |
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Preference number: 2 (lower is better) Translates to: RCSTLLPLGAMERAN*LAVLIPLSKNDESF Trigger: GAAAGACTCATCATTCTTAGAGAGTGGAATTAAGACTGCGAGCAAATTGGCCCTTTCCATGGCTCCCAAGGGCAACAGCGTGCTGCACCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000508235.1 |
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| 3UTR-3UTR GCA 90 bp | AAGGTTCTGCCCAGCTCTGGAGGCCACTATCTTATCTTCCCAGGAGAAACCCCCAGGACTATAGCTCAGTaGTCAATGATAGTGGTGAAG | + |
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Preference number: 2 (lower is better) Translates to: KVLPSSGGHYLIFPGETPRTIAQ*SMIVVK Trigger: CTTCACCACTATCATTGAGCACTGAGCTATAGTCCT...GGGGGTTTCTCCTGGGAAGATAAGATAGTGGCCTCCAGAGCTGGGCAGAACCTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000509258.5 |
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| 3UTR CCA 72 bp | CTCCACGGTCCTGCGGCAGTCCGGGCACACCCACAGTaGCAGGTGCAGCACGCTGTTGCCCTTGGGAGCCAT | + |
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Preference number: 3 (lower is better) Translates to: LHGPAAVRAHPQ*QVQHAVALGSH Trigger: ATGGCTCCCAAGGGCAACAGCGTGCTGCACCTGCCACTGTGGGTGTGCCCGGACTGCCGCAGGACCGTGGAG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000508235.1 |
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| 3UTR GCA 72 bp | CCGGGCACACCCACAGTGGCAGGTGCAGCACGCTGTTaGCCTTGGGAGCCATGGAAAGGGCCAATTTGCTCG | + |
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Preference number: 3 (lower is better) Translates to: PGTPTVAGAARC*PWEPWKGPICS Trigger: CGAGCAAATTGGCCCTTTCCATGGCTCCCAAGGGCAACAGCGTGCTGCACCTGCCACTGTGGGTGTGCCCGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000508235.1 |
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| 3UTR TCA 72 bp | CTTCAGCAGGCACAAGGGGGACTGGCTGTGTGGGTCTaGCCACAGCATCTGCGAAGGCATCTTCCTGCTTGG | + |
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Preference number: 3 (lower is better) Translates to: LQQAQGGLAVWV*PQHLRRHLPAW Trigger: CCAAGCAGGAAGATGCCTTCGCAGATGCTGTGGTCAGACCCACACAGCCAGTCCCCCTTGTGCCTGCTGAAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000509258.5 |
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| 3UTR CCA 72 bp | ACACCCACAGTGGCAGGTGCAGCACGCTGTTGCCCTTaGGAGCCATGGAAAGGGCCAATTTGCTCGCAGTCT | + |
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Preference number: 3 (lower is better) Translates to: TPTVAGAARCCP*EPWKGPICSQS Trigger: AGACTGCGAGCAAATTGGCCCTTTCCATGGCTCCCAAGGGCAACAGCGTGCTGCACCTGCCACTGTGGGTGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000508235.1 |
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| 3UTR-3UTR CAA 90 bp | GAAGGTTCTGCCCAGCTCTGGAGGCCACTATCTTATCTTCCCAGGAGAAACCCCGAGCGCTCCAAGCCCTaGGGGATGGTCTGGCAAGAC | + |
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Preference number: 3 (lower is better) Translates to: EGSAQLWRPLSYLPRRNPERSKP*GMVWQD Trigger: GTCTTGCCAGACCATCCCCAAGGGCTTGGAGCGCTC...GGGGTTTCTCCTGGGAAGATAAGATAGTGGCCTCCAGAGCTGGGCAGAACCTTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000509258.5 |
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| 3UTR-3UTR CAA 90 bp | AAATCTGGTAGGCCACAAGAAAGGACTATAGCTCAGTGCTCAATGATAGTGGTGAAGGCATCTTCCTGCTaGGAGCGCTCCAAGCCCTTG | + |
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Preference number: 3 (lower is better) Translates to: KSGRPQERTIAQCSMIVVKASSC*ERSKPL Trigger: CAAGGGCTTGGAGCGCTCCAAGCAGGAAGATGCCTT...CACCACTATCATTGAGCACTGAGCTATAGTCCTTTCTTGTGGCCTACCAGATTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000509258.5 |
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| 3UTR GCA 72 bp | CACTCTCTAAGAATGATGAGTCTTTCCGTTCACTTCTaGACAGAAGACAATAATCCCCAGCAGGGTAGGGTG | + |
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Preference number: 3 (lower is better) Translates to: HSLRMMSLSVHF*TEDNNPQQGRV Trigger: CACCCTACCCTGCTGGGGATTATTGTCTTCTGTGCAGAAGTGAACGGAAAGACTCATCATTCTTAGAGAGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000508235.1 |
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| 3UTR GCA 72 bp | AAATCTGGTAGGCCACAAGAAAGGACTATAGCTCAGTaGTCAATGATAGTGGTGAAGTTTCTTCAGCAGGCA | + |
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Preference number: 3 (lower is better) Translates to: KSGRPQERTIAQ*SMIVVKFLQQA Trigger: TGCCTGCTGAAGAAACTTCACCACTATCATTGAGCACTGAGCTATAGTCCTTTCTTGTGGCCTACCAGATTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000509258.5 |
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| CDS-3UTR GCA 90 bp | CGGCAGTCCGGGCACACCCACAGTGGCAGGTGCAGCACGCTGTTGCCCTTGGGAGGTGCAGCACGCTGTTaGCCTTGGGAGCCATGGAAA | + |
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Preference number: 4 (lower is better) Translates to: RQSGHTHSGRCSTLLPLGGAARC*PWEPWK Trigger: TTTCCATGGCTCCCAAGGGCAACAGCGTGCTGCACC...TCCCAAGGGCAACAGCGTGCTGCACCTGCCACTGTGGGTGTGCCCGGACTGCCG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000508235.1 |
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| CDS-3UTR GCA 90 bp | TGGAGCGCTCCAAGCCCTTGGGGATGGTCTGGCAAGACCTGCAGCACCGCGGCTGCGAAGGCATCTTCCTaGTTGGAGCGCTCCAAGCCC | + |
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Preference number: 4 (lower is better) Translates to: WSAPSPWGWSGKTCSTAAAKASS*LERSKP Trigger: GGGCTTGGAGCGCTCCAAGCAGGAAGATGCCTTCGC...AGCCGCGGTGCTGCAGGTCTTGCCAGACCATCCCCAAGGGCTTGGAGCGCTCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000509258.5 |
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| CDS-3UTR TCA 90 bp | TCCTGCTTGGAGCGCTCCAAGCCCTTGGGGATGGTCTGGCAAGACCTGCAGCACCTGGCTGTGTGGGTCTaGCCACAGCATCTGCGAAGG | + |
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Preference number: 4 (lower is better) Translates to: SCLERSKPLGMVWQDLQHLAVWV*PQHLRR Trigger: CCTTCGCAGATGCTGTGGTCAGACCCACACAGCCAG...GTGCTGCAGGTCTTGCCAGACCATCCCCAAGGGCTTGGAGCGCTCCAAGCAGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000509258.5 |
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| CDS-3UTR CCA 90 bp | ACCACAGCATCTGCGAAGGCATCTTCCTGCTTGGAGCGCTCCAAGCCCTTGGGGCCCTTGGGGATGGTCTaGCAAGACCTGCAGCACCGC | + |
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Preference number: 4 (lower is better) Translates to: TTASAKASSCLERSKPLGPLGMV*QDLQHR Trigger: GCGGTGCTGCAGGTCTTGCCAGACCATCCCCAAGGG...CCCCAAGGGCTTGGAGCGCTCCAAGCAGGAAGATGCCTTCGCAGATGCTGTGGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000509258.5 |
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| CDS-3UTR TCA 90 bp | TCTCCACGGTCCTGCGGCAGTCCGGGCACACCCACAGTGGCAGGTGCAGCACGCATTCTGCACGATCTCTaGGTATCCGTCCATGCAGAT | + |
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Preference number: 4 (lower is better) Translates to: SPRSCGSPGTPTVAGAARILHDL*VSVHAD Trigger: ATCTGCATGGACGGATACTCAGAGATCGTGCAGAAT...GCGTGCTGCACCTGCCACTGTGGGTGTGCCCGGACTGCCGCAGGACCGTGGAGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000508235.1 |
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| CDS-3UTR GCA 90 bp | TCCTGCTTGGAGCGCTCCAAGCCCTTGGGGATGGTCTGGCAAGACCTGCAGCACGCTCCTCGAGAAAGATaGCGCCGCCTCAACAGCAAC | + |
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Preference number: 4 (lower is better) Translates to: SCLERSKPLGMVWQDLQHAPRER*RRLNSN Trigger: GTTGCTGTTGAGGCGGCGGCATCTTTCTCGAGGAGC...GTGCTGCAGGTCTTGCCAGACCATCCCCAAGGGCTTGGAGCGCTCCAAGCAGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000509258.5 |
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| CDS-3UTR CCA 90 bp | ACCACAGCATCTGCGAAGGCATCTTCCTGCTTGGAGCGCTCCAAGCCCTTGGGGCCAAGCCCTTGGGGATaGTCTGGCAAGACCTGCAGC | + |
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Preference number: 4 (lower is better) Translates to: TTASAKASSCLERSKPLGPSPWG*SGKTCS Trigger: GCTGCAGGTCTTGCCAGACCATCCCCAAGGGCTTGG...CCCCAAGGGCTTGGAGCGCTCCAAGCAGGAAGATGCCTTCGCAGATGCTGTGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000509258.5 |
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| 3UTR CAA 72 bp | CACACCCACAGTGGCAGGTGCAGCACGCTGTTGCCCTaGGGAGCCATGGAAAGGGCCAATTTGCTCGCAGTC | + |
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Preference number: 4 (lower is better) Translates to: HTHSGRCSTLLP*GAMERANLLAV Trigger: GACTGCGAGCAAATTGGCCCTTTCCATGGCTCCCAAGGGCAACAGCGTGCTGCACCTGCCACTGTGGGTGTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000508235.1 |
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| CDS-3UTR CCA 90 bp | AGCATCTGCGAAGGCATCTTCCTGCTTGGAGCGCTCCAAGCCCTTGGGGATGGTAGGCACAAGGGGGACTaGCTGTGTGGGTCTGACCAC | + |
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Preference number: 4 (lower is better) Translates to: SICEGIFLLGALQALGDGRHKGD*LCGSDH Trigger: GTGGTCAGACCCACACAGCCAGTCCCCCTTGTGCCT...ACCATCCCCAAGGGCTTGGAGCGCTCCAAGCAGGAAGATGCCTTCGCAGATGCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000509258.5 |
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| 3UTR CAA 72 bp | GGTCTGACCACAGCATCTGCGAAGGCATCTTCCTGCTaGGAGCGCTCCAAGCCCTTGGGGATGGTCTGGCAA | + |
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Preference number: 4 (lower is better) Translates to: GLTTASAKASSC*ERSKPLGMVWQ Trigger: TTGCCAGACCATCCCCAAGGGCTTGGAGCGCTCCAAGCAGGAAGATGCCTTCGCAGATGCTGTGGTCAGACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000509258.5 |
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| CDS-3UTR GCA 90 bp | GAAGGTTCTGCCCAGCTCTGGAGGCCACTATCTTATCTTCCCAGGAGAAACCCCTGGTCTGGCAAGACCTaGAGCACCGCGGCTCTCACC | + |
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Preference number: 4 (lower is better) Translates to: EGSAQLWRPLSYLPRRNPWSGKT*STAALT Trigger: GGTGAGAGCCGCGGTGCTGCAGGTCTTGCCAGACCA...GGGGTTTCTCCTGGGAAGATAAGATAGTGGCCTCCAGAGCTGGGCAGAACCTTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000509258.5 |
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| CDS-3UTR GCA 90 bp | CGGCAGTCCGGGCACACCCACAGTGGCAGGTGCAGCACGCTGTTGCCCTTGGGACTTTCCGTTCACTTCTaGACAGAAGACAATAATCCC | + |
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Preference number: 4 (lower is better) Translates to: RQSGHTHSGRCSTLLPLGLSVHF*TEDNNP Trigger: GGGATTATTGTCTTCTGTGCAGAAGTGAACGGAAAG...TCCCAAGGGCAACAGCGTGCTGCACCTGCCACTGTGGGTGTGCCCGGACTGCCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000508235.1 |
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| CDS-3UTR GCA 90 bp | GAAGGTTCTGCCCAGCTCTGGAGGCCACTATCTTATCTTCCCAGGAGAAACCCCTCTGACCACAGCATCTaGGAAGGCATCTTCCTGCTT | + |
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Preference number: 4 (lower is better) Translates to: EGSAQLWRPLSYLPRRNPSDHSI*EGIFLL Trigger: AAGCAGGAAGATGCCTTCGCAGATGCTGTGGTCAGA...GGGGTTTCTCCTGGGAAGATAAGATAGTGGCCTCCAGAGCTGGGCAGAACCTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000509258.5 |
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| CDS-3UTR TCA 90 bp | ACTATAGCTCAGTGCTCAATGATAGTGGTGAAGTTTCTTCAGCAGGCACAAGGGCCCCAACCCCTGCTGTaGGCTACCAGCCTTCTCCAA | + |
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Preference number: 4 (lower is better) Translates to: TIAQCSMIVVKFLQQAQGPQPLL*ATSLLQ Trigger: TTGGAGAAGGCTGGTAGCTCACAGCAGGGGTTGGGG...CCCTTGTGCCTGCTGAAGAAACTTCACCACTATCATTGAGCACTGAGCTATAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000509258.5 |
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| CDS-3UTR GCA 90 bp | AAGGTTCTGCCCAGCTCTGGAGGCCACTATCTTATCTTCCCAGGAGAAACCCCCGACAAACTGCTGCCATaGTCAGCTATAACCCAGAAG | + |
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Preference number: 4 (lower is better) Translates to: KVLPSSGGHYLIFPGETPDKLLP*SAITQK Trigger: CTTCTGGGTTATAGCTGAGCATGGCAGCAGTTTGTC...GGGGGTTTCTCCTGGGAAGATAAGATAGTGGCCTCCAGAGCTGGGCAGAACCTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000509258.5 |
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| CDS-3UTR GCA 90 bp | TCTCTAAGAATGATGAGTCTTTCCGTTCACTTCTGCACAGAAGACAATAATCCCACCCACAGTGGCAGGTaGAGCACGCTGTTGCCCTTG | + |
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Preference number: 4 (lower is better) Translates to: SLRMMSLSVHFCTEDNNPTHSGR*STLLPL Trigger: CAAGGGCAACAGCGTGCTGCACCTGCCACTGTGGGT...GGGATTATTGTCTTCTGTGCAGAAGTGAACGGAAAGACTCATCATTCTTAGAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000508235.1 |
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| CDS-3UTR CCA 90 bp | AGGCCACAAGAAAGGACTATAGCTCAGTGCTCAATGATAGTGGTGAAGTTTCTTAGGCATCTTCCTGCTTaGAGCGCTCCAAGCCCTTGG | + |
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Preference number: 4 (lower is better) Translates to: RPQERTIAQCSMIVVKFLRHLPA*SAPSPW Trigger: CCAAGGGCTTGGAGCGCTCCAAGCAGGAAGATGCCT...AAGAAACTTCACCACTATCATTGAGCACTGAGCTATAGTCCTTTCTTGTGGCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000509258.5 |
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| CDS-3UTR TCA 90 bp | TTGCTCGCAGTCTTAATTCCACTCTCTAAGAATGATGAGTCTTTCCGTTCACTTACAACTGACAGTACCTaGGGGCCTGAGGCCTGTAGC | + |
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Preference number: 4 (lower is better) Translates to: LLAVLIPLSKNDESFRSLTTDST*GPEACS Trigger: GCTACAGGCCTCAGGCCCTCAGGTACTGTCAGTTGT...AAGTGAACGGAAAGACTCATCATTCTTAGAGAGTGGAATTAAGACTGCGAGCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000508235.1 |
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| CDS-3UTR GCA 90 bp | ACTATAGCTCAGTGCTCAATGATAGTGGTGAAGTTTCTTCAGCAGGCACAAGGGTATTTTCAAGTCCGCTaGTTTCCCGCAAAGCTCGGC | + |
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Preference number: 4 (lower is better) Translates to: TIAQCSMIVVKFLQQAQGYFQVR*FPAKLG Trigger: GCCGAGCTTTGCGGGAAAGCAGCGGACTTGAAAATA...CCCTTGTGCCTGCTGAAGAAACTTCACCACTATCATTGAGCACTGAGCTATAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000509258.5 |
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| CDS-3UTR CCA 90 bp | AGGCCACAAGAAAGGACTATAGCTCAGTGCTCAATGATAGTGGTGAAGTTTCTTGGTTCTGCCCAGCTCTaGAGGCCACTATCTTATCTT | + |
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Preference number: 4 (lower is better) Translates to: RPQERTIAQCSMIVVKFLGSAQL*RPLSYL Trigger: AAGATAAGATAGTGGCCTCCAGAGCTGGGCAGAACC...AAGAAACTTCACCACTATCATTGAGCACTGAGCTATAGTCCTTTCTTGTGGCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000509258.5 |
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| CDS-3UTR GCA 90 bp | ACTATAGCTCAGTGCTCAATGATAGTGGTGAAGTTTCTTCAGCAGGCACAAGGGAGGACTATAGCTCAGTaGTCAATGATAGTGGTGAAG | + |
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Preference number: 4 (lower is better) Translates to: TIAQCSMIVVKFLQQAQGRTIAQ*SMIVVK Trigger: CTTCACCACTATCATTGAGCACTGAGCTATAGTCCT...CCCTTGTGCCTGCTGAAGAAACTTCACCACTATCATTGAGCACTGAGCTATAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000509258.5 |
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| CDS CCA 90 bp | AGGGCGCCGCCGGGGCCGCCGCAAGGGCCTTCTTTTCCTCCCACCTaGCGGGCGACGCGGCGGGCTCAGGAGCAGGCCGGCGGGAGGCCC | + |
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Preference number: 5 (lower is better) Translates to: RAPPGPPQGPSFPPT*RATRRAQEQAGGRP Trigger: GGGCCTCCCGCCGGCCTGCTCCTGAGCCCGCCGCGTCGCCCGCCAGGTGGGAGGAAAAGAAGGCCCTTGCGGCGGCCCCGGCGGCGCCCT 80% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000503659.5 |
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| CDS TCA 90 bp | CTGAGGGCGACCCGGGCGACCCGGTCGCCCGTGCCCGGCTGCCACTaGCCGCTCCAACGCCGCCAGGGACGACCCGCCAGCTGCCTCCGG | + |
|
Preference number: 5 (lower is better) Translates to: LRATRATRSPVPGCH*PLQRRQGRPASCLR Trigger: CCGGAGGCAGCTGGCGGGTCGTCCCTGGCGGCGTTGGAGCGGTCAGTGGCAGCCGGGCACGGGCGACCGGGTCGCCCGGGTCGCCCTCAG 79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000504224.5 |
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| CDS GCA 90 bp | GGCGCGCGGTCCGCGGCGCCGACACGTGCAGCAAGGCCGCCTGCCTaGTGCGCTCGGCCGCCCTCTCCGAGATCCTGCGCCGCAGCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: GARSAAPTRAARPPA*CARPPSPRSCAAAA Trigger: AGCAGCTGCGGCGCAGGATCTCGGAGAGGGCGGCCGAGCGCAGCAGGCAGGCGGCCTTGCTGCACGTGTCGGCGCCGCGGACCGCGCGCC 78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000503659.5 |
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| CDS GCA 90 bp | GCGCGGTCCGCGGCGCCGACACGTGCAGCAAGGCCGCCTGCCTGCTaGGCTCGGCCGCCCTCTCCGAGATCCTGCGCCGCAGCTGCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: ARSAAPTRAARPPAC*ARPPSPRSCAAAAA Trigger: TGCAGCAGCTGCGGCGCAGGATCTCGGAGAGGGCGGCCGAGCGCAGCAGGCAGGCGGCCTTGCTGCACGTGTCGGCGCCGCGGACCGCGC 77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000503659.5 |
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| CDS GCA 90 bp | CGGGCTCAGGAGCAGGCCGGCGGGAGGCCCAGGCCAGACCCAGGATaGCACCCGTGTCCAAGCGACGCGGGGGCAAGGAGCTACGCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: RAQEQAGGRPRPDPG*HPCPSDAGARSYAA Trigger: GGCTGCGTAGCTCCTTGCCCCCGCGTCGCTTGGACACGGGTGGCATCCTGGGTCTGGCCTGGGCCTCCCGCCGGCCTGCTCCTGAGCCCG 74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000503659.5 |
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| CDS TCA 90 bp | CGACGCGGGGGCAAGGAGCTACGCAGCCGGAGAGGTTCACCGGAATaGTTTAGGACAGACAGCGAGGCCCAGGGGCCGCGGCGCGCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: RRGGKELRSRRGSPE*FRTDSEAQGPRRAP Trigger: AGGAGCGCGCCGCGGCCCCTGGGCCTCGCTGTCTGTCCTAAATCATTCCGGTGAACCTCTCCGGCTGCGTAGCTCCTTGCCCCCGCGTCG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000503659.5 |
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| CDS TCA 90 bp | GTCGTGAGAATCTTCATACACCTGTCTATAGGCGCGCCAGAGCGGTaGAGGGCCCGAGCGGTGCAGGGCTGGGCCGCAAGCCTCACAGTC | + |
|
Preference number: 5 (lower is better) Translates to: VVRIFIHLSIGAPER*RARAVQGWAASLTV Trigger: GACTGTGAGGCTTGCGGCCCAGCCCTGCACCGCTCGGGCCCTTCACCGCTCTGGCGCGCCTATAGACAGGTGTATGAAGATTCTCACGAC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000506706.5 |
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| CDS-3UTR CAA 90 bp | TGGAGCGCTCCAAGCCCTTGGGGATGGTCTGGCAAGACCTGCAGCACCGCGGCTAAGGCATCTTCCTGCTaGGAGCGCTCCAAGCCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: WSAPSPWGWSGKTCSTAAKASSC*ERSKPL Trigger: CAAGGGCTTGGAGCGCTCCAAGCAGGAAGATGCCTT...AGCCGCGGTGCTGCAGGTCTTGCCAGACCATCCCCAAGGGCTTGGAGCGCTCCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000509258.5 |
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| CDS GCA 90 bp | CCTGCTTGGAGCGCTCCAAGCCCTTGGGGATGGTCTGGCAAGACCTaGAGCACCGCGGCTCTCACCTATGCCAGTTTCCTCTCCAAACCC | + |
|
Preference number: 5 (lower is better) Translates to: PAWSAPSPWGWSGKT*STAALTYASFLSKP Trigger: GGGTTTGGAGAGGAAACTGGCATAGGTGAGAGCCGCGGTGCTGCAGGTCTTGCCAGACCATCCCCAAGGGCTTGGAGCGCTCCAAGCAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000509258.5 |
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| CDS-3UTR CAA 90 bp | ACCACAGCATCTGCGAAGGCATCTTCCTGCTTGGAGCGCTCCAAGCCCTTGGGGGAGCGCTCCAAGCCCTaGGGGATGGTCTGGCAAGAC | + |
|
Preference number: 5 (lower is better) Translates to: TTASAKASSCLERSKPLGERSKP*GMVWQD Trigger: GTCTTGCCAGACCATCCCCAAGGGCTTGGAGCGCTC...CCCCAAGGGCTTGGAGCGCTCCAAGCAGGAAGATGCCTTCGCAGATGCTGTGGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000509258.5 |
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| CDS CCA 90 bp | AAGGCATCTTCCTGCTTGGAGCGCTCCAAGCCCTTGGGGATGGTCTaGCAAGACCTGCAGCACCGCGGCTCTCACCTATGCCAGTTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: KASSCLERSKPLGMV*QDLQHRGSHLCQFP Trigger: AGGAAACTGGCATAGGTGAGAGCCGCGGTGCTGCAGGTCTTGCCAGACCATCCCCAAGGGCTTGGAGCGCTCCAAGCAGGAAGATGCCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000509258.5 |
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| CDS GCA 90 bp | TGGCCAGGTTGGTCCTGCCGCTCCCACCCCGCTTTAGGGAATTTCTaGTCGTTCTTCAGGGCCTACCTCAAAGGTTGCTTCCATTTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: WPGWSCRSHPALGNF*SFFRAYLKGCFHFS Trigger: AGAGAAATGGAAGCAACCTTTGAGGTAGGCCCTGAAGAACGAGCAGAAATTCCCTAAAGCGGGGTGGGAGCGGCAGGACCAACCTGGCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000511600.5 |
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| CDS-3UTR CAA 90 bp | ACCACAGCATCTGCGAAGGCATCTTCCTGCTTGGAGCGCTCCAAGCCCTTGGGGCACCACGACGCTTTCTaGTACTCATTGTGCTCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: TTASAKASSCLERSKPLGHHDAF*YSLCSL Trigger: CAAAGAGCACAATGAGTACAAGAAAGCGTCGTGGTG...CCCCAAGGGCTTGGAGCGCTCCAAGCAGGAAGATGCCTTCGCAGATGCTGTGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000509258.5 |
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| CDS TCA 90 bp | CAGCACCGCGGCTCTCACCTATGCCAGTTTCCTCTCCAAACCCAGTaGAAAAGGAAACGAAACCACTCACCGTCAACAATCACAACAGAG | + |
|
Preference number: 5 (lower is better) Translates to: QHRGSHLCQFPLQTQ*KRKRNHSPSTITTE Trigger: CTCTGTTGTGATTGTTGACGGTGAGTGGTTTCGTTTCCTTTTTCACTGGGTTTGGAGAGGAAACTGGCATAGGTGAGAGCCGCGGTGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000509258.5 |
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| CDS-3UTR CAA 90 bp | GAAAGGGCCAATTTGCTCGCAGTCTTAATTCCACTCTCTAAGAATGATGAGTCTAGCACGCTGTTGCCCTaGGGAGCCATGGAAAGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: ERANLLAVLIPLSKNDESSTLLP*GAMERA Trigger: GGCCCTTTCCATGGCTCCCAAGGGCAACAGCGTGCT...AGACTCATCATTCTTAGAGAGTGGAATTAAGACTGCGAGCAAATTGGCCCTTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000508235.1 |
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| CDS-3UTR CAA 90 bp | TCTCTAAGAATGATGAGTCTTTCCGTTCACTTCTGCACAGAAGACAATAATCCCAGGTGCAGCACGCTGTaGCCCTTGGGAGCCATGGAA | + |
|
Preference number: 5 (lower is better) Translates to: SLRMMSLSVHFCTEDNNPRCSTL*PLGAME Trigger: TTCCATGGCTCCCAAGGGCAACAGCGTGCTGCACCT...GGGATTATTGTCTTCTGTGCAGAAGTGAACGGAAAGACTCATCATTCTTAGAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000508235.1 |
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| CDS TCA 90 bp | AACTGTACTTTACTCCAGGTATCCTGGAAGTCAGTTCAAAGTACCTaGCTTTGGACCTCAAAGAAGGTCCGAAGTTGGCCAGGTTGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: NCTLLQVSWKSVQST*LWTSKKVRSWPGWS Trigger: GGACCAACCTGGCCAACTTCGGACCTTCTTTGAGGTCCAAAGTCAGGTACTTTGAACTGACTTCCAGGATACCTGGAGTAAAGTACAGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000511600.5 |
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| CDS-3UTR CAA 90 bp | ACTATAGCTCAGTGCTCAATGATAGTGGTGAAGTTTCTTCAGCAGGCACAAGGGGGTTACTCATCTGGCTaGCAAAATAATTTGGATCCG | + |
|
Preference number: 5 (lower is better) Translates to: TIAQCSMIVVKFLQQAQGGYSSG*QNNLDP Trigger: CGGATCCAAATTATTTTGCAAGCCAGATGAGTAACC...CCCTTGTGCCTGCTGAAGAAACTTCACCACTATCATTGAGCACTGAGCTATAGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000509258.5 |
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| CDS-3UTR CAA 90 bp | ATGGAAAGGGCCAATTTGCTCGCAGTCTTAATTCCACTCTCTAAGAATGATGAGGTGAAGAAGAAAATCTaGGCTCACTGGCTGGTCAAG | + |
|
Preference number: 5 (lower is better) Translates to: MERANLLAVLIPLSKNDEVKKKI*AHWLVK Trigger: CTTGACCAGCCAGTGAGCCAAGATTTTCTTCTTCAC...CTCATCATTCTTAGAGAGTGGAATTAAGACTGCGAGCAAATTGGCCCTTTCCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000508235.1 |
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| CDS TCA 90 bp | ACATCAGATGGACACAAATGTGGCTCACATACAAGTCAACTGAGGTaGCTGATCTATGTGGAAGGTGTGTATATTACATGGCTTGGTTCA | + |
|
Preference number: 5 (lower is better) Translates to: TSDGHKCGSHTSQLR*LIYVEGVYITWLGS Trigger: TGAACCAAGCCATGTAATATACACACCTTCCACATAGATCAGTCACCTCAGTTGACTTGTATGTGAGCCACATTTGTGTCCATCTGATGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000511600.5 |
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| CDS CCA 90 bp | GTGGGCAGCAAACTCTCAAGTGGTTCTCTAATACAGCAACCTCACTaGAACAAACTCATCTTTCCAAACAAACACTTCAAACAGAACTGT | + |
|
Preference number: 5 (lower is better) Translates to: VGSKLSSGSLIQQPH*NKLIFPNKHFKQNC Trigger: ACAGTTCTGTTTGAAGTGTTTGTTTGGAAAGATGAGTTTGTTCCAGTGAGGTTGCTGTATTAGAGAACCACTTGAGAGTTTGCTGCCCAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000511600.5 |
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| CDS CCA 90 bp | TTATTGAGAAGTGGAGGCAAAGAGAGTGAATGCTGTAACATCAGATaGACACAAATGTGGCTCACATACAAGTCAACTGAGGTGACTGAT | + |
|
Preference number: 5 (lower is better) Translates to: LLRSGGKESECCNIR*TQMWLTYKSTEVTD Trigger: ATCAGTCACCTCAGTTGACTTGTATGTGAGCCACATTTGTGTCCATCTGATGTTACAGCATTCACTCTCTTTGCCTCCACTTCTCAATAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000511600.5 |
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| CDS-3UTR CAA 90 bp | AATTTGCTCGCAGTCTTAATTCCACTCTCTAAGAATGATGAGTCTTTCCGTTCAATGGAAAGGGCCAATTaGCTCGCAGTCTTAATTCCA | + |
|
Preference number: 5 (lower is better) Translates to: NLLAVLIPLSKNDESFRSMERAN*LAVLIP Trigger: TGGAATTAAGACTGCGAGCAAATTGGCCCTTTCCAT...TGAACGGAAAGACTCATCATTCTTAGAGAGTGGAATTAAGACTGCGAGCAAATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000508235.1 |
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| CDS-3UTR CAA 90 bp | ATGGAAAGGGCCAATTTGCTCGCAGTCTTAATTCCACTCTCTAAGAATGATGAGACTAAAAGGAGTCGTTaGTGGTTGATCTTTTTCCTA | + |
|
Preference number: 5 (lower is better) Translates to: MERANLLAVLIPLSKNDETKRSR*WLIFFL Trigger: TAGGAAAAAGATCAACCACAAACGACTCCTTTTAGT...CTCATCATTCTTAGAGAGTGGAATTAAGACTGCGAGCAAATTGGCCCTTTCCAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000508235.1 |
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| CDS TCA 72 bp | ACCCGGGCGACCCGGTCGCCCGTGCCCGGCTGCCACTaGCCGCTCCAACGCCGCCAGGGACGACCCGCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: TRATRSPVPGCH*PLQRRQGRPAS Trigger: GCTGGCGGGTCGTCCCTGGCGGCGTTGGAGCGGTCAGTGGCAGCCGGGCACGGGCGACCGGGTCGCCCGGGT 79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000504224.5 |
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| CDS GCA 72 bp | CGCTCGGCCGCCCTCTCCGAGATCCTGCGCCGCAGCTaGTGCACGCGCTCGTCCTGCGAGGGCGCCGCCGGG | + |
|
Preference number: 6 (lower is better) Translates to: RSAALSEILRRS*CTRSSCEGAAG Trigger: CCCGGCGGCGCCCTCGCAGGACGAGCGCGTGCAGCAGCTGCGGCGCAGGATCTCGGAGAGGGCGGCCGAGCG 79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000503659.5 |
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| CDS CCA 72 bp | CCGGGGCCGCCGCAAGGGCCTTCTTTTCCTCCCACCTaGCGGGCGACGCGGCGGGCTCAGGAGCAGGCCGGC | + |
|
Preference number: 6 (lower is better) Translates to: PGPPQGPSFPPT*RATRRAQEQAG Trigger: GCCGGCCTGCTCCTGAGCCCGCCGCGTCGCCCGCCAGGTGGGAGGAAAAGAAGGCCCTTGCGGCGGCCCCGG 78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000503659.5 |
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| CDS GCA 72 bp | TCCGCGGCGCCGACACGTGCAGCAAGGCCGCCTGCCTaGTGCGCTCGGCCGCCCTCTCCGAGATCCTGCGCC | + |
|
Preference number: 6 (lower is better) Translates to: SAAPTRAARPPA*CARPPSPRSCA Trigger: GGCGCAGGATCTCGGAGAGGGCGGCCGAGCGCAGCAGGCAGGCGGCCTTGCTGCACGTGTCGGCGCCGCGGA 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000503659.5 |
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| CDS GCA 72 bp | CCTGCCTGCTGCGCTCGGCCGCCCTCTCCGAGATCCTaGGCCGCAGCTGCTGCACGCGCTCGTCCTGCGAGG | + |
|
Preference number: 6 (lower is better) Translates to: PACCARPPSPRS*AAAAARARPAR Trigger: CCTCGCAGGACGAGCGCGTGCAGCAGCTGCGGCGCAGGATCTCGGAGAGGGCGGCCGAGCGCAGCAGGCAGG 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000503659.5 |
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| CDS TCA 72 bp | ATCTTCATACACCTGTCTATAGGCGCGCCAGAGCGGTaGAGGGCCCGAGCGGTGCAGGGCTGGGCCGCAAGC | + |
|
Preference number: 6 (lower is better) Translates to: IFIHLSIGAPER*RARAVQGWAAS Trigger: GCTTGCGGCCCAGCCCTGCACCGCTCGGGCCCTTCACCGCTCTGGCGCGCCTATAGACAGGTGTATGAAGAT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000506706.5 |
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| CDS TCA 72 bp | GGCAAGGAGCTACGCAGCCGGAGAGGTTCACCGGAATaGTTTAGGACAGACAGCGAGGCCCAGGGGCCGCGG | + |
|
Preference number: 6 (lower is better) Translates to: GKELRSRRGSPE*FRTDSEAQGPR Trigger: CCGCGGCCCCTGGGCCTCGCTGTCTGTCCTAAATCATTCCGGTGAACCTCTCCGGCTGCGTAGCTCCTTGCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000503659.5 |
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| CDS CCA 72 bp | TCCTGCTTGGAGCGCTCCAAGCCCTTGGGGATGGTCTaGCAAGACCTGCAGCACCGCGGCTCTCACCTATGC | + |
|
Preference number: 6 (lower is better) Translates to: SCLERSKPLGMV*QDLQHRGSHLC Trigger: GCATAGGTGAGAGCCGCGGTGCTGCAGGTCTTGCCAGACCATCCCCAAGGGCTTGGAGCGCTCCAAGCAGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000509258.5 |
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| CDS GCA 72 bp | CTTCTTCAGCCGCCCAGGAGAGCTCCTCGAGAAAGATaGCGCCGCCTCAACAGCAACCCACTTCCGCTTCGG | + |
|
Preference number: 6 (lower is better) Translates to: LLQPPRRAPRER*RRLNSNPLPLR Trigger: CCGAAGCGGAAGTGGGTTGCTGTTGAGGCGGCGGCATCTTTCTCGAGGAGCTCTCCTGGGCGGCTGAAGAAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000502316.5 ENST00000541204.5 |
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| CDS GCA 72 bp | AGCGCTCCAAGCCCTTGGGGATGGTCTGGCAAGACCTaGAGCACCGCGGCTCTCACCTATGCCAGTTTCCTC | + |
|
Preference number: 6 (lower is better) Translates to: SAPSPWGWSGKT*STAALTYASFL Trigger: GAGGAAACTGGCATAGGTGAGAGCCGCGGTGCTGCAGGTCTTGCCAGACCATCCCCAAGGGCTTGGAGCGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000509258.5 |
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| CDS GCA 72 bp | AAACCCTGCCCGGGTCTTCCCCCTAACAGCACATCCTaGCCGACTTTCCAAGTGACCTTGGGGGCGTTCCTG | + |
|
Preference number: 6 (lower is better) Translates to: KPCPGLPPNSTS*PTFQVTLGAFL Trigger: CAGGAACGCCCCCAAGGTCACTTGGAAAGTCGGGCAGGATGTGCTGTTAGGGGGAAGACCCGGGCAGGGTTT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000506706.5 |
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| CDS GCA 72 bp | ACCTCAAAGAAGGTCCGAAGTTGGCCAGGTTGGTCCTaGCGCTCCCACCCCGCTTTAGGGAATTTCTGCTCG | + |
|
Preference number: 6 (lower is better) Translates to: TSKKVRSWPGWS*RSHPALGNFCS Trigger: CGAGCAGAAATTCCCTAAAGCGGGGTGGGAGCGGCAGGACCAACCTGGCCAACTTCGGACCTTCTTTGAGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000511600.5 |
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| CDS CAA 72 bp | CCTAACAGCACATCCTGCCCGACTTTCCAAGTGACCTaGGGGGCGTTCCTGCCCCTCCCAGAGTCTCAGTTT | + |
|
Preference number: 6 (lower is better) Translates to: PNSTSCPTFQVT*GAFLPLPESQF Trigger: AAACTGAGACTCTGGGAGGGGCAGGAACGCCCCCAAGGTCACTTGGAAAGTCGGGCAGGATGTGCTGTTAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000506706.5 |
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| CDS GCA 72 bp | TGGTCCTGCCGCTCCCACCCCGCTTTAGGGAATTTCTaGTCGTTCTTCAGGGCCTACCTCAAAGGTTGCTTC | + |
|
Preference number: 6 (lower is better) Translates to: WSCRSHPALGNF*SFFRAYLKGCF Trigger: GAAGCAACCTTTGAGGTAGGCCCTGAAGAACGAGCAGAAATTCCCTAAAGCGGGGTGGGAGCGGCAGGACCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000511600.5 |
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| CDS CCA 72 bp | CTTTGGACCTCAAAGAAGGTCCGAAGTTGGCCAGGTTaGTCCTGCCGCTCCCACCCCGCTTTAGGGAATTTC | + |
|
Preference number: 6 (lower is better) Translates to: LWTSKKVRSWPG*SCRSHPALGNF Trigger: GAAATTCCCTAAAGCGGGGTGGGAGCGGCAGGACCAACCTGGCCAACTTCGGACCTTCTTTGAGGTCCAAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000511600.5 |
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| CDS CAA 72 bp | AAGTACCTGACTTTGGACCTCAAAGAAGGTCCGAAGTaGGCCAGGTTGGTCCTGCCGCTCCCACCCCGCTTT | + |
|
Preference number: 6 (lower is better) Translates to: KYLTLDLKEGPK*ARLVLPLPPRF Trigger: AAAGCGGGGTGGGAGCGGCAGGACCAACCTGGCCAACTTCGGACCTTCTTTGAGGTCCAAAGTCAGGTACTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000511600.5 |
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| CDS CAA 72 bp | ACTTTGGACCTCAAAGAAGGTCCGAAGTTGGCCAGGTaGGTCCTGCCGCTCCCACCCCGCTTTAGGGAATTT | + |
|
Preference number: 6 (lower is better) Translates to: TLDLKEGPKLAR*VLPLPPRFREF Trigger: AAATTCCCTAAAGCGGGGTGGGAGCGGCAGGACCAACCTGGCCAACTTCGGACCTTCTTTGAGGTCCAAAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000511600.5 |
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| CDS CAA 90 bp | AAGTACCTGACTTTGGACCTCAAAGAAGGTCCGAAGTTGGCCAGGTaGGTCCTGCCGCTCCCACCCCGCTTTAGGGAATTTCTGCTCGTT | + |
|
Preference number: 6 (lower is better) Translates to: KYLTLDLKEGPKLAR*VLPLPPRFREFLLV Trigger: AACGAGCAGAAATTCCCTAAAGCGGGGTGGGAGCGGCAGGACCAACCTGGCCAACTTCGGACCTTCTTTGAGGTCCAAAGTCAGGTACTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000511600.5 |
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| CDS CAA 90 bp | GTCAGTTCAAAGTACCTGACTTTGGACCTCAAAGAAGGTCCGAAGTaGGCCAGGTTGGTCCTGCCGCTCCCACCCCGCTTTAGGGAATTT | + |
|
Preference number: 6 (lower is better) Translates to: VSSKYLTLDLKEGPK*ARLVLPLPPRFREF Trigger: AAATTCCCTAAAGCGGGGTGGGAGCGGCAGGACCAACCTGGCCAACTTCGGACCTTCTTTGAGGTCCAAAGTCAGGTACTTTGAACTGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000511600.5 |
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| CDS CAA 90 bp | TACTTTACTCCAGGTATCCTGGAAGTCAGTTCAAAGTACCTGACTTaGGACCTCAAAGAAGGTCCGAAGTTGGCCAGGTTGGTCCTGCCG | + |
|
Preference number: 6 (lower is better) Translates to: YFTPGILEVSSKYLT*DLKEGPKLARLVLP Trigger: CGGCAGGACCAACCTGGCCAACTTCGGACCTTCTTTGAGGTCCAAAGTCAGGTACTTTGAACTGACTTCCAGGATACCTGGAGTAAAGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000511600.5 |
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| CDS CAA 72 bp | CCAGGTATCCTGGAAGTCAGTTCAAAGTACCTGACTTaGGACCTCAAAGAAGGTCCGAAGTTGGCCAGGTTG | + |
|
Preference number: 6 (lower is better) Translates to: PGILEVSSKYLT*DLKEGPKLARL Trigger: CAACCTGGCCAACTTCGGACCTTCTTTGAGGTCCAAAGTCAGGTACTTTGAACTGACTTCCAGGATACCTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000511600.5 |
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| CDS TCA 72 bp | GGCTCTCACCTATGCCAGTTTCCTCTCCAAACCCAGTaGAAAAGGAAACGAAACCACTCACCGTCAACAATC | + |
|
Preference number: 6 (lower is better) Translates to: GSHLCQFPLQTQ*KRKRNHSPSTI Trigger: GATTGTTGACGGTGAGTGGTTTCGTTTCCTTTTTCACTGGGTTTGGAGAGGAAACTGGCATAGGTGAGAGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000509258.5 |
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| CDS CAA 72 bp | GAATTTCTGCTCGTTCTTCAGGGCCTACCTCAAAGGTaGCTTCCATTTCTCTCACTCCTCCTAGTCCTGACT | + |
|
Preference number: 6 (lower is better) Translates to: EFLLVLQGLPQR*LPFLSLLLVLT Trigger: AGTCAGGACTAGGAGGAGTGAGAGAAATGGAAGCAACCTTTGAGGTAGGCCCTGAAGAACGAGCAGAAATTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000511600.5 |
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| CDS CAA 90 bp | TGCTCTGTGGAAGCGGGCCTCAGTCAGTTTACAGATTGTGAGTTATaGAGAAGTGGAGGCAAAGAGAGTGAATGCTGTAACATCAGATGG | + |
|
Preference number: 6 (lower is better) Translates to: CSVEAGLSQFTDCEL*RSGGKESECCNIRW Trigger: CCATCTGATGTTACAGCATTCACTCTCTTTGCCTCCACTTCTCAATAACTCACAATCTGTAAACTGACTGAGGCCCGCTTCCACAGAGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000511600.5 |
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| CDS TCA 72 bp | TTACTCCAGGTATCCTGGAAGTCAGTTCAAAGTACCTaGCTTTGGACCTCAAAGAAGGTCCGAAGTTGGCCA | + |
|
Preference number: 6 (lower is better) Translates to: LLQVSWKSVQST*LWTSKKVRSWP Trigger: TGGCCAACTTCGGACCTTCTTTGAGGTCCAAAGTCAGGTACTTTGAACTGACTTCCAGGATACCTGGAGTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000511600.5 |
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| CDS CAA 72 bp | GAAGCGGGCCTCAGTCAGTTTACAGATTGTGAGTTATaGAGAAGTGGAGGCAAAGAGAGTGAATGCTGTAAC | + |
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Preference number: 6 (lower is better) Translates to: EAGLSQFTDCEL*RSGGKESECCN Trigger: GTTACAGCATTCACTCTCTTTGCCTCCACTTCTCAATAACTCACAATCTGTAAACTGACTGAGGCCCGCTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000511600.5 |
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| CDS CCA 72 bp | AGTGGAGGCAAAGAGAGTGAATGCTGTAACATCAGATaGACACAAATGTGGCTCACATACAAGTCAACTGAG | + |
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Preference number: 6 (lower is better) Translates to: SGGKESECCNIR*TQMWLTYKSTE Trigger: CTCAGTTGACTTGTATGTGAGCCACATTTGTGTCCATCTGATGTTACAGCATTCACTCTCTTTGCCTCCACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000511600.5 |
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| CDS TCA 72 bp | CTCAACTTTTTGCGTTCACCTAATATTTCTCACAGATaGCACTGTGGGCAGCAAACTCTCAAGTGGTTCTCT | + |
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Preference number: 6 (lower is better) Translates to: LNFLRSPNISHR*HCGQQTLKWFS Trigger: AGAGAACCACTTGAGAGTTTGCTGCCCACAGTGTCATCTGTGAGAAATATTAGGTGAACGCAAAAAGTTGAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000511600.5 |
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| CDS TCA 72 bp | GGACACAAATGTGGCTCACATACAAGTCAACTGAGGTaGCTGATCTATGTGGAAGGTGTGTATATTACATGG | + |
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Preference number: 6 (lower is better) Translates to: GHKCGSHTSQLR*LIYVEGVYITW Trigger: CCATGTAATATACACACCTTCCACATAGATCAGTCACCTCAGTTGACTTGTATGTGAGCCACATTTGTGTCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000511600.5 |
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| CDS TCA 72 bp | AGTATTTCTATGACACTGACAACTGTTGTGAAGGTCTaGGATTACCAAACCCTAAGCTATTCCTTCTCAGCC | + |
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Preference number: 6 (lower is better) Translates to: SISMTLTTVVKV*DYQTLSYSFSA Trigger: GGCTGAGAAGGAATAGCTTAGGGTTTGGTAATCTCAGACCTTCACAACAGTTGTCAGTGTCATAGAAATACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000504782.5 |
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| CDS GCA 72 bp | ATATTACATGGCTTGGTTCAGCTGGCCTCAACTTTTTaGGTTCACCTAATATTTCTCACAGATGACACTGTG | + |
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Preference number: 6 (lower is better) Translates to: ILHGLVQLASTF*VHLIFLTDDTV Trigger: CACAGTGTCATCTGTGAGAAATATTAGGTGAACGCAAAAAGTTGAGGCCAGCTGAACCAAGCCATGTAATAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000511600.5 |
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| CDS CCA 72 bp | CCACCAGAAAGCTCCTATACATACTCCTTCAAGAAGTaGGGTTACTTAGAAGTGACATTATGGAACTCACTT | + |
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Preference number: 6 (lower is better) Translates to: PPESSYTYSFKK*GYLEVTLWNSL Trigger: AAGTGAGTTCCATAATGTCACTTCTAAGTAACCCCACTTCTTGAAGGAGTATGTATAGGAGCTTTCTGGTGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000504782.5 |
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| CDS CCA 72 bp | AAACTCTCAAGTGGTTCTCTAATACAGCAACCTCACTaGAACAAACTCATCTTTCCAAACAAACACTTCAAA | + |
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Preference number: 6 (lower is better) Translates to: KLSSGSLIQQPH*NKLIFPNKHFK Trigger: TTTGAAGTGTTTGTTTGGAAAGATGAGTTTGTTCCAGTGAGGTTGCTGTATTAGAGAACCACTTGAGAGTTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000511600.5 |
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