Pregenerated sensors for RNF25 (Homo sapiens)
Ensembl gene IDs: ENSG00000163481Ensembl transcript IDs: ENST00000295704.7, ENST00000423170.1, ENST00000463188.5, ENST00000473034.5, ENST00000474339.1, ENST00000497832.1
Found 82 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | ATCATACACGAGGGGCTCTCTGCACACTGGACACTGCACACCGACTaGCTTCTGTTTGGTTGTAGCATGCTGCCGTTCCTGTTCCTGCTC | + |
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Preference number: 1 (lower is better) Translates to: IIHEGLSAHWTLHTD*LLFGCSMLPFLFLL Trigger: GAGCAGGAACAGGAACGGCAGCATGCTACAACCAAACAGAAGGCAGTCGGTGTGCAGTGTCCAGTGTGCAGAGAGCCCCTCGTGTATGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000423170.1 |
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| 3UTR GCA 90 bp | AGTGAGGCAAGATCATACACGAGGGGCTCTCTGCACACTGGACACTaGACACCGACTGCCTTCTGTTTGGTTGTAGCATGCTGCCGTTCC | + |
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Preference number: 1 (lower is better) Translates to: SEARSYTRGSLHTGH*TPTAFCLVVACCRS Trigger: GGAACGGCAGCATGCTACAACCAAACAGAAGGCAGTCGGTGTGCAGTGTCCAGTGTGCAGAGAGCCCCTCGTGTATGATCTTGCCTCACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000423170.1 |
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| 3UTR CAA 90 bp | AGGGGCTCTCTGCACACTGGACACTGCACACCGACTGCCTTCTGTTaGGTTGTAGCATGCTGCCGTTCCTGTTCCTGCTCCTGTCCTTGT | + |
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Preference number: 2 (lower is better) Translates to: RGSLHTGHCTPTAFC*VVACCRSCSCSCPC Trigger: ACAAGGACAGGAGCAGGAACAGGAACGGCAGCATGCTACAACCAAACAGAAGGCAGTCGGTGTGCAGTGTCCAGTGTGCAGAGAGCCCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000423170.1 |
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| 3UTR GCA 72 bp | CACTGCACACCGACTGCCTTCTGTTTGGTTGTAGCATaGTGCCGTTCCTGTTCCTGCTCCTGTCCTTGTGCC | + |
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Preference number: 3 (lower is better) Translates to: HCTPTAFCLVVA*CRSCSCSCPCA Trigger: GGCACAAGGACAGGAGCAGGAACAGGAACGGCAGCATGCTACAACCAAACAGAAGGCAGTCGGTGTGCAGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000423170.1 |
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| 3UTR GCA 72 bp | AGATCATACACGAGGGGCTCTCTGCACACTGGACACTaGACACCGACTGCCTTCTGTTTGGTTGTAGCATGC | + |
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Preference number: 3 (lower is better) Translates to: RSYTRGSLHTGH*TPTAFCLVVAC Trigger: GCATGCTACAACCAAACAGAAGGCAGTCGGTGTGCAGTGTCCAGTGTGCAGAGAGCCCCTCGTGTATGATCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000423170.1 |
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| 3UTR GCA 72 bp | CTTTCAGTGAGGCAAGATCATACACGAGGGGCTCTCTaGACACTGGACACTGCACACCGACTGCCTTCTGTT | + |
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Preference number: 3 (lower is better) Translates to: LSVRQDHTRGAL*TLDTAHRLPSV Trigger: AACAGAAGGCAGTCGGTGTGCAGTGTCCAGTGTGCAGAGAGCCCCTCGTGTATGATCTTGCCTCACTGAAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000423170.1 |
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| CDS-3UTR GCA 90 bp | GAGGCAAGATCATACACGAGGGGCTCTCTGCACACTGGACACTGCACACCGACTCCAGTCCTCCTCCCCTaGAGCTGCAGACGCAGACGC | + |
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Preference number: 4 (lower is better) Translates to: EARSYTRGSLHTGHCTPTPVLLP*SCRRRR Trigger: GCGTCTGCGTCTGCAGCTGCAGGGGAGGAGGACTGG...AGTCGGTGTGCAGTGTCCAGTGTGCAGAGAGCCCCTCGTGTATGATCTTGCCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000423170.1 |
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| CDS-3UTR GCA 90 bp | ACGAGGGGCTCTCTGCACACTGGACACTGCACACCGACTGCCTTCTGTTTGGTTCATACAGCATGGCAGTaGCCAGCCCAGCCTTGGCCA | + |
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Preference number: 4 (lower is better) Translates to: TRGSLHTGHCTPTAFCLVHTAWQ*PAQPWP Trigger: TGGCCAAGGCTGGGCTGGGCACTGCCATGCTGTATG...AACCAAACAGAAGGCAGTCGGTGTGCAGTGTCCAGTGTGCAGAGAGCCCCTCGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000423170.1 |
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| CDS-3UTR CCA 90 bp | CTGCACACCGACTGCCTTCTGTTTGGTTGTAGCATGCTGCCGTTCCTGTTCCTGGGGCTCTCTGCACACTaGACACTGCACACCGACTGC | + |
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Preference number: 4 (lower is better) Translates to: LHTDCLLFGCSMLPFLFLGLSAH*TLHTDC Trigger: GCAGTCGGTGTGCAGTGTCCAGTGTGCAGAGAGCCC...CAGGAACAGGAACGGCAGCATGCTACAACCAAACAGAAGGCAGTCGGTGTGCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000423170.1 |
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| CDS-3UTR GCA 90 bp | AGGCAAGATCATACACGAGGGGCTCTCTGCACACTGGACACTGCACACCGACTGCTGCACACTGGACACTaGACACCGACTGCCTTCTGT | + |
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Preference number: 4 (lower is better) Translates to: RQDHTRGALCTLDTAHRLLHTGH*TPTAFC Trigger: ACAGAAGGCAGTCGGTGTGCAGTGTCCAGTGTGCAG...CAGTCGGTGTGCAGTGTCCAGTGTGCAGAGAGCCCCTCGTGTATGATCTTGCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000423170.1 |
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| 3UTR CAA 72 bp | CTGCACACTGGACACTGCACACCGACTGCCTTCTGTTaGGTTGTAGCATGCTGCCGTTCCTGTTCCTGCTCC | + |
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Preference number: 4 (lower is better) Translates to: LHTGHCTPTAFC*VVACCRSCSCS Trigger: GGAGCAGGAACAGGAACGGCAGCATGCTACAACCAAACAGAAGGCAGTCGGTGTGCAGTGTCCAGTGTGCAG 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000423170.1 |
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| CDS-3UTR GCA 90 bp | TCTGCACACTGGACACTGCACACCGACTGCCTTCTGTTTGGTTGTAGCATGCTGACACGAGGGGCTCTCTaGACACTGGACACTGCACAC | + |
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Preference number: 4 (lower is better) Translates to: SAHWTLHTDCLLFGCSMLTRGAL*TLDTAH Trigger: GTGTGCAGTGTCCAGTGTGCAGAGAGCCCCTCGTGT...CAGCATGCTACAACCAAACAGAAGGCAGTCGGTGTGCAGTGTCCAGTGTGCAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000423170.1 |
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| CDS-3UTR CCA 90 bp | CATACACGAGGGGCTCTCTGCACACTGGACACTGCACACCGACTGCCTTCTGTTTCTTGCTCCATGTGCTaGATGTACCGAGCAAGGCAG | + |
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Preference number: 4 (lower is better) Translates to: HTRGALCTLDTAHRLPSVSCSMC*MYRARQ Trigger: CTGCCTTGCTCGGTACATCCAGCACATGGAGCAAGA...AACAGAAGGCAGTCGGTGTGCAGTGTCCAGTGTGCAGAGAGCCCCTCGTGTATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000423170.1 |
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| CDS-3UTR TCA 90 bp | AGTGAGGCAAGATCATACACGAGGGGCTCTCTGCACACTGGACACTGCACACCGGTGGATCTGTTCATCTaGAAGTCCTCGGGGATTTCG | + |
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Preference number: 4 (lower is better) Translates to: SEARSYTRGSLHTGHCTPVDLFI*KSSGIS Trigger: CGAAATCCCCGAGGACTTTCAGATGAACAGATCCAC...CGGTGTGCAGTGTCCAGTGTGCAGAGAGCCCCTCGTGTATGATCTTGCCTCACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000423170.1 |
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| CDS-3UTR TCA 90 bp | ATGGGCTGTTGGGGTTCAGGGGCTGCTTTCAGTGAGGCAAGATCATACACGAGGAACCATAGAGGCAGATaGCACACTGGCCATGAGGGA | + |
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Preference number: 4 (lower is better) Translates to: MGCWGSGAAFSEARSYTRNHRGR*HTGHEG Trigger: TCCCTCATGGCCAGTGTGTCATCTGCCTCTATGGTT...CCTCGTGTATGATCTTGCCTCACTGAAAGCAGCCCCTGAACCCCAACAGCCCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000423170.1 |
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| CDS-3UTR TCA 90 bp | ATACACGAGGGGCTCTCTGCACACTGGACACTGCACACCGACTGCCTTCTGTTTCCTCATGGGGATATGTaGATCCTGGTCCTCTGCAGT | + |
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Preference number: 4 (lower is better) Translates to: IHEGLSAHWTLHTDCLLFPHGDM*ILVLCS Trigger: ACTGCAGAGGACCAGGATTCACATATCCCCATGAGG...AAACAGAAGGCAGTCGGTGTGCAGTGTCCAGTGTGCAGAGAGCCCCTCGTGTAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000423170.1 |
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| CDS-3UTR GCA 90 bp | CTGCACACCGACTGCCTTCTGTTTGGTTGTAGCATGCTGCCGTTCCTGTTCCTGAGCTCTTGCTCCATGTaGTGGATGTACCGAGCAAGG | + |
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Preference number: 4 (lower is better) Translates to: LHTDCLLFGCSMLPFLFLSSCSM*WMYRAR Trigger: CCTTGCTCGGTACATCCAGCACATGGAGCAAGAGCT...CAGGAACAGGAACGGCAGCATGCTACAACCAAACAGAAGGCAGTCGGTGTGCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000423170.1 |
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| CDS-3UTR GCA 90 bp | TCATACACGAGGGGCTCTCTGCACACTGGACACTGCACACCGACTGCCTTCTGTTGTGCCTTCAGCTCTTaGTCCATGTGCTGGATGTAC | + |
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Preference number: 4 (lower is better) Translates to: SYTRGSLHTGHCTPTAFCCAFSS*SMCWMY Trigger: GTACATCCAGCACATGGAGCAAGAGCTGAAGGCACA...ACAGAAGGCAGTCGGTGTGCAGTGTCCAGTGTGCAGAGAGCCCCTCGTGTATGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000423170.1 |
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| CDS-3UTR GCA 90 bp | TTCTGTTTGGTTGTAGCATGCTGCCGTTCCTGTTCCTGCTCCTGTCCTTGTGCCTGCCGTTCCTGTTCCTaGTCCTGTCCTTGTGCCTTC | + |
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Preference number: 4 (lower is better) Translates to: FCLVVACCRSCSCSCPCACRSCS*SCPCAF Trigger: GAAGGCACAAGGACAGGAGCAGGAACAGGAACGGCA...GGCACAAGGACAGGAGCAGGAACAGGAACGGCAGCATGCTACAACCAAACAGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000423170.1 |
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| CDS-3UTR GCA 90 bp | TCATACACGAGGGGCTCTCTGCACACTGGACACTGCACACCGACTGCCTTCTGTACACTGCACACCGACTaGCTTCTGTTTGGTTGTAGC | + |
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Preference number: 4 (lower is better) Translates to: SYTRGSLHTGHCTPTAFCTLHTD*LLFGCS Trigger: GCTACAACCAAACAGAAGGCAGTCGGTGTGCAGTGT...ACAGAAGGCAGTCGGTGTGCAGTGTCCAGTGTGCAGAGAGCCCCTCGTGTATGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000423170.1 |
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| CDS-3UTR CCA 90 bp | GACTGCCTTCTGTTTGGTTGTAGCATGCTGCCGTTCCTGTTCCTGCTCCTGTCCGGGATATGTGAATCCTaGTCCTCTGCAGTGGCAGGA | + |
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Preference number: 4 (lower is better) Translates to: DCLLFGCSMLPFLFLLLSGICES*SSAVAG Trigger: TCCTGCCACTGCAGAGGACCAGGATTCACATATCCC...GGACAGGAGCAGGAACAGGAACGGCAGCATGCTACAACCAAACAGAAGGCAGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000423170.1 |
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| CDS-3UTR TCA 90 bp | CACGAGGGGCTCTCTGCACACTGGACACTGCACACCGACTGCCTTCTGTTTGGTGTAGATCTCCCATGGTaGAGTTCTGCCATTTCCTTT | + |
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Preference number: 4 (lower is better) Translates to: HEGLSAHWTLHTDCLLFGVDLPW*SSAISF Trigger: AAAGGAAATGGCAGAACTTCACCATGGGAGATCTAC...ACCAAACAGAAGGCAGTCGGTGTGCAGTGTCCAGTGTGCAGAGAGCCCCTCGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000423170.1 |
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| CDS-3UTR TCA 90 bp | GAGGCAAGATCATACACGAGGGGCTCTCTGCACACTGGACACTGCACACCGACTCCTTCCCTTTCTCAATaGGTTCATACAGCATGGCAG | + |
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Preference number: 4 (lower is better) Translates to: EARSYTRGSLHTGHCTPTPSLSQ*VHTAWQ Trigger: CTGCCATGCTGTATGAACTCATTGAGAAAGGGAAGG...AGTCGGTGTGCAGTGTCCAGTGTGCAGAGAGCCCCTCGTGTATGATCTTGCCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000423170.1 |
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| CDS-3UTR TCA 90 bp | AGTGAGGCAAGATCATACACGAGGGGCTCTCTGCACACTGGACACTGCACACCGATGACACACTGGCCATaGGGGATGTTGTTATCTGTG | + |
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Preference number: 4 (lower is better) Translates to: SEARSYTRGSLHTGHCTPMTHWP*GMLLSV Trigger: CACAGATAACAACATCCCTCATGGCCAGTGTGTCAT...CGGTGTGCAGTGTCCAGTGTGCAGAGAGCCCCTCGTGTATGATCTTGCCTCACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000423170.1 |
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| CDS-3UTR TCA 90 bp | GCCTTCTGTTTGGTTGTAGCATGCTGCCGTTCCTGTTCCTGCTCCTGTCCTTGTAGGGGCTGCTTTCAGTaGGGCAAGATCATACACGAG | + |
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Preference number: 4 (lower is better) Translates to: AFCLVVACCRSCSCSCPCRGCFQ*GKIIHE Trigger: CTCGTGTATGATCTTGCCTCACTGAAAGCAGCCCCT...ACAAGGACAGGAGCAGGAACAGGAACGGCAGCATGCTACAACCAAACAGAAGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000423170.1 |
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| CDS-3UTR GCA 90 bp | ACTGCCTTCTGTTTGGTTGTAGCATGCTGCCGTTCCTGTTCCTGCTCCTGTCCTCTGCTCCTGTCCTTGTaGCTTCAGCTCTTGCTCCAT | + |
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Preference number: 4 (lower is better) Translates to: TAFCLVVACCRSCSCSCPLLLSL*LQLLLH Trigger: ATGGAGCAAGAGCTGAAGGCACAAGGACAGGAGCAG...AGGACAGGAGCAGGAACAGGAACGGCAGCATGCTACAACCAAACAGAAGGCAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000423170.1 |
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| CDS-3UTR CCA 90 bp | AGTGAGGCAAGATCATACACGAGGGGCTCTCTGCACACTGGACACTGCACACCGTCGGATAGAGATCTGTaGCACCTCATGGGGATATGT | + |
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Preference number: 4 (lower is better) Translates to: SEARSYTRGSLHTGHCTPSDRDL*HLMGIC Trigger: ACATATCCCCATGAGGTGCCACAGATCTCTATCCGA...CGGTGTGCAGTGTCCAGTGTGCAGAGAGCCCCTCGTGTATGATCTTGCCTCACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000423170.1 |
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| CDS-3UTR TCA 90 bp | TTCAGTGAGGCAAGATCATACACGAGGGGCTCTCTGCACACTGGACACTGCACATGGCAGGATGCAAAGTaGTGTAGATCTCCCATGGTG | + |
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Preference number: 4 (lower is better) Translates to: FSEARSYTRGSLHTGHCTWQDAK*CRSPMV Trigger: CACCATGGGAGATCTACATCACTTTGCATCCTGCCA...TGTGCAGTGTCCAGTGTGCAGAGAGCCCCTCGTGTATGATCTTGCCTCACTGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000423170.1 |
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| CDS-3UTR CCA 90 bp | GGCTCTCTGCACACTGGACACTGCACACCGACTGCCTTCTGTTTGGTTGTAGCAATCTGTGGCACCTCATaGGGATATGTGAATCCTGGT | + |
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Preference number: 4 (lower is better) Translates to: GSLHTGHCTPTAFCLVVAICGTS*GYVNPG Trigger: ACCAGGATTCACATATCCCCATGAGGTGCCACAGAT...TGCTACAACCAAACAGAAGGCAGTCGGTGTGCAGTGTCCAGTGTGCAGAGAGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000423170.1 |
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| CDS-3UTR CCA 90 bp | TCTCTGCACACTGGACACTGCACACCGACTGCCTTCTGTTTGGTTGTAGCATGCACCTGTAAGATCGTGTaGATCTGTTCATCTGAAAGT | + |
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Preference number: 4 (lower is better) Translates to: SLHTGHCTPTAFCLVVACTCKIV*ICSSES Trigger: ACTTTCAGATGAACAGATCCACACGATCTTACAGGT...GCATGCTACAACCAAACAGAAGGCAGTCGGTGTGCAGTGTCCAGTGTGCAGAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000423170.1 |
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| CDS-3UTR CCA 90 bp | ACCGACTGCCTTCTGTTTGGTTGTAGCATGCTGCCGTTCCTGTTCCTGCTCCTGGTTCATCTAGATAGATaGACTCCAATACTTCAACTT | + |
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Preference number: 4 (lower is better) Translates to: TDCLLFGCSMLPFLFLLLVHLDR*TPILQL Trigger: AAGTTGAAGTATTGGAGTCCATCTATCTAGATGAAC...CAGGAGCAGGAACAGGAACGGCAGCATGCTACAACCAAACAGAAGGCAGTCGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000423170.1 |
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| CDS GCA 90 bp | GTGTCACGGGTACCTTTAGGGGCGTGGCACTCCCCTCCCTTTGGGTaGCTCCGTTCGGGCTGTCGCCAGGGACCTCGACTGGGCTTGGGG | + |
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Preference number: 5 (lower is better) Translates to: VSRVPLGAWHSPPFG*LRSGCRQGPRLGLG Trigger: CCCCAAGCCCAGTCGAGGTCCCTGGCGACAGCCCGAACGGAGGCACCCAAAGGGAGGGGAGTGCCACGCCCCTAAAGGTACCCGTGACAC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000295704.7 ENST00000473034.5 ENST00000474339.1 |
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| CDS CCA 90 bp | CTGGGTGTCACGGGTACCTTTAGGGGCGTGGCACTCCCCTCCCTTTaGGTGCCTCCGTTCGGGCTGTCGCCAGGGACCTCGACTGGGCTT | + |
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Preference number: 5 (lower is better) Translates to: LGVTGTFRGVALPSL*VPPFGLSPGTSTGL Trigger: AAGCCCAGTCGAGGTCCCTGGCGACAGCCCGAACGGAGGCACCCAAAGGGAGGGGAGTGCCACGCCCCTAAAGGTACCCGTGACACCCAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000295704.7 ENST00000473034.5 ENST00000474339.1 |
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| CDS GCA 90 bp | CTTAGATTCCAGGCCCAGGGACTCCCTCCGAGTACCAGGCCGGTATaGTCCCTGGCCCCGAGGCAGGCGAGGGTAGGAAGAACCGGGTGT | + |
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Preference number: 5 (lower is better) Translates to: LRFQAQGLPPSTRPV*SLAPRQARVGRTGC Trigger: ACACCCGGTTCTTCCTACCCTCGCCTGCCTCGGGGCCAGGGAGCATACCGGCCTGGTACTCGGAGGGAGTCCCTGGGCCTGGAATCTAAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000295704.7 ENST00000473034.5 |
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| CDS CCA 90 bp | TCAGGAGGTGGCAGTTCCTGGGTGTCACGGGTACCTTTAGGGGCGTaGCACTCCCCTCCCTTTGGGTGCCTCCGTTCGGGCTGTCGCCAG | + |
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Preference number: 5 (lower is better) Translates to: SGGGSSWVSRVPLGA*HSPPFGCLRSGCRQ Trigger: CTGGCGACAGCCCGAACGGAGGCACCCAAAGGGAGGGGAGTGCCACGCCCCTAAAGGTACCCGTGACACCCAGGAACTGCCACCTCCTGA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000295704.7 ENST00000473034.5 ENST00000474339.1 |
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| CDS GCA 90 bp | CCTCTGGTAGAGCCGCTTGCGTTCTTCTTGCTGGCGCAAGCTCTCTaGACTGGGCTGGTACAGCTCCTGGAAGGAAGAATGGCAGAGAGG | + |
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Preference number: 5 (lower is better) Translates to: PLVEPLAFFLLAQAL*TGLVQLLEGRMAER Trigger: CCTCTCTGCCATTCTTCCTTCCAGGAGCTGTACCAGCCCAGTGCAGAGAGCTTGCGCCAGCAAGAAGAACGCAAGCGGCTCTACCAGAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000474339.1 |
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| CDS CCA 90 bp | CCACAGGCAGAGGAGGTGGCAAAGTGGATTGGACGGCTGGTGAGGTaGATAGTTCTGCTGCAAGGGTGCTGGGTGGTTGGGATCCTTTGG | + |
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Preference number: 5 (lower is better) Translates to: PQAEEVAKWIGRLVR*IVLLQGCWVVGILW Trigger: CCAAAGGATCCCAACCACCCAGCACCCTTGCAGCAGAACTATCCACCTCACCAGCCGTCCAATCCACTTTGCCACCTCCTCTGCCTGTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000295704.7 ENST00000473034.5 ENST00000474339.1 |
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| CDS CCA 90 bp | CATATGTGCTGGGTCGCCACAGGCAGAGGAGGTGGCAAAGTGGATTaGACGGCTGGTGAGGTGGATAGTTCTGCTGCAAGGGTGCTGGGT | + |
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Preference number: 5 (lower is better) Translates to: HMCWVATGRGGGKVD*TAGEVDSSAARVLG Trigger: ACCCAGCACCCTTGCAGCAGAACTATCCACCTCACCAGCCGTCCAATCCACTTTGCCACCTCCTCTGCCTGTGGCGACCCAGCACATATG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000295704.7 ENST00000473034.5 ENST00000474339.1 |
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| CDS TCA 90 bp | TGCAAGGGTGCTGGGTGGTTGGGATCCTTTGGAGACATCTACAGCTaGCTCAGGTTCCGCAGGGGCAGGAGGCTGCTGAAGGCTGATGAA | + |
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Preference number: 5 (lower is better) Translates to: CKGAGWLGSFGDIYS*LRFRRGRRLLKADE Trigger: TTCATCAGCCTTCAGCAGCCTCCTGCCCCTGCGGAACCTGAGTCAGCTGTAGATGTCTCCAAAGGATCCCAACCACCCAGCACCCTTGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000295704.7 ENST00000473034.5 ENST00000474339.1 |
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| CDS CCA 90 bp | TCTCACATATGTGCTGGGTCGCCACAGGCAGAGGAGGTGGCAAAGTaGATTGGACGGCTGGTGAGGTGGATAGTTCTGCTGCAAGGGTGC | + |
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Preference number: 5 (lower is better) Translates to: SHICAGSPQAEEVAK*IGRLVRWIVLLQGC Trigger: GCACCCTTGCAGCAGAACTATCCACCTCACCAGCCGTCCAATCCACTTTGCCACCTCCTCTGCCTGTGGCGACCCAGCACATATGTGAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000295704.7 ENST00000473034.5 ENST00000474339.1 |
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| CDS TCA 90 bp | GTGGCACCTCATGGGGATACTCTGCTGGGACCTGAAGCACCAGAGTaGAGCAGACATACTGTGAATCCTGGTCCTCTGCAGTGGCAGGAT | + |
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Preference number: 5 (lower is better) Translates to: VAPHGDTLLGPEAPE*SRHTVNPGPLQWQD Trigger: ATCCTGCCACTGCAGAGGACCAGGATTCACAGTATGTCTGCTTCACTCTGGTGCTTCAGGTCCCAGCAGAGTATCCCCATGAGGTGCCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000295704.7 ENST00000463188.5 |
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| CDS TCA 90 bp | CACACAGTAGGGGCTTCACCTCTGCTGGGACCTGAAGCACCAGAGTaGAGCAGACATACTGTGAATCCTGGTCCTCTGCAGTGGCAGGAT | + |
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Preference number: 5 (lower is better) Translates to: HTVGASPLLGPEAPE*SRHTVNPGPLQWQD Trigger: ATCCTGCCACTGCAGAGGACCAGGATTCACAGTATGTCTGCTTCACTCTGGTGCTTCAGGTCCCAGCAGAGGTGAAGCCCCTACTGTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000473034.5 |
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| CDS GCA 90 bp | CCGACTGCCTTCTGTTTGGTTGTAGCATGCTGCCGTTCCTGTTCCTaGTCCTGTCCTTGTGCCTTCAGCTCTTGCTCCATGTGCTGGATG | + |
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Preference number: 5 (lower is better) Translates to: PTAFCLVVACCRSCS*SCPCAFSSCSMCWM Trigger: CATCCAGCACATGGAGCAAGAGCTGAAGGCACAAGGACAGGAGCAGGAACAGGAACGGCAGCATGCTACAACCAAACAGAAGGCAGTCGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000295704.7 ENST00000423170.1 ENST00000463188.5 ENST00000473034.5 |
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| CDS GCA 90 bp | ACTGGACACTGCACACCGACTGCCTTCTGTTTGGTTGTAGCATGCTaGCGTTCCTGTTCCTGCTCCTGTCCTTGTGCCTTCAGCTCTTGC | + |
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Preference number: 5 (lower is better) Translates to: TGHCTPTAFCLVVAC*RSCSCSCPCAFSSC Trigger: GCAAGAGCTGAAGGCACAAGGACAGGAGCAGGAACAGGAACGGCAGCATGCTACAACCAAACAGAAGGCAGTCGGTGTGCAGTGTCCAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000295704.7 ENST00000423170.1 ENST00000463188.5 ENST00000473034.5 |
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| CDS GCA 90 bp | CACACTGGACACTGCACACCGACTGCCTTCTGTTTGGTTGTAGCATaGTGCCGTTCCTGTTCCTGCTCCTGTCCTTGTGCCTTCAGCTCT | + |
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Preference number: 5 (lower is better) Translates to: HTGHCTPTAFCLVVA*CRSCSCSCPCAFSS Trigger: AGAGCTGAAGGCACAAGGACAGGAGCAGGAACAGGAACGGCAGCATGCTACAACCAAACAGAAGGCAGTCGGTGTGCAGTGTCCAGTGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000295704.7 ENST00000423170.1 ENST00000463188.5 ENST00000473034.5 |
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| CDS-3UTR CAA 90 bp | ATACACGAGGGGCTCTCTGCACACTGGACACTGCACACCGACTGCCTTCTGTTTTTCCTGCTCCTGTCCTaGTGCCTTCAGCTCTTGCTC | + |
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Preference number: 5 (lower is better) Translates to: IHEGLSAHWTLHTDCLLFFLLLS*CLQLLL Trigger: GAGCAAGAGCTGAAGGCACAAGGACAGGAGCAGGAA...AAACAGAAGGCAGTCGGTGTGCAGTGTCCAGTGTGCAGAGAGCCCCTCGTGTAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000423170.1 |
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| CDS-3UTR CAA 90 bp | TGGACACTGCACACCGACTGCCTTCTGTTTGGTTGTAGCATGCTGCCGTTCCTGCCGACTGCCTTCTGTTaGGTTGTAGCATGCTGCCGT | + |
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Preference number: 5 (lower is better) Translates to: WTLHTDCLLFGCSMLPFLPTAFC*VVACCR Trigger: ACGGCAGCATGCTACAACCAAACAGAAGGCAGTCGG...CAGGAACGGCAGCATGCTACAACCAAACAGAAGGCAGTCGGTGTGCAGTGTCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000423170.1 |
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| CDS GCA 90 bp | TTTGGTTGTAGCATGCTGCCGTTCCTGTTCCTGCTCCTGTCCTTGTaGCTTCAGCTCTTGCTCCATGTGCTGGATGTACCGAGCAAGGCA | + |
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Preference number: 5 (lower is better) Translates to: FGCSMLPFLFLLLSL*LQLLLHVLDVPSKA Trigger: TGCCTTGCTCGGTACATCCAGCACATGGAGCAAGAGCTGAAGGCACAAGGACAGGAGCAGGAACAGGAACGGCAGCATGCTACAACCAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000295704.7 ENST00000423170.1 ENST00000463188.5 ENST00000473034.5 |
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| CDS GCA 90 bp | AAGTGGATTGGACGGCTGGTGAGGTGGATAGTTCTGCTGCAAGGGTaGTGGGTGGTTGGGATCCTTTGGAGACATCTACAGCTGACTCAG | + |
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Preference number: 5 (lower is better) Translates to: KWIGRLVRWIVLLQG*WVVGILWRHLQLTQ Trigger: CTGAGTCAGCTGTAGATGTCTCCAAAGGATCCCAACCACCCAGCACCCTTGCAGCAGAACTATCCACCTCACCAGCCGTCCAATCCACTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000295704.7 ENST00000473034.5 ENST00000474339.1 |
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| CDS CCA 90 bp | TGGATTGGACGGCTGGTGAGGTGGATAGTTCTGCTGCAAGGGTGCTaGGTGGTTGGGATCCTTTGGAGACATCTACAGCTGACTCAGGTT | + |
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Preference number: 5 (lower is better) Translates to: WIGRLVRWIVLLQGC*VVGILWRHLQLTQV Trigger: AACCTGAGTCAGCTGTAGATGTCTCCAAAGGATCCCAACCACCCAGCACCCTTGCAGCAGAACTATCCACCTCACCAGCCGTCCAATCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000295704.7 ENST00000473034.5 ENST00000474339.1 |
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| CDS TCA 90 bp | GTCCTCTGCAGTGGCAGGATGCAAAGTGATGTAGATCTCCCATGGTaGAGTTCTGCAGGTGGATCAAGTGGACACGCAGATGTGACTGGG | + |
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Preference number: 5 (lower is better) Translates to: VLCSGRMQSDVDLPW*SSAGGSSGHADVTG Trigger: CCCAGTCACATCTGCGTGTCCACTTGATCCACCTGCAGAACTTCACCATGGGAGATCTACATCACTTTGCATCCTGCCACTGCAGAGGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000473034.5 |
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| CDS-3UTR CAA 90 bp | AGGGGCTCTCTGCACACTGGACACTGCACACCGACTGCCTTCTGTTTGGTTGTATTGTGCCTTCAGCTCTaGCTCCATGTGCTGGATGTA | + |
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Preference number: 5 (lower is better) Translates to: RGSLHTGHCTPTAFCLVVLCLQL*LHVLDV Trigger: TACATCCAGCACATGGAGCAAGAGCTGAAGGCACAA...TACAACCAAACAGAAGGCAGTCGGTGTGCAGTGTCCAGTGTGCAGAGAGCCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000423170.1 |
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| CDS TCA 90 bp | CACCTCTGCTGGGACCTGAAGCACCAGAGTGAAGCAGACATACTGTaGATCCTGGTCCTCTGCAGTGGCAGGATGCAAAGTGATGTAGAT | + |
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Preference number: 5 (lower is better) Translates to: HLCWDLKHQSEADIL*ILVLCSGRMQSDVD Trigger: ATCTACATCACTTTGCATCCTGCCACTGCAGAGGACCAGGATTCACAGTATGTCTGCTTCACTCTGGTGCTTCAGGTCCCAGCAGAGGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000473034.5 |
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| CDS TCA 90 bp | ATACTCTGCTGGGACCTGAAGCACCAGAGTGAAGCAGACATACTGTaGATCCTGGTCCTCTGCAGTGGCAGGATGCAAAGTGATGTAGAT | + |
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Preference number: 5 (lower is better) Translates to: ILCWDLKHQSEADIL*ILVLCSGRMQSDVD Trigger: ATCTACATCACTTTGCATCCTGCCACTGCAGAGGACCAGGATTCACAGTATGTCTGCTTCACTCTGGTGCTTCAGGTCCCAGCAGAGTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000295704.7 ENST00000463188.5 |
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| CDS TCA 90 bp | AGACATACTGTGAATCCTGGTCCTCTGCAGTGGCAGGATGCAAAGTaGTGTAGATCTCCCATGGTGAAGTTCTGCAGGTGGATCAAGTGG | + |
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Preference number: 5 (lower is better) Translates to: RHTVNPGPLQWQDAK*CRSPMVKFCRWIKW Trigger: CCACTTGATCCACCTGCAGAACTTCACCATGGGAGATCTACATCACTTTGCATCCTGCCACTGCAGAGGACCAGGATTCACAGTATGTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000473034.5 |
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| CDS GCA 72 bp | CAGGCCCAGGGACTCCCTCCGAGTACCAGGCCGGTATaGTCCCTGGCCCCGAGGCAGGCGAGGGTAGGAAGA | + |
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Preference number: 6 (lower is better) Translates to: QAQGLPPSTRPV*SLAPRQARVGR Trigger: TCTTCCTACCCTCGCCTGCCTCGGGGCCAGGGAGCATACCGGCCTGGTACTCGGAGGGAGTCCCTGGGCCTG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000295704.7 ENST00000473034.5 |
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| CDS CCA 72 bp | ACGGGTACCTTTAGGGGCGTGGCACTCCCCTCCCTTTaGGTGCCTCCGTTCGGGCTGTCGCCAGGGACCTCG | + |
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Preference number: 6 (lower is better) Translates to: TGTFRGVALPSL*VPPFGLSPGTS Trigger: CGAGGTCCCTGGCGACAGCCCGAACGGAGGCACCCAAAGGGAGGGGAGTGCCACGCCCCTAAAGGTACCCGT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000295704.7 ENST00000473034.5 ENST00000474339.1 |
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| CDS GCA 72 bp | GTACCTTTAGGGGCGTGGCACTCCCCTCCCTTTGGGTaGCTCCGTTCGGGCTGTCGCCAGGGACCTCGACTG | + |
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Preference number: 6 (lower is better) Translates to: VPLGAWHSPPFG*LRSGCRQGPRL Trigger: CAGTCGAGGTCCCTGGCGACAGCCCGAACGGAGGCACCCAAAGGGAGGGGAGTGCCACGCCCCTAAAGGTAC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000295704.7 ENST00000473034.5 ENST00000474339.1 |
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| CDS CCA 72 bp | GGCAGTTCCTGGGTGTCACGGGTACCTTTAGGGGCGTaGCACTCCCCTCCCTTTGGGTGCCTCCGTTCGGGC | + |
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Preference number: 6 (lower is better) Translates to: GSSWVSRVPLGA*HSPPFGCLRSG Trigger: GCCCGAACGGAGGCACCCAAAGGGAGGGGAGTGCCACGCCCCTAAAGGTACCCGTGACACCCAGGAACTGCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000295704.7 ENST00000473034.5 ENST00000474339.1 |
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| CDS GCA 72 bp | GAGCCGCTTGCGTTCTTCTTGCTGGCGCAAGCTCTCTaGACTGGGCTGGTACAGCTCCATGGGCTGTTGGGG | + |
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Preference number: 6 (lower is better) Translates to: EPLAFFLLAQAL*TGLVQLHGLLG Trigger: CCCCAACAGCCCATGGAGCTGTACCAGCCCAGTGCAGAGAGCTTGCGCCAGCAAGAAGAACGCAAGCGGCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000295704.7 ENST00000473034.5 |
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| CDS CAA 72 bp | CTCCTGCTGCCTCTGGTAGAGCCGCTTGCGTTCTTCTaGCTGGCGCAAGCTCTCTGCACTGGGCTGGTACAG | + |
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Preference number: 6 (lower is better) Translates to: LLLPLVEPLAFF*LAQALCTGLVQ Trigger: CTGTACCAGCCCAGTGCAGAGAGCTTGCGCCAGCAAGAAGAACGCAAGCGGCTCTACCAGAGGCAGCAGGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000295704.7 ENST00000473034.5 ENST00000474339.1 |
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| CDS TCA 72 bp | GCTGGGTGGTTGGGATCCTTTGGAGACATCTACAGCTaGCTCAGGTTCCGCAGGGGCAGGAGGCTGCTGAAG | + |
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Preference number: 6 (lower is better) Translates to: AGWLGSFGDIYS*LRFRRGRRLLK Trigger: CTTCAGCAGCCTCCTGCCCCTGCGGAACCTGAGTCAGCTGTAGATGTCTCCAAAGGATCCCAACCACCCAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000295704.7 ENST00000473034.5 ENST00000474339.1 |
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| CDS GCA 72 bp | TTCAACTTCAGAGGGAAGGACCCAGTCCTCCTCCCCTaGAGCTGCAGACGCAGACGCCGCCATATCTTCACC | + |
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Preference number: 6 (lower is better) Translates to: FNFRGKDPVLLP*SCRRRRRHIFT Trigger: GGTGAAGATATGGCGGCGTCTGCGTCTGCAGCTGCAGGGGAGGAGGACTGGGTCCTTCCCTCTGAAGTTGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000295704.7 ENST00000463188.5 |
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| CDS CCA 72 bp | GCTTGCGTTCTTCTTGCTGGCGCAAGCTCTCTGCACTaGGCTGGTACAGCTCCATGGGCTGTTGGGGTTCAG | + |
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Preference number: 6 (lower is better) Translates to: ACVLLAGASSLH*AGTAPWAVGVQ Trigger: CTGAACCCCAACAGCCCATGGAGCTGTACCAGCCCAGTGCAGAGAGCTTGCGCCAGCAAGAAGAACGCAAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000295704.7 ENST00000473034.5 |
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| CDS CCA 72 bp | GAGGAGGTGGCAAAGTGGATTGGACGGCTGGTGAGGTaGATAGTTCTGCTGCAAGGGTGCTGGGTGGTTGGG | + |
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Preference number: 6 (lower is better) Translates to: EEVAKWIGRLVR*IVLLQGCWVVG Trigger: CCCAACCACCCAGCACCCTTGCAGCAGAACTATCCACCTCACCAGCCGTCCAATCCACTTTGCCACCTCCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000295704.7 ENST00000473034.5 ENST00000474339.1 |
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| CDS GCA 72 bp | GAGCCGCTTGCGTTCTTCTTGCTGGCGCAAGCTCTCTaGACTGGGCTGGTACAGCTCCTGGAAGGAAGAATG | + |
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Preference number: 6 (lower is better) Translates to: EPLAFFLLAQAL*TGLVQLLEGRM Trigger: CATTCTTCCTTCCAGGAGCTGTACCAGCCCAGTGCAGAGAGCTTGCGCCAGCAAGAAGAACGCAAGCGGCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000474339.1 |
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| CDS CAA 90 bp | ATGCTGCCGTTCCTGTTCCTGCTCCTGTCCTTGTGCCTTCAGCTCTaGCTCCATGTGCTGGATGTACCGAGCAAGGCAGTGGCAGTGGAA | + |
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Preference number: 6 (lower is better) Translates to: MLPFLFLLLSLCLQL*LHVLDVPSKAVAVE Trigger: TTCCACTGCCACTGCCTTGCTCGGTACATCCAGCACATGGAGCAAGAGCTGAAGGCACAAGGACAGGAGCAGGAACAGGAACGGCAGCAT 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000295704.7 ENST00000423170.1 ENST00000463188.5 ENST00000473034.5 |
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| CDS TCA 72 bp | GGGGCTTCACCTCTGCTGGGACCTGAAGCACCAGAGTaGAGCAGACATACTGTGAATCCTGGTCCTCTGCAG | + |
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Preference number: 6 (lower is better) Translates to: GASPLLGPEAPE*SRHTVNPGPLQ Trigger: CTGCAGAGGACCAGGATTCACAGTATGTCTGCTTCACTCTGGTGCTTCAGGTCCCAGCAGAGGTGAAGCCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000473034.5 |
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| CDS GCA 72 bp | AGCATGCTGCCGTTCCTGTTCCTGCTCCTGTCCTTGTaGCTTCAGCTCTTGCTCCATGTGCTGGATGTACCG | + |
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Preference number: 6 (lower is better) Translates to: SMLPFLFLLLSL*LQLLLHVLDVP Trigger: CGGTACATCCAGCACATGGAGCAAGAGCTGAAGGCACAAGGACAGGAGCAGGAACAGGAACGGCAGCATGCT 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000295704.7 ENST00000423170.1 ENST00000463188.5 ENST00000473034.5 |
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| CDS GCA 72 bp | GGACGGCTGGTGAGGTGGATAGTTCTGCTGCAAGGGTaGTGGGTGGTTGGGATCCTTTGGAGACATCTACAG | + |
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Preference number: 6 (lower is better) Translates to: GRLVRWIVLLQG*WVVGILWRHLQ Trigger: CTGTAGATGTCTCCAAAGGATCCCAACCACCCAGCACCCTTGCAGCAGAACTATCCACCTCACCAGCCGTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000295704.7 ENST00000473034.5 ENST00000474339.1 |
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| CDS CCA 72 bp | CGTTCTTCTTGCTGGCGCAAGCTCTCTGCACTGGGCTaGTACAGCTCCTGGAAGGAAGAATGGCAGAGAGGA | + |
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Preference number: 6 (lower is better) Translates to: RSSCWRKLSALG*YSSWKEEWQRG Trigger: TCCTCTCTGCCATTCTTCCTTCCAGGAGCTGTACCAGCCCAGTGCAGAGAGCTTGCGCCAGCAAGAAGAACG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000474339.1 |
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| CDS CCA 72 bp | GCTTGCGTTCTTCTTGCTGGCGCAAGCTCTCTGCACTaGGCTGGTACAGCTCCTGGAAGGAAGAATGGCAGA | + |
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Preference number: 6 (lower is better) Translates to: ACVLLAGASSLH*AGTAPGRKNGR Trigger: TCTGCCATTCTTCCTTCCAGGAGCTGTACCAGCCCAGTGCAGAGAGCTTGCGCCAGCAAGAAGAACGCAAGC 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000474339.1 |
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| CDS GCA 72 bp | TGCACACCGACTGCCTTCTGTTTGGTTGTAGCATGCTaGCGTTCCTGTTCCTGCTCCTGTCCTTGTGCCTTC | + |
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Preference number: 6 (lower is better) Translates to: CTPTAFCLVVAC*RSCSCSCPCAF Trigger: GAAGGCACAAGGACAGGAGCAGGAACAGGAACGGCAGCATGCTACAACCAAACAGAAGGCAGTCGGTGTGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000295704.7 ENST00000423170.1 ENST00000463188.5 ENST00000473034.5 |
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| CDS CAA 72 bp | TTCCTGTTCCTGCTCCTGTCCTTGTGCCTTCAGCTCTaGCTCCATGTGCTGGATGTACCGAGCAAGGCAGTG | + |
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Preference number: 6 (lower is better) Translates to: FLFLLLSLCLQL*LHVLDVPSKAV Trigger: CACTGCCTTGCTCGGTACATCCAGCACATGGAGCAAGAGCTGAAGGCACAAGGACAGGAGCAGGAACAGGAA 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000295704.7 ENST00000423170.1 ENST00000463188.5 ENST00000473034.5 ENST00000497832.1 |
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| CDS CAA 90 bp | CTGTTTGGTTGTAGCATGCTGCCGTTCCTGTTCCTGCTCCTGTCCTaGTGCCTTCAGCTCTTGCTCCATGTGCTGGATGTACCGAGCAAG | + |
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Preference number: 6 (lower is better) Translates to: LFGCSMLPFLFLLLS*CLQLLLHVLDVPSK Trigger: CTTGCTCGGTACATCCAGCACATGGAGCAAGAGCTGAAGGCACAAGGACAGGAGCAGGAACAGGAACGGCAGCATGCTACAACCAAACAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000295704.7 ENST00000423170.1 ENST00000463188.5 ENST00000473034.5 |
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| CDS TCA 72 bp | CATGGGGATACTCTGCTGGGACCTGAAGCACCAGAGTaGAGCAGACATACTGTGAATCCTGGTCCTCTGCAG | + |
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Preference number: 6 (lower is better) Translates to: HGDTLLGPEAPE*SRHTVNPGPLQ Trigger: CTGCAGAGGACCAGGATTCACAGTATGTCTGCTTCACTCTGGTGCTTCAGGTCCCAGCAGAGTATCCCCATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000295704.7 ENST00000463188.5 |
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| CDS CAA 72 bp | TGTAGCATGCTGCCGTTCCTGTTCCTGCTCCTGTCCTaGTGCCTTCAGCTCTTGCTCCATGTGCTGGATGTA | + |
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Preference number: 6 (lower is better) Translates to: CSMLPFLFLLLS*CLQLLLHVLDV Trigger: TACATCCAGCACATGGAGCAAGAGCTGAAGGCACAAGGACAGGAGCAGGAACAGGAACGGCAGCATGCTACA 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000295704.7 ENST00000423170.1 ENST00000463188.5 ENST00000473034.5 |
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| CDS TCA 72 bp | TGGGACCTGAAGCACCAGAGTGAAGCAGACATACTGTaGATCCTGGTCCTCTGCAGTGGCAGGATGCAAAGT | + |
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Preference number: 6 (lower is better) Translates to: WDLKHQSEADIL*ILVLCSGRMQS Trigger: ACTTTGCATCCTGCCACTGCAGAGGACCAGGATTCACAGTATGTCTGCTTCACTCTGGTGCTTCAGGTCCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000295704.7 ENST00000463188.5 ENST00000473034.5 |
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| CDS TCA 72 bp | GTGAATCCTGGTCCTCTGCAGTGGCAGGATGCAAAGTaGTGTAGATCTCCCATGGTGAAGTTCTGCAGGTGG | + |
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Preference number: 6 (lower is better) Translates to: VNPGPLQWQDAK*CRSPMVKFCRW Trigger: CCACCTGCAGAACTTCACCATGGGAGATCTACATCACTTTGCATCCTGCCACTGCAGAGGACCAGGATTCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000473034.5 |
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| CDS CCA 72 bp | CTTTCTGGGTTTCGCCCAACCTTTGCTGATTTGACCTaGTCCCTGGAATCTTCTCACATATGTGCTGGGTCG | + |
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Preference number: 6 (lower is better) Translates to: LSGFRPTFADLT*SLESSHICAGS Trigger: CGACCCAGCACATATGTGAGAAGATTCCAGGGACCAGGTCAAATCAGCAAAGGTTGGGCGAAACCCAGAAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000295704.7 ENST00000473034.5 ENST00000474339.1 |
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| CDS CAA 90 bp | ATAGAACCTCTCCTCATTACTAGGGGGACTCCTGCCCACCACTGGTaGAATACATACCTGCCATTTCCTTTAATCACCTGTAGTTCATCT | + |
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Preference number: 6 (lower is better) Translates to: IEPLLITRGTPAHHW*NTYLPFPLITCSSS Trigger: AGATGAACTACAGGTGATTAAAGGAAATGGCAGGTATGTATTCAACCAGTGGTGGGCAGGAGTCCCCCTAGTAATGAGGAGAGGTTCTAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000473034.5 |
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| CDS CCA 72 bp | AGTGGGCAAAGGAAGTACACATTGGACTCTTTCTTTTaGGGTAGGATTAAAGGAATAGCTTTTGTCTACACA | + |
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Preference number: 6 (lower is better) Translates to: SGQRKYTLDSFF*GRIKGIAFVYT Trigger: TGTGTAGACAAAAGCTATTCCTTTAATCCTACCCCAAAAGAAAGAGTCCAATGTGTACTTCCTTTGCCCACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000473034.5 |
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