RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RNF24 (Homo sapiens)

Ensembl gene IDs: ENSG00000101236

Ensembl transcript IDs: ENST00000336095.10, ENST00000358395.11, ENST00000432261.6, ENST00000545616.2

Found 793 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GCCACACCTGCTCCCCCGACCGGGGGCCTGGGAGGGAAGGGCAGATaGAGAGGAACGGTGTGCAGTGGGCGTGAGATGCAGATCCACCAG +
Preference number: 1 (lower is better)
Translates to: ATPAPPTGGLGGKGR*RGTVCSGREMQIHQ
Trigger: CTGGTGGATCTGCATCTCACGCCCACTGCACACCGTTCCTCTCCATCTGCCCTTCCCTCCCAGGCCCCCGGTCGGGGGAGCAGGTGTGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
3UTR GCA 90 bp CCGACCGGGGGCCTGGGAGGGAAGGGCAGATGGAGAGGAACGGTGTaGAGTGGGCGTGAGATGCAGATCCACCAGGCTTGGGACTGGCAA +
Preference number: 1 (lower is better)
Translates to: PTGGLGGKGRWRGTV*SGREMQIHQAWDWQ
Trigger: TTGCCAGTCCCAAGCCTGGTGGATCTGCATCTCACGCCCACTGCACACCGTTCCTCTCCATCTGCCCTTCCCTCCCAGGCCCCCGGTCGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
3UTR GCA 90 bp AAGACCAGCTGTCACCAGAAGGGAGTTCCTAACACTTGCCACACCTaGTCCCCCGACCGGGGGCCTGGGAGGGAAGGGCAGATGGAGAGG +
Preference number: 1 (lower is better)
Translates to: KTSCHQKGVPNTCHT*SPDRGPGREGQMER
Trigger: CCTCTCCATCTGCCCTTCCCTCCCAGGCCCCCGGTCGGGGGAGCAGGTGTGGCAAGTGTTAGGAACTCCCTTCTGGTGACAGCTGGTCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
3UTR GCA 90 bp CACTCTAGGAAGACCAGCTGTCACCAGAAGGGAGTTCCTAACACTTaGCACACCTGCTCCCCCGACCGGGGGCCTGGGAGGGAAGGGCAG +
Preference number: 1 (lower is better)
Translates to: HSRKTSCHQKGVPNT*HTCSPDRGPGREGQ
Trigger: CTGCCCTTCCCTCCCAGGCCCCCGGTCGGGGGAGCAGGTGTGGCAAGTGTTAGGAACTCCCTTCTGGTGACAGCTGGTCTTCCTAGAGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
3UTR TCA 90 bp CCTGGGAGGGAAGGGCAGATGGAGAGGAACGGTGTGCAGTGGGCGTaGGATGCAGATCCACCAGGCTTGGGACTGGCAAAGGGAGCTGAG +
Preference number: 1 (lower is better)
Translates to: PGREGQMERNGVQWA*DADPPGLGLAKGAE
Trigger: CTCAGCTCCCTTTGCCAGTCCCAAGCCTGGTGGATCTGCATCTCACGCCCACTGCACACCGTTCCTCTCCATCTGCCCTTCCCTCCCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
3UTR GCA 90 bp CCTCCTGGATCACTCAGGGACAGTGTGGACTCAGGGCCCACTCCCTaGTGGGGCTCTGGACGGGCCTTACTGGTGCATAGGAGAGGGAAA +
Preference number: 1 (lower is better)
Translates to: PPGSLRDSVDSGPTP*WGSGRALLVHRRGK
Trigger: TTTCCCTCTCCTATGCACCAGTAAGGCCCGTCCAGAGCCCCAGCAGGGAGTGGGCCCTGAGTCCACACTGTCCCTGAGTGATCCAGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
3UTR CCA 90 bp GTATCAGCAGCCCCCATGACACCAGGCCTGCTGCCTACCAGGCTCTaGGCACCAGCTAACCCCCACAAGAGGTGCCAGGGACGTTACTAC +
Preference number: 1 (lower is better)
Translates to: VSAAPMTPGLLPTRL*APANPHKRCQGRYY
Trigger: GTAGTAACGTCCCTGGCACCTCTTGTGGGGGTTAGCTGGTGCCCAGAGCCTGGTAGGCAGCAGGCCTGGTGTCATGGGGGCTGCTGATAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
3UTR CCA 90 bp CTACACTGGAACCACAGTGCACATGTGGGGATGTGGGCAGCCTCCTaGATCACTCAGGGACAGTGTGGACTCAGGGCCCACTCCCTGCTG +
Preference number: 1 (lower is better)
Translates to: LHWNHSAHVGMWAAS*ITQGQCGLRAHSLL
Trigger: CAGCAGGGAGTGGGCCCTGAGTCCACACTGTCCCTGAGTGATCCAGGAGGCTGCCCACATCCCCACATGTGCACTGTGGTTCCAGTGTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
3UTR CCA 90 bp GGCTCACAGCAGCTACACTGGAACCACAGTGCACATGTGGGGATGTaGGCAGCCTCCTGGATCACTCAGGGACAGTGTGGACTCAGGGCC +
Preference number: 1 (lower is better)
Translates to: GSQQLHWNHSAHVGM*AASWITQGQCGLRA
Trigger: GGCCCTGAGTCCACACTGTCCCTGAGTGATCCAGGAGGCTGCCCACATCCCCACATGTGCACTGTGGTTCCAGTGTAGCTGCTGTGAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
3UTR CCA 90 bp TGGCTCCCTTCTGAGGCAGTGGCAGTGGGCTCACAGCAGCTACACTaGAACCACAGTGCACATGTGGGGATGTGGGCAGCCTCCTGGATC +
Preference number: 1 (lower is better)
Translates to: WLPSEAVAVGSQQLH*NHSAHVGMWAASWI
Trigger: GATCCAGGAGGCTGCCCACATCCCCACATGTGCACTGTGGTTCCAGTGTAGCTGCTGTGAGCCCACTGCCACTGCCTCAGAAGGGAGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
3UTR GCA 90 bp TACTTGGCTCAAGGGCTGCTGGGAAGGTTTGCTGCGACAAAGGCCTaGATGGCCTACAGAGAAACCCATCCATCCGCAGGTGGGGGTGTG +
Preference number: 1 (lower is better)
Translates to: YLAQGLLGRFAATKA*MAYRETHPSAGGGV
Trigger: CACACCCCCACCTGCGGATGGATGGGTTTCTCTGTAGGCCATGCAGGCCTTTGTCGCAGCAAACCTTCCCAGCAGCCCTTGAGCCAAGTA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
ENST00000545616.2
3UTR GCA 90 bp CTGCTGCCTACCAGGCTCTGGGCACCAGCTAACCCCCACAAGAGGTaGCAGGGACGTTACTACAATCCCTGGGTGGTAGCTAAGGAAGCT +
Preference number: 1 (lower is better)
Translates to: LLPTRLWAPANPHKR*QGRYYNPWVVAKEA
Trigger: AGCTTCCTTAGCTACCACCCAGGGATTGTAGTAACGTCCCTGGCACCTCTTGTGGGGGTTAGCTGGTGCCCAGAGCCTGGTAGGCAGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
3UTR GCA 90 bp ATGAGCCTTGTGGGCACTGCCTCACCAACCACTGGTGGCTGGTTGTaGTGGTTTTACTTGGCTCAAGGGCTGCTGGGAAGGTTTGCTGCG +
Preference number: 1 (lower is better)
Translates to: MSLVGTASPTTGGWL*WFYLAQGLLGRFAA
Trigger: CGCAGCAAACCTTCCCAGCAGCCCTTGAGCCAAGTAAAACCAGCACAACCAGCCACCAGTGGTTGGTGAGGCAGTGCCCACAAGGCTCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
3UTR CCA 90 bp AGCCTTGTGGGCACTGCCTCACCAACCACTGGTGGCTGGTTGTGCTaGTTTTACTTGGCTCAAGGGCTGCTGGGAAGGTTTGCTGCGACA +
Preference number: 1 (lower is better)
Translates to: SLVGTASPTTGGWLC*FYLAQGLLGRFAAT
Trigger: TGTCGCAGCAAACCTTCCCAGCAGCCCTTGAGCCAAGTAAAACCAGCACAACCAGCCACCAGTGGTTGGTGAGGCAGTGCCCACAAGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
ENST00000545616.2
3UTR CCA 90 bp CAGGGGCCACCTGCCCCTATTTGGCCATTTCTGTCCTGCCTTCCCTaGCTAGGCAAGCATAGGCTTCAAGGACCTTATCTGCCAGGGACA +
Preference number: 1 (lower is better)
Translates to: QGPPAPIWPFLSCLP*LGKHRLQGPYLPGT
Trigger: TGTCCCTGGCAGATAAGGTCCTTGAAGCCTATGCTTGCCTAGCCAGGGAAGGCAGGACAGAAATGGCCAAATAGGGGCAGGTGGCCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
3UTR CCA 90 bp AGAGGAACGGTGTGCAGTGGGCGTGAGATGCAGATCCACCAGGCTTaGGACTGGCAAAGGGAGCTGAGAAGAGAGTTCCCCCAAAGCACA +
Preference number: 1 (lower is better)
Translates to: RGTVCSGREMQIHQA*DWQRELRREFPQST
Trigger: TGTGCTTTGGGGGAACTCTCTTCTCAGCTCCCTTTGCCAGTCCCAAGCCTGGTGGATCTGCATCTCACGCCCACTGCACACCGTTCCTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
3UTR GCA 90 bp CAACCACTGGTGGCTGGTTGTGCTGGTTTTACTTGGCTCAAGGGCTaGTGGGAAGGTTTGCTGCGACAAAGGCCTGCATGGCCTACAGAG +
Preference number: 1 (lower is better)
Translates to: QPLVAGCAGFTWLKG*WEGLLRQRPAWPTE
Trigger: CTCTGTAGGCCATGCAGGCCTTTGTCGCAGCAAACCTTCCCAGCAGCCCTTGAGCCAAGTAAAACCAGCACAACCAGCCACCAGTGGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
ENST00000545616.2
3UTR GCA 90 bp AGCAGACCCAAGGTGGTGCTGAGTGCAGAGTGCAGAGCATTCTTGTaGTCTCCTCTCATGGCTGGAACTATCTGGGCTTTGCGCCCTGGT +
Preference number: 1 (lower is better)
Translates to: SRPKVVLSAECRAFL*SPLMAGTIWALRPG
Trigger: ACCAGGGCGCAAAGCCCAGATAGTTCCAGCCATGAGAGGAGAGCACAAGAATGCTCTGCACTCTGCACTCAGCACCACCTTGGGTCTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
3UTR GCA 90 bp AGACCTTCCCAGGGGCCACCTGCCCCTATTTGGCCATTTCTGTCCTaGCTTCCCTGGCTAGGCAAGCATAGGCTTCAAGGACCTTATCTG +
Preference number: 1 (lower is better)
Translates to: RPSQGPPAPIWPFLS*LPWLGKHRLQGPYL
Trigger: CAGATAAGGTCCTTGAAGCCTATGCTTGCCTAGCCAGGGAAGGCAGGACAGAAATGGCCAAATAGGGGCAGGTGGCCCCTGGGAAGGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
3UTR CCA 90 bp GGCATACAACATGAGCCTTGTGGGCACTGCCTCACCAACCACTGGTaGCTGGTTGTGCTGGTTTTACTTGGCTCAAGGGCTGCTGGGAAG +
Preference number: 1 (lower is better)
Translates to: GIQHEPCGHCLTNHW*LVVLVLLGSRAAGK
Trigger: CTTCCCAGCAGCCCTTGAGCCAAGTAAAACCAGCACAACCAGCCACCAGTGGTTGGTGAGGCAGTGCCCACAAGGCTCATGTTGTATGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
3UTR CCA 90 bp TCTCAAAAAGCCACTGCTCTTTGGAGCCACTCGAGAGGTTCACAGTaGCTCCCTTCTGAGGCAGTGGCAGTGGGCTCACAGCAGCTACAC +
Preference number: 1 (lower is better)
Translates to: SQKATALWSHSRGSQ*LPSEAVAVGSQQLH
Trigger: GTGTAGCTGCTGTGAGCCCACTGCCACTGCCTCAGAAGGGAGCCACTGTGAACCTCTCGAGTGGCTCCAAAGAGCAGTGGCTTTTTGAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
3UTR CCA 90 bp AGGCCAAAGGGTCGGCATTCCCTTCATCCAGCCGGGCCAGAAGTATaGGCCATTCTCAAAAAGCCACTGCTCTTTGGAGCCACTCGAGAG +
Preference number: 1 (lower is better)
Translates to: RPKGRHSLHPAGPEV*AILKKPLLFGATRE
Trigger: CTCTCGAGTGGCTCCAAAGAGCAGTGGCTTTTTGAGAATGGCCCATACTTCTGGCCCGGCTGGATGAAGGGAATGCCGACCCTTTGGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
3UTR CCA 90 bp CTTGTGCTCTCCTCTCATGGCTGGAACTATCTGGGCTTTGCGCCCTaGTCCAGTGCTACGTATCAACCCCCTCAACATGCCTGTGGCTCT +
Preference number: 1 (lower is better)
Translates to: LVLSSHGWNYLGFAP*SSATYQPPQHACGS
Trigger: AGAGCCACAGGCATGTTGAGGGGGTTGATACGTAGCACTGGACCAGGGCGCAAAGCCCAGATAGTTCCAGCCATGAGAGGAGAGCACAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
3UTR CCA 90 bp ACGGTGTGCAGTGGGCGTGAGATGCAGATCCACCAGGCTTGGGACTaGCAAAGGGAGCTGAGAAGAGAGTTCCCCCAAAGCACAAACAAG +
Preference number: 1 (lower is better)
Translates to: TVCSGREMQIHQAWD*QRELRREFPQSTNK
Trigger: CTTGTTTGTGCTTTGGGGGAACTCTCTTCTCAGCTCCCTTTGCCAGTCCCAAGCCTGGTGGATCTGCATCTCACGCCCACTGCACACCGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
3UTR GCA 90 bp GTTGTGCTGGTTTTACTTGGCTCAAGGGCTGCTGGGAAGGTTTGCTaGGACAAAGGCCTGCATGGCCTACAGAGAAACCCATCCATCCGC +
Preference number: 1 (lower is better)
Translates to: VVLVLLGSRAAGKVC*DKGLHGLQRNPSIR
Trigger: GCGGATGGATGGGTTTCTCTGTAGGCCATGCAGGCCTTTGTCGCAGCAAACCTTCCCAGCAGCCCTTGAGCCAAGTAAAACCAGCACAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
ENST00000545616.2
3UTR GCA 90 bp GAGCATTCTTGTGCTCTCCTCTCATGGCTGGAACTATCTGGGCTTTaGGCCCTGGTCCAGTGCTACGTATCAACCCCCTCAACATGCCTG +
Preference number: 1 (lower is better)
Translates to: EHSCALLSWLELSGL*ALVQCYVSTPSTCL
Trigger: CAGGCATGTTGAGGGGGTTGATACGTAGCACTGGACCAGGGCGCAAAGCCCAGATAGTTCCAGCCATGAGAGGAGAGCACAAGAATGCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
3UTR GCA 90 bp CCCTCATCTGGGCAAAGCAGACCCAAGGTGGTGCTGAGTGCAGAGTaGAGAGCATTCTTGTGCTCTCCTCTCATGGCTGGAACTATCTGG +
Preference number: 1 (lower is better)
Translates to: PSSGQSRPKVVLSAE*RAFLCSPLMAGTIW
Trigger: CCAGATAGTTCCAGCCATGAGAGGAGAGCACAAGAATGCTCTGCACTCTGCACTCAGCACCACCTTGGGTCTGCTTTGCCCAGATGAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
3UTR CCA 90 bp GTCCTAGGTAGAGAGCAGCCATACAGACACCACATGTGTTCCTCCTaGCTCCACACAGACGTCGTGTCCAGCAACAGTCTGATCCTTGCG +
Preference number: 1 (lower is better)
Translates to: VLGREQPYRHHMCSS*LHTDVVSSNSLILA
Trigger: CGCAAGGATCAGACTGTTGCTGGACACGACGTCTGTGTGGAGCCAGGAGGAACACATGTGGTGTCTGTATGGCTGCTCTCTACCTAGGAC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
ENST00000545616.2
3UTR CCA 90 bp CCTGCATGGCCTACAGAGAAACCCATCCATCCGCAGGTGGGGGTGTaGCTTGAAAGACCTGCTCTTAGTTCCCTTCTTTACCCTCCTGCT +
Preference number: 1 (lower is better)
Translates to: PAWPTEKPIHPQVGV*LERPALSSLLYPPA
Trigger: AGCAGGAGGGTAAAGAAGGGAACTAAGAGCAGGTCTTTCAAGCCACACCCCCACCTGCGGATGGATGGGTTTCTCTGTAGGCCATGCAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
ENST00000545616.2
3UTR CCA 90 bp CCACTGGTGGCTGGTTGTGCTGGTTTTACTTGGCTCAAGGGCTGCTaGGAAGGTTTGCTGCGACAAAGGCCTGCATGGCCTACAGAGAAA +
Preference number: 1 (lower is better)
Translates to: PLVAGCAGFTWLKGC*EGLLRQRPAWPTEK
Trigger: TTTCTCTGTAGGCCATGCAGGCCTTTGTCGCAGCAAACCTTCCCAGCAGCCCTTGAGCCAAGTAAAACCAGCACAACCAGCCACCAGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
ENST00000545616.2
3UTR CCA 90 bp AAAGGCATACAACATGAGCCTTGTGGGCACTGCCTCACCAACCACTaGTGGCTGGTTGTGCTGGTTTTACTTGGCTCAAGGGCTGCTGGG +
Preference number: 1 (lower is better)
Translates to: KGIQHEPCGHCLTNH*WLVVLVLLGSRAAG
Trigger: CCCAGCAGCCCTTGAGCCAAGTAAAACCAGCACAACCAGCCACCAGTGGTTGGTGAGGCAGTGCCCACAAGGCTCATGTTGTATGCCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
3UTR CCA 90 bp GAGTGCAGAGCATTCTTGTGCTCTCCTCTCATGGCTGGAACTATCTaGGCTTTGCGCCCTGGTCCAGTGCTACGTATCAACCCCCTCAAC +
Preference number: 1 (lower is better)
Translates to: ECRAFLCSPLMAGTI*ALRPGPVLRINPLN
Trigger: GTTGAGGGGGTTGATACGTAGCACTGGACCAGGGCGCAAAGCCCAGATAGTTCCAGCCATGAGAGGAGAGCACAAGAATGCTCTGCACTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
3UTR TCA 90 bp TTGTTAGTGGTCCCTCATCTGGGCAAAGCAGACCCAAGGTGGTGCTaGGTGCAGAGTGCAGAGCATTCTTGTGCTCTCCTCTCATGGCTG +
Preference number: 1 (lower is better)
Translates to: LLVVPHLGKADPRWC*VQSAEHSCALLSWL
Trigger: CAGCCATGAGAGGAGAGCACAAGAATGCTCTGCACTCTGCACTCAGCACCACCTTGGGTCTGCTTTGCCCAGATGAGGGACCACTAACAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
3UTR GCA 90 bp CAGGCTCATCCACTCCTCTTCTCTCGGCAGGGGGTAGTGTCAAAGTaGTTTGGTTGTCACAAGACCCAGACACCTAGGTTCCCAGTTTGG +
Preference number: 1 (lower is better)
Translates to: QAHPLLFSRQGVVSK*FGCHKTQTPRFPVW
Trigger: CCAAACTGGGAACCTAGGTGTCTGGGTCTTGTGACAACCAAAGCACTTTGACACTACCCCCTGCCGAGAGAAGAGGAGTGGATGAGCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
ENST00000545616.2
3UTR GCA 90 bp CTGGTTGTGCTGGTTTTACTTGGCTCAAGGGCTGCTGGGAAGGTTTaGTGCGACAAAGGCCTGCATGGCCTACAGAGAAACCCATCCATC +
Preference number: 1 (lower is better)
Translates to: LVVLVLLGSRAAGKV*CDKGLHGLQRNPSI
Trigger: GATGGATGGGTTTCTCTGTAGGCCATGCAGGCCTTTGTCGCAGCAAACCTTCCCAGCAGCCCTTGAGCCAAGTAAAACCAGCACAACCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
ENST00000545616.2
3UTR CCA 90 bp GACAAAGGCCTGCATGGCCTACAGAGAAACCCATCCATCCGCAGGTaGGGGTGTGGCTTGAAAGACCTGCTCTTAGTTCCCTTCTTTACC +
Preference number: 1 (lower is better)
Translates to: DKGLHGLQRNPSIRR*GCGLKDLLLVPFFT
Trigger: GGTAAAGAAGGGAACTAAGAGCAGGTCTTTCAAGCCACACCCCCACCTGCGGATGGATGGGTTTCTCTGTAGGCCATGCAGGCCTTTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
ENST00000545616.2
3UTR CCA 90 bp TACAACATGAGCCTTGTGGGCACTGCCTCACCAACCACTGGTGGCTaGTTGTGCTGGTTTTACTTGGCTCAAGGGCTGCTGGGAAGGTTT +
Preference number: 1 (lower is better)
Translates to: YNMSLVGTASPTTGG*LCWFYLAQGLLGRF
Trigger: AAACCTTCCCAGCAGCCCTTGAGCCAAGTAAAACCAGCACAACCAGCCACCAGTGGTTGGTGAGGCAGTGCCCACAAGGCTCATGTTGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
3UTR CCA 90 bp GCTGAGTGCAGAGTGCAGAGCATTCTTGTGCTCTCCTCTCATGGCTaGAACTATCTGGGCTTTGCGCCCTGGTCCAGTGCTACGTATCAA +
Preference number: 1 (lower is better)
Translates to: AECRVQSILVLSSHG*NYLGFAPWSSATYQ
Trigger: TTGATACGTAGCACTGGACCAGGGCGCAAAGCCCAGATAGTTCCAGCCATGAGAGGAGAGCACAAGAATGCTCTGCACTCTGCACTCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
3UTR CCA 90 bp AAGGCCTGTTTGTCTGTACAGCAATGCAGATGCGCAGGCCCATCCTaGTGGAGGACCCAGATGCAGGGAGCAAATATTCGGGTTGTGTTG +
Preference number: 1 (lower is better)
Translates to: KACLSVQQCRCAGPS*WRTQMQGANIRVVL
Trigger: CAACACAACCCGAATATTTGCTCCCTGCATCTGGGTCCTCCACCAGGATGGGCCTGCGCATCTGCATTGCTGTACAGACAAACAGGCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
3UTR CCA 90 bp CCAGCTAACCCCCACAAGAGGTGCCAGGGACGTTACTACAATCCCTaGGTGGTAGCTAAGGAAGCTAAGGAAGAGACTGAGAGGCTAACC +
Preference number: 1 (lower is better)
Translates to: PANPHKRCQGRYYNP*VVAKEAKEETERLT
Trigger: GGTTAGCCTCTCAGTCTCTTCCTTAGCTTCCTTAGCTACCACCCAGGGATTGTAGTAACGTCCCTGGCACCTCTTGTGGGGGTTAGCTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
3UTR TCA 90 bp CCTGGGCCTCAGGGAAAGCCCCTACAGCTCAGGAAGCTTTTTGGCTaGGGTTCTGTTCCTATCAATCATGATGGCAGAGGAGCCCATGTA +
Preference number: 1 (lower is better)
Translates to: PGPQGKPLQLRKLFG*GSVPINHDGRGAHV
Trigger: TACATGGGCTCCTCTGCCATCATGATTGATAGGAACAGAACCTCAGCCAAAAAGCTTCCTGAGCTGTAGGGGCTTTCCCTGAGGCCCAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
3UTR TCA 90 bp CACTGCTACTCAAAGCCAAGATGGCCTTATCAAAGGCATACAACATaGGCCTTGTGGGCACTGCCTCACCAACCACTGGTGGCTGGTTGT +
Preference number: 1 (lower is better)
Translates to: HCYSKPRWPYQRHTT*ALWALPHQPLVAGC
Trigger: ACAACCAGCCACCAGTGGTTGGTGAGGCAGTGCCCACAAGGCTCATGTTGTATGCCTTTGATAAGGCCATCTTGGCTTTGAGTAGCAGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
3UTR GCA 90 bp CAAGATGGCCTTATCAAAGGCATACAACATGAGCCTTGTGGGCACTaGCTCACCAACCACTGGTGGCTGGTTGTGCTGGTTTTACTTGGC +
Preference number: 1 (lower is better)
Translates to: QDGLIKGIQHEPCGH*LTNHWWLVVLVLLG
Trigger: GCCAAGTAAAACCAGCACAACCAGCCACCAGTGGTTGGTGAGGCAGTGCCCACAAGGCTCATGTTGTATGCCTTTGATAAGGCCATCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
3UTR CCA 90 bp CCCATAACAGAGGTGACATCTGTCCCAAGGCCATTCCATGGAAAATaGTGGCTGCTGGCAATTAGTGAGGCTAGTCCAGAAGCAAGCCTC +
Preference number: 1 (lower is better)
Translates to: PITEVTSVPRPFHGK*WLLAISEASPEASL
Trigger: GAGGCTTGCTTCTGGACTAGCCTCACTAATTGCCAGCAGCCACCATTTTCCATGGAATGGCCTTGGGACAGATGTCACCTCTGTTATGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
3UTR CCA 90 bp AAGTGCTTTGGTTGTCACAAGACCCAGACACCTAGGTTCCCAGTTTaGCTGGCCCAAGAGTTCTTCATGAGGCAAAAGAAGTGGCAGCTG +
Preference number: 1 (lower is better)
Translates to: KCFGCHKTQTPRFPV*LAQEFFMRQKKWQL
Trigger: CAGCTGCCACTTCTTTTGCCTCATGAAGAACTCTTGGGCCAGCCAAACTGGGAACCTAGGTGTCTGGGTCTTGTGACAACCAAAGCACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
ENST00000545616.2
3UTR GCA 90 bp TTCGGAAGTCCAAATACTGAGGCACACACCAACGGTGGACAGCCCTaGAGGAGCTTCCTGAAACTATCTACAATTCCAAGTGGATCACCA +
Preference number: 1 (lower is better)
Translates to: FGSPNTEAHTNGGQP*RSFLKLSTIPSGSP
Trigger: TGGTGATCCACTTGGAATTGTAGATAGTTTCAGGAAGCTCCTGCAGGGCTGTCCACCGTTGGTGTGTGCCTCAGTATTTGGACTTCCGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
3UTR GCA 90 bp ATACCTAGTGAGGAAACCCGAGGGCCAAACTACAAGACGAAAAAGTaGCCCGTTCCTGGCAATGATGTCAGAAGACCAAGAGGCGATAGT +
Preference number: 1 (lower is better)
Translates to: IPSEETRGPNYKTKK*PVPGNDVRRPRGDS
Trigger: ACTATCGCCTCTTGGTCTTCTGACATCATTGCCAGGAACGGGGCACTTTTTCGTCTTGTAGTTTGGCCCTCGGGTTTCCTCACTAGGTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
3UTR CCA 90 bp ATAACAGAGGTGACATCTGTCCCAAGGCCATTCCATGGAAAATGGTaGCTGCTGGCAATTAGTGAGGCTAGTCCAGAAGCAAGCCTCCTT +
Preference number: 1 (lower is better)
Translates to: ITEVTSVPRPFHGKW*LLAISEASPEASLL
Trigger: AAGGAGGCTTGCTTCTGGACTAGCCTCACTAATTGCCAGCAGCCACCATTTTCCATGGAATGGCCTTGGGACAGATGTCACCTCTGTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
3UTR CCA 90 bp TCCCAGCAACTCCTGAAGATAGATGCGGAAAGGGTGACTTTACCATaGGGTTCGAGTCTGAGCCAAGAGAGTTATAAAGGGGTCCCTAAC +
Preference number: 1 (lower is better)
Translates to: SQQLLKIDAERVTLP*GSSLSQESYKGVPN
Trigger: GTTAGGGACCCCTTTATAACTCTCTTGGCTCAGACTCGAACCCCATGGTAAAGTCACCCTTTCCGCATCTATCTTCAGGAGTTGCTGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
3UTR TCA 90 bp ATACTGAGGCACACACCAACGGTGGACAGCCCTGCAGGAGCTTCCTaGAACTATCTACAATTCCAAGTGGATCACCAGCTTCAGAATTAC +
Preference number: 1 (lower is better)
Translates to: ILRHTPTVDSPAGAS*NYLQFQVDHQLQNY
Trigger: GTAATTCTGAAGCTGGTGATCCACTTGGAATTGTAGATAGTTTCAGGAAGCTCCTGCAGGGCTGTCCACCGTTGGTGTGTGCCTCAGTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
3UTR TCA 90 bp AACAACAACGAAAAGTTGGGAGGGAAAGGGAGTAGCTCCATGAACTaGCGCTGGACATTCAGGCATATCCACATGAGACTCACTGTGCAC +
Preference number: 1 (lower is better)
Translates to: NNNEKLGGKGSSSMN*RWTFRHIHMRLTVH
Trigger: GTGCACAGTGAGTCTCATGTGGATATGCCTGAATGTCCAGCGTCAGTTCATGGAGCTACTCCCTTTCCCTCCCAACTTTTCGTTGTTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
3UTR GCA 90 bp GAGCATCCTGTCGCAGATAGAAAGTCAATCAGAAAAATCTGGTTGTaGTCTTGGATTAGCTGGGCATTTGGGGTAAGGGAGGGACTGCAG +
Preference number: 1 (lower is better)
Translates to: EHPVADRKSIRKIWL*SWISWAFGVREGLQ
Trigger: CTGCAGTCCCTCCCTTACCCCAAATGCCCAGCTAATCCAAGAGCACAACCAGATTTTTCTGATTGACTTTCTATCTGCGACAGGATGCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
3UTR GCA 90 bp CTGCCCCACAAAATAGAAGCCTTCAGTTGCTGCTGCTCAAACTCCTaGATCAAAGACACAAGAGCTTGCCTAAGTGACCACAACAGTTGC +
Preference number: 1 (lower is better)
Translates to: LPHKIEAFSCCCSNS*IKDTRACLSDHNSC
Trigger: GCAACTGTTGTGGTCACTTAGGCAAGCTCTTGTGTCTTTGATGCAGGAGTTTGAGCAGCAGCAACTGAAGGCTTCTATTTTGTGGGGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
3UTR CCA 90 bp GACGGGCCTTACTGGTGCATAGGAGAGGGAAATGATAAGAGGAAATaGCTTCTGACTAGGCCTTTCCAAGCGCATCTCATGTTTTCAGCT +
Preference number: 1 (lower is better)
Translates to: DGPYWCIGEGNDKRK*LLTRPFQAHLMFSA
Trigger: AGCTGAAAACATGAGATGCGCTTGGAAAGGCCTAGTCAGAAGCCATTTCCTCTTATCATTTCCCTCTCCTATGCACCAGTAAGGCCCGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
3UTR CCA 90 bp TCTATCTTTGAGCTGCTTAAGAAACACACAAAGGATACCAGCCAGTaGTCCAAGAGCAGACCAGAATCCCCACGCAGCTACACAGTAACA +
Preference number: 1 (lower is better)
Translates to: SIFELLKKHTKDTSQ*SKSRPESPRSYTVT
Trigger: TGTTACTGTGTAGCTGCGTGGGGATTCTGGTCTGCTCTTGGACCACTGGCTGGTATCCTTTGTGTGTTTCTTAAGCAGCTCAAAGATAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
3UTR CCA 90 bp CCTGTCGCAGATAGAAAGTCAATCAGAAAAATCTGGTTGTGCTCTTaGATTAGCTGGGCATTTGGGGTAAGGGAGGGACTGCAGATTCTG +
Preference number: 1 (lower is better)
Translates to: PVADRKSIRKIWLCS*ISWAFGVREGLQIL
Trigger: CAGAATCTGCAGTCCCTCCCTTACCCCAAATGCCCAGCTAATCCAAGAGCACAACCAGATTTTTCTGATTGACTTTCTATCTGCGACAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
3UTR CCA 90 bp ATCTCTGGAAGGATACCCAAGGAACAAACCAATAGTAGGTATTCATaGAGTGAGGAGCGGAGCTTGCTAGGCATCAGGAACTCAAGAAAG +
Preference number: 1 (lower is better)
Translates to: ISGRIPKEQTNSRYS*SEERSLLGIRNSRK
Trigger: CTTTCTTGAGTTCCTGATGCCTAGCAAGCTCCGCTCCTCACTCCATGAATACCTACTATTGGTTTGTTCCTTGGGTATCCTTCCAGAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
3UTR TCA 90 bp CCTTACAGTCACAGAAGTAAGGACTGGATGGTAAGCCAAAGGTGCTaGTGCTTGGTCAAAAAGTGGAGTACATCTTTGCATCTTGTAACA +
Preference number: 1 (lower is better)
Translates to: PYSHRSKDWMVSQRC*CLVKKWSTSLHLVT
Trigger: TGTTACAAGATGCAAAGATGTACTCCACTTTTTGACCAAGCATCAGCACCTTTGGCTTACCATCCAGTCCTTACTTCTGTGACTGTAAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
3UTR CCA 90 bp GATAGAAAGTCAATCAGAAAAATCTGGTTGTGCTCTTGGATTAGCTaGGCATTTGGGGTAAGGGAGGGACTGCAGATTCTGATTTGTACA +
Preference number: 1 (lower is better)
Translates to: DRKSIRKIWLCSWIS*AFGVREGLQILICT
Trigger: TGTACAAATCAGAATCTGCAGTCCCTCCCTTACCCCAAATGCCCAGCTAATCCAAGAGCACAACCAGATTTTTCTGATTGACTTTCTATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
3UTR CCA 90 bp TGCTTGGTCAAAAAGTGGAGTACATCTTTGCATCTTGTAACAATTTaGGCTCTACAGCTGAATTGGCAAAGTAAGGTTTACTACACAAGC +
Preference number: 1 (lower is better)
Translates to: CLVKKWSTSLHLVTI*ALQLNWQSKVYYTS
Trigger: GCTTGTGTAGTAAACCTTACTTTGCCAATTCAGCTGTAGAGCCCAAATTGTTACAAGATGCAAAGATGTACTCCACTTTTTGACCAAGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
3UTR CCA 90 bp AGTACATCTTTGCATCTTGTAACAATTTGGGCTCTACAGCTGAATTaGCAAAGTAAGGTTTACTACACAAGCCCCTCTTTTTCTTCTGAT +
Preference number: 1 (lower is better)
Translates to: STSLHLVTIWALQLN*QSKVYYTSPSFSSD
Trigger: ATCAGAAGAAAAAGAGGGGCTTGTGTAGTAAACCTTACTTTGCCAATTCAGCTGTAGAGCCCAAATTGTTACAAGATGCAAAGATGTACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
3UTR GCA 90 bp CAGTTATCAACTGGATATTTAGGCATGAATCTGGACATGTCCATCTaGTTAAGAAATCTGCTTAAGAAATCTGTAACAGCTACAGGAAAA +
Preference number: 1 (lower is better)
Translates to: QLSTGYLGMNLDMSI*LRNLLKKSVTATGK
Trigger: TTTTCCTGTAGCTGTTACAGATTTCTTAAGCAGATTTCTTAAGCAGATGGACATGTCCAGATTCATGCCTAAATATCCAGTTGATAACTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
3UTR-3UTR GCA 90 bp AGGAGGGGGAGAGGCCAAAGGGTCGGCATTCCCTTCATCCAGCCGGGCCAGAAGGAGCCTTGTGGGCACTaGCTCACCAACCACTGGTGG +
Preference number: 2 (lower is better)
Translates to: RRGRGQRVGIPFIQPGQKEPCGH*LTNHWW
Trigger: CCACCAGTGGTTGGTGAGGCAGTGCCCACAAGGCTC...CTTCTGGCCCGGCTGGATGAAGGGAATGCCGACCCTTTGGCCTCTCCCCCTCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
3UTR-3UTR CCA 90 bp AGGAGGGGGAGAGGCCAAAGGGTCGGCATTCCCTTCATCCAGCCGGGCCAGAAGCCATCCATCCGCAGGTaGGGGTGTGGCTTGAAAGAC +
Preference number: 2 (lower is better)
Translates to: RRGRGQRVGIPFIQPGQKPSIRR*GCGLKD
Trigger: GTCTTTCAAGCCACACCCCCACCTGCGGATGGATGG...CTTCTGGCCCGGCTGGATGAAGGGAATGCCGACCCTTTGGCCTCTCCCCCTCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
3UTR-3UTR CCA 90 bp GGATGTGGGCAGCCTCCTGGATCACTCAGGGACAGTGTGGACTCAGGGCCCACTCCGCAGGTGGGGGTGTaGCTTGAAAGACCTGCTCTT +
Preference number: 2 (lower is better)
Translates to: GCGQPPGSLRDSVDSGPTPQVGV*LERPAL
Trigger: AAGAGCAGGTCTTTCAAGCCACACCCCCACCTGCGG...AGTGGGCCCTGAGTCCACACTGTCCCTGAGTGATCCAGGAGGCTGCCCACATCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
3UTR-3UTR TCA 90 bp AGGAGGGGGAGAGGCCAAAGGGTCGGCATTCCCTTCATCCAGCCGGGCCAGAAGAGAGGAAATGGCTTCTaGCTAGGCCTTTCCAAGCGC +
Preference number: 2 (lower is better)
Translates to: RRGRGQRVGIPFIQPGQKRGNGF*LGLSKR
Trigger: GCGCTTGGAAAGGCCTAGTCAGAAGCCATTTCCTCT...CTTCTGGCCCGGCTGGATGAAGGGAATGCCGACCCTTTGGCCTCTCCCCCTCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
3UTR-3UTR TCA 90 bp GGCCTGCATGGCCTACAGAGAAACCCATCCATCCGCAGGTGGGGGTGTGGCTTGCTTTACCCTCCTGCTTaGCATGGAGATGAGGCTCCA +
Preference number: 2 (lower is better)
Translates to: GLHGLQRNPSIRRWGCGLLYPPA*HGDEAP
Trigger: TGGAGCCTCATCTCCATGTCAAGCAGGAGGGTAAAG...CAAGCCACACCCCCACCTGCGGATGGATGGGTTTCTCTGTAGGCCATGCAGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
ENST00000545616.2
3UTR-3UTR GCA 90 bp GGGCTTTGCGCCCTGGTCCAGTGCTACGTATCAACCCCCTCAACATGCCTGTGGGCTGCGACAAAGGCCTaGATGGCCTACAGAGAAACC +
Preference number: 2 (lower is better)
Translates to: GLCALVQCYVSTPSTCLWAATKA*MAYRET
Trigger: GGTTTCTCTGTAGGCCATGCAGGCCTTTGTCGCAGC...CCACAGGCATGTTGAGGGGGTTGATACGTAGCACTGGACCAGGGCGCAAAGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
3UTR-3UTR CCA 90 bp GGGCTTTGCGCCCTGGTCCAGTGCTACGTATCAACCCCCTCAACATGCCTGTGGTGCCTCACCAACCACTaGTGGCTGGTTGTGCTGGTT +
Preference number: 2 (lower is better)
Translates to: GLCALVQCYVSTPSTCLWCLTNH*WLVVLV
Trigger: AACCAGCACAACCAGCCACCAGTGGTTGGTGAGGCA...CCACAGGCATGTTGAGGGGGTTGATACGTAGCACTGGACCAGGGCGCAAAGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
3UTR-3UTR CCA 90 bp GCTGAGAAGGTTGTTAGTGGTCCCTCATCTGGGCAAAGCAGACCCAAGGTGGTGCAGGCGCTCCTAAGATaGAGGGAGGCGGAGAGCAGG +
Preference number: 2 (lower is better)
Translates to: AEKVVSGPSSGQSRPKVVQALLR*REAESR
Trigger: CCTGCTCTCCGCCTCCCTCCATCTTAGGAGCGCCTG...CACCACCTTGGGTCTGCTTTGCCCAGATGAGGGACCACTAACAACCTTCTCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
3UTR-3UTR GCA 90 bp GCTGAGAAGGTTGTTAGTGGTCCCTCATCTGGGCAAAGCAGACCCAAGGTGGTGGAGCCTTGTGGGCACTaGCTCACCAACCACTGGTGG +
Preference number: 2 (lower is better)
Translates to: AEKVVSGPSSGQSRPKVVEPCGH*LTNHWW
Trigger: CCACCAGTGGTTGGTGAGGCAGTGCCCACAAGGCTC...CACCACCTTGGGTCTGCTTTGCCCAGATGAGGGACCACTAACAACCTTCTCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
3UTR-3UTR CCA 90 bp GGATGTGGGCAGCCTCCTGGATCACTCAGGGACAGTGTGGACTCAGGGCCCACTCTCACCAACCACTGGTaGCTGGTTGTGCTGGTTTTA +
Preference number: 2 (lower is better)
Translates to: GCGQPPGSLRDSVDSGPTLTNHW*LVVLVL
Trigger: TAAAACCAGCACAACCAGCCACCAGTGGTTGGTGAG...AGTGGGCCCTGAGTCCACACTGTCCCTGAGTGATCCAGGAGGCTGCCCACATCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
3UTR-3UTR CCA 90 bp ATGTCAGAAGACCAAGAGGCGATAGTTACCAGCAACACTCTAGGAAGACCAGCTCCCCGACCGGGGGCCTaGGAGGGAAGGGCAGATGGA +
Preference number: 2 (lower is better)
Translates to: MSEDQEAIVTSNTLGRPAPRPGA*EGRADG
Trigger: TCCATCTGCCCTTCCCTCCCAGGCCCCCGGTCGGGG...AGCTGGTCTTCCTAGAGTGTTGCTGGTAACTATCGCCTCTTGGTCTTCTGACAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
3UTR-3UTR CCA 90 bp CTGCATGGCCTACAGAGAAACCCATCCATCCGCAGGTGGGGGTGTGGCTTGAAACACATGTGTTCCTCCTaGCTCCACACAGACGTCGTG +
Preference number: 2 (lower is better)
Translates to: LHGLQRNPSIRRWGCGLKHMCSS*LHTDVV
Trigger: CACGACGTCTGTGTGGAGCCAGGAGGAACACATGTG...TTTCAAGCCACACCCCCACCTGCGGATGGATGGGTTTCTCTGTAGGCCATGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
ENST00000545616.2
3UTR-3UTR CCA 90 bp GCTGGGAAGGTTTGCTGCGACAAAGGCCTGCATGGCCTACAGAGAAACCCATCCCACATGTGTTCCTCCTaGCTCCACACAGACGTCGTG +
Preference number: 2 (lower is better)
Translates to: AGKVCCDKGLHGLQRNPSHMCSS*LHTDVV
Trigger: CACGACGTCTGTGTGGAGCCAGGAGGAACACATGTG...GGATGGGTTTCTCTGTAGGCCATGCAGGCCTTTGTCGCAGCAAACCTTCCCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
ENST00000545616.2
3UTR-3UTR CCA 90 bp GGGCTTTGCGCCCTGGTCCAGTGCTACGTATCAACCCCCTCAACATGCCTGTGGTGTGCTGGTTTTACTTaGCTCAAGGGCTGCTGGGAA +
Preference number: 2 (lower is better)
Translates to: GLCALVQCYVSTPSTCLWCAGFT*LKGCWE
Trigger: TTCCCAGCAGCCCTTGAGCCAAGTAAAACCAGCACA...CCACAGGCATGTTGAGGGGGTTGATACGTAGCACTGGACCAGGGCGCAAAGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
3UTR CAA 90 bp AACATGAGCCTTGTGGGCACTGCCTCACCAACCACTGGTGGCTGGTaGTGCTGGTTTTACTTGGCTCAAGGGCTGCTGGGAAGGTTTGCT +
Preference number: 2 (lower is better)
Translates to: NMSLVGTASPTTGGW*CWFYLAQGLLGRFA
Trigger: AGCAAACCTTCCCAGCAGCCCTTGAGCCAAGTAAAACCAGCACAACCAGCCACCAGTGGTTGGTGAGGCAGTGCCCACAAGGCTCATGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
3UTR CAA 90 bp CAAAGCAGACCCAAGGTGGTGCTGAGTGCAGAGTGCAGAGCATTCTaGTGCTCTCCTCTCATGGCTGGAACTATCTGGGCTTTGCGCCCT +
Preference number: 2 (lower is better)
Translates to: QSRPKVVLSAECRAF*CSPLMAGTIWALRP
Trigger: AGGGCGCAAAGCCCAGATAGTTCCAGCCATGAGAGGAGAGCACAAGAATGCTCTGCACTCTGCACTCAGCACCACCTTGGGTCTGCTTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
3UTR-3UTR TCA 90 bp GCTGGGAAGGTTTGCTGCGACAAAGGCCTGCATGGCCTACAGAGAAACCCATCCTGCTTGACATGGAGATaGGGCTCCAGGAGAGAGAGT +
Preference number: 2 (lower is better)
Translates to: AGKVCCDKGLHGLQRNPSCLTWR*GSRRES
Trigger: ACTCTCTCTCCTGGAGCCTCATCTCCATGTCAAGCA...GGATGGGTTTCTCTGTAGGCCATGCAGGCCTTTGTCGCAGCAAACCTTCCCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
ENST00000545616.2
3UTR-3UTR TCA 90 bp GCTGGGAAGGTTTGCTGCGACAAAGGCCTGCATGGCCTACAGAGAAACCCATCCCTTTACCCTCCTGCTTaGCATGGAGATGAGGCTCCA +
Preference number: 2 (lower is better)
Translates to: AGKVCCDKGLHGLQRNPSLYPPA*HGDEAP
Trigger: TGGAGCCTCATCTCCATGTCAAGCAGGAGGGTAAAG...GGATGGGTTTCTCTGTAGGCCATGCAGGCCTTTGTCGCAGCAAACCTTCCCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
ENST00000545616.2
3UTR-3UTR CCA 90 bp GAGGCACACACCAACGGTGGACAGCCCTGCAGGAGCTTCCTGAAACTATCTACACACATGTGTTCCTCCTaGCTCCACACAGACGTCGTG +
Preference number: 2 (lower is better)
Translates to: EAHTNGGQPCRSFLKLSTHMCSS*LHTDVV
Trigger: CACGACGTCTGTGTGGAGCCAGGAGGAACACATGTG...TGTAGATAGTTTCAGGAAGCTCCTGCAGGGCTGTCCACCGTTGGTGTGTGCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
3UTR-3UTR CCA 90 bp GCATGGCCTACAGAGAAACCCATCCATCCGCAGGTGGGGGTGTGGCTTGAAAGACCTAGGTTCCCAGTTTaGCTGGCCCAAGAGTTCTTC +
Preference number: 2 (lower is better)
Translates to: AWPTEKPIHPQVGVWLERPRFPV*LAQEFF
Trigger: GAAGAACTCTTGGGCCAGCCAAACTGGGAACCTAGG...TCTTTCAAGCCACACCCCCACCTGCGGATGGATGGGTTTCTCTGTAGGCCATGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
ENST00000545616.2
3UTR-3UTR CCA 90 bp AAGGCATACAACATGAGCCTTGTGGGCACTGCCTCACCAACCACTGGTGGCTGGCGACAAAGGCCTGCATaGCCTACAGAGAAACCCATC +
Preference number: 2 (lower is better)
Translates to: KAYNMSLVGTASPTTGGWRQRPA*PTEKPI
Trigger: GATGGGTTTCTCTGTAGGCCATGCAGGCCTTTGTCG...CCAGCCACCAGTGGTTGGTGAGGCAGTGCCCACAAGGCTCATGTTGTATGCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
3UTR-3UTR CCA 90 bp GCTGAGAAGGTTGTTAGTGGTCCCTCATCTGGGCAAAGCAGACCCAAGGTGGTGCTGGGCTTTGCGCCCTaGTCCAGTGCTACGTATCAA +
Preference number: 2 (lower is better)
Translates to: AEKVVSGPSSGQSRPKVVLGFAP*SSATYQ
Trigger: TTGATACGTAGCACTGGACCAGGGCGCAAAGCCCAG...CACCACCTTGGGTCTGCTTTGCCCAGATGAGGGACCACTAACAACCTTCTCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
3UTR-3UTR CCA 90 bp AAAAGTGCCCCGTTCCTGGCAATGATGTCAGAAGACCAAGAGGCGATAGTTACCATCCAGGGGAGGATCTaGGCTGCTGCTGTAGGGGGC +
Preference number: 2 (lower is better)
Translates to: KSAPFLAMMSEDQEAIVTIQGRI*AAAVGG
Trigger: GCCCCCTACAGCAGCAGCCCAGATCCTCCCCTGGAT...GGTAACTATCGCCTCTTGGTCTTCTGACATCATTGCCAGGAACGGGGCACTTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
3UTR CAA 90 bp CATGGCCTACAGAGAAACCCATCCATCCGCAGGTGGGGGTGTGGCTaGAAAGACCTGCTCTTAGTTCCCTTCTTTACCCTCCTGCTTGAC +
Preference number: 2 (lower is better)
Translates to: HGLQRNPSIRRWGCG*KDLLLVPFFTLLLD
Trigger: GTCAAGCAGGAGGGTAAAGAAGGGAACTAAGAGCAGGTCTTTCAAGCCACACCCCCACCTGCGGATGGATGGGTTTCTCTGTAGGCCATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
ENST00000545616.2
3UTR CAA 90 bp GCTGGTTGTGCTGGTTTTACTTGGCTCAAGGGCTGCTGGGAAGGTTaGCTGCGACAAAGGCCTGCATGGCCTACAGAGAAACCCATCCAT +
Preference number: 2 (lower is better)
Translates to: AGCAGFTWLKGCWEG*LRQRPAWPTEKPIH
Trigger: ATGGATGGGTTTCTCTGTAGGCCATGCAGGCCTTTGTCGCAGCAAACCTTCCCAGCAGCCCTTGAGCCAAGTAAAACCAGCACAACCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
ENST00000545616.2
3UTR CAA 90 bp AGAGCATTCTTGTGCTCTCCTCTCATGGCTGGAACTATCTGGGCTTaGCGCCCTGGTCCAGTGCTACGTATCAACCCCCTCAACATGCCT +
Preference number: 2 (lower is better)
Translates to: RAFLCSPLMAGTIWA*RPGPVLRINPLNMP
Trigger: AGGCATGTTGAGGGGGTTGATACGTAGCACTGGACCAGGGCGCAAAGCCCAGATAGTTCCAGCCATGAGAGGAGAGCACAAGAATGCTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
3UTR CAA 90 bp GTGAACCTGGGCCTCAGGGAAAGCCCCTACAGCTCAGGAAGCTTTTaGGCTGAGGTTCTGTTCCTATCAATCATGATGGCAGAGGAGCCC +
Preference number: 2 (lower is better)
Translates to: VNLGLRESPYSSGSF*AEVLFLSIMMAEEP
Trigger: GGGCTCCTCTGCCATCATGATTGATAGGAACAGAACCTCAGCCAAAAAGCTTCCTGAGCTGTAGGGGCTTTCCCTGAGGCCCAGGTTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
3UTR-3UTR TCA 90 bp GAGGCACACACCAACGGTGGACAGCCCTGCAGGAGCTTCCTGAAACTATCTACACAAAGGCATACAACATaGGCCTTGTGGGCACTGCCT +
Preference number: 2 (lower is better)
Translates to: EAHTNGGQPCRSFLKLSTQRHTT*ALWALP
Trigger: AGGCAGTGCCCACAAGGCTCATGTTGTATGCCTTTG...TGTAGATAGTTTCAGGAAGCTCCTGCAGGGCTGTCCACCGTTGGTGTGTGCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
3UTR-3UTR TCA 90 bp ATGTCAGAAGACCAAGAGGCGATAGTTACCAGCAACACTCTAGGAAGACCAGCTACAGTGGCTCCCTTCTaGGGCAGTGGCAGTGGGCTC +
Preference number: 2 (lower is better)
Translates to: MSEDQEAIVTSNTLGRPATVAPF*GSGSGL
Trigger: GAGCCCACTGCCACTGCCTCAGAAGGGAGCCACTGT...AGCTGGTCTTCCTAGAGTGTTGCTGGTAACTATCGCCTCTTGGTCTTCTGACAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
3UTR-3UTR CCA 90 bp GCTGAGAAGGTTGTTAGTGGTCCCTCATCTGGGCAAAGCAGACCCAAGGTGGTGATCCTGAGGGGGAAATaGGTGACGAGGAACACTGCT +
Preference number: 2 (lower is better)
Translates to: AEKVVSGPSSGQSRPKVVILRGK*VTRNTA
Trigger: AGCAGTGTTCCTCGTCACCCATTTCCCCCTCAGGAT...CACCACCTTGGGTCTGCTTTGCCCAGATGAGGGACCACTAACAACCTTCTCAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
3UTR-3UTR CCA 90 bp GAGGCACACACCAACGGTGGACAGCCCTGCAGGAGCTTCCTGAAACTATCTACAGCCGGGCCAGAAGTATaGGCCATTCTCAAAAAGCCA +
Preference number: 2 (lower is better)
Translates to: EAHTNGGQPCRSFLKLSTAGPEV*AILKKP
Trigger: TGGCTTTTTGAGAATGGCCCATACTTCTGGCCCGGC...TGTAGATAGTTTCAGGAAGCTCCTGCAGGGCTGTCCACCGTTGGTGTGTGCCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
3UTR-3UTR CCA 90 bp ACCAGCTGTCACCAGAAGGGAGTTCCTAACACTTGCCACACCTGCTCCCCCGACATCTGGTTGTGCTCTTaGATTAGCTGGGCATTTGGG +
Preference number: 2 (lower is better)
Translates to: TSCHQKGVPNTCHTCSPDIWLCS*ISWAFG
Trigger: CCCAAATGCCCAGCTAATCCAAGAGCACAACCAGAT...GTCGGGGGAGCAGGTGTGGCAAGTGTTAGGAACTCCCTTCTGGTGACAGCTGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
3UTR CAA 90 bp GTACCCCTAGCAACTACTAATGGTTCAGCCACCCGTGGAGTCCAGTaGGGGCTGAGTTATGCTCCACTAACCCATAGCAGACCAGCAACA +
Preference number: 2 (lower is better)
Translates to: VPLATTNGSATRGVQ*GLSYAPLTHSRPAT
Trigger: TGTTGCTGGTCTGCTATGGGTTAGTGGAGCATAACTCAGCCCCAACTGGACTCCACGGGTGGCTGAACCATTAGTAGTTGCTAGGGGTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
3UTR-3UTR TCA 90 bp GCAGGAACTACTGCTAGTGATACTAGGCTTGCTGCAGGAGGATGTCACGCTGAGCCTCATGAAGTTTCTTaGGGCAAACCCGCAGGCTCA +
Preference number: 2 (lower is better)
Translates to: AGTTASDTRLAAGGCHAEPHEVS*GKPAGS
Trigger: TGAGCCTGCGGGTTTGCCTCAAGAAACTTCATGAGG...CTCAGCGTGACATCCTCCTGCAGCAAGCCTAGTATCACTAGCAGTAGTTCCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
3UTR-3UTR TCA 90 bp AGAAACCCATCCATCCGCAGGTGGGGGTGTGGCTTGAAAGACCTGCTCTTAGTTTGCTTGACATGGAGATaGGGCTCCAGGAGAGAGAGT +
Preference number: 2 (lower is better)
Translates to: RNPSIRRWGCGLKDLLLVCLTWR*GSRRES
Trigger: ACTCTCTCTCCTGGAGCCTCATCTCCATGTCAAGCA...AACTAAGAGCAGGTCTTTCAAGCCACACCCCCACCTGCGGATGGATGGGTTTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
ENST00000545616.2
3UTR-3UTR GCA 90 bp AAGGCATACAACATGAGCCTTGTGGGCACTGCCTCACCAACCACTGGTGGCTGGGGGGTAGTGTCAAAGTaGTTTGGTTGTCACAAGACC +
Preference number: 2 (lower is better)
Translates to: KAYNMSLVGTASPTTGGWGVVSK*FGCHKT
Trigger: GGTCTTGTGACAACCAAAGCACTTTGACACTACCCC...CCAGCCACCAGTGGTTGGTGAGGCAGTGCCCACAAGGCTCATGTTGTATGCCTT
53% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
3UTR-3UTR GCA 90 bp ATGATCTCTGGAAGGATACCCAAGGAACAAACCAATAGTAGGTATTCATGGAGTTCAGGGCCCACTCCCTaGTGGGGCTCTGGACGGGCC +
Preference number: 2 (lower is better)
Translates to: MISGRIPKEQTNSRYSWSSGPTP*WGSGRA
Trigger: GGCCCGTCCAGAGCCCCAGCAGGGAGTGGGCCCTGA...ACTCCATGAATACCTACTATTGGTTTGTTCCTTGGGTATCCTTCCAGAGATCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
3UTR-3UTR GCA 90 bp GGGCCAAACTACAAGACGAAAAAGTGCCCCGTTCCTGGCAATGATGTCAGAAGATTGCCCAGGCTGGAGTaGAGTGGGGATCTTGGCTCA +
Preference number: 2 (lower is better)
Translates to: GPNYKTKKCPVPGNDVRRLPRLE*SGDLGS
Trigger: TGAGCCAAGATCCCCACTGCACTCCAGCCTGGGCAA...TCTTCTGACATCATTGCCAGGAACGGGGCACTTTTTCGTCTTGTAGTTTGGCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
3UTR-3UTR CCA 90 bp AGAAACCCATCCATCCGCAGGTGGGGGTGTGGCTTGAAAGACCTGCTCTTAGTTCCTAGGTTCCCAGTTTaGCTGGCCCAAGAGTTCTTC +
Preference number: 2 (lower is better)
Translates to: RNPSIRRWGCGLKDLLLVPRFPV*LAQEFF
Trigger: GAAGAACTCTTGGGCCAGCCAAACTGGGAACCTAGG...AACTAAGAGCAGGTCTTTCAAGCCACACCCCCACCTGCGGATGGATGGGTTTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
ENST00000545616.2
3UTR-3UTR CCA 90 bp GGCCTACAGAGAAACCCATCCATCCGCAGGTGGGGGTGTGGCTTGAAAGACCTGAGTGTCAAAGTGCTTTaGTTGTCACAAGACCCAGAC +
Preference number: 2 (lower is better)
Translates to: GLQRNPSIRRWGCGLKDLSVKVL*LSQDPD
Trigger: GTCTGGGTCTTGTGACAACCAAAGCACTTTGACACT...CAGGTCTTTCAAGCCACACCCCCACCTGCGGATGGATGGGTTTCTCTGTAGGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
ENST00000545616.2
3UTR-3UTR CCA 90 bp GCAGGAACTACTGCTAGTGATACTAGGCTTGCTGCAGGAGGATGTCACGCTGAGCGACAAAGGCCTGCATaGCCTACAGAGAAACCCATC +
Preference number: 2 (lower is better)
Translates to: AGTTASDTRLAAGGCHAERQRPA*PTEKPI
Trigger: GATGGGTTTCTCTGTAGGCCATGCAGGCCTTTGTCG...CTCAGCGTGACATCCTCCTGCAGCAAGCCTAGTATCACTAGCAGTAGTTCCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
3UTR-3UTR CCA 90 bp GAGGCACACACCAACGGTGGACAGCCCTGCAGGAGCTTCCTGAAACTATCTACAAAAGCCACTGCTCTTTaGAGCCACTCGAGAGGTTCA +
Preference number: 2 (lower is better)
Translates to: EAHTNGGQPCRSFLKLSTKATAL*SHSRGS
Trigger: TGAACCTCTCGAGTGGCTCCAAAGAGCAGTGGCTTT...TGTAGATAGTTTCAGGAAGCTCCTGCAGGGCTGTCCACCGTTGGTGTGTGCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
3UTR-3UTR CCA 90 bp GCACTGGGGAAAAGGATCTTCTTGTCAAGAACAGGGTATCCGGCAATGGTGGGACTGGGCTTTGCGCCCTaGTCCAGTGCTACGTATCAA +
Preference number: 2 (lower is better)
Translates to: ALGKRIFLSRTGYPAMVGLGFAP*SSATYQ
Trigger: TTGATACGTAGCACTGGACCAGGGCGCAAAGCCCAG...TCCCACCATTGCCGGATACCCTGTTCTTGACAAGAAGATCCTTTTCCCCAGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
3UTR-3UTR CCA 90 bp AAAAGTGCCCCGTTCCTGGCAATGATGTCAGAAGACCAAGAGGCGATAGTTACCCAGATCCACCAGGCTTaGGACTGGCAAAGGGAGCTG +
Preference number: 2 (lower is better)
Translates to: KSAPFLAMMSEDQEAIVTQIHQA*DWQREL
Trigger: CAGCTCCCTTTGCCAGTCCCAAGCCTGGTGGATCTG...GGTAACTATCGCCTCTTGGTCTTCTGACATCATTGCCAGGAACGGGGCACTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
3UTR-3UTR TCA 90 bp GGGTGTGGCTTGAAAGACCTGCTCTTAGTTCCCTTCTTTACCCTCCTGCTTGACCCTCATGAAGTTTCTTaGGGCAAACCCGCAGGCTCA +
Preference number: 2 (lower is better)
Translates to: GCGLKDLLLVPFFTLLLDPHEVS*GKPAGS
Trigger: TGAGCCTGCGGGTTTGCCTCAAGAAACTTCATGAGG...GTCAAGCAGGAGGGTAAAGAAGGGAACTAAGAGCAGGTCTTTCAAGCCACACCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
ENST00000545616.2
3UTR-3UTR GCA 90 bp AAAAGTGCCCCGTTCCTGGCAATGATGTCAGAAGACCAAGAGGCGATAGTTACCACACTGGAACCACAGTaGACATGTGGGGATGTGGGC +
Preference number: 2 (lower is better)
Translates to: KSAPFLAMMSEDQEAIVTTLEPQ*TCGDVG
Trigger: GCCCACATCCCCACATGTGCACTGTGGTTCCAGTGT...GGTAACTATCGCCTCTTGGTCTTCTGACATCATTGCCAGGAACGGGGCACTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
3UTR-3UTR CCA 90 bp GCAGGAACTACTGCTAGTGATACTAGGCTTGCTGCAGGAGGATGTCACGCTGAGTGTGCTCTCCTCTCATaGCTGGAACTATCTGGGCTT +
Preference number: 2 (lower is better)
Translates to: AGTTASDTRLAAGGCHAECALLS*LELSGL
Trigger: AAGCCCAGATAGTTCCAGCCATGAGAGGAGAGCACA...CTCAGCGTGACATCCTCCTGCAGCAAGCCTAGTATCACTAGCAGTAGTTCCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
3UTR CAA 90 bp GCTGGGAGAGGCCTGTGCCACTGCTGTCAGCTACAGAGCCTGATCTaGAGCATCCTGTCGCAGATAGAAAGTCAATCAGAAAAATCTGGT +
Preference number: 2 (lower is better)
Translates to: AGRGLCHCCQLQSLI*SILSQIESQSEKSG
Trigger: ACCAGATTTTTCTGATTGACTTTCTATCTGCGACAGGATGCTCAAGATCAGGCTCTGTAGCTGACAGCAGTGGCACAGGCCTCTCCCAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
3UTR-3UTR TCA 90 bp GGGCCAAACTACAAGACGAAAAAGTGCCCCGTTCCTGGCAATGATGTCAGAAGAACTGGCAAAGGGAGCTaGGAAGAGAGTTCCCCCAAA +
Preference number: 2 (lower is better)
Translates to: GPNYKTKKCPVPGNDVRRTGKGS*EESSPK
Trigger: TTTGGGGGAACTCTCTTCTCAGCTCCCTTTGCCAGT...TCTTCTGACATCATTGCCAGGAACGGGGCACTTTTTCGTCTTGTAGTTTGGCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
3UTR-3UTR GCA 90 bp AGAAACCCATCCATCCGCAGGTGGGGGTGTGGCTTGAAAGACCTGCTCTTAGTTGGGGTAGTGTCAAAGTaGTTTGGTTGTCACAAGACC +
Preference number: 2 (lower is better)
Translates to: RNPSIRRWGCGLKDLLLVGVVSK*FGCHKT
Trigger: GGTCTTGTGACAACCAAAGCACTTTGACACTACCCC...AACTAAGAGCAGGTCTTTCAAGCCACACCCCCACCTGCGGATGGATGGGTTTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
ENST00000545616.2
3UTR-3UTR GCA 90 bp ATGTCAGAAGACCAAGAGGCGATAGTTACCAGCAACACTCTAGGAAGACCAGCTGCTGCTGGGAAGGTTTaGTGCGACAAAGGCCTGCAT +
Preference number: 2 (lower is better)
Translates to: MSEDQEAIVTSNTLGRPAAAGKV*CDKGLH
Trigger: ATGCAGGCCTTTGTCGCAGCAAACCTTCCCAGCAGC...AGCTGGTCTTCCTAGAGTGTTGCTGGTAACTATCGCCTCTTGGTCTTCTGACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
3UTR-3UTR GCA 90 bp ATGTCAGAAGACCAAGAGGCGATAGTTACCAGCAACACTCTAGGAAGACCAGCTGGTGGAGGACCCAGATaGAGGGAGCAAATATTCGGG +
Preference number: 2 (lower is better)
Translates to: MSEDQEAIVTSNTLGRPAGGGPR*REQIFG
Trigger: CCCGAATATTTGCTCCCTGCATCTGGGTCCTCCACC...AGCTGGTCTTCCTAGAGTGTTGCTGGTAACTATCGCCTCTTGGTCTTCTGACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
3UTR-3UTR CCA 90 bp TCAGTTGTACCCCTAGCAACTACTAATGGTTCAGCCACCCGTGGAGTCCAGTTGCCAACCACTGGTGGCTaGTTGTGCTGGTTTTACTTG +
Preference number: 2 (lower is better)
Translates to: SVVPLATTNGSATRGVQLPTTGG*LCWFYL
Trigger: CAAGTAAAACCAGCACAACCAGCCACCAGTGGTTGG...CAACTGGACTCCACGGGTGGCTGAACCATTAGTAGTTGCTAGGGGTACAACTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
3UTR-3UTR CCA 90 bp AAAAGTGCCCCGTTCCTGGCAATGATGTCAGAAGACCAAGAGGCGATAGTTACCCTGGACGGGCCTTACTaGTGCATAGGAGAGGGAAAT +
Preference number: 2 (lower is better)
Translates to: KSAPFLAMMSEDQEAIVTLDGPY*CIGEGN
Trigger: ATTTCCCTCTCCTATGCACCAGTAAGGCCCGTCCAG...GGTAACTATCGCCTCTTGGTCTTCTGACATCATTGCCAGGAACGGGGCACTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
3UTR-3UTR GCA 90 bp GCAGGAACTACTGCTAGTGATACTAGGCTTGCTGCAGGAGGATGTCACGCTGAGATGGAAAATGGTGGCTaGTGGCAATTAGTGAGGCTA +
Preference number: 2 (lower is better)
Translates to: AGTTASDTRLAAGGCHAEMENGG*WQLVRL
Trigger: TAGCCTCACTAATTGCCAGCAGCCACCATTTTCCAT...CTCAGCGTGACATCCTCCTGCAGCAAGCCTAGTATCACTAGCAGTAGTTCCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
3UTR-3UTR GCA 90 bp GGGCCAAACTACAAGACGAAAAAGTGCCCCGTTCCTGGCAATGATGTCAGAAGAGTGCTGAGTGCAGAGTaGAGAGCATTCTTGTGCTCT +
Preference number: 2 (lower is better)
Translates to: GPNYKTKKCPVPGNDVRRVLSAE*RAFLCS
Trigger: AGAGCACAAGAATGCTCTGCACTCTGCACTCAGCAC...TCTTCTGACATCATTGCCAGGAACGGGGCACTTTTTCGTCTTGTAGTTTGGCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
3UTR-3UTR GCA 90 bp AAAAGTGCCCCGTTCCTGGCAATGATGTCAGAAGACCAAGAGGCGATAGTTACCGAGCTCTGGGTATACTaGCCTGGATGTATCAGGATG +
Preference number: 2 (lower is better)
Translates to: KSAPFLAMMSEDQEAIVTELWVY*PGCIRM
Trigger: CATCCTGATACATCCAGGGCAGTATACCCAGAGCTC...GGTAACTATCGCCTCTTGGTCTTCTGACATCATTGCCAGGAACGGGGCACTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
3UTR-3UTR GCA 90 bp GGGCCAAACTACAAGACGAAAAAGTGCCCCGTTCCTGGCAATGATGTCAGAAGAAGTGACCACAACAGTTaGAGCCACACATCACCACTG +
Preference number: 2 (lower is better)
Translates to: GPNYKTKKCPVPGNDVRRSDHNS*SHTSPL
Trigger: CAGTGGTGATGTGTGGCTGCAACTGTTGTGGTCACT...TCTTCTGACATCATTGCCAGGAACGGGGCACTTTTTCGTCTTGTAGTTTGGCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
3UTR-3UTR CCA 90 bp ACTGGTGGCTGGTTGTGCTGGTTTTACTTGGCTCAAGGGCTGCTGGGAAGGTTTAGTGTCAAAGTGCTTTaGTTGTCACAAGACCCAGAC +
Preference number: 2 (lower is better)
Translates to: TGGWLCWFYLAQGLLGRFSVKVL*LSQDPD
Trigger: GTCTGGGTCTTGTGACAACCAAAGCACTTTGACACT...AAACCTTCCCAGCAGCCCTTGAGCCAAGTAAAACCAGCACAACCAGCCACCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
ENST00000545616.2
3UTR-3UTR CCA 90 bp TCAGTTGTACCCCTAGCAACTACTAATGGTTCAGCCACCCGTGGAGTCCAGTTGGAAAATGGTGGCTGCTaGCAATTAGTGAGGCTAGTC +
Preference number: 2 (lower is better)
Translates to: SVVPLATTNGSATRGVQLENGGC*QLVRLV
Trigger: GACTAGCCTCACTAATTGCCAGCAGCCACCATTTTC...CAACTGGACTCCACGGGTGGCTGAACCATTAGTAGTTGCTAGGGGTACAACTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
3UTR-3UTR CCA 90 bp AAAAGTGCCCCGTTCCTGGCAATGATGTCAGAAGACCAAGAGGCGATAGTTACCCAAGGGGCTTGGCACTaGGGAAAAGGATCTTCTTGT +
Preference number: 2 (lower is better)
Translates to: KSAPFLAMMSEDQEAIVTQGAWH*GKGSSC
Trigger: ACAAGAAGATCCTTTTCCCCAGTGCCAAGCCCCTTG...GGTAACTATCGCCTCTTGGTCTTCTGACATCATTGCCAGGAACGGGGCACTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
3UTR-3UTR CCA 90 bp CATTCTCCATGTCACGCAGACTGTATTCCTAATGAAAAACTTCCCCCACTCACATGGCTCAAGGGCTGCTaGGAAGGTTTGCTGCGACAA +
Preference number: 2 (lower is better)
Translates to: HSPCHADCIPNEKLPPLTWLKGC*EGLLRQ
Trigger: TTGTCGCAGCAAACCTTCCCAGCAGCCCTTGAGCCA...TGTGAGTGGGGGAAGTTTTTCATTAGGAATACAGTCTGCGTGACATGGAGAATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
3UTR-3UTR CCA 90 bp ATGGAAATTTTCCTCCTCATGCCCAGCCATCTGAACCAAGGACAGGTTCCTTCTTGTGCTGGTTTTACTTaGCTCAAGGGCTGCTGGGAA +
Preference number: 2 (lower is better)
Translates to: MEIFLLMPSHLNQGQVPSCAGFT*LKGCWE
Trigger: TTCCCAGCAGCCCTTGAGCCAAGTAAAACCAGCACA...AGAAGGAACCTGTCCTTGGTTCAGATGGCTGGGCATGAGGAGGAAAATTTCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
3UTR-3UTR GCA 90 bp TTCTTTACCCTCCTGCTTGACATGGAGATGAGGCTCCAGGAGAGAGAGTGTAATGGGGTAGTGTCAAAGTaGTTTGGTTGTCACAAGACC +
Preference number: 2 (lower is better)
Translates to: FFTLLLDMEMRLQERECNGVVSK*FGCHKT
Trigger: GGTCTTGTGACAACCAAAGCACTTTGACACTACCCC...ATTACACTCTCTCTCCTGGAGCCTCATCTCCATGTCAAGCAGGAGGGTAAAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
ENST00000545616.2
3UTR-3UTR CCA 90 bp GGGCCAAACTACAAGACGAAAAAGTGCCCCGTTCCTGGCAATGATGTCAGAAGAACAACAACGAAAAGTTaGGAGGGAAAGGGAGTAGCT +
Preference number: 2 (lower is better)
Translates to: GPNYKTKKCPVPGNDVRRTTTKS*EGKGVA
Trigger: AGCTACTCCCTTTCCCTCCCAACTTTTCGTTGTTGT...TCTTCTGACATCATTGCCAGGAACGGGGCACTTTTTCGTCTTGTAGTTTGGCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
3UTR-3UTR TCA 90 bp GGGCCAAACTACAAGACGAAAAAGTGCCCCGTTCCTGGCAATGATGTCAGAAGAAAGCAAGCCTCCTTCTaGTATTGGTCACTGAAAACA +
Preference number: 2 (lower is better)
Translates to: GPNYKTKKCPVPGNDVRRKQASF*YWSLKT
Trigger: TGTTTTCAGTGACCAATATCAGAAGGAGGCTTGCTT...TCTTCTGACATCATTGCCAGGAACGGGGCACTTTTTCGTCTTGTAGTTTGGCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
3UTR-3UTR TCA 90 bp ATGATCTCTGGAAGGATACCCAAGGAACAAACCAATAGTAGGTATTCATGGAGTCCTCATGAAGTTTCTTaGGGCAAACCCGCAGGCTCA +
Preference number: 2 (lower is better)
Translates to: MISGRIPKEQTNSRYSWSPHEVS*GKPAGS
Trigger: TGAGCCTGCGGGTTTGCCTCAAGAAACTTCATGAGG...ACTCCATGAATACCTACTATTGGTTTGTTCCTTGGGTATCCTTCCAGAGATCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
3UTR-3UTR TCA 90 bp ATGTCAGAAGACCAAGAGGCGATAGTTACCAGCAACACTCTAGGAAGACCAGCTAGGAAGCTTTTTGGCTaGGGTTCTGTTCCTATCAAT +
Preference number: 2 (lower is better)
Translates to: MSEDQEAIVTSNTLGRPARKLFG*GSVPIN
Trigger: ATTGATAGGAACAGAACCTCAGCCAAAAAGCTTCCT...AGCTGGTCTTCCTAGAGTGTTGCTGGTAACTATCGCCTCTTGGTCTTCTGACAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
3UTR-3UTR TCA 90 bp ATGTCAGAAGACCAAGAGGCGATAGTTACCAGCAACACTCTAGGAAGACCAGCTGTGTACATGCATAAATaGTCTCTGGAAGGATACCCA +
Preference number: 2 (lower is better)
Translates to: MSEDQEAIVTSNTLGRPAVYMHK*SLEGYP
Trigger: TGGGTATCCTTCCAGAGATCATTTATGCATGTACAC...AGCTGGTCTTCCTAGAGTGTTGCTGGTAACTATCGCCTCTTGGTCTTCTGACAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
3UTR-3UTR GCA 90 bp AGGAACACTGCTACTCAAAGCCAAGATGGCCTTATCAAAGGCATACAACATGAGACTGGTGGCTGGTTGTaGTGGTTTTACTTGGCTCAA +
Preference number: 2 (lower is better)
Translates to: RNTATQSQDGLIKGIQHETGGWL*WFYLAQ
Trigger: TTGAGCCAAGTAAAACCAGCACAACCAGCCACCAGT...CTCATGTTGTATGCCTTTGATAAGGCCATCTTGGCTTTGAGTAGCAGTGTTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
3UTR-3UTR GCA 90 bp AAAAGTGCCCCGTTCCTGGCAATGATGTCAGAAGACCAAGAGGCGATAGTTACCCTGGACATGTCCATCTaGTTAAGAAATCTGCTTAAG +
Preference number: 2 (lower is better)
Translates to: KSAPFLAMMSEDQEAIVTLDMSI*LRNLLK
Trigger: CTTAAGCAGATTTCTTAAGCAGATGGACATGTCCAG...GGTAACTATCGCCTCTTGGTCTTCTGACATCATTGCCAGGAACGGGGCACTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
3UTR-3UTR CCA 90 bp CGTTTCTCTCCTATAAAGACACTTTCACTTTCAGTTTCGGAAGTCCAAATACTGCGACAAAGGCCTGCATaGCCTACAGAGAAACCCATC +
Preference number: 2 (lower is better)
Translates to: RFSPIKTLSLSVSEVQILRQRPA*PTEKPI
Trigger: GATGGGTTTCTCTGTAGGCCATGCAGGCCTTTGTCG...CAGTATTTGGACTTCCGAAACTGAAAGTGAAAGTGTCTTTATAGGAGAGAAACG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
3UTR-3UTR CCA 90 bp GCGTTTCTCTCCTATAAAGACACTTTCACTTTCAGTTTCGGAAGTCCAAATACTATCCTGAGGGGGAAATaGGTGACGAGGAACACTGCT +
Preference number: 2 (lower is better)
Translates to: AFLSYKDTFTFSFGSPNTILRGK*VTRNTA
Trigger: AGCAGTGTTCCTCGTCACCCATTTCCCCCTCAGGAT...AGTATTTGGACTTCCGAAACTGAAAGTGAAAGTGTCTTTATAGGAGAGAAACGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
3UTR-3UTR CCA 90 bp ATGATCTCTGGAAGGATACCCAAGGAACAAACCAATAGTAGGTATTCATGGAGTTCACAGCAGCTACACTaGAACCACAGTGCACATGTG +
Preference number: 2 (lower is better)
Translates to: MISGRIPKEQTNSRYSWSSQQLH*NHSAHV
Trigger: CACATGTGCACTGTGGTTCCAGTGTAGCTGCTGTGA...ACTCCATGAATACCTACTATTGGTTTGTTCCTTGGGTATCCTTCCAGAGATCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
3UTR-3UTR CCA 90 bp ATGATCTCTGGAAGGATACCCAAGGAACAAACCAATAGTAGGTATTCATGGAGTAGGGTGACTTTACCATaGGGTTCGAGTCTGAGCCAA +
Preference number: 2 (lower is better)
Translates to: MISGRIPKEQTNSRYSWSRVTLP*GSSLSQ
Trigger: TTGGCTCAGACTCGAACCCCATGGTAAAGTCACCCT...ACTCCATGAATACCTACTATTGGTTTGTTCCTTGGGTATCCTTCCAGAGATCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
3UTR-3UTR GCA 90 bp AAAAGTGCCCCGTTCCTGGCAATGATGTCAGAAGACCAAGAGGCGATAGTTACCGCTACAAATAGAGAATaGAAAAAGACGGTGAAAGTA +
Preference number: 2 (lower is better)
Translates to: KSAPFLAMMSEDQEAIVTATNRE*KKTVKV
Trigger: TACTTTCACCGTCTTTTTGCATTCTCTATTTGTAGC...GGTAACTATCGCCTCTTGGTCTTCTGACATCATTGCCAGGAACGGGGCACTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
3UTR-3UTR CCA 90 bp CGTTTCTCTCCTATAAAGACACTTTCACTTTCAGTTTCGGAAGTCCAAATACTGTACTCAAAGCCAAGATaGCCTTATCAAAGGCATACA +
Preference number: 2 (lower is better)
Translates to: RFSPIKTLSLSVSEVQILYSKPR*PYQRHT
Trigger: TGTATGCCTTTGATAAGGCCATCTTGGCTTTGAGTA...CAGTATTTGGACTTCCGAAACTGAAAGTGAAAGTGTCTTTATAGGAGAGAAACG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
3UTR GCA 72 bp TGTCACCAGAAGGGAGTTCCTAACACTTGCCACACCTaGTCCCCCGACCGGGGGCCTGGGAGGGAAGGGCAG +
Preference number: 3 (lower is better)
Translates to: CHQKGVPNTCHT*SPDRGPGREGQ
Trigger: CTGCCCTTCCCTCCCAGGCCCCCGGTCGGGGGAGCAGGTGTGGCAAGTGTTAGGAACTCCCTTCTGGTGACA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
3UTR TCA 72 bp ACCTGTTGTCCCAGCTCCCGAGGCGGGAGAATGGCGTaGACCTGGGAGGCGGAGCTTGCAGTGGGCCAAGAT +
Preference number: 3 (lower is better)
Translates to: TCCPSSRGGRMA*TWEAELAVGQD
Trigger: ATCTTGGCCCACTGCAAGCTCCGCCTCCCAGGTTCACGCCATTCTCCCGCCTCGGGAGCTGGGACAACAGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
3UTR GCA 72 bp TCACTCAGGGACAGTGTGGACTCAGGGCCCACTCCCTaGTGGGGCTCTGGACGGGCCTTACTGGTGCATAGG +
Preference number: 3 (lower is better)
Translates to: SLRDSVDSGPTP*WGSGRALLVHR
Trigger: CCTATGCACCAGTAAGGCCCGTCCAGAGCCCCAGCAGGGAGTGGGCCCTGAGTCCACACTGTCCCTGAGTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
3UTR GCA 72 bp AAGACCAGCTGTCACCAGAAGGGAGTTCCTAACACTTaGCACACCTGCTCCCCCGACCGGGGGCCTGGGAGG +
Preference number: 3 (lower is better)
Translates to: KTSCHQKGVPNT*HTCSPDRGPGR
Trigger: CCTCCCAGGCCCCCGGTCGGGGGAGCAGGTGTGGCAAGTGTTAGGAACTCCCTTCTGGTGACAGCTGGTCTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
3UTR-3UTR CAA 90 bp GGATGTGGGCAGCCTCCTGGATCACTCAGGGACAGTGTGGACTCAGGGCCCACTGGCTGCTGGGAAGGTTaGCTGCGACAAAGGCCTGCA +
Preference number: 3 (lower is better)
Translates to: GCGQPPGSLRDSVDSGPTGCWEG*LRQRPA
Trigger: TGCAGGCCTTTGTCGCAGCAAACCTTCCCAGCAGCC...AGTGGGCCCTGAGTCCACACTGTCCCTGAGTGATCCAGGAGGCTGCCCACATCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
3UTR-3UTR CAA 90 bp GGGCTTTGCGCCCTGGTCCAGTGCTACGTATCAACCCCCTCAACATGCCTGTGGGGCTGCTGGGAAGGTTaGCTGCGACAAAGGCCTGCA +
Preference number: 3 (lower is better)
Translates to: GLCALVQCYVSTPSTCLWGCWEG*LRQRPA
Trigger: TGCAGGCCTTTGTCGCAGCAAACCTTCCCAGCAGCC...CCACAGGCATGTTGAGGGGGTTGATACGTAGCACTGGACCAGGGCGCAAAGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
3UTR GCA 72 bp GCAGATGGAGAGGAACGGTGTGCAGTGGGCGTGAGATaGAGATCCACCAGGCTTGGGACTGGCAAAGGGAGC +
Preference number: 3 (lower is better)
Translates to: ADGEERCAVGVR*RSTRLGTGKGS
Trigger: GCTCCCTTTGCCAGTCCCAAGCCTGGTGGATCTGCATCTCACGCCCACTGCACACCGTTCCTCTCCATCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
3UTR CCA 72 bp GCCACTGCTCTTTGGAGCCACTCGAGAGGTTCACAGTaGCTCCCTTCTGAGGCAGTGGCAGTGGGCTCACAG +
Preference number: 3 (lower is better)
Translates to: ATALWSHSRGSQ*LPSEAVAVGSQ
Trigger: CTGTGAGCCCACTGCCACTGCCTCAGAAGGGAGCCACTGTGAACCTCTCGAGTGGCTCCAAAGAGCAGTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
3UTR TCA 72 bp GAAGGGCAGATGGAGAGGAACGGTGTGCAGTGGGCGTaGGATGCAGATCCACCAGGCTTGGGACTGGCAAAG +
Preference number: 3 (lower is better)
Translates to: EGQMERNGVQWA*DADPPGLGLAK
Trigger: CTTTGCCAGTCCCAAGCCTGGTGGATCTGCATCTCACGCCCACTGCACACCGTTCCTCTCCATCTGCCCTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
3UTR GCA 72 bp GTGGGCACTGCCTCACCAACCACTGGTGGCTGGTTGTaGTGGTTTTACTTGGCTCAAGGGCTGCTGGGAAGG +
Preference number: 3 (lower is better)
Translates to: VGTASPTTGGWL*WFYLAQGLLGR
Trigger: CCTTCCCAGCAGCCCTTGAGCCAAGTAAAACCAGCACAACCAGCCACCAGTGGTTGGTGAGGCAGTGCCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
ENST00000545616.2
3UTR GCA 72 bp ACCAGGCTCTGGGCACCAGCTAACCCCCACAAGAGGTaGCAGGGACGTTACTACAATCCCTGGGTGGTAGCT +
Preference number: 3 (lower is better)
Translates to: TRLWAPANPHKR*QGRYYNPWVVA
Trigger: AGCTACCACCCAGGGATTGTAGTAACGTCCCTGGCACCTCTTGTGGGGGTTAGCTGGTGCCCAGAGCCTGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
3UTR GCA 72 bp AAGCGAGGCACAAGTCTGTGCCCCTACTCCCAGGGCTaGCTGGAGGAAGCAGCTCTAACTTTCATCAGCGGG +
Preference number: 3 (lower is better)
Translates to: KRGTSLCPYSQG*LEEAALTFISG
Trigger: CCCGCTGATGAAAGTTAGAGCTGCTTCCTCCAGGCAGCCCTGGGAGTAGGGGCACAGACTTGTGCCTCGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
3UTR CCA 72 bp GCTCACAGCAGCTACACTGGAACCACAGTGCACATGTaGGGATGTGGGCAGCCTCCTGGATCACTCAGGGAC +
Preference number: 3 (lower is better)
Translates to: AHSSYTGTTVHM*GCGQPPGSLRD
Trigger: GTCCCTGAGTGATCCAGGAGGCTGCCCACATCCCCACATGTGCACTGTGGTTCCAGTGTAGCTGCTGTGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
3UTR CCA 72 bp GTGTGCAGTGGGCGTGAGATGCAGATCCACCAGGCTTaGGACTGGCAAAGGGAGCTGAGAAGAGAGTTCCCC +
Preference number: 3 (lower is better)
Translates to: VCSGREMQIHQA*DWQRELRREFP
Trigger: GGGGAACTCTCTTCTCAGCTCCCTTTGCCAGTCCCAAGCCTGGTGGATCTGCATCTCACGCCCACTGCACAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
3UTR-3UTR CAA 90 bp GGGCTTTGCGCCCTGGTCCAGTGCTACGTATCAACCCCCTCAACATGCCTGTGGAGGTGGGGGTGTGGCTaGAAAGACCTGCTCTTAGTT +
Preference number: 3 (lower is better)
Translates to: GLCALVQCYVSTPSTCLWRWGCG*KDLLLV
Trigger: AACTAAGAGCAGGTCTTTCAAGCCACACCCCCACCT...CCACAGGCATGTTGAGGGGGTTGATACGTAGCACTGGACCAGGGCGCAAAGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
3UTR GCA 72 bp CAAGGGCTGCTGGGAAGGTTTGCTGCGACAAAGGCCTaGATGGCCTACAGAGAAACCCATCCATCCGCAGGT +
Preference number: 3 (lower is better)
Translates to: QGLLGRFAATKA*MAYRETHPSAG
Trigger: ACCTGCGGATGGATGGGTTTCTCTGTAGGCCATGCAGGCCTTTGTCGCAGCAAACCTTCCCAGCAGCCCTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
ENST00000545616.2
3UTR GCA 72 bp TGGCTGGAACTATCTGGGCTTTGCGCCCTGGTCCAGTaGTACGTATCAACCCCCTCAACATGCCTGTGGCTC +
Preference number: 3 (lower is better)
Translates to: WLELSGLCALVQ*YVSTPSTCLWL
Trigger: GAGCCACAGGCATGTTGAGGGGGTTGATACGTAGCACTGGACCAGGGCGCAAAGCCCAGATAGTTCCAGCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
3UTR GCA 72 bp CAGGGGCCACCTGCCCCTATTTGGCCATTTCTGTCCTaGCTTCCCTGGCTAGGCAAGCATAGGCTTCAAGGA +
Preference number: 3 (lower is better)
Translates to: QGPPAPIWPFLS*LPWLGKHRLQG
Trigger: TCCTTGAAGCCTATGCTTGCCTAGCCAGGGAAGGCAGGACAGAAATGGCCAAATAGGGGCAGGTGGCCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
3UTR CCA 72 bp AGCCTTGTGGGCACTGCCTCACCAACCACTGGTGGCTaGTTGTGCTGGTTTTACTTGGCTCAAGGGCTGCTG +
Preference number: 3 (lower is better)
Translates to: SLVGTASPTTGG*LCWFYLAQGLL
Trigger: CAGCAGCCCTTGAGCCAAGTAAAACCAGCACAACCAGCCACCAGTGGTTGGTGAGGCAGTGCCCACAAGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
ENST00000545616.2
3UTR CCA 72 bp CAGCTACACTGGAACCACAGTGCACATGTGGGGATGTaGGCAGCCTCCTGGATCACTCAGGGACAGTGTGGA +
Preference number: 3 (lower is better)
Translates to: QLHWNHSAHVGM*AASWITQGQCG
Trigger: TCCACACTGTCCCTGAGTGATCCAGGAGGCTGCCCACATCCCCACATGTGCACTGTGGTTCCAGTGTAGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
3UTR CCA 72 bp AGTGGGCGTGAGATGCAGATCCACCAGGCTTGGGACTaGCAAAGGGAGCTGAGAAGAGAGTTCCCCCAAAGC +
Preference number: 3 (lower is better)
Translates to: SGREMQIHQAWD*QRELRREFPQS
Trigger: GCTTTGGGGGAACTCTCTTCTCAGCTCCCTTTGCCAGTCCCAAGCCTGGTGGATCTGCATCTCACGCCCACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
3UTR GCA 72 bp GTGGCTGGTTGTGCTGGTTTTACTTGGCTCAAGGGCTaGTGGGAAGGTTTGCTGCGACAAAGGCCTGCATGG +
Preference number: 3 (lower is better)
Translates to: VAGCAGFTWLKG*WEGLLRQRPAW
Trigger: CCATGCAGGCCTTTGTCGCAGCAAACCTTCCCAGCAGCCCTTGAGCCAAGTAAAACCAGCACAACCAGCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
ENST00000545616.2
3UTR GCA 72 bp TGTGCTCTCCTCTCATGGCTGGAACTATCTGGGCTTTaGGCCCTGGTCCAGTGCTACGTATCAACCCCCTCA +
Preference number: 3 (lower is better)
Translates to: CALLSWLELSGL*ALVQCYVSTPS
Trigger: TGAGGGGGTTGATACGTAGCACTGGACCAGGGCGCAAAGCCCAGATAGTTCCAGCCATGAGAGGAGAGCACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
3UTR GCA 72 bp GGGCAAAGCAGACCCAAGGTGGTGCTGAGTGCAGAGTaGAGAGCATTCTTGTGCTCTCCTCTCATGGCTGGA +
Preference number: 3 (lower is better)
Translates to: GQSRPKVVLSAE*RAFLCSPLMAG
Trigger: TCCAGCCATGAGAGGAGAGCACAAGAATGCTCTGCACTCTGCACTCAGCACCACCTTGGGTCTGCTTTGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
3UTR CCA 72 bp CTGCATGGCCTACAGAGAAACCCATCCATCCGCAGGTaGGGGTGTGGCTTGAAAGACCTGCTCTTAGTTCCC +
Preference number: 3 (lower is better)
Translates to: LHGLQRNPSIRR*GCGLKDLLLVP
Trigger: GGGAACTAAGAGCAGGTCTTTCAAGCCACACCCCCACCTGCGGATGGATGGGTTTCTCTGTAGGCCATGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
ENST00000545616.2
3UTR CCA 72 bp GCTGGTTGTGCTGGTTTTACTTGGCTCAAGGGCTGCTaGGAAGGTTTGCTGCGACAAAGGCCTGCATGGCCT +
Preference number: 3 (lower is better)
Translates to: AGCAGFTWLKGC*EGLLRQRPAWP
Trigger: AGGCCATGCAGGCCTTTGTCGCAGCAAACCTTCCCAGCAGCCCTTGAGCCAAGTAAAACCAGCACAACCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
ENST00000545616.2
3UTR CCA 72 bp GGCACTGCCTCACCAACCACTGGTGGCTGGTTGTGCTaGTTTTACTTGGCTCAAGGGCTGCTGGGAAGGTTT +
Preference number: 3 (lower is better)
Translates to: GTASPTTGGWLC*FYLAQGLLGRF
Trigger: AAACCTTCCCAGCAGCCCTTGAGCCAAGTAAAACCAGCACAACCAGCCACCAGTGGTTGGTGAGGCAGTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
ENST00000545616.2
3UTR CCA 72 bp CATGAGCCTTGTGGGCACTGCCTCACCAACCACTGGTaGCTGGTTGTGCTGGTTTTACTTGGCTCAAGGGCT +
Preference number: 3 (lower is better)
Translates to: HEPCGHCLTNHW*LVVLVLLGSRA
Trigger: AGCCCTTGAGCCAAGTAAAACCAGCACAACCAGCCACCAGTGGTTGGTGAGGCAGTGCCCACAAGGCTCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
3UTR CCA 72 bp GGTCGGCATTCCCTTCATCCAGCCGGGCCAGAAGTATaGGCCATTCTCAAAAAGCCACTGCTCTTTGGAGCC +
Preference number: 3 (lower is better)
Translates to: GRHSLHPAGPEV*AILKKPLLFGA
Trigger: GGCTCCAAAGAGCAGTGGCTTTTTGAGAATGGCCCATACTTCTGGCCCGGCTGGATGAAGGGAATGCCGACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
3UTR CCA 72 bp TCCTCTCATGGCTGGAACTATCTGGGCTTTGCGCCCTaGTCCAGTGCTACGTATCAACCCCCTCAACATGCC +
Preference number: 3 (lower is better)
Translates to: SSHGWNYLGFAP*SSATYQPPQHA
Trigger: GGCATGTTGAGGGGGTTGATACGTAGCACTGGACCAGGGCGCAAAGCCCAGATAGTTCCAGCCATGAGAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
3UTR-3UTR CAA 90 bp CCAACCACTGGTGGCTGGTTGTGCTGGTTTTACTTGGCTCAAGGGCTGCTGGGAAGGTGGGGGTGTGGCTaGAAAGACCTGCTCTTAGTT +
Preference number: 3 (lower is better)
Translates to: PTTGGWLCWFYLAQGLLGRWGCG*KDLLLV
Trigger: AACTAAGAGCAGGTCTTTCAAGCCACACCCCCACCT...TCCCAGCAGCCCTTGAGCCAAGTAAAACCAGCACAACCAGCCACCAGTGGTTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
ENST00000545616.2
3UTR GCA 72 bp CCGGGCCAGAAGTATGGGCCATTCTCAAAAAGCCACTaGTCTTTGGAGCCACTCGAGAGGTTCACAGTGGCT +
Preference number: 3 (lower is better)
Translates to: PGQKYGPFSKSH*SLEPLERFTVA
Trigger: AGCCACTGTGAACCTCTCGAGTGGCTCCAAAGAGCAGTGGCTTTTTGAGAATGGCCCATACTTCTGGCCCGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
3UTR CCA 72 bp AGAGAGCAGCCATACAGACACCACATGTGTTCCTCCTaGCTCCACACAGACGTCGTGTCCAGCAACAGTCTG +
Preference number: 3 (lower is better)
Translates to: REQPYRHHMCSS*LHTDVVSSNSL
Trigger: CAGACTGTTGCTGGACACGACGTCTGTGTGGAGCCAGGAGGAACACATGTGGTGTCTGTATGGCTGCTCTCT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
ENST00000545616.2
3UTR CCA 72 bp CACCAACCACTGGTGGCTGGTTGTGCTGGTTTTACTTaGCTCAAGGGCTGCTGGGAAGGTTTGCTGCGACAA +
Preference number: 3 (lower is better)
Translates to: HQPLVAGCAGFT*LKGCWEGLLRQ
Trigger: TTGTCGCAGCAAACCTTCCCAGCAGCCCTTGAGCCAAGTAAAACCAGCACAACCAGCCACCAGTGGTTGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
ENST00000545616.2
3UTR CCA 72 bp CAACATGAGCCTTGTGGGCACTGCCTCACCAACCACTaGTGGCTGGTTGTGCTGGTTTTACTTGGCTCAAGG +
Preference number: 3 (lower is better)
Translates to: QHEPCGHCLTNH*WLVVLVLLGSR
Trigger: CCTTGAGCCAAGTAAAACCAGCACAACCAGCCACCAGTGGTTGGTGAGGCAGTGCCCACAAGGCTCATGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
3UTR CCA 72 bp AGAGTGCAGAGCATTCTTGTGCTCTCCTCTCATGGCTaGAACTATCTGGGCTTTGCGCCCTGGTCCAGTGCT +
Preference number: 3 (lower is better)
Translates to: RVQSILVLSSHG*NYLGFAPWSSA
Trigger: AGCACTGGACCAGGGCGCAAAGCCCAGATAGTTCCAGCCATGAGAGGAGAGCACAAGAATGCTCTGCACTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
3UTR-3UTR CAA 90 bp ACCAGCTGTCACCAGAAGGGAGTTCCTAACACTTGCCACACCTGCTCCCCCGACAGCTCAGGAAGCTTTTaGGCTGAGGTTCTGTTCCTA +
Preference number: 3 (lower is better)
Translates to: TSCHQKGVPNTCHTCSPDSSGSF*AEVLFL
Trigger: TAGGAACAGAACCTCAGCCAAAAAGCTTCCTGAGCT...GTCGGGGGAGCAGGTGTGGCAAGTGTTAGGAACTCCCTTCTGGTGACAGCTGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
3UTR GCA 72 bp CCACTCCTCTTCTCTCGGCAGGGGGTAGTGTCAAAGTaGTTTGGTTGTCACAAGACCCAGACACCTAGGTTC +
Preference number: 3 (lower is better)
Translates to: PLLFSRQGVVSK*FGCHKTQTPRF
Trigger: GAACCTAGGTGTCTGGGTCTTGTGACAACCAAAGCACTTTGACACTACCCCCTGCCGAGAGAAGAGGAGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
ENST00000545616.2
3UTR GCA 72 bp GTTTTACTTGGCTCAAGGGCTGCTGGGAAGGTTTGCTaGGACAAAGGCCTGCATGGCCTACAGAGAAACCCA +
Preference number: 3 (lower is better)
Translates to: VLLGSRAAGKVC*DKGLHGLQRNP
Trigger: TGGGTTTCTCTGTAGGCCATGCAGGCCTTTGTCGCAGCAAACCTTCCCAGCAGCCCTTGAGCCAAGTAAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
ENST00000545616.2
3UTR GCA 72 bp CTGGTTTTACTTGGCTCAAGGGCTGCTGGGAAGGTTTaGTGCGACAAAGGCCTGCATGGCCTACAGAGAAAC +
Preference number: 3 (lower is better)
Translates to: LVLLGSRAAGKV*CDKGLHGLQRN
Trigger: GTTTCTCTGTAGGCCATGCAGGCCTTTGTCGCAGCAAACCTTCCCAGCAGCCCTTGAGCCAAGTAAAACCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
ENST00000545616.2
3UTR CCA 72 bp CCTGCCCCTATTTGGCCATTTCTGTCCTGCCTTCCCTaGCTAGGCAAGCATAGGCTTCAAGGACCTTATCTG +
Preference number: 3 (lower is better)
Translates to: PAPIWPFLSCLP*LGKHRLQGPYL
Trigger: CAGATAAGGTCCTTGAAGCCTATGCTTGCCTAGCCAGGGAAGGCAGGACAGAAATGGCCAAATAGGGGCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
3UTR CCA 72 bp CCCCACAAGAGGTGCCAGGGACGTTACTACAATCCCTaGGTGGTAGCTAAGGAAGCTAAGGAAGAGACTGAG +
Preference number: 3 (lower is better)
Translates to: PHKRCQGRYYNP*VVAKEAKEETE
Trigger: CTCAGTCTCTTCCTTAGCTTCCTTAGCTACCACCCAGGGATTGTAGTAACGTCCCTGGCACCTCTTGTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
3UTR TCA 72 bp CTGCAGAAGGGCCTAAGGCTAGTGAGTGACAAGAGGTaGTTCCATCACTCTCTGCCTGGAGCTCTGGGTATA +
Preference number: 3 (lower is better)
Translates to: LQKGLRLVSDKR*FHHSLPGALGI
Trigger: TATACCCAGAGCTCCAGGCAGAGAGTGATGGAATCACCTCTTGTCACTCACTAGCCTTAGGCCCTTCTGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
3UTR GCA 72 bp CTTATCAAAGGCATACAACATGAGCCTTGTGGGCACTaGCTCACCAACCACTGGTGGCTGGTTGTGCTGGTT +
Preference number: 3 (lower is better)
Translates to: LIKGIQHEPCGH*LTNHWWLVVLV
Trigger: AACCAGCACAACCAGCCACCAGTGGTTGGTGAGGCAGTGCCCACAAGGCTCATGTTGTATGCCTTTGATAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
3UTR GCA 72 bp CATCTGTCCCAAGGCCATTCCATGGAAAATGGTGGCTaGTGGCAATTAGTGAGGCTAGTCCAGAAGCAAGCC +
Preference number: 3 (lower is better)
Translates to: HLSQGHSMENGG*WQLVRLVQKQA
Trigger: GGCTTGCTTCTGGACTAGCCTCACTAATTGCCAGCAGCCACCATTTTCCATGGAATGGCCTTGGGACAGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
3UTR CCA 72 bp CCTACAGAGAAACCCATCCATCCGCAGGTGGGGGTGTaGCTTGAAAGACCTGCTCTTAGTTCCCTTCTTTAC +
Preference number: 3 (lower is better)
Translates to: PTEKPIHPQVGV*LERPALSSLLY
Trigger: GTAAAGAAGGGAACTAAGAGCAGGTCTTTCAAGCCACACCCCCACCTGCGGATGGATGGGTTTCTCTGTAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
ENST00000545616.2
3UTR CCA 72 bp AAAGGATCTTCTTGTCAAGAACAGGGTATCCGGCAATaGTGGGAGGTCCCCTGTATCCCTCAGCTCAGACCT +
Preference number: 3 (lower is better)
Translates to: KGSSCQEQGIRQ*WEVPCIPQLRP
Trigger: AGGTCTGAGCTGAGGGATACAGGGGACCTCCCACCATTGCCGGATACCCTGTTCTTGACAAGAAGATCCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
3UTR-3UTR CAA 90 bp GCACTGGGGAAAAGGATCTTCTTGTCAAGAACAGGGTATCCGGCAATGGTGGGACTAGTGATACTAGGCTaGCTGCAGGAGGATGTCACG +
Preference number: 3 (lower is better)
Translates to: ALGKRIFLSRTGYPAMVGLVILG*LQEDVT
Trigger: CGTGACATCCTCCTGCAGCAAGCCTAGTATCACTAG...TCCCACCATTGCCGGATACCCTGTTCTTGACAAGAAGATCCTTTTCCCCAGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
3UTR-3UTR CAA 90 bp GGGCCAAACTACAAGACGAAAAAGTGCCCCGTTCCTGGCAATGATGTCAGAAGAACCACTGGTGGCTGGTaGTGCTGGTTTTACTTGGCT +
Preference number: 3 (lower is better)
Translates to: GPNYKTKKCPVPGNDVRRTTGGW*CWFYLA
Trigger: AGCCAAGTAAAACCAGCACAACCAGCCACCAGTGGT...TCTTCTGACATCATTGCCAGGAACGGGGCACTTTTTCGTCTTGTAGTTTGGCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
3UTR-3UTR CAA 90 bp GCTGAGAAGGTTGTTAGTGGTCCCTCATCTGGGCAAAGCAGACCCAAGGTGGTGGCCTGCAACTTTCAGTaGGGAGAATCCTATAAAAGC +
Preference number: 3 (lower is better)
Translates to: AEKVVSGPSSGQSRPKVVACNFQ*GESYKS
Trigger: GCTTTTATAGGATTCTCCCAACTGAAAGTTGCAGGC...CACCACCTTGGGTCTGCTTTGCCCAGATGAGGGACCACTAACAACCTTCTCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
3UTR TCA 72 bp TCAAAGCCAAGATGGCCTTATCAAAGGCATACAACATaGGCCTTGTGGGCACTGCCTCACCAACCACTGGTG +
Preference number: 3 (lower is better)
Translates to: SKPRWPYQRHTT*ALWALPHQPLV
Trigger: CACCAGTGGTTGGTGAGGCAGTGCCCACAAGGCTCATGTTGTATGCCTTTGATAAGGCCATCTTGGCTTTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
3UTR TCA 72 bp CACACACCAACGGTGGACAGCCCTGCAGGAGCTTCCTaGAACTATCTACAATTCCAAGTGGATCACCAGCTT +
Preference number: 3 (lower is better)
Translates to: HTPTVDSPAGAS*NYLQFQVDHQL
Trigger: AAGCTGGTGATCCACTTGGAATTGTAGATAGTTTCAGGAAGCTCCTGCAGGGCTGTCCACCGTTGGTGTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
3UTR TCA 72 bp AGACACTTTCACTTTCAGTTTCGGAAGTCCAAATACTaGGGCACACACCAACGGTGGACAGCCCTGCAGGAG +
Preference number: 3 (lower is better)
Translates to: RHFHFQFRKSKY*GTHQRWTALQE
Trigger: CTCCTGCAGGGCTGTCCACCGTTGGTGTGTGCCTCAGTATTTGGACTTCCGAAACTGAAAGTGAAAGTGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
3UTR GCA 72 bp GAGGAAACCCGAGGGCCAAACTACAAGACGAAAAAGTaGCCCGTTCCTGGCAATGATGTCAGAAGACCAAGA +
Preference number: 3 (lower is better)
Translates to: EETRGPNYKTKK*PVPGNDVRRPR
Trigger: TCTTGGTCTTCTGACATCATTGCCAGGAACGGGGCACTTTTTCGTCTTGTAGTTTGGCCCTCGGGTTTCCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
3UTR CCA 72 bp GGTTGTCACAAGACCCAGACACCTAGGTTCCCAGTTTaGCTGGCCCAAGAGTTCTTCATGAGGCAAAAGAAG +
Preference number: 3 (lower is better)
Translates to: GCHKTQTPRFPV*LAQEFFMRQKK
Trigger: CTTCTTTTGCCTCATGAAGAACTCTTGGGCCAGCCAAACTGGGAACCTAGGTGTCTGGGTCTTGTGACAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
ENST00000545616.2
3UTR CCA 72 bp AGAAGTATGGGCCATTCTCAAAAAGCCACTGCTCTTTaGAGCCACTCGAGAGGTTCACAGTGGCTCCCTTCT +
Preference number: 3 (lower is better)
Translates to: RSMGHSQKATAL*SHSRGSQWLPS
Trigger: AGAAGGGAGCCACTGTGAACCTCTCGAGTGGCTCCAAAGAGCAGTGGCTTTTTGAGAATGGCCCATACTTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
3UTR CCA 72 bp GTGACATCTGTCCCAAGGCCATTCCATGGAAAATGGTaGCTGCTGGCAATTAGTGAGGCTAGTCCAGAAGCA +
Preference number: 3 (lower is better)
Translates to: VTSVPRPFHGKW*LLAISEASPEA
Trigger: TGCTTCTGGACTAGCCTCACTAATTGCCAGCAGCCACCATTTTCCATGGAATGGCCTTGGGACAGATGTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
3UTR CCA 72 bp GAGGTGACATCTGTCCCAAGGCCATTCCATGGAAAATaGTGGCTGCTGGCAATTAGTGAGGCTAGTCCAGAA +
Preference number: 3 (lower is better)
Translates to: EVTSVPRPFHGK*WLLAISEASPE
Trigger: TTCTGGACTAGCCTCACTAATTGCCAGCAGCCACCATTTTCCATGGAATGGCCTTGGGACAGATGTCACCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
3UTR CCA 72 bp GCGGGATCAGGCCAGGGAGATGACATGATTTTGAAGTaGGGTTGTGAAAAAGGACAAGGCCCGAGGCTATTT +
Preference number: 3 (lower is better)
Translates to: AGSGQGDDMILK*GCEKGQGPRLF
Trigger: AAATAGCCTCGGGCCTTGTCCTTTTTCACAACCCCACTTCAAAATCATGTCATCTCCCTGGCCTGATCCCGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
3UTR-3UTR CAA 90 bp GCAGGAACTACTGCTAGTGATACTAGGCTTGCTGCAGGAGGATGTCACGCTGAGAGCCTCCTTCTGATATaGGTCACTGAAAACAGCTCA +
Preference number: 3 (lower is better)
Translates to: AGTTASDTRLAAGGCHAESLLLI*VTENSS
Trigger: TGAGCTGTTTTCAGTGACCAATATCAGAAGGAGGCT...CTCAGCGTGACATCCTCCTGCAGCAAGCCTAGTATCACTAGCAGTAGTTCCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
3UTR-3UTR CAA 90 bp ACCAGCTGTCACCAGAAGGGAGTTCCTAACACTTGCCACACCTGCTCCCCCGACTTCAAATATACAGACTaGGTGAGGCTGTCTTTTGTT +
Preference number: 3 (lower is better)
Translates to: TSCHQKGVPNTCHTCSPDFKYTD*VRLSFV
Trigger: AACAAAAGACAGCCTCACCAAGTCTGTATATTTGAA...GTCGGGGGAGCAGGTGTGGCAAGTGTTAGGAACTCCCTTCTGGTGACAGCTGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
3UTR-3UTR CAA 90 bp ATGTCAGAAGACCAAGAGGCGATAGTTACCAGCAACACTCTAGGAAGACCAGCTGAGTGCAGAGCATTCTaGTGCTCTCCTCTCATGGCT +
Preference number: 3 (lower is better)
Translates to: MSEDQEAIVTSNTLGRPAECRAF*CSPLMA
Trigger: AGCCATGAGAGGAGAGCACAAGAATGCTCTGCACTC...AGCTGGTCTTCCTAGAGTGTTGCTGGTAACTATCGCCTCTTGGTCTTCTGACAT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
3UTR TCA 72 bp CAGGGAAAGCCCCTACAGCTCAGGAAGCTTTTTGGCTaGGGTTCTGTTCCTATCAATCATGATGGCAGAGGA +
Preference number: 3 (lower is better)
Translates to: QGKPLQLRKLFG*GSVPINHDGRG
Trigger: TCCTCTGCCATCATGATTGATAGGAACAGAACCTCAGCCAAAAAGCTTCCTGAGCTGTAGGGGCTTTCCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
3UTR TCA 72 bp GAAAAGTTGGGAGGGAAAGGGAGTAGCTCCATGAACTaGCGCTGGACATTCAGGCATATCCACATGAGACTC +
Preference number: 3 (lower is better)
Translates to: EKLGGKGSSSMN*RWTFRHIHMRL
Trigger: GAGTCTCATGTGGATATGCCTGAATGTCCAGCGTCAGTTCATGGAGCTACTCCCTTTCCCTCCCAACTTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
3UTR GCA 72 bp CCAAATACTGAGGCACACACCAACGGTGGACAGCCCTaGAGGAGCTTCCTGAAACTATCTACAATTCCAAGT +
Preference number: 3 (lower is better)
Translates to: PNTEAHTNGGQP*RSFLKLSTIPS
Trigger: ACTTGGAATTGTAGATAGTTTCAGGAAGCTCCTGCAGGGCTGTCCACCGTTGGTGTGTGCCTCAGTATTTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
3UTR GCA 72 bp AAAGACACAAGAGCTTGCCTAAGTGACCACAACAGTTaGAGCCACACATCACCACTGGTCCTCACTTGGAAC +
Preference number: 3 (lower is better)
Translates to: KDTRACLSDHNS*SHTSPLVLTWN
Trigger: GTTCCAAGTGAGGACCAGTGGTGATGTGTGGCTGCAACTGTTGTGGTCACTTAGGCAAGCTCTTGTGTCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
3UTR TCA 72 bp GTAATGGAGTTAGTAAGAGACCCTCATGAAGTTTCTTaGGGCAAACCCGCAGGCTCATCCACTCCTCTTCTC +
Preference number: 3 (lower is better)
Translates to: VMELVRDPHEVS*GKPAGSSTPLL
Trigger: GAGAAGAGGAGTGGATGAGCCTGCGGGTTTGCCTCAAGAAACTTCATGAGGGTCTCTTACTAACTCCATTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
ENST00000545616.2
3UTR GCA 72 bp TGTAATCCTGAGGGGGAAATGGGTGACGAGGAACACTaGTACTCAAAGCCAAGATGGCCTTATCAAAGGCAT +
Preference number: 3 (lower is better)
Translates to: CNPEGEMGDEEH*YSKPRWPYQRH
Trigger: ATGCCTTTGATAAGGCCATCTTGGCTTTGAGTAGCAGTGTTCCTCGTCACCCATTTCCCCCTCAGGATTACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
3UTR CCA 72 bp CTCACTTTCCTCGTCCTGTTTAGGAAGCAGTCCAGTTaGCATACCACGAATAGGTCACACATAGGAAATGGC +
Preference number: 3 (lower is better)
Translates to: LTFLVLFRKQSS*HTTNRSHIGNG
Trigger: GCCATTTCCTATGTGTGACCTATTCGTGGTATGCCAACTGGACTGCTTCCTAAACAGGACGAGGAAAGTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
3UTR CCA 72 bp CTCCTGAAGATAGATGCGGAAAGGGTGACTTTACCATaGGGTTCGAGTCTGAGCCAAGAGAGTTATAAAGGG +
Preference number: 3 (lower is better)
Translates to: LLKIDAERVTLP*GSSLSQESYKG
Trigger: CCCTTTATAACTCTCTTGGCTCAGACTCGAACCCCATGGTAAAGTCACCCTTTCCGCATCTATCTTCAGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
3UTR CCA 72 bp ACAAGAGGTGATTCCATCACTCTCTGCCTGGAGCTCTaGGTATACTGCCCTGGATGTATCAGGATGTATTTC +
Preference number: 3 (lower is better)
Translates to: TRGDSITLCLEL*VYCPGCIRMYF
Trigger: GAAATACATCCTGATACATCCAGGGCAGTATACCCAGAGCTCCAGGCAGAGAGTGATGGAATCACCTCTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
3UTR-3UTR CAA 90 bp GAGGCACACACCAACGGTGGACAGCCCTGCAGGAGCTTCCTGAAACTATCTACATTCAGCTTAGATGATTaGATAGCAGGTGTTGTAATC +
Preference number: 3 (lower is better)
Translates to: EAHTNGGQPCRSFLKLSTFSLDD*IAGVVI
Trigger: GATTACAACACCTGCTATCAAATCATCTAAGCTGAA...TGTAGATAGTTTCAGGAAGCTCCTGCAGGGCTGTCCACCGTTGGTGTGTGCCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
3UTR-3UTR CAA 90 bp GCTGAGAAGGTTGTTAGTGGTCCCTCATCTGGGCAAAGCAGACCCAAGGTGGTGTCATTTCTAGAAAAGTaGGACAGAAAGAGCCAAAGA +
Preference number: 3 (lower is better)
Translates to: AEKVVSGPSSGQSRPKVVSFLEK*DRKSQR
Trigger: TCTTTGGCTCTTTCTGTCCAACTTTTCTAGAAATGA...CACCACCTTGGGTCTGCTTTGCCCAGATGAGGGACCACTAACAACCTTCTCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
3UTR-3UTR CAA 90 bp ATGATCTCTGGAAGGATACCCAAGGAACAAACCAATAGTAGGTATTCATGGAGTACCCGTGGAGTCCAGTaGGGGCTGAGTTATGCTCCA +
Preference number: 3 (lower is better)
Translates to: MISGRIPKEQTNSRYSWSTRGVQ*GLSYAP
Trigger: TGGAGCATAACTCAGCCCCAACTGGACTCCACGGGT...ACTCCATGAATACCTACTATTGGTTTGTTCCTTGGGTATCCTTCCAGAGATCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
3UTR-3UTR CAA 90 bp ATGATCTCTGGAAGGATACCCAAGGAACAAACCAATAGTAGGTATTCATGGAGTGCAGTTGACGAGGAATaGAGGCAGGCGCTCCTAAGA +
Preference number: 3 (lower is better)
Translates to: MISGRIPKEQTNSRYSWSAVDEE*RQALLR
Trigger: TCTTAGGAGCGCCTGCCTCAATTCCTCGTCAACTGC...ACTCCATGAATACCTACTATTGGTTTGTTCCTTGGGTATCCTTCCAGAGATCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
3UTR GCA 72 bp AGATGTCTGCCCCACAAAATAGAAGCCTTCAGTTGCTaGTGCTCAAACTCCTGCATCAAAGACACAAGAGCT +
Preference number: 3 (lower is better)
Translates to: RCLPHKIEAFSC*CSNSCIKDTRA
Trigger: AGCTCTTGTGTCTTTGATGCAGGAGTTTGAGCAGCAGCAACTGAAGGCTTCTATTTTGTGGGGCAGACATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
3UTR CCA 72 bp GATTTGATAGCAGGTGTTGTAATCCTGAGGGGGAAATaGGTGACGAGGAACACTGCTACTCAAAGCCAAGAT +
Preference number: 3 (lower is better)
Translates to: DLIAGVVILRGK*VTRNTATQSQD
Trigger: ATCTTGGCTTTGAGTAGCAGTGTTCCTCGTCACCCATTTCCCCCTCAGGATTACAACACCTGCTATCAAATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
3UTR CCA 72 bp TACTGGTGCATAGGAGAGGGAAATGATAAGAGGAAATaGCTTCTGACTAGGCCTTTCCAAGCGCATCTCATG +
Preference number: 3 (lower is better)
Translates to: YWCIGEGNDKRK*LLTRPFQAHLM
Trigger: CATGAGATGCGCTTGGAAAGGCCTAGTCAGAAGCCATTTCCTCTTATCATTTCCCTCTCCTATGCACCAGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
3UTR-3UTR CAA 90 bp ATGTCAGAAGACCAAGAGGCGATAGTTACCAGCAACACTCTAGGAAGACCAGCTGCATCTTGTAACAATTaGGGCTCTACAGCTGAATTG +
Preference number: 3 (lower is better)
Translates to: MSEDQEAIVTSNTLGRPAASCNN*GSTAEL
Trigger: CAATTCAGCTGTAGAGCCCAAATTGTTACAAGATGC...AGCTGGTCTTCCTAGAGTGTTGCTGGTAACTATCGCCTCTTGGTCTTCTGACAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
3UTR TCA 72 bp GAAGCTTTTTGGCTGAGGTTCTGTTCCTATCAATCATaGTGGCAGAGGAGCCCATGTAACCCAGATGATGTT +
Preference number: 3 (lower is better)
Translates to: EAFWLRFCSYQS*WQRSPCNPDDV
Trigger: AACATCATCTGGGTTACATGGGCTCCTCTGCCATCATGATTGATAGGAACAGAACCTCAGCCAAAAAGCTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
3UTR GCA 72 bp CTAAGATGTCTGCCCCACAAAATAGAAGCCTTCAGTTaGTGCTGCTCAAACTCCTGCATCAAAGACACAAGA +
Preference number: 3 (lower is better)
Translates to: LRCLPHKIEAFS*CCSNSCIKDTR
Trigger: TCTTGTGTCTTTGATGCAGGAGTTTGAGCAGCAGCAACTGAAGGCTTCTATTTTGTGGGGCAGACATCTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
3UTR CCA 72 bp CATCACTCTCTGCCTGGAGCTCTGGGTATACTGCCCTaGATGTATCAGGATGTATTTCATAATGCCCAAAAA +
Preference number: 3 (lower is better)
Translates to: HHSLPGALGILP*MYQDVFHNAQK
Trigger: TTTTTGGGCATTATGAAATACATCCTGATACATCCAGGGCAGTATACCCAGAGCTCCAGGCAGAGAGTGATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
3UTR TCA 72 bp CACAGAAGTAAGGACTGGATGGTAAGCCAAAGGTGCTaGTGCTTGGTCAAAAAGTGGAGTACATCTTTGCAT +
Preference number: 3 (lower is better)
Translates to: HRSKDWMVSQRC*CLVKKWSTSLH
Trigger: ATGCAAAGATGTACTCCACTTTTTGACCAAGCATCAGCACCTTTGGCTTACCATCCAGTCCTTACTTCTGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
3UTR-3UTR CAA 90 bp ATGATCTCTGGAAGGATACCCAAGGAACAAACCAATAGTAGGTATTCATGGAGTGGGAAAAGGATCTTCTaGTCAAGAACAGGGTATCCG +
Preference number: 3 (lower is better)
Translates to: MISGRIPKEQTNSRYSWSGKRIF*SRTGYP
Trigger: CGGATACCCTGTTCTTGACAAGAAGATCCTTTTCCC...ACTCCATGAATACCTACTATTGGTTTGTTCCTTGGGTATCCTTCCAGAGATCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
3UTR CCA 72 bp CTGCAGGAGCTTCCTGAAACTATCTACAATTCCAAGTaGATCACCAGCTTCAGAATTACACAGGGATCTTAT +
Preference number: 3 (lower is better)
Translates to: LQELPETIYNSK*ITSFRITQGSY
Trigger: ATAAGATCCCTGTGTAATTCTGAAGCTGGTGATCCACTTGGAATTGTAGATAGTTTCAGGAAGCTCCTGCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
3UTR CCA 72 bp TTGCATCTTGTAACAATTTGGGCTCTACAGCTGAATTaGCAAAGTAAGGTTTACTACACAAGCCCCTCTTTT +
Preference number: 3 (lower is better)
Translates to: LHLVTIWALQLN*QSKVYYTSPSF
Trigger: AAAAGAGGGGCTTGTGTAGTAAACCTTACTTTGCCAATTCAGCTGTAGAGCCCAAATTGTTACAAGATGCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
3UTR GCA 72 bp ACTGGATATTTAGGCATGAATCTGGACATGTCCATCTaGTTAAGAAATCTGCTTAAGAAATCTGTAACAGCT +
Preference number: 3 (lower is better)
Translates to: TGYLGMNLDMSI*LRNLLKKSVTA
Trigger: AGCTGTTACAGATTTCTTAAGCAGATTTCTTAAGCAGATGGACATGTCCAGATTCATGCCTAAATATCCAGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
3UTR CCA 72 bp AAAAAGTGGAGTACATCTTTGCATCTTGTAACAATTTaGGCTCTACAGCTGAATTGGCAAAGTAAGGTTTAC +
Preference number: 3 (lower is better)
Translates to: KKWSTSLHLVTI*ALQLNWQSKVY
Trigger: GTAAACCTTACTTTGCCAATTCAGCTGTAGAGCCCAAATTGTTACAAGATGCAAAGATGTACTCCACTTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
3UTR TCA 72 bp CATGGGGATCCCTTATTAATCTTTACTAAAGAACCGTaGACCAGCATTTTCCAGTTATCAACTGGATATTTA +
Preference number: 3 (lower is better)
Translates to: HGDPLLIFTKEP*TSIFQLSTGYL
Trigger: TAAATATCCAGTTGATAACTGGAAAATGCTGGTTCACGGTTCTTTAGTAAAGATTAATAAGGGATCCCCATG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR CCA 90 bp GCATGGCCTACAGAGAAACCCATCCATCCGCAGGTGGGGGTGTGGCTTGAAAGAAATCGGGCGCGCCGGTaGCAGCGGCAGACGTGCGGG +
Preference number: 4 (lower is better)
Translates to: AWPTEKPIHPQVGVWLERNRARR*QRQTCG
Trigger: CCCGCACGTCTGCCGCTGCCACCGGCGCGCCCGATT...TCTTTCAAGCCACACCCCCACCTGCGGATGGATGGGTTTCTCTGTAGGCCATGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358395.11
CDS-3UTR CCA 90 bp CTGCCTCACCAACCACTGGTGGCTGGTTGTGCTGGTTTTACTTGGCTCAAGGGCTTTCGGGCGCGCCGGTaGCAGCGGCAGACGTGCGGG +
Preference number: 4 (lower is better)
Translates to: LPHQPLVAGCAGFTWLKGFRARR*QRQTCG
Trigger: CCCGCACGTCTGCCGCTGCCACCGGCGCGCCCGAAA...GCCCTTGAGCCAAGTAAAACCAGCACAACCAGCCACCAGTGGTTGGTGAGGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545616.2
CDS-3UTR GCA 90 bp CTGCCTCACCAACCACTGGTGGCTGGTTGTGCTGGTTTTACTTGGCTCAAGGGCTCAGGGCCCACTCCCTaGTGGGGCTCTGGACGGGCC +
Preference number: 4 (lower is better)
Translates to: LPHQPLVAGCAGFTWLKGSGPTP*WGSGRA
Trigger: GGCCCGTCCAGAGCCCCAGCAGGGAGTGGGCCCTGA...GCCCTTGAGCCAAGTAAAACCAGCACAACCAGCCACCAGTGGTTGGTGAGGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
CDS-3UTR GCA 90 bp GGCCTGCATGGCCTACAGAGAAACCCATCCATCCGCAGGTGGGGGTGTGGCTTGCTGGGAGGCGGAGCTTaGAGTGGGCCAAGATCGTGC +
Preference number: 4 (lower is better)
Translates to: GLHGLQRNPSIRRWGCGLLGGGA*SGPRSC
Trigger: GCACGATCTTGGCCCACTGCAAGCTCCGCCTCCCAG...CAAGCCACACCCCCACCTGCGGATGGATGGGTTTCTCTGTAGGCCATGCAGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR GCA 90 bp TGTGGGCACTGCCTCACCAACCACTGGTGGCTGGTTGTGCTGGTTTTACTTGGCTGGCAGCGGCAGACGTaGGGGACCGTCAGCGCCCTG +
Preference number: 4 (lower is better)
Translates to: CGHCLTNHWWLVVLVLLGWQRQT*GTVSAL
Trigger: CAGGGCGCTGACGGTCCCGCACGTCTGCCGCTGCCA...GCCAAGTAAAACCAGCACAACCAGCCACCAGTGGTTGGTGAGGCAGTGCCCACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358395.11
ENST00000545616.2
CDS-3UTR CCA 90 bp CCTACAGAGAAACCCATCCATCCGCAGGTGGGGGTGTGGCTTGAAAGACCTGCTCCCCGACCGGGGGCCTaGGAGGGAAGGGCAGATGGA +
Preference number: 4 (lower is better)
Translates to: PTEKPIHPQVGVWLERPAPRPGA*EGRADG
Trigger: TCCATCTGCCCTTCCCTCCCAGGCCCCCGGTCGGGG...AGCAGGTCTTTCAAGCCACACCCCCACCTGCGGATGGATGGGTTTCTCTGTAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR TCA 90 bp GAGGCAAACCCGCAGGCTCATCCACTCCTCTTCTCTCGGCAGGGGGTAGTGTCAACAGTGGCTCCCTTCTaGGGCAGTGGCAGTGGGCTC +
Preference number: 4 (lower is better)
Translates to: EANPQAHPLLFSRQGVVSTVAPF*GSGSGL
Trigger: GAGCCCACTGCCACTGCCTCAGAAGGGAGCCACTGT...TGACACTACCCCCTGCCGAGAGAAGAGGAGTGGATGAGCCTGCGGGTTTGCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
CDS-3UTR GCA 90 bp GTGGCAGCTGGTGTCCTAGGTAGAGAGCAGCCATACAGACACCACATGTGTTCCTCAGGGCCCACTCCCTaGTGGGGCTCTGGACGGGCC +
Preference number: 4 (lower is better)
Translates to: VAAGVLGREQPYRHHMCSSGPTP*WGSGRA
Trigger: GGCCCGTCCAGAGCCCCAGCAGGGAGTGGGCCCTGA...GGAACACATGTGGTGTCTGTATGGCTGCTCTCTACCTAGGACACCAGCTGCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
CDS-3UTR GCA 90 bp ACCAGCTGTCACCAGAAGGGAGTTCCTAACACTTGCCACACCTGCTCCCCCGACGGCACCTGCAGAGGCTaGTCAGAGCTGGGAGAGGCC +
Preference number: 4 (lower is better)
Translates to: TSCHQKGVPNTCHTCSPDGTCRG*SELGEA
Trigger: GGCCTCTCCCAGCTCTGAGCAGCCTCTGCAGGTGCC...GTCGGGGGAGCAGGTGTGGCAAGTGTTAGGAACTCCCTTCTGGTGACAGCTGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR CCA 90 bp TGCTTTGGTTGTCACAAGACCCAGACACCTAGGTTCCCAGTTTGGCTGGCCCAAGTGTGTGTGGGAGGCTaGCGCGGGCCCGCGGTCTCC +
Preference number: 4 (lower is better)
Translates to: CFGCHKTQTPRFPVWLAQVCVGG*RGPAVS
Trigger: GGAGACCGCGGGCCCGCGCCAGCCTCCCACACACAC...TTGGGCCAGCCAAACTGGGAACCTAGGTGTCTGGGTCTTGTGACAACCAAAGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336095.10
CDS-3UTR CCA 90 bp TGTGGGCACTGCCTCACCAACCACTGGTGGCTGGTTGTGCTGGTTTTACTTGGCGAGAGTGTGTGTGTGTaGGAGGCTGGCGCGGGCCCG +
Preference number: 4 (lower is better)
Translates to: CGHCLTNHWWLVVLVLLGESVCV*EAGAGP
Trigger: CGGGCCCGCGCCAGCCTCCCACACACACACACTCTC...GCCAAGTAAAACCAGCACAACCAGCCACCAGTGGTTGGTGAGGCAGTGCCCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336095.10
CDS-3UTR CCA 90 bp CTGCCTCACCAACCACTGGTGGCTGGTTGTGCTGGTTTTACTTGGCTCAAGGGCGGGCCCACTCCCTGCTaGGGCTCTGGACGGGCCTTA +
Preference number: 4 (lower is better)
Translates to: LPHQPLVAGCAGFTWLKGGPTPC*GSGRAL
Trigger: TAAGGCCCGTCCAGAGCCCCAGCAGGGAGTGGGCCC...GCCCTTGAGCCAAGTAAAACCAGCACAACCAGCCACCAGTGGTTGGTGAGGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
CDS-3UTR CCA 90 bp GCTGCGACAAAGGCCTGCATGGCCTACAGAGAAACCCATCCATCCGCAGGTGGGCAGGCGCTCCTAAGATaGAGGGAGGCGGAGAGCAGG +
Preference number: 4 (lower is better)
Translates to: AATKACMAYRETHPSAGGQALLR*REAESR
Trigger: CCTGCTCTCCGCCTCCCTCCATCTTAGGAGCGCCTG...CCCACCTGCGGATGGATGGGTTTCTCTGTAGGCCATGCAGGCCTTTGTCGCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
CDS-3UTR CCA 90 bp GCTGCGACAAAGGCCTGCATGGCCTACAGAGAAACCCATCCATCCGCAGGTGGGTGCGCAGGCCCATCCTaGTGGAGGACCCAGATGCAG +
Preference number: 4 (lower is better)
Translates to: AATKACMAYRETHPSAGGCAGPS*WRTQMQ
Trigger: CTGCATCTGGGTCCTCCACCAGGATGGGCCTGCGCA...CCCACCTGCGGATGGATGGGTTTCTCTGTAGGCCATGCAGGCCTTTGTCGCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
CDS-3UTR CCA 90 bp AGGAGGGGGAGAGGCCAAAGGGTCGGCATTCCCTTCATCCAGCCGGGCCAGAAGGGAGGGAAGGGCAGATaGAGAGGAACGGTGTGCAGT +
Preference number: 4 (lower is better)
Translates to: RRGRGQRVGIPFIQPGQKGGKGR*RGTVCS
Trigger: ACTGCACACCGTTCCTCTCCATCTGCCCTTCCCTCC...CTTCTGGCCCGGCTGGATGAAGGGAATGCCGACCCTTTGGCCTCTCCCCCTCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR GCA 90 bp AGGAGGGGGAGAGGCCAAAGGGTCGGCATTCCCTTCATCCAGCCGGGCCAGAAGGCTGCTGGGAAGGTTTaGTGCGACAAAGGCCTGCAT +
Preference number: 4 (lower is better)
Translates to: RRGRGQRVGIPFIQPGQKAAGKV*CDKGLH
Trigger: ATGCAGGCCTTTGTCGCAGCAAACCTTCCCAGCAGC...CTTCTGGCCCGGCTGGATGAAGGGAATGCCGACCCTTTGGCCTCTCCCCCTCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
CDS-3UTR GCA 90 bp CATCCGCAGGTGGGGGTGTGGCTTGAAAGACCTGCTCTTAGTTCCCTTCTTTACTCAGGGCCCACTCCCTaGTGGGGCTCTGGACGGGCC +
Preference number: 4 (lower is better)
Translates to: HPQVGVWLERPALSSLLYSGPTP*WGSGRA
Trigger: GGCCCGTCCAGAGCCCCAGCAGGGAGTGGGCCCTGA...GTAAAGAAGGGAACTAAGAGCAGGTCTTTCAAGCCACACCCCCACCTGCGGATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
CDS-3UTR GCA 90 bp GCTGGGAAGGTTTGCTGCGACAAAGGCCTGCATGGCCTACAGAGAAACCCATCCAACACTTGCCACACCTaGTCCCCCGACCGGGGGCCT +
Preference number: 4 (lower is better)
Translates to: AGKVCCDKGLHGLQRNPSNTCHT*SPDRGP
Trigger: AGGCCCCCGGTCGGGGGAGCAGGTGTGGCAAGTGTT...GGATGGGTTTCTCTGTAGGCCATGCAGGCCTTTGTCGCAGCAAACCTTCCCAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR GCA 90 bp TGCTTTGGTTGTCACAAGACCCAGACACCTAGGTTCCCAGTTTGGCTGGCCCAATGGCAGCGGCAGACGTaGGGGACCGTCAGCGCCCTG +
Preference number: 4 (lower is better)
Translates to: CFGCHKTQTPRFPVWLAQWQRQT*GTVSAL
Trigger: CAGGGCGCTGACGGTCCCGCACGTCTGCCGCTGCCA...TTGGGCCAGCCAAACTGGGAACCTAGGTGTCTGGGTCTTGTGACAACCAAAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358395.11
ENST00000545616.2
CDS-3UTR CCA 90 bp GCAGCTGGTGTCCTAGGTAGAGAGCAGCCATACAGACACCACATGTGTTCCTCCGGGCCCACTCCCTGCTaGGGCTCTGGACGGGCCTTA +
Preference number: 4 (lower is better)
Translates to: AAGVLGREQPYRHHMCSSGPTPC*GSGRAL
Trigger: TAAGGCCCGTCCAGAGCCCCAGCAGGGAGTGGGCCC...GGAGGAACACATGTGGTGTCTGTATGGCTGCTCTCTACCTAGGACACCAGCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
CDS-3UTR TCA 90 bp AGGAGGGGGAGAGGCCAAAGGGTCGGCATTCCCTTCATCCAGCCGGGCCAGAAGTGCTTGACATGGAGATaGGGCTCCAGGAGAGAGAGT +
Preference number: 4 (lower is better)
Translates to: RRGRGQRVGIPFIQPGQKCLTWR*GSRRES
Trigger: ACTCTCTCTCCTGGAGCCTCATCTCCATGTCAAGCA...CTTCTGGCCCGGCTGGATGAAGGGAATGCCGACCCTTTGGCCTCTCCCCCTCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
CDS-3UTR GCA 90 bp GAGGCAAACCCGCAGGCTCATCCACTCCTCTTCTCTCGGCAGGGGGTAGTGTCATGCGCCCTGGTCCAGTaGTACGTATCAACCCCCTCA +
Preference number: 4 (lower is better)
Translates to: EANPQAHPLLFSRQGVVSCALVQ*YVSTPS
Trigger: TGAGGGGGTTGATACGTAGCACTGGACCAGGGCGCA...TGACACTACCCCCTGCCGAGAGAAGAGGAGTGGATGAGCCTGCGGGTTTGCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
CDS-3UTR GCA 90 bp GTTTGCTGCGACAAAGGCCTGCATGGCCTACAGAGAAACCCATCCATCCGCAGGCGAGGCACAAGTCTGTaGCCCTACTCCCAGGGCTGC +
Preference number: 4 (lower is better)
Translates to: VCCDKGLHGLQRNPSIRRRGTSL*PYSQGC
Trigger: GCAGCCCTGGGAGTAGGGGCACAGACTTGTGCCTCG...CCTGCGGATGGATGGGTTTCTCTGTAGGCCATGCAGGCCTTTGTCGCAGCAAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR GCA 90 bp CAACCACTGGTGGCTGGTTGTGCTGGTTTTACTTGGCTCAAGGGCTGCTGGGAAAACACTTGCCACACCTaGTCCCCCGACCGGGGGCCT +
Preference number: 4 (lower is better)
Translates to: QPLVAGCAGFTWLKGCWENTCHT*SPDRGP
Trigger: AGGCCCCCGGTCGGGGGAGCAGGTGTGGCAAGTGTT...TTCCCAGCAGCCCTTGAGCCAAGTAAAACCAGCACAACCAGCCACCAGTGGTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR CCA 90 bp GGGCTTTGCGCCCTGGTCCAGTGCTACGTATCAACCCCCTCAACATGCCTGTGGCCGCAGGTGGGGGTGTaGCTTGAAAGACCTGCTCTT +
Preference number: 4 (lower is better)
Translates to: GLCALVQCYVSTPSTCLWPQVGV*LERPAL
Trigger: AAGAGCAGGTCTTTCAAGCCACACCCCCACCTGCGG...CCACAGGCATGTTGAGGGGGTTGATACGTAGCACTGGACCAGGGCGCAAAGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
CDS-3UTR CCA 90 bp GCTGCGACAAAGGCCTGCATGGCCTACAGAGAAACCCATCCATCCGCAGGTGGGCCATCCATCCGCAGGTaGGGGTGTGGCTTGAAAGAC +
Preference number: 4 (lower is better)
Translates to: AATKACMAYRETHPSAGGPSIRR*GCGLKD
Trigger: GTCTTTCAAGCCACACCCCCACCTGCGGATGGATGG...CCCACCTGCGGATGGATGGGTTTCTCTGTAGGCCATGCAGGCCTTTGTCGCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
ENST00000545616.2
CDS-3UTR CCA 90 bp CTGCCTCACCAACCACTGGTGGCTGGTTGTGCTGGTTTTACTTGGCTCAAGGGCCAGGCGCTCCTAAGATaGAGGGAGGCGGAGAGCAGG +
Preference number: 4 (lower is better)
Translates to: LPHQPLVAGCAGFTWLKGQALLR*REAESR
Trigger: CCTGCTCTCCGCCTCCCTCCATCTTAGGAGCGCCTG...GCCCTTGAGCCAAGTAAAACCAGCACAACCAGCCACCAGTGGTTGGTGAGGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
CDS-3UTR CCA 90 bp GGATGTGGGCAGCCTCCTGGATCACTCAGGGACAGTGTGGACTCAGGGCCCACTCTGGGCTTTGCGCCCTaGTCCAGTGCTACGTATCAA +
Preference number: 4 (lower is better)
Translates to: GCGQPPGSLRDSVDSGPTLGFAP*SSATYQ
Trigger: TTGATACGTAGCACTGGACCAGGGCGCAAAGCCCAG...AGTGGGCCCTGAGTCCACACTGTCCCTGAGTGATCCAGGAGGCTGCCCACATCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
CDS-3UTR CCA 90 bp CATCCACTCCTCTTCTCTCGGCAGGGGGTAGTGTCAAAGTGCTTTGGTTGTCACCCCGAGGCGGGAGAATaGCGTGAACCTGGGAGGCGG +
Preference number: 4 (lower is better)
Translates to: HPLLFSRQGVVSKCFGCHPEAGE*REPGRR
Trigger: CCGCCTCCCAGGTTCACGCCATTCTCCCGCCTCGGG...GTGACAACCAAAGCACTTTGACACTACCCCCTGCCGAGAGAAGAGGAGTGGATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR TCA 90 bp TTCTCAAAAAGCCACTGCTCTTTGGAGCCACTCGAGAGGTTCACAGTGGCTCCCTCCGTGATCTCCAGGTaGCAGCCCCGCTCCGCCCTT +
Preference number: 4 (lower is better)
Translates to: FSKSHCSLEPLERFTVAPSVISR*QPRSAL
Trigger: AAGGGCGGAGCGGGGCTGTCACCTGGAGATCACGGA...GGGAGCCACTGTGAACCTCTCGAGTGGCTCCAAAGAGCAGTGGCTTTTTGAGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000336095.10
CDS-3UTR TCA 90 bp AGGAGGGGGAGAGGCCAAAGGGTCGGCATTCCCTTCATCCAGCCGGGCCAGAAGAAGAGCTTGCCTAAGTaGCCACAACAGTTGCAGCCA +
Preference number: 4 (lower is better)
Translates to: RRGRGQRVGIPFIQPGQKKSLPK*PQQLQP
Trigger: TGGCTGCAACTGTTGTGGTCACTTAGGCAAGCTCTT...CTTCTGGCCCGGCTGGATGAAGGGAATGCCGACCCTTTGGCCTCTCCCCCTCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR TCA 90 bp GCACTGCCTCACCAACCACTGGTGGCTGGTTGTGCTGGTTTTACTTGGCTCAAGCCTGTCCCAGCCTCCTaGGTGGCTGGGATTACAGGC +
Preference number: 4 (lower is better)
Translates to: ALPHQPLVAGCAGFTWLKPVPAS*VAGITG
Trigger: GCCTGTAATCCCAGCCACTCAGGAGGCTGGGACAGG...CTTGAGCCAAGTAAAACCAGCACAACCAGCCACCAGTGGTTGGTGAGGCAGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR GCA 90 bp GGGCTTTGCGCCCTGGTCCAGTGCTACGTATCAACCCCCTCAACATGCCTGTGGCTATACAATGTTCTCTaGCCCAGGAAGGGGCCCCTG +
Preference number: 4 (lower is better)
Translates to: GLCALVQCYVSTPSTCLWLYNVL*PRKGPL
Trigger: CAGGGGCCCCTTCCTGGGGCAGAGAACATTGTATAG...CCACAGGCATGTTGAGGGGGTTGATACGTAGCACTGGACCAGGGCGCAAAGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
CDS-3UTR GCA 90 bp AGGAGGGGGAGAGGCCAAAGGGTCGGCATTCCCTTCATCCAGCCGGGCCAGAAGGGTGACGAGGAACACTaGTACTCAAAGCCAAGATGG +
Preference number: 4 (lower is better)
Translates to: RRGRGQRVGIPFIQPGQKGDEEH*YSKPRW
Trigger: CCATCTTGGCTTTGAGTAGCAGTGTTCCTCGTCACC...CTTCTGGCCCGGCTGGATGAAGGGAATGCCGACCCTTTGGCCTCTCCCCCTCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
CDS-3UTR GCA 90 bp CTTGAGGCAAACCCGCAGGCTCATCCACTCCTCTTCTCTCGGCAGGGGGTAGTGTGGCCATTTCTGTCCTaGCTTCCCTGGCTAGGCAAG +
Preference number: 4 (lower is better)
Translates to: LEANPQAHPLLFSRQGVVWPFLS*LPWLGK
Trigger: CTTGCCTAGCCAGGGAAGGCAGGACAGAAATGGCCA...CACTACCCCCTGCCGAGAGAAGAGGAGTGGATGAGCCTGCGGGTTTGCCTCAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR GCA 90 bp AGGAGGGGGAGAGGCCAAAGGGTCGGCATTCCCTTCATCCAGCCGGGCCAGAAGGATTCCATCACTCTCTaGCTGGAGCTCTGGGTATAC +
Preference number: 4 (lower is better)
Translates to: RRGRGQRVGIPFIQPGQKDSITL*LELWVY
Trigger: GTATACCCAGAGCTCCAGGCAGAGAGTGATGGAATC...CTTCTGGCCCGGCTGGATGAAGGGAATGCCGACCCTTTGGCCTCTCCCCCTCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR GCA 90 bp TTCTCAAAAAGCCACTGCTCTTTGGAGCCACTCGAGAGGTTCACAGTGGCTCCCGGCACCTGCAGAGGCTaGTCAGAGCTGGGAGAGGCC +
Preference number: 4 (lower is better)
Translates to: FSKSHCSLEPLERFTVAPGTCRG*SELGEA
Trigger: GGCCTCTCCCAGCTCTGAGCAGCCTCTGCAGGTGCC...GGGAGCCACTGTGAACCTCTCGAGTGGCTCCAAAGAGCAGTGGCTTTTTGAGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR GCA 90 bp ACCAGCTGTCACCAGAAGGGAGTTCCTAACACTTGCCACACCTGCTCCCCCGACAGTGGGCCAAGATCGTaGCACTGCATTCCAGCCTGG +
Preference number: 4 (lower is better)
Translates to: TSCHQKGVPNTCHTCSPDSGPRS*HCIPAW
Trigger: CCAGGCTGGAATGCAGTGGCACGATCTTGGCCCACT...GTCGGGGGAGCAGGTGTGGCAAGTGTTAGGAACTCCCTTCTGGTGACAGCTGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR GCA 90 bp AAACCCATCCATCCGCAGGTGGGGGTGTGGCTTGAAAGACCTGCTCTTAGTTCCCTGGGAGGCGGAGCTTaGAGTGGGCCAAGATCGTGC +
Preference number: 4 (lower is better)
Translates to: KPIHPQVGVWLERPALSSLGGGA*SGPRSC
Trigger: GCACGATCTTGGCCCACTGCAAGCTCCGCCTCCCAG...GGAACTAAGAGCAGGTCTTTCAAGCCACACCCCCACCTGCGGATGGATGGGTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR GCA 90 bp ACCAGCTGTCACCAGAAGGGAGTTCCTAACACTTGCCACACCTGCTCCCCCGACGGAGTTCCTAACACTTaGCACACCTGCTCCCCCGAC +
Preference number: 4 (lower is better)
Translates to: TSCHQKGVPNTCHTCSPDGVPNT*HTCSPD
Trigger: GTCGGGGGAGCAGGTGTGGCAAGTGTTAGGAACTCC...GTCGGGGGAGCAGGTGTGGCAAGTGTTAGGAACTCCCTTCTGGTGACAGCTGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR CCA 90 bp GGGCTTTGCGCCCTGGTCCAGTGCTACGTATCAACCCCCTCAACATGCCTGTGGCACATGTGTTCCTCCTaGCTCCACACAGACGTCGTG +
Preference number: 4 (lower is better)
Translates to: GLCALVQCYVSTPSTCLWHMCSS*LHTDVV
Trigger: CACGACGTCTGTGTGGAGCCAGGAGGAACACATGTG...CCACAGGCATGTTGAGGGGGTTGATACGTAGCACTGGACCAGGGCGCAAAGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
CDS-3UTR CCA 90 bp GGATGTGGGCAGCCTCCTGGATCACTCAGGGACAGTGTGGACTCAGGGCCCACTCGACAAAGGCCTGCATaGCCTACAGAGAAACCCATC +
Preference number: 4 (lower is better)
Translates to: GCGQPPGSLRDSVDSGPTRQRPA*PTEKPI
Trigger: GATGGGTTTCTCTGTAGGCCATGCAGGCCTTTGTCG...AGTGGGCCCTGAGTCCACACTGTCCCTGAGTGATCCAGGAGGCTGCCCACATCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
CDS-3UTR CCA 90 bp GAGGCAAACCCGCAGGCTCATCCACTCCTCTTCTCTCGGCAGGGGGTAGTGTCATGCCTCACCAACCACTaGTGGCTGGTTGTGCTGGTT +
Preference number: 4 (lower is better)
Translates to: EANPQAHPLLFSRQGVVSCLTNH*WLVVLV
Trigger: AACCAGCACAACCAGCCACCAGTGGTTGGTGAGGCA...TGACACTACCCCCTGCCGAGAGAAGAGGAGTGGATGAGCCTGCGGGTTTGCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
ENST00000545616.2
CDS-3UTR CCA 90 bp GGCCTGCATGGCCTACAGAGAAACCCATCCATCCGCAGGTGGGGGTGTGGCTTGACCTGTGGGATGGAGTaGAGCAAAGCAGTTGACGAG +
Preference number: 4 (lower is better)
Translates to: GLHGLQRNPSIRRWGCGLTCGME*SKAVDE
Trigger: CTCGTCAACTGCTTTGCTCCACTCCATCCCACAGGT...CAAGCCACACCCCCACCTGCGGATGGATGGGTTTCTCTGTAGGCCATGCAGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
CDS-3UTR CCA 90 bp CAACCACTGGTGGCTGGTTGTGCTGGTTTTACTTGGCTCAAGGGCTGCTGGGAATGCGCAGGCCCATCCTaGTGGAGGACCCAGATGCAG +
Preference number: 4 (lower is better)
Translates to: QPLVAGCAGFTWLKGCWECAGPS*WRTQMQ
Trigger: CTGCATCTGGGTCCTCCACCAGGATGGGCCTGCGCA...TTCCCAGCAGCCCTTGAGCCAAGTAAAACCAGCACAACCAGCCACCAGTGGTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
CDS-3UTR CCA 90 bp CTTGAGGCAAACCCGCAGGCTCATCCACTCCTCTTCTCTCGGCAGGGGGTAGTGCCATCACTCTCTGCCTaGAGCTCTGGGTATACTGCC +
Preference number: 4 (lower is better)
Translates to: LEANPQAHPLLFSRQGVVPSLSA*SSGYTA
Trigger: GGCAGTATACCCAGAGCTCCAGGCAGAGAGTGATGG...CACTACCCCCTGCCGAGAGAAGAGGAGTGGATGAGCCTGCGGGTTTGCCTCAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR CCA 90 bp AAACCCATCCATCCGCAGGTGGGGGTGTGGCTTGAAAGACCTGCTCTTAGTTCCATCCAGGGGAGGATCTaGGCTGCTGCTGTAGGGGGC +
Preference number: 4 (lower is better)
Translates to: KPIHPQVGVWLERPALSSIQGRI*AAAVGG
Trigger: GCCCCCTACAGCAGCAGCCCAGATCCTCCCCTGGAT...GGAACTAAGAGCAGGTCTTTCAAGCCACACCCCCACCTGCGGATGGATGGGTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR TCA 90 bp GGGCTTTGCGCCCTGGTCCAGTGCTACGTATCAACCCCCTCAACATGCCTGTGGCCTCATGAAGTTTCTTaGGGCAAACCCGCAGGCTCA +
Preference number: 4 (lower is better)
Translates to: GLCALVQCYVSTPSTCLWPHEVS*GKPAGS
Trigger: TGAGCCTGCGGGTTTGCCTCAAGAAACTTCATGAGG...CCACAGGCATGTTGAGGGGGTTGATACGTAGCACTGGACCAGGGCGCAAAGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
CDS-3UTR TCA 90 bp GAGGCAAACCCGCAGGCTCATCCACTCCTCTTCTCTCGGCAGGGGGTAGTGTCACAAAGGCATACAACATaGGCCTTGTGGGCACTGCCT +
Preference number: 4 (lower is better)
Translates to: EANPQAHPLLFSRQGVVSQRHTT*ALWALP
Trigger: AGGCAGTGCCCACAAGGCTCATGTTGTATGCCTTTG...TGACACTACCCCCTGCCGAGAGAAGAGGAGTGGATGAGCCTGCGGGTTTGCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
CDS-3UTR TCA 90 bp GAGGCAAACCCGCAGGCTCATCCACTCCTCTTCTCTCGGCAGGGGGTAGTGTCAAGAGGAAATGGCTTCTaGCTAGGCCTTTCCAAGCGC +
Preference number: 4 (lower is better)
Translates to: EANPQAHPLLFSRQGVVSRGNGF*LGLSKR
Trigger: GCGCTTGGAAAGGCCTAGTCAGAAGCCATTTCCTCT...TGACACTACCCCCTGCCGAGAGAAGAGGAGTGGATGAGCCTGCGGGTTTGCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
CDS-3UTR TCA 90 bp GCTGCGACAAAGGCCTGCATGGCCTACAGAGAAACCCATCCATCCGCAGGTGGGTCATGCCCAGCCATCTaGACCAAGGACAGGTTCCTT +
Preference number: 4 (lower is better)
Translates to: AATKACMAYRETHPSAGGSCPAI*TKDRFL
Trigger: AAGGAACCTGTCCTTGGTTCAGATGGCTGGGCATGA...CCCACCTGCGGATGGATGGGTTTCTCTGTAGGCCATGCAGGCCTTTGTCGCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
CDS-3UTR TCA 90 bp GGCCTGCATGGCCTACAGAGAAACCCATCCATCCGCAGGTGGGGGTGTGGCTTGAAGGGAGTAGCTCCATaGACTGACGCTGGACATTCA +
Preference number: 4 (lower is better)
Translates to: GLHGLQRNPSIRRWGCGLKGVAP*TDAGHS
Trigger: TGAATGTCCAGCGTCAGTTCATGGAGCTACTCCCTT...CAAGCCACACCCCCACCTGCGGATGGATGGGTTTCTCTGTAGGCCATGCAGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR TCA 90 bp CTTGAGGCAAACCCGCAGGCTCATCCACTCCTCTTCTCTCGGCAGGGGGTAGTGAAGTTGAGGCTGCAGTaGGCTACAATGGTGCCACTG +
Preference number: 4 (lower is better)
Translates to: LEANPQAHPLLFSRQGVVKLRLQ*ATMVPL
Trigger: CAGTGGCACCATTGTAGCTCACTGCAGCCTCAACTT...CACTACCCCCTGCCGAGAGAAGAGGAGTGGATGAGCCTGCGGGTTTGCCTCAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR TCA 90 bp GAGGCAAACCCGCAGGCTCATCCACTCCTCTTCTCTCGGCAGGGGGTAGTGTCAAAGTTGAGGCTGCAGTaGGCTACAATGGTGCCACTG +
Preference number: 4 (lower is better)
Translates to: EANPQAHPLLFSRQGVVSKLRLQ*ATMVPL
Trigger: CAGTGGCACCATTGTAGCTCACTGCAGCCTCAACTT...TGACACTACCCCCTGCCGAGAGAAGAGGAGTGGATGAGCCTGCGGGTTTGCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR TCA 90 bp GTAGAGAGCAGCCATACAGACACCACATGTGTTCCTCCTGGCTCCACACAGACGAGTGTGTGCACAGAGTaGGGAGGCCAGCCTGGGCAA +
Preference number: 4 (lower is better)
Translates to: VESSHTDTTCVPPGSTQTSVCTE*GGQPGQ
Trigger: TTGCCCAGGCTGGCCTCCTCACTCTGTGCACACACT...CGTCTGTGTGGAGCCAGGAGGAACACATGTGGTGTCTGTATGGCTGCTCTCTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR TCA 90 bp GCACTGCCTCACCAACCACTGGTGGCTGGTTGTGCTGGTTTTACTTGGCTCAAGAGTGTGTGCACAGAGTaGGGAGGCCAGCCTGGGCAA +
Preference number: 4 (lower is better)
Translates to: ALPHQPLVAGCAGFTWLKSVCTE*GGQPGQ
Trigger: TTGCCCAGGCTGGCCTCCTCACTCTGTGCACACACT...CTTGAGCCAAGTAAAACCAGCACAACCAGCCACCAGTGGTTGGTGAGGCAGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR TCA 90 bp TCAGTTGTACCCCTAGCAACTACTAATGGTTCAGCCACCCGTGGAGTCCAGTTGGGCGGGAGAATGGCGTaGACCTGGGAGGCGGAGCTT +
Preference number: 4 (lower is better)
Translates to: SVVPLATTNGSATRGVQLGGRMA*TWEAEL
Trigger: AAGCTCCGCCTCCCAGGTTCACGCCATTCTCCCGCC...CAACTGGACTCCACGGGTGGCTGAACCATTAGTAGTTGCTAGGGGTACAACTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR GCA 90 bp CAGGTGGGGGTGTGGCTTGAAAGACCTGCTCTTAGTTCCCTTCTTTACCCTCCTGGGGGTCCACGGTCCTaGTTACTGTGCAACTGGGCC +
Preference number: 4 (lower is better)
Translates to: QVGVWLERPALSSLLYPPGGPRS*LLCNWA
Trigger: GGCCCAGTTGCACAGTAAGCAGGACCGTGGACCCCC...AGGAGGGTAAAGAAGGGAACTAAGAGCAGGTCTTTCAAGCCACACCCCCACCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
ENST00000545616.2
CDS-3UTR GCA 90 bp GTAGAGAGCAGCCATACAGACACCACATGTGTTCCTCCTGGCTCCACACAGACGAGCTGTCCAGGCACCTaGAGAGGCTGCTCAGAGCTG +
Preference number: 4 (lower is better)
Translates to: VESSHTDTTCVPPGSTQTSCPGT*RGCSEL
Trigger: CAGCTCTGAGCAGCCTCTGCAGGTGCCTGGACAGCT...CGTCTGTGTGGAGCCAGGAGGAACACATGTGGTGTCTGTATGGCTGCTCTCTAC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR GCA 90 bp CAACCACTGGTGGCTGGTTGTGCTGGTTTTACTTGGCTCAAGGGCTGCTGGGAACCCTACTCCCAGGGCTaGCTGGAGGAAGCAGCTCTA +
Preference number: 4 (lower is better)
Translates to: QPLVAGCAGFTWLKGCWEPYSQG*LEEAAL
Trigger: TAGAGCTGCTTCCTCCAGGCAGCCCTGGGAGTAGGG...TTCCCAGCAGCCCTTGAGCCAAGTAAAACCAGCACAACCAGCCACCAGTGGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR GCA 90 bp ACTGGTGGCTGGTTGTGCTGGTTTTACTTGGCTCAAGGGCTGCTGGGAAGGTTTCGAGGCACAAGTCTGTaGCCCTACTCCCAGGGCTGC +
Preference number: 4 (lower is better)
Translates to: TGGWLCWFYLAQGLLGRFRGTSL*PYSQGC
Trigger: GCAGCCCTGGGAGTAGGGGCACAGACTTGTGCCTCG...AAACCTTCCCAGCAGCCCTTGAGCCAAGTAAAACCAGCACAACCAGCCACCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR GCA 90 bp AAGGCATACAACATGAGCCTTGTGGGCACTGCCTCACCAACCACTGGTGGCTGGGAGGATCTGGGCTGCTaGTGTAGGGGGCAAGTACAC +
Preference number: 4 (lower is better)
Translates to: KAYNMSLVGTASPTTGGWEDLGC*CRGQVH
Trigger: GTGTACTTGCCCCCTACAGCAGCAGCCCAGATCCTC...CCAGCCACCAGTGGTTGGTGAGGCAGTGCCCACAAGGCTCATGTTGTATGCCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR GCA 90 bp GTGGCAGCTGGTGTCCTAGGTAGAGAGCAGCCATACAGACACCACATGTGTTCCGCAGTGGGCGTGAGATaGAGATCCACCAGGCTTGGG +
Preference number: 4 (lower is better)
Translates to: VAAGVLGREQPYRHHMCSAVGVR*RSTRLG
Trigger: CCCAAGCCTGGTGGATCTGCATCTCACGCCCACTGC...GGAACACATGTGGTGTCTGTATGGCTGCTCTCTACCTAGGACACCAGCTGCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR GCA 90 bp CTGCATGGCCTACAGAGAAACCCATCCATCCGCAGGTGGGGGTGTGGCTTGAAAGGAGTTCCTAACACTTaGCACACCTGCTCCCCCGAC +
Preference number: 4 (lower is better)
Translates to: LHGLQRNPSIRRWGCGLKGVPNT*HTCSPD
Trigger: GTCGGGGGAGCAGGTGTGGCAAGTGTTAGGAACTCC...TTTCAAGCCACACCCCCACCTGCGGATGGATGGGTTTCTCTGTAGGCCATGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR CCA 90 bp GGATGTGGGCAGCCTCCTGGATCACTCAGGGACAGTGTGGACTCAGGGCCCACTGAAGGCGTGCTTACATaGGCAAATCCCCAACTCATC +
Preference number: 4 (lower is better)
Translates to: GCGQPPGSLRDSVDSGPTEGVLT*ANPQLI
Trigger: GATGAGTTGGGGATTTGCCCATGTAAGCACGCCTTC...AGTGGGCCCTGAGTCCACACTGTCCCTGAGTGATCCAGGAGGCTGCCCACATCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
CDS-3UTR CCA 90 bp GAGGCAAACCCGCAGGCTCATCCACTCCTCTTCTCTCGGCAGGGGGTAGTGTCACCTAGGTTCCCAGTTTaGCTGGCCCAAGAGTTCTTC +
Preference number: 4 (lower is better)
Translates to: EANPQAHPLLFSRQGVVSPRFPV*LAQEFF
Trigger: GAAGAACTCTTGGGCCAGCCAAACTGGGAACCTAGG...TGACACTACCCCCTGCCGAGAGAAGAGGAGTGGATGAGCCTGCGGGTTTGCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
ENST00000545616.2
CDS-3UTR CCA 90 bp CCTACAGAGAAACCCATCCATCCGCAGGTGGGGGTGTGGCTTGAAAGACCTGCTCCGCAGGTGGGGGTGTaGCTTGAAAGACCTGCTCTT +
Preference number: 4 (lower is better)
Translates to: PTEKPIHPQVGVWLERPAPQVGV*LERPAL
Trigger: AAGAGCAGGTCTTTCAAGCCACACCCCCACCTGCGG...AGCAGGTCTTTCAAGCCACACCCCCACCTGCGGATGGATGGGTTTCTCTGTAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
ENST00000545616.2
CDS-3UTR CCA 90 bp CTTGAGGCAAACCCGCAGGCTCATCCACTCCTCTTCTCTCGGCAGGGGGTAGTGGCCGGGCCAGAAGTATaGGCCATTCTCAAAAAGCCA +
Preference number: 4 (lower is better)
Translates to: LEANPQAHPLLFSRQGVVAGPEV*AILKKP
Trigger: TGGCTTTTTGAGAATGGCCCATACTTCTGGCCCGGC...CACTACCCCCTGCCGAGAGAAGAGGAGTGGATGAGCCTGCGGGTTTGCCTCAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
CDS-3UTR CCA 90 bp GGGCTTTGCGCCCTGGTCCAGTGCTACGTATCAACCCCCTCAACATGCCTGTGGCTCACACCTGTGGGATaGAGTGGAGCAAAGCAGTTG +
Preference number: 4 (lower is better)
Translates to: GLCALVQCYVSTPSTCLWLTPVG*SGAKQL
Trigger: CAACTGCTTTGCTCCACTCCATCCCACAGGTGTGAG...CCACAGGCATGTTGAGGGGGTTGATACGTAGCACTGGACCAGGGCGCAAAGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
CDS-3UTR CCA 90 bp ACCAGCTGTCACCAGAAGGGAGTTCCTAACACTTGCCACACCTGCTCCCCCGACCCCAAGGCCATTCCATaGAAAATGGTGGCTGCTGGC +
Preference number: 4 (lower is better)
Translates to: TSCHQKGVPNTCHTCSPDPKAIP*KMVAAG
Trigger: GCCAGCAGCCACCATTTTCCATGGAATGGCCTTGGG...GTCGGGGGAGCAGGTGTGGCAAGTGTTAGGAACTCCCTTCTGGTGACAGCTGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR CCA 90 bp GGCCTACAGAGAAACCCATCCATCCGCAGGTGGGGGTGTGGCTTGAAAGACCTGCCCAAGGCCATTCCATaGAAAATGGTGGCTGCTGGC +
Preference number: 4 (lower is better)
Translates to: GLQRNPSIRRWGCGLKDLPKAIP*KMVAAG
Trigger: GCCAGCAGCCACCATTTTCCATGGAATGGCCTTGGG...CAGGTCTTTCAAGCCACACCCCCACCTGCGGATGGATGGGTTTCTCTGTAGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
CDS-3UTR CCA 90 bp CATCCACTCCTCTTCTCTCGGCAGGGGGTAGTGTCAAAGTGCTTTGGTTGTCACTGCGCAGGCCCATCCTaGTGGAGGACCCAGATGCAG +
Preference number: 4 (lower is better)
Translates to: HPLLFSRQGVVSKCFGCHCAGPS*WRTQMQ
Trigger: CTGCATCTGGGTCCTCCACCAGGATGGGCCTGCGCA...GTGACAACCAAAGCACTTTGACACTACCCCCTGCCGAGAGAAGAGGAGTGGATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
CDS-3UTR CCA 90 bp CCTACAGAGAAACCCATCCATCCGCAGGTGGGGGTGTGGCTTGAAAGACCTGCTCAGGGTATCCGGCAATaGTGGGAGGTCCCCTGTATC +
Preference number: 4 (lower is better)
Translates to: PTEKPIHPQVGVWLERPAQGIRQ*WEVPCI
Trigger: GATACAGGGGACCTCCCACCATTGCCGGATACCCTG...AGCAGGTCTTTCAAGCCACACCCCCACCTGCGGATGGATGGGTTTCTCTGTAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR CCA 90 bp GGATGTGGGCAGCCTCCTGGATCACTCAGGGACAGTGTGGACTCAGGGCCCACTCAAGGGGCTTGGCACTaGGGAAAAGGATCTTCTTGT +
Preference number: 4 (lower is better)
Translates to: GCGQPPGSLRDSVDSGPTQGAWH*GKGSSC
Trigger: ACAAGAAGATCCTTTTCCCCAGTGCCAAGCCCCTTG...AGTGGGCCCTGAGTCCACACTGTCCCTGAGTGATCCAGGAGGCTGCCCACATCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR CCA 90 bp TTCTCAAAAAGCCACTGCTCTTTGGAGCCACTCGAGAGGTTCACAGTGGCTCCCCTGCCTACCAGGCTCTaGGCACCAGCTAACCCCCAC +
Preference number: 4 (lower is better)
Translates to: FSKSHCSLEPLERFTVAPLPTRL*APANPH
Trigger: GTGGGGGTTAGCTGGTGCCCAGAGCCTGGTAGGCAG...GGGAGCCACTGTGAACCTCTCGAGTGGCTCCAAAGAGCAGTGGCTTTTTGAGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR CCA 90 bp CATCCACTCCTCTTCTCTCGGCAGGGGGTAGTGTCAAAGTGCTTTGGTTGTCACCTGCCTACCAGGCTCTaGGCACCAGCTAACCCCCAC +
Preference number: 4 (lower is better)
Translates to: HPLLFSRQGVVSKCFGCHLPTRL*APANPH
Trigger: GTGGGGGTTAGCTGGTGCCCAGAGCCTGGTAGGCAG...GTGACAACCAAAGCACTTTGACACTACCCCCTGCCGAGAGAAGAGGAGTGGATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR CCA 90 bp GTAGAGAGCAGCCATACAGACACCACATGTGTTCCTCCTGGCTCCACACAGACGTGTGGACAGAGGCACTaGGCAGCTGCTGGGAAGCGA +
Preference number: 4 (lower is better)
Translates to: VESSHTDTTCVPPGSTQTCGQRH*AAAGKR
Trigger: TCGCTTCCCAGCAGCTGCCCAGTGCCTCTGTCCACA...CGTCTGTGTGGAGCCAGGAGGAACACATGTGGTGTCTGTATGGCTGCTCTCTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR CCA 90 bp AAACCCATCCATCCGCAGGTGGGGGTGTGGCTTGAAAGACCTGCTCTTAGTTCCTGTGGACAGAGGCACTaGGCAGCTGCTGGGAAGCGA +
Preference number: 4 (lower is better)
Translates to: KPIHPQVGVWLERPALSSCGQRH*AAAGKR
Trigger: TCGCTTCCCAGCAGCTGCCCAGTGCCTCTGTCCACA...GGAACTAAGAGCAGGTCTTTCAAGCCACACCCCCACCTGCGGATGGATGGGTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR CCA 90 bp GTTTGCTGCGACAAAGGCCTGCATGGCCTACAGAGAAACCCATCCATCCGCAGGAGTACACCAGGGAGGTaGGTGTGGACAGAGGCACTG +
Preference number: 4 (lower is better)
Translates to: VCCDKGLHGLQRNPSIRRSTPGR*VWTEAL
Trigger: CAGTGCCTCTGTCCACACCCACCTCCCTGGTGTACT...CCTGCGGATGGATGGGTTTCTCTGTAGGCCATGCAGGCCTTTGTCGCAGCAAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR CCA 90 bp ATGGAAATTTTCCTCCTCATGCCCAGCCATCTGAACCAAGGACAGGTTCCTTCTCCCCGACCGGGGGCCTaGGAGGGAAGGGCAGATGGA +
Preference number: 4 (lower is better)
Translates to: MEIFLLMPSHLNQGQVPSPRPGA*EGRADG
Trigger: TCCATCTGCCCTTCCCTCCCAGGCCCCCGGTCGGGG...AGAAGGAACCTGTCCTTGGTTCAGATGGCTGGGCATGAGGAGGAAAATTTCCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR TCA 90 bp GGCCTACAGAGAAACCCATCCATCCGCAGGTGGGGGTGTGGCTTGAAAGACCTGCTTTACCCTCCTGCTTaGCATGGAGATGAGGCTCCA +
Preference number: 4 (lower is better)
Translates to: GLQRNPSIRRWGCGLKDLLYPPA*HGDEAP
Trigger: TGGAGCCTCATCTCCATGTCAAGCAGGAGGGTAAAG...CAGGTCTTTCAAGCCACACCCCCACCTGCGGATGGATGGGTTTCTCTGTAGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
ENST00000545616.2
CDS-3UTR TCA 90 bp GGCCTACAGAGAAACCCATCCATCCGCAGGTGGGGGTGTGGCTTGAAAGACCTGAGAGGAAATGGCTTCTaGCTAGGCCTTTCCAAGCGC +
Preference number: 4 (lower is better)
Translates to: GLQRNPSIRRWGCGLKDLRGNGF*LGLSKR
Trigger: GCGCTTGGAAAGGCCTAGTCAGAAGCCATTTCCTCT...CAGGTCTTTCAAGCCACACCCCCACCTGCGGATGGATGGGTTTCTCTGTAGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
CDS-3UTR TCA 90 bp GAGGCAAACCCGCAGGCTCATCCACTCCTCTTCTCTCGGCAGGGGGTAGTGTCAGTGAGTGACAAGAGGTaGTTCCATCACTCTCTGCCT +
Preference number: 4 (lower is better)
Translates to: EANPQAHPLLFSRQGVVSVSDKR*FHHSLP
Trigger: AGGCAGAGAGTGATGGAATCACCTCTTGTCACTCAC...TGACACTACCCCCTGCCGAGAGAAGAGGAGTGGATGAGCCTGCGGGTTTGCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR TCA 90 bp GGCCTGCATGGCCTACAGAGAAACCCATCCATCCGCAGGTGGGGGTGTGGCTTGGTAAGCCAAAGGTGCTaGTGCTTGGTCAAAAAGTGG +
Preference number: 4 (lower is better)
Translates to: GLHGLQRNPSIRRWGCGLVSQRC*CLVKKW
Trigger: CCACTTTTTGACCAAGCATCAGCACCTTTGGCTTAC...CAAGCCACACCCCCACCTGCGGATGGATGGGTTTCTCTGTAGGCCATGCAGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR GCA 90 bp GCTGCGACAAAGGCCTGCATGGCCTACAGAGAAACCCATCCATCCGCAGGTGGGTTTCTGTGGAAGGCGTaGTTACATGGGCAAATCCCC +
Preference number: 4 (lower is better)
Translates to: AATKACMAYRETHPSAGGFLWKA*LHGQIP
Trigger: GGGGATTTGCCCATGTAAGCACGCCTTCCACAGAAA...CCCACCTGCGGATGGATGGGTTTCTCTGTAGGCCATGCAGGCCTTTGTCGCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
ENST00000545616.2
CDS-3UTR GCA 90 bp CCTACAGAGAAACCCATCCATCCGCAGGTGGGGGTGTGGCTTGAAAGACCTGCTGCTGCGACAAAGGCCTaGATGGCCTACAGAGAAACC +
Preference number: 4 (lower is better)
Translates to: PTEKPIHPQVGVWLERPAAATKA*MAYRET
Trigger: GGTTTCTCTGTAGGCCATGCAGGCCTTTGTCGCAGC...AGCAGGTCTTTCAAGCCACACCCCCACCTGCGGATGGATGGGTTTCTCTGTAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
ENST00000545616.2
CDS-3UTR GCA 90 bp CTGCCTCACCAACCACTGGTGGCTGGTTGTGCTGGTTTTACTTGGCTCAAGGGCACTTGGCTCAAGGGCTaGTGGGAAGGTTTGCTGCGA +
Preference number: 4 (lower is better)
Translates to: LPHQPLVAGCAGFTWLKGTWLKG*WEGLLR
Trigger: TCGCAGCAAACCTTCCCAGCAGCCCTTGAGCCAAGT...GCCCTTGAGCCAAGTAAAACCAGCACAACCAGCCACCAGTGGTTGGTGAGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
ENST00000545616.2
CDS-3UTR GCA 90 bp CCTACAGAGAAACCCATCCATCCGCAGGTGGGGGTGTGGCTTGAAAGACCTGCTACTTGGCTCAAGGGCTaGTGGGAAGGTTTGCTGCGA +
Preference number: 4 (lower is better)
Translates to: PTEKPIHPQVGVWLERPATWLKG*WEGLLR
Trigger: TCGCAGCAAACCTTCCCAGCAGCCCTTGAGCCAAGT...AGCAGGTCTTTCAAGCCACACCCCCACCTGCGGATGGATGGGTTTCTCTGTAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
ENST00000545616.2
CDS-3UTR GCA 90 bp CCACTCCTCTTCTCTCGGCAGGGGGTAGTGTCAAAGTGCTTTGGTTGTCACAAGGAGCCTTGTGGGCACTaGCTCACCAACCACTGGTGG +
Preference number: 4 (lower is better)
Translates to: PLLFSRQGVVSKCFGCHKEPCGH*LTNHWW
Trigger: CCACCAGTGGTTGGTGAGGCAGTGCCCACAAGGCTC...CTTGTGACAACCAAAGCACTTTGACACTACCCCCTGCCGAGAGAAGAGGAGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
ENST00000545616.2
CDS-3UTR GCA 90 bp CTTGAGGCAAACCCGCAGGCTCATCCACTCCTCTTCTCTCGGCAGGGGGTAGTGGTGCTGAGTGCAGAGTaGAGAGCATTCTTGTGCTCT +
Preference number: 4 (lower is better)
Translates to: LEANPQAHPLLFSRQGVVVLSAE*RAFLCS
Trigger: AGAGCACAAGAATGCTCTGCACTCTGCACTCAGCAC...CACTACCCCCTGCCGAGAGAAGAGGAGTGGATGAGCCTGCGGGTTTGCCTCAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
CDS-3UTR GCA 90 bp CTGCATGGCCTACAGAGAAACCCATCCATCCGCAGGTGGGGGTGTGGCTTGAAATTCCCAGGGGCCACCTaGCCCTATTTGGCCATTTCT +
Preference number: 4 (lower is better)
Translates to: LHGLQRNPSIRRWGCGLKFPGAT*PYLAIS
Trigger: AGAAATGGCCAAATAGGGGCAGGTGGCCCCTGGGAA...TTTCAAGCCACACCCCCACCTGCGGATGGATGGGTTTCTCTGTAGGCCATGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR GCA 90 bp CCTCTTCTCTCGGCAGGGGGTAGTGTCAAAGTGCTTTGGTTGTCACAAGACCCAGCTGGGAGAGGCCTGTaGCACTGCTGTCAGCTACAG +
Preference number: 4 (lower is better)
Translates to: PLLSAGGSVKVLWLSQDPAGRGL*HCCQLQ
Trigger: CTGTAGCTGACAGCAGTGGCACAGGCCTCTCCCAGC...TGGGTCTTGTGACAACCAAAGCACTTTGACACTACCCCCTGCCGAGAGAAGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR GCA 90 bp TGCTTTGGTTGTCACAAGACCCAGACACCTAGGTTCCCAGTTTGGCTGGCCCAAGCTGGGAGAGGCCTGTaGCACTGCTGTCAGCTACAG +
Preference number: 4 (lower is better)
Translates to: CFGCHKTQTPRFPVWLAQAGRGL*HCCQLQ
Trigger: CTGTAGCTGACAGCAGTGGCACAGGCCTCTCCCAGC...TTGGGCCAGCCAAACTGGGAACCTAGGTGTCTGGGTCTTGTGACAACCAAAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR GCA 90 bp GGCCTACAGAGAAACCCATCCATCCGCAGGTGGGGGTGTGGCTTGAAAGACCTGAGTGAGCTACAATGGTaGCACTGCACTCCAGTCTGG +
Preference number: 4 (lower is better)
Translates to: GLQRNPSIRRWGCGLKDLSELQW*HCTPVW
Trigger: CCAGACTGGAGTGCAGTGGCACCATTGTAGCTCACT...CAGGTCTTTCAAGCCACACCCCCACCTGCGGATGGATGGGTTTCTCTGTAGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR GCA 90 bp AAGGTTTGCTGCGACAAAGGCCTGCATGGCCTACAGAGAAACCCATCCATCCGCTTGCCCAGGCTGGAGTaGAGTGGGGATCTTGGCTCA +
Preference number: 4 (lower is better)
Translates to: KVCCDKGLHGLQRNPSIRLPRLE*SGDLGS
Trigger: TGAGCCAAGATCCCCACTGCACTCCAGCCTGGGCAA...GCGGATGGATGGGTTTCTCTGTAGGCCATGCAGGCCTTTGTCGCAGCAAACCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR GCA 90 bp CTGCCTCACCAACCACTGGTGGCTGGTTGTGCTGGTTTTACTTGGCTCAAGGGCGGAGGTCAAGGCAGGTaGATCACGAGGTCAGGAGAT +
Preference number: 4 (lower is better)
Translates to: LPHQPLVAGCAGFTWLKGGGQGR*ITRSGD
Trigger: ATCTCCTGACCTCGTGATGCACCTGCCTTGACCTCC...GCCCTTGAGCCAAGTAAAACCAGCACAACCAGCCACCAGTGGTTGGTGAGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR GCA 90 bp GTTTGCTGCGACAAAGGCCTGCATGGCCTACAGAGAAACCCATCCATCCGCAGGGGAGGTCAAGGCAGGTaGATCACGAGGTCAGGAGAT +
Preference number: 4 (lower is better)
Translates to: VCCDKGLHGLQRNPSIRRGGQGR*ITRSGD
Trigger: ATCTCCTGACCTCGTGATGCACCTGCCTTGACCTCC...CCTGCGGATGGATGGGTTTCTCTGTAGGCCATGCAGGCCTTTGTCGCAGCAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR GCA 90 bp TTCTCAAAAAGCCACTGCTCTTTGGAGCCACTCGAGAGGTTCACAGTGGCTCCCGCAGTGGGCGTGAGATaGAGATCCACCAGGCTTGGG +
Preference number: 4 (lower is better)
Translates to: FSKSHCSLEPLERFTVAPAVGVR*RSTRLG
Trigger: CCCAAGCCTGGTGGATCTGCATCTCACGCCCACTGC...GGGAGCCACTGTGAACCTCTCGAGTGGCTCCAAAGAGCAGTGGCTTTTTGAGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR CCA 90 bp AAGGTTTGCTGCGACAAAGGCCTGCATGGCCTACAGAGAAACCCATCCATCCGCCCGCAGGTGGGGGTGTaGCTTGAAAGACCTGCTCTT +
Preference number: 4 (lower is better)
Translates to: KVCCDKGLHGLQRNPSIRPQVGV*LERPAL
Trigger: AAGAGCAGGTCTTTCAAGCCACACCCCCACCTGCGG...GCGGATGGATGGGTTTCTCTGTAGGCCATGCAGGCCTTTGTCGCAGCAAACCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
ENST00000545616.2
CDS-3UTR CCA 90 bp GCACTGCCTCACCAACCACTGGTGGCTGGTTGTGCTGGTTTTACTTGGCTCAAGCCATCCATCCGCAGGTaGGGGTGTGGCTTGAAAGAC +
Preference number: 4 (lower is better)
Translates to: ALPHQPLVAGCAGFTWLKPSIRR*GCGLKD
Trigger: GTCTTTCAAGCCACACCCCCACCTGCGGATGGATGG...CTTGAGCCAAGTAAAACCAGCACAACCAGCCACCAGTGGTTGGTGAGGCAGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
ENST00000545616.2
CDS-3UTR CCA 90 bp CAACCACTGGTGGCTGGTTGTGCTGGTTTTACTTGGCTCAAGGGCTGCTGGGAACCATCCATCCGCAGGTaGGGGTGTGGCTTGAAAGAC +
Preference number: 4 (lower is better)
Translates to: QPLVAGCAGFTWLKGCWEPSIRR*GCGLKD
Trigger: GTCTTTCAAGCCACACCCCCACCTGCGGATGGATGG...TTCCCAGCAGCCCTTGAGCCAAGTAAAACCAGCACAACCAGCCACCAGTGGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
ENST00000545616.2
CDS-3UTR CCA 90 bp CTGCCTCACCAACCACTGGTGGCTGGTTGTGCTGGTTTTACTTGGCTCAAGGGCTGGCTCAAGGGCTGCTaGGAAGGTTTGCTGCGACAA +
Preference number: 4 (lower is better)
Translates to: LPHQPLVAGCAGFTWLKGWLKGC*EGLLRQ
Trigger: TTGTCGCAGCAAACCTTCCCAGCAGCCCTTGAGCCA...GCCCTTGAGCCAAGTAAAACCAGCACAACCAGCCACCAGTGGTTGGTGAGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
ENST00000545616.2
CDS-3UTR CCA 90 bp GAGGCAAACCCGCAGGCTCATCCACTCCTCTTCTCTCGGCAGGGGGTAGTGTCACTCACCAACCACTGGTaGCTGGTTGTGCTGGTTTTA +
Preference number: 4 (lower is better)
Translates to: EANPQAHPLLFSRQGVVSLTNHW*LVVLVL
Trigger: TAAAACCAGCACAACCAGCCACCAGTGGTTGGTGAG...TGACACTACCCCCTGCCGAGAGAAGAGGAGTGGATGAGCCTGCGGGTTTGCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
ENST00000545616.2
CDS-3UTR CCA 90 bp GCTGAGAAGGTTGTTAGTGGTCCCTCATCTGGGCAAAGCAGACCCAAGGTGGTGACCACAGTGCACATGTaGGGATGTGGGCAGCCTCCT +
Preference number: 4 (lower is better)
Translates to: AEKVVSGPSSGQSRPKVVTTVHM*GCGQPP
Trigger: AGGAGGCTGCCCACATCCCCACATGTGCACTGTGGT...CACCACCTTGGGTCTGCTTTGCCCAGATGAGGGACCACTAACAACCTTCTCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
CDS-3UTR CCA 90 bp GCTGCGACAAAGGCCTGCATGGCCTACAGAGAAACCCATCCATCCGCAGGTGGGTCACAGCAGCTACACTaGAACCACAGTGCACATGTG +
Preference number: 4 (lower is better)
Translates to: AATKACMAYRETHPSAGGSQQLH*NHSAHV
Trigger: CACATGTGCACTGTGGTTCCAGTGTAGCTGCTGTGA...CCCACCTGCGGATGGATGGGTTTCTCTGTAGGCCATGCAGGCCTTTGTCGCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
CDS-3UTR CCA 90 bp CATCCACTCCTCTTCTCTCGGCAGGGGGTAGTGTCAAAGTGCTTTGGTTGTCACGGCACACACCAACGGTaGACAGCCCTGCAGGAGCTT +
Preference number: 4 (lower is better)
Translates to: HPLLFSRQGVVSKCFGCHGTHQR*TALQEL
Trigger: AAGCTCCTGCAGGGCTGTCCACCGTTGGTGTGTGCC...GTGACAACCAAAGCACTTTGACACTACCCCCTGCCGAGAGAAGAGGAGTGGATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
CDS-3UTR CCA 90 bp AATACTGAGGCACACACCAACGGTGGACAGCCCTGCAGGAGCTTCCTGAAACTAGGCACACACCAACGGTaGACAGCCCTGCAGGAGCTT +
Preference number: 4 (lower is better)
Translates to: NTEAHTNGGQPCRSFLKLGTHQR*TALQEL
Trigger: AAGCTCCTGCAGGGCTGTCCACCGTTGGTGTGTGCC...TAGTTTCAGGAAGCTCCTGCAGGGCTGTCCACCGTTGGTGTGTGCCTCAGTATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
CDS-3UTR CCA 90 bp GGATGTGGGCAGCCTCCTGGATCACTCAGGGACAGTGTGGACTCAGGGCCCACTCGGAGAGCAGGGCTGTaGAAAAGAATTTTCCATCTG +
Preference number: 4 (lower is better)
Translates to: GCGQPPGSLRDSVDSGPTRRAGL*KRIFHL
Trigger: CAGATGGAAAATTCTTTTCCACAGCCCTGCTCTCCG...AGTGGGCCCTGAGTCCACACTGTCCCTGAGTGATCCAGGAGGCTGCCCACATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
CDS-3UTR CCA 90 bp CATCCACTCCTCTTCTCTCGGCAGGGGGTAGTGTCAAAGTGCTTTGGTTGTCACTGGTTCAGCCACCCGTaGAGTCCAGTTGGGGCTGAG +
Preference number: 4 (lower is better)
Translates to: HPLLFSRQGVVSKCFGCHWFSHP*SPVGAE
Trigger: CTCAGCCCCAACTGGACTCCACGGGTGGCTGAACCA...GTGACAACCAAAGCACTTTGACACTACCCCCTGCCGAGAGAAGAGGAGTGGATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR CCA 90 bp GCAGGAACTACTGCTAGTGATACTAGGCTTGCTGCAGGAGGATGTCACGCTGAGTGGTTCAGCCACCCGTaGAGTCCAGTTGGGGCTGAG +
Preference number: 4 (lower is better)
Translates to: AGTTASDTRLAAGGCHAEWFSHP*SPVGAE
Trigger: CTCAGCCCCAACTGGACTCCACGGGTGGCTGAACCA...CTCAGCGTGACATCCTCCTGCAGCAAGCCTAGTATCACTAGCAGTAGTTCCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR CCA 90 bp AAGGCATACAACATGAGCCTTGTGGGCACTGCCTCACCAACCACTGGTGGCTGGGGCCTCCCAAAGTGCTaGGATGTTGGGATTACAGGC +
Preference number: 4 (lower is better)
Translates to: KAYNMSLVGTASPTTGGWGLPKC*DVGITG
Trigger: GCCTGTAATCCCAACATCCCAGCACTTTGGGAGGCC...CCAGCCACCAGTGGTTGGTGAGGCAGTGCCCACAAGGCTCATGTTGTATGCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR CCA 90 bp AGCCAAGATGGCCTTATCAAAGGCATACAACATGAGCCTTGTGGGCACTGCCTCATCCAGGGGAGGATCTaGGCTGCTGCTGTAGGGGGC +
Preference number: 4 (lower is better)
Translates to: SQDGLIKGIQHEPCGHCLIQGRI*AAAVGG
Trigger: GCCCCCTACAGCAGCAGCCCAGATCCTCCCCTGGAT...GAGGCAGTGCCCACAAGGCTCATGTTGTATGCCTTTGATAAGGCCATCTTGGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
3UTR CAA 72 bp TTGTGCTCTCCTCTCATGGCTGGAACTATCTGGGCTTaGCGCCCTGGTCCAGTGCTACGTATCAACCCCCTC +
Preference number: 4 (lower is better)
Translates to: LCSPLMAGTIWA*RPGPVLRINPL
Trigger: GAGGGGGTTGATACGTAGCACTGGACCAGGGCGCAAAGCCCAGATAGTTCCAGCCATGAGAGGAGAGCACAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
CDS-3UTR TCA 90 bp CTGCCTCACCAACCACTGGTGGCTGGTTGTGCTGGTTTTACTTGGCTCAAGGGCCCTCATGAAGTTTCTTaGGGCAAACCCGCAGGCTCA +
Preference number: 4 (lower is better)
Translates to: LPHQPLVAGCAGFTWLKGPHEVS*GKPAGS
Trigger: TGAGCCTGCGGGTTTGCCTCAAGAAACTTCATGAGG...GCCCTTGAGCCAAGTAAAACCAGCACAACCAGCCACCAGTGGTTGGTGAGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
ENST00000545616.2
CDS-3UTR TCA 90 bp TGTGGGCACTGCCTCACCAACCACTGGTGGCTGGTTGTGCTGGTTTTACTTGGCTGCTTGACATGGAGATaGGGCTCCAGGAGAGAGAGT +
Preference number: 4 (lower is better)
Translates to: CGHCLTNHWWLVVLVLLGCLTWR*GSRRES
Trigger: ACTCTCTCTCCTGGAGCCTCATCTCCATGTCAAGCA...GCCAAGTAAAACCAGCACAACCAGCCACCAGTGGTTGGTGAGGCAGTGCCCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
ENST00000545616.2
CDS-3UTR TCA 90 bp GGATGTGGGCAGCCTCCTGGATCACTCAGGGACAGTGTGGACTCAGGGCCCACTCCTGCAGGAGCTTCCTaGAACTATCTACAATTCCAA +
Preference number: 4 (lower is better)
Translates to: GCGQPPGSLRDSVDSGPTPAGAS*NYLQFQ
Trigger: TTGGAATTGTAGATAGTTTCAGGAAGCTCCTGCAGG...AGTGGGCCCTGAGTCCACACTGTCCCTGAGTGATCCAGGAGGCTGCCCACATCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
CDS-3UTR TCA 90 bp TGTGGGCACTGCCTCACCAACCACTGGTGGCTGGTTGTGCTGGTTTTACTTGGCTCATGCCCAGCCATCTaGACCAAGGACAGGTTCCTT +
Preference number: 4 (lower is better)
Translates to: CGHCLTNHWWLVVLVLLGSCPAI*TKDRFL
Trigger: AAGGAACCTGTCCTTGGTTCAGATGGCTGGGCATGA...GCCAAGTAAAACCAGCACAACCAGCCACCAGTGGTTGGTGAGGCAGTGCCCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
CDS-3UTR TCA 90 bp CATCCACTCCTCTTCTCTCGGCAGGGGGTAGTGTCAAAGTGCTTTGGTTGTCACGGGCAAAGGCAGAGATaGCCAAGGAAGAAAGGGGCC +
Preference number: 4 (lower is better)
Translates to: HPLLFSRQGVVSKCFGCHGQRQR*PRKKGA
Trigger: GGCCCCTTTCTTCCTTGGTCATCTCTGCCTTTGCCC...GTGACAACCAAAGCACTTTGACACTACCCCCTGCCGAGAGAAGAGGAGTGGATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR TCA 90 bp TGCTTTGGTTGTCACAAGACCCAGACACCTAGGTTCCCAGTTTGGCTGGCCCAAGGGCAAAGGCAGAGATaGCCAAGGAAGAAAGGGGCC +
Preference number: 4 (lower is better)
Translates to: CFGCHKTQTPRFPVWLAQGQRQR*PRKKGA
Trigger: GGCCCCTTTCTTCCTTGGTCATCTCTGCCTTTGCCC...TTGGGCCAGCCAAACTGGGAACCTAGGTGTCTGGGTCTTGTGACAACCAAAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR TCA 90 bp ACCAGCTGTCACCAGAAGGGAGTTCCTAACACTTGCCACACCTGCTCCCCCGACAAGGGAGTAGCTCCATaGACTGACGCTGGACATTCA +
Preference number: 4 (lower is better)
Translates to: TSCHQKGVPNTCHTCSPDKGVAP*TDAGHS
Trigger: TGAATGTCCAGCGTCAGTTCATGGAGCTACTCCCTT...GTCGGGGGAGCAGGTGTGGCAAGTGTTAGGAACTCCCTTCTGGTGACAGCTGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR TCA 90 bp GAGGCACACACCAACGGTGGACAGCCCTGCAGGAGCTTCCTGAAACTATCTACACCCCGTTCCTGGCAATaGTGTCAGAAGACCAAGAGG +
Preference number: 4 (lower is better)
Translates to: EAHTNGGQPCRSFLKLSTPRSWQ*CQKTKR
Trigger: CCTCTTGGTCTTCTGACATCATTGCCAGGAACGGGG...TGTAGATAGTTTCAGGAAGCTCCTGCAGGGCTGTCCACCGTTGGTGTGTGCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR GCA 90 bp AAACCCATCCATCCGCAGGTGGGGGTGTGGCTTGAAAGACCTGCTCTTAGTTCCCTATACAATGTTCTCTaGCCCAGGAAGGGGCCCCTG +
Preference number: 4 (lower is better)
Translates to: KPIHPQVGVWLERPALSSLYNVL*PRKGPL
Trigger: CAGGGGCCCCTTCCTGGGGCAGAGAACATTGTATAG...GGAACTAAGAGCAGGTCTTTCAAGCCACACCCCCACCTGCGGATGGATGGGTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
ENST00000545616.2
CDS-3UTR GCA 90 bp GCTGCGACAAAGGCCTGCATGGCCTACAGAGAAACCCATCCATCCGCAGGTGGGGGGGTAGTGTCAAAGTaGTTTGGTTGTCACAAGACC +
Preference number: 4 (lower is better)
Translates to: AATKACMAYRETHPSAGGGVVSK*FGCHKT
Trigger: GGTCTTGTGACAACCAAAGCACTTTGACACTACCCC...CCCACCTGCGGATGGATGGGTTTCTCTGTAGGCCATGCAGGCCTTTGTCGCAGC
56% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 4 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
ENST00000545616.2
CDS-3UTR GCA 90 bp CGCAGGTGGGGGTGTGGCTTGAAAGACCTGCTCTTAGTTCCCTTCTTTACCCTCGCTGCTGGGAAGGTTTaGTGCGACAAAGGCCTGCAT +
Preference number: 4 (lower is better)
Translates to: RRWGCGLKDLLLVPFFTLAAGKV*CDKGLH
Trigger: ATGCAGGCCTTTGTCGCAGCAAACCTTCCCAGCAGC...GAGGGTAAAGAAGGGAACTAAGAGCAGGTCTTTCAAGCCACACCCCCACCTGCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
ENST00000545616.2
CDS-3UTR GCA 90 bp GAGGCAAACCCGCAGGCTCATCCACTCCTCTTCTCTCGGCAGGGGGTAGTGTCAACTGGTGGCTGGTTGTaGTGGTTTTACTTGGCTCAA +
Preference number: 4 (lower is better)
Translates to: EANPQAHPLLFSRQGVVSTGGWL*WFYLAQ
Trigger: TTGAGCCAAGTAAAACCAGCACAACCAGCCACCAGT...TGACACTACCCCCTGCCGAGAGAAGAGGAGTGGATGAGCCTGCGGGTTTGCCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
ENST00000545616.2
CDS-3UTR GCA 90 bp CAACCACTGGTGGCTGGTTGTGCTGGTTTTACTTGGCTCAAGGGCTGCTGGGAAACACTGGAACCACAGTaGACATGTGGGGATGTGGGC +
Preference number: 4 (lower is better)
Translates to: QPLVAGCAGFTWLKGCWETLEPQ*TCGDVG
Trigger: GCCCACATCCCCACATGTGCACTGTGGTTCCAGTGT...TTCCCAGCAGCCCTTGAGCCAAGTAAAACCAGCACAACCAGCCACCAGTGGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
CDS-3UTR GCA 90 bp CTGCCTCACCAACCACTGGTGGCTGGTTGTGCTGGTTTTACTTGGCTCAAGGGCAACGGTGGACAGCCCTaGAGGAGCTTCCTGAAACTA +
Preference number: 4 (lower is better)
Translates to: LPHQPLVAGCAGFTWLKGNGGQP*RSFLKL
Trigger: TAGTTTCAGGAAGCTCCTGCAGGGCTGTCCACCGTT...GCCCTTGAGCCAAGTAAAACCAGCACAACCAGCCACCAGTGGTTGGTGAGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
CDS-3UTR GCA 90 bp CCAACCACTGGTGGCTGGTTGTGCTGGTTTTACTTGGCTCAAGGGCTGCTGGGAAACGGTGGACAGCCCTaGAGGAGCTTCCTGAAACTA +
Preference number: 4 (lower is better)
Translates to: PTTGGWLCWFYLAQGLLGNGGQP*RSFLKL
Trigger: TAGTTTCAGGAAGCTCCTGCAGGGCTGTCCACCGTT...TCCCAGCAGCCCTTGAGCCAAGTAAAACCAGCACAACCAGCCACCAGTGGTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
CDS-3UTR GCA 90 bp GCAGGAACTACTGCTAGTGATACTAGGCTTGCTGCAGGAGGATGTCACGCTGAGTGCGCCCTGGTCCAGTaGTACGTATCAACCCCCTCA +
Preference number: 4 (lower is better)
Translates to: AGTTASDTRLAAGGCHAECALVQ*YVSTPS
Trigger: TGAGGGGGTTGATACGTAGCACTGGACCAGGGCGCA...CTCAGCGTGACATCCTCCTGCAGCAAGCCTAGTATCACTAGCAGTAGTTCCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
CDS-3UTR GCA 90 bp GCTGAGAAGGTTGTTAGTGGTCCCTCATCTGGGCAAAGCAGACCCAAGGTGGTGGAACTATCTGGGCTTTaGGCCCTGGTCCAGTGCTAC +
Preference number: 4 (lower is better)
Translates to: AEKVVSGPSSGQSRPKVVELSGL*ALVQCY
Trigger: GTAGCACTGGACCAGGGCGCAAAGCCCAGATAGTTC...CACCACCTTGGGTCTGCTTTGCCCAGATGAGGGACCACTAACAACCTTCTCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
CDS-3UTR GCA 90 bp AAGGTTTGCTGCGACAAAGGCCTGCATGGCCTACAGAGAAACCCATCCATCCGCGAACTATCTGGGCTTTaGGCCCTGGTCCAGTGCTAC +
Preference number: 4 (lower is better)
Translates to: KVCCDKGLHGLQRNPSIRELSGL*ALVQCY
Trigger: GTAGCACTGGACCAGGGCGCAAAGCCCAGATAGTTC...GCGGATGGATGGGTTTCTCTGTAGGCCATGCAGGCCTTTGTCGCAGCAAACCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
CDS-3UTR GCA 90 bp CAACCACTGGTGGCTGGTTGTGCTGGTTTTACTTGGCTCAAGGGCTGCTGGGAAGGTGGAGGACCCAGATaGAGGGAGCAAATATTCGGG +
Preference number: 4 (lower is better)
Translates to: QPLVAGCAGFTWLKGCWEGGGPR*REQIFG
Trigger: CCCGAATATTTGCTCCCTGCATCTGGGTCCTCCACC...TTCCCAGCAGCCCTTGAGCCAAGTAAAACCAGCACAACCAGCCACCAGTGGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
CDS-3UTR GCA 90 bp GGCCTACAGAGAAACCCATCCATCCGCAGGTGGGGGTGTGGCTTGAAAGACCTGGATTCCATCACTCTCTaGCTGGAGCTCTGGGTATAC +
Preference number: 4 (lower is better)
Translates to: GLQRNPSIRRWGCGLKDLDSITL*LELWVY
Trigger: GTATACCCAGAGCTCCAGGCAGAGAGTGATGGAATC...CAGGTCTTTCAAGCCACACCCCCACCTGCGGATGGATGGGTTTCTCTGTAGGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR GCA 90 bp AAACCCATCCATCCGCAGGTGGGGGTGTGGCTTGAAAGACCTGCTCTTAGTTCCGGGATCTTGGCTCACTaGAACTTCTGTCTCCCGGGT +
Preference number: 4 (lower is better)
Translates to: KPIHPQVGVWLERPALSSGILAH*NFCLPG
Trigger: ACCCGGGAGACAGAAGTTGCAGTGAGCCAAGATCCC...GGAACTAAGAGCAGGTCTTTCAAGCCACACCCCCACCTGCGGATGGATGGGTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR GCA 90 bp CGCAGGTGGGGGTGTGGCTTGAAAGACCTGCTCTTAGTTCCCTTCTTTACCCTCGGGATCTTGGCTCACTaGAACTTCTGTCTCCCGGGT +
Preference number: 4 (lower is better)
Translates to: RRWGCGLKDLLLVPFFTLGILAH*NFCLPG
Trigger: ACCCGGGAGACAGAAGTTGCAGTGAGCCAAGATCCC...GAGGGTAAAGAAGGGAACTAAGAGCAGGTCTTTCAAGCCACACCCCCACCTGCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR GCA 90 bp AGAAACCCATCCATCCGCAGGTGGGGGTGTGGCTTGAAAGACCTGCTCTTAGTTGAGGATCTGGGCTGCTaGTGTAGGGGGCAAGTACAC +
Preference number: 4 (lower is better)
Translates to: RNPSIRRWGCGLKDLLLVEDLGC*CRGQVH
Trigger: GTGTACTTGCCCCCTACAGCAGCAGCCCAGATCCTC...AACTAAGAGCAGGTCTTTCAAGCCACACCCCCACCTGCGGATGGATGGGTTTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR GCA 90 bp TGTCACAAGACCCAGACACCTAGGTTCCCAGTTTGGCTGGCCCAAGAGTTCTTCTGGAGAGGAACGGTGTaGAGTGGGCGTGAGATGCAG +
Preference number: 4 (lower is better)
Translates to: CHKTQTPRFPVWLAQEFFWRGTV*SGREMQ
Trigger: CTGCATCTCACGCCCACTGCACACCGTTCCTCTCCA...GAAGAACTCTTGGGCCAGCCAAACTGGGAACCTAGGTGTCTGGGTCTTGTGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR CCA 90 bp GCATGGCCTACAGAGAAACCCATCCATCCGCAGGTGGGGGTGTGGCTTGAAAGATGCTTACTGTGCAACTaGGCCAGCTGTAGAACTGGC +
Preference number: 4 (lower is better)
Translates to: AWPTEKPIHPQVGVWLERCLLCN*ASCRTG
Trigger: GCCAGTTCTACAGCTGGCCCAGTTGCACAGTAAGCA...TCTTTCAAGCCACACCCCCACCTGCGGATGGATGGGTTTCTCTGTAGGCCATGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
ENST00000545616.2
CDS-3UTR CCA 90 bp GTTTGCTGCGACAAAGGCCTGCATGGCCTACAGAGAAACCCATCCATCCGCAGGCCTAGGTTCCCAGTTTaGCTGGCCCAAGAGTTCTTC +
Preference number: 4 (lower is better)
Translates to: VCCDKGLHGLQRNPSIRRPRFPV*LAQEFF
Trigger: GAAGAACTCTTGGGCCAGCCAAACTGGGAACCTAGG...CCTGCGGATGGATGGGTTTCTCTGTAGGCCATGCAGGCCTTTGTCGCAGCAAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
ENST00000545616.2
CDS-3UTR CCA 90 bp GGCCTGCATGGCCTACAGAGAAACCCATCCATCCGCAGGTGGGGGTGTGGCTTGAGTGTCAAAGTGCTTTaGTTGTCACAAGACCCAGAC +
Preference number: 4 (lower is better)
Translates to: GLHGLQRNPSIRRWGCGLSVKVL*LSQDPD
Trigger: GTCTGGGTCTTGTGACAACCAAAGCACTTTGACACT...CAAGCCACACCCCCACCTGCGGATGGATGGGTTTCTCTGTAGGCCATGCAGGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
ENST00000545616.2
CDS-3UTR CCA 90 bp GCAGGAACTACTGCTAGTGATACTAGGCTTGCTGCAGGAGGATGTCACGCTGAGCCGCAGGTGGGGGTGTaGCTTGAAAGACCTGCTCTT +
Preference number: 4 (lower is better)
Translates to: AGTTASDTRLAAGGCHAEPQVGV*LERPAL
Trigger: AAGAGCAGGTCTTTCAAGCCACACCCCCACCTGCGG...CTCAGCGTGACATCCTCCTGCAGCAAGCCTAGTATCACTAGCAGTAGTTCCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
CDS-3UTR CCA 90 bp GTAGAGAGCAGCCATACAGACACCACATGTGTTCCTCCTGGCTCCACACAGACGTGGCTCAAGGGCTGCTaGGAAGGTTTGCTGCGACAA +
Preference number: 4 (lower is better)
Translates to: VESSHTDTTCVPPGSTQTWLKGC*EGLLRQ
Trigger: TTGTCGCAGCAAACCTTCCCAGCAGCCCTTGAGCCA...CGTCTGTGTGGAGCCAGGAGGAACACATGTGGTGTCTGTATGGCTGCTCTCTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
ENST00000545616.2
CDS-3UTR CCA 90 bp CCAACCACTGGTGGCTGGTTGTGCTGGTTTTACTTGGCTCAAGGGCTGCTGGGAGGTGGCTGGTTGTGCTaGTTTTACTTGGCTCAAGGG +
Preference number: 4 (lower is better)
Translates to: PTTGGWLCWFYLAQGLLGGGWLC*FYLAQG
Trigger: CCCTTGAGCCAAGTAAAACCAGCACAACCAGCCACC...TCCCAGCAGCCCTTGAGCCAAGTAAAACCAGCACAACCAGCCACCAGTGGTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
ENST00000545616.2
CDS-3UTR CCA 90 bp GAGGCACACACCAACGGTGGACAGCCCTGCAGGAGCTTCCTGAAACTATCTACATGCCTCACCAACCACTaGTGGCTGGTTGTGCTGGTT +
Preference number: 4 (lower is better)
Translates to: EAHTNGGQPCRSFLKLSTCLTNH*WLVVLV
Trigger: AACCAGCACAACCAGCCACCAGTGGTTGGTGAGGCA...TGTAGATAGTTTCAGGAAGCTCCTGCAGGGCTGTCCACCGTTGGTGTGTGCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
CDS-3UTR CCA 90 bp CGCAGGTGGGGGTGTGGCTTGAAAGACCTGCTCTTAGTTCCCTTCTTTACCCTCTGCCTCACCAACCACTaGTGGCTGGTTGTGCTGGTT +
Preference number: 4 (lower is better)
Translates to: RRWGCGLKDLLLVPFFTLCLTNH*WLVVLV
Trigger: AACCAGCACAACCAGCCACCAGTGGTTGGTGAGGCA...GAGGGTAAAGAAGGGAACTAAGAGCAGGTCTTTCAAGCCACACCCCCACCTGCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
ENST00000545616.2
CDS-3UTR CCA 90 bp GCAGCTGGTGTCCTAGGTAGAGAGCAGCCATACAGACACCACATGTGTTCCTCCTGCCTCACCAACCACTaGTGGCTGGTTGTGCTGGTT +
Preference number: 4 (lower is better)
Translates to: AAGVLGREQPYRHHMCSSCLTNH*WLVVLV
Trigger: AACCAGCACAACCAGCCACCAGTGGTTGGTGAGGCA...GGAGGAACACATGTGGTGTCTGTATGGCTGCTCTCTACCTAGGACACCAGCTGC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
ENST00000545616.2
CDS-3UTR CCA 90 bp TGTGGGCACTGCCTCACCAACCACTGGTGGCTGGTTGTGCTGGTTTTACTTGGCATCCTGAGGGGGAAATaGGTGACGAGGAACACTGCT +
Preference number: 4 (lower is better)
Translates to: CGHCLTNHWWLVVLVLLGILRGK*VTRNTA
Trigger: AGCAGTGTTCCTCGTCACCCATTTCCCCCTCAGGAT...GCCAAGTAAAACCAGCACAACCAGCCACCAGTGGTTGGTGAGGCAGTGCCCACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
CDS-3UTR CCA 90 bp TGTGGGCACTGCCTCACCAACCACTGGTGGCTGGTTGTGCTGGTTTTACTTGGCCTGGACGGGCCTTACTaGTGCATAGGAGAGGGAAAT +
Preference number: 4 (lower is better)
Translates to: CGHCLTNHWWLVVLVLLGLDGPY*CIGEGN
Trigger: ATTTCCCTCTCCTATGCACCAGTAAGGCCCGTCCAG...GCCAAGTAAAACCAGCACAACCAGCCACCAGTGGTTGGTGAGGCAGTGCCCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
CDS-3UTR CCA 90 bp CCTCTTCTCTCGGCAGGGGGTAGTGTCAAAGTGCTTTGGTTGTCACAAGACCCAACCACAGTGCACATGTaGGGATGTGGGCAGCCTCCT +
Preference number: 4 (lower is better)
Translates to: PLLSAGGSVKVLWLSQDPTTVHM*GCGQPP
Trigger: AGGAGGCTGCCCACATCCCCACATGTGCACTGTGGT...TGGGTCTTGTGACAACCAAAGCACTTTGACACTACCCCCTGCCGAGAGAAGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
CDS-3UTR CCA 90 bp ACTGGTGGCTGGTTGTGCTGGTTTTACTTGGCTCAAGGGCTGCTGGGAAGGTTTACCACAGTGCACATGTaGGGATGTGGGCAGCCTCCT +
Preference number: 4 (lower is better)
Translates to: TGGWLCWFYLAQGLLGRFTTVHM*GCGQPP
Trigger: AGGAGGCTGCCCACATCCCCACATGTGCACTGTGGT...AAACCTTCCCAGCAGCCCTTGAGCCAAGTAAAACCAGCACAACCAGCCACCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
CDS-3UTR CCA 90 bp CCAACCACTGGTGGCTGGTTGTGCTGGTTTTACTTGGCTCAAGGGCTGCTGGGAACCTGTGGGATGGAGTaGAGCAAAGCAGTTGACGAG +
Preference number: 4 (lower is better)
Translates to: PTTGGWLCWFYLAQGLLGTCGME*SKAVDE
Trigger: CTCGTCAACTGCTTTGCTCCACTCCATCCCACAGGT...TCCCAGCAGCCCTTGAGCCAAGTAAAACCAGCACAACCAGCCACCAGTGGTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
CDS-3UTR CCA 90 bp TGTGGGCACTGCCTCACCAACCACTGGTGGCTGGTTGTGCTGGTTTTACTTGGCACCTGTGGGATGGAGTaGAGCAAAGCAGTTGACGAG +
Preference number: 4 (lower is better)
Translates to: CGHCLTNHWWLVVLVLLGTCGME*SKAVDE
Trigger: CTCGTCAACTGCTTTGCTCCACTCCATCCCACAGGT...GCCAAGTAAAACCAGCACAACCAGCCACCAGTGGTTGGTGAGGCAGTGCCCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
CDS-3UTR CCA 90 bp AAGGTTTGCTGCGACAAAGGCCTGCATGGCCTACAGAGAAACCCATCCATCCGCCCCAAGGCCATTCCATaGAAAATGGTGGCTGCTGGC +
Preference number: 4 (lower is better)
Translates to: KVCCDKGLHGLQRNPSIRPKAIP*KMVAAG
Trigger: GCCAGCAGCCACCATTTTCCATGGAATGGCCTTGGG...GCGGATGGATGGGTTTCTCTGTAGGCCATGCAGGCCTTTGTCGCAGCAAACCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
CDS-3UTR CCA 90 bp GCAGCTGGTGTCCTAGGTAGAGAGCAGCCATACAGACACCACATGTGTTCCTCCCTGGGCTTTGCGCCCTaGTCCAGTGCTACGTATCAA +
Preference number: 4 (lower is better)
Translates to: AAGVLGREQPYRHHMCSSLGFAP*SSATYQ
Trigger: TTGATACGTAGCACTGGACCAGGGCGCAAAGCCCAG...GGAGGAACACATGTGGTGTCTGTATGGCTGCTCTCTACCTAGGACACCAGCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
CDS-3UTR CCA 90 bp GTAGAGAGCAGCCATACAGACACCACATGTGTTCCTCCTGGCTCCACACAGACGATGGCTGGAACTATCTaGGCTTTGCGCCCTGGTCCA +
Preference number: 4 (lower is better)
Translates to: VESSHTDTTCVPPGSTQTMAGTI*ALRPGP
Trigger: TGGACCAGGGCGCAAAGCCCAGATAGTTCCAGCCAT...CGTCTGTGTGGAGCCAGGAGGAACACATGTGGTGTCTGTATGGCTGCTCTCTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
CDS-3UTR CCA 90 bp AAGGCATACAACATGAGCCTTGTGGGCACTGCCTCACCAACCACTGGTGGCTGGCTCTCCTCTCATGGCTaGAACTATCTGGGCTTTGCG +
Preference number: 4 (lower is better)
Translates to: KAYNMSLVGTASPTTGGWLSSHG*NYLGFA
Trigger: CGCAAAGCCCAGATAGTTCCAGCCATGAGAGGAGAG...CCAGCCACCAGTGGTTGGTGAGGCAGTGCCCACAAGGCTCATGTTGTATGCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
CDS-3UTR CCA 90 bp CTGCCTCACCAACCACTGGTGGCTGGTTGTGCTGGTTTTACTTGGCTCAAGGGCCTCTCCTCTCATGGCTaGAACTATCTGGGCTTTGCG +
Preference number: 4 (lower is better)
Translates to: LPHQPLVAGCAGFTWLKGLSSHG*NYLGFA
Trigger: CGCAAAGCCCAGATAGTTCCAGCCATGAGAGGAGAG...GCCCTTGAGCCAAGTAAAACCAGCACAACCAGCCACCAGTGGTTGGTGAGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
CDS-3UTR CCA 90 bp GGCCTGCATGGCCTACAGAGAAACCCATCCATCCGCAGGTGGGGGTGTGGCTTGGGAATCAAGTCAGGCTaGTTTTGTTCCCTGTTTCTG +
Preference number: 4 (lower is better)
Translates to: GLHGLQRNPSIRRWGCGLGIKSG*FCSLFL
Trigger: CAGAAACAGGGAACAAAACCAGCCTGACTTGATTCC...CAAGCCACACCCCCACCTGCGGATGGATGGGTTTCTCTGTAGGCCATGCAGGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR CCA 90 bp GCTGAGAAGGTTGTTAGTGGTCCCTCATCTGGGCAAAGCAGACCCAAGGTGGTGCTGTCCTGCCTTCCCTaGCTAGGCAAGCATAGGCTT +
Preference number: 4 (lower is better)
Translates to: AEKVVSGPSSGQSRPKVVLSCLP*LGKHRL
Trigger: AAGCCTATGCTTGCCTAGCCAGGGAAGGCAGGACAG...CACCACCTTGGGTCTGCTTTGCCCAGATGAGGGACCACTAACAACCTTCTCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR CCA 90 bp CTGCCTCACCAACCACTGGTGGCTGGTTGTGCTGGTTTTACTTGGCTCAAGGGCCCACCTGCCCCTATTTaGCCATTTCTGTCCTGCCTT +
Preference number: 4 (lower is better)
Translates to: LPHQPLVAGCAGFTWLKGPPAPI*PFLSCL
Trigger: AAGGCAGGACAGAAATGGCCAAATAGGGGCAGGTGG...GCCCTTGAGCCAAGTAAAACCAGCACAACCAGCCACCAGTGGTTGGTGAGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR CCA 90 bp AGAAACCCATCCATCCGCAGGTGGGGGTGTGGCTTGAAAGACCTGCTCTTAGTTCAGGGTATCCGGCAATaGTGGGAGGTCCCCTGTATC +
Preference number: 4 (lower is better)
Translates to: RNPSIRRWGCGLKDLLLVQGIRQ*WEVPCI
Trigger: GATACAGGGGACCTCCCACCATTGCCGGATACCCTG...AACTAAGAGCAGGTCTTTCAAGCCACACCCCCACCTGCGGATGGATGGGTTTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR CCA 90 bp GAGGCACACACCAACGGTGGACAGCCCTGCAGGAGCTTCCTGAAACTATCTACACCATCACTCTCTGCCTaGAGCTCTGGGTATACTGCC +
Preference number: 4 (lower is better)
Translates to: EAHTNGGQPCRSFLKLSTPSLSA*SSGYTA
Trigger: GGCAGTATACCCAGAGCTCCAGGCAGAGAGTGATGG...TGTAGATAGTTTCAGGAAGCTCCTGCAGGGCTGTCCACCGTTGGTGTGTGCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR CCA 90 bp ACCAGCTGTCACCAGAAGGGAGTTCCTAACACTTGCCACACCTGCTCCCCCGACAGTCAGAGTTCACTGTaGGCAAAGGCAGAGATGACC +
Preference number: 4 (lower is better)
Translates to: TSCHQKGVPNTCHTCSPDSQSSL*AKAEMT
Trigger: GGTCATCTCTGCCTTTGCCCACAGTGAACTCTGACT...GTCGGGGGAGCAGGTGTGGCAAGTGTTAGGAACTCCCTTCTGGTGACAGCTGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR CCA 90 bp GTTTGCTGCGACAAAGGCCTGCATGGCCTACAGAGAAACCCATCCATCCGCAGGGTGCAGTGGGGATCTTaGCTCACTGCAACTTCTGTC +
Preference number: 4 (lower is better)
Translates to: VCCDKGLHGLQRNPSIRRVQWGS*LTATSV
Trigger: GACAGAAGTTGCAGTGAGCCAAGATCCCCACTGCAC...CCTGCGGATGGATGGGTTTCTCTGTAGGCCATGCAGGCCTTTGTCGCAGCAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR CCA 90 bp TGTCACAAGACCCAGACACCTAGGTTCCCAGTTTGGCTGGCCCAAGAGTTCTTCCAGATCCACCAGGCTTaGGACTGGCAAAGGGAGCTG +
Preference number: 4 (lower is better)
Translates to: CHKTQTPRFPVWLAQEFFQIHQA*DWQREL
Trigger: CAGCTCCCTTTGCCAGTCCCAAGCCTGGTGGATCTG...GAAGAACTCTTGGGCCAGCCAAACTGGGAACCTAGGTGTCTGGGTCTTGTGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR CCA 90 bp CCTACAGAGAAACCCATCCATCCGCAGGTGGGGGTGTGGCTTGAAAGACCTGCTGGAAATCCGAGCTCATaGATGAACCCCCTAAGACCG +
Preference number: 4 (lower is better)
Translates to: PTEKPIHPQVGVWLERPAGNPSS*MNPLRP
Trigger: CGGTCTTAGGGGGTTCATCCATGAGCTCGGATTTCC...AGCAGGTCTTTCAAGCCACACCCCCACCTGCGGATGGATGGGTTTCTCTGTAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000432261.6
ENST00000545616.2
3UTR CAA 72 bp TCACCAACCACTGGTGGCTGGTTGTGCTGGTTTTACTaGGCTCAAGGGCTGCTGGGAAGGTTTGCTGCGACA +
Preference number: 4 (lower is better)
Translates to: SPTTGGWLCWFY*AQGLLGRFAAT
Trigger: TGTCGCAGCAAACCTTCCCAGCAGCCCTTGAGCCAAGTAAAACCAGCACAACCAGCCACCAGTGGTTGGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
ENST00000545616.2
3UTR CAA 72 bp CCCAAGGTGGTGCTGAGTGCAGAGTGCAGAGCATTCTaGTGCTCTCCTCTCATGGCTGGAACTATCTGGGCT +
Preference number: 4 (lower is better)
Translates to: PKVVLSAECRAF*CSPLMAGTIWA
Trigger: AGCCCAGATAGTTCCAGCCATGAGAGGAGAGCACAAGAATGCTCTGCACTCTGCACTCAGCACCACCTTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
CDS-3UTR TCA 90 bp TGGGGGTGTGGCTTGAAAGACCTGCTCTTAGTTCCCTTCTTTACCCTCCTGCTTATGAACTTCCCTCCGTaGTCTCCAGGTGACAGCCCC +
Preference number: 4 (lower is better)
Translates to: WGCGLKDLLLVPFFTLLLMNFPP*SPGDSP
Trigger: GGGGCTGTCACCTGGAGATCACGGAGGGAAGTTCAT...AAGCAGGAGGGTAAAGAAGGGAACTAAGAGCAGGTCTTTCAAGCCACACCCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000336095.10
CDS-3UTR TCA 90 bp CAACCACTGGTGGCTGGTTGTGCTGGTTTTACTTGGCTCAAGGGCTGCTGGGAACCTCATGAAGTTTCTTaGGGCAAACCCGCAGGCTCA +
Preference number: 4 (lower is better)
Translates to: QPLVAGCAGFTWLKGCWEPHEVS*GKPAGS
Trigger: TGAGCCTGCGGGTTTGCCTCAAGAAACTTCATGAGG...TTCCCAGCAGCCCTTGAGCCAAGTAAAACCAGCACAACCAGCCACCAGTGGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
ENST00000545616.2
CDS-3UTR TCA 90 bp AAACCCATCCATCCGCAGGTGGGGGTGTGGCTTGAAAGACCTGCTCTTAGTTCCTGCTTGACATGGAGATaGGGCTCCAGGAGAGAGAGT +
Preference number: 4 (lower is better)
Translates to: KPIHPQVGVWLERPALSSCLTWR*GSRRES
Trigger: ACTCTCTCTCCTGGAGCCTCATCTCCATGTCAAGCA...GGAACTAAGAGCAGGTCTTTCAAGCCACACCCCCACCTGCGGATGGATGGGTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
ENST00000545616.2
CDS-3UTR TCA 90 bp GCAGCTGGTGTCCTAGGTAGAGAGCAGCCATACAGACACCACATGTGTTCCTCCCTTTACCCTCCTGCTTaGCATGGAGATGAGGCTCCA +
Preference number: 4 (lower is better)
Translates to: AAGVLGREQPYRHHMCSSLYPPA*HGDEAP
Trigger: TGGAGCCTCATCTCCATGTCAAGCAGGAGGGTAAAG...GGAGGAACACATGTGGTGTCTGTATGGCTGCTCTCTACCTAGGACACCAGCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
ENST00000545616.2
CDS-3UTR TCA 90 bp ATGGAAATTTTCCTCCTCATGCCCAGCCATCTGAACCAAGGACAGGTTCCTTCTACAGTGGCTCCCTTCTaGGGCAGTGGCAGTGGGCTC +
Preference number: 4 (lower is better)
Translates to: MEIFLLMPSHLNQGQVPSTVAPF*GSGSGL
Trigger: GAGCCCACTGCCACTGCCTCAGAAGGGAGCCACTGT...AGAAGGAACCTGTCCTTGGTTCAGATGGCTGGGCATGAGGAGGAAAATTTCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
CDS-3UTR TCA 90 bp GTAGAGAGCAGCCATACAGACACCACATGTGTTCCTCCTGGCTCCACACAGACGTCATGCCCAGCCATCTaGACCAAGGACAGGTTCCTT +
Preference number: 4 (lower is better)
Translates to: VESSHTDTTCVPPGSTQTSCPAI*TKDRFL
Trigger: AAGGAACCTGTCCTTGGTTCAGATGGCTGGGCATGA...CGTCTGTGTGGAGCCAGGAGGAACACATGTGGTGTCTGTATGGCTGCTCTCTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
CDS-3UTR TCA 90 bp ATCAAAGGCATACAACATGAGCCTTGTGGGCACTGCCTCACCAACCACTGGTGGCCGAGGCTATTTCTCTaGTGGATCCAAGGGGCTTGG +
Preference number: 4 (lower is better)
Translates to: IKGIQHEPCGHCLTNHWWPRLFL*WIQGAW
Trigger: CCAAGCCCCTTGGATCCATCAGAGAAATAGCCTCGG...CCACCAGTGGTTGGTGAGGCAGTGCCCACAAGGCTCATGTTGTATGCCTTTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR TCA 90 bp CCAACCACTGGTGGCTGGTTGTGCTGGTTTTACTTGGCTCAAGGGCTGCTGGGAATCAGGCCAGGGAGATaGCATGATTTTGAAGTGGGG +
Preference number: 4 (lower is better)
Translates to: PTTGGWLCWFYLAQGLLGIRPGR*HDFEVG
Trigger: CCCCACTTCAAAATCATGTCATCTCCCTGGCCTGAT...TCCCAGCAGCCCTTGAGCCAAGTAAAACCAGCACAACCAGCCACCAGTGGTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR TCA 90 bp CCAACCACTGGTGGCTGGTTGTGCTGGTTTTACTTGGCTCAAGGGCTGCTGGGAAAGAGCTTGCCTAAGTaGCCACAACAGTTGCAGCCA +
Preference number: 4 (lower is better)
Translates to: PTTGGWLCWFYLAQGLLGKSLPK*PQQLQP
Trigger: TGGCTGCAACTGTTGTGGTCACTTAGGCAAGCTCTT...TCCCAGCAGCCCTTGAGCCAAGTAAAACCAGCACAACCAGCCACCAGTGGTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR TCA 90 bp AGCCAAGATGGCCTTATCAAAGGCATACAACATGAGCCTTGTGGGCACTGCCTCGGCGGGAGGATCACTTaGGTCCAGGAAGTTGAGGCT +
Preference number: 4 (lower is better)
Translates to: SQDGLIKGIQHEPCGHCLGGRIT*VQEVEA
Trigger: AGCCTCAACTTCCTGGACTCAAGTGATCCTCCCGCC...GAGGCAGTGCCCACAAGGCTCATGTTGTATGCCTTTGATAAGGCCATCTTGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR TCA 90 bp GTGGCAGCTGGTGTCCTAGGTAGAGAGCAGCCATACAGACACCACATGTGTTCCCTGGTCTTGAACTCTTaGCCTAAGGTGATCCGCCTG +
Preference number: 4 (lower is better)
Translates to: VAAGVLGREQPYRHHMCSLVLNS*PKVIRL
Trigger: CAGGCGGATCACCTTAGGTCAAGAGTTCAAGACCAG...GGAACACATGTGGTGTCTGTATGGCTGCTCTCTACCTAGGACACCAGCTGCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR TCA 90 bp GCAGCTGGTGTCCTAGGTAGAGAGCAGCCATACAGACACCACATGTGTTCCTCCACTGGCAAAGGGAGCTaGGAAGAGAGTTCCCCCAAA +
Preference number: 4 (lower is better)
Translates to: AAGVLGREQPYRHHMCSSTGKGS*EESSPK
Trigger: TTTGGGGGAACTCTCTTCTCAGCTCCCTTTGCCAGT...GGAGGAACACATGTGGTGTCTGTATGGCTGCTCTCTACCTAGGACACCAGCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR GCA 90 bp TGCTTTGGTTGTCACAAGACCCAGACACCTAGGTTCCCAGTTTGGCTGGCCCAAGCTGCGACAAAGGCCTaGATGGCCTACAGAGAAACC +
Preference number: 4 (lower is better)
Translates to: CFGCHKTQTPRFPVWLAQAATKA*MAYRET
Trigger: GGTTTCTCTGTAGGCCATGCAGGCCTTTGTCGCAGC...TTGGGCCAGCCAAACTGGGAACCTAGGTGTCTGGGTCTTGTGACAACCAAAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
ENST00000545616.2
CDS-3UTR GCA 90 bp AGAAACCCATCCATCCGCAGGTGGGGGTGTGGCTTGAAAGACCTGCTCTTAGTTGCTGCTGGGAAGGTTTaGTGCGACAAAGGCCTGCAT +
Preference number: 4 (lower is better)
Translates to: RNPSIRRWGCGLKDLLLVAAGKV*CDKGLH
Trigger: ATGCAGGCCTTTGTCGCAGCAAACCTTCCCAGCAGC...AACTAAGAGCAGGTCTTTCAAGCCACACCCCCACCTGCGGATGGATGGGTTTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
ENST00000545616.2
CDS-3UTR GCA 90 bp AGAAACCCATCCATCCGCAGGTGGGGGTGTGGCTTGAAAGACCTGCTCTTAGTTACTTGGCTCAAGGGCTaGTGGGAAGGTTTGCTGCGA +
Preference number: 4 (lower is better)
Translates to: RNPSIRRWGCGLKDLLLVTWLKG*WEGLLR
Trigger: TCGCAGCAAACCTTCCCAGCAGCCCTTGAGCCAAGT...AACTAAGAGCAGGTCTTTCAAGCCACACCCCCACCTGCGGATGGATGGGTTTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
ENST00000545616.2
CDS-3UTR GCA 90 bp ACTGGTGGCTGGTTGTGCTGGTTTTACTTGGCTCAAGGGCTGCTGGGAAGGTTTACTTGGCTCAAGGGCTaGTGGGAAGGTTTGCTGCGA +
Preference number: 4 (lower is better)
Translates to: TGGWLCWFYLAQGLLGRFTWLKG*WEGLLR
Trigger: TCGCAGCAAACCTTCCCAGCAGCCCTTGAGCCAAGT...AAACCTTCCCAGCAGCCCTTGAGCCAAGTAAAACCAGCACAACCAGCCACCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
ENST00000545616.2
CDS-3UTR GCA 90 bp ACACCTAGGTTCCCAGTTTGGCTGGCCCAAGAGTTCTTCATGAGGCAAAAGAAGGAGCCTTGTGGGCACTaGCTCACCAACCACTGGTGG +
Preference number: 4 (lower is better)
Translates to: TPRFPVWLAQEFFMRQKKEPCGH*LTNHWW
Trigger: CCACCAGTGGTTGGTGAGGCAGTGCCCACAAGGCTC...CTTCTTTTGCCTCATGAAGAACTCTTGGGCCAGCCAAACTGGGAACCTAGGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
ENST00000545616.2
CDS-3UTR GCA 90 bp CCTCTTCTCTCGGCAGGGGGTAGTGTCAAAGTGCTTTGGTTGTCACAAGACCCAACACTGGAACCACAGTaGACATGTGGGGATGTGGGC +
Preference number: 4 (lower is better)
Translates to: PLLSAGGSVKVLWLSQDPTLEPQ*TCGDVG
Trigger: GCCCACATCCCCACATGTGCACTGTGGTTCCAGTGT...TGGGTCTTGTGACAACCAAAGCACTTTGACACTACCCCCTGCCGAGAGAAGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
CDS-3UTR GCA 90 bp TTGTGCTGGTTTTACTTGGCTCAAGGGCTGCTGGGAAGGTTTGCTGCGACAAAGTGCGCCCTGGTCCAGTaGTACGTATCAACCCCCTCA +
Preference number: 4 (lower is better)
Translates to: LCWFYLAQGLLGRFAATKCALVQ*YVSTPS
Trigger: TGAGGGGGTTGATACGTAGCACTGGACCAGGGCGCA...CTTTGTCGCAGCAAACCTTCCCAGCAGCCCTTGAGCCAAGTAAAACCAGCACAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
CDS-3UTR GCA 90 bp GTTTGCTGCGACAAAGGCCTGCATGGCCTACAGAGAAACCCATCCATCCGCAGGTGCAGAGCATTCTTGTaGTCTCCTCTCATGGCTGGA +
Preference number: 4 (lower is better)
Translates to: VCCDKGLHGLQRNPSIRRCRAFL*SPLMAG
Trigger: TCCAGCCATGAGAGGAGAGCACAAGAATGCTCTGCA...CCTGCGGATGGATGGGTTTCTCTGTAGGCCATGCAGGCCTTTGTCGCAGCAAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
CDS-3UTR GCA 90 bp GCTGGGAAGGTTTGCTGCGACAAAGGCCTGCATGGCCTACAGAGAAACCCATCCGTGCTGAGTGCAGAGTaGAGAGCATTCTTGTGCTCT +
Preference number: 4 (lower is better)
Translates to: AGKVCCDKGLHGLQRNPSVLSAE*RAFLCS
Trigger: AGAGCACAAGAATGCTCTGCACTCTGCACTCAGCAC...GGATGGGTTTCTCTGTAGGCCATGCAGGCCTTTGTCGCAGCAAACCTTCCCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
CDS-3UTR GCA 90 bp GCAGGAACTACTGCTAGTGATACTAGGCTTGCTGCAGGAGGATGTCACGCTGAGGGTGGAGGACCCAGATaGAGGGAGCAAATATTCGGG +
Preference number: 4 (lower is better)
Translates to: AGTTASDTRLAAGGCHAEGGGPR*REQIFG
Trigger: CCCGAATATTTGCTCCCTGCATCTGGGTCCTCCACC...CTCAGCGTGACATCCTCCTGCAGCAAGCCTAGTATCACTAGCAGTAGTTCCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
CDS-3UTR GCA 90 bp AATACTGAGGCACACACCAACGGTGGACAGCCCTGCAGGAGCTTCCTGAAACTATGGCCATTTCTGTCCTaGCTTCCCTGGCTAGGCAAG +
Preference number: 4 (lower is better)
Translates to: NTEAHTNGGQPCRSFLKLWPFLS*LPWLGK
Trigger: CTTGCCTAGCCAGGGAAGGCAGGACAGAAATGGCCA...TAGTTTCAGGAAGCTCCTGCAGGGCTGTCCACCGTTGGTGTGTGCCTCAGTATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR GCA 90 bp GGGCCAAACTACAAGACGAAAAAGTGCCCCGTTCCTGGCAATGATGTCAGAAGAAGCTGTCCAGGCACCTaGAGAGGCTGCTCAGAGCTG +
Preference number: 4 (lower is better)
Translates to: GPNYKTKKCPVPGNDVRRSCPGT*RGCSEL
Trigger: CAGCTCTGAGCAGCCTCTGCAGGTGCCTGGACAGCT...TCTTCTGACATCATTGCCAGGAACGGGGCACTTTTTCGTCTTGTAGTTTGGCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR GCA 90 bp GCTGAGAAGGTTGTTAGTGGTCCCTCATCTGGGCAAAGCAGACCCAAGGTGGTGCTCGGCCTCCCAAAGTaGTGGGATGTTGGGATTACA +
Preference number: 4 (lower is better)
Translates to: AEKVVSGPSSGQSRPKVVLGLPK*WDVGIT
Trigger: TGTAATCCCAACATCCCAGCACTTTGGGAGGCCGAG...CACCACCTTGGGTCTGCTTTGCCCAGATGAGGGACCACTAACAACCTTCTCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR GCA 90 bp TTGTGCTGGTTTTACTTGGCTCAAGGGCTGCTGGGAAGGTTTGCTGCGACAAAGTTGCCCAGGCTGGAGTaGAGTGGGGATCTTGGCTCA +
Preference number: 4 (lower is better)
Translates to: LCWFYLAQGLLGRFAATKLPRLE*SGDLGS
Trigger: TGAGCCAAGATCCCCACTGCACTCCAGCCTGGGCAA...CTTTGTCGCAGCAAACCTTCCCAGCAGCCCTTGAGCCAAGTAAAACCAGCACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR CCA 90 bp CAACCACTGGTGGCTGGTTGTGCTGGTTTTACTTGGCTCAAGGGCTGCTGGGAATGCTTACTGTGCAACTaGGCCAGCTGTAGAACTGGC +
Preference number: 4 (lower is better)
Translates to: QPLVAGCAGFTWLKGCWECLLCN*ASCRTG
Trigger: GCCAGTTCTACAGCTGGCCCAGTTGCACAGTAAGCA...TTCCCAGCAGCCCTTGAGCCAAGTAAAACCAGCACAACCAGCCACCAGTGGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
ENST00000545616.2
CDS-3UTR CCA 90 bp CAGGTGGGGGTGTGGCTTGAAAGACCTGCTCTTAGTTCCCTTCTTTACCCTCCTCACATGTGTTCCTCCTaGCTCCACACAGACGTCGTG +
Preference number: 4 (lower is better)
Translates to: QVGVWLERPALSSLLYPPHMCSS*LHTDVV
Trigger: CACGACGTCTGTGTGGAGCCAGGAGGAACACATGTG...AGGAGGGTAAAGAAGGGAACTAAGAGCAGGTCTTTCAAGCCACACCCCCACCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
ENST00000545616.2
CDS-3UTR CCA 90 bp AGAAACCCATCCATCCGCAGGTGGGGGTGTGGCTTGAAAGACCTGCTCTTAGTTCACATGTGTTCCTCCTaGCTCCACACAGACGTCGTG +
Preference number: 4 (lower is better)
Translates to: RNPSIRRWGCGLKDLLLVHMCSS*LHTDVV
Trigger: CACGACGTCTGTGTGGAGCCAGGAGGAACACATGTG...AACTAAGAGCAGGTCTTTCAAGCCACACCCCCACCTGCGGATGGATGGGTTTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
ENST00000545616.2
CDS-3UTR CCA 90 bp AAACCCATCCATCCGCAGGTGGGGGTGTGGCTTGAAAGACCTGCTCTTAGTTCCCGACAAAGGCCTGCATaGCCTACAGAGAAACCCATC +
Preference number: 4 (lower is better)
Translates to: KPIHPQVGVWLERPALSSRQRPA*PTEKPI
Trigger: GATGGGTTTCTCTGTAGGCCATGCAGGCCTTTGTCG...GGAACTAAGAGCAGGTCTTTCAAGCCACACCCCCACCTGCGGATGGATGGGTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
ENST00000545616.2
CDS-3UTR CCA 90 bp GTGGCAGCTGGTGTCCTAGGTAGAGAGCAGCCATACAGACACCACATGTGTTCCCGACAAAGGCCTGCATaGCCTACAGAGAAACCCATC +
Preference number: 4 (lower is better)
Translates to: VAAGVLGREQPYRHHMCSRQRPA*PTEKPI
Trigger: GATGGGTTTCTCTGTAGGCCATGCAGGCCTTTGTCG...GGAACACATGTGGTGTCTGTATGGCTGCTCTCTACCTAGGACACCAGCTGCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
ENST00000545616.2
CDS-3UTR CCA 90 bp CAACCACTGGTGGCTGGTTGTGCTGGTTTTACTTGGCTCAAGGGCTGCTGGGAAATCCTGAGGGGGAAATaGGTGACGAGGAACACTGCT +
Preference number: 4 (lower is better)
Translates to: QPLVAGCAGFTWLKGCWEILRGK*VTRNTA
Trigger: AGCAGTGTTCCTCGTCACCCATTTCCCCCTCAGGAT...TTCCCAGCAGCCCTTGAGCCAAGTAAAACCAGCACAACCAGCCACCAGTGGTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
CDS-3UTR CCA 90 bp GCATGGCCTACAGAGAAACCCATCCATCCGCAGGTGGGGGTGTGGCTTGAAAGATCACAGCAGCTACACTaGAACCACAGTGCACATGTG +
Preference number: 4 (lower is better)
Translates to: AWPTEKPIHPQVGVWLERSQQLH*NHSAHV
Trigger: CACATGTGCACTGTGGTTCCAGTGTAGCTGCTGTGA...TCTTTCAAGCCACACCCCCACCTGCGGATGGATGGGTTTCTCTGTAGGCCATGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
CDS-3UTR CCA 90 bp TGTCACAAGACCCAGACACCTAGGTTCCCAGTTTGGCTGGCCCAAGAGTTCTTCTCGAGAGGTTCACAGTaGCTCCCTTCTGAGGCAGTG +
Preference number: 4 (lower is better)
Translates to: CHKTQTPRFPVWLAQEFFSRGSQ*LPSEAV
Trigger: CACTGCCTCAGAAGGGAGCCACTGTGAACCTCTCGA...GAAGAACTCTTGGGCCAGCCAAACTGGGAACCTAGGTGTCTGGGTCTTGTGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
CDS-3UTR CCA 90 bp TGCTTTGGTTGTCACAAGACCCAGACACCTAGGTTCCCAGTTTGGCTGGCCCAATCGAGAGGTTCACAGTaGCTCCCTTCTGAGGCAGTG +
Preference number: 4 (lower is better)
Translates to: CFGCHKTQTPRFPVWLAQSRGSQ*LPSEAV
Trigger: CACTGCCTCAGAAGGGAGCCACTGTGAACCTCTCGA...TTGGGCCAGCCAAACTGGGAACCTAGGTGTCTGGGTCTTGTGACAACCAAAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
CDS-3UTR CCA 90 bp AAGGCATACAACATGAGCCTTGTGGGCACTGCCTCACCAACCACTGGTGGCTGGAAAGCCACTGCTCTTTaGAGCCACTCGAGAGGTTCA +
Preference number: 4 (lower is better)
Translates to: KAYNMSLVGTASPTTGGWKATAL*SHSRGS
Trigger: TGAACCTCTCGAGTGGCTCCAAAGAGCAGTGGCTTT...CCAGCCACCAGTGGTTGGTGAGGCAGTGCCCACAAGGCTCATGTTGTATGCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
CDS-3UTR CCA 90 bp AAGGTTTGCTGCGACAAAGGCCTGCATGGCCTACAGAGAAACCCATCCATCCGCCTCACACCTGTGGGATaGAGTGGAGCAAAGCAGTTG +
Preference number: 4 (lower is better)
Translates to: KVCCDKGLHGLQRNPSIRLTPVG*SGAKQL
Trigger: CAACTGCTTTGCTCCACTCCATCCCACAGGTGTGAG...GCGGATGGATGGGTTTCTCTGTAGGCCATGCAGGCCTTTGTCGCAGCAAACCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
CDS-3UTR CCA 90 bp AATACTGAGGCACACACCAACGGTGGACAGCCCTGCAGGAGCTTCCTGAAACTAATGGCTGGAACTATCTaGGCTTTGCGCCCTGGTCCA +
Preference number: 4 (lower is better)
Translates to: NTEAHTNGGQPCRSFLKLMAGTI*ALRPGP
Trigger: TGGACCAGGGCGCAAAGCCCAGATAGTTCCAGCCAT...TAGTTTCAGGAAGCTCCTGCAGGGCTGTCCACCGTTGGTGTGTGCCTCAGTATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
CDS-3UTR CCA 90 bp AAGGTTTGCTGCGACAAAGGCCTGCATGGCCTACAGAGAAACCCATCCATCCGCCTCTCCTCTCATGGCTaGAACTATCTGGGCTTTGCG +
Preference number: 4 (lower is better)
Translates to: KVCCDKGLHGLQRNPSIRLSSHG*NYLGFA
Trigger: CGCAAAGCCCAGATAGTTCCAGCCATGAGAGGAGAG...GCGGATGGATGGGTTTCTCTGTAGGCCATGCAGGCCTTTGTCGCAGCAAACCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
CDS-3UTR CCA 90 bp AAGGCATACAACATGAGCCTTGTGGGCACTGCCTCACCAACCACTGGTGGCTGGAGGGTGACTTTACCATaGGGTTCGAGTCTGAGCCAA +
Preference number: 4 (lower is better)
Translates to: KAYNMSLVGTASPTTGGWRVTLP*GSSLSQ
Trigger: TTGGCTCAGACTCGAACCCCATGGTAAAGTCACCCT...CCAGCCACCAGTGGTTGGTGAGGCAGTGCCCACAAGGCTCATGTTGTATGCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR CCA 90 bp TCAGTTGTACCCCTAGCAACTACTAATGGTTCAGCCACCCGTGGAGTCCAGTTGAGTACACCAGGGAGGTaGGTGTGGACAGAGGCACTG +
Preference number: 4 (lower is better)
Translates to: SVVPLATTNGSATRGVQLSTPGR*VWTEAL
Trigger: CAGTGCCTCTGTCCACACCCACCTCCCTGGTGTACT...CAACTGGACTCCACGGGTGGCTGAACCATTAGTAGTTGCTAGGGGTACAACTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR CCA 90 bp AGGAGGGGGAGAGGCCAAAGGGTCGGCATTCCCTTCATCCAGCCGGGCCAGAAGAAAGGTGCTGATGCTTaGTCAAAAAGTGGAGTACAT +
Preference number: 4 (lower is better)
Translates to: RRGRGQRVGIPFIQPGQKKGADA*SKSGVH
Trigger: ATGTACTCCACTTTTTGACCAAGCATCAGCACCTTT...CTTCTGGCCCGGCTGGATGAAGGGAATGCCGACCCTTTGGCCTCTCCCCCTCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
3UTR CAA 72 bp CAGAGAAACCCATCCATCCGCAGGTGGGGGTGTGGCTaGAAAGACCTGCTCTTAGTTCCCTTCTTTACCCTC +
Preference number: 4 (lower is better)
Translates to: QRNPSIRRWGCG*KDLLLVPFFTL
Trigger: GAGGGTAAAGAAGGGAACTAAGAGCAGGTCTTTCAAGCCACACCCCCACCTGCGGATGGATGGGTTTCTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
ENST00000545616.2
3UTR CAA 72 bp GCTGGTTTTACTTGGCTCAAGGGCTGCTGGGAAGGTTaGCTGCGACAAAGGCCTGCATGGCCTACAGAGAAA +
Preference number: 4 (lower is better)
Translates to: AGFTWLKGCWEG*LRQRPAWPTEK
Trigger: TTTCTCTGTAGGCCATGCAGGCCTTTGTCGCAGCAAACCTTCCCAGCAGCCCTTGAGCCAAGTAAAACCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
ENST00000545616.2
CDS-3UTR TCA 90 bp GGATGTGGGCAGCCTCCTGGATCACTCAGGGACAGTGTGGACTCAGGGCCCACTCCACAATATATATGTTaGGAGGCAGATTCTGGAATC +
Preference number: 4 (lower is better)
Translates to: GCGQPPGSLRDSVDSGPTPQYIC*EADSGI
Trigger: GATTCCAGAATCTGCCTCTCAACATATATATTGTGG...AGTGGGCCCTGAGTCCACACTGTCCCTGAGTGATCCAGGAGGCTGCCCACATCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
CDS-3UTR TCA 90 bp CATCCGCAGGTGGGGGTGTGGCTTGAAAGACCTGCTCTTAGTTCCCTTCTTTACTGCTTGACATGGAGATaGGGCTCCAGGAGAGAGAGT +
Preference number: 4 (lower is better)
Translates to: HPQVGVWLERPALSSLLYCLTWR*GSRRES
Trigger: ACTCTCTCTCCTGGAGCCTCATCTCCATGTCAAGCA...GTAAAGAAGGGAACTAAGAGCAGGTCTTTCAAGCCACACCCCCACCTGCGGATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
ENST00000545616.2
CDS-3UTR TCA 90 bp TGTCACAAGACCCAGACACCTAGGTTCCCAGTTTGGCTGGCCCAAGAGTTCTTCCTTTACCCTCCTGCTTaGCATGGAGATGAGGCTCCA +
Preference number: 4 (lower is better)
Translates to: CHKTQTPRFPVWLAQEFFLYPPA*HGDEAP
Trigger: TGGAGCCTCATCTCCATGTCAAGCAGGAGGGTAAAG...GAAGAACTCTTGGGCCAGCCAAACTGGGAACCTAGGTGTCTGGGTCTTGTGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
ENST00000545616.2
CDS-3UTR TCA 90 bp TTCTCAAAAAGCCACTGCTCTTTGGAGCCACTCGAGAGGTTCACAGTGGCTCCCAGAGGAAATGGCTTCTaGCTAGGCCTTTCCAAGCGC +
Preference number: 4 (lower is better)
Translates to: FSKSHCSLEPLERFTVAPRGNGF*LGLSKR
Trigger: GCGCTTGGAAAGGCCTAGTCAGAAGCCATTTCCTCT...GGGAGCCACTGTGAACCTCTCGAGTGGCTCCAAAGAGCAGTGGCTTTTTGAGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
CDS-3UTR TCA 90 bp ACCAGCTGTCACCAGAAGGGAGTTCCTAACACTTGCCACACCTGCTCCCCCGACCCTGCAGGAGCTTCCTaGAACTATCTACAATTCCAA +
Preference number: 4 (lower is better)
Translates to: TSCHQKGVPNTCHTCSPDPAGAS*NYLQFQ
Trigger: TTGGAATTGTAGATAGTTTCAGGAAGCTCCTGCAGG...GTCGGGGGAGCAGGTGTGGCAAGTGTTAGGAACTCCCTTCTGGTGACAGCTGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR TCA 90 bp GCACTGGGGAAAAGGATCTTCTTGTCAAGAACAGGGTATCCGGCAATGGTGGGACGGAAGTCCAAATACTaGGGCACACACCAACGGTGG +
Preference number: 4 (lower is better)
Translates to: ALGKRIFLSRTGYPAMVGRKSKY*GTHQRW
Trigger: CCACCGTTGGTGTGTGCCTCAGTATTTGGACTTCCG...TCCCACCATTGCCGGATACCCTGTTCTTGACAAGAAGATCCTTTTCCCCAGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR TCA 90 bp ACCCTCATGAAGTTTCTTGAGGCAAACCCGCAGGCTCATCCACTCCTCTTCTCTCGGAAGTCCAAATACTaGGGCACACACCAACGGTGG +
Preference number: 4 (lower is better)
Translates to: TLMKFLEANPQAHPLLFSRKSKY*GTHQRW
Trigger: CCACCGTTGGTGTGTGCCTCAGTATTTGGACTTCCG...AGAGAAGAGGAGTGGATGAGCCTGCGGGTTTGCCTCAAGAAACTTCATGAGGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
CDS-3UTR TCA 90 bp CAACCACTGGTGGCTGGTTGTGCTGGTTTTACTTGGCTCAAGGGCTGCTGGGAATTTGAAGTGGGGTTGTaGAAAAGGACAAGGCCCGAG +
Preference number: 4 (lower is better)
Translates to: QPLVAGCAGFTWLKGCWEFEVGL*KRTRPE
Trigger: CTCGGGCCTTGTCCTTTTTCACAACCCCACTTCAAA...TTCCCAGCAGCCCTTGAGCCAAGTAAAACCAGCACAACCAGCCACCAGTGGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR TCA 90 bp CGCAGGTGGGGGTGTGGCTTGAAAGACCTGCTCTTAGTTCCCTTCTTTACCCTCATCAGGCCAGGGAGATaGCATGATTTTGAAGTGGGG +
Preference number: 4 (lower is better)
Translates to: RRWGCGLKDLLLVPFFTLIRPGR*HDFEVG
Trigger: CCCCACTTCAAAATCATGTCATCTCCCTGGCCTGAT...GAGGGTAAAGAAGGGAACTAAGAGCAGGTCTTTCAAGCCACACCCCCACCTGCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR TCA 90 bp TGTGGGCACTGCCTCACCAACCACTGGTGGCTGGTTGTGCTGGTTTTACTTGGCTGTTCCTATCAATCATaGTGGCAGAGGAGCCCATGT +
Preference number: 4 (lower is better)
Translates to: CGHCLTNHWWLVVLVLLGCSYQS*WQRSPC
Trigger: ACATGGGCTCCTCTGCCATCATGATTGATAGGAACA...GCCAAGTAAAACCAGCACAACCAGCCACCAGTGGTTGGTGAGGCAGTGCCCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR TCA 90 bp GCTGCGACAAAGGCCTGCATGGCCTACAGAGAAACCCATCCATCCGCAGGTGGGGTGTACATGCATAAATaGTCTCTGGAAGGATACCCA +
Preference number: 4 (lower is better)
Translates to: AATKACMAYRETHPSAGGVYMHK*SLEGYP
Trigger: TGGGTATCCTTCCAGAGATCATTTATGCATGTACAC...CCCACCTGCGGATGGATGGGTTTCTCTGTAGGCCATGCAGGCCTTTGTCGCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR TCA 90 bp GCAGCTGGTGTCCTAGGTAGAGAGCAGCCATACAGACACCACATGTGTTCCTCCTCAGGCATATCCACATaGGACTCACTGTGCACTTGC +
Preference number: 4 (lower is better)
Translates to: AAGVLGREQPYRHHMCSSSGIST*DSLCTC
Trigger: GCAAGTGCACAGTGAGTCTCATGTGGATATGCCTGA...GGAGGAACACATGTGGTGTCTGTATGGCTGCTCTCTACCTAGGACACCAGCTGC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR TCA 90 bp CATTCTCCATGTCACGCAGACTGTATTCCTAATGAAAAACTTCCCCCACTCACAGGCGGGAGAATGGCGTaGACCTGGGAGGCGGAGCTT +
Preference number: 4 (lower is better)
Translates to: HSPCHADCIPNEKLPPLTGGRMA*TWEAEL
Trigger: AAGCTCCGCCTCCCAGGTTCACGCCATTCTCCCGCC...TGTGAGTGGGGGAAGTTTTTCATTAGGAATACAGTCTGCGTGACATGGAGAATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR GCA 90 bp TCAGTTGTACCCCTAGCAACTACTAATGGTTCAGCCACCCGTGGAGTCCAGTTGCTATACAATGTTCTCTaGCCCAGGAAGGGGCCCCTG +
Preference number: 4 (lower is better)
Translates to: SVVPLATTNGSATRGVQLLYNVL*PRKGPL
Trigger: CAGGGGCCCCTTCCTGGGGCAGAGAACATTGTATAG...CAACTGGACTCCACGGGTGGCTGAACCATTAGTAGTTGCTAGGGGTACAACTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR GCA 90 bp ACCCTCATGAAGTTTCTTGAGGCAAACCCGCAGGCTCATCCACTCCTCTTCTCTCTATACAATGTTCTCTaGCCCAGGAAGGGGCCCCTG +
Preference number: 4 (lower is better)
Translates to: TLMKFLEANPQAHPLLFSLYNVL*PRKGPL
Trigger: CAGGGGCCCCTTCCTGGGGCAGAGAACATTGTATAG...AGAGAAGAGGAGTGGATGAGCCTGCGGGTTTGCCTCAAGAAACTTCATGAGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
ENST00000545616.2
CDS-3UTR GCA 90 bp GTTTGCTGCGACAAAGGCCTGCATGGCCTACAGAGAAACCCATCCATCCGCAGGGGGGTAGTGTCAAAGTaGTTTGGTTGTCACAAGACC +
Preference number: 4 (lower is better)
Translates to: VCCDKGLHGLQRNPSIRRGVVSK*FGCHKT
Trigger: GGTCTTGTGACAACCAAAGCACTTTGACACTACCCC...CCTGCGGATGGATGGGTTTCTCTGTAGGCCATGCAGGCCTTTGTCGCAGCAAAC
53% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
ENST00000545616.2
CDS-3UTR GCA 90 bp TCAGTTGTACCCCTAGCAACTACTAATGGTTCAGCCACCCGTGGAGTCCAGTTGGCTGCGACAAAGGCCTaGATGGCCTACAGAGAAACC +
Preference number: 4 (lower is better)
Translates to: SVVPLATTNGSATRGVQLAATKA*MAYRET
Trigger: GGTTTCTCTGTAGGCCATGCAGGCCTTTGTCGCAGC...CAACTGGACTCCACGGGTGGCTGAACCATTAGTAGTTGCTAGGGGTACAACTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR GCA 90 bp CCTACAGAGAAACCCATCCATCCGCAGGTGGGGGTGTGGCTTGAAAGACCTGCTACTGGTGGCTGGTTGTaGTGGTTTTACTTGGCTCAA +
Preference number: 4 (lower is better)
Translates to: PTEKPIHPQVGVWLERPATGGWL*WFYLAQ
Trigger: TTGAGCCAAGTAAAACCAGCACAACCAGCCACCAGT...AGCAGGTCTTTCAAGCCACACCCCCACCTGCGGATGGATGGGTTTCTCTGTAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
ENST00000545616.2
CDS-3UTR GCA 90 bp GCATGGCCTACAGAGAAACCCATCCATCCGCAGGTGGGGGTGTGGCTTGAAAGAACTGGTGGCTGGTTGTaGTGGTTTTACTTGGCTCAA +
Preference number: 4 (lower is better)
Translates to: AWPTEKPIHPQVGVWLERTGGWL*WFYLAQ
Trigger: TTGAGCCAAGTAAAACCAGCACAACCAGCCACCAGT...TCTTTCAAGCCACACCCCCACCTGCGGATGGATGGGTTTCTCTGTAGGCCATGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
ENST00000545616.2
CDS-3UTR GCA 90 bp CGCAGGTGGGGGTGTGGCTTGAAAGACCTGCTCTTAGTTCCCTTCTTTACCCTCGGTGACGAGGAACACTaGTACTCAAAGCCAAGATGG +
Preference number: 4 (lower is better)
Translates to: RRWGCGLKDLLLVPFFTLGDEEH*YSKPRW
Trigger: CCATCTTGGCTTTGAGTAGCAGTGTTCCTCGTCACC...GAGGGTAAAGAAGGGAACTAAGAGCAGGTCTTTCAAGCCACACCCCCACCTGCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
CDS-3UTR GCA 90 bp AGCCAAGATGGCCTTATCAAAGGCATACAACATGAGCCTTGTGGGCACTGCCTCACACTGGAACCACAGTaGACATGTGGGGATGTGGGC +
Preference number: 4 (lower is better)
Translates to: SQDGLIKGIQHEPCGHCLTLEPQ*TCGDVG
Trigger: GCCCACATCCCCACATGTGCACTGTGGTTCCAGTGT...GAGGCAGTGCCCACAAGGCTCATGTTGTATGCCTTTGATAAGGCCATCTTGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
CDS-3UTR GCA 90 bp CTGCCTCACCAACCACTGGTGGCTGGTTGTGCTGGTTTTACTTGGCTCAAGGGCTTCTCAAAAAGCCACTaGTCTTTGGAGCCACTCGAG +
Preference number: 4 (lower is better)
Translates to: LPHQPLVAGCAGFTWLKGFSKSH*SLEPLE
Trigger: CTCGAGTGGCTCCAAAGAGCAGTGGCTTTTTGAGAA...GCCCTTGAGCCAAGTAAAACCAGCACAACCAGCCACCAGTGGTTGGTGAGGCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
CDS-3UTR GCA 90 bp ACTGGTGGCTGGTTGTGCTGGTTTTACTTGGCTCAAGGGCTGCTGGGAAGGTTTAACGGTGGACAGCCCTaGAGGAGCTTCCTGAAACTA +
Preference number: 4 (lower is better)
Translates to: TGGWLCWFYLAQGLLGRFNGGQP*RSFLKL
Trigger: TAGTTTCAGGAAGCTCCTGCAGGGCTGTCCACCGTT...AAACCTTCCCAGCAGCCCTTGAGCCAAGTAAAACCAGCACAACCAGCCACCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
CDS-3UTR GCA 90 bp GCTGAGAAGGTTGTTAGTGGTCCCTCATCTGGGCAAAGCAGACCCAAGGTGGTGCAAGGTGGTGCTGAGTaGAGAGTGCAGAGCATTCTT +
Preference number: 4 (lower is better)
Translates to: AEKVVSGPSSGQSRPKVVQGGAE*RVQSIL
Trigger: AAGAATGCTCTGCACTCTGCACTCAGCACCACCTTG...CACCACCTTGGGTCTGCTTTGCCCAGATGAGGGACCACTAACAACCTTCTCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
CDS-3UTR GCA 90 bp AAAAGTGCCCCGTTCCTGGCAATGATGTCAGAAGACCAAGAGGCGATAGTTACCAGAGGCCTGTGCCACTaGTGTCAGCTACAGAGCCTG +
Preference number: 4 (lower is better)
Translates to: KSAPFLAMMSEDQEAIVTRGLCH*CQLQSL
Trigger: CAGGCTCTGTAGCTGACAGCAGTGGCACAGGCCTCT...GGTAACTATCGCCTCTTGGTCTTCTGACATCATTGCCAGGAACGGGGCACTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR GCA 90 bp GGCCTACAGAGAAACCCATCCATCCGCAGGTGGGGGTGTGGCTTGAAAGACCTGGACTCACTGTGCACTTaGTCAGTAGCTAAGATGTCT +
Preference number: 4 (lower is better)
Translates to: GLQRNPSIRRWGCGLKDLDSLCT*SVAKMS
Trigger: AGACATCTTAGCTACTGAGCAAGTGCACAGTGAGTC...CAGGTCTTTCAAGCCACACCCCCACCTGCGGATGGATGGGTTTCTCTGTAGGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR CCA 90 bp GGCCTACAGAGAAACCCATCCATCCGCAGGTGGGGGTGTGGCTTGAAAGACCTGCCTGAAGTTGTAATGTaGGAAATCCGAGCTCATGGA +
Preference number: 4 (lower is better)
Translates to: GLQRNPSIRRWGCGLKDLPEVVM*EIRAHG
Trigger: TCCATGAGCTCGGATTTCCCACATTACAACTTCAGG...CAGGTCTTTCAAGCCACACCCCCACCTGCGGATGGATGGGTTTCTCTGTAGGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
ENST00000545616.2
CDS-3UTR CCA 90 bp CGCAGGTGGGGGTGTGGCTTGAAAGACCTGCTCTTAGTTCCCTTCTTTACCCTCGAAGGCGTGCTTACATaGGCAAATCCCCAACTCATC +
Preference number: 4 (lower is better)
Translates to: RRWGCGLKDLLLVPFFTLEGVLT*ANPQLI
Trigger: GATGAGTTGGGGATTTGCCCATGTAAGCACGCCTTC...GAGGGTAAAGAAGGGAACTAAGAGCAGGTCTTTCAAGCCACACCCCCACCTGCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
ENST00000545616.2
CDS-3UTR CCA 90 bp GCTGGGAAGGTTTGCTGCGACAAAGGCCTGCATGGCCTACAGAGAAACCCATCCATAAGGCACTTTCTGTaGAAGGCGTGCTTACATGGG +
Preference number: 4 (lower is better)
Translates to: AGKVCCDKGLHGLQRNPSIRHFL*KACLHG
Trigger: CCCATGTAAGCACGCCTTCCACAGAAAGTGCCTTAT...GGATGGGTTTCTCTGTAGGCCATGCAGGCCTTTGTCGCAGCAAACCTTCCCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
ENST00000545616.2
CDS-3UTR CCA 90 bp TGCTTTGGTTGTCACAAGACCCAGACACCTAGGTTCCCAGTTTGGCTGGCCCAATGCTTACTGTGCAACTaGGCCAGCTGTAGAACTGGC +
Preference number: 4 (lower is better)
Translates to: CFGCHKTQTPRFPVWLAQCLLCN*ASCRTG
Trigger: GCCAGTTCTACAGCTGGCCCAGTTGCACAGTAAGCA...TTGGGCCAGCCAAACTGGGAACCTAGGTGTCTGGGTCTTGTGACAACCAAAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
ENST00000545616.2
CDS-3UTR CCA 90 bp ACCCTCATGAAGTTTCTTGAGGCAAACCCGCAGGCTCATCCACTCCTCTTCTCTCACATGTGTTCCTCCTaGCTCCACACAGACGTCGTG +
Preference number: 4 (lower is better)
Translates to: TLMKFLEANPQAHPLLFSHMCSS*LHTDVV
Trigger: CACGACGTCTGTGTGGAGCCAGGAGGAACACATGTG...AGAGAAGAGGAGTGGATGAGCCTGCGGGTTTGCCTCAAGAAACTTCATGAGGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
ENST00000545616.2
CDS-3UTR CCA 90 bp CATCCACTCCTCTTCTCTCGGCAGGGGGTAGTGTCAAAGTGCTTTGGTTGTCACCCTAGGTTCCCAGTTTaGCTGGCCCAAGAGTTCTTC +
Preference number: 4 (lower is better)
Translates to: HPLLFSRQGVVSKCFGCHPRFPV*LAQEFF
Trigger: GAAGAACTCTTGGGCCAGCCAAACTGGGAACCTAGG...GTGACAACCAAAGCACTTTGACACTACCCCCTGCCGAGAGAAGAGGAGTGGATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
ENST00000545616.2
CDS-3UTR CCA 90 bp CCACTCCTCTTCTCTCGGCAGGGGGTAGTGTCAAAGTGCTTTGGTTGTCACAAGCGACAAAGGCCTGCATaGCCTACAGAGAAACCCATC +
Preference number: 4 (lower is better)
Translates to: PLLFSRQGVVSKCFGCHKRQRPA*PTEKPI
Trigger: GATGGGTTTCTCTGTAGGCCATGCAGGCCTTTGTCG...CTTGTGACAACCAAAGCACTTTGACACTACCCCCTGCCGAGAGAAGAGGAGTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
ENST00000545616.2
CDS-3UTR CCA 90 bp AGCCAAGATGGCCTTATCAAAGGCATACAACATGAGCCTTGTGGGCACTGCCTCTGGCTCAAGGGCTGCTaGGAAGGTTTGCTGCGACAA +
Preference number: 4 (lower is better)
Translates to: SQDGLIKGIQHEPCGHCLWLKGC*EGLLRQ
Trigger: TTGTCGCAGCAAACCTTCCCAGCAGCCCTTGAGCCA...GAGGCAGTGCCCACAAGGCTCATGTTGTATGCCTTTGATAAGGCCATCTTGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
CDS-3UTR CCA 90 bp AAACCCATCCATCCGCAGGTGGGGGTGTGGCTTGAAAGACCTGCTCTTAGTTCCTGTGCTGGTTTTACTTaGCTCAAGGGCTGCTGGGAA +
Preference number: 4 (lower is better)
Translates to: KPIHPQVGVWLERPALSSCAGFT*LKGCWE
Trigger: TTCCCAGCAGCCCTTGAGCCAAGTAAAACCAGCACA...GGAACTAAGAGCAGGTCTTTCAAGCCACACCCCCACCTGCGGATGGATGGGTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
ENST00000545616.2
CDS-3UTR CCA 90 bp CAACCACTGGTGGCTGGTTGTGCTGGTTTTACTTGGCTCAAGGGCTGCTGGGAATGTGCTGGTTTTACTTaGCTCAAGGGCTGCTGGGAA +
Preference number: 4 (lower is better)
Translates to: QPLVAGCAGFTWLKGCWECAGFT*LKGCWE
Trigger: TTCCCAGCAGCCCTTGAGCCAAGTAAAACCAGCACA...TTCCCAGCAGCCCTTGAGCCAAGTAAAACCAGCACAACCAGCCACCAGTGGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
ENST00000545616.2
CDS-3UTR CCA 90 bp GCACTGCCTCACCAACCACTGGTGGCTGGTTGTGCTGGTTTTACTTGGCTCAAGCCAACCACTGGTGGCTaGTTGTGCTGGTTTTACTTG +
Preference number: 4 (lower is better)
Translates to: ALPHQPLVAGCAGFTWLKPTTGG*LCWFYL
Trigger: CAAGTAAAACCAGCACAACCAGCCACCAGTGGTTGG...CTTGAGCCAAGTAAAACCAGCACAACCAGCCACCAGTGGTTGGTGAGGCAGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
ENST00000545616.2
CDS-3UTR CCA 90 bp CAACCACTGGTGGCTGGTTGTGCTGGTTTTACTTGGCTCAAGGGCTGCTGGGAACTCACCAACCACTGGTaGCTGGTTGTGCTGGTTTTA +
Preference number: 4 (lower is better)
Translates to: QPLVAGCAGFTWLKGCWELTNHW*LVVLVL
Trigger: TAAAACCAGCACAACCAGCCACCAGTGGTTGGTGAG...TTCCCAGCAGCCCTTGAGCCAAGTAAAACCAGCACAACCAGCCACCAGTGGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
ENST00000545616.2
CDS-3UTR CCA 90 bp CATCCACTCCTCTTCTCTCGGCAGGGGGTAGTGTCAAAGTGCTTTGGTTGTCACCTGGACGGGCCTTACTaGTGCATAGGAGAGGGAAAT +
Preference number: 4 (lower is better)
Translates to: HPLLFSRQGVVSKCFGCHLDGPY*CIGEGN
Trigger: ATTTCCCTCTCCTATGCACCAGTAAGGCCCGTCCAG...GTGACAACCAAAGCACTTTGACACTACCCCCTGCCGAGAGAAGAGGAGTGGATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
CDS-3UTR CCA 90 bp AATACTGAGGCACACACCAACGGTGGACAGCCCTGCAGGAGCTTCCTGAAACTAGCCGGGCCAGAAGTATaGGCCATTCTCAAAAAGCCA +
Preference number: 4 (lower is better)
Translates to: NTEAHTNGGQPCRSFLKLAGPEV*AILKKP
Trigger: TGGCTTTTTGAGAATGGCCCATACTTCTGGCCCGGC...TAGTTTCAGGAAGCTCCTGCAGGGCTGTCCACCGTTGGTGTGTGCCTCAGTATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
CDS-3UTR CCA 90 bp GCATGGCCTACAGAGAAACCCATCCATCCGCAGGTGGGGGTGTGGCTTGAAAGAAGGAAGCAGTCCAGTTaGCATACCACGAATAGGTCA +
Preference number: 4 (lower is better)
Translates to: AWPTEKPIHPQVGVWLERRKQSS*HTTNRS
Trigger: TGACCTATTCGTGGTATGCCAACTGGACTGCTTCCT...TCTTTCAAGCCACACCCCCACCTGCGGATGGATGGGTTTCTCTGTAGGCCATGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
CDS-3UTR CCA 90 bp AAACCCATCCATCCGCAGGTGGGGGTGTGGCTTGAAAGACCTGCTCTTAGTTCCAGGGTGACTTTACCATaGGGTTCGAGTCTGAGCCAA +
Preference number: 4 (lower is better)
Translates to: KPIHPQVGVWLERPALSSRVTLP*GSSLSQ
Trigger: TTGGCTCAGACTCGAACCCCATGGTAAAGTCACCCT...GGAACTAAGAGCAGGTCTTTCAAGCCACACCCCCACCTGCGGATGGATGGGTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR CCA 90 bp CAACCACTGGTGGCTGGTTGTGCTGGTTTTACTTGGCTCAAGGGCTGCTGGGAAAAGGATACCAGCCAGTaGTCCAAGAGCAGACCAGAA +
Preference number: 4 (lower is better)
Translates to: QPLVAGCAGFTWLKGCWEKDTSQ*SKSRPE
Trigger: TTCTGGTCTGCTCTTGGACCACTGGCTGGTATCCTT...TTCCCAGCAGCCCTTGAGCCAAGTAAAACCAGCACAACCAGCCACCAGTGGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR CCA 90 bp CCTACAGAGAAACCCATCCATCCGCAGGTGGGGGTGTGGCTTGAAAGACCTGCTATCTGGTTGTGCTCTTaGATTAGCTGGGCATTTGGG +
Preference number: 4 (lower is better)
Translates to: PTEKPIHPQVGVWLERPAIWLCS*ISWAFG
Trigger: CCCAAATGCCCAGCTAATCCAAGAGCACAACCAGAT...AGCAGGTCTTTCAAGCCACACCCCCACCTGCGGATGGATGGGTTTCTCTGTAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR CCA 90 bp ACCAGCTGTCACCAGAAGGGAGTTCCTAACACTTGCCACACCTGCTCCCCCGACACAACAACGAAAAGTTaGGAGGGAAAGGGAGTAGCT +
Preference number: 4 (lower is better)
Translates to: TSCHQKGVPNTCHTCSPDTTTKS*EGKGVA
Trigger: AGCTACTCCCTTTCCCTCCCAACTTTTCGTTGTTGT...GTCGGGGGAGCAGGTGTGGCAAGTGTTAGGAACTCCCTTCTGGTGACAGCTGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR CCA 90 bp CGCAGGTGGGGGTGTGGCTTGAAAGACCTGCTCTTAGTTCCCTTCTTTACCCTCATATCCCCACTCAAATaGAAGCACACTCCCCAGCAC +
Preference number: 4 (lower is better)
Translates to: RRWGCGLKDLLLVPFFTLISPLK*KHTPQH
Trigger: GTGCTGGGGAGTGTGCTTCCATTTGAGTGGGGATAT...GAGGGTAAAGAAGGGAACTAAGAGCAGGTCTTTCAAGCCACACCCCCACCTGCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR CCA 90 bp ATGGAAATTTTCCTCCTCATGCCCAGCCATCTGAACCAAGGACAGGTTCCTTCTGGAAATCCGAGCTCATaGATGAATCGGGCGCGCCGG +
Preference number: 4 (lower is better)
Translates to: MEIFLLMPSHLNQGQVPSGNPSS*MNRARR
Trigger: CCGGCGCGCCCGATTCATCCATGAGCTCGGATTTCC...AGAAGGAACCTGTCCTTGGTTCAGATGGCTGGGCATGAGGAGGAAAATTTCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358395.11
CDS-3UTR CCA 90 bp ATCAAAGGCATACAACATGAGCCTTGTGGGCACTGCCTCACCAACCACTGGTGGGGAAATCCGAGCTCATaGATGAACCCCCTAAGACCG +
Preference number: 4 (lower is better)
Translates to: IKGIQHEPCGHCLTNHWWGNPSS*MNPLRP
Trigger: CGGTCTTAGGGGGTTCATCCATGAGCTCGGATTTCC...CCACCAGTGGTTGGTGAGGCAGTGCCCACAAGGCTCATGTTGTATGCCTTTGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000432261.6
3UTR CAA 72 bp CAGAAGTATGGGCCATTCTCAAAAAGCCACTGCTCTTaGGAGCCACTCGAGAGGTTCACAGTGGCTCCCTTC +
Preference number: 4 (lower is better)
Translates to: QKYGPFSKSHCS*EPLERFTVAPF
Trigger: GAAGGGAGCCACTGTGAACCTCTCGAGTGGCTCCAAAGAGCAGTGGCTTTTTGAGAATGGCCCATACTTCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
3UTR CAA 72 bp GCAACTACTAATGGTTCAGCCACCCGTGGAGTCCAGTaGGGGCTGAGTTATGCTCCACTAACCCATAGCAGA +
Preference number: 4 (lower is better)
Translates to: ATTNGSATRGVQ*GLSYAPLTHSR
Trigger: TCTGCTATGGGTTAGTGGAGCATAACTCAGCCCCAACTGGACTCCACGGGTGGCTGAACCATTAGTAGTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
3UTR CAA 72 bp CTTAGAGCGGGATCAGGCCAGGGAGATGACATGATTTaGAAGTGGGGTTGTGAAAAAGGACAAGGCCCGAGG +
Preference number: 4 (lower is better)
Translates to: LRAGSGQGDDMI*KWGCEKGQGPR
Trigger: CCTCGGGCCTTGTCCTTTTTCACAACCCCACTTCAAAATCATGTCATCTCCCTGGCCTGATCCCGCTCTAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR TCA 90 bp GGGTGTGGCTTGAAAGACCTGCTCTTAGTTCCCTTCTTTACCCTCCTGCTTGACCTTTACCCTCCTGCTTaGCATGGAGATGAGGCTCCA +
Preference number: 4 (lower is better)
Translates to: GCGLKDLLLVPFFTLLLDLYPPA*HGDEAP
Trigger: TGGAGCCTCATCTCCATGTCAAGCAGGAGGGTAAAG...GTCAAGCAGGAGGGTAAAGAAGGGAACTAAGAGCAGGTCTTTCAAGCCACACCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
ENST00000545616.2
CDS-3UTR TCA 90 bp TGGGGGTGTGGCTTGAAAGACCTGCTCTTAGTTCCCTTCTTTACCCTCCTGCTTCAAAGGCATACAACATaGGCCTTGTGGGCACTGCCT +
Preference number: 4 (lower is better)
Translates to: WGCGLKDLLLVPFFTLLLQRHTT*ALWALP
Trigger: AGGCAGTGCCCACAAGGCTCATGTTGTATGCCTTTG...AAGCAGGAGGGTAAAGAAGGGAACTAAGAGCAGGTCTTTCAAGCCACACCCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
CDS-3UTR TCA 90 bp CCTCTTCTCTCGGCAGGGGGTAGTGTCAAAGTGCTTTGGTTGTCACAAGACCCATTTGAAGTGGGGTTGTaGAAAAGGACAAGGCCCGAG +
Preference number: 4 (lower is better)
Translates to: PLLSAGGSVKVLWLSQDPFEVGL*KRTRPE
Trigger: CTCGGGCCTTGTCCTTTTTCACAACCCCACTTCAAA...TGGGTCTTGTGACAACCAAAGCACTTTGACACTACCCCCTGCCGAGAGAAGAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR TCA 90 bp ACCAGCTGTCACCAGAAGGGAGTTCCTAACACTTGCCACACCTGCTCCCCCGACAGGAAGCTTTTTGGCTaGGGTTCTGTTCCTATCAAT +
Preference number: 4 (lower is better)
Translates to: TSCHQKGVPNTCHTCSPDRKLFG*GSVPIN
Trigger: ATTGATAGGAACAGAACCTCAGCCAAAAAGCTTCCT...GTCGGGGGAGCAGGTGTGGCAAGTGTTAGGAACTCCCTTCTGGTGACAGCTGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR TCA 90 bp ATGGAAATTTTCCTCCTCATGCCCAGCCATCTGAACCAAGGACAGGTTCCTTCTGGCGGGAGGATCACTTaGGTCCAGGAAGTTGAGGCT +
Preference number: 4 (lower is better)
Translates to: MEIFLLMPSHLNQGQVPSGGRIT*VQEVEA
Trigger: AGCCTCAACTTCCTGGACTCAAGTGATCCTCCCGCC...AGAAGGAACCTGTCCTTGGTTCAGATGGCTGGGCATGAGGAGGAAAATTTCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR TCA 90 bp GGCCTGCATGGCCTACAGAGAAACCCATCCATCCGCAGGTGGGGGTGTGGCTTGTTTACTAAAGAACCGTaGACCAGCATTTTCCAGTTA +
Preference number: 4 (lower is better)
Translates to: GLHGLQRNPSIRRWGCGLFTKEP*TSIFQL
Trigger: TAACTGGAAAATGCTGGTTCACGGTTCTTTAGTAAA...CAAGCCACACCCCCACCTGCGGATGGATGGGTTTCTCTGTAGGCCATGCAGGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR TCA 90 bp TTGTGCTGGTTTTACTTGGCTCAAGGGCTGCTGGGAAGGTTTGCTGCGACAAAGACTGGCAAAGGGAGCTaGGAAGAGAGTTCCCCCAAA +
Preference number: 4 (lower is better)
Translates to: LCWFYLAQGLLGRFAATKTGKGS*EESSPK
Trigger: TTTGGGGGAACTCTCTTCTCAGCTCCCTTTGCCAGT...CTTTGTCGCAGCAAACCTTCCCAGCAGCCCTTGAGCCAAGTAAAACCAGCACAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR TCA 90 bp GGGCTTTGCGCCCTGGTCCAGTGCTACGTATCAACCCCCTCAACATGCCTGTGGGACGTCTATGAAACCTaGGGTTCAGCATTTCATAAA +
Preference number: 4 (lower is better)
Translates to: GLCALVQCYVSTPSTCLWDVYET*GSAFHK
Trigger: TTTATGAAATGCTGAACCTCAGGTTTCATAGACGTC...CCACAGGCATGTTGAGGGGGTTGATACGTAGCACTGGACCAGGGCGCAAAGCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR TCA 90 bp ACCAGCTGTCACCAGAAGGGAGTTCCTAACACTTGCCACACCTGCTCCCCCGACGTACAAAGACGTCTATaGAACCTGAGGTTCAGCATT +
Preference number: 4 (lower is better)
Translates to: TSCHQKGVPNTCHTCSPDVQRRL*NLRFSI
Trigger: AATGCTGAACCTCAGGTTTCATAGACGTCTTTGTAC...GTCGGGGGAGCAGGTGTGGCAAGTGTTAGGAACTCCCTTCTGGTGACAGCTGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR GCA 90 bp CATCCGCAGGTGGGGGTGTGGCTTGAAAGACCTGCTCTTAGTTCCCTTCTTTACTTTCTGTGGAAGGCGTaGTTACATGGGCAAATCCCC +
Preference number: 4 (lower is better)
Translates to: HPQVGVWLERPALSSLLYFLWKA*LHGQIP
Trigger: GGGGATTTGCCCATGTAAGCACGCCTTCCACAGAAA...GTAAAGAAGGGAACTAAGAGCAGGTCTTTCAAGCCACACCCCCACCTGCGGATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
ENST00000545616.2
CDS-3UTR GCA 90 bp CCACTCCTCTTCTCTCGGCAGGGGGTAGTGTCAAAGTGCTTTGGTTGTCACAAGTTTCTGTGGAAGGCGTaGTTACATGGGCAAATCCCC +
Preference number: 4 (lower is better)
Translates to: PLLFSRQGVVSKCFGCHKFLWKA*LHGQIP
Trigger: GGGGATTTGCCCATGTAAGCACGCCTTCCACAGAAA...CTTGTGACAACCAAAGCACTTTGACACTACCCCCTGCCGAGAGAAGAGGAGTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
ENST00000545616.2
CDS-3UTR GCA 90 bp GGGCCAAACTACAAGACGAAAAAGTGCCCCGTTCCTGGCAATGATGTCAGAAGAGCTGCTGGGAAGGTTTaGTGCGACAAAGGCCTGCAT +
Preference number: 4 (lower is better)
Translates to: GPNYKTKKCPVPGNDVRRAAGKV*CDKGLH
Trigger: ATGCAGGCCTTTGTCGCAGCAAACCTTCCCAGCAGC...TCTTCTGACATCATTGCCAGGAACGGGGCACTTTTTCGTCTTGTAGTTTGGCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR GCA 90 bp GTGGCAGCTGGTGTCCTAGGTAGAGAGCAGCCATACAGACACCACATGTGTTCCACTGGTGGCTGGTTGTaGTGGTTTTACTTGGCTCAA +
Preference number: 4 (lower is better)
Translates to: VAAGVLGREQPYRHHMCSTGGWL*WFYLAQ
Trigger: TTGAGCCAAGTAAAACCAGCACAACCAGCCACCAGT...GGAACACATGTGGTGTCTGTATGGCTGCTCTCTACCTAGGACACCAGCTGCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
ENST00000545616.2
CDS-3UTR GCA 90 bp ACTGGTGGCTGGTTGTGCTGGTTTTACTTGGCTCAAGGGCTGCTGGGAAGGTTTTGCAGAGCATTCTTGTaGTCTCCTCTCATGGCTGGA +
Preference number: 4 (lower is better)
Translates to: TGGWLCWFYLAQGLLGRFCRAFL*SPLMAG
Trigger: TCCAGCCATGAGAGGAGAGCACAAGAATGCTCTGCA...AAACCTTCCCAGCAGCCCTTGAGCCAAGTAAAACCAGCACAACCAGCCACCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
CDS-3UTR GCA 90 bp CCTCTTCTCTCGGCAGGGGGTAGTGTCAAAGTGCTTTGGTTGTCACAAGACCCAGAGCTCTGGGTATACTaGCCTGGATGTATCAGGATG +
Preference number: 4 (lower is better)
Translates to: PLLSAGGSVKVLWLSQDPELWVY*PGCIRM
Trigger: CATCCTGATACATCCAGGGCAGTATACCCAGAGCTC...TGGGTCTTGTGACAACCAAAGCACTTTGACACTACCCCCTGCCGAGAGAAGAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR GCA 90 bp CCACTCCTCTTCTCTCGGCAGGGGGTAGTGTCAAAGTGCTTTGGTTGTCACAAGAGTGACCACAACAGTTaGAGCCACACATCACCACTG +
Preference number: 4 (lower is better)
Translates to: PLLFSRQGVVSKCFGCHKSDHNS*SHTSPL
Trigger: CAGTGGTGATGTGTGGCTGCAACTGTTGTGGTCACT...CTTGTGACAACCAAAGCACTTTGACACTACCCCCTGCCGAGAGAAGAGGAGTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR GCA 90 bp ACTGGTGGCTGGTTGTGCTGGTTTTACTTGGCTCAAGGGCTGCTGGGAAGGTTTAGTGACCACAACAGTTaGAGCCACACATCACCACTG +
Preference number: 4 (lower is better)
Translates to: TGGWLCWFYLAQGLLGRFSDHNS*SHTSPL
Trigger: CAGTGGTGATGTGTGGCTGCAACTGTTGTGGTCACT...AAACCTTCCCAGCAGCCCTTGAGCCAAGTAAAACCAGCACAACCAGCCACCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR GCA 90 bp GCTGAGAAGGTTGTTAGTGGTCCCTCATCTGGGCAAAGCAGACCCAAGGTGGTGGCCTTCAGTTGCTGCTaGTCAAACTCCTGCATCAAA +
Preference number: 4 (lower is better)
Translates to: AEKVVSGPSSGQSRPKVVAFSCC*SNSCIK
Trigger: TTTGATGCAGGAGTTTGAGCAGCAGCAACTGAAGGC...CACCACCTTGGGTCTGCTTTGCCCAGATGAGGGACCACTAACAACCTTCTCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR GCA 90 bp TTCTTTACCCTCCTGCTTGACATGGAGATGAGGCTCCAGGAGAGAGAGTGTAATAGTGGGCCAAGATCGTaGCACTGCATTCCAGCCTGG +
Preference number: 4 (lower is better)
Translates to: FFTLLLDMEMRLQERECNSGPRS*HCIPAW
Trigger: CCAGGCTGGAATGCAGTGGCACGATCTTGGCCCACT...ATTACACTCTCTCTCCTGGAGCCTCATCTCCATGTCAAGCAGGAGGGTAAAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR GCA 90 bp CTGCATGGCCTACAGAGAAACCCATCCATCCGCAGGTGGGGGTGTGGCTTGAAATACAAGACGAAAAAGTaGCCCGTTCCTGGCAATGAT +
Preference number: 4 (lower is better)
Translates to: LHGLQRNPSIRRWGCGLKYKTKK*PVPGND
Trigger: ATCATTGCCAGGAACGGGGCACTTTTTCGTCTTGTA...TTTCAAGCCACACCCCCACCTGCGGATGGATGGGTTTCTCTGTAGGCCATGCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR CCA 90 bp GCAGCTGGTGTCCTAGGTAGAGAGCAGCCATACAGACACCACATGTGTTCCTCCATAAGGCACTTTCTGTaGAAGGCGTGCTTACATGGG +
Preference number: 4 (lower is better)
Translates to: AAGVLGREQPYRHHMCSSIRHFL*KACLHG
Trigger: CCCATGTAAGCACGCCTTCCACAGAAAGTGCCTTAT...GGAGGAACACATGTGGTGTCTGTATGGCTGCTCTCTACCTAGGACACCAGCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
ENST00000545616.2
CDS-3UTR CCA 90 bp ATCAAAGGCATACAACATGAGCCTTGTGGGCACTGCCTCACCAACCACTGGTGGTGTGCTGGTTTTACTTaGCTCAAGGGCTGCTGGGAA +
Preference number: 4 (lower is better)
Translates to: IKGIQHEPCGHCLTNHWWCAGFT*LKGCWE
Trigger: TTCCCAGCAGCCCTTGAGCCAAGTAAAACCAGCACA...CCACCAGTGGTTGGTGAGGCAGTGCCCACAAGGCTCATGTTGTATGCCTTTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
CDS-3UTR CCA 90 bp CCACTCCTCTTCTCTCGGCAGGGGGTAGTGTCAAAGTGCTTTGGTTGTCACAAGTGTGCTGGTTTTACTTaGCTCAAGGGCTGCTGGGAA +
Preference number: 4 (lower is better)
Translates to: PLLFSRQGVVSKCFGCHKCAGFT*LKGCWE
Trigger: TTCCCAGCAGCCCTTGAGCCAAGTAAAACCAGCACA...CTTGTGACAACCAAAGCACTTTGACACTACCCCCTGCCGAGAGAAGAGGAGTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
ENST00000545616.2
CDS-3UTR CCA 90 bp AGCCAAGATGGCCTTATCAAAGGCATACAACATGAGCCTTGTGGGCACTGCCTCGGTGGCTGGTTGTGCTaGTTTTACTTGGCTCAAGGG +
Preference number: 4 (lower is better)
Translates to: SQDGLIKGIQHEPCGHCLGGWLC*FYLAQG
Trigger: CCCTTGAGCCAAGTAAAACCAGCACAACCAGCCACC...GAGGCAGTGCCCACAAGGCTCATGTTGTATGCCTTTGATAAGGCCATCTTGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
CDS-3UTR CCA 90 bp AATACTGAGGCACACACCAACGGTGGACAGCCCTGCAGGAGCTTCCTGAAACTACCAACCACTGGTGGCTaGTTGTGCTGGTTTTACTTG +
Preference number: 4 (lower is better)
Translates to: NTEAHTNGGQPCRSFLKLPTTGG*LCWFYL
Trigger: CAAGTAAAACCAGCACAACCAGCCACCAGTGGTTGG...TAGTTTCAGGAAGCTCCTGCAGGGCTGTCCACCGTTGGTGTGTGCCTCAGTATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
CDS-3UTR CCA 90 bp CAGGTGGGGGTGTGGCTTGAAAGACCTGCTCTTAGTTCCCTTCTTTACCCTCCTCCAACCACTGGTGGCTaGTTGTGCTGGTTTTACTTG +
Preference number: 4 (lower is better)
Translates to: QVGVWLERPALSSLLYPPPTTGG*LCWFYL
Trigger: CAAGTAAAACCAGCACAACCAGCCACCAGTGGTTGG...AGGAGGGTAAAGAAGGGAACTAAGAGCAGGTCTTTCAAGCCACACCCCCACCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
ENST00000545616.2
CDS-3UTR CCA 90 bp TGCTTTGGTTGTCACAAGACCCAGACACCTAGGTTCCCAGTTTGGCTGGCCCAACTCACCAACCACTGGTaGCTGGTTGTGCTGGTTTTA +
Preference number: 4 (lower is better)
Translates to: CFGCHKTQTPRFPVWLAQLTNHW*LVVLVL
Trigger: TAAAACCAGCACAACCAGCCACCAGTGGTTGGTGAG...TTGGGCCAGCCAAACTGGGAACCTAGGTGTCTGGGTCTTGTGACAACCAAAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
ENST00000545616.2
CDS-3UTR CCA 90 bp GAGGCAAACCCGCAGGCTCATCCACTCCTCTTCTCTCGGCAGGGGGTAGTGTCATACTCAAAGCCAAGATaGCCTTATCAAAGGCATACA +
Preference number: 4 (lower is better)
Translates to: EANPQAHPLLFSRQGVVSYSKPR*PYQRHT
Trigger: TGTATGCCTTTGATAAGGCCATCTTGGCTTTGAGTA...TGACACTACCCCCTGCCGAGAGAAGAGGAGTGGATGAGCCTGCGGGTTTGCCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
CDS-3UTR CCA 90 bp GGGTGTGGCTTGAAAGACCTGCTCTTAGTTCCCTTCTTTACCCTCCTGCTTGACATCCTGAGGGGGAAATaGGTGACGAGGAACACTGCT +
Preference number: 4 (lower is better)
Translates to: GCGLKDLLLVPFFTLLLDILRGK*VTRNTA
Trigger: AGCAGTGTTCCTCGTCACCCATTTCCCCCTCAGGAT...GTCAAGCAGGAGGGTAAAGAAGGGAACTAAGAGCAGGTCTTTCAAGCCACACCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
CDS-3UTR CCA 90 bp GCAGGAACTACTGCTAGTGATACTAGGCTTGCTGCAGGAGGATGTCACGCTGAGAAAGCCACTGCTCTTTaGAGCCACTCGAGAGGTTCA +
Preference number: 4 (lower is better)
Translates to: AGTTASDTRLAAGGCHAEKATAL*SHSRGS
Trigger: TGAACCTCTCGAGTGGCTCCAAAGAGCAGTGGCTTT...CTCAGCGTGACATCCTCCTGCAGCAAGCCTAGTATCACTAGCAGTAGTTCCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
CDS-3UTR CCA 90 bp CGCAGGTGGGGGTGTGGCTTGAAAGACCTGCTCTTAGTTCCCTTCTTTACCCTCCGGAGAGCAGGGCTGTaGAAAAGAATTTTCCATCTG +
Preference number: 4 (lower is better)
Translates to: RRWGCGLKDLLLVPFFTLRRAGL*KRIFHL
Trigger: CAGATGGAAAATTCTTTTCCACAGCCCTGCTCTCCG...GAGGGTAAAGAAGGGAACTAAGAGCAGGTCTTTCAAGCCACACCCCCACCTGCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
CDS-3UTR CCA 90 bp AAACCCATCCATCCGCAGGTGGGGGTGTGGCTTGAAAGACCTGCTCTTAGTTCCGAAAATGGTGGCTGCTaGCAATTAGTGAGGCTAGTC +
Preference number: 4 (lower is better)
Translates to: KPIHPQVGVWLERPALSSENGGC*QLVRLV
Trigger: GACTAGCCTCACTAATTGCCAGCAGCCACCATTTTC...GGAACTAAGAGCAGGTCTTTCAAGCCACACCCCCACCTGCGGATGGATGGGTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
CDS-3UTR CCA 90 bp CCTACAGAGAAACCCATCCATCCGCAGGTGGGGGTGTGGCTTGAAAGACCTGCTTTCCATGGAAAATGGTaGCTGCTGGCAATTAGTGAG +
Preference number: 4 (lower is better)
Translates to: PTEKPIHPQVGVWLERPAFHGKW*LLAISE
Trigger: CTCACTAATTGCCAGCAGCCACCATTTTCCATGGAA...AGCAGGTCTTTCAAGCCACACCCCCACCTGCGGATGGATGGGTTTCTCTGTAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
CDS-3UTR CCA 90 bp ATCAAAGGCATACAACATGAGCCTTGTGGGCACTGCCTCACCAACCACTGGTGGTGTGCTCTCCTCTCATaGCTGGAACTATCTGGGCTT +
Preference number: 4 (lower is better)
Translates to: IKGIQHEPCGHCLTNHWWCALLS*LELSGL
Trigger: AAGCCCAGATAGTTCCAGCCATGAGAGGAGAGCACA...CCACCAGTGGTTGGTGAGGCAGTGCCCACAAGGCTCATGTTGTATGCCTTTGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
CDS-3UTR CCA 90 bp CTGCATGGCCTACAGAGAAACCCATCCATCCGCAGGTGGGGGTGTGGCTTGAAAGGAATCAAGTCAGGCTaGTTTTGTTCCCTGTTTCTG +
Preference number: 4 (lower is better)
Translates to: LHGLQRNPSIRRWGCGLKGIKSG*FCSLFL
Trigger: CAGAAACAGGGAACAAAACCAGCCTGACTTGATTCC...TTTCAAGCCACACCCCCACCTGCGGATGGATGGGTTTCTCTGTAGGCCATGCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR CCA 90 bp ATGTCAGAAGACCAAGAGGCGATAGTTACCAGCAACACTCTAGGAAGACCAGCTGGTATCCGGCAATGGTaGGAGGTCCCCTGTATCCCT +
Preference number: 4 (lower is better)
Translates to: MSEDQEAIVTSNTLGRPAGIRQW*EVPCIP
Trigger: AGGGATACAGGGGACCTCCCACCATTGCCGGATACC...AGCTGGTCTTCCTAGAGTGTTGCTGGTAACTATCGCCTCTTGGTCTTCTGACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR CCA 90 bp TGCTTTGGTTGTCACAAGACCCAGACACCTAGGTTCCCAGTTTGGCTGGCCCAAAGTCAGAGTTCACTGTaGGCAAAGGCAGAGATGACC +
Preference number: 4 (lower is better)
Translates to: CFGCHKTQTPRFPVWLAQSQSSL*AKAEMT
Trigger: GGTCATCTCTGCCTTTGCCCACAGTGAACTCTGACT...TTGGGCCAGCCAAACTGGGAACCTAGGTGTCTGGGTCTTGTGACAACCAAAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR CCA 90 bp GCTGCGACAAAGGCCTGCATGGCCTACAGAGAAACCCATCCATCCGCAGGTGGGTGCATAAATGATCTCTaGAAGGATACCCAAGGAACA +
Preference number: 4 (lower is better)
Translates to: AATKACMAYRETHPSAGGCINDL*KDTQGT
Trigger: TGTTCCTTGGGTATCCTTCCAGAGATCATTTATGCA...CCCACCTGCGGATGGATGGGTTTCTCTGTAGGCCATGCAGGCCTTTGTCGCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR CCA 90 bp GAGGCACACACCAACGGTGGACAGCCCTGCAGGAGCTTCCTGAAACTATCTACAATCTGGTTGTGCTCTTaGATTAGCTGGGCATTTGGG +
Preference number: 4 (lower is better)
Translates to: EAHTNGGQPCRSFLKLSTIWLCS*ISWAFG
Trigger: CCCAAATGCCCAGCTAATCCAAGAGCACAACCAGAT...TGTAGATAGTTTCAGGAAGCTCCTGCAGGGCTGTCCACCGTTGGTGTGTGCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR CCA 90 bp GCACTGGGGAAAAGGATCTTCTTGTCAAGAACAGGGTATCCGGCAATGGTGGGAGTGCAGTGGGGATCTTaGCTCACTGCAACTTCTGTC +
Preference number: 4 (lower is better)
Translates to: ALGKRIFLSRTGYPAMVGVQWGS*LTATSV
Trigger: GACAGAAGTTGCAGTGAGCCAAGATCCCCACTGCAC...TCCCACCATTGCCGGATACCCTGTTCTTGACAAGAAGATCCTTTTCCCCAGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR CCA 90 bp ATGATCTCTGGAAGGATACCCAAGGAACAAACCAATAGTAGGTATTCATGGAGTCCCGAGGCGGGAGAATaGCGTGAACCTGGGAGGCGG +
Preference number: 4 (lower is better)
Translates to: MISGRIPKEQTNSRYSWSPEAGE*REPGRR
Trigger: CCGCCTCCCAGGTTCACGCCATTCTCCCGCCTCGGG...ACTCCATGAATACCTACTATTGGTTTGTTCCTTGGGTATCCTTCCAGAGATCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR CCA 90 bp GGGCTTTGCGCCCTGGTCCAGTGCTACGTATCAACCCCCTCAACATGCCTGTGGGCTCTACAGCTGAATTaGCAAAGTAAGGTTTACTAC +
Preference number: 4 (lower is better)
Translates to: GLCALVQCYVSTPSTCLWALQLN*QSKVYY
Trigger: GTAGTAAACCTTACTTTGCCAATTCAGCTGTAGAGC...CCACAGGCATGTTGAGGGGGTTGATACGTAGCACTGGACCAGGGCGCAAAGCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR TCA 90 bp ATGATCTCTGGAAGGATACCCAAGGAACAAACCAATAGTAGGTATTCATGGAGTCCGCTCCGCCCTTTGTaGGGGACTCACCCTCCAGTC +
Preference number: 4 (lower is better)
Translates to: MISGRIPKEQTNSRYSWSPLRPL*GTHPPV
Trigger: GACTGGAGGGTGAGTCCCTCACAAAGGGCGGAGCGG...ACTCCATGAATACCTACTATTGGTTTGTTCCTTGGGTATCCTTCCAGAGATCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336095.10
CDS-3UTR TCA 90 bp AAACAGCTCACTATAAACGGGGTGTTTTGTGGCATTCAACTCTGTTGTGCTACAACAGTGGCTCCCTTCTaGGGCAGTGGCAGTGGGCTC +
Preference number: 4 (lower is better)
Translates to: KQLTINGVFCGIQLCCATTVAPF*GSGSGL
Trigger: GAGCCCACTGCCACTGCCTCAGAAGGGAGCCACTGT...TGTAGCACAACAGAGTTGAATGCCACAAAACACCCCGTTTATAGTGAGCTGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
CDS-3UTR TCA 90 bp TTCTTTACCCTCCTGCTTGACATGGAGATGAGGCTCCAGGAGAGAGAGTGTAATGTGGAGCAAAGCAGTTaGCGAGGAATTGAGGCAGGC +
Preference number: 4 (lower is better)
Translates to: FFTLLLDMEMRLQERECNVEQSS*RGIEAG
Trigger: GCCTGCCTCAATTCCTCGTCAACTGCTTTGCTCCAC...ATTACACTCTCTCTCCTGGAGCCTCATCTCCATGTCAAGCAGGAGGGTAAAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
CDS-3UTR TCA 90 bp CAGGTGGGGGTGTGGCTTGAAAGACCTGCTCTTAGTTCCCTTCTTTACCCTCCTCATGGGGTTCGAGTCTaGGCCAAGAGAGTTATAAAG +
Preference number: 4 (lower is better)
Translates to: QVGVWLERPALSSLLYPPHGVRV*AKRVIK
Trigger: CTTTATAACTCTCTTGGCTCAGACTCGAACCCCATG...AGGAGGGTAAAGAAGGGAACTAAGAGCAGGTCTTTCAAGCCACACCCCCACCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR TCA 90 bp CCTACAGAGAAACCCATCCATCCGCAGGTGGGGGTGTGGCTTGAAAGACCTGCTAGGAAGCTTTTTGGCTaGGGTTCTGTTCCTATCAAT +
Preference number: 4 (lower is better)
Translates to: PTEKPIHPQVGVWLERPARKLFG*GSVPIN
Trigger: ATTGATAGGAACAGAACCTCAGCCAAAAAGCTTCCT...AGCAGGTCTTTCAAGCCACACCCCCACCTGCGGATGGATGGGTTTCTCTGTAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR TCA 90 bp CCTACAGAGAAACCCATCCATCCGCAGGTGGGGGTGTGGCTTGAAAGACCTGCTGTGTACATGCATAAATaGTCTCTGGAAGGATACCCA +
Preference number: 4 (lower is better)
Translates to: PTEKPIHPQVGVWLERPAVYMHK*SLEGYP
Trigger: TGGGTATCCTTCCAGAGATCATTTATGCATGTACAC...AGCAGGTCTTTCAAGCCACACCCCCACCTGCGGATGGATGGGTTTCTCTGTAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR TCA 90 bp ACACCTAGGTTCCCAGTTTGGCTGGCCCAAGAGTTCTTCATGAGGCAAAAGAAGCTGGTCTTGAACTCTTaGCCTAAGGTGATCCGCCTG +
Preference number: 4 (lower is better)
Translates to: TPRFPVWLAQEFFMRQKKLVLNS*PKVIRL
Trigger: CAGGCGGATCACCTTAGGTCAAGAGTTCAAGACCAG...CTTCTTTTGCCTCATGAAGAACTCTTGGGCCAGCCAAACTGGGAACCTAGGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR TCA 90 bp AAACAGCTCACTATAAACGGGGTGTTTTGTGGCATTCAACTCTGTTGTGCTACACCTGTCCCAGCCTCCTaGGTGGCTGGGATTACAGGC +
Preference number: 4 (lower is better)
Translates to: KQLTINGVFCGIQLCCATPVPAS*VAGITG
Trigger: GCCTGTAATCCCAGCCACTCAGGAGGCTGGGACAGG...TGTAGCACAACAGAGTTGAATGCCACAAAACACCCCGTTTATAGTGAGCTGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR TCA 90 bp ATGTCAGAAGACCAAGAGGCGATAGTTACCAGCAACACTCTAGGAAGACCAGCTCCCCGTTCCTGGCAATaGTGTCAGAAGACCAAGAGG +
Preference number: 4 (lower is better)
Translates to: MSEDQEAIVTSNTLGRPAPRSWQ*CQKTKR
Trigger: CCTCTTGGTCTTCTGACATCATTGCCAGGAACGGGG...AGCTGGTCTTCCTAGAGTGTTGCTGGTAACTATCGCCTCTTGGTCTTCTGACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR TCA 90 bp GTTTGCTGCGACAAAGGCCTGCATGGCCTACAGAGAAACCCATCCATCCGCAGGGTACAAAGACGTCTATaGAACCTGAGGTTCAGCATT +
Preference number: 4 (lower is better)
Translates to: VCCDKGLHGLQRNPSIRRVQRRL*NLRFSI
Trigger: AATGCTGAACCTCAGGTTTCATAGACGTCTTTGTAC...CCTGCGGATGGATGGGTTTCTCTGTAGGCCATGCAGGCCTTTGTCGCAGCAAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR GCA 90 bp AATACTGAGGCACACACCAACGGTGGACAGCCCTGCAGGAGCTTCCTGAAACTAGGGGTAGTGTCAAAGTaGTTTGGTTGTCACAAGACC +
Preference number: 4 (lower is better)
Translates to: NTEAHTNGGQPCRSFLKLGVVSK*FGCHKT
Trigger: GGTCTTGTGACAACCAAAGCACTTTGACACTACCCC...TAGTTTCAGGAAGCTCCTGCAGGGCTGTCCACCGTTGGTGTGTGCCTCAGTATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
CDS-3UTR GCA 90 bp AGCCAAGATGGCCTTATCAAAGGCATACAACATGAGCCTTGTGGGCACTGCCTCGGTGACGAGGAACACTaGTACTCAAAGCCAAGATGG +
Preference number: 4 (lower is better)
Translates to: SQDGLIKGIQHEPCGHCLGDEEH*YSKPRW
Trigger: CCATCTTGGCTTTGAGTAGCAGTGTTCCTCGTCACC...GAGGCAGTGCCCACAAGGCTCATGTTGTATGCCTTTGATAAGGCCATCTTGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
CDS-3UTR GCA 90 bp AATACTGAGGCACACACCAACGGTGGACAGCCCTGCAGGAGCTTCCTGAAACTATTCTCAAAAAGCCACTaGTCTTTGGAGCCACTCGAG +
Preference number: 4 (lower is better)
Translates to: NTEAHTNGGQPCRSFLKLFSKSH*SLEPLE
Trigger: CTCGAGTGGCTCCAAAGAGCAGTGGCTTTTTGAGAA...TAGTTTCAGGAAGCTCCTGCAGGGCTGTCCACCGTTGGTGTGTGCCTCAGTATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
CDS-3UTR GCA 90 bp AAGGTTTGCTGCGACAAAGGCCTGCATGGCCTACAGAGAAACCCATCCATCCGCATGGAAAATGGTGGCTaGTGGCAATTAGTGAGGCTA +
Preference number: 4 (lower is better)
Translates to: KVCCDKGLHGLQRNPSIRMENGG*WQLVRL
Trigger: TAGCCTCACTAATTGCCAGCAGCCACCATTTTCCAT...GCGGATGGATGGGTTTCTCTGTAGGCCATGCAGGCCTTTGTCGCAGCAAACCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
CDS-3UTR GCA 90 bp GCTGAGAAGGTTGTTAGTGGTCCCTCATCTGGGCAAAGCAGACCCAAGGTGGTGGGGACAGAAAAAGCCTaGAACTTTCAGTTGGGAGAA +
Preference number: 4 (lower is better)
Translates to: AEKVVSGPSSGQSRPKVVGTEKA*NFQLGE
Trigger: TTCTCCCAACTGAAAGTTGCAGGCTTTTTCTGTCCC...CACCACCTTGGGTCTGCTTTGCCCAGATGAGGGACCACTAACAACCTTCTCAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
CDS-3UTR GCA 90 bp TTGTGCTGGTTTTACTTGGCTCAAGGGCTGCTGGGAAGGTTTGCTGCGACAAAGCAAGGTGGTGCTGAGTaGAGAGTGCAGAGCATTCTT +
Preference number: 4 (lower is better)
Translates to: LCWFYLAQGLLGRFAATKQGGAE*RVQSIL
Trigger: AAGAATGCTCTGCACTCTGCACTCAGCACCACCTTG...CTTTGTCGCAGCAAACCTTCCCAGCAGCCCTTGAGCCAAGTAAAACCAGCACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
CDS-3UTR GCA 90 bp TGTCACAAGACCCAGACACCTAGGTTCCCAGTTTGGCTGGCCCAAGAGTTCTTCGCCTTCAGTTGCTGCTaGTCAAACTCCTGCATCAAA +
Preference number: 4 (lower is better)
Translates to: CHKTQTPRFPVWLAQEFFAFSCC*SNSCIK
Trigger: TTTGATGCAGGAGTTTGAGCAGCAGCAACTGAAGGC...GAAGAACTCTTGGGCCAGCCAAACTGGGAACCTAGGTGTCTGGGTCTTGTGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR GCA 90 bp GTAGAGAGCAGCCATACAGACACCACATGTGTTCCTCCTGGCTCCACACAGACGGACTCACTGTGCACTTaGTCAGTAGCTAAGATGTCT +
Preference number: 4 (lower is better)
Translates to: VESSHTDTTCVPPGSTQTDSLCT*SVAKMS
Trigger: AGACATCTTAGCTACTGAGCAAGTGCACAGTGAGTC...CGTCTGTGTGGAGCCAGGAGGAACACATGTGGTGTCTGTATGGCTGCTCTCTAC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR GCA 90 bp AAGGTTTGCTGCGACAAAGGCCTGCATGGCCTACAGAGAAACCCATCCATCCGCTACAAGACGAAAAAGTaGCCCGTTCCTGGCAATGAT +
Preference number: 4 (lower is better)
Translates to: KVCCDKGLHGLQRNPSIRYKTKK*PVPGND
Trigger: ATCATTGCCAGGAACGGGGCACTTTTTCGTCTTGTA...GCGGATGGATGGGTTTCTCTGTAGGCCATGCAGGCCTTTGTCGCAGCAAACCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR CCA 90 bp CAACCACTGGTGGCTGGTTGTGCTGGTTTTACTTGGCTCAAGGGCTGCTGGGAACCTGAAGTTGTAATGTaGGAAATCCGAGCTCATGGA +
Preference number: 4 (lower is better)
Translates to: QPLVAGCAGFTWLKGCWEPEVVM*EIRAHG
Trigger: TCCATGAGCTCGGATTTCCCACATTACAACTTCAGG...TTCCCAGCAGCCCTTGAGCCAAGTAAAACCAGCACAACCAGCCACCAGTGGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
ENST00000545616.2
CDS-3UTR CCA 90 bp ACCCTCATGAAGTTTCTTGAGGCAAACCCGCAGGCTCATCCACTCCTCTTCTCTGAAGGCGTGCTTACATaGGCAAATCCCCAACTCATC +
Preference number: 4 (lower is better)
Translates to: TLMKFLEANPQAHPLLFSEGVLT*ANPQLI
Trigger: GATGAGTTGGGGATTTGCCCATGTAAGCACGCCTTC...AGAGAAGAGGAGTGGATGAGCCTGCGGGTTTGCCTCAAGAAACTTCATGAGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
ENST00000545616.2
CDS-3UTR CCA 90 bp TTCTCAAAAAGCCACTGCTCTTTGGAGCCACTCGAGAGGTTCACAGTGGCTCCCATAAGGCACTTTCTGTaGAAGGCGTGCTTACATGGG +
Preference number: 4 (lower is better)
Translates to: FSKSHCSLEPLERFTVAPIRHFL*KACLHG
Trigger: CCCATGTAAGCACGCCTTCCACAGAAAGTGCCTTAT...GGGAGCCACTGTGAACCTCTCGAGTGGCTCCAAAGAGCAGTGGCTTTTTGAGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
CDS-3UTR CCA 90 bp GTAGAGAGCAGCCATACAGACACCACATGTGTTCCTCCTGGCTCCACACAGACGAGTGTCAAAGTGCTTTaGTTGTCACAAGACCCAGAC +
Preference number: 4 (lower is better)
Translates to: VESSHTDTTCVPPGSTQTSVKVL*LSQDPD
Trigger: GTCTGGGTCTTGTGACAACCAAAGCACTTTGACACT...CGTCTGTGTGGAGCCAGGAGGAACACATGTGGTGTCTGTATGGCTGCTCTCTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
ENST00000545616.2
CDS-3UTR CCA 90 bp ACCCTCATGAAGTTTCTTGAGGCAAACCCGCAGGCTCATCCACTCCTCTTCTCTCTCACCAACCACTGGTaGCTGGTTGTGCTGGTTTTA +
Preference number: 4 (lower is better)
Translates to: TLMKFLEANPQAHPLLFSLTNHW*LVVLVL
Trigger: TAAAACCAGCACAACCAGCCACCAGTGGTTGGTGAG...AGAGAAGAGGAGTGGATGAGCCTGCGGGTTTGCCTCAAGAAACTTCATGAGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
ENST00000545616.2
CDS-3UTR CCA 90 bp ACCAGCTGTCACCAGAAGGGAGTTCCTAACACTTGCCACACCTGCTCCCCCGACTACTCAAAGCCAAGATaGCCTTATCAAAGGCATACA +
Preference number: 4 (lower is better)
Translates to: TSCHQKGVPNTCHTCSPDYSKPR*PYQRHT
Trigger: TGTATGCCTTTGATAAGGCCATCTTGGCTTTGAGTA...GTCGGGGGAGCAGGTGTGGCAAGTGTTAGGAACTCCCTTCTGGTGACAGCTGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR CCA 90 bp CATCCACTCCTCTTCTCTCGGCAGGGGGTAGTGTCAAAGTGCTTTGGTTGTCACAGGAAGCAGTCCAGTTaGCATACCACGAATAGGTCA +
Preference number: 4 (lower is better)
Translates to: HPLLFSRQGVVSKCFGCHRKQSS*HTTNRS
Trigger: TGACCTATTCGTGGTATGCCAACTGGACTGCTTCCT...GTGACAACCAAAGCACTTTGACACTACCCCCTGCCGAGAGAAGAGGAGTGGATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
CDS-3UTR CCA 90 bp CCTCTTCTCTCGGCAGGGGGTAGTGTCAAAGTGCTTTGGTTGTCACAAGACCCAGAAAATGGTGGCTGCTaGCAATTAGTGAGGCTAGTC +
Preference number: 4 (lower is better)
Translates to: PLLSAGGSVKVLWLSQDPENGGC*QLVRLV
Trigger: GACTAGCCTCACTAATTGCCAGCAGCCACCATTTTC...TGGGTCTTGTGACAACCAAAGCACTTTGACACTACCCCCTGCCGAGAGAAGAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
CDS-3UTR CCA 90 bp GAGGCACACACCAACGGTGGACAGCCCTGCAGGAGCTTCCTGAAACTATCTACAACACTCCCCAGCACATaGGGATCCCTTATTAATCTT +
Preference number: 4 (lower is better)
Translates to: EAHTNGGQPCRSFLKLSTTLPST*GSLINL
Trigger: AAGATTAATAAGGGATCCCCATGTGCTGGGGAGTGT...TGTAGATAGTTTCAGGAAGCTCCTGCAGGGCTGTCCACCGTTGGTGTGTGCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR CCA 90 bp GCAGCTGGTGTCCTAGGTAGAGAGCAGCCATACAGACACCACATGTGTTCCTCCACACTCCCCAGCACATaGGGATCCCTTATTAATCTT +
Preference number: 4 (lower is better)
Translates to: AAGVLGREQPYRHHMCSSTLPST*GSLINL
Trigger: AAGATTAATAAGGGATCCCCATGTGCTGGGGAGTGT...GGAGGAACACATGTGGTGTCTGTATGGCTGCTCTCTACCTAGGACACCAGCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR CCA 90 bp TGCTTTGGTTGTCACAAGACCCAGACACCTAGGTTCCCAGTTTGGCTGGCCCAACACAGAAGTAAGGACTaGATGGTAAGCCAAAGGTGC +
Preference number: 4 (lower is better)
Translates to: CFGCHKTQTPRFPVWLAQHRSKD*MVSQRC
Trigger: GCACCTTTGGCTTACCATCCAGTCCTTACTTCTGTG...TTGGGCCAGCCAAACTGGGAACCTAGGTGTCTGGGTCTTGTGACAACCAAAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR CCA 90 bp AGAAACCCATCCATCCGCAGGTGGGGGTGTGGCTTGAAAGACCTGCTCTTAGTTCACAGAAGTAAGGACTaGATGGTAAGCCAAAGGTGC +
Preference number: 4 (lower is better)
Translates to: RNPSIRRWGCGLKDLLLVHRSKD*MVSQRC
Trigger: GCACCTTTGGCTTACCATCCAGTCCTTACTTCTGTG...AACTAAGAGCAGGTCTTTCAAGCCACACCCCCACCTGCGGATGGATGGGTTTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR CCA 90 bp ACACTAATGGAAATTTTCCTCCTCATGCCCAGCCATCTGAACCAAGGACAGGTTCAGATCCACCAGGCTTaGGACTGGCAAAGGGAGCTG +
Preference number: 4 (lower is better)
Translates to: TLMEIFLLMPSHLNQGQVQIHQA*DWQREL
Trigger: CAGCTCCCTTTGCCAGTCCCAAGCCTGGTGGATCTG...AACCTGTCCTTGGTTCAGATGGCTGGGCATGAGGAGGAAAATTTCCATTAGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
3UTR CAA 72 bp GGCCTGTGCCACTGCTGTCAGCTACAGAGCCTGATCTaGAGCATCCTGTCGCAGATAGAAAGTCAATCAGAA +
Preference number: 4 (lower is better)
Translates to: GLCHCCQLQSLI*SILSQIESQSE
Trigger: TTCTGATTGACTTTCTATCTGCGACAGGATGCTCAAGATCAGGCTCTGTAGCTGACAGCAGTGGCACAGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR TCA 90 bp ATGGAAATTTTCCTCCTCATGCCCAGCCATCTGAACCAAGGACAGGTTCCTTCTCAAAGGCATACAACATaGGCCTTGTGGGCACTGCCT +
Preference number: 4 (lower is better)
Translates to: MEIFLLMPSHLNQGQVPSQRHTT*ALWALP
Trigger: AGGCAGTGCCCACAAGGCTCATGTTGTATGCCTTTG...AGAAGGAACCTGTCCTTGGTTCAGATGGCTGGGCATGAGGAGGAAAATTTCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
CDS-3UTR TCA 90 bp ACTGGTGGCTGGTTGTGCTGGTTTTACTTGGCTCAAGGGCTGCTGGGAAGGTTTCCTGCAGGAGCTTCCTaGAACTATCTACAATTCCAA +
Preference number: 4 (lower is better)
Translates to: TGGWLCWFYLAQGLLGRFPAGAS*NYLQFQ
Trigger: TTGGAATTGTAGATAGTTTCAGGAAGCTCCTGCAGG...AAACCTTCCCAGCAGCCCTTGAGCCAAGTAAAACCAGCACAACCAGCCACCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
CDS-3UTR TCA 90 bp GAGGCACACACCAACGGTGGACAGCCCTGCAGGAGCTTCCTGAAACTATCTACAAAGCAAGCCTCCTTCTaGTATTGGTCACTGAAAACA +
Preference number: 4 (lower is better)
Translates to: EAHTNGGQPCRSFLKLSTKQASF*YWSLKT
Trigger: TGTTTTCAGTGACCAATATCAGAAGGAGGCTTGCTT...TGTAGATAGTTTCAGGAAGCTCCTGCAGGGCTGTCCACCGTTGGTGTGTGCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
CDS-3UTR TCA 90 bp ACCCTCATGAAGTTTCTTGAGGCAAACCCGCAGGCTCATCCACTCCTCTTCTCTCATGGGGTTCGAGTCTaGGCCAAGAGAGTTATAAAG +
Preference number: 4 (lower is better)
Translates to: TLMKFLEANPQAHPLLFSHGVRV*AKRVIK
Trigger: CTTTATAACTCTCTTGGCTCAGACTCGAACCCCATG...AGAGAAGAGGAGTGGATGAGCCTGCGGGTTTGCCTCAAGAAACTTCATGAGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR TCA 90 bp CCAACCACTGGTGGCTGGTTGTGCTGGTTTTACTTGGCTCAAGGGCTGCTGGGATCACATTTTGTATTCTaGTTTCTGGGATGGCTCTTC +
Preference number: 4 (lower is better)
Translates to: PTTGGWLCWFYLAQGLLGSHFVF*FLGWLF
Trigger: GAAGAGCCATCCCAGAAATCAGAATACAAAATGTGA...TCCCAGCAGCCCTTGAGCCAAGTAAAACCAGCACAACCAGCCACCAGTGGTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR TCA 90 bp ACCAGCTGTCACCAGAAGGGAGTTCCTAACACTTGCCACACCTGCTCCCCCGACAGGGACTGCAGATTCTaGTTTGTACAGAAAACTAAA +
Preference number: 4 (lower is better)
Translates to: TSCHQKGVPNTCHTCSPDRDCRF*FVQKTK
Trigger: TTTAGTTTTCTGTACAAATCAGAATCTGCAGTCCCT...GTCGGGGGAGCAGGTGTGGCAAGTGTTAGGAACTCCCTTCTGGTGACAGCTGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR TCA 90 bp GGCCTACAGAGAAACCCATCCATCCGCAGGTGGGGGTGTGGCTTGAAAGACCTGAGGGACTGCAGATTCTaGTTTGTACAGAAAACTAAA +
Preference number: 4 (lower is better)
Translates to: GLQRNPSIRRWGCGLKDLRDCRF*FVQKTK
Trigger: TTTAGTTTTCTGTACAAATCAGAATCTGCAGTCCCT...CAGGTCTTTCAAGCCACACCCCCACCTGCGGATGGATGGGTTTCTCTGTAGGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR TCA 90 bp ACACCTAGGTTCCCAGTTTGGCTGGCCCAAGAGTTCTTCATGAGGCAAAAGAAGTCAGGCATATCCACATaGGACTCACTGTGCACTTGC +
Preference number: 4 (lower is better)
Translates to: TPRFPVWLAQEFFMRQKKSGIST*DSLCTC
Trigger: GCAAGTGCACAGTGAGTCTCATGTGGATATGCCTGA...CTTCTTTTGCCTCATGAAGAACTCTTGGGCCAGCCAAACTGGGAACCTAGGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR GCA 90 bp ACACCTAGGTTCCCAGTTTGGCTGGCCCAAGAGTTCTTCATGAGGCAAAAGAAGTTTCTGTGGAAGGCGTaGTTACATGGGCAAATCCCC +
Preference number: 4 (lower is better)
Translates to: TPRFPVWLAQEFFMRQKKFLWKA*LHGQIP
Trigger: GGGGATTTGCCCATGTAAGCACGCCTTCCACAGAAA...CTTCTTTTGCCTCATGAAGAACTCTTGGGCCAGCCAAACTGGGAACCTAGGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
ENST00000545616.2
CDS-3UTR GCA 90 bp GCTGGGAAGGTTTGCTGCGACAAAGGCCTGCATGGCCTACAGAGAAACCCATCCCAACAGTCTGATCCTTaGGGTAAGCTATACAATGTT +
Preference number: 4 (lower is better)
Translates to: AGKVCCDKGLHGLQRNPSQQSDP*GKLYNV
Trigger: AACATTGTATAGCTTACCGCAAGGATCAGACTGTTG...GGATGGGTTTCTCTGTAGGCCATGCAGGCCTTTGTCGCAGCAAACCTTCCCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
ENST00000545616.2
CDS-3UTR GCA 90 bp ACCCTCATGAAGTTTCTTGAGGCAAACCCGCAGGCTCATCCACTCCTCTTCTCTGGGGTAGTGTCAAAGTaGTTTGGTTGTCACAAGACC +
Preference number: 4 (lower is better)
Translates to: TLMKFLEANPQAHPLLFSGVVSK*FGCHKT
Trigger: GGTCTTGTGACAACCAAAGCACTTTGACACTACCCC...AGAGAAGAGGAGTGGATGAGCCTGCGGGTTTGCCTCAAGAAACTTCATGAGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
ENST00000545616.2
CDS-3UTR GCA 90 bp AAACAGCTCACTATAAACGGGGTGTTTTGTGGCATTCAACTCTGTTGTGCTACAGAGCCTTGTGGGCACTaGCTCACCAACCACTGGTGG +
Preference number: 4 (lower is better)
Translates to: KQLTINGVFCGIQLCCATEPCGH*LTNHWW
Trigger: CCACCAGTGGTTGGTGAGGCAGTGCCCACAAGGCTC...TGTAGCACAACAGAGTTGAATGCCACAAAACACCCCGTTTATAGTGAGCTGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
CDS-3UTR GCA 90 bp TCAGTTGTACCCCTAGCAACTACTAATGGTTCAGCCACCCGTGGAGTCCAGTTGTTCTCAAAAAGCCACTaGTCTTTGGAGCCACTCGAG +
Preference number: 4 (lower is better)
Translates to: SVVPLATTNGSATRGVQLFSKSH*SLEPLE
Trigger: CTCGAGTGGCTCCAAAGAGCAGTGGCTTTTTGAGAA...CAACTGGACTCCACGGGTGGCTGAACCATTAGTAGTTGCTAGGGGTACAACTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR GCA 90 bp TGCTTTGGTTGTCACAAGACCCAGACACCTAGGTTCCCAGTTTGGCTGGCCCAAATGGAAAATGGTGGCTaGTGGCAATTAGTGAGGCTA +
Preference number: 4 (lower is better)
Translates to: CFGCHKTQTPRFPVWLAQMENGG*WQLVRL
Trigger: TAGCCTCACTAATTGCCAGCAGCCACCATTTTCCAT...TTGGGCCAGCCAAACTGGGAACCTAGGTGTCTGGGTCTTGTGACAACCAAAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
CDS-3UTR GCA 90 bp ACTGGTGGCTGGTTGTGCTGGTTTTACTTGGCTCAAGGGCTGCTGGGAAGGTTTGGGACAGAAAAAGCCTaGAACTTTCAGTTGGGAGAA +
Preference number: 4 (lower is better)
Translates to: TGGWLCWFYLAQGLLGRFGTEKA*NFQLGE
Trigger: TTCTCCCAACTGAAAGTTGCAGGCTTTTTCTGTCCC...AAACCTTCCCAGCAGCCCTTGAGCCAAGTAAAACCAGCACAACCAGCCACCAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
CDS-3UTR GCA 90 bp ACACTAATGGAAATTTTCCTCCTCATGCCCAGCCATCTGAACCAAGGACAGGTTGGTGGAGGACCCAGATaGAGGGAGCAAATATTCGGG +
Preference number: 4 (lower is better)
Translates to: TLMEIFLLMPSHLNQGQVGGGPR*REQIFG
Trigger: CCCGAATATTTGCTCCCTGCATCTGGGTCCTCCACC...AACCTGTCCTTGGTTCAGATGGCTGGGCATGAGGAGGAAAATTTCCATTAGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
CDS-3UTR GCA 90 bp GCTGAGAAGGTTGTTAGTGGTCCCTCATCTGGGCAAAGCAGACCCAAGGTGGTGCAACAGGAGTGTGATTaGAAAAACATCCCCCAATTC +
Preference number: 4 (lower is better)
Translates to: AEKVVSGPSSGQSRPKVVQQECD*KNIPQF
Trigger: GAATTGGGGGATGTTTTTGCAATCACACTCCTGTTG...CACCACCTTGGGTCTGCTTTGCCCAGATGAGGGACCACTAACAACCTTCTCAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR GCA 90 bp CATTCTCCATGTCACGCAGACTGTATTCCTAATGAAAAACTTCCCCCACTCACAAGAGGCCTGTGCCACTaGTGTCAGCTACAGAGCCTG +
Preference number: 4 (lower is better)
Translates to: HSPCHADCIPNEKLPPLTRGLCH*CQLQSL
Trigger: CAGGCTCTGTAGCTGACAGCAGTGGCACAGGCCTCT...TGTGAGTGGGGGAAGTTTTTCATTAGGAATACAGTCTGCGTGACATGGAGAATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR GCA 90 bp ACCCTCATGAAGTTTCTTGAGGCAAACCCGCAGGCTCATCCACTCCTCTTCTCTATAGAAGCCTTCAGTTaGTGCTGCTCAAACTCCTGC +
Preference number: 4 (lower is better)
Translates to: TLMKFLEANPQAHPLLFSIEAFS*CCSNSC
Trigger: GCAGGAGTTTGAGCAGCAGCAACTGAAGGCTTCTAT...AGAGAAGAGGAGTGGATGAGCCTGCGGGTTTGCCTCAAGAAACTTCATGAGGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR CCA 90 bp TGCTTTGGTTGTCACAAGACCCAGACACCTAGGTTCCCAGTTTGGCTGGCCCAACCTGAAGTTGTAATGTaGGAAATCCGAGCTCATGGA +
Preference number: 4 (lower is better)
Translates to: CFGCHKTQTPRFPVWLAQPEVVM*EIRAHG
Trigger: TCCATGAGCTCGGATTTCCCACATTACAACTTCAGG...TTGGGCCAGCCAAACTGGGAACCTAGGTGTCTGGGTCTTGTGACAACCAAAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
ENST00000545616.2
CDS-3UTR CCA 90 bp GCATGGCCTACAGAGAAACCCATCCATCCGCAGGTGGGGGTGTGGCTTGAAAGATTGAGAGGCAGATTCTaGAATCCAATATTAGGCATC +
Preference number: 4 (lower is better)
Translates to: AWPTEKPIHPQVGVWLERLRGRF*NPILGI
Trigger: GATGCCTAATATTGGATTCCAGAATCTGCCTCTCAA...TCTTTCAAGCCACACCCCCACCTGCGGATGGATGGGTTTCTCTGTAGGCCATGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
ENST00000545616.2
CDS-3UTR CCA 90 bp GTTTGCTGCGACAAAGGCCTGCATGGCCTACAGAGAAACCCATCCATCCGCAGGTTGAGAGGCAGATTCTaGAATCCAATATTAGGCATC +
Preference number: 4 (lower is better)
Translates to: VCCDKGLHGLQRNPSIRRLRGRF*NPILGI
Trigger: GATGCCTAATATTGGATTCCAGAATCTGCCTCTCAA...CCTGCGGATGGATGGGTTTCTCTGTAGGCCATGCAGGCCTTTGTCGCAGCAAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
ENST00000545616.2
CDS-3UTR CCA 90 bp TGGGGGTGTGGCTTGAAAGACCTGCTCTTAGTTCCCTTCTTTACCCTCCTGCTTATAAGGCACTTTCTGTaGAAGGCGTGCTTACATGGG +
Preference number: 4 (lower is better)
Translates to: WGCGLKDLLLVPFFTLLLIRHFL*KACLHG
Trigger: CCCATGTAAGCACGCCTTCCACAGAAAGTGCCTTAT...AAGCAGGAGGGTAAAGAAGGGAACTAAGAGCAGGTCTTTCAAGCCACACCCCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
ENST00000545616.2
CDS-3UTR CCA 90 bp ATGGAAATTTTCCTCCTCATGCCCAGCCATCTGAACCAAGGACAGGTTCCTTCTCCTAGGTTCCCAGTTTaGCTGGCCCAAGAGTTCTTC +
Preference number: 4 (lower is better)
Translates to: MEIFLLMPSHLNQGQVPSPRFPV*LAQEFF
Trigger: GAAGAACTCTTGGGCCAGCCAAACTGGGAACCTAGG...AGAAGGAACCTGTCCTTGGTTCAGATGGCTGGGCATGAGGAGGAAAATTTCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
CDS-3UTR CCA 90 bp ACACTAATGGAAATTTTCCTCCTCATGCCCAGCCATCTGAACCAAGGACAGGTTTGGCTCAAGGGCTGCTaGGAAGGTTTGCTGCGACAA +
Preference number: 4 (lower is better)
Translates to: TLMEIFLLMPSHLNQGQVWLKGC*EGLLRQ
Trigger: TTGTCGCAGCAAACCTTCCCAGCAGCCCTTGAGCCA...AACCTGTCCTTGGTTCAGATGGCTGGGCATGAGGAGGAAAATTTCCATTAGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
CDS-3UTR CCA 90 bp TTCTTTACCCTCCTGCTTGACATGGAGATGAGGCTCCAGGAGAGAGAGTGTAATCTGGACGGGCCTTACTaGTGCATAGGAGAGGGAAAT +
Preference number: 4 (lower is better)
Translates to: FFTLLLDMEMRLQERECNLDGPY*CIGEGN
Trigger: ATTTCCCTCTCCTATGCACCAGTAAGGCCCGTCCAG...ATTACACTCTCTCTCCTGGAGCCTCATCTCCATGTCAAGCAGGAGGGTAAAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
CDS-3UTR CCA 90 bp TTCTTTACCCTCCTGCTTGACATGGAGATGAGGCTCCAGGAGAGAGAGTGTAATGCCGGGCCAGAAGTATaGGCCATTCTCAAAAAGCCA +
Preference number: 4 (lower is better)
Translates to: FFTLLLDMEMRLQERECNAGPEV*AILKKP
Trigger: TGGCTTTTTGAGAATGGCCCATACTTCTGGCCCGGC...ATTACACTCTCTCTCCTGGAGCCTCATCTCCATGTCAAGCAGGAGGGTAAAGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
CDS-3UTR CCA 90 bp AAACAGCTCACTATAAACGGGGTGTTTTGTGGCATTCAACTCTGTTGTGCTACAGGCACACACCAACGGTaGACAGCCCTGCAGGAGCTT +
Preference number: 4 (lower is better)
Translates to: KQLTINGVFCGIQLCCATGTHQR*TALQEL
Trigger: AAGCTCCTGCAGGGCTGTCCACCGTTGGTGTGTGCC...TGTAGCACAACAGAGTTGAATGCCACAAAACACCCCGTTTATAGTGAGCTGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
CDS-3UTR CCA 90 bp ATCAAAGGCATACAACATGAGCCTTGTGGGCACTGCCTCACCAACCACTGGTGGAAACGGGGTGTTTTGTaGCATTCAACTCTGTTGTGC +
Preference number: 4 (lower is better)
Translates to: IKGIQHEPCGHCLTNHWWKRGVL*HSTLLC
Trigger: GCACAACAGAGTTGAATGCCACAAAACACCCCGTTT...CCACCAGTGGTTGGTGAGGCAGTGCCCACAAGGCTCATGTTGTATGCCTTTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
CDS-3UTR CCA 90 bp TTCTCAAAAAGCCACTGCTCTTTGGAGCCACTCGAGAGGTTCACAGTGGCTCCCAAACGGGGTGTTTTGTaGCATTCAACTCTGTTGTGC +
Preference number: 4 (lower is better)
Translates to: FSKSHCSLEPLERFTVAPKRGVL*HSTLLC
Trigger: GCACAACAGAGTTGAATGCCACAAAACACCCCGTTT...GGGAGCCACTGTGAACCTCTCGAGTGGCTCCAAAGAGCAGTGGCTTTTTGAGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
CDS-3UTR CCA 90 bp ACTGGTGGCTGGTTGTGCTGGTTTTACTTGGCTCAAGGGCTGCTGGGAAGGTTTTTCCATGGAAAATGGTaGCTGCTGGCAATTAGTGAG +
Preference number: 4 (lower is better)
Translates to: TGGWLCWFYLAQGLLGRFFHGKW*LLAISE
Trigger: CTCACTAATTGCCAGCAGCCACCATTTTCCATGGAA...AAACCTTCCCAGCAGCCCTTGAGCCAAGTAAAACCAGCACAACCAGCCACCAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
CDS-3UTR CCA 90 bp ATGTCAGAAGACCAAGAGGCGATAGTTACCAGCAACACTCTAGGAAGACCAGCTCCACCTGCCCCTATTTaGCCATTTCTGTCCTGCCTT +
Preference number: 4 (lower is better)
Translates to: MSEDQEAIVTSNTLGRPAPPAPI*PFLSCL
Trigger: AAGGCAGGACAGAAATGGCCAAATAGGGGCAGGTGG...AGCTGGTCTTCCTAGAGTGTTGCTGGTAACTATCGCCTCTTGGTCTTCTGACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR CCA 90 bp ACACCTAGGTTCCCAGTTTGGCTGGCCCAAGAGTTCTTCATGAGGCAAAAGAAGCAAGGGGCTTGGCACTaGGGAAAAGGATCTTCTTGT +
Preference number: 4 (lower is better)
Translates to: TPRFPVWLAQEFFMRQKKQGAWH*GKGSSC
Trigger: ACAAGAAGATCCTTTTCCCCAGTGCCAAGCCCCTTG...CTTCTTTTGCCTCATGAAGAACTCTTGGGCCAGCCAAACTGGGAACCTAGGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR CCA 90 bp GTGGCAGCTGGTGTCCTAGGTAGAGAGCAGCCATACAGACACCACATGTGTTCCCTGGGTATACTGCCCTaGATGTATCAGGATGTATTT +
Preference number: 4 (lower is better)
Translates to: VAAGVLGREQPYRHHMCSLGILP*MYQDVF
Trigger: AAATACATCCTGATACATCCAGGGCAGTATACCCAG...GGAACACATGTGGTGTCTGTATGGCTGCTCTCTACCTAGGACACCAGCTGCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR CCA 90 bp AATACTGAGGCACACACCAACGGTGGACAGCCCTGCAGGAGCTTCCTGAAACTAGCTCAGGAAGCTTTTTaGCTGAGGTTCTGTTCCTAT +
Preference number: 4 (lower is better)
Translates to: NTEAHTNGGQPCRSFLKLAQEAF*LRFCSY
Trigger: ATAGGAACAGAACCTCAGCCAAAAAGCTTCCTGAGC...TAGTTTCAGGAAGCTCCTGCAGGGCTGTCCACCGTTGGTGTGTGCCTCAGTATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR CCA 90 bp TGTCACAAGACCCAGACACCTAGGTTCCCAGTTTGGCTGGCCCAAGAGTTCTTCGCTCAGGAAGCTTTTTaGCTGAGGTTCTGTTCCTAT +
Preference number: 4 (lower is better)
Translates to: CHKTQTPRFPVWLAQEFFAQEAF*LRFCSY
Trigger: ATAGGAACAGAACCTCAGCCAAAAAGCTTCCTGAGC...GAAGAACTCTTGGGCCAGCCAAACTGGGAACCTAGGTGTCTGGGTCTTGTGACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR CCA 90 bp CCTACAGAGAAACCCATCCATCCGCAGGTGGGGGTGTGGCTTGAAAGACCTGCTGCTCTACAGCTGAATTaGCAAAGTAAGGTTTACTAC +
Preference number: 4 (lower is better)
Translates to: PTEKPIHPQVGVWLERPAALQLN*QSKVYY
Trigger: GTAGTAAACCTTACTTTGCCAATTCAGCTGTAGAGC...AGCAGGTCTTTCAAGCCACACCCCCACCTGCGGATGGATGGGTTTCTCTGTAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR CCA 90 bp GCATGGCCTACAGAGAAACCCATCCATCCGCAGGTGGGGGTGTGGCTTGAAAGACATCTTGTAACAATTTaGGCTCTACAGCTGAATTGG +
Preference number: 4 (lower is better)
Translates to: AWPTEKPIHPQVGVWLERHLVTI*ALQLNW
Trigger: CCAATTCAGCTGTAGAGCCCAAATTGTTACAAGATG...TCTTTCAAGCCACACCCCCACCTGCGGATGGATGGGTTTCTCTGTAGGCCATGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR CCA 90 bp CATTCTCCATGTCACGCAGACTGTATTCCTAATGAAAAACTTCCCCCACTCACAGGAGGGAAGGGCAGATaGAGAGGAACGGTGTGCAGT +
Preference number: 4 (lower is better)
Translates to: HSPCHADCIPNEKLPPLTGGKGR*RGTVCS
Trigger: ACTGCACACCGTTCCTCTCCATCTGCCCTTCCCTCC...TGTGAGTGGGGGAAGTTTTTCATTAGGAATACAGTCTGCGTGACATGGAGAATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR TCA 90 bp CATTCTCCATGTCACGCAGACTGTATTCCTAATGAAAAACTTCCCCCACTCACACGGAAGTCCAAATACTaGGGCACACACCAACGGTGG +
Preference number: 4 (lower is better)
Translates to: HSPCHADCIPNEKLPPLTRKSKY*GTHQRW
Trigger: CCACCGTTGGTGTGTGCCTCAGTATTTGGACTTCCG...TGTGAGTGGGGGAAGTTTTTCATTAGGAATACAGTCTGCGTGACATGGAGAATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
CDS-3UTR TCA 90 bp AGGAACACTGCTACTCAAAGCCAAGATGGCCTTATCAAAGGCATACAACATGAGGTGGAGCAAAGCAGTTaGCGAGGAATTGAGGCAGGC +
Preference number: 4 (lower is better)
Translates to: RNTATQSQDGLIKGIQHEVEQSS*RGIEAG
Trigger: GCCTGCCTCAATTCCTCGTCAACTGCTTTGCTCCAC...CTCATGTTGTATGCCTTTGATAAGGCCATCTTGGCTTTGAGTAGCAGTGTTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
CDS-3UTR TCA 90 bp CATTCTCCATGTCACGCAGACTGTATTCCTAATGAAAAACTTCCCCCACTCACACCGAGGCTATTTCTCTaGTGGATCCAAGGGGCTTGG +
Preference number: 4 (lower is better)
Translates to: HSPCHADCIPNEKLPPLTPRLFL*WIQGAW
Trigger: CCAAGCCCCTTGGATCCATCAGAGAAATAGCCTCGG...TGTGAGTGGGGGAAGTTTTTCATTAGGAATACAGTCTGCGTGACATGGAGAATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR TCA 90 bp TTGTGCTGGTTTTACTTGGCTCAAGGGCTGCTGGGAAGGTTTGCTGCGACAAAGAGTAGGAGCGTTCCTTaGATACACTTGTCTGGTATC +
Preference number: 4 (lower is better)
Translates to: LCWFYLAQGLLGRFAATKSRSVP*IHLSGI
Trigger: GATACCAGACAAGTGTATTCAAGGAACGCTCCTACT...CTTTGTCGCAGCAAACCTTCCCAGCAGCCCTTGAGCCAAGTAAAACCAGCACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR TCA 90 bp CAACCACTGGTGGCTGGTTGTGCTGGTTTTACTTGGCTCAAGGGCTGCTGGGAAGACGTCTATGAAACCTaGGGTTCAGCATTTCATAAA +
Preference number: 4 (lower is better)
Translates to: QPLVAGCAGFTWLKGCWEDVYET*GSAFHK
Trigger: TTTATGAAATGCTGAACCTCAGGTTTCATAGACGTC...TTCCCAGCAGCCCTTGAGCCAAGTAAAACCAGCACAACCAGCCACCAGTGGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR GCA 90 bp GCTGAGAAGGTTGTTAGTGGTCCCTCATCTGGGCAAAGCAGACCCAAGGTGGTGCAACAGTCTGATCCTTaGGGTAAGCTATACAATGTT +
Preference number: 4 (lower is better)
Translates to: AEKVVSGPSSGQSRPKVVQQSDP*GKLYNV
Trigger: AACATTGTATAGCTTACCGCAAGGATCAGACTGTTG...CACCACCTTGGGTCTGCTTTGCCCAGATGAGGGACCACTAACAACCTTCTCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
CDS-3UTR GCA 90 bp ATGATCTCTGGAAGGATACCCAAGGAACAAACCAATAGTAGGTATTCATGGAGTGAGCCTTGTGGGCACTaGCTCACCAACCACTGGTGG +
Preference number: 4 (lower is better)
Translates to: MISGRIPKEQTNSRYSWSEPCGH*LTNHWW
Trigger: CCACCAGTGGTTGGTGAGGCAGTGCCCACAAGGCTC...ACTCCATGAATACCTACTATTGGTTTGTTCCTTGGGTATCCTTCCAGAGATCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR GCA 90 bp GGGTGTGGCTTGAAAGACCTGCTCTTAGTTCCCTTCTTTACCCTCCTGCTTGACGGGACAGAAAAAGCCTaGAACTTTCAGTTGGGAGAA +
Preference number: 4 (lower is better)
Translates to: GCGLKDLLLVPFFTLLLDGTEKA*NFQLGE
Trigger: TTCTCCCAACTGAAAGTTGCAGGCTTTTTCTGTCCC...GTCAAGCAGGAGGGTAAAGAAGGGAACTAAGAGCAGGTCTTTCAAGCCACACCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
CDS-3UTR GCA 90 bp CATTCTCCATGTCACGCAGACTGTATTCCTAATGAAAAACTTCCCCCACTCACAGAACTATCTGGGCTTTaGGCCCTGGTCCAGTGCTAC +
Preference number: 4 (lower is better)
Translates to: HSPCHADCIPNEKLPPLTELSGL*ALVQCY
Trigger: GTAGCACTGGACCAGGGCGCAAAGCCCAGATAGTTC...TGTGAGTGGGGGAAGTTTTTCATTAGGAATACAGTCTGCGTGACATGGAGAATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
CDS-3UTR GCA 90 bp TGCTTTGGTTGTCACAAGACCCAGACACCTAGGTTCCCAGTTTGGCTGGCCCAACAACAGGAGTGTGATTaGAAAAACATCCCCCAATTC +
Preference number: 4 (lower is better)
Translates to: CFGCHKTQTPRFPVWLAQQQECD*KNIPQF
Trigger: GAATTGGGGGATGTTTTTGCAATCACACTCCTGTTG...TTGGGCCAGCCAAACTGGGAACCTAGGTGTCTGGGTCTTGTGACAACCAAAGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR GCA 90 bp TGCTTTGGTTGTCACAAGACCCAGACACCTAGGTTCCCAGTTTGGCTGGCCCAAAAAGACACAAGAGCTTaGCTAAGTGACCACAACAGT +
Preference number: 4 (lower is better)
Translates to: CFGCHKTQTPRFPVWLAQKDTRA*LSDHNS
Trigger: ACTGTTGTGGTCACTTAGGCAAGCTCTTGTGTCTTT...TTGGGCCAGCCAAACTGGGAACCTAGGTGTCTGGGTCTTGTGACAACCAAAGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR GCA 90 bp GCAGCTGGTGTCCTAGGTAGAGAGCAGCCATACAGACACCACATGTGTTCCTCCCTGGACATGTCCATCTaGTTAAGAAATCTGCTTAAG +
Preference number: 4 (lower is better)
Translates to: AAGVLGREQPYRHHMCSSLDMSI*LRNLLK
Trigger: CTTAAGCAGATTTCTTAAGCAGATGGACATGTCCAG...GGAGGAACACATGTGGTGTCTGTATGGCTGCTCTCTACCTAGGACACCAGCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR CCA 90 bp GTGGCAGCTGGTGTCCTAGGTAGAGAGCAGCCATACAGACACCACATGTGTTCCTTGAGAGGCAGATTCTaGAATCCAATATTAGGCATC +
Preference number: 4 (lower is better)
Translates to: VAAGVLGREQPYRHHMCSLRGRF*NPILGI
Trigger: GATGCCTAATATTGGATTCCAGAATCTGCCTCTCAA...GGAACACATGTGGTGTCTGTATGGCTGCTCTCTACCTAGGACACCAGCTGCCAC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
ENST00000545616.2
CDS-3UTR CCA 90 bp GCAGCTGGTGTCCTAGGTAGAGAGCAGCCATACAGACACCACATGTGTTCCTCCTTGAGAGGCAGATTCTaGAATCCAATATTAGGCATC +
Preference number: 4 (lower is better)
Translates to: AAGVLGREQPYRHHMCSSLRGRF*NPILGI
Trigger: GATGCCTAATATTGGATTCCAGAATCTGCCTCTCAA...GGAGGAACACATGTGGTGTCTGTATGGCTGCTCTCTACCTAGGACACCAGCTGC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
ENST00000545616.2
CDS-3UTR CCA 90 bp ACACTAATGGAAATTTTCCTCCTCATGCCCAGCCATCTGAACCAAGGACAGGTTTGCTTACTGTGCAACTaGGCCAGCTGTAGAACTGGC +
Preference number: 4 (lower is better)
Translates to: TLMEIFLLMPSHLNQGQVCLLCN*ASCRTG
Trigger: GCCAGTTCTACAGCTGGCCCAGTTGCACAGTAAGCA...AACCTGTCCTTGGTTCAGATGGCTGGGCATGAGGAGGAAAATTTCCATTAGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
CDS-3UTR CCA 90 bp GTAGAGAGCAGCCATACAGACACCACATGTGTTCCTCCTGGCTCCACACAGACGTACTCAAAGCCAAGATaGCCTTATCAAAGGCATACA +
Preference number: 4 (lower is better)
Translates to: VESSHTDTTCVPPGSTQTYSKPR*PYQRHT
Trigger: TGTATGCCTTTGATAAGGCCATCTTGGCTTTGAGTA...CGTCTGTGTGGAGCCAGGAGGAACACATGTGGTGTCTGTATGGCTGCTCTCTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
CDS-3UTR CCA 90 bp TTCTTTACCCTCCTGCTTGACATGGAGATGAGGCTCCAGGAGAGAGAGTGTAATTCACAGCAGCTACACTaGAACCACAGTGCACATGTG +
Preference number: 4 (lower is better)
Translates to: FFTLLLDMEMRLQERECNSQQLH*NHSAHV
Trigger: CACATGTGCACTGTGGTTCCAGTGTAGCTGCTGTGA...ATTACACTCTCTCTCCTGGAGCCTCATCTCCATGTCAAGCAGGAGGGTAAAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
CDS-3UTR CCA 90 bp ATGGAAATTTTCCTCCTCATGCCCAGCCATCTGAACCAAGGACAGGTTCCTTCTAAAGCCACTGCTCTTTaGAGCCACTCGAGAGGTTCA +
Preference number: 4 (lower is better)
Translates to: MEIFLLMPSHLNQGQVPSKATAL*SHSRGS
Trigger: TGAACCTCTCGAGTGGCTCCAAAGAGCAGTGGCTTT...AGAAGGAACCTGTCCTTGGTTCAGATGGCTGGGCATGAGGAGGAAAATTTCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
CDS-3UTR CCA 90 bp ACACCTAGGTTCCCAGTTTGGCTGGCCCAAGAGTTCTTCATGAGGCAAAAGAAGAGGAAGCAGTCCAGTTaGCATACCACGAATAGGTCA +
Preference number: 4 (lower is better)
Translates to: TPRFPVWLAQEFFMRQKKRKQSS*HTTNRS
Trigger: TGACCTATTCGTGGTATGCCAACTGGACTGCTTCCT...CTTCTTTTGCCTCATGAAGAACTCTTGGGCCAGCCAAACTGGGAACCTAGGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
CDS-3UTR CCA 90 bp ACACCTAGGTTCCCAGTTTGGCTGGCCCAAGAGTTCTTCATGAGGCAAAAGAAGGAAAATGGTGGCTGCTaGCAATTAGTGAGGCTAGTC +
Preference number: 4 (lower is better)
Translates to: TPRFPVWLAQEFFMRQKKENGGC*QLVRLV
Trigger: GACTAGCCTCACTAATTGCCAGCAGCCACCATTTTC...CTTCTTTTGCCTCATGAAGAACTCTTGGGCCAGCCAAACTGGGAACCTAGGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
CDS-3UTR CCA 90 bp AAGGCATACAACATGAGCCTTGTGGGCACTGCCTCACCAACCACTGGTGGCTGGGACATGATTTTGAAGTaGGGTTGTGAAAAAGGACAA +
Preference number: 4 (lower is better)
Translates to: KAYNMSLVGTASPTTGGWDMILK*GCEKGQ
Trigger: TTGTCCTTTTTCACAACCCCACTTCAAAATCATGTC...CCAGCCACCAGTGGTTGGTGAGGCAGTGCCCACAAGGCTCATGTTGTATGCCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR CCA 90 bp TGGGGGTGTGGCTTGAAAGACCTGCTCTTAGTTCCCTTCTTTACCCTCCTGCTTACAACAACGAAAAGTTaGGAGGGAAAGGGAGTAGCT +
Preference number: 4 (lower is better)
Translates to: WGCGLKDLLLVPFFTLLLTTTKS*EGKGVA
Trigger: AGCTACTCCCTTTCCCTCCCAACTTTTCGTTGTTGT...AAGCAGGAGGGTAAAGAAGGGAACTAAGAGCAGGTCTTTCAAGCCACACCCCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR CCA 90 bp AGGAACACTGCTACTCAAAGCCAAGATGGCCTTATCAAAGGCATACAACATGAGGGCCTCCCAAAGTGCTaGGATGTTGGGATTACAGGC +
Preference number: 4 (lower is better)
Translates to: RNTATQSQDGLIKGIQHEGLPKC*DVGITG
Trigger: GCCTGTAATCCCAACATCCCAGCACTTTGGGAGGCC...CTCATGTTGTATGCCTTTGATAAGGCCATCTTGGCTTTGAGTAGCAGTGTTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR CCA 90 bp ATGGAAATTTTCCTCCTCATGCCCAGCCATCTGAACCAAGGACAGGTTCCTTCTATATCCCCACTCAAATaGAAGCACACTCCCCAGCAC +
Preference number: 4 (lower is better)
Translates to: MEIFLLMPSHLNQGQVPSISPLK*KHTPQH
Trigger: GTGCTGGGGAGTGTGCTTCCATTTGAGTGGGGATAT...AGAAGGAACCTGTCCTTGGTTCAGATGGCTGGGCATGAGGAGGAAAATTTCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR CCA 90 bp GAGGCACACACCAACGGTGGACAGCCCTGCAGGAGCTTCCTGAAACTATCTACAAAAGGTGCTGATGCTTaGTCAAAAAGTGGAGTACAT +
Preference number: 4 (lower is better)
Translates to: EAHTNGGQPCRSFLKLSTKGADA*SKSGVH
Trigger: ATGTACTCCACTTTTTGACCAAGCATCAGCACCTTT...TGTAGATAGTTTCAGGAAGCTCCTGCAGGGCTGTCCACCGTTGGTGTGTGCCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR TCA 90 bp CAACCACTGGTGGCTGGTTGTGCTGGTTTTACTTGGCTCAAGGGCTGCTGGGAAAATTCTTTGTGTGCTTaGTGTCTTAGCCTAATCAAG +
Preference number: 4 (lower is better)
Translates to: QPLVAGCAGFTWLKGCWENSLCA*CLSLIK
Trigger: CTTGATTAGGCTAAGACATCAAGCACACAAAGAATT...TTCCCAGCAGCCCTTGAGCCAAGTAAAACCAGCACAACCAGCCACCAGTGGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
ENST00000545616.2
CDS-3UTR GCA 90 bp GCTGGGAAGGTTTGCTGCGACAAAGGCCTGCATGGCCTACAGAGAAACCCATCCGCTACAAATAGAGAATaGAAAAAGACGGTGAAAGTA +
Preference number: 4 (lower is better)
Translates to: AGKVCCDKGLHGLQRNPSATNRE*KKTVKV
Trigger: TACTTTCACCGTCTTTTTGCATTCTCTATTTGTAGC...GGATGGGTTTCTCTGTAGGCCATGCAGGCCTTTGTCGCAGCAAACCTTCCCAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
CDS-3UTR GCA 90 bp ACACTAATGGAAATTTTCCTCCTCATGCCCAGCCATCTGAACCAAGGACAGGTTCAAGGTGGTGCTGAGTaGAGAGTGCAGAGCATTCTT +
Preference number: 4 (lower is better)
Translates to: TLMEIFLLMPSHLNQGQVQGGAE*RVQSIL
Trigger: AAGAATGCTCTGCACTCTGCACTCAGCACCACCTTG...AACCTGTCCTTGGTTCAGATGGCTGGGCATGAGGAGGAAAATTTCCATTAGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
CDS-3UTR GCA 90 bp AAACAGCTCACTATAAACGGGGTGTTTTGTGGCATTCAACTCTGTTGTGCTACATTCCCAGGGGCCACCTaGCCCTATTTGGCCATTTCT +
Preference number: 4 (lower is better)
Translates to: KQLTINGVFCGIQLCCATFPGAT*PYLAIS
Trigger: AGAAATGGCCAAATAGGGGCAGGTGGCCCCTGGGAA...TGTAGCACAACAGAGTTGAATGCCACAAAACACCCCGTTTATAGTGAGCTGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR GCA 90 bp CATTCTCCATGTCACGCAGACTGTATTCCTAATGAAAAACTTCCCCCACTCACAAGTGAGCTACAATGGTaGCACTGCACTCCAGTCTGG +
Preference number: 4 (lower is better)
Translates to: HSPCHADCIPNEKLPPLTSELQW*HCTPVW
Trigger: CCAGACTGGAGTGCAGTGGCACCATTGTAGCTCACT...TGTGAGTGGGGGAAGTTTTTCATTAGGAATACAGTCTGCGTGACATGGAGAATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR GCA 90 bp CATCCGCAGGTGGGGGTGTGGCTTGAAAGACCTGCTCTTAGTTCCCTTCTTTACCAGAGATTCTACAAATaGCAGAAGAGTGGATGTGAT +
Preference number: 4 (lower is better)
Translates to: HPQVGVWLERPALSSLLYQRFYK*QKSGCD
Trigger: ATCACATCCACTCTTCTGGCATTTGTAGAATCTCTG...GTAAAGAAGGGAACTAAGAGCAGGTCTTTCAAGCCACACCCCCACCTGCGGATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR GCA 90 bp ATGATCTCTGGAAGGATACCCAAGGAACAAACCAATAGTAGGTATTCATGGAGTTGGAGAGGAACGGTGTaGAGTGGGCGTGAGATGCAG +
Preference number: 4 (lower is better)
Translates to: MISGRIPKEQTNSRYSWSWRGTV*SGREMQ
Trigger: CTGCATCTCACGCCCACTGCACACCGTTCCTCTCCA...ACTCCATGAATACCTACTATTGGTTTGTTCCTTGGGTATCCTTCCAGAGATCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR CCA 90 bp GGGCCAAACTACAAGACGAAAAAGTGCCCCGTTCCTGGCAATGATGTCAGAAGAAGTGTCAAAGTGCTTTaGTTGTCACAAGACCCAGAC +
Preference number: 4 (lower is better)
Translates to: GPNYKTKKCPVPGNDVRRSVKVL*LSQDPD
Trigger: GTCTGGGTCTTGTGACAACCAAAGCACTTTGACACT...TCTTCTGACATCATTGCCAGGAACGGGGCACTTTTTCGTCTTGTAGTTTGGCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR CCA 90 bp AGGAACACTGCTACTCAAAGCCAAGATGGCCTTATCAAAGGCATACAACATGAGGGTGGCTGGTTGTGCTaGTTTTACTTGGCTCAAGGG +
Preference number: 4 (lower is better)
Translates to: RNTATQSQDGLIKGIQHEGGWLC*FYLAQG
Trigger: CCCTTGAGCCAAGTAAAACCAGCACAACCAGCCACC...CTCATGTTGTATGCCTTTGATAAGGCCATCTTGGCTTTGAGTAGCAGTGTTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
CDS-3UTR CCA 90 bp CATTCTCCATGTCACGCAGACTGTATTCCTAATGAAAAACTTCCCCCACTCACAGGTGGCTGGTTGTGCTaGTTTTACTTGGCTCAAGGG +
Preference number: 4 (lower is better)
Translates to: HSPCHADCIPNEKLPPLTGGWLC*FYLAQG
Trigger: CCCTTGAGCCAAGTAAAACCAGCACAACCAGCCACC...TGTGAGTGGGGGAAGTTTTTCATTAGGAATACAGTCTGCGTGACATGGAGAATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
CDS-3UTR CCA 90 bp ATGTCAGAAGACCAAGAGGCGATAGTTACCAGCAACACTCTAGGAAGACCAGCTCGGAGAGCAGGGCTGTaGAAAAGAATTTTCCATCTG +
Preference number: 4 (lower is better)
Translates to: MSEDQEAIVTSNTLGRPARRAGL*KRIFHL
Trigger: CAGATGGAAAATTCTTTTCCACAGCCCTGCTCTCCG...AGCTGGTCTTCCTAGAGTGTTGCTGGTAACTATCGCCTCTTGGTCTTCTGACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR CCA 90 bp TGTCACAAGACCCAGACACCTAGGTTCCCAGTTTGGCTGGCCCAAGAGTTCTTCCCTGCAACTTTCAGTTaGGAGAATCCTATAAAAGCT +
Preference number: 4 (lower is better)
Translates to: CHKTQTPRFPVWLAQEFFPATFS*ENPIKA
Trigger: AGCTTTTATAGGATTCTCCCAACTGAAAGTTGCAGG...GAAGAACTCTTGGGCCAGCCAAACTGGGAACCTAGGTGTCTGGGTCTTGTGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
CDS-3UTR CCA 90 bp ACACTAATGGAAATTTTCCTCCTCATGCCCAGCCATCTGAACCAAGGACAGGTTAAGGATACCAGCCAGTaGTCCAAGAGCAGACCAGAA +
Preference number: 4 (lower is better)
Translates to: TLMEIFLLMPSHLNQGQVKDTSQ*SKSRPE
Trigger: TTCTGGTCTGCTCTTGGACCACTGGCTGGTATCCTT...AACCTGTCCTTGGTTCAGATGGCTGGGCATGAGGAGGAAAATTTCCATTAGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR CCA 90 bp GTAGAGAGCAGCCATACAGACACCACATGTGTTCCTCCTGGCTCCACACAGACGGACATGATTTTGAAGTaGGGTTGTGAAAAAGGACAA +
Preference number: 4 (lower is better)
Translates to: VESSHTDTTCVPPGSTQTDMILK*GCEKGQ
Trigger: TTGTCCTTTTTCACAACCCCACTTCAAAATCATGTC...CGTCTGTGTGGAGCCAGGAGGAACACATGTGGTGTCTGTATGGCTGCTCTCTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR CCA 90 bp TTGTGCTGGTTTTACTTGGCTCAAGGGCTGCTGGGAAGGTTTGCTGCGACAAAGCTGGGTATACTGCCCTaGATGTATCAGGATGTATTT +
Preference number: 4 (lower is better)
Translates to: LCWFYLAQGLLGRFAATKLGILP*MYQDVF
Trigger: AAATACATCCTGATACATCCAGGGCAGTATACCCAG...CTTTGTCGCAGCAAACCTTCCCAGCAGCCCTTGAGCCAAGTAAAACCAGCACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR CCA 90 bp ACACTAATGGAAATTTTCCTCCTCATGCCCAGCCATCTGAACCAAGGACAGGTTTGCTCTTGGATTAGCTaGGCATTTGGGGTAAGGGAG +
Preference number: 4 (lower is better)
Translates to: TLMEIFLLMPSHLNQGQVCSWIS*AFGVRE
Trigger: CTCCCTTACCCCAAATGCCCAGCTAATCCAAGAGCA...AACCTGTCCTTGGTTCAGATGGCTGGGCATGAGGAGGAAAATTTCCATTAGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR CCA 90 bp AAACCCATCCATCCGCAGGTGGGGGTGTGGCTTGAAAGACCTGCTCTTAGTTCCTCAATCAGAAAAATCTaGTTGTGCTCTTGGATTAGC +
Preference number: 4 (lower is better)
Translates to: KPIHPQVGVWLERPALSSSIRKI*LCSWIS
Trigger: GCTAATCCAAGAGCACAACCAGATTTTTCTGATTGA...GGAACTAAGAGCAGGTCTTTCAAGCCACACCCCCACCTGCGGATGGATGGGTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR CCA 90 bp CATCCGCAGGTGGGGGTGTGGCTTGAAAGACCTGCTCTTAGTTCCCTTCTTTACCATCTTGTAACAATTTaGGCTCTACAGCTGAATTGG +
Preference number: 4 (lower is better)
Translates to: HPQVGVWLERPALSSLLYHLVTI*ALQLNW
Trigger: CCAATTCAGCTGTAGAGCCCAAATTGTTACAAGATG...GTAAAGAAGGGAACTAAGAGCAGGTCTTTCAAGCCACACCCCCACCTGCGGATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR CCA 90 bp CAACCACTGGTGGCTGGTTGTGCTGGTTTTACTTGGCTCAAGGGCTGCTGGGAATGCTTGGTCAAAAAGTaGAGTACATCTTTGCATCTT +
Preference number: 4 (lower is better)
Translates to: QPLVAGCAGFTWLKGCWECLVKK*STSLHL
Trigger: AAGATGCAAAGATGTACTCCACTTTTTGACCAAGCA...TTCCCAGCAGCCCTTGAGCCAAGTAAAACCAGCACAACCAGCCACCAGTGGTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR TCA 90 bp TCAGTTGTACCCCTAGCAACTACTAATGGTTCAGCCACCCGTGGAGTCCAGTTGCCACAATATATATGTTaGGAGGCAGATTCTGGAATC +
Preference number: 4 (lower is better)
Translates to: SVVPLATTNGSATRGVQLPQYIC*EADSGI
Trigger: GATTCCAGAATCTGCCTCTCAACATATATATTGTGG...CAACTGGACTCCACGGGTGGCTGAACCATTAGTAGTTGCTAGGGGTACAACTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR TCA 90 bp CAGGTGGGGGTGTGGCTTGAAAGACCTGCTCTTAGTTCCCTTCTTTACCCTCCTAATTCTTTGTGTGCTTaGTGTCTTAGCCTAATCAAG +
Preference number: 4 (lower is better)
Translates to: QVGVWLERPALSSLLYPPNSLCA*CLSLIK
Trigger: CTTGATTAGGCTAAGACATCAAGCACACAAAGAATT...AGGAGGGTAAAGAAGGGAACTAAGAGCAGGTCTTTCAAGCCACACCCCCACCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
ENST00000545616.2
CDS-3UTR TCA 90 bp AAACAGCTCACTATAAACGGGGTGTTTTGTGGCATTCAACTCTGTTGTGCTACACCTCATGAAGTTTCTTaGGGCAAACCCGCAGGCTCA +
Preference number: 4 (lower is better)
Translates to: KQLTINGVFCGIQLCCATPHEVS*GKPAGS
Trigger: TGAGCCTGCGGGTTTGCCTCAAGAAACTTCATGAGG...TGTAGCACAACAGAGTTGAATGCCACAAAACACCCCGTTTATAGTGAGCTGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
CDS-3UTR TCA 90 bp AGAAACCCATCCATCCGCAGGTGGGGGTGTGGCTTGAAAGACCTGCTCTTAGTTAATATACAGACTTGGTaGGGCTGTCTTTTGTTAGTA +
Preference number: 4 (lower is better)
Translates to: RNPSIRRWGCGLKDLLLVNIQTW*GCLLLV
Trigger: TACTAACAAAAGACAGCCTCACCAAGTCTGTATATT...AACTAAGAGCAGGTCTTTCAAGCCACACCCCCACCTGCGGATGGATGGGTTTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
CDS-3UTR TCA 90 bp TGTCACAAGACCCAGACACCTAGGTTCCCAGTTTGGCTGGCCCAAGAGTTCTTCAATATACAGACTTGGTaGGGCTGTCTTTTGTTAGTA +
Preference number: 4 (lower is better)
Translates to: CHKTQTPRFPVWLAQEFFNIQTW*GCLLLV
Trigger: TACTAACAAAAGACAGCCTCACCAAGTCTGTATATT...GAAGAACTCTTGGGCCAGCCAAACTGGGAACCTAGGTGTCTGGGTCTTGTGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
CDS-3UTR GCA 90 bp TCAGTTGTACCCCTAGCAACTACTAATGGTTCAGCCACCCGTGGAGTCCAGTTGCAACAGTCTGATCCTTaGGGTAAGCTATACAATGTT +
Preference number: 4 (lower is better)
Translates to: SVVPLATTNGSATRGVQLQQSDP*GKLYNV
Trigger: AACATTGTATAGCTTACCGCAAGGATCAGACTGTTG...CAACTGGACTCCACGGGTGGCTGAACCATTAGTAGTTGCTAGGGGTACAACTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR GCA 90 bp TGGGGGTGTGGCTTGAAAGACCTGCTCTTAGTTCCCTTCTTTACCCTCCTGCTTCAACAGTCTGATCCTTaGGGTAAGCTATACAATGTT +
Preference number: 4 (lower is better)
Translates to: WGCGLKDLLLVPFFTLLLQQSDP*GKLYNV
Trigger: AACATTGTATAGCTTACCGCAAGGATCAGACTGTTG...AAGCAGGAGGGTAAAGAAGGGAACTAAGAGCAGGTCTTTCAAGCCACACCCCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
ENST00000545616.2
CDS-3UTR GCA 90 bp AGGAACACTGCTACTCAAAGCCAAGATGGCCTTATCAAAGGCATACAACATGAGGTGCTGAGTGCAGAGTaGAGAGCATTCTTGTGCTCT +
Preference number: 4 (lower is better)
Translates to: RNTATQSQDGLIKGIQHEVLSAE*RAFLCS
Trigger: AGAGCACAAGAATGCTCTGCACTCTGCACTCAGCAC...CTCATGTTGTATGCCTTTGATAAGGCCATCTTGGCTTTGAGTAGCAGTGTTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
CDS-3UTR GCA 90 bp AGGAACACTGCTACTCAAAGCCAAGATGGCCTTATCAAAGGCATACAACATGAGGAGCTCTGGGTATACTaGCCTGGATGTATCAGGATG +
Preference number: 4 (lower is better)
Translates to: RNTATQSQDGLIKGIQHEELWVY*PGCIRM
Trigger: CATCCTGATACATCCAGGGCAGTATACCCAGAGCTC...CTCATGTTGTATGCCTTTGATAAGGCCATCTTGGCTTTGAGTAGCAGTGTTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR GCA 90 bp CCTCTTCTCTCGGCAGGGGGTAGTGTCAAAGTGCTTTGGTTGTCACAAGACCCAACACATGTGTGTACATaGATAAATGATCTCTGGAAG +
Preference number: 4 (lower is better)
Translates to: PLLSAGGSVKVLWLSQDPTHVCT*INDLWK
Trigger: CTTCCAGAGATCATTTATGCATGTACACACATGTGT...TGGGTCTTGTGACAACCAAAGCACTTTGACACTACCCCCTGCCGAGAGAAGAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR GCA 90 bp GGGCCAAACTACAAGACGAAAAAGTGCCCCGTTCCTGGCAATGATGTCAGAAGAAAAGACACAAGAGCTTaGCTAAGTGACCACAACAGT +
Preference number: 4 (lower is better)
Translates to: GPNYKTKKCPVPGNDVRRKDTRA*LSDHNS
Trigger: ACTGTTGTGGTCACTTAGGCAAGCTCTTGTGTCTTT...TCTTCTGACATCATTGCCAGGAACGGGGCACTTTTTCGTCTTGTAGTTTGGCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR GCA 90 bp ACACTAATGGAAATTTTCCTCCTCATGCCCAGCCATCTGAACCAAGGACAGGTTATAGAAGCCTTCAGTTaGTGCTGCTCAAACTCCTGC +
Preference number: 4 (lower is better)
Translates to: TLMEIFLLMPSHLNQGQVIEAFS*CCSNSC
Trigger: GCAGGAGTTTGAGCAGCAGCAACTGAAGGCTTCTAT...AACCTGTCCTTGGTTCAGATGGCTGGGCATGAGGAGGAAAATTTCCATTAGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR GCA 90 bp AGCCAAGATGGCCTTATCAAAGGCATACAACATGAGCCTTGTGGGCACTGCCTCCTGGACATGTCCATCTaGTTAAGAAATCTGCTTAAG +
Preference number: 4 (lower is better)
Translates to: SQDGLIKGIQHEPCGHCLLDMSI*LRNLLK
Trigger: CTTAAGCAGATTTCTTAAGCAGATGGACATGTCCAG...GAGGCAGTGCCCACAAGGCTCATGTTGTATGCCTTTGATAAGGCCATCTTGGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR CCA 90 bp CATTCTCCATGTCACGCAGACTGTATTCCTAATGAAAAACTTCCCCCACTCACAGAAGGCGTGCTTACATaGGCAAATCCCCAACTCATC +
Preference number: 4 (lower is better)
Translates to: HSPCHADCIPNEKLPPLTEGVLT*ANPQLI
Trigger: GATGAGTTGGGGATTTGCCCATGTAAGCACGCCTTC...TGTGAGTGGGGGAAGTTTTTCATTAGGAATACAGTCTGCGTGACATGGAGAATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
CDS-3UTR CCA 90 bp ATGATCTCTGGAAGGATACCCAAGGAACAAACCAATAGTAGGTATTCATGGAGTTCGAGAGGTTCACAGTaGCTCCCTTCTGAGGCAGTG +
Preference number: 4 (lower is better)
Translates to: MISGRIPKEQTNSRYSWSSRGSQ*LPSEAV
Trigger: CACTGCCTCAGAAGGGAGCCACTGTGAACCTCTCGA...ACTCCATGAATACCTACTATTGGTTTGTTCCTTGGGTATCCTTCCAGAGATCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR CCA 90 bp AGCCAAGATGGCCTTATCAAAGGCATACAACATGAGCCTTGTGGGCACTGCCTCCCTGCAACTTTCAGTTaGGAGAATCCTATAAAAGCT +
Preference number: 4 (lower is better)
Translates to: SQDGLIKGIQHEPCGHCLPATFS*ENPIKA
Trigger: AGCTTTTATAGGATTCTCCCAACTGAAAGTTGCAGG...GAGGCAGTGCCCACAAGGCTCATGTTGTATGCCTTTGATAAGGCCATCTTGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
CDS-3UTR CCA 90 bp CATTCTCCATGTCACGCAGACTGTATTCCTAATGAAAAACTTCCCCCACTCACATGTGCTCTCCTCTCATaGCTGGAACTATCTGGGCTT +
Preference number: 4 (lower is better)
Translates to: HSPCHADCIPNEKLPPLTCALLS*LELSGL
Trigger: AAGCCCAGATAGTTCCAGCCATGAGAGGAGAGCACA...TGTGAGTGGGGGAAGTTTTTCATTAGGAATACAGTCTGCGTGACATGGAGAATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
CDS-3UTR CCA 90 bp CATCCACTCCTCTTCTCTCGGCAGGGGGTAGTGTCAAAGTGCTTTGGTTGTCACTCAATCAGAAAAATCTaGTTGTGCTCTTGGATTAGC +
Preference number: 4 (lower is better)
Translates to: HPLLFSRQGVVSKCFGCHSIRKI*LCSWIS
Trigger: GCTAATCCAAGAGCACAACCAGATTTTTCTGATTGA...GTGACAACCAAAGCACTTTGACACTACCCCCTGCCGAGAGAAGAGGAGTGGATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
3UTR CAA 72 bp TTTAAAACCAGTCCACATTCACATGTGCTGAGAAGGTaGTTAGTGGTCCCTCATCTGGGCAAAGCAGACCCA +
Preference number: 4 (lower is better)
Translates to: FKTSPHSHVLRR*LVVPHLGKADP
Trigger: TGGGTCTGCTTTGCCCAGATGAGGGACCACTAACAACCTTCTCAGCACATGTGAATGTGGACTGGTTTTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
CDS-3UTR TCA 90 bp CGTTTCTCTCCTATAAAGACACTTTCACTTTCAGTTTCGGAAGTCCAAATACTGGTGGAGCAAAGCAGTTaGCGAGGAATTGAGGCAGGC +
Preference number: 4 (lower is better)
Translates to: RFSPIKTLSLSVSEVQILVEQSS*RGIEAG
Trigger: GCCTGCCTCAATTCCTCGTCAACTGCTTTGCTCCAC...CAGTATTTGGACTTCCGAAACTGAAAGTGAAAGTGTCTTTATAGGAGAGAAACG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
CDS-3UTR TCA 90 bp ATGTCAGAAGACCAAGAGGCGATAGTTACCAGCAACACTCTAGGAAGACCAGCTAAGCAAGCCTCCTTCTaGTATTGGTCACTGAAAACA +
Preference number: 4 (lower is better)
Translates to: MSEDQEAIVTSNTLGRPAKQASF*YWSLKT
Trigger: TGTTTTCAGTGACCAATATCAGAAGGAGGCTTGCTT...AGCTGGTCTTCCTAGAGTGTTGCTGGTAACTATCGCCTCTTGGTCTTCTGACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR TCA 90 bp ACACCTAGGTTCCCAGTTTGGCTGGCCCAAGAGTTCTTCATGAGGCAAAAGAAGTCACATTTTGTATTCTaGTTTCTGGGATGGCTCTTC +
Preference number: 4 (lower is better)
Translates to: TPRFPVWLAQEFFMRQKKSHFVF*FLGWLF
Trigger: GAAGAGCCATCCCAGAAATCAGAATACAAAATGTGA...CTTCTTTTGCCTCATGAAGAACTCTTGGGCCAGCCAAACTGGGAACCTAGGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR GCA 90 bp AATACTGAGGCACACACCAACGGTGGACAGCCCTGCAGGAGCTTCCTGAAACTAGCTACAAATAGAGAATaGAAAAAGACGGTGAAAGTA +
Preference number: 4 (lower is better)
Translates to: NTEAHTNGGQPCRSFLKLATNRE*KKTVKV
Trigger: TACTTTCACCGTCTTTTTGCATTCTCTATTTGTAGC...TAGTTTCAGGAAGCTCCTGCAGGGCTGTCCACCGTTGGTGTGTGCCTCAGTATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
CDS-3UTR GCA 90 bp CAGGTGGGGGTGTGGCTTGAAAGACCTGCTCTTAGTTCCCTTCTTTACCCTCCTGCTACAAATAGAGAATaGAAAAAGACGGTGAAAGTA +
Preference number: 4 (lower is better)
Translates to: QVGVWLERPALSSLLYPPATNRE*KKTVKV
Trigger: TACTTTCACCGTCTTTTTGCATTCTCTATTTGTAGC...AGGAGGGTAAAGAAGGGAACTAAGAGCAGGTCTTTCAAGCCACACCCCCACCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
CDS-3UTR GCA 90 bp AAACAGCTCACTATAAACGGGGTGTTTTGTGGCATTCAACTCTGTTGTGCTACATGCAGAGCATTCTTGTaGTCTCCTCTCATGGCTGGA +
Preference number: 4 (lower is better)
Translates to: KQLTINGVFCGIQLCCATCRAFL*SPLMAG
Trigger: TCCAGCCATGAGAGGAGAGCACAAGAATGCTCTGCA...TGTAGCACAACAGAGTTGAATGCCACAAAACACCCCGTTTATAGTGAGCTGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
CDS-3UTR GCA 90 bp TCAGTTGTACCCCTAGCAACTACTAATGGTTCAGCCACCCGTGGAGTCCAGTTGACACATGTGTGTACATaGATAAATGATCTCTGGAAG +
Preference number: 4 (lower is better)
Translates to: SVVPLATTNGSATRGVQLTHVCT*INDLWK
Trigger: CTTCCAGAGATCATTTATGCATGTACACACATGTGT...CAACTGGACTCCACGGGTGGCTGAACCATTAGTAGTTGCTAGGGGTACAACTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR GCA 90 bp ATGATCTCTGGAAGGATACCCAAGGAACAAACCAATAGTAGGTATTCATGGAGTCTCGGCCTCCCAAAGTaGTGGGATGTTGGGATTACA +
Preference number: 4 (lower is better)
Translates to: MISGRIPKEQTNSRYSWSLGLPK*WDVGIT
Trigger: TGTAATCCCAACATCCCAGCACTTTGGGAGGCCGAG...ACTCCATGAATACCTACTATTGGTTTGTTCCTTGGGTATCCTTCCAGAGATCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR CCA 90 bp CGTTTCTCTCCTATAAAGACACTTTCACTTTCAGTTTCGGAAGTCCAAATACTGATGGCTGGAACTATCTaGGCTTTGCGCCCTGGTCCA +
Preference number: 4 (lower is better)
Translates to: RFSPIKTLSLSVSEVQILMAGTI*ALRPGP
Trigger: TGGACCAGGGCGCAAAGCCCAGATAGTTCCAGCCAT...CAGTATTTGGACTTCCGAAACTGAAAGTGAAAGTGTCTTTATAGGAGAGAAACG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
CDS-3UTR CCA 90 bp AAACAGCTCACTATAAACGGGGTGTTTTGTGGCATTCAACTCTGTTGTGCTACATGCTCTTGGATTAGCTaGGCATTTGGGGTAAGGGAG +
Preference number: 4 (lower is better)
Translates to: KQLTINGVFCGIQLCCATCSWIS*AFGVRE
Trigger: CTCCCTTACCCCAAATGCCCAGCTAATCCAAGAGCA...TGTAGCACAACAGAGTTGAATGCCACAAAACACCCCGTTTATAGTGAGCTGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR TCA 90 bp AAACAGCTCACTATAAACGGGGTGTTTTGTGGCATTCAACTCTGTTGTGCTACATGTTCCTATCAATCATaGTGGCAGAGGAGCCCATGT +
Preference number: 4 (lower is better)
Translates to: KQLTINGVFCGIQLCCATCSYQS*WQRSPC
Trigger: ACATGGGCTCCTCTGCCATCATGATTGATAGGAACA...TGTAGCACAACAGAGTTGAATGCCACAAAACACCCCGTTTATAGTGAGCTGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR TCA 90 bp CATTCTCCATGTCACGCAGACTGTATTCCTAATGAAAAACTTCCCCCACTCACAAGTAGGAGCGTTCCTTaGATACACTTGTCTGGTATC +
Preference number: 4 (lower is better)
Translates to: HSPCHADCIPNEKLPPLTSRSVP*IHLSGI
Trigger: GATACCAGACAAGTGTATTCAAGGAACGCTCCTACT...TGTGAGTGGGGGAAGTTTTTCATTAGGAATACAGTCTGCGTGACATGGAGAATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR GCA 90 bp ATGGAAATTTTCCTCCTCATGCCCAGCCATCTGAACCAAGGACAGGTTCCTTCTCAGAGATTCTACAAATaGCAGAAGAGTGGATGTGAT +
Preference number: 4 (lower is better)
Translates to: MEIFLLMPSHLNQGQVPSQRFYK*QKSGCD
Trigger: ATCACATCCACTCTTCTGGCATTTGTAGAATCTCTG...AGAAGGAACCTGTCCTTGGTTCAGATGGCTGGGCATGAGGAGGAAAATTTCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR TCA 90 bp TTCTTTACCCTCCTGCTTGACATGGAGATGAGGCTCCAGGAGAGAGAGTGTAATAATATACAGACTTGGTaGGGCTGTCTTTTGTTAGTA +
Preference number: 4 (lower is better)
Translates to: FFTLLLDMEMRLQERECNNIQTW*GCLLLV
Trigger: TACTAACAAAAGACAGCCTCACCAAGTCTGTATATT...ATTACACTCTCTCTCCTGGAGCCTCATCTCCATGTCAAGCAGGAGGGTAAAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
CDS-3UTR CCA 90 bp AAACAGCTCACTATAAACGGGGTGTTTTGTGGCATTCAACTCTGTTGTGCTACAAGTGTCAAAGTGCTTTaGTTGTCACAAGACCCAGAC +
Preference number: 4 (lower is better)
Translates to: KQLTINGVFCGIQLCCATSVKVL*LSQDPD
Trigger: GTCTGGGTCTTGTGACAACCAAAGCACTTTGACACT...TGTAGCACAACAGAGTTGAATGCCACAAAACACCCCGTTTATAGTGAGCTGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
CDS-3UTR CCA 90 bp GCGTTTCTCTCCTATAAAGACACTTTCACTTTCAGTTTCGGAAGTCCAAATACTCCAACCACTGGTGGCTaGTTGTGCTGGTTTTACTTG +
Preference number: 4 (lower is better)
Translates to: AFLSYKDTFTFSFGSPNTPTTGG*LCWFYL
Trigger: CAAGTAAAACCAGCACAACCAGCCACCAGTGGTTGG...AGTATTTGGACTTCCGAAACTGAAAGTGAAAGTGTCTTTATAGGAGAGAAACGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
CDS-3UTR CCA 90 bp AAACAGCTCACTATAAACGGGGTGTTTTGTGGCATTCAACTCTGTTGTGCTACAAAACGGGGTGTTTTGTaGCATTCAACTCTGTTGTGC +
Preference number: 4 (lower is better)
Translates to: KQLTINGVFCGIQLCCATKRGVL*HSTLLC
Trigger: GCACAACAGAGTTGAATGCCACAAAACACCCCGTTT...TGTAGCACAACAGAGTTGAATGCCACAAAACACCCCGTTTATAGTGAGCTGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
CDS-3UTR CCA 90 bp CGTTTCTCTCCTATAAAGACACTTTCACTTTCAGTTTCGGAAGTCCAAATACTGTGTGCTCTCCTCTCATaGCTGGAACTATCTGGGCTT +
Preference number: 4 (lower is better)
Translates to: RFSPIKTLSLSVSEVQILCALLS*LELSGL
Trigger: AAGCCCAGATAGTTCCAGCCATGAGAGGAGAGCACA...CAGTATTTGGACTTCCGAAACTGAAAGTGAAAGTGTCTTTATAGGAGAGAAACG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
CDS-3UTR CCA 90 bp ACACTAATGGAAATTTTCCTCCTCATGCCCAGCCATCTGAACCAAGGACAGGTTTGCATAAATGATCTCTaGAAGGATACCCAAGGAACA +
Preference number: 4 (lower is better)
Translates to: TLMEIFLLMPSHLNQGQVCINDL*KDTQGT
Trigger: TGTTCCTTGGGTATCCTTCCAGAGATCATTTATGCA...AACCTGTCCTTGGTTCAGATGGCTGGGCATGAGGAGGAAAATTTCCATTAGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR GCA 90 bp ATGATCTCTGGAAGGATACCCAAGGAACAAACCAATAGTAGGTATTCATGGAGTATGGAAAATGGTGGCTaGTGGCAATTAGTGAGGCTA +
Preference number: 4 (lower is better)
Translates to: MISGRIPKEQTNSRYSWSMENGG*WQLVRL
Trigger: TAGCCTCACTAATTGCCAGCAGCCACCATTTTCCAT...ACTCCATGAATACCTACTATTGGTTTGTTCCTTGGGTATCCTTCCAGAGATCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR CCA 90 bp ATGATCTCTGGAAGGATACCCAAGGAACAAACCAATAGTAGGTATTCATGGAGTTTCCATGGAAAATGGTaGCTGCTGGCAATTAGTGAG +
Preference number: 4 (lower is better)
Translates to: MISGRIPKEQTNSRYSWSFHGKW*LLAISE
Trigger: CTCACTAATTGCCAGCAGCCACCATTTTCCATGGAA...ACTCCATGAATACCTACTATTGGTTTGTTCCTTGGGTATCCTTCCAGAGATCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR TCA 90 bp CATTCTCCATGTCACGCAGACTGTATTCCTAATGAAAAACTTCCCCCACTCACAAATTCTTTGTGTGCTTaGTGTCTTAGCCTAATCAAG +
Preference number: 4 (lower is better)
Translates to: HSPCHADCIPNEKLPPLTNSLCA*CLSLIK
Trigger: CTTGATTAGGCTAAGACATCAAGCACACAAAGAATT...TGTGAGTGGGGGAAGTTTTTCATTAGGAATACAGTCTGCGTGACATGGAGAATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
CDS-3UTR TCA 90 bp CATTCTCCATGTCACGCAGACTGTATTCCTAATGAAAAACTTCCCCCACTCACATTTACTAAAGAACCGTaGACCAGCATTTTCCAGTTA +
Preference number: 4 (lower is better)
Translates to: HSPCHADCIPNEKLPPLTFTKEP*TSIFQL
Trigger: TAACTGGAAAATGCTGGTTCACGGTTCTTTAGTAAA...TGTGAGTGGGGGAAGTTTTTCATTAGGAATACAGTCTGCGTGACATGGAGAATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR CCA 90 bp CATTCTCCATGTCACGCAGACTGTATTCCTAATGAAAAACTTCCCCCACTCACATGCTTGGTCAAAAAGTaGAGTACATCTTTGCATCTT +
Preference number: 4 (lower is better)
Translates to: HSPCHADCIPNEKLPPLTCLVKK*STSLHL
Trigger: AAGATGCAAAGATGTACTCCACTTTTTGACCAAGCA...TGTGAGTGGGGGAAGTTTTTCATTAGGAATACAGTCTGCGTGACATGGAGAATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR CCA 90 bp CGTTTCTCTCCTATAAAGACACTTTCACTTTCAGTTTCGGAAGTCCAAATACTGCCTGCAACTTTCAGTTaGGAGAATCCTATAAAAGCT +
Preference number: 4 (lower is better)
Translates to: RFSPIKTLSLSVSEVQILPATFS*ENPIKA
Trigger: AGCTTTTATAGGATTCTCCCAACTGAAAGTTGCAGG...CAGTATTTGGACTTCCGAAACTGAAAGTGAAAGTGTCTTTATAGGAGAGAAACG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
CDS CCA 90 bp GCCCGGCCGGCCGAGGCGCCGGGAGAGTGTGTGTGTGTGGGAGGCTaGCGCGGGCCCGCGGTCTCCTCAGCATCCCGAACCCGGAGCGGC +
Preference number: 5 (lower is better)
Translates to: ARPAEAPGECVCVGG*RGPAVSSASRTRSG
Trigger: GCCGCTCCGGGTTCGGGATGCTGAGGAGACCGCGGGCCCGCGCCAGCCTCCCACACACACACACTCTCCCGGCGCCTCGGCCGGCCGGGC
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336095.10
CDS CCA 90 bp CACACCGCGCCCGGCCGGCCGAGGCGCCGGGAGAGTGTGTGTGTGTaGGAGGCTGGCGCGGGCCCGCGGTCTCCTCAGCATCCCGAACCC +
Preference number: 5 (lower is better)
Translates to: HTAPGRPRRRESVCV*EAGAGPRSPQHPEP
Trigger: GGGTTCGGGATGCTGAGGAGACCGCGGGCCCGCGCCAGCCTCCCACACACACACACTCTCCCGGCGCCTCGGCCGGCCGGGCGCGGTGTG
77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336095.10
CDS-3UTR CAA 90 bp CAACCACTGGTGGCTGGTTGTGCTGGTTTTACTTGGCTCAAGGGCTGCTGGGAAGGTGGCGGGCACCTGTaGTCCCAGCTCCCGAGGCGG +
Preference number: 5 (lower is better)
Translates to: QPLVAGCAGFTWLKGCWEGGGHL*SQLPRR
Trigger: CCGCCTCGGGAGCTGGGACAACAGGTGCCCGCCACC...TTCCCAGCAGCCCTTGAGCCAAGTAAAACCAGCACAACCAGCCACCAGTGGTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR CAA 90 bp TGTCACAAGACCCAGACACCTAGGTTCCCAGTTTGGCTGGCCCAAGAGTTCTTCGGTGGCGGGCACCTGTaGTCCCAGCTCCCGAGGCGG +
Preference number: 5 (lower is better)
Translates to: CHKTQTPRFPVWLAQEFFGGGHL*SQLPRR
Trigger: CCGCCTCGGGAGCTGGGACAACAGGTGCCCGCCACC...GAAGAACTCTTGGGCCAGCCAAACTGGGAACCTAGGTGTCTGGGTCTTGTGACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR CAA 90 bp GGATGTGGGCAGCCTCCTGGATCACTCAGGGACAGTGTGGACTCAGGGCCCACTGCCACCTGCCCCTATTaGGCCATTTCTGTCCTGCCT +
Preference number: 5 (lower is better)
Translates to: GCGQPPGSLRDSVDSGPTATCPY*AISVLP
Trigger: AGGCAGGACAGAAATGGCCAAATAGGGGCAGGTGGC...AGTGGGCCCTGAGTCCACACTGTCCCTGAGTGATCCAGGAGGCTGCCCACATCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR CAA 90 bp GGCCTGCATGGCCTACAGAGAAACCCATCCATCCGCAGGTGGGGGTGTGGCTTGACCACTGGTCCTCACTaGGAACTGGCCAAGGTAGGG +
Preference number: 5 (lower is better)
Translates to: GLHGLQRNPSIRRWGCGLTTGPH*ELAKVG
Trigger: CCCTACCTTGGCCAGTTCCAAGTGAGGACCAGTGGT...CAAGCCACACCCCCACCTGCGGATGGATGGGTTTCTCTGTAGGCCATGCAGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR CAA 90 bp GGATGTGGGCAGCCTCCTGGATCACTCAGGGACAGTGTGGACTCAGGGCCCACTACCACTGGTGGCTGGTaGTGCTGGTTTTACTTGGCT +
Preference number: 5 (lower is better)
Translates to: GCGQPPGSLRDSVDSGPTTTGGW*CWFYLA
Trigger: AGCCAAGTAAAACCAGCACAACCAGCCACCAGTGGT...AGTGGGCCCTGAGTCCACACTGTCCCTGAGTGATCCAGGAGGCTGCCCACATCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
CDS-3UTR CAA 90 bp CCACTCCTCTTCTCTCGGCAGGGGGTAGTGTCAAAGTGCTTTGGTTGTCACAAGCCTGGGAGGCGGAGCTaGCAGTGGGCCAAGATCGTG +
Preference number: 5 (lower is better)
Translates to: PLLFSRQGVVSKCFGCHKPGRRS*QWAKIV
Trigger: CACGATCTTGGCCCACTGCAAGCTCCGCCTCCCAGG...CTTGTGACAACCAAAGCACTTTGACACTACCCCCTGCCGAGAGAAGAGGAGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR CAA 90 bp CCTACAGAGAAACCCATCCATCCGCAGGTGGGGGTGTGGCTTGAAAGACCTGCTGCAGATCCACCAGGCTaGGGACTGGCAAAGGGAGCT +
Preference number: 5 (lower is better)
Translates to: PTEKPIHPQVGVWLERPAADPPG*GLAKGA
Trigger: AGCTCCCTTTGCCAGTCCCAAGCCTGGTGGATCTGC...AGCAGGTCTTTCAAGCCACACCCCCACCTGCGGATGGATGGGTTTCTCTGTAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR CAA 90 bp AGGAGGGGGAGAGGCCAAAGGGTCGGCATTCCCTTCATCCAGCCGGGCCAGAAGAACTCATCTCGAGGCTaGAAGTCTTCTAGGCACACT +
Preference number: 5 (lower is better)
Translates to: RRGRGQRVGIPFIQPGQKNSSRG*KSSRHT
Trigger: AGTGTGCCTAGAAGACTTCAAGCCTCGAGATGAGTT...CTTCTGGCCCGGCTGGATGAAGGGAATGCCGACCCTTTGGCCTCTCCCCCTCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
CDS-3UTR CAA 90 bp CTTGAGGCAAACCCGCAGGCTCATCCACTCCTCTTCTCTCGGCAGGGGGTAGTGAGGTGGGGGTGTGGCTaGAAAGACCTGCTCTTAGTT +
Preference number: 5 (lower is better)
Translates to: LEANPQAHPLLFSRQGVVRWGCG*KDLLLV
Trigger: AACTAAGAGCAGGTCTTTCAAGCCACACCCCCACCT...CACTACCCCCTGCCGAGAGAAGAGGAGTGGATGAGCCTGCGGGTTTGCCTCAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
ENST00000545616.2
CDS-3UTR CAA 90 bp CAACCACTGGTGGCTGGTTGTGCTGGTTTTACTTGGCTCAAGGGCTGCTGGGAAGGCTGCTGGGAAGGTTaGCTGCGACAAAGGCCTGCA +
Preference number: 5 (lower is better)
Translates to: QPLVAGCAGFTWLKGCWEGCWEG*LRQRPA
Trigger: TGCAGGCCTTTGTCGCAGCAAACCTTCCCAGCAGCC...TTCCCAGCAGCCCTTGAGCCAAGTAAAACCAGCACAACCAGCCACCAGTGGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
ENST00000545616.2
CDS-3UTR CAA 90 bp CGCAGGTGGGGGTGTGGCTTGAAAGACCTGCTCTTAGTTCCCTTCTTTACCCTCGGCTGCTGGGAAGGTTaGCTGCGACAAAGGCCTGCA +
Preference number: 5 (lower is better)
Translates to: RRWGCGLKDLLLVPFFTLGCWEG*LRQRPA
Trigger: TGCAGGCCTTTGTCGCAGCAAACCTTCCCAGCAGCC...GAGGGTAAAGAAGGGAACTAAGAGCAGGTCTTTCAAGCCACACCCCCACCTGCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
ENST00000545616.2
CDS-3UTR CAA 90 bp CCTACAGAGAAACCCATCCATCCGCAGGTGGGGGTGTGGCTTGAAAGACCTGCTGGAACTATCTGGGCTTaGCGCCCTGGTCCAGTGCTA +
Preference number: 5 (lower is better)
Translates to: PTEKPIHPQVGVWLERPAGTIWA*RPGPVL
Trigger: TAGCACTGGACCAGGGCGCAAAGCCCAGATAGTTCC...AGCAGGTCTTTCAAGCCACACCCCCACCTGCGGATGGATGGGTTTCTCTGTAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
CDS-3UTR CAA 90 bp GCTGGGAAGGTTTGCTGCGACAAAGGCCTGCATGGCCTACAGAGAAACCCATCCGCCACCTGCCCCTATTaGGCCATTTCTGTCCTGCCT +
Preference number: 5 (lower is better)
Translates to: AGKVCCDKGLHGLQRNPSATCPY*AISVLP
Trigger: AGGCAGGACAGAAATGGCCAAATAGGGGCAGGTGGC...GGATGGGTTTCTCTGTAGGCCATGCAGGCCTTTGTCGCAGCAAACCTTCCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR CAA 90 bp CAGGTGGGGGTGTGGCTTGAAAGACCTGCTCTTAGTTCCCTTCTTTACCCTCCTGGCTGCTGGGAAGGTTaGCTGCGACAAAGGCCTGCA +
Preference number: 5 (lower is better)
Translates to: QVGVWLERPALSSLLYPPGCWEG*LRQRPA
Trigger: TGCAGGCCTTTGTCGCAGCAAACCTTCCCAGCAGCC...AGGAGGGTAAAGAAGGGAACTAAGAGCAGGTCTTTCAAGCCACACCCCCACCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
ENST00000545616.2
CDS-3UTR CAA 90 bp CCTCTTCTCTCGGCAGGGGGTAGTGTCAAAGTGCTTTGGTTGTCACAAGACCCAGGCTGCTGGGAAGGTTaGCTGCGACAAAGGCCTGCA +
Preference number: 5 (lower is better)
Translates to: PLLSAGGSVKVLWLSQDPGCWEG*LRQRPA
Trigger: TGCAGGCCTTTGTCGCAGCAAACCTTCCCAGCAGCC...TGGGTCTTGTGACAACCAAAGCACTTTGACACTACCCCCTGCCGAGAGAAGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
ENST00000545616.2
CDS-3UTR CAA 90 bp GTGGCAGCTGGTGTCCTAGGTAGAGAGCAGCCATACAGACACCACATGTGTTCCACCACTGGTCCTCACTaGGAACTGGCCAAGGTAGGG +
Preference number: 5 (lower is better)
Translates to: VAAGVLGREQPYRHHMCSTTGPH*ELAKVG
Trigger: CCCTACCTTGGCCAGTTCCAAGTGAGGACCAGTGGT...GGAACACATGTGGTGTCTGTATGGCTGCTCTCTACCTAGGACACCAGCTGCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR CAA 90 bp GTTTGCTGCGACAAAGGCCTGCATGGCCTACAGAGAAACCCATCCATCCGCAGGAAAAGCCACTGCTCTTaGGAGCCACTCGAGAGGTTC +
Preference number: 5 (lower is better)
Translates to: VCCDKGLHGLQRNPSIRRKSHCS*EPLERF
Trigger: GAACCTCTCGAGTGGCTCCAAAGAGCAGTGGCTTTT...CCTGCGGATGGATGGGTTTCTCTGTAGGCCATGCAGGCCTTTGTCGCAGCAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
CDS-3UTR CAA 90 bp AAGGCATACAACATGAGCCTTGTGGGCACTGCCTCACCAACCACTGGTGGCTGGAAAAGCCACTGCTCTTaGGAGCCACTCGAGAGGTTC +
Preference number: 5 (lower is better)
Translates to: KAYNMSLVGTASPTTGGWKSHCS*EPLERF
Trigger: GAACCTCTCGAGTGGCTCCAAAGAGCAGTGGCTTTT...CCAGCCACCAGTGGTTGGTGAGGCAGTGCCCACAAGGCTCATGTTGTATGCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
CDS-3UTR CAA 90 bp AAGGTTTGCTGCGACAAAGGCCTGCATGGCCTACAGAGAAACCCATCCATCCGCGCAGTTGACGAGGAATaGAGGCAGGCGCTCCTAAGA +
Preference number: 5 (lower is better)
Translates to: KVCCDKGLHGLQRNPSIRAVDEE*RQALLR
Trigger: TCTTAGGAGCGCCTGCCTCAATTCCTCGTCAACTGC...GCGGATGGATGGGTTTCTCTGTAGGCCATGCAGGCCTTTGTCGCAGCAAACCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
CDS-3UTR CAA 90 bp CTGCATGGCCTACAGAGAAACCCATCCATCCGCAGGTGGGGGTGTGGCTTGAAACTAGTGATACTAGGCTaGCTGCAGGAGGATGTCACG +
Preference number: 5 (lower is better)
Translates to: LHGLQRNPSIRRWGCGLKLVILG*LQEDVT
Trigger: CGTGACATCCTCCTGCAGCAAGCCTAGTATCACTAG...TTTCAAGCCACACCCCCACCTGCGGATGGATGGGTTTCTCTGTAGGCCATGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
CDS-3UTR CAA 90 bp TGGGGGTGTGGCTTGAAAGACCTGCTCTTAGTTCCCTTCTTTACCCTCCTGCTTGCAGATCCACCAGGCTaGGGACTGGCAAAGGGAGCT +
Preference number: 5 (lower is better)
Translates to: WGCGLKDLLLVPFFTLLLADPPG*GLAKGA
Trigger: AGCTCCCTTTGCCAGTCCCAAGCCTGGTGGATCTGC...AAGCAGGAGGGTAAAGAAGGGAACTAAGAGCAGGTCTTTCAAGCCACACCCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR CAA 90 bp GGCCTACAGAGAAACCCATCCATCCGCAGGTGGGGGTGTGGCTTGAAAGACCTGAACTCATCTCGAGGCTaGAAGTCTTCTAGGCACACT +
Preference number: 5 (lower is better)
Translates to: GLQRNPSIRRWGCGLKDLNSSRG*KSSRHT
Trigger: AGTGTGCCTAGAAGACTTCAAGCCTCGAGATGAGTT...CAGGTCTTTCAAGCCACACCCCCACCTGCGGATGGATGGGTTTCTCTGTAGGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
ENST00000545616.2
CDS-3UTR CAA 90 bp GCACTGCCTCACCAACCACTGGTGGCTGGTTGTGCTGGTTTTACTTGGCTCAAGAGGTGGGGGTGTGGCTaGAAAGACCTGCTCTTAGTT +
Preference number: 5 (lower is better)
Translates to: ALPHQPLVAGCAGFTWLKRWGCG*KDLLLV
Trigger: AACTAAGAGCAGGTCTTTCAAGCCACACCCCCACCT...CTTGAGCCAAGTAAAACCAGCACAACCAGCCACCAGTGGTTGGTGAGGCAGTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
ENST00000545616.2
CDS-3UTR CAA 90 bp CAGGTGGGGGTGTGGCTTGAAAGACCTGCTCTTAGTTCCCTTCTTTACCCTCCTGCAGTTGACGAGGAATaGAGGCAGGCGCTCCTAAGA +
Preference number: 5 (lower is better)
Translates to: QVGVWLERPALSSLLYPPAVDEE*RQALLR
Trigger: TCTTAGGAGCGCCTGCCTCAATTCCTCGTCAACTGC...AGGAGGGTAAAGAAGGGAACTAAGAGCAGGTCTTTCAAGCCACACCCCCACCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
CDS-3UTR CAA 90 bp CCACTCCTCTTCTCTCGGCAGGGGGTAGTGTCAAAGTGCTTTGGTTGTCACAAGGCAGTTGACGAGGAATaGAGGCAGGCGCTCCTAAGA +
Preference number: 5 (lower is better)
Translates to: PLLFSRQGVVSKCFGCHKAVDEE*RQALLR
Trigger: TCTTAGGAGCGCCTGCCTCAATTCCTCGTCAACTGC...CTTGTGACAACCAAAGCACTTTGACACTACCCCCTGCCGAGAGAAGAGGAGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
CDS-3UTR CAA 90 bp CCTACAGAGAAACCCATCCATCCGCAGGTGGGGGTGTGGCTTGAAAGACCTGCTCATGTGCTGAGAAGGTaGTTAGTGGTCCCTCATCTG +
Preference number: 5 (lower is better)
Translates to: PTEKPIHPQVGVWLERPAHVLRR*LVVPHL
Trigger: CAGATGAGGGACCACTAACAACCTTCTCAGCACATG...AGCAGGTCTTTCAAGCCACACCCCCACCTGCGGATGGATGGGTTTCTCTGTAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
CDS-3UTR CAA 90 bp GCATGGCCTACAGAGAAACCCATCCATCCGCAGGTGGGGGTGTGGCTTGAAAGACTACAGAGCCTGATCTaGAGCATCCTGTCGCAGATA +
Preference number: 5 (lower is better)
Translates to: AWPTEKPIHPQVGVWLERLQSLI*SILSQI
Trigger: TATCTGCGACAGGATGCTCAAGATCAGGCTCTGTAG...TCTTTCAAGCCACACCCCCACCTGCGGATGGATGGGTTTCTCTGTAGGCCATGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR CAA 90 bp TGTCACAAGACCCAGACACCTAGGTTCCCAGTTTGGCTGGCCCAAGAGTTCTTCAGGTGGGGGTGTGGCTaGAAAGACCTGCTCTTAGTT +
Preference number: 5 (lower is better)
Translates to: CHKTQTPRFPVWLAQEFFRWGCG*KDLLLV
Trigger: AACTAAGAGCAGGTCTTTCAAGCCACACCCCCACCT...GAAGAACTCTTGGGCCAGCCAAACTGGGAACCTAGGTGTCTGGGTCTTGTGACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
ENST00000545616.2
CDS-3UTR CAA 90 bp CCTCTTCTCTCGGCAGGGGGTAGTGTCAAAGTGCTTTGGTTGTCACAAGACCCAAGGTGGGGGTGTGGCTaGAAAGACCTGCTCTTAGTT +
Preference number: 5 (lower is better)
Translates to: PLLSAGGSVKVLWLSQDPRWGCG*KDLLLV
Trigger: AACTAAGAGCAGGTCTTTCAAGCCACACCCCCACCT...TGGGTCTTGTGACAACCAAAGCACTTTGACACTACCCCCTGCCGAGAGAAGAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
ENST00000545616.2
CDS-3UTR CAA 90 bp ATCAAAGGCATACAACATGAGCCTTGTGGGCACTGCCTCACCAACCACTGGTGGTTGTGCTGGTTTTACTaGGCTCAAGGGCTGCTGGGA +
Preference number: 5 (lower is better)
Translates to: IKGIQHEPCGHCLTNHWWLCWFY*AQGLLG
Trigger: TCCCAGCAGCCCTTGAGCCAAGTAAAACCAGCACAA...CCACCAGTGGTTGGTGAGGCAGTGCCCACAAGGCTCATGTTGTATGCCTTTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
CDS-3UTR CAA 90 bp TGCTTTGGTTGTCACAAGACCCAGACACCTAGGTTCCCAGTTTGGCTGGCCCAATTGTGCTGGTTTTACTaGGCTCAAGGGCTGCTGGGA +
Preference number: 5 (lower is better)
Translates to: CFGCHKTQTPRFPVWLAQLCWFY*AQGLLG
Trigger: TCCCAGCAGCCCTTGAGCCAAGTAAAACCAGCACAA...TTGGGCCAGCCAAACTGGGAACCTAGGTGTCTGGGTCTTGTGACAACCAAAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
ENST00000545616.2
CDS-3UTR CAA 90 bp CAGGTGGGGGTGTGGCTTGAAAGACCTGCTCTTAGTTCCCTTCTTTACCCTCCTTTGTGCTGGTTTTACTaGGCTCAAGGGCTGCTGGGA +
Preference number: 5 (lower is better)
Translates to: QVGVWLERPALSSLLYPPLCWFY*AQGLLG
Trigger: TCCCAGCAGCCCTTGAGCCAAGTAAAACCAGCACAA...AGGAGGGTAAAGAAGGGAACTAAGAGCAGGTCTTTCAAGCCACACCCCCACCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
ENST00000545616.2
CDS-3UTR CAA 90 bp CCTCTTCTCTCGGCAGGGGGTAGTGTCAAAGTGCTTTGGTTGTCACAAGACCCAACCACTGGTGGCTGGTaGTGCTGGTTTTACTTGGCT +
Preference number: 5 (lower is better)
Translates to: PLLSAGGSVKVLWLSQDPTTGGW*CWFYLA
Trigger: AGCCAAGTAAAACCAGCACAACCAGCCACCAGTGGT...TGGGTCTTGTGACAACCAAAGCACTTTGACACTACCCCCTGCCGAGAGAAGAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
ENST00000545616.2
CDS-3UTR CAA 90 bp TTCTCAAAAAGCCACTGCTCTTTGGAGCCACTCGAGAGGTTCACAGTGGCTCCCAAAAGCCACTGCTCTTaGGAGCCACTCGAGAGGTTC +
Preference number: 5 (lower is better)
Translates to: FSKSHCSLEPLERFTVAPKSHCS*EPLERF
Trigger: GAACCTCTCGAGTGGCTCCAAAGAGCAGTGGCTTTT...GGGAGCCACTGTGAACCTCTCGAGTGGCTCCAAAGAGCAGTGGCTTTTTGAGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
CDS-3UTR CAA 90 bp TGTCACAAGACCCAGACACCTAGGTTCCCAGTTTGGCTGGCCCAAGAGTTCTTCGAGTGCAGAGCATTCTaGTGCTCTCCTCTCATGGCT +
Preference number: 5 (lower is better)
Translates to: CHKTQTPRFPVWLAQEFFECRAF*CSPLMA
Trigger: AGCCATGAGAGGAGAGCACAAGAATGCTCTGCACTC...GAAGAACTCTTGGGCCAGCCAAACTGGGAACCTAGGTGTCTGGGTCTTGTGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
CDS-3UTR CAA 90 bp CAACCACTGGTGGCTGGTTGTGCTGGTTTTACTTGGCTCAAGGGCTGCTGGGAACATGTGCTGAGAAGGTaGTTAGTGGTCCCTCATCTG +
Preference number: 5 (lower is better)
Translates to: QPLVAGCAGFTWLKGCWEHVLRR*LVVPHL
Trigger: CAGATGAGGGACCACTAACAACCTTCTCAGCACATG...TTCCCAGCAGCCCTTGAGCCAAGTAAAACCAGCACAACCAGCCACCAGTGGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
CDS-3UTR CAA 90 bp TGTCACAAGACCCAGACACCTAGGTTCCCAGTTTGGCTGGCCCAAGAGTTCTTCCTAGTGATACTAGGCTaGCTGCAGGAGGATGTCACG +
Preference number: 5 (lower is better)
Translates to: CHKTQTPRFPVWLAQEFFLVILG*LQEDVT
Trigger: CGTGACATCCTCCTGCAGCAAGCCTAGTATCACTAG...GAAGAACTCTTGGGCCAGCCAAACTGGGAACCTAGGTGTCTGGGTCTTGTGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
CDS-3UTR CAA 90 bp AGAAACCCATCCATCCGCAGGTGGGGGTGTGGCTTGAAAGACCTGCTCTTAGTTCTAGTGATACTAGGCTaGCTGCAGGAGGATGTCACG +
Preference number: 5 (lower is better)
Translates to: RNPSIRRWGCGLKDLLLVLVILG*LQEDVT
Trigger: CGTGACATCCTCCTGCAGCAAGCCTAGTATCACTAG...AACTAAGAGCAGGTCTTTCAAGCCACACCCCCACCTGCGGATGGATGGGTTTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
CDS-3UTR CAA 90 bp AAAAGTGCCCCGTTCCTGGCAATGATGTCAGAAGACCAAGAGGCGATAGTTACCACCCGTGGAGTCCAGTaGGGGCTGAGTTATGCTCCA +
Preference number: 5 (lower is better)
Translates to: KSAPFLAMMSEDQEAIVTTRGVQ*GLSYAP
Trigger: TGGAGCATAACTCAGCCCCAACTGGACTCCACGGGT...GGTAACTATCGCCTCTTGGTCTTCTGACATCATTGCCAGGAACGGGGCACTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR CAA 90 bp CTGCCTCACCAACCACTGGTGGCTGGTTGTGCTGGTTTTACTTGGCTCAAGGGCAACAACAACGAAAAGTaGGGAGGGAAAGGGAGTAGC +
Preference number: 5 (lower is better)
Translates to: LPHQPLVAGCAGFTWLKGNNNEK*GGKGSS
Trigger: GCTACTCCCTTTCCCTCCCAACTTTTCGTTGTTGTT...GCCCTTGAGCCAAGTAAAACCAGCACAACCAGCCACCAGTGGTTGGTGAGGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR CAA 90 bp GCACTGCCTCACCAACCACTGGTGGCTGGTTGTGCTGGTTTTACTTGGCTCAAGAACTCATCTCGAGGCTaGAAGTCTTCTAGGCACACT +
Preference number: 5 (lower is better)
Translates to: ALPHQPLVAGCAGFTWLKNSSRG*KSSRHT
Trigger: AGTGTGCCTAGAAGACTTCAAGCCTCGAGATGAGTT...CTTGAGCCAAGTAAAACCAGCACAACCAGCCACCAGTGGTTGGTGAGGCAGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
ENST00000545616.2
CDS-3UTR CAA 90 bp CGCAGGTGGGGGTGTGGCTTGAAAGACCTGCTCTTAGTTCCCTTCTTTACCCTCAACTCATCTCGAGGCTaGAAGTCTTCTAGGCACACT +
Preference number: 5 (lower is better)
Translates to: RRWGCGLKDLLLVPFFTLNSSRG*KSSRHT
Trigger: AGTGTGCCTAGAAGACTTCAAGCCTCGAGATGAGTT...GAGGGTAAAGAAGGGAACTAAGAGCAGGTCTTTCAAGCCACACCCCCACCTGCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
ENST00000545616.2
CDS-3UTR CAA 90 bp TCAGTTGTACCCCTAGCAACTACTAATGGTTCAGCCACCCGTGGAGTCCAGTTGACCACTGGTGGCTGGTaGTGCTGGTTTTACTTGGCT +
Preference number: 5 (lower is better)
Translates to: SVVPLATTNGSATRGVQLTTGGW*CWFYLA
Trigger: AGCCAAGTAAAACCAGCACAACCAGCCACCAGTGGT...CAACTGGACTCCACGGGTGGCTGAACCATTAGTAGTTGCTAGGGGTACAACTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR CAA 90 bp CTGCATGGCCTACAGAGAAACCCATCCATCCGCAGGTGGGGGTGTGGCTTGAAAGCCTGCAACTTTCAGTaGGGAGAATCCTATAAAAGC +
Preference number: 5 (lower is better)
Translates to: LHGLQRNPSIRRWGCGLKACNFQ*GESYKS
Trigger: GCTTTTATAGGATTCTCCCAACTGAAAGTTGCAGGC...TTTCAAGCCACACCCCCACCTGCGGATGGATGGGTTTCTCTGTAGGCCATGCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
CDS-3UTR CAA 90 bp GGGTGTGGCTTGAAAGACCTGCTCTTAGTTCCCTTCTTTACCCTCCTGCTTGACGAGTGCAGAGCATTCTaGTGCTCTCCTCTCATGGCT +
Preference number: 5 (lower is better)
Translates to: GCGLKDLLLVPFFTLLLDECRAF*CSPLMA
Trigger: AGCCATGAGAGGAGAGCACAAGAATGCTCTGCACTC...GTCAAGCAGGAGGGTAAAGAAGGGAACTAAGAGCAGGTCTTTCAAGCCACACCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
CDS-3UTR CAA 90 bp CTGCATGGCCTACAGAGAAACCCATCCATCCGCAGGTGGGGGTGTGGCTTGAAAAATATTCGGGTTGTGTaGCTAAGAGTCGCAGGAACT +
Preference number: 5 (lower is better)
Translates to: LHGLQRNPSIRRWGCGLKNIRVV*LRVAGT
Trigger: AGTTCCTGCGACTCTTAGCAACACAACCCGAATATT...TTTCAAGCCACACCCCCACCTGCGGATGGATGGGTTTCTCTGTAGGCCATGCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
CDS-3UTR CAA 90 bp AAGGTTTGCTGCGACAAAGGCCTGCATGGCCTACAGAGAAACCCATCCATCCGCGGGAAAAGGATCTTCTaGTCAAGAACAGGGTATCCG +
Preference number: 5 (lower is better)
Translates to: KVCCDKGLHGLQRNPSIRGKRIF*SRTGYP
Trigger: CGGATACCCTGTTCTTGACAAGAAGATCCTTTTCCC...GCGGATGGATGGGTTTCTCTGTAGGCCATGCAGGCCTTTGTCGCAGCAAACCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR CAA 90 bp CAGGTGGGGGTGTGGCTTGAAAGACCTGCTCTTAGTTCCCTTCTTTACCCTCCTCTACAGAGCCTGATCTaGAGCATCCTGTCGCAGATA +
Preference number: 5 (lower is better)
Translates to: QVGVWLERPALSSLLYPPLQSLI*SILSQI
Trigger: TATCTGCGACAGGATGCTCAAGATCAGGCTCTGTAG...AGGAGGGTAAAGAAGGGAACTAAGAGCAGGTCTTTCAAGCCACACCCCCACCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR CAA 90 bp ACCAGCTGTCACCAGAAGGGAGTTCCTAACACTTGCCACACCTGCTCCCCCGACGCATCTTGTAACAATTaGGGCTCTACAGCTGAATTG +
Preference number: 5 (lower is better)
Translates to: TSCHQKGVPNTCHTCSPDASCNN*GSTAEL
Trigger: CAATTCAGCTGTAGAGCCCAAATTGTTACAAGATGC...GTCGGGGGAGCAGGTGTGGCAAGTGTTAGGAACTCCCTTCTGGTGACAGCTGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR CAA 90 bp GGGCCAAACTACAAGACGAAAAAGTGCCCCGTTCCTGGCAATGATGTCAGAAGAGAGTGCAGAGCATTCTaGTGCTCTCCTCTCATGGCT +
Preference number: 5 (lower is better)
Translates to: GPNYKTKKCPVPGNDVRRECRAF*CSPLMA
Trigger: AGCCATGAGAGGAGAGCACAAGAATGCTCTGCACTC...TCTTCTGACATCATTGCCAGGAACGGGGCACTTTTTCGTCTTGTAGTTTGGCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR CAA 90 bp ACCCTCATGAAGTTTCTTGAGGCAAACCCGCAGGCTCATCCACTCCTCTTCTCTCATGTGCTGAGAAGGTaGTTAGTGGTCCCTCATCTG +
Preference number: 5 (lower is better)
Translates to: TLMKFLEANPQAHPLLFSHVLRR*LVVPHL
Trigger: CAGATGAGGGACCACTAACAACCTTCTCAGCACATG...AGAGAAGAGGAGTGGATGAGCCTGCGGGTTTGCCTCAAGAAACTTCATGAGGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
CDS-3UTR CAA 90 bp AAGGTTTGCTGCGACAAAGGCCTGCATGGCCTACAGAGAAACCCATCCATCCGCAATATTCGGGTTGTGTaGCTAAGAGTCGCAGGAACT +
Preference number: 5 (lower is better)
Translates to: KVCCDKGLHGLQRNPSIRNIRVV*LRVAGT
Trigger: AGTTCCTGCGACTCTTAGCAACACAACCCGAATATT...GCGGATGGATGGGTTTCTCTGTAGGCCATGCAGGCCTTTGTCGCAGCAAACCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
CDS-3UTR CAA 90 bp CGCAGGTGGGGGTGTGGCTTGAAAGACCTGCTCTTAGTTCCCTTCTTTACCCTCAATATTCGGGTTGTGTaGCTAAGAGTCGCAGGAACT +
Preference number: 5 (lower is better)
Translates to: RRWGCGLKDLLLVPFFTLNIRVV*LRVAGT
Trigger: AGTTCCTGCGACTCTTAGCAACACAACCCGAATATT...GAGGGTAAAGAAGGGAACTAAGAGCAGGTCTTTCAAGCCACACCCCCACCTGCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
CDS-3UTR CAA 90 bp TTCTCAAAAAGCCACTGCTCTTTGGAGCCACTCGAGAGGTTCACAGTGGCTCCCGGGAAAAGGATCTTCTaGTCAAGAACAGGGTATCCG +
Preference number: 5 (lower is better)
Translates to: FSKSHCSLEPLERFTVAPGKRIF*SRTGYP
Trigger: CGGATACCCTGTTCTTGACAAGAAGATCCTTTTCCC...GGGAGCCACTGTGAACCTCTCGAGTGGCTCCAAAGAGCAGTGGCTTTTTGAGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR CAA 90 bp AATACTGAGGCACACACCAACGGTGGACAGCCCTGCAGGAGCTTCCTGAAACTAAGCTCAGGAAGCTTTTaGGCTGAGGTTCTGTTCCTA +
Preference number: 5 (lower is better)
Translates to: NTEAHTNGGQPCRSFLKLSSGSF*AEVLFL
Trigger: TAGGAACAGAACCTCAGCCAAAAAGCTTCCTGAGCT...TAGTTTCAGGAAGCTCCTGCAGGGCTGTCCACCGTTGGTGTGTGCCTCAGTATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR CAA 90 bp GCTGAGAAGGTTGTTAGTGGTCCCTCATCTGGGCAAAGCAGACCCAAGGTGGTGGGGCAACATAGTGAGTaGAGACCTGTCTCTACAAAA +
Preference number: 5 (lower is better)
Translates to: AEKVVSGPSSGQSRPKVVGQHSE*RPVSTK
Trigger: TTTTGTAGAGACAGGTCTCAACTCACTATGTTGCCC...CACCACCTTGGGTCTGCTTTGCCCAGATGAGGGACCACTAACAACCTTCTCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR CAA 90 bp ATGGAAATTTTCCTCCTCATGCCCAGCCATCTGAACCAAGGACAGGTTCCTTCTACCACTGGTGGCTGGTaGTGCTGGTTTTACTTGGCT +
Preference number: 5 (lower is better)
Translates to: MEIFLLMPSHLNQGQVPSTTGGW*CWFYLA
Trigger: AGCCAAGTAAAACCAGCACAACCAGCCACCAGTGGT...AGAAGGAACCTGTCCTTGGTTCAGATGGCTGGGCATGAGGAGGAAAATTTCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
CDS-3UTR CAA 90 bp AAACCCATCCATCCGCAGGTGGGGGTGTGGCTTGAAAGACCTGCTCTTAGTTCCTATAAACGGGGTGTTTaGTGGCATTCAACTCTGTTG +
Preference number: 5 (lower is better)
Translates to: KPIHPQVGVWLERPALSSYKRGV*WHSTLL
Trigger: CAACAGAGTTGAATGCCACAAAACACCCCGTTTATA...GGAACTAAGAGCAGGTCTTTCAAGCCACACCCCCACCTGCGGATGGATGGGTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
CDS-3UTR CAA 90 bp CATCCGCAGGTGGGGGTGTGGCTTGAAAGACCTGCTCTTAGTTCCCTTCTTTACAGCCTCCTTCTGATATaGGTCACTGAAAACAGCTCA +
Preference number: 5 (lower is better)
Translates to: HPQVGVWLERPALSSLLYSLLLI*VTENSS
Trigger: TGAGCTGTTTTCAGTGACCAATATCAGAAGGAGGCT...GTAAAGAAGGGAACTAAGAGCAGGTCTTTCAAGCCACACCCCCACCTGCGGATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
CDS-3UTR CAA 90 bp TGTCACAAGACCCAGACACCTAGGTTCCCAGTTTGGCTGGCCCAAGAGTTCTTCGCCTGCAACTTTCAGTaGGGAGAATCCTATAAAAGC +
Preference number: 5 (lower is better)
Translates to: CHKTQTPRFPVWLAQEFFACNFQ*GESYKS
Trigger: GCTTTTATAGGATTCTCCCAACTGAAAGTTGCAGGC...GAAGAACTCTTGGGCCAGCCAAACTGGGAACCTAGGTGTCTGGGTCTTGTGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
CDS-3UTR CAA 90 bp AGGAACACTGCTACTCAAAGCCAAGATGGCCTTATCAAAGGCATACAACATGAGGGAACTATCTGGGCTTaGCGCCCTGGTCCAGTGCTA +
Preference number: 5 (lower is better)
Translates to: RNTATQSQDGLIKGIQHEGTIWA*RPGPVL
Trigger: TAGCACTGGACCAGGGCGCAAAGCCCAGATAGTTCC...CTCATGTTGTATGCCTTTGATAAGGCCATCTTGGCTTTGAGTAGCAGTGTTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
CDS-3UTR CAA 90 bp GGGTGTGGCTTGAAAGACCTGCTCTTAGTTCCCTTCTTTACCCTCCTGCTTGACAGCTCAGGAAGCTTTTaGGCTGAGGTTCTGTTCCTA +
Preference number: 5 (lower is better)
Translates to: GCGLKDLLLVPFFTLLLDSSGSF*AEVLFL
Trigger: TAGGAACAGAACCTCAGCCAAAAAGCTTCCTGAGCT...GTCAAGCAGGAGGGTAAAGAAGGGAACTAAGAGCAGGTCTTTCAAGCCACACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR CAA 90 bp ACTGGTGGCTGGTTGTGCTGGTTTTACTTGGCTCAAGGGCTGCTGGGAAGGTTTGGGCAACATAGTGAGTaGAGACCTGTCTCTACAAAA +
Preference number: 5 (lower is better)
Translates to: TGGWLCWFYLAQGLLGRFGQHSE*RPVSTK
Trigger: TTTTGTAGAGACAGGTCTCAACTCACTATGTTGCCC...AAACCTTCCCAGCAGCCCTTGAGCCAAGTAAAACCAGCACAACCAGCCACCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR CAA 90 bp TTCTTTACCCTCCTGCTTGACATGGAGATGAGGCTCCAGGAGAGAGAGTGTAATAGTGCAGTGGGGATCTaGGCTCACTGCAACTTCTGT +
Preference number: 5 (lower is better)
Translates to: FFTLLLDMEMRLQERECNSAVGI*AHCNFC
Trigger: ACAGAAGTTGCAGTGAGCCAAGATCCCCACTGCACT...ATTACACTCTCTCTCCTGGAGCCTCATCTCCATGTCAAGCAGGAGGGTAAAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR CAA 90 bp AAGGCATACAACATGAGCCTTGTGGGCACTGCCTCACCAACCACTGGTGGCTGGAGGAAATGGCCTATTTaGACCAACTGGATTTGTAAT +
Preference number: 5 (lower is better)
Translates to: KAYNMSLVGTASPTTGGWRKWPI*TNWICN
Trigger: ATTACAAATCCAGTTGGTCAAAATAGGCCATTTCCT...CCAGCCACCAGTGGTTGGTGAGGCAGTGCCCACAAGGCTCATGTTGTATGCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
CDS-3UTR CAA 90 bp ACCCTCATGAAGTTTCTTGAGGCAAACCCGCAGGCTCATCCACTCCTCTTCTCTAGCCTCCTTCTGATATaGGTCACTGAAAACAGCTCA +
Preference number: 5 (lower is better)
Translates to: TLMKFLEANPQAHPLLFSSLLLI*VTENSS
Trigger: TGAGCTGTTTTCAGTGACCAATATCAGAAGGAGGCT...AGAGAAGAGGAGTGGATGAGCCTGCGGGTTTGCCTCAAGAAACTTCATGAGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
CDS-3UTR CAA 90 bp CTGCATGGCCTACAGAGAAACCCATCCATCCGCAGGTGGGGGTGTGGCTTGAAATTCAAATATACAGACTaGGTGAGGCTGTCTTTTGTT +
Preference number: 5 (lower is better)
Translates to: LHGLQRNPSIRRWGCGLKFKYTD*VRLSFV
Trigger: AACAAAAGACAGCCTCACCAAGTCTGTATATTTGAA...TTTCAAGCCACACCCCCACCTGCGGATGGATGGGTTTCTCTGTAGGCCATGCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
CDS-3UTR CAA 90 bp AGAAACCCATCCATCCGCAGGTGGGGGTGTGGCTTGAAAGACCTGCTCTTAGTTATCAGAAAAATCTGGTaGTGCTCTTGGATTAGCTGG +
Preference number: 5 (lower is better)
Translates to: RNPSIRRWGCGLKDLLLVIRKIW*CSWISW
Trigger: CCAGCTAATCCAAGAGCACAACCAGATTTTTCTGAT...AACTAAGAGCAGGTCTTTCAAGCCACACCCCCACCTGCGGATGGATGGGTTTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR CAA 90 bp ACACTAATGGAAATTTTCCTCCTCATGCCCAGCCATCTGAACCAAGGACAGGTTAGTGCAGTGGGGATCTaGGCTCACTGCAACTTCTGT +
Preference number: 5 (lower is better)
Translates to: TLMEIFLLMPSHLNQGQVSAVGI*AHCNFC
Trigger: ACAGAAGTTGCAGTGAGCCAAGATCCCCACTGCACT...AACCTGTCCTTGGTTCAGATGGCTGGGCATGAGGAGGAAAATTTCCATTAGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR CAA 90 bp ATCAAAGGCATACAACATGAGCCTTGTGGGCACTGCCTCACCAACCACTGGTGGGCATCTTGTAACAATTaGGGCTCTACAGCTGAATTG +
Preference number: 5 (lower is better)
Translates to: IKGIQHEPCGHCLTNHWWASCNN*GSTAEL
Trigger: CAATTCAGCTGTAGAGCCCAAATTGTTACAAGATGC...CCACCAGTGGTTGGTGAGGCAGTGCCCACAAGGCTCATGTTGTATGCCTTTGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR CAA 90 bp AGCCAAGATGGCCTTATCAAAGGCATACAACATGAGCCTTGTGGGCACTGCCTCTATAAACGGGGTGTTTaGTGGCATTCAACTCTGTTG +
Preference number: 5 (lower is better)
Translates to: SQDGLIKGIQHEPCGHCLYKRGV*WHSTLL
Trigger: CAACAGAGTTGAATGCCACAAAACACCCCGTTTATA...GAGGCAGTGCCCACAAGGCTCATGTTGTATGCCTTTGATAAGGCCATCTTGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
CDS-3UTR CAA 90 bp ACCCTCATGAAGTTTCTTGAGGCAAACCCGCAGGCTCATCCACTCCTCTTCTCTTATAAACGGGGTGTTTaGTGGCATTCAACTCTGTTG +
Preference number: 5 (lower is better)
Translates to: TLMKFLEANPQAHPLLFSYKRGV*WHSTLL
Trigger: CAACAGAGTTGAATGCCACAAAACACCCCGTTTATA...AGAGAAGAGGAGTGGATGAGCCTGCGGGTTTGCCTCAAGAAACTTCATGAGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
CDS-3UTR CAA 90 bp GCACTGCCTCACCAACCACTGGTGGCTGGTTGTGCTGGTTTTACTTGGCTCAAGTTCAAATATACAGACTaGGTGAGGCTGTCTTTTGTT +
Preference number: 5 (lower is better)
Translates to: ALPHQPLVAGCAGFTWLKFKYTD*VRLSFV
Trigger: AACAAAAGACAGCCTCACCAAGTCTGTATATTTGAA...CTTGAGCCAAGTAAAACCAGCACAACCAGCCACCAGTGGTTGGTGAGGCAGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
CDS-3UTR CAA 90 bp ATGGAAATTTTCCTCCTCATGCCCAGCCATCTGAACCAAGGACAGGTTCCTTCTAACAACAACGAAAAGTaGGGAGGGAAAGGGAGTAGC +
Preference number: 5 (lower is better)
Translates to: MEIFLLMPSHLNQGQVPSNNNEK*GGKGSS
Trigger: GCTACTCCCTTTCCCTCCCAACTTTTCGTTGTTGTT...AGAAGGAACCTGTCCTTGGTTCAGATGGCTGGGCATGAGGAGGAAAATTTCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR CAA 90 bp GTAGAGAGCAGCCATACAGACACCACATGTGTTCCTCCTGGCTCCACACAGACGAAGTGGAGTACATCTTaGCATCTTGTAACAATTTGG +
Preference number: 5 (lower is better)
Translates to: VESSHTDTTCVPPGSTQTKWSTS*HLVTIW
Trigger: CCAAATTGTTACAAGATGCAAAGATGTACTCCACTT...CGTCTGTGTGGAGCCAGGAGGAACACATGTGGTGTCTGTATGGCTGCTCTCTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR CAA 90 bp CATCCACTCCTCTTCTCTCGGCAGGGGGTAGTGTCAAAGTGCTTTGGTTGTCACTTCAGCTTAGATGATTaGATAGCAGGTGTTGTAATC +
Preference number: 5 (lower is better)
Translates to: HPLLFSRQGVVSKCFGCHFSLDD*IAGVVI
Trigger: GATTACAACACCTGCTATCAAATCATCTAAGCTGAA...GTGACAACCAAAGCACTTTGACACTACCCCCTGCCGAGAGAAGAGGAGTGGATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
CDS-3UTR CAA 90 bp AATACTGAGGCACACACCAACGGTGGACAGCCCTGCAGGAGCTTCCTGAAACTATCATTTCTAGAAAAGTaGGACAGAAAGAGCCAAAGA +
Preference number: 5 (lower is better)
Translates to: NTEAHTNGGQPCRSFLKLSFLEK*DRKSQR
Trigger: TCTTTGGCTCTTTCTGTCCAACTTTTCTAGAAATGA...TAGTTTCAGGAAGCTCCTGCAGGGCTGTCCACCGTTGGTGTGTGCCTCAGTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
CDS-3UTR CAA 90 bp TTCTTTACCCTCCTGCTTGACATGGAGATGAGGCTCCAGGAGAGAGAGTGTAATGCCTGCAACTTTCAGTaGGGAGAATCCTATAAAAGC +
Preference number: 5 (lower is better)
Translates to: FFTLLLDMEMRLQERECNACNFQ*GESYKS
Trigger: GCTTTTATAGGATTCTCCCAACTGAAAGTTGCAGGC...ATTACACTCTCTCTCCTGGAGCCTCATCTCCATGTCAAGCAGGAGGGTAAAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
CDS-3UTR CAA 90 bp CCTCTTCTCTCGGCAGGGGGTAGTGTCAAAGTGCTTTGGTTGTCACAAGACCCAAAGTGGAGTACATCTTaGCATCTTGTAACAATTTGG +
Preference number: 5 (lower is better)
Translates to: PLLSAGGSVKVLWLSQDPKWSTS*HLVTIW
Trigger: CCAAATTGTTACAAGATGCAAAGATGTACTCCACTT...TGGGTCTTGTGACAACCAAAGCACTTTGACACTACCCCCTGCCGAGAGAAGAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR CAA 90 bp TGGGGGTGTGGCTTGAAAGACCTGCTCTTAGTTCCCTTCTTTACCCTCCTGCTTTTCAGCTTAGATGATTaGATAGCAGGTGTTGTAATC +
Preference number: 5 (lower is better)
Translates to: WGCGLKDLLLVPFFTLLLFSLDD*IAGVVI
Trigger: GATTACAACACCTGCTATCAAATCATCTAAGCTGAA...AAGCAGGAGGGTAAAGAAGGGAACTAAGAGCAGGTCTTTCAAGCCACACCCCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
CDS-3UTR CAA 90 bp TGGGGGTGTGGCTTGAAAGACCTGCTCTTAGTTCCCTTCTTTACCCTCCTGCTTTCATTTCTAGAAAAGTaGGACAGAAAGAGCCAAAGA +
Preference number: 5 (lower is better)
Translates to: WGCGLKDLLLVPFFTLLLSFLEK*DRKSQR
Trigger: TCTTTGGCTCTTTCTGTCCAACTTTTCTAGAAATGA...AAGCAGGAGGGTAAAGAAGGGAACTAAGAGCAGGTCTTTCAAGCCACACCCCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
CDS-3UTR CAA 90 bp CGTTTCTCTCCTATAAAGACACTTTCACTTTCAGTTTCGGAAGTCCAAATACTGTTGTGCTGGTTTTACTaGGCTCAAGGGCTGCTGGGA +
Preference number: 5 (lower is better)
Translates to: RFSPIKTLSLSVSEVQILLCWFY*AQGLLG
Trigger: TCCCAGCAGCCCTTGAGCCAAGTAAAACCAGCACAA...CAGTATTTGGACTTCCGAAACTGAAAGTGAAAGTGTCTTTATAGGAGAGAAACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
CDS-3UTR CAA 90 bp AAAAGTGCCCCGTTCCTGGCAATGATGTCAGAAGACCAAGAGGCGATAGTTACCAGGAAATGGCCTATTTaGACCAACTGGATTTGTAAT +
Preference number: 5 (lower is better)
Translates to: KSAPFLAMMSEDQEAIVTRKWPI*TNWICN
Trigger: ATTACAAATCCAGTTGGTCAAAATAGGCCATTTCCT...GGTAACTATCGCCTCTTGGTCTTCTGACATCATTGCCAGGAACGGGGCACTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR CAA 90 bp ACACCTAGGTTCCCAGTTTGGCTGGCCCAAGAGTTCTTCATGAGGCAAAAGAAGAGGAAATGGCCTATTTaGACCAACTGGATTTGTAAT +
Preference number: 5 (lower is better)
Translates to: TPRFPVWLAQEFFMRQKKRKWPI*TNWICN
Trigger: ATTACAAATCCAGTTGGTCAAAATAGGCCATTTCCT...CTTCTTTTGCCTCATGAAGAACTCTTGGGCCAGCCAAACTGGGAACCTAGGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
CDS-3UTR CAA 90 bp AGGAACACTGCTACTCAAAGCCAAGATGGCCTTATCAAAGGCATACAACATGAGAGCCTCCTTCTGATATaGGTCACTGAAAACAGCTCA +
Preference number: 5 (lower is better)
Translates to: RNTATQSQDGLIKGIQHESLLLI*VTENSS
Trigger: TGAGCTGTTTTCAGTGACCAATATCAGAAGGAGGCT...CTCATGTTGTATGCCTTTGATAAGGCCATCTTGGCTTTGAGTAGCAGTGTTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
CDS-3UTR CAA 90 bp ATGATCTCTGGAAGGATACCCAAGGAACAAACCAATAGTAGGTATTCATGGAGTTGTAGAACTGGCATGTaGCACAGGGGACACACTTTA +
Preference number: 5 (lower is better)
Translates to: MISGRIPKEQTNSRYSWSCRTGM*HRGHTL
Trigger: TAAAGTGTGTCCCCTGTGCAACATGCCAGTTCTACA...ACTCCATGAATACCTACTATTGGTTTGTTCCTTGGGTATCCTTCCAGAGATCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR CAA 90 bp ATGGAAATTTTCCTCCTCATGCCCAGCCATCTGAACCAAGGACAGGTTCCTTCTTTCAAATATACAGACTaGGTGAGGCTGTCTTTTGTT +
Preference number: 5 (lower is better)
Translates to: MEIFLLMPSHLNQGQVPSFKYTD*VRLSFV
Trigger: AACAAAAGACAGCCTCACCAAGTCTGTATATTTGAA...AGAAGGAACCTGTCCTTGGTTCAGATGGCTGGGCATGAGGAGGAAAATTTCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
CDS-3UTR CAA 90 bp AGGAACACTGCTACTCAAAGCCAAGATGGCCTTATCAAAGGCATACAACATGAGATCAGAAAAATCTGGTaGTGCTCTTGGATTAGCTGG +
Preference number: 5 (lower is better)
Translates to: RNTATQSQDGLIKGIQHEIRKIW*CSWISW
Trigger: CCAGCTAATCCAAGAGCACAACCAGATTTTTCTGAT...CTCATGTTGTATGCCTTTGATAAGGCCATCTTGGCTTTGAGTAGCAGTGTTCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336095.10
ENST00000358395.11
CDS-3UTR CAA 90 bp AGGAACACTGCTACTCAAAGCCAAGATGGCCTTATCAAAGGCATACAACATGAGTTCAGCTTAGATGATTaGATAGCAGGTGTTGTAATC +
Preference number: 5 (lower is better)
Translates to: RNTATQSQDGLIKGIQHEFSLDD*IAGVVI
Trigger: GATTACAACACCTGCTATCAAATCATCTAAGCTGAA...CTCATGTTGTATGCCTTTGATAAGGCCATCTTGGCTTTGAGTAGCAGTGTTCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
CDS-3UTR CAA 90 bp CGTTTCTCTCCTATAAAGACACTTTCACTTTCAGTTTCGGAAGTCCAAATACTGTCATTTCTAGAAAAGTaGGACAGAAAGAGCCAAAGA +
Preference number: 5 (lower is better)
Translates to: RFSPIKTLSLSVSEVQILSFLEK*DRKSQR
Trigger: TCTTTGGCTCTTTCTGTCCAACTTTTCTAGAAATGA...CAGTATTTGGACTTCCGAAACTGAAAGTGAAAGTGTCTTTATAGGAGAGAAACG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
CDS CCA 72 bp GCCGAGGCGCCGGGAGAGTGTGTGTGTGTGGGAGGCTaGCGCGGGCCCGCGGTCTCCTCAGCATCCCGAACC +
Preference number: 6 (lower is better)
Translates to: AEAPGECVCVGG*RGPAVSSASRT
Trigger: GGTTCGGGATGCTGAGGAGACCGCGGGCCCGCGCCAGCCTCCCACACACACACACTCTCCCGGCGCCTCGGC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336095.10
CDS CCA 72 bp GGAAATCCGAGCTCATGGATGAATCGGGCGCGCCGGTaGCAGCGGCAGACGTGCGGGACCGTCAGCGCCCTG +
Preference number: 6 (lower is better)
Translates to: GNPSSWMNRARR*QRQTCGTVSAL
Trigger: CAGGGCGCTGACGGTCCCGCACGTCTGCCGCTGCCACCGGCGCGCCCGATTCATCCATGAGCTCGGATTTCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358395.11
CDS TCA 72 bp GAGCTCATGGATGAACTTCCCTCCGTGATCTCCAGGTaGCAGCCCCGCTCCGCCCTTTGTGAGGGACTCACC +
Preference number: 6 (lower is better)
Translates to: ELMDELPSVISR*QPRSALCEGLT
Trigger: GGTGAGTCCCTCACAAAGGGCGGAGCGGGGCTGTCACCTGGAGATCACGGAGGGAAGTTCATCCATGAGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336095.10
CDS GCA 72 bp TACTGTGCAACTGGGCCAGCTGTAGAACTGGCATGTTaGACAGGGGACACACTTTACGAACCTCCAGCCACT +
Preference number: 6 (lower is better)
Translates to: YCATGPAVELAC*TGDTLYEPPAT
Trigger: AGTGGCTGGAGGTTCGTAAAGTGTGTCCCCTGTGCAACATGCCAGTTCTACAGCTGGCCCAGTTGCACAGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
ENST00000545616.2
CDS CAA 72 bp TTACTGTGCAACTGGGCCAGCTGTAGAACTGGCATGTaGCACAGGGGACACACTTTACGAACCTCCAGCCAC +
Preference number: 6 (lower is better)
Translates to: LLCNWASCRTGM*HRGHTLRTSSH
Trigger: GTGGCTGGAGGTTCGTAAAGTGTGTCCCCTGTGCAACATGCCAGTTCTACAGCTGGCCCAGTTGCACAGTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
ENST00000545616.2
CDS GCA 72 bp CCACACAGACGTCGTGTCCAGCAACAGTCTGATCCTTaGGGTAAGCTATACAATGTTCTCTGCCCCAGGAAG +
Preference number: 6 (lower is better)
Translates to: PHRRRVQQQSDP*GKLYNVLCPRK
Trigger: CTTCCTGGGGCAGAGAACATTGTATAGCTTACCGCAAGGATCAGACTGTTGCTGGACACGACGTCTGTGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
ENST00000545616.2
CDS GCA 72 bp TCCAGCCACTTAATAAGGCACTTTCTGTGGAAGGCGTaGTTACATGGGCAAATCCCCAACTCATCTCGAGGC +
Preference number: 6 (lower is better)
Translates to: SSHLIRHFLWKA*LHGQIPNSSRG
Trigger: GCCTCGAGATGAGTTGGGGATTTGCCCATGTAAGCACGCCTTCCACAGAAAGTGCCTTATTAAGTGGCTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
ENST00000545616.2
CDS CCA 72 bp CTTAATAAGGCACTTTCTGTGGAAGGCGTGCTTACATaGGCAAATCCCCAACTCATCTCGAGGCTTGAAGTC +
Preference number: 6 (lower is better)
Translates to: LNKALSVEGVLT*ANPQLISRLEV
Trigger: GACTTCAAGCCTCGAGATGAGTTGGGGATTTGCCCATGTAAGCACGCCTTCCACAGAAAGTGCCTTATTAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336095.10
ENST00000358395.11
ENST00000432261.6
ENST00000545616.2