RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RNF217 (Homo sapiens)

Ensembl gene IDs: ENSG00000146373

Ensembl transcript IDs: ENST00000359704.2, ENST00000368414.6, ENST00000368415.2, ENST00000431104.2, ENST00000432158.6, ENST00000454842.2, ENST00000519565.5, ENST00000519799.5, ENST00000519971.1, ENST00000521654.6, ENST00000521654.7, ENST00000560949.5

Found 506 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp AGAACAAAGATCTTAGTCTCAGTACAGGGTGCCATACTGTGGCCATaGATCTCACGATTGGTTGGCTGGGGTATCCATGTCAGTGCTCTC +
Preference number: 1 (lower is better)
Translates to: RTKILVSVQGAILWP*ISRLVGWGIHVSAL
Trigger: GAGAGCACTGACATGGATACCCCAGCCAACCAATCGTGAGATTCATGGCCACAGTATGGCACCCTGTACTGAGACTAAGATCTTTGTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432158.6
3UTR GCA 90 bp CTTCAGCTATTAACACCAAGTCTCACAAGATGGCCTGGAAGGAGGTaGAGAGTTCAAAGACAGTCCAAGCAATTCTCAGAAGAGGCGTGC +
Preference number: 1 (lower is better)
Translates to: LQLLTPSLTRWPGRR*RVQRQSKQFSEEAC
Trigger: GCACGCCTCTTCTGAGAATTGCTTGGACTGTCTTTGAACTCTGCACCTCCTTCCAGGCCATCTTGTGAGACTTGGTGTTAATAGCTGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359704.2
ENST00000368414.6
ENST00000519565.5
ENST00000521654.6
ENST00000560949.5
3UTR CCA 90 bp GATGGGTGTACCCTTTGGTATCGCTCCTACTCCAACCAGCTTAGCTaGATGAAATCATCTGCATGTTACCAGTGCATACCTGTCCGTGAT +
Preference number: 1 (lower is better)
Translates to: DGCTLWYRSYSNQLS*MKSSACYQCIPVRD
Trigger: ATCACGGACAGGTATGCACTGGTAACATGCAGATGATTTCATCCAGCTAAGCTGGTTGGAGTAGGAGCGATACCAAAGGGTACACCCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359704.2
ENST00000519565.5
ENST00000560949.5
3UTR GCA 90 bp GATCTGTTCATCACAAAGAACAAAGATCTTAGTCTCAGTACAGGGTaGCATACTGTGGCCATGAATCTCACGATTGGTTGGCTGGGGTAT +
Preference number: 1 (lower is better)
Translates to: DLFITKNKDLSLSTG*HTVAMNLTIGWLGY
Trigger: ATACCCCAGCCAACCAATCGTGAGATTCATGGCCACAGTATGGCACCCTGTACTGAGACTAAGATCTTTGTTCTTTGTGATGAACAGATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432158.6
3UTR CCA 90 bp ACAGATAGGACTTCAGCTATTAACACCAAGTCTCACAAGATGGCCTaGAAGGAGGTGCAGAGTTCAAAGACAGTCCAAGCAATTCTCAGA +
Preference number: 1 (lower is better)
Translates to: TDRTSAINTKSHKMA*KEVQSSKTVQAILR
Trigger: TCTGAGAATTGCTTGGACTGTCTTTGAACTCTGCACCTCCTTCCAGGCCATCTTGTGAGACTTGGTGTTAATAGCTGAAGTCCTATCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359704.2
ENST00000368414.6
ENST00000519565.5
ENST00000521654.6
ENST00000560949.5
3UTR CCA 90 bp TTGGTACAGATAGGACTTCAGCTATTAACACCAAGTCTCACAAGATaGCCTGGAAGGAGGTGCAGAGTTCAAAGACAGTCCAAGCAATTC +
Preference number: 1 (lower is better)
Translates to: LVQIGLQLLTPSLTR*PGRRCRVQRQSKQF
Trigger: GAATTGCTTGGACTGTCTTTGAACTCTGCACCTCCTTCCAGGCCATCTTGTGAGACTTGGTGTTAATAGCTGAAGTCCTATCTGTACCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359704.2
ENST00000368414.6
ENST00000519565.5
ENST00000521654.6
ENST00000560949.5
3UTR TCA 90 bp GCTAAATTCTGGAGTGCGTTCAGTGTTGAATTCATTTCATTACAGTaGAAGGAGTTACGGGCGAGACAGAATTTATCCCACACTTGGCCA +
Preference number: 1 (lower is better)
Translates to: AKFWSAFSVEFISLQ*KELRARQNLSHTWP
Trigger: TGGCCAAGTGTGGGATAAATTCTGTCTCGCCCGTAACTCCTTTCACTGTAATGAAATGAATTCAACACTGAACGCACTCCAGAATTTAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519565.5
ENST00000521654.6
3UTR TCA 90 bp CTTGGGACTCAAGAGATAGTCAGAGTCACAGAACAAGGTATTTTCTaGCAAGCACCACTGAATCTTGATACCACAGCAGAGAAAGTACAA +
Preference number: 1 (lower is better)
Translates to: LGTQEIVRVTEQGIF*QAPLNLDTTAEKVQ
Trigger: TTGTACTTTCTCTGCTGTGGTATCAAGATTCAGTGGTGCTTGTCAGAAAATACCTTGTTCTGTGACTCTGACTATCTCTTGAGTCCCAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519565.5
ENST00000521654.6
3UTR GCA 90 bp ATAATAGGTGCATTCAGTGAACTCTTATCTTCTGAAAAGTGGCCTTaGTTGTTGGTACAGATAGGACTTCAGCTATTAACACCAAGTCTC +
Preference number: 1 (lower is better)
Translates to: IIGAFSELLSSEKWP*LLVQIGLQLLTPSL
Trigger: GAGACTTGGTGTTAATAGCTGAAGTCCTATCTGTACCAACAAGCAAGGCCACTTTTCAGAAGATAAGAGTTCACTGAATGCACCTATTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359704.2
ENST00000368414.6
ENST00000519565.5
ENST00000521654.6
ENST00000560949.5
3UTR TCA 90 bp TGGTGCTGGAATCAATACGGCCAAGTTCCAAGAAGTACTTATACTTaGTGGAGTCTTCATGCGTTAAGTTATAGACAACAGTTGTTTCTT +
Preference number: 1 (lower is better)
Translates to: WCWNQYGQVPRSTYT*WSLHALSYRQQLFL
Trigger: AAGAAACAACTGTTGTCTATAACTTAACGCATGAAGACTCCATCAAGTATAAGTACTTCTTGGAACTTGGCCGTATTGATTCCAGCACCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519565.5
3UTR CCA 90 bp CAGATTATAATAGGTGCATTCAGTGAACTCTTATCTTCTGAAAAGTaGCCTTGCTTGTTGGTACAGATAGGACTTCAGCTATTAACACCA +
Preference number: 1 (lower is better)
Translates to: QIIIGAFSELLSSEK*PCLLVQIGLQLLTP
Trigger: TGGTGTTAATAGCTGAAGTCCTATCTGTACCAACAAGCAAGGCCACTTTTCAGAAGATAAGAGTTCACTGAATGCACCTATTATAATCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359704.2
ENST00000368414.6
ENST00000519565.5
ENST00000521654.6
ENST00000560949.5
3UTR GCA 90 bp CCTGATACATTTCCATTTACAAATAAAATAAGCCAAGGTAAATTATaGTCACTACCAGAGCTAAATTCTGGAGTGCGTTCAGTGTTGAAT +
Preference number: 1 (lower is better)
Translates to: PDTFPFTNKISQGKL*SLPELNSGVRSVLN
Trigger: ATTCAACACTGAACGCACTCCAGAATTTAGCTCTGGTAGTGAGCATAATTTACCTTGGCTTATTTTATTTGTAAATGGAAATGTATCAGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519565.5
ENST00000521654.6
3UTR-3UTR TCA 90 bp GTTACGGGCGAGACAGAATTTATCCCACACTTGGCCAAGATGGGAAGAAGACTGGGAGGGAGGATCGCTTaGGCCCAAGAGTTTGAGACC +
Preference number: 2 (lower is better)
Translates to: VTGETEFIPHLAKMGRRLGGRIA*AQEFET
Trigger: GGTCTCAAACTCTTGGGCTCAAGCGATCCTCCCTCC...CAGTCTTCTTCCCATCTTGGCCAAGTGTGGGATAAATTCTGTCTCGCCCGTAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519565.5
ENST00000521654.6
3UTR-3UTR GCA 90 bp GTTACGGGCGAGACAGAATTTATCCCACACTTGGCCAAGATGGGAAGAAGACTGGCATTCCTCTGCCCATaGTCAATTTCGCTGGCCCAG +
Preference number: 2 (lower is better)
Translates to: VTGETEFIPHLAKMGRRLAFLCP*SISLAQ
Trigger: CTGGGCCAGCGAAATTGAGCATGGGCAGAGGAATGC...CAGTCTTCTTCCCATCTTGGCCAAGTGTGGGATAAATTCTGTCTCGCCCGTAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519565.5
3UTR-3UTR TCA 90 bp TCTTGGCAGAGGGCTAGGCAGTGTTCTCCAACTCCTATCAAGAGGGAAAAGTGTGTAAAGTGCTTGCACTaGGGACATGGCTTGGTGCTG +
Preference number: 2 (lower is better)
Translates to: SWQRARQCSPTPIKREKCVKCLH*GHGLVL
Trigger: CAGCACCAAGCCATGTCCTCAGTGCAAGCACTTTAC...ACACTTTTCCCTCTTGATAGGAGTTGGAGAACACTGCCTAGCCCTCTGCCAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519565.5
3UTR-3UTR CCA 90 bp CACCAAGTCTCACAAGATGGCCTGGAAGGAGGTGCAGAGTTCAAAGACAGTCCAGATGGGTGTACCCTTTaGTATCGCTCCTACTCCAAC +
Preference number: 2 (lower is better)
Translates to: HQVSQDGLEGGAEFKDSPDGCTL*YRSYSN
Trigger: GTTGGAGTAGGAGCGATACCAAAGGGTACACCCATC...TGGACTGTCTTTGAACTCTGCACCTCCTTCCAGGCCATCTTGTGAGACTTGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359704.2
ENST00000368414.6
ENST00000519565.5
ENST00000521654.6
ENST00000560949.5
3UTR-3UTR TCA 90 bp TTGGGTTGCTTTTACCGCCAGCAGCATGTGACACTGTACTTACTGAGAAGGAACTTGAGCCCAAGAGTTTaGGACCAGCCTGGGCAACAT +
Preference number: 2 (lower is better)
Translates to: LGCFYRQQHVTLYLLRRNLSPRV*DQPGQH
Trigger: ATGTTGCCCAGGCTGGTCTCAAACTCTTGGGCTCAA...GTTCCTTCTCAGTAAGTACAGTGTCACATGCTGCTGGCGGTAAAAGCAACCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519565.5
ENST00000521654.6
3UTR-3UTR GCA 90 bp ACACCAAGTCTCACAAGATGGCCTGGAAGGAGGTGCAGAGTTCAAAGACAGTCCTCTGCATGTTACCAGTaGATACCTGTCCGTGATCGT +
Preference number: 2 (lower is better)
Translates to: TPSLTRWPGRRCRVQRQSSACYQ*IPVRDR
Trigger: ACGATCACGGACAGGTATGCACTGGTAACATGCAGA...GGACTGTCTTTGAACTCTGCACCTCCTTCCAGGCCATCTTGTGAGACTTGGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359704.2
ENST00000519565.5
ENST00000560949.5
3UTR-3UTR CCA 90 bp ACCAAGTCTCACAAGATGGCCTGGAAGGAGGTGCAGAGTTCAAAGACAGTCCAAGATGGGTGTACCCTTTaGTATCGCTCCTACTCCAAC +
Preference number: 2 (lower is better)
Translates to: TKSHKMAWKEVQSSKTVQDGCTL*YRSYSN
Trigger: GTTGGAGTAGGAGCGATACCAAAGGGTACACCCATC...TTGGACTGTCTTTGAACTCTGCACCTCCTTCCAGGCCATCTTGTGAGACTTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359704.2
ENST00000368414.6
ENST00000519565.5
ENST00000521654.6
ENST00000560949.5
3UTR-3UTR CCA 90 bp AGACTGACCCTCGCACTAATCTCCTTAAATGAGGTCTCTCTGGGAGGTAGCGATTCACGATTGGTTGGCTaGGGTATCCATGTCAGTGCT +
Preference number: 2 (lower is better)
Translates to: RLTLALISLNEVSLGGSDSRLVG*GIHVSA
Trigger: AGCACTGACATGGATACCCCAGCCAACCAATCGTGA...ATCGCTACCTCCCAGAGAGACCTCATTTAAGGAGATTAGTGCGAGGGTCAGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432158.6
3UTR-3UTR CCA 90 bp ACACCAAGTCTCACAAGATGGCCTGGAAGGAGGTGCAGAGTTCAAAGACAGTCCTGTGAGCAGGTCATATaGTCACATCCTTCAGTTCGC +
Preference number: 2 (lower is better)
Translates to: TPSLTRWPGRRCRVQRQSCEQVI*SHPSVR
Trigger: GCGAACTGAAGGATGTGACCATATGACCTGCTCACA...GGACTGTCTTTGAACTCTGCACCTCCTTCCAGGCCATCTTGTGAGACTTGGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519565.5
3UTR-3UTR CCA 90 bp CTCACAAGATGGCCTGGAAGGAGGTGCAGAGTTCAAAGACAGTCCAAGCAATTCACTGAGGACATGGCTTaGTGCTGGAATCAATACGGC +
Preference number: 2 (lower is better)
Translates to: LTRWPGRRCRVQRQSKQFTEDMA*CWNQYG
Trigger: GCCGTATTGATTCCAGCACCAAGCCATGTCCTCAGT...GAATTGCTTGGACTGTCTTTGAACTCTGCACCTCCTTCCAGGCCATCTTGTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519565.5
3UTR-3UTR TCA 90 bp TTGGGTTGCTTTTACCGCCAGCAGCATGTGACACTGTACTTACTGAGAAGGAACCAGCCTGGGCAACATTaGGAGAACCTCTGTCTCAAA +
Preference number: 2 (lower is better)
Translates to: LGCFYRQQHVTLYLLRRNQPGQH*ENLCLK
Trigger: TTTGAGACAGAGGTTCTCTCAATGTTGCCCAGGCTG...GTTCCTTCTCAGTAAGTACAGTGTCACATGCTGCTGGCGGTAAAAGCAACCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519565.5
ENST00000521654.6
3UTR-3UTR GCA 90 bp ATGTGGAAAAATAGTGTAGCGGCATGGAACTGGGTAAGTACAAGGTTACTGGGCTGGCCTGGAAGGAGGTaGAGAGTTCAAAGACAGTCC +
Preference number: 2 (lower is better)
Translates to: MWKNSVAAWNWVSTRLLGWPGRR*RVQRQS
Trigger: GGACTGTCTTTGAACTCTGCACCTCCTTCCAGGCCA...GCCCAGTAACCTTGTACTTACCCAGTTCCATGCCGCTACACTATTTTTCCACAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000368414.6
ENST00000519565.5
ENST00000521654.6
ENST00000560949.5
3UTR-3UTR GCA 90 bp GTGTTACATTGTGAGCAGGTCATATGGTCACATCCTTCAGTTCGCTGGATGTGGTTCTGGGCATTCCTCTaGCCATGCTCAATTTCGCTG +
Preference number: 2 (lower is better)
Translates to: VLHCEQVIWSHPSVRWMWFWAFL*PCSISL
Trigger: CAGCGAAATTGAGCATGGGCAGAGGAATGCCCAGAA...CCACATCCAGCGAACTGAAGGATGTGACCATATGACCTGCTCACAATGTAACAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000432158.6
ENST00000519565.5
3UTR-3UTR GCA 90 bp GGTGCAGAGTTCAAAGACAGTCCAAGCAATTCTCAGAAGAGGCGTGCTCAGAATGCTGGATGTGGATCTTaGACTTTGGACACTTCTGGG +
Preference number: 2 (lower is better)
Translates to: GAEFKDSPSNSQKRRAQNAGCGS*TLDTSG
Trigger: CCCAGAAGTGTCCAAAGTGCAAGATCCACATCCAGC...ATTCTGAGCACGCCTCTTCTGAGAATTGCTTGGACTGTCTTTGAACTCTGCACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519565.5
3UTR-3UTR CCA 90 bp AAGGAGGTGCAGAGTTCAAAGACAGTCCAAGCAATTCTCAGAAGAGGCGTGCTCGATGTGACTCACAGATaGGTGTACCCTTTGGTATCG +
Preference number: 2 (lower is better)
Translates to: KEVQSSKTVQAILRRGVLDVTHR*VYPLVS
Trigger: CGATACCAAAGGGTACACCCATCTGTGAGTCACATC...GAGCACGCCTCTTCTGAGAATTGCTTGGACTGTCTTTGAACTCTGCACCTCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359704.2
ENST00000368414.6
ENST00000519565.5
ENST00000521654.6
ENST00000560949.5
3UTR-3UTR CCA 90 bp AGACTGACCCTCGCACTAATCTCCTTAAATGAGGTCTCTCTGGGAGGTAGCGATAATCTCACGATTGGTTaGCTGGGGTATCCATGTCAG +
Preference number: 2 (lower is better)
Translates to: RLTLALISLNEVSLGGSDNLTIG*LGYPCQ
Trigger: CTGACATGGATACCCCAGCCAACCAATCGTGAGATT...ATCGCTACCTCCCAGAGAGACCTCATTTAAGGAGATTAGTGCGAGGGTCAGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432158.6
3UTR-3UTR CCA 90 bp AGACTGACCCTCGCACTAATCTCCTTAAATGAGGTCTCTCTGGGAGGTAGCGATCATGAATCTCACGATTaGTTGGCTGGGGTATCCATG +
Preference number: 2 (lower is better)
Translates to: RLTLALISLNEVSLGGSDHESHD*LAGVSM
Trigger: CATGGATACCCCAGCCAACCAATCGTGAGATTCATG...ATCGCTACCTCCCAGAGAGACCTCATTTAAGGAGATTAGTGCGAGGGTCAGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432158.6
3UTR-3UTR CCA 90 bp AGACTGACCCTCGCACTAATCTCCTTAAATGAGGTCTCTCTGGGAGGTAGCGATTGTGAGCAGGTCATATaGTCACATCCTTCAGTTCGC +
Preference number: 2 (lower is better)
Translates to: RLTLALISLNEVSLGGSDCEQVI*SHPSVR
Trigger: GCGAACTGAAGGATGTGACCATATGACCTGCTCACA...ATCGCTACCTCCCAGAGAGACCTCATTTAAGGAGATTAGTGCGAGGGTCAGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000432158.6
ENST00000519565.5
3UTR-3UTR CCA 90 bp CAAGATGGCCTGGAAGGAGGTGCAGAGTTCAAAGACAGTCCAAGCAATTCTCAGGACATGGCTTGGTGCTaGAATCAATACGGCCAAGTT +
Preference number: 2 (lower is better)
Translates to: QDGLEGGAEFKDSPSNSQDMAWC*NQYGQV
Trigger: AACTTGGCCGTATTGATTCCAGCACCAAGCCATGTC...CTGAGAATTGCTTGGACTGTCTTTGAACTCTGCACCTCCTTCCAGGCCATCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519565.5
3UTR-3UTR TCA 90 bp AAGGAGGTGCAGAGTTCAAAGACAGTCCAAGCAATTCTCAGAAGAGGCGTGCTCACCAGCTTAGCTGGATaGAATCATCTGCATGTTACC +
Preference number: 2 (lower is better)
Translates to: KEVQSSKTVQAILRRGVLTSLAG*NHLHVT
Trigger: GGTAACATGCAGATGATTTCATCCAGCTAAGCTGGT...GAGCACGCCTCTTCTGAGAATTGCTTGGACTGTCTTTGAACTCTGCACCTCCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359704.2
ENST00000519565.5
ENST00000560949.5
3UTR-3UTR CCA 90 bp GCAGCAATTTGTTTAGGGAAAGGACAGGATACCATGTTGGGAGTGCACCATAGCGATGTGACTCACAGATaGGTGTACCCTTTGGTATCG +
Preference number: 2 (lower is better)
Translates to: AAICLGKGQDTMLGVHHSDVTHR*VYPLVS
Trigger: CGATACCAAAGGGTACACCCATCTGTGAGTCACATC...GCTATGGTGCACTCCCAACATGGTATCCTGTCCTTTCCCTAAACAAATTGCTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359704.2
ENST00000368414.6
ENST00000519565.5
ENST00000521654.6
ENST00000560949.5
3UTR-3UTR CCA 90 bp CGAAGTGAACACATCACAGATTCGCAGAGAACCAATGACAGCATAGCTTGCCAGGTAGCGGCATGGAACTaGGTAAGTACAAGGTTACTG +
Preference number: 2 (lower is better)
Translates to: RSEHITDSQRTNDSIACQVAAWN*VSTRLL
Trigger: CAGTAACCTTGTACTTACCCAGTTCCATGCCGCTAC...CTGGCAAGCTATGCTGTCATTGGTTCTCTGCGAATCTGTGATGTGTTCACTTCG
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519565.5
ENST00000521654.6
3UTR-3UTR CCA 90 bp GTTACGGGCGAGACAGAATTTATCCCACACTTGGCCAAGATGGGAAGAAGACTGAATAGTGTAGCGGCATaGAACTGGGTAAGTACAAGG +
Preference number: 2 (lower is better)
Translates to: VTGETEFIPHLAKMGRRLNSVAA*NWVSTR
Trigger: CCTTGTACTTACCCAGTTCCATGCCGCTACACTATT...CAGTCTTCTTCCCATCTTGGCCAAGTGTGGGATAAATTCTGTCTCGCCCGTAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519565.5
ENST00000521654.6
3UTR-3UTR CCA 90 bp TTGGTACAGATAGGACTTCAGCTATTAACACCAAGTCTCACAAGATGGCCTGGACACTTTGGACACTTCTaGGCATTCCTCTGCCCATGC +
Preference number: 2 (lower is better)
Translates to: LVQIGLQLLTPSLTRWPGHFGHF*AFLCPC
Trigger: GCATGGGCAGAGGAATGCCCAGAAGTGTCCAAAGTG...TCCAGGCCATCTTGTGAGACTTGGTGTTAATAGCTGAAGTCCTATCTGTACCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519565.5
3UTR-3UTR CCA 90 bp TCTGCCCATGCTCAATTTCGCTGGCCCAGTGACGCAACAATTTGTCTCCTTTTTCTTGCACTGAGGACATaGCTTGGTGCTGGAATCAAT +
Preference number: 2 (lower is better)
Translates to: SAHAQFRWPSDATICLLFLALRT*LGAGIN
Trigger: ATTGATTCCAGCACCAAGCCATGTCCTCAGTGCAAG...AAAAAGGAGACAAATTGTTGCGTCACTGGGCCAGCGAAATTGAGCATGGGCAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000519565.5
3UTR-3UTR TCA 90 bp AAGGACAGGATACCATGTTGGGAGTGCACCATAGCTAGAGGCATTGTGGCCCACAGAAGTACTTATACTTaGTGGAGTCTTCATGCGTTA +
Preference number: 2 (lower is better)
Translates to: KDRIPCWECTIARGIVAHRSTYT*WSLHAL
Trigger: TAACGCATGAAGACTCCATCAAGTATAAGTACTTCT...GTGGGCCACAATGCCTCTAGCTATGGTGCACTCCCAACATGGTATCCTGTCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519565.5
3UTR-3UTR TCA 90 bp CAAGATGGCCTGGAAGGAGGTGCAGAGTTCAAAGACAGTCCAAGCAATTCTCAGTTTGTATTTGCTTTCTaGTCTGGAAGGGGTGGGAAT +
Preference number: 2 (lower is better)
Translates to: QDGLEGGAEFKDSPSNSQFVFAF*SGRGGN
Trigger: ATTCCCACCCCTTCCAGATCAGAAAGCAAATACAAA...CTGAGAATTGCTTGGACTGTCTTTGAACTCTGCACCTCCTTCCAGGCCATCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519565.5
3UTR-3UTR TCA 90 bp GTTACGGGCGAGACAGAATTTATCCCACACTTGGCCAAGATGGGAAGAAGACTGATCAGGGACTGGAAATaGTTACAGTGGTTCATAGGT +
Preference number: 2 (lower is better)
Translates to: VTGETEFIPHLAKMGRRLIRDWK*LQWFIG
Trigger: ACCTATGAACCACTGTAATCATTTCCAGTCCCTGAT...CAGTCTTCTTCCCATCTTGGCCAAGTGTGGGATAAATTCTGTCTCGCCCGTAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519565.5
ENST00000521654.6
3UTR-3UTR GCA 90 bp TTTTCAAGATGTGACTCACAGATGGGTGTACCCTTTGGTATCGCTCCTACTCCATCTGCATGTTACCAGTaGATACCTGTCCGTGATCGT +
Preference number: 2 (lower is better)
Translates to: FSRCDSQMGVPFGIAPTPSACYQ*IPVRDR
Trigger: ACGATCACGGACAGGTATGCACTGGTAACATGCAGA...TGGAGTAGGAGCGATACCAAAGGGTACACCCATCTGTGAGTCACATCTTGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359704.2
ENST00000519565.5
ENST00000560949.5
3UTR-3UTR GCA 90 bp TTGGTACAGATAGGACTTCAGCTATTAACACCAAGTCTCACAAGATGGCCTGGAGAGGACATGGCTTGGTaGTGGAATCAATACGGCCAA +
Preference number: 2 (lower is better)
Translates to: LVQIGLQLLTPSLTRWPGEDMAW*WNQYGQ
Trigger: TTGGCCGTATTGATTCCAGCACCAAGCCATGTCCTC...TCCAGGCCATCTTGTGAGACTTGGTGTTAATAGCTGAAGTCCTATCTGTACCAA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519565.5
3UTR CAA 90 bp AACACCTTCATGCCAAGGAGAGTGGCACTTAAAACACCAGACGAATaGGCAGGTAGGGCACTGGATCTGTTCATCACAAAGAACAAAGAT +
Preference number: 2 (lower is better)
Translates to: NTFMPRRVALKTPDE*AGRALDLFITKNKD
Trigger: ATCTTTGTTCTTTGTGATGAACAGATCCAGTGCCCTACCTGCCAATTCGTCTGGTGTTTTAAGTGCCACTCTCCTTGGCATGAAGGTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432158.6
3UTR-3UTR TCA 90 bp GTTACGGGCGAGACAGAATTTATCCCACACTTGGCCAAGATGGGAAGAAGACTGCCTCTTCTCCTTCAGTaGAGAGGAATAGTTAGAATA +
Preference number: 2 (lower is better)
Translates to: VTGETEFIPHLAKMGRRLPLLLQ*RGIVRI
Trigger: TATTCTAACTATTCCTCTTCACTGAAGGAGAAGAGG...CAGTCTTCTTCCCATCTTGGCCAAGTGTGGGATAAATTCTGTCTCGCCCGTAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519565.5
ENST00000521654.6
3UTR-3UTR CCA 90 bp TGGCCTTGCTTGTTGGTACAGATAGGACTTCAGCTATTAACACCAAGTCTCACAGATGTGACTCACAGATaGGTGTACCCTTTGGTATCG +
Preference number: 2 (lower is better)
Translates to: WPCLLVQIGLQLLTPSLTDVTHR*VYPLVS
Trigger: CGATACCAAAGGGTACACCCATCTGTGAGTCACATC...TGTGAGACTTGGTGTTAATAGCTGAAGTCCTATCTGTACCAACAAGCAAGGCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359704.2
ENST00000368414.6
ENST00000519565.5
ENST00000521654.6
ENST00000560949.5
3UTR-3UTR CCA 90 bp ATCTCCTTAAATGAGGTCTCTCTGGGAGGTAGCGATATTTGCATCCAAATATACCACTTTGGACACTTCTaGGCATTCCTCTGCCCATGC +
Preference number: 2 (lower is better)
Translates to: ISLNEVSLGGSDICIQIYHFGHF*AFLCPC
Trigger: GCATGGGCAGAGGAATGCCCAGAAGTGTCCAAAGTG...GTATATTTGGATGCAAATATCGCTACCTCCCAGAGAGACCTCATTTAAGGAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000432158.6
ENST00000519565.5
3UTR-3UTR CCA 90 bp TTGGTACAGATAGGACTTCAGCTATTAACACCAAGTCTCACAAGATGGCCTGGATCAGTTCGCTGGATGTaGATCTTGCACTTTGGACAC +
Preference number: 2 (lower is better)
Translates to: LVQIGLQLLTPSLTRWPGSVRWM*ILHFGH
Trigger: GTGTCCAAAGTGCAAGATCCACATCCAGCGAACTGA...TCCAGGCCATCTTGTGAGACTTGGTGTTAATAGCTGAAGTCCTATCTGTACCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519565.5
3UTR-3UTR CCA 90 bp TGCTTTTACCGCCAGCAGCATGTGACACTGTACTTACTGAGAAGGAACAGTACATCCAACCAGCTTAGCTaGATGAAATCATCTGCATGT +
Preference number: 2 (lower is better)
Translates to: CFYRQQHVTLYLLRRNSTSNQLS*MKSSAC
Trigger: ACATGCAGATGATTTCATCCAGCTAAGCTGGTTGGA...TGTACTGTTCCTTCTCAGTAAGTACAGTGTCACATGCTGCTGGCGGTAAAAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519565.5
3UTR-3UTR CCA 90 bp CGAAGTGAACACATCACAGATTCGCAGAGAACCAATGACAGCATAGCTTGCCAGTTTGTAGAAAGTGTCTaGAAGGACACATACCAAACC +
Preference number: 2 (lower is better)
Translates to: RSEHITDSQRTNDSIACQFVESV*KDTYQT
Trigger: GGTTTGGTATGTGTCCTTCCAGACACTTTCTACAAA...CTGGCAAGCTATGCTGTCATTGGTTCTCTGCGAATCTGTGATGTGTTCACTTCG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519565.5
ENST00000521654.6
3UTR-3UTR CCA 90 bp CGAAGTGAACACATCACAGATTCGCAGAGAACCAATGACAGCATAGCTTGCCAGTTCTGGGAATTGCTGTaGGCATTTATAATTGCCAAC +
Preference number: 2 (lower is better)
Translates to: RSEHITDSQRTNDSIACQFWELL*AFIIAN
Trigger: GTTGGCAATTATAAATGCCCACAGCAATTCCCAGAA...CTGGCAAGCTATGCTGTCATTGGTTCTCTGCGAATCTGTGATGTGTTCACTTCG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519565.5
ENST00000521654.6
3UTR-3UTR TCA 90 bp CTGCTGGGGCCACAGATTATAATAGGTGCATTCAGTGAACTCTTATCTTCTGAAACCAGCTTAGCTGGATaGAATCATCTGCATGTTACC +
Preference number: 2 (lower is better)
Translates to: LLGPQIIIGAFSELLSSETSLAG*NHLHVT
Trigger: GGTAACATGCAGATGATTTCATCCAGCTAAGCTGGT...TTCAGAAGATAAGAGTTCACTGAATGCACCTATTATAATCTGTGGCCCCAGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359704.2
ENST00000519565.5
ENST00000560949.5
3UTR-3UTR TCA 90 bp TGCTTTTACCGCCAGCAGCATGTGACACTGTACTTACTGAGAAGGAACAGTACAAGAAATAAAAATCCCTaGGTAGGCCAAAGACAACAG +
Preference number: 2 (lower is better)
Translates to: CFYRQQHVTLYLLRRNSTRNKNP*VGQRQQ
Trigger: CTGTTGTCTTTGGCCTACTCAGGGATTTTTATTTCT...TGTACTGTTCCTTCTCAGTAAGTACAGTGTCACATGCTGCTGGCGGTAAAAGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000519565.5
ENST00000521654.6
3UTR-3UTR TCA 90 bp CGAAGTGAACACATCACAGATTCGCAGAGAACCAATGACAGCATAGCTTGCCAGTTTCTTGGATTTGGATaGAGTCAACCAAAGTTACAG +
Preference number: 2 (lower is better)
Translates to: RSEHITDSQRTNDSIACQFLGFG*SQPKLQ
Trigger: CTGTAACTTTGGTTGACTTCATCCAAATCCAAGAAA...CTGGCAAGCTATGCTGTCATTGGTTCTCTGCGAATCTGTGATGTGTTCACTTCG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519565.5
ENST00000521654.6
3UTR-3UTR GCA 90 bp TCAATACGGCCAAGTTCCAAGAAGTACTTATACTTGATGGAGTCTTCATGCGTTTCTGCATGTTACCAGTaGATACCTGTCCGTGATCGT +
Preference number: 2 (lower is better)
Translates to: SIRPSSKKYLYLMESSCVSACYQ*IPVRDR
Trigger: ACGATCACGGACAGGTATGCACTGGTAACATGCAGA...AACGCATGAAGACTCCATCAAGTATAAGTACTTCTTGGAACTTGGCCGTATTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519565.5
3UTR-3UTR GCA 90 bp CTGCTGGGGCCACAGATTATAATAGGTGCATTCAGTGAACTCTTATCTTCTGAAATACCATGTTGGGAGTaGACCATAGCTAGAGGCATT +
Preference number: 2 (lower is better)
Translates to: LLGPQIIIGAFSELLSSEIPCWE*TIARGI
Trigger: AATGCCTCTAGCTATGGTGCACTCCCAACATGGTAT...TTCAGAAGATAAGAGTTCACTGAATGCACCTATTATAATCTGTGGCCCCAGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359704.2
ENST00000368414.6
ENST00000519565.5
ENST00000521654.6
ENST00000560949.5
3UTR-3UTR CCA 90 bp CTCTGTTTCTTGGATTTGGATGAAGTCAACCAAAGTTACAGCCTTACAATTAGTCCAAGTCTCACAAGATaGCCTGGAAGGAGGTGCAGA +
Preference number: 2 (lower is better)
Translates to: LCFLDLDEVNQSYSLTISPSLTR*PGRRCR
Trigger: TCTGCACCTCCTTCCAGGCCATCTTGTGAGACTTGG...ACTAATTGTAAGGCTGTAACTTTGGTTGACTTCATCCAAATCCAAGAAACAGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519565.5
ENST00000521654.6
3UTR-3UTR CCA 90 bp ATAAATCCACCCCAAGTCCAAGCTGTAGGACGTTTTGCTGAAACAAAGACCATAAATAGTGTAGCGGCATaGAACTGGGTAAGTACAAGG +
Preference number: 2 (lower is better)
Translates to: INPPQVQAVGRFAETKTINSVAA*NWVSTR
Trigger: CCTTGTACTTACCCAGTTCCATGCCGCTACACTATT...TATGGTCTTTGTTTCAGCAAAACGTCCTACAGCTTGGACTTGGGGTGGATTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519565.5
ENST00000521654.6
3UTR-3UTR CCA 90 bp CGAAGTGAACACATCACAGATTCGCAGAGAACCAATGACAGCATAGCTTGCCAGAGAATGAAAGCATGCTaGATTGTTATTCACGCAAGT +
Preference number: 2 (lower is better)
Translates to: RSEHITDSQRTNDSIACQRMKAC*IVIHAS
Trigger: ACTTGCGTGAATAACAATCCAGCATGCTTTCATTCT...CTGGCAAGCTATGCTGTCATTGGTTCTCTGCGAATCTGTGATGTGTTCACTTCG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519565.5
ENST00000521654.6
3UTR-3UTR CCA 90 bp CGAAGTGAACACATCACAGATTCGCAGAGAACCAATGACAGCATAGCTTGCCAGAGTTGGTCATATACTTaGGTGGTAAGGTTGAAAGAT +
Preference number: 2 (lower is better)
Translates to: RSEHITDSQRTNDSIACQSWSYT*VVRLKD
Trigger: ATCTTTCAACCTTACCACCCAAGTATATGACCAACT...CTGGCAAGCTATGCTGTCATTGGTTCTCTGCGAATCTGTGATGTGTTCACTTCG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519565.5
ENST00000521654.6
3UTR-3UTR GCA 90 bp ATTCTGTGTTATTCAGAAAGAATGAAAGCATGCTGGATTGTTATTCACGCAAGTTGGCCTGGAAGGAGGTaGAGAGTTCAAAGACAGTCC +
Preference number: 2 (lower is better)
Translates to: ILCYSERMKACWIVIHASWPGRR*RVQRQS
Trigger: GGACTGTCTTTGAACTCTGCACCTCCTTCCAGGCCA...ACTTGCGTGAATAACAATCCAGCATGCTTTCATTCTTTCTGAATAACACAGAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519565.5
ENST00000521654.6
ENST00000560949.5
3UTR-3UTR CCA 90 bp TTGGCAGATGTGCCCTCATTTGACAAAGGTCAGGAAGGAATTCTAATGTTTCCCAGTTCAGTATCGAAATaGCCTGTTGTCTACATTGAC +
Preference number: 2 (lower is better)
Translates to: LADVPSFDKGQEGILMFPSSVSK*PVVYID
Trigger: GTCAATGTAGACAACAGGCCATTTCGATACTGAACT...GGGAAACATTAGAATTCCTTCCTGACCTTTGTCAAATGAGGGCACATCTGCCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519565.5
ENST00000521654.6
3UTR CAA 90 bp AAATTATGCTCACTACCAGAGCTAAATTCTGGAGTGCGTTCAGTGTaGAATTCATTTCATTACAGTGAAAGGAGTTACGGGCGAGACAGA +
Preference number: 2 (lower is better)
Translates to: KLCSLPELNSGVRSV*NSFHYSERSYGRDR
Trigger: TCTGTCTCGCCCGTAACTCCTTTCACTGTAATGAAATGAATTCAACACTGAACGCACTCCAGAATTTAGCTCTGGTAGTGAGCATAATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519565.5
ENST00000521654.6
3UTR-3UTR TCA 90 bp TTGAAAGATAAAAGAATTATACTGCTGGGGCCACAGATTATAATAGGTGCATTCATTTCGCTGGCCCAGTaGCGCAACAATTTGTCTCCT +
Preference number: 2 (lower is better)
Translates to: LKDKRIILLGPQIIIGAFISLAQ*RNNLSP
Trigger: AGGAGACAAATTGTTGCGTCACTGGGCCAGCGAAAT...GAATGCACCTATTATAATCTGTGGCCCCAGCAGTATAATTCTTTTATCTTTCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519565.5
3UTR-3UTR TCA 90 bp TGCTTGTTGGTACAGATAGGACTTCAGCTATTAACACCAAGTCTCACAAGATGGATTAGTGTTACATTGTaGGCAGGTCATATGGTCACA +
Preference number: 2 (lower is better)
Translates to: CLLVQIGLQLLTPSLTRWISVTL*AGHMVT
Trigger: TGTGACCATATGACCTGCTCACAATGTAACACTAAT...CCATCTTGTGAGACTTGGTGTTAATAGCTGAAGTCCTATCTGTACCAACAAGCA
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519565.5
3UTR-3UTR GCA 90 bp AGAATTATACTGCTGGGGCCACAGATTATAATAGGTGCATTCAGTGAACTCTTAATACCATGTTGGGAGTaGACCATAGCTAGAGGCATT +
Preference number: 2 (lower is better)
Translates to: RIILLGPQIIIGAFSELLIPCWE*TIARGI
Trigger: AATGCCTCTAGCTATGGTGCACTCCCAACATGGTAT...TAAGAGTTCACTGAATGCACCTATTATAATCTGTGGCCCCAGCAGTATAATTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359704.2
ENST00000368414.6
ENST00000519565.5
ENST00000521654.6
ENST00000560949.5
3UTR-3UTR GCA 90 bp TGCTTTTACCGCCAGCAGCATGTGACACTGTACTTACTGAGAAGGAACAGTACAACATCCCTAAAGATATaGTTTCTCCTTAGCACTTTA +
Preference number: 2 (lower is better)
Translates to: CFYRQQHVTLYLLRRNSTTSLKI*FLLSTL
Trigger: TAAAGTGCTAAGGAGAAAGCATATCTTTAGGGATGT...TGTACTGTTCCTTCTCAGTAAGTACAGTGTCACATGCTGCTGGCGGTAAAAGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519565.5
ENST00000521654.6
3UTR-3UTR TCA 90 bp CTCTGTTTCTTGGATTTGGATGAAGTCAACCAAAGTTACAGCCTTACAATTAGTACCAGCTTAGCTGGATaGAATCATCTGCATGTTACC +
Preference number: 2 (lower is better)
Translates to: LCFLDLDEVNQSYSLTISTSLAG*NHLHVT
Trigger: GGTAACATGCAGATGATTTCATCCAGCTAAGCTGGT...ACTAATTGTAAGGCTGTAACTTTGGTTGACTTCATCCAAATCCAAGAAACAGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519565.5
3UTR-3UTR TCA 90 bp AAAACAATAAAGCAGACCATGGGAAAGATCACTCTCAATAGTTGGGAGAGATTTTTGTACCAAAAGGTTTaGCCCCTCTCTTCTTACTCC +
Preference number: 2 (lower is better)
Translates to: KTIKQTMGKITLNSWERFLYQKV*PLSSYS
Trigger: GGAGTAAGAAGAGAGGGGTCAAACCTTTTGGTACAA...AAATCTCTCCCAACTATTGAGAGTGATCTTTCCCATGGTCTGCTTTATTGTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000519565.5
ENST00000521654.6
3UTR-3UTR GCA 90 bp TTGGCAGATGTGCCCTCATTTGACAAAGGTCAGGAAGGAATTCTAATGTTTCCCAAAATGAAAAACCTGTaGAACACAGTGCACACTATT +
Preference number: 2 (lower is better)
Translates to: LADVPSFDKGQEGILMFPKMKNL*NTVHTI
Trigger: AATAGTGTGCACTGTGTTGCACAGGTTTTTCATTTT...GGGAAACATTAGAATTCCTTCCTGACCTTTGTCAAATGAGGGCACATCTGCCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000519565.5
ENST00000521654.6
3UTR-3UTR CCA 90 bp AGAATTATACTGCTGGGGCCACAGATTATAATAGGTGCATTCAGTGAACTCTTATCCAACCAGCTTAGCTaGATGAAATCATCTGCATGT +
Preference number: 2 (lower is better)
Translates to: RIILLGPQIIIGAFSELLSNQLS*MKSSAC
Trigger: ACATGCAGATGATTTCATCCAGCTAAGCTGGTTGGA...TAAGAGTTCACTGAATGCACCTATTATAATCTGTGGCCCCAGCAGTATAATTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359704.2
ENST00000519565.5
ENST00000560949.5
3UTR-3UTR CCA 90 bp TTGAAAGATAAAAGAATTATACTGCTGGGGCCACAGATTATAATAGGTGCATTCGATGTGACTCACAGATaGGTGTACCCTTTGGTATCG +
Preference number: 2 (lower is better)
Translates to: LKDKRIILLGPQIIIGAFDVTHR*VYPLVS
Trigger: CGATACCAAAGGGTACACCCATCTGTGAGTCACATC...GAATGCACCTATTATAATCTGTGGCCCCAGCAGTATAATTCTTTTATCTTTCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359704.2
ENST00000368414.6
ENST00000519565.5
ENST00000521654.6
ENST00000560949.5
3UTR-3UTR CCA 90 bp CTCCCAAAAGTTACTACTACTGTTTTACCTTCAAAGTTGGCACTGACATATAAAGTAGCGGCATGGAACTaGGTAAGTACAAGGTTACTG +
Preference number: 2 (lower is better)
Translates to: LPKVTTTVLPSKLALTYKVAAWN*VSTRLL
Trigger: CAGTAACCTTGTACTTACCCAGTTCCATGCCGCTAC...TTTATATGTCAGTGCCAACTTTGAAGGTAAAACAGTAGTAGTAACTTTTGGGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000519565.5
ENST00000521654.6
ENST00000560949.5
3UTR-3UTR GCA 90 bp AACAAGATGTTGCTTGTACCAAAAGGTTTGACCCCTCTCTTCTTACTCCACATAGGTGACAAAAATATATaGAAAAGGGTCTTCACTCTT +
Preference number: 2 (lower is better)
Translates to: NKMLLVPKGLTPLFLLHIGDKNI*KRVFTL
Trigger: AAGAGTGAAGACCCTTTTGCATATATTTTTGTCACC...TATGTGGAGTAAGAAGAGAGGGGTCAAACCTTTTGGTACAAGCAACATCTTGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000519565.5
ENST00000521654.6
3UTR-3UTR CCA 90 bp ATTCTGTGTTATTCAGAAAGAATGAAAGCATGCTGGATTGTTATTCACGCAAGTTCCAACCAGCTTAGCTaGATGAAATCATCTGCATGT +
Preference number: 2 (lower is better)
Translates to: ILCYSERMKACWIVIHASSNQLS*MKSSAC
Trigger: ACATGCAGATGATTTCATCCAGCTAAGCTGGTTGGA...ACTTGCGTGAATAACAATCCAGCATGCTTTCATTCTTTCTGAATAACACAGAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519565.5
ENST00000560949.5
3UTR-3UTR CCA 90 bp GCACCACTGAATCTTGATACCACAGCAGAGAAAGTACAATTAAAGATATCATGTAAGCTTAATACTCCTTaGGGTGACGTTGCACAAATT +
Preference number: 2 (lower is better)
Translates to: APLNLDTTAEKVQLKISCKLNTP*GDVAQI
Trigger: AATTTGTGCAACGTCACCCCAAGGAGTATTAAGCTT...ACATGATATCTTTAATTGTACTTTCTCTGCTGTGGTATCAAGATTCAGTGGTGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519565.5
ENST00000521654.6
3UTR CCA 72 bp GTTCGCTGGATGTGGATCTTGCACTTTGGACACTTCTaGGCATTCCTCTGCCCATGCTCAATTTCGCTGGCC +
Preference number: 3 (lower is better)
Translates to: VRWMWILHFGHF*AFLCPCSISLA
Trigger: GGCCAGCGAAATTGAGCATGGGCAGAGGAATGCCCAGAAGTGTCCAAAGTGCAAGATCCACATCCAGCGAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000432158.6
ENST00000519565.5
3UTR-3UTR CAA 90 bp ACACCAAGTCTCACAAGATGGCCTGGAAGGAGGTGCAGAGTTCAAAGACAGTCCAGATGGGTGTACCCTTaGGTATCGCTCCTACTCCAA +
Preference number: 3 (lower is better)
Translates to: TPSLTRWPGRRCRVQRQSRWVYP*VSLLLQ
Trigger: TTGGAGTAGGAGCGATACCAAAGGGTACACCCATCT...GGACTGTCTTTGAACTCTGCACCTCCTTCCAGGCCATCTTGTGAGACTTGGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359704.2
ENST00000368414.6
ENST00000519565.5
ENST00000521654.6
ENST00000560949.5
3UTR CCA 72 bp TACAGGGTGCCATACTGTGGCCATGAATCTCACGATTaGTTGGCTGGGGTATCCATGTCAGTGCTCTCCTTA +
Preference number: 3 (lower is better)
Translates to: YRVPYCGHESHD*LAGVSMSVLSL
Trigger: TAAGGAGAGCACTGACATGGATACCCCAGCCAACCAATCGTGAGATTCATGGCCACAGTATGGCACCCTGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432158.6
3UTR TCA 72 bp ATCTTAGTCTCAGTACAGGGTGCCATACTGTGGCCATaGATCTCACGATTGGTTGGCTGGGGTATCCATGTC +
Preference number: 3 (lower is better)
Translates to: ILVSVQGAILWP*ISRLVGWGIHV
Trigger: GACATGGATACCCCAGCCAACCAATCGTGAGATTCATGGCCACAGTATGGCACCCTGTACTGAGACTAAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432158.6
3UTR-3UTR CAA 90 bp ACCCTCGCACTAATCTCCTTAAATGAGGTCTCTCTGGGAGGTAGCGATATTTGCAAAACACCAGACGAATaGGCAGGTAGGGCACTGGAT +
Preference number: 3 (lower is better)
Translates to: TLALISLNEVSLGGSDICKTPDE*AGRALD
Trigger: ATCCAGTGCCCTACCTGCCAATTCGTCTGGTGTTTT...GCAAATATCGCTACCTCCCAGAGAGACCTCATTTAAGGAGATTAGTGCGAGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000432158.6
ENST00000519565.5
3UTR CCA 72 bp TGCCAAGGAGAGTGGCACTTAAAACACCAGACGAATTaGCAGGTAGGGCACTGGATCTGTTCATCACAAAGA +
Preference number: 3 (lower is better)
Translates to: CQGEWHLKHQTN*QVGHWICSSQR
Trigger: TCTTTGTGATGAACAGATCCAGTGCCCTACCTGCCAATTCGTCTGGTGTTTTAAGTGCCACTCTCCTTGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432158.6
3UTR-3UTR CAA 90 bp ATTAACACCAAGTCTCACAAGATGGCCTGGAAGGAGGTGCAGAGTTCAAAGACAAGATGGGTGTACCCTTaGGTATCGCTCCTACTCCAA +
Preference number: 3 (lower is better)
Translates to: INTKSHKMAWKEVQSSKTRWVYP*VSLLLQ
Trigger: TTGGAGTAGGAGCGATACCAAAGGGTACACCCATCT...TGTCTTTGAACTCTGCACCTCCTTCCAGGCCATCTTGTGAGACTTGGTGTTAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359704.2
ENST00000368414.6
ENST00000519565.5
ENST00000521654.6
ENST00000560949.5
3UTR-3UTR CAA 90 bp TGGCCTTGCTTGTTGGTACAGATAGGACTTCAGCTATTAACACCAAGTCTCACAAGATGGGTGTACCCTTaGGTATCGCTCCTACTCCAA +
Preference number: 3 (lower is better)
Translates to: WPCLLVQIGLQLLTPSLTRWVYP*VSLLLQ
Trigger: TTGGAGTAGGAGCGATACCAAAGGGTACACCCATCT...TGTGAGACTTGGTGTTAATAGCTGAAGTCCTATCTGTACCAACAAGCAAGGCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359704.2
ENST00000368414.6
ENST00000519565.5
ENST00000521654.6
ENST00000560949.5
3UTR TCA 72 bp TCAGGAAGGAATTCTAATGTTTCCCACATACCAGAGTaGGTTTTTAGGCCCCTCCTGTCTCTCCTCTTCTCC +
Preference number: 3 (lower is better)
Translates to: SGRNSNVSHIPE*VFRPLLSLLFS
Trigger: GGAGAAGAGGAGAGACAGGAGGGGCCTAAAAACTCACTCTGGTATGTGGGAAACATTAGAATTCCTTCCTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000519565.5
ENST00000521654.6
3UTR CCA 72 bp ACCCTTTGGTATCGCTCCTACTCCAACCAGCTTAGCTaGATGAAATCATCTGCATGTTACCAGTGCATACCT +
Preference number: 3 (lower is better)
Translates to: TLWYRSYSNQLS*MKSSACYQCIP
Trigger: AGGTATGCACTGGTAACATGCAGATGATTTCATCCAGCTAAGCTGGTTGGAGTAGGAGCGATACCAAAGGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359704.2
ENST00000519565.5
ENST00000560949.5
3UTR CCA 72 bp ACTTCAGCTATTAACACCAAGTCTCACAAGATGGCCTaGAAGGAGGTGCAGAGTTCAAAGACAGTCCAAGCA +
Preference number: 3 (lower is better)
Translates to: TSAINTKSHKMA*KEVQSSKTVQA
Trigger: TGCTTGGACTGTCTTTGAACTCTGCACCTCCTTCCAGGCCATCTTGTGAGACTTGGTGTTAATAGCTGAAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359704.2
ENST00000368414.6
ENST00000519565.5
ENST00000521654.6
ENST00000560949.5
3UTR CCA 72 bp AAGGAGTTACGGGCGAGACAGAATTTATCCCACACTTaGCCAAGATGGGAAGAAGACTGCAGAGGCAAAAAT +
Preference number: 3 (lower is better)
Translates to: KELRARQNLSHT*PRWEEDCRGKN
Trigger: ATTTTTGCCTCTGCAGTCTTCTTCCCATCTTGGCCAAGTGTGGGATAAATTCTGTCTCGCCCGTAACTCCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000519565.5
ENST00000521654.6
3UTR-3UTR CAA 90 bp TCTGAAAAGTGGCCTTGCTTGTTGGTACAGATAGGACTTCAGCTATTAACACCAAAAACACCAGACGAATaGGCAGGTAGGGCACTGGAT +
Preference number: 3 (lower is better)
Translates to: SEKWPCLLVQIGLQLLTPKTPDE*AGRALD
Trigger: ATCCAGTGCCCTACCTGCCAATTCGTCTGGTGTTTT...TGGTGTTAATAGCTGAAGTCCTATCTGTACCAACAAGCAAGGCCACTTTTCAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000519565.5
3UTR GCA 72 bp TTAACACCAAGTCTCACAAGATGGCCTGGAAGGAGGTaGAGAGTTCAAAGACAGTCCAAGCAATTCTCAGAA +
Preference number: 3 (lower is better)
Translates to: LTPSLTRWPGRR*RVQRQSKQFSE
Trigger: TTCTGAGAATTGCTTGGACTGTCTTTGAACTCTGCACCTCCTTCCAGGCCATCTTGTGAGACTTGGTGTTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359704.2
ENST00000368414.6
ENST00000519565.5
ENST00000521654.6
ENST00000560949.5
3UTR CCA 72 bp TGCCAAGGAGAGTGGCACTTAAAACACCAGACGAATTaGCAGGTAGGGCACTGGATTTTGTATTTGCTTTCT +
Preference number: 3 (lower is better)
Translates to: CQGEWHLKHQTN*QVGHWILYLLS
Trigger: AGAAAGCAAATACAAAATCCAGTGCCCTACCTGCCAATTCGTCTGGTGTTTTAAGTGCCACTCTCCTTGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519565.5
3UTR CCA 72 bp GATTGGATTACTAAGAATATTTCCCAAGCTGGGGCATaGCGAAGTGAACACATCACAGATTCGCAGAGAACC +
Preference number: 3 (lower is better)
Translates to: DWITKNISQAGA*RSEHITDSQRT
Trigger: GGTTCTCTGCGAATCTGTGATGTGTTCACTTCGCCATGCCCCAGCTTGGGAAATATTCTTAGTAATCCAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519565.5
ENST00000521654.6
3UTR-3UTR CAA 90 bp ATCTCCTTAAATGAGGTCTCTCTGGGAGGTAGCGATATTTGCATCCAAATATACGAATCTCACGATTGGTaGGCTGGGGTATCCATGTCA +
Preference number: 3 (lower is better)
Translates to: ISLNEVSLGGSDICIQIYESHDW*AGVSMS
Trigger: TGACATGGATACCCCAGCCAACCAATCGTGAGATTC...GTATATTTGGATGCAAATATCGCTACCTCCCAGAGAGACCTCATTTAAGGAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432158.6
3UTR GCA 72 bp ATCACAAAGAACAAAGATCTTAGTCTCAGTACAGGGTaGCATACTGTGGCCATGAATCTCACGATTGGTTGG +
Preference number: 3 (lower is better)
Translates to: ITKNKDLSLSTG*HTVAMNLTIGW
Trigger: CCAACCAATCGTGAGATTCATGGCCACAGTATGGCACCCTGTACTGAGACTAAGATCTTTGTTCTTTGTGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432158.6
3UTR CCA 72 bp ATTTCATTTAACAAGGGAGAAGCTGGACTGATGTCTTaGCAGATGTGCCCTCATTTGACAAAGGTCAGGAAG +
Preference number: 3 (lower is better)
Translates to: ISFNKGEAGLMS*QMCPHLTKVRK
Trigger: CTTCCTGACCTTTGTCAAATGAGGGCACATCTGCCAAGACATCAGTCCAGCTTCTCCCTTGTTAAATGAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519565.5
ENST00000521654.6
3UTR-3UTR CAA 90 bp TGCTTTTACCGCCAGCAGCATGTGACACTGTACTTACTGAGAAGGAACAGTACACTCTGTTTCTTGGATTaGGATGAAGTCAACCAAAGT +
Preference number: 3 (lower is better)
Translates to: CFYRQQHVTLYLLRRNSTLCFLD*DEVNQS
Trigger: ACTTTGGTTGACTTCATCCAAATCCAAGAAACAGAG...TGTACTGTTCCTTCTCAGTAAGTACAGTGTCACATGCTGCTGGCGGTAAAAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519565.5
ENST00000521654.6
3UTR TCA 72 bp CAAGAGATAGTCAGAGTCACAGAACAAGGTATTTTCTaGCAAGCACCACTGAATCTTGATACCACAGCAGAG +
Preference number: 3 (lower is better)
Translates to: QEIVRVTEQGIF*QAPLNLDTTAE
Trigger: CTCTGCTGTGGTATCAAGATTCAGTGGTGCTTGTCAGAAAATACCTTGTTCTGTGACTCTGACTATCTCTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519565.5
ENST00000521654.6
3UTR CCA 72 bp AGGTCTATGAAAATGTGGAAAAATAGTGTAGCGGCATaGAACTGGGTAAGTACAAGGTTACTGGGCCTAGTT +
Preference number: 3 (lower is better)
Translates to: RSMKMWKNSVAA*NWVSTRLLGLV
Trigger: AACTAGGCCCAGTAACCTTGTACTTACCCAGTTCCATGCCGCTACACTATTTTTCCACATTTTCATAGACCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000368414.6
ENST00000519565.5
ENST00000521654.6
ENST00000560949.5
3UTR-3UTR CAA 90 bp GCACCACTGAATCTTGATACCACAGCAGAGAAAGTACAATTAAAGATATCATGTAGATGGGTGTACCCTTaGGTATCGCTCCTACTCCAA +
Preference number: 3 (lower is better)
Translates to: APLNLDTTAEKVQLKISCRWVYP*VSLLLQ
Trigger: TTGGAGTAGGAGCGATACCAAAGGGTACACCCATCT...ACATGATATCTTTAATTGTACTTTCTCTGCTGTGGTATCAAGATTCAGTGGTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519565.5
ENST00000521654.6
3UTR-3UTR CAA 90 bp CTGCTGGGGCCACAGATTATAATAGGTGCATTCAGTGAACTCTTATCTTCTGAACACTGGATTTTGTATTaGCTTTCTGATCTGGAAGGG +
Preference number: 3 (lower is better)
Translates to: LLGPQIIIGAFSELLSSEHWILY*LSDLEG
Trigger: CCCTTCCAGATCAGAAAGCAAATACAAAATCCAGTG...TTCAGAAGATAAGAGTTCACTGAATGCACCTATTATAATCTGTGGCCCCAGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519565.5
3UTR CCA 72 bp AGCCACAAGAATCTAAAAGGACATTTCAGCAATTTCTaGGGTCCTTTAACACTCAAGTCTGTCTCTCCCTTT +
Preference number: 3 (lower is better)
Translates to: SHKNLKGHFSNF*GPLTLKSVSPF
Trigger: AAAGGGAGAGACAGACTTGAGTGTTAAAGGACCCCAGAAATTGCTGAAATGTCCTTTTAGATTCTTGTGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519565.5
ENST00000521654.6
3UTR-3UTR CAA 90 bp TTGAAAGATAAAAGAATTATACTGCTGGGGCCACAGATTATAATAGGTGCATTCTGTGGATCTTGCACTTaGGACACTTCTGGGCATTCC +
Preference number: 3 (lower is better)
Translates to: LKDKRIILLGPQIIIGAFCGSCT*DTSGHS
Trigger: GGAATGCCCAGAAGTGTCCAAAGTGCAAGATCCACA...GAATGCACCTATTATAATCTGTGGCCCCAGCAGTATAATTCTTTTATCTTTCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519565.5
3UTR-3UTR CAA 90 bp CTCCCAAAAGTTACTACTACTGTTTTACCTTCAAAGTTGGCACTGACATATAAAAAGTGGCCTTGCTTGTaGGTACAGATAGGACTTCAG +
Preference number: 3 (lower is better)
Translates to: LPKVTTTVLPSKLALTYKKWPCL*VQIGLQ
Trigger: CTGAAGTCCTATCTGTACCAACAAGCAAGGCCACTT...TTTATATGTCAGTGCCAACTTTGAAGGTAAAACAGTAGTAGTAACTTTTGGGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000519565.5
ENST00000521654.6
ENST00000560949.5
3UTR-3UTR CAA 90 bp AAAACAATAAAGCAGACCATGGGAAAGATCACTCTCAATAGTTGGGAGAGATTTGGTGGCAACAAGATGTaGCTTGTACCAAAAGGTTTG +
Preference number: 3 (lower is better)
Translates to: KTIKQTMGKITLNSWERFGGNKM*LVPKGL
Trigger: CAAACCTTTTGGTACAAGCAACATCTTGTTGCCACC...AAATCTCTCCCAACTATTGAGAGTGATCTTTCCCATGGTCTGCTTTATTGTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519565.5
ENST00000521654.6
3UTR-3UTR CAA 90 bp CTCCCAAAAGTTACTACTACTGTTTTACCTTCAAAGTTGGCACTGACATATAAAGAAAAGTGGCCTTGCTaGTTGGTACAGATAGGACTT +
Preference number: 3 (lower is better)
Translates to: LPKVTTTVLPSKLALTYKEKWPC*LVQIGL
Trigger: AAGTCCTATCTGTACCAACAAGCAAGGCCACTTTTC...TTTATATGTCAGTGCCAACTTTGAAGGTAAAACAGTAGTAGTAACTTTTGGGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000519565.5
ENST00000521654.6
ENST00000560949.5
3UTR-3UTR CAA 90 bp CTCTGTTTCTTGGATTTGGATGAAGTCAACCAAAGTTACAGCCTTACAATTAGTCAGTTGGTCATATACTaGGGTGGTAAGGTTGAAAGA +
Preference number: 3 (lower is better)
Translates to: LCFLDLDEVNQSYSLTISQLVIY*GGKVER
Trigger: TCTTTCAACCTTACCACCCAAGTATATGACCAACTG...ACTAATTGTAAGGCTGTAACTTTGGTTGACTTCATCCAAATCCAAGAAACAGAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519565.5
ENST00000521654.6
3UTR TCA 72 bp GTGGTGGCAACAAGATGTTGCTTGTACCAAAAGGTTTaGCCCCTCTCTTCTTACTCCACATATATAAATTAT +
Preference number: 3 (lower is better)
Translates to: VVATRCCLYQKV*PLSSYSTYINY
Trigger: ATAATTTATATATGTGGAGTAAGAAGAGAGGGGTCAAACCTTTTGGTACAAGCAACATCTTGTTGCCACCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519565.5
ENST00000521654.6
3UTR TCA 72 bp AATCAATACGGCCAAGTTCCAAGAAGTACTTATACTTaGTGGAGTCTTCATGCGTTAAGTTATAGACAACAG +
Preference number: 3 (lower is better)
Translates to: NQYGQVPRSTYT*WSLHALSYRQQ
Trigger: CTGTTGTCTATAACTTAACGCATGAAGACTCCATCAAGTATAAGTACTTCTTGGAACTTGGCCGTATTGATT
38% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519565.5
CDS-3UTR GCA 90 bp ACCAAGTCTCACAAGATGGCCTGGAAGGAGGTGCAGAGTTCAAAGACAGTCCAACCACTGGCCAGGGTCTaGGACTCCTGGGGCCCGCCG +
Preference number: 4 (lower is better)
Translates to: TKSHKMAWKEVQSSKTVQPLARV*DSWGPP
Trigger: CGGCGGGCCCCAGGAGTCGCAGACCCTGGCCAGTGG...TTGGACTGTCTTTGAACTCTGCACCTCCTTCCAGGCCATCTTGTGAGACTTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560949.5
CDS-3UTR CCA 90 bp TGCACCATAGCTAGAGGCATTGTGGCCCACGGAGAATCACTGGGAGATGAGATGGGGACAGTCGGGGGCTaGGGAAGGAAGAGCGGGTGC +
Preference number: 4 (lower is better)
Translates to: CTIARGIVAHGESLGDEMGTVGG*GRKSGC
Trigger: GCACCCGCTCTTCCTTCCCCAGCCCCCGACTGTCCC...CATCTCATCTCCCAGTGATTCTCCGTGGGCCACAATGCCTCTAGCTATGGTGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560949.5
CDS-3UTR TCA 90 bp GCAGAGTTCAAAGACAGTCCAAGCAATTCTCAGAAGAGGCGTGCTCAGAATTCTAGGGACGGGCGCCGCTaGCCCAGCACGTCCAGGACC +
Preference number: 4 (lower is better)
Translates to: AEFKDSPSNSQKRRAQNSRDGRR*PSTSRT
Trigger: GGTCCTGGACGTGCTGGGTCAGCGGCGCCCGTCCCT...AGAATTCTGAGCACGCCTCTTCTGAGAATTGCTTGGACTGTCTTTGAACTCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560949.5
CDS-3UTR GCA 90 bp CAAGATGGCCTGGAAGGAGGTGCAGAGTTCAAAGACAGTCCAAGCAATTCTCAGGCCAGTCCCGCAGGCTaGGCCGGTGCTCGGCTCTTA +
Preference number: 4 (lower is better)
Translates to: QDGLEGGAEFKDSPSNSQASPAG*AGARLL
Trigger: TAAGAGCCGAGCACCGGCGCAGCCTGCGGGACTGGC...CTGAGAATTGCTTGGACTGTCTTTGAACTCTGCACCTCCTTCCAGGCCATCTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560949.5
CDS-3UTR GCA 90 bp TCAGCTATTAACACCAAGTCTCACAAGATGGCCTGGAAGGAGGTGCAGAGTTCAGAGAGGCCCGGTGAGTaGCAGTCCCGCAGGCTGCGC +
Preference number: 4 (lower is better)
Translates to: SAINTKSHKMAWKEVQSSERPGE*QSRRLR
Trigger: GCGCAGCCTGCGGGACTGGCACTCACCGGGCCTCTC...TGAACTCTGCACCTCCTTCCAGGCCATCTTGTGAGACTTGGTGTTAATAGCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560949.5
CDS-3UTR CCA 90 bp CACCAAGTCTCACAAGATGGCCTGGAAGGAGGTGCAGAGTTCAAAGACAGTCCAGGGAGGGTTCAACACTaGCGGAGCCCCAGGTGGCGA +
Preference number: 4 (lower is better)
Translates to: HQVSQDGLEGGAEFKDSPGRVQH*RSPRWR
Trigger: TCGCCACCTGGGGCTCCGCCAGTGTTGAACCCTCCC...TGGACTGTCTTTGAACTCTGCACCTCCTTCCAGGCCATCTTGTGAGACTTGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560949.5
CDS-3UTR GCA 90 bp GCAGCAATTTGTTTAGGGAAAGGACAGGATACCATGTTGGGAGTGCACCATAGCCGCAGGCTGCGCCGGTaGTCGGCTCTTACTCCAGCC +
Preference number: 4 (lower is better)
Translates to: AAICLGKGQDTMLGVHHSRRLRR*SALTPA
Trigger: GGCTGGAGTAAGAGCCGAGCACCGGCGCAGCCTGCG...GCTATGGTGCACTCCCAACATGGTATCCTGTCCTTTCCCTAAACAAATTGCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560949.5
CDS-3UTR CCA 90 bp TTGGTACAGATAGGACTTCAGCTATTAACACCAAGTCTCACAAGATGGCCTGGAGCTCCTCGCGGGCTCTaGGGCGCTGGTGTCCGCGCA +
Preference number: 4 (lower is better)
Translates to: LVQIGLQLLTPSLTRWPGAPRGL*GAGVRA
Trigger: TGCGCGGACACCAGCGCCCCAGAGCCCGCGAGGAGC...TCCAGGCCATCTTGTGAGACTTGGTGTTAATAGCTGAAGTCCTATCTGTACCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560949.5
CDS-3UTR TCA 90 bp GGAAGGAGGTGCAGAGTTCAAAGACAGTCCAAGCAATTCTCAGAAGAGGCGTGCGGCACATCAGCACCATaGGGGGCACATAGGGATCCC +
Preference number: 4 (lower is better)
Translates to: GRRCRVQRQSKQFSEEACGTSAP*GAHRDP
Trigger: GGGATCCCTATGTGCCCCTCATGGTGCTGATGTGCC...GCACGCCTCTTCTGAGAATTGCTTGGACTGTCTTTGAACTCTGCACCTCCTTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560949.5
CDS-3UTR GCA 90 bp TCTCAGTGTTTTTCAAGATGTGACTCACAGATGGGTGTACCCTTTGGTATCGCTCAGGGTGGCCCGCAGTaGCACTGGCCAGGGTCTGCG +
Preference number: 4 (lower is better)
Translates to: SQCFSRCDSQMGVPFGIAQGGPQ*HWPGSA
Trigger: CGCAGACCCTGGCCAGTGGCACTGCGGGCCACCCTG...AGCGATACCAAAGGGTACACCCATCTGTGAGTCACATCTTGAAAAACACTGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560949.5
CDS-3UTR CCA 90 bp ATACCATGTTGGGAGTGCACCATAGCTAGAGGCATTGTGGCCCACGGAGAATCATGCAGTGGCAAGGTCTaGGGATTGAGAGGCCCGGTG +
Preference number: 4 (lower is better)
Translates to: IPCWECTIARGIVAHGESCSGKV*GLRGPV
Trigger: CACCGGGCCTCTCAATCCCCAGACCTTGCCACTGCA...TGATTCTCCGTGGGCCACAATGCCTCTAGCTATGGTGCACTCCCAACATGGTAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560949.5
CDS-3UTR CCA 90 bp GATGTGACTCACAGATGGGTGTACCCTTTGGTATCGCTCCTACTCCAACCAGCTAGGAAGAGCGGGTGCTaGGAGGGTTCAACACTGGCG +
Preference number: 4 (lower is better)
Translates to: DVTHRWVYPLVSLLLQPARKSGC*EGSTLA
Trigger: CGCCAGTGTTGAACCCTCCCAGCACCCGCTCTTCCT...AGCTGGTTGGAGTAGGAGCGATACCAAAGGGTACACCCATCTGTGAGTCACATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560949.5
CDS-3UTR TCA 90 bp TGTGACTCACAGATGGGTGTACCCTTTGGTATCGCTCCTACTCCAACCAGCTTACGCTCAGGTAGACTTTaGGGCACTCCTCGCACACGG +
Preference number: 4 (lower is better)
Translates to: CDSQMGVPFGIAPTPTSLRSGRL*GTPRTR
Trigger: CCGTGTGCGAGGAGTGCCTCAAAGTCTACCTGAGCG...TAAGCTGGTTGGAGTAGGAGCGATACCAAAGGGTACACCCATCTGTGAGTCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519565.5
ENST00000560949.5
CDS-3UTR CCA 90 bp CTTTGGACACTTCTGGGCATTCCTCTGCCCATGCTCAATTTCGCTGGCCCAGTGCCAAGTCTCACAAGATaGCCTGGAAGGAGGTGCAGA +
Preference number: 4 (lower is better)
Translates to: LWTLLGIPLPMLNFAGPVPSLTR*PGRRCR
Trigger: TCTGCACCTCCTTCCAGGCCATCTTGTGAGACTTGG...CACTGGGCCAGCGAAATTGAGCATGGGCAGAGGAATGCCCAGAAGTGTCCAAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519565.5
CDS-3UTR CCA 90 bp TCAGCTATTAACACCAAGTCTCACAAGATGGCCTGGAAGGAGGTGCAGAGTTCACAGGCCAGAGTAGGGTaGAGCTCCCAACAGGCTGGG +
Preference number: 4 (lower is better)
Translates to: SAINTKSHKMAWKEVQSSQARVG*SSQQAG
Trigger: CCCAGCCTGTTGGGAGCTCCACCCTACTCTGGCCTG...TGAACTCTGCACCTCCTTCCAGGCCATCTTGTGAGACTTGGTGTTAATAGCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560949.5
CDS-3UTR TCA 90 bp TCTGCCCATGCTCAATTTCGCTGGCCCAGTGACGCAACAATTTGTCTCCTTTTTAGCAAGGCAGGGGCTTaGTGGGCTTGTCTTCCAGGC +
Preference number: 4 (lower is better)
Translates to: SAHAQFRWPSDATICLLFSKAGA*WACLPG
Trigger: GCCTGGAAGACAAGCCCATCAAGCCCCTGCCTTGCT...AAAAAGGAGACAAATTGTTGCGTCACTGGGCCAGCGAAATTGAGCATGGGCAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000519565.5
CDS-3UTR GCA 90 bp ACACCAAGTCTCACAAGATGGCCTGGAAGGAGGTGCAGAGTTCAAAGACAGTCCGCATTCCTCTGCCCATaGTCAATTTCGCTGGCCCAG +
Preference number: 4 (lower is better)
Translates to: TPSLTRWPGRRCRVQRQSAFLCP*SISLAQ
Trigger: CTGGGCCAGCGAAATTGAGCATGGGCAGAGGAATGC...GGACTGTCTTTGAACTCTGCACCTCCTTCCAGGCCATCTTGTGAGACTTGGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359704.2
ENST00000368414.6
ENST00000519565.5
ENST00000560949.5
CDS-3UTR GCA 90 bp AAGGAGGTGCAGAGTTCAAAGACAGTCCAAGCAATTCTCAGAAGAGGCGTGCTCGGAAGGAAGAGCGGGTaGTGGGAGGGTTCAACACTG +
Preference number: 4 (lower is better)
Translates to: KEVQSSKTVQAILRRGVLGRKSG*WEGSTL
Trigger: CAGTGTTGAACCCTCCCAGCACCCGCTCTTCCTTCC...GAGCACGCCTCTTCTGAGAATTGCTTGGACTGTCTTTGAACTCTGCACCTCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560949.5
CDS-3UTR CCA 90 bp CTTTGGACACTTCTGGGCATTCCTCTGCCCATGCTCAATTTCGCTGGCCCAGTGACTGAGGACATGGCTTaGTGCTGGAATCAATACGGC +
Preference number: 4 (lower is better)
Translates to: LWTLLGIPLPMLNFAGPVTEDMA*CWNQYG
Trigger: GCCGTATTGATTCCAGCACCAAGCCATGTCCTCAGT...CACTGGGCCAGCGAAATTGAGCATGGGCAGAGGAATGCCCAGAAGTGTCCAAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000432158.6
ENST00000519565.5
CDS-3UTR CCA 90 bp TGCACCATAGCTAGAGGCATTGTGGCCCACGGAGAATCACTGGGAGATGAGATGCCAAGTCTCACAAGATaGCCTGGAAGGAGGTGCAGA +
Preference number: 4 (lower is better)
Translates to: CTIARGIVAHGESLGDEMPSLTR*PGRRCR
Trigger: TCTGCACCTCCTTCCAGGCCATCTTGTGAGACTTGG...CATCTCATCTCCCAGTGATTCTCCGTGGGCCACAATGCCTCTAGCTATGGTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359704.2
ENST00000368414.6
ENST00000519565.5
ENST00000560949.5
CDS-3UTR CCA 90 bp TCTGAAAAGTGGCCTTGCTTGTTGGTACAGATAGGACTTCAGCTATTAACACCAGGCCCGCAGTGCCACTaGCCAGGGTCTGCGACTCCT +
Preference number: 4 (lower is better)
Translates to: SEKWPCLLVQIGLQLLTPGPQCH*PGSATP
Trigger: AGGAGTCGCAGACCCTGGCCAGTGGCACTGCGGGCC...TGGTGTTAATAGCTGAAGTCCTATCTGTACCAACAAGCAAGGCCACTTTTCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560949.5
CDS-3UTR CCA 90 bp AGAATTATACTGCTGGGGCCACAGATTATAATAGGTGCATTCAGTGAACTCTTACCCCCACGCGGGTCCTaGGCTCCAGCTCTTCGCCGG +
Preference number: 4 (lower is better)
Translates to: RIILLGPQIIIGAFSELLPPRGS*APALRR
Trigger: CCGGCGAAGAGCTGGAGCCCAGGACCCGCGTGGGGG...TAAGAGTTCACTGAATGCACCTATTATAATCTGTGGCCCCAGCAGTATAATTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560949.5
CDS-3UTR TCA 90 bp GATGTGACTCACAGATGGGTGTACCCTTTGGTATCGCTCCTACTCCAACCAGCTGTAAAGTGCTTGCACTaGGGACATGGCTTGGTGCTG +
Preference number: 4 (lower is better)
Translates to: DVTHRWVYPLVSLLLQPAVKCLH*GHGLVL
Trigger: CAGCACCAAGCCATGTCCTCAGTGCAAGCACTTTAC...AGCTGGTTGGAGTAGGAGCGATACCAAAGGGTACACCCATCTGTGAGTCACATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359704.2
ENST00000368414.6
ENST00000519565.5
ENST00000560949.5
CDS-3UTR TCA 90 bp AAGGACAGGATACCATGTTGGGAGTGCACCATAGCTAGAGGCATTGTGGCCCACATTTCGCTGGCCCAGTaGCGCAACAATTTGTCTCCT +
Preference number: 4 (lower is better)
Translates to: KDRIPCWECTIARGIVAHISLAQ*RNNLSP
Trigger: AGGAGACAAATTGTTGCGTCACTGGGCCAGCGAAAT...GTGGGCCACAATGCCTCTAGCTATGGTGCACTCCCAACATGGTATCCTGTCCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359704.2
ENST00000368414.6
ENST00000519565.5
ENST00000560949.5
CDS-3UTR TCA 90 bp TTTTCAAGATGTGACTCACAGATGGGTGTACCCTTTGGTATCGCTCCTACTCCAAGCAAGGCAGGGGCTTaGTGGGCTTGTCTTCCAGGC +
Preference number: 4 (lower is better)
Translates to: FSRCDSQMGVPFGIAPTPSKAGA*WACLPG
Trigger: GCCTGGAAGACAAGCCCATCAAGCCCCTGCCTTGCT...TGGAGTAGGAGCGATACCAAAGGGTACACCCATCTGTGAGTCACATCTTGAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519565.5
ENST00000560949.5
CDS-3UTR TCA 90 bp ACAGATAGGACTTCAGCTATTAACACCAAGTCTCACAAGATGGCCTGGAAGGAGCGCTCAGGTAGACTTTaGGGCACTCCTCGCACACGG +
Preference number: 4 (lower is better)
Translates to: TDRTSAINTKSHKMAWKERSGRL*GTPRTR
Trigger: CCGTGTGCGAGGAGTGCCTCAAAGTCTACCTGAGCG...CTCCTTCCAGGCCATCTTGTGAGACTTGGTGTTAATAGCTGAAGTCCTATCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519565.5
ENST00000560949.5
CDS-3UTR TCA 90 bp ATACCATGTTGGGAGTGCACCATAGCTAGAGGCATTGTGGCCCACGGAGAATCATCCCACATACCAGAGTaGGTTTTTAGGCCCCTCCTG +
Preference number: 4 (lower is better)
Translates to: IPCWECTIARGIVAHGESSHIPE*VFRPLL
Trigger: CAGGAGGGGCCTAAAAACTCACTCTGGTATGTGGGA...TGATTCTCCGTGGGCCACAATGCCTCTAGCTATGGTGCACTCCCAACATGGTAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000519565.5
CDS-3UTR TCA 90 bp ATACCATGTTGGGAGTGCACCATAGCTAGAGGCATTGTGGCCCACGGAGAATCATTGAGCCCAAGAGTTTaGGACCAGCCTGGGCAACAT +
Preference number: 4 (lower is better)
Translates to: IPCWECTIARGIVAHGESLSPRV*DQPGQH
Trigger: ATGTTGCCCAGGCTGGTCTCAAACTCTTGGGCTCAA...TGATTCTCCGTGGGCCACAATGCCTCTAGCTATGGTGCACTCCCAACATGGTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519565.5
CDS-3UTR GCA 90 bp CTCACAAGATGGCCTGGAAGGAGGTGCAGAGTTCAAAGACAGTCCAAGCAATTCGCATTCCTCTGCCCATaGTCAATTTCGCTGGCCCAG +
Preference number: 4 (lower is better)
Translates to: LTRWPGRRCRVQRQSKQFAFLCP*SISLAQ
Trigger: CTGGGCCAGCGAAATTGAGCATGGGCAGAGGAATGC...GAATTGCTTGGACTGTCTTTGAACTCTGCACCTCCTTCCAGGCCATCTTGTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359704.2
ENST00000368414.6
ENST00000519565.5
ENST00000560949.5
CDS-3UTR GCA 90 bp TCAGCTATTAACACCAAGTCTCACAAGATGGCCTGGAAGGAGGTGCAGAGTTCATCCTCCAGCTCCAACTaGAGTGGCAAGGTCTGGGGA +
Preference number: 4 (lower is better)
Translates to: SAINTKSHKMAWKEVQSSSSSSN*SGKVWG
Trigger: TCCCCAGACCTTGCCACTGCAGTTGGAGCTGGAGGA...TGAACTCTGCACCTCCTTCCAGGCCATCTTGTGAGACTTGGTGTTAATAGCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560949.5
CDS-3UTR GCA 90 bp TTGCTTGTTGGTACAGATAGGACTTCAGCTATTAACACCAAGTCTCACAAGATGACTCCAGCTCGATGCTaGCGCCGTCGGGGGAGAGGG +
Preference number: 4 (lower is better)
Translates to: LLVGTDRTSAINTKSHKMTPARC*RRRGRG
Trigger: CCCTCTCCCCCGACGGCGGCAGCATCGAGCTGGAGT...CATCTTGTGAGACTTGGTGTTAATAGCTGAAGTCCTATCTGTACCAACAAGCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560949.5
CDS-3UTR CCA 90 bp ATGTGGAAAAATAGTGTAGCGGCATGGAACTGGGTAAGTACAAGGTTACTGGGCAGAAGACTTGTCTCTTaGCGAGGGACGGGCGCCGCT +
Preference number: 4 (lower is better)
Translates to: MWKNSVAAWNWVSTRLLGRRLVS*RGTGAA
Trigger: AGCGGCGCCCGTCCCTCGCCAAGAGACAAGTCTTCT...GCCCAGTAACCTTGTACTTACCCAGTTCCATGCCGCTACACTATTTTTCCACAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560949.5
CDS-3UTR TCA 90 bp AAGGACAGGATACCATGTTGGGAGTGCACCATAGCTAGAGGCATTGTGGCCCACCCTTCATCCCTTTCTTaGACTGGTTTATGGGTGTGG +
Preference number: 4 (lower is better)
Translates to: KDRIPCWECTIARGIVAHPSSLS*TGLWVW
Trigger: CCACACCCATAAACCAGTTCAAGAAAGGGATGAAGG...GTGGGCCACAATGCCTCTAGCTATGGTGCACTCCCAACATGGTATCCTGTCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359704.2
CDS-3UTR TCA 90 bp GTCTCACAAGATGGCCTGGAAGGAGGTGCAGAGTTCAAAGACAGTCCAAGCAATTTCGCAGAGAACCAATaGCAGCATAGCTTGCCAGCC +
Preference number: 4 (lower is better)
Translates to: VSQDGLEGGAEFKDSPSNFAENQ*QHSLPA
Trigger: GGCTGGCAAGCTATGCTGTCATTGGTTCTCTGCGAA...ATTGCTTGGACTGTCTTTGAACTCTGCACCTCCTTCCAGGCCATCTTGTGAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519565.5
CDS-3UTR GCA 90 bp GTTACGGGCGAGACAGAATTTATCCCACACTTGGCCAAGATGGGAAGAAGACTGTGGCCTGGAAGGAGGTaGAGAGTTCAAAGACAGTCC +
Preference number: 4 (lower is better)
Translates to: VTGETEFIPHLAKMGRRLWPGRR*RVQRQS
Trigger: GGACTGTCTTTGAACTCTGCACCTCCTTCCAGGCCA...CAGTCTTCTTCCCATCTTGGCCAAGTGTGGGATAAATTCTGTCTCGCCCGTAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519565.5
CDS-3UTR GCA 90 bp TGCTTGTTGGTACAGATAGGACTTCAGCTATTAACACCAAGTCTCACAAGATGGAGAACTCCAGCTCGATaGTGCCGCCGTCGGGGGAGA +
Preference number: 4 (lower is better)
Translates to: CLLVQIGLQLLTPSLTRWRTPAR*CRRRGR
Trigger: TCTCCCCCGACGGCGGCAGCATCGAGCTGGAGTTCT...CCATCTTGTGAGACTTGGTGTTAATAGCTGAAGTCCTATCTGTACCAACAAGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560949.5
CDS-3UTR CCA 90 bp TGCACCATAGCTAGAGGCATTGTGGCCCACGGAGAATCACTGGGAGATGAGATGCTTGCACTGAGGACATaGCTTGGTGCTGGAATCAAT +
Preference number: 4 (lower is better)
Translates to: CTIARGIVAHGESLGDEMLALRT*LGAGIN
Trigger: ATTGATTCCAGCACCAAGCCATGTCCTCAGTGCAAG...CATCTCATCTCCCAGTGATTCTCCGTGGGCCACAATGCCTCTAGCTATGGTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359704.2
ENST00000368414.6
ENST00000519565.5
ENST00000560949.5
CDS-3UTR CCA 90 bp TGTGACTCACAGATGGGTGTACCCTTTGGTATCGCTCCTACTCCAACCAGCTTACACTTTGGACACTTCTaGGCATTCCTCTGCCCATGC +
Preference number: 4 (lower is better)
Translates to: CDSQMGVPFGIAPTPTSLHFGHF*AFLCPC
Trigger: GCATGGGCAGAGGAATGCCCAGAAGTGTCCAAAGTG...TAAGCTGGTTGGAGTAGGAGCGATACCAAAGGGTACACCCATCTGTGAGTCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359704.2
ENST00000368414.6
ENST00000519565.5
ENST00000560949.5
CDS-3UTR CCA 90 bp TGCACCATAGCTAGAGGCATTGTGGCCCACGGAGAATCACTGGGAGATGAGATGTCAGTTCGCTGGATGTaGATCTTGCACTTTGGACAC +
Preference number: 4 (lower is better)
Translates to: CTIARGIVAHGESLGDEMSVRWM*ILHFGH
Trigger: GTGTCCAAAGTGCAAGATCCACATCCAGCGAACTGA...CATCTCATCTCCCAGTGATTCTCCGTGGGCCACAATGCCTCTAGCTATGGTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359704.2
ENST00000368414.6
ENST00000519565.5
ENST00000560949.5
CDS-3UTR CCA 90 bp TGCACCATAGCTAGAGGCATTGTGGCCCACGGAGAATCACTGGGAGATGAGATGTGTGAGCAGGTCATATaGTCACATCCTTCAGTTCGC +
Preference number: 4 (lower is better)
Translates to: CTIARGIVAHGESLGDEMCEQVI*SHPSVR
Trigger: GCGAACTGAAGGATGTGACCATATGACCTGCTCACA...CATCTCATCTCCCAGTGATTCTCCGTGGGCCACAATGCCTCTAGCTATGGTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359704.2
ENST00000368414.6
ENST00000519565.5
ENST00000560949.5
CDS-3UTR CCA 90 bp TGTGACTCACAGATGGGTGTACCCTTTGGTATCGCTCCTACTCCAACCAGCTTACGATTACAACCGCTATaGCCCCTAGTGCCAATCCCA +
Preference number: 4 (lower is better)
Translates to: CDSQMGVPFGIAPTPTSLRLQPL*PLVPIP
Trigger: TGGGATTGGCACTAGGGGCCATAGCGGTTGTAATCG...TAAGCTGGTTGGAGTAGGAGCGATACCAAAGGGTACACCCATCTGTGAGTCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359704.2
ENST00000368414.6
ENST00000519565.5
ENST00000560949.5
CDS-3UTR CCA 90 bp GTCTCACAAGATGGCCTGGAAGGAGGTGCAGAGTTCAAAGACAGTCCAAGCAATCCAAGTCTCACAAGATaGCCTGGAAGGAGGTGCAGA +
Preference number: 4 (lower is better)
Translates to: VSQDGLEGGAEFKDSPSNPSLTR*PGRRCR
Trigger: TCTGCACCTCCTTCCAGGCCATCTTGTGAGACTTGG...ATTGCTTGGACTGTCTTTGAACTCTGCACCTCCTTCCAGGCCATCTTGTGAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359704.2
ENST00000368414.6
ENST00000519565.5
ENST00000560949.5
CDS-3UTR CCA 90 bp CTCCCAAAAGTTACTACTACTGTTTTACCTTCAAAGTTGGCACTGACATATAAACGGGCTCTGGGGCGCTaGTGTCCGCGCAGCCCCAGT +
Preference number: 4 (lower is better)
Translates to: LPKVTTTVLPSKLALTYKRALGR*CPRSPS
Trigger: ACTGGGGCTGCGCGGACACCAGCGCCCCAGAGCCCG...TTTATATGTCAGTGCCAACTTTGAAGGTAAAACAGTAGTAGTAACTTTTGGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000560949.5
CDS-3UTR TCA 90 bp TCTGCCCATGCTCAATTTCGCTGGCCCAGTGACGCAACAATTTGTCTCCTTTTTGTAAAGTGCTTGCACTaGGGACATGGCTTGGTGCTG +
Preference number: 4 (lower is better)
Translates to: SAHAQFRWPSDATICLLFVKCLH*GHGLVL
Trigger: CAGCACCAAGCCATGTCCTCAGTGCAAGCACTTTAC...AAAAAGGAGACAAATTGTTGCGTCACTGGGCCAGCGAAATTGAGCATGGGCAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000432158.6
ENST00000519565.5
CDS-3UTR TCA 90 bp AAGGAGGTGCAGAGTTCAAAGACAGTCCAAGCAATTCTCAGAAGAGGCGTGCTCATTTCGCTGGCCCAGTaGCGCAACAATTTGTCTCCT +
Preference number: 4 (lower is better)
Translates to: KEVQSSKTVQAILRRGVLISLAQ*RNNLSP
Trigger: AGGAGACAAATTGTTGCGTCACTGGGCCAGCGAAAT...GAGCACGCCTCTTCTGAGAATTGCTTGGACTGTCTTTGAACTCTGCACCTCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359704.2
ENST00000368414.6
ENST00000519565.5
ENST00000560949.5
CDS-3UTR TCA 90 bp AAGGACAGGATACCATGTTGGGAGTGCACCATAGCTAGAGGCATTGTGGCCCACACCAGCTTAGCTGGATaGAATCATCTGCATGTTACC +
Preference number: 4 (lower is better)
Translates to: KDRIPCWECTIARGIVAHTSLAG*NHLHVT
Trigger: GGTAACATGCAGATGATTTCATCCAGCTAAGCTGGT...GTGGGCCACAATGCCTCTAGCTATGGTGCACTCCCAACATGGTATCCTGTCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359704.2
ENST00000368414.6
ENST00000519565.5
ENST00000560949.5
CDS-3UTR TCA 90 bp TGCCATACTGTGGCCATGAATCTCACGATTGGTTGGCTGGGGTATCCATGTCAGACTCCAAACAGCCTTTaGAACCACTTCATCCTGCCA +
Preference number: 4 (lower is better)
Translates to: CHTVAMNLTIGWLGYPCQTPNSL*NHFILP
Trigger: TGGCAGGATGAAGTGGTTTCAAAGGCTGTTTGGAGT...CTGACATGGATACCCCAGCCAACCAATCGTGAGATTCATGGCCACAGTATGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432158.6
CDS-3UTR TCA 90 bp CACCAGACGAATTGGCAGGTAGGGCACTGGATCTGTTCATCACAAAGAACAAAGGCCATACTGTGGCCATaGATCTCACGATTGGTTGGC +
Preference number: 4 (lower is better)
Translates to: HQTNWQVGHWICSSQRTKAILWP*ISRLVG
Trigger: GCCAACCAATCGTGAGATTCATGGCCACAGTATGGC...CTTTGTTCTTTGTGATGAACAGATCCAGTGCCCTACCTGCCAATTCGTCTGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432158.6
CDS-3UTR GCA 90 bp GTCTCACAAGATGGCCTGGAAGGAGGTGCAGAGTTCAAAGACAGTCCAAGCAATGAGGACATGGCTTGGTaGTGGAATCAATACGGCCAA +
Preference number: 4 (lower is better)
Translates to: VSQDGLEGGAEFKDSPSNEDMAW*WNQYGQ
Trigger: TTGGCCGTATTGATTCCAGCACCAAGCCATGTCCTC...ATTGCTTGGACTGTCTTTGAACTCTGCACCTCCTTCCAGGCCATCTTGTGAGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359704.2
ENST00000368414.6
ENST00000519565.5
ENST00000560949.5
CDS-3UTR GCA 90 bp CTCACAAGATGGCCTGGAAGGAGGTGCAGAGTTCAAAGACAGTCCAAGCAATTCTTCTGGGCATTCCTCTaGCCATGCTCAATTTCGCTG +
Preference number: 4 (lower is better)
Translates to: LTRWPGRRCRVQRQSKQFFWAFL*PCSISL
Trigger: CAGCGAAATTGAGCATGGGCAGAGGAATGCCCAGAA...GAATTGCTTGGACTGTCTTTGAACTCTGCACCTCCTTCCAGGCCATCTTGTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359704.2
ENST00000368414.6
ENST00000519565.5
ENST00000560949.5
CDS-3UTR GCA 90 bp TGCACCATAGCTAGAGGCATTGTGGCCCACGGAGAATCACTGGGAGATGAGATGATACCATGTTGGGAGTaGACCATAGCTAGAGGCATT +
Preference number: 4 (lower is better)
Translates to: CTIARGIVAHGESLGDEMIPCWE*TIARGI
Trigger: AATGCCTCTAGCTATGGTGCACTCCCAACATGGTAT...CATCTCATCTCCCAGTGATTCTCCGTGGGCCACAATGCCTCTAGCTATGGTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359704.2
ENST00000368414.6
ENST00000519565.5
ENST00000560949.5
CDS-3UTR GCA 90 bp CTTCAGCTATTAACACCAAGTCTCACAAGATGGCCTGGAAGGAGGTGCAGAGTTTGGCCTGGAAGGAGGTaGAGAGTTCAAAGACAGTCC +
Preference number: 4 (lower is better)
Translates to: LQLLTPSLTRWPGRRCRVWPGRR*RVQRQS
Trigger: GGACTGTCTTTGAACTCTGCACCTCCTTCCAGGCCA...AACTCTGCACCTCCTTCCAGGCCATCTTGTGAGACTTGGTGTTAATAGCTGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359704.2
ENST00000368414.6
ENST00000519565.5
ENST00000560949.5
CDS-3UTR CCA 90 bp TGCACCATAGCTAGAGGCATTGTGGCCCACGGAGAATCACTGGGAGATGAGATGCTCAAGTGCTGGCAATaGACACTGTATATGCTTCAG +
Preference number: 4 (lower is better)
Translates to: CTIARGIVAHGESLGDEMLKCWQ*TLYMLQ
Trigger: CTGAAGCATATACAGTGTCCATTGCCAGCACTTGAG...CATCTCATCTCCCAGTGATTCTCCGTGGGCCACAATGCCTCTAGCTATGGTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359704.2
CDS-3UTR CCA 90 bp CACCAAGTCTCACAAGATGGCCTGGAAGGAGGTGCAGAGTTCAAAGACAGTCCACTTGCACTGAGGACATaGCTTGGTGCTGGAATCAAT +
Preference number: 4 (lower is better)
Translates to: HQVSQDGLEGGAEFKDSPLALRT*LGAGIN
Trigger: ATTGATTCCAGCACCAAGCCATGTCCTCAGTGCAAG...TGGACTGTCTTTGAACTCTGCACCTCCTTCCAGGCCATCTTGTGAGACTTGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359704.2
ENST00000368414.6
ENST00000519565.5
ENST00000560949.5
CDS-3UTR CCA 90 bp GGAGAGTGGCACTTAAAACACCAGACGAATTGGCAGGTAGGGCACTGGATCTGTCTTGCACTGAGGACATaGCTTGGTGCTGGAATCAAT +
Preference number: 4 (lower is better)
Translates to: GEWHLKHQTNWQVGHWICLALRT*LGAGIN
Trigger: ATTGATTCCAGCACCAAGCCATGTCCTCAGTGCAAG...ACAGATCCAGTGCCCTACCTGCCAATTCGTCTGGTGTTTTAAGTGCCACTCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432158.6
CDS-3UTR CCA 90 bp GATCTTAGTCTCAGTACAGGGTGCCATACTGTGGCCATGAATCTCACGATTGGTCACTTTGGACACTTCTaGGCATTCCTCTGCCCATGC +
Preference number: 4 (lower is better)
Translates to: DLSLSTGCHTVAMNLTIGHFGHF*AFLCPC
Trigger: GCATGGGCAGAGGAATGCCCAGAAGTGTCCAAAGTG...ACCAATCGTGAGATTCATGGCCACAGTATGGCACCCTGTACTGAGACTAAGATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432158.6
CDS-3UTR CCA 90 bp TCTGCCCATGCTCAATTTCGCTGGCCCAGTGACGCAACAATTTGTCTCCTTTTTCACTTTGGACACTTCTaGGCATTCCTCTGCCCATGC +
Preference number: 4 (lower is better)
Translates to: SAHAQFRWPSDATICLLFHFGHF*AFLCPC
Trigger: GCATGGGCAGAGGAATGCCCAGAAGTGTCCAAAGTG...AAAAAGGAGACAAATTGTTGCGTCACTGGGCCAGCGAAATTGAGCATGGGCAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000432158.6
ENST00000519565.5
CDS-3UTR CCA 90 bp GGTGCAGAGTTCAAAGACAGTCCAAGCAATTCTCAGAAGAGGCGTGCTCAGAATCGATTACAACCGCTATaGCCCCTAGTGCCAATCCCA +
Preference number: 4 (lower is better)
Translates to: GAEFKDSPSNSQKRRAQNRLQPL*PLVPIP
Trigger: TGGGATTGGCACTAGGGGCCATAGCGGTTGTAATCG...ATTCTGAGCACGCCTCTTCTGAGAATTGCTTGGACTGTCTTTGAACTCTGCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359704.2
ENST00000368414.6
ENST00000519565.5
ENST00000560949.5
CDS-3UTR CCA 90 bp AGACTGACCCTCGCACTAATCTCCTTAAATGAGGTCTCTCTGGGAGGTAGCGATGATGGGTGTACCCTTTaGTATCGCTCCTACTCCAAC +
Preference number: 4 (lower is better)
Translates to: RLTLALISLNEVSLGGSDDGCTL*YRSYSN
Trigger: GTTGGAGTAGGAGCGATACCAAAGGGTACACCCATC...ATCGCTACCTCCCAGAGAGACCTCATTTAAGGAGATTAGTGCGAGGGTCAGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519565.5
CDS-3UTR CCA 90 bp ATACCATGTTGGGAGTGCACCATAGCTAGAGGCATTGTGGCCCACGGAGAATCAGATGTGACTCACAGATaGGTGTACCCTTTGGTATCG +
Preference number: 4 (lower is better)
Translates to: IPCWECTIARGIVAHGESDVTHR*VYPLVS
Trigger: CGATACCAAAGGGTACACCCATCTGTGAGTCACATC...TGATTCTCCGTGGGCCACAATGCCTCTAGCTATGGTGCACTCCCAACATGGTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359704.2
ENST00000368414.6
ENST00000519565.5
ENST00000560949.5
CDS-3UTR CCA 90 bp ATGTGGAAAAATAGTGTAGCGGCATGGAACTGGGTAAGTACAAGGTTACTGGGCCAGCTCCAACTGCAGTaGCAAGGTCTGGGGATTGAG +
Preference number: 4 (lower is better)
Translates to: MWKNSVAAWNWVSTRLLGQLQLQ*QGLGIE
Trigger: CTCAATCCCCAGACCTTGCCACTGCAGTTGGAGCTG...GCCCAGTAACCTTGTACTTACCCAGTTCCATGCCGCTACACTATTTTTCCACAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560949.5
CDS-3UTR TCA 90 bp GCAGCAATTTGTTTAGGGAAAGGACAGGATACCATGTTGGGAGTGCACCATAGCATTTCGCTGGCCCAGTaGCGCAACAATTTGTCTCCT +
Preference number: 4 (lower is better)
Translates to: AAICLGKGQDTMLGVHHSISLAQ*RNNLSP
Trigger: AGGAGACAAATTGTTGCGTCACTGGGCCAGCGAAAT...GCTATGGTGCACTCCCAACATGGTATCCTGTCCTTTCCCTAAACAAATTGCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359704.2
ENST00000368414.6
ENST00000519565.5
ENST00000560949.5
CDS-3UTR TCA 90 bp CTTGCAGTTAACACCTTCATGCCAAGGAGAGTGGCACTTAAAACACCAGACGAATGGGGCATGGCGAAGTaGACACATCACAGATTCGCA +
Preference number: 4 (lower is better)
Translates to: LAVNTFMPRRVALKTPDEWGMAK*THHRFA
Trigger: TGCGAATCTGTGATGTGTTCACTTCGCCATGCCCCA...TTCGTCTGGTGTTTTAAGTGCCACTCTCCTTGGCATGAAGGTGTTAACTGCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519565.5
CDS-3UTR GCA 90 bp AAGAACAAAGATCTTAGTCTCAGTACAGGGTGCCATACTGTGGCCATGAATCTCGCATTCCTCTGCCCATaGTCAATTTCGCTGGCCCAG +
Preference number: 4 (lower is better)
Translates to: KNKDLSLSTGCHTVAMNLAFLCP*SISLAQ
Trigger: CTGGGCCAGCGAAATTGAGCATGGGCAGAGGAATGC...GAGATTCATGGCCACAGTATGGCACCCTGTACTGAGACTAAGATCTTTGTTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432158.6
CDS-3UTR CCA 90 bp CTCACAAGATGGCCTGGAAGGAGGTGCAGAGTTCAAAGACAGTCCAAGCAATTCCATGCTCAATTTCGCTaGCCCAGTGACGCAACAATT +
Preference number: 4 (lower is better)
Translates to: LTRWPGRRCRVQRQSKQFHAQFR*PSDATI
Trigger: AATTGTTGCGTCACTGGGCCAGCGAAATTGAGCATG...GAATTGCTTGGACTGTCTTTGAACTCTGCACCTCCTTCCAGGCCATCTTGTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359704.2
ENST00000368414.6
ENST00000519565.5
ENST00000560949.5
CDS-3UTR CCA 90 bp ATTAACACCAAGTCTCACAAGATGGCCTGGAAGGAGGTGCAGAGTTCAAAGACACACTTTGGACACTTCTaGGCATTCCTCTGCCCATGC +
Preference number: 4 (lower is better)
Translates to: INTKSHKMAWKEVQSSKTHFGHF*AFLCPC
Trigger: GCATGGGCAGAGGAATGCCCAGAAGTGTCCAAAGTG...TGTCTTTGAACTCTGCACCTCCTTCCAGGCCATCTTGTGAGACTTGGTGTTAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359704.2
ENST00000368414.6
ENST00000519565.5
ENST00000560949.5
CDS-3UTR CCA 90 bp ACAGATAGGACTTCAGCTATTAACACCAAGTCTCACAAGATGGCCTGGAAGGAGCACTTTGGACACTTCTaGGCATTCCTCTGCCCATGC +
Preference number: 4 (lower is better)
Translates to: TDRTSAINTKSHKMAWKEHFGHF*AFLCPC
Trigger: GCATGGGCAGAGGAATGCCCAGAAGTGTCCAAAGTG...CTCCTTCCAGGCCATCTTGTGAGACTTGGTGTTAATAGCTGAAGTCCTATCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359704.2
ENST00000368414.6
ENST00000519565.5
ENST00000560949.5
CDS-3UTR CCA 90 bp ATACCATGTTGGGAGTGCACCATAGCTAGAGGCATTGTGGCCCACGGAGAATCACATCCTTCAGTTCGCTaGATGTGGATCTTGCACTTT +
Preference number: 4 (lower is better)
Translates to: IPCWECTIARGIVAHGESHPSVR*MWILHF
Trigger: AAAGTGCAAGATCCACATCCAGCGAACTGAAGGATG...TGATTCTCCGTGGGCCACAATGCCTCTAGCTATGGTGCACTCCCAACATGGTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359704.2
ENST00000368414.6
ENST00000519565.5
ENST00000560949.5
CDS-3UTR CCA 90 bp ACCAAGTCTCACAAGATGGCCTGGAAGGAGGTGCAGAGTTCAAAGACAGTCCAATGTGAGCAGGTCATATaGTCACATCCTTCAGTTCGC +
Preference number: 4 (lower is better)
Translates to: TKSHKMAWKEVQSSKTVQCEQVI*SHPSVR
Trigger: GCGAACTGAAGGATGTGACCATATGACCTGCTCACA...TTGGACTGTCTTTGAACTCTGCACCTCCTTCCAGGCCATCTTGTGAGACTTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359704.2
ENST00000368414.6
ENST00000519565.5
ENST00000560949.5
CDS-3UTR CCA 90 bp GCAGAGTTCAAAGACAGTCCAAGCAATTCTCAGAAGAGGCGTGCTCAGAATTCTCGATTACAACCGCTATaGCCCCTAGTGCCAATCCCA +
Preference number: 4 (lower is better)
Translates to: AEFKDSPSNSQKRRAQNSRLQPL*PLVPIP
Trigger: TGGGATTGGCACTAGGGGCCATAGCGGTTGTAATCG...AGAATTCTGAGCACGCCTCTTCTGAGAATTGCTTGGACTGTCTTTGAACTCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359704.2
ENST00000368414.6
ENST00000519565.5
ENST00000560949.5
CDS-3UTR CCA 90 bp GCAGCAATTTGTTTAGGGAAAGGACAGGATACCATGTTGGGAGTGCACCATAGCGATGGGTGTACCCTTTaGTATCGCTCCTACTCCAAC +
Preference number: 4 (lower is better)
Translates to: AAICLGKGQDTMLGVHHSDGCTL*YRSYSN
Trigger: GTTGGAGTAGGAGCGATACCAAAGGGTACACCCATC...GCTATGGTGCACTCCCAACATGGTATCCTGTCCTTTCCCTAAACAAATTGCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359704.2
ENST00000368414.6
ENST00000519565.5
ENST00000560949.5
3UTR CAA 72 bp ATGCCAAGGAGAGTGGCACTTAAAACACCAGACGAATaGGCAGGTAGGGCACTGGATCTGTTCATCACAAAG +
Preference number: 4 (lower is better)
Translates to: MPRRVALKTPDE*AGRALDLFITK
Trigger: CTTTGTGATGAACAGATCCAGTGCCCTACCTGCCAATTCGTCTGGTGTTTTAAGTGCCACTCTCCTTGGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432158.6
CDS-3UTR TCA 90 bp AGGAGAGTGGCACTTAAAACACCAGACGAATTGGCAGGTAGGGCACTGGATCTGTTTGTATTTGCTTTCTaGTCTGGAAGGGGTGGGAAT +
Preference number: 4 (lower is better)
Translates to: RRVALKTPDELAGRALDLFVFAF*SGRGGN
Trigger: ATTCCCACCCCTTCCAGATCAGAAAGCAAATACAAA...CAGATCCAGTGCCCTACCTGCCAATTCGTCTGGTGTTTTAAGTGCCACTCTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432158.6
CDS-3UTR TCA 90 bp ATACCATGTTGGGAGTGCACCATAGCTAGAGGCATTGTGGCCCACGGAGAATCATTTGTATTTGCTTTCTaGTCTGGAAGGGGTGGGAAT +
Preference number: 4 (lower is better)
Translates to: IPCWECTIARGIVAHGESFVFAF*SGRGGN
Trigger: ATTCCCACCCCTTCCAGATCAGAAAGCAAATACAAA...TGATTCTCCGTGGGCCACAATGCCTCTAGCTATGGTGCACTCCCAACATGGTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359704.2
ENST00000368414.6
ENST00000519565.5
ENST00000560949.5
CDS-3UTR TCA 90 bp ACCAAGTCTCACAAGATGGCCTGGAAGGAGGTGCAGAGTTCAAAGACAGTCCAAGCCAAATGTTGGGTTTaGTTCCTGGTTCTACCACTT +
Preference number: 4 (lower is better)
Translates to: TKSHKMAWKEVQSSKTVQAKCWV*FLVLPL
Trigger: AAGTGGTAGAACCAGGAATCAAACCCAACATTTGGC...TTGGACTGTCTTTGAACTCTGCACCTCCTTCCAGGCCATCTTGTGAGACTTGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359704.2
ENST00000560949.5
CDS-3UTR TCA 90 bp AAGGACAGGATACCATGTTGGGAGTGCACCATAGCTAGAGGCATTGTGGCCCACAGAAATAAAAATCCCTaGGTAGGCCAAAGACAACAG +
Preference number: 4 (lower is better)
Translates to: KDRIPCWECTIARGIVAHRNKNP*VGQRQQ
Trigger: CTGTTGTCTTTGGCCTACTCAGGGATTTTTATTTCT...GTGGGCCACAATGCCTCTAGCTATGGTGCACTCCCAACATGGTATCCTGTCCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000519565.5
ENST00000560949.5
CDS-3UTR TCA 90 bp GTTACGGGCGAGACAGAATTTATCCCACACTTGGCCAAGATGGGAAGAAGACTGTTGTACCAAAAGGTTTaGCCCCTCTCTTCTTACTCC +
Preference number: 4 (lower is better)
Translates to: VTGETEFIPHLAKMGRRLLYQKV*PLSSYS
Trigger: GGAGTAAGAAGAGAGGGGTCAAACCTTTTGGTACAA...CAGTCTTCTTCCCATCTTGGCCAAGTGTGGGATAAATTCTGTCTCGCCCGTAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519565.5
CDS-3UTR TCA 90 bp AACAAGATGTTGCTTGTACCAAAAGGTTTGACCCCTCTCTTCTTACTCCACATAGGAGGGAGGATCGCTTaGGCCCAAGAGTTTGAGACC +
Preference number: 4 (lower is better)
Translates to: NKMLLVPKGLTPLFLLHIGGRIA*AQEFET
Trigger: GGTCTCAAACTCTTGGGCTCAAGCGATCCTCCCTCC...TATGTGGAGTAAGAAGAGAGGGGTCAAACCTTTTGGTACAAGCAACATCTTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519565.5
CDS-3UTR TCA 90 bp GCAGAGTTCAAAGACAGTCCAAGCAATTCTCAGAAGAGGCGTGCTCAGAATTCTTGGGGTCAGGTTGGATaGATGTCCACACATGCTTTC +
Preference number: 4 (lower is better)
Translates to: AEFKDSPSNSQKRRAQNSWGQVG*MSTHAF
Trigger: GAAAGCATGTGTGGACATTCATCCAACCTGACCCCA...AGAATTCTGAGCACGCCTCTTCTGAGAATTGCTTGGACTGTCTTTGAACTCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519565.5
CDS-3UTR TCA 90 bp TGTGACTCACAGATGGGTGTACCCTTTGGTATCGCTCCTACTCCAACCAGCTTATTTTTGGATGGAGAATaGATGACCTGGGGTCAGGTT +
Preference number: 4 (lower is better)
Translates to: CDSQMGVPFGIAPTPTSLFLDGE*MTWGQV
Trigger: AACCTGACCCCAGGTCATTCATTCTCCATCCAAAAA...TAAGCTGGTTGGAGTAGGAGCGATACCAAAGGGTACACCCATCTGTGAGTCACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000519565.5
CDS-3UTR GCA 90 bp TGCACCATAGCTAGAGGCATTGTGGCCCACGGAGAATCACTGGGAGATGAGATGCCTCATTATGAAGTTTaGCTTCAAGAGCCAATGTCA +
Preference number: 4 (lower is better)
Translates to: CTIARGIVAHGESLGDEMPHYEV*LQEPMS
Trigger: TGACATTGGCTCTTGAAGGCAAACTTCATAATGAGG...CATCTCATCTCCCAGTGATTCTCCGTGGGCCACAATGCCTCTAGCTATGGTGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359704.2
ENST00000368414.6
CDS-3UTR GCA 90 bp CTTGCAGTTAACACCTTCATGCCAAGGAGAGTGGCACTTAAAACACCAGACGAATTCTGGGCATTCCTCTaGCCATGCTCAATTTCGCTG +
Preference number: 4 (lower is better)
Translates to: LAVNTFMPRRVALKTPDEFWAFL*PCSISL
Trigger: CAGCGAAATTGAGCATGGGCAGAGGAATGCCCAGAA...TTCGTCTGGTGTTTTAAGTGCCACTCTCCTTGGCATGAAGGTGTTAACTGCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000432158.6
ENST00000519565.5
CDS-3UTR GCA 90 bp TTTTCAAGATGTGACTCACAGATGGGTGTACCCTTTGGTATCGCTCCTACTCCAGCTGGATGTGGATCTTaGACTTTGGACACTTCTGGG +
Preference number: 4 (lower is better)
Translates to: FSRCDSQMGVPFGIAPTPAGCGS*TLDTSG
Trigger: CCCAGAAGTGTCCAAAGTGCAAGATCCACATCCAGC...TGGAGTAGGAGCGATACCAAAGGGTACACCCATCTGTGAGTCACATCTTGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359704.2
ENST00000368414.6
ENST00000519565.5
ENST00000560949.5
CDS-3UTR GCA 90 bp GCAGCAATTTGTTTAGGGAAAGGACAGGATACCATGTTGGGAGTGCACCATAGCTCTGCATGTTACCAGTaGATACCTGTCCGTGATCGT +
Preference number: 4 (lower is better)
Translates to: AAICLGKGQDTMLGVHHSSACYQ*IPVRDR
Trigger: ACGATCACGGACAGGTATGCACTGGTAACATGCAGA...GCTATGGTGCACTCCCAACATGGTATCCTGTCCTTTCCCTAAACAAATTGCTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359704.2
ENST00000368414.6
ENST00000519565.5
ENST00000560949.5
CDS-3UTR GCA 90 bp TTGGTACAGATAGGACTTCAGCTATTAACACCAAGTCTCACAAGATGGCCTGGATGGCCTGGAAGGAGGTaGAGAGTTCAAAGACAGTCC +
Preference number: 4 (lower is better)
Translates to: LVQIGLQLLTPSLTRWPGWPGRR*RVQRQS
Trigger: GGACTGTCTTTGAACTCTGCACCTCCTTCCAGGCCA...TCCAGGCCATCTTGTGAGACTTGGTGTTAATAGCTGAAGTCCTATCTGTACCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359704.2
ENST00000368414.6
ENST00000519565.5
ENST00000560949.5
CDS-3UTR GCA 90 bp GTGTTACATTGTGAGCAGGTCATATGGTCACATCCTTCAGTTCGCTGGATGTGGAGTCTCAGTACAGGGTaGCATACTGTGGCCATGAAT +
Preference number: 4 (lower is better)
Translates to: VLHCEQVIWSHPSVRWMWSLSTG*HTVAMN
Trigger: ATTCATGGCCACAGTATGGCACCCTGTACTGAGACT...CCACATCCAGCGAACTGAAGGATGTGACCATATGACCTGCTCACAATGTAACAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432158.6
CDS-3UTR CCA 90 bp AACACCTTCATGCCAAGGAGAGTGGCACTTAAAACACCAGACGAATTGGCAGGTGACATGGCTTGGTGCTaGAATCAATACGGCCAAGTT +
Preference number: 4 (lower is better)
Translates to: NTFMPRRVALKTPDELAGDMAWC*NQYGQV
Trigger: AACTTGGCCGTATTGATTCCAGCACCAAGCCATGTC...ACCTGCCAATTCGTCTGGTGTTTTAAGTGCCACTCTCCTTGGCATGAAGGTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000432158.6
ENST00000519565.5
CDS-3UTR CCA 90 bp TCCAACCAGCTTAGCTGGATGAAATCATCTGCATGTTACCAGTGCATACCTGTCACTGAGGACATGGCTTaGTGCTGGAATCAATACGGC +
Preference number: 4 (lower is better)
Translates to: SNQLSWMKSSACYQCIPVTEDMA*CWNQYG
Trigger: GCCGTATTGATTCCAGCACCAAGCCATGTCCTCAGT...GACAGGTATGCACTGGTAACATGCAGATGATTTCATCCAGCTAAGCTGGTTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359704.2
ENST00000519565.5
ENST00000560949.5
CDS-3UTR CCA 90 bp CTTGCAGTTAACACCTTCATGCCAAGGAGAGTGGCACTTAAAACACCAGACGAAACTGAGGACATGGCTTaGTGCTGGAATCAATACGGC +
Preference number: 4 (lower is better)
Translates to: LAVNTFMPRRVALKTPDETEDMA*CWNQYG
Trigger: GCCGTATTGATTCCAGCACCAAGCCATGTCCTCAGT...TTCGTCTGGTGTTTTAAGTGCCACTCTCCTTGGCATGAAGGTGTTAACTGCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000432158.6
ENST00000519565.5
CDS-3UTR CCA 90 bp GTCTCACAAGATGGCCTGGAAGGAGGTGCAGAGTTCAAAGACAGTCCAAGCAATCATCCTTCAGTTCGCTaGATGTGGATCTTGCACTTT +
Preference number: 4 (lower is better)
Translates to: VSQDGLEGGAEFKDSPSNHPSVR*MWILHF
Trigger: AAAGTGCAAGATCCACATCCAGCGAACTGAAGGATG...ATTGCTTGGACTGTCTTTGAACTCTGCACCTCCTTCCAGGCCATCTTGTGAGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359704.2
ENST00000368414.6
ENST00000519565.5
ENST00000560949.5
CDS-3UTR CCA 90 bp ATACCATGTTGGGAGTGCACCATAGCTAGAGGCATTGTGGCCCACGGAGAATCATCCAACCAGCTTAGCTaGATGAAATCATCTGCATGT +
Preference number: 4 (lower is better)
Translates to: IPCWECTIARGIVAHGESSNQLS*MKSSAC
Trigger: ACATGCAGATGATTTCATCCAGCTAAGCTGGTTGGA...TGATTCTCCGTGGGCCACAATGCCTCTAGCTATGGTGCACTCCCAACATGGTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359704.2
ENST00000368414.6
ENST00000519565.5
ENST00000560949.5
CDS-3UTR CCA 90 bp CTATTAACACCAAGTCTCACAAGATGGCCTGGAAGGAGGTGCAGAGTTCAAAGAGATGGGTGTACCCTTTaGTATCGCTCCTACTCCAAC +
Preference number: 4 (lower is better)
Translates to: LLTPSLTRWPGRRCRVQRDGCTL*YRSYSN
Trigger: GTTGGAGTAGGAGCGATACCAAAGGGTACACCCATC...TCTTTGAACTCTGCACCTCCTTCCAGGCCATCTTGTGAGACTTGGTGTTAATAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359704.2
ENST00000368414.6
ENST00000519565.5
ENST00000560949.5
CDS-3UTR CCA 90 bp ATTAACACCAAGTCTCACAAGATGGCCTGGAAGGAGGTGCAGAGTTCAAAGACAGATGGGTGTACCCTTTaGTATCGCTCCTACTCCAAC +
Preference number: 4 (lower is better)
Translates to: INTKSHKMAWKEVQSSKTDGCTL*YRSYSN
Trigger: GTTGGAGTAGGAGCGATACCAAAGGGTACACCCATC...TGTCTTTGAACTCTGCACCTCCTTCCAGGCCATCTTGTGAGACTTGGTGTTAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359704.2
ENST00000368414.6
ENST00000519565.5
ENST00000560949.5
CDS-3UTR CCA 90 bp CTTCAGCTATTAACACCAAGTCTCACAAGATGGCCTGGAAGGAGGTGCAGAGTTGATGTGACTCACAGATaGGTGTACCCTTTGGTATCG +
Preference number: 4 (lower is better)
Translates to: LQLLTPSLTRWPGRRCRVDVTHR*VYPLVS
Trigger: CGATACCAAAGGGTACACCCATCTGTGAGTCACATC...AACTCTGCACCTCCTTCCAGGCCATCTTGTGAGACTTGGTGTTAATAGCTGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359704.2
ENST00000368414.6
ENST00000519565.5
ENST00000560949.5
CDS-3UTR CCA 90 bp CTTCAGCTATTAACACCAAGTCTCACAAGATGGCCTGGAAGGAGGTGCAGAGTTGTAGCGGCATGGAACTaGGTAAGTACAAGGTTACTG +
Preference number: 4 (lower is better)
Translates to: LQLLTPSLTRWPGRRCRVVAAWN*VSTRLL
Trigger: CAGTAACCTTGTACTTACCCAGTTCCATGCCGCTAC...AACTCTGCACCTCCTTCCAGGCCATCTTGTGAGACTTGGTGTTAATAGCTGAAG
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368414.6
ENST00000519565.5
ENST00000560949.5
CDS-3UTR CCA 90 bp TCAGCTATTAACACCAAGTCTCACAAGATGGCCTGGAAGGAGGTGCAGAGTTCAGTAGCGGCATGGAACTaGGTAAGTACAAGGTTACTG +
Preference number: 4 (lower is better)
Translates to: SAINTKSHKMAWKEVQSSVAAWN*VSTRLL
Trigger: CAGTAACCTTGTACTTACCCAGTTCCATGCCGCTAC...TGAACTCTGCACCTCCTTCCAGGCCATCTTGTGAGACTTGGTGTTAATAGCTGA
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368414.6
ENST00000519565.5
ENST00000560949.5
CDS-3UTR CCA 90 bp AAAACACCAGACGAATTGGCAGGTAGGGCACTGGATCTGTTCATCACAAAGAACTCACGATTGGTTGGCTaGGGTATCCATGTCAGTGCT +
Preference number: 4 (lower is better)
Translates to: KTPDELAGRALDLFITKNSRLVG*GIHVSA
Trigger: AGCACTGACATGGATACCCCAGCCAACCAATCGTGA...GTTCTTTGTGATGAACAGATCCAGTGCCCTACCTGCCAATTCGTCTGGTGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432158.6
CDS-3UTR CCA 90 bp CTATTAACACCAAGTCTCACAAGATGGCCTGGAAGGAGGTGCAGAGTTCAAAGAGCTGGACTGATGTCTTaGCAGATGTGCCCTCATTTG +
Preference number: 4 (lower is better)
Translates to: LLTPSLTRWPGRRCRVQRAGLMS*QMCPHL
Trigger: CAAATGAGGGCACATCTGCCAAGACATCAGTCCAGC...TCTTTGAACTCTGCACCTCCTTCCAGGCCATCTTGTGAGACTTGGTGTTAATAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519565.5
CDS-3UTR CCA 90 bp TCAGCTATTAACACCAAGTCTCACAAGATGGCCTGGAAGGAGGTGCAGAGTTCAGCAGGACCTACCTGTTaGCAGGAAGATTCTTTTCCT +
Preference number: 4 (lower is better)
Translates to: SAINTKSHKMAWKEVQSSAGPTC*QEDSFP
Trigger: AGGAAAAGAATCTTCCTGCCAACAGGTAGGTCCTGC...TGAACTCTGCACCTCCTTCCAGGCCATCTTGTGAGACTTGGTGTTAATAGCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519565.5
CDS-3UTR CCA 90 bp AAGGAGGTGCAGAGTTCAAAGACAGTCCAAGCAATTCTCAGAAGAGGCGTGCTCCATTTGATTTCTACTTaGCCAAGTTGTACCTGGGCG +
Preference number: 4 (lower is better)
Translates to: KEVQSSKTVQAILRRGVLHLIST*PSCTWA
Trigger: CGCCCAGGTACAACTTGGCCAAGTAGAAATCAAATG...GAGCACGCCTCTTCTGAGAATTGCTTGGACTGTCTTTGAACTCTGCACCTCCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560949.5
CDS-3UTR TCA 90 bp AGAGTTCAAAGACAGTCCAAGCAATTCTCAGAAGAGGCGTGCTCAGAATTCTTAGTAAAGTGCTTGCACTaGGGACATGGCTTGGTGCTG +
Preference number: 4 (lower is better)
Translates to: RVQRQSKQFSEEACSEFLVKCLH*GHGLVL
Trigger: CAGCACCAAGCCATGTCCTCAGTGCAAGCACTTTAC...TAAGAATTCTGAGCACGCCTCTTCTGAGAATTGCTTGGACTGTCTTTGAACTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359704.2
ENST00000368414.6
ENST00000519565.5
ENST00000560949.5
CDS-3UTR TCA 90 bp TCTGAAAAGTGGCCTTGCTTGTTGGTACAGATAGGACTTCAGCTATTAACACCAGTAAAGTGCTTGCACTaGGGACATGGCTTGGTGCTG +
Preference number: 4 (lower is better)
Translates to: SEKWPCLLVQIGLQLLTPVKCLH*GHGLVL
Trigger: CAGCACCAAGCCATGTCCTCAGTGCAAGCACTTTAC...TGGTGTTAATAGCTGAAGTCCTATCTGTACCAACAAGCAAGGCCACTTTTCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359704.2
ENST00000368414.6
ENST00000519565.5
ENST00000560949.5
CDS-3UTR TCA 90 bp ACCAAGTCTCACAAGATGGCCTGGAAGGAGGTGCAGAGTTCAAAGACAGTCCAATTTGTATTTGCTTTCTaGTCTGGAAGGGGTGGGAAT +
Preference number: 4 (lower is better)
Translates to: TKSHKMAWKEVQSSKTVQFVFAF*SGRGGN
Trigger: ATTCCCACCCCTTCCAGATCAGAAAGCAAATACAAA...TTGGACTGTCTTTGAACTCTGCACCTCCTTCCAGGCCATCTTGTGAGACTTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359704.2
ENST00000368414.6
ENST00000519565.5
ENST00000560949.5
CDS-3UTR TCA 90 bp TCGGAGCTGGCGGTATCTCTCACCACATCGGTAACAAAAATTAGTGTTACATTGATTTCGCTGGCCCAGTaGCGCAACAATTTGTCTCCT +
Preference number: 4 (lower is better)
Translates to: SELAVSLTTSVTKISVTLISLAQ*RNNLSP
Trigger: AGGAGACAAATTGTTGCGTCACTGGGCCAGCGAAAT...CAATGTAACACTAATTTTTGTTACCGATGTGGTGAGAGATACCGCCAGCTCCGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000432158.6
ENST00000519565.5
CDS-3UTR TCA 90 bp GGAAGGAGGTGCAGAGTTCAAAGACAGTCCAAGCAATTCTCAGAAGAGGCGTGCATTAGTGTTACATTGTaGGCAGGTCATATGGTCACA +
Preference number: 4 (lower is better)
Translates to: GRRCRVQRQSKQFSEEACISVTL*AGHMVT
Trigger: TGTGACCATATGACCTGCTCACAATGTAACACTAAT...GCACGCCTCTTCTGAGAATTGCTTGGACTGTCTTTGAACTCTGCACCTCCTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359704.2
ENST00000368414.6
ENST00000519565.5
ENST00000560949.5
CDS-3UTR TCA 90 bp GGTGCAGAGTTCAAAGACAGTCCAAGCAATTCTCAGAAGAGGCGTGCTCAGAATGCCAAATGTTGGGTTTaGTTCCTGGTTCTACCACTT +
Preference number: 4 (lower is better)
Translates to: GAEFKDSPSNSQKRRAQNAKCWV*FLVLPL
Trigger: AAGTGGTAGAACCAGGAATCAAACCCAACATTTGGC...ATTCTGAGCACGCCTCTTCTGAGAATTGCTTGGACTGTCTTTGAACTCTGCACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359704.2
ENST00000560949.5
CDS-3UTR TCA 90 bp GCAGCAATTTGTTTAGGGAAAGGACAGGATACCATGTTGGGAGTGCACCATAGCACCAGCTTAGCTGGATaGAATCATCTGCATGTTACC +
Preference number: 4 (lower is better)
Translates to: AAICLGKGQDTMLGVHHSTSLAG*NHLHVT
Trigger: GGTAACATGCAGATGATTTCATCCAGCTAAGCTGGT...GCTATGGTGCACTCCCAACATGGTATCCTGTCCTTTCCCTAAACAAATTGCTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359704.2
ENST00000368414.6
ENST00000519565.5
ENST00000560949.5
CDS-3UTR TCA 90 bp GGAAGGAGGTGCAGAGTTCAAAGACAGTCCAAGCAATTCTCAGAAGAGGCGTGCTTTCCCAAAAGCAGCTaGTATTGGACAAACTCAAGA +
Preference number: 4 (lower is better)
Translates to: GRRCRVQRQSKQFSEEACFPKSS*YWTNSR
Trigger: TCTTGAGTTTGTCCAATATCAGCTGCTTTTGGGAAA...GCACGCCTCTTCTGAGAATTGCTTGGACTGTCTTTGAACTCTGCACCTCCTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519565.5
ENST00000560949.5
CDS-3UTR TCA 90 bp ATACCATGTTGGGAGTGCACCATAGCTAGAGGCATTGTGGCCCACGGAGAATCACTCTCTCACATTATCTaGCACACATCTCCTCAAATT +
Preference number: 4 (lower is better)
Translates to: IPCWECTIARGIVAHGESLSHII*HTSPQI
Trigger: AATTTGAGGAGATGTGTGTCAGATAATGTGAGAGAG...TGATTCTCCGTGGGCCACAATGCCTCTAGCTATGGTGCACTCCCAACATGGTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519565.5
CDS-3UTR TCA 90 bp ATACCATGTTGGGAGTGCACCATAGCTAGAGGCATTGTGGCCCACGGAGAATCAGAGTGCGTTCAGTGTTaGATTCATTTCATTACAGTG +
Preference number: 4 (lower is better)
Translates to: IPCWECTIARGIVAHGESECVQC*IHFITV
Trigger: CACTGTAATGAAATGAATTCAACACTGAACGCACTC...TGATTCTCCGTGGGCCACAATGCCTCTAGCTATGGTGCACTCCCAACATGGTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519565.5
CDS-3UTR GCA 90 bp TTGGCAGATGTGCCCTCATTTGACAAAGGTCAGGAAGGAATTCTAATGTTTCCCGCTGGATGTGGATCTTaGACTTTGGACACTTCTGGG +
Preference number: 4 (lower is better)
Translates to: LADVPSFDKGQEGILMFPAGCGS*TLDTSG
Trigger: CCCAGAAGTGTCCAAAGTGCAAGATCCACATCCAGC...GGGAAACATTAGAATTCCTTCCTGACCTTTGTCAAATGAGGGCACATCTGCCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519565.5
CDS-3UTR GCA 90 bp CTCACAAGATGGCCTGGAAGGAGGTGCAGAGTTCAAAGACAGTCCAAGCAATTCTCTGAAAAGTGGCCTTaGTTGTTGGTACAGATAGGA +
Preference number: 4 (lower is better)
Translates to: LTRWPGRRCRVQRQSKQFSEKWP*LLVQIG
Trigger: TCCTATCTGTACCAACAAGCAAGGCCACTTTTCAGA...GAATTGCTTGGACTGTCTTTGAACTCTGCACCTCCTTCCAGGCCATCTTGTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359704.2
ENST00000368414.6
ENST00000519565.5
ENST00000560949.5
CDS-3UTR GCA 90 bp AACACCTTCATGCCAAGGAGAGTGGCACTTAAAACACCAGACGAATTGGCAGGTGGGTATCCATGTCAGTaGTCTCCTTACCTTAAATGG +
Preference number: 4 (lower is better)
Translates to: NTFMPRRVALKTPDELAGGYPCQ*SPYLKW
Trigger: CCATTTAAGGTAAGGAGAGCACTGACATGGATACCC...ACCTGCCAATTCGTCTGGTGTTTTAAGTGCCACTCTCCTTGGCATGAAGGTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432158.6
CDS-3UTR GCA 90 bp TTGAAAGATAAAAGAATTATACTGCTGGGGCCACAGATTATAATAGGTGCATTCCCGAGATCATGCCACTaGACTCCAGCCTGGGCGCTC +
Preference number: 4 (lower is better)
Translates to: LKDKRIILLGPQIIIGAFPRSCH*TPAWAL
Trigger: GAGCGCCCAGGCTGGAGTGCAGTGGCATGATCTCGG...GAATGCACCTATTATAATCTGTGGCCCCAGCAGTATAATTCTTTTATCTTTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519565.5
CDS-3UTR GCA 90 bp CTTCTGGGCATTCCTCTGCCCATGCTCAATTTCGCTGGCCCAGTGACGCAACAAACATCCCTAAAGATATaGTTTCTCCTTAGCACTTTA +
Preference number: 4 (lower is better)
Translates to: LLGIPLPMLNFAGPVTQQTSLKI*FLLSTL
Trigger: TAAAGTGCTAAGGAGAAAGCATATCTTTAGGGATGT...TTGTTGCGTCACTGGGCCAGCGAAATTGAGCATGGGCAGAGGAATGCCCAGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519565.5
CDS-3UTR CCA 90 bp CACCAAGTCTCACAAGATGGCCTGGAAGGAGGTGCAGAGTTCAAAGACAGTCCATCTTTACTCAAGTGCTaGCAATGGACACTGTATATG +
Preference number: 4 (lower is better)
Translates to: HQVSQDGLEGGAEFKDSPSLLKC*QWTLYM
Trigger: CATATACAGTGTCCATTGCCAGCACTTGAGTAAAGA...TGGACTGTCTTTGAACTCTGCACCTCCTTCCAGGCCATCTTGTGAGACTTGGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359704.2
CDS-3UTR CCA 90 bp TTTTCAAGATGTGACTCACAGATGGGTGTACCCTTTGGTATCGCTCCTACTCCAGACATGGCTTGGTGCTaGAATCAATACGGCCAAGTT +
Preference number: 4 (lower is better)
Translates to: FSRCDSQMGVPFGIAPTPDMAWC*NQYGQV
Trigger: AACTTGGCCGTATTGATTCCAGCACCAAGCCATGTC...TGGAGTAGGAGCGATACCAAAGGGTACACCCATCTGTGAGTCACATCTTGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359704.2
ENST00000368414.6
ENST00000519565.5
ENST00000560949.5
CDS-3UTR CCA 90 bp CTATTAACACCAAGTCTCACAAGATGGCCTGGAAGGAGGTGCAGAGTTCAAAGAGACATGGCTTGGTGCTaGAATCAATACGGCCAAGTT +
Preference number: 4 (lower is better)
Translates to: LLTPSLTRWPGRRCRVQRDMAWC*NQYGQV
Trigger: AACTTGGCCGTATTGATTCCAGCACCAAGCCATGTC...TCTTTGAACTCTGCACCTCCTTCCAGGCCATCTTGTGAGACTTGGTGTTAATAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359704.2
ENST00000368414.6
ENST00000519565.5
ENST00000560949.5
CDS-3UTR CCA 90 bp TTGGTACAGATAGGACTTCAGCTATTAACACCAAGTCTCACAAGATGGCCTGGAACTGAGGACATGGCTTaGTGCTGGAATCAATACGGC +
Preference number: 4 (lower is better)
Translates to: LVQIGLQLLTPSLTRWPGTEDMA*CWNQYG
Trigger: GCCGTATTGATTCCAGCACCAAGCCATGTCCTCAGT...TCCAGGCCATCTTGTGAGACTTGGTGTTAATAGCTGAAGTCCTATCTGTACCAA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359704.2
ENST00000368414.6
ENST00000519565.5
ENST00000560949.5
CDS-3UTR CCA 90 bp ATGTGGAAAAATAGTGTAGCGGCATGGAACTGGGTAAGTACAAGGTTACTGGGCCTTGCACTGAGGACATaGCTTGGTGCTGGAATCAAT +
Preference number: 4 (lower is better)
Translates to: MWKNSVAAWNWVSTRLLGLALRT*LGAGIN
Trigger: ATTGATTCCAGCACCAAGCCATGTCCTCAGTGCAAG...GCCCAGTAACCTTGTACTTACCCAGTTCCATGCCGCTACACTATTTTTCCACAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000368414.6
ENST00000519565.5
ENST00000560949.5
CDS-3UTR CCA 90 bp GCAGAGTTCAAAGACAGTCCAAGCAATTCTCAGAAGAGGCGTGCTCAGAATTCTCTTGCACTGAGGACATaGCTTGGTGCTGGAATCAAT +
Preference number: 4 (lower is better)
Translates to: AEFKDSPSNSQKRRAQNSLALRT*LGAGIN
Trigger: ATTGATTCCAGCACCAAGCCATGTCCTCAGTGCAAG...AGAATTCTGAGCACGCCTCTTCTGAGAATTGCTTGGACTGTCTTTGAACTCTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359704.2
ENST00000368414.6
ENST00000519565.5
ENST00000560949.5
CDS-3UTR CCA 90 bp GCAGAGTTCAAAGACAGTCCAAGCAATTCTCAGAAGAGGCGTGCTCAGAATTCTCATGCTCAATTTCGCTaGCCCAGTGACGCAACAATT +
Preference number: 4 (lower is better)
Translates to: AEFKDSPSNSQKRRAQNSHAQFR*PSDATI
Trigger: AATTGTTGCGTCACTGGGCCAGCGAAATTGAGCATG...AGAATTCTGAGCACGCCTCTTCTGAGAATTGCTTGGACTGTCTTTGAACTCTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359704.2
ENST00000368414.6
ENST00000519565.5
ENST00000560949.5
CDS-3UTR CCA 90 bp TCCAACCAGCTTAGCTGGATGAAATCATCTGCATGTTACCAGTGCATACCTGTCCATGCTCAATTTCGCTaGCCCAGTGACGCAACAATT +
Preference number: 4 (lower is better)
Translates to: SNQLSWMKSSACYQCIPVHAQFR*PSDATI
Trigger: AATTGTTGCGTCACTGGGCCAGCGAAATTGAGCATG...GACAGGTATGCACTGGTAACATGCAGATGATTTCATCCAGCTAAGCTGGTTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359704.2
ENST00000519565.5
ENST00000560949.5
CDS-3UTR CCA 90 bp ACAGATAGGACTTCAGCTATTAACACCAAGTCTCACAAGATGGCCTGGAAGGAGTGTGAGCAGGTCATATaGTCACATCCTTCAGTTCGC +
Preference number: 4 (lower is better)
Translates to: TDRTSAINTKSHKMAWKECEQVI*SHPSVR
Trigger: GCGAACTGAAGGATGTGACCATATGACCTGCTCACA...CTCCTTCCAGGCCATCTTGTGAGACTTGGTGTTAATAGCTGAAGTCCTATCTGT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359704.2
ENST00000368414.6
ENST00000519565.5
ENST00000560949.5
CDS-3UTR CCA 90 bp CTTGCAGTTAACACCTTCATGCCAAGGAGAGTGGCACTTAAAACACCAGACGAATGTGAGCAGGTCATATaGTCACATCCTTCAGTTCGC +
Preference number: 4 (lower is better)
Translates to: LAVNTFMPRRVALKTPDECEQVI*SHPSVR
Trigger: GCGAACTGAAGGATGTGACCATATGACCTGCTCACA...TTCGTCTGGTGTTTTAAGTGCCACTCTCCTTGGCATGAAGGTGTTAACTGCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000432158.6
ENST00000519565.5
CDS-3UTR CCA 90 bp AAGACAGTCCAAGCAATTCTCAGAAGAGGCGTGCTCAGAATTCTTAGGATAACTCGATTACAACCGCTATaGCCCCTAGTGCCAATCCCA +
Preference number: 4 (lower is better)
Translates to: KTVQAILRRGVLRILRITRLQPL*PLVPIP
Trigger: TGGGATTGGCACTAGGGGCCATAGCGGTTGTAATCG...AGTTATCCTAAGAATTCTGAGCACGCCTCTTCTGAGAATTGCTTGGACTGTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359704.2
ENST00000368414.6
ENST00000519565.5
ENST00000560949.5
CDS-3UTR CCA 90 bp ACAGATAGGACTTCAGCTATTAACACCAAGTCTCACAAGATGGCCTGGAAGGAGGATGTGACTCACAGATaGGTGTACCCTTTGGTATCG +
Preference number: 4 (lower is better)
Translates to: TDRTSAINTKSHKMAWKEDVTHR*VYPLVS
Trigger: CGATACCAAAGGGTACACCCATCTGTGAGTCACATC...CTCCTTCCAGGCCATCTTGTGAGACTTGGTGTTAATAGCTGAAGTCCTATCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359704.2
ENST00000368414.6
ENST00000519565.5
ENST00000560949.5
CDS-3UTR CCA 90 bp ATGTGGAAAAATAGTGTAGCGGCATGGAACTGGGTAAGTACAAGGTTACTGGGCGATGTGACTCACAGATaGGTGTACCCTTTGGTATCG +
Preference number: 4 (lower is better)
Translates to: MWKNSVAAWNWVSTRLLGDVTHR*VYPLVS
Trigger: CGATACCAAAGGGTACACCCATCTGTGAGTCACATC...GCCCAGTAACCTTGTACTTACCCAGTTCCATGCCGCTACACTATTTTTCCACAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000368414.6
ENST00000519565.5
ENST00000560949.5
CDS-3UTR CCA 90 bp ATGTGGAAAAATAGTGTAGCGGCATGGAACTGGGTAAGTACAAGGTTACTGGGCGTAGCGGCATGGAACTaGGTAAGTACAAGGTTACTG +
Preference number: 4 (lower is better)
Translates to: MWKNSVAAWNWVSTRLLGVAAWN*VSTRLL
Trigger: CAGTAACCTTGTACTTACCCAGTTCCATGCCGCTAC...GCCCAGTAACCTTGTACTTACCCAGTTCCATGCCGCTACACTATTTTTCCACAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000368414.6
ENST00000519565.5
ENST00000560949.5
CDS-3UTR CCA 90 bp ACACCAGACGAATTGGCAGGTAGGGCACTGGATCTGTTCATCACAAAGAACAAAAATCTCACGATTGGTTaGCTGGGGTATCCATGTCAG +
Preference number: 4 (lower is better)
Translates to: TPDELAGRALDLFITKNKNLTIG*LGYPCQ
Trigger: CTGACATGGATACCCCAGCCAACCAATCGTGAGATT...TTTGTTCTTTGTGATGAACAGATCCAGTGCCCTACCTGCCAATTCGTCTGGTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000432158.6
CDS-3UTR CCA 90 bp CTTGCAGTTAACACCTTCATGCCAAGGAGAGTGGCACTTAAAACACCAGACGAACATGAATCTCACGATTaGTTGGCTGGGGTATCCATG +
Preference number: 4 (lower is better)
Translates to: LAVNTFMPRRVALKTPDEHESHD*LAGVSM
Trigger: CATGGATACCCCAGCCAACCAATCGTGAGATTCATG...TTCGTCTGGTGTTTTAAGTGCCACTCTCCTTGGCATGAAGGTGTTAACTGCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432158.6
CDS-3UTR CCA 90 bp ATACCATGTTGGGAGTGCACCATAGCTAGAGGCATTGTGGCCCACGGAGAATCAAGTTCAGTATCGAAATaGCCTGTTGTCTACATTGAC +
Preference number: 4 (lower is better)
Translates to: IPCWECTIARGIVAHGESSSVSK*PVVYID
Trigger: GTCAATGTAGACAACAGGCCATTTCGATACTGAACT...TGATTCTCCGTGGGCCACAATGCCTCTAGCTATGGTGCACTCCCAACATGGTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519565.5
ENST00000560949.5
CDS-3UTR CCA 90 bp GGAAGGAGGTGCAGAGTTCAAAGACAGTCCAAGCAATTCTCAGAAGAGGCGTGCTTTGTAGAAAGTGTCTaGAAGGACACATACCAAACC +
Preference number: 4 (lower is better)
Translates to: GRRCRVQRQSKQFSEEACFVESV*KDTYQT
Trigger: GGTTTGGTATGTGTCCTTCCAGACACTTTCTACAAA...GCACGCCTCTTCTGAGAATTGCTTGGACTGTCTTTGAACTCTGCACCTCCTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519565.5
ENST00000560949.5
CDS-3UTR TCA 90 bp GAGTGGCACTTAAAACACCAGACGAATTGGCAGGTAGGGCACTGGATCTGTTCAATTAGTGTTACATTGTaGGCAGGTCATATGGTCACA +
Preference number: 4 (lower is better)
Translates to: EWHLKHQTNWQVGHWICSISVTL*AGHMVT
Trigger: TGTGACCATATGACCTGCTCACAATGTAACACTAAT...TGAACAGATCCAGTGCCCTACCTGCCAATTCGTCTGGTGTTTTAAGTGCCACTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432158.6
CDS-3UTR TCA 90 bp CTTCAGCTATTAACACCAAGTCTCACAAGATGGCCTGGAAGGAGGTGCAGAGTTTGCATCCAAATATACTaGGGTTTGATGTGTGGTCTC +
Preference number: 4 (lower is better)
Translates to: LQLLTPSLTRWPGRRCRVCIQIY*GLMCGL
Trigger: GAGACCACACATCAAACCTCAGTATATTTGGATGCA...AACTCTGCACCTCCTTCCAGGCCATCTTGTGAGACTTGGTGTTAATAGCTGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359704.2
ENST00000368414.6
ENST00000519565.5
ENST00000560949.5
CDS-3UTR TCA 90 bp CAAGATGGCCTGGAAGGAGGTGCAGAGTTCAAAGACAGTCCAAGCAATTCTCAGAGAAATAAAAATCCCTaGGTAGGCCAAAGACAACAG +
Preference number: 4 (lower is better)
Translates to: QDGLEGGAEFKDSPSNSQRNKNP*VGQRQQ
Trigger: CTGTTGTCTTTGGCCTACTCAGGGATTTTTATTTCT...CTGAGAATTGCTTGGACTGTCTTTGAACTCTGCACCTCCTTCCAGGCCATCTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000519565.5
ENST00000560949.5
CDS-3UTR TCA 90 bp TGCTTTTACCGCCAGCAGCATGTGACACTGTACTTACTGAGAAGGAACAGTACAAGCACCACTGAATCTTaGTACCACAGCAGAGAAAGT +
Preference number: 4 (lower is better)
Translates to: CFYRQQHVTLYLLRRNSTSTTES*YHSRES
Trigger: ACTTTCTCTGCTGTGGTATCAAGATTCAGTGGTGCT...TGTACTGTTCCTTCTCAGTAAGTACAGTGTCACATGCTGCTGGCGGTAAAAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519565.5
CDS-3UTR TCA 90 bp TGTGACTCACAGATGGGTGTACCCTTTGGTATCGCTCCTACTCCAACCAGCTTAGAACAAGGTATTTTCTaGCAAGCACCACTGAATCTT +
Preference number: 4 (lower is better)
Translates to: CDSQMGVPFGIAPTPTSLEQGIF*QAPLNL
Trigger: AAGATTCAGTGGTGCTTGTCAGAAAATACCTTGTTC...TAAGCTGGTTGGAGTAGGAGCGATACCAAAGGGTACACCCATCTGTGAGTCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519565.5
CDS-3UTR TCA 90 bp CTATTAACACCAAGTCTCACAAGATGGCCTGGAAGGAGGTGCAGAGTTCAAAGAAGATGTGCCCTCATTTaGCAAAGGTCAGGAAGGAAT +
Preference number: 4 (lower is better)
Translates to: LLTPSLTRWPGRRCRVQRRCALI*QRSGRN
Trigger: ATTCCTTCCTGACCTTTGTCAAATGAGGGCACATCT...TCTTTGAACTCTGCACCTCCTTCCAGGCCATCTTGTGAGACTTGGTGTTAATAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519565.5
CDS-3UTR TCA 90 bp CTGCTGGGGCCACAGATTATAATAGGTGCATTCAGTGAACTCTTATCTTCTGAACAGCCTGGGCAACATTaGGAGAACCTCTGTCTCAAA +
Preference number: 4 (lower is better)
Translates to: LLGPQIIIGAFSELLSSEQPGQH*ENLCLK
Trigger: TTTGAGACAGAGGTTCTCTCAATGTTGCCCAGGCTG...TTCAGAAGATAAGAGTTCACTGAATGCACCTATTATAATCTGTGGCCCCAGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519565.5
CDS-3UTR TCA 90 bp CAAGATGGCCTGGAAGGAGGTGCAGAGTTCAAAGACAGTCCAAGCAATTCTCAGTGTAGGACGTTTTGCTaGAACAAAGACCATAAACCA +
Preference number: 4 (lower is better)
Translates to: QDGLEGGAEFKDSPSNSQCRTFC*NKDHKP
Trigger: TGGTTTATGGTCTTTGTTTCAGCAAAACGTCCTACA...CTGAGAATTGCTTGGACTGTCTTTGAACTCTGCACCTCCTTCCAGGCCATCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519565.5
CDS-3UTR GCA 90 bp CTCACAAGATGGCCTGGAAGGAGGTGCAGAGTTCAAAGACAGTCCAAGCAATTCCCTCATTATGAAGTTTaGCTTCAAGAGCCAATGTCA +
Preference number: 4 (lower is better)
Translates to: LTRWPGRRCRVQRQSKQFPHYEV*LQEPMS
Trigger: TGACATTGGCTCTTGAAGGCAAACTTCATAATGAGG...GAATTGCTTGGACTGTCTTTGAACTCTGCACCTCCTTCCAGGCCATCTTGTGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359704.2
ENST00000368414.6
CDS-3UTR GCA 90 bp CTGCTGGGGCCACAGATTATAATAGGTGCATTCAGTGAACTCTTATCTTCTGAAGAGGACATGGCTTGGTaGTGGAATCAATACGGCCAA +
Preference number: 4 (lower is better)
Translates to: LLGPQIIIGAFSELLSSEEDMAW*WNQYGQ
Trigger: TTGGCCGTATTGATTCCAGCACCAAGCCATGTCCTC...TTCAGAAGATAAGAGTTCACTGAATGCACCTATTATAATCTGTGGCCCCAGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359704.2
ENST00000368414.6
ENST00000519565.5
ENST00000560949.5
CDS-3UTR GCA 90 bp AGAATTATACTGCTGGGGCCACAGATTATAATAGGTGCATTCAGTGAACTCTTAGCATTCCTCTGCCCATaGTCAATTTCGCTGGCCCAG +
Preference number: 4 (lower is better)
Translates to: RIILLGPQIIIGAFSELLAFLCP*SISLAQ
Trigger: CTGGGCCAGCGAAATTGAGCATGGGCAGAGGAATGC...TAAGAGTTCACTGAATGCACCTATTATAATCTGTGGCCCCAGCAGTATAATTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359704.2
ENST00000368414.6
ENST00000519565.5
ENST00000560949.5
CDS-3UTR GCA 90 bp CTGCTGGGGCCACAGATTATAATAGGTGCATTCAGTGAACTCTTATCTTCTGAATTCTGGGCATTCCTCTaGCCATGCTCAATTTCGCTG +
Preference number: 4 (lower is better)
Translates to: LLGPQIIIGAFSELLSSEFWAFL*PCSISL
Trigger: CAGCGAAATTGAGCATGGGCAGAGGAATGCCCAGAA...TTCAGAAGATAAGAGTTCACTGAATGCACCTATTATAATCTGTGGCCCCAGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359704.2
ENST00000368414.6
ENST00000519565.5
ENST00000560949.5
CDS-3UTR GCA 90 bp TGTTCATCACAAAGAACAAAGATCTTAGTCTCAGTACAGGGTGCCATACTGTGGGCTGGATGTGGATCTTaGACTTTGGACACTTCTGGG +
Preference number: 4 (lower is better)
Translates to: CSSQRTKILVSVQGAILWAGCGS*TLDTSG
Trigger: CCCAGAAGTGTCCAAAGTGCAAGATCCACATCCAGC...CCACAGTATGGCACCCTGTACTGAGACTAAGATCTTTGTTCTTTGTGATGAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432158.6
CDS-3UTR GCA 90 bp TTGGTACAGATAGGACTTCAGCTATTAACACCAAGTCTCACAAGATGGCCTGGATCTGCATGTTACCAGTaGATACCTGTCCGTGATCGT +
Preference number: 4 (lower is better)
Translates to: LVQIGLQLLTPSLTRWPGSACYQ*IPVRDR
Trigger: ACGATCACGGACAGGTATGCACTGGTAACATGCAGA...TCCAGGCCATCTTGTGAGACTTGGTGTTAATAGCTGAAGTCCTATCTGTACCAA
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359704.2
ENST00000368414.6
ENST00000519565.5
ENST00000560949.5
CDS-3UTR GCA 90 bp TCAGCTATTAACACCAAGTCTCACAAGATGGCCTGGAAGGAGGTGCAGAGTTCATCTGAAAAGTGGCCTTaGTTGTTGGTACAGATAGGA +
Preference number: 4 (lower is better)
Translates to: SAINTKSHKMAWKEVQSSSEKWP*LLVQIG
Trigger: TCCTATCTGTACCAACAAGCAAGGCCACTTTTCAGA...TGAACTCTGCACCTCCTTCCAGGCCATCTTGTGAGACTTGGTGTTAATAGCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359704.2
ENST00000368414.6
ENST00000519565.5
ENST00000560949.5
CDS-3UTR GCA 90 bp ATACCATGTTGGGAGTGCACCATAGCTAGAGGCATTGTGGCCCACGGAGAATCACATTGCATGATGTATTaGACACATCATGTGGTAAAC +
Preference number: 4 (lower is better)
Translates to: IPCWECTIARGIVAHGESHCMMY*THHVVN
Trigger: GTTTACCACATGATGTGTGCAATACATCATGCAATG...TGATTCTCCGTGGGCCACAATGCCTCTAGCTATGGTGCACTCCCAACATGGTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519565.5
CDS-3UTR CCA 90 bp TCTCAGTGTTTTTCAAGATGTGACTCACAGATGGGTGTACCCTTTGGTATCGCTGACATGGCTTGGTGCTaGAATCAATACGGCCAAGTT +
Preference number: 4 (lower is better)
Translates to: SQCFSRCDSQMGVPFGIADMAWC*NQYGQV
Trigger: AACTTGGCCGTATTGATTCCAGCACCAAGCCATGTC...AGCGATACCAAAGGGTACACCCATCTGTGAGTCACATCTTGAAAAACACTGAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359704.2
ENST00000368414.6
ENST00000519565.5
ENST00000560949.5
CDS-3UTR CCA 90 bp GCAGCAATTTGTTTAGGGAAAGGACAGGATACCATGTTGGGAGTGCACCATAGCTGGCAGGTAGGGCACTaGATTTTGTATTTGCTTTCT +
Preference number: 4 (lower is better)
Translates to: AAICLGKGQDTMLGVHHSWQVGH*ILYLLS
Trigger: AGAAAGCAAATACAAAATCCAGTGCCCTACCTGCCA...GCTATGGTGCACTCCCAACATGGTATCCTGTCCTTTCCCTAAACAAATTGCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359704.2
ENST00000368414.6
ENST00000519565.5
ENST00000560949.5
CDS-3UTR CCA 90 bp TCAGCTATTAACACCAAGTCTCACAAGATGGCCTGGAAGGAGGTGCAGAGTTCATGGCAGGTAGGGCACTaGATTTTGTATTTGCTTTCT +
Preference number: 4 (lower is better)
Translates to: SAINTKSHKMAWKEVQSSWQVGH*ILYLLS
Trigger: AGAAAGCAAATACAAAATCCAGTGCCCTACCTGCCA...TGAACTCTGCACCTCCTTCCAGGCCATCTTGTGAGACTTGGTGTTAATAGCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359704.2
ENST00000368414.6
ENST00000519565.5
ENST00000560949.5
CDS-3UTR CCA 90 bp CTATTAACACCAAGTCTCACAAGATGGCCTGGAAGGAGGTGCAGAGTTCAAAGACATCCTTCAGTTCGCTaGATGTGGATCTTGCACTTT +
Preference number: 4 (lower is better)
Translates to: LLTPSLTRWPGRRCRVQRHPSVR*MWILHF
Trigger: AAAGTGCAAGATCCACATCCAGCGAACTGAAGGATG...TCTTTGAACTCTGCACCTCCTTCCAGGCCATCTTGTGAGACTTGGTGTTAATAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359704.2
ENST00000368414.6
ENST00000519565.5
ENST00000560949.5
CDS-3UTR CCA 90 bp CTTGCAGTTAACACCTTCATGCCAAGGAGAGTGGCACTTAAAACACCAGACGAACATCCTTCAGTTCGCTaGATGTGGATCTTGCACTTT +
Preference number: 4 (lower is better)
Translates to: LAVNTFMPRRVALKTPDEHPSVR*MWILHF
Trigger: AAAGTGCAAGATCCACATCCAGCGAACTGAAGGATG...TTCGTCTGGTGTTTTAAGTGCCACTCTCCTTGGCATGAAGGTGTTAACTGCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000432158.6
ENST00000519565.5
CDS-3UTR CCA 90 bp TCAGCTATTAACACCAAGTCTCACAAGATGGCCTGGAAGGAGGTGCAGAGTTCATCCAACCAGCTTAGCTaGATGAAATCATCTGCATGT +
Preference number: 4 (lower is better)
Translates to: SAINTKSHKMAWKEVQSSSNQLS*MKSSAC
Trigger: ACATGCAGATGATTTCATCCAGCTAAGCTGGTTGGA...TGAACTCTGCACCTCCTTCCAGGCCATCTTGTGAGACTTGGTGTTAATAGCTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359704.2
ENST00000368414.6
ENST00000519565.5
ENST00000560949.5
CDS-3UTR CCA 90 bp TTTTCAAGATGTGACTCACAGATGGGTGTACCCTTTGGTATCGCTCCTACTCCAAATAGTGTAGCGGCATaGAACTGGGTAAGTACAAGG +
Preference number: 4 (lower is better)
Translates to: FSRCDSQMGVPFGIAPTPNSVAA*NWVSTR
Trigger: CCTTGTACTTACCCAGTTCCATGCCGCTACACTATT...TGGAGTAGGAGCGATACCAAAGGGTACACCCATCTGTGAGTCACATCTTGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368414.6
ENST00000519565.5
ENST00000560949.5
CDS-3UTR CCA 90 bp TTCATCACAAAGAACAAAGATCTTAGTCTCAGTACAGGGTGCCATACTGTGGCCTGGCAGGTAGGGCACTaGATCTGTTCATCACAAAGA +
Preference number: 4 (lower is better)
Translates to: FITKNKDLSLSTGCHTVAWQVGH*ICSSQR
Trigger: TCTTTGTGATGAACAGATCCAGTGCCCTACCTGCCA...GGCCACAGTATGGCACCCTGTACTGAGACTAAGATCTTTGTTCTTTGTGATGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432158.6
CDS-3UTR CCA 90 bp GTCTCACAAGATGGCCTGGAAGGAGGTGCAGAGTTCAAAGACAGTCCAAGCAATAGTTCAGTATCGAAATaGCCTGTTGTCTACATTGAC +
Preference number: 4 (lower is better)
Translates to: VSQDGLEGGAEFKDSPSNSSVSK*PVVYID
Trigger: GTCAATGTAGACAACAGGCCATTTCGATACTGAACT...ATTGCTTGGACTGTCTTTGAACTCTGCACCTCCTTCCAGGCCATCTTGTGAGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519565.5
ENST00000560949.5
CDS-3UTR CCA 90 bp ATCTCCTTAAATGAGGTCTCTCTGGGAGGTAGCGATATTTGCATCCAAATATACGACCTGGGGTCAGGTTaGATGAATGTCCACACATGC +
Preference number: 4 (lower is better)
Translates to: ISLNEVSLGGSDICIQIYDLGSG*MNVHTC
Trigger: GCATGTGTGGACATTCATCCAACCTGACCCCAGGTC...GTATATTTGGATGCAAATATCGCTACCTCCCAGAGAGACCTCATTTAAGGAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519565.5
CDS-3UTR CCA 90 bp ATCTCCTTAAATGAGGTCTCTCTGGGAGGTAGCGATATTTGCATCCAAATATACTCCCAAGCTGGGGCATaGCGAAGTGAACACATCACA +
Preference number: 4 (lower is better)
Translates to: ISLNEVSLGGSDICIQIYSQAGA*RSEHIT
Trigger: TGTGATGTGTTCACTTCGCCATGCCCCAGCTTGGGA...GTATATTTGGATGCAAATATCGCTACCTCCCAGAGAGACCTCATTTAAGGAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519565.5
3UTR CAA 72 bp ATGCCAAGGAGAGTGGCACTTAAAACACCAGACGAATaGGCAGGTAGGGCACTGGATTTTGTATTTGCTTTC +
Preference number: 4 (lower is better)
Translates to: MPRRVALKTPDE*AGRALDFVFAF
Trigger: GAAAGCAAATACAAAATCCAGTGCCCTACCTGCCAATTCGTCTGGTGTTTTAAGTGCCACTCTCCTTGGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519565.5
CDS-3UTR TCA 90 bp GTCTCACAAGATGGCCTGGAAGGAGGTGCAGAGTTCAAAGACAGTCCAAGCAATAATTCACATTTGTCCTaGCCATATTTCACTCTCTAC +
Preference number: 4 (lower is better)
Translates to: VSQDGLEGGAEFKDSPSNNSHLS*PYFTLY
Trigger: GTAGAGAGTGAAATATGGTCAGGACAAATGTGAATT...ATTGCTTGGACTGTCTTTGAACTCTGCACCTCCTTCCAGGCCATCTTGTGAGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359704.2
ENST00000368414.6
CDS-3UTR TCA 90 bp GCAGCAATTTGTTTAGGGAAAGGACAGGATACCATGTTGGGAGTGCACCATAGCATTAGTGTTACATTGTaGGCAGGTCATATGGTCACA +
Preference number: 4 (lower is better)
Translates to: AAICLGKGQDTMLGVHHSISVTL*AGHMVT
Trigger: TGTGACCATATGACCTGCTCACAATGTAACACTAAT...GCTATGGTGCACTCCCAACATGGTATCCTGTCCTTTCCCTAAACAAATTGCTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359704.2
ENST00000368414.6
ENST00000519565.5
ENST00000560949.5
CDS-3UTR TCA 90 bp GGTGCAGAGTTCAAAGACAGTCCAAGCAATTCTCAGAAGAGGCGTGCTCAGAATATTAGTGTTACATTGTaGGCAGGTCATATGGTCACA +
Preference number: 4 (lower is better)
Translates to: GAEFKDSPSNSQKRRAQNISVTL*AGHMVT
Trigger: TGTGACCATATGACCTGCTCACAATGTAACACTAAT...ATTCTGAGCACGCCTCTTCTGAGAATTGCTTGGACTGTCTTTGAACTCTGCACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359704.2
ENST00000368414.6
ENST00000519565.5
ENST00000560949.5
CDS-3UTR TCA 90 bp TTTTCAAGATGTGACTCACAGATGGGTGTACCCTTTGGTATCGCTCCTACTCCATGCATCCAAATATACTaGGGTTTGATGTGTGGTCTC +
Preference number: 4 (lower is better)
Translates to: FSRCDSQMGVPFGIAPTPCIQIY*GLMCGL
Trigger: GAGACCACACATCAAACCTCAGTATATTTGGATGCA...TGGAGTAGGAGCGATACCAAAGGGTACACCCATCTGTGAGTCACATCTTGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359704.2
ENST00000368414.6
ENST00000519565.5
ENST00000560949.5
CDS-3UTR TCA 90 bp AAAACACCAGACGAATTGGCAGGTAGGGCACTGGATCTGTTCATCACAAAGAACTGCATCCAAATATACTaGGGTTTGATGTGTGGTCTC +
Preference number: 4 (lower is better)
Translates to: KTPDELAGRALDLFITKNCIQIY*GLMCGL
Trigger: GAGACCACACATCAAACCTCAGTATATTTGGATGCA...GTTCTTTGTGATGAACAGATCCAGTGCCCTACCTGCCAATTCGTCTGGTGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432158.6
CDS-3UTR TCA 90 bp GATCTTAGTCTCAGTACAGGGTGCCATACTGTGGCCATGAATCTCACGATTGGTTACCTTAAATGGAGATaGCTCCAAACAGCCTTTGAA +
Preference number: 4 (lower is better)
Translates to: DLSLSTGCHTVAMNLTIGYLKWR*LQTAFE
Trigger: TTCAAAGGCTGTTTGGAGTCATCTCCATTTAAGGTA...ACCAATCGTGAGATTCATGGCCACAGTATGGCACCCTGTACTGAGACTAAGATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432158.6
CDS-3UTR TCA 90 bp ACCCTCGCACTAATCTCCTTAAATGAGGTCTCTCTGGGAGGTAGCGATATTTGCTTTCCCAAAAGCAGCTaGTATTGGACAAACTCAAGA +
Preference number: 4 (lower is better)
Translates to: TLALISLNEVSLGGSDICFPKSS*YWTNSR
Trigger: TCTTGAGTTTGTCCAATATCAGCTGCTTTTGGGAAA...GCAAATATCGCTACCTCCCAGAGAGACCTCATTTAAGGAGATTAGTGCGAGGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519565.5
CDS-3UTR TCA 90 bp TTGGGTTGCTTTTACCGCCAGCAGCATGTGACACTGTACTTACTGAGAAGGAACCCTCTTCTCCTTCAGTaGAGAGGAATAGTTAGAATA +
Preference number: 4 (lower is better)
Translates to: LGCFYRQQHVTLYLLRRNPLLLQ*RGIVRI
Trigger: TATTCTAACTATTCCTCTTCACTGAAGGAGAAGAGG...GTTCCTTCTCAGTAAGTACAGTGTCACATGCTGCTGGCGGTAAAAGCAACCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519565.5
CDS-3UTR TCA 90 bp TCTGCCCATGCTCAATTTCGCTGGCCCAGTGACGCAACAATTTGTCTCCTTTTTTGTTCCAGGCACTCCTaGTACATTTCCATTTACAAA +
Preference number: 4 (lower is better)
Translates to: SAHAQFRWPSDATICLLFCSRHS*YISIYK
Trigger: TTTGTAAATGGAAATGTATCAGGAGTGCCTGGAACA...AAAAAGGAGACAAATTGTTGCGTCACTGGGCCAGCGAAATTGAGCATGGGCAGA
44% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000519565.5
CDS-3UTR TCA 90 bp CTCACAAGATGGCCTGGAAGGAGGTGCAGAGTTCAAAGACAGTCCAAGCAATTCACGCAAACACAATATTaGTCTTACAACAGTCACGAA +
Preference number: 4 (lower is better)
Translates to: LTRWPGRRCRVQRQSKQFTQTQY*SYNSHE
Trigger: TTCGTGACTGTTGTAAGATCAATATTGTGTTTGCGT...GAATTGCTTGGACTGTCTTTGAACTCTGCACCTCCTTCCAGGCCATCTTGTGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519565.5
CDS-3UTR TCA 90 bp AGACTGACCCTCGCACTAATCTCCTTAAATGAGGTCTCTCTGGGAGGTAGCGATATTCTATGTTTCACGTaGAACATAAGGTTGGTCTAC +
Preference number: 4 (lower is better)
Translates to: RLTLALISLNEVSLGGSDILCFT*NIRLVY
Trigger: GTAGACCAACCTTATGTTTCACGTGAAACATAGAAT...ATCGCTACCTCCCAGAGAGACCTCATTTAAGGAGATTAGTGCGAGGGTCAGTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519565.5
CDS-3UTR TCA 90 bp AGACTGACCCTCGCACTAATCTCCTTAAATGAGGTCTCTCTGGGAGGTAGCGATAAAATTTGTGTGATCTaGCACTTGGGTTGCTTTTAC +
Preference number: 4 (lower is better)
Translates to: RLTLALISLNEVSLGGSDKICVI*HLGCFY
Trigger: GTAAAAGCAACCCAAGTGTCAGATCACACAAATTTT...ATCGCTACCTCCCAGAGAGACCTCATTTAAGGAGATTAGTGCGAGGGTCAGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519565.5
CDS-3UTR GCA 90 bp TTTTCAAGATGTGACTCACAGATGGGTGTACCCTTTGGTATCGCTCCTACTCCATCTGAAAAGTGGCCTTaGTTGTTGGTACAGATAGGA +
Preference number: 4 (lower is better)
Translates to: FSRCDSQMGVPFGIAPTPSEKWP*LLVQIG
Trigger: TCCTATCTGTACCAACAAGCAAGGCCACTTTTCAGA...TGGAGTAGGAGCGATACCAAAGGGTACACCCATCTGTGAGTCACATCTTGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359704.2
ENST00000368414.6
ENST00000519565.5
ENST00000560949.5
CDS-3UTR GCA 90 bp TCAGCTATTAACACCAAGTCTCACAAGATGGCCTGGAAGGAGGTGCAGAGTTCAAGATGGGAAGAAGACTaGAGAGGCAAAAATCAAGAT +
Preference number: 4 (lower is better)
Translates to: SAINTKSHKMAWKEVQSSRWEED*RGKNQD
Trigger: ATCTTGATTTTTGCCTCTGCAGTCTTCTTCCCATCT...TGAACTCTGCACCTCCTTCCAGGCCATCTTGTGAGACTTGGTGTTAATAGCTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000519565.5
CDS-3UTR CCA 90 bp CTGCTGGGGCCACAGATTATAATAGGTGCATTCAGTGAACTCTTATCTTCTGAAGACATGGCTTGGTGCTaGAATCAATACGGCCAAGTT +
Preference number: 4 (lower is better)
Translates to: LLGPQIIIGAFSELLSSEDMAWC*NQYGQV
Trigger: AACTTGGCCGTATTGATTCCAGCACCAAGCCATGTC...TTCAGAAGATAAGAGTTCACTGAATGCACCTATTATAATCTGTGGCCCCAGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359704.2
ENST00000368414.6
ENST00000519565.5
ENST00000560949.5
CDS-3UTR CCA 90 bp TGCTTGTTGGTACAGATAGGACTTCAGCTATTAACACCAAGTCTCACAAGATGGCATGCTCAATTTCGCTaGCCCAGTGACGCAACAATT +
Preference number: 4 (lower is better)
Translates to: CLLVQIGLQLLTPSLTRWHAQFR*PSDATI
Trigger: AATTGTTGCGTCACTGGGCCAGCGAAATTGAGCATG...CCATCTTGTGAGACTTGGTGTTAATAGCTGAAGTCCTATCTGTACCAACAAGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359704.2
ENST00000368414.6
ENST00000519565.5
ENST00000560949.5
CDS-3UTR CCA 90 bp TGCTTGTTGGTACAGATAGGACTTCAGCTATTAACACCAAGTCTCACAAGATGGTCAGTTCGCTGGATGTaGATCTTGCACTTTGGACAC +
Preference number: 4 (lower is better)
Translates to: CLLVQIGLQLLTPSLTRWSVRWM*ILHFGH
Trigger: GTGTCCAAAGTGCAAGATCCACATCCAGCGAACTGA...CCATCTTGTGAGACTTGGTGTTAATAGCTGAAGTCCTATCTGTACCAACAAGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359704.2
ENST00000368414.6
ENST00000519565.5
ENST00000560949.5
CDS-3UTR CCA 90 bp TGTTCATCACAAAGAACAAAGATCTTAGTCTCAGTACAGGGTGCCATACTGTGGTCAGTTCGCTGGATGTaGATCTTGCACTTTGGACAC +
Preference number: 4 (lower is better)
Translates to: CSSQRTKILVSVQGAILWSVRWM*ILHFGH
Trigger: GTGTCCAAAGTGCAAGATCCACATCCAGCGAACTGA...CCACAGTATGGCACCCTGTACTGAGACTAAGATCTTTGTTCTTTGTGATGAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432158.6
CDS-3UTR CCA 90 bp CTGCTGGGGCCACAGATTATAATAGGTGCATTCAGTGAACTCTTATCTTCTGAATCAGTTCGCTGGATGTaGATCTTGCACTTTGGACAC +
Preference number: 4 (lower is better)
Translates to: LLGPQIIIGAFSELLSSESVRWM*ILHFGH
Trigger: GTGTCCAAAGTGCAAGATCCACATCCAGCGAACTGA...TTCAGAAGATAAGAGTTCACTGAATGCACCTATTATAATCTGTGGCCCCAGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359704.2
ENST00000368414.6
ENST00000519565.5
ENST00000560949.5
CDS-3UTR CCA 90 bp TGGCCTTGCTTGTTGGTACAGATAGGACTTCAGCTATTAACACCAAGTCTCACACATCCTTCAGTTCGCTaGATGTGGATCTTGCACTTT +
Preference number: 4 (lower is better)
Translates to: WPCLLVQIGLQLLTPSLTHPSVR*MWILHF
Trigger: AAAGTGCAAGATCCACATCCAGCGAACTGAAGGATG...TGTGAGACTTGGTGTTAATAGCTGAAGTCCTATCTGTACCAACAAGCAAGGCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359704.2
ENST00000368414.6
ENST00000519565.5
ENST00000560949.5
CDS-3UTR CCA 90 bp AAGGAGGTGCAGAGTTCAAAGACAGTCCAAGCAATTCTCAGAAGAGGCGTGCTCAGGTCTATGAAAATGTaGAAAAATAGTGTAGCGGCA +
Preference number: 4 (lower is better)
Translates to: KEVQSSKTVQAILRRGVLRSMKM*KNSVAA
Trigger: TGCCGCTACACTATTTTTCCACATTTTCATAGACCT...GAGCACGCCTCTTCTGAGAATTGCTTGGACTGTCTTTGAACTCTGCACCTCCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000368414.6
ENST00000519565.5
ENST00000560949.5
CDS-3UTR CCA 90 bp AAGGAGGTGCAGAGTTCAAAGACAGTCCAAGCAATTCTCAGAAGAGGCGTGCTCAGAATGAAAGCATGCTaGATTGTTATTCACGCAAGT +
Preference number: 4 (lower is better)
Translates to: KEVQSSKTVQAILRRGVLRMKAC*IVIHAS
Trigger: ACTTGCGTGAATAACAATCCAGCATGCTTTCATTCT...GAGCACGCCTCTTCTGAGAATTGCTTGGACTGTCTTTGAACTCTGCACCTCCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519565.5
ENST00000560949.5
CDS-3UTR CCA 90 bp GTGTTACATTGTGAGCAGGTCATATGGTCACATCCTTCAGTTCGCTGGATGTGGTTTGTAGAAAGTGTCTaGAAGGACACATACCAAACC +
Preference number: 4 (lower is better)
Translates to: VLHCEQVIWSHPSVRWMWFVESV*KDTYQT
Trigger: GGTTTGGTATGTGTCCTTCCAGACACTTTCTACAAA...CCACATCCAGCGAACTGAAGGATGTGACCATATGACCTGCTCACAATGTAACAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519565.5
CDS-3UTR CCA 90 bp GGTGCAGAGTTCAAAGACAGTCCAAGCAATTCTCAGAAGAGGCGTGCTCAGAATGGCAAGGTATTTATTTaGCTAATCAGGCAGAAAGGA +
Preference number: 4 (lower is better)
Translates to: GAEFKDSPSNSQKRRAQNGKVFI*LIRQKG
Trigger: TCCTTTCTGCCTGATTAGCCAAATAAATACCTTGCC...ATTCTGAGCACGCCTCTTCTGAGAATTGCTTGGACTGTCTTTGAACTCTGCACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519565.5
ENST00000560949.5
CDS-3UTR CCA 90 bp CTTCAGCTATTAACACCAAGTCTCACAAGATGGCCTGGAAGGAGGTGCAGAGTTTTCTGGGAATTGCTGTaGGCATTTATAATTGCCAAC +
Preference number: 4 (lower is better)
Translates to: LQLLTPSLTRWPGRRCRVFWELL*AFIIAN
Trigger: GTTGGCAATTATAAATGCCCACAGCAATTCCCAGAA...AACTCTGCACCTCCTTCCAGGCCATCTTGTGAGACTTGGTGTTAATAGCTGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519565.5
CDS-3UTR CCA 90 bp AACACCTTCATGCCAAGGAGAGTGGCACTTAAAACACCAGACGAATTGGCAGGTAGAAAATCAAGGTGGTaGCAACAAGATGTTGCTTGT +
Preference number: 4 (lower is better)
Translates to: NTFMPRRVALKTPDELAGRKSRW*QQDVAC
Trigger: ACAAGCAACATCTTGTTGCCACCACCTTGATTTTCT...ACCTGCCAATTCGTCTGGTGTTTTAAGTGCCACTCTCCTTGGCATGAAGGTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519565.5
CDS-3UTR CCA 90 bp TGCTTGTTGGTACAGATAGGACTTCAGCTATTAACACCAAGTCTCACAAGATGGGCTCAATTGGAGCCTTaGGACTCAAGAGATAGTCAG +
Preference number: 4 (lower is better)
Translates to: CLLVQIGLQLLTPSLTRWAQLEP*DSRDSQ
Trigger: CTGACTATCTCTTGAGTCCCAAGGCTCCAATTGAGC...CCATCTTGTGAGACTTGGTGTTAATAGCTGAAGTCCTATCTGTACCAACAAGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519565.5
CDS-3UTR CCA 90 bp GTCTCACAAGATGGCCTGGAAGGAGGTGCAGAGTTCAAAGACAGTCCAAGCAATAGTTGGTCATATACTTaGGTGGTAAGGTTGAAAGAT +
Preference number: 4 (lower is better)
Translates to: VSQDGLEGGAEFKDSPSNSWSYT*VVRLKD
Trigger: ATCTTTCAACCTTACCACCCAAGTATATGACCAACT...ATTGCTTGGACTGTCTTTGAACTCTGCACCTCCTTCCAGGCCATCTTGTGAGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519565.5
CDS-3UTR TCA 90 bp GGTGCAGAGTTCAAAGACAGTCCAAGCAATTCTCAGAAGAGGCGTGCTCAGAATAGAAGTACTTATACTTaGTGGAGTCTTCATGCGTTA +
Preference number: 4 (lower is better)
Translates to: GAEFKDSPSNSQKRRAQNRSTYT*WSLHAL
Trigger: TAACGCATGAAGACTCCATCAAGTATAAGTACTTCT...ATTCTGAGCACGCCTCTTCTGAGAATTGCTTGGACTGTCTTTGAACTCTGCACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359704.2
ENST00000368414.6
ENST00000519565.5
ENST00000560949.5
CDS-3UTR TCA 90 bp TGTTTTTCAAGATGTGACTCACAGATGGGTGTACCCTTTGGTATCGCTCCTACTTTTGTATTTGCTTTCTaGTCTGGAAGGGGTGGGAAT +
Preference number: 4 (lower is better)
Translates to: CFSRCDSQMGVPFGIAPTFVFAF*SGRGGN
Trigger: ATTCCCACCCCTTCCAGATCAGAAAGCAAATACAAA...AGTAGGAGCGATACCAAAGGGTACACCCATCTGTGAGTCACATCTTGAAAAACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000359704.2
ENST00000368414.6
ENST00000519565.5
ENST00000560949.5
CDS-3UTR TCA 90 bp TGGCCTTGCTTGTTGGTACAGATAGGACTTCAGCTATTAACACCAAGTCTCACATGCATCCAAATATACTaGGGTTTGATGTGTGGTCTC +
Preference number: 4 (lower is better)
Translates to: WPCLLVQIGLQLLTPSLTCIQIY*GLMCGL
Trigger: GAGACCACACATCAAACCTCAGTATATTTGGATGCA...TGTGAGACTTGGTGTTAATAGCTGAAGTCCTATCTGTACCAACAAGCAAGGCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359704.2
ENST00000368414.6
ENST00000519565.5
ENST00000560949.5
CDS-3UTR TCA 90 bp TCTGAAAAGTGGCCTTGCTTGTTGGTACAGATAGGACTTCAGCTATTAACACCAACCAGCTTAGCTGGATaGAATCATCTGCATGTTACC +
Preference number: 4 (lower is better)
Translates to: SEKWPCLLVQIGLQLLTPTSLAG*NHLHVT
Trigger: GGTAACATGCAGATGATTTCATCCAGCTAAGCTGGT...TGGTGTTAATAGCTGAAGTCCTATCTGTACCAACAAGCAAGGCCACTTTTCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359704.2
ENST00000368414.6
ENST00000519565.5
ENST00000560949.5
CDS-3UTR TCA 90 bp TGTTTTTCAAGATGTGACTCACAGATGGGTGTACCCTTTGGTATCGCTCCTACTTTCATTTCATTACAGTaGAAGGAGTTACGGGCGAGA +
Preference number: 4 (lower is better)
Translates to: CFSRCDSQMGVPFGIAPTFISLQ*KELRAR
Trigger: TCTCGCCCGTAACTCCTTTCACTGTAATGAAATGAA...AGTAGGAGCGATACCAAAGGGTACACCCATCTGTGAGTCACATCTTGAAAAACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000519565.5
CDS-3UTR TCA 90 bp GGTGCAGAGTTCAAAGACAGTCCAAGCAATTCTCAGAAGAGGCGTGCTCAGAATAACTGGTCAAATTCCTaGAGTACCATACAGTTACTT +
Preference number: 4 (lower is better)
Translates to: GAEFKDSPSNSQKRRAQNNWSNS*STIQLL
Trigger: AAGTAACTGTATGGTACTTCAGGAATTTGACCAGTT...ATTCTGAGCACGCCTCTTCTGAGAATTGCTTGGACTGTCTTTGAACTCTGCACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519565.5
CDS-3UTR GCA 90 bp TTGAAAGATAAAAGAATTATACTGCTGGGGCCACAGATTATAATAGGTGCATTCGCATTCCTCTGCCCATaGTCAATTTCGCTGGCCCAG +
Preference number: 4 (lower is better)
Translates to: LKDKRIILLGPQIIIGAFAFLCP*SISLAQ
Trigger: CTGGGCCAGCGAAATTGAGCATGGGCAGAGGAATGC...GAATGCACCTATTATAATCTGTGGCCCCAGCAGTATAATTCTTTTATCTTTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359704.2
ENST00000368414.6
ENST00000519565.5
ENST00000560949.5
CDS-3UTR GCA 90 bp AGAGTTCAAAGACAGTCCAAGCAATTCTCAGAAGAGGCGTGCTCAGAATTCTTAATACCATGTTGGGAGTaGACCATAGCTAGAGGCATT +
Preference number: 4 (lower is better)
Translates to: RVQRQSKQFSEEACSEFLIPCWE*TIARGI
Trigger: AATGCCTCTAGCTATGGTGCACTCCCAACATGGTAT...TAAGAATTCTGAGCACGCCTCTTCTGAGAATTGCTTGGACTGTCTTTGAACTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359704.2
ENST00000368414.6
ENST00000519565.5
ENST00000560949.5
CDS-3UTR GCA 90 bp GTTACGGGCGAGACAGAATTTATCCCACACTTGGCCAAGATGGGAAGAAGACTGGGTGACAAAAATATATaGAAAAGGGTCTTCACTCTT +
Preference number: 4 (lower is better)
Translates to: VTGETEFIPHLAKMGRRLGDKNI*KRVFTL
Trigger: AAGAGTGAAGACCCTTTTGCATATATTTTTGTCACC...CAGTCTTCTTCCCATCTTGGCCAAGTGTGGGATAAATTCTGTCTCGCCCGTAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000519565.5
CDS-3UTR GCA 90 bp TGTGACTCACAGATGGGTGTACCCTTTGGTATCGCTCCTACTCCAACCAGCTTAGGTGACAAAAATATATaGAAAAGGGTCTTCACTCTT +
Preference number: 4 (lower is better)
Translates to: CDSQMGVPFGIAPTPTSLGDKNI*KRVFTL
Trigger: AAGAGTGAAGACCCTTTTGCATATATTTTTGTCACC...TAAGCTGGTTGGAGTAGGAGCGATACCAAAGGGTACACCCATCTGTGAGTCACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000519565.5
ENST00000560949.5
CDS-3UTR CCA 90 bp TGGCCTTGCTTGTTGGTACAGATAGGACTTCAGCTATTAACACCAAGTCTCACATGGCAGGTAGGGCACTaGATTTTGTATTTGCTTTCT +
Preference number: 4 (lower is better)
Translates to: WPCLLVQIGLQLLTPSLTWQVGH*ILYLLS
Trigger: AGAAAGCAAATACAAAATCCAGTGCCCTACCTGCCA...TGTGAGACTTGGTGTTAATAGCTGAAGTCCTATCTGTACCAACAAGCAAGGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359704.2
ENST00000368414.6
ENST00000519565.5
ENST00000560949.5
CDS-3UTR CCA 90 bp GATCTGTTCATCACAAAGAACAAAGATCTTAGTCTCAGTACAGGGTGCCATACTCATGCTCAATTTCGCTaGCCCAGTGACGCAACAATT +
Preference number: 4 (lower is better)
Translates to: DLFITKNKDLSLSTGCHTHAQFR*PSDATI
Trigger: AATTGTTGCGTCACTGGGCCAGCGAAATTGAGCATG...AGTATGGCACCCTGTACTGAGACTAAGATCTTTGTTCTTTGTGATGAACAGATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432158.6
CDS-3UTR CCA 90 bp TTGGTACAGATAGGACTTCAGCTATTAACACCAAGTCTCACAAGATGGCCTGGATCCAACCAGCTTAGCTaGATGAAATCATCTGCATGT +
Preference number: 4 (lower is better)
Translates to: LVQIGLQLLTPSLTRWPGSNQLS*MKSSAC
Trigger: ACATGCAGATGATTTCATCCAGCTAAGCTGGTTGGA...TCCAGGCCATCTTGTGAGACTTGGTGTTAATAGCTGAAGTCCTATCTGTACCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359704.2
ENST00000368414.6
ENST00000519565.5
ENST00000560949.5
CDS-3UTR CCA 90 bp ATTAACACCAAGTCTCACAAGATGGCCTGGAAGGAGGTGCAGAGTTCAAAGACAAAGCTTAATACTCCTTaGGGTGACGTTGCACAAATT +
Preference number: 4 (lower is better)
Translates to: INTKSHKMAWKEVQSSKTKLNTP*GDVAQI
Trigger: AATTTGTGCAACGTCACCCCAAGGAGTATTAAGCTT...TGTCTTTGAACTCTGCACCTCCTTCCAGGCCATCTTGTGAGACTTGGTGTTAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519565.5
ENST00000560949.5
CDS-3UTR CCA 90 bp AGACTGACCCTCGCACTAATCTCCTTAAATGAGGTCTCTCTGGGAGGTAGCGATTCTGTTTCTTGGATTTaGATGAAGTCAACCAAAGTT +
Preference number: 4 (lower is better)
Translates to: RLTLALISLNEVSLGGSDSVSWI*MKSTKV
Trigger: AACTTTGGTTGACTTCATCCAAATCCAAGAAACAGA...ATCGCTACCTCCCAGAGAGACCTCATTTAAGGAGATTAGTGCGAGGGTCAGTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519565.5
CDS-3UTR CCA 90 bp CTCTGTTTCTTGGATTTGGATGAAGTCAACCAAAGTTACAGCCTTACAATTAGTCACACTTGGCCAAGATaGGAAGAAGACTGCAGAGGC +
Preference number: 4 (lower is better)
Translates to: LCFLDLDEVNQSYSLTISHTWPR*EEDCRG
Trigger: GCCTCTGCAGTCTTCTTCCCATCTTGGCCAAGTGTG...ACTAATTGTAAGGCTGTAACTTTGGTTGACTTCATCCAAATCCAAGAAACAGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519565.5
CDS-3UTR CCA 90 bp ATGTGGAAAAATAGTGTAGCGGCATGGAACTGGGTAAGTACAAGGTTACTGGGCCATTTCAGCAATTTCTaGGGTCCTTTAACACTCAAG +
Preference number: 4 (lower is better)
Translates to: MWKNSVAAWNWVSTRLLGHFSNF*GPLTLK
Trigger: CTTGAGTGTTAAAGGACCCCAGAAATTGCTGAAATG...GCCCAGTAACCTTGTACTTACCCAGTTCCATGCCGCTACACTATTTTTCCACAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000519565.5
CDS-3UTR TCA 90 bp AAAACAATAAAGCAGACCATGGGAAAGATCACTCTCAATAGTTGGGAGAGATTTATTTCGCTGGCCCAGTaGCGCAACAATTTGTCTCCT +
Preference number: 4 (lower is better)
Translates to: KTIKQTMGKITLNSWERFISLAQ*RNNLSP
Trigger: AGGAGACAAATTGTTGCGTCACTGGGCCAGCGAAAT...AAATCTCTCCCAACTATTGAGAGTGATCTTTCCCATGGTCTGCTTTATTGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519565.5
CDS-3UTR GCA 90 bp CTATTAACACCAAGTCTCACAAGATGGCCTGGAAGGAGGTGCAGAGTTCAAAGATTATCTTTACTCAAGTaGTGGCAATGGACACTGTAT +
Preference number: 4 (lower is better)
Translates to: LLTPSLTRWPGRRCRVQRLSLLK*WQWTLY
Trigger: ATACAGTGTCCATTGCCAGCACTTGAGTAAAGATAA...TCTTTGAACTCTGCACCTCCTTCCAGGCCATCTTGTGAGACTTGGTGTTAATAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359704.2
CDS-3UTR GCA 90 bp AACAAGATGTTGCTTGTACCAAAAGGTTTGACCCCTCTCTTCTTACTCCACATAATACCATGTTGGGAGTaGACCATAGCTAGAGGCATT +
Preference number: 4 (lower is better)
Translates to: NKMLLVPKGLTPLFLLHIIPCWE*TIARGI
Trigger: AATGCCTCTAGCTATGGTGCACTCCCAACATGGTAT...TATGTGGAGTAAGAAGAGAGGGGTCAAACCTTTTGGTACAAGCAACATCTTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519565.5
CDS-3UTR GCA 90 bp GGTGCAGAGTTCAAAGACAGTCCAAGCAATTCTCAGAAGAGGCGTGCTCAGAATAAAATGAAAAACCTGTaGAACACAGTGCACACTATT +
Preference number: 4 (lower is better)
Translates to: GAEFKDSPSNSQKRRAQNKMKNL*NTVHTI
Trigger: AATAGTGTGCACTGTGTTGCACAGGTTTTTCATTTT...ATTCTGAGCACGCCTCTTCTGAGAATTGCTTGGACTGTCTTTGAACTCTGCACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000519565.5
ENST00000560949.5
CDS-3UTR CCA 90 bp AGAGTTCAAAGACAGTCCAAGCAATTCTCAGAAGAGGCGTGCTCAGAATTCTTAATCCCTTTCTTGAACTaGTTTATGGGTGTGGATGAG +
Preference number: 4 (lower is better)
Translates to: RVQRQSKQFSEEACSEFLIPFLN*FMGVDE
Trigger: CTCATCCACACCCATAAACCAGTTCAAGAAAGGGAT...TAAGAATTCTGAGCACGCCTCTTCTGAGAATTGCTTGGACTGTCTTTGAACTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359704.2
CDS-3UTR CCA 90 bp TTTTCAAGATGTGACTCACAGATGGGTGTACCCTTTGGTATCGCTCCTACTCCACATTTGATTTCTACTTaGCCAAGTTGTACCTTCATC +
Preference number: 4 (lower is better)
Translates to: FSRCDSQMGVPFGIAPTPHLIST*PSCTFI
Trigger: GATGAAGGTACAACTTGGCCAAGTAGAAATCAAATG...TGGAGTAGGAGCGATACCAAAGGGTACACCCATCTGTGAGTCACATCTTGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359704.2
CDS-3UTR CCA 90 bp ATAAATCCACCCCAAGTCCAAGCTGTAGGACGTTTTGCTGAAACAAAGACCATATCCAACCAGCTTAGCTaGATGAAATCATCTGCATGT +
Preference number: 4 (lower is better)
Translates to: INPPQVQAVGRFAETKTISNQLS*MKSSAC
Trigger: ACATGCAGATGATTTCATCCAGCTAAGCTGGTTGGA...TATGGTCTTTGTTTCAGCAAAACGTCCTACAGCTTGGACTTGGGGTGGATTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519565.5
CDS-3UTR CCA 90 bp CTCCCAAAAGTTACTACTACTGTTTTACCTTCAAAGTTGGCACTGACATATAAACCAAGTCTCACAAGATaGCCTGGAAGGAGGTGCAGA +
Preference number: 4 (lower is better)
Translates to: LPKVTTTVLPSKLALTYKPSLTR*PGRRCR
Trigger: TCTGCACCTCCTTCCAGGCCATCTTGTGAGACTTGG...TTTATATGTCAGTGCCAACTTTGAAGGTAAAACAGTAGTAGTAACTTTTGGGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519565.5
ENST00000560949.5
CDS-3UTR CCA 90 bp TCAATACGGCCAAGTTCCAAGAAGTACTTATACTTGATGGAGTCTTCATGCGTTAATAGTGTAGCGGCATaGAACTGGGTAAGTACAAGG +
Preference number: 4 (lower is better)
Translates to: SIRPSSKKYLYLMESSCVNSVAA*NWVSTR
Trigger: CCTTGTACTTACCCAGTTCCATGCCGCTACACTATT...AACGCATGAAGACTCCATCAAGTATAAGTACTTCTTGGAACTTGGCCGTATTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519565.5
CDS-3UTR CCA 90 bp TGTTTTTCAAGATGTGACTCACAGATGGGTGTACCCTTTGGTATCGCTCCTACTACAACAAAAGGTCATTaGGACATTACGAAAAGTCGG +
Preference number: 4 (lower is better)
Translates to: CFSRCDSQMGVPFGIAPTTTKGH*DITKSR
Trigger: CCGACTTTTCGTAATGTCCCAATGACCTTTTGTTGT...AGTAGGAGCGATACCAAAGGGTACACCCATCTGTGAGTCACATCTTGAAAAACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000519565.5
3UTR CAA 72 bp TCACTACCAGAGCTAAATTCTGGAGTGCGTTCAGTGTaGAATTCATTTCATTACAGTGAAAGGAGTTACGGG +
Preference number: 4 (lower is better)
Translates to: SLPELNSGVRSV*NSFHYSERSYG
Trigger: CCCGTAACTCCTTTCACTGTAATGAAATGAATTCAACACTGAACGCACTCCAGAATTTAGCTCTGGTAGTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519565.5
ENST00000521654.6
CDS-3UTR TCA 90 bp TGTTTTTCAAGATGTGACTCACAGATGGGTGTACCCTTTGGTATCGCTCCTACTAATTCACATTTGTCCTaGCCATATTTCACTCTCTAC +
Preference number: 4 (lower is better)
Translates to: CFSRCDSQMGVPFGIAPTNSHLS*PYFTLY
Trigger: GTAGAGAGTGAAATATGGTCAGGACAAATGTGAATT...AGTAGGAGCGATACCAAAGGGTACACCCATCTGTGAGTCACATCTTGAAAAACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359704.2
ENST00000368414.6
CDS-3UTR TCA 90 bp TGTTTTTCAAGATGTGACTCACAGATGGGTGTACCCTTTGGTATCGCTCCTACTAGAAGTACTTATACTTaGTGGAGTCTTCATGCGTTA +
Preference number: 4 (lower is better)
Translates to: CFSRCDSQMGVPFGIAPTRSTYT*WSLHAL
Trigger: TAACGCATGAAGACTCCATCAAGTATAAGTACTTCT...AGTAGGAGCGATACCAAAGGGTACACCCATCTGTGAGTCACATCTTGAAAAACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359704.2
ENST00000368414.6
ENST00000519565.5
ENST00000560949.5
CDS-3UTR TCA 90 bp AGAGTTCAAAGACAGTCCAAGCAATTCTCAGAAGAGGCGTGCTCAGAATTCTTATCCTACTGTCTCCACTaGAATATATGTATCAGTTGC +
Preference number: 4 (lower is better)
Translates to: RVQRQSKQFSEEACSEFLSYCLH*NICISC
Trigger: GCAACTGATACATATATTTCAGTGGAGACAGTAGGA...TAAGAATTCTGAGCACGCCTCTTCTGAGAATTGCTTGGACTGTCTTTGAACTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519565.5
CDS-3UTR TCA 90 bp TCGGAGCTGGCGGTATCTCTCACCACATCGGTAACAAAAATTAGTGTTACATTGTTTCTTGGATTTGGATaGAGTCAACCAAAGTTACAG +
Preference number: 4 (lower is better)
Translates to: SELAVSLTTSVTKISVTLFLGFG*SQPKLQ
Trigger: CTGTAACTTTGGTTGACTTCATCCAAATCCAAGAAA...CAATGTAACACTAATTTTTGTTACCGATGTGGTGAGAGATACCGCCAGCTCCGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000519565.5
CDS-3UTR TCA 90 bp TTGGTACAGATAGGACTTCAGCTATTAACACCAAGTCTCACAAGATGGCCTGGATGCAATCTAATGAAATaGTGGACAAGATCTGGTACA +
Preference number: 4 (lower is better)
Translates to: LVQIGLQLLTPSLTRWPGCNLMK*WTRSGT
Trigger: TGTACCAGATCTTGTCCATCATTTCATTAGATTGCA...TCCAGGCCATCTTGTGAGACTTGGTGTTAATAGCTGAAGTCCTATCTGTACCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519565.5
CDS-3UTR GCA 90 bp TTGAAAGATAAAAGAATTATACTGCTGGGGCCACAGATTATAATAGGTGCATTCTTCTGGGCATTCCTCTaGCCATGCTCAATTTCGCTG +
Preference number: 4 (lower is better)
Translates to: LKDKRIILLGPQIIIGAFFWAFL*PCSISL
Trigger: CAGCGAAATTGAGCATGGGCAGAGGAATGCCCAGAA...GAATGCACCTATTATAATCTGTGGCCCCAGCAGTATAATTCTTTTATCTTTCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359704.2
ENST00000368414.6
ENST00000519565.5
ENST00000560949.5
CDS-3UTR GCA 90 bp TTGAAAGATAAAAGAATTATACTGCTGGGGCCACAGATTATAATAGGTGCATTCGCTGGATGTGGATCTTaGACTTTGGACACTTCTGGG +
Preference number: 4 (lower is better)
Translates to: LKDKRIILLGPQIIIGAFAGCGS*TLDTSG
Trigger: CCCAGAAGTGTCCAAAGTGCAAGATCCACATCCAGC...GAATGCACCTATTATAATCTGTGGCCCCAGCAGTATAATTCTTTTATCTTTCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359704.2
ENST00000368414.6
ENST00000519565.5
ENST00000560949.5
CDS-3UTR GCA 90 bp TCGGAGCTGGCGGTATCTCTCACCACATCGGTAACAAAAATTAGTGTTACATTGGAAACCACTTCATCCTaGCATTTTGTTTGTATTTGC +
Preference number: 4 (lower is better)
Translates to: SELAVSLTTSVTKISVTLETTSS*HFVCIC
Trigger: GCAAATACAAACAAAATGGCAGGATGAAGTGGTTTC...CAATGTAACACTAATTTTTGTTACCGATGTGGTGAGAGATACCGCCAGCTCCGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000432158.6
CDS-3UTR CCA 90 bp TGGCCTTGCTTGTTGGTACAGATAGGACTTCAGCTATTAACACCAAGTCTCACAACTGGTTTATGGGTGTaGATGAGAAGAGAACTAATT +
Preference number: 4 (lower is better)
Translates to: WPCLLVQIGLQLLTPSLTTGLWV*MRRELI
Trigger: AATTAGTTCTCTTCTCATCCACACCCATAAACCAGT...TGTGAGACTTGGTGTTAATAGCTGAAGTCCTATCTGTACCAACAAGCAAGGCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359704.2
CDS-3UTR CCA 90 bp CATTTGAAAGATAAAAGAATTATACTGCTGGGGCCACAGATTATAATAGGTGCAACTGAGGACATGGCTTaGTGCTGGAATCAATACGGC +
Preference number: 4 (lower is better)
Translates to: HLKDKRIILLGPQIIIGATEDMA*CWNQYG
Trigger: GCCGTATTGATTCCAGCACCAAGCCATGTCCTCAGT...TGCACCTATTATAATCTGTGGCCCCAGCAGTATAATTCTTTTATCTTTCAAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359704.2
ENST00000368414.6
ENST00000519565.5
ENST00000560949.5
CDS-3UTR CCA 90 bp TCTCAGTGTTTTTCAAGATGTGACTCACAGATGGGTGTACCCTTTGGTATCGCTAGGTCTATGAAAATGTaGAAAAATAGTGTAGCGGCA +
Preference number: 4 (lower is better)
Translates to: SQCFSRCDSQMGVPFGIARSMKM*KNSVAA
Trigger: TGCCGCTACACTATTTTTCCACATTTTCATAGACCT...AGCGATACCAAAGGGTACACCCATCTGTGAGTCACATCTTGAAAAACACTGAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000368414.6
ENST00000519565.5
ENST00000560949.5
CDS-3UTR CCA 90 bp ACAGATAGGACTTCAGCTATTAACACCAAGTCTCACAAGATGGCCTGGAAGGAGAAATGTACAACCTTATaGATATGTTCATGCAAGGTG +
Preference number: 4 (lower is better)
Translates to: TDRTSAINTKSHKMAWKEKCTTL*ICSCKV
Trigger: CACCTTGCATGAACATATCCATAAGGTTGTACATTT...CTCCTTCCAGGCCATCTTGTGAGACTTGGTGTTAATAGCTGAAGTCCTATCTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519565.5
ENST00000560949.5
CDS-3UTR TCA 90 bp TTGCTTGTTGGTACAGATAGGACTTCAGCTATTAACACCAAGTCTCACAAGATGATTAGTGTTACATTGTaGGCAGGTCATATGGTCACA +
Preference number: 4 (lower is better)
Translates to: LLVGTDRTSAINTKSHKMISVTL*AGHMVT
Trigger: TGTGACCATATGACCTGCTCACAATGTAACACTAAT...CATCTTGTGAGACTTGGTGTTAATAGCTGAAGTCCTATCTGTACCAACAAGCAA
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359704.2
ENST00000368414.6
ENST00000519565.5
ENST00000560949.5
CDS-3UTR TCA 90 bp CTGCTGGGGCCACAGATTATAATAGGTGCATTCAGTGAACTCTTATCTTCTGAAGAAACCTTACTCTTATaGCAGGTTAGAAATTCTCCT +
Preference number: 4 (lower is better)
Translates to: LLGPQIIIGAFSELLSSEETLLL*QVRNSP
Trigger: AGGAGAATTTCTAACCTGTCATAAGAGTAAGGTTTC...TTCAGAAGATAAGAGTTCACTGAATGCACCTATTATAATCTGTGGCCCCAGCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519565.5
ENST00000560949.5
CDS-3UTR GCA 90 bp TTGAAAGATAAAAGAATTATACTGCTGGGGCCACAGATTATAATAGGTGCATTCTCTGCATGTTACCAGTaGATACCTGTCCGTGATCGT +
Preference number: 4 (lower is better)
Translates to: LKDKRIILLGPQIIIGAFSACYQ*IPVRDR
Trigger: ACGATCACGGACAGGTATGCACTGGTAACATGCAGA...GAATGCACCTATTATAATCTGTGGCCCCAGCAGTATAATTCTTTTATCTTTCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359704.2
ENST00000368414.6
ENST00000519565.5
ENST00000560949.5
CDS-3UTR GCA 90 bp CATTTGAAAGATAAAAGAATTATACTGCTGGGGCCACAGATTATAATAGGTGCATCTGCATGTTACCAGTaGATACCTGTCCGTGATCGT +
Preference number: 4 (lower is better)
Translates to: HLKDKRIILLGPQIIIGASACYQ*IPVRDR
Trigger: ACGATCACGGACAGGTATGCACTGGTAACATGCAGA...TGCACCTATTATAATCTGTGGCCCCAGCAGTATAATTCTTTTATCTTTCAAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359704.2
ENST00000368414.6
ENST00000519565.5
ENST00000560949.5
CDS-3UTR GCA 90 bp TCTCAGTGTTTTTCAAGATGTGACTCACAGATGGGTGTACCCTTTGGTATCGCTAAGGGTCTTCACTCTTaGTTTCTTTGTAATAGAGAA +
Preference number: 4 (lower is better)
Translates to: SQCFSRCDSQMGVPFGIAKGLHS*FLCNRE
Trigger: TTCTCTATTACAAAGAAAGCAAGAGTGAAGACCCTT...AGCGATACCAAAGGGTACACCCATCTGTGAGTCACATCTTGAAAAACACTGAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000519565.5
ENST00000560949.5
CDS-3UTR GCA 90 bp TGTTTTTCAAGATGTGACTCACAGATGGGTGTACCCTTTGGTATCGCTCCTACTAAGGGTCTTCACTCTTaGTTTCTTTGTAATAGAGAA +
Preference number: 4 (lower is better)
Translates to: CFSRCDSQMGVPFGIAPTKGLHS*FLCNRE
Trigger: TTCTCTATTACAAAGAAAGCAAGAGTGAAGACCCTT...AGTAGGAGCGATACCAAAGGGTACACCCATCTGTGAGTCACATCTTGAAAAACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000519565.5
ENST00000560949.5
CDS-3UTR GCA 90 bp ATCTCCTTAAATGAGGTCTCTCTGGGAGGTAGCGATATTTGCATCCAAATATACAATGACAGCATAGCTTaGCAGCCACAAGAATCTAAA +
Preference number: 4 (lower is better)
Translates to: ISLNEVSLGGSDICIQIYNDSIA*QPQESK
Trigger: TTTAGATTCTTGTGGCTGGCAAGCTATGCTGTCATT...GTATATTTGGATGCAAATATCGCTACCTCCCAGAGAGACCTCATTTAAGGAGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519565.5
CDS-3UTR CCA 90 bp ATTCTGTGTTATTCAGAAAGAATGAAAGCATGCTGGATTGTTATTCACGCAAGTTCAGTTCGCTGGATGTaGATCTTGCACTTTGGACAC +
Preference number: 4 (lower is better)
Translates to: ILCYSERMKACWIVIHASSVRWM*ILHFGH
Trigger: GTGTCCAAAGTGCAAGATCCACATCCAGCGAACTGA...ACTTGCGTGAATAACAATCCAGCATGCTTTCATTCTTTCTGAATAACACAGAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519565.5
ENST00000560949.5
CDS-3UTR CCA 90 bp TCTCAGTGTTTTTCAAGATGTGACTCACAGATGGGTGTACCCTTTGGTATCGCTTGTTATTCAGCCCGTTaGTATATATGTATATGGCAT +
Preference number: 4 (lower is better)
Translates to: SQCFSRCDSQMGVPFGIACYSAR*YICIWH
Trigger: ATGCCATATACATATATACCAACGGGCTGAATAACA...AGCGATACCAAAGGGTACACCCATCTGTGAGTCACATCTTGAAAAACACTGAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000519565.5
ENST00000560949.5
CDS-3UTR CCA 90 bp TTGGTACAGATAGGACTTCAGCTATTAACACCAAGTCTCACAAGATGGCCTGGATGTTATTCAGCCCGTTaGTATATATGTATATGGCAT +
Preference number: 4 (lower is better)
Translates to: LVQIGLQLLTPSLTRWPGCYSAR*YICIWH
Trigger: ATGCCATATACATATATACCAACGGGCTGAATAACA...TCCAGGCCATCTTGTGAGACTTGGTGTTAATAGCTGAAGTCCTATCTGTACCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519565.5
ENST00000560949.5
CDS-3UTR CCA 90 bp TTGAAAGATAAAAGAATTATACTGCTGGGGCCACAGATTATAATAGGTGCATTCAATAGTGTAGCGGCATaGAACTGGGTAAGTACAAGG +
Preference number: 4 (lower is better)
Translates to: LKDKRIILLGPQIIIGAFNSVAA*NWVSTR
Trigger: CCTTGTACTTACCCAGTTCCATGCCGCTACACTATT...GAATGCACCTATTATAATCTGTGGCCCCAGCAGTATAATTCTTTTATCTTTCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368414.6
ENST00000519565.5
ENST00000560949.5
CDS-3UTR CCA 90 bp TCAATACGGCCAAGTTCCAAGAAGTACTTATACTTGATGGAGTCTTCATGCGTTCATTTGATTTCTACTTaGCCAAGTTGTACCTGTAGT +
Preference number: 4 (lower is better)
Translates to: SIRPSSKKYLYLMESSCVHLIST*PSCTCS
Trigger: ACTACAGGTACAACTTGGCCAAGTAGAAATCAAATG...AACGCATGAAGACTCCATCAAGTATAAGTACTTCTTGGAACTTGGCCGTATTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519565.5
CDS-3UTR CCA 90 bp TCAATACGGCCAAGTTCCAAGAAGTACTTATACTTGATGGAGTCTTCATGCGTTAGAATGAAAGCATGCTaGATTGTTATTCACGCAAGT +
Preference number: 4 (lower is better)
Translates to: SIRPSSKKYLYLMESSCVRMKAC*IVIHAS
Trigger: ACTTGCGTGAATAACAATCCAGCATGCTTTCATTCT...AACGCATGAAGACTCCATCAAGTATAAGTACTTCTTGGAACTTGGCCGTATTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519565.5
CDS-3UTR TCA 90 bp CATTTGAAAGATAAAAGAATTATACTGCTGGGGCCACAGATTATAATAGGTGCATGCATCCAAATATACTaGGGTTTGATGTGTGGTCTC +
Preference number: 4 (lower is better)
Translates to: HLKDKRIILLGPQIIIGACIQIY*GLMCGL
Trigger: GAGACCACACATCAAACCTCAGTATATTTGGATGCA...TGCACCTATTATAATCTGTGGCCCCAGCAGTATAATTCTTTTATCTTTCAAATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359704.2
ENST00000368414.6
ENST00000519565.5
ENST00000560949.5
CDS-3UTR TCA 90 bp CATTTGAAAGATAAAAGAATTATACTGCTGGGGCCACAGATTATAATAGGTGCAATCAGGGACTGGAAATaGTTACAGTGGTTCATAGGT +
Preference number: 4 (lower is better)
Translates to: HLKDKRIILLGPQIIIGAIRDWK*LQWFIG
Trigger: ACCTATGAACCACTGTAATCATTTCCAGTCCCTGAT...TGCACCTATTATAATCTGTGGCCCCAGCAGTATAATTCTTTTATCTTTCAAATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519565.5
CDS-3UTR GCA 90 bp CATTTGAAAGATAAAAGAATTATACTGCTGGGGCCACAGATTATAATAGGTGCATCTGAAAAGTGGCCTTaGTTGTTGGTACAGATAGGA +
Preference number: 4 (lower is better)
Translates to: HLKDKRIILLGPQIIIGASEKWP*LLVQIG
Trigger: TCCTATCTGTACCAACAAGCAAGGCCACTTTTCAGA...TGCACCTATTATAATCTGTGGCCCCAGCAGTATAATTCTTTTATCTTTCAAATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000359704.2
ENST00000368414.6
ENST00000519565.5
ENST00000560949.5
CDS-3UTR CCA 90 bp TTGCTTGTTGGTACAGATAGGACTTCAGCTATTAACACCAAGTCTCACAAGATGCATTTGATTTCTACTTaGCCAAGTTGTACACTGTAT +
Preference number: 4 (lower is better)
Translates to: LLVGTDRTSAINTKSHKMHLIST*PSCTLY
Trigger: ATACAGTGTACAACTTGGCCAAGTAGAAATCAAATG...CATCTTGTGAGACTTGGTGTTAATAGCTGAAGTCCTATCTGTACCAACAAGCAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368414.6
CDS-3UTR CCA 90 bp GATATGTTCATGCAAGGTGACAAAAATATATGCAAAAGGGTCTTCACTCTTGCTAAGCTTAATACTCCTTaGGGTGACGTTGCACAAATT +
Preference number: 4 (lower is better)
Translates to: DMFMQGDKNICKRVFTLAKLNTP*GDVAQI
Trigger: AATTTGTGCAACGTCACCCCAAGGAGTATTAAGCTT...AGCAAGAGTGAAGACCCTTTTGCATATATTTTTGTCACCTTGCATGAACATATC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000519565.5
ENST00000560949.5
CDS-3UTR CCA 90 bp GATATGTTCATGCAAGGTGACAAAAATATATGCAAAAGGGTCTTCACTCTTGCTGGCAAGGTATTTATTTaGCTAATCAGGCAGAAAGGA +
Preference number: 4 (lower is better)
Translates to: DMFMQGDKNICKRVFTLAGKVFI*LIRQKG
Trigger: TCCTTTCTGCCTGATTAGCCAAATAAATACCTTGCC...AGCAAGAGTGAAGACCCTTTTGCATATATTTTTGTCACCTTGCATGAACATATC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000519565.5
ENST00000560949.5
CDS-3UTR CCA 90 bp CATTTGAAAGATAAAAGAATTATACTGCTGGGGCCACAGATTATAATAGGTGCAAATTTATCCCACACTTaGCCAAGATGGGAAGAAGAC +
Preference number: 4 (lower is better)
Translates to: HLKDKRIILLGPQIIIGANLSHT*PRWEED
Trigger: GTCTTCTTCCCATCTTGGCCAAGTGTGGGATAAATT...TGCACCTATTATAATCTGTGGCCCCAGCAGTATAATTCTTTTATCTTTCAAATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519565.5
CDS-3UTR CCA 90 bp ATTCTGTGTTATTCAGAAAGAATGAAAGCATGCTGGATTGTTATTCACGCAAGTACCAGAGCTAAATTCTaGAGTGCGTTCAGTGTTGAA +
Preference number: 4 (lower is better)
Translates to: ILCYSERMKACWIVIHASTRAKF*SAFSVE
Trigger: TTCAACACTGAACGCACTCCAGAATTTAGCTCTGGT...ACTTGCGTGAATAACAATCCAGCATGCTTTCATTCTTTCTGAATAACACAGAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519565.5
3UTR CAA 72 bp GTCAGTTTACAAAGCTTAATACTCCTTGGGGTGACGTaGCACAAATTTCTGTGTTTGTGTGACAAAAAGAAA +
Preference number: 4 (lower is better)
Translates to: VSLQSLILLGVT*HKFLCLCDKKK
Trigger: TTTCTTTTTGTCACACAAACACAGAAATTTGTGCAACGTCACCCCAAGGAGTATTAAGCTTTGTAAACTGAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000519565.5
ENST00000521654.6
ENST00000560949.5
CDS-3UTR GCA 90 bp AGAATTATACTGCTGGGGCCACAGATTATAATAGGTGCATTCAGTGAACTCTTATACCCTCTAGAGGATTaGAATTGTGATGAAAATGAT +
Preference number: 4 (lower is better)
Translates to: RIILLGPQIIIGAFSELLYPLED*NCDEND
Trigger: ATCATTTTCATCACAATTGCAATCCTCTAGAGGGTA...TAAGAGTTCACTGAATGCACCTATTATAATCTGTGGCCCCAGCAGTATAATTCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519565.5
CDS-3UTR TCA 90 bp CTCCCAAAAGTTACTACTACTGTTTTACCTTCAAAGTTGGCACTGACATATAAAGAAACCTTACTCTTATaGCAGGTTAGAAATTCTCCT +
Preference number: 4 (lower is better)
Translates to: LPKVTTTVLPSKLALTYKETLLL*QVRNSP
Trigger: AGGAGAATTTCTAACCTGTCATAAGAGTAAGGTTTC...TTTATATGTCAGTGCCAACTTTGAAGGTAAAACAGTAGTAGTAACTTTTGGGAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519565.5
ENST00000560949.5
CDS-3UTR GCA 90 bp ATTCTGTGTTATTCAGAAAGAATGAAAGCATGCTGGATTGTTATTCACGCAAGTAACTTGGGATTGGTGTaGAAAACTGGTAGTTTTGAT +
Preference number: 4 (lower is better)
Translates to: ILCYSERMKACWIVIHASNLGLV*KTGSFD
Trigger: ATCAAAACTACCAGTTTTGCACACCAATCCCAAGTT...ACTTGCGTGAATAACAATCCAGCATGCTTTCATTCTTTCTGAATAACACAGAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519565.5
CDS-3UTR CCA 90 bp ATTCTGTGTTATTCAGAAAGAATGAAAGCATGCTGGATTGTTATTCACGCAAGTAGGTCTATGAAAATGTaGAAAAATAGTGTAGCGGCA +
Preference number: 4 (lower is better)
Translates to: ILCYSERMKACWIVIHASRSMKM*KNSVAA
Trigger: TGCCGCTACACTATTTTTCCACATTTTCATAGACCT...ACTTGCGTGAATAACAATCCAGCATGCTTTCATTCTTTCTGAATAACACAGAAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000519565.5
ENST00000560949.5
3UTR CAA 72 bp CATGTGACACTGTACTTACTGAGAAGGAACAGTACATaGACATATCGACTGAAAATTCTTGAGGTAATAGAT +
Preference number: 4 (lower is better)
Translates to: HVTLYLLRRNST*TYRLKILEVID
Trigger: ATCTATTACCTCAAGAATTTTCAGTCGATATGTCAATGTACTGTTCCTTCTCAGTAAGTACAGTGTCACATG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519565.5
ENST00000521654.6
3UTR CAA 72 bp GAATACACACACAGACACATACACAAACACACTTATTaGTATATTTGTAGAAAGTGTCTGGAAGGACACATA +
Preference number: 4 (lower is better)
Translates to: EYTHRHIHKHTY*YICRKCLEGHI
Trigger: TATGTGTCCTTCCAGACACTTTCTACAAATATACAAATAAGTGTGTTTGTGTATGTGTCTGTGTGTGTATTC
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519565.5
ENST00000521654.6
ENST00000560949.5
CDS-3UTR GCA 90 bp CTCCCAAAAGTTACTACTACTGTTTTACCTTCAAAGTTGGCACTGACATATAAAAAAATGAAAAACCTGTaGAACACAGTGCACACTATT +
Preference number: 4 (lower is better)
Translates to: LPKVTTTVLPSKLALTYKKMKNL*NTVHTI
Trigger: AATAGTGTGCACTGTGTTGCACAGGTTTTTCATTTT...TTTATATGTCAGTGCCAACTTTGAAGGTAAAACAGTAGTAGTAACTTTTGGGAG
34% GC, longest homopolymer 7 nt, total homopolymer stretches 20 nt.
Matches the following 2 transcripts:
ENST00000519565.5
ENST00000560949.5
CDS-3UTR CCA 90 bp ATTCTGTGTTATTCAGAAAGAATGAAAGCATGCTGGATTGTTATTCACGCAAGTAAATGTACAACCTTATaGATATGTTCATGCAAGGTG +
Preference number: 4 (lower is better)
Translates to: ILCYSERMKACWIVIHASKCTTL*ICSCKV
Trigger: CACCTTGCATGAACATATCCATAAGGTTGTACATTT...ACTTGCGTGAATAACAATCCAGCATGCTTTCATTCTTTCTGAATAACACAGAAT
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519565.5
ENST00000560949.5
CDS-3UTR CCA 90 bp TTGAAAGATAAAAGAATTATACTGCTGGGGCCACAGATTATAATAGGTGCATTCATCACCAATTTGGCTTaGGTATTTGATTTAAATCCC +
Preference number: 4 (lower is better)
Translates to: LKDKRIILLGPQIIIGAFITNLA*VFDLNP
Trigger: GGGATTTAAATCAAATACCCAAGCCAAATTGGTGAT...GAATGCACCTATTATAATCTGTGGCCCCAGCAGTATAATTCTTTTATCTTTCAA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519565.5
CDS-3UTR CCA 90 bp ATTCTGTGTTATTCAGAAAGAATGAAAGCATGCTGGATTGTTATTCACGCAAGTACACAAAGCACCATATaGAAGGTTAAAGGGATTATA +
Preference number: 4 (lower is better)
Translates to: ILCYSERMKACWIVIHASTQSTI*KVKGII
Trigger: TATAATCCCTTTAACCTTCCATATGGTGCTTTGTGT...ACTTGCGTGAATAACAATCCAGCATGCTTTCATTCTTTCTGAATAACACAGAAT
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519565.5
CDS GCA 90 bp GGCCTCGGGGGCTCAGGGTGGCCCGCAGTGCCACTGGCCAGGGTCTaGGACTCCTGGGGCCCGCCGCCGCCGCTCACCGTGCTCTGCTCC +
Preference number: 5 (lower is better)
Translates to: GLGGSGWPAVPLARV*DSWGPPPPLTVLCS
Trigger: GGAGCAGAGCACGGTGAGCGGCGGCGGCGGGCCCCAGGAGTCGCAGACCCTGGCCAGTGGCACTGCGGGCCACCCTGAGCCCCCGAGGCC
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000521654.7
ENST00000560949.5
CDS TCA 90 bp TACACGGAGCAGAAGACTTGTCTCTTGGCGAGGGACGGGCGCCGCTaGCCCAGCACGTCCAGGACCAGTCCGTCGGCGGCCCCCACGCGG +
Preference number: 5 (lower is better)
Translates to: YTEQKTCLLARDGRR*PSTSRTSPSAAPTR
Trigger: CCGCGTGGGGGCCGCCGACGGACTGGTCCTGGACGTGCTGGGTCAGCGGCGCCCGTCCCTCGCCAAGAGACAAGTCTTCTGCTCCGTGTA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000521654.7
ENST00000560949.5
CDS CCA 90 bp CGCCGTCGGGGGAGAGGGAATCCGTTGGGAGGGACAGTCGGGGGCTaGGGAAGGAAGAGCGGGTGCTGGGAGGGTTCAACACTGGCGGAG +
Preference number: 5 (lower is better)
Translates to: RRRGRGNPLGGTVGG*GRKSGCWEGSTLAE
Trigger: CTCCGCCAGTGTTGAACCCTCCCAGCACCCGCTCTTCCTTCCCCAGCCCCCGACTGTCCCTCCCAACGGATTCCCTCTCCCCCGACGGCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000521654.7
ENST00000560949.5
CDS GCA 90 bp GCATGGAGAACGGCTCGGGCGCCAGGTAGAACTCCAGCTCGATGCTaGCGCCGTCGGGGGAGAGGGAATCCGTTGGGAGGGACAGTCGGG +
Preference number: 5 (lower is better)
Translates to: AWRTARAPGRTPARC*RRRGRGNPLGGTVG
Trigger: CCCGACTGTCCCTCCCAACGGATTCCCTCTCCCCCGACGGCGGCAGCATCGAGCTGGAGTTCTACCTGGCGCCCGAGCCGTTCTCCATGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000521654.7
ENST00000560949.5
CDS CCA 90 bp GAGGGGCACATAGGGATCCCCTACACCGCCCAGGCCAGAGTAGGGTaGAGCTCCCAACAGGCTGGGCATGGAGAACGGCTCGGGCGCCAG +
Preference number: 5 (lower is better)
Translates to: EGHIGIPYTAQARVG*SSQQAGHGERLGRQ
Trigger: CTGGCGCCCGAGCCGTTCTCCATGCCCAGCCTGTTGGGAGCTCCACCCTACTCTGGCCTGGGCGGTGTAGGGGATCCCTATGTGCCCCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000521654.7
ENST00000560949.5
CDS GCA 90 bp TGGGCATGGAGAACGGCTCGGGCGCCAGGTAGAACTCCAGCTCGATaGTGCCGCCGTCGGGGGAGAGGGAATCCGTTGGGAGGGACAGTC +
Preference number: 5 (lower is better)
Translates to: WAWRTARAPGRTPAR*CRRRGRGNPLGGTV
Trigger: GACTGTCCCTCCCAACGGATTCCCTCTCCCCCGACGGCGGCAGCATCGAGCTGGAGTTCTACCTGGCGCCCGAGCCGTTCTCCATGCCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000521654.7
ENST00000560949.5
CDS CCA 90 bp CACCGCCCAGGCCAGAGTAGGGTGGAGCTCCCAACAGGCTGGGCATaGAGAACGGCTCGGGCGCCAGGTAGAACTCCAGCTCGATGCTGC +
Preference number: 5 (lower is better)
Translates to: HRPGQSRVELPTGWA*RTARAPGRTPARCC
Trigger: GCAGCATCGAGCTGGAGTTCTACCTGGCGCCCGAGCCGTTCTCCATGCCCAGCCTGTTGGGAGCTCCACCCTACTCTGGCCTGGGCGGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000521654.7
ENST00000560949.5
CDS CCA 90 bp CCCCTACACCGCCCAGGCCAGAGTAGGGTGGAGCTCCCAACAGGCTaGGCATGGAGAACGGCTCGGGCGCCAGGTAGAACTCCAGCTCGA +
Preference number: 5 (lower is better)
Translates to: PLHRPGQSRVELPTG*AWRTARAPGRTPAR
Trigger: TCGAGCTGGAGTTCTACCTGGCGCCCGAGCCGTTCTCCATGCCCAGCCTGTTGGGAGCTCCACCCTACTCTGGCCTGGGCGGTGTAGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000521654.7
ENST00000560949.5
CDS CCA 90 bp GCAGGTCGCTCTCCACGCAGTACACGGAGCAGAAGACTTGTCTCTTaGCGAGGGACGGGCGCCGCTGACCCAGCACGTCCAGGACCAGTC +
Preference number: 5 (lower is better)
Translates to: AGRSPRSTRSRRLVS*RGTGAADPARPGPV
Trigger: GACTGGTCCTGGACGTGCTGGGTCAGCGGCGCCCGTCCCTCGCCAAGAGACAAGTCTTCTGCTCCGTGTACTGCGTGGAGAGCGACCTGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000521654.7
ENST00000560949.5
CDS-3UTR CAA 90 bp ATACCATGTTGGGAGTGCACCATAGCTAGAGGCATTGTGGCCCACGGAGAATCAAGGGGCTTGATGGGCTaGTCTTCCAGGCACACCCGG +
Preference number: 5 (lower is better)
Translates to: IPCWECTIARGIVAHGESRGLMG*SSRHTR
Trigger: CCGGGTGTGCCTGGAAGACAAGCCCATCAAGCCCCT...TGATTCTCCGTGGGCCACAATGCCTCTAGCTATGGTGCACTCCCAACATGGTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519565.5
ENST00000560949.5
CDS-3UTR CAA 90 bp GTCTCACAAGATGGCCTGGAAGGAGGTGCAGAGTTCAAAGACAGTCCAAGCAATCAGAAGACTTGTCTCTaGGCGAGGGACGGGCGCCGC +
Preference number: 5 (lower is better)
Translates to: VSQDGLEGGAEFKDSPSNQKTCL*ARDGRR
Trigger: GCGGCGCCCGTCCCTCGCCAAGAGACAAGTCTTCTG...ATTGCTTGGACTGTCTTTGAACTCTGCACCTCCTTCCAGGCCATCTTGTGAGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560949.5
CDS-3UTR CAA 90 bp TGCACCATAGCTAGAGGCATTGTGGCCCACGGAGAATCACTGGGAGATGAGATGCGCTGGATGTGGATCTaGCACTTTGGACACTTCTGG +
Preference number: 5 (lower is better)
Translates to: CTIARGIVAHGESLGDEMRWMWI*HFGHFW
Trigger: CCAGAAGTGTCCAAAGTGCAAGATCCACATCCAGCG...CATCTCATCTCCCAGTGATTCTCCGTGGGCCACAATGCCTCTAGCTATGGTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359704.2
ENST00000368414.6
ENST00000519565.5
ENST00000560949.5
CDS-3UTR CAA 90 bp TCTCAGTGTTTTTCAAGATGTGACTCACAGATGGGTGTACCCTTTGGTATCGCTGGCAAGGTCTGGGGATaGAGAGGCCCGGTGAGTGCC +
Preference number: 5 (lower is better)
Translates to: SQCFSRCDSQMGVPFGIAGKVWG*RGPVSA
Trigger: GGCACTCACCGGGCCTCTCAATCCCCAGACCTTGCC...AGCGATACCAAAGGGTACACCCATCTGTGAGTCACATCTTGAAAAACACTGAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560949.5
CDS-3UTR CAA 90 bp GCAGCAATTTGTTTAGGGAAAGGACAGGATACCATGTTGGGAGTGCACCATAGCCACGGAGCAGAAGACTaGTCTCTTGGCGAGGGACGG +
Preference number: 5 (lower is better)
Translates to: AAICLGKGQDTMLGVHHSHGAED*SLGEGR
Trigger: CCGTCCCTCGCCAAGAGACAAGTCTTCTGCTCCGTG...GCTATGGTGCACTCCCAACATGGTATCCTGTCCTTTCCCTAAACAAATTGCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560949.5
CDS-3UTR CAA 90 bp CTGCTGGGGCCACAGATTATAATAGGTGCATTCAGTGAACTCTTATCTTCTGAAGGGAGAGGGAATCCGTaGGGAGGGACAGTCGGGGGC +
Preference number: 5 (lower is better)
Translates to: LLGPQIIIGAFSELLSSEGRGNP*GGTVGG
Trigger: GCCCCCGACTGTCCCTCCCAACGGATTCCCTCTCCC...TTCAGAAGATAAGAGTTCACTGAATGCACCTATTATAATCTGTGGCCCCAGCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560949.5
CDS-3UTR CAA 90 bp TGCACCATAGCTAGAGGCATTGTGGCCCACGGAGAATCACTGGGAGATGAGATGAGATGGGTGTACCCTTaGGTATCGCTCCTACTCCAA +
Preference number: 5 (lower is better)
Translates to: CTIARGIVAHGESLGDEMRWVYP*VSLLLQ
Trigger: TTGGAGTAGGAGCGATACCAAAGGGTACACCCATCT...CATCTCATCTCCCAGTGATTCTCCGTGGGCCACAATGCCTCTAGCTATGGTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359704.2
ENST00000368414.6
ENST00000519565.5
ENST00000560949.5
CDS-3UTR CAA 90 bp TTGGCAGATGTGCCCTCATTTGACAAAGGTCAGGAAGGAATTCTAATGTTTCCCAGGGGCTTGATGGGCTaGTCTTCCAGGCACACCCGG +
Preference number: 5 (lower is better)
Translates to: LADVPSFDKGQEGILMFPRGLMG*SSRHTR
Trigger: CCGGGTGTGCCTGGAAGACAAGCCCATCAAGCCCCT...GGGAAACATTAGAATTCCTTCCTGACCTTTGTCAAATGAGGGCACATCTGCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519565.5
CDS-3UTR CAA 90 bp AAGGACAGGATACCATGTTGGGAGTGCACCATAGCTAGAGGCATTGTGGCCCACAGCAGGACCTACCTGTaGGCAGGAAGATTCTTTTCC +
Preference number: 5 (lower is better)
Translates to: KDRIPCWECTIARGIVAHSRTYL*AGRFFS
Trigger: GGAAAAGAATCTTCCTGCCAACAGGTAGGTCCTGCT...GTGGGCCACAATGCCTCTAGCTATGGTGCACTCCCAACATGGTATCCTGTCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519565.5
CDS-3UTR CAA 90 bp CACCAAGTCTCACAAGATGGCCTGGAAGGAGGTGCAGAGTTCAAAGACAGTCCATTCTACTTGGCCAAGTaGTACCTGGGCGCTCAGGTA +
Preference number: 5 (lower is better)
Translates to: HQVSQDGLEGGAEFKDSPFYLAK*YLGAQV
Trigger: TACCTGAGCGCCCAGGTACAACTTGGCCAAGTAGAA...TGGACTGTCTTTGAACTCTGCACCTCCTTCCAGGCCATCTTGTGAGACTTGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560949.5
CDS-3UTR CAA 90 bp GATGTGACTCACAGATGGGTGTACCCTTTGGTATCGCTCCTACTCCAACCAGCTTGTGGATCTTGCACTTaGGACACTTCTGGGCATTCC +
Preference number: 5 (lower is better)
Translates to: DVTHRWVYPLVSLLLQPACGSCT*DTSGHS
Trigger: GGAATGCCCAGAAGTGTCCAAAGTGCAAGATCCACA...AGCTGGTTGGAGTAGGAGCGATACCAAAGGGTACACCCATCTGTGAGTCACATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359704.2
ENST00000368414.6
ENST00000519565.5
ENST00000560949.5
CDS-3UTR CAA 90 bp TGCACCATAGCTAGAGGCATTGTGGCCCACGGAGAATCACTGGGAGATGAGATGAAGTGGCCTTGCTTGTaGGTACAGATAGGACTTCAG +
Preference number: 5 (lower is better)
Translates to: CTIARGIVAHGESLGDEMKWPCL*VQIGLQ
Trigger: CTGAAGTCCTATCTGTACCAACAAGCAAGGCCACTT...CATCTCATCTCCCAGTGATTCTCCGTGGGCCACAATGCCTCTAGCTATGGTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359704.2
ENST00000368414.6
ENST00000519565.5
ENST00000560949.5
CDS-3UTR CAA 90 bp GGAGAGTGGCACTTAAAACACCAGACGAATTGGCAGGTAGGGCACTGGATCTGTGACTCCAAACAGCCTTaGAAACCACTTCATCCTGCC +
Preference number: 5 (lower is better)
Translates to: GEWHLKHQTNWQVGHWICDSKQP*KPLHPA
Trigger: GGCAGGATGAAGTGGTTTCAAAGGCTGTTTGGAGTC...ACAGATCCAGTGCCCTACCTGCCAATTCGTCTGGTGTTTTAAGTGCCACTCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432158.6
CDS-3UTR CAA 90 bp GCAGCAATTTGTTTAGGGAAAGGACAGGATACCATGTTGGGAGTGCACCATAGCAGGCAGGAGAATCGCTaGAACCTGGGATGTGGAGGT +
Preference number: 5 (lower is better)
Translates to: AAICLGKGQDTMLGVHHSRQENR*NLGCGG
Trigger: ACCTCCACATCCCAGGTTCAAGCGATTCTCCTGCCT...GCTATGGTGCACTCCCAACATGGTATCCTGTCCTTTCCCTAAACAAATTGCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519565.5
CDS-3UTR CAA 90 bp CTGCTGGGGCCACAGATTATAATAGGTGCATTCAGTGAACTCTTATCTTCTGAATCGCACACGGCCTTCTaGCAGCAAGGCAGGGGCTTG +
Preference number: 5 (lower is better)
Translates to: LLGPQIIIGAFSELLSSESHTAF*QQGRGL
Trigger: CAAGCCCCTGCCTTGCTGCAAGAAGGCCGTGTGCGA...TTCAGAAGATAAGAGTTCACTGAATGCACCTATTATAATCTGTGGCCCCAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519565.5
ENST00000560949.5
CDS-3UTR CAA 90 bp CTTTGGACACTTCTGGGCATTCCTCTGCCCATGCTCAATTTCGCTGGCCCAGTGCTTGTACCAAAAGGTTaGACCCCTCTCTTCTTACTC +
Preference number: 5 (lower is better)
Translates to: LWTLLGIPLPMLNFAGPVLVPKG*TPLFLL
Trigger: GAGTAAGAAGAGAGGGGTCAAACCTTTTGGTACAAG...CACTGGGCCAGCGAAATTGAGCATGGGCAGAGGAATGCCCAGAAGTGTCCAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519565.5
CDS CCA 90 bp CTCAGTACAGGGTGCCATACTGTGGCCATGAATCTCACGATTGGTTaGCTGGGGTATCCATGTCAGTGCTCTCCTTACCTTAAATGGAGA +
Preference number: 5 (lower is better)
Translates to: LSTGCHTVAMNLTIG*LGYPCQCSPYLKWR
Trigger: TCTCCATTTAAGGTAAGGAGAGCACTGACATGGATACCCCAGCCAACCAATCGTGAGATTCATGGCCACAGTATGGCACCCTGTACTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432158.6
CDS-3UTR CAA 90 bp GAGTGGCACTTAAAACACCAGACGAATTGGCAGGTAGGGCACTGGATCTGTTCATGTGGATCTTGCACTTaGGACACTTCTGGGCATTCC +
Preference number: 5 (lower is better)
Translates to: EWHLKHQTNWQVGHWICSCGSCT*DTSGHS
Trigger: GGAATGCCCAGAAGTGTCCAAAGTGCAAGATCCACA...TGAACAGATCCAGTGCCCTACCTGCCAATTCGTCTGGTGTTTTAAGTGCCACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432158.6
CDS-3UTR CAA 90 bp GTGTTACATTGTGAGCAGGTCATATGGTCACATCCTTCAGTTCGCTGGATGTGGCGCTGGATGTGGATCTaGCACTTTGGACACTTCTGG +
Preference number: 5 (lower is better)
Translates to: VLHCEQVIWSHPSVRWMWRWMWI*HFGHFW
Trigger: CCAGAAGTGTCCAAAGTGCAAGATCCACATCCAGCG...CCACATCCAGCGAACTGAAGGATGTGACCATATGACCTGCTCACAATGTAACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000432158.6
ENST00000519565.5
CDS-3UTR CAA 90 bp CAAGATGGCCTGGAAGGAGGTGCAGAGTTCAAAGACAGTCCAAGCAATTCTCAGAGATGGGTGTACCCTTaGGTATCGCTCCTACTCCAA +
Preference number: 5 (lower is better)
Translates to: QDGLEGGAEFKDSPSNSQRWVYP*VSLLLQ
Trigger: TTGGAGTAGGAGCGATACCAAAGGGTACACCCATCT...CTGAGAATTGCTTGGACTGTCTTTGAACTCTGCACCTCCTTCCAGGCCATCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359704.2
ENST00000368414.6
ENST00000519565.5
ENST00000560949.5
CDS-3UTR CAA 90 bp TGCTTGTTGGTACAGATAGGACTTCAGCTATTAACACCAAGTCTCACAAGATGGCAGCAAGGCAGGGGCTaGATGGGCTTGTCTTCCAGG +
Preference number: 5 (lower is better)
Translates to: CLLVQIGLQLLTPSLTRWQQGRG*MGLSSR
Trigger: CCTGGAAGACAAGCCCATCAAGCCCCTGCCTTGCTG...CCATCTTGTGAGACTTGGTGTTAATAGCTGAAGTCCTATCTGTACCAACAAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519565.5
ENST00000560949.5
CDS-3UTR CAA 90 bp CACCAGACGAATTGGCAGGTAGGGCACTGGATCTGTTCATCACAAAGAACAAAGAAAACACCAGACGAATaGGCAGGTAGGGCACTGGAT +
Preference number: 5 (lower is better)
Translates to: HQTNWQVGHWICSSQRTKKTPDE*AGRALD
Trigger: ATCCAGTGCCCTACCTGCCAATTCGTCTGGTGTTTT...CTTTGTTCTTTGTGATGAACAGATCCAGTGCCCTACCTGCCAATTCGTCTGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432158.6
CDS-3UTR CAA 90 bp GGTGCAGAGTTCAAAGACAGTCCAAGCAATTCTCAGAAGAGGCGTGCTCAGAATAAAACACCAGACGAATaGGCAGGTAGGGCACTGGAT +
Preference number: 5 (lower is better)
Translates to: GAEFKDSPSNSQKRRAQNKTPDE*AGRALD
Trigger: ATCCAGTGCCCTACCTGCCAATTCGTCTGGTGTTTT...ATTCTGAGCACGCCTCTTCTGAGAATTGCTTGGACTGTCTTTGAACTCTGCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359704.2
ENST00000368414.6
ENST00000519565.5
ENST00000560949.5
CDS-3UTR CAA 90 bp CTTGCAGTTAACACCTTCATGCCAAGGAGAGTGGCACTTAAAACACCAGACGAACGCTGGATGTGGATCTaGCACTTTGGACACTTCTGG +
Preference number: 5 (lower is better)
Translates to: LAVNTFMPRRVALKTPDERWMWI*HFGHFW
Trigger: CCAGAAGTGTCCAAAGTGCAAGATCCACATCCAGCG...TTCGTCTGGTGTTTTAAGTGCCACTCTCCTTGGCATGAAGGTGTTAACTGCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000432158.6
ENST00000519565.5
CDS-3UTR CAA 90 bp ACCAAGTCTCACAAGATGGCCTGGAAGGAGGTGCAGAGTTCAAAGACAGTCCAACTCCTTGGGGTGACGTaGCACAAATTTCTGTGTTTG +
Preference number: 5 (lower is better)
Translates to: TKSHKMAWKEVQSSKTVQLLGVT*HKFLCL
Trigger: CAAACACAGAAATTTGTGCAACGTCACCCCAAGGAG...TTGGACTGTCTTTGAACTCTGCACCTCCTTCCAGGCCATCTTGTGAGACTTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519565.5
ENST00000560949.5
CDS-3UTR CAA 90 bp GATGTGACTCACAGATGGGTGTACCCTTTGGTATCGCTCCTACTCCAACCAGCTGAATTTATCCCACACTaGGCCAAGATGGGAAGAAGA +
Preference number: 5 (lower is better)
Translates to: DVTHRWVYPLVSLLLQPAEFIPH*AKMGRR
Trigger: TCTTCTTCCCATCTTGGCCAAGTGTGGGATAAATTC...AGCTGGTTGGAGTAGGAGCGATACCAAAGGGTACACCCATCTGTGAGTCACATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519565.5
CDS-3UTR CAA 90 bp GTCTCACAAGATGGCCTGGAAGGAGGTGCAGAGTTCAAAGACAGTCCAAGCAATGCATTTGATTTCTACTaGGCCAAGTTGTACCTGGGC +
Preference number: 5 (lower is better)
Translates to: VSQDGLEGGAEFKDSPSNAFDFY*AKLYLG
Trigger: GCCCAGGTACAACTTGGCCAAGTAGAAATCAAATGC...ATTGCTTGGACTGTCTTTGAACTCTGCACCTCCTTCCAGGCCATCTTGTGAGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560949.5
CDS TCA 90 bp TCTTCCAGGCTCTATGTCTGTGAGAGGGCTTCACAGGAGGTGTTTTaGAGAGATTACAAGGGCTCCTGCAGCACAAATAAATGTGGCTTC +
Preference number: 5 (lower is better)
Translates to: SSRLYVCERASQEVF*RDYKGSCSTNKCGF
Trigger: GAAGCCACATTTATTTGTGCTGCAGGAGCCCTTGTAATCTCTTCAAAACACCTCCTGTGAAGCCCTCTCACAGACATAGAGCCTGGAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431104.2
CDS-3UTR CAA 90 bp CACCAAGTCTCACAAGATGGCCTGGAAGGAGGTGCAGAGTTCAAAGACAGTCCACACTGGATTTTGTATTaGCTTTCTGATCTGGAAGGG +
Preference number: 5 (lower is better)
Translates to: HQVSQDGLEGGAEFKDSPHWILY*LSDLEG
Trigger: CCCTTCCAGATCAGAAAGCAAATACAAAATCCAGTG...TGGACTGTCTTTGAACTCTGCACCTCCTTCCAGGCCATCTTGTGAGACTTGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359704.2
ENST00000368414.6
ENST00000519565.5
ENST00000560949.5
CDS-3UTR CAA 90 bp ACAGATAGGACTTCAGCTATTAACACCAAGTCTCACAAGATGGCCTGGAAGGAGAAAACACCAGACGAATaGGCAGGTAGGGCACTGGAT +
Preference number: 5 (lower is better)
Translates to: TDRTSAINTKSHKMAWKEKTPDE*AGRALD
Trigger: ATCCAGTGCCCTACCTGCCAATTCGTCTGGTGTTTT...CTCCTTCCAGGCCATCTTGTGAGACTTGGTGTTAATAGCTGAAGTCCTATCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359704.2
ENST00000368414.6
ENST00000519565.5
ENST00000560949.5
CDS-3UTR CAA 90 bp GCAGAGTTCAAAGACAGTCCAAGCAATTCTCAGAAGAGGCGTGCTCAGAATTCTAAAACACCAGACGAATaGGCAGGTAGGGCACTGGAT +
Preference number: 5 (lower is better)
Translates to: AEFKDSPSNSQKRRAQNSKTPDE*AGRALD
Trigger: ATCCAGTGCCCTACCTGCCAATTCGTCTGGTGTTTT...AGAATTCTGAGCACGCCTCTTCTGAGAATTGCTTGGACTGTCTTTGAACTCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359704.2
ENST00000368414.6
ENST00000519565.5
ENST00000560949.5
CDS-3UTR CAA 90 bp TCTCAGTGTTTTTCAAGATGTGACTCACAGATGGGTGTACCCTTTGGTATCGCTCGCTGGATGTGGATCTaGCACTTTGGACACTTCTGG +
Preference number: 5 (lower is better)
Translates to: SQCFSRCDSQMGVPFGIARWMWI*HFGHFW
Trigger: CCAGAAGTGTCCAAAGTGCAAGATCCACATCCAGCG...AGCGATACCAAAGGGTACACCCATCTGTGAGTCACATCTTGAAAAACACTGAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359704.2
ENST00000368414.6
ENST00000519565.5
ENST00000560949.5
CDS-3UTR CAA 90 bp GCAGAGTTCAAAGACAGTCCAAGCAATTCTCAGAAGAGGCGTGCTCAGAATTCTAGATGGGTGTACCCTTaGGTATCGCTCCTACTCCAA +
Preference number: 5 (lower is better)
Translates to: AEFKDSPSNSQKRRAQNSRWVYP*VSLLLQ
Trigger: TTGGAGTAGGAGCGATACCAAAGGGTACACCCATCT...AGAATTCTGAGCACGCCTCTTCTGAGAATTGCTTGGACTGTCTTTGAACTCTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359704.2
ENST00000368414.6
ENST00000519565.5
ENST00000560949.5
CDS-3UTR CAA 90 bp TCAGCTATTAACACCAAGTCTCACAAGATGGCCTGGAAGGAGGTGCAGAGTTCACTCCTTGGGGTGACGTaGCACAAATTTCTGTGTTTG +
Preference number: 5 (lower is better)
Translates to: SAINTKSHKMAWKEVQSSLLGVT*HKFLCL
Trigger: CAAACACAGAAATTTGTGCAACGTCACCCCAAGGAG...TGAACTCTGCACCTCCTTCCAGGCCATCTTGTGAGACTTGGTGTTAATAGCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519565.5
ENST00000560949.5
CDS-3UTR CAA 90 bp GCAGAGTTCAAAGACAGTCCAAGCAATTCTCAGAAGAGGCGTGCTCAGAATTCTAGCTGGACTGATGTCTaGGCAGATGTGCCCTCATTT +
Preference number: 5 (lower is better)
Translates to: AEFKDSPSNSQKRRAQNSSWTDV*ADVPSF
Trigger: AAATGAGGGCACATCTGCCAAGACATCAGTCCAGCT...AGAATTCTGAGCACGCCTCTTCTGAGAATTGCTTGGACTGTCTTTGAACTCTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519565.5
CDS-3UTR CAA 90 bp GGAAGGAGGTGCAGAGTTCAAAGACAGTCCAAGCAATTCTCAGAAGAGGCGTGCCAAGGTGTCCGTCTTTaGAAAGACTTGTCCCTAAAA +
Preference number: 5 (lower is better)
Translates to: GRRCRVQRQSKQFSEEACQGVRL*KDLSLK
Trigger: TTTTAGGGACAAGTCTTTCAAAAGACGGACACCTTG...GCACGCCTCTTCTGAGAATTGCTTGGACTGTCTTTGAACTCTGCACCTCCTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519565.5
CDS-3UTR CAA 90 bp GCAGCAATTTGTTTAGGGAAAGGACAGGATACCATGTTGGGAGTGCACCATAGCACCTTCATCCCTTTCTaGAACTGGTTTATGGGTGTG +
Preference number: 5 (lower is better)
Translates to: AAICLGKGQDTMLGVHHSTFIPF*NWFMGV
Trigger: CACACCCATAAACCAGTTCAAGAAAGGGATGAAGGT...GCTATGGTGCACTCCCAACATGGTATCCTGTCCTTTCCCTAAACAAATTGCTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359704.2
CDS-3UTR CAA 90 bp ACCAAGTCTCACAAGATGGCCTGGAAGGAGGTGCAGAGTTCAAAGACAGTCCAACACTGGATTTTGTATTaGCTTTCTGATCTGGAAGGG +
Preference number: 5 (lower is better)
Translates to: TKSHKMAWKEVQSSKTVQHWILY*LSDLEG
Trigger: CCCTTCCAGATCAGAAAGCAAATACAAAATCCAGTG...TTGGACTGTCTTTGAACTCTGCACCTCCTTCCAGGCCATCTTGTGAGACTTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359704.2
ENST00000368414.6
ENST00000519565.5
ENST00000560949.5
CDS-3UTR CAA 90 bp TGGCCTTGCTTGTTGGTACAGATAGGACTTCAGCTATTAACACCAAGTCTCACATGTGGATCTTGCACTTaGGACACTTCTGGGCATTCC +
Preference number: 5 (lower is better)
Translates to: WPCLLVQIGLQLLTPSLTCGSCT*DTSGHS
Trigger: GGAATGCCCAGAAGTGTCCAAAGTGCAAGATCCACA...TGTGAGACTTGGTGTTAATAGCTGAAGTCCTATCTGTACCAACAAGCAAGGCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359704.2
ENST00000368414.6
ENST00000519565.5
ENST00000560949.5
CDS-3UTR CAA 90 bp GCACCACTGAATCTTGATACCACAGCAGAGAAAGTACAATTAAAGATATCATGTCAGCAAGGCAGGGGCTaGATGGGCTTGTCTTCCAGG +
Preference number: 5 (lower is better)
Translates to: APLNLDTTAEKVQLKISCQQGRG*MGLSSR
Trigger: CCTGGAAGACAAGCCCATCAAGCCCCTGCCTTGCTG...ACATGATATCTTTAATTGTACTTTCTCTGCTGTGGTATCAAGATTCAGTGGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519565.5
CDS-3UTR CAA 90 bp CATTTGAAAGATAAAAGAATTATACTGCTGGGGCCACAGATTATAATAGGTGCATCGCACACGGCCTTCTaGCAGCAAGGCAGGGGCTTG +
Preference number: 5 (lower is better)
Translates to: HLKDKRIILLGPQIIIGASHTAF*QQGRGL
Trigger: CAAGCCCCTGCCTTGCTGCAAGAAGGCCGTGTGCGA...TGCACCTATTATAATCTGTGGCCCCAGCAGTATAATTCTTTTATCTTTCAAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000519565.5
ENST00000560949.5
CDS-3UTR CAA 90 bp AAGGACAGGATACCATGTTGGGAGTGCACCATAGCTAGAGGCATTGTGGCCCACCAAAAGCAGCTGATATaGGACAAACTCAAGAACATA +
Preference number: 5 (lower is better)
Translates to: KDRIPCWECTIARGIVAHQKQLI*DKLKNI
Trigger: TATGTTCTTGAGTTTGTCCAATATCAGCTGCTTTTG...GTGGGCCACAATGCCTCTAGCTATGGTGCACTCCCAACATGGTATCCTGTCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519565.5
ENST00000560949.5
CDS-3UTR CAA 90 bp CTCACAAGATGGCCTGGAAGGAGGTGCAGAGTTCAAAGACAGTCCAAGCAATTCTGGCAAGGTATTTATTaGGCTAATCAGGCAGAAAGG +
Preference number: 5 (lower is better)
Translates to: LTRWPGRRCRVQRQSKQFWQGIY*ANQAER
Trigger: CCTTTCTGCCTGATTAGCCAAATAAATACCTTGCCA...GAATTGCTTGGACTGTCTTTGAACTCTGCACCTCCTTCCAGGCCATCTTGTGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519565.5
ENST00000560949.5
CDS-3UTR CAA 90 bp GCAGCAATTTGTTTAGGGAAAGGACAGGATACCATGTTGGGAGTGCACCATAGCAAGATAAAGGCTCAATaGGAGCCTTGGGACTCAAGA +
Preference number: 5 (lower is better)
Translates to: AAICLGKGQDTMLGVHHSKIKAQ*EPWDSR
Trigger: TCTTGAGTCCCAAGGCTCCAATTGAGCCTTTATCTT...GCTATGGTGCACTCCCAACATGGTATCCTGTCCTTTCCCTAAACAAATTGCTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519565.5
CDS-3UTR CAA 90 bp ACCAAGTCTCACAAGATGGCCTGGAAGGAGGTGCAGAGTTCAAAGACAGTCCAATGCTTAAACTTGGGATaGGTGTGCAAAACTGGTAGT +
Preference number: 5 (lower is better)
Translates to: TKSHKMAWKEVQSSKTVQCLNLG*VCKTGS
Trigger: ACTACCAGTTTTGCACACCAATCCCAAGTTTAAGCA...TTGGACTGTCTTTGAACTCTGCACCTCCTTCCAGGCCATCTTGTGAGACTTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519565.5
CDS-3UTR CAA 90 bp CTATTAACACCAAGTCTCACAAGATGGCCTGGAAGGAGGTGCAGAGTTCAAAGATCTGTGATGGGGCATTaGATTTCTACTTGGCCAAGT +
Preference number: 5 (lower is better)
Translates to: LLTPSLTRWPGRRCRVQRSVMGH*ISTWPS
Trigger: ACTTGGCCAAGTAGAAATCAAATGCCCCATCACAGA...TCTTTGAACTCTGCACCTCCTTCCAGGCCATCTTGTGAGACTTGGTGTTAATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359704.2
ENST00000368414.6
ENST00000519565.5
ENST00000560949.5
CDS-3UTR CAA 90 bp GCAGAGTTCAAAGACAGTCCAAGCAATTCTCAGAAGAGGCGTGCTCAGAATTCTTCTGTGATGGGGCATTaGATTTCTACTTGGCCAAGT +
Preference number: 5 (lower is better)
Translates to: AEFKDSPSNSQKRRAQNSSVMGH*ISTWPS
Trigger: ACTTGGCCAAGTAGAAATCAAATGCCCCATCACAGA...AGAATTCTGAGCACGCCTCTTCTGAGAATTGCTTGGACTGTCTTTGAACTCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359704.2
ENST00000368414.6
ENST00000519565.5
ENST00000560949.5
CDS-3UTR CAA 90 bp TCAGCTATTAACACCAAGTCTCACAAGATGGCCTGGAAGGAGGTGCAGAGTTCAGTAGGGCACTGGATTTaGTATTTGCTTTCTGATCTG +
Preference number: 5 (lower is better)
Translates to: SAINTKSHKMAWKEVQSSVGHWI*YLLSDL
Trigger: CAGATCAGAAAGCAAATACAAAATCCAGTGCCCTAC...TGAACTCTGCACCTCCTTCCAGGCCATCTTGTGAGACTTGGTGTTAATAGCTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359704.2
ENST00000368414.6
ENST00000519565.5
ENST00000560949.5
CDS-3UTR CAA 90 bp TTGCTTGTTGGTACAGATAGGACTTCAGCTATTAACACCAAGTCTCACAAGATGCGCTGGATGTGGATCTaGCACTTTGGACACTTCTGG +
Preference number: 5 (lower is better)
Translates to: LLVGTDRTSAINTKSHKMRWMWI*HFGHFW
Trigger: CCAGAAGTGTCCAAAGTGCAAGATCCACATCCAGCG...CATCTTGTGAGACTTGGTGTTAATAGCTGAAGTCCTATCTGTACCAACAAGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359704.2
ENST00000368414.6
ENST00000519565.5
ENST00000560949.5
CDS-3UTR CAA 90 bp ACAGATAGGACTTCAGCTATTAACACCAAGTCTCACAAGATGGCCTGGAAGGAGAGCCAAATGTTGGGTTaGATTCCTGGTTCTACCACT +
Preference number: 5 (lower is better)
Translates to: TDRTSAINTKSHKMAWKESQMLG*IPGSTT
Trigger: AGTGGTAGAACCAGGAATCAAACCCAACATTTGGCT...CTCCTTCCAGGCCATCTTGTGAGACTTGGTGTTAATAGCTGAAGTCCTATCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359704.2
ENST00000560949.5
CDS-3UTR CAA 90 bp CTATTAACACCAAGTCTCACAAGATGGCCTGGAAGGAGGTGCAGAGTTCAAAGAAGCCAAATGTTGGGTTaGATTCCTGGTTCTACCACT +
Preference number: 5 (lower is better)
Translates to: LLTPSLTRWPGRRCRVQRSQMLG*IPGSTT
Trigger: AGTGGTAGAACCAGGAATCAAACCCAACATTTGGCT...TCTTTGAACTCTGCACCTCCTTCCAGGCCATCTTGTGAGACTTGGTGTTAATAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359704.2
ENST00000560949.5
CDS-3UTR CAA 90 bp TGGCCTTGCTTGTTGGTACAGATAGGACTTCAGCTATTAACACCAAGTCTCACAAAGTGGCCTTGCTTGTaGGTACAGATAGGACTTCAG +
Preference number: 5 (lower is better)
Translates to: WPCLLVQIGLQLLTPSLTKWPCL*VQIGLQ
Trigger: CTGAAGTCCTATCTGTACCAACAAGCAAGGCCACTT...TGTGAGACTTGGTGTTAATAGCTGAAGTCCTATCTGTACCAACAAGCAAGGCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359704.2
ENST00000368414.6
ENST00000519565.5
ENST00000560949.5
CDS-3UTR CAA 90 bp CTATTAACACCAAGTCTCACAAGATGGCCTGGAAGGAGGTGCAGAGTTCAAAGAGAAAAGTGGCCTTGCTaGTTGGTACAGATAGGACTT +
Preference number: 5 (lower is better)
Translates to: LLTPSLTRWPGRRCRVQREKWPC*LVQIGL
Trigger: AAGTCCTATCTGTACCAACAAGCAAGGCCACTTTTC...TCTTTGAACTCTGCACCTCCTTCCAGGCCATCTTGTGAGACTTGGTGTTAATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359704.2
ENST00000368414.6
ENST00000519565.5
ENST00000560949.5
CDS-3UTR CAA 90 bp CTCACAAGATGGCCTGGAAGGAGGTGCAGAGTTCAAAGACAGTCCAAGCAATTCGCATTTGATTTCTACTaGGCCAAGTTGTACACTGTA +
Preference number: 5 (lower is better)
Translates to: LTRWPGRRCRVQRQSKQFAFDFY*AKLYTV
Trigger: TACAGTGTACAACTTGGCCAAGTAGAAATCAAATGC...GAATTGCTTGGACTGTCTTTGAACTCTGCACCTCCTTCCAGGCCATCTTGTGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368414.6
CDS-3UTR CAA 90 bp CACCAAGTCTCACAAGATGGCCTGGAAGGAGGTGCAGAGTTCAAAGACAGTCCAATGTTATTCAGCCCGTaGGTATATATGTATATGGCA +
Preference number: 5 (lower is better)
Translates to: HQVSQDGLEGGAEFKDSPMLFSP*VYMYMA
Trigger: TGCCATATACATATATACCAACGGGCTGAATAACAT...TGGACTGTCTTTGAACTCTGCACCTCCTTCCAGGCCATCTTGTGAGACTTGGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519565.5
ENST00000560949.5
CDS-3UTR CAA 90 bp GTGTTACATTGTGAGCAGGTCATATGGTCACATCCTTCAGTTCGCTGGATGTGGTGGCAAGGTATTTATTaGGCTAATCAGGCAGAAAGG +
Preference number: 5 (lower is better)
Translates to: VLHCEQVIWSHPSVRWMWWQGIY*ANQAER
Trigger: CCTTTCTGCCTGATTAGCCAAATAAATACCTTGCCA...CCACATCCAGCGAACTGAAGGATGTGACCATATGACCTGCTCACAATGTAACAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519565.5
CDS-3UTR CAA 90 bp GTCTCACAAGATGGCCTGGAAGGAGGTGCAGAGTTCAAAGACAGTCCAAGCAATACTTGGGTGGTAAGGTaGAAAGATAAAGGCTCAATT +
Preference number: 5 (lower is better)
Translates to: VSQDGLEGGAEFKDSPSNTWVVR*KDKGSI
Trigger: AATTGAGCCTTTATCTTTCAACCTTACCACCCAAGT...ATTGCTTGGACTGTCTTTGAACTCTGCACCTCCTTCCAGGCCATCTTGTGAGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519565.5
CDS-3UTR CAA 90 bp TGTGACTCACAGATGGGTGTACCCTTTGGTATCGCTCCTACTCCAACCAGCTTACTCTGTTTCTTGGATTaGGATGAAGTCAACCAAAGT +
Preference number: 5 (lower is better)
Translates to: CDSQMGVPFGIAPTPTSLLCFLD*DEVNQS
Trigger: ACTTTGGTTGACTTCATCCAAATCCAAGAAACAGAG...TAAGCTGGTTGGAGTAGGAGCGATACCAAAGGGTACACCCATCTGTGAGTCACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519565.5
CDS-3UTR CAA 90 bp CTATTAACACCAAGTCTCACAAGATGGCCTGGAAGGAGGTGCAGAGTTCAAAGACAGGTTACACAAAACTaGACTCTTCCCCTCATTATG +
Preference number: 5 (lower is better)
Translates to: LLTPSLTRWPGRRCRVQRQVTQN*TLPLIM
Trigger: CATAATGAGGGGAAGAGTCAAGTTTTGTGTAACCTG...TCTTTGAACTCTGCACCTCCTTCCAGGCCATCTTGTGAGACTTGGTGTTAATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359704.2
ENST00000368414.6
CDS-3UTR CAA 90 bp ATGTGGAAAAATAGTGTAGCGGCATGGAACTGGGTAAGTACAAGGTTACTGGGCCAGGTTACACAAAACTaGACTCTTCCCCTCATTATG +
Preference number: 5 (lower is better)
Translates to: MWKNSVAAWNWVSTRLLGQVTQN*TLPLIM
Trigger: CATAATGAGGGGAAGAGTCAAGTTTTGTGTAACCTG...GCCCAGTAACCTTGTACTTACCCAGTTCCATGCCGCTACACTATTTTTCCACAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000368414.6
CDS-3UTR CAA 90 bp CTATTAACACCAAGTCTCACAAGATGGCCTGGAAGGAGGTGCAGAGTTCAAAGATTCTACTTGGCCAAGTaGTACCTTCATCCCTTTCTT +
Preference number: 5 (lower is better)
Translates to: LLTPSLTRWPGRRCRVQRFYLAK*YLHPFL
Trigger: AAGAAAGGGATGAAGGTACAACTTGGCCAAGTAGAA...TCTTTGAACTCTGCACCTCCTTCCAGGCCATCTTGTGAGACTTGGTGTTAATAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359704.2
CDS-3UTR CAA 90 bp TCCAACCAGCTTAGCTGGATGAAATCATCTGCATGTTACCAGTGCATACCTGTCGTAGGGCACTGGATTTaGTATTTGCTTTCTGATCTG +
Preference number: 5 (lower is better)
Translates to: SNQLSWMKSSACYQCIPVVGHWI*YLLSDL
Trigger: CAGATCAGAAAGCAAATACAAAATCCAGTGCCCTAC...GACAGGTATGCACTGGTAACATGCAGATGATTTCATCCAGCTAAGCTGGTTGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359704.2
ENST00000519565.5
ENST00000560949.5
CDS-3UTR CAA 90 bp TTGCTTGTTGGTACAGATAGGACTTCAGCTATTAACACCAAGTCTCACAAGATGAAAACACCAGACGAATaGGCAGGTAGGGCACTGGAT +
Preference number: 5 (lower is better)
Translates to: LLVGTDRTSAINTKSHKMKTPDE*AGRALD
Trigger: ATCCAGTGCCCTACCTGCCAATTCGTCTGGTGTTTT...CATCTTGTGAGACTTGGTGTTAATAGCTGAAGTCCTATCTGTACCAACAAGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359704.2
ENST00000368414.6
ENST00000519565.5
ENST00000560949.5
CDS-3UTR CAA 90 bp TTGCTTGTTGGTACAGATAGGACTTCAGCTATTAACACCAAGTCTCACAAGATGTGTGGATCTTGCACTTaGGACACTTCTGGGCATTCC +
Preference number: 5 (lower is better)
Translates to: LLVGTDRTSAINTKSHKMCGSCT*DTSGHS
Trigger: GGAATGCCCAGAAGTGTCCAAAGTGCAAGATCCACA...CATCTTGTGAGACTTGGTGTTAATAGCTGAAGTCCTATCTGTACCAACAAGCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359704.2
ENST00000368414.6
ENST00000519565.5
ENST00000560949.5
CDS-3UTR CAA 90 bp TCTGAAAAGTGGCCTTGCTTGTTGGTACAGATAGGACTTCAGCTATTAACACCAAAGTGGCCTTGCTTGTaGGTACAGATAGGACTTCAG +
Preference number: 5 (lower is better)
Translates to: SEKWPCLLVQIGLQLLTPKWPCL*VQIGLQ
Trigger: CTGAAGTCCTATCTGTACCAACAAGCAAGGCCACTT...TGGTGTTAATAGCTGAAGTCCTATCTGTACCAACAAGCAAGGCCACTTTTCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359704.2
ENST00000368414.6
ENST00000519565.5
ENST00000560949.5
CDS-3UTR CAA 90 bp TGTTTTTCAAGATGTGACTCACAGATGGGTGTACCCTTTGGTATCGCTCCTACTGAAAAGTGGCCTTGCTaGTTGGTACAGATAGGACTT +
Preference number: 5 (lower is better)
Translates to: CFSRCDSQMGVPFGIAPTEKWPC*LVQIGL
Trigger: AAGTCCTATCTGTACCAACAAGCAAGGCCACTTTTC...AGTAGGAGCGATACCAAAGGGTACACCCATCTGTGAGTCACATCTTGAAAAACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000359704.2
ENST00000368414.6
ENST00000519565.5
ENST00000560949.5
CDS-3UTR CAA 90 bp TTGGCAGATGTGCCCTCATTTGACAAAGGTCAGGAAGGAATTCTAATGTTTCCCGAAAAGTGGCCTTGCTaGTTGGTACAGATAGGACTT +
Preference number: 5 (lower is better)
Translates to: LADVPSFDKGQEGILMFPEKWPC*LVQIGL
Trigger: AAGTCCTATCTGTACCAACAAGCAAGGCCACTTTTC...GGGAAACATTAGAATTCCTTCCTGACCTTTGTCAAATGAGGGCACATCTGCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519565.5
CDS-3UTR CAA 90 bp ACCAAGTCTCACAAGATGGCCTGGAAGGAGGTGCAGAGTTCAAAGACAGTCCAAAGTCCCACACAAAGTTaGGCTATGAAATGTGTATTT +
Preference number: 5 (lower is better)
Translates to: TKSHKMAWKEVQSSKTVQSPTQS*AMKCVF
Trigger: AAATACACATTTCATAGCCAAACTTTGTGTGGGACT...TTGGACTGTCTTTGAACTCTGCACCTCCTTCCAGGCCATCTTGTGAGACTTGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519565.5
CDS-3UTR CAA 90 bp CTATTAACACCAAGTCTCACAAGATGGCCTGGAAGGAGGTGCAGAGTTCAAAGACACAACAAAAGGTCATaGGGACATTACGAAAAGTCG +
Preference number: 5 (lower is better)
Translates to: LLTPSLTRWPGRRCRVQRHNKRS*GHYEKS
Trigger: CGACTTTTCGTAATGTCCCAATGACCTTTTGTTGTG...TCTTTGAACTCTGCACCTCCTTCCAGGCCATCTTGTGAGACTTGGTGTTAATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519565.5
CDS-3UTR CAA 90 bp TCCAACCAGCTTAGCTGGATGAAATCATCTGCATGTTACCAGTGCATACCTGTCGCATTTGATTTCTACTaGGCCAAGTTGTACCTTCAT +
Preference number: 5 (lower is better)
Translates to: SNQLSWMKSSACYQCIPVAFDFY*AKLYLH
Trigger: ATGAAGGTACAACTTGGCCAAGTAGAAATCAAATGC...GACAGGTATGCACTGGTAACATGCAGATGATTTCATCCAGCTAAGCTGGTTGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359704.2
CDS-3UTR CAA 90 bp TCTCAGTGTTTTTCAAGATGTGACTCACAGATGGGTGTACCCTTTGGTATCGCTCACTGGATTTTGTATTaGCTTTCTGATCTGGAAGGG +
Preference number: 5 (lower is better)
Translates to: SQCFSRCDSQMGVPFGIAHWILY*LSDLEG
Trigger: CCCTTCCAGATCAGAAAGCAAATACAAAATCCAGTG...AGCGATACCAAAGGGTACACCCATCTGTGAGTCACATCTTGAAAAACACTGAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000359704.2
ENST00000368414.6
ENST00000519565.5
ENST00000560949.5
CDS-3UTR CAA 90 bp TGTTTTTCAAGATGTGACTCACAGATGGGTGTACCCTTTGGTATCGCTCCTACTGTAGGGCACTGGATTTaGTATTTGCTTTCTGATCTG +
Preference number: 5 (lower is better)
Translates to: CFSRCDSQMGVPFGIAPTVGHWI*YLLSDL
Trigger: CAGATCAGAAAGCAAATACAAAATCCAGTGCCCTAC...AGTAGGAGCGATACCAAAGGGTACACCCATCTGTGAGTCACATCTTGAAAAACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359704.2
ENST00000368414.6
ENST00000519565.5
ENST00000560949.5
CDS-3UTR CAA 90 bp TTGCTTGTTGGTACAGATAGGACTTCAGCTATTAACACCAAGTCTCACAAGATGCTGTGGAGCCAAATGTaGGGTTTGATTCCTGGTTCT +
Preference number: 5 (lower is better)
Translates to: LLVGTDRTSAINTKSHKMLWSQM*GLIPGS
Trigger: AGAACCAGGAATCAAACCCAACATTTGGCTCCACAG...CATCTTGTGAGACTTGGTGTTAATAGCTGAAGTCCTATCTGTACCAACAAGCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359704.2
ENST00000560949.5
CDS-3UTR CAA 90 bp TCAATACGGCCAAGTTCCAAGAAGTACTTATACTTGATGGAGTCTTCATGCGTTAAGTGGCCTTGCTTGTaGGTACAGATAGGACTTCAG +
Preference number: 5 (lower is better)
Translates to: SIRPSSKKYLYLMESSCVKWPCL*VQIGLQ
Trigger: CTGAAGTCCTATCTGTACCAACAAGCAAGGCCACTT...AACGCATGAAGACTCCATCAAGTATAAGTACTTCTTGGAACTTGGCCGTATTGA
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519565.5
CDS-3UTR CAA 90 bp ATGTGGAAAAATAGTGTAGCGGCATGGAACTGGGTAAGTACAAGGTTACTGGGCTTCTACTTGGCCAAGTaGTACACTGTATATGCTTCA +
Preference number: 5 (lower is better)
Translates to: MWKNSVAAWNWVSTRLLGFYLAK*YTVYAS
Trigger: TGAAGCATATACAGTGTACAACTTGGCCAAGTAGAA...GCCCAGTAACCTTGTACTTACCCAGTTCCATGCCGCTACACTATTTTTCCACAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368414.6
CDS-3UTR CAA 90 bp ATAAATCCACCCCAAGTCCAAGCTGTAGGACGTTTTGCTGAAACAAAGACCATAGGTGGCAACAAGATGTaGCTTGTACCAAAAGGTTTG +
Preference number: 5 (lower is better)
Translates to: INPPQVQAVGRFAETKTIGGNKM*LVPKGL
Trigger: CAAACCTTTTGGTACAAGCAACATCTTGTTGCCACC...TATGGTCTTTGTTTCAGCAAAACGTCCTACAGCTTGGACTTGGGGTGGATTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000519565.5
CDS-3UTR CAA 90 bp ATCTCCTTAAATGAGGTCTCTCTGGGAGGTAGCGATATTTGCATCCAAATATACCAGATGTGCCCTCATTaGACAAAGGTCAGGAAGGAA +
Preference number: 5 (lower is better)
Translates to: ISLNEVSLGGSDICIQIYQMCPH*TKVRKE
Trigger: TTCCTTCCTGACCTTTGTCAAATGAGGGCACATCTG...GTATATTTGGATGCAAATATCGCTACCTCCCAGAGAGACCTCATTTAAGGAGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519565.5
CDS-3UTR CAA 90 bp ATGTGGAAAAATAGTGTAGCGGCATGGAACTGGGTAAGTACAAGGTTACTGGGCGGAGTGCGTTCAGTGTaGAATTCATTTCATTACAGT +
Preference number: 5 (lower is better)
Translates to: MWKNSVAAWNWVSTRLLGGVRSV*NSFHYS
Trigger: ACTGTAATGAAATGAATTCAACACTGAACGCACTCC...GCCCAGTAACCTTGTACTTACCCAGTTCCATGCCGCTACACTATTTTTCCACAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000519565.5
CDS-3UTR CAA 90 bp CTTGCAGTTAACACCTTCATGCCAAGGAGAGTGGCACTTAAAACACCAGACGAAAACTGGTATCTTCATTaGCTTGACTTACTTCTTGGC +
Preference number: 5 (lower is better)
Translates to: LAVNTFMPRRVALKTPDENWYLH*LDLLLG
Trigger: GCCAAGAAGTAAGTCAAGCAAATGAAGATACCAGTT...TTCGTCTGGTGTTTTAAGTGCCACTCTCCTTGGCATGAAGGTGTTAACTGCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519565.5
CDS GCA 90 bp AAAAGGCAGGAGTTCCTGGGAAGTATCCTCAAGCCTCTTATCATTTaGAGGAGACTGTATATGCTTCAGGTTACACAAAACTTGACTCTT +
Preference number: 5 (lower is better)
Translates to: KRQEFLGSILKPLII*RRLYMLQVTQNLTL
Trigger: AAGAGTCAAGTTTTGTGTAACCTGAAGCATATACAGTCTCCTGCAAATGATAAGAGGCTTGAGGATACTTCCCAGGAACTCCTGCCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519799.5
CDS-3UTR CAA 90 bp TCTGAAAAGTGGCCTTGCTTGTTGGTACAGATAGGACTTCAGCTATTAACACCACACTGGATTTTGTATTaGCTTTCTGATCTGGAAGGG +
Preference number: 5 (lower is better)
Translates to: SEKWPCLLVQIGLQLLTPHWILY*LSDLEG
Trigger: CCCTTCCAGATCAGAAAGCAAATACAAAATCCAGTG...TGGTGTTAATAGCTGAAGTCCTATCTGTACCAACAAGCAAGGCCACTTTTCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359704.2
ENST00000368414.6
ENST00000519565.5
ENST00000560949.5
CDS-3UTR CAA 90 bp TCTGAAAAGTGGCCTTGCTTGTTGGTACAGATAGGACTTCAGCTATTAACACCAGTAGGGCACTGGATTTaGTATTTGCTTTCTGATCTG +
Preference number: 5 (lower is better)
Translates to: SEKWPCLLVQIGLQLLTPVGHWI*YLLSDL
Trigger: CAGATCAGAAAGCAAATACAAAATCCAGTGCCCTAC...TGGTGTTAATAGCTGAAGTCCTATCTGTACCAACAAGCAAGGCCACTTTTCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359704.2
ENST00000368414.6
ENST00000519565.5
ENST00000560949.5
CDS-3UTR CAA 90 bp AAAACACCAGACGAATTGGCAGGTAGGGCACTGGATCTGTTCATCACAAAGAACATCCTGCCATTTTGTTaGTATTTGCTTTCTGATCTG +
Preference number: 5 (lower is better)
Translates to: KTPDELAGRALDLFITKNILPFC*YLLSDL
Trigger: CAGATCAGAAAGCAAATACAAACAAAATGGCAGGAT...GTTCTTTGTGATGAACAGATCCAGTGCCCTACCTGCCAATTCGTCTGGTGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432158.6
CDS-3UTR CAA 90 bp ATTCTGTGTTATTCAGAAAGAATGAAAGCATGCTGGATTGTTATTCACGCAAGTGATCTGACACTTGGGTaGCTTTTACCGCCAGCAGCA +
Preference number: 5 (lower is better)
Translates to: ILCYSERMKACWIVIHASDLTLG*LLPPAA
Trigger: TGCTGCTGGCGGTAAAAGCAACCCAAGTGTCAGATC...ACTTGCGTGAATAACAATCCAGCATGCTTTCATTCTTTCTGAATAACACAGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519565.5
CDS-3UTR CAA 90 bp CTATTAACACCAAGTCTCACAAGATGGCCTGGAAGGAGGTGCAGAGTTCAAAGAACATTGCATGATGTATaGCACACATCATGTGGTAAA +
Preference number: 5 (lower is better)
Translates to: LLTPSLTRWPGRRCRVQRTLHDV*HTSCGK
Trigger: TTTACCACATGATGTGTGCAATACATCATGCAATGT...TCTTTGAACTCTGCACCTCCTTCCAGGCCATCTTGTGAGACTTGGTGTTAATAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519565.5
CDS-3UTR CAA 90 bp TCAATACGGCCAAGTTCCAAGAAGTACTTATACTTGATGGAGTCTTCATGCGTTCAGTTGGTCATATACTaGGGTGGTAAGGTTGAAAGA +
Preference number: 5 (lower is better)
Translates to: SIRPSSKKYLYLMESSCVQLVIY*GGKVER
Trigger: TCTTTCAACCTTACCACCCAAGTATATGACCAACTG...AACGCATGAAGACTCCATCAAGTATAAGTACTTCTTGGAACTTGGCCGTATTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519565.5
CDS-3UTR CAA 90 bp TTGCTTGTTGGTACAGATAGGACTTCAGCTATTAACACCAAGTCTCACAAGATGGGTATCTTCATTTGCTaGACTTACTTCTTGGCAGAG +
Preference number: 5 (lower is better)
Translates to: LLVGTDRTSAINTKSHKMGIFIC*TYFLAE
Trigger: CTCTGCCAAGAAGTAAGTCAAGCAAATGAAGATACC...CATCTTGTGAGACTTGGTGTTAATAGCTGAAGTCCTATCTGTACCAACAAGCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519565.5
CDS-3UTR CAA 90 bp TCGGAGCTGGCGGTATCTCTCACCACATCGGTAACAAAAATTAGTGTTACATTGTACGCAAACACAATATaGATCTTACAACAGTCACGA +
Preference number: 5 (lower is better)
Translates to: SELAVSLTTSVTKISVTLYANTI*ILQQSR
Trigger: TCGTGACTGTTGTAAGATCAATATTGTGTTTGCGTA...CAATGTAACACTAATTTTTGTTACCGATGTGGTGAGAGATACCGCCAGCTCCGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000519565.5
CDS-3UTR CAA 90 bp CATTTGAAAGATAAAAGAATTATACTGCTGGGGCCACAGATTATAATAGGTGCACTGTGGAGCCAAATGTaGGGTTTGATTCCTGGTTCT +
Preference number: 5 (lower is better)
Translates to: HLKDKRIILLGPQIIIGALWSQM*GLIPGS
Trigger: AGAACCAGGAATCAAACCCAACATTTGGCTCCACAG...TGCACCTATTATAATCTGTGGCCCCAGCAGTATAATTCTTTTATCTTTCAAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359704.2
ENST00000560949.5
CDS-3UTR CAA 90 bp CATTTGAAAGATAAAAGAATTATACTGCTGGGGCCACAGATTATAATAGGTGCATCTGTGATGGGGCATTaGATTTCTACTTGGCCAAGT +
Preference number: 5 (lower is better)
Translates to: HLKDKRIILLGPQIIIGASVMGH*ISTWPS
Trigger: ACTTGGCCAAGTAGAAATCAAATGCCCCATCACAGA...TGCACCTATTATAATCTGTGGCCCCAGCAGTATAATTCTTTTATCTTTCAAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000359704.2
ENST00000368414.6
ENST00000519565.5
ENST00000560949.5
CDS-3UTR CAA 90 bp CTCCCAAAAGTTACTACTACTGTTTTACCTTCAAAGTTGGCACTGACATATAAATCTGTGATGGGGCATTaGATTTCTACTTGGCCAAGT +
Preference number: 5 (lower is better)
Translates to: LPKVTTTVLPSKLALTYKSVMGH*ISTWPS
Trigger: ACTTGGCCAAGTAGAAATCAAATGCCCCATCACAGA...TTTATATGTCAGTGCCAACTTTGAAGGTAAAACAGTAGTAGTAACTTTTGGGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000519565.5
ENST00000560949.5
CDS-3UTR CAA 90 bp TTGAAAGATAAAAGAATTATACTGCTGGGGCCACAGATTATAATAGGTGCATTCGAAAAGTGGCCTTGCTaGTTGGTACAGATAGGACTT +
Preference number: 5 (lower is better)
Translates to: LKDKRIILLGPQIIIGAFEKWPC*LVQIGL
Trigger: AAGTCCTATCTGTACCAACAAGCAAGGCCACTTTTC...GAATGCACCTATTATAATCTGTGGCCCCAGCAGTATAATTCTTTTATCTTTCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000359704.2
ENST00000368414.6
ENST00000519565.5
ENST00000560949.5
CDS-3UTR CAA 90 bp AGAATTATACTGCTGGGGCCACAGATTATAATAGGTGCATTCAGTGAACTCTTACAAAAGCAGCTGATATaGGACAAACTCAAGAACATA +
Preference number: 5 (lower is better)
Translates to: RIILLGPQIIIGAFSELLQKQLI*DKLKNI
Trigger: TATGTTCTTGAGTTTGTCCAATATCAGCTGCTTTTG...TAAGAGTTCACTGAATGCACCTATTATAATCTGTGGCCCCAGCAGTATAATTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519565.5
ENST00000560949.5
CDS-3UTR CAA 90 bp GCACCACTGAATCTTGATACCACAGCAGAGAAAGTACAATTAAAGATATCATGTATGTTATTCAGCCCGTaGGTATATATGTATATGGCA +
Preference number: 5 (lower is better)
Translates to: APLNLDTTAEKVQLKISCMLFSP*VYMYMA
Trigger: TGCCATATACATATATACCAACGGGCTGAATAACAT...ACATGATATCTTTAATTGTACTTTCTCTGCTGTGGTATCAAGATTCAGTGGTGC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519565.5
CDS-3UTR CAA 90 bp CATTTGAAAGATAAAAGAATTATACTGCTGGGGCCACAGATTATAATAGGTGCAATTTTAGGAGAACAGTaGGTCATATACTTGGGTGGT +
Preference number: 5 (lower is better)
Translates to: HLKDKRIILLGPQIIIGAILGEQ*VIYLGG
Trigger: ACCACCCAAGTATATGACCAACTGTTCTCCTAAAAT...TGCACCTATTATAATCTGTGGCCCCAGCAGTATAATTCTTTTATCTTTCAAATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000519565.5
CDS GCA 72 bp AGGCCCGGTGAGTGCCAGTCCCGCAGGCTGCGCCGGTaGTCGGCTCTTACTCCAGCCCGGGGGCCCCAGGCT +
Preference number: 6 (lower is better)
Translates to: RPGECQSRRLRR*SALTPARGPQA
Trigger: AGCCTGGGGCCCCCGGGCTGGAGTAAGAGCCGAGCACCGGCGCAGCCTGCGGGACTGGCACTCACCGGGCCT
75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000521654.7
ENST00000560949.5
CDS CCA 72 bp GGTGCTGGGAGGGTTCAACACTGGCGGAGCCCCAGGTaGCGACGCGGGCGGCGAGAGCTGCTCCGAGGCGGG +
Preference number: 6 (lower is better)
Translates to: GAGRVQHWRSPR*RRGRRELLRGG
Trigger: CCCGCCTCGGAGCAGCTCTCGCCGCCCGCGTCGCCACCTGGGGCTCCGCCAGTGTTGAACCCTCCCAGCACC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000521654.7
ENST00000560949.5
CDS GCA 72 bp GGATTGAGAGGCCCGGTGAGTGCCAGTCCCGCAGGCTaGGCCGGTGCTCGGCTCTTACTCCAGCCCGGGGGC +
Preference number: 6 (lower is better)
Translates to: GLRGPVSASPAG*AGARLLLQPGG
Trigger: GCCCCCGGGCTGGAGTAAGAGCCGAGCACCGGCGCAGCCTGCGGGACTGGCACTCACCGGGCCTCTCAATCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000521654.7
ENST00000560949.5
CDS CCA 72 bp GGGGAAGGAAGAGCGGGTGCTGGGAGGGTTCAACACTaGCGGAGCCCCAGGTGGCGACGCGGGCGGCGAGAG +
Preference number: 6 (lower is better)
Translates to: GEGRAGAGRVQH*RSPRWRRGRRE
Trigger: CTCTCGCCGCCCGCGTCGCCACCTGGGGCTCCGCCAGTGTTGAACCCTCCCAGCACCCGCTCTTCCTTCCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000521654.7
ENST00000560949.5
CDS TCA 72 bp CAGAAGACTTGTCTCTTGGCGAGGGACGGGCGCCGCTaGCCCAGCACGTCCAGGACCAGTCCGTCGGCGGCC +
Preference number: 6 (lower is better)
Translates to: QKTCLLARDGRR*PSTSRTSPSAA
Trigger: GGCCGCCGACGGACTGGTCCTGGACGTGCTGGGTCAGCGGCGCCCGTCCCTCGCCAAGAGACAAGTCTTCTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000521654.7
ENST00000560949.5
CDS GCA 72 bp ACGGCTCGGGCGCCAGGTAGAACTCCAGCTCGATGCTaGCGCCGTCGGGGGAGAGGGAATCCGTTGGGAGGG +
Preference number: 6 (lower is better)
Translates to: TARAPGRTPARC*RRRGRGNPLGG
Trigger: CCCTCCCAACGGATTCCCTCTCCCCCGACGGCGGCAGCATCGAGCTGGAGTTCTACCTGGCGCCCGAGCCGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000521654.7
ENST00000560949.5
CDS CAA 90 bp GGCCTCGGGCAGGTCGCTCTCCACGCAGTACACGGAGCAGAAGACTaGTCTCTTGGCGAGGGACGGGCGCCGCTGACCCAGCACGTCCAG +
Preference number: 6 (lower is better)
Translates to: GLGQVALHAVHGAED*SLGEGRAPLTQHVQ
Trigger: CTGGACGTGCTGGGTCAGCGGCGCCCGTCCCTCGCCAAGAGACAAGTCTTCTGCTCCGTGTACTGCGTGGAGAGCGACCTGCCCGAGGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000521654.7
ENST00000560949.5
CDS GCA 72 bp AGAACGGCTCGGGCGCCAGGTAGAACTCCAGCTCGATaGTGCCGCCGTCGGGGGAGAGGGAATCCGTTGGGA +
Preference number: 6 (lower is better)
Translates to: RTARAPGRTPAR*CRRRGRGNPLG
Trigger: TCCCAACGGATTCCCTCTCCCCCGACGGCGGCAGCATCGAGCTGGAGTTCTACCTGGCGCCCGAGCCGTTCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000521654.7
ENST00000560949.5
CDS CCA 72 bp GGCCAGAGTAGGGTGGAGCTCCCAACAGGCTGGGCATaGAGAACGGCTCGGGCGCCAGGTAGAACTCCAGCT +
Preference number: 6 (lower is better)
Translates to: GQSRVELPTGWA*RTARAPGRTPA
Trigger: AGCTGGAGTTCTACCTGGCGCCCGAGCCGTTCTCCATGCCCAGCCTGTTGGGAGCTCCACCCTACTCTGGCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000521654.7
ENST00000560949.5
CDS TCA 72 bp GCTTGTCTTCCAGGCACACCCGGCACATCAGCACCATaGGGGGCACATAGGGATCCCCTACACCGCCCAGGC +
Preference number: 6 (lower is better)
Translates to: ACLPGTPGTSAP*GAHRDPLHRPG
Trigger: GCCTGGGCGGTGTAGGGGATCCCTATGTGCCCCTCATGGTGCTGATGTGCCGGGTGTGCCTGGAAGACAAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000519971.1
ENST00000521654.7
ENST00000560949.5
CDS CCA 72 bp TCTCCACGCAGTACACGGAGCAGAAGACTTGTCTCTTaGCGAGGGACGGGCGCCGCTGACCCAGCACGTCCA +
Preference number: 6 (lower is better)
Translates to: SPRSTRSRRLVS*RGTGAADPARP
Trigger: TGGACGTGCTGGGTCAGCGGCGCCCGTCCCTCGCCAAGAGACAAGTCTTCTGCTCCGTGTACTGCGTGGAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000521654.7
ENST00000560949.5
CDS CAA 90 bp TCCTCGCACACGGCCTTCTTGCAGCAAGGCAGGGGCTTGATGGGCTaGTCTTCCAGGCACACCCGGCACATCAGCACCATGAGGGGCACA +
Preference number: 6 (lower is better)
Translates to: SSHTAFLQQGRGLMG*SSRHTRHISTMRGT
Trigger: TGTGCCCCTCATGGTGCTGATGTGCCGGGTGTGCCTGGAAGACAAGCCCATCAAGCCCCTGCCTTGCTGCAAGAAGGCCGTGTGCGAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000519565.5
ENST00000519971.1
ENST00000521654.7
ENST00000560949.5
CDS TCA 72 bp GCCACTGCACTCCAGCCTGGGCGCTCAGGTAGACTTTaGGGCACTCCTCGCACACGGCCTTCTTGCAGCAAG +
Preference number: 6 (lower is better)
Translates to: ATALQPGRSGRL*GTPRTRPSCSK
Trigger: CTTGCTGCAAGAAGGCCGTGTGCGAGGAGTGCCTCAAAGTCTACCTGAGCGCCCAGGCTGGAGTGCAGTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519565.5
CDS CAA 72 bp ACGGCCTTCTTGCAGCAAGGCAGGGGCTTGATGGGCTaGTCTTCCAGGCACACCCGGCACATCAGCACCATG +
Preference number: 6 (lower is better)
Translates to: TAFLQQGRGLMG*SSRHTRHISTM
Trigger: CATGGTGCTGATGTGCCGGGTGTGCCTGGAAGACAAGCCCATCAAGCCCCTGCCTTGCTGCAAGAAGGCCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000519565.5
ENST00000519971.1
ENST00000521654.7
ENST00000560949.5
CDS TCA 72 bp CAGAGTGAGACTCCGTCTGGGCGCTCAGGTAGACTTTaGGGCACTCCTCGCACACGGCCTTCTTGCAGCAAG +
Preference number: 6 (lower is better)
Translates to: QSETPSGRSGRL*GTPRTRPSCSK
Trigger: CTTGCTGCAAGAAGGCCGTGTGCGAGGAGTGCCTCAAAGTCTACCTGAGCGCCCAGACGGAGTCTCACTCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519971.1
CDS TCA 72 bp CTTGGCCAAGTTGTACCTGGGCGCTCAGGTAGACTTTaGGGCACTCCTCGCACACGGCCTTCTTGCAGCAAG +
Preference number: 6 (lower is better)
Translates to: LGQVVPGRSGRL*GTPRTRPSCSK
Trigger: CTTGCTGCAAGAAGGCCGTGTGCGAGGAGTGCCTCAAAGTCTACCTGAGCGCCCAGGTACAACTTGGCCAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000521654.7
ENST00000560949.5
CDS CCA 72 bp GGGTGCCATACTGTGGCCATGAATCTCACGATTGGTTaGCTGGGGTATCCATGTCAGTGCTCTCCTTACCTT +
Preference number: 6 (lower is better)
Translates to: GCHTVAMNLTIG*LGYPCQCSPYL
Trigger: AAGGTAAGGAGAGCACTGACATGGATACCCCAGCCAACCAATCGTGAGATTCATGGCCACAGTATGGCACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432158.6
CDS CAA 72 bp AGGGTGCCATACTGTGGCCATGAATCTCACGATTGGTaGGCTGGGGTATCCATGTCAGTGCTCTCCTTACCT +
Preference number: 6 (lower is better)
Translates to: RVPYCGHESHDW*AGVSMSVLSLP
Trigger: AGGTAAGGAGAGCACTGACATGGATACCCCAGCCAACCAATCGTGAGATTCATGGCCACAGTATGGCACCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432158.6
CDS CCA 72 bp TGCCAAGGAGAGTGGCACTTAAAACACCAGACGAATTaGCAGGTAGGGCACTGGATCTTAAATGGAGATGAC +
Preference number: 6 (lower is better)
Translates to: CQGEWHLKHQTN*QVGHWILNGDD
Trigger: GTCATCTCCATTTAAGATCCAGTGCCCTACCTGCCAATTCGTCTGGTGTTTTAAGTGCCACTCTCCTTGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368415.2
CDS CAA 72 bp TTCAAAACACTCTGTGATGGGGCATTTGATTTCTACTaGGCCAAGTTGTACCTGGGCGCTCAGGTAGACTTT +
Preference number: 6 (lower is better)
Translates to: FKTLCDGAFDFY*AKLYLGAQVDF
Trigger: AAAGTCTACCTGAGCGCCCAGGTACAACTTGGCCAAGTAGAAATCAAATGCCCCATCACAGAGTGTTTTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000521654.7
ENST00000560949.5
CDS CAA 72 bp GGAGTTCCTGGGAAGTATCCTCAAGCCTCTTATCATTaGCAGGAGACTGTATATGCTTCAGGTTACACAAAA +
Preference number: 6 (lower is better)
Translates to: GVPGKYPQASYH*QETVYASGYTK
Trigger: TTTTGTGTAACCTGAAGCATATACAGTCTCCTGCAAATGATAAGAGGCTTGAGGATACTTCCCAGGAACTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519799.5
CDS CAA 90 bp AAGTGCTGGCAATGGACACTGTATATGCTTCAGGTTACACAAAACTaGACTCTTCCCCTCATTATGAAGTTTGCCTTCAAGAGCCAATGT +
Preference number: 6 (lower is better)
Translates to: KCWQWTLYMLQVTQN*TLPLIMKFAFKSQC
Trigger: ACATTGGCTCTTGAAGGCAAACTTCATAATGAGGGGAAGAGTCAAGTTTTGTGTAACCTGAAGCATATACAGTGTCCATTGCCAGCACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359704.2
CDS CAA 90 bp AAAAAGGCAGGAGTTCCTGGGAAGTATCCTCAAGCCTCTTATCATTaGCAGGAGACTGTATATGCTTCAGGTTACACAAAACTTGACTCT +
Preference number: 6 (lower is better)
Translates to: KKAGVPGKYPQASYH*QETVYASGYTKLDS
Trigger: AGAGTCAAGTTTTGTGTAACCTGAAGCATATACAGTCTCCTGCAAATGATAAGAGGCTTGAGGATACTTCCCAGGAACTCCTGCCTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000519799.5
CDS CCA 72 bp CTGAGTTTGGCTGTAATCTCTAGACCTAAGTTTGAGTaGCAGCCTTTCGCTTCCTCAAAACATGTAATTAAG +
Preference number: 6 (lower is better)
Translates to: LSLAVISRPKFE*QPFASSKHVIK
Trigger: CTTAATTACATGTTTTGAGGAAGCGAAAGGCTGCCACTCAAACTTAGGTCTAGAGATTACAGCCAAACTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454842.2
CDS CAA 72 bp TTCAAAACACTCTGTGATGGGGCATTTGATTTCTACTaGGCCAAGTTGTACCTTCATCCCTTTCTTGAACTG +
Preference number: 6 (lower is better)
Translates to: FKTLCDGAFDFY*AKLYLHPFLEL
Trigger: CAGTTCAAGAAAGGGATGAAGGTACAACTTGGCCAAGTAGAAATCAAATGCCCCATCACAGAGTGTTTTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359704.2
CDS CAA 72 bp TGCAGGAGACTGTATATGCTTCAGGTTACACAAAACTaGACTCTTCCCCTCATTATGAAGTTTGCCTTCAAG +
Preference number: 6 (lower is better)
Translates to: CRRLYMLQVTQN*TLPLIMKFAFK
Trigger: CTTGAAGGCAAACTTCATAATGAGGGGAAGAGTCAAGTTTTGTGTAACCTGAAGCATATACAGTCTCCTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519799.5
CDS CAA 90 bp ACTTGGCCAAGTTGTACACTGTATATGCTTCAGGTTACACAAAACTaGACTCTTCCCCTCATTATGAAGTTTGCCTTCAAGAGCCAATGT +
Preference number: 6 (lower is better)
Translates to: TWPSCTLYMLQVTQN*TLPLIMKFAFKSQC
Trigger: ACATTGGCTCTTGAAGGCAAACTTCATAATGAGGGGAAGAGTCAAGTTTTGTGTAACCTGAAGCATATACAGTGTACAACTTGGCCAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368414.6
CDS CAA 90 bp CTTATCATTTGCAGGAGACTGTATATGCTTCAGGTTACACAAAACTaGACTCTTCCCCTCATTATGAAGTTTGCCTTCAAGAGCCAATGT +
Preference number: 6 (lower is better)
Translates to: LIICRRLYMLQVTQN*TLPLIMKFAFKSQC
Trigger: ACATTGGCTCTTGAAGGCAAACTTCATAATGAGGGGAAGAGTCAAGTTTTGTGTAACCTGAAGCATATACAGTCTCCTGCAAATGATAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519799.5
CDS CCA 72 bp TCAAAACACTCTGTGATGGGGCATTTGATTTCTACTTaGCCAAGTTGTACACTGTATATGCTTCAGGTTACA +
Preference number: 6 (lower is better)
Translates to: SKHSVMGHLIST*PSCTLYMLQVT
Trigger: TGTAACCTGAAGCATATACAGTGTACAACTTGGCCAAGTAGAAATCAAATGCCCCATCACAGAGTGTTTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368414.6
CDS CAA 72 bp CAATGGACACTGTATATGCTTCAGGTTACACAAAACTaGACTCTTCCCCTCATTATGAAGTTTGCCTTCAAG +
Preference number: 6 (lower is better)
Translates to: QWTLYMLQVTQN*TLPLIMKFAFK
Trigger: CTTGAAGGCAAACTTCATAATGAGGGGAAGAGTCAAGTTTTGTGTAACCTGAAGCATATACAGTGTCCATTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359704.2
CDS CAA 72 bp TTCAAAACACTCTGTGATGGGGCATTTGATTTCTACTaGGCCAAGTTGTACACTGTATATGCTTCAGGTTAC +
Preference number: 6 (lower is better)
Translates to: FKTLCDGAFDFY*AKLYTVYASGY
Trigger: GTAACCTGAAGCATATACAGTGTACAACTTGGCCAAGTAGAAATCAAATGCCCCATCACAGAGTGTTTTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368414.6
CDS CAA 72 bp AGTTGTACACTGTATATGCTTCAGGTTACACAAAACTaGACTCTTCCCCTCATTATGAAGTTTGCCTTCAAG +
Preference number: 6 (lower is better)
Translates to: SCTLYMLQVTQN*TLPLIMKFAFK
Trigger: CTTGAAGGCAAACTTCATAATGAGGGGAAGAGTCAAGTTTTGTGTAACCTGAAGCATATACAGTGTACAACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368414.6
CDS CAA 72 bp CTCCTTACCTTAAATGGAGATGACTCCAAACAGCCTTaGAAACCACTTCATCCTGCCATTTTGTTTGTATTT +
Preference number: 6 (lower is better)
Translates to: LLTLNGDDSKQP*KPLHPAILFVF
Trigger: AAATACAAACAAAATGGCAGGATGAAGTGGTTTCAAAGGCTGTTTGGAGTCATCTCCATTTAAGGTAAGGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432158.6
CDS TCA 72 bp GTGTGGATGAGAAGAGAACTAATTATACAACAGCTTTaGTTCTCCTACTCTTTATCTTTACTCAAGTGCTGG +
Preference number: 6 (lower is better)
Translates to: VWMRRELIIQQL*FSYSLSLLKCW
Trigger: CCAGCACTTGAGTAAAGATAAAGAGTAGGAGAATCAAAGCTGTTGTATAATTAGTTCTCTTCTCATCCACAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359704.2
ENST00000431104.2
ENST00000519799.5