RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RNF216 (Homo sapiens)

Ensembl gene IDs: ENSG00000011275

Ensembl transcript IDs: ENST00000389900.8, ENST00000389902.8, ENST00000411812.1, ENST00000416985.5, ENST00000425013.6, ENST00000469375.1, ENST00000476345.1, ENST00000484458.2

Found 758 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TGCCCTTGGCCCAACCGTGGGCCCCTCCAGGGAGATGCTCTCGGCTaGCTTGCTACCCAGGGGTCGGCTCCGAGGAGAGGCCCAGGTGTG +
Preference number: 1 (lower is better)
Translates to: CPWPNRGPLQGDALG*LATQGSAPRRGPGV
Trigger: CACACCTGGGCCTCTCCTCGGAGCCGACCCCTGGGTAGCAAGGCAGCCGAGAGCATCTCCCTGGAGGGGCCCACGGTTGGGCCAAGGGCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
3UTR CCA 90 bp CCGCACGGGAGGCAGGGGGAAGGGTGGGTGCGCGAAGGCATAGGGTaGCATCTGTGGCTGTGGCAGGTTCTGCGGAACGGGCCTCGGGAG +
Preference number: 1 (lower is better)
Translates to: PHGRQGEGWVREGIG*HLWLWQVLRNGPRE
Trigger: CTCCCGAGGCCCGTTCCGCAGAACCTGCCACAGCCACAGATGCCACCCTATGCCTTCGCGCACCCACCCTTCCCCCTGCCTCCCGTGCGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389900.8
3UTR CCA 90 bp AAGCCAATGGCAGCGAATGACGGTGCCCGCCTGCCCCAGGCACCTTaGGTGGGCCAGGCCCTGCTTCAGGAGGTGGCGGGCCACTCCGGA +
Preference number: 1 (lower is better)
Translates to: KPMAANDGARLPQAP*VGQALLQEVAGHSG
Trigger: TCCGGAGTGGCCCGCCACCTCCTGAAGCAGGGCCTGGCCCACCCAAGGTGCCTGGGGCAGGCGGGCACCGTCATTCGCTGCCATTGGCTT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
3UTR GCA 90 bp TTGGCCCAACCGTGGGCCCCTCCAGGGAGATGCTCTCGGCTGCCTTaGTACCCAGGGGTCGGCTCCGAGGAGAGGCCCAGGTGTGAGCAG +
Preference number: 1 (lower is better)
Translates to: LAQPWAPPGRCSRLP*YPGVGSEERPRCEQ
Trigger: CTGCTCACACCTGGGCCTCTCCTCGGAGCCGACCCCTGGGTAGCAAGGCAGCCGAGAGCATCTCCCTGGAGGGGCCCACGGTTGGGCCAA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
3UTR CCA 90 bp GGGGAAGGGTGGGTGCGCGAAGGCATAGGGTGGCATCTGTGGCTGTaGCAGGTTCTGCGGAACGGGCCTCGGGAGGGCCTCCACCCTCTG +
Preference number: 1 (lower is better)
Translates to: GEGWVREGIGWHLWL*QVLRNGPREGLHPL
Trigger: CAGAGGGTGGAGGCCCTCCCGAGGCCCGTTCCGCAGAACCTGCCACAGCCACAGATGCCACCCTATGCCTTCGCGCACCCACCCTTCCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389900.8
3UTR CCA 90 bp AGGCAGGGGGAAGGGTGGGTGCGCGAAGGCATAGGGTGGCATCTGTaGCTGTGGCAGGTTCTGCGGAACGGGCCTCGGGAGGGCCTCCAC +
Preference number: 1 (lower is better)
Translates to: RQGEGWVREGIGWHL*LWQVLRNGPREGLH
Trigger: GTGGAGGCCCTCCCGAGGCCCGTTCCGCAGAACCTGCCACAGCCACAGATGCCACCCTATGCCTTCGCGCACCCACCCTTCCCCCTGCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389900.8
3UTR GCA 90 bp GGCAGTCCAACAGGTATGGGCGCCAGCAAGGACATAGCAGCAGGCTaGCCCCAAGCCCGGCCTCCCTGCGCACCCTTACCCCAGGTCCAG +
Preference number: 1 (lower is better)
Translates to: GSPTGMGASKDIAAG*PQARPPCAPLPQVQ
Trigger: CTGGACCTGGGGTAAGGGTGCGCAGGGAGGCCGGGCTTGGGGGCAGCCTGCTGCTATGTCCTTGCTGGCGCCCATACCTGTTGGACTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
3UTR CCA 90 bp AGAACCAGGGTGGGTGCTCACGGCAGCCCTGTGGTCCCCCGTGCCTaGCTCGGGGAGGATCCTCAGGAATCAGGGACCCTCCAAGGAAAG +
Preference number: 1 (lower is better)
Translates to: RTRVGAHGSPVVPRA*LGEDPQESGTLQGK
Trigger: CTTTCCTTGGAGGGTCCCTGATTCCTGAGGATCCTCCCCGAGCCAGGCACGGGGGACCACAGGGCTGCCGTGAGCACCCACCCTGGTTCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
3UTR TCA 90 bp GCCCCCAAGCCCGGCCTCCCTGCGCACCCTTACCCCAGGTCCAGGTaGCCACCTGTCTTCAAAGCCTCCATCCTGGGCAAAGGCAGAAAG +
Preference number: 1 (lower is better)
Translates to: APKPGLPAHPYPRSR*PPVFKASILGKGRK
Trigger: CTTTCTGCCTTTGCCCAGGATGGAGGCTTTGAAGACAGGTGGTCACCTGGACCTGGGGTAAGGGTGCGCAGGGAGGCCGGGCTTGGGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
3UTR CCA 90 bp CCCTCCAAGGAAAGAGGCCGCCGCTCCTTCCCCACCAGCCCAGTGTaGCCAGAACAGCTGGAACTCCTCTCAAATGACCCACCCCTGGGG +
Preference number: 1 (lower is better)
Translates to: PSKERGRRSFPTSPV*PEQLELLSNDPPLG
Trigger: CCCCAGGGGTGGGTCATTTGAGAGGAGTTCCAGCTGTTCTGGCCACACTGGGCTGGTGGGGAAGGAGCGGCGGCCTCTTTCCTTGGAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
3UTR CCA 90 bp AGGCCCAGGTGTGAGCAGCAGGGACCTGGTCTATGGCCTATGCCATaGACAAGGCAGAAGGACTGCCGTTGGTGGCCTGGGGGATGCGAG +
Preference number: 1 (lower is better)
Translates to: RPRCEQQGPGLWPMP*TRQKDCRWWPGGCE
Trigger: CTCGCATCCCCCAGGCCACCAACGGCAGTCCTTCTGCCTTGTCCATGGCATAGGCCATAGACCAGGTCCCTGCTGCTCACACCTGGGCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
3UTR CCA 90 bp GGCTCCGAGGAGAGGCCCAGGTGTGAGCAGCAGGGACCTGGTCTATaGCCTATGCCATGGACAAGGCAGAAGGACTGCCGTTGGTGGCCT +
Preference number: 1 (lower is better)
Translates to: GSEERPRCEQQGPGL*PMPWTRQKDCRWWP
Trigger: AGGCCACCAACGGCAGTCCTTCTGCCTTGTCCATGGCATAGGCCATAGACCAGGTCCCTGCTGCTCACACCTGGGCCTCTCCTCGGAGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
3UTR CCA 90 bp AGGAGGTGGCGGGCCACTCCGGAGACTGATGCAGCCCCACCCCAATaGTTGTCGGACTCAGCTGTGTCTGAGGTCTGTGAACTCCCAGCC +
Preference number: 1 (lower is better)
Translates to: RRWRATPETDAAPPQ*LSDSAVSEVCELPA
Trigger: GGCTGGGAGTTCACAGACCTCAGACACAGCTGAGTCCGACAACCATTGGGGTGGGGCTGCATCAGTCTCCGGAGTGGCCCGCCACCTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
3UTR CCA 90 bp GAGAGGTGCCCTCAACACTCACTGCAGTGGCGCACGGGTTTTGGATaGGGGGACAGCATCTTGGCCCTCACAGCTGTGGCAGTGCCTCTG +
Preference number: 1 (lower is better)
Translates to: ERCPQHSLQWRTGFG*GDSILALTAVAVPL
Trigger: CAGAGGCACTGCCACAGCTGTGAGGGCCAAGATGCTGTCCCCCCATCCAAAACCCGTGCGCCACTGCAGTGAGTGTTGAGGGCACCTCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
3UTR CCA 90 bp GGGCCACCAGGCCTCTGTCCCAGCTGCCTTAAGAGGCTCTTTCAATaGGCCAGCTTCAGAACCATCCAGTGTACCGCAGCGGCCTGGCCT +
Preference number: 1 (lower is better)
Translates to: GPPGLCPSCLKRLFQ*ASFRTIQCTAAAWP
Trigger: AGGCCAGGCCGCTGCGGTACACTGGATGGTTCTGAAGCTGGCCCATTGAAAGAGCCTCTTAAGGCAGCTGGGACAGAGGCCTGGTGGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
3UTR CCA 90 bp AGATTCCTCTCTCCAGTTTTAAGGCAAGTAAGAGGGGGCTGTGGCTaGGGAGCCTCACGCCCTGCGGCAAGCCCTGCAGGGCAGAGAGAG +
Preference number: 1 (lower is better)
Translates to: RFLSPVLRQVRGGCG*GASRPAASPAGQRE
Trigger: CTCTCTCTGCCCTGCAGGGCTTGCCGCAGGGCGTGAGGCTCCCCAGCCACAGCCCCCTCTTACTTGCCTTAAAACTGGAGAGAGGAATCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
3UTR CCA 90 bp CAGTGTGGCCAGAACAGCTGGAACTCCTCTCAAATGACCCACCCCTaGGGTTTGGCCTTAGGAGAAACATCACTCTGGGCTCCCCCTCCC +
Preference number: 1 (lower is better)
Translates to: QCGQNSWNSSQMTHP*GLALGETSLWAPPP
Trigger: GGGAGGGGGAGCCCAGAGTGATGTTTCTCCTAAGGCCAAACCCCAGGGGTGGGTCATTTGAGAGGAGTTCCAGCTGTTCTGGCCACACTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
3UTR GCA 90 bp CGGAAAGCTACAGGACGGGCACCTGACAAGCTCGTCGGCGTAGGCTaGCGCAACCTCCTCCTCGGCTTTTCGCTCATAGTACTTATACAG +
Preference number: 1 (lower is better)
Translates to: RKATGRAPDKLVGVG*RNLLLGFSLIVLIQ
Trigger: CTGTATAAGTACTATGAGCGAAAAGCCGAGGAGGAGGTTGCGGCAGCCTACGCCGACGAGCTTGTCAGGTGCCCGTCCTGTAGCTTTCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389900.8
3UTR CCA 90 bp ATGGGCCAGCTTCAGAACCATCCAGTGTACCGCAGCGGCCTGGCCTaGGAAAGGATTTCTCAGCCTGACTTTCCAGAGACCGAGGATGAG +
Preference number: 1 (lower is better)
Translates to: MGQLQNHPVYRSGLA*ERISQPDFPETEDE
Trigger: CTCATCCTCGGTCTCTGGAAAGTCAGGCTGAGAAATCCTTTCCCAGGCCAGGCCGCTGCGGTACACTGGATGGTTCTGAAGCTGGCCCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
3UTR TCA 90 bp CCACCGCGCCGGGCCATCTTAGATCTTAGAGCCCACTTTAGTCCTTaGAATACATCTGAGAAGCCAATGGCAGCGAATGACGGTGCCCGC +
Preference number: 1 (lower is better)
Translates to: PPRRAILDLRAHFSP*NTSEKPMAANDGAR
Trigger: GCGGGCACCGTCATTCGCTGCCATTGGCTTCTCAGATGTATTTCAAGGACTAAAGTGGGCTCTAAGATCTAAGATGGCCCGGCGCGGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
3UTR GCA 90 bp GGGGAAGCACAGGGAGCATATTTAAGGTACCGAAGACAATCCTGTTaGTGCCGCATGGAGCCTGCCTTTCCAAGGCACTGTCGTTCAGGC +
Preference number: 1 (lower is better)
Translates to: GEAQGAYLRYRRQSC*CRMEPAFPRHCRSG
Trigger: GCCTGAACGACAGTGCCTTGGAAAGGCAGGCTCCATGCGGCAGCAACAGGATTGTCTTCGGTACCTTAAATATGCTCCCTGTGCTTCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
3UTR CCA 90 bp TCATCTTCAGTGGGATCGGTCCAGAGAGAGCATCTTGAACACTCCTaGCAAGGGGCTCCTGGTGAGCGGGGATGTTGGCAGAAATGGTCA +
Preference number: 1 (lower is better)
Translates to: SSSVGSVQREHLEHS*QGAPGERGCWQKWS
Trigger: TGACCATTTCTGCCAACATCCCCGCTCACCAGGAGCCCCTTGCCAGGAGTGTTCAAGATGCTCTCTCTGGACCGATCCCACTGAAGATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389900.8
3UTR CCA 90 bp ATCTTAGAGCCCACTTTAGTCCTTGAAATACATCTGAGAAGCCAATaGCAGCGAATGACGGTGCCCGCCTGCCCCAGGCACCTTGGGTGG +
Preference number: 1 (lower is better)
Translates to: ILEPTLVLEIHLRSQ*QRMTVPACPRHLGW
Trigger: CCACCCAAGGTGCCTGGGGCAGGCGGGCACCGTCATTCGCTGCCATTGGCTTCTCAGATGTATTTCAAGGACTAAAGTGGGCTCTAAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
3UTR CCA 90 bp GGGGAGGGGCAGTTCACATCGCAGCTCTCTCCGAACTCCACCATTTaGGACGTCTTTATTATGGATCCGTCCACTCTTCCAGGAGCAGTA +
Preference number: 1 (lower is better)
Translates to: GEGQFTSQLSPNSTI*DVFIMDPSTLPGAV
Trigger: TACTGCTCCTGGAAGAGTGGACGGATCCATAATAAAGACGTCCCAAATGGTGGAGTTCGGAGAGAGCTGCGATGTGAACTGCCCCTCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
3UTR CCA 90 bp TTTGCAGAACAAGTGAGCATCTGCGCACTGCGTCAGCTCCTCGAATaGAAATTCCCCATAGCAGCAGCGACACTCAATCAGCTGGCCATC +
Preference number: 1 (lower is better)
Translates to: FAEQVSICALRQLLE*KFPIAAATLNQLAI
Trigger: GATGGCCAGCTGATTGAGTGTCGCTGCTGCTATGGGGAATTTCCATTCGAGGAGCTGACGCAGTGCGCAGATGCTCACTTGTTCTGCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389900.8
3UTR CCA 90 bp GATCCGTCCACTCTTCCAGGAGCAGTAGCCCTTCTAGGAAAGGGGTaGGAAGAAAACCAGCCTACCCTTCAAGCTGACTTAGGATGCAAT +
Preference number: 1 (lower is better)
Translates to: DPSTLPGAVALLGKG*EENQPTLQADLGCN
Trigger: ATTGCATCCTAAGTCAGCTTGAAGGGTAGGCTGGTTTTCTTCCCACCCCTTTCCTAGAAGGGCTACTGCTCCTGGAAGAGTGGACGGATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
3UTR TCA 90 bp ACTGCCTCTTGGGCATATCTGATGAGACACTCTTTGCAGAACAAGTaGGCATCTGCGCACTGCGTCAGCTCCTCGAATGGAAATTCCCCA +
Preference number: 1 (lower is better)
Translates to: TASWAYLMRHSLQNK*ASAHCVSSSNGNSP
Trigger: TGGGGAATTTCCATTCGAGGAGCTGACGCAGTGCGCAGATGCTCACTTGTTCTGCAAAGAGTGTCTCATCAGATATGCCCAAGAGGCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389900.8
3UTR TCA 90 bp CATCATCATCCAGGTCCTCTTCTTCATGCTGCTGAGGAGCTGGGGTaGCCAGCATTGGAATCCTTTCCTCATCTGAGGAGTCAGATATGG +
Preference number: 1 (lower is better)
Translates to: HHHPGPLLHAAEELG*PALESFPHLRSQIW
Trigger: CCATATCTGACTCCTCAGATGAGGAAAGGATTCCAATGCTGGTCACCCCAGCTCCTCAGCAGCATGAAGAAGAGGACCTGGATGATGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411812.1
3UTR GCA 90 bp TTGGGCATATCTGATGAGACACTCTTTGCAGAACAAGTGAGCATCTaGGCACTGCGTCAGCTCCTCGAATGGAAATTCCCCATAGCAGCA +
Preference number: 1 (lower is better)
Translates to: LGISDETLFAEQVSI*ALRQLLEWKFPIAA
Trigger: TGCTGCTATGGGGAATTTCCATTCGAGGAGCTGACGCAGTGCGCAGATGCTCACTTGTTCTGCAAAGAGTGTCTCATCAGATATGCCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389900.8
3UTR GCA 90 bp ATATTTAAGGTACCGAAGACAATCCTGTTGCTGCCGCATGGAGCCTaGCTTTCCAAGGCACTGTCGTTCAGGCTAGTAGCAAAGTTCAGG +
Preference number: 1 (lower is better)
Translates to: IFKVPKTILLLPHGA*LSKALSFRLVAKFR
Trigger: CCTGAACTTTGCTACTAGCCTGAACGACAGTGCCTTGGAAAGGCAGGCTCCATGCGGCAGCAACAGGATTGTCTTCGGTACCTTAAATAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
3UTR CCA 90 bp CTCTTTGATTTTCTGCTCATAGAACTCCTGCTCTTGTTGCACAGCTaGAAGGAGAGCACGTCGGTCATAGGACCTACAATGTCGTCGCTT +
Preference number: 1 (lower is better)
Translates to: LFDFLLIELLLLLHS*KESTSVIGPTMSSL
Trigger: AAGCGACGACATTGTAGGTCCTATGACCGACGTGCTCTCCTTCCAGCTGTGCAACAAGAGCAGGAGTTCTATGAGCAGAAAATCAAAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389900.8
3UTR-3UTR GCA 90 bp CACACGGGGCAGGGGTGGCACCCAGGGTCACCTGTCTCCCTAAGGAGGCCCACTAGGTGCAGCCCCCTCTaGCCTTGGCCCAACCGTGGG +
Preference number: 2 (lower is better)
Translates to: HTGQGWHPGSPVSLRRPTRCSPL*PWPNRG
Trigger: CCCACGGTTGGGCCAAGGGCAGAGGGGGCTGCACCT...AGTGGGCCTCCTTAGGGAGACAGGTGACCCTGGGTGCCACCCCTGCCCCGTGTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
3UTR-3UTR CCA 90 bp GAAACCCAGGGCCGGACAGGAGGCGAGGAGGGTGAGTGGGGACATGGCAGGGCTCACACGGGGCAGGGGTaGCACCCAGGGTCACCTGTC +
Preference number: 2 (lower is better)
Translates to: ETQGRTGGEEGEWGHGRAHTGQG*HPGSPV
Trigger: GACAGGTGACCCTGGGTGCCACCCCTGCCCCGTGTG...AGCCCTGCCATGTCCCCACTCACCCTCCTCGCCTCCTGTCCGGCCCTGGGTTTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
3UTR-3UTR TCA 90 bp CACACGGGGCAGGGGTGGCACCCAGGGTCACCTGTCTCCCTAAGGAGGCCCACTGGAGAGGCCCAGGTGTaGGCAGCAGGGACCTGGTCT +
Preference number: 2 (lower is better)
Translates to: HTGQGWHPGSPVSLRRPTGEAQV*AAGTWS
Trigger: AGACCAGGTCCCTGCTGCTCACACCTGGGCCTCTCC...AGTGGGCCTCCTTAGGGAGACAGGTGACCCTGGGTGCCACCCCTGCCCCGTGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
3UTR-3UTR GCA 90 bp GCCCTGTGGTCCCCCGTGCCTGGCTCGGGGAGGATCCTCAGGAATCAGGGACCCTCACAGCTGTGGCAGTaGCTCTGCGGGCCATGGTCC +
Preference number: 2 (lower is better)
Translates to: ALWSPVPGSGRILRNQGPSQLWQ*LCGPWS
Trigger: GGACCATGGCCCGCAGAGGCACTGCCACAGCTGTGA...GGGTCCCTGATTCCTGAGGATCCTCCCCGAGCCAGGCACGGGGGACCACAGGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
3UTR-3UTR CCA 90 bp CCTCCAGGGAGATGCTCTCGGCTGCCTTGCTACCCAGGGGTCGGCTCCGAGGAGAAGGACTGCCGTTGGTaGCCTGGGGGATGCGAGGGG +
Preference number: 2 (lower is better)
Translates to: PPGRCSRLPCYPGVGSEEKDCRW*PGGCEG
Trigger: CCCCTCGCATCCCCCAGGCCACCAACGGCAGTCCTT...CTCCTCGGAGCCGACCCCTGGGTAGCAAGGCAGCCGAGAGCATCTCCCTGGAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
3UTR-3UTR CCA 90 bp ACAGCATCTTGGCCCTCACAGCTGTGGCAGTGCCTCTGCGGGCCATGGTCCCAGAGCCCCCTCTGCCCTTaGCCCAACCGTGGGCCCCTC +
Preference number: 2 (lower is better)
Translates to: TASWPSQLWQCLCGPWSQSPLCP*PNRGPL
Trigger: GAGGGGCCCACGGTTGGGCCAAGGGCAGAGGGGGCT...CTGGGACCATGGCCCGCAGAGGCACTGCCACAGCTGTGAGGGCCAAGATGCTGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
3UTR-3UTR TCA 90 bp TGCCTGTTGTCTGACCTGCTCTCTGGGCACTGGCACGGCCCCTTGCTGGCTGGTGCCAATGGCAGCGAATaGCGGTGCCCGCCTGCCCCA +
Preference number: 2 (lower is better)
Translates to: CLLSDLLSGHWHGPLLAGANGSE*RCPPAP
Trigger: TGGGGCAGGCGGGCACCGTCATTCGCTGCCATTGGC...ACCAGCCAGCAAGGGGCCGTGCCAGTGCCCAGAGAGCAGGTCAGACAACAGGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
3UTR-3UTR GCA 90 bp CACACGGGGCAGGGGTGGCACCCAGGGTCACCTGTCTCCCTAAGGAGGCCCACTGGAGATGCTCTCGGCTaGCTTGCTACCCAGGGGTCG +
Preference number: 2 (lower is better)
Translates to: HTGQGWHPGSPVSLRRPTGDALG*LATQGS
Trigger: CGACCCCTGGGTAGCAAGGCAGCCGAGAGCATCTCC...AGTGGGCCTCCTTAGGGAGACAGGTGACCCTGGGTGCCACCCCTGCCCCGTGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
3UTR-3UTR GCA 90 bp TGCCTGTTGTCTGACCTGCTCTCTGGGCACTGGCACGGCCCCTTGCTGGCTGGTATGACGGTGCCCGCCTaGCCCAGGCACCTTGGGTGG +
Preference number: 2 (lower is better)
Translates to: CLLSDLLSGHWHGPLLAGMTVPA*PRHLGW
Trigger: CCACCCAAGGTGCCTGGGGCAGGCGGGCACCGTCAT...ACCAGCCAGCAAGGGGCCGTGCCAGTGCCCAGAGAGCAGGTCAGACAACAGGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
3UTR-3UTR CCA 90 bp ACCCTCCAAGGAAAGAGGCCGCCGCTCCTTCCCCACCAGCCCAGTGTGGCCAGATGGCCCTCACAGCTGTaGCAGTGCCTCTGCGGGCCA +
Preference number: 2 (lower is better)
Translates to: TLQGKRPPLLPHQPSVARWPSQL*QCLCGP
Trigger: TGGCCCGCAGAGGCACTGCCACAGCTGTGAGGGCCA...TCTGGCCACACTGGGCTGGTGGGGAAGGAGCGGCGGCCTCTTTCCTTGGAGGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
3UTR-3UTR CCA 90 bp GCCCTGTGGTCCCCCGTGCCTGGCTCGGGGAGGATCCTCAGGAATCAGGGACCCCGCACGGGTTTTGGATaGGGGGACAGCATCTTGGCC +
Preference number: 2 (lower is better)
Translates to: ALWSPVPGSGRILRNQGPRTGFG*GDSILA
Trigger: GGCCAAGATGCTGTCCCCCCATCCAAAACCCGTGCG...GGGTCCCTGATTCCTGAGGATCCTCCCCGAGCCAGGCACGGGGGACCACAGGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
3UTR-3UTR TCA 90 bp ATAGTTGACCCGCACGTTGGGCAGAGGGGGCACGTACGGGGCTGGGATAGGCCCGCAAGGGGCTCCTGGTaGGCGGGGATGTTGGCAGAA +
Preference number: 2 (lower is better)
Translates to: IVDPHVGQRGHVRGWDRPARGSW*AGMLAE
Trigger: TTCTGCCAACATCCCCGCTCACCAGGAGCCCCTTGC...GGGCCTATCCCAGCCCCGTACGTGCCCCCTCTGCCCAACGTGCGGGTCAACTAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000389900.8
3UTR-3UTR GCA 90 bp CACACGGGGCAGGGGTGGCACCCAGGGTCACCTGTCTCCCTAAGGAGGCCCACTACAAGGCAGAAGGACTaGCGTTGGTGGCCTGGGGGA +
Preference number: 2 (lower is better)
Translates to: HTGQGWHPGSPVSLRRPTTRQKD*RWWPGG
Trigger: TCCCCCAGGCCACCAACGGCAGTCCTTCTGCCTTGT...AGTGGGCCTCCTTAGGGAGACAGGTGACCCTGGGTGCCACCCCTGCCCCGTGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
3UTR-3UTR CCA 90 bp TGCCTGTTGTCTGACCTGCTCTCTGGGCACTGGCACGGCCCCTTGCTGGCTGGTAAGGACTGCCGTTGGTaGCCTGGGGGATGCGAGGGG +
Preference number: 2 (lower is better)
Translates to: CLLSDLLSGHWHGPLLAGKDCRW*PGGCEG
Trigger: CCCCTCGCATCCCCCAGGCCACCAACGGCAGTCCTT...ACCAGCCAGCAAGGGGCCGTGCCAGTGCCCAGAGAGCAGGTCAGACAACAGGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
3UTR-3UTR CCA 90 bp CTTGGGTGGGCCAGGCCCTGCTTCAGGAGGTGGCGGGCCACTCCGGAGACTGATGCAGCCCCACCCCAATaGTTGTCGGACTCAGCTGTG +
Preference number: 2 (lower is better)
Translates to: LGWARPCFRRWRATPETDAAPPQ*LSDSAV
Trigger: CACAGCTGAGTCCGACAACCATTGGGGTGGGGCTGC...ATCAGTCTCCGGAGTGGCCCGCCACCTCCTGAAGCAGGGCCTGGCCCACCCAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
3UTR-3UTR TCA 90 bp CTTGGGTGGGCCAGGCCCTGCTTCAGGAGGTGGCGGGCCACTCCGGAGACTGATAGGAGGAGGAGAAAGTaGTGCCTGTGGCCAGGAAGG +
Preference number: 2 (lower is better)
Translates to: LGWARPCFRRWRATPETDRRRRK*CLWPGR
Trigger: CCTTCCTGGCCACAGGCATCACTTTCTCCTCCTCCT...ATCAGTCTCCGGAGTGGCCCGCCACCTCCTGAAGCAGGGCCTGGCCCACCCAAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
3UTR-3UTR TCA 90 bp TGCCTGTTGTCTGACCTGCTCTCTGGGCACTGGCACGGCCCCTTGCTGGCTGGTGAGGCTCCCAGGGCCTaGGGTCACCTCTTCAGCTGT +
Preference number: 2 (lower is better)
Translates to: CLLSDLLSGHWHGPLLAGEAPRA*GHLFSC
Trigger: ACAGCTGAAGAGGTGACCTCAGGCCCTGGGAGCCTC...ACCAGCCAGCAAGGGGCCGTGCCAGTGCCCAGAGAGCAGGTCAGACAACAGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
3UTR-3UTR GCA 90 bp ACAGCATCTTGGCCCTCACAGCTGTGGCAGTGCCTCTGCGGGCCATGGTCCCAGGCCCCTCCAGGGAGATaGTCTCGGCTGCCTTGCTAC +
Preference number: 2 (lower is better)
Translates to: TASWPSQLWQCLCGPWSQAPPGR*SRLPCY
Trigger: GTAGCAAGGCAGCCGAGAGCATCTCCCTGGAGGGGC...CTGGGACCATGGCCCGCAGAGGCACTGCCACAGCTGTGAGGGCCAAGATGCTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
3UTR-3UTR GCA 90 bp ACCCTCCAAGGAAAGAGGCCGCCGCTCCTTCCCCACCAGCCCAGTGTGGCCAGACTGCCGCATGGAGCCTaGCTTTCCAAGGCACTGTCG +
Preference number: 2 (lower is better)
Translates to: TLQGKRPPLLPHQPSVARLPHGA*LSKALS
Trigger: CGACAGTGCCTTGGAAAGGCAGGCTCCATGCGGCAG...TCTGGCCACACTGGGCTGGTGGGGAAGGAGCGGCGGCCTCTTTCCTTGGAGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
3UTR-3UTR CCA 90 bp TGCCTGTTGTCTGACCTGCTCTCTGGGCACTGGCACGGCCCCTTGCTGGCTGGTCAGAAGGACTGCCGTTaGTGGCCTGGGGGATGCGAG +
Preference number: 2 (lower is better)
Translates to: CLLSDLLSGHWHGPLLAGQKDCR*WPGGCE
Trigger: CTCGCATCCCCCAGGCCACCAACGGCAGTCCTTCTG...ACCAGCCAGCAAGGGGCCGTGCCAGTGCCCAGAGAGCAGGTCAGACAACAGGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
3UTR-3UTR CCA 90 bp GTGGGCCCCTCCAGGGAGATGCTCTCGGCTGCCTTGCTACCCAGGGGTCGGCTCCAGGGACCTGGTCTATaGCCTATGCCATGGACAAGG +
Preference number: 2 (lower is better)
Translates to: VGPSREMLSAALLPRGRLQGPGL*PMPWTR
Trigger: CCTTGTCCATGGCATAGGCCATAGACCAGGTCCCTG...GAGCCGACCCCTGGGTAGCAAGGCAGCCGAGAGCATCTCCCTGGAGGGGCCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
3UTR-3UTR CCA 90 bp GCTGGCTGGTCTGAAGACCCCCAGTGCTTCTCTCCCCAATGCTGTCACTGGTCCGTGGTCCCCCGTGCCTaGCTCGGGGAGGATCCTCAG +
Preference number: 2 (lower is better)
Translates to: AGWSEDPQCFSPQCCHWSVVPRA*LGEDPQ
Trigger: CTGAGGATCCTCCCCGAGCCAGGCACGGGGGACCAC...GGACCAGTGACAGCATTGGGGAGAGAAGCACTGGGGGTCTTCAGACCAGCCAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
3UTR-3UTR TCA 90 bp TCTCTCCCCAATGCTGTCACTGGTCCAGGCAGGAGCCCGAGGTTCAGGCCCTGCGCCTTCAGCAACCACTaGGAACACCCGGGGCACACA +
Preference number: 2 (lower is better)
Translates to: SLPNAVTGPGRSPRFRPCAFSNH*EHPGHT
Trigger: TGTGTGCCCCGGGTGTTCTCAGTGGTTGCTGAAGGC...GCAGGGCCTGAACCTCGGGCTCCTGCCTGGACCAGTGACAGCATTGGGGAGAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
3UTR-3UTR GCA 90 bp AGGCTTCAGACCTCTCATCTGTCAATGGGCCAGAGTGATGCCTCAGGCACCGCTCCCCAGCAGTTGGGCTaGCCAGCAGGGCCACCAGGC +
Preference number: 2 (lower is better)
Translates to: RLQTSHLSMGQSDASGTAPQQLG*PAGPPG
Trigger: GCCTGGTGGCCCTGCTGGGCAGCCCAACTGCTGGGG...AGCGGTGCCTGAGGCATCACTCTGGCCCATTGACAGATGAGAGGTCTGAAGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
3UTR-3UTR GCA 90 bp GCCCTGTGGTCCCCCGTGCCTGGCTCGGGGAGGATCCTCAGGAATCAGGGACCCAGACAATCCTGTTGCTaGCGCATGGAGCCTGCCTTT +
Preference number: 2 (lower is better)
Translates to: ALWSPVPGSGRILRNQGPRQSCC*RMEPAF
Trigger: AAAGGCAGGCTCCATGCGGCAGCAACAGGATTGTCT...GGGTCCCTGATTCCTGAGGATCCTCCCCGAGCCAGGCACGGGGGACCACAGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
3UTR-3UTR GCA 90 bp GCTGGCTGGTCTGAAGACCCCCAGTGCTTCTCTCCCCAATGCTGTCACTGGTCCCCGAGGTTCAGGCCCTaGCTCTGGACAGAGGGGCCT +
Preference number: 2 (lower is better)
Translates to: AGWSEDPQCFSPQCCHWSPRFRP*LWTEGP
Trigger: AGGCCCCTCTGTCCAGAGGCAGGGCCTGAACCTCGG...GGACCAGTGACAGCATTGGGGAGAGAAGCACTGGGGGTCTTCAGACCAGCCAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
3UTR-3UTR CCA 90 bp TGCCTGTTGTCTGACCTGCTCTCTGGGCACTGGCACGGCCCCTTGCTGGCTGGTCGCACGGGTTTTGGATaGGGGGACAGCATCTTGGCC +
Preference number: 2 (lower is better)
Translates to: CLLSDLLSGHWHGPLLAGRTGFG*GDSILA
Trigger: GGCCAAGATGCTGTCCCCCCATCCAAAACCCGTGCG...ACCAGCCAGCAAGGGGCCGTGCCAGTGCCCAGAGAGCAGGTCAGACAACAGGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
3UTR-3UTR CCA 90 bp GCCCTGTGGTCCCCCGTGCCTGGCTCGGGGAGGATCCTCAGGAATCAGGGACCCCCTCTCAGAACCCCATaGCAACACGACAAGGACAAG +
Preference number: 2 (lower is better)
Translates to: ALWSPVPGSGRILRNQGPPLRTP*QHDKDK
Trigger: CTTGTCCTTGTCGTGTTGCCATGGGGTTCTGAGAGG...GGGTCCCTGATTCCTGAGGATCCTCCCCGAGCCAGGCACGGGGGACCACAGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
3UTR CAA 90 bp AGGTGGCGGGCCACTCCGGAGACTGATGCAGCCCCACCCCAATGGTaGTCGGACTCAGCTGTGTCTGAGGTCTGTGAACTCCCAGCCTCT +
Preference number: 2 (lower is better)
Translates to: RWRATPETDAAPPQW*SDSAVSEVCELPAS
Trigger: AGAGGCTGGGAGTTCACAGACCTCAGACACAGCTGAGTCCGACAACCATTGGGGTGGGGCTGCATCAGTCTCCGGAGTGGCCCGCCACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
3UTR-3UTR TCA 90 bp ACCCTCCAAGGAAAGAGGCCGCCGCTCCTTCCCCACCAGCCCAGTGTGGCCAGATGCTGCTGCCTCATCTaGGTAGGTGTAAGAGGGGAG +
Preference number: 2 (lower is better)
Translates to: TLQGKRPPLLPHQPSVARCCCLI*VGVRGE
Trigger: CTCCCCTCTTACACCTACTCAGATGAGGCAGCAGCA...TCTGGCCACACTGGGCTGGTGGGGAAGGAGCGGCGGCCTCTTTCCTTGGAGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
3UTR-3UTR TCA 90 bp CCCTTTGTCCTGCCTGGGGCTCTTGCTGGAGCCACGTGCCTAGGGTACAGGGCACCTGCCTCAGCCTCCTaGGTACCTGGGATTATAGGC +
Preference number: 2 (lower is better)
Translates to: PFVLPGALAGATCLGYRAPASAS*VPGIIG
Trigger: GCCTATAATCCCAGGTACTCAGGAGGCTGAGGCAGG...TGCCCTGTACCCTAGGCACGTGGCTCCAGCAAGAGCCCCAGGCAGGACAAAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
3UTR-3UTR GCA 90 bp CCCCGCCGCGAGATGGGTCTGCTGCTGCCTCATCTGAGTAGGTGTAAGAGGGGAACAAGGCAGAAGGACTaGCGTTGGTGGCCTGGGGGA +
Preference number: 2 (lower is better)
Translates to: PRREMGLLLPHLSRCKRGTRQKD*RWWPGG
Trigger: TCCCCCAGGCCACCAACGGCAGTCCTTCTGCCTTGT...TCCCCTCTTACACCTACTCAGATGAGGCAGCAGCAGACCCATCTCGCGGCGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
3UTR-3UTR GCA 90 bp GCTGGCTGGTCTGAAGACCCCCAGTGCTTCTCTCCCCAATGCTGTCACTGGTCCTCACAGCTGTGGCAGTaGCTCTGCGGGCCATGGTCC +
Preference number: 2 (lower is better)
Translates to: AGWSEDPQCFSPQCCHWSSQLWQ*LCGPWS
Trigger: GGACCATGGCCCGCAGAGGCACTGCCACAGCTGTGA...GGACCAGTGACAGCATTGGGGAGAGAAGCACTGGGGGTCTTCAGACCAGCCAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
3UTR-3UTR GCA 90 bp TCTCTCCCCAATGCTGTCACTGGTCCAGGCAGGAGCCCGAGGTTCAGGCCCTGCGCCCTCAACACTCACTaGAGTGGCGCACGGGTTTTG +
Preference number: 2 (lower is better)
Translates to: SLPNAVTGPGRSPRFRPCALNTH*SGARVL
Trigger: CAAAACCCGTGCGCCACTGCAGTGAGTGTTGAGGGC...GCAGGGCCTGAACCTCGGGCTCCTGCCTGGACCAGTGACAGCATTGGGGAGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
3UTR-3UTR GCA 90 bp GAAACCCAGGGCCGGACAGGAGGCGAGGAGGGTGAGTGGGGACATGGCAGGGCTGGCCTCTGTCCCAGCTaGCTTAAGAGGCTCTTTCAA +
Preference number: 2 (lower is better)
Translates to: ETQGRTGGEEGEWGHGRAGLCPS*LKRLFQ
Trigger: TTGAAAGAGCCTCTTAAGGCAGCTGGGACAGAGGCC...AGCCCTGCCATGTCCCCACTCACCCTCCTCGCCTCCTGTCCGGCCCTGGGTTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
3UTR-3UTR GCA 90 bp CACACGGGGCAGGGGTGGCACCCAGGGTCACCTGTCTCCCTAAGGAGGCCCACTGGCCTCTGTCCCAGCTaGCTTAAGAGGCTCTTTCAA +
Preference number: 2 (lower is better)
Translates to: HTGQGWHPGSPVSLRRPTGLCPS*LKRLFQ
Trigger: TTGAAAGAGCCTCTTAAGGCAGCTGGGACAGAGGCC...AGTGGGCCTCCTTAGGGAGACAGGTGACCCTGGGTGCCACCCCTGCCCCGTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
3UTR-3UTR GCA 90 bp TGCCTGTTGTCTGACCTGCTCTCTGGGCACTGGCACGGCCCCTTGCTGGCTGGTGGCTGTTTCTGCAGCTaGTGCCTGCTCCCTTTGTCC +
Preference number: 2 (lower is better)
Translates to: CLLSDLLSGHWHGPLLAGGCFCS*CLLPLS
Trigger: GGACAAAGGGAGCAGGCAGCAGCTGCAGAAACAGCC...ACCAGCCAGCAAGGGGCCGTGCCAGTGCCCAGAGAGCAGGTCAGACAACAGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
3UTR-3UTR TCA 90 bp ATAGTTGACCCGCACGTTGGGCAGAGGGGGCACGTACGGGGCTGGGATAGGCCCTCTTTGCAGAACAAGTaGGCATCTGCGCACTGCGTC +
Preference number: 2 (lower is better)
Translates to: IVDPHVGQRGHVRGWDRPSLQNK*ASAHCV
Trigger: GACGCAGTGCGCAGATGCTCACTTGTTCTGCAAAGA...GGGCCTATCCCAGCCCCGTACGTGCCCCCTCTGCCCAACGTGCGGGTCAACTAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389900.8
3UTR-3UTR TCA 90 bp CCAGGAAGGCTTCAGACCTCTCATCTGTCAATGGGCCAGAGTGATGCCTCAGGCGGAGAGGCCCAGGTGTaGGCAGCAGGGACCTGGTCT +
Preference number: 2 (lower is better)
Translates to: PGRLQTSHLSMGQSDASGGEAQV*AAGTWS
Trigger: AGACCAGGTCCCTGCTGCTCACACCTGGGCCTCTCC...GCCTGAGGCATCACTCTGGCCCATTGACAGATGAGAGGTCTGAAGCCTTCCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
3UTR-3UTR TCA 90 bp TGCCTGTTGTCTGACCTGCTCTCTGGGCACTGGCACGGCCCCTTGCTGGCTGGTTGCTGCTGCCTCATCTaGGTAGGTGTAAGAGGGGAG +
Preference number: 2 (lower is better)
Translates to: CLLSDLLSGHWHGPLLAGCCCLI*VGVRGE
Trigger: CTCCCCTCTTACACCTACTCAGATGAGGCAGCAGCA...ACCAGCCAGCAAGGGGCCGTGCCAGTGCCCAGAGAGCAGGTCAGACAACAGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
3UTR-3UTR TCA 90 bp CACACGGGGCAGGGGTGGCACCCAGGGTCACCTGTCTCCCTAAGGAGGCCCACTAAGGATTTCTCAGCCTaGCTTTCCAGAGACCGAGGA +
Preference number: 2 (lower is better)
Translates to: HTGQGWHPGSPVSLRRPTKDFSA*LSRDRG
Trigger: TCCTCGGTCTCTGGAAAGTCAGGCTGAGAAATCCTT...AGTGGGCCTCCTTAGGGAGACAGGTGACCCTGGGTGCCACCCCTGCCCCGTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
3UTR-3UTR TCA 90 bp CCCTTTGTCCTGCCTGGGGCTCTTGCTGGAGCCACGTGCCTAGGGTACAGGGCATCACCTCTTCAGCTGTaGTGTCTACAGCCGCCCTCT +
Preference number: 2 (lower is better)
Translates to: PFVLPGALAGATCLGYRASPLQL*CLQPPS
Trigger: AGAGGGCGGCTGTAGACATCACAGCTGAAGAGGTGA...TGCCCTGTACCCTAGGCACGTGGCTCCAGCAAGAGCCCCAGGCAGGACAAAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
3UTR-3UTR TCA 90 bp TCTCTCCCCAATGCTGTCACTGGTCCAGGCAGGAGCCCGAGGTTCAGGCCCTGCTCACCTCTTCAGCTGTaGTGTCTACAGCCGCCCTCT +
Preference number: 2 (lower is better)
Translates to: SLPNAVTGPGRSPRFRPCSPLQL*CLQPPS
Trigger: AGAGGGCGGCTGTAGACATCACAGCTGAAGAGGTGA...GCAGGGCCTGAACCTCGGGCTCCTGCCTGGACCAGTGACAGCATTGGGGAGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
3UTR-3UTR GCA 90 bp TGCCTGTTGTCTGACCTGCTCTCTGGGCACTGGCACGGCCCCTTGCTGGCTGGTAAACGGGCTTTGTGCTaGTCAATGGGGATTCGGGGC +
Preference number: 2 (lower is better)
Translates to: CLLSDLLSGHWHGPLLAGKRALC*SMGIRG
Trigger: GCCCCGAATCCCCATTGAGCAGCACAAAGCCCGTTT...ACCAGCCAGCAAGGGGCCGTGCCAGTGCCCAGAGAGCAGGTCAGACAACAGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
3UTR-3UTR GCA 90 bp ACCGAGGATGAGAAAGTTAGGCGGCAACAGAACAAAACCCCCGCCGCGAGATGGTGCTCTCGGCTGCCTTaGTACCCAGGGGTCGGCTCC +
Preference number: 2 (lower is better)
Translates to: TEDEKVRRQQNKTPAARWCSRLP*YPGVGS
Trigger: GGAGCCGACCCCTGGGTAGCAAGGCAGCCGAGAGCA...CCATCTCGCGGCGGGGGTTTTGTTCTGTTGCCGCCTAACTTTCTCATCCTCGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
3UTR-3UTR GCA 90 bp ATGCAGCCCCACCCCAATGGTTGTCGGACTCAGCTGTGTCTGAGGTCTGTGAACCCCCACCCTGAGCAATaGTTCCCAGGCCCGCAGGTG +
Preference number: 2 (lower is better)
Translates to: MQPHPNGCRTQLCLRSVNPHPEQ*FPGPQV
Trigger: CACCTGCGGGCCTGGGAAGCATTGCTCAGGGTGGGG...GTTCACAGACCTCAGACACAGCTGAGTCCGACAACCATTGGGGTGGGGCTGCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
3UTR-3UTR GCA 90 bp CCAGGAAGGCTTCAGACCTCTCATCTGTCAATGGGCCAGAGTGATGCCTCAGGCCCCCACCCTGAGCAATaGTTCCCAGGCCCGCAGGTG +
Preference number: 2 (lower is better)
Translates to: PGRLQTSHLSMGQSDASGPHPEQ*FPGPQV
Trigger: CACCTGCGGGCCTGGGAAGCATTGCTCAGGGTGGGG...GCCTGAGGCATCACTCTGGCCCATTGACAGATGAGAGGTCTGAAGCCTTCCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
3UTR-3UTR GCA 90 bp TCTCTCCCCAATGCTGTCACTGGTCCAGGCAGGAGCCCGAGGTTCAGGCCCTGCTGTTTCTGCAGCTGCTaGCTGCTCCCTTTGTCCTGC +
Preference number: 2 (lower is better)
Translates to: SLPNAVTGPGRSPRFRPCCFCSC*LLPLSC
Trigger: GCAGGACAAAGGGAGCAGGCAGCAGCTGCAGAAACA...GCAGGGCCTGAACCTCGGGCTCCTGCCTGGACCAGTGACAGCATTGGGGAGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
3UTR-3UTR CCA 90 bp TCTCTCCCCAATGCTGTCACTGGTCCAGGCAGGAGCCCGAGGTTCAGGCCCTGCTACAGACACCAGCCTTaGGGGAGGGTTCTCCATCCA +
Preference number: 2 (lower is better)
Translates to: SLPNAVTGPGRSPRFRPCYRHQP*GRVLHP
Trigger: TGGATGGAGAACCCTCCCCCAAGGCTGGTGTCTGTA...GCAGGGCCTGAACCTCGGGCTCCTGCCTGGACCAGTGACAGCATTGGGGAGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
3UTR-3UTR CCA 90 bp AGGCTTCAGACCTCTCATCTGTCAATGGGCCAGAGTGATGCCTCAGGCACCGCTACCCCCGCCGCGAGATaGGTCTGCTGCTGCCTCATC +
Preference number: 2 (lower is better)
Translates to: RLQTSHLSMGQSDASGTATPAAR*VCCCLI
Trigger: GATGAGGCAGCAGCAGACCCATCTCGCGGCGGGGGT...AGCGGTGCCTGAGGCATCACTCTGGCCCATTGACAGATGAGAGGTCTGAAGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
3UTR-3UTR CCA 90 bp GTGATGCCTGTGGCCAGGAAGGCTTCAGACCTCTCATCTGTCAATGGGCCAGAGACCCCCGCCGCGAGATaGGTCTGCTGCTGCCTCATC +
Preference number: 2 (lower is better)
Translates to: VMPVARKASDLSSVNGPETPAAR*VCCCLI
Trigger: GATGAGGCAGCAGCAGACCCATCTCGCGGCGGGGGT...CTCTGGCCCATTGACAGATGAGAGGTCTGAAGCCTTCCTGGCCACAGGCATCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
3UTR-3UTR CCA 90 bp CCCTTTGTCCTGCCTGGGGCTCTTGCTGGAGCCACGTGCCTAGGGTACAGGGCATCACATGGGGGATACTaGACAGCACCCTCTACCTGC +
Preference number: 2 (lower is better)
Translates to: PFVLPGALAGATCLGYRASHGGY*TAPSTC
Trigger: GCAGGTAGAGGGTGCTGTCCAGTATCCCCCATGTGA...TGCCCTGTACCCTAGGCACGTGGCTCCAGCAAGAGCCCCAGGCAGGACAAAGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
3UTR-3UTR CCA 90 bp ACCCTCCAAGGAAAGAGGCCGCCGCTCCTTCCCCACCAGCCCAGTGTGGCCAGACAAATGACCCACCCCTaGGGTTTGGCCTTAGGAGAA +
Preference number: 2 (lower is better)
Translates to: TLQGKRPPLLPHQPSVARQMTHP*GLALGE
Trigger: TTCTCCTAAGGCCAAACCCCAGGGGTGGGTCATTTG...TCTGGCCACACTGGGCTGGTGGGGAAGGAGCGGCGGCCTCTTTCCTTGGAGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
3UTR-3UTR TCA 90 bp ATAGTTGACCCGCACGTTGGGCAGAGGGGGCACGTACGGGGCTGGGATAGGCCCGGGGTCCAATGCGTTTaGAGGTGTTCTCTCCATTCT +
Preference number: 2 (lower is better)
Translates to: IVDPHVGQRGHVRGWDRPGVQCV*RCSLHS
Trigger: AGAATGGAGAGAACACCTTCAAACGCATTGGACCCC...GGGCCTATCCCAGCCCCGTACGTGCCCCCTCTGCCCAACGTGCGGGTCAACTAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000389900.8
3UTR-3UTR TCA 90 bp CCCTTTGTCCTGCCTGGGGCTCTTGCTGGAGCCACGTGCCTAGGGTACAGGGCAGAGCTGATGCTCAGCTaGCTCCATGAGAAGGGAAGT +
Preference number: 2 (lower is better)
Translates to: PFVLPGALAGATCLGYRAELMLS*LHEKGS
Trigger: ACTTCCCTTCTCATGGAGTCAGCTGAGCATCAGCTC...TGCCCTGTACCCTAGGCACGTGGCTCCAGCAAGAGCCCCAGGCAGGACAAAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
3UTR-3UTR GCA 90 bp ATGCAGCCCCACCCCAATGGTTGTCGGACTCAGCTGTGTCTGAGGTCTGTGAACGCCCCTCCAGGGAGATaGTCTCGGCTGCCTTGCTAC +
Preference number: 2 (lower is better)
Translates to: MQPHPNGCRTQLCLRSVNAPPGR*SRLPCY
Trigger: GTAGCAAGGCAGCCGAGAGCATCTCCCTGGAGGGGC...GTTCACAGACCTCAGACACAGCTGAGTCCGACAACCATTGGGGTGGGGCTGCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
3UTR-3UTR CCA 90 bp ACAGCATCTTGGCCCTCACAGCTGTGGCAGTGCCTCTGCGGGCCATGGTCCCAGCTATGGCCTATGCCATaGACAAGGCAGAAGGACTGC +
Preference number: 2 (lower is better)
Translates to: TASWPSQLWQCLCGPWSQLWPMP*TRQKDC
Trigger: GCAGTCCTTCTGCCTTGTCCATGGCATAGGCCATAG...CTGGGACCATGGCCCGCAGAGGCACTGCCACAGCTGTGAGGGCCAAGATGCTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
3UTR-3UTR CCA 90 bp GATCCTCCCTGGGGAAGCACAGGGAGCATATTTAAGGTACCGAAGACAATCCTGAGCCCCCTCTGCCCTTaGCCCAACCGTGGGCCCCTC +
Preference number: 2 (lower is better)
Translates to: DPPWGSTGSIFKVPKTILSPLCP*PNRGPL
Trigger: GAGGGGCCCACGGTTGGGCCAAGGGCAGAGGGGGCT...CAGGATTGTCTTCGGTACCTTAAATATGCTCCCTGTGCTTCCCCAGGGAGGATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
3UTR-3UTR TCA 90 bp TCTCCATCCACACTCCTACCCCAAACGGGCTTTGTGCTGCTCAATGGGGATTCGTACAGGACGGGCACCTaGCAAGCTCGTCGGCGTAGG +
Preference number: 2 (lower is better)
Translates to: SPSTLLPQTGFVLLNGDSYRTGT*QARRRR
Trigger: CCTACGCCGACGAGCTTGTCAGGTGCCCGTCCTGTA...CGAATCCCCATTGAGCAGCACAAAGCCCGTTTGGGGTAGGAGTGTGGATGGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389900.8
3UTR-3UTR TCA 90 bp ATGCAGCCCCACCCCAATGGTTGTCGGACTCAGCTGTGTCTGAGGTCTGTGAACGGGACATGGCAGGGCTaGGCTGATGCTCAGCTGACT +
Preference number: 2 (lower is better)
Translates to: MQPHPNGCRTQLCLRSVNGTWQG*ADAQLT
Trigger: AGTCAGCTGAGCATCAGCTCAGCCCTGCCATGTCCC...GTTCACAGACCTCAGACACAGCTGAGTCCGACAACCATTGGGGTGGGGCTGCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
3UTR-3UTR CCA 90 bp TCTCCATCCACACTCCTACCCCAAACGGGCTTTGTGCTGCTCAATGGGGATTCGGGGGGCCAAAGTGCATaGGCAGGTTGTGCTCCAGGG +
Preference number: 2 (lower is better)
Translates to: SPSTLLPQTGFVLLNGDSGGQSA*AGCAPG
Trigger: CCCTGGAGCACAACCTGCCCATGCACTTTGGCCCCC...CGAATCCCCATTGAGCAGCACAAAGCCCGTTTGGGGTAGGAGTGTGGATGGAGA
59% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000389900.8
3UTR-3UTR CCA 90 bp GCCCTGTGGTCCCCCGTGCCTGGCTCGGGGAGGATCCTCAGGAATCAGGGACCCCCGAACTCCACCATTTaGGACGTCTTTATTATGGAT +
Preference number: 2 (lower is better)
Translates to: ALWSPVPGSGRILRNQGPPNSTI*DVFIMD
Trigger: ATCCATAATAAAGACGTCCCAAATGGTGGAGTTCGG...GGGTCCCTGATTCCTGAGGATCCTCCCCGAGCCAGGCACGGGGGACCACAGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
3UTR-3UTR CCA 90 bp TCTCCATCCACACTCCTACCCCAAACGGGCTTTGTGCTGCTCAATGGGGATTCGCAGAAGGACTGCCGTTaGTGGCCTGGGGGATGCGAG +
Preference number: 2 (lower is better)
Translates to: SPSTLLPQTGFVLLNGDSQKDCR*WPGGCE
Trigger: CTCGCATCCCCCAGGCCACCAACGGCAGTCCTTCTG...CGAATCCCCATTGAGCAGCACAAAGCCCGTTTGGGGTAGGAGTGTGGATGGAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
3UTR-3UTR CCA 90 bp CCCCGCCGCGAGATGGGTCTGCTGCTGCCTCATCTGAGTAGGTGTAAGAGGGGACTATGGCCTATGCCATaGACAAGGCAGAAGGACTGC +
Preference number: 2 (lower is better)
Translates to: PRREMGLLLPHLSRCKRGLWPMP*TRQKDC
Trigger: GCAGTCCTTCTGCCTTGTCCATGGCATAGGCCATAG...TCCCCTCTTACACCTACTCAGATGAGGCAGCAGCAGACCCATCTCGCGGCGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
3UTR-3UTR CCA 90 bp GATCCTCCCTGGGGAAGCACAGGGAGCATATTTAAGGTACCGAAGACAATCCTGCCCTTGGCCCAACCGTaGGCCCCTCCAGGGAGATGC +
Preference number: 2 (lower is better)
Translates to: DPPWGSTGSIFKVPKTILPLAQP*APPGRC
Trigger: GCATCTCCCTGGAGGGGCCCACGGTTGGGCCAAGGG...CAGGATTGTCTTCGGTACCTTAAATATGCTCCCTGTGCTTCCCCAGGGAGGATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
3UTR-3UTR CCA 90 bp AGGCTTCAGACCTCTCATCTGTCAATGGGCCAGAGTGATGCCTCAGGCACCGCTGCTCATCACCCAGGGTaGCAGAAACGTCTCCCCCAG +
Preference number: 2 (lower is better)
Translates to: RLQTSHLSMGQSDASGTAAHHPG*QKRLPQ
Trigger: CTGGGGGAGACGTTTCTGCCACCCTGGGTGATGAGC...AGCGGTGCCTGAGGCATCACTCTGGCCCATTGACAGATGAGAGGTCTGAAGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
3UTR-3UTR CCA 90 bp ATGCAGCCCCACCCCAATGGTTGTCGGACTCAGCTGTGTCTGAGGTCTGTGAACGCTCATCACCCAGGGTaGCAGAAACGTCTCCCCCAG +
Preference number: 2 (lower is better)
Translates to: MQPHPNGCRTQLCLRSVNAHHPG*QKRLPQ
Trigger: CTGGGGGAGACGTTTCTGCCACCCTGGGTGATGAGC...GTTCACAGACCTCAGACACAGCTGAGTCCGACAACCATTGGGGTGGGGCTGCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
3UTR-3UTR TCA 90 bp GGGTTCTCCATCCACACTCCTACCCCAAACGGGCTTTGTGCTGCTCAATGGGGACCAGAGAGAGCATCTTaGACACTCCTGGCAAGGGGC +
Preference number: 2 (lower is better)
Translates to: GFSIHTPTPNGLCAAQWGPERAS*TLLARG
Trigger: GCCCCTTGCCAGGAGTGTTCAAGATGCTCTCTCTGG...TCCCCATTGAGCAGCACAAAGCCCGTTTGGGGTAGGAGTGTGGATGGAGAACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000389900.8
3UTR-3UTR TCA 90 bp GGGTTCTCCATCCACACTCCTACCCCAAACGGGCTTTGTGCTGCTCAATGGGGAGACCGAAGTCATAGTTaGCCCGCACGTTGGGCAGAG +
Preference number: 2 (lower is better)
Translates to: GFSIHTPTPNGLCAAQWGDRSHS*PARWAE
Trigger: CTCTGCCCAACGTGCGGGTCAACTATGACTTCGGTC...TCCCCATTGAGCAGCACAAAGCCCGTTTGGGGTAGGAGTGTGGATGGAGAACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389900.8
3UTR-3UTR GCA 90 bp CCTTCAGATTTGATGAGGCCAGTCCCACACTTGTGGCATTTTCTAATGCGGGCACTCGTCGGCGTAGGCTaGCGCAACCTCCTCCTCGGC +
Preference number: 2 (lower is better)
Translates to: PSDLMRPVPHLWHFLMRALVGVG*RNLLLG
Trigger: GCCGAGGAGGAGGTTGCGGCAGCCTACGCCGACGAG...TGCCCGCATTAGAAAATGCCACAAGTGTGGGACTGGCCTCATCAAATCTGAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389900.8
3UTR-3UTR GCA 90 bp CCCTTTGTCCTGCCTGGGGCTCTTGCTGGAGCCACGTGCCTAGGGTACAGGGCACAAGCTGACTTAGGATaGAATGGTACAGACACCAGC +
Preference number: 2 (lower is better)
Translates to: PFVLPGALAGATCLGYRAQADLG*NGTDTS
Trigger: GCTGGTGTCTGTACCATTGCATCCTAAGTCAGCTTG...TGCCCTGTACCCTAGGCACGTGGCTCCAGCAAGAGCCCCAGGCAGGACAAAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
3UTR-3UTR CCA 90 bp TGCCTGTTGTCTGACCTGCTCTCTGGGCACTGGCACGGCCCCTTGCTGGCTGGTAAGAGGCTCTTTCAATaGGCCAGCTTCAGAACCATC +
Preference number: 2 (lower is better)
Translates to: CLLSDLLSGHWHGPLLAGKRLFQ*ASFRTI
Trigger: GATGGTTCTGAAGCTGGCCCATTGAAAGAGCCTCTT...ACCAGCCAGCAAGGGGCCGTGCCAGTGCCCAGAGAGCAGGTCAGACAACAGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
3UTR-3UTR TCA 90 bp TTCAGGCTAGTAGCAAAGTTCAGGCAGTCCAACAGGTATGGGCGCCAGCAAGGAGGGACATGGCAGGGCTaGGCTGATGCTCAGCTGACT +
Preference number: 2 (lower is better)
Translates to: FRLVAKFRQSNRYGRQQGGTWQG*ADAQLT
Trigger: AGTCAGCTGAGCATCAGCTCAGCCCTGCCATGTCCC...TCCTTGCTGGCGCCCATACCTGTTGGACTGCCTGAACTTTGCTACTAGCCTGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
3UTR-3UTR GCA 90 bp TGCACCTTCTCCACAGGCTTCTCCAGCGGGGGTCCAATGCGTTTGAAGGTGTTCGAACAAGTGAGCATCTaGGCACTGCGTCAGCTCCTC +
Preference number: 2 (lower is better)
Translates to: CTFSTGFSSGGPMRLKVFEQVSI*ALRQLL
Trigger: GAGGAGCTGACGCAGTGCGCAGATGCTCACTTGTTC...GAACACCTTCAAACGCATTGGACCCCCGCTGGAGAAGCCTGTGGAGAAGGTGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389900.8
3UTR-3UTR GCA 90 bp TGCACCTTCTCCACAGGCTTCTCCAGCGGGGGTCCAATGCGTTTGAAGGTGTTCTTGGGAACGAACACGTaGAGCTGCCTTCCATGCAGC +
Preference number: 2 (lower is better)
Translates to: CTFSTGFSSGGPMRLKVFLGTNT*SCLPCS
Trigger: GCTGCATGGAAGGCAGCTGCACGTGTTCGTTCCCAA...GAACACCTTCAAACGCATTGGACCCCCGCTGGAGAAGCCTGTGGAGAAGGTGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389900.8
3UTR-3UTR CCA 90 bp GGGTTCTCCATCCACACTCCTACCCCAAACGGGCTTTGTGCTGCTCAATGGGGACCTTCTCCAGCTCACTaGTTGGGAACGAACACGTGC +
Preference number: 2 (lower is better)
Translates to: GFSIHTPTPNGLCAAQWGPSPAH*LGTNTC
Trigger: GCACGTGTTCGTTCCCAACCAGTGAGCTGGAGAAGG...TCCCCATTGAGCAGCACAAAGCCCGTTTGGGGTAGGAGTGTGGATGGAGAACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389900.8
3UTR-3UTR CCA 90 bp AGGCTTCAGACCTCTCATCTGTCAATGGGCCAGAGTGATGCCTCAGGCACCGCTCAACACTCACTGCAGTaGCGCACGGGTTTTGGATGG +
Preference number: 2 (lower is better)
Translates to: RLQTSHLSMGQSDASGTAQHSLQ*RTGFGW
Trigger: CCATCCAAAACCCGTGCGCCACTGCAGTGAGTGTTG...AGCGGTGCCTGAGGCATCACTCTGGCCCATTGACAGATGAGAGGTCTGAAGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
3UTR-3UTR CCA 90 bp TTCAGGCTAGTAGCAAAGTTCAGGCAGTCCAACAGGTATGGGCGCCAGCAAGGACGCAGCGGCCTGGCCTaGGAAAGGATTTCTCAGCCT +
Preference number: 2 (lower is better)
Translates to: FRLVAKFRQSNRYGRQQGRSGLA*ERISQP
Trigger: AGGCTGAGAAATCCTTTCCCAGGCCAGGCCGCTGCG...TCCTTGCTGGCGCCCATACCTGTTGGACTGCCTGAACTTTGCTACTAGCCTGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
3UTR-3UTR TCA 90 bp ATGCAGCCCCACCCCAATGGTTGTCGGACTCAGCTGTGTCTGAGGTCTGTGAACGAGCTGATGCTCAGCTaGCTCCATGAGAAGGGAAGT +
Preference number: 2 (lower is better)
Translates to: MQPHPNGCRTQLCLRSVNELMLS*LHEKGS
Trigger: ACTTCCCTTCTCATGGAGTCAGCTGAGCATCAGCTC...GTTCACAGACCTCAGACACAGCTGAGTCCGACAACCATTGGGGTGGGGCTGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
3UTR-3UTR CCA 90 bp CAGGTTGTGCTCCAGGGGCATGTGGATGGGACCGAAGTCATAGTTGACCCGCACCGTCAGCTCCTCGAATaGAAATTCCCCATAGCAGCA +
Preference number: 2 (lower is better)
Translates to: QVVLQGHVDGTEVIVDPHRQLLE*KFPIAA
Trigger: TGCTGCTATGGGGAATTTCCATTCGAGGAGCTGACG...GTGCGGGTCAACTATGACTTCGGTCCCATCCACATGCCCCTGGAGCACAACCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389900.8
3UTR-3UTR CCA 90 bp GATCCTCCCTGGGGAAGCACAGGGAGCATATTTAAGGTACCGAAGACAATCCTGGCAGCCCCACCCCAATaGTTGTCGGACTCAGCTGTG +
Preference number: 2 (lower is better)
Translates to: DPPWGSTGSIFKVPKTILAAPPQ*LSDSAV
Trigger: CACAGCTGAGTCCGACAACCATTGGGGTGGGGCTGC...CAGGATTGTCTTCGGTACCTTAAATATGCTCCCTGTGCTTCCCCAGGGAGGATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
3UTR CAA 90 bp ATCTGGGCACCACAGCGGCAAGACATGCGGTTGCAGCCTTCAGATTaGATGAGGCCAGTCCCACACTTGTGGCATTTTCTAATGCGGGCA +
Preference number: 2 (lower is better)
Translates to: IWAPQRQDMRLQPSD*MRPVPHLWHFLMRA
Trigger: TGCCCGCATTAGAAAATGCCACAAGTGTGGGACTGGCCTCATCAAATCTGAAGGCTGCAACCGCATGTCTTGCCGCTGTGGTGCCCAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389900.8
3UTR CAA 90 bp AGGGGAGGGGCAGTTCACATCGCAGCTCTCTCCGAACTCCACCATTaGGGACGTCTTTATTATGGATCCGTCCACTCTTCCAGGAGCAGT +
Preference number: 2 (lower is better)
Translates to: RGGAVHIAALSELHH*GRLYYGSVHSSRSS
Trigger: ACTGCTCCTGGAAGAGTGGACGGATCCATAATAAAGACGTCCCAAATGGTGGAGTTCGGAGAGAGCTGCGATGTGAACTGCCCCTCCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
3UTR CAA 90 bp TGGGGAAGCACAGGGAGCATATTTAAGGTACCGAAGACAATCCTGTaGCTGCCGCATGGAGCCTGCCTTTCCAAGGCACTGTCGTTCAGG +
Preference number: 2 (lower is better)
Translates to: WGSTGSIFKVPKTIL*LPHGACLSKALSFR
Trigger: CCTGAACGACAGTGCCTTGGAAAGGCAGGCTCCATGCGGCAGCAACAGGATTGTCTTCGGTACCTTAAATATGCTCCCTGTGCTTCCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
3UTR-3UTR CCA 90 bp GATGAGACACTCTTTGCAGAACAAGTGAGCATCTGCGCACTGCGTCAGCTCCTCCTCTTGTTGCACAGCTaGAAGGAGAGCACGTCGGTC +
Preference number: 2 (lower is better)
Translates to: DETLFAEQVSICALRQLLLLLHS*KESTSV
Trigger: GACCGACGTGCTCTCCTTCCAGCTGTGCAACAAGAG...GAGGAGCTGACGCAGTGCGCAGATGCTCACTTGTTCTGCAAAGAGTGTCTCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389900.8
3UTR-3UTR CCA 90 bp CAGGTTGTGCTCCAGGGGCATGTGGATGGGACCGAAGTCATAGTTGACCCGCACCCAAAGACTGCCTCTTaGGCATATCTGATGAGACAC +
Preference number: 2 (lower is better)
Translates to: QVVLQGHVDGTEVIVDPHPKTAS*AYLMRH
Trigger: GTGTCTCATCAGATATGCCCAAGAGGCAGTCTTTGG...GTGCGGGTCAACTATGACTTCGGTCCCATCCACATGCCCCTGGAGCACAACCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389900.8
3UTR-3UTR CCA 90 bp TGCACCTTCTCCACAGGCTTCTCCAGCGGGGGTCCAATGCGTTTGAAGGTGTTCCCAGTCCCACACTTGTaGCATTTTCTAATGCGGGCA +
Preference number: 2 (lower is better)
Translates to: CTFSTGFSSGGPMRLKVFPVPHL*HFLMRA
Trigger: TGCCCGCATTAGAAAATGCCACAAGTGTGGGACTGG...GAACACCTTCAAACGCATTGGACCCCCGCTGGAGAAGCCTGTGGAGAAGGTGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389900.8
3UTR-3UTR CCA 90 bp GGGTTCTCCATCCACACTCCTACCCCAAACGGGCTTTGTGCTGCTCAATGGGGAAGTACTTATACAGGATaGTCTGGGGGAGCACCTTCT +
Preference number: 2 (lower is better)
Translates to: GFSIHTPTPNGLCAAQWGSTYTG*SGGAPS
Trigger: AGAAGGTGCTCCCCCAGACCATCCTGTATAAGTACT...TCCCCATTGAGCAGCACAAAGCCCGTTTGGGGTAGGAGTGTGGATGGAGAACCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000389900.8
3UTR-3UTR CCA 90 bp ATGCAGCCCCACCCCAATGGTTGTCGGACTCAGCTGTGTCTGAGGTCTGTGAACGGGACGTCTTTATTATaGATCCGTCCACTCTTCCAG +
Preference number: 2 (lower is better)
Translates to: MQPHPNGCRTQLCLRSVNGTSLL*IRPLFQ
Trigger: CTGGAAGAGTGGACGGATCCATAATAAAGACGTCCC...GTTCACAGACCTCAGACACAGCTGAGTCCGACAACCATTGGGGTGGGGCTGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
3UTR-3UTR CCA 90 bp TTCAGGCTAGTAGCAAAGTTCAGGCAGTCCAACAGGTATGGGCGCCAGCAAGGACCTCTCATCTGTCAATaGGCCAGAGTGATGCCTCAG +
Preference number: 2 (lower is better)
Translates to: FRLVAKFRQSNRYGRQQGPLICQ*ARVMPQ
Trigger: CTGAGGCATCACTCTGGCCCATTGACAGATGAGAGG...TCCTTGCTGGCGCCCATACCTGTTGGACTGCCTGAACTTTGCTACTAGCCTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
3UTR-3UTR GCA 90 bp TCTCCATCCACACTCCTACCCCAAACGGGCTTTGTGCTGCTCAATGGGGATTCGGAGTTTTGCTTTTGTTaGTCAGGCTGGAGTGCAGTG +
Preference number: 2 (lower is better)
Translates to: SPSTLLPQTGFVLLNGDSEFCFC*SGWSAV
Trigger: CACTGCACTCCAGCCTGAGCAACAAAAGCAAAACTC...CGAATCCCCATTGAGCAGCACAAAGCCCGTTTGGGGTAGGAGTGTGGATGGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
3UTR-3UTR CCA 90 bp CAGCCTTCAGATTTGATGAGGCCAGTCCCACACTTGTGGCATTTTCTAATGCGGCTCCAGCTCACTGGTTaGGAACGAACACGTGCAGCT +
Preference number: 2 (lower is better)
Translates to: QPSDLMRPVPHLWHFLMRLQLTG*ERTRAA
Trigger: AGCTGCACGTGTTCGTTCCCAACCAGTGAGCTGGAG...CCGCATTAGAAAATGCCACAAGTGTGGGACTGGCCTCATCAAATCTGAAGGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389900.8
3UTR-3UTR CCA 90 bp GTGTCTGAGGTCTGTGAACTCCCAGCCTCTCAGAACCCCATGGCAACACGACAAGGGACGTCTTTATTATaGATCCGTCCACTCTTCCAG +
Preference number: 2 (lower is better)
Translates to: VSEVCELPASQNPMATRQGTSLL*IRPLFQ
Trigger: CTGGAAGAGTGGACGGATCCATAATAAAGACGTCCC...TTGTCGTGTTGCCATGGGGTTCTGAGAGGCTGGGAGTTCACAGACCTCAGACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
3UTR-3UTR TCA 90 bp TCCAGGAGGCCCAAGATCCAGAAATTCACCGTAGTCATCCTCAGAATCATCTTCGCTGAGGAGCTGGGGTaGCCAGCATTGGAATCCTTT +
Preference number: 2 (lower is better)
Translates to: SRRPKIQKFTVVILRIIFAEELG*PALESF
Trigger: AAAGGATTCCAATGCTGGTCACCCCAGCTCCTCAGC...GAAGATGATTCTGAGGATGACTACGGTGAATTTCTGGATCTTGGGCCTCCTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411812.1
3UTR-3UTR TCA 90 bp AGGCCCAAGATCCAGAAATTCACCGTAGTCATCCTCAGAATCATCTTCTGTCAGTCTTCTTCATGCTGCTaGGGAGCTGGGGTGACCAGC +
Preference number: 2 (lower is better)
Translates to: RPKIQKFTVVILRIIFCQSSSCC*GAGVTS
Trigger: GCTGGTCACCCCAGCTCCTCAGCAGCATGAAGAAGA...CTGACAGAAGATGATTCTGAGGATGACTACGGTGAATTTCTGGATCTTGGGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411812.1
3UTR-3UTR CCA 90 bp GGGTTCTCCATCCACACTCCTACCCCAAACGGGCTTTGTGCTGCTCAATGGGGATCTTCAGCCTCCTTCTaGATTTCCTCAATAAGCTTC +
Preference number: 2 (lower is better)
Translates to: GFSIHTPTPNGLCAAQWGSSASF*ISSISF
Trigger: GAAGCTTATTGAGGAAATCCAGAAGGAGGCTGAAGA...TCCCCATTGAGCAGCACAAAGCCCGTTTGGGGTAGGAGTGTGGATGGAGAACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389900.8
3UTR-3UTR CCA 90 bp ATGCAGCCCCACCCCAATGGTTGTCGGACTCAGCTGTGTCTGAGGTCTGTGAACCCGAACTCCACCATTTaGGACGTCTTTATTATGGAT +
Preference number: 2 (lower is better)
Translates to: MQPHPNGCRTQLCLRSVNPNSTI*DVFIMD
Trigger: ATCCATAATAAAGACGTCCCAAATGGTGGAGTTCGG...GTTCACAGACCTCAGACACAGCTGAGTCCGACAACCATTGGGGTGGGGCTGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
3UTR-3UTR GCA 90 bp CAGGTTGTGCTCCAGGGGCATGTGGATGGGACCGAAGTCATAGTTGACCCGCACAGCAAAAAGTCTTCATaGTCTGCCATCTCTTTGATT +
Preference number: 2 (lower is better)
Translates to: QVVLQGHVDGTEVIVDPHSKKSS*SAISLI
Trigger: AATCAAAGAGATGGCAGAGCATGAAGACTTTTTGCT...GTGCGGGTCAACTATGACTTCGGTCCCATCCACATGCCCCTGGAGCACAACCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389900.8
3UTR-3UTR CCA 90 bp ACAAAAGTCCCAGTTACATATGATACAGGCTTTTTACACACAGTAGTTGAAACGGTCTCCCCCAGCAGTTaGGCTGCCCAGCAGGGCCAC +
Preference number: 2 (lower is better)
Translates to: TKVPVTYDTGFLHTVVETVSPSS*AAQQGH
Trigger: GTGGCCCTGCTGGGCAGCCCAACTGCTGGGGGAGAC...CGTTTCAACTACTGTGTGTAAAAAGCCTGTATCATATGTAACTGGGACTTTTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
3UTR CAA 90 bp ATGCTCTGCCATCTCTTTGATTTTCTGCTCATAGAACTCCTGCTCTaGTTGCACAGCTGGAAGGAGAGCACGTCGGTCATAGGACCTACA +
Preference number: 2 (lower is better)
Translates to: MLCHLFDFLLIELLL*LHSWKESTSVIGPT
Trigger: TGTAGGTCCTATGACCGACGTGCTCTCCTTCCAGCTGTGCAACAAGAGCAGGAGTTCTATGAGCAGAAAATCAAAGAGATGGCAGAGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389900.8
3UTR-3UTR CCA 90 bp ACAAAAGTCCCAGTTACATATGATACAGGCTTTTTACACACAGTAGTTGAAACGCCTGGAGAACCAGGGTaGGTGCTCACGGCAGCCCTG +
Preference number: 2 (lower is better)
Translates to: TKVPVTYDTGFLHTVVETPGEPG*VLTAAL
Trigger: CAGGGCTGCCGTGAGCACCCACCCTGGTTCTCCAGG...CGTTTCAACTACTGTGTGTAAAAAGCCTGTATCATATGTAACTGGGACTTTTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
3UTR CAA 90 bp TTCCATGCAGCTGAGCTCCAACTTTCCAGATCCAAAGACTGCCTCTaGGGCATATCTGATGAGACACTCTTTGCAGAACAAGTGAGCATC +
Preference number: 2 (lower is better)
Translates to: FHAAELQLSRSKDCL*GISDETLFAEQVSI
Trigger: GATGCTCACTTGTTCTGCAAAGAGTGTCTCATCAGATATGCCCAAGAGGCAGTCTTTGGATCTGGAAAGTTGGAGCTCAGCTGCATGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389900.8
3UTR-3UTR TCA 90 bp GTAGGCTGCCGCAACCTCCTCCTCGGCTTTTCGCTCATAGTACTTATACAGGATAGCTGGCCATCCTTTTaGTACTGTTCTTCATTCATC +
Preference number: 2 (lower is better)
Translates to: VGCRNLLLGFSLIVLIQDSWPSF*YCSSFI
Trigger: GATGAATGAAGAACAGTATCAAAAGGATGGCCAGCT...ATCCTGTATAAGTACTATGAGCGAAAAGCCGAGGAGGAGGTTGCGGCAGCCTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389900.8
3UTR-3UTR TCA 90 bp TCAGAATCATCTTCTGTCAGGATGACATCATCATCCAGGTCCTCTTCTTCATGCAGGAGTCAGATATGGTaGTGGGCCCATCTCGGAGAT +
Preference number: 2 (lower is better)
Translates to: SESSSVRMTSSSRSSSSCRSQIW*WAHLGD
Trigger: ATCTCCGAGATGGGCCCATCACCATATCTGACTCCT...GCATGAAGAAGAGGACCTGGATGATGATGTCATCCTGACAGAAGATGATTCTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411812.1
3UTR-3UTR CCA 90 bp TCTCCATCCACACTCCTACCCCAAACGGGCTTTGTGCTGCTCAATGGGGATTCGGGATGTTGGCAGAAATaGTCATATCCATTAATAGAA +
Preference number: 2 (lower is better)
Translates to: SPSTLLPQTGFVLLNGDSGCWQK*SYPLIE
Trigger: TTCTATTAATGGATATGACCATTTCTGCCAACATCC...CGAATCCCCATTGAGCAGCACAAAGCCCGTTTGGGGTAGGAGTGTGGATGGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389900.8
3UTR-3UTR GCA 90 bp TCTGATGAGACACTCTTTGCAGAACAAGTGAGCATCTGCGCACTGCGTCAGCTCAAAGTCTTCATGCTCTaGCATCTCTTTGATTTTCTG +
Preference number: 2 (lower is better)
Translates to: SDETLFAEQVSICALRQLKVFML*HLFDFL
Trigger: CAGAAAATCAAAGAGATGGCAGAGCATGAAGACTTT...GAGCTGACGCAGTGCGCAGATGCTCACTTGTTCTGCAAAGAGTGTCTCATCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389900.8
3UTR-3UTR GCA 90 bp ACAAAAGTCCCAGTTACATATGATACAGGCTTTTTACACACAGTAGTTGAAACGCGAAGACAATCCTGTTaGTGCCGCATGGAGCCTGCC +
Preference number: 2 (lower is better)
Translates to: TKVPVTYDTGFLHTVVETRRQSC*CRMEPA
Trigger: GGCAGGCTCCATGCGGCAGCAACAGGATTGTCTTCG...CGTTTCAACTACTGTGTGTAAAAAGCCTGTATCATATGTAACTGGGACTTTTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
3UTR-3UTR CCA 90 bp ATGGAAATTCCCCATAGCAGCAGCGACACTCAATCAGCTGGCCATCCTTTTGATCCCATTTGCTACATCTaGAAATCTTGCTTCCTAGAA +
Preference number: 2 (lower is better)
Translates to: MEIPHSSSDTQSAGHPFDPICYI*KSCFLE
Trigger: TTCTAGGAAGCAAGATTTCCAGATGTAGCAAATGGG...ATCAAAAGGATGGCCAGCTGATTGAGTGTCGCTGCTGCTATGGGGAATTTCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389900.8
3UTR-3UTR CCA 90 bp ACAAAAGTCCCAGTTACATATGATACAGGCTTTTTACACACAGTAGTTGAAACGTACAGACACCAGCCTTaGGGGAGGGTTCTCCATCCA +
Preference number: 2 (lower is better)
Translates to: TKVPVTYDTGFLHTVVETYRHQP*GRVLHP
Trigger: TGGATGGAGAACCCTCCCCCAAGGCTGGTGTCTGTA...CGTTTCAACTACTGTGTGTAAAAAGCCTGTATCATATGTAACTGGGACTTTTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
3UTR GCA 72 bp CCGTGGGCCCCTCCAGGGAGATGCTCTCGGCTGCCTTaGTACCCAGGGGTCGGCTCCGAGGAGAGGCCCAGG +
Preference number: 3 (lower is better)
Translates to: PWAPPGRCSRLP*YPGVGSEERPR
Trigger: CCTGGGCCTCTCCTCGGAGCCGACCCCTGGGTAGCAAGGCAGCCGAGAGCATCTCCCTGGAGGGGCCCACGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
3UTR GCA 72 bp CTGCCCTTGGCCCAACCGTGGGCCCCTCCAGGGAGATaGTCTCGGCTGCCTTGCTACCCAGGGGTCGGCTCC +
Preference number: 3 (lower is better)
Translates to: LPLAQPWAPPGR*SRLPCYPGVGS
Trigger: GGAGCCGACCCCTGGGTAGCAAGGCAGCCGAGAGCATCTCCCTGGAGGGGCCCACGGTTGGGCCAAGGGCAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
3UTR CCA 72 bp AGGCACCTTGGGTGGGCCAGGCCCTGCTTCAGGAGGTaGCGGGCCACTCCGGAGACTGATGCAGCCCCACCC +
Preference number: 3 (lower is better)
Translates to: RHLGWARPCFRR*RATPETDAAPP
Trigger: GGGTGGGGCTGCATCAGTCTCCGGAGTGGCCCGCCACCTCCTGAAGCAGGGCCTGGCCCACCCAAGGTGCCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
3UTR CCA 72 bp CCTGGAGAACCAGGGTGGGTGCTCACGGCAGCCCTGTaGTCCCCCGTGCCTGGCTCGGGGAGGATCCTCAGG +
Preference number: 3 (lower is better)
Translates to: PGEPGWVLTAAL*SPVPGSGRILR
Trigger: CCTGAGGATCCTCCCCGAGCCAGGCACGGGGGACCACAGGGCTGCCGTGAGCACCCACCCTGGTTCTCCAGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
3UTR CCA 72 bp TGGGTGCGCGAAGGCATAGGGTGGCATCTGTGGCTGTaGCAGGTTCTGCGGAACGGGCCTCGGGAGGGCCTC +
Preference number: 3 (lower is better)
Translates to: WVREGIGWHLWL*QVLRNGPREGL
Trigger: GAGGCCCTCCCGAGGCCCGTTCCGCAGAACCTGCCACAGCCACAGATGCCACCCTATGCCTTCGCGCACCCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389900.8
3UTR TCA 72 bp GCCCTGCTTCAGGAGGTGGCGGGCCACTCCGGAGACTaGTGCAGCCCCACCCCAATGGTTGTCGGACTCAGC +
Preference number: 3 (lower is better)
Translates to: ALLQEVAGHSGD*CSPTPMVVGLS
Trigger: GCTGAGTCCGACAACCATTGGGGTGGGGCTGCATCAGTCTCCGGAGTGGCCCGCCACCTCCTGAAGCAGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
3UTR GCA 72 bp GGAGCCAGCTGCCTCAGGGTTGCCTGTTGTCTGACCTaGTCTCTGGGCACTGGCACGGCCCCTTGCTGGCTG +
Preference number: 3 (lower is better)
Translates to: GASCLRVACCLT*SLGTGTAPCWL
Trigger: CAGCCAGCAAGGGGCCGTGCCAGTGCCCAGAGAGCAGGTCAGACAACAGGCAACCCTGAGGCAGCTGGCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
3UTR CCA 72 bp GAAGGGTGGGTGCGCGAAGGCATAGGGTGGCATCTGTaGCTGTGGCAGGTTCTGCGGAACGGGCCTCGGGAG +
Preference number: 3 (lower is better)
Translates to: EGWVREGIGWHL*LWQVLRNGPRE
Trigger: CTCCCGAGGCCCGTTCCGCAGAACCTGCCACAGCCACAGATGCCACCCTATGCCTTCGCGCACCCACCCTTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389900.8
3UTR TCA 72 bp GCTCCAGGGGCATGTGGATGGGACCGAAGTCATAGTTaGCCCGCACGTTGGGCAGAGGGGGCACGTACGGGG +
Preference number: 3 (lower is better)
Translates to: APGACGWDRSHS*PARWAEGARTG
Trigger: CCCCGTACGTGCCCCCTCTGCCCAACGTGCGGGTCAACTATGACTTCGGTCCCATCCACATGCCCCTGGAGC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389900.8
3UTR TCA 72 bp GAGAGGGAGCCAGCTGCCTCAGGGTTGCCTGTTGTCTaGCCTGCTCTCTGGGCACTGGCACGGCCCCTTGCT +
Preference number: 3 (lower is better)
Translates to: EREPAASGLPVV*PALWALARPLA
Trigger: AGCAAGGGGCCGTGCCAGTGCCCAGAGAGCAGGTCAGACAACAGGCAACCCTGAGGCAGCTGGCTCCCTCTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
3UTR CCA 72 bp GGGCACGTACGGGGCTGGGATAGGCCCCATGTTGAGTaGGAAGTTGTTGAACACAGGCCGCACGGGAGGCAG +
Preference number: 3 (lower is better)
Translates to: GHVRGWDRPHVE*EVVEHRPHGRQ
Trigger: CTGCCTCCCGTGCGGCCTGTGTTCAACAACTTCCCACTCAACATGGGGCCTATCCCAGCCCCGTACGTGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389900.8
3UTR CCA 72 bp ATCAGAAGCGATGCCGCGGCTGGGGGCCAAAGTGCATaGGCAGGTTGTGCTCCAGGGGCATGTGGATGGGAC +
Preference number: 3 (lower is better)
Translates to: IRSDAAAGGQSA*AGCAPGACGWD
Trigger: GTCCCATCCACATGCCCCTGGAGCACAACCTGCCCATGCACTTTGGCCCCCAGCCGCGGCATCGCTTCTGAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389900.8
3UTR CCA 72 bp GAAGACCCCCAGTGCTTCTCTCCCCAATGCTGTCACTaGTCCAGGCAGGAGCCCGAGGTTCAGGCCCTGCCT +
Preference number: 3 (lower is better)
Translates to: EDPQCFSPQCCH*SRQEPEVQALP
Trigger: AGGCAGGGCCTGAACCTCGGGCTCCTGCCTGGACCAGTGACAGCATTGGGGAGAGAAGCACTGGGGGTCTTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
3UTR CCA 72 bp TCTCCAGTTTTAAGGCAAGTAAGAGGGGGCTGTGGCTaGGGAGCCTCACGCCCTGCGGCAAGCCCTGCAGGG +
Preference number: 3 (lower is better)
Translates to: SPVLRQVRGGCG*GASRPAASPAG
Trigger: CCCTGCAGGGCTTGCCGCAGGGCGTGAGGCTCCCCAGCCACAGCCCCCTCTTACTTGCCTTAAAACTGGAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
3UTR TCA 72 bp ACCCCCGCCGCGAGATGGGTCTGCTGCTGCCTCATCTaGGTAGGTGTAAGAGGGGAGGAGAGGTGCCCTCAA +
Preference number: 3 (lower is better)
Translates to: TPAARWVCCCLI*VGVRGEERCPQ
Trigger: TTGAGGGCACCTCTCCTCCCCTCTTACACCTACTCAGATGAGGCAGCAGCAGACCCATCTCGCGGCGGGGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
3UTR-3UTR CAA 90 bp AGGCTTCAGACCTCTCATCTGTCAATGGGCCAGAGTGATGCCTCAGGCACCGCTGCAGAAGGACTGCCGTaGGTGGCCTGGGGGATGCGA +
Preference number: 3 (lower is better)
Translates to: RLQTSHLSMGQSDASGTAAEGLP*VAWGMR
Trigger: TCGCATCCCCCAGGCCACCAACGGCAGTCCTTCTGC...AGCGGTGCCTGAGGCATCACTCTGGCCCATTGACAGATGAGAGGTCTGAAGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
3UTR GCA 72 bp ACAGGACGGGCACCTGACAAGCTCGTCGGCGTAGGCTaGCGCAACCTCCTCCTCGGCTTTTCGCTCATAGTA +
Preference number: 3 (lower is better)
Translates to: TGRAPDKLVGVG*RNLLLGFSLIV
Trigger: TACTATGAGCGAAAAGCCGAGGAGGAGGTTGCGGCAGCCTACGCCGACGAGCTTGTCAGGTGCCCGTCCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389900.8
3UTR GCA 72 bp GTCACCTCTTCAGCTGTGATGTCTACAGCCGCCCTCTaGTCCCAGAGATCCTCCCTGGGGAAGCACAGGGAG +
Preference number: 3 (lower is better)
Translates to: VTSSAVMSTAAL*SQRSSLGKHRE
Trigger: CTCCCTGTGCTTCCCCAGGGAGGATCTCTGGGAGCAGAGGGCGGCTGTAGACATCACAGCTGAAGAGGTGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
3UTR CCA 72 bp GTGGGATCGGTCCAGAGAGAGCATCTTGAACACTCCTaGCAAGGGGCTCCTGGTGAGCGGGGATGTTGGCAG +
Preference number: 3 (lower is better)
Translates to: VGSVQREHLEHS*QGAPGERGCWQ
Trigger: CTGCCAACATCCCCGCTCACCAGGAGCCCCTTGCCAGGAGTGTTCAAGATGCTCTCTCTGGACCGATCCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389900.8
3UTR CCA 72 bp TGTGAGCAGCAGGGACCTGGTCTATGGCCTATGCCATaGACAAGGCAGAAGGACTGCCGTTGGTGGCCTGGG +
Preference number: 3 (lower is better)
Translates to: CEQQGPGLWPMP*TRQKDCRWWPG
Trigger: CCCAGGCCACCAACGGCAGTCCTTCTGCCTTGTCCATGGCATAGGCCATAGACCAGGTCCCTGCTGCTCACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
3UTR CCA 72 bp GAGAGGCCCAGGTGTGAGCAGCAGGGACCTGGTCTATaGCCTATGCCATGGACAAGGCAGAAGGACTGCCGT +
Preference number: 3 (lower is better)
Translates to: ERPRCEQQGPGL*PMPWTRQKDCR
Trigger: ACGGCAGTCCTTCTGCCTTGTCCATGGCATAGGCCATAGACCAGGTCCCTGCTGCTCACACCTGGGCCTCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
3UTR CCA 72 bp CCTCAACACTCACTGCAGTGGCGCACGGGTTTTGGATaGGGGGACAGCATCTTGGCCCTCACAGCTGTGGCA +
Preference number: 3 (lower is better)
Translates to: PQHSLQWRTGFG*GDSILALTAVA
Trigger: TGCCACAGCTGTGAGGGCCAAGATGCTGTCCCCCCATCCAAAACCCGTGCGCCACTGCAGTGAGTGTTGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
3UTR CCA 72 bp CGGGCCACTCCGGAGACTGATGCAGCCCCACCCCAATaGTTGTCGGACTCAGCTGTGTCTGAGGTCTGTGAA +
Preference number: 3 (lower is better)
Translates to: RATPETDAAPPQ*LSDSAVSEVCE
Trigger: TTCACAGACCTCAGACACAGCTGAGTCCGACAACCATTGGGGTGGGGCTGCATCAGTCTCCGGAGTGGCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
3UTR CCA 72 bp GAAAGAGGCCGCCGCTCCTTCCCCACCAGCCCAGTGTaGCCAGAACAGCTGGAACTCCTCTCAAATGACCCA +
Preference number: 3 (lower is better)
Translates to: ERGRRSFPTSPV*PEQLELLSNDP
Trigger: TGGGTCATTTGAGAGGAGTTCCAGCTGTTCTGGCCACACTGGGCTGGTGGGGAAGGAGCGGCGGCCTCTTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
3UTR-3UTR CAA 90 bp GTGTCTGAGGTCTGTGAACTCCCAGCCTCTCAGAACCCCATGGCAACACGACAAGCAGAAGGACTGCCGTaGGTGGCCTGGGGGATGCGA +
Preference number: 3 (lower is better)
Translates to: VSEVCELPASQNPMATRQAEGLP*VAWGMR
Trigger: TCGCATCCCCCAGGCCACCAACGGCAGTCCTTCTGC...TTGTCGTGTTGCCATGGGGTTCTGAGAGGCTGGGAGTTCACAGACCTCAGACAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
3UTR TCA 72 bp GAGTGGGGACATGGCAGGGCTGAGCTGATGCTCAGCTaGCTCCATGAGAAGGGAAGTGACCTTCACATGGGG +
Preference number: 3 (lower is better)
Translates to: EWGHGRAELMLS*LHEKGSDLHMG
Trigger: CCCCATGTGAAGGTCACTTCCCTTCTCATGGAGTCAGCTGAGCATCAGCTCAGCCCTGCCATGTCCCCACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
3UTR-3UTR CAA 90 bp TGCACCTTCTCCACAGGCTTCTCCAGCGGGGGTCCAATGCGTTTGAAGGTGTTCTCCAGAGAGAGCATCTaGAACACTCCTGGCAAGGGG +
Preference number: 3 (lower is better)
Translates to: CTFSTGFSSGGPMRLKVFSRESI*NTPGKG
Trigger: CCCCTTGCCAGGAGTGTTCAAGATGCTCTCTCTGGA...GAACACCTTCAAACGCATTGGACCCCCGCTGGAGAAGCCTGTGGAGAAGGTGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389900.8
3UTR-3UTR CAA 90 bp ACAGCATCTTGGCCCTCACAGCTGTGGCAGTGCCTCTGCGGGCCATGGTCCCAGTCCGAACTCCACCATTaGGGACGTCTTTATTATGGA +
Preference number: 3 (lower is better)
Translates to: TASWPSQLWQCLCGPWSQSELHH*GRLYYG
Trigger: TCCATAATAAAGACGTCCCAAATGGTGGAGTTCGGA...CTGGGACCATGGCCCGCAGAGGCACTGCCACAGCTGTGAGGGCCAAGATGCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
3UTR-3UTR CAA 90 bp TTCAGGCTAGTAGCAAAGTTCAGGCAGTCCAACAGGTATGGGCGCCAGCAAGGAGCCCCACCCCAATGGTaGTCGGACTCAGCTGTGTCT +
Preference number: 3 (lower is better)
Translates to: FRLVAKFRQSNRYGRQQGAPPQW*SDSAVS
Trigger: AGACACAGCTGAGTCCGACAACCATTGGGGTGGGGC...TCCTTGCTGGCGCCCATACCTGTTGGACTGCCTGAACTTTGCTACTAGCCTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
3UTR CCA 72 bp TGTGGCCAGGAAGGCTTCAGACCTCTCATCTGTCAATaGGCCAGAGTGATGCCTCAGGCACCGCTAGAAACC +
Preference number: 3 (lower is better)
Translates to: CGQEGFRPLICQ*ARVMPQAPLET
Trigger: GGTTTCTAGCGGTGCCTGAGGCATCACTCTGGCCCATTGACAGATGAGAGGTCTGAAGCCTTCCTGGCCACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
3UTR CCA 72 bp CCCACTTTAGTCCTTGAAATACATCTGAGAAGCCAATaGCAGCGAATGACGGTGCCCGCCTGCCCCAGGCAC +
Preference number: 3 (lower is better)
Translates to: PTLVLEIHLRSQ*QRMTVPACPRH
Trigger: GTGCCTGGGGCAGGCGGGCACCGTCATTCGCTGCCATTGGCTTCTCAGATGTATTTCAAGGACTAAAGTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
3UTR CCA 72 bp TGTCTACAGCCGCCCTCTGCTCCCAGAGATCCTCCCTaGGGAAGCACAGGGAGCATATTTAAGGTACCGAAG +
Preference number: 3 (lower is better)
Translates to: CLQPPSAPRDPP*GSTGSIFKVPK
Trigger: CTTCGGTACCTTAAATATGCTCCCTGTGCTTCCCCAGGGAGGATCTCTGGGAGCAGAGGGCGGCTGTAGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
3UTR-3UTR CAA 90 bp GGGTTCTCCATCCACACTCCTACCCCAAACGGGCTTTGTGCTGCTCAATGGGGATTGCAGCCTTCAGATTaGATGAGGCCAGTCCCACAC +
Preference number: 3 (lower is better)
Translates to: GFSIHTPTPNGLCAAQWGLQPSD*MRPVPH
Trigger: GTGTGGGACTGGCCTCATCAAATCTGAAGGCTGCAA...TCCCCATTGAGCAGCACAAAGCCCGTTTGGGGTAGGAGTGTGGATGGAGAACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389900.8
3UTR GCA 72 bp GTACCGAAGACAATCCTGTTGCTGCCGCATGGAGCCTaGCTTTCCAAGGCACTGTCGTTCAGGCTAGTAGCA +
Preference number: 3 (lower is better)
Translates to: VPKTILLLPHGA*LSKALSFRLVA
Trigger: TGCTACTAGCCTGAACGACAGTGCCTTGGAAAGGCAGGCTCCATGCGGCAGCAACAGGATTGTCTTCGGTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
3UTR-3UTR CAA 90 bp TCTCCATCCACACTCCTACCCCAAACGGGCTTTGTGCTGCTCAATGGGGATTCGATGTTGAGTGGGAAGTaGTTGAACACAGGCCGCACG +
Preference number: 3 (lower is better)
Translates to: SPSTLLPQTGFVLLNGDSMLSGK*LNTGRT
Trigger: CGTGCGGCCTGTGTTCAACAACTTCCCACTCAACAT...CGAATCCCCATTGAGCAGCACAAAGCCCGTTTGGGGTAGGAGTGTGGATGGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389900.8
3UTR TCA 72 bp CCAGGTCCTCTTCTTCATGCTGCTGAGGAGCTGGGGTaGCCAGCATTGGAATCCTTTCCTCATCTGAGGAGT +
Preference number: 3 (lower is better)
Translates to: PGPLLHAAEELG*PALESFPHLRS
Trigger: ACTCCTCAGATGAGGAAAGGATTCCAATGCTGGTCACCCCAGCTCCTCAGCAGCATGAAGAAGAGGACCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411812.1
3UTR CCA 72 bp CAAGTGAGCATCTGCGCACTGCGTCAGCTCCTCGAATaGAAATTCCCCATAGCAGCAGCGACACTCAATCAG +
Preference number: 3 (lower is better)
Translates to: QVSICALRQLLE*KFPIAAATLNQ
Trigger: CTGATTGAGTGTCGCTGCTGCTATGGGGAATTTCCATTCGAGGAGCTGACGCAGTGCGCAGATGCTCACTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389900.8
3UTR CCA 72 bp TCAGCTGACTCCATGAGAAGGGAAGTGACCTTCACATaGGGGATACTGGACAGCACCCTCTACCTGCCTTCA +
Preference number: 3 (lower is better)
Translates to: SADSMRREVTFT*GILDSTLYLPS
Trigger: TGAAGGCAGGTAGAGGGTGCTGTCCAGTATCCCCCATGTGAAGGTCACTTCCCTTCTCATGGAGTCAGCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
3UTR CCA 72 bp CAGAACAGCTGGAACTCCTCTCAAATGACCCACCCCTaGGGTTTGGCCTTAGGAGAAACATCACTCTGGGCT +
Preference number: 3 (lower is better)
Translates to: QNSWNSSQMTHP*GLALGETSLWA
Trigger: AGCCCAGAGTGATGTTTCTCCTAAGGCCAAACCCCAGGGGTGGGTCATTTGAGAGGAGTTCCAGCTGTTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
3UTR-3UTR CAA 90 bp CAGCCTTCAGATTTGATGAGGCCAGTCCCACACTTGTGGCATTTTCTAATGCGGTCTCCAGCTCACTGGTaGGGAACGAACACGTGCAGC +
Preference number: 3 (lower is better)
Translates to: QPSDLMRPVPHLWHFLMRSPAHW*GTNTCS
Trigger: GCTGCACGTGTTCGTTCCCAACCAGTGAGCTGGAGA...CCGCATTAGAAAATGCCACAAGTGTGGGACTGGCCTCATCAAATCTGAAGGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389900.8
3UTR GCA 72 bp GAAGAAAACCAGCCTACCCTTCAAGCTGACTTAGGATaGAATGGTACAGACACCAGCCTTGGGGGAGGGTTC +
Preference number: 3 (lower is better)
Translates to: EENQPTLQADLG*NGTDTSLGGGF
Trigger: GAACCCTCCCCCAAGGCTGGTGTCTGTACCATTGCATCCTAAGTCAGCTTGAAGGGTAGGCTGGTTTTCTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389900.8
ENST00000389902.8
ENST00000425013.6
3UTR GCA 72 bp GGAGCATATTTAAGGTACCGAAGACAATCCTGTTGCTaGCGCATGGAGCCTGCCTTTCCAAGGCACTGTCGT +
Preference number: 3 (lower is better)
Translates to: GAYLRYRRQSCC*RMEPAFPRHCR
Trigger: ACGACAGTGCCTTGGAAAGGCAGGCTCCATGCGGCAGCAACAGGATTGTCTTCGGTACCTTAAATATGCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
3UTR TCA 72 bp TGGGCATATCTGATGAGACACTCTTTGCAGAACAAGTaGGCATCTGCGCACTGCGTCAGCTCCTCGAATGGA +
Preference number: 3 (lower is better)
Translates to: WAYLMRHSLQNK*ASAHCVSSSNG
Trigger: TCCATTCGAGGAGCTGACGCAGTGCGCAGATGCTCACTTGTTCTGCAAAGAGTGTCTCATCAGATATGCCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389900.8
3UTR TCA 72 bp AAAGGGGTGGGAAGAAAACCAGCCTACCCTTCAAGCTaGCTTAGGATGCAATGGTACAGACACCAGCCTTGG +
Preference number: 3 (lower is better)
Translates to: KGVGRKPAYPSS*LRMQWYRHQPW
Trigger: CCAAGGCTGGTGTCTGTACCATTGCATCCTAAGTCAGCTTGAAGGGTAGGCTGGTTTTCTTCCCACCCCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389900.8
ENST00000389902.8
ENST00000425013.6
3UTR GCA 72 bp TCTGATGAGACACTCTTTGCAGAACAAGTGAGCATCTaGGCACTGCGTCAGCTCCTCGAATGGAAATTCCCC +
Preference number: 3 (lower is better)
Translates to: SDETLFAEQVSI*ALRQLLEWKFP
Trigger: GGGGAATTTCCATTCGAGGAGCTGACGCAGTGCGCAGATGCTCACTTGTTCTGCAAAGAGTGTCTCATCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389900.8
3UTR CCA 72 bp CACTCCTGGCAAGGGGCTCCTGGTGAGCGGGGATGTTaGCAGAAATGGTCATATCCATTAATAGAAACTCGA +
Preference number: 3 (lower is better)
Translates to: HSWQGAPGERGC*QKWSYPLIETR
Trigger: TCGAGTTTCTATTAATGGATATGACCATTTCTGCCAACATCCCCGCTCACCAGGAGCCCCTTGCCAGGAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389900.8
3UTR-3UTR CAA 90 bp TCCAGGAGGCCCAAGATCCAGAAATTCACCGTAGTCATCCTCAGAATCATCTTCGGCCCATCTCGGAGATaGATCCACTCTGTAATCCCA +
Preference number: 3 (lower is better)
Translates to: SRRPKIQKFTVVILRIIFGPSRR*IHSVIP
Trigger: TGGGATTACAGAGTGGATCAATCTCCGAGATGGGCC...GAAGATGATTCTGAGGATGACTACGGTGAATTTCTGGATCTTGGGCCTCCTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411812.1
3UTR CCA 72 bp TTTCTGCTCATAGAACTCCTGCTCTTGTTGCACAGCTaGAAGGAGAGCACGTCGGTCATAGGACCTACAATG +
Preference number: 3 (lower is better)
Translates to: FLLIELLLLLHS*KESTSVIGPTM
Trigger: CATTGTAGGTCCTATGACCGACGTGCTCTCCTTCCAGCTGTGCAACAAGAGCAGGAGTTCTATGAGCAGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389900.8
3UTR CCA 72 bp CAGTTCACATCGCAGCTCTCTCCGAACTCCACCATTTaGGACGTCTTTATTATGGATCCGTCCACTCTTCCA +
Preference number: 3 (lower is better)
Translates to: QFTSQLSPNSTI*DVFIMDPSTLP
Trigger: TGGAAGAGTGGACGGATCCATAATAAAGACGTCCCAAATGGTGGAGTTCGGAGAGAGCTGCGATGTGAACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
3UTR-3UTR CAA 90 bp GTCATATCCATTAATAGAAACTCGACAGAGGTAGCACATCTGGGCACCACAGCGATAGAACTCCTGCTCTaGTTGCACAGCTGGAAGGAG +
Preference number: 3 (lower is better)
Translates to: VISINRNSTEVAHLGTTAIELLL*LHSWKE
Trigger: CTCCTTCCAGCTGTGCAACAAGAGCAGGAGTTCTAT...CGCTGTGGTGCCCAGATGTGCTACCTCTGTCGAGTTTCTATTAATGGATATGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389900.8
3UTR-3UTR CAA 90 bp CCTTCAGATTTGATGAGGCCAGTCCCACACTTGTGGCATTTTCTAATGCGGGCATCCAAAGACTGCCTCTaGGGCATATCTGATGAGACA +
Preference number: 3 (lower is better)
Translates to: PSDLMRPVPHLWHFLMRASKDCL*GISDET
Trigger: TGTCTCATCAGATATGCCCAAGAGGCAGTCTTTGGA...TGCCCGCATTAGAAAATGCCACAAGTGTGGGACTGGCCTCATCAAATCTGAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389900.8
3UTR-3UTR CAA 90 bp TCTGATGAGACACTCTTTGCAGAACAAGTGAGCATCTGCGCACTGCGTCAGCTCCAGCTGGCCATCCTTTaGATACTGTTCTTCATTCAT +
Preference number: 3 (lower is better)
Translates to: SDETLFAEQVSICALRQLQLAIL*ILFFIH
Trigger: ATGAATGAAGAACAGTATCAAAAGGATGGCCAGCTG...GAGCTGACGCAGTGCGCAGATGCTCACTTGTTCTGCAAAGAGTGTCTCATCAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389900.8
3UTR CCA 72 bp CTGAGCTCCAACTTTCCAGATCCAAAGACTGCCTCTTaGGCATATCTGATGAGACACTCTTTGCAGAACAAG +
Preference number: 3 (lower is better)
Translates to: LSSNFPDPKTAS*AYLMRHSLQNK
Trigger: CTTGTTCTGCAAAGAGTGTCTCATCAGATATGCCCAAGAGGCAGTCTTTGGATCTGGAAAGTTGGAGCTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389900.8
CDS-3UTR GCA 90 bp GCCCTGTGGTCCCCCGTGCCTGGCTCGGGGAGGATCCTCAGGAATCAGGGACCCCCCTGTGGTCCCCCGTaGCTGGCTCGGGGAGGATCC +
Preference number: 4 (lower is better)
Translates to: ALWSPVPGSGRILRNQGPPCGPP*LARGGS
Trigger: GGATCCTCCCCGAGCCAGGCACGGGGGACCACAGGG...GGGTCCCTGATTCCTGAGGATCCTCCCCGAGCCAGGCACGGGGGACCACAGGGC
71% GC, longest homopolymer 6 nt, total homopolymer stretches 24 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR CCA 90 bp GTGGGCCCCTCCAGGGAGATGCTCTCGGCTGCCTTGCTACCCAGGGGTCGGCTCCTCACGGCAGCCCTGTaGTCCCCCGTGCCTGGCTCG +
Preference number: 4 (lower is better)
Translates to: VGPSREMLSAALLPRGRLLTAAL*SPVPGS
Trigger: CGAGCCAGGCACGGGGGACCACAGGGCTGCCGTGAG...GAGCCGACCCCTGGGTAGCAAGGCAGCCGAGAGCATCTCCCTGGAGGGGCCCAC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR GCA 90 bp CCTCCAGGGAGATGCTCTCGGCTGCCTTGCTACCCAGGGGTCGGCTCCGAGGAGAGGTGCAGCCCCCTCTaGCCTTGGCCCAACCGTGGG +
Preference number: 4 (lower is better)
Translates to: PPGRCSRLPCYPGVGSEERCSPL*PWPNRG
Trigger: CCCACGGTTGGGCCAAGGGCAGAGGGGGCTGCACCT...CTCCTCGGAGCCGACCCCTGGGTAGCAAGGCAGCCGAGAGCATCTCCCTGGAGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR GCA 90 bp GCCCTGTGGTCCCCCGTGCCTGGCTCGGGGAGGATCCTCAGGAATCAGGGACCCCCGAGGTTCAGGCCCTaGCTCTGGACAGAGGGGCCT +
Preference number: 4 (lower is better)
Translates to: ALWSPVPGSGRILRNQGPPRFRP*LWTEGP
Trigger: AGGCCCCTCTGTCCAGAGGCAGGGCCTGAACCTCGG...GGGTCCCTGATTCCTGAGGATCCTCCCCGAGCCAGGCACGGGGGACCACAGGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR CCA 90 bp CCTCCAGGGAGATGCTCTCGGCTGCCTTGCTACCCAGGGGTCGGCTCCGAGGAGCCCTTGGCCCAACCGTaGGCCCCTCCAGGGAGATGC +
Preference number: 4 (lower is better)
Translates to: PPGRCSRLPCYPGVGSEEPLAQP*APPGRC
Trigger: GCATCTCCCTGGAGGGGCCCACGGTTGGGCCAAGGG...CTCCTCGGAGCCGACCCCTGGGTAGCAAGGCAGCCGAGAGCATCTCCCTGGAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR CCA 90 bp GTGGGCCCCTCCAGGGAGATGCTCTCGGCTGCCTTGCTACCCAGGGGTCGGCTCACCCCCGCCGCGAGATaGGTCTGCTGCTGCCTCATC +
Preference number: 4 (lower is better)
Translates to: VGPSREMLSAALLPRGRLTPAAR*VCCCLI
Trigger: GATGAGGCAGCAGCAGACCCATCTCGCGGCGGGGGT...GAGCCGACCCCTGGGTAGCAAGGCAGCCGAGAGCATCTCCCTGGAGGGGCCCAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR CCA 90 bp CACACGGGGCAGGGGTGGCACCCAGGGTCACCTGTCTCCCTAAGGAGGCCCACTGTGGTCCCCCGTGCCTaGCTCGGGGAGGATCCTCAG +
Preference number: 4 (lower is better)
Translates to: HTGQGWHPGSPVSLRRPTVVPRA*LGEDPQ
Trigger: CTGAGGATCCTCCCCGAGCCAGGCACGGGGGACCAC...AGTGGGCCTCCTTAGGGAGACAGGTGACCCTGGGTGCCACCCCTGCCCCGTGTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR TCA 90 bp CTTGGGTGGGCCAGGCCCTGCTTCAGGAGGTGGCGGGCCACTCCGGAGACTGATGGCCACTCCGGAGACTaGTGCAGCCCCACCCCAATG +
Preference number: 4 (lower is better)
Translates to: LGWARPCFRRWRATPETDGHSGD*CSPTPM
Trigger: CATTGGGGTGGGGCTGCATCAGTCTCCGGAGTGGCC...ATCAGTCTCCGGAGTGGCCCGCCACCTCCTGAAGCAGGGCCTGGCCCACCCAAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR GCA 90 bp CCTCCAGGGAGATGCTCTCGGCTGCCTTGCTACCCAGGGGTCGGCTCCGAGGAGCCGAGGTTCAGGCCCTaGCTCTGGACAGAGGGGCCT +
Preference number: 4 (lower is better)
Translates to: PPGRCSRLPCYPGVGSEEPRFRP*LWTEGP
Trigger: AGGCCCCTCTGTCCAGAGGCAGGGCCTGAACCTCGG...CTCCTCGGAGCCGACCCCTGGGTAGCAAGGCAGCCGAGAGCATCTCCCTGGAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR GCA 90 bp ACAGCATCTTGGCCCTCACAGCTGTGGCAGTGCCTCTGCGGGCCATGGTCCCAGGGGAGCCTCACGCCCTaGGGCAAGCCCTGCAGGGCA +
Preference number: 4 (lower is better)
Translates to: TASWPSQLWQCLCGPWSQGSLTP*GKPCRA
Trigger: TGCCCTGCAGGGCTTGCCGCAGGGCGTGAGGCTCCC...CTGGGACCATGGCCCGCAGAGGCACTGCCACAGCTGTGAGGGCCAAGATGCTGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR CCA 90 bp GCCCTGTGGTCCCCCGTGCCTGGCTCGGGGAGGATCCTCAGGAATCAGGGACCCGGGCACGTACGGGGCTaGGATAGGCCCCATGTTGAG +
Preference number: 4 (lower is better)
Translates to: ALWSPVPGSGRILRNQGPGHVRG*DRPHVE
Trigger: CTCAACATGGGGCCTATCCCAGCCCCGTACGTGCCC...GGGTCCCTGATTCCTGAGGATCCTCCCCGAGCCAGGCACGGGGGACCACAGGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR CCA 90 bp CACACGGGGCAGGGGTGGCACCCAGGGTCACCTGTCTCCCTAAGGAGGCCCACTCCTGGAGAACCAGGGTaGGTGCTCACGGCAGCCCTG +
Preference number: 4 (lower is better)
Translates to: HTGQGWHPGSPVSLRRPTPGEPG*VLTAAL
Trigger: CAGGGCTGCCGTGAGCACCCACCCTGGTTCTCCAGG...AGTGGGCCTCCTTAGGGAGACAGGTGACCCTGGGTGCCACCCCTGCCCCGTGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR CCA 90 bp GAAACCCAGGGCCGGACAGGAGGCGAGGAGGGTGAGTGGGGACATGGCAGGGCTCGGCCCCTTGCTGGCTaGTCTGAAGACCCCCAGTGC +
Preference number: 4 (lower is better)
Translates to: ETQGRTGGEEGEWGHGRARPLAG*SEDPQC
Trigger: GCACTGGGGGTCTTCAGACCAGCCAGCAAGGGGCCG...AGCCCTGCCATGTCCCCACTCACCCTCCTCGCCTCCTGTCCGGCCCTGGGTTTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR CCA 90 bp CTTGGGTGGGCCAGGCCCTGCTTCAGGAGGTGGCGGGCCACTCCGGAGACTGATAGTAAGAGGGGGCTGTaGCTGGGGAGCCTCACGCCC +
Preference number: 4 (lower is better)
Translates to: LGWARPCFRRWRATPETDSKRGL*LGSLTP
Trigger: GGGCGTGAGGCTCCCCAGCCACAGCCCCCTCTTACT...ATCAGTCTCCGGAGTGGCCCGCCACCTCCTGAAGCAGGGCCTGGCCCACCCAAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR TCA 90 bp CCTCCAGGGAGATGCTCTCGGCTGCCTTGCTACCCAGGGGTCGGCTCCGAGGAGTACAGGACGGGCACCTaGCAAGCTCGTCGGCGTAGG +
Preference number: 4 (lower is better)
Translates to: PPGRCSRLPCYPGVGSEEYRTGT*QARRRR
Trigger: CCTACGCCGACGAGCTTGTCAGGTGCCCGTCCTGTA...CTCCTCGGAGCCGACCCCTGGGTAGCAAGGCAGCCGAGAGCATCTCCCTGGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR TCA 90 bp CCTCCAGGGAGATGCTCTCGGCTGCCTTGCTACCCAGGGGTCGGCTCCGAGGAGGCAAGGGGCTCCTGGTaGGCGGGGATGTTGGCAGAA +
Preference number: 4 (lower is better)
Translates to: PPGRCSRLPCYPGVGSEEARGSW*AGMLAE
Trigger: TTCTGCCAACATCCCCGCTCACCAGGAGCCCCTTGC...CTCCTCGGAGCCGACCCCTGGGTAGCAAGGCAGCCGAGAGCATCTCCCTGGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR TCA 90 bp ACCCTCCAAGGAAAGAGGCCGCCGCTCCTTCCCCACCAGCCCAGTGTGGCCAGACTCCCCTGCCAGGGTTaGGGCCAGCACCTGTCTAGG +
Preference number: 4 (lower is better)
Translates to: TLQGKRPPLLPHQPSVARLPCQG*GQHLSR
Trigger: CCTAGACAGGTGCTGGCCTCAACCCTGGCAGGGGAG...TCTGGCCACACTGGGCTGGTGGGGAAGGAGCGGCGGCCTCTTTCCTTGGAGGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR GCA 90 bp CTCATCACCCAGGGTGGCAGAAACGTCTCCCCCAGCAGTTGGGCTGCCCAGCAGCTCGTCGGCGTAGGCTaGCGCAACCTCCTCCTCGGC +
Preference number: 4 (lower is better)
Translates to: LITQGGRNVSPSSWAAQQLVGVG*RNLLLG
Trigger: GCCGAGGAGGAGGTTGCGGCAGCCTACGCCGACGAG...CTGCTGGGCAGCCCAACTGCTGGGGGAGACGTTTCTGCCACCCTGGGTGATGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR CCA 90 bp CACACGGGGCAGGGGTGGCACCCAGGGTCACCTGTCTCCCTAAGGAGGCCCACTGGGCACGTACGGGGCTaGGATAGGCCCCATGTTGAG +
Preference number: 4 (lower is better)
Translates to: HTGQGWHPGSPVSLRRPTGHVRG*DRPHVE
Trigger: CTCAACATGGGGCCTATCCCAGCCCCGTACGTGCCC...AGTGGGCCTCCTTAGGGAGACAGGTGACCCTGGGTGCCACCCCTGCCCCGTGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR CCA 90 bp GAAACCCAGGGCCGGACAGGAGGCGAGGAGGGTGAGTGGGGACATGGCAGGGCTCAGAAGGACTGCCGTTaGTGGCCTGGGGGATGCGAG +
Preference number: 4 (lower is better)
Translates to: ETQGRTGGEEGEWGHGRAQKDCR*WPGGCE
Trigger: CTCGCATCCCCCAGGCCACCAACGGCAGTCCTTCTG...AGCCCTGCCATGTCCCCACTCACCCTCCTCGCCTCCTGTCCGGCCCTGGGTTTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR CCA 90 bp GCCCTGTGGTCCCCCGTGCCTGGCTCGGGGAGGATCCTCAGGAATCAGGGACCCGCAGCCCCACCCCAATaGTTGTCGGACTCAGCTGTG +
Preference number: 4 (lower is better)
Translates to: ALWSPVPGSGRILRNQGPAAPPQ*LSDSAV
Trigger: CACAGCTGAGTCCGACAACCATTGGGGTGGGGCTGC...GGGTCCCTGATTCCTGAGGATCCTCCCCGAGCCAGGCACGGGGGACCACAGGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR CCA 90 bp GCCCTGTGGTCCCCCGTGCCTGGCTCGGGGAGGATCCTCAGGAATCAGGGACCCCCTGTTGCTGCCGCATaGAGCCTGCCTTTCCAAGGC +
Preference number: 4 (lower is better)
Translates to: ALWSPVPGSGRILRNQGPPVAAA*SLPFQG
Trigger: GCCTTGGAAAGGCAGGCTCCATGCGGCAGCAACAGG...GGGTCCCTGATTCCTGAGGATCCTCCCCGAGCCAGGCACGGGGGACCACAGGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR CCA 90 bp CACACGGGGCAGGGGTGGCACCCAGGGTCACCTGTCTCCCTAAGGAGGCCCACTGCCTGGGGCTCTTGCTaGAGCCACGTGCCTAGGGTA +
Preference number: 4 (lower is better)
Translates to: HTGQGWHPGSPVSLRRPTAWGSC*SHVPRV
Trigger: TACCCTAGGCACGTGGCTCCAGCAAGAGCCCCAGGC...AGTGGGCCTCCTTAGGGAGACAGGTGACCCTGGGTGCCACCCCTGCCCCGTGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
3UTR CAA 72 bp GCAGAGAGAGGGAGCCAGCTGCCTCAGGGTTGCCTGTaGTCTGACCTGCTCTCTGGGCACTGGCACGGCCCC +
Preference number: 4 (lower is better)
Translates to: AERGSQLPQGCL*SDLLSGHWHGP
Trigger: GGGGCCGTGCCAGTGCCCAGAGAGCAGGTCAGACAACAGGCAACCCTGAGGCAGCTGGCTCCCTCTCTCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR TCA 90 bp TGCCTGTTGTCTGACCTGCTCTCTGGGCACTGGCACGGCCCCTTGCTGGCTGGTGGAGAGGCCCAGGTGTaGGCAGCAGGGACCTGGTCT +
Preference number: 4 (lower is better)
Translates to: CLLSDLLSGHWHGPLLAGGEAQV*AAGTWS
Trigger: AGACCAGGTCCCTGCTGCTCACACCTGGGCCTCTCC...ACCAGCCAGCAAGGGGCCGTGCCAGTGCCCAGAGAGCAGGTCAGACAACAGGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR TCA 90 bp CCTCCAGGGAGATGCTCTCGGCTGCCTTGCTACCCAGGGGTCGGCTCCGAGGAGGCCTTCAGCAACCACTaGGAACACCCGGGGCACACA +
Preference number: 4 (lower is better)
Translates to: PPGRCSRLPCYPGVGSEEAFSNH*EHPGHT
Trigger: TGTGTGCCCCGGGTGTTCTCAGTGGTTGCTGAAGGC...CTCCTCGGAGCCGACCCCTGGGTAGCAAGGCAGCCGAGAGCATCTCCCTGGAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR TCA 90 bp CACACGGGGCAGGGGTGGCACCCAGGGTCACCTGTCTCCCTAAGGAGGCCCACTCCTTGCTGGCTGGTCTaGAGACCCCCAGTGCTTCTC +
Preference number: 4 (lower is better)
Translates to: HTGQGWHPGSPVSLRRPTPCWLV*RPPVLL
Trigger: GAGAAGCACTGGGGGTCTTCAGACCAGCCAGCAAGG...AGTGGGCCTCCTTAGGGAGACAGGTGACCCTGGGTGCCACCCCTGCCCCGTGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR GCA 90 bp CTCATCACCCAGGGTGGCAGAAACGTCTCCCCCAGCAGTTGGGCTGCCCAGCAGGGCCATCAGAAGCGATaGCGCGGCTGGGGGCCAAAG +
Preference number: 4 (lower is better)
Translates to: LITQGGRNVSPSSWAAQQGHQKR*RGWGPK
Trigger: CTTTGGCCCCCAGCCGCGGCATCGCTTCTGATGGCC...CTGCTGGGCAGCCCAACTGCTGGGGGAGACGTTTCTGCCACCCTGGGTGATGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR GCA 90 bp TGCCTGTTGTCTGACCTGCTCTCTGGGCACTGGCACGGCCCCTTGCTGGCTGGTTGCTCTCGGCTGCCTTaGTACCCAGGGGTCGGCTCC +
Preference number: 4 (lower is better)
Translates to: CLLSDLLSGHWHGPLLAGCSRLP*YPGVGS
Trigger: GGAGCCGACCCCTGGGTAGCAAGGCAGCCGAGAGCA...ACCAGCCAGCAAGGGGCCGTGCCAGTGCCCAGAGAGCAGGTCAGACAACAGGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR GCA 90 bp CCCCGCCGCGAGATGGGTCTGCTGCTGCCTCATCTGAGTAGGTGTAAGAGGGGAATGACGGTGCCCGCCTaGCCCAGGCACCTTGGGTGG +
Preference number: 4 (lower is better)
Translates to: PRREMGLLLPHLSRCKRGMTVPA*PRHLGW
Trigger: CCACCCAAGGTGCCTGGGGCAGGCGGGCACCGTCAT...TCCCCTCTTACACCTACTCAGATGAGGCAGCAGCAGACCCATCTCGCGGCGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR GCA 90 bp CTTGGGTGGGCCAGGCCCTGCTTCAGGAGGTGGCGGGCCACTCCGGAGACTGATCTGCTCCCTTTGTCCTaGCTGGGGCTCTTGCTGGAG +
Preference number: 4 (lower is better)
Translates to: LGWARPCFRRWRATPETDLLPLS*LGLLLE
Trigger: CTCCAGCAAGAGCCCCAGGCAGGACAAAGGGAGCAG...ATCAGTCTCCGGAGTGGCCCGCCACCTCCTGAAGCAGGGCCTGGCCCACCCAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR GCA 90 bp GCCCTGTGGTCCCCCGTGCCTGGCTCGGGGAGGATCCTCAGGAATCAGGGACCCGGCTGTTTCTGCAGCTaGTGCCTGCTCCCTTTGTCC +
Preference number: 4 (lower is better)
Translates to: ALWSPVPGSGRILRNQGPGCFCS*CLLPLS
Trigger: GGACAAAGGGAGCAGGCAGCAGCTGCAGAAACAGCC...GGGTCCCTGATTCCTGAGGATCCTCCCCGAGCCAGGCACGGGGGACCACAGGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR CCA 90 bp CTCATCACCCAGGGTGGCAGAAACGTCTCCCCCAGCAGTTGGGCTGCCCAGCAGAAGCGATGCCGCGGCTaGGGGCCAAAGTGCATGGGC +
Preference number: 4 (lower is better)
Translates to: LITQGGRNVSPSSWAAQQKRCRG*GPKCMG
Trigger: GCCCATGCACTTTGGCCCCCAGCCGCGGCATCGCTT...CTGCTGGGCAGCCCAACTGCTGGGGGAGACGTTTCTGCCACCCTGGGTGATGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR CCA 90 bp GAGGGGAGGGGCAGTTCACATCGCAGCTCTCTCCGAACTCCACCATTTGGGACGAGCCCCCTCTGCCCTTaGCCCAACCGTGGGCCCCTC +
Preference number: 4 (lower is better)
Translates to: EGRGSSHRSSLRTPPFGTSPLCP*PNRGPL
Trigger: GAGGGGCCCACGGTTGGGCCAAGGGCAGAGGGGGCT...CGTCCCAAATGGTGGAGTTCGGAGAGAGCTGCGATGTGAACTGCCCCTCCCCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR CCA 90 bp TGCCTGTTGTCTGACCTGCTCTCTGGGCACTGGCACGGCCCCTTGCTGGCTGGTTGGCCCTCACAGCTGTaGCAGTGCCTCTGCGGGCCA +
Preference number: 4 (lower is better)
Translates to: CLLSDLLSGHWHGPLLAGWPSQL*QCLCGP
Trigger: TGGCCCGCAGAGGCACTGCCACAGCTGTGAGGGCCA...ACCAGCCAGCAAGGGGCCGTGCCAGTGCCCAGAGAGCAGGTCAGACAACAGGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR CCA 90 bp CACACGGGGCAGGGGTGGCACCCAGGGTCACCTGTCTCCCTAAGGAGGCCCACTCGCACGGGTTTTGGATaGGGGGACAGCATCTTGGCC +
Preference number: 4 (lower is better)
Translates to: HTGQGWHPGSPVSLRRPTRTGFG*GDSILA
Trigger: GGCCAAGATGCTGTCCCCCCATCCAAAACCCGTGCG...AGTGGGCCTCCTTAGGGAGACAGGTGACCCTGGGTGCCACCCCTGCCCCGTGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR CCA 90 bp CACACGGGGCAGGGGTGGCACCCAGGGTCACCTGTCTCCCTAAGGAGGCCCACTGCTCATCACCCAGGGTaGCAGAAACGTCTCCCCCAG +
Preference number: 4 (lower is better)
Translates to: HTGQGWHPGSPVSLRRPTAHHPG*QKRLPQ
Trigger: CTGGGGGAGACGTTTCTGCCACCCTGGGTGATGAGC...AGTGGGCCTCCTTAGGGAGACAGGTGACCCTGGGTGCCACCCCTGCCCCGTGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR CCA 90 bp ACAGCATCTTGGCCCTCACAGCTGTGGCAGTGCCTCTGCGGGCCATGGTCCCAGCCCTGCTTCAGGAGGTaGCGGGCCACTCCGGAGACT +
Preference number: 4 (lower is better)
Translates to: TASWPSQLWQCLCGPWSQPCFRR*RATPET
Trigger: AGTCTCCGGAGTGGCCCGCCACCTCCTGAAGCAGGG...CTGGGACCATGGCCCGCAGAGGCACTGCCACAGCTGTGAGGGCCAAGATGCTGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR CCA 90 bp GTGGGCCCCTCCAGGGAGATGCTCTCGGCTGCCTTGCTACCCAGGGGTCGGCTCCCCAGAGATCCTCCCTaGGGAAGCACAGGGAGCATA +
Preference number: 4 (lower is better)
Translates to: VGPSREMLSAALLPRGRLPRDPP*GSTGSI
Trigger: TATGCTCCCTGTGCTTCCCCAGGGAGGATCTCTGGG...GAGCCGACCCCTGGGTAGCAAGGCAGCCGAGAGCATCTCCCTGGAGGGGCCCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR CCA 90 bp CCTCCAGGGAGATGCTCTCGGCTGCCTTGCTACCCAGGGGTCGGCTCCGAGGAGGGAGAAACATCACTCTaGGCTCCCCCTCCCCTGCCA +
Preference number: 4 (lower is better)
Translates to: PPGRCSRLPCYPGVGSEEGETSL*APPPLP
Trigger: TGGCAGGGGAGGGGGAGCCCAGAGTGATGTTTCTCC...CTCCTCGGAGCCGACCCCTGGGTAGCAAGGCAGCCGAGAGCATCTCCCTGGAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR CCA 90 bp GAAACCCAGGGCCGGACAGGAGGCGAGGAGGGTGAGTGGGGACATGGCAGGGCTTTCAGGCCCTGCCTCTaGACAGAGGGGCCTGGAGAA +
Preference number: 4 (lower is better)
Translates to: ETQGRTGGEEGEWGHGRAFRPCL*TEGPGE
Trigger: TTCTCCAGGCCCCTCTGTCCAGAGGCAGGGCCTGAA...AGCCCTGCCATGTCCCCACTCACCCTCCTCGCCTCCTGTCCGGCCCTGGGTTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR CCA 90 bp CACACGGGGCAGGGGTGGCACCCAGGGTCACCTGTCTCCCTAAGGAGGCCCACTTTCAGGCCCTGCCTCTaGACAGAGGGGCCTGGAGAA +
Preference number: 4 (lower is better)
Translates to: HTGQGWHPGSPVSLRRPTFRPCL*TEGPGE
Trigger: TTCTCCAGGCCCCTCTGTCCAGAGGCAGGGCCTGAA...AGTGGGCCTCCTTAGGGAGACAGGTGACCCTGGGTGCCACCCCTGCCCCGTGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR TCA 90 bp ACCCTCCAAGGAAAGAGGCCGCCGCTCCTTCCCCACCAGCCCAGTGTGGCCAGAGGGACATGGCAGGGCTaGGCTGATGCTCAGCTGACT +
Preference number: 4 (lower is better)
Translates to: TLQGKRPPLLPHQPSVARGTWQG*ADAQLT
Trigger: AGTCAGCTGAGCATCAGCTCAGCCCTGCCATGTCCC...TCTGGCCACACTGGGCTGGTGGGGAAGGAGCGGCGGCCTCTTTCCTTGGAGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR TCA 90 bp GAAACCCAGGGCCGGACAGGAGGCGAGGAGGGTGAGTGGGGACATGGCAGGGCTAGGAGGAGGAGAAAGTaGTGCCTGTGGCCAGGAAGG +
Preference number: 4 (lower is better)
Translates to: ETQGRTGGEEGEWGHGRARRRRK*CLWPGR
Trigger: CCTTCCTGGCCACAGGCATCACTTTCTCCTCCTCCT...AGCCCTGCCATGTCCCCACTCACCCTCCTCGCCTCCTGTCCGGCCCTGGGTTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR TCA 90 bp GCTGGCTGGTCTGAAGACCCCCAGTGCTTCTCTCCCCAATGCTGTCACTGGTCCGCCAATGGCAGCGAATaGCGGTGCCCGCCTGCCCCA +
Preference number: 4 (lower is better)
Translates to: AGWSEDPQCFSPQCCHWSANGSE*RCPPAP
Trigger: TGGGGCAGGCGGGCACCGTCATTCGCTGCCATTGGC...GGACCAGTGACAGCATTGGGGAGAGAAGCACTGGGGGTCTTCAGACCAGCCAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR TCA 90 bp CTTGGGTGGGCCAGGCCCTGCTTCAGGAGGTGGCGGGCCACTCCGGAGACTGATCCTGCCTCAGCCTCCTaGGTACCTGGGATTATAGGC +
Preference number: 4 (lower is better)
Translates to: LGWARPCFRRWRATPETDPASAS*VPGIIG
Trigger: GCCTATAATCCCAGGTACTCAGGAGGCTGAGGCAGG...ATCAGTCTCCGGAGTGGCCCGCCACCTCCTGAAGCAGGGCCTGGCCCACCCAAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR TCA 90 bp ACAGCATCTTGGCCCTCACAGCTGTGGCAGTGCCTCTGCGGGCCATGGTCCCAGGAGGCTCCCAGGGCCTaGGGTCACCTCTTCAGCTGT +
Preference number: 4 (lower is better)
Translates to: TASWPSQLWQCLCGPWSQEAPRA*GHLFSC
Trigger: ACAGCTGAAGAGGTGACCTCAGGCCCTGGGAGCCTC...CTGGGACCATGGCCCGCAGAGGCACTGCCACAGCTGTGAGGGCCAAGATGCTGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR GCA 90 bp CCTCCAGGGAGATGCTCTCGGCTGCCTTGCTACCCAGGGGTCGGCTCCGAGGAGCCTGAAATCCCACCTTaGTGGGGTTCCGGCCTTGGA +
Preference number: 4 (lower is better)
Translates to: PPGRCSRLPCYPGVGSEEPEIPP*WGSGLG
Trigger: TCCAAGGCCGGAACCCCAGCAAGGTGGGATTTCAGG...CTCCTCGGAGCCGACCCCTGGGTAGCAAGGCAGCCGAGAGCATCTCCCTGGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR GCA 90 bp GAGGGGAGGGGCAGTTCACATCGCAGCTCTCTCCGAACTCCACCATTTGGGACGGGCTGTGGCAGGTTCTaGGGAACGGGCCTCGGGAGG +
Preference number: 4 (lower is better)
Translates to: EGRGSSHRSSLRTPPFGTGCGRF*GTGLGR
Trigger: CCTCCCGAGGCCCGTTCCGCAGAACCTGCCACAGCC...CGTCCCAAATGGTGGAGTTCGGAGAGAGCTGCGATGTGAACTGCCCCTCCCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR GCA 90 bp CTCATCACCCAGGGTGGCAGAAACGTCTCCCCCAGCAGTTGGGCTGCCCAGCAGGGAGATGCTCTCGGCTaGCTTGCTACCCAGGGGTCG +
Preference number: 4 (lower is better)
Translates to: LITQGGRNVSPSSWAAQQGDALG*LATQGS
Trigger: CGACCCCTGGGTAGCAAGGCAGCCGAGAGCATCTCC...CTGCTGGGCAGCCCAACTGCTGGGGGAGACGTTTCTGCCACCCTGGGTGATGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR GCA 90 bp CCCTTTGTCCTGCCTGGGGCTCTTGCTGGAGCCACGTGCCTAGGGTACAGGGCAGCCCCTCCAGGGAGATaGTCTCGGCTGCCTTGCTAC +
Preference number: 4 (lower is better)
Translates to: PFVLPGALAGATCLGYRAAPPGR*SRLPCY
Trigger: GTAGCAAGGCAGCCGAGAGCATCTCCCTGGAGGGGC...TGCCCTGTACCCTAGGCACGTGGCTCCAGCAAGAGCCCCAGGCAGGACAAAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR GCA 90 bp CCCTTTGTCCTGCCTGGGGCTCTTGCTGGAGCCACGTGCCTAGGGTACAGGGCATCACAGCTGTGGCAGTaGCTCTGCGGGCCATGGTCC +
Preference number: 4 (lower is better)
Translates to: PFVLPGALAGATCLGYRASQLWQ*LCGPWS
Trigger: GGACCATGGCCCGCAGAGGCACTGCCACAGCTGTGA...TGCCCTGTACCCTAGGCACGTGGCTCCAGCAAGAGCCCCAGGCAGGACAAAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR GCA 90 bp CCAGGAAGGCTTCAGACCTCTCATCTGTCAATGGGCCAGAGTGATGCCTCAGGCGGGTGGGCCAGGCCCTaGTTCAGGAGGTGGCGGGCC +
Preference number: 4 (lower is better)
Translates to: PGRLQTSHLSMGQSDASGGWARP*FRRWRA
Trigger: GGCCCGCCACCTCCTGAAGCAGGGCCTGGCCCACCC...GCCTGAGGCATCACTCTGGCCCATTGACAGATGAGAGGTCTGAAGCCTTCCTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR GCA 90 bp ACCCTCCAAGGAAAGAGGCCGCCGCTCCTTCCCCACCAGCCCAGTGTGGCCAGAGCCTGTTGTCTGACCTaGTCTCTGGGCACTGGCACG +
Preference number: 4 (lower is better)
Translates to: TLQGKRPPLLPHQPSVARACCLT*SLGTGT
Trigger: CGTGCCAGTGCCCAGAGAGCAGGTCAGACAACAGGC...TCTGGCCACACTGGGCTGGTGGGGAAGGAGCGGCGGCCTCTTTCCTTGGAGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR GCA 90 bp CCTCCAGGGAGATGCTCTCGGCTGCCTTGCTACCCAGGGGTCGGCTCCGAGGAGAGAGAGGGAGCCAGCTaGCTCAGGGTTGCCTGTTGT +
Preference number: 4 (lower is better)
Translates to: PPGRCSRLPCYPGVGSEEREGAS*LRVACC
Trigger: ACAACAGGCAACCCTGAGGCAGCTGGCTCCCTCTCT...CTCCTCGGAGCCGACCCCTGGGTAGCAAGGCAGCCGAGAGCATCTCCCTGGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR CCA 90 bp GTGGGCCCCTCCAGGGAGATGCTCTCGGCTGCCTTGCTACCCAGGGGTCGGCTCCTCTTGTTGCACAGCTaGAAGGAGAGCACGTCGGTC +
Preference number: 4 (lower is better)
Translates to: VGPSREMLSAALLPRGRLLLLHS*KESTSV
Trigger: GACCGACGTGCTCTCCTTCCAGCTGTGCAACAAGAG...GAGCCGACCCCTGGGTAGCAAGGCAGCCGAGAGCATCTCCCTGGAGGGGCCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR CCA 90 bp GCCCTGTGGTCCCCCGTGCCTGGCTCGGGGAGGATCCTCAGGAATCAGGGACCCCTCTTGTTGCACAGCTaGAAGGAGAGCACGTCGGTC +
Preference number: 4 (lower is better)
Translates to: ALWSPVPGSGRILRNQGPLLLHS*KESTSV
Trigger: GACCGACGTGCTCTCCTTCCAGCTGTGCAACAAGAG...GGGTCCCTGATTCCTGAGGATCCTCCCCGAGCCAGGCACGGGGGACCACAGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR CCA 90 bp GTGGGCCCCTCCAGGGAGATGCTCTCGGCTGCCTTGCTACCCAGGGGTCGGCTCCCTTCTCCAGCTCACTaGTTGGGAACGAACACGTGC +
Preference number: 4 (lower is better)
Translates to: VGPSREMLSAALLPRGRLPSPAH*LGTNTC
Trigger: GCACGTGTTCGTTCCCAACCAGTGAGCTGGAGAAGG...GAGCCGACCCCTGGGTAGCAAGGCAGCCGAGAGCATCTCCCTGGAGGGGCCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR CCA 90 bp CTCATCACCCAGGGTGGCAGAAACGTCTCCCCCAGCAGTTGGGCTGCCCAGCAGGGGGGCCAAAGTGCATaGGCAGGTTGTGCTCCAGGG +
Preference number: 4 (lower is better)
Translates to: LITQGGRNVSPSSWAAQQGGQSA*AGCAPG
Trigger: CCCTGGAGCACAACCTGCCCATGCACTTTGGCCCCC...CTGCTGGGCAGCCCAACTGCTGGGGGAGACGTTTCTGCCACCCTGGGTGATGAG
64% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR CCA 90 bp CCCCGCCGCGAGATGGGTCTGCTGCTGCCTCATCTGAGTAGGTGTAAGAGGGGAAAGGACTGCCGTTGGTaGCCTGGGGGATGCGAGGGG +
Preference number: 4 (lower is better)
Translates to: PRREMGLLLPHLSRCKRGKDCRW*PGGCEG
Trigger: CCCCTCGCATCCCCCAGGCCACCAACGGCAGTCCTT...TCCCCTCTTACACCTACTCAGATGAGGCAGCAGCAGACCCATCTCGCGGCGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR CCA 90 bp ACAGCATCTTGGCCCTCACAGCTGTGGCAGTGCCTCTGCGGGCCATGGTCCCAGCAGAAGGACTGCCGTTaGTGGCCTGGGGGATGCGAG +
Preference number: 4 (lower is better)
Translates to: TASWPSQLWQCLCGPWSQQKDCR*WPGGCE
Trigger: CTCGCATCCCCCAGGCCACCAACGGCAGTCCTTCTG...CTGGGACCATGGCCCGCAGAGGCACTGCCACAGCTGTGAGGGCCAAGATGCTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR CCA 90 bp GTGGGCCCCTCCAGGGAGATGCTCTCGGCTGCCTTGCTACCCAGGGGTCGGCTCCATCTGAGAAGCCAATaGCAGCGAATGACGGTGCCC +
Preference number: 4 (lower is better)
Translates to: VGPSREMLSAALLPRGRLHLRSQ*QRMTVP
Trigger: GGGCACCGTCATTCGCTGCCATTGGCTTCTCAGATG...GAGCCGACCCCTGGGTAGCAAGGCAGCCGAGAGCATCTCCCTGGAGGGGCCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR CCA 90 bp CTTGGGTGGGCCAGGCCCTGCTTCAGGAGGTGGCGGGCCACTCCGGAGACTGATCCCAGAGATCCTCCCTaGGGAAGCACAGGGAGCATA +
Preference number: 4 (lower is better)
Translates to: LGWARPCFRRWRATPETDPRDPP*GSTGSI
Trigger: TATGCTCCCTGTGCTTCCCCAGGGAGGATCTCTGGG...ATCAGTCTCCGGAGTGGCCCGCCACCTCCTGAAGCAGGGCCTGGCCCACCCAAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR TCA 90 bp CACACGGGGCAGGGGTGGCACCCAGGGTCACCTGTCTCCCTAAGGAGGCCCACTTCAGGCTGCCGTTCCTaGGGAACGACCTGGTTTGTT +
Preference number: 4 (lower is better)
Translates to: HTGQGWHPGSPVSLRRPTSGCRS*GTTWFV
Trigger: AACAAACCAGGTCGTTCCTCAGGAACGGCAGCCTGA...AGTGGGCCTCCTTAGGGAGACAGGTGACCCTGGGTGCCACCCCTGCCCCGTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR TCA 90 bp ACCCTCCAAGGAAAGAGGCCGCCGCTCCTTCCCCACCAGCCCAGTGTGGCCAGACCAGAGAGAGCATCTTaGACACTCCTGGCAAGGGGC +
Preference number: 4 (lower is better)
Translates to: TLQGKRPPLLPHQPSVARPERAS*TLLARG
Trigger: GCCCCTTGCCAGGAGTGTTCAAGATGCTCTCTCTGG...TCTGGCCACACTGGGCTGGTGGGGAAGGAGCGGCGGCCTCTTTCCTTGGAGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR TCA 90 bp CTTGGGTGGGCCAGGCCCTGCTTCAGGAGGTGGCGGGCCACTCCGGAGACTGATTCACCTCTTCAGCTGTaGTGTCTACAGCCGCCCTCT +
Preference number: 4 (lower is better)
Translates to: LGWARPCFRRWRATPETDSPLQL*CLQPPS
Trigger: AGAGGGCGGCTGTAGACATCACAGCTGAAGAGGTGA...ATCAGTCTCCGGAGTGGCCCGCCACCTCCTGAAGCAGGGCCTGGCCCACCCAAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR TCA 90 bp CTCATCACCCAGGGTGGCAGAAACGTCTCCCCCAGCAGTTGGGCTGCCCAGCAGGGGTTGCCTGTTGTCTaGCCTGCTCTCTGGGCACTG +
Preference number: 4 (lower is better)
Translates to: LITQGGRNVSPSSWAAQQGLPVV*PALWAL
Trigger: CAGTGCCCAGAGAGCAGGTCAGACAACAGGCAACCC...CTGCTGGGCAGCCCAACTGCTGGGGGAGACGTTTCTGCCACCCTGGGTGATGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR GCA 90 bp CCTCCAGGGAGATGCTCTCGGCTGCCTTGCTACCCAGGGGTCGGCTCCGAGGAGGAACAAGTGAGCATCTaGGCACTGCGTCAGCTCCTC +
Preference number: 4 (lower is better)
Translates to: PPGRCSRLPCYPGVGSEEEQVSI*ALRQLL
Trigger: GAGGAGCTGACGCAGTGCGCAGATGCTCACTTGTTC...CTCCTCGGAGCCGACCCCTGGGTAGCAAGGCAGCCGAGAGCATCTCCCTGGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR GCA 90 bp CCTTCTCCAGCTCACTGGTTGGGAACGAACACGTGCAGCTGCCTTCCATGCAGCGGCTGTGGCAGGTTCTaGGGAACGGGCCTCGGGAGG +
Preference number: 4 (lower is better)
Translates to: PSPAHWLGTNTCSCLPCSGCGRF*GTGLGR
Trigger: CCTCCCGAGGCCCGTTCCGCAGAACCTGCCACAGCC...GCTGCATGGAAGGCAGCTGCACGTGTTCGTTCCCAACCAGTGAGCTGGAGAAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389900.8
CDS-3UTR GCA 90 bp GCTGGCTGGTCTGAAGACCCCCAGTGCTTCTCTCCCCAATGCTGTCACTGGTCCTGCTCTCGGCTGCCTTaGTACCCAGGGGTCGGCTCC +
Preference number: 4 (lower is better)
Translates to: AGWSEDPQCFSPQCCHWSCSRLP*YPGVGS
Trigger: GGAGCCGACCCCTGGGTAGCAAGGCAGCCGAGAGCA...GGACCAGTGACAGCATTGGGGAGAGAAGCACTGGGGGTCTTCAGACCAGCCAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR GCA 90 bp CCAGGAAGGCTTCAGACCTCTCATCTGTCAATGGGCCAGAGTGATGCCTCAGGCCCCCAGCAGTTGGGCTaGCCAGCAGGGCCACCAGGC +
Preference number: 4 (lower is better)
Translates to: PGRLQTSHLSMGQSDASGPQQLG*PAGPPG
Trigger: GCCTGGTGGCCCTGCTGGGCAGCCCAACTGCTGGGG...GCCTGAGGCATCACTCTGGCCCATTGACAGATGAGAGGTCTGAAGCCTTCCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR GCA 90 bp CTCATCACCCAGGGTGGCAGAAACGTCTCCCCCAGCAGTTGGGCTGCCCAGCAGCTGCCGCATGGAGCCTaGCTTTCCAAGGCACTGTCG +
Preference number: 4 (lower is better)
Translates to: LITQGGRNVSPSSWAAQQLPHGA*LSKALS
Trigger: CGACAGTGCCTTGGAAAGGCAGGCTCCATGCGGCAG...CTGCTGGGCAGCCCAACTGCTGGGGGAGACGTTTCTGCCACCCTGGGTGATGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR GCA 90 bp CCTCCAGGGAGATGCTCTCGGCTGCCTTGCTACCCAGGGGTCGGCTCCGAGGAGTGTTTCTGCAGCTGCTaGCTGCTCCCTTTGTCCTGC +
Preference number: 4 (lower is better)
Translates to: PPGRCSRLPCYPGVGSEECFCSC*LLPLSC
Trigger: GCAGGACAAAGGGAGCAGGCAGCAGCTGCAGAAACA...CTCCTCGGAGCCGACCCCTGGGTAGCAAGGCAGCCGAGAGCATCTCCCTGGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR GCA 90 bp ACCGAGGATGAGAAAGTTAGGCGGCAACAGAACAAAACCCCCGCCGCGAGATGGCCCTGTGGTCCCCCGTaGCTGGCTCGGGGAGGATCC +
Preference number: 4 (lower is better)
Translates to: TEDEKVRRQQNKTPAARWPCGPP*LARGGS
Trigger: GGATCCTCCCCGAGCCAGGCACGGGGGACCACAGGG...CCATCTCGCGGCGGGGGTTTTGTTCTGTTGCCGCCTAACTTTCTCATCCTCGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR GCA 90 bp ACCGAGGATGAGAAAGTTAGGCGGCAACAGAACAAAACCCCCGCCGCGAGATGGGGGAGCCTCACGCCCTaGGGCAAGCCCTGCAGGGCA +
Preference number: 4 (lower is better)
Translates to: TEDEKVRRQQNKTPAARWGSLTP*GKPCRA
Trigger: TGCCCTGCAGGGCTTGCCGCAGGGCGTGAGGCTCCC...CCATCTCGCGGCGGGGGTTTTGTTCTGTTGCCGCCTAACTTTCTCATCCTCGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR CCA 90 bp GTGGGCCCCTCCAGGGAGATGCTCTCGGCTGCCTTGCTACCCAGGGGTCGGCTCATGCTGCTGAGGAGCTaGGGTGACCAGCATTGGAAT +
Preference number: 4 (lower is better)
Translates to: VGPSREMLSAALLPRGRLMLLRS*GDQHWN
Trigger: ATTCCAATGCTGGTCACCCCAGCTCCTCAGCAGCAT...GAGCCGACCCCTGGGTAGCAAGGCAGCCGAGAGCATCTCCCTGGAGGGGCCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR CCA 90 bp ACAGCATCTTGGCCCTCACAGCTGTGGCAGTGCCTCTGCGGGCCATGGTCCCAGTGGCATCTGTGGCTGTaGCAGGTTCTGCGGAACGGG +
Preference number: 4 (lower is better)
Translates to: TASWPSQLWQCLCGPWSQWHLWL*QVLRNG
Trigger: CCCGTTCCGCAGAACCTGCCACAGCCACAGATGCCA...CTGGGACCATGGCCCGCAGAGGCACTGCCACAGCTGTGAGGGCCAAGATGCTGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR CCA 90 bp ACCCTCCAAGGAAAGAGGCCGCCGCTCCTTCCCCACCAGCCCAGTGTGGCCAGAATAGGGTGGCATCTGTaGCTGTGGCAGGTTCTGCGG +
Preference number: 4 (lower is better)
Translates to: TLQGKRPPLLPHQPSVARIGWHL*LWQVLR
Trigger: CCGCAGAACCTGCCACAGCCACAGATGCCACCCTAT...TCTGGCCACACTGGGCTGGTGGGGAAGGAGCGGCGGCCTCTTTCCTTGGAGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR CCA 90 bp ACTGTCCAACAGAGCCGGAAAGCTACAGGACGGGCACCTGACAAGCTCGTCGGCAAGCGATGCCGCGGCTaGGGGCCAAAGTGCATGGGC +
Preference number: 4 (lower is better)
Translates to: TVQQSRKATGRAPDKLVGKRCRG*GPKCMG
Trigger: GCCCATGCACTTTGGCCCCCAGCCGCGGCATCGCTT...GCCGACGAGCTTGTCAGGTGCCCGTCCTGTAGCTTTCCGGCTCTGTTGGACAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389900.8
CDS-3UTR CCA 90 bp CCAGGAAGGCTTCAGACCTCTCATCTGTCAATGGGCCAGAGTGATGCCTCAGGCAGCCCCCTCTGCCCTTaGCCCAACCGTGGGCCCCTC +
Preference number: 4 (lower is better)
Translates to: PGRLQTSHLSMGQSDASGSPLCP*PNRGPL
Trigger: GAGGGGCCCACGGTTGGGCCAAGGGCAGAGGGGGCT...GCCTGAGGCATCACTCTGGCCCATTGACAGATGAGAGGTCTGAAGCCTTCCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR CCA 90 bp ACAGCATCTTGGCCCTCACAGCTGTGGCAGTGCCTCTGCGGGCCATGGTCCCAGCGCAGCGGCCTGGCCTaGGAAAGGATTTCTCAGCCT +
Preference number: 4 (lower is better)
Translates to: TASWPSQLWQCLCGPWSQRSGLA*ERISQP
Trigger: AGGCTGAGAAATCCTTTCCCAGGCCAGGCCGCTGCG...CTGGGACCATGGCCCGCAGAGGCACTGCCACAGCTGTGAGGGCCAAGATGCTGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR CCA 90 bp CCTCCAGGGAGATGCTCTCGGCTGCCTTGCTACCCAGGGGTCGGCTCCGAGGAGCATCTGAGAAGCCAATaGCAGCGAATGACGGTGCCC +
Preference number: 4 (lower is better)
Translates to: PPGRCSRLPCYPGVGSEEHLRSQ*QRMTVP
Trigger: GGGCACCGTCATTCGCTGCCATTGGCTTCTCAGATG...CTCCTCGGAGCCGACCCCTGGGTAGCAAGGCAGCCGAGAGCATCTCCCTGGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR CCA 90 bp ACAGCATCTTGGCCCTCACAGCTGTGGCAGTGCCTCTGCGGGCCATGGTCCCAGTCCCTTTGTCCTGCCTaGGGCTCTTGCTGGAGCCAC +
Preference number: 4 (lower is better)
Translates to: TASWPSQLWQCLCGPWSQSLCPA*GSCWSH
Trigger: GTGGCTCCAGCAAGAGCCCCAGGCAGGACAAAGGGA...CTGGGACCATGGCCCGCAGAGGCACTGCCACAGCTGTGAGGGCCAAGATGCTGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR CCA 90 bp GAGGGGAGGGGCAGTTCACATCGCAGCTCTCTCCGAACTCCACCATTTGGGACGCGGCCCCTTGCTGGCTaGTCTGAAGACCCCCAGTGC +
Preference number: 4 (lower is better)
Translates to: EGRGSSHRSSLRTPPFGTRPLAG*SEDPQC
Trigger: GCACTGGGGGTCTTCAGACCAGCCAGCAAGGGGCCG...CGTCCCAAATGGTGGAGTTCGGAGAGAGCTGCGATGTGAACTGCCCCTCCCCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR CCA 90 bp GTGATGCCTGTGGCCAGGAAGGCTTCAGACCTCTCATCTGTCAATGGGCCAGAGAGAGGGGGCTGTGGCTaGGGAGCCTCACGCCCTGCG +
Preference number: 4 (lower is better)
Translates to: VMPVARKASDLSSVNGPERGGCG*GASRPA
Trigger: CGCAGGGCGTGAGGCTCCCCAGCCACAGCCCCCTCT...CTCTGGCCCATTGACAGATGAGAGGTCTGAAGCCTTCCTGGCCACAGGCATCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR TCA 90 bp ACCCTCCAAGGAAAGAGGCCGCCGCTCCTTCCCCACCAGCCCAGTGTGGCCAGAGCTGAGGAGCTGGGGTaGCCAGCATTGGAATCCTTT +
Preference number: 4 (lower is better)
Translates to: TLQGKRPPLLPHQPSVARAEELG*PALESF
Trigger: AAAGGATTCCAATGCTGGTCACCCCAGCTCCTCAGC...TCTGGCCACACTGGGCTGGTGGGGAAGGAGCGGCGGCCTCTTTCCTTGGAGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR TCA 90 bp ACAGCATCTTGGCCCTCACAGCTGTGGCAGTGCCTCTGCGGGCCATGGTCCCAGTCTTCTTCATGCTGCTaGGGAGCTGGGGTGACCAGC +
Preference number: 4 (lower is better)
Translates to: TASWPSQLWQCLCGPWSQSSSCC*GAGVTS
Trigger: GCTGGTCACCCCAGCTCCTCAGCAGCATGAAGAAGA...CTGGGACCATGGCCCGCAGAGGCACTGCCACAGCTGTGAGGGCCAAGATGCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR TCA 90 bp CTTGGGTGGGCCAGGCCCTGCTTCAGGAGGTGGCGGGCCACTCCGGAGACTGATTTTGCTGCTTGGTTATaGCTCGGTCCAGGCTTGGGT +
Preference number: 4 (lower is better)
Translates to: LGWARPCFRRWRATPETDFAAWL*LGPGLG
Trigger: ACCCAAGCCTGGACCGAGTCATAACCAAGCAGCAAA...ATCAGTCTCCGGAGTGGCCCGCCACCTCCTGAAGCAGGGCCTGGCCCACCCAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR TCA 90 bp GCTGGCTGGTCTGAAGACCCCCAGTGCTTCTCTCCCCAATGCTGTCACTGGTCCTACAGGACGGGCACCTaGCAAGCTCGTCGGCGTAGG +
Preference number: 4 (lower is better)
Translates to: AGWSEDPQCFSPQCCHWSYRTGT*QARRRR
Trigger: CCTACGCCGACGAGCTTGTCAGGTGCCCGTCCTGTA...GGACCAGTGACAGCATTGGGGAGAGAAGCACTGGGGGTCTTCAGACCAGCCAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR TCA 90 bp GCTGGCTGGTCTGAAGACCCCCAGTGCTTCTCTCCCCAATGCTGTCACTGGTCCGCAAGGGGCTCCTGGTaGGCGGGGATGTTGGCAGAA +
Preference number: 4 (lower is better)
Translates to: AGWSEDPQCFSPQCCHWSARGSW*AGMLAE
Trigger: TTCTGCCAACATCCCCGCTCACCAGGAGCCCCTTGC...GGACCAGTGACAGCATTGGGGAGAGAAGCACTGGGGGTCTTCAGACCAGCCAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR TCA 90 bp AGGCTTCAGACCTCTCATCTGTCAATGGGCCAGAGTGATGCCTCAGGCACCGCTGCCAATGGCAGCGAATaGCGGTGCCCGCCTGCCCCA +
Preference number: 4 (lower is better)
Translates to: RLQTSHLSMGQSDASGTAANGSE*RCPPAP
Trigger: TGGGGCAGGCGGGCACCGTCATTCGCTGCCATTGGC...AGCGGTGCCTGAGGCATCACTCTGGCCCATTGACAGATGAGAGGTCTGAAGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR TCA 90 bp ACCCTCCAAGGAAAGAGGCCGCCGCTCCTTCCCCACCAGCCCAGTGTGGCCAGATCACCTCTTCAGCTGTaGTGTCTACAGCCGCCCTCT +
Preference number: 4 (lower is better)
Translates to: TLQGKRPPLLPHQPSVARSPLQL*CLQPPS
Trigger: AGAGGGCGGCTGTAGACATCACAGCTGAAGAGGTGA...TCTGGCCACACTGGGCTGGTGGGGAAGGAGCGGCGGCCTCTTTCCTTGGAGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR GCA 90 bp ACCGAGGATGAGAAAGTTAGGCGGCAACAGAACAAAACCCCCGCCGCGAGATGGCTCGTCGGCGTAGGCTaGCGCAACCTCCTCCTCGGC +
Preference number: 4 (lower is better)
Translates to: TEDEKVRRQQNKTPAARWLVGVG*RNLLLG
Trigger: GCCGAGGAGGAGGTTGCGGCAGCCTACGCCGACGAG...CCATCTCGCGGCGGGGGTTTTGTTCTGTTGCCGCCTAACTTTCTCATCCTCGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR GCA 90 bp CCTCCAGGGAGATGCTCTCGGCTGCCTTGCTACCCAGGGGTCGGCTCCGAGGAGCACAGCGGCAAGACATaGGGTTGCAGCCTTCAGATT +
Preference number: 4 (lower is better)
Translates to: PPGRCSRLPCYPGVGSEEHSGKT*GCSLQI
Trigger: AATCTGAAGGCTGCAACCGCATGTCTTGCCGCTGTG...CTCCTCGGAGCCGACCCCTGGGTAGCAAGGCAGCCGAGAGCATCTCCCTGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR GCA 90 bp AGGCTTCAGACCTCTCATCTGTCAATGGGCCAGAGTGATGCCTCAGGCACCGCTGGCTGTGGCAGGTTCTaGGGAACGGGCCTCGGGAGG +
Preference number: 4 (lower is better)
Translates to: RLQTSHLSMGQSDASGTAGCGRF*GTGLGR
Trigger: CCTCCCGAGGCCCGTTCCGCAGAACCTGCCACAGCC...AGCGGTGCCTGAGGCATCACTCTGGCCCATTGACAGATGAGAGGTCTGAAGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR GCA 90 bp GTGATGCCTGTGGCCAGGAAGGCTTCAGACCTCTCATCTGTCAATGGGCCAGAGAGGTGCAGCCCCCTCTaGCCTTGGCCCAACCGTGGG +
Preference number: 4 (lower is better)
Translates to: VMPVARKASDLSSVNGPERCSPL*PWPNRG
Trigger: CCCACGGTTGGGCCAAGGGCAGAGGGGGCTGCACCT...CTCTGGCCCATTGACAGATGAGAGGTCTGAAGCCTTCCTGGCCACAGGCATCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR GCA 90 bp CTCATCACCCAGGGTGGCAGAAACGTCTCCCCCAGCAGTTGGGCTGCCCAGCAGGCCCTCAACACTCACTaGAGTGGCGCACGGGTTTTG +
Preference number: 4 (lower is better)
Translates to: LITQGGRNVSPSSWAAQQALNTH*SGARVL
Trigger: CAAAACCCGTGCGCCACTGCAGTGAGTGTTGAGGGC...CTGCTGGGCAGCCCAACTGCTGGGGGAGACGTTTCTGCCACCCTGGGTGATGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR GCA 90 bp TCTCCATCCACACTCCTACCCCAAACGGGCTTTGTGCTGCTCAATGGGGATTCGCCCCAGCAGTTGGGCTaGCCAGCAGGGCCACCAGGC +
Preference number: 4 (lower is better)
Translates to: SPSTLLPQTGFVLLNGDSPQQLG*PAGPPG
Trigger: GCCTGGTGGCCCTGCTGGGCAGCCCAACTGCTGGGG...CGAATCCCCATTGAGCAGCACAAAGCCCGTTTGGGGTAGGAGTGTGGATGGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR GCA 90 bp CCTACCCTTCAAGCTGACTTAGGATGCAATGGTACAGACACCAGCCTTGGGGGAGGGTGGGCCAGGCCCTaGTTCAGGAGGTGGCGGGCC +
Preference number: 4 (lower is better)
Translates to: PTLQADLGCNGTDTSLGGGWARP*FRRWRA
Trigger: GGCCCGCCACCTCCTGAAGCAGGGCCTGGCCCACCC...TCCCCCAAGGCTGGTGTCTGTACCATTGCATCCTAAGTCAGCTTGAAGGGTAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR GCA 90 bp ACAGCATCTTGGCCCTCACAGCTGTGGCAGTGCCTCTGCGGGCCATGGTCCCAGCGAAGACAATCCTGTTaGTGCCGCATGGAGCCTGCC +
Preference number: 4 (lower is better)
Translates to: TASWPSQLWQCLCGPWSQRRQSC*CRMEPA
Trigger: GGCAGGCTCCATGCGGCAGCAACAGGATTGTCTTCG...CTGGGACCATGGCCCGCAGAGGCACTGCCACAGCTGTGAGGGCCAAGATGCTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR GCA 90 bp CCTCCAGGGAGATGCTCTCGGCTGCCTTGCTACCCAGGGGTCGGCTCCGAGGAGTCTGAAGACCCCCAGTaGTTCTCTCCCCAATGCTGT +
Preference number: 4 (lower is better)
Translates to: PPGRCSRLPCYPGVGSEESEDPQ*FSPQCC
Trigger: ACAGCATTGGGGAGAGAAGCACTGGGGGTCTTCAGA...CTCCTCGGAGCCGACCCCTGGGTAGCAAGGCAGCCGAGAGCATCTCCCTGGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR CCA 90 bp GAGGGGAGGGGCAGTTCACATCGCAGCTCTCTCCGAACTCCACCATTTGGGACGCTGGGGTTCCGGCCTTaGAAAAGCGGGCCCTGGGAA +
Preference number: 4 (lower is better)
Translates to: EGRGSSHRSSLRTPPFGTLGFRP*KSGPWE
Trigger: TTCCCAGGGCCCGCTTTTCCAAGGCCGGAACCCCAG...CGTCCCAAATGGTGGAGTTCGGAGAGAGCTGCGATGTGAACTGCCCCTCCCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR CCA 90 bp CACACGGGGCAGGGGTGGCACCCAGGGTCACCTGTCTCCCTAAGGAGGCCCACTGAAATCCCACCTTGCTaGGGTTCCGGCCTTGGAAAA +
Preference number: 4 (lower is better)
Translates to: HTGQGWHPGSPVSLRRPTEIPPC*GSGLGK
Trigger: TTTTCCAAGGCCGGAACCCCAGCAAGGTGGGATTTC...AGTGGGCCTCCTTAGGGAGACAGGTGACCCTGGGTGCCACCCCTGCCCCGTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR CCA 90 bp GCCCTGTGGTCCCCCGTGCCTGGCTCGGGGAGGATCCTCAGGAATCAGGGACCCGGTGAGCGGGGATGTTaGCAGAAATGGTCATATCCA +
Preference number: 4 (lower is better)
Translates to: ALWSPVPGSGRILRNQGPGERGC*QKWSYP
Trigger: TGGATATGACCATTTCTGCCAACATCCCCGCTCACC...GGGTCCCTGATTCCTGAGGATCCTCCCCGAGCCAGGCACGGGGGACCACAGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR CCA 90 bp GCTCGTCGGCGTAGGCTGCCGCAACCTCCTCCTCGGCTTTTCGCTCATAGTACTGGGCACGTACGGGGCTaGGATAGGCCCCATGTTGAG +
Preference number: 4 (lower is better)
Translates to: ARRRRLPQPPPRLFAHSTGHVRG*DRPHVE
Trigger: CTCAACATGGGGCCTATCCCAGCCCCGTACGTGCCC...AGTACTATGAGCGAAAAGCCGAGGAGGAGGTTGCGGCAGCCTACGCCGACGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000389900.8
CDS-3UTR CCA 90 bp GGGTTCTCCATCCACACTCCTACCCCAAACGGGCTTTGTGCTGCTCAATGGGGACCCTTGGCCCAACCGTaGGCCCCTCCAGGGAGATGC +
Preference number: 4 (lower is better)
Translates to: GFSIHTPTPNGLCAAQWGPLAQP*APPGRC
Trigger: GCATCTCCCTGGAGGGGCCCACGGTTGGGCCAAGGG...TCCCCATTGAGCAGCACAAAGCCCGTTTGGGGTAGGAGTGTGGATGGAGAACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR CCA 90 bp ATGCAGCCCCACCCCAATGGTTGTCGGACTCAGCTGTGTCTGAGGTCTGTGAACGTCTCCCCCAGCAGTTaGGCTGCCCAGCAGGGCCAC +
Preference number: 4 (lower is better)
Translates to: MQPHPNGCRTQLCLRSVNVSPSS*AAQQGH
Trigger: GTGGCCCTGCTGGGCAGCCCAACTGCTGGGGGAGAC...GTTCACAGACCTCAGACACAGCTGAGTCCGACAACCATTGGGGTGGGGCTGCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR CCA 90 bp CCAGGAAGGCTTCAGACCTCTCATCTGTCAATGGGCCAGAGTGATGCCTCAGGCCACACGGGGCAGGGGTaGCACCCAGGGTCACCTGTC +
Preference number: 4 (lower is better)
Translates to: PGRLQTSHLSMGQSDASGHTGQG*HPGSPV
Trigger: GACAGGTGACCCTGGGTGCCACCCCTGCCCCGTGTG...GCCTGAGGCATCACTCTGGCCCATTGACAGATGAGAGGTCTGAAGCCTTCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR CCA 90 bp GAAACCCAGGGCCGGACAGGAGGCGAGGAGGGTGAGTGGGGACATGGCAGGGCTGAAGTGACCTTCACATaGGGGATACTGGACAGCACC +
Preference number: 4 (lower is better)
Translates to: ETQGRTGGEEGEWGHGRAEVTFT*GILDST
Trigger: GGTGCTGTCCAGTATCCCCCATGTGAAGGTCACTTC...AGCCCTGCCATGTCCCCACTCACCCTCCTCGCCTCCTGTCCGGCCCTGGGTTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR CCA 90 bp CCTCCAGGGAGATGCTCTCGGCTGCCTTGCTACCCAGGGGTCGGCTCCGAGGAGCCTCTCAGAACCCCATaGCAACACGACAAGGACAAG +
Preference number: 4 (lower is better)
Translates to: PPGRCSRLPCYPGVGSEEPLRTP*QHDKDK
Trigger: CTTGTCCTTGTCGTGTTGCCATGGGGTTCTGAGAGG...CTCCTCGGAGCCGACCCCTGGGTAGCAAGGCAGCCGAGAGCATCTCCCTGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR CCA 90 bp CCTCCAGGGAGATGCTCTCGGCTGCCTTGCTACCCAGGGGTCGGCTCCGAGGAGCAAATGACCCACCCCTaGGGTTTGGCCTTAGGAGAA +
Preference number: 4 (lower is better)
Translates to: PPGRCSRLPCYPGVGSEEQMTHP*GLALGE
Trigger: TTCTCCTAAGGCCAAACCCCAGGGGTGGGTCATTTG...CTCCTCGGAGCCGACCCCTGGGTAGCAAGGCAGCCGAGAGCATCTCCCTGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR TCA 90 bp CCTCCAGGGAGATGCTCTCGGCTGCCTTGCTACCCAGGGGTCGGCTCCGAGGAGTCTTCTTCGATGGCCTaGTCATCTGCTAGAGCAGCT +
Preference number: 4 (lower is better)
Translates to: PPGRCSRLPCYPGVGSEESSSMA*SSARAA
Trigger: AGCTGCTCTAGCAGATGATCAGGCCATCGAAGAAGA...CTCCTCGGAGCCGACCCCTGGGTAGCAAGGCAGCCGAGAGCATCTCCCTGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR TCA 90 bp CTCATCACCCAGGGTGGCAGAAACGTCTCCCCCAGCAGTTGGGCTGCCCAGCAGTGCTGCTGCCTCATCTaGGTAGGTGTAAGAGGGGAG +
Preference number: 4 (lower is better)
Translates to: LITQGGRNVSPSSWAAQQCCCLI*VGVRGE
Trigger: CTCCCCTCTTACACCTACTCAGATGAGGCAGCAGCA...CTGCTGGGCAGCCCAACTGCTGGGGGAGACGTTTCTGCCACCCTGGGTGATGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR TCA 90 bp GTGATGCCTGTGGCCAGGAAGGCTTCAGACCTCTCATCTGTCAATGGGCCAGAGGGCCACTCCGGAGACTaGTGCAGCCCCACCCCAATG +
Preference number: 4 (lower is better)
Translates to: VMPVARKASDLSSVNGPEGHSGD*CSPTPM
Trigger: CATTGGGGTGGGGCTGCATCAGTCTCCGGAGTGGCC...CTCTGGCCCATTGACAGATGAGAGGTCTGAAGCCTTCCTGGCCACAGGCATCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR TCA 90 bp GTGATGCCTGTGGCCAGGAAGGCTTCAGACCTCTCATCTGTCAATGGGCCAGAGCTCCCCTGCCAGGGTTaGGGCCAGCACCTGTCTAGG +
Preference number: 4 (lower is better)
Translates to: VMPVARKASDLSSVNGPELPCQG*GQHLSR
Trigger: CCTAGACAGGTGCTGGCCTCAACCCTGGCAGGGGAG...CTCTGGCCCATTGACAGATGAGAGGTCTGAAGCCTTCCTGGCCACAGGCATCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR GCA 90 bp GCTGGCTGGTCTGAAGACCCCCAGTGCTTCTCTCCCCAATGCTGTCACTGGTCCCAAGCGGCCCAGTTCTaGTTCAGGCTGCCGTTCCTG +
Preference number: 4 (lower is better)
Translates to: AGWSEDPQCFSPQCCHWSQAAQF*FRLPFL
Trigger: CAGGAACGGCAGCCTGAAGCAGAACTGGGCCGCTTG...GGACCAGTGACAGCATTGGGGAGAGAAGCACTGGGGGTCTTCAGACCAGCCAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR GCA 90 bp CCTCCAGGGAGATGCTCTCGGCTGCCTTGCTACCCAGGGGTCGGCTCCGAGGAGAACTCCTGCTCTTGTTaGACAGCTGGAAGGAGAGCA +
Preference number: 4 (lower is better)
Translates to: PPGRCSRLPCYPGVGSEENSCSC*TAGRRA
Trigger: TGCTCTCCTTCCAGCTGTGCAACAAGAGCAGGAGTT...CTCCTCGGAGCCGACCCCTGGGTAGCAAGGCAGCCGAGAGCATCTCCCTGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR GCA 90 bp ATGCAGCCCCACCCCAATGGTTGTCGGACTCAGCTGTGTCTGAGGTCTGTGAACGGCCATCAGAAGCGATaGCGCGGCTGGGGGCCAAAG +
Preference number: 4 (lower is better)
Translates to: MQPHPNGCRTQLCLRSVNGHQKR*RGWGPK
Trigger: CTTTGGCCCCCAGCCGCGGCATCGCTTCTGATGGCC...GTTCACAGACCTCAGACACAGCTGAGTCCGACAACCATTGGGGTGGGGCTGCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR GCA 90 bp GAGGGGAGGGGCAGTTCACATCGCAGCTCTCTCCGAACTCCACCATTTGGGACGACAAGGCAGAAGGACTaGCGTTGGTGGCCTGGGGGA +
Preference number: 4 (lower is better)
Translates to: EGRGSSHRSSLRTPPFGTTRQKD*RWWPGG
Trigger: TCCCCCAGGCCACCAACGGCAGTCCTTCTGCCTTGT...CGTCCCAAATGGTGGAGTTCGGAGAGAGCTGCGATGTGAACTGCCCCTCCCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR GCA 90 bp GTGATGCCTGTGGCCAGGAAGGCTTCAGACCTCTCATCTGTCAATGGGCCAGAGCCCCACCCTGAGCAATaGTTCCCAGGCCCGCAGGTG +
Preference number: 4 (lower is better)
Translates to: VMPVARKASDLSSVNGPEPHPEQ*FPGPQV
Trigger: CACCTGCGGGCCTGGGAAGCATTGCTCAGGGTGGGG...CTCTGGCCCATTGACAGATGAGAGGTCTGAAGCCTTCCTGGCCACAGGCATCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR GCA 90 bp GTGGGCCCCTCCAGGGAGATGCTCTCGGCTGCCTTGCTACCCAGGGGTCGGCTCGAGTTTTGCTTTTGTTaGTCAGGCTGGAGTGCAGTG +
Preference number: 4 (lower is better)
Translates to: VGPSREMLSAALLPRGRLEFCFC*SGWSAV
Trigger: CACTGCACTCCAGCCTGAGCAACAAAAGCAAAACTC...GAGCCGACCCCTGGGTAGCAAGGCAGCCGAGAGCATCTCCCTGGAGGGGCCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR GCA 90 bp CCCCGCCGCGAGATGGGTCTGCTGCTGCCTCATCTGAGTAGGTGTAAGAGGGGACGAAGACAATCCTGTTaGTGCCGCATGGAGCCTGCC +
Preference number: 4 (lower is better)
Translates to: PRREMGLLLPHLSRCKRGRRQSC*CRMEPA
Trigger: GGCAGGCTCCATGCGGCAGCAACAGGATTGTCTTCG...TCCCCTCTTACACCTACTCAGATGAGGCAGCAGCAGACCCATCTCGCGGCGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR GCA 90 bp CCAGGAAGGCTTCAGACCTCTCATCTGTCAATGGGCCAGAGTGATGCCTCAGGCCCTGCCTGGGGCTCTTaGTGGAGCCACGTGCCTAGG +
Preference number: 4 (lower is better)
Translates to: PGRLQTSHLSMGQSDASGPAWGS*WSHVPR
Trigger: CCTAGGCACGTGGCTCCAGCAAGAGCCCCAGGCAGG...GCCTGAGGCATCACTCTGGCCCATTGACAGATGAGAGGTCTGAAGCCTTCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR GCA 90 bp AGGCTTCAGACCTCTCATCTGTCAATGGGCCAGAGTGATGCCTCAGGCACCGCTCCTGCCTGGGGCTCTTaGTGGAGCCACGTGCCTAGG +
Preference number: 4 (lower is better)
Translates to: RLQTSHLSMGQSDASGTAPAWGS*WSHVPR
Trigger: CCTAGGCACGTGGCTCCAGCAAGAGCCCCAGGCAGG...AGCGGTGCCTGAGGCATCACTCTGGCCCATTGACAGATGAGAGGTCTGAAGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR CCA 90 bp CTTGGGTGGGCCAGGCCCTGCTTCAGGAGGTGGCGGGCCACTCCGGAGACTGATTGGAAAGGCTGGACCTaGCTCTTCATCATCACTTGC +
Preference number: 4 (lower is better)
Translates to: LGWARPCFRRWRATPETDWKGWT*LFIITC
Trigger: GCAAGTGATGATGAAGAGCCAGGTCCAGCCTTTCCA...ATCAGTCTCCGGAGTGGCCCGCCACCTCCTGAAGCAGGGCCTGGCCCACCCAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR CCA 90 bp GTGGGCCCCTCCAGGGAGATGCTCTCGGCTGCCTTGCTACCCAGGGGTCGGCTCAGTACTTATACAGGATaGTCTGGGGGAGCACCTTCT +
Preference number: 4 (lower is better)
Translates to: VGPSREMLSAALLPRGRLSTYTG*SGGAPS
Trigger: AGAAGGTGCTCCCCCAGACCATCCTGTATAAGTACT...GAGCCGACCCCTGGGTAGCAAGGCAGCCGAGAGCATCTCCCTGGAGGGGCCCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR CCA 90 bp CCTCCAGGGAGATGCTCTCGGCTGCCTTGCTACCCAGGGGTCGGCTCCGAGGAGCCAGTCCCACACTTGTaGCATTTTCTAATGCGGGCA +
Preference number: 4 (lower is better)
Translates to: PPGRCSRLPCYPGVGSEEPVPHL*HFLMRA
Trigger: TGCCCGCATTAGAAAATGCCACAAGTGTGGGACTGG...CTCCTCGGAGCCGACCCCTGGGTAGCAAGGCAGCCGAGAGCATCTCCCTGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR CCA 90 bp TCTCTCCCCAATGCTGTCACTGGTCCAGGCAGGAGCCCGAGGTTCAGGCCCTGCCATCTTGAACACTCCTaGCAAGGGGCTCCTGGTGAG +
Preference number: 4 (lower is better)
Translates to: SLPNAVTGPGRSPRFRPCHLEHS*QGAPGE
Trigger: CTCACCAGGAGCCCCTTGCCAGGAGTGTTCAAGATG...GCAGGGCCTGAACCTCGGGCTCCTGCCTGGACCAGTGACAGCATTGGGGAGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR CCA 90 bp CTTGGGTGGGCCAGGCCCTGCTTCAGGAGGTGGCGGGCCACTCCGGAGACTGATTCTCATCATCTTCAGTaGGATCGGTCCAGAGAGAGC +
Preference number: 4 (lower is better)
Translates to: LGWARPCFRRWRATPETDSHHLQ*DRSRES
Trigger: GCTCTCTCTGGACCGATCCCACTGAAGATGATGAGA...ATCAGTCTCCGGAGTGGCCCGCCACCTCCTGAAGCAGGGCCTGGCCCACCCAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR CCA 90 bp ATGCAGCCCCACCCCAATGGTTGTCGGACTCAGCTGTGTCTGAGGTCTGTGAACAAGCGATGCCGCGGCTaGGGGCCAAAGTGCATGGGC +
Preference number: 4 (lower is better)
Translates to: MQPHPNGCRTQLCLRSVNKRCRG*GPKCMG
Trigger: GCCCATGCACTTTGGCCCCCAGCCGCGGCATCGCTT...GTTCACAGACCTCAGACACAGCTGAGTCCGACAACCATTGGGGTGGGGCTGCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR CCA 90 bp GAAACCCAGGGCCGGACAGGAGGCGAGGAGGGTGAGTGGGGACATGGCAGGGCTCTTCTAGGAAAGGGGTaGGAAGAAAACCAGCCTACC +
Preference number: 4 (lower is better)
Translates to: ETQGRTGGEEGEWGHGRALLGKG*EENQPT
Trigger: GGTAGGCTGGTTTTCTTCCCACCCCTTTCCTAGAAG...AGCCCTGCCATGTCCCCACTCACCCTCCTCGCCTCCTGTCCGGCCCTGGGTTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR CCA 90 bp AGGCTTCAGACCTCTCATCTGTCAATGGGCCAGAGTGATGCCTCAGGCACCGCTTGGCCCTCACAGCTGTaGCAGTGCCTCTGCGGGCCA +
Preference number: 4 (lower is better)
Translates to: RLQTSHLSMGQSDASGTAWPSQL*QCLCGP
Trigger: TGGCCCGCAGAGGCACTGCCACAGCTGTGAGGGCCA...AGCGGTGCCTGAGGCATCACTCTGGCCCATTGACAGATGAGAGGTCTGAAGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR CCA 90 bp CTCATCACCCAGGGTGGCAGAAACGTCTCCCCCAGCAGTTGGGCTGCCCAGCAGCAACACTCACTGCAGTaGCGCACGGGTTTTGGATGG +
Preference number: 4 (lower is better)
Translates to: LITQGGRNVSPSSWAAQQQHSLQ*RTGFGW
Trigger: CCATCCAAAACCCGTGCGCCACTGCAGTGAGTGTTG...CTGCTGGGCAGCCCAACTGCTGGGGGAGACGTTTCTGCCACCCTGGGTGATGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR CCA 90 bp ACCGAGGATGAGAAAGTTAGGCGGCAACAGAACAAAACCCCCGCCGCGAGATGGACCCCCGCCGCGAGATaGGTCTGCTGCTGCCTCATC +
Preference number: 4 (lower is better)
Translates to: TEDEKVRRQQNKTPAARWTPAAR*VCCCLI
Trigger: GATGAGGCAGCAGCAGACCCATCTCGCGGCGGGGGT...CCATCTCGCGGCGGGGGTTTTGTTCTGTTGCCGCCTAACTTTCTCATCCTCGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR CCA 90 bp GTGGGCCCCTCCAGGGAGATGCTCTCGGCTGCCTTGCTACCCAGGGGTCGGCTCAAGAGGCTCTTTCAATaGGCCAGCTTCAGAACCATC +
Preference number: 4 (lower is better)
Translates to: VGPSREMLSAALLPRGRLKRLFQ*ASFRTI
Trigger: GATGGTTCTGAAGCTGGCCCATTGAAAGAGCCTCTT...GAGCCGACCCCTGGGTAGCAAGGCAGCCGAGAGCATCTCCCTGGAGGGGCCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR CCA 90 bp GTGTCTGAGGTCTGTGAACTCCCAGCCTCTCAGAACCCCATGGCAACACGACAACACACGGGGCAGGGGTaGCACCCAGGGTCACCTGTC +
Preference number: 4 (lower is better)
Translates to: VSEVCELPASQNPMATRQHTGQG*HPGSPV
Trigger: GACAGGTGACCCTGGGTGCCACCCCTGCCCCGTGTG...TTGTCGTGTTGCCATGGGGTTCTGAGAGGCTGGGAGTTCACAGACCTCAGACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR CCA 90 bp GGGTTCTCCATCCACACTCCTACCCCAAACGGGCTTTGTGCTGCTCAATGGGGACCCTGCTTCAGGAGGTaGCGGGCCACTCCGGAGACT +
Preference number: 4 (lower is better)
Translates to: GFSIHTPTPNGLCAAQWGPCFRR*RATPET
Trigger: AGTCTCCGGAGTGGCCCGCCACCTCCTGAAGCAGGG...TCCCCATTGAGCAGCACAAAGCCCGTTTGGGGTAGGAGTGTGGATGGAGAACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR CCA 90 bp TCTCCATCCACACTCCTACCCCAAACGGGCTTTGTGCTGCTCAATGGGGATTCGGTGGTCCCCCGTGCCTaGCTCGGGGAGGATCCTCAG +
Preference number: 4 (lower is better)
Translates to: SPSTLLPQTGFVLLNGDSVVPRA*LGEDPQ
Trigger: CTGAGGATCCTCCCCGAGCCAGGCACGGGGGACCAC...CGAATCCCCATTGAGCAGCACAAAGCCCGTTTGGGGTAGGAGTGTGGATGGAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR CCA 90 bp ACCGAGGATGAGAAAGTTAGGCGGCAACAGAACAAAACCCCCGCCGCGAGATGGCCTGGAGAACCAGGGTaGGTGCTCACGGCAGCCCTG +
Preference number: 4 (lower is better)
Translates to: TEDEKVRRQQNKTPAARWPGEPG*VLTAAL
Trigger: CAGGGCTGCCGTGAGCACCCACCCTGGTTCTCCAGG...CCATCTCGCGGCGGGGGTTTTGTTCTGTTGCCGCCTAACTTTCTCATCCTCGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR TCA 90 bp TCTCTCCCCAATGCTGTCACTGGTCCAGGCAGGAGCCCGAGGTTCAGGCCCTGCAGGAGTCAGATATGGTaGTGGGCCCATCTCGGAGAT +
Preference number: 4 (lower is better)
Translates to: SLPNAVTGPGRSPRFRPCRSQIW*WAHLGD
Trigger: ATCTCCGAGATGGGCCCATCACCATATCTGACTCCT...GCAGGGCCTGAACCTCGGGCTCCTGCCTGGACCAGTGACAGCATTGGGGAGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR TCA 90 bp GAAACCCAGGGCCGGACAGGAGGCGAGGAGGGTGAGTGGGGACATGGCAGGGCTCATCTTCTGTCAGGATaGCATCATCATCCAGGTCCT +
Preference number: 4 (lower is better)
Translates to: ETQGRTGGEEGEWGHGRAHLLSG*HHHPGP
Trigger: AGGACCTGGATGATGATGTCATCCTGACAGAAGATG...AGCCCTGCCATGTCCCCACTCACCCTCCTCGCCTCCTGTCCGGCCCTGGGTTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425013.6
CDS-3UTR TCA 90 bp CCTCCAGGGAGATGCTCTCGGCTGCCTTGCTACCCAGGGGTCGGCTCCGAGGAGGATGACTTTCTGCTCTaGTCTGGGGTTGACAATGTC +
Preference number: 4 (lower is better)
Translates to: PPGRCSRLPCYPGVGSEEDDFLL*SGVDNV
Trigger: GACATTGTCAACCCCAGATCAGAGCAGAAAGTCATC...CTCCTCGGAGCCGACCCCTGGGTAGCAAGGCAGCCGAGAGCATCTCCCTGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR TCA 90 bp CCCTTTGTCCTGCCTGGGGCTCTTGCTGGAGCCACGTGCCTAGGGTACAGGGCATCTTTGCAGAACAAGTaGGCATCTGCGCACTGCGTC +
Preference number: 4 (lower is better)
Translates to: PFVLPGALAGATCLGYRASLQNK*ASAHCV
Trigger: GACGCAGTGCGCAGATGCTCACTTGTTCTGCAAAGA...TGCCCTGTACCCTAGGCACGTGGCTCCAGCAAGAGCCCCAGGCAGGACAAAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR TCA 90 bp ACAGCATCTTGGCCCTCACAGCTGTGGCAGTGCCTCTGCGGGCCATGGTCCCAGGAGCTGATGCTCAGCTaGCTCCATGAGAAGGGAAGT +
Preference number: 4 (lower is better)
Translates to: TASWPSQLWQCLCGPWSQELMLS*LHEKGS
Trigger: ACTTCCCTTCTCATGGAGTCAGCTGAGCATCAGCTC...CTGGGACCATGGCCCGCAGAGGCACTGCCACAGCTGTGAGGGCCAAGATGCTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR TCA 90 bp GTGATGCCTGTGGCCAGGAAGGCTTCAGACCTCTCATCTGTCAATGGGCCAGAGGAGGCTCCCAGGGCCTaGGGTCACCTCTTCAGCTGT +
Preference number: 4 (lower is better)
Translates to: VMPVARKASDLSSVNGPEEAPRA*GHLFSC
Trigger: ACAGCTGAAGAGGTGACCTCAGGCCCTGGGAGCCTC...CTCTGGCCCATTGACAGATGAGAGGTCTGAAGCCTTCCTGGCCACAGGCATCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR GCA 90 bp ACCCTCCAAGGAAAGAGGCCGCCGCTCCTTCCCCACCAGCCCAGTGTGGCCAGAAACTCCTGCTCTTGTTaGACAGCTGGAAGGAGAGCA +
Preference number: 4 (lower is better)
Translates to: TLQGKRPPLLPHQPSVARNSCSC*TAGRRA
Trigger: TGCTCTCCTTCCAGCTGTGCAACAAGAGCAGGAGTT...TCTGGCCACACTGGGCTGGTGGGGAAGGAGCGGCGGCCTCTTTCCTTGGAGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR GCA 90 bp CCAGGAAGGCTTCAGACCTCTCATCTGTCAATGGGCCAGAGTGATGCCTCAGGCGGCTGGGGGCCAAAGTaGATGGGCAGGTTGTGCTCC +
Preference number: 4 (lower is better)
Translates to: PGRLQTSHLSMGQSDASGGWGPK*MGRLCS
Trigger: GGAGCACAACCTGCCCATGCACTTTGGCCCCCAGCC...GCCTGAGGCATCACTCTGGCCCATTGACAGATGAGAGGTCTGAAGCCTTCCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR GCA 90 bp GTGATGCCTGTGGCCAGGAAGGCTTCAGACCTCTCATCTGTCAATGGGCCAGAGGGCTGGGGGCCAAAGTaGATGGGCAGGTTGTGCTCC +
Preference number: 4 (lower is better)
Translates to: VMPVARKASDLSSVNGPEGWGPK*MGRLCS
Trigger: GGAGCACAACCTGCCCATGCACTTTGGCCCCCAGCC...CTCTGGCCCATTGACAGATGAGAGGTCTGAAGCCTTCCTGGCCACAGGCATCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR GCA 90 bp TGCCTGTTGTCTGACCTGCTCTCTGGGCACTGGCACGGCCCCTTGCTGGCTGGTAGACAATCCTGTTGCTaGCGCATGGAGCCTGCCTTT +
Preference number: 4 (lower is better)
Translates to: CLLSDLLSGHWHGPLLAGRQSCC*RMEPAF
Trigger: AAAGGCAGGCTCCATGCGGCAGCAACAGGATTGTCT...ACCAGCCAGCAAGGGGCCGTGCCAGTGCCCAGAGAGCAGGTCAGACAACAGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR GCA 90 bp ACCGAGGATGAGAAAGTTAGGCGGCAACAGAACAAAACCCCCGCCGCGAGATGGGAGAACCAGGGTGGGTaGTCACGGCAGCCCTGTGGT +
Preference number: 4 (lower is better)
Translates to: TEDEKVRRQQNKTPAARWENQGG*SRQPCG
Trigger: ACCACAGGGCTGCCGTGAGCACCCACCCTGGTTCTC...CCATCTCGCGGCGGGGGTTTTGTTCTGTTGCCGCCTAACTTTCTCATCCTCGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR GCA 90 bp TCTCTCCCCAATGCTGTCACTGGTCCAGGCAGGAGCCCGAGGTTCAGGCCCTGCTCTGAAGACCCCCAGTaGTTCTCTCCCCAATGCTGT +
Preference number: 4 (lower is better)
Translates to: SLPNAVTGPGRSPRFRPCSEDPQ*FSPQCC
Trigger: ACAGCATTGGGGAGAGAAGCACTGGGGGTCTTCAGA...GCAGGGCCTGAACCTCGGGCTCCTGCCTGGACCAGTGACAGCATTGGGGAGAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR CCA 90 bp CACACGGGGCAGGGGTGGCACCCAGGGTCACCTGTCTCCCTAAGGAGGCCCACTAGCAGTCTTCTTCGATaGCCTGATCATCTGCTAGAG +
Preference number: 4 (lower is better)
Translates to: HTGQGWHPGSPVSLRRPTSSLLR*PDHLLE
Trigger: CTCTAGCAGATGATCAGGCCATCGAAGAAGACTGCT...AGTGGGCCTCCTTAGGGAGACAGGTGACCCTGGGTGCCACCCCTGCCCCGTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR CCA 90 bp GTGATGCCTGTGGCCAGGAAGGCTTCAGACCTCTCATCTGTCAATGGGCCAGAGCTGGGGTTCCGGCCTTaGAAAAGCGGGCCCTGGGAA +
Preference number: 4 (lower is better)
Translates to: VMPVARKASDLSSVNGPELGFRP*KSGPWE
Trigger: TTCCCAGGGCCCGCTTTTCCAAGGCCGGAACCCCAG...CTCTGGCCCATTGACAGATGAGAGGTCTGAAGCCTTCCTGGCCACAGGCATCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR CCA 90 bp ATAGTTGACCCGCACGTTGGGCAGAGGGGGCACGTACGGGGCTGGGATAGGCCCCCAGTCCCACACTTGTaGCATTTTCTAATGCGGGCA +
Preference number: 4 (lower is better)
Translates to: IVDPHVGQRGHVRGWDRPPVPHL*HFLMRA
Trigger: TGCCCGCATTAGAAAATGCCACAAGTGTGGGACTGG...GGGCCTATCCCAGCCCCGTACGTGCCCCCTCTGCCCAACGTGCGGGTCAACTAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000389900.8
CDS-3UTR CCA 90 bp CCTTCTCCAGCTCACTGGTTGGGAACGAACACGTGCAGCTGCCTTCCATGCAGCTGGCATCTGTGGCTGTaGCAGGTTCTGCGGAACGGG +
Preference number: 4 (lower is better)
Translates to: PSPAHWLGTNTCSCLPCSWHLWL*QVLRNG
Trigger: CCCGTTCCGCAGAACCTGCCACAGCCACAGATGCCA...GCTGCATGGAAGGCAGCTGCACGTGTTCGTTCCCAACCAGTGAGCTGGAGAAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389900.8
CDS-3UTR CCA 90 bp GCTGGCTGGTCTGAAGACCCCCAGTGCTTCTCTCCCCAATGCTGTCACTGGTCCATAGGGTGGCATCTGTaGCTGTGGCAGGTTCTGCGG +
Preference number: 4 (lower is better)
Translates to: AGWSEDPQCFSPQCCHWSIGWHL*LWQVLR
Trigger: CCGCAGAACCTGCCACAGCCACAGATGCCACCCTAT...GGACCAGTGACAGCATTGGGGAGAGAAGCACTGGGGGTCTTCAGACCAGCCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR CCA 90 bp GTGTCTGAGGTCTGTGAACTCCCAGCCTCTCAGAACCCCATGGCAACACGACAAAGGCAGGGGGAAGGGTaGGTGCGCGAAGGCATAGGG +
Preference number: 4 (lower is better)
Translates to: VSEVCELPASQNPMATRQRQGEG*VREGIG
Trigger: CCCTATGCCTTCGCGCACCCACCCTTCCCCCTGCCT...TTGTCGTGTTGCCATGGGGTTCTGAGAGGCTGGGAGTTCACAGACCTCAGACAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR CCA 90 bp GGGTTCTCCATCCACACTCCTACCCCAAACGGGCTTTGTGCTGCTCAATGGGGAGGGGGCCAAAGTGCATaGGCAGGTTGTGCTCCAGGG +
Preference number: 4 (lower is better)
Translates to: GFSIHTPTPNGLCAAQWGGGQSA*AGCAPG
Trigger: CCCTGGAGCACAACCTGCCCATGCACTTTGGCCCCC...TCCCCATTGAGCAGCACAAAGCCCGTTTGGGGTAGGAGTGTGGATGGAGAACCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000389900.8
ENST00000389902.8
ENST00000425013.6
CDS-3UTR CCA 90 bp CTCATCACCCAGGGTGGCAGAAACGTCTCCCCCAGCAGTTGGGCTGCCCAGCAGCTTTGTGCTGCTCAATaGGGATTCGGGGCCATCAGA +
Preference number: 4 (lower is better)
Translates to: LITQGGRNVSPSSWAAQQLCAAQ*GFGAIR
Trigger: TCTGATGGCCCCGAATCCCCATTGAGCAGCACAAAG...CTGCTGGGCAGCCCAACTGCTGGGGGAGACGTTTCTGCCACCCTGGGTGATGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR CCA 90 bp CTCATCACCCAGGGTGGCAGAAACGTCTCCCCCAGCAGTTGGGCTGCCCAGCAGTTGCCACTGGGCAGCTaGTTTGATGAGATTGGGTCG +
Preference number: 4 (lower is better)
Translates to: LITQGGRNVSPSSWAAQQLPLGS*FDEIGS
Trigger: CGACCCAATCTCATCAAACCAGCTGCCCAGTGGCAA...CTGCTGGGCAGCCCAACTGCTGGGGGAGACGTTTCTGCCACCCTGGGTGATGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389902.8
CDS-3UTR CCA 90 bp CCCTTTGTCCTGCCTGGGGCTCTTGCTGGAGCCACGTGCCTAGGGTACAGGGCACTATGGCCTATGCCATaGACAAGGCAGAAGGACTGC +
Preference number: 4 (lower is better)
Translates to: PFVLPGALAGATCLGYRALWPMP*TRQKDC
Trigger: GCAGTCCTTCTGCCTTGTCCATGGCATAGGCCATAG...TGCCCTGTACCCTAGGCACGTGGCTCCAGCAAGAGCCCCAGGCAGGACAAAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR CCA 90 bp CCCCGCCGCGAGATGGGTCTGCTGCTGCCTCATCTGAGTAGGTGTAAGAGGGGACAGGGACCTGGTCTATaGCCTATGCCATGGACAAGG +
Preference number: 4 (lower is better)
Translates to: PRREMGLLLPHLSRCKRGQGPGL*PMPWTR
Trigger: CCTTGTCCATGGCATAGGCCATAGACCAGGTCCCTG...TCCCCTCTTACACCTACTCAGATGAGGCAGCAGCAGACCCATCTCGCGGCGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR CCA 90 bp CCTACCCTTCAAGCTGACTTAGGATGCAATGGTACAGACACCAGCCTTGGGGGAGTCTCCCCCAGCAGTTaGGCTGCCCAGCAGGGCCAC +
Preference number: 4 (lower is better)
Translates to: PTLQADLGCNGTDTSLGGVSPSS*AAQQGH
Trigger: GTGGCCCTGCTGGGCAGCCCAACTGCTGGGGGAGAC...TCCCCCAAGGCTGGTGTCTGTACCATTGCATCCTAAGTCAGCTTGAAGGGTAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR CCA 90 bp CTTGGGTGGGCCAGGCCCTGCTTCAGGAGGTGGCGGGCCACTCCGGAGACTGATTCAAAGCCTCCATCCTaGGCAAAGGCAGAAAGAATG +
Preference number: 4 (lower is better)
Translates to: LGWARPCFRRWRATPETDSKPPS*AKAERM
Trigger: CATTCTTTCTGCCTTTGCCCAGGATGGAGGCTTTGA...ATCAGTCTCCGGAGTGGCCCGCCACCTCCTGAAGCAGGGCCTGGCCCACCCAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR CCA 90 bp GGGTTCTCCATCCACACTCCTACCCCAAACGGGCTTTGTGCTGCTCAATGGGGAGCCTGGGGCTCTTGCTaGAGCCACGTGCCTAGGGTA +
Preference number: 4 (lower is better)
Translates to: GFSIHTPTPNGLCAAQWGAWGSC*SHVPRV
Trigger: TACCCTAGGCACGTGGCTCCAGCAAGAGCCCCAGGC...TCCCCATTGAGCAGCACAAAGCCCGTTTGGGGTAGGAGTGTGGATGGAGAACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR CCA 90 bp TGCCTGTTGTCTGACCTGCTCTCTGGGCACTGGCACGGCCCCTTGCTGGCTGGTCAAATGACCCACCCCTaGGGTTTGGCCTTAGGAGAA +
Preference number: 4 (lower is better)
Translates to: CLLSDLLSGHWHGPLLAGQMTHP*GLALGE
Trigger: TTCTCCTAAGGCCAAACCCCAGGGGTGGGTCATTTG...ACCAGCCAGCAAGGGGCCGTGCCAGTGCCCAGAGAGCAGGTCAGACAACAGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR CCA 90 bp GATCCTCCCTGGGGAAGCACAGGGAGCATATTTAAGGTACCGAAGACAATCCTGCTCACGGCAGCCCTGTaGTCCCCCGTGCCTGGCTCG +
Preference number: 4 (lower is better)
Translates to: DPPWGSTGSIFKVPKTILLTAAL*SPVPGS
Trigger: CGAGCCAGGCACGGGGGACCACAGGGCTGCCGTGAG...CAGGATTGTCTTCGGTACCTTAAATATGCTCCCTGTGCTTCCCCAGGGAGGATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR TCA 90 bp CCCCGCCGCGAGATGGGTCTGCTGCTGCCTCATCTGAGTAGGTGTAAGAGGGGACCTGGGAATTCATGCTaGAACAACAAGCGGCCCAGT +
Preference number: 4 (lower is better)
Translates to: PRREMGLLLPHLSRCKRGPGNSC*NNKRPS
Trigger: ACTGGGCCGCTTGTTGTTTCAGCATGAATTCCCAGG...TCCCCTCTTACACCTACTCAGATGAGGCAGCAGCAGACCCATCTCGCGGCGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR TCA 90 bp ATGCAGCCCCACCCCAATGGTTGTCGGACTCAGCTGTGTCTGAGGTCTGTGAACAGGAGAAGAGGGGCCTaGAATCCCACCTTGCTGGGG +
Preference number: 4 (lower is better)
Translates to: MQPHPNGCRTQLCLRSVNRRRGA*NPTLLG
Trigger: CCCCAGCAAGGTGGGATTTCAGGCCCCTCTTCTCCT...GTTCACAGACCTCAGACACAGCTGAGTCCGACAACCATTGGGGTGGGGCTGCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR TCA 90 bp CCCTTTGTCCTGCCTGGGGCTCTTGCTGGAGCCACGTGCCTAGGGTACAGGGCAGTTTCCTTTCGGCAGTaGGGATTAGGACAGCTGAAC +
Preference number: 4 (lower is better)
Translates to: PFVLPGALAGATCLGYRAVSFRQ*GLGQLN
Trigger: GTTCAGCTGTCCTAATCCTCACTGCCGAAAGGAAAC...TGCCCTGTACCCTAGGCACGTGGCTCCAGCAAGAGCCCCAGGCAGGACAAAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR TCA 90 bp TCTCTCCCCAATGCTGTCACTGGTCCAGGCAGGAGCCCGAGGTTCAGGCCCTGCGCCTACCCTTCAAGCTaGCTTAGGATGCAATGGTAC +
Preference number: 4 (lower is better)
Translates to: SLPNAVTGPGRSPRFRPCAYPSS*LRMQWY
Trigger: GTACCATTGCATCCTAAGTCAGCTTGAAGGGTAGGC...GCAGGGCCTGAACCTCGGGCTCCTGCCTGGACCAGTGACAGCATTGGGGAGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR TCA 90 bp CCTACCCTTCAAGCTGACTTAGGATGCAATGGTACAGACACCAGCCTTGGGGGAGGAGAGGCCCAGGTGTaGGCAGCAGGGACCTGGTCT +
Preference number: 4 (lower is better)
Translates to: PTLQADLGCNGTDTSLGGGEAQV*AAGTWS
Trigger: AGACCAGGTCCCTGCTGCTCACACCTGGGCCTCTCC...TCCCCCAAGGCTGGTGTCTGTACCATTGCATCCTAAGTCAGCTTGAAGGGTAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR TCA 90 bp GAAACCCAGGGCCGGACAGGAGGCGAGGAGGGTGAGTGGGGACATGGCAGGGCTGCCCACTTTAGTCCTTaGAATACATCTGAGAAGCCA +
Preference number: 4 (lower is better)
Translates to: ETQGRTGGEEGEWGHGRAAHFSP*NTSEKP
Trigger: TGGCTTCTCAGATGTATTTCAAGGACTAAAGTGGGC...AGCCCTGCCATGTCCCCACTCACCCTCCTCGCCTCCTGTCCGGCCCTGGGTTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR TCA 90 bp ATGCAGCCCCACCCCAATGGTTGTCGGACTCAGCTGTGTCTGAGGTCTGTGAACCCTTGCTGGCTGGTCTaGAGACCCCCAGTGCTTCTC +
Preference number: 4 (lower is better)
Translates to: MQPHPNGCRTQLCLRSVNPCWLV*RPPVLL
Trigger: GAGAAGCACTGGGGGTCTTCAGACCAGCCAGCAAGG...GTTCACAGACCTCAGACACAGCTGAGTCCGACAACCATTGGGGTGGGGCTGCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR GCA 90 bp GGGTTCTCCATCCACACTCCTACCCCAAACGGGCTTTGTGCTGCTCAATGGGGACAAGCGGCCCAGTTCTaGTTCAGGCTGCCGTTCCTG +
Preference number: 4 (lower is better)
Translates to: GFSIHTPTPNGLCAAQWGQAAQF*FRLPFL
Trigger: CAGGAACGGCAGCCTGAAGCAGAACTGGGCCGCTTG...TCCCCATTGAGCAGCACAAAGCCCGTTTGGGGTAGGAGTGTGGATGGAGAACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389900.8
ENST00000389902.8
ENST00000425013.6
CDS-3UTR GCA 90 bp GAGGGGAGGGGCAGTTCACATCGCAGCTCTCTCCGAACTCCACCATTTGGGACGGAACAAGTGAGCATCTaGGCACTGCGTCAGCTCCTC +
Preference number: 4 (lower is better)
Translates to: EGRGSSHRSSLRTPPFGTEQVSI*ALRQLL
Trigger: GAGGAGCTGACGCAGTGCGCAGATGCTCACTTGTTC...CGTCCCAAATGGTGGAGTTCGGAGAGAGCTGCGATGTGAACTGCCCCTCCCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR GCA 90 bp CACACGGGGCAGGGGTGGCACCCAGGGTCACCTGTCTCCCTAAGGAGGCCCACTCTCAGAATCATCCTGTaGCCCAGAATCAAACAATGG +
Preference number: 4 (lower is better)
Translates to: HTGQGWHPGSPVSLRRPTLRIIL*PRIKQW
Trigger: CCATTGTTTGATTCTGGGGCACAGGATGATTCTGAG...AGTGGGCCTCCTTAGGGAGACAGGTGACCCTGGGTGCCACCCCTGCCCCGTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389902.8
CDS-3UTR GCA 90 bp AGGCTTCAGACCTCTCATCTGTCAATGGGCCAGAGTGATGCCTCAGGCACCGCTTCTACAGCCGCCCTCTaGTCCCAGAGATCCTCCCTG +
Preference number: 4 (lower is better)
Translates to: RLQTSHLSMGQSDASGTASTAAL*SQRSSL
Trigger: CAGGGAGGATCTCTGGGAGCAGAGGGCGGCTGTAGA...AGCGGTGCCTGAGGCATCACTCTGGCCCATTGACAGATGAGAGGTCTGAAGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR GCA 90 bp GGGTTCTCCATCCACACTCCTACCCCAAACGGGCTTTGTGCTGCTCAATGGGGACTTGCTGGAGCCACGTaGCTAGGGTACAGGGCAGAG +
Preference number: 4 (lower is better)
Translates to: GFSIHTPTPNGLCAAQWGLAGAT*LGYRAE
Trigger: CTCTGCCCTGTACCCTAGGCACGTGGCTCCAGCAAG...TCCCCATTGAGCAGCACAAAGCCCGTTTGGGGTAGGAGTGTGGATGGAGAACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR GCA 90 bp CCAGGAAGGCTTCAGACCTCTCATCTGTCAATGGGCCAGAGTGATGCCTCAGGCCTTGCTGGAGCCACGTaGCTAGGGTACAGGGCAGAG +
Preference number: 4 (lower is better)
Translates to: PGRLQTSHLSMGQSDASGLAGAT*LGYRAE
Trigger: CTCTGCCCTGTACCCTAGGCACGTGGCTCCAGCAAG...GCCTGAGGCATCACTCTGGCCCATTGACAGATGAGAGGTCTGAAGCCTTCCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR GCA 90 bp GAGGGGAGGGGCAGTTCACATCGCAGCTCTCTCCGAACTCCACCATTTGGGACGTGTTTCTGCAGCTGCTaGCTGCTCCCTTTGTCCTGC +
Preference number: 4 (lower is better)
Translates to: EGRGSSHRSSLRTPPFGTCFCSC*LLPLSC
Trigger: GCAGGACAAAGGGAGCAGGCAGCAGCTGCAGAAACA...CGTCCCAAATGGTGGAGTTCGGAGAGAGCTGCGATGTGAACTGCCCCTCCCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR GCA 90 bp GTGTCTGAGGTCTGTGAACTCCCAGCCTCTCAGAACCCCATGGCAACACGACAAGAGAACCAGGGTGGGTaGTCACGGCAGCCCTGTGGT +
Preference number: 4 (lower is better)
Translates to: VSEVCELPASQNPMATRQENQGG*SRQPCG
Trigger: ACCACAGGGCTGCCGTGAGCACCCACCCTGGTTCTC...TTGTCGTGTTGCCATGGGGTTCTGAGAGGCTGGGAGTTCACAGACCTCAGACAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR GCA 90 bp GGGTTCTCCATCCACACTCCTACCCCAAACGGGCTTTGTGCTGCTCAATGGGGAGCCTGTTGTCTGACCTaGTCTCTGGGCACTGGCACG +
Preference number: 4 (lower is better)
Translates to: GFSIHTPTPNGLCAAQWGACCLT*SLGTGT
Trigger: CGTGCCAGTGCCCAGAGAGCAGGTCAGACAACAGGC...TCCCCATTGAGCAGCACAAAGCCCGTTTGGGGTAGGAGTGTGGATGGAGAACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR CCA 90 bp AGGCTTCAGACCTCTCATCTGTCAATGGGCCAGAGTGATGCCTCAGGCACCGCTCGCGAAGGCATAGGGTaGCATCTGTGGCTGTGGCAG +
Preference number: 4 (lower is better)
Translates to: RLQTSHLSMGQSDASGTAREGIG*HLWLWQ
Trigger: CTGCCACAGCCACAGATGCCACCCTATGCCTTCGCG...AGCGGTGCCTGAGGCATCACTCTGGCCCATTGACAGATGAGAGGTCTGAAGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR CCA 90 bp ACCGAGGATGAGAAAGTTAGGCGGCAACAGAACAAAACCCCCGCCGCGAGATGGCGCAGCGGCCTGGCCTaGGAAAGGATTTCTCAGCCT +
Preference number: 4 (lower is better)
Translates to: TEDEKVRRQQNKTPAARWRSGLA*ERISQP
Trigger: AGGCTGAGAAATCCTTTCCCAGGCCAGGCCGCTGCG...CCATCTCGCGGCGGGGGTTTTGTTCTGTTGCCGCCTAACTTTCTCATCCTCGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR CCA 90 bp CCAGGAAGGCTTCAGACCTCTCATCTGTCAATGGGCCAGAGTGATGCCTCAGGCGCTCATCACCCAGGGTaGCAGAAACGTCTCCCCCAG +
Preference number: 4 (lower is better)
Translates to: PGRLQTSHLSMGQSDASGAHHPG*QKRLPQ
Trigger: CTGGGGGAGACGTTTCTGCCACCCTGGGTGATGAGC...GCCTGAGGCATCACTCTGGCCCATTGACAGATGAGAGGTCTGAAGCCTTCCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR CCA 90 bp GCTGGCTGGTCTGAAGACCCCCAGTGCTTCTCTCCCCAATGCTGTCACTGGTCCTCACATGGGGGATACTaGACAGCACCCTCTACCTGC +
Preference number: 4 (lower is better)
Translates to: AGWSEDPQCFSPQCCHWSSHGGY*TAPSTC
Trigger: GCAGGTAGAGGGTGCTGTCCAGTATCCCCCATGTGA...GGACCAGTGACAGCATTGGGGAGAGAAGCACTGGGGGTCTTCAGACCAGCCAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR CCA 90 bp GGGTTCTCCATCCACACTCCTACCCCAAACGGGCTTTGTGCTGCTCAATGGGGACCTGTTGCTGCCGCATaGAGCCTGCCTTTCCAAGGC +
Preference number: 4 (lower is better)
Translates to: GFSIHTPTPNGLCAAQWGPVAAA*SLPFQG
Trigger: GCCTTGGAAAGGCAGGCTCCATGCGGCAGCAACAGG...TCCCCATTGAGCAGCACAAAGCCCGTTTGGGGTAGGAGTGTGGATGGAGAACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR CCA 90 bp CCAGGAAGGCTTCAGACCTCTCATCTGTCAATGGGCCAGAGTGATGCCTCAGGCTCCCTTTGTCCTGCCTaGGGCTCTTGCTGGAGCCAC +
Preference number: 4 (lower is better)
Translates to: PGRLQTSHLSMGQSDASGSLCPA*GSCWSH
Trigger: GTGGCTCCAGCAAGAGCCCCAGGCAGGACAAAGGGA...GCCTGAGGCATCACTCTGGCCCATTGACAGATGAGAGGTCTGAAGCCTTCCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR CCA 90 bp GTGATGCCTGTGGCCAGGAAGGCTTCAGACCTCTCATCTGTCAATGGGCCAGAGCCCACCAGCCCAGTGTaGCCAGAACAGCTGGAACTC +
Preference number: 4 (lower is better)
Translates to: VMPVARKASDLSSVNGPEPTSPV*PEQLEL
Trigger: GAGTTCCAGCTGTTCTGGCCACACTGGGCTGGTGGG...CTCTGGCCCATTGACAGATGAGAGGTCTGAAGCCTTCCTGGCCACAGGCATCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR CCA 90 bp AGGCTTCAGACCTCTCATCTGTCAATGGGCCAGAGTGATGCCTCAGGCACCGCTCCCACCAGCCCAGTGTaGCCAGAACAGCTGGAACTC +
Preference number: 4 (lower is better)
Translates to: RLQTSHLSMGQSDASGTAPTSPV*PEQLEL
Trigger: GAGTTCCAGCTGTTCTGGCCACACTGGGCTGGTGGG...AGCGGTGCCTGAGGCATCACTCTGGCCCATTGACAGATGAGAGGTCTGAAGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR CCA 90 bp TTCAGGCTAGTAGCAAAGTTCAGGCAGTCCAACAGGTATGGGCGCCAGCAAGGAAGTAAGAGGGGGCTGTaGCTGGGGAGCCTCACGCCC +
Preference number: 4 (lower is better)
Translates to: FRLVAKFRQSNRYGRQQGSKRGL*LGSLTP
Trigger: GGGCGTGAGGCTCCCCAGCCACAGCCCCCTCTTACT...TCCTTGCTGGCGCCCATACCTGTTGGACTGCCTGAACTTTGCTACTAGCCTGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR TCA 90 bp TCCAGCTCACTGGTTGGGAACGAACACGTGCAGCTGCCTTCCATGCAGCTGAGCGCCCATCTCGGAGATTaGTCCACTCTTGTCCCCGAT +
Preference number: 4 (lower is better)
Translates to: SSSLVGNEHVQLPSMQLSAHLGD*STLVPD
Trigger: ATCGGGGACAAGAGTGGATCAATCTCCGAGATGGGC...GCTCAGCTGCATGGAAGGCAGCTGCACGTGTTCGTTCCCAACCAGTGAGCTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389900.8
CDS-3UTR TCA 90 bp GCTGGCTGGTCTGAAGACCCCCAGTGCTTCTCTCCCCAATGCTGTCACTGGTCCTTTGCTGCTTGGTTATaGCTCGGTCCAGGCTTGGGT +
Preference number: 4 (lower is better)
Translates to: AGWSEDPQCFSPQCCHWSFAAWL*LGPGLG
Trigger: ACCCAAGCCTGGACCGAGTCATAACCAAGCAGCAAA...GGACCAGTGACAGCATTGGGGAGAGAAGCACTGGGGGTCTTCAGACCAGCCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR TCA 90 bp GCTGGCTGGTCTGAAGACCCCCAGTGCTTCTCTCCCCAATGCTGTCACTGGTCCTCTTTGCAGAACAAGTaGGCATCTGCGCACTGCGTC +
Preference number: 4 (lower is better)
Translates to: AGWSEDPQCFSPQCCHWSSLQNK*ASAHCV
Trigger: GACGCAGTGCGCAGATGCTCACTTGTTCTGCAAAGA...GGACCAGTGACAGCATTGGGGAGAGAAGCACTGGGGGTCTTCAGACCAGCCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR TCA 90 bp GCTCGTCGGCGTAGGCTGCCGCAACCTCCTCCTCGGCTTTTCGCTCATAGTACTTGCCTTCCATGCAGCTaGGCTCCAACTTTCCAGATC +
Preference number: 4 (lower is better)
Translates to: ARRRRLPQPPPRLFAHSTCLPCS*APTFQI
Trigger: GATCTGGAAAGTTGGAGCTCAGCTGCATGGAAGGCA...AGTACTATGAGCGAAAAGCCGAGGAGGAGGTTGCGGCAGCCTACGCCGACGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389900.8
CDS-3UTR TCA 90 bp CCGCAACCTCCTCCTCGGCTTTTCGCTCATAGTACTTATACAGGATGGTCTGGGGCAAGGGGCTCCTGGTaGGCGGGGATGTTGGCAGAA +
Preference number: 4 (lower is better)
Translates to: PQPPPRLFAHSTYTGWSGARGSW*AGMLAE
Trigger: TTCTGCCAACATCCCCGCTCACCAGGAGCCCCTTGC...CCCAGACCATCCTGTATAAGTACTATGAGCGAAAAGCCGAGGAGGAGGTTGCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000389900.8
CDS-3UTR TCA 90 bp GGGTTCTCCATCCACACTCCTACCCCAAACGGGCTTTGTGCTGCTCAATGGGGAAGGAGGAGGAGAAAGTaGTGCCTGTGGCCAGGAAGG +
Preference number: 4 (lower is better)
Translates to: GFSIHTPTPNGLCAAQWGRRRRK*CLWPGR
Trigger: CCTTCCTGGCCACAGGCATCACTTTCTCCTCCTCCT...TCCCCATTGAGCAGCACAAAGCCCGTTTGGGGTAGGAGTGTGGATGGAGAACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR TCA 90 bp ACCCTCCAAGGAAAGAGGCCGCCGCTCCTTCCCCACCAGCCCAGTGTGGCCAGATCCTTGAAATACATCTaGGAAGCCAATGGCAGCGAA +
Preference number: 4 (lower is better)
Translates to: TLQGKRPPLLPHQPSVARSLKYI*EANGSE
Trigger: TTCGCTGCCATTGGCTTCTCAGATGTATTTCAAGGA...TCTGGCCACACTGGGCTGGTGGGGAAGGAGCGGCGGCCTCTTTCCTTGGAGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR TCA 90 bp ACCCTCCAAGGAAAGAGGCCGCCGCTCCTTCCCCACCAGCCCAGTGTGGCCAGAGCCCACTTTAGTCCTTaGAATACATCTGAGAAGCCA +
Preference number: 4 (lower is better)
Translates to: TLQGKRPPLLPHQPSVARAHFSP*NTSEKP
Trigger: TGGCTTCTCAGATGTATTTCAAGGACTAAAGTGGGC...TCTGGCCACACTGGGCTGGTGGGGAAGGAGCGGCGGCCTCTTTCCTTGGAGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR TCA 90 bp GTGGGCCCCTCCAGGGAGATGCTCTCGGCTGCCTTGCTACCCAGGGGTCGGCTCAGTCCCAGTTACATATaGTACAGGCTTTTTACACAC +
Preference number: 4 (lower is better)
Translates to: VGPSREMLSAALLPRGRLSPSYI*YRLFTH
Trigger: GTGTGTAAAAAGCCTGTATCATATGTAACTGGGACT...GAGCCGACCCCTGGGTAGCAAGGCAGCCGAGAGCATCTCCCTGGAGGGGCCCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR GCA 90 bp TCTCCATCCACACTCCTACCCCAAACGGGCTTTGTGCTGCTCAATGGGGATTCGCAAGCGGCCCAGTTCTaGTTCAGGCTGCCGTTCCTG +
Preference number: 4 (lower is better)
Translates to: SPSTLLPQTGFVLLNGDSQAAQF*FRLPFL
Trigger: CAGGAACGGCAGCCTGAAGCAGAACTGGGCCGCTTG...CGAATCCCCATTGAGCAGCACAAAGCCCGTTTGGGGTAGGAGTGTGGATGGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389900.8
ENST00000389902.8
ENST00000425013.6
CDS-3UTR GCA 90 bp ATGCAGCCCCACCCCAATGGTTGTCGGACTCAGCTGTGTCTGAGGTCTGTGAACCCTGAAATCCCACCTTaGTGGGGTTCCGGCCTTGGA +
Preference number: 4 (lower is better)
Translates to: MQPHPNGCRTQLCLRSVNPEIPP*WGSGLG
Trigger: TCCAAGGCCGGAACCCCAGCAAGGTGGGATTTCAGG...GTTCACAGACCTCAGACACAGCTGAGTCCGACAACCATTGGGGTGGGGCTGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR GCA 90 bp ACCCTCCAAGGAAAGAGGCCGCCGCTCCTTCCCCACCAGCCCAGTGTGGCCAGATCCAGATCCAAAGACTaGCTCTTGGGCATATCTGAT +
Preference number: 4 (lower is better)
Translates to: TLQGKRPPLLPHQPSVARSRSKD*LLGISD
Trigger: ATCAGATATGCCCAAGAGGCAGTCTTTGGATCTGGA...TCTGGCCACACTGGGCTGGTGGGGAAGGAGCGGCGGCCTCTTTCCTTGGAGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR GCA 90 bp CAGGTTGTGCTCCAGGGGCATGTGGATGGGACCGAAGTCATAGTTGACCCGCACTTGGGAACGAACACGTaGAGCTGCCTTCCATGCAGC +
Preference number: 4 (lower is better)
Translates to: QVVLQGHVDGTEVIVDPHLGTNT*SCLPCS
Trigger: GCTGCATGGAAGGCAGCTGCACGTGTTCGTTCCCAA...GTGCGGGTCAACTATGACTTCGGTCCCATCCACATGCCCCTGGAGCACAACCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389900.8
CDS-3UTR GCA 90 bp CCTTCTCCAGCTCACTGGTTGGGAACGAACACGTGCAGCTGCCTTCCATGCAGCAAACGGGCTTTGTGCTaGTCAATGGGGATTCGGGGC +
Preference number: 4 (lower is better)
Translates to: PSPAHWLGTNTCSCLPCSKRALC*SMGIRG
Trigger: GCCCCGAATCCCCATTGAGCAGCACAAAGCCCGTTT...GCTGCATGGAAGGCAGCTGCACGTGTTCGTTCCCAACCAGTGAGCTGGAGAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389900.8
CDS-3UTR GCA 90 bp CCTACCCTTCAAGCTGACTTAGGATGCAATGGTACAGACACCAGCCTTGGGGGAGGAGATGCTCTCGGCTaGCTTGCTACCCAGGGGTCG +
Preference number: 4 (lower is better)
Translates to: PTLQADLGCNGTDTSLGGGDALG*LATQGS
Trigger: CGACCCCTGGGTAGCAAGGCAGCCGAGAGCATCTCC...TCCCCCAAGGCTGGTGTCTGTACCATTGCATCCTAAGTCAGCTTGAAGGGTAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR GCA 90 bp GTGTCTGAGGTCTGTGAACTCCCAGCCTCTCAGAACCCCATGGCAACACGACAACTGCTCCCTTTGTCCTaGCTGGGGCTCTTGCTGGAG +
Preference number: 4 (lower is better)
Translates to: VSEVCELPASQNPMATRQLLPLS*LGLLLE
Trigger: CTCCAGCAAGAGCCCCAGGCAGGACAAAGGGAGCAG...TTGTCGTGTTGCCATGGGGTTCTGAGAGGCTGGGAGTTCACAGACCTCAGACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR GCA 90 bp GGGTTCTCCATCCACACTCCTACCCCAAACGGGCTTTGTGCTGCTCAATGGGGAGGCTGTTTCTGCAGCTaGTGCCTGCTCCCTTTGTCC +
Preference number: 4 (lower is better)
Translates to: GFSIHTPTPNGLCAAQWGGCFCS*CLLPLS
Trigger: GGACAAAGGGAGCAGGCAGCAGCTGCAGAAACAGCC...TCCCCATTGAGCAGCACAAAGCCCGTTTGGGGTAGGAGTGTGGATGGAGAACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR CCA 90 bp ACTGTCCAACAGAGCCGGAAAGCTACAGGACGGGCACCTGACAAGCTCGTCGGCGACTCGGTCCAGGCTTaGGTTCTCTTTCTGTTTGGC +
Preference number: 4 (lower is better)
Translates to: TVQQSRKATGRAPDKLVGDSVQA*VLFLFG
Trigger: GCCAAACAGAAAGAGAACCCAAGCCTGGACCGAGTC...GCCGACGAGCTTGTCAGGTGCCCGTCCTGTAGCTTTCCGGCTCTGTTGGACAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389900.8
CDS-3UTR CCA 90 bp GAGGGGAGGGGCAGTTCACATCGCAGCTCTCTCCGAACTCCACCATTTGGGACGGACTCGGTCCAGGCTTaGGTTCTCTTTCTGTTTGGC +
Preference number: 4 (lower is better)
Translates to: EGRGSSHRSSLRTPPFGTDSVQA*VLFLFG
Trigger: GCCAAACAGAAAGAGAACCCAAGCCTGGACCGAGTC...CGTCCCAAATGGTGGAGTTCGGAGAGAGCTGCGATGTGAACTGCCCCTCCCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR CCA 90 bp GCTGGCTGGTCTGAAGACCCCCAGTGCTTCTCTCCCCAATGCTGTCACTGGTCCGACTCGGTCCAGGCTTaGGTTCTCTTTCTGTTTGGC +
Preference number: 4 (lower is better)
Translates to: AGWSEDPQCFSPQCCHWSDSVQA*VLFLFG
Trigger: GCCAAACAGAAAGAGAACCCAAGCCTGGACCGAGTC...GGACCAGTGACAGCATTGGGGAGAGAAGCACTGGGGGTCTTCAGACCAGCCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR CCA 90 bp TCTCTCCCCAATGCTGTCACTGGTCCAGGCAGGAGCCCGAGGTTCAGGCCCTGCTGGAAAAGCGGGCCCTaGGAATTCATGCTGAAACAA +
Preference number: 4 (lower is better)
Translates to: SLPNAVTGPGRSPRFRPCWKSGP*EFMLKQ
Trigger: TTGTTTCAGCATGAATTCCCAGGGCCCGCTTTTCCA...GCAGGGCCTGAACCTCGGGCTCCTGCCTGGACCAGTGACAGCATTGGGGAGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR CCA 90 bp ACAGCATCTTGGCCCTCACAGCTGTGGCAGTGCCTCTGCGGGCCATGGTCCCAGTTGCATTGGAAAGGCTaGACCTGGCTCTTCATCATC +
Preference number: 4 (lower is better)
Translates to: TASWPSQLWQCLCGPWSQLHWKG*TWLFII
Trigger: GATGATGAAGAGCCAGGTCCAGCCTTTCCAATGCAA...CTGGGACCATGGCCCGCAGAGGCACTGCCACAGCTGTGAGGGCCAAGATGCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR CCA 90 bp CCCTTTGTCCTGCCTGGGGCTCTTGCTGGAGCCACGTGCCTAGGGTACAGGGCACCAAAGACTGCCTCTTaGGCATATCTGATGAGACAC +
Preference number: 4 (lower is better)
Translates to: PFVLPGALAGATCLGYRAPKTAS*AYLMRH
Trigger: GTGTCTCATCAGATATGCCCAAGAGGCAGTCTTTGG...TGCCCTGTACCCTAGGCACGTGGCTCCAGCAAGAGCCCCAGGCAGGACAAAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR CCA 90 bp ACAGCATCTTGGCCCTCACAGCTGTGGCAGTGCCTCTGCGGGCCATGGTCCCAGCCAAAGACTGCCTCTTaGGCATATCTGATGAGACAC +
Preference number: 4 (lower is better)
Translates to: TASWPSQLWQCLCGPWSQPKTAS*AYLMRH
Trigger: GTGTCTCATCAGATATGCCCAAGAGGCAGTCTTTGG...CTGGGACCATGGCCCGCAGAGGCACTGCCACAGCTGTGAGGGCCAAGATGCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR CCA 90 bp CCCCGCCGCGAGATGGGTCTGCTGCTGCCTCATCTGAGTAGGTGTAAGAGGGGATCTCATCATCTTCAGTaGGATCGGTCCAGAGAGAGC +
Preference number: 4 (lower is better)
Translates to: PRREMGLLLPHLSRCKRGSHHLQ*DRSRES
Trigger: GCTCTCTCTGGACCGATCCCACTGAAGATGATGAGA...TCCCCTCTTACACCTACTCAGATGAGGCAGCAGCAGACCCATCTCGCGGCGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR CCA 90 bp CCTCCAGGGAGATGCTCTCGGCTGCCTTGCTACCCAGGGGTCGGCTCCGAGGAGTCTTCAGCCTCCTTCTaGATTTCCTCAATAAGCTTC +
Preference number: 4 (lower is better)
Translates to: PPGRCSRLPCYPGVGSEESSASF*ISSISF
Trigger: GAAGCTTATTGAGGAAATCCAGAAGGAGGCTGAAGA...CTCCTCGGAGCCGACCCCTGGGTAGCAAGGCAGCCGAGAGCATCTCCCTGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR CCA 90 bp AACCTCCTCCTCGGCTTTTCGCTCATAGTACTTATACAGGATGGTCTGGGGGAGAGGCAGGGGGAAGGGTaGGTGCGCGAAGGCATAGGG +
Preference number: 4 (lower is better)
Translates to: NLLLGFSLIVLIQDGLGERQGEG*VREGIG
Trigger: CCCTATGCCTTCGCGCACCCACCCTTCCCCCTGCCT...CTCCCCCAGACCATCCTGTATAAGTACTATGAGCGAAAAGCCGAGGAGGAGGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000389900.8
CDS-3UTR CCA 90 bp CCCCGCCGCGAGATGGGTCTGCTGCTGCCTCATCTGAGTAGGTGTAAGAGGGGAAGGCCCCATGTTGAGTaGGAAGTTGTTGAACACAGG +
Preference number: 4 (lower is better)
Translates to: PRREMGLLLPHLSRCKRGRPHVE*EVVEHR
Trigger: CCTGTGTTCAACAACTTCCCACTCAACATGGGGCCT...TCCCCTCTTACACCTACTCAGATGAGGCAGCAGCAGACCCATCTCGCGGCGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR CCA 90 bp CCTCCAGGGAGATGCTCTCGGCTGCCTTGCTACCCAGGGGTCGGCTCCGAGGAGCCCATTTGCTACATCTaGAAATCTTGCTTCCGTTTC +
Preference number: 4 (lower is better)
Translates to: PPGRCSRLPCYPGVGSEEPICYI*KSCFRF
Trigger: GAAACGGAAGCAAGATTTCCAGATGTAGCAAATGGG...CTCCTCGGAGCCGACCCCTGGGTAGCAAGGCAGCCGAGAGCATCTCCCTGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR CCA 90 bp TGCCTGTTGTCTGACCTGCTCTCTGGGCACTGGCACGGCCCCTTGCTGGCTGGTTCAAAGCCTCCATCCTaGGCAAAGGCAGAAAGAATG +
Preference number: 4 (lower is better)
Translates to: CLLSDLLSGHWHGPLLAGSKPPS*AKAERM
Trigger: CATTCTTTCTGCCTTTGCCCAGGATGGAGGCTTTGA...ACCAGCCAGCAAGGGGCCGTGCCAGTGCCCAGAGAGCAGGTCAGACAACAGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR CCA 90 bp TCTCCATCCACACTCCTACCCCAAACGGGCTTTGTGCTGCTCAATGGGGATTCGGGAGAAACATCACTCTaGGCTCCCCCTCCCCTGCCA +
Preference number: 4 (lower is better)
Translates to: SPSTLLPQTGFVLLNGDSGETSL*APPPLP
Trigger: TGGCAGGGGAGGGGGAGCCCAGAGTGATGTTTCTCC...CGAATCCCCATTGAGCAGCACAAAGCCCGTTTGGGGTAGGAGTGTGGATGGAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR CCA 90 bp CCTACCCTTCAAGCTGACTTAGGATGCAATGGTACAGACACCAGCCTTGGGGGACCCCAATGCTGTCACTaGTCCAGGCAGGAGCCCGAG +
Preference number: 4 (lower is better)
Translates to: PTLQADLGCNGTDTSLGGPQCCH*SRQEPE
Trigger: CTCGGGCTCCTGCCTGGACCAGTGACAGCATTGGGG...TCCCCCAAGGCTGGTGTCTGTACCATTGCATCCTAAGTCAGCTTGAAGGGTAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR CCA 90 bp TTCAGGCTAGTAGCAAAGTTCAGGCAGTCCAACAGGTATGGGCGCCAGCAAGGACCCCAATGCTGTCACTaGTCCAGGCAGGAGCCCGAG +
Preference number: 4 (lower is better)
Translates to: FRLVAKFRQSNRYGRQQGPQCCH*SRQEPE
Trigger: CTCGGGCTCCTGCCTGGACCAGTGACAGCATTGGGG...TCCTTGCTGGCGCCCATACCTGTTGGACTGCCTGAACTTTGCTACTAGCCTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
3UTR CAA 72 bp CATCATCTTCAGTGGGATCGGTCCAGAGAGAGCATCTaGAACACTCCTGGCAAGGGGCTCCTGGTGAGCGGG +
Preference number: 4 (lower is better)
Translates to: HHLQWDRSRESI*NTPGKGLLVSG
Trigger: CCCGCTCACCAGGAGCCCCTTGCCAGGAGTGTTCAAGATGCTCTCTCTGGACCGATCCCACTGAAGATGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389900.8
CDS-3UTR TCA 90 bp CCAGGAAGGCTTCAGACCTCTCATCTGTCAATGGGCCAGAGTGATGCCTCAGGCGCCCATCTCGGAGATTaGTCCACTCTTGTCCCCGAT +
Preference number: 4 (lower is better)
Translates to: PGRLQTSHLSMGQSDASGAHLGD*STLVPD
Trigger: ATCGGGGACAAGAGTGGATCAATCTCCGAGATGGGC...GCCTGAGGCATCACTCTGGCCCATTGACAGATGAGAGGTCTGAAGCCTTCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR TCA 90 bp GTGTCTGAGGTCTGTGAACTCCCAGCCTCTCAGAACCCCATGGCAACACGACAATCTTCTTCATGCTGCTaGGGAGCTGGGGTGACCAGC +
Preference number: 4 (lower is better)
Translates to: VSEVCELPASQNPMATRQSSSCC*GAGVTS
Trigger: GCTGGTCACCCCAGCTCCTCAGCAGCATGAAGAAGA...TTGTCGTGTTGCCATGGGGTTCTGAGAGGCTGGGAGTTCACAGACCTCAGACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR TCA 90 bp GAGGGGAGGGGCAGTTCACATCGCAGCTCTCTCCGAACTCCACCATTTGGGACGTCTTCTTCGATGGCCTaGTCATCTGCTAGAGCAGCT +
Preference number: 4 (lower is better)
Translates to: EGRGSSHRSSLRTPPFGTSSSMA*SSARAA
Trigger: AGCTGCTCTAGCAGATGATCAGGCCATCGAAGAAGA...CGTCCCAAATGGTGGAGTTCGGAGAGAGCTGCGATGTGAACTGCCCCTCCCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR TCA 90 bp TTCAGGCTAGTAGCAAAGTTCAGGCAGTCCAACAGGTATGGGCGCCAGCAAGGAAGGAGAAGAGGGGCCTaGAATCCCACCTTGCTGGGG +
Preference number: 4 (lower is better)
Translates to: FRLVAKFRQSNRYGRQQGRRRGA*NPTLLG
Trigger: CCCCAGCAAGGTGGGATTTCAGGCCCCTCTTCTCCT...TCCTTGCTGGCGCCCATACCTGTTGGACTGCCTGAACTTTGCTACTAGCCTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR TCA 90 bp CCCCGCCGCGAGATGGGTCTGCTGCTGCCTCATCTGAGTAGGTGTAAGAGGGGAAGTTCAACGAGCTCTTaGTCTACCTCTGCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: PRREMGLLLPHLSRCKRGSSTSS*STSAAS
Trigger: AGAAGCTGCAGAGGTAGATCAAGAGCTCGTTGAACT...TCCCCTCTTACACCTACTCAGATGAGGCAGCAGCAGACCCATCTCGCGGCGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR TCA 90 bp GCTCGTCGGCGTAGGCTGCCGCAACCTCCTCCTCGGCTTTTCGCTCATAGTACTGTTTCCTTTCGGCAGTaGGGATTAGGACAGCTGAAC +
Preference number: 4 (lower is better)
Translates to: ARRRRLPQPPPRLFAHSTVSFRQ*GLGQLN
Trigger: GTTCAGCTGTCCTAATCCTCACTGCCGAAAGGAAAC...AGTACTATGAGCGAAAAGCCGAGGAGGAGGTTGCGGCAGCCTACGCCGACGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389900.8
CDS-3UTR TCA 90 bp TCTCCATCCACACTCCTACCCCAAACGGGCTTTGTGCTGCTCAATGGGGATTCGCCAGAGAGAGCATCTTaGACACTCCTGGCAAGGGGC +
Preference number: 4 (lower is better)
Translates to: SPSTLLPQTGFVLLNGDSPERAS*TLLARG
Trigger: GCCCCTTGCCAGGAGTGTTCAAGATGCTCTCTCTGG...CGAATCCCCATTGAGCAGCACAAAGCCCGTTTGGGGTAGGAGTGTGGATGGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000389900.8
ENST00000389902.8
ENST00000425013.6
CDS-3UTR TCA 90 bp CCCTTTGTCCTGCCTGGGGCTCTTGCTGGAGCCACGTGCCTAGGGTACAGGGCATTGTTTCTGTCAGGATaGCATCATCATCCAGGTCCT +
Preference number: 4 (lower is better)
Translates to: PFVLPGALAGATCLGYRALFLSG*HHHPGP
Trigger: AGGACCTGGATGATGATGTCATCCTGACAGAAACAA...TGCCCTGTACCCTAGGCACGTGGCTCCAGCAAGAGCCCCAGGCAGGACAAAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389902.8
CDS-3UTR TCA 90 bp ACCCTCCAAGGAAAGAGGCCGCCGCTCCTTCCCCACCAGCCCAGTGTGGCCAGATTGGGTCGTGATCTCTaGGGTTTATTTGTTTCTGTC +
Preference number: 4 (lower is better)
Translates to: TLQGKRPPLLPHQPSVARLGRDL*GLFVSV
Trigger: GACAGAAACAAATAAACCTCAGAGATCACGACCCAA...TCTGGCCACACTGGGCTGGTGGGGAAGGAGCGGCGGCCTCTTTCCTTGGAGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389902.8
CDS-3UTR GCA 90 bp CTCATCACCCAGGGTGGCAGAAACGTCTCCCCCAGCAGTTGGGCTGCCCAGCAGGACAATGTCATTTGCTaGTTGGTTATGACTCGGTCC +
Preference number: 4 (lower is better)
Translates to: LITQGGRNVSPSSWAAQQDNVIC*LVMTRS
Trigger: GGACCGAGTCATAACCAAGCAGCAAATGACATTGTC...CTGCTGGGCAGCCCAACTGCTGGGGGAGACGTTTCTGCCACCCTGGGTGATGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR GCA 90 bp TCTCTCCCCAATGCTGTCACTGGTCCAGGCAGGAGCCCGAGGTTCAGGCCCTGCACCTCTGCAGCTTCTTaGCCCCAAATGTTTTCCAAA +
Preference number: 4 (lower is better)
Translates to: SLPNAVTGPGRSPRFRPCTSAAS*PQMFSK
Trigger: TTTGGAAAACATTTGGGGGCAAGAAGCTGCAGAGGT...GCAGGGCCTGAACCTCGGGCTCCTGCCTGGACCAGTGACAGCATTGGGGAGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR GCA 90 bp TCTCTCCCCAATGCTGTCACTGGTCCAGGCAGGAGCCCGAGGTTCAGGCCCTGCTCCAGATCCAAAGACTaGCTCTTGGGCATATCTGAT +
Preference number: 4 (lower is better)
Translates to: SLPNAVTGPGRSPRFRPCSRSKD*LLGISD
Trigger: ATCAGATATGCCCAAGAGGCAGTCTTTGGATCTGGA...GCAGGGCCTGAACCTCGGGCTCCTGCCTGGACCAGTGACAGCATTGGGGAGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR GCA 90 bp GTGATGCCTGTGGCCAGGAAGGCTTCAGACCTCTCATCTGTCAATGGGCCAGAGTTGGGAACGAACACGTaGAGCTGCCTTCCATGCAGC +
Preference number: 4 (lower is better)
Translates to: VMPVARKASDLSSVNGPELGTNT*SCLPCS
Trigger: GCTGCATGGAAGGCAGCTGCACGTGTTCGTTCCCAA...CTCTGGCCCATTGACAGATGAGAGGTCTGAAGCCTTCCTGGCCACAGGCATCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR GCA 90 bp CAGGTTGTGCTCCAGGGGCATGTGGATGGGACCGAAGTCATAGTTGACCCGCACCACAGCGGCAAGACATaGGGTTGCAGCCTTCAGATT +
Preference number: 4 (lower is better)
Translates to: QVVLQGHVDGTEVIVDPHHSGKT*GCSLQI
Trigger: AATCTGAAGGCTGCAACCGCATGTCTTGCCGCTGTG...GTGCGGGTCAACTATGACTTCGGTCCCATCCACATGCCCCTGGAGCACAACCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389900.8
CDS-3UTR GCA 90 bp CCTTCAGATTTGATGAGGCCAGTCCCACACTTGTGGCATTTTCTAATGCGGGCAGGCCATCAGAAGCGATaGCGCGGCTGGGGGCCAAAG +
Preference number: 4 (lower is better)
Translates to: PSDLMRPVPHLWHFLMRAGHQKR*RGWGPK
Trigger: CTTTGGCCCCCAGCCGCGGCATCGCTTCTGATGGCC...TGCCCGCATTAGAAAATGCCACAAGTGTGGGACTGGCCTCATCAAATCTGAAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389900.8
CDS-3UTR GCA 90 bp ATGCAGCCCCACCCCAATGGTTGTCGGACTCAGCTGTGTCTGAGGTCTGTGAACAAACGGGCTTTGTGCTaGTCAATGGGGATTCGGGGC +
Preference number: 4 (lower is better)
Translates to: MQPHPNGCRTQLCLRSVNKRALC*SMGIRG
Trigger: GCCCCGAATCCCCATTGAGCAGCACAAAGCCCGTTT...GTTCACAGACCTCAGACACAGCTGAGTCCGACAACCATTGGGGTGGGGCTGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR GCA 90 bp GGGTTCTCCATCCACACTCCTACCCCAAACGGGCTTTGTGCTGCTCAATGGGGACCCAAACGGGCTTTGTaGTGCTCAATGGGGATTCGG +
Preference number: 4 (lower is better)
Translates to: GFSIHTPTPNGLCAAQWGPKRAL*CSMGIR
Trigger: CCGAATCCCCATTGAGCAGCACAAAGCCCGTTTGGG...TCCCCATTGAGCAGCACAAAGCCCGTTTGGGGTAGGAGTGTGGATGGAGAACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000389900.8
ENST00000389902.8
ENST00000425013.6
CDS-3UTR GCA 90 bp CTCTCCGAACTCCACCATTTGGGACGTCTTTATTATGGATCCGTCCACTCTTCCCCCCACCCTGAGCAATaGTTCCCAGGCCCGCAGGTG +
Preference number: 4 (lower is better)
Translates to: LSELHHLGRLYYGSVHSSPHPEQ*FPGPQV
Trigger: CACCTGCGGGCCTGGGAAGCATTGCTCAGGGTGGGG...GGAAGAGTGGACGGATCCATAATAAAGACGTCCCAAATGGTGGAGTTCGGAGAG
57% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR GCA 90 bp CCAGGAAGGCTTCAGACCTCTCATCTGTCAATGGGCCAGAGTGATGCCTCAGGCTGCTTCTCTCCCCAATaGTGTCACTGGTCCAGGCAG +
Preference number: 4 (lower is better)
Translates to: PGRLQTSHLSMGQSDASGCFSPQ*CHWSRQ
Trigger: CTGCCTGGACCAGTGACAGCATTGGGGAGAGAAGCA...GCCTGAGGCATCACTCTGGCCCATTGACAGATGAGAGGTCTGAAGCCTTCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR GCA 90 bp GGGTTCTCCATCCACACTCCTACCCCAAACGGGCTTTGTGCTGCTCAATGGGGATGCTTCTCTCCCCAATaGTGTCACTGGTCCAGGCAG +
Preference number: 4 (lower is better)
Translates to: GFSIHTPTPNGLCAAQWGCFSPQ*CHWSRQ
Trigger: CTGCCTGGACCAGTGACAGCATTGGGGAGAGAAGCA...TCCCCATTGAGCAGCACAAAGCCCGTTTGGGGTAGGAGTGTGGATGGAGAACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR GCA 90 bp GTGTCTGAGGTCTGTGAACTCCCAGCCTCTCAGAACCCCATGGCAACACGACAAAGAGAGGGAGCCAGCTaGCTCAGGGTTGCCTGTTGT +
Preference number: 4 (lower is better)
Translates to: VSEVCELPASQNPMATRQREGAS*LRVACC
Trigger: ACAACAGGCAACCCTGAGGCAGCTGGCTCCCTCTCT...TTGTCGTGTTGCCATGGGGTTCTGAGAGGCTGGGAGTTCACAGACCTCAGACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR CCA 90 bp CCCCGCCGCGAGATGGGTCTGCTGCTGCCTCATCTGAGTAGGTGTAAGAGGGGAAGCAGTCTTCTTCGATaGCCTGATCATCTGCTAGAG +
Preference number: 4 (lower is better)
Translates to: PRREMGLLLPHLSRCKRGSSLLR*PDHLLE
Trigger: CTCTAGCAGATGATCAGGCCATCGAAGAAGACTGCT...TCCCCTCTTACACCTACTCAGATGAGGCAGCAGCAGACCCATCTCGCGGCGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR CCA 90 bp GCTGGCTGGTCTGAAGACCCCCAGTGCTTCTCTCCCCAATGCTGTCACTGGTCCCGTCAGCTCCTCGAATaGAAATTCCCCATAGCAGCA +
Preference number: 4 (lower is better)
Translates to: AGWSEDPQCFSPQCCHWSRQLLE*KFPIAA
Trigger: TGCTGCTATGGGGAATTTCCATTCGAGGAGCTGACG...GGACCAGTGACAGCATTGGGGAGAGAAGCACTGGGGGTCTTCAGACCAGCCAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR CCA 90 bp AGGCTTCAGACCTCTCATCTGTCAATGGGCCAGAGTGATGCCTCAGGCACCGCTCTCCAGCTCACTGGTTaGGAACGAACACGTGCAGCT +
Preference number: 4 (lower is better)
Translates to: RLQTSHLSMGQSDASGTALQLTG*ERTRAA
Trigger: AGCTGCACGTGTTCGTTCCCAACCAGTGAGCTGGAG...AGCGGTGCCTGAGGCATCACTCTGGCCCATTGACAGATGAGAGGTCTGAAGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR CCA 90 bp GCTGGCTGGTCTGAAGACCCCCAGTGCTTCTCTCCCCAATGCTGTCACTGGTCCCCAGTCCCACACTTGTaGCATTTTCTAATGCGGGCA +
Preference number: 4 (lower is better)
Translates to: AGWSEDPQCFSPQCCHWSPVPHL*HFLMRA
Trigger: TGCCCGCATTAGAAAATGCCACAAGTGTGGGACTGG...GGACCAGTGACAGCATTGGGGAGAGAAGCACTGGGGGTCTTCAGACCAGCCAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR CCA 90 bp GAGGGGAGGGGCAGTTCACATCGCAGCTCTCTCCGAACTCCACCATTTGGGACGGGTGAGCGGGGATGTTaGCAGAAATGGTCATATCCA +
Preference number: 4 (lower is better)
Translates to: EGRGSSHRSSLRTPPFGTGERGC*QKWSYP
Trigger: TGGATATGACCATTTCTGCCAACATCCCCGCTCACC...CGTCCCAAATGGTGGAGTTCGGAGAGAGCTGCGATGTGAACTGCCCCTCCCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR CCA 90 bp GGGTTCTCCATCCACACTCCTACCCCAAACGGGCTTTGTGCTGCTCAATGGGGACATCTTGAACACTCCTaGCAAGGGGCTCCTGGTGAG +
Preference number: 4 (lower is better)
Translates to: GFSIHTPTPNGLCAAQWGHLEHS*QGAPGE
Trigger: CTCACCAGGAGCCCCTTGCCAGGAGTGTTCAAGATG...TCCCCATTGAGCAGCACAAAGCCCGTTTGGGGTAGGAGTGTGGATGGAGAACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000389900.8
ENST00000389902.8
ENST00000425013.6
CDS-3UTR CCA 90 bp TTCAGGCTAGTAGCAAAGTTCAGGCAGTCCAACAGGTATGGGCGCCAGCAAGGACGCGAAGGCATAGGGTaGCATCTGTGGCTGTGGCAG +
Preference number: 4 (lower is better)
Translates to: FRLVAKFRQSNRYGRQQGREGIG*HLWLWQ
Trigger: CTGCCACAGCCACAGATGCCACCCTATGCCTTCGCG...TCCTTGCTGGCGCCCATACCTGTTGGACTGCCTGAACTTTGCTACTAGCCTGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR CCA 90 bp CCAGGAAGGCTTCAGACCTCTCATCTGTCAATGGGCCAGAGTGATGCCTCAGGCTACAGACACCAGCCTTaGGGGAGGGTTCTCCATCCA +
Preference number: 4 (lower is better)
Translates to: PGRLQTSHLSMGQSDASGYRHQP*GRVLHP
Trigger: TGGATGGAGAACCCTCCCCCAAGGCTGGTGTCTGTA...GCCTGAGGCATCACTCTGGCCCATTGACAGATGAGAGGTCTGAAGCCTTCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR CCA 90 bp CCAGGAAGGCTTCAGACCTCTCATCTGTCAATGGGCCAGAGTGATGCCTCAGGCTCACATGGGGGATACTaGACAGCACCCTCTACCTGC +
Preference number: 4 (lower is better)
Translates to: PGRLQTSHLSMGQSDASGSHGGY*TAPSTC
Trigger: GCAGGTAGAGGGTGCTGTCCAGTATCCCCCATGTGA...GCCTGAGGCATCACTCTGGCCCATTGACAGATGAGAGGTCTGAAGCCTTCCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR CCA 90 bp GCTGGCTGGTCTGAAGACCCCCAGTGCTTCTCTCCCCAATGCTGTCACTGGTCCTGTGGCCAGAACAGCTaGAACTCCTCTCAAATGACC +
Preference number: 4 (lower is better)
Translates to: AGWSEDPQCFSPQCCHWSCGQNS*NSSQMT
Trigger: GGTCATTTGAGAGGAGTTCCAGCTGTTCTGGCCACA...GGACCAGTGACAGCATTGGGGAGAGAAGCACTGGGGGTCTTCAGACCAGCCAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR TCA 90 bp GCTCGTCGGCGTAGGCTGCCGCAACCTCCTCCTCGGCTTTTCGCTCATAGTACTCATCTTCTGTCAGGATaGCATCATCATCCAGGTCCT +
Preference number: 4 (lower is better)
Translates to: ARRRRLPQPPPRLFAHSTHLLSG*HHHPGP
Trigger: AGGACCTGGATGATGATGTCATCCTGACAGAAGATG...AGTACTATGAGCGAAAAGCCGAGGAGGAGGTTGCGGCAGCCTACGCCGACGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389900.8
CDS-3UTR TCA 90 bp GGGTTCTCCATCCACACTCCTACCCCAAACGGGCTTTGTGCTGCTCAATGGGGATTTGCTGCTTGGTTATaGCTCGGTCCAGGCTTGGGT +
Preference number: 4 (lower is better)
Translates to: GFSIHTPTPNGLCAAQWGFAAWL*LGPGLG
Trigger: ACCCAAGCCTGGACCGAGTCATAACCAAGCAGCAAA...TCCCCATTGAGCAGCACAAAGCCCGTTTGGGGTAGGAGTGTGGATGGAGAACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389900.8
ENST00000389902.8
ENST00000425013.6
CDS-3UTR TCA 90 bp ACCGAGGATGAGAAAGTTAGGCGGCAACAGAACAAAACCCCCGCCGCGAGATGGCCTGGGAATTCATGCTaGAACAACAAGCGGCCCAGT +
Preference number: 4 (lower is better)
Translates to: TEDEKVRRQQNKTPAARWPGNSC*NNKRPS
Trigger: ACTGGGCCGCTTGTTGTTTCAGCATGAATTCCCAGG...CCATCTCGCGGCGGGGGTTTTGTTCTGTTGCCGCCTAACTTTCTCATCCTCGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR TCA 90 bp GGTTTCCTTTCGGCAGTGAGGATTAGGACAGCTGAACCTCTTCACATCACTGTCTACAGGACGGGCACCTaGCAAGCTCGTCGGCGTAGG +
Preference number: 4 (lower is better)
Translates to: GFLSAVRIRTAEPLHITVYRTGT*QARRRR
Trigger: CCTACGCCGACGAGCTTGTCAGGTGCCCGTCCTGTA...GACAGTGATGTGAAGAGGTTCAGCTGTCCTAATCCTCACTGCCGAAAGGAAACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389900.8
CDS-3UTR TCA 90 bp TTCAGGCTAGTAGCAAAGTTCAGGCAGTCCAACAGGTATGGGCGCCAGCAAGGAGACCGAAGTCATAGTTaGCCCGCACGTTGGGCAGAG +
Preference number: 4 (lower is better)
Translates to: FRLVAKFRQSNRYGRQQGDRSHS*PARWAE
Trigger: CTCTGCCCAACGTGCGGGTCAACTATGACTTCGGTC...TCCTTGCTGGCGCCCATACCTGTTGGACTGCCTGAACTTTGCTACTAGCCTGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR TCA 90 bp CAGGTTGTGCTCCAGGGGCATGTGGATGGGACCGAAGTCATAGTTGACCCGCACGCCTACCCTTCAAGCTaGCTTAGGATGCAATGGTAC +
Preference number: 4 (lower is better)
Translates to: QVVLQGHVDGTEVIVDPHAYPSS*LRMQWY
Trigger: GTACCATTGCATCCTAAGTCAGCTTGAAGGGTAGGC...GTGCGGGTCAACTATGACTTCGGTCCCATCCACATGCCCCTGGAGCACAACCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389900.8
CDS-3UTR TCA 90 bp GTGATGCCTGTGGCCAGGAAGGCTTCAGACCTCTCATCTGTCAATGGGCCAGAGGAGCTGATGCTCAGCTaGCTCCATGAGAAGGGAAGT +
Preference number: 4 (lower is better)
Translates to: VMPVARKASDLSSVNGPEELMLS*LHEKGS
Trigger: ACTTCCCTTCTCATGGAGTCAGCTGAGCATCAGCTC...CTCTGGCCCATTGACAGATGAGAGGTCTGAAGCCTTCCTGGCCACAGGCATCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR TCA 90 bp CCTACCCTTCAAGCTGACTTAGGATGCAATGGTACAGACACCAGCCTTGGGGGACCTGCCTCAGCCTCCTaGGTACCTGGGATTATAGGC +
Preference number: 4 (lower is better)
Translates to: PTLQADLGCNGTDTSLGGPASAS*VPGIIG
Trigger: GCCTATAATCCCAGGTACTCAGGAGGCTGAGGCAGG...TCCCCCAAGGCTGGTGTCTGTACCATTGCATCCTAAGTCAGCTTGAAGGGTAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR GCA 90 bp CTGGATTTCCTCAATAAGCTTCTCATCATCTTCAGTGGGATCGGTCCAGAGAGACTCGTCGGCGTAGGCTaGCGCAACCTCCTCCTCGGC +
Preference number: 4 (lower is better)
Translates to: LDFLNKLLIIFSGIGPERLVGVG*RNLLLG
Trigger: GCCGAGGAGGAGGTTGCGGCAGCCTACGCCGACGAG...TCTCTCTGGACCGATCCCACTGAAGATGATGAGAAGCTTATTGAGGAAATCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389900.8
CDS-3UTR GCA 90 bp CAGCCTTCAGATTTGATGAGGCCAGTCCCACACTTGTGGCATTTTCTAATGCGGGGCTGGGGGCCAAAGTaGATGGGCAGGTTGTGCTCC +
Preference number: 4 (lower is better)
Translates to: QPSDLMRPVPHLWHFLMRGWGPK*MGRLCS
Trigger: GGAGCACAACCTGCCCATGCACTTTGGCCCCCAGCC...CCGCATTAGAAAATGCCACAAGTGTGGGACTGGCCTCATCAAATCTGAAGGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000389900.8
CDS-3UTR GCA 90 bp TCTCCATCCACACTCCTACCCCAAACGGGCTTTGTGCTGCTCAATGGGGATTCGAAACGGGCTTTGTGCTaGTCAATGGGGATTCGGGGC +
Preference number: 4 (lower is better)
Translates to: SPSTLLPQTGFVLLNGDSKRALC*SMGIRG
Trigger: GCCCCGAATCCCCATTGAGCAGCACAAAGCCCGTTT...CGAATCCCCATTGAGCAGCACAAAGCCCGTTTGGGGTAGGAGTGTGGATGGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000389900.8
ENST00000389902.8
ENST00000425013.6
CDS-3UTR GCA 90 bp TTCAGGCTAGTAGCAAAGTTCAGGCAGTCCAACAGGTATGGGCGCCAGCAAGGAGCCCTCAACACTCACTaGAGTGGCGCACGGGTTTTG +
Preference number: 4 (lower is better)
Translates to: FRLVAKFRQSNRYGRQQGALNTH*SGARVL
Trigger: CAAAACCCGTGCGCCACTGCAGTGAGTGTTGAGGGC...TCCTTGCTGGCGCCCATACCTGTTGGACTGCCTGAACTTTGCTACTAGCCTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR GCA 90 bp GTGATGCCTGTGGCCAGGAAGGCTTCAGACCTCTCATCTGTCAATGGGCCAGAGGGCCTCTGTCCCAGCTaGCTTAAGAGGCTCTTTCAA +
Preference number: 4 (lower is better)
Translates to: VMPVARKASDLSSVNGPEGLCPS*LKRLFQ
Trigger: TTGAAAGAGCCTCTTAAGGCAGCTGGGACAGAGGCC...CTCTGGCCCATTGACAGATGAGAGGTCTGAAGCCTTCCTGGCCACAGGCATCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR CCA 90 bp GCTCGTCGGCGTAGGCTGCCGCAACCTCCTCCTCGGCTTTTCGCTCATAGTACTTGGAAAAGCGGGCCCTaGGAATTCATGCTGAAACAA +
Preference number: 4 (lower is better)
Translates to: ARRRRLPQPPPRLFAHSTWKSGP*EFMLKQ
Trigger: TTGTTTCAGCATGAATTCCCAGGGCCCGCTTTTCCA...AGTACTATGAGCGAAAAGCCGAGGAGGAGGTTGCGGCAGCCTACGCCGACGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389900.8
CDS-3UTR CCA 90 bp GGTTTCCTTTCGGCAGTGAGGATTAGGACAGCTGAACCTCTTCACATCACTGTCCTGGGGTTCCGGCCTTaGAAAAGCGGGCCCTGGGAA +
Preference number: 4 (lower is better)
Translates to: GFLSAVRIRTAEPLHITVLGFRP*KSGPWE
Trigger: TTCCCAGGGCCCGCTTTTCCAAGGCCGGAACCCCAG...GACAGTGATGTGAAGAGGTTCAGCTGTCCTAATCCTCACTGCCGAAAGGAAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389900.8
CDS-3UTR CCA 90 bp AGGCTTCAGACCTCTCATCTGTCAATGGGCCAGAGTGATGCCTCAGGCACCGCTGAAATCCCACCTTGCTaGGGTTCCGGCCTTGGAAAA +
Preference number: 4 (lower is better)
Translates to: RLQTSHLSMGQSDASGTAEIPPC*GSGLGK
Trigger: TTTTCCAAGGCCGGAACCCCAGCAAGGTGGGATTTC...AGCGGTGCCTGAGGCATCACTCTGGCCCATTGACAGATGAGAGGTCTGAAGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR CCA 90 bp TCCAGCTCACTGGTTGGGAACGAACACGTGCAGCTGCCTTCCATGCAGCTGAGCTGGAAAGGCTGGACCTaGCTCTTCATCATCACTTGC +
Preference number: 4 (lower is better)
Translates to: SSSLVGNEHVQLPSMQLSWKGWT*LFIITC
Trigger: GCAAGTGATGATGAAGAGCCAGGTCCAGCCTTTCCA...GCTCAGCTGCATGGAAGGCAGCTGCACGTGTTCGTTCCCAACCAGTGAGCTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389900.8
CDS-3UTR CCA 90 bp TCTCCATCCACACTCCTACCCCAAACGGGCTTTGTGCTGCTCAATGGGGATTCGCTCCAGCTCACTGGTTaGGAACGAACACGTGCAGCT +
Preference number: 4 (lower is better)
Translates to: SPSTLLPQTGFVLLNGDSLQLTG*ERTRAA
Trigger: AGCTGCACGTGTTCGTTCCCAACCAGTGAGCTGGAG...CGAATCCCCATTGAGCAGCACAAAGCCCGTTTGGGGTAGGAGTGTGGATGGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389900.8
ENST00000389902.8
ENST00000425013.6
CDS-3UTR CCA 90 bp TCCAGCTCACTGGTTGGGAACGAACACGTGCAGCTGCCTTCCATGCAGCTGAGCGGTGAGCGGGGATGTTaGCAGAAATGGTCATATCCA +
Preference number: 4 (lower is better)
Translates to: SSSLVGNEHVQLPSMQLSGERGC*QKWSYP
Trigger: TGGATATGACCATTTCTGCCAACATCCCCGCTCACC...GCTCAGCTGCATGGAAGGCAGCTGCACGTGTTCGTTCCCAACCAGTGAGCTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389900.8
CDS-3UTR CCA 90 bp CAGCTCCTCGAATGGAAATTCCCCATAGCAGCAGCGACACTCAATCAGCTGGCCCATCTTGAACACTCCTaGCAAGGGGCTCCTGGTGAG +
Preference number: 4 (lower is better)
Translates to: QLLEWKFPIAAATLNQLAHLEHS*QGAPGE
Trigger: CTCACCAGGAGCCCCTTGCCAGGAGTGTTCAAGATG...GGCCAGCTGATTGAGTGTCGCTGCTGCTATGGGGAATTTCCATTCGAGGAGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389900.8
CDS-3UTR CCA 90 bp CAGGTTGTGCTCCAGGGGCATGTGGATGGGACCGAAGTCATAGTTGACCCGCACAGGCCCCATGTTGAGTaGGAAGTTGTTGAACACAGG +
Preference number: 4 (lower is better)
Translates to: QVVLQGHVDGTEVIVDPHRPHVE*EVVEHR
Trigger: CCTGTGTTCAACAACTTCCCACTCAACATGGGGCCT...GTGCGGGTCAACTATGACTTCGGTCCCATCCACATGCCCCTGGAGCACAACCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389900.8
CDS-3UTR CCA 90 bp CCAGGAAGGCTTCAGACCTCTCATCTGTCAATGGGCCAGAGTGATGCCTCAGGCCTTTGTGCTGCTCAATaGGGATTCGGGGCCATCAGA +
Preference number: 4 (lower is better)
Translates to: PGRLQTSHLSMGQSDASGLCAAQ*GFGAIR
Trigger: TCTGATGGCCCCGAATCCCCATTGAGCAGCACAAAG...GCCTGAGGCATCACTCTGGCCCATTGACAGATGAGAGGTCTGAAGCCTTCCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR CCA 90 bp TCCAGCTCACTGGTTGGGAACGAACACGTGCAGCTGCCTTCCATGCAGCTGAGCCTTCTAGGAAAGGGGTaGGAAGAAAACCAGCCTACC +
Preference number: 4 (lower is better)
Translates to: SSSLVGNEHVQLPSMQLSLLGKG*EENQPT
Trigger: GGTAGGCTGGTTTTCTTCCCACCCCTTTCCTAGAAG...GCTCAGCTGCATGGAAGGCAGCTGCACGTGTTCGTTCCCAACCAGTGAGCTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389900.8
CDS-3UTR CCA 90 bp ACAGCATCTTGGCCCTCACAGCTGTGGCAGTGCCTCTGCGGGCCATGGTCCCAGCCCATTTGCTACATCTaGAAATCTTGCTTCCGTTTC +
Preference number: 4 (lower is better)
Translates to: TASWPSQLWQCLCGPWSQPICYI*KSCFRF
Trigger: GAAACGGAAGCAAGATTTCCAGATGTAGCAAATGGG...CTGGGACCATGGCCCGCAGAGGCACTGCCACAGCTGTGAGGGCCAAGATGCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR CCA 90 bp GTGATGCCTGTGGCCAGGAAGGCTTCAGACCTCTCATCTGTCAATGGGCCAGAGGAAGTGACCTTCACATaGGGGATACTGGACAGCACC +
Preference number: 4 (lower is better)
Translates to: VMPVARKASDLSSVNGPEEVTFT*GILDST
Trigger: GGTGCTGTCCAGTATCCCCCATGTGAAGGTCACTTC...CTCTGGCCCATTGACAGATGAGAGGTCTGAAGCCTTCCTGGCCACAGGCATCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR CCA 90 bp CCAGGAAGGCTTCAGACCTCTCATCTGTCAATGGGCCAGAGTGATGCCTCAGGCCCTCTCATCTGTCAATaGGCCAGAGTGATGCCTCAG +
Preference number: 4 (lower is better)
Translates to: PGRLQTSHLSMGQSDASGPLICQ*ARVMPQ
Trigger: CTGAGGCATCACTCTGGCCCATTGACAGATGAGAGG...GCCTGAGGCATCACTCTGGCCCATTGACAGATGAGAGGTCTGAAGCCTTCCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR TCA 90 bp TCCAGCTCACTGGTTGGGAACGAACACGTGCAGCTGCCTTCCATGCAGCTGAGCTCGGATGACTGGTTCTaGGTTTCCAAAGGATCGCTT +
Preference number: 4 (lower is better)
Translates to: SSSLVGNEHVQLPSMQLSSDDWF*VSKGSL
Trigger: AAGCGATCCTTTGGAAACTCAGAACCAGTCATCCGA...GCTCAGCTGCATGGAAGGCAGCTGCACGTGTTCGTTCCCAACCAGTGAGCTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389900.8
CDS-3UTR TCA 90 bp CCGCAACCTCCTCCTCGGCTTTTCGCTCATAGTACTTATACAGGATGGTCTGGGTCAGGCTGCCGTTCCTaGGGAACGACCTGGTTTGTT +
Preference number: 4 (lower is better)
Translates to: PQPPPRLFAHSTYTGWSGSGCRS*GTTWFV
Trigger: AACAAACCAGGTCGTTCCTCAGGAACGGCAGCCTGA...CCCAGACCATCCTGTATAAGTACTATGAGCGAAAAGCCGAGGAGGAGGTTGCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389900.8
CDS-3UTR TCA 90 bp CCCCGCCGCGAGATGGGTCTGCTGCTGCCTCATCTGAGTAGGTGTAAGAGGGGATCCAAATTGGGCTCTTaGGATTCTTGCATTGGAAAG +
Preference number: 4 (lower is better)
Translates to: PRREMGLLLPHLSRCKRGSKLGS*DSCIGK
Trigger: CTTTCCAATGCAAGAATCTCAAGAGCCCAATTTGGA...TCCCCTCTTACACCTACTCAGATGAGGCAGCAGCAGACCCATCTCGCGGCGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR TCA 90 bp TCTCCATCCACACTCCTACCCCAAACGGGCTTTGTGCTGCTCAATGGGGATTCGTGCCTTCCATGCAGCTaGGCTCCAACTTTCCAGATC +
Preference number: 4 (lower is better)
Translates to: SPSTLLPQTGFVLLNGDSCLPCS*APTFQI
Trigger: GATCTGGAAAGTTGGAGCTCAGCTGCATGGAAGGCA...CGAATCCCCATTGAGCAGCACAAAGCCCGTTTGGGGTAGGAGTGTGGATGGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389900.8
ENST00000389902.8
ENST00000425013.6
CDS-3UTR TCA 90 bp GGGTTCTCCATCCACACTCCTACCCCAAACGGGCTTTGTGCTGCTCAATGGGGAGTTTCCTTTCGGCAGTaGGGATTAGGACAGCTGAAC +
Preference number: 4 (lower is better)
Translates to: GFSIHTPTPNGLCAAQWGVSFRQ*GLGQLN
Trigger: GTTCAGCTGTCCTAATCCTCACTGCCGAAAGGAAAC...TCCCCATTGAGCAGCACAAAGCCCGTTTGGGGTAGGAGTGTGGATGGAGAACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389900.8
ENST00000389902.8
ENST00000425013.6
CDS-3UTR TCA 90 bp GTGATGCCTGTGGCCAGGAAGGCTTCAGACCTCTCATCTGTCAATGGGCCAGAGTCTTTCCAGAGTCCCTaGCACTTCCTACAGGTTTCC +
Preference number: 4 (lower is better)
Translates to: VMPVARKASDLSSVNGPESFQSP*HFLQVS
Trigger: GGAAACCTGTAGGAAGTGTCAGGGACTCTGGAAAGA...CTCTGGCCCATTGACAGATGAGAGGTCTGAAGCCTTCCTGGCCACAGGCATCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR TCA 90 bp CCCTTTGTCCTGCCTGGGGCTCTTGCTGGAGCCACGTGCCTAGGGTACAGGGCATGGGTTGTTACACACTaGAAAATAGCTGCTCTTATC +
Preference number: 4 (lower is better)
Translates to: PFVLPGALAGATCLGYRAWVVTH*KIAALI
Trigger: GATAAGAGCAGCTATTTTTCAGTGTGTAACAACCCA...TGCCCTGTACCCTAGGCACGTGGCTCCAGCAAGAGCCCCAGGCAGGACAAAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389902.8
CDS-3UTR TCA 90 bp GGGTTCTCCATCCACACTCCTACCCCAAACGGGCTTTGTGCTGCTCAATGGGGAAAGGATTTCTCAGCCTaGCTTTCCAGAGACCGAGGA +
Preference number: 4 (lower is better)
Translates to: GFSIHTPTPNGLCAAQWGKDFSA*LSRDRG
Trigger: TCCTCGGTCTCTGGAAAGTCAGGCTGAGAAATCCTT...TCCCCATTGAGCAGCACAAAGCCCGTTTGGGGTAGGAGTGTGGATGGAGAACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR TCA 90 bp CTCTCCGAACTCCACCATTTGGGACGTCTTTATTATGGATCCGTCCACTCTTCCGGGTTGCCTGTTGTCTaGCCTGCTCTCTGGGCACTG +
Preference number: 4 (lower is better)
Translates to: LSELHHLGRLYYGSVHSSGLPVV*PALWAL
Trigger: CAGTGCCCAGAGAGCAGGTCAGACAACAGGCAACCC...GGAAGAGTGGACGGATCCATAATAAAGACGTCCCAAATGGTGGAGTTCGGAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR GCA 90 bp AACCTCCTCCTCGGCTTTTCGCTCATAGTACTTATACAGGATGGTCTGGGGGAGCCTGAAATCCCACCTTaGTGGGGTTCCGGCCTTGGA +
Preference number: 4 (lower is better)
Translates to: NLLLGFSLIVLIQDGLGEPEIPP*WGSGLG
Trigger: TCCAAGGCCGGAACCCCAGCAAGGTGGGATTTCAGG...CTCCCCCAGACCATCCTGTATAAGTACTATGAGCGAAAAGCCGAGGAGGAGGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000389900.8
CDS-3UTR GCA 90 bp GAGGGGAGGGGCAGTTCACATCGCAGCTCTCTCCGAACTCCACCATTTGGGACGACCTCTGCAGCTTCTTaGCCCCAAATGTTTTCCAAA +
Preference number: 4 (lower is better)
Translates to: EGRGSSHRSSLRTPPFGTTSAAS*PQMFSK
Trigger: TTTGGAAAACATTTGGGGGCAAGAAGCTGCAGAGGT...CGTCCCAAATGGTGGAGTTCGGAGAGAGCTGCGATGTGAACTGCCCCTCCCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR GCA 90 bp ACCCTCCAAGGAAAGAGGCCGCCGCTCCTTCCCCACCAGCCCAGTGTGGCCAGAAGCAAAAAGTCTTCATaGTCTGCCATCTCTTTGATT +
Preference number: 4 (lower is better)
Translates to: TLQGKRPPLLPHQPSVARSKKSS*SAISLI
Trigger: AATCAAAGAGATGGCAGAGCATGAAGACTTTTTGCT...TCTGGCCACACTGGGCTGGTGGGGAAGGAGCGGCGGCCTCTTTCCTTGGAGGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR GCA 90 bp TCTCCATCCACACTCCTACCCCAAACGGGCTTTGTGCTGCTCAATGGGGATTCGGGCCTCTGTCCCAGCTaGCTTAAGAGGCTCTTTCAA +
Preference number: 4 (lower is better)
Translates to: SPSTLLPQTGFVLLNGDSGLCPS*LKRLFQ
Trigger: TTGAAAGAGCCTCTTAAGGCAGCTGGGACAGAGGCC...CGAATCCCCATTGAGCAGCACAAAGCCCGTTTGGGGTAGGAGTGTGGATGGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR GCA 90 bp CTCTCCGAACTCCACCATTTGGGACGTCTTTATTATGGATCCGTCCACTCTTCCCTGCCGCATGGAGCCTaGCTTTCCAAGGCACTGTCG +
Preference number: 4 (lower is better)
Translates to: LSELHHLGRLYYGSVHSSLPHGA*LSKALS
Trigger: CGACAGTGCCTTGGAAAGGCAGGCTCCATGCGGCAG...GGAAGAGTGGACGGATCCATAATAAAGACGTCCCAAATGGTGGAGTTCGGAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR CCA 90 bp GTGTCTGAGGTCTGTGAACTCCCAGCCTCTCAGAACCCCATGGCAACACGACAAATGCTGCTGAGGAGCTaGGGTGACCAGCATTGGAAT +
Preference number: 4 (lower is better)
Translates to: VSEVCELPASQNPMATRQMLLRS*GDQHWN
Trigger: ATTCCAATGCTGGTCACCCCAGCTCCTCAGCAGCAT...TTGTCGTGTTGCCATGGGGTTCTGAGAGGCTGGGAGTTCACAGACCTCAGACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR CCA 90 bp GGGTTCTCCATCCACACTCCTACCCCAAACGGGCTTTGTGCTGCTCAATGGGGATGGAAAGGCTGGACCTaGCTCTTCATCATCACTTGC +
Preference number: 4 (lower is better)
Translates to: GFSIHTPTPNGLCAAQWGWKGWT*LFIITC
Trigger: GCAAGTGATGATGAAGAGCCAGGTCCAGCCTTTCCA...TCCCCATTGAGCAGCACAAAGCCCGTTTGGGGTAGGAGTGTGGATGGAGAACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389900.8
ENST00000389902.8
ENST00000425013.6
CDS-3UTR CCA 90 bp CCTACCCTTCAAGCTGACTTAGGATGCAATGGTACAGACACCAGCCTTGGGGGACTCTTGTTGCACAGCTaGAAGGAGAGCACGTCGGTC +
Preference number: 4 (lower is better)
Translates to: PTLQADLGCNGTDTSLGGLLLHS*KESTSV
Trigger: GACCGACGTGCTCTCCTTCCAGCTGTGCAACAAGAG...TCCCCCAAGGCTGGTGTCTGTACCATTGCATCCTAAGTCAGCTTGAAGGGTAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389900.8
ENST00000389902.8
ENST00000425013.6
CDS-3UTR CCA 90 bp TCTCCATCCACACTCCTACCCCAAACGGGCTTTGTGCTGCTCAATGGGGATTCGTTATACAGGATGGTCTaGGGGAGCACCTTCTCCAGC +
Preference number: 4 (lower is better)
Translates to: SPSTLLPQTGFVLLNGDSLYRMV*GSTFSS
Trigger: GCTGGAGAAGGTGCTCCCCCAGACCATCCTGTATAA...CGAATCCCCATTGAGCAGCACAAAGCCCGTTTGGGGTAGGAGTGTGGATGGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000389900.8
ENST00000389902.8
ENST00000425013.6
CDS-3UTR CCA 90 bp CTCTCCGAACTCCACCATTTGGGACGTCTTTATTATGGATCCGTCCACTCTTCCTGGCATCTGTGGCTGTaGCAGGTTCTGCGGAACGGG +
Preference number: 4 (lower is better)
Translates to: LSELHHLGRLYYGSVHSSWHLWL*QVLRNG
Trigger: CCCGTTCCGCAGAACCTGCCACAGCCACAGATGCCA...GGAAGAGTGGACGGATCCATAATAAAGACGTCCCAAATGGTGGAGTTCGGAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR CCA 90 bp CCAGGAAGGCTTCAGACCTCTCATCTGTCAATGGGCCAGAGTGATGCCTCAGGCCTTCTAGGAAAGGGGTaGGAAGAAAACCAGCCTACC +
Preference number: 4 (lower is better)
Translates to: PGRLQTSHLSMGQSDASGLLGKG*EENQPT
Trigger: GGTAGGCTGGTTTTCTTCCCACCCCTTTCCTAGAAG...GCCTGAGGCATCACTCTGGCCCATTGACAGATGAGAGGTCTGAAGCCTTCCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR CCA 90 bp CCAGGAAGGCTTCAGACCTCTCATCTGTCAATGGGCCAGAGTGATGCCTCAGGCTGTGGCCAGAACAGCTaGAACTCCTCTCAAATGACC +
Preference number: 4 (lower is better)
Translates to: PGRLQTSHLSMGQSDASGCGQNS*NSSQMT
Trigger: GGTCATTTGAGAGGAGTTCCAGCTGTTCTGGCCACA...GCCTGAGGCATCACTCTGGCCCATTGACAGATGAGAGGTCTGAAGCCTTCCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR TCA 90 bp GATCCTCCCTGGGGAAGCACAGGGAGCATATTTAAGGTACCGAAGACAATCCTGGCCCATCTCGGAGATTaGTCCACTCTTGTCCCCGAT +
Preference number: 4 (lower is better)
Translates to: DPPWGSTGSIFKVPKTILAHLGD*STLVPD
Trigger: ATCGGGGACAAGAGTGGATCAATCTCCGAGATGGGC...CAGGATTGTCTTCGGTACCTTAAATATGCTCCCTGTGCTTCCCCAGGGAGGATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR TCA 90 bp AACCTCCTCCTCGGCTTTTCGCTCATAGTACTTATACAGGATGGTCTGGGGGAGGCTGAGGAGCTGGGGTaGCCAGCATTGGAATCCTTT +
Preference number: 4 (lower is better)
Translates to: NLLLGFSLIVLIQDGLGEAEELG*PALESF
Trigger: AAAGGATTCCAATGCTGGTCACCCCAGCTCCTCAGC...CTCCCCCAGACCATCCTGTATAAGTACTATGAGCGAAAAGCCGAGGAGGAGGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000389900.8
CDS-3UTR TCA 90 bp GATCCTCCCTGGGGAAGCACAGGGAGCATATTTAAGGTACCGAAGACAATCCTGGCTGAGGAGCTGGGGTaGCCAGCATTGGAATCCTTT +
Preference number: 4 (lower is better)
Translates to: DPPWGSTGSIFKVPKTILAEELG*PALESF
Trigger: AAAGGATTCCAATGCTGGTCACCCCAGCTCCTCAGC...CAGGATTGTCTTCGGTACCTTAAATATGCTCCCTGTGCTTCCCCAGGGAGGATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR TCA 90 bp TGCACCTTCTCCACAGGCTTCTCCAGCGGGGGTCCAATGCGTTTGAAGGTGTTCGATGACTTTCTGCTCTaGTCTGGGGTTGACAATGTC +
Preference number: 4 (lower is better)
Translates to: CTFSTGFSSGGPMRLKVFDDFLL*SGVDNV
Trigger: GACATTGTCAACCCCAGATCAGAGCAGAAAGTCATC...GAACACCTTCAAACGCATTGGACCCCCGCTGGAGAAGCCTGTGGAGAAGGTGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389900.8
CDS-3UTR TCA 90 bp ATGCAGCCCCACCCCAATGGTTGTCGGACTCAGCTGTGTCTGAGGTCTGTGAACGATGACTTTCTGCTCTaGTCTGGGGTTGACAATGTC +
Preference number: 4 (lower is better)
Translates to: MQPHPNGCRTQLCLRSVNDDFLL*SGVDNV
Trigger: GACATTGTCAACCCCAGATCAGAGCAGAAAGTCATC...GTTCACAGACCTCAGACACAGCTGAGTCCGACAACCATTGGGGTGGGGCTGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR TCA 90 bp AGGCTTCAGACCTCTCATCTGTCAATGGGCCAGAGTGATGCCTCAGGCACCGCTTCGGATGACTGGTTCTaGGTTTCCAAAGGATCGCTT +
Preference number: 4 (lower is better)
Translates to: RLQTSHLSMGQSDASGTASDDWF*VSKGSL
Trigger: AAGCGATCCTTTGGAAACTCAGAACCAGTCATCCGA...AGCGGTGCCTGAGGCATCACTCTGGCCCATTGACAGATGAGAGGTCTGAAGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR TCA 90 bp GGGTTCTCCATCCACACTCCTACCCCAAACGGGCTTTGTGCTGCTCAATGGGGATCGGATGACTGGTTCTaGGTTTCCAAAGGATCGCTT +
Preference number: 4 (lower is better)
Translates to: GFSIHTPTPNGLCAAQWGSDDWF*VSKGSL
Trigger: AAGCGATCCTTTGGAAACTCAGAACCAGTCATCCGA...TCCCCATTGAGCAGCACAAAGCCCGTTTGGGGTAGGAGTGTGGATGGAGAACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389900.8
ENST00000389902.8
ENST00000425013.6
CDS-3UTR TCA 90 bp ATGGAAATTCCCCATAGCAGCAGCGACACTCAATCAGCTGGCCATCCTTTTGATAGGAGAAGAGGGGCCTaGAATCCCACCTTGCTGGGG +
Preference number: 4 (lower is better)
Translates to: MEIPHSSSDTQSAGHPFDRRRGA*NPTLLG
Trigger: CCCCAGCAAGGTGGGATTTCAGGCCCCTCTTCTCCT...ATCAAAAGGATGGCCAGCTGATTGAGTGTCGCTGCTGCTATGGGGAATTTCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000389900.8
CDS-3UTR TCA 90 bp CCAGGAAGGCTTCAGACCTCTCATCTGTCAATGGGCCAGAGTGATGCCTCAGGCAGTTCAACGAGCTCTTaGTCTACCTCTGCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: PGRLQTSHLSMGQSDASGSSTSS*STSAAS
Trigger: AGAAGCTGCAGAGGTAGATCAAGAGCTCGTTGAACT...GCCTGAGGCATCACTCTGGCCCATTGACAGATGAGAGGTCTGAAGCCTTCCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR TCA 90 bp TCTCCATCCACACTCCTACCCCAAACGGGCTTTGTGCTGCTCAATGGGGATTCGTCTTTCCAGAGTCCCTaGCACTTCCTACAGGTTTCC +
Preference number: 4 (lower is better)
Translates to: SPSTLLPQTGFVLLNGDSSFQSP*HFLQVS
Trigger: GGAAACCTGTAGGAAGTGTCAGGGACTCTGGAAAGA...CGAATCCCCATTGAGCAGCACAAAGCCCGTTTGGGGTAGGAGTGTGGATGGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389900.8
ENST00000389902.8
ENST00000425013.6
CDS-3UTR TCA 90 bp CAGCCTTCAGATTTGATGAGGCCAGTCCCACACTTGTGGCATTTTCTAATGCGGCCAGAGAGAGCATCTTaGACACTCCTGGCAAGGGGC +
Preference number: 4 (lower is better)
Translates to: QPSDLMRPVPHLWHFLMRPERAS*TLLARG
Trigger: GCCCCTTGCCAGGAGTGTTCAAGATGCTCTCTCTGG...CCGCATTAGAAAATGCCACAAGTGTGGGACTGGCCTCATCAAATCTGAAGGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389900.8
CDS-3UTR TCA 90 bp TCTCCATCCACACTCCTACCCCAAACGGGCTTTGTGCTGCTCAATGGGGATTCGGGGGTCCAATGCGTTTaGAGGTGTTCTCTCCATTCT +
Preference number: 4 (lower is better)
Translates to: SPSTLLPQTGFVLLNGDSGVQCV*RCSLHS
Trigger: AGAATGGAGAGAACACCTTCAAACGCATTGGACCCC...CGAATCCCCATTGAGCAGCACAAAGCCCGTTTGGGGTAGGAGTGTGGATGGAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000389900.8
ENST00000389902.8
ENST00000425013.6
CDS-3UTR TCA 90 bp GGTTTCCTTTCGGCAGTGAGGATTAGGACAGCTGAACCTCTTCACATCACTGTCGACCGAAGTCATAGTTaGCCCGCACGTTGGGCAGAG +
Preference number: 4 (lower is better)
Translates to: GFLSAVRIRTAEPLHITVDRSHS*PARWAE
Trigger: CTCTGCCCAACGTGCGGGTCAACTATGACTTCGGTC...GACAGTGATGTGAAGAGGTTCAGCTGTCCTAATCCTCACTGCCGAAAGGAAACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389900.8
CDS-3UTR TCA 90 bp CTCTCCGAACTCCACCATTTGGGACGTCTTTATTATGGATCCGTCCACTCTTCCGACCGAAGTCATAGTTaGCCCGCACGTTGGGCAGAG +
Preference number: 4 (lower is better)
Translates to: LSELHHLGRLYYGSVHSSDRSHS*PARWAE
Trigger: CTCTGCCCAACGTGCGGGTCAACTATGACTTCGGTC...GGAAGAGTGGACGGATCCATAATAAAGACGTCCCAAATGGTGGAGTTCGGAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR TCA 90 bp GATCCTCCCTGGGGAAGCACAGGGAGCATATTTAAGGTACCGAAGACAATCCTGTGCTGCTGCCTCATCTaGGTAGGTGTAAGAGGGGAG +
Preference number: 4 (lower is better)
Translates to: DPPWGSTGSIFKVPKTILCCCLI*VGVRGE
Trigger: CTCCCCTCTTACACCTACTCAGATGAGGCAGCAGCA...CAGGATTGTCTTCGGTACCTTAAATATGCTCCCTGTGCTTCCCCAGGGAGGATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR GCA 90 bp GAGGGGAGGGGCAGTTCACATCGCAGCTCTCTCCGAACTCCACCATTTGGGACGAAGATGATGACTTTCTaGTCTGATCTGGGGTTGACA +
Preference number: 4 (lower is better)
Translates to: EGRGSSHRSSLRTPPFGTKMMTF*SDLGLT
Trigger: TGTCAACCCCAGATCAGAGCAGAAAGTCATCATCTT...CGTCCCAAATGGTGGAGTTCGGAGAGAGCTGCGATGTGAACTGCCCCTCCCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR GCA 90 bp TCTCTCCCCAATGCTGTCACTGGTCCAGGCAGGAGCCCGAGGTTCAGGCCCTGCAAAGTCTTCATGCTCTaGCATCTCTTTGATTTTCTG +
Preference number: 4 (lower is better)
Translates to: SLPNAVTGPGRSPRFRPCKVFML*HLFDFL
Trigger: CAGAAAATCAAAGAGATGGCAGAGCATGAAGACTTT...GCAGGGCCTGAACCTCGGGCTCCTGCCTGGACCAGTGACAGCATTGGGGAGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR GCA 90 bp CCTACCCTTCAAGCTGACTTAGGATGCAATGGTACAGACACCAGCCTTGGGGGACACAGCGGCAAGACATaGGGTTGCAGCCTTCAGATT +
Preference number: 4 (lower is better)
Translates to: PTLQADLGCNGTDTSLGGHSGKT*GCSLQI
Trigger: AATCTGAAGGCTGCAACCGCATGTCTTGCCGCTGTG...TCCCCCAAGGCTGGTGTCTGTACCATTGCATCCTAAGTCAGCTTGAAGGGTAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389900.8
ENST00000389902.8
ENST00000425013.6
CDS-3UTR GCA 90 bp ACCGAGGATGAGAAAGTTAGGCGGCAACAGAACAAAACCCCCGCCGCGAGATGGGAGTTTTGCTTTTGTTaGTCAGGCTGGAGTGCAGTG +
Preference number: 4 (lower is better)
Translates to: TEDEKVRRQQNKTPAARWEFCFC*SGWSAV
Trigger: CACTGCACTCCAGCCTGAGCAACAAAAGCAAAACTC...CCATCTCGCGGCGGGGGTTTTGTTCTGTTGCCGCCTAACTTTCTCATCCTCGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR CCA 90 bp TGCACCTTCTCCACAGGCTTCTCCAGCGGGGGTCCAATGCGTTTGAAGGTGTTCAGCAGTCTTCTTCGATaGCCTGATCATCTGCTAGAG +
Preference number: 4 (lower is better)
Translates to: CTFSTGFSSGGPMRLKVFSSLLR*PDHLLE
Trigger: CTCTAGCAGATGATCAGGCCATCGAAGAAGACTGCT...GAACACCTTCAAACGCATTGGACCCCCGCTGGAGAAGCCTGTGGAGAAGGTGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389900.8
CDS-3UTR CCA 90 bp ACCGAGGATGAGAAAGTTAGGCGGCAACAGAACAAAACCCCCGCCGCGAGATGGTGGAAAAGCGGGCCCTaGGAATTCATGCTGAAACAA +
Preference number: 4 (lower is better)
Translates to: TEDEKVRRQQNKTPAARWWKSGP*EFMLKQ
Trigger: TTGTTTCAGCATGAATTCCCAGGGCCCGCTTTTCCA...CCATCTCGCGGCGGGGGTTTTGTTCTGTTGCCGCCTAACTTTCTCATCCTCGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR CCA 90 bp GGGTTCTCCATCCACACTCCTACCCCAAACGGGCTTTGTGCTGCTCAATGGGGATTGCATTGGAAAGGCTaGACCTGGCTCTTCATCATC +
Preference number: 4 (lower is better)
Translates to: GFSIHTPTPNGLCAAQWGLHWKG*TWLFII
Trigger: GATGATGAAGAGCCAGGTCCAGCCTTTCCAATGCAA...TCCCCATTGAGCAGCACAAAGCCCGTTTGGGGTAGGAGTGTGGATGGAGAACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389900.8
ENST00000389902.8
ENST00000425013.6
CDS-3UTR CCA 90 bp ACCGAGGATGAGAAAGTTAGGCGGCAACAGAACAAAACCCCCGCCGCGAGATGGTTGCATTGGAAAGGCTaGACCTGGCTCTTCATCATC +
Preference number: 4 (lower is better)
Translates to: TEDEKVRRQQNKTPAARWLHWKG*TWLFII
Trigger: GATGATGAAGAGCCAGGTCCAGCCTTTCCAATGCAA...CCATCTCGCGGCGGGGGTTTTGTTCTGTTGCCGCCTAACTTTCTCATCCTCGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR CCA 90 bp TGCACCTTCTCCACAGGCTTCTCCAGCGGGGGTCCAATGCGTTTGAAGGTGTTCTTGAGATTCTTGCATTaGAAAGGCTGGACCTGGCTC +
Preference number: 4 (lower is better)
Translates to: CTFSTGFSSGGPMRLKVFLRFLH*KGWTWL
Trigger: GAGCCAGGTCCAGCCTTTCCAATGCAAGAATCTCAA...GAACACCTTCAAACGCATTGGACCCCCGCTGGAGAAGCCTGTGGAGAAGGTGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389900.8
CDS-3UTR CCA 90 bp ATGCAGCCCCACCCCAATGGTTGTCGGACTCAGCTGTGTCTGAGGTCTGTGAACTTGAGATTCTTGCATTaGAAAGGCTGGACCTGGCTC +
Preference number: 4 (lower is better)
Translates to: MQPHPNGCRTQLCLRSVNLRFLH*KGWTWL
Trigger: GAGCCAGGTCCAGCCTTTCCAATGCAAGAATCTCAA...GTTCACAGACCTCAGACACAGCTGAGTCCGACAACCATTGGGGTGGGGCTGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR CCA 90 bp TCTCCATCCACACTCCTACCCCAAACGGGCTTTGTGCTGCTCAATGGGGATTCGCGTCAGCTCCTCGAATaGAAATTCCCCATAGCAGCA +
Preference number: 4 (lower is better)
Translates to: SPSTLLPQTGFVLLNGDSRQLLE*KFPIAA
Trigger: TGCTGCTATGGGGAATTTCCATTCGAGGAGCTGACG...CGAATCCCCATTGAGCAGCACAAAGCCCGTTTGGGGTAGGAGTGTGGATGGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000389900.8
ENST00000389902.8
ENST00000425013.6
CDS-3UTR CCA 90 bp GTAGGCTGCCGCAACCTCCTCCTCGGCTTTTCGCTCATAGTACTTATACAGGATCTCCAGCTCACTGGTTaGGAACGAACACGTGCAGCT +
Preference number: 4 (lower is better)
Translates to: VGCRNLLLGFSLIVLIQDLQLTG*ERTRAA
Trigger: AGCTGCACGTGTTCGTTCCCAACCAGTGAGCTGGAG...ATCCTGTATAAGTACTATGAGCGAAAAGCCGAGGAGGAGGTTGCGGCAGCCTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389900.8
CDS-3UTR CCA 90 bp AACCTCCTCCTCGGCTTTTCGCTCATAGTACTTATACAGGATGGTCTGGGGGAGCCTTCTCCAGCTCACTaGTTGGGAACGAACACGTGC +
Preference number: 4 (lower is better)
Translates to: NLLLGFSLIVLIQDGLGEPSPAH*LGTNTC
Trigger: GCACGTGTTCGTTCCCAACCAGTGAGCTGGAGAAGG...CTCCCCCAGACCATCCTGTATAAGTACTATGAGCGAAAAGCCGAGGAGGAGGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389900.8
CDS-3UTR CCA 90 bp GATCCTCCCTGGGGAAGCACAGGGAGCATATTTAAGGTACCGAAGACAATCCTGCCTTCTCCAGCTCACTaGTTGGGAACGAACACGTGC +
Preference number: 4 (lower is better)
Translates to: DPPWGSTGSIFKVPKTILPSPAH*LGTNTC
Trigger: GCACGTGTTCGTTCCCAACCAGTGAGCTGGAGAAGG...CAGGATTGTCTTCGGTACCTTAAATATGCTCCCTGTGCTTCCCCAGGGAGGATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR CCA 90 bp ACCGAGGATGAGAAAGTTAGGCGGCAACAGAACAAAACCCCCGCCGCGAGATGGAGTACTTATACAGGATaGTCTGGGGGAGCACCTTCT +
Preference number: 4 (lower is better)
Translates to: TEDEKVRRQQNKTPAARWSTYTG*SGGAPS
Trigger: AGAAGGTGCTCCCCCAGACCATCCTGTATAAGTACT...CCATCTCGCGGCGGGGGTTTTGTTCTGTTGCCGCCTAACTTTCTCATCCTCGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR CCA 90 bp CCAGGAAGGCTTCAGACCTCTCATCTGTCAATGGGCCAGAGTGATGCCTCAGGCGGGACGTCTTTATTATaGATCCGTCCACTCTTCCAG +
Preference number: 4 (lower is better)
Translates to: PGRLQTSHLSMGQSDASGGTSLL*IRPLFQ
Trigger: CTGGAAGAGTGGACGGATCCATAATAAAGACGTCCC...GCCTGAGGCATCACTCTGGCCCATTGACAGATGAGAGGTCTGAAGCCTTCCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR CCA 90 bp CCTACCCTTCAAGCTGACTTAGGATGCAATGGTACAGACACCAGCCTTGGGGGACCTCTCAGAACCCCATaGCAACACGACAAGGACAAG +
Preference number: 4 (lower is better)
Translates to: PTLQADLGCNGTDTSLGGPLRTP*QHDKDK
Trigger: CTTGTCCTTGTCGTGTTGCCATGGGGTTCTGAGAGG...TCCCCCAAGGCTGGTGTCTGTACCATTGCATCCTAAGTCAGCTTGAAGGGTAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
3UTR CAA 72 bp CCACAGCGGCAAGACATGCGGTTGCAGCCTTCAGATTaGATGAGGCCAGTCCCACACTTGTGGCATTTTCTA +
Preference number: 4 (lower is better)
Translates to: PQRQDMRLQPSD*MRPVPHLWHFL
Trigger: TAGAAAATGCCACAAGTGTGGGACTGGCCTCATCAAATCTGAAGGCTGCAACCGCATGTCTTGCCGCTGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389900.8
3UTR CAA 72 bp ACAGGGAGCATATTTAAGGTACCGAAGACAATCCTGTaGCTGCCGCATGGAGCCTGCCTTTCCAAGGCACTG +
Preference number: 4 (lower is better)
Translates to: TGSIFKVPKTIL*LPHGACLSKAL
Trigger: CAGTGCCTTGGAAAGGCAGGCTCCATGCGGCAGCAACAGGATTGTCTTCGGTACCTTAAATATGCTCCCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
3UTR CAA 72 bp GAGGAGTCAGATATGGTGATGGGCCCATCTCGGAGATaGATCCACTCTGTAATCCCAGCTACTCAGGAGGCT +
Preference number: 4 (lower is better)
Translates to: EESDMVMGPSRR*IHSVIPATQEA
Trigger: AGCCTCCTGAGTAGCTGGGATTACAGAGTGGATCAATCTCCGAGATGGGCCCATCACCATATCTGACTCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411812.1
CDS-3UTR TCA 90 bp ACCAGCATTGGAATCCTTTCCTCATCTGAGGAGTCAGATATGGTGATGGGCCCAGCTGAGGAGCTGGGGTaGCCAGCATTGGAATCCTTT +
Preference number: 4 (lower is better)
Translates to: TSIGILSSSEESDMVMGPAEELG*PALESF
Trigger: AAAGGATTCCAATGCTGGTCACCCCAGCTCCTCAGC...TGGGCCCATCACCATATCTGACTCCTCAGATGAGGAAAGGATTCCAATGCTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411812.1
CDS-3UTR TCA 90 bp TGCCTCTTGGGCATATCTGATGAGACACTCTTTGCAGAACAAGTGAGCATCTGCTCTTCTTCATGCTGCTaGGGAGCTGGGGTGACCAGC +
Preference number: 4 (lower is better)
Translates to: CLLGISDETLFAEQVSICSSSCC*GAGVTS
Trigger: GCTGGTCACCCCAGCTCCTCAGCAGCATGAAGAAGA...GCAGATGCTCACTTGTTCTGCAAAGAGTGTCTCATCAGATATGCCCAAGAGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389900.8
CDS-3UTR TCA 90 bp CCTACCCTTCAAGCTGACTTAGGATGCAATGGTACAGACACCAGCCTTGGGGGATCTTCTTCGATGGCCTaGTCATCTGCTAGAGCAGCT +
Preference number: 4 (lower is better)
Translates to: PTLQADLGCNGTDTSLGGSSSMA*SSARAA
Trigger: AGCTGCTCTAGCAGATGATCAGGCCATCGAAGAAGA...TCCCCCAAGGCTGGTGTCTGTACCATTGCATCCTAAGTCAGCTTGAAGGGTAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389900.8
ENST00000389902.8
ENST00000425013.6
CDS-3UTR TCA 90 bp CTCTCCGAACTCCACCATTTGGGACGTCTTTATTATGGATCCGTCCACTCTTCCTCAGGCTGCCGTTCCTaGGGAACGACCTGGTTTGTT +
Preference number: 4 (lower is better)
Translates to: LSELHHLGRLYYGSVHSSSGCRS*GTTWFV
Trigger: AACAAACCAGGTCGTTCCTCAGGAACGGCAGCCTGA...GGAAGAGTGGACGGATCCATAATAAAGACGTCCCAAATGGTGGAGTTCGGAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR TCA 90 bp CCGCAACCTCCTCCTCGGCTTTTCGCTCATAGTACTTATACAGGATGGTCTGGGTCTTTCCAGAGTCCCTaGCACTTCCTACAGGTTTCC +
Preference number: 4 (lower is better)
Translates to: PQPPPRLFAHSTYTGWSGSFQSP*HFLQVS
Trigger: GGAAACCTGTAGGAAGTGTCAGGGACTCTGGAAAGA...CCCAGACCATCCTGTATAAGTACTATGAGCGAAAAGCCGAGGAGGAGGTTGCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389900.8
CDS-3UTR TCA 90 bp GCTGGCTGGTCTGAAGACCCCCAGTGCTTCTCTCCCCAATGCTGTCACTGGTCCATAGCTGCTCTTATCTaGTTCAAATGCTGCTCTAGA +
Preference number: 4 (lower is better)
Translates to: AGWSEDPQCFSPQCCHWSIAALI*FKCCSR
Trigger: TCTAGAGCAGCATTTGAATCAGATAAGAGCAGCTAT...GGACCAGTGACAGCATTGGGGAGAGAAGCACTGGGGGTCTTCAGACCAGCCAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389902.8
CDS-3UTR GCA 90 bp TGCACCTTCTCCACAGGCTTCTCCAGCGGGGGTCCAATGCGTTTGAAGGTGTTCGACAATGTCATTTGCTaGTTGGTTATGACTCGGTCC +
Preference number: 4 (lower is better)
Translates to: CTFSTGFSSGGPMRLKVFDNVIC*LVMTRS
Trigger: GGACCGAGTCATAACCAAGCAGCAAATGACATTGTC...GAACACCTTCAAACGCATTGGACCCCCGCTGGAGAAGCCTGTGGAGAAGGTGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389900.8
CDS-3UTR GCA 90 bp CAGCCTTCAGATTTGATGAGGCCAGTCCCACACTTGTGGCATTTTCTAATGCGGCCCAAACGGGCTTTGTaGTGCTCAATGGGGATTCGG +
Preference number: 4 (lower is better)
Translates to: QPSDLMRPVPHLWHFLMRPKRAL*CSMGIR
Trigger: CCGAATCCCCATTGAGCAGCACAAAGCCCGTTTGGG...CCGCATTAGAAAATGCCACAAGTGTGGGACTGGCCTCATCAAATCTGAAGGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389900.8
CDS-3UTR CCA 90 bp GTGTCTGAGGTCTGTGAACTCCCAGCCTCTCAGAACCCCATGGCAACACGACAATTGAGATTCTTGCATTaGAAAGGCTGGACCTGGCTC +
Preference number: 4 (lower is better)
Translates to: VSEVCELPASQNPMATRQLRFLH*KGWTWL
Trigger: GAGCCAGGTCCAGCCTTTCCAATGCAAGAATCTCAA...TTGTCGTGTTGCCATGGGGTTCTGAGAGGCTGGGAGTTCACAGACCTCAGACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR CCA 90 bp GATGAGACACTCTTTGCAGAACAAGTGAGCATCTGCGCACTGCGTCAGCTCCTCTCTCATCATCTTCAGTaGGATCGGTCCAGAGAGAGC +
Preference number: 4 (lower is better)
Translates to: DETLFAEQVSICALRQLLSHHLQ*DRSRES
Trigger: GCTCTCTCTGGACCGATCCCACTGAAGATGATGAGA...GAGGAGCTGACGCAGTGCGCAGATGCTCACTTGTTCTGCAAAGAGTGTCTCATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389900.8
CDS-3UTR CCA 90 bp GTCATATCCATTAATAGAAACTCGACAGAGGTAGCACATCTGGGCACCACAGCGATAGGGTGGCATCTGTaGCTGTGGCAGGTTCTGCGG +
Preference number: 4 (lower is better)
Translates to: VISINRNSTEVAHLGTTAIGWHL*LWQVLR
Trigger: CCGCAGAACCTGCCACAGCCACAGATGCCACCCTAT...CGCTGTGGTGCCCAGATGTGCTACCTCTGTCGAGTTTCTATTAATGGATATGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389900.8
CDS-3UTR CCA 90 bp CTCTCCGAACTCCACCATTTGGGACGTCTTTATTATGGATCCGTCCACTCTTCCCAACACTCACTGCAGTaGCGCACGGGTTTTGGATGG +
Preference number: 4 (lower is better)
Translates to: LSELHHLGRLYYGSVHSSQHSLQ*RTGFGW
Trigger: CCATCCAAAACCCGTGCGCCACTGCAGTGAGTGTTG...GGAAGAGTGGACGGATCCATAATAAAGACGTCCCAAATGGTGGAGTTCGGAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR CCA 90 bp GATCCTCCCTGGGGAAGCACAGGGAGCATATTTAAGGTACCGAAGACAATCCTGCCTCTCATCTGTCAATaGGCCAGAGTGATGCCTCAG +
Preference number: 4 (lower is better)
Translates to: DPPWGSTGSIFKVPKTILPLICQ*ARVMPQ
Trigger: CTGAGGCATCACTCTGGCCCATTGACAGATGAGAGG...CAGGATTGTCTTCGGTACCTTAAATATGCTCCCTGTGCTTCCCCAGGGAGGATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR TCA 90 bp CCTTCAGATTTGATGAGGCCAGTCCCACACTTGTGGCATTTTCTAATGCGGGCAAGGAGTCAGATATGGTaGTGGGCCCATCTCGGAGAT +
Preference number: 4 (lower is better)
Translates to: PSDLMRPVPHLWHFLMRARSQIW*WAHLGD
Trigger: ATCTCCGAGATGGGCCCATCACCATATCTGACTCCT...TGCCCGCATTAGAAAATGCCACAAGTGTGGGACTGGCCTCATCAAATCTGAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389900.8
CDS-3UTR TCA 90 bp CCAGGAAGGCTTCAGACCTCTCATCTGTCAATGGGCCAGAGTGATGCCTCAGGCTCCAAATTGGGCTCTTaGGATTCTTGCATTGGAAAG +
Preference number: 4 (lower is better)
Translates to: PGRLQTSHLSMGQSDASGSKLGS*DSCIGK
Trigger: CTTTCCAATGCAAGAATCTCAAGAGCCCAATTTGGA...GCCTGAGGCATCACTCTGGCCCATTGACAGATGAGAGGTCTGAAGCCTTCCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR TCA 90 bp CCTACCCTTCAAGCTGACTTAGGATGCAATGGTACAGACACCAGCCTTGGGGGAAGTTCAACGAGCTCTTaGTCTACCTCTGCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: PTLQADLGCNGTDTSLGGSSTSS*STSAAS
Trigger: AGAAGCTGCAGAGGTAGATCAAGAGCTCGTTGAACT...TCCCCCAAGGCTGGTGTCTGTACCATTGCATCCTAAGTCAGCTTGAAGGGTAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389900.8
ENST00000389902.8
ENST00000425013.6
CDS-3UTR TCA 90 bp GATGAGACACTCTTTGCAGAACAAGTGAGCATCTGCGCACTGCGTCAGCTCCTCGGTCTAGAAAGGTCTTaGGAGATCTGGTTCTCTGTC +
Preference number: 4 (lower is better)
Translates to: DETLFAEQVSICALRQLLGLERS*EIWFSV
Trigger: GACAGAGAACCAGATCTCTCAAGACCTTTCTAGACC...GAGGAGCTGACGCAGTGCGCAGATGCTCACTTGTTCTGCAAAGAGTGTCTCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389900.8
CDS-3UTR TCA 90 bp AGGCTTCAGACCTCTCATCTGTCAATGGGCCAGAGTGATGCCTCAGGCACCGCTAGCTGGCCATCCTTTTaGTACTGTTCTTCATTCATC +
Preference number: 4 (lower is better)
Translates to: RLQTSHLSMGQSDASGTASWPSF*YCSSFI
Trigger: GATGAATGAAGAACAGTATCAAAAGGATGGCCAGCT...AGCGGTGCCTGAGGCATCACTCTGGCCCATTGACAGATGAGAGGTCTGAAGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR TCA 90 bp GATCCTCCCTGGGGAAGCACAGGGAGCATATTTAAGGTACCGAAGACAATCCTGGCCTACCCTTCAAGCTaGCTTAGGATGCAATGGTAC +
Preference number: 4 (lower is better)
Translates to: DPPWGSTGSIFKVPKTILAYPSS*LRMQWY
Trigger: GTACCATTGCATCCTAAGTCAGCTTGAAGGGTAGGC...CAGGATTGTCTTCGGTACCTTAAATATGCTCCCTGTGCTTCCCCAGGGAGGATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR TCA 90 bp GGGTTCTCCATCCACACTCCTACCCCAAACGGGCTTTGTGCTGCTCAATGGGGAGATGAGATTGGGTCGTaGTCTCTGAGGTTTATTTGT +
Preference number: 4 (lower is better)
Translates to: GFSIHTPTPNGLCAAQWGDEIGS*SLRFIC
Trigger: ACAAATAAACCTCAGAGATCACGACCCAATCTCATC...TCCCCATTGAGCAGCACAAAGCCCGTTTGGGGTAGGAGTGTGGATGGAGAACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389902.8
CDS-3UTR TCA 90 bp TCTCGGAGATTGATCCACTCTGTAATCCCAGCTACTCAGGAGGCTCAGACCGGACTCTGGCCTGGGCAATaGGTAAAATTCCATCTTGTC +
Preference number: 4 (lower is better)
Translates to: SRRLIHSVIPATQEAQTGLWPGQ*VKFHLV
Trigger: GACAAGATGGAATTTTACTCATTGCCCAGGCCAGAG...TCCGGTCTGAGCCTCCTGAGTAGCTGGGATTACAGAGTGGATCAATCTCCGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411812.1
CDS-3UTR GCA 90 bp TCTCCATCCACACTCCTACCCCAAACGGGCTTTGTGCTGCTCAATGGGGATTCGGACAATGTCATTTGCTaGTTGGTTATGACTCGGTCC +
Preference number: 4 (lower is better)
Translates to: SPSTLLPQTGFVLLNGDSDNVIC*LVMTRS
Trigger: GGACCGAGTCATAACCAAGCAGCAAATGACATTGTC...CGAATCCCCATTGAGCAGCACAAAGCCCGTTTGGGGTAGGAGTGTGGATGGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389900.8
ENST00000389902.8
ENST00000425013.6
CDS-3UTR GCA 90 bp ATGCAGCCCCACCCCAATGGTTGTCGGACTCAGCTGTGTCTGAGGTCTGTGAACGTTGACAATGTCATTTaGTGCTTGGTTATGACTCGG +
Preference number: 4 (lower is better)
Translates to: MQPHPNGCRTQLCLRSVNVDNVI*CLVMTR
Trigger: CCGAGTCATAACCAAGCAGCAAATGACATTGTCAAC...GTTCACAGACCTCAGACACAGCTGAGTCCGACAACCATTGGGGTGGGGCTGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR GCA 90 bp CCAGGAAGGCTTCAGACCTCTCATCTGTCAATGGGCCAGAGTGATGCCTCAGGCAAGATGATGACTTTCTaGTCTGATCTGGGGTTGACA +
Preference number: 4 (lower is better)
Translates to: PGRLQTSHLSMGQSDASGKMMTF*SDLGLT
Trigger: TGTCAACCCCAGATCAGAGCAGAAAGTCATCATCTT...GCCTGAGGCATCACTCTGGCCCATTGACAGATGAGAGGTCTGAAGCCTTCCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR GCA 90 bp CAGCTCCTCGAATGGAAATTCCCCATAGCAGCAGCGACACTCAATCAGCTGGCCACCTCTGCAGCTTCTTaGCCCCAAATGTTTTCCAAA +
Preference number: 4 (lower is better)
Translates to: QLLEWKFPIAAATLNQLATSAAS*PQMFSK
Trigger: TTTGGAAAACATTTGGGGGCAAGAAGCTGCAGAGGT...GGCCAGCTGATTGAGTGTCGCTGCTGCTATGGGGAATTTCCATTCGAGGAGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000389900.8
CDS-3UTR GCA 90 bp TGCCTCTTGGGCATATCTGATGAGACACTCTTTGCAGAACAAGTGAGCATCTGCGAACAAGTGAGCATCTaGGCACTGCGTCAGCTCCTC +
Preference number: 4 (lower is better)
Translates to: CLLGISDETLFAEQVSICEQVSI*ALRQLL
Trigger: GAGGAGCTGACGCAGTGCGCAGATGCTCACTTGTTC...GCAGATGCTCACTTGTTCTGCAAAGAGTGTCTCATCAGATATGCCCAAGAGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389900.8
CDS-3UTR CCA 90 bp CCTACCCTTCAAGCTGACTTAGGATGCAATGGTACAGACACCAGCCTTGGGGGACCAAAGACTGCCTCTTaGGCATATCTGATGAGACAC +
Preference number: 4 (lower is better)
Translates to: PTLQADLGCNGTDTSLGGPKTAS*AYLMRH
Trigger: GTGTCTCATCAGATATGCCCAAGAGGCAGTCTTTGG...TCCCCCAAGGCTGGTGTCTGTACCATTGCATCCTAAGTCAGCTTGAAGGGTAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389900.8
ENST00000389902.8
ENST00000425013.6
CDS-3UTR CCA 90 bp CCTACCCTTCAAGCTGACTTAGGATGCAATGGTACAGACACCAGCCTTGGGGGAAGTACTTATACAGGATaGTCTGGGGGAGCACCTTCT +
Preference number: 4 (lower is better)
Translates to: PTLQADLGCNGTDTSLGGSTYTG*SGGAPS
Trigger: AGAAGGTGCTCCCCCAGACCATCCTGTATAAGTACT...TCCCCCAAGGCTGGTGTCTGTACCATTGCATCCTAAGTCAGCTTGAAGGGTAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000389900.8
ENST00000389902.8
ENST00000425013.6
CDS-3UTR CCA 90 bp ATAGCAGCAGCGACACTCAATCAGCTGGCCATCCTTTTGATACTGTTCTTCATTCGCGAAGGCATAGGGTaGCATCTGTGGCTGTGGCAG +
Preference number: 4 (lower is better)
Translates to: IAAATLNQLAILLILFFIREGIG*HLWLWQ
Trigger: CTGCCACAGCCACAGATGCCACCCTATGCCTTCGCG...AATGAAGAACAGTATCAAAAGGATGGCCAGCTGATTGAGTGTCGCTGCTGCTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389900.8
CDS-3UTR CCA 90 bp GATCCTCCCTGGGGAAGCACAGGGAGCATATTTAAGGTACCGAAGACAATCCTGAGGCCCCATGTTGAGTaGGAAGTTGTTGAACACAGG +
Preference number: 4 (lower is better)
Translates to: DPPWGSTGSIFKVPKTILRPHVE*EVVEHR
Trigger: CCTGTGTTCAACAACTTCCCACTCAACATGGGGCCT...CAGGATTGTCTTCGGTACCTTAAATATGCTCCCTGTGCTTCCCCAGGGAGGATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR CCA 90 bp CCTTCAGATTTGATGAGGCCAGTCCCACACTTGTGGCATTTTCTAATGCGGGCACTTTGTGCTGCTCAATaGGGATTCGGGGCCATCAGA +
Preference number: 4 (lower is better)
Translates to: PSDLMRPVPHLWHFLMRALCAAQ*GFGAIR
Trigger: TCTGATGGCCCCGAATCCCCATTGAGCAGCACAAAG...TGCCCGCATTAGAAAATGCCACAAGTGTGGGACTGGCCTCATCAAATCTGAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389900.8
CDS-3UTR CCA 90 bp CCTACCCTTCAAGCTGACTTAGGATGCAATGGTACAGACACCAGCCTTGGGGGAGGGACGTCTTTATTATaGATCCGTCCACTCTTCCAG +
Preference number: 4 (lower is better)
Translates to: PTLQADLGCNGTDTSLGGGTSLL*IRPLFQ
Trigger: CTGGAAGAGTGGACGGATCCATAATAAAGACGTCCC...TCCCCCAAGGCTGGTGTCTGTACCATTGCATCCTAAGTCAGCTTGAAGGGTAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR CCA 90 bp ACAAAAGTCCCAGTTACATATGATACAGGCTTTTTACACACAGTAGTTGAAACGAGAGGGGGCTGTGGCTaGGGAGCCTCACGCCCTGCG +
Preference number: 4 (lower is better)
Translates to: TKVPVTYDTGFLHTVVETRGGCG*GASRPA
Trigger: CGCAGGGCGTGAGGCTCCCCAGCCACAGCCCCCTCT...CGTTTCAACTACTGTGTGTAAAAAGCCTGTATCATATGTAACTGGGACTTTTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
3UTR CAA 72 bp GCAGTTCACATCGCAGCTCTCTCCGAACTCCACCATTaGGGACGTCTTTATTATGGATCCGTCCACTCTTCC +
Preference number: 4 (lower is better)
Translates to: AVHIAALSELHH*GRLYYGSVHSS
Trigger: GGAAGAGTGGACGGATCCATAATAAAGACGTCCCAAATGGTGGAGTTCGGAGAGAGCTGCGATGTGAACTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR TCA 90 bp ATGGAAATTCCCCATAGCAGCAGCGACACTCAATCAGCTGGCCATCCTTTTGATTCTTTGCAGAACAAGTaGGCATCTGCGCACTGCGTC +
Preference number: 4 (lower is better)
Translates to: MEIPHSSSDTQSAGHPFDSLQNK*ASAHCV
Trigger: GACGCAGTGCGCAGATGCTCACTTGTTCTGCAAAGA...ATCAAAAGGATGGCCAGCTGATTGAGTGTCGCTGCTGCTATGGGGAATTTCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389900.8
CDS-3UTR TCA 90 bp CCTTCAGATTTGATGAGGCCAGTCCCACACTTGTGGCATTTTCTAATGCGGGCAGGGGTCCAATGCGTTTaGAGGTGTTCTCTCCATTCT +
Preference number: 4 (lower is better)
Translates to: PSDLMRPVPHLWHFLMRAGVQCV*RCSLHS
Trigger: AGAATGGAGAGAACACCTTCAAACGCATTGGACCCC...TGCCCGCATTAGAAAATGCCACAAGTGTGGGACTGGCCTCATCAAATCTGAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389900.8
CDS-3UTR TCA 90 bp CCTACCCTTCAAGCTGACTTAGGATGCAATGGTACAGACACCAGCCTTGGGGGATCCTTGAAATACATCTaGGAAGCCAATGGCAGCGAA +
Preference number: 4 (lower is better)
Translates to: PTLQADLGCNGTDTSLGGSLKYI*EANGSE
Trigger: TTCGCTGCCATTGGCTTCTCAGATGTATTTCAAGGA...TCCCCCAAGGCTGGTGTCTGTACCATTGCATCCTAAGTCAGCTTGAAGGGTAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR GCA 90 bp CAGCTCCTCGAATGGAAATTCCCCATAGCAGCAGCGACACTCAATCAGCTGGCCAAGATGATGACTTTCTaGTCTGATCTGGGGTTGACA +
Preference number: 4 (lower is better)
Translates to: QLLEWKFPIAAATLNQLAKMMTF*SDLGLT
Trigger: TGTCAACCCCAGATCAGAGCAGAAAGTCATCATCTT...GGCCAGCTGATTGAGTGTCGCTGCTGCTATGGGGAATTTCCATTCGAGGAGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389900.8
CDS-3UTR GCA 90 bp CAGCCTTCAGATTTGATGAGGCCAGTCCCACACTTGTGGCATTTTCTAATGCGGAACTCCTGCTCTTGTTaGACAGCTGGAAGGAGAGCA +
Preference number: 4 (lower is better)
Translates to: QPSDLMRPVPHLWHFLMRNSCSC*TAGRRA
Trigger: TGCTCTCCTTCCAGCTGTGCAACAAGAGCAGGAGTT...CCGCATTAGAAAATGCCACAAGTGTGGGACTGGCCTCATCAAATCTGAAGGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389900.8
CDS-3UTR CCA 90 bp TGCCTCTTGGGCATATCTGATGAGACACTCTTTGCAGAACAAGTGAGCATCTGCATGCTGCTGAGGAGCTaGGGTGACCAGCATTGGAAT +
Preference number: 4 (lower is better)
Translates to: CLLGISDETLFAEQVSICMLLRS*GDQHWN
Trigger: ATTCCAATGCTGGTCACCCCAGCTCCTCAGCAGCAT...GCAGATGCTCACTTGTTCTGCAAAGAGTGTCTCATCAGATATGCCCAAGAGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389900.8
CDS-3UTR CCA 90 bp GTGTCTGAGGTCTGTGAACTCCCAGCCTCTCAGAACCCCATGGCAACACGACAACCGAACTCCACCATTTaGGACGTCTTTATTATGGAT +
Preference number: 4 (lower is better)
Translates to: VSEVCELPASQNPMATRQPNSTI*DVFIMD
Trigger: ATCCATAATAAAGACGTCCCAAATGGTGGAGTTCGG...TTGTCGTGTTGCCATGGGGTTCTGAGAGGCTGGGAGTTCACAGACCTCAGACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR TCA 90 bp AAGATCCAGAAATTCACCGTAGTCATCCTCAGAATCATCTTCTGTCAGGATGACTCTTCTTCATGCTGCTaGGGAGCTGGGGTGACCAGC +
Preference number: 4 (lower is better)
Translates to: KIQKFTVVILRIIFCQDDSSSCC*GAGVTS
Trigger: GCTGGTCACCCCAGCTCCTCAGCAGCATGAAGAAGA...GTCATCCTGACAGAAGATGATTCTGAGGATGACTACGGTGAATTTCTGGATCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411812.1
CDS-3UTR TCA 90 bp CTGGATTTCCTCAATAAGCTTCTCATCATCTTCAGTGGGATCGGTCCAGAGAGACCTGGGAATTCATGCTaGAACAACAAGCGGCCCAGT +
Preference number: 4 (lower is better)
Translates to: LDFLNKLLIIFSGIGPERPGNSC*NNKRPS
Trigger: ACTGGGCCGCTTGTTGTTTCAGCATGAATTCCCAGG...TCTCTCTGGACCGATCCCACTGAAGATGATGAGAAGCTTATTGAGGAAATCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389900.8
CDS-3UTR TCA 90 bp CCGCAACCTCCTCCTCGGCTTTTCGCTCATAGTACTTATACAGGATGGTCTGGGAGCTGGCCATCCTTTTaGTACTGTTCTTCATTCATC +
Preference number: 4 (lower is better)
Translates to: PQPPPRLFAHSTYTGWSGSWPSF*YCSSFI
Trigger: GATGAATGAAGAACAGTATCAAAAGGATGGCCAGCT...CCCAGACCATCCTGTATAAGTACTATGAGCGAAAAGCCGAGGAGGAGGTTGCGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389900.8
CDS-3UTR TCA 90 bp TTCAGGCTAGTAGCAAAGTTCAGGCAGTCCAACAGGTATGGGCGCCAGCAAGGAAGCTGGCCATCCTTTTaGTACTGTTCTTCATTCATC +
Preference number: 4 (lower is better)
Translates to: FRLVAKFRQSNRYGRQQGSWPSF*YCSSFI
Trigger: GATGAATGAAGAACAGTATCAAAAGGATGGCCAGCT...TCCTTGCTGGCGCCCATACCTGTTGGACTGCCTGAACTTTGCTACTAGCCTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR TCA 90 bp GTGTCTGAGGTCTGTGAACTCCCAGCCTCTCAGAACCCCATGGCAACACGACAAAGTCCCAGTTACATATaGTACAGGCTTTTTACACAC +
Preference number: 4 (lower is better)
Translates to: VSEVCELPASQNPMATRQSPSYI*YRLFTH
Trigger: GTGTGTAAAAAGCCTGTATCATATGTAACTGGGACT...TTGTCGTGTTGCCATGGGGTTCTGAGAGGCTGGGAGTTCACAGACCTCAGACAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR GCA 90 bp CTCTCCGAACTCCACCATTTGGGACGTCTTTATTATGGATCCGTCCACTCTTCCCAAGCTGACTTAGGATaGAATGGTACAGACACCAGC +
Preference number: 4 (lower is better)
Translates to: LSELHHLGRLYYGSVHSSQADLG*NGTDTS
Trigger: GCTGGTGTCTGTACCATTGCATCCTAAGTCAGCTTG...GGAAGAGTGGACGGATCCATAATAAAGACGTCCCAAATGGTGGAGTTCGGAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR CCA 90 bp ATAGCAGCAGCGACACTCAATCAGCTGGCCATCCTTTTGATACTGTTCTTCATTTACAGACACCAGCCTTaGGGGAGGGTTCTCCATCCA +
Preference number: 4 (lower is better)
Translates to: IAAATLNQLAILLILFFIYRHQP*GRVLHP
Trigger: TGGATGGAGAACCCTCCCCCAAGGCTGGTGTCTGTA...AATGAAGAACAGTATCAAAAGGATGGCCAGCTGATTGAGTGTCGCTGCTGCTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389900.8
CDS-3UTR CCA 90 bp CCTACCCTTCAAGCTGACTTAGGATGCAATGGTACAGACACCAGCCTTGGGGGACCGAACTCCACCATTTaGGACGTCTTTATTATGGAT +
Preference number: 4 (lower is better)
Translates to: PTLQADLGCNGTDTSLGGPNSTI*DVFIMD
Trigger: ATCCATAATAAAGACGTCCCAAATGGTGGAGTTCGG...TCCCCCAAGGCTGGTGTCTGTACCATTGCATCCTAAGTCAGCTTGAAGGGTAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR CCA 90 bp CTCTCCGAACTCCACCATTTGGGACGTCTTTATTATGGATCCGTCCACTCTTCCAAGAGGCTCTTTCAATaGGCCAGCTTCAGAACCATC +
Preference number: 4 (lower is better)
Translates to: LSELHHLGRLYYGSVHSSKRLFQ*ASFRTI
Trigger: GATGGTTCTGAAGCTGGCCCATTGAAAGAGCCTCTT...GGAAGAGTGGACGGATCCATAATAAAGACGTCCCAAATGGTGGAGTTCGGAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR TCA 90 bp TCTCCATCCACACTCCTACCCCAAACGGGCTTTGTGCTGCTCAATGGGGATTCGTGCTTCAACAAATATTaGGCATCTCGTTTCTTTCAC +
Preference number: 4 (lower is better)
Translates to: SPSTLLPQTGFVLLNGDSCFNKY*ASRFFH
Trigger: GTGAAAGAAACGAGATGCTCAATATTTGTTGAAGCA...CGAATCCCCATTGAGCAGCACAAAGCCCGTTTGGGGTAGGAGTGTGGATGGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389900.8
CDS-3UTR GCA 90 bp GTCATATCCATTAATAGAAACTCGACAGAGGTAGCACATCTGGGCACCACAGCGCAAGCTGACTTAGGATaGAATGGTACAGACACCAGC +
Preference number: 4 (lower is better)
Translates to: VISINRNSTEVAHLGTTAQADLG*NGTDTS
Trigger: GCTGGTGTCTGTACCATTGCATCCTAAGTCAGCTTG...CGCTGTGGTGCCCAGATGTGCTACCTCTGTCGAGTTTCTATTAATGGATATGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389900.8
CDS-3UTR GCA 90 bp ACAAAAGTCCCAGTTACATATGATACAGGCTTTTTACACACAGTAGTTGAAACGGCCCCTCCAGGGAGATaGTCTCGGCTGCCTTGCTAC +
Preference number: 4 (lower is better)
Translates to: TKVPVTYDTGFLHTVVETAPPGR*SRLPCY
Trigger: GTAGCAAGGCAGCCGAGAGCATCTCCCTGGAGGGGC...CGTTTCAACTACTGTGTGTAAAAAGCCTGTATCATATGTAACTGGGACTTTTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR GCA 90 bp ACAAAAGTCCCAGTTACATATGATACAGGCTTTTTACACACAGTAGTTGAAACGTCACAGCTGTGGCAGTaGCTCTGCGGGCCATGGTCC +
Preference number: 4 (lower is better)
Translates to: TKVPVTYDTGFLHTVVETSQLWQ*LCGPWS
Trigger: GGACCATGGCCCGCAGAGGCACTGCCACAGCTGTGA...CGTTTCAACTACTGTGTGTAAAAAGCCTGTATCATATGTAACTGGGACTTTTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR CCA 90 bp ATAGCAGCAGCGACACTCAATCAGCTGGCCATCCTTTTGATACTGTTCTTCATTGAAATCCCACCTTGCTaGGGTTCCGGCCTTGGAAAA +
Preference number: 4 (lower is better)
Translates to: IAAATLNQLAILLILFFIEIPPC*GSGLGK
Trigger: TTTTCCAAGGCCGGAACCCCAGCAAGGTGGGATTTC...AATGAAGAACAGTATCAAAAGGATGGCCAGCTGATTGAGTGTCGCTGCTGCTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389900.8
CDS-3UTR CCA 90 bp CCGCAACCTCCTCCTCGGCTTTTCGCTCATAGTACTTATACAGGATGGTCTGGGCCCATTTGCTACATCTaGAAATCTTGCTTCCTAGAA +
Preference number: 4 (lower is better)
Translates to: PQPPPRLFAHSTYTGWSGPICYI*KSCFLE
Trigger: TTCTAGGAAGCAAGATTTCCAGATGTAGCAAATGGG...CCCAGACCATCCTGTATAAGTACTATGAGCGAAAAGCCGAGGAGGAGGTTGCGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389900.8
CDS-3UTR CCA 90 bp GTGATGCCTGTGGCCAGGAAGGCTTCAGACCTCTCATCTGTCAATGGGCCAGAGGGATGTTGGCAGAAATaGTCATATCCATTAATAGAA +
Preference number: 4 (lower is better)
Translates to: VMPVARKASDLSSVNGPEGCWQK*SYPLIE
Trigger: TTCTATTAATGGATATGACCATTTCTGCCAACATCC...CTCTGGCCCATTGACAGATGAGAGGTCTGAAGCCTTCCTGGCCACAGGCATCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR TCA 90 bp ACAAAAGTCCCAGTTACATATGATACAGGCTTTTTACACACAGTAGTTGAAACGGCCTTCAGCAACCACTaGGAACACCCGGGGCACACA +
Preference number: 4 (lower is better)
Translates to: TKVPVTYDTGFLHTVVETAFSNH*EHPGHT
Trigger: TGTGTGCCCCGGGTGTTCTCAGTGGTTGCTGAAGGC...CGTTTCAACTACTGTGTGTAAAAAGCCTGTATCATATGTAACTGGGACTTTTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR GCA 90 bp CCTACCCTTCAAGCTGACTTAGGATGCAATGGTACAGACACCAGCCTTGGGGGAAAAGTCTTCATGCTCTaGCATCTCTTTGATTTTCTG +
Preference number: 4 (lower is better)
Translates to: PTLQADLGCNGTDTSLGGKVFML*HLFDFL
Trigger: CAGAAAATCAAAGAGATGGCAGAGCATGAAGACTTT...TCCCCCAAGGCTGGTGTCTGTACCATTGCATCCTAAGTCAGCTTGAAGGGTAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000389900.8
ENST00000389902.8
ENST00000425013.6
CDS-3UTR GCA 90 bp TTCAGGCTAGTAGCAAAGTTCAGGCAGTCCAACAGGTATGGGCGCCAGCAAGGAAAAGTCTTCATGCTCTaGCATCTCTTTGATTTTCTG +
Preference number: 4 (lower is better)
Translates to: FRLVAKFRQSNRYGRQQGKVFML*HLFDFL
Trigger: CAGAAAATCAAAGAGATGGCAGAGCATGAAGACTTT...TCCTTGCTGGCGCCCATACCTGTTGGACTGCCTGAACTTTGCTACTAGCCTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR GCA 90 bp ACAAAAGTCCCAGTTACATATGATACAGGCTTTTTACACACAGTAGTTGAAACGTCTACAGCCGCCCTCTaGTCCCAGAGATCCTCCCTG +
Preference number: 4 (lower is better)
Translates to: TKVPVTYDTGFLHTVVETSTAAL*SQRSSL
Trigger: CAGGGAGGATCTCTGGGAGCAGAGGGCGGCTGTAGA...CGTTTCAACTACTGTGTGTAAAAAGCCTGTATCATATGTAACTGGGACTTTTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR CCA 90 bp AAGATCCAGAAATTCACCGTAGTCATCCTCAGAATCATCTTCTGTCAGGATGACATGCTGCTGAGGAGCTaGGGTGACCAGCATTGGAAT +
Preference number: 4 (lower is better)
Translates to: KIQKFTVVILRIIFCQDDMLLRS*GDQHWN
Trigger: ATTCCAATGCTGGTCACCCCAGCTCCTCAGCAGCAT...GTCATCCTGACAGAAGATGATTCTGAGGATGACTACGGTGAATTTCTGGATCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411812.1
CDS-3UTR CCA 90 bp GTGTCTGAGGTCTGTGAACTCCCAGCCTCTCAGAACCCCATGGCAACACGACAAGGATGTTGGCAGAAATaGTCATATCCATTAATAGAA +
Preference number: 4 (lower is better)
Translates to: VSEVCELPASQNPMATRQGCWQK*SYPLIE
Trigger: TTCTATTAATGGATATGACCATTTCTGCCAACATCC...TTGTCGTGTTGCCATGGGGTTCTGAGAGGCTGGGAGTTCACAGACCTCAGACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR CCA 90 bp ACAAAAGTCCCAGTTACATATGATACAGGCTTTTTACACACAGTAGTTGAAACGCGCACGGGTTTTGGATaGGGGGACAGCATCTTGGCC +
Preference number: 4 (lower is better)
Translates to: TKVPVTYDTGFLHTVVETRTGFG*GDSILA
Trigger: GGCCAAGATGCTGTCCCCCCATCCAAAACCCGTGCG...CGTTTCAACTACTGTGTGTAAAAAGCCTGTATCATATGTAACTGGGACTTTTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR CCA 90 bp ACAAAAGTCCCAGTTACATATGATACAGGCTTTTTACACACAGTAGTTGAAACGGCAGCCCCACCCCAATaGTTGTCGGACTCAGCTGTG +
Preference number: 4 (lower is better)
Translates to: TKVPVTYDTGFLHTVVETAAPPQ*LSDSAV
Trigger: CACAGCTGAGTCCGACAACCATTGGGGTGGGGCTGC...CGTTTCAACTACTGTGTGTAAAAAGCCTGTATCATATGTAACTGGGACTTTTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR CCA 90 bp TCCAGGAGGCCCAAGATCCAGAAATTCACCGTAGTCATCCTCAGAATCATCTTCCATTGCACTCTGGCCTaGGCAATGAGTAAAATTCCA +
Preference number: 4 (lower is better)
Translates to: SRRPKIQKFTVVILRIIFHCTLA*AMSKIP
Trigger: TGGAATTTTACTCATTGCCCAGGCCAGAGTGCAATG...GAAGATGATTCTGAGGATGACTACGGTGAATTTCTGGATCTTGGGCCTCCTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411812.1
3UTR CAA 72 bp GCTGAGCTCCAACTTTCCAGATCCAAAGACTGCCTCTaGGGCATATCTGATGAGACACTCTTTGCAGAACAA +
Preference number: 4 (lower is better)
Translates to: AELQLSRSKDCL*GISDETLFAEQ
Trigger: TTGTTCTGCAAAGAGTGTCTCATCAGATATGCCCAAGAGGCAGTCTTTGGATCTGGAAAGTTGGAGCTCAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389900.8
3UTR CAA 72 bp TTGCAGCCTTCAGATTTGATGAGGCCAGTCCCACACTaGTGGCATTTTCTAATGCGGGCAGCAGTCATTTTT +
Preference number: 4 (lower is better)
Translates to: LQPSDLMRPVPH*WHFLMRAAVIF
Trigger: AAAAATGACTGCTGCCCGCATTAGAAAATGCCACAAGTGTGGGACTGGCCTCATCAAATCTGAAGGCTGCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389900.8
CDS-3UTR GCA 90 bp GTCATATCCATTAATAGAAACTCGACAGAGGTAGCACATCTGGGCACCACAGCGGTTGACAATGTCATTTaGTGCTTGGTTATGACTCGG +
Preference number: 4 (lower is better)
Translates to: VISINRNSTEVAHLGTTAVDNVI*CLVMTR
Trigger: CCGAGTCATAACCAAGCAGCAAATGACATTGTCAAC...CGCTGTGGTGCCCAGATGTGCTACCTCTGTCGAGTTTCTATTAATGGATATGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389900.8
CDS-3UTR GCA 90 bp TCTGATGAGACACTCTTTGCAGAACAAGTGAGCATCTGCGCACTGCGTCAGCTCAGCAAAAAGTCTTCATaGTCTGCCATCTCTTTGATT +
Preference number: 4 (lower is better)
Translates to: SDETLFAEQVSICALRQLSKKSS*SAISLI
Trigger: AATCAAAGAGATGGCAGAGCATGAAGACTTTTTGCT...GAGCTGACGCAGTGCGCAGATGCTCACTTGTTCTGCAAAGAGTGTCTCATCAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389900.8
CDS-3UTR GCA 90 bp CTGGATTTCCTCAATAAGCTTCTCATCATCTTCAGTGGGATCGGTCCAGAGAGATCCAGATCCAAAGACTaGCTCTTGGGCATATCTGAT +
Preference number: 4 (lower is better)
Translates to: LDFLNKLLIIFSGIGPERSRSKD*LLGISD
Trigger: ATCAGATATGCCCAAGAGGCAGTCTTTGGATCTGGA...TCTCTCTGGACCGATCCCACTGAAGATGATGAGAAGCTTATTGAGGAAATCCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389900.8
CDS-3UTR CCA 90 bp TGCCTCTTGGGCATATCTGATGAGACACTCTTTGCAGAACAAGTGAGCATCTGCGGTTCTCTTTCTGTTTaGCCACTTGGCTTAGTGAAT +
Preference number: 4 (lower is better)
Translates to: CLLGISDETLFAEQVSICGSLSV*PLGLVN
Trigger: ATTCACTAAGCCAAGTGGCCAAACAGAAAGAGAACC...GCAGATGCTCACTTGTTCTGCAAAGAGTGTCTCATCAGATATGCCCAAGAGGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389900.8
CDS-3UTR CCA 90 bp GTCATATCCATTAATAGAAACTCGACAGAGGTAGCACATCTGGGCACCACAGCGTCTTCAGCCTCCTTCTaGATTTCCTCAATAAGCTTC +
Preference number: 4 (lower is better)
Translates to: VISINRNSTEVAHLGTTASSASF*ISSISF
Trigger: GAAGCTTATTGAGGAAATCCAGAAGGAGGCTGAAGA...CGCTGTGGTGCCCAGATGTGCTACCTCTGTCGAGTTTCTATTAATGGATATGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389900.8
CDS-3UTR TCA 90 bp CAGAAATTCACCGTAGTCATCCTCAGAATCATCTTCTGTCAGGATGACATCATCCATCTTCTGTCAGGATaGCATCATCATCCAGGTCCT +
Preference number: 4 (lower is better)
Translates to: QKFTVVILRIIFCQDDIIHLLSG*HHHPGP
Trigger: AGGACCTGGATGATGATGTCATCCTGACAGAAGATG...GATGATGTCATCCTGACAGAAGATGATTCTGAGGATGACTACGGTGAATTTCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411812.1
CDS-3UTR GCA 90 bp CTCTCCGAACTCCACCATTTGGGACGTCTTTATTATGGATCCGTCCACTCTTCCAGCAAAAAGTCTTCATaGTCTGCCATCTCTTTGATT +
Preference number: 4 (lower is better)
Translates to: LSELHHLGRLYYGSVHSSSKKSS*SAISLI
Trigger: AATCAAAGAGATGGCAGAGCATGAAGACTTTTTGCT...GGAAGAGTGGACGGATCCATAATAAAGACGTCCCAAATGGTGGAGTTCGGAGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR GCA 90 bp ACAAAAGTCCCAGTTACATATGATACAGGCTTTTTACACACAGTAGTTGAAACGCCCAAACGGGCTTTGTaGTGCTCAATGGGGATTCGG +
Preference number: 4 (lower is better)
Translates to: TKVPVTYDTGFLHTVVETPKRAL*CSMGIR
Trigger: CCGAATCCCCATTGAGCAGCACAAAGCCCGTTTGGG...CGTTTCAACTACTGTGTGTAAAAAGCCTGTATCATATGTAACTGGGACTTTTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR CCA 90 bp TCTGATGAGACACTCTTTGCAGAACAAGTGAGCATCTGCGCACTGCGTCAGCTCGGATGTTGGCAGAAATaGTCATATCCATTAATAGAA +
Preference number: 4 (lower is better)
Translates to: SDETLFAEQVSICALRQLGCWQK*SYPLIE
Trigger: TTCTATTAATGGATATGACCATTTCTGCCAACATCC...GAGCTGACGCAGTGCGCAGATGCTCACTTGTTCTGCAAAGAGTGTCTCATCAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389900.8
CDS-3UTR TCA 90 bp ATAGCAGCAGCGACACTCAATCAGCTGGCCATCCTTTTGATACTGTTCTTCATTTCCAAATTGGGCTCTTaGGATTCTTGCATTGGAAAG +
Preference number: 4 (lower is better)
Translates to: IAAATLNQLAILLILFFISKLGS*DSCIGK
Trigger: CTTTCCAATGCAAGAATCTCAAGAGCCCAATTTGGA...AATGAAGAACAGTATCAAAAGGATGGCCAGCTGATTGAGTGTCGCTGCTGCTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389900.8
CDS-3UTR TCA 90 bp ACAAAAGTCCCAGTTACATATGATACAGGCTTTTTACACACAGTAGTTGAAACGTGCCTTCCATGCAGCTaGGCTCCAACTTTCCAGATC +
Preference number: 4 (lower is better)
Translates to: TKVPVTYDTGFLHTVVETCLPCS*APTFQI
Trigger: GATCTGGAAAGTTGGAGCTCAGCTGCATGGAAGGCA...CGTTTCAACTACTGTGTGTAAAAAGCCTGTATCATATGTAACTGGGACTTTTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR TCA 90 bp ACAAAAGTCCCAGTTACATATGATACAGGCTTTTTACACACAGTAGTTGAAACGGGGGTCCAATGCGTTTaGAGGTGTTCTCTCCATTCT +
Preference number: 4 (lower is better)
Translates to: TKVPVTYDTGFLHTVVETGVQCV*RCSLHS
Trigger: AGAATGGAGAGAACACCTTCAAACGCATTGGACCCC...CGTTTCAACTACTGTGTGTAAAAAGCCTGTATCATATGTAACTGGGACTTTTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR CCA 90 bp ACAAAAGTCCCAGTTACATATGATACAGGCTTTTTACACACAGTAGTTGAAACGTTCAGATCTTGCCACTaGGCAGCTGGTTTGATGAGA +
Preference number: 4 (lower is better)
Translates to: TKVPVTYDTGFLHTVVETFRSCH*AAGLMR
Trigger: TCTCATCAAACCAGCTGCCCAGTGGCAAGATCTGAA...CGTTTCAACTACTGTGTGTAAAAAGCCTGTATCATATGTAACTGGGACTTTTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389902.8
CDS-3UTR CAA 90 bp CACACGGGGCAGGGGTGGCACCCAGGGTCACCTGTCTCCCTAAGGAGGCCCACTGCTGGGGTTCCGGCCTaGGAAAAGCGGGCCCTGGGA +
Preference number: 5 (lower is better)
Translates to: HTGQGWHPGSPVSLRRPTAGVPA*EKRALG
Trigger: TCCCAGGGCCCGCTTTTCCAAGGCCGGAACCCCAGC...AGTGGGCCTCCTTAGGGAGACAGGTGACCCTGGGTGCCACCCCTGCCCCGTGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR CAA 90 bp GCCCTGTGGTCCCCCGTGCCTGGCTCGGGGAGGATCCTCAGGAATCAGGGACCCCACTGGCACGGCCCCTaGCTGGCTGGTCTGAAGACC +
Preference number: 5 (lower is better)
Translates to: ALWSPVPGSGRILRNQGPHWHGP*LAGLKT
Trigger: GGTCTTCAGACCAGCCAGCAAGGGGCCGTGCCAGTG...GGGTCCCTGATTCCTGAGGATCCTCCCCGAGCCAGGCACGGGGGACCACAGGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR CAA 90 bp CCTCCAGGGAGATGCTCTCGGCTGCCTTGCTACCCAGGGGTCGGCTCCGAGGAGAAGTGCATGGGCAGGTaGTGCTCCAGGGGCATGTGG +
Preference number: 5 (lower is better)
Translates to: PPGRCSRLPCYPGVGSEEKCMGR*CSRGMW
Trigger: CCACATGCCCCTGGAGCACAACCTGCCCATGCACTT...CTCCTCGGAGCCGACCCCTGGGTAGCAAGGCAGCCGAGAGCATCTCCCTGGAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR CAA 90 bp CCCTTTGTCCTGCCTGGGGCTCTTGCTGGAGCCACGTGCCTAGGGTACAGGGCAGCAGAAGGACTGCCGTaGGTGGCCTGGGGGATGCGA +
Preference number: 5 (lower is better)
Translates to: PFVLPGALAGATCLGYRAAEGLP*VAWGMR
Trigger: TCGCATCCCCCAGGCCACCAACGGCAGTCCTTCTGC...TGCCCTGTACCCTAGGCACGTGGCTCCAGCAAGAGCCCCAGGCAGGACAAAGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR CAA 90 bp CCTCCAGGGAGATGCTCTCGGCTGCCTTGCTACCCAGGGGTCGGCTCCGAGGAGCCGAAGACAATCCTGTaGCTGCCGCATGGAGCCTGC +
Preference number: 5 (lower is better)
Translates to: PPGRCSRLPCYPGVGSEEPKTIL*LPHGAC
Trigger: GCAGGCTCCATGCGGCAGCAACAGGATTGTCTTCGG...CTCCTCGGAGCCGACCCCTGGGTAGCAAGGCAGCCGAGAGCATCTCCCTGGAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR CAA 90 bp CCCTTTGTCCTGCCTGGGGCTCTTGCTGGAGCCACGTGCCTAGGGTACAGGGCACACTGGCACGGCCCCTaGCTGGCTGGTCTGAAGACC +
Preference number: 5 (lower is better)
Translates to: PFVLPGALAGATCLGYRAHWHGP*LAGLKT
Trigger: GGTCTTCAGACCAGCCAGCAAGGGGCCGTGCCAGTG...TGCCCTGTACCCTAGGCACGTGGCTCCAGCAAGAGCCCCAGGCAGGACAAAGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR CAA 90 bp CTTGGGTGGGCCAGGCCCTGCTTCAGGAGGTGGCGGGCCACTCCGGAGACTGATCCTCAGGGTTGCCTGTaGTCTGACCTGCTCTCTGGG +
Preference number: 5 (lower is better)
Translates to: LGWARPCFRRWRATPETDPQGCL*SDLLSG
Trigger: CCCAGAGAGCAGGTCAGACAACAGGCAACCCTGAGG...ATCAGTCTCCGGAGTGGCCCGCCACCTCCTGAAGCAGGGCCTGGCCCACCCAAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR CAA 90 bp CTTGGGTGGGCCAGGCCCTGCTTCAGGAGGTGGCGGGCCACTCCGGAGACTGATTCTCCAGCTCACTGGTaGGGAACGAACACGTGCAGC +
Preference number: 5 (lower is better)
Translates to: LGWARPCFRRWRATPETDSPAHW*GTNTCS
Trigger: GCTGCACGTGTTCGTTCCCAACCAGTGAGCTGGAGA...ATCAGTCTCCGGAGTGGCCCGCCACCTCCTGAAGCAGGGCCTGGCCCACCCAAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR CAA 90 bp TCTCTCCCCAATGCTGTCACTGGTCCAGGCAGGAGCCCGAGGTTCAGGCCCTGCTGCTGCCTGCTCCCTTaGTCCTGCCTGGGGCTCTTG +
Preference number: 5 (lower is better)
Translates to: SLPNAVTGPGRSPRFRPCCCLLP*SCLGLL
Trigger: CAAGAGCCCCAGGCAGGACAAAGGGAGCAGGCAGCA...GCAGGGCCTGAACCTCGGGCTCCTGCCTGGACCAGTGACAGCATTGGGGAGAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR CAA 90 bp CTTGGGTGGGCCAGGCCCTGCTTCAGGAGGTGGCGGGCCACTCCGGAGACTGATTTGAGTGGGAAGTTGTaGAACACAGGCCGCACGGGA +
Preference number: 5 (lower is better)
Translates to: LGWARPCFRRWRATPETDLSGKL*NTGRTG
Trigger: TCCCGTGCGGCCTGTGTTCAACAACTTCCCACTCAA...ATCAGTCTCCGGAGTGGCCCGCCACCTCCTGAAGCAGGGCCTGGCCCACCCAAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR CAA 90 bp TGCCTGTTGTCTGACCTGCTCTCTGGGCACTGGCACGGCCCCTTGCTGGCTGGTGCCCCACCCCAATGGTaGTCGGACTCAGCTGTGTCT +
Preference number: 5 (lower is better)
Translates to: CLLSDLLSGHWHGPLLAGAPPQW*SDSAVS
Trigger: AGACACAGCTGAGTCCGACAACCATTGGGGTGGGGC...ACCAGCCAGCAAGGGGCCGTGCCAGTGCCCAGAGAGCAGGTCAGACAACAGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR CAA 90 bp GAAACCCAGGGCCGGACAGGAGGCGAGGAGGGTGAGTGGGGACATGGCAGGGCTGGGCTCTTGAGATTCTaGCATTGGAAAGGCTGGACC +
Preference number: 5 (lower is better)
Translates to: ETQGRTGGEEGEWGHGRAGLLRF*HWKGWT
Trigger: GGTCCAGCCTTTCCAATGCAAGAATCTCAAGAGCCC...AGCCCTGCCATGTCCCCACTCACCCTCCTCGCCTCCTGTCCGGCCCTGGGTTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR CAA 90 bp TCTCTCCCCAATGCTGTCACTGGTCCAGGCAGGAGCCCGAGGTTCAGGCCCTGCTCTCCAGCTCACTGGTaGGGAACGAACACGTGCAGC +
Preference number: 5 (lower is better)
Translates to: SLPNAVTGPGRSPRFRPCSPAHW*GTNTCS
Trigger: GCTGCACGTGTTCGTTCCCAACCAGTGAGCTGGAGA...GCAGGGCCTGAACCTCGGGCTCCTGCCTGGACCAGTGACAGCATTGGGGAGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR CAA 90 bp ACCCTCCAAGGAAAGAGGCCGCCGCTCCTTCCCCACCAGCCCAGTGTGGCCAGATTGAGTGGGAAGTTGTaGAACACAGGCCGCACGGGA +
Preference number: 5 (lower is better)
Translates to: TLQGKRPPLLPHQPSVARLSGKL*NTGRTG
Trigger: TCCCGTGCGGCCTGTGTTCAACAACTTCCCACTCAA...TCTGGCCACACTGGGCTGGTGGGGAAGGAGCGGCGGCCTCTTTCCTTGGAGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR CAA 90 bp CACACGGGGCAGGGGTGGCACCCAGGGTCACCTGTCTCCCTAAGGAGGCCCACTATGTTGAGTGGGAAGTaGTTGAACACAGGCCGCACG +
Preference number: 5 (lower is better)
Translates to: HTGQGWHPGSPVSLRRPTMLSGK*LNTGRT
Trigger: CGTGCGGCCTGTGTTCAACAACTTCCCACTCAACAT...AGTGGGCCTCCTTAGGGAGACAGGTGACCCTGGGTGCCACCCCTGCCCCGTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR CAA 90 bp CCTCCAGGGAGATGCTCTCGGCTGCCTTGCTACCCAGGGGTCGGCTCCGAGGAGCACTGGGCAGCTGGTTaGATGAGATTGGGTCGTGAT +
Preference number: 5 (lower is better)
Translates to: PPGRCSRLPCYPGVGSEEHWAAG*MRLGRD
Trigger: ATCACGACCCAATCTCATCAAACCAGCTGCCCAGTG...CTCCTCGGAGCCGACCCCTGGGTAGCAAGGCAGCCGAGAGCATCTCCCTGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389902.8
CDS-3UTR CAA 90 bp CCCCGCCGCGAGATGGGTCTGCTGCTGCCTCATCTGAGTAGGTGTAAGAGGGGACCTCAGGGTTGCCTGTaGTCTGACCTGCTCTCTGGG +
Preference number: 5 (lower is better)
Translates to: PRREMGLLLPHLSRCKRGPQGCL*SDLLSG
Trigger: CCCAGAGAGCAGGTCAGACAACAGGCAACCCTGAGG...TCCCCTCTTACACCTACTCAGATGAGGCAGCAGCAGACCCATCTCGCGGCGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR CAA 90 bp CTTGGGTGGGCCAGGCCCTGCTTCAGGAGGTGGCGGGCCACTCCGGAGACTGATGAGATTGATCCACTCTaGTCCCCGATGGCAGTGAAA +
Preference number: 5 (lower is better)
Translates to: LGWARPCFRRWRATPETDEIDPL*SPMAVK
Trigger: TTTCACTGCCATCGGGGACAAGAGTGGATCAATCTC...ATCAGTCTCCGGAGTGGCCCGCCACCTCCTGAAGCAGGGCCTGGCCCACCCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR CAA 90 bp GTGTCTGAGGTCTGTGAACTCCCAGCCTCTCAGAACCCCATGGCAACACGACAAGCTGGGGTTCCGGCCTaGGAAAAGCGGGCCCTGGGA +
Preference number: 5 (lower is better)
Translates to: VSEVCELPASQNPMATRQAGVPA*EKRALG
Trigger: TCCCAGGGCCCGCTTTTCCAAGGCCGGAACCCCAGC...TTGTCGTGTTGCCATGGGGTTCTGAGAGGCTGGGAGTTCACAGACCTCAGACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR CAA 90 bp ACCCTCCAAGGAAAGAGGCCGCCGCTCCTTCCCCACCAGCCCAGTGTGGCCAGACGGCAAGACATGCGGTaGCAGCCTTCAGATTTGATG +
Preference number: 5 (lower is better)
Translates to: TLQGKRPPLLPHQPSVARRQDMR*QPSDLM
Trigger: CATCAAATCTGAAGGCTGCAACCGCATGTCTTGCCG...TCTGGCCACACTGGGCTGGTGGGGAAGGAGCGGCGGCCTCTTTCCTTGGAGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR CAA 90 bp CTCATCACCCAGGGTGGCAGAAACGTCTCCCCCAGCAGTTGGGCTGCCCAGCAGTCCAGAGAGAGCATCTaGAACACTCCTGGCAAGGGG +
Preference number: 5 (lower is better)
Translates to: LITQGGRNVSPSSWAAQQSRESI*NTPGKG
Trigger: CCCCTTGCCAGGAGTGTTCAAGATGCTCTCTCTGGA...CTGCTGGGCAGCCCAACTGCTGGGGGAGACGTTTCTGCCACCCTGGGTGATGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR CAA 90 bp ACCCTCCAAGGAAAGAGGCCGCCGCTCCTTCCCCACCAGCCCAGTGTGGCCAGAATGTTGAGTGGGAAGTaGTTGAACACAGGCCGCACG +
Preference number: 5 (lower is better)
Translates to: TLQGKRPPLLPHQPSVARMLSGK*LNTGRT
Trigger: CGTGCGGCCTGTGTTCAACAACTTCCCACTCAACAT...TCTGGCCACACTGGGCTGGTGGGGAAGGAGCGGCGGCCTCTTTCCTTGGAGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR CAA 90 bp GAGGGGAGGGGCAGTTCACATCGCAGCTCTCTCCGAACTCCACCATTTGGGACGAAGTGCATGGGCAGGTaGTGCTCCAGGGGCATGTGG +
Preference number: 5 (lower is better)
Translates to: EGRGSSHRSSLRTPPFGTKCMGR*CSRGMW
Trigger: CCACATGCCCCTGGAGCACAACCTGCCCATGCACTT...CGTCCCAAATGGTGGAGTTCGGAGAGAGCTGCGATGTGAACTGCCCCTCCCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR CAA 90 bp GAGGGGAGGGGCAGTTCACATCGCAGCTCTCTCCGAACTCCACCATTTGGGACGCCGAAGACAATCCTGTaGCTGCCGCATGGAGCCTGC +
Preference number: 5 (lower is better)
Translates to: EGRGSSHRSSLRTPPFGTPKTIL*LPHGAC
Trigger: GCAGGCTCCATGCGGCAGCAACAGGATTGTCTTCGG...CGTCCCAAATGGTGGAGTTCGGAGAGAGCTGCGATGTGAACTGCCCCTCCCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR CAA 90 bp CTTGGGTGGGCCAGGCCCTGCTTCAGGAGGTGGCGGGCCACTCCGGAGACTGATGGGTTCTCTTTCTGTTaGGCCACTTGGCTTAGTGAA +
Preference number: 5 (lower is better)
Translates to: LGWARPCFRRWRATPETDGFSFC*ATWLSE
Trigger: TTCACTAAGCCAAGTGGCCAAACAGAAAGAGAACCC...ATCAGTCTCCGGAGTGGCCCGCCACCTCCTGAAGCAGGGCCTGGCCCACCCAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR CAA 90 bp CTTGGGTGGGCCAGGCCCTGCTTCAGGAGGTGGCGGGCCACTCCGGAGACTGATTATTTCACGGGGCTGTaGGTTCAGAGACTGGAAGTA +
Preference number: 5 (lower is better)
Translates to: LGWARPCFRRWRATPETDYFTGL*VQRLEV
Trigger: TACTTCCAGTCTCTGAACCAACAGCCCCGTGAAATA...ATCAGTCTCCGGAGTGGCCCGCCACCTCCTGAAGCAGGGCCTGGCCCACCCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR CAA 90 bp CCGCAACCTCCTCCTCGGCTTTTCGCTCATAGTACTTATACAGGATGGTCTGGGGCTGGGGTTCCGGCCTaGGAAAAGCGGGCCCTGGGA +
Preference number: 5 (lower is better)
Translates to: PQPPPRLFAHSTYTGWSGAGVPA*EKRALG
Trigger: TCCCAGGGCCCGCTTTTCCAAGGCCGGAACCCCAGC...CCCAGACCATCCTGTATAAGTACTATGAGCGAAAAGCCGAGGAGGAGGTTGCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000389900.8
CDS-3UTR CAA 90 bp CTCATCACCCAGGGTGGCAGAAACGTCTCCCCCAGCAGTTGGGCTGCCCAGCAGGGGCTCTTGAGATTCTaGCATTGGAAAGGCTGGACC +
Preference number: 5 (lower is better)
Translates to: LITQGGRNVSPSSWAAQQGLLRF*HWKGWT
Trigger: GGTCCAGCCTTTCCAATGCAAGAATCTCAAGAGCCC...CTGCTGGGCAGCCCAACTGCTGGGGGAGACGTTTCTGCCACCCTGGGTGATGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR CAA 90 bp CTTGGGTGGGCCAGGCCCTGCTTCAGGAGGTGGCGGGCCACTCCGGAGACTGATTACCTCTGCAGCTTCTaGCCCCCAAATGTTTTCCAA +
Preference number: 5 (lower is better)
Translates to: LGWARPCFRRWRATPETDYLCSF*PPNVFQ
Trigger: TTGGAAAACATTTGGGGGCAAGAAGCTGCAGAGGTA...ATCAGTCTCCGGAGTGGCCCGCCACCTCCTGAAGCAGGGCCTGGCCCACCCAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR CAA 90 bp CCTCCAGGGAGATGCTCTCGGCTGCCTTGCTACCCAGGGGTCGGCTCCGAGGAGTCCAAAGACTGCCTCTaGGGCATATCTGATGAGACA +
Preference number: 5 (lower is better)
Translates to: PPGRCSRLPCYPGVGSEESKDCL*GISDET
Trigger: TGTCTCATCAGATATGCCCAAGAGGCAGTCTTTGGA...CTCCTCGGAGCCGACCCCTGGGTAGCAAGGCAGCCGAGAGCATCTCCCTGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR CAA 90 bp TCTCTCCCCAATGCTGTCACTGGTCCAGGCAGGAGCCCGAGGTTCAGGCCCTGCCGGCAAGACATGCGGTaGCAGCCTTCAGATTTGATG +
Preference number: 5 (lower is better)
Translates to: SLPNAVTGPGRSPRFRPCRQDMR*QPSDLM
Trigger: CATCAAATCTGAAGGCTGCAACCGCATGTCTTGCCG...GCAGGGCCTGAACCTCGGGCTCCTGCCTGGACCAGTGACAGCATTGGGGAGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR CAA 90 bp CAGGTTGTGCTCCAGGGGCATGTGGATGGGACCGAAGTCATAGTTGACCCGCACAAGTGCATGGGCAGGTaGTGCTCCAGGGGCATGTGG +
Preference number: 5 (lower is better)
Translates to: QVVLQGHVDGTEVIVDPHKCMGR*CSRGMW
Trigger: CCACATGCCCCTGGAGCACAACCTGCCCATGCACTT...GTGCGGGTCAACTATGACTTCGGTCCCATCCACATGCCCCTGGAGCACAACCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389900.8
CDS-3UTR CAA 90 bp CCCTTTGTCCTGCCTGGGGCTCTTGCTGGAGCCACGTGCCTAGGGTACAGGGCATACCCCAAACGGGCTTaGTGCTGCTCAATGGGGATT +
Preference number: 5 (lower is better)
Translates to: PFVLPGALAGATCLGYRAYPKRA*CCSMGI
Trigger: AATCCCCATTGAGCAGCACAAAGCCCGTTTGGGGTA...TGCCCTGTACCCTAGGCACGTGGCTCCAGCAAGAGCCCCAGGCAGGACAAAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR CAA 90 bp ACAGCATCTTGGCCCTCACAGCTGTGGCAGTGCCTCTGCGGGCCATGGTCCCAGTACCCCAAACGGGCTTaGTGCTGCTCAATGGGGATT +
Preference number: 5 (lower is better)
Translates to: TASWPSQLWQCLCGPWSQYPKRA*CCSMGI
Trigger: AATCCCCATTGAGCAGCACAAAGCCCGTTTGGGGTA...CTGGGACCATGGCCCGCAGAGGCACTGCCACAGCTGTGAGGGCCAAGATGCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR CAA 90 bp ATGCAGCCCCACCCCAATGGTTGTCGGACTCAGCTGTGTCTGAGGTCTGTGAACTGCTGCCTGCTCCCTTaGTCCTGCCTGGGGCTCTTG +
Preference number: 5 (lower is better)
Translates to: MQPHPNGCRTQLCLRSVNCCLLP*SCLGLL
Trigger: CAAGAGCCCCAGGCAGGACAAAGGGAGCAGGCAGCA...GTTCACAGACCTCAGACACAGCTGAGTCCGACAACCATTGGGGTGGGGCTGCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR CAA 90 bp ACCCTCCAAGGAAAGAGGCCGCCGCTCCTTCCCCACCAGCCCAGTGTGGCCAGAAATGTCATTTGCTGCTaGGTTATGACTCGGTCCAGG +
Preference number: 5 (lower is better)
Translates to: TLQGKRPPLLPHQPSVARNVICC*VMTRSR
Trigger: CCTGGACCGAGTCATAACCAAGCAGCAAATGACATT...TCTGGCCACACTGGGCTGGTGGGGAAGGAGCGGCGGCCTCTTTCCTTGGAGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR CAA 90 bp GAAACCCAGGGCCGGACAGGAGGCGAGGAGGGTGAGTGGGGACATGGCAGGGCTCTGACTCTCCTAGATTaGATAACAGCTCTGTCTCTG +
Preference number: 5 (lower is better)
Translates to: ETQGRTGGEEGEWGHGRALTLLD*ITALSL
Trigger: CAGAGACAGAGCTGTTATCAAATCTAGGAGAGTCAG...AGCCCTGCCATGTCCCCACTCACCCTCCTCGCCTCCTGTCCGGCCCTGGGTTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR CAA 90 bp ACTGTCCAACAGAGCCGGAAAGCTACAGGACGGGCACCTGACAAGCTCGTCGGCTCCAGAGAGAGCATCTaGAACACTCCTGGCAAGGGG +
Preference number: 5 (lower is better)
Translates to: TVQQSRKATGRAPDKLVGSRESI*NTPGKG
Trigger: CCCCTTGCCAGGAGTGTTCAAGATGCTCTCTCTGGA...GCCGACGAGCTTGTCAGGTGCCCGTCCTGTAGCTTTCCGGCTCTGTTGGACAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389900.8
CDS-3UTR CAA 90 bp TGCCTGTTGTCTGACCTGCTCTCTGGGCACTGGCACGGCCCCTTGCTGGCTGGTCAACCTTTTCAGATCTaGCCACTGGGCAGCTGGTTT +
Preference number: 5 (lower is better)
Translates to: CLLSDLLSGHWHGPLLAGQPFQI*PLGSWF
Trigger: AAACCAGCTGCCCAGTGGCAAGATCTGAAAAGGTTG...ACCAGCCAGCAAGGGGCCGTGCCAGTGCCCAGAGAGCAGGTCAGACAACAGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389902.8
CDS-3UTR CAA 90 bp ACCGAGGATGAGAAAGTTAGGCGGCAACAGAACAAAACCCCCGCCGCGAGATGGGGCCCATCTCGGAGATaGATCCACTCTTGTCCCCGA +
Preference number: 5 (lower is better)
Translates to: TEDEKVRRQQNKTPAARWGPSRR*IHSCPR
Trigger: TCGGGGACAAGAGTGGATCAATCTCCGAGATGGGCC...CCATCTCGCGGCGGGGGTTTTGTTCTGTTGCCGCCTAACTTTCTCATCCTCGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR CAA 90 bp TGCACCTTCTCCACAGGCTTCTCCAGCGGGGGTCCAATGCGTTTGAAGGTGTTCTCTCCAGCTCACTGGTaGGGAACGAACACGTGCAGC +
Preference number: 5 (lower is better)
Translates to: CTFSTGFSSGGPMRLKVFSPAHW*GTNTCS
Trigger: GCTGCACGTGTTCGTTCCCAACCAGTGAGCTGGAGA...GAACACCTTCAAACGCATTGGACCCCCGCTGGAGAAGCCTGTGGAGAAGGTGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389900.8
CDS-3UTR CAA 90 bp ACTGTCCAACAGAGCCGGAAAGCTACAGGACGGGCACCTGACAAGCTCGTCGGCTTGCAGCCTTCAGATTaGATGAGGCCAGTCCCACAC +
Preference number: 5 (lower is better)
Translates to: TVQQSRKATGRAPDKLVGLQPSD*MRPVPH
Trigger: GTGTGGGACTGGCCTCATCAAATCTGAAGGCTGCAA...GCCGACGAGCTTGTCAGGTGCCCGTCCTGTAGCTTTCCGGCTCTGTTGGACAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389900.8
CDS-3UTR CAA 90 bp GCTGGCTGGTCTGAAGACCCCCAGTGCTTCTCTCCCCAATGCTGTCACTGGTCCTTGCAGCCTTCAGATTaGATGAGGCCAGTCCCACAC +
Preference number: 5 (lower is better)
Translates to: AGWSEDPQCFSPQCCHWSLQPSD*MRPVPH
Trigger: GTGTGGGACTGGCCTCATCAAATCTGAAGGCTGCAA...GGACCAGTGACAGCATTGGGGAGAGAAGCACTGGGGGTCTTCAGACCAGCCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR CAA 90 bp ACCCTCCAAGGAAAGAGGCCGCCGCTCCTTCCCCACCAGCCCAGTGTGGCCAGATCCGAACTCCACCATTaGGGACGTCTTTATTATGGA +
Preference number: 5 (lower is better)
Translates to: TLQGKRPPLLPHQPSVARSELHH*GRLYYG
Trigger: TCCATAATAAAGACGTCCCAAATGGTGGAGTTCGGA...TCTGGCCACACTGGGCTGGTGGGGAAGGAGCGGCGGCCTCTTTCCTTGGAGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR CAA 90 bp GCTCGTCGGCGTAGGCTGCCGCAACCTCCTCCTCGGCTTTTCGCTCATAGTACTGAGATTGATCCACTCTaGTCCCCGATGGCAGTGAAA +
Preference number: 5 (lower is better)
Translates to: ARRRRLPQPPPRLFAHSTEIDPL*SPMAVK
Trigger: TTTCACTGCCATCGGGGACAAGAGTGGATCAATCTC...AGTACTATGAGCGAAAAGCCGAGGAGGAGGTTGCGGCAGCCTACGCCGACGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389900.8
CDS-3UTR CAA 90 bp GAGGGGAGGGGCAGTTCACATCGCAGCTCTCTCCGAACTCCACCATTTGGGACGGAGGAACGACCTGGTTaGTTATTTCACGGGGCTGTT +
Preference number: 5 (lower is better)
Translates to: EGRGSSHRSSLRTPPFGTEERPG*LFHGAV
Trigger: AACAGCCCCGTGAAATAACAAACCAGGTCGTTCCTC...CGTCCCAAATGGTGGAGTTCGGAGAGAGCTGCGATGTGAACTGCCCCTCCCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR CAA 90 bp TCCAGCTCACTGGTTGGGAACGAACACGTGCAGCTGCCTTCCATGCAGCTGAGCGGGCTCTTGAGATTCTaGCATTGGAAAGGCTGGACC +
Preference number: 5 (lower is better)
Translates to: SSSLVGNEHVQLPSMQLSGLLRF*HWKGWT
Trigger: GGTCCAGCCTTTCCAATGCAAGAATCTCAAGAGCCC...GCTCAGCTGCATGGAAGGCAGCTGCACGTGTTCGTTCCCAACCAGTGAGCTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389900.8
CDS-3UTR CAA 90 bp CTCATCACCCAGGGTGGCAGAAACGTCTCCCCCAGCAGTTGGGCTGCCCAGCAGATAGAGGTACGGTACTaGATGTCGTCTTTTTCAGCC +
Preference number: 5 (lower is better)
Translates to: LITQGGRNVSPSSWAAQQIEVRY*MSSFSA
Trigger: GGCTGAAAAAGACGACATCAAGTACCGTACCTCTAT...CTGCTGGGCAGCCCAACTGCTGGGGGAGACGTTTCTGCCACCCTGGGTGATGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR CAA 90 bp AGGCTTCAGACCTCTCATCTGTCAATGGGCCAGAGTGATGCCTCAGGCACCGCTAGGCCAGTCCCACACTaGTGGCATTTTCTAATGCGG +
Preference number: 5 (lower is better)
Translates to: RLQTSHLSMGQSDASGTARPVPH*WHFLMR
Trigger: CCGCATTAGAAAATGCCACAAGTGTGGGACTGGCCT...AGCGGTGCCTGAGGCATCACTCTGGCCCATTGACAGATGAGAGGTCTGAAGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR CAA 90 bp TCTCCATCCACACTCCTACCCCAAACGGGCTTTGTGCTGCTCAATGGGGATTCGTTGAGTGGGAAGTTGTaGAACACAGGCCGCACGGGA +
Preference number: 5 (lower is better)
Translates to: SPSTLLPQTGFVLLNGDSLSGKL*NTGRTG
Trigger: TCCCGTGCGGCCTGTGTTCAACAACTTCCCACTCAA...CGAATCCCCATTGAGCAGCACAAAGCCCGTTTGGGGTAGGAGTGTGGATGGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389900.8
ENST00000389902.8
ENST00000425013.6
CDS-3UTR CAA 90 bp GATCCTCCCTGGGGAAGCACAGGGAGCATATTTAAGGTACCGAAGACAATCCTGGCCCCACCCCAATGGTaGTCGGACTCAGCTGTGTCT +
Preference number: 5 (lower is better)
Translates to: DPPWGSTGSIFKVPKTILAPPQW*SDSAVS
Trigger: AGACACAGCTGAGTCCGACAACCATTGGGGTGGGGC...CAGGATTGTCTTCGGTACCTTAAATATGCTCCCTGTGCTTCCCCAGGGAGGATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS TCA 90 bp CTCTGTAATCCCAGCTACTCAGGAGGCTCAGACCGGAGAATCATTTaGACCCAGGAGGCGGAGCTCGTGGTGAGTCGAGATTACGCCATT +
Preference number: 5 (lower is better)
Translates to: LCNPSYSGGSDRRII*TQEAELVVSRDYAI
Trigger: AATGGCGTAATCTCGACTCACCACGAGCTCCGCCTCCTGGGTTCAAATGATTCTCCGGTCTGAGCCTCCTGAGTAGCTGGGATTACAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411812.1
CDS GCA 90 bp AGCGGGCCCTGGGAATTCATGCTGAAACAACAAGCGGCCCAGTTCTaGTTCAGGCTGCCGTTCCTGAGGAACGACCTGGTTTGTTATTTC +
Preference number: 5 (lower is better)
Translates to: SGPWEFMLKQQAAQF*FRLPFLRNDLVCYF
Trigger: GAAATAACAAACCAGGTCGTTCCTCAGGAACGGCAGCCTGAAGCAGAACTGGGCCGCTTGTTGTTTCAGCATGAATTCCCAGGGCCCGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389900.8
ENST00000389902.8
ENST00000425013.6
CDS-3UTR CAA 90 bp GTAGGCTGCCGCAACCTCCTCCTCGGCTTTTCGCTCATAGTACTTATACAGGATGGCCCATCTCGGAGATaGATCCACTCTTGTCCCCGA +
Preference number: 5 (lower is better)
Translates to: VGCRNLLLGFSLIVLIQDGPSRR*IHSCPR
Trigger: TCGGGGACAAGAGTGGATCAATCTCCGAGATGGGCC...ATCCTGTATAAGTACTATGAGCGAAAAGCCGAGGAGGAGGTTGCGGCAGCCTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389900.8
CDS-3UTR CAA 90 bp CAGGTTGTGCTCCAGGGGCATGTGGATGGGACCGAAGTCATAGTTGACCCGCACAATGTCATTTGCTGCTaGGTTATGACTCGGTCCAGG +
Preference number: 5 (lower is better)
Translates to: QVVLQGHVDGTEVIVDPHNVICC*VMTRSR
Trigger: CCTGGACCGAGTCATAACCAAGCAGCAAATGACATT...GTGCGGGTCAACTATGACTTCGGTCCCATCCACATGCCCCTGGAGCACAACCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389900.8
CDS-3UTR CAA 90 bp TGCACCTTCTCCACAGGCTTCTCCAGCGGGGGTCCAATGCGTTTGAAGGTGTTCCTTGAGATTCTTGCATaGGAAAGGCTGGACCTGGCT +
Preference number: 5 (lower is better)
Translates to: CTFSTGFSSGGPMRLKVFLEILA*ERLDLA
Trigger: AGCCAGGTCCAGCCTTTCCAATGCAAGAATCTCAAG...GAACACCTTCAAACGCATTGGACCCCCGCTGGAGAAGCCTGTGGAGAAGGTGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389900.8
CDS-3UTR CAA 90 bp ATGCAGCCCCACCCCAATGGTTGTCGGACTCAGCTGTGTCTGAGGTCTGTGAACCTTGAGATTCTTGCATaGGAAAGGCTGGACCTGGCT +
Preference number: 5 (lower is better)
Translates to: MQPHPNGCRTQLCLRSVNLEILA*ERLDLA
Trigger: AGCCAGGTCCAGCCTTTCCAATGCAAGAATCTCAAG...GTTCACAGACCTCAGACACAGCTGAGTCCGACAACCATTGGGGTGGGGCTGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR CAA 90 bp TCCAGCTCACTGGTTGGGAACGAACACGTGCAGCTGCCTTCCATGCAGCTGAGCTACCTCTGCAGCTTCTaGCCCCCAAATGTTTTCCAA +
Preference number: 5 (lower is better)
Translates to: SSSLVGNEHVQLPSMQLSYLCSF*PPNVFQ
Trigger: TTGGAAAACATTTGGGGGCAAGAAGCTGCAGAGGTA...GCTCAGCTGCATGGAAGGCAGCTGCACGTGTTCGTTCCCAACCAGTGAGCTGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389900.8
CDS-3UTR CAA 90 bp TTCAGGCTAGTAGCAAAGTTCAGGCAGTCCAACAGGTATGGGCGCCAGCAAGGATCCAGAGAGAGCATCTaGAACACTCCTGGCAAGGGG +
Preference number: 5 (lower is better)
Translates to: FRLVAKFRQSNRYGRQQGSRESI*NTPGKG
Trigger: CCCCTTGCCAGGAGTGTTCAAGATGCTCTCTCTGGA...TCCTTGCTGGCGCCCATACCTGTTGGACTGCCTGAACTTTGCTACTAGCCTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR CAA 90 bp ACAGCATCTTGGCCCTCACAGCTGTGGCAGTGCCTCTGCGGGCCATGGTCCCAGCTACATCTGGAAATCTaGCTTCCGTTTCTTTCACTA +
Preference number: 5 (lower is better)
Translates to: TASWPSQLWQCLCGPWSQLHLEI*LPFLSL
Trigger: TAGTGAAAGAAACGGAAGCAAGATTTCCAGATGTAG...CTGGGACCATGGCCCGCAGAGGCACTGCCACAGCTGTGAGGGCCAAGATGCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR CAA 90 bp GAGGGGAGGGGCAGTTCACATCGCAGCTCTCTCCGAACTCCACCATTTGGGACGTCCGAACTCCACCATTaGGGACGTCTTTATTATGGA +
Preference number: 5 (lower is better)
Translates to: EGRGSSHRSSLRTPPFGTSELHH*GRLYYG
Trigger: TCCATAATAAAGACGTCCCAAATGGTGGAGTTCGGA...CGTCCCAAATGGTGGAGTTCGGAGAGAGCTGCGATGTGAACTGCCCCTCCCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR CAA 90 bp AGGCTTCAGACCTCTCATCTGTCAATGGGCCAGAGTGATGCCTCAGGCACCGCTGGGTTCTCTTTCTGTTaGGCCACTTGGCTTAGTGAA +
Preference number: 5 (lower is better)
Translates to: RLQTSHLSMGQSDASGTAGFSFC*ATWLSE
Trigger: TTCACTAAGCCAAGTGGCCAAACAGAAAGAGAACCC...AGCGGTGCCTGAGGCATCACTCTGGCCCATTGACAGATGAGAGGTCTGAAGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR CAA 90 bp CCAGGAAGGCTTCAGACCTCTCATCTGTCAATGGGCCAGAGTGATGCCTCAGGCAATGTCATTTGCTGCTaGGTTATGACTCGGTCCAGG +
Preference number: 5 (lower is better)
Translates to: PGRLQTSHLSMGQSDASGNVICC*VMTRSR
Trigger: CCTGGACCGAGTCATAACCAAGCAGCAAATGACATT...GCCTGAGGCATCACTCTGGCCCATTGACAGATGAGAGGTCTGAAGCCTTCCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR CAA 90 bp CCAGGAAGGCTTCAGACCTCTCATCTGTCAATGGGCCAGAGTGATGCCTCAGGCTATTTCACGGGGCTGTaGGTTCAGAGACTGGAAGTA +
Preference number: 5 (lower is better)
Translates to: PGRLQTSHLSMGQSDASGYFTGL*VQRLEV
Trigger: TACTTCCAGTCTCTGAACCAACAGCCCCGTGAAATA...GCCTGAGGCATCACTCTGGCCCATTGACAGATGAGAGGTCTGAAGCCTTCCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR CAA 90 bp CAGCTCCTCGAATGGAAATTCCCCATAGCAGCAGCGACACTCAATCAGCTGGCCATAGAACTCCTGCTCTaGTTGCACAGCTGGAAGGAG +
Preference number: 5 (lower is better)
Translates to: QLLEWKFPIAAATLNQLAIELLL*LHSWKE
Trigger: CTCCTTCCAGCTGTGCAACAAGAGCAGGAGTTCTAT...GGCCAGCTGATTGAGTGTCGCTGCTGCTATGGGGAATTTCCATTCGAGGAGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389900.8
CDS-3UTR CAA 90 bp TCTCCATCCACACTCCTACCCCAAACGGGCTTTGTGCTGCTCAATGGGGATTCGATAGAACTCCTGCTCTaGTTGCACAGCTGGAAGGAG +
Preference number: 5 (lower is better)
Translates to: SPSTLLPQTGFVLLNGDSIELLL*LHSWKE
Trigger: CTCCTTCCAGCTGTGCAACAAGAGCAGGAGTTCTAT...CGAATCCCCATTGAGCAGCACAAAGCCCGTTTGGGGTAGGAGTGTGGATGGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389900.8
ENST00000389902.8
ENST00000425013.6
CDS-3UTR CAA 90 bp GGGTTCTCCATCCACACTCCTACCCCAAACGGGCTTTGTGCTGCTCAATGGGGATCCAAAGACTGCCTCTaGGGCATATCTGATGAGACA +
Preference number: 5 (lower is better)
Translates to: GFSIHTPTPNGLCAAQWGSKDCL*GISDET
Trigger: TGTCTCATCAGATATGCCCAAGAGGCAGTCTTTGGA...TCCCCATTGAGCAGCACAAAGCCCGTTTGGGGTAGGAGTGTGGATGGAGAACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389900.8
ENST00000389902.8
ENST00000425013.6
CDS-3UTR CAA 90 bp CCAGGAAGGCTTCAGACCTCTCATCTGTCAATGGGCCAGAGTGATGCCTCAGGCTCCAAAGACTGCCTCTaGGGCATATCTGATGAGACA +
Preference number: 5 (lower is better)
Translates to: PGRLQTSHLSMGQSDASGSKDCL*GISDET
Trigger: TGTCTCATCAGATATGCCCAAGAGGCAGTCTTTGGA...GCCTGAGGCATCACTCTGGCCCATTGACAGATGAGAGGTCTGAAGCCTTCCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR CAA 90 bp CCTACCCTTCAAGCTGACTTAGGATGCAATGGTACAGACACCAGCCTTGGGGGATTGCAGCCTTCAGATTaGATGAGGCCAGTCCCACAC +
Preference number: 5 (lower is better)
Translates to: PTLQADLGCNGTDTSLGGLQPSD*MRPVPH
Trigger: GTGTGGGACTGGCCTCATCAAATCTGAAGGCTGCAA...TCCCCCAAGGCTGGTGTCTGTACCATTGCATCCTAAGTCAGCTTGAAGGGTAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389900.8
ENST00000389902.8
ENST00000425013.6
CDS-3UTR CAA 90 bp TTCAGGCTAGTAGCAAAGTTCAGGCAGTCCAACAGGTATGGGCGCCAGCAAGGAGGGGGTCCAATGCGTTaGAAGGTGTTCTCTCCATTC +
Preference number: 5 (lower is better)
Translates to: FRLVAKFRQSNRYGRQQGGGPMR*KVFSPF
Trigger: GAATGGAGAGAACACCTTCAAACGCATTGGACCCCC...TCCTTGCTGGCGCCCATACCTGTTGGACTGCCTGAACTTTGCTACTAGCCTGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR CAA 90 bp TCGGAGATTGATCCACTCTGTAATCCCAGCTACTCAGGAGGCTCAGACCGGAGAGGCCCATCTCGGAGATaGATCCACTCTGTAATCCCA +
Preference number: 5 (lower is better)
Translates to: SEIDPLCNPSYSGGSDRRGPSRR*IHSVIP
Trigger: TGGGATTACAGAGTGGATCAATCTCCGAGATGGGCC...TCTCCGGTCTGAGCCTCCTGAGTAGCTGGGATTACAGAGTGGATCAATCTCCGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411812.1
CDS-3UTR CAA 90 bp CCTACCCTTCAAGCTGACTTAGGATGCAATGGTACAGACACCAGCCTTGGGGGAGAGATTGATCCACTCTaGTCCCCGATGGCAGTGAAA +
Preference number: 5 (lower is better)
Translates to: PTLQADLGCNGTDTSLGGEIDPL*SPMAVK
Trigger: TTTCACTGCCATCGGGGACAAGAGTGGATCAATCTC...TCCCCCAAGGCTGGTGTCTGTACCATTGCATCCTAAGTCAGCTTGAAGGGTAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389900.8
ENST00000389902.8
ENST00000425013.6
CDS-3UTR CAA 90 bp ACCGAGGATGAGAAAGTTAGGCGGCAACAGAACAAAACCCCCGCCGCGAGATGGGCTCTTCATCATCACTaGCTAACTGCTGGTCTTCAA +
Preference number: 5 (lower is better)
Translates to: TEDEKVRRQQNKTPAARWALHHH*LTAGLQ
Trigger: TTGAAGACCAGCAGTTAGCAAGTGATGATGAAGAGC...CCATCTCGCGGCGGGGGTTTTGTTCTGTTGCCGCCTAACTTTCTCATCCTCGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR CAA 90 bp TTCAGGCTAGTAGCAAAGTTCAGGCAGTCCAACAGGTATGGGCGCCAGCAAGGAATAGAACTCCTGCTCTaGTTGCACAGCTGGAAGGAG +
Preference number: 5 (lower is better)
Translates to: FRLVAKFRQSNRYGRQQGIELLL*LHSWKE
Trigger: CTCCTTCCAGCTGTGCAACAAGAGCAGGAGTTCTAT...TCCTTGCTGGCGCCCATACCTGTTGGACTGCCTGAACTTTGCTACTAGCCTGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR CAA 90 bp GTAGGCTGCCGCAACCTCCTCCTCGGCTTTTCGCTCATAGTACTTATACAGGATAGGCCAGTCCCACACTaGTGGCATTTTCTAATGCGG +
Preference number: 5 (lower is better)
Translates to: VGCRNLLLGFSLIVLIQDRPVPH*WHFLMR
Trigger: CCGCATTAGAAAATGCCACAAGTGTGGGACTGGCCT...ATCCTGTATAAGTACTATGAGCGAAAAGCCGAGGAGGAGGTTGCGGCAGCCTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389900.8
CDS-3UTR CAA 90 bp AACCTCCTCCTCGGCTTTTCGCTCATAGTACTTATACAGGATGGTCTGGGGGAGGGGGGTCCAATGCGTTaGAAGGTGTTCTCTCCATTC +
Preference number: 5 (lower is better)
Translates to: NLLLGFSLIVLIQDGLGEGGPMR*KVFSPF
Trigger: GAATGGAGAGAACACCTTCAAACGCATTGGACCCCC...CTCCCCCAGACCATCCTGTATAAGTACTATGAGCGAAAAGCCGAGGAGGAGGTT
52% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000389900.8
CDS-3UTR CAA 90 bp GTAGGCTGCCGCAACCTCCTCCTCGGCTTTTCGCTCATAGTACTTATACAGGATTACCCCAAACGGGCTTaGTGCTGCTCAATGGGGATT +
Preference number: 5 (lower is better)
Translates to: VGCRNLLLGFSLIVLIQDYPKRA*CCSMGI
Trigger: AATCCCCATTGAGCAGCACAAAGCCCGTTTGGGGTA...ATCCTGTATAAGTACTATGAGCGAAAAGCCGAGGAGGAGGTTGCGGCAGCCTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000389900.8
CDS-3UTR CAA 90 bp GCTGGCTGGTCTGAAGACCCCCAGTGCTTCTCTCCCCAATGCTGTCACTGGTCCCTACATCTGGAAATCTaGCTTCCGTTTCTTTCACTA +
Preference number: 5 (lower is better)
Translates to: AGWSEDPQCFSPQCCHWSLHLEI*LPFLSL
Trigger: TAGTGAAAGAAACGGAAGCAAGATTTCCAGATGTAG...GGACCAGTGACAGCATTGGGGAGAGAAGCACTGGGGGTCTTCAGACCAGCCAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR CAA 90 bp CCGCAACCTCCTCCTCGGCTTTTCGCTCATAGTACTTATACAGGATGGTCTGGGGGGTTCTCTTTCTGTTaGGCCACTTGGCTTAGTGAA +
Preference number: 5 (lower is better)
Translates to: PQPPPRLFAHSTYTGWSGGFSFC*ATWLSE
Trigger: TTCACTAAGCCAAGTGGCCAAACAGAAAGAGAACCC...CCCAGACCATCCTGTATAAGTACTATGAGCGAAAAGCCGAGGAGGAGGTTGCGG
51% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000389900.8
CDS-3UTR CAA 90 bp CCTACCCTTCAAGCTGACTTAGGATGCAATGGTACAGACACCAGCCTTGGGGGATGCTCTGATCTGGGGTaGACAATGTCATTTGCTGCT +
Preference number: 5 (lower is better)
Translates to: PTLQADLGCNGTDTSLGGCSDLG*TMSFAA
Trigger: AGCAGCAAATGACATTGTCAACCCCAGATCAGAGCA...TCCCCCAAGGCTGGTGTCTGTACCATTGCATCCTAAGTCAGCTTGAAGGGTAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389900.8
ENST00000389902.8
ENST00000425013.6
CDS-3UTR CAA 90 bp TTCAGGCTAGTAGCAAAGTTCAGGCAGTCCAACAGGTATGGGCGCCAGCAAGGATGCTCTGATCTGGGGTaGACAATGTCATTTGCTGCT +
Preference number: 5 (lower is better)
Translates to: FRLVAKFRQSNRYGRQQGCSDLG*TMSFAA
Trigger: AGCAGCAAATGACATTGTCAACCCCAGATCAGAGCA...TCCTTGCTGGCGCCCATACCTGTTGGACTGCCTGAACTTTGCTACTAGCCTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR CAA 90 bp CCGCAACCTCCTCCTCGGCTTTTCGCTCATAGTACTTATACAGGATGGTCTGGGTATTTCACGGGGCTGTaGGTTCAGAGACTGGAAGTA +
Preference number: 5 (lower is better)
Translates to: PQPPPRLFAHSTYTGWSGYFTGL*VQRLEV
Trigger: TACTTCCAGTCTCTGAACCAACAGCCCCGTGAAATA...CCCAGACCATCCTGTATAAGTACTATGAGCGAAAAGCCGAGGAGGAGGTTGCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389900.8
CDS-3UTR CAA 90 bp GTGATGCCTGTGGCCAGGAAGGCTTCAGACCTCTCATCTGTCAATGGGCCAGAGCAGCTGGCCATCCTTTaGATACTGTTCTTCATTCAT +
Preference number: 5 (lower is better)
Translates to: VMPVARKASDLSSVNGPEQLAIL*ILFFIH
Trigger: ATGAATGAAGAACAGTATCAAAAGGATGGCCAGCTG...CTCTGGCCCATTGACAGATGAGAGGTCTGAAGCCTTCCTGGCCACAGGCATCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR CAA 90 bp GGGTTCTCCATCCACACTCCTACCCCAAACGGGCTTTGTGCTGCTCAATGGGGACAGCTGGCCATCCTTTaGATACTGTTCTTCATTCAT +
Preference number: 5 (lower is better)
Translates to: GFSIHTPTPNGLCAAQWGQLAIL*ILFFIH
Trigger: ATGAATGAAGAACAGTATCAAAAGGATGGCCAGCTG...TCCCCATTGAGCAGCACAAAGCCCGTTTGGGGTAGGAGTGTGGATGGAGAACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389900.8
ENST00000389902.8
ENST00000425013.6
CDS-3UTR CAA 90 bp CTCTCCGAACTCCACCATTTGGGACGTCTTTATTATGGATCCGTCCACTCTTCCGGGGGTCCAATGCGTTaGAAGGTGTTCTCTCCATTC +
Preference number: 5 (lower is better)
Translates to: LSELHHLGRLYYGSVHSSGGPMR*KVFSPF
Trigger: GAATGGAGAGAACACCTTCAAACGCATTGGACCCCC...GGAAGAGTGGACGGATCCATAATAAAGACGTCCCAAATGGTGGAGTTCGGAGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR CAA 90 bp AGCATTGGAATCCTTTCCTCATCTGAGGAGTCAGATATGGTGATGGGCCCATCTAGACCGGAGAATCATTaGAACCCAGGAGGCGGAGCT +
Preference number: 5 (lower is better)
Translates to: SIGILSSSEESDMVMGPSRPENH*NPGGGA
Trigger: AGCTCCGCCTCCTGGGTTCAAATGATTCTCCGGTCT...AGATGGGCCCATCACCATATCTGACTCCTCAGATGAGGAAAGGATTCCAATGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411812.1
CDS TCA 90 bp TTCTGCTCTGATCTGGGGTTGACAATGTCATTTGCTGCTTGGTTATaGCTCGGTCCAGGCTTGGGTTCTCTTTCTGTTTGGCCACTTGGC +
Preference number: 5 (lower is better)
Translates to: FCSDLGLTMSFAAWL*LGPGLGSLSVWPLG
Trigger: GCCAAGTGGCCAAACAGAAAGAGAACCCAAGCCTGGACCGAGTCATAACCAAGCAGCAAATGACATTGTCAACCCCAGATCAGAGCAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389900.8
ENST00000389902.8
ENST00000425013.6
CDS-3UTR CAA 90 bp AACCTCCTCCTCGGCTTTTCGCTCATAGTACTTATACAGGATGGTCTGGGGGAGTGCTCTGATCTGGGGTaGACAATGTCATTTGCTGCT +
Preference number: 5 (lower is better)
Translates to: NLLLGFSLIVLIQDGLGECSDLG*TMSFAA
Trigger: AGCAGCAAATGACATTGTCAACCCCAGATCAGAGCA...CTCCCCCAGACCATCCTGTATAAGTACTATGAGCGAAAAGCCGAGGAGGAGGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000389900.8
CDS-3UTR CAA 90 bp AGGAGGCCCAAGATCCAGAAATTCACCGTAGTCATCCTCAGAATCATCTTCTGTGTCGAGATTACGCCATaGCACTCTGGCCTGGGCAAT +
Preference number: 5 (lower is better)
Translates to: RRPKIQKFTVVILRIIFCVEITP*HSGLGN
Trigger: ATTGCCCAGGCCAGAGTGCAATGGCGTAATCTCGAC...ACAGAAGATGATTCTGAGGATGACTACGGTGAATTTCTGGATCTTGGGCCTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411812.1
CDS-3UTR CAA 90 bp GATCCTCCCTGGGGAAGCACAGGGAGCATATTTAAGGTACCGAAGACAATCCTGCTGACTCTCCTAGATTaGATAACAGCTCTGTCTCTG +
Preference number: 5 (lower is better)
Translates to: DPPWGSTGSIFKVPKTILLTLLD*ITALSL
Trigger: CAGAGACAGAGCTGTTATCAAATCTAGGAGAGTCAG...CAGGATTGTCTTCGGTACCTTAAATATGCTCCCTGTGCTTCCCCAGGGAGGATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR CAA 90 bp GTCATATCCATTAATAGAAACTCGACAGAGGTAGCACATCTGGGCACCACAGCGGAGGAACGACCTGGTTaGTTATTTCACGGGGCTGTT +
Preference number: 5 (lower is better)
Translates to: VISINRNSTEVAHLGTTAEERPG*LFHGAV
Trigger: AACAGCCCCGTGAAATAACAAACCAGGTCGTTCCTC...CGCTGTGGTGCCCAGATGTGCTACCTCTGTCGAGTTTCTATTAATGGATATGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389900.8
CDS-3UTR CAA 90 bp AACCTCCTCCTCGGCTTTTCGCTCATAGTACTTATACAGGATGGTCTGGGGGAGGCTCTTCATCATCACTaGCTAACTGCTGGTCTTCAA +
Preference number: 5 (lower is better)
Translates to: NLLLGFSLIVLIQDGLGEALHHH*LTAGLQ
Trigger: TTGAAGACCAGCAGTTAGCAAGTGATGATGAAGAGC...CTCCCCCAGACCATCCTGTATAAGTACTATGAGCGAAAAGCCGAGGAGGAGGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389900.8
CDS-3UTR CAA 90 bp CCTACCCTTCAAGCTGACTTAGGATGCAATGGTACAGACACCAGCCTTGGGGGACAGCTGGCCATCCTTTaGATACTGTTCTTCATTCAT +
Preference number: 5 (lower is better)
Translates to: PTLQADLGCNGTDTSLGGQLAIL*ILFFIH
Trigger: ATGAATGAAGAACAGTATCAAAAGGATGGCCAGCTG...TCCCCCAAGGCTGGTGTCTGTACCATTGCATCCTAAGTCAGCTTGAAGGGTAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389900.8
ENST00000389902.8
ENST00000425013.6
CDS-3UTR CAA 90 bp GATCCTCCCTGGGGAAGCACAGGGAGCATATTTAAGGTACCGAAGACAATCCTGATAGAGGTACGGTACTaGATGTCGTCTTTTTCAGCC +
Preference number: 5 (lower is better)
Translates to: DPPWGSTGSIFKVPKTILIEVRY*MSSFSA
Trigger: GGCTGAAAAAGACGACATCAAGTACCGTACCTCTAT...CAGGATTGTCTTCGGTACCTTAAATATGCTCCCTGTGCTTCCCCAGGGAGGATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR CAA 90 bp CTGGATTTCCTCAATAAGCTTCTCATCATCTTCAGTGGGATCGGTCCAGAGAGACGGCAAGACATGCGGTaGCAGCCTTCAGATTTGATG +
Preference number: 5 (lower is better)
Translates to: LDFLNKLLIIFSGIGPERRQDMR*QPSDLM
Trigger: CATCAAATCTGAAGGCTGCAACCGCATGTCTTGCCG...TCTCTCTGGACCGATCCCACTGAAGATGATGAGAAGCTTATTGAGGAAATCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389900.8
CDS-3UTR CAA 90 bp CTGGATTTCCTCAATAAGCTTCTCATCATCTTCAGTGGGATCGGTCCAGAGAGAATGTTGAGTGGGAAGTaGTTGAACACAGGCCGCACG +
Preference number: 5 (lower is better)
Translates to: LDFLNKLLIIFSGIGPERMLSGK*LNTGRT
Trigger: CGTGCGGCCTGTGTTCAACAACTTCCCACTCAACAT...TCTCTCTGGACCGATCCCACTGAAGATGATGAGAAGCTTATTGAGGAAATCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389900.8
CDS CCA 90 bp CTTGATCTACCTCTGCAGCTTCTTGCCCCCAAATGTTTTCCAAATTaGGCTCTTGAGATTCTTGCATTGGAAAGGCTGGACCTGGCTCTT +
Preference number: 5 (lower is better)
Translates to: LDLPLQLLAPKCFPN*ALEILALERLDLAL
Trigger: AAGAGCCAGGTCCAGCCTTTCCAATGCAAGAATCTCAAGAGCCCAATTTGGAAAACATTTGGGGGCAAGAAGCTGCAGAGGTAGATCAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389900.8
ENST00000389902.8
ENST00000425013.6
CDS CCA 90 bp TCAGAGACTGGAAGTAAGGATGATCTAACCAGCAGTCTTCTTCGATaGCCTGATCATCTGCTAGAGCAGCTGACTCTCCTAGATTTGATA +
Preference number: 5 (lower is better)
Translates to: SETGSKDDLTSSLLR*PDHLLEQLTLLDLI
Trigger: TATCAAATCTAGGAGAGTCAGCTGCTCTAGCAGATGATCAGGCCATCGAAGAAGACTGCTGGTTAGATCATCCTTACTTCCAGTCTCTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389900.8
ENST00000389902.8
ENST00000425013.6
CDS-3UTR CAA 90 bp CTGGATTTCCTCAATAAGCTTCTCATCATCTTCAGTGGGATCGGTCCAGAGAGACTGACTCTCCTAGATTaGATAACAGCTCTGTCTCTG +
Preference number: 5 (lower is better)
Translates to: LDFLNKLLIIFSGIGPERLTLLD*ITALSL
Trigger: CAGAGACAGAGCTGTTATCAAATCTAGGAGAGTCAG...TCTCTCTGGACCGATCCCACTGAAGATGATGAGAAGCTTATTGAGGAAATCCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389900.8
CDS-3UTR CAA 90 bp TCTGATGAGACACTCTTTGCAGAACAAGTGAGCATCTGCGCACTGCGTCAGCTCCAGATCCATTCTTCATaGCTTCAACAAATATTGAGC +
Preference number: 5 (lower is better)
Translates to: SDETLFAEQVSICALRQLQIHSS*LQQILS
Trigger: GCTCAATATTTGTTGAAGCAATGAAGAATGGATCTG...GAGCTGACGCAGTGCGCAGATGCTCACTTGTTCTGCAAAGAGTGTCTCATCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389900.8
CDS-3UTR CAA 90 bp CTGGATTTCCTCAATAAGCTTCTCATCATCTTCAGTGGGATCGGTCCAGAGAGAATAGAGGTACGGTACTaGATGTCGTCTTTTTCAGCC +
Preference number: 5 (lower is better)
Translates to: LDFLNKLLIIFSGIGPERIEVRY*MSSFSA
Trigger: GGCTGAAAAAGACGACATCAAGTACCGTACCTCTAT...TCTCTCTGGACCGATCCCACTGAAGATGATGAGAAGCTTATTGAGGAAATCCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389900.8
CDS TCA 90 bp TGTGTAAAGAAGGCTACCTTCTTCCAAGATGATGACTTTCTGCTCTaGTCTGGGGTTGACAATGTCATTTGCTGCTTGGTTATGACTCGG +
Preference number: 5 (lower is better)
Translates to: CVKKATFFQDDDFLL*SGVDNVICCLVMTR
Trigger: CCGAGTCATAACCAAGCAGCAAATGACATTGTCAACCCCAGATCAGAGCAGAAAGTCATCATCTTGGAAGAAGGTAGCCTTCTTTACACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389900.8
ENST00000389902.8
ENST00000425013.6
CDS TCA 90 bp GGAAATCTTGCTTCCGTTTCTTTCACTAGTAGTTCAACGAGCTCTTaGTCTACCTCTGCAGCTTCTTGCCCCCAAATGTTTTCCAAATTG +
Preference number: 5 (lower is better)
Translates to: GNLASVSFTSSSTSS*STSAASCPQMFSKL
Trigger: CAATTTGGAAAACATTTGGGGGCAAGAAGCTGCAGAGGTAGATCAAGAGCTCGTTGAACTACTAGTGAAAGAAACGGAAGCAAGATTTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS TCA 90 bp ATGGCTCTTGGAGGACAGTGTATTACTTTAAGCCTCAACAGATGCTaGCTAAATGTGGCTGCTGTTTTAGATGTCATCTCTCACCAGAAC +
Preference number: 5 (lower is better)
Translates to: MALGGQCITLSLNRC*LNVAAVLDVISHQN
Trigger: GTTCTGGTGAGAGATGACATCTAAAACAGCAGCCACATTTAGTCAGCATCTGTTGAGGCTTAAAGTAATACACTGTCCTCCAAGAGCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469375.1
CDS-3UTR CAA 90 bp ACAAAAGTCCCAGTTACATATGATACAGGCTTTTTACACACAGTAGTTGAAACGAGGCCAGTCCCACACTaGTGGCATTTTCTAATGCGG +
Preference number: 5 (lower is better)
Translates to: TKVPVTYDTGFLHTVVETRPVPH*WHFLMR
Trigger: CCGCATTAGAAAATGCCACAAGTGTGGGACTGGCCT...CGTTTCAACTACTGTGTGTAAAAAGCCTGTATCATATGTAACTGGGACTTTTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR CAA 90 bp ACAAAAGTCCCAGTTACATATGATACAGGCTTTTTACACACAGTAGTTGAAACGGAGGAACGACCTGGTTaGTTATTTCACGGGGCTGTT +
Preference number: 5 (lower is better)
Translates to: TKVPVTYDTGFLHTVVETEERPG*LFHGAV
Trigger: AACAGCCCCGTGAAATAACAAACCAGGTCGTTCCTC...CGTTTCAACTACTGTGTGTAAAAAGCCTGTATCATATGTAACTGGGACTTTTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR CAA 90 bp ACAAAAGTCCCAGTTACATATGATACAGGCTTTTTACACACAGTAGTTGAAACGCTTGAGATTCTTGCATaGGAAAGGCTGGACCTGGCT +
Preference number: 5 (lower is better)
Translates to: TKVPVTYDTGFLHTVVETLEILA*ERLDLA
Trigger: AGCCAGGTCCAGCCTTTCCAATGCAAGAATCTCAAG...CGTTTCAACTACTGTGTGTAAAAAGCCTGTATCATATGTAACTGGGACTTTTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS TCA 90 bp AATATTGAGCATCTCGTTTCTTTCACTAGTAGTTCAACGAGCTCTTaGTCTACCTCTGCAGCTTCTTGCCCCCAAATGTTTTCCAAATTG +
Preference number: 5 (lower is better)
Translates to: NIEHLVSFTSSSTSS*STSAASCPQMFSKL
Trigger: CAATTTGGAAAACATTTGGGGGCAAGAAGCTGCAGAGGTAGATCAAGAGCTCGTTGAACTACTAGTGAAAGAAACGAGATGCTCAATATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389900.8
CDS-3UTR CAA 90 bp ACAAAAGTCCCAGTTACATATGATACAGGCTTTTTACACACAGTAGTTGAAACGTACCTCTGCAGCTTCTaGCCCCCAAATGTTTTCCAA +
Preference number: 5 (lower is better)
Translates to: TKVPVTYDTGFLHTVVETYLCSF*PPNVFQ
Trigger: TTGGAAAACATTTGGGGGCAAGAAGCTGCAGAGGTA...CGTTTCAACTACTGTGTGTAAAAAGCCTGTATCATATGTAACTGGGACTTTTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS-3UTR CAA 90 bp ACAAAAGTCCCAGTTACATATGATACAGGCTTTTTACACACAGTAGTTGAAACGGCTCTTCATCATCACTaGCTAACTGCTGGTCTTCAA +
Preference number: 5 (lower is better)
Translates to: TKVPVTYDTGFLHTVVETALHHH*LTAGLQ
Trigger: TTGAAGACCAGCAGTTAGCAAGTGATGATGAAGAGC...CGTTTCAACTACTGTGTGTAAAAAGCCTGTATCATATGTAACTGGGACTTTTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS CCA 90 bp CATCTCTTTTTACTTCTCATTTGGCTTGTACAGAAGAATGGCTCTTaGAGGACAGTGTATTACTTTAAGCCTCAACAGATGCTGACTAAA +
Preference number: 5 (lower is better)
Translates to: HLFLLLIWLVQKNGS*RTVYYFKPQQMLTK
Trigger: TTTAGTCAGCATCTGTTGAGGCTTAAAGTAATACACTGTCCTCCAAGAGCCATTCTTCTGTACAAGCCAAATGAGAAGTAAAAAGAGATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000469375.1
CDS TCA 72 bp TCCGGCCTTGGAAAAGCGGGCCCTGGGAATTCATGCTaGAACAACAAGCGGCCCAGTTCTGCTTCAGGCTGC +
Preference number: 6 (lower is better)
Translates to: SGLGKAGPGNSC*NNKRPSSASGC
Trigger: GCAGCCTGAAGCAGAACTGGGCCGCTTGTTGTTTCAGCATGAATTCCCAGGGCCCGCTTTTCCAAGGCCGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389900.8
ENST00000389902.8
ENST00000425013.6
CDS CCA 72 bp ACCTTGCTGGGGTTCCGGCCTTGGAAAAGCGGGCCCTaGGAATTCATGCTGAAACAACAAGCGGCCCAGTTC +
Preference number: 6 (lower is better)
Translates to: TLLGFRPWKSGP*EFMLKQQAAQF
Trigger: GAACTGGGCCGCTTGTTGTTTCAGCATGAATTCCCAGGGCCCGCTTTTCCAAGGCCGGAACCCCAGCAAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389900.8
ENST00000389902.8
ENST00000425013.6
CDS TCA 72 bp AACAAGCGGCCCAGTTCTGCTTCAGGCTGCCGTTCCTaGGGAACGACCTGGTTTGTTATTTCACGGGGCTGT +
Preference number: 6 (lower is better)
Translates to: NKRPSSASGCRS*GTTWFVISRGC
Trigger: ACAGCCCCGTGAAATAACAAACCAGGTCGTTCCTCAGGAACGGCAGCCTGAAGCAGAACTGGGCCGCTTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389900.8
ENST00000389902.8
ENST00000425013.6
CDS GCA 72 bp TGGGAATTCATGCTGAAACAACAAGCGGCCCAGTTCTaGTTCAGGCTGCCGTTCCTGAGGAACGACCTGGTT +
Preference number: 6 (lower is better)
Translates to: WEFMLKQQAAQF*FRLPFLRNDLV
Trigger: AACCAGGTCGTTCCTCAGGAACGGCAGCCTGAAGCAGAACTGGGCCGCTTGTTGTTTCAGCATGAATTCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389900.8
ENST00000389902.8
ENST00000425013.6
CDS CAA 72 bp CTGCTTCAGGCTGCCGTTCCTGAGGAACGACCTGGTTaGTTATTTCACGGGGCTGTTGGTTCAGAGACTGGA +
Preference number: 6 (lower is better)
Translates to: LLQAAVPEERPG*LFHGAVGSETG
Trigger: TCCAGTCTCTGAACCAACAGCCCCGTGAAATAACAAACCAGGTCGTTCCTCAGGAACGGCAGCCTGAAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389900.8
ENST00000389902.8
ENST00000425013.6
CDS CAA 90 bp GGCCCAGTTCTGCTTCAGGCTGCCGTTCCTGAGGAACGACCTGGTTaGTTATTTCACGGGGCTGTTGGTTCAGAGACTGGAAGTAAGGAT +
Preference number: 6 (lower is better)
Translates to: GPVLLQAAVPEERPG*LFHGAVGSETGSKD
Trigger: ATCCTTACTTCCAGTCTCTGAACCAACAGCCCCGTGAAATAACAAACCAGGTCGTTCCTCAGGAACGGCAGCCTGAAGCAGAACTGGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389900.8
ENST00000389902.8
ENST00000425013.6
CDS GCA 72 bp AAGGCTGGACCTGGCTCTTCATCATCACTTGCTAACTaGTGGTCTTCAAACTCTCCTAGAGGATGGGCAGGC +
Preference number: 6 (lower is better)
Translates to: KAGPGSSSSLAN*WSSNSPRGWAG
Trigger: GCCTGCCCATCCTCTAGGAGAGTTTGAAGACCAGCAGTTAGCAAGTGATGATGAAGAGCCAGGTCCAGCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389900.8
ENST00000389902.8
ENST00000425013.6
CDS CCA 72 bp CGTGGTGAGTCGAGATTACGCCATTGCACTCTGGCCTaGGCAATGAGTAAAATTCCATCTTGTCCCCGATGG +
Preference number: 6 (lower is better)
Translates to: RGESRLRHCTLA*AMSKIPSCPRW
Trigger: CCATCGGGGACAAGATGGAATTTTACTCATTGCCCAGGCCAGAGTGCAATGGCGTAATCTCGACTCACCACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000411812.1
CDS CAA 90 bp TGCTGCTTGGTTATGACTCGGTCCAGGCTTGGGTTCTCTTTCTGTTaGGCCACTTGGCTTAGTGAATTCAGAGATTCCAGGAGGCCCAAG +
Preference number: 6 (lower is better)
Translates to: CCLVMTRSRLGFSFC*ATWLSEFRDSRRPK
Trigger: CTTGGGCCTCCTGGAATCTCTGAATTCACTAAGCCAAGTGGCCAAACAGAAAGAGAACCCAAGCCTGGACCGAGTCATAACCAAGCAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389900.8
ENST00000389902.8
ENST00000425013.6
CDS TCA 72 bp AATTGGCTGACTCTGAGAGAAATGAGGAAGATCTCCTaGACAGCTGGACCACACGGCTCTGGACTGGAAACC +
Preference number: 6 (lower is better)
Translates to: NWLTLREMRKIS*TAGPHGSGLET
Trigger: GGTTTCCAGTCCAGAGCCGTGTGGTCCAGCTGTTCAGGAGATCTTCCTCATTTCTCTCAGAGTCAGCCAATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484458.2
CDS CCA 72 bp GGCCTTTCTTCTCCCAACCTTTTCAGATCTTGCCACTaGGCAGCTGGTTTGATGAGATTGGGTCGTGATCTC +
Preference number: 6 (lower is better)
Translates to: GLSSPNLFRSCH*AAGLMRLGRDL
Trigger: GAGATCACGACCCAATCTCATCAAACCAGCTGCCCAGTGGCAAGATCTGAAAAGGTTGGGAGAAGAAAGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389902.8
CDS TCA 72 bp AAAGGAATCAAAGTTGACCTAGACGCTGAGATCAGGTaGCCACAGGATGGTGATGTCGTCACTCAAGTCGCC +
Preference number: 6 (lower is better)
Translates to: KGIKVDLDAEIR*PQDGDVVTQVA
Trigger: GGCGACTTGAGTGACGACATCACCATCCTGTGGTCACCTGATCTCAGCGTCTAGGTCAACTTTGATTCCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416985.5
CDS TCA 72 bp AGTCGAGATTACGCCATTGCACTCTGGCCTGGGCAATaGGTAAAATTCCATCTTGTCCCCGATGGCAGTGAA +
Preference number: 6 (lower is better)
Translates to: SRDYAIALWPGQ*VKFHLVPDGSE
Trigger: TTCACTGCCATCGGGGACAAGATGGAATTTTACTCATTGCCCAGGCCAGAGTGCAATGGCGTAATCTCGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000411812.1
CDS CAA 72 bp TTCCATGCAGCTGAGCTCCAACCGCTTCAGAAGGAATaGGCTGACTCTGAGAGAAATGAGGAAGATCTCCTG +
Preference number: 6 (lower is better)
Translates to: FHAAELQPLQKE*ADSERNEEDLL
Trigger: CAGGAGATCTTCCTCATTTCTCTCAGAGTCAGCCAATTCCTTCTGAAGCGGTTGGAGCTCAGCTGCATGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484458.2
CDS CAA 90 bp CTTCGATGGCCTGATCATCTGCTAGAGCAGCTGACTCTCCTAGATTaGATAACAGCTCTGTCTCTGAGTCTTCGGATGACTGGTTCTGAG +
Preference number: 6 (lower is better)
Translates to: LRWPDHLLEQLTLLD*ITALSLSLRMTGSE
Trigger: CTCAGAACCAGTCATCCGAAGACTCAGAGACAGAGCTGTTATCAAATCTAGGAGAGTCAGCTGCTCTAGCAGATGATCAGGCCATCGAAG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389900.8
ENST00000389902.8
ENST00000425013.6
CDS TCA 72 bp GATCTGGGGTTGACAATGTCATTTGCTGCTTGGTTATaGCTCGGTCCAGGCTTGGGTTCTCTTTCTGTTTGG +
Preference number: 6 (lower is better)
Translates to: DLGLTMSFAAWL*LGPGLGSLSVW
Trigger: CCAAACAGAAAGAGAACCCAAGCCTGGACCGAGTCATAACCAAGCAGCAAATGACATTGTCAACCCCAGATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389900.8
ENST00000389902.8
ENST00000425013.6
CDS CCA 72 bp GGAAGTAAGGATGATCTAACCAGCAGTCTTCTTCGATaGCCTGATCATCTGCTAGAGCAGCTGACTCTCCTA +
Preference number: 6 (lower is better)
Translates to: GSKDDLTSSLLR*PDHLLEQLTLL
Trigger: TAGGAGAGTCAGCTGCTCTAGCAGATGATCAGGCCATCGAAGAAGACTGCTGGTTAGATCATCCTTACTTCC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389900.8
ENST00000389902.8
ENST00000425013.6
CDS CCA 72 bp CCTCTGCAGCTTCTTGCCCCCAAATGTTTTCCAAATTaGGCTCTTGAGATTCTTGCATTGGAAAGGCTGGAC +
Preference number: 6 (lower is better)
Translates to: PLQLLAPKCFPN*ALEILALERLD
Trigger: GTCCAGCCTTTCCAATGCAAGAATCTCAAGAGCCCAATTTGGAAAACATTTGGGGGCAAGAAGCTGCAGAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389900.8
ENST00000389902.8
ENST00000425013.6
CDS CAA 72 bp GTTATGACTCGGTCCAGGCTTGGGTTCTCTTTCTGTTaGGCCACTTGGCTTAGTGAATTCAGAGATTCCAGG +
Preference number: 6 (lower is better)
Translates to: VMTRSRLGFSFC*ATWLSEFRDSR
Trigger: CCTGGAATCTCTGAATTCACTAAGCCAAGTGGCCAAACAGAAAGAGAACCCAAGCCTGGACCGAGTCATAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389900.8
ENST00000389902.8
ENST00000425013.6
CDS CAA 72 bp CTTTTTAGGCCTTTCTTCTCCCAACCTTTTCAGATCTaGCCACTGGGCAGCTGGTTTGATGAGATTGGGTCG +
Preference number: 6 (lower is better)
Translates to: LFRPFFSQPFQI*PLGSWFDEIGS
Trigger: CGACCCAATCTCATCAAACCAGCTGCCCAGTGGCAAGATCTGAAAAGGTTGGGAGAAGAAAGGCCTAAAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389902.8
CDS CAA 90 bp TACCTCTGCAGCTTCTTGCCCCCAAATGTTTTCCAAATTGGGCTCTaGAGATTCTTGCATTGGAAAGGCTGGACCTGGCTCTTCATCATC +
Preference number: 6 (lower is better)
Translates to: YLCSFLPPNVFQIGL*RFLHWKGWTWLFII
Trigger: GATGATGAAGAGCCAGGTCCAGCCTTTCCAATGCAAGAATCTCAAGAGCCCAATTTGGAAAACATTTGGGGGCAAGAAGCTGCAGAGGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389900.8
ENST00000389902.8
ENST00000425013.6
CDS CAA 90 bp CTTGCCCCCAAATGTTTTCCAAATTGGGCTCTTGAGATTCTTGCATaGGAAAGGCTGGACCTGGCTCTTCATCATCACTTGCTAACTGCT +
Preference number: 6 (lower is better)
Translates to: LAPKCFPNWALEILA*ERLDLALHHHLLTA
Trigger: AGCAGTTAGCAAGTGATGATGAAGAGCCAGGTCCAGCCTTTCCAATGCAAGAATCTCAAGAGCCCAATTTGGAAAACATTTGGGGGCAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389900.8
ENST00000389902.8
ENST00000425013.6
CDS TCA 72 bp TTGCCACTGGGCAGCTGGTTTGATGAGATTGGGTCGTaGTCTCTGAGGTTTATTTGTTTCTGTCAGGATGAC +
Preference number: 6 (lower is better)
Translates to: LPLGSWFDEIGS*SLRFICFCQDD
Trigger: GTCATCCTGACAGAAACAAATAAACCTCAGAGATCACGACCCAATCTCATCAAACCAGCTGCCCAGTGGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389902.8
CDS TCA 72 bp AAAGGAATCAAAGTTGACCTAGACGCTGAGATCAGGTaGCCACAGGATGGTGATGCGAAACATACAGCAGCA +
Preference number: 6 (lower is better)
Translates to: KGIKVDLDAEIR*PQDGDAKHTAA
Trigger: TGCTGCTGTATGTTTCGCATCACCATCCTGTGGTCACCTGATCTCAGCGTCTAGGTCAACTTTGATTCCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476345.1
CDS CAA 72 bp CCTGATCATCTGCTAGAGCAGCTGACTCTCCTAGATTaGATAACAGCTCTGTCTCTGAGTCTTCGGATGACT +
Preference number: 6 (lower is better)
Translates to: PDHLLEQLTLLD*ITALSLSLRMT
Trigger: AGTCATCCGAAGACTCAGAGACAGAGCTGTTATCAAATCTAGGAGAGTCAGCTGCTCTAGCAGATGATCAGG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389900.8
ENST00000389902.8
ENST00000425013.6
CDS CAA 72 bp CCCCCAAATGTTTTCCAAATTGGGCTCTTGAGATTCTaGCATTGGAAAGGCTGGACCTGGCTCTTCATCATC +
Preference number: 6 (lower is better)
Translates to: PPNVFQIGLLRF*HWKGWTWLFII
Trigger: GATGATGAAGAGCCAGGTCCAGCCTTTCCAATGCAAGAATCTCAAGAGCCCAATTTGGAAAACATTTGGGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389900.8
ENST00000389902.8
ENST00000425013.6
CDS TCA 72 bp GCTTCCGTTTCTTTCACTAGTAGTTCAACGAGCTCTTaGTCTACCTCTGCAGCTTCTTGCCCCCAAATGTTT +
Preference number: 6 (lower is better)
Translates to: ASVSFTSSSTSS*STSAASCPQMF
Trigger: AAACATTTGGGGGCAAGAAGCTGCAGAGGTAGATCAAGAGCTCGTTGAACTACTAGTGAAAGAAACGGAAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389902.8
ENST00000425013.6
CDS TCA 72 bp AAGGCTACCTTCTTCCAAGATGATGACTTTCTGCTCTaGTCTGGGGTTGACAATGTCATTTGCTGCTTGGTT +
Preference number: 6 (lower is better)
Translates to: KATFFQDDDFLL*SGVDNVICCLV
Trigger: AACCAAGCAGCAAATGACATTGTCAACCCCAGATCAGAGCAGAAAGTCATCATCTTGGAAGAAGGTAGCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389900.8
ENST00000389902.8
ENST00000425013.6
CDS TCA 72 bp CATCTCGTTTCTTTCACTAGTAGTTCAACGAGCTCTTaGTCTACCTCTGCAGCTTCTTGCCCCCAAATGTTT +
Preference number: 6 (lower is better)
Translates to: HLVSFTSSSTSS*STSAASCPQMF
Trigger: AAACATTTGGGGGCAAGAAGCTGCAGAGGTAGATCAAGAGCTCGTTGAACTACTAGTGAAAGAAACGAGATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389900.8
CDS CCA 72 bp AATGTTTTCCAAATTGGGCTCTTGAGATTCTTGCATTaGAAAGGCTGGACCTGGCTCTTCATCATCACTTGC +
Preference number: 6 (lower is better)
Translates to: NVFQIGLLRFLH*KGWTWLFIITC
Trigger: GCAAGTGATGATGAAGAGCCAGGTCCAGCCTTTCCAATGCAAGAATCTCAAGAGCCCAATTTGGAAAACATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389900.8
ENST00000389902.8
ENST00000425013.6
CDS CAA 72 bp TCGATAATCAGAGAACACCAGCAGCCAGTGAGGACCTaGATTATGTCGTTCAATAGGATAACACACCGTTCT +
Preference number: 6 (lower is better)
Translates to: SIIREHQQPVRT*IMSFNRITHRS
Trigger: AGAACGGTGTGTTATCCTATTGAACGACATAATCAAGGTCCTCACTGGCTGCTGGTGTTCTCTGATTATCGA
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469375.1
CDS CAA 72 bp TTCAAAAGAACAGATAGCTGTATAATGATAATGTCCTaGGGTCCTGTTCCAGAGGCTAGGGGGAGGAGAAGA +
Preference number: 6 (lower is better)
Translates to: FKRTDSCIMIMS*GPVPEARGRRR
Trigger: TCTTCTCCTCCCCCTAGCCTCTGGAACAGGACCCAAGGACATTATCATTATACAGCTATCTGTTCTTTTGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000476345.1
CDS CCA 72 bp TTGTATTTCCAATGCCTAGCACAGTTGTTGAACGAGTaGCTCCAAAAACTTCTTCCTCTGTCAAAGACTGGA +
Preference number: 6 (lower is better)
Translates to: LYFQCLAQLLNE*LQKLLPLSKTG
Trigger: TCCAGTCTTTGACAGAGGAAGAAGTTTTTGGAGCCACTCGTTCAACAACTGTGCTAGGCATTGGAAATACAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000416985.5
CDS GCA 72 bp TACTTTAAGCCTCAACAGATGCTGACTAAATGTGGCTaGTGTTTTAGATGTCATCTCTCACCAGAACAAACA +
Preference number: 6 (lower is better)
Translates to: YFKPQQMLTKCG*CFRCHLSPEQT
Trigger: TGTTTGTTCTGGTGAGAGATGACATCTAAAACAGCAGCCACATTTAGTCAGCATCTGTTGAGGCTTAAAGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469375.1