RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RNF215 (Homo sapiens)

Ensembl gene IDs: ENSG00000099999

Ensembl transcript IDs: ENST00000215798.10, ENST00000332468.5, ENST00000382363.8, ENST00000421022.1, ENST00000431544.2, ENST00000463319.1, ENST00000473077.1, ENST00000619645.1, ENST00000630264.1, ENST00000631046.2

Found 795 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GAGCTCCTCCCATGGCCGCAGGCGGCCCCTCTGCAGGCGATGGGCTaGCTCCACTCCACGGGGCACACTGGGCATGAAGGCCGCCGGCCA +
Preference number: 1 (lower is better)
Translates to: ELLPWPQAAPLQAMG*LHSTGHTGHEGRRP
Trigger: TGGCCGGCGGCCTTCATGCCCAGTGTGCCCCGTGGAGTGGAGGCAGCCCATCGCCTGCAGAGGGGCCGCCTGCGGCCATGGGAGGAGCTC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332468.5
3UTR CCA 90 bp GCTGCGGGGCCCTGCATGTCCGTGGGGCTCACGGTGCGGCGCTTCTaGGACAGCCTGCTGAGGCTGGGCACGCTCCACCAGCAGCCACTC +
Preference number: 1 (lower is better)
Translates to: AAGPCMSVGLTVRRF*DSLLRLGTLHQQPL
Trigger: GAGTGGCTGCTGGTGGAGCGTGCCCAGCCTCAGCAGGCTGTCCCAGAAGCGCCGCACCGTGAGCCCCACGGACATGCAGGGCCCCGCAGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332468.5
3UTR TCA 90 bp TCTGCAGGCGATGGGCTGCCTCCACTCCACGGGGCACACTGGGCATaGAGGCCGCCGGCCAGGTCCATGGGACCCTCTGAAGGGCCTCTC +
Preference number: 1 (lower is better)
Translates to: SAGDGLPPLHGAHWA*RPPARSMGPSEGPL
Trigger: GAGAGGCCCTTCAGAGGGTCCCATGGACCTGGCCGGCGGCCTTCATGCCCAGTGTGCCCCGTGGAGTGGAGGCAGCCCATCGCCTGCAGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332468.5
3UTR TCA 90 bp CGGCTGCCACCGTGGGCCGCTGGGCAGCAGAGCAGAGGAAAGACCTaGCGCGCCTCAGTAAGCATGTGGAGGCCCTCAGGGCCCAGCTGG +
Preference number: 1 (lower is better)
Translates to: RLPPWAAGQQSRGKT*RASVSMWRPSGPSW
Trigger: CCAGCTGGGCCCTGAGGGCCTCCACATGCTTACTGAGGCGCGTCAGGTCTTTCCTCTGCTCTGCTGCCCAGCGGCCCACGGTGGCAGCCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332468.5
3UTR CCA 90 bp GGCTGGAGGGCGCTGGCCAGCAGGTCTGCTGGGCCAGCACGGAGCTaGATAAGGAGAAGGCCCGTGTCGACAGCATGGTCCGCCACCAGG +
Preference number: 1 (lower is better)
Translates to: GWRALASRSAGPARS*IRRRPVSTAWSATR
Trigger: CCTGGTGGCGGACCATGCTGTCGACACGGGCCTTCTCCTTATCCAGCTCCGTGCTGGCCCAGCAGACCTGCTGGCCAGCGCCCTCCAGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332468.5
3UTR CCA 90 bp CAGACCTGCACAGGCCCACCGAGACCCAGATCCATGGTAGGGGACTaGGGATGGTGCCAAGGGCATGCTGGGGCTCAGGGCCAGCAGCTG +
Preference number: 1 (lower is better)
Translates to: QTCTGPPRPRSMVGD*GWCQGHAGAQGQQL
Trigger: CAGCTGCTGGCCCTGAGCCCCAGCATGCCCTTGGCACCATCCCCAGTCCCCTACCATGGATCTGGGTCTCGGTGGGCCTGTGCAGGTCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332468.5
3UTR GCA 90 bp CTGTCTGAGTGGGAGCACGACAAACAGCAGCTGCTCACAGGTCTGTaGCCCAGAGGCCAGACGCCTGGTGCCCAGGGGCTCTGCCACAGC +
Preference number: 1 (lower is better)
Translates to: LSEWEHDKQQLLTGL*PRGQTPGAQGLCHS
Trigger: GCTGTGGCAGAGCCCCTGGGCACCAGGCGTCTGGCCTCTGGGGCACAGACCTGTGAGCAGCTGCTGTTTGTCGTGCTCCCACTCAGACAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332468.5
3UTR CCA 90 bp CCCCAGAGCCAGCCATCTGCGTTCCAAGGGCCGGGGTCTTCAAGCTaGGATCCTGGCCTTGACCAGGTCCGGTGTGCATCTGCCTGCTGC +
Preference number: 1 (lower is better)
Translates to: PQSQPSAFQGPGSSS*DPGLDQVRCASACC
Trigger: GCAGCAGGCAGATGCACACCGGACCTGGTCAAGGCCAGGATCCCAGCTTGAAGACCCCGGCCCTTGGAACGCAGATGGCTGGCTCTGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332468.5
3UTR TCA 90 bp ATCTGCGTTCCAAGGGCCGGGGTCTTCAAGCTGGGATCCTGGCCTTaGCCAGGTCCGGTGTGCATCTGCCTGCTGCCAGCTTCCCCCGAC +
Preference number: 1 (lower is better)
Translates to: ICVPRAGVFKLGSWP*PGPVCICLLPASPD
Trigger: GTCGGGGGAAGCTGGCAGCAGGCAGATGCACACCGGACCTGGTCAAGGCCAGGATCCCAGCTTGAAGACCCCGGCCCTTGGAACGCAGAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000332468.5
3UTR TCA 90 bp GGCAGGGAAGGGAGGGCAGCAAGGAAGGGGGTGTTCATCCGGTGGTaGCACTGTGATCTCAGTCCCACTGGGGCCACCAGGAGCTGGGCT +
Preference number: 1 (lower is better)
Translates to: GREGRAARKGVFIRW*HCDLSPTGATRSWA
Trigger: AGCCCAGCTCCTGGTGGCCCCAGTGGGACTGAGATCACAGTGTCACCACCGGATGAACACCCCCTTCCTTGCTGCCCTCCCTTCCCTGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000332468.5
3UTR GCA 90 bp CCGCCACCAGGAGGTGAGGCCAGGGCCCTCGCTAGCCTGGGCATCTaGAATGTAGGCTGCAGGGAAAGAGGGCTCCACTGTCAGGGAATG +
Preference number: 1 (lower is better)
Translates to: PPPGGEARALASLGI*NVGCRERGLHCQGM
Trigger: CATTCCCTGACAGTGGAGCCCTCTTTCCCTGCAGCCTACATTGCAGATGCCCAGGCTAGCGAGGGCCCTGGCCTCACCTCCTGGTGGCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332468.5
3UTR GCA 90 bp GTAAGCCAGGTCCTCTCACGGCTCCTAGAGGCCGTCCACCTTCCTTaGCATGGGGCTCCCTCCATCGGGGTGCAGGCAGGAAGGGTCCAT +
Preference number: 1 (lower is better)
Translates to: VSQVLSRLLEAVHLP*HGAPSIGVQAGRVH
Trigger: ATGGACCCTTCCTGCCTGCACCCCGATGGAGGGAGCCCCATGGCAAGGAAGGTGGACGGCCTCTAGGAGCCGTGAGAGGACCTGGCTTAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000631046.2
3UTR CCA 90 bp GCTCCAATCAATGCTGTCCAAAATCCGGGAAGTGGCCCAGCAGGGTaGCCTCAAGGTGGGCCTGAGAGGGCGGGCCCTTGGGGACCAGGA +
Preference number: 1 (lower is better)
Translates to: APINAVQNPGSGPAG*PQGGPERAGPWGPG
Trigger: TCCTGGTCCCCAAGGGCCCGCCCTCTCAGGCCCACCTTGAGGCCACCCTGCTGGGCCACTTCCCGGATTTTGGACAGCATTGATTGGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332468.5
3UTR GCA 90 bp GGCGGCCAGCAGCGCAGCCCCTGTGGACCCACCACAGCACGCAAGTaGTTCATGCGTCATCCACTCTGCATAGACAGGGACGTGAAAGCC +
Preference number: 1 (lower is better)
Translates to: GGQQRSPCGPTTARK*FMRHPLCIDRDVKA
Trigger: GGCTTTCACGTCCCTGTCTATGCAGAGTGGATGACGCATGAAGCACTTGCGTGCTGTGGTGGGTCCACAGGGGCTGCGCTGCTGGCCGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332468.5
3UTR GCA 90 bp AGGATGAGCAGTGCCTGTCTGAGTGGGAGCACGACAAACAGCAGCTaGTCACAGGTCTGTGCCCCAGAGGCCAGACGCCTGGTGCCCAGG +
Preference number: 1 (lower is better)
Translates to: RMSSACLSGSTTNSS*SQVCAPEARRLVPR
Trigger: CCTGGGCACCAGGCGTCTGGCCTCTGGGGCACAGACCTGTGAGCAGCTGCTGTTTGTCGTGCTCCCACTCAGACAGGCACTGCTCATCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332468.5
3UTR GCA 90 bp AGAACACCAGGAGTGTCCACTCCCAGACCATTGAGACGGCCCTGGTaGCCTGTGACGCATGCGCCAGCGTCCAGGGAAGCCTGCAGAAGG +
Preference number: 1 (lower is better)
Translates to: RTPGVSTPRPLRRPW*PVTHAPASREACRR
Trigger: CCTTCTGCAGGCTTCCCTGGACGCTGGCGCATGCGTCACAGGGCACCAGGGCCGTCTCAATGGTCTGGGAGTGGACACTCCTGGTGTTCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332468.5
3UTR CCA 90 bp CCTCAGTCTGAAGCTGTGGGGCCCTCCTTCCCAGTGTGGACATGGTaGGGCCCTCATCCTTCCTCCCACCCACTGGGCTTGCTGTCCTGT +
Preference number: 1 (lower is better)
Translates to: PQSEAVGPSFPVWTW*GPHPSSHPLGLLSC
Trigger: ACAGGACAGCAAGCCCAGTGGGTGGGAGGAAGGATGAGGGCCCCACCATGTCCACACTGGGAAGGAGGGCCCCACAGCTTCAGACTGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215798.10
ENST00000382363.8
3UTR CCA 90 bp GATCCTCAGTCTGAAGCTGTGGGGCCCTCCTTCCCAGTGTGGACATaGTGGGGCCCTCATCCTTCCTCCCACCCACTGGGCTTGCTGTCC +
Preference number: 1 (lower is better)
Translates to: DPQSEAVGPSFPVWT*WGPHPSSHPLGLLS
Trigger: GGACAGCAAGCCCAGTGGGTGGGAGGAAGGATGAGGGCCCCACCATGTCCACACTGGGAAGGAGGGCCCCACAGCTTCAGACTGAGGATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000215798.10
ENST00000382363.8
3UTR CCA 90 bp GCCCTAGATCCTCAGTCTGAAGCTGTGGGGCCCTCCTTCCCAGTGTaGACATGGTGGGGCCCTCATCCTTCCTCCCACCCACTGGGCTTG +
Preference number: 1 (lower is better)
Translates to: ALDPQSEAVGPSFPV*TWWGPHPSSHPLGL
Trigger: CAAGCCCAGTGGGTGGGAGGAAGGATGAGGGCCCCACCATGTCCACACTGGGAAGGAGGGCCCCACAGCTTCAGACTGAGGATCTAGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000215798.10
ENST00000382363.8
3UTR CCA 90 bp ATTCCGATCCTTGCGGCTGTGGGACTGAGGTCCCCATGTCCTCGCTaGCTGGCTGTAAGCCAGGTCCTCTCACGGCTCCTAGAGGCCGTC +
Preference number: 1 (lower is better)
Translates to: IPILAAVGLRSPCPR*LAVSQVLSRLLEAV
Trigger: GACGGCCTCTAGGAGCCGTGAGAGGACCTGGCTTACAGCCAGCCAGCGAGGACATGGGGACCTCAGTCCCACAGCCGCAAGGATCGGAAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332468.5
ENST00000630264.1
ENST00000631046.2
3UTR CCA 90 bp CACTCCACGGGGCACACTGGGCATGAAGGCCGCCGGCCAGGTCCATaGGACCCTCTGAAGGGCCTCTCTCTTGGCTGCCATAGAAACAAG +
Preference number: 1 (lower is better)
Translates to: HSTGHTGHEGRRPGP*DPLKGLSLGCHRNK
Trigger: CTTGTTTCTATGGCAGCCAAGAGAGAGGCCCTTCAGAGGGTCCCATGGACCTGGCCGGCGGCCTTCATGCCCAGTGTGCCCCGTGGAGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332468.5
3UTR GCA 90 bp TCCGCATCCGGGTCCTACAGGAGGAGAACGGGCGGCTCCAATCAATaGTGTCCAAAATCCGGGAAGTGGCCCAGCAGGGTGGCCTCAAGG +
Preference number: 1 (lower is better)
Translates to: SASGSYRRRTGGSNQ*CPKSGKWPSRVASR
Trigger: CCTTGAGGCCACCCTGCTGGGCCACTTCCCGGATTTTGGACAGCATTGATTGGAGCCGCCCGTTCTCCTCCTGTAGGACCCGGATGCGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332468.5
3UTR GCA 90 bp GGAGGCCTGGTGCACTACACAGCTCCTTTGTGCCTCCAGGCCACCTaGCCAAGCTGGTGTGCCTCCCTTCTAAGGTCCTGTCCCATTGGG +
Preference number: 1 (lower is better)
Translates to: GGLVHYTAPLCLQAT*PSWCASLLRSCPIG
Trigger: CCCAATGGGACAGGACCTTAGAAGGGAGGCACACCAGCTTGGGCAGGTGGCCTGGAGGCACAAAGGAGCTGTGTAGTGCACCAGGCCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332468.5
3UTR CCA 90 bp TGCAGCAAGGGTGTTAAAGCCAGGCGGCCAGCAGCGCAGCCCCTGTaGACCCACCACAGCACGCAAGTGCTTCATGCGTCATCCACTCTG +
Preference number: 1 (lower is better)
Translates to: CSKGVKARRPAAQPL*THHSTQVLHASSTL
Trigger: CAGAGTGGATGACGCATGAAGCACTTGCGTGCTGTGGTGGGTCCACAGGGGCTGCGCTGCTGGCCGCCTGGCTTTAACACCCTTGCTGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332468.5
3UTR CCA 90 bp TCAAGAACACCAGGAGTGTCCACTCCCAGACCATTGAGACGGCCCTaGTGCCCTGTGACGCATGCGCCAGCGTCCAGGGAAGCCTGCAGA +
Preference number: 1 (lower is better)
Translates to: SRTPGVSTPRPLRRP*CPVTHAPASREACR
Trigger: TCTGCAGGCTTCCCTGGACGCTGGCGCATGCGTCACAGGGCACCAGGGCCGTCTCAATGGTCTGGGAGTGGACACTCCTGGTGTTCTTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332468.5
3UTR TCA 90 bp TGCCCAGTGAGGCCTCACTCTGGAAGAGCGCCCCACAGGCAAAGATaGGCAGGTGTGCCACACTCTCCTGCCAGATGGCTAAGGGGTGCA +
Preference number: 1 (lower is better)
Translates to: CPVRPHSGRAPHRQR*AGVPHSPARWLRGA
Trigger: TGCACCCCTTAGCCATCTGGCAGGAGAGTGTGGCACACCTGCTCATCTTTGCCTGTGGGGCGCTCTTCCAGAGTGAGGCCTCACTGGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332468.5
3UTR TCA 90 bp ACCAGGCACTGGGGGAACAGTGACCCAGGGACTGATACTGCCCAGTaGGGCCTCACTCTGGAAGAGCGCCCCACAGGCAAAGATGAGCAG +
Preference number: 1 (lower is better)
Translates to: TRHWGNSDPGTDTAQ*GLTLEERPTGKDEQ
Trigger: CTGCTCATCTTTGCCTGTGGGGCGCTCTTCCAGAGTGAGGCCTCACTGGGCAGTATCAGTCCCTGGGTCACTGTTCCCCCAGTGCCTGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000332468.5
3UTR GCA 90 bp AGAGGCCGTCCACCTTCCTTGCCATGGGGCTCCCTCCATTGGGCTTaGTGTCCTGTCTATCCTGCTGTCCCATCCTGTCCTGTCCTGGGA +
Preference number: 1 (lower is better)
Translates to: RGRPPSLPWGSLHWA*CPVYPAVPSCPVLG
Trigger: TCCCAGGACAGGACAGGATGGGACAGCAGGATAGACAGGACAGCAAGCCCAATGGAGGGAGCCCCATGGCAAGGAAGGTGGACGGCCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332468.5
ENST00000630264.1
3UTR GCA 90 bp GGTGAGGCCAGGGCCCTCGCTAGCCTGGGCATCTGCAATGTAGGCTaGAGGGAAAGAGGGCTCCACTGTCAGGGAATGGGGGATCATCTA +
Preference number: 1 (lower is better)
Translates to: GEARALASLGICNVG*RERGLHCQGMGDHL
Trigger: TAGATGATCCCCCATTCCCTGACAGTGGAGCCCTCTTTCCCTGCAGCCTACATTGCAGATGCCCAGGCTAGCGAGGGCCCTGGCCTCACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000332468.5
3UTR GCA 90 bp CCCAGAGGCCAGACGCCTGGTGCCCAGGGGCTCTGCCACAGCCTTTaGATGGATGTTTGTGAGACAGGGCTTCCAGGGCAAGTGGTTTGT +
Preference number: 1 (lower is better)
Translates to: PRGQTPGAQGLCHSL*MDVCETGLPGQVVC
Trigger: ACAAACCACTTGCCCTGGAAGCCCTGTCTCACAAACATCCATGCAAAGGCTGTGGCAGAGCCCCTGGGCACCAGGCGTCTGGCCTCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332468.5
3UTR CCA 90 bp GCTCCTAGAGGCCGTCCACCTTCCTTGCCATGGGGCTCCCTCCATTaGGCTTGCTGTCCTGTCTATCCTGCTGTCCCATCCTGTCCTGTC +
Preference number: 1 (lower is better)
Translates to: APRGRPPSLPWGSLH*ACCPVYPAVPSCPV
Trigger: GACAGGACAGGATGGGACAGCAGGATAGACAGGACAGCAAGCCCAATGGAGGGAGCCCCATGGCAAGGAAGGTGGACGGCCTCTAGGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332468.5
ENST00000630264.1
3UTR CCA 90 bp GTGCACTACACAGCTCCTTTGTGCCTCCAGGCCACCTGCCCAAGCTaGTGTGCCTCCCTTCTAAGGTCCTGTCCCATTGGGCACAGGAGG +
Preference number: 1 (lower is better)
Translates to: VHYTAPLCLQATCPS*CASLLRSCPIGHRR
Trigger: CCTCCTGTGCCCAATGGGACAGGACCTTAGAAGGGAGGCACACCAGCTTGGGCAGGTGGCCTGGAGGCACAAAGGAGCTGTGTAGTGCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332468.5
3UTR CCA 90 bp GAGGCCAGACGCCTGGTGCCCAGGGGCTCTGCCACAGCCTTTGCATaGATGTTTGTGAGACAGGGCTTCCAGGGCAAGTGGTTTGTGTGG +
Preference number: 1 (lower is better)
Translates to: EARRLVPRGSATAFA*MFVRQGFQGKWFVW
Trigger: CCACACAAACCACTTGCCCTGGAAGCCCTGTCTCACAAACATCCATGCAAAGGCTGTGGCAGAGCCCCTGGGCACCAGGCGTCTGGCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332468.5
3UTR TCA 90 bp CAGCCTGGCGGAATTCCTGCCGTTCCCAAGCTTGAGCTGGCCGTGTaGCCTTGGACAGCTCACTTTGGCTGTAGCCTGTCCAAAACGGGG +
Preference number: 1 (lower is better)
Translates to: QPGGIPAVPKLELAV*PWTAHFGCSLSKTG
Trigger: CCCCGTTTTGGACAGGCTACAGCCAAAGTGAGCTGTCCAAGGTCACACGGCCAGCTCAAGCTTGGGAACGGCAGGAATTCCGCCAGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332468.5
3UTR TCA 90 bp GGCACACTGGGCATGAAGGCCGCCGGCCAGGTCCATGGGACCCTCTaGAGGGCCTCTCTCTTGGCTGCCATAGAAACAAGTGACCTAAAG +
Preference number: 1 (lower is better)
Translates to: GTLGMKAAGQVHGTL*RASLLAAIETSDLK
Trigger: CTTTAGGTCACTTGTTTCTATGGCAGCCAAGAGAGAGGCCCTTCAGAGGGTCCCATGGACCTGGCCGGCGGCCTTCATGCCCAGTGTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332468.5
3UTR GCA 90 bp CTACACAGCTCCTTTGTGCCTCCAGGCCACCTGCCCAAGCTGGTGTaGCTCCCTTCTAAGGTCCTGTCCCATTGGGCACAGGAGGCAGAT +
Preference number: 1 (lower is better)
Translates to: LHSSFVPPGHLPKLV*LPSKVLSHWAQEAD
Trigger: ATCTGCCTCCTGTGCCCAATGGGACAGGACCTTAGAAGGGAGGCACACCAGCTTGGGCAGGTGGCCTGGAGGCACAAAGGAGCTGTGTAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332468.5
3UTR GCA 90 bp CCCAAACCACACCATGGGACTAGTCCCAAGGACACAGCCTCCAGCTaGCCACTGTCCTGGACCCCATGGCATAGGAGTGCTAGGTACCCA +
Preference number: 1 (lower is better)
Translates to: PKPHHGTSPKDTASS*PLSWTPWHRSARYP
Trigger: TGGGTACCTAGCACTCCTATGCCATGGGGTCCAGGACAGTGGGCAGCTGGAGGCTGTGTCCTTGGGACTAGTCCCATGGTGTGGTTTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332468.5
3UTR GCA 90 bp CCCAGACCTGCCAAGAGCCAGAGAGCATCCCTGTCAGAGCCTCCCTaGAGTTCCCAGCCACGACCTTCAAGAACACCAGGAGTGTCCACT +
Preference number: 1 (lower is better)
Translates to: PRPAKSQRASLSEPP*SSQPRPSRTPGVST
Trigger: AGTGGACACTCCTGGTGTTCTTGAAGGTCGTGGCTGGGAACTGCAGGGAGGCTCTGACAGGGATGCTCTCTGGCTCTTGGCAGGTCTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332468.5
3UTR CCA 90 bp GGGAAGAGCAGCCTGGCGGAATTCCTGCCGTTCCCAAGCTTGAGCTaGCCGTGTGACCTTGGACAGCTCACTTTGGCTGTAGCCTGTCCA +
Preference number: 1 (lower is better)
Translates to: GKSSLAEFLPFPSLS*PCDLGQLTLAVACP
Trigger: TGGACAGGCTACAGCCAAAGTGAGCTGTCCAAGGTCACACGGCCAGCTCAAGCTTGGGAACGGCAGGAATTCCGCCAGGCTGCTCTTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332468.5
3UTR CCA 90 bp GGAACAGTGACCCAGGGACTGATACTGCCCAGTGAGGCCTCACTCTaGAAGAGCGCCCCACAGGCAAAGATGAGCAGGTGTGCCACACTC +
Preference number: 1 (lower is better)
Translates to: GTVTQGLILPSEASL*KSAPQAKMSRCATL
Trigger: GAGTGTGGCACACCTGCTCATCTTTGCCTGTGGGGCGCTCTTCCAGAGTGAGGCCTCACTGGGCAGTATCAGTCCCTGGGTCACTGTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332468.5
3UTR CCA 90 bp AGCTCTGGCTTCCTAGCCTACCACTATGTGCACCACAGCCTTTACTaGCTCCCACCGCCCTCCCAATCAAGCCCCACACAGTGTGGCGGT +
Preference number: 1 (lower is better)
Translates to: SSGFLAYHYVHHSLY*LPPPSQSSPTQCGG
Trigger: ACCGCCACACTGTGTGGGGCTTGATTGGGAGGGCGGTGGGAGCCAGTAAAGGCTGTGGTGCACATAGTGGTAGGCTAGGAAGCCAGAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332468.5
3UTR CCA 90 bp GCTCCTGCTGCTGCTTCAAAGCTGTATGAGCTACTTGGAGAACCTTaGCTCAGAGCAGATGATGCCCCCTGCACAGGCTGCGGGGCCCTG +
Preference number: 1 (lower is better)
Translates to: APAAASKLYELLGEP*LRADDAPCTGCGAL
Trigger: CAGGGCCCCGCAGCCTGTGCAGGGGGCATCATCTGCTCTGAGCCAAGGTTCTCCAAGTAGCTCATACAGCTTTGAAGCAGCAGCAGGAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000332468.5
3UTR CCA 90 bp AGGATACAACTGAGGCAAGGCCAGGCCTGGCTTCACAGAGCTCCCTaGTCCAGTGGAGAAGAGCCAGGCAGAAGTGCCACCCAGGAGACA +
Preference number: 1 (lower is better)
Translates to: RIQLRQGQAWLHRAP*SSGEEPGRSATQET
Trigger: TGTCTCCTGGGTGGCACTTCTGCCTGGCTCTTCTCCACTGGACCAGGGAGCTCTGTGAAGCCAGGCCTGGCCTTGCCTCAGTTGTATCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332468.5
3UTR GCA 90 bp AAGTTAATCAAGCCCTCCTCCCCAGTGCTAGGCTTGCCCCAGACCTaGCAAGAGCCAGAGAGCATCCCTGTCAGAGCCTCCCTGCAGTTC +
Preference number: 1 (lower is better)
Translates to: KLIKPSSPVLGLPQT*QEPESIPVRASLQF
Trigger: GAACTGCAGGGAGGCTCTGACAGGGATGCTCTCTGGCTCTTGGCAGGTCTGGGGCAAGCCTAGCACTGGGGAGGAGGGCTTGATTAACTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332468.5
3UTR GCA 90 bp GTCCCACAGACTCTGGCAACGTCACAGATCACATGGAGAGGCAAGTaGAGTCCAACGACATCCGCATCCGGGTCCTACAGGAGGAGAACG +
Preference number: 1 (lower is better)
Translates to: VPQTLATSQITWRGK*SPTTSASGSYRRRT
Trigger: CGTTCTCCTCCTGTAGGACCCGGATGCGGATGTCGTTGGACTGCACTTGCCTCTCCATGTGATCTGTGACGTTGCCAGAGTCTGTGGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332468.5
3UTR GCA 90 bp AAGATGAGCAGGTGTGCCACACTCTCCTGCCAGATGGCTAAGGGGTaGAGGGAGGGATGGCCACATCTGCCATGGGAATCCAGAATGGCT +
Preference number: 1 (lower is better)
Translates to: KMSRCATLSCQMAKG*REGWPHLPWESRMA
Trigger: AGCCATTCTGGATTCCCATGGCAGATGTGGCCATCCCTCCCTGCACCCCTTAGCCATCTGGCAGGAGAGTGTGGCACACCTGCTCATCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332468.5
3UTR GCA 90 bp AAGCAGCTCACCCTGCAGAAGCCCCTGACTAGCCTCAGGAGACTGTaGACACTCCCTGCTCTGCCCTATCAATGTGTGTCTGTGGGCAAG +
Preference number: 1 (lower is better)
Translates to: KQLTLQKPLTSLRRL*TLPALPYQCVSVGK
Trigger: CTTGCCCACAGACACACATTGATAGGGCAGAGCAGGGAGTGTGCACAGTCTCCTGAGGCTAGTCAGGGGCTTCTGCAGGGTGAGCTGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332468.5
3UTR CCA 90 bp CCACTGTCCTGGACCCCATGGCATAGGAGTGCTAGGTACCCATCTTaGCACAGGATTGGATATCAGGTGACCTGGGTTCTCCCAGCCCCT +
Preference number: 1 (lower is better)
Translates to: PLSWTPWHRSARYPS*HRIGYQVTWVLPAP
Trigger: AGGGGCTGGGAGAACCCAGGTCACCTGATATCCAATCCTGTGCCAAGATGGGTACCTAGCACTCCTATGCCATGGGGTCCAGGACAGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332468.5
3UTR CCA 90 bp TGGCCCAGCAGAGCATATTCTGAGACTCTCCAAGCTCTTGATGCCTaGGCCAGTTCCCCAGAGCCAGAGCTGCGGTTGTATGGTCTGAGG +
Preference number: 1 (lower is better)
Translates to: WPSRAYSETLQALDA*ASSPEPELRLYGLR
Trigger: CCTCAGACCATACAACCGCAGCTCTGGCTCTGGGGAACTGGCCCAGGCATCAAGAGCTTGGAGAGTCTCAGAATATGCTCTGCTGGGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332468.5
3UTR TCA 90 bp AACCAGCCACAGGAGGGTGGGCCTGACCAACCACACTATTGGCGATaGCCAAACTGGGTTGCCACCTCCTACCGAGAAAGCGCCTTCTAT +
Preference number: 1 (lower is better)
Translates to: NQPQEGGPDQPHYWR*PNWVATSYRESAFY
Trigger: ATAGAAGGCGCTTTCTCGGTAGGAGGTGGCAACCCAGTTTGGTCATCGCCAATAGTGTGGTTGGTCAGGCCCACCCTCCTGTGGCTGGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332468.5
3UTR GCA 90 bp AAGAATTGGCTTCCAAGCTCCACTTGTTGGCAGAATTCCGATCCTTaGGGCTGTGGGACTGAGGTCCCCATGTCCTCGCTGGCTGGCTGT +
Preference number: 1 (lower is better)
Translates to: KNWLPSSTCWQNSDP*GCGTEVPMSSLAGC
Trigger: ACAGCCAGCCAGCGAGGACATGGGGACCTCAGTCCCACAGCCGCAAGGATCGGAATTCTGCCAACAAGTGGAGCTTGGAAGCCAATTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332468.5
ENST00000421022.1
ENST00000630264.1
ENST00000631046.2
3UTR CCA 90 bp AGTCCCAAGGACACAGCCTCCAGCTGCCCACTGTCCTGGACCCCATaGCATAGGAGTGCTAGGTACCCATCTTGGCACAGGATTGGATAT +
Preference number: 1 (lower is better)
Translates to: SPKDTASSCPLSWTP*HRSARYPSWHRIGY
Trigger: ATATCCAATCCTGTGCCAAGATGGGTACCTAGCACTCCTATGCCATGGGGTCCAGGACAGTGGGCAGCTGGAGGCTGTGTCCTTGGGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332468.5
3UTR TCA 90 bp ATAGGAGTGCTAGGTACCCATCTTGGCACAGGATTGGATATCAGGTaGCCTGGGTTCTCCCAGCCCCTCCAGACCCCTAAAGCACTAGGG +
Preference number: 1 (lower is better)
Translates to: IGVLGTHLGTGLDIR*PGFSQPLQTPKALG
Trigger: CCCTAGTGCTTTAGGGGTCTGGAGGGGCTGGGAGAACCCAGGTCACCTGATATCCAATCCTGTGCCAAGATGGGTACCTAGCACTCCTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332468.5
3UTR GCA 90 bp AGGACCTCACAGCTGAGTAGCTCTCTCAGGCGCCCACCAACTCCGTaGCATGTATTCATTAGCTCCCAGTTCTGGCAGTCAGAAGTCCAG +
Preference number: 1 (lower is better)
Translates to: RTSQLSSSLRRPPTP*HVFISSQFWQSEVQ
Trigger: CTGGACTTCTGACTGCCAGAACTGGGAGCTAATGAATACATGGCACGGAGTTGGTGGGCGCCTGAGAGAGCTACTCAGCTGTGAGGTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332468.5
3UTR GCA 90 bp CAGGGTAGGGGAAGCCTTTCTACCCCAAGTGGGTGCTGTTCTCTGTaGCTTGCAAACTGTCACAGCCGCCATGTATCAGGTGTCTGCTGT +
Preference number: 1 (lower is better)
Translates to: QGRGSLSTPSGCCSL*LANCHSRHVSGVCC
Trigger: ACAGCAGACACCTGATACATGGCGGCTGTGACAGTTTGCAAGGCACAGAGAACAGCACCCACTTGGGGTAGAAAGGCTTCCCCTACCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332468.5
3UTR GCA 90 bp AGGGCTCCACTGTCAGGGAATGGGGGATCATCTATATTGGGCATCTaGTCCCTGAGATGCCTCCAGGTGTGGGGGTTGACTCACCTTTAC +
Preference number: 1 (lower is better)
Translates to: RAPLSGNGGSSILGI*SLRCLQVWGLTHLY
Trigger: GTAAAGGTGAGTCAACCCCCACACCTGGAGGCATCTCAGGGAGCAGATGCCCAATATAGATGATCCCCCATTCCCTGACAGTGGAGCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000332468.5
3UTR CCA 90 bp ACAGCCTTTGCATGGATGTTTGTGAGACAGGGCTTCCAGGGCAAGTaGTTTGTGTGGAAGAACCCAGGCTGGGACACAGGCAAGAGGCAG +
Preference number: 1 (lower is better)
Translates to: TAFAWMFVRQGFQGK*FVWKNPGWDTGKRQ
Trigger: CTGCCTCTTGCCTGTGTCCCAGCCTGGGTTCTTCCACACAAACCACTTGCCCTGGAAGCCCTGTCTCACAAACATCCATGCAAAGGCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332468.5
3UTR CCA 90 bp GCAAGCTCTTCCCCTCTCTGGGTCTCAGCTCTGTCATCTATCAAGTaGAGGCTCCGGGCCACTGGATATAAGGCAGCCATTCACCCAGAA +
Preference number: 1 (lower is better)
Translates to: ASSSPLWVSALSSIK*RLRATGYKAAIHPE
Trigger: TTCTGGGTGAATGGCTGCCTTATATCCAGTGGCCCGGAGCCTCCACTTGATAGATGACAGAGCTGAGACCCAGAGAGGGGAAGAGCTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332468.5
3UTR CCA 90 bp CTGGCGACAGCTACACTGGCCCCATATTCTCTTTCCTTATTGACCTaGGAGCTGCCTGTAAGGAGGGCAGACTCACGTCACAGGATTGCA +
Preference number: 1 (lower is better)
Translates to: LATATLAPYSLSLLT*ELPVRRADSRHRIA
Trigger: TGCAATCCTGTGACGTGAGTCTGCCCTCCTTACAGGCAGCTCCCAGGTCAATAAGGAAAGAGAATATGGGGCCAGTGTAGCTGTCGCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215798.10
ENST00000382363.8
3UTR CCA 90 bp GCATCTACCAGGTTGCGTTCCTTTCTGCCGGTTCTGGGGAAGAATTaGCTTCCAAGCTCCACTTGTTGGCAGAATTCCGATCCTTGCGGC +
Preference number: 1 (lower is better)
Translates to: ASTRLRSFLPVLGKN*LPSSTCWQNSDPCG
Trigger: GCCGCAAGGATCGGAATTCTGCCAACAAGTGGAGCTTGGAAGCCAATTCTTCCCCAGAACCGGCAGAAAGGAACGCAACCTGGTAGATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332468.5
ENST00000421022.1
ENST00000630264.1
ENST00000631046.2
3UTR CCA 90 bp CAGATCCAGCAGCGTGGAATCCCAGATAACATGTCCCACAGACTCTaGCAACGTCACAGATCACATGGAGAGGCAAGTGCAGTCCAACGA +
Preference number: 1 (lower is better)
Translates to: QIQQRGIPDNMSHRL*QRHRSHGEASAVQR
Trigger: TCGTTGGACTGCACTTGCCTCTCCATGTGATCTGTGACGTTGCCAGAGTCTGTGGGACATGTTATCTGGGATTCCACGCTGCTGGATCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332468.5
3UTR CCA 90 bp AATTCTTGCTCGACTTCTGTGTGTCCCCCTTCTTGGTTCTTGGAATaGGTCCCCAAACCACACCATGGGACTAGTCCCAAGGACACAGCC +
Preference number: 1 (lower is better)
Translates to: NSCSTSVCPPSWFLE*VPKPHHGTSPKDTA
Trigger: GGCTGTGTCCTTGGGACTAGTCCCATGGTGTGGTTTGGGGACCCATTCCAAGAACCAAGAAGGGGGACACACAGAAGTCGAGCAAGAATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000332468.5
3UTR CCA 90 bp GTTGTGGCAAAAGCCATTAGAGACAAAGTTCCTGGCACCAGAAGATaGCCAGTGCCCACTGATGGGAGGCCTGAGGGATTTGCCCTTTCT +
Preference number: 1 (lower is better)
Translates to: VVAKAIRDKVPGTRR*PVPTDGRPEGFALS
Trigger: AGAAAGGGCAAATCCCTCAGGCCTCCCATCAGTGGGCACTGGCCATCTTCTGGTGCCAGGAACTTTGTCTCTAATGGCTTTTGCCACAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332468.5
3UTR TCA 90 bp AATCCTTTTGCAGAGCTGGCAGGAAGATGTGCAGTTAGCTGCTCGTaGGACATCATCCAGGCCCTTCTGTCCCCTTCTCAACCACCTTGT +
Preference number: 1 (lower is better)
Translates to: NPFAELAGRCAVSCS*DIIQALLSPSQPPC
Trigger: ACAAGGTGGTTGAGAAGGGGACAGAAGGGCCTGGATGATGTCTCACGAGCAGCTAACTGCACATCTTCCTGCCAGCTCTGCAAAAGGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332468.5
3UTR TCA 90 bp TCATCCACTCTGCATAGACAGGGACGTGAAAGCCCAACAGTGATGTaGCTGCCTCTAGTCACAACAGCCAAACGCAGACACAGGTCTGGT +
Preference number: 1 (lower is better)
Translates to: SSTLHRQGRESPTVM*LPLVTTAKRRHRSG
Trigger: ACCAGACCTGTGTCTGCGTTTGGCTGTTGTGACTAGAGGCAGTCACATCACTGTTGGGCTTTCACGTCCCTGTCTATGCAGAGTGGATGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332468.5
3UTR CCA 90 bp GAGAGTTATTCCCCTGGCACTTCCAGCCAAGCAGAGCAGCCTCTCTaGTTGTGGCAAAAGCCATTAGAGACAAAGTTCCTGGCACCAGAA +
Preference number: 1 (lower is better)
Translates to: ESYSPGTSSQAEQPL*LWQKPLETKFLAPE
Trigger: TTCTGGTGCCAGGAACTTTGTCTCTAATGGCTTTTGCCACAACCAGAGAGGCTGCTCTGCTTGGCTGGAAGTGCCAGGGGAATAACTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332468.5
3UTR TCA 90 bp TGGGACCCTCTGAAGGGCCTCTCTCTTGGCTGCCATAGAAACAAGTaGCCTAAAGACAAAGATGGCCACCCTGGAGAGAGAACTGAAACA +
Preference number: 1 (lower is better)
Translates to: WDPLKGLSLGCHRNK*PKDKDGHPGERTET
Trigger: TGTTTCAGTTCTCTCTCCAGGGTGGCCATCTTTGTCTTTAGGTCACTTGTTTCTATGGCAGCCAAGAGAGAGGCCCTTCAGAGGGTCCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332468.5
3UTR TCA 90 bp TCAGTGAGGGAACCGAGGTATGTATCCACTTGCACTGTCAGTCATTaGGGGCTACTTCCAGAGAGTTATTCCCCTGGCACTTCCAGCCAA +
Preference number: 1 (lower is better)
Translates to: SVREPRYVSTCTVSH*GLLPESYSPGTSSQ
Trigger: TTGGCTGGAAGTGCCAGGGGAATAACTCTCTGGAAGTAGCCCTCAATGACTGACAGTGCAAGTGGATACATACCTCGGTTCCCTCACTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332468.5
3UTR GCA 90 bp TTGTCCCCACAGCCTGTGCTCTTCACTACGTCACATGCTAATTCTTaGTCGACTTCTGTGTGTCCCCCTTCTTGGTTCTTGGAATGGGTC +
Preference number: 1 (lower is better)
Translates to: LSPQPVLFTTSHANS*STSVCPPSWFLEWV
Trigger: GACCCATTCCAAGAACCAAGAAGGGGGACACACAGAAGTCGAGCAAGAATTAGCATGTGACGTAGTGAAGAGCACAGGCTGTGGGGACAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000332468.5
3UTR GCA 90 bp ACAACAGCCAAACGCAGACACAGGTCTGGTTGTCCCCACAGCCTGTaGTCTTCACTACGTCACATGCTAATTCTTGCTCGACTTCTGTGT +
Preference number: 1 (lower is better)
Translates to: TTAKRRHRSGCPHSL*SSLRHMLILARLLC
Trigger: ACACAGAAGTCGAGCAAGAATTAGCATGTGACGTAGTGAAGAGCACAGGCTGTGGGGACAACCAGACCTGTGTCTGCGTTTGGCTGTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332468.5
3UTR TCA 90 bp ATAATGGGACCCCGTTTCTGTGAAGGACAATCTCCAAAAACTTGCTaGGGCCTTCTCAGGGCGCACGCTCCCAAATGCCTGAAGCATTTT +
Preference number: 1 (lower is better)
Translates to: IMGPRFCEGQSPKTC*GLLRAHAPKCLKHF
Trigger: AAAATGCTTCAGGCATTTGGGAGCGTGCGCCCTGAGAAGGCCTCAGCAAGTTTTTGGAGATTGTCCTTCACAGAAACGGGGTCCCATTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000332468.5
3UTR TCA 90 bp AAGTTCTCTCTTATTCACGTCGGTGTCAGAGAACATTTGAGGGTCTaGGTGTCAGGCAAGGCTGTCACACTGTCACAGAACATCCCCCAG +
Preference number: 1 (lower is better)
Translates to: KFSLIHVGVREHLRV*VSGKAVTLSQNIPQ
Trigger: CTGGGGGATGTTCTGTGACAGTGTGACAGCCTTGCCTGACACTCAGACCCTCAAATGTTCTCTGACACCGACGTGAATAAGAGAGAACTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000332468.5
3UTR CCA 90 bp CCCCTGTTTGTTATGGGCTATCCCGTAATCCACACAACCACCCACTaGGGAAGAACCACTGTTCCCATGATGGGAAGGAAACTAAAACTG +
Preference number: 1 (lower is better)
Translates to: PLFVMGYPVIHTTTH*GRTTVPMMGRKLKL
Trigger: CAGTTTTAGTTTCCTTCCCATCATGGGAACAGTGGTTCTTCCCCAGTGGGTGGTTGTGTGGATTACGGGATAGCCCATAACAAACAGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332468.5
3UTR TCA 90 bp GAGGGAGAAAGTTCTCTCTTATTCACGTCGGTGTCAGAGAACATTTaGGGGTCTGAGTGTCAGGCAAGGCTGTCACACTGTCACAGAACA +
Preference number: 1 (lower is better)
Translates to: EGESSLLFTSVSENI*GSECQARLSHCHRT
Trigger: TGTTCTGTGACAGTGTGACAGCCTTGCCTGACACTCAGACCCTCAAATGTTCTCTGACACCGACGTGAATAAGAGAGAACTTTCTCCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332468.5
3UTR TCA 90 bp CCTACTTTGAACCGCAGTTTCTTCATCTATACAACGGAGGTCATGTaGCCCCTGTTTGTTATGGGCTATCCCGTAATCCACACAACCACC +
Preference number: 1 (lower is better)
Translates to: PTLNRSFFIYTTEVM*PLFVMGYPVIHTTT
Trigger: GGTGGTTGTGTGGATTACGGGATAGCCCATAACAAACAGGGGTCACATGACCTCCGTTGTATAGATGAAGAAACTGCGGTTCAAAGTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332468.5
3UTR TCA 90 bp TTAGGCTGTGCTTTTGTGAAACATTTTTCACATTTCCAGAAGGCGTaGGGATGTTATGGATCCGATGCCTTCCAGTCCCATATGCCCTCT +
Preference number: 1 (lower is better)
Translates to: LGCAFVKHFSHFQKA*GCYGSDAFQSHMPS
Trigger: AGAGGGCATATGGGACTGGAAGGCATCGGATCCATAACATCCTCACGCCTTCTGGAAATGTGAAAAATGTTTCACAAAAGCACAGCCTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000332468.5
3UTR GCA 90 bp ACATTTTTCACATTTCCAGAAGGCGTGAGGATGTTATGGATCCGATaGCTTCCAGTCCCATATGCCCTCTATAGCTGTCATTCCTTTAAG +
Preference number: 1 (lower is better)
Translates to: TFFTFPEGVRMLWIR*LPVPYALYSCHSFK
Trigger: CTTAAAGGAATGACAGCTATAGAGGGCATATGGGACTGGAAGGCATCGGATCCATAACATCCTCACGCCTTCTGGAAATGTGAAAAATGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000332468.5
3UTR CCA 90 bp TTTTGTGAAACATTTTTCACATTTCCAGAAGGCGTGAGGATGTTATaGATCCGATGCCTTCCAGTCCCATATGCCCTCTATAGCTGTCAT +
Preference number: 1 (lower is better)
Translates to: FCETFFTFPEGVRML*IRCLPVPYALYSCH
Trigger: ATGACAGCTATAGAGGGCATATGGGACTGGAAGGCATCGGATCCATAACATCCTCACGCCTTCTGGAAATGTGAAAAATGTTTCACAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000332468.5
3UTR-3UTR GCA 90 bp GCCGCAGGCGGCCCCTCTGCAGGCGATGGGCTGCCTCCACTCCACGGGGCACACGAGCCAGAAGGCCTGTaGTCAAGTCCAGGGGAAGGA +
Preference number: 2 (lower is better)
Translates to: AAGGPSAGDGLPPLHGAHEPEGL*SSPGEG
Trigger: TCCTTCCCCTGGACTTGAGCACAGGCCTTCTGGCTC...GTGTGCCCCGTGGAGTGGAGGCAGCCCATCGCCTGCAGAGGGGCCGCCTGCGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000332468.5
3UTR-3UTR CCA 90 bp GCTGCAGAGCGAGCGGGAGCAGGGGCAATGCCAGCTCAGGGCCCAGCAGGTGAGGGGAGCGGCTGCTGGTaGCCTTCCCAGACCTGCACA +
Preference number: 2 (lower is better)
Translates to: AAERAGAGAMPAQGPAGEGSGCW*PSQTCT
Trigger: TGTGCAGGTCTGGGAAGGCCACCAGCAGCCGCTCCC...CTCACCTGCTGGGCCCTGAGCTGGCATTGCCCCTGCTCCCGCTCGCTCTGCAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332468.5
3UTR-3UTR CCA 90 bp GCCTCCCTGCTTGTCCGTTCCTGCTTAGTCTCTGCAGGCCAAGCAGCGAGCCCTGTTCCTGAGGGAGGCTaGGGTGCCCCGGGCACCCCC +
Preference number: 2 (lower is better)
Translates to: ASLLVRSCLVSAGQAASPVPEGG*GAPGTP
Trigger: GGGGGTGCCCGGGGCACCCCAGCCTCCCTCAGGAAC...AGGGCTCGCTGCTTGGCCTGCAGAGACTAAGCAGGAACGGACAAGCAGGGAGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332468.5
3UTR-3UTR TCA 90 bp GTCTCAGGTGGGTCAGCCTCAGCCTCTATCTCCCCACTGTGGTGGCCTTCACACGCCTCAAGGTGGGCCTaGGAGGGCGGGCCCTTGGGG +
Preference number: 2 (lower is better)
Translates to: VSGGSASASISPLWWPSHASRWA*EGGPLG
Trigger: CCCCAAGGGCCCGCCCTCTCAGGCCCACCTTGAGGC...GTGTGAAGGCCACCACAGTGGGGAGATAGAGGCTGAGGCTGACCCACCTGAGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332468.5
3UTR-3UTR GCA 90 bp GCCGCAGGCGGCCCCTCTGCAGGCGATGGGCTGCCTCCACTCCACGGGGCACACCCGAGGGGTAGTAGATaGTGTAGCCTCCTTAGTTCC +
Preference number: 2 (lower is better)
Translates to: AAGGPSAGDGLPPLHGAHPRGSR*CSLLSS
Trigger: GGAACTAAGGAGGCTACAGCATCTACTACCCCTCGG...GTGTGCCCCGTGGAGTGGAGGCAGCCCATCGCCTGCAGAGGGGCCGCCTGCGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000332468.5
3UTR-3UTR CCA 90 bp GCTGCAGAGCGAGCGGGAGCAGGGGCAATGCCAGCTCAGGGCCCAGCAGGTGAGAGGGGAAGAGCAGCCTaGCGGAATTCCTGCCGTTCC +
Preference number: 2 (lower is better)
Translates to: AAERAGAGAMPAQGPAGERGRAA*RNSCRS
Trigger: GGAACGGCAGGAATTCCGCCAGGCTGCTCTTCCCCT...CTCACCTGCTGGGCCCTGAGCTGGCATTGCCCCTGCTCCCGCTCGCTCTGCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332468.5
3UTR-3UTR CCA 90 bp CCTCCCTGCAGTTCCCAGCCACGACCTTCAAGAACACCAGGAGTGTCCACTCCCTGCCGGCTGCCACCGTaGGCCGCTGGGCAGCAGAGC +
Preference number: 2 (lower is better)
Translates to: PPCSSQPRPSRTPGVSTPCRLPP*AAGQQS
Trigger: GCTCTGCTGCCCAGCGGCCCACGGTGGCAGCCGGCA...GGGAGTGGACACTCCTGGTGTTCTTGAAGGTCGTGGCTGGGAACTGCAGGGAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332468.5
3UTR-3UTR TCA 90 bp CCTCCCTGCAGTTCCCAGCCACGACCTTCAAGAACACCAGGAGTGTCCACTCCCGGCCCTGGTGCCCTGTaGCGCATGCGCCAGCGTCCA +
Preference number: 2 (lower is better)
Translates to: PPCSSQPRPSRTPGVSTPGPGAL*RMRQRP
Trigger: TGGACGCTGGCGCATGCGTCACAGGGCACCAGGGCC...GGGAGTGGACACTCCTGGTGTTCTTGAAGGTCGTGGCTGGGAACTGCAGGGAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332468.5
3UTR-3UTR GCA 90 bp CAAGGCCAGGCCTGGCTTCACAGAGCTCCCTGGTCCAGTGGAGAAGAGCCAGGCTGGCCTTCCCAGACCTaGACAGGCCCACCGAGACCC +
Preference number: 2 (lower is better)
Translates to: QGQAWLHRAPWSSGEEPGWPSQT*TGPPRP
Trigger: GGGTCTCGGTGGGCCTGTGCAGGTCTGGGAAGGCCA...GCCTGGCTCTTCTCCACTGGACCAGGGAGCTCTGTGAAGCCAGGCCTGGCCTTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332468.5
3UTR-3UTR CCA 90 bp CAAGGCCAGGCCTGGCTTCACAGAGCTCCCTGGTCCAGTGGAGAAGAGCCAGGCGCAGCGCAGCCCCTGTaGACCCACCACAGCACGCAA +
Preference number: 2 (lower is better)
Translates to: QGQAWLHRAPWSSGEEPGAAQPL*THHSTQ
Trigger: TTGCGTGCTGTGGTGGGTCCACAGGGGCTGCGCTGC...GCCTGGCTCTTCTCCACTGGACCAGGGAGCTCTGTGAAGCCAGGCCTGGCCTTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332468.5
3UTR CAA 90 bp CATCTGCGTTCCAAGGGCCGGGGTCTTCAAGCTGGGATCCTGGCCTaGACCAGGTCCGGTGTGCATCTGCCTGCTGCCAGCTTCCCCCGA +
Preference number: 2 (lower is better)
Translates to: HLRSKGRGLQAGILA*TRSGVHLPAASFPR
Trigger: TCGGGGGAAGCTGGCAGCAGGCAGATGCACACCGGACCTGGTCAAGGCCAGGATCCCAGCTTGAAGACCCCGGCCCTTGGAACGCAGATG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000332468.5
3UTR CAA 90 bp TGTAAGCCAGGTCCTCTCACGGCTCCTAGAGGCCGTCCACCTTCCTaGCCATGGGGCTCCCTCCATCGGGGTGCAGGCAGGAAGGGTCCA +
Preference number: 2 (lower is better)
Translates to: CKPGPLTAPRGRPPS*PWGSLHRGAGRKGP
Trigger: TGGACCCTTCCTGCCTGCACCCCGATGGAGGGAGCCCCATGGCAAGGAAGGTGGACGGCCTCTAGGAGCCGTGAGAGGACCTGGCTTACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000631046.2
3UTR-3UTR TCA 90 bp TCCAGAACAGGACGGTTTCTAAGACCTCTGGTCCTAGCCAGGCCCAGGAAGGGACCTGGGAGCCCAGGCTaGGGACCGGGGTGCAGGCAG +
Preference number: 2 (lower is better)
Translates to: SRTGRFLRPLVLARPRKGPGSPG*GPGCRQ
Trigger: CTGCCTGCACCCCGGTCCTCAGCCTGGGCTCCCAGG...TCCCTTCCTGGGCCTGGCTAGGACCAGAGGTCTTAGAAACCGTCCTGTTCTGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215798.10
ENST00000382363.8
3UTR-3UTR GCA 90 bp GCTGCAGAGCGAGCGGGAGCAGGGGCAATGCCAGCTCAGGGCCCAGCAGGTGAGTGCAGCTCCCTAGCCTaGAGCAAGGGTGTTAAAGCC +
Preference number: 2 (lower is better)
Translates to: AAERAGAGAMPAQGPAGECSSLA*SKGVKA
Trigger: GGCTTTAACACCCTTGCTGCAGGCTAGGGAGCTGCA...CTCACCTGCTGGGCCCTGAGCTGGCATTGCCCCTGCTCCCGCTCGCTCTGCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332468.5
3UTR-3UTR GCA 90 bp AATCAAGCCCCACACAGTGTGGCGGTTAAGAACGCAGGCCTTGGGGATCATGCCCGCAGGCGGCCCCTCTaGAGGCGATGGGCTGCCTCC +
Preference number: 2 (lower is better)
Translates to: NQAPHSVAVKNAGLGDHARRRPL*RRWAAS
Trigger: GGAGGCAGCCCATCGCCTGCAGAGGGGCCGCCTGCG...GGCATGATCCCCAAGGCCTGCGTTCTTAACCGCCACACTGTGTGGGGCTTGATT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000332468.5
3UTR-3UTR CCA 90 bp GTGGACATGGTGGGGCCCTCATCCTTCCTCCCACCCACTGGGCTTGCTGTCCTGCATCCTGTCCTGTCCTaGGAGCCCAGGCTGAGGACC +
Preference number: 2 (lower is better)
Translates to: VDMVGPSSFLPPTGLAVLHPVLS*EPRLRT
Trigger: GGTCCTCAGCCTGGGCTCCCAGGACAGGACAGGATG...CAGGACAGCAAGCCCAGTGGGTGGGAGGAAGGATGAGGGCCCCACCATGTCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215798.10
ENST00000382363.8
3UTR-3UTR CCA 90 bp GAGCCAGCCATCTGCGTTCCAAGGGCCGGGGTCTTCAAGCTGGGATCCTGGCCTCATCCTGTCCTGTCCTaGGAGCCCAGGCTGAGGACC +
Preference number: 2 (lower is better)
Translates to: EPAICVPRAGVFKLGSWPHPVLS*EPRLRT
Trigger: GGTCCTCAGCCTGGGCTCCCAGGACAGGACAGGATG...AGGCCAGGATCCCAGCTTGAAGACCCCGGCCCTTGGAACGCAGATGGCTGGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332468.5
3UTR-3UTR CCA 90 bp CAAGGCCAGGCCTGGCTTCACAGAGCTCCCTGGTCCAGTGGAGAAGAGCCAGGCGGGAGAAGCAAGGCCTaGAGCAGGCGACTACGGACC +
Preference number: 2 (lower is better)
Translates to: QGQAWLHRAPWSSGEEPGGRSKA*SRRLRT
Trigger: GGTCCGTAGTCGCCTGCTCCAGGCCTTGCTTCTCCC...GCCTGGCTCTTCTCCACTGGACCAGGGAGCTCTGTGAAGCCAGGCCTGGCCTTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332468.5
3UTR-3UTR CCA 90 bp CTTGCGGCTGTGGGACTGAGGTCCCCATGTCCTCGCTGGCTGGCTGTAAGCCAGCCACCTTCCTTGCCATaGGGCTCCCTCCATCGGGGT +
Preference number: 2 (lower is better)
Translates to: LAAVGLRSPCPRWLAVSQPPSLP*GSLHRG
Trigger: ACCCCGATGGAGGGAGCCCCATGGCAAGGAAGGTGG...CTGGCTTACAGCCAGCCAGCGAGGACATGGGGACCTCAGTCCCACAGCCGCAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000631046.2
3UTR CAA 90 bp CAGCCACGACCTTCAAGAACACCAGGAGTGTCCACTCCCAGACCATaGAGACGGCCCTGGTGCCCTGTGACGCATGCGCCAGCGTCCAGG +
Preference number: 2 (lower is better)
Translates to: QPRPSRTPGVSTPRP*RRPWCPVTHAPASR
Trigger: CCTGGACGCTGGCGCATGCGTCACAGGGCACCAGGGCCGTCTCAATGGTCTGGGAGTGGACACTCCTGGTGTTCTTGAAGGTCGTGGCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332468.5
3UTR-3UTR TCA 90 bp AGTATCCCGGTCAGCAACACAAAGCCGCAGCCAAGGATTCCAGAACAGGACGGTCCTGGGAGCCCAGGCTaGGGACCGGGGTGCAGGCAG +
Preference number: 2 (lower is better)
Translates to: SIPVSNTKPQPRIPEQDGPGSPG*GPGCRQ
Trigger: CTGCCTGCACCCCGGTCCTCAGCCTGGGCTCCCAGG...ACCGTCCTGTTCTGGAATCCTTGGCTGCGGCTTTGTGTTGCTGACCGGGATACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382363.8
3UTR-3UTR TCA 90 bp CCTGCAGTTCCCAGCCACGACCTTCAAGAACACCAGGAGTGTCCACTCCCAGACCTCAGGAGCCAGGCCTaGGCCTCCGTCTGTCCCAGG +
Preference number: 2 (lower is better)
Translates to: PAVPSHDLQEHQECPLPDLRSQA*ASVCPR
Trigger: CCTGGGACAGACGGAGGCTCAGGCCTGGCTCCTGAG...GTCTGGGAGTGGACACTCCTGGTGTTCTTGAAGGTCGTGGCTGGGAACTGCAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332468.5
3UTR-3UTR TCA 90 bp CAAGGCCAGGCCTGGCTTCACAGAGCTCCCTGGTCCAGTGGAGAAGAGCCAGGCACAGGAGGGTGGGCCTaGCCAACCACACTATTGGCG +
Preference number: 2 (lower is better)
Translates to: QGQAWLHRAPWSSGEEPGTGGWA*PTTLLA
Trigger: CGCCAATAGTGTGGTTGGTCAGGCCCACCCTCCTGT...GCCTGGCTCTTCTCCACTGGACCAGGGAGCTCTGTGAAGCCAGGCCTGGCCTTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332468.5
3UTR-3UTR GCA 90 bp GCCTCCCTGCTTGTCCGTTCCTGCTTAGTCTCTGCAGGCCAAGCAGCGAGCCCTCAGGACACTGGGGACTaGAGCTCCCTAGCCTGCAGC +
Preference number: 2 (lower is better)
Translates to: ASLLVRSCLVSAGQAASPQDTGD*SSLACS
Trigger: GCTGCAGGCTAGGGAGCTGCAGTCCCCAGTGTCCTG...AGGGCTCGCTGCTTGGCCTGCAGAGACTAAGCAGGAACGGACAAGCAGGGAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332468.5
3UTR-3UTR CCA 90 bp CAAGGCCAGGCCTGGCTTCACAGAGCTCCCTGGTCCAGTGGAGAAGAGCCAGGCCCACCTTCCTTGCCATaGGGCTCCCTCCATTGGGCT +
Preference number: 2 (lower is better)
Translates to: QGQAWLHRAPWSSGEEPGPPSLP*GSLHWA
Trigger: AGCCCAATGGAGGGAGCCCCATGGCAAGGAAGGTGG...GCCTGGCTCTTCTCCACTGGACCAGGGAGCTCTGTGAAGCCAGGCCTGGCCTTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332468.5
3UTR-3UTR GCA 90 bp AAGTTCCTGGCACCAGAAGATGGCCAGTGCCCACTGATGGGAGGCCTGAGGGATGGTCCGGTGTGCATCTaGCTGCTGCCAGCTTCCCCC +
Preference number: 2 (lower is better)
Translates to: KFLAPEDGQCPLMGGLRDGPVCI*LLPASP
Trigger: GGGGGAAGCTGGCAGCAGGCAGATGCACACCGGACC...ATCCCTCAGGCCTCCCATCAGTGGGCACTGGCCATCTTCTGGTGCCAGGAACTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332468.5
3UTR-3UTR GCA 90 bp AATCAAGCCCCACACAGTGTGGCGGTTAAGAACGCAGGCCTTGGGGATCATGCCAGGCCAGACGCCTGGTaGCCAGGGGCTCTGCCACAG +
Preference number: 2 (lower is better)
Translates to: NQAPHSVAVKNAGLGDHARPDAW*PGALPQ
Trigger: CTGTGGCAGAGCCCCTGGGCACCAGGCGTCTGGCCT...GGCATGATCCCCAAGGCCTGCGTTCTTAACCGCCACACTGTGTGGGGCTTGATT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000332468.5
3UTR-3UTR GCA 90 bp GAAAGGGGCAAACCAAAGGGAGACTCCCACCTCCAAGCCCACCACCAAGGGCGACTGCTCACAGGTCTGTaGCCCAGAGGCCAGACGCCT +
Preference number: 2 (lower is better)
Translates to: ERGKPKGDSHLQAHHQGRLLTGL*PRGQTP
Trigger: AGGCGTCTGGCCTCTGGGGCACAGACCTGTGAGCAG...TCGCCCTTGGTGGTGGGCTTGGAGGTGGGAGTCTCCCTTTGGTTTGCCCCTTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332468.5
3UTR-3UTR CCA 90 bp GACAGGCCACAGGGAGCTCCCAGAACCCTGGCGACAGCTACACTGGCCCCATATCCAGTGTGGACATGGTaGGGCCCTCATCCTTCCTCC +
Preference number: 2 (lower is better)
Translates to: DRPQGAPRTLATATLAPYPVWTW*GPHPSS
Trigger: GGAGGAAGGATGAGGGCCCCACCATGTCCACACTGG...ATATGGGGCCAGTGTAGCTGTCGCCAGGGTTCTGGGAGCTCCCTGTGGCCTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215798.10
ENST00000382363.8
3UTR-3UTR CCA 90 bp AGGGCCCGGGGCATAGCTGTGCTCTGGGCAATGGGGCCTCACAGGAGTCCTCAGTGGGGCTCCCTCCATTaGGCTTGCTGTCCTGTCTAT +
Preference number: 2 (lower is better)
Translates to: RARGIAVLWAMGPHRSPQWGSLH*ACCPVY
Trigger: ATAGACAGGACAGCAAGCCCAATGGAGGGAGCCCCA...CTGAGGACTCCTGTGAGGCCCCATTGCCCAGAGCACAGCTATGCCCCGGGCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000332468.5
3UTR-3UTR CCA 90 bp CTCAGGTGGGTCAGCCTCAGCCTCTATCTCCCCACTGTGGTGGCCTTCACACCTATCAAGCCTGGAGCTTaGGGTGCGGGCCGCAGAGAG +
Preference number: 2 (lower is better)
Translates to: LRWVSLSLYLPTVVAFTPIKPGA*GAGRRE
Trigger: CTCTCTGCGGCCCGCACCCCAAGCTCCAGGCTTGAT...AGGTGTGAAGGCCACCACAGTGGGGAGATAGAGGCTGAGGCTGACCCACCTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332468.5
3UTR-3UTR TCA 90 bp GTATTCATTAGCTCCCAGTTCTGGCAGTCAGAAGTCCAGGTTCTGTGTGGCTGGCCTGGGAGCCCAGGCTaGGGACCGGGGTGCAGGCAG +
Preference number: 2 (lower is better)
Translates to: VFISSQFWQSEVQVLCGWPGSPG*GPGCRQ
Trigger: CTGCCTGCACCCCGGTCCTCAGCCTGGGCTCCCAGG...CCAGCCACACAGAACCTGGACTTCTGACTGCCAGAACTGGGAGCTAATGAATAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332468.5
ENST00000630264.1
3UTR-3UTR TCA 90 bp GGCCACAGGGAGCTCCCAGAACCCTGGCGACAGCTACACTGGCCCCATATTCTCGTGACCTCTCTTCCTTaGCTGACAGGTCCCAGCCCT +
Preference number: 2 (lower is better)
Translates to: GHRELPEPWRQLHWPHILVTSLP*LTGPSP
Trigger: AGGGCTGGGACCTGTCAGTCAAGGAAGAGAGGTCAC...GAGAATATGGGGCCAGTGTAGCTGTCGCCAGGGTTCTGGGAGCTCCCTGTGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215798.10
ENST00000382363.8
3UTR-3UTR CCA 90 bp GGCCACAGGGAGCTCCCAGAACCCTGGCGACAGCTACACTGGCCCCATATTCTCTTCCCAGTGTGGACATaGTGGGGCCCTCATCCTTCC +
Preference number: 2 (lower is better)
Translates to: GHRELPEPWRQLHWPHILFPVWT*WGPHPS
Trigger: GGAAGGATGAGGGCCCCACCATGTCCACACTGGGAA...GAGAATATGGGGCCAGTGTAGCTGTCGCCAGGGTTCTGGGAGCTCCCTGTGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000215798.10
ENST00000382363.8
3UTR CAA 90 bp CTCCCAATCAAGCCCCACACAGTGTGGCGGTTAAGAACGCAGGCCTaGGGGATCATGCCTTGCTCCCTGGCTCTGACATCCCTGTGGGAC +
Preference number: 2 (lower is better)
Translates to: LPIKPHTVWRLRTQA*GIMPCSLALTSLWD
Trigger: GTCCCACAGGGATGTCAGAGCCAGGGAGCAAGGCATGATCCCCAAGGCCTGCGTTCTTAACCGCCACACTGTGTGGGGCTTGATTGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332468.5
3UTR-3UTR TCA 90 bp AGACAGGCCACAGGGAGCTCCCAGAACCCTGGCGACAGCTACACTGGCCCCATACCTCTCTTCCTTGACTaGCAGGTCCCAGCCCTAGAT +
Preference number: 2 (lower is better)
Translates to: RQATGSSQNPGDSYTGPIPLFLD*QVPALD
Trigger: ATCTAGGGCTGGGACCTGTCAGTCAAGGAAGAGAGG...TATGGGGCCAGTGTAGCTGTCGCCAGGGTTCTGGGAGCTCCCTGTGGCCTGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215798.10
ENST00000382363.8
3UTR-3UTR GCA 90 bp CAAGGCCAGGCCTGGCTTCACAGAGCTCCCTGGTCCAGTGGAGAAGAGCCAGGCGCGCACGCTCCCAAATaGCTGAAGCATTTTCCCTTG +
Preference number: 2 (lower is better)
Translates to: QGQAWLHRAPWSSGEEPGAHAPK*LKHFPL
Trigger: CAAGGGAAAATGCTTCAGGCATTTGGGAGCGTGCGC...GCCTGGCTCTTCTCCACTGGACCAGGGAGCTCTGTGAAGCCAGGCCTGGCCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332468.5
3UTR-3UTR GCA 90 bp CCTGCAGGCCTGTCCCATGTCTTTTCTTGGGTAGGGACGGTGCCCCAGGGCGCTACCACAGCACGCAAGTaGTTCATGCGTCATCCACTC +
Preference number: 2 (lower is better)
Translates to: PAGLSHVFSWVGTVPQGATTARK*FMRHPL
Trigger: GAGTGGATGACGCATGAAGCACTTGCGTGCTGTGGT...AGCGCCCTGGGGCACCGTCCCTACCCAAGAAAAGACATGGGACAGGCCTGCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332468.5
3UTR-3UTR GCA 90 bp CTCAGGCGCCCACCAACTCCGTGCCATGTATTCATTAGCTCCCAGTTCTGGCAGCTCCCTCCATCGGGGTaGAGGCAGGAAGGGTCCATC +
Preference number: 2 (lower is better)
Translates to: LRRPPTPCHVFISSQFWQLPPSG*RQEGSI
Trigger: GATGGACCCTTCCTGCCTGCACCCCGATGGAGGGAG...CTGCCAGAACTGGGAGCTAATGAATACATGGCACGGAGTTGGTGGGCGCCTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000631046.2
3UTR-3UTR CCA 90 bp GAAAGGGGCAAACCAAAGGGAGACTCCCACCTCCAAGCCCACCACCAAGGGCGAATTCTCCCGGGCTCCTaGAGCCAGAAGGAAGCATCC +
Preference number: 2 (lower is better)
Translates to: ERGKPKGDSHLQAHHQGRILPGS*SQKEAS
Trigger: GGATGCTTCCTTCTGGCTCCAGGAGCCCGGGAGAAT...TCGCCCTTGGTGGTGGGCTTGGAGGTGGGAGTCTCCCTTTGGTTTGCCCCTTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332468.5
3UTR CAA 90 bp GCACCAGAAGATGGCCAGTGCCCACTGATGGGAGGCCTGAGGGATTaGCCCTTTCTGAGCCTCATCACAGTTGCCTCCATGGACGACACC +
Preference number: 2 (lower is better)
Translates to: APEDGQCPLMGGLRD*PFLSLITVASMDDT
Trigger: GGTGTCGTCCATGGAGGCAACTGTGATGAGGCTCAGAAAGGGCAAATCCCTCAGGCCTCCCATCAGTGGGCACTGGCCATCTTCTGGTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332468.5
3UTR-3UTR TCA 90 bp GAAAGGGGCAAACCAAAGGGAGACTCCCACCTCCAAGCCCACCACCAAGGGCGATCTCCAAAAACTTGCTaGGGCCTTCTCAGGGCGCAC +
Preference number: 2 (lower is better)
Translates to: ERGKPKGDSHLQAHHQGRSPKTC*GLLRAH
Trigger: GTGCGCCCTGAGAAGGCCTCAGCAAGTTTTTGGAGA...TCGCCCTTGGTGGTGGGCTTGGAGGTGGGAGTCTCCCTTTGGTTTGCCCCTTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000332468.5
3UTR-3UTR TCA 90 bp ACGGACCTGCGGCTAACCATCCTGGAGCTAGAACGGGAGCTGGAGGAGCTGAAGCTTGAGCTGGCCGTGTaGCCTTGGACAGCTCACTTT +
Preference number: 2 (lower is better)
Translates to: TDLRLTILELERELEELKLELAV*PWTAHF
Trigger: AAAGTGAGCTGTCCAAGGTCACACGGCCAGCTCAAG...CTTCAGCTCCTCCAGCTCCCGTTCTAGCTCCAGGATGGTTAGCCGCAGGTCCGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332468.5
3UTR-3UTR GCA 90 bp GCCTCCCTGCTTGTCCGTTCCTGCTTAGTCTCTGCAGGCCAAGCAGCGAGCCCTCGCCCACCAACTCCGTaGCATGTATTCATTAGCTCC +
Preference number: 2 (lower is better)
Translates to: ASLLVRSCLVSAGQAASPRPPTP*HVFISS
Trigger: GGAGCTAATGAATACATGGCACGGAGTTGGTGGGCG...AGGGCTCGCTGCTTGGCCTGCAGAGACTAAGCAGGAACGGACAAGCAGGGAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332468.5
3UTR-3UTR GCA 90 bp GACACTGGGGACTGCAGCTCCCTAGCCTGCAGCAAGGGTGTTAAAGCCAGGCGGTATGGTCATCTTCCCTaGAGGTTGGGGGACAGGGAA +
Preference number: 2 (lower is better)
Translates to: DTGDCSSLACSKGVKARRYGHLP*RLGDRE
Trigger: TTCCCTGTCCCCCAACCTGCAGGGAAGATGACCATA...CCGCCTGGCTTTAACACCCTTGCTGCAGGCTAGGGAGCTGCAGTCCCCAGTGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000332468.5
3UTR-3UTR CCA 90 bp GATGACCAAACTGGGTTGCCACCTCCTACCGAGAAAGCGCCTTCTATTTTCCAAGAGAGGGCGGGCCCTTaGGGACCAGGAGGAAGCCCC +
Preference number: 2 (lower is better)
Translates to: DDQTGLPPPTEKAPSIFQERAGP*GPGGSP
Trigger: GGGGCTTCCTCCTGGTCCCCAAGGGCCCGCCCTCTC...TTGGAAAATAGAAGGCGCTTTCTCGGTAGGAGGTGGCAACCCAGTTTGGTCATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332468.5
3UTR-3UTR CCA 90 bp AGGGCCCGGGGCATAGCTGTGCTCTGGGCAATGGGGCCTCACAGGAGTCCTCAGCTGCTTTCCATTCAGTaGGTGTTAGGAAATGTGGGC +
Preference number: 2 (lower is better)
Translates to: RARGIAVLWAMGPHRSPQLLSIQ*VLGNVG
Trigger: GCCCACATTTCCTAACACCCACTGAATGGAAAGCAG...CTGAGGACTCCTGTGAGGCCCCATTGCCCAGAGCACAGCTATGCCCCGGGCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332468.5
3UTR-3UTR CCA 90 bp CTCCCTGCTCTGCCCTATCAATGTGTGTCTGTGGGCAAGCTCTTCCCCTCTCTGCAATCAGATCAAGCCTaGAGCTTGGGGTGCGGGCCG +
Preference number: 2 (lower is better)
Translates to: LPALPYQCVSVGKLFPSLQSDQA*SLGCGP
Trigger: CGGCCCGCACCCCAAGCTCCAGGCTTGATCTGATTG...CAGAGAGGGGAAGAGCTTGCCCACAGACACACATTGATAGGGCAGAGCAGGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332468.5
3UTR-3UTR TCA 90 bp CTGGGAGCTGCCTGTAAGGAGGGCAGACTCACGTCACAGGATTGCAGAGAAGGTCCTAGATCCTCAGTCTaGAGCTGTGGGGCCCTCCTT +
Preference number: 2 (lower is better)
Translates to: LGAACKEGRLTSQDCREGPRSSV*SCGALL
Trigger: AAGGAGGGCCCCACAGCTTCAGACTGAGGATCTAGG...ACCTTCTCTGCAATCCTGTGACGTGAGTCTGCCCTCCTTACAGGCAGCTCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215798.10
ENST00000382363.8
3UTR-3UTR TCA 90 bp CCTGCAGTTCCCAGCCACGACCTTCAAGAACACCAGGAGTGTCCACTCCCAGACGCCCACCTCATCACATaGGGCCTTAGGCTGTGCTTT +
Preference number: 2 (lower is better)
Translates to: PAVPSHDLQEHQECPLPDAHLIT*GLRLCF
Trigger: AAAGCACAGCCTAAGGCCTCATGTGATGAGGTGGGC...GTCTGGGAGTGGACACTCCTGGTGTTCTTGAAGGTCGTGGCTGGGAACTGCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332468.5
3UTR-3UTR TCA 90 bp CTCCCTGCTCTGCCCTATCAATGTGTGTCTGTGGGCAAGCTCTTCCCCTCTCTGTCGGGAGAAGGAAGATaGGCTAGGAGGCCTGGTGCA +
Preference number: 2 (lower is better)
Translates to: LPALPYQCVSVGKLFPSLSGEGR*ARRPGA
Trigger: TGCACCAGGCCTCCTAGCTCATCTTCCTTCTCCCGA...CAGAGAGGGGAAGAGCTTGCCCACAGACACACATTGATAGGGCAGAGCAGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332468.5
3UTR-3UTR GCA 90 bp CTGGCCACTGTAGTCTCAGCCCCCAGGAATTCCCAGACAGGCCACAGGGAGCTCCTCACGTCACAGGATTaGAGAGAAGGTCCCAAAGTG +
Preference number: 2 (lower is better)
Translates to: LATVVSAPRNSQTGHRELLTSQD*REGPKV
Trigger: CACTTTGGGACCTTCTCTGCAATCCTGTGACGTGAG...GAGCTCCCTGTGGCCTGTCTGGGAATTCCTGGGGGCTGAGACTACAGTGGCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000215798.10
ENST00000382363.8
3UTR-3UTR GCA 90 bp GGCCACAGGGAGCTCCCAGAACCCTGGCGACAGCTACACTGGCCCCATATTCTCCTCACGTCACAGGATTaGAGAGAAGGTCCCAAAGTG +
Preference number: 2 (lower is better)
Translates to: GHRELPEPWRQLHWPHILLTSQD*REGPKV
Trigger: CACTTTGGGACCTTCTCTGCAATCCTGTGACGTGAG...GAGAATATGGGGCCAGTGTAGCTGTCGCCAGGGTTCTGGGAGCTCCCTGTGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215798.10
ENST00000382363.8
3UTR-3UTR GCA 90 bp AAGATGGCCACCCTGGAGAGAGAACTGAAACAGCAGCGGGAGTCCACACAGGCTTTCCTGCTTAGTCTCTaGAGGCCAAGCAGCGAGCCC +
Preference number: 2 (lower is better)
Translates to: KMATLERELKQQRESTQAFLLSL*RPSSEP
Trigger: GGGCTCGCTGCTTGGCCTGCAGAGACTAAGCAGGAA...AGCCTGTGTGGACTCCCGCTGCTGTTTCAGTTCTCTCTCCAGGGTGGCCATCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332468.5
3UTR-3UTR CCA 90 bp CTGGCCACTGTAGTCTCAGCCCCCAGGAATTCCCAGACAGGCCACAGGGAGCTCCTTTCCTTATTGACCTaGGAGCTGCCTGTAAGGAGG +
Preference number: 2 (lower is better)
Translates to: LATVVSAPRNSQTGHRELLSLLT*ELPVRR
Trigger: CCTCCTTACAGGCAGCTCCCAGGTCAATAAGGAAAG...GAGCTCCCTGTGGCCTGTCTGGGAATTCCTGGGGGCTGAGACTACAGTGGCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000215798.10
ENST00000382363.8
3UTR-3UTR CCA 90 bp ATCCTGTGGCTTCGAGTATCCCGGTCAGCAACACAAAGCCGCAGCCAAGGATTCAGGCAGTGGGACCCATaGCTCCCAGTGCTTGAGGAC +
Preference number: 2 (lower is better)
Translates to: ILWLRVSRSATQSRSQGFRQWDP*LPVLED
Trigger: GTCCTCAAGCACTGGGAGCCATGGGTCCCACTGCCT...GAATCCTTGGCTGCGGCTTTGTGTTGCTGACCGGGATACTCGAAGCCACAGGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382363.8
3UTR CAA 90 bp GGCCTTCTCAGGGCGCACGCTCCCAAATGCCTGAAGCATTTTCCCTaGGTGAAGAGGCCGTCAGGTAGAGCACCTCAGTTCACAGAGAAG +
Preference number: 2 (lower is better)
Translates to: GLLRAHAPKCLKHFP*VKRPSGRAPQFTEK
Trigger: CTTCTCTGTGAACTGAGGTGCTCTACCTGACGGCCTCTTCACCAAGGGAAAATGCTTCAGGCATTTGGGAGCGTGCGCCCTGAGAAGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332468.5
3UTR CAA 90 bp CAGGGAAAGAGGGCTCCACTGTCAGGGAATGGGGGATCATCTATATaGGGCATCTGCTCCCTGAGATGCCTCCAGGTGTGGGGGTTGACT +
Preference number: 2 (lower is better)
Translates to: QGKRAPLSGNGGSSI*GICSLRCLQVWGLT
Trigger: AGTCAACCCCCACACCTGGAGGCATCTCAGGGAGCAGATGCCCAATATAGATGATCCCCCATTCCCTGACAGTGGAGCCCTCTTTCCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000332468.5
3UTR CAA 90 bp TATCTGACTACCAAGTTAATCAAGCCCTCCTCCCCAGTGCTAGGCTaGCCCCAGACCTGCCAAGAGCCAGAGAGCATCCCTGTCAGAGCC +
Preference number: 2 (lower is better)
Translates to: YLTTKLIKPSSPVLG*PQTCQEPESIPVRA
Trigger: GGCTCTGACAGGGATGCTCTCTGGCTCTTGGCAGGTCTGGGGCAAGCCTAGCACTGGGGAGGAGGGCTTGATTAACTTGGTAGTCAGATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332468.5
3UTR-3UTR TCA 90 bp ATCCTGTGGCTTCGAGTATCCCGGTCAGCAACACAAAGCCGCAGCCAAGGATTCCCTAGATCCTCAGTCTaGAGCTGTGGGGCCCTCCTT +
Preference number: 2 (lower is better)
Translates to: ILWLRVSRSATQSRSQGFPRSSV*SCGALL
Trigger: AAGGAGGGCCCCACAGCTTCAGACTGAGGATCTAGG...GAATCCTTGGCTGCGGCTTTGTGTTGCTGACCGGGATACTCGAAGCCACAGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382363.8
3UTR-3UTR TCA 90 bp CTCCCTGCTCTGCCCTATCAATGTGTGTCTGTGGGCAAGCTCTTCCCCTCTCTGACCCTTCCACGCATGTaGCCAGCATTCCCTAGACAC +
Preference number: 2 (lower is better)
Translates to: LPALPYQCVSVGKLFPSLTLPRM*PAFPRH
Trigger: GTGTCTAGGGAATGCTGGTCACATGCGTGGAAGGGT...CAGAGAGGGGAAGAGCTTGCCCACAGACACACATTGATAGGGCAGAGCAGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332468.5
3UTR-3UTR GCA 90 bp AGGACTCAGGATACAACTGAGGCAAGGCCAGGCCTGGCTTCACAGAGCTCCCTGTGTCCCCACAGCCTGTaGTCTTCACTACGTCACATG +
Preference number: 2 (lower is better)
Translates to: RTQDTTEARPGLASQSSLCPHSL*SSLRHM
Trigger: CATGTGACGTAGTGAAGAGCACAGGCTGTGGGGACA...CAGGGAGCTCTGTGAAGCCAGGCCTGGCCTTGCCTCAGTTGTATCCTGAGTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332468.5
3UTR-3UTR GCA 90 bp CCTGCAGTTCCCAGCCACGACCTTCAAGAACACCAGGAGTGTCCACTCCCAGACGAGCCTCATCACAGTTaGCTCCATGGACGACACCAA +
Preference number: 2 (lower is better)
Translates to: PAVPSHDLQEHQECPLPDEPHHS*LHGRHQ
Trigger: TTGGTGTCGTCCATGGAGGCAACTGTGATGAGGCTC...GTCTGGGAGTGGACACTCCTGGTGTTCTTGAAGGTCGTGGCTGGGAACTGCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332468.5
3UTR-3UTR CCA 90 bp GTCACAGGATTGCAGAGAAGGTCCCAAAGTGACCTCTCTTCCTTGACTGACAGGCATCCTGTCCTGTCCTaGGAGCCCAGGCTGAGGACC +
Preference number: 2 (lower is better)
Translates to: VTGLQRRSQSDLSSLTDRHPVLS*EPRLRT
Trigger: GGTCCTCAGCCTGGGCTCCCAGGACAGGACAGGATG...CCTGTCAGTCAAGGAAGAGAGGTCACTTTGGGACCTTCTCTGCAATCCTGTGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000215798.10
ENST00000382363.8
3UTR-3UTR CCA 90 bp GATTCCAGAACAGGACGGTTTCTAAGACCTCTGGTCCTAGCCAGGCCCAGGAAGTTCCCAGTGTGGACATaGTGGGGCCCTCATCCTTCC +
Preference number: 2 (lower is better)
Translates to: DSRTGRFLRPLVLARPRKFPVWT*WGPHPS
Trigger: GGAAGGATGAGGGCCCCACCATGTCCACACTGGGAA...CTTCCTGGGCCTGGCTAGGACCAGAGGTCTTAGAAACCGTCCTGTTCTGGAATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382363.8
3UTR-3UTR CCA 90 bp GAGCTCCCAGAACCCTGGCGACAGCTACACTGGCCCCATATTCTCTTTCCTTATCCCTCCTTCCCAGTGTaGACATGGTGGGGCCCTCAT +
Preference number: 2 (lower is better)
Translates to: ELPEPWRQLHWPHILFPYPSFPV*TWWGPH
Trigger: ATGAGGGCCCCACCATGTCCACACTGGGAAGGAGGG...ATAAGGAAAGAGAATATGGGGCCAGTGTAGCTGTCGCCAGGGTTCTGGGAGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000215798.10
ENST00000382363.8
3UTR-3UTR CCA 90 bp AGGGCCCTCGCTAGCCTGGGCATCTGCAATGTAGGCTGCAGGGAAAGAGGGCTCGAATTCCTCTCCAAGTaGGGTCTGTGTATGACTGGA +
Preference number: 2 (lower is better)
Translates to: RALASLGICNVGCRERGLEFLSK*GLCMTG
Trigger: TCCAGTCATACACAGACCCCACTTGGAGAGGAATTC...GAGCCCTCTTTCCCTGCAGCCTACATTGCAGATGCCCAGGCTAGCGAGGGCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332468.5
3UTR-3UTR CCA 90 bp GAAAGGGGCAAACCAAAGGGAGACTCCCACCTCCAAGCCCACCACCAAGGGCGATGGGCTTCAGCAACATaGGATGATGTGACACTGGAG +
Preference number: 2 (lower is better)
Translates to: ERGKPKGDSHLQAHHQGRWASAT*DDVTLE
Trigger: CTCCAGTGTCACATCATCCCATGTTGCTGAAGCCCA...TCGCCCTTGGTGGTGGGCTTGGAGGTGGGAGTCTCCCTTTGGTTTGCCCCTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332468.5
3UTR-3UTR CCA 90 bp CCTCCCTGCAGTTCCCAGCCACGACCTTCAAGAACACCAGGAGTGTCCACTCCCTGGCCACATCTGCCATaGGAATCCAGAATGGCTTCT +
Preference number: 2 (lower is better)
Translates to: PPCSSQPRPSRTPGVSTPWPHLP*ESRMAS
Trigger: AGAAGCCATTCTGGATTCCCATGGCAGATGTGGCCA...GGGAGTGGACACTCCTGGTGTTCTTGAAGGTCGTGGCTGGGAACTGCAGGGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332468.5
3UTR CAA 90 bp AGAACCCTGGCGACAGCTACACTGGCCCCATATTCTCTTTCCTTATaGACCTGGGAGCTGCCTGTAAGGAGGGCAGACTCACGTCACAGG +
Preference number: 2 (lower is better)
Translates to: RTLATATLAPYSLSL*TWELPVRRADSRHR
Trigger: CCTGTGACGTGAGTCTGCCCTCCTTACAGGCAGCTCCCAGGTCAATAAGGAAAGAGAATATGGGGCCAGTGTAGCTGTCGCCAGGGTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215798.10
ENST00000382363.8
3UTR CAA 90 bp GTAGGGGAAGCCTTTCTACCCCAAGTGGGTGCTGTTCTCTGTGCCTaGCAAACTGTCACAGCCGCCATGTATCAGGTGTCTGCTGTGACC +
Preference number: 2 (lower is better)
Translates to: VGEAFLPQVGAVLCA*QTVTAAMYQVSAVT
Trigger: GGTCACAGCAGACACCTGATACATGGCGGCTGTGACAGTTTGCAAGGCACAGAGAACAGCACCCACTTGGGGTAGAAAGGCTTCCCCTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332468.5
3UTR-3UTR GCA 90 bp CACAGATCACATGGAGAGGCAAGTGCAGTCCAACGACATCCGCATCCGGGTCCTCTGTCCTGTCTATCCTaGTGTCCCATCCTGTCCTGT +
Preference number: 2 (lower is better)
Translates to: HRSHGEASAVQRHPHPGPLSCLS*CPILSC
Trigger: ACAGGACAGGATGGGACAGCAGGATAGACAGGACAG...AGGACCCGGATGCGGATGTCGTTGGACTGCACTTGCCTCTCCATGTGATCTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332468.5
3UTR-3UTR CCA 90 bp CAGACTCACGTCACAGGATTGCAGAGAAGGTCCCAAAGTGACCTCTCTTCCTTGCCCTCCTTCCCAGTGTaGACATGGTGGGGCCCTCAT +
Preference number: 2 (lower is better)
Translates to: QTHVTGLQRRSQSDLSSLPSFPV*TWWGPH
Trigger: ATGAGGGCCCCACCATGTCCACACTGGGAAGGAGGG...CAAGGAAGAGAGGTCACTTTGGGACCTTCTCTGCAATCCTGTGACGTGAGTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215798.10
ENST00000382363.8
3UTR-3UTR CCA 90 bp GCTCTCTCAGGCGCCCACCAACTCCGTGCCATGTATTCATTAGCTCCCAGTTCTTGGGGCTCCCTCCATTaGGCTTGCTGTCCTGTCTAT +
Preference number: 2 (lower is better)
Translates to: ALSGAHQLRAMYSLAPSSWGSLH*ACCPVY
Trigger: ATAGACAGGACAGCAAGCCCAATGGAGGGAGCCCCA...AGAACTGGGAGCTAATGAATACATGGCACGGAGTTGGTGGGCGCCTGAGAGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332468.5
ENST00000630264.1
3UTR-3UTR CCA 90 bp CTCAGGTGGGTCAGCCTCAGCCTCTATCTCCCCACTGTGGTGGCCTTCACACCTTCTTGGTTCTTGGAATaGGTCCCCAAACCACACCAT +
Preference number: 2 (lower is better)
Translates to: LRWVSLSLYLPTVVAFTPSWFLE*VPKPHH
Trigger: ATGGTGTGGTTTGGGGACCCATTCCAAGAACCAAGA...AGGTGTGAAGGCCACCACAGTGGGGAGATAGAGGCTGAGGCTGACCCACCTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332468.5
3UTR CAA 90 bp TTCTCCCAGCCCCTCCAGACCCCTAAAGCACTAGGGCAAATCCTTTaGCAGAGCTGGCAGGAAGATGTGCAGTTAGCTGCTCGTGAGACA +
Preference number: 2 (lower is better)
Translates to: FSQPLQTPKALGQIL*QSWQEDVQLAARET
Trigger: TGTCTCACGAGCAGCTAACTGCACATCTTCCTGCCAGCTCTGCAAAAGGATTTGCCCTAGTGCTTTAGGGGTCTGGAGGGGCTGGGAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332468.5
3UTR CAA 90 bp AGGGTGGGCCTGACCAACCACACTATTGGCGATGACCAAACTGGGTaGCCACCTCCTACCGAGAAAGCGCCTTCTATTTTCCAAACCCAC +
Preference number: 2 (lower is better)
Translates to: RVGLTNHTIGDDQTG*PPPTEKAPSIFQTH
Trigger: GTGGGTTTGGAAAATAGAAGGCGCTTTCTCGGTAGGAGGTGGCAACCCAGTTTGGTCATCGCCAATAGTGTGGTTGGTCAGGCCCACCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332468.5
3UTR CAA 90 bp CCACACAGTGTGGCGGTTAAGAACGCAGGCCTTGGGGATCATGCCTaGCTCCCTGGCTCTGACATCCCTGTGGGACTTTGGAAAAATCTT +
Preference number: 2 (lower is better)
Translates to: PHSVAVKNAGLGDHA*LPGSDIPVGLWKNL
Trigger: AAGATTTTTCCAAAGTCCCACAGGGATGTCAGAGCCAGGGAGCAAGGCATGATCCCCAAGGCCTGCGTTCTTAACCGCCACACTGTGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000332468.5
3UTR-3UTR CCA 90 bp GAGCTCCCAGAACCCTGGCGACAGCTACACTGGCCCCATATTCTCTTTCCTTATCTTCCTCCCACCCACTaGGCTTGCTGTCCTGTCTAT +
Preference number: 2 (lower is better)
Translates to: ELPEPWRQLHWPHILFPYLPPTH*ACCPVY
Trigger: ATAGACAGGACAGCAAGCCCAGTGGGTGGGAGGAAG...ATAAGGAAAGAGAATATGGGGCCAGTGTAGCTGTCGCCAGGGTTCTGGGAGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215798.10
ENST00000382363.8
3UTR-3UTR TCA 90 bp TCCCAGAACCCTGGCGACAGCTACACTGGCCCCATATTCTCTTTCCTTATTGACCCTCTCTTCCTTGACTaGCAGGTCCCAGCCCTAGAT +
Preference number: 2 (lower is better)
Translates to: SQNPGDSYTGPIFSFLIDPLFLD*QVPALD
Trigger: ATCTAGGGCTGGGACCTGTCAGTCAAGGAAGAGAGG...GTCAATAAGGAAAGAGAATATGGGGCCAGTGTAGCTGTCGCCAGGGTTCTGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215798.10
ENST00000382363.8
3UTR-3UTR CCA 90 bp AGTATCCCGGTCAGCAACACAAAGCCGCAGCCAAGGATTCCAGAACAGGACGGTTGGCGACAGCTACACTaGCCCCATATTCTCTTTCCT +
Preference number: 2 (lower is better)
Translates to: SIPVSNTKPQPRIPEQDGWRQLH*PHILFP
Trigger: AGGAAAGAGAATATGGGGCCAGTGTAGCTGTCGCCA...ACCGTCCTGTTCTGGAATCCTTGGCTGCGGCTTTGTGTTGCTGACCGGGATACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382363.8
3UTR-3UTR CCA 90 bp AATCAAGCCCCACACAGTGTGGCGGTTAAGAACGCAGGCCTTGGGGATCATGCCTCCACTGTCAGGGAATaGGGGATCATCTATATTGGG +
Preference number: 2 (lower is better)
Translates to: NQAPHSVAVKNAGLGDHASTVRE*GIIYIG
Trigger: CCCAATATAGATGATCCCCCATTCCCTGACAGTGGA...GGCATGATCCCCAAGGCCTGCGTTCTTAACCGCCACACTGTGTGGGGCTTGATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000332468.5
3UTR CAA 90 bp GTGACTGCCTCTAGTCACAACAGCCAAACGCAGACACAGGTCTGGTaGTCCCCACAGCCTGTGCTCTTCACTACGTCACATGCTAATTCT +
Preference number: 2 (lower is better)
Translates to: VTASSHNSQTQTQVW*SPQPVLFTTSHANS
Trigger: AGAATTAGCATGTGACGTAGTGAAGAGCACAGGCTGTGGGGACAACCAGACCTGTGTCTGCGTTTGGCTGTTGTGACTAGAGGCAGTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332468.5
3UTR CAA 90 bp GTCAGTGAGGGAACCGAGGTATGTATCCACTTGCACTGTCAGTCATaGAGGGCTACTTCCAGAGAGTTATTCCCCTGGCACTTCCAGCCA +
Preference number: 2 (lower is better)
Translates to: VSEGTEVCIHLHCQS*RATSRELFPWHFQP
Trigger: TGGCTGGAAGTGCCAGGGGAATAACTCTCTGGAAGTAGCCCTCAATGACTGACAGTGCAAGTGGATACATACCTCGGTTCCCTCACTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332468.5
3UTR-3UTR GCA 90 bp TCCCAGAACCCTGGCGACAGCTACACTGGCCCCATATTCTCTTTCCTTATTGACCTGTCCTGTCTATCCTaGTGTCCCATCCTGTCCTGT +
Preference number: 2 (lower is better)
Translates to: SQNPGDSYTGPIFSFLIDLSCLS*CPILSC
Trigger: ACAGGACAGGATGGGACAGCAGGATAGACAGGACAG...GTCAATAAGGAAAGAGAATATGGGGCCAGTGTAGCTGTCGCCAGGGTTCTGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215798.10
ENST00000382363.8
3UTR-3UTR CCA 90 bp GATGACCAAACTGGGTTGCCACCTCCTACCGAGAAAGCGCCTTCTATTTTCCAACCAAGCTCCACTTGTTaGCAGAATTCCGATCCTTGC +
Preference number: 2 (lower is better)
Translates to: DDQTGLPPPTEKAPSIFQPSSTC*QNSDPC
Trigger: GCAAGGATCGGAATTCTGCCAACAAGTGGAGCTTGG...TTGGAAAATAGAAGGCGCTTTCTCGGTAGGAGGTGGCAACCCAGTTTGGTCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332468.5
3UTR-3UTR CCA 90 bp TGTCCCCACAGCCTGTGCTCTTCACTACGTCACATGCTAATTCTTGCTCGACTTACGTCACAGATCACATaGAGAGGCAAGTGCAGTCCA +
Preference number: 2 (lower is better)
Translates to: CPHSLCSSLRHMLILARLTSQIT*RGKCSP
Trigger: TGGACTGCACTTGCCTCTCCATGTGATCTGTGACGT...AAGTCGAGCAAGAATTAGCATGTGACGTAGTGAAGAGCACAGGCTGTGGGGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332468.5
3UTR CAA 90 bp CCTTGCTCCCTGGCTCTGACATCCCTGTGGGACTTTGGAAAAATCTaGCCTACTTTGAACCGCAGTTTCTTCATCTATACAACGGAGGTC +
Preference number: 2 (lower is better)
Translates to: PCSLALTSLWDFGKI*PTLNRSFFIYTTEV
Trigger: GACCTCCGTTGTATAGATGAAGAAACTGCGGTTCAAAGTAGGCAAGATTTTTCCAAAGTCCCACAGGGATGTCAGAGCCAGGGAGCAAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000332468.5
3UTR CCA 72 bp CCCTGCATGTCCGTGGGGCTCACGGTGCGGCGCTTCTaGGACAGCCTGCTGAGGCTGGGCACGCTCCACCAG +
Preference number: 3 (lower is better)
Translates to: PCMSVGLTVRRF*DSLLRLGTLHQ
Trigger: CTGGTGGAGCGTGCCCAGCCTCAGCAGGCTGTCCCAGAAGCGCCGCACCGTGAGCCCCACGGACATGCAGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332468.5
3UTR TCA 72 bp GATGGGCTGCCTCCACTCCACGGGGCACACTGGGCATaGAGGCCGCCGGCCAGGTCCATGGGACCCTCTGAA +
Preference number: 3 (lower is better)
Translates to: DGLPPLHGAHWA*RPPARSMGPSE
Trigger: TTCAGAGGGTCCCATGGACCTGGCCGGCGGCCTTCATGCCCAGTGTGCCCCGTGGAGTGGAGGCAGCCCATC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332468.5
3UTR TCA 72 bp CCGTGGGCCGCTGGGCAGCAGAGCAGAGGAAAGACCTaGCGCGCCTCAGTAAGCATGTGGAGGCCCTCAGGG +
Preference number: 3 (lower is better)
Translates to: PWAAGQQSRGKT*RASVSMWRPSG
Trigger: CCCTGAGGGCCTCCACATGCTTACTGAGGCGCGTCAGGTCTTTCCTCTGCTCTGCTGCCCAGCGGCCCACGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332468.5
3UTR GCA 72 bp TGGGAGCACGACAAACAGCAGCTGCTCACAGGTCTGTaGCCCAGAGGCCAGACGCCTGGTGCCCAGGGGCTC +
Preference number: 3 (lower is better)
Translates to: WEHDKQQLLTGL*PRGQTPGAQGL
Trigger: GAGCCCCTGGGCACCAGGCGTCTGGCCTCTGGGGCACAGACCTGTGAGCAGCTGCTGTTTGTCGTGCTCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332468.5
3UTR GCA 72 bp GGAGTGTCCACTCCCAGACCATTGAGACGGCCCTGGTaGCCTGTGACGCATGCGCCAGCGTCCAGGGAAGCC +
Preference number: 3 (lower is better)
Translates to: GVSTPRPLRRPW*PVTHAPASREA
Trigger: GGCTTCCCTGGACGCTGGCGCATGCGTCACAGGGCACCAGGGCCGTCTCAATGGTCTGGGAGTGGACACTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332468.5
3UTR GCA 72 bp GTCCTCTCACGGCTCCTAGAGGCCGTCCACCTTCCTTaGCATGGGGCTCCCTCCATCGGGGTGCAGGCAGGA +
Preference number: 3 (lower is better)
Translates to: VLSRLLEAVHLP*HGAPSIGVQAG
Trigger: TCCTGCCTGCACCCCGATGGAGGGAGCCCCATGGCAAGGAAGGTGGACGGCCTCTAGGAGCCGTGAGAGGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000631046.2
3UTR CCA 72 bp ACAGGCCCACCGAGACCCAGATCCATGGTAGGGGACTaGGGATGGTGCCAAGGGCATGCTGGGGCTCAGGGC +
Preference number: 3 (lower is better)
Translates to: TGPPRPRSMVGD*GWCQGHAGAQG
Trigger: GCCCTGAGCCCCAGCATGCCCTTGGCACCATCCCCAGTCCCCTACCATGGATCTGGGTCTCGGTGGGCCTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332468.5
3UTR CCA 72 bp GCGCTGGCCAGCAGGTCTGCTGGGCCAGCACGGAGCTaGATAAGGAGAAGGCCCGTGTCGACAGCATGGTCC +
Preference number: 3 (lower is better)
Translates to: ALASRSAGPARS*IRRRPVSTAWS
Trigger: GGACCATGCTGTCGACACGGGCCTTCTCCTTATCCAGCTCCGTGCTGGCCCAGCAGACCTGCTGGCCAGCGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332468.5
3UTR CCA 72 bp CTCACGGCTCCTAGAGGCCGTCCACCTTCCTTGCCATaGGGCTCCCTCCATCGGGGTGCAGGCAGGAAGGGT +
Preference number: 3 (lower is better)
Translates to: LTAPRGRPPSLP*GSLHRGAGRKG
Trigger: ACCCTTCCTGCCTGCACCCCGATGGAGGGAGCCCCATGGCAAGGAAGGTGGACGGCCTCTAGGAGCCGTGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000631046.2
3UTR TCA 72 bp CCAAGGGCCGGGGTCTTCAAGCTGGGATCCTGGCCTTaGCCAGGTCCGGTGTGCATCTGCCTGCTGCCAGCT +
Preference number: 3 (lower is better)
Translates to: PRAGVFKLGSWP*PGPVCICLLPA
Trigger: AGCTGGCAGCAGGCAGATGCACACCGGACCTGGTCAAGGCCAGGATCCCAGCTTGAAGACCCCGGCCCTTGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332468.5
3UTR CCA 72 bp CCAGGAGTGTCCACTCCCAGACCATTGAGACGGCCCTaGTGCCCTGTGACGCATGCGCCAGCGTCCAGGGAA +
Preference number: 3 (lower is better)
Translates to: PGVSTPRPLRRP*CPVTHAPASRE
Trigger: TTCCCTGGACGCTGGCGCATGCGTCACAGGGCACCAGGGCCGTCTCAATGGTCTGGGAGTGGACACTCCTGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332468.5
3UTR TCA 72 bp GGGAGGGCAGCAAGGAAGGGGGTGTTCATCCGGTGGTaGCACTGTGATCTCAGTCCCACTGGGGCCACCAGG +
Preference number: 3 (lower is better)
Translates to: GRAARKGVFIRW*HCDLSPTGATR
Trigger: CCTGGTGGCCCCAGTGGGACTGAGATCACAGTGTCACCACCGGATGAACACCCCCTTCCTTGCTGCCCTCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000332468.5
3UTR CCA 72 bp CTTGCGGCTGTGGGACTGAGGTCCCCATGTCCTCGCTaGCTGGCTGTAAGCCAGGTCCTCTCACGGCTCCTA +
Preference number: 3 (lower is better)
Translates to: LAAVGLRSPCPR*LAVSQVLSRLL
Trigger: TAGGAGCCGTGAGAGGACCTGGCTTACAGCCAGCCAGCGAGGACATGGGGACCTCAGTCCCACAGCCGCAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332468.5
ENST00000630264.1
ENST00000631046.2
3UTR CCA 72 bp GGTGTTAAAGCCAGGCGGCCAGCAGCGCAGCCCCTGTaGACCCACCACAGCACGCAAGTGCTTCATGCGTCA +
Preference number: 3 (lower is better)
Translates to: GVKARRPAAQPL*THHSTQVLHAS
Trigger: TGACGCATGAAGCACTTGCGTGCTGTGGTGGGTCCACAGGGGCTGCGCTGCTGGCCGCCTGGCTTTAACACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332468.5
3UTR CCA 72 bp TCAGGTGGGTCAGCCTCAGCCTCTATCTCCCCACTGTaGTGGCCTTCACACCTCGCCCCAGCTCTGGCTTCC +
Preference number: 3 (lower is better)
Translates to: SGGSASASISPL*WPSHLAPALAS
Trigger: GGAAGCCAGAGCTGGGGCGAGGTGTGAAGGCCACCACAGTGGGGAGATAGAGGCTGAGGCTGACCCACCTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332468.5
3UTR CCA 72 bp CTGAGGCAAGGCCAGGCCTGGCTTCACAGAGCTCCCTaGTCCAGTGGAGAAGAGCCAGGCAGAAGTGCCACC +
Preference number: 3 (lower is better)
Translates to: LRQGQAWLHRAP*SSGEEPGRSAT
Trigger: GGTGGCACTTCTGCCTGGCTCTTCTCCACTGGACCAGGGAGCTCTGTGAAGCCAGGCCTGGCCTTGCCTCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332468.5
3UTR-3UTR CAA 90 bp GAAAGGGGCAAACCAAAGGGAGACTCCCACCTCCAAGCCCACCACCAAGGGCGACTCTGCCCCGGGAACTaGTGGAGAGCCCACCTCATC +
Preference number: 3 (lower is better)
Translates to: ERGKPKGDSHLQAHHQGRLCPGN*WRAHLI
Trigger: GATGAGGTGGGCTCTCCACAAGTTCCCGGGGCAGAG...TCGCCCTTGGTGGTGGGCTTGGAGGTGGGAGTCTCCCTTTGGTTTGCCCCTTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332468.5
3UTR TCA 72 bp AGCAAGGAAGGGGGTGTTCATCCGGTGGTGACACTGTaGTCTCAGTCCCACTGGGGCCACCAGGAGCTGGGC +
Preference number: 3 (lower is better)
Translates to: SKEGGVHPVVTL*SQSHWGHQELG
Trigger: GCCCAGCTCCTGGTGGCCCCAGTGGGACTGAGATCACAGTGTCACCACCGGATGAACACCCCCTTCCTTGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000332468.5
3UTR GCA 72 bp AGGGCCCTCGCTAGCCTGGGCATCTGCAATGTAGGCTaGAGGGAAAGAGGGCTCCACTGTCAGGGAATGGGG +
Preference number: 3 (lower is better)
Translates to: RALASLGICNVG*RERGLHCQGMG
Trigger: CCCCATTCCCTGACAGTGGAGCCCTCTTTCCCTGCAGCCTACATTGCAGATGCCCAGGCTAGCGAGGGCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332468.5
3UTR CCA 72 bp GGACATGGTGGGGCCCTCATCCTTCCTCCCACCCACTaGGCTTGCTGTCCTGTCTATCCTGCTGTCCCATCC +
Preference number: 3 (lower is better)
Translates to: GHGGALILPPTH*ACCPVYPAVPS
Trigger: GGATGGGACAGCAGGATAGACAGGACAGCAAGCCCAGTGGGTGGGAGGAAGGATGAGGGCCCCACCATGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215798.10
ENST00000382363.8
3UTR CCA 72 bp CAGCCATCTGCGTTCCAAGGGCCGGGGTCTTCAAGCTaGGATCCTGGCCTTGACCAGGTCCGGTGTGCATCT +
Preference number: 3 (lower is better)
Translates to: QPSAFQGPGSSS*DPGLDQVRCAS
Trigger: AGATGCACACCGGACCTGGTCAAGGCCAGGATCCCAGCTTGAAGACCCCGGCCCTTGGAACGCAGATGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332468.5
3UTR CCA 72 bp CGCCTGGTGCCCAGGGGCTCTGCCACAGCCTTTGCATaGATGTTTGTGAGACAGGGCTTCCAGGGCAAGTGG +
Preference number: 3 (lower is better)
Translates to: RLVPRGSATAFA*MFVRQGFQGKW
Trigger: CCACTTGCCCTGGAAGCCCTGTCTCACAAACATCCATGCAAAGGCTGTGGCAGAGCCCCTGGGCACCAGGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332468.5
3UTR CCA 72 bp CCAGCGTCCAGGGAAGCCTGCAGAAGGTGGGCAAGGTaGTCATCAGCCTGTGTCAGAGCCAGAACCTGCCCT +
Preference number: 3 (lower is better)
Translates to: PASREACRRWAR*SSACVRARTCP
Trigger: AGGGCAGGTTCTGGCTCTGACACAGGCTGATGACCACCTTGCCCACCTTCTGCAGGCTTCCCTGGACGCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332468.5
3UTR TCA 72 bp TGGGGGAACAGTGACCCAGGGACTGATACTGCCCAGTaGGGCCTCACTCTGGAAGAGCGCCCCACAGGCAAA +
Preference number: 3 (lower is better)
Translates to: WGNSDPGTDTAQ*GLTLEERPTGK
Trigger: TTTGCCTGTGGGGCGCTCTTCCAGAGTGAGGCCTCACTGGGCAGTATCAGTCCCTGGGTCACTGTTCCCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000332468.5
3UTR GCA 72 bp GGGTCCTACAGGAGGAGAACGGGCGGCTCCAATCAATaGTGTCCAAAATCCGGGAAGTGGCCCAGCAGGGTG +
Preference number: 3 (lower is better)
Translates to: GSYRRRTGGSNQ*CPKSGKWPSRV
Trigger: CACCCTGCTGGGCCACTTCCCGGATTTTGGACAGCATTGATTGGAGCCGCCCGTTCTCCTCCTGTAGGACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332468.5
3UTR GCA 72 bp CAGCGCAGCCCCTGTGGACCCACCACAGCACGCAAGTaGTTCATGCGTCATCCACTCTGCATAGACAGGGAC +
Preference number: 3 (lower is better)
Translates to: QRSPCGPTTARK*FMRHPLCIDRD
Trigger: GTCCCTGTCTATGCAGAGTGGATGACGCATGAAGCACTTGCGTGCTGTGGTGGGTCCACAGGGGCTGCGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332468.5
3UTR GCA 72 bp AGGTGTGCCACACTCTCCTGCCAGATGGCTAAGGGGTaGAGGGAGGGATGGCCACATCTGCCATGGGAATCC +
Preference number: 3 (lower is better)
Translates to: RCATLSCQMAKG*REGWPHLPWES
Trigger: GGATTCCCATGGCAGATGTGGCCATCCCTCCCTGCACCCCTTAGCCATCTGGCAGGAGAGTGTGGCACACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332468.5
3UTR CCA 72 bp GACACAGCCTCCAGCTGCCCACTGTCCTGGACCCCATaGCATAGGAGTGCTAGGTACCCATCTTGGCACAGG +
Preference number: 3 (lower is better)
Translates to: DTASSCPLSWTP*HRSARYPSWHR
Trigger: CCTGTGCCAAGATGGGTACCTAGCACTCCTATGCCATGGGGTCCAGGACAGTGGGCAGCTGGAGGCTGTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332468.5
3UTR-3UTR CAA 90 bp AAGTTCCTGGCACCAGAAGATGGCCAGTGCCCACTGATGGGAGGCCTGAGGGATCTGCCGTTCCCAAGCTaGAGCTGGCCGTGTGACCTT +
Preference number: 3 (lower is better)
Translates to: KFLAPEDGQCPLMGGLRDLPFPS*SWPCDL
Trigger: AAGGTCACACGGCCAGCTCAAGCTTGGGAACGGCAG...ATCCCTCAGGCCTCCCATCAGTGGGCACTGGCCATCTTCTGGTGCCAGGAACTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332468.5
3UTR TCA 72 bp AGAGCAGCCTGGCGGAATTCCTGCCGTTCCCAAGCTTaGGCTGGCCGTGTGACCTTGGACAGCTCACTTTGG +
Preference number: 3 (lower is better)
Translates to: RAAWRNSCRSQA*AGRVTLDSSLW
Trigger: CCAAAGTGAGCTGTCCAAGGTCACACGGCCAGCTCAAGCTTGGGAACGGCAGGAATTCCGCCAGGCTGCTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332468.5
3UTR GCA 72 bp CCACCTTCCTTGCCATGGGGCTCCCTCCATTGGGCTTaGTGTCCTGTCTATCCTGCTGTCCCATCCTGTCCT +
Preference number: 3 (lower is better)
Translates to: PPSLPWGSLHWA*CPVYPAVPSCP
Trigger: AGGACAGGATGGGACAGCAGGATAGACAGGACAGCAAGCCCAATGGAGGGAGCCCCATGGCAAGGAAGGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332468.5
ENST00000630264.1
3UTR GCA 72 bp GAGGAAGCCCCTATCCAGCAGCAGGTCTTCAGACTCTaGCCCGGGAACTTGTGGAGAGCCCACCTCATCACA +
Preference number: 3 (lower is better)
Translates to: EEAPIQQQVFRL*PGNLWRAHLIT
Trigger: TGTGATGAGGTGGGCTCTCCACAAGTTCCCGGGGCAGAGTCTGAAGACCTGCTGCTGGATAGGGGCTTCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332468.5
3UTR CCA 72 bp ACCCAGGGACTGATACTGCCCAGTGAGGCCTCACTCTaGAAGAGCGCCCCACAGGCAAAGATGAGCAGGTGT +
Preference number: 3 (lower is better)
Translates to: TQGLILPSEASL*KSAPQAKMSRC
Trigger: ACACCTGCTCATCTTTGCCTGTGGGGCGCTCTTCCAGAGTGAGGCCTCACTGGGCAGTATCAGTCCCTGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332468.5
3UTR-3UTR CAA 90 bp AGACAGGCCACAGGGAGCTCCCAGAACCCTGGCGACAGCTACACTGGCCCCATAACTCACGTCACAGGATaGCAGAGAAGGTCCCAAAGT +
Preference number: 3 (lower is better)
Translates to: RQATGSSQNPGDSYTGPITHVTG*QRRSQS
Trigger: ACTTTGGGACCTTCTCTGCAATCCTGTGACGTGAGT...TATGGGGCCAGTGTAGCTGTCGCCAGGGTTCTGGGAGCTCCCTGTGGCCTGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215798.10
ENST00000382363.8
3UTR-3UTR CAA 90 bp CTCAGGCGCCCACCAACTCCGTGCCATGTATTCATTAGCTCCCAGTTCTGGCAGATGGGGCTCCCTCCATaGGGCTTGCTGTCCTGTCTA +
Preference number: 3 (lower is better)
Translates to: LRRPPTPCHVFISSQFWQMGLPP*GLLSCL
Trigger: TAGACAGGACAGCAAGCCCAATGGAGGGAGCCCCAT...CTGCCAGAACTGGGAGCTAATGAATACATGGCACGGAGTTGGTGGGCGCCTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332468.5
ENST00000630264.1
3UTR-3UTR CAA 90 bp CTCCCTGCTCTGCCCTATCAATGTGTGTCTGTGGGCAAGCTCTTCCCCTCTCTGGTCCCATGTCTTTTCTaGGGTAGGGACGGTGCCCCA +
Preference number: 3 (lower is better)
Translates to: LPALPYQCVSVGKLFPSLVPCLF*GRDGAP
Trigger: TGGGGCACCGTCCCTACCCAAGAAAAGACATGGGAC...CAGAGAGGGGAAGAGCTTGCCCACAGACACACATTGATAGGGCAGAGCAGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000332468.5
3UTR-3UTR CAA 90 bp AATCAAGCCCCACACAGTGTGGCGGTTAAGAACGCAGGCCTTGGGGATCATGCCGCATCCAGGGCAAAGTaGAAGGGAACCAGCCACAGG +
Preference number: 3 (lower is better)
Translates to: NQAPHSVAVKNAGLGDHAASRAK*KGTSHR
Trigger: CCTGTGGCTGGTTCCCTTCAACTTTGCCCTGGATGC...GGCATGATCCCCAAGGCCTGCGTTCTTAACCGCCACACTGTGTGGGGCTTGATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332468.5
3UTR TCA 72 bp GGAATTCCTGCCGTTCCCAAGCTTGAGCTGGCCGTGTaGCCTTGGACAGCTCACTTTGGCTGTAGCCTGTCC +
Preference number: 3 (lower is better)
Translates to: GIPAVPKLELAV*PWTAHFGCSLS
Trigger: GGACAGGCTACAGCCAAAGTGAGCTGTCCAAGGTCACACGGCCAGCTCAAGCTTGGGAACGGCAGGAATTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332468.5
3UTR TCA 72 bp AAACTGTCACAGCCGCCATGTATCAGGTGTCTGCTGTaGCCCAGGCTTCAGGCGCCGCAGCCTCTGATGCTT +
Preference number: 3 (lower is better)
Translates to: KLSQPPCIRCLL*PRLQAPQPLML
Trigger: AAGCATCAGAGGCTGCGGCGCCTGAAGCCTGGGTCACAGCAGACACCTGATACATGGCGGCTGTGACAGTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332468.5
3UTR TCA 72 bp CAGGAGGGTGGGCCTGACCAACCACACTATTGGCGATaGCCAAACTGGGTTGCCACCTCCTACCGAGAAAGC +
Preference number: 3 (lower is better)
Translates to: QEGGPDQPHYWR*PNWVATSYRES
Trigger: GCTTTCTCGGTAGGAGGTGGCAACCCAGTTTGGTCATCGCCAATAGTGTGGTTGGTCAGGCCCACCCTCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332468.5
3UTR GCA 72 bp CTTCCAAGCTCCACTTGTTGGCAGAATTCCGATCCTTaGGGCTGTGGGACTGAGGTCCCCATGTCCTCGCTG +
Preference number: 3 (lower is better)
Translates to: LPSSTCWQNSDP*GCGTEVPMSSL
Trigger: CAGCGAGGACATGGGGACCTCAGTCCCACAGCCGCAAGGATCGGAATTCTGCCAACAAGTGGAGCTTGGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332468.5
ENST00000421022.1
ENST00000630264.1
ENST00000631046.2
3UTR GCA 72 bp GTCCCATATGCCCTCTATAGCTGTCATTCCTTTAAGTaGAGCAAGAAGCCTCGTCAGGCCGGGTGCGGCGGC +
Preference number: 3 (lower is better)
Translates to: VPYALYSCHSFK*SKKPRQAGCGG
Trigger: GCCGCCGCACCCGGCCTGACGAGGCTTCTTGCTGCACTTAAAGGAATGACAGCTATAGAGGGCATATGGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332468.5
3UTR CCA 72 bp TTCCTAGCCTACCACTATGTGCACCACAGCCTTTACTaGCTCCCACCGCCCTCCCAATCAAGCCCCACACAG +
Preference number: 3 (lower is better)
Translates to: FLAYHYVHHSLY*LPPPSQSSPTQ
Trigger: CTGTGTGGGGCTTGATTGGGAGGGCGGTGGGAGCCAGTAAAGGCTGTGGTGCACATAGTGGTAGGCTAGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332468.5
3UTR-3UTR CAA 90 bp GGCAGACTCACGTCACAGGATTGCAGAGAAGGTCCCAAAGTGACCTCTCTTCCTTCCCACCCACTGGGCTaGCTGTCCTGTCTATCCTGC +
Preference number: 3 (lower is better)
Translates to: GRLTSQDCREGPKVTSLPSHPLG*LSCLSC
Trigger: GCAGGATAGACAGGACAGCAAGCCCAGTGGGTGGGA...AGGAAGAGAGGTCACTTTGGGACCTTCTCTGCAATCCTGTGACGTGAGTCTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000215798.10
ENST00000382363.8
3UTR-3UTR CAA 90 bp ACAAAGTTCCTGGCACCAGAAGATGGCCAGTGCCCACTGATGGGAGGCCTGAGGGGTTCTGGGGAAGAATaGGCTTCCAAGCTCCACTTG +
Preference number: 3 (lower is better)
Translates to: TKFLAPEDGQCPLMGGLRGSGEE*ASKLHL
Trigger: CAAGTGGAGCTTGGAAGCCAATTCTTCCCCAGAACC...CCTCAGGCCTCCCATCAGTGGGCACTGGCCATCTTCTGGTGCCAGGAACTTTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332468.5
3UTR-3UTR CAA 90 bp CTCCCTGCTCTGCCCTATCAATGTGTGTCTGTGGGCAAGCTCTTCCCCTCTCTGCTCGAGCCCAGGAGTTaGAGACCAGCCTGGACAATA +
Preference number: 3 (lower is better)
Translates to: LPALPYQCVSVGKLFPSLLEPRS*RPAWTI
Trigger: TATTGTCCAGGCTGGTCTCAAACTCCTGGGCTCGAG...CAGAGAGGGGAAGAGCTTGCCCACAGACACACATTGATAGGGCAGAGCAGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332468.5
3UTR TCA 72 bp CAAGCCCACCACCAAGGGCGAGCCAGCCAGGAGCCCTaGATATCTGACTACCAAGTTAATCAAGCCCTCCTC +
Preference number: 3 (lower is better)
Translates to: QAHHQGRASQEP*ISDYQVNQALL
Trigger: GAGGAGGGCTTGATTAACTTGGTAGTCAGATATTCAGGGCTCCTGGCTGGCTCGCCCTTGGTGGTGGGCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332468.5
3UTR GCA 72 bp ACTCTGGCAACGTCACAGATCACATGGAGAGGCAAGTaGAGTCCAACGACATCCGCATCCGGGTCCTACAGG +
Preference number: 3 (lower is better)
Translates to: TLATSQITWRGK*SPTTSASGSYR
Trigger: CCTGTAGGACCCGGATGCGGATGTCGTTGGACTGCACTTGCCTCTCCATGTGATCTGTGACGTTGCCAGAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332468.5
3UTR GCA 72 bp CCTGAGGGATTTGCCCTTTCTGAGCCTCATCACAGTTaGCTCCATGGACGACACCAAGGCCCAGAGAGGTGT +
Preference number: 3 (lower is better)
Translates to: PEGFALSEPHHS*LHGRHQGPERC
Trigger: ACACCTCTCTGGGCCTTGGTGTCGTCCATGGAGGCAACTGTGATGAGGCTCAGAAAGGGCAAATCCCTCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332468.5
3UTR CCA 72 bp ACTGAACCAGAAGGGGCAGCAATTCTCCCGGGCTCCTaGAGCCAGAAGGAAGCATCCATCACAAAAGCAGGG +
Preference number: 3 (lower is better)
Translates to: TEPEGAAILPGS*SQKEASITKAG
Trigger: CCCTGCTTTTGTGATGGATGCTTCCTTCTGGCTCCAGGAGCCCGGGAGAATTGCTGCCCCTTCTGGTTCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332468.5
3UTR CCA 72 bp CCCCATTTTGTGGCTGAGGACTCTGAGGCCCAGAGATaGGATGTGAGCTCCCGTCCTAGGTCTGAGGTAGTA +
Preference number: 3 (lower is better)
Translates to: PHFVAEDSEAQR*DVSSRPRSEVV
Trigger: TACTACCTCAGACCTAGGACGGGAGCTCACATCCCATCTCTGGGCCTCAGAGTCCTCAGCCACAAAATGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332468.5
3UTR TCA 72 bp CCCCGTTTCTGTGAAGGACAATCTCCAAAAACTTGCTaGGGCCTTCTCAGGGCGCACGCTCCCAAATGCCTG +
Preference number: 3 (lower is better)
Translates to: PRFCEGQSPKTC*GLLRAHAPKCL
Trigger: CAGGCATTTGGGAGCGTGCGCCCTGAGAAGGCCTCAGCAAGTTTTTGGAGATTGTCCTTCACAGAAACGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000332468.5
3UTR TCA 72 bp GCAGAGCTGGCAGGAAGATGTGCAGTTAGCTGCTCGTaGGACATCATCCAGGCCCTTCTGTCCCCTTCTCAA +
Preference number: 3 (lower is better)
Translates to: AELAGRCAVSCS*DIIQALLSPSQ
Trigger: TTGAGAAGGGGACAGAAGGGCCTGGATGATGTCTCACGAGCAGCTAACTGCACATCTTCCTGCCAGCTCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332468.5
3UTR TCA 72 bp CTAGGTACCCATCTTGGCACAGGATTGGATATCAGGTaGCCTGGGTTCTCCCAGCCCCTCCAGACCCCTAAA +
Preference number: 3 (lower is better)
Translates to: LGTHLGTGLDIR*PGFSQPLQTPK
Trigger: TTTAGGGGTCTGGAGGGGCTGGGAGAACCCAGGTCACCTGATATCCAATCCTGTGCCAAGATGGGTACCTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332468.5
3UTR GCA 72 bp CAGCTGAGTAGCTCTCTCAGGCGCCCACCAACTCCGTaGCATGTATTCATTAGCTCCCAGTTCTGGCAGTCA +
Preference number: 3 (lower is better)
Translates to: QLSSSLRRPPTP*HVFISSQFWQS
Trigger: TGACTGCCAGAACTGGGAGCTAATGAATACATGGCACGGAGTTGGTGGGCGCCTGAGAGAGCTACTCAGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332468.5
3UTR GCA 72 bp CTTTTTGCCAGAGAAGTCTCCGGCCAACTGAGTGCCTaGAGGCCTGTCCCATGTCTTTTCTTGGGTAGGGAC +
Preference number: 3 (lower is better)
Translates to: LFAREVSGQLSA*RPVPCLFLGRD
Trigger: GTCCCTACCCAAGAAAAGACATGGGACAGGCCTGCAGGCACTCAGTTGGCCGGAGACTTCTCTGGCAAAAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000332468.5
3UTR GCA 72 bp CTGTCAGGGAATGGGGGATCATCTATATTGGGCATCTaGTCCCTGAGATGCCTCCAGGTGTGGGGGTTGACT +
Preference number: 3 (lower is better)
Translates to: LSGNGGSSILGI*SLRCLQVWGLT
Trigger: AGTCAACCCCCACACCTGGAGGCATCTCAGGGAGCAGATGCCCAATATAGATGATCCCCCATTCCCTGACAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000332468.5
3UTR CCA 72 bp CATGTCCCACAGACTCTGGCAACGTCACAGATCACATaGAGAGGCAAGTGCAGTCCAACGACATCCGCATCC +
Preference number: 3 (lower is better)
Translates to: HVPQTLATSQIT*RGKCSPTTSAS
Trigger: GGATGCGGATGTCGTTGGACTGCACTTGCCTCTCCATGTGATCTGTGACGTTGCCAGAGTCTGTGGGACATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332468.5
3UTR-3UTR CAA 90 bp CTCAGGTGGGTCAGCCTCAGCCTCTATCTCCCCACTGTGGTGGCCTTCACACCTCATCCCTGTGGGACTTaGGAAAAATCTTGCCTACTT +
Preference number: 3 (lower is better)
Translates to: LRWVSLSLYLPTVVAFTPHPCGT*EKSCLL
Trigger: AAGTAGGCAAGATTTTTCCAAAGTCCCACAGGGATG...AGGTGTGAAGGCCACCACAGTGGGGAGATAGAGGCTGAGGCTGACCCACCTGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000332468.5
3UTR GCA 72 bp CCTTTCTACCCCAAGTGGGTGCTGTTCTCTGTGCCTTaGAAACTGTCACAGCCGCCATGTATCAGGTGTCTG +
Preference number: 3 (lower is better)
Translates to: PFYPKWVLFSVP*KLSQPPCIRCL
Trigger: CAGACACCTGATACATGGCGGCTGTGACAGTTTGCAAGGCACAGAGAACAGCACCCACTTGGGGTAGAAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332468.5
3UTR CCA 72 bp ATATTGGGCATCTGCTCCCTGAGATGCCTCCAGGTGTaGGGGTTGACTCACCTTTACAGAGAGTCTACCCTG +
Preference number: 3 (lower is better)
Translates to: ILGICSLRCLQV*GLTHLYRESTL
Trigger: CAGGGTAGACTCTCTGTAAAGGTGAGTCAACCCCCACACCTGGAGGCATCTCAGGGAGCAGATGCCCAATAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332468.5
3UTR CCA 72 bp TCCCCTGGCACTTCCAGCCAAGCAGAGCAGCCTCTCTaGTTGTGGCAAAAGCCATTAGAGACAAAGTTCCTG +
Preference number: 3 (lower is better)
Translates to: SPGTSSQAEQPL*LWQKPLETKFL
Trigger: CAGGAACTTTGTCTCTAATGGCTTTTGCCACAACCAGAGAGGCTGCTCTGCTTGGCTGGAAGTGCCAGGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332468.5
3UTR CCA 72 bp CAGTCATTGAGGGCTACTTCCAGAGAGTTATTCCCCTaGCACTTCCAGCCAAGCAGAGCAGCCTCTCTGGTT +
Preference number: 3 (lower is better)
Translates to: QSLRATSRELFP*HFQPSRAASLV
Trigger: AACCAGAGAGGCTGCTCTGCTTGGCTGGAAGTGCCAGGGGAATAACTCTCTGGAAGTAGCCCTCAATGACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332468.5
3UTR CCA 72 bp AGAGCATATTCTGAGACTCTCCAAGCTCTTGATGCCTaGGCCAGTTCCCCAGAGCCAGAGCTGCGGTTGTAT +
Preference number: 3 (lower is better)
Translates to: RAYSETLQALDA*ASSPEPELRLY
Trigger: ATACAACCGCAGCTCTGGCTCTGGGGAACTGGCCCAGGCATCAAGAGCTTGGAGAGTCTCAGAATATGCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332468.5
3UTR-3UTR CAA 90 bp ATCATCCAGGCCCTTCTGTCCCCTTCTCAACCACCTTGTGAGGCAGGTCATAGCACAATCTCCAAAAACTaGCTGAGGCCTTCTCAGGGC +
Preference number: 3 (lower is better)
Translates to: IIQALLSPSQPPCEAGHSTISKN*LRPSQG
Trigger: GCCCTGAGAAGGCCTCAGCAAGTTTTTGGAGATTGT...GCTATGACCTGCCTCACAAGGTGGTTGAGAAGGGGACAGAAGGGCCTGGATGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000332468.5
3UTR TCA 72 bp CTGCATAGACAGGGACGTGAAAGCCCAACAGTGATGTaGCTGCCTCTAGTCACAACAGCCAAACGCAGACAC +
Preference number: 3 (lower is better)
Translates to: LHRQGRESPTVM*LPLVTTAKRRH
Trigger: GTGTCTGCGTTTGGCTGTTGTGACTAGAGGCAGTCACATCACTGTTGGGCTTTCACGTCCCTGTCTATGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332468.5
3UTR TCA 72 bp TGCGGGCCGCAGAGAGGAGACCTGGCTGTAGTAAGCTaGGTCAGAGTAACAGAGGGAGAAAGTTCTCTCTTA +
Preference number: 3 (lower is better)
Translates to: CGPQRGDLAVVS*VRVTEGESSLL
Trigger: TAAGAGAGAACTTTCTCCCTCTGTTACTCTGACTCAGCTTACTACAGCCAGGTCTCCTCTCTGCGGCCCGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332468.5
3UTR CCA 72 bp CAGCGTGGAATCCCAGATAACATGTCCCACAGACTCTaGCAACGTCACAGATCACATGGAGAGGCAAGTGCA +
Preference number: 3 (lower is better)
Translates to: QRGIPDNMSHRL*QRHRSHGEASA
Trigger: TGCACTTGCCTCTCCATGTGATCTGTGACGTTGCCAGAGTCTGTGGGACATGTTATCTGGGATTCCACGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332468.5
3UTR CCA 72 bp AAAGCCATTAGAGACAAAGTTCCTGGCACCAGAAGATaGCCAGTGCCCACTGATGGGAGGCCTGAGGGATTT +
Preference number: 3 (lower is better)
Translates to: KAIRDKVPGTRR*PVPTDGRPEGF
Trigger: AAATCCCTCAGGCCTCCCATCAGTGGGCACTGGCCATCTTCTGGTGCCAGGAACTTTGTCTCTAATGGCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332468.5
3UTR CCA 72 bp GGGATCATGCCTTGCTCCCTGGCTCTGACATCCCTGTaGGACTTTGGAAAAATCTTGCCTACTTTGAACCGC +
Preference number: 3 (lower is better)
Translates to: GIMPCSLALTSL*DFGKILPTLNR
Trigger: GCGGTTCAAAGTAGGCAAGATTTTTCCAAAGTCCCACAGGGATGTCAGAGCCAGGGAGCAAGGCATGATCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000332468.5
3UTR-3UTR CAA 90 bp GAGCTCCCAGAACCCTGGCGACAGCTACACTGGCCCCATATTCTCTTTCCTTATACTCACGTCACAGGATaGCAGAGAAGGTCCCAAAGT +
Preference number: 3 (lower is better)
Translates to: ELPEPWRQLHWPHILFPYTHVTG*QRRSQS
Trigger: ACTTTGGGACCTTCTCTGCAATCCTGTGACGTGAGT...ATAAGGAAAGAGAATATGGGGCCAGTGTAGCTGTCGCCAGGGTTCTGGGAGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215798.10
ENST00000382363.8
3UTR-3UTR CAA 90 bp TGTCCCCACAGCCTGTGCTCTTCACTACGTCACATGCTAATTCTTGCTCGACTTTGTGTGTCCCCCTTCTaGGTTCTTGGAATGGGTCCC +
Preference number: 3 (lower is better)
Translates to: CPHSLCSSLRHMLILARLCVSPF*VLGMGP
Trigger: GGGACCCATTCCAAGAACCAAGAAGGGGGACACACA...AAGTCGAGCAAGAATTAGCATGTGACGTAGTGAAGAGCACAGGCTGTGGGGACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000332468.5
3UTR-3UTR CAA 90 bp GATGACCAAACTGGGTTGCCACCTCCTACCGAGAAAGCGCCTTCTATTTTCCAACTGAAGCATTTTCCCTaGGTGAAGAGGCCGTCAGGT +
Preference number: 3 (lower is better)
Translates to: DDQTGLPPPTEKAPSIFQLKHFP*VKRPSG
Trigger: ACCTGACGGCCTCTTCACCAAGGGAAAATGCTTCAG...TTGGAAAATAGAAGGCGCTTTCTCGGTAGGAGGTGGCAACCCAGTTTGGTCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332468.5
3UTR-3UTR CAA 90 bp GATGACCAAACTGGGTTGCCACCTCCTACCGAGAAAGCGCCTTCTATTTTCCAAGCCTTGCTAAGTCTTTaGAGAGCTCTAGGTCCCACC +
Preference number: 3 (lower is better)
Translates to: DDQTGLPPPTEKAPSIFQALLSL*RALGPT
Trigger: GGTGGGACCTAGAGCTCTCAAAAGACTTAGCAAGGC...TTGGAAAATAGAAGGCGCTTTCTCGGTAGGAGGTGGCAACCCAGTTTGGTCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332468.5
3UTR CCA 72 bp ACCCCTAAAGCACTAGGGCAAATCCTTTTGCAGAGCTaGCAGGAAGATGTGCAGTTAGCTGCTCGTGAGACA +
Preference number: 3 (lower is better)
Translates to: TPKALGQILLQS*QEDVQLAARET
Trigger: TGTCTCACGAGCAGCTAACTGCACATCTTCCTGCCAGCTCTGCAAAAGGATTTGCCCTAGTGCTTTAGGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332468.5
3UTR CCA 72 bp GTTATGGGCTATCCCGTAATCCACACAACCACCCACTaGGGAAGAACCACTGTTCCCATGATGGGAAGGAAA +
Preference number: 3 (lower is better)
Translates to: VMGYPVIHTTTH*GRTTVPMMGRK
Trigger: TTTCCTTCCCATCATGGGAACAGTGGTTCTTCCCCAGTGGGTGGTTGTGTGGATTACGGGATAGCCCATAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332468.5
3UTR TCA 72 bp GAACCGAGGTATGTATCCACTTGCACTGTCAGTCATTaGGGGCTACTTCCAGAGAGTTATTCCCCTGGCACT +
Preference number: 3 (lower is better)
Translates to: EPRYVSTCTVSH*GLLPESYSPGT
Trigger: AGTGCCAGGGGAATAACTCTCTGGAAGTAGCCCTCAATGACTGACAGTGCAAGTGGATACATACCTCGGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332468.5
3UTR TCA 72 bp CTTATTCACGTCGGTGTCAGAGAACATTTGAGGGTCTaGGTGTCAGGCAAGGCTGTCACACTGTCACAGAAC +
Preference number: 3 (lower is better)
Translates to: LIHVGVREHLRV*VSGKAVTLSQN
Trigger: GTTCTGTGACAGTGTGACAGCCTTGCCTGACACTCAGACCCTCAAATGTTCTCTGACACCGACGTGAATAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332468.5
3UTR GCA 72 bp CAGCCTGTGCTCTTCACTACGTCACATGCTAATTCTTaGTCGACTTCTGTGTGTCCCCCTTCTTGGTTCTTG +
Preference number: 3 (lower is better)
Translates to: QPVLFTTSHANS*STSVCPPSWFL
Trigger: CAAGAACCAAGAAGGGGGACACACAGAAGTCGAGCAAGAATTAGCATGTGACGTAGTGAAGAGCACAGGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000332468.5
3UTR CCA 72 bp GCCTTGCTCCCTGGCTCTGACATCCCTGTGGGACTTTaGAAAAATCTTGCCTACTTTGAACCGCAGTTTCTT +
Preference number: 3 (lower is better)
Translates to: ALLPGSDIPVGL*KNLAYFEPQFL
Trigger: AAGAAACTGCGGTTCAAAGTAGGCAAGATTTTTCCAAAGTCCCACAGGGATGTCAGAGCCAGGGAGCAAGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000332468.5
3UTR TCA 72 bp AGTTCTCTCTTATTCACGTCGGTGTCAGAGAACATTTaGGGGTCTGAGTGTCAGGCAAGGCTGTCACACTGT +
Preference number: 3 (lower is better)
Translates to: SSLLFTSVSENI*GSECQARLSHC
Trigger: ACAGTGTGACAGCCTTGCCTGACACTCAGACCCTCAAATGTTCTCTGACACCGACGTGAATAAGAGAGAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332468.5
3UTR GCA 72 bp ACATTTCCAGAAGGCGTGAGGATGTTATGGATCCGATaGCTTCCAGTCCCATATGCCCTCTATAGCTGTCAT +
Preference number: 3 (lower is better)
Translates to: TFPEGVRMLWIR*LPVPYALYSCH
Trigger: ATGACAGCTATAGAGGGCATATGGGACTGGAAGGCATCGGATCCATAACATCCTCACGCCTTCTGGAAATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332468.5
3UTR TCA 72 bp AACCGCAGTTTCTTCATCTATACAACGGAGGTCATGTaGCCCCTGTTTGTTATGGGCTATCCCGTAATCCAC +
Preference number: 3 (lower is better)
Translates to: NRSFFIYTTEVM*PLFVMGYPVIH
Trigger: GTGGATTACGGGATAGCCCATAACAAACAGGGGTCACATGACCTCCGTTGTATAGATGAAGAAACTGCGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332468.5
3UTR CCA 72 bp ACATTTTTCACATTTCCAGAAGGCGTGAGGATGTTATaGATCCGATGCCTTCCAGTCCCATATGCCCTCTAT +
Preference number: 3 (lower is better)
Translates to: TFFTFPEGVRML*IRCLPVPYALY
Trigger: ATAGAGGGCATATGGGACTGGAAGGCATCGGATCCATAACATCCTCACGCCTTCTGGAAATGTGAAAAATGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000332468.5
3UTR TCA 72 bp CATCCCTGTGGGACTTTGGAAAAATCTTGCCTACTTTaGACCGCAGTTTCTTCATCTATACAACGGAGGTCA +
Preference number: 3 (lower is better)
Translates to: HPCGTLEKSCLL*TAVSSSIQRRS
Trigger: TGACCTCCGTTGTATAGATGAAGAAACTGCGGTTCAAAGTAGGCAAGATTTTTCCAAAGTCCCACAGGGATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR TCA 90 bp GTGGACATGGTGGGGCCCTCATCCTTCCTCCCACCCACTGGGCTTGCTGTCCTGCCTGGGAGCCCAGGCTaGGGACCGGGGTGCAGGCAG +
Preference number: 4 (lower is better)
Translates to: VDMVGPSSFLPPTGLAVLPGSPG*GPGCRQ
Trigger: CTGCCTGCACCCCGGTCCTCAGCCTGGGCTCCCAGG...CAGGACAGCAAGCCCAGTGGGTGGGAGGAAGGATGAGGGCCCCACCATGTCCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000215798.10
ENST00000382363.8
CDS-3UTR TCA 90 bp GGCTGTGGGACTGAGGTCCCCATGTCCTCGCTGGCTGGCTGTAAGCCAGGTCCTCCTGGGAGCCCAGGCTaGGGACCGGGGTGCAGGCAG +
Preference number: 4 (lower is better)
Translates to: GCGTEVPMSSLAGCKPGPPGSPG*GPGCRQ
Trigger: CTGCCTGCACCCCGGTCCTCAGCCTGGGCTCCCAGG...AGGACCTGGCTTACAGCCAGCCAGCGAGGACATGGGGACCTCAGTCCCACAGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332468.5
ENST00000630264.1
CDS-3UTR TCA 90 bp TGCGGCTGTGGGACTGAGGTCCCCATGTCCTCGCTGGCTGGCTGTAAGCCAGGTGCCTCAAGGTGGGCCTaGGAGGGCGGGCCCTTGGGG +
Preference number: 4 (lower is better)
Translates to: CGCGTEVPMSSLAGCKPGASRWA*EGGPLG
Trigger: CCCCAAGGGCCCGCCCTCTCAGGCCCACCTTGAGGC...ACCTGGCTTACAGCCAGCCAGCGAGGACATGGGGACCTCAGTCCCACAGCCGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR CCA 90 bp GGCTGTGGGACTGAGGTCCCCATGTCCTCGCTGGCTGGCTGTAAGCCAGGTCCTGTTCCTGAGGGAGGCTaGGGTGCCCCGGGCACCCCC +
Preference number: 4 (lower is better)
Translates to: GCGTEVPMSSLAGCKPGPVPEGG*GAPGTP
Trigger: GGGGGTGCCCGGGGCACCCCAGCCTCCCTCAGGAAC...AGGACCTGGCTTACAGCCAGCCAGCGAGGACATGGGGACCTCAGTCCCACAGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR TCA 90 bp GCCTCCCTGCTTGTCCGTTCCTGCTTAGTCTCTGCAGGCCAAGCAGCGAGCCCTCCTGGGAGCCCAGGCTaGGGACCGGGGTGCAGGCAG +
Preference number: 4 (lower is better)
Translates to: ASLLVRSCLVSAGQAASPPGSPG*GPGCRQ
Trigger: CTGCCTGCACCCCGGTCCTCAGCCTGGGCTCCCAGG...AGGGCTCGCTGCTTGGCCTGCAGAGACTAAGCAGGAACGGACAAGCAGGGAGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR TCA 90 bp ACGGACCTGCGGCTAACCATCCTGGAGCTAGAACGGGAGCTGGAGGAGCTGAAGCAGCCTGGACGAGGCTaGGGCCCAGCGGGCCCGCGT +
Preference number: 4 (lower is better)
Translates to: TDLRLTILELERELEELKQPGRG*GPAGPR
Trigger: ACGCGGGCCCGCTGGGCCTCAGCCTCGTCCAGGCTG...CTTCAGCTCCTCCAGCTCCCGTTCTAGCTCCAGGATGGTTAGCCGCAGGTCCGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR TCA 90 bp GTGGGACTGAGGTCCCCATGTCCTCGCTGGCTGGCTGTAAGCCAGGTCCTCTCAGGGGCACACTGGGCATaGAGGCCGCCGGCCAGGTCC +
Preference number: 4 (lower is better)
Translates to: VGLRSPCPRWLAVSQVLSGAHWA*RPPARS
Trigger: GGACCTGGCCGGCGGCCTTCATGCCCAGTGTGCCCC...TGAGAGGACCTGGCTTACAGCCAGCCAGCGAGGACATGGGGACCTCAGTCCCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR GCA 90 bp GGCCACAGGGAGCTCCCAGAACCCTGGCGACAGCTACACTGGCCCCATATTCTCAGCTCCCGCTGGCTCTaGCGCGACGCCTGCCGCTGG +
Preference number: 4 (lower is better)
Translates to: GHRELPEPWRQLHWPHILSSRWL*RDACRW
Trigger: CCAGCGGCAGGCGTCGCGGCAGAGCCAGCGGGAGCT...GAGAATATGGGGCCAGTGTAGCTGTCGCCAGGGTTCTGGGAGCTCCCTGTGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215798.10
ENST00000382363.8
CDS-3UTR CCA 90 bp AGACAGGCCACAGGGAGCTCCCAGAACCCTGGCGACAGCTACACTGGCCCCATACGCGACGCCTGCCGCTaGGCCTGGACCACGAGGCCT +
Preference number: 4 (lower is better)
Translates to: RQATGSSQNPGDSYTGPIRDACR*AWTTRP
Trigger: AGGCCTCGTGGTCCAGGCCCAGCGGCAGGCGTCGCG...TATGGGGCCAGTGTAGCTGTCGCCAGGGTTCTGGGAGCTCCCTGTGGCCTGTCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215798.10
ENST00000382363.8
CDS-3UTR CCA 90 bp TGGACATGGTGGGGCCCTCATCCTTCCTCCCACCCACTGGGCTTGCTGTCCTGTCCTCCGAGCTCCCGCTaGCTCTGCCGCGACGCCTGC +
Preference number: 4 (lower is better)
Translates to: WTWWGPHPSSHPLGLLSCPPSSR*LCRDAC
Trigger: GCAGGCGTCGCGGCAGAGCCAGCGGGAGCTCGGAGG...ACAGGACAGCAAGCCCAGTGGGTGGGAGGAAGGATGAGGGCCCCACCATGTCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215798.10
ENST00000382363.8
CDS-3UTR CCA 90 bp AGACAGGCCACAGGGAGCTCCCAGAACCCTGGCGACAGCTACACTGGCCCCATACCTCCGAGCTCCCGCTaGCTCTGCCGCGACGCCTGC +
Preference number: 4 (lower is better)
Translates to: RQATGSSQNPGDSYTGPIPPSSR*LCRDAC
Trigger: GCAGGCGTCGCGGCAGAGCCAGCGGGAGCTCGGAGG...TATGGGGCCAGTGTAGCTGTCGCCAGGGTTCTGGGAGCTCCCTGTGGCCTGTCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215798.10
ENST00000382363.8
CDS-3UTR CCA 90 bp GGCTGTGGGACTGAGGTCCCCATGTCCTCGCTGGCTGGCTGTAAGCCAGGTCCTGGCCCTGCATGTCCGTaGGGCTCACGGTGCGGCGCT +
Preference number: 4 (lower is better)
Translates to: GCGTEVPMSSLAGCKPGPGPACP*GSRCGA
Trigger: AGCGCCGCACCGTGAGCCCCACGGACATGCAGGGCC...AGGACCTGGCTTACAGCCAGCCAGCGAGGACATGGGGACCTCAGTCCCACAGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR TCA 90 bp GACCGGGGTGCAGGCAGGAAGGGTCCATCCCCATGTGCAGAGTCCAGCTGGGCACTTCGGAGCCGATCCTaGCGCCCTCCAGGACCAGAG +
Preference number: 4 (lower is better)
Translates to: DRGAGRKGPSPCAESSWALRSRS*RPPGPE
Trigger: CTCTGGTCCTGGAGGGCGTCAGGATCGGCTCCGAAG...TGCCCAGCTGGACTCTGCACATGGGGATGGACCCTTCCTGCCTGCACCCCGGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000215798.10
ENST00000382363.8
CDS-3UTR TCA 90 bp GACCGGGGTGCAGGCAGGAAGGGTCCATCCCCATGTGCAGAGTCCAGCTGGGCAGGCAGCGCCGTGTCTTaGGGGATGCCAGTCTCCGCA +
Preference number: 4 (lower is better)
Translates to: DRGAGRKGPSPCAESSWAGSAVS*GMPVSA
Trigger: TGCGGAGACTGGCATCCCTCAAGACACGGCGCTGCC...TGCCCAGCTGGACTCTGCACATGGGGATGGACCCTTCCTGCCTGCACCCCGGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000215798.10
ENST00000382363.8
CDS-3UTR TCA 90 bp CCGATCCTTGCGGCTGTGGGACTGAGGTCCCCATGTCCTCGCTGGCTGGCTGTACTCAGGAGCCAGGCCTaGGCCTCCGTCTGTCCCAGG +
Preference number: 4 (lower is better)
Translates to: PILAAVGLRSPCPRWLAVLRSQA*ASVCPR
Trigger: CCTGGGACAGACGGAGGCTCAGGCCTGGCTCCTGAG...TACAGCCAGCCAGCGAGGACATGGGGACCTCAGTCCCACAGCCGCAAGGATCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR TCA 90 bp GCCTCCCTGCTTGTCCGTTCCTGCTTAGTCTCTGCAGGCCAAGCAGCGAGCCCTGCTGCAGGAGGAAGGTaGGCGCAGGGCGGCAGCGGA +
Preference number: 4 (lower is better)
Translates to: ASLLVRSCLVSAGQAASPAAGGR*AQGGSG
Trigger: TCCGCTGCCGCCCTGCGCTCACCTTCCTCCTGCAGC...AGGGCTCGCTGCTTGGCCTGCAGAGACTAAGCAGGAACGGACAAGCAGGGAGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR TCA 90 bp GTGGGACTGAGGTCCCCATGTCCTCGCTGGCTGGCTGTAAGCCAGGTCCTCTCAGGCCCTGGTGCCCTGTaGCGCATGCGCCAGCGTCCA +
Preference number: 4 (lower is better)
Translates to: VGLRSPCPRWLAVSQVLSGPGAL*RMRQRP
Trigger: TGGACGCTGGCGCATGCGTCACAGGGCACCAGGGCC...TGAGAGGACCTGGCTTACAGCCAGCCAGCGAGGACATGGGGACCTCAGTCCCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR GCA 90 bp GGCCACAGGGAGCTCCCAGAACCCTGGCGACAGCTACACTGGCCCCATATTCTCGGATCTGGGAGGCCCTaGGCTGCCCTGCTCAGCCGG +
Preference number: 4 (lower is better)
Translates to: GHRELPEPWRQLHWPHILGSGRP*AALLSR
Trigger: CCGGCTGAGCAGGGCAGCGCAGGGCCTCCCAGATCC...GAGAATATGGGGCCAGTGTAGCTGTCGCCAGGGTTCTGGGAGCTCCCTGTGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215798.10
ENST00000382363.8
CDS-3UTR GCA 90 bp GAGGTCCCCATGTCCTCGCTGGCTGGCTGTAAGCCAGGTCCTCTCACGGCTCCTCGGGAGCAGGGGCAATaGCAGCTCAGGGCCCAGCAG +
Preference number: 4 (lower is better)
Translates to: EVPMSSLAGCKPGPLTAPREQGQ*QLRAQQ
Trigger: CTGCTGGGCCCTGAGCTGGCATTGCCCCTGCTCCCG...AGGAGCCGTGAGAGGACCTGGCTTACAGCCAGCCAGCGAGGACATGGGGACCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR GCA 90 bp CCTGCAGGCCTGTCCCATGTCTTTTCTTGGGTAGGGACGGTGCCCCAGGGCGCTAGGCCAGACGCCTGGTaGCCAGGGGCTCTGCCACAG +
Preference number: 4 (lower is better)
Translates to: PAGLSHVFSWVGTVPQGARPDAW*PGALPQ
Trigger: CTGTGGCAGAGCCCCTGGGCACCAGGCGTCTGGCCT...AGCGCCCTGGGGCACCGTCCCTACCCAAGAAAAGACATGGGACAGGCCTGCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR GCA 90 bp CCTAGAGGCCGTCCACCTTCCTTGCCATGGGGCTCCCTCCATTGGGCTTGCTGTCCGTGGGGCTCACGGTaGGGCGCTTCTGGGACAGCC +
Preference number: 4 (lower is better)
Translates to: PRGRPPSLPWGSLHWACCPWGSR*GASGTA
Trigger: GGCTGTCCCAGAAGCGCCGCACCGTGAGCCCCACGG...ACAGCAAGCCCAATGGAGGGAGCCCCATGGCAAGGAAGGTGGACGGCCTCTAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR GCA 90 bp GAGGTCCCCATGTCCTCGCTGGCTGGCTGTAAGCCAGGTCCTCTCACGGCTCCTGCAGATGATGCCCCCTaGACAGGCTGCGGGGCCCTG +
Preference number: 4 (lower is better)
Translates to: EVPMSSLAGCKPGPLTAPADDAP*TGCGAL
Trigger: CAGGGCCCCGCAGCCTGTGCAGGGGGCATCATCTGC...AGGAGCCGTGAGAGGACCTGGCTTACAGCCAGCCAGCGAGGACATGGGGACCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR CCA 90 bp GTCCTCTCACGGCTCCTAGAGGCCGTCCACCTTCCTTGCCATGGGGCTCCCTCCAGGTGCAGCTGTTGGTaGGTCGGCTGGAGGGCGCTG +
Preference number: 4 (lower is better)
Translates to: VLSRLLEAVHLPCHGAPSRCSCW*VGWRAL
Trigger: CAGCGCCCTCCAGCCGACCCACCAACAGCTGCACCT...GGAGGGAGCCCCATGGCAAGGAAGGTGGACGGCCTCTAGGAGCCGTGAGAGGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR CCA 90 bp GGCTGTGGGACTGAGGTCCCCATGTCCTCGCTGGCTGGCTGTAAGCCAGGTCCTCAGAGGCCAGACGCCTaGTGCCCAGGGGCTCTGCCA +
Preference number: 4 (lower is better)
Translates to: GCGTEVPMSSLAGCKPGPQRPDA*CPGALP
Trigger: TGGCAGAGCCCCTGGGCACCAGGCGTCTGGCCTCTG...AGGACCTGGCTTACAGCCAGCCAGCGAGGACATGGGGACCTCAGTCCCACAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332468.5
3UTR CAA 72 bp GTCCCACTGGGGCCACCAGGAGCTGGGCTAGGACGCTaGCCCAGACTCGTCCATCGGTCAGTGAGGGAACCG +
Preference number: 4 (lower is better)
Translates to: VPLGPPGAGLGR*PRLVHRSVREP
Trigger: CGGTTCCCTCACTGACCGATGGACGAGTCTGGGCAAGCGTCCTAGCCCAGCTCCTGGTGGCCCCAGTGGGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR TCA 90 bp GACAGGCCACAGGGAGCTCCCAGAACCCTGGCGACAGCTACACTGGCCCCATATGGGACTCTCCGCTGGTaGTCTCAGCCGTGGCCTGGG +
Preference number: 4 (lower is better)
Translates to: DRPQGAPRTLATATLAPYGTLRW*SQPWPG
Trigger: CCCAGGCCACGGCTGAGATCACCAGCGGAGAGTCCC...ATATGGGGCCAGTGTAGCTGTCGCCAGGGTTCTGGGAGCTCCCTGTGGCCTGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215798.10
ENST00000382363.8
CDS-3UTR TCA 90 bp CCGATCCTTGCGGCTGTGGGACTGAGGTCCCCATGTCCTCGCTGGCTGGCTGTACCTGCCTCAGCCTCCTaGGTAGCTGGGACTACGGGG +
Preference number: 4 (lower is better)
Translates to: PILAAVGLRSPCPRWLAVPASAS*VAGTTG
Trigger: CCCCGTAGTCCCAGCTACTCAGGAGGCTGAGGCAGG...TACAGCCAGCCAGCGAGGACATGGGGACCTCAGTCCCACAGCCGCAAGGATCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR TCA 90 bp GTCTCAGGTGGGTCAGCCTCAGCCTCTATCTCCCCACTGTGGTGGCCTTCACACAGGGCAGGCAGAGGGTaGGCCAGGGCCCGGGGCATA +
Preference number: 4 (lower is better)
Translates to: VSGGSASASISPLWWPSHRAGRG*ARARGI
Trigger: TATGCCCCGGGCCCTGGCTCACCCTCTGCCTGCCCT...GTGTGAAGGCCACCACAGTGGGGAGATAGAGGCTGAGGCTGACCCACCTGAGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR TCA 90 bp CTTGCGGCTGTGGGACTGAGGTCCCCATGTCCTCGCTGGCTGGCTGTAAGCCAGAAGAGGCTCCCAAGCTaGGGCTGTGGCCAGGGAGGG +
Preference number: 4 (lower is better)
Translates to: LAAVGLRSPCPRWLAVSQKRLPS*GCGQGG
Trigger: CCCTCCCTGGCCACAGCCTCAGCTTGGGAGCCTCTT...CTGGCTTACAGCCAGCCAGCGAGGACATGGGGACCTCAGTCCCACAGCCGCAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR GCA 90 bp GACCGGGGTGCAGGCAGGAAGGGTCCATCCCCATGTGCAGAGTCCAGCTGGGCACACAGTGGGCAGGTCTaGTGGAGCATCAGCCAGGGG +
Preference number: 4 (lower is better)
Translates to: DRGAGRKGPSPCAESSWAHSGQV*WSISQG
Trigger: CCCCTGGCTGATGCTCCAGCAGACCTGCCCACTGTG...TGCCCAGCTGGACTCTGCACATGGGGATGGACCCTTCCTGCCTGCACCCCGGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000215798.10
ENST00000332468.5
ENST00000382363.8
ENST00000630264.1
CDS-3UTR GCA 90 bp GGGGTGCAGGCAGGAAGGGTCCATCCCCATGTGCAGAGTCCAGCTGGGCAGCTAGGTCCGGTGTGCATCTaGCTGCTGCCAGCTTCCCCC +
Preference number: 4 (lower is better)
Translates to: GVQAGRVHPHVQSPAGQLGPVCI*LLPASP
Trigger: GGGGGAAGCTGGCAGCAGGCAGATGCACACCGGACC...TAGCTGCCCAGCTGGACTCTGCACATGGGGATGGACCCTTCCTGCCTGCACCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR GCA 90 bp CCTCTCACGGCTCCTAGAGGCCGTCCACCTTCCTTGCCATGGGGCTCCCTCCATCCAGAGCCAGCCATCTaGGTTCCAAGGGCCGGGGTC +
Preference number: 4 (lower is better)
Translates to: PLTAPRGRPPSLPWGSLHPEPAI*VPRAGV
Trigger: GACCCCGGCCCTTGGAACGCAGATGGCTGGCTCTGG...ATGGAGGGAGCCCCATGGCAAGGAAGGTGGACGGCCTCTAGGAGCCGTGAGAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR GCA 90 bp GAAGCCCCTATCCAGCAGCAGGTCTTCAGACTCTGCCCCGGGAACTTGTGGAGACGCAGGCGGCCCCTCTaGAGGCGATGGGCTGCCTCC +
Preference number: 4 (lower is better)
Translates to: EAPIQQQVFRLCPGNLWRRRRPL*RRWAAS
Trigger: GGAGGCAGCCCATCGCCTGCAGAGGGGCCGCCTGCG...TCTCCACAAGTTCCCGGGGCAGAGTCTGAAGACCTGCTGCTGGATAGGGGCTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR GCA 90 bp GAGGCCGTCCACCTTCCTTGCCATGGGGCTCCCTCCATTGGGCTTGCTGTCCTGGTGCCCTGTGACGCATaGGCCAGCGTCCAGGGAAGC +
Preference number: 4 (lower is better)
Translates to: EAVHLPCHGAPSIGLAVLVPCDA*ASVQGS
Trigger: GCTTCCCTGGACGCTGGCGCATGCGTCACAGGGCAC...CAGGACAGCAAGCCCAATGGAGGGAGCCCCATGGCAAGGAAGGTGGACGGCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR GCA 90 bp AGGGCCCGGGGCATAGCTGTGCTCTGGGCAATGGGGCCTCACAGGAGTCCTCAGTTGAGACGGCCCTGGTaGCCTGTGACGCATGCGCCA +
Preference number: 4 (lower is better)
Translates to: RARGIAVLWAMGPHRSPQLRRPW*PVTHAP
Trigger: TGGCGCATGCGTCACAGGGCACCAGGGCCGTCTCAA...CTGAGGACTCCTGTGAGGCCCCATTGCCCAGAGCACAGCTATGCCCCGGGCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR CCA 90 bp GACAGGCCACAGGGAGCTCCCAGAACCCTGGCGACAGCTACACTGGCCCCATATGCTGGACCAGGGCCTTaGGATAGGCCTGCGGGCCAC +
Preference number: 4 (lower is better)
Translates to: DRPQGAPRTLATATLAPYAGPGP*DRPAGH
Trigger: GTGGCCCGCAGGCCTATCCCAAGGCCCTGGTCCAGC...ATATGGGGCCAGTGTAGCTGTCGCCAGGGTTCTGGGAGCTCCCTGTGGCCTGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215798.10
ENST00000382363.8
CDS-3UTR CCA 90 bp GACCGGGGTGCAGGCAGGAAGGGTCCATCCCCATGTGCAGAGTCCAGCTGGGCAAGTGGGCAGGTCTGCTaGAGCATCAGCCAGGGGTCC +
Preference number: 4 (lower is better)
Translates to: DRGAGRKGPSPCAESSWASGQVC*SISQGS
Trigger: GGACCCCTGGCTGATGCTCCAGCAGACCTGCCCACT...TGCCCAGCTGGACTCTGCACATGGGGATGGACCCTTCCTGCCTGCACCCCGGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000215798.10
ENST00000332468.5
ENST00000382363.8
ENST00000630264.1
CDS-3UTR CCA 90 bp GACCGGGGTGCAGGCAGGAAGGGTCCATCCCCATGTGCAGAGTCCAGCTGGGCACATCCTGTCCTGTCCTaGGAGCCCAGGCTGAGGACC +
Preference number: 4 (lower is better)
Translates to: DRGAGRKGPSPCAESSWAHPVLS*EPRLRT
Trigger: GGTCCTCAGCCTGGGCTCCCAGGACAGGACAGGATG...TGCCCAGCTGGACTCTGCACATGGGGATGGACCCTTCCTGCCTGCACCCCGGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000215798.10
ENST00000332468.5
ENST00000382363.8
ENST00000630264.1
CDS-3UTR CCA 90 bp GACCGGGGTGCAGGCAGGAAGGGTCCATCCCCATGTGCAGAGTCCAGCTGGGCAGGAAGGGAGCCAGGCTaGACAGGCAGTGGGACCCAT +
Preference number: 4 (lower is better)
Translates to: DRGAGRKGPSPCAESSWAGREPG*TGSGTH
Trigger: ATGGGTCCCACTGCCTGTCCAGCCTGGCTCCCTTCC...TGCCCAGCTGGACTCTGCACATGGGGATGGACCCTTCCTGCCTGCACCCCGGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000215798.10
ENST00000382363.8
CDS-3UTR CCA 90 bp CCTAGAGGCCGTCCACCTTCCTTGCCATGGGGCTCCCTCCATTGGGCTTGCTGTCCCCTCTGCAGGCGATaGGCTGCCTCCACTCCACGG +
Preference number: 4 (lower is better)
Translates to: PRGRPPSLPWGSLHWACCPLCRR*AASTPR
Trigger: CCGTGGAGTGGAGGCAGCCCATCGCCTGCAGAGGGG...ACAGCAAGCCCAATGGAGGGAGCCCCATGGCAAGGAAGGTGGACGGCCTCTAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR CCA 90 bp CCTAGAGGCCGTCCACCTTCCTTGCCATGGGGCTCCCTCCATTGGGCTTGCTGTGGGGCCACCAGGAGCTaGGCTAGGACGCTTGCCCAG +
Preference number: 4 (lower is better)
Translates to: PRGRPPSLPWGSLHWACCGATRS*ARTLAQ
Trigger: CTGGGCAAGCGTCCTAGCCCAGCTCCTGGTGGCCCC...ACAGCAAGCCCAATGGAGGGAGCCCCATGGCAAGGAAGGTGGACGGCCTCTAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR CCA 90 bp GCGGCTGTGGGACTGAGGTCCCCATGTCCTCGCTGGCTGGCTGTAAGCCAGGTCATCAAGCCTGGAGCTTaGGGTGCGGGCCGCAGAGAG +
Preference number: 4 (lower is better)
Translates to: AAVGLRSPCPRWLAVSQVIKPGA*GAGRRE
Trigger: CTCTCTGCGGCCCGCACCCCAAGCTCCAGGCTTGAT...GACCTGGCTTACAGCCAGCCAGCGAGGACATGGGGACCTCAGTCCCACAGCCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR CCA 90 bp GCTGCAGAGCGAGCGGGAGCAGGGGCAATGCCAGCTCAGGGCCCAGCAGGTGAGACCTCGCCCCAGCTCTaGCTTCCTAGCCTACCACTA +
Preference number: 4 (lower is better)
Translates to: AAERAGAGAMPAQGPAGETSPQL*LPSLPL
Trigger: TAGTGGTAGGCTAGGAAGCCAGAGCTGGGGCGAGGT...CTCACCTGCTGGGCCCTGAGCTGGCATTGCCCCTGCTCCCGCTCGCTCTGCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR CCA 90 bp GAGGCCGTCCACCTTCCTTGCCATGGGGCTCCCTCCATTGGGCTTGCTGTCCTGCCCAAGCTGAGGCTGTaGCCAGGGAGGGCTTCCCTG +
Preference number: 4 (lower is better)
Translates to: EAVHLPCHGAPSIGLAVLPKLRL*PGRASL
Trigger: CAGGGAAGCCCTCCCTGGCCACAGCCTCAGCTTGGG...CAGGACAGCAAGCCCAATGGAGGGAGCCCCATGGCAAGGAAGGTGGACGGCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332468.5
3UTR CAA 72 bp TCCAAGGGCCGGGGTCTTCAAGCTGGGATCCTGGCCTaGACCAGGTCCGGTGTGCATCTGCCTGCTGCCAGC +
Preference number: 4 (lower is better)
Translates to: SKGRGLQAGILA*TRSGVHLPAAS
Trigger: GCTGGCAGCAGGCAGATGCACACCGGACCTGGTCAAGGCCAGGATCCCAGCTTGAAGACCCCGGCCCTTGGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR TCA 90 bp GCTGTGGGACTGAGGTCCCCATGTCCTCGCTGGCTGGCTGTAAGCCAGGTCCTCCAGGGAGGGCTTCCCTaGGGAAGTAGCCCCTGGGTT +
Preference number: 4 (lower is better)
Translates to: AVGLRSPCPRWLAVSQVLQGGLP*GSSPWV
Trigger: AACCCAGGGGCTACTTCCTCAGGGAAGCCCTCCCTG...GAGGACCTGGCTTACAGCCAGCCAGCGAGGACATGGGGACCTCAGTCCCACAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR GCA 90 bp GTGGACATGGTGGGGCCCTCATCCTTCCTCCCACCCACTGGGCTTGCTGTCCTGGGGCCGCCTGCTCCTTaGCCACGTATGCCACTGCAA +
Preference number: 4 (lower is better)
Translates to: VDMVGPSSFLPPTGLAVLGPPAP*PRMPLQ
Trigger: TTGCAGTGGCATACGTGGGCAAGGAGCAGGCGGCCC...CAGGACAGCAAGCCCAGTGGGTGGGAGGAAGGATGAGGGCCCCACCATGTCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000215798.10
ENST00000382363.8
CDS-3UTR GCA 90 bp CCGATCCTTGCGGCTGTGGGACTGAGGTCCCCATGTCCTCGCTGGCTGGCTGTACACAGTGGGCAGGTCTaGTGGAGCATCAGCCAGGGG +
Preference number: 4 (lower is better)
Translates to: PILAAVGLRSPCPRWLAVHSGQV*WSISQG
Trigger: CCCCTGGCTGATGCTCCAGCAGACCTGCCCACTGTG...TACAGCCAGCCAGCGAGGACATGGGGACCTCAGTCCCACAGCCGCAAGGATCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332468.5
ENST00000421022.1
ENST00000630264.1
ENST00000631046.2
CDS-3UTR GCA 90 bp GGCAGAATTCCGATCCTTGCGGCTGTGGGACTGAGGTCCCCATGTCCTCGCTGGAGGAACGTGAGGAGCTaGGGGGCAGCCTGGACGAGG +
Preference number: 4 (lower is better)
Translates to: GRIPILAAVGLRSPCPRWRNVRS*GAAWTR
Trigger: CCTCGTCCAGGCTGCCCCGCAGCTCCTCACGTTCCT...CCAGCGAGGACATGGGGACCTCAGTCCCACAGCCGCAAGGATCGGAATTCTGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR GCA 90 bp GTCTCAGGTGGGTCAGCCTCAGCCTCTATCTCCCCACTGTGGTGGCCTTCACACCTGCAGGCGATGGGCTaGCTCCACTCCACGGGGCAC +
Preference number: 4 (lower is better)
Translates to: VSGGSASASISPLWWPSHLQAMG*LHSTGH
Trigger: GTGCCCCGTGGAGTGGAGGCAGCCCATCGCCTGCAG...GTGTGAAGGCCACCACAGTGGGGAGATAGAGGCTGAGGCTGACCCACCTGAGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR GCA 90 bp CACAACAGCCAAACGCAGACACAGGTCTGGTTGTCCCCACAGCCTGTGCTCTTCTGGGGCTCAGGCCACTaGCGGCTGCCACCGTGGGCC +
Preference number: 4 (lower is better)
Translates to: HNSQTQTQVWLSPQPVLFWGSGH*RLPPWA
Trigger: GGCCCACGGTGGCAGCCGGCAGTGGCCTGAGCCCCA...GAAGAGCACAGGCTGTGGGGACAACCAGACCTGTGTCTGCGTTTGGCTGTTGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR GCA 90 bp CCTGCAGTTCCCAGCCACGACCTTCAAGAACACCAGGAGTGTCCACTCCCAGACCAGGCTGCGGGGCCCTaGATGTCCGTGGGGCTCACG +
Preference number: 4 (lower is better)
Translates to: PAVPSHDLQEHQECPLPDQAAGP*MSVGLT
Trigger: CGTGAGCCCCACGGACATGCAGGGCCCCGCAGCCTG...GTCTGGGAGTGGACACTCCTGGTGTTCTTGAAGGTCGTGGCTGGGAACTGCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR CCA 90 bp GGGGTGCAGGCAGGAAGGGTCCATCCCCATGTGCAGAGTCCAGCTGGGCAGCTAGAGCTCCCAGAACCCTaGCGACAGCTACACTGGCCC +
Preference number: 4 (lower is better)
Translates to: GVQAGRVHPHVQSPAGQLELPEP*RQLHWP
Trigger: GGGCCAGTGTAGCTGTCGCCAGGGTTCTGGGAGCTC...TAGCTGCCCAGCTGGACTCTGCACATGGGGATGGACCCTTCCTGCCTGCACCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000215798.10
CDS-3UTR CCA 90 bp GCCGCAGGCGGCCCCTCTGCAGGCGATGGGCTGCCTCCACTCCACGGGGCACACATTAGCTCCCAGTTCTaGCAGTCAGAAGTCCAGGTT +
Preference number: 4 (lower is better)
Translates to: AAGGPSAGDGLPPLHGAHISSQF*QSEVQV
Trigger: AACCTGGACTTCTGACTGCCAGAACTGGGAGCTAAT...GTGTGCCCCGTGGAGTGGAGGCAGCCCATCGCCTGCAGAGGGGCCGCCTGCGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR CCA 90 bp GGACTGAGGTCCCCATGTCCTCGCTGGCTGGCTGTAAGCCAGGTCCTCTCACGGGTGTGGGCAGGACACTaGGGACTGCAGCTCCCTAGC +
Preference number: 4 (lower is better)
Translates to: GLRSPCPRWLAVSQVLSRVWAGH*GLQLPS
Trigger: GCTAGGGAGCTGCAGTCCCCAGTGTCCTGCCCACAC...CCGTGAGAGGACCTGGCTTACAGCCAGCCAGCGAGGACATGGGGACCTCAGTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR CCA 90 bp GAGGCCGTCCACCTTCCTTGCCATGGGGCTCCCTCCATTGGGCTTGCTGTCCTGGGGAGAAGCAAGGCCTaGAGCAGGCGACTACGGACC +
Preference number: 4 (lower is better)
Translates to: EAVHLPCHGAPSIGLAVLGRSKA*SRRLRT
Trigger: GGTCCGTAGTCGCCTGCTCCAGGCCTTGCTTCTCCC...CAGGACAGCAAGCCCAATGGAGGGAGCCCCATGGCAAGGAAGGTGGACGGCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR CCA 90 bp ACTTGTTGGCAGAATTCCGATCCTTGCGGCTGTGGGACTGAGGTCCCCATGTCCCCCAGCGGGCCCGCGTaGAGGAGCAGCTGCAGAGCG +
Preference number: 4 (lower is better)
Translates to: TCWQNSDPCGCGTEVPMSPSGPA*RSSCRA
Trigger: CGCTCTGCAGCTGCTCCTCCACGCGGGCCCGCTGGG...GGACATGGGGACCTCAGTCCCACAGCCGCAAGGATCGGAATTCTGCCAACAAGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR CCA 90 bp GCGGCTGTGGGACTGAGGTCCCCATGTCCTCGCTGGCTGGCTGTAAGCCAGGTCCCTGGCACCAGAAGATaGCCAGTGCCCACTGATGGG +
Preference number: 4 (lower is better)
Translates to: AAVGLRSPCPRWLAVSQVPGTRR*PVPTDG
Trigger: CCCATCAGTGGGCACTGGCCATCTTCTGGTGCCAGG...GACCTGGCTTACAGCCAGCCAGCGAGGACATGGGGACCTCAGTCCCACAGCCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR CCA 90 bp CACAACAGCCAAACGCAGACACAGGTCTGGTTGTCCCCACAGCCTGTGCTCTTCTGCCGGCTGCCACCGTaGGCCGCTGGGCAGCAGAGC +
Preference number: 4 (lower is better)
Translates to: HNSQTQTQVWLSPQPVLFCRLPP*AAGQQS
Trigger: GCTCTGCTGCCCAGCGGCCCACGGTGGCAGCCGGCA...GAAGAGCACAGGCTGTGGGGACAACCAGACCTGTGTCTGCGTTTGGCTGTTGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR CCA 90 bp AGGGCCCTCGCTAGCCTGGGCATCTGCAATGTAGGCTGCAGGGAAAGAGGGCTCACGGTGCGGCGCTTCTaGGACAGCCTGCTGAGGCTG +
Preference number: 4 (lower is better)
Translates to: RALASLGICNVGCRERGLTVRRF*DSLLRL
Trigger: CAGCCTCAGCAGGCTGTCCCAGAAGCGCCGCACCGT...GAGCCCTCTTTCCCTGCAGCCTACATTGCAGATGCCCAGGCTAGCGAGGGCCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332468.5
3UTR CAA 72 bp GGTCCTCTCACGGCTCCTAGAGGCCGTCCACCTTCCTaGCCATGGGGCTCCCTCCATTGGGCTTGCTGTCCT +
Preference number: 4 (lower is better)
Translates to: GPLTAPRGRPPS*PWGSLHWACCP
Trigger: AGGACAGCAAGCCCAATGGAGGGAGCCCCATGGCAAGGAAGGTGGACGGCCTCTAGGAGCCGTGAGAGGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332468.5
ENST00000630264.1
CDS-3UTR TCA 90 bp CTTGCGGCTGTGGGACTGAGGTCCCCATGTCCTCGCTGGCTGGCTGTAAGCCAGTGCCGTTCCCAAGCTTaGGCTGGCCGTGTGACCTTG +
Preference number: 4 (lower is better)
Translates to: LAAVGLRSPCPRWLAVSQCRSQA*AGRVTL
Trigger: CAAGGTCACACGGCCAGCTCAAGCTTGGGAACGGCA...CTGGCTTACAGCCAGCCAGCGAGGACATGGGGACCTCAGTCCCACAGCCGCAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR TCA 90 bp CCTCCCTGCAGTTCCCAGCCACGACCTTCAAGAACACCAGGAGTGTCCACTCCCGGAAGGAAGTGGGGGTaGGACCCCCAGAGCCAGCCA +
Preference number: 4 (lower is better)
Translates to: PPCSSQPRPSRTPGVSTPGRKWG*DPQSQP
Trigger: TGGCTGGCTCTGGGGGTCTCACCCCCACTTCCTTCC...GGGAGTGGACACTCCTGGTGTTCTTGAAGGTCGTGGCTGGGAACTGCAGGGAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR TCA 90 bp GCGGCTGTGGGACTGAGGTCCCCATGTCCTCGCTGGCTGGCTGTAAGCCAGGTCAGCCAGGAGTTCAGTTaGGAGTCCCCAGGGTCAGAC +
Preference number: 4 (lower is better)
Translates to: AAVGLRSPCPRWLAVSQVSQEFS*ESPGSD
Trigger: GTCTGACCCTGGGGACTCTCAACTGAACTCCTGGCT...GACCTGGCTTACAGCCAGCCAGCGAGGACATGGGGACCTCAGTCCCACAGCCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR TCA 90 bp GGACTGAGGTCCCCATGTCCTCGCTGGCTGGCTGTAAGCCAGGTCCTCTCACGGACAGGAGGGTGGGCCTaGCCAACCACACTATTGGCG +
Preference number: 4 (lower is better)
Translates to: GLRSPCPRWLAVSQVLSRTGGWA*PTTLLA
Trigger: CGCCAATAGTGTGGTTGGTCAGGCCCACCCTCCTGT...CCGTGAGAGGACCTGGCTTACAGCCAGCCAGCGAGGACATGGGGACCTCAGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR TCA 90 bp CTTGCGGCTGTGGGACTGAGGTCCCCATGTCCTCGCTGGCTGGCTGTAAGCCAGGTCCATGGGACCCTCTaGAGGGCCTCTCTCTTGGCT +
Preference number: 4 (lower is better)
Translates to: LAAVGLRSPCPRWLAVSQVHGTL*RASLLA
Trigger: AGCCAAGAGAGAGGCCCTTCAGAGGGTCCCATGGAC...CTGGCTTACAGCCAGCCAGCGAGGACATGGGGACCTCAGTCCCACAGCCGCAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR TCA 90 bp CCTGCAGGCCTGTCCCATGTCTTTTCTTGGGTAGGGACGGTGCCCCAGGGCGCTATGGCAGCCAGCCCATaGGAAGCAGGGTGGGTAAGG +
Preference number: 4 (lower is better)
Translates to: PAGLSHVFSWVGTVPQGAMAASP*EAGWVR
Trigger: CCTTACCCACCCTGCTTCTCATGGGCTGGCTGCCAT...AGCGCCCTGGGGCACCGTCCCTACCCAAGAAAAGACATGGGACAGGCCTGCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR TCA 90 bp CCTCTCACGGCTCCTAGAGGCCGTCCACCTTCCTTGCCATGGGGCTCCCTCCATTTGGCTCAGAGCAGATaGTGCCCCCTGCACAGGCTG +
Preference number: 4 (lower is better)
Translates to: PLTAPRGRPPSLPWGSLHLAQSR*CPLHRL
Trigger: CAGCCTGTGCAGGGGGCATCATCTGCTCTGAGCCAA...ATGGAGGGAGCCCCATGGCAAGGAAGGTGGACGGCCTCTAGGAGCCGTGAGAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR GCA 90 bp TGGACATGGTGGGGCCCTCATCCTTCCTCCCACCCACTGGGCTTGCTGTCCTGTCCAGCCTTCCACTGGTaGCTCCTGCTCGGCATCCAC +
Preference number: 4 (lower is better)
Translates to: WTWWGPHPSSHPLGLLSCPAFHW*LLLGIH
Trigger: GTGGATGCCGAGCAGGAGGCACCAGTGGAAGGCTGG...ACAGGACAGCAAGCCCAGTGGGTGGGAGGAAGGATGAGGGCCCCACCATGTCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215798.10
ENST00000382363.8
CDS-3UTR GCA 90 bp GTGGACATGGTGGGGCCCTCATCCTTCCTCCCACCCACTGGGCTTGCTGTCCTGTGCTGCAGGGGTTTCTaGTCCTGGGCACGACTGCCT +
Preference number: 4 (lower is better)
Translates to: VDMVGPSSFLPPTGLAVLCCRGF*SWARLP
Trigger: AGGCAGTCGTGCCCAGGAGCAGAAACCCCTGCAGCA...CAGGACAGCAAGCCCAGTGGGTGGGAGGAAGGATGAGGGCCCCACCATGTCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000215798.10
ENST00000382363.8
CDS-3UTR GCA 90 bp CTGGCCACTGTAGTCTCAGCCCCCAGGAATTCCCAGACAGGCCACAGGGAGCTCGGACCACGAGGCCTGTaGACAGGAGCATGGCCACCA +
Preference number: 4 (lower is better)
Translates to: LATVVSAPRNSQTGHRELGPRGL*TGAWPP
Trigger: TGGTGGCCATGCTCCTGTGCACAGGCCTCGTGGTCC...GAGCTCCCTGTGGCCTGTCTGGGAATTCCTGGGGGCTGAGACTACAGTGGCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000215798.10
ENST00000382363.8
CDS-3UTR GCA 90 bp GGCCACAGGGAGCTCCCAGAACCCTGGCGACAGCTACACTGGCCCCATATTCTCCCGTGTCTTGAGGGATaGCAGTCTCCGCACCACGCG +
Preference number: 4 (lower is better)
Translates to: GHRELPEPWRQLHWPHILPCLEG*QSPHHA
Trigger: CGCGTGGTGCGGAGACTGGCATCCCTCAAGACACGG...GAGAATATGGGGCCAGTGTAGCTGTCGCCAGGGTTCTGGGAGCTCCCTGTGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215798.10
ENST00000382363.8
CDS-3UTR GCA 90 bp GGCCACAGGGAGCTCCCAGAACCCTGGCGACAGCTACACTGGCCCCATATTCTCCACAGTGGGCAGGTCTaGTGGAGCATCAGCCAGGGG +
Preference number: 4 (lower is better)
Translates to: GHRELPEPWRQLHWPHILHSGQV*WSISQG
Trigger: CCCCTGGCTGATGCTCCAGCAGACCTGCCCACTGTG...GAGAATATGGGGCCAGTGTAGCTGTCGCCAGGGTTCTGGGAGCTCCCTGTGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215798.10
ENST00000382363.8
CDS-3UTR GCA 90 bp TGGACATGGTGGGGCCCTCATCCTTCCTCCCACCCACTGGGCTTGCTGTCCTGTGGGTCCATCCCCATGTaGAGAGTCCAGCTGGGCAGC +
Preference number: 4 (lower is better)
Translates to: WTWWGPHPSSHPLGLLSCGSIPM*RVQLGS
Trigger: GCTGCCCAGCTGGACTCTGCACATGGGGATGGACCC...ACAGGACAGCAAGCCCAGTGGGTGGGAGGAAGGATGAGGGCCCCACCATGTCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000215798.10
ENST00000382363.8
CDS-3UTR GCA 90 bp CTAGAGGCCGTCCACCTTCCTTGCCATGGGGCTCCCTCCATTGGGCTTGCTGTCGGGTCCATCCCCATGTaGAGAGTCCAGCTGGGCAGC +
Preference number: 4 (lower is better)
Translates to: LEAVHLPCHGAPSIGLAVGSIPM*RVQLGS
Trigger: GCTGCCCAGCTGGACTCTGCACATGGGGATGGACCC...GACAGCAAGCCCAATGGAGGGAGCCCCATGGCAAGGAAGGTGGACGGCCTCTAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332468.5
ENST00000630264.1
CDS-3UTR GCA 90 bp CCTAGAGGCCGTCCACCTTCCTTGCCATGGGGCTCCCTCCATTGGGCTTGCTGTATGGTGCCAAGGGCATaGTGGGGCTCAGGGCCAGCA +
Preference number: 4 (lower is better)
Translates to: PRGRPPSLPWGSLHWACCMVPRA*WGSGPA
Trigger: TGCTGGCCCTGAGCCCCAGCATGCCCTTGGCACCAT...ACAGCAAGCCCAATGGAGGGAGCCCCATGGCAAGGAAGGTGGACGGCCTCTAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR GCA 90 bp ACTGAGGTCCCCATGTCCTCGCTGGCTGGCTGTAAGCCAGGTCCTCTCACGGCTCTCCGGCCAACTGAGTaGCTGCAGGCCTGTCCCATG +
Preference number: 4 (lower is better)
Translates to: TEVPMSSLAGCKPGPLTALRPTE*LQACPM
Trigger: CATGGGACAGGCCTGCAGGCACTCAGTTGGCCGGAG...AGCCGTGAGAGGACCTGGCTTACAGCCAGCCAGCGAGGACATGGGGACCTCAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR GCA 90 bp GCTGTGGGACTGAGGTCCCCATGTCCTCGCTGGCTGGCTGTAAGCCAGGTCCTCCCAGAAGATGGCCAGTaGCCACTGATGGGAGGCCTG +
Preference number: 4 (lower is better)
Translates to: AVGLRSPCPRWLAVSQVLPEDGQ*PLMGGL
Trigger: CAGGCCTCCCATCAGTGGGCACTGGCCATCTTCTGG...GAGGACCTGGCTTACAGCCAGCCAGCGAGGACATGGGGACCTCAGTCCCACAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR GCA 90 bp GAGGTCCCCATGTCCTCGCTGGCTGGCTGTAAGCCAGGTCCTCTCACGGCTCCTCTGTCAGAGCCTCCCTaGAGTTCCCAGCCACGACCT +
Preference number: 4 (lower is better)
Translates to: EVPMSSLAGCKPGPLTAPLSEPP*SSQPRP
Trigger: AGGTCGTGGCTGGGAACTGCAGGGAGGCTCTGACAG...AGGAGCCGTGAGAGGACCTGGCTTACAGCCAGCCAGCGAGGACATGGGGACCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR CCA 90 bp GGGGTGCAGGCAGGAAGGGTCCATCCCCATGTGCAGAGTCCAGCTGGGCAGCTACCCTTATTCTCCTGGTaGAACTGGGCCGCCTGCTCC +
Preference number: 4 (lower is better)
Translates to: GVQAGRVHPHVQSPAGQLPLFSW*NWAACS
Trigger: GGAGCAGGCGGCCCAGTTCCACCAGGAGAATAAGGG...TAGCTGCCCAGCTGGACTCTGCACATGGGGATGGACCCTTCCTGCCTGCACCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000215798.10
CDS-3UTR CCA 90 bp GTGGACATGGTGGGGCCCTCATCCTTCCTCCCACCCACTGGGCTTGCTGTCCTGCTGTGCACAGGAGCATaGCCACCAGCAGGATGGCGT +
Preference number: 4 (lower is better)
Translates to: VDMVGPSSFLPPTGLAVLLCTGA*PPAGWR
Trigger: ACGCCATCCTGCTGGTGGCCATGCTCCTGTGCACAG...CAGGACAGCAAGCCCAGTGGGTGGGAGGAAGGATGAGGGCCCCACCATGTCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215798.10
ENST00000382363.8
CDS-3UTR CCA 90 bp ACTGAGGTCCCCATGTCCTCGCTGGCTGGCTGTAAGCCAGGTCCTCTCACGGCTCATCCTGTCCTGTCCTaGGAGCCCAGGCTGAGGACC +
Preference number: 4 (lower is better)
Translates to: TEVPMSSLAGCKPGPLTAHPVLS*EPRLRT
Trigger: GGTCCTCAGCCTGGGCTCCCAGGACAGGACAGGATG...AGCCGTGAGAGGACCTGGCTTACAGCCAGCCAGCGAGGACATGGGGACCTCAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332468.5
ENST00000630264.1
CDS-3UTR CCA 90 bp GTGGACATGGTGGGGCCCTCATCCTTCCTCCCACCCACTGGGCTTGCTGTCCTGCCAGTGTGGACATGGTaGGGCCCTCATCCTTCCTCC +
Preference number: 4 (lower is better)
Translates to: VDMVGPSSFLPPTGLAVLPVWTW*GPHPSS
Trigger: GGAGGAAGGATGAGGGCCCCACCATGTCCACACTGG...CAGGACAGCAAGCCCAGTGGGTGGGAGGAAGGATGAGGGCCCCACCATGTCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215798.10
ENST00000382363.8
CDS-3UTR CCA 90 bp GTGGACATGGTGGGGCCCTCATCCTTCCTCCCACCCACTGGGCTTGCTGTCCTGAGGCAGTGGGACCCATaGCTCCCAGTGCTTGAGGAC +
Preference number: 4 (lower is better)
Translates to: VDMVGPSSFLPPTGLAVLRQWDP*LPVLED
Trigger: GTCCTCAAGCACTGGGAGCCATGGGTCCCACTGCCT...CAGGACAGCAAGCCCAGTGGGTGGGAGGAAGGATGAGGGCCCCACCATGTCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215798.10
ENST00000382363.8
CDS-3UTR CCA 90 bp ACTTGTTGGCAGAATTCCGATCCTTGCGGCTGTGGGACTGAGGTCCCCATGTCCGAGAGGGCGGGCCCTTaGGGACCAGGAGGAAGCCCC +
Preference number: 4 (lower is better)
Translates to: TCWQNSDPCGCGTEVPMSERAGP*GPGGSP
Trigger: GGGGCTTCCTCCTGGTCCCCAAGGGCCCGCCCTCTC...GGACATGGGGACCTCAGTCCCACAGCCGCAAGGATCGGAATTCTGCCAACAAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR CCA 90 bp AAGTTCCTGGCACCAGAAGATGGCCAGTGCCCACTGATGGGAGGCCTGAGGGATAGCGGGAGCGGCTGCTaGTGGCCTTCCCAGACCTGC +
Preference number: 4 (lower is better)
Translates to: KFLAPEDGQCPLMGGLRDSGSGC*WPSQTC
Trigger: GCAGGTCTGGGAAGGCCACCAGCAGCCGCTCCCGCT...ATCCCTCAGGCCTCCCATCAGTGGGCACTGGCCATCTTCTGGTGCCAGGAACTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR CCA 90 bp TGTGGGACTGAGGTCCCCATGTCCTCGCTGGCTGGCTGTAAGCCAGGTCCTCTCGGGCCAGCACGGAGCTaGATAAGGAGAAGGCCCGTG +
Preference number: 4 (lower is better)
Translates to: CGTEVPMSSLAGCKPGPLGPARS*IRRRPV
Trigger: CACGGGCCTTCTCCTTATCCAGCTCCGTGCTGGCCC...GAGAGGACCTGGCTTACAGCCAGCCAGCGAGGACATGGGGACCTCAGTCCCACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR CCA 90 bp AGTCACAACAGCCAAACGCAGACACAGGTCTGGTTGTCCCCACAGCCTGTGCTCTCGGCTGGAGGGCGCTaGCCAGCAGGTCTGCTGGGC +
Preference number: 4 (lower is better)
Translates to: SHNSQTQTQVWLSPQPVLSAGGR*PAGLLG
Trigger: GCCCAGCAGACCTGCTGGCCAGCGCCCTCCAGCCGA...GAGCACAGGCTGTGGGGACAACCAGACCTGTGTCTGCGTTTGGCTGTTGTGACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR CCA 90 bp GCGGCTGTGGGACTGAGGTCCCCATGTCCTCGCTGGCTGGCTGTAAGCCAGGTCCTCAAGCCAGGGGTGTaGCTGGATGAGCATCGTCCA +
Preference number: 4 (lower is better)
Translates to: AAVGLRSPCPRWLAVSQVLKPGV*LDEHRP
Trigger: TGGACGATGCTCATCCAGCCACACCCCTGGCTTGAG...GACCTGGCTTACAGCCAGCCAGCGAGGACATGGGGACCTCAGTCCCACAGCCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR CCA 90 bp CTTGCGGCTGTGGGACTGAGGTCCCCATGTCCTCGCTGGCTGGCTGTAAGCCAGGCCAGTTCCAGCAACTaGTGCAGGACAGCATGGGGC +
Preference number: 4 (lower is better)
Translates to: LAAVGLRSPCPRWLAVSQASSSN*CRTAWG
Trigger: GCCCCATGCTGTCCTGCACCAGTTGCTGGAACTGGC...CTGGCTTACAGCCAGCCAGCGAGGACATGGGGACCTCAGTCCCACAGCCGCAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR CCA 90 bp CCTAGAGGCCGTCCACCTTCCTTGCCATGGGGCTCCCTCCATTGGGCTTGCTGTCCATTGAGACGGCCCTaGTGCCCTGTGACGCATGCG +
Preference number: 4 (lower is better)
Translates to: PRGRPPSLPWGSLHWACCPLRRP*CPVTHA
Trigger: CGCATGCGTCACAGGGCACCAGGGCCGTCTCAATGG...ACAGCAAGCCCAATGGAGGGAGCCCCATGGCAAGGAAGGTGGACGGCCTCTAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR CCA 90 bp GACCGGGGTGCAGGCAGGAAGGGTCCATCCCCATGTGCAGAGTCCAGCTGGGCAAAGCCCCACACAGTGTaGCGGTTAAGAACGCAGGCC +
Preference number: 4 (lower is better)
Translates to: DRGAGRKGPSPCAESSWAKPHTV*RLRTQA
Trigger: GGCCTGCGTTCTTAACCGCCACACTGTGTGGGGCTT...TGCCCAGCTGGACTCTGCACATGGGGATGGACCCTTCCTGCCTGCACCCCGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR CCA 90 bp ATCCTGTGGCTTCGAGTATCCCGGTCAGCAACACAAAGCCGCAGCCAAGGATTCCCGGACCCGGCGAGCTaGCCCAACAGTGGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: ILWLRVSRSATQSRSQGFPDPAS*PNSGAR
Trigger: CCTGGCCCCACTGTTGGGCCAGCTCGCCGGGTCCGG...GAATCCTTGGCTGCGGCTTTGTGTTGCTGACCGGGATACTCGAAGCCACAGGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382363.8
CDS-3UTR TCA 90 bp GTGGACATGGTGGGGCCCTCATCCTTCCTCCCACCCACTGGGCTTGCTGTCCTGGTGACCTCTCTTCCTTaGCTGACAGGTCCCAGCCCT +
Preference number: 4 (lower is better)
Translates to: VDMVGPSSFLPPTGLAVLVTSLP*LTGPSP
Trigger: AGGGCTGGGACCTGTCAGTCAAGGAAGAGAGGTCAC...CAGGACAGCAAGCCCAGTGGGTGGGAGGAAGGATGAGGGCCCCACCATGTCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215798.10
ENST00000382363.8
CDS-3UTR TCA 90 bp GCGGCTGTGGGACTGAGGTCCCCATGTCCTCGCTGGCTGGCTGTAAGCCAGGTCGCAGTTAGCTGCTCGTaGGACATCATCCAGGCCCTT +
Preference number: 4 (lower is better)
Translates to: AAVGLRSPCPRWLAVSQVAVSCS*DIIQAL
Trigger: AAGGGCCTGGATGATGTCTCACGAGCAGCTAACTGC...GACCTGGCTTACAGCCAGCCAGCGAGGACATGGGGACCTCAGTCCCACAGCCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR TCA 90 bp CCTCTCACGGCTCCTAGAGGCCGTCCACCTTCCTTGCCATGGGGCTCCCTCCATGGATTGGATATCAGGTaGCCTGGGTTCTCCCAGCCC +
Preference number: 4 (lower is better)
Translates to: PLTAPRGRPPSLPWGSLHGLDIR*PGFSQP
Trigger: GGGCTGGGAGAACCCAGGTCACCTGATATCCAATCC...ATGGAGGGAGCCCCATGGCAAGGAAGGTGGACGGCCTCTAGGAGCCGTGAGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR TCA 90 bp GCTGTGGGACTGAGGTCCCCATGTCCTCGCTGGCTGGCTGTAAGCCAGGTCCTCACAGAGAGTCTACCCTaGACCAGGCACTGGGGGAAC +
Preference number: 4 (lower is better)
Translates to: AVGLRSPCPRWLAVSQVLTESLP*TRHWGN
Trigger: GTTCCCCCAGTGCCTGGTTCAGGGTAGACTCTCTGT...GAGGACCTGGCTTACAGCCAGCCAGCGAGGACATGGGGACCTCAGTCCCACAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR TCA 90 bp ACTGAGGTCCCCATGTCCTCGCTGGCTGGCTGTAAGCCAGGTCCTCTCACGGCTGACTCTCCAAGCTCTTaGTGCCTGGGCCAGTTCCCC +
Preference number: 4 (lower is better)
Translates to: TEVPMSSLAGCKPGPLTADSPSS*CLGQFP
Trigger: GGGGAACTGGCCCAGGCATCAAGAGCTTGGAGAGTC...AGCCGTGAGAGGACCTGGCTTACAGCCAGCCAGCGAGGACATGGGGACCTCAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR GCA 90 bp GACAGGCCACAGGGAGCTCCCAGAACCCTGGCGACAGCTACACTGGCCCCATATAGGCCTGCGGGCCACTaGCCTTATTCTCCTGGTGGA +
Preference number: 4 (lower is better)
Translates to: DRPQGAPRTLATATLAPYRPAGH*PYSPGG
Trigger: TCCACCAGGAGAATAAGGGCAGTGGCCCGCAGGCCT...ATATGGGGCCAGTGTAGCTGTCGCCAGGGTTCTGGGAGCTCCCTGTGGCCTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215798.10
ENST00000382363.8
CDS-3UTR GCA 90 bp CTGGCCACTGTAGTCTCAGCCCCCAGGAATTCCCAGACAGGCCACAGGGAGCTCAGGCCTGCGGGCCACTaGCCTTATTCTCCTGGTGGA +
Preference number: 4 (lower is better)
Translates to: LATVVSAPRNSQTGHRELRPAGH*PYSPGG
Trigger: TCCACCAGGAGAATAAGGGCAGTGGCCCGCAGGCCT...GAGCTCCCTGTGGCCTGTCTGGGAATTCCTGGGGGCTGAGACTACAGTGGCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000215798.10
ENST00000382363.8
CDS-3UTR GCA 90 bp GTGGGACTGAGGTCCCCATGTCCTCGCTGGCTGGCTGTAAGCCAGGTCCTCTCAGGACCCCACCCCTGGTaGTCACCCAGGACGTTGAAT +
Preference number: 4 (lower is better)
Translates to: VGLRSPCPRWLAVSQVLSGPHPW*SPRTLN
Trigger: ATTCAACGTCCTGGGTGAGCACCAGGGGTGGGGTCC...TGAGAGGACCTGGCTTACAGCCAGCCAGCGAGGACATGGGGACCTCAGTCCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR GCA 90 bp GAGGTCCCCATGTCCTCGCTGGCTGGCTGTAAGCCAGGTCCTCTCACGGCTCCTGGAGTAGCGGTTCCCTaGAGGGGAGGGGAAGAAGAA +
Preference number: 4 (lower is better)
Translates to: EVPMSSLAGCKPGPLTAPGVAVP*RGGEEE
Trigger: TTCTTCTTCCCCTCCCCTGCAGGGAACCGCTACTCC...AGGAGCCGTGAGAGGACCTGGCTTACAGCCAGCCAGCGAGGACATGGGGACCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR GCA 90 bp GACCGGGGTGCAGGCAGGAAGGGTCCATCCCCATGTGCAGAGTCCAGCTGGGCACAGAATTCCGATCCTTaGGGCTGTGGGACTGAGGTC +
Preference number: 4 (lower is better)
Translates to: DRGAGRKGPSPCAESSWAQNSDP*GCGTEV
Trigger: GACCTCAGTCCCACAGCCGCAAGGATCGGAATTCTG...TGCCCAGCTGGACTCTGCACATGGGGATGGACCCTTCCTGCCTGCACCCCGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332468.5
ENST00000630264.1
CDS-3UTR GCA 90 bp GCGGCTGTGGGACTGAGGTCCCCATGTCCTCGCTGGCTGGCTGTAAGCCAGGTCCAGAATTCCGATCCTTaGGGCTGTGGGACTGAGGTC +
Preference number: 4 (lower is better)
Translates to: AAVGLRSPCPRWLAVSQVQNSDP*GCGTEV
Trigger: GACCTCAGTCCCACAGCCGCAAGGATCGGAATTCTG...GACCTGGCTTACAGCCAGCCAGCGAGGACATGGGGACCTCAGTCCCACAGCCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332468.5
ENST00000421022.1
ENST00000630264.1
ENST00000631046.2
CDS-3UTR GCA 90 bp GGCCGTCCACCTTCCTTGCCATGGGGCTCCCTCCATCGGGGTGCAGGCAGGAAGAGGCATCTACCAGGTTaGGTTCCTTTCTGCCGGTTC +
Preference number: 4 (lower is better)
Translates to: GRPPSLPWGSLHRGAGRKRHLPG*VPFCRF
Trigger: GAACCGGCAGAAAGGAACGCAACCTGGTAGATGCCT...CTTCCTGCCTGCACCCCGATGGAGGGAGCCCCATGGCAAGGAAGGTGGACGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000631046.2
CDS-3UTR GCA 90 bp CCGATCCTTGCGGCTGTGGGACTGAGGTCCCCATGTCCTCGCTGGCTGGCTGTACTGCCCAAGCTGGTGTaGCTCCCTTCTAAGGTCCTG +
Preference number: 4 (lower is better)
Translates to: PILAAVGLRSPCPRWLAVLPKLV*LPSKVL
Trigger: CAGGACCTTAGAAGGGAGGCACACCAGCTTGGGCAG...TACAGCCAGCCAGCGAGGACATGGGGACCTCAGTCCCACAGCCGCAAGGATCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR GCA 90 bp ACGGACCTGCGGCTAACCATCCTGGAGCTAGAACGGGAGCTGGAGGAGCTGAAGCTGCTCACAGGTCTGTaGCCCAGAGGCCAGACGCCT +
Preference number: 4 (lower is better)
Translates to: TDLRLTILELERELEELKLLTGL*PRGQTP
Trigger: AGGCGTCTGGCCTCTGGGGCACAGACCTGTGAGCAG...CTTCAGCTCCTCCAGCTCCCGTTCTAGCTCCAGGATGGTTAGCCGCAGGTCCGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR CCA 90 bp GGCCACAGGGAGCTCCCAGAACCCTGGCGACAGCTACACTGGCCCCATATTCTCCCCTTATTCTCCTGGTaGAACTGGGCCGCCTGCTCC +
Preference number: 4 (lower is better)
Translates to: GHRELPEPWRQLHWPHILPLFSW*NWAACS
Trigger: GGAGCAGGCGGCCCAGTTCCACCAGGAGAATAAGGG...GAGAATATGGGGCCAGTGTAGCTGTCGCCAGGGTTCTGGGAGCTCCCTGTGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000215798.10
ENST00000382363.8
CDS-3UTR CCA 90 bp AGACAGGCCACAGGGAGCTCCCAGAACCCTGGCGACAGCTACACTGGCCCCATAAGGGGTTTCTGCTCCTaGGCACGACTGCCTCCAAGG +
Preference number: 4 (lower is better)
Translates to: RQATGSSQNPGDSYTGPIRGFCS*ARLPPR
Trigger: CCTTGGAGGCAGTCGTGCCCAGGAGCAGAAACCCCT...TATGGGGCCAGTGTAGCTGTCGCCAGGGTTCTGGGAGCTCCCTGTGGCCTGTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000215798.10
ENST00000382363.8
CDS-3UTR CCA 90 bp CTGGCCACTGTAGTCTCAGCCCCCAGGAATTCCCAGACAGGCCACAGGGAGCTCAGGGGTTTCTGCTCCTaGGCACGACTGCCTCCAAGG +
Preference number: 4 (lower is better)
Translates to: LATVVSAPRNSQTGHRELRGFCS*ARLPPR
Trigger: CCTTGGAGGCAGTCGTGCCCAGGAGCAGAAACCCCT...GAGCTCCCTGTGGCCTGTCTGGGAATTCCTGGGGGCTGAGACTACAGTGGCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000215798.10
ENST00000382363.8
CDS-3UTR CCA 90 bp GGATTCCAGAACAGGACGGTTTCTAAGACCTCTGGTCCTAGCCAGGCCCAGGAAGCCTGCCGCTGGGCCTaGACCACGAGGCCTGTGCAC +
Preference number: 4 (lower is better)
Translates to: GFQNRTVSKTSGPSQAQEACRWA*TTRPVH
Trigger: GTGCACAGGCCTCGTGGTCCAGGCCCAGCGGCAGGC...TTCCTGGGCCTGGCTAGGACCAGAGGTCTTAGAAACCGTCCTGTTCTGGAATCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382363.8
CDS-3UTR CCA 90 bp CTGGCCACTGTAGTCTCAGCCCCCAGGAATTCCCAGACAGGCCACAGGGAGCTCAGGCAGTGGGACCCATaGCTCCCAGTGCTTGAGGAC +
Preference number: 4 (lower is better)
Translates to: LATVVSAPRNSQTGHRELRQWDP*LPVLED
Trigger: GTCCTCAAGCACTGGGAGCCATGGGTCCCACTGCCT...GAGCTCCCTGTGGCCTGTCTGGGAATTCCTGGGGGCTGAGACTACAGTGGCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000215798.10
ENST00000382363.8
CDS-3UTR CCA 90 bp GTCCCCATGTCCTCGCTGGCTGGCTGTAAGCCAGGTCCTCTCACGGCTCCTAGACCAAAATCCGGGAAGTaGCCCAGCAGGGTGGCCTCA +
Preference number: 4 (lower is better)
Translates to: VPMSSLAGCKPGPLTAPRPKSGK*PSRVAS
Trigger: TGAGGCCACCCTGCTGGGCCACTTCCCGGATTTTGG...TCTAGGAGCCGTGAGAGGACCTGGCTTACAGCCAGCCAGCGAGGACATGGGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR CCA 90 bp ACTGAGGTCCCCATGTCCTCGCTGGCTGGCTGTAAGCCAGGTCCTCTCACGGCTAGCAGCTGGACAGCCTaGACCAGGAACGTGAGGAGC +
Preference number: 4 (lower is better)
Translates to: TEVPMSSLAGCKPGPLTASSWTA*TRNVRS
Trigger: GCTCCTCACGTTCCTGGTCCAGGCTGTCCAGCTGCT...AGCCGTGAGAGGACCTGGCTTACAGCCAGCCAGCGAGGACATGGGGACCTCAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR CCA 90 bp CCTCTCACGGCTCCTAGAGGCCGTCCACCTTCCTTGCCATGGGGCTCCCTCCATCTCCTTAGTTCCACATaGCTGGGCCTAGCCCTGTGG +
Preference number: 4 (lower is better)
Translates to: PLTAPRGRPPSLPWGSLHLLSST*LGLALW
Trigger: CCACAGGGCTAGGCCCAGCCATGTGGAACTAAGGAG...ATGGAGGGAGCCCCATGGCAAGGAAGGTGGACGGCCTCTAGGAGCCGTGAGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR CCA 90 bp GCTGTGGGACTGAGGTCCCCATGTCCTCGCTGGCTGGCTGTAAGCCAGGTCCTCACAGCTAGTGAGAGGTaGAGCCAGGACTCCGAGCAG +
Preference number: 4 (lower is better)
Translates to: AVGLRSPCPRWLAVSQVLTASER*SQDSEQ
Trigger: CTGCTCGGAGTCCTGGCTCCACCTCTCACTAGCTGT...GAGGACCTGGCTTACAGCCAGCCAGCGAGGACATGGGGACCTCAGTCCCACAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR CCA 90 bp CCTAGAGGCCGTCCACCTTCCTTGCCATGGGGCTCCCTCCATTGGGCTTGCTGTGGCATAGCTGTGCTCTaGGCAATGGGGCCTCACAGG +
Preference number: 4 (lower is better)
Translates to: PRGRPPSLPWGSLHWACCGIAVL*AMGPHR
Trigger: CCTGTGAGGCCCCATTGCCCAGAGCACAGCTATGCC...ACAGCAAGCCCAATGGAGGGAGCCCCATGGCAAGGAAGGTGGACGGCCTCTAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR CCA 90 bp GTGGGACTGAGGTCCCCATGTCCTCGCTGGCTGGCTGTAAGCCAGGTCCTCTCACACTCTCCTGCCAGATaGCTAAGGGGTGCAGGGAGG +
Preference number: 4 (lower is better)
Translates to: VGLRSPCPRWLAVSQVLSHSPAR*LRGAGR
Trigger: CCTCCCTGCACCCCTTAGCCATCTGGCAGGAGAGTG...TGAGAGGACCTGGCTTACAGCCAGCCAGCGAGGACATGGGGACCTCAGTCCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR CCA 90 bp CACAACAGCCAAACGCAGACACAGGTCTGGTTGTCCCCACAGCCTGTGCTCTTCCGCAGGTGCAGCTGTTaGTGGGTCGGCTGGAGGGCG +
Preference number: 4 (lower is better)
Translates to: HNSQTQTQVWLSPQPVLFRRCSC*WVGWRA
Trigger: CGCCCTCCAGCCGACCCACCAACAGCTGCACCTGCG...GAAGAGCACAGGCTGTGGGGACAACCAGACCTGTGTCTGCGTTTGGCTGTTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR CCA 90 bp TGCGGCTGTGGGACTGAGGTCCCCATGTCCTCGCTGGCTGGCTGTAAGCCAGGTTCTGAGGCCCAGAGATaGGATGTGAGCTCCCGTCCT +
Preference number: 4 (lower is better)
Translates to: CGCGTEVPMSSLAGCKPGSEAQR*DVSSRP
Trigger: AGGACGGGAGCTCACATCCCATCTCTGGGCCTCAGA...ACCTGGCTTACAGCCAGCCAGCGAGGACATGGGGACCTCAGTCCCACAGCCGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR CCA 90 bp CACAGATCACATGGAGAGGCAAGTGCAGTCCAACGACATCCGCATCCGGGTCCTCGCCGGCCAGGTCCATaGGACCCTCTGAAGGGCCTC +
Preference number: 4 (lower is better)
Translates to: HRSHGEASAVQRHPHPGPRRPGP*DPLKGL
Trigger: GAGGCCCTTCAGAGGGTCCCATGGACCTGGCCGGCG...AGGACCCGGATGCGGATGTCGTTGGACTGCACTTGCCTCTCCATGTGATCTGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR CCA 90 bp GAAGCCCCTATCCAGCAGCAGGTCTTCAGACTCTGCCCCGGGAACTTGTGGAGATGGTGCAGGACAGCATaGGGCTCAGGCCACTGCCGG +
Preference number: 4 (lower is better)
Translates to: EAPIQQQVFRLCPGNLWRWCRTA*GSGHCR
Trigger: CCGGCAGTGGCCTGAGCCCCATGCTGTCCTGCACCA...TCTCCACAAGTTCCCGGGGCAGAGTCTGAAGACCTGCTGCTGGATAGGGGCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR CCA 90 bp GAGGCCGTCCACCTTCCTTGCCATGGGGCTCCCTCCATTGGGCTTGCTGTCCTGGAAGCCTGCAGAAGGTaGGCAAGGTGGTCATCAGCC +
Preference number: 4 (lower is better)
Translates to: EAVHLPCHGAPSIGLAVLEACRR*ARWSSA
Trigger: GGCTGATGACCACCTTGCCCACCTTCTGCAGGCTTC...CAGGACAGCAAGCCCAATGGAGGGAGCCCCATGGCAAGGAAGGTGGACGGCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR CCA 90 bp ACTGAGGTCCCCATGTCCTCGCTGGCTGGCTGTAAGCCAGGTCCTCTCACGGCTCACCACAGCCTTTACTaGCTCCCACCGCCCTCCCAA +
Preference number: 4 (lower is better)
Translates to: TEVPMSSLAGCKPGPLTAHHSLY*LPPPSQ
Trigger: TTGGGAGGGCGGTGGGAGCCAGTAAAGGCTGTGGTG...AGCCGTGAGAGGACCTGGCTTACAGCCAGCCAGCGAGGACATGGGGACCTCAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR CCA 90 bp GGCTGTGGGACTGAGGTCCCCATGTCCTCGCTGGCTGGCTGTAAGCCAGGTCCTTCTATCTCCCCACTGTaGTGGCCTTCACACCTCGCC +
Preference number: 4 (lower is better)
Translates to: GCGTEVPMSSLAGCKPGPSISPL*WPSHLA
Trigger: GGCGAGGTGTGAAGGCCACCACAGTGGGGAGATAGA...AGGACCTGGCTTACAGCCAGCCAGCGAGGACATGGGGACCTCAGTCCCACAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR CCA 90 bp GAGCTCCCAGAACCCTGGCGACAGCTACACTGGCCCCATATTCTCTTTCCTTATGAGCTGGCCCAACAGTaGGGCCAGGGGTCCCGGGCG +
Preference number: 4 (lower is better)
Translates to: ELPEPWRQLHWPHILFPYELAQQ*GQGSRA
Trigger: CGCCCGGGACCCCTGGCCCCACTGTTGGGCCAGCTC...ATAAGGAAAGAGAATATGGGGCCAGTGTAGCTGTCGCCAGGGTTCTGGGAGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382363.8
CDS-3UTR TCA 90 bp CTGGGAGCTGCCTGTAAGGAGGGCAGACTCACGTCACAGGATTGCAGAGAAGGTCTTCGGAGCCGATCCTaGCGCCCTCCAGGACCAGAG +
Preference number: 4 (lower is better)
Translates to: LGAACKEGRLTSQDCREGLRSRS*RPPGPE
Trigger: CTCTGGTCCTGGAGGGCGTCAGGATCGGCTCCGAAG...ACCTTCTCTGCAATCCTGTGACGTGAGTCTGCCCTCCTTACAGGCAGCTCCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000215798.10
ENST00000382363.8
CDS-3UTR TCA 90 bp GTCACAGGATTGCAGAGAAGGTCCCAAAGTGACCTCTCTTCCTTGACTGACAGGCCTGGGAGCCCAGGCTaGGGACCGGGGTGCAGGCAG +
Preference number: 4 (lower is better)
Translates to: VTGLQRRSQSDLSSLTDRPGSPG*GPGCRQ
Trigger: CTGCCTGCACCCCGGTCCTCAGCCTGGGCTCCCAGG...CCTGTCAGTCAAGGAAGAGAGGTCACTTTGGGACCTTCTCTGCAATCCTGTGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215798.10
ENST00000382363.8
CDS-3UTR TCA 90 bp GTCCCCATGTCCTCGCTGGCTGGCTGTAAGCCAGGTCCTCTCACGGCTCCTAGATCGGGAGAAGGAAGATaGGCTAGGAGGCCTGGTGCA +
Preference number: 4 (lower is better)
Translates to: VPMSSLAGCKPGPLTAPRSGEGR*ARRPGA
Trigger: TGCACCAGGCCTCCTAGCTCATCTTCCTTCTCCCGA...TCTAGGAGCCGTGAGAGGACCTGGCTTACAGCCAGCCAGCGAGGACATGGGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR TCA 90 bp ATCATCCAGGCCCTTCTGTCCCCTTCTCAACCACCTTGTGAGGCAGGTCATAGCCCTGGACCAGGAACGTaGGGAGCTGCGGGGCAGCCT +
Preference number: 4 (lower is better)
Translates to: IIQALLSPSQPPCEAGHSPGPGT*GAAGQP
Trigger: AGGCTGCCCCGCAGCTCCTCACGTTCCTGGTCCAGG...GCTATGACCTGCCTCACAAGGTGGTTGAGAAGGGGACAGAAGGGCCTGGATGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR TCA 90 bp AGGGCCCGGGGCATAGCTGTGCTCTGGGCAATGGGGCCTCACAGGAGTCCTCAGTTCAGCAACATGGGATaGTGTGACACTGGAGACCCG +
Preference number: 4 (lower is better)
Translates to: RARGIAVLWAMGPHRSPQFSNMG*CDTGDP
Trigger: CGGGTCTCCAGTGTCACATCATCCCATGTTGCTGAA...CTGAGGACTCCTGTGAGGCCCCATTGCCCAGAGCACAGCTATGCCCCGGGCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR TCA 90 bp GCCGTCCACCTTCCTTGCCATGGGGCTCCCTCCATTGGGCTTGCTGTCCTGTCTCCCCACAGGCAAAGATaGGCAGGTGTGCCACACTCT +
Preference number: 4 (lower is better)
Translates to: AVHLPCHGAPSIGLAVLSPHRQR*AGVPHS
Trigger: AGAGTGTGGCACACCTGCTCATCTTTGCCTGTGGGG...AGACAGGACAGCAAGCCCAATGGAGGGAGCCCCATGGCAAGGAAGGTGGACGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR TCA 90 bp TGCGGCTGTGGGACTGAGGTCCCCATGTCCTCGCTGGCTGGCTGTAAGCCAGGTCATCCAGGGCAAAGTTaGAGGGAACCAGCCACAGGA +
Preference number: 4 (lower is better)
Translates to: CGCGTEVPMSSLAGCKPGHPGQS*REPATG
Trigger: TCCTGTGGCTGGTTCCCTTCAACTTTGCCCTGGATG...ACCTGGCTTACAGCCAGCCAGCGAGGACATGGGGACCTCAGTCCCACAGCCGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR TCA 90 bp CTAGAGGCCGTCCACCTTCCTTGCCATGGGGCTCCCTCCATTGGGCTTGCTGTCAGGGGTGTGGCTGGATaGGCATCGTCCATCTCTGTC +
Preference number: 4 (lower is better)
Translates to: LEAVHLPCHGAPSIGLAVRGVAG*ASSISV
Trigger: GACAGAGATGGACGATGCTCATCCAGCCACACCCCT...GACAGCAAGCCCAATGGAGGGAGCCCCATGGCAAGGAAGGTGGACGGCCTCTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR TCA 90 bp ACGGACCTGCGGCTAACCATCCTGGAGCTAGAACGGGAGCTGGAGGAGCTGAAGCCCTGCAGAAGCCCCTaGCTAGCCTCAGGAGACTGT +
Preference number: 4 (lower is better)
Translates to: TDLRLTILELERELEELKPCRSP*LASGDC
Trigger: ACAGTCTCCTGAGGCTAGTCAGGGGCTTCTGCAGGG...CTTCAGCTCCTCCAGCTCCCGTTCTAGCTCCAGGATGGTTAGCCGCAGGTCCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR GCA 90 bp GACAGGCCACAGGGAGCTCCCAGAACCCTGGCGACAGCTACACTGGCCCCATATGTGGCCTGGGTCCTCTaGAGCAATGCATCCAACAGC +
Preference number: 4 (lower is better)
Translates to: DRPQGAPRTLATATLAPYVAWVL*SNASNS
Trigger: GCTGTTGGATGCATTGCTGCAGAGGACCCAGGCCAC...ATATGGGGCCAGTGTAGCTGTCGCCAGGGTTCTGGGAGCTCCCTGTGGCCTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215798.10
ENST00000382363.8
CDS-3UTR GCA 90 bp AGACAGGCCACAGGGAGCTCCCAGAACCCTGGCGACAGCTACACTGGCCCCATAATGGCGTTCCACAGCTaGTGCAGGGGTTTCTGCTCC +
Preference number: 4 (lower is better)
Translates to: RQATGSSQNPGDSYTGPIMAFHS*CRGFCS
Trigger: GGAGCAGAAACCCCTGCAGCAGCTGTGGAACGCCAT...TATGGGGCCAGTGTAGCTGTCGCCAGGGTTCTGGGAGCTCCCTGTGGCCTGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000215798.10
ENST00000382363.8
CDS-3UTR GCA 90 bp TCCCAGAACCCTGGCGACAGCTACACTGGCCCCATATTCTCTTTCCTTATTGACAGCTCCCGCTGGCTCTaGCGCGACGCCTGCCGCTGG +
Preference number: 4 (lower is better)
Translates to: SQNPGDSYTGPIFSFLIDSSRWL*RDACRW
Trigger: CCAGCGGCAGGCGTCGCGGCAGAGCCAGCGGGAGCT...GTCAATAAGGAAAGAGAATATGGGGCCAGTGTAGCTGTCGCCAGGGTTCTGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215798.10
ENST00000382363.8
CDS-3UTR GCA 90 bp GTCACAGGATTGCAGAGAAGGTCCCAAAGTGACCTCTCTTCCTTGACTGACAGGTGGGAGGCCCTGCGCTaGCCTGCTCAGCCGGCAGCG +
Preference number: 4 (lower is better)
Translates to: VTGLQRRSQSDLSSLTDRWEALR*PAQPAA
Trigger: CGCTGCCGGCTGAGCAGGGCAGCGCAGGGCCTCCCA...CCTGTCAGTCAAGGAAGAGAGGTCACTTTGGGACCTTCTCTGCAATCCTGTGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000215798.10
ENST00000382363.8
CDS-3UTR GCA 90 bp TCCCAGAACCCTGGCGACAGCTACACTGGCCCCATATTCTCTTTCCTTATTGACTGGGAGGCCCTGCGCTaGCCTGCTCAGCCGGCAGCG +
Preference number: 4 (lower is better)
Translates to: SQNPGDSYTGPIFSFLIDWEALR*PAQPAA
Trigger: CGCTGCCGGCTGAGCAGGGCAGCGCAGGGCCTCCCA...GTCAATAAGGAAAGAGAATATGGGGCCAGTGTAGCTGTCGCCAGGGTTCTGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215798.10
ENST00000382363.8
CDS-3UTR GCA 90 bp ATGGGGCTCCCTCCATTGGGCTTGCTGTCCTGTCTATCCTGCTGTCCCATCCTGCACAGTGGGCAGGTCTaGTGGAGCATCAGCCAGGGG +
Preference number: 4 (lower is better)
Translates to: MGLPPLGLLSCLSCCPILHSGQV*WSISQG
Trigger: CCCCTGGCTGATGCTCCAGCAGACCTGCCCACTGTG...CAGGATGGGACAGCAGGATAGACAGGACAGCAAGCCCAATGGAGGGAGCCCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332468.5
ENST00000630264.1
CDS-3UTR GCA 90 bp AGACAGGCCACAGGGAGCTCCCAGAACCCTGGCGACAGCTACACTGGCCCCATAGGAGTAGCGGTTCCCTaGAGGGGAGGGGAAGAAGAA +
Preference number: 4 (lower is better)
Translates to: RQATGSSQNPGDSYTGPIGVAVP*RGGEEE
Trigger: TTCTTCTTCCCCTCCCCTGCAGGGAACCGCTACTCC...TATGGGGCCAGTGTAGCTGTCGCCAGGGTTCTGGGAGCTCCCTGTGGCCTGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000215798.10
CDS-3UTR GCA 90 bp GCTGTGGGACTGAGGTCCCCATGTCCTCGCTGGCTGGCTGTAAGCCAGGTCCTCCAGAATTCCGATCCTTaGGGCTGTGGGACTGAGGTC +
Preference number: 4 (lower is better)
Translates to: AVGLRSPCPRWLAVSQVLQNSDP*GCGTEV
Trigger: GACCTCAGTCCCACAGCCGCAAGGATCGGAATTCTG...GAGGACCTGGCTTACAGCCAGCCAGCGAGGACATGGGGACCTCAGTCCCACAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332468.5
ENST00000421022.1
ENST00000630264.1
ENST00000631046.2
CDS-3UTR GCA 90 bp GGCCGTCCACCTTCCTTGCCATGGGGCTCCCTCCATCGGGGTGCAGGCAGGAAGGGTTGCGTTCCTTTCTaGCGGTTCTGGGGAAGAATT +
Preference number: 4 (lower is better)
Translates to: GRPPSLPWGSLHRGAGRKGCVPF*RFWGRI
Trigger: AATTCTTCCCCAGAACCGGCAGAAAGGAACGCAACC...CTTCCTGCCTGCACCCCGATGGAGGGAGCCCCATGGCAAGGAAGGTGGACGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000631046.2
CDS-3UTR GCA 90 bp CTCACGGCTCCTAGAGGCCGTCCACCTTCCTTGCCATGGGGCTCCCTCCATCGGCGCCCACCAACTCCGTaGCATGTATTCATTAGCTCC +
Preference number: 4 (lower is better)
Translates to: LTAPRGRPPSLPWGSLHRRPPTP*HVFISS
Trigger: GGAGCTAATGAATACATGGCACGGAGTTGGTGGGCG...CCGATGGAGGGAGCCCCATGGCAAGGAAGGTGGACGGCCTCTAGGAGCCGTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000631046.2
CDS-3UTR GCA 90 bp CCTGCAGTTCCCAGCCACGACCTTCAAGAACACCAGGAGTGTCCACTCCCAGACCAGGACACTGGGGACTaGAGCTCCCTAGCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: PAVPSHDLQEHQECPLPDQDTGD*SSLACS
Trigger: GCTGCAGGCTAGGGAGCTGCAGTCCCCAGTGTCCTG...GTCTGGGAGTGGACACTCCTGGTGTTCTTGAAGGTCGTGGCTGGGAACTGCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR GCA 90 bp GACACTGGGGACTGCAGCTCCCTAGCCTGCAGCAAGGGTGTTAAAGCCAGGCGGGAGGAGGATGAGCAGTaGCTGTCTGAGTGGGAGCAC +
Preference number: 4 (lower is better)
Translates to: DTGDCSSLACSKGVKARREEDEQ*LSEWEH
Trigger: GTGCTCCCACTCAGACAGGCACTGCTCATCCTCCTC...CCGCCTGGCTTTAACACCCTTGCTGCAGGCTAGGGAGCTGCAGTCCCCAGTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR GCA 90 bp GTGGGACTGAGGTCCCCATGTCCTCGCTGGCTGGCTGTAAGCCAGGTCCTCTCACTGCCCGCAGGCTCCTaGTGCTGCTTCAAAGCTGTA +
Preference number: 4 (lower is better)
Translates to: VGLRSPCPRWLAVSQVLSLPAGS*CCFKAV
Trigger: TACAGCTTTGAAGCAGCAGCAGGAGCCTGCGGGCAG...TGAGAGGACCTGGCTTACAGCCAGCCAGCGAGGACATGGGGACCTCAGTCCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR CCA 90 bp AGACAGGCCACAGGGAGCTCCCAGAACCCTGGCGACAGCTACACTGGCCCCATAATCTCAGCCGTGGCCTaGGTCCTCTGCAGCAATGCA +
Preference number: 4 (lower is better)
Translates to: RQATGSSQNPGDSYTGPIISAVA*VLCSNA
Trigger: TGCATTGCTGCAGAGGACCCAGGCCACGGCTGAGAT...TATGGGGCCAGTGTAGCTGTCGCCAGGGTTCTGGGAGCTCCCTGTGGCCTGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215798.10
ENST00000382363.8
CDS-3UTR CCA 90 bp TCCCAGAACCCTGGCGACAGCTACACTGGCCCCATATTCTCTTTCCTTATTGACCGCGACGCCTGCCGCTaGGCCTGGACCACGAGGCCT +
Preference number: 4 (lower is better)
Translates to: SQNPGDSYTGPIFSFLIDRDACR*AWTTRP
Trigger: AGGCCTCGTGGTCCAGGCCCAGCGGCAGGCGTCGCG...GTCAATAAGGAAAGAGAATATGGGGCCAGTGTAGCTGTCGCCAGGGTTCTGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215798.10
ENST00000382363.8
CDS-3UTR CCA 90 bp AGGGCCCGGGGCATAGCTGTGCTCTGGGCAATGGGGCCTCACAGGAGTCCTCAGTGTGCAGAGTCCAGCTaGGCAGCTAATCATCGGAGT +
Preference number: 4 (lower is better)
Translates to: RARGIAVLWAMGPHRSPQCAESS*AANHRS
Trigger: ACTCCGATGATTAGCTGCCCAGCTGGACTCTGCACA...CTGAGGACTCCTGTGAGGCCCCATTGCCCAGAGCACAGCTATGCCCCGGGCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR CCA 90 bp CTGGCCACTGTAGTCTCAGCCCCCAGGAATTCCCAGACAGGCCACAGGGAGCTCTTCCCAGTGTGGACATaGTGGGGCCCTCATCCTTCC +
Preference number: 4 (lower is better)
Translates to: LATVVSAPRNSQTGHRELFPVWT*WGPHPS
Trigger: GGAAGGATGAGGGCCCCACCATGTCCACACTGGGAA...GAGCTCCCTGTGGCCTGTCTGGGAATTCCTGGGGGCTGAGACTACAGTGGCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000215798.10
ENST00000382363.8
CDS-3UTR CCA 90 bp AGTCACAACAGCCAAACGCAGACACAGGTCTGGTTGTCCCCACAGCCTGTGCTCAGCCTCCTGAGTAGCTaGGACTACGGGGGCCCGCCA +
Preference number: 4 (lower is better)
Translates to: SHNSQTQTQVWLSPQPVLSLLSS*DYGGPP
Trigger: TGGCGGGCCCCCGTAGTCCCAGCTACTCAGGAGGCT...GAGCACAGGCTGTGGGGACAACCAGACCTGTGTCTGCGTTTGGCTGTTGTGACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR CCA 90 bp GGACTGAGGTCCCCATGTCCTCGCTGGCTGGCTGTAAGCCAGGTCCTCTCACGGTTCCCAAGCTTGAGCTaGCCGTGTGACCTTGGACAG +
Preference number: 4 (lower is better)
Translates to: GLRSPCPRWLAVSQVLSRFPSLS*PCDLGQ
Trigger: CTGTCCAAGGTCACACGGCCAGCTCAAGCTTGGGAA...CCGTGAGAGGACCTGGCTTACAGCCAGCCAGCGAGGACATGGGGACCTCAGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR CCA 90 bp AGGGCCCTCGCTAGCCTGGGCATCTGCAATGTAGGCTGCAGGGAAAGAGGGCTCGGATATCAGGTGACCTaGGTTCTCCCAGCCCCTCCA +
Preference number: 4 (lower is better)
Translates to: RALASLGICNVGCRERGLGYQVT*VLPAPP
Trigger: TGGAGGGGCTGGGAGAACCCAGGTCACCTGATATCC...GAGCCCTCTTTCCCTGCAGCCTACATTGCAGATGCCCAGGCTAGCGAGGGCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR CCA 90 bp CTTGCGGCTGTGGGACTGAGGTCCCCATGTCCTCGCTGGCTGGCTGTAAGCCAGCTGTCCTGGACCCCATaGCATAGGAGTGCTAGGTAC +
Preference number: 4 (lower is better)
Translates to: LAAVGLRSPCPRWLAVSQLSWTP*HRSARY
Trigger: GTACCTAGCACTCCTATGCCATGGGGTCCAGGACAG...CTGGCTTACAGCCAGCCAGCGAGGACATGGGGACCTCAGTCCCACAGCCGCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR CCA 90 bp AGTCACAACAGCCAAACGCAGACACAGGTCTGGTTGTCCCCACAGCCTGTGCTCGGCCAGCAGGTCTGCTaGGCCAGCACGGAGCTGGAT +
Preference number: 4 (lower is better)
Translates to: SHNSQTQTQVWLSPQPVLGQQVC*ASTELD
Trigger: ATCCAGCTCCGTGCTGGCCCAGCAGACCTGCTGGCC...GAGCACAGGCTGTGGGGACAACCAGACCTGTGTCTGCGTTTGGCTGTTGTGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR CCA 90 bp AGGGCCCGGGGCATAGCTGTGCTCTGGGCAATGGGGCCTCACAGGAGTCCTCAGAGAGGTGTAGACACATaGCAGCCAGCCCATGAGAAG +
Preference number: 4 (lower is better)
Translates to: RARGIAVLWAMGPHRSPQRGVDT*QPAHEK
Trigger: CTTCTCATGGGCTGGCTGCCATGTGTCTACACCTCT...CTGAGGACTCCTGTGAGGCCCCATTGCCCAGAGCACAGCTATGCCCCGGGCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR CCA 90 bp GACACTGGGGACTGCAGCTCCCTAGCCTGCAGCAAGGGTGTTAAAGCCAGGCGGTGGAAGAACCCAGGCTaGGACACAGGCAAGAGGCAG +
Preference number: 4 (lower is better)
Translates to: DTGDCSSLACSKGVKARRWKNPG*DTGKRQ
Trigger: CTGCCTCTTGCCTGTGTCCCAGCCTGGGTTCTTCCA...CCGCCTGGCTTTAACACCCTTGCTGCAGGCTAGGGAGCTGCAGTCCCCAGTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332468.5
3UTR CAA 72 bp CCTTCAAGAACACCAGGAGTGTCCACTCCCAGACCATaGAGACGGCCCTGGTGCCCTGTGACGCATGCGCCA +
Preference number: 4 (lower is better)
Translates to: PSRTPGVSTPRP*RRPWCPVTHAP
Trigger: TGGCGCATGCGTCACAGGGCACCAGGGCCGTCTCAATGGTCTGGGAGTGGACACTCCTGGTGTTCTTGAAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR TCA 90 bp GACAGGCCACAGGGAGCTCCCAGAACCCTGGCGACAGCTACACTGGCCCCATATGGACGATCACTGGCCTaGGCAGAAGCTGGGATATGT +
Preference number: 4 (lower is better)
Translates to: DRPQGAPRTLATATLAPYGRSLA*AEAGIC
Trigger: ACATATCCCAGCTTCTGCTCAGGCCAGTGATCGTCC...ATATGGGGCCAGTGTAGCTGTCGCCAGGGTTCTGGGAGCTCCCTGTGGCCTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215798.10
ENST00000382363.8
CDS-3UTR TCA 90 bp AGTATCCCGGTCAGCAACACAAAGCCGCAGCCAAGGATTCCAGAACAGGACGGTGGCAGCGCCGTGTCTTaGGGGATGCCAGTCTCCGCA +
Preference number: 4 (lower is better)
Translates to: SIPVSNTKPQPRIPEQDGGSAVS*GMPVSA
Trigger: TGCGGAGACTGGCATCCCTCAAGACACGGCGCTGCC...ACCGTCCTGTTCTGGAATCCTTGGCTGCGGCTTTGTGTTGCTGACCGGGATACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382363.8
CDS-3UTR TCA 90 bp GACAGGCCACAGGGAGCTCCCAGAACCCTGGCGACAGCTACACTGGCCCCATATTCCACACAGTCTCGGTaGAACTCGTGCTTACAGGGC +
Preference number: 4 (lower is better)
Translates to: DRPQGAPRTLATATLAPYSTQSR*NSCLQG
Trigger: GCCCTGTAAGCACGAGTTTCACCGAGACTGTGTGGA...ATATGGGGCCAGTGTAGCTGTCGCCAGGGTTCTGGGAGCTCCCTGTGGCCTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215798.10
ENST00000382363.8
CDS-3UTR TCA 90 bp TGGACATGGTGGGGCCCTCATCCTTCCTCCCACCCACTGGGCTTGCTGTCCTGTCCTCTCTTCCTTGACTaGCAGGTCCCAGCCCTAGAT +
Preference number: 4 (lower is better)
Translates to: WTWWGPHPSSHPLGLLSCPLFLD*QVPALD
Trigger: ATCTAGGGCTGGGACCTGTCAGTCAAGGAAGAGAGG...ACAGGACAGCAAGCCCAGTGGGTGGGAGGAAGGATGAGGGCCCCACCATGTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215798.10
ENST00000382363.8
CDS-3UTR TCA 90 bp ACTTGTTGGCAGAATTCCGATCCTTGCGGCTGTGGGACTGAGGTCCCCATGTCCGGTGCCCCAGGGCGCTaGGTACCATGTAGCTCACTC +
Preference number: 4 (lower is better)
Translates to: TCWQNSDPCGCGTEVPMSGAPGR*VPCSSL
Trigger: GAGTGAGCTACATGGTACTCAGCGCCCTGGGGCACC...GGACATGGGGACCTCAGTCCCACAGCCGCAAGGATCGGAATTCTGCCAACAAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR TCA 90 bp GTCCCCATGTCCTCGCTGGCTGGCTGTAAGCCAGGTCCTCTCACGGCTCCTAGAACCCTTCCACGCATGTaGCCAGCATTCCCTAGACAC +
Preference number: 4 (lower is better)
Translates to: VPMSSLAGCKPGPLTAPRTLPRM*PAFPRH
Trigger: GTGTCTAGGGAATGCTGGTCACATGCGTGGAAGGGT...TCTAGGAGCCGTGAGAGGACCTGGCTTACAGCCAGCCAGCGAGGACATGGGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR TCA 90 bp AGTCACAACAGCCAAACGCAGACACAGGTCTGGTTGTCCCCACAGCCTGTGCTCCTGGGATCCTGGCCTTaGCCAGGTCCGGTGTGCATC +
Preference number: 4 (lower is better)
Translates to: SHNSQTQTQVWLSPQPVLLGSWP*PGPVCI
Trigger: GATGCACACCGGACCTGGTCAAGGCCAGGATCCCAG...GAGCACAGGCTGTGGGGACAACCAGACCTGTGTCTGCGTTTGGCTGTTGTGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR TCA 90 bp CCTCTCACGGCTCCTAGAGGCCGTCCACCTTCCTTGCCATGGGGCTCCCTCCATACAACGGAGGTCATGTaGCCCCTGTTTGTTATGGGC +
Preference number: 4 (lower is better)
Translates to: PLTAPRGRPPSLPWGSLHTTEVM*PLFVMG
Trigger: GCCCATAACAAACAGGGGTCACATGACCTCCGTTGT...ATGGAGGGAGCCCCATGGCAAGGAAGGTGGACGGCCTCTAGGAGCCGTGAGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR TCA 90 bp CTGGCCACTGTAGTCTCAGCCCCCAGGAATTCCCAGACAGGCCACAGGGAGCTCAAGGATGCCCCTGGATaGGGCACCACATTGATCCTG +
Preference number: 4 (lower is better)
Translates to: LATVVSAPRNSQTGHRELKDAPG*GTTLIL
Trigger: CAGGATCAATGTGGTGCCTCATCCAGGGGCATCCTT...GAGCTCCCTGTGGCCTGTCTGGGAATTCCTGGGGGCTGAGACTACAGTGGCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000382363.8
CDS-3UTR GCA 90 bp TGGACATGGTGGGGCCCTCATCCTTCCTCCCACCCACTGGGCTTGCTGTCCTGTCTCCTTGCCCACGTATaGCACTGCAATCCAGCCTTC +
Preference number: 4 (lower is better)
Translates to: WTWWGPHPSSHPLGLLSCLLAHV*HCNPAF
Trigger: GAAGGCTGGATTGCAGTGGCATACGTGGGCAAGGAG...ACAGGACAGCAAGCCCAGTGGGTGGGAGGAAGGATGAGGGCCCCACCATGTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215798.10
ENST00000382363.8
CDS-3UTR GCA 90 bp TCCCAGAACCCTGGCGACAGCTACACTGGCCCCATATTCTCTTTCCTTATTGACGGATCTGGGAGGCCCTaGGCTGCCCTGCTCAGCCGG +
Preference number: 4 (lower is better)
Translates to: SQNPGDSYTGPIFSFLIDGSGRP*AALLSR
Trigger: CCGGCTGAGCAGGGCAGCGCAGGGCCTCCCAGATCC...GTCAATAAGGAAAGAGAATATGGGGCCAGTGTAGCTGTCGCCAGGGTTCTGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215798.10
ENST00000382363.8
CDS-3UTR GCA 90 bp ACTTGTTGGCAGAATTCCGATCCTTGCGGCTGTGGGACTGAGGTCCCCATGTCCGGGTCCATCCCCATGTaGAGAGTCCAGCTGGGCAGC +
Preference number: 4 (lower is better)
Translates to: TCWQNSDPCGCGTEVPMSGSIPM*RVQLGS
Trigger: GCTGCCCAGCTGGACTCTGCACATGGGGATGGACCC...GGACATGGGGACCTCAGTCCCACAGCCGCAAGGATCGGAATTCTGCCAACAAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332468.5
ENST00000630264.1
ENST00000631046.2
CDS-3UTR GCA 90 bp TGTGGGACTGAGGTCCCCATGTCCTCGCTGGCTGGCTGTAAGCCAGGTCCTCTCCAGAATTCCGATCCTTaGGGCTGTGGGACTGAGGTC +
Preference number: 4 (lower is better)
Translates to: CGTEVPMSSLAGCKPGPLQNSDP*GCGTEV
Trigger: GACCTCAGTCCCACAGCCGCAAGGATCGGAATTCTG...GAGAGGACCTGGCTTACAGCCAGCCAGCGAGGACATGGGGACCTCAGTCCCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332468.5
ENST00000421022.1
ENST00000630264.1
ENST00000631046.2
CDS-3UTR GCA 90 bp TGTGGGACTGAGGTCCCCATGTCCTCGCTGGCTGGCTGTAAGCCAGGTCCTCTCCAGGTCTTCAGACTCTaGCCCGGGAACTTGTGGAGA +
Preference number: 4 (lower is better)
Translates to: CGTEVPMSSLAGCKPGPLQVFRL*PGNLWR
Trigger: TCTCCACAAGTTCCCGGGGCAGAGTCTGAAGACCTG...GAGAGGACCTGGCTTACAGCCAGCCAGCGAGGACATGGGGACCTCAGTCCCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR GCA 90 bp TGCGGCTGTGGGACTGAGGTCCCCATGTCCTCGCTGGCTGGCTGTAAGCCAGGTTATGGTCATCTTCCCTaGAGGTTGGGGGACAGGGAA +
Preference number: 4 (lower is better)
Translates to: CGCGTEVPMSSLAGCKPGYGHLP*RLGDRE
Trigger: TTCCCTGTCCCCCAACCTGCAGGGAAGATGACCATA...ACCTGGCTTACAGCCAGCCAGCGAGGACATGGGGACCTCAGTCCCACAGCCGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR GCA 90 bp AGGGCCCTCGCTAGCCTGGGCATCTGCAATGTAGGCTGCAGGGAAAGAGGGCTCTGCAGCTCCCTAGCCTaGAGCAAGGGTGTTAAAGCC +
Preference number: 4 (lower is better)
Translates to: RALASLGICNVGCRERGLCSSLA*SKGVKA
Trigger: GGCTTTAACACCCTTGCTGCAGGCTAGGGAGCTGCA...GAGCCCTCTTTCCCTGCAGCCTACATTGCAGATGCCCAGGCTAGCGAGGGCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR GCA 90 bp TCACAACAGCCAAACGCAGACACAGGTCTGGTTGTCCCCACAGCCTGTGCTCTTTGGCCTTCCCAGACCTaGACAGGCCCACCGAGACCC +
Preference number: 4 (lower is better)
Translates to: SQQPNADTGLVVPTACALWPSQT*TGPPRP
Trigger: GGGTCTCGGTGGGCCTGTGCAGGTCTGGGAAGGCCA...AAGAGCACAGGCTGTGGGGACAACCAGACCTGTGTCTGCGTTTGGCTGTTGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR GCA 90 bp CTTGCGGCTGTGGGACTGAGGTCCCCATGTCCTCGCTGGCTGGCTGTAAGCCAGCTGCTTGTCCGTTCCTaGTTAGTCTCTGCAGGCCAA +
Preference number: 4 (lower is better)
Translates to: LAAVGLRSPCPRWLAVSQLLVRS*LVSAGQ
Trigger: TTGGCCTGCAGAGACTAAGCAGGAACGGACAAGCAG...CTGGCTTACAGCCAGCCAGCGAGGACATGGGGACCTCAGTCCCACAGCCGCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR GCA 90 bp GAGGTCCCCATGTCCTCGCTGGCTGGCTGTAAGCCAGGTCCTCTCACGGCTCCTCCGAGGGGTAGTAGATaGTGTAGCCTCCTTAGTTCC +
Preference number: 4 (lower is better)
Translates to: EVPMSSLAGCKPGPLTAPPRGSR*CSLLSS
Trigger: GGAACTAAGGAGGCTACAGCATCTACTACCCCTCGG...AGGAGCCGTGAGAGGACCTGGCTTACAGCCAGCCAGCGAGGACATGGGGACCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR GCA 90 bp CCTCTCACGGCTCCTAGAGGCCGTCCACCTTCCTTGCCATGGGGCTCCCTCCATCATGTATCAGGTGTCTaGTGTGACCCAGGCTTCAGG +
Preference number: 4 (lower is better)
Translates to: PLTAPRGRPPSLPWGSLHHVSGV*CDPGFR
Trigger: CCTGAAGCCTGGGTCACAGCAGACACCTGATACATG...ATGGAGGGAGCCCCATGGCAAGGAAGGTGGACGGCCTCTAGGAGCCGTGAGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR GCA 90 bp GAGGTCCCCATGTCCTCGCTGGCTGGCTGTAAGCCAGGTCCTCTCACGGCTCCTCTGTTCTCTGTGCCTTaGAAACTGTCACAGCCGCCA +
Preference number: 4 (lower is better)
Translates to: EVPMSSLAGCKPGPLTAPLFSVP*KLSQPP
Trigger: TGGCGGCTGTGACAGTTTGCAAGGCACAGAGAACAG...AGGAGCCGTGAGAGGACCTGGCTTACAGCCAGCCAGCGAGGACATGGGGACCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR GCA 90 bp GGACTGAGGTCCCCATGTCCTCGCTGGCTGGCTGTAAGCCAGGTCCTCTCACGGTCTACCCCAAGTGGGTaGTGTTCTCTGTGCCTTGCA +
Preference number: 4 (lower is better)
Translates to: GLRSPCPRWLAVSQVLSRSTPSG*CSLCLA
Trigger: TGCAAGGCACAGAGAACAGCACCCACTTGGGGTAGA...CCGTGAGAGGACCTGGCTTACAGCCAGCCAGCGAGGACATGGGGACCTCAGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR GCA 90 bp CTCCCTGCTCTGCCCTATCAATGTGTGTCTGTGGGCAAGCTCTTCCCCTCTCTGAGTTGGAGGCGCAGGTaGAGCTGTTGGTGGGTCGGC +
Preference number: 4 (lower is better)
Translates to: LPALPYQCVSVGKLFPSLSWRRR*SCWWVG
Trigger: GCCGACCCACCAACAGCTGCACCTGCGCCTCCAACT...CAGAGAGGGGAAGAGCTTGCCCACAGACACACATTGATAGGGCAGAGCAGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR GCA 90 bp CAAGGCCAGGCCTGGCTTCACAGAGCTCCCTGGTCCAGTGGAGAAGAGCCAGGCGAGCCTCATCACAGTTaGCTCCATGGACGACACCAA +
Preference number: 4 (lower is better)
Translates to: QGQAWLHRAPWSSGEEPGEPHHS*LHGRHQ
Trigger: TTGGTGTCGTCCATGGAGGCAACTGTGATGAGGCTC...GCCTGGCTCTTCTCCACTGGACCAGGGAGCTCTGTGAAGCCAGGCCTGGCCTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR GCA 90 bp TCCCCATGTCCTCGCTGGCTGGCTGTAAGCCAGGTCCTCTCACGGCTCCTAGAGAGTTCCAGCAACTGGTaGAGGACAGCATGGGGCTCA +
Preference number: 4 (lower is better)
Translates to: SPCPRWLAVSQVLSRLLESSSNW*RTAWGS
Trigger: TGAGCCCCATGCTGTCCTGCACCAGTTGCTGGAACT...CTCTAGGAGCCGTGAGAGGACCTGGCTTACAGCCAGCCAGCGAGGACATGGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR GCA 90 bp ACTTGTTGGCAGAATTCCGATCCTTGCGGCTGTGGGACTGAGGTCCCCATGTCCCTCCCTCCATCGGGGTaGAGGCAGGAAGGGTCCATC +
Preference number: 4 (lower is better)
Translates to: TCWQNSDPCGCGTEVPMSLPPSG*RQEGSI
Trigger: GATGGACCCTTCCTGCCTGCACCCCGATGGAGGGAG...GGACATGGGGACCTCAGTCCCACAGCCGCAAGGATCGGAATTCTGCCAACAAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000631046.2
CDS-3UTR CCA 90 bp TCCCAGAACCCTGGCGACAGCTACACTGGCCCCATATTCTCTTTCCTTATTGACGCCTGCCGCTGGGCCTaGACCACGAGGCCTGTGCAC +
Preference number: 4 (lower is better)
Translates to: SQNPGDSYTGPIFSFLIDACRWA*TTRPVH
Trigger: GTGCACAGGCCTCGTGGTCCAGGCCCAGCGGCAGGC...GTCAATAAGGAAAGAGAATATGGGGCCAGTGTAGCTGTCGCCAGGGTTCTGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215798.10
ENST00000382363.8
CDS-3UTR CCA 90 bp AGTCACAACAGCCAAACGCAGACACAGGTCTGGTTGTCCCCACAGCCTGTGCTCAGTGGGCAGGTCTGCTaGAGCATCAGCCAGGGGTCC +
Preference number: 4 (lower is better)
Translates to: SHNSQTQTQVWLSPQPVLSGQVC*SISQGS
Trigger: GGACCCCTGGCTGATGCTCCAGCAGACCTGCCCACT...GAGCACAGGCTGTGGGGACAACCAGACCTGTGTCTGCGTTTGGCTGTTGTGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR CCA 90 bp AGTCACAACAGCCAAACGCAGACACAGGTCTGGTTGTCCCCACAGCCTGTGCTCCATCCTGTCCTGTCCTaGGAGCCCAGGCTGAGGACC +
Preference number: 4 (lower is better)
Translates to: SHNSQTQTQVWLSPQPVLHPVLS*EPRLRT
Trigger: GGTCCTCAGCCTGGGCTCCCAGGACAGGACAGGATG...GAGCACAGGCTGTGGGGACAACCAGACCTGTGTCTGCGTTTGGCTGTTGTGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR CCA 90 bp CTGGCCACTGTAGTCTCAGCCCCCAGGAATTCCCAGACAGGCCACAGGGAGCTCCTTCCTCCCACCCACTaGGCTTGCTGTCCTGTCTAT +
Preference number: 4 (lower is better)
Translates to: LATVVSAPRNSQTGHRELLPPTH*ACCPVY
Trigger: ATAGACAGGACAGCAAGCCCAGTGGGTGGGAGGAAG...GAGCTCCCTGTGGCCTGTCTGGGAATTCCTGGGGGCTGAGACTACAGTGGCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000215798.10
ENST00000382363.8
CDS-3UTR CCA 90 bp GACCGGGGTGCAGGCAGGAAGGGTCCATCCCCATGTGCAGAGTCCAGCTGGGCACTTTCCTTATTGACCTaGGAGCTGCCTGTAAGGAGG +
Preference number: 4 (lower is better)
Translates to: DRGAGRKGPSPCAESSWALSLLT*ELPVRR
Trigger: CCTCCTTACAGGCAGCTCCCAGGTCAATAAGGAAAG...TGCCCAGCTGGACTCTGCACATGGGGATGGACCCTTCCTGCCTGCACCCCGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000215798.10
ENST00000382363.8
CDS-3UTR CCA 90 bp AGGACTCAGGATACAACTGAGGCAAGGCCAGGCCTGGCTTCACAGAGCTCCCTGCCACCTTCCTTGCCATaGGGCTCCCTCCATTGGGCT +
Preference number: 4 (lower is better)
Translates to: RTQDTTEARPGLASQSSLPPSLP*GSLHWA
Trigger: AGCCCAATGGAGGGAGCCCCATGGCAAGGAAGGTGG...CAGGGAGCTCTGTGAAGCCAGGCCTGGCCTTGCCTCAGTTGTATCCTGAGTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR CCA 90 bp ACGGACCTGCGGCTAACCATCCTGGAGCTAGAACGGGAGCTGGAGGAGCTGAAGTGCCCCGGGAACTTGTaGAGAGCCCACCTCATCACA +
Preference number: 4 (lower is better)
Translates to: TDLRLTILELERELEELKCPGNL*RAHLIT
Trigger: TGTGATGAGGTGGGCTCTCCACAAGTTCCCGGGGCA...CTTCAGCTCCTCCAGCTCCCGTTCTAGCTCCAGGATGGTTAGCCGCAGGTCCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR CCA 90 bp TGTTGGCAGAATTCCGATCCTTGCGGCTGTGGGACTGAGGTCCCCATGTCCTCGAGGGGAAGAGCAGCCTaGCGGAATTCCTGCCGTTCC +
Preference number: 4 (lower is better)
Translates to: CWQNSDPCGCGTEVPMSSRGRAA*RNSCRS
Trigger: GGAACGGCAGGAATTCCGCCAGGCTGCTCTTCCCCT...CGAGGACATGGGGACCTCAGTCCCACAGCCGCAAGGATCGGAATTCTGCCAACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR CCA 90 bp GAGGTCCCCATGTCCTCGCTGGCTGGCTGTAAGCCAGGTCCTCTCACGGCTCCTCCTTTCTACCCCAAGTaGGTGCTGTTCTCTGTGCCT +
Preference number: 4 (lower is better)
Translates to: EVPMSSLAGCKPGPLTAPPFYPK*VLFSVP
Trigger: AGGCACAGAGAACAGCACCCACTTGGGGTAGAAAGG...AGGAGCCGTGAGAGGACCTGGCTTACAGCCAGCCAGCGAGGACATGGGGACCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR CCA 90 bp CCTGCAGTTCCCAGCCACGACCTTCAAGAACACCAGGAGTGTCCACTCCCAGACCTGTGCTCTGGGCAATaGGGCCTCACAGGAGTCCTC +
Preference number: 4 (lower is better)
Translates to: PAVPSHDLQEHQECPLPDLCSGQ*GLTGVL
Trigger: GAGGACTCCTGTGAGGCCCCATTGCCCAGAGCACAG...GTCTGGGAGTGGACACTCCTGGTGTTCTTGAAGGTCGTGGCTGGGAACTGCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR CCA 90 bp GAGCCAGCCATCTGCGTTCCAAGGGCCGGGGTCTTCAAGCTGGGATCCTGGCCTAGAAGGTGGGCAAGGTaGTCATCAGCCTGTGTCAGA +
Preference number: 4 (lower is better)
Translates to: EPAICVPRAGVFKLGSWPRRWAR*SSACVR
Trigger: TCTGACACAGGCTGATGACCACCTTGCCCACCTTCT...AGGCCAGGATCCCAGCTTGAAGACCCCGGCCCTTGGAACGCAGATGGCTGGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR CCA 90 bp CACAGATCACATGGAGAGGCAAGTGCAGTCCAACGACATCCGCATCCGGGTCCTAGGCAAGGCCAGGCCTaGCTTCACAGAGCTCCCTGG +
Preference number: 4 (lower is better)
Translates to: HRSHGEASAVQRHPHPGPRQGQA*LHRAPW
Trigger: CCAGGGAGCTCTGTGAAGCCAGGCCTGGCCTTGCCT...AGGACCCGGATGCGGATGTCGTTGGACTGCACTTGCCTCTCCATGTGATCTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR TCA 90 bp ATGGGGCTCCCTCCATTGGGCTTGCTGTCCTGTCTATCCTGCTGTCCCATCCTGGCTCACCCAGGACGTTaGATTTGCACAGTGGGCAGG +
Preference number: 4 (lower is better)
Translates to: MGLPPLGLLSCLSCCPILAHPGR*ICTVGR
Trigger: CCTGCCCACTGTGCAAATTCAACGTCCTGGGTGAGC...CAGGATGGGACAGCAGGATAGACAGGACAGCAAGCCCAATGGAGGGAGCCCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR TCA 90 bp GACCGGGGTGCAGGCAGGAAGGGTCCATCCCCATGTGCAGAGTCCAGCTGGGCACATTTCCAGAAGGCGTaGGGATGTTATGGATCCGAT +
Preference number: 4 (lower is better)
Translates to: DRGAGRKGPSPCAESSWAHFQKA*GCYGSD
Trigger: ATCGGATCCATAACATCCTCACGCCTTCTGGAAATG...TGCCCAGCTGGACTCTGCACATGGGGATGGACCCTTCCTGCCTGCACCCCGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR TCA 90 bp GTCACAACAGCCAAACGCAGACACAGGTCTGGTTGTCCCCACAGCCTGTGCTCTTGCCGTTCCCAAGCTTaGGCTGGCCGTGTGACCTTG +
Preference number: 4 (lower is better)
Translates to: VTTAKRRHRSGCPHSLCSCRSQA*AGRVTL
Trigger: CAAGGTCACACGGCCAGCTCAAGCTTGGGAACGGCA...AGAGCACAGGCTGTGGGGACAACCAGACCTGTGTCTGCGTTTGGCTGTTGTGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332468.5
ENST00000619645.1
CDS-3UTR TCA 90 bp CTCAGGTGGGTCAGCCTCAGCCTCTATCTCCCCACTGTGGTGGCCTTCACACCTACTGATACTGCCCAGTaGGGCCTCACTCTGGAAGAG +
Preference number: 4 (lower is better)
Translates to: LRWVSLSLYLPTVVAFTPTDTAQ*GLTLEE
Trigger: CTCTTCCAGAGTGAGGCCTCACTGGGCAGTATCAGT...AGGTGTGAAGGCCACCACAGTGGGGAGATAGAGGCTGAGGCTGACCCACCTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR TCA 90 bp CCTCCCTGCAGTTCCCAGCCACGACCTTCAAGAACACCAGGAGTGTCCACTCCCAGCAGAGGAAAGACCTaGCGCGCCTCAGTAAGCATG +
Preference number: 4 (lower is better)
Translates to: PPCSSQPRPSRTPGVSTPSRGKT*RASVSM
Trigger: CATGCTTACTGAGGCGCGTCAGGTCTTTCCTCTGCT...GGGAGTGGACACTCCTGGTGTTCTTGAAGGTCGTGGCTGGGAACTGCAGGGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR TCA 90 bp GTATTCATTAGCTCCCAGTTCTGGCAGTCAGAAGTCCAGGTTCTGTGTGGCTGGTCTGGGACAGCCTGCTaGGGCTGGGCACGCTCCACC +
Preference number: 4 (lower is better)
Translates to: VFISSQFWQSEVQVLCGWSGTAC*GWARST
Trigger: GGTGGAGCGTGCCCAGCCTCAGCAGGCTGTCCCAGA...CCAGCCACACAGAACCTGGACTTCTGACTGCCAGAACTGGGAGCTAATGAATAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR TCA 90 bp GCCTCCCTGCTTGTCCGTTCCTGCTTAGTCTCTGCAGGCCAAGCAGCGAGCCCTTGCGGTTGTATGGTCTaGGGGTATGTTAGCACCAGC +
Preference number: 4 (lower is better)
Translates to: ASLLVRSCLVSAGQAASPCGCMV*GYVSTS
Trigger: GCTGGTGCTAACATACCCTCAGACCATACAACCGCA...AGGGCTCGCTGCTTGGCCTGCAGAGACTAAGCAGGAACGGACAAGCAGGGAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR GCA 90 bp CTGGGAGCTGCCTGTAAGGAGGGCAGACTCACGTCACAGGATTGCAGAGAAGGTTCCACTGGTGCCTCCTaGTCGGCATCCACGATGTCC +
Preference number: 4 (lower is better)
Translates to: LGAACKEGRLTSQDCREGSTGAS*SASTMS
Trigger: GGACATCGTGGATGCCGAGCAGGAGGCACCAGTGGA...ACCTTCTCTGCAATCCTGTGACGTGAGTCTGCCCTCCTTACAGGCAGCTCCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000215798.10
ENST00000382363.8
CDS-3UTR GCA 90 bp ATCCTGTGGCTTCGAGTATCCCGGTCAGCAACACAAAGCCGCAGCCAAGGATTCCCAGCCTTCCACTGGTaGCTCCTGCTCGGCATCCAC +
Preference number: 4 (lower is better)
Translates to: ILWLRVSRSATQSRSQGFPAFHW*LLLGIH
Trigger: GTGGATGCCGAGCAGGAGGCACCAGTGGAAGGCTGG...GAATCCTTGGCTGCGGCTTTGTGTTGCTGACCGGGATACTCGAAGCCACAGGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382363.8
CDS-3UTR GCA 90 bp GGATTCCAGAACAGGACGGTTTCTAAGACCTCTGGTCCTAGCCAGGCCCAGGAAGGGCCGCCTGCTCCTTaGCCACGTATGCCACTGCAA +
Preference number: 4 (lower is better)
Translates to: GFQNRTVSKTSGPSQAQEGPPAP*PRMPLQ
Trigger: TTGCAGTGGCATACGTGGGCAAGGAGCAGGCGGCCC...TTCCTGGGCCTGGCTAGGACCAGAGGTCTTAGAAACCGTCCTGTTCTGGAATCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382363.8
CDS-3UTR GCA 90 bp GACAGGCCACAGGGAGCTCCCAGAACCCTGGCGACAGCTACACTGGCCCCATATGGTCCTCTGCAGCAATaGATCCAACAGCTTGGTGAC +
Preference number: 4 (lower is better)
Translates to: DRPQGAPRTLATATLAPYGPLQQ*IQQLGD
Trigger: GTCACCAAGCTGTTGGATGCATTGCTGCAGAGGACC...ATATGGGGCCAGTGTAGCTGTCGCCAGGGTTCTGGGAGCTCCCTGTGGCCTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215798.10
ENST00000382363.8
CDS-3UTR GCA 90 bp GATTCCAGAACAGGACGGTTTCTAAGACCTCTGGTCCTAGCCAGGCCCAGGAAGGGACCACGAGGCCTGTaGACAGGAGCATGGCCACCA +
Preference number: 4 (lower is better)
Translates to: DSRTGRFLRPLVLARPRKGPRGL*TGAWPP
Trigger: TGGTGGCCATGCTCCTGTGCACAGGCCTCGTGGTCC...CTTCCTGGGCCTGGCTAGGACCAGAGGTCTTAGAAACCGTCCTGTTCTGGAATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382363.8
CDS-3UTR GCA 90 bp GGATTCCAGAACAGGACGGTTTCTAAGACCTCTGGTCCTAGCCAGGCCCAGGAACCGTGTCTTGAGGGATaGCAGTCTCCGCACCACGCG +
Preference number: 4 (lower is better)
Translates to: GFQNRTVSKTSGPSQAQEPCLEG*QSPHHA
Trigger: CGCGTGGTGCGGAGACTGGCATCCCTCAAGACACGG...TTCCTGGGCCTGGCTAGGACCAGAGGTCTTAGAAACCGTCCTGTTCTGGAATCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382363.8
CDS-3UTR GCA 90 bp ACTGAGGTCCCCATGTCCTCGCTGGCTGGCTGTAAGCCAGGTCCTCTCACGGCTAGGCATCTACCAGGTTaGGTTCCTTTCTGCCGGTTC +
Preference number: 4 (lower is better)
Translates to: TEVPMSSLAGCKPGPLTARHLPG*VPFCRF
Trigger: GAACCGGCAGAAAGGAACGCAACCTGGTAGATGCCT...AGCCGTGAGAGGACCTGGCTTACAGCCAGCCAGCGAGGACATGGGGACCTCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332468.5
ENST00000421022.1
ENST00000630264.1
ENST00000631046.2
CDS-3UTR GCA 90 bp TCCCCATGTCCTCGCTGGCTGGCTGTAAGCCAGGTCCTCTCACGGCTCCTAGAGAGGCATCTACCAGGTTaGGTTCCTTTCTGCCGGTTC +
Preference number: 4 (lower is better)
Translates to: SPCPRWLAVSQVLSRLLERHLPG*VPFCRF
Trigger: GAACCGGCAGAAAGGAACGCAACCTGGTAGATGCCT...CTCTAGGAGCCGTGAGAGGACCTGGCTTACAGCCAGCCAGCGAGGACATGGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332468.5
ENST00000630264.1
ENST00000631046.2
CDS-3UTR GCA 90 bp TCCCCATGTCCTCGCTGGCTGGCTGTAAGCCAGGTCCTCTCACGGCTCCTAGAGCGCCCACCAACTCCGTaGCATGTATTCATTAGCTCC +
Preference number: 4 (lower is better)
Translates to: SPCPRWLAVSQVLSRLLERPPTP*HVFISS
Trigger: GGAGCTAATGAATACATGGCACGGAGTTGGTGGGCG...CTCTAGGAGCCGTGAGAGGACCTGGCTTACAGCCAGCCAGCGAGGACATGGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332468.5
ENST00000630264.1
ENST00000631046.2
CDS-3UTR GCA 90 bp GACACTGGGGACTGCAGCTCCCTAGCCTGCAGCAAGGGTGTTAAAGCCAGGCGGGCGCACGCTCCCAAATaGCTGAAGCATTTTCCCTTG +
Preference number: 4 (lower is better)
Translates to: DTGDCSSLACSKGVKARRAHAPK*LKHFPL
Trigger: CAAGGGAAAATGCTTCAGGCATTTGGGAGCGTGCGC...CCGCCTGGCTTTAACACCCTTGCTGCAGGCTAGGGAGCTGCAGTCCCCAGTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR GCA 90 bp GAAGCCCCTATCCAGCAGCAGGTCTTCAGACTCTGCCCCGGGAACTTGTGGAGATTCCTGCTTAGTCTCTaGAGGCCAAGCAGCGAGCCC +
Preference number: 4 (lower is better)
Translates to: EAPIQQQVFRLCPGNLWRFLLSL*RPSSEP
Trigger: GGGCTCGCTGCTTGGCCTGCAGAGACTAAGCAGGAA...TCTCCACAAGTTCCCGGGGCAGAGTCTGAAGACCTGCTGCTGGATAGGGGCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR GCA 90 bp GGCTGTGGGACTGAGGTCCCCATGTCCTCGCTGGCTGGCTGTAAGCCAGGTCCTTCTATATTGGGCATCTaGTCCCTGAGATGCCTCCAG +
Preference number: 4 (lower is better)
Translates to: GCGTEVPMSSLAGCKPGPSILGI*SLRCLQ
Trigger: CTGGAGGCATCTCAGGGAGCAGATGCCCAATATAGA...AGGACCTGGCTTACAGCCAGCCAGCGAGGACATGGGGACCTCAGTCCCACAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR GCA 90 bp GACACTGGGGACTGCAGCTCCCTAGCCTGCAGCAAGGGTGTTAAAGCCAGGCGGATCTGCAATGTAGGCTaGAGGGAAAGAGGGCTCCAC +
Preference number: 4 (lower is better)
Translates to: DTGDCSSLACSKGVKARRICNVG*RERGLH
Trigger: GTGGAGCCCTCTTTCCCTGCAGCCTACATTGCAGAT...CCGCCTGGCTTTAACACCCTTGCTGCAGGCTAGGGAGCTGCAGTCCCCAGTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR GCA 90 bp TCATTAGCTCCCAGTTCTGGCAGTCAGAAGTCCAGGTTCTGTGTGGCTGGGTTTGCTGGCCAGCAGGTCTaGTGGGCCAGCACGGAGCTG +
Preference number: 4 (lower is better)
Translates to: SLAPSSGSQKSRFCVAGFAGQQV*WASTEL
Trigger: CAGCTCCGTGCTGGCCCAGCAGACCTGCTGGCCAGC...AAACCCAGCCACACAGAACCTGGACTTCTGACTGCCAGAACTGGGAGCTAATGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR GCA 90 bp CCTAGAGGCCGTCCACCTTCCTTGCCATGGGGCTCCCTCCATTGGGCTTGCTGTGCACACTCCCTGCTCTaGCCTATCAATGTGTGTCTG +
Preference number: 4 (lower is better)
Translates to: PRGRPPSLPWGSLHWACCAHSLL*PINVCL
Trigger: CAGACACACATTGATAGGGCAGAGCAGGGAGTGTGC...ACAGCAAGCCCAATGGAGGGAGCCCCATGGCAAGGAAGGTGGACGGCCTCTAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR CCA 90 bp GGATTCCAGAACAGGACGGTTTCTAAGACCTCTGGTCCTAGCCAGGCCCAGGAATTCTCCTGGTGGAACTaGGCCGCCTGCTCCTTGCCC +
Preference number: 4 (lower is better)
Translates to: GFQNRTVSKTSGPSQAQEFSWWN*AACSLP
Trigger: GGGCAAGGAGCAGGCGGCCCAGTTCCACCAGGAGAA...TTCCTGGGCCTGGCTAGGACCAGAGGTCTTAGAAACCGTCCTGTTCTGGAATCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382363.8
CDS-3UTR CCA 90 bp AGTATCCCGGTCAGCAACACAAAGCCGCAGCCAAGGATTCCAGAACAGGACGGTAGTGGGCAGGTCTGCTaGAGCATCAGCCAGGGGTCC +
Preference number: 4 (lower is better)
Translates to: SIPVSNTKPQPRIPEQDGSGQVC*SISQGS
Trigger: GGACCCCTGGCTGATGCTCCAGCAGACCTGCCCACT...ACCGTCCTGTTCTGGAATCCTTGGCTGCGGCTTTGTGTTGCTGACCGGGATACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382363.8
CDS-3UTR CCA 90 bp GCTCTCTCAGGCGCCCACCAACTCCGTGCCATGTATTCATTAGCTCCCAGTTCTAGTGGGCAGGTCTGCTaGAGCATCAGCCAGGGGTCC +
Preference number: 4 (lower is better)
Translates to: ALSGAHQLRAMYSLAPSSSGQVC*SISQGS
Trigger: GGACCCCTGGCTGATGCTCCAGCAGACCTGCCCACT...AGAACTGGGAGCTAATGAATACATGGCACGGAGTTGGTGGGCGCCTGAGAGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332468.5
ENST00000630264.1
ENST00000631046.2
CDS-3UTR CCA 90 bp GGCCACAGGGAGCTCCCAGAACCCTGGCGACAGCTACACTGGCCCCATATTCTCTGTGCAGAGTCCAGCTaGGCAGCTAATCATCGGAGT +
Preference number: 4 (lower is better)
Translates to: GHRELPEPWRQLHWPHILCAESS*AANHRS
Trigger: ACTCCGATGATTAGCTGCCCAGCTGGACTCTGCACA...GAGAATATGGGGCCAGTGTAGCTGTCGCCAGGGTTCTGGGAGCTCCCTGTGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215798.10
ENST00000382363.8
CDS-3UTR CCA 90 bp ACTGAGGTCCCCATGTCCTCGCTGGCTGGCTGTAAGCCAGGTCCTCTCACGGCTTGTGCAGAGTCCAGCTaGGCAGCTAATCATCGGAGT +
Preference number: 4 (lower is better)
Translates to: TEVPMSSLAGCKPGPLTACAESS*AANHRS
Trigger: ACTCCGATGATTAGCTGCCCAGCTGGACTCTGCACA...AGCCGTGAGAGGACCTGGCTTACAGCCAGCCAGCGAGGACATGGGGACCTCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332468.5
ENST00000630264.1
ENST00000631046.2
CDS-3UTR CCA 90 bp GATTCCAGAACAGGACGGTTTCTAAGACCTCTGGTCCTAGCCAGGCCCAGGAAGGAGCTCCCAGAACCCTaGCGACAGCTACACTGGCCC +
Preference number: 4 (lower is better)
Translates to: DSRTGRFLRPLVLARPRKELPEP*RQLHWP
Trigger: GGGCCAGTGTAGCTGTCGCCAGGGTTCTGGGAGCTC...CTTCCTGGGCCTGGCTAGGACCAGAGGTCTTAGAAACCGTCCTGTTCTGGAATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382363.8
CDS-3UTR CCA 90 bp CCTGCAGGCCTGTCCCATGTCTTTTCTTGGGTAGGGACGGTGCCCCAGGGCGCTCCTTTCTGCCGGTTCTaGGGAAGAATTGGCTTCCAA +
Preference number: 4 (lower is better)
Translates to: PAGLSHVFSWVGTVPQGAPFCRF*GRIGFQ
Trigger: TTGGAAGCCAATTCTTCCCCAGAACCGGCAGAAAGG...AGCGCCCTGGGGCACCGTCCCTACCCAAGAAAAGACATGGGACAGGCCTGCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR CCA 90 bp CCGATCCTTGCGGCTGTGGGACTGAGGTCCCCATGTCCTCGCTGGCTGGCTGTACCTTTCTGCCGGTTCTaGGGAAGAATTGGCTTCCAA +
Preference number: 4 (lower is better)
Translates to: PILAAVGLRSPCPRWLAVPFCRF*GRIGFQ
Trigger: TTGGAAGCCAATTCTTCCCCAGAACCGGCAGAAAGG...TACAGCCAGCCAGCGAGGACATGGGGACCTCAGTCCCACAGCCGCAAGGATCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332468.5
ENST00000421022.1
ENST00000630264.1
ENST00000631046.2
CDS-3UTR CCA 90 bp GAGGTCCCCATGTCCTCGCTGGCTGGCTGTAAGCCAGGTCCTCTCACGGCTCCTCCTTTCTGCCGGTTCTaGGGAAGAATTGGCTTCCAA +
Preference number: 4 (lower is better)
Translates to: EVPMSSLAGCKPGPLTAPPFCRF*GRIGFQ
Trigger: TTGGAAGCCAATTCTTCCCCAGAACCGGCAGAAAGG...AGGAGCCGTGAGAGGACCTGGCTTACAGCCAGCCAGCGAGGACATGGGGACCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332468.5
ENST00000630264.1
ENST00000631046.2
CDS-3UTR CCA 90 bp GTCCTCTCACGGCTCCTAGAGGCCGTCCACCTTCCTTGCCATGGGGCTCCCTCCATTAGCTCCCAGTTCTaGCAGTCAGAAGTCCAGGTT +
Preference number: 4 (lower is better)
Translates to: VLSRLLEAVHLPCHGAPSISSQF*QSEVQV
Trigger: AACCTGGACTTCTGACTGCCAGAACTGGGAGCTAAT...GGAGGGAGCCCCATGGCAAGGAAGGTGGACGGCCTCTAGGAGCCGTGAGAGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332468.5
ENST00000630264.1
ENST00000631046.2
CDS-3UTR CCA 90 bp CTAGAGGCCGTCCACCTTCCTTGCCATGGGGCTCCCTCCATTGGGCTTGCTGTCGGCGTGAGGATGTTATaGATCCGATGCCTTCCAGTC +
Preference number: 4 (lower is better)
Translates to: LEAVHLPCHGAPSIGLAVGVRML*IRCLPV
Trigger: GACTGGAAGGCATCGGATCCATAACATCCTCACGCC...GACAGCAAGCCCAATGGAGGGAGCCCCATGGCAAGGAAGGTGGACGGCCTCTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR CCA 90 bp ACTTGTTGGCAGAATTCCGATCCTTGCGGCTGTGGGACTGAGGTCCCCATGTCCGCCACCTGCCCAAGCTaGTGTGCCTCCCTTCTAAGG +
Preference number: 4 (lower is better)
Translates to: TCWQNSDPCGCGTEVPMSATCPS*CASLLR
Trigger: CCTTAGAAGGGAGGCACACCAGCTTGGGCAGGTGGC...GGACATGGGGACCTCAGTCCCACAGCCGCAAGGATCGGAATTCTGCCAACAAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR CCA 90 bp AGTCACAACAGCCAAACGCAGACACAGGTCTGGTTGTCCCCACAGCCTGTGCTCAGGGGAAGAGCAGCCTaGCGGAATTCCTGCCGTTCC +
Preference number: 4 (lower is better)
Translates to: SHNSQTQTQVWLSPQPVLRGRAA*RNSCRS
Trigger: GGAACGGCAGGAATTCCGCCAGGCTGCTCTTCCCCT...GAGCACAGGCTGTGGGGACAACCAGACCTGTGTCTGCGTTTGGCTGTTGTGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332468.5
ENST00000619645.1
CDS-3UTR CCA 90 bp TGCGGCTGTGGGACTGAGGTCCCCATGTCCTCGCTGGCTGGCTGTAAGCCAGGTTGGGCTTCAGCAACATaGGATGATGTGACACTGGAG +
Preference number: 4 (lower is better)
Translates to: CGCGTEVPMSSLAGCKPGWASAT*DDVTLE
Trigger: CTCCAGTGTCACATCATCCCATGTTGCTGAAGCCCA...ACCTGGCTTACAGCCAGCCAGCGAGGACATGGGGACCTCAGTCCCACAGCCGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR CCA 90 bp GAGGTCCCCATGTCCTCGCTGGCTGGCTGTAAGCCAGGTCCTCTCACGGCTCCTTGGCCACATCTGCCATaGGAATCCAGAATGGCTTCT +
Preference number: 4 (lower is better)
Translates to: EVPMSSLAGCKPGPLTAPWPHLP*ESRMAS
Trigger: AGAAGCCATTCTGGATTCCCATGGCAGATGTGGCCA...AGGAGCCGTGAGAGGACCTGGCTTACAGCCAGCCAGCGAGGACATGGGGACCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR CCA 90 bp AGTCACAACAGCCAAACGCAGACACAGGTCTGGTTGTCCCCACAGCCTGTGCTCCAATCAGATCAAGCCTaGAGCTTGGGGTGCGGGCCG +
Preference number: 4 (lower is better)
Translates to: SHNSQTQTQVWLSPQPVLQSDQA*SLGCGP
Trigger: CGGCCCGCACCCCAAGCTCCAGGCTTGATCTGATTG...GAGCACAGGCTGTGGGGACAACCAGACCTGTGTCTGCGTTTGGCTGTTGTGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR CCA 90 bp CTCAGGCGCCCACCAACTCCGTGCCATGTATTCATTAGCTCCCAGTTCTGGCAGATCTCCCCACTGTGGTaGCCTTCACACCTCGCCCCA +
Preference number: 4 (lower is better)
Translates to: LRRPPTPCHVFISSQFWQISPLW*PSHLAP
Trigger: TGGGGCGAGGTGTGAAGGCCACCACAGTGGGGAGAT...CTGCCAGAACTGGGAGCTAATGAATACATGGCACGGAGTTGGTGGGCGCCTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR CCA 90 bp GCTCTCTCAGGCGCCCACCAACTCCGTGCCATGTATTCATTAGCTCCCAGTTCTCCACCTTCCTTGCCATaGGGCTCCCTCCATCGGGGT +
Preference number: 4 (lower is better)
Translates to: ALSGAHQLRAMYSLAPSSPPSLP*GSLHRG
Trigger: ACCCCGATGGAGGGAGCCCCATGGCAAGGAAGGTGG...AGAACTGGGAGCTAATGAATACATGGCACGGAGTTGGTGGGCGCCTGAGAGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000631046.2
CDS-3UTR TCA 90 bp TCCAGAACAGGACGGTTTCTAAGACCTCTGGTCCTAGCCAGGCCCAGGAAGGGACCTAGATCCTCAGTCTaGAGCTGTGGGGCCCTCCTT +
Preference number: 4 (lower is better)
Translates to: SRTGRFLRPLVLARPRKGPRSSV*SCGALL
Trigger: AAGGAGGGCCCCACAGCTTCAGACTGAGGATCTAGG...TCCCTTCCTGGGCCTGGCTAGGACCAGAGGTCTTAGAAACCGTCCTGTTCTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215798.10
ENST00000382363.8
CDS-3UTR TCA 90 bp CTGGGAGCTGCCTGTAAGGAGGGCAGACTCACGTCACAGGATTGCAGAGAAGGTGTGACCTCTCTTCCTTaGCTGACAGGTCCCAGCCCT +
Preference number: 4 (lower is better)
Translates to: LGAACKEGRLTSQDCREGVTSLP*LTGPSP
Trigger: AGGGCTGGGACCTGTCAGTCAAGGAAGAGAGGTCAC...ACCTTCTCTGCAATCCTGTGACGTGAGTCTGCCCTCCTTACAGGCAGCTCCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000215798.10
ENST00000382363.8
CDS-3UTR TCA 90 bp ACTGAGGTCCCCATGTCCTCGCTGGCTGGCTGTAAGCCAGGTCCTCTCACGGCTGGCCATGTATATAGCTaGGCTACCACAGCTTTGGTC +
Preference number: 4 (lower is better)
Translates to: TEVPMSSLAGCKPGPLTAGHVYS*ATTALV
Trigger: GACCAAAGCTGTGGTAGCTCAGCTATATACATGGCC...AGCCGTGAGAGGACCTGGCTTACAGCCAGCCAGCGAGGACATGGGGACCTCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR TCA 90 bp GTCTCAGGTGGGTCAGCCTCAGCCTCTATCTCCCCACTGTGGTGGCCTTCACACAGCATTTTCCCTTGGTaGAGAGGCCGTCAGGTAGAG +
Preference number: 4 (lower is better)
Translates to: VSGGSASASISPLWWPSHSIFPW*RGRQVE
Trigger: CTCTACCTGACGGCCTCTTCACCAAGGGAAAATGCT...GTGTGAAGGCCACCACAGTGGGGAGATAGAGGCTGAGGCTGACCCACCTGAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR TCA 90 bp AGTCACAACAGCCAAACGCAGACACAGGTCTGGTTGTCCCCACAGCCTGTGCTCGGATTGGATATCAGGTaGCCTGGGTTCTCCCAGCCC +
Preference number: 4 (lower is better)
Translates to: SHNSQTQTQVWLSPQPVLGLDIR*PGFSQP
Trigger: GGGCTGGGAGAACCCAGGTCACCTGATATCCAATCC...GAGCACAGGCTGTGGGGACAACCAGACCTGTGTCTGCGTTTGGCTGTTGTGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332468.5
ENST00000619645.1
CDS-3UTR TCA 90 bp CTCCCTGCTCTGCCCTATCAATGTGTGTCTGTGGGCAAGCTCTTCCCCTCTCTGCCCTGGAGAGAGAACTaGAACAGCAGCGGGAGTCCA +
Preference number: 4 (lower is better)
Translates to: LPALPYQCVSVGKLFPSLPWREN*NSSGSP
Trigger: TGGACTCCCGCTGCTGTTTCAGTTCTCTCTCCAGGG...CAGAGAGGGGAAGAGCTTGCCCACAGACACACATTGATAGGGCAGAGCAGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR TCA 90 bp ACGGACCTGCGGCTAACCATCCTGGAGCTAGAACGGGAGCTGGAGGAGCTGAAGGGGATTTGCCCTTTCTaGGCCTCATCACAGTTGCCT +
Preference number: 4 (lower is better)
Translates to: TDLRLTILELERELEELKGICPF*ASSQLP
Trigger: AGGCAACTGTGATGAGGCTCAGAAAGGGCAAATCCC...CTTCAGCTCCTCCAGCTCCCGTTCTAGCTCCAGGATGGTTAGCCGCAGGTCCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR GCA 90 bp ATCCTGTGGCTTCGAGTATCCCGGTCAGCAACACAAAGCCGCAGCCAAGGATTCTCCACTGGTGCCTCCTaGTCGGCATCCACGATGTCC +
Preference number: 4 (lower is better)
Translates to: ILWLRVSRSATQSRSQGFSTGAS*SASTMS
Trigger: GGACATCGTGGATGCCGAGCAGGAGGCACCAGTGGA...GAATCCTTGGCTGCGGCTTTGTGTTGCTGACCGGGATACTCGAAGCCACAGGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382363.8
CDS-3UTR GCA 90 bp GGCAGACTCACGTCACAGGATTGCAGAGAAGGTCCCAAAGTGACCTCTCTTCCTTGGAACTGGGCCGCCTaGTCCTTGCCCACGTATGCC +
Preference number: 4 (lower is better)
Translates to: GRLTSQDCREGPKVTSLPWNWAA*SLPTYA
Trigger: GGCATACGTGGGCAAGGAGCAGGCGGCCCAGTTCCA...AGGAAGAGAGGTCACTTTGGGACCTTCTCTGCAATCCTGTGACGTGAGTCTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000215798.10
ENST00000382363.8
CDS-3UTR GCA 90 bp GGATTCCAGAACAGGACGGTTTCTAAGACCTCTGGTCCTAGCCAGGCCCAGGAAGCGTTCCACAGCTGCTaGAGGGGTTTCTGCTCCTGG +
Preference number: 4 (lower is better)
Translates to: GFQNRTVSKTSGPSQAQEAFHSC*RGFCSW
Trigger: CCAGGAGCAGAAACCCCTGCAGCAGCTGTGGAACGC...TTCCTGGGCCTGGCTAGGACCAGAGGTCTTAGAAACCGTCCTGTTCTGGAATCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382363.8
CDS-3UTR GCA 90 bp AGACAGGCCACAGGGAGCTCCCAGAACCCTGGCGACAGCTACACTGGCCCCATACTCACGTCACAGGATTaGAGAGAAGGTCCCAAAGTG +
Preference number: 4 (lower is better)
Translates to: RQATGSSQNPGDSYTGPILTSQD*REGPKV
Trigger: CACTTTGGGACCTTCTCTGCAATCCTGTGACGTGAG...TATGGGGCCAGTGTAGCTGTCGCCAGGGTTCTGGGAGCTCCCTGTGGCCTGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215798.10
ENST00000382363.8
CDS-3UTR GCA 90 bp ACTGAGGTCCCCATGTCCTCGCTGGCTGGCTGTAAGCCAGGTCCTCTCACGGCTGGTTGCGTTCCTTTCTaGCGGTTCTGGGGAAGAATT +
Preference number: 4 (lower is better)
Translates to: TEVPMSSLAGCKPGPLTAGCVPF*RFWGRI
Trigger: AATTCTTCCCCAGAACCGGCAGAAAGGAACGCAACC...AGCCGTGAGAGGACCTGGCTTACAGCCAGCCAGCGAGGACATGGGGACCTCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332468.5
ENST00000421022.1
ENST00000630264.1
ENST00000631046.2
CDS-3UTR GCA 90 bp CACAGATCACATGGAGAGGCAAGTGCAGTCCAACGACATCCGCATCCGGGTCCTGAGCCAGAAGGCCTGTaGTCAAGTCCAGGGGAAGGA +
Preference number: 4 (lower is better)
Translates to: HRSHGEASAVQRHPHPGPEPEGL*SSPGEG
Trigger: TCCTTCCCCTGGACTTGAGCACAGGCCTTCTGGCTC...AGGACCCGGATGCGGATGTCGTTGGACTGCACTTGCCTCTCCATGTGATCTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR GCA 90 bp CCTTCCTTGCCATGGGGCTCCCTCCATTGGGCTTGCTGTCCTGTCTATCCTGCTGCTAGCCTGGGCATCTaGAATGTAGGCTGCAGGGAA +
Preference number: 4 (lower is better)
Translates to: PSLPWGSLHWACCPVYPAASLGI*NVGCRE
Trigger: TTCCCTGCAGCCTACATTGCAGATGCCCAGGCTAGC...AGCAGGATAGACAGGACAGCAAGCCCAATGGAGGGAGCCCCATGGCAAGGAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR CCA 90 bp TGGACATGGTGGGGCCCTCATCCTTCCTCCCACCCACTGGGCTTGCTGTCCTGTTCTCGGACCACGTTGTaGTTCAGGATGAGAAGAAGC +
Preference number: 4 (lower is better)
Translates to: WTWWGPHPSSHPLGLLSCSRTTL*FRMRRS
Trigger: GCTTCTTCTCATCCTGAACCACAACGTGGTCCGAGA...ACAGGACAGCAAGCCCAGTGGGTGGGAGGAAGGATGAGGGCCCCACCATGTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215798.10
ENST00000382363.8
CDS-3UTR CCA 90 bp TCCAGAACAGGACGGTTTCTAAGACCTCTGGTCCTAGCCAGGCCCAGGAAGGGACTCCATAGCCATCCTTaGAGAGGCCACAGGTGGTCC +
Preference number: 4 (lower is better)
Translates to: SRTGRFLRPLVLARPRKGLHSHP*RGHRWS
Trigger: GGACCACCTGTGGCCTCTCCAAGGATGGCTATGGAG...TCCCTTCCTGGGCCTGGCTAGGACCAGAGGTCTTAGAAACCGTCCTGTTCTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000215798.10
ENST00000382363.8
CDS-3UTR CCA 90 bp GGATTCCAGAACAGGACGGTTTCTAAGACCTCTGGTCCTAGCCAGGCCCAGGAATGGCCACCAGCAGGATaGCGTTCCACAGCTGCTGCA +
Preference number: 4 (lower is better)
Translates to: GFQNRTVSKTSGPSQAQEWPPAG*RSTAAA
Trigger: TGCAGCAGCTGTGGAACGCCATCCTGCTGGTGGCCA...TTCCTGGGCCTGGCTAGGACCAGAGGTCTTAGAAACCGTCCTGTTCTGGAATCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382363.8
CDS-3UTR CCA 90 bp GAGCTCCCAGAACCCTGGCGACAGCTACACTGGCCCCATATTCTCTTTCCTTATAGTGGGCAGGTCTGCTaGAGCATCAGCCAGGGGTCC +
Preference number: 4 (lower is better)
Translates to: ELPEPWRQLHWPHILFPYSGQVC*SISQGS
Trigger: GGACCCCTGGCTGATGCTCCAGCAGACCTGCCCACT...ATAAGGAAAGAGAATATGGGGCCAGTGTAGCTGTCGCCAGGGTTCTGGGAGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000215798.10
ENST00000382363.8
CDS-3UTR CCA 90 bp GGCAGACTCACGTCACAGGATTGCAGAGAAGGTCCCAAAGTGACCTCTCTTCCTGGAAGGGAGCCAGGCTaGACAGGCAGTGGGACCCAT +
Preference number: 4 (lower is better)
Translates to: GRLTSQDCREGPKVTSLPGREPG*TGSGTH
Trigger: ATGGGTCCCACTGCCTGTCCAGCCTGGCTCCCTTCC...AGGAAGAGAGGTCACTTTGGGACCTTCTCTGCAATCCTGTGACGTGAGTCTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000215798.10
ENST00000382363.8
CDS-3UTR CCA 90 bp ATGGGGCTCCCTCCATTGGGCTTGCTGTCCTGTCTATCCTGCTGTCCCATCCTGTGGGGCTCCCTCCATTaGGCTTGCTGTCCTGTCTAT +
Preference number: 4 (lower is better)
Translates to: MGLPPLGLLSCLSCCPILWGSLH*ACCPVY
Trigger: ATAGACAGGACAGCAAGCCCAATGGAGGGAGCCCCA...CAGGATGGGACAGCAGGATAGACAGGACAGCAAGCCCAATGGAGGGAGCCCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332468.5
ENST00000630264.1
CDS-3UTR CCA 90 bp GTGGGACTGAGGTCCCCATGTCCTCGCTGGCTGGCTGTAAGCCAGGTCCTCTCACCAAGCTCCACTTGTTaGCAGAATTCCGATCCTTGC +
Preference number: 4 (lower is better)
Translates to: VGLRSPCPRWLAVSQVLSPSSTC*QNSDPC
Trigger: GCAAGGATCGGAATTCTGCCAACAAGTGGAGCTTGG...TGAGAGGACCTGGCTTACAGCCAGCCAGCGAGGACATGGGGACCTCAGTCCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332468.5
ENST00000421022.1
ENST00000630264.1
ENST00000631046.2
CDS-3UTR CCA 90 bp CCTCTCACGGCTCCTAGAGGCCGTCCACCTTCCTTGCCATGGGGCTCCCTCCATGTTCTGGGGAAGAATTaGCTTCCAAGCTCCACTTGT +
Preference number: 4 (lower is better)
Translates to: PLTAPRGRPPSLPWGSLHVLGKN*LPSSTC
Trigger: ACAAGTGGAGCTTGGAAGCCAATTCTTCCCCAGAAC...ATGGAGGGAGCCCCATGGCAAGGAAGGTGGACGGCCTCTAGGAGCCGTGAGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332468.5
ENST00000630264.1
ENST00000631046.2
CDS-3UTR CCA 90 bp GTCCCCATGTCCTCGCTGGCTGGCTGTAAGCCAGGTCCTCTCACGGCTCCTAGACCTTTCTGCCGGTTCTaGGGAAGAATTGGCTTCCAA +
Preference number: 4 (lower is better)
Translates to: VPMSSLAGCKPGPLTAPRPFCRF*GRIGFQ
Trigger: TTGGAAGCCAATTCTTCCCCAGAACCGGCAGAAAGG...TCTAGGAGCCGTGAGAGGACCTGGCTTACAGCCAGCCAGCGAGGACATGGGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332468.5
ENST00000630264.1
ENST00000631046.2
CDS-3UTR CCA 90 bp GGACTGAGGTCCCCATGTCCTCGCTGGCTGGCTGTAAGCCAGGTCCTCTCACGGATTAGCTCCCAGTTCTaGCAGTCAGAAGTCCAGGTT +
Preference number: 4 (lower is better)
Translates to: GLRSPCPRWLAVSQVLSRISSQF*QSEVQV
Trigger: AACCTGGACTTCTGACTGCCAGAACTGGGAGCTAAT...CCGTGAGAGGACCTGGCTTACAGCCAGCCAGCGAGGACATGGGGACCTCAGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332468.5
ENST00000421022.1
ENST00000630264.1
ENST00000631046.2
CDS-3UTR CCA 90 bp GAGGTCCCCATGTCCTCGCTGGCTGGCTGTAAGCCAGGTCCTCTCACGGCTCCTATTAGCTCCCAGTTCTaGCAGTCAGAAGTCCAGGTT +
Preference number: 4 (lower is better)
Translates to: EVPMSSLAGCKPGPLTAPISSQF*QSEVQV
Trigger: AACCTGGACTTCTGACTGCCAGAACTGGGAGCTAAT...AGGAGCCGTGAGAGGACCTGGCTTACAGCCAGCCAGCGAGGACATGGGGACCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332468.5
ENST00000630264.1
ENST00000631046.2
CDS-3UTR CCA 90 bp GGCAGAATTCCGATCCTTGCGGCTGTGGGACTGAGGTCCCCATGTCCTCGCTGGACGTCACAGATCACATaGAGAGGCAAGTGCAGTCCA +
Preference number: 4 (lower is better)
Translates to: GRIPILAAVGLRSPCPRWTSQIT*RGKCSP
Trigger: TGGACTGCACTTGCCTCTCCATGTGATCTGTGACGT...CCAGCGAGGACATGGGGACCTCAGTCCCACAGCCGCAAGGATCGGAATTCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR CCA 90 bp CACAACAGCCAAACGCAGACACAGGTCTGGTTGTCCCCACAGCCTGTGCTCTTCATTCTCCCGGGCTCCTaGAGCCAGAAGGAAGCATCC +
Preference number: 4 (lower is better)
Translates to: HNSQTQTQVWLSPQPVLFILPGS*SQKEAS
Trigger: GGATGCTTCCTTCTGGCTCCAGGAGCCCGGGAGAAT...GAAGAGCACAGGCTGTGGGGACAACCAGACCTGTGTCTGCGTTTGGCTGTTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332468.5
ENST00000619645.1
CDS-3UTR CCA 90 bp AGTCACAACAGCCAAACGCAGACACAGGTCTGGTTGTCCCCACAGCCTGTGCTCGGATATCAGGTGACCTaGGTTCTCCCAGCCCCTCCA +
Preference number: 4 (lower is better)
Translates to: SHNSQTQTQVWLSPQPVLGYQVT*VLPAPP
Trigger: TGGAGGGGCTGGGAGAACCCAGGTCACCTGATATCC...GAGCACAGGCTGTGGGGACAACCAGACCTGTGTCTGCGTTTGGCTGTTGTGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332468.5
ENST00000619645.1
CDS-3UTR CCA 90 bp AGGACTCAGGATACAACTGAGGCAAGGCCAGGCCTGGCTTCACAGAGCTCCCTGTCCCATGTCTTTTCTTaGGTAGGGACGGTGCCCCAG +
Preference number: 4 (lower is better)
Translates to: RTQDTTEARPGLASQSSLSHVFS*VGTVPQ
Trigger: CTGGGGCACCGTCCCTACCCAAGAAAAGACATGGGA...CAGGGAGCTCTGTGAAGCCAGGCCTGGCCTTGCCTCAGTTGTATCCTGAGTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR CCA 90 bp CCTCCCTGCAGTTCCCAGCCACGACCTTCAAGAACACCAGGAGTGTCCACTCCCGGGTCTGTGTATGACTaGAAGGAAGTGGGGGTGAGA +
Preference number: 4 (lower is better)
Translates to: PPCSSQPRPSRTPGVSTPGSVYD*KEVGVR
Trigger: TCTCACCCCCACTTCCTTCCAGTCATACACAGACCC...GGGAGTGGACACTCCTGGTGTTCTTGAAGGTCGTGGCTGGGAACTGCAGGGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR CCA 90 bp ACAAAGTTCCTGGCACCAGAAGATGGCCAGTGCCCACTGATGGGAGGCCTGAGGGTCTGGGGGCTGTCTTaGCTGGGTCTAACCCTCAAA +
Preference number: 4 (lower is better)
Translates to: TKFLAPEDGQCPLMGGLRVWGLS*LGLTLK
Trigger: TTTGAGGGTTAGACCCAGCCAAGACAGCCCCCAGAC...CCTCAGGCCTCCCATCAGTGGGCACTGGCCATCTTCTGGTGCCAGGAACTTTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR CCA 90 bp GCTCTCTCAGGCGCCCACCAACTCCGTGCCATGTATTCATTAGCTCCCAGTTCTAGTGAGGCCTCACTCTaGAAGAGCGCCCCACAGGCA +
Preference number: 4 (lower is better)
Translates to: ALSGAHQLRAMYSLAPSSSEASL*KSAPQA
Trigger: TGCCTGTGGGGCGCTCTTCCAGAGTGAGGCCTCACT...AGAACTGGGAGCTAATGAATACATGGCACGGAGTTGGTGGGCGCCTGAGAGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR CCA 90 bp CAAGGCCAGGCCTGGCTTCACAGAGCTCCCTGGTCCAGTGGAGAAGAGCCAGGCTCCACTGTCAGGGAATaGGGGATCATCTATATTGGG +
Preference number: 4 (lower is better)
Translates to: QGQAWLHRAPWSSGEEPGSTVRE*GIIYIG
Trigger: CCCAATATAGATGATCCCCCATTCCCTGACAGTGGA...GCCTGGCTCTTCTCCACTGGACCAGGGAGCTCTGTGAAGCCAGGCCTGGCCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR CCA 90 bp CCTCCCTGCAGTTCCCAGCCACGACCTTCAAGAACACCAGGAGTGTCCACTCCCGGCTTCCAGGGCAAGTaGTTTGTGTGGAAGAACCCA +
Preference number: 4 (lower is better)
Translates to: PPCSSQPRPSRTPGVSTPGFQGK*FVWKNP
Trigger: TGGGTTCTTCCACACAAACCACTTGCCCTGGAAGCC...GGGAGTGGACACTCCTGGTGTTCTTGAAGGTCGTGGCTGGGAACTGCAGGGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR CCA 90 bp CTAGAGGCCGTCCACCTTCCTTGCCATGGGGCTCCCTCCATTGGGCTTGCTGTCCTACTTGGAGAACCTTaGCTCAGAGCAGATGATGCC +
Preference number: 4 (lower is better)
Translates to: LEAVHLPCHGAPSIGLAVLLGEP*LRADDA
Trigger: GGCATCATCTGCTCTGAGCCAAGGTTCTCCAAGTAG...GACAGCAAGCCCAATGGAGGGAGCCCCATGGCAAGGAAGGTGGACGGCCTCTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR CCA 90 bp GAAGCCCCTATCCAGCAGCAGGTCTTCAGACTCTGCCCCGGGAACTTGTGGAGACTTCACAGAGCTCCCTaGTCCAGTGGAGAAGAGCCA +
Preference number: 4 (lower is better)
Translates to: EAPIQQQVFRLCPGNLWRLHRAP*SSGEEP
Trigger: TGGCTCTTCTCCACTGGACCAGGGAGCTCTGTGAAG...TCTCCACAAGTTCCCGGGGCAGAGTCTGAAGACCTGCTGCTGGATAGGGGCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332468.5
3UTR CAA 72 bp ACCAAGTTAATCAAGCCCTCCTCCCCAGTGCTAGGCTaGCCCCAGACCTGCCAAGAGCCAGAGAGCATCCCT +
Preference number: 4 (lower is better)
Translates to: TKLIKPSSPVLG*PQTCQEPESIP
Trigger: AGGGATGCTCTCTGGCTCTTGGCAGGTCTGGGGCAAGCCTAGCACTGGGGAGGAGGGCTTGATTAACTTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR TCA 90 bp GATTCCAGAACAGGACGGTTTCTAAGACCTCTGGTCCTAGCCAGGCCCAGGAAGCCTAGATCCTCAGTCTaGAGCTGTGGGGCCCTCCTT +
Preference number: 4 (lower is better)
Translates to: DSRTGRFLRPLVLARPRKPRSSV*SCGALL
Trigger: AAGGAGGGCCCCACAGCTTCAGACTGAGGATCTAGG...CTTCCTGGGCCTGGCTAGGACCAGAGGTCTTAGAAACCGTCCTGTTCTGGAATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382363.8
CDS-3UTR TCA 90 bp AATCAAGCCCCACACAGTGTGGCGGTTAAGAACGCAGGCCTTGGGGATCATGCCGACTTAATGATCCCCTaGCCTGGGCCTCCCAAAGTG +
Preference number: 4 (lower is better)
Translates to: NQAPHSVAVKNAGLGDHADLMIP*PGPPKV
Trigger: CACTTTGGGAGGCCCAGGTCAGGGGATCATTAAGTC...GGCATGATCCCCAAGGCCTGCGTTCTTAACCGCCACACTGTGTGGGGCTTGATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR TCA 90 bp AGTCACAACAGCCAAACGCAGACACAGGTCTGGTTGTCCCCACAGCCTGTGCTCGCAGTTAGCTGCTCGTaGGACATCATCCAGGCCCTT +
Preference number: 4 (lower is better)
Translates to: SHNSQTQTQVWLSPQPVLAVSCS*DIIQAL
Trigger: AAGGGCCTGGATGATGTCTCACGAGCAGCTAACTGC...GAGCACAGGCTGTGGGGACAACCAGACCTGTGTCTGCGTTTGGCTGTTGTGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332468.5
ENST00000619645.1
CDS-3UTR TCA 90 bp CCTCTCACGGCTCCTAGAGGCCGTCCACCTTCCTTGCCATGGGGCTCCCTCCATCCCCCATTTTACGAATaGGGAAACAGCCTTATTGAG +
Preference number: 4 (lower is better)
Translates to: PLTAPRGRPPSLPWGSLHPPFYE*GNSLIE
Trigger: CTCAATAAGGCTGTTTCCTCATTCGTAAAATGGGGG...ATGGAGGGAGCCCCATGGCAAGGAAGGTGGACGGCCTCTAGGAGCCGTGAGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR TCA 90 bp CATGTATTCATTAGCTCCCAGTTCTGGCAGTCAGAAGTCCAGGTTCTGTGTGGCCCACTCCCAGACCATTaGGACGGCCCTGGTGCCCTG +
Preference number: 4 (lower is better)
Translates to: HVFISSQFWQSEVQVLCGPLPDH*DGPGAL
Trigger: CAGGGCACCAGGGCCGTCTCAATGGTCTGGGAGTGG...GCCACACAGAACCTGGACTTCTGACTGCCAGAACTGGGAGCTAATGAATACATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR TCA 90 bp GGGGTGCAGGCAGGAAGGGTCCATCCCCATGTGCAGAGTCCAGCTGGGCAGCTATGCTTCAAAGCTGTATaGGCTACTTGGAGAACCTTG +
Preference number: 4 (lower is better)
Translates to: GVQAGRVHPHVQSPAGQLCFKAV*ATWRTL
Trigger: CAAGGTTCTCCAAGTAGCTCATACAGCTTTGAAGCA...TAGCTGCCCAGCTGGACTCTGCACATGGGGATGGACCCTTCCTGCCTGCACCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR GCA 90 bp TCCCAGAACCCTGGCGACAGCTACACTGGCCCCATATTCTCTTTCCTTATTGACTGGAACTGGGCCGCCTaGTCCTTGCCCACGTATGCC +
Preference number: 4 (lower is better)
Translates to: SQNPGDSYTGPIFSFLIDWNWAA*SLPTYA
Trigger: GGCATACGTGGGCAAGGAGCAGGCGGCCCAGTTCCA...GTCAATAAGGAAAGAGAATATGGGGCCAGTGTAGCTGTCGCCAGGGTTCTGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215798.10
ENST00000382363.8
CDS-3UTR GCA 90 bp GAGCTCCCAGAACCCTGGCGACAGCTACACTGGCCCCATATTCTCTTTCCTTATGCGTTCCACAGCTGCTaGAGGGGTTTCTGCTCCTGG +
Preference number: 4 (lower is better)
Translates to: ELPEPWRQLHWPHILFPYAFHSC*RGFCSW
Trigger: CCAGGAGCAGAAACCCCTGCAGCAGCTGTGGAACGC...ATAAGGAAAGAGAATATGGGGCCAGTGTAGCTGTCGCCAGGGTTCTGGGAGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000215798.10
ENST00000382363.8
CDS-3UTR GCA 90 bp GTCACAGGATTGCAGAGAAGGTCCCAAAGTGACCTCTCTTCCTTGACTGACAGGCACAGTGGGCAGGTCTaGTGGAGCATCAGCCAGGGG +
Preference number: 4 (lower is better)
Translates to: VTGLQRRSQSDLSSLTDRHSGQV*WSISQG
Trigger: CCCCTGGCTGATGCTCCAGCAGACCTGCCCACTGTG...CCTGTCAGTCAAGGAAGAGAGGTCACTTTGGGACCTTCTCTGCAATCCTGTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000215798.10
ENST00000382363.8
CDS-3UTR GCA 90 bp GTATTCATTAGCTCCCAGTTCTGGCAGTCAGAAGTCCAGGTTCTGTGTGGCTGGCACAGTGGGCAGGTCTaGTGGAGCATCAGCCAGGGG +
Preference number: 4 (lower is better)
Translates to: VFISSQFWQSEVQVLCGWHSGQV*WSISQG
Trigger: CCCCTGGCTGATGCTCCAGCAGACCTGCCCACTGTG...CCAGCCACACAGAACCTGGACTTCTGACTGCCAGAACTGGGAGCTAATGAATAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332468.5
ENST00000421022.1
ENST00000630264.1
ENST00000631046.2
CDS-3UTR GCA 90 bp GAGCTCCCAGAACCCTGGCGACAGCTACACTGGCCCCATATTCTCTTTCCTTATGGACCCCACCCCTGGTaGTCACCCAGGACGTTGAAT +
Preference number: 4 (lower is better)
Translates to: ELPEPWRQLHWPHILFPYGPHPW*SPRTLN
Trigger: ATTCAACGTCCTGGGTGAGCACCAGGGGTGGGGTCC...ATAAGGAAAGAGAATATGGGGCCAGTGTAGCTGTCGCCAGGGTTCTGGGAGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000215798.10
CDS-3UTR GCA 90 bp CAGACTCACGTCACAGGATTGCAGAGAAGGTCCCAAAGTGACCTCTCTTCCTTGGGGTCCATCCCCATGTaGAGAGTCCAGCTGGGCAGC +
Preference number: 4 (lower is better)
Translates to: QTHVTGLQRRSQSDLSSLGSIPM*RVQLGS
Trigger: GCTGCCCAGCTGGACTCTGCACATGGGGATGGACCC...CAAGGAAGAGAGGTCACTTTGGGACCTTCTCTGCAATCCTGTGACGTGAGTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000215798.10
ENST00000382363.8
CDS-3UTR GCA 90 bp TTCATTAGCTCCCAGTTCTGGCAGTCAGAAGTCCAGGTTCTGTGTGGCTGGGTTGGGTCCATCCCCATGTaGAGAGTCCAGCTGGGCAGC +
Preference number: 4 (lower is better)
Translates to: FISSQFWQSEVQVLCGWVGSIPM*RVQLGS
Trigger: GCTGCCCAGCTGGACTCTGCACATGGGGATGGACCC...AACCCAGCCACACAGAACCTGGACTTCTGACTGCCAGAACTGGGAGCTAATGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332468.5
ENST00000630264.1
ENST00000631046.2
CDS-3UTR GCA 90 bp TGGCAGAATTCCGATCCTTGCGGCTGTGGGACTGAGGTCCCCATGTCCTCGCTGGGTTGCGTTCCTTTCTaGCGGTTCTGGGGAAGAATT +
Preference number: 4 (lower is better)
Translates to: WQNSDPCGCGTEVPMSSLGCVPF*RFWGRI
Trigger: AATTCTTCCCCAGAACCGGCAGAAAGGAACGCAACC...CAGCGAGGACATGGGGACCTCAGTCCCACAGCCGCAAGGATCGGAATTCTGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332468.5
ENST00000421022.1
ENST00000630264.1
ENST00000631046.2
CDS-3UTR GCA 90 bp AAGTTCCTGGCACCAGAAGATGGCCAGTGCCCACTGATGGGAGGCCTGAGGGATCGCCCACCAACTCCGTaGCATGTATTCATTAGCTCC +
Preference number: 4 (lower is better)
Translates to: KFLAPEDGQCPLMGGLRDRPPTP*HVFISS
Trigger: GGAGCTAATGAATACATGGCACGGAGTTGGTGGGCG...ATCCCTCAGGCCTCCCATCAGTGGGCACTGGCCATCTTCTGGTGCCAGGAACTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR GCA 90 bp GGGGTGCAGGCAGGAAGGGTCCATCCCCATGTGCAGAGTCCAGCTGGGCAGCTATGTCATTCCTTTAAGTaGAGCAAGAAGCCTCGTCAG +
Preference number: 4 (lower is better)
Translates to: GVQAGRVHPHVQSPAGQLCHSFK*SKKPRQ
Trigger: CTGACGAGGCTTCTTGCTGCACTTAAAGGAATGACA...TAGCTGCCCAGCTGGACTCTGCACATGGGGATGGACCCTTCCTGCCTGCACCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR GCA 90 bp GTCCCCATGTCCTCGCTGGCTGGCTGTAAGCCAGGTCCTCTCACGGCTCCTAGAATGTTATGGATCCGATaGCTTCCAGTCCCATATGCC +
Preference number: 4 (lower is better)
Translates to: VPMSSLAGCKPGPLTAPRMLWIR*LPVPYA
Trigger: GGCATATGGGACTGGAAGGCATCGGATCCATAACAT...TCTAGGAGCCGTGAGAGGACCTGGCTTACAGCCAGCCAGCGAGGACATGGGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR GCA 90 bp AGTCACAACAGCCAAACGCAGACACAGGTCTGGTTGTCCCCACAGCCTGTGCTCGGGGGTCTTCCTTTTTaGCAGAGAAGTCTCCGGCCA +
Preference number: 4 (lower is better)
Translates to: SHNSQTQTQVWLSPQPVLGGLPF*QRSLRP
Trigger: TGGCCGGAGACTTCTCTGGCAAAAAGGAAGACCCCC...GAGCACAGGCTGTGGGGACAACCAGACCTGTGTCTGCGTTTGGCTGTTGTGACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR GCA 90 bp CATGTATTCATTAGCTCCCAGTTCTGGCAGTCAGAAGTCCAGGTTCTGTGTGGCCGGTGTGCATCTGCCTaGTGCCAGCTTCCCCCGACC +
Preference number: 4 (lower is better)
Translates to: HVFISSQFWQSEVQVLCGRCASA*CQLPPT
Trigger: GGTCGGGGGAAGCTGGCAGCAGGCAGATGCACACCG...GCCACACAGAACCTGGACTTCTGACTGCCAGAACTGGGAGCTAATGAATACATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR GCA 90 bp ATCATCCAGGCCCTTCTGTCCCCTTCTCAACCACCTTGTGAGGCAGGTCATAGCTGTGCCACACTCTCCTaGCAGATGGCTAAGGGGTGC +
Preference number: 4 (lower is better)
Translates to: IIQALLSPSQPPCEAGHSCATLS*QMAKGC
Trigger: GCACCCCTTAGCCATCTGGCAGGAGAGTGTGGCACA...GCTATGACCTGCCTCACAAGGTGGTTGAGAAGGGGACAGAAGGGCCTGGATGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR GCA 90 bp GCTCTCTCAGGCGCCCACCAACTCCGTGCCATGTATTCATTAGCTCCCAGTTCTCATCATAGGCCCCCATaGCACATCTCAAGCCAGGGG +
Preference number: 4 (lower is better)
Translates to: ALSGAHQLRAMYSLAPSSHHRPP*HISSQG
Trigger: CCCCTGGCTTGAGATGTGGCATGGGGGCCTATGATG...AGAACTGGGAGCTAATGAATACATGGCACGGAGTTGGTGGGCGCCTGAGAGAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR GCA 90 bp CTAGAGGCCGTCCACCTTCCTTGCCATGGGGCTCCCTCCATTGGGCTTGCTGTCCTCTGCCACAGCCTTTaGATGGATGTTTGTGAGACA +
Preference number: 4 (lower is better)
Translates to: LEAVHLPCHGAPSIGLAVLCHSL*MDVCET
Trigger: TGTCTCACAAACATCCATGCAAAGGCTGTGGCAGAG...GACAGCAAGCCCAATGGAGGGAGCCCCATGGCAAGGAAGGTGGACGGCCTCTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR GCA 90 bp CTCCCTGCTCTGCCCTATCAATGTGTGTCTGTGGGCAAGCTCTTCCCCTCTCTGTTGGGGATCATGCCTTaGTCCCTGGCTCTGACATCC +
Preference number: 4 (lower is better)
Translates to: LPALPYQCVSVGKLFPSLLGIMP*SLALTS
Trigger: GGATGTCAGAGCCAGGGAGCAAGGCATGATCCCCAA...CAGAGAGGGGAAGAGCTTGCCCACAGACACACATTGATAGGGCAGAGCAGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR CCA 90 bp TCCCAGAACCCTGGCGACAGCTACACTGGCCCCATATTCTCTTTCCTTATTGACTTCTCCTGGTGGAACTaGGCCGCCTGCTCCTTGCCC +
Preference number: 4 (lower is better)
Translates to: SQNPGDSYTGPIFSFLIDFSWWN*AACSLP
Trigger: GGGCAAGGAGCAGGCGGCCCAGTTCCACCAGGAGAA...GTCAATAAGGAAAGAGAATATGGGGCCAGTGTAGCTGTCGCCAGGGTTCTGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215798.10
ENST00000382363.8
CDS-3UTR CCA 90 bp CAGACTCACGTCACAGGATTGCAGAGAAGGTCCCAAAGTGACCTCTCTTCCTTGCATCCTGTCCTGTCCTaGGAGCCCAGGCTGAGGACC +
Preference number: 4 (lower is better)
Translates to: QTHVTGLQRRSQSDLSSLHPVLS*EPRLRT
Trigger: GGTCCTCAGCCTGGGCTCCCAGGACAGGACAGGATG...CAAGGAAGAGAGGTCACTTTGGGACCTTCTCTGCAATCCTGTGACGTGAGTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000215798.10
ENST00000382363.8
CDS-3UTR CCA 90 bp GGCAGACTCACGTCACAGGATTGCAGAGAAGGTCCCAAAGTGACCTCTCTTCCTCCAGTGTGGACATGGTaGGGCCCTCATCCTTCCTCC +
Preference number: 4 (lower is better)
Translates to: GRLTSQDCREGPKVTSLPPVWTW*GPHPSS
Trigger: GGAGGAAGGATGAGGGCCCCACCATGTCCACACTGG...AGGAAGAGAGGTCACTTTGGGACCTTCTCTGCAATCCTGTGACGTGAGTCTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000215798.10
ENST00000382363.8
CDS-3UTR CCA 90 bp AGTATCCCGGTCAGCAACACAAAGCCGCAGCCAAGGATTCCAGAACAGGACGGTTTCCCAGTGTGGACATaGTGGGGCCCTCATCCTTCC +
Preference number: 4 (lower is better)
Translates to: SIPVSNTKPQPRIPEQDGFPVWT*WGPHPS
Trigger: GGAAGGATGAGGGCCCCACCATGTCCACACTGGGAA...ACCGTCCTGTTCTGGAATCCTTGGCTGCGGCTTTGTGTTGCTGACCGGGATACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382363.8
CDS-3UTR CCA 90 bp AGTCACAACAGCCAAACGCAGACACAGGTCTGGTTGTCCCCACAGCCTGTGCTCTGGGGCTCCCTCCATTaGGCTTGCTGTCCTGTCTAT +
Preference number: 4 (lower is better)
Translates to: SHNSQTQTQVWLSPQPVLWGSLH*ACCPVY
Trigger: ATAGACAGGACAGCAAGCCCAATGGAGGGAGCCCCA...GAGCACAGGCTGTGGGGACAACCAGACCTGTGTCTGCGTTTGGCTGTTGTGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR CCA 90 bp CAGAATTCCGATCCTTGCGGCTGTGGGACTGAGGTCCCCATGTCCTCGCTGGCTCCAAGCTCCACTTGTTaGCAGAATTCCGATCCTTGC +
Preference number: 4 (lower is better)
Translates to: QNSDPCGCGTEVPMSSLAPSSTC*QNSDPC
Trigger: GCAAGGATCGGAATTCTGCCAACAAGTGGAGCTTGG...AGCCAGCGAGGACATGGGGACCTCAGTCCCACAGCCGCAAGGATCGGAATTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332468.5
ENST00000421022.1
ENST00000630264.1
ENST00000631046.2
CDS-3UTR CCA 90 bp TCCCCATGTCCTCGCTGGCTGGCTGTAAGCCAGGTCCTCTCACGGCTCCTAGAGATGTCCCACAGACTCTaGCAACGTCACAGATCACAT +
Preference number: 4 (lower is better)
Translates to: SPCPRWLAVSQVLSRLLEMSHRL*QRHRSH
Trigger: ATGTGATCTGTGACGTTGCCAGAGTCTGTGGGACAT...CTCTAGGAGCCGTGAGAGGACCTGGCTTACAGCCAGCCAGCGAGGACATGGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR CCA 90 bp AGTCACAACAGCCAAACGCAGACACAGGTCTGGTTGTCCCCACAGCCTGTGCTCTTCCCAAGCTTGAGCTaGCCGTGTGACCTTGGACAG +
Preference number: 4 (lower is better)
Translates to: SHNSQTQTQVWLSPQPVLFPSLS*PCDLGQ
Trigger: CTGTCCAAGGTCACACGGCCAGCTCAAGCTTGGGAA...GAGCACAGGCTGTGGGGACAACCAGACCTGTGTCTGCGTTTGGCTGTTGTGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332468.5
ENST00000619645.1
CDS-3UTR CCA 90 bp GTCACAACAGCCAAACGCAGACACAGGTCTGGTTGTCCCCACAGCCTGTGCTCTCTGTCCTGGACCCCATaGCATAGGAGTGCTAGGTAC +
Preference number: 4 (lower is better)
Translates to: VTTAKRRHRSGCPHSLCSLSWTP*HRSARY
Trigger: GTACCTAGCACTCCTATGCCATGGGGTCCAGGACAG...AGAGCACAGGCTGTGGGGACAACCAGACCTGTGTCTGCGTTTGGCTGTTGTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332468.5
ENST00000619645.1
CDS-3UTR CCA 90 bp AGTCACAACAGCCAAACGCAGACACAGGTCTGGTTGTCCCCACAGCCTGTGCTCGTGTGTCCCCCTTCTTaGTTCTTGGAATGGGTCCCC +
Preference number: 4 (lower is better)
Translates to: SHNSQTQTQVWLSPQPVLVCPPS*FLEWVP
Trigger: GGGGACCCATTCCAAGAACCAAGAAGGGGGACACAC...GAGCACAGGCTGTGGGGACAACCAGACCTGTGTCTGCGTTTGGCTGTTGTGACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000332468.5
ENST00000619645.1
CDS-3UTR CCA 90 bp GATGACCAAACTGGGTTGCCACCTCCTACCGAGAAAGCGCCTTCTATTTTCCAAGCAGCGCAGCCCCTGTaGACCCACCACAGCACGCAA +
Preference number: 4 (lower is better)
Translates to: DDQTGLPPPTEKAPSIFQAAQPL*THHSTQ
Trigger: TTGCGTGCTGTGGTGGGTCCACAGGGGCTGCGCTGC...TTGGAAAATAGAAGGCGCTTTCTCGGTAGGAGGTGGCAACCCAGTTTGGTCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR CCA 90 bp TGTGGAGAGCCCACCTCATCACATGAGGCCTTAGGCTGTGCTTTTGTGAAACATGGGAGCGGCTGCTGGTaGCCTTCCCAGACCTGCACA +
Preference number: 4 (lower is better)
Translates to: CGEPTSSHEALGCAFVKHGSGCW*PSQTCT
Trigger: TGTGCAGGTCTGGGAAGGCCACCAGCAGCCGCTCCC...ATGTTTCACAAAAGCACAGCCTAAGGCCTCATGTGATGAGGTGGGCTCTCCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR CCA 90 bp TGTTGGCAGAATTCCGATCCTTGCGGCTGTGGGACTGAGGTCCCCATGTCCTCGAGATGCCTCCAGGTGTaGGGGTTGACTCACCTTTAC +
Preference number: 4 (lower is better)
Translates to: CWQNSDPCGCGTEVPMSSRCLQV*GLTHLY
Trigger: GTAAAGGTGAGTCAACCCCCACACCTGGAGGCATCT...CGAGGACATGGGGACCTCAGTCCCACAGCCGCAAGGATCGGAATTCTGCCAACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR CCA 90 bp GTCACAACAGCCAAACGCAGACACAGGTCTGGTTGTCCCCACAGCCTGTGCTCTTCACAGTTGCCTCCATaGACGACACCAAGGCCCAGA +
Preference number: 4 (lower is better)
Translates to: VTTAKRRHRSGCPHSLCSSQLPP*TTPRPR
Trigger: TCTGGGCCTTGGTGTCGTCCATGGAGGCAACTGTGA...AGAGCACAGGCTGTGGGGACAACCAGACCTGTGTCTGCGTTTGGCTGTTGTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR CCA 90 bp AAGTTCCTGGCACCAGAAGATGGCCAGTGCCCACTGATGGGAGGCCTGAGGGATGCCACAGCCTTTGCATaGATGTTTGTGAGACAGGGC +
Preference number: 4 (lower is better)
Translates to: KFLAPEDGQCPLMGGLRDATAFA*MFVRQG
Trigger: GCCCTGTCTCACAAACATCCATGCAAAGGCTGTGGC...ATCCCTCAGGCCTCCCATCAGTGGGCACTGGCCATCTTCTGGTGCCAGGAACTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332468.5
3UTR CAA 72 bp AGGGCGCACGCTCCCAAATGCCTGAAGCATTTTCCCTaGGTGAAGAGGCCGTCAGGTAGAGCACCTCAGTTC +
Preference number: 4 (lower is better)
Translates to: RAHAPKCLKHFP*VKRPSGRAPQF
Trigger: GAACTGAGGTGCTCTACCTGACGGCCTCTTCACCAAGGGAAAATGCTTCAGGCATTTGGGAGCGTGCGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR TCA 90 bp GATTCCAGAACAGGACGGTTTCTAAGACCTCTGGTCCTAGCCAGGCCCAGGAAGCGTTGTGGTTCAGGATaGGAAGAAGCAGGGCAGAGG +
Preference number: 4 (lower is better)
Translates to: DSRTGRFLRPLVLARPRKRCGSG*EEAGQR
Trigger: CCTCTGCCCTGCTTCTTCTCATCCTGAACCACAACG...CTTCCTGGGCCTGGCTAGGACCAGAGGTCTTAGAAACCGTCCTGTTCTGGAATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382363.8
CDS-3UTR TCA 90 bp GACAGGCCACAGGGAGCTCCCAGAACCCTGGCGACAGCTACACTGGCCCCATATCATCCAACAGCTTGGTaGCATTGGAGGAATAATGGA +
Preference number: 4 (lower is better)
Translates to: DRPQGAPRTLATATLAPYHPTAW*HWRNNG
Trigger: TCCATTATTCCTCCAATGTCACCAAGCTGTTGGATG...ATATGGGGCCAGTGTAGCTGTCGCCAGGGTTCTGGGAGCTCCCTGTGGCCTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215798.10
ENST00000382363.8
CDS-3UTR TCA 90 bp GGCCACAGGGAGCTCCCAGAACCCTGGCGACAGCTACACTGGCCCCATATTCTCCATCCAACAGCTTGGTaGCATTGGAGGAATAATGGA +
Preference number: 4 (lower is better)
Translates to: GHRELPEPWRQLHWPHILHPTAW*HWRNNG
Trigger: TCCATTATTCCTCCAATGTCACCAAGCTGTTGGATG...GAGAATATGGGGCCAGTGTAGCTGTCGCCAGGGTTCTGGGAGCTCCCTGTGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215798.10
ENST00000382363.8
CDS-3UTR TCA 90 bp AGTATCCCGGTCAGCAACACAAAGCCGCAGCCAAGGATTCCAGAACAGGACGGTTCCACACAGTCTCGGTaGAACTCGTGCTTACAGGGC +
Preference number: 4 (lower is better)
Translates to: SIPVSNTKPQPRIPEQDGSTQSR*NSCLQG
Trigger: GCCCTGTAAGCACGAGTTTCACCGAGACTGTGTGGA...ACCGTCCTGTTCTGGAATCCTTGGCTGCGGCTTTGTGTTGCTGACCGGGATACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382363.8
CDS-3UTR TCA 90 bp ATCCTGTGGCTTCGAGTATCCCGGTCAGCAACACAAAGCCGCAGCCAAGGATTCCCTCTCTTCCTTGACTaGCAGGTCCCAGCCCTAGAT +
Preference number: 4 (lower is better)
Translates to: ILWLRVSRSATQSRSQGFPLFLD*QVPALD
Trigger: ATCTAGGGCTGGGACCTGTCAGTCAAGGAAGAGAGG...GAATCCTTGGCTGCGGCTTTGTGTTGCTGACCGGGATACTCGAAGCCACAGGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382363.8
CDS-3UTR TCA 90 bp ATCATCCAGGCCCTTCTGTCCCCTTCTCAACCACCTTGTGAGGCAGGTCATAGCTCTCCAAAAACTTGCTaGGGCCTTCTCAGGGCGCAC +
Preference number: 4 (lower is better)
Translates to: IIQALLSPSQPPCEAGHSSPKTC*GLLRAH
Trigger: GTGCGCCCTGAGAAGGCCTCAGCAAGTTTTTGGAGA...GCTATGACCTGCCTCACAAGGTGGTTGAGAAGGGGACAGAAGGGCCTGGATGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR TCA 90 bp GATGACCAAACTGGGTTGCCACCTCCTACCGAGAAAGCGCCTTCTATTTTCCAAAAGTCTCCGGCCAACTaGGTGCCTGCAGGCCTGTCC +
Preference number: 4 (lower is better)
Translates to: DDQTGLPPPTEKAPSIFQKSPAN*VPAGLS
Trigger: GGACAGGCCTGCAGGCACTCAGTTGGCCGGAGACTT...TTGGAAAATAGAAGGCGCTTTCTCGGTAGGAGGTGGCAACCCAGTTTGGTCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR TCA 90 bp TCACAACAGCCAAACGCAGACACAGGTCTGGTTGTCCCCACAGCCTGTGCTCTTCCACACTATTGGCGATaGCCAAACTGGGTTGCCACC +
Preference number: 4 (lower is better)
Translates to: SQQPNADTGLVVPTACALPHYWR*PNWVAT
Trigger: GGTGGCAACCCAGTTTGGTCATCGCCAATAGTGTGG...AAGAGCACAGGCTGTGGGGACAACCAGACCTGTGTCTGCGTTTGGCTGTTGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR TCA 90 bp GAGCCAGCCATCTGCGTTCCAAGGGCCGGGGTCTTCAAGCTGGGATCCTGGCCTTGCCATAGAAACAAGTaGCCTAAAGACAAAGATGGC +
Preference number: 4 (lower is better)
Translates to: EPAICVPRAGVFKLGSWPCHRNK*PKDKDG
Trigger: GCCATCTTTGTCTTTAGGTCACTTGTTTCTATGGCA...AGGCCAGGATCCCAGCTTGAAGACCCCGGCCCTTGGAACGCAGATGGCTGGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR TCA 90 bp CACAACAGCCAAACGCAGACACAGGTCTGGTTGTCCCCACAGCCTGTGCTCTTCTCGTCCATCGGTCAGTaGGGGAACCGAGGTATGTAT +
Preference number: 4 (lower is better)
Translates to: HNSQTQTQVWLSPQPVLFSSIGQ*GNRGMY
Trigger: ATACATACCTCGGTTCCCTCACTGACCGATGGACGA...GAAGAGCACAGGCTGTGGGGACAACCAGACCTGTGTCTGCGTTTGGCTGTTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR TCA 90 bp AAGATGGCCACCCTGGAGAGAGAACTGAAACAGCAGCGGGAGTCCACACAGGCTTTGCATGGATGTTTGTaGGACAGGGCTTCCAGGGCA +
Preference number: 4 (lower is better)
Translates to: KMATLERELKQQRESTQALHGCL*DRASRA
Trigger: TGCCCTGGAAGCCCTGTCTCACAAACATCCATGCAA...AGCCTGTGTGGACTCCCGCTGCTGTTTCAGTTCTCTCTCCAGGGTGGCCATCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR GCA 90 bp GATTCCAGAACAGGACGGTTTCTAAGACCTCTGGTCCTAGCCAGGCCCAGGAAGCTCCTTGCCCACGTATaGCACTGCAATCCAGCCTTC +
Preference number: 4 (lower is better)
Translates to: DSRTGRFLRPLVLARPRKLLAHV*HCNPAF
Trigger: GAAGGCTGGATTGCAGTGGCATACGTGGGCAAGGAG...CTTCCTGGGCCTGGCTAGGACCAGAGGTCTTAGAAACCGTCCTGTTCTGGAATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382363.8
CDS-3UTR GCA 90 bp GAGCTCCCAGAACCCTGGCGACAGCTACACTGGCCCCATATTCTCTTTCCTTATGTGGCCTGGGTCCTCTaGAGCAATGCATCCAACAGC +
Preference number: 4 (lower is better)
Translates to: ELPEPWRQLHWPHILFPYVAWVL*SNASNS
Trigger: GCTGTTGGATGCATTGCTGCAGAGGACCCAGGCCAC...ATAAGGAAAGAGAATATGGGGCCAGTGTAGCTGTCGCCAGGGTTCTGGGAGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215798.10
ENST00000382363.8
CDS-3UTR GCA 90 bp GTCACAGGATTGCAGAGAAGGTCCCAAAGTGACCTCTCTTCCTTGACTGACAGGTGCTGCAGGGGTTTCTaGTCCTGGGCACGACTGCCT +
Preference number: 4 (lower is better)
Translates to: VTGLQRRSQSDLSSLTDRCCRGF*SWARLP
Trigger: AGGCAGTCGTGCCCAGGAGCAGAAACCCCTGCAGCA...CCTGTCAGTCAAGGAAGAGAGGTCACTTTGGGACCTTCTCTGCAATCCTGTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215798.10
ENST00000382363.8
CDS-3UTR GCA 90 bp GGCAGACTCACGTCACAGGATTGCAGAGAAGGTCCCAAAGTGACCTCTCTTCCTATGGCGTTCCACAGCTaGTGCAGGGGTTTCTGCTCC +
Preference number: 4 (lower is better)
Translates to: GRLTSQDCREGPKVTSLPMAFHS*CRGFCS
Trigger: GGAGCAGAAACCCCTGCAGCAGCTGTGGAACGCCAT...AGGAAGAGAGGTCACTTTGGGACCTTCTCTGCAATCCTGTGACGTGAGTCTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215798.10
ENST00000382363.8
CDS-3UTR GCA 90 bp CTGGGAGCTGCCTGTAAGGAGGGCAGACTCACGTCACAGGATTGCAGAGAAGGTCTGTCCTGTCTATCCTaGTGTCCCATCCTGTCCTGT +
Preference number: 4 (lower is better)
Translates to: LGAACKEGRLTSQDCREGLSCLS*CPILSC
Trigger: ACAGGACAGGATGGGACAGCAGGATAGACAGGACAG...ACCTTCTCTGCAATCCTGTGACGTGAGTCTGCCCTCCTTACAGGCAGCTCCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000215798.10
ENST00000382363.8
CDS-3UTR GCA 90 bp AATCAAGCCCCACACAGTGTGGCGGTTAAGAACGCAGGCCTTGGGGATCATGCCCTGTCCTGTCTATCCTaGTGTCCCATCCTGTCCTGT +
Preference number: 4 (lower is better)
Translates to: NQAPHSVAVKNAGLGDHALSCLS*CPILSC
Trigger: ACAGGACAGGATGGGACAGCAGGATAGACAGGACAG...GGCATGATCCCCAAGGCCTGCGTTCTTAACCGCCACACTGTGTGGGGCTTGATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR GCA 90 bp CTCAGGCGCCCACCAACTCCGTGCCATGTATTCATTAGCTCCCAGTTCTGGCAGCTGTCCTGTCTATCCTaGTGTCCCATCCTGTCCTGT +
Preference number: 4 (lower is better)
Translates to: LRRPPTPCHVFISSQFWQLSCLS*CPILSC
Trigger: ACAGGACAGGATGGGACAGCAGGATAGACAGGACAG...CTGCCAGAACTGGGAGCTAATGAATACATGGCACGGAGTTGGTGGGCGCCTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332468.5
ENST00000630264.1
CDS-3UTR GCA 90 bp AAGTTCCTGGCACCAGAAGATGGCCAGTGCCCACTGATGGGAGGCCTGAGGGATGGTTGCGTTCCTTTCTaGCGGTTCTGGGGAAGAATT +
Preference number: 4 (lower is better)
Translates to: KFLAPEDGQCPLMGGLRDGCVPF*RFWGRI
Trigger: AATTCTTCCCCAGAACCGGCAGAAAGGAACGCAACC...ATCCCTCAGGCCTCCCATCAGTGGGCACTGGCCATCTTCTGGTGCCAGGAACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR GCA 90 bp AGTCACAACAGCCAAACGCAGACACAGGTCTGGTTGTCCCCACAGCCTGTGCTCACATGGAGAGGCAAGTaGAGTCCAACGACATCCGCA +
Preference number: 4 (lower is better)
Translates to: SHNSQTQTQVWLSPQPVLTWRGK*SPTTSA
Trigger: TGCGGATGTCGTTGGACTGCACTTGCCTCTCCATGT...GAGCACAGGCTGTGGGGACAACCAGACCTGTGTCTGCGTTTGGCTGTTGTGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR GCA 90 bp CACAACAGCCAAACGCAGACACAGGTCTGGTTGTCCCCACAGCCTGTGCTCTTCTGTCCCCACAGCCTGTaGTCTTCACTACGTCACATG +
Preference number: 4 (lower is better)
Translates to: HNSQTQTQVWLSPQPVLFCPHSL*SSLRHM
Trigger: CATGTGACGTAGTGAAGAGCACAGGCTGTGGGGACA...GAAGAGCACAGGCTGTGGGGACAACCAGACCTGTGTCTGCGTTTGGCTGTTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332468.5
ENST00000619645.1
CDS-3UTR GCA 90 bp TGTTGGCAGAATTCCGATCCTTGCGGCTGTGGGACTGAGGTCCCCATGTCCTCGAAAGATGAGCAGGTGTaGCACACTCTCCTGCCAGAT +
Preference number: 4 (lower is better)
Translates to: CWQNSDPCGCGTEVPMSSKDEQV*HTLLPD
Trigger: ATCTGGCAGGAGAGTGTGGCACACCTGCTCATCTTT...CGAGGACATGGGGACCTCAGTCCCACAGCCGCAAGGATCGGAATTCTGCCAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR CCA 90 bp GAGCTCCCAGAACCCTGGCGACAGCTACACTGGCCCCATATTCTCTTTCCTTATGGCCTGAGCAGAAGCTaGGATATGTCCAGCTCTCGG +
Preference number: 4 (lower is better)
Translates to: ELPEPWRQLHWPHILFPYGLSRS*DMSSSR
Trigger: CCGAGAGCTGGACATATCCCAGCTTCTGCTCAGGCC...ATAAGGAAAGAGAATATGGGGCCAGTGTAGCTGTCGCCAGGGTTCTGGGAGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215798.10
ENST00000382363.8
CDS-3UTR CCA 90 bp GTCACAGGATTGCAGAGAAGGTCCCAAAGTGACCTCTCTTCCTTGACTGACAGGTGGCCACCAGCAGGATaGCGTTCCACAGCTGCTGCA +
Preference number: 4 (lower is better)
Translates to: VTGLQRRSQSDLSSLTDRWPPAG*RSTAAA
Trigger: TGCAGCAGCTGTGGAACGCCATCCTGCTGGTGGCCA...CCTGTCAGTCAAGGAAGAGAGGTCACTTTGGGACCTTCTCTGCAATCCTGTGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000215798.10
ENST00000382363.8
CDS-3UTR CCA 90 bp CAGACTCACGTCACAGGATTGCAGAGAAGGTCCCAAAGTGACCTCTCTTCCTTGCTGTGCACAGGAGCATaGCCACCAGCAGGATGGCGT +
Preference number: 4 (lower is better)
Translates to: QTHVTGLQRRSQSDLSSLLCTGA*PPAGWR
Trigger: ACGCCATCCTGCTGGTGGCCATGCTCCTGTGCACAG...CAAGGAAGAGAGGTCACTTTGGGACCTTCTCTGCAATCCTGTGACGTGAGTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000215798.10
ENST00000382363.8
CDS-3UTR CCA 90 bp CATGTATTCATTAGCTCCCAGTTCTGGCAGTCAGAAGTCCAGGTTCTGTGTGGCAGTGGGCAGGTCTGCTaGAGCATCAGCCAGGGGTCC +
Preference number: 4 (lower is better)
Translates to: HVFISSQFWQSEVQVLCGSGQVC*SISQGS
Trigger: GGACCCCTGGCTGATGCTCCAGCAGACCTGCCCACT...GCCACACAGAACCTGGACTTCTGACTGCCAGAACTGGGAGCTAATGAATACATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332468.5
ENST00000421022.1
ENST00000630264.1
ENST00000631046.2
CDS-3UTR CCA 90 bp ACTTGTTGGCAGAATTCCGATCCTTGCGGCTGTGGGACTGAGGTCCCCATGTCCTGTGCAGAGTCCAGCTaGGCAGCTAATCATCGGAGT +
Preference number: 4 (lower is better)
Translates to: TCWQNSDPCGCGTEVPMSCAESS*AANHRS
Trigger: ACTCCGATGATTAGCTGCCCAGCTGGACTCTGCACA...GGACATGGGGACCTCAGTCCCACAGCCGCAAGGATCGGAATTCTGCCAACAAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332468.5
ENST00000630264.1
ENST00000631046.2
CDS-3UTR CCA 90 bp GATTCCAGAACAGGACGGTTTCTAAGACCTCTGGTCCTAGCCAGGCCCAGGAAGCTTCCTCCCACCCACTaGGCTTGCTGTCCTGTCTAT +
Preference number: 4 (lower is better)
Translates to: DSRTGRFLRPLVLARPRKLPPTH*ACCPVY
Trigger: ATAGACAGGACAGCAAGCCCAGTGGGTGGGAGGAAG...CTTCCTGGGCCTGGCTAGGACCAGAGGTCTTAGAAACCGTCCTGTTCTGGAATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382363.8
CDS-3UTR CCA 90 bp TTCATTAGCTCCCAGTTCTGGCAGTCAGAAGTCCAGGTTCTGTGTGGCTGGGTTCCACCTTCCTTGCCATaGGGCTCCCTCCATTGGGCT +
Preference number: 4 (lower is better)
Translates to: FISSQFWQSEVQVLCGWVPPSLP*GSLHWA
Trigger: AGCCCAATGGAGGGAGCCCCATGGCAAGGAAGGTGG...AACCCAGCCACACAGAACCTGGACTTCTGACTGCCAGAACTGGGAGCTAATGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332468.5
ENST00000630264.1
CDS-3UTR CCA 90 bp TGGCAGAATTCCGATCCTTGCGGCTGTGGGACTGAGGTCCCCATGTCCTCGCTGGTTCTGGGGAAGAATTaGCTTCCAAGCTCCACTTGT +
Preference number: 4 (lower is better)
Translates to: WQNSDPCGCGTEVPMSSLVLGKN*LPSSTC
Trigger: ACAAGTGGAGCTTGGAAGCCAATTCTTCCCCAGAAC...CAGCGAGGACATGGGGACCTCAGTCCCACAGCCGCAAGGATCGGAATTCTGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332468.5
ENST00000421022.1
ENST00000630264.1
ENST00000631046.2
CDS-3UTR CCA 90 bp GCTGCAGAGCGAGCGGGAGCAGGGGCAATGCCAGCTCAGGGCCCAGCAGGTGAGGATTTTATAATACTATaGTCATCTTCCCTGCAGGTT +
Preference number: 4 (lower is better)
Translates to: AAERAGAGAMPAQGPAGEDFIIL*SSSLQV
Trigger: AACCTGCAGGGAAGATGACCATAGTATTATAAAATC...CTCACCTGCTGGGCCCTGAGCTGGCATTGCCCCTGCTCCCGCTCGCTCTGCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR CCA 90 bp CCTCCCTGCAGTTCCCAGCCACGACCTTCAAGAACACCAGGAGTGTCCACTCCCGCTAGGTACCCATCTTaGCACAGGATTGGATATCAG +
Preference number: 4 (lower is better)
Translates to: PPCSSQPRPSRTPGVSTPARYPS*HRIGYQ
Trigger: CTGATATCCAATCCTGTGCCAAGATGGGTACCTAGC...GGGAGTGGACACTCCTGGTGTTCTTGAAGGTCGTGGCTGGGAACTGCAGGGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR CCA 90 bp CACAACAGCCAAACGCAGACACAGGTCTGGTTGTCCCCACAGCCTGTGCTCTTCCCCCTTCTTGGTTCTTaGAATGGGTCCCCAAACCAC +
Preference number: 4 (lower is better)
Translates to: HNSQTQTQVWLSPQPVLFPLLGS*NGSPNH
Trigger: GTGGTTTGGGGACCCATTCCAAGAACCAAGAAGGGG...GAAGAGCACAGGCTGTGGGGACAACCAGACCTGTGTCTGCGTTTGGCTGTTGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000332468.5
ENST00000619645.1
CDS-3UTR CCA 90 bp ATCATCCAGGCCCTTCTGTCCCCTTCTCAACCACCTTGTGAGGCAGGTCATAGCGTGTGTCCCCCTTCTTaGTTCTTGGAATGGGTCCCC +
Preference number: 4 (lower is better)
Translates to: IIQALLSPSQPPCEAGHSVCPPS*FLEWVP
Trigger: GGGGACCCATTCCAAGAACCAAGAAGGGGGACACAC...GCTATGACCTGCCTCACAAGGTGGTTGAGAAGGGGACAGAAGGGCCTGGATGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR CCA 90 bp TTCATTAGCTCCCAGTTCTGGCAGTCAGAAGTCCAGGTTCTGTGTGGCTGGGTTCCGGGGTCTTCAAGCTaGGATCCTGGCCTTGACCAG +
Preference number: 4 (lower is better)
Translates to: FISSQFWQSEVQVLCGWVPGSSS*DPGLDQ
Trigger: CTGGTCAAGGCCAGGATCCCAGCTTGAAGACCCCGG...AACCCAGCCACACAGAACCTGGACTTCTGACTGCCAGAACTGGGAGCTAATGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR CCA 90 bp ACGGACCTGCGGCTAACCATCCTGGAGCTAGAACGGGAGCTGGAGGAGCTGAAGCTGCTTTCCATTCAGTaGGTGTTAGGAAATGTGGGC +
Preference number: 4 (lower is better)
Translates to: TDLRLTILELERELEELKLLSIQ*VLGNVG
Trigger: GCCCACATTTCCTAACACCCACTGAATGGAAAGCAG...CTTCAGCTCCTCCAGCTCCCGTTCTAGCTCCAGGATGGTTAGCCGCAGGTCCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR CCA 90 bp ACTTGTTGGCAGAATTCCGATCCTTGCGGCTGTGGGACTGAGGTCCCCATGTCCAGTCCACACAGGCTGTaGGTAAGGAGCCCCATCATA +
Preference number: 4 (lower is better)
Translates to: TCWQNSDPCGCGTEVPMSSPHRL*VRSPII
Trigger: TATGATGGGGCTCCTTACCCACAGCCTGTGTGGACT...GGACATGGGGACCTCAGTCCCACAGCCGCAAGGATCGGAATTCTGCCAACAAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR CCA 90 bp CATGTATTCATTAGCTCCCAGTTCTGGCAGTCAGAAGTCCAGGTTCTGTGTGGCGCCTCAGTAAGCATGTaGAGGCCCTCAGGGCCCAGC +
Preference number: 4 (lower is better)
Translates to: HVFISSQFWQSEVQVLCGASVSM*RPSGPS
Trigger: GCTGGGCCCTGAGGGCCTCCACATGCTTACTGAGGC...GCCACACAGAACCTGGACTTCTGACTGCCAGAACTGGGAGCTAATGAATACATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR TCA 90 bp CAGACTCACGTCACAGGATTGCAGAGAAGGTCCCAAAGTGACCTCTCTTCCTTGGCTCACCCAGGACGTTaGATTTGCACAGTGGGCAGG +
Preference number: 4 (lower is better)
Translates to: QTHVTGLQRRSQSDLSSLAHPGR*ICTVGR
Trigger: CCTGCCCACTGTGCAAATTCAACGTCCTGGGTGAGC...CAAGGAAGAGAGGTCACTTTGGGACCTTCTCTGCAATCCTGTGACGTGAGTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215798.10
CDS-3UTR TCA 90 bp CACAGATCACATGGAGAGGCAAGTGCAGTCCAACGACATCCGCATCCGGGTCCTGGGACCCCGTTTCTGTaGAGGACAATCTCCAAAAAC +
Preference number: 4 (lower is better)
Translates to: HRSHGEASAVQRHPHPGPGTPFL*RTISKN
Trigger: GTTTTTGGAGATTGTCCTTCACAGAAACGGGGTCCC...AGGACCCGGATGCGGATGTCGTTGGACTGCACTTGCCTCTCCATGTGATCTGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR TCA 90 bp AGTCACAACAGCCAAACGCAGACACAGGTCTGGTTGTCCCCACAGCCTGTGCTCGTGTCAGAGAACATTTaGGGGTCTGAGTGTCAGGCA +
Preference number: 4 (lower is better)
Translates to: SHNSQTQTQVWLSPQPVLVSENI*GSECQA
Trigger: TGCCTGACACTCAGACCCTCAAATGTTCTCTGACAC...GAGCACAGGCTGTGGGGACAACCAGACCTGTGTCTGCGTTTGGCTGTTGTGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR TCA 90 bp TCCCAGAACCCTGGCGACAGCTACACTGGCCCCATATTCTCTTTCCTTATTGACGGTTCCCCAGGACGTTaGATTTGCACAGTGGGCAGG +
Preference number: 4 (lower is better)
Translates to: SQNPGDSYTGPIFSFLIDGSPGR*ICTVGR
Trigger: CCTGCCCACTGTGCAAATTCAACGTCCTGGGGAACC...GTCAATAAGGAAAGAGAATATGGGGCCAGTGTAGCTGTCGCCAGGGTTCTGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382363.8
CDS-3UTR TCA 90 bp TTCATTAGCTCCCAGTTCTGGCAGTCAGAAGTCCAGGTTCTGTGTGGCTGGGTTGGTTCCCCAGGACGTTaGATTTGCACAGTGGGCAGG +
Preference number: 4 (lower is better)
Translates to: FISSQFWQSEVQVLCGWVGSPGR*ICTVGR
Trigger: CCTGCCCACTGTGCAAATTCAACGTCCTGGGGAACC...AACCCAGCCACACAGAACCTGGACTTCTGACTGCCAGAACTGGGAGCTAATGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000630264.1
ENST00000631046.2
CDS-3UTR TCA 90 bp TATTCATTAGCTCCCAGTTCTGGCAGTCAGAAGTCCAGGTTCTGTGTGGCTGGGGGTTCCCCAGGACGTTaGATTTGCACAGTGGGCAGG +
Preference number: 4 (lower is better)
Translates to: YSLAPSSGSQKSRFCVAGGSPGR*ICTVGR
Trigger: CCTGCCCACTGTGCAAATTCAACGTCCTGGGGAACC...CCCAGCCACACAGAACCTGGACTTCTGACTGCCAGAACTGGGAGCTAATGAATA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000630264.1
ENST00000631046.2
CDS-3UTR GCA 90 bp TCCCAGAACCCTGGCGACAGCTACACTGGCCCCATATTCTCTTTCCTTATTGACGCCCACGTATGCCACTaGAATCCAGCCTTCCACTGG +
Preference number: 4 (lower is better)
Translates to: SQNPGDSYTGPIFSFLIDAHVCH*NPAFHW
Trigger: CCAGTGGAAGGCTGGATTGCAGTGGCATACGTGGGC...GTCAATAAGGAAAGAGAATATGGGGCCAGTGTAGCTGTCGCCAGGGTTCTGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215798.10
ENST00000382363.8
CDS-3UTR GCA 90 bp ATCCTGTGGCTTCGAGTATCCCGGTCAGCAACACAAAGCCGCAGCCAAGGATTCGGTCCTCTGCAGCAATaGATCCAACAGCTTGGTGAC +
Preference number: 4 (lower is better)
Translates to: ILWLRVSRSATQSRSQGFGPLQQ*IQQLGD
Trigger: GTCACCAAGCTGTTGGATGCATTGCTGCAGAGGACC...GAATCCTTGGCTGCGGCTTTGTGTTGCTGACCGGGATACTCGAAGCCACAGGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382363.8
CDS-3UTR GCA 90 bp TCCAGAACAGGACGGTTTCTAAGACCTCTGGTCCTAGCCAGGCCCAGGAAGGGACTCACGTCACAGGATTaGAGAGAAGGTCCCAAAGTG +
Preference number: 4 (lower is better)
Translates to: SRTGRFLRPLVLARPRKGLTSQD*REGPKV
Trigger: CACTTTGGGACCTTCTCTGCAATCCTGTGACGTGAG...TCCCTTCCTGGGCCTGGCTAGGACCAGAGGTCTTAGAAACCGTCCTGTTCTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000215798.10
ENST00000382363.8
CDS-3UTR GCA 90 bp ACGGACCTGCGGCTAACCATCCTGGAGCTAGAACGGGAGCTGGAGGAGCTGAAGAGCGTTAGTTCTTCCTaGTTTCCATTCAGTGGGTGT +
Preference number: 4 (lower is better)
Translates to: TDLRLTILELERELEELKSVSSS*FPFSGC
Trigger: ACACCCACTGAATGGAAAGCAGGAAGAACTAACGCT...CTTCAGCTCCTCCAGCTCCCGTTCTAGCTCCAGGATGGTTAGCCGCAGGTCCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR CCA 90 bp GTCACAGGATTGCAGAGAAGGTCCCAAAGTGACCTCTCTTCCTTGACTGACAGGGGCCTGAGCAGAAGCTaGGATATGTCCAGCTCTCGG +
Preference number: 4 (lower is better)
Translates to: VTGLQRRSQSDLSSLTDRGLSRS*DMSSSR
Trigger: CCGAGAGCTGGACATATCCCAGCTTCTGCTCAGGCC...CCTGTCAGTCAAGGAAGAGAGGTCACTTTGGGACCTTCTCTGCAATCCTGTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215798.10
ENST00000382363.8
CDS-3UTR CCA 90 bp GGCAGACTCACGTCACAGGATTGCAGAGAAGGTCCCAAAGTGACCTCTCTTCCTATGGAGGACGATCACTaGCCTGAGCAGAAGCTGGGA +
Preference number: 4 (lower is better)
Translates to: GRLTSQDCREGPKVTSLPMEDDH*PEQKLG
Trigger: TCCCAGCTTCTGCTCAGGCCAGTGATCGTCCTCCAT...AGGAAGAGAGGTCACTTTGGGACCTTCTCTGCAATCCTGTGACGTGAGTCTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000215798.10
ENST00000382363.8
CDS-3UTR CCA 90 bp TCCCAGAACCCTGGCGACAGCTACACTGGCCCCATATTCTCTTTCCTTATTGACATCTCAGCCGTGGCCTaGGTCCTCTGCAGCAATGCA +
Preference number: 4 (lower is better)
Translates to: SQNPGDSYTGPIFSFLIDISAVA*VLCSNA
Trigger: TGCATTGCTGCAGAGGACCCAGGCCACGGCTGAGAT...GTCAATAAGGAAAGAGAATATGGGGCCAGTGTAGCTGTCGCCAGGGTTCTGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215798.10
ENST00000382363.8
CDS-3UTR CCA 90 bp ATCCTGTGGCTTCGAGTATCCCGGTCAGCAACACAAAGCCGCAGCCAAGGATTCACTTCCACTCGATATTaGCAGACAGGGACTCTCCGC +
Preference number: 4 (lower is better)
Translates to: ILWLRVSRSATQSRSQGFTSTRY*QTGTLR
Trigger: GCGGAGAGTCCCTGTCTGCCAATATCGAGTGGAAGT...GAATCCTTGGCTGCGGCTTTGTGTTGCTGACCGGGATACTCGAAGCCACAGGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382363.8
CDS-3UTR CCA 90 bp ACTTGTTGGCAGAATTCCGATCCTTGCGGCTGTGGGACTGAGGTCCCCATGTCCCCAAGCTCCACTTGTTaGCAGAATTCCGATCCTTGC +
Preference number: 4 (lower is better)
Translates to: TCWQNSDPCGCGTEVPMSPSSTC*QNSDPC
Trigger: GCAAGGATCGGAATTCTGCCAACAAGTGGAGCTTGG...GGACATGGGGACCTCAGTCCCACAGCCGCAAGGATCGGAATTCTGCCAACAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332468.5
ENST00000421022.1
ENST00000630264.1
ENST00000631046.2
CDS-3UTR CCA 90 bp ATCATCCAGGCCCTTCTGTCCCCTTCTCAACCACCTTGTGAGGCAGGTCATAGCCCCCTTCTTGGTTCTTaGAATGGGTCCCCAAACCAC +
Preference number: 4 (lower is better)
Translates to: IIQALLSPSQPPCEAGHSPLLGS*NGSPNH
Trigger: GTGGTTTGGGGACCCATTCCAAGAACCAAGAAGGGG...GCTATGACCTGCCTCACAAGGTGGTTGAGAAGGGGACAGAAGGGCCTGGATGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR CCA 90 bp GATGACCAAACTGGGTTGCCACCTCCTACCGAGAAAGCGCCTTCTATTTTCCAAGGGTGCAGGGAGGGATaGCCACATCTGCCATGGGAA +
Preference number: 4 (lower is better)
Translates to: DDQTGLPPPTEKAPSIFQGCREG*PHLPWE
Trigger: TTCCCATGGCAGATGTGGCCATCCCTCCCTGCACCC...TTGGAAAATAGAAGGCGCTTTCTCGGTAGGAGGTGGCAACCCAGTTTGGTCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR CCA 90 bp AGGACTCAGGATACAACTGAGGCAAGGCCAGGCCTGGCTTCACAGAGCTCCCTGCAGCCTCTCTGGTTGTaGCAAAAGCCATTAGAGACA +
Preference number: 4 (lower is better)
Translates to: RTQDTTEARPGLASQSSLQPLWL*QKPLET
Trigger: TGTCTCTAATGGCTTTTGCCACAACCAGAGAGGCTG...CAGGGAGCTCTGTGAAGCCAGGCCTGGCCTTGCCTCAGTTGTATCCTGAGTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR CCA 90 bp AGTCACAACAGCCAAACGCAGACACAGGTCTGGTTGTCCCCACAGCCTGTGCTCGCAGAGCAGCCTCTCTaGTTGTGGCAAAAGCCATTA +
Preference number: 4 (lower is better)
Translates to: SHNSQTQTQVWLSPQPVLAEQPL*LWQKPL
Trigger: TAATGGCTTTTGCCACAACCAGAGAGGCTGCTCTGC...GAGCACAGGCTGTGGGGACAACCAGACCTGTGTCTGCGTTTGGCTGTTGTGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332468.5
3UTR CAA 72 bp CCCCTCCAGACCCCTAAAGCACTAGGGCAAATCCTTTaGCAGAGCTGGCAGGAAGATGTGCAGTTAGCTGCT +
Preference number: 4 (lower is better)
Translates to: PLQTPKALGQIL*QSWQEDVQLAA
Trigger: AGCAGCTAACTGCACATCTTCCTGCCAGCTCTGCAAAAGGATTTGCCCTAGTGCTTTAGGGGTCTGGAGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332468.5
3UTR CAA 72 bp GCCTTTCTACCCCAAGTGGGTGCTGTTCTCTGTGCCTaGCAAACTGTCACAGCCGCCATGTATCAGGTGTCT +
Preference number: 4 (lower is better)
Translates to: AFLPQVGAVLCA*QTVTAAMYQVS
Trigger: AGACACCTGATACATGGCGGCTGTGACAGTTTGCAAGGCACAGAGAACAGCACCCACTTGGGGTAGAAAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR TCA 90 bp GTCACAGGATTGCAGAGAAGGTCCCAAAGTGACCTCTCTTCCTTGACTGACAGGCGTTGTGGTTCAGGATaGGAAGAAGCAGGGCAGAGG +
Preference number: 4 (lower is better)
Translates to: VTGLQRRSQSDLSSLTDRRCGSG*EEAGQR
Trigger: CCTCTGCCCTGCTTCTTCTCATCCTGAACCACAACG...CCTGTCAGTCAAGGAAGAGAGGTCACTTTGGGACCTTCTCTGCAATCCTGTGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000215798.10
ENST00000382363.8
CDS-3UTR TCA 90 bp GTATTCATTAGCTCCCAGTTCTGGCAGTCAGAAGTCCAGGTTCTGTGTGGCTGGCTTGAGCTGGCCGTGTaGCCTTGGACAGCTCACTTT +
Preference number: 4 (lower is better)
Translates to: VFISSQFWQSEVQVLCGWLELAV*PWTAHF
Trigger: AAAGTGAGCTGTCCAAGGTCACACGGCCAGCTCAAG...CCAGCCACACAGAACCTGGACTTCTGACTGCCAGAACTGGGAGCTAATGAATAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR TCA 90 bp TATTCATTAGCTCCCAGTTCTGGCAGTCAGAAGTCCAGGTTCTGTGTGGCTGGGCTCCATCCAGGACGTTaGATTTGCACAGTGGGCAGG +
Preference number: 4 (lower is better)
Translates to: YSLAPSSGSQKSRFCVAGLHPGR*ICTVGR
Trigger: CCTGCCCACTGTGCAAATTCAACGTCCTGGATGGAG...CCCAGCCACACAGAACCTGGACTTCTGACTGCCAGAACTGGGAGCTAATGAATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421022.1
CDS-3UTR CCA 90 bp GTCACAGGATTGCAGAGAAGGTCCCAAAGTGACCTCTCTTCCTTGACTGACAGGATGGAGGACGATCACTaGCCTGAGCAGAAGCTGGGA +
Preference number: 4 (lower is better)
Translates to: VTGLQRRSQSDLSSLTDRMEDDH*PEQKLG
Trigger: TCCCAGCTTCTGCTCAGGCCAGTGATCGTCCTCCAT...CCTGTCAGTCAAGGAAGAGAGGTCACTTTGGGACCTTCTCTGCAATCCTGTGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000215798.10
ENST00000382363.8
CDS-3UTR CCA 90 bp AATCAAGCCCCACACAGTGTGGCGGTTAAGAACGCAGGCCTTGGGGATCATGCCGTTCTGGGGAAGAATTaGCTTCCAAGCTCCACTTGT +
Preference number: 4 (lower is better)
Translates to: NQAPHSVAVKNAGLGDHAVLGKN*LPSSTC
Trigger: ACAAGTGGAGCTTGGAAGCCAATTCTTCCCCAGAAC...GGCATGATCCCCAAGGCCTGCGTTCTTAACCGCCACACTGTGTGGGGCTTGATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR CCA 90 bp GATGACCAAACTGGGTTGCCACCTCCTACCGAGAAAGCGCCTTCTATTTTCCAAATTCTCCCGGGCTCCTaGAGCCAGAAGGAAGCATCC +
Preference number: 4 (lower is better)
Translates to: DDQTGLPPPTEKAPSIFQILPGS*SQKEAS
Trigger: GGATGCTTCCTTCTGGCTCCAGGAGCCCGGGAGAAT...TTGGAAAATAGAAGGCGCTTTCTCGGTAGGAGGTGGCAACCCAGTTTGGTCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR CCA 90 bp AGTCACAACAGCCAAACGCAGACACAGGTCTGGTTGTCCCCACAGCCTGTGCTCGCTAGGTACCCATCTTaGCACAGGATTGGATATCAG +
Preference number: 4 (lower is better)
Translates to: SHNSQTQTQVWLSPQPVLARYPS*HRIGYQ
Trigger: CTGATATCCAATCCTGTGCCAAGATGGGTACCTAGC...GAGCACAGGCTGTGGGGACAACCAGACCTGTGTCTGCGTTTGGCTGTTGTGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332468.5
ENST00000619645.1
CDS-3UTR CCA 90 bp CACAACAGCCAAACGCAGACACAGGTCTGGTTGTCCCCACAGCCTGTGCTCTTCTCTTGGTTCTTGGAATaGGTCCCCAAACCACACCAT +
Preference number: 4 (lower is better)
Translates to: HNSQTQTQVWLSPQPVLFSWFLE*VPKPHH
Trigger: ATGGTGTGGTTTGGGGACCCATTCCAAGAACCAAGA...GAAGAGCACAGGCTGTGGGGACAACCAGACCTGTGTCTGCGTTTGGCTGTTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332468.5
ENST00000619645.1
CDS-3UTR CCA 90 bp TGTCCCCACAGCCTGTGCTCTTCACTACGTCACATGCTAATTCTTGCTCGACTTTCCATGGTAGGGGACTaGGGATGGTGCCAAGGGCAT +
Preference number: 4 (lower is better)
Translates to: CPHSLCSSLRHMLILARLSMVGD*GWCQGH
Trigger: ATGCCCTTGGCACCATCCCCAGTCCCCTACCATGGA...AAGTCGAGCAAGAATTAGCATGTGACGTAGTGAAGAGCACAGGCTGTGGGGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR CCA 90 bp GTCACAACAGCCAAACGCAGACACAGGTCTGGTTGTCCCCACAGCCTGTGCTCTGAATTCCTCTCCAAGTaGGGTCTGTGTATGACTGGA +
Preference number: 4 (lower is better)
Translates to: VTTAKRRHRSGCPHSLCSEFLSK*GLCMTG
Trigger: TCCAGTCATACACAGACCCCACTTGGAGAGGAATTC...AGAGCACAGGCTGTGGGGACAACCAGACCTGTGTCTGCGTTTGGCTGTTGTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR CCA 90 bp TGTGGAGAGCCCACCTCATCACATGAGGCCTTAGGCTGTGCTTTTGTGAAACATAGCCAGGGGTGTGGCTaGATGAGCATCGTCCATCTC +
Preference number: 4 (lower is better)
Translates to: CGEPTSSHEALGCAFVKHSQGCG*MSIVHL
Trigger: GAGATGGACGATGCTCATCCAGCCACACCCCTGGCT...ATGTTTCACAAAAGCACAGCCTAAGGCCTCATGTGATGAGGTGGGCTCTCCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR CCA 90 bp GGATTCCAGAACAGGACGGTTTCTAAGACCTCTGGTCCTAGCCAGGCCCAGGAAACCACATTGATCCTGTaGCTTCGAGTATCCCGGTCA +
Preference number: 4 (lower is better)
Translates to: GFQNRTVSKTSGPSQAQETTLIL*LRVSRS
Trigger: TGACCGGGATACTCGAAGCCACAGGATCAATGTGGT...TTCCTGGGCCTGGCTAGGACCAGAGGTCTTAGAAACCGTCCTGTTCTGGAATCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382363.8
3UTR CAA 72 bp CAGGTTGCGTTCCTTTCTGCCGGTTCTGGGGAAGAATaGGCTTCCAAGCTCCACTTGTTGGCAGAATTCCGA +
Preference number: 4 (lower is better)
Translates to: QVAFLSAGSGEE*ASKLHLLAEFR
Trigger: TCGGAATTCTGCCAACAAGTGGAGCTTGGAAGCCAATTCTTCCCCAGAACCGGCAGAAAGGAACGCAACCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332468.5
ENST00000421022.1
ENST00000630264.1
ENST00000631046.2
CDS-3UTR TCA 90 bp GATGACCAAACTGGGTTGCCACCTCCTACCGAGAAAGCGCCTTCTATTTTCCAAGCCCACCTCATCACATaGGGCCTTAGGCTGTGCTTT +
Preference number: 4 (lower is better)
Translates to: DDQTGLPPPTEKAPSIFQAHLIT*GLRLCF
Trigger: AAAGCACAGCCTAAGGCCTCATGTGATGAGGTGGGC...TTGGAAAATAGAAGGCGCTTTCTCGGTAGGAGGTGGCAACCCAGTTTGGTCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR TCA 90 bp GTATTCATTAGCTCCCAGTTCTGGCAGTCAGAAGTCCAGGTTCTGTGTGGCTGGGCCAGCCAGGAGCCCTaGATATCTGACTACCAAGTT +
Preference number: 4 (lower is better)
Translates to: VFISSQFWQSEVQVLCGWASQEP*ISDYQV
Trigger: AACTTGGTAGTCAGATATTCAGGGCTCCTGGCTGGC...CCAGCCACACAGAACCTGGACTTCTGACTGCCAGAACTGGGAGCTAATGAATAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR GCA 90 bp TATTCATTAGCTCCCAGTTCTGGCAGTCAGAAGTCCAGGTTCTGTGTGGCTGGGAGGCATCTACCAGGTTaGGTTCCTTTCTGCCGGTTC +
Preference number: 4 (lower is better)
Translates to: YSLAPSSGSQKSRFCVAGRHLPG*VPFCRF
Trigger: GAACCGGCAGAAAGGAACGCAACCTGGTAGATGCCT...CCCAGCCACACAGAACCTGGACTTCTGACTGCCAGAACTGGGAGCTAATGAATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332468.5
ENST00000421022.1
ENST00000630264.1
ENST00000631046.2
CDS-3UTR GCA 90 bp GTATTCATTAGCTCCCAGTTCTGGCAGTCAGAAGTCCAGGTTCTGTGTGGCTGGGGCGGCTCCAATCAATaGTGTCCAAAATCCGGGAAG +
Preference number: 4 (lower is better)
Translates to: VFISSQFWQSEVQVLCGWGGSNQ*CPKSGK
Trigger: CTTCCCGGATTTTGGACAGCATTGATTGGAGCCGCC...CCAGCCACACAGAACCTGGACTTCTGACTGCCAGAACTGGGAGCTAATGAATAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR GCA 90 bp ACTTGTTGGCAGAATTCCGATCCTTGCGGCTGTGGGACTGAGGTCCCCATGTCCTCACATGCTAATTCTTaGTCGACTTCTGTGTGTCCC +
Preference number: 4 (lower is better)
Translates to: TCWQNSDPCGCGTEVPMSSHANS*STSVCP
Trigger: GGGACACACAGAAGTCGAGCAAGAATTAGCATGTGA...GGACATGGGGACCTCAGTCCCACAGCCGCAAGGATCGGAATTCTGCCAACAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR GCA 90 bp CCAGCGTTAGTTCTTCCTGCTTTCCATTCAGTGGGTGTTAGGAAATGTGGGCTTGGCCAACTGAGTGCCTaGAGGCCTGTCCCATGTCTT +
Preference number: 4 (lower is better)
Translates to: PALVLPAFHSVGVRKCGLGQLSA*RPVPCL
Trigger: AAGACATGGGACAGGCCTGCAGGCACTCAGTTGGCC...AAGCCCACATTTCCTAACACCCACTGAATGGAAAGCAGGAAGAACTAACGCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR GCA 90 bp AGTCACAACAGCCAAACGCAGACACAGGTCTGGTTGTCCCCACAGCCTGTGCTCACCTTCCCAACACCATaGATACAATCAGATCAAGCC +
Preference number: 4 (lower is better)
Translates to: SHNSQTQTQVWLSPQPVLTFPTP*IQSDQA
Trigger: GGCTTGATCTGATTGTATGCATGGTGTTGGGAAGGT...GAGCACAGGCTGTGGGGACAACCAGACCTGTGTCTGCGTTTGGCTGTTGTGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR CCA 90 bp TCCCAGAACCCTGGCGACAGCTACACTGGCCCCATATTCTCTTTCCTTATTGACACTTCCACTCGATATTaGCAGACAGGGACTCTCCGC +
Preference number: 4 (lower is better)
Translates to: SQNPGDSYTGPIFSFLIDTSTRY*QTGTLR
Trigger: GCGGAGAGTCCCTGTCTGCCAATATCGAGTGGAAGT...GTCAATAAGGAAAGAGAATATGGGGCCAGTGTAGCTGTCGCCAGGGTTCTGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215798.10
ENST00000382363.8
CDS-3UTR CCA 90 bp CAGACTCACGTCACAGGATTGCAGAGAAGGTCCCAAAGTGACCTCTCTTCCTTGTGTGCAGAGTCCAGCTaGGCAGCTAATCATCGGAGT +
Preference number: 4 (lower is better)
Translates to: QTHVTGLQRRSQSDLSSLCAESS*AANHRS
Trigger: ACTCCGATGATTAGCTGCCCAGCTGGACTCTGCACA...CAAGGAAGAGAGGTCACTTTGGGACCTTCTCTGCAATCCTGTGACGTGAGTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000215798.10
ENST00000382363.8
CDS-3UTR TCA 90 bp GCTCTCTCAGGCGCCCACCAACTCCGTGCCATGTATTCATTAGCTCCCAGTTCTTGGCCAGGATGGTCTTaGTCTCTTGACTTAATGATC +
Preference number: 4 (lower is better)
Translates to: ALSGAHQLRAMYSLAPSSWPGWS*SLDLMI
Trigger: GATCATTAAGTCAAGAGATCAAGACCATCCTGGCCA...AGAACTGGGAGCTAATGAATACATGGCACGGAGTTGGTGGGCGCCTGAGAGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR TCA 90 bp TATTCATTAGCTCCCAGTTCTGGCAGTCAGAAGTCCAGGTTCTGTGTGGCTGGGCTGGCTGTAGTAAGCTaGGTCAGAGTAACAGAGGGA +
Preference number: 4 (lower is better)
Translates to: YSLAPSSGSQKSRFCVAGLAVVS*VRVTEG
Trigger: TCCCTCTGTTACTCTGACTCAGCTTACTACAGCCAG...CCCAGCCACACAGAACCTGGACTTCTGACTGCCAGAACTGGGAGCTAATGAATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR GCA 90 bp TCACAACAGCCAAACGCAGACACAGGTCTGGTTGTCCCCACAGCCTGTGCTCTTTCACATGCTAATTCTTaGTCGACTTCTGTGTGTCCC +
Preference number: 4 (lower is better)
Translates to: SQQPNADTGLVVPTACALSHANS*STSVCP
Trigger: GGGACACACAGAAGTCGAGCAAGAATTAGCATGTGA...AAGAGCACAGGCTGTGGGGACAACCAGACCTGTGTCTGCGTTTGGCTGTTGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332468.5
ENST00000619645.1
CDS-3UTR GCA 90 bp CATGTATTCATTAGCTCCCAGTTCTGGCAGTCAGAAGTCCAGGTTCTGTGTGGCTGTCCCCACAGCCTGTaGTCTTCACTACGTCACATG +
Preference number: 4 (lower is better)
Translates to: HVFISSQFWQSEVQVLCGCPHSL*SSLRHM
Trigger: CATGTGACGTAGTGAAGAGCACAGGCTGTGGGGACA...GCCACACAGAACCTGGACTTCTGACTGCCAGAACTGGGAGCTAATGAATACATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR GCA 90 bp CATGTATTCATTAGCTCCCAGTTCTGGCAGTCAGAAGTCCAGGTTCTGTGTGGCACCACAGCACGCAAGTaGTTCATGCGTCATCCACTC +
Preference number: 4 (lower is better)
Translates to: HVFISSQFWQSEVQVLCGTTARK*FMRHPL
Trigger: GAGTGGATGACGCATGAAGCACTTGCGTGCTGTGGT...GCCACACAGAACCTGGACTTCTGACTGCCAGAACTGGGAGCTAATGAATACATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR GCA 90 bp TGTGGAGAGCCCACCTCATCACATGAGGCCTTAGGCTGTGCTTTTGTGAAACATAGGGATGGCCACATCTaGCATGGGAATCCAGAATGG +
Preference number: 4 (lower is better)
Translates to: CGEPTSSHEALGCAFVKHRDGHI*HGNPEW
Trigger: CCATTCTGGATTCCCATGGCAGATGTGGCCATCCCT...ATGTTTCACAAAAGCACAGCCTAAGGCCTCATGTGATGAGGTGGGCTCTCCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR GCA 90 bp TATTCATTAGCTCCCAGTTCTGGCAGTCAGAAGTCCAGGTTCTGTGTGGCTGGGATGACCAAACTGGGTTaGCACCTCCTACCGAGAAAG +
Preference number: 4 (lower is better)
Translates to: YSLAPSSGSQKSRFCVAGMTKLG*HLLPRK
Trigger: CTTTCTCGGTAGGAGGTGGCAACCCAGTTTGGTCAT...CCCAGCCACACAGAACCTGGACTTCTGACTGCCAGAACTGGGAGCTAATGAATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR CCA 90 bp GTCACAGGATTGCAGAGAAGGTCCCAAAGTGACCTCTCTTCCTTGACTGACAGGTCTCGGACCACGTTGTaGTTCAGGATGAGAAGAAGC +
Preference number: 4 (lower is better)
Translates to: VTGLQRRSQSDLSSLTDRSRTTL*FRMRRS
Trigger: GCTTCTTCTCATCCTGAACCACAACGTGGTCCGAGA...CCTGTCAGTCAAGGAAGAGAGGTCACTTTGGGACCTTCTCTGCAATCCTGTGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000215798.10
ENST00000382363.8
CDS-3UTR CCA 90 bp TCCCAGAACCCTGGCGACAGCTACACTGGCCCCATATTCTCTTTCCTTATTGACCTTTCCTTATTGACCTaGGAGCTGCCTGTAAGGAGG +
Preference number: 4 (lower is better)
Translates to: SQNPGDSYTGPIFSFLIDLSLLT*ELPVRR
Trigger: CCTCCTTACAGGCAGCTCCCAGGTCAATAAGGAAAG...GTCAATAAGGAAAGAGAATATGGGGCCAGTGTAGCTGTCGCCAGGGTTCTGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215798.10
ENST00000382363.8
CDS-3UTR CCA 90 bp GTCACAGGATTGCAGAGAAGGTCCCAAAGTGACCTCTCTTCCTTGACTGACAGGTGGCGACAGCTACACTaGCCCCATATTCTCTTTCCT +
Preference number: 4 (lower is better)
Translates to: VTGLQRRSQSDLSSLTDRWRQLH*PHILFP
Trigger: AGGAAAGAGAATATGGGGCCAGTGTAGCTGTCGCCA...CCTGTCAGTCAAGGAAGAGAGGTCACTTTGGGACCTTCTCTGCAATCCTGTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215798.10
ENST00000382363.8
CDS-3UTR CCA 90 bp GTATTCATTAGCTCCCAGTTCTGGCAGTCAGAAGTCCAGGTTCTGTGTGGCTGGCCAAGCTCCACTTGTTaGCAGAATTCCGATCCTTGC +
Preference number: 4 (lower is better)
Translates to: VFISSQFWQSEVQVLCGWPSSTC*QNSDPC
Trigger: GCAAGGATCGGAATTCTGCCAACAAGTGGAGCTTGG...CCAGCCACACAGAACCTGGACTTCTGACTGCCAGAACTGGGAGCTAATGAATAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332468.5
ENST00000421022.1
ENST00000630264.1
ENST00000631046.2
3UTR CAA 72 bp CTGACCAACCACACTATTGGCGATGACCAAACTGGGTaGCCACCTCCTACCGAGAAAGCGCCTTCTATTTTC +
Preference number: 4 (lower is better)
Translates to: LTNHTIGDDQTG*PPPTEKAPSIF
Trigger: GAAAATAGAAGGCGCTTTCTCGGTAGGAGGTGGCAACCCAGTTTGGTCATCGCCAATAGTGTGGTTGGTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332468.5
3UTR CAA 72 bp GGAACCGAGGTATGTATCCACTTGCACTGTCAGTCATaGAGGGCTACTTCCAGAGAGTTATTCCCCTGGCAC +
Preference number: 4 (lower is better)
Translates to: GTEVCIHLHCQS*RATSRELFPWH
Trigger: GTGCCAGGGGAATAACTCTCTGGAAGTAGCCCTCAATGACTGACAGTGCAAGTGGATACATACCTCGGTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR TCA 90 bp TCACAACAGCCAAACGCAGACACAGGTCTGGTTGTCCCCACAGCCTGTGCTCTTAGGAAACAGCCTTATTaGGTGAGGTTAAGGAAGTTG +
Preference number: 4 (lower is better)
Translates to: SQQPNADTGLVVPTACALRKQPY*VRLRKL
Trigger: CAACTTCCTTAACCTCACTCAATAAGGCTGTTTCCT...AAGAGCACAGGCTGTGGGGACAACCAGACCTGTGTCTGCGTTTGGCTGTTGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR CCA 90 bp TCATTAGCTCCCAGTTCTGGCAGTCAGAAGTCCAGGTTCTGTGTGGCTGGGTTTGTTCTGGGGAAGAATTaGCTTCCAAGCTCCACTTGT +
Preference number: 4 (lower is better)
Translates to: SLAPSSGSQKSRFCVAGFVLGKN*LPSSTC
Trigger: ACAAGTGGAGCTTGGAAGCCAATTCTTCCCCAGAAC...AAACCCAGCCACACAGAACCTGGACTTCTGACTGCCAGAACTGGGAGCTAATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332468.5
ENST00000421022.1
ENST00000630264.1
ENST00000631046.2
CDS-3UTR CCA 90 bp TTCATTAGCTCCCAGTTCTGGCAGTCAGAAGTCCAGGTTCTGTGTGGCTGGGTTTCTTGGTTCTTGGAATaGGTCCCCAAACCACACCAT +
Preference number: 4 (lower is better)
Translates to: FISSQFWQSEVQVLCGWVSWFLE*VPKPHH
Trigger: ATGGTGTGGTTTGGGGACCCATTCCAAGAACCAAGA...AACCCAGCCACACAGAACCTGGACTTCTGACTGCCAGAACTGGGAGCTAATGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR CCA 90 bp GTATTCATTAGCTCCCAGTTCTGGCAGTCAGAAGTCCAGGTTCTGTGTGGCTGGGCTCTGACATCCCTGTaGGACTTTGGAAAAATCTTG +
Preference number: 4 (lower is better)
Translates to: VFISSQFWQSEVQVLCGWALTSL*DFGKIL
Trigger: CAAGATTTTTCCAAAGTCCCACAGGGATGTCAGAGC...CCAGCCACACAGAACCTGGACTTCTGACTGCCAGAACTGGGAGCTAATGAATAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000332468.5
3UTR CAA 72 bp TGTCACCCCCATTTTACGAATGAGGAAACAGCCTTATaGAGTGAGGTTAAGGAAGTTGCCCAAGGCCACACA +
Preference number: 4 (lower is better)
Translates to: CHPHFTNEETAL*SEVKEVAQGHT
Trigger: TGTGTGGCCTTGGGCAACTTCCTTAACCTCACTCAATAAGGCTGTTTCCTCATTCGTAAAATGGGGGTGACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000332468.5
3UTR CAA 72 bp ACATCCCTGTGGGACTTTGGAAAAATCTTGCCTACTTaGAACCGCAGTTTCTTCATCTATACAACGGAGGTC +
Preference number: 4 (lower is better)
Translates to: TSLWDFGKILPT*NRSFFIYTTEV
Trigger: GACCTCCGTTGTATAGATGAAGAAACTGCGGTTCAAAGTAGGCAAGATTTTTCCAAAGTCCCACAGGGATGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS GCA 90 bp AGGTCCACCTGGCCTCCGAGCTCCCGCTGGCTCTGCCGCGACGCCTaGCGCTGGGCCTGGACCACGAGGCCTGTGCACAGGAGCATGGCC +
Preference number: 5 (lower is better)
Translates to: RSTWPPSSRWLCRDA*RWAWTTRPVHRSMA
Trigger: GGCCATGCTCCTGTGCACAGGCCTCGTGGTCCAGGCCCAGCGGCAGGCGTCGCGGCAGAGCCAGCGGGAGCTCGGAGGCCAGGTGGACCT
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000215798.10
ENST00000382363.8
ENST00000463319.1
CDS CCA 90 bp CCTCCGAGCTCCCGCTGGCTCTGCCGCGACGCCTGCCGCTGGGCCTaGACCACGAGGCCTGTGCACAGGAGCATGGCCACCAGCAGGATG +
Preference number: 5 (lower is better)
Translates to: PPSSRWLCRDACRWA*TTRPVHRSMATSRM
Trigger: CATCCTGCTGGTGGCCATGCTCCTGTGCACAGGCCTCGTGGTCCAGGCCCAGCGGCAGGCGTCGCGGCAGAGCCAGCGGGAGCTCGGAGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000215798.10
ENST00000382363.8
ENST00000463319.1
CDS GCA 90 bp GCACACCGCACAGGTCTCAGCACCCGGATCTGGGAGGCCCTGCGCTaGCCTGCTCAGCCGGCAGCGCCGTGTCTTGAGGGATGCCAGTCT +
Preference number: 5 (lower is better)
Translates to: AHRTGLSTRIWEALR*PAQPAAPCLEGCQS
Trigger: AGACTGGCATCCCTCAAGACACGGCGCTGCCGGCTGAGCAGGGCAGCGCAGGGCCTCCCAGATCCGGGTGCTGAGACCTGTGCGGTGTGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000215798.10
ENST00000382363.8
ENST00000463319.1
CDS GCA 90 bp GCCGCATCTGCTGGACCAGGGCCTTGGGATAGGCCTGCGGGCCACTaGCCTTATTCTCCTGGTGGAACTGGGCCGCCTGCTCCTTGCCCA +
Preference number: 5 (lower is better)
Translates to: AASAGPGPWDRPAGH*PYSPGGTGPPAPCP
Trigger: TGGGCAAGGAGCAGGCGGCCCAGTTCCACCAGGAGAATAAGGGCAGTGGCCCGCAGGCCTATCCCAAGGCCCTGGTCCAGCAGATGCGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215798.10
ENST00000382363.8
ENST00000431544.2
ENST00000473077.1
CDS CCA 90 bp CCTGGACCACGAGGCCTGTGCACAGGAGCATGGCCACCAGCAGGATaGCGTTCCACAGCTGCTGCAGGGGTTTCTGCTCCTGGGCACGAC +
Preference number: 5 (lower is better)
Translates to: PGPRGLCTGAWPPAG*RSTAAAGVSAPGHD
Trigger: GTCGTGCCCAGGAGCAGAAACCCCTGCAGCAGCTGTGGAACGCCATCCTGCTGGTGGCCATGCTCCTGTGCACAGGCCTCGTGGTCCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000215798.10
ENST00000382363.8
ENST00000463319.1
CDS-3UTR CAA 90 bp AGACAGGCCACAGGGAGCTCCCAGAACCCTGGCGACAGCTACACTGGCCCCATACGGCAGCGCCGTGTCTaGAGGGATGCCAGTCTCCGC +
Preference number: 5 (lower is better)
Translates to: RQATGSSQNPGDSYTGPIRQRRV*RDASLR
Trigger: GCGGAGACTGGCATCCCTCAAGACACGGCGCTGCCG...TATGGGGCCAGTGTAGCTGTCGCCAGGGTTCTGGGAGCTCCCTGTGGCCTGTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215798.10
ENST00000382363.8
CDS-3UTR CAA 90 bp CTGGCCACTGTAGTCTCAGCCCCCAGGAATTCCCAGACAGGCCACAGGGAGCTCCGGCAGCGCCGTGTCTaGAGGGATGCCAGTCTCCGC +
Preference number: 5 (lower is better)
Translates to: LATVVSAPRNSQTGHRELRQRRV*RDASLR
Trigger: GCGGAGACTGGCATCCCTCAAGACACGGCGCTGCCG...GAGCTCCCTGTGGCCTGTCTGGGAATTCCTGGGGGCTGAGACTACAGTGGCCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000215798.10
ENST00000382363.8
CDS-3UTR CAA 90 bp GCGGCTGTGGGACTGAGGTCCCCATGTCCTCGCTGGCTGGCTGTAAGCCAGGTCCTCTGCCCCGGGAACTaGTGGAGAGCCCACCTCATC +
Preference number: 5 (lower is better)
Translates to: AAVGLRSPCPRWLAVSQVLCPGN*WRAHLI
Trigger: GATGAGGTGGGCTCTCCACAAGTTCCCGGGGCAGAG...GACCTGGCTTACAGCCAGCCAGCGAGGACATGGGGACCTCAGTCCCACAGCCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR CAA 90 bp GCTGCAGAGCGAGCGGGAGCAGGGGCAATGCCAGCTCAGGGCCCAGCAGGTGAGTGGGGGTCTTCCTTTTaGCCAGAGAAGTCTCCGGCC +
Preference number: 5 (lower is better)
Translates to: AAERAGAGAMPAQGPAGEWGSSF*PEKSPA
Trigger: GGCCGGAGACTTCTCTGGCAAAAAGGAAGACCCCCA...CTCACCTGCTGGGCCCTGAGCTGGCATTGCCCCTGCTCCCGCTCGCTCTGCAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR CAA 90 bp AGGGCCCGGGGCATAGCTGTGCTCTGGGCAATGGGGCCTCACAGGAGTCCTCAGTCCCCAGTGCTAGGCTaGCCCCAGACCTGCCAAGAG +
Preference number: 5 (lower is better)
Translates to: RARGIAVLWAMGPHRSPQSPVLG*PQTCQE
Trigger: CTCTTGGCAGGTCTGGGGCAAGCCTAGCACTGGGGA...CTGAGGACTCCTGTGAGGCCCCATTGCCCAGAGCACAGCTATGCCCCGGGCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR CAA 90 bp GCGGCTGTGGGACTGAGGTCCCCATGTCCTCGCTGGCTGGCTGTAAGCCAGGTCGCCCCTGGGTTAGGTTaGAAGCTGGCCCAGCAGAGC +
Preference number: 5 (lower is better)
Translates to: AAVGLRSPCPRWLAVSQVAPGLG*KLAQQS
Trigger: GCTCTGCTGGGCCAGCTTCAAACCTAACCCAGGGGC...GACCTGGCTTACAGCCAGCCAGCGAGGACATGGGGACCTCAGTCCCACAGCCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS GCA 90 bp CCTCCTTGCTGGGGCCAGTCCTCTCTGCCCACAGAGCCACTTCCTTaGTCCAAGCTCCAGGCTCTGGCACCTCCTTCCCATCCCCTCACC +
Preference number: 5 (lower is better)
Translates to: PPCWGQSSLPTEPLP*SKLQALAPPSHPLT
Trigger: GGTGAGGGGATGGGAAGGAGGTGCCAGAGCCTGGAGCTTGGAGCAAGGAAGTGGCTCTGTGGGCAGAGAGGACTGGCCCCAGCAAGGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000463319.1
CDS-3UTR CAA 90 bp GACCGGGGTGCAGGCAGGAAGGGTCCATCCCCATGTGCAGAGTCCAGCTGGGCATCCCACCCACTGGGCTaGCTGTCCTGTCTATCCTGC +
Preference number: 5 (lower is better)
Translates to: DRGAGRKGPSPCAESSWASHPLG*LSCLSC
Trigger: GCAGGATAGACAGGACAGCAAGCCCAGTGGGTGGGA...TGCCCAGCTGGACTCTGCACATGGGGATGGACCCTTCCTGCCTGCACCCCGGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000215798.10
ENST00000382363.8
CDS-3UTR CAA 90 bp AAGTTCCTGGCACCAGAAGATGGCCAGTGCCCACTGATGGGAGGCCTGAGGGATGCGCAGGTGCAGCTGTaGGTGGGTCGGCTGGAGGGC +
Preference number: 5 (lower is better)
Translates to: KFLAPEDGQCPLMGGLRDAQVQL*VGRLEG
Trigger: GCCCTCCAGCCGACCCACCAACAGCTGCACCTGCGC...ATCCCTCAGGCCTCCCATCAGTGGGCACTGGCCATCTTCTGGTGCCAGGAACTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS GCA 90 bp CTCCTGGTGGAACTGGGCCGCCTGCTCCTTGCCCACGTATGCCACTaGAATCCAGCCTTCCACTGGTGCCTCCTGCTCGGCATCCACGAT +
Preference number: 5 (lower is better)
Translates to: LLVELGRLLLAHVCH*NPAFHWCLLLGIHD
Trigger: ATCGTGGATGCCGAGCAGGAGGCACCAGTGGAAGGCTGGATTGCAGTGGCATACGTGGGCAAGGAGCAGGCGGCCCAGTTCCACCAGGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215798.10
ENST00000382363.8
ENST00000431544.2
ENST00000473077.1
CDS GCA 90 bp GCCTGCGGGCCACTGCCCTTATTCTCCTGGTGGAACTGGGCCGCCTaGTCCTTGCCCACGTATGCCACTGCAATCCAGCCTTCCACTGGT +
Preference number: 5 (lower is better)
Translates to: ACGPLPLFSWWNWAA*SLPTYATAIQPSTG
Trigger: ACCAGTGGAAGGCTGGATTGCAGTGGCATACGTGGGCAAGGAGCAGGCGGCCCAGTTCCACCAGGAGAATAAGGGCAGTGGCCCGCAGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215798.10
ENST00000382363.8
ENST00000431544.2
ENST00000473077.1
CDS-3UTR CAA 90 bp GTCCCCATGTCCTCGCTGGCTGGCTGTAAGCCAGGTCCTCTCACGGCTCCTAGAGCTGGGATCCTGGCCTaGACCAGGTCCGGTGTGCAT +
Preference number: 5 (lower is better)
Translates to: VPMSSLAGCKPGPLTAPRAGILA*TRSGVH
Trigger: ATGCACACCGGACCTGGTCAAGGCCAGGATCCCAGC...TCTAGGAGCCGTGAGAGGACCTGGCTTACAGCCAGCCAGCGAGGACATGGGGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR CAA 90 bp CCTCTCACGGCTCCTAGAGGCCGTCCACCTTCCTTGCCATGGGGCTCCCTCCATAGGAGGAGGTGGCCTTaGAGCTGGACGCCCATGACA +
Preference number: 5 (lower is better)
Translates to: PLTAPRGRPPSLPWGSLHRRRWP*SWTPMT
Trigger: TGTCATGGGCGTCCAGCTCAAAGGCCACCTCCTCCT...ATGGAGGGAGCCCCATGGCAAGGAAGGTGGACGGCCTCTAGGAGCCGTGAGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR CAA 90 bp CTAGAGGCCGTCCACCTTCCTTGCCATGGGGCTCCCTCCATTGGGCTTGCTGTCTCCACTCCCAGACCATaGAGACGGCCCTGGTGCCCT +
Preference number: 5 (lower is better)
Translates to: LEAVHLPCHGAPSIGLAVSTPRP*RRPWCP
Trigger: AGGGCACCAGGGCCGTCTCAATGGTCTGGGAGTGGA...GACAGCAAGCCCAATGGAGGGAGCCCCATGGCAAGGAAGGTGGACGGCCTCTAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS GCA 90 bp TTGCCCACGTATGCCACTGCAATCCAGCCTTCCACTGGTGCCTCCTaGTCGGCATCCACGATGTCCATCAGCAGCAGACGACCGCCCAGC +
Preference number: 5 (lower is better)
Translates to: LPTYATAIQPSTGAS*SASTMSISSRRPPS
Trigger: GCTGGGCGGTCGTCTGCTGCTGATGGACATCGTGGATGCCGAGCAGGAGGCACCAGTGGAAGGCTGGATTGCAGTGGCATACGTGGGCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000215798.10
ENST00000382363.8
CDS GCA 90 bp GGCCACTGCCCTTATTCTCCTGGTGGAACTGGGCCGCCTGCTCCTTaGCCACGTATGCCACTGCAATCCAGCCTTCCACTGGTGCCTCCT +
Preference number: 5 (lower is better)
Translates to: GHCPYSPGGTGPPAP*PRMPLQSSLPLVPP
Trigger: AGGAGGCACCAGTGGAAGGCTGGATTGCAGTGGCATACGTGGGCAAGGAGCAGGCGGCCCAGTTCCACCAGGAGAATAAGGGCAGTGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215798.10
ENST00000382363.8
ENST00000431544.2
ENST00000473077.1
CDS GCA 90 bp TCACACCAGCCAGGCCAGGGAAGCCTGCAAGTCCATCTTCCTCCTTaGTGGGGCCAGTCCTCTCTGCCCACAGAGCCACTTCCTTGCTCC +
Preference number: 5 (lower is better)
Translates to: SHQPGQGSLQVHLPP*WGQSSLPTEPLPCS
Trigger: GGAGCAAGGAAGTGGCTCTGTGGGCAGAGAGGACTGGCCCCAGCAAGGAGGAAGATGGACTTGCAGGCTTCCCTGGCCTGGCTGGTGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463319.1
CDS CCA 90 bp CACCAGCCAGGCCAGGGAAGCCTGCAAGTCCATCTTCCTCCTTGCTaGGGCCAGTCCTCTCTGCCCACAGAGCCACTTCCTTGCTCCAAG +
Preference number: 5 (lower is better)
Translates to: HQPGQGSLQVHLPPC*GQSSLPTEPLPCSK
Trigger: CTTGGAGCAAGGAAGTGGCTCTGTGGGCAGAGAGGACTGGCCCCAGCAAGGAGGAAGATGGACTTGCAGGCTTCCCTGGCCTGGCTGGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463319.1
CDS-3UTR CAA 90 bp AGACAGGCCACAGGGAGCTCCCAGAACCCTGGCGACAGCTACACTGGCCCCATATCCCACCCACTGGGCTaGCTGTCCTGTCTATCCTGC +
Preference number: 5 (lower is better)
Translates to: RQATGSSQNPGDSYTGPISHPLG*LSCLSC
Trigger: GCAGGATAGACAGGACAGCAAGCCCAGTGGGTGGGA...TATGGGGCCAGTGTAGCTGTCGCCAGGGTTCTGGGAGCTCCCTGTGGCCTGTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215798.10
ENST00000382363.8
CDS-3UTR CAA 90 bp GGACTGAGGTCCCCATGTCCTCGCTGGCTGGCTGTAAGCCAGGTCCTCTCACGGCTCCCTCCATTGGGCTaGCTGTCCTGTCTATCCTGC +
Preference number: 5 (lower is better)
Translates to: GLRSPCPRWLAVSQVLSRLPPLG*LSCLSC
Trigger: GCAGGATAGACAGGACAGCAAGCCCAATGGAGGGAG...CCGTGAGAGGACCTGGCTTACAGCCAGCCAGCGAGGACATGGGGACCTCAGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332468.5
ENST00000630264.1
CDS-3UTR CAA 90 bp AGGGCCCGGGGCATAGCTGTGCTCTGGGCAATGGGGCCTCACAGGAGTCCTCAGCTCGAGCCCAGGAGTTaGAGACCAGCCTGGACAATA +
Preference number: 5 (lower is better)
Translates to: RARGIAVLWAMGPHRSPQLEPRS*RPAWTI
Trigger: TATTGTCCAGGCTGGTCTCAAACTCCTGGGCTCGAG...CTGAGGACTCCTGTGAGGCCCCATTGCCCAGAGCACAGCTATGCCCCGGGCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR CAA 90 bp ACTGAGGTCCCCATGTCCTCGCTGGCTGGCTGTAAGCCAGGTCCTCTCACGGCTCACTACACAGCTCCTTaGTGCCTCCAGGCCACCTGC +
Preference number: 5 (lower is better)
Translates to: TEVPMSSLAGCKPGPLTAHYTAP*CLQATC
Trigger: GCAGGTGGCCTGGAGGCACAAAGGAGCTGTGTAGTG...AGCCGTGAGAGGACCTGGCTTACAGCCAGCCAGCGAGGACATGGGGACCTCAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR CAA 90 bp GCGGCTGTGGGACTGAGGTCCCCATGTCCTCGCTGGCTGGCTGTAAGCCAGGTCCTCCAGGTGTGGGGGTaGACTCACCTTTACAGAGAG +
Preference number: 5 (lower is better)
Translates to: AAVGLRSPCPRWLAVSQVLQVWG*THLYRE
Trigger: CTCTCTGTAAAGGTGAGTCAACCCCCACACCTGGAG...GACCTGGCTTACAGCCAGCCAGCGAGGACATGGGGACCTCAGTCCCACAGCCGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR CAA 90 bp GAGGCCGTCCACCTTCCTTGCCATGGGGCTCCCTCCATTGGGCTTGCTGTCCTGGCATCCAGGGCAAAGTaGAAGGGAACCAGCCACAGG +
Preference number: 5 (lower is better)
Translates to: EAVHLPCHGAPSIGLAVLASRAK*KGTSHR
Trigger: CCTGTGGCTGGTTCCCTTCAACTTTGCCCTGGATGC...CAGGACAGCAAGCCCAATGGAGGGAGCCCCATGGCAAGGAAGGTGGACGGCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS TCA 90 bp GAAGCTGGGATATGTCCAGCTCTCGGACCACGTTGTGGTTCAGGATaGGAAGAAGCAGGGCAGAGGCACCCAGGAAGAGGGCCCGCCGCA +
Preference number: 5 (lower is better)
Translates to: EAGICPALGPRCGSG*EEAGQRHPGRGPAA
Trigger: TGCGGCGGGCCCTCTTCCTGGGTGCCTCTGCCCTGCTTCTTCTCATCCTGAACCACAACGTGGTCCGAGAGCTGGACATATCCCAGCTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215798.10
ENST00000382363.8
ENST00000431544.2
ENST00000473077.1
CDS TCA 90 bp AGGTCAACTTCCACTCGATATTGGCAGACAGGGACTCTCCGCTGGTaGTCTCAGCCGTGGCCTGGGTCCTCCTGGGAGGGGAAGTCACCG +
Preference number: 5 (lower is better)
Translates to: RSTSTRYWQTGTLRW*SQPWPGSSWEGKSP
Trigger: CGGTGACTTCCCCTCCCAGGAGGACCCAGGCCACGGCTGAGATCACCAGCGGAGAGTCCCTGTCTGCCAATATCGAGTGGAAGTTGACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463319.1
CDS GCA 90 bp CTTATTCTCCTGGTGGAACTGGGCCGCCTGCTCCTTGCCCACGTATaGCACTGCAATCCAGCCTTCCACTGGTGCCTCCTGCTCGGCATC +
Preference number: 5 (lower is better)
Translates to: LILLVELGRLLLAHV*HCNPAFHWCLLLGI
Trigger: GATGCCGAGCAGGAGGCACCAGTGGAAGGCTGGATTGCAGTGGCATACGTGGGCAAGGAGCAGGCGGCCCAGTTCCACCAGGAGAATAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215798.10
ENST00000382363.8
ENST00000431544.2
ENST00000473077.1
CDS-3UTR CAA 90 bp GACAGGCCACAGGGAGCTCCCAGAACCCTGGCGACAGCTACACTGGCCCCATATCCCAGGACGTTGAATTaGCACAGTGGGCAGGTCTGC +
Preference number: 5 (lower is better)
Translates to: DRPQGAPRTLATATLAPYPRTLN*HSGQVC
Trigger: GCAGACCTGCCCACTGTGCAAATTCAACGTCCTGGG...ATATGGGGCCAGTGTAGCTGTCGCCAGGGTTCTGGGAGCTCCCTGTGGCCTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215798.10
ENST00000382363.8
CDS-3UTR CAA 90 bp CCTAGAGGCCGTCCACCTTCCTTGCCATGGGGCTCCCTCCATTGGGCTTGCTGTATGGGGCTCCCTCCATaGGGCTTGCTGTCCTGTCTA +
Preference number: 5 (lower is better)
Translates to: PRGRPPSLPWGSLHWACCMGLPP*GLLSCL
Trigger: TAGACAGGACAGCAAGCCCAATGGAGGGAGCCCCAT...ACAGCAAGCCCAATGGAGGGAGCCCCATGGCAAGGAAGGTGGACGGCCTCTAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332468.5
ENST00000630264.1
CDS-3UTR CAA 90 bp GCGGCTGTGGGACTGAGGTCCCCATGTCCTCGCTGGCTGGCTGTAAGCCAGGTCGGTTCTGGGGAAGAATaGGCTTCCAAGCTCCACTTG +
Preference number: 5 (lower is better)
Translates to: AAVGLRSPCPRWLAVSQVGSGEE*ASKLHL
Trigger: CAAGTGGAGCTTGGAAGCCAATTCTTCCCCAGAACC...GACCTGGCTTACAGCCAGCCAGCGAGGACATGGGGACCTCAGTCCCACAGCCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332468.5
ENST00000421022.1
ENST00000630264.1
ENST00000631046.2
CDS-3UTR CAA 90 bp AGGGCCCGGGGCATAGCTGTGCTCTGGGCAATGGGGCCTCACAGGAGTCCTCAGCTGAAGCATTTTCCCTaGGTGAAGAGGCCGTCAGGT +
Preference number: 5 (lower is better)
Translates to: RARGIAVLWAMGPHRSPQLKHFP*VKRPSG
Trigger: ACCTGACGGCCTCTTCACCAAGGGAAAATGCTTCAG...CTGAGGACTCCTGTGAGGCCCCATTGCCCAGAGCACAGCTATGCCCCGGGCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR CAA 90 bp GTCTCAGGTGGGTCAGCCTCAGCCTCTATCTCCCCACTGTGGTGGCCTTCACACCTGCCGTTCCCAAGCTaGAGCTGGCCGTGTGACCTT +
Preference number: 5 (lower is better)
Translates to: VSGGSASASISPLWWPSHLPFPS*SWPCDL
Trigger: AAGGTCACACGGCCAGCTCAAGCTTGGGAACGGCAG...GTGTGAAGGCCACCACAGTGGGGAGATAGAGGCTGAGGCTGACCCACCTGAGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR CAA 90 bp GAGGCCGTCCACCTTCCTTGCCATGGGGCTCCCTCCATTGGGCTTGCTGTCCTGTGTGTGTCCCCCTTCTaGGTTCTTGGAATGGGTCCC +
Preference number: 5 (lower is better)
Translates to: EAVHLPCHGAPSIGLAVLCVSPF*VLGMGP
Trigger: GGGACCCATTCCAAGAACCAAGAAGGGGGACACACA...CAGGACAGCAAGCCCAATGGAGGGAGCCCCATGGCAAGGAAGGTGGACGGCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR CAA 90 bp AGGGCCCGGGGCATAGCTGTGCTCTGGGCAATGGGGCCTCACAGGAGTCCTCAGGATGACCAAACTGGGTaGCCACCTCCTACCGAGAAA +
Preference number: 5 (lower is better)
Translates to: RARGIAVLWAMGPHRSPQDDQTG*PPPTEK
Trigger: TTTCTCGGTAGGAGGTGGCAACCCAGTTTGGTCATC...CTGAGGACTCCTGTGAGGCCCCATTGCCCAGAGCACAGCTATGCCCCGGGCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR CAA 90 bp GTCCCCATGTCCTCGCTGGCTGGCTGTAAGCCAGGTCCTCTCACGGCTCCTAGAGGAGGCCTGAGGGATTaGCCCTTTCTGAGCCTCATC +
Preference number: 5 (lower is better)
Translates to: VPMSSLAGCKPGPLTAPRGGLRD*PFLSLI
Trigger: GATGAGGCTCAGAAAGGGCAAATCCCTCAGGCCTCC...TCTAGGAGCCGTGAGAGGACCTGGCTTACAGCCAGCCAGCGAGGACATGGGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR CAA 90 bp CTCCCTGCTCTGCCCTATCAATGTGTGTCTGTGGGCAAGCTCTTCCCCTCTCTGGATCAAGCCTGGAGCTaGGGGTGCGGGCCGCAGAGA +
Preference number: 5 (lower is better)
Translates to: LPALPYQCVSVGKLFPSLDQAWS*GCGPQR
Trigger: TCTCTGCGGCCCGCACCCCAAGCTCCAGGCTTGATC...CAGAGAGGGGAAGAGCTTGCCCACAGACACACATTGATAGGGCAGAGCAGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR CAA 90 bp GGGGTGCAGGCAGGAAGGGTCCATCCCCATGTGCAGAGTCCAGCTGGGCAGCTAGAGCCAGAGCTGCGGTaGTATGGTCTGAGGGTATGT +
Preference number: 5 (lower is better)
Translates to: GVQAGRVHPHVQSPAGQLEPELR*YGLRVC
Trigger: ACATACCCTCAGACCATACAACCGCAGCTCTGGCTC...TAGCTGCCCAGCTGGACTCTGCACATGGGGATGGACCCTTCCTGCCTGCACCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR CAA 90 bp GGACTGAGGTCCCCATGTCCTCGCTGGCTGGCTGTAAGCCAGGTCCTCTCACGGTCCAGGACGTTGAATTaGCACAGTGGGCAGGTCTGC +
Preference number: 5 (lower is better)
Translates to: GLRSPCPRWLAVSQVLSRSRTLN*HSGQVC
Trigger: GCAGACCTGCCCACTGTGCAAATTCAACGTCCTGGA...CCGTGAGAGGACCTGGCTTACAGCCAGCCAGCGAGGACATGGGGACCTCAGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421022.1
CDS GCA 90 bp GTAAGCCAGGTCCTCTCACGGCTCCTAGAGGCCGTCCACCTTCCTTaGCATGGGGCTCCCTCCATCCAGGACGTTGAATTTGCACAGTGG +
Preference number: 5 (lower is better)
Translates to: VSQVLSRLLEAVHLP*HGAPSIQDVEFAQW
Trigger: CCACTGTGCAAATTCAACGTCCTGGATGGAGGGAGCCCCATGGCAAGGAAGGTGGACGGCCTCTAGGAGCCGTGAGAGGACCTGGCTTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421022.1
CDS GCA 90 bp TTGCCCACGTATGCCACTGCAATCCAGCCTTCCACTGGTGCCTCCTaGTCGGCATCCACGATGTCCATCTGTGTGGCAAGGGGCCATGAG +
Preference number: 5 (lower is better)
Translates to: LPTYATAIQPSTGAS*SASTMSICVARGHE
Trigger: CTCATGGCCCCTTGCCACACAGATGGACATCGTGGATGCCGAGCAGGAGGCACCAGTGGAAGGCTGGATTGCAGTGGCATACGTGGGCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473077.1
CDS-3UTR CAA 90 bp ATCCTGTGGCTTCGAGTATCCCGGTCAGCAACACAAAGCCGCAGCCAAGGATTCTGGGCCGCCTGCTCCTaGCCCACGTATGCCACTGCA +
Preference number: 5 (lower is better)
Translates to: ILWLRVSRSATQSRSQGFWAACS*PTYATA
Trigger: TGCAGTGGCATACGTGGGCAAGGAGCAGGCGGCCCA...GAATCCTTGGCTGCGGCTTTGTGTTGCTGACCGGGATACTCGAAGCCACAGGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382363.8
CDS-3UTR CAA 90 bp TGGCAGAATTCCGATCCTTGCGGCTGTGGGACTGAGGTCCCCATGTCCTCGCTGCCCAGGACGTTGAATTaGCACAGTGGGCAGGTCTGC +
Preference number: 5 (lower is better)
Translates to: WQNSDPCGCGTEVPMSSLPRTLN*HSGQVC
Trigger: GCAGACCTGCCCACTGTGCAAATTCAACGTCCTGGG...CAGCGAGGACATGGGGACCTCAGTCCCACAGCCGCAAGGATCGGAATTCTGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332468.5
ENST00000630264.1
ENST00000631046.2
CDS-3UTR CAA 90 bp GAAAGGGGCAAACCAAAGGGAGACTCCCACCTCCAAGCCCACCACCAAGGGCGAATGGGGCTCCCTCCATaGGGCTTGCTGTCCTGTCTA +
Preference number: 5 (lower is better)
Translates to: ERGKPKGDSHLQAHHQGRMGLPP*GLLSCL
Trigger: TAGACAGGACAGCAAGCCCAATGGAGGGAGCCCCAT...TCGCCCTTGGTGGTGGGCTTGGAGGTGGGAGTCTCCCTTTGGTTTGCCCCTTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR CAA 90 bp GAGGTCCCCATGTCCTCGCTGGCTGGCTGTAAGCCAGGTCCTCTCACGGCTCCTGGTTCTGGGGAAGAATaGGCTTCCAAGCTCCACTTG +
Preference number: 5 (lower is better)
Translates to: EVPMSSLAGCKPGPLTAPGSGEE*ASKLHL
Trigger: CAAGTGGAGCTTGGAAGCCAATTCTTCCCCAGAACC...AGGAGCCGTGAGAGGACCTGGCTTACAGCCAGCCAGCGAGGACATGGGGACCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332468.5
ENST00000630264.1
ENST00000631046.2
CDS-3UTR CAA 90 bp GGACTGAGGTCCCCATGTCCTCGCTGGCTGGCTGTAAGCCAGGTCCTCTCACGGGCCTTGCTAAGTCTTTaGAGAGCTCTAGGTCCCACC +
Preference number: 5 (lower is better)
Translates to: GLRSPCPRWLAVSQVLSRALLSL*RALGPT
Trigger: GGTGGGACCTAGAGCTCTCAAAAGACTTAGCAAGGC...CCGTGAGAGGACCTGGCTTACAGCCAGCCAGCGAGGACATGGGGACCTCAGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR CAA 90 bp CCTGCAGGCCTGTCCCATGTCTTTTCTTGGGTAGGGACGGTGCCCCAGGGCGCTGGGGGATCATCTATATaGGGCATCTGCTCCCTGAGA +
Preference number: 5 (lower is better)
Translates to: PAGLSHVFSWVGTVPQGAGGSSI*GICSLR
Trigger: TCTCAGGGAGCAGATGCCCAATATAGATGATCCCCC...AGCGCCCTGGGGCACCGTCCCTACCCAAGAAAAGACATGGGACAGGCCTGCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR CAA 90 bp TGGCAGAATTCCGATCCTTGCGGCTGTGGGACTGAGGTCCCCATGTCCTCGCTGCGGTTCCCCAGGACGTaGAATTTGCACAGTGGGCAG +
Preference number: 5 (lower is better)
Translates to: WQNSDPCGCGTEVPMSSLRFPRT*NLHSGQ
Trigger: CTGCCCACTGTGCAAATTCAACGTCCTGGGGAACCG...CAGCGAGGACATGGGGACCTCAGTCCCACAGCCGCAAGGATCGGAATTCTGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000630264.1
ENST00000631046.2
CDS-3UTR CAA 90 bp GGCAGACTCACGTCACAGGATTGCAGAGAAGGTCCCAAAGTGACCTCTCTTCCTTGGGCCGCCTGCTCCTaGCCCACGTATGCCACTGCA +
Preference number: 5 (lower is better)
Translates to: GRLTSQDCREGPKVTSLPWAACS*PTYATA
Trigger: TGCAGTGGCATACGTGGGCAAGGAGCAGGCGGCCCA...AGGAAGAGAGGTCACTTTGGGACCTTCTCTGCAATCCTGTGACGTGAGTCTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000215798.10
ENST00000382363.8
CDS-3UTR CAA 90 bp GACAGGCCACAGGGAGCTCCCAGAACCCTGGCGACAGCTACACTGGCCCCATATAACTTCCACTCGATATaGGCAGACAGGGACTCTCCG +
Preference number: 5 (lower is better)
Translates to: DRPQGAPRTLATATLAPYNFHSI*ADRDSP
Trigger: CGGAGAGTCCCTGTCTGCCAATATCGAGTGGAAGTT...ATATGGGGCCAGTGTAGCTGTCGCCAGGGTTCTGGGAGCTCCCTGTGGCCTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215798.10
ENST00000382363.8
CDS-3UTR CAA 90 bp ACTGAGGTCCCCATGTCCTCGCTGGCTGGCTGTAAGCCAGGTCCTCTCACGGCTGGTTCTGGGGAAGAATaGGCTTCCAAGCTCCACTTG +
Preference number: 5 (lower is better)
Translates to: TEVPMSSLAGCKPGPLTAGSGEE*ASKLHL
Trigger: CAAGTGGAGCTTGGAAGCCAATTCTTCCCCAGAACC...AGCCGTGAGAGGACCTGGCTTACAGCCAGCCAGCGAGGACATGGGGACCTCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332468.5
ENST00000421022.1
ENST00000630264.1
ENST00000631046.2
CDS-3UTR CAA 90 bp TGTTGGCAGAATTCCGATCCTTGCGGCTGTGGGACTGAGGTCCCCATGTCCTCGGGAGTAGGTGACCTGTaGCCTAGTGAAAGGGGCAGG +
Preference number: 5 (lower is better)
Translates to: CWQNSDPCGCGTEVPMSSGVGDL*PSERGR
Trigger: CCTGCCCCTTTCACTAGGCAACAGGTCACCTACTCC...CGAGGACATGGGGACCTCAGTCCCACAGCCGCAAGGATCGGAATTCTGCCAACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR CAA 90 bp TGCGGCTGTGGGACTGAGGTCCCCATGTCCTCGCTGGCTGGCTGTAAGCCAGGTAGCTGTATGAGCTACTaGGAGAACCTTGGCTCAGAG +
Preference number: 5 (lower is better)
Translates to: CGCGTEVPMSSLAGCKPGSCMSY*ENLGSE
Trigger: CTCTGAGCCAAGGTTCTCCAAGTAGCTCATACAGCT...ACCTGGCTTACAGCCAGCCAGCGAGGACATGGGGACCTCAGTCCCACAGCCGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR CAA 90 bp CTAGAGGCCGTCCACCTTCCTTGCCATGGGGCTCCCTCCATTGGGCTTGCTGTCAGAGACCTAGCTGTCTaGACACAGGTCTCCACTGTC +
Preference number: 5 (lower is better)
Translates to: LEAVHLPCHGAPSIGLAVRDLAV*TQVSTV
Trigger: GACAGTGGAGACCTGTGTCAAGACAGCTAGGTCTCT...GACAGCAAGCCCAATGGAGGGAGCCCCATGGCAAGGAAGGTGGACGGCCTCTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR CAA 90 bp CACAACAGCCAAACGCAGACACAGGTCTGGTTGTCCCCACAGCCTGTGCTCTTCCCCAGGACGTTGAATTaGCACAGTGGGCAGGTCTGC +
Preference number: 5 (lower is better)
Translates to: HNSQTQTQVWLSPQPVLFPRTLN*HSGQVC
Trigger: GCAGACCTGCCCACTGTGCAAATTCAACGTCCTGGG...GAAGAGCACAGGCTGTGGGGACAACCAGACCTGTGTCTGCGTTTGGCTGTTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR CAA 90 bp ATGGGGCTCCCTCCATTGGGCTTGCTGTCCTGTCTATCCTGCTGTCCCATCCTGTGCTCACCCAGGACGTaGAATTTGCACAGTGGGCAG +
Preference number: 5 (lower is better)
Translates to: MGLPPLGLLSCLSCCPILCSPRT*NLHSGQ
Trigger: CTGCCCACTGTGCAAATTCAACGTCCTGGGTGAGCA...CAGGATGGGACAGCAGGATAGACAGGACAGCAAGCCCAATGGAGGGAGCCCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR CAA 90 bp CTGGCCACTGTAGTCTCAGCCCCCAGGAATTCCCAGACAGGCCACAGGGAGCTCACTCACGTCACAGGATaGCAGAGAAGGTCCCAAAGT +
Preference number: 5 (lower is better)
Translates to: LATVVSAPRNSQTGHRELTHVTG*QRRSQS
Trigger: ACTTTGGGACCTTCTCTGCAATCCTGTGACGTGAGT...GAGCTCCCTGTGGCCTGTCTGGGAATTCCTGGGGGCTGAGACTACAGTGGCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000215798.10
ENST00000382363.8
CDS-3UTR CAA 90 bp TCACAACAGCCAAACGCAGACACAGGTCTGGTTGTCCCCACAGCCTGTGCTCTTCTGCCGTTCCCAAGCTaGAGCTGGCCGTGTGACCTT +
Preference number: 5 (lower is better)
Translates to: SQQPNADTGLVVPTACALLPFPS*SWPCDL
Trigger: AAGGTCACACGGCCAGCTCAAGCTTGGGAACGGCAG...AAGAGCACAGGCTGTGGGGACAACCAGACCTGTGTCTGCGTTTGGCTGTTGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332468.5
ENST00000619645.1
CDS-3UTR CAA 90 bp ATCATCCAGGCCCTTCTGTCCCCTTCTCAACCACCTTGTGAGGCAGGTCATAGCCAGACACAGGTCTGGTaGTCCCCACAGCCTGTGCTC +
Preference number: 5 (lower is better)
Translates to: IIQALLSPSQPPCEAGHSQTQVW*SPQPVL
Trigger: GAGCACAGGCTGTGGGGACAACCAGACCTGTGTCTG...GCTATGACCTGCCTCACAAGGTGGTTGAGAAGGGGACAGAAGGGCCTGGATGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR CAA 90 bp TCACAACAGCCAAACGCAGACACAGGTCTGGTTGTCCCCACAGCCTGTGCTCTTCAGACACAGGTCTGGTaGTCCCCACAGCCTGTGCTC +
Preference number: 5 (lower is better)
Translates to: SQQPNADTGLVVPTACALQTQVW*SPQPVL
Trigger: GAGCACAGGCTGTGGGGACAACCAGACCTGTGTCTG...AAGAGCACAGGCTGTGGGGACAACCAGACCTGTGTCTGCGTTTGGCTGTTGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332468.5
ENST00000619645.1
CDS-3UTR CAA 90 bp CACAACAGCCAAACGCAGACACAGGTCTGGTTGTCCCCACAGCCTGTGCTCTTCGCTGTTCTCTGTGCCTaGCAAACTGTCACAGCCGCC +
Preference number: 5 (lower is better)
Translates to: HNSQTQTQVWLSPQPVLFAVLCA*QTVTAA
Trigger: GGCGGCTGTGACAGTTTGCAAGGCACAGAGAACAGC...GAAGAGCACAGGCTGTGGGGACAACCAGACCTGTGTCTGCGTTTGGCTGTTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR CAA 90 bp CTAGAGGCCGTCCACCTTCCTTGCCATGGGGCTCCCTCCATTGGGCTTGCTGTCTTGCACTGTCAGTCATaGAGGGCTACTTCCAGAGAG +
Preference number: 5 (lower is better)
Translates to: LEAVHLPCHGAPSIGLAVLHCQS*RATSRE
Trigger: CTCTCTGGAAGTAGCCCTCAATGACTGACAGTGCAA...GACAGCAAGCCCAATGGAGGGAGCCCCATGGCAAGGAAGGTGGACGGCCTCTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR CAA 90 bp GCTCTCTCAGGCGCCCACCAACTCCGTGCCATGTATTCATTAGCTCCCAGTTCTCCCAGGACGTTGAATTaGCACAGTGGGCAGGTCTGC +
Preference number: 5 (lower is better)
Translates to: ALSGAHQLRAMYSLAPSSPRTLN*HSGQVC
Trigger: GCAGACCTGCCCACTGTGCAAATTCAACGTCCTGGG...AGAACTGGGAGCTAATGAATACATGGCACGGAGTTGGTGGGCGCCTGAGAGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332468.5
ENST00000630264.1
ENST00000631046.2
CDS-3UTR CAA 90 bp CTGGGAGCTGCCTGTAAGGAGGGCAGACTCACGTCACAGGATTGCAGAGAAGGTTGCTCACCCAGGACGTaGAATTTGCACAGTGGGCAG +
Preference number: 5 (lower is better)
Translates to: LGAACKEGRLTSQDCREGCSPRT*NLHSGQ
Trigger: CTGCCCACTGTGCAAATTCAACGTCCTGGGTGAGCA...ACCTTCTCTGCAATCCTGTGACGTGAGTCTGCCCTCCTTACAGGCAGCTCCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215798.10
CDS-3UTR CAA 90 bp GCTCTCTCAGGCGCCCACCAACTCCGTGCCATGTATTCATTAGCTCCCAGTTCTCTCCCTCCATTGGGCTaGCTGTCCTGTCTATCCTGC +
Preference number: 5 (lower is better)
Translates to: ALSGAHQLRAMYSLAPSSLPPLG*LSCLSC
Trigger: GCAGGATAGACAGGACAGCAAGCCCAATGGAGGGAG...AGAACTGGGAGCTAATGAATACATGGCACGGAGTTGGTGGGCGCCTGAGAGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332468.5
ENST00000630264.1
CDS-3UTR CAA 90 bp GTCTCAGGTGGGTCAGCCTCAGCCTCTATCTCCCCACTGTGGTGGCCTTCACACACAATCTCCAAAAACTaGCTGAGGCCTTCTCAGGGC +
Preference number: 5 (lower is better)
Translates to: VSGGSASASISPLWWPSHTISKN*LRPSQG
Trigger: GCCCTGAGAAGGCCTCAGCAAGTTTTTGGAGATTGT...GTGTGAAGGCCACCACAGTGGGGAGATAGAGGCTGAGGCTGACCCACCTGAGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR CAA 90 bp TGGCAGAATTCCGATCCTTGCGGCTGTGGGACTGAGGTCCCCATGTCCTCGCTGCTTGGACAGCTCACTTaGGCTGTAGCCTGTCCAAAA +
Preference number: 5 (lower is better)
Translates to: WQNSDPCGCGTEVPMSSLLGQLT*AVACPK
Trigger: TTTTGGACAGGCTACAGCCAAAGTGAGCTGTCCAAG...CAGCGAGGACATGGGGACCTCAGTCCCACAGCCGCAAGGATCGGAATTCTGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR CAA 90 bp GTCACAACAGCCAAACGCAGACACAGGTCTGGTTGTCCCCACAGCCTGTGCTCTCCCCCTTCTTGGTTCTaGGAATGGGTCCCCAAACCA +
Preference number: 5 (lower is better)
Translates to: VTTAKRRHRSGCPHSLCSPPSWF*EWVPKP
Trigger: TGGTTTGGGGACCCATTCCAAGAACCAAGAAGGGGG...AGAGCACAGGCTGTGGGGACAACCAGACCTGTGTCTGCGTTTGGCTGTTGTGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000332468.5
ENST00000619645.1
CDS-3UTR CAA 90 bp GTCACAACAGCCAAACGCAGACACAGGTCTGGTTGTCCCCACAGCCTGTGCTCTTGTGTGTCCCCCTTCTaGGTTCTTGGAATGGGTCCC +
Preference number: 5 (lower is better)
Translates to: VTTAKRRHRSGCPHSLCSCVSPF*VLGMGP
Trigger: GGGACCCATTCCAAGAACCAAGAAGGGGGACACACA...AGAGCACAGGCTGTGGGGACAACCAGACCTGTGTCTGCGTTTGGCTGTTGTGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000332468.5
ENST00000619645.1
CDS-3UTR CAA 90 bp CCTTCCTTGCCATGGGGCTCCCTCCATTGGGCTTGCTGTCCTGTCTATCCTGCTGTGAGGTTAAGGAAGTaGCCCAAGGCCACACAGCTA +
Preference number: 5 (lower is better)
Translates to: PSLPWGSLHWACCPVYPAVRLRK*PKATQL
Trigger: TAGCTGTGTGGCCTTGGGCAACTTCCTTAACCTCAC...AGCAGGATAGACAGGACAGCAAGCCCAATGGAGGGAGCCCCATGGCAAGGAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR CAA 90 bp ATCCTGTGGCTTCGAGTATCCCGGTCAGCAACACAAAGCCGCAGCCAAGGATTCCGGTTCCCCAGGACGTaGAATTTGCACAGTGGGCAG +
Preference number: 5 (lower is better)
Translates to: ILWLRVSRSATQSRSQGFRFPRT*NLHSGQ
Trigger: CTGCCCACTGTGCAAATTCAACGTCCTGGGGAACCG...GAATCCTTGGCTGCGGCTTTGTGTTGCTGACCGGGATACTCGAAGCCACAGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382363.8
CDS-3UTR CAA 90 bp GCTCTCTCAGGCGCCCACCAACTCCGTGCCATGTATTCATTAGCTCCCAGTTCTCGGTTCCCCAGGACGTaGAATTTGCACAGTGGGCAG +
Preference number: 5 (lower is better)
Translates to: ALSGAHQLRAMYSLAPSSRFPRT*NLHSGQ
Trigger: CTGCCCACTGTGCAAATTCAACGTCCTGGGGAACCG...AGAACTGGGAGCTAATGAATACATGGCACGGAGTTGGTGGGCGCCTGAGAGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000630264.1
ENST00000631046.2
CDS GCA 90 bp TTGCCCACGTATGCCACTGCAATCCAGCCTTCCACTGGTGCCTCCTaGTCGGCATCCACGATGTCCATCTGTAATTCCAGCTACTCAGGA +
Preference number: 5 (lower is better)
Translates to: LPTYATAIQPSTGAS*SASTMSICNSSYSG
Trigger: TCCTGAGTAGCTGGAATTACAGATGGACATCGTGGATGCCGAGCAGGAGGCACCAGTGGAAGGCTGGATTGCAGTGGCATACGTGGGCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431544.2
CDS CCA 90 bp CCAAGTCCTGCCATCCTCCATAGCCATCCTTGGAGAGGCCACAGGTaGTCCACAAGGTCAACTTCCACTCGATATTGGCAGACAGGGACT +
Preference number: 5 (lower is better)
Translates to: PSPAILHSHPWRGHR*STRSTSTRYWQTGT
Trigger: AGTCCCTGTCTGCCAATATCGAGTGGAAGTTGACCTTGTGGACCACCTGTGGCCTCTCCAAGGATGGCTATGGAGGATGGCAGGACTTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215798.10
ENST00000382363.8
ENST00000463319.1
ENST00000473077.1
CDS CCA 90 bp TGCCTCCAAGGCAGACCAAGTCCTGCCATCCTCCATAGCCATCCTTaGAGAGGCCACAGGTGGTCCACAAGGTCAACTTCCACTCGATAT +
Preference number: 5 (lower is better)
Translates to: CLQGRPSPAILHSHP*RGHRWSTRSTSTRY
Trigger: ATATCGAGTGGAAGTTGACCTTGTGGACCACCTGTGGCCTCTCCAAGGATGGCTATGGAGGATGGCAGGACTTGGTCTGCCTTGGAGGCA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000215798.10
ENST00000382363.8
ENST00000463319.1
CDS-3UTR CAA 90 bp TCCAGAACAGGACGGTTTCTAAGACCTCTGGTCCTAGCCAGGCCCAGGAAGGGAAGCTCTCGGACCACGTaGTGGTTCAGGATGAGAAGA +
Preference number: 5 (lower is better)
Translates to: SRTGRFLRPLVLARPRKGSSRTT*WFRMRR
Trigger: TCTTCTCATCCTGAACCACAACGTGGTCCGAGAGCT...TCCCTTCCTGGGCCTGGCTAGGACCAGAGGTCTTAGAAACCGTCCTGTTCTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000215798.10
ENST00000382363.8
CDS-3UTR CAA 90 bp GAGCTCCCAGAACCCTGGCGACAGCTACACTGGCCCCATATTCTCTTTCCTTATCCCAGGACGTTGAATTaGCACAGTGGGCAGGTCTGC +
Preference number: 5 (lower is better)
Translates to: ELPEPWRQLHWPHILFPYPRTLN*HSGQVC
Trigger: GCAGACCTGCCCACTGTGCAAATTCAACGTCCTGGG...ATAAGGAAAGAGAATATGGGGCCAGTGTAGCTGTCGCCAGGGTTCTGGGAGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215798.10
ENST00000382363.8
CDS-3UTR CAA 90 bp CTCAGGCGCCCACCAACTCCGTGCCATGTATTCATTAGCTCCCAGTTCTGGCAGGGTTCTGGGGAAGAATaGGCTTCCAAGCTCCACTTG +
Preference number: 5 (lower is better)
Translates to: LRRPPTPCHVFISSQFWQGSGEE*ASKLHL
Trigger: CAAGTGGAGCTTGGAAGCCAATTCTTCCCCAGAACC...CTGCCAGAACTGGGAGCTAATGAATACATGGCACGGAGTTGGTGGGCGCCTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332468.5
ENST00000630264.1
ENST00000631046.2
CDS-3UTR CAA 90 bp ACTGAGGTCCCCATGTCCTCGCTGGCTGGCTGTAAGCCAGGTCCTCTCACGGCTCATCCCTGTGGGACTTaGGAAAAATCTTGCCTACTT +
Preference number: 5 (lower is better)
Translates to: TEVPMSSLAGCKPGPLTAHPCGT*EKSCLL
Trigger: AAGTAGGCAAGATTTTTCCAAAGTCCCACAGGGATG...AGCCGTGAGAGGACCTGGCTTACAGCCAGCCAGCGAGGACATGGGGACCTCAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR CAA 90 bp GCTCTCTCAGGCGCCCACCAACTCCGTGCCATGTATTCATTAGCTCCCAGTTCTTTAAGAACGCAGGCCTaGGGGATCATGCCTTGCTCC +
Preference number: 5 (lower is better)
Translates to: ALSGAHQLRAMYSLAPSSLRTQA*GIMPCS
Trigger: GGAGCAAGGCATGATCCCCAAGGCCTGCGTTCTTAA...AGAACTGGGAGCTAATGAATACATGGCACGGAGTTGGTGGGCGCCTGAGAGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR CAA 90 bp GGGGTGCAGGCAGGAAGGGTCCATCCCCATGTGCAGAGTCCAGCTGGGCAGCTAACTGTAGTTTTAAACTaGGAGGTTAGGACAGAGACC +
Preference number: 5 (lower is better)
Translates to: GVQAGRVHPHVQSPAGQLTVVLN*EVRTET
Trigger: GGTCTCTGTCCTAACCTCCAAGTTTAAAACTACAGT...TAGCTGCCCAGCTGGACTCTGCACATGGGGATGGACCCTTCCTGCCTGCACCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR CAA 90 bp AAGATGGCCACCCTGGAGAGAGAACTGAAACAGCAGCGGGAGTCCACACAGGCTCTAGGGCAAATCCTTTaGCAGAGCTGGCAGGAAGAT +
Preference number: 5 (lower is better)
Translates to: KMATLERELKQQRESTQALGQIL*QSWQED
Trigger: ATCTTCCTGCCAGCTCTGCAAAAGGATTTGCCCTAG...AGCCTGTGTGGACTCCCGCTGCTGTTTCAGTTCTCTCTCCAGGGTGGCCATCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR CAA 90 bp CACAACAGCCAAACGCAGACACAGGTCTGGTTGTCCCCACAGCCTGTGCTCTTCCTAGGGCAAATCCTTTaGCAGAGCTGGCAGGAAGAT +
Preference number: 5 (lower is better)
Translates to: HNSQTQTQVWLSPQPVLFLGQIL*QSWQED
Trigger: ATCTTCCTGCCAGCTCTGCAAAAGGATTTGCCCTAG...GAAGAGCACAGGCTGTGGGGACAACCAGACCTGTGTCTGCGTTTGGCTGTTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332468.5
ENST00000619645.1
CDS-3UTR CAA 90 bp GTATTCATTAGCTCCCAGTTCTGGCAGTCAGAAGTCCAGGTTCTGTGTGGCTGGGTCCCATGTCTTTTCTaGGGTAGGGACGGTGCCCCA +
Preference number: 5 (lower is better)
Translates to: VFISSQFWQSEVQVLCGWVPCLF*GRDGAP
Trigger: TGGGGCACCGTCCCTACCCAAGAAAAGACATGGGAC...CCAGCCACACAGAACCTGGACTTCTGACTGCCAGAACTGGGAGCTAATGAATAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR CAA 90 bp GCTCTCTCAGGCGCCCACCAACTCCGTGCCATGTATTCATTAGCTCCCAGTTCTGAGCAGCCTCTCTGGTaGTGGCAAAAGCCATTAGAG +
Preference number: 5 (lower is better)
Translates to: ALSGAHQLRAMYSLAPSSEQPLW*WQKPLE
Trigger: CTCTAATGGCTTTTGCCACAACCAGAGAGGCTGCTC...AGAACTGGGAGCTAATGAATACATGGCACGGAGTTGGTGGGCGCCTGAGAGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR CAA 90 bp TATTCATTAGCTCCCAGTTCTGGCAGTCAGAAGTCCAGGTTCTGTGTGGCTGGGCTTGGGGATCATGCCTaGCTCCCTGGCTCTGACATC +
Preference number: 5 (lower is better)
Translates to: YSLAPSSGSQKSRFCVAGLGDHA*LPGSDI
Trigger: GATGTCAGAGCCAGGGAGCAAGGCATGATCCCCAAG...CCCAGCCACACAGAACCTGGACTTCTGACTGCCAGAACTGGGAGCTAATGAATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR CAA 90 bp TCATTAGCTCCCAGTTCTGGCAGTCAGAAGTCCAGGTTCTGTGTGGCTGGGTTTAGACTCTCCAAGCTCTaGATGCCTGGGCCAGTTCCC +
Preference number: 5 (lower is better)
Translates to: SLAPSSGSQKSRFCVAGFRLSKL*MPGPVP
Trigger: GGGAACTGGCCCAGGCATCAAGAGCTTGGAGAGTCT...AAACCCAGCCACACAGAACCTGGACTTCTGACTGCCAGAACTGGGAGCTAATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR CAA 90 bp TTCATTAGCTCCCAGTTCTGGCAGTCAGAAGTCCAGGTTCTGTGTGGCTGGGTTCCCCCTTCTTGGTTCTaGGAATGGGTCCCCAAACCA +
Preference number: 5 (lower is better)
Translates to: FISSQFWQSEVQVLCGWVPPSWF*EWVPKP
Trigger: TGGTTTGGGGACCCATTCCAAGAACCAAGAAGGGGG...AACCCAGCCACACAGAACCTGGACTTCTGACTGCCAGAACTGGGAGCTAATGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS-3UTR CAA 90 bp CCTTCCTTGCCATGGGGCTCCCTCCATTGGGCTTGCTGTCCTGTCTATCCTGCTCTCACCTGCTTTCCCTaGTCTTTTTCTGAACACAGA +
Preference number: 5 (lower is better)
Translates to: PSLPWGSLHWACCPVYPALTCFP*SFSEHR
Trigger: TCTGTGTTCAGAAAAAGACAAGGGAAAGCAGGTGAG...AGCAGGATAGACAGGACAGCAAGCCCAATGGAGGGAGCCCCATGGCAAGGAAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS CCA 90 bp ATCCAACAGCTTGGTGACATTGGAGGAATAATGGAGGACGATCACTaGCCTGAGCAGAAGCTGGGATATGTCCAGCTCTCGGACCACGTT +
Preference number: 5 (lower is better)
Translates to: IQQLGDIGGIMEDDH*PEQKLGYVQLSDHV
Trigger: AACGTGGTCCGAGAGCTGGACATATCCCAGCTTCTGCTCAGGCCAGTGATCGTCCTCCATTATTCCTCCAATGTCACCAAGCTGTTGGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215798.10
ENST00000382363.8
ENST00000431544.2
ENST00000473077.1
CDS-3UTR CAA 90 bp TCCCAGAACCCTGGCGACAGCTACACTGGCCCCATATTCTCTTTCCTTATTGACAGCTCTCGGACCACGTaGTGGTTCAGGATGAGAAGA +
Preference number: 5 (lower is better)
Translates to: SQNPGDSYTGPIFSFLIDSSRTT*WFRMRR
Trigger: TCTTCTCATCCTGAACCACAACGTGGTCCGAGAGCT...GTCAATAAGGAAAGAGAATATGGGGCCAGTGTAGCTGTCGCCAGGGTTCTGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215798.10
ENST00000382363.8
CDS-3UTR CAA 90 bp TCCAGAACAGGACGGTTTCTAAGACCTCTGGTCCTAGCCAGGCCCAGGAAGGGAAACAGGCAGACAGCCTaGACAAGAAGTATCCTGAAA +
Preference number: 5 (lower is better)
Translates to: SRTGRFLRPLVLARPRKGNRQTA*TRSILK
Trigger: TTTCAGGATACTTCTTGTCAAGGCTGTCTGCCTGTT...TCCCTTCCTGGGCCTGGCTAGGACCAGAGGTCTTAGAAACCGTCCTGTTCTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000215798.10
ENST00000382363.8
CDS-3UTR CAA 90 bp CAGACTCACGTCACAGGATTGCAGAGAAGGTCCCAAAGTGACCTCTCTTCCTTGACTCACGTCACAGGATaGCAGAGAAGGTCCCAAAGT +
Preference number: 5 (lower is better)
Translates to: QTHVTGLQRRSQSDLSSLTHVTG*QRRSQS
Trigger: ACTTTGGGACCTTCTCTGCAATCCTGTGACGTGAGT...CAAGGAAGAGAGGTCACTTTGGGACCTTCTCTGCAATCCTGTGACGTGAGTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000215798.10
ENST00000382363.8
CDS GCA 90 bp TTGAAGAGGGCCAGGTTTTCCAGGGTCCAAGTCAGGCAGAACAAATaGAGCAATGTGGAACAGACGGAAACTCCAGCTCTGTCATTTCCT +
Preference number: 5 (lower is better)
Translates to: LKRARFSRVQVRQNK*SNVEQTETPALSFP
Trigger: AGGAAATGACAGAGCTGGAGTTTCCGTCTGTTCCACATTGCTGCATTTGTTCTGCCTGACTTGGACCCTGGAAAACCTGGCCCTCTTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431544.2
CDS-3UTR CAA 90 bp CAGACTCACGTCACAGGATTGCAGAGAAGGTCCCAAAGTGACCTCTCTTCCTTGAACAGGCAGACAGCCTaGACAAGAAGTATCCTGAAA +
Preference number: 5 (lower is better)
Translates to: QTHVTGLQRRSQSDLSSLNRQTA*TRSILK
Trigger: TTTCAGGATACTTCTTGTCAAGGCTGTCTGCCTGTT...CAAGGAAGAGAGGTCACTTTGGGACCTTCTCTGCAATCCTGTGACGTGAGTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000215798.10
ENST00000382363.8
CDS-3UTR CAA 90 bp GATGACCAAACTGGGTTGCCACCTCCTACCGAGAAAGCGCCTTCTATTTTCCAAAAAATCTTGCCTACTTaGAACCGCAGTTTCTTCATC +
Preference number: 5 (lower is better)
Translates to: DDQTGLPPPTEKAPSIFQKILPT*NRSFFI
Trigger: GATGAAGAAACTGCGGTTCAAAGTAGGCAAGATTTT...TTGGAAAATAGAAGGCGCTTTCTCGGTAGGAGGTGGCAACCCAGTTTGGTCATC
46% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000332468.5
CDS TCA 72 bp CCAGCAGGGGCGCCGGGTCGGCTTCGGAGCCGATCCTaGCGCCCTCCAGGACCAGAGCGTCCTGGCGCGGCA +
Preference number: 6 (lower is better)
Translates to: PAGAPGRLRSRS*RPPGPERPGAA
Trigger: TGCCGCGCCAGGACGCTCTGGTCCTGGAGGGCGTCAGGATCGGCTCCGAAGCCGACCCGGCGCCCCTGCTGG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215798.10
ENST00000382363.8
CDS CCA 72 bp TCCCGCTGGCTCTGCCGCGACGCCTGCCGCTGGGCCTaGACCACGAGGCCTGTGCACAGGAGCATGGCCACC +
Preference number: 6 (lower is better)
Translates to: SRWLCRDACRWA*TTRPVHRSMAT
Trigger: GGTGGCCATGCTCCTGTGCACAGGCCTCGTGGTCCAGGCCCAGCGGCAGGCGTCGCGGCAGAGCCAGCGGGA
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000215798.10
ENST00000382363.8
ENST00000463319.1
CDS CCA 72 bp CGCTTAAACAGGTCCACCTGGCCTCCGAGCTCCCGCTaGCTCTGCCGCGACGCCTGCCGCTGGGCCTGGACC +
Preference number: 6 (lower is better)
Translates to: RLNRSTWPPSSR*LCRDACRWAWT
Trigger: GGTCCAGGCCCAGCGGCAGGCGTCGCGGCAGAGCCAGCGGGAGCTCGGAGGCCAGGTGGACCTGTTTAAGCG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000215798.10
ENST00000382363.8
ENST00000463319.1
CDS GCA 72 bp ACAGGTCTCAGCACCCGGATCTGGGAGGCCCTGCGCTaGCCTGCTCAGCCGGCAGCGCCGTGTCTTGAGGGA +
Preference number: 6 (lower is better)
Translates to: TGLSTRIWEALR*PAQPAAPCLEG
Trigger: TCCCTCAAGACACGGCGCTGCCGGCTGAGCAGGGCAGCGCAGGGCCTCCCAGATCCGGGTGCTGAGACCTGT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000215798.10
ENST00000382363.8
ENST00000463319.1
CDS GCA 72 bp TGCCCTGCTCAGCCGGCAGCGCCGTGTCTTGAGGGATaGCAGTCTCCGCACCACGCGGCGCTTAAACAGGTC +
Preference number: 6 (lower is better)
Translates to: CPAQPAAPCLEG*QSPHHAALKQV
Trigger: GACCTGTTTAAGCGCCGCGTGGTGCGGAGACTGGCATCCCTCAAGACACGGCGCTGCCGGCTGAGCAGGGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000215798.10
ENST00000382363.8
ENST00000463319.1
CDS CCA 72 bp GGAAGAGGGCCCGCCGCATCTGCTGGACCAGGGCCTTaGGATAGGCCTGCGGGCCACTGCCCTTATTCTCCT +
Preference number: 6 (lower is better)
Translates to: GRGPAASAGPGP*DRPAGHCPYSP
Trigger: AGGAGAATAAGGGCAGTGGCCCGCAGGCCTATCCCAAGGCCCTGGTCCAGCAGATGCGGCGGGCCCTCTTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215798.10
ENST00000382363.8
ENST00000431544.2
ENST00000473077.1
CDS CCA 72 bp GCCTGCGGGCCACTGCCCTTATTCTCCTGGTGGAACTaGGCCGCCTGCTCCTTGCCCACGTATGCCACTGCA +
Preference number: 6 (lower is better)
Translates to: ACGPLPLFSWWN*AACSLPTYATA
Trigger: TGCAGTGGCATACGTGGGCAAGGAGCAGGCGGCCCAGTTCCACCAGGAGAATAAGGGCAGTGGCCCGCAGGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215798.10
ENST00000382363.8
ENST00000431544.2
ENST00000473077.1
CDS GCA 72 bp CTGGTGGAACTGGGCCGCCTGCTCCTTGCCCACGTATaGCACTGCAATCCAGCCTTCCACTGGTGCCTCCTG +
Preference number: 6 (lower is better)
Translates to: LVELGRLLLAHV*HCNPAFHWCLL
Trigger: CAGGAGGCACCAGTGGAAGGCTGGATTGCAGTGGCATACGTGGGCAAGGAGCAGGCGGCCCAGTTCCACCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215798.10
ENST00000382363.8
ENST00000431544.2
ENST00000473077.1
CDS CCA 72 bp CGAGGCCTGTGCACAGGAGCATGGCCACCAGCAGGATaGCGTTCCACAGCTGCTGCAGGGGTTTCTGCTCCT +
Preference number: 6 (lower is better)
Translates to: RGLCTGAWPPAG*RSTAAAGVSAP
Trigger: AGGAGCAGAAACCCCTGCAGCAGCTGTGGAACGCCATCCTGCTGGTGGCCATGCTCCTGTGCACAGGCCTCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000215798.10
ENST00000382363.8
ENST00000463319.1
CDS CCA 72 bp AGGGTGTGGTGGGGGAGGGAGCCGGGGTCATCACAGTaGATGCCAAGGCCAGAGTTCCCAGAGCATCTGGCT +
Preference number: 6 (lower is better)
Translates to: RVWWGREPGSSQ*MPRPEFPEHLA
Trigger: AGCCAGATGCTCTGGGAACTCTGGCCTTGGCATCCACTGTGATGACCCCGGCTCCCTCCCCCACCACACCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000473077.1
CDS CAA 72 bp GCCGAGGGACCCCACCCCTGGTGCTCACCCAGGACGTaGAATTTGCACAGTGGGCAGGTCTGCTGGAGCATC +
Preference number: 6 (lower is better)
Translates to: AEGPHPWCSPRT*NLHSGQVCWSI
Trigger: GATGCTCCAGCAGACCTGCCCACTGTGCAAATTCAACGTCCTGGGTGAGCACCAGGGGTGGGGTCCCTCGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000215798.10
ENST00000332468.5
CDS CAA 90 bp GGGCCACTGCCCTTATTCTCCTGGTGGAACTGGGCCGCCTGCTCCTaGCCCACGTATGCCACTGCAATCCAGCCTTCCACTGGTGCCTCC +
Preference number: 6 (lower is better)
Translates to: GPLPLFSWWNWAACS*PTYATAIQPSTGAS
Trigger: GGAGGCACCAGTGGAAGGCTGGATTGCAGTGGCATACGTGGGCAAGGAGCAGGCGGCCCAGTTCCACCAGGAGAATAAGGGCAGTGGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215798.10
ENST00000382363.8
ENST00000431544.2
ENST00000473077.1
CDS GCA 72 bp TGGGGCCAGTCCTCTCTGCCCACAGAGCCACTTCCTTaGTCCAAGCTCCAGGCTCTGGCACCTCCTTCCCAT +
Preference number: 6 (lower is better)
Translates to: WGQSSLPTEPLP*SKLQALAPPSH
Trigger: ATGGGAAGGAGGTGCCAGAGCCTGGAGCTTGGAGCAAGGAAGTGGCTCTGTGGGCAGAGAGGACTGGCCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463319.1
CDS GCA 72 bp TGTGGTGGGGGAGGGAGCCGGGGTCATCACAGTGGATaGCAAGGCCAGAGTTCCCAGAGCATCTGGCTCTCT +
Preference number: 6 (lower is better)
Translates to: CGGGGSRGHHSG*QGQSSQSIWLS
Trigger: AGAGAGCCAGATGCTCTGGGAACTCTGGCCTTGGCATCCACTGTGATGACCCCGGCTCCCTCCCCCACCACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000473077.1
CDS GCA 72 bp CCACTGCCCTTATTCTCCTGGTGGAACTGGGCCGCCTaGTCCTTGCCCACGTATGCCACTGCAATCCAGCCT +
Preference number: 6 (lower is better)
Translates to: PLPLFSWWNWAA*SLPTYATAIQP
Trigger: AGGCTGGATTGCAGTGGCATACGTGGGCAAGGAGCAGGCGGCCCAGTTCCACCAGGAGAATAAGGGCAGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215798.10
ENST00000382363.8
ENST00000431544.2
ENST00000473077.1
CDS CCA 72 bp GGCAGGAAGGGTCCATCCCCATGTGCAGAGTCCAGCTaGGCAGCTAATCATCGGAGTAGCGGTTCCCTGCAG +
Preference number: 6 (lower is better)
Translates to: GRKGPSPCAESS*AANHRSSGSLQ
Trigger: CTGCAGGGAACCGCTACTCCGATGATTAGCTGCCCAGCTGGACTCTGCACATGGGGATGGACCCTTCCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215798.10
ENST00000332468.5
CDS CCA 72 bp GGCAGGAAGGGTCCATCCCCATGTGCAGAGTCCAGCTaGGCAGCTAATCATCGGAGTAGCGGTTCCCCAGGA +
Preference number: 6 (lower is better)
Translates to: GRKGPSPCAESS*AANHRSSGSPG
Trigger: TCCTGGGGAACCGCTACTCCGATGATTAGCTGCCCAGCTGGACTCTGCACATGGGGATGGACCCTTCCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382363.8
ENST00000630264.1
ENST00000631046.2
CDS GCA 72 bp CCTTATTCTCCTGGTGGAACTGGGCCGCCTGCTCCTTaGCCACGTATGCCACTGCAATCCAGCCTTCCACTG +
Preference number: 6 (lower is better)
Translates to: PYSPGGTGPPAP*PRMPLQSSLPL
Trigger: CAGTGGAAGGCTGGATTGCAGTGGCATACGTGGGCAAGGAGCAGGCGGCCCAGTTCCACCAGGAGAATAAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215798.10
ENST00000382363.8
ENST00000431544.2
ENST00000473077.1
CDS CAA 72 bp CCCTTATTCTCCTGGTGGAACTGGGCCGCCTGCTCCTaGCCCACGTATGCCACTGCAATCCAGCCTTCCACT +
Preference number: 6 (lower is better)
Translates to: PLFSWWNWAACS*PTYATAIQPST
Trigger: AGTGGAAGGCTGGATTGCAGTGGCATACGTGGGCAAGGAGCAGGCGGCCCAGTTCCACCAGGAGAATAAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215798.10
ENST00000382363.8
ENST00000431544.2
ENST00000473077.1
CDS CAA 90 bp TTGGAGAGGCCACAGGTGGTCCACAAGGTCAACTTCCACTCGATATaGGCAGACAGGGACTCTCCGCTGGTGATCTCAGCCGTGGCCTGG +
Preference number: 6 (lower is better)
Translates to: LERPQVVHKVNFHSI*ADRDSPLVISAVAW
Trigger: CCAGGCCACGGCTGAGATCACCAGCGGAGAGTCCCTGTCTGCCAATATCGAGTGGAAGTTGACCTTGTGGACCACCTGTGGCCTCTCCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215798.10
ENST00000382363.8
ENST00000463319.1
ENST00000473077.1
CDS GCA 72 bp TATGCCACTGCAATCCAGCCTTCCACTGGTGCCTCCTaGTCGGCATCCACGATGTCCATCTGTGTGGCAAGG +
Preference number: 6 (lower is better)
Translates to: YATAIQPSTGAS*SASTMSICVAR
Trigger: CCTTGCCACACAGATGGACATCGTGGATGCCGAGCAGGAGGCACCAGTGGAAGGCTGGATTGCAGTGGCATA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473077.1
CDS CCA 72 bp GGCAGACCAAGTCCTGCCATCCTCCATAGCCATCCTTaGAGAGGCCACAGGTGGTCCACAAGGTCAACTTCC +
Preference number: 6 (lower is better)
Translates to: GRPSPAILHSHP*RGHRWSTRSTS
Trigger: GGAAGTTGACCTTGTGGACCACCTGTGGCCTCTCCAAGGATGGCTATGGAGGATGGCAGGACTTGGTCTGCC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000215798.10
ENST00000382363.8
ENST00000463319.1
CDS TCA 72 bp ATATGTCCAGCTCTCGGACCACGTTGTGGTTCAGGATaGGAAGAAGCAGGGCAGAGGCACCCAGGAAGAGGG +
Preference number: 6 (lower is better)
Translates to: ICPALGPRCGSG*EEAGQRHPGRG
Trigger: CCCTCTTCCTGGGTGCCTCTGCCCTGCTTCTTCTCATCCTGAACCACAACGTGGTCCGAGAGCTGGACATAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215798.10
ENST00000382363.8
ENST00000431544.2
ENST00000473077.1
CDS CAA 72 bp CCACAGGTGGTCCACAAGGTCAACTTCCACTCGATATaGGCAGACAGGGACTCTCCGCTGGTGATCTCAGCC +
Preference number: 6 (lower is better)
Translates to: PQVVHKVNFHSI*ADRDSPLVISA
Trigger: GGCTGAGATCACCAGCGGAGAGTCCCTGTCTGCCAATATCGAGTGGAAGTTGACCTTGTGGACCACCTGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215798.10
ENST00000382363.8
ENST00000463319.1
ENST00000473077.1
CDS GCA 72 bp TATGCCACTGCAATCCAGCCTTCCACTGGTGCCTCCTaGTCGGCATCCACGATGTCCATCTGTAATTCCAGC +
Preference number: 6 (lower is better)
Translates to: YATAIQPSTGAS*SASTMSICNSS
Trigger: GCTGGAATTACAGATGGACATCGTGGATGCCGAGCAGGAGGCACCAGTGGAAGGCTGGATTGCAGTGGCATA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431544.2
CDS TCA 72 bp CCTGGGTCCTCTGCAGCAATGCATCCAACAGCTTGGTaGCATTGGAGGAATAATGGAGGACGATCACTGGCC +
Preference number: 6 (lower is better)
Translates to: PGSSAAMHPTAW*HWRNNGGRSLA
Trigger: GGCCAGTGATCGTCCTCCATTATTCCTCCAATGTCACCAAGCTGTTGGATGCATTGCTGCAGAGGACCCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000215798.10
ENST00000382363.8
ENST00000473077.1
CDS GCA 72 bp GCCAGGTTTTCCAGGGTCCAAGTCAGGCAGAACAAATaGAGCAATGTGGAACAGACGGAAACTCCAGCTCTG +
Preference number: 6 (lower is better)
Translates to: ARFSRVQVRQNK*SNVEQTETPAL
Trigger: CAGAGCTGGAGTTTCCGTCTGTTCCACATTGCTGCATTTGTTCTGCCTGACTTGGACCCTGGAAAACCTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431544.2
CDS CCA 72 bp CTTGGTGACATTGGAGGAATAATGGAGGACGATCACTaGCCTGAGCAGAAGCTGGGATATGTCCAGCTCTCG +
Preference number: 6 (lower is better)
Translates to: LGDIGGIMEDDH*PEQKLGYVQLS
Trigger: CGAGAGCTGGACATATCCCAGCTTCTGCTCAGGCCAGTGATCGTCCTCCATTATTCCTCCAATGTCACCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215798.10
ENST00000382363.8
ENST00000431544.2
ENST00000473077.1
CDS CCA 72 bp CCAGGGTCCAAGTCAGGCAGAACAAATGCAGCAATGTaGAACAGACGGAAACTCCAGCTCTGTCATTTCCTC +
Preference number: 6 (lower is better)
Translates to: PGSKSGRTNAAM*NRRKLQLCHFL
Trigger: GAGGAAATGACAGAGCTGGAGTTTCCGTCTGTTCCACATTGCTGCATTTGTTCTGCCTGACTTGGACCCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431544.2
CDS CAA 72 bp GCGACAAGAGTGAAACTCCGTCTCTTTTGTCAGAAATaGAAGAGGGCCAGGTTTTCCAGGGTCCAAGTCAGG +
Preference number: 6 (lower is better)
Translates to: ATRVKLRLFCQK*KRARFSRVQVR
Trigger: CCTGACTTGGACCCTGGAAAACCTGGCCCTCTTCAATTTCTGACAAAAGAGACGGAGTTTCACTCTTGTCGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000431544.2