RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RNF214 (Homo sapiens)

Ensembl gene IDs: ENSG00000167257

Ensembl transcript IDs: ENST00000300650.9, ENST00000524917.5, ENST00000529869.1, ENST00000530849.1, ENST00000531287.5, ENST00000531452.5, ENST00000534428.5, ENST00000534709.1

Found 414 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GAATGGGAAAGGGTGAGGACTTCACAATGTTGGCCTGTCAGAGCTTaGTTAGAAGCCAAGACAGTGGCAGCAAAGGAAGACTTGGCCCAG +
Preference number: 1 (lower is better)
Translates to: EWERVRTSQCWPVRA*LEAKTVAAKEDLAQ
Trigger: CTGGGCCAAGTCTTCCTTTGCTGCCACTGTCTTGGCTTCTAATCAAGCTCTGACAGGCCAACATTGTGAAGTCCTCACCCTTTCCCATTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300650.9
ENST00000530849.1
3UTR CCA 90 bp CCAAGACAGTGGCAGCAAAGGAAGACTTGGCCCAGGAAAAACCTGTaGGTTGTGCTAATTTCTGTCCAGAAAATAGGGTGGACAGAAGCT +
Preference number: 1 (lower is better)
Translates to: PRQWQQRKTWPRKNL*VVLISVQKIGWTEA
Trigger: AGCTTCTGTCCACCCTATTTTCTGGACAGAAATTAGCACAACCCACAGGTTTTTCCTGGGCCAAGTCTTCCTTTGCTGCCACTGTCTTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300650.9
ENST00000530849.1
3UTR CCA 90 bp GGTTGTGCTAATTTCTGTCCAGAAAATAGGGTGGACAGAAGCTTGTaGGGTACATGGAGGAATTGGGACCTGGTTATGTTGTTATTCTCG +
Preference number: 1 (lower is better)
Translates to: GCANFCPENRVDRSL*GTWRNWDLVMLLFS
Trigger: CGAGAATAACAACATAACCAGGTCCCAATTCCTCCATGTACCCCACAAGCTTCTGTCCACCCTATTTTCTGGACAGAAATTAGCACAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300650.9
ENST00000530849.1
3UTR TCA 90 bp AGAGTCTCATTTTATCCATTTGGAGTAGAGTGGCTAAAACAATACTaGGGCTTCTGGAGGCTTTCGGTAAGCAAGGCATCTGGTTGGACA +
Preference number: 1 (lower is better)
Translates to: RVSFYPFGVEWLKQY*GFWRLSVSKASGWT
Trigger: TGTCCAACCAGATGCCTTGCTTACCGAAAGCCTCCAGAAGCCTCAGTATTGTTTTAGCCACTCTACTCCAAATGGATAAAATGAGACTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300650.9
ENST00000530849.1
ENST00000531452.5
3UTR CCA 90 bp ATAGGGTGGACAGAAGCTTGTGGGGTACATGGAGGAATTGGGACCTaGTTATGTTGTTATTCTCGGACTGTGAATTTTGGTGATGTAAAA +
Preference number: 1 (lower is better)
Translates to: IGWTEACGVHGGIGT*LCCYSRTVNFGDVK
Trigger: TTTTACATCACCAAAATTCACAGTCCGAGAATAACAACATAACCAGGTCCCAATTCCTCCATGTACCCCACAAGCTTCTGTCCACCCTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300650.9
ENST00000530849.1
3UTR GCA 90 bp TATCATAATTTCAAGGCCAAACTAAACATCATCTTCCCTACAATCTaGATCCCCCAAAGGAATTGCAAGATGAGGGGGAACAGACTGTTT +
Preference number: 1 (lower is better)
Translates to: YHNFKAKLNIIFPTI*IPQRNCKMRGNRLF
Trigger: AAACAGTCTGTTCCCCCTCATCTTGCAATTCCTTTGGGGGATGCAGATTGTAGGGAAGATGATGTTTAGTTTGGCCTTGAAATTATGATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000300650.9
ENST00000530849.1
ENST00000531452.5
3UTR GCA 90 bp AAACTAAACATCATCTTCCCTACAATCTGCATCCCCCAAAGGAATTaGAAGATGAGGGGGAACAGACTGTTTCTGCATAATATACATAGT +
Preference number: 1 (lower is better)
Translates to: KLNIIFPTICIPQRN*KMRGNRLFLHNIHS
Trigger: ACTATGTATATTATGCAGAAACAGTCTGTTCCCCCTCATCTTGCAATTCCTTTGGGGGATGCAGATTGTAGGGAAGATGATGTTTAGTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000300650.9
ENST00000530849.1
ENST00000531452.5
3UTR-3UTR TCA 90 bp AGAAGCTTGTGGGGTACATGGAGGAATTGGGACCTGGTTATGTTGTTATTCTCGTGGTTGGACAGTGGGTaGGCACCAGGCTTTAAATCT +
Preference number: 2 (lower is better)
Translates to: RSLWGTWRNWDLVMLLFSWLDSG*APGFKS
Trigger: AGATTTAAAGCCTGGTGCTCACCCACTGTCCAACCA...CGAGAATAACAACATAACCAGGTCCCAATTCCTCCATGTACCCCACAAGCTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300650.9
ENST00000530849.1
3UTR-3UTR CCA 90 bp CTCATTTTATCCATTTGGAGTAGAGTGGCTAAAACAATACTGAGGCTTCTGGAGAGCAAGGCATCTGGTTaGACAGTGGGTGAGCACCAG +
Preference number: 2 (lower is better)
Translates to: LILSIWSRVAKTILRLLESKASG*TVGEHQ
Trigger: CTGGTGCTCACCCACTGTCCAACCAGATGCCTTGCT...CTCCAGAAGCCTCAGTATTGTTTTAGCCACTCTACTCCAAATGGATAAAATGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300650.9
ENST00000530849.1
ENST00000531452.5
3UTR-3UTR TCA 90 bp CTCATTTTATCCATTTGGAGTAGAGTGGCTAAAACAATACTGAGGCTTCTGGAGAAATGGACTAGAGGCTaGGCCAAACCAAAGCAGAAT +
Preference number: 2 (lower is better)
Translates to: LILSIWSRVAKTILRLLEKWTRG*AKPKQN
Trigger: ATTCTGCTTTGGTTTGGCTCAGCCTCTAGTCCATTT...CTCCAGAAGCCTCAGTATTGTTTTAGCCACTCTACTCCAAATGGATAAAATGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300650.9
ENST00000530849.1
ENST00000531452.5
3UTR-3UTR GCA 90 bp ATTTTATCCATTTGGAGTAGAGTGGCTAAAACAATACTGAGGCTTCTGGAGGCTATCTTCCCTACAATCTaGATCCCCCAAAGGAATTGC +
Preference number: 2 (lower is better)
Translates to: ILSIWSRVAKTILRLLEAIFPTI*IPQRNC
Trigger: GCAATTCCTTTGGGGGATGCAGATTGTAGGGAAGAT...AGCCTCCAGAAGCCTCAGTATTGTTTTAGCCACTCTACTCCAAATGGATAAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000300650.9
ENST00000530849.1
ENST00000531452.5
3UTR-3UTR TCA 90 bp AGAGTCACAGCTTTCCCAGGTATAAAACCTAAAATTAAGAAGTACAATAAGCAGTGGCTAAAACAATACTaGGGCTTCTGGAGGCTTTCG +
Preference number: 2 (lower is better)
Translates to: RVTAFPGIKPKIKKYNKQWLKQY*GFWRLS
Trigger: CGAAAGCCTCCAGAAGCCTCAGTATTGTTTTAGCCA...CTGCTTATTGTACTTCTTAATTTTAGGTTTTATACCTGGGAAAGCTGTGACTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300650.9
ENST00000530849.1
3UTR-3UTR GCA 90 bp CTAGGTGGTTTTTATATTGTATTTGAAAACAGCCCTGGGCAGGGATATCATAATATCTTCCCTACAATCTaGATCCCCCAAAGGAATTGC +
Preference number: 2 (lower is better)
Translates to: LGGFYIVFENSPGQGYHNIFPTI*IPQRNC
Trigger: GCAATTCCTTTGGGGGATGCAGATTGTAGGGAAGAT...ATTATGATATCCCTGCCCAGGGCTGTTTTCAAATACAATATAAAAACCACCTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000300650.9
ENST00000530849.1
ENST00000531452.5
3UTR-3UTR TCA 90 bp AGAGTCACAGCTTTCCCAGGTATAAAACCTAAAATTAAGAAGTACAATAAGCAGAAATGGACTAGAGGCTaGGCCAAACCAAAGCAGAAT +
Preference number: 2 (lower is better)
Translates to: RVTAFPGIKPKIKKYNKQKWTRG*AKPKQN
Trigger: ATTCTGCTTTGGTTTGGCTCAGCCTCTAGTCCATTT...CTGCTTATTGTACTTCTTAATTTTAGGTTTTATACCTGGGAAAGCTGTGACTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300650.9
ENST00000530849.1
3UTR CCA 72 bp AGGGTGGACAGAAGCTTGTGGGGTACATGGAGGAATTaGGACCTGGTTATGTTGTTATTCTCGGACTGTGAA +
Preference number: 3 (lower is better)
Translates to: RVDRSLWGTWRN*DLVMLLFSDCE
Trigger: TTCACAGTCCGAGAATAACAACATAACCAGGTCCCAATTCCTCCATGTACCCCACAAGCTTCTGTCCACCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300650.9
ENST00000530849.1
3UTR CCA 72 bp TGGCAGCAAAGGAAGACTTGGCCCAGGAAAAACCTGTaGGTTGTGCTAATTTCTGTCCAGAAAATAGGGTGG +
Preference number: 3 (lower is better)
Translates to: WQQRKTWPRKNL*VVLISVQKIGW
Trigger: CCACCCTATTTTCTGGACAGAAATTAGCACAACCCACAGGTTTTTCCTGGGCCAAGTCTTCCTTTGCTGCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300650.9
ENST00000530849.1
3UTR-3UTR CAA 90 bp CCCTACAATCTGCATCCCCCAAAGGAATTGCAAGATGAGGGGGAACAGACTGTTAGAGTTTTAGAAATCTaGAACCCGCGCTTCCTGTTC +
Preference number: 3 (lower is better)
Translates to: PYNLHPPKELQDEGEQTVRVLEI*NPRFLF
Trigger: GAACAGGAAGCGCGGGTTCAAGATTTCTAAAACTCT...AACAGTCTGTTCCCCCTCATCTTGCAATTCCTTTGGGGGATGCAGATTGTAGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000300650.9
ENST00000530849.1
ENST00000531452.5
3UTR-3UTR CAA 90 bp AACATCATCTTCCCTACAATCTGCATCCCCCAAAGGAATTGCAAGATGAGGGGGAGAGTTTTAGAAATCTaGAACCCGCGCTTCCTGTTC +
Preference number: 3 (lower is better)
Translates to: NIIFPTICIPQRNCKMRGRVLEI*NPRFLF
Trigger: GAACAGGAAGCGCGGGTTCAAGATTTCTAAAACTCT...CCCCCTCATCTTGCAATTCCTTTGGGGGATGCAGATTGTAGGGAAGATGATGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000300650.9
ENST00000530849.1
ENST00000531452.5
3UTR CCA 72 bp AATTTCTGTCCAGAAAATAGGGTGGACAGAAGCTTGTaGGGTACATGGAGGAATTGGGACCTGGTTATGTTG +
Preference number: 3 (lower is better)
Translates to: NFCPENRVDRSL*GTWRNWDLVML
Trigger: CAACATAACCAGGTCCCAATTCCTCCATGTACCCCACAAGCTTCTGTCCACCCTATTTTCTGGACAGAAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300650.9
ENST00000530849.1
3UTR GCA 72 bp ATCATCTTCCCTACAATCTGCATCCCCCAAAGGAATTaGAAGATGAGGGGGAACAGACTGTTTCTGCATAAT +
Preference number: 3 (lower is better)
Translates to: IIFPTICIPQRN*KMRGNRLFLHN
Trigger: ATTATGCAGAAACAGTCTGTTCCCCCTCATCTTGCAATTCCTTTGGGGGATGCAGATTGTAGGGAAGATGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000300650.9
ENST00000530849.1
ENST00000531452.5
3UTR CCA 72 bp ACAGAAGCTTGTGGGGTACATGGAGGAATTGGGACCTaGTTATGTTGTTATTCTCGGACTGTGAATTTTGGT +
Preference number: 3 (lower is better)
Translates to: TEACGVHGGIGT*LCCYSRTVNFG
Trigger: ACCAAAATTCACAGTCCGAGAATAACAACATAACCAGGTCCCAATTCCTCCATGTACCCCACAAGCTTCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300650.9
ENST00000530849.1
3UTR-3UTR CAA 90 bp CTCATTTTATCCATTTGGAGTAGAGTGGCTAAAACAATACTGAGGCTTCTGGAGGTTTTTATATTGTATTaGAAAACAGCCCTGGGCAGG +
Preference number: 3 (lower is better)
Translates to: LILSIWSRVAKTILRLLEVFILY*KTALGR
Trigger: CCTGCCCAGGGCTGTTTTCAAATACAATATAAAAAC...CTCCAGAAGCCTCAGTATTGTTTTAGCCACTCTACTCCAAATGGATAAAATGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000300650.9
ENST00000530849.1
ENST00000531452.5
3UTR-3UTR CAA 90 bp AGAGTCACAGCTTTCCCAGGTATAAAACCTAAAATTAAGAAGTACAATAAGCAGGGGTACATGGAGGAATaGGGACCTGGTTATGTTGTT +
Preference number: 3 (lower is better)
Translates to: RVTAFPGIKPKIKKYNKQGYMEE*GPGYVV
Trigger: AACAACATAACCAGGTCCCAATTCCTCCATGTACCC...CTGCTTATTGTACTTCTTAATTTTAGGTTTTATACCTGGGAAAGCTGTGACTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300650.9
ENST00000530849.1
CDS-3UTR CCA 90 bp AGGCTTTCGGTAAGCAAGGCATCTGGTTGGACAGTGGGTGAGCACCAGGCTTTAGGCAGGGGGCATGTGTaGACCGTGGGGGCTGACAAG +
Preference number: 4 (lower is better)
Translates to: RLSVSKASGWTVGEHQALGRGHV*TVGADK
Trigger: CTTGTCAGCCCCCACGGTCCACACATGCCCCCTGCC...TAAAGCCTGGTGCTCACCCACTGTCCAACCAGATGCCTTGCTTACCGAAAGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000300650.9
ENST00000530849.1
ENST00000531452.5
CDS-3UTR TCA 90 bp AACATCATCTTCCCTACAATCTGCATCCCCCAAAGGAATTGCAAGATGAGGGGGCAGGTGGCTGGAGCCTaGGTACTTGCTGCCACCCGC +
Preference number: 4 (lower is better)
Translates to: NIIFPTICIPQRNCKMRGQVAGA*VLAATR
Trigger: GCGGGTGGCAGCAAGTACTCAGGCTCCAGCCACCTG...CCCCCTCATCTTGCAATTCCTTTGGGGGATGCAGATTGTAGGGAAGATGATGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000530849.1
CDS-3UTR CCA 90 bp AGGCTTTCGGTAAGCAAGGCATCTGGTTGGACAGTGGGTGAGCACCAGGCTTTAGACCGAGTGACTGGATaGAGGCTCTCCCGAAGGCTT +
Preference number: 4 (lower is better)
Translates to: RLSVSKASGWTVGEHQALDRVTG*RLSRRL
Trigger: AAGCCTTCGGGAGAGCCTCCATCCAGTCACTCGGTC...TAAAGCCTGGTGCTCACCCACTGTCCAACCAGATGCCTTGCTTACCGAAAGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300650.9
ENST00000531452.5
CDS-3UTR TCA 90 bp AGAAGCTTGTGGGGTACATGGAGGAATTGGGACCTGGTTATGTTGTTATTCTCGGTGGACCGTGGGGGCTaGCAAGGGAACCCAAGCCAG +
Preference number: 4 (lower is better)
Translates to: RSLWGTWRNWDLVMLLFSVDRGG*QGNPSQ
Trigger: CTGGCTTGGGTTCCCTTGTCAGCCCCCACGGTCCAC...CGAGAATAACAACATAACCAGGTCCCAATTCCTCCATGTACCCCACAAGCTTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300650.9
ENST00000530849.1
CDS-3UTR GCA 90 bp AGGCTTTCGGTAAGCAAGGCATCTGGTTGGACAGTGGGTGAGCACCAGGCTTTATTCCTGGAGGCAAGCTaGTTAGTATGGCACCCTGCC +
Preference number: 4 (lower is better)
Translates to: RLSVSKASGWTVGEHQALFLEAS*LVWHPA
Trigger: GGCAGGGTGCCATACTAAGCAGCTTGCCTCCAGGAA...TAAAGCCTGGTGCTCACCCACTGTCCAACCAGATGCCTTGCTTACCGAAAGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300650.9
ENST00000531452.5
CDS-3UTR CCA 90 bp AACATCATCTTCCCTACAATCTGCATCCCCCAAAGGAATTGCAAGATGAGGGGGGGCATGTGTGGACCGTaGGGGCTGACAAGGGAACCC +
Preference number: 4 (lower is better)
Translates to: NIIFPTICIPQRNCKMRGGMCGP*GLTREP
Trigger: GGGTTCCCTTGTCAGCCCCCACGGTCCACACATGCC...CCCCCTCATCTTGCAATTCCTTTGGGGGATGCAGATTGTAGGGAAGATGATGTT
54% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000300650.9
ENST00000530849.1
ENST00000531452.5
CDS-3UTR CCA 90 bp CAGAAGCTTGTGGGGTACATGGAGGAATTGGGACCTGGTTATGTTGTTATTCTCGGCAGGGGGCATGTGTaGACCGTGGGGGCTGACAAG +
Preference number: 4 (lower is better)
Translates to: QKLVGYMEELGPGYVVILGRGHV*TVGADK
Trigger: CTTGTCAGCCCCCACGGTCCACACATGCCCCCTGCC...GAGAATAACAACATAACCAGGTCCCAATTCCTCCATGTACCCCACAAGCTTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000300650.9
ENST00000530849.1
CDS-3UTR CCA 90 bp AGGCTTTCGGTAAGCAAGGCATCTGGTTGGACAGTGGGTGAGCACCAGGCTTTAATGGGTACACGCCATTaGATGCAGCTCACTGGGCTG +
Preference number: 4 (lower is better)
Translates to: RLSVSKASGWTVGEHQALMGTRH*MQLTGL
Trigger: CAGCCCAGTGAGCTGCATCCAATGGCGTGTACCCAT...TAAAGCCTGGTGCTCACCCACTGTCCAACCAGATGCCTTGCTTACCGAAAGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300650.9
ENST00000530849.1
ENST00000531452.5
CDS-3UTR CCA 90 bp CCCTACAATCTGCATCCCCCAAAGGAATTGCAAGATGAGGGGGAACAGACTGTTGGCAGGGTTCAGGATTaGGAAAGACAAGGAGCGGGG +
Preference number: 4 (lower is better)
Translates to: PYNLHPPKELQDEGEQTVGRVQD*ERQGAG
Trigger: CCCCGCTCCTTGTCTTTCCCAATCCTGAACCCTGCC...AACAGTCTGTTCCCCCTCATCTTGCAATTCCTTTGGGGGATGCAGATTGTAGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000300650.9
ENST00000530849.1
ENST00000531452.5
CDS-3UTR TCA 90 bp AGGCTTTCGGTAAGCAAGGCATCTGGTTGGACAGTGGGTGAGCACCAGGCTTTAGAAACACCTGAAGCATaGAGTCTGTCTCTGATGGGG +
Preference number: 4 (lower is better)
Translates to: RLSVSKASGWTVGEHQALETPEA*SLSLMG
Trigger: CCCCATCAGAGACAGACTTCATGCTTCAGGTGTTTC...TAAAGCCTGGTGCTCACCCACTGTCCAACCAGATGCCTTGCTTACCGAAAGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300650.9
ENST00000530849.1
ENST00000531452.5
CDS-3UTR TCA 90 bp AGGCTTTCGGTAAGCAAGGCATCTGGTTGGACAGTGGGTGAGCACCAGGCTTTATGGTTGGACAGTGGGTaGGCACCAGGCTTTAAATCT +
Preference number: 4 (lower is better)
Translates to: RLSVSKASGWTVGEHQALWLDSG*APGFKS
Trigger: AGATTTAAAGCCTGGTGCTCACCCACTGTCCAACCA...TAAAGCCTGGTGCTCACCCACTGTCCAACCAGATGCCTTGCTTACCGAAAGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300650.9
ENST00000530849.1
ENST00000531452.5
CDS-3UTR GCA 90 bp TTCCCTACAATCTGCATCCCCCAAAGGAATTGCAAGATGAGGGGGAACAGACTGCCTAAAACCACCTGGTaGGCTGCTGAGGTGTCACCT +
Preference number: 4 (lower is better)
Translates to: FPTICIPQRNCKMRGNRLPKTTW*AAEVSP
Trigger: AGGTGACACCTCAGCAGCGCACCAGGTGGTTTTAGG...CAGTCTGTTCCCCCTCATCTTGCAATTCCTTTGGGGGATGCAGATTGTAGGGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000300650.9
ENST00000531452.5
CDS-3UTR GCA 90 bp CAGAAGCTTGTGGGGTACATGGAGGAATTGGGACCTGGTTATGTTGTTATTCTCGTCCCCCTCCTCTCCTaGTGTGCTGGCCACATCCTT +
Preference number: 4 (lower is better)
Translates to: QKLVGYMEELGPGYVVILVPLLS*CAGHIL
Trigger: AAGGATGTGGCCAGCACAGCAGGAGAGGAGGGGGAC...GAGAATAACAACATAACCAGGTCCCAATTCCTCCATGTACCCCACAAGCTTCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300650.9
CDS-3UTR GCA 90 bp AGGCTTTCGGTAAGCAAGGCATCTGGTTGGACAGTGGGTGAGCACCAGGCTTTATGCCATGGTGGTACGTaGTGTCTTGATCTGCTGAAG +
Preference number: 4 (lower is better)
Translates to: RLSVSKASGWTVGEHQALCHGGT*CLDLLK
Trigger: CTTCAGCAGATCAAGACAGCACGTACCACCATGGCA...TAAAGCCTGGTGCTCACCCACTGTCCAACCAGATGCCTTGCTTACCGAAAGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300650.9
ENST00000530849.1
ENST00000531452.5
CDS-3UTR GCA 90 bp AACATCATCTTCCCTACAATCTGCATCCCCCAAAGGAATTGCAAGATGAGGGGGCTCCATGGTCAGGCCTaGCATGGTGGTACGTGCTGT +
Preference number: 4 (lower is better)
Translates to: NIIFPTICIPQRNCKMRGLHGQA*HGGTCC
Trigger: ACAGCACGTACCACCATGGCAGGCCTGACCATGGAG...CCCCCTCATCTTGCAATTCCTTTGGGGGATGCAGATTGTAGGGAAGATGATGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000300650.9
ENST00000530849.1
ENST00000531452.5
CDS-3UTR GCA 90 bp AACATCATCTTCCCTACAATCTGCATCCCCCAAAGGAATTGCAAGATGAGGGGGGGAACAAGGCCCGGATaGGACCAAGTGGCTGAGTAC +
Preference number: 4 (lower is better)
Translates to: NIIFPTICIPQRNCKMRGGTRPG*DQVAEY
Trigger: GTACTCAGCCACTTGGTCGCATCCGGGCCTTGTTCC...CCCCCTCATCTTGCAATTCCTTTGGGGGATGCAGATTGTAGGGAAGATGATGTT
52% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300650.9
ENST00000531452.5
CDS-3UTR GCA 90 bp AACATCATCTTCCCTACAATCTGCATCCCCCAAAGGAATTGCAAGATGAGGGGGGTACACGCCATTGGATaGAGCTCACTGGGCTGGACG +
Preference number: 4 (lower is better)
Translates to: NIIFPTICIPQRNCKMRGVHAIG*SSLGWT
Trigger: CGTCCAGCCCAGTGAGCTGCATCCAATGGCGTGTAC...CCCCCTCATCTTGCAATTCCTTTGGGGGATGCAGATTGTAGGGAAGATGATGTT
52% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000300650.9
ENST00000530849.1
ENST00000531452.5
CDS-3UTR CCA 90 bp AGGCTTTCGGTAAGCAAGGCATCTGGTTGGACAGTGGGTGAGCACCAGGCTTTACGTGCAGCAACCAACTaGATAAGTTCCTCCATGGTC +
Preference number: 4 (lower is better)
Translates to: RLSVSKASGWTVGEHQALRAATN*ISSSMV
Trigger: GACCATGGAGGAACTTATCCAGTTGGTTGCTGCACG...TAAAGCCTGGTGCTCACCCACTGTCCAACCAGATGCCTTGCTTACCGAAAGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300650.9
ENST00000530849.1
ENST00000531452.5
CDS-3UTR CCA 90 bp AGGCTTTCGGTAAGCAAGGCATCTGGTTGGACAGTGGGTGAGCACCAGGCTTTAAGCTTGTGGGGTACATaGAGGAATTGGGACCTGGTT +
Preference number: 4 (lower is better)
Translates to: RLSVSKASGWTVGEHQALSLWGT*RNWDLV
Trigger: AACCAGGTCCCAATTCCTCCATGTACCCCACAAGCT...TAAAGCCTGGTGCTCACCCACTGTCCAACCAGATGCCTTGCTTACCGAAAGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300650.9
ENST00000530849.1
CDS-3UTR TCA 90 bp AGAGTTTTAGAAATCTTGAACCCGCGCTTCCTGTTCACATCAGTTTCTCTTCTTGTGGACCGTGGGGGCTaGCAAGGGAACCCAAGCCAG +
Preference number: 4 (lower is better)
Translates to: RVLEILNPRFLFTSVSLLVDRGG*QGNPSQ
Trigger: CTGGCTTGGGTTCCCTTGTCAGCCCCCACGGTCCAC...AAGAAGAGAAACTGATGTGAACAGGAAGCGCGGGTTCAAGATTTCTAAAACTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000300650.9
ENST00000530849.1
ENST00000531452.5
CDS-3UTR TCA 90 bp AGGCTTTCGGTAAGCAAGGCATCTGGTTGGACAGTGGGTGAGCACCAGGCTTTAAGACCTTCCAGGATATaGAACTTGGGCAGAAGGCAA +
Preference number: 4 (lower is better)
Translates to: RLSVSKASGWTVGEHQALRPSRI*NLGRRQ
Trigger: TTGCCTTCTGCCCAAGTTTCATATCCTGGAAGGTCT...TAAAGCCTGGTGCTCACCCACTGTCCAACCAGATGCCTTGCTTACCGAAAGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300650.9
ENST00000531452.5
CDS-3UTR GCA 90 bp AGGCTTTCGGTAAGCAAGGCATCTGGTTGGACAGTGGGTGAGCACCAGGCTTTAGATGAACCAGGATTCTaGTCTGAGTGCTCCAAATGG +
Preference number: 4 (lower is better)
Translates to: RLSVSKASGWTVGEHQALDEPGF*SECSKW
Trigger: CCATTTGGAGCACTCAGAGCAGAATCCTGGTTCATC...TAAAGCCTGGTGCTCACCCACTGTCCAACCAGATGCCTTGCTTACCGAAAGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300650.9
ENST00000531452.5
CDS-3UTR GCA 90 bp CCCTACAATCTGCATCCCCCAAAGGAATTGCAAGATGAGGGGGAACAGACTGTTCCTCCTCTCCTGCTGTaGTGGCCACATCCTTCAAAT +
Preference number: 4 (lower is better)
Translates to: PYNLHPPKELQDEGEQTVPPLLL*WPHPSN
Trigger: ATTTGAAGGATGTGGCCAGCACAGCAGGAGAGGAGG...AACAGTCTGTTCCCCCTCATCTTGCAATTCCTTTGGGGGATGCAGATTGTAGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000300650.9
ENST00000531452.5
CDS-3UTR GCA 90 bp CAGAAGCTTGTGGGGTACATGGAGGAATTGGGACCTGGTTATGTTGTTATTCTCCAAGGAGCGGGGATCTaGACTGGGCATAACCATGGG +
Preference number: 4 (lower is better)
Translates to: QKLVGYMEELGPGYVVILQGAGI*TGHNHG
Trigger: CCCATGGTTATGCCCAGTGCAGATCCCCGCTCCTTG...GAGAATAACAACATAACCAGGTCCCAATTCCTCCATGTACCCCACAAGCTTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300650.9
ENST00000530849.1
CDS-3UTR GCA 90 bp AAACATCATCTTCCCTACAATCTGCATCCCCCAAAGGAATTGCAAGATGAGGGGAGCCAGGGCTATTTCTaGCATGGGAGCCAGGAAGGG +
Preference number: 4 (lower is better)
Translates to: KHHLPYNLHPPKELQDEGSQGYF*HGSQEG
Trigger: CCCTTCCTGGCTCCCATGGCAGAAATAGCCCTGGCT...CCCCTCATCTTGCAATTCCTTTGGGGGATGCAGATTGTAGGGAAGATGATGTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000300650.9
ENST00000530849.1
ENST00000531452.5
CDS-3UTR GCA 90 bp AACATCATCTTCCCTACAATCTGCATCCCCCAAAGGAATTGCAAGATGAGGGGGTGGCTGAGTACTTGCTaGCACCCGCTCATGTTCTGC +
Preference number: 4 (lower is better)
Translates to: NIIFPTICIPQRNCKMRGWLSTC*HPLMFC
Trigger: GCAGAACATGAGCGGGTGGCAGCAAGTACTCAGCCA...CCCCCTCATCTTGCAATTCCTTTGGGGGATGCAGATTGTAGGGAAGATGATGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000300650.9
ENST00000531452.5
CDS-3UTR GCA 90 bp CCCTACAATCTGCATCCCCCAAAGGAATTGCAAGATGAGGGGGAACAGACTGTTAAGTGGCTGAGTACTTaGTGCCACCCGCTCATGTTC +
Preference number: 4 (lower is better)
Translates to: PYNLHPPKELQDEGEQTVKWLST*CHPLMF
Trigger: GAACATGAGCGGGTGGCAGCAAGTACTCAGCCACTT...AACAGTCTGTTCCCCCTCATCTTGCAATTCCTTTGGGGGATGCAGATTGTAGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000300650.9
ENST00000531452.5
CDS-3UTR GCA 90 bp AAACATCATCTTCCCTACAATCTGCATCCCCCAAAGGAATTGCAAGATGAGGGGGTACACGCCATTGGATaGAGCTCACTGGGCTGGACG +
Preference number: 4 (lower is better)
Translates to: KHHLPYNLHPPKELQDEGVHAIG*SSLGWT
Trigger: CGTCCAGCCCAGTGAGCTGCATCCAATGGCGTGTAC...CCCCTCATCTTGCAATTCCTTTGGGGGATGCAGATTGTAGGGAAGATGATGTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000300650.9
ENST00000530849.1
ENST00000531452.5
CDS-3UTR GCA 90 bp AAACATCATCTTCCCTACAATCTGCATCCCCCAAAGGAATTGCAAGATGAGGGGATCTCCTCACCCCAGTaGCTGTCTGGAGCTCACCCA +
Preference number: 4 (lower is better)
Translates to: KHHLPYNLHPPKELQDEGISSPQ*LSGAHP
Trigger: TGGGTGAGCTCCAGACAGGCACTGGGGTGAGGAGAT...CCCCTCATCTTGCAATTCCTTTGGGGGATGCAGATTGTAGGGAAGATGATGTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000300650.9
ENST00000530849.1
CDS-3UTR CCA 90 bp TTCCCTACAATCTGCATCCCCCAAAGGAATTGCAAGATGAGGGGGAACAGACTGTCTCCTAAAACCACCTaGTGCGCTGCTGAGGTGTCA +
Preference number: 4 (lower is better)
Translates to: FPTICIPQRNCKMRGNRLSPKTT*CAAEVS
Trigger: TGACACCTCAGCAGCGCACCAGGTGGTTTTAGGAGA...CAGTCTGTTCCCCCTCATCTTGCAATTCCTTTGGGGGATGCAGATTGTAGGGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000300650.9
ENST00000531452.5
CDS-3UTR CCA 90 bp AGAAGCTTGTGGGGTACATGGAGGAATTGGGACCTGGTTATGTTGTTATTCTCGGACCGAGTGACTGGATaGAGGCTCTCCCGAAGGCTT +
Preference number: 4 (lower is better)
Translates to: RSLWGTWRNWDLVMLLFSDRVTG*RLSRRL
Trigger: AAGCCTTCGGGAGAGCCTCCATCCAGTCACTCGGTC...CGAGAATAACAACATAACCAGGTCCCAATTCCTCCATGTACCCCACAAGCTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300650.9
CDS-3UTR CCA 90 bp CCCTACAATCTGCATCCCCCAAAGGAATTGCAAGATGAGGGGGAACAGACTGTTAGTTTGTCTACTGGTTaGGGCCGGGGAGTTTCAGCA +
Preference number: 4 (lower is better)
Translates to: PYNLHPPKELQDEGEQTVSLSTG*GRGVSA
Trigger: TGCTGAAACTCCCCGGCCCCAACCAGTAGACAAACT...AACAGTCTGTTCCCCCTCATCTTGCAATTCCTTTGGGGGATGCAGATTGTAGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000300650.9
ENST00000530849.1
ENST00000531452.5
CDS-3UTR CCA 90 bp CAGAAGCTTGTGGGGTACATGGAGGAATTGGGACCTGGTTATGTTGTTATTCTCCCGGATGCGACCAAGTaGCTGAGTACTTGCTGCCAC +
Preference number: 4 (lower is better)
Translates to: QKLVGYMEELGPGYVVILPDATK*LSTCCH
Trigger: GTGGCAGCAAGTACTCAGCCACTTGGTCGCATCCGG...GAGAATAACAACATAACCAGGTCCCAATTCCTCCATGTACCCCACAAGCTTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300650.9
CDS-3UTR CCA 90 bp AAACATCATCTTCCCTACAATCTGCATCCCCCAAAGGAATTGCAAGATGAGGGGACTGATTTGGGCCAGTaGAGCAGGGAACAAGGCCCG +
Preference number: 4 (lower is better)
Translates to: KHHLPYNLHPPKELQDEGTDLGQ*SREQGP
Trigger: CGGGCCTTGTTCCCTGCTCCACTGGCCCAAATCAGT...CCCCTCATCTTGCAATTCCTTTGGGGGATGCAGATTGTAGGGAAGATGATGTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300650.9
ENST00000531452.5
CDS-3UTR CCA 90 bp TTCCCTACAATCTGCATCCCCCAAAGGAATTGCAAGATGAGGGGGAACAGACTGATTGGGGTACTGATTTaGGCCAGTGGAGCAGGGAAC +
Preference number: 4 (lower is better)
Translates to: FPTICIPQRNCKMRGNRLIGVLI*ASGAGN
Trigger: GTTCCCTGCTCCACTGGCCCAAATCAGTACCCCAAT...CAGTCTGTTCCCCCTCATCTTGCAATTCCTTTGGGGGATGCAGATTGTAGGGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000300650.9
ENST00000531452.5
CDS-3UTR CCA 90 bp AACATCATCTTCCCTACAATCTGCATCCCCCAAAGGAATTGCAAGATGAGGGGGTTGGATGCAGCTCACTaGGCTGGACGAGTTTCTGGC +
Preference number: 4 (lower is better)
Translates to: NIIFPTICIPQRNCKMRGLDAAH*AGRVSG
Trigger: GCCAGAAACTCGTCCAGCCCAGTGAGCTGCATCCAA...CCCCCTCATCTTGCAATTCCTTTGGGGGATGCAGATTGTAGGGAAGATGATGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000300650.9
ENST00000530849.1
ENST00000531452.5
CDS-3UTR TCA 90 bp AGAAGCTTGTGGGGTACATGGAGGAATTGGGACCTGGTTATGTTGTTATTCTCGGTGGGAGTAGGGATTTaGGGAAGGCTGCTCAGCTTG +
Preference number: 4 (lower is better)
Translates to: RSLWGTWRNWDLVMLLFSVGVGI*GRLLSL
Trigger: CAAGCTGAGCAGCCTTCCTCAAATCCCTACTCCCAC...CGAGAATAACAACATAACCAGGTCCCAATTCCTCCATGTACCCCACAAGCTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300650.9
ENST00000530849.1
CDS-3UTR TCA 90 bp AGTCTCATTTTATCCATTTGGAGTAGAGTGGCTAAAACAATACTGAGGCTTCTGGTGGACCGTGGGGGCTaGCAAGGGAACCCAAGCCAG +
Preference number: 4 (lower is better)
Translates to: SLILSIWSRVAKTILRLLVDRGG*QGNPSQ
Trigger: CTGGCTTGGGTTCCCTTGTCAGCCCCCACGGTCCAC...CAGAAGCCTCAGTATTGTTTTAGCCACTCTACTCCAAATGGATAAAATGAGACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000300650.9
ENST00000530849.1
ENST00000531452.5
CDS-3UTR TCA 90 bp AACATCATCTTCCCTACAATCTGCATCCCCCAAAGGAATTGCAAGATGAGGGGGAGAACATTGGGGTACTaGTTTGGGCCAGTGGAGCAG +
Preference number: 4 (lower is better)
Translates to: NIIFPTICIPQRNCKMRGRTLGY*FGPVEQ
Trigger: CTGCTCCACTGGCCCAAATCAGTACCCCAATGTTCT...CCCCCTCATCTTGCAATTCCTTTGGGGGATGCAGATTGTAGGGAAGATGATGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000300650.9
ENST00000531452.5
CDS-3UTR TCA 90 bp AGGCTTTCGGTAAGCAAGGCATCTGGTTGGACAGTGGGTGAGCACCAGGCTTTAAAATGGACTAGAGGCTaGGCCAAACCAAAGCAGAAT +
Preference number: 4 (lower is better)
Translates to: RLSVSKASGWTVGEHQALKWTRG*AKPKQN
Trigger: ATTCTGCTTTGGTTTGGCTCAGCCTCTAGTCCATTT...TAAAGCCTGGTGCTCACCCACTGTCCAACCAGATGCCTTGCTTACCGAAAGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300650.9
ENST00000530849.1
ENST00000531452.5
CDS-3UTR GCA 90 bp TTCCCTACAATCTGCATCCCCCAAAGGAATTGCAAGATGAGGGGGAACAGACTGCCCACACCTCTCTTCTaGCCTTCTCACAAAGCTTCT +
Preference number: 4 (lower is better)
Translates to: FPTICIPQRNCKMRGNRLPTPLF*PSHKAS
Trigger: AGAAGCTTTGTGAGAAGGGCAGAAGAGAGGTGTGGG...CAGTCTGTTCCCCCTCATCTTGCAATTCCTTTGGGGGATGCAGATTGTAGGGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000300650.9
ENST00000530849.1
ENST00000531452.5
CDS-3UTR GCA 90 bp CCCTACAATCTGCATCCCCCAAAGGAATTGCAAGATGAGGGGGAACAGACTGTTCCCACACCTCTCTTCTaGCCTTCTCACAAAGCTTCT +
Preference number: 4 (lower is better)
Translates to: PYNLHPPKELQDEGEQTVPTPLF*PSHKAS
Trigger: AGAAGCTTTGTGAGAAGGGCAGAAGAGAGGTGTGGG...AACAGTCTGTTCCCCCTCATCTTGCAATTCCTTTGGGGGATGCAGATTGTAGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000300650.9
ENST00000530849.1
ENST00000531452.5
CDS-3UTR GCA 90 bp AGGCTTTCGGTAAGCAAGGCATCTGGTTGGACAGTGGGTGAGCACCAGGCTTTAATCTTCCCTACAATCTaGATCCCCCAAAGGAATTGC +
Preference number: 4 (lower is better)
Translates to: RLSVSKASGWTVGEHQALIFPTI*IPQRNC
Trigger: GCAATTCCTTTGGGGGATGCAGATTGTAGGGAAGAT...TAAAGCCTGGTGCTCACCCACTGTCCAACCAGATGCCTTGCTTACCGAAAGCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000300650.9
ENST00000530849.1
ENST00000531452.5
CDS-3UTR CCA 90 bp TTCCCTACAATCTGCATCCCCCAAAGGAATTGCAAGATGAGGGGGAACAGACTGTCTCCCACTCCTGTTTaGAACGAACTGTCTCCAGTG +
Preference number: 4 (lower is better)
Translates to: FPTICIPQRNCKMRGNRLSPTPV*NELSPV
Trigger: CACTGGAGACAGTTCGTTCCAAACAGGAGTGGGAGA...CAGTCTGTTCCCCCTCATCTTGCAATTCCTTTGGGGGATGCAGATTGTAGGGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000300650.9
ENST00000530849.1
ENST00000531452.5
CDS-3UTR CCA 90 bp AGTCTCATTTTATCCATTTGGAGTAGAGTGGCTAAAACAATACTGAGGCTTCTGAACACCGCCCAAGCCTaGGGGAGGTGGGATGGAGGC +
Preference number: 4 (lower is better)
Translates to: SLILSIWSRVAKTILRLLNTAQA*GRWDGG
Trigger: GCCTCCATCCCACCTCCCCCAGGCTTGGGCGGTGTT...CAGAAGCCTCAGTATTGTTTTAGCCACTCTACTCCAAATGGATAAAATGAGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000300650.9
ENST00000530849.1
ENST00000531452.5
CDS-3UTR CCA 90 bp AGAAGCTTGTGGGGTACATGGAGGAATTGGGACCTGGTTATGTTGTTATTCTCGGGCCTTATTGCACTGTaGGAACCGGGTCAGCAGCTT +
Preference number: 4 (lower is better)
Translates to: RSLWGTWRNWDLVMLLFSGLIAL*EPGQQL
Trigger: AAGCTGCTGACCCGGTTCCCACAGTGCAATAAGGCC...CGAGAATAACAACATAACCAGGTCCCAATTCCTCCATGTACCCCACAAGCTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300650.9
ENST00000530849.1
CDS-3UTR CCA 90 bp AGGCTTTCGGTAAGCAAGGCATCTGGTTGGACAGTGGGTGAGCACCAGGCTTTATCTGCTGAAGAATGTTaGTCATCTGGGCCTTATTGC +
Preference number: 4 (lower is better)
Translates to: RLSVSKASGWTVGEHQALSAEEC*SSGPYC
Trigger: GCAATAAGGCCCAGATGACCAACATTCTTCAGCAGA...TAAAGCCTGGTGCTCACCCACTGTCCAACCAGATGCCTTGCTTACCGAAAGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300650.9
ENST00000530849.1
ENST00000531452.5
CDS-3UTR CCA 90 bp TTCCCTACAATCTGCATCCCCCAAAGGAATTGCAAGATGAGGGGGAACAGACTGCGTGCAGCAACCAACTaGATAAGTTCCTCCATGGTC +
Preference number: 4 (lower is better)
Translates to: FPTICIPQRNCKMRGNRLRAATN*ISSSMV
Trigger: GACCATGGAGGAACTTATCCAGTTGGTTGCTGCACG...CAGTCTGTTCCCCCTCATCTTGCAATTCCTTTGGGGGATGCAGATTGTAGGGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000300650.9
ENST00000530849.1
ENST00000531452.5
CDS-3UTR CCA 90 bp CCCTACAATCTGCATCCCCCAAAGGAATTGCAAGATGAGGGGGAACAGACTGTTGACATAGCTTACAGGTaGCTGGAGCATGTGAAGACC +
Preference number: 4 (lower is better)
Translates to: PYNLHPPKELQDEGEQTVDIAYR*LEHVKT
Trigger: GGTCTTCACATGCTCCAGCCACCTGTAAGCTATGTC...AACAGTCTGTTCCCCCTCATCTTGCAATTCCTTTGGGGGATGCAGATTGTAGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000300650.9
ENST00000531452.5
CDS-3UTR CCA 90 bp AGAAGCTTGTGGGGTACATGGAGGAATTGGGACCTGGTTATGTTGTTATTCTCGTTGGATGCAGCTCACTaGGCTGGACGAGTTTCTGGC +
Preference number: 4 (lower is better)
Translates to: RSLWGTWRNWDLVMLLFSLDAAH*AGRVSG
Trigger: GCCAGAAACTCGTCCAGCCCAGTGAGCTGCATCCAA...CGAGAATAACAACATAACCAGGTCCCAATTCCTCCATGTACCCCACAAGCTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300650.9
ENST00000530849.1
CDS-3UTR TCA 90 bp TTCCCTACAATCTGCATCCCCCAAAGGAATTGCAAGATGAGGGGGAACAGACTGACCAGGATTCTGCTCTaGGTGCTCCAAATGGACATT +
Preference number: 4 (lower is better)
Translates to: FPTICIPQRNCKMRGNRLTRILL*VLQMDI
Trigger: AATGTCCATTTGGAGCACTCAGAGCAGAATCCTGGT...CAGTCTGTTCCCCCTCATCTTGCAATTCCTTTGGGGGATGCAGATTGTAGGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000300650.9
ENST00000531452.5
CDS-3UTR TCA 90 bp TTCCCTACAATCTGCATCCCCCAAAGGAATTGCAAGATGAGGGGGAACAGACTGTCCTTCAAATCAGACTaGGACCCACTGCCAGAAAGA +
Preference number: 4 (lower is better)
Translates to: FPTICIPQRNCKMRGNRLSFKSD*DPLPER
Trigger: TCTTTCTGGCAGTGGGTCTCAGTCTGATTTGAAGGA...CAGTCTGTTCCCCCTCATCTTGCAATTCCTTTGGGGGATGCAGATTGTAGGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000300650.9
ENST00000531452.5
CDS-3UTR TCA 90 bp CCCTACAATCTGCATCCCCCAAAGGAATTGCAAGATGAGGGGGAACAGACTGTTTCCTTCAAATCAGACTaGGACCCACTGCCAGAAAGA +
Preference number: 4 (lower is better)
Translates to: PYNLHPPKELQDEGEQTVSFKSD*DPLPER
Trigger: TCTTTCTGGCAGTGGGTCTCAGTCTGATTTGAAGGA...AACAGTCTGTTCCCCCTCATCTTGCAATTCCTTTGGGGGATGCAGATTGTAGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000300650.9
ENST00000531452.5
CDS-3UTR TCA 90 bp TTCCCTACAATCTGCATCCCCCAAAGGAATTGCAAGATGAGGGGGAACAGACTGTGGTACGTGCTGTCTTaGTCTGCTGAAGAATGTTGG +
Preference number: 4 (lower is better)
Translates to: FPTICIPQRNCKMRGNRLWYVLS*SAEECW
Trigger: CCAACATTCTTCAGCAGATCAAGACAGCACGTACCA...CAGTCTGTTCCCCCTCATCTTGCAATTCCTTTGGGGGATGCAGATTGTAGGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000300650.9
ENST00000530849.1
ENST00000531452.5
CDS-3UTR TCA 90 bp AAACATCATCTTCCCTACAATCTGCATCCCCCAAAGGAATTGCAAGATGAGGGGCTAGGAGACCAGAAGTaGATGGGAAAGGGTGAGGAC +
Preference number: 4 (lower is better)
Translates to: KHHLPYNLHPPKELQDEGLGDQK*MGKGED
Trigger: GTCCTCACCCTTTCCCATTCACTTCTGGTCTCCTAG...CCCCTCATCTTGCAATTCCTTTGGGGGATGCAGATTGTAGGGAAGATGATGTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300650.9
ENST00000530849.1
CDS-3UTR GCA 90 bp AAACATCATCTTCCCTACAATCTGCATCCCCCAAAGGAATTGCAAGATGAGGGGATGGGCATTGTGACCTaGCCAATGGAGAAGGGCATC +
Preference number: 4 (lower is better)
Translates to: KHHLPYNLHPPKELQDEGMGIVT*PMEKGI
Trigger: GATGCCCTTCTCCATTGGGCAGGTCACAATGCCCAT...CCCCTCATCTTGCAATTCCTTTGGGGGATGCAGATTGTAGGGAAGATGATGTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000300650.9
ENST00000530849.1
ENST00000531452.5
CDS-3UTR GCA 90 bp AGAAGCTTGTGGGGTACATGGAGGAATTGGGACCTGGTTATGTTGTTATTCTCGATGGGCATTGTGACCTaGCCAATGGAGAAGGGCATC +
Preference number: 4 (lower is better)
Translates to: RSLWGTWRNWDLVMLLFSMGIVT*PMEKGI
Trigger: GATGCCCTTCTCCATTGGGCAGGTCACAATGCCCAT...CGAGAATAACAACATAACCAGGTCCCAATTCCTCCATGTACCCCACAAGCTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300650.9
ENST00000530849.1
CDS-3UTR GCA 90 bp AAACATCATCTTCCCTACAATCTGCATCCCCCAAAGGAATTGCAAGATGAGGGGTCATCTGGGCCTTATTaGACTGTGGGAACCGGGTCA +
Preference number: 4 (lower is better)
Translates to: KHHLPYNLHPPKELQDEGSSGPY*TVGTGS
Trigger: TGACCCGGTTCCCACAGTGCAATAAGGCCCAGATGA...CCCCTCATCTTGCAATTCCTTTGGGGGATGCAGATTGTAGGGAAGATGATGTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000300650.9
ENST00000530849.1
ENST00000531452.5
CDS-3UTR GCA 90 bp AGAAGCTTGTGGGGTACATGGAGGAATTGGGACCTGGTTATGTTGTTATTCTCGTCATCTGGGCCTTATTaGACTGTGGGAACCGGGTCA +
Preference number: 4 (lower is better)
Translates to: RSLWGTWRNWDLVMLLFSSSGPY*TVGTGS
Trigger: TGACCCGGTTCCCACAGTGCAATAAGGCCCAGATGA...CGAGAATAACAACATAACCAGGTCCCAATTCCTCCATGTACCCCACAAGCTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300650.9
ENST00000530849.1
CDS-3UTR GCA 90 bp AGAAGCTTGTGGGGTACATGGAGGAATTGGGACCTGGTTATGTTGTTATTCTCGAAGTGGCTGAGTACTTaGTGCCACCCGCTCATGTTC +
Preference number: 4 (lower is better)
Translates to: RSLWGTWRNWDLVMLLFSKWLST*CHPLMF
Trigger: GAACATGAGCGGGTGGCAGCAAGTACTCAGCCACTT...CGAGAATAACAACATAACCAGGTCCCAATTCCTCCATGTACCCCACAAGCTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300650.9
CDS-3UTR CCA 90 bp AAACATCATCTTCCCTACAATCTGCATCCCCCAAAGGAATTGCAAGATGAGGGGCCTCTCCTGCTGTGCTaGCCACATCCTTCAAATCAG +
Preference number: 4 (lower is better)
Translates to: KHHLPYNLHPPKELQDEGPLLLC*PHPSNQ
Trigger: CTGATTTGAAGGATGTGGCCAGCACAGCAGGAGAGG...CCCCTCATCTTGCAATTCCTTTGGGGGATGCAGATTGTAGGGAAGATGATGTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300650.9
ENST00000531452.5
CDS-3UTR CCA 90 bp AGGCTTTCGGTAAGCAAGGCATCTGGTTGGACAGTGGGTGAGCACCAGGCTTTATACCTTCCTTTAGGATaGAGGTTTGTGGGGATTTCT +
Preference number: 4 (lower is better)
Translates to: RLSVSKASGWTVGEHQALYLPLG*RFVGIS
Trigger: AGAAATCCCCACAAACCTCCATCCTAAAGGAAGGTA...TAAAGCCTGGTGCTCACCCACTGTCCAACCAGATGCCTTGCTTACCGAAAGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300650.9
ENST00000531452.5
CDS-3UTR CCA 90 bp AGTCTCATTTTATCCATTTGGAGTAGAGTGGCTAAAACAATACTGAGGCTTCTGGGCATGTGTGGACCGTaGGGGCTGACAAGGGAACCC +
Preference number: 4 (lower is better)
Translates to: SLILSIWSRVAKTILRLLGMCGP*GLTREP
Trigger: GGGTTCCCTTGTCAGCCCCCACGGTCCACACATGCC...CAGAAGCCTCAGTATTGTTTTAGCCACTCTACTCCAAATGGATAAAATGAGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000300650.9
ENST00000530849.1
ENST00000531452.5
CDS-3UTR CCA 90 bp CTAGGTGGTTTTTATATTGTATTTGAAAACAGCCCTGGGCAGGGATATCATAATGGCAGGGGGCATGTGTaGACCGTGGGGGCTGACAAG +
Preference number: 4 (lower is better)
Translates to: LGGFYIVFENSPGQGYHNGRGHV*TVGADK
Trigger: CTTGTCAGCCCCCACGGTCCACACATGCCCCCTGCC...ATTATGATATCCCTGCCCAGGGCTGTTTTCAAATACAATATAAAAACCACCTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000300650.9
ENST00000530849.1
ENST00000531452.5
CDS-3UTR CCA 90 bp AAATATAGAGTTTTAGAAATCTTGAACCCGCGCTTCCTGTTCACATCAGTTTCTAACACCGCCCAAGCCTaGGGGAGGTGGGATGGAGGC +
Preference number: 4 (lower is better)
Translates to: KYRVLEILNPRFLFTSVSNTAQA*GRWDGG
Trigger: GCCTCCATCCCACCTCCCCCAGGCTTGGGCGGTGTT...AGAAACTGATGTGAACAGGAAGCGCGGGTTCAAGATTTCTAAAACTCTATATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300650.9
ENST00000530849.1
ENST00000531452.5
CDS-3UTR TCA 90 bp AACATCATCTTCCCTACAATCTGCATCCCCCAAAGGAATTGCAAGATGAGGGGGAATTGCACTTGGAGCTaGTTCTCCACTTGCCTCTGT +
Preference number: 4 (lower is better)
Translates to: NIIFPTICIPQRNCKMRGNCTWS*FSTCLC
Trigger: ACAGAGGCAAGTGGAGAATCAGCTCCAAGTGCAATT...CCCCCTCATCTTGCAATTCCTTTGGGGGATGCAGATTGTAGGGAAGATGATGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000300650.9
ENST00000530849.1
ENST00000531452.5
CDS-3UTR TCA 90 bp CCCTACAATCTGCATCCCCCAAAGGAATTGCAAGATGAGGGGGAACAGACTGTTCGCCATCCTGATTCTTaGGTCTATCCAGTTCCATTT +
Preference number: 4 (lower is better)
Translates to: PYNLHPPKELQDEGEQTVRHPDS*VYPVPF
Trigger: AAATGGAACTGGATAGACTCAAGAATCAGGATGGCG...AACAGTCTGTTCCCCCTCATCTTGCAATTCCTTTGGGGGATGCAGATTGTAGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000300650.9
ENST00000530849.1
ENST00000531452.5
CDS-3UTR TCA 90 bp AGGCTTTCGGTAAGCAAGGCATCTGGTTGGACAGTGGGTGAGCACCAGGCTTTATTTATTTCGCCATCCTaGTTCTTGAGTCTATCCAGT +
Preference number: 4 (lower is better)
Translates to: RLSVSKASGWTVGEHQALFISPS*FLSLSS
Trigger: ACTGGATAGACTCAAGAATCAGGATGGCGAAATAAA...TAAAGCCTGGTGCTCACCCACTGTCCAACCAGATGCCTTGCTTACCGAAAGCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300650.9
ENST00000530849.1
ENST00000531452.5
CDS-3UTR GCA 90 bp CAGAAGCTTGTGGGGTACATGGAGGAATTGGGACCTGGTTATGTTGTTATTCTCGTGCAGAGTCTTTGGTaGTTAGACCATCTGGGAGAC +
Preference number: 4 (lower is better)
Translates to: QKLVGYMEELGPGYVVILVQSLW*LDHLGD
Trigger: GTCTCCCAGATGGTCTAAGCACCAAAGACTCTGCAC...GAGAATAACAACATAACCAGGTCCCAATTCCTCCATGTACCCCACAAGCTTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300650.9
ENST00000530849.1
CDS-3UTR GCA 90 bp AGTCTCATTTTATCCATTTGGAGTAGAGTGGCTAAAACAATACTGAGGCTTCTGGTCCCCCTCCTCTCCTaGTGTGCTGGCCACATCCTT +
Preference number: 4 (lower is better)
Translates to: SLILSIWSRVAKTILRLLVPLLS*CAGHIL
Trigger: AAGGATGTGGCCAGCACAGCAGGAGAGGAGGGGGAC...CAGAAGCCTCAGTATTGTTTTAGCCACTCTACTCCAAATGGATAAAATGAGACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000300650.9
ENST00000531452.5
CDS-3UTR GCA 90 bp AAACATCATCTTCCCTACAATCTGCATCCCCCAAAGGAATTGCAAGATGAGGGGTCCTTCAACCCCATTTaGTGGAGACACTACAGGTCG +
Preference number: 4 (lower is better)
Translates to: KHHLPYNLHPPKELQDEGSFNPI*WRHYRS
Trigger: CGACCTGTAGTGTCTCCAGCAAATGGGGTTGAAGGA...CCCCTCATCTTGCAATTCCTTTGGGGGATGCAGATTGTAGGGAAGATGATGTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000300650.9
ENST00000531452.5
CDS-3UTR GCA 90 bp TTCCCTACAATCTGCATCCCCCAAAGGAATTGCAAGATGAGGGGGAACAGACTGTCAGCTTTCAGATCCTaGTCCTTCTGCAAAAACTCC +
Preference number: 4 (lower is better)
Translates to: FPTICIPQRNCKMRGNRLSAFRS*SFCKNS
Trigger: GGAGTTTTTGCAGAAGGAGCAGGATCTGAAAGCTGA...CAGTCTGTTCCCCCTCATCTTGCAATTCCTTTGGGGGATGCAGATTGTAGGGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000300650.9
ENST00000530849.1
ENST00000531452.5
CDS-3UTR GCA 90 bp CCCTACAATCTGCATCCCCCAAAGGAATTGCAAGATGAGGGGGAACAGACTGTTTCAGCTTTCAGATCCTaGTCCTTCTGCAAAAACTCC +
Preference number: 4 (lower is better)
Translates to: PYNLHPPKELQDEGEQTVSAFRS*SFCKNS
Trigger: GGAGTTTTTGCAGAAGGAGCAGGATCTGAAAGCTGA...AACAGTCTGTTCCCCCTCATCTTGCAATTCCTTTGGGGGATGCAGATTGTAGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000300650.9
ENST00000530849.1
ENST00000531452.5
CDS-3UTR GCA 90 bp AGGCTTTCGGTAAGCAAGGCATCTGGTTGGACAGTGGGTGAGCACCAGGCTTTAAGTAAGGTGCAATTCTaGCTCTTTTTCTGCTTCTTC +
Preference number: 4 (lower is better)
Translates to: RLSVSKASGWTVGEHQALSKVQF*LFFCFF
Trigger: GAAGAAGCAGAAAAAGAGGCAGAATTGCACCTTACT...TAAAGCCTGGTGCTCACCCACTGTCCAACCAGATGCCTTGCTTACCGAAAGCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000300650.9
ENST00000530849.1
ENST00000531452.5
CDS-3UTR GCA 90 bp ATTTTATCCATTTGGAGTAGAGTGGCTAAAACAATACTGAGGCTTCTGGAGGCTAGCCAGGGCTATTTCTaGCATGGGAGCCAGGAAGGG +
Preference number: 4 (lower is better)
Translates to: ILSIWSRVAKTILRLLEASQGYF*HGSQEG
Trigger: CCCTTCCTGGCTCCCATGGCAGAAATAGCCCTGGCT...AGCCTCCAGAAGCCTCAGTATTGTTTTAGCCACTCTACTCCAAATGGATAAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300650.9
ENST00000530849.1
ENST00000531452.5
CDS-3UTR GCA 90 bp CTCATTTTATCCATTTGGAGTAGAGTGGCTAAAACAATACTGAGGCTTCTGGAGCTCCATGGTCAGGCCTaGCATGGTGGTACGTGCTGT +
Preference number: 4 (lower is better)
Translates to: LILSIWSRVAKTILRLLELHGQA*HGGTCC
Trigger: ACAGCACGTACCACCATGGCAGGCCTGACCATGGAG...CTCCAGAAGCCTCAGTATTGTTTTAGCCACTCTACTCCAAATGGATAAAATGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300650.9
ENST00000530849.1
ENST00000531452.5
CDS-3UTR GCA 90 bp GTATTTGAAAACAGCCCTGGGCAGGGATATCATAATTTCAAGGCCAAACTAAACGTACACGCCATTGGATaGAGCTCACTGGGCTGGACG +
Preference number: 4 (lower is better)
Translates to: VFENSPGQGYHNFKAKLNVHAIG*SSLGWT
Trigger: CGTCCAGCCCAGTGAGCTGCATCCAATGGCGTGTAC...GTTTAGTTTGGCCTTGAAATTATGATATCCCTGCCCAGGGCTGTTTTCAAATAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300650.9
ENST00000530849.1
ENST00000531452.5
CDS-3UTR GCA 90 bp CCCTACAATCTGCATCCCCCAAAGGAATTGCAAGATGAGGGGGAACAGACTGTTTTGATACACTCCTTGTaGAATACATGGGTACACGCC +
Preference number: 4 (lower is better)
Translates to: PYNLHPPKELQDEGEQTVLIHSL*NTWVHA
Trigger: GGCGTGTACCCATGTATTGCACAAGGAGTGTATCAA...AACAGTCTGTTCCCCCTCATCTTGCAATTCCTTTGGGGGATGCAGATTGTAGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000300650.9
ENST00000530849.1
ENST00000531452.5
CDS-3UTR GCA 90 bp CCCTACAATCTGCATCCCCCAAAGGAATTGCAAGATGAGGGGGAACAGACTGTTATCTTCCCTACAATCTaGATCCCCCAAAGGAATTGC +
Preference number: 4 (lower is better)
Translates to: PYNLHPPKELQDEGEQTVIFPTI*IPQRNC
Trigger: GCAATTCCTTTGGGGGATGCAGATTGTAGGGAAGAT...AACAGTCTGTTCCCCCTCATCTTGCAATTCCTTTGGGGGATGCAGATTGTAGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000300650.9
ENST00000530849.1
ENST00000531452.5
CDS-3UTR CCA 90 bp CTCATTTTATCCATTTGGAGTAGAGTGGCTAAAACAATACTGAGGCTTCTGGAGGAGGACTGGGGGCATTaGCCACAACACCAGCAACCT +
Preference number: 4 (lower is better)
Translates to: LILSIWSRVAKTILRLLEEDWGH*PQHQQP
Trigger: AGGTTGCTGGTGTTGTGGCCAATGCCCCCAGTCCTC...CTCCAGAAGCCTCAGTATTGTTTTAGCCACTCTACTCCAAATGGATAAAATGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000300650.9
ENST00000530849.1
ENST00000531452.5
CDS-3UTR CCA 90 bp AACATCATCTTCCCTACAATCTGCATCCCCCAAAGGAATTGCAAGATGAGGGGGTCTGTGCAGAGTCTTTaGTGCTTAGACCATCTGGGA +
Preference number: 4 (lower is better)
Translates to: NIIFPTICIPQRNCKMRGSVQSL*CLDHLG
Trigger: TCCCAGATGGTCTAAGCACCAAAGACTCTGCACAGA...CCCCCTCATCTTGCAATTCCTTTGGGGGATGCAGATTGTAGGGAAGATGATGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000300650.9
ENST00000530849.1
ENST00000531452.5
CDS-3UTR CCA 90 bp AGGCTTTCGGTAAGCAAGGCATCTGGTTGGACAGTGGGTGAGCACCAGGCTTTAAAAGACAAAGGGCTGTaGCTATCAAGTTTTCTCCTA +
Preference number: 4 (lower is better)
Translates to: RLSVSKASGWTVGEHQALKDKGL*LSSFLL
Trigger: TAGGAGAAAACTTGATAGCCACAGCCCTTTGTCTTT...TAAAGCCTGGTGCTCACCCACTGTCCAACCAGATGCCTTGCTTACCGAAAGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300650.9
ENST00000531452.5
CDS-3UTR CCA 90 bp AAACATCATCTTCCCTACAATCTGCATCCCCCAAAGGAATTGCAAGATGAGGGGGCAAGCTGCTTAGTATaGCACCCTGCCTTAAGAGAC +
Preference number: 4 (lower is better)
Translates to: KHHLPYNLHPPKELQDEGASCLV*HPALRD
Trigger: GTCTCTTAAGGCAGGGTGCCATACTAAGCAGCTTGC...CCCCTCATCTTGCAATTCCTTTGGGGGATGCAGATTGTAGGGAAGATGATGTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000300650.9
ENST00000531452.5
CDS-3UTR CCA 90 bp ATTTTATCCATTTGGAGTAGAGTGGCTAAAACAATACTGAGGCTTCTGGAGGCTGGCAGGGTTCAGGATTaGGAAAGACAAGGAGCGGGG +
Preference number: 4 (lower is better)
Translates to: ILSIWSRVAKTILRLLEAGRVQD*ERQGAG
Trigger: CCCCGCTCCTTGTCTTTCCCAATCCTGAACCCTGCC...AGCCTCCAGAAGCCTCAGTATTGTTTTAGCCACTCTACTCCAAATGGATAAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300650.9
ENST00000530849.1
ENST00000531452.5
CDS-3UTR CCA 90 bp AGAGTCACAGCTTTCCCAGGTATAAAACCTAAAATTAAGAAGTACAATAAGCAGAACACCGCCCAAGCCTaGGGGAGGTGGGATGGAGGC +
Preference number: 4 (lower is better)
Translates to: RVTAFPGIKPKIKKYNKQNTAQA*GRWDGG
Trigger: GCCTCCATCCCACCTCCCCCAGGCTTGGGCGGTGTT...CTGCTTATTGTACTTCTTAATTTTAGGTTTTATACCTGGGAAAGCTGTGACTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300650.9
ENST00000530849.1
CDS-3UTR CCA 90 bp TTCCCTACAATCTGCATCCCCCAAAGGAATTGCAAGATGAGGGGGAACAGACTGTCTGCTGAAGAATGTTaGTCATCTGGGCCTTATTGC +
Preference number: 4 (lower is better)
Translates to: FPTICIPQRNCKMRGNRLSAEEC*SSGPYC
Trigger: GCAATAAGGCCCAGATGACCAACATTCTTCAGCAGA...CAGTCTGTTCCCCCTCATCTTGCAATTCCTTTGGGGGATGCAGATTGTAGGGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000300650.9
ENST00000530849.1
ENST00000531452.5
CDS-3UTR CCA 90 bp GTATTTGAAAACAGCCCTGGGCAGGGATATCATAATTTCAAGGCCAAACTAAACCCGGATGCGACCAAGTaGCTGAGTACTTGCTGCCAC +
Preference number: 4 (lower is better)
Translates to: VFENSPGQGYHNFKAKLNPDATK*LSTCCH
Trigger: GTGGCAGCAAGTACTCAGCCACTTGGTCGCATCCGG...GTTTAGTTTGGCCTTGAAATTATGATATCCCTGCCCAGGGCTGTTTTCAAATAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300650.9
ENST00000531452.5
CDS-3UTR CCA 90 bp CTCATTTTATCCATTTGGAGTAGAGTGGCTAAAACAATACTGAGGCTTCTGGAGACTGATTTGGGCCAGTaGAGCAGGGAACAAGGCCCG +
Preference number: 4 (lower is better)
Translates to: LILSIWSRVAKTILRLLETDLGQ*SREQGP
Trigger: CGGGCCTTGTTCCCTGCTCCACTGGCCCAAATCAGT...CTCCAGAAGCCTCAGTATTGTTTTAGCCACTCTACTCCAAATGGATAAAATGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300650.9
ENST00000531452.5
CDS-3UTR CCA 90 bp AAACATCATCTTCCCTACAATCTGCATCCCCCAAAGGAATTGCAAGATGAGGGGGTGGACAGAAGCTTGTaGGGTACATGGAGGAATTGG +
Preference number: 4 (lower is better)
Translates to: KHHLPYNLHPPKELQDEGVDRSL*GTWRNW
Trigger: CCAATTCCTCCATGTACCCCACAAGCTTCTGTCCAC...CCCCTCATCTTGCAATTCCTTTGGGGGATGCAGATTGTAGGGAAGATGATGTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000300650.9
ENST00000530849.1
CDS-3UTR TCA 90 bp AAACATCATCTTCCCTACAATCTGCATCCCCCAAAGGAATTGCAAGATGAGGGGACCAGGATTCTGCTCTaGGTGCTCCAAATGGACATT +
Preference number: 4 (lower is better)
Translates to: KHHLPYNLHPPKELQDEGTRILL*VLQMDI
Trigger: AATGTCCATTTGGAGCACTCAGAGCAGAATCCTGGT...CCCCTCATCTTGCAATTCCTTTGGGGGATGCAGATTGTAGGGAAGATGATGTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300650.9
ENST00000531452.5
CDS-3UTR TCA 90 bp AGAGTTTTAGAAATCTTGAACCCGCGCTTCCTGTTCACATCAGTTTCTCTTCTTGTGGGAGTAGGGATTTaGGGAAGGCTGCTCAGCTTG +
Preference number: 4 (lower is better)
Translates to: RVLEILNPRFLFTSVSLLVGVGI*GRLLSL
Trigger: CAAGCTGAGCAGCCTTCCTCAAATCCCTACTCCCAC...AAGAAGAGAAACTGATGTGAACAGGAAGCGCGGGTTCAAGATTTCTAAAACTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300650.9
ENST00000530849.1
ENST00000531452.5
CDS-3UTR TCA 90 bp AGAAGCTTGTGGGGTACATGGAGGAATTGGGACCTGGTTATGTTGTTATTCTCGTGGTACGTGCTGTCTTaGTCTGCTGAAGAATGTTGG +
Preference number: 4 (lower is better)
Translates to: RSLWGTWRNWDLVMLLFSWYVLS*SAEECW
Trigger: CCAACATTCTTCAGCAGATCAAGACAGCACGTACCA...CGAGAATAACAACATAACCAGGTCCCAATTCCTCCATGTACCCCACAAGCTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300650.9
ENST00000530849.1
CDS-3UTR TCA 90 bp AGAAGCTTGTGGGGTACATGGAGGAATTGGGACCTGGTTATGTTGTTATTCTCGAGACCTTCCAGGATATaGAACTTGGGCAGAAGGCAA +
Preference number: 4 (lower is better)
Translates to: RSLWGTWRNWDLVMLLFSRPSRI*NLGRRQ
Trigger: TTGCCTTCTGCCCAAGTTTCATATCCTGGAAGGTCT...CGAGAATAACAACATAACCAGGTCCCAATTCCTCCATGTACCCCACAAGCTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300650.9
CDS-3UTR TCA 90 bp AACATCATCTTCCCTACAATCTGCATCCCCCAAAGGAATTGCAAGATGAGGGGGTCTGGGCCCAGAATTTaGTACACTCCTTGTGCAATA +
Preference number: 4 (lower is better)
Translates to: NIIFPTICIPQRNCKMRGSGPRI*YTPCAI
Trigger: TATTGCACAAGGAGTGTATCAAATTCTGGGCCCAGA...CCCCCTCATCTTGCAATTCCTTTGGGGGATGCAGATTGTAGGGAAGATGATGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000300650.9
ENST00000530849.1
ENST00000531452.5
CDS-3UTR TCA 90 bp AACATCATCTTCCCTACAATCTGCATCCCCCAAAGGAATTGCAAGATGAGGGGGAAATGGACTAGAGGCTaGGCCAAACCAAAGCAGAAT +
Preference number: 4 (lower is better)
Translates to: NIIFPTICIPQRNCKMRGKWTRG*AKPKQN
Trigger: ATTCTGCTTTGGTTTGGCTCAGCCTCTAGTCCATTT...CCCCCTCATCTTGCAATTCCTTTGGGGGATGCAGATTGTAGGGAAGATGATGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000300650.9
ENST00000530849.1
ENST00000531452.5
CDS-3UTR GCA 90 bp CTCATTTTATCCATTTGGAGTAGAGTGGCTAAAACAATACTGAGGCTTCTGGAGAGCAACCTCAGACGCTaGCATTATGCTCTGAGCGGG +
Preference number: 4 (lower is better)
Translates to: LILSIWSRVAKTILRLLESNLRR*HYALSG
Trigger: CCCGCTCAGAGCATAATGGCAGCGTCTGAGGTTGCT...CTCCAGAAGCCTCAGTATTGTTTTAGCCACTCTACTCCAAATGGATAAAATGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300650.9
CDS-3UTR GCA 90 bp AGAGTTTTAGAAATCTTGAACCCGCGCTTCCTGTTCACATCAGTTTCTCTTCTTTTCCTGGAGGCAAGCTaGTTAGTATGGCACCCTGCC +
Preference number: 4 (lower is better)
Translates to: RVLEILNPRFLFTSVSLLFLEAS*LVWHPA
Trigger: GGCAGGGTGCCATACTAAGCAGCTTGCCTCCAGGAA...AAGAAGAGAAACTGATGTGAACAGGAAGCGCGGGTTCAAGATTTCTAAAACTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300650.9
ENST00000531452.5
CDS-3UTR GCA 90 bp AGTCTCATTTTATCCATTTGGAGTAGAGTGGCTAAAACAATACTGAGGCTTCTGCAAGGAGCGGGGATCTaGACTGGGCATAACCATGGG +
Preference number: 4 (lower is better)
Translates to: SLILSIWSRVAKTILRLLQGAGI*TGHNHG
Trigger: CCCATGGTTATGCCCAGTGCAGATCCCCGCTCCTTG...CAGAAGCCTCAGTATTGTTTTAGCCACTCTACTCCAAATGGATAAAATGAGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000300650.9
ENST00000530849.1
ENST00000531452.5
CDS-3UTR GCA 90 bp AAACATCATCTTCCCTACAATCTGCATCCCCCAAAGGAATTGCAAGATGAGGGGATGTTCTGCCAGTCGTaGAGCAACCAACTGGATAAG +
Preference number: 4 (lower is better)
Translates to: KHHLPYNLHPPKELQDEGMFCQS*SNQLDK
Trigger: CTTATCCAGTTGGTTGCTGCACGACTGGCAGAACAT...CCCCTCATCTTGCAATTCCTTTGGGGGATGCAGATTGTAGGGAAGATGATGTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000300650.9
ENST00000530849.1
ENST00000531452.5
CDS-3UTR GCA 90 bp GTATTTGAAAACAGCCCTGGGCAGGGATATCATAATTTCAAGGCCAAACTAAACCACCCGCTCATGTTCTaGCAGTCGTGCAGCAACCAA +
Preference number: 4 (lower is better)
Translates to: VFENSPGQGYHNFKAKLNHPLMF*QSCSNQ
Trigger: TTGGTTGCTGCACGACTGGCAGAACATGAGCGGGTG...GTTTAGTTTGGCCTTGAAATTATGATATCCCTGCCCAGGGCTGTTTTCAAATAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300650.9
ENST00000530849.1
ENST00000531452.5
CDS-3UTR CCA 90 bp AGTCTCATTTTATCCATTTGGAGTAGAGTGGCTAAAACAATACTGAGGCTTCTGGAGGACTGGGGGCATTaGCCACAACACCAGCAACCT +
Preference number: 4 (lower is better)
Translates to: SLILSIWSRVAKTILRLLEDWGH*PQHQQP
Trigger: AGGTTGCTGGTGTTGTGGCCAATGCCCCCAGTCCTC...CAGAAGCCTCAGTATTGTTTTAGCCACTCTACTCCAAATGGATAAAATGAGACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000300650.9
ENST00000530849.1
ENST00000531452.5
CDS-3UTR CCA 90 bp AGAGTCACAGCTTTCCCAGGTATAAAACCTAAAATTAAGAAGTACAATAAGCAGGGCATGTGTGGACCGTaGGGGCTGACAAGGGAACCC +
Preference number: 4 (lower is better)
Translates to: RVTAFPGIKPKIKKYNKQGMCGP*GLTREP
Trigger: GGGTTCCCTTGTCAGCCCCCACGGTCCACACATGCC...CTGCTTATTGTACTTCTTAATTTTAGGTTTTATACCTGGGAAAGCTGTGACTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300650.9
ENST00000530849.1
CDS-3UTR CCA 90 bp CTCATTTTATCCATTTGGAGTAGAGTGGCTAAAACAATACTGAGGCTTCTGGAGCTCCAGTTTGTCTACTaGTTGGGGCCGGGGAGTTTC +
Preference number: 4 (lower is better)
Translates to: LILSIWSRVAKTILRLLELQFVY*LGPGSF
Trigger: GAAACTCCCCGGCCCCAACCAGTAGACAAACTGGAG...CTCCAGAAGCCTCAGTATTGTTTTAGCCACTCTACTCCAAATGGATAAAATGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000300650.9
ENST00000530849.1
ENST00000531452.5
CDS-3UTR CCA 90 bp AGAGTTTTAGAAATCTTGAACCCGCGCTTCCTGTTCACATCAGTTTCTCTTCTTCTCCAGTTTGTCTACTaGTTGGGGCCGGGGAGTTTC +
Preference number: 4 (lower is better)
Translates to: RVLEILNPRFLFTSVSLLLQFVY*LGPGSF
Trigger: GAAACTCCCCGGCCCCAACCAGTAGACAAACTGGAG...AAGAAGAGAAACTGATGTGAACAGGAAGCGCGGGTTCAAGATTTCTAAAACTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000300650.9
ENST00000530849.1
ENST00000531452.5
CDS-3UTR CCA 90 bp GTATTTGAAAACAGCCCTGGGCAGGGATATCATAATTTCAAGGCCAAACTAAACGGCCTTATTGCACTGTaGGAACCGGGTCAGCAGCTT +
Preference number: 4 (lower is better)
Translates to: VFENSPGQGYHNFKAKLNGLIAL*EPGQQL
Trigger: AAGCTGCTGACCCGGTTCCCACAGTGCAATAAGGCC...GTTTAGTTTGGCCTTGAAATTATGATATCCCTGCCCAGGGCTGTTTTCAAATAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300650.9
ENST00000530849.1
ENST00000531452.5
CDS-3UTR CCA 90 bp AGAAGCTTGTGGGGTACATGGAGGAATTGGGACCTGGTTATGTTGTTATTCTCGAGAAGGCAAGAACATTaGGGTACTGATTTGGGCCAG +
Preference number: 4 (lower is better)
Translates to: RSLWGTWRNWDLVMLLFSRRQEH*GTDLGQ
Trigger: CTGGCCCAAATCAGTACCCCAATGTTCTTGCCTTCT...CGAGAATAACAACATAACCAGGTCCCAATTCCTCCATGTACCCCACAAGCTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300650.9
CDS-3UTR CCA 90 bp AAACATCATCTTCCCTACAATCTGCATCCCCCAAAGGAATTGCAAGATGAGGGGAGAAGGCAAGAACATTaGGGTACTGATTTGGGCCAG +
Preference number: 4 (lower is better)
Translates to: KHHLPYNLHPPKELQDEGRRQEH*GTDLGQ
Trigger: CTGGCCCAAATCAGTACCCCAATGTTCTTGCCTTCT...CCCCTCATCTTGCAATTCCTTTGGGGGATGCAGATTGTAGGGAAGATGATGTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300650.9
ENST00000531452.5
CDS-3UTR CCA 90 bp ATTTTATCCATTTGGAGTAGAGTGGCTAAAACAATACTGAGGCTTCTGGAGGCTTTGGATGCAGCTCACTaGGCTGGACGAGTTTCTGGC +
Preference number: 4 (lower is better)
Translates to: ILSIWSRVAKTILRLLEALDAAH*AGRVSG
Trigger: GCCAGAAACTCGTCCAGCCCAGTGAGCTGCATCCAA...AGCCTCCAGAAGCCTCAGTATTGTTTTAGCCACTCTACTCCAAATGGATAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300650.9
ENST00000530849.1
ENST00000531452.5
CDS-3UTR CCA 90 bp AGAGTTTTAGAAATCTTGAACCCGCGCTTCCTGTTCACATCAGTTTCTCTTCTTATGGGTACACGCCATTaGATGCAGCTCACTGGGCTG +
Preference number: 4 (lower is better)
Translates to: RVLEILNPRFLFTSVSLLMGTRH*MQLTGL
Trigger: CAGCCCAGTGAGCTGCATCCAATGGCGTGTACCCAT...AAGAAGAGAAACTGATGTGAACAGGAAGCGCGGGTTCAAGATTTCTAAAACTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300650.9
ENST00000530849.1
ENST00000531452.5
CDS-3UTR CCA 90 bp CTCATTTTATCCATTTGGAGTAGAGTGGCTAAAACAATACTGAGGCTTCTGGAGATGGGTACACGCCATTaGATGCAGCTCACTGGGCTG +
Preference number: 4 (lower is better)
Translates to: LILSIWSRVAKTILRLLEMGTRH*MQLTGL
Trigger: CAGCCCAGTGAGCTGCATCCAATGGCGTGTACCCAT...CTCCAGAAGCCTCAGTATTGTTTTAGCCACTCTACTCCAAATGGATAAAATGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300650.9
ENST00000530849.1
ENST00000531452.5
CDS-3UTR CCA 90 bp CAGAAGCTTGTGGGGTACATGGAGGAATTGGGACCTGGTTATGTTGTTATTCTCTCCTTGTGCAATACATaGGTACACGCCATTGGATGC +
Preference number: 4 (lower is better)
Translates to: QKLVGYMEELGPGYVVILSLCNT*VHAIGC
Trigger: GCATCCAATGGCGTGTACCCATGTATTGCACAAGGA...GAGAATAACAACATAACCAGGTCCCAATTCCTCCATGTACCCCACAAGCTTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300650.9
ENST00000530849.1
CDS-3UTR CCA 90 bp GTATTTGAAAACAGCCCTGGGCAGGGATATCATAATTTCAAGGCCAAACTAAACAGCAAGGCATCTGGTTaGACAGTGGGTGAGCACCAG +
Preference number: 4 (lower is better)
Translates to: VFENSPGQGYHNFKAKLNSKASG*TVGEHQ
Trigger: CTGGTGCTCACCCACTGTCCAACCAGATGCCTTGCT...GTTTAGTTTGGCCTTGAAATTATGATATCCCTGCCCAGGGCTGTTTTCAAATAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300650.9
ENST00000530849.1
ENST00000531452.5
CDS-3UTR CCA 90 bp ATTTTATCCATTTGGAGTAGAGTGGCTAAAACAATACTGAGGCTTCTGGAGGCTAGCAAGGCATCTGGTTaGACAGTGGGTGAGCACCAG +
Preference number: 4 (lower is better)
Translates to: ILSIWSRVAKTILRLLEASKASG*TVGEHQ
Trigger: CTGGTGCTCACCCACTGTCCAACCAGATGCCTTGCT...AGCCTCCAGAAGCCTCAGTATTGTTTTAGCCACTCTACTCCAAATGGATAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300650.9
ENST00000530849.1
ENST00000531452.5
CDS-3UTR CCA 90 bp CAGAAGCTTGTGGGGTACATGGAGGAATTGGGACCTGGTTATGTTGTTATTCTCGTCCAGAAAATAGGGTaGACAGAAGCTTGTGGGGTA +
Preference number: 4 (lower is better)
Translates to: QKLVGYMEELGPGYVVILVQKIG*TEACGV
Trigger: TACCCCACAAGCTTCTGTCCACCCTATTTTCTGGAC...GAGAATAACAACATAACCAGGTCCCAATTCCTCCATGTACCCCACAAGCTTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300650.9
ENST00000530849.1
CDS-3UTR TCA 90 bp TTCCCTACAATCTGCATCCCCCAAAGGAATTGCAAGATGAGGGGGAACAGACTGTTTATTTCGCCATCCTaGTTCTTGAGTCTATCCAGT +
Preference number: 4 (lower is better)
Translates to: FPTICIPQRNCKMRGNRLFISPS*FLSLSS
Trigger: ACTGGATAGACTCAAGAATCAGGATGGCGAAATAAA...CAGTCTGTTCCCCCTCATCTTGCAATTCCTTTGGGGGATGCAGATTGTAGGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000300650.9
ENST00000530849.1
ENST00000531452.5
CDS-3UTR TCA 90 bp AGTCTCATTTTATCCATTTGGAGTAGAGTGGCTAAAACAATACTGAGGCTTCTGGTGGGAGTAGGGATTTaGGGAAGGCTGCTCAGCTTG +
Preference number: 4 (lower is better)
Translates to: SLILSIWSRVAKTILRLLVGVGI*GRLLSL
Trigger: CAAGCTGAGCAGCCTTCCTCAAATCCCTACTCCCAC...CAGAAGCCTCAGTATTGTTTTAGCCACTCTACTCCAAATGGATAAAATGAGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300650.9
ENST00000530849.1
ENST00000531452.5
CDS-3UTR TCA 90 bp AGAGTTTTAGAAATCTTGAACCCGCGCTTCCTGTTCACATCAGTTTCTCTTCTTAGAACATTGGGGTACTaGTTTGGGCCAGTGGAGCAG +
Preference number: 4 (lower is better)
Translates to: RVLEILNPRFLFTSVSLLRTLGY*FGPVEQ
Trigger: CTGCTCCACTGGCCCAAATCAGTACCCCAATGTTCT...AAGAAGAGAAACTGATGTGAACAGGAAGCGCGGGTTCAAGATTTCTAAAACTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300650.9
ENST00000531452.5
CDS-3UTR TCA 90 bp CTCATTTTATCCATTTGGAGTAGAGTGGCTAAAACAATACTGAGGCTTCTGGAGCTAGGAGACCAGAAGTaGATGGGAAAGGGTGAGGAC +
Preference number: 4 (lower is better)
Translates to: LILSIWSRVAKTILRLLELGDQK*MGKGED
Trigger: GTCCTCACCCTTTCCCATTCACTTCTGGTCTCCTAG...CTCCAGAAGCCTCAGTATTGTTTTAGCCACTCTACTCCAAATGGATAAAATGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300650.9
ENST00000530849.1
CDS-3UTR GCA 90 bp GTATTTGAAAACAGCCCTGGGCAGGGATATCATAATTTCAAGGCCAAACTAAACCCTCCTCTCCTGCTGTaGTGGCCACATCCTTCAAAT +
Preference number: 4 (lower is better)
Translates to: VFENSPGQGYHNFKAKLNPPLLL*WPHPSN
Trigger: ATTTGAAGGATGTGGCCAGCACAGCAGGAGAGGAGG...GTTTAGTTTGGCCTTGAAATTATGATATCCCTGCCCAGGGCTGTTTTCAAATAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300650.9
ENST00000531452.5
CDS-3UTR GCA 90 bp AACATCATCTTCCCTACAATCTGCATCCCCCAAAGGAATTGCAAGATGAGGGGGAGATCCTGCTCCTTCTaGAAAAACTCCTTCTTCTCT +
Preference number: 4 (lower is better)
Translates to: NIIFPTICIPQRNCKMRGRSCSF*KNSFFS
Trigger: AGAGAAGAAGGAGTTTTTGCAGAAGGAGCAGGATCT...CCCCCTCATCTTGCAATTCCTTTGGGGGATGCAGATTGTAGGGAAGATGATGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000300650.9
ENST00000530849.1
ENST00000531452.5
CDS-3UTR GCA 90 bp AGTCTCATTTTATCCATTTGGAGTAGAGTGGCTAAAACAATACTGAGGCTTCTGGGATTTGAGGAAGGCTaGTCAGCTTGGCTCCGTTCC +
Preference number: 4 (lower is better)
Translates to: SLILSIWSRVAKTILRLLGFEEG*SAWLRS
Trigger: GGAACGGAGCCAAGCTGAGCAGCCTTCCTCAAATCC...CAGAAGCCTCAGTATTGTTTTAGCCACTCTACTCCAAATGGATAAAATGAGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300650.9
ENST00000530849.1
ENST00000531452.5
CDS-3UTR GCA 90 bp CTCATTTTATCCATTTGGAGTAGAGTGGCTAAAACAATACTGAGGCTTCTGGAGTCATCTGGGCCTTATTaGACTGTGGGAACCGGGTCA +
Preference number: 4 (lower is better)
Translates to: LILSIWSRVAKTILRLLESSGPY*TVGTGS
Trigger: TGACCCGGTTCCCACAGTGCAATAAGGCCCAGATGA...CTCCAGAAGCCTCAGTATTGTTTTAGCCACTCTACTCCAAATGGATAAAATGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300650.9
ENST00000530849.1
ENST00000531452.5
CDS-3UTR GCA 90 bp CTAGGTGGTTTTTATATTGTATTTGAAAACAGCCCTGGGCAGGGATATCATAATCTCCATGGTCAGGCCTaGCATGGTGGTACGTGCTGT +
Preference number: 4 (lower is better)
Translates to: LGGFYIVFENSPGQGYHNLHGQA*HGGTCC
Trigger: ACAGCACGTACCACCATGGCAGGCCTGACCATGGAG...ATTATGATATCCCTGCCCAGGGCTGTTTTCAAATACAATATAAAAACCACCTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000300650.9
ENST00000530849.1
ENST00000531452.5
CDS-3UTR GCA 90 bp AGTCTCATTTTATCCATTTGGAGTAGAGTGGCTAAAACAATACTGAGGCTTCTGCACCCGCTCATGTTCTaGCAGTCGTGCAGCAACCAA +
Preference number: 4 (lower is better)
Translates to: SLILSIWSRVAKTILRLLHPLMF*QSCSNQ
Trigger: TTGGTTGCTGCACGACTGGCAGAACATGAGCGGGTG...CAGAAGCCTCAGTATTGTTTTAGCCACTCTACTCCAAATGGATAAAATGAGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300650.9
ENST00000530849.1
ENST00000531452.5
CDS-3UTR GCA 90 bp CTAGGTGGTTTTTATATTGTATTTGAAAACAGCCCTGGGCAGGGATATCATAATGGAACAAGGCCCGGATaGGACCAAGTGGCTGAGTAC +
Preference number: 4 (lower is better)
Translates to: LGGFYIVFENSPGQGYHNGTRPG*DQVAEY
Trigger: GTACTCAGCCACTTGGTCGCATCCGGGCCTTGTTCC...ATTATGATATCCCTGCCCAGGGCTGTTTTCAAATACAATATAAAAACCACCTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300650.9
ENST00000531452.5
CDS-3UTR GCA 90 bp AAATATAGAGTTTTAGAAATCTTGAACCCGCGCTTCCTGTTCACATCAGTTTCTATCTCCTCACCCCAGTaGCTGTCTGGAGCTCACCCA +
Preference number: 4 (lower is better)
Translates to: KYRVLEILNPRFLFTSVSISSPQ*LSGAHP
Trigger: TGGGTGAGCTCCAGACAGGCACTGGGGTGAGGAGAT...AGAAACTGATGTGAACAGGAAGCGCGGGTTCAAGATTTCTAAAACTCTATATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300650.9
ENST00000530849.1
CDS-3UTR GCA 90 bp CTAGGTGGTTTTTATATTGTATTTGAAAACAGCCCTGGGCAGGGATATCATAATAGCAACCTCAGACGCTaGCATTATGCTCTCCCGCGC +
Preference number: 4 (lower is better)
Translates to: LGGFYIVFENSPGQGYHNSNLRR*HYALPR
Trigger: GCGCGGGAGAGCATAATGGCAGCGTCTGAGGTTGCT...ATTATGATATCCCTGCCCAGGGCTGTTTTCAAATACAATATAAAAACCACCTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000531452.5
CDS-3UTR CCA 90 bp AAATATAGAGTTTTAGAAATCTTGAACCCGCGCTTCCTGTTCACATCAGTTTCTGAGGACTGGGGGCATTaGCCACAACACCAGCAACCT +
Preference number: 4 (lower is better)
Translates to: KYRVLEILNPRFLFTSVSEDWGH*PQHQQP
Trigger: AGGTTGCTGGTGTTGTGGCCAATGCCCCCAGTCCTC...AGAAACTGATGTGAACAGGAAGCGCGGGTTCAAGATTTCTAAAACTCTATATTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000300650.9
ENST00000530849.1
ENST00000531452.5
CDS-3UTR CCA 90 bp GTATTTGAAAACAGCCCTGGGCAGGGATATCATAATTTCAAGGCCAAACTAAACCCTCTCCTGCTGTGCTaGCCACATCCTTCAAATCAG +
Preference number: 4 (lower is better)
Translates to: VFENSPGQGYHNFKAKLNPLLLC*PHPSNQ
Trigger: CTGATTTGAAGGATGTGGCCAGCACAGCAGGAGAGG...GTTTAGTTTGGCCTTGAAATTATGATATCCCTGCCCAGGGCTGTTTTCAAATAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300650.9
ENST00000531452.5
CDS-3UTR CCA 90 bp AGTCTCATTTTATCCATTTGGAGTAGAGTGGCTAAAACAATACTGAGGCTTCTGAAGAGACCGAGTGACTaGATGGAGGCTCTCCCGAAG +
Preference number: 4 (lower is better)
Translates to: SLILSIWSRVAKTILRLLKRPSD*MEALPK
Trigger: CTTCGGGAGAGCCTCCATCCAGTCACTCGGTCTCTT...CAGAAGCCTCAGTATTGTTTTAGCCACTCTACTCCAAATGGATAAAATGAGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300650.9
ENST00000531452.5
CDS-3UTR CCA 90 bp ATTTTATCCATTTGGAGTAGAGTGGCTAAAACAATACTGAGGCTTCTGGAGGCTGAGCCAGAGAGGGACTaGGTTGAAACACCTGAAGCA +
Preference number: 4 (lower is better)
Translates to: ILSIWSRVAKTILRLLEAEPERD*VETPEA
Trigger: TGCTTCAGGTGTTTCAACCCAGTCCCTCTCTGGCTC...AGCCTCCAGAAGCCTCAGTATTGTTTTAGCCACTCTACTCCAAATGGATAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300650.9
ENST00000530849.1
ENST00000531452.5
CDS-3UTR CCA 90 bp AAATATAGAGTTTTAGAAATCTTGAACCCGCGCTTCCTGTTCACATCAGTTTCTGGCAGGGTTCAGGATTaGGAAAGACAAGGAGCGGGG +
Preference number: 4 (lower is better)
Translates to: KYRVLEILNPRFLFTSVSGRVQD*ERQGAG
Trigger: CCCCGCTCCTTGTCTTTCCCAATCCTGAACCCTGCC...AGAAACTGATGTGAACAGGAAGCGCGGGTTCAAGATTTCTAAAACTCTATATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300650.9
ENST00000530849.1
ENST00000531452.5
CDS-3UTR CCA 90 bp ATTTTATCCATTTGGAGTAGAGTGGCTAAAACAATACTGAGGCTTCTGGAGGCTAGTTTGTCTACTGGTTaGGGCCGGGGAGTTTCAGCA +
Preference number: 4 (lower is better)
Translates to: ILSIWSRVAKTILRLLEASLSTG*GRGVSA
Trigger: TGCTGAAACTCCCCGGCCCCAACCAGTAGACAAACT...AGCCTCCAGAAGCCTCAGTATTGTTTTAGCCACTCTACTCCAAATGGATAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000300650.9
ENST00000530849.1
ENST00000531452.5
CDS-3UTR CCA 90 bp AGAGTTTTAGAAATCTTGAACCCGCGCTTCCTGTTCACATCAGTTTCTCTTCTTAGTTTGTCTACTGGTTaGGGCCGGGGAGTTTCAGCA +
Preference number: 4 (lower is better)
Translates to: RVLEILNPRFLFTSVSLLSLSTG*GRGVSA
Trigger: TGCTGAAACTCCCCGGCCCCAACCAGTAGACAAACT...AAGAAGAGAAACTGATGTGAACAGGAAGCGCGGGTTCAAGATTTCTAAAACTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300650.9
ENST00000530849.1
ENST00000531452.5
CDS-3UTR CCA 90 bp CTCATTTTATCCATTTGGAGTAGAGTGGCTAAAACAATACTGAGGCTTCTGGAGATTGGGGTACTGATTTaGGCCAGTGGAGCAGGGAAC +
Preference number: 4 (lower is better)
Translates to: LILSIWSRVAKTILRLLEIGVLI*ASGAGN
Trigger: GTTCCCTGCTCCACTGGCCCAAATCAGTACCCCAAT...CTCCAGAAGCCTCAGTATTGTTTTAGCCACTCTACTCCAAATGGATAAAATGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300650.9
ENST00000531452.5
CDS-3UTR CCA 90 bp GTATTTGAAAACAGCCCTGGGCAGGGATATCATAATTTCAAGGCCAAACTAAACTGCAGCTCACTGGGCTaGACGAGTTTCTGGCACATT +
Preference number: 4 (lower is better)
Translates to: VFENSPGQGYHNFKAKLNCSSLG*TSFWHI
Trigger: AATGTGCCAGAAACTCGTCCAGCCCAGTGAGCTGCA...GTTTAGTTTGGCCTTGAAATTATGATATCCCTGCCCAGGGCTGTTTTCAAATAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300650.9
ENST00000530849.1
ENST00000531452.5
CDS-3UTR CCA 90 bp AGGCTTTCGGTAAGCAAGGCATCTGGTTGGACAGTGGGTGAGCACCAGGCTTTACTCATTTTATCCATTTaGAGTAGAGTGGCTAAAACA +
Preference number: 4 (lower is better)
Translates to: RLSVSKASGWTVGEHQALLILSI*SRVAKT
Trigger: TGTTTTAGCCACTCTACTCCAAATGGATAAAATGAG...TAAAGCCTGGTGCTCACCCACTGTCCAACCAGATGCCTTGCTTACCGAAAGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300650.9
ENST00000530849.1
ENST00000531452.5
CDS-3UTR CCA 90 bp AAACATCATCTTCCCTACAATCTGCATCCCCCAAAGGAATTGCAAGATGAGGGGGGAGGAATTGGGACCTaGTTATGTTGTTATTCTCGG +
Preference number: 4 (lower is better)
Translates to: KHHLPYNLHPPKELQDEGGGIGT*LCCYSR
Trigger: CCGAGAATAACAACATAACCAGGTCCCAATTCCTCC...CCCCTCATCTTGCAATTCCTTTGGGGGATGCAGATTGTAGGGAAGATGATGTTT
46% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000300650.9
ENST00000530849.1
CDS-3UTR CCA 90 bp AGAAGCTTGTGGGGTACATGGAGGAATTGGGACCTGGTTATGTTGTTATTCTCGCCCAGGAAAAACCTGTaGGTTGTGCTAATTTCTGTC +
Preference number: 4 (lower is better)
Translates to: RSLWGTWRNWDLVMLLFSPRKNL*VVLISV
Trigger: GACAGAAATTAGCACAACCCACAGGTTTTTCCTGGG...CGAGAATAACAACATAACCAGGTCCCAATTCCTCCATGTACCCCACAAGCTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300650.9
ENST00000530849.1
CDS-3UTR TCA 90 bp GTATTTGAAAACAGCCCTGGGCAGGGATATCATAATTTCAAGGCCAAACTAAACGAAACACCTGAAGCATaGAGTCTGTCTCTGATGGGG +
Preference number: 4 (lower is better)
Translates to: VFENSPGQGYHNFKAKLNETPEA*SLSLMG
Trigger: CCCCATCAGAGACAGACTTCATGCTTCAGGTGTTTC...GTTTAGTTTGGCCTTGAAATTATGATATCCCTGCCCAGGGCTGTTTTCAAATAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300650.9
ENST00000530849.1
ENST00000531452.5
CDS-3UTR TCA 90 bp GTATTTGAAAACAGCCCTGGGCAGGGATATCATAATTTCAAGGCCAAACTAAACTGGCCTGTCAGAGCTTaGTTAGAAGCCAAGACAGTG +
Preference number: 4 (lower is better)
Translates to: VFENSPGQGYHNFKAKLNWPVRA*LEAKTV
Trigger: CACTGTCTTGGCTTCTAATCAAGCTCTGACAGGCCA...GTTTAGTTTGGCCTTGAAATTATGATATCCCTGCCCAGGGCTGTTTTCAAATAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300650.9
ENST00000530849.1
CDS-3UTR TCA 90 bp CTCATTTTATCCATTTGGAGTAGAGTGGCTAAAACAATACTGAGGCTTCTGGAGTGGCCTGTCAGAGCTTaGTTAGAAGCCAAGACAGTG +
Preference number: 4 (lower is better)
Translates to: LILSIWSRVAKTILRLLEWPVRA*LEAKTV
Trigger: CACTGTCTTGGCTTCTAATCAAGCTCTGACAGGCCA...CTCCAGAAGCCTCAGTATTGTTTTAGCCACTCTACTCCAAATGGATAAAATGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300650.9
ENST00000530849.1
CDS-3UTR GCA 90 bp ATTTTATCCATTTGGAGTAGAGTGGCTAAAACAATACTGAGGCTTCTGGAGGCTCTTAGTATGGCACCCTaGCTTAAGAGACCGAGTGAC +
Preference number: 4 (lower is better)
Translates to: ILSIWSRVAKTILRLLEALSMAP*LKRPSD
Trigger: GTCACTCGGTCTCTTAAGGCAGGGTGCCATACTAAG...AGCCTCCAGAAGCCTCAGTATTGTTTTAGCCACTCTACTCCAAATGGATAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300650.9
ENST00000531452.5
CDS-3UTR GCA 90 bp AAACATCATCTTCCCTACAATCTGCATCCCCCAAAGGAATTGCAAGATGAGGGGAGATCCTGCTCCTTCTaGAAAAACTCCTTCTTCTCT +
Preference number: 4 (lower is better)
Translates to: KHHLPYNLHPPKELQDEGRSCSF*KNSFFS
Trigger: AGAGAAGAAGGAGTTTTTGCAGAAGGAGCAGGATCT...CCCCTCATCTTGCAATTCCTTTGGGGGATGCAGATTGTAGGGAAGATGATGTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000300650.9
ENST00000530849.1
ENST00000531452.5
CDS-3UTR GCA 90 bp AAATATAGAGTTTTAGAAATCTTGAACCCGCGCTTCCTGTTCACATCAGTTTCTGGATTTGAGGAAGGCTaGTCAGCTTGGCTCCGTTCC +
Preference number: 4 (lower is better)
Translates to: KYRVLEILNPRFLFTSVSGFEEG*SAWLRS
Trigger: GGAACGGAGCCAAGCTGAGCAGCCTTCCTCAAATCC...AGAAACTGATGTGAACAGGAAGCGCGGGTTCAAGATTTCTAAAACTCTATATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300650.9
ENST00000530849.1
ENST00000531452.5
CDS-3UTR GCA 90 bp CTAGGTGGTTTTTATATTGTATTTGAAAACAGCCCTGGGCAGGGATATCATAATCACCCGCTCATGTTCTaGCAGTCGTGCAGCAACCAA +
Preference number: 4 (lower is better)
Translates to: LGGFYIVFENSPGQGYHNHPLMF*QSCSNQ
Trigger: TTGGTTGCTGCACGACTGGCAGAACATGAGCGGGTG...ATTATGATATCCCTGCCCAGGGCTGTTTTCAAATACAATATAAAAACCACCTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000300650.9
ENST00000530849.1
ENST00000531452.5
CDS-3UTR GCA 90 bp AAATATAGAGTTTTAGAAATCTTGAACCCGCGCTTCCTGTTCACATCAGTTTCTTGGCTGAGTACTTGCTaGCACCCGCTCATGTTCTGC +
Preference number: 4 (lower is better)
Translates to: KYRVLEILNPRFLFTSVSWLSTC*HPLMFC
Trigger: GCAGAACATGAGCGGGTGGCAGCAAGTACTCAGCCA...AGAAACTGATGTGAACAGGAAGCGCGGGTTCAAGATTTCTAAAACTCTATATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300650.9
ENST00000531452.5
CDS-3UTR GCA 90 bp AAATATAGAGTTTTAGAAATCTTGAACCCGCGCTTCCTGTTCACATCAGTTTCTTGGAGCCTGAGTACTTaGTGCCACCCGCTCATGTTC +
Preference number: 4 (lower is better)
Translates to: KYRVLEILNPRFLFTSVSWSLST*CHPLMF
Trigger: GAACATGAGCGGGTGGCAGCAAGTACTCAGGCTCCA...AGAAACTGATGTGAACAGGAAGCGCGGGTTCAAGATTTCTAAAACTCTATATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530849.1
CDS-3UTR CCA 90 bp AAATATAGAGTTTTAGAAATCTTGAACCCGCGCTTCCTGTTCACATCAGTTTCTAAGAGACCGAGTGACTaGATGGAGGCTCTCCCGAAG +
Preference number: 4 (lower is better)
Translates to: KYRVLEILNPRFLFTSVSKRPSD*MEALPK
Trigger: CTTCGGGAGAGCCTCCATCCAGTCACTCGGTCTCTT...AGAAACTGATGTGAACAGGAAGCGCGGGTTCAAGATTTCTAAAACTCTATATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300650.9
ENST00000531452.5
CDS-3UTR CCA 90 bp AGAGTTTTAGAAATCTTGAACCCGCGCTTCCTGTTCACATCAGTTTCTCTTCTTGCAAGCTGCTTAGTATaGCACCCTGCCTTAAGAGAC +
Preference number: 4 (lower is better)
Translates to: RVLEILNPRFLFTSVSLLASCLV*HPALRD
Trigger: GTCTCTTAAGGCAGGGTGCCATACTAAGCAGCTTGC...AAGAAGAGAAACTGATGTGAACAGGAAGCGCGGGTTCAAGATTTCTAAAACTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300650.9
ENST00000531452.5
CDS-3UTR CCA 90 bp CTCATTTTATCCATTTGGAGTAGAGTGGCTAAAACAATACTGAGGCTTCTGGAGTCTCCCACTCCTGTTTaGAACGAACTGTCTCCAGTG +
Preference number: 4 (lower is better)
Translates to: LILSIWSRVAKTILRLLESPTPV*NELSPV
Trigger: CACTGGAGACAGTTCGTTCCAAACAGGAGTGGGAGA...CTCCAGAAGCCTCAGTATTGTTTTAGCCACTCTACTCCAAATGGATAAAATGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300650.9
ENST00000530849.1
ENST00000531452.5
CDS-3UTR CCA 90 bp ATTTTATCCATTTGGAGTAGAGTGGCTAAAACAATACTGAGGCTTCTGGAGGCTTCTCCCACTCCTGTTTaGAACGAACTGTCTCCAGTG +
Preference number: 4 (lower is better)
Translates to: ILSIWSRVAKTILRLLEASPTPV*NELSPV
Trigger: CACTGGAGACAGTTCGTTCCAAACAGGAGTGGGAGA...AGCCTCCAGAAGCCTCAGTATTGTTTTAGCCACTCTACTCCAAATGGATAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300650.9
ENST00000530849.1
ENST00000531452.5
CDS-3UTR CCA 90 bp CTAGGTGGTTTTTATATTGTATTTGAAAACAGCCCTGGGCAGGGATATCATAATGGCCTTATTGCACTGTaGGAACCGGGTCAGCAGCTT +
Preference number: 4 (lower is better)
Translates to: LGGFYIVFENSPGQGYHNGLIAL*EPGQQL
Trigger: AAGCTGCTGACCCGGTTCCCACAGTGCAATAAGGCC...ATTATGATATCCCTGCCCAGGGCTGTTTTCAAATACAATATAAAAACCACCTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000300650.9
ENST00000530849.1
ENST00000531452.5
CDS-3UTR CCA 90 bp GTATTTGAAAACAGCCCTGGGCAGGGATATCATAATTTCAAGGCCAAACTAAACGACATAGCTTACAGGTaGCTGGAGCATGTGAAGACC +
Preference number: 4 (lower is better)
Translates to: VFENSPGQGYHNFKAKLNDIAYR*LEHVKT
Trigger: GGTCTTCACATGCTCCAGCCACCTGTAAGCTATGTC...GTTTAGTTTGGCCTTGAAATTATGATATCCCTGCCCAGGGCTGTTTTCAAATAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300650.9
ENST00000531452.5
CDS-3UTR CCA 90 bp AAATATAGAGTTTTAGAAATCTTGAACCCGCGCTTCCTGTTCACATCAGTTTCTAGCAAGGCATCTGGTTaGACAGTGGGTGAGCACCAG +
Preference number: 4 (lower is better)
Translates to: KYRVLEILNPRFLFTSVSSKASG*TVGEHQ
Trigger: CTGGTGCTCACCCACTGTCCAACCAGATGCCTTGCT...AGAAACTGATGTGAACAGGAAGCGCGGGTTCAAGATTTCTAAAACTCTATATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300650.9
ENST00000530849.1
ENST00000531452.5
CDS-3UTR CCA 90 bp ATTTTATCCATTTGGAGTAGAGTGGCTAAAACAATACTGAGGCTTCTGGAGGCTAGCTTGTGGGGTACATaGAGGAATTGGGACCTGGTT +
Preference number: 4 (lower is better)
Translates to: ILSIWSRVAKTILRLLEASLWGT*RNWDLV
Trigger: AACCAGGTCCCAATTCCTCCATGTACCCCACAAGCT...AGCCTCCAGAAGCCTCAGTATTGTTTTAGCCACTCTACTCCAAATGGATAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300650.9
ENST00000530849.1
CDS-3UTR TCA 90 bp CTCATTTTATCCATTTGGAGTAGAGTGGCTAAAACAATACTGAGGCTTCTGGAGTGGTACGTGCTGTCTTaGTCTGCTGAAGAATGTTGG +
Preference number: 4 (lower is better)
Translates to: LILSIWSRVAKTILRLLEWYVLS*SAEECW
Trigger: CCAACATTCTTCAGCAGATCAAGACAGCACGTACCA...CTCCAGAAGCCTCAGTATTGTTTTAGCCACTCTACTCCAAATGGATAAAATGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300650.9
ENST00000530849.1
ENST00000531452.5
CDS-3UTR TCA 90 bp AGTCTCATTTTATCCATTTGGAGTAGAGTGGCTAAAACAATACTGAGGCTTCTGTGGTTGGACAGTGGGTaGGCACCAGGCTTTAAATCT +
Preference number: 4 (lower is better)
Translates to: SLILSIWSRVAKTILRLLWLDSG*APGFKS
Trigger: AGATTTAAAGCCTGGTGCTCACCCACTGTCCAACCA...CAGAAGCCTCAGTATTGTTTTAGCCACTCTACTCCAAATGGATAAAATGAGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300650.9
ENST00000530849.1
ENST00000531452.5
CDS-3UTR TCA 90 bp CTCATTTTATCCATTTGGAGTAGAGTGGCTAAAACAATACTGAGGCTTCTGGAGTGGCTAAAACAATACTaGGGCTTCTGGAGGCTTTCG +
Preference number: 4 (lower is better)
Translates to: LILSIWSRVAKTILRLLEWLKQY*GFWRLS
Trigger: CGAAAGCCTCCAGAAGCCTCAGTATTGTTTTAGCCA...CTCCAGAAGCCTCAGTATTGTTTTAGCCACTCTACTCCAAATGGATAAAATGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000300650.9
ENST00000530849.1
ENST00000531452.5
CDS-3UTR TCA 90 bp GTATTTGAAAACAGCCCTGGGCAGGGATATCATAATTTCAAGGCCAAACTAAACTGGCTAAAACAATACTaGGGCTTCTGGAGGCTTTCG +
Preference number: 4 (lower is better)
Translates to: VFENSPGQGYHNFKAKLNWLKQY*GFWRLS
Trigger: CGAAAGCCTCCAGAAGCCTCAGTATTGTTTTAGCCA...GTTTAGTTTGGCCTTGAAATTATGATATCCCTGCCCAGGGCTGTTTTCAAATAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300650.9
ENST00000530849.1
ENST00000531452.5
CDS-3UTR GCA 90 bp AGAGTTTTAGAAATCTTGAACCCGCGCTTCCTGTTCACATCAGTTTCTCTTCTTAGAGGCGAGTTCTTCTaGTTCTGTGCAGAGTCTTTG +
Preference number: 4 (lower is better)
Translates to: RVLEILNPRFLFTSVSLLRGEFF*FCAESL
Trigger: CAAAGACTCTGCACAGAAGCAGAAGAACTCGCCTCT...AAGAAGAGAAACTGATGTGAACAGGAAGCGCGGGTTCAAGATTTCTAAAACTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300650.9
ENST00000530849.1
ENST00000531452.5
CDS-3UTR GCA 90 bp AGAGTTTTAGAAATCTTGAACCCGCGCTTCCTGTTCACATCAGTTTCTCTTCTTGATGAACCAGGATTCTaGTCTGAGTGCTCCAAATGG +
Preference number: 4 (lower is better)
Translates to: RVLEILNPRFLFTSVSLLDEPGF*SECSKW
Trigger: CCATTTGGAGCACTCAGAGCAGAATCCTGGTTCATC...AAGAAGAGAAACTGATGTGAACAGGAAGCGCGGGTTCAAGATTTCTAAAACTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300650.9
ENST00000531452.5
CDS-3UTR GCA 90 bp AGAGTCACAGCTTTCCCAGGTATAAAACCTAAAATTAAGAAGTACAATAAGCAGCCTAAAACCACCTGGTaGGCTGCTGAGGTGTCACCT +
Preference number: 4 (lower is better)
Translates to: RVTAFPGIKPKIKKYNKQPKTTW*AAEVSP
Trigger: AGGTGACACCTCAGCAGCGCACCAGGTGGTTTTAGG...CTGCTTATTGTACTTCTTAATTTTAGGTTTTATACCTGGGAAAGCTGTGACTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000300650.9
CDS-3UTR GCA 90 bp AGAAGCTTGTGGGGTACATGGAGGAATTGGGACCTGGTTATGTTGTTATTCTCGAGTAAGGTGCAATTCTaGCTCTTTTTCTGCTTCTTC +
Preference number: 4 (lower is better)
Translates to: RSLWGTWRNWDLVMLLFSSKVQF*LFFCFF
Trigger: GAAGAAGCAGAAAAAGAGGCAGAATTGCACCTTACT...CGAGAATAACAACATAACCAGGTCCCAATTCCTCCATGTACCCCACAAGCTTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300650.9
ENST00000530849.1
CDS-3UTR GCA 90 bp AGAGTCACAGCTTTCCCAGGTATAAAACCTAAAATTAAGAAGTACAATAAGCAGGGATTTGAGGAAGGCTaGTCAGCTTGGCTCCGTTCC +
Preference number: 4 (lower is better)
Translates to: RVTAFPGIKPKIKKYNKQGFEEG*SAWLRS
Trigger: GGAACGGAGCCAAGCTGAGCAGCCTTCCTCAAATCC...CTGCTTATTGTACTTCTTAATTTTAGGTTTTATACCTGGGAAAGCTGTGACTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300650.9
ENST00000530849.1
CDS-3UTR GCA 90 bp CTAGGTGGTTTTTATATTGTATTTGAAAACAGCCCTGGGCAGGGATATCATAATATGGGCATTGTGACCTaGCCAATGGAGAAGGGCATC +
Preference number: 4 (lower is better)
Translates to: LGGFYIVFENSPGQGYHNMGIVT*PMEKGI
Trigger: GATGCCCTTCTCCATTGGGCAGGTCACAATGCCCAT...ATTATGATATCCCTGCCCAGGGCTGTTTTCAAATACAATATAAAAACCACCTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000300650.9
ENST00000530849.1
ENST00000531452.5
CDS-3UTR GCA 90 bp AGAGTTTTAGAAATCTTGAACCCGCGCTTCCTGTTCACATCAGTTTCTCTTCTTATGTTCTGCCAGTCGTaGAGCAACCAACTGGATAAG +
Preference number: 4 (lower is better)
Translates to: RVLEILNPRFLFTSVSLLMFCQS*SNQLDK
Trigger: CTTATCCAGTTGGTTGCTGCACGACTGGCAGAACAT...AAGAAGAGAAACTGATGTGAACAGGAAGCGCGGGTTCAAGATTTCTAAAACTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300650.9
ENST00000530849.1
ENST00000531452.5
CDS-3UTR GCA 90 bp AGAGTCACAGCTTTCCCAGGTATAAAACCTAAAATTAAGAAGTACAATAAGCAGAGCCTGAGTACTTGCTaGCACCCGCTCATGTTCTGC +
Preference number: 4 (lower is better)
Translates to: RVTAFPGIKPKIKKYNKQSLSTC*HPLMFC
Trigger: GCAGAACATGAGCGGGTGGCAGCAAGTACTCAGGCT...CTGCTTATTGTACTTCTTAATTTTAGGTTTTATACCTGGGAAAGCTGTGACTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530849.1
CDS-3UTR CCA 90 bp GTATTTGAAAACAGCCCTGGGCAGGGATATCATAATTTCAAGGCCAAACTAAACTCTGTGCAGAGTCTTTaGTGCTTAGACCATCTGGGA +
Preference number: 4 (lower is better)
Translates to: VFENSPGQGYHNFKAKLNSVQSL*CLDHLG
Trigger: TCCCAGATGGTCTAAGCACCAAAGACTCTGCACAGA...GTTTAGTTTGGCCTTGAAATTATGATATCCCTGCCCAGGGCTGTTTTCAAATAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300650.9
ENST00000530849.1
ENST00000531452.5
CDS-3UTR CCA 90 bp AAATATAGAGTTTTAGAAATCTTGAACCCGCGCTTCCTGTTCACATCAGTTTCTTCTCCTAAAACCACCTaGTGCGCTGCTGAGGTGTCA +
Preference number: 4 (lower is better)
Translates to: KYRVLEILNPRFLFTSVSSPKTT*CAAEVS
Trigger: TGACACCTCAGCAGCGCACCAGGTGGTTTTAGGAGA...AGAAACTGATGTGAACAGGAAGCGCGGGTTCAAGATTTCTAAAACTCTATATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300650.9
ENST00000531452.5
CDS-3UTR CCA 90 bp CTCATTTTATCCATTTGGAGTAGAGTGGCTAAAACAATACTGAGGCTTCTGGAGTTCAACCCCATTTGCTaGAGACACTACAGGTCGGAA +
Preference number: 4 (lower is better)
Translates to: LILSIWSRVAKTILRLLEFNPIC*RHYRSE
Trigger: TTCCGACCTGTAGTGTCTCCAGCAAATGGGGTTGAA...CTCCAGAAGCCTCAGTATTGTTTTAGCCACTCTACTCCAAATGGATAAAATGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300650.9
ENST00000531452.5
CDS-3UTR CCA 90 bp GTATTTGAAAACAGCCCTGGGCAGGGATATCATAATTTCAAGGCCAAACTAAACTTCAACCCCATTTGCTaGAGACACTACAGGTCGGAA +
Preference number: 4 (lower is better)
Translates to: VFENSPGQGYHNFKAKLNFNPIC*RHYRSE
Trigger: TTCCGACCTGTAGTGTCTCCAGCAAATGGGGTTGAA...GTTTAGTTTGGCCTTGAAATTATGATATCCCTGCCCAGGGCTGTTTTCAAATAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300650.9
ENST00000531452.5
CDS-3UTR CCA 90 bp AAATATAGAGTTTTAGAAATCTTGAACCCGCGCTTCCTGTTCACATCAGTTTCTGAGCCAGAGAGGGACTaGGTTGAAACACCTGAAGCA +
Preference number: 4 (lower is better)
Translates to: KYRVLEILNPRFLFTSVSEPERD*VETPEA
Trigger: TGCTTCAGGTGTTTCAACCCAGTCCCTCTCTGGCTC...AGAAACTGATGTGAACAGGAAGCGCGGGTTCAAGATTTCTAAAACTCTATATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300650.9
ENST00000530849.1
ENST00000531452.5
CDS-3UTR CCA 90 bp AGAGTCACAGCTTTCCCAGGTATAAAACCTAAAATTAAGAAGTACAATAAGCAGCTCCAGTTTGTCTACTaGTTGGGGCCGGGGAGTTTC +
Preference number: 4 (lower is better)
Translates to: RVTAFPGIKPKIKKYNKQLQFVY*LGPGSF
Trigger: GAAACTCCCCGGCCCCAACCAGTAGACAAACTGGAG...CTGCTTATTGTACTTCTTAATTTTAGGTTTTATACCTGGGAAAGCTGTGACTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000300650.9
ENST00000530849.1
CDS-3UTR CCA 90 bp CTAGGTGGTTTTTATATTGTATTTGAAAACAGCCCTGGGCAGGGATATCATAATTGCAGCTCACTGGGCTaGACGAGTTTCTGGCACATT +
Preference number: 4 (lower is better)
Translates to: LGGFYIVFENSPGQGYHNCSSLG*TSFWHI
Trigger: AATGTGCCAGAAACTCGTCCAGCCCAGTGAGCTGCA...ATTATGATATCCCTGCCCAGGGCTGTTTTCAAATACAATATAAAAACCACCTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000300650.9
ENST00000530849.1
ENST00000531452.5
CDS-3UTR CCA 90 bp AAATATAGAGTTTTAGAAATCTTGAACCCGCGCTTCCTGTTCACATCAGTTTCTTGCAGCTCACTGGGCTaGACGAGTTTCTGGCACATT +
Preference number: 4 (lower is better)
Translates to: KYRVLEILNPRFLFTSVSCSSLG*TSFWHI
Trigger: AATGTGCCAGAAACTCGTCCAGCCCAGTGAGCTGCA...AGAAACTGATGTGAACAGGAAGCGCGGGTTCAAGATTTCTAAAACTCTATATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300650.9
ENST00000530849.1
ENST00000531452.5
CDS-3UTR CCA 90 bp ATTTTATCCATTTGGAGTAGAGTGGCTAAAACAATACTGAGGCTTCTGGAGGCTTCCTTGTGCAATACATaGGTACACGCCATTGGATGC +
Preference number: 4 (lower is better)
Translates to: ILSIWSRVAKTILRLLEASLCNT*VHAIGC
Trigger: GCATCCAATGGCGTGTACCCATGTATTGCACAAGGA...AGCCTCCAGAAGCCTCAGTATTGTTTTAGCCACTCTACTCCAAATGGATAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300650.9
ENST00000530849.1
ENST00000531452.5
CDS-3UTR CCA 90 bp AGAGTTTTAGAAATCTTGAACCCGCGCTTCCTGTTCACATCAGTTTCTCTTCTTTCCTTGTGCAATACATaGGTACACGCCATTGGATGC +
Preference number: 4 (lower is better)
Translates to: RVLEILNPRFLFTSVSLLSLCNT*VHAIGC
Trigger: GCATCCAATGGCGTGTACCCATGTATTGCACAAGGA...AAGAAGAGAAACTGATGTGAACAGGAAGCGCGGGTTCAAGATTTCTAAAACTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300650.9
ENST00000530849.1
ENST00000531452.5
CDS-3UTR TCA 90 bp AGAGTTTTAGAAATCTTGAACCCGCGCTTCCTGTTCACATCAGTTTCTCTTCTTCGCCATCCTGATTCTTaGGTCTATCCAGTTCCATTT +
Preference number: 4 (lower is better)
Translates to: RVLEILNPRFLFTSVSLLRHPDS*VYPVPF
Trigger: AAATGGAACTGGATAGACTCAAGAATCAGGATGGCG...AAGAAGAGAAACTGATGTGAACAGGAAGCGCGGGTTCAAGATTTCTAAAACTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300650.9
ENST00000530849.1
ENST00000531452.5
CDS-3UTR TCA 90 bp CAGAAGCTTGTGGGGTACATGGAGGAATTGGGACCTGGTTATGTTGTTATTCTCCTCACTAACTGGATATaGCTATTAAATTGGTCACGA +
Preference number: 4 (lower is better)
Translates to: QKLVGYMEELGPGYVVILLTNWI*LLNWSR
Trigger: TCGTGACCAATTTAATAGTCATATCCAGTTAGTGAG...GAGAATAACAACATAACCAGGTCCCAATTCCTCCATGTACCCCACAAGCTTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300650.9
ENST00000530849.1
CDS-3UTR TCA 90 bp CTAGGTGGTTTTTATATTGTATTTGAAAACAGCCCTGGGCAGGGATATCATAATGAAACACCTGAAGCATaGAGTCTGTCTCTGATGGGG +
Preference number: 4 (lower is better)
Translates to: LGGFYIVFENSPGQGYHNETPEA*SLSLMG
Trigger: CCCCATCAGAGACAGACTTCATGCTTCAGGTGTTTC...ATTATGATATCCCTGCCCAGGGCTGTTTTCAAATACAATATAAAAACCACCTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000300650.9
ENST00000530849.1
ENST00000531452.5
CDS-3UTR TCA 90 bp ATTTTATCCATTTGGAGTAGAGTGGCTAAAACAATACTGAGGCTTCTGGAGGCTTCTGGGCCCAGAATTTaGTACACTCCTTGTGCAATA +
Preference number: 4 (lower is better)
Translates to: ILSIWSRVAKTILRLLEASGPRI*YTPCAI
Trigger: TATTGCACAAGGAGTGTATCAAATTCTGGGCCCAGA...AGCCTCCAGAAGCCTCAGTATTGTTTTAGCCACTCTACTCCAAATGGATAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300650.9
ENST00000530849.1
ENST00000531452.5
CDS-3UTR TCA 90 bp AGAGTTTTAGAAATCTTGAACCCGCGCTTCCTGTTCACATCAGTTTCTCTTCTTAAATGGACTAGAGGCTaGGCCAAACCAAAGCAGAAT +
Preference number: 4 (lower is better)
Translates to: RVLEILNPRFLFTSVSLLKWTRG*AKPKQN
Trigger: ATTCTGCTTTGGTTTGGCTCAGCCTCTAGTCCATTT...AAGAAGAGAAACTGATGTGAACAGGAAGCGCGGGTTCAAGATTTCTAAAACTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300650.9
ENST00000530849.1
ENST00000531452.5
CDS-3UTR TCA 90 bp AAATATAGAGTTTTAGAAATCTTGAACCCGCGCTTCCTGTTCACATCAGTTTCTTGGTTGGACAGTGGGTaGGCACCAGGCTTTAAATCT +
Preference number: 4 (lower is better)
Translates to: KYRVLEILNPRFLFTSVSWLDSG*APGFKS
Trigger: AGATTTAAAGCCTGGTGCTCACCCACTGTCCAACCA...AGAAACTGATGTGAACAGGAAGCGCGGGTTCAAGATTTCTAAAACTCTATATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300650.9
ENST00000530849.1
ENST00000531452.5
CDS-3UTR GCA 90 bp AAATATAGAGTTTTAGAAATCTTGAACCCGCGCTTCCTGTTCACATCAGTTTCTGTGCAGAGTCTTTGGTaGTTAGACCATCTGGGAGAC +
Preference number: 4 (lower is better)
Translates to: KYRVLEILNPRFLFTSVSVQSLW*LDHLGD
Trigger: GTCTCCCAGATGGTCTAAGCACCAAAGACTCTGCAC...AGAAACTGATGTGAACAGGAAGCGCGGGTTCAAGATTTCTAAAACTCTATATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300650.9
ENST00000530849.1
ENST00000531452.5
CDS-3UTR GCA 90 bp CTAGGTGGTTTTTATATTGTATTTGAAAACAGCCCTGGGCAGGGATATCATAATGTGCAGAGTCTTTGGTaGTTAGACCATCTGGGAGAC +
Preference number: 4 (lower is better)
Translates to: LGGFYIVFENSPGQGYHNVQSLW*LDHLGD
Trigger: GTCTCCCAGATGGTCTAAGCACCAAAGACTCTGCAC...ATTATGATATCCCTGCCCAGGGCTGTTTTCAAATACAATATAAAAACCACCTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000300650.9
ENST00000530849.1
ENST00000531452.5
CDS-3UTR GCA 90 bp AAATATAGAGTTTTAGAAATCTTGAACCCGCGCTTCCTGTTCACATCAGTTTCTCTTAGTATGGCACCCTaGCTTAAGAGACCGAGTGAC +
Preference number: 4 (lower is better)
Translates to: KYRVLEILNPRFLFTSVSLSMAP*LKRPSD
Trigger: GTCACTCGGTCTCTTAAGGCAGGGTGCCATACTAAG...AGAAACTGATGTGAACAGGAAGCGCGGGTTCAAGATTTCTAAAACTCTATATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300650.9
ENST00000531452.5
CDS-3UTR GCA 90 bp AAATATAGAGTTTTAGAAATCTTGAACCCGCGCTTCCTGTTCACATCAGTTTCTTCCTTCAACCCCATTTaGTGGAGACACTACAGGTCG +
Preference number: 4 (lower is better)
Translates to: KYRVLEILNPRFLFTSVSSFNPI*WRHYRS
Trigger: CGACCTGTAGTGTCTCCAGCAAATGGGGTTGAAGGA...AGAAACTGATGTGAACAGGAAGCGCGGGTTCAAGATTTCTAAAACTCTATATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300650.9
ENST00000531452.5
CDS-3UTR GCA 90 bp AAATATAGAGTTTTAGAAATCTTGAACCCGCGCTTCCTGTTCACATCAGTTTCTCCCACACCTCTCTTCTaGCCTTCTCACAAAGCTTCT +
Preference number: 4 (lower is better)
Translates to: KYRVLEILNPRFLFTSVSPTPLF*PSHKAS
Trigger: AGAAGCTTTGTGAGAAGGGCAGAAGAGAGGTGTGGG...AGAAACTGATGTGAACAGGAAGCGCGGGTTCAAGATTTCTAAAACTCTATATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300650.9
ENST00000530849.1
ENST00000531452.5
CDS-3UTR GCA 90 bp AAATATAGAGTTTTAGAAATCTTGAACCCGCGCTTCCTGTTCACATCAGTTTCTTGCCATGGTGGTACGTaGTGTCTTGATCTGCTGAAG +
Preference number: 4 (lower is better)
Translates to: KYRVLEILNPRFLFTSVSCHGGT*CLDLLK
Trigger: CTTCAGCAGATCAAGACAGCACGTACCACCATGGCA...AGAAACTGATGTGAACAGGAAGCGCGGGTTCAAGATTTCTAAAACTCTATATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300650.9
ENST00000530849.1
ENST00000531452.5
CDS-3UTR GCA 90 bp GTATTTGAAAACAGCCCTGGGCAGGGATATCATAATTTCAAGGCCAAACTAAACTTGATACACTCCTTGTaGAATACATGGGTACACGCC +
Preference number: 4 (lower is better)
Translates to: VFENSPGQGYHNFKAKLNLIHSL*NTWVHA
Trigger: GGCGTGTACCCATGTATTGCACAAGGAGTGTATCAA...GTTTAGTTTGGCCTTGAAATTATGATATCCCTGCCCAGGGCTGTTTTCAAATAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300650.9
ENST00000530849.1
ENST00000531452.5
CDS-3UTR CCA 90 bp AGAGTTTTAGAAATCTTGAACCCGCGCTTCCTGTTCACATCAGTTTCTCTTCTTTCTGCTGAAGAATGTTaGTCATCTGGGCCTTATTGC +
Preference number: 4 (lower is better)
Translates to: RVLEILNPRFLFTSVSLLSAEEC*SSGPYC
Trigger: GCAATAAGGCCCAGATGACCAACATTCTTCAGCAGA...AAGAAGAGAAACTGATGTGAACAGGAAGCGCGGGTTCAAGATTTCTAAAACTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300650.9
ENST00000530849.1
ENST00000531452.5
CDS-3UTR CCA 90 bp ATTTTATCCATTTGGAGTAGAGTGGCTAAAACAATACTGAGGCTTCTGGAGGCTCCCAGGAAAAACCTGTaGGTTGTGCTAATTTCTGTC +
Preference number: 4 (lower is better)
Translates to: ILSIWSRVAKTILRLLEAPRKNL*VVLISV
Trigger: GACAGAAATTAGCACAACCCACAGGTTTTTCCTGGG...AGCCTCCAGAAGCCTCAGTATTGTTTTAGCCACTCTACTCCAAATGGATAAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000300650.9
ENST00000530849.1
CDS-3UTR CCA 90 bp AAATATAGAGTTTTAGAAATCTTGAACCCGCGCTTCCTGTTCACATCAGTTTCTGACATAGCTTACAGGTaGCTGGAGCCTGAGTACTTG +
Preference number: 4 (lower is better)
Translates to: KYRVLEILNPRFLFTSVSDIAYR*LEPEYL
Trigger: CAAGTACTCAGGCTCCAGCCACCTGTAAGCTATGTC...AGAAACTGATGTGAACAGGAAGCGCGGGTTCAAGATTTCTAAAACTCTATATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530849.1
CDS-3UTR TCA 90 bp AGTCTCATTTTATCCATTTGGAGTAGAGTGGCTAAAACAATACTGAGGCTTCTGTCTGGGCCCAGAATTTaGTACACTCCTTGTGCAATA +
Preference number: 4 (lower is better)
Translates to: SLILSIWSRVAKTILRLLSGPRI*YTPCAI
Trigger: TATTGCACAAGGAGTGTATCAAATTCTGGGCCCAGA...CAGAAGCCTCAGTATTGTTTTAGCCACTCTACTCCAAATGGATAAAATGAGACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300650.9
ENST00000530849.1
ENST00000531452.5
CDS-3UTR TCA 90 bp GTATTTGAAAACAGCCCTGGGCAGGGATATCATAATTTCAAGGCCAAACTAAACCAAACAACTTGGTTGTaGACCAACTGCCTTAACCTT +
Preference number: 4 (lower is better)
Translates to: VFENSPGQGYHNFKAKLNQTTWL*TNCLNL
Trigger: AAGGTTAAGGCAGTTGGTTCACAACCAAGTTGTTTG...GTTTAGTTTGGCCTTGAAATTATGATATCCCTGCCCAGGGCTGTTTTCAAATAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300650.9
ENST00000530849.1
CDS-3UTR GCA 90 bp CTAGGTGGTTTTTATATTGTATTTGAAAACAGCCCTGGGCAGGGATATCATAATATGTTCTGCCAGTCGTaGAGCAACCAACTGGATAAG +
Preference number: 4 (lower is better)
Translates to: LGGFYIVFENSPGQGYHNMFCQS*SNQLDK
Trigger: CTTATCCAGTTGGTTGCTGCACGACTGGCAGAACAT...ATTATGATATCCCTGCCCAGGGCTGTTTTCAAATACAATATAAAAACCACCTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000300650.9
ENST00000530849.1
ENST00000531452.5
CDS-3UTR GCA 90 bp AGTCTCATTTTATCCATTTGGAGTAGAGTGGCTAAAACAATACTGAGGCTTCTGTTGATACACTCCTTGTaGAATACATGGGTACACGCC +
Preference number: 4 (lower is better)
Translates to: SLILSIWSRVAKTILRLLLIHSL*NTWVHA
Trigger: GGCGTGTACCCATGTATTGCACAAGGAGTGTATCAA...CAGAAGCCTCAGTATTGTTTTAGCCACTCTACTCCAAATGGATAAAATGAGACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300650.9
ENST00000530849.1
ENST00000531452.5
CDS-3UTR GCA 90 bp AGTCTCATTTTATCCATTTGGAGTAGAGTGGCTAAAACAATACTGAGGCTTCTGATCTTCCCTACAATCTaGATCCCCCAAAGGAATTGC +
Preference number: 4 (lower is better)
Translates to: SLILSIWSRVAKTILRLLIFPTI*IPQRNC
Trigger: GCAATTCCTTTGGGGGATGCAGATTGTAGGGAAGAT...CAGAAGCCTCAGTATTGTTTTAGCCACTCTACTCCAAATGGATAAAATGAGACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000300650.9
ENST00000530849.1
ENST00000531452.5
CDS-3UTR CCA 90 bp AGAGTCACAGCTTTCCCAGGTATAAAACCTAAAATTAAGAAGTACAATAAGCAGCGTGCAGCAACCAACTaGATAAGTTCCTCCATGGTC +
Preference number: 4 (lower is better)
Translates to: RVTAFPGIKPKIKKYNKQRAATN*ISSSMV
Trigger: GACCATGGAGGAACTTATCCAGTTGGTTGCTGCACG...CTGCTTATTGTACTTCTTAATTTTAGGTTTTATACCTGGGAAAGCTGTGACTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300650.9
ENST00000530849.1
CDS-3UTR CCA 90 bp AGTCTCATTTTATCCATTTGGAGTAGAGTGGCTAAAACAATACTGAGGCTTCTGGGCTGGACGAGTTTCTaGCACATTAGACATAGCTTA +
Preference number: 4 (lower is better)
Translates to: SLILSIWSRVAKTILRLLGWTSF*HIRHSL
Trigger: TAAGCTATGTCTAATGTGCCAGAAACTCGTCCAGCC...CAGAAGCCTCAGTATTGTTTTAGCCACTCTACTCCAAATGGATAAAATGAGACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300650.9
ENST00000530849.1
ENST00000531452.5
CDS-3UTR CCA 90 bp AGAGTTTTAGAAATCTTGAACCCGCGCTTCCTGTTCACATCAGTTTCTCTTCTTTCATTTGTGTTGGTCTaGGCCCAGAATTTGATACAC +
Preference number: 4 (lower is better)
Translates to: RVLEILNPRFLFTSVSLLSFVLV*AQNLIH
Trigger: GTGTATCAAATTCTGGGCCCAGACCAACACAAATGA...AAGAAGAGAAACTGATGTGAACAGGAAGCGCGGGTTCAAGATTTCTAAAACTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300650.9
ENST00000530849.1
ENST00000531452.5
CDS-3UTR CCA 90 bp CTCATTTTATCCATTTGGAGTAGAGTGGCTAAAACAATACTGAGGCTTCTGGAGTCATTTGTGTTGGTCTaGGCCCAGAATTTGATACAC +
Preference number: 4 (lower is better)
Translates to: LILSIWSRVAKTILRLLESFVLV*AQNLIH
Trigger: GTGTATCAAATTCTGGGCCCAGACCAACACAAATGA...CTCCAGAAGCCTCAGTATTGTTTTAGCCACTCTACTCCAAATGGATAAAATGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300650.9
ENST00000530849.1
ENST00000531452.5
CDS-3UTR CCA 90 bp CAGAAGCTTGTGGGGTACATGGAGGAATTGGGACCTGGTTATGTTGTTATTCTCCTCATTTTATCCATTTaGAGTAGAGTGGCTAAAACA +
Preference number: 4 (lower is better)
Translates to: QKLVGYMEELGPGYVVILLILSI*SRVAKT
Trigger: TGTTTTAGCCACTCTACTCCAAATGGATAAAATGAG...GAGAATAACAACATAACCAGGTCCCAATTCCTCCATGTACCCCACAAGCTTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300650.9
ENST00000530849.1
CDS-3UTR CCA 90 bp AGAGTTTTAGAAATCTTGAACCCGCGCTTCCTGTTCACATCAGTTTCTCTTCTTGGTACATGGAGGAATTaGGACCTGGTTATGTTGTTA +
Preference number: 4 (lower is better)
Translates to: RVLEILNPRFLFTSVSLLGTWRN*DLVMLL
Trigger: TAACAACATAACCAGGTCCCAATTCCTCCATGTACC...AAGAAGAGAAACTGATGTGAACAGGAAGCGCGGGTTCAAGATTTCTAAAACTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300650.9
ENST00000530849.1
CDS-3UTR TCA 90 bp AAATATAGAGTTTTAGAAATCTTGAACCCGCGCTTCCTGTTCACATCAGTTTCTCGCCATCCTGATTCTTaGGTCTATCCAGTTCCATTT +
Preference number: 4 (lower is better)
Translates to: KYRVLEILNPRFLFTSVSRHPDS*VYPVPF
Trigger: AAATGGAACTGGATAGACTCAAGAATCAGGATGGCG...AGAAACTGATGTGAACAGGAAGCGCGGGTTCAAGATTTCTAAAACTCTATATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300650.9
ENST00000530849.1
ENST00000531452.5
CDS-3UTR TCA 90 bp GTATTTGAAAACAGCCCTGGGCAGGGATATCATAATTTCAAGGCCAAACTAAACTTTATTTCGCCATCCTaGTTCTTGAGTCTATCCAGT +
Preference number: 4 (lower is better)
Translates to: VFENSPGQGYHNFKAKLNFISPS*FLSLSS
Trigger: ACTGGATAGACTCAAGAATCAGGATGGCGAAATAAA...GTTTAGTTTGGCCTTGAAATTATGATATCCCTGCCCAGGGCTGTTTTCAAATAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300650.9
ENST00000530849.1
ENST00000531452.5
CDS-3UTR GCA 90 bp CTAGGTGGTTTTTATATTGTATTTGAAAACAGCCCTGGGCAGGGATATCATAATTCAGCTTTCAGATCCTaGTCCTTCTGCAAAAACTCC +
Preference number: 4 (lower is better)
Translates to: LGGFYIVFENSPGQGYHNSAFRS*SFCKNS
Trigger: GGAGTTTTTGCAGAAGGAGCAGGATCTGAAAGCTGA...ATTATGATATCCCTGCCCAGGGCTGTTTTCAAATACAATATAAAAACCACCTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000300650.9
ENST00000530849.1
ENST00000531452.5
CDS-3UTR GCA 90 bp GTATTTGAAAACAGCCCTGGGCAGGGATATCATAATTTCAAGGCCAAACTAAACAGTAAGGTGCAATTCTaGCTCTTTTTCTGCTTCTTC +
Preference number: 4 (lower is better)
Translates to: VFENSPGQGYHNFKAKLNSKVQF*LFFCFF
Trigger: GAAGAAGCAGAAAAAGAGGCAGAATTGCACCTTACT...GTTTAGTTTGGCCTTGAAATTATGATATCCCTGCCCAGGGCTGTTTTCAAATAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000300650.9
ENST00000530849.1
ENST00000531452.5
CDS-3UTR CCA 90 bp AAATATAGAGTTTTAGAAATCTTGAACCCGCGCTTCCTGTTCACATCAGTTTCTGGCTGGACGAGTTTCTaGCACATTAGACATAGCTTA +
Preference number: 4 (lower is better)
Translates to: KYRVLEILNPRFLFTSVSGWTSF*HIRHSL
Trigger: TAAGCTATGTCTAATGTGCCAGAAACTCGTCCAGCC...AGAAACTGATGTGAACAGGAAGCGCGGGTTCAAGATTTCTAAAACTCTATATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300650.9
ENST00000530849.1
ENST00000531452.5
CDS-3UTR CCA 90 bp AAATATAGAGTTTTAGAAATCTTGAACCCGCGCTTCCTGTTCACATCAGTTTCTGGAGGAATTGGGACCTaGTTATGTTGTTATTCTCGG +
Preference number: 4 (lower is better)
Translates to: KYRVLEILNPRFLFTSVSGGIGT*LCCYSR
Trigger: CCGAGAATAACAACATAACCAGGTCCCAATTCCTCC...AGAAACTGATGTGAACAGGAAGCGCGGGTTCAAGATTTCTAAAACTCTATATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300650.9
ENST00000530849.1
CDS-3UTR CCA 90 bp AGAGTCACAGCTTTCCCAGGTATAAAACCTAAAATTAAGAAGTACAATAAGCAGGTCCAGAAAATAGGGTaGACAGAAGCTTGTGGGGTA +
Preference number: 4 (lower is better)
Translates to: RVTAFPGIKPKIKKYNKQVQKIG*TEACGV
Trigger: TACCCCACAAGCTTCTGTCCACCCTATTTTCTGGAC...CTGCTTATTGTACTTCTTAATTTTAGGTTTTATACCTGGGAAAGCTGTGACTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000300650.9
ENST00000530849.1
CDS-3UTR TCA 90 bp CTCATTTTATCCATTTGGAGTAGAGTGGCTAAAACAATACTGAGGCTTCTGGAGCTCACTAACTGGATATaGCTATTAAATTGGTCACGA +
Preference number: 4 (lower is better)
Translates to: LILSIWSRVAKTILRLLELTNWI*LLNWSR
Trigger: TCGTGACCAATTTAATAGTCATATCCAGTTAGTGAG...CTCCAGAAGCCTCAGTATTGTTTTAGCCACTCTACTCCAAATGGATAAAATGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300650.9
ENST00000530849.1
ENST00000531452.5
CDS-3UTR TCA 90 bp CTAGGTGGTTTTTATATTGTATTTGAAAACAGCCCTGGGCAGGGATATCATAATCAAACAACTTGGTTGTaGACCAACTGCCTTAACCTT +
Preference number: 4 (lower is better)
Translates to: LGGFYIVFENSPGQGYHNQTTWL*TNCLNL
Trigger: AAGGTTAAGGCAGTTGGTTCACAACCAAGTTGTTTG...ATTATGATATCCCTGCCCAGGGCTGTTTTCAAATACAATATAAAAACCACCTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300650.9
ENST00000530849.1
CDS-3UTR CCA 90 bp AGTCTCATTTTATCCATTTGGAGTAGAGTGGCTAAAACAATACTGAGGCTTCTGAAAGACAAAGGGCTGTaGCTATCAAGTTTTCTCCTA +
Preference number: 4 (lower is better)
Translates to: SLILSIWSRVAKTILRLLKDKGL*LSSFLL
Trigger: TAGGAGAAAACTTGATAGCCACAGCCCTTTGTCTTT...CAGAAGCCTCAGTATTGTTTTAGCCACTCTACTCCAAATGGATAAAATGAGACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300650.9
ENST00000531452.5
CDS-3UTR CCA 90 bp AAATATAGAGTTTTAGAAATCTTGAACCCGCGCTTCCTGTTCACATCAGTTTCTTACCTTCCTTTAGGATaGAGGTTTGTGGGGATTTCT +
Preference number: 4 (lower is better)
Translates to: KYRVLEILNPRFLFTSVSYLPLG*RFVGIS
Trigger: AGAAATCCCCACAAACCTCCATCCTAAAGGAAGGTA...AGAAACTGATGTGAACAGGAAGCGCGGGTTCAAGATTTCTAAAACTCTATATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300650.9
ENST00000531452.5
CDS-3UTR CCA 90 bp AGAGTCACAGCTTTCCCAGGTATAAAACCTAAAATTAAGAAGTACAATAAGCAGGGCTGGACGAGTTTCTaGCACATTAGACATAGCTTA +
Preference number: 4 (lower is better)
Translates to: RVTAFPGIKPKIKKYNKQGWTSF*HIRHSL
Trigger: TAAGCTATGTCTAATGTGCCAGAAACTCGTCCAGCC...CTGCTTATTGTACTTCTTAATTTTAGGTTTTATACCTGGGAAAGCTGTGACTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300650.9
ENST00000530849.1
CDS-3UTR CCA 90 bp AGAGTCACAGCTTTCCCAGGTATAAAACCTAAAATTAAGAAGTACAATAAGCAGTCATTTGTGTTGGTCTaGGCCCAGAATTTGATACAC +
Preference number: 4 (lower is better)
Translates to: RVTAFPGIKPKIKKYNKQSFVLV*AQNLIH
Trigger: GTGTATCAAATTCTGGGCCCAGACCAACACAAATGA...CTGCTTATTGTACTTCTTAATTTTAGGTTTTATACCTGGGAAAGCTGTGACTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300650.9
ENST00000530849.1
CDS-3UTR CCA 90 bp AGAGTCACAGCTTTCCCAGGTATAAAACCTAAAATTAAGAAGTACAATAAGCAGGGTACATGGAGGAATTaGGACCTGGTTATGTTGTTA +
Preference number: 4 (lower is better)
Translates to: RVTAFPGIKPKIKKYNKQGTWRN*DLVMLL
Trigger: TAACAACATAACCAGGTCCCAATTCCTCCATGTACC...CTGCTTATTGTACTTCTTAATTTTAGGTTTTATACCTGGGAAAGCTGTGACTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300650.9
ENST00000530849.1
CDS-3UTR TCA 90 bp AGAGTCACAGCTTTCCCAGGTATAAAACCTAAAATTAAGAAGTACAATAAGCAGCTCACTAACTGGATATaGCTATTAAATTGGTCACGA +
Preference number: 4 (lower is better)
Translates to: RVTAFPGIKPKIKKYNKQLTNWI*LLNWSR
Trigger: TCGTGACCAATTTAATAGTCATATCCAGTTAGTGAG...CTGCTTATTGTACTTCTTAATTTTAGGTTTTATACCTGGGAAAGCTGTGACTCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300650.9
ENST00000530849.1
CDS-3UTR CCA 90 bp AGAGTCACAGCTTTCCCAGGTATAAAACCTAAAATTAAGAAGTACAATAAGCAGCTCATTTTATCCATTTaGAGTAGAGTGGCTAAAACA +
Preference number: 4 (lower is better)
Translates to: RVTAFPGIKPKIKKYNKQLILSI*SRVAKT
Trigger: TGTTTTAGCCACTCTACTCCAAATGGATAAAATGAG...CTGCTTATTGTACTTCTTAATTTTAGGTTTTATACCTGGGAAAGCTGTGACTCT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000300650.9
ENST00000530849.1
CDS GCA 90 bp CGGAGGACTGGGGGCATTGGCCACAACACCAGCAACCTCAGACGCTaGCATTATGCTCTCCCGCGCCGCGCCCCCGGGAGGAAAGTGGGG +
Preference number: 5 (lower is better)
Translates to: RRTGGIGHNTSNLRR*HYALPRRAPGRKVG
Trigger: CCCCACTTTCCTCCCGGGGGCGCGGCGCGGGAGAGCATAATGGCAGCGTCTGAGGTTGCTGGTGTTGTGGCCAATGCCCCCAGTCCTCCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000531287.5
ENST00000531452.5
CDS GCA 90 bp GACTGGATGGAGGCTCTCCCGAAGGCTTGTGTCCCCCTCCTCTCCTaGTGTGCTGGCCACATCCTTCAAATCAGACTGAGACCCACTGCC +
Preference number: 5 (lower is better)
Translates to: DWMEALPKACVPLLS*CAGHILQIRLRPTA
Trigger: GGCAGTGGGTCTCAGTCTGATTTGAAGGATGTGGCCAGCACAGCAGGAGAGGAGGGGGACACAAGCCTTCGGGAGAGCCTCCATCCAGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300650.9
ENST00000529869.1
ENST00000531452.5
ENST00000534428.5
CDS GCA 90 bp AAGGAGCGGGGATCTGCACTGGGCATAACCATGGGCATTGTGACCTaGCCAATGGAGAAGGGCATCCGAGGAGCCAGAGAGGGACTGGGT +
Preference number: 5 (lower is better)
Translates to: KERGSALGITMGIVT*PMEKGIRGAREGLG
Trigger: ACCCAGTCCCTCTCTGGCTCCTCGGATGCCCTTCTCCATTGGGCAGGTCACAATGCCCATGGTTATGCCCAGTGCAGATCCCCGCTCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000300650.9
ENST00000530849.1
ENST00000531287.5
ENST00000531452.5
ENST00000534709.1
CDS CCA 90 bp GGCAAGCTGCTTAGTATGGCACCCTGCCTTAAGAGACCGAGTGACTaGATGGAGGCTCTCCCGAAGGCTTGTGTCCCCCTCCTCTCCTGC +
Preference number: 5 (lower is better)
Translates to: GKLLSMAPCLKRPSD*MEALPKACVPLLSC
Trigger: GCAGGAGAGGAGGGGGACACAAGCCTTCGGGAGAGCCTCCATCCAGTCACTCGGTCTCTTAAGGCAGGGTGCCATACTAAGCAGCTTGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300650.9
ENST00000529869.1
ENST00000531452.5
ENST00000534428.5
CDS CCA 90 bp GGAGGCTCTCCCGAAGGCTTGTGTCCCCCTCCTCTCCTGCTGTGCTaGCCACATCCTTCAAATCAGACTGAGACCCACTGCCAGAAAGAC +
Preference number: 5 (lower is better)
Translates to: GGSPEGLCPPPLLLC*PHPSNQTETHCQKD
Trigger: GTCTTTCTGGCAGTGGGTCTCAGTCTGATTTGAAGGATGTGGCCAGCACAGCAGGAGAGGAGGGGGACACAAGCCTTCGGGAGAGCCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300650.9
ENST00000529869.1
ENST00000531452.5
ENST00000534428.5
CDS GCA 90 bp GATGGAGGCTCTCCCGAAGGCTTGTGTCCCCCTCCTCTCCTGCTGTaGTGGCCACATCCTTCAAATCAGACTGAGACCCACTGCCAGAAA +
Preference number: 5 (lower is better)
Translates to: DGGSPEGLCPPPLLL*WPHPSNQTETHCQK
Trigger: TTTCTGGCAGTGGGTCTCAGTCTGATTTGAAGGATGTGGCCAGCACAGCAGGAGAGGAGGGGGACACAAGCCTTCGGGAGAGCCTCCATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300650.9
ENST00000529869.1
ENST00000531452.5
ENST00000534428.5
CDS CCA 90 bp CGGGTCAGCAGCTTCTCCAGGATCTTCTCCAGTTTGTCTACTGGTTaGGGCCGGGGAGTTTCAGCAGAAGCCTTAACACCGCCCAAGCCT +
Preference number: 5 (lower is better)
Translates to: RVSSFSRIFSSLSTG*GRGVSAEALTPPKP
Trigger: AGGCTTGGGCGGTGTTAAGGCTTCTGCTGAAACTCCCCGGCCCCAACCAGTAGACAAACTGGAGAAGATCCTGGAGAAGCTGCTGACCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000300650.9
ENST00000530849.1
ENST00000531287.5
ENST00000531452.5
ENST00000534709.1
CDS CCA 90 bp CTTGCTGCCACCCGCTCATGTTCTGCCAGTCGTGCAGCAACCAACTaGATAAGTTCCTCCATGGTCAGGCCTGCCATGGTGGTACGTGCT +
Preference number: 5 (lower is better)
Translates to: LAATRSCSASRAATN*ISSSMVRPAMVVRA
Trigger: AGCACGTACCACCATGGCAGGCCTGACCATGGAGGAACTTATCCAGTTGGTTGCTGCACGACTGGCAGAACATGAGCGGGTGGCAGCAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000300650.9
ENST00000524917.5
ENST00000530849.1
ENST00000531287.5
ENST00000531452.5
ENST00000534709.1
CDS GCA 90 bp TGGAGCCTGAGTACTTGCTGCCACCCGCTCATGTTCTGCCAGTCGTaGAGCAACCAACTGGATAAGTTCCTCCATGGTCAGGCCTGCCAT +
Preference number: 5 (lower is better)
Translates to: WSLSTCCHPLMFCQS*SNQLDKFLHGQACH
Trigger: ATGGCAGGCCTGACCATGGAGGAACTTATCCAGTTGGTTGCTGCACGACTGGCAGAACATGAGCGGGTGGCAGCAAGTACTCAGGCTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530849.1
CDS GCA 90 bp CTCTTCAGAGCAATTCCTGGAGGCAAGCTGCTTAGTATGGCACCCTaGCTTAAGAGACCGAGTGACTGGATGGAGGCTCTCCCGAAGGCT +
Preference number: 5 (lower is better)
Translates to: LFRAIPGGKLLSMAP*LKRPSDWMEALPKA
Trigger: AGCCTTCGGGAGAGCCTCCATCCAGTCACTCGGTCTCTTAAGGCAGGGTGCCATACTAAGCAGCTTGCCTCCAGGAATTGCTCTGAAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300650.9
ENST00000529869.1
ENST00000531452.5
CDS GCA 90 bp GGAAAGGGCAGGGTTCAGGATTGGGAAAGACAAGGAGCGGGGATCTaGACTGGGCATAACCATGGGCATTGTGACCTGCCCAATGGAGAA +
Preference number: 5 (lower is better)
Translates to: GKGRVQDWERQGAGI*TGHNHGHCDLPNGE
Trigger: TTCTCCATTGGGCAGGTCACAATGCCCATGGTTATGCCCAGTGCAGATCCCCGCTCCTTGTCTTTCCCAATCCTGAACCCTGCCCTTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000300650.9
ENST00000530849.1
ENST00000531287.5
ENST00000531452.5
ENST00000534709.1
CDS GCA 90 bp AAGTGGCTGAGTACTTGCTGCCACCCGCTCATGTTCTGCCAGTCGTaGAGCAACCAACTGGATAAGTTCCTCCATGGTCAGGCCTGCCAT +
Preference number: 5 (lower is better)
Translates to: KWLSTCCHPLMFCQS*SNQLDKFLHGQACH
Trigger: ATGGCAGGCCTGACCATGGAGGAACTTATCCAGTTGGTTGCTGCACGACTGGCAGAACATGAGCGGGTGGCAGCAAGTACTCAGCCACTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300650.9
ENST00000524917.5
ENST00000531287.5
ENST00000531452.5
ENST00000534709.1
CDS CCA 90 bp AACTTGGGCAGAAGGCAAGAACATTGGGGTACTGATTTGGGCCAGTaGAGCAGGGAACAAGGCCCGGATGCGACCAAGTGGCTGAGTACT +
Preference number: 5 (lower is better)
Translates to: NLGRRQEHWGTDLGQ*SREQGPDATKWLST
Trigger: AGTACTCAGCCACTTGGTCGCATCCGGGCCTTGTTCCCTGCTCCACTGGCCCAAATCAGTACCCCAATGTTCTTGCCTTCTGCCCAAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000300650.9
ENST00000524917.5
ENST00000531287.5
ENST00000531452.5
ENST00000534709.1
CDS CCA 90 bp GGATATGAAACTTGGGCAGAAGGCAAGAACATTGGGGTACTGATTTaGGCCAGTGGAGCAGGGAACAAGGCCCGGATGCGACCAAGTGGC +
Preference number: 5 (lower is better)
Translates to: GYETWAEGKNIGVLI*ASGAGNKARMRPSG
Trigger: GCCACTTGGTCGCATCCGGGCCTTGTTCCCTGCTCCACTGGCCCAAATCAGTACCCCAATGTTCTTGCCTTCTGCCCAAGTTTCATATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000300650.9
ENST00000524917.5
ENST00000531287.5
ENST00000531452.5
ENST00000534709.1
CDS-3UTR CAA 90 bp TTCCCTACAATCTGCATCCCCCAAAGGAATTGCAAGATGAGGGGGAACAGACTGGGAGGACTGGGGGCATaGGCCACAACACCAGCAACC +
Preference number: 5 (lower is better)
Translates to: FPTICIPQRNCKMRGNRLGGLGA*ATTPAT
Trigger: GGTTGCTGGTGTTGTGGCCAATGCCCCCAGTCCTCC...CAGTCTGTTCCCCCTCATCTTGCAATTCCTTTGGGGGATGCAGATTGTAGGGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000300650.9
ENST00000530849.1
ENST00000531452.5
CDS-3UTR CAA 90 bp AGGCTTTCGGTAAGCAAGGCATCTGGTTGGACAGTGGGTGAGCACCAGGCTTTACAGTTTGTCTACTGGTaGGGGCCGGGGAGTTTCAGC +
Preference number: 5 (lower is better)
Translates to: RLSVSKASGWTVGEHQALQFVYW*GPGSFS
Trigger: GCTGAAACTCCCCGGCCCCAACCAGTAGACAAACTG...TAAAGCCTGGTGCTCACCCACTGTCCAACCAGATGCCTTGCTTACCGAAAGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300650.9
ENST00000530849.1
ENST00000531452.5
CDS-3UTR CAA 90 bp AGGCTTTCGGTAAGCAAGGCATCTGGTTGGACAGTGGGTGAGCACCAGGCTTTACTGGAGCCTGAGTACTaGCTGCCACCCGCTCATGTT +
Preference number: 5 (lower is better)
Translates to: RLSVSKASGWTVGEHQALLEPEY*LPPAHV
Trigger: AACATGAGCGGGTGGCAGCAAGTACTCAGGCTCCAG...TAAAGCCTGGTGCTCACCCACTGTCCAACCAGATGCCTTGCTTACCGAAAGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530849.1
CDS CCA 90 bp GGGGATTTCTCTTCAGAGCAATTCCTGGAGGCAAGCTGCTTAGTATaGCACCCTGCCTTAAGAGACCGAGTGACTGGATGGAGGCTCTCC +
Preference number: 5 (lower is better)
Translates to: GDFSSEQFLEASCLV*HPALRDRVTGWRLS
Trigger: GGAGAGCCTCCATCCAGTCACTCGGTCTCTTAAGGCAGGGTGCCATACTAAGCAGCTTGCCTCCAGGAATTGCTCTGAAGAGAAATCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300650.9
ENST00000529869.1
ENST00000531452.5
CDS-3UTR CAA 90 bp AGGCTTTCGGTAAGCAAGGCATCTGGTTGGACAGTGGGTGAGCACCAGGCTTTACAAGTGGCTGAGTACTaGCTGCCACCCGCTCATGTT +
Preference number: 5 (lower is better)
Translates to: RLSVSKASGWTVGEHQALQVAEY*LPPAHV
Trigger: AACATGAGCGGGTGGCAGCAAGTACTCAGCCACTTG...TAAAGCCTGGTGCTCACCCACTGTCCAACCAGATGCCTTGCTTACCGAAAGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300650.9
ENST00000531452.5
CDS TCA 90 bp TCCCCCTCCTCTCCTGCTGTGCTGGCCACATCCTTCAAATCAGACTaGGACCCACTGCCAGAAAGACAAAGGGCTGTGGCTATCAAGTTT +
Preference number: 5 (lower is better)
Translates to: SPSSPAVLATSFKSD*DPLPERQRAVAIKF
Trigger: AAACTTGATAGCCACAGCCCTTTGTCTTTCTGGCAGTGGGTCTCAGTCTGATTTGAAGGATGTGGCCAGCACAGCAGGAGAGGAGGGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300650.9
ENST00000529869.1
ENST00000531452.5
ENST00000534428.5
CDS TCA 90 bp TTCCAGGATATGAAACTTGGGCAGAAGGCAAGAACATTGGGGTACTaGTTTGGGCCAGTGGAGCAGGGAACAAGGCCCGGATGCGACCAA +
Preference number: 5 (lower is better)
Translates to: FQDMKLGQKARTLGY*FGPVEQGTRPGCDQ
Trigger: TTGGTCGCATCCGGGCCTTGTTCCCTGCTCCACTGGCCCAAATCAGTACCCCAATGTTCTTGCCTTCTGCCCAAGTTTCATATCCTGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000300650.9
ENST00000524917.5
ENST00000531287.5
ENST00000531452.5
ENST00000534709.1
CDS CCA 90 bp TGGGTACACGCCATTGGATGCAGCTCACTGGGCTGGACGAGTTTCTaGCACATTAGACATAGCTTACAGGTGGCTGGAGCATGTGAAGAC +
Preference number: 5 (lower is better)
Translates to: WVHAIGCSSLGWTSF*HIRHSLQVAGACED
Trigger: GTCTTCACATGCTCCAGCCACCTGTAAGCTATGTCTAATGTGCCAGAAACTCGTCCAGCCCAGTGAGCTGCATCCAATGGCGTGTACCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300650.9
ENST00000524917.5
ENST00000531287.5
ENST00000531452.5
ENST00000534709.1
CDS-3UTR CAA 90 bp TTCCCTACAATCTGCATCCCCCAAAGGAATTGCAAGATGAGGGGGAACAGACTGGGAAGGCTGCTCAGCTaGGCTCCGTTCCTCACTAAC +
Preference number: 5 (lower is better)
Translates to: FPTICIPQRNCKMRGNRLGRLLS*APFLTN
Trigger: GTTAGTGAGGAACGGAGCCAAGCTGAGCAGCCTTCC...CAGTCTGTTCCCCCTCATCTTGCAATTCCTTTGGGGGATGCAGATTGTAGGGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000300650.9
ENST00000530849.1
ENST00000531452.5
CDS GCA 90 bp GAGGTTTGTGGGGATTTCTCTTCAGAGCAATTCCTGGAGGCAAGCTaGTTAGTATGGCACCCTGCCTTAAGAGACCGAGTGACTGGATGG +
Preference number: 5 (lower is better)
Translates to: EVCGDFSSEQFLEAS*LVWHPALRDRVTGW
Trigger: CCATCCAGTCACTCGGTCTCTTAAGGCAGGGTGCCATACTAAGCAGCTTGCCTCCAGGAATTGCTCTGAAGAGAAATCCCCACAAACCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300650.9
ENST00000529869.1
ENST00000531452.5
CDS GCA 90 bp CAGTCGTGCAGCAACCAACTGGATAAGTTCCTCCATGGTCAGGCCTaGCATGGTGGTACGTGCTGTCTTGATCTGCTGAAGAATGTTGGT +
Preference number: 5 (lower is better)
Translates to: QSCSNQLDKFLHGQA*HGGTCCLDLLKNVG
Trigger: ACCAACATTCTTCAGCAGATCAAGACAGCACGTACCACCATGGCAGGCCTGACCATGGAGGAACTTATCCAGTTGGTTGCTGCACGACTG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000300650.9
ENST00000524917.5
ENST00000530849.1
ENST00000531287.5
ENST00000531452.5
ENST00000534709.1
CDS-3UTR CAA 90 bp AGAAGCTTGTGGGGTACATGGAGGAATTGGGACCTGGTTATGTTGTTATTCTCGGGGCAGGGTTCAGGATaGGGAAAGACAAGGAGCGGG +
Preference number: 5 (lower is better)
Translates to: RSLWGTWRNWDLVMLLFSGQGSG*GKTRSG
Trigger: CCCGCTCCTTGTCTTTCCCAATCCTGAACCCTGCCC...CGAGAATAACAACATAACCAGGTCCCAATTCCTCCATGTACCCCACAAGCTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300650.9
ENST00000530849.1
CDS-3UTR CAA 90 bp AACATCATCTTCCCTACAATCTGCATCCCCCAAAGGAATTGCAAGATGAGGGGGGTCATCTGGGCCTTATaGCACTGTGGGAACCGGGTC +
Preference number: 5 (lower is better)
Translates to: NIIFPTICIPQRNCKMRGVIWAL*HCGNRV
Trigger: GACCCGGTTCCCACAGTGCAATAAGGCCCAGATGAC...CCCCCTCATCTTGCAATTCCTTTGGGGGATGCAGATTGTAGGGAAGATGATGTT
52% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000300650.9
ENST00000530849.1
ENST00000531452.5
CDS GCA 90 bp AGACAAAGGGCTGTGGCTATCAAGTTTTCTCCTAAAACCACCTGGTaGGCTGCTGAGGTGTCACCTGCTGATGAACCAGGATTCTGCTCT +
Preference number: 5 (lower is better)
Translates to: RQRAVAIKFSPKTTW*AAEVSPADEPGFCS
Trigger: AGAGCAGAATCCTGGTTCATCAGCAGGTGACACCTCAGCAGCGCACCAGGTGGTTTTAGGAGAAAACTTGATAGCCACAGCCCTTTGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300650.9
ENST00000529869.1
ENST00000531452.5
ENST00000534428.5
CDS CCA 90 bp GAAAGACAAAGGGCTGTGGCTATCAAGTTTTCTCCTAAAACCACCTaGTGCGCTGCTGAGGTGTCACCTGCTGATGAACCAGGATTCTGC +
Preference number: 5 (lower is better)
Translates to: ERQRAVAIKFSPKTT*CAAEVSPADEPGFC
Trigger: GCAGAATCCTGGTTCATCAGCAGGTGACACCTCAGCAGCGCACCAGGTGGTTTTAGGAGAAAACTTGATAGCCACAGCCCTTTGTCTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300650.9
ENST00000529869.1
ENST00000531452.5
ENST00000534428.5
CDS CCA 90 bp ACTCCTTGTGCAATACATGGGTACACGCCATTGGATGCAGCTCACTaGGCTGGACGAGTTTCTGGCACATTAGACATAGCTTACAGGTGG +
Preference number: 5 (lower is better)
Translates to: TPCAIHGYTPLDAAH*AGRVSGTLDIAYRW
Trigger: CCACCTGTAAGCTATGTCTAATGTGCCAGAAACTCGTCCAGCCCAGTGAGCTGCATCCAATGGCGTGTACCCATGTATTGCACAAGGAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300650.9
ENST00000530849.1
ENST00000531287.5
ENST00000531452.5
ENST00000534709.1
CDS-3UTR CAA 90 bp TTCCCTACAATCTGCATCCCCCAAAGGAATTGCAAGATGAGGGGGAACAGACTGGTCTCCCACTCCTGTTaGGAACGAACTGTCTCCAGT +
Preference number: 5 (lower is better)
Translates to: FPTICIPQRNCKMRGNRLVSHSC*ERTVSS
Trigger: ACTGGAGACAGTTCGTTCCAAACAGGAGTGGGAGAC...CAGTCTGTTCCCCCTCATCTTGCAATTCCTTTGGGGGATGCAGATTGTAGGGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000300650.9
ENST00000530849.1
ENST00000531452.5
CDS-3UTR CAA 90 bp AGAAGCTTGTGGGGTACATGGAGGAATTGGGACCTGGTTATGTTGTTATTCTCGCAGTTTGTCTACTGGTaGGGGCCGGGGAGTTTCAGC +
Preference number: 5 (lower is better)
Translates to: RSLWGTWRNWDLVMLLFSQFVYW*GPGSFS
Trigger: GCTGAAACTCCCCGGCCCCAACCAGTAGACAAACTG...CGAGAATAACAACATAACCAGGTCCCAATTCCTCCATGTACCCCACAAGCTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300650.9
ENST00000530849.1
CDS-3UTR CAA 90 bp AACATCATCTTCCCTACAATCTGCATCCCCCAAAGGAATTGCAAGATGAGGGGGCATTGGGGTACTGATTaGGGCCAGTGGAGCAGGGAA +
Preference number: 5 (lower is better)
Translates to: NIIFPTICIPQRNCKMRGHWGTD*GQWSRE
Trigger: TTCCCTGCTCCACTGGCCCAAATCAGTACCCCAATG...CCCCCTCATCTTGCAATTCCTTTGGGGGATGCAGATTGTAGGGAAGATGATGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000300650.9
ENST00000531452.5
CDS-3UTR CAA 90 bp AGGCTTTCGGTAAGCAAGGCATCTGGTTGGACAGTGGGTGAGCACCAGGCTTTACAAGTGTCATTTGTGTaGGTCTGGGCCCAGAATTTG +
Preference number: 5 (lower is better)
Translates to: RLSVSKASGWTVGEHQALQVSFV*VWAQNL
Trigger: CAAATTCTGGGCCCAGACCAACACAAATGACACTTG...TAAAGCCTGGTGCTCACCCACTGTCCAACCAGATGCCTTGCTTACCGAAAGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300650.9
ENST00000530849.1
ENST00000531452.5
CDS-3UTR CAA 90 bp AGGCTTTCGGTAAGCAAGGCATCTGGTTGGACAGTGGGTGAGCACCAGGCTTTAAGGTCACCAAACAACTaGGTTGTGAACCAACTGCCT +
Preference number: 5 (lower is better)
Translates to: RLSVSKASGWTVGEHQALRSPNN*VVNQLP
Trigger: AGGCAGTTGGTTCACAACCAAGTTGTTTGGTGACCT...TAAAGCCTGGTGCTCACCCACTGTCCAACCAGATGCCTTGCTTACCGAAAGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300650.9
ENST00000530849.1
CDS GCA 90 bp ACCTGGTGCGCTGCTGAGGTGTCACCTGCTGATGAACCAGGATTCTaGTCTGAGTGCTCCAAATGGACATTTCTGTTATTCTCCTTGGTT +
Preference number: 5 (lower is better)
Translates to: TWCAAEVSPADEPGF*SECSKWTFLLFSLV
Trigger: AACCAAGGAGAATAACAGAAATGTCCATTTGGAGCACTCAGAGCAGAATCCTGGTTCATCAGCAGGTGACACCTCAGCAGCGCACCAGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300650.9
ENST00000529869.1
ENST00000531452.5
ENST00000534428.5
CDS GCA 90 bp CAACTGGATAAGTTCCTCCATGGTCAGGCCTGCCATGGTGGTACGTaGTGTCTTGATCTGCTGAAGAATGTTGGTCATCTGGGCCTTATT +
Preference number: 5 (lower is better)
Translates to: QLDKFLHGQACHGGT*CLDLLKNVGHLGLI
Trigger: AATAAGGCCCAGATGACCAACATTCTTCAGCAGATCAAGACAGCACGTACCACCATGGCAGGCCTGACCATGGAGGAACTTATCCAGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000300650.9
ENST00000524917.5
ENST00000530849.1
ENST00000531287.5
ENST00000531452.5
ENST00000534709.1
CDS CCA 90 bp TTGATCATCATCCTGATCCACTCGGACTCCTTCAACCCCATTTGCTaGAGACACTACAGGTCGGAAATCCAAGCTTGTGTCCCTGTTACC +
Preference number: 5 (lower is better)
Translates to: LIIILIHSDSFNPIC*RHYRSEIQACVPVT
Trigger: GGTAACAGGGACACAAGCTTGGATTTCCGACCTGTAGTGTCTCCAGCAAATGGGGTTGAAGGAGTCCGAGTGGATCAGGATGATGATCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300650.9
ENST00000529869.1
ENST00000531452.5
CDS-3UTR CAA 90 bp AACATCATCTTCCCTACAATCTGCATCCCCCAAAGGAATTGCAAGATGAGGGGGGTCTCCCACTCCTGTTaGGAACGAACTGTCTCCAGT +
Preference number: 5 (lower is better)
Translates to: NIIFPTICIPQRNCKMRGVSHSC*ERTVSS
Trigger: ACTGGAGACAGTTCGTTCCAAACAGGAGTGGGAGAC...CCCCCTCATCTTGCAATTCCTTTGGGGGATGCAGATTGTAGGGAAGATGATGTT
50% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000300650.9
ENST00000530849.1
ENST00000531452.5
CDS-3UTR CAA 90 bp AACATCATCTTCCCTACAATCTGCATCCCCCAAAGGAATTGCAAGATGAGGGGGAGTGGGAGTAGGGATTaGAGGAAGGCTGCTCAGCTT +
Preference number: 5 (lower is better)
Translates to: NIIFPTICIPQRNCKMRGSGSRD*RKAAQL
Trigger: AAGCTGAGCAGCCTTCCTCAAATCCCTACTCCCACT...CCCCCTCATCTTGCAATTCCTTTGGGGGATGCAGATTGTAGGGAAGATGATGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000300650.9
ENST00000530849.1
ENST00000531452.5
CDS-3UTR CAA 90 bp TTCCCTACAATCTGCATCCCCCAAAGGAATTGCAAGATGAGGGGGAACAGACTGCAGAGAGGGACTGGGTaGAAACACCTGAAGCATGAA +
Preference number: 5 (lower is better)
Translates to: FPTICIPQRNCKMRGNRLQRGTG*KHLKHE
Trigger: TTCATGCTTCAGGTGTTTCAACCCAGTCCCTCTCTG...CAGTCTGTTCCCCCTCATCTTGCAATTCCTTTGGGGGATGCAGATTGTAGGGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000300650.9
ENST00000530849.1
ENST00000531452.5
CDS-3UTR CAA 90 bp AACATCATCTTCCCTACAATCTGCATCCCCCAAAGGAATTGCAAGATGAGGGGGAGGGTGGACAGAAGCTaGTGGGGTACATGGAGGAAT +
Preference number: 5 (lower is better)
Translates to: NIIFPTICIPQRNCKMRGRVDRS*WGTWRN
Trigger: ATTCCTCCATGTACCCCACAAGCTTCTGTCCACCCT...CCCCCTCATCTTGCAATTCCTTTGGGGGATGCAGATTGTAGGGAAGATGATGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000300650.9
ENST00000530849.1
CDS GCA 90 bp CTCCTGCTGTGCTGGCCACATCCTTCAAATCAGACTGAGACCCACTaGCAGAAAGACAAAGGGCTGTGGCTATCAAGTTTTCTCCTAAAA +
Preference number: 5 (lower is better)
Translates to: LLLCWPHPSNQTETH*QKDKGLWLSSFLLK
Trigger: TTTTAGGAGAAAACTTGATAGCCACAGCCCTTTGTCTTTCTGGCAGTGGGTCTCAGTCTGATTTGAAGGATGTGGCCAGCACAGCAGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300650.9
ENST00000529869.1
ENST00000531452.5
ENST00000534428.5
CDS GCA 90 bp ATCTTGATCATCATCCTGATCCACTCGGACTCCTTCAACCCCATTTaGTGGAGACACTACAGGTCGGAAATCCAAGCTTGTGTCCCTGTT +
Preference number: 5 (lower is better)
Translates to: ILIIILIHSDSFNPI*WRHYRSEIQACVPV
Trigger: AACAGGGACACAAGCTTGGATTTCCGACCTGTAGTGTCTCCAGCAAATGGGGTTGAAGGAGTCCGAGTGGATCAGGATGATGATCAAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300650.9
ENST00000529869.1
ENST00000531452.5
CDS CCA 90 bp CAGGTCGGAAATCCAAGCTTGTGTCCCTGTTACCTTCCTTTAGGATaGAGGTTTGTGGGGATTTCTCTTCAGAGCAATTCCTGGAGGCAA +
Preference number: 5 (lower is better)
Translates to: QVGNPSLCPCYLPLG*RFVGISLQSNSWRQ
Trigger: TTGCCTCCAGGAATTGCTCTGAAGAGAAATCCCCACAAACCTCCATCCTAAAGGAAGGTAACAGGGACACAAGCTTGGATTTCCGACCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300650.9
ENST00000529869.1
ENST00000531452.5
CDS-3UTR CAA 90 bp AACATCATCTTCCCTACAATCTGCATCCCCCAAAGGAATTGCAAGATGAGGGGGTTCTGTGCAGAGTCTTaGGTGCTTAGACCATCTGGG +
Preference number: 5 (lower is better)
Translates to: NIIFPTICIPQRNCKMRGFCAES*VLRPSG
Trigger: CCCAGATGGTCTAAGCACCAAAGACTCTGCACAGAA...CCCCCTCATCTTGCAATTCCTTTGGGGGATGCAGATTGTAGGGAAGATGATGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000300650.9
ENST00000530849.1
ENST00000531452.5
CDS-3UTR CAA 90 bp CAGAAGCTTGTGGGGTACATGGAGGAATTGGGACCTGGTTATGTTGTTATTCTCGTCTCCCACTCCTGTTaGGAACGAACTGTCTCCAGT +
Preference number: 5 (lower is better)
Translates to: QKLVGYMEELGPGYVVILVSHSC*ERTVSS
Trigger: ACTGGAGACAGTTCGTTCCAAACAGGAGTGGGAGAC...GAGAATAACAACATAACCAGGTCCCAATTCCTCCATGTACCCCACAAGCTTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300650.9
ENST00000530849.1
CDS-3UTR CAA 90 bp GTATTTGAAAACAGCCCTGGGCAGGGATATCATAATTTCAAGGCCAAACTAAACGGGCAGGGTTCAGGATaGGGAAAGACAAGGAGCGGG +
Preference number: 5 (lower is better)
Translates to: VFENSPGQGYHNFKAKLNGQGSG*GKTRSG
Trigger: CCCGCTCCTTGTCTTTCCCAATCCTGAACCCTGCCC...GTTTAGTTTGGCCTTGAAATTATGATATCCCTGCCCAGGGCTGTTTTCAAATAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300650.9
ENST00000530849.1
ENST00000531452.5
CDS-3UTR CAA 90 bp CCCTACAATCTGCATCCCCCAAAGGAATTGCAAGATGAGGGGGAACAGACTGTTGTCTGGGCCCAGAATTaGATACACTCCTTGTGCAAT +
Preference number: 5 (lower is better)
Translates to: PYNLHPPKELQDEGEQTVVWAQN*IHSLCN
Trigger: ATTGCACAAGGAGTGTATCAAATTCTGGGCCCAGAC...AACAGTCTGTTCCCCCTCATCTTGCAATTCCTTTGGGGGATGCAGATTGTAGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000300650.9
ENST00000530849.1
ENST00000531452.5
CDS-3UTR CAA 90 bp TTCCCTACAATCTGCATCCCCCAAAGGAATTGCAAGATGAGGGGGAACAGACTGGGGTACATGGAGGAATaGGGACCTGGTTATGTTGTT +
Preference number: 5 (lower is better)
Translates to: FPTICIPQRNCKMRGNRLGYMEE*GPGYVV
Trigger: AACAACATAACCAGGTCCCAATTCCTCCATGTACCC...CAGTCTGTTCCCCCTCATCTTGCAATTCCTTTGGGGGATGCAGATTGTAGGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000300650.9
ENST00000530849.1
CDS-3UTR CAA 90 bp AGAAGCTTGTGGGGTACATGGAGGAATTGGGACCTGGTTATGTTGTTATTCTCGAGGGTGGACAGAAGCTaGTGGGGTACATGGAGGAAT +
Preference number: 5 (lower is better)
Translates to: RSLWGTWRNWDLVMLLFSRVDRS*WGTWRN
Trigger: ATTCCTCCATGTACCCCACAAGCTTCTGTCCACCCT...CGAGAATAACAACATAACCAGGTCCCAATTCCTCCATGTACCCCACAAGCTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300650.9
ENST00000530849.1
CDS-3UTR CAA 90 bp CCCTACAATCTGCATCCCCCAAAGGAATTGCAAGATGAGGGGGAACAGACTGTTGAGGACTTCACAATGTaGGCCTGTCAGAGCTTGATT +
Preference number: 5 (lower is better)
Translates to: PYNLHPPKELQDEGEQTVEDFTM*ACQSLI
Trigger: AATCAAGCTCTGACAGGCCAACATTGTGAAGTCCTC...AACAGTCTGTTCCCCCTCATCTTGCAATTCCTTTGGGGGATGCAGATTGTAGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000300650.9
ENST00000530849.1
CDS-3UTR CAA 90 bp CCCTACAATCTGCATCCCCCAAAGGAATTGCAAGATGAGGGGGAACAGACTGTTAGGTCACCAAACAACTaGGTTGTGAACCAACTGCCT +
Preference number: 5 (lower is better)
Translates to: PYNLHPPKELQDEGEQTVRSPNN*VVNQLP
Trigger: AGGCAGTTGGTTCACAACCAAGTTGTTTGGTGACCT...AACAGTCTGTTCCCCCTCATCTTGCAATTCCTTTGGGGGATGCAGATTGTAGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000300650.9
ENST00000530849.1
CDS GCA 90 bp AATTTGATACACTCCTTGTGCAATACATGGGTACACGCCATTGGATaGAGCTCACTGGGCTGGACGAGTTTCTGGCACATTAGACATAGC +
Preference number: 5 (lower is better)
Translates to: NLIHSLCNTWVHAIG*SSLGWTSFWHIRHS
Trigger: GCTATGTCTAATGTGCCAGAAACTCGTCCAGCCCAGTGAGCTGCATCCAATGGCGTGTACCCATGTATTGCACAAGGAGTGTATCAAATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300650.9
ENST00000530849.1
ENST00000531287.5
ENST00000531452.5
ENST00000534709.1
CDS GCA 90 bp GAATCAGCTGTCTTAAAGTCAGTACTCAACAGAGGCGAGTTCTTCTaGTTCTGTGCAGAGTCTTTGGTGCTTAGACCATCTGGGAGACCT +
Preference number: 5 (lower is better)
Translates to: ESAVLKSVLNRGEFF*FCAESLVLRPSGRP
Trigger: AGGTCTCCCAGATGGTCTAAGCACCAAAGACTCTGCACAGAAGCAGAAGAACTCGCCTCTGTTGAGTACTGACTTTAAGACAGCTGATTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000530849.1
ENST00000531287.5
CDS-3UTR CAA 90 bp AAATATAGAGTTTTAGAAATCTTGAACCCGCGCTTCCTGTTCACATCAGTTTCTGGAGGACTGGGGGCATaGGCCACAACACCAGCAACC +
Preference number: 5 (lower is better)
Translates to: KYRVLEILNPRFLFTSVSGGLGA*ATTPAT
Trigger: GGTTGCTGGTGTTGTGGCCAATGCCCCCAGTCCTCC...AGAAACTGATGTGAACAGGAAGCGCGGGTTCAAGATTTCTAAAACTCTATATTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000300650.9
ENST00000530849.1
ENST00000531452.5
CDS-3UTR CAA 90 bp AGAAGCTTGTGGGGTACATGGAGGAATTGGGACCTGGTTATGTTGTTATTCTCGTTCTGTGCAGAGTCTTaGGTGCTTAGACCATCTGGG +
Preference number: 5 (lower is better)
Translates to: RSLWGTWRNWDLVMLLFSFCAES*VLRPSG
Trigger: CCCAGATGGTCTAAGCACCAAAGACTCTGCACAGAA...CGAGAATAACAACATAACCAGGTCCCAATTCCTCCATGTACCCCACAAGCTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300650.9
ENST00000530849.1
CDS-3UTR CAA 90 bp GTATTTGAAAACAGCCCTGGGCAGGGATATCATAATTTCAAGGCCAAACTAAACCATGGGTACACGCCATaGGATGCAGCTCACTGGGCT +
Preference number: 5 (lower is better)
Translates to: VFENSPGQGYHNFKAKLNHGYTP*DAAHWA
Trigger: AGCCCAGTGAGCTGCATCCAATGGCGTGTACCCATG...GTTTAGTTTGGCCTTGAAATTATGATATCCCTGCCCAGGGCTGTTTTCAAATAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300650.9
ENST00000530849.1
ENST00000531452.5
CDS-3UTR CAA 90 bp CTCATTTTATCCATTTGGAGTAGAGTGGCTAAAACAATACTGAGGCTTCTGGAGCATGGGTACACGCCATaGGATGCAGCTCACTGGGCT +
Preference number: 5 (lower is better)
Translates to: LILSIWSRVAKTILRLLEHGYTP*DAAHWA
Trigger: AGCCCAGTGAGCTGCATCCAATGGCGTGTACCCATG...CTCCAGAAGCCTCAGTATTGTTTTAGCCACTCTACTCCAAATGGATAAAATGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300650.9
ENST00000530849.1
ENST00000531452.5
CDS-3UTR CAA 90 bp ATTTTATCCATTTGGAGTAGAGTGGCTAAAACAATACTGAGGCTTCTGGAGGCTCATGGGTACACGCCATaGGATGCAGCTCACTGGGCT +
Preference number: 5 (lower is better)
Translates to: ILSIWSRVAKTILRLLEAHGYTP*DAAHWA
Trigger: AGCCCAGTGAGCTGCATCCAATGGCGTGTACCCATG...AGCCTCCAGAAGCCTCAGTATTGTTTTAGCCACTCTACTCCAAATGGATAAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300650.9
ENST00000530849.1
ENST00000531452.5
CDS-3UTR CAA 90 bp AGGCTTTCGGTAAGCAAGGCATCTGGTTGGACAGTGGGTGAGCACCAGGCTTTAGTTTTTATATTGTATTaGAAAACAGCCCTGGGCAGG +
Preference number: 5 (lower is better)
Translates to: RLSVSKASGWTVGEHQALVFILY*KTALGR
Trigger: CCTGCCCAGGGCTGTTTTCAAATACAATATAAAAAC...TAAAGCCTGGTGCTCACCCACTGTCCAACCAGATGCCTTGCTTACCGAAAGCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000300650.9
ENST00000530849.1
ENST00000531452.5
CDS GCA 90 bp TTGGTTATTGTTTGGCTACTTACACTCAACAGAGGCGAGTTCTTCTaGTTCTGTGCAGAGTCTTTGGTGCTTAGACCATCTGGGAGACCT +
Preference number: 5 (lower is better)
Translates to: LVIVWLLTLNRGEFF*FCAESLVLRPSGRP
Trigger: AGGTCTCCCAGATGGTCTAAGCACCAAAGACTCTGCACAGAAGCAGAAGAACTCGCCTCTGTTGAGTGTAAGTAGCCAAACAATAACCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300650.9
ENST00000529869.1
ENST00000531452.5
ENST00000534428.5
CDS GCA 90 bp GCTGCTGAGGTGTCACCTGCTGATGAACCAGGATTCTGCTCTGAGTaGTCCAAATGGACATTTCTGTTATTCTCCTTGGTTATTGTTTGG +
Preference number: 5 (lower is better)
Translates to: AAEVSPADEPGFCSE*SKWTFLLFSLVIVW
Trigger: CCAAACAATAACCAAGGAGAATAACAGAAATGTCCATTTGGAGCACTCAGAGCAGAATCCTGGTTCATCAGCAGGTGACACCTCAGCAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300650.9
ENST00000529869.1
ENST00000531452.5
ENST00000534428.5
CDS-3UTR CAA 90 bp AGAGTCACAGCTTTCCCAGGTATAAAACCTAAAATTAAGAAGTACAATAAGCAGGGAGGACTGGGGGCATaGGCCACAACACCAGCAACC +
Preference number: 5 (lower is better)
Translates to: RVTAFPGIKPKIKKYNKQGGLGA*ATTPAT
Trigger: GGTTGCTGGTGTTGTGGCCAATGCCCCCAGTCCTCC...CTGCTTATTGTACTTCTTAATTTTAGGTTTTATACCTGGGAAAGCTGTGACTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000300650.9
ENST00000530849.1
CDS-3UTR CAA 90 bp AGGCTTTCGGTAAGCAAGGCATCTGGTTGGACAGTGGGTGAGCACCAGGCTTTATATTCTCCTTGGTTATaGTTTGGCTACTTACACTCA +
Preference number: 5 (lower is better)
Translates to: RLSVSKASGWTVGEHQALYSPWL*FGYLHS
Trigger: TGAGTGTAAGTAGCCAAACAATAACCAAGGAGAATA...TAAAGCCTGGTGCTCACCCACTGTCCAACCAGATGCCTTGCTTACCGAAAGCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300650.9
ENST00000531452.5
CDS-3UTR CAA 90 bp AGGCTTTCGGTAAGCAAGGCATCTGGTTGGACAGTGGGTGAGCACCAGGCTTTATCTCTATCTTCTTCTTaGTTTCTTCCCGCTTTATTG +
Preference number: 5 (lower is better)
Translates to: RLSVSKASGWTVGEHQALSLSSS*FLPALL
Trigger: CAATAAAGCGGGAAGAAACAAAGAAGAAGATAGAGA...TAAAGCCTGGTGCTCACCCACTGTCCAACCAGATGCCTTGCTTACCGAAAGCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300650.9
ENST00000530849.1
ENST00000531452.5
CDS-3UTR CAA 90 bp CTAGGTGGTTTTTATATTGTATTTGAAAACAGCCCTGGGCAGGGATATCATAATGGGCAGGGTTCAGGATaGGGAAAGACAAGGAGCGGG +
Preference number: 5 (lower is better)
Translates to: LGGFYIVFENSPGQGYHNGQGSG*GKTRSG
Trigger: CCCGCTCCTTGTCTTTCCCAATCCTGAACCCTGCCC...ATTATGATATCCCTGCCCAGGGCTGTTTTCAAATACAATATAAAAACCACCTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000300650.9
ENST00000530849.1
ENST00000531452.5
CDS-3UTR CAA 90 bp CTCATTTTATCCATTTGGAGTAGAGTGGCTAAAACAATACTGAGGCTTCTGGAGAGGATCTTCTCCAGTTaGTCTACTGGTTGGGGCCGG +
Preference number: 5 (lower is better)
Translates to: LILSIWSRVAKTILRLLERIFSS*STGWGR
Trigger: CCGGCCCCAACCAGTAGACAAACTGGAGAAGATCCT...CTCCAGAAGCCTCAGTATTGTTTTAGCCACTCTACTCCAAATGGATAAAATGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000300650.9
ENST00000530849.1
ENST00000531452.5
CDS-3UTR CAA 90 bp AGTCTCATTTTATCCATTTGGAGTAGAGTGGCTAAAACAATACTGAGGCTTCTGGTCATCTGGGCCTTATaGCACTGTGGGAACCGGGTC +
Preference number: 5 (lower is better)
Translates to: SLILSIWSRVAKTILRLLVIWAL*HCGNRV
Trigger: GACCCGGTTCCCACAGTGCAATAAGGCCCAGATGAC...CAGAAGCCTCAGTATTGTTTTAGCCACTCTACTCCAAATGGATAAAATGAGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300650.9
ENST00000530849.1
ENST00000531452.5
CDS-3UTR CAA 90 bp GTATTTGAAAACAGCCCTGGGCAGGGATATCATAATTTCAAGGCCAAACTAAACCAAGTGGCTGAGTACTaGCTGCCACCCGCTCATGTT +
Preference number: 5 (lower is better)
Translates to: VFENSPGQGYHNFKAKLNQVAEY*LPPAHV
Trigger: AACATGAGCGGGTGGCAGCAAGTACTCAGCCACTTG...GTTTAGTTTGGCCTTGAAATTATGATATCCCTGCCCAGGGCTGTTTTCAAATAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300650.9
ENST00000531452.5
CDS-3UTR CAA 90 bp CAGAAGCTTGTGGGGTACATGGAGGAATTGGGACCTGGTTATGTTGTTATTCTCCAAGTGTCATTTGTGTaGGTCTGGGCCCAGAATTTG +
Preference number: 5 (lower is better)
Translates to: QKLVGYMEELGPGYVVILQVSFV*VWAQNL
Trigger: CAAATTCTGGGCCCAGACCAACACAAATGACACTTG...GAGAATAACAACATAACCAGGTCCCAATTCCTCCATGTACCCCACAAGCTTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300650.9
ENST00000530849.1
CDS-3UTR CAA 90 bp AACATCATCTTCCCTACAATCTGCATCCCCCAAAGGAATTGCAAGATGAGGGGGTGGGACCTGGTTATGTaGTTATTCTCGGACTGTGAA +
Preference number: 5 (lower is better)
Translates to: NIIFPTICIPQRNCKMRGWDLVM*LFSDCE
Trigger: TTCACAGTCCGAGAATAACAACATAACCAGGTCCCA...CCCCCTCATCTTGCAATTCCTTTGGGGGATGCAGATTGTAGGGAAGATGATGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000300650.9
ENST00000530849.1
CDS TCA 90 bp ATTAATCATCGGTCCCACAAAATAACCCAAACAAGACCCAATGACTaGCTGAGAGAAAGCCTCAAGTCTGAGATGAGACGTCTGCCCTCT +
Preference number: 5 (lower is better)
Translates to: INHRSHKITQTRPND*LRESLKSEMRRLPS
Trigger: AGAGGGCAGACGTCTCATCTCAGACTTGAGGCTTTCTCTCAGTCAGTCATTGGGTCTTGTTTGGGTTATTTTGTGGGACCGATGATTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529869.1
CDS-3UTR CAA 90 bp CTAGGTGGTTTTTATATTGTATTTGAAAACAGCCCTGGGCAGGGATATCATAATGGAAGGCTGCTCAGCTaGGCTCCGTTCCTCACTAAC +
Preference number: 5 (lower is better)
Translates to: LGGFYIVFENSPGQGYHNGRLLS*APFLTN
Trigger: GTTAGTGAGGAACGGAGCCAAGCTGAGCAGCCTTCC...ATTATGATATCCCTGCCCAGGGCTGTTTTCAAATACAATATAAAAACCACCTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000300650.9
ENST00000530849.1
ENST00000531452.5
CDS-3UTR CAA 90 bp GTATTTGAAAACAGCCCTGGGCAGGGATATCATAATTTCAAGGCCAAACTAAACAGTGGGAGTAGGGATTaGAGGAAGGCTGCTCAGCTT +
Preference number: 5 (lower is better)
Translates to: VFENSPGQGYHNFKAKLNSGSRD*RKAAQL
Trigger: AAGCTGAGCAGCCTTCCTCAAATCCCTACTCCCACT...GTTTAGTTTGGCCTTGAAATTATGATATCCCTGCCCAGGGCTGTTTTCAAATAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300650.9
ENST00000530849.1
ENST00000531452.5
CDS-3UTR CAA 90 bp AAATATAGAGTTTTAGAAATCTTGAACCCGCGCTTCCTGTTCACATCAGTTTCTCAGTTTGTCTACTGGTaGGGGCCGGGGAGTTTCAGC +
Preference number: 5 (lower is better)
Translates to: KYRVLEILNPRFLFTSVSQFVYW*GPGSFS
Trigger: GCTGAAACTCCCCGGCCCCAACCAGTAGACAAACTG...AGAAACTGATGTGAACAGGAAGCGCGGGTTCAAGATTTCTAAAACTCTATATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000300650.9
ENST00000530849.1
ENST00000531452.5
CDS-3UTR CAA 90 bp CTAGGTGGTTTTTATATTGTATTTGAAAACAGCCCTGGGCAGGGATATCATAATGTCATCTGGGCCTTATaGCACTGTGGGAACCGGGTC +
Preference number: 5 (lower is better)
Translates to: LGGFYIVFENSPGQGYHNVIWAL*HCGNRV
Trigger: GACCCGGTTCCCACAGTGCAATAAGGCCCAGATGAC...ATTATGATATCCCTGCCCAGGGCTGTTTTCAAATACAATATAAAAACCACCTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000300650.9
ENST00000530849.1
ENST00000531452.5
CDS-3UTR CAA 90 bp AGTCTCATTTTATCCATTTGGAGTAGAGTGGCTAAAACAATACTGAGGCTTCTGCATTGGGGTACTGATTaGGGCCAGTGGAGCAGGGAA +
Preference number: 5 (lower is better)
Translates to: SLILSIWSRVAKTILRLLHWGTD*GQWSRE
Trigger: TTCCCTGCTCCACTGGCCCAAATCAGTACCCCAATG...CAGAAGCCTCAGTATTGTTTTAGCCACTCTACTCCAAATGGATAAAATGAGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300650.9
ENST00000531452.5
CDS-3UTR CAA 90 bp CTCATTTTATCCATTTGGAGTAGAGTGGCTAAAACAATACTGAGGCTTCTGGAGAGGGACAAGTGTCATTaGTGTTGGTCTGGGCCCAGA +
Preference number: 5 (lower is better)
Translates to: LILSIWSRVAKTILRLLERDKCH*CWSGPR
Trigger: TCTGGGCCCAGACCAACACAAATGACACTTGTCCCT...CTCCAGAAGCCTCAGTATTGTTTTAGCCACTCTACTCCAAATGGATAAAATGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300650.9
ENST00000530849.1
ENST00000531452.5
CDS-3UTR CAA 90 bp CAGAAGCTTGTGGGGTACATGGAGGAATTGGGACCTGGTTATGTTGTTATTCTCAGAGTTTTAGAAATCTaGAACCCGCGCTTCCTGTTC +
Preference number: 5 (lower is better)
Translates to: QKLVGYMEELGPGYVVILRVLEI*NPRFLF
Trigger: GAACAGGAAGCGCGGGTTCAAGATTTCTAAAACTCT...GAGAATAACAACATAACCAGGTCCCAATTCCTCCATGTACCCCACAAGCTTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300650.9
ENST00000530849.1
CDS-3UTR CAA 90 bp AAACATCATCTTCCCTACAATCTGCATCCCCCAAAGGAATTGCAAGATGAGGGGAGAGTTTTAGAAATCTaGAACCCGCGCTTCCTGTTC +
Preference number: 5 (lower is better)
Translates to: KHHLPYNLHPPKELQDEGRVLEI*NPRFLF
Trigger: GAACAGGAAGCGCGGGTTCAAGATTTCTAAAACTCT...CCCCTCATCTTGCAATTCCTTTGGGGGATGCAGATTGTAGGGAAGATGATGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000300650.9
ENST00000530849.1
ENST00000531452.5
CDS-3UTR CAA 90 bp CCCTACAATCTGCATCCCCCAAAGGAATTGCAAGATGAGGGGGAACAGACTGTTATTCTACAAGTAATTTaGCACAGACATCTCCTCACC +
Preference number: 5 (lower is better)
Translates to: PYNLHPPKELQDEGEQTVILQVI*HRHLLT
Trigger: GGTGAGGAGATGTCTGTGCAAAATTACTTGTAGAAT...AACAGTCTGTTCCCCCTCATCTTGCAATTCCTTTGGGGGATGCAGATTGTAGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000300650.9
ENST00000530849.1
CDS GCA 90 bp AAGCTAAGCAATGTAGTTCTGGCAAACGGACACCAACATCCACGCTaGATTAATCATCGGTCCCACAAAATAACCCAAACAAGACCCAAT +
Preference number: 5 (lower is better)
Translates to: KLSNVVLANGHQHPR*INHRSHKITQTRPN
Trigger: ATTGGGTCTTGTTTGGGTTATTTTGTGGGACCGATGATTAATGCAGCGTGGATGTTGGTGTCCGTTTGCCAGAACTACATTGCTTAGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529869.1
CDS-3UTR CAA 90 bp AGTCTCATTTTATCCATTTGGAGTAGAGTGGCTAAAACAATACTGAGGCTTCTGCTCCTTCAACCCCATTaGCTGGAGACACTACAGGTC +
Preference number: 5 (lower is better)
Translates to: SLILSIWSRVAKTILRLLLLQPH*LETLQV
Trigger: GACCTGTAGTGTCTCCAGCAAATGGGGTTGAAGGAG...CAGAAGCCTCAGTATTGTTTTAGCCACTCTACTCCAAATGGATAAAATGAGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300650.9
ENST00000531452.5
CDS-3UTR CAA 90 bp AGAGTCACAGCTTTCCCAGGTATAAAACCTAAAATTAAGAAGTACAATAAGCAGGGAAGGCTGCTCAGCTaGGCTCCGTTCCTCACTAAC +
Preference number: 5 (lower is better)
Translates to: RVTAFPGIKPKIKKYNKQGRLLS*APFLTN
Trigger: GTTAGTGAGGAACGGAGCCAAGCTGAGCAGCCTTCC...CTGCTTATTGTACTTCTTAATTTTAGGTTTTATACCTGGGAAAGCTGTGACTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300650.9
ENST00000530849.1
CDS-3UTR CAA 90 bp CTCATTTTATCCATTTGGAGTAGAGTGGCTAAAACAATACTGAGGCTTCTGGAGCAGAGAGGGACTGGGTaGAAACACCTGAAGCATGAA +
Preference number: 5 (lower is better)
Translates to: LILSIWSRVAKTILRLLEQRGTG*KHLKHE
Trigger: TTCATGCTTCAGGTGTTTCAACCCAGTCCCTCTCTG...CTCCAGAAGCCTCAGTATTGTTTTAGCCACTCTACTCCAAATGGATAAAATGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300650.9
ENST00000530849.1
ENST00000531452.5
CDS-3UTR CAA 90 bp ATTTTATCCATTTGGAGTAGAGTGGCTAAAACAATACTGAGGCTTCTGGAGGCTCAGAGAGGGACTGGGTaGAAACACCTGAAGCATGAA +
Preference number: 5 (lower is better)
Translates to: ILSIWSRVAKTILRLLEAQRGTG*KHLKHE
Trigger: TTCATGCTTCAGGTGTTTCAACCCAGTCCCTCTCTG...AGCCTCCAGAAGCCTCAGTATTGTTTTAGCCACTCTACTCCAAATGGATAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300650.9
ENST00000530849.1
ENST00000531452.5
CDS-3UTR CAA 90 bp AAATATAGAGTTTTAGAAATCTTGAACCCGCGCTTCCTGTTCACATCAGTTTCTAGGATCTTCTCCAGTTaGTCTACTGGTTGGGGCCGG +
Preference number: 5 (lower is better)
Translates to: KYRVLEILNPRFLFTSVSRIFSS*STGWGR
Trigger: CCGGCCCCAACCAGTAGACAAACTGGAGAAGATCCT...AGAAACTGATGTGAACAGGAAGCGCGGGTTCAAGATTTCTAAAACTCTATATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300650.9
ENST00000530849.1
ENST00000531452.5
CDS-3UTR CAA 90 bp CTAGGTGGTTTTTATATTGTATTTGAAAACAGCCCTGGGCAGGGATATCATAATAGGATCTTCTCCAGTTaGTCTACTGGTTGGGGCCGG +
Preference number: 5 (lower is better)
Translates to: LGGFYIVFENSPGQGYHNRIFSS*STGWGR
Trigger: CCGGCCCCAACCAGTAGACAAACTGGAGAAGATCCT...ATTATGATATCCCTGCCCAGGGCTGTTTTCAAATACAATATAAAAACCACCTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000300650.9
ENST00000530849.1
ENST00000531452.5
CDS-3UTR CAA 90 bp AACATCATCTTCCCTACAATCTGCATCCCCCAAAGGAATTGCAAGATGAGGGGGAATTTGATACACTCCTaGTGCAATACATGGGTACAC +
Preference number: 5 (lower is better)
Translates to: NIIFPTICIPQRNCKMRGNLIHS*CNTWVH
Trigger: GTGTACCCATGTATTGCACAAGGAGTGTATCAAATT...CCCCCTCATCTTGCAATTCCTTTGGGGGATGCAGATTGTAGGGAAGATGATGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000300650.9
ENST00000530849.1
ENST00000531452.5
CDS-3UTR CAA 90 bp AGTCTCATTTTATCCATTTGGAGTAGAGTGGCTAAAACAATACTGAGGCTTCTGAGGGACAAGTGTCATTaGTGTTGGTCTGGGCCCAGA +
Preference number: 5 (lower is better)
Translates to: SLILSIWSRVAKTILRLLRDKCH*CWSGPR
Trigger: TCTGGGCCCAGACCAACACAAATGACACTTGTCCCT...CAGAAGCCTCAGTATTGTTTTAGCCACTCTACTCCAAATGGATAAAATGAGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300650.9
ENST00000530849.1
ENST00000531452.5
CDS-3UTR CAA 90 bp AGAAGCTTGTGGGGTACATGGAGGAATTGGGACCTGGTTATGTTGTTATTCTCGAGACCTTCGTCTGATTaGGAAGCACATAAACTAGAA +
Preference number: 5 (lower is better)
Translates to: RSLWGTWRNWDLVMLLFSRPSSD*EAHKLE
Trigger: TTCTAGTTTATGTGCTTCCAAATCAGACGAAGGTCT...CGAGAATAACAACATAACCAGGTCCCAATTCCTCCATGTACCCCACAAGCTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300650.9
ENST00000530849.1
CDS-3UTR CAA 90 bp CAGAAGCTTGTGGGGTACATGGAGGAATTGGGACCTGGTTATGTTGTTATTCTCAGACCTTCGTCTGATTaGGAAGCACATAAACTAGAA +
Preference number: 5 (lower is better)
Translates to: QKLVGYMEELGPGYVVILRPSSD*EAHKLE
Trigger: TTCTAGTTTATGTGCTTCCAAATCAGACGAAGGTCT...GAGAATAACAACATAACCAGGTCCCAATTCCTCCATGTACCCCACAAGCTTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300650.9
ENST00000530849.1
CDS-3UTR CAA 90 bp AAATATAGAGTTTTAGAAATCTTGAACCCGCGCTTCCTGTTCACATCAGTTTCTCTCCTTCAACCCCATTaGCTGGAGACACTACAGGTC +
Preference number: 5 (lower is better)
Translates to: KYRVLEILNPRFLFTSVSLLQPH*LETLQV
Trigger: GACCTGTAGTGTCTCCAGCAAATGGGGTTGAAGGAG...AGAAACTGATGTGAACAGGAAGCGCGGGTTCAAGATTTCTAAAACTCTATATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300650.9
ENST00000531452.5
CDS-3UTR CAA 90 bp AGAGTTTTAGAAATCTTGAACCCGCGCTTCCTGTTCACATCAGTTTCTCTTCTTGTCTGGGCCCAGAATTaGATACACTCCTTGTGCAAT +
Preference number: 5 (lower is better)
Translates to: RVLEILNPRFLFTSVSLLVWAQN*IHSLCN
Trigger: ATTGCACAAGGAGTGTATCAAATTCTGGGCCCAGAC...AAGAAGAGAAACTGATGTGAACAGGAAGCGCGGGTTCAAGATTTCTAAAACTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300650.9
ENST00000530849.1
ENST00000531452.5
CDS-3UTR CAA 90 bp GTATTTGAAAACAGCCCTGGGCAGGGATATCATAATTTCAAGGCCAAACTAAACGTCTGGGCCCAGAATTaGATACACTCCTTGTGCAAT +
Preference number: 5 (lower is better)
Translates to: VFENSPGQGYHNFKAKLNVWAQN*IHSLCN
Trigger: ATTGCACAAGGAGTGTATCAAATTCTGGGCCCAGAC...GTTTAGTTTGGCCTTGAAATTATGATATCCCTGCCCAGGGCTGTTTTCAAATAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300650.9
ENST00000530849.1
ENST00000531452.5
CDS-3UTR CAA 90 bp AAATATAGAGTTTTAGAAATCTTGAACCCGCGCTTCCTGTTCACATCAGTTTCTAGGGACAAGTGTCATTaGTGTTGGTCTGGGCCCAGA +
Preference number: 5 (lower is better)
Translates to: KYRVLEILNPRFLFTSVSRDKCH*CWSGPR
Trigger: TCTGGGCCCAGACCAACACAAATGACACTTGTCCCT...AGAAACTGATGTGAACAGGAAGCGCGGGTTCAAGATTTCTAAAACTCTATATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300650.9
ENST00000530849.1
ENST00000531452.5
CDS-3UTR CAA 90 bp CAGAAGCTTGTGGGGTACATGGAGGAATTGGGACCTGGTTATGTTGTTATTCTCGTTTTTATATTGTATTaGAAAACAGCCCTGGGCAGG +
Preference number: 5 (lower is better)
Translates to: QKLVGYMEELGPGYVVILVFILY*KTALGR
Trigger: CCTGCCCAGGGCTGTTTTCAAATACAATATAAAAAC...GAGAATAACAACATAACCAGGTCCCAATTCCTCCATGTACCCCACAAGCTTCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000300650.9
ENST00000530849.1
CDS-3UTR CAA 90 bp CTAGGTGGTTTTTATATTGTATTTGAAAACAGCCCTGGGCAGGGATATCATAATTTCTGTGCAGAGTCTTaGGTGCTTAGACCATCTGGG +
Preference number: 5 (lower is better)
Translates to: LGGFYIVFENSPGQGYHNFCAES*VLRPSG
Trigger: CCCAGATGGTCTAAGCACCAAAGACTCTGCACAGAA...ATTATGATATCCCTGCCCAGGGCTGTTTTCAAATACAATATAAAAACCACCTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000300650.9
ENST00000530849.1
ENST00000531452.5
CDS-3UTR CAA 90 bp AGAGTTTTAGAAATCTTGAACCCGCGCTTCCTGTTCACATCAGTTTCTCTTCTTAGAGTTTTAGAAATCTaGAACCCGCGCTTCCTGTTC +
Preference number: 5 (lower is better)
Translates to: RVLEILNPRFLFTSVSLLRVLEI*NPRFLF
Trigger: GAACAGGAAGCGCGGGTTCAAGATTTCTAAAACTCT...AAGAAGAGAAACTGATGTGAACAGGAAGCGCGGGTTCAAGATTTCTAAAACTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300650.9
ENST00000530849.1
ENST00000531452.5
CDS-3UTR CAA 90 bp CTCATTTTATCCATTTGGAGTAGAGTGGCTAAAACAATACTGAGGCTTCTGGAGCTCCTTGGTTATTGTTaGGCTACTTACACTCAACAG +
Preference number: 5 (lower is better)
Translates to: LILSIWSRVAKTILRLLELLGYC*ATYTQQ
Trigger: CTGTTGAGTGTAAGTAGCCAAACAATAACCAAGGAG...CTCCAGAAGCCTCAGTATTGTTTTAGCCACTCTACTCCAAATGGATAAAATGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300650.9
ENST00000531452.5
CDS-3UTR CAA 90 bp AAATATAGAGTTTTAGAAATCTTGAACCCGCGCTTCCTGTTCACATCAGTTTCTCAGGGAAGAGCTATCTaGATCATCATCCTGATCCAC +
Preference number: 5 (lower is better)
Translates to: KYRVLEILNPRFLFTSVSQGRAI*IIILIH
Trigger: GTGGATCAGGATGATGATCAAGATAGCTCTTCCCTG...AGAAACTGATGTGAACAGGAAGCGCGGGTTCAAGATTTCTAAAACTCTATATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300650.9
ENST00000531452.5
CDS-3UTR CAA 90 bp CTAGGTGGTTTTTATATTGTATTTGAAAACAGCCCTGGGCAGGGATATCATAATCAGGGAAGAGCTATCTaGATCATCATCCTGATCCAC +
Preference number: 5 (lower is better)
Translates to: LGGFYIVFENSPGQGYHNQGRAI*IIILIH
Trigger: GTGGATCAGGATGATGATCAAGATAGCTCTTCCCTG...ATTATGATATCCCTGCCCAGGGCTGTTTTCAAATACAATATAAAAACCACCTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300650.9
ENST00000531452.5
CDS-3UTR CAA 90 bp AAATATAGAGTTTTAGAAATCTTGAACCCGCGCTTCCTGTTCACATCAGTTTCTGGGTACATGGAGGAATaGGGACCTGGTTATGTTGTT +
Preference number: 5 (lower is better)
Translates to: KYRVLEILNPRFLFTSVSGYMEE*GPGYVV
Trigger: AACAACATAACCAGGTCCCAATTCCTCCATGTACCC...AGAAACTGATGTGAACAGGAAGCGCGGGTTCAAGATTTCTAAAACTCTATATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300650.9
ENST00000530849.1
CDS-3UTR CAA 90 bp GTATTTGAAAACAGCCCTGGGCAGGGATATCATAATTTCAAGGCCAAACTAAACAATTTGATACACTCCTaGTGCAATACATGGGTACAC +
Preference number: 5 (lower is better)
Translates to: VFENSPGQGYHNFKAKLNNLIHS*CNTWVH
Trigger: GTGTACCCATGTATTGCACAAGGAGTGTATCAAATT...GTTTAGTTTGGCCTTGAAATTATGATATCCCTGCCCAGGGCTGTTTTCAAATAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300650.9
ENST00000530849.1
ENST00000531452.5
CDS-3UTR CAA 90 bp CTAGGTGGTTTTTATATTGTATTTGAAAACAGCCCTGGGCAGGGATATCATAATTGGGACCTGGTTATGTaGTTATTCTCGGACTGTGAA +
Preference number: 5 (lower is better)
Translates to: LGGFYIVFENSPGQGYHNWDLVM*LFSDCE
Trigger: TTCACAGTCCGAGAATAACAACATAACCAGGTCCCA...ATTATGATATCCCTGCCCAGGGCTGTTTTCAAATACAATATAAAAACCACCTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300650.9
ENST00000530849.1
CDS-3UTR CAA 90 bp AGAGTTTTAGAAATCTTGAACCCGCGCTTCCTGTTCACATCAGTTTCTCTTCTTATTCTACAAGTAATTTaGCACAGACATCTCCTCACC +
Preference number: 5 (lower is better)
Translates to: RVLEILNPRFLFTSVSLLILQVI*HRHLLT
Trigger: GGTGAGGAGATGTCTGTGCAAAATTACTTGTAGAAT...AAGAAGAGAAACTGATGTGAACAGGAAGCGCGGGTTCAAGATTTCTAAAACTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300650.9
ENST00000530849.1
CDS-3UTR CAA 90 bp CTCATTTTATCCATTTGGAGTAGAGTGGCTAAAACAATACTGAGGCTTCTGGAGTCTCTATCTTCTTCTTaGTTTCTTCCCGCTTTATTG +
Preference number: 5 (lower is better)
Translates to: LILSIWSRVAKTILRLLESLSSS*FLPALL
Trigger: CAATAAAGCGGGAAGAAACAAAGAAGAAGATAGAGA...CTCCAGAAGCCTCAGTATTGTTTTAGCCACTCTACTCCAAATGGATAAAATGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300650.9
ENST00000530849.1
ENST00000531452.5
CDS-3UTR CAA 90 bp AGTCTCATTTTATCCATTTGGAGTAGAGTGGCTAAAACAATACTGAGGCTTCTGAATTTGATACACTCCTaGTGCAATACATGGGTACAC +
Preference number: 5 (lower is better)
Translates to: SLILSIWSRVAKTILRLLNLIHS*CNTWVH
Trigger: GTGTACCCATGTATTGCACAAGGAGTGTATCAAATT...CAGAAGCCTCAGTATTGTTTTAGCCACTCTACTCCAAATGGATAAAATGAGACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300650.9
ENST00000530849.1
ENST00000531452.5
CDS TCA 90 bp ATGATAAATATGAATGCTAATGTCCTGCACTCATCAGTTACTCAGTaGAAGAGACTACACGTAGGTCATAAAGTTCCTACTTGCCATAAG +
Preference number: 5 (lower is better)
Translates to: MINMNANVLHSSVTQ*KRLHVGHKVPTCHK
Trigger: CTTATGGCAAGTAGGAACTTTATGACCTACGTGTAGTCTCTTTCACTGAGTAACTGATGAGTGCAGGACATTAGCATTCATATTTATCAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529869.1
CDS GCA 90 bp TTCTCACAAAGCTTCTCAATTTCAGCTTTCAGATCCTGCTCCTTCTaGAAAAACTCCTTCTTCTCTTTCTCTATCTTCTTCTTTGTTTCT +
Preference number: 5 (lower is better)
Translates to: FSQSFSISAFRSCSF*KNSFFSFSIFFFVS
Trigger: AGAAACAAAGAAGAAGATAGAGAAAGAGAAGAAGGAGTTTTTGCAGAAGGAGCAGGATCTGAAAGCTGAAATTGAGAAGCTTTGTGAGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300650.9
ENST00000530849.1
ENST00000531287.5
ENST00000531452.5
CDS-3UTR CAA 90 bp AAATATAGAGTTTTAGAAATCTTGAACCCGCGCTTCCTGTTCACATCAGTTTCTGTTTTTATATTGTATTaGAAAACAGCCCTGGGCAGG +
Preference number: 5 (lower is better)
Translates to: KYRVLEILNPRFLFTSVSVFILY*KTALGR
Trigger: CCTGCCCAGGGCTGTTTTCAAATACAATATAAAAAC...AGAAACTGATGTGAACAGGAAGCGCGGGTTCAAGATTTCTAAAACTCTATATTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000300650.9
ENST00000530849.1
ENST00000531452.5
CDS-3UTR CAA 90 bp AAATATAGAGTTTTAGAAATCTTGAACCCGCGCTTCCTGTTCACATCAGTTTCTTATTCTCCTTGGTTATaGTTTGGCTACTTACACTCA +
Preference number: 5 (lower is better)
Translates to: KYRVLEILNPRFLFTSVSYSPWL*FGYLHS
Trigger: TGAGTGTAAGTAGCCAAACAATAACCAAGGAGAATA...AGAAACTGATGTGAACAGGAAGCGCGGGTTCAAGATTTCTAAAACTCTATATTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300650.9
ENST00000531452.5
CDS-3UTR CAA 90 bp AGAGTCACAGCTTTCCCAGGTATAAAACCTAAAATTAAGAAGTACAATAAGCAGTCTCTATCTTCTTCTTaGTTTCTTCCCGCTTTATTG +
Preference number: 5 (lower is better)
Translates to: RVTAFPGIKPKIKKYNKQSLSSS*FLPALL
Trigger: CAATAAAGCGGGAAGAAACAAAGAAGAAGATAGAGA...CTGCTTATTGTACTTCTTAATTTTAGGTTTTATACCTGGGAAAGCTGTGACTCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300650.9
ENST00000530849.1
CDS GCA 72 bp GGGGGCATTGGCCACAACACCAGCAACCTCAGACGCTaGCATTATGCTCTCCCGCGCCGCGCCCCCGGGAGG +
Preference number: 6 (lower is better)
Translates to: GGIGHNTSNLRR*HYALPRRAPGR
Trigger: CCTCCCGGGGGCGCGGCGCGGGAGAGCATAATGGCAGCGTCTGAGGTTGCTGGTGTTGTGGCCAATGCCCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000531287.5
ENST00000531452.5
CDS GCA 72 bp TGGCCACAACACCAGCAACCTCAGACGCTGCCATTATaGTCTCCCGCGCCGCGCCCCCGGGAGGAAAGTGGG +
Preference number: 6 (lower is better)
Translates to: WPQHQQPQTLPL*SPAPRPREESG
Trigger: CCCACTTTCCTCCCGGGGGCGCGGCGCGGGAGAGCATAATGGCAGCGTCTGAGGTTGCTGGTGTTGTGGCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000531287.5
ENST00000531452.5
CDS TCA 72 bp TGGAGGCGGCAGGGGGCATGTGTGGACCGTGGGGGCTaGCAAGGGAACCCAAGCCAGGGCTATTTCTGCCAT +
Preference number: 6 (lower is better)
Translates to: WRRQGACVDRGG*QGNPSQGYFCH
Trigger: ATGGCAGAAATAGCCCTGGCTTGGGTTCCCTTGTCAGCCCCCACGGTCCACACATGCCCCCTGCCGCCTCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000300650.9
ENST00000530849.1
ENST00000531287.5
ENST00000531452.5
ENST00000534709.1
CDS GCA 72 bp GGATCTGCACTGGGCATAACCATGGGCATTGTGACCTaGCCAATGGAGAAGGGCATCCGAGGAGCCAGAGAG +
Preference number: 6 (lower is better)
Translates to: GSALGITMGIVT*PMEKGIRGARE
Trigger: CTCTCTGGCTCCTCGGATGCCCTTCTCCATTGGGCAGGTCACAATGCCCATGGTTATGCCCAGTGCAGATCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300650.9
ENST00000530849.1
ENST00000531287.5
ENST00000531452.5
ENST00000534709.1
CDS CCA 72 bp CTTAGTATGGCACCCTGCCTTAAGAGACCGAGTGACTaGATGGAGGCTCTCCCGAAGGCTTGTGTCCCCCTC +
Preference number: 6 (lower is better)
Translates to: LSMAPCLKRPSD*MEALPKACVPL
Trigger: GAGGGGGACACAAGCCTTCGGGAGAGCCTCCATCCAGTCACTCGGTCTCTTAAGGCAGGGTGCCATACTAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300650.9
ENST00000529869.1
ENST00000531452.5
ENST00000534428.5
CDS CCA 72 bp ACCCGCTCATGTTCTGCCAGTCGTGCAGCAACCAACTaGATAAGTTCCTCCATGGTCAGGCCTGCCATGGTG +
Preference number: 6 (lower is better)
Translates to: TRSCSASRAATN*ISSSMVRPAMV
Trigger: CACCATGGCAGGCCTGACCATGGAGGAACTTATCCAGTTGGTTGCTGCACGACTGGCAGAACATGAGCGGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000300650.9
ENST00000524917.5
ENST00000530849.1
ENST00000531287.5
ENST00000531452.5
ENST00000534709.1
CDS CCA 72 bp AGAAGGCAAGAACATTGGGGTACTGATTTGGGCCAGTaGAGCAGGGAACAAGGCCCGGATGCGACCAAGTGG +
Preference number: 6 (lower is better)
Translates to: RRQEHWGTDLGQ*SREQGPDATKW
Trigger: CCACTTGGTCGCATCCGGGCCTTGTTCCCTGCTCCACTGGCCCAAATCAGTACCCCAATGTTCTTGCCTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000300650.9
ENST00000524917.5
ENST00000531287.5
ENST00000531452.5
ENST00000534709.1
CDS CCA 72 bp ACTTGGGCAGAAGGCAAGAACATTGGGGTACTGATTTaGGCCAGTGGAGCAGGGAACAAGGCCCGGATGCGA +
Preference number: 6 (lower is better)
Translates to: TWAEGKNIGVLI*ASGAGNKARMR
Trigger: TCGCATCCGGGCCTTGTTCCCTGCTCCACTGGCCCAAATCAGTACCCCAATGTTCTTGCCTTCTGCCCAAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000300650.9
ENST00000524917.5
ENST00000531287.5
ENST00000531452.5
ENST00000534709.1
CDS CAA 72 bp AACTTGGGCAGAAGGCAAGAACATTGGGGTACTGATTaGGGCCAGTGGAGCAGGGAACAAGGCCCGGATGCG +
Preference number: 6 (lower is better)
Translates to: NLGRRQEHWGTD*GQWSREQGPDA
Trigger: CGCATCCGGGCCTTGTTCCCTGCTCCACTGGCCCAAATCAGTACCCCAATGTTCTTGCCTTCTGCCCAAGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000300650.9
ENST00000524917.5
ENST00000531287.5
ENST00000531452.5
ENST00000534709.1
CDS CAA 72 bp GGAGAAGGGCATCCGAGGAGCCAGAGAGGGACTGGGTaGAAACACCTGAAGCATGAAGTCTGTCTGCAGAGG +
Preference number: 6 (lower is better)
Translates to: GEGHPRSQRGTG*KHLKHEVCLQR
Trigger: CCTCTGCAGACAGACTTCATGCTTCAGGTGTTTCAACCCAGTCCCTCTCTGGCTCCTCGGATGCCCTTCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534709.1
CDS CAA 90 bp CACTGTGGGAACCGGGTCAGCAGCTTCTCCAGGATCTTCTCCAGTTaGTCTACTGGTTGGGGCCGGGGAGTTTCAGCAGAAGCCTTAACA +
Preference number: 6 (lower is better)
Translates to: HCGNRVSSFSRIFSS*STGWGRGVSAEALT
Trigger: TGTTAAGGCTTCTGCTGAAACTCCCCGGCCCCAACCAGTAGACAAACTGGAGAAGATCCTGGAGAAGCTGCTGACCCGGTTCCCACAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000300650.9
ENST00000530849.1
ENST00000531287.5
ENST00000531452.5
ENST00000534709.1
CDS GCA 72 bp GCAATTCCTGGAGGCAAGCTGCTTAGTATGGCACCCTaGCTTAAGAGACCGAGTGACTGGATGGAGGCTCTC +
Preference number: 6 (lower is better)
Translates to: AIPGGKLLSMAP*LKRPSDWMEAL
Trigger: GAGAGCCTCCATCCAGTCACTCGGTCTCTTAAGGCAGGGTGCCATACTAAGCAGCTTGCCTCCAGGAATTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300650.9
ENST00000529869.1
ENST00000531452.5
CDS CCA 72 bp GCCATTGGATGCAGCTCACTGGGCTGGACGAGTTTCTaGCACATTAGACATAGCTTACAGGTGGCTGGAGCC +
Preference number: 6 (lower is better)
Translates to: AIGCSSLGWTSF*HIRHSLQVAGA
Trigger: GGCTCCAGCCACCTGTAAGCTATGTCTAATGTGCCAGAAACTCGTCCAGCCCAGTGAGCTGCATCCAATGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530849.1
CDS CAA 72 bp AACCGGGTCAGCAGCTTCTCCAGGATCTTCTCCAGTTaGTCTACTGGTTGGGGCCGGGGAGTTTCAGCAGAA +
Preference number: 6 (lower is better)
Translates to: NRVSSFSRIFSS*STGWGRGVSAE
Trigger: TTCTGCTGAAACTCCCCGGCCCCAACCAGTAGACAAACTGGAGAAGATCCTGGAGAAGCTGCTGACCCGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000300650.9
ENST00000530849.1
ENST00000531287.5
ENST00000531452.5
ENST00000534709.1
CDS TCA 72 bp TCTCCTGCTGTGCTGGCCACATCCTTCAAATCAGACTaGGACCCACTGCCAGAAAGACAAAGGGCTGTGGCT +
Preference number: 6 (lower is better)
Translates to: SPAVLATSFKSD*DPLPERQRAVA
Trigger: AGCCACAGCCCTTTGTCTTTCTGGCAGTGGGTCTCAGTCTGATTTGAAGGATGTGGCCAGCACAGCAGGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300650.9
ENST00000529869.1
ENST00000531452.5
ENST00000534428.5
CDS TCA 72 bp ATGAAACTTGGGCAGAAGGCAAGAACATTGGGGTACTaGTTTGGGCCAGTGGAGCAGGGAACAAGGCCCGGA +
Preference number: 6 (lower is better)
Translates to: MKLGQKARTLGY*FGPVEQGTRPG
Trigger: TCCGGGCCTTGTTCCCTGCTCCACTGGCCCAAATCAGTACCCCAATGTTCTTGCCTTCTGCCCAAGTTTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000300650.9
ENST00000524917.5
ENST00000531287.5
ENST00000531452.5
ENST00000534709.1
CDS GCA 72 bp AGTACTTGCTGCCACCCGCTCATGTTCTGCCAGTCGTaGAGCAACCAACTGGATAAGTTCCTCCATGGTCAG +
Preference number: 6 (lower is better)
Translates to: STCCHPLMFCQS*SNQLDKFLHGQ
Trigger: CTGACCATGGAGGAACTTATCCAGTTGGTTGCTGCACGACTGGCAGAACATGAGCGGGTGGCAGCAAGTACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000300650.9
ENST00000524917.5
ENST00000530849.1
ENST00000531287.5
ENST00000531452.5
ENST00000534709.1
CDS CCA 72 bp AGCTTCTCCAGGATCTTCTCCAGTTTGTCTACTGGTTaGGGCCGGGGAGTTTCAGCAGAAGCCTTAACACCG +
Preference number: 6 (lower is better)
Translates to: SFSRIFSSLSTG*GRGVSAEALTP
Trigger: CGGTGTTAAGGCTTCTGCTGAAACTCCCCGGCCCCAACCAGTAGACAAACTGGAGAAGATCCTGGAGAAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000300650.9
ENST00000530849.1
ENST00000531287.5
ENST00000531452.5
ENST00000534709.1
CDS CCA 72 bp CAGCAGCTTCTCCAGGATCTTCTCCAGTTTGTCTACTaGTTGGGGCCGGGGAGTTTCAGCAGAAGCCTTAAC +
Preference number: 6 (lower is better)
Translates to: QQLLQDLLQFVY*LGPGSFSRSLN
Trigger: GTTAAGGCTTCTGCTGAAACTCCCCGGCCCCAACCAGTAGACAAACTGGAGAAGATCCTGGAGAAGCTGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000300650.9
ENST00000530849.1
ENST00000531287.5
ENST00000531452.5
ENST00000534709.1
CDS CCA 72 bp GCCATTGGATGCAGCTCACTGGGCTGGACGAGTTTCTaGCACATTAGACATAGCTTACAGGTGGCTGGAGCA +
Preference number: 6 (lower is better)
Translates to: AIGCSSLGWTSF*HIRHSLQVAGA
Trigger: TGCTCCAGCCACCTGTAAGCTATGTCTAATGTGCCAGAAACTCGTCCAGCCCAGTGAGCTGCATCCAATGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300650.9
ENST00000524917.5
ENST00000531287.5
ENST00000531452.5
ENST00000534709.1
CDS CAA 72 bp GCACATAAACTAGAAGATTCCGGAGGACTGGGGGCATaGGCCACAACACCAGCAACCTCAGACGCTGCCATT +
Preference number: 6 (lower is better)
Translates to: AHKLEDSGGLGA*ATTPATSDAAI
Trigger: AATGGCAGCGTCTGAGGTTGCTGGTGTTGTGGCCAATGCCCCCAGTCCTCCGGAATCTTCTAGTTTATGTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000300650.9
ENST00000529869.1
ENST00000530849.1
ENST00000531287.5
ENST00000531452.5
ENST00000534428.5
CDS TCA 72 bp CCATGGTCAGGCCTGCCATGGTGGTACGTGCTGTCTTaGTCTGCTGAAGAATGTTGGTCATCTGGGCCTTAT +
Preference number: 6 (lower is better)
Translates to: PWSGLPWWYVLS*SAEECWSSGPY
Trigger: ATAAGGCCCAGATGACCAACATTCTTCAGCAGATCAAGACAGCACGTACCACCATGGCAGGCCTGACCATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000300650.9
ENST00000524917.5
ENST00000530849.1
ENST00000531287.5
ENST00000531452.5
ENST00000534709.1
CDS GCA 72 bp GCTGTGGCTATCAAGTTTTCTCCTAAAACCACCTGGTaGGCTGCTGAGGTGTCACCTGCTGATGAACCAGGA +
Preference number: 6 (lower is better)
Translates to: AVAIKFSPKTTW*AAEVSPADEPG
Trigger: TCCTGGTTCATCAGCAGGTGACACCTCAGCAGCGCACCAGGTGGTTTTAGGAGAAAACTTGATAGCCACAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300650.9
ENST00000529869.1
ENST00000531452.5
ENST00000534428.5
CDS GCA 72 bp GGGGATTTCTCTTCAGAGCAATTCCTGGAGGCAAGCTaGTTAGTATGGCACCCTGCCTTAAGAGACCGAGTG +
Preference number: 6 (lower is better)
Translates to: GDFSSEQFLEAS*LVWHPALRDRV
Trigger: CACTCGGTCTCTTAAGGCAGGGTGCCATACTAAGCAGCTTGCCTCCAGGAATTGCTCTGAAGAGAAATCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300650.9
ENST00000529869.1
ENST00000531452.5
CDS GCA 72 bp CACTCCTTGTGCAATACATGGGTACACGCCATTGGATaGAGCTCACTGGGCTGGACGAGTTTCTGGCACATT +
Preference number: 6 (lower is better)
Translates to: HSLCNTWVHAIG*SSLGWTSFWHI
Trigger: AATGTGCCAGAAACTCGTCCAGCCCAGTGAGCTGCATCCAATGGCGTGTACCCATGTATTGCACAAGGAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300650.9
ENST00000530849.1
ENST00000531287.5
ENST00000531452.5
ENST00000534709.1
CDS CCA 72 bp AGGGCTGTGGCTATCAAGTTTTCTCCTAAAACCACCTaGTGCGCTGCTGAGGTGTCACCTGCTGATGAACCA +
Preference number: 6 (lower is better)
Translates to: RAVAIKFSPKTT*CAAEVSPADEP
Trigger: TGGTTCATCAGCAGGTGACACCTCAGCAGCGCACCAGGTGGTTTTAGGAGAAAACTTGATAGCCACAGCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300650.9
ENST00000529869.1
ENST00000531452.5
ENST00000534428.5
CDS CCA 72 bp TCTTCAGAGCAATTCCTGGAGGCAAGCTGCTTAGTATaGCACCCTGCCTTAAGAGACCGAGTGACTGGATGG +
Preference number: 6 (lower is better)
Translates to: SSEQFLEASCLV*HPALRDRVTGW
Trigger: CCATCCAGTCACTCGGTCTCTTAAGGCAGGGTGCCATACTAAGCAGCTTGCCTCCAGGAATTGCTCTGAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300650.9
ENST00000529869.1
ENST00000531452.5
CDS CCA 72 bp TCCGAACTCCATTCAGTCTCGTCTCCCACTCCTGTTTaGAACGAACTGTCTCCAGTGTTGGGGGAGTTGACT +
Preference number: 6 (lower is better)
Translates to: SELHSVSSPTPV*NELSPVLGELT
Trigger: AGTCAACTCCCCCAACACTGGAGACAGTTCGTTCCAAACAGGAGTGGGAGACGAGACTGAATGGAGTTCGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300650.9
ENST00000530849.1
ENST00000531287.5
ENST00000531452.5
CDS CCA 72 bp GATACACTCCTTGTGCAATACATGGGTACACGCCATTaGATGCAGCTCACTGGGCTGGACGAGTTTCTGGCA +
Preference number: 6 (lower is better)
Translates to: DTLLVQYMGTRH*MQLTGLDEFLA
Trigger: TGCCAGAAACTCGTCCAGCCCAGTGAGCTGCATCCAATGGCGTGTACCCATGTATTGCACAAGGAGTGTATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300650.9
ENST00000530849.1
ENST00000531287.5
ENST00000531452.5
ENST00000534709.1
CDS CCA 72 bp TGGGCCCAGAATTTGATACACTCCTTGTGCAATACATaGGTACACGCCATTGGATGCAGCTCACTGGGCTGG +
Preference number: 6 (lower is better)
Translates to: WAQNLIHSLCNT*VHAIGCSSLGW
Trigger: CCAGCCCAGTGAGCTGCATCCAATGGCGTGTACCCATGTATTGCACAAGGAGTGTATCAAATTCTGGGCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300650.9
ENST00000530849.1
ENST00000531287.5
ENST00000531452.5
ENST00000534709.1
CDS CAA 72 bp ATCCGAACTCCATTCAGTCTCGTCTCCCACTCCTGTTaGGAACGAACTGTCTCCAGTGTTGGGGGAGTTGAC +
Preference number: 6 (lower is better)
Translates to: IRTPFSLVSHSC*ERTVSSVGGVD
Trigger: GTCAACTCCCCCAACACTGGAGACAGTTCGTTCCAAACAGGAGTGGGAGACGAGACTGAATGGAGTTCGGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300650.9
ENST00000530849.1
ENST00000531287.5
ENST00000531452.5
CDS CAA 90 bp GATTTGGAAGCACATAAACTAGAAGATTCCGGAGGACTGGGGGCATaGGCCACAACACCAGCAACCTCAGACGCTGCCATTATGCTCTCC +
Preference number: 6 (lower is better)
Translates to: DLEAHKLEDSGGLGA*ATTPATSDAAIMLS
Trigger: GGAGAGCATAATGGCAGCGTCTGAGGTTGCTGGTGTTGTGGCCAATGCCCCCAGTCCTCCGGAATCTTCTAGTTTATGTGCTTCCAAATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000531287.5
ENST00000531452.5
CDS CAA 90 bp GATTTGGAAGCACATAAACTAGAAGATTCCGGAGGACTGGGGGCATaGGCCACAACACCAGCAACCTCAGACGCTGCCATTATGCTCTGT +
Preference number: 6 (lower is better)
Translates to: DLEAHKLEDSGGLGA*ATTPATSDAAIMLC
Trigger: ACAGAGCATAATGGCAGCGTCTGAGGTTGCTGGTGTTGTGGCCAATGCCCCCAGTCCTCCGGAATCTTCTAGTTTATGTGCTTCCAAATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000530849.1
CDS TCA 72 bp AGGCCTGCCATGGTGGTACGTGCTGTCTTGATCTGCTaGAGAATGTTGGTCATCTGGGCCTTATTGCACTGT +
Preference number: 6 (lower is better)
Translates to: RPAMVVRAVLIC*RMLVIWALLHC
Trigger: ACAGTGCAATAAGGCCCAGATGACCAACATTCTTCAGCAGATCAAGACAGCACGTACCACCATGGCAGGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000300650.9
ENST00000524917.5
ENST00000530849.1
ENST00000531287.5
ENST00000531452.5
ENST00000534709.1
CDS GCA 72 bp AAGTTCCTCCATGGTCAGGCCTGCCATGGTGGTACGTaGTGTCTTGATCTGCTGAAGAATGTTGGTCATCTG +
Preference number: 6 (lower is better)
Translates to: KFLHGQACHGGT*CLDLLKNVGHL
Trigger: CAGATGACCAACATTCTTCAGCAGATCAAGACAGCACGTACCACCATGGCAGGCCTGACCATGGAGGAACTT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000300650.9
ENST00000524917.5
ENST00000530849.1
ENST00000531287.5
ENST00000531452.5
ENST00000534709.1
CDS CCA 72 bp ATCCTGATCCACTCGGACTCCTTCAACCCCATTTGCTaGAGACACTACAGGTCGGAAATCCAAGCTTGTGTC +
Preference number: 6 (lower is better)
Translates to: ILIHSDSFNPIC*RHYRSEIQACV
Trigger: GACACAAGCTTGGATTTCCGACCTGTAGTGTCTCCAGCAAATGGGGTTGAAGGAGTCCGAGTGGATCAGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300650.9
ENST00000529869.1
ENST00000531452.5
CDS CCA 72 bp ACATGGGTACACGCCATTGGATGCAGCTCACTGGGCTaGACGAGTTTCTGGCACATTAGACATAGCTTACAG +
Preference number: 6 (lower is better)
Translates to: TWVHAIGCSSLG*TSFWHIRHSLQ
Trigger: CTGTAAGCTATGTCTAATGTGCCAGAAACTCGTCCAGCCCAGTGAGCTGCATCCAATGGCGTGTACCCATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000300650.9
ENST00000524917.5
ENST00000530849.1
ENST00000531287.5
ENST00000531452.5
ENST00000534709.1
CDS CCA 72 bp GCAATACATGGGTACACGCCATTGGATGCAGCTCACTaGGCTGGACGAGTTTCTGGCACATTAGACATAGCT +
Preference number: 6 (lower is better)
Translates to: AIHGYTPLDAAH*AGRVSGTLDIA
Trigger: AGCTATGTCTAATGTGCCAGAAACTCGTCCAGCCCAGTGAGCTGCATCCAATGGCGTGTACCCATGTATTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000300650.9
ENST00000524917.5
ENST00000530849.1
ENST00000531287.5
ENST00000531452.5
ENST00000534709.1
CDS CAA 72 bp CATCATCCTGATCCACTCGGACTCCTTCAACCCCATTaGCTGGAGACACTACAGGTCGGAAATCCAAGCTTG +
Preference number: 6 (lower is better)
Translates to: HHPDPLGLLQPH*LETLQVGNPSL
Trigger: CAAGCTTGGATTTCCGACCTGTAGTGTCTCCAGCAAATGGGGTTGAAGGAGTCCGAGTGGATCAGGATGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300650.9
ENST00000529869.1
ENST00000531452.5
CDS CAA 90 bp GCAGAGTCTTTGGTGCTTAGACCATCTGGGAGACCTTCGTCTGATTaGGAAGCACATAAACTAGAAGATTCCGGAGGACTGGGGGCATTG +
Preference number: 6 (lower is better)
Translates to: AESLVLRPSGRPSSD*EAHKLEDSGGLGAL
Trigger: CAATGCCCCCAGTCCTCCGGAATCTTCTAGTTTATGTGCTTCCAAATCAGACGAAGGTCTCCCAGATGGTCTAAGCACCAAAGACTCTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000300650.9
ENST00000529869.1
ENST00000530849.1
ENST00000531287.5
ENST00000531452.5
ENST00000534428.5
CDS GCA 72 bp ATCATCCTGATCCACTCGGACTCCTTCAACCCCATTTaGTGGAGACACTACAGGTCGGAAATCCAAGCTTGT +
Preference number: 6 (lower is better)
Translates to: IILIHSDSFNPI*WRHYRSEIQAC
Trigger: ACAAGCTTGGATTTCCGACCTGTAGTGTCTCCAGCAAATGGGGTTGAAGGAGTCCGAGTGGATCAGGATGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300650.9
ENST00000529869.1
ENST00000531452.5
CDS CAA 90 bp CTTCAACCCCATTTGCTGGAGACACTACAGGTCGGAAATCCAAGCTaGTGTCCCTGTTACCTTCCTTTAGGATGGAGGTTTGTGGGGATT +
Preference number: 6 (lower is better)
Translates to: LQPHLLETLQVGNPS*CPCYLPLGWRFVGI
Trigger: AATCCCCACAAACCTCCATCCTAAAGGAAGGTAACAGGGACACAAGCTTGGATTTCCGACCTGTAGTGTCTCCAGCAAATGGGGTTGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300650.9
ENST00000529869.1
ENST00000531452.5
CDS CAA 90 bp TATCTTGATCATCATCCTGATCCACTCGGACTCCTTCAACCCCATTaGCTGGAGACACTACAGGTCGGAAATCCAAGCTTGTGTCCCTGT +
Preference number: 6 (lower is better)
Translates to: YLDHHPDPLGLLQPH*LETLQVGNPSLCPC
Trigger: ACAGGGACACAAGCTTGGATTTCCGACCTGTAGTGTCTCCAGCAAATGGGGTTGAAGGAGTCCGAGTGGATCAGGATGATGATCAAGATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300650.9
ENST00000529869.1
ENST00000531452.5
CDS GCA 72 bp GCTGCTGAGGTGTCACCTGCTGATGAACCAGGATTCTaGTCTGAGTGCTCCAAATGGACATTTCTGTTATTC +
Preference number: 6 (lower is better)
Translates to: AAEVSPADEPGF*SECSKWTFLLF
Trigger: GAATAACAGAAATGTCCATTTGGAGCACTCAGAGCAGAATCCTGGTTCATCAGCAGGTGACACCTCAGCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300650.9
ENST00000529869.1
ENST00000531452.5
ENST00000534428.5
CDS TCA 72 bp CGGTCCCACAAAATAACCCAAACAAGACCCAATGACTaGCTGAGAGAAAGCCTCAAGTCTGAGATGAGACGT +
Preference number: 6 (lower is better)
Translates to: RSHKITQTRPND*LRESLKSEMRR
Trigger: ACGTCTCATCTCAGACTTGAGGCTTTCTCTCAGTCAGTCATTGGGTCTTGTTTGGGTTATTTTGTGGGACCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529869.1
CDS GCA 72 bp GTTTGGCTACTTACACTCAACAGAGGCGAGTTCTTCTaGTTCTGTGCAGAGTCTTTGGTGCTTAGACCATCT +
Preference number: 6 (lower is better)
Translates to: VWLLTLNRGEFF*FCAESLVLRPS
Trigger: AGATGGTCTAAGCACCAAAGACTCTGCACAGAAGCAGAAGAACTCGCCTCTGTTGAGTGTAAGTAGCCAAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300650.9
ENST00000529869.1
ENST00000531452.5
ENST00000534428.5
CDS CAA 72 bp TTGGTGCTTAGACCATCTGGGAGACCTTCGTCTGATTaGGAAGCACATAAACTAGAAGATTCCGGAGGACTG +
Preference number: 6 (lower is better)
Translates to: LVLRPSGRPSSD*EAHKLEDSGGL
Trigger: CAGTCCTCCGGAATCTTCTAGTTTATGTGCTTCCAAATCAGACGAAGGTCTCCCAGATGGTCTAAGCACCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000300650.9
ENST00000529869.1
ENST00000530849.1
ENST00000531287.5
ENST00000531452.5
ENST00000534428.5
CDS GCA 72 bp GTGTCACCTGCTGATGAACCAGGATTCTGCTCTGAGTaGTCCAAATGGACATTTCTGTTATTCTCCTTGGTT +
Preference number: 6 (lower is better)
Translates to: VSPADEPGFCSE*SKWTFLLFSLV
Trigger: AACCAAGGAGAATAACAGAAATGTCCATTTGGAGCACTCAGAGCAGAATCCTGGTTCATCAGCAGGTGACAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300650.9
ENST00000529869.1
ENST00000531452.5
ENST00000534428.5
CDS GCA 72 bp GTCTTAAAGTCAGTACTCAACAGAGGCGAGTTCTTCTaGTTCTGTGCAGAGTCTTTGGTGCTTAGACCATCT +
Preference number: 6 (lower is better)
Translates to: VLKSVLNRGEFF*FCAESLVLRPS
Trigger: AGATGGTCTAAGCACCAAAGACTCTGCACAGAAGCAGAAGAACTCGCCTCTGTTGAGTACTGACTTTAAGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000530849.1
ENST00000531287.5
CDS CCA 72 bp AATCCAAGCTTGTGTCCCTGTTACCTTCCTTTAGGATaGAGGTTTGTGGGGATTTCTCTTCAGAGCAATTCC +
Preference number: 6 (lower is better)
Translates to: NPSLCPCYLPLG*RFVGISLQSNS
Trigger: GGAATTGCTCTGAAGAGAAATCCCCACAAACCTCCATCCTAAAGGAAGGTAACAGGGACACAAGCTTGGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300650.9
ENST00000529869.1
ENST00000531452.5
CDS CAA 90 bp GTCCGTCATTTAAGAGTTGGACAAAAGGGACAAGTGTCATTTGTGTaGGTCTGGGCCCAGAATTTGATACACTCCTTGTGCAATACATGG +
Preference number: 6 (lower is better)
Translates to: VRHLRVGQKGQVSFV*VWAQNLIHSLCNTW
Trigger: CCATGTATTGCACAAGGAGTGTATCAAATTCTGGGCCCAGACCAACACAAATGACACTTGTCCCTTTTGTCCAACTCTTAAATGACGGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000300650.9
ENST00000530849.1
ENST00000531287.5
ENST00000531452.5
ENST00000534709.1
CDS GCA 72 bp AATGTAGTTCTGGCAAACGGACACCAACATCCACGCTaGATTAATCATCGGTCCCACAAAATAACCCAAACA +
Preference number: 6 (lower is better)
Translates to: NVVLANGHQHPR*INHRSHKITQT
Trigger: TGTTTGGGTTATTTTGTGGGACCGATGATTAATGCAGCGTGGATGTTGGTGTCCGTTTGCCAGAACTACATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529869.1
CDS CCA 72 bp GTTGGACAAAAGGGACAAGTGTCATTTGTGTTGGTCTaGGCCCAGAATTTGATACACTCCTTGTGCAATACA +
Preference number: 6 (lower is better)
Translates to: VGQKGQVSFVLV*AQNLIHSLCNT
Trigger: TGTATTGCACAAGGAGTGTATCAAATTCTGGGCCCAGACCAACACAAATGACACTTGTCCCTTTTGTCCAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000300650.9
ENST00000530849.1
ENST00000531287.5
ENST00000531452.5
ENST00000534709.1
CDS CAA 72 bp TTAAGAGTTGGACAAAAGGGACAAGTGTCATTTGTGTaGGTCTGGGCCCAGAATTTGATACACTCCTTGTGC +
Preference number: 6 (lower is better)
Translates to: LRVGQKGQVSFV*VWAQNLIHSLC
Trigger: GCACAAGGAGTGTATCAAATTCTGGGCCCAGACCAACACAAATGACACTTGTCCCTTTTGTCCAACTCTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000300650.9
ENST00000530849.1
ENST00000531287.5
ENST00000531452.5
ENST00000534709.1
CDS CAA 90 bp GCTCTGAGTGCTCCAAATGGACATTTCTGTTATTCTCCTTGGTTATaGTTTGGCTACTTACACTCAACAGAGGCGAGTTCTTCTGCTTCT +
Preference number: 6 (lower is better)
Translates to: ALSAPNGHFCYSPWL*FGYLHSTEASSSAS
Trigger: AGAAGCAGAAGAACTCGCCTCTGTTGAGTGTAAGTAGCCAAACAATAACCAAGGAGAATAACAGAAATGTCCATTTGGAGCACTCAGAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300650.9
ENST00000529869.1
ENST00000531452.5
ENST00000534428.5
CDS TCA 72 bp ATGAATGCTAATGTCCTGCACTCATCAGTTACTCAGTaGAAGAGACTACACGTAGGTCATAAAGTTCCTACT +
Preference number: 6 (lower is better)
Translates to: MNANVLHSSVTQ*KRLHVGHKVPT
Trigger: AGTAGGAACTTTATGACCTACGTGTAGTCTCTTTCACTGAGTAACTGATGAGTGCAGGACATTAGCATTCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529869.1