RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RNF213 (Homo sapiens)

Ensembl gene IDs: ENSG00000173821

Ensembl transcript IDs: ENST00000319921.4, ENST00000411702.7, ENST00000427003.7, ENST00000508628.6, ENST00000558116.5, ENST00000558488.1, ENST00000559070.5, ENST00000559603.1, ENST00000559864.1, ENST00000560083.1, ENST00000560694.1, ENST00000570776.1, ENST00000571908.1, ENST00000572622.1, ENST00000573038.1, ENST00000573548.1, ENST00000573919.1, ENST00000574060.1, ENST00000574909.1, ENST00000582970.5

Found 2459 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TGGTGGCACCATGACAGTGAGGAGAACGGAGCACAGTTCCTTCCGTaGCTCCTGCCGGCGCTGCTCAAGGTGTGCATGGCTGAGTCCTGG +
Preference number: 1 (lower is better)
Translates to: WWHHDSEENGAQFLP*LLPALLKVCMAESW
Trigger: CCAGGACTCAGCCATGCACACCTTGAGCAGCGCCGGCAGGAGGCACGGAAGGAACTGTGCTCCGTTCTCCTCACTGTCATGGTGCCACCA
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
3UTR GCA 90 bp GGGCCTGCTACACACTGCTCTGGCCAGGCATTCCACTGGGGCAATTaGCTGCCTGAGAGCGCTCTCAGGATCCATGTCGCTCAAGCTGGC +
Preference number: 1 (lower is better)
Translates to: GPATHCSGQAFHWGN*LPESALRIHVAQAG
Trigger: GCCAGCTTGAGCGACATGGATCCTGAGAGCGCTCTCAGGCAGGCAATTGCCCCAGTGGAATGCCTGGCCAGAGCAGTGTGTAGCAGGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582970.5
3UTR TCA 90 bp AACGGCCTGCAAGCCCGTGTGACTTGTGCCACACGCGCACGGCCGTaGTTCCATATGGAACACATGCAGGATGGTGCGAGCAGCAGGGAC +
Preference number: 1 (lower is better)
Translates to: NGLQARVTCATRARP*FHMEHMQDGASSRD
Trigger: GTCCCTGCTGCTCGCACCATCCTGCATGTGTTCCATATGGAATCACGGCCGTGCGCGTGTGGCACAAGTCACACGGGCTTGCAGGCCGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319921.4
3UTR GCA 90 bp ACCATGACAGTGAGGAGAACGGAGCACAGTTCCTTCCGTGCCTCCTaGCGGCGCTGCTCAAGGTGTGCATGGCTGAGTCCTGGACAAGCA +
Preference number: 1 (lower is better)
Translates to: TMTVRRTEHSSFRAS*RRCSRCAWLSPGQA
Trigger: TGCTTGTCCAGGACTCAGCCATGCACACCTTGAGCAGCGCCGGCAGGAGGCACGGAAGGAACTGTGCTCCGTTCTCCTCACTGTCATGGT
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
3UTR CCA 90 bp TGCCACACGCGCACGGCCGTGATTCCATATGGAACACATGCAGGATaGTGCGAGCAGCAGGGACTGTGCAGCACACTGAGGAATCCGGAG +
Preference number: 1 (lower is better)
Translates to: CHTRTAVIPYGTHAG*CEQQGLCSTLRNPE
Trigger: CTCCGGATTCCTCAGTGTGCTGCACAGTCCCTGCTGCTCGCACCATCCTGCATGTGTTCCATATGGAATCACGGCCGTGCGCGTGTGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319921.4
3UTR GCA 90 bp CACACGCGCACGGCCGTGATTCCATATGGAACACATGCAGGATGGTaGGAGCAGCAGGGACTGTGCAGCACACTGAGGAATCCGGAGAGA +
Preference number: 1 (lower is better)
Translates to: HTRTAVIPYGTHAGW*EQQGLCSTLRNPER
Trigger: TCTCTCCGGATTCCTCAGTGTGCTGCACAGTCCCTGCTGCTCGCACCATCCTGCATGTGTTCCATATGGAATCACGGCCGTGCGCGTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319921.4
3UTR GCA 90 bp ATGACAGGGCCATCTGAGGAACGGCCTGCAAGCCCGTGTGACTTGTaGCACACGCGCACGGCCGTGATTCCATATGGAACACATGCAGGA +
Preference number: 1 (lower is better)
Translates to: MTGPSEERPASPCDL*HTRTAVIPYGTHAG
Trigger: TCCTGCATGTGTTCCATATGGAATCACGGCCGTGCGCGTGTGGCACAAGTCACACGGGCTTGCAGGCCGTTCCTCAGATGGCCCTGTCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319921.4
3UTR CCA 90 bp CATGGACCTGTGGCGATGGGGCAAAGATCGTGGGTTCTGAGGAAGTaGCTGTCCTCTGGGTTGAGGTTCTGTTGCGCTTCAGGGCACAGG +
Preference number: 1 (lower is better)
Translates to: HGPVAMGQRSWVLRK*LSSGLRFCCASGHR
Trigger: CCTGTGCCCTGAAGCGCAACAGAACCTCAACCCAGAGGACAGCCACTTCCTCAGAACCCACGATCTTTGCCCCATCGCCACAGGTCCATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582970.5
3UTR CCA 90 bp CTTAGAGAGGTCGAGCCACTTGCCCATGGCTGTAGAACTGGCAAATaGGAGAGCCAGGACCCACATTCAGGCCTGTCTGGGCTGGGCTGT +
Preference number: 1 (lower is better)
Translates to: LREVEPLAHGCRTGK*ESQDPHSGLSGLGC
Trigger: ACAGCCCAGCCCAGACAGGCCTGAATGTGGGTCCTGGCTCTCCCATTTGCCAGTTCTACAGCCATGGGCAAGTGGCTCGACCTCTCTAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582970.5
3UTR CCA 90 bp GGCGATGGGGCAAAGATCGTGGGTTCTGAGGAAGTGGCTGTCCTCTaGGTTGAGGTTCTGTTGCGCTTCAGGGCACAGGTAGCAGTGATC +
Preference number: 1 (lower is better)
Translates to: GDGAKIVGSEEVAVL*VEVLLRFRAQVAVI
Trigger: GATCACTGCTACCTGTGCCCTGAAGCGCAACAGAACCTCAACCCAGAGGACAGCCACTTCCTCAGAACCCACGATCTTTGCCCCATCGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582970.5
3UTR GCA 90 bp GTGAGGAGAACGGAGCACAGTTCCTTCCGTGCCTCCTGCCGGCGCTaGTCAAGGTGTGCATGGCTGAGTCCTGGACAAGCATTTTGTATT +
Preference number: 1 (lower is better)
Translates to: VRRTEHSSFRASCRR*SRCAWLSPGQAFCI
Trigger: AATACAAAATGCTTGTCCAGGACTCAGCCATGCACACCTTGAGCAGCGCCGGCAGGAGGCACGGAAGGAACTGTGCTCCGTTCTCCTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
3UTR CCA 90 bp TTACTGCCTGCAGTCTGGGTCACTCTGCCCTTCATCAGACACTGGTaGCACCATGACAGTGAGGAGAACGGAGCACAGTTCCTTCCGTGC +
Preference number: 1 (lower is better)
Translates to: LLPAVWVTLPFIRHW*HHDSEENGAQFLPC
Trigger: GCACGGAAGGAACTGTGCTCCGTTCTCCTCACTGTCATGGTGCCACCAGTGTCTGATGAAGGGCAGAGTGACCCAGACTGCAGGCAGTAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
3UTR CCA 90 bp CAGTTACTGCCTGCAGTCTGGGTCACTCTGCCCTTCATCAGACACTaGTGGCACCATGACAGTGAGGAGAACGGAGCACAGTTCCTTCCG +
Preference number: 1 (lower is better)
Translates to: QLLPAVWVTLPFIRH*WHHDSEENGAQFLP
Trigger: CGGAAGGAACTGTGCTCCGTTCTCCTCACTGTCATGGTGCCACCAGTGTCTGATGAAGGGCAGAGTGACCCAGACTGCAGGCAGTAACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
3UTR CCA 90 bp CTTGCCTCTGCCAGCCACTTATGCTGCTGTTCTCTCAACCACTGTTaGGGCGGGCGGGTGGGGAGTCTAAAACCAGCTGTAACCAAGTGT +
Preference number: 1 (lower is better)
Translates to: LASASHLCCCSLNHC*GGRVGSLKPAVTKC
Trigger: ACACTTGGTTACAGCTGGTTTTAGACTCCCCACCCGCCCGCCCCAACAGTGGTTGAGAGAACAGCAGCATAAGTGGCTGGCAGAGGCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582970.5
3UTR TCA 90 bp TGCTACGCTGACAGCTCTCCTTCTGAATGCAAAGGCACCAGTCCATaGTCAAGTCCACGCCGCAGACGAGGAGAGAGGAGTCTTCTCTCC +
Preference number: 1 (lower is better)
Translates to: CYADSSPSECKGTSP*SSPRRRRGERSLLS
Trigger: GGAGAGAAGACTCCTCTCTCCTCGTCTGCGGCGTGGACTTGATCATGGACTGGTGCCTTTGCATTCAGAAGGAGAGCTGTCAGCGTAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
3UTR CCA 90 bp TTTCAGTCCCAGATCGGCTACAGGGAGTGGCGCTCAGCTCCACTGTaGAGTCGCCAGGATGCTGTCATTTTGTCCAGAGGAAAAGTCCAC +
Preference number: 1 (lower is better)
Translates to: FQSQIGYREWRSAPL*SRQDAVILSRGKVH
Trigger: GTGGACTTTTCCTCTGGACAAAATGACAGCATCCTGGCGACTCCACAGTGGAGCTGAGCGCCACTCCCTGTAGCCGATCTGGGACTGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582970.5
3UTR CCA 90 bp CCGTGCCTCCTGCCGGCGCTGCTCAAGGTGTGCATGGCTGAGTCCTaGACAAGCATTTTGTATTTTTGTAGTTCTCACTCCTTAGGCCCA +
Preference number: 1 (lower is better)
Translates to: PCLLPALLKVCMAES*TSILYFCSSHSLGP
Trigger: TGGGCCTAAGGAGTGAGAACTACAAAAATACAAAATGCTTGTCCAGGACTCAGCCATGCACACCTTGAGCAGCGCCGGCAGGAGGCACGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
3UTR GCA 90 bp GGAGCACAGTTCCTTCCGTGCCTCCTGCCGGCGCTGCTCAAGGTGTaGATGGCTGAGTCCTGGACAAGCATTTTGTATTTTTGTAGTTCT +
Preference number: 1 (lower is better)
Translates to: GAQFLPCLLPALLKV*MAESWTSILYFCSS
Trigger: AGAACTACAAAAATACAAAATGCTTGTCCAGGACTCAGCCATGCACACCTTGAGCAGCGCCGGCAGGAGGCACGGAAGGAACTGTGCTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
3UTR TCA 90 bp CTCGGCTTTCAAAAAGCTGTCAGCTCAGGTAGCACGCCTTGGTCTTaGATTCGGTGCTACGCTGACAGCTCTCCTTCTGAATGCAAAGGC +
Preference number: 1 (lower is better)
Translates to: LGFQKAVSSGSTPWS*IRCYADSSPSECKG
Trigger: GCCTTTGCATTCAGAAGGAGAGCTGTCAGCGTAGCACCGAATTCAAGACCAAGGCGTGCTACCTGAGCTGACAGCTTTTTGAAAGCCGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
3UTR GCA 90 bp CAATCACAGATGACTAAATGCCAGGGACTGTGTGAAGTCAGTTACTaGCTGCAGTCTGGGTCACTCTGCCCTTCATCAGACACTGGTGGC +
Preference number: 1 (lower is better)
Translates to: QSQMTKCQGLCEVSY*LQSGSLCPSSDTGG
Trigger: GCCACCAGTGTCTGATGAAGGGCAGAGTGACCCAGACTGCAGGCAGTAACTGACTTCACACAGTCCCTGGCATTTAGTCATCTGTGATTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
3UTR GCA 90 bp GTGTACGGGAACTGGTGTGGGTACCCTGGCTTACAGGTTACCTTGTaGCATACCTTTGAAACAAGGGACCTGTCCAGGCTTCACTCTGAT +
Preference number: 1 (lower is better)
Translates to: VYGNWCGYPGLQVTL*HTFETRDLSRLHSD
Trigger: ATCAGAGTGAAGCCTGGACAGGTCCCTTGTTTCAAAGGTATGGCACAAGGTAACCTGTAAGCCAGGGTACCCACACCAGTTCCCGTACAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582970.5
3UTR CCA 90 bp CACAGTTCCTTCCGTGCCTCCTGCCGGCGCTGCTCAAGGTGTGCATaGCTGAGTCCTGGACAAGCATTTTGTATTTTTGTAGTTCTCACT +
Preference number: 1 (lower is better)
Translates to: HSSFRASCRRCSRCA*LSPGQAFCIFVVLT
Trigger: AGTGAGAACTACAAAAATACAAAATGCTTGTCCAGGACTCAGCCATGCACACCTTGAGCAGCGCCGGCAGGAGGCACGGAAGGAACTGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
3UTR CCA 90 bp GGGGAGTCTAAAACCAGCTGTAACCAAGTGTCTGTGTACGGGAACTaGTGTGGGTACCCTGGCTTACAGGTTACCTTGTGCCATACCTTT +
Preference number: 1 (lower is better)
Translates to: GESKTSCNQVSVYGN*CGYPGLQVTLCHTF
Trigger: AAAGGTATGGCACAAGGTAACCTGTAAGCCAGGGTACCCACACCAGTTCCCGTACACAGACACTTGGTTACAGCTGGTTTTAGACTCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582970.5
3UTR TCA 90 bp CAGTGCCAGAGGCGAACGGGCACAGGTCATTACTGCGTGTGTGGCTaGGCTACAAGTCTCCTGGAATGTAAACAATGTTGGTTTATTTCC +
Preference number: 1 (lower is better)
Translates to: QCQRRTGTGHYCVCG*ATSLLECKQCWFIS
Trigger: GGAAATAAACCAACATTGTTTACATTCCAGGAGACTTGTAGCTCAGCCACACACGCAGTAATGACCTGTGCCCGTTCGCCTCTGGCACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
3UTR GCA 90 bp TGTATCAAATCAGAGGTGTTTTCCTTCAGCACACTAGTGCCTGTGTaGATGGCTAGACTTGGGTGGCTTTACCTACTTGGCCCTGAGCTG +
Preference number: 1 (lower is better)
Translates to: CIKSEVFSFSTLVPV*MARLGWLYLLGPEL
Trigger: CAGCTCAGGGCCAAGTAGGTAAAGCCACCCAAGTCTAGCCATGCACACAGGCACTAGTGTGCTGAAGGAAAACACCTCTGATTTGATACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582970.5
3UTR GCA 90 bp CTCTTTGTCTGTCTCTTCCTCTTTCTCTCTCTGCTGGTCTTTCCTTaGCTCTGCCAGCCACTTATGCTGCTGTTCTCTCAACCACTGTTG +
Preference number: 1 (lower is better)
Translates to: LFVCLFLFLSLLVFP*LCQPLMLLFSQPLL
Trigger: CAACAGTGGTTGAGAGAACAGCAGCATAAGTGGCTGGCAGAGGCAAGGAAAGACCAGCAGAGAGAGAAAGAGGAAGAGACAGACAAAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582970.5
3UTR TCA 90 bp GATCAGAAGAATCTTTGGCGATTAATCCACTCTCCATTTTATGCGTaGGAAAACCAAGGCCCTGATGGTGTCCCTGGTCCAAGTCCAGTG +
Preference number: 1 (lower is better)
Translates to: DQKNLWRLIHSPFYA*ENQGPDGVPGPSPV
Trigger: CACTGGACTTGGACCAGGGACACCATCAGGGCCTTGGTTTTCTCACGCATAAAATGGAGAGTGGATTAATCGCCAAAGATTCTTCTGATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
3UTR CCA 90 bp TTCTCTCTTTGGAGGCAGAAATTGGGCGTAAGACAATATGTGGGGTaGTCTCCTCCCTTAAGAGCACTGACAGATATTTCACAGACGAGG +
Preference number: 1 (lower is better)
Translates to: FSLWRQKLGVRQYVG*SPPLRALTDISQTR
Trigger: CCTCGTCTGTGAAATATCTGTCAGTGCTCTTAAGGGAGGAGACCACCCCACATATTGTCTTACGCCCAATTTCTGCCTCCAAAGAGAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582970.5
3UTR TCA 90 bp CTCTTTGACTTTCCTTTTGCCTCTGTCTCTTTCTCTCTCTCTCTCTaGCTCCCTCTTTGTCTGTCTCTTCCTCTTTCTCTCTCTGCTGGT +
Preference number: 1 (lower is better)
Translates to: LFDFPFASVSFSLSL*LPLCLSLPLSLSAG
Trigger: ACCAGCAGAGAGAGAAAGAGGAAGAGACAGACAAAGAGGGAGTCAGAGAGAGAGAGAGAAAGAGACAGAGGCAAAAGGAAAGTCAAAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582970.5
3UTR CCA 90 bp ATCTTTAACTACCAGGCCCAGGGTGTGGTGCAGGCTGTCTGCTTGTaGATTTCATTTCTGCCTTTTAGTTTTTACTTCTCTCTTTGGAGG +
Preference number: 1 (lower is better)
Translates to: IFNYQAQGVVQAVCL*ISFLPFSFYFSLWR
Trigger: CCTCCAAAGAGAGAAGTAAAAACTAAAAGGCAGAAATGAAATCCACAAGCAGACAGCCTGCACCACACCCTGGGCCTGGTAGTTAAAGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000582970.5
3UTR CCA 90 bp CGGGCACAGGTCATTACTGCGTGTGTGGCTGAGCTACAAGTCTCCTaGAATGTAAACAATGTTGGTTTATTTCCAATTTCATCTAATCTT +
Preference number: 1 (lower is better)
Translates to: RAQVITACVAELQVS*NVNNVGLFPISSNL
Trigger: AAGATTAGATGAAATTGGAAATAAACCAACATTGTTTACATTCCAGGAGACTTGTAGCTCAGCCACACACGCAGTAATGACCTGTGCCCG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
3UTR TCA 90 bp ATAAGCCATACCCAAAAGGCCACATATGATATGATTCCATTCATATaGCAGTCAGAACAGAGAAAGCCACAGAAGCAGTTGTTTATGTTC +
Preference number: 1 (lower is better)
Translates to: ISHTQKATYDMIPFI*QSEQRKPQKQLFMF
Trigger: GAACATAAACAACTGCTTCTGTGGCTTTCTCTGTTCTGACTGTCATATGAATGGAATCATATCATATGTGGCCTTTTGGGTATGGCTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319921.4
3UTR-3UTR GCA 90 bp GGGCAGCCGTGGCCAGCAGGGAGCTTCCTCATGTGGCATTGCCTGCGAGACTGTAGCCCGTGTGACTTGTaGCACACGCGCACGGCCGTG +
Preference number: 2 (lower is better)
Translates to: GQPWPAGSFLMWHCLRDCSPCDL*HTRTAV
Trigger: CACGGCCGTGCGCGTGTGGCACAAGTCACACGGGCT...ACAGTCTCGCAGGCAATGCCACATGAGGAAGCTCCCTGCTGGCCACGGCTGCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319921.4
3UTR-3UTR GCA 90 bp TCAGCAAGCCAGCCCCCGGCCCCCACACCCGTTCATAGGCAGTCGGAATGCAGAGCCTCCTGCCGGCGCTaGTCAAGGTGTGCATGGCTG +
Preference number: 2 (lower is better)
Translates to: SASQPPAPTPVHRQSECRASCRR*SRCAWL
Trigger: CAGCCATGCACACCTTGAGCAGCGCCGGCAGGAGGC...TCTGCATTCCGACTGCCTATGAACGGGTGTGGGGGCCGGGGGCTGGCTTGCTGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
3UTR-3UTR TCA 90 bp GGGCAGCCGTGGCCAGCAGGGAGCTTCCTCATGTGGCATTGCCTGCGAGACTGTGATGACAGGGCCATCTaGGGAACGGCCTGCAAGCCC +
Preference number: 2 (lower is better)
Translates to: GQPWPAGSFLMWHCLRDCDDRAI*GTACKP
Trigger: GGGCTTGCAGGCCGTTCCTCAGATGGCCCTGTCATC...ACAGTCTCGCAGGCAATGCCACATGAGGAAGCTCCCTGCTGGCCACGGCTGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319921.4
3UTR-3UTR GCA 90 bp GGGCAGCCGTGGCCAGCAGGGAGCTTCCTCATGTGGCATTGCCTGCGAGACTGTGAGCAGCAGGGACTGTaGAGCACACTGAGGAATCCG +
Preference number: 2 (lower is better)
Translates to: GQPWPAGSFLMWHCLRDCEQQGL*STLRNP
Trigger: CGGATTCCTCAGTGTGCTGCACAGTCCCTGCTGCTC...ACAGTCTCGCAGGCAATGCCACATGAGGAAGCTCCCTGCTGGCCACGGCTGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319921.4
3UTR-3UTR CCA 90 bp CGGGGGCCTGCTACACACTGCTCTGGCCAGGCATTCCACTGGGGCAATTGCCTGGATCTCGGTGGCAGGTaGCTCTGCACAGTCCAGAGT +
Preference number: 2 (lower is better)
Translates to: RGPATHCSGQAFHWGNCLDLGGR*LCTVQS
Trigger: ACTCTGGACTGTGCAGAGCCACCTGCCACCGAGATC...CAGGCAATTGCCCCAGTGGAATGCCTGGCCAGAGCAGTGTGTAGCAGGCCCCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000582970.5
3UTR-3UTR TCA 90 bp ATTGTTTATGCCTGCAGAGGGGAGTGGGTGACTAGAGGGGAGGAGGATGATGGCGCCTGCAAGCCCGTGTaGCTTGTGCCACACGCGCAC +
Preference number: 2 (lower is better)
Translates to: IVYACRGEWVTRGEEDDGACKPV*LVPHAH
Trigger: GTGCGCGTGTGGCACAAGTCACACGGGCTTGCAGGC...GCCATCATCCTCCTCCCCTCTAGTCACCCACTCCCCTCTGCAGGCATAAACAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319921.4
3UTR-3UTR TCA 90 bp CGGGGGCCTGCTACACACTGCTCTGGCCAGGCATTCCACTGGGGCAATTGCCTGATGCCAGGGACTGTGTaGAGTCAGTTACTGCCTGCA +
Preference number: 2 (lower is better)
Translates to: RGPATHCSGQAFHWGNCLMPGTV*SQLLPA
Trigger: TGCAGGCAGTAACTGACTTCACACAGTCCCTGGCAT...CAGGCAATTGCCCCAGTGGAATGCCTGGCCAGAGCAGTGTGTAGCAGGCCCCCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000582970.5
3UTR CAA 90 bp GTGATGACAGGGCCATCTGAGGAACGGCCTGCAAGCCCGTGTGACTaGTGCCACACGCGCACGGCCGTGATTCCATATGGAACACATGCA +
Preference number: 2 (lower is better)
Translates to: VMTGPSEERPASPCD*CHTRTAVIPYGTHA
Trigger: TGCATGTGTTCCATATGGAATCACGGCCGTGCGCGTGTGGCACAAGTCACACGGGCTTGCAGGCCGTTCCTCAGATGGCCCTGTCATCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319921.4
3UTR-3UTR GCA 90 bp TCAGCAAGCCAGCCCCCGGCCCCCACACCCGTTCATAGGCAGTCGGAATGCAGATGTGAAGTCAGTTACTaGCTGCAGTCTGGGTCACTC +
Preference number: 2 (lower is better)
Translates to: SASQPPAPTPVHRQSECRCEVSY*LQSGSL
Trigger: GAGTGACCCAGACTGCAGGCAGTAACTGACTTCACA...TCTGCATTCCGACTGCCTATGAACGGGTGTGGGGGCCGGGGGCTGGCTTGCTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
3UTR-3UTR GCA 90 bp AGAGGTGTAAGCGTTTCAGTCCCAGATCGGCTACAGGGAGTGGCGCTCAGCTCCAGTCTGGGTGTGAGCTaGCACCTGACAGCCAGCTCT +
Preference number: 2 (lower is better)
Translates to: RGVSVSVPDRLQGVALSSSLGVS*HLTASS
Trigger: AGAGCTGGCTGTCAGGTGGCAGCTCACACCCAGACT...GGAGCTGAGCGCCACTCCCTGTAGCCGATCTGGGACTGAAACGCTTACACCTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582970.5
3UTR-3UTR CCA 90 bp TCAGCAAGCCAGCCCCCGGCCCCCACACCCGTTCATAGGCAGTCGGAATGCAGATTCATCAGACACTGGTaGCACCATGACAGTGAGGAG +
Preference number: 2 (lower is better)
Translates to: SASQPPAPTPVHRQSECRFIRHW*HHDSEE
Trigger: CTCCTCACTGTCATGGTGCCACCAGTGTCTGATGAA...TCTGCATTCCGACTGCCTATGAACGGGTGTGGGGGCCGGGGGCTGGCTTGCTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
3UTR-3UTR GCA 90 bp GGAATGCAGATCTCGGTGGCAGGTGGCTCTGCACAGTCCAGAGTGATAAAACAAGCACAGTTCCTTCCGTaGCTCCTGCCGGCGCTGCTC +
Preference number: 2 (lower is better)
Translates to: GMQISVAGGSAQSRVIKQAQFLP*LLPALL
Trigger: GAGCAGCGCCGGCAGGAGGCACGGAAGGAACTGTGC...TTGTTTTATCACTCTGGACTGTGCAGAGCCACCTGCCACCGAGATCTGCATTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
3UTR-3UTR GCA 90 bp CAGATCTCGGTGGCAGGTGGCTCTGCACAGTCCAGAGTGATAAAACAATCACAGGCACAGTTCCTTCCGTaGCTCCTGCCGGCGCTGCTC +
Preference number: 2 (lower is better)
Translates to: QISVAGGSAQSRVIKQSQAQFLP*LLPALL
Trigger: GAGCAGCGCCGGCAGGAGGCACGGAAGGAACTGTGC...CTGTGATTGTTTTATCACTCTGGACTGTGCAGAGCCACCTGCCACCGAGATCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
3UTR CAA 90 bp GAGTGGCGCTCAGCTCCACTGTGGAGTCGCCAGGATGCTGTCATTTaGTCCAGAGGAAAAGTCCACCGTCTCACATGTGAAGGCAGAGCC +
Preference number: 2 (lower is better)
Translates to: EWRSAPLWSRQDAVI*SRGKVHRLTCEGRA
Trigger: GGCTCTGCCTTCACATGTGAGACGGTGGACTTTTCCTCTGGACAAAATGACAGCATCCTGGCGACTCCACAGTGGAGCTGAGCGCCACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582970.5
3UTR-3UTR TCA 90 bp CACTGGTGGCACCATGACAGTGAGGAGAACGGAGCACAGTTCCTTCCGTGCCTCTACTGCGTGTGTGGCTaGGCTACAAGTCTCCTGGAA +
Preference number: 2 (lower is better)
Translates to: HWWHHDSEENGAQFLPCLYCVCG*ATSLLE
Trigger: TTCCAGGAGACTTGTAGCTCAGCCACACACGCAGTA...GAGGCACGGAAGGAACTGTGCTCCGTTCTCCTCACTGTCATGGTGCCACCAGTG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
3UTR-3UTR TCA 90 bp CGGGGGCCTGCTACACACTGCTCTGGCCAGGCATTCCACTGGGGCAATTGCCTGATTAGGTGTGACTTCTaGCCAAAGTTGCTCTGGTTG +
Preference number: 2 (lower is better)
Translates to: RGPATHCSGQAFHWGNCLIRCDF*PKLLWL
Trigger: CAACCAGAGCAACTTTGGTCAGAAGTCACACCTAAT...CAGGCAATTGCCCCAGTGGAATGCCTGGCCAGAGCAGTGTGTAGCAGGCCCCCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000582970.5
3UTR-3UTR GCA 90 bp GCCAGCTCTGAGGTATCAAAGGAGCTCCGAGTGCAAGTTGAAGACTTCAGCAAGAAGAGGGGTGGGCAGTaGCAGAGGCGAACGGGCACA +
Preference number: 2 (lower is better)
Translates to: ASSEVSKELRVQVEDFSKKRGGQ*QRRTGT
Trigger: TGTGCCCGTTCGCCTCTGGCACTGCCCACCCCTCTT...CTTGCTGAAGTCTTCAACTTGCACTCGGAGCTCCTTTGATACCTCAGAGCTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
3UTR-3UTR TCA 90 bp GGGGAGTCTAAAACCAGCTGTAACCAAGTGTCTGTGTACGGGAACTGGTGTGGGAAAGGCACCAGTCCATaGTCAAGTCCACGCCGCAGA +
Preference number: 2 (lower is better)
Translates to: GESKTSCNQVSVYGNWCGKGTSP*SSPRRR
Trigger: TCTGCGGCGTGGACTTGATCATGGACTGGTGCCTTT...CCCACACCAGTTCCCGTACACAGACACTTGGTTACAGCTGGTTTTAGACTCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582970.5
3UTR-3UTR TCA 90 bp TTTATGCGTGAGAAAACCAAGGCCCTGATGGTGTCCCTGGTCCAAGTCCAGTGCAGCACGCCTTGGTCTTaGATTCGGTGCTACGCTGAC +
Preference number: 2 (lower is better)
Translates to: FMREKTKALMVSLVQVQCSTPWS*IRCYAD
Trigger: GTCAGCGTAGCACCGAATTCAAGACCAAGGCGTGCT...GCACTGGACTTGGACCAGGGACACCATCAGGGCCTTGGTTTTCTCACGCATAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
3UTR-3UTR GCA 90 bp GGAATGCAGATCTCGGTGGCAGGTGGCTCTGCACAGTCCAGAGTGATAAAACAAGCGCTGCTCAAGGTGTaGATGGCTGAGTCCTGGACA +
Preference number: 2 (lower is better)
Translates to: GMQISVAGGSAQSRVIKQALLKV*MAESWT
Trigger: TGTCCAGGACTCAGCCATGCACACCTTGAGCAGCGC...TTGTTTTATCACTCTGGACTGTGCAGAGCCACCTGCCACCGAGATCTGCATTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
3UTR-3UTR CCA 90 bp AGCTCCGAGTGCAAGTTGAAGACTTCAGCAAGCCAGCCCCCGGCCCCCACACCCGAGCTACAAGTCTCCTaGAATGTAAACAATGTTGGT +
Preference number: 2 (lower is better)
Translates to: SSECKLKTSASQPPAPTPELQVS*NVNNVG
Trigger: ACCAACATTGTTTACATTCCAGGAGACTTGTAGCTC...GGGTGTGGGGGCCGGGGGCTGGCTTGCTGAAGTCTTCAACTTGCACTCGGAGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
3UTR-3UTR CCA 90 bp GGGGTGGGCAGTGCCAGAGGCGAACGGGCACAGGTCATTACTGCGTGTGTGGCTGAGCTACAAGTCTCCTaGAATGTAAACAATGTTGGT +
Preference number: 2 (lower is better)
Translates to: GVGSARGERAQVITACVAELQVS*NVNNVG
Trigger: ACCAACATTGTTTACATTCCAGGAGACTTGTAGCTC...AGCCACACACGCAGTAATGACCTGTGCCCGTTCGCCTCTGGCACTGCCCACCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
3UTR-3UTR TCA 90 bp CAGATCTCGGTGGCAGGTGGCTCTGCACAGTCCAGAGTGATAAAACAATCACAGAAAGGCACCAGTCCATaGTCAAGTCCACGCCGCAGA +
Preference number: 2 (lower is better)
Translates to: QISVAGGSAQSRVIKQSQKGTSP*SSPRRR
Trigger: TCTGCGGCGTGGACTTGATCATGGACTGGTGCCTTT...CTGTGATTGTTTTATCACTCTGGACTGTGCAGAGCCACCTGCCACCGAGATCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
3UTR-3UTR TCA 90 bp GGAGAACGGAGCACAGTTCCTTCCGTGCCTCCTGCCGGCGCTGCTCAAGGTGTGGTTTTGTATGTGCTCTaGGTCCTAGTTTTTATGTCT +
Preference number: 2 (lower is better)
Translates to: GERSTVPSVPPAGAAQGVVLYVL*VLVFMS
Trigger: AGACATAAAAACTAGGACTCAGAGCACATACAAAAC...CACACCTTGAGCAGCGCCGGCAGGAGGCACGGAAGGAACTGTGCTCCGTTCTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
3UTR-3UTR GCA 90 bp TGCACTTTCCTGGCGCTTGTTTTTCCAGCTGGAAACGGGATTCGTAATGGTAATAAGAGGGGTGGGCAGTaGCAGAGGCGAACGGGCACA +
Preference number: 2 (lower is better)
Translates to: CTFLALVFPAGNGIRNGNKRGGQ*QRRTGT
Trigger: TGTGCCCGTTCGCCTCTGGCACTGCCCACCCCTCTT...ATTACCATTACGAATCCCGTTTCCAGCTGGAAAAACAAGCGCCAGGAAAGTGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000582970.5
3UTR-3UTR GCA 90 bp GTTCTAGACCACAGGTTTCTCGCCTGGAAGAACCTTTCCTTTTTGGAAGAGAAAGCCTCCTGCCGGCGCTaGTCAAGGTGTGCATGGCTG +
Preference number: 2 (lower is better)
Translates to: VLDHRFLAWKNLSFLEEKASCRR*SRCAWL
Trigger: CAGCCATGCACACCTTGAGCAGCGCCGGCAGGAGGC...TTTCTCTTCCAAAAAGGAAAGGTTCTTCCAGGCGAGAAACCTGTGGTCTAGAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000582970.5
3UTR-3UTR GCA 90 bp GCCAGCTCTGAGGTATCAAAGGAGCTCCGAGTGCAAGTTGAAGACTTCAGCAAGCATAGGCAGTCGGAATaGAGATCTCGGTGGCAGGTG +
Preference number: 2 (lower is better)
Translates to: ASSEVSKELRVQVEDFSKHRQSE*RSRWQV
Trigger: CACCTGCCACCGAGATCTGCATTCCGACTGCCTATG...CTTGCTGAAGTCTTCAACTTGCACTCGGAGCTCCTTTGATACCTCAGAGCTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
3UTR-3UTR CCA 90 bp ATTGTTTATGCCTGCAGAGGGGAGTGGGTGACTAGAGGGGAGGAGGATGATGGCGGCCGTGATTCCATATaGAACACATGCAGGATGGTG +
Preference number: 2 (lower is better)
Translates to: IVYACRGEWVTRGEEDDGGRDSI*NTCRMV
Trigger: CACCATCCTGCATGTGTTCCATATGGAATCACGGCC...GCCATCATCCTCCTCCCCTCTAGTCACCCACTCCCCTCTGCAGGCATAAACAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319921.4
3UTR CAA 90 bp ACTGGTGTGGGTACCCTGGCTTACAGGTTACCTTGTGCCATACCTTaGAAACAAGGGACCTGTCCAGGCTTCACTCTGATGGCCAACCTA +
Preference number: 2 (lower is better)
Translates to: TGVGTLAYRLPCAIP*KQGTCPGFTLMANL
Trigger: TAGGTTGGCCATCAGAGTGAAGCCTGGACAGGTCCCTTGTTTCAAAGGTATGGCACAAGGTAACCTGTAAGCCAGGGTACCCACACCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582970.5
3UTR CAA 90 bp TCTGTGTACGGGAACTGGTGTGGGTACCCTGGCTTACAGGTTACCTaGTGCCATACCTTTGAAACAAGGGACCTGTCCAGGCTTCACTCT +
Preference number: 2 (lower is better)
Translates to: SVYGNWCGYPGLQVT*CHTFETRDLSRLHS
Trigger: AGAGTGAAGCCTGGACAGGTCCCTTGTTTCAAAGGTATGGCACAAGGTAACCTGTAAGCCAGGGTACCCACACCAGTTCCCGTACACAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582970.5
3UTR-3UTR TCA 90 bp TTTCAGGCAGGGCATGGGGGACTCCTTCTGAGGCAGAGGTGTAAGCGTTTCAGTCATGCGAGAGCACACTaGGACTGCATGTTTATTTGG +
Preference number: 2 (lower is better)
Translates to: FQAGHGGLLLRQRCKRFSHARAH*DCMFIW
Trigger: CCAAATAAACATGCAGTCTCAGTGTGCTCTCGCATG...ACTGAAACGCTTACACCTCTGCCTCAGAAGGAGTCCCCCATGCCCTGCCTGAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000582970.5
3UTR-3UTR GCA 90 bp GGAATGCAGATCTCGGTGGCAGGTGGCTCTGCACAGTCCAGAGTGATAAAACAAAAGTCAGTTACTGCCTaGAGTCTGGGTCACTCTGCC +
Preference number: 2 (lower is better)
Translates to: GMQISVAGGSAQSRVIKQKSVTA*SLGHSA
Trigger: GGCAGAGTGACCCAGACTGCAGGCAGTAACTGACTT...TTGTTTTATCACTCTGGACTGTGCAGAGCCACCTGCCACCGAGATCTGCATTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
3UTR-3UTR GCA 90 bp TTCCAAAGACCAGTCTTACCAAGTTTCAGATGTCTGGACTCCAAGTGGCAGTTCCTGTACCCCGTTAGCTaGAGCCCCGCTGTGTCCAGT +
Preference number: 2 (lower is better)
Translates to: FQRPVLPSFRCLDSKWQFLYPVS*SPAVSS
Trigger: ACTGGACACAGCGGGGCTGCAGCTAACGGGGTACAG...GAACTGCCACTTGGAGTCCAGACATCTGAAACTTGGTAAGACTGGTCTTTGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582970.5
3UTR-3UTR GCA 90 bp GGGGAGTCTAAAACCAGCTGTAACCAAGTGTCTGTGTACGGGAACTGGTGTGGGAAGCAGAAAGAACTCTaGAGCAGGGAACTGTCCAGG +
Preference number: 2 (lower is better)
Translates to: GESKTSCNQVSVYGNWCGKQKEL*SRELSR
Trigger: CCTGGACAGTTCCCTGCTGCAGAGTTCTTTCTGCTT...CCCACACCAGTTCCCGTACACAGACACTTGGTTACAGCTGGTTTTAGACTCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582970.5
3UTR-3UTR CCA 90 bp AGGAGGATGATGGCTAAAGGGGCCGGGTTTCTCTTTGAAGTGATGAAAATGCTCGGAACACATGCAGGATaGTGCGAGCAGCAGGGACTG +
Preference number: 2 (lower is better)
Translates to: RRMMAKGAGFLFEVMKMLGTHAG*CEQQGL
Trigger: CAGTCCCTGCTGCTCGCACCATCCTGCATGTGTTCC...GAGCATTTTCATCACTTCAAAGAGAAACCCGGCCCCTTTAGCCATCATCCTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319921.4
3UTR-3UTR CCA 90 bp TCAGCAAGCCAGCCCCCGGCCCCCACACCCGTTCATAGGCAGTCGGAATGCAGATTTTTCACATCATCGTaGGAACCCAGAAATATATGT +
Preference number: 2 (lower is better)
Translates to: SASQPPAPTPVHRQSECRFFTSS*EPRNIC
Trigger: ACATATATTTCTGGGTTCCCACGATGATGTGAAAAA...TCTGCATTCCGACTGCCTATGAACGGGTGTGGGGGCCGGGGGCTGGCTTGCTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
3UTR-3UTR CCA 90 bp CAGATCTCGGTGGCAGGTGGCTCTGCACAGTCCAGAGTGATAAAACAATCACAGCCCTTCATCAGACACTaGTGGCACCATGACAGTGAG +
Preference number: 2 (lower is better)
Translates to: QISVAGGSAQSRVIKQSQPFIRH*WHHDSE
Trigger: CTCACTGTCATGGTGCCACCAGTGTCTGATGAAGGG...CTGTGATTGTTTTATCACTCTGGACTGTGCAGAGCCACCTGCCACCGAGATCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
3UTR-3UTR TCA 90 bp GATCAGCAAGACACAGCAAATCTGTCAACCCAGCTCAACTGTCATAGCTGTCCTGAGGCTGTGGGCACGTaGCTTCCAATACAGTGTCAC +
Preference number: 2 (lower is better)
Translates to: DQQDTANLSTQLNCHSCPEAVGT*LPIQCH
Trigger: GTGACACTGTATTGGAAGTCACGTGCCCACAGCCTC...AGGACAGCTATGACAGTTGAGCTGGGTTGACAGATTTGCTGTGTCTTGCTGATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573038.1
3UTR-3UTR GCA 90 bp TTCCAAAGACCAGTCTTACCAAGTTTCAGATGTCTGGACTCCAAGTGGCAGTTCGCGCTGCTCAAGGTGTaGATGGCTGAGTCCTGGACA +
Preference number: 2 (lower is better)
Translates to: FQRPVLPSFRCLDSKWQFALLKV*MAESWT
Trigger: TGTCCAGGACTCAGCCATGCACACCTTGAGCAGCGC...GAACTGCCACTTGGAGTCCAGACATCTGAAACTTGGTAAGACTGGTCTTTGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582970.5
3UTR-3UTR CCA 90 bp GGGGAGTCTAAAACCAGCTGTAACCAAGTGTCTGTGTACGGGAACTGGTGTGGGTCATTACTGCGTGTGTaGCTGAGCTACAAGTCTCCT +
Preference number: 2 (lower is better)
Translates to: GESKTSCNQVSVYGNWCGSLLRV*LSYKSP
Trigger: AGGAGACTTGTAGCTCAGCCACACACGCAGTAATGA...CCCACACCAGTTCCCGTACACAGACACTTGGTTACAGCTGGTTTTAGACTCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582970.5
3UTR CAA 90 bp CCTCTTTGTCTGTCTCTTCCTCTTTCTCTCTCTGCTGGTCTTTCCTaGCCTCTGCCAGCCACTTATGCTGCTGTTCTCTCAACCACTGTT +
Preference number: 2 (lower is better)
Translates to: PLCLSLPLSLSAGLS*PLPATYAAVLSTTV
Trigger: AACAGTGGTTGAGAGAACAGCAGCATAAGTGGCTGGCAGAGGCAAGGAAAGACCAGCAGAGAGAGAAAGAGGAAGAGACAGACAAAGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582970.5
3UTR-3UTR TCA 90 bp TTCCAAAGACCAGTCTTACCAAGTTTCAGATGTCTGGACTCCAAGTGGCAGTTCAGCACGCCTTGGTCTTaGATTCGGTGCTACGCTGAC +
Preference number: 2 (lower is better)
Translates to: FQRPVLPSFRCLDSKWQFSTPWS*IRCYAD
Trigger: GTCAGCGTAGCACCGAATTCAAGACCAAGGCGTGCT...GAACTGCCACTTGGAGTCCAGACATCTGAAACTTGGTAAGACTGGTCTTTGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582970.5
3UTR-3UTR TCA 90 bp GGAATGCAGATCTCGGTGGCAGGTGGCTCTGCACAGTCCAGAGTGATAAAACAAAAGGCAACACGTCAGTaGGAAAAGCAGCACAAGATC +
Preference number: 2 (lower is better)
Translates to: GMQISVAGGSAQSRVIKQKATRQ*EKQHKI
Trigger: GATCTTGTGCTGCTTTTCTCACTGACGTGTTGCCTT...TTGTTTTATCACTCTGGACTGTGCAGAGCCACCTGCCACCGAGATCTGCATTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
3UTR-3UTR GCA 90 bp AGGAGGATGATGGCTAAAGGGGCCGGGTTTCTCTTTGAAGTGATGAAAATGCTCTCATGTGGCATTGCCTaGGAGACTGTTCCTGGGAGA +
Preference number: 2 (lower is better)
Translates to: RRMMAKGAGFLFEVMKMLSCGIA*ETVPGR
Trigger: TCTCCCAGGAACAGTCTCGCAGGCAATGCCACATGA...GAGCATTTTCATCACTTCAAAGAGAAACCCGGCCCCTTTAGCCATCATCCTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319921.4
3UTR-3UTR CCA 90 bp TTCCAGCAGGGTCTCAAAGGAAGTAATGGGCATAAATCAAAAGGCGCTGCTGATTCCTGTTCCAGCCACTaGTTCACGCACACTAGCCAG +
Preference number: 2 (lower is better)
Translates to: FQQGLKGSNGHKSKGAADSCSSH*FTHTSQ
Trigger: CTGGCTAGTGTGCGTGAACCAGTGGCTGGAACAGGA...ATCAGCAGCGCCTTTTGATTTATGCCCATTACTTCCTTTGAGACCCTGCTGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573038.1
3UTR-3UTR TCA 90 bp TTCCAGCAGGGTCTCAAAGGAAGTAATGGGCATAAATCAAAAGGCGCTGCTGATCAATACAGTGTCACGTaGTGGGCTGCATCAGTGGTC +
Preference number: 2 (lower is better)
Translates to: FQQGLKGSNGHKSKGAADQYSVT*WAASVV
Trigger: GACCACTGATGCAGCCCATCACGTGACACTGTATTG...ATCAGCAGCGCCTTTTGATTTATGCCCATTACTTCCTTTGAGACCCTGCTGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573038.1
3UTR-3UTR GCA 90 bp TGCACTTTCCTGGCGCTTGTTTTTCCAGCTGGAAACGGGATTCGTAATGGTAATCAGTCTGGGTCACTCTaGCCTTCATCAGACACTGGT +
Preference number: 2 (lower is better)
Translates to: CTFLALVFPAGNGIRNGNQSGSL*PSSDTG
Trigger: ACCAGTGTCTGATGAAGGGCAGAGTGACCCAGACTG...ATTACCATTACGAATCCCGTTTCCAGCTGGAAAAACAAGCGCCAGGAAAGTGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000582970.5
3UTR-3UTR CCA 90 bp CACTGGTGGCACCATGACAGTGAGGAGAACGGAGCACAGTTCCTTCCGTGCCTCTTTTTCACATCATCGTaGGAACCCAGAAATATATGT +
Preference number: 2 (lower is better)
Translates to: HWWHHDSEENGAQFLPCLFFTSS*EPRNIC
Trigger: ACATATATTTCTGGGTTCCCACGATGATGTGAAAAA...GAGGCACGGAAGGAACTGTGCTCCGTTCTCCTCACTGTCATGGTGCCACCAGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
3UTR CAA 90 bp TCAAAGGAAGTAATGGGCATAAATCAAAAGGCGCTGCTGATGGACTaGGCAGATCAGCAAGACACAGCAAATCTGTCAACCCAGCTCAAC +
Preference number: 2 (lower is better)
Translates to: SKEVMGINQKALLMD*ADQQDTANLSTQLN
Trigger: GTTGAGCTGGGTTGACAGATTTGCTGTGTCTTGCTGATCTGCCAAGTCCATCAGCAGCGCCTTTTGATTTATGCCCATTACTTCCTTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573038.1
3UTR-3UTR TCA 90 bp TGCTGGCCAGTCTATCTTACACAAAGTTTTAAGTTTTCCTGGTGTCATAGTACTCCTGACAGCCAGCTCTaGGGTATCAAAGGAGCTCCG +
Preference number: 2 (lower is better)
Translates to: CWPVYLTQSFKFSWCHSTPDSQL*GIKGAP
Trigger: CGGAGCTCCTTTGATACCTCAGAGCTGGCTGTCAGG...AGTACTATGACACCAGGAAAACTTAAAACTTTGTGTAAGATAGACTGGCCAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582970.5
3UTR-3UTR TCA 90 bp TGCACTTTCCTGGCGCTTGTTTTTCCAGCTGGAAACGGGATTCGTAATGGTAATACATACAGGAGTAACTaGAATAGCTCAGGGCCGTCT +
Preference number: 2 (lower is better)
Translates to: CTFLALVFPAGNGIRNGNTYRSN*NSSGPS
Trigger: AGACGGCCCTGAGCTATTTCAGTTACTCCTGTATGT...ATTACCATTACGAATCCCGTTTCCAGCTGGAAAAACAAGCGCCAGGAAAGTGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000582970.5
3UTR-3UTR GCA 90 bp GTCTCTTCTAAAAATACAAAAGGAACCGAGTGTGGCGGCACATTGTTCTTTAAAACACATGCAGGATGGTaGGAGCAGCAGGGACTGTGC +
Preference number: 2 (lower is better)
Translates to: VSSKNTKGTECGGTLFFKTHAGW*EQQGLC
Trigger: GCACAGTCCCTGCTGCTCGCACCATCCTGCATGTGT...TTTAAAGAACAATGTGCCGCCACACTCGGTTCCTTTTGTATTTTTAGAAGAGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000319921.4
3UTR-3UTR GCA 90 bp TGCACTTTCCTGGCGCTTGTTTTTCCAGCTGGAAACGGGATTCGTAATGGTAATCAAAGGAGCTCCGAGTaGAAGTTGAAGACTTCAGCA +
Preference number: 2 (lower is better)
Translates to: CTFLALVFPAGNGIRNGNQRSSE*KLKTSA
Trigger: TGCTGAAGTCTTCAACTTGCACTCGGAGCTCCTTTG...ATTACCATTACGAATCCCGTTTCCAGCTGGAAAAACAAGCGCCAGGAAAGTGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000582970.5
3UTR-3UTR GCA 90 bp TGCTGGCCAGTCTATCTTACACAAAGTTTTAAGTTTTCCTGGTGTCATAGTACTACTGGGGCAATTGCCTaGCTGAGAGCGCTCTCAGGA +
Preference number: 2 (lower is better)
Translates to: CWPVYLTQSFKFSWCHSTTGAIA*LRALSG
Trigger: TCCTGAGAGCGCTCTCAGGCAGGCAATTGCCCCAGT...AGTACTATGACACCAGGAAAACTTAAAACTTTGTGTAAGATAGACTGGCCAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000582970.5
3UTR-3UTR TCA 90 bp GTCTCTTCTAAAAATACAAAAGGAACCGAGTGTGGCGGCACATTGTTCTTTAAAACACGCGCACGGCCGTaGTTCCATATGGAACACATG +
Preference number: 2 (lower is better)
Translates to: VSSKNTKGTECGGTLFFKTRARP*FHMEHM
Trigger: CATGTGTTCCATATGGAATCACGGCCGTGCGCGTGT...TTTAAAGAACAATGTGCCGCCACACTCGGTTCCTTTTGTATTTTTAGAAGAGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000319921.4
3UTR-3UTR GCA 90 bp GGAATGCAGATCTCGGTGGCAGGTGGCTCTGCACAGTCCAGAGTGATAAAACAAAAGGCACTCACAAAATaGCCTGATTTTTCTTGTCTT +
Preference number: 2 (lower is better)
Translates to: GMQISVAGGSAQSRVIKQKALTK*PDFSCL
Trigger: AAGACAAGAAAAATCAGGGCATTTTGTGAGTGCCTT...TTGTTTTATCACTCTGGACTGTGCAGAGCCACCTGCCACCGAGATCTGCATTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
3UTR-3UTR CCA 90 bp GTCTCTTCTAAAAATACAAAAGGAACCGAGTGTGGCGGCACATTGTTCTTTAAAGGGAGCTTCCTCATGTaGCATTGCCTGCGAGACTGT +
Preference number: 2 (lower is better)
Translates to: VSSKNTKGTECGGTLFFKGSFLM*HCLRDC
Trigger: ACAGTCTCGCAGGCAATGCCACATGAGGAAGCTCCC...TTTAAAGAACAATGTGCCGCCACACTCGGTTCCTTTTGTATTTTTAGAAGAGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000319921.4
3UTR-3UTR CCA 90 bp TGCACTTTCCTGGCGCTTGTTTTTCCAGCTGGAAACGGGATTCGTAATGGTAATCACAGGTTTCTCGCCTaGAAGAACCTTTCCTTTTTG +
Preference number: 2 (lower is better)
Translates to: CTFLALVFPAGNGIRNGNHRFLA*KNLSFL
Trigger: CAAAAAGGAAAGGTTCTTCCAGGCGAGAAACCTGTG...ATTACCATTACGAATCCCGTTTCCAGCTGGAAAAACAAGCGCCAGGAAAGTGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000582970.5
3UTR-3UTR TCA 90 bp TCACAATTTCAAAATGTCAGATCAGAAGAATCTTTGGCGATTAATCCACTCTCCAGAAAACCAAGGCCCTaGTGGTGTCCCTGGTCCAAG +
Preference number: 2 (lower is better)
Translates to: SQFQNVRSEESLAINPLSRKPRP*WCPWSK
Trigger: CTTGGACCAGGGACACCATCAGGGCCTTGGTTTTCT...GGAGAGTGGATTAATCGCCAAAGATTCTTCTGATCTGACATTTTGAAATTGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
3UTR-3UTR GCA 90 bp GTCTCTTCTAAAAATACAAAAGGAACCGAGTGTGGCGGCACATTGTTCTTTAAATTCCTCATGTGGCATTaGCTGCGAGACTGTTCCTGG +
Preference number: 2 (lower is better)
Translates to: VSSKNTKGTECGGTLFFKFLMWH*LRDCSW
Trigger: CCAGGAACAGTCTCGCAGGCAATGCCACATGAGGAA...TTTAAAGAACAATGTGCCGCCACACTCGGTTCCTTTTGTATTTTTAGAAGAGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000319921.4
3UTR-3UTR GCA 90 bp TGCTGGCCAGTCTATCTTACACAAAGTTTTAAGTTTTCCTGGTGTCATAGTACTGCAATCATAGCTCACTaGAGCCTCAAACTCCCAGGC +
Preference number: 2 (lower is better)
Translates to: CWPVYLTQSFKFSWCHSTAIIAH*SLKLPG
Trigger: GCCTGGGAGTTTGAGGCTGCAGTGAGCTATGATTGC...AGTACTATGACACCAGGAAAACTTAAAACTTTGTGTAAGATAGACTGGCCAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582970.5
3UTR-3UTR GCA 90 bp AGAATGAATATTAAGGATACTGCCTCTAACATATCAATAGCTGTGCTGAGCTGTAAGTCCGCAAAGAACTaGCAGAACCAGGCCTGTGAC +
Preference number: 2 (lower is better)
Translates to: RMNIKDTASNISIAVLSCKSAKN*QNQACD
Trigger: GTCACAGGCCTGGTTCTGGCAGTTCTTTGCGGACTT...ACAGCTCAGCACAGCTATTGATATGTTAGAGGCAGTATCCTTAATATTCATTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
3UTR-3UTR TCA 90 bp GTCTCTTCTAAAAATACAAAAGGAACCGAGTGTGGCGGCACATTGTTCTTTAAAGTCCCCGGAATTCAATaGCCTCAATGTTTCTGGACT +
Preference number: 2 (lower is better)
Translates to: VSSKNTKGTECGGTLFFKVPGIQ*PQCFWT
Trigger: AGTCCAGAAACATTGAGGTCATTGAATTCCGGGGAC...TTTAAAGAACAATGTGCCGCCACACTCGGTTCCTTTTGTATTTTTAGAAGAGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000319921.4
3UTR-3UTR GCA 90 bp ATGGCATACGAACAATATCTCAACAAAGAGTTAACGAAAAAGGGAAAGGAAAACTCCATATGGAACACATaGAGGATGGTGCGAGCAGCA +
Preference number: 2 (lower is better)
Translates to: MAYEQYLNKELTKKGKENSIWNT*RMVRAA
Trigger: TGCTGCTCGCACCATCCTGCATGTGTTCCATATGGA...GTTTTCCTTTCCCTTTTTCGTTAACTCTTTGTTGAGATATTGTTCGTATGCCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000319921.4
3UTR-3UTR GCA 90 bp TTTTTCCAGCTGGAAACGGGATTCGTAATGGTAATGGTTGAACTTAATGAACGTCTAGATATTCATACATaGGAGAGCACACTGAGACTG +
Preference number: 2 (lower is better)
Translates to: FFQLETGFVMVMVELNERLDIHT*ESTLRL
Trigger: CAGTCTCAGTGTGCTCTCGCATGTATGAATATCTAG...ACGTTCATTAAGTTCAACCATTACCATTACGAATCCCGTTTCCAGCTGGAAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000582970.5
3UTR CAA 90 bp TTTCTTCCCAATATTTATCACTGGAAGTTTGTTTCTAAATTGGAATaGCCTGAACATACAGGAGTAACTGAAATAGCTCAGGGCCGTCTC +
Preference number: 2 (lower is better)
Translates to: FLPNIYHWKFVSKLE*PEHTGVTEIAQGRL
Trigger: GAGACGGCCCTGAGCTATTTCAGTTACTCCTGTATGTTCAGGCAATTCCAATTTAGAAACAAACTTCCAGTGATAAATATTGGGAAGAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582970.5
3UTR-3UTR TCA 90 bp GTCTCTTCTAAAAATACAAAAGGAACCGAGTGTGGCGGCACATTGTTCTTTAAACCAAAAGGCCACATATaGTATGATTCCATTCATATG +
Preference number: 2 (lower is better)
Translates to: VSSKNTKGTECGGTLFFKPKGHI*YDSIHM
Trigger: CATATGAATGGAATCATATCATATGTGGCCTTTTGG...TTTAAAGAACAATGTGCCGCCACACTCGGTTCCTTTTGTATTTTTAGAAGAGAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000319921.4
3UTR GCA 72 bp CCCCCGGCCCCCACACCCGTTCATAGGCAGTCGGAATaGAGATCTCGGTGGCAGGTGGCTCTGCACAGTCCA +
Preference number: 3 (lower is better)
Translates to: PPAPTPVHRQSE*RSRWQVALHSP
Trigger: TGGACTGTGCAGAGCCACCTGCCACCGAGATCTGCATTCCGACTGCCTATGAACGGGTGTGGGGGCCGGGGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
3UTR CCA 72 bp GCAGGGCAGCCGTGGCCAGCAGGGAGCTTCCTCATGTaGCATTGCCTGCGAGACTGTTCCTGGGAGACAGGG +
Preference number: 3 (lower is better)
Translates to: AGQPWPAGSFLM*HCLRDCSWETG
Trigger: CCCTGTCTCCCAGGAACAGTCTCGCAGGCAATGCCACATGAGGAAGCTCCCTGCTGGCCACGGCTGCCCTGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319921.4
3UTR CCA 72 bp GAGAGCGCTCTCAGGATCCATGTCGCTCAAGCTGGCTaGAGTCCTCCACAGGGATGCTCCACAGGGCAGGCC +
Preference number: 3 (lower is better)
Translates to: ESALRIHVAQAG*SPPQGCSTGQA
Trigger: GGCCTGCCCTGTGGAGCATCCCTGTGGAGGACTCCAGCCAGCTTGAGCGACATGGATCCTGAGAGCGCTCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582970.5
3UTR GCA 72 bp ACGGAGCACAGTTCCTTCCGTGCCTCCTGCCGGCGCTaGTCAAGGTGTGCATGGCTGAGTCCTGGACAAGCA +
Preference number: 3 (lower is better)
Translates to: TEHSSFRASCRR*SRCAWLSPGQA
Trigger: TGCTTGTCCAGGACTCAGCCATGCACACCTTGAGCAGCGCCGGCAGGAGGCACGGAAGGAACTGTGCTCCGT
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
3UTR GCA 72 bp GTGAGGAGAACGGAGCACAGTTCCTTCCGTGCCTCCTaGCGGCGCTGCTCAAGGTGTGCATGGCTGAGTCCT +
Preference number: 3 (lower is better)
Translates to: VRRTEHSSFRAS*RRCSRCAWLSP
Trigger: AGGACTCAGCCATGCACACCTTGAGCAGCGCCGGCAGGAGGCACGGAAGGAACTGTGCTCCGTTCTCCTCAC
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
3UTR CCA 72 bp GGGCCTGCTACACACTGCTCTGGCCAGGCATTCCACTaGGGCAATTGCCTGCCTGAGAGCGCTCTCAGGATC +
Preference number: 3 (lower is better)
Translates to: GPATHCSGQAFH*GNCLPESALRI
Trigger: GATCCTGAGAGCGCTCTCAGGCAGGCAATTGCCCCAGTGGAATGCCTGGCCAGAGCAGTGTGTAGCAGGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582970.5
3UTR TCA 72 bp CTCTGGCCAGGCATTCCACTGGGGCAATTGCCTGCCTaGGAGCGCTCTCAGGATCCATGTCGCTCAAGCTGG +
Preference number: 3 (lower is better)
Translates to: LWPGIPLGQLPA*ERSQDPCRSSW
Trigger: CCAGCTTGAGCGACATGGATCCTGAGAGCGCTCTCAGGCAGGCAATTGCCCCAGTGGAATGCCTGGCCAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582970.5
3UTR GCA 72 bp CATGACAGTGAGGAGAACGGAGCACAGTTCCTTCCGTaGCTCCTGCCGGCGCTGCTCAAGGTGTGCATGGCT +
Preference number: 3 (lower is better)
Translates to: HDSEENGAQFLP*LLPALLKVCMA
Trigger: AGCCATGCACACCTTGAGCAGCGCCGGCAGGAGGCACGGAAGGAACTGTGCTCCGTTCTCCTCACTGTCATG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
3UTR CCA 72 bp GGGAGAGCCAGGACCCACATTCAGGCCTGTCTGGGCTaGGCTGTGTGTCAGCTTTGTTGGGTTCCAGAGTGG +
Preference number: 3 (lower is better)
Translates to: GRARTHIQACLG*AVCQLCWVPEW
Trigger: CCACTCTGGAACCCAACAAAGCTGACACACAGCCCAGCCCAGACAGGCCTGAATGTGGGTCCTGGCTCTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582970.5
3UTR TCA 72 bp CAAGCCCGTGTGACTTGTGCCACACGCGCACGGCCGTaGTTCCATATGGAACACATGCAGGATGGTGCGAGC +
Preference number: 3 (lower is better)
Translates to: QARVTCATRARP*FHMEHMQDGAS
Trigger: GCTCGCACCATCCTGCATGTGTTCCATATGGAATCACGGCCGTGCGCGTGTGGCACAAGTCACACGGGCTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319921.4
3UTR GCA 72 bp CCATCTGAGGAACGGCCTGCAAGCCCGTGTGACTTGTaGCACACGCGCACGGCCGTGATTCCATATGGAACA +
Preference number: 3 (lower is better)
Translates to: PSEERPASPCDL*HTRTAVIPYGT
Trigger: TGTTCCATATGGAATCACGGCCGTGCGCGTGTGGCACAAGTCACACGGGCTTGCAGGCCGTTCCTCAGATGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319921.4
3UTR GCA 72 bp ACTGCTCTGGCCAGGCATTCCACTGGGGCAATTGCCTaGCTGAGAGCGCTCTCAGGATCCATGTCGCTCAAG +
Preference number: 3 (lower is better)
Translates to: TALARHSTGAIA*LRALSGSMSLK
Trigger: CTTGAGCGACATGGATCCTGAGAGCGCTCTCAGGCAGGCAATTGCCCCAGTGGAATGCCTGGCCAGAGCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582970.5
3UTR GCA 72 bp ACACACTGCTCTGGCCAGGCATTCCACTGGGGCAATTaGCTGCCTGAGAGCGCTCTCAGGATCCATGTCGCT +
Preference number: 3 (lower is better)
Translates to: THCSGQAFHWGN*LPESALRIHVA
Trigger: AGCGACATGGATCCTGAGAGCGCTCTCAGGCAGGCAATTGCCCCAGTGGAATGCCTGGCCAGAGCAGTGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582970.5
3UTR GCA 72 bp TGCTGGTCTTTCCTTGCCTCTGCCAGCCACTTATGCTaGTGTTCTCTCAACCACTGTTGGGGCGGGCGGGTG +
Preference number: 3 (lower is better)
Translates to: CWSFLASASHLC*CSLNHCWGGRV
Trigger: CACCCGCCCGCCCCAACAGTGGTTGAGAGAACAGCAGCATAAGTGGCTGGCAGAGGCAAGGAAAGACCAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582970.5
3UTR CCA 72 bp CGCACGGCCGTGATTCCATATGGAACACATGCAGGATaGTGCGAGCAGCAGGGACTGTGCAGCACACTGAGG +
Preference number: 3 (lower is better)
Translates to: RTAVIPYGTHAG*CEQQGLCSTLR
Trigger: CCTCAGTGTGCTGCACAGTCCCTGCTGCTCGCACCATCCTGCATGTGTTCCATATGGAATCACGGCCGTGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319921.4
3UTR CCA 72 bp GTCGAGCCACTTGCCCATGGCTGTAGAACTGGCAAATaGGAGAGCCAGGACCCACATTCAGGCCTGTCTGGG +
Preference number: 3 (lower is better)
Translates to: VEPLAHGCRTGK*ESQDPHSGLSG
Trigger: CCCAGACAGGCCTGAATGTGGGTCCTGGCTCTCCCATTTGCCAGTTCTACAGCCATGGGCAAGTGGCTCGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582970.5
3UTR CCA 72 bp CCTGCAGTCTGGGTCACTCTGCCCTTCATCAGACACTaGTGGCACCATGACAGTGAGGAGAACGGAGCACAG +
Preference number: 3 (lower is better)
Translates to: PAVWVTLPFIRH*WHHDSEENGAQ
Trigger: CTGTGCTCCGTTCTCCTCACTGTCATGGTGCCACCAGTGTCTGATGAAGGGCAGAGTGACCCAGACTGCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
3UTR CCA 72 bp CAGATCGGCTACAGGGAGTGGCGCTCAGCTCCACTGTaGAGTCGCCAGGATGCTGTCATTTTGTCCAGAGGA +
Preference number: 3 (lower is better)
Translates to: QIGYREWRSAPL*SRQDAVILSRG
Trigger: TCCTCTGGACAAAATGACAGCATCCTGGCGACTCCACAGTGGAGCTGAGCGCCACTCCCTGTAGCCGATCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582970.5
3UTR CCA 72 bp CAAATGGGAGAGCCAGGACCCACATTCAGGCCTGTCTaGGCTGGGCTGTGTGTCAGCTTTGTTGGGTTCCAG +
Preference number: 3 (lower is better)
Translates to: QMGEPGPTFRPV*AGLCVSFVGFQ
Trigger: CTGGAACCCAACAAAGCTGACACACAGCCCAGCCCAGACAGGCCTGAATGTGGGTCCTGGCTCTCCCATTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582970.5
3UTR CCA 72 bp GCCAGCCACTTATGCTGCTGTTCTCTCAACCACTGTTaGGGCGGGCGGGTGGGGAGTCTAAAACCAGCTGTA +
Preference number: 3 (lower is better)
Translates to: ASHLCCCSLNHC*GGRVGSLKPAV
Trigger: TACAGCTGGTTTTAGACTCCCCACCCGCCCGCCCCAACAGTGGTTGAGAGAACAGCAGCATAAGTGGCTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582970.5
3UTR GCA 72 bp GGAGTGGCGCTCAGCTCCACTGTGGAGTCGCCAGGATaGTGTCATTTTGTCCAGAGGAAAAGTCCACCGTCT +
Preference number: 3 (lower is better)
Translates to: GVALSSTVESPG*CHFVQRKSPPS
Trigger: AGACGGTGGACTTTTCCTCTGGACAAAATGACAGCATCCTGGCGACTCCACAGTGGAGCTGAGCGCCACTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582970.5
3UTR CCA 72 bp GCAGTCTGGGTCACTCTGCCCTTCATCAGACACTGGTaGCACCATGACAGTGAGGAGAACGGAGCACAGTTC +
Preference number: 3 (lower is better)
Translates to: AVWVTLPFIRHW*HHDSEENGAQF
Trigger: GAACTGTGCTCCGTTCTCCTCACTGTCATGGTGCCACCAGTGTCTGATGAAGGGCAGAGTGACCCAGACTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
3UTR TCA 72 bp GACAGCTCTCCTTCTGAATGCAAAGGCACCAGTCCATaGTCAAGTCCACGCCGCAGACGAGGAGAGAGGAGT +
Preference number: 3 (lower is better)
Translates to: DSSPSECKGTSP*SSPRRRRGERS
Trigger: ACTCCTCTCTCCTCGTCTGCGGCGTGGACTTGATCATGGACTGGTGCCTTTGCATTCAGAAGGAGAGCTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
3UTR CCA 72 bp GCAAAGATCGTGGGTTCTGAGGAAGTGGCTGTCCTCTaGGTTGAGGTTCTGTTGCGCTTCAGGGCACAGGTA +
Preference number: 3 (lower is better)
Translates to: AKIVGSEEVAVL*VEVLLRFRAQV
Trigger: TACCTGTGCCCTGAAGCGCAACAGAACCTCAACCCAGAGGACAGCCACTTCCTCAGAACCCACGATCTTTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582970.5
3UTR GCA 72 bp TTCCTTCCGTGCCTCCTGCCGGCGCTGCTCAAGGTGTaGATGGCTGAGTCCTGGACAAGCATTTTGTATTTT +
Preference number: 3 (lower is better)
Translates to: FLPCLLPALLKV*MAESWTSILYF
Trigger: AAAATACAAAATGCTTGTCCAGGACTCAGCCATGCACACCTTGAGCAGCGCCGGCAGGAGGCACGGAAGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
3UTR GCA 72 bp GTGAAGTTAGTTAGCTCCTACCTGTACCCCGTTAGCTaGAGCCCCGCTGTGTCCAGTGAAGTCATTTCAGGC +
Preference number: 3 (lower is better)
Translates to: VKLVSSYLYPVS*SPAVSSEVISG
Trigger: GCCTGAAATGACTTCACTGGACACAGCGGGGCTGCAGCTAACGGGGTACAGGTAGGAGCTAACTAACTTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582970.5
3UTR CCA 72 bp GTCAGGCGTCGATCTTTAACTACCAGGCCCAGGGTGTaGTGCAGGCTGTCTGCTTGTGGATTTCATTTCTGC +
Preference number: 3 (lower is better)
Translates to: VRRRSLTTRPRV*CRLSACGFHFC
Trigger: GCAGAAATGAAATCCACAAGCAGACAGCCTGCACCACACCCTGGGCCTGGTAGTTAAAGATCGACGCCTGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582970.5
3UTR GCA 72 bp CTAAATGCCAGGGACTGTGTGAAGTCAGTTACTGCCTaGAGTCTGGGTCACTCTGCCCTTCATCAGACACTG +
Preference number: 3 (lower is better)
Translates to: LNARDCVKSVTA*SLGHSALHQTL
Trigger: CAGTGTCTGATGAAGGGCAGAGTGACCCAGACTGCAGGCAGTAACTGACTTCACACAGTCCCTGGCATTTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
3UTR CCA 72 bp TTCCGTGCCTCCTGCCGGCGCTGCTCAAGGTGTGCATaGCTGAGTCCTGGACAAGCATTTTGTATTTTTGTA +
Preference number: 3 (lower is better)
Translates to: FRASCRRCSRCA*LSPGQAFCIFV
Trigger: TACAAAAATACAAAATGCTTGTCCAGGACTCAGCCATGCACACCTTGAGCAGCGCCGGCAGGAGGCACGGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
3UTR-3UTR CAA 90 bp GTCTCTTCTAAAAATACAAAAGGAACCGAGTGTGGCGGCACATTGTTCTTTAAAGCAAGCCCGTGTGACTaGTGCCACACGCGCACGGCC +
Preference number: 3 (lower is better)
Translates to: VSSKNTKGTECGGTLFFKASPCD*CHTRTA
Trigger: GGCCGTGCGCGTGTGGCACAAGTCACACGGGCTTGC...TTTAAAGAACAATGTGCCGCCACACTCGGTTCCTTTTGTATTTTTAGAAGAGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000319921.4
3UTR TCA 72 bp CAAAAAGCTGTCAGCTCAGGTAGCACGCCTTGGTCTTaGATTCGGTGCTACGCTGACAGCTCTCCTTCTGAA +
Preference number: 3 (lower is better)
Translates to: QKAVSSGSTPWS*IRCYADSSPSE
Trigger: TTCAGAAGGAGAGCTGTCAGCGTAGCACCGAATTCAAGACCAAGGCGTGCTACCTGAGCTGACAGCTTTTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
3UTR TCA 72 bp AGGCGAACGGGCACAGGTCATTACTGCGTGTGTGGCTaGGCTACAAGTCTCCTGGAATGTAAACAATGTTGG +
Preference number: 3 (lower is better)
Translates to: RRTGTGHYCVCG*ATSLLECKQCW
Trigger: CCAACATTGTTTACATTCCAGGAGACTTGTAGCTCAGCCACACACGCAGTAATGACCTGTGCCCGTTCGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
3UTR TCA 72 bp GCAAGACTCATGTCTCCAACAACTGAGCTCCCCGAGTaGGCAATTCCTGTCCCTTTTAAGGGCTCACAACTC +
Preference number: 3 (lower is better)
Translates to: ARLMSPTTELPE*AIPVPFKGSQL
Trigger: GAGTTGTGAGCCCTTAAAAGGGACAGGAATTGCTCACTCGGGGAGCTCAGTTGTTGGAGACATGAGTCTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582970.5
3UTR GCA 72 bp ATGACTAAATGCCAGGGACTGTGTGAAGTCAGTTACTaGCTGCAGTCTGGGTCACTCTGCCCTTCATCAGAC +
Preference number: 3 (lower is better)
Translates to: MTKCQGLCEVSY*LQSGSLCPSSD
Trigger: GTCTGATGAAGGGCAGAGTGACCCAGACTGCAGGCAGTAACTGACTTCACACAGTCCCTGGCATTTAGTCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
3UTR GCA 72 bp TCAGAGGTGTTTTCCTTCAGCACACTAGTGCCTGTGTaGATGGCTAGACTTGGGTGGCTTTACCTACTTGGC +
Preference number: 3 (lower is better)
Translates to: SEVFSFSTLVPV*MARLGWLYLLG
Trigger: GCCAAGTAGGTAAAGCCACCCAAGTCTAGCCATGCACACAGGCACTAGTGTGCTGAAGGAAAACACCTCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582970.5
3UTR CCA 72 bp GAATTCAATGACCTCAATGTTTCTGGACTTCCCCTGTaGCCGCAAGGCTGTGCTTGTACAGGGGTTAAGTGT +
Preference number: 3 (lower is better)
Translates to: EFNDLNVSGLPL*PQGCACTGVKC
Trigger: ACACTTAACCCCTGTACAAGCACAGCCTTGCGGCCACAGGGGAAGTCCAGAAACATTGAGGTCATTGAATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319921.4
3UTR CCA 72 bp AGTTCCAAAGACCAGTCTTACCAAGTTTCAGATGTCTaGACTCCAAGTGGCAGTTCCTTCCCGGTGTTCAGC +
Preference number: 3 (lower is better)
Translates to: SSKDQSYQVSDV*TPSGSSFPVFS
Trigger: GCTGAACACCGGGAAGGAACTGCCACTTGGAGTCCAGACATCTGAAACTTGGTAAGACTGGTCTTTGGAACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582970.5
3UTR GCA 72 bp AGAAGCAGTTGTTTATGTTCAGCAATTGTTTATGCCTaGAGAGGGGAGTGGGTGACTAGAGGGGAGGAGGAT +
Preference number: 3 (lower is better)
Translates to: RSSCLCSAIVYA*RGEWVTRGEED
Trigger: ATCCTCCTCCCCTCTAGTCACCCACTCCCCTCTGCAGGCATAAACAATTGCTGAACATAAACAACTGCTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319921.4
3UTR GCA 72 bp CGAGGCTCAGGTTTTCTCCAGCCACCTCCCCAGTTATaGAACCTTCACACTTTATGTATCAAATCAGAGGTG +
Preference number: 3 (lower is better)
Translates to: RGSGFLQPPPQL*NLHTLCIKSEV
Trigger: CACCTCTGATTTGATACATAAAGTGTGAAGGTTGCATAACTGGGGAGGTGGCTGGAGAAAACCTGAGCCTCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582970.5
3UTR TCA 72 bp AATCTTTGGCGATTAATCCACTCTCCATTTTATGCGTaGGAAAACCAAGGCCCTGATGGTGTCCCTGGTCCA +
Preference number: 3 (lower is better)
Translates to: NLWRLIHSPFYA*ENQGPDGVPGP
Trigger: TGGACCAGGGACACCATCAGGGCCTTGGTTTTCTCACGCATAAAATGGAGAGTGGATTAATCGCCAAAGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
3UTR TCA 72 bp TCCACAAAGAACACAAACGATTCCCAAAAGCCTAGCTaGTGTCTATGTGCCATAAATAGAAGCTCTGCCCCC +
Preference number: 3 (lower is better)
Translates to: STKNTNDSQKPS*CLCAINRSSAP
Trigger: GGGGGCAGAGCTTCTATTTATGGCACATAGACATCAGCTAGGCTTTTGGGAATCGTTTGTGTTCTTTGTGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582970.5
3UTR GCA 72 bp TTCCTAGTGGGGTGGTCTTACTTTGTGCTTGACCCATaGTTCTTCAAGACAAAACATTACGCTCACCCTACA +
Preference number: 3 (lower is better)
Translates to: FLVGWSYFVLDP*FFKTKHYAHPT
Trigger: TGTAGGGTGAGCGTAATGTTTTGTCTTGAAGAAGCATGGGTCAAGCACAAAGTAAGACCACCCCACTAGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582970.5
3UTR TCA 72 bp AGCATAGTTCCTAGTGGGGTGGTCTTACTTTGTGCTTaGCCCATGCTTCTTCAAGACAAAACATTACGCTCA +
Preference number: 3 (lower is better)
Translates to: SIVPSGVVLLCA*PMLLQDKTLRS
Trigger: TGAGCGTAATGTTTTGTCTTGAAGAAGCATGGGTCAAGCACAAAGTAAGACCACCCCACTAGGAACTATGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582970.5
3UTR-3UTR CAA 90 bp TGCTGGCCAGTCTATCTTACACAAAGTTTTAAGTTTTCCTGGTGTCATAGTACTTGTGCATGGCTAGACTaGGGTGGCTTTACCTACTTG +
Preference number: 3 (lower is better)
Translates to: CWPVYLTQSFKFSWCHSTCAWLD*GGFTYL
Trigger: CAAGTAGGTAAAGCCACCCAAGTCTAGCCATGCACA...AGTACTATGACACCAGGAAAACTTAAAACTTTGTGTAAGATAGACTGGCCAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582970.5
3UTR-3UTR CAA 90 bp TGCTGGCCAGTCTATCTTACACAAAGTTTTAAGTTTTCCTGGTGTCATAGTACTAGGGTGAAGGAGCCCTaGGATTTGGTAATTAGGAGT +
Preference number: 3 (lower is better)
Translates to: CWPVYLTQSFKFSWCHSTRVKEP*DLVIRS
Trigger: ACTCCTAATTACCAAATCCAAGGGCTCCTTCACCCT...AGTACTATGACACCAGGAAAACTTAAAACTTTGTGTAAGATAGACTGGCCAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582970.5
3UTR TCA 72 bp ACCCAAAAGGCCACATATGATATGATTCCATTCATATaGCAGTCAGAACAGAGAAAGCCACAGAAGCAGTTG +
Preference number: 3 (lower is better)
Translates to: TQKATYDMIPFI*QSEQRKPQKQL
Trigger: CAACTGCTTCTGTGGCTTTCTCTGTTCTGACTGTCATATGAATGGAATCATATCATATGTGGCCTTTTGGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319921.4
CDS-3UTR GCA 90 bp TCAGCAAGCCAGCCCCCGGCCCCCACACCCGTTCATAGGCAGTCGGAATGCAGAGTGGCGTGGTGGCTGTaGCTGGGGGCTGGCTCGGCT +
Preference number: 4 (lower is better)
Translates to: SASQPPAPTPVHRQSECRVAWWL*LGAGSA
Trigger: AGCCGAGCCAGCCCCCAGGCACAGCCACCACGCCAC...TCTGCATTCCGACTGCCTATGAACGGGTGTGGGGGCCGGGGGCTGGCTTGCTGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp TCAGCAAGCCAGCCCCCGGCCCCCACACCCGTTCATAGGCAGTCGGAATGCAGAAGGTCCTTCCCCTGCTaGAAGCGGGCGCACTGCCGG +
Preference number: 4 (lower is better)
Translates to: SASQPPAPTPVHRQSECRRSFPC*KRAHCR
Trigger: CCGGCAGTGCGCCCGCTTTCAGCAGGGGAAGGACCT...TCTGCATTCCGACTGCCTATGAACGGGTGTGGGGGCCGGGGGCTGGCTTGCTGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp GGGCAGCCGTGGCCAGCAGGGAGCTTCCTCATGTGGCATTGCCTGCGAGACTGTGGCTCGGCTGGCCAGTaGGGCCACTCTGCTGGGCTT +
Preference number: 4 (lower is better)
Translates to: GQPWPAGSFLMWHCLRDCGSAGQ*GHSAGL
Trigger: AAGCCCAGCAGAGTGGCCCCACTGGCCAGCCGAGCC...ACAGTCTCGCAGGCAATGCCACATGAGGAAGCTCCCTGCTGGCCACGGCTGCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319921.4
CDS-3UTR CCA 90 bp GGGGTGGGCAGTGCCAGAGGCGAACGGGCACAGGTCATTACTGCGTGTGTGGCTCACCCTCCAGTGGCGTaGTGGCTGTGCCTGGGGGCT +
Preference number: 4 (lower is better)
Translates to: GVGSARGERAQVITACVAHPPVA*WLCLGA
Trigger: AGCCCCCAGGCACAGCCACCACGCCACTGGAGGGTG...AGCCACACACGCAGTAATGACCTGTGCCCGTTCGCCTCTGGCACTGCCCACCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp AGCTCCGAGTGCAAGTTGAAGACTTCAGCAAGCCAGCCCCCGGCCCCCACACCCTCCCCCGCTGGCTGCTaGGCTTCCGCACCAGGTACA +
Preference number: 4 (lower is better)
Translates to: SSECKLKTSASQPPAPTPSPAGC*ASAPGT
Trigger: TGTACCTGGTGCGGAAGCTCAGCAGCCAGCGGGGGA...GGGTGTGGGGGCCGGGGGCTGGCTTGCTGAAGTCTTCAACTTGCACTCGGAGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp TCAGCAAGCCAGCCCCCGGCCCCCACACCCGTTCATAGGCAGTCGGAATGCAGAAGGCAAACCAGGCCCTaGGGCAGCGCAGGCAGTGCA +
Preference number: 4 (lower is better)
Translates to: SASQPPAPTPVHRQSECRRQTRP*GSAGSA
Trigger: TGCACTGCCTGCGCTGCCTCAGGGCCTGGTTTGCCT...TCTGCATTCCGACTGCCTATGAACGGGTGTGGGGGCCGGGGGCTGGCTTGCTGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp AGCTCCGAGTGCAAGTTGAAGACTTCAGCAAGCCAGCCCCCGGCCCCCACACCCAGGCAAACCAGGCCCTaGGGCAGCGCAGGCAGTGCA +
Preference number: 4 (lower is better)
Translates to: SSECKLKTSASQPPAPTPRQTRP*GSAGSA
Trigger: TGCACTGCCTGCGCTGCCTCAGGGCCTGGTTTGCCT...GGGTGTGGGGGCCGGGGGCTGGCTTGCTGAAGTCTTCAACTTGCACTCGGAGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp GGGGTGGGCAGTGCCAGAGGCGAACGGGCACAGGTCATTACTGCGTGTGTGGCTGGCTTGGAGAGGCCCTaGACGAACTCCATCCCCCGC +
Preference number: 4 (lower is better)
Translates to: GVGSARGERAQVITACVAGLERP*TNSIPR
Trigger: GCGGGGGATGGAGTTCGTGCAGGGCCTCTCCAAGCC...AGCCACACACGCAGTAATGACCTGTGCCCGTTCGCCTCTGGCACTGCCCACCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp GGGGTGGGCAGTGCCAGAGGCGAACGGGCACAGGTCATTACTGCGTGTGTGGCTGTGGCGCTCCAGGTCTaGCGTGTGCAGGTGTGCCTG +
Preference number: 4 (lower is better)
Translates to: GVGSARGERAQVITACVAVALQV*RVQVCL
Trigger: CAGGCACACCTGCACACGGCAGACCTGGAGCGCCAC...AGCCACACACGCAGTAATGACCTGTGCCCGTTCGCCTCTGGCACTGCCCACCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp GGAGAACGGAGCACAGTTCCTTCCGTGCCTCCTGCCGGCGCTGCTCAAGGTGTGGGGCCAGGCTCCCGCTaGCTTGCATGTGCTCATCGG +
Preference number: 4 (lower is better)
Translates to: GERSTVPSVPPAGAAQGVGPGSR*LACAHR
Trigger: CCGATGAGCACATGCAAGGCAGCGGGAGCCTGGCCC...CACACCTTGAGCAGCGCCGGCAGGAGGCACGGAAGGAACTGTGCTCCGTTCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp TCAGCAAGCCAGCCCCCGGCCCCCACACCCGTTCATAGGCAGTCGGAATGCAGAAGCCGGGGCTTGCCCTaGAGGAAGCGGCTGACGATC +
Preference number: 4 (lower is better)
Translates to: SASQPPAPTPVHRQSECRSRGLP*RKRLTI
Trigger: GATCGTCAGCCGCTTCCTCCAGGGCAAGCCCCGGCT...TCTGCATTCCGACTGCCTATGAACGGGTGTGGGGGCCGGGGGCTGGCTTGCTGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp CGGGGGCCTGCTACACACTGCTCTGGCCAGGCATTCCACTGGGGCAATTGCCTGAGCCGGGGCTTGCCCTaGAGGAAGCGGCTGACGATC +
Preference number: 4 (lower is better)
Translates to: RGPATHCSGQAFHWGNCLSRGLP*RKRLTI
Trigger: GATCGTCAGCCGCTTCCTCCAGGGCAAGCCCCGGCT...CAGGCAATTGCCCCAGTGGAATGCCTGGCCAGAGCAGTGTGTAGCAGGCCCCCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR CCA 90 bp AGCTCCGAGTGCAAGTTGAAGACTTCAGCAAGCCAGCCCCCGGCCCCCACACCCCCAGGTAGGCTTGGATaGCCTCGAGGGGTGCCTGGG +
Preference number: 4 (lower is better)
Translates to: SSECKLKTSASQPPAPTPPGRLG*PRGVPG
Trigger: CCCAGGCACCCCTCGAGGCCATCCAAGCCTACCTGG...GGGTGTGGGGGCCGGGGGCTGGCTTGCTGAAGTCTTCAACTTGCACTCGGAGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp TCAGCAAGCCAGCCCCCGGCCCCCACACCCGTTCATAGGCAGTCGGAATGCAGATCGGGGTCGGTGGCCTaGGGGATCCCTAAGGTCAGG +
Preference number: 4 (lower is better)
Translates to: SASQPPAPTPVHRQSECRSGSVA*GIPKVR
Trigger: CCTGACCTTAGGGATCCCCCAGGCCACCGACCCCGA...TCTGCATTCCGACTGCCTATGAACGGGTGTGGGGGCCGGGGGCTGGCTTGCTGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp GGAGAACGGAGCACAGTTCCTTCCGTGCCTCCTGCCGGCGCTGCTCAAGGTGTGCGCAGGCAGTGCACGTaGTCGCAGGGCAGACAGACG +
Preference number: 4 (lower is better)
Translates to: GERSTVPSVPPAGAAQGVRRQCT*SQGRQT
Trigger: CGTCTGTCTGCCCTGCGACCACGTGCACTGCCTGCG...CACACCTTGAGCAGCGCCGGCAGGAGGCACGGAAGGAACTGTGCTCCGTTCTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp TCAGCAAGCCAGCCCCCGGCCCCCACACCCGTTCATAGGCAGTCGGAATGCAGACACACAGCCGGTCATTaGACACGGCTGCCGCCGACA +
Preference number: 4 (lower is better)
Translates to: SASQPPAPTPVHRQSECRHTAGH*TRLPPT
Trigger: TGTCGGCGGCAGCCGTGTTCAATGACCGGCTGTGTG...TCTGCATTCCGACTGCCTATGAACGGGTGTGGGGGCCGGGGGCTGGCTTGCTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp GGAGAACGGAGCACAGTTCCTTCCGTGCCTCCTGCCGGCGCTGCTCAAGGTGTGGGGGCTGACTTCCTCTaGGCACTTGGCCTCGGGCAA +
Preference number: 4 (lower is better)
Translates to: GERSTVPSVPPAGAAQGVGADFL*ALGLGQ
Trigger: TTGCCCGAGGCCAAGTGCTCAGAGGAAGTCAGCCCC...CACACCTTGAGCAGCGCCGGCAGGAGGCACGGAAGGAACTGTGCTCCGTTCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp GGAGAACGGAGCACAGTTCCTTCCGTGCCTCCTGCCGGCGCTGCTCAAGGTGTGCTCCAGGCATCCTTGTaGCGCGGGGCCAGCTCCATA +
Preference number: 4 (lower is better)
Translates to: GERSTVPSVPPAGAAQGVLQASL*RGASSI
Trigger: TATGGAGCTGGCCCCGCGGCACAAGGATGCCTGGAG...CACACCTTGAGCAGCGCCGGCAGGAGGCACGGAAGGAACTGTGCTCCGTTCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp TCAGCAAGCCAGCCCCCGGCCCCCACACCCGTTCATAGGCAGTCGGAATGCAGAAAGAGGGGTGGGCAGTaGCAGAGGCGAACGGGCACA +
Preference number: 4 (lower is better)
Translates to: SASQPPAPTPVHRQSECRKRGGQ*QRRTGT
Trigger: TGTGCCCGTTCGCCTCTGGCACTGCCCACCCCTCTT...TCTGCATTCCGACTGCCTATGAACGGGTGTGGGGGCCGGGGGCTGGCTTGCTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp GGAGAACGGAGCACAGTTCCTTCCGTGCCTCCTGCCGGCGCTGCTCAAGGTGTGCTCACTCAGCGGCTCTaGGGCTTCCCGCCAGAAGAG +
Preference number: 4 (lower is better)
Translates to: GERSTVPSVPPAGAAQGVLTQRL*GFPPEE
Trigger: CTCTTCTGGCGGGAAGCCGCAGAGCCGCTGAGTGAG...CACACCTTGAGCAGCGCCGGCAGGAGGCACGGAAGGAACTGTGCTCCGTTCTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp GGAGAACGGAGCACAGTTCCTTCCGTGCCTCCTGCCGGCGCTGCTCAAGGTGTGCTCCTCCGCTTGGCGTaGCACCTCGTAGCTCAGCTG +
Preference number: 4 (lower is better)
Translates to: GERSTVPSVPPAGAAQGVLLRLA*HLVAQL
Trigger: CAGCTGAGCTACGAGGTGGCACGCCAAGCGGAGGAG...CACACCTTGAGCAGCGCCGGCAGGAGGCACGGAAGGAACTGTGCTCCGTTCTCC
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp GGAGAACGGAGCACAGTTCCTTCCGTGCCTCCTGCCGGCGCTGCTCAAGGTGTGGCCCTGCATGGCGTCTaGCACGATGGTCTTGGCGAG +
Preference number: 4 (lower is better)
Translates to: GERSTVPSVPPAGAAQGVALHGV*HDGLGE
Trigger: CTCGCCAAGACCATCGTGGCAGACGCCATGCAGGGC...CACACCTTGAGCAGCGCCGGCAGGAGGCACGGAAGGAACTGTGCTCCGTTCTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp GGAGAACGGAGCACAGTTCCTTCCGTGCCTCCTGCCGGCGCTGCTCAAGGTGTGCGCTTCCAGAGGGTGTaGCTGAATGTGCCCGCCTCC +
Preference number: 4 (lower is better)
Translates to: GERSTVPSVPPAGAAQGVRFQRV*LNVPAS
Trigger: GGAGGCGGGCACATTCAGGCACACCCTCTGGAAGCG...CACACCTTGAGCAGCGCCGGCAGGAGGCACGGAAGGAACTGTGCTCCGTTCTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp ACAGTGATGACAGGGCCATCTGAGGAACGGCCTGCAAGCCCGTGTGACTTGTGCGGACCGGTCCCCTCCTaGGACAGGCCTCTGCCCCCA +
Preference number: 4 (lower is better)
Translates to: TVMTGPSEERPASPCDLCGPVPS*DRPLPP
Trigger: TGGGGGCAGAGGCCTGTCCCAGGAGGGGACCGGTCC...GCACAAGTCACACGGGCTTGCAGGCCGTTCCTCAGATGGCCCTGTCATCACTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000319921.4
CDS-3UTR TCA 90 bp TCAGCAAGCCAGCCCCCGGCCCCCACACCCGTTCATAGGCAGTCGGAATGCAGAAGGTGCTGTCCAGCATaGGCGCAGCGGCAATCTGCT +
Preference number: 4 (lower is better)
Translates to: SASQPPAPTPVHRQSECRRCCPA*AQRQSA
Trigger: AGCAGATTGCCGCTGCGCTCATGCTGGACAGCACCT...TCTGCATTCCGACTGCCTATGAACGGGTGTGGGGGCCGGGGGCTGGCTTGCTGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp GGAGAACGGAGCACAGTTCCTTCCGTGCCTCCTGCCGGCGCTGCTCAAGGTGTGGGCAGTGGCTCACTGTaGGGGGAGAGGGTCAGATCT +
Preference number: 4 (lower is better)
Translates to: GERSTVPSVPPAGAAQGVGSGSL*GERVRS
Trigger: AGATCTGACCCTCTCCCCTCACAGTGAGCCACTGCC...CACACCTTGAGCAGCGCCGGCAGGAGGCACGGAAGGAACTGTGCTCCGTTCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp AGCTCCGAGTGCAAGTTGAAGACTTCAGCAAGCCAGCCCCCGGCCCCCACACCCGCTCCTCGACGGCACTaGCGTCCTCCTTTCCAGGAT +
Preference number: 4 (lower is better)
Translates to: SSECKLKTSASQPPAPTPAPRRH*RPPFQD
Trigger: ATCCTGGAAAGGAGGACGTCAGTGCCGTCGAGGAGC...GGGTGTGGGGGCCGGGGGCTGGCTTGCTGAAGTCTTCAACTTGCACTCGGAGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp CGGGGGCCTGCTACACACTGCTCTGGCCAGGCATTCCACTGGGGCAATTGCCTGAGGCGGAAGTTGGGGTaGACCCGACATTTGACGCGG +
Preference number: 4 (lower is better)
Translates to: RGPATHCSGQAFHWGNCLRRKLG*TRHLTR
Trigger: CCGCGTCAAATGTCGGGTTCACCCCAACTTCCGCCT...CAGGCAATTGCCCCAGTGGAATGCCTGGCCAGAGCAGTGTGTAGCAGGCCCCCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR TCA 90 bp AGCTCCGAGTGCAAGTTGAAGACTTCAGCAAGCCAGCCCCCGGCCCCCACACCCTCTCGTTCTGGTCTCTaGGCATGCCCACGGCGCTCT +
Preference number: 4 (lower is better)
Translates to: SSECKLKTSASQPPAPTPSRSGL*ACPRRS
Trigger: AGAGCGCCGTGGGCATGCTCAGAGACCAGAACGAGA...GGGTGTGGGGGCCGGGGGCTGGCTTGCTGAAGTCTTCAACTTGCACTCGGAGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp CTGGACTTCCCCTGTGGCCGCAAGGCTGTGCTTGTACAGGGGTTAAGTGTCCAAGTGGCGTGGTGGCTGTaGCTGGGGGCTGGCTCGGCT +
Preference number: 4 (lower is better)
Translates to: LDFPCGRKAVLVQGLSVQVAWWL*LGAGSA
Trigger: AGCCGAGCCAGCCCCCAGGCACAGCCACCACGCCAC...TTGGACACTTAACCCCTGTACAAGCACAGCCTTGCGGCCACAGGGGAAGTCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000319921.4
CDS-3UTR GCA 90 bp GGGCAGCCGTGGCCAGCAGGGAGCTTCCTCATGTGGCATTGCCTGCGAGACTGTGAGGCCCCTGCCTGTTaGTCGGTGGTCTGCAGTTCT +
Preference number: 4 (lower is better)
Translates to: GQPWPAGSFLMWHCLRDCEAPAC*SVVCSS
Trigger: AGAACTGCAGACCACCGAGCAACAGGCAGGGGCCTC...ACAGTCTCGCAGGCAATGCCACATGAGGAAGCTCCCTGCTGGCCACGGCTGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319921.4
CDS-3UTR GCA 90 bp AGCTCCGAGTGCAAGTTGAAGACTTCAGCAAGCCAGCCCCCGGCCCCCACACCCAGCGCAGCGGCAATCTaGTTCCCCTTCACCAGGTCC +
Preference number: 4 (lower is better)
Translates to: SSECKLKTSASQPPAPTPSAAAI*FPFTRS
Trigger: GGACCTGGTGAAGGGGAAGCAGATTGCCGCTGCGCT...GGGTGTGGGGGCCGGGGGCTGGCTTGCTGAAGTCTTCAACTTGCACTCGGAGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp GGAGAACGGAGCACAGTTCCTTCCGTGCCTCCTGCCGGCGCTGCTCAAGGTGTGTCCTGCCGCAGCCCCTaGTGCTTGACAACGTCCTTG +
Preference number: 4 (lower is better)
Translates to: GERSTVPSVPPAGAAQGVSCRSP*CLTTSL
Trigger: CAAGGACGTTGTCAAGCAGCAGGGGCTGCGGCAGGA...CACACCTTGAGCAGCGCCGGCAGGAGGCACGGAAGGAACTGTGCTCCGTTCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp GGGGTGGGCAGTGCCAGAGGCGAACGGGCACAGGTCATTACTGCGTGTGTGGCTGCTCTTGGAGAAGCCTaGGCAGGACGAGGTGGACCA +
Preference number: 4 (lower is better)
Translates to: GVGSARGERAQVITACVAALGEA*AGRGGP
Trigger: TGGTCCACCTCGTCCTGCGCAGGCTTCTCCAAGAGC...AGCCACACACGCAGTAATGACCTGTGCCCGTTCGCCTCTGGCACTGCCCACCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp GGGGTGGGCAGTGCCAGAGGCGAACGGGCACAGGTCATTACTGCGTGTGTGGCTTTGGGCTGGCCGACCTaGAGACCTCTCGGGAGACAA +
Preference number: 4 (lower is better)
Translates to: GVGSARGERAQVITACVALGWPT*RPLGRQ
Trigger: TTGTCTCCCGAGAGGTCTGCAGGTCGGCCAGCCCAA...AGCCACACACGCAGTAATGACCTGTGCCCGTTCGCCTCTGGCACTGCCCACCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp GGAGAACGGAGCACAGTTCCTTCCGTGCCTCCTGCCGGCGCTGCTCAAGGTGTGCTCCTCAAAGGTGGTTaGCGGGGTGCAGAGCAGCAC +
Preference number: 4 (lower is better)
Translates to: GERSTVPSVPPAGAAQGVLLKGG*RGAEQH
Trigger: GTGCTGCTCTGCACCCCGGCAACCACCTTTGAGGAG...CACACCTTGAGCAGCGCCGGCAGGAGGCACGGAAGGAACTGTGCTCCGTTCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp GGGCAGCCGTGGCCAGCAGGGAGCTTCCTCATGTGGCATTGCCTGCGAGACTGTACGAAGGACACTCCATaGGTCCTGCTGGGACTGCCC +
Preference number: 4 (lower is better)
Translates to: GQPWPAGSFLMWHCLRDCTKDTP*VLLGLP
Trigger: GGGCAGTCCCAGCAGGACCCATGGAGTGTCCTTCGT...ACAGTCTCGCAGGCAATGCCACATGAGGAAGCTCCCTGCTGGCCACGGCTGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319921.4
CDS-3UTR CCA 90 bp GGGCAGCCGTGGCCAGCAGGGAGCTTCCTCATGTGGCATTGCCTGCGAGACTGTTGCTCCGCGGGGAATTaGATTTCCACCAGCCGCCTC +
Preference number: 4 (lower is better)
Translates to: GQPWPAGSFLMWHCLRDCCSAGN*ISTSRL
Trigger: GAGGCGGCTGGTGGAAATCCAATTCCCCGCGGAGCA...ACAGTCTCGCAGGCAATGCCACATGAGGAAGCTCCCTGCTGGCCACGGCTGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319921.4
CDS-3UTR CCA 90 bp GGGGTGGGCAGTGCCAGAGGCGAACGGGCACAGGTCATTACTGCGTGTGTGGCTTGCTCCGCGGGGAATTaGATTTCCACCAGCCGCCTC +
Preference number: 4 (lower is better)
Translates to: GVGSARGERAQVITACVACSAGN*ISTSRL
Trigger: GAGGCGGCTGGTGGAAATCCAATTCCCCGCGGAGCA...AGCCACACACGCAGTAATGACCTGTGCCCGTTCGCCTCTGGCACTGCCCACCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp ACAGTGATGACAGGGCCATCTGAGGAACGGCCTGCAAGCCCGTGTGACTTGTGCCAGCGCCATTGCCCTTaGCGAGGGAGGAGGGTGCCC +
Preference number: 4 (lower is better)
Translates to: TVMTGPSEERPASPCDLCQRHCP*RGRRVP
Trigger: GGGCACCCTCCTCCCTCGCCAAGGGCAATGGCGCTG...GCACAAGTCACACGGGCTTGCAGGCCGTTCCTCAGATGGCCCTGTCATCACTGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319921.4
CDS-3UTR CCA 90 bp GGGGTGGGCAGTGCCAGAGGCGAACGGGCACAGGTCATTACTGCGTGTGTGGCTCAGGCCCCGTCGGCGTaGCAAGAGGATCTCAAACTC +
Preference number: 4 (lower is better)
Translates to: GVGSARGERAQVITACVAQAPSA*QEDLKL
Trigger: GAGTTTGAGATCCTCTTGCCACGCCGACGGGGCCTG...AGCCACACACGCAGTAATGACCTGTGCCCGTTCGCCTCTGGCACTGCCCACCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp TCAGCAAGCCAGCCCCCGGCCCCCACACCCGTTCATAGGCAGTCGGAATGCAGACAGGCCCCGTCGGCGTaGCAAGAGGATCTCAAACTC +
Preference number: 4 (lower is better)
Translates to: SASQPPAPTPVHRQSECRQAPSA*QEDLKL
Trigger: GAGTTTGAGATCCTCTTGCCACGCCGACGGGGCCTG...TCTGCATTCCGACTGCCTATGAACGGGTGTGGGGGCCGGGGGCTGGCTTGCTGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp TCAGCAAGCCAGCCCCCGGCCCCCACACCCGTTCATAGGCAGTCGGAATGCAGAGGCAACACCTCGGAGTaGCCACAGACGACGAGGTTG +
Preference number: 4 (lower is better)
Translates to: SASQPPAPTPVHRQSECRGNTSE*PQTTRL
Trigger: CAACCTCGTCGTCTGTGGCCACTCCGAGGTGTTGCC...TCTGCATTCCGACTGCCTATGAACGGGTGTGGGGGCCGGGGGCTGGCTTGCTGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp GGAGAACGGAGCACAGTTCCTTCCGTGCCTCCTGCCGGCGCTGCTCAAGGTGTGTCTTGGCGAGAGACTTaGAGCTGCCGGGCTTCCCCA +
Preference number: 4 (lower is better)
Translates to: GERSTVPSVPPAGAAQGVSWRET*SCRASP
Trigger: TGGGGAAGCCCGGCAGCTCCAAGTCTCTCGCCAAGA...CACACCTTGAGCAGCGCCGGCAGGAGGCACGGAAGGAACTGTGCTCCGTTCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp GGGGTGGGCAGTGCCAGAGGCGAACGGGCACAGGTCATTACTGCGTGTGTGGCTTCCTGGAGAGCGTCCTaGTTGCAGGCTTCCCTTGCC +
Preference number: 4 (lower is better)
Translates to: GVGSARGERAQVITACVASWRAS*LQASLA
Trigger: GGCAAGGGAAGCCTGCAACCAGGACGCTCTCCAGGA...AGCCACACACGCAGTAATGACCTGTGCCCGTTCGCCTCTGGCACTGCCCACCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp TCAGCAAGCCAGCCCCCGGCCCCCACACCCGTTCATAGGCAGTCGGAATGCAGATTCCACCTCCGAGCTTaGGCCAGCAAGTCTTCAGGC +
Preference number: 4 (lower is better)
Translates to: SASQPPAPTPVHRQSECRFHLRA*ASKSSG
Trigger: GCCTGAAGACTTGCTGGCTCAAGCTCGGAGGTGGAA...TCTGCATTCCGACTGCCTATGAACGGGTGTGGGGGCCGGGGGCTGGCTTGCTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp AGCTCCGAGTGCAAGTTGAAGACTTCAGCAAGCCAGCCCCCGGCCCCCACACCCTCGGGGGCTGCTTCCTaGGCTCAGTGCTCAGGTAAA +
Preference number: 4 (lower is better)
Translates to: SSECKLKTSASQPPAPTPSGAAS*AQCSGK
Trigger: TTTACCTGAGCACTGAGCTCAGGAAGCAGCCCCCGA...GGGTGTGGGGGCCGGGGGCTGGCTTGCTGAAGTCTTCAACTTGCACTCGGAGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp AGCTCCGAGTGCAAGTTGAAGACTTCAGCAAGCCAGCCCCCGGCCCCCACACCCTTCCTCGGGCGCTTCTaGCGCCGCTTTCAGTTTCCT +
Preference number: 4 (lower is better)
Translates to: SSECKLKTSASQPPAPTPFLGRF*RRFQFP
Trigger: AGGAAACTGAAAGCGGCGTCAGAAGCGCCCGAGGAA...GGGTGTGGGGGCCGGGGGCTGGCTTGCTGAAGTCTTCAACTTGCACTCGGAGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp AGCTCCGAGTGCAAGTTGAAGACTTCAGCAAGCCAGCCCCCGGCCCCCACACCCCCAGAGTGGTCAGGGTaGAGGAGCCCTTGGATTTGG +
Preference number: 4 (lower is better)
Translates to: SSECKLKTSASQPPAPTPPEWSG*RSPWIW
Trigger: CCAAATCCAAGGGCTCCTTCACCCTGACCACTCTGG...GGGTGTGGGGGCCGGGGGCTGGCTTGCTGAAGTCTTCAACTTGCACTCGGAGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR GCA 90 bp GGGCAGCCGTGGCCAGCAGGGAGCTTCCTCATGTGGCATTGCCTGCGAGACTGTTTCAGTTTCATTTTCTaGGGCCCCCGAGCTCGCCGC +
Preference number: 4 (lower is better)
Translates to: GQPWPAGSFLMWHCLRDCFSFIF*GPRARR
Trigger: GCGGCGAGCTCGGGGGCCGCAGAAAATGAAACTGAA...ACAGTCTCGCAGGCAATGCCACATGAGGAAGCTCCCTGCTGGCCACGGCTGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000319921.4
CDS-3UTR GCA 90 bp GGGCAGCCGTGGCCAGCAGGGAGCTTCCTCATGTGGCATTGCCTGCGAGACTGTTCCCGGGCTCAGAGCTaGCTCCTTTTGACTCAGGCA +
Preference number: 4 (lower is better)
Translates to: GQPWPAGSFLMWHCLRDCSRAQS*LLLTQA
Trigger: TGCCTGAGTCAAAAGGAGGCAGCTCTGAGCCCGGGA...ACAGTCTCGCAGGCAATGCCACATGAGGAAGCTCCCTGCTGGCCACGGCTGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319921.4
CDS-3UTR GCA 90 bp GGAGAACGGAGCACAGTTCCTTCCGTGCCTCCTGCCGGCGCTGCTCAAGGTGTGCCCGGCCCCTTTAACTaGATTGGCTGGCTCAGCTAC +
Preference number: 4 (lower is better)
Translates to: GERSTVPSVPPAGAAQGVPGPFN*IGWLSY
Trigger: GTAGCTGAGCCAGCCAATGCAGTTAAAGGGGCCGGG...CACACCTTGAGCAGCGCCGGCAGGAGGCACGGAAGGAACTGTGCTCCGTTCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp GGGCAGCCGTGGCCAGCAGGGAGCTTCCTCATGTGGCATTGCCTGCGAGACTGTCGGGCTCAGCGTGCTTaGCTTCACTTCCTGGACATC +
Preference number: 4 (lower is better)
Translates to: GQPWPAGSFLMWHCLRDCRAQRA*LHFLDI
Trigger: GATGTCCAGGAAGTGAAGGCAAGCACGCTGAGCCCG...ACAGTCTCGCAGGCAATGCCACATGAGGAAGCTCCCTGCTGGCCACGGCTGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319921.4
CDS-3UTR GCA 90 bp TCAGCAAGCCAGCCCCCGGCCCCCACACCCGTTCATAGGCAGTCGGAATGCAGACGGGCTCAGCGTGCTTaGCTTCACTTCCTGGACATC +
Preference number: 4 (lower is better)
Translates to: SASQPPAPTPVHRQSECRRAQRA*LHFLDI
Trigger: GATGTCCAGGAAGTGAAGGCAAGCACGCTGAGCCCG...TCTGCATTCCGACTGCCTATGAACGGGTGTGGGGGCCGGGGGCTGGCTTGCTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp TCAGCAAGCCAGCCCCCGGCCCCCACACCCGTTCATAGGCAGTCGGAATGCAGAATCCGGGCCACCTCTTaGAGGTATTCAACCGAGGCC +
Preference number: 4 (lower is better)
Translates to: SASQPPAPTPVHRQSECRIRATS*RYSTEA
Trigger: GGCCTCGGTTGAATACCTGCAAGAGGTGGCCCGGAT...TCTGCATTCCGACTGCCTATGAACGGGTGTGGGGGCCGGGGGCTGGCTTGCTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp AGCTCCGAGTGCAAGTTGAAGACTTCAGCAAGCCAGCCCCCGGCCCCCACACCCGCGCTGCTCAAGGTGTaGATGGCTGAGTCCTGGACA +
Preference number: 4 (lower is better)
Translates to: SSECKLKTSASQPPAPTPALLKV*MAESWT
Trigger: TGTCCAGGACTCAGCCATGCACACCTTGAGCAGCGC...GGGTGTGGGGGCCGGGGGCTGGCTTGCTGAAGTCTTCAACTTGCACTCGGAGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp AGCTCCGAGTGCAAGTTGAAGACTTCAGCAAGCCAGCCCCCGGCCCCCACACCCGTGACGAAGACCTTGTaGTGGCTGAAGGCAGAGGGG +
Preference number: 4 (lower is better)
Translates to: SSECKLKTSASQPPAPTPVTKTL*WLKAEG
Trigger: CCCCTCTGCCTTCAGCCAGCACAAGGTCTTCGTCAC...GGGTGTGGGGGCCGGGGGCTGGCTTGCTGAAGTCTTCAACTTGCACTCGGAGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp TCAGCAAGCCAGCCCCCGGCCCCCACACCCGTTCATAGGCAGTCGGAATGCAGAGACACCAGGTGGACCTaGTTCAGGCTGCGGAAGAGA +
Preference number: 4 (lower is better)
Translates to: SASQPPAPTPVHRQSECRDTRWT*FRLRKR
Trigger: TCTCTTCCGCAGCCTGAAGCAGGTCCACCTGGTGTC...TCTGCATTCCGACTGCCTATGAACGGGTGTGGGGGCCGGGGGCTGGCTTGCTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp AGCTCCGAGTGCAAGTTGAAGACTTCAGCAAGCCAGCCCCCGGCCCCCACACCCGGGCCCAGTTGGAGATaGCCACGAAGCCGACCTTTT +
Preference number: 4 (lower is better)
Translates to: SSECKLKTSASQPPAPTPGPSWR*PRSRPF
Trigger: AAAAGGTCGGCTTCGTGGGCATCTCCAACTGGGCCC...GGGTGTGGGGGCCGGGGGCTGGCTTGCTGAAGTCTTCAACTTGCACTCGGAGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp GGAGAACGGAGCACAGTTCCTTCCGTGCCTCCTGCCGGCGCTGCTCAAGGTGTGAGCCTCTCTCCGCACTaGCTGCAGAACTTGGGGGTT +
Preference number: 4 (lower is better)
Translates to: GERSTVPSVPPAGAAQGVSLSPH*LQNLGV
Trigger: AACCCCCAAGTTCTGCAGCCAGTGCGGAGAGAGGCT...CACACCTTGAGCAGCGCCGGCAGGAGGCACGGAAGGAACTGTGCTCCGTTCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp ACAGTGATGACAGGGCCATCTGAGGAACGGCCTGCAAGCCCGTGTGACTTGTGCCTTCACCAGCAGAGGTaGGGGGACCGGTCCCCTCCT +
Preference number: 4 (lower is better)
Translates to: TVMTGPSEERPASPCDLCLHQQR*GDRSPP
Trigger: AGGAGGGGACCGGTCCCCCCACCTCTGCTGGTGAAG...GCACAAGTCACACGGGCTTGCAGGCCGTTCCTCAGATGGCCCTGTCATCACTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000319921.4
CDS-3UTR CCA 90 bp TCAGCAAGCCAGCCCCCGGCCCCCACACCCGTTCATAGGCAGTCGGAATGCAGATGCTCTGGCGTGGGGTaGAGGCTTGCATTGTGGGAT +
Preference number: 4 (lower is better)
Translates to: SASQPPAPTPVHRQSECRCSGVG*RLALWD
Trigger: ATCCCACAATGCAAGCCTCCACCCCACGCCAGAGCA...TCTGCATTCCGACTGCCTATGAACGGGTGTGGGGGCCGGGGGCTGGCTTGCTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp AGCTCCGAGTGCAAGTTGAAGACTTCAGCAAGCCAGCCCCCGGCCCCCACACCCTGCTCTGGCGTGGGGTaGAGGCTTGCATTGTGGGAT +
Preference number: 4 (lower is better)
Translates to: SSECKLKTSASQPPAPTPCSGVG*RLALWD
Trigger: ATCCCACAATGCAAGCCTCCACCCCACGCCAGAGCA...GGGTGTGGGGGCCGGGGGCTGGCTTGCTGAAGTCTTCAACTTGCACTCGGAGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp TCAGCAAGCCAGCCCCCGGCCCCCACACCCGTTCATAGGCAGTCGGAATGCAGACTGCCCTCCTCCACCTaGTACTGGCAGTTGGAGAGA +
Preference number: 4 (lower is better)
Translates to: SASQPPAPTPVHRQSECRLPSST*YWQLER
Trigger: TCTCTCCAACTGCCAGTACCAGGTGGAGGAGGGCAG...TCTGCATTCCGACTGCCTATGAACGGGTGTGGGGGCCGGGGGCTGGCTTGCTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp AGCTCCGAGTGCAAGTTGAAGACTTCAGCAAGCCAGCCCCCGGCCCCCACACCCGCGAGTTCGAGGAGGTaGACAGTCTCACTGTCACGG +
Preference number: 4 (lower is better)
Translates to: SSECKLKTSASQPPAPTPASSRR*TVSLSR
Trigger: CCGTGACAGTGAGACTGTCCACCTCCTCGAACTCGC...GGGTGTGGGGGCCGGGGGCTGGCTTGCTGAAGTCTTCAACTTGCACTCGGAGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp TCAGCAAGCCAGCCCCCGGCCCCCACACCCGTTCATAGGCAGTCGGAATGCAGACCTTGGACTCGGTCCTaGACGAGGATGTCTGAGGAG +
Preference number: 4 (lower is better)
Translates to: SASQPPAPTPVHRQSECRPWTRS*TRMSEE
Trigger: CTCCTCAGACATCCTCGTCCAGGACCGAGTCCAAGG...TCTGCATTCCGACTGCCTATGAACGGGTGTGGGGGCCGGGGGCTGGCTTGCTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp TCAGCAAGCCAGCCCCCGGCCCCCACACCCGTTCATAGGCAGTCGGAATGCAGAGACGCAAAGTACCCTTaGACTCGGTCCTGGACGAGG +
Preference number: 4 (lower is better)
Translates to: SASQPPAPTPVHRQSECRDAKYP*TRSWTR
Trigger: CCTCGTCCAGGACCGAGTCCAAGGGTACTTTGCGTC...TCTGCATTCCGACTGCCTATGAACGGGTGTGGGGGCCGGGGGCTGGCTTGCTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp GGAGAACGGAGCACAGTTCCTTCCGTGCCTCCTGCCGGCGCTGCTCAAGGTGTGGTGCAGCTCTCGTTCTaGTCTCTGAGCATGCCCACG +
Preference number: 4 (lower is better)
Translates to: GERSTVPSVPPAGAAQGVVQLSF*SLSMPT
Trigger: CGTGGGCATGCTCAGAGACCAGAACGAGAGCTGCAC...CACACCTTGAGCAGCGCCGGCAGGAGGCACGGAAGGAACTGTGCTCCGTTCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp AGCTCCGAGTGCAAGTTGAAGACTTCAGCAAGCCAGCCCCCGGCCCCCACACCCGTGCAGCTCTCGTTCTaGTCTCTGAGCATGCCCACG +
Preference number: 4 (lower is better)
Translates to: SSECKLKTSASQPPAPTPVQLSF*SLSMPT
Trigger: CGTGGGCATGCTCAGAGACCAGAACGAGAGCTGCAC...GGGTGTGGGGGCCGGGGGCTGGCTTGCTGAAGTCTTCAACTTGCACTCGGAGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
3UTR CAA 72 bp GGGCCATCTGAGGAACGGCCTGCAAGCCCGTGTGACTaGTGCCACACGCGCACGGCCGTGATTCCATATGGA +
Preference number: 4 (lower is better)
Translates to: GPSEERPASPCD*CHTRTAVIPYG
Trigger: TCCATATGGAATCACGGCCGTGCGCGTGTGGCACAAGTCACACGGGCTTGCAGGCCGTTCCTCAGATGGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319921.4
CDS-3UTR TCA 90 bp GGGGTGGGCAGTGCCAGAGGCGAACGGGCACAGGTCATTACTGCGTGTGTGGCTAGTCAGGTAGGATGGTaGCAAGGCCTCCTCGGGAAT +
Preference number: 4 (lower is better)
Translates to: GVGSARGERAQVITACVASQVGW*QGLLGN
Trigger: ATTCCCGAGGAGGCCTTGTCACCATCCTACCTGACT...AGCCACACACGCAGTAATGACCTGTGCCCGTTCGCCTCTGGCACTGCCCACCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp CTGGACTTCCCCTGTGGCCGCAAGGCTGTGCTTGTACAGGGGTTAAGTGTCCAAGCCTGCAAGCCCGTGTaGCTTGTGCCACACGCGCAC +
Preference number: 4 (lower is better)
Translates to: LDFPCGRKAVLVQGLSVQACKPV*LVPHAH
Trigger: GTGCGCGTGTGGCACAAGTCACACGGGCTTGCAGGC...TTGGACACTTAACCCCTGTACAAGCACAGCCTTGCGGCCACAGGGGAAGTCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319921.4
CDS-3UTR TCA 90 bp GGGGTGGGCAGTGCCAGAGGCGAACGGGCACAGGTCATTACTGCGTGTGTGGCTCTGCCTCAACCCATCTaGGCTGTGCTTGCTGAGGAA +
Preference number: 4 (lower is better)
Translates to: GVGSARGERAQVITACVALPQPI*AVLAEE
Trigger: TTCCTCAGCAAGCACAGCTCAGATGGGTTGAGGCAG...AGCCACACACGCAGTAATGACCTGTGCCCGTTCGCCTCTGGCACTGCCCACCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp CACTGGTGGCACCATGACAGTGAGGAGAACGGAGCACAGTTCCTTCCGTGCCTCGAGTGGGTATTCCCTTaGGGCTCAGCCGGGGCTTGC +
Preference number: 4 (lower is better)
Translates to: HWWHHDSEENGAQFLPCLEWVFP*GSAGAC
Trigger: GCAAGCCCCGGCTGAGCCTCAAGGGAATACCCACTC...GAGGCACGGAAGGAACTGTGCTCCGTTCTCCTCACTGTCATGGTGCCACCAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp GGGGTGGGCAGTGCCAGAGGCGAACGGGCACAGGTCATTACTGCGTGTGTGGCTGCTCCGAGTGCAAGTTaGAGACTTCAGCAAGCCAGC +
Preference number: 4 (lower is better)
Translates to: GVGSARGERAQVITACVAAPSAS*RLQQAS
Trigger: GCTGGCTTGCTGAAGTCTTCAACTTGCACTCGGAGC...AGCCACACACGCAGTAATGACCTGTGCCCGTTCGCCTCTGGCACTGCCCACCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp GGGGTGGGCAGTGCCAGAGGCGAACGGGCACAGGTCATTACTGCGTGTGTGGCTCTGAGACTGGCAGGCTaGGCTCACGGCTTCAATGAT +
Preference number: 4 (lower is better)
Translates to: GVGSARGERAQVITACVALRLAG*AHGFND
Trigger: ATCATTGAAGCCGTGAGCTCAGCCTGCCAGTCTCAG...AGCCACACACGCAGTAATGACCTGTGCCCGTTCGCCTCTGGCACTGCCCACCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp GGGGTGGGCAGTGCCAGAGGCGAACGGGCACAGGTCATTACTGCGTGTGTGGCTTCACCACGAACTTCTTaGAGCCCCTCAGTGTGTCGC +
Preference number: 4 (lower is better)
Translates to: GVGSARGERAQVITACVASPRTS*SPSVCR
Trigger: GCGACACACTGAGGGGCTTCAAGAAGTTCGTGGTGA...AGCCACACACGCAGTAATGACCTGTGCCCGTTCGCCTCTGGCACTGCCCACCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp GGAGAACGGAGCACAGTTCCTTCCGTGCCTCCTGCCGGCGCTGCTCAAGGTGTGTCAGACACCTTCTGGTaGAGTTCCTCCGTCAAGGCC +
Preference number: 4 (lower is better)
Translates to: GERSTVPSVPPAGAAQGVSDTFW*SSSVKA
Trigger: GGCCTTGACGGAGGAACTTCACCAGAAGGTGTCTGA...CACACCTTGAGCAGCGCCGGCAGGAGGCACGGAAGGAACTGTGCTCCGTTCTCC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp GGGCAGCCGTGGCCAGCAGGGAGCTTCCTCATGTGGCATTGCCTGCGAGACTGTTCCTCCTTCAGCTCCTaGCCACACTCCATTTCACCC +
Preference number: 4 (lower is better)
Translates to: GQPWPAGSFLMWHCLRDCSSFSS*PHSISP
Trigger: GGGTGAAATGGAGTGTGGGCAGGAGCTGAAGGAGGA...ACAGTCTCGCAGGCAATGCCACATGAGGAAGCTCCCTGCTGGCCACGGCTGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319921.4
CDS-3UTR GCA 90 bp CGGGGGCCTGCTACACACTGCTCTGGCCAGGCATTCCACTGGGGCAATTGCCTGATGGTGTCCCAGGTCTaGAGGATGCTGAAGGTGCTG +
Preference number: 4 (lower is better)
Translates to: RGPATHCSGQAFHWGNCLMVSQV*RMLKVL
Trigger: CAGCACCTTCAGCATCCTGCAGACCTGGGACACCAT...CAGGCAATTGCCCCAGTGGAATGCCTGGCCAGAGCAGTGTGTAGCAGGCCCCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR GCA 90 bp ACAGTGATGACAGGGCCATCTGAGGAACGGCCTGCAAGCCCGTGTGACTTGTGCCTCCAGGCATCCTTGTaGCGCGGGGCCAGCTCCATA +
Preference number: 4 (lower is better)
Translates to: TVMTGPSEERPASPCDLCLQASL*RGASSI
Trigger: TATGGAGCTGGCCCCGCGGCACAAGGATGCCTGGAG...GCACAAGTCACACGGGCTTGCAGGCCGTTCCTCAGATGGCCCTGTCATCACTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319921.4
CDS-3UTR GCA 90 bp TCAGCAAGCCAGCCCCCGGCCCCCACACCCGTTCATAGGCAGTCGGAATGCAGACTCTCGGCCCCGGCTTaGTGGAGAATATGCCTTAAG +
Preference number: 4 (lower is better)
Translates to: SASQPPAPTPVHRQSECRLSAPA*WRICLK
Trigger: CTTAAGGCATATTCTCCAGCAAGCCGGGGCCGAGAG...TCTGCATTCCGACTGCCTATGAACGGGTGTGGGGGCCGGGGGCTGGCTTGCTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp GGGGTGGGCAGTGCCAGAGGCGAACGGGCACAGGTCATTACTGCGTGTGTGGCTGGCAGTCAATGCAGATaGTCTGTTCCATCGGCCTGC +
Preference number: 4 (lower is better)
Translates to: GVGSARGERAQVITACVAGSQCR*SVPSAC
Trigger: GCAGGCCGATGGAACAGAGCATCTGCATTGACTGCC...AGCCACACACGCAGTAATGACCTGTGCCCGTTCGCCTCTGGCACTGCCCACCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp AGCTCCGAGTGCAAGTTGAAGACTTCAGCAAGCCAGCCCCCGGCCCCCACACCCGAGGTTTGTGGTCAATaGCTCCAATCGGCGCATGGC +
Preference number: 4 (lower is better)
Translates to: SSECKLKTSASQPPAPTPEVCGQ*LQSAHG
Trigger: GCCATGCGCCGATTGGAGGCATTGACCACAAACCTC...GGGTGTGGGGGCCGGGGGCTGGCTTGCTGAAGTCTTCAACTTGCACTCGGAGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp GGAGAACGGAGCACAGTTCCTTCCGTGCCTCCTGCCGGCGCTGCTCAAGGTGTGCAGCTGTCAAGGAAGTaGTCCATCTGCCTGCAGAGG +
Preference number: 4 (lower is better)
Translates to: GERSTVPSVPPAGAAQGVQLSRK*SICLQR
Trigger: CCTCTGCAGGCAGATGGAGCACTTCCTTGACAGCTG...CACACCTTGAGCAGCGCCGGCAGGAGGCACGGAAGGAACTGTGCTCCGTTCTCC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp GGGGTGGGCAGTGCCAGAGGCGAACGGGCACAGGTCATTACTGCGTGTGTGGCTTCCATGGTGACCATGTaGTTCCCCGGGCTTTGGTCA +
Preference number: 4 (lower is better)
Translates to: GVGSARGERAQVITACVASMVTM*FPGLWS
Trigger: TGACCAAAGCCCGGGGAAGCACATGGTCACCATGGA...AGCCACACACGCAGTAATGACCTGTGCCCGTTCGCCTCTGGCACTGCCCACCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp AGCTCCGAGTGCAAGTTGAAGACTTCAGCAAGCCAGCCCCCGGCCCCCACACCCCGGGATCGTCTTCAATaGATCCGTCTTCCAGCAGCG +
Preference number: 4 (lower is better)
Translates to: SSECKLKTSASQPPAPTPRDRLQ*IRLPAA
Trigger: CGCTGCTGGAAGACGGATGCATTGAAGACGATCCCG...GGGTGTGGGGGCCGGGGGCTGGCTTGCTGAAGTCTTCAACTTGCACTCGGAGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp AGCTCCGAGTGCAAGTTGAAGACTTCAGCAAGCCAGCCCCCGGCCCCCACACCCCCTAAGGACAGCCTGTaGAATGTCTTGCGGGGAAGG +
Preference number: 4 (lower is better)
Translates to: SSECKLKTSASQPPAPTPPKDSL*NVLRGR
Trigger: CCTTCCCCGCAAGACATTGCACAGGCTGTCCTTAGG...GGGTGTGGGGGCCGGGGGCTGGCTTGCTGAAGTCTTCAACTTGCACTCGGAGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp TCAGCAAGCCAGCCCCCGGCCCCCACACCCGTTCATAGGCAGTCGGAATGCAGATCCGCATATTGCGCGTaGAGCTCTCGTTCTGGTCTC +
Preference number: 4 (lower is better)
Translates to: SASQPPAPTPVHRQSECRSAYCA*SSRSGL
Trigger: GAGACCAGAACGAGAGCTGCACGCGCAATATGCGGA...TCTGCATTCCGACTGCCTATGAACGGGTGTGGGGGCCGGGGGCTGGCTTGCTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp GGGCAGCCGTGGCCAGCAGGGAGCTTCCTCATGTGGCATTGCCTGCGAGACTGTTGGGGGTTTCCTCCTTaGAGACATGCTGGCACGAAG +
Preference number: 4 (lower is better)
Translates to: GQPWPAGSFLMWHCLRDCWGFPP*RHAGTK
Trigger: CTTCGTGCCAGCATGTCTCCAAGGAGGAAACCCCCA...ACAGTCTCGCAGGCAATGCCACATGAGGAAGCTCCCTGCTGGCCACGGCTGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000319921.4
CDS-3UTR CCA 90 bp CAGATCTCGGTGGCAGGTGGCTCTGCACAGTCCAGAGTGATAAAACAATCACAGGGGGGCTGGCTCGGCTaGCCAGTGGGGCCACTCTGC +
Preference number: 4 (lower is better)
Translates to: QISVAGGSAQSRVIKQSQGGWLG*PVGPLC
Trigger: GCAGAGTGGCCCCACTGGCCAGCCGAGCCAGCCCCC...CTGTGATTGTTTTATCACTCTGGACTGTGCAGAGCCACCTGCCACCGAGATCTG
61% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp ATTGTTTATGCCTGCAGAGGGGAGTGGGTGACTAGAGGGGAGGAGGATGATGGCTGTCGCCAACCTCGGTaGGCGCGGAGAGGCCGTCAC +
Preference number: 4 (lower is better)
Translates to: IVYACRGEWVTRGEEDDGCRQPR*ARRGRH
Trigger: GTGACGGCCTCTCCGCGCCCACCGAGGTTGGCGACA...GCCATCATCCTCCTCCCCTCTAGTCACCCACTCCCCTCTGCAGGCATAAACAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319921.4
CDS-3UTR CCA 90 bp ACAGTGATGACAGGGCCATCTGAGGAACGGCCTGCAAGCCCGTGTGACTTGTGCGGGATGGAAGCGTCCTaGTCCTCCCCTTCCGTGTGG +
Preference number: 4 (lower is better)
Translates to: TVMTGPSEERPASPCDLCGMEAS*SSPSVW
Trigger: CCACACGGAAGGGGAGGACCAGGACGCTTCCATCCC...GCACAAGTCACACGGGCTTGCAGGCCGTTCCTCAGATGGCCCTGTCATCACTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319921.4
CDS-3UTR CCA 90 bp GGGCAGCCGTGGCCAGCAGGGAGCTTCCTCATGTGGCATTGCCTGCGAGACTGTCCCTTAGCTGGGTCATaGCAGAACACAGCTGTGAGC +
Preference number: 4 (lower is better)
Translates to: GQPWPAGSFLMWHCLRDCPLAGS*QNTAVS
Trigger: GCTCACAGCTGTGTTCTGCCATGACCCAGCTAAGGG...ACAGTCTCGCAGGCAATGCCACATGAGGAAGCTCCCTGCTGGCCACGGCTGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319921.4
CDS-3UTR CCA 90 bp GGAGAACGGAGCACAGTTCCTTCCGTGCCTCCTGCCGGCGCTGCTCAAGGTGTGATGCGCCATGGTGGCTaGGGAGAAGGCCAGATTCTT +
Preference number: 4 (lower is better)
Translates to: GERSTVPSVPPAGAAQGVMRHGG*GEGQIL
Trigger: AAGAATCTGGCCTTCTCCCCAGCCACCATGGCGCAT...CACACCTTGAGCAGCGCCGGCAGGAGGCACGGAAGGAACTGTGCTCCGTTCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp GGAGAACGGAGCACAGTTCCTTCCGTGCCTCCTGCCGGCGCTGCTCAAGGTGTGGTTGGAGAGAATCAGTaGAGTCAGGTCCCGCTCCAC +
Preference number: 4 (lower is better)
Translates to: GERSTVPSVPPAGAAQGVVGENQ*SQVPLH
Trigger: GTGGAGCGGGACCTGACTCCACTGATTCTCTCCAAC...CACACCTTGAGCAGCGCCGGCAGGAGGCACGGAAGGAACTGTGCTCCGTTCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp TCAGCAAGCCAGCCCCCGGCCCCCACACCCGTTCATAGGCAGTCGGAATGCAGAAACTCTGCGGCTTCCTaGTCCTCCTTAGGCTCACTC +
Preference number: 4 (lower is better)
Translates to: SASQPPAPTPVHRQSECRNSAAS*SSLGSL
Trigger: GAGTGAGCCTAAGGAGGACCAGGAAGCCGCAGAGTT...TCTGCATTCCGACTGCCTATGAACGGGTGTGGGGGCCGGGGGCTGGCTTGCTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp CACTGGTGGCACCATGACAGTGAGGAGAACGGAGCACAGTTCCTTCCGTGCCTCCCGGGCGCGAACAGCTaGCTGATGGTGACATGCTGC +
Preference number: 4 (lower is better)
Translates to: HWWHHDSEENGAQFLPCLPGANS*LMVTCC
Trigger: GCAGCATGTCACCATCAGCCAGCTGTTCGCGCCCGG...GAGGCACGGAAGGAACTGTGCTCCGTTCTCCTCACTGTCATGGTGCCACCAGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp GGAGAACGGAGCACAGTTCCTTCCGTGCCTCCTGCCGGCGCTGCTCAAGGTGTGGGGCATGCTTTTCAATaGCTTCCCTGTGCGCTTGGG +
Preference number: 4 (lower is better)
Translates to: GERSTVPSVPPAGAAQGVGHAFQ*LPCALG
Trigger: CCCAAGCGCACAGGGAAGCCATTGAAAAGCATGCCC...CACACCTTGAGCAGCGCCGGCAGGAGGCACGGAAGGAACTGTGCTCCGTTCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp GGAGAACGGAGCACAGTTCCTTCCGTGCCTCCTGCCGGCGCTGCTCAAGGTGTGAGCCTCCCAGGTAGCTaGGATTACAGGTGTGCACAC +
Preference number: 4 (lower is better)
Translates to: GERSTVPSVPPAGAAQGVSLPGS*DYRCAH
Trigger: GTGTGCACACCTGTAATCCCAGCTACCTGGGAGGCT...CACACCTTGAGCAGCGCCGGCAGGAGGCACGGAAGGAACTGTGCTCCGTTCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR CCA 90 bp TCAGCAAGCCAGCCCCCGGCCCCCACACCCGTTCATAGGCAGTCGGAATGCAGAGAAGTGGCTGTCCTCTaGGTTGAGGTTCTGTTGCGC +
Preference number: 4 (lower is better)
Translates to: SASQPPAPTPVHRQSECREVAVL*VEVLLR
Trigger: GCGCAACAGAACCTCAACCCAGAGGACAGCCACTTC...TCTGCATTCCGACTGCCTATGAACGGGTGTGGGGGCCGGGGGCTGGCTTGCTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR TCA 90 bp GGGCAGCCGTGGCCAGCAGGGAGCTTCCTCATGTGGCATTGCCTGCGAGACTGTAGAAGCTGTTCAGGTTaGTGGTGTCCCAGGTCTGCA +
Preference number: 4 (lower is better)
Translates to: GQPWPAGSFLMWHCLRDCRSCSG*WCPRSA
Trigger: TGCAGACCTGGGACACCATCAACCTGAACAGCTTCT...ACAGTCTCGCAGGCAATGCCACATGAGGAAGCTCCCTGCTGGCCACGGCTGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319921.4
CDS-3UTR TCA 90 bp GGGCAGCCGTGGCCAGCAGGGAGCTTCCTCATGTGGCATTGCCTGCGAGACTGTAGACAGTCCAGGATATaGGCAGGAAAACGACCCAGG +
Preference number: 4 (lower is better)
Translates to: GQPWPAGSFLMWHCLRDCRQSRI*AGKRPR
Trigger: CCTGGGTCGTTTTCCTGCTCATATCCTGGACTGTCT...ACAGTCTCGCAGGCAATGCCACATGAGGAAGCTCCCTGCTGGCCACGGCTGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319921.4
CDS-3UTR TCA 90 bp GGAGAACGGAGCACAGTTCCTTCCGTGCCTCCTGCCGGCGCTGCTCAAGGTGTGAGACAGTCCAGGATATaGGCAGGAAAACGACCCAGG +
Preference number: 4 (lower is better)
Translates to: GERSTVPSVPPAGAAQGVRQSRI*AGKRPR
Trigger: CCTGGGTCGTTTTCCTGCTCATATCCTGGACTGTCT...CACACCTTGAGCAGCGCCGGCAGGAGGCACGGAAGGAACTGTGCTCCGTTCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp CTGGACTTCCCCTGTGGCCGCAAGGCTGTGCTTGTACAGGGGTTAAGTGTCCAAGATGACAGGGCCATCTaGGGAACGGCCTGCAAGCCC +
Preference number: 4 (lower is better)
Translates to: LDFPCGRKAVLVQGLSVQDDRAI*GTACKP
Trigger: GGGCTTGCAGGCCGTTCCTCAGATGGCCCTGTCATC...TTGGACACTTAACCCCTGTACAAGCACAGCCTTGCGGCCACAGGGGAAGTCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319921.4
CDS-3UTR TCA 90 bp AGCTCCGAGTGCAAGTTGAAGACTTCAGCAAGCCAGCCCCCGGCCCCCACACCCCTGACGATCTGCCGCTaGATCTTCTCCAGATCGAAC +
Preference number: 4 (lower is better)
Translates to: SSECKLKTSASQPPAPTPLTICR*IFSRSN
Trigger: GTTCGATCTGGAGAAGATTCAGCGGCAGATCGTCAG...GGGTGTGGGGGCCGGGGGCTGGCTTGCTGAAGTCTTCAACTTGCACTCGGAGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp GGAGAACGGAGCACAGTTCCTTCCGTGCCTCCTGCCGGCGCTGCTCAAGGTGTGGCGTCTAGGCCAGTCTaGTTTAGGAATGTGCTGAGG +
Preference number: 4 (lower is better)
Translates to: GERSTVPSVPPAGAAQGVASRPV*FRNVLR
Trigger: CCTCAGCACATTCCTAAATCAGACTGGCCTAGACGC...CACACCTTGAGCAGCGCCGGCAGGAGGCACGGAAGGAACTGTGCTCCGTTCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp CACTGGTGGCACCATGACAGTGAGGAGAACGGAGCACAGTTCCTTCCGTGCCTCGCTCCTCGACGGCACTaGCGTCCTCCTTTCCAGGAT +
Preference number: 4 (lower is better)
Translates to: HWWHHDSEENGAQFLPCLAPRRH*RPPFQD
Trigger: ATCCTGGAAAGGAGGACGTCAGTGCCGTCGAGGAGC...GAGGCACGGAAGGAACTGTGCTCCGTTCTCCTCACTGTCATGGTGCCACCAGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp GGAGAACGGAGCACAGTTCCTTCCGTGCCTCCTGCCGGCGCTGCTCAAGGTGTGGCTCGTGGAACCACCTaGAAACTTTCACACAGCGCT +
Preference number: 4 (lower is better)
Translates to: GERSTVPSVPPAGAAQGVARGTT*KLSHSA
Trigger: AGCGCTGTGTGAAAGTTTTCAGGTGGTTCCACGAGC...CACACCTTGAGCAGCGCCGGCAGGAGGCACGGAAGGAACTGTGCTCCGTTCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp GGAGAACGGAGCACAGTTCCTTCCGTGCCTCCTGCCGGCGCTGCTCAAGGTGTGGGATCTCTCTCGGTGTaGTTTTTGCTGACGCTGGAC +
Preference number: 4 (lower is better)
Translates to: GERSTVPSVPPAGAAQGVGSLSV*FLLTLD
Trigger: GTCCAGCGTCAGCAAAAATCACACCGAGAGAGATCC...CACACCTTGAGCAGCGCCGGCAGGAGGCACGGAAGGAACTGTGCTCCGTTCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp GGGGTGGGCAGTGCCAGAGGCGAACGGGCACAGGTCATTACTGCGTGTGTGGCTGTGTGCAGGTGTGCCTaGAGGAAATCTGCAAAGGAG +
Preference number: 4 (lower is better)
Translates to: GVGSARGERAQVITACVAVCRCA*RKSAKE
Trigger: CTCCTTTGCAGATTTCCTTCAGGCACACCTGCACAC...AGCCACACACGCAGTAATGACCTGTGCCCGTTCGCCTCTGGCACTGCCCACCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp ATTGTTTATGCCTGCAGAGGGGAGTGGGTGACTAGAGGGGAGGAGGATGATGGCCCTGGGACAGGCCTCTaGCCCCAGAGGGGATGGAAG +
Preference number: 4 (lower is better)
Translates to: IVYACRGEWVTRGEEDDGPGTGL*PQRGWK
Trigger: CTTCCATCCCCTCTGGGGGCAGAGGCCTGTCCCAGG...GCCATCATCCTCCTCCCCTCTAGTCACCCACTCCCCTCTGCAGGCATAAACAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000319921.4
CDS-3UTR GCA 90 bp ATCAAGTCCACGCCGCAGACGAGGAGAGAGGAGTCTTCTCTCCAAAGTCATCCAGGAAACACCCACTGGTaGGGGCGGCCGGGCTTGGAG +
Preference number: 4 (lower is better)
Translates to: IKSTPQTRREESSLQSHPGNTHW*GRPGLE
Trigger: CTCCAAGCCCGGCCGCCCGCACCAGTGGGTGTTTCC...TGGATGACTTTGGAGAGAAGACTCCTCTCTCCTCGTCTGCGGCGTGGACTTGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp TCAGCAAGCCAGCCCCCGGCCCCCACACCCGTTCATAGGCAGTCGGAATGCAGAAACCCATCTGAGCTGTaGTTGCTGAGGAAGCCTCTG +
Preference number: 4 (lower is better)
Translates to: SASQPPAPTPVHRQSECRNPSEL*LLRKPL
Trigger: CAGAGGCTTCCTCAGCAAGCACAGCTCAGATGGGTT...TCTGCATTCCGACTGCCTATGAACGGGTGTGGGGGCCGGGGGCTGGCTTGCTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp GGAGAACGGAGCACAGTTCCTTCCGTGCCTCCTGCCGGCGCTGCTCAAGGTGTGCCAAATGGCTCTTTGTaGAGCCGCAGCAGCTGTTCA +
Preference number: 4 (lower is better)
Translates to: GERSTVPSVPPAGAAQGVPNGSL*SRSSCS
Trigger: TGAACAGCTGCTGCGGCTGCACAAAGAGCCATTTGG...CACACCTTGAGCAGCGCCGGCAGGAGGCACGGAAGGAACTGTGCTCCGTTCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp GGAGAACGGAGCACAGTTCCTTCCGTGCCTCCTGCCGGCGCTGCTCAAGGTGTGAAGTCAGTTACTGCCTaGAGTCTGGGTCACTCTGCC +
Preference number: 4 (lower is better)
Translates to: GERSTVPSVPPAGAAQGVKSVTA*SLGHSA
Trigger: GGCAGAGTGACCCAGACTGCAGGCAGTAACTGACTT...CACACCTTGAGCAGCGCCGGCAGGAGGCACGGAAGGAACTGTGCTCCGTTCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp GGAGAACGGAGCACAGTTCCTTCCGTGCCTCCTGCCGGCGCTGCTCAAGGTGTGAAGAGCATCGCGCTGTaGTCGTGGAACCACCTGAAA +
Preference number: 4 (lower is better)
Translates to: GERSTVPSVPPAGAAQGVKSIAL*SWNHLK
Trigger: TTTCAGGTGGTTCCACGAGCACAGCGCGATGCTCTT...CACACCTTGAGCAGCGCCGGCAGGAGGCACGGAAGGAACTGTGCTCCGTTCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp AGCTCCGAGTGCAAGTTGAAGACTTCAGCAAGCCAGCCCCCGGCCCCCACACCCTCCACGATGCTCTTCTaGCATTTCTCCAGCACCGTG +
Preference number: 4 (lower is better)
Translates to: SSECKLKTSASQPPAPTPSTMLF*HFSSTV
Trigger: CACGGTGCTGGAGAAATGGCAGAAGAGCATCGTGGA...GGGTGTGGGGGCCGGGGGCTGGCTTGCTGAAGTCTTCAACTTGCACTCGGAGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp GGAGAACGGAGCACAGTTCCTTCCGTGCCTCCTGCCGGCGCTGCTCAAGGTGTGTGGCTGATGGTGACATaGTGCAGCCTGGTCACATCA +
Preference number: 4 (lower is better)
Translates to: GERSTVPSVPPAGAAQGVWLMVT*CSLVTS
Trigger: TGATGTGACCAGGCTGCAGCATGTCACCATCAGCCA...CACACCTTGAGCAGCGCCGGCAGGAGGCACGGAAGGAACTGTGCTCCGTTCTCC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp AGCTCCGAGTGCAAGTTGAAGACTTCAGCAAGCCAGCCCCCGGCCCCCACACCCCATCCAAAGATCTCTTaGCCAGGGCGGAGTATCTGG +
Preference number: 4 (lower is better)
Translates to: SSECKLKTSASQPPAPTPHPKIS*PGRSIW
Trigger: CCAGATACTCCGCCCTGGGCAAGAGATCTTTGGATG...GGGTGTGGGGGCCGGGGGCTGGCTTGCTGAAGTCTTCAACTTGCACTCGGAGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp GGAGAACGGAGCACAGTTCCTTCCGTGCCTCCTGCCGGCGCTGCTCAAGGTGTGCTTGGGCAGTCCTTCTaGGTCTGTGATGTACTGAGC +
Preference number: 4 (lower is better)
Translates to: GERSTVPSVPPAGAAQGVLGQSF*VCDVLS
Trigger: GCTCAGTACATCACAGACGCAGAAGGACTGCCCAAG...CACACCTTGAGCAGCGCCGGCAGGAGGCACGGAAGGAACTGTGCTCCGTTCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp AGCTCCGAGTGCAAGTTGAAGACTTCAGCAAGCCAGCCCCCGGCCCCCACACCCTTGTCAGCATCTCCGTaGAGGCCATTGCGGCAAATG +
Preference number: 4 (lower is better)
Translates to: SSECKLKTSASQPPAPTPLSASP*RPLRQM
Trigger: CATTTGCCGCAATGGCCTGCACGGAGATGCTGACAA...GGGTGTGGGGGCCGGGGGCTGGCTTGCTGAAGTCTTCAACTTGCACTCGGAGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp GGGCAGCCGTGGCCAGCAGGGAGCTTCCTCATGTGGCATTGCCTGCGAGACTGTACTGGCTGCAGAACTTaGGGGTTTCCTCCTTGGAGA +
Preference number: 4 (lower is better)
Translates to: GQPWPAGSFLMWHCLRDCTGCRT*GFPPWR
Trigger: TCTCCAAGGAGGAAACCCCCAAGTTCTGCAGCCAGT...ACAGTCTCGCAGGCAATGCCACATGAGGAAGCTCCCTGCTGGCCACGGCTGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319921.4
CDS-3UTR CCA 90 bp AGCTCCGAGTGCAAGTTGAAGACTTCAGCAAGCCAGCCCCCGGCCCCCACACCCACTGGCTGCAGAACTTaGGGGTTTCCTCCTTGGAGA +
Preference number: 4 (lower is better)
Translates to: SSECKLKTSASQPPAPTPTGCRT*GFPPWR
Trigger: TCTCCAAGGAGGAAACCCCCAAGTTCTGCAGCCAGT...GGGTGTGGGGGCCGGGGGCTGGCTTGCTGAAGTCTTCAACTTGCACTCGGAGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp TCGGCTTTCAAAAAGCTGTCAGCTCAGGTAGCACGCCTTGGTCTTGAATTCGGTGGGGGCTGGCTCGGCTaGCCAGTGGGGCCACTCTGC +
Preference number: 4 (lower is better)
Translates to: SAFKKLSAQVARLGLEFGGGWLG*PVGPLC
Trigger: GCAGAGTGGCCCCACTGGCCAGCCGAGCCAGCCCCC...ACCGAATTCAAGACCAAGGCGTGCTACCTGAGCTGACAGCTTTTTGAAAGCCGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp CACGCCGCAGACGAGGAGAGAGGAGTCTTCTCTCCAAAGTCATCCAAAGATAGCGCCGTCACCCTCCAGTaGCGTGGTGGCTGTGCCTGG +
Preference number: 4 (lower is better)
Translates to: HAADEERGVFSPKSSKDSAVTLQ*RGGCAW
Trigger: CCAGGCACAGCCACCACGCCACTGGAGGGTGACGGC...GCTATCTTTGGATGACTTTGGAGAGAAGACTCCTCTCTCCTCGTCTGCGGCGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp CAGATCTCGGTGGCAGGTGGCTCTGCACAGTCCAGAGTGATAAAACAATCACAGGGACCGGTCCCCTCCTaGGACAGGCCTCTGCCCCCA +
Preference number: 4 (lower is better)
Translates to: QISVAGGSAQSRVIKQSQGPVPS*DRPLPP
Trigger: TGGGGGCAGAGGCCTGTCCCAGGAGGGGACCGGTCC...CTGTGATTGTTTTATCACTCTGGACTGTGCAGAGCCACCTGCCACCGAGATCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp AGCTCCGAGTGCAAGTTGAAGACTTCAGCAAGCCAGCCCCCGGCCCCCACACCCTCTCGTCCTTGGTCTTaGTCTCAGCTTCCTGGCAGT +
Preference number: 4 (lower is better)
Translates to: SSECKLKTSASQPPAPTPSRPWS*SQLPGS
Trigger: ACTGCCAGGAAGCTGAGACCAAGACCAAGGACGAGA...GGGTGTGGGGGCCGGGGGCTGGCTTGCTGAAGTCTTCAACTTGCACTCGGAGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp GCAAATCTGTCAACCCAGCTCAACTGTCATAGCTGTCCTGTTCCAGCCACTGGTGCGGGCGGCCGGGCTTaGAGAGGCCCTGCACGAACT +
Preference number: 4 (lower is better)
Translates to: ANLSTQLNCHSCPVPATGAGGRA*RGPART
Trigger: AGTTCGTGCAGGGCCTCTCCAAGCCCGGCCGCCCGC...ACCAGTGGCTGGAACAGGACAGCTATGACAGTTGAGCTGGGTTGACAGATTTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573038.1
CDS-3UTR CCA 90 bp CAGATCTCGGTGGCAGGTGGCTCTGCACAGTCCAGAGTGATAAAACAATCACAGGCGGGCGGCCGGGCTTaGAGAGGCCCTGCACGAACT +
Preference number: 4 (lower is better)
Translates to: QISVAGGSAQSRVIKQSQAGGRA*RGPART
Trigger: AGTTCGTGCAGGGCCTCTCCAAGCCCGGCCGCCCGC...CTGTGATTGTTTTATCACTCTGGACTGTGCAGAGCCACCTGCCACCGAGATCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp AGAGGTGTAAGCGTTTCAGTCCCAGATCGGCTACAGGGAGTGGCGCTCAGCTCCAGGTACCTATCCATCTaGCCTGGGTGGTCCTGCCGC +
Preference number: 4 (lower is better)
Translates to: RGVSVSVPDRLQGVALSSRYLSI*PGWSCR
Trigger: GCGGCAGGACCACCCAGGCCAGATGGATAGGTACCT...GGAGCTGAGCGCCACTCCCTGTAGCCGATCTGGGACTGAAACGCTTACACCTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR CCA 90 bp GGAGAACGGAGCACAGTTCCTTCCGTGCCTCCTGCCGGCGCTGCTCAAGGTGTGCAATCTCTTTGGTCCTaGTGGTCCACGGTGCACATG +
Preference number: 4 (lower is better)
Translates to: GERSTVPSVPPAGAAQGVQSLWS*WSTVHM
Trigger: CATGTGCACCGTGGACCACCAGGACCAAAGAGATTG...CACACCTTGAGCAGCGCCGGCAGGAGGCACGGAAGGAACTGTGCTCCGTTCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp GGAGAACGGAGCACAGTTCCTTCCGTGCCTCCTGCCGGCGCTGCTCAAGGTGTGAGCTCCTGGTTGATCTaGTCCAGTGTTTCACGGCGA +
Preference number: 4 (lower is better)
Translates to: GERSTVPSVPPAGAAQGVSSWLI*SSVSRR
Trigger: TCGCCGTGAAACACTGGACCAGATCAACCAGGAGCT...CACACCTTGAGCAGCGCCGGCAGGAGGCACGGAAGGAACTGTGCTCCGTTCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp AGCTCCGAGTGCAAGTTGAAGACTTCAGCAAGCCAGCCCCCGGCCCCCACACCCGCCTGGATGAGCTCCTaGTTGATCTGGTCCAGTGTT +
Preference number: 4 (lower is better)
Translates to: SSECKLKTSASQPPAPTPAWMSS*LIWSSV
Trigger: AACACTGGACCAGATCAACCAGGAGCTCATCCAGGC...GGGTGTGGGGGCCGGGGGCTGGCTTGCTGAAGTCTTCAACTTGCACTCGGAGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp TCAGCAAGCCAGCCCCCGGCCCCCACACCCGTTCATAGGCAGTCGGAATGCAGATTCCTGGGCAGGTACTaGTCCTTATCCAGAGCCTTC +
Preference number: 4 (lower is better)
Translates to: SASQPPAPTPVHRQSECRFLGRY*SLSRAF
Trigger: GAAGGCTCTGGATAAGGACCAGTACCTGCCCAGGAA...TCTGCATTCCGACTGCCTATGAACGGGTGTGGGGGCCGGGGGCTGGCTTGCTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp GCACCAGTCCATGATCAAGTCCACGCCGCAGACGAGGAGAGAGGAGTCTTCTCTGCACCTCATCGTAAGTaGGCAGGGGCTGGCTTGGGG +
Preference number: 4 (lower is better)
Translates to: APVHDQVHAADEERGVFSAPHRK*AGAGLG
Trigger: CCCCAAGCCAGCCCCTGCCCACTTACGATGAGGTGC...AGAGAAGACTCCTCTCTCCTCGTCTGCGGCGTGGACTTGATCATGGACTGGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp CACTGGTGGCACCATGACAGTGAGGAGAACGGAGCACAGTTCCTTCCGTGCCTCATCGGCTACAGGGAGTaGCGCTCAGCTCCACTGTGG +
Preference number: 4 (lower is better)
Translates to: HWWHHDSEENGAQFLPCLIGYRE*RSAPLW
Trigger: CCACAGTGGAGCTGAGCGCCACTCCCTGTAGCCGAT...GAGGCACGGAAGGAACTGTGCTCCGTTCTCCTCACTGTCATGGTGCCACCAGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR TCA 90 bp GGGCAGCCGTGGCCAGCAGGGAGCTTCCTCATGTGGCATTGCCTGCGAGACTGTACATGTCCTGTCACGTaGCCACGGCTTCAGTTTCAT +
Preference number: 4 (lower is better)
Translates to: GQPWPAGSFLMWHCLRDCTCPVT*PRLQFH
Trigger: ATGAAACTGAAGCCGTGGTCACGTGACAGGACATGT...ACAGTCTCGCAGGCAATGCCACATGAGGAAGCTCCCTGCTGGCCACGGCTGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319921.4
CDS-3UTR TCA 90 bp ACAGTGATGACAGGGCCATCTGAGGAACGGCCTGCAAGCCCGTGTGACTTGTGCCAAGGAAGCCAGCTCTaGGGAAGCGGACTTGTTCCC +
Preference number: 4 (lower is better)
Translates to: TVMTGPSEERPASPCDLCQGSQL*GSGLVP
Trigger: GGGAACAAGTCCGCTTCCTCAGAGCTGGCTTCCTTG...GCACAAGTCACACGGGCTTGCAGGCCGTTCCTCAGATGGCCCTGTCATCACTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319921.4
CDS-3UTR TCA 90 bp CACGCCGCAGACGAGGAGAGAGGAGTCTTCTCTCCAAAGTCATCCAAAGATAGCTCCCCCGCTGGCTGCTaGGCTTCCGCACCAGGTACA +
Preference number: 4 (lower is better)
Translates to: HAADEERGVFSPKSSKDSSPAGC*ASAPGT
Trigger: TGTACCTGGTGCGGAAGCTCAGCAGCCAGCGGGGGA...GCTATCTTTGGATGACTTTGGAGAGAAGACTCCTCTCTCCTCGTCTGCGGCGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp AGCTCCGAGTGCAAGTTGAAGACTTCAGCAAGCCAGCCCCCGGCCCCCACACCCGCTGATATCAGGAGGTaGAAGGATCTTGCATTCGCC +
Preference number: 4 (lower is better)
Translates to: SSECKLKTSASQPPAPTPADIRR*KDLAFA
Trigger: GGCGAATGCAAGATCCTTTCACCTCCTGATATCAGC...GGGTGTGGGGGCCGGGGGCTGGCTTGCTGAAGTCTTCAACTTGCACTCGGAGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp GGGGTGGGCAGTGCCAGAGGCGAACGGGCACAGGTCATTACTGCGTGTGTGGCTTCAGAAACCCCAGAGTaGCTTCTACGACAGACAGCA +
Preference number: 4 (lower is better)
Translates to: GVGSARGERAQVITACVASETPE*LLRQTA
Trigger: TGCTGTCTGTCGTAGAAGTCACTCTGGGGTTTCTGA...AGCCACACACGCAGTAATGACCTGTGCCCGTTCGCCTCTGGCACTGCCCACCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp ATCAAGTCCACGCCGCAGACGAGGAGAGAGGAGTCTTCTCTCCAAAGTCATCCATCTCTCAGGCTCCACTaGGGGCGGAAGCGCTCCTCG +
Preference number: 4 (lower is better)
Translates to: IKSTPQTRREESSLQSHPSLRLH*GRKRSS
Trigger: CGAGGAGCGCTTCCGCCCTCAGTGGAGCCTGAGAGA...TGGATGACTTTGGAGAGAAGACTCCTCTCTCCTCGTCTGCGGCGTGGACTTGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp GCACGCCTTGGTCTTGAATTCGGTGCTACGCTGACAGCTCTCCTTCTGAATGCATCTCTCAGGCTCCACTaGGGGCGGAAGCGCTCCTCG +
Preference number: 4 (lower is better)
Translates to: ARLGLEFGATLTALLLNASLRLH*GRKRSS
Trigger: CGAGGAGCGCTTCCGCCCTCAGTGGAGCCTGAGAGA...TGCATTCAGAAGGAGAGCTGTCAGCGTAGCACCGAATTCAAGACCAAGGCGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp GGGGTGGGCAGTGCCAGAGGCGAACGGGCACAGGTCATTACTGCGTGTGTGGCTCAAGGTGTGCATGGCTaGGTCCTGGACAAGCATTTT +
Preference number: 4 (lower is better)
Translates to: GVGSARGERAQVITACVAQGVHG*VLDKHF
Trigger: AAAATGCTTGTCCAGGACTCAGCCATGCACACCTTG...AGCCACACACGCAGTAATGACCTGTGCCCGTTCGCCTCTGGCACTGCCCACCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp CACGCCGCAGACGAGGAGAGAGGAGTCTTCTCTCCAAAGTCATCCAAAGATAGCCCCATCCCTGCCAGGTaGGCCAGACAGTGGCCAAGG +
Preference number: 4 (lower is better)
Translates to: HAADEERGVFSPKSSKDSPIPAR*ARQWPR
Trigger: CCTTGGCCACTGTCTGGCTCACCTGGCAGGGATGGG...GCTATCTTTGGATGACTTTGGAGAGAAGACTCCTCTCTCCTCGTCTGCGGCGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp GGGGTGGGCAGTGCCAGAGGCGAACGGGCACAGGTCATTACTGCGTGTGTGGCTTGCAGACGACCATCATaGAGACGTTCTCCTTCAAGG +
Preference number: 4 (lower is better)
Translates to: GVGSARGERAQVITACVACRRPS*RRSPSR
Trigger: CCTTGAAGGAGAACGTCTTCATGATGGTCGTCTGCA...AGCCACACACGCAGTAATGACCTGTGCCCGTTCGCCTCTGGCACTGCCCACCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp GCACGCCTTGGTCTTGAATTCGGTGCTACGCTGACAGCTCTCCTTCTGAATGCAGCTGCGGAAGAGATCTaGGTAGGCAGCCGGGCCCTG +
Preference number: 4 (lower is better)
Translates to: ARLGLEFGATLTALLLNAAAEEI*VGSRAL
Trigger: CAGGGCCCGGCTGCCTACTCAGATCTCTTCCGCAGC...TGCATTCAGAAGGAGAGCTGTCAGCGTAGCACCGAATTCAAGACCAAGGCGTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp TTTCAGGCAGGGCATGGGGGACTCCTTCTGAGGCAGAGGTGTAAGCGTTTCAGTGGGGCTGACTTCCTCTaGGCACTTGGCCTCGGGCAA +
Preference number: 4 (lower is better)
Translates to: FQAGHGGLLLRQRCKRFSGADFL*ALGLGQ
Trigger: TTGCCCGAGGCCAAGTGCTCAGAGGAAGTCAGCCCC...ACTGAAACGCTTACACCTCTGCCTCAGAAGGAGTCCCCCATGCCCTGCCTGAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR TCA 90 bp CGGGGGCCTGCTACACACTGCTCTGGCCAGGCATTCCACTGGGGCAATTGCCTGAACAGAATACTTAGCTaGGGCAATGAGCTGGGCGCT +
Preference number: 4 (lower is better)
Translates to: RGPATHCSGQAFHWGNCLNRILS*GNELGA
Trigger: AGCGCCCAGCTCATTGCCTCAGCTAAGTATTCTGTT...CAGGCAATTGCCCCAGTGGAATGCCTGGCCAGAGCAGTGTGTAGCAGGCCCCCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR TCA 90 bp TCCTGTTCCAGCCACTGGTTCACGCACACTAGCCAGGTGCGCCCTGGAGGCTGTCAATACAGTGTCACGTaGTGGGCTGCATCAGTGGTC +
Preference number: 4 (lower is better)
Translates to: SCSSHWFTHTSQVRPGGCQYSVT*WAASVV
Trigger: GACCACTGATGCAGCCCATCACGTGACACTGTATTG...ACAGCCTCCAGGGCGCACCTGGCTAGTGTGCGTGAACCAGTGGCTGGAACAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573038.1
CDS-3UTR GCA 90 bp AGCTCCGAGTGCAAGTTGAAGACTTCAGCAAGCCAGCCCCCGGCCCCCACACCCGAGTCGCTGGCAGCCTaGTATATACTACATGTCCTG +
Preference number: 4 (lower is better)
Translates to: SSECKLKTSASQPPAPTPESLAA*YILHVL
Trigger: CAGGACATGTAGTATATAGCAGGCTGCCAGCGACTC...GGGTGTGGGGGCCGGGGGCTGGCTTGCTGAAGTCTTCAACTTGCACTCGGAGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp GGGCAGCCGTGGCCAGCAGGGAGCTTCCTCATGTGGCATTGCCTGCGAGACTGTATTGTTCTCAGAATCTaGTATGGGGGCTGCAGGAGG +
Preference number: 4 (lower is better)
Translates to: GQPWPAGSFLMWHCLRDCIVLRI*YGGCRR
Trigger: CCTCCTGCAGCCCCCATAGCAGATTCTGAGAACAAT...ACAGTCTCGCAGGCAATGCCACATGAGGAAGCTCCCTGCTGGCCACGGCTGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000319921.4
CDS-3UTR GCA 90 bp GGAGAACGGAGCACAGTTCCTTCCGTGCCTCCTGCCGGCGCTGCTCAAGGTGTGATTGTTCTCAGAATCTaGTATGGGGGCTGCAGGAGG +
Preference number: 4 (lower is better)
Translates to: GERSTVPSVPPAGAAQGVIVLRI*YGGCRR
Trigger: CCTCCTGCAGCCCCCATAGCAGATTCTGAGAACAAT...CACACCTTGAGCAGCGCCGGCAGGAGGCACGGAAGGAACTGTGCTCCGTTCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp GGAATGCAGATCTCGGTGGCAGGTGGCTCTGCACAGTCCAGAGTGATAAAACAACCCAAAGCCTGGGCCTaGAGGGGGCTGTCGCCAACC +
Preference number: 4 (lower is better)
Translates to: GMQISVAGGSAQSRVIKQPKAWA*RGLSPT
Trigger: GGTTGGCGACAGCCCCCTGCAGGCCCAGGCTTTGGG...TTGTTTTATCACTCTGGACTGTGCAGAGCCACCTGCCACCGAGATCTGCATTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp GCACCAGTCCATGATCAAGTCCACGCCGCAGACGAGGAGAGAGGAGTCTTCTCTGAGGCCCCTGCCTGTTaGTCGGTGGTCTGCAGTTCT +
Preference number: 4 (lower is better)
Translates to: APVHDQVHAADEERGVFSEAPAC*SVVCSS
Trigger: AGAACTGCAGACCACCGAGCAACAGGCAGGGGCCTC...AGAGAAGACTCCTCTCTCCTCGTCTGCGGCGTGGACTTGATCATGGACTGGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp ACAGTGATGACAGGGCCATCTGAGGAACGGCCTGCAAGCCCGTGTGACTTGTGCCTGAGACCCAGCGGGTaGTTCATAGCCCTTAGCTGG +
Preference number: 4 (lower is better)
Translates to: TVMTGPSEERPASPCDLCLRPSG*FIALSW
Trigger: CCAGCTAAGGGCTATGAAGCACCCGCTGGGTCTCAG...GCACAAGTCACACGGGCTTGCAGGCCGTTCCTCAGATGGCCCTGTCATCACTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319921.4
CDS-3UTR GCA 90 bp ACAGTGATGACAGGGCCATCTGAGGAACGGCCTGCAAGCCCGTGTGACTTGTGCAGATTTCAGCGCCATTaGCCTTGGCGAGGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: TVMTGPSEERPASPCDLCRFQRH*PWRGRR
Trigger: CCTCCTCCCTCGCCAAGGGCAATGGCGCTGAAATCT...GCACAAGTCACACGGGCTTGCAGGCCGTTCCTCAGATGGCCCTGTCATCACTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319921.4
CDS-3UTR GCA 90 bp ACAGTGATGACAGGGCCATCTGAGGAACGGCCTGCAAGCCCGTGTGACTTGTGCGAGCAGCAGGGACTGTaGAGCACACTGAGGAATCCG +
Preference number: 4 (lower is better)
Translates to: TVMTGPSEERPASPCDLCEQQGL*STLRNP
Trigger: CGGATTCCTCAGTGTGCTGCACAGTCCCTGCTGCTC...GCACAAGTCACACGGGCTTGCAGGCCGTTCCTCAGATGGCCCTGTCATCACTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319921.4
CDS-3UTR GCA 90 bp ACAGTGATGACAGGGCCATCTGAGGAACGGCCTGCAAGCCCGTGTGACTTGTGCACACATGCAGGATGGTaGGAGCAGCAGGGACTGTGC +
Preference number: 4 (lower is better)
Translates to: TVMTGPSEERPASPCDLCTHAGW*EQQGLC
Trigger: GCACAGTCCCTGCTGCTCGCACCATCCTGCATGTGT...GCACAAGTCACACGGGCTTGCAGGCCGTTCCTCAGATGGCCCTGTCATCACTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319921.4
CDS-3UTR GCA 90 bp GGGCAGCCGTGGCCAGCAGGGAGCTTCCTCATGTGGCATTGCCTGCGAGACTGTGCAATTGTTTATGCCTaGAGAGGGGAGTGGGTGACT +
Preference number: 4 (lower is better)
Translates to: GQPWPAGSFLMWHCLRDCAIVYA*RGEWVT
Trigger: AGTCACCCACTCCCCTCTGCAGGCATAAACAATTGC...ACAGTCTCGCAGGCAATGCCACATGAGGAAGCTCCCTGCTGGCCACGGCTGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319921.4
CDS-3UTR GCA 90 bp AGCTCCGAGTGCAAGTTGAAGACTTCAGCAAGCCAGCCCCCGGCCCCCACACCCACACAGAAGGACGGCTaGAGCATGAATGGCCATTTC +
Preference number: 4 (lower is better)
Translates to: SSECKLKTSASQPPAPTPTQKDG*SMNGHF
Trigger: GAAATGGCCATTCATGCTGCAGCCGTCCTTCTGTGT...GGGTGTGGGGGCCGGGGGCTGGCTTGCTGAAGTCTTCAACTTGCACTCGGAGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp TCAGCAAGCCAGCCCCCGGCCCCCACACCCGTTCATAGGCAGTCGGAATGCAGAGGGGAGGGAGTCCTGTaGCATTTTGTTCTTGATGTC +
Preference number: 4 (lower is better)
Translates to: SASQPPAPTPVHRQSECRGEGVL*HFVLDV
Trigger: GACATCAAGAACAAAATGGCACAGGACTCCCTCCCC...TCTGCATTCCGACTGCCTATGAACGGGTGTGGGGGCCGGGGGCTGGCTTGCTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp TTTATGCGTGAGAAAACCAAGGCCCTGATGGTGTCCCTGGTCCAAGTCCAGTGCGCACAGTTCCTTCCGTaGCTCCTGCCGGCGCTGCTC +
Preference number: 4 (lower is better)
Translates to: FMREKTKALMVSLVQVQCAQFLP*LLPALL
Trigger: GAGCAGCGCCGGCAGGAGGCACGGAAGGAACTGTGC...GCACTGGACTTGGACCAGGGACACCATCAGGGCCTTGGTTTTCTCACGCATAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp GGGGTGGGCAGTGCCAGAGGCGAACGGGCACAGGTCATTACTGCGTGTGTGGCTTGTGAAGTCAGTTACTaGCTGCAGTCTGGGTCACTC +
Preference number: 4 (lower is better)
Translates to: GVGSARGERAQVITACVACEVSY*LQSGSL
Trigger: GAGTGACCCAGACTGCAGGCAGTAACTGACTTCACA...AGCCACACACGCAGTAATGACCTGTGCCCGTTCGCCTCTGGCACTGCCCACCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp CACTGGTGGCACCATGACAGTGAGGAGAACGGAGCACAGTTCCTTCCGTGCCTCCAAGATGACCTTGGCTaGGTGGACAGCCTGGTGCAG +
Preference number: 4 (lower is better)
Translates to: HWWHHDSEENGAQFLPCLQDDLG*VDSLVQ
Trigger: CTGCACCAGGCTGTCCACGCAGCCAAGGTCATCTTG...GAGGCACGGAAGGAACTGTGCTCCGTTCTCCTCACTGTCATGGTGCCACCAGTG
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp GGGGTGGGCAGTGCCAGAGGCGAACGGGCACAGGTCATTACTGCGTGTGTGGCTTCTTCTCGGTGCTGCTaGGTGCACAGATTGTGGAAA +
Preference number: 4 (lower is better)
Translates to: GVGSARGERAQVITACVASSRCC*VHRLWK
Trigger: TTTCCACAATCTGTGCACGCAGCAGCACCGAGAAGA...AGCCACACACGCAGTAATGACCTGTGCCCGTTCGCCTCTGGCACTGCCCACCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp CACTGGTGGCACCATGACAGTGAGGAGAACGGAGCACAGTTCCTTCCGTGCCTCGGGCCCAGTTGGAGATaGCCACGAAGCCGACCTTTT +
Preference number: 4 (lower is better)
Translates to: HWWHHDSEENGAQFLPCLGPSWR*PRSRPF
Trigger: AAAAGGTCGGCTTCGTGGGCATCTCCAACTGGGCCC...GAGGCACGGAAGGAACTGTGCTCCGTTCTCCTCACTGTCATGGTGCCACCAGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp GGGGAGTCTAAAACCAGCTGTAACCAAGTGTCTGTGTACGGGAACTGGTGTGGGCGACAGCCACTCCGCTaGGAACCCGCCCAGCGAGTA +
Preference number: 4 (lower is better)
Translates to: GESKTSCNQVSVYGNWCGRQPLR*EPAQRV
Trigger: TACTCGCTGGGCGGGTTCGCAGCGGAGTGGCTGTCG...CCCACACCAGTTCCCGTACACAGACACTTGGTTACAGCTGGTTTTAGACTCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR GCA 90 bp GGAGAACGGAGCACAGTTCCTTCCGTGCCTCCTGCCGGCGCTGCTCAAGGTGTGGGATCGACACATCACTaGCTCCGAGTTCAGAGGTTT +
Preference number: 4 (lower is better)
Translates to: GERSTVPSVPPAGAAQGVGSTHH*LRVQRF
Trigger: AAACCTCTGAACTCGGAGGCAGTGATGTGTCGATCC...CACACCTTGAGCAGCGCCGGCAGGAGGCACGGAAGGAACTGTGCTCCGTTCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp CACTGGTGGCACCATGACAGTGAGGAGAACGGAGCACAGTTCCTTCCGTGCCTCCCACCCTCCGCATATTaGGCGTGCAGCTCTCGTTCT +
Preference number: 4 (lower is better)
Translates to: HWWHHDSEENGAQFLPCLPPSAY*ACSSRS
Trigger: AGAACGAGAGCTGCACGCGCAATATGCGGAGGGTGG...GAGGCACGGAAGGAACTGTGCTCCGTTCTCCTCACTGTCATGGTGCCACCAGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp GCACCAGTCCATGATCAAGTCCACGCCGCAGACGAGGAGAGAGGAGTCTTCTCTAGGCTCCCGCTGCCTTaGATGTGCTCATCGGAGCAG +
Preference number: 4 (lower is better)
Translates to: APVHDQVHAADEERGVFSRLPLP*MCSSEQ
Trigger: CTGCTCCGATGAGCACATGCAAGGCAGCGGGAGCCT...AGAGAAGACTCCTCTCTCCTCGTCTGCGGCGTGGACTTGATCATGGACTGGTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp GGGGAGTCTAAAACCAGCTGTAACCAAGTGTCTGTGTACGGGAACTGGTGTGGGAGGCAGCGCAGGCAGTaGACGTGGTCGCAGGGCAGA +
Preference number: 4 (lower is better)
Translates to: GESKTSCNQVSVYGNWCGRQRRQ*TWSQGR
Trigger: TCTGCCCTGCGACCACGTGCACTGCCTGCGCTGCCT...CCCACACCAGTTCCCGTACACAGACACTTGGTTACAGCTGGTTTTAGACTCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR GCA 90 bp CGGGGGCCTGCTACACACTGCTCTGGCCAGGCATTCCACTGGGGCAATTGCCTGAAGCAGAAAGAACTCTaGAGCAGGGAACTGTCCAGG +
Preference number: 4 (lower is better)
Translates to: RGPATHCSGQAFHWGNCLKQKEL*SRELSR
Trigger: CCTGGACAGTTCCCTGCTGCAGAGTTCTTTCTGCTT...CAGGCAATTGCCCCAGTGGAATGCCTGGCCAGAGCAGTGTGTAGCAGGCCCCCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR CCA 90 bp AGGAGGATGATGGCTAAAGGGGCCGGGTTTCTCTTTGAAGTGATGAAAATGCTCGGGGGCTGGCTCGGCTaGCCAGTGGGGCCACTCTGC +
Preference number: 4 (lower is better)
Translates to: RRMMAKGAGFLFEVMKMLGGWLG*PVGPLC
Trigger: GCAGAGTGGCCCCACTGGCCAGCCGAGCCAGCCCCC...GAGCATTTTCATCACTTCAAAGAGAAACCCGGCCCCTTTAGCCATCATCCTCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000319921.4
CDS-3UTR CCA 90 bp TCGGCTTTCAAAAAGCTGTCAGCTCAGGTAGCACGCCTTGGTCTTGAATTCGGTCCTCCAGTGGCGTGGTaGCTGTGCCTGGGGGCTGGC +
Preference number: 4 (lower is better)
Translates to: SAFKKLSAQVARLGLEFGPPVAW*LCLGAG
Trigger: GCCAGCCCCCAGGCACAGCCACCACGCCACTGGAGG...ACCGAATTCAAGACCAAGGCGTGCTACCTGAGCTGACAGCTTTTTGAAAGCCGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp TCGGCTTTCAAAAAGCTGTCAGCTCAGGTAGCACGCCTTGGTCTTGAATTCGGTGGACCGGTCCCCTCCTaGGACAGGCCTCTGCCCCCA +
Preference number: 4 (lower is better)
Translates to: SAFKKLSAQVARLGLEFGGPVPS*DRPLPP
Trigger: TGGGGGCAGAGGCCTGTCCCAGGAGGGGACCGGTCC...ACCGAATTCAAGACCAAGGCGTGCTACCTGAGCTGACAGCTTTTTGAAAGCCGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp CTGGACTTCCCCTGTGGCCGCAAGGCTGTGCTTGTACAGGGGTTAAGTGTCCAACTGCCTGTTGCTCGGTaGTCTGCAGTTCTGTCCCGG +
Preference number: 4 (lower is better)
Translates to: LDFPCGRKAVLVQGLSVQLPVAR*SAVLSR
Trigger: CCGGGACAGAACTGCAGACCACCGAGCAACAGGCAG...TTGGACACTTAACCCCTGTACAAGCACAGCCTTGCGGCCACAGGGGAAGTCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319921.4
CDS-3UTR CCA 90 bp GGGCAGCCGTGGCCAGCAGGGAGCTTCCTCATGTGGCATTGCCTGCGAGACTGTAGGAGTGGTTGCTGGTaGCTGTTTCATTCTCTGGGT +
Preference number: 4 (lower is better)
Translates to: GQPWPAGSFLMWHCLRDCRSGCW*LFHSLG
Trigger: ACCCAGAGAATGAAACAGCCACCAGCAACCACTCCT...ACAGTCTCGCAGGCAATGCCACATGAGGAAGCTCCCTGCTGGCCACGGCTGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319921.4
CDS-3UTR CCA 90 bp AGCTCCGAGTGCAAGTTGAAGACTTCAGCAAGCCAGCCCCCGGCCCCCACACCCAGGAGTGGTTGCTGGTaGCTGTTTCATTCTCTGGGT +
Preference number: 4 (lower is better)
Translates to: SSECKLKTSASQPPAPTPRSGCW*LFHSLG
Trigger: ACCCAGAGAATGAAACAGCCACCAGCAACCACTCCT...GGGTGTGGGGGCCGGGGGCTGGCTTGCTGAAGTCTTCAACTTGCACTCGGAGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp ATTGTTTATGCCTGCAGAGGGGAGTGGGTGACTAGAGGGGAGGAGGATGATGGCGCTGCCTTGACCTTCTaGGCCCAAGGGAGCCTCCCA +
Preference number: 4 (lower is better)
Translates to: IVYACRGEWVTRGEEDDGAALTF*AQGSLP
Trigger: TGGGAGGCTCCCTTGGGCCCAGAAGGTCAAGGCAGC...GCCATCATCCTCCTCCCCTCTAGTCACCCACTCCCCTCTGCAGGCATAAACAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319921.4
CDS-3UTR CCA 90 bp GCAAATCTGTCAACCCAGCTCAACTGTCATAGCTGTCCTGTTCCAGCCACTGGTTCCATCTGGCCTGGGTaGTCCTGCCGCAGCCCCTGC +
Preference number: 4 (lower is better)
Translates to: ANLSTQLNCHSCPVPATGSIWPG*SCRSPC
Trigger: GCAGGGGCTGCGGCAGGACCACCCAGGCCAGATGGA...ACCAGTGGCTGGAACAGGACAGCTATGACAGTTGAGCTGGGTTGACAGATTTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573038.1
CDS-3UTR CCA 90 bp TTTATGCGTGAGAAAACCAAGGCCCTGATGGTGTCCCTGGTCCAAGTCCAGTGCCCTATCCATCTGGCCTaGGTGGTCCTGCCGCAGCCC +
Preference number: 4 (lower is better)
Translates to: FMREKTKALMVSLVQVQCPIHLA*VVLPQP
Trigger: GGGCTGCGGCAGGACCACCCAGGCCAGATGGATAGG...GCACTGGACTTGGACCAGGGACACCATCAGGGCCTTGGTTTTCTCACGCATAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp TGTCCTGTTCCAGCCACTGGTTCACGCACACTAGCCAGGTGCGCCCTGGAGGCTAGTCTTAATGCCCAGTaGCTTGCACTCGAGGACAGC +
Preference number: 4 (lower is better)
Translates to: CPVPATGSRTLARCALEASLNAQ*LALEDS
Trigger: GCTGTCCTCGAGTGCAAGCCACTGGGCATTAAGACT...AGCCTCCAGGGCGCACCTGGCTAGTGTGCGTGAACCAGTGGCTGGAACAGGACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573038.1
CDS-3UTR CCA 90 bp GGAGAACGGAGCACAGTTCCTTCCGTGCCTCCTGCCGGCGCTGCTCAAGGTGTGACACTGAGACACAGCTaGCGAGCAGTATCTCTTCTG +
Preference number: 4 (lower is better)
Translates to: GERSTVPSVPPAGAAQGVTLRHS*RAVSLL
Trigger: CAGAAGAGATACTGCTCGCCAGCTGTGTCTCAGTGT...CACACCTTGAGCAGCGCCGGCAGGAGGCACGGAAGGAACTGTGCTCCGTTCTCC
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp GGAGAACGGAGCACAGTTCCTTCCGTGCCTCCTGCCGGCGCTGCTCAAGGTGTGTTGATCCAATCTCTTTaGTCCTGGTGGTCCACGGTG +
Preference number: 4 (lower is better)
Translates to: GERSTVPSVPPAGAAQGVLIQSL*SWWSTV
Trigger: CACCGTGGACCACCAGGACCAAAGAGATTGGATCAA...CACACCTTGAGCAGCGCCGGCAGGAGGCACGGAAGGAACTGTGCTCCGTTCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp TCAAGTCCACGCCGCAGACGAGGAGAGAGGAGTCTTCTCTCCAAAGTCATCCAACCCTGCACAGCGTCATaGAAGCAGGCCACCCGGTCC +
Preference number: 4 (lower is better)
Translates to: SSPRRRRGERSLLSKVIQPCTAS*KQATRS
Trigger: GGACCGGGTGGCCTGCTTCCATGACGCTGTGCAGGG...TTGGATGACTTTGGAGAGAAGACTCCTCTCTCCTCGTCTGCGGCGTGGACTTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp GCACGCCTTGGTCTTGAATTCGGTGCTACGCTGACAGCTCTCCTTCTGAATGCACCCTGCACAGCGTCATaGAAGCAGGCCACCCGGTCC +
Preference number: 4 (lower is better)
Translates to: ARLGLEFGATLTALLLNAPCTAS*KQATRS
Trigger: GGACCGGGTGGCCTGCTTCCATGACGCTGTGCAGGG...TGCATTCAGAAGGAGAGCTGTCAGCGTAGCACCGAATTCAAGACCAAGGCGTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp GCACCAGTCCATGATCAAGTCCACGCCGCAGACGAGGAGAGAGGAGTCTTCTCTTCTCGTGACTCCTCGTaGCTGCCAGGGCTCTCAGGA +
Preference number: 4 (lower is better)
Translates to: APVHDQVHAADEERGVFSSRDSS*LPGLSG
Trigger: TCCTGAGAGCCCTGGCAGCCACGAGGAGTCACGAGA...AGAGAAGACTCCTCTCTCCTCGTCTGCGGCGTGGACTTGATCATGGACTGGTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp CAGATCTCGGTGGCAGGTGGCTCTGCACAGTCCAGAGTGATAAAACAATCACAGGACAGCCAGGGCGGCTaGCAACACCTCGGAGTGGCC +
Preference number: 4 (lower is better)
Translates to: QISVAGGSAQSRVIKQSQDSQGG*QHLGVA
Trigger: GGCCACTCCGAGGTGTTGCCAGCCGCCCTGGCTGTC...CTGTGATTGTTTTATCACTCTGGACTGTGCAGAGCCACCTGCCACCGAGATCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp TCAAGTCCACGCCGCAGACGAGGAGAGAGGAGTCTTCTCTCCAAAGTCATCCAAGCCTCGAGGGGTGCCTaGGGGGTGACGAAGACCTTG +
Preference number: 4 (lower is better)
Translates to: SSPRRRRGERSLLSKVIQASRGA*GVTKTL
Trigger: CAAGGTCTTCGTCACCCCCCAGGCACCCCTCGAGGC...TTGGATGACTTTGGAGAGAAGACTCCTCTCTCCTCGTCTGCGGCGTGGACTTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp TTTATGCGTGAGAAAACCAAGGCCCTGATGGTGTCCCTGGTCCAAGTCCAGTGCGCCTCGAGGGGTGCCTaGGGGGTGACGAAGACCTTG +
Preference number: 4 (lower is better)
Translates to: FMREKTKALMVSLVQVQCASRGA*GVTKTL
Trigger: CAAGGTCTTCGTCACCCCCCAGGCACCCCTCGAGGC...GCACTGGACTTGGACCAGGGACACCATCAGGGCCTTGGTTTTCTCACGCATAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp GCACCAGTCCATGATCAAGTCCACGCCGCAGACGAGGAGAGAGGAGTCTTCTCTTTGAAGGGCACCCTCTaGAGCAGCAGGCCCTGGTAC +
Preference number: 4 (lower is better)
Translates to: APVHDQVHAADEERGVFSLKGTL*SSRPWY
Trigger: GTACCAGGGCCTGCTGCTCCAGAGGGTGCCCTTCAA...AGAGAAGACTCCTCTCTCCTCGTCTGCGGCGTGGACTTGATCATGGACTGGTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp GGAGAACGGAGCACAGTTCCTTCCGTGCCTCCTGCCGGCGCTGCTCAAGGTGTGCCAAGTTCTTGGCGATaGTTTTCCTCAGAGGTACGC +
Preference number: 4 (lower is better)
Translates to: GERSTVPSVPPAGAAQGVPSSWR*FSSEVR
Trigger: GCGTACCTCTGAGGAAAACCATCGCCAAGAACTTGG...CACACCTTGAGCAGCGCCGGCAGGAGGCACGGAAGGAACTGTGCTCCGTTCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp GGAGAACGGAGCACAGTTCCTTCCGTGCCTCCTGCCGGCGCTGCTCAAGGTGTGCCGTTTCGTAGGCTTTaGCAAAGGACGCAAAGTACC +
Preference number: 4 (lower is better)
Translates to: GERSTVPSVPPAGAAQGVPFRRL*QRTQST
Trigger: GGTACTTTGCGTCCTTTGCCAAAGCCTACGAAACGG...CACACCTTGAGCAGCGCCGGCAGGAGGCACGGAAGGAACTGTGCTCCGTTCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp GGGGTGGGCAGTGCCAGAGGCGAACGGGCACAGGTCATTACTGCGTGTGTGGCTCCGTTTCGTAGGCTTTaGCAAAGGACGCAAAGTACC +
Preference number: 4 (lower is better)
Translates to: GVGSARGERAQVITACVAPFRRL*QRTQST
Trigger: GGTACTTTGCGTCCTTTGCCAAAGCCTACGAAACGG...AGCCACACACGCAGTAATGACCTGTGCCCGTTCGCCTCTGGCACTGCCCACCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp TCAGCAAGCCAGCCCCCGGCCCCCACACCCGTTCATAGGCAGTCGGAATGCAGATGGCCTCGGGCAAATTaGCCAGAAAGATGTCCAAAG +
Preference number: 4 (lower is better)
Translates to: SASQPPAPTPVHRQSECRWPRAN*PERCPK
Trigger: CTTTGGACATCTTTCTGGCCAATTTGCCCGAGGCCA...TCTGCATTCCGACTGCCTATGAACGGGTGTGGGGGCCGGGGGCTGGCTTGCTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp GGAGAACGGAGCACAGTTCCTTCCGTGCCTCCTGCCGGCGCTGCTCAAGGTGTGTCAGCAGGATCGATTTaGCCTCCTCAGACACCTTCT +
Preference number: 4 (lower is better)
Translates to: GERSTVPSVPPAGAAQGVSAGSI*PPQTPS
Trigger: AGAAGGTGTCTGAGGAGGCCAAATCGATCCTGCTGA...CACACCTTGAGCAGCGCCGGCAGGAGGCACGGAAGGAACTGTGCTCCGTTCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp TTTCAGGCAGGGCATGGGGGACTCCTTCTGAGGCAGAGGTGTAAGCGTTTCAGTTCCATCGCCTCCTCATaGCCGTCTTCCGCCCGGTGT +
Preference number: 4 (lower is better)
Translates to: FQAGHGGLLLRQRCKRFSSIASS*PSSARC
Trigger: ACACCGGGCGGAAGACGGCCATGAGGAGGCGATGGA...ACTGAAACGCTTACACCTCTGCCTCAGAAGGAGTCCCCCATGCCCTGCCTGAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR TCA 90 bp ATTGTTTATGCCTGCAGAGGGGAGTGGGTGACTAGAGGGGAGGAGGATGATGGCAATTGCGGGCTGCTCTaGGCCTCACTTCCTGTGGCC +
Preference number: 4 (lower is better)
Translates to: IVYACRGEWVTRGEEDDGNCGLL*ASLPVA
Trigger: GGCCACAGGAAGTGAGGCTCAGAGCAGCCCGCAATT...GCCATCATCCTCCTCCCCTCTAGTCACCCACTCCCCTCTGCAGGCATAAACAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319921.4
CDS-3UTR TCA 90 bp ATTGTTTATGCCTGCAGAGGGGAGTGGGTGACTAGAGGGGAGGAGGATGATGGCAACTGCCATAGAGGCTaGGGCCCCTGCCTGTTGCTC +
Preference number: 4 (lower is better)
Translates to: IVYACRGEWVTRGEEDDGNCHRG*GPCLLL
Trigger: GAGCAACAGGCAGGGGCCTCAGCCTCTATGGCAGTT...GCCATCATCCTCCTCCCCTCTAGTCACCCACTCCCCTCTGCAGGCATAAACAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000319921.4
CDS-3UTR TCA 90 bp CTGGACTTCCCCTGTGGCCGCAAGGCTGTGCTTGTACAGGGGTTAAGTGTCCAATACAGCCGCCAGCTCTaGGGTATCCCAAGGATGTGG +
Preference number: 4 (lower is better)
Translates to: LDFPCGRKAVLVQGLSVQYSRQL*GIPRMW
Trigger: CCACATCCTTGGGATACCTCAGAGCTGGCGGCTGTA...TTGGACACTTAACCCCTGTACAAGCACAGCCTTGCGGCCACAGGGGAAGTCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319921.4
CDS-3UTR TCA 90 bp GGGCAGCCGTGGCCAGCAGGGAGCTTCCTCATGTGGCATTGCCTGCGAGACTGTCCGGTAGTAAATCCCTaGAAGACAGTCCAGGATATG +
Preference number: 4 (lower is better)
Translates to: GQPWPAGSFLMWHCLRDCPVVNP*KTVQDM
Trigger: CATATCCTGGACTGTCTTTCAGGGATTTACTACCGG...ACAGTCTCGCAGGCAATGCCACATGAGGAAGCTCCCTGCTGGCCACGGCTGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319921.4
CDS-3UTR TCA 90 bp ACAGTGATGACAGGGCCATCTGAGGAACGGCCTGCAAGCCCGTGTGACTTGTGCGGGGTTCCTCCTTTGTaGGCCTCCATTCCATGTCTC +
Preference number: 4 (lower is better)
Translates to: TVMTGPSEERPASPCDLCGVPPL*ASIPCL
Trigger: GAGACATGGAATGGAGGCTCACAAAGGAGGAACCCC...GCACAAGTCACACGGGCTTGCAGGCCGTTCCTCAGATGGCCCTGTCATCACTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319921.4
CDS-3UTR TCA 90 bp TCAGCAAGCCAGCCCCCGGCCCCCACACCCGTTCATAGGCAGTCGGAATGCAGAAAGGCAACACGTCAGTaGGAAAAGCAGCACAAGATC +
Preference number: 4 (lower is better)
Translates to: SASQPPAPTPVHRQSECRKATRQ*EKQHKI
Trigger: GATCTTGTGCTGCTTTTCTCACTGACGTGTTGCCTT...TCTGCATTCCGACTGCCTATGAACGGGTGTGGGGGCCGGGGGCTGGCTTGCTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp CACGCCGCAGACGAGGAGAGAGGAGTCTTCTCTCCAAAGTCATCCAAAGATAGCGTCATTCTCCCCCGCTaGGATGGAGGCCAGGTCCAC +
Preference number: 4 (lower is better)
Translates to: HAADEERGVFSPKSSKDSVILPR*DGGQVH
Trigger: GTGGACCTGGCCTCCATCTCAGCGGGGGAGAATGAC...GCTATCTTTGGATGACTTTGGAGAGAAGACTCCTCTCTCCTCGTCTGCGGCGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp TTTATGCGTGAGAAAACCAAGGCCCTGATGGTGTCCCTGGTCCAAGTCCAGTGCGGCCAGGGTCAGGGATaGGCGTTCCACAGACCCATG +
Preference number: 4 (lower is better)
Translates to: FMREKTKALMVSLVQVQCGQGQG*AFHRPM
Trigger: CATGGGTCTGTGGAACGCTCATCCCTGACCCTGGCC...GCACTGGACTTGGACCAGGGACACCATCAGGGCCTTGGTTTTCTCACGCATAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp GCACCAGTCCATGATCAAGTCCACGCCGCAGACGAGGAGAGAGGAGTCTTCTCTAGATGCCTCTTTGGTTaGTGGCCGTGGCCAGGGTCA +
Preference number: 4 (lower is better)
Translates to: APVHDQVHAADEERGVFSRCLFG*WPWPGS
Trigger: TGACCCTGGCCACGGCCATCAACCAAAGAGGCATCT...AGAGAAGACTCCTCTCTCCTCGTCTGCGGCGTGGACTTGATCATGGACTGGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp ATCAAGTCCACGCCGCAGACGAGGAGAGAGGAGTCTTCTCTCCAAAGTCATCCAACGTGTACGCAGCGCTaGAGAGCTCCTCGACGGCAC +
Preference number: 4 (lower is better)
Translates to: IKSTPQTRREESSLQSHPTCTQR*RAPRRH
Trigger: GTGCCGTCGAGGAGCTCTTCAGCGCTGCGTACACGT...TGGATGACTTTGGAGAGAAGACTCCTCTCTCCTCGTCTGCGGCGTGGACTTGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp CACGCCGCAGACGAGGAGAGAGGAGTCTTCTCTCCAAAGTCATCCAAAGATAGCACGTGTACGCAGCGCTaGAGAGCTCCTCGACGGCAC +
Preference number: 4 (lower is better)
Translates to: HAADEERGVFSPKSSKDSTCTQR*RAPRRH
Trigger: GTGCCGTCGAGGAGCTCTTCAGCGCTGCGTACACGT...GCTATCTTTGGATGACTTTGGAGAGAAGACTCCTCTCTCCTCGTCTGCGGCGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp GGGGTGGGCAGTGCCAGAGGCGAACGGGCACAGGTCATTACTGCGTGTGTGGCTAGGCCTCACAATCTCTaGGCTGATAATTCAGGAACC +
Preference number: 4 (lower is better)
Translates to: GVGSARGERAQVITACVARPHNL*ADNSGT
Trigger: GGTTCCTGAATTATCAGCTCAGAGATTGTGAGGCCT...AGCCACACACGCAGTAATGACCTGTGCCCGTTCGCCTCTGGCACTGCCCACCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp AGCTCCGAGTGCAAGTTGAAGACTTCAGCAAGCCAGCCCCCGGCCCCCACACCCAGGCCTCACAATCTCTaGGCTGATAATTCAGGAACC +
Preference number: 4 (lower is better)
Translates to: SSECKLKTSASQPPAPTPRPHNL*ADNSGT
Trigger: GGTTCCTGAATTATCAGCTCAGAGATTGTGAGGCCT...GGGTGTGGGGGCCGGGGGCTGGCTTGCTGAAGTCTTCAACTTGCACTCGGAGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp CACTGGTGGCACCATGACAGTGAGGAGAACGGAGCACAGTTCCTTCCGTGCCTCCATCGACACTGCCGTTaGTGTTGGGCTGCAGATGGA +
Preference number: 4 (lower is better)
Translates to: HWWHHDSEENGAQFLPCLHRHCR*CWAADG
Trigger: TCCATCTGCAGCCCAACATCAACGGCAGTGTCGATG...GAGGCACGGAAGGAACTGTGCTCCGTTCTCCTCACTGTCATGGTGCCACCAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp GGAGAACGGAGCACAGTTCCTTCCGTGCCTCCTGCCGGCGCTGCTCAAGGTGTGTCTCCAGCACCGTGTTaGTATCCAGATAGTGCTTCT +
Preference number: 4 (lower is better)
Translates to: GERSTVPSVPPAGAAQGVSPAPC*YPDSAS
Trigger: AGAAGCACTATCTGGATATCAACACGGTGCTGGAGA...CACACCTTGAGCAGCGCCGGCAGGAGGCACGGAAGGAACTGTGCTCCGTTCTCC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp TTTCAGGCAGGGCATGGGGGACTCCTTCTGAGGCAGAGGTGTAAGCGTTTCAGTGCGTCTGTGATGTACTaGGCCTGGACCCACAGCTCC +
Preference number: 4 (lower is better)
Translates to: FQAGHGGLLLRQRCKRFSASVMY*AWTHSS
Trigger: GGAGCTGTGGGTCCAGGCTCAGTACATCACAGACGC...ACTGAAACGCTTACACCTCTGCCTCAGAAGGAGTCCCCCATGCCCTGCCTGAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR TCA 90 bp GCACCAGTCCATGATCAAGTCCACGCCGCAGACGAGGAGAGAGGAGTCTTCTCTGTCCTTCTGCGTCTGTaGTGTACTGAGCCTGGACCC +
Preference number: 4 (lower is better)
Translates to: APVHDQVHAADEERGVFSVLLRL*CTEPGP
Trigger: GGGTCCAGGCTCAGTACATCACAGACGCAGAAGGAC...AGAGAAGACTCCTCTCTCCTCGTCTGCGGCGTGGACTTGATCATGGACTGGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp AGCTCCGAGTGCAAGTTGAAGACTTCAGCAAGCCAGCCCCCGGCCCCCACACCCACATACAGGAGTAACTaGAATAGCTCAGGGCCGTCT +
Preference number: 4 (lower is better)
Translates to: SSECKLKTSASQPPAPTPTYRSN*NSSGPS
Trigger: AGACGGCCCTGAGCTATTTCAGTTACTCCTGTATGT...GGGTGTGGGGGCCGGGGGCTGGCTTGCTGAAGTCTTCAACTTGCACTCGGAGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR TCA 90 bp TTTCAGGCAGGGCATGGGGGACTCCTTCTGAGGCAGAGGTGTAAGCGTTTCAGTGGGCAATTGCCTGCCTaGGAGCGCTCTCAGGATCCA +
Preference number: 4 (lower is better)
Translates to: FQAGHGGLLLRQRCKRFSGQLPA*ERSQDP
Trigger: TGGATCCTGAGAGCGCTCTCAGGCAGGCAATTGCCC...ACTGAAACGCTTACACCTCTGCCTCAGAAGGAGTCCCCCATGCCCTGCCTGAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR GCA 90 bp GCACCAGTCCATGATCAAGTCCACGCCGCAGACGAGGAGAGAGGAGTCTTCTCTTTCAGTTTCATTTTCTaGGGCCCCCGAGCTCGCCGC +
Preference number: 4 (lower is better)
Translates to: APVHDQVHAADEERGVFSFSFIF*GPRARR
Trigger: GCGGCGAGCTCGGGGGCCGCAGAAAATGAAACTGAA...AGAGAAGACTCCTCTCTCCTCGTCTGCGGCGTGGACTTGATCATGGACTGGTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp GCACCAGTCCATGATCAAGTCCACGCCGCAGACGAGGAGAGAGGAGTCTTCTCTACACTCCATGGGTCCTaGTGGGACTGCCCTGCAGAT +
Preference number: 4 (lower is better)
Translates to: APVHDQVHAADEERGVFSTLHGS*WDCPAD
Trigger: ATCTGCAGGGCAGTCCCAGCAGGACCCATGGAGTGT...AGAGAAGACTCCTCTCTCCTCGTCTGCGGCGTGGACTTGATCATGGACTGGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp GCACCAGTCCATGATCAAGTCCACGCCGCAGACGAGGAGAGAGGAGTCTTCTCTTGTTGCTCGGTGGTCTaGAGTTCTGTCCCGGGCTCA +
Preference number: 4 (lower is better)
Translates to: APVHDQVHAADEERGVFSCCSVV*SSVPGS
Trigger: TGAGCCCGGGACAGAACTGCAGACCACCGAGCAACA...AGAGAAGACTCCTCTCTCCTCGTCTGCGGCGTGGACTTGATCATGGACTGGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp CGGGGGCCTGCTACACACTGCTCTGGCCAGGCATTCCACTGGGGCAATTGCCTGGCAGCTCACAGATATTaGTGTCCCATTTTGACTCCC +
Preference number: 4 (lower is better)
Translates to: RGPATHCSGQAFHWGNCLAAHRY*CPILTP
Trigger: GGGAGTCAAAATGGGACAGCAATATCTGTGAGCTGC...CAGGCAATTGCCCCAGTGGAATGCCTGGCCAGAGCAGTGTGTAGCAGGCCCCCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR GCA 90 bp GCACGCCTTGGTCTTGAATTCGGTGCTACGCTGACAGCTCTCCTTCTGAATGCACTCCAGGCATCCTTGTaGCGCGGGGCCAGCTCCATA +
Preference number: 4 (lower is better)
Translates to: ARLGLEFGATLTALLLNALQASL*RGASSI
Trigger: TATGGAGCTGGCCCCGCGGCACAAGGATGCCTGGAG...TGCATTCAGAAGGAGAGCTGTCAGCGTAGCACCGAATTCAAGACCAAGGCGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp CGGGGGCCTGCTACACACTGCTCTGGCCAGGCATTCCACTGGGGCAATTGCCTGAGAGAGGCTCGTCTATaGTCAGCAAATGCTGCTTCT +
Preference number: 4 (lower is better)
Translates to: RGPATHCSGQAFHWGNCLREARL*SANAAS
Trigger: AGAAGCAGCATTTGCTGAGCATAGACGAGCCTCTCT...CAGGCAATTGCCCCAGTGGAATGCCTGGCCAGAGCAGTGTGTAGCAGGCCCCCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR GCA 90 bp GGGCAGCCGTGGCCAGCAGGGAGCTTCCTCATGTGGCATTGCCTGCGAGACTGTTTCAGCAATTGTTTATaGCTGCAGAGGGGAGTGGGT +
Preference number: 4 (lower is better)
Translates to: GQPWPAGSFLMWHCLRDCFSNCL*LQRGVG
Trigger: ACCCACTCCCCTCTGCAGGCATAAACAATTGCTGAA...ACAGTCTCGCAGGCAATGCCACATGAGGAAGCTCCCTGCTGGCCACGGCTGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319921.4
CDS-3UTR GCA 90 bp GCACCAGTCCATGATCAAGTCCACGCCGCAGACGAGGAGAGAGGAGTCTTCTCTATCCGGGCCACCTCTTaGAGGTATTCAACCGAGGCC +
Preference number: 4 (lower is better)
Translates to: APVHDQVHAADEERGVFSIRATS*RYSTEA
Trigger: GGCCTCGGTTGAATACCTGCAAGAGGTGGCCCGGAT...AGAGAAGACTCCTCTCTCCTCGTCTGCGGCGTGGACTTGATCATGGACTGGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp TTTATGCGTGAGAAAACCAAGGCCCTGATGGTGTCCCTGGTCCAAGTCCAGTGCACCAGGTACACCCGGTaGCAGTCGTTCTCCACCCGG +
Preference number: 4 (lower is better)
Translates to: FMREKTKALMVSLVQVQCTRYTR*QSFSTR
Trigger: CCGGGTGGAGAACGACTGGCACCGGGTGTACCTGGT...GCACTGGACTTGGACCAGGGACACCATCAGGGCCTTGGTTTTCTCACGCATAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp CACTGGTGGCACCATGACAGTGAGGAGAACGGAGCACAGTTCCTTCCGTGCCTCGAGGTTTGTGGTCAATaGCTCCAATCGGCGCATGGC +
Preference number: 4 (lower is better)
Translates to: HWWHHDSEENGAQFLPCLEVCGQ*LQSAHG
Trigger: GCCATGCGCCGATTGGAGGCATTGACCACAAACCTC...GAGGCACGGAAGGAACTGTGCTCCGTTCTCCTCACTGTCATGGTGCCACCAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp CAGATCTCGGTGGCAGGTGGCTCTGCACAGTCCAGAGTGATAAAACAATCACAGGCCTCCTGCCGGCGCTaGTCAAGGTGTGCATGGCTG +
Preference number: 4 (lower is better)
Translates to: QISVAGGSAQSRVIKQSQASCRR*SRCAWL
Trigger: CAGCCATGCACACCTTGAGCAGCGCCGGCAGGAGGC...CTGTGATTGTTTTATCACTCTGGACTGTGCAGAGCCACCTGCCACCGAGATCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp CACGCCGCAGACGAGGAGAGAGGAGTCTTCTCTCCAAAGTCATCCAAAGATAGCCTCCTCCGCTTGGCGTaGCACCTCGTAGCTCAGCTG +
Preference number: 4 (lower is better)
Translates to: HAADEERGVFSPKSSKDSLLRLA*HLVAQL
Trigger: CAGCTGAGCTACGAGGTGGCACGCCAAGCGGAGGAG...GCTATCTTTGGATGACTTTGGAGAGAAGACTCCTCTCTCCTCGTCTGCGGCGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp TTTATGCGTGAGAAAACCAAGGCCCTGATGGTGTCCCTGGTCCAAGTCCAGTGCGGGTGGAGTGCGGGCTaGACTGGAAGGACACCAGGT +
Preference number: 4 (lower is better)
Translates to: FMREKTKALMVSLVQVQCGWSAG*TGRTPG
Trigger: ACCTGGTGTCCTTCCAGTGCAGCCCGCACTCCACCC...GCACTGGACTTGGACCAGGGACACCATCAGGGCCTTGGTTTTCTCACGCATAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp CACTGGTGGCACCATGACAGTGAGGAGAACGGAGCACAGTTCCTTCCGTGCCTCCCTAAGGACAGCCTGTaGAATGTCTTGCGGGGAAGG +
Preference number: 4 (lower is better)
Translates to: HWWHHDSEENGAQFLPCLPKDSL*NVLRGR
Trigger: CCTTCCCCGCAAGACATTGCACAGGCTGTCCTTAGG...GAGGCACGGAAGGAACTGTGCTCCGTTCTCCTCACTGTCATGGTGCCACCAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp GGAGAACGGAGCACAGTTCCTTCCGTGCCTCCTGCCGGCGCTGCTCAAGGTGTGTTCTGTTTGATCAGCTaGATGGGGCTGACTTCCTCT +
Preference number: 4 (lower is better)
Translates to: GERSTVPSVPPAGAAQGVFCLIS*MGLTSS
Trigger: AGAGGAAGTCAGCCCCATGCAGCTGATCAAACAGAA...CACACCTTGAGCAGCGCCGGCAGGAGGCACGGAAGGAACTGTGCTCCGTTCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp GGAATGCAGATCTCGGTGGCAGGTGGCTCTGCACAGTCCAGAGTGATAAAACAACGACAGCCACTCCGCTaGGAACCCGCCCAGCGAGTA +
Preference number: 4 (lower is better)
Translates to: GMQISVAGGSAQSRVIKQRQPLR*EPAQRV
Trigger: TACTCGCTGGGCGGGTTCGCAGCGGAGTGGCTGTCG...TTGTTTTATCACTCTGGACTGTGCAGAGCCACCTGCCACCGAGATCTGCATTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp TCAGCAAGCCAGCCCCCGGCCCCCACACCCGTTCATAGGCAGTCGGAATGCAGATGCCTGAAGGAAATCTaGAAAGGAGTTGTGCCTCTG +
Preference number: 4 (lower is better)
Translates to: SASQPPAPTPVHRQSECRCLKEI*KGVVPL
Trigger: CAGAGGCACAACTCCTTTGCAGATTTCCTTCAGGCA...TCTGCATTCCGACTGCCTATGAACGGGTGTGGGGGCCGGGGGCTGGCTTGCTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp TGTCCTGTTCCAGCCACTGGTTCACGCACACTAGCCAGGTGCGCCCTGGAGGCTATAAACCAGGGAACATaGAGGCTCCAAGGGATGCCA +
Preference number: 4 (lower is better)
Translates to: CPVPATGSRTLARCALEAINQGT*RLQGMP
Trigger: TGGCATCCCTTGGAGCCTGCATGTTCCCTGGTTTAT...AGCCTCCAGGGCGCACCTGGCTAGTGTGCGTGAACCAGTGGCTGGAACAGGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573038.1
CDS-3UTR GCA 90 bp CACGCCGCAGACGAGGAGAGAGGAGTCTTCTCTCCAAAGTCATCCAAAGATAGCCCCTCCAGTCTCTCCTaGTTCCCCCTGCTTTGGCCC +
Preference number: 4 (lower is better)
Translates to: HAADEERGVFSPKSSKDSPSSLS*FPLLWP
Trigger: GGGCCAAAGCAGGGGGAAGCAGGAGAGACTGGAGGG...GCTATCTTTGGATGACTTTGGAGAGAAGACTCCTCTCTCCTCGTCTGCGGCGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR CCA 90 bp AGAGGTGTAAGCGTTTCAGTCCCAGATCGGCTACAGGGAGTGGCGCTCAGCTCCTGGGGGTTTCCTCCTTaGAGACATGCTGGCACGAAG +
Preference number: 4 (lower is better)
Translates to: RGVSVSVPDRLQGVALSSWGFPP*RHAGTK
Trigger: CTTCGTGCCAGCATGTCTCCAAGGAGGAAACCCCCA...GGAGCTGAGCGCCACTCCCTGTAGCCGATCTGGGACTGAAACGCTTACACCTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR CCA 90 bp ATCAAGTCCACGCCGCAGACGAGGAGAGAGGAGTCTTCTCTCCAAAGTCATCCACGGTCCAGGAGGCTTTaGAACAGGGCTCCTCGGGGT +
Preference number: 4 (lower is better)
Translates to: IKSTPQTRREESSLQSHPRSRRL*NRAPRG
Trigger: ACCCCGAGGAGCCCTGTTCCAAAGCCTCCTGGACCG...TGGATGACTTTGGAGAGAAGACTCCTCTCTCCTCGTCTGCGGCGTGGACTTGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp AGGAGGATGATGGCTAAAGGGGCCGGGTTTCTCTTTGAAGTGATGAAAATGCTCCCTCCAGTGGCGTGGTaGCTGTGCCTGGGGGCTGGC +
Preference number: 4 (lower is better)
Translates to: RRMMAKGAGFLFEVMKMLPPVAW*LCLGAG
Trigger: GCCAGCCCCCAGGCACAGCCACCACGCCACTGGAGG...GAGCATTTTCATCACTTCAAAGAGAAACCCGGCCCCTTTAGCCATCATCCTCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000319921.4
CDS-3UTR CCA 90 bp TCGGCTTTCAAAAAGCTGTCAGCTCAGGTAGCACGCCTTGGTCTTGAATTCGGTCACCCTCCAGTGGCGTaGTGGCTGTGCCTGGGGGCT +
Preference number: 4 (lower is better)
Translates to: SAFKKLSAQVARLGLEFGHPPVA*WLCLGA
Trigger: AGCCCCCAGGCACAGCCACCACGCCACTGGAGGGTG...ACCGAATTCAAGACCAAGGCGTGCTACCTGAGCTGACAGCTTTTTGAAAGCCGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp TCGGCTTTCAAAAAGCTGTCAGCTCAGGTAGCACGCCTTGGTCTTGAATTCGGTTGTCGCCAACCTCGGTaGGCGCGGAGAGGCCGTCAC +
Preference number: 4 (lower is better)
Translates to: SAFKKLSAQVARLGLEFGCRQPR*ARRGRH
Trigger: GTGACGGCCTCTCCGCGCCCACCGAGGTTGGCGACA...ACCGAATTCAAGACCAAGGCGTGCTACCTGAGCTGACAGCTTTTTGAAAGCCGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp TTTATGCGTGAGAAAACCAAGGCCCTGATGGTGTCCCTGGTCCAAGTCCAGTGCCTCCTTGGCCATCTCTaGGCCTCCCTCAGGCTCCGA +
Preference number: 4 (lower is better)
Translates to: FMREKTKALMVSLVQVQCLLGHL*ASLRLR
Trigger: TCGGAGCCTGAGGGAGGCCCAGAGATGGCCAAGGAG...GCACTGGACTTGGACCAGGGACACCATCAGGGCCTTGGTTTTCTCACGCATAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp ATCAAGTCCACGCCGCAGACGAGGAGAGAGGAGTCTTCTCTCCAAAGTCATCCAAACTCCATCCCCCGCTaGCTGCTGAGCTTCCGCACC +
Preference number: 4 (lower is better)
Translates to: IKSTPQTRREESSLQSHPNSIPR*LLSFRT
Trigger: GGTGCGGAAGCTCAGCAGCCAGCGGGGGATGGAGTT...TGGATGACTTTGGAGAGAAGACTCCTCTCTCCTCGTCTGCGGCGTGGACTTGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp CAGATCTCGGTGGCAGGTGGCTCTGCACAGTCCAGAGTGATAAAACAATCACAGTTGGGAAACACCCACTaGTGCGGGCGGCCGGGCTTG +
Preference number: 4 (lower is better)
Translates to: QISVAGGSAQSRVIKQSQLGNTH*CGRPGL
Trigger: CAAGCCCGGCCGCCCGCACCAGTGGGTGTTTCCCAA...CTGTGATTGTTTTATCACTCTGGACTGTGCAGAGCCACCTGCCACCGAGATCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp GCAAATCTGTCAACCCAGCTCAACTGTCATAGCTGTCCTGTTCCAGCCACTGGTCCTATCCATCTGGCCTaGGTGGTCCTGCCGCAGCCC +
Preference number: 4 (lower is better)
Translates to: ANLSTQLNCHSCPVPATGPIHLA*VVLPQP
Trigger: GGGCTGCGGCAGGACCACCCAGGCCAGATGGATAGG...ACCAGTGGCTGGAACAGGACAGCTATGACAGTTGAGCTGGGTTGACAGATTTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573038.1
CDS-3UTR CCA 90 bp GGAGAACGGAGCACAGTTCCTTCCGTGCCTCCTGCCGGCGCTGCTCAAGGTGTGGTCTTCAGGCATGGTTaGAAGAAAAGCATGCGCCAT +
Preference number: 4 (lower is better)
Translates to: GERSTVPSVPPAGAAQGVVFRHG*KKSMRH
Trigger: ATGGCGCATGCTTTTCTTCCAACCATGCCTGAAGAC...CACACCTTGAGCAGCGCCGGCAGGAGGCACGGAAGGAACTGTGCTCCGTTCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp TCAGCAAGCCAGCCCCCGGCCCCCACACCCGTTCATAGGCAGTCGGAATGCAGAGTCTTCAGGCATGGTTaGAAGAAAAGCATGCGCCAT +
Preference number: 4 (lower is better)
Translates to: SASQPPAPTPVHRQSECRVFRHG*KKSMRH
Trigger: ATGGCGCATGCTTTTCTTCCAACCATGCCTGAAGAC...TCTGCATTCCGACTGCCTATGAACGGGTGTGGGGGCCGGGGGCTGGCTTGCTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp AGCTCCGAGTGCAAGTTGAAGACTTCAGCAAGCCAGCCCCCGGCCCCCACACCCGCAAGTCTTCAGGCATaGTTGGAAGAAAAGCATGCG +
Preference number: 4 (lower is better)
Translates to: SSECKLKTSASQPPAPTPASLQA*LEEKHA
Trigger: CGCATGCTTTTCTTCCAACCATGCCTGAAGACTTGC...GGGTGTGGGGGCCGGGGGCTGGCTTGCTGAAGTCTTCAACTTGCACTCGGAGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp CACTGGTGGCACCATGACAGTGAGGAGAACGGAGCACAGTTCCTTCCGTGCCTCGGACAAGTGTACCAGTaGACTCGCTCCAGACCCTTC +
Preference number: 4 (lower is better)
Translates to: HWWHHDSEENGAQFLPCLGQVYQ*TRSRPF
Trigger: GAAGGGTCTGGAGCGAGTCCACTGGTACACTTGTCC...GAGGCACGGAAGGAACTGTGCTCCGTTCTCCTCACTGTCATGGTGCCACCAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp TTTATGCGTGAGAAAACCAAGGCCCTGATGGTGTCCCTGGTCCAAGTCCAGTGCGGTGGACCACGCCGATaGTCTCGTCGGCACTGTGTC +
Preference number: 4 (lower is better)
Translates to: FMREKTKALMVSLVQVQCGGPRR*SRRHCV
Trigger: GACACAGTGCCGACGAGACCATCGGCGTGGTCCACC...GCACTGGACTTGGACCAGGGACACCATCAGGGCCTTGGTTTTCTCACGCATAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp GCCAGCTCTGAGGTATCAAAGGAGCTCCGAGTGCAAGTTGAAGACTTCAGCAAGCTGCGCAGGACGAGGTaGACCACGCCGATGGTCTCG +
Preference number: 4 (lower is better)
Translates to: ASSEVSKELRVQVEDFSKLRRTR*TTPMVS
Trigger: CGAGACCATCGGCGTGGTCCACCTCGTCCTGCGCAG...CTTGCTGAAGTCTTCAACTTGCACTCGGAGCTCCTTTGATACCTCAGAGCTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp AGCTCCGAGTGCAAGTTGAAGACTTCAGCAAGCCAGCCCCCGGCCCCCACACCCCAAATCTTAGAGCAATaGACCACACTTTTCCGGGGC +
Preference number: 4 (lower is better)
Translates to: SSECKLKTSASQPPAPTPQILEQ*TTLFRG
Trigger: GCCCCGGAAAAGTGTGGTCCATTGCTCTAAGATTTG...GGGTGTGGGGGCCGGGGGCTGGCTTGCTGAAGTCTTCAACTTGCACTCGGAGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp CACGCCGCAGACGAGGAGAGAGGAGTCTTCTCTCCAAAGTCATCCAAAGATAGCCCCCCTGCTGAGGTGTaGCCAGTGAGTCTGGGTGTG +
Preference number: 4 (lower is better)
Translates to: HAADEERGVFSPKSSKDSPPAEV*PVSLGV
Trigger: CACACCCAGACTCACTGGCCACACCTCAGCAGGGGG...GCTATCTTTGGATGACTTTGGAGAGAAGACTCCTCTCTCCTCGTCTGCGGCGTG
58% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp ATCAAGTCCACGCCGCAGACGAGGAGAGAGGAGTCTTCTCTCCAAAGTCATCCACCCCCTGCTGAGGTGTaGCCAGTGAGTCTGGGTGTG +
Preference number: 4 (lower is better)
Translates to: IKSTPQTRREESSLQSHPPPAEV*PVSLGV
Trigger: CACACCCAGACTCACTGGCCACACCTCAGCAGGGGG...TGGATGACTTTGGAGAGAAGACTCCTCTCTCCTCGTCTGCGGCGTGGACTTGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp TCGGCTTTCAAAAAGCTGTCAGCTCAGGTAGCACGCCTTGGTCTTGAATTCGGTCTGCAGAAGGCACGCTaGCGGCCTCAAGCGGGGCTG +
Preference number: 4 (lower is better)
Translates to: SAFKKLSAQVARLGLEFGLQKAR*RPQAGL
Trigger: CAGCCCCGCTTGAGGCCGCCAGCGTGCCTTCTGCAG...ACCGAATTCAAGACCAAGGCGTGCTACCTGAGCTGACAGCTTTTTGAAAGCCGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000508628.6
CDS-3UTR CCA 90 bp GGAGAACGGAGCACAGTTCCTTCCGTGCCTCCTGCCGGCGCTGCTCAAGGTGTGAGTCACACAGTTTCCTaGGCAGGTACTGGTCCTTAT +
Preference number: 4 (lower is better)
Translates to: GERSTVPSVPPAGAAQGVSHTVS*AGTGPY
Trigger: ATAAGGACCAGTACCTGCCCAGGAAACTGTGTGACT...CACACCTTGAGCAGCGCCGGCAGGAGGCACGGAAGGAACTGTGCTCCGTTCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp GCACGCCTTGGTCTTGAATTCGGTGCTACGCTGACAGCTCTCCTTCTGAATGCAGGGACACACCCTGCTTaGGGGAGCAGTAGGCCATGG +
Preference number: 4 (lower is better)
Translates to: ARLGLEFGATLTALLLNAGTHPA*GSSRPW
Trigger: CCATGGCCTACTGCTCCCCCAAGCAGGGTGTGTCCC...TGCATTCAGAAGGAGAGCTGTCAGCGTAGCACCGAATTCAAGACCAAGGCGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp TCAAGTCCACGCCGCAGACGAGGAGAGAGGAGTCTTCTCTCCAAAGTCATCCAAACGACGAGGTTGGGCTaGCCGACCTGCAGACCTCTC +
Preference number: 4 (lower is better)
Translates to: SSPRRRRGERSLLSKVIQTTRLG*PTCRPL
Trigger: GAGAGGTCTGCAGGTCGGCCAGCCCAACCTCGTCGT...TTGGATGACTTTGGAGAGAAGACTCCTCTCTCCTCGTCTGCGGCGTGGACTTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp AGAAACAGCTCGGCTTTCAAAAAGCTGTCAGCTCAGGTAGCACGCCTTGGTCTTGACAGCCAGGGCGGCTaGCAACACCTCGGAGTGGCC +
Preference number: 4 (lower is better)
Translates to: RNSSAFKKLSAQVARLGLDSQGG*QHLGVA
Trigger: GGCCACTCCGAGGTGTTGCCAGCCGCCCTGGCTGTC...AAGACCAAGGCGTGCTACCTGAGCTGACAGCTTTTTGAAAGCCGAGCTGTTTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp TTTATGCGTGAGAAAACCAAGGCCCTGATGGTGTCCCTGGTCCAAGTCCAGTGCGCACCTCATCGTAAGTaGGCAGGGGCTGGCTTGGGG +
Preference number: 4 (lower is better)
Translates to: FMREKTKALMVSLVQVQCAPHRK*AGAGLG
Trigger: CCCCAAGCCAGCCCCTGCCCACTTACGATGAGGTGC...GCACTGGACTTGGACCAGGGACACCATCAGGGCCTTGGTTTTCTCACGCATAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp GGGGTGGGCAGTGCCAGAGGCGAACGGGCACAGGTCATTACTGCGTGTGTGGCTTCAACGATATACAAATaGCAGGGGTTCCGAAGCCAC +
Preference number: 4 (lower is better)
Translates to: GVGSARGERAQVITACVASTIYK*QGFRSH
Trigger: GTGGCTTCGGAACCCCTGCCATTTGTATATCGTTGA...AGCCACACACGCAGTAATGACCTGTGCCCGTTCGCCTCTGGCACTGCCCACCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp TCAGCAAGCCAGCCCCCGGCCCCCACACCCGTTCATAGGCAGTCGGAATGCAGATCAAGAAAACTGAACTaGGGTACACGTGTACGCAGC +
Preference number: 4 (lower is better)
Translates to: SASQPPAPTPVHRQSECRSRKLN*GTRVRS
Trigger: GCTGCGTACACGTGTACCCCAGTTCAGTTTTCTTGA...TCTGCATTCCGACTGCCTATGAACGGGTGTGGGGGCCGGGGGCTGGCTTGCTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp TTTATGCGTGAGAAAACCAAGGCCCTGATGGTGTCCCTGGTCCAAGTCCAGTGCCTCGGGGGCAGAGCATaGACCCGGTATACCAGCTGC +
Preference number: 4 (lower is better)
Translates to: FMREKTKALMVSLVQVQCLGGRA*TRYTSC
Trigger: GCAGCTGGTATACCGGGTCCATGCTCTGCCCCCGAG...GCACTGGACTTGGACCAGGGACACCATCAGGGCCTTGGTTTTCTCACGCATAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp GCACGCCTTGGTCTTGAATTCGGTGCTACGCTGACAGCTCTCCTTCTGAATGCACTCGGGGGCAGAGCATaGACCCGGTATACCAGCTGC +
Preference number: 4 (lower is better)
Translates to: ARLGLEFGATLTALLLNALGGRA*TRYTSC
Trigger: GCAGCTGGTATACCGGGTCCATGCTCTGCCCCCGAG...TGCATTCAGAAGGAGAGCTGTCAGCGTAGCACCGAATTCAAGACCAAGGCGTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp GGGGAGTCTAAAACCAGCTGTAACCAAGTGTCTGTGTACGGGAACTGGTGTGGGGAGTGCGGGCTGCACTaGAAGGACACCAGGTGGACC +
Preference number: 4 (lower is better)
Translates to: GESKTSCNQVSVYGNWCGECGLH*KDTRWT
Trigger: GGTCCACCTGGTGTCCTTCCAGTGCAGCCCGCACTC...CCCACACCAGTTCCCGTACACAGACACTTGGTTACAGCTGGTTTTAGACTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR CCA 90 bp CACGCCGCAGACGAGGAGAGAGGAGTCTTCTCTCCAAAGTCATCCAAAGATAGCTCCATCGCCTCCTCATaGCCGTCTTCCGCCCGGTGT +
Preference number: 4 (lower is better)
Translates to: HAADEERGVFSPKSSKDSSIASS*PSSARC
Trigger: ACACCGGGCGGAAGACGGCCATGAGGAGGCGATGGA...GCTATCTTTGGATGACTTTGGAGAGAAGACTCCTCTCTCCTCGTCTGCGGCGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp GCACCAGTCCATGATCAAGTCCACGCCGCAGACGAGGAGAGAGGAGTCTTCTCTTGCTGCGGCTCTCCATaGAGCTGGGCAAGAAACCTG +
Preference number: 4 (lower is better)
Translates to: APVHDQVHAADEERGVFSCCGSP*SWARNL
Trigger: CAGGTTTCTTGCCCAGCTCCATGGAGAGCCGCAGCA...AGAGAAGACTCCTCTCTCCTCGTCTGCGGCGTGGACTTGATCATGGACTGGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp AGCTCCGAGTGCAAGTTGAAGACTTCAGCAAGCCAGCCCCCGGCCCCCACACCCAGATGGTCAGGATTCTaGAAAAGTTCTGCAGACGGC +
Preference number: 4 (lower is better)
Translates to: SSECKLKTSASQPPAPTPRWSGF*KSSADG
Trigger: GCCGTCTGCAGAACTTTTCCAGAATCCTGACCATCT...GGGTGTGGGGGCCGGGGGCTGGCTTGCTGAAGTCTTCAACTTGCACTCGGAGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp ATTGTTTATGCCTGCAGAGGGGAGTGGGTGACTAGAGGGGAGGAGGATGATGGCTTCTTGCCAACTGTCTaGGCCCGGGAACAAGCACGG +
Preference number: 4 (lower is better)
Translates to: IVYACRGEWVTRGEEDDGFLPTV*AREQAR
Trigger: CCGTGCTTGTTCCCGGGCTCAGACAGTTGGCAAGAA...GCCATCATCCTCCTCCCCTCTAGTCACCCACTCCCCTCTGCAGGCATAAACAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319921.4
CDS-3UTR TCA 90 bp CACTGGTGGCACCATGACAGTGAGGAGAACGGAGCACAGTTCCTTCCGTGCCTCCTGAGGCCACGGGTTTaGAAGCAAAGTCAGGTGACA +
Preference number: 4 (lower is better)
Translates to: HWWHHDSEENGAQFLPCLLRPRV*KQSQVT
Trigger: TGTCACCTGACTTTGCTTTCAAACCCGTGGCCTCAG...GAGGCACGGAAGGAACTGTGCTCCGTTCTCCTCACTGTCATGGTGCCACCAGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp AGAGGTGTAAGCGTTTCAGTCCCAGATCGGCTACAGGGAGTGGCGCTCAGCTCCCTGAGGCCACGGGTTTaGAAGCAAAGTCAGGTGACA +
Preference number: 4 (lower is better)
Translates to: RGVSVSVPDRLQGVALSSLRPRV*KQSQVT
Trigger: TGTCACCTGACTTTGCTTTCAAACCCGTGGCCTCAG...GGAGCTGAGCGCCACTCCCTGTAGCCGATCTGGGACTGAAACGCTTACACCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR TCA 90 bp CAGATCTCGGTGGCAGGTGGCTCTGCACAGTCCAGAGTGATAAAACAATCACAGGGCAGGGCTGTGTCCTaGGGCCACGGGTTTGAAAGC +
Preference number: 4 (lower is better)
Translates to: QISVAGGSAQSRVIKQSQGRAVS*GHGFES
Trigger: GCTTTCAAACCCGTGGCCTCAGGACACAGCCCTGCC...CTGTGATTGTTTTATCACTCTGGACTGTGCAGAGCCACCTGCCACCGAGATCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp TCAGCTCCACTGTGGAGTCGCCAGGATGCTGTCATTTTGTCCAGAGGAAAAGTCCGTGGAAGAACACGGTaGCTCCTCCACCCGGGCTCA +
Preference number: 4 (lower is better)
Translates to: SAPLWSRQDAVILSRGKVRGRTR*LLHPGS
Trigger: TGAGCCCGGGTGGAGGAGTCACCGTGTTCTTCCACG...GACTTTTCCTCTGGACAAAATGACAGCATCCTGGCGACTCCACAGTGGAGCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR TCA 90 bp ACAGTGATGACAGGGCCATCTGAGGAACGGCCTGCAAGCCCGTGTGACTTGTGCTATTGCAGTAGGCAGTaGTCTGGGAGAGGGGTTCCT +
Preference number: 4 (lower is better)
Translates to: TVMTGPSEERPASPCDLCYCSRQ*SGRGVP
Trigger: AGGAACCCCTCTCCCAGATCACTGCCTACTGCAATA...GCACAAGTCACACGGGCTTGCAGGCCGTTCCTCAGATGGCCCTGTCATCACTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319921.4
CDS-3UTR TCA 90 bp CGGGGGCCTGCTACACACTGCTCTGGCCAGGCATTCCACTGGGGCAATTGCCTGATGTTGCAAAACGGCTaGTATCAGGAGGTGAAAGGA +
Preference number: 4 (lower is better)
Translates to: RGPATHCSGQAFHWGNCLMLQNG*YQEVKG
Trigger: TCCTTTCACCTCCTGATATCAGCCGTTTTGCAACAT...CAGGCAATTGCCCCAGTGGAATGCCTGGCCAGAGCAGTGTGTAGCAGGCCCCCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR TCA 90 bp ATCAAGTCCACGCCGCAGACGAGGAGAGAGGAGTCTTCTCTCCAAAGTCATCCACCTGGAGGAAGCGGCTaGCGATCTGCCGCTGAATCT +
Preference number: 4 (lower is better)
Translates to: IKSTPQTRREESSLQSHPPGGSG*RSAAES
Trigger: AGATTCAGCGGCAGATCGTCAGCCGCTTCCTCCAGG...TGGATGACTTTGGAGAGAAGACTCCTCTCTCCTCGTCTGCGGCGTGGACTTGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp GCCAGCTCTGAGGTATCAAAGGAGCTCCGAGTGCAAGTTGAAGACTTCAGCAAGGAGTGGGTATTCCCTTaGGGCTCAGCCGGGGCTTGC +
Preference number: 4 (lower is better)
Translates to: ASSEVSKELRVQVEDFSKEWVFP*GSAGAC
Trigger: GCAAGCCCCGGCTGAGCCTCAAGGGAATACCCACTC...CTTGCTGAAGTCTTCAACTTGCACTCGGAGCTCCTTTGATACCTCAGAGCTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp GGAGAACGGAGCACAGTTCCTTCCGTGCCTCCTGCCGGCGCTGCTCAAGGTGTGATCCGCTTTGTACCTTaGACTGATTTCCCCAAATGG +
Preference number: 4 (lower is better)
Translates to: GERSTVPSVPPAGAAQGVIRFVP*TDFPKW
Trigger: CCATTTGGGGAAATCAGTTCAAGGTACAAAGCGGAT...CACACCTTGAGCAGCGCCGGCAGGAGGCACGGAAGGAACTGTGCTCCGTTCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp AGAGGTGTAAGCGTTTCAGTCCCAGATCGGCTACAGGGAGTGGCGCTCAGCTCCTACTGCGTGTGTGGCTaGGCTACAAGTCTCCTGGAA +
Preference number: 4 (lower is better)
Translates to: RGVSVSVPDRLQGVALSSYCVCG*ATSLLE
Trigger: TTCCAGGAGACTTGTAGCTCAGCCACACACGCAGTA...GGAGCTGAGCGCCACTCCCTGTAGCCGATCTGGGACTGAAACGCTTACACCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR TCA 90 bp TCAAGTCCACGCCGCAGACGAGGAGAGAGGAGTCTTCTCTCCAAAGTCATCCAATGCACCGGGCCTCGCTaGTGTCCTGGAGCAGCTTTT +
Preference number: 4 (lower is better)
Translates to: SSPRRRRGERSLLSKVIQCTGPR*CPGAAF
Trigger: AAAAGCTGCTCCAGGACATCAGCGAGGCCCGGTGCA...TTGGATGACTTTGGAGAGAAGACTCCTCTCTCCTCGTCTGCGGCGTGGACTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp GCACCAGTCCATGATCAAGTCCACGCCGCAGACGAGGAGAGAGGAGTCTTCTCTACACCTTCAGCTCATTaGTGCCTCCAAGAGCCTCCC +
Preference number: 4 (lower is better)
Translates to: APVHDQVHAADEERGVFSTPSAH*CLQEPP
Trigger: GGGAGGCTCTTGGAGGCATCAATGAGCTGAAGGTGT...AGAGAAGACTCCTCTCTCCTCGTCTGCGGCGTGGACTTGATCATGGACTGGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp TCAGCTCCACTGTGGAGTCGCCAGGATGCTGTCATTTTGTCCAGAGGAAAAGTCCACACAGCCGGTCATTaGACACGGCTGCCGCCGACA +
Preference number: 4 (lower is better)
Translates to: SAPLWSRQDAVILSRGKVHTAGH*TRLPPT
Trigger: TGTCGGCGGCAGCCGTGTTCAATGACCGGCTGTGTG...GACTTTTCCTCTGGACAAAATGACAGCATCCTGGCGACTCCACAGTGGAGCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR TCA 90 bp AGAGGTGTAAGCGTTTCAGTCCCAGATCGGCTACAGGGAGTGGCGCTCAGCTCCACCTTCCCAGTCAAGTaGCTGATGGCATCGACACTG +
Preference number: 4 (lower is better)
Translates to: RGVSVSVPDRLQGVALSSTFPVK*LMASTL
Trigger: CAGTGTCGATGCCATCAGTCACTTGACTGGGAAGGT...GGAGCTGAGCGCCACTCCCTGTAGCCGATCTGGGACTGAAACGCTTACACCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR TCA 90 bp GCACCAGTCCATGATCAAGTCCACGCCGCAGACGAGGAGAGAGGAGTCTTCTCTTCTGCAGACGGCTTCTaGAACGCTGGTAGGCAAGGT +
Preference number: 4 (lower is better)
Translates to: APVHDQVHAADEERGVFSSADGF*NAGRQG
Trigger: ACCTTGCCTACCAGCGTTTCAGAAGCCGTCTGCAGA...AGAGAAGACTCCTCTCTCCTCGTCTGCGGCGTGGACTTGATCATGGACTGGTGC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp AGAGGTGTAAGCGTTTCAGTCCCAGATCGGCTACAGGGAGTGGCGCTCAGCTCCAAAGATCGTGGGTTCTaGGGAAGTGGCTGTCCTCTG +
Preference number: 4 (lower is better)
Translates to: RGVSVSVPDRLQGVALSSKDRGF*GSGCPL
Trigger: CAGAGGACAGCCACTTCCTCAGAACCCACGATCTTT...GGAGCTGAGCGCCACTCCCTGTAGCCGATCTGGGACTGAAACGCTTACACCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR GCA 90 bp TCAAGTCCACGCCGCAGACGAGGAGAGAGGAGTCTTCTCTCCAAAGTCATCCAAGGGTCCTGCTGGGACTaGCCTGCAGATCCAGAAGCA +
Preference number: 4 (lower is better)
Translates to: SSPRRRRGERSLLSKVIQGSCWD*PADPEA
Trigger: TGCTTCTGGATCTGCAGGGCAGTCCCAGCAGGACCC...TTGGATGACTTTGGAGAGAAGACTCCTCTCTCCTCGTCTGCGGCGTGGACTTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp TTTCAGGCAGGGCATGGGGGACTCCTTCTGAGGCAGAGGTGTAAGCGTTTCAGTACACTCCATGGGTCCTaGTGGGACTGCCCTGCAGAT +
Preference number: 4 (lower is better)
Translates to: FQAGHGGLLLRQRCKRFSTLHGS*WDCPAD
Trigger: ATCTGCAGGGCAGTCCCAGCAGGACCCATGGAGTGT...ACTGAAACGCTTACACCTCTGCCTCAGAAGGAGTCCCCCATGCCCTGCCTGAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR GCA 90 bp CTGGACTTCCCCTGTGGCCGCAAGGCTGTGCTTGTACAGGGGTTAAGTGTCCAATCCTCCTTGGAGACATaGTGGCACGAAGGACACTCC +
Preference number: 4 (lower is better)
Translates to: LDFPCGRKAVLVQGLSVQSSLET*WHEGHS
Trigger: GGAGTGTCCTTCGTGCCAGCATGTCTCCAAGGAGGA...TTGGACACTTAACCCCTGTACAAGCACAGCCTTGCGGCCACAGGGGAAGTCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319921.4
CDS-3UTR GCA 90 bp AGGAGGATGATGGCTAAAGGGGCCGGGTTTCTCTTTGAAGTGATGAAAATGCTCCCCAAAGCCTGGGCCTaGAGGGGGCTGTCGCCAACC +
Preference number: 4 (lower is better)
Translates to: RRMMAKGAGFLFEVMKMLPKAWA*RGLSPT
Trigger: GGTTGGCGACAGCCCCCTGCAGGCCCAGGCTTTGGG...GAGCATTTTCATCACTTCAAAGAGAAACCCGGCCCCTTTAGCCATCATCCTCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000319921.4
CDS-3UTR GCA 90 bp TCGGCTTTCAAAAAGCTGTCAGCTCAGGTAGCACGCCTTGGTCTTGAATTCGGTCCTGGGACAGGCCTCTaGCCCCAGAGGGGATGGAAG +
Preference number: 4 (lower is better)
Translates to: SAFKKLSAQVARLGLEFGPGTGL*PQRGWK
Trigger: CTTCCATCCCCTCTGGGGGCAGAGGCCTGTCCCAGG...ACCGAATTCAAGACCAAGGCGTGCTACCTGAGCTGACAGCTTTTTGAAAGCCGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp ATTGTTTATGCCTGCAGAGGGGAGTGGGTGACTAGAGGGGAGGAGGATGATGGCCCCGGCCCCTTTAACTaGATTGGCTGGCTCAGCTAC +
Preference number: 4 (lower is better)
Translates to: IVYACRGEWVTRGEEDDGPGPFN*IGWLSY
Trigger: GTAGCTGAGCCAGCCAATGCAGTTAAAGGGGCCGGG...GCCATCATCCTCCTCCCCTCTAGTCACCCACTCCCCTCTGCAGGCATAAACAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000319921.4
CDS-3UTR GCA 90 bp AGCTCCGAGTGCAAGTTGAAGACTTCAGCAAGCCAGCCCCCGGCCCCCACACCCTGGAAATGCAGACAATaGCTTCAACAAGAACGCGGT +
Preference number: 4 (lower is better)
Translates to: SSECKLKTSASQPPAPTPWKCRQ*LQQERG
Trigger: ACCGCGTTCTTGTTGAAGGCATTGTCTGCATTTCCA...GGGTGTGGGGGCCGGGGGCTGGCTTGCTGAAGTCTTCAACTTGCACTCGGAGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp GGGGTGGGCAGTGCCAGAGGCGAACGGGCACAGGTCATTACTGCGTGTGTGGCTATCGGTCCACAGCTGTaGCTGTCCTTCATAAATCAT +
Preference number: 4 (lower is better)
Translates to: GVGSARGERAQVITACVAIGPQL*LSFINH
Trigger: ATGATTTATGAAGGACAGGCACAGCTGTGGACCGAT...AGCCACACACGCAGTAATGACCTGTGCCCGTTCGCCTCTGGCACTGCCCACCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp ACAGTGATGACAGGGCCATCTGAGGAACGGCCTGCAAGCCCGTGTGACTTGTGCTGCGTATTCAAGACTTaGTCAAGTCCCGGAAGCCGG +
Preference number: 4 (lower is better)
Translates to: TVMTGPSEERPASPCDLCCVFKT*SSPGSR
Trigger: CCGGCTTCCGGGACTTGAGCAAGTCTTGAATACGCA...GCACAAGTCACACGGGCTTGCAGGCCGTTCCTCAGATGGCCCTGTCATCACTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319921.4
CDS-3UTR GCA 90 bp ACAGTGATGACAGGGCCATCTGAGGAACGGCCTGCAAGCCCGTGTGACTTGTGCTCATGTGGCATTGCCTaGGAGACTGTTCCTGGGAGA +
Preference number: 4 (lower is better)
Translates to: TVMTGPSEERPASPCDLCSCGIA*ETVPGR
Trigger: TCTCCCAGGAACAGTCTCGCAGGCAATGCCACATGA...GCACAAGTCACACGGGCTTGCAGGCCGTTCCTCAGATGGCCCTGTCATCACTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319921.4
CDS-3UTR GCA 90 bp CACGCCGCAGACGAGGAGAGAGGAGTCTTCTCTCCAAAGTCATCCAAAGATAGCTCTGTTCCATCGGCCTaGCACACTCTCCCACGGAGC +
Preference number: 4 (lower is better)
Translates to: HAADEERGVFSPKSSKDSSVPSA*HTLPRS
Trigger: GCTCCGTGGGAGAGTGTGGCAGGCCGATGGAACAGA...GCTATCTTTGGATGACTTTGGAGAGAAGACTCCTCTCTCCTCGTCTGCGGCGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp AGAAACAGCTCGGCTTTCAAAAAGCTGTCAGCTCAGGTAGCACGCCTTGGTCTTACCACGTCTCTCCGCTaGGGGTTGCCCAGCACGTGG +
Preference number: 4 (lower is better)
Translates to: RNSSAFKKLSAQVARLGLTTSLR*GLPSTW
Trigger: CCACGTGCTGGGCAACCCGCAGCGGAGAGACGTGGT...AAGACCAAGGCGTGCTACCTGAGCTGACAGCTTTTTGAAAGCCGAGCTGTTTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp TCAAGTCCACGCCGCAGACGAGGAGAGAGGAGTCTTCTCTCCAAAGTCATCCAAGCTCTTGGAGAAGCCTaGGCAGGACGAGGTGGACCA +
Preference number: 4 (lower is better)
Translates to: SSPRRRRGERSLLSKVIQALGEA*AGRGGP
Trigger: TGGTCCACCTCGTCCTGCGCAGGCTTCTCCAAGAGC...TTGGATGACTTTGGAGAGAAGACTCCTCTCTCCTCGTCTGCGGCGTGGACTTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp GCACCAGTCCATGATCAAGTCCACGCCGCAGACGAGGAGAGAGGAGTCTTCTCTCTGCTAGAGAGCTGGTaGTGCTCTTGGAGAAGCCTG +
Preference number: 4 (lower is better)
Translates to: APVHDQVHAADEERGVFSLLESW*CSWRSL
Trigger: CAGGCTTCTCCAAGAGCAGCACCAGCTCTCTAGCAG...AGAGAAGACTCCTCTCTCCTCGTCTGCGGCGTGGACTTGATCATGGACTGGTGC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp TTTATGCGTGAGAAAACCAAGGCCCTGATGGTGTCCCTGGTCCAAGTCCAGTGCCCTGCACGGTCTCTCTaGCCTCCTCCACCTGGTACT +
Preference number: 4 (lower is better)
Translates to: FMREKTKALMVSLVQVQCPARSL*PPPPGT
Trigger: AGTACCAGGTGGAGGAGGGCAGAGAGACCGTGCAGG...GCACTGGACTTGGACCAGGGACACCATCAGGGCCTTGGTTTTCTCACGCATAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp GCCAGCTCTGAGGTATCAAAGGAGCTCCGAGTGCAAGTTGAAGACTTCAGCAAGTCCTTCCGTGCCTCCTaGCGGCGCTGCTCAAGGTGT +
Preference number: 4 (lower is better)
Translates to: ASSEVSKELRVQVEDFSKSFRAS*RRCSRC
Trigger: ACACCTTGAGCAGCGCCGGCAGGAGGCACGGAAGGA...CTTGCTGAAGTCTTCAACTTGCACTCGGAGCTCCTTTGATACCTCAGAGCTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp AGAAACAGCTCGGCTTTCAAAAAGCTGTCAGCTCAGGTAGCACGCCTTGGTCTTGCACAGTTCCTTCCGTaGCTCCTGCCGGCGCTGCTC +
Preference number: 4 (lower is better)
Translates to: RNSSAFKKLSAQVARLGLAQFLP*LLPALL
Trigger: GAGCAGCGCCGGCAGGAGGCACGGAAGGAACTGTGC...AAGACCAAGGCGTGCTACCTGAGCTGACAGCTTTTTGAAAGCCGAGCTGTTTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp AGAGGTGTAAGCGTTTCAGTCCCAGATCGGCTACAGGGAGTGGCGCTCAGCTCCCAGTCTGGGTCACTCTaGCCTTCATCAGACACTGGT +
Preference number: 4 (lower is better)
Translates to: RGVSVSVPDRLQGVALSSQSGSL*PSSDTG
Trigger: ACCAGTGTCTGATGAAGGGCAGAGTGACCCAGACTG...GGAGCTGAGCGCCACTCCCTGTAGCCGATCTGGGACTGAAACGCTTACACCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR GCA 90 bp GGGGTGGGCAGTGCCAGAGGCGAACGGGCACAGGTCATTACTGCGTGTGTGGCTTTCTTCTTTTTGCTCTaGTCACAGTCTGCAGAAGGC +
Preference number: 4 (lower is better)
Translates to: GVGSARGERAQVITACVAFFFLL*SQSAEG
Trigger: GCCTTCTGCAGACTGTGAGCAGAGCAAAAAGAAGAA...AGCCACACACGCAGTAATGACCTGTGCCCGTTCGCCTCTGGCACTGCCCACCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000508628.6
CDS-3UTR GCA 90 bp GGAGAACGGAGCACAGTTCCTTCCGTGCCTCCTGCCGGCGCTGCTCAAGGTGTGCAGCAGACAAGACGATaGCAAATTTCCGCAAATCAG +
Preference number: 4 (lower is better)
Translates to: GERSTVPSVPPAGAAQGVQQTRR*QISANQ
Trigger: CTGATTTGCGGAAATTTGGCATCGTCTTGTCTGCTG...CACACCTTGAGCAGCGCCGGCAGGAGGCACGGAAGGAACTGTGCTCCGTTCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp GCACCAGTCCATGATCAAGTCCACGCCGCAGACGAGGAGAGAGGAGTCTTCTCTCAGGTGGTAATGCGTTaGCCTCTGCGAGTTCGAGGA +
Preference number: 4 (lower is better)
Translates to: APVHDQVHAADEERGVFSQVVMR*PLRVRG
Trigger: TCCTCGAACTCGCAGAGGGCAACGCATTACCACCTG...AGAGAAGACTCCTCTCTCCTCGTCTGCGGCGTGGACTTGATCATGGACTGGTGC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp ATCAAGTCCACGCCGCAGACGAGGAGAGAGGAGTCTTCTCTCCAAAGTCATCCAGTGACTCCTCGTGGCTaGCAGGGCTCTCAGGAAGGA +
Preference number: 4 (lower is better)
Translates to: IKSTPQTRREESSLQSHPVTPRG*QGSQEG
Trigger: TCCTTCCTGAGAGCCCTGGCAGCCACGAGGAGTCAC...TGGATGACTTTGGAGAGAAGACTCCTCTCTCCTCGTCTGCGGCGTGGACTTGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp TCAAGTCCACGCCGCAGACGAGGAGAGAGGAGTCTTCTCTCCAAAGTCATCCAATTGGGCTGGCCGACCTaGAGACCTCTCGGGAGACAA +
Preference number: 4 (lower is better)
Translates to: SSPRRRRGERSLLSKVIQLGWPT*RPLGRQ
Trigger: TTGTCTCCCGAGAGGTCTGCAGGTCGGCCAGCCCAA...TTGGATGACTTTGGAGAGAAGACTCCTCTCTCCTCGTCTGCGGCGTGGACTTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp CACGCCGCAGACGAGGAGAGAGGAGTCTTCTCTCCAAAGTCATCCAAAGATAGCGCGGCGCAGCAACAGTaGCACCTCCTCAAAGGTGGT +
Preference number: 4 (lower is better)
Translates to: HAADEERGVFSPKSSKDSAAQQQ*HLLKGG
Trigger: ACCACCTTTGAGGAGGTGGCACTGTTGCTGCGCCGC...GCTATCTTTGGATGACTTTGGAGAGAAGACTCCTCTCTCCTCGTCTGCGGCGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp TTTATGCGTGAGAAAACCAAGGCCCTGATGGTGTCCCTGGTCCAAGTCCAGTGCGACCCGGTAGTGACCTaGCAGGTAGGCTTGGATGGC +
Preference number: 4 (lower is better)
Translates to: FMREKTKALMVSLVQVQCDPVVT*QVGLDG
Trigger: GCCATCCAAGCCTACCTGGCAGGTCACTACCGGGTC...GCACTGGACTTGGACCAGGGACACCATCAGGGCCTTGGTTTTCTCACGCATAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp CACTGGTGGCACCATGACAGTGAGGAGAACGGAGCACAGTTCCTTCCGTGCCTCACCCAAATTCCAGTCTaGACTGAGGAGGTCACGTCC +
Preference number: 4 (lower is better)
Translates to: HWWHHDSEENGAQFLPCLTQIPV*TEEVTS
Trigger: GGACGTGACCTCCTCAGTGCAGACTGGAATTTGGGT...GAGGCACGGAAGGAACTGTGCTCCGTTCTCCTCACTGTCATGGTGCCACCAGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp TTTCAGGCAGGGCATGGGGGACTCCTTCTGAGGCAGAGGTGTAAGCGTTTCAGTACCACAGAGACGTACTaGTGCAGGTCCTTCCCCTGC +
Preference number: 4 (lower is better)
Translates to: FQAGHGGLLLRQRCKRFSTTETY*CRSFPC
Trigger: GCAGGGGAAGGACCTGCAGCAGTACGTCTCTGTGGT...ACTGAAACGCTTACACCTCTGCCTCAGAAGGAGTCCCCCATGCCCTGCCTGAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR GCA 90 bp CAGATCTCGGTGGCAGGTGGCTCTGCACAGTCCAGAGTGATAAAACAATCACAGAAGGCCCGGGGACCCTaGCTCTCTATGACCTGCAGC +
Preference number: 4 (lower is better)
Translates to: QISVAGGSAQSRVIKQSQKARGP*LSMTCS
Trigger: GCTGCAGGTCATAGAGAGGCAGGGTCCCCGGGCCTT...CTGTGATTGTTTTATCACTCTGGACTGTGCAGAGCCACCTGCCACCGAGATCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp TTTATGCGTGAGAAAACCAAGGCCCTGATGGTGTCCCTGGTCCAAGTCCAGTGCATGCCCACGGCGCTCTaGACACAGCTTCTCAGCAGC +
Preference number: 4 (lower is better)
Translates to: FMREKTKALMVSLVQVQCMPTAL*TQLLSS
Trigger: GCTGCTGAGAAGCTGTGTGCAGAGCGCCGTGGGCAT...GCACTGGACTTGGACCAGGGACACCATCAGGGCCTTGGTTTTCTCACGCATAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp AGCTCCGAGTGCAAGTTGAAGACTTCAGCAAGCCAGCCCCCGGCCCCCACACCCGACCACAGAGCCATCTaGAGAAACTTTAATTCCTCC +
Preference number: 4 (lower is better)
Translates to: SSECKLKTSASQPPAPTPDHRAI*RNFNSS
Trigger: GGAGGAATTAAAGTTTCTGCAGATGGCTCTGTGGTC...GGGTGTGGGGGCCGGGGGCTGGCTTGCTGAAGTCTTCAACTTGCACTCGGAGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp GGAGAACGGAGCACAGTTCCTTCCGTGCCTCCTGCCGGCGCTGCTCAAGGTGTGATTCTGGAAAAGTTCTaGAGACGGCTTCTGAAACGC +
Preference number: 4 (lower is better)
Translates to: GERSTVPSVPPAGAAQGVILEKF*RRLLKR
Trigger: GCGTTTCAGAAGCCGTCTGCAGAACTTTTCCAGAAT...CACACCTTGAGCAGCGCCGGCAGGAGGCACGGAAGGAACTGTGCTCCGTTCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp ATCAAGTCCACGCCGCAGACGAGGAGAGAGGAGTCTTCTCTCCAAAGTCATCCACTCCGTGCAGGCCATTaGGGCAAATGCGTCCAGGGT +
Preference number: 4 (lower is better)
Translates to: IKSTPQTRREESSLQSHPLRAGH*GKCVQG
Trigger: ACCCTGGACGCATTTGCCGCAATGGCCTGCACGGAG...TGGATGACTTTGGAGAGAAGACTCCTCTCTCCTCGTCTGCGGCGTGGACTTGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp GCACGCCTTGGTCTTGAATTCGGTGCTACGCTGACAGCTCTCCTTCTGAATGCACTGCCTGTTGCTCGGTaGTCTGCAGTTCTGTCCCGG +
Preference number: 4 (lower is better)
Translates to: ARLGLEFGATLTALLLNALPVAR*SAVLSR
Trigger: CCGGGACAGAACTGCAGACCACCGAGCAACAGGCAG...TGCATTCAGAAGGAGAGCTGTCAGCGTAGCACCGAATTCAAGACCAAGGCGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp GCACGCCTTGGTCTTGAATTCGGTGCTACGCTGACAGCTCTCCTTCTGAATGCATGCTCCGCGGGGAATTaGATTTCCACCAGCCGCCTC +
Preference number: 4 (lower is better)
Translates to: ARLGLEFGATLTALLLNACSAGN*ISTSRL
Trigger: GAGGCGGCTGGTGGAAATCCAATTCCCCGCGGAGCA...TGCATTCAGAAGGAGAGCTGTCAGCGTAGCACCGAATTCAAGACCAAGGCGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp ATTGTTTATGCCTGCAGAGGGGAGTGGGTGACTAGAGGGGAGGAGGATGATGGCTCTGGACTTCCCCTGTaGCCGCAAGGCTGTGCTTGT +
Preference number: 4 (lower is better)
Translates to: IVYACRGEWVTRGEEDDGSGLPL*PQGCAC
Trigger: ACAAGCACAGCCTTGCGGCCACAGGGGAAGTCCAGA...GCCATCATCCTCCTCCCCTCTAGTCACCCACTCCCCTCTGCAGGCATAAACAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000319921.4
CDS-3UTR CCA 90 bp TCAAAAGGCGCTGCTGATGGACTTGGCAGATCAGCAAGACACAGCAAATCTGTCTTGGGAAACACCCACTaGTGCGGGCGGCCGGGCTTG +
Preference number: 4 (lower is better)
Translates to: SKGAADGLGRSARHSKSVLGNTH*CGRPGL
Trigger: CAAGCCCGGCCGCCCGCACCAGTGGGTGTTTCCCAA...GACAGATTTGCTGTGTCTTGCTGATCTGCCAAGTCCATCAGCAGCGCCTTTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573038.1
CDS-3UTR CCA 90 bp GCACGCCTTGGTCTTGAATTCGGTGCTACGCTGACAGCTCTCCTTCTGAATGCAAGGTACCTATCCATCTaGCCTGGGTGGTCCTGCCGC +
Preference number: 4 (lower is better)
Translates to: ARLGLEFGATLTALLLNARYLSI*PGWSCR
Trigger: GCGGCAGGACCACCCAGGCCAGATGGATAGGTACCT...TGCATTCAGAAGGAGAGCTGTCAGCGTAGCACCGAATTCAAGACCAAGGCGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp TCAAGTCCACGCCGCAGACGAGGAGAGAGGAGTCTTCTCTCCAAAGTCATCCAAGCTGACTGCTGGCTTTaGGGGGTCTTGCAGGCCTTC +
Preference number: 4 (lower is better)
Translates to: SSPRRRRGERSLLSKVIQADCWL*GVLQAF
Trigger: GAAGGCCTGCAAGACCCCCCAAAGCCAGCAGTCAGC...TTGGATGACTTTGGAGAGAAGACTCCTCTCTCCTCGTCTGCGGCGTGGACTTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp GCACCAGTCCATGATCAAGTCCACGCCGCAGACGAGGAGAGAGGAGTCTTCTCTTGTGTCCCAGCATCTTaGCCAACTGCTCCAGGTCCT +
Preference number: 4 (lower is better)
Translates to: APVHDQVHAADEERGVFSCVPAS*PTAPGP
Trigger: AGGACCTGGAGCAGTTGGCCAAGATGCTGGGACACA...AGAGAAGACTCCTCTCTCCTCGTCTGCGGCGTGGACTTGATCATGGACTGGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp GCCAGCTCTGAGGTATCAAAGGAGCTCCGAGTGCAAGTTGAAGACTTCAGCAAGGGTGGACCACGCCGATaGTCTCGTCGGCACTGTGTC +
Preference number: 4 (lower is better)
Translates to: ASSEVSKELRVQVEDFSKGGPRR*SRRHCV
Trigger: GACACAGTGCCGACGAGACCATCGGCGTGGTCCACC...CTTGCTGAAGTCTTCAACTTGCACTCGGAGCTCCTTTGATACCTCAGAGCTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp GGGGAGTCTAAAACCAGCTGTAACCAAGTGTCTGTGTACGGGAACTGGTGTGGGAGCTGGTGCTGCTCTTaGAGAAGCCTGCGCAGGACG +
Preference number: 4 (lower is better)
Translates to: GESKTSCNQVSVYGNWCGSWCCS*RSLRRT
Trigger: CGTCCTGCGCAGGCTTCTCCAAGAGCAGCACCAGCT...CCCACACCAGTTCCCGTACACAGACACTTGGTTACAGCTGGTTTTAGACTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR CCA 90 bp AGCTCCGAGTGCAAGTTGAAGACTTCAGCAAGCCAGCCCCCGGCCCCCACACCCCTGTATTCAACTTGCTaGACGTTCTGGAACTGCTTC +
Preference number: 4 (lower is better)
Translates to: SSECKLKTSASQPPAPTPLYSTC*TFWNCF
Trigger: GAAGCAGTTCCAGAACGTCCAGCAAGTTGAATACAG...GGGTGTGGGGGCCGGGGGCTGGCTTGCTGAAGTCTTCAACTTGCACTCGGAGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp GGGGTGGGCAGTGCCAGAGGCGAACGGGCACAGGTCATTACTGCGTGTGTGGCTAGCTGTTGTTTTCCTTaGAGAGTTTTTCCACGGCGT +
Preference number: 4 (lower is better)
Translates to: GVGSARGERAQVITACVASCCFP*RVFPRR
Trigger: ACGCCGTGGAAAAACTCTCCAAGGAAAACAACAGCT...AGCCACACACGCAGTAATGACCTGTGCCCGTTCGCCTCTGGCACTGCCCACCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp TTTATGCGTGAGAAAACCAAGGCCCTGATGGTGTCCCTGGTCCAAGTCCAGTGCTCTCGTGACTCCTCGTaGCTGCCAGGGCTCTCAGGA +
Preference number: 4 (lower is better)
Translates to: FMREKTKALMVSLVQVQCSRDSS*LPGLSG
Trigger: TCCTGAGAGCCCTGGCAGCCACGAGGAGTCACGAGA...GCACTGGACTTGGACCAGGGACACCATCAGGGCCTTGGTTTTCTCACGCATAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp CAGATCTCGGTGGCAGGTGGCTCTGCACAGTCCAGAGTGATAAAACAATCACAGGGGACACACCCTGCTTaGGGGAGCAGTAGGCCATGG +
Preference number: 4 (lower is better)
Translates to: QISVAGGSAQSRVIKQSQGTHPA*GSSRPW
Trigger: CCATGGCCTACTGCTCCCCCAAGCAGGGTGTGTCCC...CTGTGATTGTTTTATCACTCTGGACTGTGCAGAGCCACCTGCCACCGAGATCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp GCCAGCTCTGAGGTATCAAAGGAGCTCCGAGTGCAAGTTGAAGACTTCAGCAAGTCCTCATGCGGTACCTaGCGGCCTCACTCCCACACC +
Preference number: 4 (lower is better)
Translates to: ASSEVSKELRVQVEDFSKSSCGT*RPHSHT
Trigger: GGTGTGGGAGTGAGGCCGCCAGGTACCGCATGAGGA...CTTGCTGAAGTCTTCAACTTGCACTCGGAGCTCCTTTGATACCTCAGAGCTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp CACGCCGCAGACGAGGAGAGAGGAGTCTTCTCTCCAAAGTCATCCAAAGATAGCGGCAACACCTCGGAGTaGCCACAGACGACGAGGTTG +
Preference number: 4 (lower is better)
Translates to: HAADEERGVFSPKSSKDSGNTSE*PQTTRL
Trigger: CAACCTCGTCGTCTGTGGCCACTCCGAGGTGTTGCC...GCTATCTTTGGATGACTTTGGAGAGAAGACTCCTCTCTCCTCGTCTGCGGCGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp GCACGCCTTGGTCTTGAATTCGGTGCTACGCTGACAGCTCTCCTTCTGAATGCAGGGCAGGGGCTGGCTTaGGGTTTGCATGTAGACAGC +
Preference number: 4 (lower is better)
Translates to: ARLGLEFGATLTALLLNAGQGLA*GLHVDS
Trigger: GCTGTCTACATGCAAACCCCAAGCCAGCCCCTGCCC...TGCATTCAGAAGGAGAGCTGTCAGCGTAGCACCGAATTCAAGACCAAGGCGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp TTTATGCGTGAGAAAACCAAGGCCCTGATGGTGTCCCTGGTCCAAGTCCAGTGCGGGCAGGGGCTGGCTTaGGGTTTGCATGTAGACAGC +
Preference number: 4 (lower is better)
Translates to: FMREKTKALMVSLVQVQCGQGLA*GLHVDS
Trigger: GCTGTCTACATGCAAACCCCAAGCCAGCCCCTGCCC...GCACTGGACTTGGACCAGGGACACCATCAGGGCCTTGGTTTTCTCACGCATAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp CACGCCGCAGACGAGGAGAGAGGAGTCTTCTCTCCAAAGTCATCCAAAGATAGCCCACCTCCTCAAAGGTaGTTGCCGGGGTGCAGAGCA +
Preference number: 4 (lower is better)
Translates to: HAADEERGVFSPKSSKDSPPPQR*LPGCRA
Trigger: TGCTCTGCACCCCGGCAACCACCTTTGAGGAGGTGG...GCTATCTTTGGATGACTTTGGAGAGAAGACTCCTCTCTCCTCGTCTGCGGCGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp TCGGCTTTCAAAAAGCTGTCAGCTCAGGTAGCACGCCTTGGTCTTGAATTCGGTCCAGGTAGGCTTGGATaGCCTCGAGGGGTGCCTGGG +
Preference number: 4 (lower is better)
Translates to: SAFKKLSAQVARLGLEFGPGRLG*PRGVPG
Trigger: CCCAGGCACCCCTCGAGGCCATCCAAGCCTACCTGG...ACCGAATTCAAGACCAAGGCGTGCTACCTGAGCTGACAGCTTTTTGAAAGCCGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp GCACCAGTCCATGATCAAGTCCACGCCGCAGACGAGGAGAGAGGAGTCTTCTCTAAGCCGACCTTTTTGTaGGGGGCGGGATCGTCTTCA +
Preference number: 4 (lower is better)
Translates to: APVHDQVHAADEERGVFSKPTFL*GAGSSS
Trigger: TGAAGACGATCCCGCCCCCCACAAAAAGGTCGGCTT...AGAGAAGACTCCTCTCTCCTCGTCTGCGGCGTGGACTTGATCATGGACTGGTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp ATCAAGTCCACGCCGCAGACGAGGAGAGAGGAGTCTTCTCTCCAAAGTCATCCATGCCCCGGTTCATCTTaGCAGGGTCAAGGGCCCAGT +
Preference number: 4 (lower is better)
Translates to: IKSTPQTRREESSLQSHPCPGSS*QGQGPS
Trigger: ACTGGGCCCTTGACCCTGCCAAGATGAACCGGGGCA...TGGATGACTTTGGAGAGAAGACTCCTCTCTCCTCGTCTGCGGCGTGGACTTGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp TCAAGTCCACGCCGCAGACGAGGAGAGAGGAGTCTTCTCTCCAAAGTCATCCAATCTGTGAAGATGGCGTaGCGCTCCAGGTCTGCCGTG +
Preference number: 4 (lower is better)
Translates to: SSPRRRRGERSLLSKVIQSVKMA*RSRSAV
Trigger: CACGGCAGACCTGGAGCGCCACGCCATCTTCACAGA...TTGGATGACTTTGGAGAGAAGACTCCTCTCTCCTCGTCTGCGGCGTGGACTTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp GCCAGCTCTGAGGTATCAAAGGAGCTCCGAGTGCAAGTTGAAGACTTCAGCAAGGCAGCCACAGGAGTGTaGGTTTCGGAGCCCTGCCTG +
Preference number: 4 (lower is better)
Translates to: ASSEVSKELRVQVEDFSKAATGV*VSEPCL
Trigger: CAGGCAGGGCTCCGAAACCCACACTCCTGTGGCTGC...CTTGCTGAAGTCTTCAACTTGCACTCGGAGCTCCTTTGATACCTCAGAGCTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp AGAGGTGTAAGCGTTTCAGTCCCAGATCGGCTACAGGGAGTGGCGCTCAGCTCCTTCTCAGCAGCCTGGTaGTGTCCAGGATCGACACAT +
Preference number: 4 (lower is better)
Translates to: RGVSVSVPDRLQGVALSSFSAAW*CPGSTH
Trigger: ATGTGTCGATCCTGGACACCACCAGGCTGCTGAGAA...GGAGCTGAGCGCCACTCCCTGTAGCCGATCTGGGACTGAAACGCTTACACCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR CCA 90 bp GCACCAGTCCATGATCAAGTCCACGCCGCAGACGAGGAGAGAGGAGTCTTCTCTCATCCAGCCAGCTCATaGTTCCAACGGGCTTCCATC +
Preference number: 4 (lower is better)
Translates to: APVHDQVHAADEERGVFSHPASS*FQRASI
Trigger: GATGGAAGCCCGTTGGAACCATGAGCTGGCTGGATG...AGAGAAGACTCCTCTCTCCTCGTCTGCGGCGTGGACTTGATCATGGACTGGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp GCACGCCTTGGTCTTGAATTCGGTGCTACGCTGACAGCTCTCCTTCTGAATGCAGCCACGCCTGGGGACTaGGCTTCAGGGTGTTTCTTG +
Preference number: 4 (lower is better)
Translates to: ARLGLEFGATLTALLLNAATPGD*ASGCFL
Trigger: CAAGAAACACCCTGAAGCCCAGTCCCCAGGCGTGGC...TGCATTCAGAAGGAGAGCTGTCAGCGTAGCACCGAATTCAAGACCAAGGCGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp TCAAGTCCACGCCGCAGACGAGGAGAGAGGAGTCTTCTCTCCAAAGTCATCCAATTCTTGCCAACTGTCTaGGCCCGGGAACAAGCACGG +
Preference number: 4 (lower is better)
Translates to: SSPRRRRGERSLLSKVIQFLPTV*AREQAR
Trigger: CCGTGCTTGTTCCCGGGCTCAGACAGTTGGCAAGAA...TTGGATGACTTTGGAGAGAAGACTCCTCTCTCCTCGTCTGCGGCGTGGACTTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp TCGGCTTTCAAAAAGCTGTCAGCTCAGGTAGCACGCCTTGGTCTTGAATTCGGTGGCAGGGCTGTGTCCTaGGGCCACGGGTTTGAAAGC +
Preference number: 4 (lower is better)
Translates to: SAFKKLSAQVARLGLEFGGRAVS*GHGFES
Trigger: GCTTTCAAACCCGTGGCCTCAGGACACAGCCCTGCC...ACCGAATTCAAGACCAAGGCGTGCTACCTGAGCTGACAGCTTTTTGAAAGCCGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp ACAGTGATGACAGGGCCATCTGAGGAACGGCCTGCAAGCCCGTGTGACTTGTGCGGAAATGAAGAGAGATaGTGGCGTGGAAGAACACGG +
Preference number: 4 (lower is better)
Translates to: TVMTGPSEERPASPCDLCGNEER*WRGRTR
Trigger: CCGTGTTCTTCCACGCCATCATCTCTCTTCATTTCC...GCACAAGTCACACGGGCTTGCAGGCCGTTCCTCAGATGGCCCTGTCATCACTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319921.4
CDS-3UTR TCA 90 bp GCCAGCTCTGAGGTATCAAAGGAGCTCCGAGTGCAAGTTGAAGACTTCAGCAAGAGGTGCTGTCCAGCATaGGCGCAGCGGCAATCTGCT +
Preference number: 4 (lower is better)
Translates to: ASSEVSKELRVQVEDFSKRCCPA*AQRQSA
Trigger: AGCAGATTGCCGCTGCGCTCATGCTGGACAGCACCT...CTTGCTGAAGTCTTCAACTTGCACTCGGAGCTCCTTTGATACCTCAGAGCTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp TTTCAGGCAGGGCATGGGGGACTCCTTCTGAGGCAGAGGTGTAAGCGTTTCAGTTCTGAGGTTAGGAGGTaGCACAACCAGTCCAGGCTG +
Preference number: 4 (lower is better)
Translates to: FQAGHGGLLLRQRCKRFSSEVRR*HNQSRL
Trigger: CAGCCTGGACTGGTTGTGTCACCTCCTAACCTCAGA...ACTGAAACGCTTACACCTCTGCCTCAGAAGGAGTCCCCCATGCCCTGCCTGAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR TCA 90 bp TTTATGCGTGAGAAAACCAAGGCCCTGATGGTGTCCCTGGTCCAAGTCCAGTGCTACAGCCGCCAGCTCTaGGGTATCCCAAGGATGTGG +
Preference number: 4 (lower is better)
Translates to: FMREKTKALMVSLVQVQCYSRQL*GIPRMW
Trigger: CCACATCCTTGGGATACCTCAGAGCTGGCGGCTGTA...GCACTGGACTTGGACCAGGGACACCATCAGGGCCTTGGTTTTCTCACGCATAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp CACGCCGCAGACGAGGAGAGAGGAGTCTTCTCTCCAAAGTCATCCAAAGATAGCTACAGCCGCCAGCTCTaGGGTATCCCAAGGATGTGG +
Preference number: 4 (lower is better)
Translates to: HAADEERGVFSPKSSKDSYSRQL*GIPRMW
Trigger: CCACATCCTTGGGATACCTCAGAGCTGGCGGCTGTA...GCTATCTTTGGATGACTTTGGAGAGAAGACTCCTCTCTCCTCGTCTGCGGCGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp ATTGTTTATGCCTGCAGAGGGGAGTGGGTGACTAGAGGGGAGGAGGATGATGGCAGTCAGGTAGGATGGTaGCAAGGCCTCCTCGGGAAT +
Preference number: 4 (lower is better)
Translates to: IVYACRGEWVTRGEEDDGSQVGW*QGLLGN
Trigger: ATTCCCGAGGAGGCCTTGTCACCATCCTACCTGACT...GCCATCATCCTCCTCCCCTCTAGTCACCCACTCCCCTCTGCAGGCATAAACAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319921.4
CDS-3UTR TCA 90 bp TTTCAGGCAGGGCATGGGGGACTCCTTCTGAGGCAGAGGTGTAAGCGTTTCAGTAGTCAGGTAGGATGGTaGCAAGGCCTCCTCGGGAAT +
Preference number: 4 (lower is better)
Translates to: FQAGHGGLLLRQRCKRFSSQVGW*QGLLGN
Trigger: ATTCCCGAGGAGGCCTTGTCACCATCCTACCTGACT...ACTGAAACGCTTACACCTCTGCCTCAGAAGGAGTCCCCCATGCCCTGCCTGAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR TCA 90 bp CTGGACTTCCCCTGTGGCCGCAAGGCTGTGCTTGTACAGGGGTTAAGTGTCCAAGACTGTGCAGCACACTaGGGAATCCGGAGAGAACTA +
Preference number: 4 (lower is better)
Translates to: LDFPCGRKAVLVQGLSVQDCAAH*GIRREL
Trigger: TAGTTCTCTCCGGATTCCTCAGTGTGCTGCACAGTC...TTGGACACTTAACCCCTGTACAAGCACAGCCTTGCGGCCACAGGGGAAGTCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319921.4
CDS-3UTR TCA 90 bp GCACCAGTCCATGATCAAGTCCACGCCGCAGACGAGGAGAGAGGAGTCTTCTCTACTGTGATCCTGTTGTaGAGCAGCTGCCTCAACCCA +
Preference number: 4 (lower is better)
Translates to: APVHDQVHAADEERGVFSTVILL*SSCLNP
Trigger: TGGGTTGAGGCAGCTGCTTCACAACAGGATCACAGT...AGAGAAGACTCCTCTCTCCTCGTCTGCGGCGTGGACTTGATCATGGACTGGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp TCAGCTCCACTGTGGAGTCGCCAGGATGCTGTCATTTTGTCCAGAGGAAAAGTCCCTGGAGGAAGCGGCTaGCGATCTGCCGCTGAATCT +
Preference number: 4 (lower is better)
Translates to: SAPLWSRQDAVILSRGKVPGGSG*RSAAES
Trigger: AGATTCAGCGGCAGATCGTCAGCCGCTTCCTCCAGG...GACTTTTCCTCTGGACAAAATGACAGCATCCTGGCGACTCCACAGTGGAGCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR TCA 90 bp GGGGTGGGCAGTGCCAGAGGCGAACGGGCACAGGTCATTACTGCGTGTGTGGCTCTTTGTACCTTGAACTaGTTTCCCCAAATGGCTCTT +
Preference number: 4 (lower is better)
Translates to: GVGSARGERAQVITACVALCTLN*FPQMAL
Trigger: AAGAGCCATTTGGGGAAATCAGTTCAAGGTACAAAG...AGCCACACACGCAGTAATGACCTGTGCCCGTTCGCCTCTGGCACTGCCCACCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp TTTCAGGCAGGGCATGGGGGACTCCTTCTGAGGCAGAGGTGTAAGCGTTTCAGTAGCTGTTTTCCACACTaGGACACAGCTGGCGAGCAG +
Preference number: 4 (lower is better)
Translates to: FQAGHGGLLLRQRCKRFSSCFPH*DTAGEQ
Trigger: CTGCTCGCCAGCTGTGTCTCAGTGTGGAAAACAGCT...ACTGAAACGCTTACACCTCTGCCTCAGAAGGAGTCCCCCATGCCCTGCCTGAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR TCA 90 bp TTTATGCGTGAGAAAACCAAGGCCCTGATGGTGTCCCTGGTCCAAGTCCAGTGCCCTGACAGCCAGCTCTaGGGTATCAAAGGAGCTCCG +
Preference number: 4 (lower is better)
Translates to: FMREKTKALMVSLVQVQCPDSQL*GIKGAP
Trigger: CGGAGCTCCTTTGATACCTCAGAGCTGGCTGTCAGG...GCACTGGACTTGGACCAGGGACACCATCAGGGCCTTGGTTTTCTCACGCATAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp GCACGCCTTGGTCTTGAATTCGGTGCTACGCTGACAGCTCTCCTTCTGAATGCACCCGGACCCAGCAGATaGACTCCTTTCTCAGGGACA +
Preference number: 4 (lower is better)
Translates to: ARLGLEFGATLTALLLNAPGPSR*TPFSGT
Trigger: TGTCCCTGAGAAAGGAGTTCATCTGCTGGGTCCGGG...TGCATTCAGAAGGAGAGCTGTCAGCGTAGCACCGAATTCAAGACCAAGGCGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp TTTATGCGTGAGAAAACCAAGGCCCTGATGGTGTCCCTGGTCCAAGTCCAGTGCAGCACGGGGACCTTCTaGTACTGCGCATCCAGGAAG +
Preference number: 4 (lower is better)
Translates to: FMREKTKALMVSLVQVQCSTGTF*YCASRK
Trigger: CTTCCTGGATGCGCAGTATCAGAAGGTCCCCGTGCT...GCACTGGACTTGGACCAGGGACACCATCAGGGCCTTGGTTTTCTCACGCATAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp GCCAGCTCTGAGGTATCAAAGGAGCTCCGAGTGCAAGTTGAAGACTTCAGCAAGGAGGTCACGTCCAGGTaGAAGAGCACGGGGACCTTC +
Preference number: 4 (lower is better)
Translates to: ASSEVSKELRVQVEDFSKEVTSR*KSTGTF
Trigger: GAAGGTCCCCGTGCTCTTTCACCTGGACGTGACCTC...CTTGCTGAAGTCTTCAACTTGCACTCGGAGCTCCTTTGATACCTCAGAGCTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp GCACCAGTCCATGATCAAGTCCACGCCGCAGACGAGGAGAGAGGAGTCTTCTCTTTCCTCCGTGCACCTTaGCCAGCTTTATGGTGTCAG +
Preference number: 4 (lower is better)
Translates to: APVHDQVHAADEERGVFSFLRAP*PALWCQ
Trigger: CTGACACCATAAAGCTGGTCAAGGTGCACGGAGGAA...AGAGAAGACTCCTCTCTCCTCGTCTGCGGCGTGGACTTGATCATGGACTGGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp TTTCAGGCAGGGCATGGGGGACTCCTTCTGAGGCAGAGGTGTAAGCGTTTCAGTGGACGTAGTACTGGTTaGGTGCGTCGTAGAGGCTCT +
Preference number: 4 (lower is better)
Translates to: FQAGHGGLLLRQRCKRFSGRSTG*VRRRGS
Trigger: AGAGCCTCTACGACGCACTCAACCAGTACTACGTCC...ACTGAAACGCTTACACCTCTGCCTCAGAAGGAGTCCCCCATGCCCTGCCTGAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR TCA 90 bp TCGGCTTTCAAAAAGCTGTCAGCTCAGGTAGCACGCCTTGGTCTTGAATTCGGTGGTGAACCCGACATTTaGCGCGGTGGGTCCCCAGAC +
Preference number: 4 (lower is better)
Translates to: SAFKKLSAQVARLGLEFGGEPDI*RGGSPD
Trigger: GTCTGGGGACCCACCGCGTCAAATGTCGGGTTCACC...ACCGAATTCAAGACCAAGGCGTGCTACCTGAGCTGACAGCTTTTTGAAAGCCGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp GCCAGCTCTGAGGTATCAAAGGAGCTCCGAGTGCAAGTTGAAGACTTCAGCAAGGCGTCTGTGATGTACTaGGCCTGGACCCACAGCTCC +
Preference number: 4 (lower is better)
Translates to: ASSEVSKELRVQVEDFSKASVMY*AWTHSS
Trigger: GGAGCTGTGGGTCCAGGCTCAGTACATCACAGACGC...CTTGCTGAAGTCTTCAACTTGCACTCGGAGCTCCTTTGATACCTCAGAGCTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp TCAAGTCCACGCCGCAGACGAGGAGAGAGGAGTCTTCTCTCCAAAGTCATCCAAGTCCTTCTGCGTCTGTaGTGTACTGAGCCTGGACCC +
Preference number: 4 (lower is better)
Translates to: SSPRRRRGERSLLSKVIQVLLRL*CTEPGP
Trigger: GGGTCCAGGCTCAGTACATCACAGACGCAGAAGGAC...TTGGATGACTTTGGAGAGAAGACTCCTCTCTCCTCGTCTGCGGCGTGGACTTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp GGGGAGTCTAAAACCAGCTGTAACCAAGTGTCTGTGTACGGGAACTGGTGTGGGTTCCTCGGGCGCTTCTaGCGCCGCTTTCAGTTTCCT +
Preference number: 4 (lower is better)
Translates to: GESKTSCNQVSVYGNWCGFLGRF*RRFQFP
Trigger: AGGAAACTGAAAGCGGCGTCAGAAGCGCCCGAGGAA...CCCACACCAGTTCCCGTACACAGACACTTGGTTACAGCTGGTTTTAGACTCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR TCA 90 bp GCACGCCTTGGTCTTGAATTCGGTGCTACGCTGACAGCTCTCCTTCTGAATGCACAGATGGAGCACGGCTaGATCCCAAACCTGCTGAGG +
Preference number: 4 (lower is better)
Translates to: ARLGLEFGATLTALLLNAQMEHG*IPNLLR
Trigger: CCTCAGCAGGTTTGGGATTCAGCCGTGCTCCATCTG...TGCATTCAGAAGGAGAGCTGTCAGCGTAGCACCGAATTCAAGACCAAGGCGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp GCACGCCTTGGTCTTGAATTCGGTGCTACGCTGACAGCTCTCCTTCTGAATGCAGGCTGTCCTCTGGGTTaGGGTTCTGTTGCGCTTCAG +
Preference number: 4 (lower is better)
Translates to: ARLGLEFGATLTALLLNAGCPLG*GSVALQ
Trigger: CTGAAGCGCAACAGAACCTCAACCCAGAGGACAGCC...TGCATTCAGAAGGAGAGCTGTCAGCGTAGCACCGAATTCAAGACCAAGGCGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR GCA 90 bp ACAGTGATGACAGGGCCATCTGAGGAACGGCCTGCAAGCCCGTGTGACTTGTGCGAGTCGCTGGCAGCCTaGTATATACTACATGTCCTG +
Preference number: 4 (lower is better)
Translates to: TVMTGPSEERPASPCDLCESLAA*YILHVL
Trigger: CAGGACATGTAGTATATAGCAGGCTGCCAGCGACTC...GCACAAGTCACACGGGCTTGCAGGCCGTTCCTCAGATGGCCCTGTCATCACTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319921.4
CDS-3UTR GCA 90 bp CACGCCGCAGACGAGGAGAGAGGAGTCTTCTCTCCAAAGTCATCCAAAGATAGCCTGCTGGGACTGCCCTaGAGATCCAGAAGCAAGAGC +
Preference number: 4 (lower is better)
Translates to: HAADEERGVFSPKSSKDSLLGLP*RSRSKS
Trigger: GCTCTTGCTTCTGGATCTGCAGGGCAGTCCCAGCAG...GCTATCTTTGGATGACTTTGGAGAGAAGACTCCTCTCTCCTCGTCTGCGGCGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp ATTGTTTATGCCTGCAGAGGGGAGTGGGTGACTAGAGGGGAGGAGGATGATGGCTCTCTCCGCACTGGCTaGAGAACTTGGGGGTTTCCT +
Preference number: 4 (lower is better)
Translates to: IVYACRGEWVTRGEEDDGSLRTG*RTWGFP
Trigger: AGGAAACCCCCAAGTTCTGCAGCCAGTGCGGAGAGA...GCCATCATCCTCCTCCCCTCTAGTCACCCACTCCCCTCTGCAGGCATAAACAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000319921.4
CDS-3UTR GCA 90 bp GGGCAGCCGTGGCCAGCAGGGAGCTTCCTCATGTGGCATTGCCTGCGAGACTGTTCCTTTTCTTCTTTTTaGTTTCTTGGACGGTCCAGG +
Preference number: 4 (lower is better)
Translates to: GQPWPAGSFLMWHCLRDCSFSSF*FLGRSR
Trigger: CCTGGACCGTCCAAGAAAGCAAAAAGAAGAAAAGGA...ACAGTCTCGCAGGCAATGCCACATGAGGAAGCTCCCTGCTGGCCACGGCTGCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000319921.4
CDS-3UTR GCA 90 bp CACGCCGCAGACGAGGAGAGAGGAGTCTTCTCTCCAAAGTCATCCAAAGATAGCCCTGGAATTGCGGGCTaGTCTGAGCCTCACTTCCTG +
Preference number: 4 (lower is better)
Translates to: HAADEERGVFSPKSSKDSPGIAG*SEPHFL
Trigger: CAGGAAGTGAGGCTCAGAGCAGCCCGCAATTCCAGG...GCTATCTTTGGATGACTTTGGAGAGAAGACTCCTCTCTCCTCGTCTGCGGCGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp TCAAGTCCACGCCGCAGACGAGGAGAGAGGAGTCTTCTCTCCAAAGTCATCCAATGTTGCTCGGTGGTCTaGAGTTCTGTCCCGGGCTCA +
Preference number: 4 (lower is better)
Translates to: SSPRRRRGERSLLSKVIQCCSVV*SSVPGS
Trigger: TGAGCCCGGGACAGAACTGCAGACCACCGAGCAACA...TTGGATGACTTTGGAGAGAAGACTCCTCTCTCCTCGTCTGCGGCGTGGACTTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp CACGCCGCAGACGAGGAGAGAGGAGTCTTCTCTCCAAAGTCATCCAAAGATAGCCCCGGCCCCTTTAACTaGATTGGCTGGCTCAGCTAC +
Preference number: 4 (lower is better)
Translates to: HAADEERGVFSPKSSKDSPGPFN*IGWLSY
Trigger: GTAGCTGAGCCAGCCAATGCAGTTAAAGGGGCCGGG...GCTATCTTTGGATGACTTTGGAGAGAAGACTCCTCTCTCCTCGTCTGCGGCGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp ACAGTGATGACAGGGCCATCTGAGGAACGGCCTGCAAGCCCGTGTGACTTGTGCCAGGCAAAAAGTCCGTaGTTTTTCCGTCCGGCAATG +
Preference number: 4 (lower is better)
Translates to: TVMTGPSEERPASPCDLCQAKSP*FFRPAM
Trigger: CATTGCCGGACGGAAAAAGCACGGACTTTTTGCCTG...GCACAAGTCACACGGGCTTGCAGGCCGTTCCTCAGATGGCCCTGTCATCACTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000319921.4
CDS-3UTR GCA 90 bp TCAGCAAGCCAGCCCCCGGCCCCCACACCCGTTCATAGGCAGTCGGAATGCAGAGGAAAACGACCCAGGTaGTCAATGAAGTTTTCCATA +
Preference number: 4 (lower is better)
Translates to: SASQPPAPTPVHRQSECRGKRPR*SMKFSI
Trigger: TATGGAAAACTTCATTGAGCACCTGGGTCGTTTTCC...TCTGCATTCCGACTGCCTATGAACGGGTGTGGGGGCCGGGGGCTGGCTTGCTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp ATTGTTTATGCCTGCAGAGGGGAGTGGGTGACTAGAGGGGAGGAGGATGATGGCGACTCCTTCCAGCCATaGTCCGCGGGGAATTGGATT +
Preference number: 4 (lower is better)
Translates to: IVYACRGEWVTRGEEDDGDSFQP*SAGNWI
Trigger: AATCCAATTCCCCGCGGAGCATGGCTGGAAGGAGTC...GCCATCATCCTCCTCCCCTCTAGTCACCCACTCCCCTCTGCAGGCATAAACAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000319921.4
CDS-3UTR GCA 90 bp ACAGTGATGACAGGGCCATCTGAGGAACGGCCTGCAAGCCCGTGTGACTTGTGCTCCATATGGAACACATaGAGGATGGTGCGAGCAGCA +
Preference number: 4 (lower is better)
Translates to: TVMTGPSEERPASPCDLCSIWNT*RMVRAA
Trigger: TGCTGCTCGCACCATCCTGCATGTGTTCCATATGGA...GCACAAGTCACACGGGCTTGCAGGCCGTTCCTCAGATGGCCCTGTCATCACTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319921.4
CDS-3UTR GCA 90 bp ATTGTTTATGCCTGCAGAGGGGAGTGGGTGACTAGAGGGGAGGAGGATGATGGCTCTTTCAAAACATTATaGTCGGCCGGGCGCGGTGGC +
Preference number: 4 (lower is better)
Translates to: IVYACRGEWVTRGEEDDGSFKTL*SAGRGG
Trigger: GCCACCGCGCCCGGCCGAGCATAATGTTTTGAAAGA...GCCATCATCCTCCTCCCCTCTAGTCACCCACTCCCCTCTGCAGGCATAAACAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000319921.4
CDS-3UTR GCA 90 bp TTCCAGCAGGGTCTCAAAGGAAGTAATGGGCATAAATCAAAAGGCGCTGCTGATGGAAACACCCACTGGTaGGGGCGGCCGGGCTTGGAG +
Preference number: 4 (lower is better)
Translates to: FQQGLKGSNGHKSKGAADGNTHW*GRPGLE
Trigger: CTCCAAGCCCGGCCGCCCGCACCAGTGGGTGTTTCC...ATCAGCAGCGCCTTTTGATTTATGCCCATTACTTCCTTTGAGACCCTGCTGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000573038.1
CDS-3UTR GCA 90 bp GCCAGCTCTGAGGTATCAAAGGAGCTCCGAGTGCAAGTTGAAGACTTCAGCAAGTGCCGCAGCCCCTGCTaGTTGACAACGTCCTTGGGA +
Preference number: 4 (lower is better)
Translates to: ASSEVSKELRVQVEDFSKCRSPC*LTTSLG
Trigger: TCCCAAGGACGTTGTCAAGCAGCAGGGGCTGCGGCA...CTTGCTGAAGTCTTCAACTTGCACTCGGAGCTCCTTTGATACCTCAGAGCTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp CACGCCGCAGACGAGGAGAGAGGAGTCTTCTCTCCAAAGTCATCCAAAGATAGCAGCACGTGGCCGGTCTaGGTTCTGTCTGCCTTGTCT +
Preference number: 4 (lower is better)
Translates to: HAADEERGVFSPKSSKDSSTWPV*VLSALS
Trigger: AGACAAGGCAGACAGAACGCAGACCGGCCACGTGCT...GCTATCTTTGGATGACTTTGGAGAGAAGACTCCTCTCTCCTCGTCTGCGGCGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp TTCCAAAGACCAGTCTTACCAAGTTTCAGATGTCTGGACTCCAAGTGGCAGTTCCTCTCCGCTGCGGGTTaGCCAGCACGTGGCCGGTCT +
Preference number: 4 (lower is better)
Translates to: FQRPVLPSFRCLDSKWQFLSAAG*PARGRS
Trigger: AGACCGGCCACGTGCTGGGCAACCCGCAGCGGAGAG...GAACTGCCACTTGGAGTCCAGACATCTGAAACTTGGTAAGACTGGTCTTTGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR GCA 90 bp TCAGCAAGCCAGCCCCCGGCCCCCACACCCGTTCATAGGCAGTCGGAATGCAGATTCTGTTCCACAATGTaGTGGAGGTACTCAACTGTA +
Preference number: 4 (lower is better)
Translates to: SASQPPAPTPVHRQSECRFCSTM*WRYSTV
Trigger: TACAGTTGAGTACCTCCAGCACATTGTGGAACAGAA...TCTGCATTCCGACTGCCTATGAACGGGTGTGGGGGCCGGGGGCTGGCTTGCTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp TCAAGTCCACGCCGCAGACGAGGAGAGAGGAGTCTTCTCTCCAAAGTCATCCAAGCGCTGCTCAAGGTGTaGATGGCTGAGTCCTGGACA +
Preference number: 4 (lower is better)
Translates to: SSPRRRRGERSLLSKVIQALLKV*MAESWT
Trigger: TGTCCAGGACTCAGCCATGCACACCTTGAGCAGCGC...TTGGATGACTTTGGAGAGAAGACTCCTCTCTCCTCGTCTGCGGCGTGGACTTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp TCAAGTCCACGCCGCAGACGAGGAGAGAGGAGTCTTCTCTCCAAAGTCATCCAAGGCCTCAAGCGGGGCTaGATCCTGCTTCCTTCTCTT +
Preference number: 4 (lower is better)
Translates to: SSPRRRRGERSLLSKVIQGLKRG*ILLPSL
Trigger: AAGAGAAGGAAGCAGGATGCAGCCCCGCTTGAGGCC...TTGGATGACTTTGGAGAGAAGACTCCTCTCTCCTCGTCTGCGGCGTGGACTTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508628.6
CDS-3UTR GCA 90 bp AGCTCCGAGTGCAAGTTGAAGACTTCAGCAAGCCAGCCCCCGGCCCCCACACCCTCCTTTTCTTCTTTTTaGTCTGCTCACAGTCTGCAG +
Preference number: 4 (lower is better)
Translates to: SSECKLKTSASQPPAPTPSFSSF*SAHSLQ
Trigger: CTGCAGACTGTGAGCAGAGCAAAAAGAAGAAAAGGA...GGGTGTGGGGGCCGGGGGCTGGCTTGCTGAAGTCTTCAACTTGCACTCGGAGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000508628.6
CDS-3UTR GCA 90 bp TTTATGCGTGAGAAAACCAAGGCCCTGATGGTGTCCCTGGTCCAAGTCCAGTGCCAAGATGACCTTGGCTaGGTGGACAGCCTGGTGCAG +
Preference number: 4 (lower is better)
Translates to: FMREKTKALMVSLVQVQCQDDLG*VDSLVQ
Trigger: CTGCACCAGGCTGTCCACGCAGCCAAGGTCATCTTG...GCACTGGACTTGGACCAGGGACACCATCAGGGCCTTGGTTTTCTCACGCATAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp GCACCAGTCCATGATCAAGTCCACGCCGCAGACGAGGAGAGAGGAGTCTTCTCTAGGCTCTCTTTGACCTaGAAGATGACCTTGGCTGCG +
Preference number: 4 (lower is better)
Translates to: APVHDQVHAADEERGVFSRLSLT*KMTLAA
Trigger: CGCAGCCAAGGTCATCTTGCAGGTCAAAGAGAGCCT...AGAGAAGACTCCTCTCTCCTCGTCTGCGGCGTGGACTTGATCATGGACTGGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp CACTGGTGGCACCATGACAGTGAGGAGAACGGAGCACAGTTCCTTCCGTGCCTCCAGATGCTTCATGAATaGACTGAAGTCCACGCTGGG +
Preference number: 4 (lower is better)
Translates to: HWWHHDSEENGAQFLPCLQMLHE*TEVHAG
Trigger: CCCAGCGTGGACTTCAGTGCATTCATGAAGCATCTG...GAGGCACGGAAGGAACTGTGCTCCGTTCTCCTCACTGTCATGGTGCCACCAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp GCACGCCTTGGTCTTGAATTCGGTGCTACGCTGACAGCTCTCCTTCTGAATGCAGCCTGGCTGAGCCTCTaGACACTGCAGAAGACCTCT +
Preference number: 4 (lower is better)
Translates to: ARLGLEFGATLTALLLNAAWLSL*TLQKTS
Trigger: AGAGGTCTTCTGCAGTGTGCAGAGGCTCAGCCAGGC...TGCATTCAGAAGGAGAGCTGTCAGCGTAGCACCGAATTCAAGACCAAGGCGTGC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp ATCAAGTCCACGCCGCAGACGAGGAGAGAGGAGTCTTCTCTCCAAAGTCATCCAGTCATTGAACACGGCTaGCGCCGACAGGGTCTGCTT +
Preference number: 4 (lower is better)
Translates to: IKSTPQTRREESSLQSHPVIEHG*RRQGLL
Trigger: AAGCAGACCCTGTCGGCGGCAGCCGTGTTCAATGAC...TGGATGACTTTGGAGAGAAGACTCCTCTCTCCTCGTCTGCGGCGTGGACTTGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp CACTGGTGGCACCATGACAGTGAGGAGAACGGAGCACAGTTCCTTCCGTGCCTCCCGTTGATGTTGGGCTaGAGATGGAAGCCGATGAAT +
Preference number: 4 (lower is better)
Translates to: HWWHHDSEENGAQFLPCLPLMLG*RWKPMN
Trigger: ATTCATCGGCTTCCATCTGCAGCCCAACATCAACGG...GAGGCACGGAAGGAACTGTGCTCCGTTCTCCTCACTGTCATGGTGCCACCAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp CACGCCGCAGACGAGGAGAGAGGAGTCTTCTCTCCAAAGTCATCCAAAGATAGCTCGATGTGGACAGACTaGCACAGCCCTCCGTGGAAG +
Preference number: 4 (lower is better)
Translates to: HAADEERGVFSPKSSKDSSMWTD*HSPPWK
Trigger: CTTCCACGGAGGGCTGTGGCAGTCTGTCCACATCGA...GCTATCTTTGGATGACTTTGGAGAGAAGACTCCTCTCTCCTCGTCTGCGGCGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp TCAAGTCCACGCCGCAGACGAGGAGAGAGGAGTCTTCTCTCCAAAGTCATCCAAGTTCCTAGGAGCACGTaGTCCACGAAGAGTGCGGTG +
Preference number: 4 (lower is better)
Translates to: SSPRRRRGERSLLSKVIQVPRST*STKSAV
Trigger: CACCGCACTCTTCGTGGAGCACGTGCTCCTAGGAAC...TTGGATGACTTTGGAGAGAAGACTCCTCTCTCCTCGTCTGCGGCGTGGACTTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp TCAAGTCCACGCCGCAGACGAGGAGAGAGGAGTCTTCTCTCCAAAGTCATCCAAACTGGGGCAATTGCCTaGCTGAGAGCGCTCTCAGGA +
Preference number: 4 (lower is better)
Translates to: SSPRRRRGERSLLSKVIQTGAIA*LRALSG
Trigger: TCCTGAGAGCGCTCTCAGGCAGGCAATTGCCCCAGT...TTGGATGACTTTGGAGAGAAGACTCCTCTCTCCTCGTCTGCGGCGTGGACTTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR GCA 90 bp CACTGGTGGCACCATGACAGTGAGGAGAACGGAGCACAGTTCCTTCCGTGCCTCTCTGCCAGCCACTTATaGTGCTGTTCTCTCAACCAC +
Preference number: 4 (lower is better)
Translates to: HWWHHDSEENGAQFLPCLSASHL*CCSLNH
Trigger: GTGGTTGAGAGAACAGCAGCATAAGTGGCTGGCAGA...GAGGCACGGAAGGAACTGTGCTCCGTTCTCCTCACTGTCATGGTGCCACCAGTG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR CCA 90 bp CAGATCTCGGTGGCAGGTGGCTCTGCACAGTCCAGAGTGATAAAACAATCACAGACGAAGGACACTCCATaGGTCCTGCTGGGACTGCCC +
Preference number: 4 (lower is better)
Translates to: QISVAGGSAQSRVIKQSQTKDTP*VLLGLP
Trigger: GGGCAGTCCCAGCAGGACCCATGGAGTGTCCTTCGT...CTGTGATTGTTTTATCACTCTGGACTGTGCAGAGCCACCTGCCACCGAGATCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp TCGGCTTTCAAAAAGCTGTCAGCTCAGGTAGCACGCCTTGGTCTTGAATTCGGTGGGATGGAAGCGTCCTaGTCCTCCCCTTCCGTGTGG +
Preference number: 4 (lower is better)
Translates to: SAFKKLSAQVARLGLEFGGMEAS*SSPSVW
Trigger: CCACACGGAAGGGGAGGACCAGGACGCTTCCATCCC...ACCGAATTCAAGACCAAGGCGTGCTACCTGAGCTGACAGCTTTTTGAAAGCCGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp TCAGCTCCACTGTGGAGTCGCCAGGATGCTGTCATTTTGTCCAGAGGAAAAGTCCTGCCTGTTGCTCGGTaGTCTGCAGTTCTGTCCCGG +
Preference number: 4 (lower is better)
Translates to: SAPLWSRQDAVILSRGKVLPVAR*SAVLSR
Trigger: CCGGGACAGAACTGCAGACCACCGAGCAACAGGCAG...GACTTTTCCTCTGGACAAAATGACAGCATCCTGGCGACTCCACAGTGGAGCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR CCA 90 bp CTGGACTTCCCCTGTGGCCGCAAGGCTGTGCTTGTACAGGGGTTAAGTGTCCAACAGCCATCTCGTCCTTaGTCTTGGTCTCAGCTTCCT +
Preference number: 4 (lower is better)
Translates to: LDFPCGRKAVLVQGLSVQQPSRP*SWSQLP
Trigger: AGGAAGCTGAGACCAAGACCAAGGACGAGATGGCTG...TTGGACACTTAACCCCTGTACAAGCACAGCCTTGCGGCCACAGGGGAAGTCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319921.4
CDS-3UTR CCA 90 bp GGAGAACGGAGCACAGTTCCTTCCGTGCCTCCTGCCGGCGCTGCTCAAGGTGTGCTGATGAAGACTTTATaGAGGTCAGGATTGAATGGG +
Preference number: 4 (lower is better)
Translates to: GERSTVPSVPPAGAAQGVLMKTL*RSGLNG
Trigger: CCCATTCAATCCTGACCTCCATAAAGTCTTCATCAG...CACACCTTGAGCAGCGCCGGCAGGAGGCACGGAAGGAACTGTGCTCCGTTCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp ACAGTGATGACAGGGCCATCTGAGGAACGGCCTGCAAGCCCGTGTGACTTGTGCGGCCCGTCTGTGATGTaGTTCATGACTTTCTGGAGT +
Preference number: 4 (lower is better)
Translates to: TVMTGPSEERPASPCDLCGPSVM*FMTFWS
Trigger: ACTCCAGAAAGTCATGAACCACATCACAGACGGGCC...GCACAAGTCACACGGGCTTGCAGGCCGTTCCTCAGATGGCCCTGTCATCACTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319921.4
CDS-3UTR CCA 90 bp ACCACAGAAAGGACTAGATATTCATACATGCGAGAGCACACTGAGACTGCATGTCAACCGAGGCCTCGTTaGCAGGCTCTCGGCCCCGGC +
Preference number: 4 (lower is better)
Translates to: TTERTRYSYMREHTETACQPRPR*QALGPG
Trigger: GCCGGGGCCGAGAGCCTGCCAACGAGGCCTCGGTTG...ACATGCAGTCTCAGTGTGCTCTCGCATGTATGAATATCTAGTCCTTTCTGTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp TGCACTTTCCTGGCGCTTGTTTTTCCAGCTGGAAACGGGATTCGTAATGGTAATTCCATCTGGCCTGGGTaGTCCTGCCGCAGCCCCTGC +
Preference number: 4 (lower is better)
Translates to: CTFLALVFPAGNGIRNGNSIWPG*SCRSPC
Trigger: GCAGGGGCTGCGGCAGGACCACCCAGGCCAGATGGA...ATTACCATTACGAATCCCGTTTCCAGCTGGAAAAACAAGCGCCAGGAAAGTGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR CCA 90 bp CAGATCTCGGTGGCAGGTGGCTCTGCACAGTCCAGAGTGATAAAACAATCACAGGCTGACTGCTGGCTTTaGGGGGTCTTGCAGGCCTTC +
Preference number: 4 (lower is better)
Translates to: QISVAGGSAQSRVIKQSQADCWL*GVLQAF
Trigger: GAAGGCCTGCAAGACCCCCCAAAGCCAGCAGTCAGC...CTGTGATTGTTTTATCACTCTGGACTGTGCAGAGCCACCTGCCACCGAGATCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp TCAAGTCCACGCCGCAGACGAGGAGAGAGGAGTCTTCTCTCCAAAGTCATCCAACCGTCCCGAGGTTTGTaGTCAATGCCTCCAATCGGC +
Preference number: 4 (lower is better)
Translates to: SSPRRRRGERSLLSKVIQPSRGL*SMPPIG
Trigger: GCCGATTGGAGGCATTGACCACAAACCTCGGGACGG...TTGGATGACTTTGGAGAGAAGACTCCTCTCTCCTCGTCTGCGGCGTGGACTTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp CACTGGTGGCACCATGACAGTGAGGAGAACGGAGCACAGTTCCTTCCGTGCCTCCTGCAGAAAGCCTTTTaGATCCCTCACTGGAGGCTT +
Preference number: 4 (lower is better)
Translates to: HWWHHDSEENGAQFLPCLLQKAF*IPHWRL
Trigger: AAGCCTCCAGTGAGGGATCCAAAAGGCTTTCTGCAG...GAGGCACGGAAGGAACTGTGCTCCGTTCTCCTCACTGTCATGGTGCCACCAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp ATCAAGTCCACGCCGCAGACGAGGAGAGAGGAGTCTTCTCTCCAAAGTCATCCACTGCCCTCCTCCACCTaGTACTGGCAGTTGGAGAGA +
Preference number: 4 (lower is better)
Translates to: IKSTPQTRREESSLQSHPLPSST*YWQLER
Trigger: TCTCTCCAACTGCCAGTACCAGGTGGAGGAGGGCAG...TGGATGACTTTGGAGAGAAGACTCCTCTCTCCTCGTCTGCGGCGTGGACTTGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp ATCAAGTCCACGCCGCAGACGAGGAGAGAGGAGTCTTCTCTCCAAAGTCATCCAGATCTCGGTGGCAGGTaGCTCTGCACAGTCCAGAGT +
Preference number: 4 (lower is better)
Translates to: IKSTPQTRREESSLQSHPDLGGR*LCTVQS
Trigger: ACTCTGGACTGTGCAGAGCCACCTGCCACCGAGATC...TGGATGACTTTGGAGAGAAGACTCCTCTCTCCTCGTCTGCGGCGTGGACTTGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp GCACGCCTTGGTCTTGAATTCGGTGCTACGCTGACAGCTCTCCTTCTGAATGCAGCGAGTTCGAGGAGGTaGACAGTCTCACTGTCACGG +
Preference number: 4 (lower is better)
Translates to: ARLGLEFGATLTALLLNAASSRR*TVSLSR
Trigger: CCGTGACAGTGAGACTGTCCACCTCCTCGAACTCGC...TGCATTCAGAAGGAGAGCTGTCAGCGTAGCACCGAATTCAAGACCAAGGCGTGC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp TTTATGCGTGAGAAAACCAAGGCCCTGATGGTGTCCCTGGTCCAAGTCCAGTGCGCCTCGCTGATGTCCTaGAGCAGCTTTTTGGCCTGG +
Preference number: 4 (lower is better)
Translates to: FMREKTKALMVSLVQVQCASLMS*SSFLAW
Trigger: CCAGGCCAAAAAGCTGCTCCAGGACATCAGCGAGGC...GCACTGGACTTGGACCAGGGACACCATCAGGGCCTTGGTTTTCTCACGCATAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp ATCAAGTCCACGCCGCAGACGAGGAGAGAGGAGTCTTCTCTCCAAAGTCATCCAAGGTCGATGAAGGCCTaGCTGAGCCTCTGCACACTG +
Preference number: 4 (lower is better)
Translates to: IKSTPQTRREESSLQSHPRSMKA*LSLCTL
Trigger: CAGTGTGCAGAGGCTCAGCCAGGCCTTCATCGACCT...TGGATGACTTTGGAGAGAAGACTCCTCTCTCCTCGTCTGCGGCGTGGACTTGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp AGAAACAGCTCGGCTTTCAAAAAGCTGTCAGCTCAGGTAGCACGCCTTGGTCTTCACAGACGACGAGGTTaGGCTGGCCGACCTGCAGAC +
Preference number: 4 (lower is better)
Translates to: RNSSAFKKLSAQVARLGLHRRRG*AGRPAD
Trigger: GTCTGCAGGTCGGCCAGCCCAACCTCGTCGTCTGTG...AAGACCAAGGCGTGCTACCTGAGCTGACAGCTTTTTGAAAGCCGAGCTGTTTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp GCACGCCTTGGTCTTGAATTCGGTGCTACGCTGACAGCTCTCCTTCTGAATGCAACGAAGACCTTGTGCTaGCTGAAGGCAGAGGGGAGG +
Preference number: 4 (lower is better)
Translates to: ARLGLEFGATLTALLLNATKTLC*LKAEGR
Trigger: CCTCCCCTCTGCCTTCAGCCAGCACAAGGTCTTCGT...TGCATTCAGAAGGAGAGCTGTCAGCGTAGCACCGAATTCAAGACCAAGGCGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp CAGATCTCGGTGGCAGGTGGCTCTGCACAGTCCAGAGTGATAAAACAATCACAGTGGAGCAGCAGGCCCTaGTACAGGTCCCTGGTCATG +
Preference number: 4 (lower is better)
Translates to: QISVAGGSAQSRVIKQSQWSSRP*YRSLVM
Trigger: CATGACCAGGGACCTGTACCAGGGCCTGCTGCTCCA...CTGTGATTGTTTTATCACTCTGGACTGTGCAGAGCCACCTGCCACCGAGATCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp CACTGGTGGCACCATGACAGTGAGGAGAACGGAGCACAGTTCCTTCCGTGCCTCATCGCGCTGTGCTCGTaGAACCACCTGAAAACTTTC +
Preference number: 4 (lower is better)
Translates to: HWWHHDSEENGAQFLPCLIALCS*NHLKTF
Trigger: GAAAGTTTTCAGGTGGTTCCACGAGCACAGCGCGAT...GAGGCACGGAAGGAACTGTGCTCCGTTCTCCTCACTGTCATGGTGCCACCAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp CACGCCGCAGACGAGGAGAGAGGAGTCTTCTCTCCAAAGTCATCCAAAGATAGCTGGCGTCTGCCACGATaGTCTTGGCGAGAGACTTGG +
Preference number: 4 (lower is better)
Translates to: HAADEERGVFSPKSSKDSWRLPR*SWRETW
Trigger: CCAAGTCTCTCGCCAAGACCATCGTGGCAGACGCCA...GCTATCTTTGGATGACTTTGGAGAGAAGACTCCTCTCTCCTCGTCTGCGGCGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp TTTATGCGTGAGAAAACCAAGGCCCTGATGGTGTCCCTGGTCCAAGTCCAGTGCCGGAGGTCATCGATGTaGACAGACTGCCACAGCCCT +
Preference number: 4 (lower is better)
Translates to: FMREKTKALMVSLVQVQCRRSSM*TDCHSP
Trigger: AGGGCTGTGGCAGTCTGTCCACATCGATGACCTCCG...GCACTGGACTTGGACCAGGGACACCATCAGGGCCTTGGTTTTCTCACGCATAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp TCGGCTTTCAAAAAGCTGTCAGCTCAGGTAGCACGCCTTGGTCTTGAATTCGGTGGGGTGACAGCACCTTaGACCCGCTTCCAGAGGGTG +
Preference number: 4 (lower is better)
Translates to: SAFKKLSAQVARLGLEFGGVTAP*TRFQRV
Trigger: CACCCTCTGGAAGCGGGTCCAAGGTGCTGTCACCCC...ACCGAATTCAAGACCAAGGCGTGCTACCTGAGCTGACAGCTTTTTGAAAGCCGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp TTTATGCGTGAGAAAACCAAGGCCCTGATGGTGTCCCTGGTCCAAGTCCAGTGCTGCTGCGGCTCTCCATaGAGCTGGGCAAGAAACCTG +
Preference number: 4 (lower is better)
Translates to: FMREKTKALMVSLVQVQCCCGSP*SWARNL
Trigger: CAGGTTTCTTGCCCAGCTCCATGGAGAGCCGCAGCA...GCACTGGACTTGGACCAGGGACACCATCAGGGCCTTGGTTTTCTCACGCATAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp TCGGCTTTCAAAAAGCTGTCAGCTCAGGTAGCACGCCTTGGTCTTGAATTCGGTTGGTGGAGCACTTGCTaGACCCAGGGCCCCTCCAGT +
Preference number: 4 (lower is better)
Translates to: SAFKKLSAQVARLGLEFGWWSTC*TQGPSS
Trigger: ACTGGAGGGGCCCTGGGTCCAGCAAGTGCTCCACCA...ACCGAATTCAAGACCAAGGCGTGCTACCTGAGCTGACAGCTTTTTGAAAGCCGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR CCA 90 bp CACTGGTGGCACCATGACAGTGAGGAGAACGGAGCACAGTTCCTTCCGTGCCTCTGTAGAACTGGCAAATaGGAGAGCCAGGACCCACAT +
Preference number: 4 (lower is better)
Translates to: HWWHHDSEENGAQFLPCLCRTGK*ESQDPH
Trigger: ATGTGGGTCCTGGCTCTCCCATTTGCCAGTTCTACA...GAGGCACGGAAGGAACTGTGCTCCGTTCTCCTCACTGTCATGGTGCCACCAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR CCA 90 bp CAGATCTCGGTGGCAGGTGGCTCTGCACAGTCCAGAGTGATAAAACAATCACAGACCAGGCCCAGGGTGTaGTGCAGGCTGTCTGCTTGT +
Preference number: 4 (lower is better)
Translates to: QISVAGGSAQSRVIKQSQTRPRV*CRLSAC
Trigger: ACAAGCAGACAGCCTGCACCACACCCTGGGCCTGGT...CTGTGATTGTTTTATCACTCTGGACTGTGCAGAGCCACCTGCCACCGAGATCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR TCA 90 bp TCGGCTTTCAAAAAGCTGTCAGCTCAGGTAGCACGCCTTGGTCTTGAATTCGGTAATTGCGGGCTGCTCTaGGCCTCACTTCCTGTGGCC +
Preference number: 4 (lower is better)
Translates to: SAFKKLSAQVARLGLEFGNCGLL*ASLPVA
Trigger: GGCCACAGGAAGTGAGGCTCAGAGCAGCCCGCAATT...ACCGAATTCAAGACCAAGGCGTGCTACCTGAGCTGACAGCTTTTTGAAAGCCGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp ATTGTTTATGCCTGCAGAGGGGAGTGGGTGACTAGAGGGGAGGAGGATGATGGCTGGCTTAGGTCACGGTaGAACTCATCTGGTGAGCTG +
Preference number: 4 (lower is better)
Translates to: IVYACRGEWVTRGEEDDGWLRSR*NSSGEL
Trigger: CAGCTCACCAGATGAGTTTCACCGTGACCTAAGCCA...GCCATCATCCTCCTCCCCTCTAGTCACCCACTCCCCTCTGCAGGCATAAACAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319921.4
CDS-3UTR TCA 90 bp TCAGCAAGCCAGCCCCCGGCCCCCACACCCGTTCATAGGCAGTCGGAATGCAGATTCTCTCTCATAAACTaGAGTAGGGAACTCGTATCT +
Preference number: 4 (lower is better)
Translates to: SASQPPAPTPVHRQSECRFSLIN*SRELVS
Trigger: AGATACGAGTTCCCTACTTCAGTTTATGAGAGAGAA...TCTGCATTCCGACTGCCTATGAACGGGTGTGGGGGCCGGGGGCTGGCTTGCTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp ATCAAGTCCACGCCGCAGACGAGGAGAGAGGAGTCTTCTCTCCAAAGTCATCCAGGGGTTCCTCCTTTGTaGGCCTCCATTCCATGTCTC +
Preference number: 4 (lower is better)
Translates to: IKSTPQTRREESSLQSHPGVPPL*ASIPCL
Trigger: GAGACATGGAATGGAGGCTCACAAAGGAGGAACCCC...TGGATGACTTTGGAGAGAAGACTCCTCTCTCCTCGTCTGCGGCGTGGACTTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp GCACGCCTTGGTCTTGAATTCGGTGCTACGCTGACAGCTCTCCTTCTGAATGCACTGAGACTGGCAGGCTaGGCTCACGGCTTCAATGAT +
Preference number: 4 (lower is better)
Translates to: ARLGLEFGATLTALLLNALRLAG*AHGFND
Trigger: ATCATTGAAGCCGTGAGCTCAGCCTGCCAGTCTCAG...TGCATTCAGAAGGAGAGCTGTCAGCGTAGCACCGAATTCAAGACCAAGGCGTGC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp GGGGTGGGCAGTGCCAGAGGCGAACGGGCACAGGTCATTACTGCGTGTGTGGCTTCTTGGCATCCTCTGTaGCATTTGCTAGTATTTTCT +
Preference number: 4 (lower is better)
Translates to: GVGSARGERAQVITACVASWHPL*HLLVFS
Trigger: AGAAAATACTAGCAAATGTCACAGAGGATGCCAAGA...AGCCACACACGCAGTAATGACCTGTGCCCGTTCGCCTCTGGCACTGCCCACCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp TTTATGCGTGAGAAAACCAAGGCCCTGATGGTGTCCCTGGTCCAAGTCCAGTGCTGGCGATCCACGTCCTaGACAGCATATTCCCAGCAG +
Preference number: 4 (lower is better)
Translates to: FMREKTKALMVSLVQVQCWRSTS*TAYSQQ
Trigger: CTGCTGGGAATATGCTGTTCAGGACGTGGATCGCCA...GCACTGGACTTGGACCAGGGACACCATCAGGGCCTTGGTTTTCTCACGCATAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp GCACCAGTCCATGATCAAGTCCACGCCGCAGACGAGGAGAGAGGAGTCTTCTCTGCTTGTCCACCAGGCTaGACTCTGATAAGAGCATCA +
Preference number: 4 (lower is better)
Translates to: APVHDQVHAADEERGVFSACPPG*TLIRAS
Trigger: TGATGCTCTTATCAGAGTTCAGCCTGGTGGACAAGC...AGAGAAGACTCCTCTCTCCTCGTCTGCGGCGTGGACTTGATCATGGACTGGTGC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp CACGCCGCAGACGAGGAGAGAGGAGTCTTCTCTCCAAAGTCATCCAAAGATAGCCCCCATCACAGACCATaGCGAGCTGGTAGTCTTCTC +
Preference number: 4 (lower is better)
Translates to: HAADEERGVFSPKSSKDSPHHRP*RAGSLL
Trigger: GAGAAGACTACCAGCTCGTCATGGTCTGTGATGGGG...GCTATCTTTGGATGACTTTGGAGAGAAGACTCCTCTCTCCTCGTCTGCGGCGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp ATCAAGTCCACGCCGCAGACGAGGAGAGAGGAGTCTTCTCTCCAAAGTCATCCACGGCTCTCATCCACCTaGGGGTCGATCAGTCGAATT +
Preference number: 4 (lower is better)
Translates to: IKSTPQTRREESSLQSHPRLSST*GSISRI
Trigger: AATTCGACTGATCGACCCTCAGGTGGATGAGAGCCG...TGGATGACTTTGGAGAGAAGACTCCTCTCTCCTCGTCTGCGGCGTGGACTTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp CAGATCTCGGTGGCAGGTGGCTCTGCACAGTCCAGAGTGATAAAACAATCACAGAGCACGGGGACCTTCTaGTACTGCGCATCCAGGAAG +
Preference number: 4 (lower is better)
Translates to: QISVAGGSAQSRVIKQSQSTGTF*YCASRK
Trigger: CTTCCTGGATGCGCAGTATCAGAAGGTCCCCGTGCT...CTGTGATTGTTTTATCACTCTGGACTGTGCAGAGCCACCTGCCACCGAGATCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp ATCAAGTCCACGCCGCAGACGAGGAGAGAGGAGTCTTCTCTCCAAAGTCATCCAAAGAAAACGTATGGGTaGGGCTCCGACTCCCACCTC +
Preference number: 4 (lower is better)
Translates to: IKSTPQTRREESSLQSHPKKTYG*GSDSHL
Trigger: GAGGTGGGAGTCGGAGCCTCACCCATACGTTTTCTT...TGGATGACTTTGGAGAGAAGACTCCTCTCTCCTCGTCTGCGGCGTGGACTTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp GCACCAGTCCATGATCAAGTCCACGCCGCAGACGAGGAGAGAGGAGTCTTCTCTTATCAAAGTCGACATTaGAGGGCACCCTCTGGAGCA +
Preference number: 4 (lower is better)
Translates to: APVHDQVHAADEERGVFSYQSRH*RAPSGA
Trigger: TGCTCCAGAGGGTGCCCTTCAATGTCGACTTTGATA...AGAGAAGACTCCTCTCTCCTCGTCTGCGGCGTGGACTTGATCATGGACTGGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp GCACCAGTCCATGATCAAGTCCACGCCGCAGACGAGGAGAGAGGAGTCTTCTCTGTCTCTGTCGATGAATaGTATCATGCTCGCCAGCAG +
Preference number: 4 (lower is better)
Translates to: APVHDQVHAADEERGVFSVSVDE*YHARQQ
Trigger: CTGCTGGCGAGCATGATATCATTCATCGACAGAGAC...AGAGAAGACTCCTCTCTCCTCGTCTGCGGCGTGGACTTGATCATGGACTGGTGC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp CACGCCGCAGACGAGGAGAGAGGAGTCTTCTCTCCAAAGTCATCCAAAGATAGCGAATCCCAAACCTGCTaGGGGTCTTGCTGGCTGTCT +
Preference number: 4 (lower is better)
Translates to: HAADEERGVFSPKSSKDSESQTC*GSCWLS
Trigger: AGACAGCCAGCAAGACCCTCAGCAGGTTTGGGATTC...GCTATCTTTGGATGACTTTGGAGAGAAGACTCCTCTCTCCTCGTCTGCGGCGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp ACCACAGAAAGGACTAGATATTCATACATGCGAGAGCACACTGAGACTGCATGTACGGGAACTGCAGGGTaGGGTGAGGCTGGCGCAGGG +
Preference number: 4 (lower is better)
Translates to: TTERTRYSYMREHTETACTGTAG*GEAGAG
Trigger: CCCTGCGCCAGCCTCACCTCACCCTGCAGTTCCCGT...ACATGCAGTCTCAGTGTGCTCTCGCATGTATGAATATCTAGTCCTTTCTGTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR TCA 90 bp TGTCAACCCAGCTCAACTGTCATAGCTGTCCTGTTCCAGCCACTGGTTCACGCAGAGGCTGTGGGCACGTaGCTTCCAATACAGTGTCAC +
Preference number: 4 (lower is better)
Translates to: CQPSSTVIAVLFQPLVHAEAVGT*LPIQCH
Trigger: GTGACACTGTATTGGAAGTCACGTGCCCACAGCCTC...TGCGTGAACCAGTGGCTGGAACAGGACAGCTATGACAGTTGAGCTGGGTTGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573038.1
CDS-3UTR GCA 90 bp CACGCCGCAGACGAGGAGAGAGGAGTCTTCTCTCCAAAGTCATCCAAAGATAGCTCCTCCTTCAGCTCCTaGCCACACTCCATTTCACCC +
Preference number: 4 (lower is better)
Translates to: HAADEERGVFSPKSSKDSSSFSS*PHSISP
Trigger: GGGTGAAATGGAGTGTGGGCAGGAGCTGAAGGAGGA...GCTATCTTTGGATGACTTTGGAGAGAAGACTCCTCTCTCCTCGTCTGCGGCGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp GCCAGCTCTGAGGTATCAAAGGAGCTCCGAGTGCAAGTTGAAGACTTCAGCAAGTCCTCGGGGTTTTCTTaGCAACTGTCTGAGCCCGGG +
Preference number: 4 (lower is better)
Translates to: ASSEVSKELRVQVEDFSKSSGFS*QLSEPG
Trigger: CCCGGGCTCAGACAGTTGGCAAGAAAACCCCGAGGA...CTTGCTGAAGTCTTCAACTTGCACTCGGAGCTCCTTTGATACCTCAGAGCTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp CAGATCTCGGTGGCAGGTGGCTCTGCACAGTCCAGAGTGATAAAACAATCACAGCCTGGAATTGCGGGCTaGTCTGAGCCTCACTTCCTG +
Preference number: 4 (lower is better)
Translates to: QISVAGGSAQSRVIKQSQPGIAG*SEPHFL
Trigger: CAGGAAGTGAGGCTCAGAGCAGCCCGCAATTCCAGG...CTGTGATTGTTTTATCACTCTGGACTGTGCAGAGCCACCTGCCACCGAGATCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp TTTATGCGTGAGAAAACCAAGGCCCTGATGGTGTCCCTGGTCCAAGTCCAGTGCATGGTGTCCCAGGTCTaGAGGATGCTGAAGGTGCTG +
Preference number: 4 (lower is better)
Translates to: FMREKTKALMVSLVQVQCMVSQV*RMLKVL
Trigger: CAGCACCTTCAGCATCCTGCAGACCTGGGACACCAT...GCACTGGACTTGGACCAGGGACACCATCAGGGCCTTGGTTTTCTCACGCATAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp GGAGAACGGAGCACAGTTCCTTCCGTGCCTCCTGCCGGCGCTGCTCAAGGTGTGTCTATGCTCAGCAAATaGTGCTTCTCTCTCATAAAC +
Preference number: 4 (lower is better)
Translates to: GERSTVPSVPPAGAAQGVSMLSK*CFSLIN
Trigger: GTTTATGAGAGAGAAGCAGCATTTGCTGAGCATAGA...CACACCTTGAGCAGCGCCGGCAGGAGGCACGGAAGGAACTGTGCTCCGTTCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp AGCTCCGAGTGCAAGTTGAAGACTTCAGCAAGCCAGCCCCCGGCCCCCACACCCTCTATGCTCAGCAAATaGTGCTTCTCTCTCATAAAC +
Preference number: 4 (lower is better)
Translates to: SSECKLKTSASQPPAPTPSMLSK*CFSLIN
Trigger: GTTTATGAGAGAGAAGCAGCATTTGCTGAGCATAGA...GGGTGTGGGGGCCGGGGGCTGGCTTGCTGAAGTCTTCAACTTGCACTCGGAGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp ACAGTGATGACAGGGCCATCTGAGGAACGGCCTGCAAGCCCGTGTGACTTGTGCAGAGAGGCTCGTCTATaGTCAGCAAATGCTGCTTCT +
Preference number: 4 (lower is better)
Translates to: TVMTGPSEERPASPCDLCREARL*SANAAS
Trigger: AGAAGCAGCATTTGCTGAGCATAGACGAGCCTCTCT...GCACAAGTCACACGGGCTTGCAGGCCGTTCCTCAGATGGCCCTGTCATCACTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319921.4
CDS-3UTR GCA 90 bp TCAAGTCCACGCCGCAGACGAGGAGAGAGGAGTCTTCTCTCCAAAGTCATCCAAGACTCCTTCCAGCCATaGTCCGCGGGGAATTGGATT +
Preference number: 4 (lower is better)
Translates to: SSPRRRRGERSLLSKVIQDSFQP*SAGNWI
Trigger: AATCCAATTCCCCGCGGAGCATGGCTGGAAGGAGTC...TTGGATGACTTTGGAGAGAAGACTCCTCTCTCCTCGTCTGCGGCGTGGACTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp GTCTCAAAGGAAGTAATGGGCATAAATCAAAAGGCGCTGCTGATGGACTTGGCAGGCTTGGAGAGGCCCTaGACGAACTCCATCCCCCGC +
Preference number: 4 (lower is better)
Translates to: VSKEVMGINQKALLMDLAGLERP*TNSIPR
Trigger: GCGGGGGATGGAGTTCGTGCAGGGCCTCTCCAAGCC...TGCCAAGTCCATCAGCAGCGCCTTTTGATTTATGCCCATTACTTCCTTTGAGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000573038.1
CDS-3UTR GCA 90 bp ATCAAGTCCACGCCGCAGACGAGGAGAGAGGAGTCTTCTCTCCAAAGTCATCCAGTTGGAAGAAAAGCATaGGCCATGGTGGCTGGGGAG +
Preference number: 4 (lower is better)
Translates to: IKSTPQTRREESSLQSHPVGRKA*AMVAGE
Trigger: CTCCCCAGCCACCATGGCGCATGCTTTTCTTCCAAC...TGGATGACTTTGGAGAGAAGACTCCTCTCTCCTCGTCTGCGGCGTGGACTTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp ACCACAGAAAGGACTAGATATTCATACATGCGAGAGCACACTGAGACTGCATGTCTCTCCGCTGCGGGTTaGCCAGCACGTGGCCGGTCT +
Preference number: 4 (lower is better)
Translates to: TTERTRYSYMREHTETACLSAAG*PARGRS
Trigger: AGACCGGCCACGTGCTGGGCAACCCGCAGCGGAGAG...ACATGCAGTCTCAGTGTGCTCTCGCATGTATGAATATCTAGTCCTTTCTGTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp AGAGGTGTAAGCGTTTCAGTCCCAGATCGGCTACAGGGAGTGGCGCTCAGCTCCTTCAGGATGTGCTGCTaGAGAAAGCCTTTTGGATCC +
Preference number: 4 (lower is better)
Translates to: RGVSVSVPDRLQGVALSSFRMCC*RKPFGS
Trigger: GGATCCAAAAGGCTTTCTGCAGCAGCACATCCTGAA...GGAGCTGAGCGCCACTCCCTGTAGCCGATCTGGGACTGAAACGCTTACACCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR GCA 90 bp GGAATGCAGATCTCGGTGGCAGGTGGCTCTGCACAGTCCAGAGTGATAAAACAACTAGAGAGCTGGTGCTaGTCTTGGAGAAGCCTGCGC +
Preference number: 4 (lower is better)
Translates to: GMQISVAGGSAQSRVIKQLESWC*SWRSLR
Trigger: GCGCAGGCTTCTCCAAGAGCAGCACCAGCTCTCTAG...TTGTTTTATCACTCTGGACTGTGCAGAGCCACCTGCCACCGAGATCTGCATTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp TTTATGCGTGAGAAAACCAAGGCCCTGATGGTGTCCCTGGTCCAAGTCCAGTGCCATAGGCAGTCGGAATaGAGATCTCGGTGGCAGGTG +
Preference number: 4 (lower is better)
Translates to: FMREKTKALMVSLVQVQCHRQSE*RSRWQV
Trigger: CACCTGCCACCGAGATCTGCATTCCGACTGCCTATG...GCACTGGACTTGGACCAGGGACACCATCAGGGCCTTGGTTTTCTCACGCATAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp GCCAGCTCTGAGGTATCAAAGGAGCTCCGAGTGCAAGTTGAAGACTTCAGCAAGAGCGGGGCTGCATCCTaGTTCCTTCTCTTGCTGGGT +
Preference number: 4 (lower is better)
Translates to: ASSEVSKELRVQVEDFSKSGAAS*FLLLLG
Trigger: ACCCAGCAAGAGAAGGAAGCAGGATGCAGCCCCGCT...CTTGCTGAAGTCTTCAACTTGCACTCGGAGCTCCTTTGATACCTCAGAGCTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508628.6
CDS-3UTR GCA 90 bp TCGGCTTTCAAAAAGCTGTCAGCTCAGGTAGCACGCCTTGGTCTTGAATTCGGTAGGAAGTGCTCCATCTaGCTGCAGAGGGCTGCCAGC +
Preference number: 4 (lower is better)
Translates to: SAFKKLSAQVARLGLEFGRKCSI*LQRAAS
Trigger: GCTGGCAGCCCTCTGCAGGCAGATGGAGCACTTCCT...ACCGAATTCAAGACCAAGGCGTGCTACCTGAGCTGACAGCTTTTTGAAAGCCGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp AGAAACAGCTCGGCTTTCAAAAAGCTGTCAGCTCAGGTAGCACGCCTTGGTCTTAGACCCACCCATCCCTaGCAGGTGAGCCAGACAGTG +
Preference number: 4 (lower is better)
Translates to: RNSSAFKKLSAQVARLGLRPTHP*QVSQTV
Trigger: CACTGTCTGGCTCACCTGGCAGGGATGGGTGGGTCT...AAGACCAAGGCGTGCTACCTGAGCTGACAGCTTTTTGAAAGCCGAGCTGTTTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp TCGGCTTTCAAAAAGCTGTCAGCTCAGGTAGCACGCCTTGGTCTTGAATTCGGTGCGGCGCAGCAACAGTaGCACCTCCTCAAAGGTGGT +
Preference number: 4 (lower is better)
Translates to: SAFKKLSAQVARLGLEFGAAQQQ*HLLKGG
Trigger: ACCACCTTTGAGGAGGTGGCACTGTTGCTGCGCCGC...ACCGAATTCAAGACCAAGGCGTGCTACCTGAGCTGACAGCTTTTTGAAAGCCGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp CACGCCGCAGACGAGGAGAGAGGAGTCTTCTCTCCAAAGTCATCCAAAGATAGCAGACTTTCCAACACCTaGTCGCTCCGAGGCCACGAT +
Preference number: 4 (lower is better)
Translates to: HAADEERGVFSPKSSKDSRLSNT*SLRGHD
Trigger: ATCGTGGCCTCGGAGCGAGCAGGTGTTGGAAAGTCT...GCTATCTTTGGATGACTTTGGAGAGAAGACTCCTCTCTCCTCGTCTGCGGCGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp GCCAGCTCTGAGGTATCAAAGGAGCTCCGAGTGCAAGTTGAAGACTTCAGCAAGACCACAGAGACGTACTaGTGCAGGTCCTTCCCCTGC +
Preference number: 4 (lower is better)
Translates to: ASSEVSKELRVQVEDFSKTTETY*CRSFPC
Trigger: GCAGGGGAAGGACCTGCAGCAGTACGTCTCTGTGGT...CTTGCTGAAGTCTTCAACTTGCACTCGGAGCTCCTTTGATACCTCAGAGCTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp GCACGCCTTGGTCTTGAATTCGGTGCTACGCTGACAGCTCTCCTTCTGAATGCACGGGATCGTCTTCAATaGATCCGTCTTCCAGCAGCG +
Preference number: 4 (lower is better)
Translates to: ARLGLEFGATLTALLLNARDRLQ*IRLPAA
Trigger: CGCTGCTGGAAGACGGATGCATTGAAGACGATCCCG...TGCATTCAGAAGGAGAGCTGTCAGCGTAGCACCGAATTCAAGACCAAGGCGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp TTCCAAAGACCAGTCTTACCAAGTTTCAGATGTCTGGACTCCAAGTGGCAGTTCGTGGCGCTCCAGGTCTaGCGTGTGCAGGTGTGCCTG +
Preference number: 4 (lower is better)
Translates to: FQRPVLPSFRCLDSKWQFVALQV*RVQVCL
Trigger: CAGGCACACCTGCACACGGCAGACCTGGAGCGCCAC...GAACTGCCACTTGGAGTCCAGACATCTGAAACTTGGTAAGACTGGTCTTTGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR GCA 90 bp TTTATGCGTGAGAAAACCAAGGCCCTGATGGTGTCCCTGGTCCAAGTCCAGTGCTCGGTGTCAAACTGCTaGAGCCACAGGAGTGTGGGT +
Preference number: 4 (lower is better)
Translates to: FMREKTKALMVSLVQVQCSVSNC*SHRSVG
Trigger: ACCCACACTCCTGTGGCTGCAGCAGTTTGACACCGA...GCACTGGACTTGGACCAGGGACACCATCAGGGCCTTGGTTTTCTCACGCATAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp GCCAGCTCTGAGGTATCAAAGGAGCTCCGAGTGCAAGTTGAAGACTTCAGCAAGTCGATGTGGACAGACTaGCACAGCCCTCCGTGGAAG +
Preference number: 4 (lower is better)
Translates to: ASSEVSKELRVQVEDFSKSMWTD*HSPPWK
Trigger: CTTCCACGGAGGGCTGTGGCAGTCTGTCCACATCGA...CTTGCTGAAGTCTTCAACTTGCACTCGGAGCTCCTTTGATACCTCAGAGCTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp TCGGCTTTCAAAAAGCTGTCAGCTCAGGTAGCACGCCTTGGTCTTGAATTCGGTATGCCCACGGCGCTCTaGACACAGCTTCTCAGCAGC +
Preference number: 4 (lower is better)
Translates to: SAFKKLSAQVARLGLEFGMPTAL*TQLLSS
Trigger: GCTGCTGAGAAGCTGTGTGCAGAGCGCCGTGGGCAT...ACCGAATTCAAGACCAAGGCGTGCTACCTGAGCTGACAGCTTTTTGAAAGCCGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp TTTATGCGTGAGAAAACCAAGGCCCTGATGGTGTCCCTGGTCCAAGTCCAGTGCGGCCATTGCGGCAAATaGGTCCAGGGTCATCTCACA +
Preference number: 4 (lower is better)
Translates to: FMREKTKALMVSLVQVQCGHCGK*VQGHLT
Trigger: TGTGAGATGACCCTGGACGCATTTGCCGCAATGGCC...GCACTGGACTTGGACCAGGGACACCATCAGGGCCTTGGTTTTCTCACGCATAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp TCAGCTCCACTGTGGAGTCGCCAGGATGCTGTCATTTTGTCCAGAGGAAAAGTCCCGCTGCCTTGCATGTaGTCATCGGAGCAGATGAGC +
Preference number: 4 (lower is better)
Translates to: SAPLWSRQDAVILSRGKVPLPCM*SSEQMS
Trigger: GCTCATCTGCTCCGATGAGCACATGCAAGGCAGCGG...GACTTTTCCTCTGGACAAAATGACAGCATCCTGGCGACTCCACAGTGGAGCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR GCA 90 bp AGAAACAGCTCGGCTTTCAAAAAGCTGTCAGCTCAGGTAGCACGCCTTGGTCTTAGGCTCCCGCTGCCTTaGATGTGCTCATCGGAGCAG +
Preference number: 4 (lower is better)
Translates to: RNSSAFKKLSAQVARLGLRLPLP*MCSSEQ
Trigger: CTGCTCCGATGAGCACATGCAAGGCAGCGGGAGCCT...AAGACCAAGGCGTGCTACCTGAGCTGACAGCTTTTTGAAAGCCGAGCTGTTTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp ATCAAGTCCACGCCGCAGACGAGGAGAGAGGAGTCTTCTCTCCAAAGTCATCCAGCCTCAAAAGGCCCGTaGGTCTTCACGTCAGAGTTC +
Preference number: 4 (lower is better)
Translates to: IKSTPQTRREESSLQSHPASKGP*VFTSEF
Trigger: GAACTCTGACGTGAAGACGCACGGGCCTTTTGAGGC...TGGATGACTTTGGAGAGAAGACTCCTCTCTCCTCGTCTGCGGCGTGGACTTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp TCAAGTCCACGCCGCAGACGAGGAGAGAGGAGTCTTCTCTCCAAAGTCATCCAAGCCTCAAAAGGCCCGTaGGTCTTCACGTCAGAGTTC +
Preference number: 4 (lower is better)
Translates to: SSPRRRRGERSLLSKVIQASKGP*VFTSEF
Trigger: GAACTCTGACGTGAAGACGCACGGGCCTTTTGAGGC...TTGGATGACTTTGGAGAGAAGACTCCTCTCTCCTCGTCTGCGGCGTGGACTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp TCGGCTTTCAAAAAGCTGTCAGCTCAGGTAGCACGCCTTGGTCTTGAATTCGGTCGGTGCAGGCCAGCATaGCTCCTCTTCTTGCTGTGG +
Preference number: 4 (lower is better)
Translates to: SAFKKLSAQVARLGLEFGRCRPA*LLFLLW
Trigger: CCACAGCAAGAAGAGGAGGCATGCTGGCCTGCACCG...ACCGAATTCAAGACCAAGGCGTGCTACCTGAGCTGACAGCTTTTTGAAAGCCGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR GCA 90 bp TTTCAGGCAGGGCATGGGGGACTCCTTCTGAGGCAGAGGTGTAAGCGTTTCAGTGCAATCATAGCTCACTaGAGCCTCAAACTCCCAGGC +
Preference number: 4 (lower is better)
Translates to: FQAGHGGLLLRQRCKRFSAIIAH*SLKLPG
Trigger: GCCTGGGAGTTTGAGGCTGCAGTGAGCTATGATTGC...ACTGAAACGCTTACACCTCTGCCTCAGAAGGAGTCCCCCATGCCCTGCCTGAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR GCA 90 bp CAGATCTCGGTGGCAGGTGGCTCTGCACAGTCCAGAGTGATAAAACAATCACAGTTCCACTGGGGCAATTaGCTGCCTGAGAGCGCTCTC +
Preference number: 4 (lower is better)
Translates to: QISVAGGSAQSRVIKQSQFHWGN*LPESAL
Trigger: GAGAGCGCTCTCAGGCAGGCAATTGCCCCAGTGGAA...CTGTGATTGTTTTATCACTCTGGACTGTGCAGAGCCACCTGCCACCGAGATCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR CCA 90 bp CTGGACTTCCCCTGTGGCCGCAAGGCTGTGCTTGTACAGGGGTTAAGTGTCCAAAAGAGCAGGAGTCGCTaGCAGCCTGCTATATACTAC +
Preference number: 4 (lower is better)
Translates to: LDFPCGRKAVLVQGLSVQKSRSR*QPAIYY
Trigger: GTAGTATATAGCAGGCTGCCAGCGACTCCTGCTCTT...TTGGACACTTAACCCCTGTACAAGCACAGCCTTGCGGCCACAGGGGAAGTCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000319921.4
CDS-3UTR CCA 90 bp AGGACTAGATATTCATACATGCGAGAGCACACTGAGACTGCATGTTTATTTGGCCCTCCAGTGGCGTGGTaGCTGTGCCTGGGGGCTGGC +
Preference number: 4 (lower is better)
Translates to: RTRYSYMREHTETACLFGPPVAW*LCLGAG
Trigger: GCCAGCCCCCAGGCACAGCCACCACGCCACTGGAGG...GCCAAATAAACATGCAGTCTCAGTGTGCTCTCGCATGTATGAATATCTAGTCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp AGAAACAGCTCGGCTTTCAAAAAGCTGTCAGCTCAGGTAGCACGCCTTGGTCTTTCCTCCCCTTCCGTGTaGTCCTGGAATTGCGGGCTG +
Preference number: 4 (lower is better)
Translates to: RNSSAFKKLSAQVARLGLSSPSV*SWNCGL
Trigger: CAGCCCGCAATTCCAGGACCACACGGAAGGGGAGGA...AAGACCAAGGCGTGCTACCTGAGCTGACAGCTTTTTGAAAGCCGAGCTGTTTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp CTGGACTTCCCCTGTGGCCGCAAGGCTGTGCTTGTACAGGGGTTAAGTGTCCAACATGACCCAAGTCTCTaGTGTAGTGCAGCTCACAGA +
Preference number: 4 (lower is better)
Translates to: LDFPCGRKAVLVQGLSVQHDPSL*CSAAHR
Trigger: TCTGTGAGCTGCACTACACCAGAGACTTGGGTCATG...TTGGACACTTAACCCCTGTACAAGCACAGCCTTGCGGCCACAGGGGAAGTCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319921.4
CDS-3UTR CCA 90 bp TCAGCAAGCCAGCCCCCGGCCCCCACACCCGTTCATAGGCAGTCGGAATGCAGATATCTAGGTGCTTCTTaGAAATGCAGACAATGCCTT +
Preference number: 4 (lower is better)
Translates to: SASQPPAPTPVHRQSECRYLGAS*KCRQCL
Trigger: AAGGCATTGTCTGCATTTCCAAGAAGCACCTAGATA...TCTGCATTCCGACTGCCTATGAACGGGTGTGGGGGCCGGGGGCTGGCTTGCTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp CACTGGTGGCACCATGACAGTGAGGAGAACGGAGCACAGTTCCTTCCGTGCCTCCAGTTTACTCCTCACTaGGCAGTCCACAGGCAAAAA +
Preference number: 4 (lower is better)
Translates to: HWWHHDSEENGAQFLPCLQFTPH*AVHRQK
Trigger: TTTTTGCCTGTGGACTGCCCAGTGAGGAGTAAACTG...GAGGCACGGAAGGAACTGTGCTCCGTTCTCCTCACTGTCATGGTGCCACCAGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp ACAGTGATGACAGGGCCATCTGAGGAACGGCCTGCAAGCCCGTGTGACTTGTGCTGTCCTCTAAGCCTTTaGTGTCCCAGCAACTATTGC +
Preference number: 4 (lower is better)
Translates to: TVMTGPSEERPASPCDLCCPLSL*CPSNYC
Trigger: GCAATAGTTGCTGGGACACCAAAGGCTTAGAGGACA...GCACAAGTCACACGGGCTTGCAGGCCGTTCCTCAGATGGCCCTGTCATCACTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319921.4
CDS-3UTR CCA 90 bp CTGGACTTCCCCTGTGGCCGCAAGGCTGTGCTTGTACAGGGGTTAAGTGTCCAATTCATAGCCCTTAGCTaGGTCATGGCAGAACACAGC +
Preference number: 4 (lower is better)
Translates to: LDFPCGRKAVLVQGLSVQFIALS*VMAEHS
Trigger: GCTGTGTTCTGCCATGACCCAGCTAAGGGCTATGAA...TTGGACACTTAACCCCTGTACAAGCACAGCCTTGCGGCCACAGGGGAAGTCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319921.4
CDS-3UTR CCA 90 bp CTGGACTTCCCCTGTGGCCGCAAGGCTGTGCTTGTACAGGGGTTAAGTGTCCAAGGCCGTGATTCCATATaGAACACATGCAGGATGGTG +
Preference number: 4 (lower is better)
Translates to: LDFPCGRKAVLVQGLSVQGRDSI*NTCRMV
Trigger: CACCATCCTGCATGTGTTCCATATGGAATCACGGCC...TTGGACACTTAACCCCTGTACAAGCACAGCCTTGCGGCCACAGGGGAAGTCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319921.4
CDS-3UTR CCA 90 bp TGCACTTTCCTGGCGCTTGTTTTTCCAGCTGGAAACGGGATTCGTAATGGTAATTTGGGAAACACCCACTaGTGCGGGCGGCCGGGCTTG +
Preference number: 4 (lower is better)
Translates to: CTFLALVFPAGNGIRNGNLGNTH*CGRPGL
Trigger: CAAGCCCGGCCGCCCGCACCAGTGGGTGTTTCCCAA...ATTACCATTACGAATCCCGTTTCCAGCTGGAAAAACAAGCGCCAGGAAAGTGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR CCA 90 bp TGCACTTTCCTGGCGCTTGTTTTTCCAGCTGGAAACGGGATTCGTAATGGTAATCCTATCCATCTGGCCTaGGTGGTCCTGCCGCAGCCC +
Preference number: 4 (lower is better)
Translates to: CTFLALVFPAGNGIRNGNPIHLA*VVLPQP
Trigger: GGGCTGCGGCAGGACCACCCAGGCCAGATGGATAGG...ATTACCATTACGAATCCCGTTTCCAGCTGGAAAAACAAGCGCCAGGAAAGTGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR CCA 90 bp TCAAGTCCACGCCGCAGACGAGGAGAGAGGAGTCTTCTCTCCAAAGTCATCCAATGTGTCCCAGCATCTTaGCCAACTGCTCCAGGTCCT +
Preference number: 4 (lower is better)
Translates to: SSPRRRRGERSLLSKVIQCVPAS*PTAPGP
Trigger: AGGACCTGGAGCAGTTGGCCAAGATGCTGGGACACA...TTGGATGACTTTGGAGAGAAGACTCCTCTCTCCTCGTCTGCGGCGTGGACTTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp TTTCAGGCAGGGCATGGGGGACTCCTTCTGAGGCAGAGGTGTAAGCGTTTCAGTCTTCTGCTAGAGAGCTaGTGCTGCTCTTGGAGAAGC +
Preference number: 4 (lower is better)
Translates to: FQAGHGGLLLRQRCKRFSLLLES*CCSWRS
Trigger: GCTTCTCCAAGAGCAGCACCAGCTCTCTAGCAGAAG...ACTGAAACGCTTACACCTCTGCCTCAGAAGGAGTCCCCCATGCCCTGCCTGAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR CCA 90 bp AGAGGTGTAAGCGTTTCAGTCCCAGATCGGCTACAGGGAGTGGCGCTCAGCTCCTCATTACTGCGTGTGTaGCTGAGCTACAAGTCTCCT +
Preference number: 4 (lower is better)
Translates to: RGVSVSVPDRLQGVALSSSLLRV*LSYKSP
Trigger: AGGAGACTTGTAGCTCAGCCACACACGCAGTAATGA...GGAGCTGAGCGCCACTCCCTGTAGCCGATCTGGGACTGAAACGCTTACACCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR CCA 90 bp GGAATGCAGATCTCGGTGGCAGGTGGCTCTGCACAGTCCAGAGTGATAAAACAAGATCTCGGTGGCAGGTaGCTCTGCACAGTCCAGAGT +
Preference number: 4 (lower is better)
Translates to: GMQISVAGGSAQSRVIKQDLGGR*LCTVQS
Trigger: ACTCTGGACTGTGCAGAGCCACCTGCCACCGAGATC...TTGTTTTATCACTCTGGACTGTGCAGAGCCACCTGCCACCGAGATCTGCATTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp AGAGGTGTAAGCGTTTCAGTCCCAGATCGGCTACAGGGAGTGGCGCTCAGCTCCAGTCACACAGTTTCCTaGGCAGGTACTGGTCCTTAT +
Preference number: 4 (lower is better)
Translates to: RGVSVSVPDRLQGVALSSSHTVS*AGTGPY
Trigger: ATAAGGACCAGTACCTGCCCAGGAAACTGTGTGACT...GGAGCTGAGCGCCACTCCCTGTAGCCGATCTGGGACTGAAACGCTTACACCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR CCA 90 bp CACGCCGCAGACGAGGAGAGAGGAGTCTTCTCTCCAAAGTCATCCAAAGATAGCTCTGGGGAAATCTTTTaGCCACCTTTGGGCGCCTGG +
Preference number: 4 (lower is better)
Translates to: HAADEERGVFSPKSSKDSSGEIF*PPLGAW
Trigger: CCAGGCGCCCAAAGGTGGCCAAAAGATTTCCCCAGA...GCTATCTTTGGATGACTTTGGAGAGAAGACTCCTCTCTCCTCGTCTGCGGCGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp CACTGGTGGCACCATGACAGTGAGGAGAACGGAGCACAGTTCCTTCCGTGCCTCCTTTGGTCAGAGGTGTaGAGTGATGGTGTGGCAAAA +
Preference number: 4 (lower is better)
Translates to: HWWHHDSEENGAQFLPCLLWSEV*SDGVAK
Trigger: TTTTGCCACACCATCACTCCACACCTCTGACCAAAG...GAGGCACGGAAGGAACTGTGCTCCGTTCTCCTCACTGTCATGGTGCCACCAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp ATCAAGTCCACGCCGCAGACGAGGAGAGAGGAGTCTTCTCTCCAAAGTCATCCATGCTTCCCCGGGCTTTaGTCAGAGGTGTGGAGTGAT +
Preference number: 4 (lower is better)
Translates to: IKSTPQTRREESSLQSHPCFPGL*SEVWSD
Trigger: ATCACTCCACACCTCTGACCAAAGCCCGGGGAAGCA...TGGATGACTTTGGAGAGAAGACTCCTCTCTCCTCGTCTGCGGCGTGGACTTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp ATCAAGTCCACGCCGCAGACGAGGAGAGAGGAGTCTTCTCTCCAAAGTCATCCAGGTAACACACCCCGATaGCCAGCATCAACGACCAGA +
Preference number: 4 (lower is better)
Translates to: IKSTPQTRREESSLQSHPGNTPR*PASTTR
Trigger: TCTGGTCGTTGATGCTGGCCATCGGGGTGTGTTACC...TGGATGACTTTGGAGAGAAGACTCCTCTCTCCTCGTCTGCGGCGTGGACTTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp AGAAACAGCTCGGCTTTCAAAAAGCTGTCAGCTCAGGTAGCACGCCTTGGTCTTTCTTGGCGAGAGACTTaGAGCTGCCGGGCTTCCCCA +
Preference number: 4 (lower is better)
Translates to: RNSSAFKKLSAQVARLGLSWRET*SCRASP
Trigger: TGGGGAAGCCCGGCAGCTCCAAGTCTCTCGCCAAGA...AAGACCAAGGCGTGCTACCTGAGCTGACAGCTTTTTGAAAGCCGAGCTGTTTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp CACGCCGCAGACGAGGAGAGAGGAGTCTTCTCTCCAAAGTCATCCAAAGATAGCCTTCCTCTGAGCACTTaGCCTCGGGCAAATTGGCCA +
Preference number: 4 (lower is better)
Translates to: HAADEERGVFSPKSSKDSLPLST*PRANWP
Trigger: TGGCCAATTTGCCCGAGGCCAAGTGCTCAGAGGAAG...GCTATCTTTGGATGACTTTGGAGAGAAGACTCCTCTCTCCTCGTCTGCGGCGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp GCACCAGTCCATGATCAAGTCCACGCCGCAGACGAGGAGAGAGGAGTCTTCTCTAGCTGGGTGTACTCTTaGTCCTTGGGGAAACCAGAA +
Preference number: 4 (lower is better)
Translates to: APVHDQVHAADEERGVFSSWVYS*SLGKPE
Trigger: TTCTGGTTTCCCCAAGGACCAAGAGTACACCCAGCT...AGAGAAGACTCCTCTCTCCTCGTCTGCGGCGTGGACTTGATCATGGACTGGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp TCGGCTTTCAAAAAGCTGTCAGCTCAGGTAGCACGCCTTGGTCTTGAATTCGGTAATGTGCCCGCCTCCTaGAGAGCGTCCTGGTTGCAG +
Preference number: 4 (lower is better)
Translates to: SAFKKLSAQVARLGLEFGNVPAS*RASWLQ
Trigger: CTGCAACCAGGACGCTCTCCAGGAGGCGGGCACATT...ACCGAATTCAAGACCAAGGCGTGCTACCTGAGCTGACAGCTTTTTGAAAGCCGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp CACGCCGCAGACGAGGAGAGAGGAGTCTTCTCTCCAAAGTCATCCAAAGATAGCGCACTCCAACGTCAGTaGGCTCCTGGAAGGGTTACT +
Preference number: 4 (lower is better)
Translates to: HAADEERGVFSPKSSKDSALQRQ*APGRVT
Trigger: AGTAACCCTTCCAGGAGCCCACTGACGTTGGAGTGC...GCTATCTTTGGATGACTTTGGAGAGAAGACTCCTCTCTCCTCGTCTGCGGCGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR CCA 90 bp TTCCAAAGACCAGTCTTACCAAGTTTCAGATGTCTGGACTCCAAGTGGCAGTTCGCAGGGGCAGCCTGGTaGAGCACTTGCTGGACCCAG +
Preference number: 4 (lower is better)
Translates to: FQRPVLPSFRCLDSKWQFAGAAW*STCWTQ
Trigger: CTGGGTCCAGCAAGTGCTCCACCAGGCTGCCCCTGC...GAACTGCCACTTGGAGTCCAGACATCTGAAACTTGGTAAGACTGGTCTTTGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR CCA 90 bp AGCTCCGAGTGCAAGTTGAAGACTTCAGCAAGCCAGCCCCCGGCCCCCACACCCTTTTACTTCTCTCTTTaGAGGCAGAAATTGGGCGTA +
Preference number: 4 (lower is better)
Translates to: SSECKLKTSASQPPAPTPFYFSL*RQKLGV
Trigger: TACGCCCAATTTCTGCCTCCAAAGAGAGAAGTAAAA...GGGTGTGGGGGCCGGGGGCTGGCTTGCTGAAGTCTTCAACTTGCACTCGGAGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000582970.5
3UTR CAA 72 bp TCTGAGGAAGTGGCTGTCCTCTGGGTTGAGGTTCTGTaGCGCTTCAGGGCACAGGTAGCAGTGATCATGAAG +
Preference number: 4 (lower is better)
Translates to: SEEVAVLWVEVL*RFRAQVAVIMK
Trigger: CTTCATGATCACTGCTACCTGTGCCCTGAAGCGCAACAGAACCTCAACCCAGAGGACAGCCACTTCCTCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR TCA 90 bp ACAGTGATGACAGGGCCATCTGAGGAACGGCCTGCAAGCCCGTGTGACTTGTGCATTGCTGTCCCATTTTaGCTCCCCAAATTCTTCTCC +
Preference number: 4 (lower is better)
Translates to: TVMTGPSEERPASPCDLCIAVPF*LPKFFS
Trigger: GGAGAAGAATTTGGGGAGTCAAAATGGGACAGCAAT...GCACAAGTCACACGGGCTTGCAGGCCGTTCCTCAGATGGCCCTGTCATCACTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319921.4
CDS-3UTR TCA 90 bp TTTATGCGTGAGAAAACCAAGGCCCTGATGGTGTCCCTGGTCCAAGTCCAGTGCAGAAGCTGTTCAGGTTaGTGGTGTCCCAGGTCTGCA +
Preference number: 4 (lower is better)
Translates to: FMREKTKALMVSLVQVQCRSCSG*WCPRSA
Trigger: TGCAGACCTGGGACACCATCAACCTGAACAGCTTCT...GCACTGGACTTGGACCAGGGACACCATCAGGGCCTTGGTTTTCTCACGCATAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp CAGATCTCGGTGGCAGGTGGCTCTGCACAGTCCAGAGTGATAAAACAATCACAGTCTGAGGTTAGGAGGTaGCACAACCAGTCCAGGCTG +
Preference number: 4 (lower is better)
Translates to: QISVAGGSAQSRVIKQSQSEVRR*HNQSRL
Trigger: CAGCCTGGACTGGTTGTGTCACCTCCTAACCTCAGA...CTGTGATTGTTTTATCACTCTGGACTGTGCAGAGCCACCTGCCACCGAGATCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp GCACGCCTTGGTCTTGAATTCGGTGCTACGCTGACAGCTCTCCTTCTGAATGCATGGCTTAGGTCACGGTaGAACTCATCTGGTGAGCTG +
Preference number: 4 (lower is better)
Translates to: ARLGLEFGATLTALLLNAWLRSR*NSSGEL
Trigger: CAGCTCACCAGATGAGTTTCACCGTGACCTAAGCCA...TGCATTCAGAAGGAGAGCTGTCAGCGTAGCACCGAATTCAAGACCAAGGCGTGC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp GGGCAGCCGTGGCCAGCAGGGAGCTTCCTCATGTGGCATTGCCTGCGAGACTGTAGGCCACATATGATATaGTTCCATTCATATGACAGT +
Preference number: 4 (lower is better)
Translates to: GQPWPAGSFLMWHCLRDCRPHMI*FHSYDS
Trigger: ACTGTCATATGAATGGAATCATATCATATGTGGCCT...ACAGTCTCGCAGGCAATGCCACATGAGGAAGCTCCCTGCTGGCCACGGCTGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319921.4
CDS-3UTR TCA 90 bp GCACGCCTTGGTCTTGAATTCGGTGCTACGCTGACAGCTCTCCTTCTGAATGCATGTCTGCCTTGTCTTTaGCCAGATGAAAGCCGTCCC +
Preference number: 4 (lower is better)
Translates to: ARLGLEFGATLTALLLNACLPCL*PDESRP
Trigger: GGGACGGCTTTCATCTGGTCAAAGACAAGGCAGACA...TGCATTCAGAAGGAGAGCTGTCAGCGTAGCACCGAATTCAAGACCAAGGCGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp GGAATGCAGATCTCGGTGGCAGGTGGCTCTGCACAGTCCAGAGTGATAAAACAAAGCTGTTTTCCACACTaGGACACAGCTGGCGAGCAG +
Preference number: 4 (lower is better)
Translates to: GMQISVAGGSAQSRVIKQSCFPH*DTAGEQ
Trigger: CTGCTCGCCAGCTGTGTCTCAGTGTGGAAAACAGCT...TTGTTTTATCACTCTGGACTGTGCAGAGCCACCTGCCACCGAGATCTGCATTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp CACGCCGCAGACGAGGAGAGAGGAGTCTTCTCTCCAAAGTCATCCAAAGATAGCTACTGCGTGTGTGGCTaGGCTACAAGTCTCCTGGAA +
Preference number: 4 (lower is better)
Translates to: HAADEERGVFSPKSSKDSYCVCG*ATSLLE
Trigger: TTCCAGGAGACTTGTAGCTCAGCCACACACGCAGTA...GCTATCTTTGGATGACTTTGGAGAGAAGACTCCTCTCTCCTCGTCTGCGGCGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp GGAATGCAGATCTCGGTGGCAGGTGGCTCTGCACAGTCCAGAGTGATAAAACAAAGAAAACCAAGGCCCTaGTGGTGTCCCTGGTCCAAG +
Preference number: 4 (lower is better)
Translates to: GMQISVAGGSAQSRVIKQRKPRP*WCPWSK
Trigger: CTTGGACCAGGGACACCATCAGGGCCTTGGTTTTCT...TTGTTTTATCACTCTGGACTGTGCAGAGCCACCTGCCACCGAGATCTGCATTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp GCCAGCTCTGAGGTATCAAAGGAGCTCCGAGTGCAAGTTGAAGACTTCAGCAAGACACCTTCAGCTCATTaGTGCCTCCAAGAGCCTCCC +
Preference number: 4 (lower is better)
Translates to: ASSEVSKELRVQVEDFSKTPSAH*CLQEPP
Trigger: GGGAGGCTCTTGGAGGCATCAATGAGCTGAAGGTGT...CTTGCTGAAGTCTTCAACTTGCACTCGGAGCTCCTTTGATACCTCAGAGCTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp TCGGCTTTCAAAAAGCTGTCAGCTCAGGTAGCACGCCTTGGTCTTGAATTCGGTAGATGCCTCTTTGGTTaGTGGCCGTGGCCAGGGTCA +
Preference number: 4 (lower is better)
Translates to: SAFKKLSAQVARLGLEFGRCLFG*WPWPGS
Trigger: TGACCCTGGCCACGGCCATCAACCAAAGAGGCATCT...ACCGAATTCAAGACCAAGGCGTGCTACCTGAGCTGACAGCTTTTTGAAAGCCGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp GGAATGCAGATCTCGGTGGCAGGTGGCTCTGCACAGTCCAGAGTGATAAAACAATGGCGATCCACGTCCTaGACAGCATATTCCCAGCAG +
Preference number: 4 (lower is better)
Translates to: GMQISVAGGSAQSRVIKQWRSTS*TAYSQQ
Trigger: CTGCTGGGAATATGCTGTTCAGGACGTGGATCGCCA...TTGTTTTATCACTCTGGACTGTGCAGAGCCACCTGCCACCGAGATCTGCATTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp TTTATGCGTGAGAAAACCAAGGCCCTGATGGTGTCCCTGGTCCAAGTCCAGTGCTGGGAGGCCTGCAGGTaGCTTTTGGGAAGATGTCAA +
Preference number: 4 (lower is better)
Translates to: FMREKTKALMVSLVQVQCWEACR*LLGRCQ
Trigger: TTGACATCTTCCCAAAAGTCACCTGCAGGCCTCCCA...GCACTGGACTTGGACCAGGGACACCATCAGGGCCTTGGTTTTCTCACGCATAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp TCAGCAAGCCAGCCCCCGGCCCCCACACCCGTTCATAGGCAGTCGGAATGCAGAGGTCTTGGTTTTGATTaGATCGTCTTAAATACTGGT +
Preference number: 4 (lower is better)
Translates to: SASQPPAPTPVHRQSECRGLGFD*IVLNTG
Trigger: ACCAGTATTTAAGACGATTCAATCAAAACCAAGACC...TCTGCATTCCGACTGCCTATGAACGGGTGTGGGGGCCGGGGGCTGGCTTGCTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp GGAATGCAGATCTCGGTGGCAGGTGGCTCTGCACAGTCCAGAGTGATAAAACAATCACCACGAACTTCTTaGAGCCCCTCAGTGTGTCGC +
Preference number: 4 (lower is better)
Translates to: GMQISVAGGSAQSRVIKQSPRTS*SPSVCR
Trigger: GCGACACACTGAGGGGCTTCAAGAAGTTCGTGGTGA...TTGTTTTATCACTCTGGACTGTGCAGAGCCACCTGCCACCGAGATCTGCATTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp GCCAGCTCTGAGGTATCAAAGGAGCTCCGAGTGCAAGTTGAAGACTTCAGCAAGCATCGACACTGCCGTTaGTGTTGGGCTGCAGATGGA +
Preference number: 4 (lower is better)
Translates to: ASSEVSKELRVQVEDFSKHRHCR*CWAADG
Trigger: TCCATCTGCAGCCCAACATCAACGGCAGTGTCGATG...CTTGCTGAAGTCTTCAACTTGCACTCGGAGCTCCTTTGATACCTCAGAGCTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp ATCAAGTCCACGCCGCAGACGAGGAGAGAGGAGTCTTCTCTCCAAAGTCATCCAGTAGCCCAAACCAGCTaGCTCCAAACGGCAGATCAT +
Preference number: 4 (lower is better)
Translates to: IKSTPQTRREESSLQSHPVAQTS*LQTADH
Trigger: ATGATCTGCCGTTTGGAGTCAGCTGGTTTGGGCTAC...TGGATGACTTTGGAGAGAAGACTCCTCTCTCCTCGTCTGCGGCGTGGACTTGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp GGAATGCAGATCTCGGTGGCAGGTGGCTCTGCACAGTCCAGAGTGATAAAACAACGCAGAGGACTTCTGTaGTCACGCGAGTCCCGTTTT +
Preference number: 4 (lower is better)
Translates to: GMQISVAGGSAQSRVIKQRRGLL*SRESRF
Trigger: AAAACGGGACTCGCGTGATCACAGAAGTCCTCTGCG...TTGTTTTATCACTCTGGACTGTGCAGAGCCACCTGCCACCGAGATCTGCATTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp ATCAAGTCCACGCCGCAGACGAGGAGAGAGGAGTCTTCTCTCCAAAGTCATCCATTCCTCATGAAACCCTaGGAGGCGCAGAGGACTTCT +
Preference number: 4 (lower is better)
Translates to: IKSTPQTRREESSLQSHPFLMKP*EAQRTS
Trigger: AGAAGTCCTCTGCGCCTCTCAGGGTTTCATGAGGAA...TGGATGACTTTGGAGAGAAGACTCCTCTCTCCTCGTCTGCGGCGTGGACTTGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp ATCAAGTCCACGCCGCAGACGAGGAGAGAGGAGTCTTCTCTCCAAAGTCATCCAGGATCTCTCTCGGTGTaGTTTTTGCTGACGCTGGAC +
Preference number: 4 (lower is better)
Translates to: IKSTPQTRREESSLQSHPGSLSV*FLLTLD
Trigger: GTCCAGCGTCAGCAAAAATCACACCGAGAGAGATCC...TGGATGACTTTGGAGAGAAGACTCCTCTCTCCTCGTCTGCGGCGTGGACTTGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp ACTGCGTGTGTGGCTGAGCTACAAGTCTCCTGGAATGTAAACAATGTTGGTTTAGCTGCGGAAGAGATCTaGGTAGGCAGCCGGGCCCTG +
Preference number: 4 (lower is better)
Translates to: TACVAELQVSWNVNNVGLAAEEI*VGSRAL
Trigger: CAGGGCCCGGCTGCCTACTCAGATCTCTTCCGCAGC...TAAACCAACATTGTTTACATTCCAGGAGACTTGTAGCTCAGCCACACACGCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp GCACCAGTCCATGATCAAGTCCACGCCGCAGACGAGGAGAGAGGAGTCTTCTCTAGATCTTCACACGATTaGTGTTTCTGCAGAGCTGGG +
Preference number: 4 (lower is better)
Translates to: APVHDQVHAADEERGVFSRSSHD*CFCRAG
Trigger: CCCAGCTCTGCAGAAACATCAATCGTGTGAAGATCT...AGAGAAGACTCCTCTCTCCTCGTCTGCGGCGTGGACTTGATCATGGACTGGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp TCAGCTCCACTGTGGAGTCGCCAGGATGCTGTCATTTTGTCCAGAGGAAAAGTCTCAGACACCTTCTGGTaGAGTTCCTCCGTCAAGGCC +
Preference number: 4 (lower is better)
Translates to: SAPLWSRQDAVILSRGKVSDTFW*SSSVKA
Trigger: GGCCTTGACGGAGGAACTTCACCAGAAGGTGTCTGA...GACTTTTCCTCTGGACAAAATGACAGCATCCTGGCGACTCCACAGTGGAGCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR TCA 90 bp CACTGGTGGCACCATGACAGTGAGGAGAACGGAGCACAGTTCCTTCCGTGCCTCAGTTTCGGACTTCTTTaGGGAATGAGTACTCGGTGT +
Preference number: 4 (lower is better)
Translates to: HWWHHDSEENGAQFLPCLSFGLL*GMSTRC
Trigger: ACACCGAGTACTCATTCCTCAAAGAAGTCCGAAACT...GAGGCACGGAAGGAACTGTGCTCCGTTCTCCTCACTGTCATGGTGCCACCAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp GGGGAGTCTAAAACCAGCTGTAACCAAGTGTCTGTGTACGGGAACTGGTGTGGGTCACATCAGAAACCATaGGGGTGGATCTCCGGAGGT +
Preference number: 4 (lower is better)
Translates to: GESKTSCNQVSVYGNWCGSHQKP*GWISGG
Trigger: ACCTCCGGAGATCCACCCTCATGGTTTCTGATGTGA...CCCACACCAGTTCCCGTACACAGACACTTGGTTACAGCTGGTTTTAGACTCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR TCA 90 bp CACTGGTGGCACCATGACAGTGAGGAGAACGGAGCACAGTTCCTTCCGTGCCTCTCTTTAAAAAGACACTaGGGCGCATCTTGGATACCC +
Preference number: 4 (lower is better)
Translates to: HWWHHDSEENGAQFLPCLSLKRH*GASWIP
Trigger: GGGTATCCAAGATGCGCCTCAGTGTCTTTTTAAAGA...GAGGCACGGAAGGAACTGTGCTCCGTTCTCCTCACTGTCATGGTGCCACCAGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp AGAAACAGCTCGGCTTTCAAAAAGCTGTCAGCTCAGGTAGCACGCCTTGGTCTTCAGATGGAGCACGGCTaGATCCCAAACCTGCTGAGG +
Preference number: 4 (lower is better)
Translates to: RNSSAFKKLSAQVARLGLQMEHG*IPNLLR
Trigger: CCTCAGCAGGTTTGGGATTCAGCCGTGCTCCATCTG...AAGACCAAGGCGTGCTACCTGAGCTGACAGCTTTTTGAAAGCCGAGCTGTTTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp GGAATGCAGATCTCGGTGGCAGGTGGCTCTGCACAGTCCAGAGTGATAAAACAAATGGGGGACTCCTTCTaGGGCAGAGGTGTAAGCGTT +
Preference number: 4 (lower is better)
Translates to: GMQISVAGGSAQSRVIKQMGDSF*GRGVSV
Trigger: AACGCTTACACCTCTGCCTCAGAAGGAGTCCCCCAT...TTGTTTTATCACTCTGGACTGTGCAGAGCCACCTGCCACCGAGATCTGCATTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR TCA 90 bp CACTGGTGGCACCATGACAGTGAGGAGAACGGAGCACAGTTCCTTCCGTGCCTCGTCTTACTTTGTGCTTaGCCCATGCTTCTTCAAGAC +
Preference number: 4 (lower is better)
Translates to: HWWHHDSEENGAQFLPCLVLLCA*PMLLQD
Trigger: GTCTTGAAGAAGCATGGGTCAAGCACAAAGTAAGAC...GAGGCACGGAAGGAACTGTGCTCCGTTCTCCTCACTGTCATGGTGCCACCAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR GCA 90 bp CAGATCTCGGTGGCAGGTGGCTCTGCACAGTCCAGAGTGATAAAACAATCACAGTCCTCCTTGGAGACATaGTGGCACGAAGGACACTCC +
Preference number: 4 (lower is better)
Translates to: QISVAGGSAQSRVIKQSQSSLET*WHEGHS
Trigger: GGAGTGTCCTTCGTGCCAGCATGTCTCCAAGGAGGA...CTGTGATTGTTTTATCACTCTGGACTGTGCAGAGCCACCTGCCACCGAGATCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp TCGGCTTTCAAAAAGCTGTCAGCTCAGGTAGCACGCCTTGGTCTTGAATTCGGTTCCCGGGCTCAGAGCTaGCTCCTTTTGACTCAGGCA +
Preference number: 4 (lower is better)
Translates to: SAFKKLSAQVARLGLEFGSRAQS*LLLTQA
Trigger: TGCCTGAGTCAAAAGGAGGCAGCTCTGAGCCCGGGA...ACCGAATTCAAGACCAAGGCGTGCTACCTGAGCTGACAGCTTTTTGAAAGCCGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp AGGAGGATGATGGCTAAAGGGGCCGGGTTTCTCTTTGAAGTGATGAAAATGCTCAGCGCAGCGGCAATCTaGTTCCCCTTCACCAGGTCC +
Preference number: 4 (lower is better)
Translates to: RRMMAKGAGFLFEVMKMLSAAAI*FPFTRS
Trigger: GGACCTGGTGAAGGGGAAGCAGATTGCCGCTGCGCT...GAGCATTTTCATCACTTCAAAGAGAAACCCGGCCCCTTTAGCCATCATCCTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000319921.4
CDS-3UTR GCA 90 bp CTGGACTTCCCCTGTGGCCGCAAGGCTGTGCTTGTACAGGGGTTAAGTGTCCAATCTTTCTCCCTGTACTaGAAATCGGTCCACAGCTGT +
Preference number: 4 (lower is better)
Translates to: LDFPCGRKAVLVQGLSVQSFSLY*KSVHSC
Trigger: ACAGCTGTGGACCGATTTGCAGTACAGGGAGAAAGA...TTGGACACTTAACCCCTGTACAAGCACAGCCTTGCGGCCACAGGGGAAGTCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319921.4
CDS-3UTR GCA 90 bp GCACCAGTCCATGATCAAGTCCACGCCGCAGACGAGGAGAGAGGAGTCTTCTCTCTGCAGATGGCTTCATaGAGTTTCAGACACACAGTC +
Preference number: 4 (lower is better)
Translates to: APVHDQVHAADEERGVFSLQMAS*SFRHTV
Trigger: GACTGTGTGTCTGAAACTGCATGAAGCCATCTGCAG...AGAGAAGACTCCTCTCTCCTCGTCTGCGGCGTGGACTTGATCATGGACTGGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp CACTGGTGGCACCATGACAGTGAGGAGAACGGAGCACAGTTCCTTCCGTGCCTCGCTTGCTGGAGAATATaGCTTAAGGAAACGACCTTC +
Preference number: 4 (lower is better)
Translates to: HWWHHDSEENGAQFLPCLACWRI*LKETTF
Trigger: GAAGGTCGTTTCCTTAAGGCATATTCTCCAGCAAGC...GAGGCACGGAAGGAACTGTGCTCCGTTCTCCTCACTGTCATGGTGCCACCAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp GGAATGCAGATCTCGGTGGCAGGTGGCTCTGCACAGTCCAGAGTGATAAAACAACTCCGAGAGGAAATCTaGAGCTCTGTCGAGGCAGAG +
Preference number: 4 (lower is better)
Translates to: GMQISVAGGSAQSRVIKQLREEI*SSVEAE
Trigger: CTCTGCCTCGACAGAGCTGCAGATTTCCTCTCGGAG...TTGTTTTATCACTCTGGACTGTGCAGAGCCACCTGCCACCGAGATCTGCATTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp TTTATGCGTGAGAAAACCAAGGCCCTGATGGTGTCCCTGGTCCAAGTCCAGTGCCGTGGGGTGGAGGCTTaGATTGTGGGATCTGTACAA +
Preference number: 4 (lower is better)
Translates to: FMREKTKALMVSLVQVQCRGVEA*IVGSVQ
Trigger: TTGTACAGATCCCACAATGCAAGCCTCCACCCCACG...GCACTGGACTTGGACCAGGGACACCATCAGGGCCTTGGTTTTCTCACGCATAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp TCAAGTCCACGCCGCAGACGAGGAGAGAGGAGTCTTCTCTCCAAAGTCATCCAAAAGTCCGCAAAGAACTaGCAGAACCAGGCCTGTGAC +
Preference number: 4 (lower is better)
Translates to: SSPRRRRGERSLLSKVIQKSAKN*QNQACD
Trigger: GTCACAGGCCTGGTTCTGGCAGTTCTTTGCGGACTT...TTGGATGACTTTGGAGAGAAGACTCCTCTCTCCTCGTCTGCGGCGTGGACTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp CACGCCGCAGACGAGGAGAGAGGAGTCTTCTCTCCAAAGTCATCCAAAGATAGCCAGTCTGGGTCACTCTaGCCTTCATCAGACACTGGT +
Preference number: 4 (lower is better)
Translates to: HAADEERGVFSPKSSKDSQSGSL*PSSDTG
Trigger: ACCAGTGTCTGATGAAGGGCAGAGTGACCCAGACTG...GCTATCTTTGGATGACTTTGGAGAGAAGACTCCTCTCTCCTCGTCTGCGGCGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp GGAATGCAGATCTCGGTGGCAGGTGGCTCTGCACAGTCCAGAGTGATAAAACAACATAGGCAGTCGGAATaGAGATCTCGGTGGCAGGTG +
Preference number: 4 (lower is better)
Translates to: GMQISVAGGSAQSRVIKQHRQSE*RSRWQV
Trigger: CACCTGCCACCGAGATCTGCATTCCGACTGCCTATG...TTGTTTTATCACTCTGGACTGTGCAGAGCCACCTGCCACCGAGATCTGCATTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp AGAAACAGCTCGGCTTTCAAAAAGCTGTCAGCTCAGGTAGCACGCCTTGGTCTTGCCTGGCTGAGCCTCTaGACACTGCAGAAGACCTCT +
Preference number: 4 (lower is better)
Translates to: RNSSAFKKLSAQVARLGLAWLSL*TLQKTS
Trigger: AGAGGTCTTCTGCAGTGTGCAGAGGCTCAGCCAGGC...AAGACCAAGGCGTGCTACCTGAGCTGACAGCTTTTTGAAAGCCGAGCTGTTTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp GGAATGCAGATCTCGGTGGCAGGTGGCTCTGCACAGTCCAGAGTGATAAAACAACAGCTGTCAAGGAAGTaGTCCATCTGCCTGCAGAGG +
Preference number: 4 (lower is better)
Translates to: GMQISVAGGSAQSRVIKQQLSRK*SICLQR
Trigger: CCTCTGCAGGCAGATGGAGCACTTCCTTGACAGCTG...TTGTTTTATCACTCTGGACTGTGCAGAGCCACCTGCCACCGAGATCTGCATTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp GCACCAGTCCATGATCAAGTCCACGCCGCAGACGAGGAGAGAGGAGTCTTCTCTGTAAACCAGCTGCTCTaGCGTGTAGAAGTTCAGGTA +
Preference number: 4 (lower is better)
Translates to: APVHDQVHAADEERGVFSVNQLL*RVEVQV
Trigger: TACCTGAACTTCTACACGGCAGAGCAGCTGGTTTAC...AGAGAAGACTCCTCTCTCCTCGTCTGCGGCGTGGACTTGATCATGGACTGGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp GCACGCCTTGGTCTTGAATTCGGTGCTACGCTGACAGCTCTCCTTCTGAATGCAAGAAAGGCATTCAGCTaGGCTAAGAGCATCGCGCTG +
Preference number: 4 (lower is better)
Translates to: ARLGLEFGATLTALLLNARKAFS*AKSIAL
Trigger: CAGCGCGATGCTCTTAGCGCAGCTGAATGCCTTTCT...TGCATTCAGAAGGAGAGCTGTCAGCGTAGCACCGAATTCAAGACCAAGGCGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp TCAAGTCCACGCCGCAGACGAGGAGAGAGGAGTCTTCTCTCCAAAGTCATCCAACATCCAGAAGCAGCCTaGTGTCGTCATACGGTTTCG +
Preference number: 4 (lower is better)
Translates to: SSPRRRRGERSLLSKVIQHPEAA*CRHTVS
Trigger: CGAAACCGTATGACGACAGCAGGCTGCTTCTGGATG...TTGGATGACTTTGGAGAGAAGACTCCTCTCTCCTCGTCTGCGGCGTGGACTTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp CACGCCGCAGACGAGGAGAGAGGAGTCTTCTCTCCAAAGTCATCCAAAGATAGCTCGAAGAATGTCTGCTaGAGGATCTGCAGTGCCACG +
Preference number: 4 (lower is better)
Translates to: HAADEERGVFSPKSSKDSSKNVC*RICSAT
Trigger: CGTGGCACTGCAGATCCTGCAGCAGACATTCTTCGA...GCTATCTTTGGATGACTTTGGAGAGAAGACTCCTCTCTCCTCGTCTGCGGCGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp TTTATGCGTGAGAAAACCAAGGCCCTGATGGTGTCCCTGGTCCAAGTCCAGTGCTACTCGGTGTCAAACTaGTGCAGCCACAGGAGTGTG +
Preference number: 4 (lower is better)
Translates to: FMREKTKALMVSLVQVQCYSVSN*CSHRSV
Trigger: CACACTCCTGTGGCTGCAGCAGTTTGACACCGAGTA...GCACTGGACTTGGACCAGGGACACCATCAGGGCCTTGGTTTTCTCACGCATAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp ATCAAGTCCACGCCGCAGACGAGGAGAGAGGAGTCTTCTCTCCAAAGTCATCCATACTCGGTGTCAAACTaGTGCAGCCACAGGAGTGTG +
Preference number: 4 (lower is better)
Translates to: IKSTPQTRREESSLQSHPYSVSN*CSHRSV
Trigger: CACACTCCTGTGGCTGCAGCAGTTTGACACCGAGTA...TGGATGACTTTGGAGAGAAGACTCCTCTCTCCTCGTCTGCGGCGTGGACTTGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp TCGGCTTTCAAAAAGCTGTCAGCTCAGGTAGCACGCCTTGGTCTTGAATTCGGTCCGCTGCCTTGCATGTaGTCATCGGAGCAGATGAGC +
Preference number: 4 (lower is better)
Translates to: SAFKKLSAQVARLGLEFGPLPCM*SSEQMS
Trigger: GCTCATCTGCTCCGATGAGCACATGCAAGGCAGCGG...ACCGAATTCAAGACCAAGGCGTGCTACCTGAGCTGACAGCTTTTTGAAAGCCGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp TTTATGCGTGAGAAAACCAAGGCCCTGATGGTGTCCCTGGTCCAAGTCCAGTGCGTGCTCCACGAAGAGTaGGGTGGAGAAAATCCGACT +
Preference number: 4 (lower is better)
Translates to: FMREKTKALMVSLVQVQCVLHEE*GGENPT
Trigger: AGTCGGATTTTCTCCACCGCACTCTTCGTGGAGCAC...GCACTGGACTTGGACCAGGGACACCATCAGGGCCTTGGTTTTCTCACGCATAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp TTTATGCGTGAGAAAACCAAGGCCCTGATGGTGTCCCTGGTCCAAGTCCAGTGCGTGGAGTCGCCAGGATaGTGTCATTTTGTCCAGAGG +
Preference number: 4 (lower is better)
Translates to: FMREKTKALMVSLVQVQCVESPG*CHFVQR
Trigger: CCTCTGGACAAAATGACAGCATCCTGGCGACTCCAC...GCACTGGACTTGGACCAGGGACACCATCAGGGCCTTGGTTTTCTCACGCATAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR CCA 90 bp CACGCCGCAGACGAGGAGAGAGGAGTCTTCTCTCCAAAGTCATCCAAAGATAGCTCCTTGGAGACATGCTaGCACGAAGGACACTCCATG +
Preference number: 4 (lower is better)
Translates to: HAADEERGVFSPKSSKDSSLETC*HEGHSM
Trigger: CATGGAGTGTCCTTCGTGCCAGCATGTCTCCAAGGA...GCTATCTTTGGATGACTTTGGAGAGAAGACTCCTCTCTCCTCGTCTGCGGCGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp GCCAGCTCTGAGGTATCAAAGGAGCTCCGAGTGCAAGTTGAAGACTTCAGCAAGTGGGGGTTTCCTCCTTaGAGACATGCTGGCACGAAG +
Preference number: 4 (lower is better)
Translates to: ASSEVSKELRVQVEDFSKWGFPP*RHAGTK
Trigger: CTTCGTGCCAGCATGTCTCCAAGGAGGAAACCCCCA...CTTGCTGAAGTCTTCAACTTGCACTCGGAGCTCCTTTGATACCTCAGAGCTGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp TCGGCTTTCAAAAAGCTGTCAGCTCAGGTAGCACGCCTTGGTCTTGAATTCGGTAGCCTCTCTCCGCACTaGCTGCAGAACTTGGGGGTT +
Preference number: 4 (lower is better)
Translates to: SAFKKLSAQVARLGLEFGSLSPH*LQNLGV
Trigger: AACCCCCAAGTTCTGCAGCCAGTGCGGAGAGAGGCT...ACCGAATTCAAGACCAAGGCGTGCTACCTGAGCTGACAGCTTTTTGAAAGCCGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp ACAGTGATGACAGGGCCATCTGAGGAACGGCCTGCAAGCCCGTGTGACTTGTGCTTCTTTTTGCTTTCTTaGACGGTCCAGGAGGCTTTG +
Preference number: 4 (lower is better)
Translates to: TVMTGPSEERPASPCDLCFFLLS*TVQEAL
Trigger: CAAAGCCTCCTGGACCGTCCAAGAAAGCAAAAAGAA...GCACAAGTCACACGGGCTTGCAGGCCGTTCCTCAGATGGCCCTGTCATCACTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000319921.4
CDS-3UTR CCA 90 bp ACTGCGTGTGTGGCTGAGCTACAAGTCTCCTGGAATGTAAACAATGTTGGTTTACTTCACCAGCAGAGGTaGGGGGACCGGTCCCCTCCT +
Preference number: 4 (lower is better)
Translates to: TACVAELQVSWNVNNVGLLHQQR*GDRSPP
Trigger: AGGAGGGGACCGGTCCCCCCACCTCTGCTGGTGAAG...TAAACCAACATTGTTTACATTCCAGGAGACTTGTAGCTCAGCCACACACGCAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp CACGCCGCAGACGAGGAGAGAGGAGTCTTCTCTCCAAAGTCATCCAAAGATAGCTCTCGTCCTTGGTCTTaGTCTCAGCTTCCTGGCAGT +
Preference number: 4 (lower is better)
Translates to: HAADEERGVFSPKSSKDSSRPWS*SQLPGS
Trigger: ACTGCCAGGAAGCTGAGACCAAGACCAAGGACGAGA...GCTATCTTTGGATGACTTTGGAGAGAAGACTCCTCTCTCCTCGTCTGCGGCGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp GCACGCCTTGGTCTTGAATTCGGTGCTACGCTGACAGCTCTCCTTCTGAATGCACAGCCATCTCGTCCTTaGTCTTGGTCTCAGCTTCCT +
Preference number: 4 (lower is better)
Translates to: ARLGLEFGATLTALLLNAQPSRP*SWSQLP
Trigger: AGGAAGCTGAGACCAAGACCAAGGACGAGATGGCTG...TGCATTCAGAAGGAGAGCTGTCAGCGTAGCACCGAATTCAAGACCAAGGCGTGC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp CTGGACTTCCCCTGTGGCCGCAAGGCTGTGCTTGTACAGGGGTTAAGTGTCCAACTTGCCTTCACTTCCTaGACATCTGCTTCCTGGTTT +
Preference number: 4 (lower is better)
Translates to: LDFPCGRKAVLVQGLSVQLAFTS*TSASWF
Trigger: AAACCAGGAAGCAGATGTCCAGGAAGTGAAGGCAAG...TTGGACACTTAACCCCTGTACAAGCACAGCCTTGCGGCCACAGGGGAAGTCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319921.4
CDS-3UTR CCA 90 bp ATTGTTTATGCCTGCAGAGGGGAGTGGGTGACTAGAGGGGAGGAGGATGATGGCAGAGAGATGATGGCGTaGAAGAACACGGTGACTCCT +
Preference number: 4 (lower is better)
Translates to: IVYACRGEWVTRGEEDDGREMMA*KNTVTP
Trigger: AGGAGTCACCGTGTTCTTCCACGCCATCATCTCTCT...GCCATCATCCTCCTCCCCTCTAGTCACCCACTCCCCTCTGCAGGCATAAACAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319921.4
CDS-3UTR CCA 90 bp TTTCAGGCAGGGCATGGGGGACTCCTTCTGAGGCAGAGGTGTAAGCGTTTCAGTAGAGAGATGATGGCGTaGAAGAACACGGTGACTCCT +
Preference number: 4 (lower is better)
Translates to: FQAGHGGLLLRQRCKRFSREMMA*KNTVTP
Trigger: AGGAGTCACCGTGTTCTTCCACGCCATCATCTCTCT...ACTGAAACGCTTACACCTCTGCCTCAGAAGGAGTCCCCCATGCCCTGCCTGAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR CCA 90 bp GGGCAGCCGTGGCCAGCAGGGAGCTTCCTCATGTGGCATTGCCTGCGAGACTGTCCTTGGAAGACTGTTTaGACTGAATTATTTCCAGTT +
Preference number: 4 (lower is better)
Translates to: GQPWPAGSFLMWHCLRDCPWKTV*TELFPV
Trigger: AACTGGAAATAATTCAGTCCAAACAGTCTTCCAAGG...ACAGTCTCGCAGGCAATGCCACATGAGGAAGCTCCCTGCTGGCCACGGCTGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319921.4
CDS-3UTR CCA 90 bp CTGGACTTCCCCTGTGGCCGCAAGGCTGTGCTTGTACAGGGGTTAAGTGTCCAAATTTCTCGAAGGTCTTaGCCACACTGTCCTCTAAGC +
Preference number: 4 (lower is better)
Translates to: LDFPCGRKAVLVQGLSVQISRRS*PHCPLS
Trigger: GCTTAGAGGACAGTGTGGCCAAGACCTTCGAGAAAT...TTGGACACTTAACCCCTGTACAAGCACAGCCTTGCGGCCACAGGGGAAGTCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319921.4
CDS-3UTR CCA 90 bp GATGAGAAAGTTTCAGAACATGTATGTACATGGTTCAGAAACAGCTCGGCTTTCGCGGGCGGCCGGGCTTaGAGAGGCCCTGCACGAACT +
Preference number: 4 (lower is better)
Translates to: DEKVSEHVCTWFRNSSAFAGGRA*RGPART
Trigger: AGTTCGTGCAGGGCCTCTCCAAGCCCGGCCGCCCGC...GAAAGCCGAGCTGTTTCTGAACCATGTACATACATGTTCTGAAACTTTCTCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp GCAAATCTGTCAACCCAGCTCAACTGTCATAGCTGTCCTGTTCCAGCCACTGGTACTCGAGGACAGCTTTaGCCACAGCATCACGGAGAG +
Preference number: 4 (lower is better)
Translates to: ANLSTQLNCHSCPVPATGTRGQL*PQHHGE
Trigger: CTCTCCGTGATGCTGTGGCCAAAGCTGTCCTCGAGT...ACCAGTGGCTGGAACAGGACAGCTATGACAGTTGAGCTGGGTTGACAGATTTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573038.1
CDS-3UTR CCA 90 bp GGAATGCAGATCTCGGTGGCAGGTGGCTCTGCACAGTCCAGAGTGATAAAACAACCCCGCCCTCAACAATaGCACAGAATTGTCCACGAG +
Preference number: 4 (lower is better)
Translates to: GMQISVAGGSAQSRVIKQPRPQQ*HRIVHE
Trigger: CTCGTGGACAATTCTGTGCCATTGTTGAGGGCGGGG...TTGTTTTATCACTCTGGACTGTGCAGAGCCACCTGCCACCGAGATCTGCATTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp CACGCCGCAGACGAGGAGAGAGGAGTCTTCTCTCCAAAGTCATCCAAAGATAGCCGGCTGCAGCATGAATaGCCATTTCTGTCACCGTTC +
Preference number: 4 (lower is better)
Translates to: HAADEERGVFSPKSSKDSRLQHE*PFLSPF
Trigger: GAACGGTGACAGAAATGGCCATTCATGCTGCAGCCG...GCTATCTTTGGATGACTTTGGAGAGAAGACTCCTCTCTCCTCGTCTGCGGCGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp ATCAAGTCCACGCCGCAGACGAGGAGAGAGGAGTCTTCTCTCCAAAGTCATCCAAGCAAGGATGGCCGTTaGGACAAGTGTACCAGTGGA +
Preference number: 4 (lower is better)
Translates to: IKSTPQTRREESSLQSHPSKDGR*DKCTSG
Trigger: TCCACTGGTACACTTGTCCCAACGGCCATCCTTGCT...TGGATGACTTTGGAGAGAAGACTCCTCTCTCCTCGTCTGCGGCGTGGACTTGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp AGAAACAGCTCGGCTTTCAAAAAGCTGTCAGCTCAGGTAGCACGCCTTGGTCTTCCCACGGAGCAAGGATaGCCGTTGGGACAAGTGTAC +
Preference number: 4 (lower is better)
Translates to: RNSSAFKKLSAQVARLGLPTEQG*PLGQVY
Trigger: GTACACTTGTCCCAACGGCCATCCTTGCTCCGTGGG...AAGACCAAGGCGTGCTACCTGAGCTGACAGCTTTTTGAAAGCCGAGCTGTTTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp TCAAGTCCACGCCGCAGACGAGGAGAGAGGAGTCTTCTCTCCAAAGTCATCCAAATGTTTATCAGAGCCTaGGAACTCTGGGACGCTCCC +
Preference number: 4 (lower is better)
Translates to: SSPRRRRGERSLLSKVIQMFIRA*ELWDAP
Trigger: GGGAGCGTCCCAGAGTTCCCAGGCTCTGATAAACAT...TTGGATGACTTTGGAGAGAAGACTCCTCTCTCCTCGTCTGCGGCGTGGACTTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp ACCACAGAAAGGACTAGATATTCATACATGCGAGAGCACACTGAGACTGCATGTCTGCGCAGGACGAGGTaGACCACGCCGATGGTCTCG +
Preference number: 4 (lower is better)
Translates to: TTERTRYSYMREHTETACLRRTR*TTPMVS
Trigger: CGAGACCATCGGCGTGGTCCACCTCGTCCTGCGCAG...ACATGCAGTCTCAGTGTGCTCTCGCATGTATGAATATCTAGTCCTTTCTGTGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp TTTCAGGCAGGGCATGGGGGACTCCTTCTGAGGCAGAGGTGTAAGCGTTTCAGTCCTGGTACTGGCAGTTaGAGAGAATCAGTGGAGTCA +
Preference number: 4 (lower is better)
Translates to: FQAGHGGLLLRQRCKRFSPGTGS*RESVES
Trigger: TGACTCCACTGATTCTCTCCAACTGCCAGTACCAGG...ACTGAAACGCTTACACCTCTGCCTCAGAAGGAGTCCCCCATGCCCTGCCTGAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR CCA 90 bp TCAGCAAGCCAGCCCCCGGCCCCCACACCCGTTCATAGGCAGTCGGAATGCAGATTTCCGAAACATAACTaGTTTTGTATGTGCTCTGAG +
Preference number: 4 (lower is better)
Translates to: SASQPPAPTPVHRQSECRFPKHN*FCMCSE
Trigger: CTCAGAGCACATACAAAACCAGTTATGTTTCGGAAA...TCTGCATTCCGACTGCCTATGAACGGGTGTGGGGGCCGGGGGCTGGCTTGCTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp TCAGCTCCACTGTGGAGTCGCCAGGATGCTGTCATTTTGTCCAGAGGAAAAGTCGAATGCAGATCTCGGTaGCAGGTGGCTCTGCACAGT +
Preference number: 4 (lower is better)
Translates to: SAPLWSRQDAVILSRGKVECRSR*QVALHS
Trigger: ACTGTGCAGAGCCACCTGCCACCGAGATCTGCATTC...GACTTTTCCTCTGGACAAAATGACAGCATCCTGGCGACTCCACAGTGGAGCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR CCA 90 bp TCAAGTCCACGCCGCAGACGAGGAGAGAGGAGTCTTCTCTCCAAAGTCATCCAATCTCTTTGGTCCTGGTaGTCCACGGTGCACATGATC +
Preference number: 4 (lower is better)
Translates to: SSPRRRRGERSLLSKVIQSLWSW*STVHMI
Trigger: GATCATGTGCACCGTGGACCACCAGGACCAAAGAGA...TTGGATGACTTTGGAGAGAAGACTCCTCTCTCCTCGTCTGCGGCGTGGACTTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp TCAAGTCCACGCCGCAGACGAGGAGAGAGGAGTCTTCTCTCCAAAGTCATCCAAAGCTCCTGGTTGATCTaGTCCAGTGTTTCACGGCGA +
Preference number: 4 (lower is better)
Translates to: SSPRRRRGERSLLSKVIQSSWLI*SSVSRR
Trigger: TCGCCGTGAAACACTGGACCAGATCAACCAGGAGCT...TTGGATGACTTTGGAGAGAAGACTCCTCTCTCCTCGTCTGCGGCGTGGACTTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp ATCAAGTCCACGCCGCAGACGAGGAGAGAGGAGTCTTCTCTCCAAAGTCATCCATTCCTGGGCAGGTACTaGTCCTTATCCAGAGCCTTC +
Preference number: 4 (lower is better)
Translates to: IKSTPQTRREESSLQSHPFLGRY*SLSRAF
Trigger: GAAGGCTCTGGATAAGGACCAGTACCTGCCCAGGAA...TGGATGACTTTGGAGAGAAGACTCCTCTCTCCTCGTCTGCGGCGTGGACTTGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp TCAAGTCCACGCCGCAGACGAGGAGAGAGGAGTCTTCTCTCCAAAGTCATCCAAGCCATTCCAAGTTCCTaGCGGAGTCACACAGTTTCC +
Preference number: 4 (lower is better)
Translates to: SSPRRRRGERSLLSKVIQAIPSS*RSHTVS
Trigger: GGAAACTGTGTGACTCCGCCAGGAACTTGGAATGGC...TTGGATGACTTTGGAGAGAAGACTCCTCTCTCCTCGTCTGCGGCGTGGACTTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp GGAATGCAGATCTCGGTGGCAGGTGGCTCTGCACAGTCCAGAGTGATAAAACAATCTGGGGAAATCTTTTaGCCACCTTTGGGCGCCTGG +
Preference number: 4 (lower is better)
Translates to: GMQISVAGGSAQSRVIKQSGEIF*PPLGAW
Trigger: CCAGGCGCCCAAAGGTGGCCAAAAGATTTCCCCAGA...TTGTTTTATCACTCTGGACTGTGCAGAGCCACCTGCCACCGAGATCTGCATTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp GCCAGCTCTGAGGTATCAAAGGAGCTCCGAGTGCAAGTTGAAGACTTCAGCAAGTGCTTCCCCGGGCTTTaGTCAGAGGTGTGGAGTGAT +
Preference number: 4 (lower is better)
Translates to: ASSEVSKELRVQVEDFSKCFPGL*SEVWSD
Trigger: ATCACTCCACACCTCTGACCAAAGCCCGGGGAAGCA...CTTGCTGAAGTCTTCAACTTGCACTCGGAGCTCCTTTGATACCTCAGAGCTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp TTTATGCGTGAGAAAACCAAGGCCCTGATGGTGTCCCTGGTCCAAGTCCAGTGCTTATGGTGTCAGCATTaGTACCACCACGCCGCAGGT +
Preference number: 4 (lower is better)
Translates to: FMREKTKALMVSLVQVQCLWCQH*YHHAAG
Trigger: ACCTGCGGCGTGGTGGTACCAATGCTGACACCATAA...GCACTGGACTTGGACCAGGGACACCATCAGGGCCTTGGTTTTCTCACGCATAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp TCGGCTTTCAAAAAGCTGTCAGCTCAGGTAGCACGCCTTGGTCTTGAATTCGGTTGGCGTCTGCCACGATaGTCTTGGCGAGAGACTTGG +
Preference number: 4 (lower is better)
Translates to: SAFKKLSAQVARLGLEFGWRLPR*SWRETW
Trigger: CCAAGTCTCTCGCCAAGACCATCGTGGCAGACGCCA...ACCGAATTCAAGACCAAGGCGTGCTACCTGAGCTGACAGCTTTTTGAAAGCCGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp GCCAGCTCTGAGGTATCAAAGGAGCTCCGAGTGCAAGTTGAAGACTTCAGCAAGGCTGAGGCAATGAGCTaGGCGCTACGGATTCCATCT +
Preference number: 4 (lower is better)
Translates to: ASSEVSKELRVQVEDFSKAEAMS*ALRIPS
Trigger: AGATGGAATCCGTAGCGCCCAGCTCATTGCCTCAGC...CTTGCTGAAGTCTTCAACTTGCACTCGGAGCTCCTTTGATACCTCAGAGCTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp AGAAACAGCTCGGCTTTCAAAAAGCTGTCAGCTCAGGTAGCACGCCTTGGTCTTCGGAGGTCATCGATGTaGACAGACTGCCACAGCCCT +
Preference number: 4 (lower is better)
Translates to: RNSSAFKKLSAQVARLGLRRSSM*TDCHSP
Trigger: AGGGCTGTGGCAGTCTGTCCACATCGATGACCTCCG...AAGACCAAGGCGTGCTACCTGAGCTGACAGCTTTTTGAAAGCCGAGCTGTTTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp CACGCCGCAGACGAGGAGAGAGGAGTCTTCTCTCCAAAGTCATCCAAAGATAGCTTCTCAGCAGCCTGGTaGTGTCCAGGATCGACACAT +
Preference number: 4 (lower is better)
Translates to: HAADEERGVFSPKSSKDSFSAAW*CPGSTH
Trigger: ATGTGTCGATCCTGGACACCACCAGGCTGCTGAGAA...GCTATCTTTGGATGACTTTGGAGAGAAGACTCCTCTCTCCTCGTCTGCGGCGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp GGAATGCAGATCTCGGTGGCAGGTGGCTCTGCACAGTCCAGAGTGATAAAACAACGCAAGAAAGAGGCGTaGCACGCGTCATCCTCATTC +
Preference number: 4 (lower is better)
Translates to: GMQISVAGGSAQSRVIKQRKKEA*HASSSF
Trigger: GAATGAGGATGACGCGTGCCACGCCTCTTTCTTGCG...TTGTTTTATCACTCTGGACTGTGCAGAGCCACCTGCCACCGAGATCTGCATTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp ATCAAGTCCACGCCGCAGACGAGGAGAGAGGAGTCTTCTCTCCAAAGTCATCCAGCGGAGTATCTGGCCTaGTCAGTAACTCTAGGTTGC +
Preference number: 4 (lower is better)
Translates to: IKSTPQTRREESSLQSHPAEYLA*SVTLGC
Trigger: GCAACCTAGAGTTACTGACCAGGCCAGATACTCCGC...TGGATGACTTTGGAGAGAAGACTCCTCTCTCCTCGTCTGCGGCGTGGACTTGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp CAGATCTCGGTGGCAGGTGGCTCTGCACAGTCCAGAGTGATAAAACAATCACAGCATCCAGCCAGCTCATaGTTCCAACGGGCTTCCATC +
Preference number: 4 (lower is better)
Translates to: QISVAGGSAQSRVIKQSQHPASS*FQRASI
Trigger: GATGGAAGCCCGTTGGAACCATGAGCTGGCTGGATG...CTGTGATTGTTTTATCACTCTGGACTGTGCAGAGCCACCTGCCACCGAGATCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp ACCACAGAAAGGACTAGATATTCATACATGCGAGAGCACACTGAGACTGCATGTTCCCTGATGACAGCCTaGGCCAGGCTCCCGCTGCCT +
Preference number: 4 (lower is better)
Translates to: TTERTRYSYMREHTETACSLMTA*ARLPLP
Trigger: AGGCAGCGGGAGCCTGGCCCAGGCTGTCATCAGGGA...ACATGCAGTCTCAGTGTGCTCTCGCATGTATGAATATCTAGTCCTTTCTGTGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp GTTCTAGACCACAGGTTTCTCGCCTGGAAGAACCTTTCCTTTTTGGAAGAGAAATCCCTGATGACAGCCTaGGCCAGGCTCCCGCTGCCT +
Preference number: 4 (lower is better)
Translates to: VLDHRFLAWKNLSFLEEKSLMTA*ARLPLP
Trigger: AGGCAGCGGGAGCCTGGCCCAGGCTGTCATCAGGGA...TTTCTCTTCCAAAAAGGAAAGGTTCTTCCAGGCGAGAAACCTGTGGTCTAGAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR CCA 90 bp GCACGCCTTGGTCTTGAATTCGGTGCTACGCTGACAGCTCTCCTTCTGAATGCACCACGAAGAGTGCGGTaGAGAAAATCCGACTCCACT +
Preference number: 4 (lower is better)
Translates to: ARLGLEFGATLTALLLNAPRRVR*RKSDST
Trigger: AGTGGAGTCGGATTTTCTCCACCGCACTCTTCGTGG...TGCATTCAGAAGGAGAGCTGTCAGCGTAGCACCGAATTCAAGACCAAGGCGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp TCAGCTCCACTGTGGAGTCGCCAGGATGCTGTCATTTTGTCCAGAGGAAAAGTCCATCTCCCAGGCAGATaGAGCACGGCTGAATCCCAA +
Preference number: 4 (lower is better)
Translates to: SAPLWSRQDAVILSRGKVHLPGR*STAESQ
Trigger: TTGGGATTCAGCCGTGCTCCATCTGCCTGGGAGATG...GACTTTTCCTCTGGACAAAATGACAGCATCCTGGCGACTCCACAGTGGAGCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR CCA 90 bp CACGCCGCAGACGAGGAGAGAGGAGTCTTCTCTCCAAAGTCATCCAAAGATAGCCTTAAGCGCCCCTTTTaGACGAAGAGGAGAGAGAGC +
Preference number: 4 (lower is better)
Translates to: HAADEERGVFSPKSSKDSLKRPF*TKRRES
Trigger: GCTCTCTCTCCTCTTCGTCCAAAAGGGGCGCTTAAG...GCTATCTTTGGATGACTTTGGAGAGAAGACTCCTCTCTCCTCGTCTGCGGCGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp GCCAGCTCTGAGGTATCAAAGGAGCTCCGAGTGCAAGTTGAAGACTTCAGCAAGATTTCAGGCAGGGCATaGGGGACTCCTTCTGAGGCA +
Preference number: 4 (lower is better)
Translates to: ASSEVSKELRVQVEDFSKISGRA*GTPSEA
Trigger: TGCCTCAGAAGGAGTCCCCCATGCCCTGCCTGAAAT...CTTGCTGAAGTCTTCAACTTGCACTCGGAGCTCCTTTGATACCTCAGAGCTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR CCA 90 bp TCGGCTTTCAAAAAGCTGTCAGCTCAGGTAGCACGCCTTGGTCTTGAATTCGGTCAGGCCTGTCTGGGCTaGGCTGTGTGTCAGCTTTGT +
Preference number: 4 (lower is better)
Translates to: SAFKKLSAQVARLGLEFGQACLG*AVCQLC
Trigger: ACAAAGCTGACACACAGCCCAGCCCAGACAGGCCTG...ACCGAATTCAAGACCAAGGCGTGCTACCTGAGCTGACAGCTTTTTGAAAGCCGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR TCA 90 bp ATTGTTTATGCCTGCAGAGGGGAGTGGGTGACTAGAGGGGAGGAGGATGATGGCGGATTGAATGGGAAATaGAGAGAGATGATGGCGTGG +
Preference number: 4 (lower is better)
Translates to: IVYACRGEWVTRGEEDDGGLNGK*REMMAW
Trigger: CCACGCCATCATCTCTCTTCATTTCCCATTCAATCC...GCCATCATCCTCCTCCCCTCTAGTCACCCACTCCCCTCTGCAGGCATAAACAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319921.4
CDS-3UTR TCA 90 bp CAGATCTCGGTGGCAGGTGGCTCTGCACAGTCCAGAGTGATAAAACAATCACAGAGAAGCTGTTCAGGTTaGTGGTGTCCCAGGTCTGCA +
Preference number: 4 (lower is better)
Translates to: QISVAGGSAQSRVIKQSQRSCSG*WCPRSA
Trigger: TGCAGACCTGGGACACCATCAACCTGAACAGCTTCT...CTGTGATTGTTTTATCACTCTGGACTGTGCAGAGCCACCTGCCACCGAGATCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp CACGCCGCAGACGAGGAGAGAGGAGTCTTCTCTCCAAAGTCATCCAAAGATAGCTTGTCTTTGACCAGATaGAAGCCGTCCCGAGGTTTG +
Preference number: 4 (lower is better)
Translates to: HAADEERGVFSPKSSKDSLSLTR*KPSRGL
Trigger: CAAACCTCGGGACGGCTTTCATCTGGTCAAAGACAA...GCTATCTTTGGATGACTTTGGAGAGAAGACTCCTCTCTCCTCGTCTGCGGCGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp TCGGCTTTCAAAAAGCTGTCAGCTCAGGTAGCACGCCTTGGTCTTGAATTCGGTCTGCCTCAACCCATCTaGGCTGTGCTTGCTGAGGAA +
Preference number: 4 (lower is better)
Translates to: SAFKKLSAQVARLGLEFGLPQPI*AVLAEE
Trigger: TTCCTCAGCAAGCACAGCTCAGATGGGTTGAGGCAG...ACCGAATTCAAGACCAAGGCGTGCTACCTGAGCTGACAGCTTTTTGAAAGCCGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp TTTATGCGTGAGAAAACCAAGGCCCTGATGGTGTCCCTGGTCCAAGTCCAGTGCTCAGAAACCCCAGAGTaGCTTCTACGACAGACAGCA +
Preference number: 4 (lower is better)
Translates to: FMREKTKALMVSLVQVQCSETPE*LLRQTA
Trigger: TGCTGTCTGTCGTAGAAGTCACTCTGGGGTTTCTGA...GCACTGGACTTGGACCAGGGACACCATCAGGGCCTTGGTTTTCTCACGCATAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp CAGATCTCGGTGGCAGGTGGCTCTGCACAGTCCAGAGTGATAAAACAATCACAGGCGTCTAGGCCAGTCTaGTTTAGGAATGTGCTGAGG +
Preference number: 4 (lower is better)
Translates to: QISVAGGSAQSRVIKQSQASRPV*FRNVLR
Trigger: CCTCAGCACATTCCTAAATCAGACTGGCCTAGACGC...CTGTGATTGTTTTATCACTCTGGACTGTGCAGAGCCACCTGCCACCGAGATCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp TCGGCTTTCAAAAAGCTGTCAGCTCAGGTAGCACGCCTTGGTCTTGAATTCGGTAGAAAACCAAGGCCCTaGTGGTGTCCCTGGTCCAAG +
Preference number: 4 (lower is better)
Translates to: SAFKKLSAQVARLGLEFGRKPRP*WCPWSK
Trigger: CTTGGACCAGGGACACCATCAGGGCCTTGGTTTTCT...ACCGAATTCAAGACCAAGGCGTGCTACCTGAGCTGACAGCTTTTTGAAAGCCGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp ATCAAGTCCACGCCGCAGACGAGGAGAGAGGAGTCTTCTCTCCAAAGTCATCCACAAGGTGTGCATGGCTaGGTCCTGGACAAGCATTTT +
Preference number: 4 (lower is better)
Translates to: IKSTPQTRREESSLQSHPQGVHG*VLDKHF
Trigger: AAAATGCTTGTCCAGGACTCAGCCATGCACACCTTG...TGGATGACTTTGGAGAGAAGACTCCTCTCTCCTCGTCTGCGGCGTGGACTTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp TTTATGCGTGAGAAAACCAAGGCCCTGATGGTGTCCCTGGTCCAAGTCCAGTGCGGTGATGGTATTCCTTaGTCTGTTCGACTCGGTCCT +
Preference number: 4 (lower is better)
Translates to: FMREKTKALMVSLVQVQCGDGIP*SVRLGP
Trigger: AGGACCGAGTCGAACAGATCAAGGAATACCATCACC...GCACTGGACTTGGACCAGGGACACCATCAGGGCCTTGGTTTTCTCACGCATAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp CACGCCGCAGACGAGGAGAGAGGAGTCTTCTCTCCAAAGTCATCCAAAGATAGCACAGCCTGGTGCAGGTaGTGGTATTCCTTGATCTGT +
Preference number: 4 (lower is better)
Translates to: HAADEERGVFSPKSSKDSTAWCR*WYSLIC
Trigger: ACAGATCAAGGAATACCATCACCTGCACCAGGCTGT...GCTATCTTTGGATGACTTTGGAGAGAAGACTCCTCTCTCCTCGTCTGCGGCGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp CACGCCGCAGACGAGGAGAGAGGAGTCTTCTCTCCAAAGTCATCCAAAGATAGCCGTTCCACAGACCCATaGCTCTCATTCACAGTCTTC +
Preference number: 4 (lower is better)
Translates to: HAADEERGVFSPKSSKDSRSTDP*LSFTVF
Trigger: GAAGACTGTGAATGAGAGTCATGGGTCTGTGGAACG...GCTATCTTTGGATGACTTTGGAGAGAAGACTCCTCTCTCCTCGTCTGCGGCGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp ACTGCGTGTGTGGCTGAGCTACAAGTCTCCTGGAATGTAAACAATGTTGGTTTAGGCCAGGGTCAGGGATaGGCGTTCCACAGACCCATG +
Preference number: 4 (lower is better)
Translates to: TACVAELQVSWNVNNVGLGQGQG*AFHRPM
Trigger: CATGGGTCTGTGGAACGCTCATCCCTGACCCTGGCC...TAAACCAACATTGTTTACATTCCAGGAGACTTGTAGCTCAGCCACACACGCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp CACGCCGCAGACGAGGAGAGAGGAGTCTTCTCTCCAAAGTCATCCAAAGATAGCACTGCAGAAGACCTCTaGAAACCTCTCCACTTCCGT +
Preference number: 4 (lower is better)
Translates to: HAADEERGVFSPKSSKDSTAEDL*KPLHFR
Trigger: ACGGAAGTGGAGAGGTTTTCAGAGGTCTTCTGCAGT...GCTATCTTTGGATGACTTTGGAGAGAAGACTCCTCTCTCCTCGTCTGCGGCGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp TGCACTTTCCTGGCGCTTGTTTTTCCAGCTGGAAACGGGATTCGTAATGGTAATGCGGGAGCTCTTCCATaGCTCTCCTCATGCGGTACC +
Preference number: 4 (lower is better)
Translates to: CTFLALVFPAGNGIRNGNAGALP*LSSCGT
Trigger: GGTACCGCATGAGGAGAGTCATGGAAGAGCTCCCGC...ATTACCATTACGAATCCCGTTTCCAGCTGGAAAAACAAGCGCCAGGAAAGTGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR TCA 90 bp AGGACTAGATATTCATACATGCGAGAGCACACTGAGACTGCATGTTTATTTGGCCCCATCCCTGCCAGGTaGGCCAGACAGTGGCCAAGG +
Preference number: 4 (lower is better)
Translates to: RTRYSYMREHTETACLFGPIPAR*ARQWPR
Trigger: CCTTGGCCACTGTCTGGCTCACCTGGCAGGGATGGG...GCCAAATAAACATGCAGTCTCAGTGTGCTCTCGCATGTATGAATATCTAGTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp AGAAACAGCTCGGCTTTCAAAAAGCTGTCAGCTCAGGTAGCACGCCTTGGTCTTCGGCTCTCATCCACCTaGGGGTCGATCAGTCGAATT +
Preference number: 4 (lower is better)
Translates to: RNSSAFKKLSAQVARLGLRLSST*GSISRI
Trigger: AATTCGACTGATCGACCCTCAGGTGGATGAGAGCCG...AAGACCAAGGCGTGCTACCTGAGCTGACAGCTTTTTGAAAGCCGAGCTGTTTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp GGAATGCAGATCTCGGTGGCAGGTGGCTCTGCACAGTCCAGAGTGATAAAACAATGGGAGGCCTGCAGGTaGCTTTTGGGAAGATGTCAA +
Preference number: 4 (lower is better)
Translates to: GMQISVAGGSAQSRVIKQWEACR*LLGRCQ
Trigger: TTGACATCTTCCCAAAAGTCACCTGCAGGCCTCCCA...TTGTTTTATCACTCTGGACTGTGCAGAGCCACCTGCCACCGAGATCTGCATTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp GCACCAGTCCATGATCAAGTCCACGCCGCAGACGAGGAGAGAGGAGTCTTCTCTAAAGTTCCGAAGCTCTaGCCAGGATGGGTTTATTAC +
Preference number: 4 (lower is better)
Translates to: APVHDQVHAADEERGVFSKVPKL*PGWVYY
Trigger: GTAATAAACCCATCCTGGTCAGAGCTTCGGAACTTT...AGAGAAGACTCCTCTCTCCTCGTCTGCGGCGTGGACTTGATCATGGACTGGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp GCACGCCTTGGTCTTGAATTCGGTGCTACGCTGACAGCTCTCCTTCTGAATGCAGTCAGAGGTGTGGAGTaGTGGTGTGGCAAAATCTCT +
Preference number: 4 (lower is better)
Translates to: ARLGLEFGATLTALLLNAVRGVE*WCGKIS
Trigger: AGAGATTTTGCCACACCATCACTCCACACCTCTGAC...TGCATTCAGAAGGAGAGCTGTCAGCGTAGCACCGAATTCAAGACCAAGGCGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp GCACGCCTTGGTCTTGAATTCGGTGCTACGCTGACAGCTCTCCTTCTGAATGCAGCAGATGGAAGCCGATaGATGTCATGGTTGTGTGGT +
Preference number: 4 (lower is better)
Translates to: ARLGLEFGATLTALLLNAADGSR*MSWLCG
Trigger: ACCACACAACCATGACATTCATCGGCTTCCATCTGC...TGCATTCAGAAGGAGAGCTGTCAGCGTAGCACCGAATTCAAGACCAAGGCGTGC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp CACGCCGCAGACGAGGAGAGAGGAGTCTTCTCTCCAAAGTCATCCAAAGATAGCGCAGATGGAAGCCGATaGATGTCATGGTTGTGTGGT +
Preference number: 4 (lower is better)
Translates to: HAADEERGVFSPKSSKDSADGSR*MSWLCG
Trigger: ACCACACAACCATGACATTCATCGGCTTCCATCTGC...GCTATCTTTGGATGACTTTGGAGAGAAGACTCCTCTCTCCTCGTCTGCGGCGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp ATCAAGTCCACGCCGCAGACGAGGAGAGAGGAGTCTTCTCTCCAAAGTCATCCACGGTGTGATTTTTGCTaGCGCTGGACTTGGAGAGAA +
Preference number: 4 (lower is better)
Translates to: IKSTPQTRREESSLQSHPRCDFC*RWTWRE
Trigger: TTCTCTCCAAGTCCAGCGTCAGCAAAAATCACACCG...TGGATGACTTTGGAGAGAAGACTCCTCTCTCCTCGTCTGCGGCGTGGACTTGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp TCGGCTTTCAAAAAGCTGTCAGCTCAGGTAGCACGCCTTGGTCTTGAATTCGGTGGACGTAGTACTGGTTaGGTGCGTCGTAGAGGCTCT +
Preference number: 4 (lower is better)
Translates to: SAFKKLSAQVARLGLEFGGRSTG*VRRRGS
Trigger: AGAGCCTCTACGACGCACTCAACCAGTACTACGTCC...ACCGAATTCAAGACCAAGGCGTGCTACCTGAGCTGACAGCTTTTTGAAAGCCGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp GGAATGCAGATCTCGGTGGCAGGTGGCTCTGCACAGTCCAGAGTGATAAAACAATTGTGCCTCTGTCTGTaGAAGTACTCCTGCGACAGC +
Preference number: 4 (lower is better)
Translates to: GMQISVAGGSAQSRVIKQLCLCL*KYSCDS
Trigger: GCTGTCGCAGGAGTACTTTCACAGACAGAGGCACAA...TTGTTTTATCACTCTGGACTGTGCAGAGCCACCTGCCACCGAGATCTGCATTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp TGCACTTTCCTGGCGCTTGTTTTTCCAGCTGGAAACGGGATTCGTAATGGTAATGCAGGGCAGACAAAGTaGGTCTTCCGGTGCAGGCCA +
Preference number: 4 (lower is better)
Translates to: CTFLALVFPAGNGIRNGNAGQTK*VFRCRP
Trigger: TGGCCTGCACCGGAAGACTCACTTTGTCTGCCCTGC...ATTACCATTACGAATCCCGTTTCCAGCTGGAAAAACAAGCGCCAGGAAAGTGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR TCA 90 bp AGAGGTGTAAGCGTTTCAGTCCCAGATCGGCTACAGGGAGTGGCGCTCAGCTCCTACTTGGCCCTGAGCTaGCATTTTCTTCCCAATATT +
Preference number: 4 (lower is better)
Translates to: RGVSVSVPDRLQGVALSSYLALS*HFLPNI
Trigger: AATATTGGGAAGAAAATGTCAGCTCAGGGCCAAGTA...GGAGCTGAGCGCCACTCCCTGTAGCCGATCTGGGACTGAAACGCTTACACCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR GCA 90 bp CTGGACTTCCCCTGTGGCCGCAAGGCTGTGCTTGTACAGGGGTTAAGTGTCCAATGGAAATGCAGACAATaGCTTCAACAAGAACGCGGT +
Preference number: 4 (lower is better)
Translates to: LDFPCGRKAVLVQGLSVQWKCRQ*LQQERG
Trigger: ACCGCGTTCTTGTTGAAGGCATTGTCTGCATTTCCA...TTGGACACTTAACCCCTGTACAAGCACAGCCTTGCGGCCACAGGGGAAGTCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319921.4
CDS-3UTR GCA 90 bp GCACCAGTCCATGATCAAGTCCACGCCGCAGACGAGGAGAGAGGAGTCTTCTCTATCGGTCCACAGCTGTaGCTGTCCTTCATAAATCAT +
Preference number: 4 (lower is better)
Translates to: APVHDQVHAADEERGVFSIGPQL*LSFINH
Trigger: ATGATTTATGAAGGACAGGCACAGCTGTGGACCGAT...AGAGAAGACTCCTCTCTCCTCGTCTGCGGCGTGGACTTGATCATGGACTGGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp ATCAAGTCCACGCCGCAGACGAGGAGAGAGGAGTCTTCTCTCCAAAGTCATCCACAGGCAAAAAGTCCGTaGTTTTTCCGTCCGGCAATG +
Preference number: 4 (lower is better)
Translates to: IKSTPQTRREESSLQSHPQAKSP*FFRPAM
Trigger: CATTGCCGGACGGAAAAAGCACGGACTTTTTGCCTG...TGGATGACTTTGGAGAGAAGACTCCTCTCTCCTCGTCTGCGGCGTGGACTTGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp CACTGGTGGCACCATGACAGTGAGGAGAACGGAGCACAGTTCCTTCCGTGCCTCACAACCAGTCCAGGCTaGCTTCTAATAAAAGCTCAA +
Preference number: 4 (lower is better)
Translates to: HWWHHDSEENGAQFLPCLTTSPG*LLIKAQ
Trigger: TTGAGCTTTTATTAGAAGGCAGCCTGGACTGGTTGT...GAGGCACGGAAGGAACTGTGCTCCGTTCTCCTCACTGTCATGGTGCCACCAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp GCCAGCTCTGAGGTATCAAAGGAGCTCCGAGTGCAAGTTGAAGACTTCAGCAAGTGCGTATTCAAGACTTaGTCAAGTCCCGGAAGCCGG +
Preference number: 4 (lower is better)
Translates to: ASSEVSKELRVQVEDFSKCVFKT*SSPGSR
Trigger: CCGGCTTCCGGGACTTGAGCAAGTCTTGAATACGCA...CTTGCTGAAGTCTTCAACTTGCACTCGGAGCTCCTTTGATACCTCAGAGCTGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp ACCACAGAAAGGACTAGATATTCATACATGCGAGAGCACACTGAGACTGCATGTACCAGGTACACCCGGTaGCAGTCGTTCTCCACCCGG +
Preference number: 4 (lower is better)
Translates to: TTERTRYSYMREHTETACTRYTR*QSFSTR
Trigger: CCGGGTGGAGAACGACTGGCACCGGGTGTACCTGGT...ACATGCAGTCTCAGTGTGCTCTCGCATGTATGAATATCTAGTCCTTTCTGTGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp TTCCAGCAGGGTCTCAAAGGAAGTAATGGGCATAAATCAAAAGGCGCTGCTGATTGCCGCAGCCCCTGCTaGTTGACAACGTCCTTGGGA +
Preference number: 4 (lower is better)
Translates to: FQQGLKGSNGHKSKGAADCRSPC*LTTSLG
Trigger: TCCCAAGGACGTTGTCAAGCAGCAGGGGCTGCGGCA...ATCAGCAGCGCCTTTTGATTTATGCCCATTACTTCCTTTGAGACCCTGCTGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000573038.1
CDS-3UTR GCA 90 bp GTCTCAAAGGAAGTAATGGGCATAAATCAAAAGGCGCTGCTGATGGACTTGGCATCCTGCCGCAGCCCCTaGTGCTTGACAACGTCCTTG +
Preference number: 4 (lower is better)
Translates to: VSKEVMGINQKALLMDLASCRSP*CLTTSL
Trigger: CAAGGACGTTGTCAAGCAGCAGGGGCTGCGGCAGGA...TGCCAAGTCCATCAGCAGCGCCTTTTGATTTATGCCCATTACTTCCTTTGAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000573038.1
CDS-3UTR GCA 90 bp ATCAAGTCCACGCCGCAGACGAGGAGAGAGGAGTCTTCTCTCCAAAGTCATCCAGTCCACGAGCGATGTTaGAAAACGGCTGATATCAGG +
Preference number: 4 (lower is better)
Translates to: IKSTPQTRREESSLQSHPVHERC*KTADIR
Trigger: CCTGATATCAGCCGTTTTGCAACATCGCTCGTGGAC...TGGATGACTTTGGAGAGAAGACTCCTCTCTCCTCGTCTGCGGCGTGGACTTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp ATCAAGTCCACGCCGCAGACGAGGAGAGAGGAGTCTTCTCTCCAAAGTCATCCAACACAGAAGGACGGCTaGAGCATGAATGGCCATTTC +
Preference number: 4 (lower is better)
Translates to: IKSTPQTRREESSLQSHPTQKDG*SMNGHF
Trigger: GAAATGGCCATTCATGCTGCAGCCGTCCTTCTGTGT...TGGATGACTTTGGAGAGAAGACTCCTCTCTCCTCGTCTGCGGCGTGGACTTGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp TCGGCTTTCAAAAAGCTGTCAGCTCAGGTAGCACGCCTTGGTCTTGAATTCGGTGGCAGTCAATGCAGATaGTCTGTTCCATCGGCCTGC +
Preference number: 4 (lower is better)
Translates to: SAFKKLSAQVARLGLEFGGSQCR*SVPSAC
Trigger: GCAGGCCGATGGAACAGAGCATCTGCATTGACTGCC...ACCGAATTCAAGACCAAGGCGTGCTACCTGAGCTGACAGCTTTTTGAAAGCCGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp TTTCAGGCAGGGCATGGGGGACTCCTTCTGAGGCAGAGGTGTAAGCGTTTCAGTTCCTTCAGGATGTGCTaGTGCAGAAAGCCTTTTGGA +
Preference number: 4 (lower is better)
Translates to: FQAGHGGLLLRQRCKRFSSFRMC*CRKPFG
Trigger: TCCAAAAGGCTTTCTGCAGCAGCACATCCTGAAGGA...ACTGAAACGCTTACACCTCTGCCTCAGAAGGAGTCCCCCATGCCCTGCCTGAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR GCA 90 bp TTTCAGGCAGGGCATGGGGGACTCCTTCTGAGGCAGAGGTGTAAGCGTTTCAGTAGGTCCTTCAGGATGTaGTGCTGCAGAAAGCCTTTT +
Preference number: 4 (lower is better)
Translates to: FQAGHGGLLLRQRCKRFSRSFRM*CCRKPF
Trigger: AAAAGGCTTTCTGCAGCAGCACATCCTGAAGGACCT...ACTGAAACGCTTACACCTCTGCCTCAGAAGGAGTCCCCCATGCCCTGCCTGAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR GCA 90 bp TTTCAGGCAGGGCATGGGGGACTCCTTCTGAGGCAGAGGTGTAAGCGTTTCAGTTGGACGTTCTGGAACTaGTTCACTAGATCCCTTTGC +
Preference number: 4 (lower is better)
Translates to: FQAGHGGLLLRQRCKRFSWTFWN*FTRSLC
Trigger: GCAAAGGGATCTAGTGAAGCAGTTCCAGAACGTCCA...ACTGAAACGCTTACACCTCTGCCTCAGAAGGAGTCCCCCATGCCCTGCCTGAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR GCA 90 bp GGAATGCAGATCTCGGTGGCAGGTGGCTCTGCACAGTCCAGAGTGATAAAACAAAACCCATCTGAGCTGTaGTTGCTGAGGAAGCCTCTG +
Preference number: 4 (lower is better)
Translates to: GMQISVAGGSAQSRVIKQNPSEL*LLRKPL
Trigger: CAGAGGCTTCCTCAGCAAGCACAGCTCAGATGGGTT...TTGTTTTATCACTCTGGACTGTGCAGAGCCACCTGCCACCGAGATCTGCATTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp GCACCAGTCCATGATCAAGTCCACGCCGCAGACGAGGAGAGAGGAGTCTTCTCTAAGATTATCATTTCGTaGAGCTCTAGCAGGAAGGCG +
Preference number: 4 (lower is better)
Translates to: APVHDQVHAADEERGVFSKIIIS*SSSRKA
Trigger: CGCCTTCCTGCTAGAGCTGCACGAAATGATAATCTT...AGAGAAGACTCCTCTCTCCTCGTCTGCGGCGTGGACTTGATCATGGACTGGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp GCCAGCTCTGAGGTATCAAAGGAGCTCCGAGTGCAAGTTGAAGACTTCAGCAAGAAGTCAGTTACTGCCTaGAGTCTGGGTCACTCTGCC +
Preference number: 4 (lower is better)
Translates to: ASSEVSKELRVQVEDFSKKSVTA*SLGHSA
Trigger: GGCAGAGTGACCCAGACTGCAGGCAGTAACTGACTT...CTTGCTGAAGTCTTCAACTTGCACTCGGAGCTCCTTTGATACCTCAGAGCTGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp GCACCAGTCCATGATCAAGTCCACGCCGCAGACGAGGAGAGAGGAGTCTTCTCTGTCCAACTAAAATCGTaGCACTTAGGAGGTCACCAA +
Preference number: 4 (lower is better)
Translates to: APVHDQVHAADEERGVFSVQLKS*HLGGHQ
Trigger: TTGGTGACCTCCTAAGTGGCACGATTTTAGTTGGAC...AGAGAAGACTCCTCTCTCCTCGTCTGCGGCGTGGACTTGATCATGGACTGGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp GCACGCCTTGGTCTTGAATTCGGTGCTACGCTGACAGCTCTCCTTCTGAATGCACCTTCTCCAATCCAGTaGTTCCTCCACAGCACATTG +
Preference number: 4 (lower is better)
Translates to: ARLGLEFGATLTALLLNAPSPIQ*FLHSTL
Trigger: CAATGTGCTGTGGAGGAAGCACTGGATTGGAGAAGG...TGCATTCAGAAGGAGAGCTGTCAGCGTAGCACCGAATTCAAGACCAAGGCGTGC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp TGCACTTTCCTGGCGCTTGTTTTTCCAGCTGGAAACGGGATTCGTAATGGTAATAGACCCACCCATCCCTaGCAGGTGAGCCAGACAGTG +
Preference number: 4 (lower is better)
Translates to: CTFLALVFPAGNGIRNGNRPTHP*QVSQTV
Trigger: CACTGTCTGGCTCACCTGGCAGGGATGGGTGGGTCT...ATTACCATTACGAATCCCGTTTCCAGCTGGAAAAACAAGCGCCAGGAAAGTGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR GCA 90 bp GGAATGCAGATCTCGGTGGCAGGTGGCTCTGCACAGTCCAGAGTGATAAAACAACTCGGTGCTGCTGCGTaGACAGATTGTGGAAAAGCT +
Preference number: 4 (lower is better)
Translates to: GMQISVAGGSAQSRVIKQLGAAA*TDCGKA
Trigger: AGCTTTTCCACAATCTGTGCACGCAGCAGCACCGAG...TTGTTTTATCACTCTGGACTGTGCAGAGCCACCTGCCACCGAGATCTGCATTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp GCACGCCTTGGTCTTGAATTCGGTGCTACGCTGACAGCTCTCCTTCTGAATGCATCTTCTCGGTGCTGCTaGGTGCACAGATTGTGGAAA +
Preference number: 4 (lower is better)
Translates to: ARLGLEFGATLTALLLNASSRCC*VHRLWK
Trigger: TTTCCACAATCTGTGCACGCAGCAGCACCGAGAAGA...TGCATTCAGAAGGAGAGCTGTCAGCGTAGCACCGAATTCAAGACCAAGGCGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp AGAAACAGCTCGGCTTTCAAAAAGCTGTCAGCTCAGGTAGCACGCCTTGGTCTTTCCATGGTGACCATGTaGTTCCCCGGGCTTTGGTCA +
Preference number: 4 (lower is better)
Translates to: RNSSAFKKLSAQVARLGLSMVTM*FPGLWS
Trigger: TGACCAAAGCCCGGGGAAGCACATGGTCACCATGGA...AAGACCAAGGCGTGCTACCTGAGCTGACAGCTTTTTGAAAGCCGAGCTGTTTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp TCAAGTCCACGCCGCAGACGAGGAGAGAGGAGTCTTCTCTCCAAAGTCATCCAAGCAGTTGTTCCTCCGTaGACCTTGACCAGCTTTATG +
Preference number: 4 (lower is better)
Translates to: SSPRRRRGERSLLSKVIQAVVPP*TLTSFM
Trigger: CATAAAGCTGGTCAAGGTGCACGGAGGAACAACTGC...TTGGATGACTTTGGAGAGAAGACTCCTCTCTCCTCGTCTGCGGCGTGGACTTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp CAGATCTCGGTGGCAGGTGGCTCTGCACAGTCCAGAGTGATAAAACAATCACAGCAGGCAGCTATAATATaGAGGCCAGAGTCCTCAGCC +
Preference number: 4 (lower is better)
Translates to: QISVAGGSAQSRVIKQSQQAAII*RPESSA
Trigger: GGCTGAGGACTCTGGCCTGCATATTATAGCTGCCTG...CTGTGATTGTTTTATCACTCTGGACTGTGCAGAGCCACCTGCCACCGAGATCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp CAGATCTCGGTGGCAGGTGGCTCTGCACAGTCCAGAGTGATAAAACAATCACAGCATCCAGAAGCAGCCTaGTGTCGTCATACGGTTTCG +
Preference number: 4 (lower is better)
Translates to: QISVAGGSAQSRVIKQSQHPEAA*CRHTVS
Trigger: CGAAACCGTATGACGACAGCAGGCTGCTTCTGGATG...CTGTGATTGTTTTATCACTCTGGACTGTGCAGAGCCACCTGCCACCGAGATCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp ACTGCGTGTGTGGCTGAGCTACAAGTCTCCTGGAATGTAAACAATGTTGGTTTACGAGAGACTTGGAGCTaGCGGGCTTCCCCACCAGGA +
Preference number: 4 (lower is better)
Translates to: TACVAELQVSWNVNNVGLRETWS*RASPPG
Trigger: TCCTGGTGGGGAAGCCCGGCAGCTCCAAGTCTCTCG...TAAACCAACATTGTTTACATTCCAGGAGACTTGTAGCTCAGCCACACACGCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp ATCAAGTCCACGCCGCAGACGAGGAGAGAGGAGTCTTCTCTCCAAAGTCATCCACTGCAGGATCTGCAGTaGCACGTAGTTTTTGGTCAG +
Preference number: 4 (lower is better)
Translates to: IKSTPQTRREESSLQSHPLQDLQ*HVVFGQ
Trigger: CTGACCAAAAACTACGTGGCACTGCAGATCCTGCAG...TGGATGACTTTGGAGAGAAGACTCCTCTCTCCTCGTCTGCGGCGTGGACTTGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp ATCAAGTCCACGCCGCAGACGAGGAGAGAGGAGTCTTCTCTCCAAAGTCATCCAAGAGCTCCTCCACGATaGTCTTCTGCCATTTCTCCA +
Preference number: 4 (lower is better)
Translates to: IKSTPQTRREESSLQSHPRAPPR*SSAISP
Trigger: TGGAGAAATGGCAGAAGAGCATCGTGGAGGAGCTCT...TGGATGACTTTGGAGAGAAGACTCCTCTCTCCTCGTCTGCGGCGTGGACTTGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp AGCTCCGAGTGCAAGTTGAAGACTTCAGCAAGCCAGCCCCCGGCCCCCACACCCCTTCTGGAAATGATGTaGTTTGACATTGATGAACTT +
Preference number: 4 (lower is better)
Translates to: SSECKLKTSASQPPAPTPLLEMM*FDIDEL
Trigger: AAGTTCATCAATGTCAAAGCACATCATTTCCAGAAG...GGGTGTGGGGGCCGGGGGCTGGCTTGCTGAAGTCTTCAACTTGCACTCGGAGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp TCGGCTTTCAAAAAGCTGTCAGCTCAGGTAGCACGCCTTGGTCTTGAATTCGGTTCGGTGTCAAACTGCTaGAGCCACAGGAGTGTGGGT +
Preference number: 4 (lower is better)
Translates to: SAFKKLSAQVARLGLEFGSVSNC*SHRSVG
Trigger: ACCCACACTCCTGTGGCTGCAGCAGTTTGACACCGA...ACCGAATTCAAGACCAAGGCGTGCTACCTGAGCTGACAGCTTTTTGAAAGCCGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp GCACGCCTTGGTCTTGAATTCGGTGCTACGCTGACAGCTCTCCTTCTGAATGCACTGATGGTGACATGCTaGAGCCTGGTCACATCAGAA +
Preference number: 4 (lower is better)
Translates to: ARLGLEFGATLTALLLNALMVTC*SLVTSE
Trigger: TTCTGATGTGACCAGGCTGCAGCATGTCACCATCAG...TGCATTCAGAAGGAGAGCTGTCAGCGTAGCACCGAATTCAAGACCAAGGCGTGC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp ATCAAGTCCACGCCGCAGACGAGGAGAGAGGAGTCTTCTCTCCAAAGTCATCCAGGATCGACACATCACTaGCTCCGAGTTCAGAGGTTT +
Preference number: 4 (lower is better)
Translates to: IKSTPQTRREESSLQSHPGSTHH*LRVQRF
Trigger: AAACCTCTGAACTCGGAGGCAGTGATGTGTCGATCC...TGGATGACTTTGGAGAGAAGACTCCTCTCTCCTCGTCTGCGGCGTGGACTTGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp GATGAGAAAGTTTCAGAACATGTATGTACATGGTTCAGAAACAGCTCGGCTTTCGGCTCGGCTGGCCAGTaGGGCCACTCTGCTGGGCTT +
Preference number: 4 (lower is better)
Translates to: DEKVSEHVCTWFRNSSAFGSAGQ*GHSAGL
Trigger: AAGCCCAGCAGAGTGGCCCCACTGGCCAGCCGAGCC...GAAAGCCGAGCTGTTTCTGAACCATGTACATACATGTTCTGAAACTTTCTCATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp GAGTCCTGGACAAGCATTTTGTATTTTTGTAGTTCTCACTCCTTAGGCCCAATTTGTCGCCAACCTCGGTaGGCGCGGAGAGGCCGTCAC +
Preference number: 4 (lower is better)
Translates to: ESWTSILYFCSSHSLGPICRQPR*ARRGRH
Trigger: GTGACGGCCTCTCCGCGCCCACCGAGGTTGGCGACA...AATTGGGCCTAAGGAGTGAGAACTACAAAAATACAAAATGCTTGTCCAGGACTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp ACAGTGATGACAGGGCCATCTGAGGAACGGCCTGCAAGCCCGTGTGACTTGTGCCTGATGAAGACTTTATaGAGGTCAGGATTGAATGGG +
Preference number: 4 (lower is better)
Translates to: TVMTGPSEERPASPCDLCLMKTL*RSGLNG
Trigger: CCCATTCAATCCTGACCTCCATAAAGTCTTCATCAG...GCACAAGTCACACGGGCTTGCAGGCCGTTCCTCAGATGGCCCTGTCATCACTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319921.4
CDS-3UTR CCA 90 bp GCACGCCTTGGTCTTGAATTCGGTGCTACGCTGACAGCTCTCCTTCTGAATGCACATGACCCAAGTCTCTaGTGTAGTGCAGCTCACAGA +
Preference number: 4 (lower is better)
Translates to: ARLGLEFGATLTALLLNAHDPSL*CSAAHR
Trigger: TCTGTGAGCTGCACTACACCAGAGACTTGGGTCATG...TGCATTCAGAAGGAGAGCTGTCAGCGTAGCACCGAATTCAAGACCAAGGCGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp ATTGTTTATGCCTGCAGAGGGGAGTGGGTGACTAGAGGGGAGGAGGATGATGGCCAAAACTGCTCGAACTaGGTGAAGAAGCTGTTCAGG +
Preference number: 4 (lower is better)
Translates to: IVYACRGEWVTRGEEDDGQNCSN*VKKLFR
Trigger: CCTGAACAGCTTCTTCACCCAGTTCGAGCAGTTTTG...GCCATCATCCTCCTCCCCTCTAGTCACCCACTCCCCTCTGCAGGCATAAACAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000319921.4
CDS-3UTR CCA 90 bp GTTCTAGACCACAGGTTTCTCGCCTGGAAGAACCTTTCCTTTTTGGAAGAGAAAAACTCCATCCCCCGCTaGCTGCTGAGCTTCCGCACC +
Preference number: 4 (lower is better)
Translates to: VLDHRFLAWKNLSFLEEKNSIPR*LLSFRT
Trigger: GGTGCGGAAGCTCAGCAGCCAGCGGGGGATGGAGTT...TTTCTCTTCCAAAAAGGAAAGGTTCTTCCAGGCGAGAAACCTGTGGTCTAGAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR CCA 90 bp AGAAACAGCTCGGCTTTCAAAAAGCTGTCAGCTCAGGTAGCACGCCTTGGTCTTACTCGAGGACAGCTTTaGCCACAGCATCACGGAGAG +
Preference number: 4 (lower is better)
Translates to: RNSSAFKKLSAQVARLGLTRGQL*PQHHGE
Trigger: CTCTCCGTGATGCTGTGGCCAAAGCTGTCCTCGAGT...AAGACCAAGGCGTGCTACCTGAGCTGACAGCTTTTTGAAAGCCGAGCTGTTTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp GCACGCCTTGGTCTTGAATTCGGTGCTACGCTGACAGCTCTCCTTCTGAATGCATCCTCCACCTGGTACTaGCAGTTGGAGAGAATCAGT +
Preference number: 4 (lower is better)
Translates to: ARLGLEFGATLTALLLNASSTWY*QLERIS
Trigger: ACTGATTCTCTCCAACTGCCAGTACCAGGTGGAGGA...TGCATTCAGAAGGAGAGCTGTCAGCGTAGCACCGAATTCAAGACCAAGGCGTGC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp TTTATGCGTGAGAAAACCAAGGCCCTGATGGTGTCCCTGGTCCAAGTCCAGTGCATTCAGCTGCATGTTTaGATCCCCACCAGCTGTGCT +
Preference number: 4 (lower is better)
Translates to: FMREKTKALMVSLVQVQCIQLHV*IPTSCA
Trigger: AGCACAGCTGGTGGGGATCCAAACATGCAGCTGAAT...GCACTGGACTTGGACCAGGGACACCATCAGGGCCTTGGTTTTCTCACGCATAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp GCACGCCTTGGTCTTGAATTCGGTGCTACGCTGACAGCTCTCCTTCTGAATGCAACTGATTTCCCCAAATaGCTCTTTGTGCAGCCGCAG +
Preference number: 4 (lower is better)
Translates to: ARLGLEFGATLTALLLNATDFPK*LFVQPQ
Trigger: CTGCGGCTGCACAAAGAGCCATTTGGGGAAATCAGT...TGCATTCAGAAGGAGAGCTGTCAGCGTAGCACCGAATTCAAGACCAAGGCGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp TCAAGTCCACGCCGCAGACGAGGAGAGAGGAGTCTTCTCTCCAAAGTCATCCAATTCATCAGACACTGGTaGCACCATGACAGTGAGGAG +
Preference number: 4 (lower is better)
Translates to: SSPRRRRGERSLLSKVIQFIRHW*HHDSEE
Trigger: CTCCTCACTGTCATGGTGCCACCAGTGTCTGATGAA...TTGGATGACTTTGGAGAGAAGACTCCTCTCTCCTCGTCTGCGGCGTGGACTTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp TCGGCTTTCAAAAAGCTGTCAGCTCAGGTAGCACGCCTTGGTCTTGAATTCGGTACCCCTGAAGGATACTaGTCTGAGACTGGCAGGCTG +
Preference number: 4 (lower is better)
Translates to: SAFKKLSAQVARLGLEFGTPEGY*SETGRL
Trigger: CAGCCTGCCAGTCTCAGACCAGTATCCTTCAGGGGT...ACCGAATTCAAGACCAAGGCGTGCTACCTGAGCTGACAGCTTTTTGAAAGCCGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp TCAAGTCCACGCCGCAGACGAGGAGAGAGGAGTCTTCTCTCCAAAGTCATCCAATTGATCCAATCTCTTTaGTCCTGGTGGTCCACGGTG +
Preference number: 4 (lower is better)
Translates to: SSPRRRRGERSLLSKVIQLIQSL*SWWSTV
Trigger: CACCGTGGACCACCAGGACCAAAGAGATTGGATCAA...TTGGATGACTTTGGAGAGAAGACTCCTCTCTCCTCGTCTGCGGCGTGGACTTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp TCAGCTCCACTGTGGAGTCGCCAGGATGCTGTCATTTTGTCCAGAGGAAAAGTCGCCTGGATGAGCTCCTaGTTGATCTGGTCCAGTGTT +
Preference number: 4 (lower is better)
Translates to: SAPLWSRQDAVILSRGKVAWMSS*LIWSSV
Trigger: AACACTGGACCAGATCAACCAGGAGCTCATCCAGGC...GACTTTTCCTCTGGACAAAATGACAGCATCCTGGCGACTCCACAGTGGAGCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR CCA 90 bp TTTCAGGCAGGGCATGGGGGACTCCTTCTGAGGCAGAGGTGTAAGCGTTTCAGTATGTTGGGCTGCAGATaGAAGCCGATGAATGTCATG +
Preference number: 4 (lower is better)
Translates to: FQAGHGGLLLRQRCKRFSMLGCR*KPMNVM
Trigger: CATGACATTCATCGGCTTCCATCTGCAGCCCAACAT...ACTGAAACGCTTACACCTCTGCCTCAGAAGGAGTCCCCCATGCCCTGCCTGAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR CCA 90 bp GCACCAGTCCATGATCAAGTCCACGCCGCAGACGAGGAGAGAGGAGTCTTCTCTGATGTTGGTCCTTATTaGCGAAGGCCACATTTTCAG +
Preference number: 4 (lower is better)
Translates to: APVHDQVHAADEERGVFSDVGPY*RRPHFQ
Trigger: CTGAAAATGTGGCCTTCGCCAATAAGGACCAACATC...AGAGAAGACTCCTCTCTCCTCGTCTGCGGCGTGGACTTGATCATGGACTGGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp GCACCAGTCCATGATCAAGTCCACGCCGCAGACGAGGAGAGAGGAGTCTTCTCTGAAAGAACCTGGCGATaGCTTTCCGATATGAGTCTT +
Preference number: 4 (lower is better)
Translates to: APVHDQVHAADEERGVFSERTWR*LSDMSL
Trigger: AAGACTCATATCGGAAAGCCATCGCCAGGTTCTTTC...AGAGAAGACTCCTCTCTCCTCGTCTGCGGCGTGGACTTGATCATGGACTGGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp TTTATGCGTGAGAAAACCAAGGCCCTGATGGTGTCCCTGGTCCAAGTCCAGTGCTGGCCTCGGGCAAATTaGCCAGAAAGATGTCCAAAG +
Preference number: 4 (lower is better)
Translates to: FMREKTKALMVSLVQVQCWPRAN*PERCPK
Trigger: CTTTGGACATCTTTCTGGCCAATTTGCCCGAGGCCA...GCACTGGACTTGGACCAGGGACACCATCAGGGCCTTGGTTTTCTCACGCATAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp GCCAGCTCTGAGGTATCAAAGGAGCTCCGAGTGCAAGTTGAAGACTTCAGCAAGATAATCTCCGGCTGCTaGTCCCCCTCGAAGAATGTC +
Preference number: 4 (lower is better)
Translates to: ASSEVSKELRVQVEDFSKIISGC*SPSKNV
Trigger: GACATTCTTCGAGGGGGACCAGCAGCCGGAGATTAT...CTTGCTGAAGTCTTCAACTTGCACTCGGAGCTCCTTTGATACCTCAGAGCTGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp ACTGCGTGTGTGGCTGAGCTACAAGTCTCCTGGAATGTAAACAATGTTGGTTTACGACATTTGACGCGGTaGGTCCCCAGACCGAGGTCC +
Preference number: 4 (lower is better)
Translates to: TACVAELQVSWNVNNVGLRHLTR*VPRPRS
Trigger: GGACCTCGGTCTGGGGACCCACCGCGTCAAATGTCG...TAAACCAACATTGTTTACATTCCAGGAGACTTGTAGCTCAGCCACACACGCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp TCAGCTCCACTGTGGAGTCGCCAGGATGCTGTCATTTTGTCCAGAGGAAAAGTCGCGGAGTATCTGGCCTaGTCAGTAACTCTAGGTTGC +
Preference number: 4 (lower is better)
Translates to: SAPLWSRQDAVILSRGKVAEYLA*SVTLGC
Trigger: GCAACCTAGAGTTACTGACCAGGCCAGATACTCCGC...GACTTTTCCTCTGGACAAAATGACAGCATCCTGGCGACTCCACAGTGGAGCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR CCA 90 bp CAGATCTCGGTGGCAGGTGGCTCTGCACAGTCCAGAGTGATAAAACAATCACAGTGTCCACGAACTTCTTaGGCAGTCCTTCTGCGTCTG +
Preference number: 4 (lower is better)
Translates to: QISVAGGSAQSRVIKQSQCPRTS*AVLLRL
Trigger: CAGACGCAGAAGGACTGCCCAAGAAGTTCGTGGACA...CTGTGATTGTTTTATCACTCTGGACTGTGCAGAGCCACCTGCCACCGAGATCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp AGGACTAGATATTCATACATGCGAGAGCACACTGAGACTGCATGTTTATTTGGCCGCAGGCAGTGCACGTaGTCGCAGGGCAGACAGACG +
Preference number: 4 (lower is better)
Translates to: RTRYSYMREHTETACLFGRRQCT*SQGRQT
Trigger: CGTCTGTCTGCCCTGCGACCACGTGCACTGCCTGCG...GCCAAATAAACATGCAGTCTCAGTGTGCTCTCGCATGTATGAATATCTAGTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp AGAAACAGCTCGGCTTTCAAAAAGCTGTCAGCTCAGGTAGCACGCCTTGGTCTTGGGCATGCTTTTCAATaGCTTCCCTGTGCGCTTGGG +
Preference number: 4 (lower is better)
Translates to: RNSSAFKKLSAQVARLGLGHAFQ*LPCALG
Trigger: CCCAAGCGCACAGGGAAGCCATTGAAAAGCATGCCC...AAGACCAAGGCGTGCTACCTGAGCTGACAGCTTTTTGAAAGCCGAGCTGTTTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp TTCCAAAGACCAGTCTTACCAAGTTTCAGATGTCTGGACTCCAAGTGGCAGTTCCGCTCAGCTCCACTGTaGAGTCGCCAGGATGCTGTC +
Preference number: 4 (lower is better)
Translates to: FQRPVLPSFRCLDSKWQFRSAPL*SRQDAV
Trigger: GACAGCATCCTGGCGACTCCACAGTGGAGCTGAGCG...GAACTGCCACTTGGAGTCCAGACATCTGAAACTTGGTAAGACTGGTCTTTGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR CCA 90 bp GCAAATCTGTCAACCCAGCTCAACTGTCATAGCTGTCCTGTTCCAGCCACTGGTGATGGGCTGCATCAGTaGTCCATCACCCTGCATCAT +
Preference number: 4 (lower is better)
Translates to: ANLSTQLNCHSCPVPATGDGLHQ*SITLHH
Trigger: ATGATGCAGGGTGATGGACCACTGATGCAGCCCATC...ACCAGTGGCTGGAACAGGACAGCTATGACAGTTGAGCTGGGTTGACAGATTTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573038.1
CDS-3UTR CCA 90 bp AGAGGTGTAAGCGTTTCAGTCCCAGATCGGCTACAGGGAGTGGCGCTCAGCTCCCAGGCTGTCTGCTTGTaGATTTCATTTCTGCCTTTT +
Preference number: 4 (lower is better)
Translates to: RGVSVSVPDRLQGVALSSQAVCL*ISFLPF
Trigger: AAAAGGCAGAAATGAAATCCACAAGCAGACAGCCTG...GGAGCTGAGCGCCACTCCCTGTAGCCGATCTGGGACTGAAACGCTTACACCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR CCA 90 bp TGCACTTTCCTGGCGCTTGTTTTTCCAGCTGGAAACGGGATTCGTAATGGTAATCCATGTCGCTCAAGCTaGCTGGAGTCCTCCACAGGG +
Preference number: 4 (lower is better)
Translates to: CTFLALVFPAGNGIRNGNPCRSS*LESSTG
Trigger: CCCTGTGGAGGACTCCAGCCAGCTTGAGCGACATGG...ATTACCATTACGAATCCCGTTTCCAGCTGGAAAAACAAGCGCCAGGAAAGTGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR TCA 90 bp ACCACAGAAAGGACTAGATATTCATACATGCGAGAGCACACTGAGACTGCATGTAATTGCGGGCTGCTCTaGGCCTCACTTCCTGTGGCC +
Preference number: 4 (lower is better)
Translates to: TTERTRYSYMREHTETACNCGLL*ASLPVA
Trigger: GGCCACAGGAAGTGAGGCTCAGAGCAGCCCGCAATT...ACATGCAGTCTCAGTGTGCTCTCGCATGTATGAATATCTAGTCCTTTCTGTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp ACCACAGAAAGGACTAGATATTCATACATGCGAGAGCACACTGAGACTGCATGTAACTGCCATAGAGGCTaGGGCCCCTGCCTGTTGCTC +
Preference number: 4 (lower is better)
Translates to: TTERTRYSYMREHTETACNCHRG*GPCLLL
Trigger: GAGCAACAGGCAGGGGCCTCAGCCTCTATGGCAGTT...ACATGCAGTCTCAGTGTGCTCTCGCATGTATGAATATCTAGTCCTTTCTGTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp ATCAAGTCCACGCCGCAGACGAGGAGAGAGGAGTCTTCTCTCCAAAGTCATCCAGGATTGAATGGGAAATaGAGAGAGATGATGGCGTGG +
Preference number: 4 (lower is better)
Translates to: IKSTPQTRREESSLQSHPGLNGK*REMMAW
Trigger: CCACGCCATCATCTCTCTTCATTTCCCATTCAATCC...TGGATGACTTTGGAGAGAAGACTCCTCTCTCCTCGTCTGCGGCGTGGACTTGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp AGGAGGATGATGGCTAAAGGGGCCGGGTTTCTCTTTGAAGTGATGAAAATGCTCTCTGAGGTTAGGAGGTaGCACAACCAGTCCAGGCTG +
Preference number: 4 (lower is better)
Translates to: RRMMAKGAGFLFEVMKMLSEVRR*HNQSRL
Trigger: CAGCCTGGACTGGTTGTGTCACCTCCTAACCTCAGA...GAGCATTTTCATCACTTCAAAGAGAAACCCGGCCCCTTTAGCCATCATCCTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319921.4
CDS-3UTR TCA 90 bp AGAAACAGCTCGGCTTTCAAAAAGCTGTCAGCTCAGGTAGCACGCCTTGGTCTTAGACAGTCCAGGATATaGGCAGGAAAACGACCCAGG +
Preference number: 4 (lower is better)
Translates to: RNSSAFKKLSAQVARLGLRQSRI*AGKRPR
Trigger: CCTGGGTCGTTTTCCTGCTCATATCCTGGACTGTCT...AAGACCAAGGCGTGCTACCTGAGCTGACAGCTTTTTGAAAGCCGAGCTGTTTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp GGGGAGTCTAAAACCAGCTGTAACCAAGTGTCTGTGTACGGGAACTGGTGTGGGCCGGTAGTAAATCCCTaGAAGACAGTCCAGGATATG +
Preference number: 4 (lower is better)
Translates to: GESKTSCNQVSVYGNWCGPVVNP*KTVQDM
Trigger: CATATCCTGGACTGTCTTTCAGGGATTTACTACCGG...CCCACACCAGTTCCCGTACACAGACACTTGGTTACAGCTGGTTTTAGACTCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR TCA 90 bp TCGGCTTTCAAAAAGCTGTCAGCTCAGGTAGCACGCCTTGGTCTTGAATTCGGTTATTGCAGTAGGCAGTaGTCTGGGAGAGGGGTTCCT +
Preference number: 4 (lower is better)
Translates to: SAFKKLSAQVARLGLEFGYCSRQ*SGRGVP
Trigger: AGGAACCCCTCTCCCAGATCACTGCCTACTGCAATA...ACCGAATTCAAGACCAAGGCGTGCTACCTGAGCTGACAGCTTTTTGAAAGCCGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp AGGAGGATGATGGCTAAAGGGGCCGGGTTTCTCTTTGAAGTGATGAAAATGCTCCCACTTCCCAATCTCTaGGTTAGCGGAGGAGCTGAG +
Preference number: 4 (lower is better)
Translates to: RRMMAKGAGFLFEVMKMLPLPNL*VSGGAE
Trigger: CTCAGCTCCTCCGCTAACTCAGAGATTGGGAAGTGG...GAGCATTTTCATCACTTCAAAGAGAAACCCGGCCCCTTTAGCCATCATCCTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319921.4
CDS-3UTR TCA 90 bp GGAATGCAGATCTCGGTGGCAGGTGGCTCTGCACAGTCCAGAGTGATAAAACAAGCTGATATCAGGAGGTaGAAGGATCTTGCATTCGCC +
Preference number: 4 (lower is better)
Translates to: GMQISVAGGSAQSRVIKQADIRR*KDLAFA
Trigger: GGCGAATGCAAGATCCTTTCACCTCCTGATATCAGC...TTGTTTTATCACTCTGGACTGTGCAGAGCCACCTGCCACCGAGATCTGCATTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp TCGGCTTTCAAAAAGCTGTCAGCTCAGGTAGCACGCCTTGGTCTTGAATTCGGTTGTCTGCCTTGTCTTTaGCCAGATGAAAGCCGTCCC +
Preference number: 4 (lower is better)
Translates to: SAFKKLSAQVARLGLEFGCLPCL*PDESRP
Trigger: GGGACGGCTTTCATCTGGTCAAAGACAAGGCAGACA...ACCGAATTCAAGACCAAGGCGTGCTACCTGAGCTGACAGCTTTTTGAAAGCCGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp AGAAACAGCTCGGCTTTCAAAAAGCTGTCAGCTCAGGTAGCACGCCTTGGTCTTAGAAGCAGAGCCAAGTaGGTGAGTAGCCGGATAAGG +
Preference number: 4 (lower is better)
Translates to: RNSSAFKKLSAQVARLGLRSRAK*VSSRIR
Trigger: CCTTATCCGGCTACTCACTCACTTGGCTCTGCTTCT...AAGACCAAGGCGTGCTACCTGAGCTGACAGCTTTTTGAAAGCCGAGCTGTTTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp TTTATGCGTGAGAAAACCAAGGCCCTGATGGTGTCCCTGGTCCAAGTCCAGTGCTGGACAGAAAGACTGTaGTCCTGTTGTGAAGCAGCT +
Preference number: 4 (lower is better)
Translates to: FMREKTKALMVSLVQVQCWTERL*SCCEAA
Trigger: AGCTGCTTCACAACAGGATCACAGTCTTTCTGTCCA...GCACTGGACTTGGACCAGGGACACCATCAGGGCCTTGGTTTTCTCACGCATAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp GCACGCCTTGGTCTTGAATTCGGTGCTACGCTGACAGCTCTCCTTCTGAATGCAAGTCTTTGGGTAGGTTaGTCTCACCGTTCGTCTCAA +
Preference number: 4 (lower is better)
Translates to: ARLGLEFGATLTALLLNASLWVG*SHRSSQ
Trigger: TTGAGACGAACGGTGAGATCAACCTACCCAAAGACT...TGCATTCAGAAGGAGAGCTGTCAGCGTAGCACCGAATTCAAGACCAAGGCGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp GCACCAGTCCATGATCAAGTCCACGCCGCAGACGAGGAGAGAGGAGTCTTCTCTCTTTGTACCTTGAACTaGTTTCCCCAAATGGCTCTT +
Preference number: 4 (lower is better)
Translates to: APVHDQVHAADEERGVFSLCTLN*FPQMAL
Trigger: AAGAGCCATTTGGGGAAATCAGTTCAAGGTACAAAG...AGAGAAGACTCCTCTCTCCTCGTCTGCGGCGTGGACTTGATCATGGACTGGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp GCCAGCTCTGAGGTATCAAAGGAGCTCCGAGTGCAAGTTGAAGACTTCAGCAAGACTGCTGAGGTCTTGTaGGTGTCTTACTGCAAGCAC +
Preference number: 4 (lower is better)
Translates to: ASSEVSKELRVQVEDFSKTAEVL*VSYCKH
Trigger: GTGCTTGCAGTAAGACACTCACAAGACCTCAGCAGT...CTTGCTGAAGTCTTCAACTTGCACTCGGAGCTCCTTTGATACCTCAGAGCTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp ATCAAGTCCACGCCGCAGACGAGGAGAGAGGAGTCTTCTCTCCAAAGTCATCCACAATCTCTGCAAGGGTaGCCTCTCCTGACTTTAGAT +
Preference number: 4 (lower is better)
Translates to: IKSTPQTRREESSLQSHPQSLQG*PLLTLD
Trigger: ATCTAAAGTCAGGAGAGGTCACCCTTGCAGAGATTG...TGGATGACTTTGGAGAGAAGACTCCTCTCTCCTCGTCTGCGGCGTGGACTTGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp GGAATGCAGATCTCGGTGGCAGGTGGCTCTGCACAGTCCAGAGTGATAAAACAAGTTCGACTCGGTCCTTaGTCCAATCTCTTTGGTCCT +
Preference number: 4 (lower is better)
Translates to: GMQISVAGGSAQSRVIKQVRLGP*SNLFGP
Trigger: AGGACCAAAGAGATTGGATCAAGGACCGAGTCGAAC...TTGTTTTATCACTCTGGACTGTGCAGAGCCACCTGCCACCGAGATCTGCATTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp CAGATCTCGGTGGCAGGTGGCTCTGCACAGTCCAGAGTGATAAAACAATCACAGACAGCCTGGTGCAGGTaGTGGTATTCCTTGATCTGT +
Preference number: 4 (lower is better)
Translates to: QISVAGGSAQSRVIKQSQTAWCR*WYSLIC
Trigger: ACAGATCAAGGAATACCATCACCTGCACCAGGCTGT...CTGTGATTGTTTTATCACTCTGGACTGTGCAGAGCCACCTGCCACCGAGATCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp ACTGCGTGTGTGGCTGAGCTACAAGTCTCCTGGAATGTAAACAATGTTGGTTTATGCACCGGGCCTCGCTaGTGTCCTGGAGCAGCTTTT +
Preference number: 4 (lower is better)
Translates to: TACVAELQVSWNVNNVGLCTGPR*CPGAAF
Trigger: AAAAGCTGCTCCAGGACATCAGCGAGGCCCGGTGCA...TAAACCAACATTGTTTACATTCCAGGAGACTTGTAGCTCAGCCACACACGCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp GTTCTAGACCACAGGTTTCTCGCCTGGAAGAACCTTTCCTTTTTGGAAGAGAAAGAGGTCACGTCCAGGTaGAAGAGCACGGGGACCTTC +
Preference number: 4 (lower is better)
Translates to: VLDHRFLAWKNLSFLEEKEVTSR*KSTGTF
Trigger: GAAGGTCCCCGTGCTCTTTCACCTGGACGTGACCTC...TTTCTCTTCCAAAAAGGAAAGGTTCTTCCAGGCGAGAAACCTGTGGTCTAGAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR TCA 90 bp GCACGCCTTGGTCTTGAATTCGGTGCTACGCTGACAGCTCTCCTTCTGAATGCAAAGATGGTGTCCAACTaGTGTTGGTCCTTATTGGCG +
Preference number: 4 (lower is better)
Translates to: ARLGLEFGATLTALLLNAKMVSN*CWSLLA
Trigger: CGCCAATAAGGACCAACATCAGTTGGACACCATCTT...TGCATTCAGAAGGAGAGCTGTCAGCGTAGCACCGAATTCAAGACCAAGGCGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp CACGCCGCAGACGAGGAGAGAGGAGTCTTCTCTCCAAAGTCATCCAAAGATAGCTGGCCATCCACCATATaGTCACACAGGACTTCTTTG +
Preference number: 4 (lower is better)
Translates to: HAADEERGVFSPKSSKDSWPSTI*SHRTSL
Trigger: CAAAGAAGTCCTGTGTGATCATATGGTGGATGGCCA...GCTATCTTTGGATGACTTTGGAGAGAAGACTCCTCTCTCCTCGTCTGCGGCGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp CAGATCTCGGTGGCAGGTGGCTCTGCACAGTCCAGAGTGATAAAACAATCACAGTGCAGACGACCATCATaGAGACGTTCTCCTTCAAGG +
Preference number: 4 (lower is better)
Translates to: QISVAGGSAQSRVIKQSQCRRPS*RRSPSR
Trigger: CCTTGAAGGAGAACGTCTTCATGATGGTCGTCTGCA...CTGTGATTGTTTTATCACTCTGGACTGTGCAGAGCCACCTGCCACCGAGATCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp ATCAAGTCCACGCCGCAGACGAGGAGAGAGGAGTCTTCTCTCCAAAGTCATCCACGTCTTTCTCTTCAATaGCAATCAGGCGGAAGTTGG +
Preference number: 4 (lower is better)
Translates to: IKSTPQTRREESSLQSHPRLSLQ*QSGGSW
Trigger: CCAACTTCCGCCTGATTGTCATTGAAGAGAAAGACG...TGGATGACTTTGGAGAGAAGACTCCTCTCTCCTCGTCTGCGGCGTGGACTTGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp GGGGAGTCTAAAACCAGCTGTAACCAAGTGTCTGTGTACGGGAACTGGTGTGGGCGTCTTTCTCTTCAATaGCAATCAGGCGGAAGTTGG +
Preference number: 4 (lower is better)
Translates to: GESKTSCNQVSVYGNWCGRLSLQ*QSGGSW
Trigger: CCAACTTCCGCCTGATTGTCATTGAAGAGAAAGACG...CCCACACCAGTTCCCGTACACAGACACTTGGTTACAGCTGGTTTTAGACTCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR TCA 90 bp AGAAACAGCTCGGCTTTCAAAAAGCTGTCAGCTCAGGTAGCACGCCTTGGTCTTTCACATCAGAAACCATaGGGGTGGATCTCCGGAGGT +
Preference number: 4 (lower is better)
Translates to: RNSSAFKKLSAQVARLGLSHQKP*GWISGG
Trigger: ACCTCCGGAGATCCACCCTCATGGTTTCTGATGTGA...AAGACCAAGGCGTGCTACCTGAGCTGACAGCTTTTTGAAAGCCGAGCTGTTTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp GTTCTAGACCACAGGTTTCTCGCCTGGAAGAACCTTTCCTTTTTGGAAGAGAAATCTCGTTCTGGTCTCTaGGCATGCCCACGGCGCTCT +
Preference number: 4 (lower is better)
Translates to: VLDHRFLAWKNLSFLEEKSRSGL*ACPRRS
Trigger: AGAGCGCCGTGGGCATGCTCAGAGACCAGAACGAGA...TTTCTCTTCCAAAAAGGAAAGGTTCTTCCAGGCGAGAAACCTGTGGTCTAGAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR TCA 90 bp AGAAACAGCTCGGCTTTCAAAAAGCTGTCAGCTCAGGTAGCACGCCTTGGTCTTAACCACTCCAGAGGGTaGAACTGGCTCTCTTCTTGC +
Preference number: 4 (lower is better)
Translates to: RNSSAFKKLSAQVARLGLNHSRG*NWLSSC
Trigger: GCAAGAAGAGAGCCAGTTTCACCCTCTGGAGTGGTT...AAGACCAAGGCGTGCTACCTGAGCTGACAGCTTTTTGAAAGCCGAGCTGTTTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp GCCAGCTCTGAGGTATCAAAGGAGCTCCGAGTGCAAGTTGAAGACTTCAGCAAGTGCCGTCTCTGTCGATaGATGATATCATGCTCGCCA +
Preference number: 4 (lower is better)
Translates to: ASSEVSKELRVQVEDFSKCRLCR*MISCSP
Trigger: TGGCGAGCATGATATCATTCATCGACAGAGACGGCA...CTTGCTGAAGTCTTCAACTTGCACTCGGAGCTCCTTTGATACCTCAGAGCTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp CACGCCGCAGACGAGGAGAGAGGAGTCTTCTCTCCAAAGTCATCCAAAGATAGCGTATCACTGAGCGGATaGCAGGAGTCTTATCCACAA +
Preference number: 4 (lower is better)
Translates to: HAADEERGVFSPKSSKDSVSLSG*QESYPQ
Trigger: TTGTGGATAAGACTCCTGTCATCCGCTCAGTGATAC...GCTATCTTTGGATGACTTTGGAGAGAAGACTCCTCTCTCCTCGTCTGCGGCGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp CACGCCGCAGACGAGGAGAGAGGAGTCTTCTCTCCAAAGTCATCCAAAGATAGCCAGTTTCAGTATCACTaGGCGGATGACAGGAGTCTT +
Preference number: 4 (lower is better)
Translates to: HAADEERGVFSPKSSKDSQFQYH*ADDRSL
Trigger: AAGACTCCTGTCATCCGCTCAGTGATACTGAAACTG...GCTATCTTTGGATGACTTTGGAGAGAAGACTCCTCTCTCCTCGTCTGCGGCGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp ATCAAGTCCACGCCGCAGACGAGGAGAGAGGAGTCTTCTCTCCAAAGTCATCCACAGTTTCAGTATCACTaGGCGGATGACAGGAGTCTT +
Preference number: 4 (lower is better)
Translates to: IKSTPQTRREESSLQSHPQFQYH*ADDRSL
Trigger: AAGACTCCTGTCATCCGCTCAGTGATACTGAAACTG...TGGATGACTTTGGAGAGAAGACTCCTCTCTCCTCGTCTGCGGCGTGGACTTGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp ACTGCGTGTGTGGCTGAGCTACAAGTCTCCTGGAATGTAAACAATGTTGGTTTAGAGGCCCCTGCCTGTTaGTCGGTGGTCTGCAGTTCT +
Preference number: 4 (lower is better)
Translates to: TACVAELQVSWNVNNVGLEAPAC*SVVCSS
Trigger: AGAACTGCAGACCACCGAGCAACAGGCAGGGGCCTC...TAAACCAACATTGTTTACATTCCAGGAGACTTGTAGCTCAGCCACACACGCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp TCAAGTCCACGCCGCAGACGAGGAGAGAGGAGTCTTCTCTCCAAAGTCATCCAATCTTTCTCCCTGTACTaGAAATCGGTCCACAGCTGT +
Preference number: 4 (lower is better)
Translates to: SSPRRRRGERSLLSKVIQSFSLY*KSVHSC
Trigger: ACAGCTGTGGACCGATTTGCAGTACAGGGAGAAAGA...TTGGATGACTTTGGAGAGAAGACTCCTCTCTCCTCGTCTGCGGCGTGGACTTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp GCCAGCTCTGAGGTATCAAAGGAGCTCCGAGTGCAAGTTGAAGACTTCAGCAAGCAGGCAAAAAGTCCGTaGTTTTTCCGTCCGGCAATG +
Preference number: 4 (lower is better)
Translates to: ASSEVSKELRVQVEDFSKQAKSP*FFRPAM
Trigger: CATTGCCGGACGGAAAAAGCACGGACTTTTTGCCTG...CTTGCTGAAGTCTTCAACTTGCACTCGGAGCTCCTTTGATACCTCAGAGCTGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp CTGGACTTCCCCTGTGGCCGCAAGGCTGTGCTTGTACAGGGGTTAAGTGTCCAAGGAAAACGACCCAGGTaGTCAATGAAGTTTTCCATA +
Preference number: 4 (lower is better)
Translates to: LDFPCGRKAVLVQGLSVQGKRPR*SMKFSI
Trigger: TATGGAAAACTTCATTGAGCACCTGGGTCGTTTTCC...TTGGACACTTAACCCCTGTACAAGCACAGCCTTGCGGCCACAGGGGAAGTCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000319921.4
CDS-3UTR GCA 90 bp TCGGCTTTCAAAAAGCTGTCAGCTCAGGTAGCACGCCTTGGTCTTGAATTCGGTTGCGTATTCAAGACTTaGTCAAGTCCCGGAAGCCGG +
Preference number: 4 (lower is better)
Translates to: SAFKKLSAQVARLGLEFGCVFKT*SSPGSR
Trigger: CCGGCTTCCGGGACTTGAGCAAGTCTTGAATACGCA...ACCGAATTCAAGACCAAGGCGTGCTACCTGAGCTGACAGCTTTTTGAAAGCCGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp GCACGCCTTGGTCTTGAATTCGGTGCTACGCTGACAGCTCTCCTTCTGAATGCACTGCAGATGGCTTCATaGAGTTTCAGACACACAGTC +
Preference number: 4 (lower is better)
Translates to: ARLGLEFGATLTALLLNALQMAS*SFRHTV
Trigger: GACTGTGTGTCTGAAACTGCATGAAGCCATCTGCAG...TGCATTCAGAAGGAGAGCTGTCAGCGTAGCACCGAATTCAAGACCAAGGCGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp CAGATCTCGGTGGCAGGTGGCTCTGCACAGTCCAGAGTGATAAAACAATCACAGGTCCACGAGCGATGTTaGAAAACGGCTGATATCAGG +
Preference number: 4 (lower is better)
Translates to: QISVAGGSAQSRVIKQSQVHERC*KTADIR
Trigger: CCTGATATCAGCCGTTTTGCAACATCGCTCGTGGAC...CTGTGATTGTTTTATCACTCTGGACTGTGCAGAGCCACCTGCCACCGAGATCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp GTTCTAGACCACAGGTTTCTCGCCTGGAAGAACCTTTCCTTTTTGGAAGAGAAATCTGTTCCATCGGCCTaGCACACTCTCCCACGGAGC +
Preference number: 4 (lower is better)
Translates to: VLDHRFLAWKNLSFLEEKSVPSA*HTLPRS
Trigger: GCTCCGTGGGAGAGTGTGGCAGGCCGATGGAACAGA...TTTCTCTTCCAAAAAGGAAAGGTTCTTCCAGGCGAGAAACCTGTGGTCTAGAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR GCA 90 bp GGAATGCAGATCTCGGTGGCAGGTGGCTCTGCACAGTCCAGAGTGATAAAACAAGGTCTGCGTTCTGTCTaGCTTGTCTTTGACCAGATG +
Preference number: 4 (lower is better)
Translates to: GMQISVAGGSAQSRVIKQGLRSV*LVFDQM
Trigger: CATCTGGTCAAAGACAAGGCAGACAGAACGCAGACC...TTGTTTTATCACTCTGGACTGTGCAGAGCCACCTGCCACCGAGATCTGCATTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp AGAGGTGTAAGCGTTTCAGTCCCAGATCGGCTACAGGGAGTGGCGCTCAGCTCCAGGGTTTTATCTAGATaGTCCAGTTCAGGAGAAATC +
Preference number: 4 (lower is better)
Translates to: RGVSVSVPDRLQGVALSSRVLSR*SSSGEI
Trigger: GATTTCTCCTGAACTGGAGCATCTAGATAAAACCCT...GGAGCTGAGCGCCACTCCCTGTAGCCGATCTGGGACTGAAACGCTTACACCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR GCA 90 bp TCAGCTCCACTGTGGAGTCGCCAGGATGCTGTCATTTTGTCCAGAGGAAAAGTCTCCTTCTGCAGGAAATaGCAGAGGATGGGCACTCTT +
Preference number: 4 (lower is better)
Translates to: SAPLWSRQDAVILSRGKVSFCRK*QRMGTL
Trigger: AAGAGTGCCCATCCTCTGGCATTTCCTGCAGAAGGA...GACTTTTCCTCTGGACAAAATGACAGCATCCTGGCGACTCCACAGTGGAGCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR GCA 90 bp GCACGCCTTGGTCTTGAATTCGGTGCTACGCTGACAGCTCTCCTTCTGAATGCAGAGCTGTATTCAACTTaGTGGACGTTCTGGAACTGC +
Preference number: 4 (lower is better)
Translates to: ARLGLEFGATLTALLLNAELYST*WTFWNC
Trigger: GCAGTTCCAGAACGTCCAGCAAGTTGAATACAGCTC...TGCATTCAGAAGGAGAGCTGTCAGCGTAGCACCGAATTCAAGACCAAGGCGTGC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp CAGATCTCGGTGGCAGGTGGCTCTGCACAGTCCAGAGTGATAAAACAATCACAGGGGGAGGGAGTCCTGTaGCATTTTGTTCTTGATGTC +
Preference number: 4 (lower is better)
Translates to: QISVAGGSAQSRVIKQSQGEGVL*HFVLDV
Trigger: GACATCAAGAACAAAATGGCACAGGACTCCCTCCCC...CTGTGATTGTTTTATCACTCTGGACTGTGCAGAGCCACCTGCCACCGAGATCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp AGGACTAGATATTCATACATGCGAGAGCACACTGAGACTGCATGTTTATTTGGCAAGAGGGGTGGGCAGTaGCAGAGGCGAACGGGCACA +
Preference number: 4 (lower is better)
Translates to: RTRYSYMREHTETACLFGKRGGQ*QRRTGT
Trigger: TGTGCCCGTTCGCCTCTGGCACTGCCCACCCCTCTT...GCCAAATAAACATGCAGTCTCAGTGTGCTCTCGCATGTATGAATATCTAGTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp AGAAACAGCTCGGCTTTCAAAAAGCTGTCAGCTCAGGTAGCACGCCTTGGTCTTAAGTCCGCAAAGAACTaGCAGAACCAGGCCTGTGAC +
Preference number: 4 (lower is better)
Translates to: RNSSAFKKLSAQVARLGLKSAKN*QNQACD
Trigger: GTCACAGGCCTGGTTCTGGCAGTTCTTTGCGGACTT...AAGACCAAGGCGTGCTACCTGAGCTGACAGCTTTTTGAAAGCCGAGCTGTTTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp GAGTCCTGGACAAGCATTTTGTATTTTTGTAGTTCTCACTCCTTAGGCCCAATTGCCTCCTGCCGGCGCTaGTCAAGGTGTGCATGGCTG +
Preference number: 4 (lower is better)
Translates to: ESWTSILYFCSSHSLGPIASCRR*SRCAWL
Trigger: CAGCCATGCACACCTTGAGCAGCGCCGGCAGGAGGC...AATTGGGCCTAAGGAGTGAGAACTACAAAAATACAAAATGCTTGTCCAGGACTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp TTCCAAAGACCAGTCTTACCAAGTTTCAGATGTCTGGACTCCAAGTGGCAGTTCAGTCTGGGTGTGAGCTaGCACCTGACAGCCAGCTCT +
Preference number: 4 (lower is better)
Translates to: FQRPVLPSFRCLDSKWQFSLGVS*HLTASS
Trigger: AGAGCTGGCTGTCAGGTGGCAGCTCACACCCAGACT...GAACTGCCACTTGGAGTCCAGACATCTGAAACTTGGTAAGACTGGTCTTTGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR GCA 90 bp GGAATGCAGATCTCGGTGGCAGGTGGCTCTGCACAGTCCAGAGTGATAAAACAATCAGGAAGGATCAAGTaGAGAACCGTGTCTGGGGAA +
Preference number: 4 (lower is better)
Translates to: GMQISVAGGSAQSRVIKQSGRIK*RTVSGE
Trigger: TTCCCCAGACACGGTTCTGCACTTGATCCTTCCTGA...TTGTTTTATCACTCTGGACTGTGCAGAGCCACCTGCCACCGAGATCTGCATTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp TCGGCTTTCAAAAAGCTGTCAGCTCAGGTAGCACGCCTTGGTCTTGAATTCGGTATATTCCCAGCAGAGTaGAGGTCGATGAAGGCCTGG +
Preference number: 4 (lower is better)
Translates to: SAFKKLSAQVARLGLEFGIFPAE*RSMKAW
Trigger: CCAGGCCTTCATCGACCTGCACTCTGCTGGGAATAT...ACCGAATTCAAGACCAAGGCGTGCTACCTGAGCTGACAGCTTTTTGAAAGCCGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp ACCACAGAAAGGACTAGATATTCATACATGCGAGAGCACACTGAGACTGCATGTGCATCACTCGGGGGCTaGTTCCTGAGCTCAGTGCTC +
Preference number: 4 (lower is better)
Translates to: TTERTRYSYMREHTETACASLGG*FLSSVL
Trigger: GAGCACTGAGCTCAGGAAGCAGCCCCCGAGTGATGC...ACATGCAGTCTCAGTGTGCTCTCGCATGTATGAATATCTAGTCCTTTCTGTGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp AGAGGTGTAAGCGTTTCAGTCCCAGATCGGCTACAGGGAGTGGCGCTCAGCTCCATCTTCATTTTGTCGTaGAACCTCTTCACGTACAGA +
Preference number: 4 (lower is better)
Translates to: RGVSVSVPDRLQGVALSSIFILS*NLFTYR
Trigger: TCTGTACGTGAAGAGGTTGCACGACAAAATGAAGAT...GGAGCTGAGCGCCACTCCCTGTAGCCGATCTGGGACTGAAACGCTTACACCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR GCA 90 bp TTCCAAAGACCAGTCTTACCAAGTTTCAGATGTCTGGACTCCAAGTGGCAGTTCGGCATTCCTCCGGGGTaGCTTCGACAGAGCCTTCTT +
Preference number: 4 (lower is better)
Translates to: FQRPVLPSFRCLDSKWQFGIPPG*LRQSLL
Trigger: AAGAAGGCTCTGTCGAAGGCACCCCGGAGGAATGCC...GAACTGCCACTTGGAGTCCAGACATCTGAAACTTGGTAAGACTGGTCTTTGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR GCA 90 bp AGAAACAGCTCGGCTTTCAAAAAGCTGTCAGCTCAGGTAGCACGCCTTGGTCTTCAGGCAGCTATAATATaGAGGCCAGAGTCCTCAGCC +
Preference number: 4 (lower is better)
Translates to: RNSSAFKKLSAQVARLGLQAAII*RPESSA
Trigger: GGCTGAGGACTCTGGCCTGCATATTATAGCTGCCTG...AAGACCAAGGCGTGCTACCTGAGCTGACAGCTTTTTGAAAGCCGAGCTGTTTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp ATCAAGTCCACGCCGCAGACGAGGAGAGAGGAGTCTTCTCTCCAAAGTCATCCAGCCTGTGCAATGTCTTaGGGGGAAGGCTTTCTATTT +
Preference number: 4 (lower is better)
Translates to: IKSTPQTRREESSLQSHPACAMS*GEGFLF
Trigger: AAATAGAAAGCCTTCCCCGCAAGACATTGCACAGGC...TGGATGACTTTGGAGAGAAGACTCCTCTCTCCTCGTCTGCGGCGTGGACTTGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp GGAATGCAGATCTCGGTGGCAGGTGGCTCTGCACAGTCCAGAGTGATAAAACAAGTAGTACTGGTTGAGTaGGTCGTAGAGGCTCTCGTA +
Preference number: 4 (lower is better)
Translates to: GMQISVAGGSAQSRVIKQVVLVE*VVEALV
Trigger: TACGAGAGCCTCTACGACGCACTCAACCAGTACTAC...TTGTTTTATCACTCTGGACTGTGCAGAGCCACCTGCCACCGAGATCTGCATTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp GCCAGCTCTGAGGTATCAAAGGAGCTCCGAGTGCAAGTTGAAGACTTCAGCAAGAGAGCTCCTCCACGATaGTCTTCTGCCATTTCTCCA +
Preference number: 4 (lower is better)
Translates to: ASSEVSKELRVQVEDFSKRAPPR*SSAISP
Trigger: TGGAGAAATGGCAGAAGAGCATCGTGGAGGAGCTCT...CTTGCTGAAGTCTTCAACTTGCACTCGGAGCTCCTTTGATACCTCAGAGCTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp TCGGCTTTCAAAAAGCTGTCAGCTCAGGTAGCACGCCTTGGTCTTGAATTCGGTTGGCTGATGGTGACATaGTGCAGCCTGGTCACATCA +
Preference number: 4 (lower is better)
Translates to: SAFKKLSAQVARLGLEFGWLMVT*CSLVTS
Trigger: TGATGTGACCAGGCTGCAGCATGTCACCATCAGCCA...ACCGAATTCAAGACCAAGGCGTGCTACCTGAGCTGACAGCTTTTTGAAAGCCGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp TTTATGCGTGAGAAAACCAAGGCCCTGATGGTGTCCCTGGTCCAAGTCCAGTGCGTGGTGCAGGCTGTCTaGTTGTGGATTTCATTTCTG +
Preference number: 4 (lower is better)
Translates to: FMREKTKALMVSLVQVQCVVQAV*LWISFL
Trigger: CAGAAATGAAATCCACAAGCAGACAGCCTGCACCAC...GCACTGGACTTGGACCAGGGACACCATCAGGGCCTTGGTTTTCTCACGCATAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR CCA 90 bp AGAAACAGCTCGGCTTTCAAAAAGCTGTCAGCTCAGGTAGCACGCCTTGGTCTTACTGGCTGCAGAACTTaGGGGTTTCCTCCTTGGAGA +
Preference number: 4 (lower is better)
Translates to: RNSSAFKKLSAQVARLGLTGCRT*GFPPWR
Trigger: TCTCCAAGGAGGAAACCCCCAAGTTCTGCAGCCAGT...AAGACCAAGGCGTGCTACCTGAGCTGACAGCTTTTTGAAAGCCGAGCTGTTTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp GTCTCTTCTAAAAATACAAAAGGAACCGAGTGTGGCGGCACATTGTTCTTTAAACACCCTCCAGTGGCGTaGTGGCTGTGCCTGGGGGCT +
Preference number: 4 (lower is better)
Translates to: VSSKNTKGTECGGTLFFKHPPVA*WLCLGA
Trigger: AGCCCCCAGGCACAGCCACCACGCCACTGGAGGGTG...TTTAAAGAACAATGTGCCGCCACACTCGGTTCCTTTTGTATTTTTAGAAGAGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000319921.4
CDS-3UTR CCA 90 bp GATGAGAAAGTTTCAGAACATGTATGTACATGGTTCAGAAACAGCTCGGCTTTCCTTCACCAGCAGAGGTaGGGGGACCGGTCCCCTCCT +
Preference number: 4 (lower is better)
Translates to: DEKVSEHVCTWFRNSSAFLHQQR*GDRSPP
Trigger: AGGAGGGGACCGGTCCCCCCACCTCTGCTGGTGAAG...GAAAGCCGAGCTGTTTCTGAACCATGTACATACATGTTCTGAAACTTTCTCATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp TTTCAGGCAGGGCATGGGGGACTCCTTCTGAGGCAGAGGTGTAAGCGTTTCAGTTTTAACTGCATTGGCTaGCTCAGCTACAGCATCAAC +
Preference number: 4 (lower is better)
Translates to: FQAGHGGLLLRQRCKRFSFNCIG*LSYSIN
Trigger: GTTGATGCTGTAGCTGAGCCAGCCAATGCAGTTAAA...ACTGAAACGCTTACACCTCTGCCTCAGAAGGAGTCCCCCATGCCCTGCCTGAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR CCA 90 bp GCCAGCTCTGAGGTATCAAAGGAGCTCCGAGTGCAAGTTGAAGACTTCAGCAAGAGGAGTGGTTGCTGGTaGCTGTTTCATTCTCTGGGT +
Preference number: 4 (lower is better)
Translates to: ASSEVSKELRVQVEDFSKRSGCW*LFHSLG
Trigger: ACCCAGAGAATGAAACAGCCACCAGCAACCACTCCT...CTTGCTGAAGTCTTCAACTTGCACTCGGAGCTCCTTTGATACCTCAGAGCTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp GCCAGCTCTGAGGTATCAAAGGAGCTCCGAGTGCAAGTTGAAGACTTCAGCAAGAGGAGGAGTGGTTGCTaGTGGCTGTTTCATTCTCTG +
Preference number: 4 (lower is better)
Translates to: ASSEVSKELRVQVEDFSKRRSGC*WLFHSL
Trigger: CAGAGAATGAAACAGCCACCAGCAACCACTCCTCCT...CTTGCTGAAGTCTTCAACTTGCACTCGGAGCTCCTTTGATACCTCAGAGCTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp ATTGTTTATGCCTGCAGAGGGGAGTGGGTGACTAGAGGGGAGGAGGATGATGGCTTGGTCTCAGCTTCCTaGCAGTGTGTTTTGAAAGGA +
Preference number: 4 (lower is better)
Translates to: IVYACRGEWVTRGEEDDGLVSAS*QCVLKG
Trigger: TCCTTTCAAAACACACTGCCAGGAAGCTGAGACCAA...GCCATCATCCTCCTCCCCTCTAGTCACCCACTCCCCTCTGCAGGCATAAACAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000319921.4
CDS-3UTR CCA 90 bp TTTATGCGTGAGAAAACCAAGGCCCTGATGGTGTCCCTGGTCCAAGTCCAGTGCCTTGCCTTCACTTCCTaGACATCTGCTTCCTGGTTT +
Preference number: 4 (lower is better)
Translates to: FMREKTKALMVSLVQVQCLAFTS*TSASWF
Trigger: AAACCAGGAAGCAGATGTCCAGGAAGTGAAGGCAAG...GCACTGGACTTGGACCAGGGACACCATCAGGGCCTTGGTTTTCTCACGCATAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp CACGCCGCAGACGAGGAGAGAGGAGTCTTCTCTCCAAAGTCATCCAAAGATAGCCAAAACTGCTCGAACTaGGTGAAGAAGCTGTTCAGG +
Preference number: 4 (lower is better)
Translates to: HAADEERGVFSPKSSKDSQNCSN*VKKLFR
Trigger: CCTGAACAGCTTCTTCACCCAGTTCGAGCAGTTTTG...GCTATCTTTGGATGACTTTGGAGAGAAGACTCCTCTCTCCTCGTCTGCGGCGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp GCACGCCTTGGTCTTGAATTCGGTGCTACGCTGACAGCTCTCCTTCTGAATGCACAAAACTGCTCGAACTaGGTGAAGAAGCTGTTCAGG +
Preference number: 4 (lower is better)
Translates to: ARLGLEFGATLTALLLNAQNCSN*VKKLFR
Trigger: CCTGAACAGCTTCTTCACCCAGTTCGAGCAGTTTTG...TGCATTCAGAAGGAGAGCTGTCAGCGTAGCACCGAATTCAAGACCAAGGCGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp GCACGCCTTGGTCTTGAATTCGGTGCTACGCTGACAGCTCTCCTTCTGAATGCACAGTTTACTCCTCACTaGGCAGTCCACAGGCAAAAA +
Preference number: 4 (lower is better)
Translates to: ARLGLEFGATLTALLLNAQFTPH*AVHRQK
Trigger: TTTTTGCCTGTGGACTGCCCAGTGAGGAGTAAACTG...TGCATTCAGAAGGAGAGCTGTCAGCGTAGCACCGAATTCAAGACCAAGGCGTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp GCCAGCTCTGAGGTATCAAAGGAGCTCCGAGTGCAAGTTGAAGACTTCAGCAAGGCAGCAAGGGTCCCTTaGAAGACTGTTTGGACTGAA +
Preference number: 4 (lower is better)
Translates to: ASSEVSKELRVQVEDFSKAARVP*KTVWTE
Trigger: TTCAGTCCAAACAGTCTTCCAAGGGACCCTTGCTGC...CTTGCTGAAGTCTTCAACTTGCACTCGGAGCTCCTTTGATACCTCAGAGCTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp GCACGCCTTGGTCTTGAATTCGGTGCTACGCTGACAGCTCTCCTTCTGAATGCAATTTCTCGAAGGTCTTaGCCACACTGTCCTCTAAGC +
Preference number: 4 (lower is better)
Translates to: ARLGLEFGATLTALLLNAISRRS*PHCPLS
Trigger: GCTTAGAGGACAGTGTGGCCAAGACCTTCGAGAAAT...TGCATTCAGAAGGAGAGCTGTCAGCGTAGCACCGAATTCAAGACCAAGGCGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp AGGAGGATGATGGCTAAAGGGGCCGGGTTTCTCTTTGAAGTGATGAAAATGCTCGAGAGATTGTTCACCTaGCAGGCTGAGCTCACGGCT +
Preference number: 4 (lower is better)
Translates to: RRMMAKGAGFLFEVMKMLERLFT*QAELTA
Trigger: AGCCGTGAGCTCAGCCTGCCAGGTGAACAATCTCTC...GAGCATTTTCATCACTTCAAAGAGAAACCCGGCCCCTTTAGCCATCATCCTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319921.4
CDS-3UTR CCA 90 bp CTGGACTTCCCCTGTGGCCGCAAGGCTGTGCTTGTACAGGGGTTAAGTGTCCAAACTCTGGGTCCCATCTaGAAGACATCTCATTATGTA +
Preference number: 4 (lower is better)
Translates to: LDFPCGRKAVLVQGLSVQTLGPI*KTSHYV
Trigger: TACATAATGAGATGTCTTCCAGATGGGACCCAGAGT...TTGGACACTTAACCCCTGTACAAGCACAGCCTTGCGGCCACAGGGGAAGTCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319921.4
CDS-3UTR CCA 90 bp TCACAATTTCAAAATGTCAGATCAGAAGAATCTTTGGCGATTAATCCACTCTCCCAACCGAGGCCTCGTTaGCAGGCTCTCGGCCCCGGC +
Preference number: 4 (lower is better)
Translates to: SQFQNVRSEESLAINPLSQPRPR*QALGPG
Trigger: GCCGGGGCCGAGAGCCTGCCAACGAGGCCTCGGTTG...GGAGAGTGGATTAATCGCCAAAGATTCTTCTGATCTGACATTTTGAAATTGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp TCGGCTTTCAAAAAGCTGTCAGCTCAGGTAGCACGCCTTGGTCTTGAATTCGGTCGGCTGCAGCATGAATaGCCATTTCTGTCACCGTTC +
Preference number: 4 (lower is better)
Translates to: SAFKKLSAQVARLGLEFGRLQHE*PFLSPF
Trigger: GAACGGTGACAGAAATGGCCATTCATGCTGCAGCCG...ACCGAATTCAAGACCAAGGCGTGCTACCTGAGCTGACAGCTTTTTGAAAGCCGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp CACGCCGCAGACGAGGAGAGAGGAGTCTTCTCTCCAAAGTCATCCAAAGATAGCCAAATCTTAGAGCAATaGACCACACTTTTCCGGGGC +
Preference number: 4 (lower is better)
Translates to: HAADEERGVFSPKSSKDSQILEQ*TTLFRG
Trigger: GCCCCGGAAAAGTGTGGTCCATTGCTCTAAGATTTG...GCTATCTTTGGATGACTTTGGAGAGAAGACTCCTCTCTCCTCGTCTGCGGCGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp GGGGAGTCTAAAACCAGCTGTAACCAAGTGTCTGTGTACGGGAACTGGTGTGGGACTTGCTGGACGTTCTaGAACTGCTTCACTAGATCC +
Preference number: 4 (lower is better)
Translates to: GESKTSCNQVSVYGNWCGTCWTF*NCFTRS
Trigger: GGATCTAGTGAAGCAGTTCCAGAACGTCCAGCAAGT...CCCACACCAGTTCCCGTACACAGACACTTGGTTACAGCTGGTTTTAGACTCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR CCA 90 bp GGAATGCAGATCTCGGTGGCAGGTGGCTCTGCACAGTCCAGAGTGATAAAACAACCTGGTACTGGCAGTTaGAGAGAATCAGTGGAGTCA +
Preference number: 4 (lower is better)
Translates to: GMQISVAGGSAQSRVIKQPGTGS*RESVES
Trigger: TGACTCCACTGATTCTCTCCAACTGCCAGTACCAGG...TTGTTTTATCACTCTGGACTGTGCAGAGCCACCTGCCACCGAGATCTGCATTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp CAGATCTCGGTGGCAGGTGGCTCTGCACAGTCCAGAGTGATAAAACAATCACAGATTCAGCTGCATGTTTaGATCCCCACCAGCTGTGCT +
Preference number: 4 (lower is better)
Translates to: QISVAGGSAQSRVIKQSQIQLHV*IPTSCA
Trigger: AGCACAGCTGGTGGGGATCCAAACATGCAGCTGAAT...CTGTGATTGTTTTATCACTCTGGACTGTGCAGAGCCACCTGCCACCGAGATCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp TTTATGCGTGAGAAAACCAAGGCCCTGATGGTGTCCCTGGTCCAAGTCCAGTGCTCATTACTGCGTGTGTaGCTGAGCTACAAGTCTCCT +
Preference number: 4 (lower is better)
Translates to: FMREKTKALMVSLVQVQCSLLRV*LSYKSP
Trigger: AGGAGACTTGTAGCTCAGCCACACACGCAGTAATGA...GCACTGGACTTGGACCAGGGACACCATCAGGGCCTTGGTTTTCTCACGCATAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp GCCAGCTCTGAGGTATCAAAGGAGCTCCGAGTGCAAGTTGAAGACTTCAGCAAGTCTTTTGGCCACCTTTaGGCGCCTGGATCACATAGA +
Preference number: 4 (lower is better)
Translates to: ASSEVSKELRVQVEDFSKSFGHL*APGSHR
Trigger: TCTATGTGATCCAGGCGCCCAAAGGTGGCCAAAAGA...CTTGCTGAAGTCTTCAACTTGCACTCGGAGCTCCTTTGATACCTCAGAGCTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp ATCAAGTCCACGCCGCAGACGAGGAGAGAGGAGTCTTCTCTCCAAAGTCATCCAATTGAAGAAAACGTATaGGTGAGGCTCCGACTCCCA +
Preference number: 4 (lower is better)
Translates to: IKSTPQTRREESSLQSHPIEENV*VRLRLP
Trigger: TGGGAGTCGGAGCCTCACCCATACGTTTTCTTCAAT...TGGATGACTTTGGAGAGAAGACTCCTCTCTCCTCGTCTGCGGCGTGGACTTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp GCACGCCTTGGTCTTGAATTCGGTGCTACGCTGACAGCTCTCCTTCTGAATGCAATGTTGGGCTGCAGATaGAAGCCGATGAATGTCATG +
Preference number: 4 (lower is better)
Translates to: ARLGLEFGATLTALLLNAMLGCR*KPMNVM
Trigger: CATGACATTCATCGGCTTCCATCTGCAGCCCAACAT...TGCATTCAGAAGGAGAGCTGTCAGCGTAGCACCGAATTCAAGACCAAGGCGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp ACCACAGAAAGGACTAGATATTCATACATGCGAGAGCACACTGAGACTGCATGTTGGAGCAGCAGGCCCTaGTACAGGTCCCTGGTCATG +
Preference number: 4 (lower is better)
Translates to: TTERTRYSYMREHTETACWSSRP*YRSLVM
Trigger: CATGACCAGGGACCTGTACCAGGGCCTGCTGCTCCA...ACATGCAGTCTCAGTGTGCTCTCGCATGTATGAATATCTAGTCCTTTCTGTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp CACTGGTGGCACCATGACAGTGAGGAGAACGGAGCACAGTTCCTTCCGTGCCTCCAAGTTTCTTGTGTCTaGGCAGTTTATCAAAGTCGA +
Preference number: 4 (lower is better)
Translates to: HWWHHDSEENGAQFLPCLQVSCV*AVYQSR
Trigger: TCGACTTTGATAAACTGCCCAGACACAAGAAACTTG...GAGGCACGGAAGGAACTGTGCTCCGTTCTCCTCACTGTCATGGTGCCACCAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp GTTCTAGACCACAGGTTTCTCGCCTGGAAGAACCTTTCCTTTTTGGAAGAGAAATCCTGGAGAGCGTCCTaGTTGCAGGCTTCCCTTGCC +
Preference number: 4 (lower is better)
Translates to: VLDHRFLAWKNLSFLEEKSWRAS*LQASLA
Trigger: GGCAAGGGAAGCCTGCAACCAGGACGCTCTCCAGGA...TTTCTCTTCCAAAAAGGAAAGGTTCTTCCAGGCGAGAAACCTGTGGTCTAGAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR CCA 90 bp CAGATCTCGGTGGCAGGTGGCTCTGCACAGTCCAGAGTGATAAAACAATCACAGAAAATCCGACTCCACTaGGCTCTGACTTCCCTGATG +
Preference number: 4 (lower is better)
Translates to: QISVAGGSAQSRVIKQSQKIRLH*ALTSLM
Trigger: CATCAGGGAAGTCAGAGCCCAGTGGAGTCGGATTTT...CTGTGATTGTTTTATCACTCTGGACTGTGCAGAGCCACCTGCCACCGAGATCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp TGCACTTTCCTGGCGCTTGTTTTTCCAGCTGGAAACGGGATTCGTAATGGTAATTGCTTCCCCCTGCTTTaGCCCCAGGTTGCTTTCGCA +
Preference number: 4 (lower is better)
Translates to: CTFLALVFPAGNGIRNGNCFPLL*PQVAFA
Trigger: TGCGAAAGCAACCTGGGGCCAAAGCAGGGGGAAGCA...ATTACCATTACGAATCCCGTTTCCAGCTGGAAAAACAAGCGCCAGGAAAGTGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR CCA 90 bp AGAAACAGCTCGGCTTTCAAAAAGCTGTCAGCTCAGGTAGCACGCCTTGGTCTTATGGGGCAAAGATCGTaGGTTCTGAGGAAGTGGCTG +
Preference number: 4 (lower is better)
Translates to: RNSSAFKKLSAQVARLGLMGQRS*VLRKWL
Trigger: CAGCCACTTCCTCAGAACCCACGATCTTTGCCCCAT...AAGACCAAGGCGTGCTACCTGAGCTGACAGCTTTTTGAAAGCCGAGCTGTTTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR CCA 90 bp TCGGCTTTCAAAAAGCTGTCAGCTCAGGTAGCACGCCTTGGTCTTGAATTCGGTATTAGGAGTCACTCATaGACCTGTGGCGATGGGGCA +
Preference number: 4 (lower is better)
Translates to: SAFKKLSAQVARLGLEFGIRSHS*TCGDGA
Trigger: TGCCCCATCGCCACAGGTCCATGAGTGACTCCTAAT...ACCGAATTCAAGACCAAGGCGTGCTACCTGAGCTGACAGCTTTTTGAAAGCCGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000582970.5
3UTR CAA 72 bp TCAGCTCCACTGTGGAGTCGCCAGGATGCTGTCATTTaGTCCAGAGGAAAAGTCCACCGTCTCACATGTGAA +
Preference number: 4 (lower is better)
Translates to: SAPLWSRQDAVI*SRGKVHRLTCE
Trigger: TTCACATGTGAGACGGTGGACTTTTCCTCTGGACAAAATGACAGCATCCTGGCGACTCCACAGTGGAGCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582970.5
3UTR CAA 72 bp GGTACCCTGGCTTACAGGTTACCTTGTGCCATACCTTaGAAACAAGGGACCTGTCCAGGCTTCACTCTGATG +
Preference number: 4 (lower is better)
Translates to: GTLAYRLPCAIP*KQGTCPGFTLM
Trigger: CATCAGAGTGAAGCCTGGACAGGTCCCTTGTTTCAAAGGTATGGCACAAGGTAACCTGTAAGCCAGGGTACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR TCA 90 bp AGAAACAGCTCGGCTTTCAAAAAGCTGTCAGCTCAGGTAGCACGCCTTGGTCTTACATGTCCTGTCACGTaGCCACGGCTTCAGTTTCAT +
Preference number: 4 (lower is better)
Translates to: RNSSAFKKLSAQVARLGLTCPVT*PRLQFH
Trigger: ATGAAACTGAAGCCGTGGTCACGTGACAGGACATGT...AAGACCAAGGCGTGCTACCTGAGCTGACAGCTTTTTGAAAGCCGAGCTGTTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp GAGTCCTGGACAAGCATTTTGTATTTTTGTAGTTCTCACTCCTTAGGCCCAATTCGTGGAAGAACACGGTaGCTCCTCCACCCGGGCTCA +
Preference number: 4 (lower is better)
Translates to: ESWTSILYFCSSHSLGPIRGRTR*LLHPGS
Trigger: TGAGCCCGGGTGGAGGAGTCACCGTGTTCTTCCACG...AATTGGGCCTAAGGAGTGAGAACTACAAAAATACAAAATGCTTGTCCAGGACTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp ATCAAGTCCACGCCGCAGACGAGGAGAGAGGAGTCTTCTCTCCAAAGTCATCCAATTGCTGTCCCATTTTaGCTCCCCAAATTCTTCTCC +
Preference number: 4 (lower is better)
Translates to: IKSTPQTRREESSLQSHPIAVPF*LPKFFS
Trigger: GGAGAAGAATTTGGGGAGTCAAAATGGGACAGCAAT...TGGATGACTTTGGAGAGAAGACTCCTCTCTCCTCGTCTGCGGCGTGGACTTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp ACCACAGAAAGGACTAGATATTCATACATGCGAGAGCACACTGAGACTGCATGTTTGTTCCCGGAACGGTaGGAAGGAGAGTCCCTCCAG +
Preference number: 4 (lower is better)
Translates to: TTERTRYSYMREHTETACLFPER*EGESLQ
Trigger: CTGGAGGGACTCTCCTTCTCACCGTTCCGGGAACAA...ACATGCAGTCTCAGTGTGCTCTCGCATGTATGAATATCTAGTCCTTTCTGTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp GGAATGCAGATCTCGGTGGCAGGTGGCTCTGCACAGTCCAGAGTGATAAAACAAAGCTCACGGCTTCAATaGTGCATTTCTCGAAGGTCT +
Preference number: 4 (lower is better)
Translates to: GMQISVAGGSAQSRVIKQSSRLQ*CISRRS
Trigger: AGACCTTCGAGAAATGCATCATTGAAGCCGTGAGCT...TTGTTTTATCACTCTGGACTGTGCAGAGCCACCTGCCACCGAGATCTGCATTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp ATCAAGTCCACGCCGCAGACGAGGAGAGAGGAGTCTTCTCTCCAAAGTCATCCATCTTGCATTCGCCAATaGATTTGCTCACAGCTTCAC +
Preference number: 4 (lower is better)
Translates to: IKSTPQTRREESSLQSHPSCIRQ*ICSQLH
Trigger: GTGAAGCTGTGAGCAAATTCATTGGCGAATGCAAGA...TGGATGACTTTGGAGAGAAGACTCCTCTCTCCTCGTCTGCGGCGTGGACTTGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp ACCACAGAAAGGACTAGATATTCATACATGCGAGAGCACACTGAGACTGCATGTTTCCACCTCCGAGCTTaGGCCAGCAAGTCTTCAGGC +
Preference number: 4 (lower is better)
Translates to: TTERTRYSYMREHTETACFHLRA*ASKSSG
Trigger: GCCTGAAGACTTGCTGGCTCAAGCTCGGAGGTGGAA...ACATGCAGTCTCAGTGTGCTCTCGCATGTATGAATATCTAGTCCTTTCTGTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp CAGATCTCGGTGGCAGGTGGCTCTGCACAGTCCAGAGTGATAAAACAATCACAGAGTCTTTGGGTAGGTTaGTCTCACCGTTCGTCTCAA +
Preference number: 4 (lower is better)
Translates to: QISVAGGSAQSRVIKQSQSLWVG*SHRSSQ
Trigger: TTGAGACGAACGGTGAGATCAACCTACCCAAAGACT...CTGTGATTGTTTTATCACTCTGGACTGTGCAGAGCCACCTGCCACCGAGATCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp AGGACTAGATATTCATACATGCGAGAGCACACTGAGACTGCATGTTTATTTGGCGGCAGTGGCTCACTGTaGGGGGAGAGGGTCAGATCT +
Preference number: 4 (lower is better)
Translates to: RTRYSYMREHTETACLFGGSGSL*GERVRS
Trigger: AGATCTGACCCTCTCCCCTCACAGTGAGCCACTGCC...GCCAAATAAACATGCAGTCTCAGTGTGCTCTCGCATGTATGAATATCTAGTCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp GAGTCCTGGACAAGCATTTTGTATTTTTGTAGTTCTCACTCCTTAGGCCCAATTGTCATTCTCCCCCGCTaGGATGGAGGCCAGGTCCAC +
Preference number: 4 (lower is better)
Translates to: ESWTSILYFCSSHSLGPIVILPR*DGGQVH
Trigger: GTGGACCTGGCCTCCATCTCAGCGGGGGAGAATGAC...AATTGGGCCTAAGGAGTGAGAACTACAAAAATACAAAATGCTTGTCCAGGACTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp TCGGCTTTCAAAAAGCTGTCAGCTCAGGTAGCACGCCTTGGTCTTGAATTCGGTGTCAGAGGTGTGGAGTaGTGGTGTGGCAAAATCTCT +
Preference number: 4 (lower is better)
Translates to: SAFKKLSAQVARLGLEFGVRGVE*WCGKIS
Trigger: AGAGATTTTGCCACACCATCACTCCACACCTCTGAC...ACCGAATTCAAGACCAAGGCGTGCTACCTGAGCTGACAGCTTTTTGAAAGCCGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp CACGCCGCAGACGAGGAGAGAGGAGTCTTCTCTCCAAAGTCATCCAAAGATAGCTTGTGTGGTCGTCATTaGAGAAAACGTATGGGTGAG +
Preference number: 4 (lower is better)
Translates to: HAADEERGVFSPKSSKDSLCGRH*RKRMGE
Trigger: CTCACCCATACGTTTTCTTCAATGACGACCACACAA...GCTATCTTTGGATGACTTTGGAGAGAAGACTCCTCTCTCCTCGTCTGCGGCGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp TCGGCTTTCAAAAAGCTGTCAGCTCAGGTAGCACGCCTTGGTCTTGAATTCGGTCGGTGTGATTTTTGCTaGCGCTGGACTTGGAGAGAA +
Preference number: 4 (lower is better)
Translates to: SAFKKLSAQVARLGLEFGRCDFC*RWTWRE
Trigger: TTCTCTCCAAGTCCAGCGTCAGCAAAAATCACACCG...ACCGAATTCAAGACCAAGGCGTGCTACCTGAGCTGACAGCTTTTTGAAAGCCGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp AGGACTAGATATTCATACATGCGAGAGCACACTGAGACTGCATGTTTATTTGGCCTGGACGAGGATGTCTaGGGAGCAGATGCCCTTGGC +
Preference number: 4 (lower is better)
Translates to: RTRYSYMREHTETACLFGLDEDV*GADALG
Trigger: GCCAAGGGCATCTGCTCCTCAGACATCCTCGTCCAG...GCCAAATAAACATGCAGTCTCAGTGTGCTCTCGCATGTATGAATATCTAGTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp TCGGCTTTCAAAAAGCTGTCAGCTCAGGTAGCACGCCTTGGTCTTGAATTCGGTTGCCGTCTCTGTCGATaGATGATATCATGCTCGCCA +
Preference number: 4 (lower is better)
Translates to: SAFKKLSAQVARLGLEFGCRLCR*MISCSP
Trigger: TGGCGAGCATGATATCATTCATCGACAGAGACGGCA...ACCGAATTCAAGACCAAGGCGTGCTACCTGAGCTGACAGCTTTTTGAAAGCCGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp ACTGCGTGTGTGGCTGAGCTACAAGTCTCCTGGAATGTAAACAATGTTGGTTTACTGCTGGGACTGCCCTaGAGATCCAGAAGCAAGAGC +
Preference number: 4 (lower is better)
Translates to: TACVAELQVSWNVNNVGLLLGLP*RSRSKS
Trigger: GCTCTTGCTTCTGGATCTGCAGGGCAGTCCCAGCAG...TAAACCAACATTGTTTACATTCCAGGAGACTTGTAGCTCAGCCACACACGCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp AGGACTAGATATTCATACATGCGAGAGCACACTGAGACTGCATGTTTATTTGGCGGGTCCTGCTGGGACTaGCCTGCAGATCCAGAAGCA +
Preference number: 4 (lower is better)
Translates to: RTRYSYMREHTETACLFGGSCWD*PADPEA
Trigger: TGCTTCTGGATCTGCAGGGCAGTCCCAGCAGGACCC...GCCAAATAAACATGCAGTCTCAGTGTGCTCTCGCATGTATGAATATCTAGTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp TTCCAAAGACCAGTCTTACCAAGTTTCAGATGTCTGGACTCCAAGTGGCAGTTCTCTCTCCGCACTGGCTaGAGAACTTGGGGGTTTCCT +
Preference number: 4 (lower is better)
Translates to: FQRPVLPSFRCLDSKWQFSLRTG*RTWGFP
Trigger: AGGAAACCCCCAAGTTCTGCAGCCAGTGCGGAGAGA...GAACTGCCACTTGGAGTCCAGACATCTGAAACTTGGTAAGACTGGTCTTTGGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR GCA 90 bp TCGGCTTTCAAAAAGCTGTCAGCTCAGGTAGCACGCCTTGGTCTTGAATTCGGTATTGTTCTCAGAATCTaGTATGGGGGCTGCAGGAGG +
Preference number: 4 (lower is better)
Translates to: SAFKKLSAQVARLGLEFGIVLRI*YGGCRR
Trigger: CCTCCTGCAGCCCCCATAGCAGATTCTGAGAACAAT...ACCGAATTCAAGACCAAGGCGTGCTACCTGAGCTGACAGCTTTTTGAAAGCCGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp CAATTTCAAAATGTCAGATCAGAAGAATCTTTGGCGATTAATCCACTCTCCATTGTGGCGTGGTGGCTGTaGCTGGGGGCTGGCTCGGCT +
Preference number: 4 (lower is better)
Translates to: QFQNVRSEESLAINPLSIVAWWL*LGAGSA
Trigger: AGCCGAGCCAGCCCCCAGGCACAGCCACCACGCCAC...AATGGAGAGTGGATTAATCGCCAAAGATTCTTCTGATCTGACATTTTGAAATTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp TCACAATTTCAAAATGTCAGATCAGAAGAATCTTTGGCGATTAATCCACTCTCCCCCAAAGCCTGGGCCTaGAGGGGGCTGTCGCCAACC +
Preference number: 4 (lower is better)
Translates to: SQFQNVRSEESLAINPLSPKAWA*RGLSPT
Trigger: GGTTGGCGACAGCCCCCTGCAGGCCCAGGCTTTGGG...GGAGAGTGGATTAATCGCCAAAGATTCTTCTGATCTGACATTTTGAAATTGTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp GGAATGCAGATCTCGGTGGCAGGTGGCTCTGCACAGTCCAGAGTGATAAAACAAGCAGCTCACAGATATTaGTGTCCCATTTTGACTCCC +
Preference number: 4 (lower is better)
Translates to: GMQISVAGGSAQSRVIKQAAHRY*CPILTP
Trigger: GGGAGTCAAAATGGGACAGCAATATCTGTGAGCTGC...TTGTTTTATCACTCTGGACTGTGCAGAGCCACCTGCCACCGAGATCTGCATTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp ATTGTTTATGCCTGCAGAGGGGAGTGGGTGACTAGAGGGGAGGAGGATGATGGCACAACCAGTCCAGGCTaGCTTCTAATAAAAGCTCAA +
Preference number: 4 (lower is better)
Translates to: IVYACRGEWVTRGEEDDGTTSPG*LLIKAQ
Trigger: TTGAGCTTTTATTAGAAGGCAGCCTGGACTGGTTGT...GCCATCATCCTCCTCCCCTCTAGTCACCCACTCCCCTCTGCAGGCATAAACAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000319921.4
CDS-3UTR GCA 90 bp TGCTGGCCAGTCTATCTTACACAAAGTTTTAAGTTTTCCTGGTGTCATAGTACTGGCTTGGAGAGGCCCTaGACGAACTCCATCCCCCGC +
Preference number: 4 (lower is better)
Translates to: CWPVYLTQSFKFSWCHSTGLERP*TNSIPR
Trigger: GCGGGGGATGGAGTTCGTGCAGGGCCTCTCCAAGCC...AGTACTATGACACCAGGAAAACTTAAAACTTTGTGTAAGATAGACTGGCCAGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR GCA 90 bp TCGGCTTTCAAAAAGCTGTCAGCTCAGGTAGCACGCCTTGGTCTTGAATTCGGTGGTCTGCGTTCTGTCTaGCTTGTCTTTGACCAGATG +
Preference number: 4 (lower is better)
Translates to: SAFKKLSAQVARLGLEFGGLRSV*LVFDQM
Trigger: CATCTGGTCAAAGACAAGGCAGACAGAACGCAGACC...ACCGAATTCAAGACCAAGGCGTGCTACCTGAGCTGACAGCTTTTTGAAAGCCGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp GGAATGCAGATCTCGGTGGCAGGTGGCTCTGCACAGTCCAGAGTGATAAAACAATCCTTCAGGATGTGCTaGTGCAGAAAGCCTTTTGGA +
Preference number: 4 (lower is better)
Translates to: GMQISVAGGSAQSRVIKQSFRMC*CRKPFG
Trigger: TCCAAAAGGCTTTCTGCAGCAGCACATCCTGAAGGA...TTGTTTTATCACTCTGGACTGTGCAGAGCCACCTGCCACCGAGATCTGCATTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp ACTGCGTGTGTGGCTGAGCTACAAGTCTCCTGGAATGTAAACAATGTTGGTTTACTAGAGAGCTGGTGCTaGTCTTGGAGAAGCCTGCGC +
Preference number: 4 (lower is better)
Translates to: TACVAELQVSWNVNNVGLLESWC*SWRSLR
Trigger: GCGCAGGCTTCTCCAAGAGCAGCACCAGCTCTCTAG...TAAACCAACATTGTTTACATTCCAGGAGACTTGTAGCTCAGCCACACACGCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp AGAAACAGCTCGGCTTTCAAAAAGCTGTCAGCTCAGGTAGCACGCCTTGGTCTTTCCTTCTGCAGGAAATaGCAGAGGATGGGCACTCTT +
Preference number: 4 (lower is better)
Translates to: RNSSAFKKLSAQVARLGLSFCRK*QRMGTL
Trigger: AAGAGTGCCCATCCTCTGGCATTTCCTGCAGAAGGA...AAGACCAAGGCGTGCTACCTGAGCTGACAGCTTTTTGAAAGCCGAGCTGTTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp GCCAGCTCTGAGGTATCAAAGGAGCTCCGAGTGCAAGTTGAAGACTTCAGCAAGGATCCAAGTCAGTGCTaGAGTAGTCTTTGGGTAGGT +
Preference number: 4 (lower is better)
Translates to: ASSEVSKELRVQVEDFSKDPSQC*SSLWVG
Trigger: ACCTACCCAAAGACTACTGCAGCACTGACTTGGATC...CTTGCTGAAGTCTTCAACTTGCACTCGGAGCTCCTTTGATACCTCAGAGCTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp GCCAGCTCTGAGGTATCAAAGGAGCTCCGAGTGCAAGTTGAAGACTTCAGCAAGCCAGATCCAAGTCAGTaGTGCAGTAGTCTTTGGGTA +
Preference number: 4 (lower is better)
Translates to: ASSEVSKELRVQVEDFSKPDPSQ*CSSLWV
Trigger: TACCCAAAGACTACTGCAGCACTGACTTGGATCTGG...CTTGCTGAAGTCTTCAACTTGCACTCGGAGCTCCTTTGATACCTCAGAGCTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp TCAAGTCCACGCCGCAGACGAGGAGAGAGGAGTCTTCTCTCCAAAGTCATCCAAGTATACACATTCAGCTaGATGTTTGGATCCCCACCA +
Preference number: 4 (lower is better)
Translates to: SSPRRRRGERSLLSKVIQVYTFS*MFGSPP
Trigger: TGGTGGGGATCCAAACATGCAGCTGAATGTGTATAC...TTGGATGACTTTGGAGAGAAGACTCCTCTCTCCTCGTCTGCGGCGTGGACTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp ATCAAGTCCACGCCGCAGACGAGGAGAGAGGAGTCTTCTCTCCAAAGTCATCCATCACAGATGACTAAATaGCAGGGACTGTGTGAAGTC +
Preference number: 4 (lower is better)
Translates to: IKSTPQTRREESSLQSHPSQMTK*QGLCEV
Trigger: GACTTCACACAGTCCCTGGCATTTAGTCATCTGTGA...TGGATGACTTTGGAGAGAAGACTCCTCTCTCCTCGTCTGCGGCGTGGACTTGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp ACTGCGTGTGTGGCTGAGCTACAAGTCTCCTGGAATGTAAACAATGTTGGTTTAAGTCTGGGTGTGAGCTaGCACCTGACAGCCAGCTCT +
Preference number: 4 (lower is better)
Translates to: TACVAELQVSWNVNNVGLSLGVS*HLTASS
Trigger: AGAGCTGGCTGTCAGGTGGCAGCTCACACCCAGACT...TAAACCAACATTGTTTACATTCCAGGAGACTTGTAGCTCAGCCACACACGCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp GATGAGAAAGTTTCAGAACATGTATGTACATGGTTCAGAAACAGCTCGGCTTTCGCTCTGCTCACAGTCTaGAGAAGGCACGCTGGCGGC +
Preference number: 4 (lower is better)
Translates to: DEKVSEHVCTWFRNSSAFALLTV*RRHAGG
Trigger: GCCGCCAGCGTGCCTTCTGCAGACTGTGAGCAGAGC...GAAAGCCGAGCTGTTTCTGAACCATGTACATACATGTTCTGAAACTTTCTCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508628.6
CDS-3UTR GCA 90 bp GCACGCCTTGGTCTTGAATTCGGTGCTACGCTGACAGCTCTCCTTCTGAATGCACAGCAGACAAGACGATaGCAAATTTCCGCAAATCAG +
Preference number: 4 (lower is better)
Translates to: ARLGLEFGATLTALLLNAQQTRR*QISANQ
Trigger: CTGATTTGCGGAAATTTGGCATCGTCTTGTCTGCTG...TGCATTCAGAAGGAGAGCTGTCAGCGTAGCACCGAATTCAAGACCAAGGCGTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp CAGATCTCGGTGGCAGGTGGCTCTGCACAGTCCAGAGTGATAAAACAATCACAGCACAATCTGAAGACGTaGTTGACATCTGCCAACGTG +
Preference number: 4 (lower is better)
Translates to: QISVAGGSAQSRVIKQSQHNLKT*LTSANV
Trigger: CACGTTGGCAGATGTCAAGCACGTCTTCAGATTGTG...CTGTGATTGTTTTATCACTCTGGACTGTGCAGAGCCACCTGCCACCGAGATCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp GCCAGCTCTGAGGTATCAAAGGAGCTCCGAGTGCAAGTTGAAGACTTCAGCAAGCACAATCTGAAGACGTaGTTGACATCTGCCAACGTG +
Preference number: 4 (lower is better)
Translates to: ASSEVSKELRVQVEDFSKHNLKT*LTSANV
Trigger: CACGTTGGCAGATGTCAAGCACGTCTTCAGATTGTG...CTTGCTGAAGTCTTCAACTTGCACTCGGAGCTCCTTTGATACCTCAGAGCTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp TCAAGTCCACGCCGCAGACGAGGAGAGAGGAGTCTTCTCTCCAAAGTCATCCAAGTCCAACTAAAATCGTaGCACTTAGGAGGTCACCAA +
Preference number: 4 (lower is better)
Translates to: SSPRRRRGERSLLSKVIQVQLKS*HLGGHQ
Trigger: TTGGTGACCTCCTAAGTGGCACGATTTTAGTTGGAC...TTGGATGACTTTGGAGAGAAGACTCCTCTCTCCTCGTCTGCGGCGTGGACTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp GATGAGAAAGTTTCAGAACATGTATGTACATGGTTCAGAAACAGCTCGGCTTTCCTCACTCAGCGGCTCTaGGGCTTCCCGCCAGAAGAG +
Preference number: 4 (lower is better)
Translates to: DEKVSEHVCTWFRNSSAFLTQRL*GFPPEE
Trigger: CTCTTCTGGCGGGAAGCCGCAGAGCCGCTGAGTGAG...GAAAGCCGAGCTGTTTCTGAACCATGTACATACATGTTCTGAAACTTTCTCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp AGGACTAGATATTCATACATGCGAGAGCACACTGAGACTGCATGTTTATTTGGCAGGTGGTTGCCGGGGTaGAGAGCAGCACCTCATCGT +
Preference number: 4 (lower is better)
Translates to: RTRYSYMREHTETACLFGRWLPG*RAAPHR
Trigger: ACGATGAGGTGCTGCTCTGCACCCCGGCAACCACCT...GCCAAATAAACATGCAGTCTCAGTGTGCTCTCGCATGTATGAATATCTAGTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp CACGCCGCAGACGAGGAGAGAGGAGTCTTCTCTCCAAAGTCATCCAAAGATAGCTTTGGAAAGTTTCGCTaGAGAACTCCCACAGATCCA +
Preference number: 4 (lower is better)
Translates to: HAADEERGVFSPKSSKDSFGKFR*RTPTDP
Trigger: TGGATCTGTGGGAGTTCTGCAGCGAAACTTTCCAAA...GCTATCTTTGGATGACTTTGGAGAGAAGACTCCTCTCTCCTCGTCTGCGGCGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp ACTGCGTGTGTGGCTGAGCTACAAGTCTCCTGGAATGTAAACAATGTTGGTTTAGGCATTCCTCCGGGGTaGCTTCGACAGAGCCTTCTT +
Preference number: 4 (lower is better)
Translates to: TACVAELQVSWNVNNVGLGIPPG*LRQSLL
Trigger: AAGAAGGCTCTGTCGAAGGCACCCCGGAGGAATGCC...TAAACCAACATTGTTTACATTCCAGGAGACTTGTAGCTCAGCCACACACGCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp GCCAGCTCTGAGGTATCAAAGGAGCTCCGAGTGCAAGTTGAAGACTTCAGCAAGATCATCTCCTCAGAGTaGTTCCGGTATGGATTGCAG +
Preference number: 4 (lower is better)
Translates to: ASSEVSKELRVQVEDFSKIISSE*FRYGLQ
Trigger: CTGCAATCCATACCGGAAGCACTCTGAGGAGATGAT...CTTGCTGAAGTCTTCAACTTGCACTCGGAGCTCCTTTGATACCTCAGAGCTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp GTTCTAGACCACAGGTTTCTCGCCTGGAAGAACCTTTCCTTTTTGGAAGAGAAAACCCGGTATACCAGCTaGCTCAGAGGAATGGAGCCC +
Preference number: 4 (lower is better)
Translates to: VLDHRFLAWKNLSFLEEKTRYTS*LRGMEP
Trigger: GGGCTCCATTCCTCTGAGGCAGCTGGTATACCGGGT...TTTCTCTTCCAAAAAGGAAAGGTTCTTCCAGGCGAGAAACCTGTGGTCTAGAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR GCA 90 bp GCCAGCTCTGAGGTATCAAAGGAGCTCCGAGTGCAAGTTGAAGACTTCAGCAAGGCCTGTGCAATGTCTTaGGGGGAAGGCTTTCTATTT +
Preference number: 4 (lower is better)
Translates to: ASSEVSKELRVQVEDFSKACAMS*GEGFLF
Trigger: AAATAGAAAGCCTTCCCCGCAAGACATTGCACAGGC...CTTGCTGAAGTCTTCAACTTGCACTCGGAGCTCCTTTGATACCTCAGAGCTGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp TTCCAAAGACCAGTCTTACCAAGTTTCAGATGTCTGGACTCCAAGTGGCAGTTCCCCTCGAAGAATGTCTaGTGCAGGATCTGCAGTGCC +
Preference number: 4 (lower is better)
Translates to: FQRPVLPSFRCLDSKWQFPSKNV*CRICSA
Trigger: GGCACTGCAGATCCTGCAGCAGACATTCTTCGAGGG...GAACTGCCACTTGGAGTCCAGACATCTGAAACTTGGTAAGACTGGTCTTTGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR GCA 90 bp ACCACAGAAAGGACTAGATATTCATACATGCGAGAGCACACTGAGACTGCATGTTGCCTCTCTATGACCTaGAGCACCACAGACGCGCAG +
Preference number: 4 (lower is better)
Translates to: TTERTRYSYMREHTETACCLSMT*STTDAQ
Trigger: CTGCGCGTCTGTGGTGCTGCAGGTCATAGAGAGGCA...ACATGCAGTCTCAGTGTGCTCTCGCATGTATGAATATCTAGTCCTTTCTGTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp AGAAACAGCTCGGCTTTCAAAAAGCTGTCAGCTCAGGTAGCACGCCTTGGTCTTTGCCGTGTGCAGGTGTaGCTGAAGGAAATCTGCAAA +
Preference number: 4 (lower is better)
Translates to: RNSSAFKKLSAQVARLGLCRVQV*LKEICK
Trigger: TTTGCAGATTTCCTTCAGGCACACCTGCACACGGCA...AAGACCAAGGCGTGCTACCTGAGCTGACAGCTTTTTGAAAGCCGAGCTGTTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp ACCACAGAAAGGACTAGATATTCATACATGCGAGAGCACACTGAGACTGCATGTGTTGCAGGCTTCCCTTaGCAACCACTCCAGAGGGTG +
Preference number: 4 (lower is better)
Translates to: TTERTRYSYMREHTETACVAGFP*QPLQRV
Trigger: CACCCTCTGGAGTGGTTGGCAAGGGAAGCCTGCAAC...ACATGCAGTCTCAGTGTGCTCTCGCATGTATGAATATCTAGTCCTTTCTGTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp TTCCAAAGACCAGTCTTACCAAGTTTCAGATGTCTGGACTCCAAGTGGCAGTTCGCTGGGCAAGAAACCTaGCCAGAGGAGTCTGCTGAA +
Preference number: 4 (lower is better)
Translates to: FQRPVLPSFRCLDSKWQFAGQET*PEESAE
Trigger: TTCAGCAGACTCCTCTGGGCAGGTTTCTTGCCCAGC...GAACTGCCACTTGGAGTCCAGACATCTGAAACTTGGTAAGACTGGTCTTTGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR GCA 90 bp TTTATGCGTGAGAAAACCAAGGCCCTGATGGTGTCCCTGGTCCAAGTCCAGTGCGACCACAGAGCCATCTaGAGAAACTTTAATTCCTCC +
Preference number: 4 (lower is better)
Translates to: FMREKTKALMVSLVQVQCDHRAI*RNFNSS
Trigger: GGAGGAATTAAAGTTTCTGCAGATGGCTCTGTGGTC...GCACTGGACTTGGACCAGGGACACCATCAGGGCCTTGGTTTTCTCACGCATAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp TCAAGTCCACGCCGCAGACGAGGAGAGAGGAGTCTTCTCTCCAAAGTCATCCAAATTCTGGAAAAGTTCTaGAGACGGCTTCTGAAACGC +
Preference number: 4 (lower is better)
Translates to: SSPRRRRGERSLLSKVIQILEKF*RRLLKR
Trigger: GCGTTTCAGAAGCCGTCTGCAGAACTTTTCCAGAAT...TTGGATGACTTTGGAGAGAAGACTCCTCTCTCCTCGTCTGCGGCGTGGACTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp AGAAACAGCTCGGCTTTCAAAAAGCTGTCAGCTCAGGTAGCACGCCTTGGTCTTCATGCCTCCTCTTCTTaGTGTGGTTCTAGACCACAG +
Preference number: 4 (lower is better)
Translates to: RNSSAFKKLSAQVARLGLHASSS*CGSRPQ
Trigger: CTGTGGTCTAGAACCACAGCAAGAAGAGGAGGCATG...AAGACCAAGGCGTGCTACCTGAGCTGACAGCTTTTTGAAAGCCGAGCTGTTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR CCA 90 bp ATCAAGTCCACGCCGCAGACGAGGAGAGAGGAGTCTTCTCTCCAAAGTCATCCAAGGCCGACGCCATTGTaGAGTTATTGTTCTCAGAAT +
Preference number: 4 (lower is better)
Translates to: IKSTPQTRREESSLQSHPRPTPL*SYCSQN
Trigger: ATTCTGAGAACAATAACTCCACAATGGCGTCGGCCT...TGGATGACTTTGGAGAGAAGACTCCTCTCTCCTCGTCTGCGGCGTGGACTTGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp AGGACTAGATATTCATACATGCGAGAGCACACTGAGACTGCATGTTTATTTGGCTCCTCCCCTTCCGTGTaGTCCTGGAATTGCGGGCTG +
Preference number: 4 (lower is better)
Translates to: RTRYSYMREHTETACLFGSSPSV*SWNCGL
Trigger: CAGCCCGCAATTCCAGGACCACACGGAAGGGGAGGA...GCCAAATAAACATGCAGTCTCAGTGTGCTCTCGCATGTATGAATATCTAGTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp AGAAACAGCTCGGCTTTCAAAAAGCTGTCAGCTCAGGTAGCACGCCTTGGTCTTTCTTCAGTCCTAGAATaGCCTTCACCAGCAGAGGTG +
Preference number: 4 (lower is better)
Translates to: RNSSAFKKLSAQVARLGLSSVLE*PSPAEV
Trigger: CACCTCTGCTGGTGAAGGCCATTCTAGGACTGAAGA...AAGACCAAGGCGTGCTACCTGAGCTGACAGCTTTTTGAAAGCCGAGCTGTTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp TCGGCTTTCAAAAAGCTGTCAGCTCAGGTAGCACGCCTTGGTCTTGAATTCGGTCATGACCCAAGTCTCTaGTGTAGTGCAGCTCACAGA +
Preference number: 4 (lower is better)
Translates to: SAFKKLSAQVARLGLEFGHDPSL*CSAAHR
Trigger: TCTGTGAGCTGCACTACACCAGAGACTTGGGTCATG...ACCGAATTCAAGACCAAGGCGTGCTACCTGAGCTGACAGCTTTTTGAAAGCCGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp AGAAACAGCTCGGCTTTCAAAAAGCTGTCAGCTCAGGTAGCACGCCTTGGTCTTACTCATCTGGTGAGCTaGCATCTGAGGTTAGGAGGT +
Preference number: 4 (lower is better)
Translates to: RNSSAFKKLSAQVARLGLTHLVS*HLRLGG
Trigger: ACCTCCTAACCTCAGATGCCAGCTCACCAGATGAGT...AAGACCAAGGCGTGCTACCTGAGCTGACAGCTTTTTGAAAGCCGAGCTGTTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp GCCAGCTCTGAGGTATCAAAGGAGCTCCGAGTGCAAGTTGAAGACTTCAGCAAGTTGTGCTGCTGCAGATaGCTTCATGCAGTTTCAGAC +
Preference number: 4 (lower is better)
Translates to: ASSEVSKELRVQVEDFSKLCCCR*LHAVSD
Trigger: GTCTGAAACTGCATGAAGCCATCTGCAGCAGCACAA...CTTGCTGAAGTCTTCAACTTGCACTCGGAGCTCCTTTGATACCTCAGAGCTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp TCGGCTTTCAAAAAGCTGTCAGCTCAGGTAGCACGCCTTGGTCTTGAATTCGGTGCAGCAAGGGTCCCTTaGAAGACTGTTTGGACTGAA +
Preference number: 4 (lower is better)
Translates to: SAFKKLSAQVARLGLEFGAARVP*KTVWTE
Trigger: TTCAGTCCAAACAGTCTTCCAAGGGACCCTTGCTGC...ACCGAATTCAAGACCAAGGCGTGCTACCTGAGCTGACAGCTTTTTGAAAGCCGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp ATTGTTTATGCCTGCAGAGGGGAGTGGGTGACTAGAGGGGAGGAGGATGATGGCCCGTCAATGGACACATaGATAAACGGGGAATATTTG +
Preference number: 4 (lower is better)
Translates to: IVYACRGEWVTRGEEDDGPSMDT*INGEYL
Trigger: CAAATATTCCCCGTTTATCCATGTGTCCATTGACGG...GCCATCATCCTCCTCCCCTCTAGTCACCCACTCCCCTCTGCAGGCATAAACAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000319921.4
CDS-3UTR CCA 90 bp CACTGGTGGCACCATGACAGTGAGGAGAACGGAGCACAGTTCCTTCCGTGCCTCTTCTGGAGTAAGCACTaGTCTTCTCAAGTATTGAAT +
Preference number: 4 (lower is better)
Translates to: HWWHHDSEENGAQFLPCLFWSKH*SSQVLN
Trigger: ATTCAATACTTGAGAAGACCAGTGCTTACTCCAGAA...GAGGCACGGAAGGAACTGTGCTCCGTTCTCCTCACTGTCATGGTGCCACCAGTG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp TCAAGTCCACGCCGCAGACGAGGAGAGAGGAGTCTTCTCTCCAAAGTCATCCAATGGAGGCTTGCATTGTaGGATCTGTACAAAATAGCC +
Preference number: 4 (lower is better)
Translates to: SSPRRRRGERSLLSKVIQWRLAL*DLYKIA
Trigger: GGCTATTTTGTACAGATCCCACAATGCAAGCCTCCA...TTGGATGACTTTGGAGAGAAGACTCCTCTCTCCTCGTCTGCGGCGTGGACTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp ACTGCGTGTGTGGCTGAGCTACAAGTCTCCTGGAATGTAAACAATGTTGGTTTAAGCTTCACATTGCTCTaGCGTGGGGTGGAGGCTTGC +
Preference number: 4 (lower is better)
Translates to: TACVAELQVSWNVNNVGLSFTLL*RGVEAC
Trigger: GCAAGCCTCCACCCCACGCCAGAGCAATGTGAAGCT...TAAACCAACATTGTTTACATTCCAGGAGACTTGTAGCTCAGCCACACACGCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp ACTGCGTGTGTGGCTGAGCTACAAGTCTCCTGGAATGTAAACAATGTTGGTTTAAAGCATGCGCCATGGTaGCTGGGGAGAAGGCCAGAT +
Preference number: 4 (lower is better)
Translates to: TACVAELQVSWNVNNVGLKHAPW*LGRRPD
Trigger: ATCTGGCCTTCTCCCCAGCCACCATGGCGCATGCTT...TAAACCAACATTGTTTACATTCCAGGAGACTTGTAGCTCAGCCACACACGCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp GGAATGCAGATCTCGGTGGCAGGTGGCTCTGCACAGTCCAGAGTGATAAAACAAGCAAGTCTTCAGGCATaGTTGGAAGAAAAGCATGCG +
Preference number: 4 (lower is better)
Translates to: GMQISVAGGSAQSRVIKQASLQA*LEEKHA
Trigger: CGCATGCTTTTCTTCCAACCATGCCTGAAGACTTGC...TTGTTTTATCACTCTGGACTGTGCAGAGCCACCTGCCACCGAGATCTGCATTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp AGGACTAGATATTCATACATGCGAGAGCACACTGAGACTGCATGTTTATTTGGCAAGGAGGAAGACCACTaGGGGCAGCCCTCGGTCACA +
Preference number: 4 (lower is better)
Translates to: RTRYSYMREHTETACLFGKEEDH*GQPSVT
Trigger: TGTGACCGAGGGCTGCCCCCAGTGGTCTTCCTCCTT...GCCAAATAAACATGCAGTCTCAGTGTGCTCTCGCATGTATGAATATCTAGTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp ATCAAGTCCACGCCGCAGACGAGGAGAGAGGAGTCTTCTCTCCAAAGTCATCCAAGCTGTTGTTTTCCTTaGAGAGTTTTTCCACGGCGT +
Preference number: 4 (lower is better)
Translates to: IKSTPQTRREESSLQSHPSCCFP*RVFPRR
Trigger: ACGCCGTGGAAAAACTCTCCAAGGAAAACAACAGCT...TGGATGACTTTGGAGAGAAGACTCCTCTCTCCTCGTCTGCGGCGTGGACTTGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp CAGATCTCGGTGGCAGGTGGCTCTGCACAGTCCAGAGTGATAAAACAATCACAGACTGCCAGAGGGCAATaGTGTGTTTTAACTGGCATC +
Preference number: 4 (lower is better)
Translates to: QISVAGGSAQSRVIKQSQTARGQ*CVLTGI
Trigger: GATGCCAGTTAAAACACACCATTGCCCTCTGGCAGT...CTGTGATTGTTTTATCACTCTGGACTGTGCAGAGCCACCTGCCACCGAGATCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp ATCAAGTCCACGCCGCAGACGAGGAGAGAGGAGTCTTCTCTCCAAAGTCATCCATCCTCGGTTTGGGTTTaGGGGTTCTTTAGTTTCAAG +
Preference number: 4 (lower is better)
Translates to: IKSTPQTRREESSLQSHPSSVWV*GFFSFK
Trigger: CTTGAAACTAAAGAACCCCCAAACCCAAACCGAGGA...TGGATGACTTTGGAGAGAAGACTCCTCTCTCCTCGTCTGCGGCGTGGACTTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp TCGGCTTTCAAAAAGCTGTCAGCTCAGGTAGCACGCCTTGGTCTTGAATTCGGTAAGCGCTCCTCGGTTTaGGTTTGGGGGTTCTTTAGT +
Preference number: 4 (lower is better)
Translates to: SAFKKLSAQVARLGLEFGKRSSV*VWGFFS
Trigger: ACTAAAGAACCCCCAAACCCAAACCGAGGAGCGCTT...ACCGAATTCAAGACCAAGGCGTGCTACCTGAGCTGACAGCTTTTTGAAAGCCGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp TCAAGTCCACGCCGCAGACGAGGAGAGAGGAGTCTTCTCTCCAAAGTCATCCAAGAGCAGTATCTCTTCTaGGAACTGAGATGCCATTTC +
Preference number: 4 (lower is better)
Translates to: SSPRRRRGERSLLSKVIQEQYLF*ELRCHF
Trigger: GAAATGGCATCTCAGTTCCCAGAAGAGATACTGCTC...TTGGATGACTTTGGAGAGAAGACTCCTCTCTCCTCGTCTGCGGCGTGGACTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp GGGGAGTCTAAAACCAGCTGTAACCAAGTGTCTGTGTACGGGAACTGGTGTGGGGAGCAGTATCTCTTCTaGGAACTGAGATGCCATTTC +
Preference number: 4 (lower is better)
Translates to: GESKTSCNQVSVYGNWCGEQYLF*ELRCHF
Trigger: GAAATGGCATCTCAGTTCCCAGAAGAGATACTGCTC...CCCACACCAGTTCCCGTACACAGACACTTGGTTACAGCTGGTTTTAGACTCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR CCA 90 bp AGAAACAGCTCGGCTTTCAAAAAGCTGTCAGCTCAGGTAGCACGCCTTGGTCTTACACTGAGACACAGCTaGCGAGCAGTATCTCTTCTG +
Preference number: 4 (lower is better)
Translates to: RNSSAFKKLSAQVARLGLTLRHS*RAVSLL
Trigger: CAGAAGAGATACTGCTCGCCAGCTGTGTCTCAGTGT...AAGACCAAGGCGTGCTACCTGAGCTGACAGCTTTTTGAAAGCCGAGCTGTTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp TTCCAAAGACCAGTCTTACCAAGTTTCAGATGTCTGGACTCCAAGTGGCAGTTCTCCCGCCAGAAGAGCTaGAAGATGTGGCTGTCTCTG +
Preference number: 4 (lower is better)
Translates to: FQRPVLPSFRCLDSKWQFSRQKS*KMWLSL
Trigger: CAGAGACAGCCACATCTTCCAGCTCTTCTGGCGGGA...GAACTGCCACTTGGAGTCCAGACATCTGAAACTTGGTAAGACTGGTCTTTGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR CCA 90 bp ACCACAGAAAGGACTAGATATTCATACATGCGAGAGCACACTGAGACTGCATGTGCCTCGCTGATGTCCTaGAGCAGCTTTTTGGCCTGG +
Preference number: 4 (lower is better)
Translates to: TTERTRYSYMREHTETACASLMS*SSFLAW
Trigger: CCAGGCCAAAAAGCTGCTCCAGGACATCAGCGAGGC...ACATGCAGTCTCAGTGTGCTCTCGCATGTATGAATATCTAGTCCTTTCTGTGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp ACCACAGAAAGGACTAGATATTCATACATGCGAGAGCACACTGAGACTGCATGTAGGTCGATGAAGGCCTaGCTGAGCCTCTGCACACTG +
Preference number: 4 (lower is better)
Translates to: TTERTRYSYMREHTETACRSMKA*LSLCTL
Trigger: CAGTGTGCAGAGGCTCAGCCAGGCCTTCATCGACCT...ACATGCAGTCTCAGTGTGCTCTCGCATGTATGAATATCTAGTCCTTTCTGTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp GCCAGCTCTGAGGTATCAAAGGAGCTCCGAGTGCAAGTTGAAGACTTCAGCAAGTGCTCCATTCGCTTCTaGGTCACAAATCTCTTCCAG +
Preference number: 4 (lower is better)
Translates to: ASSEVSKELRVQVEDFSKCSIRF*VTNLFQ
Trigger: CTGGAAGAGATTTGTGACCCAGAAGCGAATGGAGCA...CTTGCTGAAGTCTTCAACTTGCACTCGGAGCTCCTTTGATACCTCAGAGCTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp CAGATCTCGGTGGCAGGTGGCTCTGCACAGTCCAGAGTGATAAAACAATCACAGATTGAAGAAAACGTATaGGTGAGGCTCCGACTCCCA +
Preference number: 4 (lower is better)
Translates to: QISVAGGSAQSRVIKQSQIEENV*VRLRLP
Trigger: TGGGAGTCGGAGCCTCACCCATACGTTTTCTTCAAT...CTGTGATTGTTTTATCACTCTGGACTGTGCAGAGCCACCTGCCACCGAGATCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp TCGGCTTTCAAAAAGCTGTCAGCTCAGGTAGCACGCCTTGGTCTTGAATTCGGTCCAAGTTCTTGGCGATaGTTTTCCTCAGAGGTACGC +
Preference number: 4 (lower is better)
Translates to: SAFKKLSAQVARLGLEFGPSSWR*FSSEVR
Trigger: GCGTACCTCTGAGGAAAACCATCGCCAAGAACTTGG...ACCGAATTCAAGACCAAGGCGTGCTACCTGAGCTGACAGCTTTTTGAAAGCCGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp GGAATGCAGATCTCGGTGGCAGGTGGCTCTGCACAGTCCAGAGTGATAAAACAAGTGCCACGTAGTTTTTaGTCAGCACGAGTAAGTAGC +
Preference number: 4 (lower is better)
Translates to: GMQISVAGGSAQSRVIKQVPRSF*SARVSS
Trigger: GCTACTTACTCGTGCTGACCAAAAACTACGTGGCAC...TTGTTTTATCACTCTGGACTGTGCAGAGCCACCTGCCACCGAGATCTGCATTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp CAGATCTCGGTGGCAGGTGGCTCTGCACAGTCCAGAGTGATAAAACAATCACAGGTGCCACGTAGTTTTTaGTCAGCACGAGTAAGTAGC +
Preference number: 4 (lower is better)
Translates to: QISVAGGSAQSRVIKQSQVPRSF*SARVSS
Trigger: GCTACTTACTCGTGCTGACCAAAAACTACGTGGCAC...CTGTGATTGTTTTATCACTCTGGACTGTGCAGAGCCACCTGCCACCGAGATCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp GATGAGAAAGTTTCAGAACATGTATGTACATGGTTCAGAAACAGCTCGGCTTTCCGACATTTGACGCGGTaGGTCCCCAGACCGAGGTCC +
Preference number: 4 (lower is better)
Translates to: DEKVSEHVCTWFRNSSAFRHLTR*VPRPRS
Trigger: GGACCTCGGTCTGGGGACCCACCGCGTCAAATGTCG...GAAAGCCGAGCTGTTTCTGAACCATGTACATACATGTTCTGAAACTTTCTCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp GATGAGAAAGTTTCAGAACATGTATGTACATGGTTCAGAAACAGCTCGGCTTTCGCAGCCACAGGAGTGTaGGTTTCGGAGCCCTGCCTG +
Preference number: 4 (lower is better)
Translates to: DEKVSEHVCTWFRNSSAFAATGV*VSEPCL
Trigger: CAGGCAGGGCTCCGAAACCCACACTCCTGTGGCTGC...GAAAGCCGAGCTGTTTCTGAACCATGTACATACATGTTCTGAAACTTTCTCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp GATGAGAAAGTTTCAGAACATGTATGTACATGGTTCAGAAACAGCTCGGCTTTCGGGGTGACAGCACCTTaGACCCGCTTCCAGAGGGTG +
Preference number: 4 (lower is better)
Translates to: DEKVSEHVCTWFRNSSAFGVTAP*TRFQRV
Trigger: CACCCTCTGGAAGCGGGTCCAAGGTGCTGTCACCCC...GAAAGCCGAGCTGTTTCTGAACCATGTACATACATGTTCTGAAACTTTCTCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp GGAATGCAGATCTCGGTGGCAGGTGGCTCTGCACAGTCCAGAGTGATAAAACAAAGATGGTCAGGATTCTaGAAAAGTTCTGCAGACGGC +
Preference number: 4 (lower is better)
Translates to: GMQISVAGGSAQSRVIKQRWSGF*KSSADG
Trigger: GCCGTCTGCAGAACTTTTCCAGAATCCTGACCATCT...TTGTTTTATCACTCTGGACTGTGCAGAGCCACCTGCCACCGAGATCTGCATTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp TCAAGTCCACGCCGCAGACGAGGAGAGAGGAGTCTTCTCTCCAAAGTCATCCAAGAACCTGAGGGTAGATaGTCAGGATTCTGGAAAAGT +
Preference number: 4 (lower is better)
Translates to: SSPRRRRGERSLLSKVIQEPEGR*SGFWKS
Trigger: ACTTTTCCAGAATCCTGACCATCTACCCTCAGGTTC...TTGGATGACTTTGGAGAGAAGACTCCTCTCTCCTCGTCTGCGGCGTGGACTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp CACGCCGCAGACGAGGAGAGAGGAGTCTTCTCTCCAAAGTCATCCAAAGATAGCCACAGGTTTCTCGCCTaGAAGAACCTTTCCTTTTTG +
Preference number: 4 (lower is better)
Translates to: HAADEERGVFSPKSSKDSHRFLA*KNLSFL
Trigger: CAAAAAGGAAAGGTTCTTCCAGGCGAGAAACCTGTG...GCTATCTTTGGATGACTTTGGAGAGAAGACTCCTCTCTCCTCGTCTGCGGCGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR CCA 90 bp TGCACTTTCCTGGCGCTTGTTTTTCCAGCTGGAAACGGGATTCGTAATGGTAATGTGATGAGGCATCCATaGCGGAAACGGGAACTGCAG +
Preference number: 4 (lower is better)
Translates to: CTFLALVFPAGNGIRNGNVMRHP*RKRELQ
Trigger: CTGCAGTTCCCGTTTCCGCCATGGATGCCTCATCAC...ATTACCATTACGAATCCCGTTTCCAGCTGGAAAAACAAGCGCCAGGAAAGTGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR CCA 90 bp GTTTTCCAGCAGGGTCTCAAAGGAAGTAATGGGCATAAATCAAAAGGCGCTGCTTCCTGTTCCAGCCACTaGTTCACGCACACTAGCCAG +
Preference number: 4 (lower is better)
Translates to: VFQQGLKGSNGHKSKGAASCSSH*FTHTSQ
Trigger: CTGGCTAGTGTGCGTGAACCAGTGGCTGGAACAGGA...AGCAGCGCCTTTTGATTTATGCCCATTACTTCCTTTGAGACCCTGCTGGAAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000573038.1
CDS-3UTR CCA 90 bp CAGATCTCGGTGGCAGGTGGCTCTGCACAGTCCAGAGTGATAAAACAATCACAGAGACAATATGTGGGGTaGTCTCCTCCCTTAAGAGCA +
Preference number: 4 (lower is better)
Translates to: QISVAGGSAQSRVIKQSQRQYVG*SPPLRA
Trigger: TGCTCTTAAGGGAGGAGACCACCCCACATATTGTCT...CTGTGATTGTTTTATCACTCTGGACTGTGCAGAGCCACCTGCCACCGAGATCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR TCA 90 bp AGAAACAGCTCGGCTTTCAAAAAGCTGTCAGCTCAGGTAGCACGCCTTGGTCTTGGATTGAATGGGAAATaGAGAGAGATGATGGCGTGG +
Preference number: 4 (lower is better)
Translates to: RNSSAFKKLSAQVARLGLGLNGK*REMMAW
Trigger: CCACGCCATCATCTCTCTTCATTTCCCATTCAATCC...AAGACCAAGGCGTGCTACCTGAGCTGACAGCTTTTTGAAAGCCGAGCTGTTTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp TTCCAAAGACCAGTCTTACCAAGTTTCAGATGTCTGGACTCCAAGTGGCAGTTCTGGCTTAGGTCACGGTaGAACTCATCTGGTGAGCTG +
Preference number: 4 (lower is better)
Translates to: FQRPVLPSFRCLDSKWQFWLRSR*NSSGEL
Trigger: CAGCTCACCAGATGAGTTTCACCGTGACCTAAGCCA...GAACTGCCACTTGGAGTCCAGACATCTGAAACTTGGTAAGACTGGTCTTTGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR TCA 90 bp TCAAGTCCACGCCGCAGACGAGGAGAGAGGAGTCTTCTCTCCAAAGTCATCCAAATATACATAACCAGGTaGCTCAGAGGTAGCAGACTA +
Preference number: 4 (lower is better)
Translates to: SSPRRRRGERSLLSKVIQIYITR*LRGSRL
Trigger: TAGTCTGCTACCTCTGAGTCACCTGGTTATGTATAT...TTGGATGACTTTGGAGAGAAGACTCCTCTCTCCTCGTCTGCGGCGTGGACTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp AGAAACAGCTCGGCTTTCAAAAAGCTGTCAGCTCAGGTAGCACGCCTTGGTCTTCCGGTAGTAAATCCCTaGAAGACAGTCCAGGATATG +
Preference number: 4 (lower is better)
Translates to: RNSSAFKKLSAQVARLGLPVVNP*KTVQDM
Trigger: CATATCCTGGACTGTCTTTCAGGGATTTACTACCGG...AAGACCAAGGCGTGCTACCTGAGCTGACAGCTTTTTGAAAGCCGAGCTGTTTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp GCCAGCTCTGAGGTATCAAAGGAGCTCCGAGTGCAAGTTGAAGACTTCAGCAAGATGTTGCAAAACGGCTaGTATCAGGAGGTGAAAGGA +
Preference number: 4 (lower is better)
Translates to: ASSEVSKELRVQVEDFSKMLQNG*YQEVKG
Trigger: TCCTTTCACCTCCTGATATCAGCCGTTTTGCAACAT...CTTGCTGAAGTCTTCAACTTGCACTCGGAGCTCCTTTGATACCTCAGAGCTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp TGCACTTTCCTGGCGCTTGTTTTTCCAGCTGGAAACGGGATTCGTAATGGTAATACTGTGATCCTGTTGTaGAGCAGCTGCCTCAACCCA +
Preference number: 4 (lower is better)
Translates to: CTFLALVFPAGNGIRNGNTVILL*SSCLNP
Trigger: TGGGTTGAGGCAGCTGCTTCACAACAGGATCACAGT...ATTACCATTACGAATCCCGTTTCCAGCTGGAAAAACAAGCGCCAGGAAAGTGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR TCA 90 bp ATCAAGTCCACGCCGCAGACGAGGAGAGAGGAGTCTTCTCTCCAAAGTCATCCAATTTGCAGGATGTCTTaGGTATACACATTCAGCTGC +
Preference number: 4 (lower is better)
Translates to: IKSTPQTRREESSLQSHPICRMS*VYTFSC
Trigger: GCAGCTGAATGTGTATACTCAAGACATCCTGCAAAT...TGGATGACTTTGGAGAGAAGACTCCTCTCTCCTCGTCTGCGGCGTGGACTTGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp TCGGCTTTCAAAAAGCTGTCAGCTCAGGTAGCACGCCTTGGTCTTGAATTCGGTCCCATTCATCGGATATaGGGTCTACAGCAGCATCTA +
Preference number: 4 (lower is better)
Translates to: SAFKKLSAQVARLGLEFGPIHRI*GLQQHL
Trigger: TAGATGCTGCTGTAGACCTCATATCCGATGAATGGG...ACCGAATTCAAGACCAAGGCGTGCTACCTGAGCTGACAGCTTTTTGAAAGCCGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000508628.6
CDS-3UTR TCA 90 bp GCACCAGTCCATGATCAAGTCCACGCCGCAGACGAGGAGAGAGGAGTCTTCTCTTTAATCTTTTACTGCTaGGGTCTTGTGAGTGTCTTA +
Preference number: 4 (lower is better)
Translates to: APVHDQVHAADEERGVFSLIFYC*GLVSVL
Trigger: TAAGACACTCACAAGACCTCAGCAGTAAAAGATTAA...AGAGAAGACTCCTCTCTCCTCGTCTGCGGCGTGGACTTGATCATGGACTGGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp AGGACTAGATATTCATACATGCGAGAGCACACTGAGACTGCATGTTTATTTGGCTCGGGGGCTGCTTCCTaGGCTCAGTGCTCAGGTAAA +
Preference number: 4 (lower is better)
Translates to: RTRYSYMREHTETACLFGSGAAS*AQCSGK
Trigger: TTTACCTGAGCACTGAGCTCAGGAAGCAGCCCCCGA...GCCAAATAAACATGCAGTCTCAGTGTGCTCTCGCATGTATGAATATCTAGTCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp GAGTCCTGGACAAGCATTTTGTATTTTTGTAGTTCTCACTCCTTAGGCCCAATTGCGGGAGCTCTTCCATaGCTCTCCTCATGCGGTACC +
Preference number: 4 (lower is better)
Translates to: ESWTSILYFCSSHSLGPIAGALP*LSSCGT
Trigger: GGTACCGCATGAGGAGAGTCATGGAAGAGCTCCCGC...AATTGGGCCTAAGGAGTGAGAACTACAAAAATACAAAATGCTTGTCCAGGACTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp ACCACAGAAAGGACTAGATATTCATACATGCGAGAGCACACTGAGACTGCATGTCCCCATCACAGACCATaGCGAGCTGGTAGTCTTCTC +
Preference number: 4 (lower is better)
Translates to: TTERTRYSYMREHTETACPHHRP*RAGSLL
Trigger: GAGAAGACTACCAGCTCGTCATGGTCTGTGATGGGG...ACATGCAGTCTCAGTGTGCTCTCGCATGTATGAATATCTAGTCCTTTCTGTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp TCGGCTTTCAAAAAGCTGTCAGCTCAGGTAGCACGCCTTGGTCTTGAATTCGGTTGGCCATCCACCATATaGTCACACAGGACTTCTTTG +
Preference number: 4 (lower is better)
Translates to: SAFKKLSAQVARLGLEFGWPSTI*SHRTSL
Trigger: CAAAGAAGTCCTGTGTGATCATATGGTGGATGGCCA...ACCGAATTCAAGACCAAGGCGTGCTACCTGAGCTGACAGCTTTTTGAAAGCCGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp ACTGCGTGTGTGGCTGAGCTACAAGTCTCCTGGAATGTAAACAATGTTGGTTTACGCAGAGGACTTCTGTaGTCACGCGAGTCCCGTTTT +
Preference number: 4 (lower is better)
Translates to: TACVAELQVSWNVNNVGLRRGLL*SRESRF
Trigger: AAAACGGGACTCGCGTGATCACAGAAGTCCTCTGCG...TAAACCAACATTGTTTACATTCCAGGAGACTTGTAGCTCAGCCACACACGCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp CAATTTCAAAATGTCAGATCAGAAGAATCTTTGGCGATTAATCCACTCTCCATTAGGTCCTTCCCCTGCTaGAAGCGGGCGCACTGCCGG +
Preference number: 4 (lower is better)
Translates to: QFQNVRSEESLAINPLSIRSFPC*KRAHCR
Trigger: CCGGCAGTGCGCCCGCTTTCAGCAGGGGAAGGACCT...AATGGAGAGTGGATTAATCGCCAAAGATTCTTCTGATCTGACATTTTGAAATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp TGCACTTTCCTGGCGCTTGTTTTTCCAGCTGGAAACGGGATTCGTAATGGTAATGTGTGCAGGTGTGCCTaGAGGAAATCTGCAAAGGAG +
Preference number: 4 (lower is better)
Translates to: CTFLALVFPAGNGIRNGNVCRCA*RKSAKE
Trigger: CTCCTTTGCAGATTTCCTTCAGGCACACCTGCACAC...ATTACCATTACGAATCCCGTTTCCAGCTGGAAAAACAAGCGCCAGGAAAGTGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR TCA 90 bp ACCACAGAAAGGACTAGATATTCATACATGCGAGAGCACACTGAGACTGCATGTTCTGCAGACGGCTTCTaGAACGCTGGTAGGCAAGGT +
Preference number: 4 (lower is better)
Translates to: TTERTRYSYMREHTETACSADGF*NAGRQG
Trigger: ACCTTGCCTACCAGCGTTTCAGAAGCCGTCTGCAGA...ACATGCAGTCTCAGTGTGCTCTCGCATGTATGAATATCTAGTCCTTTCTGTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp AGAAACAGCTCGGCTTTCAAAAAGCTGTCAGCTCAGGTAGCACGCCTTGGTCTTGTATCACTGAGCGGATaGCAGGAGTCTTATCCACAA +
Preference number: 4 (lower is better)
Translates to: RNSSAFKKLSAQVARLGLVSLSG*QESYPQ
Trigger: TTGTGGATAAGACTCCTGTCATCCGCTCAGTGATAC...AAGACCAAGGCGTGCTACCTGAGCTGACAGCTTTTTGAAAGCCGAGCTGTTTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp GAGTCCTGGACAAGCATTTTGTATTTTTGTAGTTCTCACTCCTTAGGCCCAATTAGCGCAGCGGCAATCTaGTTCCCCTTCACCAGGTCC +
Preference number: 4 (lower is better)
Translates to: ESWTSILYFCSSHSLGPISAAAI*FPFTRS
Trigger: GGACCTGGTGAAGGGGAAGCAGATTGCCGCTGCGCT...AATTGGGCCTAAGGAGTGAGAACTACAAAAATACAAAATGCTTGTCCAGGACTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp AGAAACAGCTCGGCTTTCAAAAAGCTGTCAGCTCAGGTAGCACGCCTTGGTCTTACGTCCTTGTGTCCATaGATCTTTGGCACAGGTTCA +
Preference number: 4 (lower is better)
Translates to: RNSSAFKKLSAQVARLGLTSLCP*IFGTGS
Trigger: TGAACCTGTGCCAAAGATGCATGGACACAAGGACGT...AAGACCAAGGCGTGCTACCTGAGCTGACAGCTTTTTGAAAGCCGAGCTGTTTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp ACTGCGTGTGTGGCTGAGCTACAAGTCTCCTGGAATGTAAACAATGTTGGTTTACTCTCGGCCCCGGCTTaGTGGAGAATATGCCTTAAG +
Preference number: 4 (lower is better)
Translates to: TACVAELQVSWNVNNVGLLSAPA*WRICLK
Trigger: CTTAAGGCATATTCTCCAGCAAGCCGGGGCCGAGAG...TAAACCAACATTGTTTACATTCCAGGAGACTTGTAGCTCAGCCACACACGCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp GATGAGAAAGTTTCAGAACATGTATGTACATGGTTCAGAAACAGCTCGGCTTTCTGCCGCAGCCCCTGCTaGTTGACAACGTCCTTGGGA +
Preference number: 4 (lower is better)
Translates to: DEKVSEHVCTWFRNSSAFCRSPC*LTTSLG
Trigger: TCCCAAGGACGTTGTCAAGCAGCAGGGGCTGCGGCA...GAAAGCCGAGCTGTTTCTGAACCATGTACATACATGTTCTGAAACTTTCTCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp GAAAGTTTCAGAACATGTATGTACATGGTTCAGAAACAGCTCGGCTTTCAAAAAACCACGTCTCTCCGCTaGGGGTTGCCCAGCACGTGG +
Preference number: 4 (lower is better)
Translates to: ESFRTCMYMVQKQLGFQKTTSLR*GLPSTW
Trigger: CCACGTGCTGGGCAACCCGCAGCGGAGAGACGTGGT...TTTTTGAAAGCCGAGCTGTTTCTGAACCATGTACATACATGTTCTGAAACTTTC
49% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp TCGGCTTTCAAAAAGCTGTCAGCTCAGGTAGCACGCCTTGGTCTTGAATTCGGTTTCAGGATGTGCTGCTaGAGAAAGCCTTTTGGATCC +
Preference number: 4 (lower is better)
Translates to: SAFKKLSAQVARLGLEFGFRMCC*RKPFGS
Trigger: GGATCCAAAAGGCTTTCTGCAGCAGCACATCCTGAA...ACCGAATTCAAGACCAAGGCGTGCTACCTGAGCTGACAGCTTTTTGAAAGCCGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp CACGCCGCAGACGAGGAGAGAGGAGTCTTCTCTCCAAAGTCATCCAAAGATAGCTTCTGTTCCACAATGTaGTGGAGGTACTCAACTGTA +
Preference number: 4 (lower is better)
Translates to: HAADEERGVFSPKSSKDSFCSTM*WRYSTV
Trigger: TACAGTTGAGTACCTCCAGCACATTGTGGAACAGAA...GCTATCTTTGGATGACTTTGGAGAGAAGACTCCTCTCTCCTCGTCTGCGGCGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp GAGTCCTGGACAAGCATTTTGTATTTTTGTAGTTCTCACTCCTTAGGCCCAATTCCTGCACGGTCTCTCTaGCCTCCTCCACCTGGTACT +
Preference number: 4 (lower is better)
Translates to: ESWTSILYFCSSHSLGPIPARSL*PPPPGT
Trigger: AGTACCAGGTGGAGGAGGGCAGAGAGACCGTGCAGG...AATTGGGCCTAAGGAGTGAGAACTACAAAAATACAAAATGCTTGTCCAGGACTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp GGAATGCAGATCTCGGTGGCAGGTGGCTCTGCACAGTCCAGAGTGATAAAACAAGTATACACATTCAGCTaGATGTTTGGATCCCCACCA +
Preference number: 4 (lower is better)
Translates to: GMQISVAGGSAQSRVIKQVYTFS*MFGSPP
Trigger: TGGTGGGGATCCAAACATGCAGCTGAATGTGTATAC...TTGTTTTATCACTCTGGACTGTGCAGAGCCACCTGCCACCGAGATCTGCATTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp TGCACTTTCCTGGCGCTTGTTTTTCCAGCTGGAAACGGGATTCGTAATGGTAATCCAAATGGCTCTTTGTaGAGCCGCAGCAGCTGTTCA +
Preference number: 4 (lower is better)
Translates to: CTFLALVFPAGNGIRNGNPNGSL*SRSSCS
Trigger: TGAACAGCTGCTGCGGCTGCACAAAGAGCCATTTGG...ATTACCATTACGAATCCCGTTTCCAGCTGGAAAAACAAGCGCCAGGAAAGTGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR GCA 90 bp GAGTCCTGGACAAGCATTTTGTATTTTTGTAGTTCTCACTCCTTAGGCCCAATTAGGAAGTGCTCCATCTaGCTGCAGAGGGCTGCCAGC +
Preference number: 4 (lower is better)
Translates to: ESWTSILYFCSSHSLGPIRKCSI*LQRAAS
Trigger: GCTGGCAGCCCTCTGCAGGCAGATGGAGCACTTCCT...AATTGGGCCTAAGGAGTGAGAACTACAAAAATACAAAATGCTTGTCCAGGACTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp GATGAGAAAGTTTCAGAACATGTATGTACATGGTTCAGAAACAGCTCGGCTTTCGCATCACTCGGGGGCTaGTTCCTGAGCTCAGTGCTC +
Preference number: 4 (lower is better)
Translates to: DEKVSEHVCTWFRNSSAFASLGG*FLSSVL
Trigger: GAGCACTGAGCTCAGGAAGCAGCCCCCGAGTGATGC...GAAAGCCGAGCTGTTTCTGAACCATGTACATACATGTTCTGAAACTTTCTCATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp TGCTGGCCAGTCTATCTTACACAAAGTTTTAAGTTTTCCTGGTGTCATAGTACTCGAGAGACTTGGAGCTaGCGGGCTTCCCCACCAGGA +
Preference number: 4 (lower is better)
Translates to: CWPVYLTQSFKFSWCHSTRETWS*RASPPG
Trigger: TCCTGGTGGGGAAGCCCGGCAGCTCCAAGTCTCTCG...AGTACTATGACACCAGGAAAACTTAAAACTTTGTGTAAGATAGACTGGCCAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR GCA 90 bp TTTTTCCAGCTGGAAACGGGATTCGTAATGGTAATGGTTGAACTTAATGAACGTGCCCTGCATGGCGTCTaGCACGATGGTCTTGGCGAG +
Preference number: 4 (lower is better)
Translates to: FFQLETGFVMVMVELNERALHGV*HDGLGE
Trigger: CTCGCCAAGACCATCGTGGCAGACGCCATGCAGGGC...ACGTTCATTAAGTTCAACCATTACCATTACGAATCCCGTTTCCAGCTGGAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR GCA 90 bp TCGGCTTTCAAAAAGCTGTCAGCTCAGGTAGCACGCCTTGGTCTTGAATTCGGTTTCTGTTTGATCAGCTaGATGGGGCTGACTTCCTCT +
Preference number: 4 (lower is better)
Translates to: SAFKKLSAQVARLGLEFGFCLIS*MGLTSS
Trigger: AGAGGAAGTCAGCCCCATGCAGCTGATCAAACAGAA...ACCGAATTCAAGACCAAGGCGTGCTACCTGAGCTGACAGCTTTTTGAAAGCCGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp TGCTGGCCAGTCTATCTTACACAAAGTTTTAAGTTTTCCTGGTGTCATAGTACTAAGGCCCGGGGACCCTaGCTCTCTATGACCTGCAGC +
Preference number: 4 (lower is better)
Translates to: CWPVYLTQSFKFSWCHSTKARGP*LSMTCS
Trigger: GCTGCAGGTCATAGAGAGGCAGGGTCCCCGGGCCTT...AGTACTATGACACCAGGAAAACTTAAAACTTTGTGTAAGATAGACTGGCCAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR GCA 90 bp GTTCTAGACCACAGGTTTCTCGCCTGGAAGAACCTTTCCTTTTTGGAAGAGAAATCCGCATATTGCGCGTaGAGCTCTCGTTCTGGTCTC +
Preference number: 4 (lower is better)
Translates to: VLDHRFLAWKNLSFLEEKSAYCA*SSRSGL
Trigger: GAGACCAGAACGAGAGCTGCACGCGCAATATGCGGA...TTTCTCTTCCAAAAAGGAAAGGTTCTTCCAGGCGAGAAACCTGTGGTCTAGAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR GCA 90 bp TGCTGGCCAGTCTATCTTACACAAAGTTTTAAGTTTTCCTGGTGTCATAGTACTCGCTTCCAGAGGGTGTaGCTGAATGTGCCCGCCTCC +
Preference number: 4 (lower is better)
Translates to: CWPVYLTQSFKFSWCHSTRFQRV*LNVPAS
Trigger: GGAGGCGGGCACATTCAGGCACACCCTCTGGAAGCG...AGTACTATGACACCAGGAAAACTTAAAACTTTGTGTAAGATAGACTGGCCAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR GCA 90 bp GAGTCCTGGACAAGCATTTTGTATTTTTGTAGTTCTCACTCCTTAGGCCCAATTCTCCGTGCAGGCCATTaGGGCAAATGCGTCCAGGGT +
Preference number: 4 (lower is better)
Translates to: ESWTSILYFCSSHSLGPILRAGH*GKCVQG
Trigger: ACCCTGGACGCATTTGCCGCAATGGCCTGCACGGAG...AATTGGGCCTAAGGAGTGAGAACTACAAAAATACAAAATGCTTGTCCAGGACTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp TCACAATTTCAAAATGTCAGATCAGAAGAATCTTTGGCGATTAATCCACTCTCCGGGCCAGGCTCCCGCTaGCTTGCATGTGCTCATCGG +
Preference number: 4 (lower is better)
Translates to: SQFQNVRSEESLAINPLSGPGSR*LACAHR
Trigger: CCGATGAGCACATGCAAGGCAGCGGGAGCCTGGCCC...GGAGAGTGGATTAATCGCCAAAGATTCTTCTGATCTGACATTTTGAAATTGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp AGAATGAATATTAAGGATACTGCCTCTAACATATCAATAGCTGTGCTGAGCTGTAGGCAGCGCAGGCAGTaGACGTGGTCGCAGGGCAGA +
Preference number: 4 (lower is better)
Translates to: RMNIKDTASNISIAVLSCRQRRQ*TWSQGR
Trigger: TCTGCCCTGCGACCACGTGCACTGCCTGCGCTGCCT...ACAGCTCAGCACAGCTATTGATATGTTAGAGGCAGTATCCTTAATATTCATTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp TTCCAAAGACCAGTCTTACCAAGTTTCAGATGTCTGGACTCCAAGTGGCAGTTCCTACGAAGAAACTGTTaGACATCTGCCGGAAGCGGG +
Preference number: 4 (lower is better)
Translates to: FQRPVLPSFRCLDSKWQFLRRNC*TSAGSG
Trigger: CCCGCTTCCGGCAGATGTGCAACAGTTTCTTCGTAG...GAACTGCCACTTGGAGTCCAGACATCTGAAACTTGGTAAGACTGGTCTTTGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR GCA 90 bp AAAGGAAGTAATGGGCATAAATCAAAAGGCGCTGCTGATGGACTTGGCAGATCAGCAGGCTCCAAGGGATaGCACCTGGTATCAGAGAGA +
Preference number: 4 (lower is better)
Translates to: KGSNGHKSKGAADGLGRSAGSKG*HLVSER
Trigger: TCTCTCTGATACCAGGTGGCATCCCTTGGAGCCTGC...TGATCTGCCAAGTCCATCAGCAGCGCCTTTTGATTTATGCCCATTACTTCCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573038.1
CDS-3UTR GCA 90 bp CAATTTCAAAATGTCAGATCAGAAGAATCTTTGGCGATTAATCCACTCTCCATTGCCTGGTGGAGCACTTaGTGGACCCAGGGCCCCTCC +
Preference number: 4 (lower is better)
Translates to: QFQNVRSEESLAINPLSIAWWST*WTQGPS
Trigger: GGAGGGGCCCTGGGTCCAGCAAGTGCTCCACCAGGC...AATGGAGAGTGGATTAATCGCCAAAGATTCTTCTGATCTGACATTTTGAAATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR GCA 90 bp TTTCAGGCAGGGCATGGGGGACTCCTTCTGAGGCAGAGGTGTAAGCGTTTCAGTTTACAGGTTACCTTGTaGCATACCTTTGAAACAAGG +
Preference number: 4 (lower is better)
Translates to: FQAGHGGLLLRQRCKRFSLQVTL*HTFETR
Trigger: CCTTGTTTCAAAGGTATGGCACAAGGTAACCTGTAA...ACTGAAACGCTTACACCTCTGCCTCAGAAGGAGTCCCCCATGCCCTGCCTGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR CCA 90 bp GTCTCTTCTAAAAATACAAAAGGAACCGAGTGTGGCGGCACATTGTTCTTTAAACGGTCCAGGAGGCTTTaGAACAGGGCTCCTCGGGGT +
Preference number: 4 (lower is better)
Translates to: VSSKNTKGTECGGTLFFKRSRRL*NRAPRG
Trigger: ACCCCGAGGAGCCCTGTTCCAAAGCCTCCTGGACCG...TTTAAAGAACAATGTGCCGCCACACTCGGTTCCTTTTGTATTTTTAGAAGAGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000319921.4
CDS-3UTR CCA 90 bp CAATTTCAAAATGTCAGATCAGAAGAATCTTTGGCGATTAATCCACTCTCCATTGGCTCGGCTGGCCAGTaGGGCCACTCTGCTGGGCTT +
Preference number: 4 (lower is better)
Translates to: QFQNVRSEESLAINPLSIGSAGQ*GHSAGL
Trigger: AAGCCCAGCAGAGTGGCCCCACTGGCCAGCCGAGCC...AATGGAGAGTGGATTAATCGCCAAAGATTCTTCTGATCTGACATTTTGAAATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp ATGGCATACGAACAATATCTCAACAAAGAGTTAACGAAAAAGGGAAAGGAAAACGCCGTCACCCTCCAGTaGCGTGGTGGCTGTGCCTGG +
Preference number: 4 (lower is better)
Translates to: MAYEQYLNKELTKKGKENAVTLQ*RGGCAW
Trigger: CCAGGCACAGCCACCACGCCACTGGAGGGTGACGGC...GTTTTCCTTTCCCTTTTTCGTTAACTCTTTGTTGAGATATTGTTCGTATGCCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000319921.4
CDS-3UTR CCA 90 bp CAATTTCAAAATGTCAGATCAGAAGAATCTTTGGCGATTAATCCACTCTCCATTGCCGTCACCCTCCAGTaGCGTGGTGGCTGTGCCTGG +
Preference number: 4 (lower is better)
Translates to: QFQNVRSEESLAINPLSIAVTLQ*RGGCAW
Trigger: CCAGGCACAGCCACCACGCCACTGGAGGGTGACGGC...AATGGAGAGTGGATTAATCGCCAAAGATTCTTCTGATCTGACATTTTGAAATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp TGCTGGCCAGTCTATCTTACACAAAGTTTTAAGTTTTCCTGGTGTCATAGTACTGGGATGGAAGCGTCCTaGTCCTCCCCTTCCGTGTGG +
Preference number: 4 (lower is better)
Translates to: CWPVYLTQSFKFSWCHSTGMEAS*SSPSVW
Trigger: CCACACGGAAGGGGAGGACCAGGACGCTTCCATCCC...AGTACTATGACACCAGGAAAACTTAAAACTTTGTGTAAGATAGACTGGCCAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR CCA 90 bp ATTGTTTATGCCTGCAGAGGGGAGTGGGTGACTAGAGGGGAGGAGGATGATGGCTATCTAGGTGCTTCTTaGAAATGCAGACAATGCCTT +
Preference number: 4 (lower is better)
Translates to: IVYACRGEWVTRGEEDDGYLGAS*KCRQCL
Trigger: AAGGCATTGTCTGCATTTCCAAGAAGCACCTAGATA...GCCATCATCCTCCTCCCCTCTAGTCACCCACTCCCCTCTGCAGGCATAAACAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319921.4
CDS-3UTR CCA 90 bp GCACCAGTCCATGATCAAGTCCACGCCGCAGACGAGGAGAGAGGAGTCTTCTCTCCTTGGAAGACTGTTTaGACTGAATTATTTCCAGTT +
Preference number: 4 (lower is better)
Translates to: APVHDQVHAADEERGVFSPWKTV*TELFPV
Trigger: AACTGGAAATAATTCAGTCCAAACAGTCTTCCAAGG...AGAGAAGACTCCTCTCTCCTCGTCTGCGGCGTGGACTTGATCATGGACTGGTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp AGGAGGATGATGGCTAAAGGGGCCGGGTTTCTCTTTGAAGTGATGAAAATGCTCGCAGCAAGGGTCCCTTaGAAGACTGTTTGGACTGAA +
Preference number: 4 (lower is better)
Translates to: RRMMAKGAGFLFEVMKMLAARVP*KTVWTE
Trigger: TTCAGTCCAAACAGTCTTCCAAGGGACCCTTGCTGC...GAGCATTTTCATCACTTCAAAGAGAAACCCGGCCCCTTTAGCCATCATCCTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319921.4
CDS-3UTR CCA 90 bp TCGGCTTTCAAAAAGCTGTCAGCTCAGGTAGCACGCCTTGGTCTTGAATTCGGTATTTCTCGAAGGTCTTaGCCACACTGTCCTCTAAGC +
Preference number: 4 (lower is better)
Translates to: SAFKKLSAQVARLGLEFGISRRS*PHCPLS
Trigger: GCTTAGAGGACAGTGTGGCCAAGACCTTCGAGAAAT...ACCGAATTCAAGACCAAGGCGTGCTACCTGAGCTGACAGCTTTTTGAAAGCCGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp CAATTTCAAAATGTCAGATCAGAAGAATCTTTGGCGATTAATCCACTCTCCATTTCCATCTGGCCTGGGTaGTCCTGCCGCAGCCCCTGC +
Preference number: 4 (lower is better)
Translates to: QFQNVRSEESLAINPLSISIWPG*SCRSPC
Trigger: GCAGGGGCTGCGGCAGGACCACCCAGGCCAGATGGA...AATGGAGAGTGGATTAATCGCCAAAGATTCTTCTGATCTGACATTTTGAAATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp TTCCAAAGACCAGTCTTACCAAGTTTCAGATGTCTGGACTCCAAGTGGCAGTTCAGCAAGGATGGCCGTTaGGACAAGTGTACCAGTGGA +
Preference number: 4 (lower is better)
Translates to: FQRPVLPSFRCLDSKWQFSKDGR*DKCTSG
Trigger: TCCACTGGTACACTTGTCCCAACGGCCATCCTTGCT...GAACTGCCACTTGGAGTCCAGACATCTGAAACTTGGTAAGACTGGTCTTTGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR CCA 90 bp ACCACAGAAAGGACTAGATATTCATACATGCGAGAGCACACTGAGACTGCATGTCCTCCAATCGGCGCATaGCAGTCAATGCAGATGCTC +
Preference number: 4 (lower is better)
Translates to: TTERTRYSYMREHTETACPPIGA*QSMQML
Trigger: GAGCATCTGCATTGACTGCCATGCGCCGATTGGAGG...ACATGCAGTCTCAGTGTGCTCTCGCATGTATGAATATCTAGTCCTTTCTGTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp TTTTTCCAGCTGGAAACGGGATTCGTAATGGTAATGGTTGAACTTAATGAACGTGGGTTGCCCAGCACGTaGCCGGTCTGCGTTCTGTCT +
Preference number: 4 (lower is better)
Translates to: FFQLETGFVMVMVELNERGLPST*PVCVLS
Trigger: AGACAGAACGCAGACCGGCCACGTGCTGGGCAACCC...ACGTTCATTAAGTTCAACCATTACCATTACGAATCCCGTTTCCAGCTGGAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR CCA 90 bp GCCAGCTCTGAGGTATCAAAGGAGCTCCGAGTGCAAGTTGAAGACTTCAGCAAGCTGTATTCAACTTGCTaGACGTTCTGGAACTGCTTC +
Preference number: 4 (lower is better)
Translates to: ASSEVSKELRVQVEDFSKLYSTC*TFWNCF
Trigger: GAAGCAGTTCCAGAACGTCCAGCAAGTTGAATACAG...CTTGCTGAAGTCTTCAACTTGCACTCGGAGCTCCTTTGATACCTCAGAGCTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp ACTGCGTGTGTGGCTGAGCTACAAGTCTCCTGGAATGTAAACAATGTTGGTTTAACCCCTGAAGGATACTaGTCTGAGACTGGCAGGCTG +
Preference number: 4 (lower is better)
Translates to: TACVAELQVSWNVNNVGLTPEGY*SETGRL
Trigger: CAGCCTGCCAGTCTCAGACCAGTATCCTTCAGGGGT...TAAACCAACATTGTTTACATTCCAGGAGACTTGTAGCTCAGCCACACACGCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp AGAAACAGCTCGGCTTTCAAAAAGCTGTCAGCTCAGGTAGCACGCCTTGGTCTTTCAACGATATACAAATaGCAGGGGTTCCGAAGCCAC +
Preference number: 4 (lower is better)
Translates to: RNSSAFKKLSAQVARLGLSTIYK*QGFRSH
Trigger: GTGGCTTCGGAACCCCTGCCATTTGTATATCGTTGA...AAGACCAAGGCGTGCTACCTGAGCTGACAGCTTTTTGAAAGCCGAGCTGTTTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp GATGAGAAAGTTTCAGAACATGTATGTACATGGTTCAGAAACAGCTCGGCTTTCTTGAAGGGCACCCTCTaGAGCAGCAGGCCCTGGTAC +
Preference number: 4 (lower is better)
Translates to: DEKVSEHVCTWFRNSSAFLKGTL*SSRPWY
Trigger: GTACCAGGGCCTGCTGCTCCAGAGGGTGCCCTTCAA...GAAAGCCGAGCTGTTTCTGAACCATGTACATACATGTTCTGAAACTTTCTCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp CAGATCTCGGTGGCAGGTGGCTCTGCACAGTCCAGAGTGATAAAACAATCACAGAGAGTGCTTCCGGTATaGATTGCAGGCAGCTATAAT +
Preference number: 4 (lower is better)
Translates to: QISVAGGSAQSRVIKQSQRVLPV*IAGSYN
Trigger: ATTATAGCTGCCTGCAATCCATACCGGAAGCACTCT...CTGTGATTGTTTTATCACTCTGGACTGTGCAGAGCCACCTGCCACCGAGATCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp AGAATGAATATTAAGGATACTGCCTCTAACATATCAATAGCTGTGCTGAGCTGTCAGCCGGGCCCTGCATaGCGTCTGCCACGATGGTCT +
Preference number: 4 (lower is better)
Translates to: RMNIKDTASNISIAVLSCQPGPA*RLPRWS
Trigger: AGACCATCGTGGCAGACGCCATGCAGGGCCCGGCTG...ACAGCTCAGCACAGCTATTGATATGTTAGAGGCAGTATCCTTAATATTCATTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp AGGACTAGATATTCATACATGCGAGAGCACACTGAGACTGCATGTTTATTTGGCGACGCAAAGTACCCTTaGACTCGGTCCTGGACGAGG +
Preference number: 4 (lower is better)
Translates to: RTRYSYMREHTETACLFGDAKYP*TRSWTR
Trigger: CCTCGTCCAGGACCGAGTCCAAGGGTACTTTGCGTC...GCCAAATAAACATGCAGTCTCAGTGTGCTCTCGCATGTATGAATATCTAGTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp GATGAGAAAGTTTCAGAACATGTATGTACATGGTTCAGAAACAGCTCGGCTTTCTCTGTGAAGATGGCGTaGCGCTCCAGGTCTGCCGTG +
Preference number: 4 (lower is better)
Translates to: DEKVSEHVCTWFRNSSAFSVKMA*RSRSAV
Trigger: CACGGCAGACCTGGAGCGCCACGCCATCTTCACAGA...GAAAGCCGAGCTGTTTCTGAACCATGTACATACATGTTCTGAAACTTTCTCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp GATGAGAAAGTTTCAGAACATGTATGTACATGGTTCAGAAACAGCTCGGCTTTCAATGTGCCCGCCTCCTaGAGAGCGTCCTGGTTGCAG +
Preference number: 4 (lower is better)
Translates to: DEKVSEHVCTWFRNSSAFNVPAS*RASWLQ
Trigger: CTGCAACCAGGACGCTCTCCAGGAGGCGGGCACATT...GAAAGCCGAGCTGTTTCTGAACCATGTACATACATGTTCTGAAACTTTCTCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp TGCACTTTCCTGGCGCTTGTTTTTCCAGCTGGAAACGGGATTCGTAATGGTAATCCACGAAGAGTGCGGTaGAGAAAATCCGACTCCACT +
Preference number: 4 (lower is better)
Translates to: CTFLALVFPAGNGIRNGNPRRVR*RKSDST
Trigger: AGTGGAGTCGGATTTTCTCCACCGCACTCTTCGTGG...ATTACCATTACGAATCCCGTTTCCAGCTGGAAAAACAAGCGCCAGGAAAGTGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR CCA 90 bp ACTGCGTGTGTGGCTGAGCTACAAGTCTCCTGGAATGTAAACAATGTTGGTTTAATGGACCTGTGGCGATaGGGCAAAGATCGTGGGTTC +
Preference number: 4 (lower is better)
Translates to: TACVAELQVSWNVNNVGLMDLWR*GKDRGF
Trigger: GAACCCACGATCTTTGCCCCATCGCCACAGGTCCAT...TAAACCAACATTGTTTACATTCCAGGAGACTTGTAGCTCAGCCACACACGCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR CCA 90 bp GGGGAGTCTAAAACCAGCTGTAACCAAGTGTCTGTGTACGGGAACTGGTGTGGGAATCACCTAGATTCCTaGTCAGGGAACCAAGAAATG +
Preference number: 4 (lower is better)
Translates to: GESKTSCNQVSVYGNWCGNHLDS*SGNQEM
Trigger: CATTTCTTGGTTCCCTGACCAGGAATCTAGGTGATT...CCCACACCAGTTCCCGTACACAGACACTTGGTTACAGCTGGTTTTAGACTCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR TCA 90 bp GGCATACGAACAATATCTCAACAAAGAGTTAACGAAAAAGGGAAAGGAAAACCTCGTGGAAGAACACGGTaGCTCCTCCACCCGGGCTCA +
Preference number: 4 (lower is better)
Translates to: GIRTISQQRVNEKGKGKPRGRTR*LLHPGS
Trigger: TGAGCCCGGGTGGAGGAGTCACCGTGTTCTTCCACG...AGGTTTTCCTTTCCCTTTTTCGTTAACTCTTTGTTGAGATATTGTTCGTATGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000319921.4
CDS-3UTR TCA 90 bp TCGGCTTTCAAAAAGCTGTCAGCTCAGGTAGCACGCCTTGGTCTTGAATTCGGTATTGCTGTCCCATTTTaGCTCCCCAAATTCTTCTCC +
Preference number: 4 (lower is better)
Translates to: SAFKKLSAQVARLGLEFGIAVPF*LPKFFS
Trigger: GGAGAAGAATTTGGGGAGTCAAAATGGGACAGCAAT...ACCGAATTCAAGACCAAGGCGTGCTACCTGAGCTGACAGCTTTTTGAAAGCCGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp ACCACAGAAAGGACTAGATATTCATACATGCGAGAGCACACTGAGACTGCATGTTATTGCAGTAGGCAGTaGTCTGGGAGAGGGGTTCCT +
Preference number: 4 (lower is better)
Translates to: TTERTRYSYMREHTETACYCSRQ*SGRGVP
Trigger: AGGAACCCCTCTCCCAGATCACTGCCTACTGCAATA...ACATGCAGTCTCAGTGTGCTCTCGCATGTATGAATATCTAGTCCTTTCTGTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp ATTGTTTATGCCTGCAGAGGGGAGTGGGTGACTAGAGGGGAGGAGGATGATGGCCCAAAAGGCCACATATaGTATGATTCCATTCATATG +
Preference number: 4 (lower is better)
Translates to: IVYACRGEWVTRGEEDDGPKGHI*YDSIHM
Trigger: CATATGAATGGAATCATATCATATGTGGCCTTTTGG...GCCATCATCCTCCTCCCCTCTAGTCACCCACTCCCCTCTGCAGGCATAAACAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000319921.4
CDS-3UTR TCA 90 bp GGCATACGAACAATATCTCAACAAAGAGTTAACGAAAAAGGGAAAGGAAAACCTGGCTCACTGCTGCCTTaGCCTTCTGGGCCCAAGGGA +
Preference number: 4 (lower is better)
Translates to: GIRTISQQRVNEKGKGKPGSLLP*PSGPKG
Trigger: TCCCTTGGGCCCAGAAGGTCAAGGCAGCAGTGAGCC...AGGTTTTCCTTTCCCTTTTTCGTTAACTCTTTGTTGAGATATTGTTCGTATGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000319921.4
CDS-3UTR TCA 90 bp TTCCAAAGACCAGTCTTACCAAGTTTCAGATGTCTGGACTCCAAGTGGCAGTTCTTGTCTTTGACCAGATaGAAGCCGTCCCGAGGTTTG +
Preference number: 4 (lower is better)
Translates to: FQRPVLPSFRCLDSKWQFLSLTR*KPSRGL
Trigger: CAAACCTCGGGACGGCTTTCATCTGGTCAAAGACAA...GAACTGCCACTTGGAGTCCAGACATCTGAAACTTGGTAAGACTGGTCTTTGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR TCA 90 bp TCAAGTCCACGCCGCAGACGAGGAGAGAGGAGTCTTCTCTCCAAAGTCATCCAATTTTTATGTCTTGGCTaGGAACCACAGAAAGGACTA +
Preference number: 4 (lower is better)
Translates to: SSPRRRRGERSLLSKVIQFLCLG*EPQKGL
Trigger: TAGTCCTTTCTGTGGTTCTCAGCCAAGACATAAAAA...TTGGATGACTTTGGAGAGAAGACTCCTCTCTCCTCGTCTGCGGCGTGGACTTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp GAGTCCTGGACAAGCATTTTGTATTTTTGTAGTTCTCACTCCTTAGGCCCAATTCCCGGACCCAGCAGATaGACTCCTTTCTCAGGGACA +
Preference number: 4 (lower is better)
Translates to: ESWTSILYFCSSHSLGPIPGPSR*TPFSGT
Trigger: TGTCCCTGAGAAAGGAGTTCATCTGCTGGGTCCGGG...AATTGGGCCTAAGGAGTGAGAACTACAAAAATACAAAATGCTTGTCCAGGACTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp ACTGCGTGTGTGGCTGAGCTACAAGTCTCCTGGAATGTAAACAATGTTGGTTTATTCCTCATGAAACCCTaGGAGGCGCAGAGGACTTCT +
Preference number: 4 (lower is better)
Translates to: TACVAELQVSWNVNNVGLFLMKP*EAQRTS
Trigger: AGAAGTCCTCTGCGCCTCTCAGGGTTTCATGAGGAA...TAAACCAACATTGTTTACATTCCAGGAGACTTGTAGCTCAGCCACACACGCAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp AGAATGAATATTAAGGATACTGCCTCTAACATATCAATAGCTGTGCTGAGCTGTGGTGAACCCGACATTTaGCGCGGTGGGTCCCCAGAC +
Preference number: 4 (lower is better)
Translates to: RMNIKDTASNISIAVLSCGEPDI*RGGSPD
Trigger: GTCTGGGGACCCACCGCGTCAAATGTCGGGTTCACC...ACAGCTCAGCACAGCTATTGATATGTTAGAGGCAGTATCCTTAATATTCATTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp GGAATGCAGATCTCGGTGGCAGGTGGCTCTGCACAGTCCAGAGTGATAAAACAATGCCTCTTCTGGAAATaGTGTGCTTTGACATTGATG +
Preference number: 4 (lower is better)
Translates to: GMQISVAGGSAQSRVIKQCLFWK*CALTLM
Trigger: CATCAATGTCAAAGCACATCATTTCCAGAAGAGGCA...TTGTTTTATCACTCTGGACTGTGCAGAGCCACCTGCCACCGAGATCTGCATTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp TTCCAAAGACCAGTCTTACCAAGTTTCAGATGTCTGGACTCCAAGTGGCAGTTCGTCTCTGTCGATGAATaGTATCATGCTCGCCAGCAG +
Preference number: 4 (lower is better)
Translates to: FQRPVLPSFRCLDSKWQFVSVDE*YHARQQ
Trigger: CTGCTGGCGAGCATGATATCATTCATCGACAGAGAC...GAACTGCCACTTGGAGTCCAGACATCTGAAACTTGGTAAGACTGGTCTTTGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR TCA 90 bp TTTATGCGTGAGAAAACCAAGGCCCTGATGGTGTCCCTGGTCCAAGTCCAGTGCGCATGGTCAAGAGAATaGAATCCTTCAAGTAACACT +
Preference number: 4 (lower is better)
Translates to: FMREKTKALMVSLVQVQCAWSRE*NPSSNT
Trigger: AGTGTTACTTGAAGGATTTCATTCTCTTGACCATGC...GCACTGGACTTGGACCAGGGACACCATCAGGGCCTTGGTTTTCTCACGCATAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp GATGAGAAAGTTTCAGAACATGTATGTACATGGTTCAGAAACAGCTCGGCTTTCGCTCATCGGAGCAGATaGGCTCCAGCGGCATGGAAA +
Preference number: 4 (lower is better)
Translates to: DEKVSEHVCTWFRNSSAFAHRSR*APAAWK
Trigger: TTTCCATGCCGCTGGAGCTCATCTGCTCCGATGAGC...GAAAGCCGAGCTGTTTCTGAACCATGTACATACATGTTCTGAAACTTTCTCATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp AGGACTAGATATTCATACATGCGAGAGCACACTGAGACTGCATGTTTATTTGGCGCGGAGCGTTGTCCTTaGAGCAAATGGTGGACACCA +
Preference number: 4 (lower is better)
Translates to: RTRYSYMREHTETACLFGAERCP*SKWWTP
Trigger: TGGTGTCCACCATTTGCTTCAAGGACAACGCTCCGC...GCCAAATAAACATGCAGTCTCAGTGTGCTCTCGCATGTATGAATATCTAGTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp ACCACAGAAAGGACTAGATATTCATACATGCGAGAGCACACTGAGACTGCATGTCCACCGTCTCACATGTaGAGGCAGAGCCTGTTTTCT +
Preference number: 4 (lower is better)
Translates to: TTERTRYSYMREHTETACPPSHM*RQSLFS
Trigger: AGAAAACAGGCTCTGCCTTCACATGTGAGACGGTGG...ACATGCAGTCTCAGTGTGCTCTCGCATGTATGAATATCTAGTCCTTTCTGTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR TCA 90 bp TGCTGGCCAGTCTATCTTACACAAAGTTTTAAGTTTTCCTGGTGTCATAGTACTCCCCGCTGTGTCCAGTaGAGTCATTTCAGGCAGGGC +
Preference number: 4 (lower is better)
Translates to: CWPVYLTQSFKFSWCHSTPRCVQ*SHFRQG
Trigger: GCCCTGCCTGAAATGACTTCACTGGACACAGCGGGG...AGTACTATGACACCAGGAAAACTTAAAACTTTGTGTAAGATAGACTGGCCAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR TCA 90 bp ACCACAGAAAGGACTAGATATTCATACATGCGAGAGCACACTGAGACTGCATGTACTGAGCTCCCCGAGTaGGCAATTCCTGTCCCTTTT +
Preference number: 4 (lower is better)
Translates to: TTERTRYSYMREHTETACTELPE*AIPVPF
Trigger: AAAAGGGACAGGAATTGCTCACTCGGGGAGCTCAGT...ACATGCAGTCTCAGTGTGCTCTCGCATGTATGAATATCTAGTCCTTTCTGTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR GCA 90 bp CAGATCTCGGTGGCAGGTGGCTCTGCACAGTCCAGAGTGATAAAACAATCACAGTCCTTTTCTTCTTTTTaGTTTCTTGGACGGTCCAGG +
Preference number: 4 (lower is better)
Translates to: QISVAGGSAQSRVIKQSQSFSSF*FLGRSR
Trigger: CCTGGACCGTCCAAGAAAGCAAAAAGAAGAAAAGGA...CTGTGATTGTTTTATCACTCTGGACTGTGCAGAGCCACCTGCCACCGAGATCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR GCA 90 bp AGGAGGATGATGGCTAAAGGGGCCGGGTTTCTCTTTGAAGTGATGAAAATGCTCGTTTTTCACAGCAGCTaGACTTCTGTTCTTCCCCTC +
Preference number: 4 (lower is better)
Translates to: RRMMAKGAGFLFEVMKMLVFHSS*TSVLPL
Trigger: GAGGGGAAGAACAGAAGTGCAGCTGCTGTGAAAAAC...GAGCATTTTCATCACTTCAAAGAGAAACCCGGCCCCTTTAGCCATCATCCTCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000319921.4
CDS-3UTR GCA 90 bp ATGGCATACGAACAATATCTCAACAAAGAGTTAACGAAAAAGGGAAAGGAAAACAGCCCGTGTGACTTGTaGCACACGCGCACGGCCGTG +
Preference number: 4 (lower is better)
Translates to: MAYEQYLNKELTKKGKENSPCDL*HTRTAV
Trigger: CACGGCCGTGCGCGTGTGGCACAAGTCACACGGGCT...GTTTTCCTTTCCCTTTTTCGTTAACTCTTTGTTGAGATATTGTTCGTATGCCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000319921.4
CDS-3UTR GCA 90 bp AGAAACAGCTCGGCTTTCAAAAAGCTGTCAGCTCAGGTAGCACGCCTTGGTCTTGCTTGCTGGAGAATATaGCTTAAGGAAACGACCTTC +
Preference number: 4 (lower is better)
Translates to: RNSSAFKKLSAQVARLGLACWRI*LKETTF
Trigger: GAAGGTCGTTTCCTTAAGGCATATTCTCCAGCAAGC...AAGACCAAGGCGTGCTACCTGAGCTGACAGCTTTTTGAAAGCCGAGCTGTTTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp ACCACAGAAAGGACTAGATATTCATACATGCGAGAGCACACTGAGACTGCATGTGCGCATGGCAGTCAATaGAGATGCTCTGTTCCATCG +
Preference number: 4 (lower is better)
Translates to: TTERTRYSYMREHTETACAHGSQ*RCSVPS
Trigger: CGATGGAACAGAGCATCTGCATTGACTGCCATGCGC...ACATGCAGTCTCAGTGTGCTCTCGCATGTATGAATATCTAGTCCTTTCTGTGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp TTTCAGGCAGGGCATGGGGGACTCCTTCTGAGGCAGAGGTGTAAGCGTTTCAGTAAGGCACTCACAAAATaGCCTGATTTTTCTTGTCTT +
Preference number: 4 (lower is better)
Translates to: FQAGHGGLLLRQRCKRFSKALTK*PDFSCL
Trigger: AAGACAAGAAAAATCAGGGCATTTTGTGAGTGCCTT...ACTGAAACGCTTACACCTCTGCCTCAGAAGGAGTCCCCCATGCCCTGCCTGAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR GCA 90 bp TCAGCTCCACTGTGGAGTCGCCAGGATGCTGTCATTTTGTCCAGAGGAAAAGTCCTAGATATTCATACATaGGAGAGCACACTGAGACTG +
Preference number: 4 (lower is better)
Translates to: SAPLWSRQDAVILSRGKVLDIHT*ESTLRL
Trigger: CAGTCTCAGTGTGCTCTCGCATGTATGAATATCTAG...GACTTTTCCTCTGGACAAAATGACAGCATCCTGGCGACTCCACAGTGGAGCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR GCA 90 bp TGCTGGCCAGTCTATCTTACACAAAGTTTTAAGTTTTCCTGGTGTCATAGTACTGTGACTCCTCGTGGCTaGCAGGGCTCTCAGGAAGGA +
Preference number: 4 (lower is better)
Translates to: CWPVYLTQSFKFSWCHSTVTPRG*QGSQEG
Trigger: TCCTTCCTGAGAGCCCTGGCAGCCACGAGGAGTCAC...AGTACTATGACACCAGGAAAACTTAAAACTTTGTGTAAGATAGACTGGCCAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR GCA 90 bp GCCAGCTCTGAGGTATCAAAGGAGCTCCGAGTGCAAGTTGAAGACTTCAGCAAGTGTTACGATCCTTCTTaGCAGACATCAGCATCAACT +
Preference number: 4 (lower is better)
Translates to: ASSEVSKELRVQVEDFSKCYDPS*QTSAST
Trigger: AGTTGATGCTGATGTCTGGCAAGAAGGATCGTAACA...CTTGCTGAAGTCTTCAACTTGCACTCGGAGCTCCTTTGATACCTCAGAGCTGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp ACCACAGAAAGGACTAGATATTCATACATGCGAGAGCACACTGAGACTGCATGTATATTCCCAGCAGAGTaGAGGTCGATGAAGGCCTGG +
Preference number: 4 (lower is better)
Translates to: TTERTRYSYMREHTETACIFPAE*RSMKAW
Trigger: CCAGGCCTTCATCGACCTGCACTCTGCTGGGAATAT...ACATGCAGTCTCAGTGTGCTCTCGCATGTATGAATATCTAGTCCTTTCTGTGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp AGGACTAGATATTCATACATGCGAGAGCACACTGAGACTGCATGTTTATTTGGCAGACTTTCCAACACCTaGTCGCTCCGAGGCCACGAT +
Preference number: 4 (lower is better)
Translates to: RTRYSYMREHTETACLFGRLSNT*SLRGHD
Trigger: ATCGTGGCCTCGGAGCGAGCAGGTGTTGGAAAGTCT...GCCAAATAAACATGCAGTCTCAGTGTGCTCTCGCATGTATGAATATCTAGTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp GATGAGAAAGTTTCAGAACATGTATGTACATGGTTCAGAAACAGCTCGGCTTTCACCCGGTATACCAGCTaGCTCAGAGGAATGGAGCCC +
Preference number: 4 (lower is better)
Translates to: DEKVSEHVCTWFRNSSAFTRYTS*LRGMEP
Trigger: GGGCTCCATTCCTCTGAGGCAGCTGGTATACCGGGT...GAAAGCCGAGCTGTTTCTGAACCATGTACATACATGTTCTGAAACTTTCTCATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp AGGACTAGATATTCATACATGCGAGAGCACACTGAGACTGCATGTTTATTTGGCGGACCTGCTTCAGGCTaGGGAAGAGATCTGAGTAGG +
Preference number: 4 (lower is better)
Translates to: RTRYSYMREHTETACLFGGPASG*GRDLSR
Trigger: CCTACTCAGATCTCTTCCGCAGCCTGAAGCAGGTCC...GCCAAATAAACATGCAGTCTCAGTGTGCTCTCGCATGTATGAATATCTAGTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp GATGAGAAAGTTTCAGAACATGTATGTACATGGTTCAGAAACAGCTCGGCTTTCGACACCAGGTGGACCTaGTTCAGGCTGCGGAAGAGA +
Preference number: 4 (lower is better)
Translates to: DEKVSEHVCTWFRNSSAFDTRWT*FRLRKR
Trigger: TCTCTTCCGCAGCCTGAAGCAGGTCCACCTGGTGTC...GAAAGCCGAGCTGTTTCTGAACCATGTACATACATGTTCTGAAACTTTCTCATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp TCACAATTTCAAAATGTCAGATCAGAAGAATCTTTGGCGATTAATCCACTCTCCGGGTGGAGTGCGGGCTaGACTGGAAGGACACCAGGT +
Preference number: 4 (lower is better)
Translates to: SQFQNVRSEESLAINPLSGWSAG*TGRTPG
Trigger: ACCTGGTGTCCTTCCAGTGCAGCCCGCACTCCACCC...GGAGAGTGGATTAATCGCCAAAGATTCTTCTGATCTGACATTTTGAAATTGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp ACCACAGAAAGGACTAGATATTCATACATGCGAGAGCACACTGAGACTGCATGTCTGTCTCGTTGGGGCTaGCACGTGACACAAAAATGC +
Preference number: 4 (lower is better)
Translates to: TTERTRYSYMREHTETACLSRWG*HVTQKC
Trigger: GCATTTTTGTGTCACGTGGCAGCCCCAACGAGACAG...ACATGCAGTCTCAGTGTGCTCTCGCATGTATGAATATCTAGTCCTTTCTGTGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp TGCACTTTCCTGGCGCTTGTTTTTCCAGCTGGAAACGGGATTCGTAATGGTAATTGCCGTGTGCAGGTGTaGCTGAAGGAAATCTGCAAA +
Preference number: 4 (lower is better)
Translates to: CTFLALVFPAGNGIRNGNCRVQV*LKEICK
Trigger: TTTGCAGATTTCCTTCAGGCACACCTGCACACGGCA...ATTACCATTACGAATCCCGTTTCCAGCTGGAAAAACAAGCGCCAGGAAAGTGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR GCA 90 bp GAGTCCTGGACAAGCATTTTGTATTTTTGTAGTTCTCACTCCTTAGGCCCAATTGTTGCAGGCTTCCCTTaGCAACCACTCCAGAGGGTG +
Preference number: 4 (lower is better)
Translates to: ESWTSILYFCSSHSLGPIVAGFP*QPLQRV
Trigger: CACCCTCTGGAGTGGTTGGCAAGGGAAGCCTGCAAC...AATTGGGCCTAAGGAGTGAGAACTACAAAAATACAAAATGCTTGTCCAGGACTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp TTTTTCCAGCTGGAAACGGGATTCGTAATGGTAATGGTTGAACTTAATGAACGTGGAGAGCGTCCTGGTTaGAGGCTTCCCTTGCCAACC +
Preference number: 4 (lower is better)
Translates to: FFQLETGFVMVMVELNERGERPG*RLPLPT
Trigger: GGTTGGCAAGGGAAGCCTGCAACCAGGACGCTCTCC...ACGTTCATTAAGTTCAACCATTACCATTACGAATCCCGTTTCCAGCTGGAAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR GCA 90 bp AGGACTAGATATTCATACATGCGAGAGCACACTGAGACTGCATGTTTATTTGGCGGCCATTGCGGCAAATaGGTCCAGGGTCATCTCACA +
Preference number: 4 (lower is better)
Translates to: RTRYSYMREHTETACLFGGHCGK*VQGHLT
Trigger: TGTGAGATGACCCTGGACGCATTTGCCGCAATGGCC...GCCAAATAAACATGCAGTCTCAGTGTGCTCTCGCATGTATGAATATCTAGTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp ACCACAGAAAGGACTAGATATTCATACATGCGAGAGCACACTGAGACTGCATGTTTGTCAGCATCTCCGTaGAGGCCATTGCGGCAAATG +
Preference number: 4 (lower is better)
Translates to: TTERTRYSYMREHTETACLSASP*RPLRQM
Trigger: CATTTGCCGCAATGGCCTGCACGGAGATGCTGACAA...ACATGCAGTCTCAGTGTGCTCTCGCATGTATGAATATCTAGTCCTTTCTGTGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp ACTGCGTGTGTGGCTGAGCTACAAGTCTCCTGGAATGTAAACAATGTTGGTTTATCTAGTAAGAAGACGTaGTCGGTCACCAGCCCCTGT +
Preference number: 4 (lower is better)
Translates to: TACVAELQVSWNVNNVGLSSKKT*SVTSPC
Trigger: ACAGGGGCTGGTGACCGAGCACGTCTTCTTACTAGA...TAAACCAACATTGTTTACATTCCAGGAGACTTGTAGCTCAGCCACACACGCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp ACTGCGTGTGTGGCTGAGCTACAAGTCTCCTGGAATGTAAACAATGTTGGTTTATGCTGGCTGTCTCCTTaGATTCACAGAGAGTGCGCA +
Preference number: 4 (lower is better)
Translates to: TACVAELQVSWNVNNVGLCWLSP*IHRECA
Trigger: TGCGCACTCTCTGTGAATGCAAGGAGACAGCCAGCA...TAAACCAACATTGTTTACATTCCAGGAGACTTGTAGCTCAGCCACACACGCAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp ACTGCGTGTGTGGCTGAGCTACAAGTCTCCTGGAATGTAAACAATGTTGGTTTACTACGAAGAAACTGTTaGACATCTGCCGGAAGCGGG +
Preference number: 4 (lower is better)
Translates to: TACVAELQVSWNVNNVGLLRRNC*TSAGSG
Trigger: CCCGCTTCCGGCAGATGTGCAACAGTTTCTTCGTAG...TAAACCAACATTGTTTACATTCCAGGAGACTTGTAGCTCAGCCACACACGCAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp TGCTGGCCAGTCTATCTTACACAAAGTTTTAAGTTTTCCTGGTGTCATAGTACTCTGTACCCCGTTAGCTaGAGCCCCGCTGTGTCCAGT +
Preference number: 4 (lower is better)
Translates to: CWPVYLTQSFKFSWCHSTLYPVS*SPAVSS
Trigger: ACTGGACACAGCGGGGCTGCAGCTAACGGGGTACAG...AGTACTATGACACCAGGAAAACTTAAAACTTTGTGTAAGATAGACTGGCCAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR GCA 90 bp GAGTCCTGGACAAGCATTTTGTATTTTTGTAGTTCTCACTCCTTAGGCCCAATTGCTTTGGCCCCAGGTTaGTTTCGCATACACCCCCAC +
Preference number: 4 (lower is better)
Translates to: ESWTSILYFCSSHSLGPIALAPG*FRIHPH
Trigger: GTGGGGGTGTATGCGAAAGCAACCTGGGGCCAAAGC...AATTGGGCCTAAGGAGTGAGAACTACAAAAATACAAAATGCTTGTCCAGGACTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR CCA 90 bp GAAAGTTTCAGAACATGTATGTACATGGTTCAGAAACAGCTCGGCTTTCAAAAACGGTCCAGGAGGCTTTaGAACAGGGCTCCTCGGGGT +
Preference number: 4 (lower is better)
Translates to: ESFRTCMYMVQKQLGFQKRSRRL*NRAPRG
Trigger: ACCCCGAGGAGCCCTGTTCCAAAGCCTCCTGGACCG...TTTTTGAAAGCCGAGCTGTTTCTGAACCATGTACATACATGTTCTGAAACTTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp TTCCAAAGACCAGTCTTACCAAGTTTCAGATGTCTGGACTCCAAGTGGCAGTTCGGCCCGTCTGTGATGTaGTTCATGACTTTCTGGAGT +
Preference number: 4 (lower is better)
Translates to: FQRPVLPSFRCLDSKWQFGPSVM*FMTFWS
Trigger: ACTCCAGAAAGTCATGAACCACATCACAGACGGGCC...GAACTGCCACTTGGAGTCCAGACATCTGAAACTTGGTAAGACTGGTCTTTGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR CCA 90 bp AGGAGGATGATGGCTAAAGGGGCCGGGTTTCTCTTTGAAGTGATGAAAATGCTCTTGTGCTGCTGCAGATaGCTTCATGCAGTTTCAGAC +
Preference number: 4 (lower is better)
Translates to: RRMMAKGAGFLFEVMKMLLCCCR*LHAVSD
Trigger: GTCTGAAACTGCATGAAGCCATCTGCAGCAGCACAA...GAGCATTTTCATCACTTCAAAGAGAAACCCGGCCCCTTTAGCCATCATCCTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319921.4
CDS-3UTR CCA 90 bp ATTGTTTATGCCTGCAGAGGGGAGTGGGTGACTAGAGGGGAGGAGGATGATGGCAATCCAAAACACTTCTaGTCTCAAGCATTTTGGGTA +
Preference number: 4 (lower is better)
Translates to: IVYACRGEWVTRGEEDDGNPKHF*SQAFWV
Trigger: TACCCAAAATGCTTGAGACCAGAAGTGTTTTGGATT...GCCATCATCCTCCTCCCCTCTAGTCACCCACTCCCCTCTGCAGGCATAAACAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000319921.4
CDS-3UTR CCA 90 bp GGGGAGTCTAAAACCAGCTGTAACCAAGTGTCTGTGTACGGGAACTGGTGTGGGTCAGTTCATCATTTCTaGAGTAAGCACTGGTCTTCT +
Preference number: 4 (lower is better)
Translates to: GESKTSCNQVSVYGNWCGSVHHF*SKHWSS
Trigger: AGAAGACCAGTGCTTACTCCAGAAATGATGAACTGA...CCCACACCAGTTCCCGTACACAGACACTTGGTTACAGCTGGTTTTAGACTCCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR CCA 90 bp AGAATGAATATTAAGGATACTGCCTCTAACATATCAATAGCTGTGCTGAGCTGTCTCCTTGGCCATCTCTaGGCCTCCCTCAGGCTCCGA +
Preference number: 4 (lower is better)
Translates to: RMNIKDTASNISIAVLSCLLGHL*ASLRLR
Trigger: TCGGAGCCTGAGGGAGGCCCAGAGATGGCCAAGGAG...ACAGCTCAGCACAGCTATTGATATGTTAGAGGCAGTATCCTTAATATTCATTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp TTTGCTATTAATAGTTGTGTCAGCATCTTTCTTAGACTGTTTTCCAGCAGGGTCAGGTACCTATCCATCTaGCCTGGGTGGTCCTGCCGC +
Preference number: 4 (lower is better)
Translates to: FAINSCVSIFLRLFSSRVRYLSI*PGWSCR
Trigger: GCGGCAGGACCACCCAGGCCAGATGGATAGGTACCT...GACCCTGCTGGAAAACAGTCTAAGAAAGATGCTGACACAACTATTAATAGCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573038.1
CDS-3UTR CCA 90 bp ACCACAGAAAGGACTAGATATTCATACATGCGAGAGCACACTGAGACTGCATGTAGTCTTAATGCCCAGTaGCTTGCACTCGAGGACAGC +
Preference number: 4 (lower is better)
Translates to: TTERTRYSYMREHTETACSLNAQ*LALEDS
Trigger: GCTGTCCTCGAGTGCAAGCCACTGGGCATTAAGACT...ACATGCAGTCTCAGTGTGCTCTCGCATGTATGAATATCTAGTCCTTTCTGTGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp TCGGCTTTCAAAAAGCTGTCAGCTCAGGTAGCACGCCTTGGTCTTGAATTCGGTTGGAGGCTTGCATTGTaGGATCTGTACAAAATAGCC +
Preference number: 4 (lower is better)
Translates to: SAFKKLSAQVARLGLEFGWRLAL*DLYKIA
Trigger: GGCTATTTTGTACAGATCCCACAATGCAAGCCTCCA...ACCGAATTCAAGACCAAGGCGTGCTACCTGAGCTGACAGCTTTTTGAAAGCCGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp TTTTTCCAGCTGGAAACGGGATTCGTAATGGTAATGGTTGAACTTAATGAACGTAAGGAGGAAGACCACTaGGGGCAGCCCTCGGTCACA +
Preference number: 4 (lower is better)
Translates to: FFQLETGFVMVMVELNERKEEDH*GQPSVT
Trigger: TGTGACCGAGGGCTGCCCCCAGTGGTCTTCCTCCTT...ACGTTCATTAAGTTCAACCATTACCATTACGAATCCCGTTTCCAGCTGGAAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR CCA 90 bp TTTATGCGTGAGAAAACCAAGGCCCTGATGGTGTCCCTGGTCCAAGTCCAGTGCTGTTCCACAATGTGCTaGAGGTACTCAACTGTAATT +
Preference number: 4 (lower is better)
Translates to: FMREKTKALMVSLVQVQCCSTMC*RYSTVI
Trigger: AATTACAGTTGAGTACCTCCAGCACATTGTGGAACA...GCACTGGACTTGGACCAGGGACACCATCAGGGCCTTGGTTTTCTCACGCATAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp TGCACTTTCCTGGCGCTTGTTTTTCCAGCTGGAAACGGGATTCGTAATGGTAATACTGATTTCCCCAAATaGCTCTTTGTGCAGCCGCAG +
Preference number: 4 (lower is better)
Translates to: CTFLALVFPAGNGIRNGNTDFPK*LFVQPQ
Trigger: CTGCGGCTGCACAAAGAGCCATTTGGGGAAATCAGT...ATTACCATTACGAATCCCGTTTCCAGCTGGAAAAACAAGCGCCAGGAAAGTGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR CCA 90 bp CACGCCGCAGACGAGGAGAGAGGAGTCTTCTCTCCAAAGTCATCCAAAGATAGCGAGCTACAAGTCTCCTaGAATGTAAACAATGTTGGT +
Preference number: 4 (lower is better)
Translates to: HAADEERGVFSPKSSKDSELQVS*NVNNVG
Trigger: ACCAACATTGTTTACATTCCAGGAGACTTGTAGCTC...GCTATCTTTGGATGACTTTGGAGAGAAGACTCCTCTCTCCTCGTCTGCGGCGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp TCAAGTCCACGCCGCAGACGAGGAGAGAGGAGTCTTCTCTCCAAAGTCATCCAAGAGCTACAAGTCTCCTaGAATGTAAACAATGTTGGT +
Preference number: 4 (lower is better)
Translates to: SSPRRRRGERSLLSKVIQELQVS*NVNNVG
Trigger: ACCAACATTGTTTACATTCCAGGAGACTTGTAGCTC...TTGGATGACTTTGGAGAGAAGACTCCTCTCTCCTCGTCTGCGGCGTGGACTTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp ACCACAGAAAGGACTAGATATTCATACATGCGAGAGCACACTGAGACTGCATGTCCCTTCATCAGACACTaGTGGCACCATGACAGTGAG +
Preference number: 4 (lower is better)
Translates to: TTERTRYSYMREHTETACPFIRH*WHHDSE
Trigger: CTCACTGTCATGGTGCCACCAGTGTCTGATGAAGGG...ACATGCAGTCTCAGTGTGCTCTCGCATGTATGAATATCTAGTCCTTTCTGTGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp AGGACTAGATATTCATACATGCGAGAGCACACTGAGACTGCATGTTTATTTGGCGAATGCAGATCTCGGTaGCAGGTGGCTCTGCACAGT +
Preference number: 4 (lower is better)
Translates to: RTRYSYMREHTETACLFGECRSR*QVALHS
Trigger: ACTGTGCAGAGCCACCTGCCACCGAGATCTGCATTC...GCCAAATAAACATGCAGTCTCAGTGTGCTCTCGCATGTATGAATATCTAGTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp AGGACTAGATATTCATACATGCGAGAGCACACTGAGACTGCATGTTTATTTGGCTCCCGCCAGAAGAGCTaGAAGATGTGGCTGTCTCTG +
Preference number: 4 (lower is better)
Translates to: RTRYSYMREHTETACLFGSRQKS*KMWLSL
Trigger: CAGAGACAGCCACATCTTCCAGCTCTTCTGGCGGGA...GCCAAATAAACATGCAGTCTCAGTGTGCTCTCGCATGTATGAATATCTAGTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp AGGACTAGATATTCATACATGCGAGAGCACACTGAGACTGCATGTTTATTTGGCAACTCTGCGGCTTCCTaGTCCTCCTTAGGCTCACTC +
Preference number: 4 (lower is better)
Translates to: RTRYSYMREHTETACLFGNSAAS*SSLGSL
Trigger: GAGTGAGCCTAAGGAGGACCAGGAAGCCGCAGAGTT...GCCAAATAAACATGCAGTCTCAGTGTGCTCTCGCATGTATGAATATCTAGTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp ACCACAGAAAGGACTAGATATTCATACATGCGAGAGCACACTGAGACTGCATGTGTGCAGAACCGTGTCTaGGGAAATCTTTTGGCCACC +
Preference number: 4 (lower is better)
Translates to: TTERTRYSYMREHTETACVQNRV*GNLLAT
Trigger: GGTGGCCAAAAGATTTCCCCAGACACGGTTCTGCAC...ACATGCAGTCTCAGTGTGCTCTCGCATGTATGAATATCTAGTCCTTTCTGTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp AGAATGAATATTAAGGATACTGCCTCTAACATATCAATAGCTGTGCTGAGCTGTTCCTCATGCGGTACCTaGCGGCCTCACTCCCACACC +
Preference number: 4 (lower is better)
Translates to: RMNIKDTASNISIAVLSCSSCGT*RPHSHT
Trigger: GGTGTGGGAGTGAGGCCGCCAGGTACCGCATGAGGA...ACAGCTCAGCACAGCTATTGATATGTTAGAGGCAGTATCCTTAATATTCATTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp GAGTCCTGGACAAGCATTTTGTATTTTTGTAGTTCTCACTCCTTAGGCCCAATTACGAAGACCTTGTGCTaGCTGAAGGCAGAGGGGAGG +
Preference number: 4 (lower is better)
Translates to: ESWTSILYFCSSHSLGPITKTLC*LKAEGR
Trigger: CCTCCCCTCTGCCTTCAGCCAGCACAAGGTCTTCGT...AATTGGGCCTAAGGAGTGAGAACTACAAAAATACAAAATGCTTGTCCAGGACTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp ATCAAGTCCACGCCGCAGACGAGGAGAGAGGAGTCTTCTCTCCAAAGTCATCCAAATGTCATGGTTGTGTaGTCGTCATTGAAGAAAACG +
Preference number: 4 (lower is better)
Translates to: IKSTPQTRREESSLQSHPNVMVV*SSLKKT
Trigger: CGTTTTCTTCAATGACGACCACACAACCATGACATT...TGGATGACTTTGGAGAGAAGACTCCTCTCTCCTCGTCTGCGGCGTGGACTTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp CACGCCGCAGACGAGGAGAGAGGAGTCTTCTCTCCAAAGTCATCCAAAGATAGCAATGTCATGGTTGTGTaGTCGTCATTGAAGAAAACG +
Preference number: 4 (lower is better)
Translates to: HAADEERGVFSPKSSKDSNVMVV*SSLKKT
Trigger: CGTTTTCTTCAATGACGACCACACAACCATGACATT...GCTATCTTTGGATGACTTTGGAGAGAAGACTCCTCTCTCCTCGTCTGCGGCGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp CAATTTCAAAATGTCAGATCAGAAGAATCTTTGGCGATTAATCCACTCTCCATTTCGGGGTCGGTGGCCTaGGGGATCCCTAAGGTCAGG +
Preference number: 4 (lower is better)
Translates to: QFQNVRSEESLAINPLSISGSVA*GIPKVR
Trigger: CCTGACCTTAGGGATCCCCCAGGCCACCGACCCCGA...AATGGAGAGTGGATTAATCGCCAAAGATTCTTCTGATCTGACATTTTGAAATTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp TCGGCTTTCAAAAAGCTGTCAGCTCAGGTAGCACGCCTTGGTCTTGAATTCGGTGATGTTGGTCCTTATTaGCGAAGGCCACATTTTCAG +
Preference number: 4 (lower is better)
Translates to: SAFKKLSAQVARLGLEFGDVGPY*RRPHFQ
Trigger: CTGAAAATGTGGCCTTCGCCAATAAGGACCAACATC...ACCGAATTCAAGACCAAGGCGTGCTACCTGAGCTGACAGCTTTTTGAAAGCCGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp GAGTCCTGGACAAGCATTTTGTATTTTTGTAGTTCTCACTCCTTAGGCCCAATTCTGCCACGATGGTCTTaGCGAGAGACTTGGAGCTGC +
Preference number: 4 (lower is better)
Translates to: ESWTSILYFCSSHSLGPILPRWS*RETWSC
Trigger: GCAGCTCCAAGTCTCTCGCCAAGACCATCGTGGCAG...AATTGGGCCTAAGGAGTGAGAACTACAAAAATACAAAATGCTTGTCCAGGACTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp GATGAGAAAGTTTCAGAACATGTATGTACATGGTTCAGAAACAGCTCGGCTTTCCTGCCACGATGGTCTTaGCGAGAGACTTGGAGCTGC +
Preference number: 4 (lower is better)
Translates to: DEKVSEHVCTWFRNSSAFLPRWS*RETWSC
Trigger: GCAGCTCCAAGTCTCTCGCCAAGACCATCGTGGCAG...GAAAGCCGAGCTGTTTCTGAACCATGTACATACATGTTCTGAAACTTTCTCATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp CAATTTCAAAATGTCAGATCAGAAGAATCTTTGGCGATTAATCCACTCTCCATTCAGCCGGGCCCTGCATaGCGTCTGCCACGATGGTCT +
Preference number: 4 (lower is better)
Translates to: QFQNVRSEESLAINPLSIQPGPA*RLPRWS
Trigger: AGACCATCGTGGCAGACGCCATGCAGGGCCCGGCTG...AATGGAGAGTGGATTAATCGCCAAAGATTCTTCTGATCTGACATTTTGAAATTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp AGAATGAATATTAAGGATACTGCCTCTAACATATCAATAGCTGTGCTGAGCTGTGAGTGCGGGCTGCACTaGAAGGACACCAGGTGGACC +
Preference number: 4 (lower is better)
Translates to: RMNIKDTASNISIAVLSCECGLH*KDTRWT
Trigger: GGTCCACCTGGTGTCCTTCCAGTGCAGCCCGCACTC...ACAGCTCAGCACAGCTATTGATATGTTAGAGGCAGTATCCTTAATATTCATTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp AGAATGAATATTAAGGATACTGCCTCTAACATATCAATAGCTGTGCTGAGCTGTGCTGATGATGCCCTGTaGGGTGGAGTGCGGGCTGCA +
Preference number: 4 (lower is better)
Translates to: RMNIKDTASNISIAVLSCADDAL*GGVRAA
Trigger: TGCAGCCCGCACTCCACCCCACAGGGCATCATCAGC...ACAGCTCAGCACAGCTATTGATATGTTAGAGGCAGTATCCTTAATATTCATTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp GAGTCCTGGACAAGCATTTTGTATTTTTGTAGTTCTCACTCCTTAGGCCCAATTCCTTGGACTCGGTCCTaGACGAGGATGTCTGAGGAG +
Preference number: 4 (lower is better)
Translates to: ESWTSILYFCSSHSLGPIPWTRS*TRMSEE
Trigger: CTCCTCAGACATCCTCGTCCAGGACCGAGTCCAAGG...AATTGGGCCTAAGGAGTGAGAACTACAAAAATACAAAATGCTTGTCCAGGACTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp ACTGCGTGTGTGGCTGAGCTACAAGTCTCCTGGAATGTAAACAATGTTGGTTTAATAATCTCCGGCTGCTaGTCCCCCTCGAAGAATGTC +
Preference number: 4 (lower is better)
Translates to: TACVAELQVSWNVNNVGLIISGC*SPSKNV
Trigger: GACATTCTTCGAGGGGGACCAGCAGCCGGAGATTAT...TAAACCAACATTGTTTACATTCCAGGAGACTTGTAGCTCAGCCACACACGCAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp GCCAGCTCTGAGGTATCAAAGGAGCTCCGAGTGCAAGTTGAAGACTTCAGCAAGTGTACTCTTGGTCCTTaGGGAAACCAGAACCAAAAA +
Preference number: 4 (lower is better)
Translates to: ASSEVSKELRVQVEDFSKCTLGP*GNQNQK
Trigger: TTTTTGGTTCTGGTTTCCCCAAGGACCAAGAGTACA...CTTGCTGAAGTCTTCAACTTGCACTCGGAGCTCCTTTGATACCTCAGAGCTGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp AGAATGAATATTAAGGATACTGCCTCTAACATATCAATAGCTGTGCTGAGCTGTCCGGGCGCGAACAGCTaGCTGATGGTGACATGCTGC +
Preference number: 4 (lower is better)
Translates to: RMNIKDTASNISIAVLSCPGANS*LMVTCC
Trigger: GCAGCATGTCACCATCAGCCAGCTGTTCGCGCCCGG...ACAGCTCAGCACAGCTATTGATATGTTAGAGGCAGTATCCTTAATATTCATTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp TGCTGGCCAGTCTATCTTACACAAAGTTTTAAGTTTTCCTGGTGTCATAGTACTGCCACGCCTGGGGACTaGGCTTCAGGGTGTTTCTTG +
Preference number: 4 (lower is better)
Translates to: CWPVYLTQSFKFSWCHSTATPGD*ASGCFL
Trigger: CAAGAAACACCCTGAAGCCCAGTCCCCAGGCGTGGC...AGTACTATGACACCAGGAAAACTTAAAACTTTGTGTAAGATAGACTGGCCAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR CCA 90 bp TTCCAAAGACCAGTCTTACCAAGTTTCAGATGTCTGGACTCCAAGTGGCAGTTCCGCTTGGGAAACAGCTaGAGAGAATTCGTCTGGCAA +
Preference number: 4 (lower is better)
Translates to: FQRPVLPSFRCLDSKWQFRLGNS*REFVWQ
Trigger: TTGCCAGACGAATTCTCTCCAGCTGTTTCCCAAGCG...GAACTGCCACTTGGAGTCCAGACATCTGAAACTTGGTAAGACTGGTCTTTGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR TCA 90 bp ATGGCATACGAACAATATCTCAACAAAGAGTTAACGAAAAAGGGAAAGGAAAACGGCAGGGCTGTGTCCTaGGGCCACGGGTTTGAAAGC +
Preference number: 4 (lower is better)
Translates to: MAYEQYLNKELTKKGKENGRAVS*GHGFES
Trigger: GCTTTCAAACCCGTGGCCTCAGGACACAGCCCTGCC...GTTTTCCTTTCCCTTTTTCGTTAACTCTTTGTTGAGATATTGTTCGTATGCCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000319921.4
CDS-3UTR TCA 90 bp CACGCCGCAGACGAGGAGAGAGGAGTCTTCTCTCCAAAGTCATCCAAAGATAGCGCTGGTGCTTGTAAATaGACTCATACTCAAAAGATT +
Preference number: 4 (lower is better)
Translates to: HAADEERGVFSPKSSKDSAGACK*THTQKI
Trigger: AATCTTTTGAGTATGAGTTCATTTACAAGCACCAGC...GCTATCTTTGGATGACTTTGGAGAGAAGACTCCTCTCTCCTCGTCTGCGGCGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp GTCTCTTCTAAAAATACAAAAGGAACCGAGTGTGGCGGCACATTGTTCTTTAAATTGTTCCCGGAACGGTaGGAAGGAGAGTCCCTCCAG +
Preference number: 4 (lower is better)
Translates to: VSSKNTKGTECGGTLFFKLFPER*EGESLQ
Trigger: CTGGAGGGACTCTCCTTCTCACCGTTCCGGGAACAA...TTTAAAGAACAATGTGCCGCCACACTCGGTTCCTTTTGTATTTTTAGAAGAGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000319921.4
CDS-3UTR TCA 90 bp ATGGCATACGAACAATATCTCAACAAAGAGTTAACGAAAAAGGGAAAGGAAAACGCAGAGGGGAGTGGGTaGCTAGAGGGGAGGAGGATG +
Preference number: 4 (lower is better)
Translates to: MAYEQYLNKELTKKGKENAEGSG*LEGRRM
Trigger: CATCCTCCTCCCCTCTAGTCACCCACTCCCCTCTGC...GTTTTCCTTTCCCTTTTTCGTTAACTCTTTGTTGAGATATTGTTCGTATGCCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000319921.4
CDS-3UTR TCA 90 bp ACTGCGTGTGTGGCTGAGCTACAAGTCTCCTGGAATGTAAACAATGTTGGTTTAGGATACAGAACTGCTTaGCTTGCTGCAGGTAGCACT +
Preference number: 4 (lower is better)
Translates to: TACVAELQVSWNVNNVGLGYRTA*LAAGST
Trigger: AGTGCTACCTGCAGCAAGTCAAGCAGTTCTGTATCC...TAAACCAACATTGTTTACATTCCAGGAGACTTGTAGCTCAGCCACACACGCAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp AGGACTAGATATTCATACATGCGAGAGCACACTGAGACTGCATGTTTATTTGGCCTGACGATCTGCCGCTaGATCTTCTCCAGATCGAAC +
Preference number: 4 (lower is better)
Translates to: RTRYSYMREHTETACLFGLTICR*IFSRSN
Trigger: GTTCGATCTGGAGAAGATTCAGCGGCAGATCGTCAG...GCCAAATAAACATGCAGTCTCAGTGTGCTCTCGCATGTATGAATATCTAGTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp GAGTCCTGGACAAGCATTTTGTATTTTTGTAGTTCTCACTCCTTAGGCCCAATTAGCACGCCTTGGTCTTaGATTCGGTGCTACGCTGAC +
Preference number: 4 (lower is better)
Translates to: ESWTSILYFCSSHSLGPISTPWS*IRCYAD
Trigger: GTCAGCGTAGCACCGAATTCAAGACCAAGGCGTGCT...AATTGGGCCTAAGGAGTGAGAACTACAAAAATACAAAATGCTTGTCCAGGACTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp TTTATGCGTGAGAAAACCAAGGCCCTGATGGTGTCCCTGGTCCAAGTCCAGTGCGTTTTGTATGTGCTCTaGGTCCTAGTTTTTATGTCT +
Preference number: 4 (lower is better)
Translates to: FMREKTKALMVSLVQVQCVLYVL*VLVFMS
Trigger: AGACATAAAAACTAGGACTCAGAGCACATACAAAAC...GCACTGGACTTGGACCAGGGACACCATCAGGGCCTTGGTTTTCTCACGCATAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp AGGACTAGATATTCATACATGCGAGAGCACACTGAGACTGCATGTTTATTTGGCATGCCAGGGACTGTGTaGAGTCAGTTACTGCCTGCA +
Preference number: 4 (lower is better)
Translates to: RTRYSYMREHTETACLFGMPGTV*SQLLPA
Trigger: TGCAGGCAGTAACTGACTTCACACAGTCCCTGGCAT...GCCAAATAAACATGCAGTCTCAGTGTGCTCTCGCATGTATGAATATCTAGTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp GTTCTAGACCACAGGTTTCTCGCCTGGAAGAACCTTTCCTTTTTGGAAGAGAAAACTGCTGAGGTCTTGTaGGTGTCTTACTGCAAGCAC +
Preference number: 4 (lower is better)
Translates to: VLDHRFLAWKNLSFLEEKTAEVL*VSYCKH
Trigger: GTGCTTGCAGTAAGACACTCACAAGACCTCAGCAGT...TTTCTCTTCCAAAAAGGAAAGGTTCTTCCAGGCGAGAAACCTGTGGTCTAGAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR TCA 90 bp ACCACAGAAAGGACTAGATATTCATACATGCGAGAGCACACTGAGACTGCATGTGTTCGACTCGGTCCTTaGTCCAATCTCTTTGGTCCT +
Preference number: 4 (lower is better)
Translates to: TTERTRYSYMREHTETACVRLGP*SNLFGP
Trigger: AGGACCAAAGAGATTGGATCAAGGACCGAGTCGAAC...ACATGCAGTCTCAGTGTGCTCTCGCATGTATGAATATCTAGTCCTTTCTGTGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp ACCACAGAAAGGACTAGATATTCATACATGCGAGAGCACACTGAGACTGCATGTACTGCAGAAGACCTCTaGAAACCTCTCCACTTCCGT +
Preference number: 4 (lower is better)
Translates to: TTERTRYSYMREHTETACTAEDL*KPLHFR
Trigger: ACGGAAGTGGAGAGGTTTTCAGAGGTCTTCTGCAGT...ACATGCAGTCTCAGTGTGCTCTCGCATGTATGAATATCTAGTCCTTTCTGTGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp GTTCTAGACCACAGGTTTCTCGCCTGGAAGAACCTTTCCTTTTTGGAAGAGAAATATCAAAGTCGACATTaGAGGGCACCCTCTGGAGCA +
Preference number: 4 (lower is better)
Translates to: VLDHRFLAWKNLSFLEEKYQSRH*RAPSGA
Trigger: TGCTCCAGAGGGTGCCCTTCAATGTCGACTTTGATA...TTTCTCTTCCAAAAAGGAAAGGTTCTTCCAGGCGAGAAACCTGTGGTCTAGAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR TCA 90 bp AGAATGAATATTAAGGATACTGCCTCTAACATATCAATAGCTGTGCTGAGCTGTCTGGACGAGGATGTCTaGGGAGCAGATGCCCTTGGC +
Preference number: 4 (lower is better)
Translates to: RMNIKDTASNISIAVLSCLDEDV*GADALG
Trigger: GCCAAGGGCATCTGCTCCTCAGACATCCTCGTCCAG...ACAGCTCAGCACAGCTATTGATATGTTAGAGGCAGTATCCTTAATATTCATTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp TCACAATTTCAAAATGTCAGATCAGAAGAATCTTTGGCGATTAATCCACTCTCCAGGCGGAAGTTGGGGTaGACCCGACATTTGACGCGG +
Preference number: 4 (lower is better)
Translates to: SQFQNVRSEESLAINPLSRRKLG*TRHLTR
Trigger: CCGCGTCAAATGTCGGGTTCACCCCAACTTCCGCCT...GGAGAGTGGATTAATCGCCAAAGATTCTTCTGATCTGACATTTTGAAATTGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp AGAAACAGCTCGGCTTTCAAAAAGCTGTCAGCTCAGGTAGCACGCCTTGGTCTTTGCCTCTTCTGGAAATaGTGTGCTTTGACATTGATG +
Preference number: 4 (lower is better)
Translates to: RNSSAFKKLSAQVARLGLCLFWK*CALTLM
Trigger: CATCAATGTCAAAGCACATCATTTCCAGAAGAGGCA...AAGACCAAGGCGTGCTACCTGAGCTGACAGCTTTTTGAAAGCCGAGCTGTTTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp AGGACTAGATATTCATACATGCGAGAGCACACTGAGACTGCATGTTTATTTGGCTTGTGCCTCTGTCTGTaGAAGTACTCCTGCGACAGC +
Preference number: 4 (lower is better)
Translates to: RTRYSYMREHTETACLFGLCLCL*KYSCDS
Trigger: GCTGTCGCAGGAGTACTTTCACAGACAGAGGCACAA...GCCAAATAAACATGCAGTCTCAGTGTGCTCTCGCATGTATGAATATCTAGTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp GCACGCCTTGGTCTTGAATTCGGTGCTACGCTGACAGCTCTCCTTCTGAATGCATATCCACAACATCATTaGATGGAGAGAGAGATTTTG +
Preference number: 4 (lower is better)
Translates to: ARLGLEFGATLTALLLNAYPQHH*MEREIL
Trigger: CAAAATCTCTCTCTCCATTCAATGATGTTGTGGATA...TGCATTCAGAAGGAGAGCTGTCAGCGTAGCACCGAATTCAAGACCAAGGCGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp GTCTCTTCTAAAAATACAAAAGGAACCGAGTGTGGCGGCACATTGTTCTTTAAAACACTCCATGGGTCCTaGTGGGACTGCCCTGCAGAT +
Preference number: 4 (lower is better)
Translates to: VSSKNTKGTECGGTLFFKTLHGS*WDCPAD
Trigger: ATCTGCAGGGCAGTCCCAGCAGGACCCATGGAGTGT...TTTAAAGAACAATGTGCCGCCACACTCGGTTCCTTTTGTATTTTTAGAAGAGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000319921.4
CDS-3UTR GCA 90 bp TGCTGGCCAGTCTATCTTACACAAAGTTTTAAGTTTTCCTGGTGTCATAGTACTCGGGCTCAGCGTGCTTaGCTTCACTTCCTGGACATC +
Preference number: 4 (lower is better)
Translates to: CWPVYLTQSFKFSWCHSTRAQRA*LHFLDI
Trigger: GATGTCCAGGAAGTGAAGGCAAGCACGCTGAGCCCG...AGTACTATGACACCAGGAAAACTTAAAACTTTGTGTAAGATAGACTGGCCAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR GCA 90 bp TCGGCTTTCAAAAAGCTGTCAGCTCAGGTAGCACGCCTTGGTCTTGAATTCGGTGGTGCTTCTTGGAAATaGAGACAATGCCTTCAACAA +
Preference number: 4 (lower is better)
Translates to: SAFKKLSAQVARLGLEFGGASWK*RQCLQQ
Trigger: TTGTTGAAGGCATTGTCTGCATTTCCAAGAAGCACC...ACCGAATTCAAGACCAAGGCGTGCTACCTGAGCTGACAGCTTTTTGAAAGCCGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp TGCACTTTCCTGGCGCTTGTTTTTCCAGCTGGAAACGGGATTCGTAATGGTAATTCTTTCTCCCTGTACTaGAAATCGGTCCACAGCTGT +
Preference number: 4 (lower is better)
Translates to: CTFLALVFPAGNGIRNGNSFSLY*KSVHSC
Trigger: ACAGCTGTGGACCGATTTGCAGTACAGGGAGAAAGA...ATTACCATTACGAATCCCGTTTCCAGCTGGAAAAACAAGCGCCAGGAAAGTGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR GCA 90 bp CAGATCTCGGTGGCAGGTGGCTCTGCACAGTCCAGAGTGATAAAACAATCACAGAGGGTTTTATCTAGATaGTCCAGTTCAGGAGAAATC +
Preference number: 4 (lower is better)
Translates to: QISVAGGSAQSRVIKQSQRVLSR*SSSGEI
Trigger: GATTTCTCCTGAACTGGAGCATCTAGATAAAACCCT...CTGTGATTGTTTTATCACTCTGGACTGTGCAGAGCCACCTGCCACCGAGATCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp ACTGCGTGTGTGGCTGAGCTACAAGTCTCCTGGAATGTAAACAATGTTGGTTTAGACGTGCTTGACATCTaGCAACGTGAGCAGATGCTT +
Preference number: 4 (lower is better)
Translates to: TACVAELQVSWNVNNVGLDVLDI*QREQML
Trigger: AAGCATCTGCTCACGTTGGCAGATGTCAAGCACGTC...TAAACCAACATTGTTTACATTCCAGGAGACTTGTAGCTCAGCCACACACGCAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp GAGTCCTGGACAAGCATTTTGTATTTTTGTAGTTCTCACTCCTTAGGCCCAATTCAGGTGGTAATGCGTTaGCCTCTGCGAGTTCGAGGA +
Preference number: 4 (lower is better)
Translates to: ESWTSILYFCSSHSLGPIQVVMR*PLRVRG
Trigger: TCCTCGAACTCGCAGAGGGCAACGCATTACCACCTG...AATTGGGCCTAAGGAGTGAGAACTACAAAAATACAAAATGCTTGTCCAGGACTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp AGAAACAGCTCGGCTTTCAAAAAGCTGTCAGCTCAGGTAGCACGCCTTGGTCTTTCAAGCTCAAGGATGTaGCTTTCTGATTCTTCTTCG +
Preference number: 4 (lower is better)
Translates to: RNSSAFKKLSAQVARLGLSSSRM*LSDSSS
Trigger: CGAAGAAGAATCAGAAAGGCACATCCTTGAGCTTGA...AAGACCAAGGCGTGCTACCTGAGCTGACAGCTTTTTGAAAGCCGAGCTGTTTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp TCGGCTTTCAAAAAGCTGTCAGCTCAGGTAGCACGCCTTGGTCTTGAATTCGGTTCAAGCTCAAGGATGTaGCTTTCTGATTCTTCTTCG +
Preference number: 4 (lower is better)
Translates to: SAFKKLSAQVARLGLEFGSSSRM*LSDSSS
Trigger: CGAAGAAGAATCAGAAAGGCACATCCTTGAGCTTGA...ACCGAATTCAAGACCAAGGCGTGCTACCTGAGCTGACAGCTTTTTGAAAGCCGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp GAAAGTTTCAGAACATGTATGTACATGGTTCAGAAACAGCTCGGCTTTCAAAAAAGGTGGTTGCCGGGGTaGAGAGCAGCACCTCATCGT +
Preference number: 4 (lower is better)
Translates to: ESFRTCMYMVQKQLGFQKRWLPG*RAAPHR
Trigger: ACGATGAGGTGCTGCTCTGCACCCCGGCAACCACCT...TTTTTGAAAGCCGAGCTGTTTCTGAACCATGTACATACATGTTCTGAAACTTTC
47% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp ACCACAGAAAGGACTAGATATTCATACATGCGAGAGCACACTGAGACTGCATGTGCAGTTGTTCCTCCGTaGACCTTGACCAGCTTTATG +
Preference number: 4 (lower is better)
Translates to: TTERTRYSYMREHTETACAVVPP*TLTSFM
Trigger: CATAAAGCTGGTCAAGGTGCACGGAGGAACAACTGC...ACATGCAGTCTCAGTGTGCTCTCGCATGTATGAATATCTAGTCCTTTCTGTGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp AGGACTAGATATTCATACATGCGAGAGCACACTGAGACTGCATGTTTATTTGGCAGAAAGGCATTCAGCTaGGCTAAGAGCATCGCGCTG +
Preference number: 4 (lower is better)
Translates to: RTRYSYMREHTETACLFGRKAFS*AKSIAL
Trigger: CAGCGCGATGCTCTTAGCGCAGCTGAATGCCTTTCT...GCCAAATAAACATGCAGTCTCAGTGTGCTCTCGCATGTATGAATATCTAGTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp GAAAGTTTCAGAACATGTATGTACATGGTTCAGAAACAGCTCGGCTTTCAAAAAGGAGAGCGTCCTGGTTaGAGGCTTCCCTTGCCAACC +
Preference number: 4 (lower is better)
Translates to: ESFRTCMYMVQKQLGFQKGERPG*RLPLPT
Trigger: GGTTGGCAAGGGAAGCCTGCAACCAGGACGCTCTCC...TTTTTGAAAGCCGAGCTGTTTCTGAACCATGTACATACATGTTCTGAAACTTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp AGGACTAGATATTCATACATGCGAGAGCACACTGAGACTGCATGTTTATTTGGCCATCCAAAGATCTCTTaGCCAGGGCGGAGTATCTGG +
Preference number: 4 (lower is better)
Translates to: RTRYSYMREHTETACLFGHPKIS*PGRSIW
Trigger: CCAGATACTCCGCCCTGGGCAAGAGATCTTTGGATG...GCCAAATAAACATGCAGTCTCAGTGTGCTCTCGCATGTATGAATATCTAGTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp GATGAGAAAGTTTCAGAACATGTATGTACATGGTTCAGAAACAGCTCGGCTTTCACAGACGGGGTCCTTTaGATCTCCCAGGCAGATGGA +
Preference number: 4 (lower is better)
Translates to: DEKVSEHVCTWFRNSSAFTDGVL*ISQADG
Trigger: TCCATCTGCCTGGGAGATGCAAAGGACCCCGTCTGT...GAAAGCCGAGCTGTTTCTGAACCATGTACATACATGTTCTGAAACTTTCTCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp AGGACTAGATATTCATACATGCGAGAGCACACTGAGACTGCATGTTTATTTGGCTCAATGGCTTCCCTGTaGGCTTGGGAAACAGCTGGA +
Preference number: 4 (lower is better)
Translates to: RTRYSYMREHTETACLFGSMASL*AWETAG
Trigger: TCCAGCTGTTTCCCAAGCGCACAGGGAAGCCATTGA...GCCAAATAAACATGCAGTCTCAGTGTGCTCTCGCATGTATGAATATCTAGTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp TCGGCTTTCAAAAAGCTGTCAGCTCAGGTAGCACGCCTTGGTCTTGAATTCGGTCTGATGAAGACTTTATaGAGGTCAGGATTGAATGGG +
Preference number: 4 (lower is better)
Translates to: SAFKKLSAQVARLGLEFGLMKTL*RSGLNG
Trigger: CCCATTCAATCCTGACCTCCATAAAGTCTTCATCAG...ACCGAATTCAAGACCAAGGCGTGCTACCTGAGCTGACAGCTTTTTGAAAGCCGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp TTCCAAAGACCAGTCTTACCAAGTTTCAGATGTCTGGACTCCAAGTGGCAGTTCTGTCCTCTAAGCCTTTaGTGTCCCAGCAACTATTGC +
Preference number: 4 (lower is better)
Translates to: FQRPVLPSFRCLDSKWQFCPLSL*CPSNYC
Trigger: GCAATAGTTGCTGGGACACCAAAGGCTTAGAGGACA...GAACTGCCACTTGGAGTCCAGACATCTGAAACTTGGTAAGACTGGTCTTTGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR CCA 90 bp ATCAAGTCCACGCCGCAGACGAGGAGAGAGGAGTCTTCTCTCCAAAGTCATCCATTCTGGAGTAAGCACTaGTCTTCTCAAGTATTGAAT +
Preference number: 4 (lower is better)
Translates to: IKSTPQTRREESSLQSHPFWSKH*SSQVLN
Trigger: ATTCAATACTTGAGAAGACCAGTGCTTACTCCAGAA...TGGATGACTTTGGAGAGAAGACTCCTCTCTCCTCGTCTGCGGCGTGGACTTGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp GAGTCCTGGACAAGCATTTTGTATTTTTGTAGTTCTCACTCCTTAGGCCCAATTACTCGAGGACAGCTTTaGCCACAGCATCACGGAGAG +
Preference number: 4 (lower is better)
Translates to: ESWTSILYFCSSHSLGPITRGQL*PQHHGE
Trigger: CTCTCCGTGATGCTGTGGCCAAAGCTGTCCTCGAGT...AATTGGGCCTAAGGAGTGAGAACTACAAAAATACAAAATGCTTGTCCAGGACTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp CAATTTCAAAATGTCAGATCAGAAGAATCTTTGGCGATTAATCCACTCTCCATTGGGTTGCCCAGCACGTaGCCGGTCTGCGTTCTGTCT +
Preference number: 4 (lower is better)
Translates to: QFQNVRSEESLAINPLSIGLPST*PVCVLS
Trigger: AGACAGAACGCAGACCGGCCACGTGCTGGGCAACCC...AATGGAGAGTGGATTAATCGCCAAAGATTCTTCTGATCTGACATTTTGAAATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp AGAATGAATATTAAGGATACTGCCTCTAACATATCAATAGCTGTGCTGAGCTGTAGCTGGTGCTGCTCTTaGAGAAGCCTGCGCAGGACG +
Preference number: 4 (lower is better)
Translates to: RMNIKDTASNISIAVLSCSWCCS*RSLRRT
Trigger: CGTCCTGCGCAGGCTTCTCCAAGAGCAGCACCAGCT...ACAGCTCAGCACAGCTATTGATATGTTAGAGGCAGTATCCTTAATATTCATTCT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp AGGACTAGATATTCATACATGCGAGAGCACACTGAGACTGCATGTTTATTTGGCTGCTCAAGGTGTGCATaGCTGAGTCCTGGACAAGCA +
Preference number: 4 (lower is better)
Translates to: RTRYSYMREHTETACLFGCSRCA*LSPGQA
Trigger: TGCTTGTCCAGGACTCAGCCATGCACACCTTGAGCA...GCCAAATAAACATGCAGTCTCAGTGTGCTCTCGCATGTATGAATATCTAGTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp AGAATGAATATTAAGGATACTGCCTCTAACATATCAATAGCTGTGCTGAGCTGTCCACCTCCTCAAAGGTaGTTGCCGGGGTGCAGAGCA +
Preference number: 4 (lower is better)
Translates to: RMNIKDTASNISIAVLSCPPPQR*LPGCRA
Trigger: TGCTCTGCACCCCGGCAACCACCTTTGAGGAGGTGG...ACAGCTCAGCACAGCTATTGATATGTTAGAGGCAGTATCCTTAATATTCATTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp CAATTTCAAAATGTCAGATCAGAAGAATCTTTGGCGATTAATCCACTCTCCATTGCTGATGATGCCCTGTaGGGTGGAGTGCGGGCTGCA +
Preference number: 4 (lower is better)
Translates to: QFQNVRSEESLAINPLSIADDAL*GGVRAA
Trigger: TGCAGCCCGCACTCCACCCCACAGGGCATCATCAGC...AATGGAGAGTGGATTAATCGCCAAAGATTCTTCTGATCTGACATTTTGAAATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp GATGAGAAAGTTTCAGAACATGTATGTACATGGTTCAGAAACAGCTCGGCTTTCTCTTCAGGGGCATTTTaGGTGAGTCTTCCGCCAGCC +
Preference number: 4 (lower is better)
Translates to: DEKVSEHVCTWFRNSSAFSSGAF*VSLPPA
Trigger: GGCTGGCGGAAGACTCACCCAAAATGCCCCTGAAGA...GAAAGCCGAGCTGTTTCTGAACCATGTACATACATGTTCTGAAACTTTCTCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp GAGTCCTGGACAAGCATTTTGTATTTTTGTAGTTCTCACTCCTTAGGCCCAATTAAGCCGACCTTTTTGTaGGGGGCGGGATCGTCTTCA +
Preference number: 4 (lower is better)
Translates to: ESWTSILYFCSSHSLGPIKPTFL*GAGSSS
Trigger: TGAAGACGATCCCGCCCCCCACAAAAAGGTCGGCTT...AATTGGGCCTAAGGAGTGAGAACTACAAAAATACAAAATGCTTGTCCAGGACTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp AGAATGAATATTAAGGATACTGCCTCTAACATATCAATAGCTGTGCTGAGCTGTTGCCCCGGTTCATCTTaGCAGGGTCAAGGGCCCAGT +
Preference number: 4 (lower is better)
Translates to: RMNIKDTASNISIAVLSCCPGSS*QGQGPS
Trigger: ACTGGGCCCTTGACCCTGCCAAGATGAACCGGGGCA...ACAGCTCAGCACAGCTATTGATATGTTAGAGGCAGTATCCTTAATATTCATTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp GAGTCCTGGACAAGCATTTTGTATTTTTGTAGTTCTCACTCCTTAGGCCCAATTCGCAAGAAAGAGGCGTaGCACGCGTCATCCTCATTC +
Preference number: 4 (lower is better)
Translates to: ESWTSILYFCSSHSLGPIRKKEA*HASSSF
Trigger: GAATGAGGATGACGCGTGCCACGCCTCTTTCTTGCG...AATTGGGCCTAAGGAGTGAGAACTACAAAAATACAAAATGCTTGTCCAGGACTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp AGGACTAGATATTCATACATGCGAGAGCACACTGAGACTGCATGTTTATTTGGCGCTTCCCTGTGCGCTTaGGAAACAGCTGGAGAGAAT +
Preference number: 4 (lower is better)
Translates to: RTRYSYMREHTETACLFGASLCA*ETAGEN
Trigger: ATTCTCTCCAGCTGTTTCCCAAGCGCACAGGGAAGC...GCCAAATAAACATGCAGTCTCAGTGTGCTCTCGCATGTATGAATATCTAGTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp AGGACTAGATATTCATACATGCGAGAGCACACTGAGACTGCATGTTTATTTGGCCTTAAGCGCCCCTTTTaGACGAAGAGGAGAGAGAGC +
Preference number: 4 (lower is better)
Translates to: RTRYSYMREHTETACLFGLKRPF*TKRRES
Trigger: GCTCTCTCTCCTCTTCGTCCAAAAGGGGCGCTTAAG...GCCAAATAAACATGCAGTCTCAGTGTGCTCTCGCATGTATGAATATCTAGTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp ACTGCGTGTGTGGCTGAGCTACAAGTCTCCTGGAATGTAAACAATGTTGGTTTATCCCCTCAAATGGAGTaGGCAAGTTCCAAAGACCAG +
Preference number: 4 (lower is better)
Translates to: TACVAELQVSWNVNNVGLSPQME*ASSKDQ
Trigger: CTGGTCTTTGGAACTTGCCCACTCCATTTGAGGGGA...TAAACCAACATTGTTTACATTCCAGGAGACTTGTAGCTCAGCCACACACGCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582970.5
3UTR CAA 72 bp GTAATGGGCATAAATCAAAAGGCGCTGCTGATGGACTaGGCAGATCAGCAAGACACAGCAAATCTGTCAACC +
Preference number: 4 (lower is better)
Translates to: VMGINQKALLMD*ADQQDTANLST
Trigger: GGTTGACAGATTTGCTGTGTCTTGCTGATCTGCCAAGTCCATCAGCAGCGCCTTTTGATTTATGCCCATTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573038.1
CDS-3UTR TCA 90 bp CAATTTCAAAATGTCAGATCAGAAGAATCTTTGGCGATTAATCCACTCTCCATTAACTGCCATAGAGGCTaGGGCCCCTGCCTGTTGCTC +
Preference number: 4 (lower is better)
Translates to: QFQNVRSEESLAINPLSINCHRG*GPCLLL
Trigger: GAGCAACAGGCAGGGGCCTCAGCCTCTATGGCAGTT...AATGGAGAGTGGATTAATCGCCAAAGATTCTTCTGATCTGACATTTTGAAATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp AGGACTAGATATTCATACATGCGAGAGCACACTGAGACTGCATGTTTATTTGGCGGAAATGAAGAGAGATaGTGGCGTGGAAGAACACGG +
Preference number: 4 (lower is better)
Translates to: RTRYSYMREHTETACLFGGNEER*WRGRTR
Trigger: CCGTGTTCTTCCACGCCATCATCTCTCTTCATTTCC...GCCAAATAAACATGCAGTCTCAGTGTGCTCTCGCATGTATGAATATCTAGTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp ATGGCATACGAACAATATCTCAACAAAGAGTTAACGAAAAAGGGAAAGGAAAACAGGTGCTGTCCAGCATaGGCGCAGCGGCAATCTGCT +
Preference number: 4 (lower is better)
Translates to: MAYEQYLNKELTKKGKENRCCPA*AQRQSA
Trigger: AGCAGATTGCCGCTGCGCTCATGCTGGACAGCACCT...GTTTTCCTTTCCCTTTTTCGTTAACTCTTTGTTGAGATATTGTTCGTATGCCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000319921.4
CDS-3UTR TCA 90 bp GAAAGTTTCAGAACATGTATGTACATGGTTCAGAAACAGCTCGGCTTTCAAAAATTGTTCCCGGAACGGTaGGAAGGAGAGTCCCTCCAG +
Preference number: 4 (lower is better)
Translates to: ESFRTCMYMVQKQLGFQKLFPER*EGESLQ
Trigger: CTGGAGGGACTCTCCTTCTCACCGTTCCGGGAACAA...TTTTTGAAAGCCGAGCTGTTTCTGAACCATGTACATACATGTTCTGAAACTTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp AGAAACAGCTCGGCTTTCAAAAAGCTGTCAGCTCAGGTAGCACGCCTTGGTCTTTTCTCTCTCATAAACTaGAGTAGGGAACTCGTATCT +
Preference number: 4 (lower is better)
Translates to: RNSSAFKKLSAQVARLGLFSLIN*SRELVS
Trigger: AGATACGAGTTCCCTACTTCAGTTTATGAGAGAGAA...AAGACCAAGGCGTGCTACCTGAGCTGACAGCTTTTTGAAAGCCGAGCTGTTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp GTCTCTTCTAAAAATACAAAAGGAACCGAGTGTGGCGGCACATTGTTCTTTAAAGTTCACCTGGCAGGCTaGGCTCACGGCTTCAATGAT +
Preference number: 4 (lower is better)
Translates to: VSSKNTKGTECGGTLFFKVHLAG*AHGFND
Trigger: ATCATTGAAGCCGTGAGCTCAGCCTGCCAGGTGAAC...TTTAAAGAACAATGTGCCGCCACACTCGGTTCCTTTTGTATTTTTAGAAGAGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000319921.4
CDS-3UTR TCA 90 bp GATGAGAAAGTTTCAGAACATGTATGTACATGGTTCAGAAACAGCTCGGCTTTCAGAAGCAGAGCCAAGTaGGTGAGTAGCCGGATAAGG +
Preference number: 4 (lower is better)
Translates to: DEKVSEHVCTWFRNSSAFRSRAK*VSSRIR
Trigger: CCTTATCCGGCTACTCACTCACTTGGCTCTGCTTCT...GAAAGCCGAGCTGTTTCTGAACCATGTACATACATGTTCTGAAACTTTCTCATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp GAGTCCTGGACAAGCATTTTGTATTTTTGTAGTTCTCACTCCTTAGGCCCAATTTTCCTCCGTGCACCTTaGCCAGCTTTATGGTGTCAG +
Preference number: 4 (lower is better)
Translates to: ESWTSILYFCSSHSLGPIFLRAP*PALWCQ
Trigger: CTGACACCATAAAGCTGGTCAAGGTGCACGGAGGAA...AATTGGGCCTAAGGAGTGAGAACTACAAAAATACAAAATGCTTGTCCAGGACTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp GAGTCCTGGACAAGCATTTTGTATTTTTGTAGTTCTCACTCCTTAGGCCCAATTGCTCGTGGAACCACCTaGAAACTTTCACACAGCGCT +
Preference number: 4 (lower is better)
Translates to: ESWTSILYFCSSHSLGPIARGTT*KLSHSA
Trigger: AGCGCTGTGTGAAAGTTTTCAGGTGGTTCCACGAGC...AATTGGGCCTAAGGAGTGAGAACTACAAAAATACAAAATGCTTGTCCAGGACTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp TCACAATTTCAAAATGTCAGATCAGAAGAATCTTTGGCGATTAATCCACTCTCCCCACCCGGCACCTTCTaGGAAGGCCCAAAGATGTTC +
Preference number: 4 (lower is better)
Translates to: SQFQNVRSEESLAINPLSPPGTF*EGPKMF
Trigger: GAACATCTTTGGGCCTTCTCAGAAGGTGCCGGGTGG...GGAGAGTGGATTAATCGCCAAAGATTCTTCTGATCTGACATTTTGAAATTGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp GAAAGTTTCAGAACATGTATGTACATGGTTCAGAAACAGCTCGGCTTTCAAAAACCACCCGGCACCTTCTaGGAAGGCCCAAAGATGTTC +
Preference number: 4 (lower is better)
Translates to: ESFRTCMYMVQKQLGFQKPPGTF*EGPKMF
Trigger: GAACATCTTTGGGCCTTCTCAGAAGGTGCCGGGTGG...TTTTTGAAAGCCGAGCTGTTTCTGAACCATGTACATACATGTTCTGAAACTTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp AGAATGAATATTAAGGATACTGCCTCTAACATATCAATAGCTGTGCTGAGCTGTGCTCATCGGAGCAGATaGGCTCCAGCGGCATGGAAA +
Preference number: 4 (lower is better)
Translates to: RMNIKDTASNISIAVLSCAHRSR*APAAWK
Trigger: TTTCCATGCCGCTGGAGCTCATCTGCTCCGATGAGC...ACAGCTCAGCACAGCTATTGATATGTTAGAGGCAGTATCCTTAATATTCATTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp GGCATACGAACAATATCTCAACAAAGAGTTAACGAAAAAGGGAAAGGAAAACCTCTGCTGGGACTGCCCTaGAGATCCAGAAGCAAGAGC +
Preference number: 4 (lower is better)
Translates to: GIRTISQQRVNEKGKGKPLLGLP*RSRSKS
Trigger: GCTCTTGCTTCTGGATCTGCAGGGCAGTCCCAGCAG...AGGTTTTCCTTTCCCTTTTTCGTTAACTCTTTGTTGAGATATTGTTCGTATGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000319921.4
CDS-3UTR GCA 90 bp ATGGCATACGAACAATATCTCAACAAAGAGTTAACGAAAAAGGGAAAGGAAAACGGGTCCTGCTGGGACTaGCCTGCAGATCCAGAAGCA +
Preference number: 4 (lower is better)
Translates to: MAYEQYLNKELTKKGKENGSCWD*PADPEA
Trigger: TGCTTCTGGATCTGCAGGGCAGTCCCAGCAGGACCC...GTTTTCCTTTCCCTTTTTCGTTAACTCTTTGTTGAGATATTGTTCGTATGCCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000319921.4
CDS-3UTR GCA 90 bp GGCATACGAACAATATCTCAACAAAGAGTTAACGAAAAAGGGAAAGGAAAACCTTCCTCGGGGTTTTCTTaGCAACTGTCTGAGCCCGGG +
Preference number: 4 (lower is better)
Translates to: GIRTISQQRVNEKGKGKPSSGFS*QLSEPG
Trigger: CCCGGGCTCAGACAGTTGGCAAGAAAACCCCGAGGA...AGGTTTTCCTTTCCCTTTTTCGTTAACTCTTTGTTGAGATATTGTTCGTATGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000319921.4
CDS-3UTR GCA 90 bp GAAAGTTTCAGAACATGTATGTACATGGTTCAGAAACAGCTCGGCTTTCAAAAATCCTCGGGGTTTTCTTaGCAACTGTCTGAGCCCGGG +
Preference number: 4 (lower is better)
Translates to: ESFRTCMYMVQKQLGFQKSSGFS*QLSEPG
Trigger: CCCGGGCTCAGACAGTTGGCAAGAAAACCCCGAGGA...TTTTTGAAAGCCGAGCTGTTTCTGAACCATGTACATACATGTTCTGAAACTTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp GGCATACGAACAATATCTCAACAAAGAGTTAACGAAAAAGGGAAAGGAAAACCTCCTGGAATTGCGGGCTaGTCTGAGCCTCACTTCCTG +
Preference number: 4 (lower is better)
Translates to: GIRTISQQRVNEKGKGKPPGIAG*SEPHFL
Trigger: CAGGAAGTGAGGCTCAGAGCAGCCCGCAATTCCAGG...AGGTTTTCCTTTCCCTTTTTCGTTAACTCTTTGTTGAGATATTGTTCGTATGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000319921.4
CDS-3UTR GCA 90 bp TCACAATTTCAAAATGTCAGATCAGAAGAATCTTTGGCGATTAATCCACTCTCCTCCCGGGCTCAGAGCTaGCTCCTTTTGACTCAGGCA +
Preference number: 4 (lower is better)
Translates to: SQFQNVRSEESLAINPLSSRAQS*LLLTQA
Trigger: TGCCTGAGTCAAAAGGAGGCAGCTCTGAGCCCGGGA...GGAGAGTGGATTAATCGCCAAAGATTCTTCTGATCTGACATTTTGAAATTGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp GGCATACGAACAATATCTCAACAAAGAGTTAACGAAAAAGGGAAAGGAAAACCTTGTTGCTCGGTGGTCTaGAGTTCTGTCCCGGGCTCA +
Preference number: 4 (lower is better)
Translates to: GIRTISQQRVNEKGKGKPCCSVV*SSVPGS
Trigger: TGAGCCCGGGACAGAACTGCAGACCACCGAGCAACA...AGGTTTTCCTTTCCCTTTTTCGTTAACTCTTTGTTGAGATATTGTTCGTATGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000319921.4
CDS-3UTR GCA 90 bp TGCACTTTCCTGGCGCTTGTTTTTCCAGCTGGAAACGGGATTCGTAATGGTAATTGGAAATGCAGACAATaGCTTCAACAAGAACGCGGT +
Preference number: 4 (lower is better)
Translates to: CTFLALVFPAGNGIRNGNWKCRQ*LQQERG
Trigger: ACCGCGTTCTTGTTGAAGGCATTGTCTGCATTTCCA...ATTACCATTACGAATCCCGTTTCCAGCTGGAAAAACAAGCGCCAGGAAAGTGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR GCA 90 bp TGCACTTTCCTGGCGCTTGTTTTTCCAGCTGGAAACGGGATTCGTAATGGTAATAGGACAAAGCAAAACTaGTCGAACTGGGTGAAGAAG +
Preference number: 4 (lower is better)
Translates to: CTFLALVFPAGNGIRNGNRTKQN*SNWVKK
Trigger: CTTCTTCACCCAGTTCGAGCAGTTTTGCTTTGTCCT...ATTACCATTACGAATCCCGTTTCCAGCTGGAAAAACAAGCGCCAGGAAAGTGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR GCA 90 bp ACTGCGTGTGTGGCTGAGCTACAAGTCTCCTGGAATGTAAACAATGTTGGTTTAACGTCCTTGTGTCCATaGATCTTTGGCACAGGTTCA +
Preference number: 4 (lower is better)
Translates to: TACVAELQVSWNVNNVGLTSLCP*IFGTGS
Trigger: TGAACCTGTGCCAAAGATGCATGGACACAAGGACGT...TAAACCAACATTGTTTACATTCCAGGAGACTTGTAGCTCAGCCACACACGCAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp GTTCTAGACCACAGGTTTCTCGCCTGGAAGAACCTTTCCTTTTTGGAAGAGAAAGTAGCTTTGTGCTGCTaGAGATGGCTTCATGCAGTT +
Preference number: 4 (lower is better)
Translates to: VLDHRFLAWKNLSFLEEKVALCC*RWLHAV
Trigger: AACTGCATGAAGCCATCTGCAGCAGCACAAAGCTAC...TTTCTCTTCCAAAAAGGAAAGGTTCTTCCAGGCGAGAAACCTGTGGTCTAGAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR GCA 90 bp CAATTTCAAAATGTCAGATCAGAAGAATCTTTGGCGATTAATCCACTCTCCATTTCCTGCCGCAGCCCCTaGTGCTTGACAACGTCCTTG +
Preference number: 4 (lower is better)
Translates to: QFQNVRSEESLAINPLSISCRSP*CLTTSL
Trigger: CAAGGACGTTGTCAAGCAGCAGGGGCTGCGGCAGGA...AATGGAGAGTGGATTAATCGCCAAAGATTCTTCTGATCTGACATTTTGAAATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp TCACAATTTCAAAATGTCAGATCAGAAGAATCTTTGGCGATTAATCCACTCTCCAGCACGTGGCCGGTCTaGGTTCTGTCTGCCTTGTCT +
Preference number: 4 (lower is better)
Translates to: SQFQNVRSEESLAINPLSSTWPV*VLSALS
Trigger: AGACAAGGCAGACAGAACGCAGACCGGCCACGTGCT...GGAGAGTGGATTAATCGCCAAAGATTCTTCTGATCTGACATTTTGAAATTGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp TCGGCTTTCAAAAAGCTGTCAGCTCAGGTAGCACGCCTTGGTCTTGAATTCGGTTGGGCACTCTTTCTTTaGCATTTTTCTGTTCCACAA +
Preference number: 4 (lower is better)
Translates to: SAFKKLSAQVARLGLEFGWALFL*HFSVPQ
Trigger: TTGTGGAACAGAAAAATGGCAAAGAAAGAGTGCCCA...ACCGAATTCAAGACCAAGGCGTGCTACCTGAGCTGACAGCTTTTTGAAAGCCGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp AGGACTAGATATTCATACATGCGAGAGCACACTGAGACTGCATGTTTATTTGGCTACCAGCCTCAGCTCTaGTTCCTTCTGCAGGAAATG +
Preference number: 4 (lower is better)
Translates to: RTRYSYMREHTETACLFGYQPQL*FLLQEM
Trigger: CATTTCCTGCAGAAGGAAGCAGAGCTGAGGCTGGTA...GCCAAATAAACATGCAGTCTCAGTGTGCTCTCGCATGTATGAATATCTAGTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp AGGACTAGATATTCATACATGCGAGAGCACACTGAGACTGCATGTTTATTTGGCTGTGAAGTCAGTTACTaGCTGCAGTCTGGGTCACTC +
Preference number: 4 (lower is better)
Translates to: RTRYSYMREHTETACLFGCEVSY*LQSGSL
Trigger: GAGTGACCCAGACTGCAGGCAGTAACTGACTTCACA...GCCAAATAAACATGCAGTCTCAGTGTGCTCTCGCATGTATGAATATCTAGTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp CAATTTCAAAATGTCAGATCAGAAGAATCTTTGGCGATTAATCCACTCTCCATTCTCCTCAAAGGTGGTTaGCGGGGTGCAGAGCAGCAC +
Preference number: 4 (lower is better)
Translates to: QFQNVRSEESLAINPLSILLKGG*RGAEQH
Trigger: GTGCTGCTCTGCACCCCGGCAACCACCTTTGAGGAG...AATGGAGAGTGGATTAATCGCCAAAGATTCTTCTGATCTGACATTTTGAAATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp GAAAGTTTCAGAACATGTATGTACATGGTTCAGAAACAGCTCGGCTTTCAAAAAGTGACGAAGACCTTGTaGTGGCTGAAGGCAGAGGGG +
Preference number: 4 (lower is better)
Translates to: ESFRTCMYMVQKQLGFQKVTKTL*WLKAEG
Trigger: CCCCTCTGCCTTCAGCCAGCACAAGGTCTTCGTCAC...TTTTTGAAAGCCGAGCTGTTTCTGAACCATGTACATACATGTTCTGAAACTTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp CAATTTCAAAATGTCAGATCAGAAGAATCTTTGGCGATTAATCCACTCTCCATTGACCCGGTAGTGACCTaGCAGGTAGGCTTGGATGGC +
Preference number: 4 (lower is better)
Translates to: QFQNVRSEESLAINPLSIDPVVT*QVGLDG
Trigger: GCCATCCAAGCCTACCTGGCAGGTCACTACCGGGTC...AATGGAGAGTGGATTAATCGCCAAAGATTCTTCTGATCTGACATTTTGAAATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp TCACAATTTCAAAATGTCAGATCAGAAGAATCTTTGGCGATTAATCCACTCTCCGTCATTGAACACGGCTaGCGCCGACAGGGTCTGCTT +
Preference number: 4 (lower is better)
Translates to: SQFQNVRSEESLAINPLSVIEHG*RRQGLL
Trigger: AAGCAGACCCTGTCGGCGGCAGCCGTGTTCAATGAC...GGAGAGTGGATTAATCGCCAAAGATTCTTCTGATCTGACATTTTGAAATTGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp TCAAGTCCACGCCGCAGACGAGGAGAGAGGAGTCTTCTCTCCAAAGTCATCCAATTTTTCACGTTTAACTaGATCTTCATTTTGTCGTGC +
Preference number: 4 (lower is better)
Translates to: SSPRRRRGERSLLSKVIQFFTFN*IFILSC
Trigger: GCACGACAAAATGAAGATGCAGTTAAACGTGAAAAA...TTGGATGACTTTGGAGAGAAGACTCCTCTCTCCTCGTCTGCGGCGTGGACTTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp GATGAGAAAGTTTCAGAACATGTATGTACATGGTTCAGAAACAGCTCGGCTTTCTCCACGATGCTCTTCTaGCATTTCTCCAGCACCGTG +
Preference number: 4 (lower is better)
Translates to: DEKVSEHVCTWFRNSSAFSTMLF*HFSSTV
Trigger: CACGGTGCTGGAGAAATGGCAGAAGAGCATCGTGGA...GAAAGCCGAGCTGTTTCTGAACCATGTACATACATGTTCTGAAACTTTCTCATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp AGAATGAATATTAAGGATACTGCCTCTAACATATCAATAGCTGTGCTGAGCTGTTGCCTCTCTATGACCTaGAGCACCACAGACGCGCAG +
Preference number: 4 (lower is better)
Translates to: RMNIKDTASNISIAVLSCCLSMT*STTDAQ
Trigger: CTGCGCGTCTGTGGTGCTGCAGGTCATAGAGAGGCA...ACAGCTCAGCACAGCTATTGATATGTTAGAGGCAGTATCCTTAATATTCATTCT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp AGAATGAATATTAAGGATACTGCCTCTAACATATCAATAGCTGTGCTGAGCTGTCCACCCTCCGCATATTaGGCGTGCAGCTCTCGTTCT +
Preference number: 4 (lower is better)
Translates to: RMNIKDTASNISIAVLSCPPSAY*ACSSRS
Trigger: AGAACGAGAGCTGCACGCGCAATATGCGGAGGGTGG...ACAGCTCAGCACAGCTATTGATATGTTAGAGGCAGTATCCTTAATATTCATTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp TCAAGTCCACGCCGCAGACGAGGAGAGAGGAGTCTTCTCTCCAAAGTCATCCAAGAAAGGCAAATAATTTaGACACACAATAAGGTCCTT +
Preference number: 4 (lower is better)
Translates to: SSPRRRRGERSLLSKVIQERQII*THNKVL
Trigger: AAGGACCTTATTGTGTGTGCAAATTATTTGCCTTTC...TTGGATGACTTTGGAGAGAAGACTCCTCTCTCCTCGTCTGCGGCGTGGACTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR CCA 90 bp GATGAGAAAGTTTCAGAACATGTATGTACATGGTTCAGAAACAGCTCGGCTTTCTCCTTGGAGACATGCTaGCACGAAGGACACTCCATG +
Preference number: 4 (lower is better)
Translates to: DEKVSEHVCTWFRNSSAFSLETC*HEGHSM
Trigger: CATGGAGTGTCCTTCGTGCCAGCATGTCTCCAAGGA...GAAAGCCGAGCTGTTTCTGAACCATGTACATACATGTTCTGAAACTTTCTCATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp GGCATACGAACAATATCTCAACAAAGAGTTAACGAAAAAGGGAAAGGAAAACCTAGCCTCTCTCCGCACTaGCTGCAGAACTTGGGGGTT +
Preference number: 4 (lower is better)
Translates to: GIRTISQQRVNEKGKGKPSLSPH*LQNLGV
Trigger: AACCCCCAAGTTCTGCAGCCAGTGCGGAGAGAGGCT...AGGTTTTCCTTTCCCTTTTTCGTTAACTCTTTGTTGAGATATTGTTCGTATGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000319921.4
CDS-3UTR CCA 90 bp ATGGCATACGAACAATATCTCAACAAAGAGTTAACGAAAAAGGGAAAGGAAAACTCCTCCCCTTCCGTGTaGTCCTGGAATTGCGGGCTG +
Preference number: 4 (lower is better)
Translates to: MAYEQYLNKELTKKGKENSSPSV*SWNCGL
Trigger: CAGCCCGCAATTCCAGGACCACACGGAAGGGGAGGA...GTTTTCCTTTCCCTTTTTCGTTAACTCTTTGTTGAGATATTGTTCGTATGCCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000319921.4
CDS-3UTR CCA 90 bp AGGACTAGATATTCATACATGCGAGAGCACACTGAGACTGCATGTTTATTTGGCTCTTCAGTCCTAGAATaGCCTTCACCAGCAGAGGTG +
Preference number: 4 (lower is better)
Translates to: RTRYSYMREHTETACLFGSSVLE*PSPAEV
Trigger: CACCTCTGCTGGTGAAGGCCATTCTAGGACTGAAGA...GCCAAATAAACATGCAGTCTCAGTGTGCTCTCGCATGTATGAATATCTAGTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp ACTGCGTGTGTGGCTGAGCTACAAGTCTCCTGGAATGTAAACAATGTTGGTTTACTTGCCTTCACTTCCTaGACATCTGCTTCCTGGTTT +
Preference number: 4 (lower is better)
Translates to: TACVAELQVSWNVNNVGLLAFTS*TSASWF
Trigger: AAACCAGGAAGCAGATGTCCAGGAAGTGAAGGCAAG...TAAACCAACATTGTTTACATTCCAGGAGACTTGTAGCTCAGCCACACACGCAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp ACCACAGAAAGGACTAGATATTCATACATGCGAGAGCACACTGAGACTGCATGTTTGTGCTGCTGCAGATaGCTTCATGCAGTTTCAGAC +
Preference number: 4 (lower is better)
Translates to: TTERTRYSYMREHTETACLCCCR*LHAVSD
Trigger: GTCTGAAACTGCATGAAGCCATCTGCAGCAGCACAA...ACATGCAGTCTCAGTGTGCTCTCGCATGTATGAATATCTAGTCCTTTCTGTGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp TGCTGGCCAGTCTATCTTACACAAAGTTTTAAGTTTTCCTGGTGTCATAGTACTATGCGCCATGGTGGCTaGGGAGAAGGCCAGATTCTT +
Preference number: 4 (lower is better)
Translates to: CWPVYLTQSFKFSWCHSTMRHGG*GEGQIL
Trigger: AAGAATCTGGCCTTCTCCCCAGCCACCATGGCGCAT...AGTACTATGACACCAGGAAAACTTAAAACTTTGTGTAAGATAGACTGGCCAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR CCA 90 bp TTTTTCCAGCTGGAAACGGGATTCGTAATGGTAATGGTTGAACTTAATGAACGTGGACAAGTGTACCAGTaGACTCGCTCCAGACCCTTC +
Preference number: 4 (lower is better)
Translates to: FFQLETGFVMVMVELNERGQVYQ*TRSRPF
Trigger: GAAGGGTCTGGAGCGAGTCCACTGGTACACTTGTCC...ACGTTCATTAAGTTCAACCATTACCATTACGAATCCCGTTTCCAGCTGGAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR CCA 90 bp GAAAGTTTCAGAACATGTATGTACATGGTTCAGAAACAGCTCGGCTTTCAAAAACCGTCCCGAGGTTTGTaGTCAATGCCTCCAATCGGC +
Preference number: 4 (lower is better)
Translates to: ESFRTCMYMVQKQLGFQKPSRGL*SMPPIG
Trigger: GCCGATTGGAGGCATTGACCACAAACCTCGGGACGG...TTTTTGAAAGCCGAGCTGTTTCTGAACCATGTACATACATGTTCTGAAACTTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp GATGAGAAAGTTTCAGAACATGTATGTACATGGTTCAGAAACAGCTCGGCTTTCCTTCTGCTAGAGAGCTaGTGCTGCTCTTGGAGAAGC +
Preference number: 4 (lower is better)
Translates to: DEKVSEHVCTWFRNSSAFLLLES*CCSWRS
Trigger: GCTTCTCCAAGAGCAGCACCAGCTCTCTAGCAGAAG...GAAAGCCGAGCTGTTTCTGAACCATGTACATACATGTTCTGAAACTTTCTCATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp TCGGCTTTCAAAAAGCTGTCAGCTCAGGTAGCACGCCTTGGTCTTGAATTCGGTTGTTCCACAATGTGCTaGAGGTACTCAACTGTAATT +
Preference number: 4 (lower is better)
Translates to: SAFKKLSAQVARLGLEFGCSTMC*RYSTVI
Trigger: AATTACAGTTGAGTACCTCCAGCACATTGTGGAACA...ACCGAATTCAAGACCAAGGCGTGCTACCTGAGCTGACAGCTTTTTGAAAGCCGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp TGCTGGCCAGTCTATCTTACACAAAGTTTTAAGTTTTCCTGGTGTCATAGTACTGTTGGAGAGAATCAGTaGAGTCAGGTCCCGCTCCAC +
Preference number: 4 (lower is better)
Translates to: CWPVYLTQSFKFSWCHSTVGENQ*SQVPLH
Trigger: GTGGAGCGGGACCTGACTCCACTGATTCTCTCCAAC...AGTACTATGACACCAGGAAAACTTAAAACTTTGTGTAAGATAGACTGGCCAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR CCA 90 bp ACCACAGAAAGGACTAGATATTCATACATGCGAGAGCACACTGAGACTGCATGTACTGCCAGAGGGCAATaGTGTGTTTTAACTGGCATC +
Preference number: 4 (lower is better)
Translates to: TTERTRYSYMREHTETACTARGQ*CVLTGI
Trigger: GATGCCAGTTAAAACACACCATTGCCCTCTGGCAGT...ACATGCAGTCTCAGTGTGCTCTCGCATGTATGAATATCTAGTCCTTTCTGTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp GAGTCCTGGACAAGCATTTTGTATTTTTGTAGTTCTCACTCCTTAGGCCCAATTCAATCTCTTTGGTCCTaGTGGTCCACGGTGCACATG +
Preference number: 4 (lower is better)
Translates to: ESWTSILYFCSSHSLGPIQSLWS*WSTVHM
Trigger: CATGTGCACCGTGGACCACCAGGACCAAAGAGATTG...AATTGGGCCTAAGGAGTGAGAACTACAAAAATACAAAATGCTTGTCCAGGACTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp GAGTCCTGGACAAGCATTTTGTATTTTTGTAGTTCTCACTCCTTAGGCCCAATTGTGCAGAACCGTGTCTaGGGAAATCTTTTGGCCACC +
Preference number: 4 (lower is better)
Translates to: ESWTSILYFCSSHSLGPIVQNRV*GNLLAT
Trigger: GGTGGCCAAAAGATTTCCCCAGACACGGTTCTGCAC...AATTGGGCCTAAGGAGTGAGAACTACAAAAATACAAAATGCTTGTCCAGGACTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp GAGTCCTGGACAAGCATTTTGTATTTTTGTAGTTCTCACTCCTTAGGCCCAATTTTATGGTGTCAGCATTaGTACCACCACGCCGCAGGT +
Preference number: 4 (lower is better)
Translates to: ESWTSILYFCSSHSLGPILWCQH*YHHAAG
Trigger: ACCTGCGGCGTGGTGGTACCAATGCTGACACCATAA...AATTGGGCCTAAGGAGTGAGAACTACAAAAATACAAAATGCTTGTCCAGGACTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp ACTGCGTGTGTGGCTGAGCTACAAGTCTCCTGGAATGTAAACAATGTTGGTTTATCAAGGCCAAGTTCTTaGCGATGGTTTTCCTCAGAG +
Preference number: 4 (lower is better)
Translates to: TACVAELQVSWNVNNVGLSRPSS*RWFSSE
Trigger: CTCTGAGGAAAACCATCGCCAAGAACTTGGCCTTGA...TAAACCAACATTGTTTACATTCCAGGAGACTTGTAGCTCAGCCACACACGCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp ACTGCGTGTGTGGCTGAGCTACAAGTCTCCTGGAATGTAAACAATGTTGGTTTAAAGAATTCCTTGTCCTaGCGCTTACACACCGTTTCG +
Preference number: 4 (lower is better)
Translates to: TACVAELQVSWNVNNVGLKNSLS*RLHTVS
Trigger: CGAAACGGTGTGTAAGCGCCAGGACAAGGAATTCTT...TAAACCAACATTGTTTACATTCCAGGAGACTTGTAGCTCAGCCACACACGCAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp TTTTTCCAGCTGGAAACGGGATTCGTAATGGTAATGGTTGAACTTAATGAACGTCTTCCTCTGAGCACTTaGCCTCGGGCAAATTGGCCA +
Preference number: 4 (lower is better)
Translates to: FFQLETGFVMVMVELNERLPLST*PRANWP
Trigger: TGGCCAATTTGCCCGAGGCCAAGTGCTCAGAGGAAG...ACGTTCATTAAGTTCAACCATTACCATTACGAATCCCGTTTCCAGCTGGAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR CCA 90 bp GATGAGAAAGTTTCAGAACATGTATGTACATGGTTCAGAAACAGCTCGGCTTTCGCTTCCCTGTGCGCTTaGGAAACAGCTGGAGAGAAT +
Preference number: 4 (lower is better)
Translates to: DEKVSEHVCTWFRNSSAFASLCA*ETAGEN
Trigger: ATTCTCTCCAGCTGTTTCCCAAGCGCACAGGGAAGC...GAAAGCCGAGCTGTTTCTGAACCATGTACATACATGTTCTGAAACTTTCTCATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp ATTAATAGTTGTGTCAGCATCTTTCTTAGACTGTTTTCCAGCAGGGTCTCAAAGCCAAGGGATGCCACCTaGTATCAGAGAGAAGCCACG +
Preference number: 4 (lower is better)
Translates to: INSCVSIFLRLFSSRVSKPRDAT*YQREAT
Trigger: CGTGGCTTCTCTCTGATACCAGGTGGCATCCCTTGG...CTTTGAGACCCTGCTGGAAAACAGTCTAAGAAAGATGCTGACACAACTATTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573038.1
CDS-3UTR CCA 90 bp GAGTCCTGGACAAGCATTTTGTATTTTTGTAGTTCTCACTCCTTAGGCCCAATTTCACTCATGGACCTGTaGCGATGGGGCAAAGATCGT +
Preference number: 4 (lower is better)
Translates to: ESWTSILYFCSSHSLGPISLMDL*RWGKDR
Trigger: ACGATCTTTGCCCCATCGCCACAGGTCCATGAGTGA...AATTGGGCCTAAGGAGTGAGAACTACAAAAATACAAAATGCTTGTCCAGGACTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR TCA 90 bp AGGAGGATGATGGCTAAAGGGGCCGGGTTTCTCTTTGAAGTGATGAAAATGCTCTTCTCTCTCATAAACTaGAGTAGGGAACTCGTATCT +
Preference number: 4 (lower is better)
Translates to: RRMMAKGAGFLFEVMKMLFSLIN*SRELVS
Trigger: AGATACGAGTTCCCTACTTCAGTTTATGAGAGAGAA...GAGCATTTTCATCACTTCAAAGAGAAACCCGGCCCCTTTAGCCATCATCCTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319921.4
CDS-3UTR TCA 90 bp TCGGCTTTCAAAAAGCTGTCAGCTCAGGTAGCACGCCTTGGTCTTGAATTCGGTGAAGACTGTTTGGACTaGATTATTTCCAGTTTCATC +
Preference number: 4 (lower is better)
Translates to: SAFKKLSAQVARLGLEFGEDCLD*IISSFI
Trigger: GATGAAACTGGAAATAATTCAGTCCAAACAGTCTTC...ACCGAATTCAAGACCAAGGCGTGCTACCTGAGCTGACAGCTTTTTGAAAGCCGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp AGAATGAATATTAAGGATACTGCCTCTAACATATCAATAGCTGTGCTGAGCTGTGGGGTTCCTCCTTTGTaGGCCTCCATTCCATGTCTC +
Preference number: 4 (lower is better)
Translates to: RMNIKDTASNISIAVLSCGVPPL*ASIPCL
Trigger: GAGACATGGAATGGAGGCTCACAAAGGAGGAACCCC...ACAGCTCAGCACAGCTATTGATATGTTAGAGGCAGTATCCTTAATATTCATTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp GGCATACGAACAATATCTCAACAAAGAGTTAACGAAAAAGGGAAAGGAAAACCTACACGCGCACGGCCGTaGTTCCATATGGAACACATG +
Preference number: 4 (lower is better)
Translates to: GIRTISQQRVNEKGKGKPTRARP*FHMEHM
Trigger: CATGTGTTCCATATGGAATCACGGCCGTGCGCGTGT...AGGTTTTCCTTTCCCTTTTTCGTTAACTCTTTGTTGAGATATTGTTCGTATGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000319921.4
CDS-3UTR TCA 90 bp TGCACTTTCCTGGCGCTTGTTTTTCCAGCTGGAAACGGGATTCGTAATGGTAATATTTGCAGGATGTCTTaGGTATACACATTCAGCTGC +
Preference number: 4 (lower is better)
Translates to: CTFLALVFPAGNGIRNGNICRMS*VYTFSC
Trigger: GCAGCTGAATGTGTATACTCAAGACATCCTGCAAAT...ATTACCATTACGAATCCCGTTTCCAGCTGGAAAAACAAGCGCCAGGAAAGTGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR TCA 90 bp GAAAGTTTCAGAACATGTATGTACATGGTTCAGAAACAGCTCGGCTTTCAAAAAAAAGGCACCAGTCCATaGTCAAGTCCACGCCGCAGA +
Preference number: 4 (lower is better)
Translates to: ESFRTCMYMVQKQLGFQKKGTSP*SSPRRR
Trigger: TCTGCGGCGTGGACTTGATCATGGACTGGTGCCTTT...TTTTTGAAAGCCGAGCTGTTTCTGAACCATGTACATACATGTTCTGAAACTTTC
44% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp GATGAGAAAGTTTCAGAACATGTATGTACATGGTTCAGAAACAGCTCGGCTTTCGCTTGTCCACCAGGCTaGACTCTGATAAGAGCATCA +
Preference number: 4 (lower is better)
Translates to: DEKVSEHVCTWFRNSSAFACPPG*TLIRAS
Trigger: TGATGCTCTTATCAGAGTTCAGCCTGGTGGACAAGC...GAAAGCCGAGCTGTTTCTGAACCATGTACATACATGTTCTGAAACTTTCTCATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp ACCACAGAAAGGACTAGATATTCATACATGCGAGAGCACACTGAGACTGCATGTAAAGTTCCGAAGCTCTaGCCAGGATGGGTTTATTAC +
Preference number: 4 (lower is better)
Translates to: TTERTRYSYMREHTETACKVPKL*PGWVYY
Trigger: GTAATAAACCCATCCTGGTCAGAGCTTCGGAACTTT...ACATGCAGTCTCAGTGTGCTCTCGCATGTATGAATATCTAGTCCTTTCTGTGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp ACTGCGTGTGTGGCTGAGCTACAAGTCTCCTGGAATGTAAACAATGTTGGTTTATTGTGTGGTCGTCATTaGAGAAAACGTATGGGTGAG +
Preference number: 4 (lower is better)
Translates to: TACVAELQVSWNVNNVGLLCGRH*RKRMGE
Trigger: CTCACCCATACGTTTTCTTCAATGACGACCACACAA...TAAACCAACATTGTTTACATTCCAGGAGACTTGTAGCTCAGCCACACACGCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp AGGACTAGATATTCATACATGCGAGAGCACACTGAGACTGCATGTTTATTTGGCAAGATGGTGTCCAACTaGTGTTGGTCCTTATTGGCG +
Preference number: 4 (lower is better)
Translates to: RTRYSYMREHTETACLFGKMVSN*CWSLLA
Trigger: CGCCAATAAGGACCAACATCAGTTGGACACCATCTT...GCCAAATAAACATGCAGTCTCAGTGTGCTCTCGCATGTATGAATATCTAGTCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp AGGACTAGATATTCATACATGCGAGAGCACACTGAGACTGCATGTTTATTTGGCCGTTTTCATCTAGGCTaGTGGACTCAACCAGTCTCT +
Preference number: 4 (lower is better)
Translates to: RTRYSYMREHTETACLFGRFHLG*WTQPVS
Trigger: AGAGACTGGTTGAGTCCATCAGCCTAGATGAAAACG...GCCAAATAAACATGCAGTCTCAGTGTGCTCTCGCATGTATGAATATCTAGTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp GATGAGAAAGTTTCAGAACATGTATGTACATGGTTCAGAAACAGCTCGGCTTTCAGAGGTTCTGCAGGTTaGGAAGCAACACCATCTTGC +
Preference number: 4 (lower is better)
Translates to: DEKVSEHVCTWFRNSSAFRGSAG*EATPSC
Trigger: GCAAGATGGTGTTGCTTCTCAACCTGCAGAACCTCT...GAAAGCCGAGCTGTTTCTGAACCATGTACATACATGTTCTGAAACTTTCTCATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp AGGACTAGATATTCATACATGCGAGAGCACACTGAGACTGCATGTTTATTTGGCTCTCCAGCACCGTGTTaGTATCCAGATAGTGCTTCT +
Preference number: 4 (lower is better)
Translates to: RTRYSYMREHTETACLFGSPAPC*YPDSAS
Trigger: AGAAGCACTATCTGGATATCAACACGGTGCTGGAGA...GCCAAATAAACATGCAGTCTCAGTGTGCTCTCGCATGTATGAATATCTAGTCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp ACCACAGAAAGGACTAGATATTCATACATGCGAGAGCACACTGAGACTGCATGTAAAATTTCACAGTCGTaGCTTGTTAGCAGCCTGGAG +
Preference number: 4 (lower is better)
Translates to: TTERTRYSYMREHTETACKISQS*LVSSLE
Trigger: CTCCAGGCTGCTAACAAGTCACGACTGTGAAATTTT...ACATGCAGTCTCAGTGTGCTCTCGCATGTATGAATATCTAGTCCTTTCTGTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp GTTCTAGACCACAGGTTTCTCGCCTGGAAGAACCTTTCCTTTTTGGAAGAGAAAAAAATTTCACAGTCGTaGCTTGTTAGCAGCCTGGAG +
Preference number: 4 (lower is better)
Translates to: VLDHRFLAWKNLSFLEEKKISQS*LVSSLE
Trigger: CTCCAGGCTGCTAACAAGTCACGACTGTGAAATTTT...TTTCTCTTCCAAAAAGGAAAGGTTCTTCCAGGCGAGAAACCTGTGGTCTAGAAC
44% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR TCA 90 bp GATGAGAAAGTTTCAGAACATGTATGTACATGGTTCAGAAACAGCTCGGCTTTCAACAGAATACTTAGCTaGGGCAATGAGCTGGGCGCT +
Preference number: 4 (lower is better)
Translates to: DEKVSEHVCTWFRNSSAFNRILS*GNELGA
Trigger: AGCGCCCAGCTCATTGCCTCAGCTAAGTATTCTGTT...GAAAGCCGAGCTGTTTCTGAACCATGTACATACATGTTCTGAAACTTTCTCATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp GAAAGTTTCAGAACATGTATGTACATGGTTCAGAAACAGCTCGGCTTTCAAAAAGAATCCCAAACCTGCTaGGGGTCTTGCTGGCTGTCT +
Preference number: 4 (lower is better)
Translates to: ESFRTCMYMVQKQLGFQKESQTC*GSCWLS
Trigger: AGACAGCCAGCAAGACCCTCAGCAGGTTTGGGATTC...TTTTTGAAAGCCGAGCTGTTTCTGAACCATGTACATACATGTTCTGAAACTTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp AGAATGAATATTAAGGATACTGCCTCTAACATATCAATAGCTGTGCTGAGCTGTGCGGAGCGTTGTCCTTaGAGCAAATGGTGGACACCA +
Preference number: 4 (lower is better)
Translates to: RMNIKDTASNISIAVLSCAERCP*SKWWTP
Trigger: TGGTGTCCACCATTTGCTTCAAGGACAACGCTCCGC...ACAGCTCAGCACAGCTATTGATATGTTAGAGGCAGTATCCTTAATATTCATTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp AGAAACAGCTCGGCTTTCAAAAAGCTGTCAGCTCAGGTAGCACGCCTTGGTCTTTATCCACAACATCATTaGATGGAGAGAGAGATTTTG +
Preference number: 4 (lower is better)
Translates to: RNSSAFKKLSAQVARLGLYPQHH*MEREIL
Trigger: CAAAATCTCTCTCTCCATTCAATGATGTTGTGGATA...AAGACCAAGGCGTGCTACCTGAGCTGACAGCTTTTTGAAAGCCGAGCTGTTTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp TTTGCTATTAATAGTTGTGTCAGCATCTTTCTTAGACTGTTTTCCAGCAGGGTCATCAAAAGGCGCTGCTaGTGGACTTGGCAGATCAGC +
Preference number: 4 (lower is better)
Translates to: FAINSCVSIFLRLFSSRVIKRRC*WTWQIS
Trigger: GCTGATCTGCCAAGTCCATCAGCAGCGCCTTTTGAT...GACCCTGCTGGAAAACAGTCTAAGAAAGATGCTGACACAACTATTAATAGCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000573038.1
CDS-3UTR GCA 90 bp GAGTCCTGGACAAGCATTTTGTATTTTTGTAGTTCTCACTCCTTAGGCCCAATTGAGTCGCTGGCAGCCTaGTATATACTACATGTCCTG +
Preference number: 4 (lower is better)
Translates to: ESWTSILYFCSSHSLGPIESLAA*YILHVL
Trigger: CAGGACATGTAGTATATAGCAGGCTGCCAGCGACTC...AATTGGGCCTAAGGAGTGAGAACTACAAAAATACAAAATGCTTGTCCAGGACTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp AGGACTAGATATTCATACATGCGAGAGCACACTGAGACTGCATGTTTATTTGGCGTTTTTCACAGCAGCTaGACTTCTGTTCTTCCCCTC +
Preference number: 4 (lower is better)
Translates to: RTRYSYMREHTETACLFGVFHSS*TSVLPL
Trigger: GAGGGGAAGAACAGAAGTGCAGCTGCTGTGAAAAAC...GCCAAATAAACATGCAGTCTCAGTGTGCTCTCGCATGTATGAATATCTAGTCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp AGGAGGATGATGGCTAAAGGGGCCGGGTTTCTCTTTGAAGTGATGAAAATGCTCTCTATGCTCAGCAAATaGTGCTTCTCTCTCATAAAC +
Preference number: 4 (lower is better)
Translates to: RRMMAKGAGFLFEVMKMLSMLSK*CFSLIN
Trigger: GTTTATGAGAGAGAAGCAGCATTTGCTGAGCATAGA...GAGCATTTTCATCACTTCAAAGAGAAACCCGGCCCCTTTAGCCATCATCCTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319921.4
CDS-3UTR GCA 90 bp AGAATGAATATTAAGGATACTGCCTCTAACATATCAATAGCTGTGCTGAGCTGTGACTCCTTCCAGCCATaGTCCGCGGGGAATTGGATT +
Preference number: 4 (lower is better)
Translates to: RMNIKDTASNISIAVLSCDSFQP*SAGNWI
Trigger: AATCCAATTCCCCGCGGAGCATGGCTGGAAGGAGTC...ACAGCTCAGCACAGCTATTGATATGTTAGAGGCAGTATCCTTAATATTCATTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp GGCATACGAACAATATCTCAACAAAGAGTTAACGAAAAAGGGAAAGGAAAACCTATCATGGCTCACTGCTaGCTTGACCTTCTGGGCCCA +
Preference number: 4 (lower is better)
Translates to: GIRTISQQRVNEKGKGKPIMAHC*LDLLGP
Trigger: TGGGCCCAGAAGGTCAAGGCAGCAGTGAGCCATGAT...AGGTTTTCCTTTCCCTTTTTCGTTAACTCTTTGTTGAGATATTGTTCGTATGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000319921.4
CDS-3UTR GCA 90 bp TCACAATTTCAAAATGTCAGATCAGAAGAATCTTTGGCGATTAATCCACTCTCCGTTGGAAGAAAAGCATaGGCCATGGTGGCTGGGGAG +
Preference number: 4 (lower is better)
Translates to: SQFQNVRSEESLAINPLSVGRKA*AMVAGE
Trigger: CTCCCCAGCCACCATGGCGCATGCTTTTCTTCCAAC...GGAGAGTGGATTAATCGCCAAAGATTCTTCTGATCTGACATTTTGAAATTGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp GAAAGTTTCAGAACATGTATGTACATGGTTCAGAAACAGCTCGGCTTTCAAAAACTGCTAGAGAGCTGGTaGTGCTCTTGGAGAAGCCTG +
Preference number: 4 (lower is better)
Translates to: ESFRTCMYMVQKQLGFQKLLESW*CSWRSL
Trigger: CAGGCTTCTCCAAGAGCAGCACCAGCTCTCTAGCAG...TTTTTGAAAGCCGAGCTGTTTCTGAACCATGTACATACATGTTCTGAAACTTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp GAGTCCTGGACAAGCATTTTGTATTTTTGTAGTTCTCACTCCTTAGGCCCAATTAGCTCTGCTTCCTTCTaGAGGAAATGCCAGAGGATG +
Preference number: 4 (lower is better)
Translates to: ESWTSILYFCSSHSLGPISSASF*RKCQRM
Trigger: CATCCTCTGGCATTTCCTGCAGAAGGAAGCAGAGCT...AATTGGGCCTAAGGAGTGAGAACTACAAAAATACAAAATGCTTGTCCAGGACTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp AGGACTAGATATTCATACATGCGAGAGCACACTGAGACTGCATGTTTATTTGGCGATCCAAGTCAGTGCTaGAGTAGTCTTTGGGTAGGT +
Preference number: 4 (lower is better)
Translates to: RTRYSYMREHTETACLFGDPSQC*SSLWVG
Trigger: ACCTACCCAAAGACTACTGCAGCACTGACTTGGATC...GCCAAATAAACATGCAGTCTCAGTGTGCTCTCGCATGTATGAATATCTAGTCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp AGGACTAGATATTCATACATGCGAGAGCACACTGAGACTGCATGTTTATTTGGCCAAAGGAGCTCCGAGTaGAAGTTGAAGACTTCAGCA +
Preference number: 4 (lower is better)
Translates to: RTRYSYMREHTETACLFGQRSSE*KLKTSA
Trigger: TGCTGAAGTCTTCAACTTGCACTCGGAGCTCCTTTG...GCCAAATAAACATGCAGTCTCAGTGTGCTCTCGCATGTATGAATATCTAGTCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp GATGAGAAAGTTTCAGAACATGTATGTACATGGTTCAGAAACAGCTCGGCTTTCGACGTGCTTGACATCTaGCAACGTGAGCAGATGCTT +
Preference number: 4 (lower is better)
Translates to: DEKVSEHVCTWFRNSSAFDVLDI*QREQML
Trigger: AAGCATCTGCTCACGTTGGCAGATGTCAAGCACGTC...GAAAGCCGAGCTGTTTCTGAACCATGTACATACATGTTCTGAAACTTTCTCATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp GATGAGAAAGTTTCAGAACATGTATGTACATGGTTCAGAAACAGCTCGGCTTTCTCAGGAAGGATCAAGTaGAGAACCGTGTCTGGGGAA +
Preference number: 4 (lower is better)
Translates to: DEKVSEHVCTWFRNSSAFSGRIK*RTVSGE
Trigger: TTCCCCAGACACGGTTCTGCACTTGATCCTTCCTGA...GAAAGCCGAGCTGTTTCTGAACCATGTACATACATGTTCTGAAACTTTCTCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp GCCAGCTCTGAGGTATCAAAGGAGCTCCGAGTGCAAGTTGAAGACTTCAGCAAGTTTTTCACGTTTAACTaGATCTTCATTTTGTCGTGC +
Preference number: 4 (lower is better)
Translates to: ASSEVSKELRVQVEDFSKFFTFN*IFILSC
Trigger: GCACGACAAAATGAAGATGCAGTTAAACGTGAAAAA...CTTGCTGAAGTCTTCAACTTGCACTCGGAGCTCCTTTGATACCTCAGAGCTGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp AGGACTAGATATTCATACATGCGAGAGCACACTGAGACTGCATGTTTATTTGGCATCATCTCCTCAGAGTaGTTCCGGTATGGATTGCAG +
Preference number: 4 (lower is better)
Translates to: RTRYSYMREHTETACLFGIISSE*FRYGLQ
Trigger: CTGCAATCCATACCGGAAGCACTCTGAGGAGATGAT...GCCAAATAAACATGCAGTCTCAGTGTGCTCTCGCATGTATGAATATCTAGTCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp TCACAATTTCAAAATGTCAGATCAGAAGAATCTTTGGCGATTAATCCACTCTCCGGACCTGCTTCAGGCTaGGGAAGAGATCTGAGTAGG +
Preference number: 4 (lower is better)
Translates to: SQFQNVRSEESLAINPLSGPASG*GRDLSR
Trigger: CCTACTCAGATCTCTTCCGCAGCCTGAAGCAGGTCC...GGAGAGTGGATTAATCGCCAAAGATTCTTCTGATCTGACATTTTGAAATTGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp GAGTCCTGGACAAGCATTTTGTATTTTTGTAGTTCTCACTCCTTAGGCCCAATTCTGCAGGATCTGCAGTaGCACGTAGTTTTTGGTCAG +
Preference number: 4 (lower is better)
Translates to: ESWTSILYFCSSHSLGPILQDLQ*HVVFGQ
Trigger: CTGACCAAAAACTACGTGGCACTGCAGATCCTGCAG...AATTGGGCCTAAGGAGTGAGAACTACAAAAATACAAAATGCTTGTCCAGGACTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp TCACAATTTCAAAATGTCAGATCAGAAGAATCTTTGGCGATTAATCCACTCTCCCCCTCGAAGAATGTCTaGTGCAGGATCTGCAGTGCC +
Preference number: 4 (lower is better)
Translates to: SQFQNVRSEESLAINPLSPSKNV*CRICSA
Trigger: GGCACTGCAGATCCTGCAGCAGACATTCTTCGAGGG...GGAGAGTGGATTAATCGCCAAAGATTCTTCTGATCTGACATTTTGAAATTGTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp TGCTGGCCAGTCTATCTTACACAAAGTTTTAAGTTTTCCTGGTGTCATAGTACTCTTGGGCAGTCCTTCTaGGTCTGTGATGTACTGAGC +
Preference number: 4 (lower is better)
Translates to: CWPVYLTQSFKFSWCHSTLGQSF*VCDVLS
Trigger: GCTCAGTACATCACAGACGCAGAAGGACTGCCCAAG...AGTACTATGACACCAGGAAAACTTAAAACTTTGTGTAAGATAGACTGGCCAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR GCA 90 bp AGAATGAATATTAAGGATACTGCCTCTAACATATCAATAGCTGTGCTGAGCTGTGCTGGGCAAGAAACCTaGCCAGAGGAGTCTGCTGAA +
Preference number: 4 (lower is better)
Translates to: RMNIKDTASNISIAVLSCAGQET*PEESAE
Trigger: TTCAGCAGACTCCTCTGGGCAGGTTTCTTGCCCAGC...ACAGCTCAGCACAGCTATTGATATGTTAGAGGCAGTATCCTTAATATTCATTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp CAATTTCAAAATGTCAGATCAGAAGAATCTTTGGCGATTAATCCACTCTCCATTGTTCCTAGGAGCACGTaGTCCACGAAGAGTGCGGTG +
Preference number: 4 (lower is better)
Translates to: QFQNVRSEESLAINPLSIVPRST*STKSAV
Trigger: CACCGCACTCTTCGTGGAGCACGTGCTCCTAGGAAC...AATGGAGAGTGGATTAATCGCCAAAGATTCTTCTGATCTGACATTTTGAAATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp TTTTTCCAGCTGGAAACGGGATTCGTAATGGTAATGGTTGAACTTAATGAACGTTGCTGGCTGTCTCCTTaGATTCACAGAGAGTGCGCA +
Preference number: 4 (lower is better)
Translates to: FFQLETGFVMVMVELNERCWLSP*IHRECA
Trigger: TGCGCACTCTCTGTGAATGCAAGGAGACAGCCAGCA...ACGTTCATTAAGTTCAACCATTACCATTACGAATCCCGTTTCCAGCTGGAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR GCA 90 bp GAGTCCTGGACAAGCATTTTGTATTTTTGTAGTTCTCACTCCTTAGGCCCAATTGCCAGCCACTTATGCTaGTGTTCTCTCAACCACTGT +
Preference number: 4 (lower is better)
Translates to: ESWTSILYFCSSHSLGPIASHLC*CSLNHC
Trigger: ACAGTGGTTGAGAGAACAGCAGCATAAGTGGCTGGC...AATTGGGCCTAAGGAGTGAGAACTACAAAAATACAAAATGCTTGTCCAGGACTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR GCA 90 bp TGCTGGCCAGTCTATCTTACACAAAGTTTTAAGTTTTCCTGGTGTCATAGTACTCTGCTGGTCTTTCCTTaGCTCTGCCAGCCACTTATG +
Preference number: 4 (lower is better)
Translates to: CWPVYLTQSFKFSWCHSTLLVFP*LCQPLM
Trigger: CATAAGTGGCTGGCAGAGGCAAGGAAAGACCAGCAG...AGTACTATGACACCAGGAAAACTTAAAACTTTGTGTAAGATAGACTGGCCAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR CCA 90 bp GATGAGAAAGTTTCAGAACATGTATGTACATGGTTCAGAAACAGCTCGGCTTTCAAGAGCAGGAGTCGCTaGCAGCCTGCTATATACTAC +
Preference number: 4 (lower is better)
Translates to: DEKVSEHVCTWFRNSSAFKSRSR*QPAIYY
Trigger: GTAGTATATAGCAGGCTGCCAGCGACTCCTGCTCTT...GAAAGCCGAGCTGTTTCTGAACCATGTACATACATGTTCTGAAACTTTCTCATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp GAGTCCTGGACAAGCATTTTGTATTTTTGTAGTTCTCACTCCTTAGGCCCAATTAAGAGCAGGAGTCGCTaGCAGCCTGCTATATACTAC +
Preference number: 4 (lower is better)
Translates to: ESWTSILYFCSSHSLGPIKSRSR*QPAIYY
Trigger: GTAGTATATAGCAGGCTGCCAGCGACTCCTGCTCTT...AATTGGGCCTAAGGAGTGAGAACTACAAAAATACAAAATGCTTGTCCAGGACTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp GAGTCCTGGACAAGCATTTTGTATTTTTGTAGTTCTCACTCCTTAGGCCCAATTAGGAGGAGTGGTTGCTaGTGGCTGTTTCATTCTCTG +
Preference number: 4 (lower is better)
Translates to: ESWTSILYFCSSHSLGPIRRSGC*WLFHSL
Trigger: CAGAGAATGAAACAGCCACCAGCAACCACTCCTCCT...AATTGGGCCTAAGGAGTGAGAACTACAAAAATACAAAATGCTTGTCCAGGACTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp ACCACAGAAAGGACTAGATATTCATACATGCGAGAGCACACTGAGACTGCATGTTTGGTCTCAGCTTCCTaGCAGTGTGTTTTGAAAGGA +
Preference number: 4 (lower is better)
Translates to: TTERTRYSYMREHTETACLVSAS*QCVLKG
Trigger: TCCTTTCAAAACACACTGCCAGGAAGCTGAGACCAA...ACATGCAGTCTCAGTGTGCTCTCGCATGTATGAATATCTAGTCCTTTCTGTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp ATGGCATACGAACAATATCTCAACAAAGAGTTAACGAAAAAGGGAAAGGAAAACGGAACACATGCAGGATaGTGCGAGCAGCAGGGACTG +
Preference number: 4 (lower is better)
Translates to: MAYEQYLNKELTKKGKENGTHAG*CEQQGL
Trigger: CAGTCCCTGCTGCTCGCACCATCCTGCATGTGTTCC...GTTTTCCTTTCCCTTTTTCGTTAACTCTTTGTTGAGATATTGTTCGTATGCCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000319921.4
CDS-3UTR CCA 90 bp TGCTGGCCAGTCTATCTTACACAAAGTTTTAAGTTTTCCTGGTGTCATAGTACTTCGGCCCCGGCTTGCTaGAGAATATGCCTTAAGGAA +
Preference number: 4 (lower is better)
Translates to: CWPVYLTQSFKFSWCHSTSAPAC*RICLKE
Trigger: TTCCTTAAGGCATATTCTCCAGCAAGCCGGGGCCGA...AGTACTATGACACCAGGAAAACTTAAAACTTTGTGTAAGATAGACTGGCCAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR CCA 90 bp TGCTGGCCAGTCTATCTTACACAAAGTTTTAAGTTTTCCTGGTGTCATAGTACTAGTCTTAATGCCCAGTaGCTTGCACTCGAGGACAGC +
Preference number: 4 (lower is better)
Translates to: CWPVYLTQSFKFSWCHSTSLNAQ*LALEDS
Trigger: GCTGTCCTCGAGTGCAAGCCACTGGGCATTAAGACT...AGTACTATGACACCAGGAAAACTTAAAACTTTGTGTAAGATAGACTGGCCAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR CCA 90 bp CAATTTCAAAATGTCAGATCAGAAGAATCTTTGGCGATTAATCCACTCTCCATTAGCTTCACATTGCTCTaGCGTGGGGTGGAGGCTTGC +
Preference number: 4 (lower is better)
Translates to: QFQNVRSEESLAINPLSISFTLL*RGVEAC
Trigger: GCAAGCCTCCACCCCACGCCAGAGCAATGTGAAGCT...AATGGAGAGTGGATTAATCGCCAAAGATTCTTCTGATCTGACATTTTGAAATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp TCACAATTTCAAAATGTCAGATCAGAAGAATCTTTGGCGATTAATCCACTCTCCCCCCGCCCTCAACAATaGCACAGAATTGTCCACGAG +
Preference number: 4 (lower is better)
Translates to: SQFQNVRSEESLAINPLSPRPQQ*HRIVHE
Trigger: CTCGTGGACAATTCTGTGCCATTGTTGAGGGCGGGG...GGAGAGTGGATTAATCGCCAAAGATTCTTCTGATCTGACATTTTGAAATTGTGA
44% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp CAATTTCAAAATGTCAGATCAGAAGAATCTTTGGCGATTAATCCACTCTCCATTAAGCATGCGCCATGGTaGCTGGGGAGAAGGCCAGAT +
Preference number: 4 (lower is better)
Translates to: QFQNVRSEESLAINPLSIKHAPW*LGRRPD
Trigger: ATCTGGCCTTCTCCCCAGCCACCATGGCGCATGCTT...AATGGAGAGTGGATTAATCGCCAAAGATTCTTCTGATCTGACATTTTGAAATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp CAATTTCAAAATGTCAGATCAGAAGAATCTTTGGCGATTAATCCACTCTCCATTCCCACGGAGCAAGGATaGCCGTTGGGACAAGTGTAC +
Preference number: 4 (lower is better)
Translates to: QFQNVRSEESLAINPLSIPTEQG*PLGQVY
Trigger: GTACACTTGTCCCAACGGCCATCCTTGCTCCGTGGG...AATGGAGAGTGGATTAATCGCCAAAGATTCTTCTGATCTGACATTTTGAAATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp GAAAGTTTCAGAACATGTATGTACATGGTTCAGAAACAGCTCGGCTTTCAAAAACCTCCAATCGGCGCATaGCAGTCAATGCAGATGCTC +
Preference number: 4 (lower is better)
Translates to: ESFRTCMYMVQKQLGFQKPPIGA*QSMQML
Trigger: GAGCATCTGCATTGACTGCCATGCGCCGATTGGAGG...TTTTTGAAAGCCGAGCTGTTTCTGAACCATGTACATACATGTTCTGAAACTTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp TGCTGGCCAGTCTATCTTACACAAAGTTTTAAGTTTTCCTGGTGTCATAGTACTATGTTTATCAGAGCCTaGGAACTCTGGGACGCTCCC +
Preference number: 4 (lower is better)
Translates to: CWPVYLTQSFKFSWCHSTMFIRA*ELWDAP
Trigger: GGGAGCGTCCCAGAGTTCCCAGGCTCTGATAAACAT...AGTACTATGACACCAGGAAAACTTAAAACTTTGTGTAAGATAGACTGGCCAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR CCA 90 bp TCGGCTTTCAAAAAGCTGTCAGCTCAGGTAGCACGCCTTGGTCTTGAATTCGGTTTTTGGATCCCTCACTaGAGGCTTAATGATGTTTAT +
Preference number: 4 (lower is better)
Translates to: SAFKKLSAQVARLGLEFGFWIPH*RLNDVY
Trigger: ATAAACATCATTAAGCCTCCAGTGAGGGATCCAAAA...ACCGAATTCAAGACCAAGGCGTGCTACCTGAGCTGACAGCTTTTTGAAAGCCGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp GCCAGCTCTGAGGTATCAAAGGAGCTCCGAGTGCAAGTTGAAGACTTCAGCAAGTTTTTCACATCATCGTaGGAACCCAGAAATATATGT +
Preference number: 4 (lower is better)
Translates to: ASSEVSKELRVQVEDFSKFFTSS*EPRNIC
Trigger: ACATATATTTCTGGGTTCCCACGATGATGTGAAAAA...CTTGCTGAAGTCTTCAACTTGCACTCGGAGCTCCTTTGATACCTCAGAGCTGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp TGCTGGCCAGTCTATCTTACACAAAGTTTTAAGTTTTCCTGGTGTCATAGTACTTCTCTTTGGTCCTGGTaGTCCACGGTGCACATGATC +
Preference number: 4 (lower is better)
Translates to: CWPVYLTQSFKFSWCHSTSLWSW*STVHMI
Trigger: GATCATGTGCACCGTGGACCACCAGGACCAAAGAGA...AGTACTATGACACCAGGAAAACTTAAAACTTTGTGTAAGATAGACTGGCCAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR CCA 90 bp AGGACTAGATATTCATACATGCGAGAGCACACTGAGACTGCATGTTTATTTGGCAAGAATTCCTTGTCCTaGCGCTTACACACCGTTTCG +
Preference number: 4 (lower is better)
Translates to: RTRYSYMREHTETACLFGKNSLS*RLHTVS
Trigger: CGAAACGGTGTGTAAGCGCCAGGACAAGGAATTCTT...GCCAAATAAACATGCAGTCTCAGTGTGCTCTCGCATGTATGAATATCTAGTCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp GAGTCCTGGACAAGCATTTTGTATTTTTGTAGTTCTCACTCCTTAGGCCCAATTAAAATCCGACTCCACTaGGCTCTGACTTCCCTGATG +
Preference number: 4 (lower is better)
Translates to: ESWTSILYFCSSHSLGPIKIRLH*ALTSLM
Trigger: CATCAGGGAAGTCAGAGCCCAGTGGAGTCGGATTTT...AATTGGGCCTAAGGAGTGAGAACTACAAAAATACAAAATGCTTGTCCAGGACTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp GAAAGTTTCAGAACATGTATGTACATGGTTCAGAAACAGCTCGGCTTTCAAAAACATCTCCCAGGCAGATaGAGCACGGCTGAATCCCAA +
Preference number: 4 (lower is better)
Translates to: ESFRTCMYMVQKQLGFQKHLPGR*STAESQ
Trigger: TTGGGATTCAGCCGTGCTCCATCTGCCTGGGAGATG...TTTTTGAAAGCCGAGCTGTTTCTGAACCATGTACATACATGTTCTGAAACTTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp AGAATGAATATTAAGGATACTGCCTCTAACATATCAATAGCTGTGCTGAGCTGTTGGGTTCTGAGGAAGTaGCTGTCCTCTGGGTTGAGG +
Preference number: 4 (lower is better)
Translates to: RMNIKDTASNISIAVLSCWVLRK*LSSGLR
Trigger: CCTCAACCCAGAGGACAGCCACTTCCTCAGAACCCA...ACAGCTCAGCACAGCTATTGATATGTTAGAGGCAGTATCCTTAATATTCATTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582970.5
3UTR CAA 72 bp GCTCACTGTGAGGGGAGAGGGTCAGATCTTGTTAGTTaGATCTTAAGGCACTCACAAAATGCCCTGATTTTT +
Preference number: 4 (lower is better)
Translates to: AHCEGRGSDLVS*ILRHSQNALIF
Trigger: AAAAATCAGGGCATTTTGTGAGTGCCTTAAGATCAAACTAACAAGATCTGACCCTCTCCCCTCACAGTGAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
3UTR CAA 72 bp CTCAAGGTGTGCATGGCTGAGTCCTGGACAAGCATTTaGTATTTTTGTAGTTCTCACTCCTTAGGCCCAATT +
Preference number: 4 (lower is better)
Translates to: LKVCMAESWTSI*YFCSSHSLGPI
Trigger: AATTGGGCCTAAGGAGTGAGAACTACAAAAATACAAAATGCTTGTCCAGGACTCAGCCATGCACACCTTGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp GATGAGAAAGTTTCAGAACATGTATGTACATGGTTCAGAAACAGCTCGGCTTTCAGCTCACGGCTTCAATaGTGCATTTCTCGAAGGTCT +
Preference number: 4 (lower is better)
Translates to: DEKVSEHVCTWFRNSSAFSSRLQ*CISRRS
Trigger: AGACCTTCGAGAAATGCATCATTGAAGCCGTGAGCT...GAAAGCCGAGCTGTTTCTGAACCATGTACATACATGTTCTGAAACTTTCTCATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp GATGAGAAAGTTTCAGAACATGTATGTACATGGTTCAGAAACAGCTCGGCTTTCAAGGCAACACGTCAGTaGGAAAAGCAGCACAAGATC +
Preference number: 4 (lower is better)
Translates to: DEKVSEHVCTWFRNSSAFKATRQ*EKQHKI
Trigger: GATCTTGTGCTGCTTTTCTCACTGACGTGTTGCCTT...GAAAGCCGAGCTGTTTCTGAACCATGTACATACATGTTCTGAAACTTTCTCATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp TCACAATTTCAAAATGTCAGATCAGAAGAATCTTTGGCGATTAATCCACTCTCCATGCCAGGGACTGTGTaGAGTCAGTTACTGCCTGCA +
Preference number: 4 (lower is better)
Translates to: SQFQNVRSEESLAINPLSMPGTV*SQLLPA
Trigger: TGCAGGCAGTAACTGACTTCACACAGTCCCTGGCAT...GGAGAGTGGATTAATCGCCAAAGATTCTTCTGATCTGACATTTTGAAATTGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp CAATTTCAAAATGTCAGATCAGAAGAATCTTTGGCGATTAATCCACTCTCCATTGCTCCGAGTGCAAGTTaGAGACTTCAGCAAGCCAGC +
Preference number: 4 (lower is better)
Translates to: QFQNVRSEESLAINPLSIAPSAS*RLQQAS
Trigger: GCTGGCTTGCTGAAGTCTTCAACTTGCACTCGGAGC...AATGGAGAGTGGATTAATCGCCAAAGATTCTTCTGATCTGACATTTTGAAATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp CAATTTCAAAATGTCAGATCAGAAGAATCTTTGGCGATTAATCCACTCTCCATTAAGAAAACGTATGGGTaGGGCTCCGACTCCCACCTC +
Preference number: 4 (lower is better)
Translates to: QFQNVRSEESLAINPLSIKKTYG*GSDSHL
Trigger: GAGGTGGGAGTCGGAGCCTCACCCATACGTTTTCTT...AATGGAGAGTGGATTAATCGCCAAAGATTCTTCTGATCTGACATTTTGAAATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp TCACAATTTCAAAATGTCAGATCAGAAGAATCTTTGGCGATTAATCCACTCTCCACCTTCCCAGTCAAGTaGCTGATGGCATCGACACTG +
Preference number: 4 (lower is better)
Translates to: SQFQNVRSEESLAINPLSTFPVK*LMASTL
Trigger: CAGTGTCGATGCCATCAGTCACTTGACTGGGAAGGT...GGAGAGTGGATTAATCGCCAAAGATTCTTCTGATCTGACATTTTGAAATTGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp GAAAGTTTCAGAACATGTATGTACATGGTTCAGAAACAGCTCGGCTTTCAAAAAAACCACTCCAGAGGGTaGAACTGGCTCTCTTCTTGC +
Preference number: 4 (lower is better)
Translates to: ESFRTCMYMVQKQLGFQKNHSRG*NWLSSC
Trigger: GCAAGAAGAGAGCCAGTTTCACCCTCTGGAGTGGTT...TTTTTGAAAGCCGAGCTGTTTCTGAACCATGTACATACATGTTCTGAAACTTTC
43% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp GAAAGTTTCAGAACATGTATGTACATGGTTCAGAAACAGCTCGGCTTTCAAAAACCCAGAGGAGTCTGCTaGAAGATGTCCACGAACTTC +
Preference number: 4 (lower is better)
Translates to: ESFRTCMYMVQKQLGFQKPRGVC*KMSTNF
Trigger: GAAGTTCGTGGACATCTTTCAGCAGACTCCTCTGGG...TTTTTGAAAGCCGAGCTGTTTCTGAACCATGTACATACATGTTCTGAAACTTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp TTTTTCCAGCTGGAAACGGGATTCGTAATGGTAATGGTTGAACTTAATGAACGTATCCTGCAGAGAGGGTaGTTAGGTGTGACTTCTGAC +
Preference number: 4 (lower is better)
Translates to: FFQLETGFVMVMVELNERILQRG*LGVTSD
Trigger: GTCAGAAGTCACACCTAATCACCCTCTCTGCAGGAT...ACGTTCATTAAGTTCAACCATTACCATTACGAATCCCGTTTCCAGCTGGAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR TCA 90 bp AGAATGAATATTAAGGATACTGCCTCTAACATATCAATAGCTGTGCTGAGCTGTCACAGACGAGGAAACTaGAGCTTAGAGAGGTCGAGC +
Preference number: 4 (lower is better)
Translates to: RMNIKDTASNISIAVLSCHRRGN*SLERSS
Trigger: GCTCGACCTCTCTAAGCTTCAGTTTCCTCGTCTGTG...ACAGCTCAGCACAGCTATTGATATGTTAGAGGCAGTATCCTTAATATTCATTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR GCA 90 bp CAATTTCAAAATGTCAGATCAGAAGAATCTTTGGCGATTAATCCACTCTCCATTTCTCTCCGCACTGGCTaGAGAACTTGGGGGTTTCCT +
Preference number: 4 (lower is better)
Translates to: QFQNVRSEESLAINPLSISLRTG*RTWGFP
Trigger: AGGAAACCCCCAAGTTCTGCAGCCAGTGCGGAGAGA...AATGGAGAGTGGATTAATCGCCAAAGATTCTTCTGATCTGACATTTTGAAATTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp ACCACAGAAAGGACTAGATATTCATACATGCGAGAGCACACTGAGACTGCATGTGGTGCTTCTTGGAAATaGAGACAATGCCTTCAACAA +
Preference number: 4 (lower is better)
Translates to: TTERTRYSYMREHTETACGASWK*RQCLQQ
Trigger: TTGTTGAAGGCATTGTCTGCATTTCCAAGAAGCACC...ACATGCAGTCTCAGTGTGCTCTCGCATGTATGAATATCTAGTCCTTTCTGTGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp ATGGCATACGAACAATATCTCAACAAAGAGTTAACGAAAAAGGGAAAGGAAAACATGGTGTCCCAGGTCTaGAGGATGCTGAAGGTGCTG +
Preference number: 4 (lower is better)
Translates to: MAYEQYLNKELTKKGKENMVSQV*RMLKVL
Trigger: CAGCACCTTCAGCATCCTGCAGACCTGGGACACCAT...GTTTTCCTTTCCCTTTTTCGTTAACTCTTTGTTGAGATATTGTTCGTATGCCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000319921.4
CDS-3UTR GCA 90 bp GAGTCCTGGACAAGCATTTTGTATTTTTGTAGTTCTCACTCCTTAGGCCCAATTAGGTCCTTCAGGATGTaGTGCTGCAGAAAGCCTTTT +
Preference number: 4 (lower is better)
Translates to: ESWTSILYFCSSHSLGPIRSFRM*CCRKPF
Trigger: AAAAGGCTTTCTGCAGCAGCACATCCTGAAGGACCT...AATTGGGCCTAAGGAGTGAGAACTACAAAAATACAAAATGCTTGTCCAGGACTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp TTTTTCCAGCTGGAAACGGGATTCGTAATGGTAATGGTTGAACTTAATGAACGTTACCAGCCTCAGCTCTaGTTCCTTCTGCAGGAAATG +
Preference number: 4 (lower is better)
Translates to: FFQLETGFVMVMVELNERYQPQL*FLLQEM
Trigger: CATTTCCTGCAGAAGGAAGCAGAGCTGAGGCTGGTA...ACGTTCATTAAGTTCAACCATTACCATTACGAATCCCGTTTCCAGCTGGAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR GCA 90 bp GATGAGAAAGTTTCAGAACATGTATGTACATGGTTCAGAAACAGCTCGGCTTTCGAGCTGTATTCAACTTaGTGGACGTTCTGGAACTGC +
Preference number: 4 (lower is better)
Translates to: DEKVSEHVCTWFRNSSAFELYST*WTFWNC
Trigger: GCAGTTCCAGAACGTCCAGCAAGTTGAATACAGCTC...GAAAGCCGAGCTGTTTCTGAACCATGTACATACATGTTCTGAAACTTTCTCATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp AGGACTAGATATTCATACATGCGAGAGCACACTGAGACTGCATGTTTATTTGGCTCACAGATGACTAAATaGCAGGGACTGTGTGAAGTC +
Preference number: 4 (lower is better)
Translates to: RTRYSYMREHTETACLFGSQMTK*QGLCEV
Trigger: GACTTCACACAGTCCCTGGCATTTAGTCATCTGTGA...GCCAAATAAACATGCAGTCTCAGTGTGCTCTCGCATGTATGAATATCTAGTCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp GAAAGTTTCAGAACATGTATGTACATGGTTCAGAAACAGCTCGGCTTTCAAAAAAGGCTCTCTTTGACCTaGAAGATGACCTTGGCTGCG +
Preference number: 4 (lower is better)
Translates to: ESFRTCMYMVQKQLGFQKRLSLT*KMTLAA
Trigger: CGCAGCCAAGGTCATCTTGCAGGTCAAAGAGAGCCT...TTTTTGAAAGCCGAGCTGTTTCTGAACCATGTACATACATGTTCTGAAACTTTC
43% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp GAGTCCTGGACAAGCATTTTGTATTTTTGTAGTTCTCACTCCTTAGGCCCAATTGTAAACCAGCTGCTCTaGCGTGTAGAAGTTCAGGTA +
Preference number: 4 (lower is better)
Translates to: ESWTSILYFCSSHSLGPIVNQLL*RVEVQV
Trigger: TACCTGAACTTCTACACGGCAGAGCAGCTGGTTTAC...AATTGGGCCTAAGGAGTGAGAACTACAAAAATACAAAATGCTTGTCCAGGACTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp AGAATGAATATTAAGGATACTGCCTCTAACATATCAATAGCTGTGCTGAGCTGTCTCGGTGCTGCTGCGTaGACAGATTGTGGAAAAGCT +
Preference number: 4 (lower is better)
Translates to: RMNIKDTASNISIAVLSCLGAAA*TDCGKA
Trigger: AGCTTTTCCACAATCTGTGCACGCAGCAGCACCGAG...ACAGCTCAGCACAGCTATTGATATGTTAGAGGCAGTATCCTTAATATTCATTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp TTTTTCCAGCTGGAAACGGGATTCGTAATGGTAATGGTTGAACTTAATGAACGTCCGTTGATGTTGGGCTaGAGATGGAAGCCGATGAAT +
Preference number: 4 (lower is better)
Translates to: FFQLETGFVMVMVELNERPLMLG*RWKPMN
Trigger: ATTCATCGGCTTCCATCTGCAGCCCAACATCAACGG...ACGTTCATTAAGTTCAACCATTACCATTACGAATCCCGTTTCCAGCTGGAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR GCA 90 bp TTTTTCCAGCTGGAAACGGGATTCGTAATGGTAATGGTTGAACTTAATGAACGTCTGATGGTGACATGCTaGAGCCTGGTCACATCAGAA +
Preference number: 4 (lower is better)
Translates to: FFQLETGFVMVMVELNERLMVTC*SLVTSE
Trigger: TTCTGATGTGACCAGGCTGCAGCATGTCACCATCAG...ACGTTCATTAAGTTCAACCATTACCATTACGAATCCCGTTTCCAGCTGGAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR GCA 90 bp TCACAATTTCAAAATGTCAGATCAGAAGAATCTTTGGCGATTAATCCACTCTCCGTGCTCCACGAAGAGTaGGGTGGAGAAAATCCGACT +
Preference number: 4 (lower is better)
Translates to: SQFQNVRSEESLAINPLSVLHEE*GGENPT
Trigger: AGTCGGATTTTCTCCACCGCACTCTTCGTGGAGCAC...GGAGAGTGGATTAATCGCCAAAGATTCTTCTGATCTGACATTTTGAAATTGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp AGAATGAATATTAAGGATACTGCCTCTAACATATCAATAGCTGTGCTGAGCTGTTCTAGTAAGAAGACGTaGTCGGTCACCAGCCCCTGT +
Preference number: 4 (lower is better)
Translates to: RMNIKDTASNISIAVLSCSSKKT*SVTSPC
Trigger: ACAGGGGCTGGTGACCGAGCACGTCTTCTTACTAGA...ACAGCTCAGCACAGCTATTGATATGTTAGAGGCAGTATCCTTAATATTCATTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp CAATTTCAAAATGTCAGATCAGAAGAATCTTTGGCGATTAATCCACTCTCCATTACAGACGGGGTCCTTTaGATCTCCCAGGCAGATGGA +
Preference number: 4 (lower is better)
Translates to: QFQNVRSEESLAINPLSITDGVL*ISQADG
Trigger: TCCATCTGCCTGGGAGATGCAAAGGACCCCGTCTGT...AATGGAGAGTGGATTAATCGCCAAAGATTCTTCTGATCTGACATTTTGAAATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp GAAAGTTTCAGAACATGTATGTACATGGTTCAGAAACAGCTCGGCTTTCAAAAATCAATGGCTTCCCTGTaGGCTTGGGAAACAGCTGGA +
Preference number: 4 (lower is better)
Translates to: ESFRTCMYMVQKQLGFQKSMASL*AWETAG
Trigger: TCCAGCTGTTTCCCAAGCGCACAGGGAAGCCATTGA...TTTTTGAAAGCCGAGCTGTTTCTGAACCATGTACATACATGTTCTGAAACTTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp TTTTTCCAGCTGGAAACGGGATTCGTAATGGTAATGGTTGAACTTAATGAACGTTGTAGCAGGACAAGCTaGAGAGAAAACCCCTCAGAC +
Preference number: 4 (lower is better)
Translates to: FFQLETGFVMVMVELNERCSRTS*RENPSD
Trigger: GTCTGAGGGGTTTTCTCTGCAGCTTGTCCTGCTACA...ACGTTCATTAAGTTCAACCATTACCATTACGAATCCCGTTTCCAGCTGGAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR CCA 90 bp GTCTCTTCTAAAAATACAAAAGGAACCGAGTGTGGCGGCACATTGTTCTTTAAATCTTCAGTCCTAGAATaGCCTTCACCAGCAGAGGTG +
Preference number: 4 (lower is better)
Translates to: VSSKNTKGTECGGTLFFKSSVLE*PSPAEV
Trigger: CACCTCTGCTGGTGAAGGCCATTCTAGGACTGAAGA...TTTAAAGAACAATGTGCCGCCACACTCGGTTCCTTTTGTATTTTTAGAAGAGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000319921.4
CDS-3UTR CCA 90 bp GTCTCTTCTAAAAATACAAAAGGAACCGAGTGTGGCGGCACATTGTTCTTTAAAAGGAGGAGTGGTTGCTaGTGGCTGTTTCATTCTCTG +
Preference number: 4 (lower is better)
Translates to: VSSKNTKGTECGGTLFFKRRSGC*WLFHSL
Trigger: CAGAGAATGAAACAGCCACCAGCAACCACTCCTCCT...TTTAAAGAACAATGTGCCGCCACACTCGGTTCCTTTTGTATTTTTAGAAGAGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000319921.4
CDS-3UTR CCA 90 bp GGCATACGAACAATATCTCAACAAAGAGTTAACGAAAAAGGGAAAGGAAAACCTTCTCGTCCTTGGTCTTaGTCTCAGCTTCCTGGCAGT +
Preference number: 4 (lower is better)
Translates to: GIRTISQQRVNEKGKGKPSRPWS*SQLPGS
Trigger: ACTGCCAGGAAGCTGAGACCAAGACCAAGGACGAGA...AGGTTTTCCTTTCCCTTTTTCGTTAACTCTTTGTTGAGATATTGTTCGTATGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000319921.4
CDS-3UTR CCA 90 bp AGAATGAATATTAAGGATACTGCCTCTAACATATCAATAGCTGTGCTGAGCTGTCAGCCATCTCGTCCTTaGTCTTGGTCTCAGCTTCCT +
Preference number: 4 (lower is better)
Translates to: RMNIKDTASNISIAVLSCQPSRP*SWSQLP
Trigger: AGGAAGCTGAGACCAAGACCAAGGACGAGATGGCTG...ACAGCTCAGCACAGCTATTGATATGTTAGAGGCAGTATCCTTAATATTCATTCT
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp GAAAGTTTCAGAACATGTATGTACATGGTTCAGAAACAGCTCGGCTTTCAAAAATCGGCCCCGGCTTGCTaGAGAATATGCCTTAAGGAA +
Preference number: 4 (lower is better)
Translates to: ESFRTCMYMVQKQLGFQKSAPAC*RICLKE
Trigger: TTCCTTAAGGCATATTCTCCAGCAAGCCGGGGCCGA...TTTTTGAAAGCCGAGCTGTTTCTGAACCATGTACATACATGTTCTGAAACTTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp AGAATGAATATTAAGGATACTGCCTCTAACATATCAATAGCTGTGCTGAGCTGTCCCTTCATCAGACACTaGTGGCACCATGACAGTGAG +
Preference number: 4 (lower is better)
Translates to: RMNIKDTASNISIAVLSCPFIRH*WHHDSE
Trigger: CTCACTGTCATGGTGCCACCAGTGTCTGATGAAGGG...ACAGCTCAGCACAGCTATTGATATGTTAGAGGCAGTATCCTTAATATTCATTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp AGAATGAATATTAAGGATACTGCCTCTAACATATCAATAGCTGTGCTGAGCTGTGATGTAGCTCCTTCTTaGACGGTCCAGGAGGCTTTG +
Preference number: 4 (lower is better)
Translates to: RMNIKDTASNISIAVLSCDVAPS*TVQEAL
Trigger: CAAAGCCTCCTGGACCGTCCAAGAAGGAGCTACATC...ACAGCTCAGCACAGCTATTGATATGTTAGAGGCAGTATCCTTAATATTCATTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508628.6
CDS-3UTR CCA 90 bp AGAATGAATATTAAGGATACTGCCTCTAACATATCAATAGCTGTGCTGAGCTGTGCCATTCCAAGTTCCTaGCGGAGTCACACAGTTTCC +
Preference number: 4 (lower is better)
Translates to: RMNIKDTASNISIAVLSCAIPSS*RSHTVS
Trigger: GGAAACTGTGTGACTCCGCCAGGAACTTGGAATGGC...ACAGCTCAGCACAGCTATTGATATGTTAGAGGCAGTATCCTTAATATTCATTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp TCACAATTTCAAAATGTCAGATCAGAAGAATCTTTGGCGATTAATCCACTCTCCTGCGTGCACAGATTGTaGAAAAGCTCCTCCGCTTGG +
Preference number: 4 (lower is better)
Translates to: SQFQNVRSEESLAINPLSCVHRL*KSSSAW
Trigger: CCAAGCGGAGGAGCTTTTCCACAATCTGTGCACGCA...GGAGAGTGGATTAATCGCCAAAGATTCTTCTGATCTGACATTTTGAAATTGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp TGCTGGCCAGTCTATCTTACACAAAGTTTTAAGTTTTCCTGGTGTCATAGTACTATCGCGCTGTGCTCGTaGAACCACCTGAAAACTTTC +
Preference number: 4 (lower is better)
Translates to: CWPVYLTQSFKFSWCHSTIALCS*NHLKTF
Trigger: GAAAGTTTTCAGGTGGTTCCACGAGCACAGCGCGAT...AGTACTATGACACCAGGAAAACTTAAAACTTTGTGTAAGATAGACTGGCCAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR CCA 90 bp GATGAGAAAGTTTCAGAACATGTATGTACATGGTTCAGAAACAGCTCGGCTTTCGTTTCGGAAAGAACCTaGCGATGGCTTTCCGATATG +
Preference number: 4 (lower is better)
Translates to: DEKVSEHVCTWFRNSSAFVSERT*RWLSDM
Trigger: CATATCGGAAAGCCATCGCCAGGTTCTTTCCGAAAC...GAAAGCCGAGCTGTTTCTGAACCATGTACATACATGTTCTGAAACTTTCTCATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp CAATTTCAAAATGTCAGATCAGAAGAATCTTTGGCGATTAATCCACTCTCCATTGCTGAGGCAATGAGCTaGGCGCTACGGATTCCATCT +
Preference number: 4 (lower is better)
Translates to: QFQNVRSEESLAINPLSIAEAMS*ALRIPS
Trigger: AGATGGAATCCGTAGCGCCCAGCTCATTGCCTCAGC...AATGGAGAGTGGATTAATCGCCAAAGATTCTTCTGATCTGACATTTTGAAATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp GATGAGAAAGTTTCAGAACATGTATGTACATGGTTCAGAAACAGCTCGGCTTTCGGAAATGCACTTTCCTaGCGCTTGTTTTTCCAGCTG +
Preference number: 4 (lower is better)
Translates to: DEKVSEHVCTWFRNSSAFGNALS*RLFFQL
Trigger: CAGCTGGAAAAACAAGCGCCAGGAAAGTGCATTTCC...GAAAGCCGAGCTGTTTCTGAACCATGTACATACATGTTCTGAAACTTTCTCATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR TCA 90 bp ATGGCATACGAACAATATCTCAACAAAGAGTTAACGAAAAAGGGAAAGGAAAACCTGAGGCCACGGGTTTaGAAGCAAAGTCAGGTGACA +
Preference number: 4 (lower is better)
Translates to: MAYEQYLNKELTKKGKENLRPRV*KQSQVT
Trigger: TGTCACCTGACTTTGCTTTCAAACCCGTGGCCTCAG...GTTTTCCTTTCCCTTTTTCGTTAACTCTTTGTTGAGATATTGTTCGTATGCCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000319921.4
CDS-3UTR TCA 90 bp TCACAATTTCAAAATGTCAGATCAGAAGAATCTTTGGCGATTAATCCACTCTCCGGAAATGAAGAGAGATaGTGGCGTGGAAGAACACGG +
Preference number: 4 (lower is better)
Translates to: SQFQNVRSEESLAINPLSGNEER*WRGRTR
Trigger: CCGTGTTCTTCCACGCCATCATCTCTCTTCATTTCC...GGAGAGTGGATTAATCGCCAAAGATTCTTCTGATCTGACATTTTGAAATTGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp TGCACTTTCCTGGCGCTTGTTTTTCCAGCTGGAAACGGGATTCGTAATGGTAATGCTGGTGCTTGTAAATaGACTCATACTCAAAAGATT +
Preference number: 4 (lower is better)
Translates to: CTFLALVFPAGNGIRNGNAGACK*THTQKI
Trigger: AATCTTTTGAGTATGAGTTCATTTACAAGCACCAGC...ATTACCATTACGAATCCCGTTTCCAGCTGGAAAAACAAGCGCCAGGAAAGTGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR TCA 90 bp GTCTCTTCTAAAAATACAAAAGGAACCGAGTGTGGCGGCACATTGTTCTTTAAAAGCTCACGGCTTCAATaGTGCATTTCTCGAAGGTCT +
Preference number: 4 (lower is better)
Translates to: VSSKNTKGTECGGTLFFKSSRLQ*CISRRS
Trigger: AGACCTTCGAGAAATGCATCATTGAAGCCGTGAGCT...TTTAAAGAACAATGTGCCGCCACACTCGGTTCCTTTTGTATTTTTAGAAGAGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000319921.4
CDS-3UTR TCA 90 bp GTCTCTTCTAAAAATACAAAAGGAACCGAGTGTGGCGGCACATTGTTCTTTAAAGACTGTACATATCTGTaGCTACCCCAAAACCTGCTG +
Preference number: 4 (lower is better)
Translates to: VSSKNTKGTECGGTLFFKDCTYL*LPQNLL
Trigger: CAGCAGGTTTTGGGGTAGTCACAGATATGTACAGTC...TTTAAAGAACAATGTGCCGCCACACTCGGTTCCTTTTGTATTTTTAGAAGAGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000319921.4
CDS-3UTR TCA 90 bp GAAAGTTTCAGAACATGTATGTACATGGTTCAGAAACAGCTCGGCTTTCAAAAAGGATACAGAACTGCTTaGCTTGCTGCAGGTAGCACT +
Preference number: 4 (lower is better)
Translates to: ESFRTCMYMVQKQLGFQKGYRTA*LAAGST
Trigger: AGTGCTACCTGCAGCAAGTCAAGCAGTTCTGTATCC...TTTTTGAAAGCCGAGCTGTTTCTGAACCATGTACATACATGTTCTGAAACTTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp TTTTTCCAGCTGGAAACGGGATTCGTAATGGTAATGGTTGAACTTAATGAACGTCATGCGAGAGCACACTaGGACTGCATGTTTATTTGG +
Preference number: 4 (lower is better)
Translates to: FFQLETGFVMVMVELNERHARAH*DCMFIW
Trigger: CCAAATAAACATGCAGTCTCAGTGTGCTCTCGCATG...ACGTTCATTAAGTTCAACCATTACCATTACGAATCCCGTTTCCAGCTGGAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR TCA 90 bp GTTCTAGACCACAGGTTTCTCGCCTGGAAGAACCTTTCCTTTTTGGAAGAGAAACATGATCTTAAGTTCTaGATCCAGGTCCGTGTATTT +
Preference number: 4 (lower is better)
Translates to: VLDHRFLAWKNLSFLEEKHDLKF*IQVRVF
Trigger: AAATACACGGACCTGGATTCAGAACTTAAGATCATG...TTTCTCTTCCAAAAAGGAAAGGTTCTTCCAGGCGAGAAACCTGTGGTCTAGAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR TCA 90 bp AGAATGAATATTAAGGATACTGCCTCTAACATATCAATAGCTGTGCTGAGCTGTCGTTCCACAGACCCATaGCTCTCATTCACAGTCTTC +
Preference number: 4 (lower is better)
Translates to: RMNIKDTASNISIAVLSCRSTDP*LSFTVF
Trigger: GAAGACTGTGAATGAGAGTCATGGGTCTGTGGAACG...ACAGCTCAGCACAGCTATTGATATGTTAGAGGCAGTATCCTTAATATTCATTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp TGCTGGCCAGTCTATCTTACACAAAGTTTTAAGTTTTCCTGGTGTCATAGTACTGCATATTGTCGGTTGTaGGCTCATACGTTTTGTCGG +
Preference number: 4 (lower is better)
Translates to: CWPVYLTQSFKFSWCHSTAYCRL*AHTFCR
Trigger: CCGACAAAACGTATGAGCTCACAACCGACAATATGC...AGTACTATGACACCAGGAAAACTTAAAACTTTGTGTAAGATAGACTGGCCAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR TCA 90 bp CAATTTCAAAATGTCAGATCAGAAGAATCTTTGGCGATTAATCCACTCTCCATTGTAGCCCAAACCAGCTaGCTCCAAACGGCAGATCAT +
Preference number: 4 (lower is better)
Translates to: QFQNVRSEESLAINPLSIVAQTS*LQTADH
Trigger: ATGATCTGCCGTTTGGAGTCAGCTGGTTTGGGCTAC...AATGGAGAGTGGATTAATCGCCAAAGATTCTTCTGATCTGACATTTTGAAATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp TGCTGGCCAGTCTATCTTACACAAAGTTTTAAGTTTTCCTGGTGTCATAGTACTAGATCTTCACACGATTaGTGTTTCTGCAGAGCTGGG +
Preference number: 4 (lower is better)
Translates to: CWPVYLTQSFKFSWCHSTRSSHD*CFCRAG
Trigger: CCCAGCTCTGCAGAAACATCAATCGTGTGAAGATCT...AGTACTATGACACCAGGAAAACTTAAAACTTTGTGTAAGATAGACTGGCCAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR TCA 90 bp TCACAATTTCAAAATGTCAGATCAGAAGAATCTTTGGCGATTAATCCACTCTCCAGAGGTTCTGCAGGTTaGGAAGCAACACCATCTTGC +
Preference number: 4 (lower is better)
Translates to: SQFQNVRSEESLAINPLSRGSAG*EATPSC
Trigger: GCAAGATGGTGTTGCTTCTCAACCTGCAGAACCTCT...GGAGAGTGGATTAATCGCCAAAGATTCTTCTGATCTGACATTTTGAAATTGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp CAATTTCAAAATGTCAGATCAGAAGAATCTTTGGCGATTAATCCACTCTCCATTCCCAGAGGAGTCTGCTaGAAGATGTCCACGAACTTC +
Preference number: 4 (lower is better)
Translates to: QFQNVRSEESLAINPLSIPRGVC*KMSTNF
Trigger: GAAGTTCGTGGACATCTTTCAGCAGACTCCTCTGGG...AATGGAGAGTGGATTAATCGCCAAAGATTCTTCTGATCTGACATTTTGAAATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp AGGACTAGATATTCATACATGCGAGAGCACACTGAGACTGCATGTTTATTTGGCTCCCAAAAGCCTAGCTaGTGTCTATGTGCCATAAAT +
Preference number: 4 (lower is better)
Translates to: RTRYSYMREHTETACLFGSQKPS*CLCAIN
Trigger: ATTTATGGCACATAGACATCAGCTAGGCTTTTGGGA...GCCAAATAAACATGCAGTCTCAGTGTGCTCTCGCATGTATGAATATCTAGTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR TCA 90 bp TTTTTCCAGCTGGAAACGGGATTCGTAATGGTAATGGTTGAACTTAATGAACGTTCTGTGTGCACAGTCTaGACACACTACTTCATGGGT +
Preference number: 4 (lower is better)
Translates to: FFQLETGFVMVMVELNERSVCTV*THYFMG
Trigger: ACCCATGAAGTAGTGTGTTCAGACTGTGCACACAGA...ACGTTCATTAAGTTCAACCATTACCATTACGAATCCCGTTTCCAGCTGGAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR TCA 90 bp GATGAGAAAGTTTCAGAACATGTATGTACATGGTTCAGAAACAGCTCGGCTTTCATTAGGTGTGACTTCTaGCCAAAGTTGCTCTGGTTG +
Preference number: 4 (lower is better)
Translates to: DEKVSEHVCTWFRNSSAFIRCDF*PKLLWL
Trigger: CAACCAGAGCAACTTTGGTCAGAAGTCACACCTAAT...GAAAGCCGAGCTGTTTCTGAACCATGTACATACATGTTCTGAAACTTTCTCATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR GCA 90 bp GTCTCTTCTAAAAATACAAAAGGAACCGAGTGTGGCGGCACATTGTTCTTTAAACTGCAGATGGCTTCATaGAGTTTCAGACACACAGTC +
Preference number: 4 (lower is better)
Translates to: VSSKNTKGTECGGTLFFKLQMAS*SFRHTV
Trigger: GACTGTGTGTCTGAAACTGCATGAAGCCATCTGCAG...TTTAAAGAACAATGTGCCGCCACACTCGGTTCCTTTTGTATTTTTAGAAGAGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000319921.4
CDS-3UTR GCA 90 bp GTCTCTTCTAAAAATACAAAAGGAACCGAGTGTGGCGGCACATTGTTCTTTAAAGTAGCTTTGTGCTGCTaGAGATGGCTTCATGCAGTT +
Preference number: 4 (lower is better)
Translates to: VSSKNTKGTECGGTLFFKVALCC*RWLHAV
Trigger: AACTGCATGAAGCCATCTGCAGCAGCACAAAGCTAC...TTTAAAGAACAATGTGCCGCCACACTCGGTTCCTTTTGTATTTTTAGAAGAGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000319921.4
CDS-3UTR GCA 90 bp CAATTTCAAAATGTCAGATCAGAAGAATCTTTGGCGATTAATCCACTCTCCATTCGTGGGGTGGAGGCTTaGATTGTGGGATCTGTACAA +
Preference number: 4 (lower is better)
Translates to: QFQNVRSEESLAINPLSIRGVEA*IVGSVQ
Trigger: TTGTACAGATCCCACAATGCAAGCCTCCACCCCACG...AATGGAGAGTGGATTAATCGCCAAAGATTCTTCTGATCTGACATTTTGAAATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp CAATTTCAAAATGTCAGATCAGAAGAATCTTTGGCGATTAATCCACTCTCCATTGCGCATGGCAGTCAATaGAGATGCTCTGTTCCATCG +
Preference number: 4 (lower is better)
Translates to: QFQNVRSEESLAINPLSIAHGSQ*RCSVPS
Trigger: CGATGGAACAGAGCATCTGCATTGACTGCCATGCGC...AATGGAGAGTGGATTAATCGCCAAAGATTCTTCTGATCTGACATTTTGAAATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp GAGTCCTGGACAAGCATTTTGTATTTTTGTAGTTCTCACTCCTTAGGCCCAATTAAGATTATCATTTCGTaGAGCTCTAGCAGGAAGGCG +
Preference number: 4 (lower is better)
Translates to: ESWTSILYFCSSHSLGPIKIIIS*SSSRKA
Trigger: CGCCTTCCTGCTAGAGCTGCACGAAATGATAATCTT...AATTGGGCCTAAGGAGTGAGAACTACAAAAATACAAAATGCTTGTCCAGGACTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp GAAAGTTTCAGAACATGTATGTACATGGTTCAGAAACAGCTCGGCTTTCAAAAACCTTCTCCAATCCAGTaGTTCCTCCACAGCACATTG +
Preference number: 4 (lower is better)
Translates to: ESFRTCMYMVQKQLGFQKPSPIQ*FLHSTL
Trigger: CAATGTGCTGTGGAGGAAGCACTGGATTGGAGAAGG...TTTTTGAAAGCCGAGCTGTTTCTGAACCATGTACATACATGTTCTGAAACTTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp CAATTTCAAAATGTCAGATCAGAAGAATCTTTGGCGATTAATCCACTCTCCATTACCCAAATTCCAGTCTaGACTGAGGAGGTCACGTCC +
Preference number: 4 (lower is better)
Translates to: QFQNVRSEESLAINPLSITQIPV*TEEVTS
Trigger: GGACGTGACCTCCTCAGTGCAGACTGGAATTTGGGT...AATGGAGAGTGGATTAATCGCCAAAGATTCTTCTGATCTGACATTTTGAAATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp CAATTTCAAAATGTCAGATCAGAAGAATCTTTGGCGATTAATCCACTCTCCATTAAGAGCATCGCGCTGTaGTCGTGGAACCACCTGAAA +
Preference number: 4 (lower is better)
Translates to: QFQNVRSEESLAINPLSIKSIAL*SWNHLK
Trigger: TTTCAGGTGGTTCCACGAGCACAGCGCGATGCTCTT...AATGGAGAGTGGATTAATCGCCAAAGATTCTTCTGATCTGACATTTTGAAATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp AGAATGAATATTAAGGATACTGCCTCTAACATATCAATAGCTGTGCTGAGCTGTCACGTGACACAAAAATaGCCCGGTTCATCTTGGCAG +
Preference number: 4 (lower is better)
Translates to: RMNIKDTASNISIAVLSCHVTQK*PGSSWQ
Trigger: CTGCCAAGATGAACCGGGGCATTTTTGTGTCACGTG...ACAGCTCAGCACAGCTATTGATATGTTAGAGGCAGTATCCTTAATATTCATTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp CAATTTCAAAATGTCAGATCAGAAGAATCTTTGGCGATTAATCCACTCTCCATTTCGAAGAATGTCTGCTaGAGGATCTGCAGTGCCACG +
Preference number: 4 (lower is better)
Translates to: QFQNVRSEESLAINPLSISKNVC*RICSAT
Trigger: CGTGGCACTGCAGATCCTGCAGCAGACATTCTTCGA...AATGGAGAGTGGATTAATCGCCAAAGATTCTTCTGATCTGACATTTTGAAATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp GATGAGAAAGTTTCAGAACATGTATGTACATGGTTCAGAAACAGCTCGGCTTTCGAAGCAACACCATCTTaGCTGTTTCCATGCAGATCT +
Preference number: 4 (lower is better)
Translates to: DEKVSEHVCTWFRNSSAFEATPS*LFPCRS
Trigger: AGATCTGCATGGAAACAGGCAAGATGGTGTTGCTTC...GAAAGCCGAGCTGTTTCTGAACCATGTACATACATGTTCTGAAACTTTCTCATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp GAAAGTTTCAGAACATGTATGTACATGGTTCAGAAACAGCTCGGCTTTCAAAAAGTAGTACTGGTTGAGTaGGTCGTAGAGGCTCTCGTA +
Preference number: 4 (lower is better)
Translates to: ESFRTCMYMVQKQLGFQKVVLVE*VVEALV
Trigger: TACGAGAGCCTCTACGACGCACTCAACCAGTACTAC...TTTTTGAAAGCCGAGCTGTTTCTGAACCATGTACATACATGTTCTGAAACTTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp AGAATGAATATTAAGGATACTGCCTCTAACATATCAATAGCTGTGCTGAGCTGTAAACTGTTGCACATCTaGCGGAAGCGGGCATGCTTT +
Preference number: 4 (lower is better)
Translates to: RMNIKDTASNISIAVLSCKLLHI*RKRACF
Trigger: AAAGCATGCCCGCTTCCGGCAGATGTGCAACAGTTT...ACAGCTCAGCACAGCTATTGATATGTTAGAGGCAGTATCCTTAATATTCATTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp ATGGCATACGAACAATATCTCAACAAAGAGTTAACGAAAAAGGGAAAGGAAAACTCCTTGGAGACATGCTaGCACGAAGGACACTCCATG +
Preference number: 4 (lower is better)
Translates to: MAYEQYLNKELTKKGKENSLETC*HEGHSM
Trigger: CATGGAGTGTCCTTCGTGCCAGCATGTCTCCAAGGA...GTTTTCCTTTCCCTTTTTCGTTAACTCTTTGTTGAGATATTGTTCGTATGCCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000319921.4
CDS-3UTR CCA 90 bp GAGTCCTGGACAAGCATTTTGTATTTTTGTAGTTCTCACTCCTTAGGCCCAATTTTCTTTTTGCTTTCTTaGACGGTCCAGGAGGCTTTG +
Preference number: 4 (lower is better)
Translates to: ESWTSILYFCSSHSLGPIFFLLS*TVQEAL
Trigger: CAAAGCCTCCTGGACCGTCCAAGAAAGCAAAAAGAA...AATTGGGCCTAAGGAGTGAGAACTACAAAAATACAAAATGCTTGTCCAGGACTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR CCA 90 bp GAGTCCTGGACAAGCATTTTGTATTTTTGTAGTTCTCACTCCTTAGGCCCAATTTTTAACTGCATTGGCTaGCTCAGCTACAGCATCAAC +
Preference number: 4 (lower is better)
Translates to: ESWTSILYFCSSHSLGPIFNCIG*LSYSIN
Trigger: GTTGATGCTGTAGCTGAGCCAGCCAATGCAGTTAAA...AATTGGGCCTAAGGAGTGAGAACTACAAAAATACAAAATGCTTGTCCAGGACTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp GAAAGTTTCAGAACATGTATGTACATGGTTCAGAAACAGCTCGGCTTTCAAAAAAGAGAGATGATGGCGTaGAAGAACACGGTGACTCCT +
Preference number: 4 (lower is better)
Translates to: ESFRTCMYMVQKQLGFQKREMMA*KNTVTP
Trigger: AGGAGTCACCGTGTTCTTCCACGCCATCATCTCTCT...TTTTTGAAAGCCGAGCTGTTTCTGAACCATGTACATACATGTTCTGAAACTTTC
42% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp AGAATGAATATTAAGGATACTGCCTCTAACATATCAATAGCTGTGCTGAGCTGTGGCCCGTCTGTGATGTaGTTCATGACTTTCTGGAGT +
Preference number: 4 (lower is better)
Translates to: RMNIKDTASNISIAVLSCGPSVM*FMTFWS
Trigger: ACTCCAGAAAGTCATGAACCACATCACAGACGGGCC...ACAGCTCAGCACAGCTATTGATATGTTAGAGGCAGTATCCTTAATATTCATTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp GGCATACGAACAATATCTCAACAAAGAGTTAACGAAAAAGGGAAAGGAAAACCTACTCATCTGGTGAGCTaGCATCTGAGGTTAGGAGGT +
Preference number: 4 (lower is better)
Translates to: GIRTISQQRVNEKGKGKPTHLVS*HLRLGG
Trigger: ACCTCCTAACCTCAGATGCCAGCTCACCAGATGAGT...AGGTTTTCCTTTCCCTTTTTCGTTAACTCTTTGTTGAGATATTGTTCGTATGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000319921.4
CDS-3UTR CCA 90 bp AGAATGAATATTAAGGATACTGCCTCTAACATATCAATAGCTGTGCTGAGCTGTACTCATCTGGTGAGCTaGCATCTGAGGTTAGGAGGT +
Preference number: 4 (lower is better)
Translates to: RMNIKDTASNISIAVLSCTHLVS*HLRLGG
Trigger: ACCTCCTAACCTCAGATGCCAGCTCACCAGATGAGT...ACAGCTCAGCACAGCTATTGATATGTTAGAGGCAGTATCCTTAATATTCATTCT
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp TGCACTTTCCTGGCGCTTGTTTTTCCAGCTGGAAACGGGATTCGTAATGGTAATCCTTGGAAGACTGTTTaGACTGAATTATTTCCAGTT +
Preference number: 4 (lower is better)
Translates to: CTFLALVFPAGNGIRNGNPWKTV*TELFPV
Trigger: AACTGGAAATAATTCAGTCCAAACAGTCTTCCAAGG...ATTACCATTACGAATCCCGTTTCCAGCTGGAAAAACAAGCGCCAGGAAAGTGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR CCA 90 bp GGCATACGAACAATATCTCAACAAAGAGTTAACGAAAAAGGGAAAGGAAAACCTTGTTCTGTCAACCTTTaGAGTCTCTTCCCGCACACC +
Preference number: 4 (lower is better)
Translates to: GIRTISQQRVNEKGKGKPCSVNL*SLFPHT
Trigger: GGTGTGCGGGAAGAGACTCCAAAGGTTGACAGAACA...AGGTTTTCCTTTCCCTTTTTCGTTAACTCTTTGTTGAGATATTGTTCGTATGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000319921.4
CDS-3UTR CCA 90 bp AGAATGAATATTAAGGATACTGCCTCTAACATATCAATAGCTGTGCTGAGCTGTCTGCAGAAAGCCTTTTaGATCCCTCACTGGAGGCTT +
Preference number: 4 (lower is better)
Translates to: RMNIKDTASNISIAVLSCLQKAF*IPHWRL
Trigger: AAGCCTCCAGTGAGGGATCCAAAAGGCTTTCTGCAG...ACAGCTCAGCACAGCTATTGATATGTTAGAGGCAGTATCCTTAATATTCATTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp TCACAATTTCAAAATGTCAGATCAGAAGAATCTTTGGCGATTAATCCACTCTCCAAGCGCTCCTCGGTTTaGGTTTGGGGGTTCTTTAGT +
Preference number: 4 (lower is better)
Translates to: SQFQNVRSEESLAINPLSKRSSV*VWGFFS
Trigger: ACTAAAGAACCCCCAAACCCAAACCGAGGAGCGCTT...GGAGAGTGGATTAATCGCCAAAGATTCTTCTGATCTGACATTTTGAAATTGTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp CAATTTCAAAATGTCAGATCAGAAGAATCTTTGGCGATTAATCCACTCTCCATTTGCTCAAGGTGTGCATaGCTGAGTCCTGGACAAGCA +
Preference number: 4 (lower is better)
Translates to: QFQNVRSEESLAINPLSICSRCA*LSPGQA
Trigger: TGCTTGTCCAGGACTCAGCCATGCACACCTTGAGCA...AATGGAGAGTGGATTAATCGCCAAAGATTCTTCTGATCTGACATTTTGAAATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp AGAATGAATATTAAGGATACTGCCTCTAACATATCAATAGCTGTGCTGAGCTGTAGCAGCTTTTTGGCCTaGATGAGCTCCTGGTTGATC +
Preference number: 4 (lower is better)
Translates to: RMNIKDTASNISIAVLSCSSFLA*MSSWLI
Trigger: GATCAACCAGGAGCTCATCCAGGCCAAAAAGCTGCT...ACAGCTCAGCACAGCTATTGATATGTTAGAGGCAGTATCCTTAATATTCATTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp TCACAATTTCAAAATGTCAGATCAGAAGAATCTTTGGCGATTAATCCACTCTCCTCTTTTGGCCACCTTTaGGCGCCTGGATCACATAGA +
Preference number: 4 (lower is better)
Translates to: SQFQNVRSEESLAINPLSSFGHL*APGSHR
Trigger: TCTATGTGATCCAGGCGCCCAAAGGTGGCCAAAAGA...GGAGAGTGGATTAATCGCCAAAGATTCTTCTGATCTGACATTTTGAAATTGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp TTTTTCCAGCTGGAAACGGGATTCGTAATGGTAATGGTTGAACTTAATGAACGTGTTTCGGAAAGAACCTaGCGATGGCTTTCCGATATG +
Preference number: 4 (lower is better)
Translates to: FFQLETGFVMVMVELNERVSERT*RWLSDM
Trigger: CATATCGGAAAGCCATCGCCAGGTTCTTTCCGAAAC...ACGTTCATTAAGTTCAACCATTACCATTACGAATCCCGTTTCCAGCTGGAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR CCA 90 bp TTTTTCCAGCTGGAAACGGGATTCGTAATGGTAATGGTTGAACTTAATGAACGTTCAAGGCCAAGTTCTTaGCGATGGTTTTCCTCAGAG +
Preference number: 4 (lower is better)
Translates to: FFQLETGFVMVMVELNERSRPSS*RWFSSE
Trigger: CTCTGAGGAAAACCATCGCCAAGAACTTGGCCTTGA...ACGTTCATTAAGTTCAACCATTACCATTACGAATCCCGTTTCCAGCTGGAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR CCA 90 bp AGAATGAATATTAAGGATACTGCCTCTAACATATCAATAGCTGTGCTGAGCTGTAGCTGGGTGTACTCTTaGTCCTTGGGGAAACCAGAA +
Preference number: 4 (lower is better)
Translates to: RMNIKDTASNISIAVLSCSWVYS*SLGKPE
Trigger: TTCTGGTTTCCCCAAGGACCAAGAGTACACCCAGCT...ACAGCTCAGCACAGCTATTGATATGTTAGAGGCAGTATCCTTAATATTCATTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp TCACAATTTCAAAATGTCAGATCAGAAGAATCTTTGGCGATTAATCCACTCTCCTCAGCAGGATCGATTTaGCCTCCTCAGACACCTTCT +
Preference number: 4 (lower is better)
Translates to: SQFQNVRSEESLAINPLSSAGSI*PPQTPS
Trigger: AGAAGGTGTCTGAGGAGGCCAAATCGATCCTGCTGA...GGAGAGTGGATTAATCGCCAAAGATTCTTCTGATCTGACATTTTGAAATTGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp GAGTCCTGGACAAGCATTTTGTATTTTTGTAGTTCTCACTCCTTAGGCCCAATTGAACCTGAGGGTAGATaGTCAGGATTCTGGAAAAGT +
Preference number: 4 (lower is better)
Translates to: ESWTSILYFCSSHSLGPIEPEGR*SGFWKS
Trigger: ACTTTTCCAGAATCCTGACCATCTACCCTCAGGTTC...AATTGGGCCTAAGGAGTGAGAACTACAAAAATACAAAATGCTTGTCCAGGACTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp TCACAATTTCAAAATGTCAGATCAGAAGAATCTTTGGCGATTAATCCACTCTCCCGCTTGGGAAACAGCTaGAGAGAATTCGTCTGGCAA +
Preference number: 4 (lower is better)
Translates to: SQFQNVRSEESLAINPLSRLGNS*REFVWQ
Trigger: TTGCCAGACGAATTCTCTCCAGCTGTTTCCCAAGCG...GGAGAGTGGATTAATCGCCAAAGATTCTTCTGATCTGACATTTTGAAATTGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp TCACAATTTCAAAATGTCAGATCAGAAGAATCTTTGGCGATTAATCCACTCTCCTGTTCACAGTGTCTCTaGGCAGCATCTCTTAAGCGC +
Preference number: 4 (lower is better)
Translates to: SQFQNVRSEESLAINPLSCSQCL*AASLKR
Trigger: GCGCTTAAGAGATGCTGCCCAGAGACACTGTGAACA...GGAGAGTGGATTAATCGCCAAAGATTCTTCTGATCTGACATTTTGAAATTGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp TCACAATTTCAAAATGTCAGATCAGAAGAATCTTTGGCGATTAATCCACTCTCCACGCTTCCCCTCAAATaGAGTGGGCAAGTTCCAAAG +
Preference number: 4 (lower is better)
Translates to: SQFQNVRSEESLAINPLSTLPLK*SGQVPK
Trigger: CTTTGGAACTTGCCCACTCCATTTGAGGGGAAGCGT...GGAGAGTGGATTAATCGCCAAAGATTCTTCTGATCTGACATTTTGAAATTGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR TCA 90 bp ACTGCGTGTGTGGCTGAGCTACAAGTCTCCTGGAATGTAAACAATGTTGGTTTAGAAGACTGTTTGGACTaGATTATTTCCAGTTTCATC +
Preference number: 4 (lower is better)
Translates to: TACVAELQVSWNVNNVGLEDCLD*IISSFI
Trigger: GATGAAACTGGAAATAATTCAGTCCAAACAGTCTTC...TAAACCAACATTGTTTACATTCCAGGAGACTTGTAGCTCAGCCACACACGCAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp GGCATACGAACAATATCTCAACAAAGAGTTAACGAAAAAGGGAAAGGAAAACCTGTCCCCGGAATTCAATaGCCTCAATGTTTCTGGACT +
Preference number: 4 (lower is better)
Translates to: GIRTISQQRVNEKGKGKPVPGIQ*PQCFWT
Trigger: AGTCCAGAAACATTGAGGTCATTGAATTCCGGGGAC...AGGTTTTCCTTTCCCTTTTTCGTTAACTCTTTGTTGAGATATTGTTCGTATGCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000319921.4
CDS-3UTR TCA 90 bp AGAATGAATATTAAGGATACTGCCTCTAACATATCAATAGCTGTGCTGAGCTGTTGGACAGAAAGACTGTaGTCCTGTTGTGAAGCAGCT +
Preference number: 4 (lower is better)
Translates to: RMNIKDTASNISIAVLSCWTERL*SCCEAA
Trigger: AGCTGCTTCACAACAGGATCACAGTCTTTCTGTCCA...ACAGCTCAGCACAGCTATTGATATGTTAGAGGCAGTATCCTTAATATTCATTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp TGCTGGCCAGTCTATCTTACACAAAGTTTTAAGTTTTCCTGGTGTCATAGTACTATCCGCTTTGTACCTTaGACTGATTTCCCCAAATGG +
Preference number: 4 (lower is better)
Translates to: CWPVYLTQSFKFSWCHSTIRFVP*TDFPKW
Trigger: CCATTTGGGGAAATCAGTTCAAGGTACAAAGCGGAT...AGTACTATGACACCAGGAAAACTTAAAACTTTGTGTAAGATAGACTGGCCAGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR TCA 90 bp GAAAGTTTCAGAACATGTATGTACATGGTTCAGAAACAGCTCGGCTTTCAAAAACATGCGAGAGCACACTaGGACTGCATGTTTATTTGG +
Preference number: 4 (lower is better)
Translates to: ESFRTCMYMVQKQLGFQKHARAH*DCMFIW
Trigger: CCAAATAAACATGCAGTCTCAGTGTGCTCTCGCATG...TTTTTGAAAGCCGAGCTGTTTCTGAACCATGTACATACATGTTCTGAAACTTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp CAATTTCAAAATGTCAGATCAGAAGAATCTTTGGCGATTAATCCACTCTCCATTGGTGATGGTATTCCTTaGTCTGTTCGACTCGGTCCT +
Preference number: 4 (lower is better)
Translates to: QFQNVRSEESLAINPLSIGDGIP*SVRLGP
Trigger: AGGACCGAGTCGAACAGATCAAGGAATACCATCACC...AATGGAGAGTGGATTAATCGCCAAAGATTCTTCTGATCTGACATTTTGAAATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp TTTTTCCAGCTGGAAACGGGATTCGTAATGGTAATGGTTGAACTTAATGAACGTAGATGTCAAGAAAACTaGACTGGGGTACACGTGTAC +
Preference number: 4 (lower is better)
Translates to: FFQLETGFVMVMVELNERRCQEN*TGVHVY
Trigger: GTACACGTGTACCCCAGTTCAGTTTTCTTGACATCT...ACGTTCATTAAGTTCAACCATTACCATTACGAATCCCGTTTCCAGCTGGAAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR TCA 90 bp TCACAATTTCAAAATGTCAGATCAGAAGAATCTTTGGCGATTAATCCACTCTCCGCATATTGTCGGTTGTaGGCTCATACGTTTTGTCGG +
Preference number: 4 (lower is better)
Translates to: SQFQNVRSEESLAINPLSAYCRL*AHTFCR
Trigger: CCGACAAAACGTATGAGCTCACAACCGACAATATGC...GGAGAGTGGATTAATCGCCAAAGATTCTTCTGATCTGACATTTTGAAATTGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp TCACAATTTCAAAATGTCAGATCAGAAGAATCTTTGGCGATTAATCCACTCTCCCGTTTTCATCTAGGCTaGTGGACTCAACCAGTCTCT +
Preference number: 4 (lower is better)
Translates to: SQFQNVRSEESLAINPLSRFHLG*WTQPVS
Trigger: AGAGACTGGTTGAGTCCATCAGCCTAGATGAAAACG...GGAGAGTGGATTAATCGCCAAAGATTCTTCTGATCTGACATTTTGAAATTGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp GGCATACGAACAATATCTCAACAAAGAGTTAACGAAAAAGGGAAAGGAAAACCTGCAGCTCACAGATATTaGTGTCCCATTTTGACTCCC +
Preference number: 4 (lower is better)
Translates to: GIRTISQQRVNEKGKGKPAAHRY*CPILTP
Trigger: GGGAGTCAAAATGGGACAGCAATATCTGTGAGCTGC...AGGTTTTCCTTTCCCTTTTTCGTTAACTCTTTGTTGAGATATTGTTCGTATGCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000319921.4
CDS-3UTR GCA 90 bp GAAAGTTTCAGAACATGTATGTACATGGTTCAGAAACAGCTCGGCTTTCAAAAAAGAGAGGCTCGTCTATaGTCAGCAAATGCTGCTTCT +
Preference number: 4 (lower is better)
Translates to: ESFRTCMYMVQKQLGFQKREARL*SANAAS
Trigger: AGAAGCAGCATTTGCTGAGCATAGACGAGCCTCTCT...TTTTTGAAAGCCGAGCTGTTTCTGAACCATGTACATACATGTTCTGAAACTTTC
41% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp TCACAATTTCAAAATGTCAGATCAGAAGAATCTTTGGCGATTAATCCACTCTCCGTAGCTTTGTGCTGCTaGAGATGGCTTCATGCAGTT +
Preference number: 4 (lower is better)
Translates to: SQFQNVRSEESLAINPLSVALCC*RWLHAV
Trigger: AACTGCATGAAGCCATCTGCAGCAGCACAAAGCTAC...GGAGAGTGGATTAATCGCCAAAGATTCTTCTGATCTGACATTTTGAAATTGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp GAAAGTTTCAGAACATGTATGTACATGGTTCAGAAACAGCTCGGCTTTCAAAAATGGACGTTCTGGAACTaGTTCACTAGATCCCTTTGC +
Preference number: 4 (lower is better)
Translates to: ESFRTCMYMVQKQLGFQKWTFWN*FTRSLC
Trigger: GCAAAGGGATCTAGTGAAGCAGTTCCAGAACGTCCA...TTTTTGAAAGCCGAGCTGTTTCTGAACCATGTACATACATGTTCTGAAACTTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp TCACAATTTCAAAATGTCAGATCAGAAGAATCTTTGGCGATTAATCCACTCTCCCAAAGGAGCTCCGAGTaGAAGTTGAAGACTTCAGCA +
Preference number: 4 (lower is better)
Translates to: SQFQNVRSEESLAINPLSQRSSE*KLKTSA
Trigger: TGCTGAAGTCTTCAACTTGCACTCGGAGCTCCTTTG...GGAGAGTGGATTAATCGCCAAAGATTCTTCTGATCTGACATTTTGAAATTGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp CAATTTCAAAATGTCAGATCAGAAGAATCTTTGGCGATTAATCCACTCTCCATTCAGATGCTTCATGAATaGACTGAAGTCCACGCTGGG +
Preference number: 4 (lower is better)
Translates to: QFQNVRSEESLAINPLSIQMLHE*TEVHAG
Trigger: CCCAGCGTGGACTTCAGTGCATTCATGAAGCATCTG...AATGGAGAGTGGATTAATCGCCAAAGATTCTTCTGATCTGACATTTTGAAATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp CAATTTCAAAATGTCAGATCAGAAGAATCTTTGGCGATTAATCCACTCTCCATTCACGTGACACAAAAATaGCCCGGTTCATCTTGGCAG +
Preference number: 4 (lower is better)
Translates to: QFQNVRSEESLAINPLSIHVTQK*PGSSWQ
Trigger: CTGCCAAGATGAACCGGGGCATTTTTGTGTCACGTG...AATGGAGAGTGGATTAATCGCCAAAGATTCTTCTGATCTGACATTTTGAAATTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp CAATTTCAAAATGTCAGATCAGAAGAATCTTTGGCGATTAATCCACTCTCCATTTGCATTCACAGAGAGTaGGCATCACGGCCTCAAAAG +
Preference number: 4 (lower is better)
Translates to: QFQNVRSEESLAINPLSICIHRE*ASRPQK
Trigger: CTTTTGAGGCCGTGATGCGCACTCTCTGTGAATGCA...AATGGAGAGTGGATTAATCGCCAAAGATTCTTCTGATCTGACATTTTGAAATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp CAATTTCAAAATGTCAGATCAGAAGAATCTTTGGCGATTAATCCACTCTCCATTAAACTGTTGCACATCTaGCGGAAGCGGGCATGCTTT +
Preference number: 4 (lower is better)
Translates to: QFQNVRSEESLAINPLSIKLLHI*RKRACF
Trigger: AAAGCATGCCCGCTTCCGGCAGATGTGCAACAGTTT...AATGGAGAGTGGATTAATCGCCAAAGATTCTTCTGATCTGACATTTTGAAATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp TGCTGGCCAGTCTATCTTACACAAAGTTTTAAGTTTTCCTGGTGTCATAGTACTCCACCTCCCCAGTTATaGAACCTTCACACTTTATGT +
Preference number: 4 (lower is better)
Translates to: CWPVYLTQSFKFSWCHSTPPPQL*NLHTLC
Trigger: ACATAAAGTGTGAAGGTTGCATAACTGGGGAGGTGG...AGTACTATGACACCAGGAAAACTTAAAACTTTGTGTAAGATAGACTGGCCAGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR CCA 90 bp GTCTCTTCTAAAAATACAAAAGGAACCGAGTGTGGCGGCACATTGTTCTTTAAATTTAACTGCATTGGCTaGCTCAGCTACAGCATCAAC +
Preference number: 4 (lower is better)
Translates to: VSSKNTKGTECGGTLFFKFNCIG*LSYSIN
Trigger: GTTGATGCTGTAGCTGAGCCAGCCAATGCAGTTAAA...TTTAAAGAACAATGTGCCGCCACACTCGGTTCCTTTTGTATTTTTAGAAGAGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000319921.4
CDS-3UTR CCA 90 bp GTCTCTTCTAAAAATACAAAAGGAACCGAGTGTGGCGGCACATTGTTCTTTAAAAAGAAGCAACATAGATaGCCGTCAATGGACACATGG +
Preference number: 4 (lower is better)
Translates to: VSSKNTKGTECGGTLFFKKKQHR*PSMDTW
Trigger: CCATGTGTCCATTGACGGCCATCTATGTTGCTTCTT...TTTAAAGAACAATGTGCCGCCACACTCGGTTCCTTTTGTATTTTTAGAAGAGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000319921.4
CDS-3UTR CCA 90 bp TCACAATTTCAAAATGTCAGATCAGAAGAATCTTTGGCGATTAATCCACTCTCCACTTGCTGGACGTTCTaGAACTGCTTCACTAGATCC +
Preference number: 4 (lower is better)
Translates to: SQFQNVRSEESLAINPLSTCWTF*NCFTRS
Trigger: GGATCTAGTGAAGCAGTTCCAGAACGTCCAGCAAGT...GGAGAGTGGATTAATCGCCAAAGATTCTTCTGATCTGACATTTTGAAATTGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp CAATTTCAAAATGTCAGATCAGAAGAATCTTTGGCGATTAATCCACTCTCCATTTCCTCCACCTGGTACTaGCAGTTGGAGAGAATCAGT +
Preference number: 4 (lower is better)
Translates to: QFQNVRSEESLAINPLSISSTWY*QLERIS
Trigger: ACTGATTCTCTCCAACTGCCAGTACCAGGTGGAGGA...AATGGAGAGTGGATTAATCGCCAAAGATTCTTCTGATCTGACATTTTGAAATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp GTTCTAGACCACAGGTTTCTCGCCTGGAAGAACCTTTCCTTTTTGGAAGAGAAATTTCCGAAACATAACTaGTTTTGTATGTGCTCTGAG +
Preference number: 4 (lower is better)
Translates to: VLDHRFLAWKNLSFLEEKFPKHN*FCMCSE
Trigger: CTCAGAGCACATACAAAACCAGTTATGTTTCGGAAA...TTTCTCTTCCAAAAAGGAAAGGTTCTTCCAGGCGAGAAACCTGTGGTCTAGAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR CCA 90 bp CAATTTCAAAATGTCAGATCAGAAGAATCTTTGGCGATTAATCCACTCTCCATTTTCATCAGACACTGGTaGCACCATGACAGTGAGGAG +
Preference number: 4 (lower is better)
Translates to: QFQNVRSEESLAINPLSIFIRHW*HHDSEE
Trigger: CTCCTCACTGTCATGGTGCCACCAGTGTCTGATGAA...AATGGAGAGTGGATTAATCGCCAAAGATTCTTCTGATCTGACATTTTGAAATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp GTTCTAGACCACAGGTTTCTCGCCTGGAAGAACCTTTCCTTTTTGGAAGAGAAACCTGACTTTAGATCCTaGTGCAACTTAATGAACTTT +
Preference number: 4 (lower is better)
Translates to: VLDHRFLAWKNLSFLEEKPDFRS*CNLMNF
Trigger: AAAGTTCATTAAGTTGCACCAGGATCTAAAGTCAGG...TTTCTCTTCCAAAAAGGAAAGGTTCTTCCAGGCGAGAAACCTGTGGTCTAGAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR CCA 90 bp CAATTTCAAAATGTCAGATCAGAAGAATCTTTGGCGATTAATCCACTCTCCATTAGCAGCTTTTTGGCCTaGATGAGCTCCTGGTTGATC +
Preference number: 4 (lower is better)
Translates to: QFQNVRSEESLAINPLSISSFLA*MSSWLI
Trigger: GATCAACCAGGAGCTCATCCAGGCCAAAAAGCTGCT...AATGGAGAGTGGATTAATCGCCAAAGATTCTTCTGATCTGACATTTTGAAATTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp TCACAATTTCAAAATGTCAGATCAGAAGAATCTTTGGCGATTAATCCACTCTCCTGCTCCATTCGCTTCTaGGTCACAAATCTCTTCCAG +
Preference number: 4 (lower is better)
Translates to: SQFQNVRSEESLAINPLSCSIRF*VTNLFQ
Trigger: CTGGAAGAGATTTGTGACCCAGAAGCGAATGGAGCA...GGAGAGTGGATTAATCGCCAAAGATTCTTCTGATCTGACATTTTGAAATTGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp AGAATGAATATTAAGGATACTGCCTCTAACATATCAATAGCTGTGCTGAGCTGTTCAAGAAAACTGAACTaGGGTACACGTGTACGCAGC +
Preference number: 4 (lower is better)
Translates to: RMNIKDTASNISIAVLSCSRKLN*GTRVRS
Trigger: GCTGCGTACACGTGTACCCCAGTTCAGTTTTCTTGA...ACAGCTCAGCACAGCTATTGATATGTTAGAGGCAGTATCCTTAATATTCATTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp TGCTGGCCAGTCTATCTTACACAAAGTTTTAAGTTTTCCTGGTGTCATAGTACTGAAAGAACCTGGCGATaGCTTTCCGATATGAGTCTT +
Preference number: 4 (lower is better)
Translates to: CWPVYLTQSFKFSWCHSTERTWR*LSDMSL
Trigger: AAGACTCATATCGGAAAGCCATCGCCAGGTTCTTTC...AGTACTATGACACCAGGAAAACTTAAAACTTTGTGTAAGATAGACTGGCCAGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR CCA 90 bp CAATTTCAAAATGTCAGATCAGAAGAATCTTTGGCGATTAATCCACTCTCCATTTGTTCACAGTGTCTCTaGGCAGCATCTCTTAAGCGC +
Preference number: 4 (lower is better)
Translates to: QFQNVRSEESLAINPLSICSQCL*AASLKR
Trigger: GCGCTTAAGAGATGCTGCCCAGAGACACTGTGAACA...AATGGAGAGTGGATTAATCGCCAAAGATTCTTCTGATCTGACATTTTGAAATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp TCACAATTTCAAAATGTCAGATCAGAAGAATCTTTGGCGATTAATCCACTCTCCACGTCAGTGGGCTCCTaGAAGGGTTACTGTTTATCT +
Preference number: 4 (lower is better)
Translates to: SQFQNVRSEESLAINPLSTSVGS*KGYCLS
Trigger: AGATAAACAGTAACCCTTCCAGGAGCCCACTGACGT...GGAGAGTGGATTAATCGCCAAAGATTCTTCTGATCTGACATTTTGAAATTGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR CCA 90 bp CAATTTCAAAATGTCAGATCAGAAGAATCTTTGGCGATTAATCCACTCTCCATTATGGCTAGACTTGGGTaGCTTTACCTACTTGGCCCT +
Preference number: 4 (lower is better)
Translates to: QFQNVRSEESLAINPLSIMARLG*LYLLGP
Trigger: AGGGCCAAGTAGGTAAAGCCACCCAAGTCTAGCCAT...AATGGAGAGTGGATTAATCGCCAAAGATTCTTCTGATCTGACATTTTGAAATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR TCA 90 bp GTCTCTTCTAAAAATACAAAAGGAACCGAGTGTGGCGGCACATTGTTCTTTAAAATATACATAACCAGGTaGCTCAGAGGTAGCAGACTA +
Preference number: 4 (lower is better)
Translates to: VSSKNTKGTECGGTLFFKIYITR*LRGSRL
Trigger: TAGTCTGCTACCTCTGAGTCACCTGGTTATGTATAT...TTTAAAGAACAATGTGCCGCCACACTCGGTTCCTTTTGTATTTTTAGAAGAGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000319921.4
CDS-3UTR TCA 90 bp AGAATGAATATTAAGGATACTGCCTCTAACATATCAATAGCTGTGCTGAGCTGTTCTTGCATTCGCCAATaGATTTGCTCACAGCTTCAC +
Preference number: 4 (lower is better)
Translates to: RMNIKDTASNISIAVLSCSCIRQ*ICSQLH
Trigger: GTGAAGCTGTGAGCAAATTCATTGGCGAATGCAAGA...ACAGCTCAGCACAGCTATTGATATGTTAGAGGCAGTATCCTTAATATTCATTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp GAAAGTTTCAGAACATGTATGTACATGGTTCAGAAACAGCTCGGCTTTCAAAAAATCTCTTCTGGGAACTaGGATGCCATTTCAGGAAGA +
Preference number: 4 (lower is better)
Translates to: ESFRTCMYMVQKQLGFQKISSGN*DAISGR
Trigger: TCTTCCTGAAATGGCATCTCAGTTCCCAGAAGAGAT...TTTTTGAAAGCCGAGCTGTTTCTGAACCATGTACATACATGTTCTGAAACTTTC
40% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp CAATTTCAAAATGTCAGATCAGAAGAATCTTTGGCGATTAATCCACTCTCCATTCAATCTCTGCAAGGGTaGCCTCTCCTGACTTTAGAT +
Preference number: 4 (lower is better)
Translates to: QFQNVRSEESLAINPLSIQSLQG*PLLTLD
Trigger: ATCTAAAGTCAGGAGAGGTCACCCTTGCAGAGATTG...AATGGAGAGTGGATTAATCGCCAAAGATTCTTCTGATCTGACATTTTGAAATTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp GATGAGAAAGTTTCAGAACATGTATGTACATGGTTCAGAAACAGCTCGGCTTTCCATGATCTTAAGTTCTaGATCCAGGTCCGTGTATTT +
Preference number: 4 (lower is better)
Translates to: DEKVSEHVCTWFRNSSAFHDLKF*IQVRVF
Trigger: AAATACACGGACCTGGATTCAGAACTTAAGATCATG...GAAAGCCGAGCTGTTTCTGAACCATGTACATACATGTTCTGAAACTTTCTCATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp TCACAATTTCAAAATGTCAGATCAGAAGAATCTTTGGCGATTAATCCACTCTCCAGATGTCAAGAAAACTaGACTGGGGTACACGTGTAC +
Preference number: 4 (lower is better)
Translates to: SQFQNVRSEESLAINPLSRCQEN*TGVHVY
Trigger: GTACACGTGTACCCCAGTTCAGTTTTCTTGACATCT...GGAGAGTGGATTAATCGCCAAAGATTCTTCTGATCTGACATTTTGAAATTGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp GAAAGTTTCAGAACATGTATGTACATGGTTCAGAAACAGCTCGGCTTTCAAAAATCTTTAAAAAGACACTaGGGCGCATCTTGGATACCC +
Preference number: 4 (lower is better)
Translates to: ESFRTCMYMVQKQLGFQKSLKRH*GASWIP
Trigger: GGGTATCCAAGATGCGCCTCAGTGTCTTTTTAAAGA...TTTTTGAAAGCCGAGCTGTTTCTGAACCATGTACATACATGTTCTGAAACTTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp CAATTTCAAAATGTCAGATCAGAAGAATCTTTGGCGATTAATCCACTCTCCATTGTTTTTCACAGCAGCTaGACTTCTGTTCTTCCCCTC +
Preference number: 4 (lower is better)
Translates to: QFQNVRSEESLAINPLSIVFHSS*TSVLPL
Trigger: GAGGGGAAGAACAGAAGTGCAGCTGCTGTGAAAAAC...AATGGAGAGTGGATTAATCGCCAAAGATTCTTCTGATCTGACATTTTGAAATTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp GTCTCTTCTAAAAATACAAAAGGAACCGAGTGTGGCGGCACATTGTTCTTTAAAGGTGCTTCTTGGAAATaGAGACAATGCCTTCAACAA +
Preference number: 4 (lower is better)
Translates to: VSSKNTKGTECGGTLFFKGASWK*RQCLQQ
Trigger: TTGTTGAAGGCATTGTCTGCATTTCCAAGAAGCACC...TTTAAAGAACAATGTGCCGCCACACTCGGTTCCTTTTGTATTTTTAGAAGAGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000319921.4
CDS-3UTR GCA 90 bp GGCATACGAACAATATCTCAACAAAGAGTTAACGAAAAAGGGAAAGGAAAACCTATCGGTCCACAGCTGTaGCTGTCCTTCATAAATCAT +
Preference number: 4 (lower is better)
Translates to: GIRTISQQRVNEKGKGKPIGPQL*LSFINH
Trigger: ATGATTTATGAAGGACAGGCACAGCTGTGGACCGAT...AGGTTTTCCTTTCCCTTTTTCGTTAACTCTTTGTTGAGATATTGTTCGTATGCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000319921.4
CDS-3UTR GCA 90 bp ATGGCATACGAACAATATCTCAACAAAGAGTTAACGAAAAAGGGAAAGGAAAACACGTCCTTGTGTCCATaGATCTTTGGCACAGGTTCA +
Preference number: 4 (lower is better)
Translates to: MAYEQYLNKELTKKGKENTSLCP*IFGTGS
Trigger: TGAACCTGTGCCAAAGATGCATGGACACAAGGACGT...GTTTTCCTTTCCCTTTTTCGTTAACTCTTTGTTGAGATATTGTTCGTATGCCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000319921.4
CDS-3UTR GCA 90 bp TTTTTCCAGCTGGAAACGGGATTCGTAATGGTAATGGTTGAACTTAATGAACGTGGAAAACGACCCAGGTaGTCAATGAAGTTTTCCATA +
Preference number: 4 (lower is better)
Translates to: FFQLETGFVMVMVELNERGKRPR*SMKFSI
Trigger: TATGGAAAACTTCATTGAGCACCTGGGTCGTTTTCC...ACGTTCATTAAGTTCAACCATTACCATTACGAATCCCGTTTCCAGCTGGAAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR GCA 90 bp TTTTTCCAGCTGGAAACGGGATTCGTAATGGTAATGGTTGAACTTAATGAACGTTGTTACGATCCTTCTTaGCAGACATCAGCATCAACT +
Preference number: 4 (lower is better)
Translates to: FFQLETGFVMVMVELNERCYDPS*QTSAST
Trigger: AGTTGATGCTGATGTCTGGCAAGAAGGATCGTAACA...ACGTTCATTAAGTTCAACCATTACCATTACGAATCCCGTTTCCAGCTGGAAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR GCA 90 bp GAAAGTTTCAGAACATGTATGTACATGGTTCAGAAACAGCTCGGCTTTCAAAAATTTGGAAAGTTTCGCTaGAGAACTCCCACAGATCCA +
Preference number: 4 (lower is better)
Translates to: ESFRTCMYMVQKQLGFQKFGKFR*RTPTDP
Trigger: TGGATCTGTGGGAGTTCTGCAGCGAAACTTTCCAAA...TTTTTGAAAGCCGAGCTGTTTCTGAACCATGTACATACATGTTCTGAAACTTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp CAATTTCAAAATGTCAGATCAGAAGAATCTTTGGCGATTAATCCACTCTCCATTAAAATAATCTCCGGCTaGTGGTCCCCCTCGAAGAAT +
Preference number: 4 (lower is better)
Translates to: QFQNVRSEESLAINPLSIKIISG*WSPSKN
Trigger: ATTCTTCGAGGGGGACCAGCAGCCGGAGATTATTTT...AATGGAGAGTGGATTAATCGCCAAAGATTCTTCTGATCTGACATTTTGAAATTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp AGAATGAATATTAAGGATACTGCCTCTAACATATCAATAGCTGTGCTGAGCTGTGAAGCAACACCATCTTaGCTGTTTCCATGCAGATCT +
Preference number: 4 (lower is better)
Translates to: RMNIKDTASNISIAVLSCEATPS*LFPCRS
Trigger: AGATCTGCATGGAAACAGGCAAGATGGTGTTGCTTC...ACAGCTCAGCACAGCTATTGATATGTTAGAGGCAGTATCCTTAATATTCATTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp CAATTTCAAAATGTCAGATCAGAAGAATCTTTGGCGATTAATCCACTCTCCATTTGCCTGAAGGAAATCTaGAAAGGAGTTGTGCCTCTG +
Preference number: 4 (lower is better)
Translates to: QFQNVRSEESLAINPLSICLKEI*KGVVPL
Trigger: CAGAGGCACAACTCCTTTGCAGATTTCCTTCAGGCA...AATGGAGAGTGGATTAATCGCCAAAGATTCTTCTGATCTGACATTTTGAAATTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp GGCATACGAACAATATCTCAACAAAGAGTTAACGAAAAAGGGAAAGGAAAACCTAGGCCGACGCCATTGTaGAGTTATTGTTCTCAGAAT +
Preference number: 4 (lower is better)
Translates to: GIRTISQQRVNEKGKGKPRPTPL*SYCSQN
Trigger: ATTCTGAGAACAATAACTCCACAATGGCGTCGGCCT...AGGTTTTCCTTTCCCTTTTTCGTTAACTCTTTGTTGAGATATTGTTCGTATGCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000319921.4
CDS-3UTR CCA 90 bp ATGGCATACGAACAATATCTCAACAAAGAGTTAACGAAAAAGGGAAAGGAAAACCAGTTTACTCCTCACTaGGCAGTCCACAGGCAAAAA +
Preference number: 4 (lower is better)
Translates to: MAYEQYLNKELTKKGKENQFTPH*AVHRQK
Trigger: TTTTTGCCTGTGGACTGCCCAGTGAGGAGTAAACTG...GTTTTCCTTTCCCTTTTTCGTTAACTCTTTGTTGAGATATTGTTCGTATGCCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000319921.4
CDS-3UTR CCA 90 bp CAATTTCAAAATGTCAGATCAGAAGAATCTTTGGCGATTAATCCACTCTCCATTTGTCCTCTAAGCCTTTaGTGTCCCAGCAACTATTGC +
Preference number: 4 (lower is better)
Translates to: QFQNVRSEESLAINPLSICPLSL*CPSNYC
Trigger: GCAATAGTTGCTGGGACACCAAAGGCTTAGAGGACA...AATGGAGAGTGGATTAATCGCCAAAGATTCTTCTGATCTGACATTTTGAAATTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp GGCATACGAACAATATCTCAACAAAGAGTTAACGAAAAAGGGAAAGGAAAACCTTTTGTGGTTAGACTCTaGGTCCCATCTGGAAGACAT +
Preference number: 4 (lower is better)
Translates to: GIRTISQQRVNEKGKGKPFVVRL*VPSGRH
Trigger: ATGTCTTCCAGATGGGACCCAGAGTCTAACCACAAA...AGGTTTTCCTTTCCCTTTTTCGTTAACTCTTTGTTGAGATATTGTTCGTATGCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000319921.4
CDS-3UTR CCA 90 bp GAGTCCTGGACAAGCATTTTGTATTTTTGTAGTTCTCACTCCTTAGGCCCAATTTCAGTTCATCATTTCTaGAGTAAGCACTGGTCTTCT +
Preference number: 4 (lower is better)
Translates to: ESWTSILYFCSSHSLGPISVHHF*SKHWSS
Trigger: AGAAGACCAGTGCTTACTCCAGAAATGATGAACTGA...AATTGGGCCTAAGGAGTGAGAACTACAAAAATACAAAATGCTTGTCCAGGACTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp TCACAATTTCAAAATGTCAGATCAGAAGAATCTTTGGCGATTAATCCACTCTCCTCCTCGGTTTGGGTTTaGGGGTTCTTTAGTTTCAAG +
Preference number: 4 (lower is better)
Translates to: SQFQNVRSEESLAINPLSSSVWV*GFFSFK
Trigger: CTTGAAACTAAAGAACCCCCAAACCCAAACCGAGGA...GGAGAGTGGATTAATCGCCAAAGATTCTTCTGATCTGACATTTTGAAATTGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp GAAAGTTTCAGAACATGTATGTACATGGTTCAGAAACAGCTCGGCTTTCAAAAAAGAGTGCTTCCGGTATaGATTGCAGGCAGCTATAAT +
Preference number: 4 (lower is better)
Translates to: ESFRTCMYMVQKQLGFQKRVLPV*IAGSYN
Trigger: ATTATAGCTGCCTGCAATCCATACCGGAAGCACTCT...TTTTTGAAAGCCGAGCTGTTTCTGAACCATGTACATACATGTTCTGAAACTTTC
40% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp GAAAGTTTCAGAACATGTATGTACATGGTTCAGAAACAGCTCGGCTTTCAAAAAATATACATAACCAGGTaGCTCAGAGGTAGCAGACTA +
Preference number: 4 (lower is better)
Translates to: ESFRTCMYMVQKQLGFQKIYITR*LRGSRL
Trigger: TAGTCTGCTACCTCTGAGTCACCTGGTTATGTATAT...TTTTTGAAAGCCGAGCTGTTTCTGAACCATGTACATACATGTTCTGAAACTTTC
39% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp TGCTGGCCAGTCTATCTTACACAAAGTTTTAAGTTTTCCTGGTGTCATAGTACTTTTTTATGTCTTGGCTaGGAACCACAGAAAGGACTA +
Preference number: 4 (lower is better)
Translates to: CWPVYLTQSFKFSWCHSTFLCLG*EPQKGL
Trigger: TAGTCCTTTCTGTGGTTCTCAGCCAAGACATAAAAA...AGTACTATGACACCAGGAAAACTTAAAACTTTGTGTAAGATAGACTGGCCAGCA
39% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR TCA 90 bp GAGTCCTGGACAAGCATTTTGTATTTTTGTAGTTCTCACTCCTTAGGCCCAATTGTTTTGTATGTGCTCTaGGTCCTAGTTTTTATGTCT +
Preference number: 4 (lower is better)
Translates to: ESWTSILYFCSSHSLGPIVLYVL*VLVFMS
Trigger: AGACATAAAAACTAGGACTCAGAGCACATACAAAAC...AATTGGGCCTAAGGAGTGAGAACTACAAAAATACAAAATGCTTGTCCAGGACTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp GAGTCCTGGACAAGCATTTTGTATTTTTGTAGTTCTCACTCCTTAGGCCCAATTGGTCTTGGTTTTGATTaGATCGTCTTAAATACTGGT +
Preference number: 4 (lower is better)
Translates to: ESWTSILYFCSSHSLGPIGLGFD*IVLNTG
Trigger: ACCAGTATTTAAGACGATTCAATCAAAACCAAGACC...AATTGGGCCTAAGGAGTGAGAACTACAAAAATACAAAATGCTTGTCCAGGACTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp CAATTTCAAAATGTCAGATCAGAAGAATCTTTGGCGATTAATCCACTCTCCATTAGTTTCGGACTTCTTTaGGGAATGAGTACTCGGTGT +
Preference number: 4 (lower is better)
Translates to: QFQNVRSEESLAINPLSISFGLL*GMSTRC
Trigger: ACACCGAGTACTCATTCCTCAAAGAAGTCCGAAACT...AATGGAGAGTGGATTAATCGCCAAAGATTCTTCTGATCTGACATTTTGAAATTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp ATGGCATACGAACAATATCTCAACAAAGAGTTAACGAAAAAGGGAAAGGAAAACAGGACAAAGCAAAACTaGTCGAACTGGGTGAAGAAG +
Preference number: 4 (lower is better)
Translates to: MAYEQYLNKELTKKGKENRTKQN*SNWVKK
Trigger: CTTCTTCACCCAGTTCGAGCAGTTTTGCTTTGTCCT...GTTTTCCTTTCCCTTTTTCGTTAACTCTTTGTTGAGATATTGTTCGTATGCCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000319921.4
CDS-3UTR GCA 90 bp CAATTTCAAAATGTCAGATCAGAAGAATCTTTGGCGATTAATCCACTCTCCATTAGGACAAAGCAAAACTaGTCGAACTGGGTGAAGAAG +
Preference number: 4 (lower is better)
Translates to: QFQNVRSEESLAINPLSIRTKQN*SNWVKK
Trigger: CTTCTTCACCCAGTTCGAGCAGTTTTGCTTTGTCCT...AATGGAGAGTGGATTAATCGCCAAAGATTCTTCTGATCTGACATTTTGAAATTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp AGAATGAATATTAAGGATACTGCCTCTAACATATCAATAGCTGTGCTGAGCTGTACAACCAGTCCAGGCTaGCTTCTAATAAAAGCTCAA +
Preference number: 4 (lower is better)
Translates to: RMNIKDTASNISIAVLSCTTSPG*LLIKAQ
Trigger: TTGAGCTTTTATTAGAAGGCAGCCTGGACTGGTTGT...ACAGCTCAGCACAGCTATTGATATGTTAGAGGCAGTATCCTTAATATTCATTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp TGCTGGCCAGTCTATCTTACACAAAGTTTTAAGTTTTCCTGGTGTCATAGTACTTGGGCACTCTTTCTTTaGCATTTTTCTGTTCCACAA +
Preference number: 4 (lower is better)
Translates to: CWPVYLTQSFKFSWCHSTWALFL*HFSVPQ
Trigger: TTGTGGAACAGAAAAATGGCAAAGAAAGAGTGCCCA...AGTACTATGACACCAGGAAAACTTAAAACTTTGTGTAAGATAGACTGGCCAGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR CCA 90 bp CAATTTCAAAATGTCAGATCAGAAGAATCTTTGGCGATTAATCCACTCTCCATTAGGCCGACGCCATTGTaGAGTTATTGTTCTCAGAAT +
Preference number: 4 (lower is better)
Translates to: QFQNVRSEESLAINPLSIRPTPL*SYCSQN
Trigger: ATTCTGAGAACAATAACTCCACAATGGCGTCGGCCT...AATGGAGAGTGGATTAATCGCCAAAGATTCTTCTGATCTGACATTTTGAAATTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp CAATTTCAAAATGTCAGATCAGAAGAATCTTTGGCGATTAATCCACTCTCCATTTTGGTCTCAGCTTCCTaGCAGTGTGTTTTGAAAGGA +
Preference number: 4 (lower is better)
Translates to: QFQNVRSEESLAINPLSILVSAS*QCVLKG
Trigger: TCCTTTCAAAACACACTGCCAGGAAGCTGAGACCAA...AATGGAGAGTGGATTAATCGCCAAAGATTCTTCTGATCTGACATTTTGAAATTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp TGCTGGCCAGTCTATCTTACACAAAGTTTTAAGTTTTCCTGGTGTCATAGTACTTATCTAGGTGCTTCTTaGAAATGCAGACAATGCCTT +
Preference number: 4 (lower is better)
Translates to: CWPVYLTQSFKFSWCHSTYLGAS*KCRQCL
Trigger: AAGGCATTGTCTGCATTTCCAAGAAGCACCTAGATA...AGTACTATGACACCAGGAAAACTTAAAACTTTGTGTAAGATAGACTGGCCAGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR CCA 90 bp GATGAGAAAGTTTCAGAACATGTATGTACATGGTTCAGAAACAGCTCGGCTTTCTTTTGGATCCCTCACTaGAGGCTTAATGATGTTTAT +
Preference number: 4 (lower is better)
Translates to: DEKVSEHVCTWFRNSSAFFWIPH*RLNDVY
Trigger: ATAAACATCATTAAGCCTCCAGTGAGGGATCCAAAA...GAAAGCCGAGCTGTTTCTGAACCATGTACATACATGTTCTGAAACTTTCTCATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp AGAATGAATATTAAGGATACTGCCTCTAACATATCAATAGCTGTGCTGAGCTGTTGTACTCTTGGTCCTTaGGGAAACCAGAACCAAAAA +
Preference number: 4 (lower is better)
Translates to: RMNIKDTASNISIAVLSCCTLGP*GNQNQK
Trigger: TTTTTGGTTCTGGTTTCCCCAAGGACCAAGAGTACA...ACAGCTCAGCACAGCTATTGATATGTTAGAGGCAGTATCCTTAATATTCATTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp GTCTCTTCTAAAAATACAAAAGGAACCGAGTGTGGCGGCACATTGTTCTTTAAAGCTGGTGCTTGTAAATaGACTCATACTCAAAAGATT +
Preference number: 4 (lower is better)
Translates to: VSSKNTKGTECGGTLFFKAGACK*THTQKI
Trigger: AATCTTTTGAGTATGAGTTCATTTACAAGCACCAGC...TTTAAAGAACAATGTGCCGCCACACTCGGTTCCTTTTGTATTTTTAGAAGAGAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000319921.4
CDS-3UTR TCA 90 bp GTCTCTTCTAAAAATACAAAAGGAACCGAGTGTGGCGGCACATTGTTCTTTAAAGAAGACTGTTTGGACTaGATTATTTCCAGTTTCATC +
Preference number: 4 (lower is better)
Translates to: VSSKNTKGTECGGTLFFKEDCLD*IISSFI
Trigger: GATGAAACTGGAAATAATTCAGTCCAAACAGTCTTC...TTTAAAGAACAATGTGCCGCCACACTCGGTTCCTTTTGTATTTTTAGAAGAGAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000319921.4
CDS-3UTR TCA 90 bp GAAAGTTTCAGAACATGTATGTACATGGTTCAGAAACAGCTCGGCTTTCAAAAATCTTGGCATCCTCTGTaGCATTTGCTAGTATTTTCT +
Preference number: 4 (lower is better)
Translates to: ESFRTCMYMVQKQLGFQKSWHPL*HLLVFS
Trigger: AGAAAATACTAGCAAATGTCACAGAGGATGCCAAGA...TTTTTGAAAGCCGAGCTGTTTCTGAACCATGTACATACATGTTCTGAAACTTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp GAAAGTTTCAGAACATGTATGTACATGGTTCAGAAACAGCTCGGCTTTCAAAAAGCATGGTCAAGAGAATaGAATCCTTCAAGTAACACT +
Preference number: 4 (lower is better)
Translates to: ESFRTCMYMVQKQLGFQKAWSRE*NPSSNT
Trigger: AGTGTTACTTGAAGGATTTCATTCTCTTGACCATGC...TTTTTGAAAGCCGAGCTGTTTCTGAACCATGTACATACATGTTCTGAAACTTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp CAATTTCAAAATGTCAGATCAGAAGAATCTTTGGCGATTAATCCACTCTCCATTCTAGATATTCATACATaGGAGAGCACACTGAGACTG +
Preference number: 4 (lower is better)
Translates to: QFQNVRSEESLAINPLSILDIHT*ESTLRL
Trigger: CAGTCTCAGTGTGCTCTCGCATGTATGAATATCTAG...AATGGAGAGTGGATTAATCGCCAAAGATTCTTCTGATCTGACATTTTGAAATTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp GAAAGTTTCAGAACATGTATGTACATGGTTCAGAAACAGCTCGGCTTTCAAAAAATCTTCATTTTGTCGTaGAACCTCTTCACGTACAGA +
Preference number: 4 (lower is better)
Translates to: ESFRTCMYMVQKQLGFQKIFILS*NLFTYR
Trigger: TCTGTACGTGAAGAGGTTGCACGACAAAATGAAGAT...TTTTTGAAAGCCGAGCTGTTTCTGAACCATGTACATACATGTTCTGAAACTTTC
38% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp GATGAGAAAGTTTCAGAACATGTATGTACATGGTTCAGAAACAGCTCGGCTTTCTTTTTCACATCATCGTaGGAACCCAGAAATATATGT +
Preference number: 4 (lower is better)
Translates to: DEKVSEHVCTWFRNSSAFFFTSS*EPRNIC
Trigger: ACATATATTTCTGGGTTCCCACGATGATGTGAAAAA...GAAAGCCGAGCTGTTTCTGAACCATGTACATACATGTTCTGAAACTTTCTCATC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR TCA 90 bp GAAAGTTTCAGAACATGTATGTACATGGTTCAGAAACAGCTCGGCTTTCAAAAATTAATCTTTTACTGCTaGGGTCTTGTGAGTGTCTTA +
Preference number: 4 (lower is better)
Translates to: ESFRTCMYMVQKQLGFQKLIFYC*GLVSVL
Trigger: TAAGACACTCACAAGACCTCAGCAGTAAAAGATTAA...TTTTTGAAAGCCGAGCTGTTTCTGAACCATGTACATACATGTTCTGAAACTTTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR GCA 90 bp TTTTTCCAGCTGGAAACGGGATTCGTAATGGTAATGGTTGAACTTAATGAACGTCTTCTGGAAATGATGTaGTTTGACATTGATGAACTT +
Preference number: 4 (lower is better)
Translates to: FFQLETGFVMVMVELNERLLEMM*FDIDEL
Trigger: AAGTTCATCAATGTCAAAGCACATCATTTCCAGAAG...ACGTTCATTAAGTTCAACCATTACCATTACGAATCCCGTTTCCAGCTGGAAAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR CCA 90 bp GAAAGTTTCAGAACATGTATGTACATGGTTCAGAAACAGCTCGGCTTTCAAAAACCTGACTTTAGATCCTaGTGCAACTTAATGAACTTT +
Preference number: 4 (lower is better)
Translates to: ESFRTCMYMVQKQLGFQKPDFRS*CNLMNF
Trigger: AAAGTTCATTAAGTTGCACCAGGATCTAAAGTCAGG...TTTTTGAAAGCCGAGCTGTTTCTGAACCATGTACATACATGTTCTGAAACTTTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CCA 90 bp CAATTTCAAAATGTCAGATCAGAAGAATCTTTGGCGATTAATCCACTCTCCATTCAAGTTTCTTGTGTCTaGGCAGTTTATCAAAGTCGA +
Preference number: 4 (lower is better)
Translates to: QFQNVRSEESLAINPLSIQVSCV*AVYQSR
Trigger: TCGACTTTGATAAACTGCCCAGACACAAGAAACTTG...AATGGAGAGTGGATTAATCGCCAAAGATTCTTCTGATCTGACATTTTGAAATTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS GCA 90 bp CGGTGGGCGCGGAGAGGCCGTCACCCTCCAGTGGCGTGGTGGCTGTaGCTGGGGGCTGGCTCGGCTGGCCAGTGGGGCCACTCTGCTGGG +
Preference number: 5 (lower is better)
Translates to: RWARRGRHPPVAWWL*LGAGSAGQWGHSAG
Trigger: CCCAGCAGAGTGGCCCCACTGGCCAGCCGAGCCAGCCCCCAGGCACAGCCACCACGCCACTGGAGGGTGACGGCCTCTCCGCGCCCACCG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000319921.4
ENST00000508628.6
ENST00000559070.5
ENST00000582970.5
CDS CCA 90 bp CCAGTGGCGTGGTGGCTGTGCCTGGGGGCTGGCTCGGCTGGCCAGTaGGGCCACTCTGCTGGGCTTGGCTGTGGGGCAGGGCTGTGTCCT +
Preference number: 5 (lower is better)
Translates to: PVAWWLCLGAGSAGQ*GHSAGLGCGAGLCP
Trigger: AGGACACAGCCCTGCCCCACAGCCAAGCCCAGCAGAGTGGCCCCACTGGCCAGCCGAGCCAGCCCCCAGGCACAGCCACCACGCCACTGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000319921.4
ENST00000508628.6
ENST00000582970.5
CDS CCA 90 bp CCTCTCCCAAAGCCTGGGCCTGCAGGGGGCTGTCGCCAACCTCGGTaGGCGCGGAGAGGCCGTCACCCTCCAGTGGCGTGGTGGCTGTGC +
Preference number: 5 (lower is better)
Translates to: PLPKPGPAGGCRQPR*ARRGRHPPVAWWLC
Trigger: GCACAGCCACCACGCCACTGGAGGGTGACGGCCTCTCCGCGCCCACCGAGGTTGGCGACAGCCCCCTGCAGGCCCAGGCTTTGGGAGAGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000319921.4
ENST00000508628.6
ENST00000559070.5
ENST00000582970.5
CDS CCA 90 bp GGGCGGCCGGGCTTGGAGAGGCCCTGCACGAACTCCATCCCCCGCTaGCTGCTGAGCTTCCGCACCAGGTACACCCGGTGCCAGTCGTTC +
Preference number: 5 (lower is better)
Translates to: GRPGLERPCTNSIPR*LLSFRTRYTRCQSF
Trigger: GAACGACTGGCACCGGGTGTACCTGGTGCGGAAGCTCAGCAGCCAGCGGGGGATGGAGTTCGTGCAGGGCCTCTCCAAGCCCGGCCGCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000411702.7
ENST00000508628.6
ENST00000558116.5
ENST00000582970.5
CDS GCA 90 bp TTGGGAAACACCCACTGGTGCGGGCGGCCGGGCTTGGAGAGGCCCTaGACGAACTCCATCCCCCGCTGGCTGCTGAGCTTCCGCACCAGG +
Preference number: 5 (lower is better)
Translates to: LGNTHWCGRPGLERP*TNSIPRWLLSFRTR
Trigger: CCTGGTGCGGAAGCTCAGCAGCCAGCGGGGGATGGAGTTCGTGCAGGGCCTCTCCAAGCCCGGCCGCCCGCACCAGTGGGTGTTTCCCAA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000411702.7
ENST00000508628.6
ENST00000558116.5
ENST00000582970.5
CDS CCA 90 bp CCAGGGCGGCTGGCAACACCTCGGAGTGGCCACAGACGACGAGGTTaGGCTGGCCGACCTGCAGACCTCTCGGGAGACAACGCTCCACGG +
Preference number: 5 (lower is better)
Translates to: PGRLATPRSGHRRRG*AGRPADLSGDNAPR
Trigger: CCGTGGAGCGTTGTCTCCCGAGAGGTCTGCAGGTCGGCCAGCCCAACCTCGTCGTCTGTGGCCACTCCGAGGTGTTGCCAGCCGCCCTGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS TCA 90 bp CGGGCTTGGAGAGGCCCTGCACGAACTCCATCCCCCGCTGGCTGCTaGGCTTCCGCACCAGGTACACCCGGTGCCAGTCGTTCTCCACCC +
Preference number: 5 (lower is better)
Translates to: RAWRGPARTPSPAGC*ASAPGTPGASRSPP
Trigger: GGGTGGAGAACGACTGGCACCGGGTGTACCTGGTGCGGAAGCTCAGCAGCCAGCGGGGGATGGAGTTCGTGCAGGGCCTCTCCAAGCCCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000411702.7
ENST00000508628.6
ENST00000558116.5
ENST00000582970.5
CDS GCA 90 bp CGCAGCCCCTGCTGCTTGACAACGTCCTTGGGAAACACCCACTGGTaGGGGCGGCCGGGCTTGGAGAGGCCCTGCACGAACTCCATCCCC +
Preference number: 5 (lower is better)
Translates to: RSPCCLTTSLGNTHW*GRPGLERPCTNSIP
Trigger: GGGGATGGAGTTCGTGCAGGGCCTCTCCAAGCCCGGCCGCCCGCACCAGTGGGTGTTTCCCAAGGACGTTGTCAAGCAGCAGGGGCTGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000411702.7
ENST00000508628.6
ENST00000558116.5
ENST00000573038.1
ENST00000582970.5
CDS CCA 90 bp GCGGCTGGCAACACCTCGGAGTGGCCACAGACGACGAGGTTGGGCTaGCCGACCTGCAGACCTCTCGGGAGACAACGCTCCACGGGAGAC +
Preference number: 5 (lower is better)
Translates to: AAGNTSEWPQTTRLG*PTCRPLGRQRSTGD
Trigger: GTCTCCCGTGGAGCGTTGTCTCCCGAGAGGTCTGCAGGTCGGCCAGCCCAACCTCGTCGTCTGTGGCCACTCCGAGGTGTTGCCAGCCGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS CCA 90 bp GGGCAGGGGCTGGCTTGGGGTTTGCATGTAGACAGCCAGGGCGGCTaGCAACACCTCGGAGTGGCCACAGACGACGAGGTTGGGCTGGCC +
Preference number: 5 (lower is better)
Translates to: GQGLAWGLHVDSQGG*QHLGVATDDEVGLA
Trigger: GGCCAGCCCAACCTCGTCGTCTGTGGCCACTCCGAGGTGTTGCCAGCCGCCCTGGCTGTCTACATGCAAACCCCAAGCCAGCCCCTGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS CCA 90 bp GTCAGCATCTCCGTGCAGGCCATTGCGGCAAATGCGTCCAGGGTCTaGGGAGACGGACAGCAGGGCGTGGCTGAGCGGTGCCCCTCCCAC +
Preference number: 5 (lower is better)
Translates to: VSISVQAIAANASRV*GDGQQGVAERCPSH
Trigger: GTGGGAGGGGCACCGCTCAGCCACGCCCTGCTGTCCGTCTCCCCAGACCCTGGACGCATTTGCCGCAATGGCCTGCACGGAGATGCTGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558488.1
CDS-3UTR CAA 90 bp AGCTCCGAGTGCAAGTTGAAGACTTCAGCAAGCCAGCCCCCGGCCCCCACACCCTCTCTCCGCTGCGGGTaGCCCAGCACGTGGCCGGTC +
Preference number: 5 (lower is better)
Translates to: SSECKLKTSASQPPAPTPSLRCG*PSTWPV
Trigger: GACCGGCCACGTGCTGGGCAACCCGCAGCGGAGAGA...GGGTGTGGGGGCCGGGGGCTGGCTTGCTGAAGTCTTCAACTTGCACTCGGAGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS GCA 90 bp ACCACTGGGGGCAGCCCTCGGTCACATGTCACCACGTCTCTCCGCTaGGGGTTGCCCAGCACGTGGCCGGTCTGCGTTCTGTCTGCCTTG +
Preference number: 5 (lower is better)
Translates to: TTGGSPRSHVTTSLR*GLPSTWPVCVLSAL
Trigger: CAAGGCAGACAGAACGCAGACCGGCCACGTGCTGGGCAACCCGCAGCGGAGAGACGTGGTGACATGTGACCGAGGGCTGCCCCCAGTGGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000411702.7
ENST00000508628.6
ENST00000558116.5
ENST00000582970.5
CDS CCA 90 bp TGCCGCAGCCCCTGCTGCTTGACAACGTCCTTGGGAAACACCCACTaGTGCGGGCGGCCGGGCTTGGAGAGGCCCTGCACGAACTCCATC +
Preference number: 5 (lower is better)
Translates to: CRSPCCLTTSLGNTH*CGRPGLERPCTNSI
Trigger: GATGGAGTTCGTGCAGGGCCTCTCCAAGCCCGGCCGCCCGCACCAGTGGGTGTTTCCCAAGGACGTTGTCAAGCAGCAGGGGCTGCGGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000411702.7
ENST00000508628.6
ENST00000558116.5
ENST00000573038.1
ENST00000582970.5
CDS CCA 90 bp CTGAGTAGGCAGCCGGGCCCTGCATGGCGTCTGCCACGATGGTCTTaGCGAGAGACTTGGAGCTGCCGGGCTTCCCCACCAGGAAGAGGG +
Preference number: 5 (lower is better)
Translates to: LSRQPGPAWRLPRWS*RETWSCRASPPGRG
Trigger: CCCTCTTCCTGGTGGGGAAGCCCGGCAGCTCCAAGTCTCTCGCCAAGACCATCGTGGCAGACGCCATGCAGGGCCCGGCTGCCTACTCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp GGGCAGCCGTGGCCAGCAGGGAGCTTCCTCATGTGGCATTGCCTGCGAGACTGTGCCACTCTGCTGGGCTaGGCTGTGGGGCAGGGCTGT +
Preference number: 5 (lower is better)
Translates to: GQPWPAGSFLMWHCLRDCATLLG*AVGQGC
Trigger: ACAGCCCTGCCCCACAGCCAAGCCCAGCAGAGTGGC...ACAGTCTCGCAGGCAATGCCACATGAGGAAGCTCCCTGCTGGCCACGGCTGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319921.4
CDS TCA 90 bp CACCTGCTCGCTCCGAGGCCACGATCCCAACACACAGCCGGTCATTaGACACGGCTGCCGCCGACAGGGTCTGCTTCGGGACCCGGTAGT +
Preference number: 5 (lower is better)
Translates to: HLLAPRPRSQHTAGH*TRLPPTGSASGPGS
Trigger: ACTACCGGGTCCCGAAGCAGACCCTGTCGGCGGCAGCCGTGTTCAATGACCGGCTGTGTGTTGGGATCGTGGCCTCGGAGCGAGCAGGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS GCA 90 bp CCCGCCCAGCCCTTGCCCCTTTCCTCACTTCTGCTAGAGAGCTGGTaGTGCTCTTGGAGAAGCCTGCGCAGGACGAGGTGGACCACGCCG +
Preference number: 5 (lower is better)
Translates to: PAQPLPLSSLLLESW*CSWRSLRRTRWTTP
Trigger: CGGCGTGGTCCACCTCGTCCTGCGCAGGCTTCTCCAAGAGCAGCACCAGCTCTCTAGCAGAAGTGAGGAAAGGGGCAAGGGCTGGGCGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411702.7
ENST00000558116.5
CDS GCA 90 bp AACACCTCGGAGTGGCCACAGACGACGAGGTTGGGCTGGCCGACCTaGAGACCTCTCGGGAGACAACGCTCCACGGGAGACCCACCCATC +
Preference number: 5 (lower is better)
Translates to: NTSEWPQTTRLGWPT*RPLGRQRSTGDPPI
Trigger: GATGGGTGGGTCTCCCGTGGAGCGTTGTCTCCCGAGAGGTCTGCAGGTCGGCCAGCCCAACCTCGTCGTCTGTGGCCACTCCGAGGTGTT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS GCA 90 bp AGCGGCGCAGCAACAGTGCCACCTCCTCAAAGGTGGTTGCCGGGGTaGAGAGCAGCACCTCATCGTAAGTGGGCAGGGGCTGGCTTGGGG +
Preference number: 5 (lower is better)
Translates to: SGAATVPPPQRWLPG*RAAPHRKWAGAGLG
Trigger: CCCCAAGCCAGCCCCTGCCCACTTACGATGAGGTGCTGCTCTGCACCCCGGCAACCACCTTTGAGGAGGTGGCACTGTTGCTGCGCCGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS GCA 90 bp CTCCGAGGCCACGATCCCAACACACAGCCGGTCATTGAACACGGCTaGCGCCGACAGGGTCTGCTTCGGGACCCGGTAGTGACCTGCCAG +
Preference number: 5 (lower is better)
Translates to: LRGHDPNTQPVIEHG*RRQGLLRDPVVTCQ
Trigger: CTGGCAGGTCACTACCGGGTCCCGAAGCAGACCCTGTCGGCGGCAGCCGTGTTCAATGACCGGCTGTGTGTTGGGATCGTGGCCTCGGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS CCA 90 bp CTGCTGAAAGCGGGCGCACTGCCGGAAGGTGCTGATGATGCCCTGTaGGGTGGAGTGCGGGCTGCACTGGAAGGACACCAGGTGGACCTG +
Preference number: 5 (lower is better)
Translates to: LLKAGALPEGADDAL*GGVRAALEGHQVDL
Trigger: CAGGTCCACCTGGTGTCCTTCCAGTGCAGCCCGCACTCCACCCCACAGGGCATCATCAGCACCTTCCGGCAGTGCGCCCGCTTTCAGCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp GGAGAACGGAGCACAGTTCCTTCCGTGCCTCCTGCCGGCGCTGCTCAAGGTGTGGGGTCAAGGGCCCAGTaGGAGATGCCCACGAAGCCG +
Preference number: 5 (lower is better)
Translates to: GERSTVPSVPPAGAAQGVGSRAQ*EMPTKP
Trigger: CGGCTTCGTGGGCATCTCCAACTGGGCCCTTGACCC...CACACCTTGAGCAGCGCCGGCAGGAGGCACGGAAGGAACTGTGCTCCGTTCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS TCA 90 bp TCTGGTGAAGTTCCTCCGTCAAGGCCCGGGGACCCTGCCTCTCTATaGCCTGCAGCACCACAGACGCGCAGGCGTCCGAGTGGTAGCCGA +
Preference number: 5 (lower is better)
Translates to: SGEVPPSRPGDPASL*PAAPQTRRRPSGSR
Trigger: TCGGCTACCACTCGGACGCCTGCGCGTCTGTGGTGCTGCAGGTCATAGAGAGGCAGGGTCCCCGGGCCTTGACGGAGGAACTTCACCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS TCA 90 bp AAGGTCACGGGTGCGGGTGAGGCAGAGGCTGAGGCTGTGTTTGGCTaGGTGGCCACTGTTGCTGGACACCACTGCGTGGCCACAGAGGGG +
Preference number: 5 (lower is better)
Translates to: KVTGAGEAEAEAVFG*VATVAGHHCVATEG
Trigger: CCCCTCTGTGGCCACGCAGTGGTGTCCAGCAACAGTGGCCACTCAGCCAAACACAGCCTCAGCCTCTGCCTCACCCGCACCCGTGACCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559603.1
CDS GCA 90 bp TCTGAGCCCGGGAACAAGCACGGGCCCCCTTCCTCCTTCAGCTCCTaGCCACACTCCATTTCACCCTCCGAGGCCGACGCCATTGTGGAG +
Preference number: 5 (lower is better)
Translates to: SEPGNKHGPPSSFSS*PHSISPSEADAIVE
Trigger: CTCCACAATGGCGTCGGCCTCGGAGGGTGAAATGGAGTGTGGGCAGGAGCTGAAGGAGGAAGGGGGCCCGTGCTTGTTCCCGGGCTCAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000319921.4
ENST00000508628.6
ENST00000582970.5
CDS GCA 90 bp GTTGTGCCTCTGTCTGTGAAAGTACTCCTGCGACAGCCACTCCGCTaGGAACCCGCCCAGCGAGTAGGCGCTCAGCCGGACCACGGCATC +
Preference number: 5 (lower is better)
Translates to: VVPLSVKVLLRQPLR*EPAQRVGAQPDHGI
Trigger: GATGCCGTGGTCCGGCTGAGCGCCTACTCGCTGGGCGGGTTCGCAGCGGAGTGGCTGTCGCAGGAGTACTTTCACAGACAGAGGCACAAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS CCA 90 bp CGGGGTGCAGAGCAGCACCTCATCGTAAGTGGGCAGGGGCTGGCTTaGGGTTTGCATGTAGACAGCCAGGGCGGCTGGCAACACCTCGGA +
Preference number: 5 (lower is better)
Translates to: RGAEQHLIVSGQGLA*GLHVDSQGGWQHLG
Trigger: TCCGAGGTGTTGCCAGCCGCCCTGGCTGTCTACATGCAAACCCCAAGCCAGCCCCTGCCCACTTACGATGAGGTGCTGCTCTGCACCCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS CCA 90 bp AGAGATCTGAGTAGGCAGCCGGGCCCTGCATGGCGTCTGCCACGATaGTCTTGGCGAGAGACTTGGAGCTGCCGGGCTTCCCCACCAGGA +
Preference number: 5 (lower is better)
Translates to: RDLSRQPGPAWRLPR*SWRETWSCRASPPG
Trigger: TCCTGGTGGGGAAGCCCGGCAGCTCCAAGTCTCTCGCCAAGACCATCGTGGCAGACGCCATGCAGGGCCCGGCTGCCTACTCAGATCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS CCA 90 bp GCTTCAGGCTGCGGAAGAGATCTGAGTAGGCAGCCGGGCCCTGCATaGCGTCTGCCACGATGGTCTTGGCGAGAGACTTGGAGCTGCCGG +
Preference number: 5 (lower is better)
Translates to: ASGCGRDLSRQPGPA*RLPRWSWRETWSCR
Trigger: CCGGCAGCTCCAAGTCTCTCGCCAAGACCATCGTGGCAGACGCCATGCAGGGCCCGGCTGCCTACTCAGATCTCTTCCGCAGCCTGAAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS CCA 90 bp GCAAAGTCTGTGCTCTCCAGAGAGACGCGTCCAGTACCGCGGGATTaGCACCTGCACTCCGGAGGGGTGAGCAGACAGCCTGCTGCCACG +
Preference number: 5 (lower is better)
Translates to: AKSVLSRETRPVPRD*HLHSGGVSRQPAAT
Trigger: CGTGGCAGCAGGCTGTCTGCTCACCCCTCCGGAGTGCAGGTGCCAATCCCGCGGTACTGGACGCGTCTCTCTGGAGAGCACAGACTTTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573548.1
CDS-3UTR CAA 90 bp GGGGTGGGCAGTGCCAGAGGCGAACGGGCACAGGTCATTACTGCGTGTGTGGCTCCTCCTCAAAGGTGGTaGCCGGGGTGCAGAGCAGCA +
Preference number: 5 (lower is better)
Translates to: GVGSARGERAQVITACVAPPQRW*PGCRAA
Trigger: TGCTGCTCTGCACCCCGGCAACCACCTTTGAGGAGG...AGCCACACACGCAGTAATGACCTGTGCCCGTTCGCCTCTGGCACTGCCCACCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp TCAGCAAGCCAGCCCCCGGCCCCCACACCCGTTCATAGGCAGTCGGAATGCAGAACACACAGCCGGTCATaGAACACGGCTGCCGCCGAC +
Preference number: 5 (lower is better)
Translates to: SASQPPAPTPVHRQSECRTHSRS*NTAAAD
Trigger: GTCGGCGGCAGCCGTGTTCAATGACCGGCTGTGTGT...TCTGCATTCCGACTGCCTATGAACGGGTGTGGGGGCCGGGGGCTGGCTTGCTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS TCA 90 bp GCACCACCCTCCGCATATTGCGCGTGCAGCTCTCGTTCTGGTCTCTaGGCATGCCCACGGCGCTCTGCACACAGCTTCTCAGCAGCCTGG +
Preference number: 5 (lower is better)
Translates to: APPSAYCACSSRSGL*ACPRRSAHSFSAAW
Trigger: CCAGGCTGCTGAGAAGCTGTGTGCAGAGCGCCGTGGGCATGCTCAGAGACCAGAACGAGAGCTGCACGCGCAATATGCGGAGGGTGGTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS GCA 90 bp GCCCAGCCCTTGCCCCTTTCCTCACTTCTGCTAGAGAGCTGGTGCTaGTCTTGGAGAAGCCTGCGCAGGACGAGGTGGACCACGCCGATG +
Preference number: 5 (lower is better)
Translates to: AQPLPLSSLLLESWC*SWRSLRRTRWTTPM
Trigger: CATCGGCGTGGTCCACCTCGTCCTGCGCAGGCTTCTCCAAGAGCAGCACCAGCTCTCTAGCAGAAGTGAGGAAAGGGGCAAGGGCTGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411702.7
ENST00000558116.5
CDS GCA 90 bp ATCATCTGCTCTGAGGCAAACCAGGCCCTGAGGCAGCGCAGGCAGTaGACGTGGTCGCAGGGCAGACAGACGGGGTCCTTTGCATCTCCC +
Preference number: 5 (lower is better)
Translates to: IICSEANQALRQRRQ*TWSQGRQTGSFASP
Trigger: GGGAGATGCAAAGGACCCCGTCTGTCTGCCCTGCGACCACGTGCACTGCCTGCGCTGCCTCAGGGCCTGGTTTGCCTCAGAGCAGATGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000508628.6
ENST00000558116.5
ENST00000582970.5
CDS CCA 90 bp ATCCCCGCCCAGCCCTTGCCCCTTTCCTCACTTCTGCTAGAGAGCTaGTGCTGCTCTTGGAGAAGCCTGCGCAGGACGAGGTGGACCACG +
Preference number: 5 (lower is better)
Translates to: IPAQPLPLSSLLLES*CCSWRSLRRTRWTT
Trigger: CGTGGTCCACCTCGTCCTGCGCAGGCTTCTCCAAGAGCAGCACCAGCTCTCTAGCAGAAGTGAGGAAAGGGGCAAGGGCTGGGCGGGGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000411702.7
ENST00000558116.5
CDS-3UTR CAA 90 bp AGAGGTGTAAGCGTTTCAGTCCCAGATCGGCTACAGGGAGTGGCGCTCAGCTCCGCCACTCTGCTGGGCTaGGCTGTGGGGCAGGGCTGT +
Preference number: 5 (lower is better)
Translates to: RGVSVSVPDRLQGVALSSATLLG*AVGQGC
Trigger: ACAGCCCTGCCCCACAGCCAAGCCCAGCAGAGTGGC...GGAGCTGAGCGCCACTCCCTGTAGCCGATCTGGGACTGAAACGCTTACACCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR CAA 90 bp GGAGAACGGAGCACAGTTCCTTCCGTGCCTCCTGCCGGCGCTGCTCAAGGTGTGCGCAGCCCCTGCTGCTaGACAACGTCCTTGGGAAAC +
Preference number: 5 (lower is better)
Translates to: GERSTVPSVPPAGAAQGVRSPCC*TTSLGN
Trigger: GTTTCCCAAGGACGTTGTCAAGCAGCAGGGGCTGCG...CACACCTTGAGCAGCGCCGGCAGGAGGCACGGAAGGAACTGTGCTCCGTTCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp CGGGGGCCTGCTACACACTGCTCTGGCCAGGCATTCCACTGGGGCAATTGCCTGCGCAGCCCCTGCTGCTaGACAACGTCCTTGGGAAAC +
Preference number: 5 (lower is better)
Translates to: RGPATHCSGQAFHWGNCLRSPCC*TTSLGN
Trigger: GTTTCCCAAGGACGTTGTCAAGCAGCAGGGGCTGCG...CAGGCAATTGCCCCAGTGGAATGCCTGGCCAGAGCAGTGTGTAGCAGGCCCCCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR CAA 90 bp GGGGTGGGCAGTGCCAGAGGCGAACGGGCACAGGTCATTACTGCGTGTGTGGCTAGAGTGGGTATTCCCTaGAGGCTCAGCCGGGGCTTG +
Preference number: 5 (lower is better)
Translates to: GVGSARGERAQVITACVARVGIP*RLSRGL
Trigger: CAAGCCCCGGCTGAGCCTCAAGGGAATACCCACTCT...AGCCACACACGCAGTAATGACCTGTGCCCGTTCGCCTCTGGCACTGCCCACCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp GGGGTGGGCAGTGCCAGAGGCGAACGGGCACAGGTCATTACTGCGTGTGTGGCTACCTGCAAGATGACCTaGGCTGCGTGGACAGCCTGG +
Preference number: 5 (lower is better)
Translates to: GVGSARGERAQVITACVATCKMT*AAWTAW
Trigger: CCAGGCTGTCCACGCAGCCAAGGTCATCTTGCAGGT...AGCCACACACGCAGTAATGACCTGTGCCCGTTCGCCTCTGGCACTGCCCACCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp AGCTCCGAGTGCAAGTTGAAGACTTCAGCAAGCCAGCCCCCGGCCCCCACACCCACCACCCTCCGCATATaGCGCGTGCAGCTCTCGTTC +
Preference number: 5 (lower is better)
Translates to: SSECKLKTSASQPPAPTPTTLRI*RVQLSF
Trigger: GAACGAGAGCTGCACGCGCAATATGCGGAGGGTGGT...GGGTGTGGGGGCCGGGGGCTGGCTTGCTGAAGTCTTCAACTTGCACTCGGAGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS TCA 90 bp GCCATTGCCCTTGGCGAGGGAGGAGGGTGCCCACTTCCCAATCTCTaGGTTAGCGGAGGAGCTGAGACCCAGCGGGTGCTTCATAGCCCT +
Preference number: 5 (lower is better)
Translates to: AIALGEGGGCPLPNL*VSGGAETQRVLHSP
Trigger: AGGGCTATGAAGCACCCGCTGGGTCTCAGCTCCTCCGCTAACTCAGAGATTGGGAAGTGGGCACCCTCCTCCCTCGCCAAGGGCAATGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319921.4
CDS TCA 90 bp CTGGAAGGACACCAGGTGGACCTGCTTCAGGCTGCGGAAGAGATCTaGGTAGGCAGCCGGGCCCTGCATGGCGTCTGCCACGATGGTCTT +
Preference number: 5 (lower is better)
Translates to: LEGHQVDLLQAAEEI*VGSRALHGVCHDGL
Trigger: AAGACCATCGTGGCAGACGCCATGCAGGGCCCGGCTGCCTACTCAGATCTCTTCCGCAGCCTGAAGCAGGTCCACCTGGTGTCCTTCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS GCA 90 bp GGAGACATGCTGGCACGAAGGACACTCCATGGGTCCTGCTGGGACTaGCCTGCAGATCCAGAAGCAAGAGCAGGAGTCGCTGGCAGCCTG +
Preference number: 5 (lower is better)
Translates to: GDMLARRTLHGSCWD*PADPEARAGVAGSL
Trigger: CAGGCTGCCAGCGACTCCTGCTCTTGCTTCTGGATCTGCAGGGCAGTCCCAGCAGGACCCATGGAGTGTCCTTCGTGCCAGCATGTCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319921.4
ENST00000508628.6
ENST00000582970.5
CDS GCA 90 bp GCAGGACAGGCAGGGCGCCCAGCCAGGTGTACGTCCTTGTGTCCATaGATCTTTGGCACAGGTTCACCAGGTACAGCCGCCAGCTCTGAG +
Preference number: 5 (lower is better)
Translates to: AGQAGRPARCTSLCP*IFGTGSPGTAASSE
Trigger: CTCAGAGCTGGCGGCTGTACCTGGTGAACCTGTGCCAAAGATGCATGGACACAAGGACGTACACCTGGCTGGGCGCCCTGCCTGTCCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319921.4
ENST00000508628.6
ENST00000559070.5
ENST00000574060.1
ENST00000582970.5
CDS GCA 90 bp TCCATCCCCCGCTGGCTGCTGAGCTTCCGCACCAGGTACACCCGGTaGCAGTCGTTCTCCACCCGGATACAGAACTGCTTGACTTGCTGC +
Preference number: 5 (lower is better)
Translates to: SIPRWLLSFRTRYTR*QSFSTRIQNCLTCC
Trigger: GCAGCAAGTCAAGCAGTTCTGTATCCGGGTGGAGAACGACTGGCACCGGGTGTACCTGGTGCGGAAGCTCAGCAGCCAGCGGGGGATGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000411702.7
ENST00000508628.6
ENST00000558116.5
ENST00000582970.5
CDS GCA 90 bp CGCGTGCAGCTCTCGTTCTGGTCTCTGAGCATGCCCACGGCGCTCTaGACACAGCTTCTCAGCAGCCTGGTGGTGTCCAGGATCGACACA +
Preference number: 5 (lower is better)
Translates to: RVQLSFWSLSMPTAL*TQLLSSLVVSRIDT
Trigger: TGTGTCGATCCTGGACACCACCAGGCTGCTGAGAAGCTGTGTGCAGAGCGCCGTGGGCATGCTCAGAGACCAGAACGAGAGCTGCACGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS GCA 90 bp ACGCCTGGGGACTGGGCTTCAGGGTGTTTCTTGTCAGCATCTCCGTaGAGGCCATTGCGGCAAATGCGTCCAGGGTCTGGGGAGACGGAC +
Preference number: 5 (lower is better)
Translates to: TPGDWASGCFLSASP*RPLRQMRPGSGETD
Trigger: GTCCGTCTCCCCAGACCCTGGACGCATTTGCCGCAATGGCCTGCACGGAGATGCTGACAAGAAACACCCTGAAGCCCAGTCCCCAGGCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558488.1
CDS CCA 90 bp CCGCACTGGCTGCAGAACTTGGGGGTTTCCTCCTTGGAGACATGCTaGCACGAAGGACACTCCATGGGTCCTGCTGGGACTGCCCTGCAG +
Preference number: 5 (lower is better)
Translates to: PHWLQNLGVSSLETC*HEGHSMGPAGTALQ
Trigger: CTGCAGGGCAGTCCCAGCAGGACCCATGGAGTGTCCTTCGTGCCAGCATGTCTCCAAGGAGGAAACCCCCAAGTTCTGCAGCCAGTGCGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000319921.4
ENST00000508628.6
ENST00000582970.5
CDS CCA 90 bp TGGGGGCTGCAGGAGGCAGCCTCTCTCCGCACTGGCTGCAGAACTTaGGGGTTTCCTCCTTGGAGACATGCTGGCACGAAGGACACTCCA +
Preference number: 5 (lower is better)
Translates to: WGLQEAASLRTGCRT*GFPPWRHAGTKDTP
Trigger: TGGAGTGTCCTTCGTGCCAGCATGTCTCCAAGGAGGAAACCCCCAAGTTCTGCAGCCAGTGCGGAGAGAGGCTGCCTCCTGCAGCCCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000319921.4
ENST00000508628.6
ENST00000582970.5
CDS CCA 90 bp CCCTTGCCCCTTTCCTCACTTCTGCTAGAGAGCTGGTGCTGCTCTTaGAGAAGCCTGCGCAGGACGAGGTGGACCACGCCGATGGTCTCG +
Preference number: 5 (lower is better)
Translates to: PLPLSSLLLESWCCS*RSLRRTRWTTPMVS
Trigger: CGAGACCATCGGCGTGGTCCACCTCGTCCTGCGCAGGCTTCTCCAAGAGCAGCACCAGCTCTCTAGCAGAAGTGAGGAAAGGGGCAAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411702.7
ENST00000558116.5
CDS CCA 90 bp AGGGACAGAGCCTGCAGCCCCTTGCACCGGGCCTCGCTGATGTCCTaGAGCAGCTTTTTGGCCTGGATGAGCTCCTGGTTGATCTGGTCC +
Preference number: 5 (lower is better)
Translates to: RDRACSPLHRASLMS*SSFLAWMSSWLIWS
Trigger: GGACCAGATCAACCAGGAGCTCATCCAGGCCAAAAAGCTGCTCCAGGACATCAGCGAGGCCCGGTGCAAGGGGCTGCAGGCTCTGTCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000508628.6
ENST00000559070.5
ENST00000582970.5
CDS CCA 90 bp CGGAAGGTGCTGATGATGCCCTGTGGGGTGGAGTGCGGGCTGCACTaGAAGGACACCAGGTGGACCTGCTTCAGGCTGCGGAAGAGATCT +
Preference number: 5 (lower is better)
Translates to: RKVLMMPCGVECGLH*KDTRWTCFRLRKRS
Trigger: AGATCTCTTCCGCAGCCTGAAGCAGGTCCACCTGGTGTCCTTCCAGTGCAGCCCGCACTCCACCCCACAGGGCATCATCAGCACCTTCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS CCA 90 bp GGGTCAAGGGCCCAGTTGGAGATGCCCACGAAGCCGACCTTTTTGTaGGGGGCGGGATCGTCTTCAATGCATCCGTCTTCCAGCAGCGGG +
Preference number: 5 (lower is better)
Translates to: GSRAQLEMPTKPTFL*GAGSSSMHPSSSSG
Trigger: CCCGCTGCTGGAAGACGGATGCATTGAAGACGATCCCGCCCCCCACAAAAAGGTCGGCTTCGTGGGCATCTCCAACTGGGCCCTTGACCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS CCA 90 bp AGGAGGAGCACCACCCTCCGCATATTGCGCGTGCAGCTCTCGTTCTaGTCTCTGAGCATGCCCACGGCGCTCTGCACACAGCTTCTCAGC +
Preference number: 5 (lower is better)
Translates to: RRSTTLRILRVQLSF*SLSMPTALCTQLLS
Trigger: GCTGAGAAGCTGTGTGCAGAGCGCCGTGGGCATGCTCAGAGACCAGAACGAGAGCTGCACGCGCAATATGCGGAGGGTGGTGCTCCTCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp GGAGAACGGAGCACAGTTCCTTCCGTGCCTCCTGCCGGCGCTGCTCAAGGTGTGGCAGCCATCTCGTCCTaGGTCTTGGTCTCAGCTTCC +
Preference number: 5 (lower is better)
Translates to: GERSTVPSVPPAGAAQGVAAISS*VLVSAS
Trigger: GGAAGCTGAGACCAAGACCAAGGACGAGATGGCTGC...CACACCTTGAGCAGCGCCGGCAGGAGGCACGGAAGGAACTGTGCTCCGTTCTCC
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp CTGGACTTCCCCTGTGGCCGCAAGGCTGTGCTTGTACAGGGGTTAAGTGTCCAAGCAAGCCCGTGTGACTaGTGCCACACGCGCACGGCC +
Preference number: 5 (lower is better)
Translates to: LDFPCGRKAVLVQGLSVQASPCD*CHTRTA
Trigger: GGCCGTGCGCGTGTGGCACAAGTCACACGGGCTTGC...TTGGACACTTAACCCCTGTACAAGCACAGCCTTGCGGCCACAGGGGAAGTCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319921.4
CDS-3UTR CAA 90 bp GGGCAGCCGTGGCCAGCAGGGAGCTTCCTCATGTGGCATTGCCTGCGAGACTGTGCTCTGTCCCCCAGGTaGAAGTGCAGTGGTGTGATC +
Preference number: 5 (lower is better)
Translates to: GQPWPAGSFLMWHCLRDCALSPR*KCSGVI
Trigger: GATCACACCACTGCACTTCAACCTGGGGGACAGAGC...ACAGTCTCGCAGGCAATGCCACATGAGGAAGCTCCCTGCTGGCCACGGCTGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000319921.4
CDS-3UTR CAA 90 bp GGGGTGGGCAGTGCCAGAGGCGAACGGGCACAGGTCATTACTGCGTGTGTGGCTCACTCGAGGACAGCTTaGGCCACAGCATCACGGAGA +
Preference number: 5 (lower is better)
Translates to: GVGSARGERAQVITACVAHSRTA*ATASRR
Trigger: TCTCCGTGATGCTGTGGCCAAAGCTGTCCTCGAGTG...AGCCACACACGCAGTAATGACCTGTGCCCGTTCGCCTCTGGCACTGCCCACCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp GGAGAACGGAGCACAGTTCCTTCCGTGCCTCCTGCCGGCGCTGCTCAAGGTGTGCACTCGAGGACAGCTTaGGCCACAGCATCACGGAGA +
Preference number: 5 (lower is better)
Translates to: GERSTVPSVPPAGAAQGVHSRTA*ATASRR
Trigger: TCTCCGTGATGCTGTGGCCAAAGCTGTCCTCGAGTG...CACACCTTGAGCAGCGCCGGCAGGAGGCACGGAAGGAACTGTGCTCCGTTCTCC
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp GGGGTGGGCAGTGCCAGAGGCGAACGGGCACAGGTCATTACTGCGTGTGTGGCTGAGCAAGGATGGCCGTaGGGACAAGTGTACCAGTGG +
Preference number: 5 (lower is better)
Translates to: GVGSARGERAQVITACVAEQGWP*GQVYQW
Trigger: CCACTGGTACACTTGTCCCAACGGCCATCCTTGCTC...AGCCACACACGCAGTAATGACCTGTGCCCGTTCGCCTCTGGCACTGCCCACCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp AGCTCCGAGTGCAAGTTGAAGACTTCAGCAAGCCAGCCCCCGGCCCCCACACCCTCCCCAAATGGCTCTTaGTGCAGCCGCAGCAGCTGT +
Preference number: 5 (lower is better)
Translates to: SSECKLKTSASQPPAPTPSPNGS*CSRSSC
Trigger: ACAGCTGCTGCGGCTGCACAAAGAGCCATTTGGGGA...GGGTGTGGGGGCCGGGGGCTGGCTTGCTGAAGTCTTCAACTTGCACTCGGAGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp TCAGCAAGCCAGCCCCCGGCCCCCACACCCGTTCATAGGCAGTCGGAATGCAGAGCATCGACACTGCCGTaGATGTTGGGCTGCAGATGG +
Preference number: 5 (lower is better)
Translates to: SASQPPAPTPVHRQSECRASTLP*MLGCRW
Trigger: CCATCTGCAGCCCAACATCAACGGCAGTGTCGATGC...TCTGCATTCCGACTGCCTATGAACGGGTGTGGGGGCCGGGGGCTGGCTTGCTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp GGAGAACGGAGCACAGTTCCTTCCGTGCCTCCTGCCGGCGCTGCTCAAGGTGTGTCTGCCACGATGGTCTaGGCGAGAGACTTGGAGCTG +
Preference number: 5 (lower is better)
Translates to: GERSTVPSVPPAGAAQGVSATMV*ARDLEL
Trigger: CAGCTCCAAGTCTCTCGCCAAGACCATCGTGGCAGA...CACACCTTGAGCAGCGCCGGCAGGAGGCACGGAAGGAACTGTGCTCCGTTCTCC
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp GGAGAACGGAGCACAGTTCCTTCCGTGCCTCCTGCCGGCGCTGCTCAAGGTGTGATGAGCTCTGTCTCGTaGGGGCTGCCACGTGACACA +
Preference number: 5 (lower is better)
Translates to: GERSTVPSVPPAGAAQGVMSSVS*GLPRDT
Trigger: TGTGTCACGTGGCAGCCCCAACGAGACAGAGCTCAT...CACACCTTGAGCAGCGCCGGCAGGAGGCACGGAAGGAACTGTGCTCCGTTCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp CGGGGGCCTGCTACACACTGCTCTGGCCAGGCATTCCACTGGGGCAATTGCCTGACTTCCTCTGAGCACTaGGCCTCGGGCAAATTGGCC +
Preference number: 5 (lower is better)
Translates to: RGPATHCSGQAFHWGNCLTSSEH*ASGKLA
Trigger: GGCCAATTTGCCCGAGGCCAAGTGCTCAGAGGAAGT...CAGGCAATTGCCCCAGTGGAATGCCTGGCCAGAGCAGTGTGTAGCAGGCCCCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR CAA 90 bp GGGGTGGGCAGTGCCAGAGGCGAACGGGCACAGGTCATTACTGCGTGTGTGGCTGGCTTCCCTGTGCGCTaGGGAAACAGCTGGAGAGAA +
Preference number: 5 (lower is better)
Translates to: GVGSARGERAQVITACVAGFPVR*GNSWRE
Trigger: TTCTCTCCAGCTGTTTCCCAAGCGCACAGGGAAGCC...AGCCACACACGCAGTAATGACCTGTGCCCGTTCGCCTCTGGCACTGCCCACCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp AGCTCCGAGTGCAAGTTGAAGACTTCAGCAAGCCAGCCCCCGGCCCCCACACCCGGCTTCCCTGTGCGCTaGGGAAACAGCTGGAGAGAA +
Preference number: 5 (lower is better)
Translates to: SSECKLKTSASQPPAPTPGFPVR*GNSWRE
Trigger: TTCTCTCCAGCTGTTTCCCAAGCGCACAGGGAAGCC...GGGTGTGGGGGCCGGGGGCTGGCTTGCTGAAGTCTTCAACTTGCACTCGGAGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS TCA 90 bp TCTAACACCACCACAGAGACGTACTGCTGCAGGTCCTTCCCCTGCTaGAAGCGGGCGCACTGCCGGAAGGTGCTGATGATGCCCTGTGGG +
Preference number: 5 (lower is better)
Translates to: SNTTTETYCCRSFPC*KRAHCRKVLMMPCG
Trigger: CCCACAGGGCATCATCAGCACCTTCCGGCAGTGCGCCCGCTTTCAGCAGGGGAAGGACCTGCAGCAGTACGTCTCTGTGGTGGTGTTAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS GCA 90 bp TCAACTGCCATAGAGGCTGAGGCCCCTGCCTGTTGCTCGGTGGTCTaGAGTTCTGTCCCGGGCTCAGAGCTGCCTCCTTTTGACTCAGGC +
Preference number: 5 (lower is better)
Translates to: STAIEAEAPACCSVV*SSVPGSELPPFDSG
Trigger: GCCTGAGTCAAAAGGAGGCAGCTCTGAGCCCGGGACAGAACTGCAGACCACCGAGCAACAGGCAGGGGCCTCAGCCTCTATGGCAGTTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319921.4
ENST00000508628.6
ENST00000559070.5
ENST00000582970.5
CDS GCA 90 bp TGCAGGATGCTGAAGGTGCTGTCCAGCATGAGCGCAGCGGCAATCTaGTTCCCCTTCACCAGGTCCTTCCTCGGCCCGTCTGTGATGTGG +
Preference number: 5 (lower is better)
Translates to: CRMLKVLSSMSAAAI*FPFTRSFLGPSVMW
Trigger: CCACATCACAGACGGGCCGAGGAAGGACCTGGTGAAGGGGAAGCAGATTGCCGCTGCGCTCATGCTGGACAGCACCTTCAGCATCCTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319921.4
ENST00000508628.6
ENST00000559070.5
ENST00000582970.5
CDS GCA 90 bp GCTCTGACTTCCCTGATGACAGCCTGGGCCAGGCTCCCGCTGCCTTaGATGTGCTCATCGGAGCAGATGAGCTCCAGCGGCATGGAAAGA +
Preference number: 5 (lower is better)
Translates to: ALTSLMTAWARLPLP*MCSSEQMSSSGMER
Trigger: TCTTTCCATGCCGCTGGAGCTCATCTGCTCCGATGAGCACATGCAAGGCAGCGGGAGCCTGGCCCAGGCTGTCATCAGGGAAGTCAGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000508628.6
ENST00000558116.5
ENST00000558488.1
ENST00000559603.1
ENST00000582970.5
CDS GCA 90 bp ACTGGGCTTCAGGGTGTTTCTTGTCAGCATCTCCGTGCAGGCCATTaGGGCAAATGCGTCCAGGGTCTGGGGAGACGGACAGCAGGGCGT +
Preference number: 5 (lower is better)
Translates to: TGLQGVSCQHLRAGH*GKCVQGLGRRTAGR
Trigger: ACGCCCTGCTGTCCGTCTCCCCAGACCCTGGACGCATTTGCCGCAATGGCCTGCACGGAGATGCTGACAAGAAACACCCTGAAGCCCAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558488.1
CDS CCA 90 bp GCAGCCTCTCTCCGCACTGGCTGCAGAACTTGGGGGTTTCCTCCTTaGAGACATGCTGGCACGAAGGACACTCCATGGGTCCTGCTGGGA +
Preference number: 5 (lower is better)
Translates to: AASLRTGCRTWGFPP*RHAGTKDTPWVLLG
Trigger: TCCCAGCAGGACCCATGGAGTGTCCTTCGTGCCAGCATGTCTCCAAGGAGGAAACCCCCAAGTTCTGCAGCCAGTGCGGAGAGAGGCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000319921.4
ENST00000508628.6
ENST00000582970.5
CDS CCA 90 bp CGGAGAGCCTTGTATTCATCGCCGTACACCAGGTACCTATCCATCTaGCCTGGGTGGTCCTGCCGCAGCCCCTGCTGCTTGACAACGTCC +
Preference number: 5 (lower is better)
Translates to: RRALYSSPYTRYLSI*PGWSCRSPCCLTTS
Trigger: GGACGTTGTCAAGCAGCAGGGGCTGCGGCAGGACCACCCAGGCCAGATGGATAGGTACCTGGTGTACGGCGATGAATACAAGGCTCTCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000411702.7
ENST00000508628.6
ENST00000558116.5
ENST00000573038.1
ENST00000582970.5
CDS CCA 90 bp TTCCAGCAACAGCACAGACAGAGCTCAGACTGGCTGTGTGTGGGGTaGCCCACAAGACAGCGAGCCTGCTTGCGCTGCCGTTGTGCTGTG +
Preference number: 5 (lower is better)
Translates to: FQQQHRQSSDWLCVG*PTRQRACLRCRCAV
Trigger: CACAGCACAACGGCAGCGCAAGCAGGCTCGCTGTCTTGTGGGCCACCCCACACACAGCCAGTCTGAGCTCTGTCTGTGCTGTTGCTGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411702.7
ENST00000558116.5
CDS-3UTR CAA 90 bp AGCTCCGAGTGCAAGTTGAAGACTTCAGCAAGCCAGCCCCCGGCCCCCACACCCCAGAGCTGCCTCCTTTaGACTCAGGCAACAGGAGCT +
Preference number: 5 (lower is better)
Translates to: SSECKLKTSASQPPAPTPQSCLL*TQATGA
Trigger: AGCTCCTGTTGCCTGAGTCAAAAGGAGGCAGCTCTG...GGGTGTGGGGGCCGGGGGCTGGCTTGCTGAAGTCTTCAACTTGCACTCGGAGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp GGGCAGCCGTGGCCAGCAGGGAGCTTCCTCATGTGGCATTGCCTGCGAGACTGTGCCCCTTTAACTGCATaGGCTGGCTCAGCTACAGCA +
Preference number: 5 (lower is better)
Translates to: GQPWPAGSFLMWHCLRDCAPLTA*AGSATA
Trigger: TGCTGTAGCTGAGCCAGCCAATGCAGTTAAAGGGGC...ACAGTCTCGCAGGCAATGCCACATGAGGAAGCTCCCTGCTGGCCACGGCTGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319921.4
CDS-3UTR CAA 90 bp GGGCAGCCGTGGCCAGCAGGGAGCTTCCTCATGTGGCATTGCCTGCGAGACTGTCTGCGTATTCAAGACTaGCTCAAGTCCCGGAAGCCG +
Preference number: 5 (lower is better)
Translates to: GQPWPAGSFLMWHCLRDCLRIQD*LKSRKP
Trigger: CGGCTTCCGGGACTTGAGCAAGTCTTGAATACGCAG...ACAGTCTCGCAGGCAATGCCACATGAGGAAGCTCCCTGCTGGCCACGGCTGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319921.4
CDS-3UTR CAA 90 bp TCCTGTTCCAGCCACTGGTTCACGCACACTAGCCAGGTGCGCCCTGGAGGCTGTCACTCGAGGACAGCTTaGGCCACAGCATCACGGAGA +
Preference number: 5 (lower is better)
Translates to: SCSSHWFTHTSQVRPGGCHSRTA*ATASRR
Trigger: TCTCCGTGATGCTGTGGCCAAAGCTGTCCTCGAGTG...ACAGCCTCCAGGGCGCACCTGGCTAGTGTGCGTGAACCAGTGGCTGGAACAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573038.1
CDS-3UTR CAA 90 bp CACGCCGCAGACGAGGAGAGAGGAGTCTTCTCTCCAAAGTCATCCAAAGATAGCTCTCTCCGCTGCGGGTaGCCCAGCACGTGGCCGGTC +
Preference number: 5 (lower is better)
Translates to: HAADEERGVFSPKSSKDSSLRCG*PSTWPV
Trigger: GACCGGCCACGTGCTGGGCAACCCGCAGCGGAGAGA...GCTATCTTTGGATGACTTTGGAGAGAAGACTCCTCTCTCCTCGTCTGCGGCGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp TCAGCAAGCCAGCCCCCGGCCCCCACACCCGTTCATAGGCAGTCGGAATGCAGAGCTGCAGAAAGCCTTTaGGATCCCTCACTGGAGGCT +
Preference number: 5 (lower is better)
Translates to: SASQPPAPTPVHRQSECRAAESL*DPSLEA
Trigger: AGCCTCCAGTGAGGGATCCAAAAGGCTTTCTGCAGC...TCTGCATTCCGACTGCCTATGAACGGGTGTGGGGGCCGGGGGCTGGCTTGCTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp TCAGCAAGCCAGCCCCCGGCCCCCACACCCGTTCATAGGCAGTCGGAATGCAGACACATAGATGCCTCTTaGGTTGATGGCCGTGGCCAG +
Preference number: 5 (lower is better)
Translates to: SASQPPAPTPVHRQSECRHIDAS*VDGRGQ
Trigger: CTGGCCACGGCCATCAACCAAAGAGGCATCTATGTG...TCTGCATTCCGACTGCCTATGAACGGGTGTGGGGGCCGGGGGCTGGCTTGCTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp GGAGAACGGAGCACAGTTCCTTCCGTGCCTCCTGCCGGCGCTGCTCAAGGTGTGTTGCTGGCTGTCTCCTaGCATTCACAGAGAGTGCGC +
Preference number: 5 (lower is better)
Translates to: GERSTVPSVPPAGAAQGVLLAVS*HSQRVR
Trigger: GCGCACTCTCTGTGAATGCAAGGAGACAGCCAGCAA...CACACCTTGAGCAGCGCCGGCAGGAGGCACGGAAGGAACTGTGCTCCGTTCTCC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS TCA 90 bp ATCAGAGCCTGGGAACTCTGGGACGCTCCCAGAAGCAGAGCCAAGTaGGTGAGTAGCCGGATAAGGAGGAAGACCACTGGGGGCAGCCCT +
Preference number: 5 (lower is better)
Translates to: IRAWELWDAPRSRAK*VSSRIRRKTTGGSP
Trigger: AGGGCTGCCCCCAGTGGTCTTCCTCCTTATCCGGCTACTCACTCACTTGGCTCTGCTTCTGGGAGCGTCCCAGAGTTCCCAGGCTCTGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000411702.7
ENST00000508628.6
ENST00000558116.5
ENST00000582970.5
CDS TCA 90 bp GCGCAGTTCAGCAGGATCGATTTGGCCTCCTCAGACACCTTCTGGTaGAGTTCCTCCGTCAAGGCCCGGGGACCCTGCCTCTCTATGACC +
Preference number: 5 (lower is better)
Translates to: AQFSRIDLASSDTFW*SSSVKARGPCLSMT
Trigger: GGTCATAGAGAGGCAGGGTCCCCGGGCCTTGACGGAGGAACTTCACCAGAAGGTGTCTGAGGAGGCCAAATCGATCCTGCTGAACTGCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS GCA 90 bp CTGCCTGTTGCTCGGTGGTCTGCAGTTCTGTCCCGGGCTCAGAGCTaGCTCCTTTTGACTCAGGCAACAGGAGCTCCTGGGCAGCATCTT +
Preference number: 5 (lower is better)
Translates to: LPVARWSAVLSRAQS*LLLTQATGAPGQHL
Trigger: AAGATGCTGCCCAGGAGCTCCTGTTGCCTGAGTCAAAAGGAGGCAGCTCTGAGCCCGGGACAGAACTGCAGACCACCGAGCAACAGGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319921.4
ENST00000508628.6
ENST00000559070.5
ENST00000582970.5
CDS GCA 90 bp GTGAGCCTCCATTCCATGTCTCCCAGCAACGACTCCTTCCAGCCATaGTCCGCGGGGAATTGGATTTCCACCAGCCGCCTCCAGACCTCA +
Preference number: 5 (lower is better)
Translates to: VSLHSMSPSNDSFQP*SAGNWISTSRLQTS
Trigger: TGAGGTCTGGAGGCGGCTGGTGGAAATCCAATTCCCCGCGGAGCATGGCTGGAAGGAGTCGTTGCTGGGAGACATGGAATGGAGGCTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319921.4
ENST00000508628.6
ENST00000559070.5
ENST00000582970.5
CDS GCA 90 bp CCCGAGGTTTGTGGTCAATGCCTCCAATCGGCGCATGGCAGTCAATaGAGATGCTCTGTTCCATCGGCCTGCCACACTCTCCCACGGAGC +
Preference number: 5 (lower is better)
Translates to: PEVCGQCLQSAHGSQ*RCSVPSACHTLPRS
Trigger: GCTCCGTGGGAGAGTGTGGCAGGCCGATGGAACAGAGCATCTGCATTGACTGCCATGCGCCGATTGGAGGCATTGACCACAAACCTCGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000411702.7
ENST00000508628.6
ENST00000558116.5
ENST00000574909.1
ENST00000582970.5
CDS GCA 90 bp CTGCTCACAGTCTGCAGAAGGCACGCTGGCGGCCTCAAGCGGGGCTaGATCCTGCTTCCTTCTCTTGCTGGGTATGGCATTAGCAGCTTC +
Preference number: 5 (lower is better)
Translates to: LLTVCRRHAGGLKRG*ILLPSLAGYGISSF
Trigger: GAAGCTGCTAATGCCATACCCAGCAAGAGAAGGAAGCAGGATGCAGCCCCGCTTGAGGCCGCCAGCGTGCCTTCTGCAGACTGTGAGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508628.6
CDS GCA 90 bp AGCTCAGGCAAGTCTCCGGGCGCGAACAGCTGGCTGATGGTGACATaGTGCAGCCTGGTCACATCAGAAACCATGAGGGTGGATCTCCGG +
Preference number: 5 (lower is better)
Translates to: SSGKSPGANSWLMVT*CSLVTSETMRVDLR
Trigger: CCGGAGATCCACCCTCATGGTTTCTGATGTGACCAGGCTGCAGCATGTCACCATCAGCCAGCTGTTCGCGCCCGGAGACTTGCCTGAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS GCA 90 bp AGCGGTGCCCCTCCCACCGGCCCACCAGAGGCCCCGGCTGTTAGCTaGATGTATACTTGTGTCCCAGGCTTGCGACCTAAACTTTCATTG +
Preference number: 5 (lower is better)
Translates to: SGAPPTGPPEAPAVS*MYTCVPGLRPKLSL
Trigger: CAATGAAAGTTTAGGTCGCAAGCCTGGGACACAAGTATACATGCAGCTAACAGCCGGGGCCTCTGGTGGGCCGGTGGGAGGGGCACCGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558488.1
CDS GCA 90 bp GGTCAATGCAGAGCAAAGAGGACCTCACTGCCCAGGCAAAGTCTGTaGTCTCCAGAGAGACGCGTCCAGTACCGCGGGATTGGCACCTGC +
Preference number: 5 (lower is better)
Translates to: GQCRAKRTSLPRQSL*SPERRVQYRGIGTC
Trigger: GCAGGTGCCAATCCCGCGGTACTGGACGCGTCTCTCTGGAGAGCACAGACTTTGCCTGGGCAGTGAGGTCCTCTTTGCTCTGCATTGACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573548.1
CDS CCA 90 bp TGGGGGTTTCCTCCTTGGAGACATGCTGGCACGAAGGACACTCCATaGGTCCTGCTGGGACTGCCCTGCAGATCCAGAAGCAAGAGCAGG +
Preference number: 5 (lower is better)
Translates to: WGFPPWRHAGTKDTP*VLLGLPCRSRSKSR
Trigger: CCTGCTCTTGCTTCTGGATCTGCAGGGCAGTCCCAGCAGGACCCATGGAGTGTCCTTCGTGCCAGCATGTCTCCAAGGAGGAAACCCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000319921.4
ENST00000508628.6
ENST00000582970.5
CDS CCA 90 bp TCGATGAATGATATCATGCTCGCCAGCAGAGGGGTGACAGCACCTTaGACCCGCTTCCAGAGGGTGTGCCTGAATGTGCCCGCCTCCTGG +
Preference number: 5 (lower is better)
Translates to: SMNDIMLASRGVTAP*TRFQRVCLNVPASW
Trigger: CCAGGAGGCGGGCACATTCAGGCACACCCTCTGGAAGCGGGTCCAAGGTGCTGTCACCCCTCTGCTGGCGAGCATGATATCATTCATCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000508628.6
ENST00000558116.5
ENST00000560694.1
ENST00000582970.5
CDS-3UTR CAA 90 bp TCAGCAAGCCAGCCCCCGGCCCCCACACCCGTTCATAGGCAGTCGGAATGCAGAATGAACAGACAGCGGTaGACGTACTCGCCCTTCTTC +
Preference number: 5 (lower is better)
Translates to: SASQPPAPTPVHRQSECRMNRQR*TYSPFF
Trigger: GAAGAAGGGCGAGTACGTCAACCGCTGTCTGTTCAT...TCTGCATTCCGACTGCCTATGAACGGGTGTGGGGGCCGGGGGCTGGCTTGCTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp GGGCAGCCGTGGCCAGCAGGGAGCTTCCTCATGTGGCATTGCCTGCGAGACTGTAAGAAGCTGTTCAGGTaGATGGTGTCCCAGGTCTGC +
Preference number: 5 (lower is better)
Translates to: GQPWPAGSFLMWHCLRDCKKLFR*MVSQVC
Trigger: GCAGACCTGGGACACCATCAACCTGAACAGCTTCTT...ACAGTCTCGCAGGCAATGCCACATGAGGAAGCTCCCTGCTGGCCACGGCTGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319921.4
CDS-3UTR CAA 90 bp ATCAAGTCCACGCCGCAGACGAGGAGAGAGGAGTCTTCTCTCCAAAGTCATCCATGTCTCCAGGCATCCTaGTGCCGCGGGGCCAGCTCC +
Preference number: 5 (lower is better)
Translates to: IKSTPQTRREESSLQSHPCLQAS*CRGASS
Trigger: GGAGCTGGCCCCGCGGCACAAGGATGCCTGGAGACA...TGGATGACTTTGGAGAGAAGACTCCTCTCTCCTCGTCTGCGGCGTGGACTTGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp GGAGAACGGAGCACAGTTCCTTCCGTGCCTCCTGCCGGCGCTGCTCAAGGTGTGAGCTCCGAGTGCAAGTaGAAGACTTCAGCAAGCCAG +
Preference number: 5 (lower is better)
Translates to: GERSTVPSVPPAGAAQGVSSECK*KTSASQ
Trigger: CTGGCTTGCTGAAGTCTTCAACTTGCACTCGGAGCT...CACACCTTGAGCAGCGCCGGCAGGAGGCACGGAAGGAACTGTGCTCCGTTCTCC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp TCAGCAAGCCAGCCCCCGGCCCCCACACCCGTTCATAGGCAGTCGGAATGCAGAAGCTCCGAGTGCAAGTaGAAGACTTCAGCAAGCCAG +
Preference number: 5 (lower is better)
Translates to: SASQPPAPTPVHRQSECRSSECK*KTSASQ
Trigger: CTGGCTTGCTGAAGTCTTCAACTTGCACTCGGAGCT...TCTGCATTCCGACTGCCTATGAACGGGTGTGGGGGCCGGGGGCTGGCTTGCTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp TTTCAGGCAGGGCATGGGGGACTCCTTCTGAGGCAGAGGTGTAAGCGTTTCAGTACCTGCCAGGTAGGCTaGGATGGCCTCGAGGGGTGC +
Preference number: 5 (lower is better)
Translates to: FQAGHGGLLLRQRCKRFSTCQVG*DGLEGC
Trigger: GCACCCCTCGAGGCCATCCAAGCCTACCTGGCAGGT...ACTGAAACGCTTACACCTCTGCCTCAGAAGGAGTCCCCCATGCCCTGCCTGAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR CAA 90 bp GGAGAACGGAGCACAGTTCCTTCCGTGCCTCCTGCCGGCGCTGCTCAAGGTGTGGTTCCTCCGTGCACCTaGACCAGCTTTATGGTGTCA +
Preference number: 5 (lower is better)
Translates to: GERSTVPSVPPAGAAQGVVPPCT*TSFMVS
Trigger: TGACACCATAAAGCTGGTCAAGGTGCACGGAGGAAC...CACACCTTGAGCAGCGCCGGCAGGAGGCACGGAAGGAACTGTGCTCCGTTCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp TCAGCAAGCCAGCCCCCGGCCCCCACACCCGTTCATAGGCAGTCGGAATGCAGAGTTCCTCCGTGCACCTaGACCAGCTTTATGGTGTCA +
Preference number: 5 (lower is better)
Translates to: SASQPPAPTPVHRQSECRVPPCT*TSFMVS
Trigger: TGACACCATAAAGCTGGTCAAGGTGCACGGAGGAAC...TCTGCATTCCGACTGCCTATGAACGGGTGTGGGGGCCGGGGGCTGGCTTGCTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp TCAGCAAGCCAGCCCCCGGCCCCCACACCCGTTCATAGGCAGTCGGAATGCAGATTGCTGACGCTGGACTaGGAGAGAAAGGCATTCAGC +
Preference number: 5 (lower is better)
Translates to: SASQPPAPTPVHRQSECRLLTLD*ERKAFS
Trigger: GCTGAATGCCTTTCTCTCCAAGTCCAGCGTCAGCAA...TCTGCATTCCGACTGCCTATGAACGGGTGTGGGGGCCGGGGGCTGGCTTGCTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp GGAGAACGGAGCACAGTTCCTTCCGTGCCTCCTGCCGGCGCTGCTCAAGGTGTGACATCCAAAGATCTCTaGCCCAGGGCGGAGTATCTG +
Preference number: 5 (lower is better)
Translates to: GERSTVPSVPPAGAAQGVTSKDL*PRAEYL
Trigger: CAGATACTCCGCCCTGGGCAAGAGATCTTTGGATGT...CACACCTTGAGCAGCGCCGGCAGGAGGCACGGAAGGAACTGTGCTCCGTTCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp GGGGTGGGCAGTGCCAGAGGCGAACGGGCACAGGTCATTACTGCGTGTGTGGCTACATCCAAAGATCTCTaGCCCAGGGCGGAGTATCTG +
Preference number: 5 (lower is better)
Translates to: GVGSARGERAQVITACVATSKDL*PRAEYL
Trigger: CAGATACTCCGCCCTGGGCAAGAGATCTTTGGATGT...AGCCACACACGCAGTAATGACCTGTGCCCGTTCGCCTCTGGCACTGCCCACCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp GGGGTGGGCAGTGCCAGAGGCGAACGGGCACAGGTCATTACTGCGTGTGTGGCTCAGCTGAAAGGGACGTaGTTGGAAGCGTTCTCGGAA +
Preference number: 5 (lower is better)
Translates to: GVGSARGERAQVITACVAQLKGT*LEAFSE
Trigger: TTCCGAGAACGCTTCCAACAACGTCCCTTTCAGCTG...AGCCACACACGCAGTAATGACCTGTGCCCGTTCGCCTCTGGCACTGCCCACCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp TCAGCAAGCCAGCCCCCGGCCCCCACACCCGTTCATAGGCAGTCGGAATGCAGAATGTCCACGAACTTCTaGGGCAGTCCTTCTGCGTCT +
Preference number: 5 (lower is better)
Translates to: SASQPPAPTPVHRQSECRMSTNF*GSPSAS
Trigger: AGACGCAGAAGGACTGCCCAAGAAGTTCGTGGACAT...TCTGCATTCCGACTGCCTATGAACGGGTGTGGGGGCCGGGGGCTGGCTTGCTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp GCACCAGTCCATGATCAAGTCCACGCCGCAGACGAGGAGAGAGGAGTCTTCTCTCAGGCTCCCGCTGCCTaGCATGTGCTCATCGGAGCA +
Preference number: 5 (lower is better)
Translates to: APVHDQVHAADEERGVFSQAPAA*HVLIGA
Trigger: TGCTCCGATGAGCACATGCAAGGCAGCGGGAGCCTG...AGAGAAGACTCCTCTCTCCTCGTCTGCGGCGTGGACTTGATCATGGACTGGTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp GGGGTGGGCAGTGCCAGAGGCGAACGGGCACAGGTCATTACTGCGTGTGTGGCTTTCTCAGGCGGAGCGTaGTCCTTGAAGCAAATGGTG +
Preference number: 5 (lower is better)
Translates to: GVGSARGERAQVITACVAFSGGA*SLKQMV
Trigger: CACCATTTGCTTCAAGGACAACGCTCCGCCTGAGAA...AGCCACACACGCAGTAATGACCTGTGCCCGTTCGCCTCTGGCACTGCCCACCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp GGAGAACGGAGCACAGTTCCTTCCGTGCCTCCTGCCGGCGCTGCTCAAGGTGTGTTCTCAGGCGGAGCGTaGTCCTTGAAGCAAATGGTG +
Preference number: 5 (lower is better)
Translates to: GERSTVPSVPPAGAAQGVFSGGA*SLKQMV
Trigger: CACCATTTGCTTCAAGGACAACGCTCCGCCTGAGAA...CACACCTTGAGCAGCGCCGGCAGGAGGCACGGAAGGAACTGTGCTCCGTTCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS TCA 90 bp GCAGGAGTCGCTGGCAGCCTGCTATATACTACATGTCCTGTCACGTaGCCACGGCTTCAGTTTCATTTTCTGCGGCCCCCGAGCTCGCCG +
Preference number: 5 (lower is better)
Translates to: AGVAGSLLYTTCPVT*PRLQFHFLRPPSSP
Trigger: CGGCGAGCTCGGGGGCCGCAGAAAATGAAACTGAAGCCGTGGTCACGTGACAGGACATGTAGTATATAGCAGGCTGCCAGCGACTCCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000319921.4
ENST00000508628.6
ENST00000582970.5
CDS TCA 90 bp GGTACACCCGGTGCCAGTCGTTCTCCACCCGGATACAGAACTGCTTaGCTTGCTGCAGGTAGCACTGCTTCTCCTTGGCCATCTCTGGGC +
Preference number: 5 (lower is better)
Translates to: GTPGASRSPPGYRTA*LAAGSTASPWPSLG
Trigger: GCCCAGAGATGGCCAAGGAGAAGCAGTGCTACCTGCAGCAAGTCAAGCAGTTCTGTATCCGGGTGGAGAACGACTGGCACCGGGTGTACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411702.7
ENST00000508628.6
ENST00000558116.5
ENST00000582970.5
CDS TCA 90 bp CCTGGACGAGGATGTCTGAGGAGCAGATGCCCTTGGCGCTCTCTATaGGCTCTGTCTCGTTGGGGCTGCCACGTGACACAAAAATGCCCC +
Preference number: 5 (lower is better)
Translates to: PGRGCLRSRCPWRSL*ALSRWGCHVTQKCP
Trigger: GGGGCATTTTTGTGTCACGTGGCAGCCCCAACGAGACAGAGCTCATAGAGAGCGCCAAGGGCATCTGCTCCTCAGACATCCTCGTCCAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS GCA 90 bp TTCCTCCTTGGAGACATGCTGGCACGAAGGACACTCCATGGGTCCTaGTGGGACTGCCCTGCAGATCCAGAAGCAAGAGCAGGAGTCGCT +
Preference number: 5 (lower is better)
Translates to: FLLGDMLARRTLHGS*WDCPADPEARAGVA
Trigger: AGCGACTCCTGCTCTTGCTTCTGGATCTGCAGGGCAGTCCCAGCAGGACCCATGGAGTGTCCTTCGTGCCAGCATGTCTCCAAGGAGGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319921.4
ENST00000508628.6
ENST00000582970.5
CDS GCA 90 bp ATGGAGGGAACAGAGCAGCTCCTTCCAGCCTCTGGGCAAGCAGAGTaGTTCCTTTTTCCAGCCCCAGGCATCGCCTTCCCTAGACACGGT +
Preference number: 5 (lower is better)
Translates to: MEGTEQLLPASGQAE*FLFPAPGIAFPRHG
Trigger: ACCGTGTCTAGGGAAGGCGATGCCTGGGGCTGGAAAAAGGAAGCACTCTGCTTGCCCAGAGGCTGGAAGGAGCTGCTCTGTTCCCTCCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000411702.7
ENST00000558116.5
CDS GCA 90 bp CAGTCTGCAGAAGGCACGCTGGCGGCCTCAAGCGGGGCTGCATCCTaGTTCCTTCTCTTGCTGGGTATGGCATTAGCAGCTTCCCATTCA +
Preference number: 5 (lower is better)
Translates to: QSAEGTLAASSGAAS*FLLLLGMALAASHS
Trigger: TGAATGGGAAGCTGCTAATGCCATACCCAGCAAGAGAAGGAAGCAGGATGCAGCCCCGCTTGAGGCCGCCAGCGTGCCTTCTGCAGACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508628.6
CDS GCA 90 bp TCTCGTGACTCCTCGTGGCTGCCAGGGCTCTCAGGAAGGATCAAGTaGAGAACCGTGTCTGGGGAAATCTTTTGGCCACCTTTGGGCGCC +
Preference number: 5 (lower is better)
Translates to: SRDSSWLPGLSGRIK*RTVSGEIFWPPLGA
Trigger: GGCGCCCAAAGGTGGCCAAAAGATTTCCCCAGACACGGTTCTGCACTTGATCCTTCCTGAGAGCCCTGGCAGCCACGAGGAGTCACGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000508628.6
ENST00000571908.1
ENST00000582970.5
CDS GCA 90 bp GTGCTGCTGCGTGCACAGATTGTGGAAAAGCTCCTCCGCTTGGCGTaGCACCTCGTAGCTCAGCTGATCTGCGAACAGCAGGCTGTAGAC +
Preference number: 5 (lower is better)
Translates to: VLLRAQIVEKLLRLA*HLVAQLICEQQAVD
Trigger: GTCTACAGCCTGCTGTTCGCAGATCAGCTGAGCTACGAGGTGGCACGCCAAGCGGAGGAGCTTTTCCACAATCTGTGCACGCAGCAGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS GCA 90 bp ACGCCTGGGGACTGGGCTTCAGGGTGTTTCTTGTCAGCATCTCCGTaGAGGCCATTGCGGCAAATGCGTCCAGGGTCATCTCACATCCAG +
Preference number: 5 (lower is better)
Translates to: TPGDWASGCFLSASP*RPLRQMRPGSSHIQ
Trigger: CTGGATGTGAGATGACCCTGGACGCATTTGCCGCAATGGCCTGCACGGAGATGCTGACAAGAAACACCCTGAAGCCCAGTCCCCAGGCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000508628.6
ENST00000558116.5
ENST00000582970.5
CDS GCA 90 bp ACTTCCCTGATGACAGCCTGGGCCAGGCTCCCGCTGCCTTGCATGTaGTCATCGGAGCAGATGAGCTCCAGCGGCATGGAAAGATTCTTC +
Preference number: 5 (lower is better)
Translates to: TSLMTAWARLPLPCM*SSEQMSSSGMERFF
Trigger: GAAGAATCTTTCCATGCCGCTGGAGCTCATCTGCTCCGATGAGCACATGCAAGGCAGCGGGAGCCTGGCCCAGGCTGTCATCAGGGAAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000508628.6
ENST00000558116.5
ENST00000558488.1
ENST00000559603.1
ENST00000582970.5
CDS GCA 90 bp GGGTCACTCCAAAGGCCAGGTAATCCCTTGTCTAGTAAGAAGACGTaGTCGGTCACCAGCCCCTGTAACTCGGGGACGCGGCTCTCGGTT +
Preference number: 5 (lower is better)
Translates to: GSLQRPGNPLSSKKT*SVTSPCNSGTRLSV
Trigger: AACCGAGAGCCGCGTCCCCGAGTTACAGGGGCTGGTGACCGAGCACGTCTTCTTACTAGACAAGGGATTACCTGGCCTTTGGAGTGACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559603.1
CDS GCA 90 bp ACCGCGGGATTGGCACCTGCACTCCGGAGGGGTGAGCAGACAGCCTaGTGCCACGACTTACCTCCTGAGCCCAGAAGTGAAGATTTTATG +
Preference number: 5 (lower is better)
Translates to: TAGLAPALRRGEQTA*CHDLPPEPRSEDFM
Trigger: CATAAAATCTTCACTTCTGGGCTCAGGAGGTAAGTCGTGGCAGCAGGCTGTCTGCTCACCCCTCCGGAGTGCAGGTGCCAATCCCGCGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000573548.1
CDS CCA 90 bp TTAGCGGAGGAGCTGAGACCCAGCGGGTGCTTCATAGCCCTTAGCTaGGTCATGGCAGAACACAGCTGTGAGCCCGAATCCGTTTCCCAG +
Preference number: 5 (lower is better)
Translates to: LAEELRPSGCFIALS*VMAEHSCEPESVSQ
Trigger: CTGGGAAACGGATTCGGGCTCACAGCTGTGTTCTGCCATGACCCAGCTAAGGGCTATGAAGCACCCGCTGGGTCTCAGCTCCTCCGCTAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319921.4
CDS CCA 90 bp CCCTTGCACCGGGCCTCGCTGATGTCCTGGAGCAGCTTTTTGGCCTaGATGAGCTCCTGGTTGATCTGGTCCAGTGTTTCACGGCGAAAG +
Preference number: 5 (lower is better)
Translates to: PLHRASLMSWSSFLA*MSSWLIWSSVSRRK
Trigger: CTTTCGCCGTGAAACACTGGACCAGATCAACCAGGAGCTCATCCAGGCCAAAAAGCTGCTCCAGGACATCAGCGAGGCCCGGTGCAAGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000508628.6
ENST00000559070.5
ENST00000582970.5
CDS CCA 90 bp GAAGCCACGGGCCCATCCTACCTTCAGAGCAGTCTTAATGCCCAGTaGCTTGCACTCGAGGACAGCTTTGGCCACAGCATCACGGAGAGC +
Preference number: 5 (lower is better)
Translates to: EATGPSYLQSSLNAQ*LALEDSFGHSITES
Trigger: GCTCTCCGTGATGCTGTGGCCAAAGCTGTCCTCGAGTGCAAGCCACTGGGCATTAAGACTGCTCTGAAGGTAGGATGGGCCCGTGGCTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573038.1
CDS-3UTR CAA 90 bp CAGATCTCGGTGGCAGGTGGCTCTGCACAGTCCAGAGTGATAAAACAATCACAGGCCACTCTGCTGGGCTaGGCTGTGGGGCAGGGCTGT +
Preference number: 5 (lower is better)
Translates to: QISVAGGSAQSRVIKQSQATLLG*AVGQGC
Trigger: ACAGCCCTGCCCCACAGCCAAGCCCAGCAGAGTGGC...CTGTGATTGTTTTATCACTCTGGACTGTGCAGAGCCACCTGCCACCGAGATCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp ATTGTTTATGCCTGCAGAGGGGAGTGGGTGACTAGAGGGGAGGAGGATGATGGCCGTGTGGTCCTGGAATaGCGGGCTGCTCTGAGCCTC +
Preference number: 5 (lower is better)
Translates to: IVYACRGEWVTRGEEDDGRVVLE*RAALSL
Trigger: GAGGCTCAGAGCAGCCCGCAATTCCAGGACCACACG...GCCATCATCCTCCTCCCCTCTAGTCACCCACTCCCCTCTGCAGGCATAAACAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319921.4
CDS-3UTR CAA 90 bp CTGGACTTCCCCTGTGGCCGCAAGGCTGTGCTTGTACAGGGGTTAAGTGTCCAACCGGGCTCAGCGTGCTaGCCTTCACTTCCTGGACAT +
Preference number: 5 (lower is better)
Translates to: LDFPCGRKAVLVQGLSVQPGSAC*PSLPGH
Trigger: ATGTCCAGGAAGTGAAGGCAAGCACGCTGAGCCCGG...TTGGACACTTAACCCCTGTACAAGCACAGCCTTGCGGCCACAGGGGAAGTCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319921.4
CDS-3UTR CAA 90 bp TCAGCTCCACTGTGGAGTCGCCAGGATGCTGTCATTTTGTCCAGAGGAAAAGTCTGTCTCCAGGCATCCTaGTGCCGCGGGGCCAGCTCC +
Preference number: 5 (lower is better)
Translates to: SAPLWSRQDAVILSRGKVCLQAS*CRGASS
Trigger: GGAGCTGGCCCCGCGGCACAAGGATGCCTGGAGACA...GACTTTTCCTCTGGACAAAATGACAGCATCCTGGCGACTCCACAGTGGAGCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR CAA 90 bp AGCTCCGAGTGCAAGTTGAAGACTTCAGCAAGCCAGCCCCCGGCCCCCACACCCCATTTCTCGAAGGTCTaGGCCACACTGTCCTCTAAG +
Preference number: 5 (lower is better)
Translates to: SSECKLKTSASQPPAPTPHFSKV*ATLSSK
Trigger: CTTAGAGGACAGTGTGGCCAAGACCTTCGAGAAATG...GGGTGTGGGGGCCGGGGGCTGGCTTGCTGAAGTCTTCAACTTGCACTCGGAGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp ATTGTTTATGCCTGCAGAGGGGAGTGGGTGACTAGAGGGGAGGAGGATGATGGCTGGCTCACTGCTGCCTaGACCTTCTGGGCCCAAGGG +
Preference number: 5 (lower is better)
Translates to: IVYACRGEWVTRGEEDDGWLTAA*TFWAQG
Trigger: CCCTTGGGCCCAGAAGGTCAAGGCAGCAGTGAGCCA...GCCATCATCCTCCTCCCCTCTAGTCACCCACTCCCCTCTGCAGGCATAAACAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319921.4
CDS-3UTR CAA 90 bp TGTCCTGTTCCAGCCACTGGTTCACGCACACTAGCCAGGTGCGCCCTGGAGGCTTTAATGCCCAGTGGCTaGCACTCGAGGACAGCTTTG +
Preference number: 5 (lower is better)
Translates to: CPVPATGSRTLARCALEALMPSG*HSRTAL
Trigger: CAAAGCTGTCCTCGAGTGCAAGCCACTGGGCATTAA...AGCCTCCAGGGCGCACCTGGCTAGTGTGCGTGAACCAGTGGCTGGAACAGGACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573038.1
CDS-3UTR CAA 90 bp TCAGCAAGCCAGCCCCCGGCCCCCACACCCGTTCATAGGCAGTCGGAATGCAGAGGAGCTGTATTCAACTaGCTGGACGTTCTGGAACTG +
Preference number: 5 (lower is better)
Translates to: SASQPPAPTPVHRQSECRGAVFN*LDVLEL
Trigger: CAGTTCCAGAACGTCCAGCAAGTTGAATACAGCTCC...TCTGCATTCCGACTGCCTATGAACGGGTGTGGGGGCCGGGGGCTGGCTTGCTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp TCAGCAAGCCAGCCCCCGGCCCCCACACCCGTTCATAGGCAGTCGGAATGCAGAAATCTGAAGACGTGCTaGACATCTGCCAACGTGAGC +
Preference number: 5 (lower is better)
Translates to: SASQPPAPTPVHRQSECRNLKTC*TSANVS
Trigger: GCTCACGTTGGCAGATGTCAAGCACGTCTTCAGATT...TCTGCATTCCGACTGCCTATGAACGGGTGTGGGGGCCGGGGGCTGGCTTGCTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp AGCTCCGAGTGCAAGTTGAAGACTTCAGCAAGCCAGCCCCCGGCCCCCACACCCAATCTGAAGACGTGCTaGACATCTGCCAACGTGAGC +
Preference number: 5 (lower is better)
Translates to: SSECKLKTSASQPPAPTPNLKTC*TSANVS
Trigger: GCTCACGTTGGCAGATGTCAAGCACGTCTTCAGATT...GGGTGTGGGGGCCGGGGGCTGGCTTGCTGAAGTCTTCAACTTGCACTCGGAGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp AGCTCCGAGTGCAAGTTGAAGACTTCAGCAAGCCAGCCCCCGGCCCCCACACCCTGGATGAGCTCCTGGTaGATCTGGTCCAGTGTTTCA +
Preference number: 5 (lower is better)
Translates to: SSECKLKTSASQPPAPTPWMSSW*IWSSVS
Trigger: TGAAACACTGGACCAGATCAACCAGGAGCTCATCCA...GGGTGTGGGGGCCGGGGGCTGGCTTGCTGAAGTCTTCAACTTGCACTCGGAGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp CACTGGTGGCACCATGACAGTGAGGAGAACGGAGCACAGTTCCTTCCGTGCCTCGTCTGGGGAAATCTTTaGGCCACCTTTGGGCGCCTG +
Preference number: 5 (lower is better)
Translates to: HWWHHDSEENGAQFLPCLVWGNL*ATFGRL
Trigger: CAGGCGCCCAAAGGTGGCCAAAAGATTTCCCCAGAC...GAGGCACGGAAGGAACTGTGCTCCGTTCTCCTCACTGTCATGGTGCCACCAGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp CGGGGGCCTGCTACACACTGCTCTGGCCAGGCATTCCACTGGGGCAATTGCCTGCTCTCCACTTCCGTGTaGTTACGATCCTTCTTGCCA +
Preference number: 5 (lower is better)
Translates to: RGPATHCSGQAFHWGNCLLSTSV*LRSFLP
Trigger: TGGCAAGAAGGATCGTAACAACACGGAAGTGGAGAG...CAGGCAATTGCCCCAGTGGAATGCCTGGCCAGAGCAGTGTGTAGCAGGCCCCCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR CAA 90 bp CACGCCGCAGACGAGGAGAGAGGAGTCTTCTCTCCAAAGTCATCCAAAGATAGCCCACAGACGACGAGGTaGGGCTGGCCGACCTGCAGA +
Preference number: 5 (lower is better)
Translates to: HAADEERGVFSPKSSKDSPQTTR*GWPTCR
Trigger: TCTGCAGGTCGGCCAGCCCAACCTCGTCGTCTGTGG...GCTATCTTTGGATGACTTTGGAGAGAAGACTCCTCTCTCCTCGTCTGCGGCGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp ATCAAGTCCACGCCGCAGACGAGGAGAGAGGAGTCTTCTCTCCAAAGTCATCCAACCTGCCAGGTAGGCTaGGATGGCCTCGAGGGGTGC +
Preference number: 5 (lower is better)
Translates to: IKSTPQTRREESSLQSHPTCQVG*DGLEGC
Trigger: GCACCCCTCGAGGCCATCCAAGCCTACCTGGCAGGT...TGGATGACTTTGGAGAGAAGACTCCTCTCTCCTCGTCTGCGGCGTGGACTTGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp TTTATGCGTGAGAAAACCAAGGCCCTGATGGTGTCCCTGGTCCAAGTCCAGTGCGGGTCAAGGGCCCAGTaGGAGATGCCCACGAAGCCG +
Preference number: 5 (lower is better)
Translates to: FMREKTKALMVSLVQVQCGSRAQ*EMPTKP
Trigger: CGGCTTCGTGGGCATCTCCAACTGGGCCCTTGACCC...GCACTGGACTTGGACCAGGGACACCATCAGGGCCTTGGTTTTCTCACGCATAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp CGGGGGCCTGCTACACACTGCTCTGGCCAGGCATTCCACTGGGGCAATTGCCTGTGTGCATGGCTAGACTaGGGTGGCTTTACCTACTTG +
Preference number: 5 (lower is better)
Translates to: RGPATHCSGQAFHWGNCLCAWLD*GGFTYL
Trigger: CAAGTAGGTAAAGCCACCCAAGTCTAGCCATGCACA...CAGGCAATTGCCCCAGTGGAATGCCTGGCCAGAGCAGTGTGTAGCAGGCCCCCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS TCA 90 bp TTTGGCCACCTTTGGGCGCCTGGATCACATAGATGCCTCTTTGGTTaGTGGCCGTGGCCAGGGTCAGGGATGAGCGTTCCACAGACCCAT +
Preference number: 5 (lower is better)
Translates to: FGHLWAPGSHRCLFG*WPWPGSGMSVPQTH
Trigger: ATGGGTCTGTGGAACGCTCATCCCTGACCCTGGCCACGGCCATCAACCAAAGAGGCATCTATGTGATCCAGGCGCCCAAAGGTGGCCAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000508628.6
ENST00000571908.1
ENST00000582970.5
CDS GCA 90 bp ACGCCGATGGTCTCGTCGGCACTGTGTCCCAGCATCTTGGCCAACTaGTCCAGGTCCTTCAGGATGTGCTGCTGCAGAAAGCCTTTTGGA +
Preference number: 5 (lower is better)
Translates to: TPMVSSALCPSILAN*SRSFRMCCCRKPFG
Trigger: TCCAAAAGGCTTTCTGCAGCAGCACATCCTGAAGGACCTGGAGCAGTTGGCCAAGATGCTGGGACACAGTGCCGACGAGACCATCGGCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411702.7
ENST00000508628.6
ENST00000558116.5
ENST00000582970.5
CDS GCA 90 bp CTTCCCAGCCATTTCTTGGACCTGGGAGCTCAGGTGGTAATGCGTTaGCCTCTGCGAGTTCGAGGAGGTGGACAGTCTCACTGTCACGGT +
Preference number: 5 (lower is better)
Translates to: LPSHFLDLGAQVVMR*PLRVRGGGQSHCHG
Trigger: ACCGTGACAGTGAGACTGTCCACCTCCTCGAACTCGCAGAGGGCAACGCATTACCACCTGAGCTCCCAGGTCCAAGAAATGGCTGGGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000508628.6
ENST00000559070.5
ENST00000582970.5
CDS GCA 90 bp GCTCCTTCACCTCCTCTAAAGAGTACTCTCGTGACTCCTCGTGGCTaGCAGGGCTCTCAGGAAGGATCAAGTGCAGAACCGTGTCTGGGG +
Preference number: 5 (lower is better)
Translates to: APSPPLKSTLVTPRG*QGSQEGSSAEPCLG
Trigger: CCCCAGACACGGTTCTGCACTTGATCCTTCCTGAGAGCCCTGGCAGCCACGAGGAGTCACGAGAGTACTCTTTAGAGGAGGTGAAGGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000508628.6
ENST00000571908.1
ENST00000582970.5
CDS GCA 90 bp GAATGTGCCCGCCTCCTGGAGAGCGTCCTGGTTGCAGGCTTCCCTTaGCAACCACTCCAGAGGGTGAAACTGGCTCTCTTCTTGCTTCTT +
Preference number: 5 (lower is better)
Translates to: ECARLLESVLVAGFP*QPLQRVKLALFLLL
Trigger: AAGAAGCAAGAAGAGAGCCAGTTTCACCCTCTGGAGTGGTTGGCAAGGGAAGCCTGCAACCAGGACGCTCTCCAGGAGGCGGGCACATTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000508628.6
ENST00000558116.5
ENST00000560694.1
ENST00000582970.5
CDS GCA 90 bp GCGGGATTGGCACCTGCACTCCGGAGGGGTGAGCAGACAGCCTGCTaGCACGACTTACCTCCTGAGCCCAGAAGTGAAGATTTTATGAAC +
Preference number: 5 (lower is better)
Translates to: AGLAPALRRGEQTAC*HDLPPEPRSEDFMN
Trigger: GTTCATAAAATCTTCACTTCTGGGCTCAGGAGGTAAGTCGTGGCAGCAGGCTGTCTGCTCACCCCTCCGGAGTGCAGGTGCCAATCCCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000573548.1
CDS CCA 90 bp CTGCTGGGACTGCCCTGCAGATCCAGAAGCAAGAGCAGGAGTCGCTaGCAGCCTGCTATATACTACATGTCCTGTCACGTGACCACGGCT +
Preference number: 5 (lower is better)
Translates to: LLGLPCRSRSKSRSR*QPAIYYMSCHVTTA
Trigger: AGCCGTGGTCACGTGACAGGACATGTAGTATATAGCAGGCTGCCAGCGACTCCTGCTCTTGCTTCTGGATCTGCAGGGCAGTCCCAGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319921.4
ENST00000508628.6
ENST00000582970.5
CDS CCA 90 bp GCTCCTGCCCACACTCCATTTCACCCTCCGAGGCCGACGCCATTGTaGAGTTATTGTTCTCAGAATCTGCTATGGGGGCTGCAGGAGGCA +
Preference number: 5 (lower is better)
Translates to: APAHTPFHPPRPTPL*SYCSQNLLWGLQEA
Trigger: TGCCTCCTGCAGCCCCCATAGCAGATTCTGAGAACAATAACTCCACAATGGCGTCGGCCTCGGAGGGTGAAATGGAGTGTGGGCAGGAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000319921.4
ENST00000508628.6
ENST00000582970.5
CDS CCA 90 bp GTGTTCTCTCATTCTTTCCAGCAACAGCACAGACAGAGCTCAGACTaGCTGTGTGTGGGGTGGCCCACAAGACAGCGAGCCTGCTTGCGC +
Preference number: 5 (lower is better)
Translates to: VFSHSFQQQHRQSSD*LCVGWPTRQRACLR
Trigger: GCGCAAGCAGGCTCGCTGTCTTGTGGGCCACCCCACACACAGCCAGTCTGAGCTCTGTCTGTGCTGTTGCTGGAAAGAATGAGAGAACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411702.7
ENST00000558116.5
CDS CCA 90 bp AGATCGAACTCCTGCACGGTCTCTCTGCCCTCCTCCACCTGGTACTaGCAGTTGGAGAGAATCAGTGGAGTCAGGTCCCGCTCCACTTCA +
Preference number: 5 (lower is better)
Translates to: RSNSCTVSLPSSTWY*QLERISGVRSRSTS
Trigger: TGAAGTGGAGCGGGACCTGACTCCACTGATTCTCTCCAACTGCCAGTACCAGGTGGAGGAGGGCAGAGAGACCGTGCAGGAGTTCGATCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000411702.7
ENST00000427003.7
ENST00000508628.6
ENST00000560083.1
ENST00000582970.5
CDS CCA 90 bp AGGCTGTGTTTGGCTGAGTGGCCACTGTTGCTGGACACCACTGCGTaGCCACAGAGGGGCATCACTGTAGGGTCACAGGTTTCTTTCTGC +
Preference number: 5 (lower is better)
Translates to: RLCLAEWPLLLDTTA*PQRGITVGSQVSFC
Trigger: GCAGAAAGAAACCTGTGACCCTACAGTGATGCCCCTCTGTGGCCACGCAGTGGTGTCCAGCAACAGTGGCCACTCAGCCAAACACAGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559603.1
CDS CCA 90 bp AGGCCGCAGAAACTGTGGGCTCACAGCAAACACCCGGGGCAAGGCTaGAGTAGGCCTAACACGGAGGGAAACACACTGAGAAGGCAGAAA +
Preference number: 5 (lower is better)
Translates to: RPQKLWAHSKHPGQG*SRPNTEGNTLRRQK
Trigger: TTTCTGCCTTCTCAGTGTGTTTCCCTCCGTGTTAGGCCTACTCCAGCCTTGCCCCGGGTGTTTGCTGTGAGCCCACAGTTTCTGCGGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560083.1
ENST00000573919.1
CDS-3UTR CAA 90 bp GGAGAACGGAGCACAGTTCCTTCCGTGCCTCCTGCCGGCGCTGCTCAAGGTGTGTCTGAGGAAGCGGACTaGTTCCCCTTCTTTTTCTTC +
Preference number: 5 (lower is better)
Translates to: GERSTVPSVPPAGAAQGVSEEAD*FPFFFF
Trigger: GAAGAAAAAGAAGGGGAACAAGTCCGCTTCCTCAGA...CACACCTTGAGCAGCGCCGGCAGGAGGCACGGAAGGAACTGTGCTCCGTTCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp CTGGACTTCCCCTGTGGCCGCAAGGCTGTGCTTGTACAGGGGTTAAGTGTCCAAGCAGCCATCTCGTCCTaGGTCTTGGTCTCAGCTTCC +
Preference number: 5 (lower is better)
Translates to: LDFPCGRKAVLVQGLSVQAAISS*VLVSAS
Trigger: GGAAGCTGAGACCAAGACCAAGGACGAGATGGCTGC...TTGGACACTTAACCCCTGTACAAGCACAGCCTTGCGGCCACAGGGGAAGTCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319921.4
CDS-3UTR CAA 90 bp CACTGGTGGCACCATGACAGTGAGGAGAACGGAGCACAGTTCCTTCCGTGCCTCCTGCGTATTCAAGACTaGCTCAAGTCCCGGAAGCCG +
Preference number: 5 (lower is better)
Translates to: HWWHHDSEENGAQFLPCLLRIQD*LKSRKP
Trigger: CGGCTTCCGGGACTTGAGCAAGTCTTGAATACGCAG...GAGGCACGGAAGGAACTGTGCTCCGTTCTCCTCACTGTCATGGTGCCACCAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp ACAGTGATGACAGGGCCATCTGAGGAACGGCCTGCAAGCCCGTGTGACTTGTGCCTTCCTCATGTGGCATaGCCTGCGAGACTGTTCCTG +
Preference number: 5 (lower is better)
Translates to: TVMTGPSEERPASPCDLCLPHVA*PARLFL
Trigger: CAGGAACAGTCTCGCAGGCAATGCCACATGAGGAAG...GCACAAGTCACACGGGCTTGCAGGCCGTTCCTCAGATGGCCCTGTCATCACTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319921.4
CDS-3UTR CAA 90 bp CACTGGTGGCACCATGACAGTGAGGAGAACGGAGCACAGTTCCTTCCGTGCCTCTGCTGCGTGCACAGATaGTGGAAAAGCTCCTCCGCT +
Preference number: 5 (lower is better)
Translates to: HWWHHDSEENGAQFLPCLCCVHR*WKSSSA
Trigger: AGCGGAGGAGCTTTTCCACAATCTGTGCACGCAGCA...GAGGCACGGAAGGAACTGTGCTCCGTTCTCCTCACTGTCATGGTGCCACCAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp GCACGCCTTGGTCTTGAATTCGGTGCTACGCTGACAGCTCTCCTTCTGAATGCAACACACAGCCGGTCATaGAACACGGCTGCCGCCGAC +
Preference number: 5 (lower is better)
Translates to: ARLGLEFGATLTALLLNATHSRS*NTAAAD
Trigger: GTCGGCGGCAGCCGTGTTCAATGACCGGCTGTGTGT...TGCATTCAGAAGGAGAGCTGTCAGCGTAGCACCGAATTCAAGACCAAGGCGTGC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp GGGGTGGGCAGTGCCAGAGGCGAACGGGCACAGGTCATTACTGCGTGTGTGGCTCCAATAAAACTCGGATaGCAGAAGAGAGAGGCCTCA +
Preference number: 5 (lower is better)
Translates to: GVGSARGERAQVITACVAPIKLG*QKREAS
Trigger: TGAGGCCTCTCTCTTCTGCAATCCGAGTTTTATTGG...AGCCACACACGCAGTAATGACCTGTGCCCGTTCGCCTCTGGCACTGCCCACCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp TCAGCAAGCCAGCCCCCGGCCCCCACACCCGTTCATAGGCAGTCGGAATGCAGATGCTTCCGGTATGGATaGCAGGCAGCTATAATATGC +
Preference number: 5 (lower is better)
Translates to: SASQPPAPTPVHRQSECRCFRYG*QAAIIC
Trigger: GCATATTATAGCTGCCTGCAATCCATACCGGAAGCA...TCTGCATTCCGACTGCCTATGAACGGGTGTGGGGGCCGGGGGCTGGCTTGCTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp GCACCAGTCCATGATCAAGTCCACGCCGCAGACGAGGAGAGAGGAGTCTTCTCTGAGGAGCAGATGCCCTaGGCGCTCTCTATGAGCTCT +
Preference number: 5 (lower is better)
Translates to: APVHDQVHAADEERGVFSEEQMP*ALSMSS
Trigger: AGAGCTCATAGAGAGCGCCAAGGGCATCTGCTCCTC...AGAGAAGACTCCTCTCTCCTCGTCTGCGGCGTGGACTTGATCATGGACTGGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp GGGGTGGGCAGTGCCAGAGGCGAACGGGCACAGGTCATTACTGCGTGTGTGGCTCAGATCTTCACACGATaGATGTTTCTGCAGAGCTGG +
Preference number: 5 (lower is better)
Translates to: GVGSARGERAQVITACVAQIFTR*MFLQSW
Trigger: CCAGCTCTGCAGAAACATCAATCGTGTGAAGATCTG...AGCCACACACGCAGTAATGACCTGTGCCCGTTCGCCTCTGGCACTGCCCACCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp AGCTCCGAGTGCAAGTTGAAGACTTCAGCAAGCCAGCCCCCGGCCCCCACACCCCAGTTTCGGACTTCTTaGAGGAATGAGTACTCGGTG +
Preference number: 5 (lower is better)
Translates to: SSECKLKTSASQPPAPTPQFRTS*RNEYSV
Trigger: CACCGAGTACTCATTCCTCAAAGAAGTCCGAAACTG...GGGTGTGGGGGCCGGGGGCTGGCTTGCTGAAGTCTTCAACTTGCACTCGGAGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS TCA 90 bp GAACACATGCAGGATGGTGCGAGCAGCAGGGACTGTGCAGCACACTaGGGAATCCGGAGAGAACTAGATTTCAGCGCCATTGCCCTTGGC +
Preference number: 5 (lower is better)
Translates to: EHMQDGASSRDCAAH*GIRRELDFSAIALG
Trigger: GCCAAGGGCAATGGCGCTGAAATCTAGTTCTCTCCGGATTCCTCAGTGTGCTGCACAGTCCCTGCTGCTCGCACCATCCTGCATGTGTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319921.4
CDS TCA 90 bp CAAGTGTACCAGTGGACTCGCTCCAGACCCTTCCACCTCCGAGCTTaGGCCAGCAAGTCTTCAGGCATGGTTGGAAGAAAAGCATGCGCC +
Preference number: 5 (lower is better)
Translates to: QVYQWTRSRPFHLRA*ASKSSGMVGRKACA
Trigger: GGCGCATGCTTTTCTTCCAACCATGCCTGAAGACTTGCTGGCTCAAGCTCGGAGGTGGAAGGGTCTGGAGCGAGTCCACTGGTACACTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411702.7
ENST00000508628.6
ENST00000558116.5
ENST00000582970.5
CDS TCA 90 bp TTGATGGCCGTGGCCAGGGTCAGGGATGAGCGTTCCACAGACCCATaGCTCTCATTCACAGTCTTCAGCCATTCCAAGTTCCTGGCGGAG +
Preference number: 5 (lower is better)
Translates to: LMAVARVRDERSTDP*LSFTVFSHSKFLAE
Trigger: CTCCGCCAGGAACTTGGAATGGCTGAAGACTGTGAATGAGAGTCATGGGTCTGTGGAACGCTCATCCCTGACCCTGGCCACGGCCATCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000508628.6
ENST00000571908.1
ENST00000582970.5
CDS TCA 90 bp CCTGTCGGCCGTCTCCTCCATACTAACCCTGTAGCCCAAACCAGCTaGCTCCAAACGGCAGATCATCTCCTCAGAGTGCTTCCGGTATGG +
Preference number: 5 (lower is better)
Translates to: PVGRLLHTNPVAQTS*LQTADHLLRVLPVW
Trigger: CCATACCGGAAGCACTCTGAGGAGATGATCTGCCGTTTGGAGTCAGCTGGTTTGGGCTACAGGGTTAGTATGGAGGAGACGGCCGACAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS TCA 90 bp TACACGACGTCTTTCTCTTCAATGACAATCAGGCGGAAGTTGGGGTaGACCCGACATTTGACGCGGTGGGTCCCCAGACCGAGGTCCACG +
Preference number: 5 (lower is better)
Translates to: YTTSFSSMTIRRKLG*TRHLTRWVPRPRST
Trigger: CGTGGACCTCGGTCTGGGGACCCACCGCGTCAAATGTCGGGTTCACCCCAACTTCCGCCTGATTGTCATTGAAGAGAAAGACGTCGTGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS TCA 90 bp GGCTCTCCATGGAGCTGGGCAAGAAACCTGCCCAGAGGAGTCTGCTaGAAGATGTCCACGAACTTCTTGGGCAGTCCTTCTGCGTCTGTG +
Preference number: 5 (lower is better)
Translates to: GSPWSWARNLPRGVC*KMSTNFLGSPSASV
Trigger: CACAGACGCAGAAGGACTGCCCAAGAAGTTCGTGGACATCTTTCAGCAGACTCCTCTGGGCAGGTTTCTTGCCCAGCTCCATGGAGAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000508628.6
ENST00000558116.5
ENST00000582970.5
CDS GCA 90 bp TCGAACTGGGTGAAGAAGCTGTTCAGGTTGATGGTGTCCCAGGTCTaGAGGATGCTGAAGGTGCTGTCCAGCATGAGCGCAGCGGCAATC +
Preference number: 5 (lower is better)
Translates to: SNWVKKLFRLMVSQV*RMLKVLSSMSAAAI
Trigger: GATTGCCGCTGCGCTCATGCTGGACAGCACCTTCAGCATCCTGCAGACCTGGGACACCATCAACCTGAACAGCTTCTTCACCCAGTTCGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319921.4
ENST00000508628.6
ENST00000559070.5
ENST00000582970.5
CDS GCA 90 bp CACTTCCCAATCTCTGAGTTAGCGGAGGAGCTGAGACCCAGCGGGTaGTTCATAGCCCTTAGCTGGGTCATGGCAGAACACAGCTGTGAG +
Preference number: 5 (lower is better)
Translates to: HFPISELAEELRPSG*FIALSWVMAEHSCE
Trigger: CTCACAGCTGTGTTCTGCCATGACCCAGCTAAGGGCTATGAAGCACCCGCTGGGTCTCAGCTCCTCCGCTAACTCAGAGATTGGGAAGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319921.4
CDS GCA 90 bp TGCAGCACACTGAGGAATCCGGAGAGAACTAGATTTCAGCGCCATTaGCCTTGGCGAGGGAGGAGGGTGCCCACTTCCCAATCTCTGAGT +
Preference number: 5 (lower is better)
Translates to: CSTLRNPERTRFQRH*PWRGRRVPTSQSLS
Trigger: ACTCAGAGATTGGGAAGTGGGCACCCTCCTCCCTCGCCAAGGGCAATGGCGCTGAAATCTAGTTCTCTCCGGATTCCTCAGTGTGCTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319921.4
CDS GCA 90 bp GTTTGTGGTCAATGCCTCCAATCGGCGCATGGCAGTCAATGCAGATaGTCTGTTCCATCGGCCTGCCACACTCTCCCACGGAGCAAGGAT +
Preference number: 5 (lower is better)
Translates to: VCGQCLQSAHGSQCR*SVPSACHTLPRSKD
Trigger: ATCCTTGCTCCGTGGGAGAGTGTGGCAGGCCGATGGAACAGAGCATCTGCATTGACTGCCATGCGCCGATTGGAGGCATTGACCACAAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000411702.7
ENST00000508628.6
ENST00000558116.5
ENST00000574909.1
ENST00000582970.5
CDS GCA 90 bp ATGGTGATTGATCCTTTGACACGCACGCTCTGTGTGGACGACACGTaGTCCCAGCATGGTAGGGGAATGACCTACGGGGCTGACTTCGGA +
Preference number: 5 (lower is better)
Translates to: MVIDPLTRTLCVDDT*SQHGRGMTYGADFG
Trigger: TCCGAAGTCAGCCCCGTAGGTCATTCCCCTACCATGCTGGGAGCACGTGTCGTCCACACAGAGCGTGCGTGTCAAAGGATCAATCACCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000411702.7
ENST00000558116.5
CDS GCA 90 bp AAGGGCGCTAGATCTTCTTCCCTAACCCCATCCATGGTGACCATGTaGTTCCCCGGGCTTTGGTCAGAGGTGTGGAGTGATGGTGTGGCA +
Preference number: 5 (lower is better)
Translates to: KGARSSSLTPSMVTM*FPGLWSEVWSDGVA
Trigger: TGCCACACCATCACTCCACACCTCTGACCAAAGCCCGGGGAAGCACATGGTCACCATGGATGGGGTTAGGGAAGAAGATCTAGCGCCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS GCA 90 bp GTCCACGTACTTCTGGCCGCCGAGGTGGACGTAGTACTGGTTGAGTaGGTCGTAGAGGCTCTCGTAGAGGTTCTGCAGGTTGAGAAGCAA +
Preference number: 5 (lower is better)
Translates to: VHVLLAAEVDVVLVE*VVEALVEVLQVEKQ
Trigger: TTGCTTCTCAACCTGCAGAACCTCTACGAGAGCCTCTACGACGCACTCAACCAGTACTACGTCCACCTCGGCGGCCAGAAGTACGTGGAC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS GCA 90 bp GTGGCGCTCCAGGTCTGCCGTGTGCAGGTGTGCCTGAAGGAAATCTaGAAAGGAGTTGTGCCTCTGTCTGTGAAAGTACTCCTGCGACAG +
Preference number: 5 (lower is better)
Translates to: VALQVCRVQVCLKEI*KGVVPLSVKVLLRQ
Trigger: CTGTCGCAGGAGTACTTTCACAGACAGAGGCACAACTCCTTTGCAGATTTCCTTCAGGCACACCTGCACACGGCAGACCTGGAGCGCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS GCA 90 bp ACTGGGCTTCAGGGTGTTTCTTGTCAGCATCTCCGTGCAGGCCATTaGGGCAAATGCGTCCAGGGTCATCTCACATCCAGCCAGCTCATG +
Preference number: 5 (lower is better)
Translates to: TGLQGVSCQHLRAGH*GKCVQGHLTSSQLM
Trigger: CATGAGCTGGCTGGATGTGAGATGACCCTGGACGCATTTGCCGCAATGGCCTGCACGGAGATGCTGACAAGAAACACCCTGAAGCCCAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000508628.6
ENST00000558116.5
ENST00000582970.5
CDS GCA 90 bp CAGCTCCTTCAAGCCATTCGTCTTCTGCAGACGCCACCGGTAGAATaGAGGTGGTTTTGGACCCTGAGGCACAAACCACGTGGACCCCAA +
Preference number: 5 (lower is better)
Translates to: QLLQAIRLLQTPPVE*RWFWTLRHKPRGPQ
Trigger: TTGGGGTCCACGTGGTTTGTGCCTCAGGGTCCAAAACCACCTGCATTCTACCGGTGGCGTCTGCAGAAGACGAATGGCTTGAAGGAGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559864.1
CDS GCA 90 bp CCTGGAGGCCATGGAGACACACAGGTCTACCTATCAGTACCCGCATaGGGAGAGCAGGAACAAATCGGTTCCATGGACTTCCCGCTTCAG +
Preference number: 5 (lower is better)
Translates to: PGGHGDTQVYLSVPA*GEQEQIGSMDFPLQ
Trigger: CTGAAGCGGGAAGTCCATGGAACCGATTTGTTCCTGCTCTCCGCATGCGGGTACTGATAGGTAGACCTGTGTGTCTCCATGGCCTCCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560083.1
ENST00000573919.1
CDS GCA 90 bp GTTTGTGGTCAATGCCTCCAATCGGCGCATGGCAGTCAATGCAGATaGTCTGTTCCATCGGCCTGCCACACTAGGGTGAAGACAGGGCAC +
Preference number: 5 (lower is better)
Translates to: VCGQCLQSAHGSQCR*SVPSACHTRVKTGH
Trigger: GTGCCCTGTCTTCACCCTAGTGTGGCAGGCCGATGGAACAGAGCATCTGCATTGACTGCCATGCGCCGATTGGAGGCATTGACCACAAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572622.1
CDS GCA 90 bp CCCGAGGTTTGTGGTCAATGCCTCCAATCGGCGCATGGCAGTCAATaGAGATGCTCTGTTCCATCGGCCTGCCACACTAGGGTGAAGACA +
Preference number: 5 (lower is better)
Translates to: PEVCGQCLQSAHGSQ*RCSVPSACHTRVKT
Trigger: TGTCTTCACCCTAGTGTGGCAGGCCGATGGAACAGAGCATCTGCATTGACTGCCATGCGCCGATTGGAGGCATTGACCACAAACCTCGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572622.1
CDS CCA 90 bp TCACTCAGCGGCTCTGCGGCTTCCCGCCAGAAGAGCTGGAAGATGTaGCTGTCTCTGAGCAAGTCTATCTTCCCAGCCATTTCTTGGACC +
Preference number: 5 (lower is better)
Translates to: SLSGSAASRQKSWKM*LSLSKSIFPAISWT
Trigger: GGTCCAAGAAATGGCTGGGAAGATAGACTTGCTCAGAGACAGCCACATCTTCCAGCTCTTCTGGCGGGAAGCCGCAGAGCCGCTGAGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000508628.6
ENST00000559070.5
ENST00000582970.5
CDS CCA 90 bp TCCTTAGGCTCACTCAGCGGCTCTGCGGCTTCCCGCCAGAAGAGCTaGAAGATGTGGCTGTCTCTGAGCAAGTCTATCTTCCCAGCCATT +
Preference number: 5 (lower is better)
Translates to: SLGSLSGSAASRQKS*KMWLSLSKSIFPAI
Trigger: AATGGCTGGGAAGATAGACTTGCTCAGAGACAGCCACATCTTCCAGCTCTTCTGGCGGGAAGCCGCAGAGCCGCTGAGTGAGCCTAAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000508628.6
ENST00000559070.5
ENST00000582970.5
CDS CCA 90 bp GCCGATGAATGTCATGGTTGTGTGGTCGTCATTGAAGAAAACGTATaGGTGAGGCTCCGACTCCCACCTCTTCCGGAGGGAGAAGGGCGC +
Preference number: 5 (lower is better)
Translates to: ADECHGCVVVIEENV*VRLRLPPLPEGEGR
Trigger: GCGCCCTTCTCCCTCCGGAAGAGGTGGGAGTCGGAGCCTCACCCATACGTTTTCTTCAATGACGACCACACAACCATGACATTCATCGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS CCA 90 bp GAGAGAAAGGCATTCAGCTGCGCTAAGAGCATCGCGCTGTGCTCGTaGAACCACCTGAAAACTTTCACACAGCGCTCCACGTCCCTGAGG +
Preference number: 5 (lower is better)
Translates to: ERKAFSCAKSIALCS*NHLKTFTQRSTSLR
Trigger: CCTCAGGGACGTGGAGCGCTGTGTGAAAGTTTTCAGGTGGTTCCACGAGCACAGCGCGATGCTCTTAGCGCAGCTGAATGCCTTTCTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS CCA 90 bp GCGGCATGGAAAGATTCTTCACCAACTGTAGCCACGCCTGGGGACTaGGCTTCAGGGTGTTTCTTGTCAGCATCTCCGTGCAGGCCATTG +
Preference number: 5 (lower is better)
Translates to: AAWKDSSPTVATPGD*ASGCFLSASPCRPL
Trigger: CAATGGCCTGCACGGAGATGCTGACAAGAAACACCCTGAAGCCCAGTCCCCAGGCGTGGCTACAGTTGGTGAAGAATCTTTCCATGCCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000508628.6
ENST00000558116.5
ENST00000558488.1
ENST00000582970.5
CDS CCA 90 bp AGCTCCAGCGGCATGGAAAGATTCTTCACCAACTGTAGCCACGCCTaGGGACTGGGCTTCAGGGTGTTTCTTGTCAGCATCTCCGTGCAG +
Preference number: 5 (lower is better)
Translates to: SSSGMERFFTNCSHA*GLGFRVFLVSISVQ
Trigger: CTGCACGGAGATGCTGACAAGAAACACCCTGAAGCCCAGTCCCCAGGCGTGGCTACAGTTGGTGAAGAATCTTTCCATGCCGCTGGAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000508628.6
ENST00000558116.5
ENST00000558488.1
ENST00000582970.5
CDS CCA 90 bp GCCATTCGTCTTCTGCAGACGCCACCGGTAGAATGCAGGTGGTTTTaGACCCTGAGGCACAAACCACGTGGACCCCAAGTCGAACCCAAT +
Preference number: 5 (lower is better)
Translates to: AIRLLQTPPVECRWF*TLRHKPRGPQVEPN
Trigger: ATTGGGTTCGACTTGGGGTCCACGTGGTTTGTGCCTCAGGGTCCAAAACCACCTGCATTCTACCGGTGGCGTCTGCAGAAGACGAATGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559864.1
CDS CCA 90 bp AGGGAGTCCTGGGAAATGAAAAGCAGGAGAGGGATGTCTGTGGGCTaGGTTTCTGGCATCTCACCACCTGGTAAGAGAGCCGAGCCCCTT +
Preference number: 5 (lower is better)
Translates to: RESWEMKSRRGMSVG*VSGISPPGKRAEPL
Trigger: AAGGGGCTCGGCTCTCTTACCAGGTGGTGAGATGCCAGAAACCCAGCCCACAGACATCCCTCTCCTGCTTTTCATTTCCCAGGACTCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000560083.1
ENST00000573919.1
CDS-3UTR CAA 90 bp CTGGACTTCCCCTGTGGCCGCAAGGCTGTGCTTGTACAGGGGTTAAGTGTCCAACCTGAGGCCACGGGTTaGAAAGCAAAGTCAGGTGAC +
Preference number: 5 (lower is better)
Translates to: LDFPCGRKAVLVQGLSVQPEATG*KAKSGD
Trigger: GTCACCTGACTTTGCTTTCAAACCCGTGGCCTCAGG...TTGGACACTTAACCCCTGTACAAGCACAGCCTTGCGGCCACAGGGGAAGTCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319921.4
CDS-3UTR CAA 90 bp GCACCAGTCCATGATCAAGTCCACGCCGCAGACGAGGAGAGAGGAGTCTTCTCTGCCAGGTGTACGTCCTaGTGTCCATGCATCTTTGGC +
Preference number: 5 (lower is better)
Translates to: APVHDQVHAADEERGVFSARCTS*CPCIFG
Trigger: GCCAAAGATGCATGGACACAAGGACGTACACCTGGC...AGAGAAGACTCCTCTCTCCTCGTCTGCGGCGTGGACTTGATCATGGACTGGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp GGGCAGCCGTGGCCAGCAGGGAGCTTCCTCATGTGGCATTGCCTGCGAGACTGTGTTTATGTTCAGCAATaGTTTATGCCTGCAGAGGGG +
Preference number: 5 (lower is better)
Translates to: GQPWPAGSFLMWHCLRDCVYVQQ*FMPAEG
Trigger: CCCCTCTGCAGGCATAAACAATTGCTGAACATAAAC...ACAGTCTCGCAGGCAATGCCACATGAGGAAGCTCCCTGCTGGCCACGGCTGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319921.4
CDS-3UTR CAA 90 bp GGGGAGTCTAAAACCAGCTGTAACCAAGTGTCTGTGTACGGGAACTGGTGTGGGGATCCGGGCCACCTCTaGCAGGTATTCAACCGAGGC +
Preference number: 5 (lower is better)
Translates to: GESKTSCNQVSVYGNWCGDPGHL*QVFNRG
Trigger: GCCTCGGTTGAATACCTGCAAGAGGTGGCCCGGATC...CCCACACCAGTTCCCGTACACAGACACTTGGTTACAGCTGGTTTTAGACTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR CAA 90 bp TCAGCAAGCCAGCCCCCGGCCCCCACACCCGTTCATAGGCAGTCGGAATGCAGAGGAGGTGAAAGGATCTaGCATTCGCCAATGAATTTG +
Preference number: 5 (lower is better)
Translates to: SASQPPAPTPVHRQSECRGGERI*HSPMNL
Trigger: CAAATTCATTGGCGAATGCAAGATCCTTTCACCTCC...TCTGCATTCCGACTGCCTATGAACGGGTGTGGGGGCCGGGGGCTGGCTTGCTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp CACGCCGCAGACGAGGAGAGAGGAGTCTTCTCTCCAAAGTCATCCAAAGATAGCCTGTGTCCCAGCATCTaGGCCAACTGCTCCAGGTCC +
Preference number: 5 (lower is better)
Translates to: HAADEERGVFSPKSSKDSLCPSI*ANCSRS
Trigger: GGACCTGGAGCAGTTGGCCAAGATGCTGGGACACAG...GCTATCTTTGGATGACTTTGGAGAGAAGACTCCTCTCTCCTCGTCTGCGGCGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp GCCAGCTCTGAGGTATCAAAGGAGCTCCGAGTGCAAGTTGAAGACTTCAGCAAGGAGCTGGTGCTGCTCTaGGAGAAGCCTGCGCAGGAC +
Preference number: 5 (lower is better)
Translates to: ASSEVSKELRVQVEDFSKELVLL*EKPAQD
Trigger: GTCCTGCGCAGGCTTCTCCAAGAGCAGCACCAGCTC...CTTGCTGAAGTCTTCAACTTGCACTCGGAGCTCCTTTGATACCTCAGAGCTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp GGAGAACGGAGCACAGTTCCTTCCGTGCCTCCTGCCGGCGCTGCTCAAGGTGTGAGGGTGCAGTTGCTTTaGATGAAGGATAGCATCGTT +
Preference number: 5 (lower is better)
Translates to: GERSTVPSVPPAGAAQGVRVQLL*MKDSIV
Trigger: AACGATGCTATCCTTCATCAAAAGCAACTGCACCCT...CACACCTTGAGCAGCGCCGGCAGGAGGCACGGAAGGAACTGTGCTCCGTTCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp CACGCCGCAGACGAGGAGAGAGGAGTCTTCTCTCCAAAGTCATCCAAAGATAGCGTGAGCTCATACGTTTaGTCGGGGTCGGTGGCCTGG +
Preference number: 5 (lower is better)
Translates to: HAADEERGVFSPKSSKDSVSSYV*SGSVAW
Trigger: CCAGGCCACCGACCCCGACAAAACGTATGAGCTCAC...GCTATCTTTGGATGACTTTGGAGAGAAGACTCCTCTCTCCTCGTCTGCGGCGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp CACTGGTGGCACCATGACAGTGAGGAGAACGGAGCACAGTTCCTTCCGTGCCTCGGTGTCCAACTGATGTaGGTCCTTATTGGCGAAGGC +
Preference number: 5 (lower is better)
Translates to: HWWHHDSEENGAQFLPCLGVQLM*VLIGEG
Trigger: GCCTTCGCCAATAAGGACCAACATCAGTTGGACACC...GAGGCACGGAAGGAACTGTGCTCCGTTCTCCTCACTGTCATGGTGCCACCAGTG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp GCACCAGTCCATGATCAAGTCCACGCCGCAGACGAGGAGAGAGGAGTCTTCTCTAGCCCGAAGAATTCCTaGTCCTGGCGCTTACACACC +
Preference number: 5 (lower is better)
Translates to: APVHDQVHAADEERGVFSSPKNS*SWRLHT
Trigger: GGTGTGTAAGCGCCAGGACAAGGAATTCTTCGGGCT...AGAGAAGACTCCTCTCTCCTCGTCTGCGGCGTGGACTTGATCATGGACTGGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp CACTGGTGGCACCATGACAGTGAGGAGAACGGAGCACAGTTCCTTCCGTGCCTCTTCAGCAGGATCGATTaGGCCTCCTCAGACACCTTC +
Preference number: 5 (lower is better)
Translates to: HWWHHDSEENGAQFLPCLFSRID*ASSDTF
Trigger: GAAGGTGTCTGAGGAGGCCAAATCGATCCTGCTGAA...GAGGCACGGAAGGAACTGTGCTCCGTTCTCCTCACTGTCATGGTGCCACCAGTG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp CACGCCGCAGACGAGGAGAGAGGAGTCTTCTCTCCAAAGTCATCCAAAGATAGCACCACCCTCCGCATATaGCGCGTGCAGCTCTCGTTC +
Preference number: 5 (lower is better)
Translates to: HAADEERGVFSPKSSKDSTTLRI*RVQLSF
Trigger: GAACGAGAGCTGCACGCGCAATATGCGGAGGGTGGT...GCTATCTTTGGATGACTTTGGAGAGAAGACTCCTCTCTCCTCGTCTGCGGCGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp GCCAGCTCTGAGGTATCAAAGGAGCTCCGAGTGCAAGTTGAAGACTTCAGCAAGCTGCTTCCCCCTGCTTaGGCCCCAGGTTGCTTTCGC +
Preference number: 5 (lower is better)
Translates to: ASSEVSKELRVQVEDFSKLLPPA*APGCFR
Trigger: GCGAAAGCAACCTGGGGCCAAAGCAGGGGGAAGCAG...CTTGCTGAAGTCTTCAACTTGCACTCGGAGCTCCTTTGATACCTCAGAGCTGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS TCA 90 bp GCCCGAATCCGTTTCCCAGGAGGAGAGATTGTTCACCTGGCAGGCTaGGCTCACGGCTTCAATGATGCATTTCTCGAAGGTCTTGGCCAC +
Preference number: 5 (lower is better)
Translates to: ARIRFPGGEIVHLAG*AHGFNDAFLEGLGH
Trigger: GTGGCCAAGACCTTCGAGAAATGCATCATTGAAGCCGTGAGCTCAGCCTGCCAGGTGAACAATCTCTCCTCCTGGGAAACGGATTCGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319921.4
CDS TCA 90 bp CCGATGGCCAGCATCAACGACCAGAGGACGGGATCTCTCTCGGTGTaGTTTTTGCTGACGCTGGACTTGGAGAGAAAGGCATTCAGCTGC +
Preference number: 5 (lower is better)
Translates to: PMASINDQRTGSLSV*FLLTLDLERKAFSC
Trigger: GCAGCTGAATGCCTTTCTCTCCAAGTCCAGCGTCAGCAAAAATCACACCGAGAGAGATCCCGTCCTCTGGTCGTTGATGCTGGCCATCGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS TCA 90 bp AAAGGACGCAAAGTACCCTTGGACTCGGTCCTGGACGAGGATGTCTaGGGAGCAGATGCCCTTGGCGCTCTCTATGAGCTCTGTCTCGTT +
Preference number: 5 (lower is better)
Translates to: KGRKVPLDSVLDEDV*GADALGALYELCLV
Trigger: AACGAGACAGAGCTCATAGAGAGCGCCAAGGGCATCTGCTCCTCAGACATCCTCGTCCAGGACCGAGTCCAAGGGTACTTTGCGTCCTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS TCA 90 bp TTACTGTACCAGTGGACTCGCTCCAGACCCTTCCACCTCCGAGCTTaGGCCAGCAAGTCTTCAGGCATGGTTGGAAGAAAAGCATGCGCC +
Preference number: 5 (lower is better)
Translates to: LLYQWTRSRPFHLRA*ASKSSGMVGRKACA
Trigger: GGCGCATGCTTTTCTTCCAACCATGCCTGAAGACTTGCTGGCTCAAGCTCGGAGGTGGAAGGGTCTGGAGCGAGTCCACTGGTACAGTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559864.1
CDS GCA 90 bp TGCTGCCACCCAAACCCTGAGGCAGACCACACAGATGTGGAGTGCTaGGGGAACTGTCCACCTGCTTCCAGGATTCTGTCATTTCATCAG +
Preference number: 5 (lower is better)
Translates to: CCHPNPEADHTDVEC*GNCPPASRILSFHQ
Trigger: CTGATGAAATGACAGAATCCTGGAAGCAGGTGGACAGTTCCCGCAGCACTCCACATCTGTGTGGTCTGCCTCAGGGTTTGGGTGGCAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411702.7
CDS GCA 90 bp CGGGGGCTGCTTCCTGAGCTCAGTGCTCAGGTAAACCAGCTGCTCTaGCGTGTAGAAGTTCAGGTAAAAGTGCTCCATTCGCTTCTGGGT +
Preference number: 5 (lower is better)
Translates to: RGLLPELSAQVNQLL*RVEVQVKVLHSLLG
Trigger: ACCCAGAAGCGAATGGAGCACTTTTACCTGAACTTCTACACGGCAGAGCAGCTGGTTTACCTGAGCACTGAGCTCAGGAAGCAGCCCCCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS GCA 90 bp GACTTGGAGAGAAAGGCATTCAGCTGCGCTAAGAGCATCGCGCTGTaGTCGTGGAACCACCTGAAAACTTTCACACAGCGCTCCACGTCC +
Preference number: 5 (lower is better)
Translates to: DLERKAFSCAKSIAL*SWNHLKTFTQRSTS
Trigger: GGACGTGGAGCGCTGTGTGAAAGTTTTCAGGTGGTTCCACGAGCACAGCGCGATGCTCTTAGCGCAGCTGAATGCCTTTCTCTCCAAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS GCA 90 bp CTCTGTGAAGATGGCGTGGCGCTCCAGGTCTGCCGTGTGCAGGTGTaGCTGAAGGAAATCTGCAAAGGAGTTGTGCCTCTGTCTGTGAAA +
Preference number: 5 (lower is better)
Translates to: LCEDGVALQVCRVQV*LKEICKGVVPLSVK
Trigger: TTTCACAGACAGAGGCACAACTCCTTTGCAGATTTCCTTCAGGCACACCTGCACACGGCAGACCTGGAGCGCCACGCCATCTTCACAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS CCA 90 bp TTGTGTCTGGGCAGTTTATCAAAGTCGACATTGAAGGGCACCCTCTaGAGCAGCAGGCCCTGGTACAGGTCCCTGGTCATGACGTCTCTC +
Preference number: 5 (lower is better)
Translates to: LCLGSLSKSTLKGTL*SSRPWYRSLVMTSL
Trigger: GAGAGACGTCATGACCAGGGACCTGTACCAGGGCCTGCTGCTCCAGAGGGTGCCCTTCAATGTCGACTTTGATAAACTGCCCAGACACAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS CCA 90 bp CTTCAAGCCATTCGTCTTCTGCAGACGCCACCGGTAGAATGCAGGTaGTTTTGGACCCTGAGGCACAAACCACGTGGACCCCAAGTCGAA +
Preference number: 5 (lower is better)
Translates to: LQAIRLLQTPPVECR*FWTLRHKPRGPQVE
Trigger: TTCGACTTGGGGTCCACGTGGTTTGTGCCTCAGGGTCCAAAACCACCTGCATTCTACCGGTGGCGTCTGCAGAAGACGAATGGCTTGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559864.1
CDS CCA 90 bp AGCTGTCCACTGATGGCACTAATGACCGAGCTGGGGAGGGAGTCCTaGGAAATGAAAAGCAGGAGAGGGATGTCTGTGGGCTGGGTTTCT +
Preference number: 5 (lower is better)
Translates to: SCPLMALMTELGRES*EMKSRRGMSVGWVS
Trigger: AGAAACCCAGCCCACAGACATCCCTCTCCTGCTTTTCATTTCCCAGGACTCCCTCCCCAGCTCGGTCATTAGTGCCATCAGTGGACAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000560083.1
ENST00000573919.1
CDS-3UTR CAA 90 bp ATTGTTTATGCCTGCAGAGGGGAGTGGGTGACTAGAGGGGAGGAGGATGATGGCCCGAGGCCGACGCCATaGTGGAGTTATTGTTCTCAG +
Preference number: 5 (lower is better)
Translates to: IVYACRGEWVTRGEEDDGPRPTP*WSYCSQ
Trigger: CTGAGAACAATAACTCCACAATGGCGTCGGCCTCGG...GCCATCATCCTCCTCCCCTCTAGTCACCCACTCCCCTCTGCAGGCATAAACAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319921.4
CDS-3UTR CAA 90 bp GCCAGCTCTGAGGTATCAAAGGAGCTCCGAGTGCAAGTTGAAGACTTCAGCAAGCCGGGCTCAGCGTGCTaGCCTTCACTTCCTGGACAT +
Preference number: 5 (lower is better)
Translates to: ASSEVSKELRVQVEDFSKPGSAC*PSLPGH
Trigger: ATGTCCAGGAAGTGAAGGCAAGCACGCTGAGCCCGG...CTTGCTGAAGTCTTCAACTTGCACTCGGAGCTCCTTTGATACCTCAGAGCTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp AGCTCCGAGTGCAAGTTGAAGACTTCAGCAAGCCAGCCCCCGGCCCCCACACCCTTATCTAGGTGCTTCTaGGAAATGCAGACAATGCCT +
Preference number: 5 (lower is better)
Translates to: SSECKLKTSASQPPAPTPLSRCF*EMQTMP
Trigger: AGGCATTGTCTGCATTTCCAAGAAGCACCTAGATAA...GGGTGTGGGGGCCGGGGGCTGGCTTGCTGAAGTCTTCAACTTGCACTCGGAGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp CTGGACTTCCCCTGTGGCCGCAAGGCTGTGCTTGTACAGGGGTTAAGTGTCCAAATGAACAGACAGCGGTaGACGTACTCGCCCTTCTTC +
Preference number: 5 (lower is better)
Translates to: LDFPCGRKAVLVQGLSVQMNRQR*TYSPFF
Trigger: GAAGAAGGGCGAGTACGTCAACCGCTGTCTGTTCAT...TTGGACACTTAACCCCTGTACAAGCACAGCCTTGCGGCCACAGGGGAAGTCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319921.4
CDS-3UTR CAA 90 bp ACTGCGTGTGTGGCTGAGCTACAAGTCTCCTGGAATGTAAACAATGTTGGTTTATCAACCGAGGCCTCGTaGGCAGGCTCTCGGCCCCGG +
Preference number: 5 (lower is better)
Translates to: TACVAELQVSWNVNNVGLSTEAS*AGSRPR
Trigger: CCGGGGCCGAGAGCCTGCCAACGAGGCCTCGGTTGA...TAAACCAACATTGTTTACATTCCAGGAGACTTGTAGCTCAGCCACACACGCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp GGAATGCAGATCTCGGTGGCAGGTGGCTCTGCACAGTCCAGAGTGATAAAACAAGATCCGGGCCACCTCTaGCAGGTATTCAACCGAGGC +
Preference number: 5 (lower is better)
Translates to: GMQISVAGGSAQSRVIKQDPGHL*QVFNRG
Trigger: GCCTCGGTTGAATACCTGCAAGAGGTGGCCCGGATC...TTGTTTTATCACTCTGGACTGTGCAGAGCCACCTGCCACCGAGATCTGCATTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp ATCAAGTCCACGCCGCAGACGAGGAGAGAGGAGTCTTCTCTCCAAAGTCATCCAGCGTGGGGTGGAGGCTaGCATTGTGGGATCTGTACA +
Preference number: 5 (lower is better)
Translates to: IKSTPQTRREESSLQSHPAWGGG*HCGICT
Trigger: TGTACAGATCCCACAATGCAAGCCTCCACCCCACGC...TGGATGACTTTGGAGAGAAGACTCCTCTCTCCTCGTCTGCGGCGTGGACTTGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp CAGATCTCGGTGGCAGGTGGCTCTGCACAGTCCAGAGTGATAAAACAATCACAGACCGTTCCATCAAGGTaGCTGTCACTAGGCCCCGCC +
Preference number: 5 (lower is better)
Translates to: QISVAGGSAQSRVIKQSQTVPSR*LSLGPA
Trigger: GGCGGGGCCTAGTGACAGCAACCTTGATGGAACGGT...CTGTGATTGTTTTATCACTCTGGACTGTGCAGAGCCACCTGCCACCGAGATCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp CACTGGTGGCACCATGACAGTGAGGAGAACGGAGCACAGTTCCTTCCGTGCCTCAGTCTTCAGGCATGGTaGGAAGAAAAGCATGCGCCA +
Preference number: 5 (lower is better)
Translates to: HWWHHDSEENGAQFLPCLSLQAW*EEKHAP
Trigger: TGGCGCATGCTTTTCTTCCAACCATGCCTGAAGACT...GAGGCACGGAAGGAACTGTGCTCCGTTCTCCTCACTGTCATGGTGCCACCAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp CACGCCGCAGACGAGGAGAGAGGAGTCTTCTCTCCAAAGTCATCCAAAGATAGCTCCCCAAATGGCTCTTaGTGCAGCCGCAGCAGCTGT +
Preference number: 5 (lower is better)
Translates to: HAADEERGVFSPKSSKDSSPNGS*CSRSSC
Trigger: ACAGCTGCTGCGGCTGCACAAAGAGCCATTTGGGGA...GCTATCTTTGGATGACTTTGGAGAGAAGACTCCTCTCTCCTCGTCTGCGGCGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp ATCAAGTCCACGCCGCAGACGAGGAGAGAGGAGTCTTCTCTCCAAAGTCATCCATCAGGTGGTAATGCGTaGCCCTCTGCGAGTTCGAGG +
Preference number: 5 (lower is better)
Translates to: IKSTPQTRREESSLQSHPSGGNA*PSASSR
Trigger: CCTCGAACTCGCAGAGGGCAACGCATTACCACCTGA...TGGATGACTTTGGAGAGAAGACTCCTCTCTCCTCGTCTGCGGCGTGGACTTGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp TGCACTTTCCTGGCGCTTGTTTTTCCAGCTGGAAACGGGATTCGTAATGGTAATAGAGCCTGCAGCCCCTaGCACCGGGCCTCGCTGATG +
Preference number: 5 (lower is better)
Translates to: CTFLALVFPAGNGIRNGNRACSP*HRASLM
Trigger: CATCAGCGAGGCCCGGTGCAAGGGGCTGCAGGCTCT...ATTACCATTACGAATCCCGTTTCCAGCTGGAAAAACAAGCGCCAGGAAAGTGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR CAA 90 bp CACTGGTGGCACCATGACAGTGAGGAGAACGGAGCACAGTTCCTTCCGTGCCTCTCCCTCAGGGTGCAGTaGCTTTTGATGAAGGATAGC +
Preference number: 5 (lower is better)
Translates to: HWWHHDSEENGAQFLPCLSLRVQ*LLMKDS
Trigger: GCTATCCTTCATCAAAAGCAACTGCACCCTGAGGGA...GAGGCACGGAAGGAACTGTGCTCCGTTCTCCTCACTGTCATGGTGCCACCAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp GCCAGCTCTGAGGTATCAAAGGAGCTCCGAGTGCAAGTTGAAGACTTCAGCAAGGAAAAGCTCCTCCGCTaGGCGTGCCACCTCGTAGCT +
Preference number: 5 (lower is better)
Translates to: ASSEVSKELRVQVEDFSKEKLLR*ACHLVA
Trigger: AGCTACGAGGTGGCACGCCAAGCGGAGGAGCTTTTC...CTTGCTGAAGTCTTCAACTTGCACTCGGAGCTCCTTTGATACCTCAGAGCTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp GCACGCCTTGGTCTTGAATTCGGTGCTACGCTGACAGCTCTCCTTCTGAATGCAACACTGCCGTTGATGTaGGGCTGCAGATGGAAGCCG +
Preference number: 5 (lower is better)
Translates to: ARLGLEFGATLTALLLNATLPLM*GCRWKP
Trigger: CGGCTTCCATCTGCAGCCCAACATCAACGGCAGTGT...TGCATTCAGAAGGAGAGCTGTCAGCGTAGCACCGAATTCAAGACCAAGGCGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp GCCAGCTCTGAGGTATCAAAGGAGCTCCGAGTGCAAGTTGAAGACTTCAGCAAGGGACGCAAAGTACCCTaGGACTCGGTCCTGGACGAG +
Preference number: 5 (lower is better)
Translates to: ASSEVSKELRVQVEDFSKGRKVP*DSVLDE
Trigger: CTCGTCCAGGACCGAGTCCAAGGGTACTTTGCGTCC...CTTGCTGAAGTCTTCAACTTGCACTCGGAGCTCCTTTGATACCTCAGAGCTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp GCCAGCTCTGAGGTATCAAAGGAGCTCCGAGTGCAAGTTGAAGACTTCAGCAAGGACAGACGGGGTCCTTaGCATCTCCCAGGCAGATGG +
Preference number: 5 (lower is better)
Translates to: ASSEVSKELRVQVEDFSKDRRGP*HLPGRW
Trigger: CCATCTGCCTGGGAGATGCAAAGGACCCCGTCTGTC...CTTGCTGAAGTCTTCAACTTGCACTCGGAGCTCCTTTGATACCTCAGAGCTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp TTTCAGGCAGGGCATGGGGGACTCCTTCTGAGGCAGAGGTGTAAGCGTTTCAGTAGGATGAATAAAGGGTaGGGAGGGGGAAGGTCAGGG +
Preference number: 5 (lower is better)
Translates to: FQAGHGGLLLRQRCKRFSRMNKG*GGGRSG
Trigger: CCCTGACCTTCCCCCTCCCAACCCTTTATTCATCCT...ACTGAAACGCTTACACCTCTGCCTCAGAAGGAGTCCCCCATGCCCTGCCTGAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS TCA 90 bp GCAGATGGCTTCATGCAGTTTCAGACACACAGTCAGGTAGGATGGTaGCAAGGCCTCCTCGGGAATCTTGTCCCGGTAAGTGTCCAGGAG +
Preference number: 5 (lower is better)
Translates to: ADGFMQFQTHSQVGW*QGLLGNLVPVSVQE
Trigger: CTCCTGGACACTTACCGGGACAAGATTCCCGAGGAGGCCTTGTCACCATCCTACCTGACTGTGTGTCTGAAACTGCATGAAGCCATCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319921.4
ENST00000508628.6
ENST00000559070.5
ENST00000582970.5
CDS TCA 90 bp GCTGCATGTTTGGATCCCCACCAGCTGTGCTCAGAAACCCCAGAGTaGCTTCTACGACAGACAGCACTTCACAGGCATCGCTGTAGGACT +
Preference number: 5 (lower is better)
Translates to: AACLDPHQLCSETPE*LLRQTALHRHRCRT
Trigger: AGTCCTACAGCGATGCCTGTGAAGTGCTGTCTGTCGTAGAAGTCACTCTGGGGTTTCTGAGCACAGCTGGTGGGGATCCAAACATGCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000411702.7
ENST00000427003.7
ENST00000508628.6
ENST00000560083.1
ENST00000573919.1
ENST00000582970.5
CDS TCA 90 bp AGGTCCCTGGTCATGACGTCTCTCTTGATGACCTTCCCAGTCAAGTaGCTGATGGCATCGACACTGCCGTTGATGTTGGGCTGCAGATGG +
Preference number: 5 (lower is better)
Translates to: RSLVMTSLLMTFPVK*LMASTLPLMLGCRW
Trigger: CCATCTGCAGCCCAACATCAACGGCAGTGTCGATGCCATCAGTCACTTGACTGGGAAGGTCATCAAGAGAGACGTCATGACCAGGGACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS TCA 90 bp TGTCACGTGATGGGCTGCATCAGTGGTCCATCACCCTGCATCATTTaGCATAAACCAGGGAACATGCAGGCTCCAAGGGATGCCACCTGG +
Preference number: 5 (lower is better)
Translates to: CHVMGCISGPSPCII*HKPGNMQAPRDATW
Trigger: CCAGGTGGCATCCCTTGGAGCCTGCATGTTCCCTGGTTTATGTCAAATGATGCAGGGTGATGGACCACTGATGCAGCCCATCACGTGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573038.1
CDS GCA 90 bp ACTGCCCTGCAGATCCAGAAGCAAGAGCAGGAGTCGCTGGCAGCCTaGTATATACTACATGTCCTGTCACGTGACCACGGCTTCAGTTTC +
Preference number: 5 (lower is better)
Translates to: TALQIQKQEQESLAA*YILHVLSRDHGFSF
Trigger: GAAACTGAAGCCGTGGTCACGTGACAGGACATGTAGTATATAGCAGGCTGCCAGCGACTCCTGCTCTTGCTTCTGGATCTGCAGGGCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319921.4
ENST00000508628.6
ENST00000582970.5
CDS GCA 90 bp ACCGTTCAGTCCCAGGCTCTCTTTGACCTGCAAGATGACCTTGGCTaGGTGGACAGCCTGGTGCAGGTGATGGTATTCCTTGATCTGTTC +
Preference number: 5 (lower is better)
Translates to: TVQSQALFDLQDDLG*VDSLVQVMVFLDLF
Trigger: GAACAGATCAAGGAATACCATCACCTGCACCAGGCTGTCCACGCAGCCAAGGTCATCTTGCAGGTCAAAGAGAGCCTGGGACTGAACGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000508628.6
ENST00000559070.5
ENST00000582970.5
CDS GCA 90 bp TTCTGGGTCACAAATCTCTTCCAGCTGTCAAGGAAGTGCTCCATCTaGCTGCAGAGGGCTGCCAGCAGCTCAGTGACATCTCCACCTTCT +
Preference number: 5 (lower is better)
Translates to: FWVTNLFQLSRKCSI*LQRAASSSVTSPPS
Trigger: AGAAGGTGGAGATGTCACTGAGCTGCTGGCAGCCCTCTGCAGGCAGATGGAGCACTTCCTTGACAGCTGGAAGAGATTTGTGACCCAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS GCA 90 bp CAGTTTCGGACTTCTTTGAGGAATGAGTACTCGGTGTCAAACTGCTaGAGCCACAGGAGTGTGGGTTTCGGAGCCCTGCCTGTGACCTCT +
Preference number: 5 (lower is better)
Translates to: QFRTSLRNEYSVSNC*SHRSVGFGALPVTS
Trigger: AGAGGTCACAGGCAGGGCTCCGAAACCCACACTCCTGTGGCTGCAGCAGTTTGACACCGAGTACTCATTCCTCAAAGAAGTCCGAAACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS CCA 90 bp TCCCAAGGATGTGGCTTAGGTCACGGTGAAACTCATCTGGTGAGCTaGCATCTGAGGTTAGGAGGTGACACAACCAGTCCAGGCTGCCTT +
Preference number: 5 (lower is better)
Translates to: SQGCGLGHGETHLVS*HLRLGGDTTSPGCL
Trigger: AAGGCAGCCTGGACTGGTTGTGTCACCTCCTAACCTCAGATGCCAGCTCACCAGATGAGTTTCACCGTGACCTAAGCCACATCCTTGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319921.4
ENST00000508628.6
ENST00000559070.5
ENST00000582970.5
CDS CCA 90 bp AGCTGTGAGCCCGAATCCGTTTCCCAGGAGGAGAGATTGTTCACCTaGCAGGCTGAGCTCACGGCTTCAATGATGCATTTCTCGAAGGTC +
Preference number: 5 (lower is better)
Translates to: SCEPESVSQEERLFT*QAELTASMMHFSKV
Trigger: GACCTTCGAGAAATGCATCATTGAAGCCGTGAGCTCAGCCTGCCAGGTGAACAATCTCTCCTCCTGGGAAACGGATTCGGGCTCACAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319921.4
CDS CCA 90 bp CTCTCTGCCCTCCTCCACCTGGTACTGGCAGTTGGAGAGAATCAGTaGAGTCAGGTCCCGCTCCACTTCATAACTGATGACATGCAGTTC +
Preference number: 5 (lower is better)
Translates to: LSALLHLVLAVGENQ*SQVPLHFITDDMQF
Trigger: GAACTGCATGTCATCAGTTATGAAGTGGAGCGGGACCTGACTCCACTGATTCTCTCCAACTGCCAGTACCAGGTGGAGGAGGGCAGAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000411702.7
ENST00000427003.7
ENST00000508628.6
ENST00000560083.1
ENST00000582970.5
CDS CCA 90 bp GCCTCGCTGATGTCCTGGAGCAGCTTTTTGGCCTGGATGAGCTCCTaGTTGATCTGGTCCAGTGTTTCACGGCGAAAGTCGTCGAAGTTA +
Preference number: 5 (lower is better)
Translates to: ASLMSWSSFLAWMSS*LIWSSVSRRKSSKL
Trigger: TAACTTCGACGACTTTCGCCGTGAAACACTGGACCAGATCAACCAGGAGCTCATCCAGGCCAAAAAGCTGCTCCAGGACATCAGCGAGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000508628.6
ENST00000559070.5
ENST00000582970.5
CDS CCA 90 bp CGAAGAATTCCTTGTCCTGGCGCTTACACACCGTTTCGTAGGCTTTaGCAAAGGACGCAAAGTACCCTTGGACTCGGTCCTGGACGAGGA +
Preference number: 5 (lower is better)
Translates to: RRIPCPGAYTPFRRL*QRTQSTLGLGPGRG
Trigger: TCCTCGTCCAGGACCGAGTCCAAGGGTACTTTGCGTCCTTTGCCAAAGCCTACGAAACGGTGTGTAAGCGCCAGGACAAGGAATTCTTCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS CCA 90 bp ACCGGTAGAATGCAGGTGGTTTTGGACCCTGAGGCACAAACCACGTaGACCCCAAGTCGAACCCAATGCTTCATAGCATCTGGACACCCT +
Preference number: 5 (lower is better)
Translates to: TGRMQVVLDPEAQTT*TPSRTQCFIASGHP
Trigger: AGGGTGTCCAGATGCTATGAAGCATTGGGTTCGACTTGGGGTCCACGTGGTTTGTGCCTCAGGGTCCAAAACCACCTGCATTCTACCGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559864.1
CDS CCA 90 bp ATTCACAGTCTTCAGCCATTCCAAGTTCCTGGCGGAGTCACACTATaGGGACAAAAGGAGAGAACACGGGCCACGGTTGGAGCGAGGATC +
Preference number: 5 (lower is better)
Translates to: IHSLQPFQVPGGVTL*GQKERTRATVGARI
Trigger: GATCCTCGCTCCAACCGTGGCCCGTGTTCTCTCCTTTTGTCCCCATAGTGTGACTCCGCCAGGAACTTGGAATGGCTGAAGACTGTGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571908.1
CDS-3UTR CAA 90 bp ATCAAGTCCACGCCGCAGACGAGGAGAGAGGAGTCTTCTCTCCAAAGTCATCCATTGGGGGTTTCCTCCTaGGAGACATGCTGGCACGAA +
Preference number: 5 (lower is better)
Translates to: IKSTPQTRREESSLQSHPLGVSS*ETCWHE
Trigger: TTCGTGCCAGCATGTCTCCAAGGAGGAAACCCCCAA...TGGATGACTTTGGAGAGAAGACTCCTCTCTCCTCGTCTGCGGCGTGGACTTGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp GGGGAGTCTAAAACCAGCTGTAACCAAGTGTCTGTGTACGGGAACTGGTGTGGGCCGAGGCCGACGCCATaGTGGAGTTATTGTTCTCAG +
Preference number: 5 (lower is better)
Translates to: GESKTSCNQVSVYGNWCGPRPTP*WSYCSQ
Trigger: CTGAGAACAATAACTCCACAATGGCGTCGGCCTCGG...CCCACACCAGTTCCCGTACACAGACACTTGGTTACAGCTGGTTTTAGACTCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR CAA 90 bp CACGCCGCAGACGAGGAGAGAGGAGTCTTCTCTCCAAAGTCATCCAAAGATAGCCAGAGCTGCCTCCTTTaGACTCAGGCAACAGGAGCT +
Preference number: 5 (lower is better)
Translates to: HAADEERGVFSPKSSKDSQSCLL*TQATGA
Trigger: AGCTCCTGTTGCCTGAGTCAAAAGGAGGCAGCTCTG...GCTATCTTTGGATGACTTTGGAGAGAAGACTCCTCTCTCCTCGTCTGCGGCGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp AGAAACAGCTCGGCTTTCAAAAAGCTGTCAGCTCAGGTAGCACGCCTTGGTCTTCCGGGCTCAGCGTGCTaGCCTTCACTTCCTGGACAT +
Preference number: 5 (lower is better)
Translates to: RNSSAFKKLSAQVARLGLPGSAC*PSLPGH
Trigger: ATGTCCAGGAAGTGAAGGCAAGCACGCTGAGCCCGG...AAGACCAAGGCGTGCTACCTGAGCTGACAGCTTTTTGAAAGCCGAGCTGTTTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp AGAAACAGCTCGGCTTTCAAAAAGCTGTCAGCTCAGGTAGCACGCCTTGGTCTTATGCTCCGCGGGGAATaGGATTTCCACCAGCCGCCT +
Preference number: 5 (lower is better)
Translates to: RNSSAFKKLSAQVARLGLMLRGE*DFHQPP
Trigger: AGGCGGCTGGTGGAAATCCAATTCCCCGCGGAGCAT...AAGACCAAGGCGTGCTACCTGAGCTGACAGCTTTTTGAAAGCCGAGCTGTTTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp CTGGACTTCCCCTGTGGCCGCAAGGCTGTGCTTGTACAGGGGTTAAGTGTCCAACTGTCCTCTAAGCCTTaGGTGTCCCAGCAACTATTG +
Preference number: 5 (lower is better)
Translates to: LDFPCGRKAVLVQGLSVQLSSKP*VSQQLL
Trigger: CAATAGTTGCTGGGACACCAAAGGCTTAGAGGACAG...TTGGACACTTAACCCCTGTACAAGCACAGCCTTGCGGCCACAGGGGAAGTCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319921.4
CDS-3UTR CAA 90 bp CTGGACTTCCCCTGTGGCCGCAAGGCTGTGCTTGTACAGGGGTTAAGTGTCCAACATTTCTCGAAGGTCTaGGCCACACTGTCCTCTAAG +
Preference number: 5 (lower is better)
Translates to: LDFPCGRKAVLVQGLSVQHFSKV*ATLSSK
Trigger: CTTAGAGGACAGTGTGGCCAAGACCTTCGAGAAATG...TTGGACACTTAACCCCTGTACAAGCACAGCCTTGCGGCCACAGGGGAAGTCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319921.4
CDS-3UTR CAA 90 bp ATTGTTTATGCCTGCAGAGGGGAGTGGGTGACTAGAGGGGAGGAGGATGATGGCTTACCCAGGCTTGTCTaGAACTCCTGGGCTCCCAAA +
Preference number: 5 (lower is better)
Translates to: IVYACRGEWVTRGEEDDGLPRLV*NSWAPK
Trigger: TTTGGGAGCCCAGGAGTTCAAGACAAGCCTGGGTAA...GCCATCATCCTCCTCCCCTCTAGTCACCCACTCCCCTCTGCAGGCATAAACAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319921.4
CDS-3UTR CAA 90 bp GGAATGCAGATCTCGGTGGCAGGTGGCTCTGCACAGTCCAGAGTGATAAAACAAGAGCAAGGATGGCCGTaGGGACAAGTGTACCAGTGG +
Preference number: 5 (lower is better)
Translates to: GMQISVAGGSAQSRVIKQEQGWP*GQVYQW
Trigger: CCACTGGTACACTTGTCCCAACGGCCATCCTTGCTC...TTGTTTTATCACTCTGGACTGTGCAGAGCCACCTGCCACCGAGATCTGCATTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp GGGGAGTCTAAAACCAGCTGTAACCAAGTGTCTGTGTACGGGAACTGGTGTGGGGCTGCAGAAAGCCTTTaGGATCCCTCACTGGAGGCT +
Preference number: 5 (lower is better)
Translates to: GESKTSCNQVSVYGNWCGAAESL*DPSLEA
Trigger: AGCCTCCAGTGAGGGATCCAAAAGGCTTTCTGCAGC...CCCACACCAGTTCCCGTACACAGACACTTGGTTACAGCTGGTTTTAGACTCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR CAA 90 bp TCGGCTTTCAAAAAGCTGTCAGCTCAGGTAGCACGCCTTGGTCTTGAATTCGGTGGGGTGACGAAGACCTaGTGCTGGCTGAAGGCAGAG +
Preference number: 5 (lower is better)
Translates to: SAFKKLSAQVARLGLEFGGVTKT*CWLKAE
Trigger: CTCTGCCTTCAGCCAGCACAAGGTCTTCGTCACCCC...ACCGAATTCAAGACCAAGGCGTGCTACCTGAGCTGACAGCTTTTTGAAAGCCGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp CACGCCGCAGACGAGGAGAGAGGAGTCTTCTCTCCAAAGTCATCCAAAGATAGCGTCACCACGAACTTCTaGAAGCCCCTCAGTGTGTCG +
Preference number: 5 (lower is better)
Translates to: HAADEERGVFSPKSSKDSVTTNF*KPLSVS
Trigger: CGACACACTGAGGGGCTTCAAGAAGTTCGTGGTGAC...GCTATCTTTGGATGACTTTGGAGAGAAGACTCCTCTCTCCTCGTCTGCGGCGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp TCAGCTCCACTGTGGAGTCGCCAGGATGCTGTCATTTTGTCCAGAGGAAAAGTCACACTGCCGTTGATGTaGGGCTGCAGATGGAAGCCG +
Preference number: 5 (lower is better)
Translates to: SAPLWSRQDAVILSRGKVTLPLM*GCRWKP
Trigger: CGGCTTCCATCTGCAGCCCAACATCAACGGCAGTGT...GACTTTTCCTCTGGACAAAATGACAGCATCCTGGCGACTCCACAGTGGAGCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR CAA 90 bp GCACGCCTTGGTCTTGAATTCGGTGCTACGCTGACAGCTCTCCTTCTGAATGCATTTATGGTGTCAGCATaGGTACCACCACGCCGCAGG +
Preference number: 5 (lower is better)
Translates to: ARLGLEFGATLTALLLNAFMVSA*VPPRRR
Trigger: CCTGCGGCGTGGTGGTACCAATGCTGACACCATAAA...TGCATTCAGAAGGAGAGCTGTCAGCGTAGCACCGAATTCAAGACCAAGGCGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp GGGGAGTCTAAAACCAGCTGTAACCAAGTGTCTGTGTACGGGAACTGGTGTGGGTTTATGGTGTCAGCATaGGTACCACCACGCCGCAGG +
Preference number: 5 (lower is better)
Translates to: GESKTSCNQVSVYGNWCGFMVSA*VPPRRR
Trigger: CCTGCGGCGTGGTGGTACCAATGCTGACACCATAAA...CCCACACCAGTTCCCGTACACAGACACTTGGTTACAGCTGGTTTTAGACTCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR CAA 90 bp GGAATGCAGATCTCGGTGGCAGGTGGCTCTGCACAGTCCAGAGTGATAAAACAAGTCTTCAGGGGCATTTaGGGTGAGTCTTCCGCCAGC +
Preference number: 5 (lower is better)
Translates to: GMQISVAGGSAQSRVIKQVFRGI*GESSAS
Trigger: GCTGGCGGAAGACTCACCCAAAATGCCCCTGAAGAC...TTGTTTTATCACTCTGGACTGTGCAGAGCCACCTGCCACCGAGATCTGCATTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp AGAAACAGCTCGGCTTTCAAAAAGCTGTCAGCTCAGGTAGCACGCCTTGGTCTTGGACGCAAAGTACCCTaGGACTCGGTCCTGGACGAG +
Preference number: 5 (lower is better)
Translates to: RNSSAFKKLSAQVARLGLGRKVP*DSVLDE
Trigger: CTCGTCCAGGACCGAGTCCAAGGGTACTTTGCGTCC...AAGACCAAGGCGTGCTACCTGAGCTGACAGCTTTTTGAAAGCCGAGCTGTTTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp TCAGCTCCACTGTGGAGTCGCCAGGATGCTGTCATTTTGTCCAGAGGAAAAGTCTGCTTTGGCCCCAGGTaGCTTTCGCATACACCCCCA +
Preference number: 5 (lower is better)
Translates to: SAPLWSRQDAVILSRGKVCFGPR*LSHTPP
Trigger: TGGGGGTGTATGCGAAAGCAACCTGGGGCCAAAGCA...GACTTTTCCTCTGGACAAAATGACAGCATCCTGGCGACTCCACAGTGGAGCTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS TCA 90 bp GCTGAGGAGCTTAGCATTTTCCGGGCTCAGATCCGCTTTGTACCTTaGACTGATTTCCCCAAATGGCTCTTTGTGCAGCCGCAGCAGCTG +
Preference number: 5 (lower is better)
Translates to: AEELSIFRAQIRFVP*TDFPKWLFVQPQQL
Trigger: CAGCTGCTGCGGCTGCACAAAGAGCCATTTGGGGAAATCAGTTCAAGGTACAAAGCGGATCTGAGCCCGGAAAATGCTAAGCTCCTCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000411702.7
ENST00000427003.7
ENST00000508628.6
ENST00000560083.1
ENST00000582970.5
CDS TCA 90 bp ATGAATGTCATGGTTGTGTGGTCGTCATTGAAGAAAACGTATGGGTaGGGCTCCGACTCCCACCTCTTCCGGAGGGAGAAGGGCGCTAGA +
Preference number: 5 (lower is better)
Translates to: MNVMVVWSSLKKTYG*GSDSHLFRREKGAR
Trigger: TCTAGCGCCCTTCTCCCTCCGGAAGAGGTGGGAGTCGGAGCCTCACCCATACGTTTTCTTCAATGACGACCACACAACCATGACATTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS TCA 90 bp GCATCAACGACCAGAGGACGGGATCTCTCTCGGTGTGATTTTTGCTaGCGCTGGACTTGGAGAGAAAGGCATTCAGCTGCGCTAAGAGCA +
Preference number: 5 (lower is better)
Translates to: ASTTRGRDLSRCDFC*RWTWRERHSAALRA
Trigger: TGCTCTTAGCGCAGCTGAATGCCTTTCTCTCCAAGTCCAGCGTCAGCAAAAATCACACCGAGAGAGATCCCGTCCTCTGGTCGTTGATGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS TCA 90 bp TGCCACACTCTCCCACGGAGCAAGGATGGCCGTTGGGACAAGCTGTaGAGAGAACAGGACACACATTGGCTAATGAGGTTTCACCCAATG +
Preference number: 5 (lower is better)
Translates to: CHTLPRSKDGRWDKL*REQDTHWLMRFHPM
Trigger: CATTGGGTGAAACCTCATTAGCCAATGTGTGTCCTGTTCTCTTCACAGCTTGTCCCAACGGCCATCCTTGCTCCGTGGGAGAGTGTGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574909.1
CDS GCA 90 bp TGTCCCAGCATCTTGGCCAACTGCTCCAGGTCCTTCAGGATGTGCTaGTGCAGAAAGCCTTTTGGATCCCTCACTGGAGGCTTAATGATG +
Preference number: 5 (lower is better)
Translates to: CPSILANCSRSFRMC*CRKPFGSLTGGLMM
Trigger: CATCATTAAGCCTCCAGTGAGGGATCCAAAAGGCTTTCTGCAGCAGCACATCCTGAAGGACCTGGAGCAGTTGGCCAAGATGCTGGGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411702.7
ENST00000508628.6
ENST00000558116.5
ENST00000582970.5
CDS GCA 90 bp GGCGATGGTTTTCCTCAGAGGTACGCCGTCCAGAAAAAGATCCTGTaGCCGTGTTATTTCATCCAGAAGCAGCCTGCTGTCGTCATACGG +
Preference number: 5 (lower is better)
Translates to: GDGFPQRYAVQKKIL*PCYFIQKQPAVVIR
Trigger: CCGTATGACGACAGCAGGCTGCTTCTGGATGAAATAACACGGGCACAGGATCTTTTTCTGGACGGCGTACCTCTGAGGAAAACCATCGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS GCA 90 bp AAGCAAATGGTGGACACCAGGTCTACGAAGAAACTGTTGCACATCTaGCGGAAGCGGGCATGCTTTTCAATGGCTTCCCTGTGCGCTTGG +
Preference number: 5 (lower is better)
Translates to: KQMVDTRSTKKLLHI*RKRACFSMASLCAW
Trigger: CCAAGCGCACAGGGAAGCCATTGAAAAGCATGCCCGCTTCCGGCAGATGTGCAACAGTTTCTTCGTAGACCTGGTGTCCACCATTTGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000508628.6
ENST00000558116.5
ENST00000582970.5
CDS GCA 90 bp TTGGACCCTGAGGCACAAACCACGTGGACCCCAAGTCGAACCCAATaGTTCATAGCATCTGGACACCCTTTGAAGCTCAAAGGAGTGTGG +
Preference number: 5 (lower is better)
Translates to: LDPEAQTTWTPSRTQ*FIASGHPLKLKGVW
Trigger: CCACACTCCTTTGAGCTTCAAAGGGTGTCCAGATGCTATGAAGCATTGGGTTCGACTTGGGGTCCACGTGGTTTGTGCCTCAGGGTCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559864.1
CDS GCA 90 bp TCAGTGGTCCATCACCCTGCATCATTTGACATAAACCAGGGAACATaGAGGCTCCAAGGGATGCCACCTGGTATCAGAGAGAAGCCACGG +
Preference number: 5 (lower is better)
Translates to: SVVHHPASFDINQGT*RLQGMPPGIREKPR
Trigger: CCGTGGCTTCTCTCTGATACCAGGTGGCATCCCTTGGAGCCTGCATGTTCCCTGGTTTATGTCAAATGATGCAGGGTGATGGACCACTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573038.1
CDS CCA 90 bp CACCGTTCCATCAAGGTTGCTGTCACTAGGCCCCGCCCTCAACAATaGCACAGAATTGTCCACGAGCGATGTTGCAAAACGGCTGATATC +
Preference number: 5 (lower is better)
Translates to: HRSIKVAVTRPRPQQ*HRIVHERCCKTADI
Trigger: GATATCAGCCGTTTTGCAACATCGCTCGTGGACAATTCTGTGCCATTGTTGAGGGCGGGGCCTAGTGACAGCAACCTTGATGGAACGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000411702.7
ENST00000508628.6
ENST00000558116.5
ENST00000559864.1
ENST00000582970.5
CDS CCA 90 bp CCTCGAAGAATGTCTGCTGCAGGATCTGCAGTGCCACGTAGTTTTTaGTCAGCACGAGTAAGTAGCGGGACTCAGCATCTTCCTGCTCTC +
Preference number: 5 (lower is better)
Translates to: PRRMSAAGSAVPRSF*SARVSSGTQHLPAL
Trigger: GAGAGCAGGAAGATGCTGAGTCCCGCTACTTACTCGTGCTGACCAAAAACTACGTGGCACTGCAGATCCTGCAGCAGACATTCTTCGAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS CCA 90 bp CAGACCCATGACTCTCATTCACAGTCTTCAGCCATTCCAAGTTCCTaGCGGAGTCACACTATGGGGACAAAAGGAGAGAACACGGGCCAC +
Preference number: 5 (lower is better)
Translates to: QTHDSHSQSSAIPSS*RSHTMGTKGENTGH
Trigger: GTGGCCCGTGTTCTCTCCTTTTGTCCCCATAGTGTGACTCCGCCAGGAACTTGGAATGGCTGAAGACTGTGAATGAGAGTCATGGGTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571908.1
CDS-3UTR CAA 90 bp CTGGACTTCCCCTGTGGCCGCAAGGCTGTGCTTGTACAGGGGTTAAGTGTCCAACTTCTTTTTGCTTTCTaGGACGGTCCAGGAGGCTTT +
Preference number: 5 (lower is better)
Translates to: LDFPCGRKAVLVQGLSVQLLFAF*DGPGGF
Trigger: AAAGCCTCCTGGACCGTCCAAGAAAGCAAAAAGAAG...TTGGACACTTAACCCCTGTACAAGCACAGCCTTGCGGCCACAGGGGAAGTCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000319921.4
CDS-3UTR CAA 90 bp CTGGACTTCCCCTGTGGCCGCAAGGCTGTGCTTGTACAGGGGTTAAGTGTCCAATCTGAGGAAGCGGACTaGTTCCCCTTCTTTTTCTTC +
Preference number: 5 (lower is better)
Translates to: LDFPCGRKAVLVQGLSVQSEEAD*FPFFFF
Trigger: GAAGAAAAAGAAGGGGAACAAGTCCGCTTCCTCAGA...TTGGACACTTAACCCCTGTACAAGCACAGCCTTGCGGCCACAGGGGAAGTCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000319921.4
CDS-3UTR CAA 90 bp GGAATGCAGATCTCGGTGGCAGGTGGCTCTGCACAGTCCAGAGTGATAAAACAAATCTCGTCCTTGGTCTaGGTCTCAGCTTCCTGGCAG +
Preference number: 5 (lower is better)
Translates to: GMQISVAGGSAQSRVIKQISSLV*VSASWQ
Trigger: CTGCCAGGAAGCTGAGACCAAGACCAAGGACGAGAT...TTGTTTTATCACTCTGGACTGTGCAGAGCCACCTGCCACCGAGATCTGCATTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp ATCAAGTCCACGCCGCAGACGAGGAGAGAGGAGTCTTCTCTCCAAAGTCATCCAAAGAAGCTGTTCAGGTaGATGGTGTCCCAGGTCTGC +
Preference number: 5 (lower is better)
Translates to: IKSTPQTRREESSLQSHPKKLFR*MVSQVC
Trigger: GCAGACCTGGGACACCATCAACCTGAACAGCTTCTT...TGGATGACTTTGGAGAGAAGACTCCTCTCTCCTCGTCTGCGGCGTGGACTTGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp TCAAGTCCACGCCGCAGACGAGGAGAGAGGAGTCTTCTCTCCAAAGTCATCCAAAAGAAGCTGTTCAGGTaGATGGTGTCCCAGGTCTGC +
Preference number: 5 (lower is better)
Translates to: SSPRRRRGERSLLSKVIQKKLFR*MVSQVC
Trigger: GCAGACCTGGGACACCATCAACCTGAACAGCTTCTT...TTGGATGACTTTGGAGAGAAGACTCCTCTCTCCTCGTCTGCGGCGTGGACTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp CACTGGTGGCACCATGACAGTGAGGAGAACGGAGCACAGTTCCTTCCGTGCCTCCAGACCTCAATTTCCTaGACGTATGTGAATGAGGCA +
Preference number: 5 (lower is better)
Translates to: HWWHHDSEENGAQFLPCLQTSIS*TYVNEA
Trigger: TGCCTCATTCACATACGTCAAGGAAATTGAGGTCTG...GAGGCACGGAAGGAACTGTGCTCCGTTCTCCTCACTGTCATGGTGCCACCAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp ATTGTTTATGCCTGCAGAGGGGAGTGGGTGACTAGAGGGGAGGAGGATGATGGCATGTTCTGTCAACCTTaGGAGTCTCTTCCCGCACAC +
Preference number: 5 (lower is better)
Translates to: IVYACRGEWVTRGEEDDGMFCQP*ESLPAH
Trigger: GTGTGCGGGAAGAGACTCCAAAGGTTGACAGAACAT...GCCATCATCCTCCTCCCCTCTAGTCACCCACTCCCCTCTGCAGGCATAAACAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319921.4
CDS-3UTR CAA 90 bp GAGTCCTGGACAAGCATTTTGTATTTTTGTAGTTCTCACTCCTTAGGCCCAATTTCAACCGAGGCCTCGTaGGCAGGCTCTCGGCCCCGG +
Preference number: 5 (lower is better)
Translates to: ESWTSILYFCSSHSLGPISTEAS*AGSRPR
Trigger: CCGGGGCCGAGAGCCTGCCAACGAGGCCTCGGTTGA...AATTGGGCCTAAGGAGTGAGAACTACAAAAATACAAAATGCTTGTCCAGGACTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp ATCAAGTCCACGCCGCAGACGAGGAGAGAGGAGTCTTCTCTCCAAAGTCATCCATTAATGCCCAGTGGCTaGCACTCGAGGACAGCTTTG +
Preference number: 5 (lower is better)
Translates to: IKSTPQTRREESSLQSHPLMPSG*HSRTAL
Trigger: CAAAGCTGTCCTCGAGTGCAAGCCACTGGGCATTAA...TGGATGACTTTGGAGAGAAGACTCCTCTCTCCTCGTCTGCGGCGTGGACTTGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp GGGGTGGGCAGTGCCAGAGGCGAACGGGCACAGGTCATTACTGCGTGTGTGGCTTGTGCCATTTTGTTCTaGATGTCCATAAAGAGATGT +
Preference number: 5 (lower is better)
Translates to: GVGSARGERAQVITACVACAILF*MSIKRC
Trigger: ACATCTCTTTATGGACATCAAGAACAAAATGGCACA...AGCCACACACGCAGTAATGACCTGTGCCCGTTCGCCTCTGGCACTGCCCACCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp GGGGTGGGCAGTGCCAGAGGCGAACGGGCACAGGTCATTACTGCGTGTGTGGCTTCAGATCTTGTTAGTTaGATCTTAAGGCACTCACAA +
Preference number: 5 (lower is better)
Translates to: GVGSARGERAQVITACVASDLVS*ILRHSQ
Trigger: TTGTGAGTGCCTTAAGATCAAACTAACAAGATCTGA...AGCCACACACGCAGTAATGACCTGTGCCCGTTCGCCTCTGGCACTGCCCACCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp CGGGGGCCTGCTACACACTGCTCTGGCCAGGCATTCCACTGGGGCAATTGCCTGTCCTGGACAAGCATTTaGTATTTTTGTAGTTCTCAC +
Preference number: 5 (lower is better)
Translates to: RGPATHCSGQAFHWGNCLSWTSI*YFCSSH
Trigger: GTGAGAACTACAAAAATACAAAATGCTTGTCCAGGA...CAGGCAATTGCCCCAGTGGAATGCCTGGCCAGAGCAGTGTGTAGCAGGCCCCCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR CAA 90 bp TTTATGCGTGAGAAAACCAAGGCCCTGATGGTGTCCCTGGTCCAAGTCCAGTGCAAAATGTCATCGAAGTaGTCCGCGGTCCTAGGCCAG +
Preference number: 5 (lower is better)
Translates to: FMREKTKALMVSLVQVQCKMSSK*SAVLGQ
Trigger: CTGGCCTAGGACCGCGGACAACTTCGATGACATTTT...GCACTGGACTTGGACCAGGGACACCATCAGGGCCTTGGTTTTCTCACGCATAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp CACGCCGCAGACGAGGAGAGAGGAGTCTTCTCTCCAAAGTCATCCAAAGATAGCAGTCCCAGGCTCTCTTaGACCTGCAAGATGACCTTG +
Preference number: 5 (lower is better)
Translates to: HAADEERGVFSPKSSKDSSPRLS*TCKMTL
Trigger: CAAGGTCATCTTGCAGGTCAAAGAGAGCCTGGGACT...GCTATCTTTGGATGACTTTGGAGAGAAGACTCCTCTCTCCTCGTCTGCGGCGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp AGGACTAGATATTCATACATGCGAGAGCACACTGAGACTGCATGTTTATTTGGCAGAGCCTGCAGCCCCTaGCACCGGGCCTCGCTGATG +
Preference number: 5 (lower is better)
Translates to: RTRYSYMREHTETACLFGRACSP*HRASLM
Trigger: CATCAGCGAGGCCCGGTGCAAGGGGCTGCAGGCTCT...GCCAAATAAACATGCAGTCTCAGTGTGCTCTCGCATGTATGAATATCTAGTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp GCACGCCTTGGTCTTGAATTCGGTGCTACGCTGACAGCTCTCCTTCTGAATGCACAAGCCAAAGTCCATTaGGAGGGACACACCCTGCTT +
Preference number: 5 (lower is better)
Translates to: ARLGLEFGATLTALLLNAQAKVH*EGHTLL
Trigger: AAGCAGGGTGTGTCCCTCCAAATGGACTTTGGCTTG...TGCATTCAGAAGGAGAGCTGTCAGCGTAGCACCGAATTCAAGACCAAGGCGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp CACTGGTGGCACCATGACAGTGAGGAGAACGGAGCACAGTTCCTTCCGTGCCTCAACTGCATCTTCATTTaGTCGTGCAACCTCTTCACG +
Preference number: 5 (lower is better)
Translates to: HWWHHDSEENGAQFLPCLNCIFI*SCNLFT
Trigger: CGTGAAGAGGTTGCACGACAAAATGAAGATGCAGTT...GAGGCACGGAAGGAACTGTGCTCCGTTCTCCTCACTGTCATGGTGCCACCAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp TTTATGCGTGAGAAAACCAAGGCCCTGATGGTGTCCCTGGTCCAAGTCCAGTGCATGTCTATCACCTCTTaGGGAGGCCTGCAGGTGACT +
Preference number: 5 (lower is better)
Translates to: FMREKTKALMVSLVQVQCMSITS*GGLQVT
Trigger: AGTCACCTGCAGGCCTCCCAAAGAGGTGATAGACAT...GCACTGGACTTGGACCAGGGACACCATCAGGGCCTTGGTTTTCTCACGCATAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp CACGCCGCAGACGAGGAGAGAGGAGTCTTCTCTCCAAAGTCATCCAAAGATAGCAGCAACGTCACTCAGTaGTCCAAAGTCCCACACCAG +
Preference number: 5 (lower is better)
Translates to: HAADEERGVFSPKSSKDSSNVTQ*SKVPHQ
Trigger: CTGGTGTGGGACTTTGGACAACTGAGTGACGTTGCT...GCTATCTTTGGATGACTTTGGAGAGAAGACTCCTCTCTCCTCGTCTGCGGCGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp TCGGCTTTCAAAAAGCTGTCAGCTCAGGTAGCACGCCTTGGTCTTGAATTCGGTGTCTTCAGGGGCATTTaGGGTGAGTCTTCCGCCAGC +
Preference number: 5 (lower is better)
Translates to: SAFKKLSAQVARLGLEFGVFRGI*GESSAS
Trigger: GCTGGCGGAAGACTCACCCAAAATGCCCCTGAAGAC...ACCGAATTCAAGACCAAGGCGTGCTACCTGAGCTGACAGCTTTTTGAAAGCCGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp ATCAAGTCCACGCCGCAGACGAGGAGAGAGGAGTCTTCTCTCCAAAGTCATCCACAGCTGAAAGGGACGTaGTTGGAAGCGTTCTCGGAA +
Preference number: 5 (lower is better)
Translates to: IKSTPQTRREESSLQSHPQLKGT*LEAFSE
Trigger: TTCCGAGAACGCTTCCAACAACGTCCCTTTCAGCTG...TGGATGACTTTGGAGAGAAGACTCCTCTCTCCTCGTCTGCGGCGTGGACTTGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp GGAATGCAGATCTCGGTGGCAGGTGGCTCTGCACAGTCCAGAGTGATAAAACAAGCTTCAGGGTGTTTCTaGTCAGCATCTCCGTGCAGG +
Preference number: 5 (lower is better)
Translates to: GMQISVAGGSAQSRVIKQASGCF*SASPCR
Trigger: CCTGCACGGAGATGCTGACAAGAAACACCCTGAAGC...TTGTTTTATCACTCTGGACTGTGCAGAGCCACCTGCCACCGAGATCTGCATTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp GCCAGCTCTGAGGTATCAAAGGAGCTCCGAGTGCAAGTTGAAGACTTCAGCAAGTGGGTTGAGGTTCTGTaGCGCTTCAGGGCACAGGTA +
Preference number: 5 (lower is better)
Translates to: ASSEVSKELRVQVEDFSKWVEVL*RFRAQV
Trigger: TACCTGTGCCCTGAAGCGCAACAGAACCTCAACCCA...CTTGCTGAAGTCTTCAACTTGCACTCGGAGCTCCTTTGATACCTCAGAGCTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS TCA 90 bp AGGAGGAGAGATTGTTCACCTGGCAGGCTGAGCTCACGGCTTCAATaGTGCATTTCTCGAAGGTCTTGGCCACACTGTCCTCTAAGCCTT +
Preference number: 5 (lower is better)
Translates to: RRRDCSPGRLSSRLQ*CISRRSWPHCPLSL
Trigger: AAGGCTTAGAGGACAGTGTGGCCAAGACCTTCGAGAAATGCATCATTGAAGCCGTGAGCTCAGCCTGCCAGGTGAACAATCTCTCCTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319921.4
CDS TCA 90 bp GAAGGATACTGGTCTGAGACTGGCAGGCTGAGCTCACGGCTTCAATaGTGCATTTCTCGAAGGTCTTGGCCACACTGTCCTCTAAGCCTT +
Preference number: 5 (lower is better)
Translates to: EGYWSETGRLSSRLQ*CISRRSWPHCPLSL
Trigger: AAGGCTTAGAGGACAGTGTGGCCAAGACCTTCGAGAAATGCATCATTGAAGCCGTGAGCTCAGCCTGCCAGTCTCAGACCAGTATCCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000508628.6
ENST00000559070.5
ENST00000582970.5
CDS TCA 90 bp TTGACCTGCAAGATGACCTTGGCTGCGTGGACAGCCTGGTGCAGGTaGTGGTATTCCTTGATCTGTTCGACTCGGTCCTTGATCCAATCT +
Preference number: 5 (lower is better)
Translates to: LTCKMTLAAWTAWCR*WYSLICSTRSLIQS
Trigger: AGATTGGATCAAGGACCGAGTCGAACAGATCAAGGAATACCATCACCTGCACCAGGCTGTCCACGCAGCCAAGGTCATCTTGCAGGTCAA
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000508628.6
ENST00000559070.5
ENST00000582970.5
CDS TCA 90 bp CCACCAGGAAGAGGGGAATCTTCAGCTCGATGCAGACGACCATCATaGAGACGTTCTCCTTCAAGGCCAAGTTCTTGGCGATGGTTTTCC +
Preference number: 5 (lower is better)
Translates to: PPGRGESSARCRRPS*RRSPSRPSSWRWFS
Trigger: GGAAAACCATCGCCAAGAACTTGGCCTTGAAGGAGAACGTCTTCATGATGGTCGTCTGCATCGAGCTGAAGATTCCCCTCTTCCTGGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS TCA 90 bp CCCAAAGATGTTCTGTTTGATCAGCTGCATGGGGCTGACTTCCTCTaGGCACTTGGCCTCGGGCAAATTGGCCAGAAAGATGTCCAAAGC +
Preference number: 5 (lower is better)
Translates to: PKDVLFDQLHGADFL*ALGLGQIGQKDVQS
Trigger: GCTTTGGACATCTTTCTGGCCAATTTGCCCGAGGCCAAGTGCTCAGAGGAAGTCAGCCCCATGCAGCTGATCAAACAGAACATCTTTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS TCA 90 bp CCAGAGGGTGAAACTGGCTCTCTTCTTGCTTCTTTAAAAAGACACTaGGGCGCATCTTGGATACCCGCAAGAAAGAGGCGTGGCACGCGT +
Preference number: 5 (lower is better)
Translates to: PEGETGSLLASLKRH*GASWIPARKRRGTR
Trigger: ACGCGTGCCACGCCTCTTTCTTGCGGGTATCCAAGATGCGCCTCAGTGTCTTTTTAAAGAAGCAAGAAGAGAGCCAGTTTCACCCTCTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000508628.6
ENST00000558116.5
ENST00000582970.5
CDS TCA 90 bp GAGGGTAGATGGTCAGGATTCTGGAAAAGTTCTGCAGACGGCTTCTaGAACGCTGGTAGGCAAGGTGCACCCACGGTAAGGAAACCTCTT +
Preference number: 5 (lower is better)
Translates to: EGRWSGFWKSSADGF*NAGRQGAPTVRKPL
Trigger: AAGAGGTTTCCTTACCGTGGGTGCACCTTGCCTACCAGCGTTTCAGAAGCCGTCTGCAGAACTTTTCCAGAATCCTGACCATCTACCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000508628.6
ENST00000558116.5
ENST00000582970.5
CDS GCA 90 bp CCCAGCATCTTGGCCAACTGCTCCAGGTCCTTCAGGATGTGCTGCTaGAGAAAGCCTTTTGGATCCCTCACTGGAGGCTTAATGATGTTT +
Preference number: 5 (lower is better)
Translates to: PSILANCSRSFRMCC*RKPFGSLTGGLMMF
Trigger: AAACATCATTAAGCCTCCAGTGAGGGATCCAAAAGGCTTTCTGCAGCAGCACATCCTGAAGGACCTGGAGCAGTTGGCCAAGATGCTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411702.7
ENST00000508628.6
ENST00000558116.5
ENST00000582970.5
CDS GCA 90 bp TTACCCCGCAGTGAAACAGGAAATGCTGGAGGCATTCCTCCGGGGTaGCTTCGACAGAGCCTTCTTGATACTGAAACGTGTCTAGGTCTT +
Preference number: 5 (lower is better)
Translates to: LPRSETGNAGGIPPG*LRQSLLDTETCLGL
Trigger: AAGACCTAGACACGTTTCAGTATCAAGAAGGCTCTGTCGAAGGCACCCCGGAGGAATGCCTCCAGCATTTCCTGTTTCACTGCGGGGTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS GCA 90 bp TCCTTGCATTCACAGAGAGTGCGCATCACGGCCTCAAAAGGCCCGTaGGTCTTCACGTCAGAGTTCTCTCGAAGACACTTGTCTAGTAAG +
Preference number: 5 (lower is better)
Translates to: SLHSQRVRITASKGP*VFTSEFSRRHLSSK
Trigger: CTTACTAGACAAGTGTCTTCGAGAGAACTCTGACGTGAAGACGCACGGGCCTTTTGAGGCCGTGATGCGCACTCTCTGTGAATGCAAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000508628.6
ENST00000558116.5
ENST00000582970.5
CDS GCA 90 bp AGGCCTAACACGGAGGGAAACACACTGAGAAGGCAGAAAGCCCCGTaGACAGGATCAGGTTTATCGGGATCACCTGTGCCATTTTGTTCT +
Preference number: 5 (lower is better)
Translates to: RPNTEGNTLRRQKAP*TGSGLSGSPVPFCS
Trigger: AGAACAAAATGGCACAGGTGATCCCGATAAACCTGATCCTGTGCACGGGGCTTTCTGCCTTCTCAGTGTGTTTCCCTCCGTGTTAGGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000560083.1
ENST00000573919.1
CDS CCA 90 bp GTCCTTCAGGATGTGCTGCTGCAGAAAGCCTTTTGGATCCCTCACTaGAGGCTTAATGATGTTTATCAGAGCCTGGGAACTCTGGGACGC +
Preference number: 5 (lower is better)
Translates to: VLQDVLLQKAFWIPH*RLNDVYQSLGTLGR
Trigger: GCGTCCCAGAGTTCCCAGGCTCTGATAAACATCATTAAGCCTCCAGTGAGGGATCCAAAAGGCTTTCTGCAGCAGCACATCCTGAAGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411702.7
ENST00000508628.6
ENST00000558116.5
ENST00000582970.5
CDS CCA 90 bp GAGCACTTGGCCTCGGGCAAATTGGCCAGAAAGATGTCCAAAGCTTaGATGTCATCCTTGCCACTGAAGTTCCTAAGGACAGCCTGTGCA +
Preference number: 5 (lower is better)
Translates to: EHLASGKLARKMSKA*MSSLPLKFLRTACA
Trigger: TGCACAGGCTGTCCTTAGGAACTTCAGTGGCAAGGATGACATCCAAGCTTTGGACATCTTTCTGGCCAATTTGCCCGAGGCCAAGTGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS CCA 90 bp GTGTGTTCACAGTGTCTCTGGGCAGCATCTCTTAAGCGCCCCTTTTaGACGAAGAGGAGAGAGAGCAGGCTCTCAATCACTTCCTTCTCA +
Preference number: 5 (lower is better)
Translates to: VCSQCLWAASLKRPF*TKRRESRLSITSFS
Trigger: TGAGAAGGAAGTGATTGAGAGCCTGCTCTCTCTCCTCTTCGTCCAAAAGGGGCGCTTAAGAGATGCTGCCCAGAGACACTGTGAACACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000508628.6
ENST00000558116.5
ENST00000582970.5
CDS-3UTR CAA 90 bp ACAGTGATGACAGGGCCATCTGAGGAACGGCCTGCAAGCCCGTGTGACTTGTGCTTCCTTTTCTTCTTTTaGCTTTCTTGGACGGTCCAG +
Preference number: 5 (lower is better)
Translates to: TVMTGPSEERPASPCDLCFLFFF*LSWTVQ
Trigger: CTGGACCGTCCAAGAAAGCAAAAAGAAGAAAAGGAA...GCACAAGTCACACGGGCTTGCAGGCCGTTCCTCAGATGGCCCTGTCATCACTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319921.4
CDS-3UTR CAA 90 bp ATTGTTTATGCCTGCAGAGGGGAGTGGGTGACTAGAGGGGAGGAGGATGATGGCTGCAGCTCACAGATATaGCTGTCCCATTTTGACTCC +
Preference number: 5 (lower is better)
Translates to: IVYACRGEWVTRGEEDDGCSSQI*LSHFDS
Trigger: GGAGTCAAAATGGGACAGCAATATCTGTGAGCTGCA...GCCATCATCCTCCTCCCCTCTAGTCACCCACTCCCCTCTGCAGGCATAAACAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000319921.4
CDS-3UTR CAA 90 bp GCACGCCTTGGTCTTGAATTCGGTGCTACGCTGACAGCTCTCCTTCTGAATGCATGTGTCCATGCATCTTaGGCACAGGTTCACCAGGTA +
Preference number: 5 (lower is better)
Translates to: ARLGLEFGATLTALLLNACVHAS*AQVHQV
Trigger: TACCTGGTGAACCTGTGCCAAAGATGCATGGACACA...TGCATTCAGAAGGAGAGCTGTCAGCGTAGCACCGAATTCAAGACCAAGGCGTGC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp CACGCCGCAGACGAGGAGAGAGGAGTCTTCTCTCCAAAGTCATCCAAAGATAGCCATTTCTCGAAGGTCTaGGCCACACTGTCCTCTAAG +
Preference number: 5 (lower is better)
Translates to: HAADEERGVFSPKSSKDSHFSKV*ATLSSK
Trigger: CTTAGAGGACAGTGTGGCCAAGACCTTCGAGAAATG...GCTATCTTTGGATGACTTTGGAGAGAAGACTCCTCTCTCCTCGTCTGCGGCGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp AGGAGGATGATGGCTAAAGGGGCCGGGTTTCTCTTTGAAGTGATGAAAATGCTCTCCCAGGAGGAGAGATaGTTCACCTGGCAGGCTGAG +
Preference number: 5 (lower is better)
Translates to: RRMMAKGAGFLFEVMKMLSQEER*FTWQAE
Trigger: CTCAGCCTGCCAGGTGAACAATCTCTCCTCCTGGGA...GAGCATTTTCATCACTTCAAAGAGAAACCCGGCCCCTTTAGCCATCATCCTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319921.4
CDS-3UTR CAA 90 bp CACGCCGCAGACGAGGAGAGAGGAGTCTTCTCTCCAAAGTCATCCAAAGATAGCACAGAACTGCTTGACTaGCTGCAGGTAGCACTGCTT +
Preference number: 5 (lower is better)
Translates to: HAADEERGVFSPKSSKDSTELLD*LQVALL
Trigger: AAGCAGTGCTACCTGCAGCAAGTCAAGCAGTTCTGT...GCTATCTTTGGATGACTTTGGAGAGAAGACTCCTCTCTCCTCGTCTGCGGCGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp ACTGCGTGTGTGGCTGAGCTACAAGTCTCCTGGAATGTAAACAATGTTGGTTTAGAGCTGGTGCTGCTCTaGGAGAAGCCTGCGCAGGAC +
Preference number: 5 (lower is better)
Translates to: TACVAELQVSWNVNNVGLELVLL*EKPAQD
Trigger: GTCCTGCGCAGGCTTCTCCAAGAGCAGCACCAGCTC...TAAACCAACATTGTTTACATTCCAGGAGACTTGTAGCTCAGCCACACACGCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp GGGGAGTCTAAAACCAGCTGTAACCAAGTGTCTGTGTACGGGAACTGGTGTGGGGGGCTCAGATCCGCTTaGTACCTTGAACTGATTTCC +
Preference number: 5 (lower is better)
Translates to: GESKTSCNQVSVYGNWCGGLRSA*YLELIS
Trigger: GGAAATCAGTTCAAGGTACAAAGCGGATCTGAGCCC...CCCACACCAGTTCCCGTACACAGACACTTGGTTACAGCTGGTTTTAGACTCCCC
52% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR CAA 90 bp TTCCAAAGACCAGTCTTACCAAGTTTCAGATGTCTGGACTCCAAGTGGCAGTTCACCTGCAAGATGACCTaGGCTGCGTGGACAGCCTGG +
Preference number: 5 (lower is better)
Translates to: FQRPVLPSFRCLDSKWQFTCKMT*AAWTAW
Trigger: CCAGGCTGTCCACGCAGCCAAGGTCATCTTGCAGGT...GAACTGCCACTTGGAGTCCAGACATCTGAAACTTGGTAAGACTGGTCTTTGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR CAA 90 bp AGAAACAGCTCGGCTTTCAAAAAGCTGTCAGCTCAGGTAGCACGCCTTGGTCTTCACATAGATGCCTCTTaGGTTGATGGCCGTGGCCAG +
Preference number: 5 (lower is better)
Translates to: RNSSAFKKLSAQVARLGLHIDAS*VDGRGQ
Trigger: CTGGCCACGGCCATCAACCAAAGAGGCATCTATGTG...AAGACCAAGGCGTGCTACCTGAGCTGACAGCTTTTTGAAAGCCGAGCTGTTTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp CACGCCGCAGACGAGGAGAGAGGAGTCTTCTCTCCAAAGTCATCCAAAGATAGCTCCCTCAGGGTGCAGTaGCTTTTGATGAAGGATAGC +
Preference number: 5 (lower is better)
Translates to: HAADEERGVFSPKSSKDSSLRVQ*LLMKDS
Trigger: GCTATCCTTCATCAAAAGCAACTGCACCCTGAGGGA...GCTATCTTTGGATGACTTTGGAGAGAAGACTCCTCTCTCCTCGTCTGCGGCGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp TTTATGCGTGAGAAAACCAAGGCCCTGATGGTGTCCCTGGTCCAAGTCCAGTGCATGATGATCCTCAGCTaGTCCACCAGGCTGAACTCT +
Preference number: 5 (lower is better)
Translates to: FMREKTKALMVSLVQVQCMMILS*STRLNS
Trigger: AGAGTTCAGCCTGGTGGACAAGCTGAGGATCATCAT...GCACTGGACTTGGACCAGGGACACCATCAGGGCCTTGGTTTTCTCACGCATAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp ATCAAGTCCACGCCGCAGACGAGGAGAGAGGAGTCTTCTCTCCAAAGTCATCCAATGATGATCCTCAGCTaGTCCACCAGGCTGAACTCT +
Preference number: 5 (lower is better)
Translates to: IKSTPQTRREESSLQSHPMMILS*STRLNS
Trigger: AGAGTTCAGCCTGGTGGACAAGCTGAGGATCATCAT...TGGATGACTTTGGAGAGAAGACTCCTCTCTCCTCGTCTGCGGCGTGGACTTGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp CACTGGTGGCACCATGACAGTGAGGAGAACGGAGCACAGTTCCTTCCGTGCCTCGGTCGATCAGTCGAATaGTTTTCAGAGGCACATTTT +
Preference number: 5 (lower is better)
Translates to: HWWHHDSEENGAQFLPCLGRSVE*FSEAHF
Trigger: AAAATGTGCCTCTGAAAACAATTCGACTGATCGACC...GAGGCACGGAAGGAACTGTGCTCCGTTCTCCTCACTGTCATGGTGCCACCAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp GCACGCCTTGGTCTTGAATTCGGTGCTACGCTGACAGCTCTCCTTCTGAATGCATTATCAAAGTCGACATaGAAGGGCACCCTCTGGAGC +
Preference number: 5 (lower is better)
Translates to: ARLGLEFGATLTALLLNALSKST*KGTLWS
Trigger: GCTCCAGAGGGTGCCCTTCAATGTCGACTTTGATAA...TGCATTCAGAAGGAGAGCTGTCAGCGTAGCACCGAATTCAAGACCAAGGCGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp ATCAAGTCCACGCCGCAGACGAGGAGAGAGGAGTCTTCTCTCCAAAGTCATCCAAGCCTGTGCAATGTCTaGCGGGGAAGGCTTTCTATT +
Preference number: 5 (lower is better)
Translates to: IKSTPQTRREESSLQSHPSLCNV*RGRLSI
Trigger: AATAGAAAGCCTTCCCCGCAAGACATTGCACAGGCT...TGGATGACTTTGGAGAGAAGACTCCTCTCTCCTCGTCTGCGGCGTGGACTTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp TTTATGCGTGAGAAAACCAAGGCCCTGATGGTGTCCCTGGTCCAAGTCCAGTGCCCAAAGATGTTCTGTTaGATCAGCTGCATGGGGCTG +
Preference number: 5 (lower is better)
Translates to: FMREKTKALMVSLVQVQCPKMFC*ISCMGL
Trigger: CAGCCCCATGCAGCTGATCAAACAGAACATCTTTGG...GCACTGGACTTGGACCAGGGACACCATCAGGGCCTTGGTTTTCTCACGCATAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp CAGATCTCGGTGGCAGGTGGCTCTGCACAGTCCAGAGTGATAAAACAATCACAGACACTGAGGCGCATCTaGGATACCCGCAAGAAAGAG +
Preference number: 5 (lower is better)
Translates to: QISVAGGSAQSRVIKQSQTLRRI*DTRKKE
Trigger: CTCTTTCTTGCGGGTATCCAAGATGCGCCTCAGTGT...CTGTGATTGTTTTATCACTCTGGACTGTGCAGAGCCACCTGCCACCGAGATCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp GCCAGCTCTGAGGTATCAAAGGAGCTCCGAGTGCAAGTTGAAGACTTCAGCAAGACACTGAGGCGCATCTaGGATACCCGCAAGAAAGAG +
Preference number: 5 (lower is better)
Translates to: ASSEVSKELRVQVEDFSKTLRRI*DTRKKE
Trigger: CTCTTTCTTGCGGGTATCCAAGATGCGCCTCAGTGT...CTTGCTGAAGTCTTCAACTTGCACTCGGAGCTCCTTTGATACCTCAGAGCTGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp GCCAGCTCTGAGGTATCAAAGGAGCTCCGAGTGCAAGTTGAAGACTTCAGCAAGCTGAAAGGGACGTTGTaGGAAGCGTTCTCGGAAAGG +
Preference number: 5 (lower is better)
Translates to: ASSEVSKELRVQVEDFSKLKGTL*EAFSER
Trigger: CCTTTCCGAGAACGCTTCCAACAACGTCCCTTTCAG...CTTGCTGAAGTCTTCAACTTGCACTCGGAGCTCCTTTGATACCTCAGAGCTGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp ACTGCGTGTGTGGCTGAGCTACAAGTCTCCTGGAATGTAAACAATGTTGGTTTATCTCCGTGCAGGCCATaGCGGCAAATGCGTCCAGGG +
Preference number: 5 (lower is better)
Translates to: TACVAELQVSWNVNNVGLSPCRP*RQMRPG
Trigger: CCCTGGACGCATTTGCCGCAATGGCCTGCACGGAGA...TAAACCAACATTGTTTACATTCCAGGAGACTTGTAGCTCAGCCACACACGCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp TTCCAAAGACCAGTCTTACCAAGTTTCAGATGTCTGGACTCCAAGTGGCAGTTCGACAGACGGGGTCCTTaGCATCTCCCAGGCAGATGG +
Preference number: 5 (lower is better)
Translates to: FQRPVLPSFRCLDSKWQFDRRGP*HLPGRW
Trigger: CCATCTGCCTGGGAGATGCAAAGGACCCCGTCTGTC...GAACTGCCACTTGGAGTCCAGACATCTGAAACTTGGTAAGACTGGTCTTTGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR CAA 90 bp CAGATCTCGGTGGCAGGTGGCTCTGCACAGTCCAGAGTGATAAAACAATCACAGTCTACGAAGAAACTGTaGCACATCTGCCGGAAGCGG +
Preference number: 5 (lower is better)
Translates to: QISVAGGSAQSRVIKQSQSTKKL*HICRKR
Trigger: CCGCTTCCGGCAGATGTGCAACAGTTTCTTCGTAGA...CTGTGATTGTTTTATCACTCTGGACTGTGCAGAGCCACCTGCCACCGAGATCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp TCAGCTCCACTGTGGAGTCGCCAGGATGCTGTCATTTTGTCCAGAGGAAAAGTCTCTACGAAGAAACTGTaGCACATCTGCCGGAAGCGG +
Preference number: 5 (lower is better)
Translates to: SAPLWSRQDAVILSRGKVSTKKL*HICRKR
Trigger: CCGCTTCCGGCAGATGTGCAACAGTTTCTTCGTAGA...GACTTTTCCTCTGGACAAAATGACAGCATCCTGGCGACTCCACAGTGGAGCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR CAA 90 bp TCAAAAGGCGCTGCTGATGGACTTGGCAGATCAGCAAGACACAGCAAATCTGTCGCGCTGCTGATGGACTaGGCAGATCAGCAAGACACA +
Preference number: 5 (lower is better)
Translates to: SKGAADGLGRSARHSKSVALLMD*ADQQDT
Trigger: TGTGTCTTGCTGATCTGCCAAGTCCATCAGCAGCGC...GACAGATTTGCTGTGTCTTGCTGATCTGCCAAGTCCATCAGCAGCGCCTTTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573038.1
CDS-3UTR CAA 90 bp AGAAACAGCTCGGCTTTCAAAAAGCTGTCAGCTCAGGTAGCACGCCTTGGTCTTTGGCTGTCCTCTGGGTaGAGGTTCTGTTGCGCTTCA +
Preference number: 5 (lower is better)
Translates to: RNSSAFKKLSAQVARLGLWLSSG*RFCCAS
Trigger: TGAAGCGCAACAGAACCTCAACCCAGAGGACAGCCA...AAGACCAAGGCGTGCTACCTGAGCTGACAGCTTTTTGAAAGCCGAGCTGTTTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS TCA 90 bp CGTATTCAAGACTTGCTCAAGTCCCGGAAGCCGGTAGTAAATCCCTaGAAGACAGTCCAGGATATGAGCAGGAAAACGACCCAGGTGCTC +
Preference number: 5 (lower is better)
Translates to: RIQDLLKSRKPVVNP*KTVQDMSRKTTQVL
Trigger: GAGCACCTGGGTCGTTTTCCTGCTCATATCCTGGACTGTCTTTCAGGGATTTACTACCGGCTTCCGGGACTTGAGCAAGTCTTGAATACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319921.4
ENST00000508628.6
ENST00000559070.5
ENST00000582970.5
CDS TCA 90 bp ACTGATGTTGGTCCTTATTGGCGAAGGCCACATTTTCAGCCTCCCTaGCTCTGGAGTAGATCATGTCTGCAGTTGTTCCTCCGTGCACCT +
Preference number: 5 (lower is better)
Translates to: TDVGPYWRRPHFQPP*LWSRSCLQLFLRAP
Trigger: AGGTGCACGGAGGAACAACTGCAGACATGATCTACTCCAGAGTCAGGGAGGCTGAAAATGTGGCCTTCGCCAATAAGGACCAACATCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS TCA 90 bp AGGCTGACAAAGCTGCACTCATCTTCTGTTTTCCTCATGAAACCCTaGGAGGCGCAGAGGACTTCTGTGATCACGCGAGTCCCGTTTTCA +
Preference number: 5 (lower is better)
Translates to: RLTKLHSSSVFLMKP*EAQRTSVITRVPFS
Trigger: TGAAAACGGGACTCGCGTGATCACAGAAGTCCTCTGCGCCTCTCAGGGTTTCATGAGGAAAACAGAAGATGAGTGCAGCTTTGTCAGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS TCA 90 bp AGAGCAGGCTCTCAATCACTTCCTTCTCAGGCGGAGCGTTGTCCTTaGAGCAAATGGTGGACACCAGGTCTACGAAGAAACTGTTGCACA +
Preference number: 5 (lower is better)
Translates to: RAGSQSLPSQAERCP*SKWWTPGLRRNCCT
Trigger: TGTGCAACAGTTTCTTCGTAGACCTGGTGTCCACCATTTGCTTCAAGGACAACGCTCCGCCTGAGAAGGAAGTGATTGAGAGCCTGCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000508628.6
ENST00000558116.5
ENST00000582970.5
CDS TCA 90 bp GCAGTCAATGCAGATGCTCTGTTCCATCGGCCTGCCACACTAGGGTaGAGACAGGGCACTAGAACCACTTCTGGAGCAGTACCATTTTAT +
Preference number: 5 (lower is better)
Translates to: AVNADALFHRPATLG*RQGTRTTSGAVPFY
Trigger: ATAAAATGGTACTGCTCCAGAAGTGGTTCTAGTGCCCTGTCTTCACCCTAGTGTGGCAGGCCGATGGAACAGAGCATCTGCATTGACTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572622.1
CDS GCA 90 bp CCAGAAAAAGATCCTGTGCCCGTGTTATTTCATCCAGAAGCAGCCTaGTGTCGTCATACGGTTTCGGAAAGAACCTGGCGATGGCTTTCC +
Preference number: 5 (lower is better)
Translates to: PEKDPVPVLFHPEAA*CRHTVSERTWRWLS
Trigger: GGAAAGCCATCGCCAGGTTCTTTCCGAAACCGTATGACGACAGCAGGCTGCTTCTGGATGAAATAACACGGGCACAGGATCTTTTTCTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS CCA 90 bp CAACTGCTCCAGGTCCTTCAGGATGTGCTGCTGCAGAAAGCCTTTTaGATCCCTCACTGGAGGCTTAATGATGTTTATCAGAGCCTGGGA +
Preference number: 5 (lower is better)
Translates to: QLLQVLQDVLLQKAF*IPHWRLNDVYQSLG
Trigger: TCCCAGGCTCTGATAAACATCATTAAGCCTCCAGTGAGGGATCCAAAAGGCTTTCTGCAGCAGCACATCCTGAAGGACCTGGAGCAGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411702.7
ENST00000508628.6
ENST00000558116.5
ENST00000582970.5
CDS-3UTR CAA 90 bp TTTATGCGTGAGAAAACCAAGGCCCTGATGGTGTCCCTGGTCCAAGTCCAGTGCTCTGAGGAAGCGGACTaGTTCCCCTTCTTTTTCTTC +
Preference number: 5 (lower is better)
Translates to: FMREKTKALMVSLVQVQCSEEAD*FPFFFF
Trigger: GAAGAAAAAGAAGGGGAACAAGTCCGCTTCCTCAGA...GCACTGGACTTGGACCAGGGACACCATCAGGGCCTTGGTTTTCTCACGCATAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp TTTATGCGTGAGAAAACCAAGGCCCTGATGGTGTCCCTGGTCCAAGTCCAGTGCTGCAGCTCACAGATATaGCTGTCCCATTTTGACTCC +
Preference number: 5 (lower is better)
Translates to: FMREKTKALMVSLVQVQCCSSQI*LSHFDS
Trigger: GGAGTCAAAATGGGACAGCAATATCTGTGAGCTGCA...GCACTGGACTTGGACCAGGGACACCATCAGGGCCTTGGTTTTCTCACGCATAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp GTCTCTTCTAAAAATACAAAAGGAACCGAGTGTGGCGGCACATTGTTCTTTAAATGTCTCCAGGCATCCTaGTGCCGCGGGGCCAGCTCC +
Preference number: 5 (lower is better)
Translates to: VSSKNTKGTECGGTLFFKCLQAS*CRGASS
Trigger: GGAGCTGGCCCCGCGGCACAAGGATGCCTGGAGACA...TTTAAAGAACAATGTGCCGCCACACTCGGTTCCTTTTGTATTTTTAGAAGAGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000319921.4
CDS-3UTR CAA 90 bp TCAGCTCCACTGTGGAGTCGCCAGGATGCTGTCATTTTGTCCAGAGGAAAAGTCCTGTCCTCTAAGCCTTaGGTGTCCCAGCAACTATTG +
Preference number: 5 (lower is better)
Translates to: SAPLWSRQDAVILSRGKVLSSKP*VSQQLL
Trigger: CAATAGTTGCTGGGACACCAAAGGCTTAGAGGACAG...GACTTTTCCTCTGGACAAAATGACAGCATCCTGGCGACTCCACAGTGGAGCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR CAA 90 bp GTCTCTTCTAAAAATACAAAAGGAACCGAGTGTGGCGGCACATTGTTCTTTAAATCAGCGCCATTGCCCTaGGCGAGGGAGGAGGGTGCC +
Preference number: 5 (lower is better)
Translates to: VSSKNTKGTECGGTLFFKSAPLP*AREEGA
Trigger: GGCACCCTCCTCCCTCGCCAAGGGCAATGGCGCTGA...TTTAAAGAACAATGTGCCGCCACACTCGGTTCCTTTTGTATTTTTAGAAGAGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000319921.4
CDS-3UTR CAA 90 bp GCAGATCAGCAAGACACAGCAAATCTGTCAACCCAGCTCAACTGTCATAGCTGTGCATCACGGAGAGCCTaGTATTCATCGCCGTACACC +
Preference number: 5 (lower is better)
Translates to: ADQQDTANLSTQLNCHSCASRRA*YSSPYT
Trigger: GGTGTACGGCGATGAATACAAGGCTCTCCGTGATGC...ACAGCTATGACAGTTGAGCTGGGTTGACAGATTTGCTGTGTCTTGCTGATCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573038.1
CDS-3UTR CAA 90 bp AGAAACAGCTCGGCTTTCAAAAAGCTGTCAGCTCAGGTAGCACGCCTTGGTCTTTTAATGCCCAGTGGCTaGCACTCGAGGACAGCTTTG +
Preference number: 5 (lower is better)
Translates to: RNSSAFKKLSAQVARLGLLMPSG*HSRTAL
Trigger: CAAAGCTGTCCTCGAGTGCAAGCCACTGGGCATTAA...AAGACCAAGGCGTGCTACCTGAGCTGACAGCTTTTTGAAAGCCGAGCTGTTTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp GCCAGCTCTGAGGTATCAAAGGAGCTCCGAGTGCAAGTTGAAGACTTCAGCAAGAGTCTTCAGGCATGGTaGGAAGAAAAGCATGCGCCA +
Preference number: 5 (lower is better)
Translates to: ASSEVSKELRVQVEDFSKSLQAW*EEKHAP
Trigger: TGGCGCATGCTTTTCTTCCAACCATGCCTGAAGACT...CTTGCTGAAGTCTTCAACTTGCACTCGGAGCTCCTTTGATACCTCAGAGCTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp GCACCAGTCCATGATCAAGTCCACGCCGCAGACGAGGAGAGAGGAGTCTTCTCTTCACCATATATTATTTaGGCCACAGGGTTAGAGCTG +
Preference number: 5 (lower is better)
Translates to: APVHDQVHAADEERGVFSSPYII*ATGLEL
Trigger: CAGCTCTAACCCTGTGGCCAAAATAATATATGGTGA...AGAGAAGACTCCTCTCTCCTCGTCTGCGGCGTGGACTTGATCATGGACTGGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp GCACCAGTCCATGATCAAGTCCACGCCGCAGACGAGGAGAGAGGAGTCTTCTCTATGGGCACTCTTTCTTaGCCATTTTTCTGTTCCACA +
Preference number: 5 (lower is better)
Translates to: APVHDQVHAADEERGVFSMGTLS*PFFCST
Trigger: TGTGGAACAGAAAAATGGCAAAGAAAGAGTGCCCAT...AGAGAAGACTCCTCTCTCCTCGTCTGCGGCGTGGACTTGATCATGGACTGGTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp GCACCAGTCCATGATCAAGTCCACGCCGCAGACGAGGAGAGAGGAGTCTTCTCTGAGTCCTGTGCCATTTaGTTCTTGATGTCCATAAAG +
Preference number: 5 (lower is better)
Translates to: APVHDQVHAADEERGVFSESCAI*FLMSIK
Trigger: CTTTATGGACATCAAGAACAAAATGGCACAGGACTC...AGAGAAGACTCCTCTCTCCTCGTCTGCGGCGTGGACTTGATCATGGACTGGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp GCCAGCTCTGAGGTATCAAAGGAGCTCCGAGTGCAAGTTGAAGACTTCAGCAAGTGGATGAGCTCCTGGTaGATCTGGTCCAGTGTTTCA +
Preference number: 5 (lower is better)
Translates to: ASSEVSKELRVQVEDFSKWMSSW*IWSSVS
Trigger: TGAAACACTGGACCAGATCAACCAGGAGCTCATCCA...CTTGCTGAAGTCTTCAACTTGCACTCGGAGCTCCTTTGATACCTCAGAGCTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp TCGGCTTTCAAAAAGCTGTCAGCTCAGGTAGCACGCCTTGGTCTTGAATTCGGTAACACCTTCAGCTCATaGATGCCTCCAAGAGCCTCC +
Preference number: 5 (lower is better)
Translates to: SAFKKLSAQVARLGLEFGNTFSS*MPPRAS
Trigger: GGAGGCTCTTGGAGGCATCAATGAGCTGAAGGTGTT...ACCGAATTCAAGACCAAGGCGTGCTACCTGAGCTGACAGCTTTTTGAAAGCCGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp AGGACTAGATATTCATACATGCGAGAGCACACTGAGACTGCATGTTTATTTGGCCCTCCTCAAAGGTGGTaGCCGGGGTGCAGAGCAGCA +
Preference number: 5 (lower is better)
Translates to: RTRYSYMREHTETACLFGPPQRW*PGCRAA
Trigger: TGCTGCTCTGCACCCCGGCAACCACCTTTGAGGAGG...GCCAAATAAACATGCAGTCTCAGTGTGCTCTCGCATGTATGAATATCTAGTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp AGAAACAGCTCGGCTTTCAAAAAGCTGTCAGCTCAGGTAGCACGCCTTGGTCTTATGTCTATCACCTCTTaGGGAGGCCTGCAGGTGACT +
Preference number: 5 (lower is better)
Translates to: RNSSAFKKLSAQVARLGLMSITS*GGLQVT
Trigger: AGTCACCTGCAGGCCTCCCAAAGAGGTGATAGACAT...AAGACCAAGGCGTGCTACCTGAGCTGACAGCTTTTTGAAAGCCGAGCTGTTTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp TGCACTTTCCTGGCGCTTGTTTTTCCAGCTGGAAACGGGATTCGTAATGGTAATGCATCGACACTGCCGTaGATGTTGGGCTGCAGATGG +
Preference number: 5 (lower is better)
Translates to: CTFLALVFPAGNGIRNGNASTLP*MLGCRW
Trigger: CCATCTGCAGCCCAACATCAACGGCAGTGTCGATGC...ATTACCATTACGAATCCCGTTTCCAGCTGGAAAAACAAGCGCCAGGAAAGTGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR CAA 90 bp GGAATGCAGATCTCGGTGGCAGGTGGCTCTGCACAGTCCAGAGTGATAAAACAAGTCATGACGTCTCTCTaGATGACCTTCCCAGTCAAG +
Preference number: 5 (lower is better)
Translates to: GMQISVAGGSAQSRVIKQVMTSL*MTFPVK
Trigger: CTTGACTGGGAAGGTCATCAAGAGAGACGTCATGAC...TTGTTTTATCACTCTGGACTGTGCAGAGCCACCTGCCACCGAGATCTGCATTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp GCCAGCTCTGAGGTATCAAAGGAGCTCCGAGTGCAAGTTGAAGACTTCAGCAAGTTATCAAAGTCGACATaGAAGGGCACCCTCTGGAGC +
Preference number: 5 (lower is better)
Translates to: ASSEVSKELRVQVEDFSKLSKST*KGTLWS
Trigger: GCTCCAGAGGGTGCCCTTCAATGTCGACTTTGATAA...CTTGCTGAAGTCTTCAACTTGCACTCGGAGCTCCTTTGATACCTCAGAGCTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp AGAGGTGTAAGCGTTTCAGTCCCAGATCGGCTACAGGGAGTGGCGCTCAGCTCCAGGATTTTAAGCATATaGTCGGTTGTGAGCTCATAC +
Preference number: 5 (lower is better)
Translates to: RGVSVSVPDRLQGVALSSRILSI*SVVSSY
Trigger: GTATGAGCTCACAACCGACAATATGCTTAAAATCCT...GGAGCTGAGCGCCACTCCCTGTAGCCGATCTGGGACTGAAACGCTTACACCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR CAA 90 bp TCGGCTTTCAAAAAGCTGTCAGCTCAGGTAGCACGCCTTGGTCTTGAATTCGGTAGCAACGTCACTCAGTaGTCCAAAGTCCCACACCAG +
Preference number: 5 (lower is better)
Translates to: SAFKKLSAQVARLGLEFGSNVTQ*SKVPHQ
Trigger: CTGGTGTGGGACTTTGGACAACTGAGTGACGTTGCT...ACCGAATTCAAGACCAAGGCGTGCTACCTGAGCTGACAGCTTTTTGAAAGCCGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp ATCAAGTCCACGCCGCAGACGAGGAGAGAGGAGTCTTCTCTCCAAAGTCATCCATTCAAGGCCAAGTTCTaGGCGATGGTTTTCCTCAGA +
Preference number: 5 (lower is better)
Translates to: IKSTPQTRREESSLQSHPFKAKF*AMVFLR
Trigger: TCTGAGGAAAACCATCGCCAAGAACTTGGCCTTGAA...TGGATGACTTTGGAGAGAAGACTCCTCTCTCCTCGTCTGCGGCGTGGACTTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp GAGTCCTGGACAAGCATTTTGTATTTTTGTAGTTCTCACTCCTTAGGCCCAATTGTCTTGGCGAGAGACTaGGAGCTGCCGGGCTTCCCC +
Preference number: 5 (lower is better)
Translates to: ESWTSILYFCSSHSLGPIVLARD*ELPGFP
Trigger: GGGGAAGCCCGGCAGCTCCAAGTCTCTCGCCAAGAC...AATTGGGCCTAAGGAGTGAGAACTACAAAAATACAAAATGCTTGTCCAGGACTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp CAGATCTCGGTGGCAGGTGGCTCTGCACAGTCCAGAGTGATAAAACAATCACAGGCTTGGATGTCATCCTaGCCACTGAAGTTCCTAAGG +
Preference number: 5 (lower is better)
Translates to: QISVAGGSAQSRVIKQSQAWMSS*PLKFLR
Trigger: CCTTAGGAACTTCAGTGGCAAGGATGACATCCAAGC...CTGTGATTGTTTTATCACTCTGGACTGTGCAGAGCCACCTGCCACCGAGATCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp GCCAGCTCTGAGGTATCAAAGGAGCTCCGAGTGCAAGTTGAAGACTTCAGCAAGGCTTGGATGTCATCCTaGCCACTGAAGTTCCTAAGG +
Preference number: 5 (lower is better)
Translates to: ASSEVSKELRVQVEDFSKAWMSS*PLKFLR
Trigger: CCTTAGGAACTTCAGTGGCAAGGATGACATCCAAGC...CTTGCTGAAGTCTTCAACTTGCACTCGGAGCTCCTTTGATACCTCAGAGCTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp CAGATCTCGGTGGCAGGTGGCTCTGCACAGTCCAGAGTGATAAAACAATCACAGTTGGCCTCGGGCAAATaGGCCAGAAAGATGTCCAAA +
Preference number: 5 (lower is better)
Translates to: QISVAGGSAQSRVIKQSQLASGK*ARKMSK
Trigger: TTTGGACATCTTTCTGGCCAATTTGCCCGAGGCCAA...CTGTGATTGTTTTATCACTCTGGACTGTGCAGAGCCACCTGCCACCGAGATCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp GCCAGCTCTGAGGTATCAAAGGAGCTCCGAGTGCAAGTTGAAGACTTCAGCAAGTTGGCCTCGGGCAAATaGGCCAGAAAGATGTCCAAA +
Preference number: 5 (lower is better)
Translates to: ASSEVSKELRVQVEDFSKLASGK*ARKMSK
Trigger: TTTGGACATCTTTCTGGCCAATTTGCCCGAGGCCAA...CTTGCTGAAGTCTTCAACTTGCACTCGGAGCTCCTTTGATACCTCAGAGCTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp CACGCCGCAGACGAGGAGAGAGGAGTCTTCTCTCCAAAGTCATCCAAAGATAGCGTGTACTCTTGGTCCTaGGGGAAACCAGAACCAAAA +
Preference number: 5 (lower is better)
Translates to: HAADEERGVFSPKSSKDSVYSWS*GKPEPK
Trigger: TTTTGGTTCTGGTTTCCCCAAGGACCAAGAGTACAC...GCTATCTTTGGATGACTTTGGAGAGAAGACTCCTCTCTCCTCGTCTGCGGCGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp ACTGCGTGTGTGGCTGAGCTACAAGTCTCCTGGAATGTAAACAATGTTGGTTTAGGTTGCAGGCTTCCCTaGCCAACCACTCCAGAGGGT +
Preference number: 5 (lower is better)
Translates to: TACVAELQVSWNVNNVGLGCRLP*PTTPEG
Trigger: ACCCTCTGGAGTGGTTGGCAAGGGAAGCCTGCAACC...TAAACCAACATTGTTTACATTCCAGGAGACTTGTAGCTCAGCCACACACGCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp ACCACAGAAAGGACTAGATATTCATACATGCGAGAGCACACTGAGACTGCATGTGGTTGCAGGCTTCCCTaGCCAACCACTCCAGAGGGT +
Preference number: 5 (lower is better)
Translates to: TTERTRYSYMREHTETACGCRLP*PTTPEG
Trigger: ACCCTCTGGAGTGGTTGGCAAGGGAAGCCTGCAACC...ACATGCAGTCTCAGTGTGCTCTCGCATGTATGAATATCTAGTCCTTTCTGTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp AGGACTAGATATTCATACATGCGAGAGCACACTGAGACTGCATGTTTATTTGGCTCTCCGTGCAGGCCATaGCGGCAAATGCGTCCAGGG +
Preference number: 5 (lower is better)
Translates to: RTRYSYMREHTETACLFGSPCRP*RQMRPG
Trigger: CCCTGGACGCATTTGCCGCAATGGCCTGCACGGAGA...GCCAAATAAACATGCAGTCTCAGTGTGCTCTCGCATGTATGAATATCTAGTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS TCA 90 bp CCTCCTCTGATGAAGACTTTATGGAGGTCAGGATTGAATGGGAAATaGAGAGAGATGATGGCGTGGAAGAACACGGTGACTCCTCCACCC +
Preference number: 5 (lower is better)
Translates to: PPLMKTLWRSGLNGK*REMMAWKNTVTPPP
Trigger: GGGTGGAGGAGTCACCGTGTTCTTCCACGCCATCATCTCTCTTCATTTCCCATTCAATCCTGACCTCCATAAAGTCTTCATCAGAGGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319921.4
ENST00000508628.6
ENST00000559070.5
ENST00000573548.1
ENST00000582970.5
CDS TCA 90 bp TCTCAAGCGATCTCCTCAGTTTGTTCCATGTGGACAGAAAGACTGTaGTCCTGTTGTGAAGCAGCTGCCTCAACCCATCTGAGCTGTGCT +
Preference number: 5 (lower is better)
Translates to: SQAISSVCSMWTERL*SCCEAAASTHLSCA
Trigger: AGCACAGCTCAGATGGGTTGAGGCAGCTGCTTCACAACAGGATCACAGTCTTTCTGTCCACATGGAACAAACTGAGGAGATCGCTTGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000411702.7
ENST00000427003.7
ENST00000508628.6
ENST00000570776.1
ENST00000582970.5
CDS TCA 90 bp ATATGCAGGCCAGAGTCCTCAGCCAGAGGCTGGCCATCCACCATATaGTCACACAGGACTTCTTTGATACAGCTTATAGCTTCCGTTGTG +
Preference number: 5 (lower is better)
Translates to: ICRPESSARGWPSTI*SHRTSLIQLIASVV
Trigger: CACAACGGAAGCTATAAGCTGTATCAAAGAAGTCCTGTGTGATCATATGGTGGATGGCCAGCCTCTGGCTGAGGACTCTGGCCTGCATAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS TCA 90 bp CCGATGAAGACGTCAGAGGGGCTGTATTTGTGCCTCTTCTGGAAATaGTGTGCTTTGACATTGATGAACTTCTCCACCCACGCACAGAGC +
Preference number: 5 (lower is better)
Translates to: PMKTSEGLYLCLFWK*CALTLMNFSTHAQS
Trigger: GCTCTGTGCGTGGGTGGAGAAGTTCATCAATGTCAAAGCACATCATTTCCAGAAGAGGCACAAATACAGCCCCTCTGACGTCTTCATCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS TCA 90 bp GGTCACAGGTTTCTTTCTGCAGACCACCCCACATTAGTAGCTTTATaGAGGGTGTTGAGTGACAGGCATGGTGGCTTCCTGTTCCTTGGT +
Preference number: 5 (lower is better)
Translates to: GHRFLSADHPTLVAL*RVLSDRHGGFLFLG
Trigger: ACCAAGGAACAGGAAGCCACCATGCCTGTCACTCAACACCCTTCATAAAGCTACTAATGTGGGGTGGTCTGCAGAAAGAAACCTGTGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559603.1
CDS GCA 90 bp GCCGCTGATGTTTTGATAGGTCAGAGTCAACACATCCAGCATCCATaGTGGCCTCCTTTTAGTAAACCTTCCTGTGCTCCAAAGGTCGGA +
Preference number: 5 (lower is better)
Translates to: AADVLIGQSQHIQHP*WPPFSKPSCAPKVG
Trigger: TCCGACCTTTGGAGCACAGGAAGGTTTACTAAAAGGAGGCCAGCATGGATGCTGGATGTGTTGACTCTGACCTATCAAAACATCAGCGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559603.1
CDS CCA 90 bp CTCACAGCTTCACATTGCTCTGGCGTGGGGTGGAGGCTTGCATTGTaGGATCTGTACAAAATAGCCACCTCTCTAAACAGTGTTAACAGG +
Preference number: 5 (lower is better)
Translates to: LTASHCSGVGWRLAL*DLYKIATSLNSVNR
Trigger: CCTGTTAACACTGTTTAGAGAGGTGGCTATTTTGTACAGATCCCACAATGCAAGCCTCCACCCCACGCCAGAGCAATGTGAAGCTGTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411702.7
ENST00000508628.6
ENST00000558116.5
ENST00000582970.5
CDS CCA 90 bp CTGAGGAAGCCTCTGATGGAGCTGTATTCAACTTGCTGGACGTTCTaGAACTGCTTCACTAGATCCCTTTGCAAGGCCAAAATCTCAGGC +
Preference number: 5 (lower is better)
Translates to: LRKPLMELYSTCWTF*NCFTRSLCKAKISG
Trigger: GCCTGAGATTTTGGCCTTGCAAAGGGATCTAGTGAAGCAGTTCCAGAACGTCCAGCAAGTTGAATACAGCTCCATCAGAGGCTTCCTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000411702.7
ENST00000427003.7
ENST00000508628.6
ENST00000570776.1
ENST00000582970.5
CDS CCA 90 bp TTGATCTGTTCGACTCGGTCCTTGATCCAATCTCTTTGGTCCTGGTaGTCCACGGTGCACATGATCTTAAGTTCTGAATCCAGGTCCGTG +
Preference number: 5 (lower is better)
Translates to: LICSTRSLIQSLWSW*STVHMILSSESRSV
Trigger: CACGGACCTGGATTCAGAACTTAAGATCATGTGCACCGTGGACCACCAGGACCAAAGAGATTGGATCAAGGACCGAGTCGAACAGATCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000508628.6
ENST00000559070.5
ENST00000582970.5
CDS CCA 90 bp TCCTTGATCTGTTCGACTCGGTCCTTGATCCAATCTCTTTGGTCCTaGTGGTCCACGGTGCACATGATCTTAAGTTCTGAATCCAGGTCC +
Preference number: 5 (lower is better)
Translates to: SLICSTRSLIQSLWS*WSTVHMILSSESRS
Trigger: GGACCTGGATTCAGAACTTAAGATCATGTGCACCGTGGACCACCAGGACCAAAGAGATTGGATCAAGGACCGAGTCGAACAGATCAAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000508628.6
ENST00000559070.5
ENST00000582970.5
CDS CCA 90 bp CAATGCTTCATAGCATCTGGACACCCTTTGAAGCTCAAAGGAGTGTaGGGTCATCTAGACCCCAACACTTACTGTACCAGTGGACTCGCT +
Preference number: 5 (lower is better)
Translates to: QCFIASGHPLKLKGV*GHLDPNTYCTSGLA
Trigger: AGCGAGTCCACTGGTACAGTAAGTGTTGGGGTCTAGATGACCCCACACTCCTTTGAGCTTCAAAGGGTGTCCAGATGCTATGAAGCATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559864.1
CDS-3UTR CAA 90 bp TCGGCTTTCAAAAAGCTGTCAGCTCAGGTAGCACGCCTTGGTCTTGAATTCGGTTCCTGGCAGTGTGTTTaGAAAGGAGGAGTGGTTGCT +
Preference number: 5 (lower is better)
Translates to: SAFKKLSAQVARLGLEFGSWQCV*KGGVVA
Trigger: AGCAACCACTCCTCCTTTCAAAACACACTGCCAGGA...ACCGAATTCAAGACCAAGGCGTGCTACCTGAGCTGACAGCTTTTTGAAAGCCGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp TGCACTTTCCTGGCGCTTGTTTTTCCAGCTGGAAACGGGATTCGTAATGGTAATATCTCGTCCTTGGTCTaGGTCTCAGCTTCCTGGCAG +
Preference number: 5 (lower is better)
Translates to: CTFLALVFPAGNGIRNGNISSLV*VSASWQ
Trigger: CTGCCAGGAAGCTGAGACCAAGACCAAGGACGAGAT...ATTACCATTACGAATCCCGTTTCCAGCTGGAAAAACAAGCGCCAGGAAAGTGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR CAA 90 bp GCCAGCTCTGAGGTATCAAAGGAGCTCCGAGTGCAAGTTGAAGACTTCAGCAAGTGCAGCTCACAGATATaGCTGTCCCATTTTGACTCC +
Preference number: 5 (lower is better)
Translates to: ASSEVSKELRVQVEDFSKCSSQI*LSHFDS
Trigger: GGAGTCAAAATGGGACAGCAATATCTGTGAGCTGCA...CTTGCTGAAGTCTTCAACTTGCACTCGGAGCTCCTTTGATACCTCAGAGCTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp CACGCCGCAGACGAGGAGAGAGGAGTCTTCTCTCCAAAGTCATCCAAAGATAGCCAGACCTCAATTTCCTaGACGTATGTGAATGAGGCA +
Preference number: 5 (lower is better)
Translates to: HAADEERGVFSPKSSKDSQTSIS*TYVNEA
Trigger: TGCCTCATTCACATACGTCAAGGAAATTGAGGTCTG...GCTATCTTTGGATGACTTTGGAGAGAAGACTCCTCTCTCCTCGTCTGCGGCGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp AGGACTAGATATTCATACATGCGAGAGCACACTGAGACTGCATGTTTATTTGGCATGCTCCGCGGGGAATaGGATTTCCACCAGCCGCCT +
Preference number: 5 (lower is better)
Translates to: RTRYSYMREHTETACLFGMLRGE*DFHQPP
Trigger: AGGCGGCTGGTGGAAATCCAATTCCCCGCGGAGCAT...GCCAAATAAACATGCAGTCTCAGTGTGCTCTCGCATGTATGAATATCTAGTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp TCAAGTCCACGCCGCAGACGAGGAGAGAGGAGTCTTCTCTCCAAAGTCATCCAACATTCGCCAATGAATTaGCTCACAGCTTCACATTGC +
Preference number: 5 (lower is better)
Translates to: SSPRRRRGERSLLSKVIQHSPMN*LTASHC
Trigger: GCAATGTGAAGCTGTGAGCAAATTCATTGGCGAATG...TTGGATGACTTTGGAGAGAAGACTCCTCTCTCCTCGTCTGCGGCGTGGACTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp AGGACTAGATATTCATACATGCGAGAGCACACTGAGACTGCATGTTTATTTGGCACCGTTCCATCAAGGTaGCTGTCACTAGGCCCCGCC +
Preference number: 5 (lower is better)
Translates to: RTRYSYMREHTETACLFGTVPSR*LSLGPA
Trigger: GGCGGGGCCTAGTGACAGCAACCTTGATGGAACGGT...GCCAAATAAACATGCAGTCTCAGTGTGCTCTCGCATGTATGAATATCTAGTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp TGCACTTTCCTGGCGCTTGTTTTTCCAGCTGGAAACGGGATTCGTAATGGTAATAAGCCGTCCCGAGGTTaGTGGTCAATGCCTCCAATC +
Preference number: 5 (lower is better)
Translates to: CTFLALVFPAGNGIRNGNKPSRG*WSMPPI
Trigger: GATTGGAGGCATTGACCACAAACCTCGGGACGGCTT...ATTACCATTACGAATCCCGTTTCCAGCTGGAAAAACAAGCGCCAGGAAAGTGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR CAA 90 bp TCAGCTCCACTGTGGAGTCGCCAGGATGCTGTCATTTTGTCCAGAGGAAAAGTCAGCGATCTCCTCAGTTaGTTCCATGTGGACAGAAAG +
Preference number: 5 (lower is better)
Translates to: SAPLWSRQDAVILSRGKVSDLLS*FHVDRK
Trigger: CTTTCTGTCCACATGGAACAAACTGAGGAGATCGCT...GACTTTTCCTCTGGACAAAATGACAGCATCCTGGCGACTCCACAGTGGAGCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR CAA 90 bp AGGACTAGATATTCATACATGCGAGAGCACACTGAGACTGCATGTTTATTTGGCAGAGTGGGTATTCCCTaGAGGCTCAGCCGGGGCTTG +
Preference number: 5 (lower is better)
Translates to: RTRYSYMREHTETACLFGRVGIP*RLSRGL
Trigger: CAAGCCCCGGCTGAGCCTCAAGGGAATACCCACTCT...GCCAAATAAACATGCAGTCTCAGTGTGCTCTCGCATGTATGAATATCTAGTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp TCGGCTTTCAAAAAGCTGTCAGCTCAGGTAGCACGCCTTGGTCTTGAATTCGGTTCCTGCTTCCTTCTCTaGCTGGGTATGGCATTAGCA +
Preference number: 5 (lower is better)
Translates to: SAFKKLSAQVARLGLEFGSCFLL*LGMALA
Trigger: TGCTAATGCCATACCCAGCAAGAGAAGGAAGCAGGA...ACCGAATTCAAGACCAAGGCGTGCTACCTGAGCTGACAGCTTTTTGAAAGCCGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000508628.6
CDS-3UTR CAA 90 bp GGAATGCAGATCTCGGTGGCAGGTGGCTCTGCACAGTCCAGAGTGATAAAACAAACAGCTATCAGCCTCTaGGCATCCTCTGTGACATTT +
Preference number: 5 (lower is better)
Translates to: GMQISVAGGSAQSRVIKQTAISL*ASSVTF
Trigger: AAATGTCACAGAGGATGCCAAGAGGCTGATAGCTGT...TTGTTTTATCACTCTGGACTGTGCAGAGCCACCTGCCACCGAGATCTGCATTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp AGAAACAGCTCGGCTTTCAAAAAGCTGTCAGCTCAGGTAGCACGCCTTGGTCTTTGTTCGACTCGGTCCTaGATCCAATCTCTTTGGTCC +
Preference number: 5 (lower is better)
Translates to: RNSSAFKKLSAQVARLGLCSTRS*IQSLWS
Trigger: GGACCAAAGAGATTGGATCAAGGACCGAGTCGAACA...AAGACCAAGGCGTGCTACCTGAGCTGACAGCTTTTTGAAAGCCGAGCTGTTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp ACTGCGTGTGTGGCTGAGCTACAAGTCTCCTGGAATGTAAACAATGTTGGTTTAGTCTGGGGAAATCTTTaGGCCACCTTTGGGCGCCTG +
Preference number: 5 (lower is better)
Translates to: TACVAELQVSWNVNNVGLVWGNL*ATFGRL
Trigger: CAGGCGCCCAAAGGTGGCCAAAAGATTTCCCCAGAC...TAAACCAACATTGTTTACATTCCAGGAGACTTGTAGCTCAGCCACACACGCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp AGAAACAGCTCGGCTTTCAAAAAGCTGTCAGCTCAGGTAGCACGCCTTGGTCTTCTCTCCACTTCCGTGTaGTTACGATCCTTCTTGCCA +
Preference number: 5 (lower is better)
Translates to: RNSSAFKKLSAQVARLGLLSTSV*LRSFLP
Trigger: TGGCAAGAAGGATCGTAACAACACGGAAGTGGAGAG...AAGACCAAGGCGTGCTACCTGAGCTGACAGCTTTTTGAAAGCCGAGCTGTTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp TTTTTCCAGCTGGAAACGGGATTCGTAATGGTAATGGTTGAACTTAATGAACGTCCACAGACGACGAGGTaGGGCTGGCCGACCTGCAGA +
Preference number: 5 (lower is better)
Translates to: FFQLETGFVMVMVELNERPQTTR*GWPTCR
Trigger: TCTGCAGGTCGGCCAGCCCAACCTCGTCGTCTGTGG...ACGTTCATTAAGTTCAACCATTACCATTACGAATCCCGTTTCCAGCTGGAAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR CAA 90 bp AGGACTAGATATTCATACATGCGAGAGCACACTGAGACTGCATGTTTATTTGGCTGGGCAGGGGCTGGCTaGGGGTTTGCATGTAGACAG +
Preference number: 5 (lower is better)
Translates to: RTRYSYMREHTETACLFGWAGAG*GFACRQ
Trigger: CTGTCTACATGCAAACCCCAAGCCAGCCCCTGCCCA...GCCAAATAAACATGCAGTCTCAGTGTGCTCTCGCATGTATGAATATCTAGTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp AGGACTAGATATTCATACATGCGAGAGCACACTGAGACTGCATGTTTATTTGGCGAAAAGCTCCTCCGCTaGGCGTGCCACCTCGTAGCT +
Preference number: 5 (lower is better)
Translates to: RTRYSYMREHTETACLFGEKLLR*ACHLVA
Trigger: AGCTACGAGGTGGCACGCCAAGCGGAGGAGCTTTTC...GCCAAATAAACATGCAGTCTCAGTGTGCTCTCGCATGTATGAATATCTAGTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp TTTATGCGTGAGAAAACCAAGGCCCTGATGGTGTCCCTGGTCCAAGTCCAGTGCAACTGCATCTTCATTTaGTCGTGCAACCTCTTCACG +
Preference number: 5 (lower is better)
Translates to: FMREKTKALMVSLVQVQCNCIFI*SCNLFT
Trigger: CGTGAAGAGGTTGCACGACAAAATGAAGATGCAGTT...GCACTGGACTTGGACCAGGGACACCATCAGGGCCTTGGTTTTCTCACGCATAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp TTTATGCGTGAGAAAACCAAGGCCCTGATGGTGTCCCTGGTCCAAGTCCAGTGCAAAGATGTCCAAAGCTaGGATGTCATCCTTGCCACT +
Preference number: 5 (lower is better)
Translates to: FMREKTKALMVSLVQVQCKDVQS*DVILAT
Trigger: AGTGGCAAGGATGACATCCAAGCTTTGGACATCTTT...GCACTGGACTTGGACCAGGGACACCATCAGGGCCTTGGTTTTCTCACGCATAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp CAGATCTCGGTGGCAGGTGGCTCTGCACAGTCCAGAGTGATAAAACAATCACAGGGGATGGGAAAGTGTTaGTACACGACGTCTTTCTCT +
Preference number: 5 (lower is better)
Translates to: QISVAGGSAQSRVIKQSQGMGKC*YTTSFS
Trigger: AGAGAAAGACGTCGTGTACAAACACTTTCCCATCCC...CTGTGATTGTTTTATCACTCTGGACTGTGCAGAGCCACCTGCCACCGAGATCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS TCA 90 bp AAACGACCCAGGTGCTCAATGAAGTTTTCCATATACATAACCAGGTaGCTCAGAGGTAGCAGACTAAACCAGGACCGGAAGAGAGGCTCG +
Preference number: 5 (lower is better)
Translates to: KRPRCSMKFSIYITR*LRGSRLNQDRKRGS
Trigger: CGAGCCTCTCTTCCGGTCCTGGTTTAGTCTGCTACCTCTGAGTCACCTGGTTATGTATATGGAAAACTTCATTGAGCACCTGGGTCGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319921.4
ENST00000508628.6
ENST00000559070.5
ENST00000582970.5
CDS TCA 90 bp ATTATCATTTCGTGCAGCTCTAGCAGGAAGGCGTCTAGGCCAGTCTaGTTTAGGAATGTGCTGAGGAGCTTAGCATTTTCCGGGCTCAGA +
Preference number: 5 (lower is better)
Translates to: IIISCSSSRKASRPV*FRNVLRSLAFSGLR
Trigger: TCTGAGCCCGGAAAATGCTAAGCTCCTCAGCACATTCCTAAATCAGACTGGCCTAGACGCCTTCCTGCTAGAGCTGCACGAAATGATAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000411702.7
ENST00000427003.7
ENST00000508628.6
ENST00000560083.1
ENST00000582970.5
CDS TCA 90 bp GAAGCAACACCATCTTGCCTGTTTCCATGCAGATCTTCACACGATTaGTGTTTCTGCAGAGCTGGGTGTACTCTTGGTCCTTGGGGAAAC +
Preference number: 5 (lower is better)
Translates to: EATPSCLFPCRSSHD*CFCRAGCTLGPWGN
Trigger: GTTTCCCCAAGGACCAAGAGTACACCCAGCTCTGCAGAAACATCAATCGTGTGAAGATCTGCATGGAAACAGGCAAGATGGTGTTGCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS GCA 90 bp AAGCCTCTGATGGAGCTGTATTCAACTTGCTGGACGTTCTGGAACTaGTTCACTAGATCCCTTTGCAAGGCCAAAATCTCAGGCAGGAAC +
Preference number: 5 (lower is better)
Translates to: KPLMELYSTCWTFWN*FTRSLCKAKISGRN
Trigger: GTTCCTGCCTGAGATTTTGGCCTTGCAAAGGGATCTAGTGAAGCAGTTCCAGAACGTCCAGCAAGTTGAATACAGCTCCATCAGAGGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000411702.7
ENST00000427003.7
ENST00000508628.6
ENST00000570776.1
ENST00000582970.5
CDS CCA 90 bp CGGAGCCACCTTTTCGTAGCAGCAAGGGTCCCTTGGAAGACTGTTTaGACTGAATTATTTCCAGTTTCATCTCTCTGTCCTGCAGAATCC +
Preference number: 5 (lower is better)
Translates to: RSHLFVAARVPWKTV*TELFPVSSLCPAES
Trigger: GGATTCTGCAGGACAGAGAGATGAAACTGGAAATAATTCAGTCCAAACAGTCTTCCAAGGGACCCTTGCTGCTACGAAAAGGTGGCTCCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319921.4
ENST00000508628.6
ENST00000559070.5
ENST00000582970.5
CDS CCA 90 bp ATGTCCTGGAGCAGCTTTTTGGCCTGGATGAGCTCCTGGTTGATCTaGTCCAGTGTTTCACGGCGAAAGTCGTCGAAGTTATCAGTAAAA +
Preference number: 5 (lower is better)
Translates to: MSWSSFLAWMSSWLI*SSVSRRKSSKLSVK
Trigger: TTTTACTGATAACTTCGACGACTTTCGCCGTGAAACACTGGACCAGATCAACCAGGAGCTCATCCAGGCCAAAAAGCTGCTCCAGGACAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000508628.6
ENST00000559070.5
ENST00000582970.5
CDS CCA 90 bp GCTGATGTTTTGATAGGTCAGAGTCAACACATCCAGCATCCATGCTaGCCTCCTTTTAGTAAACCTTCCTGTGCTCCAAAGGTCGGACAG +
Preference number: 5 (lower is better)
Translates to: ADVLIGQSQHIQHPC*PPFSKPSCAPKVGQ
Trigger: CTGTCCGACCTTTGGAGCACAGGAAGGTTTACTAAAAGGAGGCCAGCATGGATGCTGGATGTGTTGACTCTGACCTATCAAAACATCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559603.1
CDS CCA 90 bp GAGCAGGAACAAATCGGTTCCATGGACTTCCCGCTTCAGCAGGCATaGCCATGCATCAACATCATTCCTAAGAATCAAACCCACAAGATG +
Preference number: 5 (lower is better)
Translates to: EQEQIGSMDFPLQQA*PCINIIPKNQTHKM
Trigger: CATCTTGTGGGTTTGATTCTTAGGAATGATGTTGATGCATGGCCATGCCTGCTGAAGCGGGAAGTCCATGGAACCGATTTGTTCCTGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560083.1
ENST00000573919.1
CDS-3UTR CAA 90 bp TCAAGTCCACGCCGCAGACGAGGAGAGAGGAGTCTTCTCTCCAAAGTCATCCAAGCCATTGTGGAGTTATaGTTCTCAGAATCTGCTATG +
Preference number: 5 (lower is better)
Translates to: SSPRRRRGERSLLSKVIQAIVEL*FSESAM
Trigger: CATAGCAGATTCTGAGAACAATAACTCCACAATGGC...TTGGATGACTTTGGAGAGAAGACTCCTCTCTCCTCGTCTGCGGCGTGGACTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp ACCACAGAAAGGACTAGATATTCATACATGCGAGAGCACACTGAGACTGCATGTCCGAGGCCGACGCCATaGTGGAGTTATTGTTCTCAG +
Preference number: 5 (lower is better)
Translates to: TTERTRYSYMREHTETACPRPTP*WSYCSQ
Trigger: CTGAGAACAATAACTCCACAATGGCGTCGGCCTCGG...ACATGCAGTCTCAGTGTGCTCTCGCATGTATGAATATCTAGTCCTTTCTGTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp CACGCCGCAGACGAGGAGAGAGGAGTCTTCTCTCCAAAGTCATCCAAAGATAGCTTCCTTTTCTTCTTTTaGCTTTCTTGGACGGTCCAG +
Preference number: 5 (lower is better)
Translates to: HAADEERGVFSPKSSKDSFLFFF*LSWTVQ
Trigger: CTGGACCGTCCAAGAAAGCAAAAAGAAGAAAAGGAA...GCTATCTTTGGATGACTTTGGAGAGAAGACTCCTCTCTCCTCGTCTGCGGCGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR CAA 90 bp GTTCTAGACCACAGGTTTCTCGCCTGGAAGAACCTTTCCTTTTTGGAAGAGAAACCTGAGGCCACGGGTTaGAAAGCAAAGTCAGGTGAC +
Preference number: 5 (lower is better)
Translates to: VLDHRFLAWKNLSFLEEKPEATG*KAKSGD
Trigger: GTCACCTGACTTTGCTTTCAAACCCGTGGCCTCAGG...TTTCTCTTCCAAAAAGGAAAGGTTCTTCCAGGCGAGAAACCTGTGGTCTAGAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR CAA 90 bp TTTATGCGTGAGAAAACCAAGGCCCTGATGGTGTCCCTGGTCCAAGTCCAGTGCTTATCTAGGTGCTTCTaGGAAATGCAGACAATGCCT +
Preference number: 5 (lower is better)
Translates to: FMREKTKALMVSLVQVQCLSRCF*EMQTMP
Trigger: AGGCATTGTCTGCATTTCCAAGAAGCACCTAGATAA...GCACTGGACTTGGACCAGGGACACCATCAGGGCCTTGGTTTTCTCACGCATAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp ACTGCGTGTGTGGCTGAGCTACAAGTCTCCTGGAATGTAAACAATGTTGGTTTACTGCGTATTCAAGACTaGCTCAAGTCCCGGAAGCCG +
Preference number: 5 (lower is better)
Translates to: TACVAELQVSWNVNNVGLLRIQD*LKSRKP
Trigger: CGGCTTCCGGGACTTGAGCAAGTCTTGAATACGCAG...TAAACCAACATTGTTTACATTCCAGGAGACTTGTAGCTCAGCCACACACGCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp ACTGCGTGTGTGGCTGAGCTACAAGTCTCCTGGAATGTAAACAATGTTGGTTTAAAGCCGTCCCGAGGTTaGTGGTCAATGCCTCCAATC +
Preference number: 5 (lower is better)
Translates to: TACVAELQVSWNVNNVGLKPSRG*WSMPPI
Trigger: GATTGGAGGCATTGACCACAAACCTCGGGACGGCTT...TAAACCAACATTGTTTACATTCCAGGAGACTTGTAGCTCAGCCACACACGCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp AGAAACAGCTCGGCTTTCAAAAAGCTGTCAGCTCAGGTAGCACGCCTTGGTCTTAGCGATCTCCTCAGTTaGTTCCATGTGGACAGAAAG +
Preference number: 5 (lower is better)
Translates to: RNSSAFKKLSAQVARLGLSDLLS*FHVDRK
Trigger: CTTTCTGTCCACATGGAACAAACTGAGGAGATCGCT...AAGACCAAGGCGTGCTACCTGAGCTGACAGCTTTTTGAAAGCCGAGCTGTTTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp GCCAGCTCTGAGGTATCAAAGGAGCTCCGAGTGCAAGTTGAAGACTTCAGCAAGAGGGTGCAGTTGCTTTaGATGAAGGATAGCATCGTT +
Preference number: 5 (lower is better)
Translates to: ASSEVSKELRVQVEDFSKRVQLL*MKDSIV
Trigger: AACGATGCTATCCTTCATCAAAAGCAACTGCACCCT...CTTGCTGAAGTCTTCAACTTGCACTCGGAGCTCCTTTGATACCTCAGAGCTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp GATGAGAAAGTTTCAGAACATGTATGTACATGGTTCAGAAACAGCTCGGCTTTCTGGGCAGGGGCTGGCTaGGGGTTTGCATGTAGACAG +
Preference number: 5 (lower is better)
Translates to: DEKVSEHVCTWFRNSSAFWAGAG*GFACRQ
Trigger: CTGTCTACATGCAAACCCCAAGCCAGCCCCTGCCCA...GAAAGCCGAGCTGTTTCTGAACCATGTACATACATGTTCTGAAACTTTCTCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp ACTGCGTGTGTGGCTGAGCTACAAGTCTCCTGGAATGTAAACAATGTTGGTTTAGTCACCACGAACTTCTaGAAGCCCCTCAGTGTGTCG +
Preference number: 5 (lower is better)
Translates to: TACVAELQVSWNVNNVGLVTTNF*KPLSVS
Trigger: CGACACACTGAGGGGCTTCAAGAAGTTCGTGGTGAC...TAAACCAACATTGTTTACATTCCAGGAGACTTGTAGCTCAGCCACACACGCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp TCACAATTTCAAAATGTCAGATCAGAAGAATCTTTGGCGATTAATCCACTCTCCGTCTTGGCGAGAGACTaGGAGCTGCCGGGCTTCCCC +
Preference number: 5 (lower is better)
Translates to: SQFQNVRSEESLAINPLSVLARD*ELPGFP
Trigger: GGGGAAGCCCGGCAGCTCCAAGTCTCTCGCCAAGAC...GGAGAGTGGATTAATCGCCAAAGATTCTTCTGATCTGACATTTTGAAATTGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp ACCACAGAAAGGACTAGATATTCATACATGCGAGAGCACACTGAGACTGCATGTAGCCCGAAGAATTCCTaGTCCTGGCGCTTACACACC +
Preference number: 5 (lower is better)
Translates to: TTERTRYSYMREHTETACSPKNS*SWRLHT
Trigger: GGTGTGTAAGCGCCAGGACAAGGAATTCTTCGGGCT...ACATGCAGTCTCAGTGTGCTCTCGCATGTATGAATATCTAGTCCTTTCTGTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp CAGATCTCGGTGGCAGGTGGCTCTGCACAGTCCAGAGTGATAAAACAATCACAGTTCTCTCGAAGACACTaGTCTAGTAAGAAGACGTGC +
Preference number: 5 (lower is better)
Translates to: QISVAGGSAQSRVIKQSQFSRRH*SSKKTC
Trigger: GCACGTCTTCTTACTAGACAAGTGTCTTCGAGAGAA...CTGTGATTGTTTTATCACTCTGGACTGTGCAGAGCCACCTGCCACCGAGATCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp GCACGCCTTGGTCTTGAATTCGGTGCTACGCTGACAGCTCTCCTTCTGAATGCAAATGCTAATCATGGCTaGGATTGTTACTCAGCTCGA +
Preference number: 5 (lower is better)
Translates to: ARLGLEFGATLTALLLNANANHG*DCYSAR
Trigger: TCGAGCTGAGTAACAATCCAAGCCATGATTAGCATT...TGCATTCAGAAGGAGAGCTGTCAGCGTAGCACCGAATTCAAGACCAAGGCGTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR CAA 90 bp GGAATGCAGATCTCGGTGGCAGGTGGCTCTGCACAGTCCAGAGTGATAAAACAAGGTCTTACTTTGTGCTaGACCCATGCTTCTTCAAGA +
Preference number: 5 (lower is better)
Translates to: GMQISVAGGSAQSRVIKQGLTLC*THASSR
Trigger: TCTTGAAGAAGCATGGGTCAAGCACAAAGTAAGACC...TTGTTTTATCACTCTGGACTGTGCAGAGCCACCTGCCACCGAGATCTGCATTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS TCA 90 bp ATACAAATAGTCATACACCTCTTCAAGCTCAAGGATGTGCCTTTCTaGTTCTTCTTCGGGCTCACTCAGCAACTCTGCGGCTTCCTGGTC +
Preference number: 5 (lower is better)
Translates to: IQIVIHLFKLKDVPF*FFFGLTQQLCGFLV
Trigger: GACCAGGAAGCCGCAGAGTTGCTGAGTGAGCCCGAAGAAGAATCAGAAAGGCACATCCTTGAGCTTGAAGAGGTGTATGACTATTTGTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000508628.6
ENST00000559070.5
ENST00000582970.5
CDS TCA 90 bp ATCTCTGAGCTGATAATTCAGGAACCGAGCAAAGTTCCGAAGCTCTaGCCAGGATGGGTTTATTACCCCGCAGTGAAACAGGAAATGCTG +
Preference number: 5 (lower is better)
Translates to: ISELIIQEPSKVPKL*PGWVYYPAVKQEML
Trigger: CAGCATTTCCTGTTTCACTGCGGGGTAATAAACCCATCCTGGTCAGAGCTTCGGAACTTTGCTCGGTTCCTGAATTATCAGCTCAGAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS TCA 90 bp CCTAAGGACAGCCTGTGCAATGTCTTGCGGGGAAGGCTTTCTATTTaGAGCCTTTGCTGCAGCAAAGACCATTTTGATGAGGCTGTAGTA +
Preference number: 5 (lower is better)
Translates to: PKDSLCNVLRGRLSI*SLCCSKDHFDEAVV
Trigger: TACTACAGCCTCATCAAAATGGTCTTTGCTGCAGCAAAGGCTTCAAATAGAAAGCCTTCCCCGCAAGACATTGCACAGGCTGTCCTTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS GCA 90 bp AGGGCACTAGAACCACTTCTGGAGCAGTACCATTTTATGCACAAATaGCATCATGCAAATGAACACCTCCTTATCACCGGCAGACGTGAG +
Preference number: 5 (lower is better)
Translates to: RALEPLLEQYHFMHK*HHANEHLLITGRRE
Trigger: CTCACGTCTGCCGGTGATAAGGAGGTGTTCATTTGCATGATGGCATTTGTGCATAAAATGGTACTGCTCCAGAAGTGGTTCTAGTGCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572622.1
CDS CCA 90 bp TGGTATTCCTTGATCTGTTCGACTCGGTCCTTGATCCAATCTCTTTaGTCCTGGTGGTCCACGGTGCACATGATCTTAAGTTCTGAATCC +
Preference number: 5 (lower is better)
Translates to: WYSLICSTRSLIQSL*SWWSTVHMILSSES
Trigger: GGATTCAGAACTTAAGATCATGTGCACCGTGGACCACCAGGACCAAAGAGATTGGATCAAGGACCGAGTCGAACAGATCAAGGAATACCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000508628.6
ENST00000559070.5
ENST00000582970.5
CDS-3UTR CAA 90 bp GAAAGTTTCAGAACATGTATGTACATGGTTCAGAAACAGCTCGGCTTTCAAAAACGTGTGGTCCTGGAATaGCGGGCTGCTCTGAGCCTC +
Preference number: 5 (lower is better)
Translates to: ESFRTCMYMVQKQLGFQKRVVLE*RAALSL
Trigger: GAGGCTCAGAGCAGCCCGCAATTCCAGGACCACACG...TTTTTGAAAGCCGAGCTGTTTCTGAACCATGTACATACATGTTCTGAAACTTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp AGAATGAATATTAAGGATACTGCCTCTAACATATCAATAGCTGTGCTGAGCTGTCGTGTGGTCCTGGAATaGCGGGCTGCTCTGAGCCTC +
Preference number: 5 (lower is better)
Translates to: RMNIKDTASNISIAVLSCRVVLE*RAALSL
Trigger: GAGGCTCAGAGCAGCCCGCAATTCCAGGACCACACG...ACAGCTCAGCACAGCTATTGATATGTTAGAGGCAGTATCCTTAATATTCATTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp AGGACTAGATATTCATACATGCGAGAGCACACTGAGACTGCATGTTTATTTGGCGCCCCTTTAACTGCATaGGCTGGCTCAGCTACAGCA +
Preference number: 5 (lower is better)
Translates to: RTRYSYMREHTETACLFGAPLTA*AGSATA
Trigger: TGCTGTAGCTGAGCCAGCCAATGCAGTTAAAGGGGC...GCCAAATAAACATGCAGTCTCAGTGTGCTCTCGCATGTATGAATATCTAGTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp GAGTCCTGGACAAGCATTTTGTATTTTTGTAGTTCTCACTCCTTAGGCCCAATTGCAGCCATCTCGTCCTaGGTCTTGGTCTCAGCTTCC +
Preference number: 5 (lower is better)
Translates to: ESWTSILYFCSSHSLGPIAAISS*VLVSAS
Trigger: GGAAGCTGAGACCAAGACCAAGGACGAGATGGCTGC...AATTGGGCCTAAGGAGTGAGAACTACAAAAATACAAAATGCTTGTCCAGGACTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp GGAATGCAGATCTCGGTGGCAGGTGGCTCTGCACAGTCCAGAGTGATAAAACAATATTGCTGTCCCATTTaGACTCCCCAAATTCTTCTC +
Preference number: 5 (lower is better)
Translates to: GMQISVAGGSAQSRVIKQYCCPI*TPQILL
Trigger: GAGAAGAATTTGGGGAGTCAAAATGGGACAGCAATA...TTGTTTTATCACTCTGGACTGTGCAGAGCCACCTGCCACCGAGATCTGCATTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp GCCAGCTCTGAGGTATCAAAGGAGCTCCGAGTGCAAGTTGAAGACTTCAGCAAGTATTGCTGTCCCATTTaGACTCCCCAAATTCTTCTC +
Preference number: 5 (lower is better)
Translates to: ASSEVSKELRVQVEDFSKYCCPI*TPQILL
Trigger: GAGAAGAATTTGGGGAGTCAAAATGGGACAGCAATA...CTTGCTGAAGTCTTCAACTTGCACTCGGAGCTCCTTTGATACCTCAGAGCTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp ACCACAGAAAGGACTAGATATTCATACATGCGAGAGCACACTGAGACTGCATGTATGAACAGACAGCGGTaGACGTACTCGCCCTTCTTC +
Preference number: 5 (lower is better)
Translates to: TTERTRYSYMREHTETACMNRQR*TYSPFF
Trigger: GAAGAAGGGCGAGTACGTCAACCGCTGTCTGTTCAT...ACATGCAGTCTCAGTGTGCTCTCGCATGTATGAATATCTAGTCCTTTCTGTGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp ATTAATAGTTGTGTCAGCATCTTTCTTAGACTGTTTTCCAGCAGGGTCTCAAAGCGCAGCCCCTGCTGCTaGACAACGTCCTTGGGAAAC +
Preference number: 5 (lower is better)
Translates to: INSCVSIFLRLFSSRVSKRSPCC*TTSLGN
Trigger: GTTTCCCAAGGACGTTGTCAAGCAGCAGGGGCTGCG...CTTTGAGACCCTGCTGGAAAACAGTCTAAGAAAGATGCTGACACAACTATTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000573038.1
CDS-3UTR CAA 90 bp TCGGCTTTCAAAAAGCTGTCAGCTCAGGTAGCACGCCTTGGTCTTGAATTCGGTCGTCTGATCACCCATTaGCAGGATGTCTTGAGTATA +
Preference number: 5 (lower is better)
Translates to: SAFKKLSAQVARLGLEFGRLITH*QDVLSI
Trigger: TATACTCAAGACATCCTGCAAATGGGTGATCAGACG...ACCGAATTCAAGACCAAGGCGTGCTACCTGAGCTGACAGCTTTTTGAAAGCCGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp GCCAGCTCTGAGGTATCAAAGGAGCTCCGAGTGCAAGTTGAAGACTTCAGCAAGTTCCTTTTCTTCTTTTaGCTCTGCTCACAGTCTGCA +
Preference number: 5 (lower is better)
Translates to: ASSEVSKELRVQVEDFSKFLFFF*LCSQSA
Trigger: TGCAGACTGTGAGCAGAGCAAAAAGAAGAAAAGGAA...CTTGCTGAAGTCTTCAACTTGCACTCGGAGCTCCTTTGATACCTCAGAGCTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508628.6
CDS-3UTR CAA 90 bp GCCAGCTCTGAGGTATCAAAGGAGCTCCGAGTGCAAGTTGAAGACTTCAGCAAGCACTCCAAAGTCCACTaGTATCAGATGTTTCACGTT +
Preference number: 5 (lower is better)
Translates to: ASSEVSKELRVQVEDFSKHSKVH*YQMFHV
Trigger: AACGTGAAACATCTGATACAAGTGGACTTTGGAGTG...CTTGCTGAAGTCTTCAACTTGCACTCGGAGCTCCTTTGATACCTCAGAGCTGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp AGGACTAGATATTCATACATGCGAGAGCACACTGAGACTGCATGTTTATTTGGCTGCTGCGTGCACAGATaGTGGAAAAGCTCCTCCGCT +
Preference number: 5 (lower is better)
Translates to: RTRYSYMREHTETACLFGCCVHR*WKSSSA
Trigger: AGCGGAGGAGCTTTTCCACAATCTGTGCACGCAGCA...GCCAAATAAACATGCAGTCTCAGTGTGCTCTCGCATGTATGAATATCTAGTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp TTTATGCGTGAGAAAACCAAGGCCCTGATGGTGTCCCTGGTCCAAGTCCAGTGCAGGATTTTAAGCATATaGTCGGTTGTGAGCTCATAC +
Preference number: 5 (lower is better)
Translates to: FMREKTKALMVSLVQVQCRILSI*SVVSSY
Trigger: GTATGAGCTCACAACCGACAATATGCTTAAAATCCT...GCACTGGACTTGGACCAGGGACACCATCAGGGCCTTGGTTTTCTCACGCATAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp GGAATGCAGATCTCGGTGGCAGGTGGCTCTGCACAGTCCAGAGTGATAAAACAATCACACAGGACTTCTTaGATACAGCTTATAGCTTCC +
Preference number: 5 (lower is better)
Translates to: GMQISVAGGSAQSRVIKQSHRTS*IQLIAS
Trigger: GGAAGCTATAAGCTGTATCAAAGAAGTCCTGTGTGA...TTGTTTTATCACTCTGGACTGTGCAGAGCCACCTGCCACCGAGATCTGCATTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp AGAAACAGCTCGGCTTTCAAAAAGCTGTCAGCTCAGGTAGCACGCCTTGGTCTTAAAGATGTCCAAAGCTaGGATGTCATCCTTGCCACT +
Preference number: 5 (lower is better)
Translates to: RNSSAFKKLSAQVARLGLKDVQS*DVILAT
Trigger: AGTGGCAAGGATGACATCCAAGCTTTGGACATCTTT...AAGACCAAGGCGTGCTACCTGAGCTGACAGCTTTTTGAAAGCCGAGCTGTTTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp GTTCTAGACCACAGGTTTCTCGCCTGGAAGAACCTTTCCTTTTTGGAAGAGAAATTCAGCAGGATCGATTaGGCCTCCTCAGACACCTTC +
Preference number: 5 (lower is better)
Translates to: VLDHRFLAWKNLSFLEEKFSRID*ASSDTF
Trigger: GAAGGTGTCTGAGGAGGCCAAATCGATCCTGCTGAA...TTTCTCTTCCAAAAAGGAAAGGTTCTTCCAGGCGAGAAACCTGTGGTCTAGAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR CAA 90 bp TCACAATTTCAAAATGTCAGATCAGAAGAATCTTTGGCGATTAATCCACTCTCCCAGGCTCCCGCTGCCTaGCATGTGCTCATCGGAGCA +
Preference number: 5 (lower is better)
Translates to: SQFQNVRSEESLAINPLSQAPAA*HVLIGA
Trigger: TGCTCCGATGAGCACATGCAAGGCAGCGGGAGCCTG...GGAGAGTGGATTAATCGCCAAAGATTCTTCTGATCTGACATTTTGAAATTGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp GCCAGCTCTGAGGTATCAAAGGAGCTCCGAGTGCAAGTTGAAGACTTCAGCAAGATGGAGAGAGAGATTTaGTGTGTTCACAGTGTCTCT +
Preference number: 5 (lower is better)
Translates to: ASSEVSKELRVQVEDFSKMEREI*CVHSVS
Trigger: AGAGACACTGTGAACACACAAAATCTCTCTCTCCAT...CTTGCTGAAGTCTTCAACTTGCACTCGGAGCTCCTTTGATACCTCAGAGCTGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp TCAGCTCCACTGTGGAGTCGCCAGGATGCTGTCATTTTGTCCAGAGGAAAAGTCATGGAGAGAGAGATTTaGTGTGTTCACAGTGTCTCT +
Preference number: 5 (lower is better)
Translates to: SAPLWSRQDAVILSRGKVMEREI*CVHSVS
Trigger: AGAGACACTGTGAACACACAAAATCTCTCTCTCCAT...GACTTTTCCTCTGGACAAAATGACAGCATCCTGGCGACTCCACAGTGGAGCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS TCA 90 bp ACTTGTGTCCCAGGCTTGCGACCTAAACTTTCATTGTCTAGGATGTaGGAAGCGTCAGCGAGATGTGTCCTTAACATCTCTGAATTCAGC +
Preference number: 5 (lower is better)
Translates to: TCVPGLRPKLSLSRM*EASARCVLNISEFS
Trigger: GCTGAATTCAGAGATGTTAAGGACACATCTCGCTGACGCTTCTCACATCCTAGACAATGAAAGTTTAGGTCGCAAGCCTGGGACACAAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558488.1
CDS GCA 90 bp TCTCTTCACCTCTTTCTCCCTGTACTGCAAATCGGTCCACAGCTGTaGCTGTCCTTCATAAATCATAGGCTGTTGCAGGACAAAGCAAAA +
Preference number: 5 (lower is better)
Translates to: SLHLFLPVLQIGPQL*LSFINHRLLQDKAK
Trigger: TTTTGCTTTGTCCTGCAACAGCCTATGATTTATGAAGGACAGGCACAGCTGTGGACCGATTTGCAGTACAGGGAGAAAGAGGTGAAGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319921.4
ENST00000508628.6
ENST00000559070.5
ENST00000582970.5
CDS GCA 90 bp GGCAGAAAGCCCCGTGCACAGGATCAGGTTTATCGGGATCACCTGTaGCATTTTGTTCTTGATGTCCATAAAGAGATGTTCATAGTTCCA +
Preference number: 5 (lower is better)
Translates to: GRKPRAQDQVYRDHL*HFVLDVHKEMFIVP
Trigger: TGGAACTATGAACATCTCTTTATGGACATCAAGAACAAAATGGCACAGGTGATCCCGATAAACCTGATCCTGTGCACGGGGCTTTCTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000560083.1
ENST00000573919.1
CDS GCA 90 bp TCAATCTGCTTTTACTCTACAAGAAAACTTGCTGATTTGCTGTCTTaGTTGCTCTCTGTAAGGGAGGCCGCAGAAACTGTGGGCTCACAG +
Preference number: 5 (lower is better)
Translates to: SICFYSTRKLADLLS*LLSVREAAETVGSQ
Trigger: CTGTGAGCCCACAGTTTCTGCGGCCTCCCTTACAGAGAGCAAGCAAGACAGCAAATCAGCAAGTTTTCTTGTAGAGTAAAAGCAGATTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000560083.1
ENST00000573919.1
CDS CCA 90 bp TTCTTCTCCTCCTCTGATGAAGACTTTATGGAGGTCAGGATTGAATaGGAAATGAAGAGAGATGATGGCGTGGAAGAACACGGTGACTCC +
Preference number: 5 (lower is better)
Translates to: FFSSSDEDFMEVRIE*EMKRDDGVEEHGDS
Trigger: GGAGTCACCGTGTTCTTCCACGCCATCATCTCTCTTCATTTCCCATTCAATCCTGACCTCCATAAAGTCTTCATCAGAGGAGGAGAAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319921.4
ENST00000508628.6
ENST00000559070.5
ENST00000573548.1
ENST00000582970.5
CDS-3UTR CAA 90 bp GAGTCCTGGACAAGCATTTTGTATTTTTGTAGTTCTCACTCCTTAGGCCCAATTTTGGGGGTTTCCTCCTaGGAGACATGCTGGCACGAA +
Preference number: 5 (lower is better)
Translates to: ESWTSILYFCSSHSLGPILGVSS*ETCWHE
Trigger: TTCGTGCCAGCATGTCTCCAAGGAGGAAACCCCCAA...AATTGGGCCTAAGGAGTGAGAACTACAAAAATACAAAATGCTTGTCCAGGACTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp ACCACAGAAAGGACTAGATATTCATACATGCGAGAGCACACTGAGACTGCATGTTGTGTCCATGCATCTTaGGCACAGGTTCACCAGGTA +
Preference number: 5 (lower is better)
Translates to: TTERTRYSYMREHTETACCVHAS*AQVHQV
Trigger: TACCTGGTGAACCTGTGCCAAAGATGCATGGACACA...ACATGCAGTCTCAGTGTGCTCTCGCATGTATGAATATCTAGTCCTTTCTGTGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp GAGTCCTGGACAAGCATTTTGTATTTTTGTAGTTCTCACTCCTTAGGCCCAATTGCCAGGTGTACGTCCTaGTGTCCATGCATCTTTGGC +
Preference number: 5 (lower is better)
Translates to: ESWTSILYFCSSHSLGPIARCTS*CPCIFG
Trigger: GCCAAAGATGCATGGACACAAGGACGTACACCTGGC...AATTGGGCCTAAGGAGTGAGAACTACAAAAATACAAAATGCTTGTCCAGGACTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp GGCATACGAACAATATCTCAACAAAGAGTTAACGAAAAAGGGAAAGGAAAACCTATGCTCCGCGGGGAATaGGATTTCCACCAGCCGCCT +
Preference number: 5 (lower is better)
Translates to: GIRTISQQRVNEKGKGKPMLRGE*DFHQPP
Trigger: AGGCGGCTGGTGGAAATCCAATTCCCCGCGGAGCAT...AGGTTTTCCTTTCCCTTTTTCGTTAACTCTTTGTTGAGATATTGTTCGTATGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000319921.4
CDS-3UTR CAA 90 bp GAGTCCTGGACAAGCATTTTGTATTTTTGTAGTTCTCACTCCTTAGGCCCAATTGCATCACGGAGAGCCTaGTATTCATCGCCGTACACC +
Preference number: 5 (lower is better)
Translates to: ESWTSILYFCSSHSLGPIASRRA*YSSPYT
Trigger: GGTGTACGGCGATGAATACAAGGCTCTCCGTGATGC...AATTGGGCCTAAGGAGTGAGAACTACAAAAATACAAAATGCTTGTCCAGGACTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp AGAATGAATATTAAGGATACTGCCTCTAACATATCAATAGCTGTGCTGAGCTGTCTGTGTCCCAGCATCTaGGCCAACTGCTCCAGGTCC +
Preference number: 5 (lower is better)
Translates to: RMNIKDTASNISIAVLSCLCPSI*ANCSRS
Trigger: GGACCTGGAGCAGTTGGCCAAGATGCTGGGACACAG...ACAGCTCAGCACAGCTATTGATATGTTAGAGGCAGTATCCTTAATATTCATTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp CACGCCGCAGACGAGGAGAGAGGAGTCTTCTCTCCAAAGTCATCCAAAGATAGCTGTGCCATTTTGTTCTaGATGTCCATAAAGAGATGT +
Preference number: 5 (lower is better)
Translates to: HAADEERGVFSPKSSKDSCAILF*MSIKRC
Trigger: ACATCTCTTTATGGACATCAAGAACAAAATGGCACA...GCTATCTTTGGATGACTTTGGAGAGAAGACTCCTCTCTCCTCGTCTGCGGCGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp TCGGCTTTCAAAAAGCTGTCAGCTCAGGTAGCACGCCTTGGTCTTGAATTCGGTCATTTGCAGGATGTCTaGAGTATACACATTCAGCTG +
Preference number: 5 (lower is better)
Translates to: SAFKKLSAQVARLGLEFGHLQDV*SIHIQL
Trigger: CAGCTGAATGTGTATACTCAAGACATCCTGCAAATG...ACCGAATTCAAGACCAAGGCGTGCTACCTGAGCTGACAGCTTTTTGAAAGCCGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp AGGACTAGATATTCATACATGCGAGAGCACACTGAGACTGCATGTTTATTTGGCCTTGATCCAATCTCTTaGGTCCTGGTGGTCCACGGT +
Preference number: 5 (lower is better)
Translates to: RTRYSYMREHTETACLFGLDPIS*VLVVHG
Trigger: ACCGTGGACCACCAGGACCAAAGAGATTGGATCAAG...GCCAAATAAACATGCAGTCTCAGTGTGCTCTCGCATGTATGAATATCTAGTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp AGGACTAGATATTCATACATGCGAGAGCACACTGAGACTGCATGTTTATTTGGCAGTCCCAGGCTCTCTTaGACCTGCAAGATGACCTTG +
Preference number: 5 (lower is better)
Translates to: RTRYSYMREHTETACLFGSPRLS*TCKMTL
Trigger: CAAGGTCATCTTGCAGGTCAAAGAGAGCCTGGGACT...GCCAAATAAACATGCAGTCTCAGTGTGCTCTCGCATGTATGAATATCTAGTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp GAAAGTTTCAGAACATGTATGTACATGGTTCAGAAACAGCTCGGCTTTCAAAAAGGGGTGACGAAGACCTaGTGCTGGCTGAAGGCAGAG +
Preference number: 5 (lower is better)
Translates to: ESFRTCMYMVQKQLGFQKGVTKT*CWLKAE
Trigger: CTCTGCCTTCAGCCAGCACAAGGTCTTCGTCACCCC...TTTTTGAAAGCCGAGCTGTTTCTGAACCATGTACATACATGTTCTGAAACTTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp ACCACAGAAAGGACTAGATATTCATACATGCGAGAGCACACTGAGACTGCATGTGTCATGACGTCTCTCTaGATGACCTTCCCAGTCAAG +
Preference number: 5 (lower is better)
Translates to: TTERTRYSYMREHTETACVMTSL*MTFPVK
Trigger: CTTGACTGGGAAGGTCATCAAGAGAGACGTCATGAC...ACATGCAGTCTCAGTGTGCTCTCGCATGTATGAATATCTAGTCCTTTCTGTGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp TTCCAAAGACCAGTCTTACCAAGTTTCAGATGTCTGGACTCCAAGTGGCAGTTCGTCAGTAACTCTAGGTaGCCGTCTCTGTCGATGAAT +
Preference number: 5 (lower is better)
Translates to: FQRPVLPSFRCLDSKWQFVSNSR*PSLSMN
Trigger: ATTCATCGACAGAGACGGCAACCTAGAGTTACTGAC...GAACTGCCACTTGGAGTCCAGACATCTGAAACTTGGTAAGACTGGTCTTTGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR CAA 90 bp TCAAGTCCACGCCGCAGACGAGGAGAGAGGAGTCTTCTCTCCAAAGTCATCCAAGTTTCTAAATTGGAATaGCCTGAACATACAGGAGTA +
Preference number: 5 (lower is better)
Translates to: SSPRRRRGERSLLSKVIQVSKLE*PEHTGV
Trigger: TACTCCTGTATGTTCAGGCAATTCCAATTTAGAAAC...TTGGATGACTTTGGAGAGAAGACTCCTCTCTCCTCGTCTGCGGCGTGGACTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS TCA 90 bp AGAATTGTCCACGAGCGATGTTGCAAAACGGCTGATATCAGGAGGTaGAAGGATCTTGCATTCGCCAATGAATTTGCTCACAGCTTCACA +
Preference number: 5 (lower is better)
Translates to: RIVHERCCKTADIRR*KDLAFANEFAHSFT
Trigger: TGTGAAGCTGTGAGCAAATTCATTGGCGAATGCAAGATCCTTTCACCTCCTGATATCAGCCGTTTTGCAACATCGCTCGTGGACAATTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000411702.7
ENST00000508628.6
ENST00000558116.5
ENST00000559864.1
ENST00000582970.5
CDS TCA 90 bp AGGTGGACAGTCTCACTGTCACGGTGTCATTTAATCTTTTACTGCTaGGGTCTTGTGAGTGTCTTACTGCAAGCACTCCAAAGTCCACTT +
Preference number: 5 (lower is better)
Translates to: RWTVSLSRCHLIFYC*GLVSVLLQALQSPL
Trigger: AAGTGGACTTTGGAGTGCTTGCAGTAAGACACTCACAAGACCTCAGCAGTAAAAGATTAAATGACACCGTGACAGTGAGACTGTCCACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000508628.6
ENST00000559070.5
ENST00000582970.5
CDS TCA 90 bp GAAACTTTAATTCCTCCTCCGTTGACACACGCATGGTCAAGAGAATaGAATCCTTCAAGTAACACTGAAGAAGTTCCTGCTGCGGCTCTC +
Preference number: 5 (lower is better)
Translates to: ETLIPPPLTHAWSRE*NPSSNTEEVPAAAL
Trigger: GAGAGCCGCAGCAGGAACTTCTTCAGTGTTACTTGAAGGATTTCATTCTCTTGACCATGCGTGTGTCAACGGAGGAGGAATTAAAGTTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000508628.6
ENST00000558116.5
ENST00000582970.5
CDS TCA 90 bp GATGTGTCCTTAACATCTCTGAATTCAGCTAAGGTATGTGCCTTGTaGAGAAATCTCCCACTTGGAACACAGCCCCAGAAGCTCTCCATT +
Preference number: 5 (lower is better)
Translates to: DVSLTSLNSAKVCAL*RNLPLGTQPQKLSI
Trigger: AATGGAGAGCTTCTGGGGCTGTGTTCCAAGTGGGAGATTTCTTCACAAGGCACATACCTTAGCTGAATTCAGAGATGTTAAGGACACATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558488.1
CDS GCA 90 bp TTCAGAGGCACATTTTTCACGTTTAACTGCATCTTCATTTTGTCGTaGAACCTCTTCACGTACAGAGACTTTCCAACACCTGCTCGCTCC +
Preference number: 5 (lower is better)
Translates to: FRGTFFTFNCIFILS*NLFTYRDFPTPARS
Trigger: GGAGCGAGCAGGTGTTGGAAAGTCTCTGTACGTGAAGAGGTTGCACGACAAAATGAAGATGCAGTTAAACGTGAAAAATGTGCCTCTGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS GCA 90 bp GTGTACAAACCTACCACACAGGTGTGCCACCATTTCCACAGTCACTaGCCTAACGTTGCTAAGCAATGCTCTATTCAACAAAATCTGCAT +
Preference number: 5 (lower is better)
Translates to: VYKPTTQVCHHFHSH*PNVAKQCSIQQNLH
Trigger: ATGCAGATTTTGTTGAATAGAGCATTGCTTAGCAACGTTAGGGCAGTGACTGTGGAAATGGTGGCACACCTGTGTGGTAGGTTTGTACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559070.5
CDS CCA 90 bp GACGGCACTGACGTCCTCCTTTCCAGGATTTCAACGATATACAAATaGCAGGGGTTCCGAAGCCACATTTTCCCATTTATATCCATTAAG +
Preference number: 5 (lower is better)
Translates to: DGTDVLLSRISTIYK*QGFRSHIFPFISIK
Trigger: CTTAATGGATATAAATGGGAAAATGTGGCTTCGGAACCCCTGCCATTTGTATATCGTTGAAATCCTGGAAAGGAGGACGTCAGTGCCGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp ACTGCGTGTGTGGCTGAGCTACAAGTCTCCTGGAATGTAAACAATGTTGGTTTAGGGTGGAGGCTTGCATaGTGGGATCTGTACAAAATA +
Preference number: 5 (lower is better)
Translates to: TACVAELQVSWNVNNVGLGWRLA*WDLYKI
Trigger: TATTTTGTACAGATCCCACAATGCAAGCCTCCACCC...TAAACCAACATTGTTTACATTCCAGGAGACTTGTAGCTCAGCCACACACGCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp GCCAGCTCTGAGGTATCAAAGGAGCTCCGAGTGCAAGTTGAAGACTTCAGCAAGTCAGATCTTGTTAGTTaGATCTTAAGGCACTCACAA +
Preference number: 5 (lower is better)
Translates to: ASSEVSKELRVQVEDFSKSDLVS*ILRHSQ
Trigger: TTGTGAGTGCCTTAAGATCAAACTAACAAGATCTGA...CTTGCTGAAGTCTTCAACTTGCACTCGGAGCTCCTTTGATACCTCAGAGCTGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp GATGAGAAAGTTTCAGAACATGTATGTACATGGTTCAGAAACAGCTCGGCTTTCCTTGATCCAATCTCTTaGGTCCTGGTGGTCCACGGT +
Preference number: 5 (lower is better)
Translates to: DEKVSEHVCTWFRNSSAFLDPIS*VLVVHG
Trigger: ACCGTGGACCACCAGGACCAAAGAGATTGGATCAAG...GAAAGCCGAGCTGTTTCTGAACCATGTACATACATGTTCTGAAACTTTCTCATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp ACCACAGAAAGGACTAGATATTCATACATGCGAGAGCACACTGAGACTGCATGTTGCTTCCGGTATGGATaGCAGGCAGCTATAATATGC +
Preference number: 5 (lower is better)
Translates to: TTERTRYSYMREHTETACCFRYG*QAAIIC
Trigger: GCATATTATAGCTGCCTGCAATCCATACCGGAAGCA...ACATGCAGTCTCAGTGTGCTCTCGCATGTATGAATATCTAGTCCTTTCTGTGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp AGAATGAATATTAAGGATACTGCCTCTAACATATCAATAGCTGTGCTGAGCTGTTCTGCCACGATGGTCTaGGCGAGAGACTTGGAGCTG +
Preference number: 5 (lower is better)
Translates to: RMNIKDTASNISIAVLSCSATMV*ARDLEL
Trigger: CAGCTCCAAGTCTCTCGCCAAGACCATCGTGGCAGA...ACAGCTCAGCACAGCTATTGATATGTTAGAGGCAGTATCCTTAATATTCATTCT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp GAAAGTTTCAGAACATGTATGTACATGGTTCAGAAACAGCTCGGCTTTCAAAAAACTTCCTCTGAGCACTaGGCCTCGGGCAAATTGGCC +
Preference number: 5 (lower is better)
Translates to: ESFRTCMYMVQKQLGFQKTSSEH*ASGKLA
Trigger: GGCCAATTTGCCCGAGGCCAAGTGCTCAGAGGAAGT...TTTTTGAAAGCCGAGCTGTTTCTGAACCATGTACATACATGTTCTGAAACTTTC
46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp ACCACAGAAAGGACTAGATATTCATACATGCGAGAGCACACTGAGACTGCATGTCAGATCTTCACACGATaGATGTTTCTGCAGAGCTGG +
Preference number: 5 (lower is better)
Translates to: TTERTRYSYMREHTETACQIFTR*MFLQSW
Trigger: CCAGCTCTGCAGAAACATCAATCGTGTGAAGATCTG...ACATGCAGTCTCAGTGTGCTCTCGCATGTATGAATATCTAGTCCTTTCTGTGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp GTTCTAGACCACAGGTTTCTCGCCTGGAAGAACCTTTCCTTTTTGGAAGAGAAAAGAAGCAACACCATCTaGCCTGTTTCCATGCAGATC +
Preference number: 5 (lower is better)
Translates to: VLDHRFLAWKNLSFLEEKRSNTI*PVSMQI
Trigger: GATCTGCATGGAAACAGGCAAGATGGTGTTGCTTCT...TTTCTCTTCCAAAAAGGAAAGGTTCTTCCAGGCGAGAAACCTGTGGTCTAGAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR CAA 90 bp ACTGCGTGTGTGGCTGAGCTACAAGTCTCCTGGAATGTAAACAATGTTGGTTTATTTCACAGTCGTGACTaGTTAGCAGCCTGGAGAAAG +
Preference number: 5 (lower is better)
Translates to: TACVAELQVSWNVNNVGLFHSRD*LAAWRK
Trigger: CTTTCTCCAGGCTGCTAACAAGTCACGACTGTGAAA...TAAACCAACATTGTTTACATTCCAGGAGACTTGTAGCTCAGCCACACACGCAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp GAGTCCTGGACAAGCATTTTGTATTTTTGTAGTTCTCACTCCTTAGGCCCAATTCTGAAAGGGACGTTGTaGGAAGCGTTCTCGGAAAGG +
Preference number: 5 (lower is better)
Translates to: ESWTSILYFCSSHSLGPILKGTL*EAFSER
Trigger: CCTTTCCGAGAACGCTTCCAACAACGTCCCTTTCAG...AATTGGGCCTAAGGAGTGAGAACTACAAAAATACAAAATGCTTGTCCAGGACTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp GAAAGTTTCAGAACATGTATGTACATGGTTCAGAAACAGCTCGGCTTTCAAAAAGGCGGAGCGTTGTCCTaGAAGCAAATGGTGGACACC +
Preference number: 5 (lower is better)
Translates to: ESFRTCMYMVQKQLGFQKGGALS*KQMVDT
Trigger: GGTGTCCACCATTTGCTTCAAGGACAACGCTCCGCC...TTTTTGAAAGCCGAGCTGTTTCTGAACCATGTACATACATGTTCTGAAACTTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp GTTCTAGACCACAGGTTTCTCGCCTGGAAGAACCTTTCCTTTTTGGAAGAGAAAAGGGTGAAGGAGCCCTaGGATTTGGTAATTAGGAGT +
Preference number: 5 (lower is better)
Translates to: VLDHRFLAWKNLSFLEEKRVKEP*DLVIRS
Trigger: ACTCCTAATTACCAAATCCAAGGGCTCCTTCACCCT...TTTCTCTTCCAAAAAGGAAAGGTTCTTCCAGGCGAGAAACCTGTGGTCTAGAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR CAA 90 bp TGCTGGCCAGTCTATCTTACACAAAGTTTTAAGTTTTCCTGGTGTCATAGTACTGGCTGTGTGTCAGCTTaGTTGGGTTCCAGAGTGGTC +
Preference number: 5 (lower is better)
Translates to: CWPVYLTQSFKFSWCHSTGCVSA*LGSRVV
Trigger: GACCACTCTGGAACCCAACAAAGCTGACACACAGCC...AGTACTATGACACCAGGAAAACTTAAAACTTTGTGTAAGATAGACTGGCCAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR CAA 90 bp GAGTCCTGGACAAGCATTTTGTATTTTTGTAGTTCTCACTCCTTAGGCCCAATTTCTGCTGGTCTTTCCTaGCCTCTGCCAGCCACTTAT +
Preference number: 5 (lower is better)
Translates to: ESWTSILYFCSSHSLGPISAGLS*PLPATY
Trigger: ATAAGTGGCTGGCAGAGGCAAGGAAAGACCAGCAGA...AATTGGGCCTAAGGAGTGAGAACTACAAAAATACAAAATGCTTGTCCAGGACTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS TCA 90 bp TTCCACACTGAGACACAGCTGGCGAGCAGTATCTCTTCTGGGAACTaGGATGCCATTTCAGGAAGAATTTCACTTTCTTTAGTTTGCATG +
Preference number: 5 (lower is better)
Translates to: FHTETQLASSISSGN*DAISGRISLSLVCM
Trigger: CATGCAAACTAAAGAAAGTGAAATTCTTCCTGAAATGGCATCTCAGTTCCCAGAAGAGATACTGCTCGCCAGCTGTGTCTCAGTGTGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000411702.7
ENST00000427003.7
ENST00000508628.6
ENST00000560083.1
ENST00000582970.5
CDS TCA 90 bp ATCTCTTTGGTCCTGGTGGTCCACGGTGCACATGATCTTAAGTTCTaGATCCAGGTCCGTGTATTTATTCACAAAGTCCTTGAAGATGAC +
Preference number: 5 (lower is better)
Translates to: ISLVLVVHGAHDLKF*IQVRVFIHKVLEDD
Trigger: GTCATCTTCAAGGACTTTGTGAATAAATACACGGACCTGGATTCAGAACTTAAGATCATGTGCACCGTGGACCACCAGGACCAAAGAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000508628.6
ENST00000559070.5
ENST00000582970.5
CDS TCA 90 bp AACCCACAAGATGTCAATCTGCTTTTACTCTACAAGAAAACTTGCTaGTTTGCTGTCTTGCTTGCTCTCTGTAAGGGAGGCCGCAGAAAC +
Preference number: 5 (lower is better)
Translates to: NPQDVNLLLLYKKTC*FAVLLALCKGGRRN
Trigger: GTTTCTGCGGCCTCCCTTACAGAGAGCAAGCAAGACAGCAAATCAGCAAGTTTTCTTGTAGAGTAAAAGCAGATTGACATCTTGTGGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000560083.1
ENST00000573919.1
CDS GCA 90 bp GTCACTGCCCTAACGTTGCTAAGCAATGCTCTATTCAACAAAATCTaGATTAGAGACAGAATAAGACTCACCAGTTTCCTGGGCAGGTAC +
Preference number: 5 (lower is better)
Translates to: VTALTLLSNALFNKI*IRDRIRLTSFLGRY
Trigger: GTACCTGCCCAGGAAACTGGTGAGTCTTATTCTGTCTCTAATGCAGATTTTGTTGAATAGAGCATTGCTTAGCAACGTTAGGGCAGTGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559070.5
CDS CCA 90 bp GTAAAAACTTCTCGGAGCCACCTTTTCGTAGCAGCAAGGGTCCCTTaGAAGACTGTTTGGACTGAATTATTTCCAGTTTCATCTCTCTGT +
Preference number: 5 (lower is better)
Translates to: VKTSRSHLFVAARVP*KTVWTELFPVSSLC
Trigger: ACAGAGAGATGAAACTGGAAATAATTCAGTCCAAACAGTCTTCCAAGGGACCCTTGCTGCTACGAAAAGGTGGCTCCGAGAAGTTTTTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000319921.4
ENST00000508628.6
ENST00000559070.5
ENST00000582970.5
CDS-3UTR CAA 90 bp GGCATACGAACAATATCTCAACAAAGAGTTAACGAAAAAGGGAAAGGAAAACCTTTGGGGGTTTCCTCCTaGGAGACATGCTGGCACGAA +
Preference number: 5 (lower is better)
Translates to: GIRTISQQRVNEKGKGKPLGVSS*ETCWHE
Trigger: TTCGTGCCAGCATGTCTCCAAGGAGGAAACCCCCAA...AGGTTTTCCTTTCCCTTTTTCGTTAACTCTTTGTTGAGATATTGTTCGTATGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000319921.4
CDS-3UTR CAA 90 bp AGGACTAGATATTCATACATGCGAGAGCACACTGAGACTGCATGTTTATTTGGCCTTCTTTTTGCTTTCTaGGACGGTCCAGGAGGCTTT +
Preference number: 5 (lower is better)
Translates to: RTRYSYMREHTETACLFGLLFAF*DGPGGF
Trigger: AAAGCCTCCTGGACCGTCCAAGAAAGCAAAAAGAAG...GCCAAATAAACATGCAGTCTCAGTGTGCTCTCGCATGTATGAATATCTAGTCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR CAA 90 bp GGCATACGAACAATATCTCAACAAAGAGTTAACGAAAAAGGGAAAGGAAAACCTCAGAGCTGCCTCCTTTaGACTCAGGCAACAGGAGCT +
Preference number: 5 (lower is better)
Translates to: GIRTISQQRVNEKGKGKPQSCLL*TQATGA
Trigger: AGCTCCTGTTGCCTGAGTCAAAAGGAGGCAGCTCTG...AGGTTTTCCTTTCCCTTTTTCGTTAACTCTTTGTTGAGATATTGTTCGTATGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000319921.4
CDS-3UTR CAA 90 bp AGAATGAATATTAAGGATACTGCCTCTAACATATCAATAGCTGTGCTGAGCTGTGCCCCTTTAACTGCATaGGCTGGCTCAGCTACAGCA +
Preference number: 5 (lower is better)
Translates to: RMNIKDTASNISIAVLSCAPLTA*AGSATA
Trigger: TGCTGTAGCTGAGCCAGCCAATGCAGTTAAAGGGGC...ACAGCTCAGCACAGCTATTGATATGTTAGAGGCAGTATCCTTAATATTCATTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp GGCATACGAACAATATCTCAACAAAGAGTTAACGAAAAAGGGAAAGGAAAACCTGCCAGGTGTACGTCCTaGTGTCCATGCATCTTTGGC +
Preference number: 5 (lower is better)
Translates to: GIRTISQQRVNEKGKGKPARCTS*CPCIFG
Trigger: GCCAAAGATGCATGGACACAAGGACGTACACCTGGC...AGGTTTTCCTTTCCCTTTTTCGTTAACTCTTTGTTGAGATATTGTTCGTATGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000319921.4
CDS-3UTR CAA 90 bp GATGAGAAAGTTTCAGAACATGTATGTACATGGTTCAGAAACAGCTCGGCTTTCACAGAACTGCTTGACTaGCTGCAGGTAGCACTGCTT +
Preference number: 5 (lower is better)
Translates to: DEKVSEHVCTWFRNSSAFTELLD*LQVALL
Trigger: AAGCAGTGCTACCTGCAGCAAGTCAAGCAGTTCTGT...GAAAGCCGAGCTGTTTCTGAACCATGTACATACATGTTCTGAAACTTTCTCATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp CAATTTCAAAATGTCAGATCAGAAGAATCTTTGGCGATTAATCCACTCTCCATTGCGTGGGGTGGAGGCTaGCATTGTGGGATCTGTACA +
Preference number: 5 (lower is better)
Translates to: QFQNVRSEESLAINPLSIAWGGG*HCGICT
Trigger: TGTACAGATCCCACAATGCAAGCCTCCACCCCACGC...AATGGAGAGTGGATTAATCGCCAAAGATTCTTCTGATCTGACATTTTGAAATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp AGGACTAGATATTCATACATGCGAGAGCACACTGAGACTGCATGTTTATTTGGCAACAATGGCACAGAATaGTCCACGAGCGATGTTGCA +
Preference number: 5 (lower is better)
Translates to: RTRYSYMREHTETACLFGNNGTE*STSDVA
Trigger: TGCAACATCGCTCGTGGACAATTCTGTGCCATTGTT...GCCAAATAAACATGCAGTCTCAGTGTGCTCTCGCATGTATGAATATCTAGTCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp GAGTCCTGGACAAGCATTTTGTATTTTTGTAGTTCTCACTCCTTAGGCCCAATTGGGCTCAGATCCGCTTaGTACCTTGAACTGATTTCC +
Preference number: 5 (lower is better)
Translates to: ESWTSILYFCSSHSLGPIGLRSA*YLELIS
Trigger: GGAAATCAGTTCAAGGTACAAAGCGGATCTGAGCCC...AATTGGGCCTAAGGAGTGAGAACTACAAAAATACAAAATGCTTGTCCAGGACTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp CAATTTCAAAATGTCAGATCAGAAGAATCTTTGGCGATTAATCCACTCTCCATTTCAGGTGGTAATGCGTaGCCCTCTGCGAGTTCGAGG +
Preference number: 5 (lower is better)
Translates to: QFQNVRSEESLAINPLSISGGNA*PSASSR
Trigger: CCTCGAACTCGCAGAGGGCAACGCATTACCACCTGA...AATGGAGAGTGGATTAATCGCCAAAGATTCTTCTGATCTGACATTTTGAAATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp TGCTGGCCAGTCTATCTTACACAAAGTTTTAAGTTTTCCTGGTGTCATAGTACTCAAGCCAAAGTCCATTaGGAGGGACACACCCTGCTT +
Preference number: 5 (lower is better)
Translates to: CWPVYLTQSFKFSWCHSTQAKVH*EGHTLL
Trigger: AAGCAGGGTGTGTCCCTCCAAATGGACTTTGGCTTG...AGTACTATGACACCAGGAAAACTTAAAACTTTGTGTAAGATAGACTGGCCAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR CAA 90 bp CAATTTCAAAATGTCAGATCAGAAGAATCTTTGGCGATTAATCCACTCTCCATTATGAGCTCTGTCTCGTaGGGGCTGCCACGTGACACA +
Preference number: 5 (lower is better)
Translates to: QFQNVRSEESLAINPLSIMSSVS*GLPRDT
Trigger: TGTGTCACGTGGCAGCCCCAACGAGACAGAGCTCAT...AATGGAGAGTGGATTAATCGCCAAAGATTCTTCTGATCTGACATTTTGAAATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp CAATTTCAAAATGTCAGATCAGAAGAATCTTTGGCGATTAATCCACTCTCCATTGAGGAGCAGATGCCCTaGGCGCTCTCTATGAGCTCT +
Preference number: 5 (lower is better)
Translates to: QFQNVRSEESLAINPLSIEEQMP*ALSMSS
Trigger: AGAGCTCATAGAGAGCGCCAAGGGCATCTGCTCCTC...AATGGAGAGTGGATTAATCGCCAAAGATTCTTCTGATCTGACATTTTGAAATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp GATGAGAAAGTTTCAGAACATGTATGTACATGGTTCAGAAACAGCTCGGCTTTCCCAAAGATGTTCTGTTaGATCAGCTGCATGGGGCTG +
Preference number: 5 (lower is better)
Translates to: DEKVSEHVCTWFRNSSAFPKMFC*ISCMGL
Trigger: CAGCCCCATGCAGCTGATCAAACAGAACATCTTTGG...GAAAGCCGAGCTGTTTCTGAACCATGTACATACATGTTCTGAAACTTTCTCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp AGGACTAGATATTCATACATGCGAGAGCACACTGAGACTGCATGTTTATTTGGCGGGATGGGAAAGTGTTaGTACACGACGTCTTTCTCT +
Preference number: 5 (lower is better)
Translates to: RTRYSYMREHTETACLFGGMGKC*YTTSFS
Trigger: AGAGAAAGACGTCGTGTACAAACACTTTCCCATCCC...GCCAAATAAACATGCAGTCTCAGTGTGCTCTCGCATGTATGAATATCTAGTCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp TTTTTCCAGCTGGAAACGGGATTCGTAATGGTAATGGTTGAACTTAATGAACGTATGTCCACGAACTTCTaGGGCAGTCCTTCTGCGTCT +
Preference number: 5 (lower is better)
Translates to: FFQLETGFVMVMVELNERMSTNF*GSPSAS
Trigger: AGACGCAGAAGGACTGCCCAAGAAGTTCGTGGACAT...ACGTTCATTAAGTTCAACCATTACCATTACGAATCCCGTTTCCAGCTGGAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR CAA 90 bp GAAAGTTTCAGAACATGTATGTACATGGTTCAGAAACAGCTCGGCTTTCAAAAAGCTTCAGGGTGTTTCTaGTCAGCATCTCCGTGCAGG +
Preference number: 5 (lower is better)
Translates to: ESFRTCMYMVQKQLGFQKASGCF*SASPCR
Trigger: CCTGCACGGAGATGCTGACAAGAAACACCCTGAAGC...TTTTTGAAAGCCGAGCTGTTTCTGAACCATGTACATACATGTTCTGAAACTTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp CAATTTCAAAATGTCAGATCAGAAGAATCTTTGGCGATTAATCCACTCTCCATTGGCGGAGCGTTGTCCTaGAAGCAAATGGTGGACACC +
Preference number: 5 (lower is better)
Translates to: QFQNVRSEESLAINPLSIGGALS*KQMVDT
Trigger: GGTGTCCACCATTTGCTTCAAGGACAACGCTCCGCC...AATGGAGAGTGGATTAATCGCCAAAGATTCTTCTGATCTGACATTTTGAAATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS GCA 90 bp TGTAAGGAATGTATTTATCTAGGTGCTTCTTGGAAATGCAGACAATaGCTTCAACAAGAACGCGGTCATGACCCAAGTCTCTGGTGTAGT +
Preference number: 5 (lower is better)
Translates to: CKECIYLGASWKCRQ*LQQERGHDPSLWCS
Trigger: ACTACACCAGAGACTTGGGTCATGACCGCGTTCTTGTTGAAGGCATTGTCTGCATTTCCAAGAAGCACCTAGATAAATACATTCCTTACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319921.4
ENST00000508628.6
ENST00000559070.5
ENST00000573548.1
ENST00000582970.5
CDS-3UTR CAA 90 bp CAATTTCAAAATGTCAGATCAGAAGAATCTTTGGCGATTAATCCACTCTCCATTCCTGAGGCCACGGGTTaGAAAGCAAAGTCAGGTGAC +
Preference number: 5 (lower is better)
Translates to: QFQNVRSEESLAINPLSIPEATG*KAKSGD
Trigger: GTCACCTGACTTTGCTTTCAAACCCGTGGCCTCAGG...AATGGAGAGTGGATTAATCGCCAAAGATTCTTCTGATCTGACATTTTGAAATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp GTCTCTTCTAAAAATACAAAAGGAACCGAGTGTGGCGGCACATTGTTCTTTAAATCCTGGCAGTGTGTTTaGAAAGGAGGAGTGGTTGCT +
Preference number: 5 (lower is better)
Translates to: VSSKNTKGTECGGTLFFKSWQCV*KGGVVA
Trigger: AGCAACCACTCCTCCTTTCAAAACACACTGCCAGGA...TTTAAAGAACAATGTGCCGCCACACTCGGTTCCTTTTGTATTTTTAGAAGAGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000319921.4
CDS-3UTR CAA 90 bp ATGGCATACGAACAATATCTCAACAAAGAGTTAACGAAAAAGGGAAAGGAAAACATCTCGTCCTTGGTCTaGGTCTCAGCTTCCTGGCAG +
Preference number: 5 (lower is better)
Translates to: MAYEQYLNKELTKKGKENISSLV*VSASWQ
Trigger: CTGCCAGGAAGCTGAGACCAAGACCAAGGACGAGAT...GTTTTCCTTTCCCTTTTTCGTTAACTCTTTGTTGAGATATTGTTCGTATGCCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000319921.4
CDS-3UTR CAA 90 bp CAATTTCAAAATGTCAGATCAGAAGAATCTTTGGCGATTAATCCACTCTCCATTGCATCACGGAGAGCCTaGTATTCATCGCCGTACACC +
Preference number: 5 (lower is better)
Translates to: QFQNVRSEESLAINPLSIASRRA*YSSPYT
Trigger: GGTGTACGGCGATGAATACAAGGCTCTCCGTGATGC...AATGGAGAGTGGATTAATCGCCAAAGATTCTTCTGATCTGACATTTTGAAATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp ACTGCGTGTGTGGCTGAGCTACAAGTCTCCTGGAATGTAAACAATGTTGGTTTATCACCATATATTATTTaGGCCACAGGGTTAGAGCTG +
Preference number: 5 (lower is better)
Translates to: TACVAELQVSWNVNNVGLSPYII*ATGLEL
Trigger: CAGCTCTAACCCTGTGGCCAAAATAATATATGGTGA...TAAACCAACATTGTTTACATTCCAGGAGACTTGTAGCTCAGCCACACACGCAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp GAAAGTTTCAGAACATGTATGTACATGGTTCAGAAACAGCTCGGCTTTCAAAAAAAAATGTCATCGAAGTaGTCCGCGGTCCTAGGCCAG +
Preference number: 5 (lower is better)
Translates to: ESFRTCMYMVQKQLGFQKKMSSK*SAVLGQ
Trigger: CTGGCCTAGGACCGCGGACAACTTCGATGACATTTT...TTTTTGAAAGCCGAGCTGTTTCTGAACCATGTACATACATGTTCTGAAACTTTC
43% GC, longest homopolymer 9 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp TGCTGGCCAGTCTATCTTACACAAAGTTTTAAGTTTTCCTGGTGTCATAGTACTTGTTCGACTCGGTCCTaGATCCAATCTCTTTGGTCC +
Preference number: 5 (lower is better)
Translates to: CWPVYLTQSFKFSWCHSTCSTRS*IQSLWS
Trigger: GGACCAAAGAGATTGGATCAAGGACCGAGTCGAACA...AGTACTATGACACCAGGAAAACTTAAAACTTTGTGTAAGATAGACTGGCCAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR CAA 90 bp TCACAATTTCAAAATGTCAGATCAGAAGAATCTTTGGCGATTAATCCACTCTCCAACACCTTCAGCTCATaGATGCCTCCAAGAGCCTCC +
Preference number: 5 (lower is better)
Translates to: SQFQNVRSEESLAINPLSNTFSS*MPPRAS
Trigger: GGAGGCTCTTGGAGGCATCAATGAGCTGAAGGTGTT...GGAGAGTGGATTAATCGCCAAAGATTCTTCTGATCTGACATTTTGAAATTGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp GAGTCCTGGACAAGCATTTTGTATTTTTGTAGTTCTCACTCCTTAGGCCCAATTCCAATAAAACTCGGATaGCAGAAGAGAGAGGCCTCA +
Preference number: 5 (lower is better)
Translates to: ESWTSILYFCSSHSLGPIPIKLG*QKREAS
Trigger: TGAGGCCTCTCTCTTCTGCAATCCGAGTTTTATTGG...AATTGGGCCTAAGGAGTGAGAACTACAAAAATACAAAATGCTTGTCCAGGACTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp GAAAGTTTCAGAACATGTATGTACATGGTTCAGAAACAGCTCGGCTTTCAAAAAGGTGTCCAACTGATGTaGGTCCTTATTGGCGAAGGC +
Preference number: 5 (lower is better)
Translates to: ESFRTCMYMVQKQLGFQKGVQLM*VLIGEG
Trigger: GCCTTCGCCAATAAGGACCAACATCAGTTGGACACC...TTTTTGAAAGCCGAGCTGTTTCTGAACCATGTACATACATGTTCTGAAACTTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp GAAAGTTTCAGAACATGTATGTACATGGTTCAGAAACAGCTCGGCTTTCAAAAATTGCTGACGCTGGACTaGGAGAGAAAGGCATTCAGC +
Preference number: 5 (lower is better)
Translates to: ESFRTCMYMVQKQLGFQKLLTLD*ERKAFS
Trigger: GCTGAATGCCTTTCTCTCCAAGTCCAGCGTCAGCAA...TTTTTGAAAGCCGAGCTGTTTCTGAACCATGTACATACATGTTCTGAAACTTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp GAGTCCTGGACAAGCATTTTGTATTTTTGTAGTTCTCACTCCTTAGGCCCAATTAGAAGCAACACCATCTaGCCTGTTTCCATGCAGATC +
Preference number: 5 (lower is better)
Translates to: ESWTSILYFCSSHSLGPIRSNTI*PVSMQI
Trigger: GATCTGCATGGAAACAGGCAAGATGGTGTTGCTTCT...AATTGGGCCTAAGGAGTGAGAACTACAAAAATACAAAATGCTTGTCCAGGACTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp AGAATGAATATTAAGGATACTGCCTCTAACATATCAATAGCTGTGCTGAGCTGTGCACTTTCCTGGCGCTaGTTTTTCCAGCTGGAAACG +
Preference number: 5 (lower is better)
Translates to: RMNIKDTASNISIAVLSCALSWR*FFQLET
Trigger: CGTTTCCAGCTGGAAAAACAAGCGCCAGGAAAGTGC...ACAGCTCAGCACAGCTATTGATATGTTAGAGGCAGTATCCTTAATATTCATTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR CAA 90 bp GAAAGTTTCAGAACATGTATGTACATGGTTCAGAAACAGCTCGGCTTTCAAAAATCCTGGCAGTGTGTTTaGAAAGGAGGAGTGGTTGCT +
Preference number: 5 (lower is better)
Translates to: ESFRTCMYMVQKQLGFQKSWQCV*KGGVVA
Trigger: AGCAACCACTCCTCCTTTCAAAACACACTGCCAGGA...TTTTTGAAAGCCGAGCTGTTTCTGAACCATGTACATACATGTTCTGAAACTTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp GGCATACGAACAATATCTCAACAAAGAGTTAACGAAAAAGGGAAAGGAAAACCTTGTGTCCATGCATCTTaGGCACAGGTTCACCAGGTA +
Preference number: 5 (lower is better)
Translates to: GIRTISQQRVNEKGKGKPCVHAS*AQVHQV
Trigger: TACCTGGTGAACCTGTGCCAAAGATGCATGGACACA...AGGTTTTCCTTTCCCTTTTTCGTTAACTCTTTGTTGAGATATTGTTCGTATGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000319921.4
CDS-3UTR CAA 90 bp TCACAATTTCAAAATGTCAGATCAGAAGAATCTTTGGCGATTAATCCACTCTCCCTGTCCTCTAAGCCTTaGGTGTCCCAGCAACTATTG +
Preference number: 5 (lower is better)
Translates to: SQFQNVRSEESLAINPLSLSSKP*VSQQLL
Trigger: CAATAGTTGCTGGGACACCAAAGGCTTAGAGGACAG...GGAGAGTGGATTAATCGCCAAAGATTCTTCTGATCTGACATTTTGAAATTGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp GAAAGTTTCAGAACATGTATGTACATGGTTCAGAAACAGCTCGGCTTTCAAAAAGGAGCTGTATTCAACTaGCTGGACGTTCTGGAACTG +
Preference number: 5 (lower is better)
Translates to: ESFRTCMYMVQKQLGFQKGAVFN*LDVLEL
Trigger: CAGTTCCAGAACGTCCAGCAAGTTGAATACAGCTCC...TTTTTGAAAGCCGAGCTGTTTCTGAACCATGTACATACATGTTCTGAAACTTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp GAAAGTTTCAGAACATGTATGTACATGGTTCAGAAACAGCTCGGCTTTCAAAAAAGCCTGTGCAATGTCTaGCGGGGAAGGCTTTCTATT +
Preference number: 5 (lower is better)
Translates to: ESFRTCMYMVQKQLGFQKSLCNV*RGRLSI
Trigger: AATAGAAAGCCTTCCCCGCAAGACATTGCACAGGCT...TTTTTGAAAGCCGAGCTGTTTCTGAACCATGTACATACATGTTCTGAAACTTTC
42% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp TGCTGGCCAGTCTATCTTACACAAAGTTTTAAGTTTTCCTGGTGTCATAGTACTGTGTACTCTTGGTCCTaGGGGAAACCAGAACCAAAA +
Preference number: 5 (lower is better)
Translates to: CWPVYLTQSFKFSWCHSTVYSWS*GKPEPK
Trigger: TTTTGGTTCTGGTTTCCCCAAGGACCAAGAGTACAC...AGTACTATGACACCAGGAAAACTTAAAACTTTGTGTAAGATAGACTGGCCAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR CAA 90 bp TCACAATTTCAAAATGTCAGATCAGAAGAATCTTTGGCGATTAATCCACTCTCCGGGTGGAGGCTTGCATaGTGGGATCTGTACAAAATA +
Preference number: 5 (lower is better)
Translates to: SQFQNVRSEESLAINPLSGWRLA*WDLYKI
Trigger: TATTTTGTACAGATCCCACAATGCAAGCCTCCACCC...GGAGAGTGGATTAATCGCCAAAGATTCTTCTGATCTGACATTTTGAAATTGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp TTTTTCCAGCTGGAAACGGGATTCGTAATGGTAATGGTTGAACTTAATGAACGTCGTCTGATCACCCATTaGCAGGATGTCTTGAGTATA +
Preference number: 5 (lower is better)
Translates to: FFQLETGFVMVMVELNERRLITH*QDVLSI
Trigger: TATACTCAAGACATCCTGCAAATGGGTGATCAGACG...ACGTTCATTAAGTTCAACCATTACCATTACGAATCCCGTTTCCAGCTGGAAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR CAA 90 bp AGAATGAATATTAAGGATACTGCCTCTAACATATCAATAGCTGTGCTGAGCTGTACAGCTATCAGCCTCTaGGCATCCTCTGTGACATTT +
Preference number: 5 (lower is better)
Translates to: RMNIKDTASNISIAVLSCTAISL*ASSVTF
Trigger: AAATGTCACAGAGGATGCCAAGAGGCTGATAGCTGT...ACAGCTCAGCACAGCTATTGATATGTTAGAGGCAGTATCCTTAATATTCATTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp GAGTCCTGGACAAGCATTTTGTATTTTTGTAGTTCTCACTCCTTAGGCCCAATTCACTCCAAAGTCCACTaGTATCAGATGTTTCACGTT +
Preference number: 5 (lower is better)
Translates to: ESWTSILYFCSSHSLGPIHSKVH*YQMFHV
Trigger: AACGTGAAACATCTGATACAAGTGGACTTTGGAGTG...AATTGGGCCTAAGGAGTGAGAACTACAAAAATACAAAATGCTTGTCCAGGACTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp GATGAGAAAGTTTCAGAACATGTATGTACATGGTTCAGAAACAGCTCGGCTTTCGGTCGATCAGTCGAATaGTTTTCAGAGGCACATTTT +
Preference number: 5 (lower is better)
Translates to: DEKVSEHVCTWFRNSSAFGRSVE*FSEAHF
Trigger: AAAATGTGCCTCTGAAAACAATTCGACTGATCGACC...GAAAGCCGAGCTGTTTCTGAACCATGTACATACATGTTCTGAAACTTTCTCATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp GAAAGTTTCAGAACATGTATGTACATGGTTCAGAAACAGCTCGGCTTTCAAAAATTCAAGGCCAAGTTCTaGGCGATGGTTTTCCTCAGA +
Preference number: 5 (lower is better)
Translates to: ESFRTCMYMVQKQLGFQKFKAKF*AMVFLR
Trigger: TCTGAGGAAAACCATCGCCAAGAACTTGGCCTTGAA...TTTTTGAAAGCCGAGCTGTTTCTGAACCATGTACATACATGTTCTGAAACTTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp TCACAATTTCAAAATGTCAGATCAGAAGAATCTTTGGCGATTAATCCACTCTCCTTTCACAGTCGTGACTaGTTAGCAGCCTGGAGAAAG +
Preference number: 5 (lower is better)
Translates to: SQFQNVRSEESLAINPLSFHSRD*LAAWRK
Trigger: CTTTCTCCAGGCTGCTAACAAGTCACGACTGTGAAA...GGAGAGTGGATTAATCGCCAAAGATTCTTCTGATCTGACATTTTGAAATTGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp AGAATGAATATTAAGGATACTGCCTCTAACATATCAATAGCTGTGCTGAGCTGTCAGGATGCTGTCATTTaGTCCAGAGGAAAAGTCCAC +
Preference number: 5 (lower is better)
Translates to: RMNIKDTASNISIAVLSCQDAVI*SRGKVH
Trigger: GTGGACTTTTCCTCTGGACAAAATGACAGCATCCTG...ACAGCTCAGCACAGCTATTGATATGTTAGAGGCAGTATCCTTAATATTCATTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582970.5
CDS-3UTR CAA 90 bp GGCATACGAACAATATCTCAACAAAGAGTTAACGAAAAAGGGAAAGGAAAACCTCAGACCTCAATTTCCTaGACGTATGTGAATGAGGCA +
Preference number: 5 (lower is better)
Translates to: GIRTISQQRVNEKGKGKPQTSIS*TYVNEA
Trigger: TGCCTCATTCACATACGTCAAGGAAATTGAGGTCTG...AGGTTTTCCTTTCCCTTTTTCGTTAACTCTTTGTTGAGATATTGTTCGTATGCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000319921.4
CDS-3UTR CAA 90 bp TCACAATTTCAAAATGTCAGATCAGAAGAATCTTTGGCGATTAATCCACTCTCCCATTCGCCAATGAATTaGCTCACAGCTTCACATTGC +
Preference number: 5 (lower is better)
Translates to: SQFQNVRSEESLAINPLSHSPMN*LTASHC
Trigger: GCAATGTGAAGCTGTGAGCAAATTCATTGGCGAATG...GGAGAGTGGATTAATCGCCAAAGATTCTTCTGATCTGACATTTTGAAATTGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp GAAAGTTTCAGAACATGTATGTACATGGTTCAGAAACAGCTCGGCTTTCAAAAAGGAGGTGAAAGGATCTaGCATTCGCCAATGAATTTG +
Preference number: 5 (lower is better)
Translates to: ESFRTCMYMVQKQLGFQKGGERI*HSPMNL
Trigger: CAAATTCATTGGCGAATGCAAGATCCTTTCACCTCC...TTTTTGAAAGCCGAGCTGTTTCTGAACCATGTACATACATGTTCTGAAACTTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp CAATTTCAAAATGTCAGATCAGAAGAATCTTTGGCGATTAATCCACTCTCCATTAACAATGGCACAGAATaGTCCACGAGCGATGTTGCA +
Preference number: 5 (lower is better)
Translates to: QFQNVRSEESLAINPLSINNGTE*STSDVA
Trigger: TGCAACATCGCTCGTGGACAATTCTGTGCCATTGTT...AATGGAGAGTGGATTAATCGCCAAAGATTCTTCTGATCTGACATTTTGAAATTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp AGGACTAGATATTCATACATGCGAGAGCACACTGAGACTGCATGTTTATTTGGCTCCTGGACAAGCATTTaGTATTTTTGTAGTTCTCAC +
Preference number: 5 (lower is better)
Translates to: RTRYSYMREHTETACLFGSWTSI*YFCSSH
Trigger: GTGAGAACTACAAAAATACAAAATGCTTGTCCAGGA...GCCAAATAAACATGCAGTCTCAGTGTGCTCTCGCATGTATGAATATCTAGTCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp CAATTTCAAAATGTCAGATCAGAAGAATCTTTGGCGATTAATCCACTCTCCATTCAGTTTCGGACTTCTTaGAGGAATGAGTACTCGGTG +
Preference number: 5 (lower is better)
Translates to: QFQNVRSEESLAINPLSIQFRTS*RNEYSV
Trigger: CACCGAGTACTCATTCCTCAAAGAAGTCCGAAACTG...AATGGAGAGTGGATTAATCGCCAAAGATTCTTCTGATCTGACATTTTGAAATTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp CAATTTCAAAATGTCAGATCAGAAGAATCTTTGGCGATTAATCCACTCTCCATTGTCAGTAACTCTAGGTaGCCGTCTCTGTCGATGAAT +
Preference number: 5 (lower is better)
Translates to: QFQNVRSEESLAINPLSIVSNSR*PSLSMN
Trigger: ATTCATCGACAGAGACGGCAACCTAGAGTTACTGAC...AATGGAGAGTGGATTAATCGCCAAAGATTCTTCTGATCTGACATTTTGAAATTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp GGCATACGAACAATATCTCAACAAAGAGTTAACGAAAAAGGGAAAGGAAAACCTTATTGCTGTCCCATTTaGACTCCCCAAATTCTTCTC +
Preference number: 5 (lower is better)
Translates to: GIRTISQQRVNEKGKGKPYCCPI*TPQILL
Trigger: GAGAAGAATTTGGGGAGTCAAAATGGGACAGCAATA...AGGTTTTCCTTTCCCTTTTTCGTTAACTCTTTGTTGAGATATTGTTCGTATGCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000319921.4
CDS-3UTR CAA 90 bp GGCATACGAACAATATCTCAACAAAGAGTTAACGAAAAAGGGAAAGGAAAACCTTTATCTAGGTGCTTCTaGGAAATGCAGACAATGCCT +
Preference number: 5 (lower is better)
Translates to: GIRTISQQRVNEKGKGKPLSRCF*EMQTMP
Trigger: AGGCATTGTCTGCATTTCCAAGAAGCACCTAGATAA...AGGTTTTCCTTTCCCTTTTTCGTTAACTCTTTGTTGAGATATTGTTCGTATGCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000319921.4
CDS-3UTR CAA 90 bp GAAAGTTTCAGAACATGTATGTACATGGTTCAGAAACAGCTCGGCTTTCAAAAAATGGGCACTCTTTCTTaGCCATTTTTCTGTTCCACA +
Preference number: 5 (lower is better)
Translates to: ESFRTCMYMVQKQLGFQKMGTLS*PFFCST
Trigger: TGTGGAACAGAAAAATGGCAAAGAAAGAGTGCCCAT...TTTTTGAAAGCCGAGCTGTTTCTGAACCATGTACATACATGTTCTGAAACTTTC
39% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp AGAATGAATATTAAGGATACTGCCTCTAACATATCAATAGCTGTGCTGAGCTGTGAGTCCTGTGCCATTTaGTTCTTGATGTCCATAAAG +
Preference number: 5 (lower is better)
Translates to: RMNIKDTASNISIAVLSCESCAI*FLMSIK
Trigger: CTTTATGGACATCAAGAACAAAATGGCACAGGACTC...ACAGCTCAGCACAGCTATTGATATGTTAGAGGCAGTATCCTTAATATTCATTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp GAAAGTTTCAGAACATGTATGTACATGGTTCAGAAACAGCTCGGCTTTCAAAAACATTTGCAGGATGTCTaGAGTATACACATTCAGCTG +
Preference number: 5 (lower is better)
Translates to: ESFRTCMYMVQKQLGFQKHLQDV*SIHIQL
Trigger: CAGCTGAATGTGTATACTCAAGACATCCTGCAAATG...TTTTTGAAAGCCGAGCTGTTTCTGAACCATGTACATACATGTTCTGAAACTTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS GCA 90 bp TGCATCAACATCATTCCTAAGAATCAAACCCACAAGATGTCAATCTaGTTTTACTCTACAAGAAAACTTGCTGATTTGCTGTCTTGCTTG +
Preference number: 5 (lower is better)
Translates to: CINIIPKNQTHKMSI*FYSTRKLADLLSCL
Trigger: CAAGCAAGACAGCAAATCAGCAAGTTTTCTTGTAGAGTAAAAGCAGATTGACATCTTGTGGGTTTGATTCTTAGGAATGATGTTGATGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000560083.1
ENST00000573919.1
CDS-3UTR CAA 90 bp ATGGCATACGAACAATATCTCAACAAAGAGTTAACGAAAAAGGGAAAGGAAAACGCCATTGTGGAGTTATaGTTCTCAGAATCTGCTATG +
Preference number: 5 (lower is better)
Translates to: MAYEQYLNKELTKKGKENAIVEL*FSESAM
Trigger: CATAGCAGATTCTGAGAACAATAACTCCACAATGGC...GTTTTCCTTTCCCTTTTTCGTTAACTCTTTGTTGAGATATTGTTCGTATGCCAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000319921.4
CDS-3UTR CAA 90 bp GGCATACGAACAATATCTCAACAAAGAGTTAACGAAAAAGGGAAAGGAAAACCTAAGCCACAGAAGCAGTaGTTTATGTTCAGCAATTGT +
Preference number: 5 (lower is better)
Translates to: GIRTISQQRVNEKGKGKPKPQKQ*FMFSNC
Trigger: ACAATTGCTGAACATAAACAACTGCTTCTGTGGCTT...AGGTTTTCCTTTCCCTTTTTCGTTAACTCTTTGTTGAGATATTGTTCGTATGCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000319921.4
CDS-3UTR CAA 90 bp CAATTTCAAAATGTCAGATCAGAAGAATCTTTGGCGATTAATCCACTCTCCATTTCACACAGGACTTCTTaGATACAGCTTATAGCTTCC +
Preference number: 5 (lower is better)
Translates to: QFQNVRSEESLAINPLSISHRTS*IQLIAS
Trigger: GGAAGCTATAAGCTGTATCAAAGAAGTCCTGTGTGA...AATGGAGAGTGGATTAATCGCCAAAGATTCTTCTGATCTGACATTTTGAAATTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS-3UTR CAA 90 bp GGCATACGAACAATATCTCAACAAAGAGTTAACGAAAAAGGGAAAGGAAAACCTGAGTGTGGCGGCACATaGTTCTTTAAACAATTAAAA +
Preference number: 5 (lower is better)
Translates to: GIRTISQQRVNEKGKGKPECGGT*FFKQLK
Trigger: TTTTAATTGTTTAAAGAACAATGTGCCGCCACACTC...AGGTTTTCCTTTCCCTTTTTCGTTAACTCTTTGTTGAGATATTGTTCGTATGCC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000319921.4
CDS CCA 72 bp CGGTGGGCGCGGAGAGGCCGTCACCCTCCAGTGGCGTaGTGGCTGTGCCTGGGGGCTGGCTCGGCTGGCCAG +
Preference number: 6 (lower is better)
Translates to: RWARRGRHPPVA*WLCLGAGSAGQ
Trigger: CTGGCCAGCCGAGCCAGCCCCCAGGCACAGCCACCACGCCACTGGAGGGTGACGGCCTCTCCGCGCCCACCG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000319921.4
ENST00000508628.6
ENST00000559070.5
ENST00000582970.5
CDS GCA 72 bp ACCCACTGGTGCGGGCGGCCGGGCTTGGAGAGGCCCTaGACGAACTCCATCCCCCGCTGGCTGCTGAGCTTC +
Preference number: 6 (lower is better)
Translates to: THWCGRPGLERP*TNSIPRWLLSF
Trigger: GAAGCTCAGCAGCCAGCGGGGGATGGAGTTCGTGCAGGGCCTCTCCAAGCCCGGCCGCCCGCACCAGTGGGT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000411702.7
ENST00000508628.6
ENST00000558116.5
ENST00000582970.5
CDS CCA 72 bp CCTTGGGAAACACCCACTGGTGCGGGCGGCCGGGCTTaGAGAGGCCCTGCACGAACTCCATCCCCCGCTGGC +
Preference number: 6 (lower is better)
Translates to: PWETPTGAGGRA*RGPARTPSPAG
Trigger: GCCAGCGGGGGATGGAGTTCGTGCAGGGCCTCTCCAAGCCCGGCCGCCCGCACCAGTGGGTGTTTCCCAAGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000411702.7
ENST00000508628.6
ENST00000558116.5
ENST00000573038.1
ENST00000582970.5
CDS CAA 90 bp GCCAGGGCGGCTGGCAACACCTCGGAGTGGCCACAGACGACGAGGTaGGGCTGGCCGACCTGCAGACCTCTCGGGAGACAACGCTCCACG +
Preference number: 6 (lower is better)
Translates to: ARAAGNTSEWPQTTR*GWPTCRPLGRQRST
Trigger: CGTGGAGCGTTGTCTCCCGAGAGGTCTGCAGGTCGGCCAGCCCAACCTCGTCGTCTGTGGCCACTCCGAGGTGTTGCCAGCCGCCCTGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS CAA 72 bp GCAGCCGGGCCCTGCATGGCGTCTGCCACGATGGTCTaGGCGAGAGACTTGGAGCTGCCGGGCTTCCCCACC +
Preference number: 6 (lower is better)
Translates to: AAGPCMASATMV*ARDLELPGFPT
Trigger: GGTGGGGAAGCCCGGCAGCTCCAAGTCTCTCGCCAAGACCATCGTGGCAGACGCCATGCAGGGCCCGGCTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS GCA 72 bp GGCAGCCCTCGGTCACATGTCACCACGTCTCTCCGCTaGGGGTTGCCCAGCACGTGGCCGGTCTGCGTTCTG +
Preference number: 6 (lower is better)
Translates to: GSPRSHVTTSLR*GLPSTWPVCVL
Trigger: CAGAACGCAGACCGGCCACGTGCTGGGCAACCCGCAGCGGAGAGACGTGGTGACATGTGACCGAGGGCTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411702.7
ENST00000508628.6
ENST00000558116.5
ENST00000582970.5
CDS GCA 72 bp CAGGGAGCCCAGGGTCAGGCAGCGGCGCAGCAACAGTaGCACCTCCTCAAAGGTGGTTGCCGGGGTGCAGAG +
Preference number: 6 (lower is better)
Translates to: QGAQGQAAAQQQ*HLLKGGCRGAE
Trigger: CTCTGCACCCCGGCAACCACCTTTGAGGAGGTGGCACTGTTGCTGCGCCGCTGCCTGACCCTGGGCTCCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS GCA 72 bp CGCCGACAGGGTCTGCTTCGGGACCCGGTAGTGACCTaGCAGGTAGGCTTGGATGGCCTCGAGGGGTGCCTG +
Preference number: 6 (lower is better)
Translates to: RRQGLLRDPVVT*QVGLDGLEGCL
Trigger: CAGGCACCCCTCGAGGCCATCCAAGCCTACCTGGCAGGTCACTACCGGGTCCCGAAGCAGACCCTGTCGGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS CCA 72 bp CAGCCGGGCCCTGCATGGCGTCTGCCACGATGGTCTTaGCGAGAGACTTGGAGCTGCCGGGCTTCCCCACCA +
Preference number: 6 (lower is better)
Translates to: QPGPAWRLPRWS*RETWSCRASPP
Trigger: TGGTGGGGAAGCCCGGCAGCTCCAAGTCTCTCGCCAAGACCATCGTGGCAGACGCCATGCAGGGCCCGGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS CCA 72 bp TCCGTGCAGGCCATTGCGGCAAATGCGTCCAGGGTCTaGGGAGACGGACAGCAGGGCGTGGCTGAGCGGTGC +
Preference number: 6 (lower is better)
Translates to: SVQAIAANASRV*GDGQQGVAERC
Trigger: GCACCGCTCAGCCACGCCCTGCTGTCCGTCTCCCCAGACCCTGGACGCATTTGCCGCAATGGCCTGCACGGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558488.1
CDS TCA 72 bp AGAGGCCCTGCACGAACTCCATCCCCCGCTGGCTGCTaGGCTTCCGCACCAGGTACACCCGGTGCCAGTCGT +
Preference number: 6 (lower is better)
Translates to: RGPARTPSPAGC*ASAPGTPGASR
Trigger: ACGACTGGCACCGGGTGTACCTGGTGCGGAAGCTCAGCAGCCAGCGGGGGATGGAGTTCGTGCAGGGCCTCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000411702.7
ENST00000508628.6
ENST00000558116.5
ENST00000582970.5
CDS GCA 72 bp GCCCACAAGACAGCGAGCCTGCTTGCGCTGCCGTTGTaGTGTGTGATCCCCGCCCAGCCCTTGCCCCTTTCC +
Preference number: 6 (lower is better)
Translates to: AHKTASLLALPL*CVIPAQPLPLS
Trigger: GGAAAGGGGCAAGGGCTGGGCGGGGATCACACAGCACAACGGCAGCGCAAGCAGGCTCGCTGTCTTGTGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000411702.7
ENST00000558116.5
CDS GCA 72 bp TGTGTGTGGGGTGGCCCACAAGACAGCGAGCCTGCTTaGGCTGCCGTTGTGCTGTGTGATCCCCGCCCAGCC +
Preference number: 6 (lower is better)
Translates to: CVWGGPQDSEPA*AAVVLCDPRPA
Trigger: GGCTGGGCGGGGATCACACAGCACAACGGCAGCGCAAGCAGGCTCGCTGTCTTGTGGGCCACCCCACACACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000411702.7
ENST00000558116.5
CDS GCA 72 bp GAGTGGCCACAGACGACGAGGTTGGGCTGGCCGACCTaGAGACCTCTCGGGAGACAACGCTCCACGGGAGAC +
Preference number: 6 (lower is better)
Translates to: EWPQTTRLGWPT*RPLGRQRSTGD
Trigger: GTCTCCCGTGGAGCGTTGTCTCCCGAGAGGTCTGCAGGTCGGCCAGCCCAACCTCGTCGTCTGTGGCCACTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS CCA 72 bp AGTAGGCAGCCGGGCCCTGCATGGCGTCTGCCACGATaGTCTTGGCGAGAGACTTGGAGCTGCCGGGCTTCC +
Preference number: 6 (lower is better)
Translates to: SRQPGPAWRLPR*SWRETWSCRAS
Trigger: GGAAGCCCGGCAGCTCCAAGTCTCTCGCCAAGACCATCGTGGCAGACGCCATGCAGGGCCCGGCTGCCTACT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS CAA 72 bp GTGGCCCACAAGACAGCGAGCCTGCTTGCGCTGCCGTaGTGCTGTGTGATCCCCGCCCAGCCCTTGCCCCTT +
Preference number: 6 (lower is better)
Translates to: VAHKTASLLALP*CCVIPAQPLPL
Trigger: AAGGGGCAAGGGCTGGGCGGGGATCACACAGCACAACGGCAGCGCAAGCAGGCTCGCTGTCTTGTGGGCCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000411702.7
ENST00000558116.5
CDS CAA 90 bp GGGGGCAGCCCTCGGTCACATGTCACCACGTCTCTCCGCTGCGGGTaGCCCAGCACGTGGCCGGTCTGCGTTCTGTCTGCCTTGTCTTTG +
Preference number: 6 (lower is better)
Translates to: GGSPRSHVTTSLRCG*PSTWPVCVLSALSL
Trigger: CAAAGACAAGGCAGACAGAACGCAGACCGGCCACGTGCTGGGCAACCCGCAGCGGAGAGACGTGGTGACATGTGACCGAGGGCTGCCCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000411702.7
ENST00000508628.6
ENST00000558116.5
ENST00000582970.5
CDS CAA 90 bp GCCGGGCCCTGCATGGCGTCTGCCACGATGGTCTTGGCGAGAGACTaGGAGCTGCCGGGCTTCCCCACCAGGAAGAGGGGAATCTTCAGC +
Preference number: 6 (lower is better)
Translates to: AGPCMASATMVLARD*ELPGFPTRKRGIFS
Trigger: GCTGAAGATTCCCCTCTTCCTGGTGGGGAAGCCCGGCAGCTCCAAGTCTCTCGCCAAGACCATCGTGGCAGACGCCATGCAGGGCCCGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS TCA 72 bp CACCAGGTGGACCTGCTTCAGGCTGCGGAAGAGATCTaGGTAGGCAGCCGGGCCCTGCATGGCGTCTGCCAC +
Preference number: 6 (lower is better)
Translates to: HQVDLLQAAEEI*VGSRALHGVCH
Trigger: GTGGCAGACGCCATGCAGGGCCCGGCTGCCTACTCAGATCTCTTCCGCAGCCTGAAGCAGGTCCACCTGGTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS GCA 72 bp CTCGGTCACATGTCACCACGTCTCTCCGCTGCGGGTTaGCCAGCACGTGGCCGGTCTGCGTTCTGTCTGCCT +
Preference number: 6 (lower is better)
Translates to: LGHMSPRLSAAG*PARGRSAFCLP
Trigger: AGGCAGACAGAACGCAGACCGGCCACGTGCTGGGCAACCCGCAGCGGAGAGACGTGGTGACATGTGACCGAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411702.7
ENST00000508628.6
ENST00000558116.5
ENST00000582970.5
CDS GCA 72 bp CTGTCTGTGAAAGTACTCCTGCGACAGCCACTCCGCTaGGAACCCGCCCAGCGAGTAGGCGCTCAGCCGGAC +
Preference number: 6 (lower is better)
Translates to: LSVKVLLRQPLR*EPAQRVGAQPD
Trigger: GTCCGGCTGAGCGCCTACTCGCTGGGCGGGTTCGCAGCGGAGTGGCTGTCGCAGGAGTACTTTCACAGACAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS CCA 72 bp GGAGAAGCCTGCGCAGGACGAGGTGGACCACGCCGATaGTCTCGTCGGCACTGTGTCCCAGCATCTTGGCCA +
Preference number: 6 (lower is better)
Translates to: GEACAGRGGPRR*SRRHCVPASWP
Trigger: TGGCCAAGATGCTGGGACACAGTGCCGACGAGACCATCGGCGTGGTCCACCTCGTCCTGCGCAGGCTTCTCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411702.7
ENST00000508628.6
ENST00000558116.5
ENST00000582970.5
CDS CCA 72 bp AACACCTCGGAGTGGCCACAGACGACGAGGTTGGGCTaGCCGACCTGCAGACCTCTCGGGAGACAACGCTCC +
Preference number: 6 (lower is better)
Translates to: NTSEWPQTTRLG*PTCRPLGRQRS
Trigger: GGAGCGTTGTCTCCCGAGAGGTCTGCAGGTCGGCCAGCCCAACCTCGTCGTCTGTGGCCACTCCGAGGTGTT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS CCA 72 bp CTGGCAACACCTCGGAGTGGCCACAGACGACGAGGTTaGGCTGGCCGACCTGCAGACCTCTCGGGAGACAAC +
Preference number: 6 (lower is better)
Translates to: LATPRSGHRRRG*AGRPADLSGDN
Trigger: GTTGTCTCCCGAGAGGTCTGCAGGTCGGCCAGCCCAACCTCGTCGTCTGTGGCCACTCCGAGGTGTTGCCAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS CCA 72 bp CTGATGATGCCCTGTGGGGTGGAGTGCGGGCTGCACTaGAAGGACACCAGGTGGACCTGCTTCAGGCTGCGG +
Preference number: 6 (lower is better)
Translates to: LMMPCGVECGLH*KDTRWTCFRLR
Trigger: CCGCAGCCTGAAGCAGGTCCACCTGGTGTCCTTCCAGTGCAGCCCGCACTCCACCCCACAGGGCATCATCAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS CCA 72 bp CCTGATGTGCTGGCCTCCGTCTCCATCGCCTCCTCATaGCCGTCTTCCGCCCGGTGTTCCAAGCCCAGCTCA +
Preference number: 6 (lower is better)
Translates to: PDVLASVSIASS*PSSARCSKPSS
Trigger: TGAGCTGGGCTTGGAACACCGGGCGGAAGACGGCCATGAGGAGGCGATGGAGACGGAGGCCAGCACATCAGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS CCA 72 bp GTGCTCTCCAGAGAGACGCGTCCAGTACCGCGGGATTaGCACCTGCACTCCGGAGGGGTGAGCAGACAGCCT +
Preference number: 6 (lower is better)
Translates to: VLSRETRPVPRD*HLHSGGVSRQP
Trigger: AGGCTGTCTGCTCACCCCTCCGGAGTGCAGGTGCCAATCCCGCGGTACTGGACGCGTCTCTCTGGAGAGCAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573548.1
CDS CAA 72 bp GCTGGCAACACCTCGGAGTGGCCACAGACGACGAGGTaGGGCTGGCCGACCTGCAGACCTCTCGGGAGACAA +
Preference number: 6 (lower is better)
Translates to: AGNTSEWPQTTR*GWPTCRPLGRQ
Trigger: TTGTCTCCCGAGAGGTCTGCAGGTCGGCCAGCCCAACCTCGTCGTCTGTGGCCACTCCGAGGTGTTGCCAGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS CAA 90 bp GGCAAAGTCTGTGCTCTCCAGAGAGACGCGTCCAGTACCGCGGGATaGGCACCTGCACTCCGGAGGGGTGAGCAGACAGCCTGCTGCCAC +
Preference number: 6 (lower is better)
Translates to: GKVCALQRDASSTAG*APALRRGEQTACCH
Trigger: GTGGCAGCAGGCTGTCTGCTCACCCCTCCGGAGTGCAGGTGCCAATCCCGCGGTACTGGACGCGTCTCTCTGGAGAGCACAGACTTTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573548.1
CDS TCA 72 bp AGACAGCGAGCCTGCTTGCGCTGCCGTTGTGCTGTGTaGTCCCCGCCCAGCCCTTGCCCCTTTCCTCACTTC +
Preference number: 6 (lower is better)
Translates to: RQRACLRCRCAV*SPPSPCPFPHF
Trigger: GAAGTGAGGAAAGGGGCAAGGGCTGGGCGGGGATCACACAGCACAACGGCAGCGCAAGCAGGCTCGCTGTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000411702.7
ENST00000558116.5
CDS GCA 72 bp GCGGCGCAGCAACAGTGCCACCTCCTCAAAGGTGGTTaGCGGGGTGCAGAGCAGCACCTCATCGTAAGTGGG +
Preference number: 6 (lower is better)
Translates to: AAQQQCHLLKGG*RGAEQHLIVSG
Trigger: CCCACTTACGATGAGGTGCTGCTCTGCACCCCGGCAACCACCTTTGAGGAGGTGGCACTGTTGCTGCGCCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS GCA 72 bp CACGATCCCAACACACAGCCGGTCATTGAACACGGCTaGCGCCGACAGGGTCTGCTTCGGGACCCGGTAGTG +
Preference number: 6 (lower is better)
Translates to: HDPNTQPVIEHG*RRQGLLRDPVV
Trigger: CACTACCGGGTCCCGAAGCAGACCCTGTCGGCGGCAGCCGTGTTCAATGACCGGCTGTGTGTTGGGATCGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS CCA 72 bp GTCACCACGTCTCTCCGCTGCGGGTTGCCCAGCACGTaGCCGGTCTGCGTTCTGTCTGCCTTGTCTTTGACC +
Preference number: 6 (lower is better)
Translates to: VTTSLRCGLPST*PVCVLSALSLT
Trigger: GGTCAAAGACAAGGCAGACAGAACGCAGACCGGCCACGTGCTGGGCAACCCGCAGCGGAGAGACGTGGTGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411702.7
ENST00000508628.6
ENST00000558116.5
ENST00000582970.5
CDS CCA 72 bp GCCTGCAGCCCCTTGCACCGGGCCTCGCTGATGTCCTaGAGCAGCTTTTTGGCCTGGATGAGCTCCTGGTTG +
Preference number: 6 (lower is better)
Translates to: ACSPLHRASLMS*SSFLAWMSSWL
Trigger: CAACCAGGAGCTCATCCAGGCCAAAAAGCTGCTCCAGGACATCAGCGAGGCCCGGTGCAAGGGGCTGCAGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000508628.6
ENST00000559070.5
ENST00000582970.5
CDS CCA 72 bp GGCAGCGGCGCAGCAACAGTGCCACCTCCTCAAAGGTaGTTGCCGGGGTGCAGAGCAGCACCTCATCGTAAG +
Preference number: 6 (lower is better)
Translates to: GSGAATVPPPQR*LPGCRAAPHRK
Trigger: CTTACGATGAGGTGCTGCTCTGCACCCCGGCAACCACCTTTGAGGAGGTGGCACTGTTGCTGCGCCGCTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS CCA 72 bp GTGTGCCTGAATGTGCCCGCCTCCTGGAGAGCGTCCTaGTTGCAGGCTTCCCTTGCCAACCACTCCAGAGGG +
Preference number: 6 (lower is better)
Translates to: VCLNVPASWRAS*LQASLANHSRG
Trigger: CCCTCTGGAGTGGTTGGCAAGGGAAGCCTGCAACCAGGACGCTCTCCAGGAGGCGGGCACATTCAGGCACAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000508628.6
ENST00000558116.5
ENST00000560694.1
ENST00000582970.5
CDS CCA 72 bp CGCTTCCAGAGGGTGTGCCTGAATGTGCCCGCCTCCTaGAGAGCGTCCTGGTTGCAGGCTTCCCTTGCCAAC +
Preference number: 6 (lower is better)
Translates to: RFQRVCLNVPAS*RASWLQASLAN
Trigger: GTTGGCAAGGGAAGCCTGCAACCAGGACGCTCTCCAGGAGGCGGGCACATTCAGGCACACCCTCTGGAAGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000508628.6
ENST00000558116.5
ENST00000560694.1
ENST00000582970.5
CDS CCA 72 bp CGACTCCACTGGGCTCTGACTTCCCTGATGACAGCCTaGGCCAGGCTCCCGCTGCCTTGCATGTGCTCATCG +
Preference number: 6 (lower is better)
Translates to: RLHWALTSLMTA*ARLPLPCMCSS
Trigger: CGATGAGCACATGCAAGGCAGCGGGAGCCTGGCCCAGGCTGTCATCAGGGAAGTCAGAGCCCAGTGGAGTCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000508628.6
ENST00000558116.5
ENST00000558488.1
ENST00000559603.1
ENST00000582970.5
CDS CAA 72 bp TGCATGGCGTCTGCCACGATGGTCTTGGCGAGAGACTaGGAGCTGCCGGGCTTCCCCACCAGGAAGAGGGGA +
Preference number: 6 (lower is better)
Translates to: CMASATMVLARD*ELPGFPTRKRG
Trigger: TCCCCTCTTCCTGGTGGGGAAGCCCGGCAGCTCCAAGTCTCTCGCCAAGACCATCGTGGCAGACGCCATGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS CAA 90 bp AGCGCAGGCAGTGCACGTGGTCGCAGGGCAGACAGACGGGGTCCTTaGCATCTCCCAGGCAGATGGAGCACGGCTGAATCCCAAACCTGC +
Preference number: 6 (lower is better)
Translates to: SAGSARGRRADRRGP*HLPGRWSTAESQTC
Trigger: GCAGGTTTGGGATTCAGCCGTGCTCCATCTGCCTGGGAGATGCAAAGGACCCCGTCTGTCTGCCCTGCGACCACGTGCACTGCCTGCGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000508628.6
ENST00000558116.5
ENST00000582970.5
CDS CAA 90 bp GGCAGCCTCTCTCCGCACTGGCTGCAGAACTTGGGGGTTTCCTCCTaGGAGACATGCTGGCACGAAGGACACTCCATGGGTCCTGCTGGG +
Preference number: 6 (lower is better)
Translates to: GSLSPHWLQNLGVSS*ETCWHEGHSMGPAG
Trigger: CCCAGCAGGACCCATGGAGTGTCCTTCGTGCCAGCATGTCTCCAAGGAGGAAACCCCCAAGTTCTGCAGCCAGTGCGGAGAGAGGCTGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000319921.4
ENST00000508628.6
ENST00000582970.5
CDS CAA 90 bp ATGGGGGCTGCAGGAGGCAGCCTCTCTCCGCACTGGCTGCAGAACTaGGGGGTTTCCTCCTTGGAGACATGCTGGCACGAAGGACACTCC +
Preference number: 6 (lower is better)
Translates to: MGAAGGSLSPHWLQN*GVSSLETCWHEGHS
Trigger: GGAGTGTCCTTCGTGCCAGCATGTCTCCAAGGAGGAAACCCCCAAGTTCTGCAGCCAGTGCGGAGAGAGGCTGCCTCCTGCAGCCCCCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000319921.4
ENST00000508628.6
ENST00000582970.5
CDS CAA 90 bp AGGCGGATCCGGGCCACCTCTTGCAGGTATTCAACCGAGGCCTCGTaGGCAGGCTCTCGGCCCCGGCTTGCTGGAGAATATGCCTTAAGG +
Preference number: 6 (lower is better)
Translates to: RRIRATSCRYSTEAS*AGSRPRLAGEYALR
Trigger: CCTTAAGGCATATTCTCCAGCAAGCCGGGGCCGAGAGCCTGCCAACGAGGCCTCGGTTGAATACCTGCAAGAGGTGGCCCGGATCCGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411702.7
ENST00000508628.6
ENST00000558116.5
ENST00000582970.5
CDS CAA 90 bp GCCCTTGCCCCTTTCCTCACTTCTGCTAGAGAGCTGGTGCTGCTCTaGGAGAAGCCTGCGCAGGACGAGGTGGACCACGCCGATGGTCTC +
Preference number: 6 (lower is better)
Translates to: ALAPFLTSARELVLL*EKPAQDEVDHADGL
Trigger: GAGACCATCGGCGTGGTCCACCTCGTCCTGCGCAGGCTTCTCCAAGAGCAGCACCAGCTCTCTAGCAGAAGTGAGGAAAGGGGCAAGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411702.7
ENST00000558116.5
CDS CAA 90 bp AGCCTGCTTGCGCTGCCGTTGTGCTGTGTGATCCCCGCCCAGCCCTaGCCCCTTTCCTCACTTCTGCTAGAGAGCTGGTGCTGCTCTTGG +
Preference number: 6 (lower is better)
Translates to: SLLALPLCCVIPAQP*PLSSLLLESWCCSW
Trigger: CCAAGAGCAGCACCAGCTCTCTAGCAGAAGTGAGGAAAGGGGCAAGGGCTGGGCGGGGATCACACAGCACAACGGCAGCGCAAGCAGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000411702.7
ENST00000558116.5
CDS CAA 90 bp GACTGGGCTTCAGGGTGTTTCTTGTCAGCATCTCCGTGCAGGCCATaGCGGCAAATGCGTCCAGGGTCTGGGGAGACGGACAGCAGGGCG +
Preference number: 6 (lower is better)
Translates to: DWASGCFLSASPCRP*RQMRPGSGETDSRA
Trigger: CGCCCTGCTGTCCGTCTCCCCAGACCCTGGACGCATTTGCCGCAATGGCCTGCACGGAGATGCTGACAAGAAACACCCTGAAGCCCAGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558488.1
CDS TCA 72 bp CTTGGCGAGGGAGGAGGGTGCCCACTTCCCAATCTCTaGGTTAGCGGAGGAGCTGAGACCCAGCGGGTGCTT +
Preference number: 6 (lower is better)
Translates to: LGEGGGCPLPNL*VSGGAETQRVL
Trigger: AAGCACCCGCTGGGTCTCAGCTCCTCCGCTAACTCAGAGATTGGGAAGTGGGCACCCTCCTCCCTCGCCAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319921.4
CDS TCA 72 bp GCATCGTTAGGGCGGCATCACTCGGGGGCTGCTTCCTaGGCTCAGTGCTCAGGTAAACCAGCTGCTCTGCCG +
Preference number: 6 (lower is better)
Translates to: ASLGRHHSGAAS*AQCSGKPAALP
Trigger: CGGCAGAGCAGCTGGTTTACCTGAGCACTGAGCTCAGGAAGCAGCCCCCGAGTGATGCCGCCCTAACGATGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS GCA 72 bp TGGGGGCTGCAGGAGGCAGCCTCTCTCCGCACTGGCTaGAGAACTTGGGGGTTTCCTCCTTGGAGACATGCT +
Preference number: 6 (lower is better)
Translates to: WGLQEAASLRTG*RTWGFPPWRHA
Trigger: AGCATGTCTCCAAGGAGGAAACCCCCAAGTTCTGCAGCCAGTGCGGAGAGAGGCTGCCTCCTGCAGCCCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000319921.4
ENST00000508628.6
ENST00000582970.5
CDS GCA 72 bp CAGGAGGCTTTGGAACAGGGCTCCTCGGGGTTTTCTTaGCAACTGTCTGAGCCCGGGAACAAGCACGGGCCC +
Preference number: 6 (lower is better)
Translates to: QEALEQGSSGFS*QLSEPGNKHGP
Trigger: GGGCCCGTGCTTGTTCCCGGGCTCAGACAGTTGGCAAGAAAACCCCGAGGAGCCCTGTTCCAAAGCCTCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319921.4
ENST00000508628.6
ENST00000582970.5
CDS GCA 72 bp GCAGGGCGCCCAGCCAGGTGTACGTCCTTGTGTCCATaGATCTTTGGCACAGGTTCACCAGGTACAGCCGCC +
Preference number: 6 (lower is better)
Translates to: AGRPARCTSLCP*IFGTGSPGTAA
Trigger: GGCGGCTGTACCTGGTGAACCTGTGCCAAAGATGCATGGACACAAGGACGTACACCTGGCTGGGCGCCCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319921.4
ENST00000508628.6
ENST00000559070.5
ENST00000574060.1
ENST00000582970.5
CDS GCA 72 bp CGCTGGCTGCTGAGCTTCCGCACCAGGTACACCCGGTaGCAGTCGTTCTCCACCCGGATACAGAACTGCTTG +
Preference number: 6 (lower is better)
Translates to: RWLLSFRTRYTR*QSFSTRIQNCL
Trigger: CAAGCAGTTCTGTATCCGGGTGGAGAACGACTGGCACCGGGTGTACCTGGTGCGGAAGCTCAGCAGCCAGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411702.7
ENST00000508628.6
ENST00000558116.5
ENST00000582970.5
CDS GCA 72 bp GCAACAGTGCCACCTCCTCAAAGGTGGTTGCCGGGGTaGAGAGCAGCACCTCATCGTAAGTGGGCAGGGGCT +
Preference number: 6 (lower is better)
Translates to: ATVPPPQRWLPG*RAAPHRKWAGA
Trigger: AGCCCCTGCCCACTTACGATGAGGTGCTGCTCTGCACCCCGGCAACCACCTTTGAGGAGGTGGCACTGTTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS GCA 72 bp CTCTCGTTCTGGTCTCTGAGCATGCCCACGGCGCTCTaGACACAGCTTCTCAGCAGCCTGGTGGTGTCCAGG +
Preference number: 6 (lower is better)
Translates to: LSFWSLSMPTAL*TQLLSSLVVSR
Trigger: CCTGGACACCACCAGGCTGCTGAGAAGCTGTGTGCAGAGCGCCGTGGGCATGCTCAGAGACCAGAACGAGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS GCA 72 bp ATGACAGCCTGGGCCAGGCTCCCGCTGCCTTGCATGTaGTCATCGGAGCAGATGAGCTCCAGCGGCATGGAA +
Preference number: 6 (lower is better)
Translates to: MTAWARLPLPCM*SSEQMSSSGME
Trigger: TTCCATGCCGCTGGAGCTCATCTGCTCCGATGAGCACATGCAAGGCAGCGGGAGCCTGGCCCAGGCTGTCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000508628.6
ENST00000558116.5
ENST00000558488.1
ENST00000559603.1
ENST00000582970.5
CDS GCA 72 bp TCTTGTCAGCATCTCCGTGCAGGCCATTGCGGCAAATaGGTCCAGGGTCTGGGGAGACGGACAGCAGGGCGT +
Preference number: 6 (lower is better)
Translates to: SCQHLRAGHCGK*VQGLGRRTAGR
Trigger: ACGCCCTGCTGTCCGTCTCCCCAGACCCTGGACGCATTTGCCGCAATGGCCTGCACGGAGATGCTGACAAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558488.1
CDS CCA 72 bp GGGCCACCTCTTGCAGGTATTCAACCGAGGCCTCGTTaGCAGGCTCTCGGCCCCGGCTTGCTGGAGAATATG +
Preference number: 6 (lower is better)
Translates to: GPPLAGIQPRPR*QALGPGLLENM
Trigger: CATATTCTCCAGCAAGCCGGGGCCGAGAGCCTGCCAACGAGGCCTCGGTTGAATACCTGCAAGAGGTGGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411702.7
ENST00000508628.6
ENST00000558116.5
ENST00000582970.5
CDS CCA 72 bp TCCATCGGCCTGCCACACTCTCCCACGGAGCAAGGATaGCCGTTGGGACAAGTGTACCAGTGGACTCGCTCC +
Preference number: 6 (lower is better)
Translates to: SIGLPHSPTEQG*PLGQVYQWTRS
Trigger: GGAGCGAGTCCACTGGTACACTTGTCCCAACGGCCATCCTTGCTCCGTGGGAGAGTGTGGCAGGCCGATGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411702.7
ENST00000508628.6
ENST00000558116.5
ENST00000582970.5
CDS CCA 72 bp CTGGCTTGGGGTTTGCATGTAGACAGCCAGGGCGGCTaGCAACACCTCGGAGTGGCCACAGACGACGAGGTT +
Preference number: 6 (lower is better)
Translates to: LAWGLHVDSQGG*QHLGVATDDEV
Trigger: AACCTCGTCGTCTGTGGCCACTCCGAGGTGTTGCCAGCCGCCCTGGCTGTCTACATGCAAACCCCAAGCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS CCA 72 bp GAGCAGCACCTCATCGTAAGTGGGCAGGGGCTGGCTTaGGGTTTGCATGTAGACAGCCAGGGCGGCTGGCAA +
Preference number: 6 (lower is better)
Translates to: EQHLIVSGQGLA*GLHVDSQGGWQ
Trigger: TTGCCAGCCGCCCTGGCTGTCTACATGCAAACCCCAAGCCAGCCCCTGCCCACTTACGATGAGGTGCTGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS CCA 72 bp TGCGGAAGAGATCTGAGTAGGCAGCCGGGCCCTGCATaGCGTCTGCCACGATGGTCTTGGCGAGAGACTTGG +
Preference number: 6 (lower is better)
Translates to: CGRDLSRQPGPA*RLPRWSWRETW
Trigger: CCAAGTCTCTCGCCAAGACCATCGTGGCAGACGCCATGCAGGGCCCGGCTGCCTACTCAGATCTCTTCCGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS CCA 72 bp TGCCCACGGCGCTCTGCACACAGCTTCTCAGCAGCCTaGTGGTGTCCAGGATCGACACATCACTGCCTCCGA +
Preference number: 6 (lower is better)
Translates to: CPRRSAHSFSAA*WCPGSTHHCLR
Trigger: TCGGAGGCAGTGATGTGTCGATCCTGGACACCACCAGGCTGCTGAGAAGCTGTGTGCAGAGCGCCGTGGGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS CCA 72 bp ACCACCCTCCGCATATTGCGCGTGCAGCTCTCGTTCTaGTCTCTGAGCATGCCCACGGCGCTCTGCACACAG +
Preference number: 6 (lower is better)
Translates to: TTLRILRVQLSF*SLSMPTALCTQ
Trigger: CTGTGTGCAGAGCGCCGTGGGCATGCTCAGAGACCAGAACGAGAGCTGCACGCGCAATATGCGGAGGGTGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS CAA 72 bp CGGGCCACCTCTTGCAGGTATTCAACCGAGGCCTCGTaGGCAGGCTCTCGGCCCCGGCTTGCTGGAGAATAT +
Preference number: 6 (lower is better)
Translates to: RATSCRYSTEAS*AGSRPRLAGEY
Trigger: ATATTCTCCAGCAAGCCGGGGCCGAGAGCCTGCCAACGAGGCCTCGGTTGAATACCTGCAAGAGGTGGCCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411702.7
ENST00000508628.6
ENST00000558116.5
ENST00000582970.5
CDS CAA 72 bp AGAGCAGCACCTCATCGTAAGTGGGCAGGGGCTGGCTaGGGGTTTGCATGTAGACAGCCAGGGCGGCTGGCA +
Preference number: 6 (lower is better)
Translates to: RAAPHRKWAGAG*GFACRQPGRLA
Trigger: TGCCAGCCGCCCTGGCTGTCTACATGCAAACCCCAAGCCAGCCCCTGCCCACTTACGATGAGGTGCTGCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS CAA 72 bp AGCGGCGCAGCAACAGTGCCACCTCCTCAAAGGTGGTaGCCGGGGTGCAGAGCAGCACCTCATCGTAAGTGG +
Preference number: 6 (lower is better)
Translates to: SGAATVPPPQRW*PGCRAAPHRKW
Trigger: CCACTTACGATGAGGTGCTGCTCTGCACCCCGGCAACCACCTTTGAGGAGGTGGCACTGTTGCTGCGCCGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS CAA 90 bp AGGCAGGGCGCCCAGCCAGGTGTACGTCCTTGTGTCCATGCATCTTaGGCACAGGTTCACCAGGTACAGCCGCCAGCTCTGAGGTATCCC +
Preference number: 6 (lower is better)
Translates to: RQGAQPGVRPCVHAS*AQVHQVQPPALRYP
Trigger: GGGATACCTCAGAGCTGGCGGCTGTACCTGGTGAACCTGTGCCAAAGATGCATGGACACAAGGACGTACACCTGGCTGGGCGCCCTGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319921.4
ENST00000508628.6
ENST00000559070.5
ENST00000574060.1
ENST00000582970.5
CDS CAA 90 bp TACAGCAGTGCAGGACAGGCAGGGCGCCCAGCCAGGTGTACGTCCTaGTGTCCATGCATCTTTGGCACAGGTTCACCAGGTACAGCCGCC +
Preference number: 6 (lower is better)
Translates to: YSSAGQAGRPARCTS*CPCIFGTGSPGTAA
Trigger: GGCGGCTGTACCTGGTGAACCTGTGCCAAAGATGCATGGACACAAGGACGTACACCTGGCTGGGCGCCCTGCCTGTCCTGCACTGCTGTA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319921.4
ENST00000508628.6
ENST00000559070.5
ENST00000574060.1
ENST00000582970.5
CDS CAA 90 bp ACCCAGCAGATGAACTCCTTTCTCAGGGACAGAGCCTGCAGCCCCTaGCACCGGGCCTCGCTGATGTCCTGGAGCAGCTTTTTGGCCTGG +
Preference number: 6 (lower is better)
Translates to: TQQMNSFLRDRACSP*HRASLMSWSSFLAW
Trigger: CCAGGCCAAAAAGCTGCTCCAGGACATCAGCGAGGCCCGGTGCAAGGGGCTGCAGGCTCTGTCCCTGAGAAAGGAGTTCATCTGCTGGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000508628.6
ENST00000559070.5
ENST00000582970.5
CDS CAA 90 bp CCTTGGACTCGGTCCTGGACGAGGATGTCTGAGGAGCAGATGCCCTaGGCGCTCTCTATGAGCTCTGTCTCGTTGGGGCTGCCACGTGAC +
Preference number: 6 (lower is better)
Translates to: PWTRSWTRMSEEQMP*ALSMSSVSLGLPRD
Trigger: GTCACGTGGCAGCCCCAACGAGACAGAGCTCATAGAGAGCGCCAAGGGCATCTGCTCCTCAGACATCCTCGTCCAGGACCGAGTCCAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS CAA 90 bp TCATCCTCATTCAAGAGGCCCAGGAGGAGCACCACCCTCCGCATATaGCGCGTGCAGCTCTCGTTCTGGTCTCTGAGCATGCCCACGGCG +
Preference number: 6 (lower is better)
Translates to: SSSFKRPRRSTTLRI*RVQLSFWSLSMPTA
Trigger: CGCCGTGGGCATGCTCAGAGACCAGAACGAGAGCTGCACGCGCAATATGCGGAGGGTGGTGCTCCTCCTGGGCCTCTTGAATGAGGATGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS TCA 72 bp AGCAGGATCGATTTGGCCTCCTCAGACACCTTCTGGTaGAGTTCCTCCGTCAAGGCCCGGGGACCCTGCCTC +
Preference number: 6 (lower is better)
Translates to: SRIDLASSDTFW*SSSVKARGPCL
Trigger: GAGGCAGGGTCCCCGGGCCTTGACGGAGGAACTTCACCAGAAGGTGTCTGAGGAGGCCAAATCGATCCTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS GCA 72 bp CCCTTGCCCCTTTCCTCACTTCTGCTAGAGAGCTGGTaGTGCTCTTGGAGAAGCCTGCGCAGGACGAGGTGG +
Preference number: 6 (lower is better)
Translates to: PLPLSSLLLESW*CSWRSLRRTRW
Trigger: CCACCTCGTCCTGCGCAGGCTTCTCCAAGAGCAGCACCAGCTCTCTAGCAGAAGTGAGGAAAGGGGCAAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411702.7
ENST00000558116.5
CDS GCA 72 bp AACTCGGGGACGCGGCTCTCGGTTCCTAGGAGCACGTaGTCCACGAAGAGTGCGGTGGAGAAAATCCGACTC +
Preference number: 6 (lower is better)
Translates to: NSGTRLSVPRST*STKSAVEKIRL
Trigger: GAGTCGGATTTTCTCCACCGCACTCTTCGTGGAGCACGTGCTCCTAGGAACCGAGAGCCGCGTCCCCGAGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000508628.6
ENST00000558116.5
ENST00000558488.1
ENST00000559603.1
ENST00000582970.5
CDS GCA 72 bp CCTCCCACCGGCCCACCAGAGGCCCCGGCTGTTAGCTaGATGTATACTTGTGTCCCAGGCTTGCGACCTAAA +
Preference number: 6 (lower is better)
Translates to: PPTGPPEAPAVS*MYTCVPGLRPK
Trigger: TTTAGGTCGCAAGCCTGGGACACAAGTATACATGCAGCTAACAGCCGGGGCCTCTGGTGGGCCGGTGGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558488.1
CDS GCA 72 bp GCACCTGCACTCCGGAGGGGTGAGCAGACAGCCTGCTaGCACGACTTACCTCCTGAGCCCAGAAGTGAAGAT +
Preference number: 6 (lower is better)
Translates to: APALRRGEQTAC*HDLPPEPRSED
Trigger: ATCTTCACTTCTGGGCTCAGGAGGTAAGTCGTGGCAGCAGGCTGTCTGCTCACCCCTCCGGAGTGCAGGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573548.1
CDS GCA 72 bp TTGGCACCTGCACTCCGGAGGGGTGAGCAGACAGCCTaGTGCCACGACTTACCTCCTGAGCCCAGAAGTGAA +
Preference number: 6 (lower is better)
Translates to: LAPALRRGEQTA*CHDLPPEPRSE
Trigger: TTCACTTCTGGGCTCAGGAGGTAAGTCGTGGCAGCAGGCTGTCTGCTCACCCCTCCGGAGTGCAGGTGCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573548.1
CDS CCA 72 bp CCTCCTTGGAGACATGCTGGCACGAAGGACACTCCATaGGTCCTGCTGGGACTGCCCTGCAGATCCAGAAGC +
Preference number: 6 (lower is better)
Translates to: PPWRHAGTKDTP*VLLGLPCRSRS
Trigger: GCTTCTGGATCTGCAGGGCAGTCCCAGCAGGACCCATGGAGTGTCCTTCGTGCCAGCATGTCTCCAAGGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319921.4
ENST00000508628.6
ENST00000582970.5
CDS CCA 72 bp TTCATCGCCGTACACCAGGTACCTATCCATCTGGCCTaGGTGGTCCTGCCGCAGCCCCTGCTGCTTGACAAC +
Preference number: 6 (lower is better)
Translates to: FIAVHQVPIHLA*VVLPQPLLLDN
Trigger: GTTGTCAAGCAGCAGGGGCTGCGGCAGGACCACCCAGGCCAGATGGATAGGTACCTGGTGTACGGCGATGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000411702.7
ENST00000508628.6
ENST00000558116.5
ENST00000573038.1
ENST00000582970.5
CDS CCA 72 bp GAGAGCGGTAGCACAGAGGCCCAGGCCCCGTCGGCGTaGCAAGAGGATCTCAAACTCAGTGTCCAGATCCAA +
Preference number: 6 (lower is better)
Translates to: ESGSTEAQAPSA*QEDLKLSVQIQ
Trigger: TTGGATCTGGACACTGAGTTTGAGATCCTCTTGCCACGCCGACGGGGCCTGGGCCTCTGTGCTACCGCTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000411702.7
ENST00000427003.7
ENST00000508628.6
ENST00000570776.1
ENST00000582970.5
CDS CCA 72 bp TCCTGCACGGTCTCTCTGCCCTCCTCCACCTGGTACTaGCAGTTGGAGAGAATCAGTGGAGTCAGGTCCCGC +
Preference number: 6 (lower is better)
Translates to: SCTVSLPSSTWY*QLERISGVRSR
Trigger: GCGGGACCTGACTCCACTGATTCTCTCCAACTGCCAGTACCAGGTGGAGGAGGGCAGAGAGACCGTGCAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000411702.7
ENST00000427003.7
ENST00000508628.6
ENST00000560083.1
ENST00000582970.5
CDS CAA 72 bp GCAGGACAGGCAGGGCGCCCAGCCAGGTGTACGTCCTaGTGTCCATGCATCTTTGGCACAGGTTCACCAGGT +
Preference number: 6 (lower is better)
Translates to: AGQAGRPARCTS*CPCIFGTGSPG
Trigger: ACCTGGTGAACCTGTGCCAAAGATGCATGGACACAAGGACGTACACCTGGCTGGGCGCCCTGCCTGTCCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319921.4
ENST00000508628.6
ENST00000559070.5
ENST00000574060.1
ENST00000582970.5
CDS CAA 72 bp CCTTTCCTCACTTCTGCTAGAGAGCTGGTGCTGCTCTaGGAGAAGCCTGCGCAGGACGAGGTGGACCACGCC +
Preference number: 6 (lower is better)
Translates to: PFLTSARELVLL*EKPAQDEVDHA
Trigger: GGCGTGGTCCACCTCGTCCTGCGCAGGCTTCTCCAAGAGCAGCACCAGCTCTCTAGCAGAAGTGAGGAAAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411702.7
ENST00000558116.5
CDS CAA 72 bp CGGTCCTGGACGAGGATGTCTGAGGAGCAGATGCCCTaGGCGCTCTCTATGAGCTCTGTCTCGTTGGGGCTG +
Preference number: 6 (lower is better)
Translates to: RSWTRMSEEQMP*ALSMSSVSLGL
Trigger: CAGCCCCAACGAGACAGAGCTCATAGAGAGCGCCAAGGGCATCTGCTCCTCAGACATCCTCGTCCAGGACCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS CAA 72 bp CCGCCTCCTGGAGAGCGTCCTGGTTGCAGGCTTCCCTaGCCAACCACTCCAGAGGGTGAAACTGGCTCTCTT +
Preference number: 6 (lower is better)
Translates to: PPPGERPGCRLP*PTTPEGETGSL
Trigger: AAGAGAGCCAGTTTCACCCTCTGGAGTGGTTGGCAAGGGAAGCCTGCAACCAGGACGCTCTCCAGGAGGCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000508628.6
ENST00000558116.5
ENST00000560694.1
ENST00000582970.5
CDS CAA 90 bp CACCCGGTGCCAGTCGTTCTCCACCCGGATACAGAACTGCTTGACTaGCTGCAGGTAGCACTGCTTCTCCTTGGCCATCTCTGGGCCTCC +
Preference number: 6 (lower is better)
Translates to: HPVPVVLHPDTELLD*LQVALLLLGHLWAS
Trigger: GGAGGCCCAGAGATGGCCAAGGAGAAGCAGTGCTACCTGCAGCAAGTCAAGCAGTTCTGTATCCGGGTGGAGAACGACTGGCACCGGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411702.7
ENST00000508628.6
ENST00000558116.5
ENST00000582970.5
CDS CAA 90 bp TGCAGCCCCTTGCACCGGGCCTCGCTGATGTCCTGGAGCAGCTTTTaGGCCTGGATGAGCTCCTGGTTGATCTGGTCCAGTGTTTCACGG +
Preference number: 6 (lower is better)
Translates to: CSPLHRASLMSWSSF*AWMSSWLIWSSVSR
Trigger: CCGTGAAACACTGGACCAGATCAACCAGGAGCTCATCCAGGCCAAAAAGCTGCTCCAGGACATCAGCGAGGCCCGGTGCAAGGGGCTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000508628.6
ENST00000559070.5
ENST00000582970.5
CDS CAA 90 bp TCACCAACTGTAGCCACGCCTGGGGACTGGGCTTCAGGGTGTTTCTaGTCAGCATCTCCGTGCAGGCCATTGCGGCAAATGCGTCCAGGG +
Preference number: 6 (lower is better)
Translates to: SPTVATPGDWASGCF*SASPCRPLRQMRPG
Trigger: CCCTGGACGCATTTGCCGCAATGGCCTGCACGGAGATGCTGACAAGAAACACCCTGAAGCCCAGTCCCCAGGCGTGGCTACAGTTGGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000508628.6
ENST00000558116.5
ENST00000558488.1
ENST00000582970.5
CDS TCA 72 bp GTGTGGACGACACGTGCTCCCAGCATGGTAGGGGAATaGCCTACGGGGCTGACTTCGGAACTGAAGACTCCC +
Preference number: 6 (lower is better)
Translates to: VWTTRAPSMVGE*PTGLTSELKTP
Trigger: GGGAGTCTTCAGTTCCGAAGTCAGCCCCGTAGGTCATTCCCCTACCATGCTGGGAGCACGTGTCGTCCACAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000411702.7
ENST00000558116.5
CDS TCA 72 bp GGCTTGCCCTGGAGGAAGCGGCTGACGATCTGCCGCTaGATCTTCTCCAGATCGAACTCCTGCACGGTCTCT +
Preference number: 6 (lower is better)
Translates to: GLPWRKRLTICR*IFSRSNSCTVS
Trigger: AGAGACCGTGCAGGAGTTCGATCTGGAGAAGATTCAGCGGCAGATCGTCAGCCGCTTCCTCCAGGGCAAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000411702.7
ENST00000427003.7
ENST00000508628.6
ENST00000560083.1
ENST00000582970.5
CDS TCA 72 bp GGCAGCAGGGCGCCCAGGACTCGGCTCTCATCCACCTaGGGGTCGATCAGTCGAATTGTTTTCAGAGGCACA +
Preference number: 6 (lower is better)
Translates to: GSRAPRTRLSST*GSISRIVFRGT
Trigger: TGTGCCTCTGAAAACAATTCGACTGATCGACCCTCAGGTGGATGAGAGCCGAGTCCTGGGCGCCCTGCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS TCA 72 bp GCGTGGCGCTCCAGGTCTGCCGTGTGCAGGTGTGCCTaGAGGAAATCTGCAAAGGAGTTGTGCCTCTGTCTG +
Preference number: 6 (lower is better)
Translates to: AWRSRSAVCRCA*RKSAKELCLCL
Trigger: CAGACAGAGGCACAACTCCTTTGCAGATTTCCTTCAGGCACACCTGCACACGGCAGACCTGGAGCGCCACGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS TCA 72 bp TCCGCATATTGCGCGTGCAGCTCTCGTTCTGGTCTCTaGGCATGCCCACGGCGCTCTGCACACAGCTTCTCA +
Preference number: 6 (lower is better)
Translates to: SAYCACSSRSGL*ACPRRSAHSFS
Trigger: TGAGAAGCTGTGTGCAGAGCGCCGTGGGCATGCTCAGAGACCAGAACGAGAGCTGCACGCGCAATATGCGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS GCA 72 bp GGAGACATGCTGGCACGAAGGACACTCCATGGGTCCTaGTGGGACTGCCCTGCAGATCCAGAAGCAAGAGCA +
Preference number: 6 (lower is better)
Translates to: GDMLARRTLHGS*WDCPADPEARA
Trigger: TGCTCTTGCTTCTGGATCTGCAGGGCAGTCCCAGCAGGACCCATGGAGTGTCCTTCGTGCCAGCATGTCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319921.4
ENST00000508628.6
ENST00000582970.5
CDS GCA 72 bp CATTCCATGTCTCCCAGCAACGACTCCTTCCAGCCATaGTCCGCGGGGAATTGGATTTCCACCAGCCGCCTC +
Preference number: 6 (lower is better)
Translates to: HSMSPSNDSFQP*SAGNWISTSRL
Trigger: GAGGCGGCTGGTGGAAATCCAATTCCCCGCGGAGCATGGCTGGAAGGAGTCGTTGCTGGGAGACATGGAATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319921.4
ENST00000508628.6
ENST00000559070.5
ENST00000582970.5
CDS GCA 72 bp AACCGAGGCCTCGTTGGCAGGCTCTCGGCCCCGGCTTaGTGGAGAATATGCCTTAAGGAAACGACCTTCCTC +
Preference number: 6 (lower is better)
Translates to: NRGLVGRLSAPA*WRICLKETTFL
Trigger: GAGGAAGGTCGTTTCCTTAAGGCATATTCTCCAGCAAGCCGGGGCCGAGAGCCTGCCAACGAGGCCTCGGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411702.7
ENST00000508628.6
ENST00000558116.5
ENST00000582970.5
CDS GCA 72 bp CAATGCCTCCAATCGGCGCATGGCAGTCAATGCAGATaGTCTGTTCCATCGGCCTGCCACACTCTCCCACGG +
Preference number: 6 (lower is better)
Translates to: QCLQSAHGSQCR*SVPSACHTLPR
Trigger: CCGTGGGAGAGTGTGGCAGGCCGATGGAACAGAGCATCTGCATTGACTGCCATGCGCCGATTGGAGGCATTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000411702.7
ENST00000508628.6
ENST00000558116.5
ENST00000574909.1
ENST00000582970.5
CDS GCA 72 bp TTGCCCCTTTCCTCACTTCTGCTAGAGAGCTGGTGCTaGTCTTGGAGAAGCCTGCGCAGGACGAGGTGGACC +
Preference number: 6 (lower is better)
Translates to: LPLSSLLLESWC*SWRSLRRTRWT
Trigger: GGTCCACCTCGTCCTGCGCAGGCTTCTCCAAGAGCAGCACCAGCTCTCTAGCAGAAGTGAGGAAAGGGGCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411702.7
ENST00000558116.5
CDS GCA 72 bp ACAGAGCAGCTCCTTCCAGCCTCTGGGCAAGCAGAGTaGTTCCTTTTTCCAGCCCCAGGCATCGCCTTCCCT +
Preference number: 6 (lower is better)
Translates to: TEQLLPASGQAE*FLFPAPGIAFP
Trigger: AGGGAAGGCGATGCCTGGGGCTGGAAAAAGGAAGCACTCTGCTTGCCCAGAGGCTGGAAGGAGCTGCTCTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000411702.7
ENST00000558116.5
CDS GCA 72 bp GATCCTTTGACACGCACGCTCTGTGTGGACGACACGTaGTCCCAGCATGGTAGGGGAATGACCTACGGGGCT +
Preference number: 6 (lower is better)
Translates to: DPLTRTLCVDDT*SQHGRGMTYGA
Trigger: AGCCCCGTAGGTCATTCCCCTACCATGCTGGGAGCACGTGTCGTCCACACAGAGCGTGCGTGTCAAAGGATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000411702.7
ENST00000558116.5
CDS GCA 72 bp GCTCTGTCTCGTTGGGGCTGCCACGTGACACAAAAATaGCCCGGTTCATCTTGGCAGGGTCAAGGGCCCAGT +
Preference number: 6 (lower is better)
Translates to: ALSRWGCHVTQK*PGSSWQGQGPS
Trigger: ACTGGGCCCTTGACCCTGCCAAGATGAACCGGGGCATTTTTGTGTCACGTGGCAGCCCCAACGAGACAGAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS GCA 72 bp GACTGGGCTTCAGGGTGTTTCTTGTCAGCATCTCCGTaGAGGCCATTGCGGCAAATGCGTCCAGGGTCTGGG +
Preference number: 6 (lower is better)
Translates to: DWASGCFLSASP*RPLRQMRPGSG
Trigger: CCCAGACCCTGGACGCATTTGCCGCAATGGCCTGCACGGAGATGCTGACAAGAAACACCCTGAAGCCCAGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558488.1
CDS CCA 72 bp CTCCGCACTGGCTGCAGAACTTGGGGGTTTCCTCCTTaGAGACATGCTGGCACGAAGGACACTCCATGGGTC +
Preference number: 6 (lower is better)
Translates to: LRTGCRTWGFPP*RHAGTKDTPWV
Trigger: GACCCATGGAGTGTCCTTCGTGCCAGCATGTCTCCAAGGAGGAAACCCCCAAGTTCTGCAGCCAGTGCGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000319921.4
ENST00000508628.6
ENST00000582970.5
CDS CCA 72 bp GAGCTGAGACCCAGCGGGTGCTTCATAGCCCTTAGCTaGGTCATGGCAGAACACAGCTGTGAGCCCGAATCC +
Preference number: 6 (lower is better)
Translates to: ELRPSGCFIALS*VMAEHSCEPES
Trigger: GGATTCGGGCTCACAGCTGTGTTCTGCCATGACCCAGCTAAGGGCTATGAAGCACCCGCTGGGTCTCAGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319921.4
CDS CCA 72 bp CGAGGCCTCGTTGGCAGGCTCTCGGCCCCGGCTTGCTaGAGAATATGCCTTAAGGAAACGACCTTCCTCTTC +
Preference number: 6 (lower is better)
Translates to: RGLVGRLSAPAC*RICLKETTFLF
Trigger: GAAGAGGAAGGTCGTTTCCTTAAGGCATATTCTCCAGCAAGCCGGGGCCGAGAGCCTGCCAACGAGGCCTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411702.7
ENST00000508628.6
ENST00000558116.5
ENST00000582970.5
CDS CCA 72 bp GCCCAGTTGGAGATGCCCACGAAGCCGACCTTTTTGTaGGGGGCGGGATCGTCTTCAATGCATCCGTCTTCC +
Preference number: 6 (lower is better)
Translates to: AQLEMPTKPTFL*GAGSSSMHPSS
Trigger: GGAAGACGGATGCATTGAAGACGATCCCGCCCCCCACAAAAAGGTCGGCTTCGTGGGCATCTCCAACTGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS CCA 72 bp GGCTGCCACGTGACACAAAAATGCCCCGGTTCATCTTaGCAGGGTCAAGGGCCCAGTTGGAGATGCCCACGA +
Preference number: 6 (lower is better)
Translates to: GCHVTQKCPGSS*QGQGPSWRCPR
Trigger: TCGTGGGCATCTCCAACTGGGCCCTTGACCCTGCCAAGATGAACCGGGGCATTTTTGTGTCACGTGGCAGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS CCA 72 bp TTGGCTGAGTGGCCACTGTTGCTGGACACCACTGCGTaGCCACAGAGGGGCATCACTGTAGGGTCACAGGTT +
Preference number: 6 (lower is better)
Translates to: LAEWPLLLDTTA*PQRGITVGSQV
Trigger: AACCTGTGACCCTACAGTGATGCCCCTCTGTGGCCACGCAGTGGTGTCCAGCAACAGTGGCCACTCAGCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559603.1
CDS CCA 72 bp TTGGGCGCACGGTGTGCAGGCAGTTCCTGGAGGCCATaGAGACACACAGGTCTACCTATCAGTACCCGCATG +
Preference number: 6 (lower is better)
Translates to: LGARCAGSSWRP*RHTGLPISTRM
Trigger: CATGCGGGTACTGATAGGTAGACCTGTGTGTCTCCATGGCCTCCAGGAACTGCCTGCACACCGTGCGCCCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560083.1
ENST00000573919.1
CDS CCA 72 bp TCCATCGGCCTGCCACACTCTCCCACGGAGCAAGGATaGCCGTTGGGACAAGCTGTGAAGAGAACAGGACAC +
Preference number: 6 (lower is better)
Translates to: SIGLPHSPTEQG*PLGQAVKRTGH
Trigger: GTGTCCTGTTCTCTTCACAGCTTGTCCCAACGGCCATCCTTGCTCCGTGGGAGAGTGTGGCAGGCCGATGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574909.1
CDS CAA 72 bp GCCCAGCCAGGTGTACGTCCTTGTGTCCATGCATCTTaGGCACAGGTTCACCAGGTACAGCCGCCAGCTCTG +
Preference number: 6 (lower is better)
Translates to: AQPGVRPCVHAS*AQVHQVQPPAL
Trigger: CAGAGCTGGCGGCTGTACCTGGTGAACCTGTGCCAAAGATGCATGGACACAAGGACGTACACCTGGCTGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319921.4
ENST00000508628.6
ENST00000559070.5
ENST00000574060.1
ENST00000582970.5
CDS CAA 72 bp TTCAAGAGGCCCAGGAGGAGCACCACCCTCCGCATATaGCGCGTGCAGCTCTCGTTCTGGTCTCTGAGCATG +
Preference number: 6 (lower is better)
Translates to: FKRPRRSTTLRI*RVQLSFWSLSM
Trigger: CATGCTCAGAGACCAGAACGAGAGCTGCACGCGCAATATGCGGAGGGTGGTGCTCCTCCTGGGCCTCTTGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS CAA 72 bp GTAGCCACGCCTGGGGACTGGGCTTCAGGGTGTTTCTaGTCAGCATCTCCGTGCAGGCCATTGCGGCAAATG +
Preference number: 6 (lower is better)
Translates to: VATPGDWASGCF*SASPCRPLRQM
Trigger: CATTTGCCGCAATGGCCTGCACGGAGATGCTGACAAGAAACACCCTGAAGCCCAGTCCCCAGGCGTGGCTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000508628.6
ENST00000558116.5
ENST00000558488.1
ENST00000582970.5
CDS CAA 72 bp TCAGGGTGTTTCTTGTCAGCATCTCCGTGCAGGCCATaGCGGCAAATGCGTCCAGGGTCTGGGGAGACGGAC +
Preference number: 6 (lower is better)
Translates to: SGCFLSASPCRP*RQMRPGSGETD
Trigger: GTCCGTCTCCCCAGACCCTGGACGCATTTGCCGCAATGGCCTGCACGGAGATGCTGACAAGAAACACCCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558488.1
CDS CAA 90 bp GGCACGCTGGCGGCCTCAAGCGGGGCTGCATCCTGCTTCCTTCTCTaGCTGGGTATGGCATTAGCAGCTTCCCATTCATCGGATATGAGG +
Preference number: 6 (lower is better)
Translates to: GTLAASSGAASCFLL*LGMALAASHSSDMR
Trigger: CCTCATATCCGATGAATGGGAAGCTGCTAATGCCATACCCAGCAAGAGAAGGAAGCAGGATGCAGCCCCGCTTGAGGCCGCCAGCGTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508628.6
CDS CAA 90 bp TTCTCGGTGCTGCTGCGTGCACAGATTGTGGAAAAGCTCCTCCGCTaGGCGTGCCACCTCGTAGCTCAGCTGATCTGCGAACAGCAGGCT +
Preference number: 6 (lower is better)
Translates to: FSVLLRAQIVEKLLR*ACHLVAQLICEQQA
Trigger: AGCCTGCTGTTCGCAGATCAGCTGAGCTACGAGGTGGCACGCCAAGCGGAGGAGCTTTTCCACAATCTGTGCACGCAGCAGCACCGAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS CAA 90 bp CCACGGGCCCATCCTACCTTCAGAGCAGTCTTAATGCCCAGTGGCTaGCACTCGAGGACAGCTTTGGCCACAGCATCACGGAGAGCCTTG +
Preference number: 6 (lower is better)
Translates to: PRAHPTFRAVLMPSG*HSRTALATASRRAL
Trigger: CAAGGCTCTCCGTGATGCTGTGGCCAAAGCTGTCCTCGAGTGCAAGCCACTGGGCATTAAGACTGCTCTGAAGGTAGGATGGGCCCGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573038.1
CDS CAA 90 bp GGCTTGCACTCGAGGACAGCTTTGGCCACAGCATCACGGAGAGCCTaGTATTCATCGCCGTACACCAGGTACCTATCCATCTGGCCTGGG +
Preference number: 6 (lower is better)
Translates to: GLHSRTALATASRRA*YSSPYTRYLSIWPG
Trigger: CCCAGGCCAGATGGATAGGTACCTGGTGTACGGCGATGAATACAAGGCTCTCCGTGATGCTGTGGCCAAAGCTGTCCTCGAGTGCAAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000411702.7
ENST00000508628.6
ENST00000558116.5
ENST00000573038.1
ENST00000582970.5
CDS CAA 90 bp TCTTCCCAGCCATTTCTTGGACCTGGGAGCTCAGGTGGTAATGCGTaGCCCTCTGCGAGTTCGAGGAGGTGGACAGTCTCACTGTCACGG +
Preference number: 6 (lower is better)
Translates to: SSQPFLGPGSSGGNA*PSASSRRWTVSLSR
Trigger: CCGTGACAGTGAGACTGTCCACCTCCTCGAACTCGCAGAGGGCAACGCATTACCACCTGAGCTCCCAGGTCCAAGAAATGGCTGGGAAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000508628.6
ENST00000559070.5
ENST00000582970.5
CDS TCA 72 bp TGGGAACTCTGGGACGCTCCCAGAAGCAGAGCCAAGTaGGTGAGTAGCCGGATAAGGAGGAAGACCACTGGG +
Preference number: 6 (lower is better)
Translates to: WELWDAPRSRAK*VSSRIRRKTTG
Trigger: CCCAGTGGTCTTCCTCCTTATCCGGCTACTCACTCACTTGGCTCTGCTTCTGGGAGCGTCCCAGAGTTCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411702.7
ENST00000508628.6
ENST00000558116.5
ENST00000582970.5
CDS TCA 72 bp CTTTGGGCGCCTGGATCACATAGATGCCTCTTTGGTTaGTGGCCGTGGCCAGGGTCAGGGATGAGCGTTCCA +
Preference number: 6 (lower is better)
Translates to: LWAPGSHRCLFG*WPWPGSGMSVP
Trigger: TGGAACGCTCATCCCTGACCCTGGCCACGGCCATCAACCAAAGAGGCATCTATGTGATCCAGGCGCCCAAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000508628.6
ENST00000571908.1
ENST00000582970.5
CDS TCA 72 bp GGATGTCTGAGGAGCAGATGCCCTTGGCGCTCTCTATaGGCTCTGTCTCGTTGGGGCTGCCACGTGACACAA +
Preference number: 6 (lower is better)
Translates to: GCLRSRCPWRSL*ALSRWGCHVTQ
Trigger: TTGTGTCACGTGGCAGCCCCAACGAGACAGAGCTCATAGAGAGCGCCAAGGGCATCTGCTCCTCAGACATCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS TCA 72 bp CGTACTTCTGGCCGCCGAGGTGGACGTAGTACTGGTTaGGTGCGTCGTAGAGGCTCTCGTAGAGGTTCTGCA +
Preference number: 6 (lower is better)
Translates to: RTSGRRGGRSTG*VRRRGSRRGSA
Trigger: TGCAGAACCTCTACGAGAGCCTCTACGACGCACTCAACCAGTACTACGTCCACCTCGGCGGCCAGAAGTACG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS GCA 72 bp CTGAGGAATCCGGAGAGAACTAGATTTCAGCGCCATTaGCCTTGGCGAGGGAGGAGGGTGCCCACTTCCCAA +
Preference number: 6 (lower is better)
Translates to: LRNPERTRFQRH*PWRGRRVPTSQ
Trigger: TTGGGAAGTGGGCACCCTCCTCCCTCGCCAAGGGCAATGGCGCTGAAATCTAGTTCTCTCCGGATTCCTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319921.4
CDS GCA 72 bp CACCCAAACCCTGAGGCAGACCACACAGATGTGGAGTaGTGCGGGAACTGTCCACCTGCTTCCAGGATTCTG +
Preference number: 6 (lower is better)
Translates to: HPNPEADHTDVE*CGNCPPASRIL
Trigger: CAGAATCCTGGAAGCAGGTGGACAGTTCCCGCAGCACTCCACATCTGTGTGGTCTGCCTCAGGGTTTGGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411702.7
CDS GCA 72 bp GCGATCCACGTCCTGAACAGCATATTCCCAGCAGAGTaGAGGTCGATGAAGGCCTGGCTGAGCCTCTGCACA +
Preference number: 6 (lower is better)
Translates to: AIHVLNSIFPAE*RSMKAWLSLCT
Trigger: TGTGCAGAGGCTCAGCCAGGCCTTCATCGACCTGCACTCTGCTGGGAATATGCTGTTCAGGACGTGGATCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000508628.6
ENST00000571908.1
ENST00000582970.5
CDS GCA 72 bp CGTGCACAGATTGTGGAAAAGCTCCTCCGCTTGGCGTaGCACCTCGTAGCTCAGCTGATCTGCGAACAGCAG +
Preference number: 6 (lower is better)
Translates to: RAQIVEKLLRLA*HLVAQLICEQQ
Trigger: CTGCTGTTCGCAGATCAGCTGAGCTACGAGGTGGCACGCCAAGCGGAGGAGCTTTTCCACAATCTGTGCACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS GCA 72 bp CTTCTGGCCGCCGAGGTGGACGTAGTACTGGTTGAGTaGGTCGTAGAGGCTCTCGTAGAGGTTCTGCAGGTT +
Preference number: 6 (lower is better)
Translates to: LLAAEVDVVLVE*VVEALVEVLQV
Trigger: AACCTGCAGAACCTCTACGAGAGCCTCTACGACGCACTCAACCAGTACTACGTCCACCTCGGCGGCCAGAAG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS GCA 72 bp AAGTCTCCGGGCGCGAACAGCTGGCTGATGGTGACATaGTGCAGCCTGGTCACATCAGAAACCATGAGGGTG +
Preference number: 6 (lower is better)
Translates to: KSPGANSWLMVT*CSLVTSETMRV
Trigger: CACCCTCATGGTTTCTGATGTGACCAGGCTGCAGCATGTCACCATCAGCCAGCTGTTCGCGCCCGGAGACTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS GCA 72 bp GGGTCTTGCTGGCTGTCTCCTTGCATTCACAGAGAGTaGGCATCACGGCCTCAAAAGGCCCGTGCGTCTTCA +
Preference number: 6 (lower is better)
Translates to: GSCWLSPCIHRE*ASRPQKARASS
Trigger: TGAAGACGCACGGGCCTTTTGAGGCCGTGATGCGCACTCTCTGTGAATGCAAGGAGACAGCCAGCAAGACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000508628.6
ENST00000558116.5
ENST00000582970.5
CDS GCA 72 bp CAAAGGCCAGGTAATCCCTTGTCTAGTAAGAAGACGTaGTCGGTCACCAGCCCCTGTAACTCGGGGACGCGG +
Preference number: 6 (lower is better)
Translates to: QRPGNPLSSKKT*SVTSPCNSGTR
Trigger: CCGCGTCCCCGAGTTACAGGGGCTGGTGACCGAGCACGTCTTCTTACTAGACAAGGGATTACCTGGCCTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559603.1
CDS CCA 72 bp CTGCAGAACTTGGGGGTTTCCTCCTTGGAGACATGCTaGCACGAAGGACACTCCATGGGTCCTGCTGGGACT +
Preference number: 6 (lower is better)
Translates to: LQNLGVSSLETC*HEGHSMGPAGT
Trigger: AGTCCCAGCAGGACCCATGGAGTGTCCTTCGTGCCAGCATGTCTCCAAGGAGGAAACCCCCAAGTTCTGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000319921.4
ENST00000508628.6
ENST00000582970.5
CDS CCA 72 bp AGCAACGACTCCTTCCAGCCATGCTCCGCGGGGAATTaGATTTCCACCAGCCGCCTCCAGACCTCAATTTCC +
Preference number: 6 (lower is better)
Translates to: SNDSFQPCSAGN*ISTSRLQTSIS
Trigger: GGAAATTGAGGTCTGGAGGCGGCTGGTGGAAATCCAATTCCCCGCGGAGCATGGCTGGAAGGAGTCGTTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319921.4
ENST00000508628.6
ENST00000559070.5
ENST00000582970.5
CDS CCA 72 bp GTGAATGGAGGGAACAGAGCAGCTCCTTCCAGCCTCTaGGCAAGCAGAGTGCTTCCTTTTTCCAGCCCCAGG +
Preference number: 6 (lower is better)
Translates to: VNGGNRAAPSSL*ASRVLPFSSPR
Trigger: CCTGGGGCTGGAAAAAGGAAGCACTCTGCTTGCCCAGAGGCTGGAAGGAGCTGCTCTGTTCCCTCCATTCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000411702.7
ENST00000558116.5
CDS CCA 72 bp TCGACATTGAAGGGCACCCTCTGGAGCAGCAGGCCCTaGTACAGGTCCCTGGTCATGACGTCTCTCTTGATG +
Preference number: 6 (lower is better)
Translates to: STLKGTLWSSRP*YRSLVMTSLLM
Trigger: CATCAAGAGAGACGTCATGACCAGGGACCTGTACCAGGGCCTGCTGCTCCAGAGGGTGCCCTTCAATGTCGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS CCA 72 bp TTGGCAAAGGACGCAAAGTACCCTTGGACTCGGTCCTaGACGAGGATGTCTGAGGAGCAGATGCCCTTGGCG +
Preference number: 6 (lower is better)
Translates to: LAKDAKYPWTRS*TRMSEEQMPLA
Trigger: CGCCAAGGGCATCTGCTCCTCAGACATCCTCGTCCAGGACCGAGTCCAAGGGTACTTTGCGTCCTTTGCCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS CCA 72 bp CTTCTGCAGACGCCACCGGTAGAATGCAGGTGGTTTTaGACCCTGAGGCACAAACCACGTGGACCCCAAGTC +
Preference number: 6 (lower is better)
Translates to: LLQTPPVECRWF*TLRHKPRGPQV
Trigger: GACTTGGGGTCCACGTGGTTTGTGCCTCAGGGTCCAAAACCACCTGCATTCTACCGGTGGCGTCTGCAGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559864.1
CDS CCA 72 bp ACACAACCCAGAGTCAGTGTCACTGAACCTGGAGGCTaGGGCGGGGTCAATGCAGAGCAAAGAGGACCTCAC +
Preference number: 6 (lower is better)
Translates to: TQPRVSVTEPGG*GGVNAEQRGPH
Trigger: GTGAGGTCCTCTTTGCTCTGCATTGACCCCGCCCCAGCCTCCAGGTTCAGTGACACTGACTCTGGGTTGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573548.1
CDS CAA 72 bp CAGCAACGACTCCTTCCAGCCATGCTCCGCGGGGAATaGGATTTCCACCAGCCGCCTCCAGACCTCAATTTC +
Preference number: 6 (lower is better)
Translates to: QQRLLPAMLRGE*DFHQPPPDLNF
Trigger: GAAATTGAGGTCTGGAGGCGGCTGGTGGAAATCCAATTCCCCGCGGAGCATGGCTGGAAGGAGTCGTTGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319921.4
ENST00000508628.6
ENST00000559070.5
ENST00000582970.5
CDS CAA 72 bp GCGGCCTCAAGCGGGGCTGCATCCTGCTTCCTTCTCTaGCTGGGTATGGCATTAGCAGCTTCCCATTCATCG +
Preference number: 6 (lower is better)
Translates to: AASSGAASCFLL*LGMALAASHSS
Trigger: CGATGAATGGGAAGCTGCTAATGCCATACCCAGCAAGAGAAGGAAGCAGGATGCAGCCCCGCTTGAGGCCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508628.6
CDS CAA 72 bp CTGCTGCGTGCACAGATTGTGGAAAAGCTCCTCCGCTaGGCGTGCCACCTCGTAGCTCAGCTGATCTGCGAA +
Preference number: 6 (lower is better)
Translates to: LLRAQIVEKLLR*ACHLVAQLICE
Trigger: TTCGCAGATCAGCTGAGCTACGAGGTGGCACGCCAAGCGGAGGAGCTTTTCCACAATCTGTGCACGCAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS CAA 90 bp TCAGCTCCTGCCCACACTCCATTTCACCCTCCGAGGCCGACGCCATaGTGGAGTTATTGTTCTCAGAATCTGCTATGGGGGCTGCAGGAG +
Preference number: 6 (lower is better)
Translates to: SAPAHTPFHPPRPTP*WSYCSQNLLWGLQE
Trigger: CTCCTGCAGCCCCCATAGCAGATTCTGAGAACAATAACTCCACAATGGCGTCGGCCTCGGAGGGTGAAATGGAGTGTGGGCAGGAGCTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000319921.4
ENST00000508628.6
ENST00000582970.5
CDS CAA 90 bp TCCACCTTCTTTAAGCTCCGTCACCAGGTCCAAGCCAAAGTCCATTaGGAGGGACACACCCTGCTTGGGGGAGCAGTAGGCCATGGCGAT +
Preference number: 6 (lower is better)
Translates to: STFFKLRHQVQAKVH*EGHTLLGGAVGHGD
Trigger: ATCGCCATGGCCTACTGCTCCCCCAAGCAGGGTGTGTCCCTCCAAATGGACTTTGGCTTGGACCTGGTGACGGAGCTTAAAGAAGGTGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000508628.6
ENST00000571908.1
ENST00000582970.5
CDS CAA 90 bp GACTGGGCTTCAGGGTGTTTCTTGTCAGCATCTCCGTGCAGGCCATaGCGGCAAATGCGTCCAGGGTCATCTCACATCCAGCCAGCTCAT +
Preference number: 6 (lower is better)
Translates to: DWASGCFLSASPCRP*RQMRPGSSHIQPAH
Trigger: ATGAGCTGGCTGGATGTGAGATGACCCTGGACGCATTTGCCGCAATGGCCTGCACGGAGATGCTGACAAGAAACACCCTGAAGCCCAGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000508628.6
ENST00000558116.5
ENST00000582970.5
CDS CAA 90 bp AGCCATTCGTCTTCTGCAGACGCCACCGGTAGAATGCAGGTGGTTTaGGACCCTGAGGCACAAACCACGTGGACCCCAAGTCGAACCCAA +
Preference number: 6 (lower is better)
Translates to: SHSSSADATGRMQVV*DPEAQTTWTPSRTQ
Trigger: TTGGGTTCGACTTGGGGTCCACGTGGTTTGTGCCTCAGGGTCCAAAACCACCTGCATTCTACCGGTGGCGTCTGCAGAAGACGAATGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559864.1
CDS TCA 72 bp GGTGCCAGTCGTTCTCCACCCGGATACAGAACTGCTTaGCTTGCTGCAGGTAGCACTGCTTCTCCTTGGCCA +
Preference number: 6 (lower is better)
Translates to: GASRSPPGYRTA*LAAGSTASPWP
Trigger: TGGCCAAGGAGAAGCAGTGCTACCTGCAGCAAGTCAAGCAGTTCTGTATCCGGGTGGAGAACGACTGGCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411702.7
ENST00000508628.6
ENST00000558116.5
ENST00000582970.5
CDS TCA 72 bp AAAGTACCCTTGGACTCGGTCCTGGACGAGGATGTCTaGGGAGCAGATGCCCTTGGCGCTCTCTATGAGCTC +
Preference number: 6 (lower is better)
Translates to: KVPLDSVLDEDV*GADALGALYEL
Trigger: GAGCTCATAGAGAGCGCCAAGGGCATCTGCTCCTCAGACATCCTCGTCCAGGACCGAGTCCAAGGGTACTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS TCA 72 bp GGCTCCCGCTGCCTTGCATGTGCTCATCGGAGCAGATaGGCTCCAGCGGCATGGAAAGATTCTTCACCAACT +
Preference number: 6 (lower is better)
Translates to: GSRCLACAHRSR*APAAWKDSSPT
Trigger: AGTTGGTGAAGAATCTTTCCATGCCGCTGGAGCTCATCTGCTCCGATGAGCACATGCAAGGCAGCGGGAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000508628.6
ENST00000558116.5
ENST00000558488.1
ENST00000559603.1
ENST00000582970.5
CDS GCA 72 bp ATCTCTGAGTTAGCGGAGGAGCTGAGACCCAGCGGGTaGTTCATAGCCCTTAGCTGGGTCATGGCAGAACAC +
Preference number: 6 (lower is better)
Translates to: ISELAEELRPSG*FIALSWVMAEH
Trigger: GTGTTCTGCCATGACCCAGCTAAGGGCTATGAAGCACCCGCTGGGTCTCAGCTCCTCCGCTAACTCAGAGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319921.4
CDS GCA 72 bp TGTGGTCAATGCCTCCAATCGGCGCATGGCAGTCAATaGAGATGCTCTGTTCCATCGGCCTGCCACACTCTC +
Preference number: 6 (lower is better)
Translates to: CGQCLQSAHGSQ*RCSVPSACHTL
Trigger: GAGAGTGTGGCAGGCCGATGGAACAGAGCATCTGCATTGACTGCCATGCGCCGATTGGAGGCATTGACCACA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000411702.7
ENST00000508628.6
ENST00000558116.5
ENST00000574909.1
ENST00000582970.5
CDS GCA 72 bp CCAAACCCTGAGGCAGACCACACAGATGTGGAGTGCTaGGGGAACTGTCCACCTGCTTCCAGGATTCTGTCA +
Preference number: 6 (lower is better)
Translates to: PNPEADHTDVEC*GNCPPASRILS
Trigger: TGACAGAATCCTGGAAGCAGGTGGACAGTTCCCGCAGCACTCCACATCTGTGTGGTCTGCCTCAGGGTTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411702.7
CDS GCA 72 bp TCCTCGTGGCTGCCAGGGCTCTCAGGAAGGATCAAGTaGAGAACCGTGTCTGGGGAAATCTTTTGGCCACCT +
Preference number: 6 (lower is better)
Translates to: SSWLPGLSGRIK*RTVSGEIFWPP
Trigger: AGGTGGCCAAAAGATTTCCCCAGACACGGTTCTGCACTTGATCCTTCCTGAGAGCCCTGGCAGCCACGAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000508628.6
ENST00000571908.1
ENST00000582970.5
CDS GCA 72 bp TTGCTGACGCTGGACTTGGAGAGAAAGGCATTCAGCTaGGCTAAGAGCATCGCGCTGTGCTCGTGGAACCAC +
Preference number: 6 (lower is better)
Translates to: LLTLDLERKAFS*AKSIALCSWNH
Trigger: GTGGTTCCACGAGCACAGCGCGATGCTCTTAGCGCAGCTGAATGCCTTTCTCTCCAAGTCCAGCGTCAGCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS GCA 72 bp CAGGGTGTTTCTTGTCAGCATCTCCGTGCAGGCCATTaGGGCAAATGCGTCCAGGGTCATCTCACATCCAGC +
Preference number: 6 (lower is better)
Translates to: QGVSCQHLRAGH*GKCVQGHLTSS
Trigger: GCTGGATGTGAGATGACCCTGGACGCATTTGCCGCAATGGCCTGCACGGAGATGCTGACAAGAAACACCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000508628.6
ENST00000558116.5
ENST00000582970.5
CDS GCA 72 bp GACTGGGCTTCAGGGTGTTTCTTGTCAGCATCTCCGTaGAGGCCATTGCGGCAAATGCGTCCAGGGTCATCT +
Preference number: 6 (lower is better)
Translates to: DWASGCFLSASP*RPLRQMRPGSS
Trigger: AGATGACCCTGGACGCATTTGCCGCAATGGCCTGCACGGAGATGCTGACAAGAAACACCCTGAAGCCCAGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000508628.6
ENST00000558116.5
ENST00000582970.5
CDS GCA 72 bp GAGTTCTCTCGAAGACACTTGTCTAGTAAGAAGACGTaGTCGGTCACCAGCCCCTGTAACTCGGGGACGCGG +
Preference number: 6 (lower is better)
Translates to: EFSRRHLSSKKT*SVTSPCNSGTR
Trigger: CCGCGTCCCCGAGTTACAGGGGCTGGTGACCGAGCACGTCTTCTTACTAGACAAGTGTCTTCGAGAGAACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000508628.6
ENST00000558116.5
ENST00000582970.5
CDS GCA 72 bp CAATGCCTCCAATCGGCGCATGGCAGTCAATGCAGATaGTCTGTTCCATCGGCCTGCCACACTAGGGTGAAG +
Preference number: 6 (lower is better)
Translates to: QCLQSAHGSQCR*SVPSACHTRVK
Trigger: CTTCACCCTAGTGTGGCAGGCCGATGGAACAGAGCATCTGCATTGACTGCCATGCGCCGATTGGAGGCATTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572622.1
CDS GCA 72 bp TGTGGTCAATGCCTCCAATCGGCGCATGGCAGTCAATaGAGATGCTCTGTTCCATCGGCCTGCCACACTAGG +
Preference number: 6 (lower is better)
Translates to: CGQCLQSAHGSQ*RCSVPSACHTR
Trigger: CCTAGTGTGGCAGGCCGATGGAACAGAGCATCTGCATTGACTGCCATGCGCCGATTGGAGGCATTGACCACA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572622.1
CDS CCA 72 bp AATCCGGAGAGAACTAGATTTCAGCGCCATTGCCCTTaGCGAGGGAGGAGGGTGCCCACTTCCCAATCTCTG +
Preference number: 6 (lower is better)
Translates to: NPERTRFQRHCP*RGRRVPTSQSL
Trigger: CAGAGATTGGGAAGTGGGCACCCTCCTCCCTCGCCAAGGGCAATGGCGCTGAAATCTAGTTCTCTCCGGATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319921.4
CDS CCA 72 bp TCCCGAGGTTTGTGGTCAATGCCTCCAATCGGCGCATaGCAGTCAATGCAGATGCTCTGTTCCATCGGCCTG +
Preference number: 6 (lower is better)
Translates to: SRGLWSMPPIGA*QSMQMLCSIGL
Trigger: CAGGCCGATGGAACAGAGCATCTGCATTGACTGCCATGCGCCGATTGGAGGCATTGACCACAAACCTCGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000411702.7
ENST00000508628.6
ENST00000558116.5
ENST00000572622.1
ENST00000574909.1
ENST00000582970.5
CDS CCA 72 bp TCACTCAGCGGCTCTGCGGCTTCCCGCCAGAAGAGCTaGAAGATGTGGCTGTCTCTGAGCAAGTCTATCTTC +
Preference number: 6 (lower is better)
Translates to: SLSGSAASRQKS*KMWLSLSKSIF
Trigger: GAAGATAGACTTGCTCAGAGACAGCCACATCTTCCAGCTCTTCTGGCGGGAAGCCGCAGAGCCGCTGAGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000508628.6
ENST00000559070.5
ENST00000582970.5
CDS CCA 72 bp CGGGCCTCGCTGATGTCCTGGAGCAGCTTTTTGGCCTaGATGAGCTCCTGGTTGATCTGGTCCAGTGTTTCA +
Preference number: 6 (lower is better)
Translates to: RASLMSWSSFLA*MSSWLIWSSVS
Trigger: TGAAACACTGGACCAGATCAACCAGGAGCTCATCCAGGCCAAAAAGCTGCTCCAGGACATCAGCGAGGCCCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000508628.6
ENST00000559070.5
ENST00000582970.5
CDS CCA 72 bp GCATTCAGCTGCGCTAAGAGCATCGCGCTGTGCTCGTaGAACCACCTGAAAACTTTCACACAGCGCTCCACG +
Preference number: 6 (lower is better)
Translates to: AFSCAKSIALCS*NHLKTFTQRST
Trigger: CGTGGAGCGCTGTGTGAAAGTTTTCAGGTGGTTCCACGAGCACAGCGCGATGCTCTTAGCGCAGCTGAATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS CCA 72 bp AATGCGTCCAGGGTCATCTCACATCCAGCCAGCTCATaGTTCCAACGGGCTTCCATCAGGCTGTGGAGAACC +
Preference number: 6 (lower is better)
Translates to: NASRVISHPASS*FQRASIRLWRT
Trigger: GGTTCTCCACAGCCTGATGGAAGCCCGTTGGAACCATGAGCTGGCTGGATGTGAGATGACCCTGGACGCATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000508628.6
ENST00000558116.5
ENST00000582970.5
CDS CCA 72 bp AAACTGTGGGCTCACAGCAAACACCCGGGGCAAGGCTaGAGTAGGCCTAACACGGAGGGAAACACACTGAGA +
Preference number: 6 (lower is better)
Translates to: KLWAHSKHPGQG*SRPNTEGNTLR
Trigger: TCTCAGTGTGTTTCCCTCCGTGTTAGGCCTACTCCAGCCTTGCCCCGGGTGTTTGCTGTGAGCCCACAGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560083.1
ENST00000573919.1
CDS CCA 72 bp TACCCGCATGCGGAGAGCAGGAACAAATCGGTTCCATaGACTTCCCGCTTCAGCAGGCATGGCCATGCATCA +
Preference number: 6 (lower is better)
Translates to: YPHAESRNKSVP*TSRFSRHGHAS
Trigger: TGATGCATGGCCATGCCTGCTGAAGCGGGAAGTCCATGGAACCGATTTGTTCCTGCTCTCCGCATGCGGGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560083.1
ENST00000573919.1
CDS CCA 72 bp AAACCAGGGAACATGCAGGCTCCAAGGGATGCCACCTaGTATCAGAGAGAAGCCACGGGCCCATCCTACCTT +
Preference number: 6 (lower is better)
Translates to: KPGNMQAPRDAT*YQREATGPSYL
Trigger: AAGGTAGGATGGGCCCGTGGCTTCTCTCTGATACCAGGTGGCATCCCTTGGAGCCTGCATGTTCCCTGGTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573038.1
CDS CAA 72 bp AGCTGTGAGCCCGAATCCGTTTCCCAGGAGGAGAGATaGTTCACCTGGCAGGCTGAGCTCACGGCTTCAATG +
Preference number: 6 (lower is better)
Translates to: SCEPESVSQEER*FTWQAELTASM
Trigger: CATTGAAGCCGTGAGCTCAGCCTGCCAGGTGAACAATCTCTCCTCCTGGGAAACGGATTCGGGCTCACAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319921.4
CDS CAA 72 bp TTGCAGGCCTTCAGAGCAGTCTTAATGCCCAGTGGCTaGCACTCGAGGACAGCTTTGGCCACAGCATCACGG +
Preference number: 6 (lower is better)
Translates to: LQAFRAVLMPSG*HSRTALATASR
Trigger: CCGTGATGCTGTGGCCAAAGCTGTCCTCGAGTGCAAGCCACTGGGCATTAAGACTGCTCTGAAGGCCTGCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411702.7
ENST00000508628.6
ENST00000558116.5
ENST00000582970.5
CDS CAA 72 bp ACCTCCTTATCACCGGCAGACGTGAGCACCCTCAGATaGTCCCAGTGTGTGCTTGTTTCGGGTGGGTGGAGA +
Preference number: 6 (lower is better)
Translates to: TSLSPADVSTLR*SQCVLVSGGWR
Trigger: TCTCCACCCACCCGAAACAAGCACACACTGGGACAATCTGAGGGTGCTCACGTCTGCCGGTGATAAGGAGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572622.1
CDS CAA 90 bp TCTCTTGCCCAGGGCGGAGTATCTGGCCTGGTCAGTAACTCTAGGTaGCCGTCTCTGTCGATGAATGATATCATGCTCGCCAGCAGAGGG +
Preference number: 6 (lower is better)
Translates to: SLAQGGVSGLVSNSR*PSLSMNDIMLASRG
Trigger: CCCTCTGCTGGCGAGCATGATATCATTCATCGACAGAGACGGCAACCTAGAGTTACTGACCAGGCCAGATACTCCGCCCTGGGCAAGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000508628.6
ENST00000558116.5
ENST00000560694.1
ENST00000582970.5
CDS CAA 90 bp CAAATGAACACCTCCTTATCACCGGCAGACGTGAGCACCCTCAGATaGTCCCAGTGTGTGCTTGTTTCGGGTGGGTGGAGAACCCATGGG +
Preference number: 6 (lower is better)
Translates to: QMNTSLSPADVSTLR*SQCVLVSGGWRTHG
Trigger: CCCATGGGTTCTCCACCCACCCGAAACAAGCACACACTGGGACAATCTGAGGGTGCTCACGTCTGCCGGTGATAAGGAGGTGTTCATTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572622.1
CDS CAA 90 bp TGTTCCATCGGCCTGCCACACTCTCCCACGGAGCAAGGATGGCCGTaGGGACAAGCTGTGAAGAGAACAGGACACACATTGGCTAATGAG +
Preference number: 6 (lower is better)
Translates to: CSIGLPHSPTEQGWP*GQAVKRTGHTLANE
Trigger: CTCATTAGCCAATGTGTGTCCTGTTCTCTTCACAGCTTGTCCCAACGGCCATCCTTGCTCCGTGGGAGAGTGTGGCAGGCCGATGGAACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574909.1
CDS TCA 72 bp GCTGGCAGCCTGCTATATACTACATGTCCTGTCACGTaGCCACGGCTTCAGTTTCATTTTCTGCGGCCCCCG +
Preference number: 6 (lower is better)
Translates to: AGSLLYTTCPVT*PRLQFHFLRPP
Trigger: CGGGGGCCGCAGAAAATGAAACTGAAGCCGTGGTCACGTGACAGGACATGTAGTATATAGCAGGCTGCCAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000319921.4
ENST00000508628.6
ENST00000582970.5
CDS TCA 72 bp CAGGATGGTGCGAGCAGCAGGGACTGTGCAGCACACTaGGGAATCCGGAGAGAACTAGATTTCAGCGCCATT +
Preference number: 6 (lower is better)
Translates to: QDGASSRDCAAH*GIRRELDFSAI
Trigger: AATGGCGCTGAAATCTAGTTCTCTCCGGATTCCTCAGTGTGCTGCACAGTCCCTGCTGCTCGCACCATCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319921.4
CDS TCA 72 bp TCTTTCTCTTCAATGACAATCAGGCGGAAGTTGGGGTaGACCCGACATTTGACGCGGTGGGTCCCCAGACCG +
Preference number: 6 (lower is better)
Translates to: SFSSMTIRRKLG*TRHLTRWVPRP
Trigger: CGGTCTGGGGACCCACCGCGTCAAATGTCGGGTTCACCCCAACTTCCGCCTGATTGTCATTGAAGAGAAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS TCA 72 bp GCAGATGCTCTGTTCCATCGGCCTGCCACACTAGGGTaGAGACAGGGCACTAGAACCACTTCTGGAGCAGTA +
Preference number: 6 (lower is better)
Translates to: ADALFHRPATLG*RQGTRTTSGAV
Trigger: TACTGCTCCAGAAGTGGTTCTAGTGCCCTGTCTTCACCCTAGTGTGGCAGGCCGATGGAACAGAGCATCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572622.1
CDS GCA 72 bp CAGATCCAGAAGCAAGAGCAGGAGTCGCTGGCAGCCTaGTATATACTACATGTCCTGTCACGTGACCACGGC +
Preference number: 6 (lower is better)
Translates to: QIQKQEQESLAA*YILHVLSRDHG
Trigger: GCCGTGGTCACGTGACAGGACATGTAGTATATAGCAGGCTGCCAGCGACTCCTGCTCTTGCTTCTGGATCTG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319921.4
ENST00000508628.6
ENST00000582970.5
CDS GCA 72 bp GTGAAGAAGCTGTTCAGGTTGATGGTGTCCCAGGTCTaGAGGATGCTGAAGGTGCTGTCCAGCATGAGCGCA +
Preference number: 6 (lower is better)
Translates to: VKKLFRLMVSQV*RMLKVLSSMSA
Trigger: TGCGCTCATGCTGGACAGCACCTTCAGCATCCTGCAGACCTGGGACACCATCAACCTGAACAGCTTCTTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319921.4
ENST00000508628.6
ENST00000559070.5
ENST00000582970.5
CDS GCA 72 bp ATCTTGGCCAACTGCTCCAGGTCCTTCAGGATGTGCTaGTGCAGAAAGCCTTTTGGATCCCTCACTGGAGGC +
Preference number: 6 (lower is better)
Translates to: ILANCSRSFRMC*CRKPFGSLTGG
Trigger: GCCTCCAGTGAGGGATCCAAAAGGCTTTCTGCAGCAGCACATCCTGAAGGACCTGGAGCAGTTGGCCAAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411702.7
ENST00000508628.6
ENST00000558116.5
ENST00000582970.5
CDS GCA 72 bp TCCCAGGCTCTCTTTGACCTGCAAGATGACCTTGGCTaGGTGGACAGCCTGGTGCAGGTGATGGTATTCCTT +
Preference number: 6 (lower is better)
Translates to: SQALFDLQDDLG*VDSLVQVMVFL
Trigger: AAGGAATACCATCACCTGCACCAGGCTGTCCACGCAGCCAAGGTCATCTTGCAGGTCAAAGAGAGCCTGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000508628.6
ENST00000559070.5
ENST00000582970.5
CDS GCA 72 bp CAAGCCATTCGTCTTCTGCAGACGCCACCGGTAGAATaGAGGTGGTTTTGGACCCTGAGGCACAAACCACGT +
Preference number: 6 (lower is better)
Translates to: QAIRLLQTPPVE*RWFWTLRHKPR
Trigger: ACGTGGTTTGTGCCTCAGGGTCCAAAACCACCTGCATTCTACCGGTGGCGTCTGCAGAAGACGAATGGCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559864.1
CDS GCA 72 bp ACGGAGGGAAACACACTGAGAAGGCAGAAAGCCCCGTaGACAGGATCAGGTTTATCGGGATCACCTGTGCCA +
Preference number: 6 (lower is better)
Translates to: TEGNTLRRQKAP*TGSGLSGSPVP
Trigger: TGGCACAGGTGATCCCGATAAACCTGATCCTGTGCACGGGGCTTTCTGCCTTCTCAGTGTGTTTCCCTCCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560083.1
ENST00000573919.1
CDS CCA 72 bp AGCATATTCCCAGCAGAGTGCAGGTCGATGAAGGCCTaGCTGAGCCTCTGCACACTGCAGAAGACCTCTGAA +
Preference number: 6 (lower is better)
Translates to: SIFPAECRSMKA*LSLCTLQKTSE
Trigger: TTCAGAGGTCTTCTGCAGTGTGCAGAGGCTCAGCCAGGCCTTCATCGACCTGCACTCTGCTGGGAATATGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000508628.6
ENST00000571908.1
ENST00000582970.5
CDS CCA 72 bp CCTTGTCCTGGCGCTTACACACCGTTTCGTAGGCTTTaGCAAAGGACGCAAAGTACCCTTGGACTCGGTCCT +
Preference number: 6 (lower is better)
Translates to: PCPGAYTPFRRL*QRTQSTLGLGP
Trigger: AGGACCGAGTCCAAGGGTACTTTGCGTCCTTTGCCAAAGCCTACGAAACGGTGTGTAAGCGCCAGGACAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS CCA 72 bp CTTCAGCCATTCCAAGTTCCTGGCGGAGTCACACTATaGGGACAAAAGGAGAGAACACGGGCCACGGTTGGA +
Preference number: 6 (lower is better)
Translates to: LQPFQVPGGVTL*GQKERTRATVG
Trigger: TCCAACCGTGGCCCGTGTTCTCTCCTTTTGTCCCCATAGTGTGACTCCGCCAGGAACTTGGAATGGCTGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571908.1
CDS CAA 72 bp ATTTCACCCTCCGAGGCCGACGCCATTGTGGAGTTATaGTTCTCAGAATCTGCTATGGGGGCTGCAGGAGGC +
Preference number: 6 (lower is better)
Translates to: ISPSEADAIVEL*FSESAMGAAGG
Trigger: GCCTCCTGCAGCCCCCATAGCAGATTCTGAGAACAATAACTCCACAATGGCGTCGGCCTCGGAGGGTGAAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000319921.4
ENST00000508628.6
ENST00000582970.5
CDS CAA 72 bp GCCCACACTCCATTTCACCCTCCGAGGCCGACGCCATaGTGGAGTTATTGTTCTCAGAATCTGCTATGGGGG +
Preference number: 6 (lower is better)
Translates to: AHTPFHPPRPTP*WSYCSQNLLWG
Trigger: CCCCCATAGCAGATTCTGAGAACAATAACTCCACAATGGCGTCGGCCTCGGAGGGTGAAATGGAGTGTGGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319921.4
ENST00000508628.6
ENST00000582970.5
CDS CAA 72 bp CCAGTCGTTCTCCACCCGGATACAGAACTGCTTGACTaGCTGCAGGTAGCACTGCTTCTCCTTGGCCATCTC +
Preference number: 6 (lower is better)
Translates to: PVVLHPDTELLD*LQVALLLLGHL
Trigger: GAGATGGCCAAGGAGAAGCAGTGCTACCTGCAGCAAGTCAAGCAGTTCTGTATCCGGGTGGAGAACGACTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411702.7
ENST00000508628.6
ENST00000558116.5
ENST00000582970.5
CDS CAA 72 bp AGAACACTGAAGTCACCGTTCAGTCCCAGGCTCTCTTaGACCTGCAAGATGACCTTGGCTGCGTGGACAGCC +
Preference number: 6 (lower is better)
Translates to: RTLKSPFSPRLS*TCKMTLAAWTA
Trigger: GGCTGTCCACGCAGCCAAGGTCATCTTGCAGGTCAAAGAGAGCCTGGGACTGAACGGTGACTTCAGTGTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000508628.6
ENST00000559070.5
ENST00000582970.5
CDS CAA 72 bp TCCTGGAGCAGCTTTTTGGCCTGGATGAGCTCCTGGTaGATCTGGTCCAGTGTTTCACGGCGAAAGTCGTCG +
Preference number: 6 (lower is better)
Translates to: SWSSFLAWMSSW*IWSSVSRRKSS
Trigger: CGACGACTTTCGCCGTGAAACACTGGACCAGATCAACCAGGAGCTCATCCAGGCCAAAAAGCTGCTCCAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000508628.6
ENST00000559070.5
ENST00000582970.5
CDS CAA 72 bp TCAGGGTGTTTCTTGTCAGCATCTCCGTGCAGGCCATaGCGGCAAATGCGTCCAGGGTCATCTCACATCCAG +
Preference number: 6 (lower is better)
Translates to: SGCFLSASPCRP*RQMRPGSSHIQ
Trigger: CTGGATGTGAGATGACCCTGGACGCATTTGCCGCAATGGCCTGCACGGAGATGCTGACAAGAAACACCCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000508628.6
ENST00000558116.5
ENST00000582970.5
CDS CAA 72 bp CATCCTACCTTCAGAGCAGTCTTAATGCCCAGTGGCTaGCACTCGAGGACAGCTTTGGCCACAGCATCACGG +
Preference number: 6 (lower is better)
Translates to: HPTFRAVLMPSG*HSRTALATASR
Trigger: CCGTGATGCTGTGGCCAAAGCTGTCCTCGAGTGCAAGCCACTGGGCATTAAGACTGCTCTGAAGGTAGGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573038.1
CDS CAA 90 bp GCAGAACACAGCTGTGAGCCCGAATCCGTTTCCCAGGAGGAGAGATaGTTCACCTGGCAGGCTGAGCTCACGGCTTCAATGATGCATTTC +
Preference number: 6 (lower is better)
Translates to: AEHSCEPESVSQEER*FTWQAELTASMMHF
Trigger: GAAATGCATCATTGAAGCCGTGAGCTCAGCCTGCCAGGTGAACAATCTCTCCTCCTGGGAAACGGATTCGGGCTCACAGCTGTGTTCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319921.4
CDS CAA 90 bp TTCAGAGCAGTCTTAATGCCCAGTGGCTTGCACTCGAGGACAGCTTaGGCCACAGCATCACGGAGAGCCTTGTATTCATCGCCGTACACC +
Preference number: 6 (lower is better)
Translates to: FRAVLMPSGLHSRTA*ATASRRALYSSPYT
Trigger: GGTGTACGGCGATGAATACAAGGCTCTCCGTGATGCTGTGGCCAAAGCTGTCCTCGAGTGCAAGCCACTGGGCATTAAGACTGCTCTGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000411702.7
ENST00000508628.6
ENST00000558116.5
ENST00000573038.1
ENST00000582970.5
CDS CAA 90 bp AAAGTGTTGAGAACACTGAAGTCACCGTTCAGTCCCAGGCTCTCTTaGACCTGCAAGATGACCTTGGCTGCGTGGACAGCCTGGTGCAGG +
Preference number: 6 (lower is better)
Translates to: KVLRTLKSPFSPRLS*TCKMTLAAWTAWCR
Trigger: CCTGCACCAGGCTGTCCACGCAGCCAAGGTCATCTTGCAGGTCAAAGAGAGCCTGGGACTGAACGGTGACTTCAGTGTTCTCAACACTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000508628.6
ENST00000559070.5
ENST00000582970.5
CDS CAA 90 bp GACTCCAAACGGCAGATCATCTCCTCAGAGTGCTTCCGGTATGGATaGCAGGCAGCTATAATATGCAGGCCAGAGTCCTCAGCCAGAGGC +
Preference number: 6 (lower is better)
Translates to: DSKRQIISSECFRYG*QAAIICRPESSARG
Trigger: GCCTCTGGCTGAGGACTCTGGCCTGCATATTATAGCTGCCTGCAATCCATACCGGAAGCACTCTGAGGAGATGATCTGCCGTTTGGAGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS CAA 90 bp CTGGACAATCTGCTGGATGTAGAGCTTTTCAGCAACGTCACTCAGTaGTCCAAAGTCCCACACCAGAGGAATCAGGCTCGGGGGCAGAGC +
Preference number: 6 (lower is better)
Translates to: LDNLLDVELFSNVTQ*SKVPHQRNQARGQS
Trigger: GCTCTGCCCCCGAGCCTGATTCCTCTGGTGTGGGACTTTGGACAACTGAGTGACGTTGCTGAAAAGCTCTACATCCAGCAGATTGTCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS CAA 90 bp AGCTGCATGGGGCTGACTTCCTCTGAGCACTTGGCCTCGGGCAAATaGGCCAGAAAGATGTCCAAAGCTTGGATGTCATCCTTGCCACTG +
Preference number: 6 (lower is better)
Translates to: SCMGLTSSEHLASGK*ARKMSKAWMSSLPL
Trigger: CAGTGGCAAGGATGACATCCAAGCTTTGGACATCTTTCTGGCCAATTTGCCCGAGGCCAAGTGCTCAGAGGAAGTCAGCCCCATGCAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS TCA 72 bp TGGTCTGAGACTGGCAGGCTGAGCTCACGGCTTCAATaGTGCATTTCTCGAAGGTCTTGGCCACACTGTCCT +
Preference number: 6 (lower is better)
Translates to: WSETGRLSSRLQ*CISRRSWPHCP
Trigger: AGGACAGTGTGGCCAAGACCTTCGAGAAATGCATCATTGAAGCCGTGAGCTCAGCCTGCCAGTCTCAGACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000508628.6
ENST00000559070.5
ENST00000582970.5
CDS TCA 72 bp AAGATGACCTTGGCTGCGTGGACAGCCTGGTGCAGGTaGTGGTATTCCTTGATCTGTTCGACTCGGTCCTTG +
Preference number: 6 (lower is better)
Translates to: KMTLAAWTAWCR*WYSLICSTRSL
Trigger: CAAGGACCGAGTCGAACAGATCAAGGAATACCATCACCTGCACCAGGCTGTCCACGCAGCCAAGGTCATCTT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000508628.6
ENST00000559070.5
ENST00000582970.5
CDS TCA 72 bp GTGGCCAGGGTCAGGGATGAGCGTTCCACAGACCCATaGCTCTCATTCACAGTCTTCAGCCATTCCAAGTTC +
Preference number: 6 (lower is better)
Translates to: VARVRDERSTDP*LSFTVFSHSKF
Trigger: GAACTTGGAATGGCTGAAGACTGTGAATGAGAGTCATGGGTCTGTGGAACGCTCATCCCTGACCCTGGCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000508628.6
ENST00000571908.1
ENST00000582970.5
CDS TCA 72 bp GACTCAGCATCTTCCTGCTCTCCACCCGGCACCTTCTaGGAAGGCCCAAAGATGTTCTGTTTGATCAGCTGC +
Preference number: 6 (lower is better)
Translates to: DSASSCSPPGTF*EGPKMFCLISC
Trigger: GCAGCTGATCAAACAGAACATCTTTGGGCCTTCTCAGAAGGTGCCGGGTGGAGAGCAGGAAGATGCTGAGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS TCA 72 bp TGGAGCTGGGCAAGAAACCTGCCCAGAGGAGTCTGCTaGAAGATGTCCACGAACTTCTTGGGCAGTCCTTCT +
Preference number: 6 (lower is better)
Translates to: WSWARNLPRGVC*KMSTNFLGSPS
Trigger: AGAAGGACTGCCCAAGAAGTTCGTGGACATCTTTCAGCAGACTCCTCTGGGCAGGTTTCTTGCCCAGCTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000508628.6
ENST00000558116.5
ENST00000582970.5
CDS TCA 72 bp TGGTCAGGATTCTGGAAAAGTTCTGCAGACGGCTTCTaGAACGCTGGTAGGCAAGGTGCACCCACGGTAAGG +
Preference number: 6 (lower is better)
Translates to: WSGFWKSSADGF*NAGRQGAPTVR
Trigger: CCTTACCGTGGGTGCACCTTGCCTACCAGCGTTTCAGAAGCCGTCTGCAGAACTTTTCCAGAATCCTGACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000508628.6
ENST00000558116.5
ENST00000582970.5
CDS GCA 72 bp ACGGGGCTGACTTCGGAACTGAAGACTCCCCATATATaGACACTGAACACTTGCGTGCAGACGCTCCCGAAT +
Preference number: 6 (lower is better)
Translates to: TGLTSELKTPHI*TLNTCVQTLPN
Trigger: ATTCGGGAGCGTCTGCACGCAAGTGTTCAGTGTGCATATATGGGGAGTCTTCAGTTCCGAAGTCAGCCCCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000411702.7
ENST00000558116.5
CDS GCA 72 bp AGATCTTCTTCCCTAACCCCATCCATGGTGACCATGTaGTTCCCCGGGCTTTGGTCAGAGGTGTGGAGTGAT +
Preference number: 6 (lower is better)
Translates to: RSSSLTPSMVTM*FPGLWSEVWSD
Trigger: ATCACTCCACACCTCTGACCAAAGCCCGGGGAAGCACATGGTCACCATGGATGGGGTTAGGGAAGAAGATCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS GCA 72 bp AGAAAGGCATTCAGCTGCGCTAAGAGCATCGCGCTGTaGTCGTGGAACCACCTGAAAACTTTCACACAGCGC +
Preference number: 6 (lower is better)
Translates to: RKAFSCAKSIAL*SWNHLKTFTQR
Trigger: GCGCTGTGTGAAAGTTTTCAGGTGGTTCCACGAGCACAGCGCGATGCTCTTAGCGCAGCTGAATGCCTTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS GCA 72 bp ACTTCTTTGAGGAATGAGTACTCGGTGTCAAACTGCTaGAGCCACAGGAGTGTGGGTTTCGGAGCCCTGCCT +
Preference number: 6 (lower is better)
Translates to: TSLRNEYSVSNC*SHRSVGFGALP
Trigger: AGGCAGGGCTCCGAAACCCACACTCCTGTGGCTGCAGCAGTTTGACACCGAGTACTCATTCCTCAAAGAAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS GCA 72 bp GTGGACACCAGGTCTACGAAGAAACTGTTGCACATCTaGCGGAAGCGGGCATGCTTTTCAATGGCTTCCCTG +
Preference number: 6 (lower is better)
Translates to: VDTRSTKKLLHI*RKRACFSMASL
Trigger: CAGGGAAGCCATTGAAAAGCATGCCCGCTTCCGGCAGATGTGCAACAGTTTCTTCGTAGACCTGGTGTCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000508628.6
ENST00000558116.5
ENST00000582970.5
CDS CCA 72 bp CACACTCCATTTCACCCTCCGAGGCCGACGCCATTGTaGAGTTATTGTTCTCAGAATCTGCTATGGGGGCTG +
Preference number: 6 (lower is better)
Translates to: HTPFHPPRPTPL*SYCSQNLLWGL
Trigger: CAGCCCCCATAGCAGATTCTGAGAACAATAACTCCACAATGGCGTCGGCCTCGGAGGGTGAAATGGAGTGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000319921.4
ENST00000508628.6
ENST00000582970.5
CDS CCA 72 bp CCCGAATCCGTTTCCCAGGAGGAGAGATTGTTCACCTaGCAGGCTGAGCTCACGGCTTCAATGATGCATTTC +
Preference number: 6 (lower is better)
Translates to: PESVSQEERLFT*QAELTASMMHF
Trigger: GAAATGCATCATTGAAGCCGTGAGCTCAGCCTGCCAGGTGAACAATCTCTCCTCCTGGGAAACGGATTCGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319921.4
CDS CCA 72 bp CTCCTCCACCTGGTACTGGCAGTTGGAGAGAATCAGTaGAGTCAGGTCCCGCTCCACTTCATAACTGATGAC +
Preference number: 6 (lower is better)
Translates to: LLHLVLAVGENQ*SQVPLHFITDD
Trigger: GTCATCAGTTATGAAGTGGAGCGGGACCTGACTCCACTGATTCTCTCCAACTGCCAGTACCAGGTGGAGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000411702.7
ENST00000427003.7
ENST00000508628.6
ENST00000560083.1
ENST00000582970.5
CDS CCA 72 bp ATGTCCTGGAGCAGCTTTTTGGCCTGGATGAGCTCCTaGTTGATCTGGTCCAGTGTTTCACGGCGAAAGTCG +
Preference number: 6 (lower is better)
Translates to: MSWSSFLAWMSS*LIWSSVSRRKS
Trigger: CGACTTTCGCCGTGAAACACTGGACCAGATCAACCAGGAGCTCATCCAGGCCAAAAAGCTGCTCCAGGACAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000508628.6
ENST00000559070.5
ENST00000582970.5
CDS CCA 72 bp TTCACCTCCTCTAAAGAGTACTCTCGTGACTCCTCGTaGCTGCCAGGGCTCTCAGGAAGGATCAAGTGCAGA +
Preference number: 6 (lower is better)
Translates to: FTSSKEYSRDSS*LPGLSGRIKCR
Trigger: TCTGCACTTGATCCTTCCTGAGAGCCCTGGCAGCCACGAGGAGTCACGAGAGTACTCTTTAGAGGAGGTGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000508628.6
ENST00000571908.1
ENST00000582970.5
CDS CCA 72 bp AAAGATTCTTCACCAACTGTAGCCACGCCTGGGGACTaGGCTTCAGGGTGTTTCTTGTCAGCATCTCCGTGC +
Preference number: 6 (lower is better)
Translates to: KDSSPTVATPGD*ASGCFLSASPC
Trigger: GCACGGAGATGCTGACAAGAAACACCCTGAAGCCCAGTCCCCAGGCGTGGCTACAGTTGGTGAAGAATCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000508628.6
ENST00000558116.5
ENST00000558488.1
ENST00000582970.5
CDS CCA 72 bp CAGTGTCTCTGGGCAGCATCTCTTAAGCGCCCCTTTTaGACGAAGAGGAGAGAGAGCAGGCTCTCAATCACT +
Preference number: 6 (lower is better)
Translates to: QCLWAASLKRPF*TKRRESRLSIT
Trigger: AGTGATTGAGAGCCTGCTCTCTCTCCTCTTCGTCCAAAAGGGGCGCTTAAGAGATGCTGCCCAGAGACACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000508628.6
ENST00000558116.5
ENST00000582970.5
CDS CCA 72 bp TGGGAAATGAAAAGCAGGAGAGGGATGTCTGTGGGCTaGGTTTCTGGCATCTCACCACCTGGTAAGAGAGCC +
Preference number: 6 (lower is better)
Translates to: WEMKSRRGMSVG*VSGISPPGKRA
Trigger: GGCTCTCTTACCAGGTGGTGAGATGCCAGAAACCCAGCCCACAGACATCCCTCTCCTGCTTTTCATTTCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560083.1
ENST00000573919.1
CDS CAA 72 bp GTCTTAATGCCCAGTGGCTTGCACTCGAGGACAGCTTaGGCCACAGCATCACGGAGAGCCTTGTATTCATCG +
Preference number: 6 (lower is better)
Translates to: VLMPSGLHSRTA*ATASRRALYSS
Trigger: CGATGAATACAAGGCTCTCCGTGATGCTGTGGCCAAAGCTGTCCTCGAGTGCAAGCCACTGGGCATTAAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000411702.7
ENST00000508628.6
ENST00000558116.5
ENST00000573038.1
ENST00000582970.5
CDS CAA 72 bp CTCCTCAGGGCACTCAGCTCCATGTCTATCACCTCTTaGGGAGGCCTGCAGGTGACTTTTGGGAAGATGTCA +
Preference number: 6 (lower is better)
Translates to: LLRALSSMSITS*GGLQVTFGKMS
Trigger: TGACATCTTCCCAAAAGTCACCTGCAGGCCTCCCAAAGAGGTGATAGACATGGAGCTGAGTGCCCTGAGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS CAA 72 bp CCTCCGTGCACCTTGACCAGCTTTATGGTGTCAGCATaGGTACCACCACGCCGCAGGTCGCTAAGGAATTTA +
Preference number: 6 (lower is better)
Translates to: PPCTLTSFMVSA*VPPRRRSLRNL
Trigger: TAAATTCCTTAGCGACCTGCGGCGTGGTGGTACCAATGCTGACACCATAAAGCTGGTCAAGGTGCACGGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS CAA 72 bp GGGCTGACTTCCTCTGAGCACTTGGCCTCGGGCAAATaGGCCAGAAAGATGTCCAAAGCTTGGATGTCATCC +
Preference number: 6 (lower is better)
Translates to: GLTSSEHLASGK*ARKMSKAWMSS
Trigger: GGATGACATCCAAGCTTTGGACATCTTTCTGGCCAATTTGCCCGAGGCCAAGTGCTCAGAGGAAGTCAGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS CAA 72 bp CAGGGCGGAGTATCTGGCCTGGTCAGTAACTCTAGGTaGCCGTCTCTGTCGATGAATGATATCATGCTCGCC +
Preference number: 6 (lower is better)
Translates to: QGGVSGLVSNSR*PSLSMNDIMLA
Trigger: GGCGAGCATGATATCATTCATCGACAGAGACGGCAACCTAGAGTTACTGACCAGGCCAGATACTCCGCCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000508628.6
ENST00000558116.5
ENST00000560694.1
ENST00000582970.5
CDS CAA 72 bp ATCCCAAACCTGCTGAGGGTCTTGCTGGCTGTCTCCTaGCATTCACAGAGAGTGCGCATCACGGCCTCAAAA +
Preference number: 6 (lower is better)
Translates to: IPNLLRVLLAVS*HSQRVRITASK
Trigger: TTTTGAGGCCGTGATGCGCACTCTCTGTGAATGCAAGGAGACAGCCAGCAAGACCCTCAGCAGGTTTGGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000508628.6
ENST00000558116.5
ENST00000582970.5
CDS CAA 72 bp AGCAGGCTCTCAATCACTTCCTTCTCAGGCGGAGCGTaGTCCTTGAAGCAAATGGTGGACACCAGGTCTACG +
Preference number: 6 (lower is better)
Translates to: SRLSITSFSGGA*SLKQMVDTRST
Trigger: CGTAGACCTGGTGTCCACCATTTGCTTCAAGGACAACGCTCCGCCTGAGAAGGAAGTGATTGAGAGCCTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000508628.6
ENST00000558116.5
ENST00000582970.5
CDS TCA 72 bp GATTGTTCACCTGGCAGGCTGAGCTCACGGCTTCAATaGTGCATTTCTCGAAGGTCTTGGCCACACTGTCCT +
Preference number: 6 (lower is better)
Translates to: DCSPGRLSSRLQ*CISRRSWPHCP
Trigger: AGGACAGTGTGGCCAAGACCTTCGAGAAATGCATCATTGAAGCCGTGAGCTCAGCCTGCCAGGTGAACAATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319921.4
CDS TCA 72 bp GTCATGACGTCTCTCTTGATGACCTTCCCAGTCAAGTaGCTGATGGCATCGACACTGCCGTTGATGTTGGGC +
Preference number: 6 (lower is better)
Translates to: VMTSLLMTFPVK*LMASTLPLMLG
Trigger: GCCCAACATCAACGGCAGTGTCGATGCCATCAGTCACTTGACTGGGAAGGTCATCAAGAGAGACGTCATGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS TCA 72 bp CGTCTCCTCCATACTAACCCTGTAGCCCAAACCAGCTaGCTCCAAACGGCAGATCATCTCCTCAGAGTGCTT +
Preference number: 6 (lower is better)
Translates to: RLLHTNPVAQTS*LQTADHLLRVL
Trigger: AAGCACTCTGAGGAGATGATCTGCCGTTTGGAGTCAGCTGGTTTGGGCTACAGGGTTAGTATGGAGGAGACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS TCA 72 bp AGCATCAACGACCAGAGGACGGGATCTCTCTCGGTGTaGTTTTTGCTGACGCTGGACTTGGAGAGAAAGGCA +
Preference number: 6 (lower is better)
Translates to: SINDQRTGSLSV*FLLTLDLERKA
Trigger: TGCCTTTCTCTCCAAGTCCAGCGTCAGCAAAAATCACACCGAGAGAGATCCCGTCCTCTGGTCGTTGATGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS TCA 72 bp GTGCGTCGTAGAGGCTCTCGTAGAGGTTCTGCAGGTTaGGAAGCAACACCATCTTGCCTGTTTCCATGCAGA +
Preference number: 6 (lower is better)
Translates to: VRRRGSRRGSAG*EATPSCLFPCR
Trigger: TCTGCATGGAAACAGGCAAGATGGTGTTGCTTCTCAACCTGCAGAACCTCTACGAGAGCCTCTACGACGCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS TCA 72 bp CTCCCACGGAGCAAGGATGGCCGTTGGGACAAGCTGTaGAGAGAACAGGACACACATTGGCTAATGAGGTTT +
Preference number: 6 (lower is better)
Translates to: LPRSKDGRWDKL*REQDTHWLMRF
Trigger: AAACCTCATTAGCCAATGTGTGTCCTGTTCTCTTCACAGCTTGTCCCAACGGCCATCCTTGCTCCGTGGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574909.1
CDS GCA 72 bp CACAGCTTCACATTGCTCTGGCGTGGGGTGGAGGCTTaGATTGTGGGATCTGTACAAAATAGCCACCTCTCT +
Preference number: 6 (lower is better)
Translates to: HSFTLLWRGVEA*IVGSVQNSHLS
Trigger: AGAGAGGTGGCTATTTTGTACAGATCCCACAATGCAAGCCTCCACCCCACGCCAGAGCAATGTGAAGCTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411702.7
ENST00000508628.6
ENST00000558116.5
ENST00000582970.5
CDS GCA 72 bp GATCCTGTGCCCGTGTTATTTCATCCAGAAGCAGCCTaGTGTCGTCATACGGTTTCGGAAAGAACCTGGCGA +
Preference number: 6 (lower is better)
Translates to: DPVPVLFHPEAA*CRHTVSERTWR
Trigger: TCGCCAGGTTCTTTCCGAAACCGTATGACGACAGCAGGCTGCTTCTGGATGAAATAACACGGGCACAGGATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS GCA 72 bp TCAAAATTTAAAAGCCTTCTGCTAGAGAGCTGGTGCTaGTCTTGGAGAAGCCTGCGCAGGACGAGGTGGACC +
Preference number: 6 (lower is better)
Translates to: SKFKSLLLESWC*SWRSLRRTRWT
Trigger: GGTCCACCTCGTCCTGCGCAGGCTTCTCCAAGAGCAGCACCAGCTCTCTAGCAGAAGGCTTTTAAATTTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS GCA 72 bp GTGTCAAAATTTAAAAGCCTTCTGCTAGAGAGCTGGTaGTGCTCTTGGAGAAGCCTGCGCAGGACGAGGTGG +
Preference number: 6 (lower is better)
Translates to: VSKFKSLLLESW*CSWRSLRRTRW
Trigger: CCACCTCGTCCTGCGCAGGCTTCTCCAAGAGCAGCACCAGCTCTCTAGCAGAAGGCTTTTAAATTTTGACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS GCA 72 bp CATGGAGACACACAGGTCTACCTATCAGTACCCGCATaGGGAGAGCAGGAACAAATCGGTTCCATGGACTTC +
Preference number: 6 (lower is better)
Translates to: HGDTQVYLSVPA*GEQEQIGSMDF
Trigger: GAAGTCCATGGAACCGATTTGTTCCTGCTCTCCGCATGCGGGTACTGATAGGTAGACCTGTGTGTCTCCATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560083.1
ENST00000573919.1
CDS CCA 72 bp ATCAAGGTTGCTGTCACTAGGCCCCGCCCTCAACAATaGCACAGAATTGTCCACGAGCGATGTTGCAAAACG +
Preference number: 6 (lower is better)
Translates to: IKVAVTRPRPQQ*HRIVHERCCKT
Trigger: CGTTTTGCAACATCGCTCGTGGACAATTCTGTGCCATTGTTGAGGGCGGGGCCTAGTGACAGCAACCTTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000411702.7
ENST00000508628.6
ENST00000558116.5
ENST00000559864.1
ENST00000582970.5
CDS CCA 72 bp TTCCTGGCGGAGTCACACAGTTTCCTGGGCAGGTACTaGTCCTTATCCAGAGCCTTCCACAGCTTTTTCAGA +
Preference number: 6 (lower is better)
Translates to: FLAESHSFLGRY*SLSRAFHSFFR
Trigger: TCTGAAAAAGCTGTGGAAGGCTCTGGATAAGGACCAGTACCTGCCCAGGAAACTGTGTGACTCCGCCAGGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS CCA 72 bp ATGGCATCGACACTGCCGTTGATGTTGGGCTGCAGATaGAAGCCGATGAATGTCATGGTTGTGTGGTCGTCA +
Preference number: 6 (lower is better)
Translates to: MASTLPLMLGCR*KPMNVMVVWSS
Trigger: TGACGACCACACAACCATGACATTCATCGGCTTCCATCTGCAGCCCAACATCAACGGCAGTGTCGATGCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS CCA 72 bp GTGGACCCCAAGTCGAACCCAATGCTTCATAGCATCTaGACACCCTTTGAAGCTCAAAGGAGTGTGGGGTCA +
Preference number: 6 (lower is better)
Translates to: VDPKSNPMLHSI*TPFEAQRSVGS
Trigger: TGACCCCACACTCCTTTGAGCTTCAAAGGGTGTCCAGATGCTATGAAGCATTGGGTTCGACTTGGGGTCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559864.1
CDS CCA 72 bp ATGCAGGTGGTTTTGGACCCTGAGGCACAAACCACGTaGACCCCAAGTCGAACCCAATGCTTCATAGCATCT +
Preference number: 6 (lower is better)
Translates to: MQVVLDPEAQTT*TPSRTQCFIAS
Trigger: AGATGCTATGAAGCATTGGGTTCGACTTGGGGTCCACGTGGTTTGTGCCTCAGGGTCCAAAACCACCTGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559864.1
CDS CAA 72 bp GAGCTCACGGCTTCAATGATGCATTTCTCGAAGGTCTaGGCCACACTGTCCTCTAAGCCTTTGGTGTCCCAG +
Preference number: 6 (lower is better)
Translates to: ELTASMMHFSKV*ATLSSKPLVSQ
Trigger: CTGGGACACCAAAGGCTTAGAGGACAGTGTGGCCAAGACCTTCGAGAAATGCATCATTGAAGCCGTGAGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319921.4
ENST00000508628.6
ENST00000559070.5
ENST00000582970.5
CDS CAA 72 bp CTGTCACTAGGCCCCGCCCTCAACAATGGCACAGAATaGTCCACGAGCGATGTTGCAAAACGGCTGATATCA +
Preference number: 6 (lower is better)
Translates to: LSLGPALNNGTE*STSDVAKRLIS
Trigger: TGATATCAGCCGTTTTGCAACATCGCTCGTGGACAATTCTGTGCCATTGTTGAGGGCGGGGCCTAGTGACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000411702.7
ENST00000508628.6
ENST00000558116.5
ENST00000559864.1
ENST00000582970.5
CDS CAA 72 bp CTGCTGGATGTAGAGCTTTTCAGCAACGTCACTCAGTaGTCCAAAGTCCCACACCAGAGGAATCAGGCTCGG +
Preference number: 6 (lower is better)
Translates to: LLDVELFSNVTQ*SKVPHQRNQAR
Trigger: CCGAGCCTGATTCCTCTGGTGTGGGACTTTGGACAACTGAGTGACGTTGCTGAAAAGCTCTACATCCAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS CAA 90 bp TGGCAGGCTGAGCTCACGGCTTCAATGATGCATTTCTCGAAGGTCTaGGCCACACTGTCCTCTAAGCCTTTGGTGTCCCAGCAACTATTG +
Preference number: 6 (lower is better)
Translates to: WQAELTASMMHFSKV*ATLSSKPLVSQQLL
Trigger: CAATAGTTGCTGGGACACCAAAGGCTTAGAGGACAGTGTGGCCAAGACCTTCGAGAAATGCATCATTGAAGCCGTGAGCTCAGCCTGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319921.4
ENST00000508628.6
ENST00000559070.5
ENST00000582970.5
CDS CAA 90 bp TCAAGGTTGCTGTCACTAGGCCCCGCCCTCAACAATGGCACAGAATaGTCCACGAGCGATGTTGCAAAACGGCTGATATCAGGAGGTGAA +
Preference number: 6 (lower is better)
Translates to: SRLLSLGPALNNGTE*STSDVAKRLISGGE
Trigger: TTCACCTCCTGATATCAGCCGTTTTGCAACATCGCTCGTGGACAATTCTGTGCCATTGTTGAGGGCGGGGCCTAGTGACAGCAACCTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000411702.7
ENST00000508628.6
ENST00000558116.5
ENST00000559864.1
ENST00000582970.5
CDS CAA 90 bp TCGCTGATGTCCTGGAGCAGCTTTTTGGCCTGGATGAGCTCCTGGTaGATCTGGTCCAGTGTTTCACGGCGAAAGTCGTCGAAGTTATCA +
Preference number: 6 (lower is better)
Translates to: SLMSWSSFLAWMSSW*IWSSVSRRKSSKLS
Trigger: TGATAACTTCGACGACTTTCGCCGTGAAACACTGGACCAGATCAACCAGGAGCTCATCCAGGCCAAAAAGCTGCTCCAGGACATCAGCGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000508628.6
ENST00000559070.5
ENST00000582970.5
CDS CAA 90 bp GCAGTTGTTCCTCCGTGCACCTTGACCAGCTTTATGGTGTCAGCATaGGTACCACCACGCCGCAGGTCGCTAAGGAATTTAATAAGCCTG +
Preference number: 6 (lower is better)
Translates to: AVVPPCTLTSFMVSA*VPPRRRSLRNLISL
Trigger: CAGGCTTATTAAATTCCTTAGCGACCTGCGGCGTGGTGGTACCAATGCTGACACCATAAAGCTGGTCAAGGTGCACGGAGGAACAACTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS CAA 90 bp GAGAGCAGGCTCTCAATCACTTCCTTCTCAGGCGGAGCGTTGTCCTaGAAGCAAATGGTGGACACCAGGTCTACGAAGAAACTGTTGCAC +
Preference number: 6 (lower is better)
Translates to: ESRLSITSFSGGALS*KQMVDTRSTKKLLH
Trigger: GTGCAACAGTTTCTTCGTAGACCTGGTGTCCACCATTTGCTTCAAGGACAACGCTCCGCCTGAGAAGGAAGTGATTGAGAGCCTGCTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000508628.6
ENST00000558116.5
ENST00000582970.5
CDS CAA 90 bp AGGAGAGAGAGCAGGCTCTCAATCACTTCCTTCTCAGGCGGAGCGTaGTCCTTGAAGCAAATGGTGGACACCAGGTCTACGAAGAAACTG +
Preference number: 6 (lower is better)
Translates to: RRESRLSITSFSGGA*SLKQMVDTRSTKKL
Trigger: CAGTTTCTTCGTAGACCTGGTGTCCACCATTTGCTTCAAGGACAACGCTCCGCCTGAGAAGGAAGTGATTGAGAGCCTGCTCTCTCTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000508628.6
ENST00000558116.5
ENST00000582970.5
CDS CAA 90 bp AGGAATGTGCTGAGGAGCTTAGCATTTTCCGGGCTCAGATCCGCTTaGTACCTTGAACTGATTTCCCCAAATGGCTCTTTGTGCAGCCGC +
Preference number: 6 (lower is better)
Translates to: RNVLRSLAFSGLRSA*YLELISPNGSLCSR
Trigger: GCGGCTGCACAAAGAGCCATTTGGGGAAATCAGTTCAAGGTACAAAGCGGATCTGAGCCCGGAAAATGCTAAGCTCCTCAGCACATTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000411702.7
ENST00000427003.7
ENST00000508628.6
ENST00000560083.1
ENST00000582970.5
CDS CAA 90 bp TCTGTGTCACTCCTCAGGGCACTCAGCTCCATGTCTATCACCTCTTaGGGAGGCCTGCAGGTGACTTTTGGGAAGATGTCAAGAAAACTG +
Preference number: 6 (lower is better)
Translates to: SVSLLRALSSMSITS*GGLQVTFGKMSRKL
Trigger: CAGTTTTCTTGACATCTTCCCAAAAGTCACCTGCAGGCCTCCCAAAGAGGTGATAGACATGGAGCTGAGTGCCCTGAGGAGTGACACAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS CAA 90 bp TCGGGCAAATTGGCCAGAAAGATGTCCAAAGCTTGGATGTCATCCTaGCCACTGAAGTTCCTAAGGACAGCCTGTGCAATGTCTTGCGGG +
Preference number: 6 (lower is better)
Translates to: SGKLARKMSKAWMSS*PLKFLRTACAMSCG
Trigger: CCCGCAAGACATTGCACAGGCTGTCCTTAGGAACTTCAGTGGCAAGGATGACATCCAAGCTTTGGACATCTTTCTGGCCAATTTGCCCGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS CAA 90 bp ATGTTCTGTTTGATCAGCTGCATGGGGCTGACTTCCTCTGAGCACTaGGCCTCGGGCAAATTGGCCAGAAAGATGTCCAAAGCTTGGATG +
Preference number: 6 (lower is better)
Translates to: MFCLISCMGLTSSEH*ASGKLARKMSKAWM
Trigger: CATCCAAGCTTTGGACATCTTTCTGGCCAATTTGCCCGAGGCCAAGTGCTCAGAGGAAGTCAGCCCCATGCAGCTGATCAAACAGAACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS CAA 90 bp TTCACACGATTGATGTTTCTGCAGAGCTGGGTGTACTCTTGGTCCTaGGGGAAACCAGAACCAAAAATAATCTCCGGCTGCTGGTCCCCC +
Preference number: 6 (lower is better)
Translates to: FTRLMFLQSWVYSWS*GKPEPKIISGCWSP
Trigger: GGGGGACCAGCAGCCGGAGATTATTTTTGGTTCTGGTTTCCCCAAGGACCAAGAGTACACCCAGCTCTGCAGAAACATCAATCGTGTGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS CAA 90 bp TTGTCCTTGAAGCAAATGGTGGACACCAGGTCTACGAAGAAACTGTaGCACATCTGCCGGAAGCGGGCATGCTTTTCAATGGCTTCCCTG +
Preference number: 6 (lower is better)
Translates to: LSLKQMVDTRSTKKL*HICRKRACFSMASL
Trigger: CAGGGAAGCCATTGAAAAGCATGCCCGCTTCCGGCAGATGTGCAACAGTTTCTTCGTAGACCTGGTGTCCACCATTTGCTTCAAGGACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000508628.6
ENST00000558116.5
ENST00000582970.5
CDS TCA 72 bp GACTTGCTCAAGTCCCGGAAGCCGGTAGTAAATCCCTaGAAGACAGTCCAGGATATGAGCAGGAAAACGACC +
Preference number: 6 (lower is better)
Translates to: DLLKSRKPVVNP*KTVQDMSRKTT
Trigger: GGTCGTTTTCCTGCTCATATCCTGGACTGTCTTTCAGGGATTTACTACCGGCTTCCGGGACTTGAGCAAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319921.4
ENST00000508628.6
ENST00000559070.5
ENST00000582970.5
CDS TCA 72 bp TTCATGCAGTTTCAGACACACAGTCAGGTAGGATGGTaGCAAGGCCTCCTCGGGAATCTTGTCCCGGTAAGT +
Preference number: 6 (lower is better)
Translates to: FMQFQTHSQVGW*QGLLGNLVPVS
Trigger: ACTTACCGGGACAAGATTCCCGAGGAGGCCTTGTCACCATCCTACCTGACTGTGTGTCTGAAACTGCATGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319921.4
ENST00000508628.6
ENST00000559070.5
ENST00000582970.5
CDS TCA 72 bp CATTTTCCGGGCTCAGATCCGCTTTGTACCTTGAACTaGTTTCCCCAAATGGCTCTTTGTGCAGCCGCAGCA +
Preference number: 6 (lower is better)
Translates to: HFPGSDPLCTLN*FPQMALCAAAA
Trigger: TGCTGCGGCTGCACAAAGAGCCATTTGGGGAAATCAGTTCAAGGTACAAAGCGGATCTGAGCCCGGAAAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000411702.7
ENST00000427003.7
ENST00000508628.6
ENST00000560083.1
ENST00000582970.5
CDS TCA 72 bp AAGCTGCACTCATCTTCTGTTTTCCTCATGAAACCCTaGGAGGCGCAGAGGACTTCTGTGATCACGCGAGTC +
Preference number: 6 (lower is better)
Translates to: KLHSSSVFLMKP*EAQRTSVITRV
Trigger: GACTCGCGTGATCACAGAAGTCCTCTGCGCCTCTCAGGGTTTCATGAGGAAAACAGAAGATGAGTGCAGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS TCA 72 bp AGAGGGGAATCTTCAGCTCGATGCAGACGACCATCATaGAGACGTTCTCCTTCAAGGCCAAGTTCTTGGCGA +
Preference number: 6 (lower is better)
Translates to: RGESSARCRRPS*RRSPSRPSSWR
Trigger: TCGCCAAGAACTTGGCCTTGAAGGAGAACGTCTTCATGATGGTCGTCTGCATCGAGCTGAAGATTCCCCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS TCA 72 bp ATGGGCTGCATCAGTGGTCCATCACCCTGCATCATTTaGCATAAACCAGGGAACATGCAGGCTCCAAGGGAT +
Preference number: 6 (lower is better)
Translates to: MGCISGPSPCII*HKPGNMQAPRD
Trigger: ATCCCTTGGAGCCTGCATGTTCCCTGGTTTATGTCAAATGATGCAGGGTGATGGACCACTGATGCAGCCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573038.1
CDS GCA 72 bp GGTCTTCTCTTTCATTTCCTTCCCGGCCCCTTTAACTaGATTGGCTGGCTCAGCTACAGCATCAACTGCCAT +
Preference number: 6 (lower is better)
Translates to: GLLFHFLPGPFN*IGWLSYSINCH
Trigger: ATGGCAGTTGATGCTGTAGCTGAGCCAGCCAATGCAGTTAAAGGGGCCGGGAAGGAAATGAAAGAGAAGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319921.4
ENST00000508628.6
ENST00000559070.5
ENST00000582970.5
CDS GCA 72 bp CTCCAAGAGTTCATTCTGTCCACACAGAAGGACGGCTaGAGCATGAATGGCCATTTCTGTCACCGTTCCATC +
Preference number: 6 (lower is better)
Translates to: LQEFILSTQKDG*SMNGHFCHRSI
Trigger: GATGGAACGGTGACAGAAATGGCCATTCATGCTGCAGCCGTCCTTCTGTGTGGACAGAATGAACTCTTGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000411702.7
ENST00000508628.6
ENST00000558116.5
ENST00000559864.1
ENST00000582970.5
CDS GCA 72 bp CTTCCTGAGCTCAGTGCTCAGGTAAACCAGCTGCTCTaGCGTGTAGAAGTTCAGGTAAAAGTGCTCCATTCG +
Preference number: 6 (lower is better)
Translates to: LPELSAQVNQLL*RVEVQVKVLHS
Trigger: CGAATGGAGCACTTTTACCTGAACTTCTACACGGCAGAGCAGCTGGTTTACCTGAGCACTGAGCTCAGGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS GCA 72 bp AGTGAAACAGGAAATGCTGGAGGCATTCCTCCGGGGTaGCTTCGACAGAGCCTTCTTGATACTGAAACGTGT +
Preference number: 6 (lower is better)
Translates to: SETGNAGGIPPG*LRQSLLDTETC
Trigger: ACACGTTTCAGTATCAAGAAGGCTCTGTCGAAGGCACCCCGGAGGAATGCCTCCAGCATTTCCTGTTTCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS GCA 72 bp CCAGCTGACTCCAAACGGCAGATCATCTCCTCAGAGTaGTTCCGGTATGGATTGCAGGCAGCTATAATATGC +
Preference number: 6 (lower is better)
Translates to: PADSKRQIISSE*FRYGLQAAIIC
Trigger: GCATATTATAGCTGCCTGCAATCCATACCGGAAGCACTCTGAGGAGATGATCTGCCGTTTGGAGTCAGCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS GCA 72 bp TTTCCTCAGAGGTACGCCGTCCAGAAAAAGATCCTGTaGCCGTGTTATTTCATCCAGAAGCAGCCTGCTGTC +
Preference number: 6 (lower is better)
Translates to: FPQRYAVQKKIL*PCYFIQKQPAV
Trigger: GACAGCAGGCTGCTTCTGGATGAAATAACACGGGCACAGGATCTTTTTCTGGACGGCGTACCTCTGAGGAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS GCA 72 bp GAGGCACAAACCACGTGGACCCCAAGTCGAACCCAATaGTTCATAGCATCTGGACACCCTTTGAAGCTCAAA +
Preference number: 6 (lower is better)
Translates to: EAQTTWTPSRTQ*FIASGHPLKLK
Trigger: TTTGAGCTTCAAAGGGTGTCCAGATGCTATGAAGCATTGGGTTCGACTTGGGGTCCACGTGGTTTGTGCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559864.1
CDS CCA 72 bp CATTCTGTCCACACAGAAGGACGGCTGCAGCATGAATaGCCATTTCTGTCACCGTTCCATCAAGGTTGCTGT +
Preference number: 6 (lower is better)
Translates to: HSVHTEGRLQHE*PFLSPFHQGCC
Trigger: ACAGCAACCTTGATGGAACGGTGACAGAAATGGCCATTCATGCTGCAGCCGTCCTTCTGTGTGGACAGAATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000411702.7
ENST00000508628.6
ENST00000558116.5
ENST00000559864.1
ENST00000582970.5
CDS CCA 72 bp AGCAGCTTTTTGGCCTGGATGAGCTCCTGGTTGATCTaGTCCAGTGTTTCACGGCGAAAGTCGTCGAAGTTA +
Preference number: 6 (lower is better)
Translates to: SSFLAWMSSWLI*SSVSRRKSSKL
Trigger: TAACTTCGACGACTTTCGCCGTGAAACACTGGACCAGATCAACCAGGAGCTCATCCAGGCCAAAAAGCTGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000508628.6
ENST00000559070.5
ENST00000582970.5
CDS CCA 72 bp CAAACGGCAGATCATCTCCTCAGAGTGCTTCCGGTATaGATTGCAGGCAGCTATAATATGCAGGCCAGAGTC +
Preference number: 6 (lower is better)
Translates to: QTADHLLRVLPV*IAGSYNMQARV
Trigger: GACTCTGGCCTGCATATTATAGCTGCCTGCAATCCATACCGGAAGCACTCTGAGGAGATGATCTGCCGTTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS CCA 72 bp CTTTCTTTTCTAAAGAGGCATGGTAACACACCCCGATaGCCAGCATCAACGACCAGAGGACGGGATCTCTCT +
Preference number: 6 (lower is better)
Translates to: LSFLKRHGNTPR*PASTTRGRDLS
Trigger: AGAGAGATCCCGTCCTCTGGTCGTTGATGCTGGCCATCGGGGTGTGTTACCATGCCTCTTTAGAAAAGAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS CCA 72 bp ATGTCTGCTGCAGGATCTGCAGTGCCACGTAGTTTTTaGTCAGCACGAGTAAGTAGCGGGACTCAGCATCTT +
Preference number: 6 (lower is better)
Translates to: MSAAGSAVPRSF*SARVSSGTQHL
Trigger: AAGATGCTGAGTCCCGCTACTTACTCGTGCTGACCAAAAACTACGTGGCACTGCAGATCCTGCAGCAGACAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS CAA 72 bp GCTTCACATTGCTCTGGCGTGGGGTGGAGGCTTGCATaGTGGGATCTGTACAAAATAGCCACCTCTCTAAAC +
Preference number: 6 (lower is better)
Translates to: ASHCSGVGWRLA*WDLYKIATSLN
Trigger: GTTTAGAGAGGTGGCTATTTTGTACAGATCCCACAATGCAAGCCTCCACCCCACGCCAGAGCAATGTGAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411702.7
ENST00000508628.6
ENST00000558116.5
ENST00000582970.5
CDS CAA 72 bp TCAGGAGGTGAAAGGATCTTGCATTCGCCAATGAATTaGCTCACAGCTTCACATTGCTCTGGCGTGGGGTGG +
Preference number: 6 (lower is better)
Translates to: SGGERILHSPMN*LTASHCSGVGW
Trigger: CCACCCCACGCCAGAGCAATGTGAAGCTGTGAGCAAATTCATTGGCGAATGCAAGATCCTTTCACCTCCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000411702.7
ENST00000508628.6
ENST00000558116.5
ENST00000559864.1
ENST00000582970.5
CDS CAA 72 bp ACCATCATGAAGACGTTCTCCTTCAAGGCCAAGTTCTaGGCGATGGTTTTCCTCAGAGGTACGCCGTCCAGA +
Preference number: 6 (lower is better)
Translates to: TIMKTFSFKAKF*AMVFLRGTPSR
Trigger: TCTGGACGGCGTACCTCTGAGGAAAACCATCGCCAAGAACTTGGCCTTGAAGGAGAACGTCTTCATGATGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS CAA 72 bp GGCCTCGGGCAAATTGGCCAGAAAGATGTCCAAAGCTaGGATGTCATCCTTGCCACTGAAGTTCCTAAGGAC +
Preference number: 6 (lower is better)
Translates to: GLGQIGQKDVQS*DVILATEVPKD
Trigger: GTCCTTAGGAACTTCAGTGGCAAGGATGACATCCAAGCTTTGGACATCTTTCTGGCCAATTTGCCCGAGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS CAA 72 bp AGTCGAACCCAATGCTTCATAGCATCTGGACACCCTTaGAAGCTCAAAGGAGTGTGGGGTCATCTAGACCCC +
Preference number: 6 (lower is better)
Translates to: SRTQCFIASGHP*KLKGVWGHLDP
Trigger: GGGGTCTAGATGACCCCACACTCCTTTGAGCTTCAAAGGGTGTCCAGATGCTATGAAGCATTGGGTTCGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559864.1
CDS CAA 90 bp ATGCAGACGACCATCATGAAGACGTTCTCCTTCAAGGCCAAGTTCTaGGCGATGGTTTTCCTCAGAGGTACGCCGTCCAGAAAAAGATCC +
Preference number: 6 (lower is better)
Translates to: MQTTIMKTFSFKAKF*AMVFLRGTPSRKRS
Trigger: GGATCTTTTTCTGGACGGCGTACCTCTGAGGAAAACCATCGCCAAGAACTTGGCCTTGAAGGAGAACGTCTTCATGATGGTCGTCTGCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS CAA 90 bp AACTGGCTCTCTTCTTGCTTCTTTAAAAAGACACTGAGGCGCATCTaGGATACCCGCAAGAAAGAGGCGTGGCACGCGTCATCCTCATTC +
Preference number: 6 (lower is better)
Translates to: NWLSSCFFKKTLRRI*DTRKKEAWHASSSF
Trigger: GAATGAGGATGACGCGTGCCACGCCTCTTTCTTGCGGGTATCCAAGATGCGCCTCAGTGTCTTTTTAAAGAAGCAAGAAGAGAGCCAGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000508628.6
ENST00000558116.5
ENST00000582970.5
CDS TCA 72 bp AACTCATCTGGTGAGCTGGCATCTGAGGTTAGGAGGTaGCACAACCAGTCCAGGCTGCCTTCTAATAAAAGC +
Preference number: 6 (lower is better)
Translates to: NSSGELASEVRR*HNQSRLPSNKS
Trigger: GCTTTTATTAGAAGGCAGCCTGGACTGGTTGTGTCACCTCCTAACCTCAGATGCCAGCTCACCAGATGAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319921.4
ENST00000508628.6
ENST00000559070.5
ENST00000582970.5
CDS TCA 72 bp CTTAGCATTTTCCGGGCTCAGATCCGCTTTGTACCTTaGACTGATTTCCCCAAATGGCTCTTTGTGCAGCCG +
Preference number: 6 (lower is better)
Translates to: LSIFRAQIRFVP*TDFPKWLFVQP
Trigger: CGGCTGCACAAAGAGCCATTTGGGGAAATCAGTTCAAGGTACAAAGCGGATCTGAGCCCGGAAAATGCTAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000411702.7
ENST00000427003.7
ENST00000508628.6
ENST00000560083.1
ENST00000582970.5
CDS TCA 72 bp TCGATTCCATTTCAGCACAGCAGCTGTTTTCCACACTaGGACACAGCTGGCGAGCAGTATCTCTTCTGGGAA +
Preference number: 6 (lower is better)
Translates to: SIPFQHSSCFPH*DTAGEQYLFWE
Trigger: TTCCCAGAAGAGATACTGCTCGCCAGCTGTGTCTCAGTGTGGAAAACAGCTGCTGTGCTGAAATGGAATCGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000411702.7
ENST00000427003.7
ENST00000508628.6
ENST00000560083.1
ENST00000582970.5
CDS TCA 72 bp AGTAGATCATGTCTGCAGTTGTTCCTCCGTGCACCTTaGCCAGCTTTATGGTGTCAGCATTGGTACCACCAC +
Preference number: 6 (lower is better)
Translates to: SRSCLQLFLRAP*PALWCQHWYHH
Trigger: GTGGTGGTACCAATGCTGACACCATAAAGCTGGTCAAGGTGCACGGAGGAACAACTGCAGACATGATCTACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS TCA 72 bp TCTCAATCACTTCCTTCTCAGGCGGAGCGTTGTCCTTaGAGCAAATGGTGGACACCAGGTCTACGAAGAAAC +
Preference number: 6 (lower is better)
Translates to: SQSLPSQAERCP*SKWWTPGLRRN
Trigger: GTTTCTTCGTAGACCTGGTGTCCACCATTTGCTTCAAGGACAACGCTCCGCCTGAGAAGGAAGTGATTGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000508628.6
ENST00000558116.5
ENST00000582970.5
CDS TCA 72 bp CCACCCCACATTAGTAGCTTTATGAAGGGTGTTGAGTaGCAGGCATGGTGGCTTCCTGTTCCTTGGTTCTGT +
Preference number: 6 (lower is better)
Translates to: PPHISSFMKGVE*QAWWLPVPWFC
Trigger: ACAGAACCAAGGAACAGGAAGCCACCATGCCTGTCACTCAACACCCTTCATAAAGCTACTAATGTGGGGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559603.1
CDS GCA 72 bp CTCTTTCTCCCTGTACTGCAAATCGGTCCACAGCTGTaGCTGTCCTTCATAAATCATAGGCTGTTGCAGGAC +
Preference number: 6 (lower is better)
Translates to: LFLPVLQIGPQL*LSFINHRLLQD
Trigger: GTCCTGCAACAGCCTATGATTTATGAAGGACAGGCACAGCTGTGGACCGATTTGCAGTACAGGGAGAAAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319921.4
ENST00000508628.6
ENST00000559070.5
ENST00000582970.5
CDS GCA 72 bp TTGAAAACGGCTGTGTACAAACCTACCACACAGGTGTaGCACCATTTCCACAGTCACTGCCCTAACGTTGCT +
Preference number: 6 (lower is better)
Translates to: LKTAVYKPTTQV*HHFHSHCPNVA
Trigger: AGCAACGTTAGGGCAGTGACTGTGGAAATGGTGGCACACCTGTGTGGTAGGTTTGTACACAGCCGTTTTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559070.5
CDS CCA 72 bp ATAGGCTGTTGCAGGACAAAGCAAAACTGCTCGAACTaGGTGAAGAAGCTGTTCAGGTTGATGGTGTCCCAG +
Preference number: 6 (lower is better)
Translates to: IGCCRTKQNCSN*VKKLFRLMVSQ
Trigger: CTGGGACACCATCAACCTGAACAGCTTCTTCACCCAGTTCGAGCAGTTTTGCTTTGTCCTGCAACAGCCTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319921.4
ENST00000508628.6
ENST00000559070.5
ENST00000582970.5
CDS CCA 72 bp TCGACTCGGTCCTTGATCCAATCTCTTTGGTCCTGGTaGTCCACGGTGCACATGATCTTAAGTTCTGAATCC +
Preference number: 6 (lower is better)
Translates to: STRSLIQSLWSW*STVHMILSSES
Trigger: GGATTCAGAACTTAAGATCATGTGCACCGTGGACCACCAGGACCAAAGAGATTGGATCAAGGACCGAGTCGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000508628.6
ENST00000559070.5
ENST00000582970.5
CDS CCA 72 bp GACTCTCATTCACAGTCTTCAGCCATTCCAAGTTCCTaGCGGAGTCACACTATGGGGACAAAAGGAGAGAAC +
Preference number: 6 (lower is better)
Translates to: DSHSQSSAIPSS*RSHTMGTKGEN
Trigger: GTTCTCTCCTTTTGTCCCCATAGTGTGACTCCGCCAGGAACTTGGAATGGCTGAAGACTGTGAATGAGAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571908.1
CDS CAA 72 bp TTCTCTTTCATTTCCTTCCCGGCCCCTTTAACTGCATaGGCTGGCTCAGCTACAGCATCAACTGCCATAGAG +
Preference number: 6 (lower is better)
Translates to: FSFISFPAPLTA*AGSATASTAIE
Trigger: CTCTATGGCAGTTGATGCTGTAGCTGAGCCAGCCAATGCAGTTAAAGGGGCCGGGAAGGAAATGAAAGAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319921.4
ENST00000508628.6
ENST00000559070.5
ENST00000582970.5
CDS CAA 72 bp TTACCGACTTTTTCTTCAGCAGCAGCCATCTCGTCCTaGGTCTTGGTCTCAGCTTCCTGGCAGTGTGTTTTG +
Preference number: 6 (lower is better)
Translates to: LPTFSSAAAISS*VLVSASWQCVL
Trigger: CAAAACACACTGCCAGGAAGCTGAGACCAAGACCAAGGACGAGATGGCTGCTGCTGAAGAAAAAGTCGGTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000319921.4
ENST00000508628.6
ENST00000559070.5
ENST00000582970.5
CDS CAA 72 bp ATAAATCAGCACACAACTGTGATGGTGATTGATCCTTaGACACGCACGCTCTGTGTGGACGACACGTGCTCC +
Preference number: 6 (lower is better)
Translates to: INQHTTVMVIDP*TRTLCVDDTCS
Trigger: GGAGCACGTGTCGTCCACACAGAGCGTGCGTGTCAAAGGATCAATCACCATCACAGTTGTGTGCTGATTTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411702.7
ENST00000558116.5
CDS CAA 72 bp CTTGATCTGTTCGACTCGGTCCTTGATCCAATCTCTTaGGTCCTGGTGGTCCACGGTGCACATGATCTTAAG +
Preference number: 6 (lower is better)
Translates to: LDLFDSVLDPIS*VLVVHGAHDLK
Trigger: CTTAAGATCATGTGCACCGTGGACCACCAGGACCAAAGAGATTGGATCAAGGACCGAGTCGAACAGATCAAG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000508628.6
ENST00000559070.5
ENST00000582970.5
CDS CAA 72 bp TCTTCTTGCTTCTTTAAAAAGACACTGAGGCGCATCTaGGATACCCGCAAGAAAGAGGCGTGGCACGCGTCA +
Preference number: 6 (lower is better)
Translates to: SSCFFKKTLRRI*DTRKKEAWHAS
Trigger: TGACGCGTGCCACGCCTCTTTCTTGCGGGTATCCAAGATGCGCCTCAGTGTCTTTTTAAAGAAGCAAGAAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000508628.6
ENST00000558116.5
ENST00000582970.5
CDS CAA 72 bp AAGCAAATGGTGGACACCAGGTCTACGAAGAAACTGTaGCACATCTGCCGGAAGCGGGCATGCTTTTCAATG +
Preference number: 6 (lower is better)
Translates to: KQMVDTRSTKKL*HICRKRACFSM
Trigger: CATTGAAAAGCATGCCCGCTTCCGGCAGATGTGCAACAGTTTCTTCGTAGACCTGGTGTCCACCATTTGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000508628.6
ENST00000558116.5
ENST00000582970.5
CDS CAA 90 bp TTGCTCACAGCTTCACATTGCTCTGGCGTGGGGTGGAGGCTTGCATaGTGGGATCTGTACAAAATAGCCACCTCTCTAAACAGTGTTAAC +
Preference number: 6 (lower is better)
Translates to: LLTASHCSGVGWRLA*WDLYKIATSLNSVN
Trigger: GTTAACACTGTTTAGAGAGGTGGCTATTTTGTACAGATCCCACAATGCAAGCCTCCACCCCACGCCAGAGCAATGTGAAGCTGTGAGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411702.7
ENST00000508628.6
ENST00000558116.5
ENST00000582970.5
CDS TCA 72 bp GCACAGAATTGTCCACGAGCGATGTTGCAAAACGGCTaGTATCAGGAGGTGAAAGGATCTTGCATTCGCCAA +
Preference number: 6 (lower is better)
Translates to: AQNCPRAMLQNG*YQEVKGSCIRQ
Trigger: TTGGCGAATGCAAGATCCTTTCACCTCCTGATATCAGCCGTTTTGCAACATCGCTCGTGGACAATTCTGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000411702.7
ENST00000508628.6
ENST00000558116.5
ENST00000559864.1
ENST00000582970.5
CDS TCA 72 bp ATCTCCTCAGTTTGTTCCATGTGGACAGAAAGACTGTaGTCCTGTTGTGAAGCAGCTGCCTCAACCCATCTG +
Preference number: 6 (lower is better)
Translates to: ISSVCSMWTERL*SCCEAAASTHL
Trigger: CAGATGGGTTGAGGCAGCTGCTTCACAACAGGATCACAGTCTTTCTGTCCACATGGAACAAACTGAGGAGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000411702.7
ENST00000427003.7
ENST00000508628.6
ENST00000570776.1
ENST00000582970.5
CDS TCA 72 bp CTGATAATTCAGGAACCGAGCAAAGTTCCGAAGCTCTaGCCAGGATGGGTTTATTACCCCGCAGTGAAACAG +
Preference number: 6 (lower is better)
Translates to: LIIQEPSKVPKL*PGWVYYPAVKQ
Trigger: CTGTTTCACTGCGGGGTAATAAACCCATCCTGGTCAGAGCTTCGGAACTTTGCTCGGTTCCTGAATTATCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS GCA 72 bp GACCCAAGTCTCTGGTGTAGTGCAGCTCACAGATATTaGTGTCCCATTTTGACTCCCCAAATTCTTCTCCTC +
Preference number: 6 (lower is better)
Translates to: DPSLWCSAAHRY*CPILTPQILLL
Trigger: GAGGAGAAGAATTTGGGGAGTCAAAATGGGACAGCAATATCTGTGAGCTGCACTACACCAGAGACTTGGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319921.4
ENST00000508628.6
ENST00000559070.5
ENST00000573548.1
ENST00000582970.5
CDS GCA 72 bp TTGCTGAGGAAGCCTCTGATGGAGCTGTATTCAACTTaGTGGACGTTCTGGAACTGCTTCACTAGATCCCTT +
Preference number: 6 (lower is better)
Translates to: LLRKPLMELYST*WTFWNCFTRSL
Trigger: AAGGGATCTAGTGAAGCAGTTCCAGAACGTCCAGCAAGTTGAATACAGCTCCATCAGAGGCTTCCTCAGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000411702.7
ENST00000427003.7
ENST00000508628.6
ENST00000570776.1
ENST00000582970.5
CDS CCA 72 bp GATGTGCTGCTGCAGAAAGCCTTTTGGATCCCTCACTaGAGGCTTAATGATGTTTATCAGAGCCTGGGAACT +
Preference number: 6 (lower is better)
Translates to: DVLLQKAFWIPH*RLNDVYQSLGT
Trigger: AGTTCCCAGGCTCTGATAAACATCATTAAGCCTCCAGTGAGGGATCCAAAAGGCTTTCTGCAGCAGCACATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411702.7
ENST00000508628.6
ENST00000558116.5
ENST00000582970.5
CDS CCA 72 bp CAGGTCCTTCAGGATGTGCTGCTGCAGAAAGCCTTTTaGATCCCTCACTGGAGGCTTAATGATGTTTATCAG +
Preference number: 6 (lower is better)
Translates to: QVLQDVLLQKAF*IPHWRLNDVYQ
Trigger: CTGATAAACATCATTAAGCCTCCAGTGAGGGATCCAAAAGGCTTTCTGCAGCAGCACATCCTGAAGGACCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411702.7
ENST00000508628.6
ENST00000558116.5
ENST00000582970.5
CDS CCA 72 bp CCTCTGATGGAGCTGTATTCAACTTGCTGGACGTTCTaGAACTGCTTCACTAGATCCCTTTGCAAGGCCAAA +
Preference number: 6 (lower is better)
Translates to: PLMELYSTCWTF*NCFTRSLCKAK
Trigger: TTTGGCCTTGCAAAGGGATCTAGTGAAGCAGTTCCAGAACGTCCAGCAAGTTGAATACAGCTCCATCAGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000411702.7
ENST00000427003.7
ENST00000508628.6
ENST00000570776.1
ENST00000582970.5
CDS CCA 72 bp TGTTCGACTCGGTCCTTGATCCAATCTCTTTGGTCCTaGTGGTCCACGGTGCACATGATCTTAAGTTCTGAA +
Preference number: 6 (lower is better)
Translates to: CSTRSLIQSLWS*WSTVHMILSSE
Trigger: TTCAGAACTTAAGATCATGTGCACCGTGGACCACCAGGACCAAAGAGATTGGATCAAGGACCGAGTCGAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000508628.6
ENST00000559070.5
ENST00000582970.5
CDS CCA 72 bp TTGATCTGTTCGACTCGGTCCTTGATCCAATCTCTTTaGTCCTGGTGGTCCACGGTGCACATGATCTTAAGT +
Preference number: 6 (lower is better)
Translates to: LICSTRSLIQSL*SWWSTVHMILS
Trigger: ACTTAAGATCATGTGCACCGTGGACCACCAGGACCAAAGAGATTGGATCAAGGACCGAGTCGAACAGATCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000508628.6
ENST00000559070.5
ENST00000582970.5
CDS CCA 72 bp GCAGCCTGCTGTCGTCATACGGTTTCGGAAAGAACCTaGCGATGGCTTTCCGATATGAGTCTTTCTTTTCTA +
Preference number: 6 (lower is better)
Translates to: AACCRHTVSERT*RWLSDMSLSFL
Trigger: TAGAAAAGAAAGACTCATATCGGAAAGCCATCGCCAGGTTCTTTCCGAAACCGTATGACGACAGCAGGCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS CCA 72 bp ATAGCATCTGGACACCCTTTGAAGCTCAAAGGAGTGTaGGGTCATCTAGACCCCAACACTTACTGTACCAGT +
Preference number: 6 (lower is better)
Translates to: IASGHPLKLKGV*GHLDPNTYCTS
Trigger: ACTGGTACAGTAAGTGTTGGGGTCTAGATGACCCCACACTCCTTTGAGCTTCAAAGGGTGTCCAGATGCTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559864.1
CDS CCA 72 bp CAAATCGGTTCCATGGACTTCCCGCTTCAGCAGGCATaGCCATGCATCAACATCATTCCTAAGAATCAAACC +
Preference number: 6 (lower is better)
Translates to: QIGSMDFPLQQA*PCINIIPKNQT
Trigger: GGTTTGATTCTTAGGAATGATGTTGATGCATGGCCATGCCTGCTGAAGCGGGAAGTCCATGGAACCGATTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560083.1
ENST00000573919.1
CDS CCA 72 bp GAGACTGGCTGCGAGACTTGTATTTGTAGCTTAATCTaGTCAGTGTCATTTCCTGTGATGCAGCGTGGAGCT +
Preference number: 6 (lower is better)
Translates to: ETGCETCICSLI*SVSFPVMQRGA
Trigger: AGCTCCACGCTGCATCACAGGAAATGACACTGACCAGATTAAGCTACAAATACAAGTCTCGCAGCCAGTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570776.1
CDS CAA 72 bp ACTTTTTCTTCAGCAGCAGCCATCTCGTCCTTGGTCTaGGTCTCAGCTTCCTGGCAGTGTGTTTTGAAAGGA +
Preference number: 6 (lower is better)
Translates to: TFSSAAAISSLV*VSASWQCVLKG
Trigger: TCCTTTCAAAACACACTGCCAGGAAGCTGAGACCAAGACCAAGGACGAGATGGCTGCTGCTGAAGAAAAAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000319921.4
ENST00000508628.6
ENST00000559070.5
ENST00000582970.5
CDS CAA 72 bp CCACAGCTGTGCCTGTCCTTCATAAATCATAGGCTGTaGCAGGACAAAGCAAAACTGCTCGAACTGGGTGAA +
Preference number: 6 (lower is better)
Translates to: PQLCLSFINHRL*QDKAKLLELGE
Trigger: TTCACCCAGTTCGAGCAGTTTTGCTTTGTCCTGCAACAGCCTATGATTTATGAAGGACAGGCACAGCTGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319921.4
ENST00000508628.6
ENST00000559070.5
ENST00000582970.5
CDS CAA 72 bp CTGAGGAGCTTAGCATTTTCCGGGCTCAGATCCGCTTaGTACCTTGAACTGATTTCCCCAAATGGCTCTTTG +
Preference number: 6 (lower is better)
Translates to: LRSLAFSGLRSA*YLELISPNGSL
Trigger: CAAAGAGCCATTTGGGGAAATCAGTTCAAGGTACAAAGCGGATCTGAGCCCGGAAAATGCTAAGCTCCTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000411702.7
ENST00000427003.7
ENST00000508628.6
ENST00000560083.1
ENST00000582970.5
CDS CAA 72 bp CTGCAGAAGACCTCTGAAAACCTCTCCACTTCCGTGTaGTTACGATCCTTCTTGCCAGACATCAGCATCAAC +
Preference number: 6 (lower is better)
Translates to: LQKTSENLSTSV*LRSFLPDISIN
Trigger: GTTGATGCTGATGTCTGGCAAGAAGGATCGTAACAACACGGAAGTGGAGAGGTTTTCAGAGGTCTTCTGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000508628.6
ENST00000571908.1
ENST00000582970.5
CDS CAA 72 bp TTGGCCAGAAAGATGTCCAAAGCTTGGATGTCATCCTaGCCACTGAAGTTCCTAAGGACAGCCTGTGCAATG +
Preference number: 6 (lower is better)
Translates to: LARKMSKAWMSS*PLKFLRTACAM
Trigger: CATTGCACAGGCTGTCCTTAGGAACTTCAGTGGCAAGGATGACATCCAAGCTTTGGACATCTTTCTGGCCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS CAA 72 bp ACCATCTTGCCTGTTTCCATGCAGATCTTCACACGATaGATGTTTCTGCAGAGCTGGGTGTACTCTTGGTCC +
Preference number: 6 (lower is better)
Translates to: TILPVSMQIFTR*MFLQSWVYSWS
Trigger: GGACCAAGAGTACACCCAGCTCTGCAGAAACATCAATCGTGTGAAGATCTGCATGGAAACAGGCAAGATGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS CAA 72 bp TACTCTACAAGAAAACTTGCTGATTTGCTGTCTTGCTaGCTCTCTGTAAGGGAGGCCGCAGAAACTGTGGGC +
Preference number: 6 (lower is better)
Translates to: YSTRKLADLLSC*LSVREAAETVG
Trigger: GCCCACAGTTTCTGCGGCCTCCCTTACAGAGAGCAAGCAAGACAGCAAATCAGCAAGTTTTCTTGTAGAGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560083.1
ENST00000573919.1
CDS CAA 90 bp CAAATCGGTCCACAGCTGTGCCTGTCCTTCATAAATCATAGGCTGTaGCAGGACAAAGCAAAACTGCTCGAACTGGGTGAAGAAGCTGTT +
Preference number: 6 (lower is better)
Translates to: QIGPQLCLSFINHRL*QDKAKLLELGEEAV
Trigger: AACAGCTTCTTCACCCAGTTCGAGCAGTTTTGCTTTGTCCTGCAACAGCCTATGATTTATGAAGGACAGGCACAGCTGTGGACCGATTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319921.4
ENST00000508628.6
ENST00000559070.5
ENST00000582970.5
CDS CAA 90 bp ACGAGCGATGTTGCAAAACGGCTGATATCAGGAGGTGAAAGGATCTaGCATTCGCCAATGAATTTGCTCACAGCTTCACATTGCTCTGGC +
Preference number: 6 (lower is better)
Translates to: TSDVAKRLISGGERI*HSPMNLLTASHCSG
Trigger: GCCAGAGCAATGTGAAGCTGTGAGCAAATTCATTGGCGAATGCAAGATCCTTTCACCTCCTGATATCAGCCGTTTTGCAACATCGCTCGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000411702.7
ENST00000508628.6
ENST00000558116.5
ENST00000559864.1
ENST00000582970.5
CDS CAA 90 bp CCAACAACTTTCGTCAACACAGAGTCGGCAACAGCTATCAGCCTCTaGGCATCCTCTGTGACATTTGCTAGTATTTTCTCGTCGGTTCCA +
Preference number: 6 (lower is better)
Translates to: PTTFVNTESATAISL*ASSVTFASIFSSVP
Trigger: TGGAACCGACGAGAAAATACTAGCAAATGTCACAGAGGATGCCAAGAGGCTGATAGCTGTTGCCGACTCTGTGTTGACGAAAGTTGTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000508628.6
ENST00000559070.5
ENST00000582970.5
CDS CAA 90 bp CGCCCAGGACTCGGCTCTCATCCACCTGAGGGTCGATCAGTCGAATaGTTTTCAGAGGCACATTTTTCACGTTTAACTGCATCTTCATTT +
Preference number: 6 (lower is better)
Translates to: RPGLGSHPPEGRSVE*FSEAHFSRLTASSF
Trigger: AAATGAAGATGCAGTTAAACGTGAAAAATGTGCCTCTGAAAACAATTCGACTGATCGACCCTCAGGTGGATGAGAGCCGAGTCCTGGGCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS CAA 90 bp AGAAGCAACACCATCTTGCCTGTTTCCATGCAGATCTTCACACGATaGATGTTTCTGCAGAGCTGGGTGTACTCTTGGTCCTTGGGGAAA +
Preference number: 6 (lower is better)
Translates to: RSNTILPVSMQIFTR*MFLQSWVYSWSLGK
Trigger: TTTCCCCAAGGACCAAGAGTACACCCAGCTCTGCAGAAACATCAATCGTGTGAAGATCTGCATGGAAACAGGCAAGATGGTGTTGCTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS CAA 90 bp AAACATTTAATAAATCAGCACACAACTGTGATGGTGATTGATCCTTaGACACGCACGCTCTGTGTGGACGACACGTGCTCCCAGCATGGT +
Preference number: 6 (lower is better)
Translates to: KHLINQHTTVMVIDP*TRTLCVDDTCSQHG
Trigger: ACCATGCTGGGAGCACGTGTCGTCCACACAGAGCGTGCGTGTCAAAGGATCAATCACCATCACAGTTGTGTGCTGATTTATTAAATGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411702.7
ENST00000558116.5
CDS CAA 90 bp ATCTGCTTTTACTCTACAAGAAAACTTGCTGATTTGCTGTCTTGCTaGCTCTCTGTAAGGGAGGCCGCAGAAACTGTGGGCTCACAGCAA +
Preference number: 6 (lower is better)
Translates to: ICFYSTRKLADLLSC*LSVREAAETVGSQQ
Trigger: TTGCTGTGAGCCCACAGTTTCTGCGGCCTCCCTTACAGAGAGCAAGCAAGACAGCAAATCAGCAAGTTTTCTTGTAGAGTAAAAGCAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000560083.1
ENST00000573919.1
CDS TCA 72 bp CACGAGCGATGTTGCAAAACGGCTGATATCAGGAGGTaGAAGGATCTTGCATTCGCCAATGAATTTGCTCAC +
Preference number: 6 (lower is better)
Translates to: HERCCKTADIRR*KDLAFANEFAH
Trigger: GTGAGCAAATTCATTGGCGAATGCAAGATCCTTTCACCTCCTGATATCAGCCGTTTTGCAACATCGCTCGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000411702.7
ENST00000508628.6
ENST00000558116.5
ENST00000559864.1
ENST00000582970.5
CDS TCA 72 bp AACTCGGATTGCAGAAGAGAGAGGCCTCACAATCTCTaGGCTGATAATTCAGGAACCGAGCAAAGTTCCGAA +
Preference number: 6 (lower is better)
Translates to: NSDCRRERPHNL*ADNSGTEQSSE
Trigger: TTCGGAACTTTGCTCGGTTCCTGAATTATCAGCTCAGAGATTGTGAGGCCTCTCTCTTCTGCAATCCGAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS TCA 72 bp CCAGGCTTGCGACCTAAACTTTCATTGTCTAGGATGTaGGAAGCGTCAGCGAGATGTGTCCTTAACATCTCT +
Preference number: 6 (lower is better)
Translates to: PGLRPKLSLSRM*EASARCVLNIS
Trigger: AGAGATGTTAAGGACACATCTCGCTGACGCTTCTCACATCCTAGACAATGAAAGTTTAGGTCGCAAGCCTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558488.1
CDS GCA 72 bp GTCTTAAATACTGGTAAGGTCTTTGGAAAGTTTCGCTaGAGAACTCCCACAGATCCATCCCAGGCTCTGTGT +
Preference number: 6 (lower is better)
Translates to: VLNTGKVFGKFR*RTPTDPSQALC
Trigger: ACACAGAGCCTGGGATGGATCTGTGGGAGTTCTGCAGCGAAACTTTCCAAAGACCTTACCAGTATTTAAGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS GCA 72 bp GTTTTGATAGGTCAGAGTCAACACATCCAGCATCCATaGTGGCCTCCTTTTAGTAAACCTTCCTGTGCTCCA +
Preference number: 6 (lower is better)
Translates to: VLIGQSQHIQHP*WPPFSKPSCAP
Trigger: TGGAGCACAGGAAGGTTTACTAAAAGGAGGCCAGCATGGATGCTGGATGTGTTGACTCTGACCTATCAAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559603.1
CDS GCA 72 bp CCCCGTGCACAGGATCAGGTTTATCGGGATCACCTGTaGCATTTTGTTCTTGATGTCCATAAAGAGATGTTC +
Preference number: 6 (lower is better)
Translates to: PRAQDQVYRDHL*HFVLDVHKEMF
Trigger: GAACATCTCTTTATGGACATCAAGAACAAAATGGCACAGGTGATCCCGATAAACCTGATCCTGTGCACGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000560083.1
ENST00000573919.1
CDS CCA 72 bp TCTCGGAGCCACCTTTTCGTAGCAGCAAGGGTCCCTTaGAAGACTGTTTGGACTGAATTATTTCCAGTTTCA +
Preference number: 6 (lower is better)
Translates to: SRSHLFVAARVP*KTVWTELFPVS
Trigger: TGAAACTGGAAATAATTCAGTCCAAACAGTCTTCCAAGGGACCCTTGCTGCTACGAAAAGGTGGCTCCGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319921.4
ENST00000508628.6
ENST00000559070.5
ENST00000582970.5
CDS CCA 72 bp TTGATAGGTCAGAGTCAACACATCCAGCATCCATGCTaGCCTCCTTTTAGTAAACCTTCCTGTGCTCCAAAG +
Preference number: 6 (lower is better)
Translates to: LIGQSQHIQHPC*PPFSKPSCAPK
Trigger: CTTTGGAGCACAGGAAGGTTTACTAAAAGGAGGCCAGCATGGATGCTGGATGTGTTGACTCTGACCTATCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559603.1
CDS CAA 72 bp CACGTGAATCGTCTGATCACCCATTTGCAGGATGTCTaGAGTATACACATTCAGCTGCATGTTTGGATCCCC +
Preference number: 6 (lower is better)
Translates to: HVNRLITHLQDV*SIHIQLHVWIP
Trigger: GGGGATCCAAACATGCAGCTGAATGTGTATACTCAAGACATCCTGCAAATGGGTGATCAGACGATTCACGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000411702.7
ENST00000427003.7
ENST00000508628.6
ENST00000560083.1
ENST00000573919.1
ENST00000582970.5
CDS CAA 72 bp TTCGTCAACACAGAGTCGGCAACAGCTATCAGCCTCTaGGCATCCTCTGTGACATTTGCTAGTATTTTCTCG +
Preference number: 6 (lower is better)
Translates to: FVNTESATAISL*ASSVTFASIFS
Trigger: CGAGAAAATACTAGCAAATGTCACAGAGGATGCCAAGAGGCTGATAGCTGTTGCCGACTCTGTGTTGACGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000508628.6
ENST00000559070.5
ENST00000582970.5
CDS CAA 72 bp CTCGGCTCTCATCCACCTGAGGGTCGATCAGTCGAATaGTTTTCAGAGGCACATTTTTCACGTTTAACTGCA +
Preference number: 6 (lower is better)
Translates to: LGSHPPEGRSVE*FSEAHFSRLTA
Trigger: TGCAGTTAAACGTGAAAAATGTGCCTCTGAAAACAATTCGACTGATCGACCCTCAGGTGGATGAGAGCCGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS CAA 72 bp CTTGCCATAAAGATCATGAAGGTCACCACGAACTTCTaGAAGCCCCTCAGTGTGTCGCCAATAAAACTCGGA +
Preference number: 6 (lower is better)
Translates to: LAIKIMKVTTNF*KPLSVSPIKLG
Trigger: TCCGAGTTTTATTGGCGACACACTGAGGGGCTTCAAGAAGTTCGTGGTGACCTTCATGATCTTTATGGCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS CAA 72 bp TTCTCCAGCCGGTTAATGAGGGGGATGGGAAAGTGTTaGTACACGACGTCTTTCTCTTCAATGACAATCAGG +
Preference number: 6 (lower is better)
Translates to: FSSRLMRGMGKC*YTTSFSSMTIR
Trigger: CCTGATTGTCATTGAAGAGAAAGACGTCGTGTACAAACACTTTCCCATCCCCCTCATTAACCGGCTGGAGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS CAA 90 bp TGGGAACTGAGATGCCATTTCAGGAAGAATTTCACTTTCTTTAGTTaGCATGTAACTTACGAGAGTGTCTCTCAGGCTCCACTGAGGGCG +
Preference number: 6 (lower is better)
Translates to: WELRCHFRKNFTFFS*HVTYESVSQAPLRA
Trigger: CGCCCTCAGTGGAGCCTGAGAGACACTCTCGTAAGTTACATGCAAACTAAAGAAAGTGAAATTCTTCCTGAAATGGCATCTCAGTTCCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000411702.7
ENST00000427003.7
ENST00000508628.6
ENST00000560083.1
ENST00000582970.5
CDS CAA 90 bp ACTTCCGTGTTGTTACGATCCTTCTTGCCAGACATCAGCATCAACTaGTTCAAAAGCTCCTTCACCTCCTCTAAAGAGTACTCTCGTGAC +
Preference number: 6 (lower is better)
Translates to: TSVLLRSFLPDISIN*FKSSFTSSKEYSRD
Trigger: GTCACGAGAGTACTCTTTAGAGGAGGTGAAGGAGCTTTTGAACAAGTTGATGCTGATGTCTGGCAAGAAGGATCGTAACAACACGGAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000508628.6
ENST00000571908.1
ENST00000582970.5
CDS CAA 90 bp CTACCACACAGGTGTGCCACCATTTCCACAGTCACTGCCCTAACGTaGCTAAGCAATGCTCTATTCAACAAAATCTGCATTAGAGACAGA +
Preference number: 6 (lower is better)
Translates to: LPHRCATISTVTALT*LSNALFNKICIRDR
Trigger: TCTGTCTCTAATGCAGATTTTGTTGAATAGAGCATTGCTTAGCAACGTTAGGGCAGTGACTGTGGAAATGGTGGCACACCTGTGTGGTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559070.5
CDS TCA 72 bp AGGTGCTCAATGAAGTTTTCCATATACATAACCAGGTaGCTCAGAGGTAGCAGACTAAACCAGGACCGGAAG +
Preference number: 6 (lower is better)
Translates to: RCSMKFSIYITR*LRGSRLNQDRK
Trigger: CTTCCGGTCCTGGTTTAGTCTGCTACCTCTGAGTCACCTGGTTATGTATATGGAAAACTTCATTGAGCACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319921.4
ENST00000508628.6
ENST00000559070.5
ENST00000582970.5
CDS TCA 72 bp GTCCTGGTGGTCCACGGTGCACATGATCTTAAGTTCTaGATCCAGGTCCGTGTATTTATTCACAAAGTCCTT +
Preference number: 6 (lower is better)
Translates to: VLVVHGAHDLKF*IQVRVFIHKVL
Trigger: AAGGACTTTGTGAATAAATACACGGACCTGGATTCAGAACTTAAGATCATGTGCACCGTGGACCACCAGGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000508628.6
ENST00000559070.5
ENST00000582970.5
CDS GCA 72 bp ATGGAGCTGTATTCAACTTGCTGGACGTTCTGGAACTaGTTCACTAGATCCCTTTGCAAGGCCAAAATCTCA +
Preference number: 6 (lower is better)
Translates to: MELYSTCWTFWN*FTRSLCKAKIS
Trigger: TGAGATTTTGGCCTTGCAAAGGGATCTAGTGAAGCAGTTCCAGAACGTCCAGCAAGTTGAATACAGCTCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000411702.7
ENST00000427003.7
ENST00000508628.6
ENST00000570776.1
ENST00000582970.5
CDS CCA 72 bp CAGACTTATGAGCAGACAGGAACTGCCAGAGGGCAATaGTGTGTTTTAACTGGCATCTGTTTAAGGCCTTTA +
Preference number: 6 (lower is better)
Translates to: QTYEQTGTARGQ*CVLTGICLRPL
Trigger: TAAAGGCCTTAAACAGATGCCAGTTAAAACACACCATTGCCCTCTGGCAGTTCCTGTCTGCTCATAAGTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000411702.7
ENST00000427003.7
ENST00000508628.6
ENST00000560083.1
ENST00000582970.5
CDS CAA 72 bp GAAAACCTCTCCACTTCCGTGTTGTTACGATCCTTCTaGCCAGACATCAGCATCAACTTGTTCAAAAGCTCC +
Preference number: 6 (lower is better)
Translates to: ENLSTSVLLRSF*PDISINLFKSS
Trigger: GGAGCTTTTGAACAAGTTGATGCTGATGTCTGGCAAGAAGGATCGTAACAACACGGAAGTGGAGAGGTTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000508628.6
ENST00000571908.1
ENST00000582970.5
CDS CAA 90 bp TTCAGTATCACTGAGCGGATGACAGGAGTCTTATCCACAACATCATaGAATGGAGAGAGAGATTTTGTGTGTTCACAGTGTCTCTGGGCA +
Preference number: 6 (lower is better)
Translates to: FSITERMTGVLSTTS*NGERDFVCSQCLWA
Trigger: TGCCCAGAGACACTGTGAACACACAAAATCTCTCTCTCCATTCAATGATGTTGTGGATAAGACTCCTGTCATCCGCTCAGTGATACTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000508628.6
ENST00000558116.5
ENST00000582970.5
CDS CAA 90 bp CACAAGATGTCAATCTGCTTTTACTCTACAAGAAAACTTGCTGATTaGCTGTCTTGCTTGCTCTCTGTAAGGGAGGCCGCAGAAACTGTG +
Preference number: 6 (lower is better)
Translates to: HKMSICFYSTRKLAD*LSCLLSVREAAETV
Trigger: CACAGTTTCTGCGGCCTCCCTTACAGAGAGCAAGCAAGACAGCAAATCAGCAAGTTTTCTTGTAGAGTAAAAGCAGATTGACATCTTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000560083.1
ENST00000573919.1
CDS TCA 72 bp TCTATGCTCAGCAAATGCTGCTTCTCTCTCATAAACTaGAGTAGGGAACTCGTATCTAGCATTTGTTCCCGG +
Preference number: 6 (lower is better)
Translates to: SMLSKCCFSLIN*SRELVSSICSR
Trigger: CCGGGAACAAATGCTAGATACGAGTTCCCTACTTCAGTTTATGAGAGAGAAGCAGCATTTGCTGAGCATAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319921.4
ENST00000508628.6
ENST00000559070.5
ENST00000582970.5
CDS TCA 72 bp ACATTTAATAAATCAGCACACAACTGTGATGGTGATTaGTCCTTTGACACGCACGCTCTGTGTGGACGACAC +
Preference number: 6 (lower is better)
Translates to: TFNKSAHNCDGD*SFDTHALCGRH
Trigger: GTGTCGTCCACACAGAGCGTGCGTGTCAAAGGATCAATCACCATCACAGTTGTGTGCTGATTTATTAAATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411702.7
ENST00000558116.5
CDS TCA 72 bp GTCTCACTGTCACGGTGTCATTTAATCTTTTACTGCTaGGGTCTTGTGAGTGTCTTACTGCAAGCACTCCAA +
Preference number: 6 (lower is better)
Translates to: VSLSRCHLIFYC*GLVSVLLQALQ
Trigger: TTGGAGTGCTTGCAGTAAGACACTCACAAGACCTCAGCAGTAAAAGATTAAATGACACCGTGACAGTGAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000508628.6
ENST00000559070.5
ENST00000582970.5
CDS TCA 72 bp ATTCCTCCTCCGTTGACACACGCATGGTCAAGAGAATaGAATCCTTCAAGTAACACTGAAGAAGTTCCTGCT +
Preference number: 6 (lower is better)
Translates to: IPPPLTHAWSRE*NPSSNTEEVPA
Trigger: AGCAGGAACTTCTTCAGTGTTACTTGAAGGATTTCATTCTCTTGACCATGCGTGTGTCAACGGAGGAGGAAT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000508628.6
ENST00000558116.5
ENST00000582970.5
CDS TCA 72 bp TTAACATCTCTGAATTCAGCTAAGGTATGTGCCTTGTaGAGAAATCTCCCACTTGGAACACAGCCCCAGAAG +
Preference number: 6 (lower is better)
Translates to: LTSLNSAKVCAL*RNLPLGTQPQK
Trigger: CTTCTGGGGCTGTGTTCCAAGTGGGAGATTTCTTCACAAGGCACATACCTTAGCTGAATTCAGAGATGTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558488.1
CDS GCA 72 bp TGTATTTATCTAGGTGCTTCTTGGAAATGCAGACAATaGCTTCAACAAGAACGCGGTCATGACCCAAGTCTC +
Preference number: 6 (lower is better)
Translates to: CIYLGASWKCRQ*LQQERGHDPSL
Trigger: GAGACTTGGGTCATGACCGCGTTCTTGTTGAAGGCATTGTCTGCATTTCCAAGAAGCACCTAGATAAATACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319921.4
ENST00000508628.6
ENST00000559070.5
ENST00000573548.1
ENST00000582970.5
CDS GCA 72 bp AGTATTTTCTCGTCGGTTCCACACAATCTGAAGACGTaGTTGACATCTGCCAACGTGAGCAGATGCTTTAAA +
Preference number: 6 (lower is better)
Translates to: SIFSSVPHNLKT*LTSANVSRCFK
Trigger: TTTAAAGCATCTGCTCACGTTGGCAGATGTCAAGCACGTCTTCAGATTGTGTGGAACCGACGAGAAAATACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000508628.6
ENST00000559070.5
ENST00000582970.5
CDS CCA 72 bp TCCTCTGATGAAGACTTTATGGAGGTCAGGATTGAATaGGAAATGAAGAGAGATGATGGCGTGGAAGAACAC +
Preference number: 6 (lower is better)
Translates to: SSDEDFMEVRIE*EMKRDDGVEEH
Trigger: GTGTTCTTCCACGCCATCATCTCTCTTCATTTCCCATTCAATCCTGACCTCCATAAAGTCTTCATCAGAGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319921.4
ENST00000508628.6
ENST00000559070.5
ENST00000573548.1
ENST00000582970.5
CDS CCA 72 bp CTTTTCGTAGCAGCAAGGGTCCCTTGGAAGACTGTTTaGACTGAATTATTTCCAGTTTCATCTCTCTGTCCT +
Preference number: 6 (lower is better)
Translates to: LFVAARVPWKTV*TELFPVSSLCP
Trigger: AGGACAGAGAGATGAAACTGGAAATAATTCAGTCCAAACAGTCTTCCAAGGGACCCTTGCTGCTACGAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319921.4
ENST00000508628.6
ENST00000559070.5
ENST00000582970.5
CDS CAA 72 bp GTTGCAAAACGGCTGATATCAGGAGGTGAAAGGATCTaGCATTCGCCAATGAATTTGCTCACAGCTTCACAT +
Preference number: 6 (lower is better)
Translates to: VAKRLISGGERI*HSPMNLLTASH
Trigger: ATGTGAAGCTGTGAGCAAATTCATTGGCGAATGCAAGATCCTTTCACCTCCTGATATCAGCCGTTTTGCAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000411702.7
ENST00000508628.6
ENST00000558116.5
ENST00000559864.1
ENST00000582970.5
CDS CAA 72 bp ATTTTCTCGTCGGTTCCACACAATCTGAAGACGTGCTaGACATCTGCCAACGTGAGCAGATGCTTTAAAATG +
Preference number: 6 (lower is better)
Translates to: IFSSVPHNLKTC*TSANVSRCFKM
Trigger: CATTTTAAAGCATCTGCTCACGTTGGCAGATGTCAAGCACGTCTTCAGATTGTGTGGAACCGACGAGAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000508628.6
ENST00000559070.5
ENST00000582970.5
CDS CCA 72 bp GACCTTCCTCTTCTAGGTGGTTCAGTTCATCATTTCTaGAGTAAGCACTGGTCTTCTCAAGTATTGAATCCT +
Preference number: 6 (lower is better)
Translates to: DLPLLGGSVHHF*SKHWSSQVLNP
Trigger: AGGATTCAATACTTGAGAAGACCAGTGCTTACTCCAGAAATGATGAACTGAACCACCTAGAAGAGGAAGGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411702.7
ENST00000508628.6
ENST00000558116.5
ENST00000582970.5
CDS CAA 72 bp TCTGAATCCAGGTCCGTGTATTTATTCACAAAGTCCTaGAAGATGACATCAATCTCTGCAAGGGTGACCTCT +
Preference number: 6 (lower is better)
Translates to: SESRSVYLFTKS*KMTSISARVTS
Trigger: AGAGGTCACCCTTGCAGAGATTGATGTCATCTTCAAGGACTTTGTGAATAAATACACGGACCTGGATTCAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000508628.6
ENST00000559070.5
ENST00000582970.5
CDS CAA 72 bp ACTGAGCGGATGACAGGAGTCTTATCCACAACATCATaGAATGGAGAGAGAGATTTTGTGTGTTCACAGTGT +
Preference number: 6 (lower is better)
Translates to: TERMTGVLSTTS*NGERDFVCSQC
Trigger: ACACTGTGAACACACAAAATCTCTCTCTCCATTCAATGATGTTGTGGATAAGACTCCTGTCATCCGCTCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000508628.6
ENST00000558116.5
ENST00000582970.5
CDS CAA 72 bp TGTCATTTCATCAGTGTGACTCTGGGTGTGCTCACTTaGCTGAAATCCCACCAGAATAAGAGGCTTAAAATA +
Preference number: 6 (lower is better)
Translates to: CHFISVTLGVLT*LKSHQNKRLKI
Trigger: TATTTTAAGCCTCTTATTCTGGTGGGATTTCAGCAAAGTGAGCACACCCAGAGTCACACTGATGAAATGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411702.7
CDS CAA 72 bp AAGTCGTCGAAGTTATCAGTAAAATTTAGTAAAGTGTaGAGAACACTGAAGTCACCGTTCAGTCCCAGGCTC +
Preference number: 6 (lower is better)
Translates to: KSSKLSVKFSKV*RTLKSPFSPRL
Trigger: GAGCCTGGGACTGAACGGTGACTTCAGTGTTCTCAACACTTTACTAAATTTTACTGATAACTTCGACGACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000508628.6
ENST00000559070.5
ENST00000582970.5
CDS CAA 72 bp AGAGGCACATTTTTCACGTTTAACTGCATCTTCATTTaGTCGTGCAACCTCTTCACGTACAGAGACTTTCCA +
Preference number: 6 (lower is better)
Translates to: RGTFFTFNCIFI*SCNLFTYRDFP
Trigger: TGGAAAGTCTCTGTACGTGAAGAGGTTGCACGACAAAATGAAGATGCAGTTAAACGTGAAAAATGTGCCTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS CAA 90 bp TGCCAGTTTCAGGCAAAGAAGTACCTGAGGTGGGAGCAGATTTTCTaGTCATGGGGCAGGACTTCTTCTTGCTATTATTGTTATTATTTT +
Preference number: 6 (lower is better)
Translates to: CQFQAKKYLRWEQIF*SWGRTSSCYYCYYF
Trigger: AAAATAATAACAATAATAGCAAGAAGAAGTCCTGCCCCATGACAAGAAAATCTGCTCCCACCTCAGGTACTTCTTTGCCTGAAACTGGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000411702.7
CDS CAA 90 bp CCAGGATTCTGTCATTTCATCAGTGTGACTCTGGGTGTGCTCACTTaGCTGAAATCCCACCAGAATAAGAGGCTTAAAATAAAATCAGAT +
Preference number: 6 (lower is better)
Translates to: PGFCHFISVTLGVLT*LKSHQNKRLKIKSD
Trigger: ATCTGATTTTATTTTAAGCCTCTTATTCTGGTGGGATTTCAGCAAAGTGAGCACACCCAGAGTCACACTGATGAAATGACAGAATCCTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000411702.7
CDS CAA 90 bp ATCTTAAGTTCTGAATCCAGGTCCGTGTATTTATTCACAAAGTCCTaGAAGATGACATCAATCTCTGCAAGGGTGACCTCTCCTGACTTT +
Preference number: 6 (lower is better)
Translates to: ILSSESRSVYLFTKS*KMTSISARVTSPDF
Trigger: AAAGTCAGGAGAGGTCACCCTTGCAGAGATTGATGTCATCTTCAAGGACTTTGTGAATAAATACACGGACCTGGATTCAGAACTTAAGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000508628.6
ENST00000559070.5
ENST00000582970.5
CDS CAA 90 bp ATTGTTTTCAGAGGCACATTTTTCACGTTTAACTGCATCTTCATTTaGTCGTGCAACCTCTTCACGTACAGAGACTTTCCAACACCTGCT +
Preference number: 6 (lower is better)
Translates to: IVFRGTFFTFNCIFI*SCNLFTYRDFPTPA
Trigger: AGCAGGTGTTGGAAAGTCTCTGTACGTGAAGAGGTTGCACGACAAAATGAAGATGCAGTTAAACGTGAAAAATGTGCCTCTGAAAACAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS GCA 72 bp ACATTTTTCACGTTTAACTGCATCTTCATTTTGTCGTaGAACCTCTTCACGTACAGAGACTTTCCAACACCT +
Preference number: 6 (lower is better)
Translates to: TFFTFNCIFILS*NLFTYRDFPTP
Trigger: AGGTGTTGGAAAGTCTCTGTACGTGAAGAGGTTGCACGACAAAATGAAGATGCAGTTAAACGTGAAAAATGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000508628.6
ENST00000582970.5
CDS CCA 72 bp AAGAAGTACCTGAGGTGGGAGCAGATTTTCTTGTCATaGGGCAGGACTTCTTCTTGCTATTATTGTTATTAT +
Preference number: 6 (lower is better)
Translates to: KKYLRWEQIFLS*GRTSSCYYCYY
Trigger: ATAATAACAATAATAGCAAGAAGAAGTCCTGCCCCATGACAAGAAAATCTGCTCCCACCTCAGGTACTTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411702.7
CDS CCA 72 bp TTAAAAGCCCTGAGGTGGGAGCAGATTTTCTTGTCATaGGGCAGGACTTCTTCTTGCTATTATTGTTATTAT +
Preference number: 6 (lower is better)
Translates to: LKALRWEQIFLS*GRTSSCYYCYY
Trigger: ATAATAACAATAATAGCAAGAAGAAGTCCTGCCCCATGACAAGAAAATCTGCTCCCACCTCAGGGCTTTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427003.7