Pregenerated sensors for RNF212B (Homo sapiens)
Ensembl gene IDs: ENSG00000215277Ensembl transcript IDs: ENST00000399905.5, ENST00000399910.5, ENST00000430154.6, ENST00000463881.1, ENST00000470456.1, ENST00000470818.5, ENST00000492355.5, ENST00000492621.5, ENST00000498441.1
Found 100 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AAGAGATATAAACATCTTCCTGAAGCACTAGCCTTTTGTAAGACCTaGCCACTGTCCTGGGAGGTGATAAGGGTGAATAGGGTAAAGATG | + |
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Preference number: 1 (lower is better) Translates to: KRYKHLPEALAFCKT*PLSWEVIRVNRVKM Trigger: CATCTTTACCCTATTCACCCTTATCACCTCCCAGGACAGTGGTCAGGTCTTACAAAAGGCTAGTGCTTCAGGAAGATGTTTATATCTCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000399905.5 ENST00000399910.5 |
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| 3UTR CAA 90 bp | CTGGAAGCTACAGTCCATCCTTCAGCAGCATGTATAGATCAGATCTaGAAGATGATCTATCTAGAAGTGGTCCATGCTTCTCTCCCACTG | + |
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Preference number: 2 (lower is better) Translates to: LEATVHPSAACIDQI*KMIYLEVVHASLPL Trigger: CAGTGGGAGAGAAGCATGGACCACTTCTAGATAGATCATCTTCAAGATCTGATCTATACATGCTGCTGAAGGATGGACTGTAGCTTCCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000399905.5 |
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| 3UTR-3UTR TCA 90 bp | AGGAAAAGAACAGAGATATTGCTCGTTAACATTGGCAATGGGACAGTATATCCACCAAATTGTAGGAAATaGGGGGAGCTACCAGTGTCT | + |
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Preference number: 2 (lower is better) Translates to: RKRTEILLVNIGNGTVYPPNCRK*GELPVS Trigger: AGACACTGGTAGCTCCCCTCATTTCCTACAATTTGG...TGGATATACTGTCCCATTGCCAATGTTAACGAGCAATATCTCTGTTCTTTTCCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000399905.5 ENST00000399910.5 |
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| 3UTR-3UTR CCA 90 bp | ACAGAGATATTGCTCGTTAACATTGGCAATGGGACAGTATATCCAAAGCTAAAAATGCTTCTCTCCCACTaGGTAATCCCATATGCCTCC | + |
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Preference number: 2 (lower is better) Translates to: TEILLVNIGNGTVYPKLKMLLSH*VIPYAS Trigger: GGAGGCATATGGGATTACCCAGTGGGAGAGAAGCAT...TTTTAGCTTTGGATATACTGTCCCATTGCCAATGTTAACGAGCAATATCTCTGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000399905.5 |
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| 3UTR-3UTR TCA 90 bp | GAGATATTGCTCGTTAACATTGGCAATGGGACAGTATATCCAAAGCTAAAAATGCCAAATTGTAGGAAATaGGGGGAGCTACCAGTGTCT | + |
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Preference number: 2 (lower is better) Translates to: EILLVNIGNGTVYPKLKMPNCRK*GELPVS Trigger: AGACACTGGTAGCTCCCCTCATTTCCTACAATTTGG...CATTTTTAGCTTTGGATATACTGTCCCATTGCCAATGTTAACGAGCAATATCTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000399905.5 ENST00000399910.5 |
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| 3UTR-3UTR TCA 90 bp | ACAGAGATATTGCTCGTTAACATTGGCAATGGGACAGTATATCCAAAGCTAAAAACAGTGATGAGTATATaGTCCATCACAATCCCCATT | + |
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Preference number: 2 (lower is better) Translates to: TEILLVNIGNGTVYPKLKTVMSI*SITIPI Trigger: AATGGGGATTGTGATGGATCATATACTCATCACTGT...TTTTAGCTTTGGATATACTGTCCCATTGCCAATGTTAACGAGCAATATCTCTGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000399905.5 ENST00000399910.5 |
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| 3UTR-3UTR CAA 90 bp | AAGGTACAGAGTGAAACTAGGAAACAATGCAGGGATACATTTTCCAGGGCCATCTCCCATATGCCTCCGTaGTTGGTAGAGAGTCTGCAG | + |
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Preference number: 3 (lower is better) Translates to: KVQSETRKQCRDTFSRAISHMPP*LVESLQ Trigger: CTGCAGACTCTCTACCAACAACGGAGGCATATGGGA...GATGGCCCTGGAAAATGTATCCCTGCATTGTTTCCTAGTTTCACTCTGTACCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000399905.5 |
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| 3UTR-3UTR CAA 90 bp | GGAAAAGAACAGAGATATTGCTCGTTAACATTGGCAATGGGACAGTATATCCAACATATGCCTCCGTTGTaGGTAGAGAGTCTGCAGGAC | + |
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Preference number: 3 (lower is better) Translates to: GKEQRYCSLTLAMGQYIQHMPPL*VESLQD Trigger: GTCCTGCAGACTCTCTACCAACAACGGAGGCATATG...TTGGATATACTGTCCCATTGCCAATGTTAACGAGCAATATCTCTGTTCTTTTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000399905.5 |
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| CDS-3UTR GCA 90 bp | TTTCCAGGGCCATCACCCCTAATGCGTACTGGAAGCTACAGTCCATCCTTCAGCGTCCTGGCTCACCAGTaGTTGCTGTGCCTCCTGCAT | + |
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Preference number: 4 (lower is better) Translates to: FPGPSPLMRTGSYSPSFSVLAHQ*LLCLLH Trigger: ATGCAGGAGGCACAGCAAGCACTGGTGAGCCAGGAC...GCTGAAGGATGGACTGTAGCTTCCAGTACGCATTAGGGGTGATGGCCCTGGAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000399905.5 ENST00000399910.5 |
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| CDS-3UTR TCA 90 bp | GGGATACATTTTCCAGGGCCATCACCCCTAATGCGTACTGGAAGCTACAGTCCATGGTCGAGGTGTGATTaGCCTGCTTCCTTGGTACCG | + |
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Preference number: 4 (lower is better) Translates to: GIHFPGPSPLMRTGSYSPWSRCD*PASLVP Trigger: CGGTACCAAGGAAGCAGGTCAATCACACCTCGACCA...TGGACTGTAGCTTCCAGTACGCATTAGGGGTGATGGCCCTGGAAAATGTATCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000399910.5 |
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| CDS-3UTR TCA 90 bp | GGGATACATTTTCCAGGGCCATCACCCCTAATGCGTACTGGAAGCTACAGTCCAGTTGTGCTCTCCCTCTaGGCAAAATTGTTGGGGGTG | + |
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Preference number: 4 (lower is better) Translates to: GIHFPGPSPLMRTGSYSPVVLSL*AKLLGV Trigger: CACCCCCAACAATTTTGCTCAGAGGGAGAGCACAAC...TGGACTGTAGCTTCCAGTACGCATTAGGGGTGATGGCCCTGGAAAATGTATCCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENST00000399905.5 ENST00000399910.5 |
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| CDS-3UTR TCA 90 bp | GAAACTAGGAAACAATGCAGGGATACATTTTCCAGGGCCATCACCCCTAATGCGAGGAATAGATTCCGCTaGGGAGGACCGACTGACCAC | + |
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Preference number: 4 (lower is better) Translates to: ETRKQCRDTFSRAITPNARNRFR*GGPTDH Trigger: GTGGTCAGTCGGTCCTCCTCAGCGGAATCTATTCCT...CGCATTAGGGGTGATGGCCCTGGAAAATGTATCCCTGCATTGTTTCCTAGTTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000399910.5 |
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| CDS-3UTR TCA 90 bp | AGGAAACAATGCAGGGATACATTTTCCAGGGCCATCACCCCTAATGCGTACTGGGTTGTGCTCTCCCTCTaGGCAAAATTGTTGGGGGTG | + |
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Preference number: 4 (lower is better) Translates to: RKQCRDTFSRAITPNAYWVVLSL*AKLLGV Trigger: CACCCCCAACAATTTTGCTCAGAGGGAGAGCACAAC...CCAGTACGCATTAGGGGTGATGGCCCTGGAAAATGTATCCCTGCATTGTTTCCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENST00000399905.5 ENST00000399910.5 |
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| CDS-3UTR GCA 90 bp | CAGAGTGAAACTAGGAAACAATGCAGGGATACATTTTCCAGGGCCATCACCCCTCACCAGTGCTTGCTGTaGCTCCTGCATGGCTGTTTC | + |
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Preference number: 4 (lower is better) Translates to: QSETRKQCRDTFSRAITPHQCLL*LLHGCF Trigger: GAAACAGCCATGCAGGAGGCACAGCAAGCACTGGTG...AGGGGTGATGGCCCTGGAAAATGTATCCCTGCATTGTTTCCTAGTTTCACTCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000399905.5 ENST00000399910.5 |
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| CDS-3UTR GCA 90 bp | GAAACTAGGAAACAATGCAGGGATACATTTTCCAGGGCCATCACCCCTAATGCGCACCAGTGCTTGCTGTaGCTCCTGCATGGCTGTTTC | + |
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Preference number: 4 (lower is better) Translates to: ETRKQCRDTFSRAITPNAHQCLL*LLHGCF Trigger: GAAACAGCCATGCAGGAGGCACAGCAAGCACTGGTG...CGCATTAGGGGTGATGGCCCTGGAAAATGTATCCCTGCATTGTTTCCTAGTTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000399905.5 ENST00000399910.5 |
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| CDS-3UTR TCA 90 bp | AGGTACAGAGTGAAACTAGGAAACAATGCAGGGATACATTTTCCAGGGCCATCAGACTCTTGTGTGGCCTaGATGCCCATTTGGGGATGG | + |
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Preference number: 4 (lower is better) Translates to: RYRVKLGNNAGIHFPGPSDSCVA*MPIWGW Trigger: CCATCCCCAAATGGGCATTCAGGCCACACAAGAGTC...TGATGGCCCTGGAAAATGTATCCCTGCATTGTTTCCTAGTTTCACTCTGTACCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000399905.5 ENST00000399910.5 |
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| CDS-3UTR TCA 90 bp | GATACATTTTCCAGGGCCATCACCCCTAATGCGTACTGGAAGCTACAGTCCATCCCAAATTGTAGGAAATaGGGGGAGCTACCAGTGTCT | + |
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Preference number: 4 (lower is better) Translates to: DTFSRAITPNAYWKLQSIPNCRK*GELPVS Trigger: AGACACTGGTAGCTCCCCTCATTTCCTACAATTTGG...GATGGACTGTAGCTTCCAGTACGCATTAGGGGTGATGGCCCTGGAAAATGTATC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000399905.5 ENST00000399910.5 |
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| CDS-3UTR GCA 90 bp | AGCATAAGGTACAGAGTGAAACTAGGAAACAATGCAGGGATACATTTTCCAGGGTGGCTCACCAGTGCTTaGTGTGCCTCCTGCATGGCT | + |
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Preference number: 4 (lower is better) Translates to: SIRYRVKLGNNAGIHFPGWLTSA*CASCMA Trigger: AGCCATGCAGGAGGCACAGCAAGCACTGGTGAGCCA...CCCTGGAAAATGTATCCCTGCATTGTTTCCTAGTTTCACTCTGTACCTTATGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000399905.5 ENST00000399910.5 |
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| CDS-3UTR TCA 90 bp | TTTCCAGGGCCATCACCCCTAATGCGTACTGGAAGCTACAGTCCATCCTTCAGCGCTTATAAAAGGCGATaGGGAGATCTGTTTGTTTCT | + |
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Preference number: 4 (lower is better) Translates to: FPGPSPLMRTGSYSPSFSAYKRR*GDLFVS Trigger: AGAAACAAACAGATCTCCTCATCGCCTTTTATAAGC...GCTGAAGGATGGACTGTAGCTTCCAGTACGCATTAGGGGTGATGGCCCTGGAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000399905.5 ENST00000399910.5 |
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| CDS-3UTR TCA 90 bp | AAGGTACAGAGTGAAACTAGGAAACAATGCAGGGATACATTTTCCAGGGCCATCGACCGACTGACCACTTaGCTGCTATGCTGGAAACTG | + |
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Preference number: 4 (lower is better) Translates to: KVQSETRKQCRDTFSRAIDRLTT*LLCWKL Trigger: CAGTTTCCAGCATAGCAGTCAAGTGGTCAGTCGGTC...GATGGCCCTGGAAAATGTATCCCTGCATTGTTTCCTAGTTTCACTCTGTACCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000399910.5 |
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| CDS-3UTR GCA 90 bp | GAAACTAGGAAACAATGCAGGGATACATTTTCCAGGGCCATCACCCCTAATGCGGCTTGCTGTGCCTCCTaGATGGCTGTTTCTAACTTT | + |
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Preference number: 4 (lower is better) Translates to: ETRKQCRDTFSRAITPNAACCAS*MAVSNF Trigger: AAAGTTAGAAACAGCCATGCAGGAGGCACAGCAAGC...CGCATTAGGGGTGATGGCCCTGGAAAATGTATCCCTGCATTGTTTCCTAGTTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000399905.5 ENST00000399910.5 |
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| CDS-3UTR CCA 90 bp | AGATCAGATCTTGAAGATGATCTATCTAGAAGTGGTCCATGCTTCTCTCCCACTGAGGACCGATTGTCCTaGCTCACCAGTGCTTGCTGT | + |
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Preference number: 4 (lower is better) Translates to: RSDLEDDLSRSGPCFSPTEDRLS*LTSACC Trigger: ACAGCAAGCACTGGTGAGCCAGGACAATCGGTCCTC...AGTGGGAGAGAAGCATGGACCACTTCTAGATAGATCATCTTCAAGATCTGATCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000399905.5 |
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| CDS-3UTR TCA 90 bp | AGATCAGATCTTGAAGATGATCTATCTAGAAGTGGTCCATGCTTCTCTCCCACTAGGAATAGATTCCGCTaGGGAGGACCGATTGTCCTG | + |
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Preference number: 4 (lower is better) Translates to: RSDLEDDLSRSGPCFSPTRNRFR*GGPIVL Trigger: CAGGACAATCGGTCCTCCTCAGCGGAATCTATTCCT...AGTGGGAGAGAAGCATGGACCACTTCTAGATAGATCATCTTCAAGATCTGATCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000399905.5 |
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| CDS-3UTR GCA 90 bp | AGGAAAAGAACAGAGATATTGCTCGTTAACATTGGCAATGGGACAGTATATCCATGGCTCACCAGTGCTTaGTGTGCCTCCTGCATGGCT | + |
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Preference number: 4 (lower is better) Translates to: RKRTEILLVNIGNGTVYPWLTSA*CASCMA Trigger: AGCCATGCAGGAGGCACAGCAAGCACTGGTGAGCCA...TGGATATACTGTCCCATTGCCAATGTTAACGAGCAATATCTCTGTTCTTTTCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000399905.5 ENST00000399910.5 |
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| CDS-3UTR GCA 90 bp | AGTGTCTTCTGGAAGAGATATAAACATCTTCCTGAAGCACTAGCCTTTTGTAAGGTCCTGGCTCACCAGTaGTTGCTGTGCCTCCTGCAT | + |
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Preference number: 4 (lower is better) Translates to: SVFWKRYKHLPEALAFCKVLAHQ*LLCLLH Trigger: ATGCAGGAGGCACAGCAAGCACTGGTGAGCCAGGAC...CTTACAAAAGGCTAGTGCTTCAGGAAGATGTTTATATCTCTTCCAGAAGACACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000399905.5 ENST00000399910.5 |
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| CDS-3UTR GCA 90 bp | GTCTTCTGGAAGAGATATAAACATCTTCCTGAAGCACTAGCCTTTTGTAAGACCTTCCCTGCAGACCTCTaGCTCCTTGTCCCAAGCTAC | + |
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Preference number: 4 (lower is better) Translates to: VFWKRYKHLPEALAFCKTFPADL*LLVPSY Trigger: GTAGCTTGGGACAAGGAGGCAGAGGTCTGCAGGGAA...GGTCTTACAAAAGGCTAGTGCTTCAGGAAGATGTTTATATCTCTTCCAGAAGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000399910.5 |
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| CDS-3UTR GCA 90 bp | GAAATGAGGGGAGCTACCAGTGTCTTCTGGAAGAGATATAAACATCTTCCTGAACTTGTGTGGCCTGAATaGCCATTTGGGGATGGTCTG | + |
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Preference number: 4 (lower is better) Translates to: EMRGATSVFWKRYKHLPELVWPE*PFGDGL Trigger: CAGACCATCCCCAAATGGGCATTCAGGCCACACAAG...TTCAGGAAGATGTTTATATCTCTTCCAGAAGACACTGGTAGCTCCCCTCATTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000399905.5 ENST00000399910.5 |
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| CDS-3UTR CCA 90 bp | GGAGCTACCAGTGTCTTCTGGAAGAGATATAAACATCTTCCTGAAGCACTAGCCGACAATTCTTTGTCCTaGCTCACCAGTGCTTGCTGT | + |
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Preference number: 4 (lower is better) Translates to: GATSVFWKRYKHLPEALADNSLS*LTSACC Trigger: ACAGCAAGCACTGGTGAGCCAGGACAAAGAATTGTC...GGCTAGTGCTTCAGGAAGATGTTTATATCTCTTCCAGAAGACACTGGTAGCTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000399910.5 |
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| CDS-3UTR CCA 90 bp | AAGGTACAGAGTGAAACTAGGAAACAATGCAGGGATACATTTTCCAGGGCCATCATGCTTCTCTCCCACTaGGTAATCCCATATGCCTCC | + |
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Preference number: 4 (lower is better) Translates to: KVQSETRKQCRDTFSRAIMLLSH*VIPYAS Trigger: GGAGGCATATGGGATTACCCAGTGGGAGAGAAGCAT...GATGGCCCTGGAAAATGTATCCCTGCATTGTTTCCTAGTTTCACTCTGTACCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000399905.5 ENST00000399910.5 |
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| CDS-3UTR TCA 90 bp | AGGAAAAGAACAGAGATATTGCTCGTTAACATTGGCAATGGGACAGTATATCCAGACTCTTGTGTGGCCTaGATGCCCATTTGGGGATGG | + |
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Preference number: 4 (lower is better) Translates to: RKRTEILLVNIGNGTVYPDSCVA*MPIWGW Trigger: CCATCCCCAAATGGGCATTCAGGCCACACAAGAGTC...TGGATATACTGTCCCATTGCCAATGTTAACGAGCAATATCTCTGTTCTTTTCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000399905.5 ENST00000399910.5 |
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| CDS-3UTR TCA 90 bp | CCATCACCCCTAATGCGTACTGGAAGCTACAGTCCATCCTTCAGCAGCATGTATACAGTGATGAGTATATaGTCCATCACAATCCCCATT | + |
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Preference number: 4 (lower is better) Translates to: PSPLMRTGSYSPSFSSMYTVMSI*SITIPI Trigger: AATGGGGATTGTGATGGATCATATACTCATCACTGT...ATACATGCTGCTGAAGGATGGACTGTAGCTTCCAGTACGCATTAGGGGTGATGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000399905.5 ENST00000399910.5 |
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| CDS-3UTR GCA 90 bp | CAGAGTGAAACTAGGAAACAATGCAGGGATACATTTTCCAGGGCCATCACCCCTTTCGGAAGCACTGGTTaGAATGAAACCAATCCATTC | + |
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Preference number: 4 (lower is better) Translates to: QSETRKQCRDTFSRAITPFGSTG*NETNPF Trigger: GAATGGATTGGTTTCATTGCAACCAGTGCTTCCGAA...AGGGGTGATGGCCCTGGAAAATGTATCCCTGCATTGTTTCCTAGTTTCACTCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000399910.5 |
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| CDS-3UTR GCA 90 bp | ACCAGTGTCTTCTGGAAGAGATATAAACATCTTCCTGAAGCACTAGCCTTTTGTCTTGTGTGGCCTGAATaGCCATTTGGGGATGGTCTG | + |
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Preference number: 4 (lower is better) Translates to: TSVFWKRYKHLPEALAFCLVWPE*PFGDGL Trigger: CAGACCATCCCCAAATGGGCATTCAGGCCACACAAG...ACAAAAGGCTAGTGCTTCAGGAAGATGTTTATATCTCTTCCAGAAGACACTGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000399905.5 ENST00000399910.5 |
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| CDS-3UTR CCA 90 bp | AGGTACAGAGTGAAACTAGGAAACAATGCAGGGATACATTTTCCAGGGCCATCATGCAGGACTGGTAGCTaGAAACTAGGAAGACTCTCT | + |
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Preference number: 4 (lower is better) Translates to: RYRVKLGNNAGIHFPGPSCRTGS*KLGRLS Trigger: AGAGAGTCTTCCTAGTTTCCAGCTACCAGTCCTGCA...TGATGGCCCTGGAAAATGTATCCCTGCATTGTTTCCTAGTTTCACTCTGTACCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000399905.5 ENST00000399910.5 |
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| CDS-3UTR GCA 90 bp | CCATCACCCCTAATGCGTACTGGAAGCTACAGTCCATCCTTCAGCAGCATGTATCAAATTTTTCCTCAGTaGTTTCTAAGGTTGTCAGGA | + |
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Preference number: 4 (lower is better) Translates to: PSPLMRTGSYSPSFSSMYQIFPQ*FLRLSG Trigger: TCCTGACAACCTTAGAAAGCACTGAGGAAAAATTTG...ATACATGCTGCTGAAGGATGGACTGTAGCTTCCAGTACGCATTAGGGGTGATGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000399910.5 |
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| CDS-3UTR CCA 90 bp | AGGAAACAATGCAGGGATACATTTTCCAGGGCCATCACCCCTAATGCGTACTGGTTTTTACAGAAAATATaGCCACAGCTGGTGACAAAG | + |
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Preference number: 4 (lower is better) Translates to: RKQCRDTFSRAITPNAYWFLQKI*PQLVTK Trigger: CTTTGTCACCAGCTGTGGCCATATTTTCTGTAAAAA...CCAGTACGCATTAGGGGTGATGGCCCTGGAAAATGTATCCCTGCATTGTTTCCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000399910.5 |
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| CDS-3UTR CCA 90 bp | AGTGTCTTCTGGAAGAGATATAAACATCTTCCTGAAGCACTAGCCTTTTGTAAGGTGAGGACTCTTGTGTaGCCTGAATGCCCATTTGGG | + |
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Preference number: 4 (lower is better) Translates to: SVFWKRYKHLPEALAFCKVRTLV*PECPFG Trigger: CCCAAATGGGCATTCAGGCCACACAAGAGTCCTCAC...CTTACAAAAGGCTAGTGCTTCAGGAAGATGTTTATATCTCTTCCAGAAGACACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000399905.5 ENST00000399910.5 |
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| CDS-3UTR CCA 90 bp | GATACATTTTCCAGGGCCATCACCCCTAATGCGTACTGGAAGCTACAGTCCATCGCTACCAGTGTCTTCTaGAAGAGATATAAACATCTT | + |
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Preference number: 4 (lower is better) Translates to: DTFSRAITPNAYWKLQSIATSVF*KRYKHL Trigger: AAGATGTTTATATCTCTTCCAGAAGACACTGGTAGC...GATGGACTGTAGCTTCCAGTACGCATTAGGGGTGATGGCCCTGGAAAATGTATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000399905.5 ENST00000399910.5 |
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| CDS-3UTR CCA 90 bp | TGCGTACTGGAAGCTACAGTCCATCCTTCAGCAGCATGTATAGATCAGATCTTGCTTATTCCCTTATTTTaGTGGTGCACATTCTCCAAC | + |
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Preference number: 4 (lower is better) Translates to: CVLEATVHPSAACIDQILLIPLF*WCTFSN Trigger: GTTGGAGAATGTGCACCACCAAAATAAGGGAATAAG...CAAGATCTGATCTATACATGCTGCTGAAGGATGGACTGTAGCTTCCAGTACGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000399910.5 |
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| CDS-3UTR CCA 90 bp | ACCAGTGTCTTCTGGAAGAGATATAAACATCTTCCTGAAGCACTAGCCTTTTGTTGCAGGACTGGTAGCTaGAAACTAGGAAGACTCTCT | + |
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Preference number: 4 (lower is better) Translates to: TSVFWKRYKHLPEALAFCCRTGS*KLGRLS Trigger: AGAGAGTCTTCCTAGTTTCCAGCTACCAGTCCTGCA...ACAAAAGGCTAGTGCTTCAGGAAGATGTTTATATCTCTTCCAGAAGACACTGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000399905.5 ENST00000399910.5 |
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| CDS-3UTR CCA 90 bp | GGAAAAGAACAGAGATATTGCTCGTTAACATTGGCAATGGGACAGTATATCCAAATGCTTCTCTCCCACTaGGTAATCCCATATGCCTCC | + |
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Preference number: 4 (lower is better) Translates to: GKEQRYCSLTLAMGQYIQMLLSH*VIPYAS Trigger: GGAGGCATATGGGATTACCCAGTGGGAGAGAAGCAT...TTGGATATACTGTCCCATTGCCAATGTTAACGAGCAATATCTCTGTTCTTTTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000399905.5 ENST00000399910.5 |
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| CDS-3UTR TCA 90 bp | GGAGCTACCAGTGTCTTCTGGAAGAGATATAAACATCTTCCTGAAGCACTAGCCAAAAACATCTTCTCCTaGGGCTTCAGATTATCAGAA | + |
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Preference number: 4 (lower is better) Translates to: GATSVFWKRYKHLPEALAKNIFS*GFRLSE Trigger: TTCTGATAATCTGAAGCCTCAGGAGAAGATGTTTTT...GGCTAGTGCTTCAGGAAGATGTTTATATCTCTTCCAGAAGACACTGGTAGCTCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000399910.5 |
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| CDS-3UTR GCA 90 bp | AGTGTCTTCTGGAAGAGATATAAACATCTTCCTGAAGCACTAGCCTTTTGTAAGGCTTGCTGTGCCTCCTaGATGGCTGTTTCTAACTTT | + |
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Preference number: 4 (lower is better) Translates to: SVFWKRYKHLPEALAFCKACCAS*MAVSNF Trigger: AAAGTTAGAAACAGCCATGCAGGAGGCACAGCAAGC...CTTACAAAAGGCTAGTGCTTCAGGAAGATGTTTATATCTCTTCCAGAAGACACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000399905.5 ENST00000399910.5 |
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| CDS-3UTR CCA 90 bp | AAAGAACAGAGATATTGCTCGTTAACATTGGCAATGGGACAGTATATCCAAAGCCTGGTGACAAAGAAATaGGCCCCATCTTTTCGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: KEQRYCSLTLAMGQYIQSLVTKK*APSFRK Trigger: CTTCCGAAAAGATGGGGCCCATTTCTTTGTCACCAG...GCTTTGGATATACTGTCCCATTGCCAATGTTAACGAGCAATATCTCTGTTCTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000399910.5 |
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| CDS-3UTR CCA 90 bp | ATAATAAGGAAAAGAACAGAGATATTGCTCGTTAACATTGGCAATGGGACAGTAGTGAGGACTCTTGTGTaGCCTGAATGCCCATTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: IIRKRTEILLVNIGNGTVVRTLV*PECPFG Trigger: CCCAAATGGGCATTCAGGCCACACAAGAGTCCTCAC...TACTGTCCCATTGCCAATGTTAACGAGCAATATCTCTGTTCTTTTCCTTATTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000399905.5 ENST00000399910.5 |
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| 3UTR CAA 72 bp | ACAGTCCATCCTTCAGCAGCATGTATAGATCAGATCTaGAAGATGATCTATCTAGAAGTGGTCCATGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: TVHPSAACIDQI*KMIYLEVVHAS Trigger: AGAAGCATGGACCACTTCTAGATAGATCATCTTCAAGATCTGATCTATACATGCTGCTGAAGGATGGACTGT 42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000399905.5 |
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| CDS-3UTR TCA 90 bp | GTCTTCTGGAAGAGATATAAACATCTTCCTGAAGCACTAGCCTTTTGTAAGACCATCCATTCTTATTCCTaGACTCAGGGTCTTCTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: VFWKRYKHLPEALAFCKTIHSYS*TQGLLP Trigger: AGGAAGAAGACCCTGAGTTCAGGAATAAGAATGGAT...GGTCTTACAAAAGGCTAGTGCTTCAGGAAGATGTTTATATCTCTTCCAGAAGAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000399910.5 |
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| CDS-3UTR TCA 90 bp | AAGGTACAGAGTGAAACTAGGAAACAATGCAGGGATACATTTTCCAGGGCCATCAAGCACTGGTTGCAATaGAACCAATCCATTCTTATT | + |
|
Preference number: 4 (lower is better) Translates to: KVQSETRKQCRDTFSRAIKHWLQ*NQSILI Trigger: AATAAGAATGGATTGGTTTCATTGCAACCAGTGCTT...GATGGCCCTGGAAAATGTATCCCTGCATTGTTTCCTAGTTTCACTCTGTACCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000399910.5 |
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| CDS-3UTR TCA 90 bp | GTCTTCTGGAAGAGATATAAACATCTTCCTGAAGCACTAGCCTTTTGTAAGACCGCTTATAAAAGGCGATaGGGAGATCTGTTTGTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: VFWKRYKHLPEALAFCKTAYKRR*GDLFVS Trigger: AGAAACAAACAGATCTCCTCATCGCCTTTTATAAGC...GGTCTTACAAAAGGCTAGTGCTTCAGGAAGATGTTTATATCTCTTCCAGAAGAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000399905.5 ENST00000399910.5 |
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| CDS-3UTR TCA 90 bp | ATAATAAGGAAAAGAACAGAGATATTGCTCGTTAACATTGGCAATGGGACAGTACCAAATTGTAGGAAATaGGGGGAGCTACCAGTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: IIRKRTEILLVNIGNGTVPNCRK*GELPVS Trigger: AGACACTGGTAGCTCCCCTCATTTCCTACAATTTGG...TACTGTCCCATTGCCAATGTTAACGAGCAATATCTCTGTTCTTTTCCTTATTAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000399905.5 ENST00000399910.5 |
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| CDS-3UTR TCA 90 bp | GCTACAGTCCATCCTTCAGCAGCATGTATAGATCAGATCTTGAAGATGATCTATACAGTGATGAGTATATaGTCCATCACAATCCCCATT | + |
|
Preference number: 4 (lower is better) Translates to: ATVHPSAACIDQILKMIYTVMSI*SITIPI Trigger: AATGGGGATTGTGATGGATCATATACTCATCACTGT...ATAGATCATCTTCAAGATCTGATCTATACATGCTGCTGAAGGATGGACTGTAGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000399905.5 |
||
| CDS-3UTR CCA 90 bp | AAAGAACAGAGATATTGCTCGTTAACATTGGCAATGGGACAGTATATCCAAAGCATTCCCTTATTTTGGTaGTGCACATTCTCCAACAGC | + |
|
Preference number: 4 (lower is better) Translates to: KEQRYCSLTLAMGQYIQSIPLFW*CTFSNS Trigger: GCTGTTGGAGAATGTGCACCACCAAAATAAGGGAAT...GCTTTGGATATACTGTCCCATTGCCAATGTTAACGAGCAATATCTCTGTTCTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000399910.5 |
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| CDS-3UTR CCA 90 bp | AGCATAAGGTACAGAGTGAAACTAGGAAACAATGCAGGGATACATTTTCCAGGGGCTACCAGTGTCTTCTaGAAGAGATATAAACATCTT | + |
|
Preference number: 4 (lower is better) Translates to: SIRYRVKLGNNAGIHFPGATSVF*KRYKHL Trigger: AAGATGTTTATATCTCTTCCAGAAGACACTGGTAGC...CCCTGGAAAATGTATCCCTGCATTGTTTCCTAGTTTCACTCTGTACCTTATGCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000399905.5 ENST00000399910.5 |
||
| CDS-3UTR GCA 90 bp | ATAATAAGGAAAAGAACAGAGATATTGCTCGTTAACATTGGCAATGGGACAGTACCCTTATTTTGGTGGTaGACATTCTCCAACAGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: IIRKRTEILLVNIGNGTVPLFWW*TFSNSF Trigger: AAAGCTGTTGGAGAATGTGCACCACCAAAATAAGGG...TACTGTCCCATTGCCAATGTTAACGAGCAATATCTCTGTTCTTTTCCTTATTAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000399910.5 |
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| CDS-3UTR GCA 90 bp | ACCAGTGTCTTCTGGAAGAGATATAAACATCTTCCTGAAGCACTAGCCTTTTGTAAAGAACAGAGATATTaGTCGTTAACATTGGCAATG | + |
|
Preference number: 4 (lower is better) Translates to: TSVFWKRYKHLPEALAFCKEQRY*SLTLAM Trigger: CATTGCCAATGTTAACGAGCAATATCTCTGTTCTTT...ACAAAAGGCTAGTGCTTCAGGAAGATGTTTATATCTCTTCCAGAAGACACTGGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000399905.5 ENST00000399910.5 |
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| CDS-3UTR GCA 90 bp | ACAGAGATATTGCTCGTTAACATTGGCAATGGGACAGTATATCCAAAGCTAAAAAAAGAACAGAGATATTaGTCGTTAACATTGGCAATG | + |
|
Preference number: 4 (lower is better) Translates to: TEILLVNIGNGTVYPKLKKEQRY*SLTLAM Trigger: CATTGCCAATGTTAACGAGCAATATCTCTGTTCTTT...TTTTAGCTTTGGATATACTGTCCCATTGCCAATGTTAACGAGCAATATCTCTGT 36% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt. Matches the following 2 transcripts: ENST00000399905.5 ENST00000399910.5 |
||
| CDS-3UTR CAA 90 bp | CCAGGGCCATCACCCCTAATGCGTACTGGAAGCTACAGTCCATCCTTCAGCAGCGCTGAGGAGGACCGATaGTCCTGGCTCACCAGTGCT | + |
|
Preference number: 5 (lower is better) Translates to: PGPSPLMRTGSYSPSFSSAEEDR*SWLTSA Trigger: AGCACTGGTGAGCCAGGACAATCGGTCCTCCTCAGC...GCTGCTGAAGGATGGACTGTAGCTTCCAGTACGCATTAGGGGTGATGGCCCTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000399905.5 |
||
| CDS CCA 90 bp | TGCCACAGGCAGTGCCTCTTTATTTCTTTCCCACTAGTGCTGGGCTaGCTCCATGGAATCCCACCAAGTGCAGCAGACAGAGGAGTAATC | + |
|
Preference number: 5 (lower is better) Translates to: CHRQCLFISFPLVLG*LHGIPPSAADRGVI Trigger: GATTACTCCTCTGTCTGCTGCACTTGGTGGGATTCCATGGAGCCAGCCCAGCACTAGTGGGAAAGAAATAAAGAGGCACTGCCTGTGGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000498441.1 |
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| CDS-3UTR CAA 90 bp | GGGATACATTTTCCAGGGCCATCACCCCTAATGCGTACTGGAAGCTACAGTCCACATATGCCTCCGTTGTaGGTAGAGAGTCTGCAGGAC | + |
|
Preference number: 5 (lower is better) Translates to: GIHFPGPSPLMRTGSYSPHMPPL*VESLQD Trigger: GTCCTGCAGACTCTCTACCAACAACGGAGGCATATG...TGGACTGTAGCTTCCAGTACGCATTAGGGGTGATGGCCCTGGAAAATGTATCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000399905.5 ENST00000399910.5 |
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| CDS CCA 90 bp | GCAGTGCCTCTTTATTTCTTTCCCACTAGTGCTGGGCTGGCTCCATaGAATCCCACCAAGTGCAGCAGACAGAGGAGTAATCTGTTGGAA | + |
|
Preference number: 5 (lower is better) Translates to: AVPLYFFPTSAGLAP*NPTKCSRQRSNLLE Trigger: TTCCAACAGATTACTCCTCTGTCTGCTGCACTTGGTGGGATTCCATGGAGCCAGCCCAGCACTAGTGGGAAAGAAATAAAGAGGCACTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000498441.1 |
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| CDS-3UTR CAA 90 bp | GAAATGAGGGGAGCTACCAGTGTCTTCTGGAAGAGATATAAACATCTTCCTGAACTGGCTCACCAGTGCTaGCTGTGCCTCCTGCATGGC | + |
|
Preference number: 5 (lower is better) Translates to: EMRGATSVFWKRYKHLPELAHQC*LCLLHG Trigger: GCCATGCAGGAGGCACAGCAAGCACTGGTGAGCCAG...TTCAGGAAGATGTTTATATCTCTTCCAGAAGACACTGGTAGCTCCCCTCATTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000399905.5 ENST00000399910.5 |
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| CDS-3UTR CAA 90 bp | CAGAGTGAAACTAGGAAACAATGCAGGGATACATTTTCCAGGGCCATCACCCCTCCGGTGAAGGGGTTTTaGTCCCAAGCTACCAAAGCC | + |
|
Preference number: 5 (lower is better) Translates to: QSETRKQCRDTFSRAITPPVKGF*SQATKA Trigger: GGCTTTGGTAGCTTGGGACAAAAACCCCTTCACCGG...AGGGGTGATGGCCCTGGAAAATGTATCCCTGCATTGTTTCCTAGTTTCACTCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000399905.5 |
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| CDS GCA 90 bp | TTCTTTCCCACTAGTGCTGGGCTGGCTCCATGGAATCCCACCAAGTaGAGCAGACAGAGGAGTAATCTGTTGGAATTTTTGTCTCTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: FFPTSAGLAPWNPTK*SRQRSNLLEFLSLV Trigger: CACCAGAGACAAAAATTCCAACAGATTACTCCTCTGTCTGCTGCACTTGGTGGGATTCCATGGAGCCAGCCCAGCACTAGTGGGAAAGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000498441.1 |
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| CDS-3UTR CAA 90 bp | AGGGATACATTTTCCAGGGCCATCACCCCTAATGCGTACTGGAAGCTACAGTCCAAGACTGACAATTCTTaGTCCTGGCTCACCAGTGCT | + |
|
Preference number: 5 (lower is better) Translates to: RDTFSRAITPNAYWKLQSKTDNS*SWLTSA Trigger: AGCACTGGTGAGCCAGGACAAAGAATTGTCAGTCTT...GGACTGTAGCTTCCAGTACGCATTAGGGGTGATGGCCCTGGAAAATGTATCCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000399910.5 |
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| CDS-3UTR CAA 90 bp | AGGTACAGAGTGAAACTAGGAAACAATGCAGGGATACATTTTCCAGGGCCATCAGGACCGACTGACCACTaGACTGCTATGCTGGAAACT | + |
|
Preference number: 5 (lower is better) Translates to: RYRVKLGNNAGIHFPGPSGPTDH*TAMLET Trigger: AGTTTCCAGCATAGCAGTCAAGTGGTCAGTCGGTCC...TGATGGCCCTGGAAAATGTATCCCTGCATTGTTTCCTAGTTTCACTCTGTACCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000399910.5 |
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| CDS-3UTR CAA 90 bp | GGAAAAGAACAGAGATATTGCTCGTTAACATTGGCAATGGGACAGTATATCCAACAGACCTCTGCCTCCTaGTCCCAAGCTACCAAAGCC | + |
|
Preference number: 5 (lower is better) Translates to: GKEQRYCSLTLAMGQYIQQTSAS*SQATKA Trigger: GGCTTTGGTAGCTTGGGACAAGGAGGCAGAGGTCTG...TTGGATATACTGTCCCATTGCCAATGTTAACGAGCAATATCTCTGTTCTTTTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000399910.5 |
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| CDS-3UTR CAA 90 bp | GGAGCTACCAGTGTCTTCTGGAAGAGATATAAACATCTTCCTGAAGCACTAGCCAAGATAGGCTATGAGTaGAAGCCGGTGAAGGGGTTT | + |
|
Preference number: 5 (lower is better) Translates to: GATSVFWKRYKHLPEALAKIGYE*KPVKGF Trigger: AAACCCCTTCACCGGCTTCAACTCATAGCCTATCTT...GGCTAGTGCTTCAGGAAGATGTTTATATCTCTTCCAGAAGACACTGGTAGCTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000399905.5 ENST00000399910.5 |
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| CDS-3UTR CAA 90 bp | GAAATGAGGGGAGCTACCAGTGTCTTCTGGAAGAGATATAAACATCTTCCTGAACATATGCCTCCGTTGTaGGTAGAGAGTCTGCAGGAC | + |
|
Preference number: 5 (lower is better) Translates to: EMRGATSVFWKRYKHLPEHMPPL*VESLQD Trigger: GTCCTGCAGACTCTCTACCAACAACGGAGGCATATG...TTCAGGAAGATGTTTATATCTCTTCCAGAAGACACTGGTAGCTCCCCTCATTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000399905.5 ENST00000399910.5 |
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| CDS-3UTR CAA 90 bp | GAAATGAGGGGAGCTACCAGTGTCTTCTGGAAGAGATATAAACATCTTCCTGAATCCCATATGCCTCCGTaGTTGGTAGAGAGTCTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: EMRGATSVFWKRYKHLPESHMPP*LVESLQ Trigger: CTGCAGACTCTCTACCAACAACGGAGGCATATGGGA...TTCAGGAAGATGTTTATATCTCTTCCAGAAGACACTGGTAGCTCCCCTCATTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000399905.5 ENST00000399910.5 |
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| CDS TCA 90 bp | GTGACAAAGAAATGGGCCCCATCTTTTCGGAAGCACTGGTTGCAATaGAACCAATCCATTCTTATTCCTGAACTCAGGGTCTTCTTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: VTKKWAPSFRKHWLQ*NQSILIPELRVFFL Trigger: GAGGAAGAAGACCCTGAGTTCAGGAATAAGAATGGATTGGTTTCATTGCAACCAGTGCTTCCGAAAAGATGGGGCCCATTTCTTTGTCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000399910.5 ENST00000492621.5 |
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| CDS GCA 90 bp | ACATCTTCTCCTGAGGCTTCAGATTATCAGAAAGAGCCAGATGCTTaGAGGCAGTTCCACAAACAGCACATTTTTCCAGAGTCACACACT | + |
|
Preference number: 5 (lower is better) Translates to: TSSPEASDYQKEPDA*RQFHKQHIFPESHT Trigger: AGTGTGTGACTCTGGAAAAATGTGCTGTTTGTGGAACTGCCTGCAAGCATCTGGCTCTTTCTGATAATCTGAAGCCTCAGGAGAAGATGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000399910.5 ENST00000430154.6 ENST00000492621.5 |
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| CDS-3UTR CAA 90 bp | GAAATGAGGGGAGCTACCAGTGTCTTCTGGAAGAGATATAAACATCTTCCTGAACAGTGCTTTCTAAGGTaGTCAGGAAAGGCTAGAGGC | + |
|
Preference number: 5 (lower is better) Translates to: EMRGATSVFWKRYKHLPEQCFLR*SGKARG Trigger: GCCTCTAGCCTTTCCTGACAACCTTAGAAAGCACTG...TTCAGGAAGATGTTTATATCTCTTCCAGAAGACACTGGTAGCTCCCCTCATTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000399910.5 |
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| CDS-3UTR CAA 90 bp | TTGTTCCAAATTGTAGGAAATGAGGGGAGCTACCAGTGTCTTCTGGAAGAGATAGAAAGAGCCAGATGCTaGCAGGCAGTTCCACAAACA | + |
|
Preference number: 5 (lower is better) Translates to: LFQIVGNEGSYQCLLEEIERARC*QAVPQT Trigger: TGTTTGTGGAACTGCCTGCAAGCATCTGGCTCTTTC...TATCTCTTCCAGAAGACACTGGTAGCTCCCCTCATTTCCTACAATTTGGAACAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000399910.5 |
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| CDS-3UTR CAA 90 bp | AGGTACAGAGTGAAACTAGGAAACAATGCAGGGATACATTTTCCAGGGCCATCAAAGATAGGCTATGAGTaGAAGCCGGTGAAGGGGTTT | + |
|
Preference number: 5 (lower is better) Translates to: RYRVKLGNNAGIHFPGPSKIGYE*KPVKGF Trigger: AAACCCCTTCACCGGCTTCAACTCATAGCCTATCTT...TGATGGCCCTGGAAAATGTATCCCTGCATTGTTTCCTAGTTTCACTCTGTACCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000399905.5 ENST00000399910.5 |
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| CDS-3UTR CAA 90 bp | GATACATTTTCCAGGGCCATCACCCCTAATGCGTACTGGAAGCTACAGTCCATCTATTGCTCGTTAACATaGGCAATGGGACAGTATATC | + |
|
Preference number: 5 (lower is better) Translates to: DTFSRAITPNAYWKLQSIYCSLT*AMGQYI Trigger: GATATACTGTCCCATTGCCAATGTTAACGAGCAATA...GATGGACTGTAGCTTCCAGTACGCATTAGGGGTGATGGCCCTGGAAAATGTATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000399905.5 ENST00000399910.5 |
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| CDS CCA 90 bp | CTCCATGGAATCCCACCAAGTGCAGCAGACAGAGGAGTAATCTGTTaGAATTTTTGTCTCTGGTGTCAGAGCAAGGATTCATCATTATCT | + |
|
Preference number: 5 (lower is better) Translates to: LHGIPPSAADRGVIC*NFCLWCQSKDSSLS Trigger: AGATAATGATGAATCCTTGCTCTGACACCAGAGACAAAAATTCCAACAGATTACTCCTCTGTCTGCTGCACTTGGTGGGATTCCATGGAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000498441.1 |
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| CDS-3UTR CAA 90 bp | GATACATTTTCCAGGGCCATCACCCCTAATGCGTACTGGAAGCTACAGTCCATCTTTTATATGGTGATGTaGAAATCGGAGCAGAAGTCT | + |
|
Preference number: 5 (lower is better) Translates to: DTFSRAITPNAYWKLQSIFYMVM*KSEQKS Trigger: AGACTTCTGCTCCGATTTCAACATCACCATATAAAA...GATGGACTGTAGCTTCCAGTACGCATTAGGGGTGATGGCCCTGGAAAATGTATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000399910.5 |
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| CDS-3UTR CAA 90 bp | AAAGAACAGAGATATTGCTCGTTAACATTGGCAATGGGACAGTATATCCAAAGCTCCCATATGCCTCCGTaGTTGGTAGAGAGTCTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: KEQRYCSLTLAMGQYIQSSHMPP*LVESLQ Trigger: CTGCAGACTCTCTACCAACAACGGAGGCATATGGGA...GCTTTGGATATACTGTCCCATTGCCAATGTTAACGAGCAATATCTCTGTTCTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000399905.5 ENST00000399910.5 |
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| CDS CCA 90 bp | CCAAGTGCAGCAGACAGAGGAGTAATCTGTTGGAATTTTTGTCTCTaGTGTCAGAGCAAGGATTCATCATTATCTCCAGAAGAGCTGAAT | + |
|
Preference number: 5 (lower is better) Translates to: PSAADRGVICWNFCL*CQSKDSSLSPEELN Trigger: ATTCAGCTCTTCTGGAGATAATGATGAATCCTTGCTCTGACACCAGAGACAAAAATTCCAACAGATTACTCCTCTGTCTGCTGCACTTGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000498441.1 |
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| CDS-3UTR CAA 90 bp | GGAAGCTACAGTCCATCCTTCAGCAGCATGTATAGATCAGATCTTGAAGATGATGGGAAAAACAAGCCTTaGACATACTCTCCCATAACT | + |
|
Preference number: 5 (lower is better) Translates to: GSYSPSFSSMYRSDLEDDGKNKP*TYSPIT Trigger: AGTTATGGGAGAGTATGTCAAAGGCTTGTTTTTCCC...ATCATCTTCAAGATCTGATCTATACATGCTGCTGAAGGATGGACTGTAGCTTCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000399905.5 |
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| CDS-3UTR CAA 90 bp | AGATCAGATCTTGAAGATGATCTATCTAGAAGTGGTCCATGCTTCTCTCCCACTTATTGCTCGTTAACATaGGCAATGGGACAGTATATC | + |
|
Preference number: 5 (lower is better) Translates to: RSDLEDDLSRSGPCFSPTYCSLT*AMGQYI Trigger: GATATACTGTCCCATTGCCAATGTTAACGAGCAATA...AGTGGGAGAGAAGCATGGACCACTTCTAGATAGATCATCTTCAAGATCTGATCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000399905.5 |
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| CDS-3UTR CAA 90 bp | GGAAAAGAACAGAGATATTGCTCGTTAACATTGGCAATGGGACAGTATATCCAACATTCTCCAACAGCTTaGTTTAAGAAGCAGAAACAT | + |
|
Preference number: 5 (lower is better) Translates to: GKEQRYCSLTLAMGQYIQHSPTA*FKKQKH Trigger: ATGTTTCTGCTTCTTAAACAAAGCTGTTGGAGAATG...TTGGATATACTGTCCCATTGCCAATGTTAACGAGCAATATCTCTGTTCTTTTCC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000399910.5 |
||
| CDS GCA 72 bp | GCTGAGGAGGACCGATTGTCCTGGCTCACCAGTGCTTaGTGTGCCTCCTGCATGGCTGTTTCTAACTTTGTA | + |
|
Preference number: 6 (lower is better) Translates to: AEEDRLSWLTSA*CASCMAVSNFV Trigger: TACAAAGTTAGAAACAGCCATGCAGGAGGCACAGCAAGCACTGGTGAGCCAGGACAATCGGTCCTCCTCAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000399905.5 ENST00000470456.1 |
||
| CDS TCA 72 bp | ACCAAAGCCAGCCTCTCTATAAGGAATAGATTCCGCTaGGGAGGACCGATTGTCCTGGCTCACCAGTGCTTG | + |
|
Preference number: 6 (lower is better) Translates to: TKASLSIRNRFR*GGPIVLAHQCL Trigger: CAAGCACTGGTGAGCCAGGACAATCGGTCCTCCTCAGCGGAATCTATTCCTTATAGAGAGGCTGGCTTTGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000399905.5 ENST00000470456.1 |
||
| CDS CCA 72 bp | CAGTGCCTCTTTATTTCTTTCCCACTAGTGCTGGGCTaGCTCCATGGAATCCCACCAAGTGCAGCAGACAGA | + |
|
Preference number: 6 (lower is better) Translates to: QCLFISFPLVLG*LHGIPPSAADR Trigger: TCTGTCTGCTGCACTTGGTGGGATTCCATGGAGCCAGCCCAGCACTAGTGGGAAAGAAATAAAGAGGCACTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000498441.1 |
||
| CDS TCA 72 bp | ACCAAAGCCAGCCTCTCTATAAGGAATAGATTCCGCTaGGGAGGACCGACTGACCACTTGACTGCTATGCTG | + |
|
Preference number: 6 (lower is better) Translates to: TKASLSIRNRFR*GGPTDHLTAML Trigger: CAGCATAGCAGTCAAGTGGTCAGTCGGTCCTCCTCAGCGGAATCTATTCCTTATAGAGAGGCTGGCTTTGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000399910.5 ENST00000430154.6 ENST00000463881.1 |
||
| CDS TCA 72 bp | ACCAAAGCCAGCCTCTCTATAAGGAATAGATTCCGCTaGGGAGGACCGACTGACTGTGATGGGGAAGTAATG | + |
|
Preference number: 6 (lower is better) Translates to: TKASLSIRNRFR*GGPTDCDGEVM Trigger: CATTACTTCCCCATCACAGTCAGTCGGTCCTCCTCAGCGGAATCTATTCCTTATAGAGAGGCTGGCTTTGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000470818.5 |
||
| CDS GCA 72 bp | ACTAGTGCTGGGCTGGCTCCATGGAATCCCACCAAGTaGAGCAGACAGAGGAGTAATCTGTTGGAATTTTTG | + |
|
Preference number: 6 (lower is better) Translates to: TSAGLAPWNPTK*SRQRSNLLEFL Trigger: CAAAAATTCCAACAGATTACTCCTCTGTCTGCTGCACTTGGTGGGATTCCATGGAGCCAGCCCAGCACTAGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000498441.1 |
||
| CDS CCA 72 bp | CTTTATTTCTTTCCCACTAGTGCTGGGCTGGCTCCATaGAATCCCACCAAGTGCAGCAGACAGAGGAGTAAT | + |
|
Preference number: 6 (lower is better) Translates to: LYFFPTSAGLAP*NPTKCSRQRSN Trigger: ATTACTCCTCTGTCTGCTGCACTTGGTGGGATTCCATGGAGCCAGCCCAGCACTAGTGGGAAAGAAATAAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000498441.1 |
||
| CDS GCA 72 bp | CCTGAGGCTTCAGATTATCAGAAAGAGCCAGATGCTTaGAGGCAGTTCCACAAACAGCACATTTTTCCAGAG | + |
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Preference number: 6 (lower is better) Translates to: PEASDYQKEPDA*RQFHKQHIFPE Trigger: CTCTGGAAAAATGTGCTGTTTGTGGAACTGCCTGCAAGCATCTGGCTCTTTCTGATAATCTGAAGCCTCAGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000399910.5 ENST00000430154.6 ENST00000492621.5 |
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| CDS GCA 72 bp | AAGACTGACAATTCTTTGTCCTGGCTCACCAGTGCTTaGTGTGCCTCCTGCATGGCTGTTTCTAACTTTGTA | + |
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Preference number: 6 (lower is better) Translates to: KTDNSLSWLTSA*CASCMAVSNFV Trigger: TACAAAGTTAGAAACAGCCATGCAGGAGGCACAGCAAGCACTGGTGAGCCAGGACAAAGAATTGTCAGTCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000399910.5 ENST00000430154.6 |
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| CDS CAA 90 bp | GCTCCATGGAATCCCACCAAGTGCAGCAGACAGAGGAGTAATCTGTaGGAATTTTTGTCTCTGGTGTCAGAGCAAGGATTCATCATTATC | + |
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Preference number: 6 (lower is better) Translates to: APWNPTKCSRQRSNL*EFLSLVSEQGFIII Trigger: GATAATGATGAATCCTTGCTCTGACACCAGAGACAAAAATTCCAACAGATTACTCCTCTGTCTGCTGCACTTGGTGGGATTCCATGGAGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000498441.1 |
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| CDS TCA 72 bp | AAATGGGCCCCATCTTTTCGGAAGCACTGGTTGCAATaGAACCAATCCATTCTTATTCCTGAACTCAGGGTC | + |
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Preference number: 6 (lower is better) Translates to: KWAPSFRKHWLQ*NQSILIPELRV Trigger: GACCCTGAGTTCAGGAATAAGAATGGATTGGTTTCATTGCAACCAGTGCTTCCGAAAAGATGGGGCCCATTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000399910.5 ENST00000492621.5 |
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| CDS CCA 72 bp | ATCCCACCAAGTGCAGCAGACAGAGGAGTAATCTGTTaGAATTTTTGTCTCTGGTGTCAGAGCAAGGATTCA | + |
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Preference number: 6 (lower is better) Translates to: IPPSAADRGVIC*NFCLWCQSKDS Trigger: TGAATCCTTGCTCTGACACCAGAGACAAAAATTCCAACAGATTACTCCTCTGTCTGCTGCACTTGGTGGGAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000498441.1 |
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| CDS CAA 72 bp | AATCCCACCAAGTGCAGCAGACAGAGGAGTAATCTGTaGGAATTTTTGTCTCTGGTGTCAGAGCAAGGATTC | + |
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Preference number: 6 (lower is better) Translates to: NPTKCSRQRSNL*EFLSLVSEQGF Trigger: GAATCCTTGCTCTGACACCAGAGACAAAAATTCCAACAGATTACTCCTCTGTCTGCTGCACTTGGTGGGATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000498441.1 |
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| CDS CAA 90 bp | AATCCCACCAAGTGCAGCAGACAGAGGAGTAATCTGTTGGAATTTTaGTCTCTGGTGTCAGAGCAAGGATTCATCATTATCTCCAGAAGA | + |
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Preference number: 6 (lower is better) Translates to: NPTKCSRQRSNLLEF*SLVSEQGFIIISRR Trigger: TCTTCTGGAGATAATGATGAATCCTTGCTCTGACACCAGAGACAAAAATTCCAACAGATTACTCCTCTGTCTGCTGCACTTGGTGGGATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000498441.1 |
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| CDS GCA 72 bp | CAAAGAAATGGGCCCCATCTTTTCGGAAGCACTGGTTaGAATGAAACCAATCCATTCTTATTCCTGAACTCA | + |
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Preference number: 6 (lower is better) Translates to: QRNGPHLFGSTG*NETNPFLFLNS Trigger: TGAGTTCAGGAATAAGAATGGATTGGTTTCATTGCAACCAGTGCTTCCGAAAAGATGGGGCCCATTTCTTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000399910.5 ENST00000492621.5 |
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| CDS CAA 72 bp | AGGAGGCAGATGAAGTTCTATAAGATAGGCTATGAGTaGAAGCCGGTGAAGGGGTTTCATTATAAGAGTCTC | + |
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Preference number: 6 (lower is better) Translates to: RRQMKFYKIGYE*KPVKGFHYKSL Trigger: GAGACTCTTATAATGAAACCCCTTCACCGGCTTCAACTCATAGCCTATCTTATAGAACTTCATCTGCCTCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000399910.5 ENST00000430154.6 ENST00000463881.1 ENST00000492355.5 |
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| CDS CCA 72 bp | GCAGACAGAGGAGTAATCTGTTGGAATTTTTGTCTCTaGTGTCAGAGCAAGGATTCATCATTATCTCCAGAA | + |
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Preference number: 6 (lower is better) Translates to: ADRGVICWNFCL*CQSKDSSLSPE Trigger: TTCTGGAGATAATGATGAATCCTTGCTCTGACACCAGAGACAAAAATTCCAACAGATTACTCCTCTGTCTGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000498441.1 |
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| CDS CAA 72 bp | AAGTGCAGCAGACAGAGGAGTAATCTGTTGGAATTTTaGTCTCTGGTGTCAGAGCAAGGATTCATCATTATC | + |
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Preference number: 6 (lower is better) Translates to: KCSRQRSNLLEF*SLVSEQGFIII Trigger: GATAATGATGAATCCTTGCTCTGACACCAGAGACAAAAATTCCAACAGATTACTCCTCTGTCTGCTGCACTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000498441.1 |
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