RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RNF212 (Homo sapiens)

Ensembl gene IDs: ENSG00000178222

Ensembl transcript IDs: ENST00000333673.5, ENST00000382968.9, ENST00000433731.7, ENST00000454487.6, ENST00000503206.5, ENST00000505693.5, ENST00000505730.1, ENST00000506730.5, ENST00000508428.5, ENST00000508633.5, ENST00000510715.5, ENST00000511620.5, ENST00000512552.1, ENST00000514024.5, ENST00000514757.5

Found 395 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp ACAGACACAGCGGGTGTTCTGAACGTGTCCAGGGTGCCCTCAGCCTaGTGGAACGGAAACAAGACGGCCCTTTGTACCTCAGCATATATT +
Preference number: 1 (lower is better)
Translates to: TDTAGVLNVSRVPSA*WNGNKTALCTSAYI
Trigger: AATATATGCTGAGGTACAAAGGGCCGTCTTGTTTCCGTTCCAGCAGGCTGAGGGCACCCTGGACACGTTCAGAACACCCGCTGTGTCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382968.9
ENST00000508428.5
ENST00000511620.5
3UTR TCA 90 bp AGTTCCCCGTGCCTTCCAGAACTGAACGCTAGGAGGAGCAGCCAGTaGGGACAGACGTCTATGCAGAAACATGGTGAACCTCTGGAAATG +
Preference number: 1 (lower is better)
Translates to: SSPCLPELNARRSSQ*GQTSMQKHGEPLEM
Trigger: CATTTCCAGAGGTTCACCATGTTTCTGCATAGACGTCTGTCCTCACTGGCTGCTCCTCCTAGCGTTCAGTTCTGGAAGGCACGGGGAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000508428.5
ENST00000510715.5
ENST00000511620.5
3UTR GCA 90 bp ACACATGGACTGCTCTGGTGGAGGATGAGGATGATGGGGGAGCTGTaGGTGTGTGGAGTCATGGTGTATATGGGAAATCTGTACCTTCCT +
Preference number: 1 (lower is better)
Translates to: THGLLWWRMRMMGEL*VCGVMVYMGNLYLP
Trigger: AGGAAGGTACAGATTTCCCATATACACCATGACTCCACACACGCACAGCTCCCCCATCATCCTCATCCTCCACCAGAGCAGTCCATGTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000382968.9
ENST00000433731.7
3UTR TCA 90 bp TTTCAAATTGGCAAAGAGGAAACACAACAGACACAGCGGGTGTTCTaGACGTGTCCAGGGTGCCCTCAGCCTGCTGGAACGGAAACAAGA +
Preference number: 1 (lower is better)
Translates to: FQIGKEETQQTQRVF*TCPGCPQPAGTETR
Trigger: TCTTGTTTCCGTTCCAGCAGGCTGAGGGCACCCTGGACACGTTCAGAACACCCGCTGTGTCTGTTGTGTTTCCTCTTTGCCAATTTGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382968.9
ENST00000508428.5
ENST00000511620.5
3UTR GCA 90 bp TTCCCTGGAGTACTTCTTACACAGACTGTCTATGCTCATGAAGAATaGCTGGATATCTGCGTCGGTAGCGTGACTGAAGGCCTTTGCTGC +
Preference number: 1 (lower is better)
Translates to: FPGVLLTQTVYAHEE*LDICVGSVTEGLCC
Trigger: GCAGCAAAGGCCTTCAGTCACGCTACCGACGCAGATATCCAGGCATTCTTCATGAGCATAGACAGTCTGTGTAAGAAGTACTCCAGGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510715.5
3UTR CCA 90 bp TGTATTCAAGTAGGATCATCAGTTTTAACACATGGACTGCTCTGGTaGAGGATGAGGATGATGGGGGAGCTGTGCGTGTGTGGAGTCATG +
Preference number: 1 (lower is better)
Translates to: CIQVGSSVLTHGLLW*RMRMMGELCVCGVM
Trigger: CATGACTCCACACACGCACAGCTCCCCCATCATCCTCATCCTCCACCAGAGCAGTCCATGTGTTAAAACTGATGATCCTACTTGAATACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000382968.9
ENST00000433731.7
3UTR CCA 90 bp CTGCTGGAACGGAAACAAGACGGCCCTTTGTACCTCAGCATATATTaGAAGTGTTTTAGAGTTGGTGAGTTCCCCGTGCCTTCCAGAACT +
Preference number: 1 (lower is better)
Translates to: LLERKQDGPLYLSIY*KCFRVGEFPVPSRT
Trigger: AGTTCTGGAAGGCACGGGGAACTCACCAACTCTAAAACACTTCCAATATATGCTGAGGTACAAAGGGCCGTCTTGTTTCCGTTCCAGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000508428.5
ENST00000510715.5
ENST00000511620.5
3UTR TCA 90 bp AATCTGAGAAGCCACATACTGTACAATTCCAACTCCAGGAGAGTCTaGAAAAGGGACCGTAAAAAGATCAGTGGCTGTCAAGGGTTGGTG +
Preference number: 1 (lower is better)
Translates to: NLRSHILYNSNSRRV*KRDRKKISGCQGLV
Trigger: CACCAACCCTTGACAGCCACTGATCTTTTTACGGTCCCTTTTTCAGACTCTCCTGGAGTTGGAATTGTACAGTATGTGGCTTCTCAGATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000382968.9
ENST00000433731.7
3UTR CCA 90 bp GAACATTCGACACCTAGAGTGAACCCTAATGTAAACCATGGACGTTaGGTGATAATGATGTATTCAAGTAGGATCATCAGTTTTAACACA +
Preference number: 1 (lower is better)
Translates to: EHSTPRVNPNVNHGR*VIMMYSSRIISFNT
Trigger: TGTGTTAAAACTGATGATCCTACTTGAATACATCATTATCACCCAACGTCCATGGTTTACATTAGGGTTCACTCTAGGTGTCGAATGTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382968.9
ENST00000433731.7
3UTR TCA 90 bp TCAACTTCCATCGACTCCAGTTTGAAACTGAACTTTTTATTGTGCTaGAAGCTGTTTGTTGTGATGATCTCATACTTTGTAGTTGTTCTA +
Preference number: 1 (lower is better)
Translates to: STSIDSSLKLNFLLC*KLFVVMISYFVVVL
Trigger: TAGAACAACTACAAAGTATGAGATCATCACAACAAACAGCTTTCAGCACAATAAAAAGTTCAGTTTCAAACTGGAGTCGATGGAAGTTGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000508428.5
3UTR-3UTR CCA 90 bp AGGAAACACAACAGACACAGCGGGTGTTCTGAACGTGTCCAGGGTGCCCTCAGCGTGCCCTCAGCCTGCTaGAACGGAAACAAGACGGCC +
Preference number: 2 (lower is better)
Translates to: RKHNRHSGCSERVQGALSVPSAC*NGNKTA
Trigger: GGCCGTCTTGTTTCCGTTCCAGCAGGCTGAGGGCAC...GCTGAGGGCACCCTGGACACGTTCAGAACACCCGCTGTGTCTGTTGTGTTTCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382968.9
ENST00000508428.5
ENST00000511620.5
3UTR-3UTR GCA 90 bp CACTCTCCGGGCACAGGGGGCCATTCGTCCATCTTGAGGTGGACTAATCATGGAAGGGTGCCCTCAGCCTaGTGGAACGGAAACAAGACG +
Preference number: 2 (lower is better)
Translates to: HSPGTGGHSSILRWTNHGRVPSA*WNGNKT
Trigger: CGTCTTGTTTCCGTTCCAGCAGGCTGAGGGCACCCT...TCCATGATTAGTCCACCTCAAGATGGACGAATGGCCCCCTGTGCCCGGAGAGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000508428.5
ENST00000510715.5
3UTR-3UTR GCA 90 bp CAAAGAGGAAACACAACAGACACAGCGGGTGTTCTGAACGTGTCCAGGGTGCCCAGGGTGCCCTCAGCCTaGTGGAACGGAAACAAGACG +
Preference number: 2 (lower is better)
Translates to: QRGNTTDTAGVLNVSRVPRVPSA*WNGNKT
Trigger: CGTCTTGTTTCCGTTCCAGCAGGCTGAGGGCACCCT...GGGCACCCTGGACACGTTCAGAACACCCGCTGTGTCTGTTGTGTTTCCTCTTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382968.9
ENST00000508428.5
ENST00000511620.5
3UTR-3UTR TCA 90 bp GGAGATTCTCGCAGGGCCGGCTGCTATCTCAGACTTTGTAGTTGTTCTATCTGCTCTGCGTCGGTAGCGTaGCTGAAGGCCTTTGCTGCG +
Preference number: 2 (lower is better)
Translates to: GDSRRAGCYLRLCSCSICSASVA*LKAFAA
Trigger: CGCAGCAAAGGCCTTCAGTCACGCTACCGACGCAGA...GCAGATAGAACAACTACAAAGTCTGAGATAGCAGCCGGCCCTGCGAGAATCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510715.5
3UTR-3UTR GCA 90 bp TGGCAAAGAGGAAACACAACAGACACAGCGGGTGTTCTGAACGTGTCCAGGGTGAGGGTGCCCTCAGCCTaGTGGAACGGAAACAAGACG +
Preference number: 2 (lower is better)
Translates to: WQRGNTTDTAGVLNVSRVRVPSA*WNGNKT
Trigger: CGTCTTGTTTCCGTTCCAGCAGGCTGAGGGCACCCT...CACCCTGGACACGTTCAGAACACCCGCTGTGTCTGTTGTGTTTCCTCTTTGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382968.9
ENST00000508428.5
ENST00000511620.5
3UTR-3UTR GCA 90 bp GAGTTGGTGAGTTCCCCGTGCCTTCCAGAACTGAACGCTAGGAGGAGCAGCCAGGAATGCCTGGATATCTaGGTCGGTAGCGTGACTGAA +
Preference number: 2 (lower is better)
Translates to: ELVSSPCLPELNARRSSQECLDI*VGSVTE
Trigger: TTCAGTCACGCTACCGACGCAGATATCCAGGCATTC...CTGGCTGCTCCTCCTAGCGTTCAGTTCTGGAAGGCACGGGGAACTCACCAACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510715.5
3UTR-3UTR CCA 90 bp GATTCTCGCAGGGCCGGCTGCTATCTCAGATTTTCTAATCGGAGAAGGAGAGAGGTGCCCTCAGCCTGCTaGAACGGAAACAAGACGGCC +
Preference number: 2 (lower is better)
Translates to: DSRRAGCYLRFSNRRRREVPSAC*NGNKTA
Trigger: GGCCGTCTTGTTTCCGTTCCAGCAGGCTGAGGGCAC...CTCTCTCCTTCTCCGATTAGAAAATCTGAGATAGCAGCCGGCCCTGCGAGAATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508428.5
3UTR-3UTR TCA 90 bp GTTTTAGAGTTGGTGAGTTCCCCGTGCCTTCCAGAACTGAACGCTAGGAGGAGCGTGAACCTCTGGAAATaGCACACTCTCCGGGCACAG +
Preference number: 2 (lower is better)
Translates to: VLELVSSPCLPELNARRSVNLWK*HTLRAQ
Trigger: CTGTGCCCGGAGAGTGTGTCATTTCCAGAGGTTCAC...GCTCCTCCTAGCGTTCAGTTCTGGAAGGCACGGGGAACTCACCAACTCTAAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000508428.5
ENST00000510715.5
ENST00000511620.5
3UTR-3UTR TCA 90 bp ATCATGGAGATTCTCGCAGGGCCGGCTGCTATCTCAGATTTTCTAATCGGAGAAACACAGCGGGTGTTCTaGACGTGTCCAGGGTGCCCT +
Preference number: 2 (lower is better)
Translates to: IMEILAGPAAISDFLIGETQRVF*TCPGCP
Trigger: AGGGCACCCTGGACACGTTCAGAACACCCGCTGTGT...TTCTCCGATTAGAAAATCTGAGATAGCAGCCGGCCCTGCGAGAATCTCCATGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508428.5
3UTR-3UTR TCA 90 bp CAAAGAGGAAACACAACAGACACAGCGGGTGTTCTGAACGTGTCCAGGGTGCCCCCCATTCGTCCATCTTaGGGTGGACTAATCATGGAG +
Preference number: 2 (lower is better)
Translates to: QRGNTTDTAGVLNVSRVPPIRPS*GGLIME
Trigger: CTCCATGATTAGTCCACCTCAAGATGGACGAATGGG...GGGCACCCTGGACACGTTCAGAACACCCGCTGTGTCTGTTGTGTTTCCTCTTTG
53% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000511620.5
3UTR-3UTR CCA 90 bp ACTAATCATGGAGATTCTCGCAGGGCCGGCTGCTATCTCAGACTTTGTAGTTGTGTGCCCTCAGCCTGCTaGAACGGAAACAAGACGGCC +
Preference number: 2 (lower is better)
Translates to: TNHGDSRRAGCYLRLCSCVPSAC*NGNKTA
Trigger: GGCCGTCTTGTTTCCGTTCCAGCAGGCTGAGGGCAC...ACAACTACAAAGTCTGAGATAGCAGCCGGCCCTGCGAGAATCTCCATGATTAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510715.5
3UTR-3UTR TCA 90 bp AGGGTGCCCTCAGCCTGCTGGAACGGAAACAAGACGGCCCTTTGTACCTCAGCATATGCAGAAACATGGTaGACCTCTGGAAATGACACA +
Preference number: 2 (lower is better)
Translates to: RVPSACWNGNKTALCTSAYAETW*TSGNDT
Trigger: TGTGTCATTTCCAGAGGTTCACCATGTTTCTGCATA...TGCTGAGGTACAAAGGGCCGTCTTGTTTCCGTTCCAGCAGGCTGAGGGCACCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000508428.5
ENST00000510715.5
ENST00000511620.5
3UTR CAA 90 bp GTCCAGGGTGCCCTCAGCCTGCTGGAACGGAAACAAGACGGCCCTTaGTACCTCAGCATATATTGGAAGTGTTTTAGAGTTGGTGAGTTC +
Preference number: 2 (lower is better)
Translates to: VQGALSLLERKQDGP*YLSIYWKCFRVGEF
Trigger: GAACTCACCAACTCTAAAACACTTCCAATATATGCTGAGGTACAAAGGGCCGTCTTGTTTCCGTTCCAGCAGGCTGAGGGCACCCTGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000508428.5
ENST00000510715.5
ENST00000511620.5
3UTR-3UTR TCA 90 bp GATTCTCGCAGGGCCGGCTGCTATCTCAGATTTTCTAATCGGAGAAGGAGAGAGCCCATTCGTCCATCTTaGGGTGGACTAATCATGGAG +
Preference number: 2 (lower is better)
Translates to: DSRRAGCYLRFSNRRRREPIRPS*GGLIME
Trigger: CTCCATGATTAGTCCACCTCAAGATGGACGAATGGG...CTCTCTCCTTCTCCGATTAGAAAATCTGAGATAGCAGCCGGCCCTGCGAGAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506730.5
3UTR-3UTR TCA 90 bp AGGAAACACAACAGACACAGCGGGTGTTCTGAACGTGTCCAGGGTGCCCTCAGCAGGTCAACCATGGGATaGAACAGAAAGAAGCTGTTA +
Preference number: 2 (lower is better)
Translates to: RKHNRHSGCSERVQGALSRSTMG*NRKKLL
Trigger: TAACAGCTTCTTTCTGTTTCATCCCATGGTTGACCT...GCTGAGGGCACCCTGGACACGTTCAGAACACCCGCTGTGTCTGTTGTGTTTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511620.5
3UTR-3UTR GCA 90 bp CACTCTCCGGGCACAGGGGGCCATTCGTCCATCTTGAGGTGGACTAATCATGGATGTAGTTGTTCTATCTaGAGCACTGACTTCCTAAGG +
Preference number: 2 (lower is better)
Translates to: HSPGTGGHSSILRWTNHGCSCSI*STDFLR
Trigger: CCTTAGGAAGTCAGTGCTGCAGATAGAACAACTACA...TCCATGATTAGTCCACCTCAAGATGGACGAATGGCCCCCTGTGCCCGGAGAGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000508428.5
ENST00000510715.5
3UTR-3UTR GCA 90 bp TGGCAAAGAGGAAACACAACAGACACAGCGGGTGTTCTGAACGTGTCCAGGGTGGAGGACAGACGTCTATaGAGAAACATGGTGAACCTC +
Preference number: 2 (lower is better)
Translates to: WQRGNTTDTAGVLNVSRVEDRRL*RNMVNL
Trigger: GAGGTTCACCATGTTTCTGCATAGACGTCTGTCCTC...CACCCTGGACACGTTCAGAACACCCGCTGTGTCTGTTGTGTTTCCTCTTTGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508428.5
ENST00000511620.5
3UTR-3UTR CCA 90 bp TGGCCAAAATCCAGAACACTGACATCATCAAATGTGAGGACGTGGAGCAACAGGCATGGACTGCTCTGGTaGAGGATGAGGATGATGGGG +
Preference number: 2 (lower is better)
Translates to: WPKSRTLTSSNVRTWSNRHGLLW*RMRMMG
Trigger: CCCCATCATCCTCATCCTCCACCAGAGCAGTCCATG...CCTGTTGCTCCACGTCCTCACATTTGATGATGTCAGTGTTCTGGATTTTGGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382968.9
ENST00000433731.7
3UTR CAA 90 bp AAGACGGCCCTTTGTACCTCAGCATATATTGGAAGTGTTTTAGAGTaGGTGAGTTCCCCGTGCCTTCCAGAACTGAACGCTAGGAGGAGC +
Preference number: 2 (lower is better)
Translates to: KTALCTSAYIGSVLE*VSSPCLPELNARRS
Trigger: GCTCCTCCTAGCGTTCAGTTCTGGAAGGCACGGGGAACTCACCAACTCTAAAACACTTCCAATATATGCTGAGGTACAAAGGGCCGTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000508428.5
ENST00000510715.5
ENST00000511620.5
3UTR-3UTR TCA 90 bp TCGTCCATCTTGAGGTGGACTAATCATGGAGATTCTCGCAGGGCCGGCTGCTATTTCTATCTGCAGCACTaGCTTCCTAAGGGATTCTTC +
Preference number: 2 (lower is better)
Translates to: SSILRWTNHGDSRRAGCYFYLQH*LPKGFF
Trigger: GAAGAATCCCTTAGGAAGTCAGTGCTGCAGATAGAA...ATAGCAGCCGGCCCTGCGAGAATCTCCATGATTAGTCCACCTCAAGATGGACGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506730.5
ENST00000508428.5
ENST00000510715.5
3UTR-3UTR TCA 90 bp ACCTCAGCATATATTGGAAGTGTTTTAGAGTTGGTGAGTTCCCCGTGCCTTCCAGTGAACCTCTGGAAATaGCACACTCTCCGGGCACAG +
Preference number: 2 (lower is better)
Translates to: TSAYIGSVLELVSSPCLPVNLWK*HTLRAQ
Trigger: CTGTGCCCGGAGAGTGTGTCATTTCCAGAGGTTCAC...TGGAAGGCACGGGGAACTCACCAACTCTAAAACACTTCCAATATATGCTGAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000508428.5
ENST00000510715.5
ENST00000511620.5
3UTR-3UTR GCA 90 bp TGCCCTCAGCCTGCTGGAACGGAAACAAGACGGCCCTTTGTACCTCAGCATATATATGCTCATGAAGAATaGCTGGATATCTGCGTCGGT +
Preference number: 2 (lower is better)
Translates to: CPQPAGTETRRPFVPQHIYAHEE*LDICVG
Trigger: ACCGACGCAGATATCCAGGCATTCTTCATGAGCATA...TATATGCTGAGGTACAAAGGGCCGTCTTGTTTCCGTTCCAGCAGGCTGAGGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510715.5
3UTR-3UTR CCA 90 bp CCAAAATCCAGAACACTGACATCATCAAATGTGAGGACGTGGAGCAACAGGAACCATGGACTGCTCTGGTaGAGGATGAGGATGATGGGG +
Preference number: 2 (lower is better)
Translates to: PKSRTLTSSNVRTWSNRNHGLLW*RMRMMG
Trigger: CCCCATCATCCTCATCCTCCACCAGAGCAGTCCATG...GTTCCTGTTGCTCCACGTCCTCACATTTGATGATGTCAGTGTTCTGGATTTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382968.9
ENST00000433731.7
3UTR-3UTR TCA 90 bp ATGAAATGCAAAATAAAACAGCAAGATACCACTACATACCTATCAGCTGGCCAAGAGGTGGGGGAAGGATaGACAGGTGGCGCACAGAGG +
Preference number: 2 (lower is better)
Translates to: MKCKIKQQDTTTYLSAGQEVGEG*TGGAQR
Trigger: CCTCTGTGCGCCACCTGTTCATCCTTCCCCCACCTC...TTGGCCAGCTGATAGGTATGTAGTGGTATCTTGCTGTTTTATTTTGCATTTCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000382968.9
ENST00000433731.7
3UTR-3UTR GCA 90 bp GATTCTCGCAGGGCCGGCTGCTATCTCAGATTTTCTAATCGGAGAAGGAGAGAGTGTAGTTGTTCTATCTaGAGCACTGACTTCCTAAGG +
Preference number: 2 (lower is better)
Translates to: DSRRAGCYLRFSNRRRRECSCSI*STDFLR
Trigger: CCTTAGGAAGTCAGTGCTGCAGATAGAACAACTACA...CTCTCTCCTTCTCCGATTAGAAAATCTGAGATAGCAGCCGGCCCTGCGAGAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506730.5
ENST00000508428.5
3UTR-3UTR GCA 90 bp GGAGATTCTCGCAGGGCCGGCTGCTATCTCAGACTTTGTAGTTGTTCTATCTGCTGTAGTTGTTCTATCTaGAGCACTGACTTCCTAAGG +
Preference number: 2 (lower is better)
Translates to: GDSRRAGCYLRLCSCSICCSCSI*STDFLR
Trigger: CCTTAGGAAGTCAGTGCTGCAGATAGAACAACTACA...GCAGATAGAACAACTACAAAGTCTGAGATAGCAGCCGGCCCTGCGAGAATCTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510715.5
3UTR-3UTR GCA 90 bp TTGTACCTCAGCATATATTGGAAGTGTTTTAGAGTTGGTGAGTTCCCCGTGCCTTCTCGCAGGGCCGGCTaGTATCTCAGACTTTGTAGT +
Preference number: 2 (lower is better)
Translates to: LYLSIYWKCFRVGEFPVPSRRAG*YLRLCS
Trigger: ACTACAAAGTCTGAGATAGCAGCCGGCCCTGCGAGA...AGGCACGGGGAACTCACCAACTCTAAAACACTTCCAATATATGCTGAGGTACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510715.5
3UTR-3UTR CCA 90 bp AGAACACTGACATCATCAAATGTGAGGACGTGGAGCAACAGGAACTCTCATTCGACACATGGACTGCTCTaGTGGAGGATGAGGATGATG +
Preference number: 2 (lower is better)
Translates to: RTLTSSNVRTWSNRNSHSTHGLL*WRMRMM
Trigger: CATCATCCTCATCCTCCACCAGAGCAGTCCATGTGT...CGAATGAGAGTTCCTGTTGCTCCACGTCCTCACATTTGATGATGTCAGTGTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382968.9
ENST00000433731.7
3UTR-3UTR CCA 90 bp GGAGCAGCCAGTGAGGACAGACGTCTATGCAGAAACATGGTGAACCTCTGGAAATCGTCCATCTTGAGGTaGACTAATCATGGAGATTCT +
Preference number: 2 (lower is better)
Translates to: GAASEDRRLCRNMVNLWKSSILR*TNHGDS
Trigger: AGAATCTCCATGATTAGTCCACCTCAAGATGGACGA...TTTCCAGAGGTTCACCATGTTTCTGCATAGACGTCTGTCCTCACTGGCTGCTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000508428.5
ENST00000510715.5
ENST00000511620.5
3UTR-3UTR CCA 90 bp GGCTGCTATCTCAGACTTTGTAGTTGTTCTATCTGCAGCACTGACTTCCTAAGGCTCATGAAGAATGCCTaGATATCTGCGTCGGTAGCG +
Preference number: 2 (lower is better)
Translates to: GCYLRLCSCSICSTDFLRLMKNA*ISASVA
Trigger: CGCTACCGACGCAGATATCCAGGCATTCTTCATGAG...CCTTAGGAAGTCAGTGCTGCAGATAGAACAACTACAAAGTCTGAGATAGCAGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510715.5
3UTR-3UTR TCA 90 bp ATGAAATGCAAAATAAAACAGCAAGATACCACTACATACCTATCAGCTGGCCAAACACAGCGGGTGTTCTaGACGTGTCCAGGGTGCCCT +
Preference number: 2 (lower is better)
Translates to: MKCKIKQQDTTTYLSAGQTQRVF*TCPGCP
Trigger: AGGGCACCCTGGACACGTTCAGAACACCCGCTGTGT...TTGGCCAGCTGATAGGTATGTAGTGGTATCTTGCTGTTTTATTTTGCATTTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382968.9
3UTR-3UTR TCA 90 bp CTAATCATGGAGATTCTCGCAGGGCCGGCTGCTATCTCAGATTTTCTAATCGGATTCTATCTGCAGCACTaGCTTCCTAAGGGATTCTTC +
Preference number: 2 (lower is better)
Translates to: LIMEILAGPAAISDFLIGFYLQH*LPKGFF
Trigger: GAAGAATCCCTTAGGAAGTCAGTGCTGCAGATAGAA...TCCGATTAGAAAATCTGAGATAGCAGCCGGCCCTGCGAGAATCTCCATGATTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506730.5
ENST00000508428.5
3UTR-3UTR GCA 90 bp ACCTCAGCATATATTGGAAGTGTTTTAGAGTTGGTGAGTTCCCCGTGCCTTCCAGAGGACAGACGTCTATaGAGAAACATGGTGAACCTC +
Preference number: 2 (lower is better)
Translates to: TSAYIGSVLELVSSPCLPEDRRL*RNMVNL
Trigger: GAGGTTCACCATGTTTCTGCATAGACGTCTGTCCTC...TGGAAGGCACGGGGAACTCACCAACTCTAAAACACTTCCAATATATGCTGAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000508428.5
ENST00000510715.5
ENST00000511620.5
3UTR-3UTR CCA 90 bp CCACTACATACCTATCAGCTGGCCAAAATCCAGAACACTGACATCATCAAATGTACACATGGACTGCTCTaGTGGAGGATGAGGATGATG +
Preference number: 2 (lower is better)
Translates to: PLHTYQLAKIQNTDIIKCTHGLL*WRMRMM
Trigger: CATCATCCTCATCCTCCACCAGAGCAGTCCATGTGT...ACATTTGATGATGTCAGTGTTCTGGATTTTGGCCAGCTGATAGGTATGTAGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382968.9
ENST00000433731.7
3UTR-3UTR CCA 90 bp TGGCCAAAATCCAGAACACTGACATCATCAAATGTGAGGACGTGGAGCAACAGGATCAGTTTTAACACATaGACTGCTCTGGTGGAGGAT +
Preference number: 2 (lower is better)
Translates to: WPKSRTLTSSNVRTWSNRISFNT*TALVED
Trigger: ATCCTCCACCAGAGCAGTCCATGTGTTAAAACTGAT...CCTGTTGCTCCACGTCCTCACATTTGATGATGTCAGTGTTCTGGATTTTGGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382968.9
ENST00000433731.7
3UTR-3UTR TCA 90 bp GGCTGCTATCTCAGATTTTCTAATCGGAGAAGGAGAGAGATCAACTTCCATCGATTCTATCTGCAGCACTaGCTTCCTAAGGGATTCTTC +
Preference number: 2 (lower is better)
Translates to: GCYLRFSNRRRREINFHRFYLQH*LPKGFF
Trigger: GAAGAATCCCTTAGGAAGTCAGTGCTGCAGATAGAA...TCGATGGAAGTTGATCTCTCTCCTTCTCCGATTAGAAAATCTGAGATAGCAGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506730.5
ENST00000508428.5
3UTR-3UTR GCA 90 bp AGAACACTGACATCATCAAATGTGAGGACGTGGAGCAACAGGAACTCTCATTCGAAAAGGTTAATATCCTaGACACTGAGGGCTTCCACA +
Preference number: 2 (lower is better)
Translates to: RTLTSSNVRTWSNRNSHSKRLIS*TLRAST
Trigger: TGTGGAAGCCCTCAGTGTGCAGGATATTAACCTTTT...CGAATGAGAGTTCCTGTTGCTCCACGTCCTCACATTTGATGATGTCAGTGTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382968.9
ENST00000433731.7
3UTR-3UTR CCA 90 bp ATCAGCTGGCCAAAATCCAGAACACTGACATCATCAAATGTGAGGACGTGGAGCGAGTCATGGTGTATATaGGAAATCTGTACCTTCCTT +
Preference number: 2 (lower is better)
Translates to: ISWPKSRTLTSSNVRTWSESWCI*EICTFL
Trigger: AAGGAAGGTACAGATTTCCCATATACACCATGACTC...GCTCCACGTCCTCACATTTGATGATGTCAGTGTTCTGGATTTTGGCCAGCTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382968.9
ENST00000433731.7
3UTR-3UTR CCA 90 bp AGAACACTGACATCATCAAATGTGAGGACGTGGAGCAACAGGAACTCTCATTCGAGGATTTTTAGGGTGTaGCACTATTCCATATGCTGC +
Preference number: 2 (lower is better)
Translates to: RTLTSSNVRTWSNRNSHSRIFRV*HYSICC
Trigger: GCAGCATATGGAATAGTGCCACACCCTAAAAATCCT...CGAATGAGAGTTCCTGTTGCTCCACGTCCTCACATTTGATGATGTCAGTGTTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000382968.9
ENST00000433731.7
3UTR-3UTR CCA 90 bp AGTTGTTCTATCTGCAGCACTGACTTCCTAAGGGATTCTTCCAACCTAGAAATCTCTGGGAGGTTTCCCTaGAGTACTTCTTACACAGAC +
Preference number: 2 (lower is better)
Translates to: SCSICSTDFLRDSSNLEISGRFP*STSYTD
Trigger: GTCTGTGTAAGAAGTACTCCAGGGAAACCTCCCAGA...GATTTCTAGGTTGGAAGAATCCCTTAGGAAGTCAGTGCTGCAGATAGAACAACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510715.5
3UTR CAA 90 bp AACTCTCATTCGTTGCTAGTGGGAATGCGAAAAGCTGCTGCCACTTaGGAAGGTAGTTTGGCAATTTCTTTCAAAACTAAACACCCTCTC +
Preference number: 2 (lower is better)
Translates to: NSHSLLVGMRKAAAT*EGSLAISFKTKHPL
Trigger: GAGAGGGTGTTTAGTTTTGAAAGAAATTGCCAAACTACCTTCCAAAGTGGCAGCAGCTTTTCGCATTCCCACTAGCAACGAATGAGAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382968.9
ENST00000433731.7
3UTR-3UTR TCA 90 bp CTTTCAAAACTAAACACCCTCTCACCATCTGATCCAGCATTCACACTCCTTAGTAACTCCAGGAGAGTCTaGAAAAGGGACCGTAAAAAG +
Preference number: 2 (lower is better)
Translates to: LSKLNTLSPSDPAFTLLSNSRRV*KRDRKK
Trigger: CTTTTTACGGTCCCTTTTTCAGACTCTCCTGGAGTT...ACTAAGGAGTGTGAATGCTGGATCAGATGGTGAGAGGGTGTTTAGTTTTGAAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000382968.9
ENST00000433731.7
3UTR-3UTR CCA 90 bp TCACCATCTGATCCAGCATTCACACTCCTTAGTATTTACCCAAAGGAGCTGAAAGCGTGTGTGGAGTCATaGTGTATATGGGAAATCTGT +
Preference number: 2 (lower is better)
Translates to: SPSDPAFTLLSIYPKELKACVES*CIWEIC
Trigger: ACAGATTTCCCATATACACCATGACTCCACACACGC...TTTCAGCTCCTTTGGGTAAATACTAAGGAGTGTGAATGCTGGATCAGATGGTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382968.9
ENST00000433731.7
3UTR-3UTR CCA 90 bp GAAAGGAGTCAATCTGAGAAGCCACATACTGTACAATTCCAACTCCAGGAGAGTATCAGTTTTAACACATaGACTGCTCTGGTGGAGGAT +
Preference number: 2 (lower is better)
Translates to: ERSQSEKPHTVQFQLQESISFNT*TALVED
Trigger: ATCCTCCACCAGAGCAGTCCATGTGTTAAAACTGAT...ACTCTCCTGGAGTTGGAATTGTACAGTATGTGGCTTCTCAGATTGACTCCTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382968.9
ENST00000433731.7
3UTR-3UTR CCA 90 bp TGGAAGCAACCAAGATGCCCTTCAGTAGGTGAATGGATGAACTATGATACATCCAGGATTTTTAGGGTGTaGCACTATTCCATATGCTGC +
Preference number: 2 (lower is better)
Translates to: WKQPRCPSVGEWMNYDTSRIFRV*HYSICC
Trigger: GCAGCATATGGAATAGTGCCACACCCTAAAAATCCT...GGATGTATCATAGTTCATCCATTCACCTACTGAAGGGCATCTTGGTTGCTTCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000382968.9
ENST00000433731.7
3UTR-3UTR GCA 90 bp CTTTCAAAACTAAACACCCTCTCACCATCTGATCCAGCATTCACACTCCTTAGTAAAAGGTTAATATCCTaGACACTGAGGGCTTCCACA +
Preference number: 2 (lower is better)
Translates to: LSKLNTLSPSDPAFTLLSKRLIS*TLRAST
Trigger: TGTGGAAGCCCTCAGTGTGCAGGATATTAACCTTTT...ACTAAGGAGTGTGAATGCTGGATCAGATGGTGAGAGGGTGTTTAGTTTTGAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382968.9
ENST00000433731.7
3UTR-3UTR CCA 90 bp CTTTCAAAACTAAACACCCTCTCACCATCTGATCCAGCATTCACACTCCTTAGTGTAAACCATGGACGTTaGGTGATAATGATGTATTCA +
Preference number: 2 (lower is better)
Translates to: LSKLNTLSPSDPAFTLLSVNHGR*VIMMYS
Trigger: TGAATACATCATTATCACCCAACGTCCATGGTTTAC...ACTAAGGAGTGTGAATGCTGGATCAGATGGTGAGAGGGTGTTTAGTTTTGAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382968.9
ENST00000433731.7
3UTR-3UTR TCA 90 bp ATGAAATGCAAAATAAAACAGCAAGATACCACTACATACCTATCAGCTGGCCAATTTACCCAAAGGAGCTaGAAACATGTCTACACAAAA +
Preference number: 2 (lower is better)
Translates to: MKCKIKQQDTTTYLSAGQFTQRS*KHVYTK
Trigger: TTTTGTGTAGACATGTTTTCAGCTCCTTTGGGTAAA...TTGGCCAGCTGATAGGTATGTAGTGGTATCTTGCTGTTTTATTTTGCATTTCAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382968.9
ENST00000433731.7
3UTR TCA 72 bp GGGCCCAGGGAGGAGACGCTGCCCATTCGTCCATCTTaGGGTGGACTAATCATGGAGATTCTCGCAGGGCCG +
Preference number: 3 (lower is better)
Translates to: GPREETLPIRPS*GGLIMEILAGP
Trigger: CGGCCCTGCGAGAATCTCCATGATTAGTCCACCTCAAGATGGACGAATGGGCAGCGTCTCCTCCCTGGGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506730.5
3UTR CCA 72 bp TCTCCGGGCACAGGGGGCCATTCGTCCATCTTGAGGTaGACTAATCATGGAGATTCTCGCAGGGCCGGCTGC +
Preference number: 3 (lower is better)
Translates to: SPGTGGHSSILR*TNHGDSRRAGC
Trigger: GCAGCCGGCCCTGCGAGAATCTCCATGATTAGTCCACCTCAAGATGGACGAATGGCCCCCTGTGCCCGGAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000508428.5
ENST00000510715.5
3UTR TCA 72 bp CACACTCTCCGGGCACAGGGGGCCATTCGTCCATCTTaGGGTGGACTAATCATGGAGATTCTCGCAGGGCCG +
Preference number: 3 (lower is better)
Translates to: HTLRAQGAIRPS*GGLIMEILAGP
Trigger: CGGCCCTGCGAGAATCTCCATGATTAGTCCACCTCAAGATGGACGAATGGCCCCCTGTGCCCGGAGAGTGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000508428.5
ENST00000510715.5
3UTR CCA 72 bp CAGGGAGGAGACGCTGCCCATTCGTCCATCTTGAGGTaGACTAATCATGGAGATTCTCGCAGGGCCGGCTGC +
Preference number: 3 (lower is better)
Translates to: QGGDAAHSSILR*TNHGDSRRAGC
Trigger: GCAGCCGGCCCTGCGAGAATCTCCATGATTAGTCCACCTCAAGATGGACGAATGGGCAGCGTCTCCTCCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506730.5
3UTR TCA 72 bp GGCAAAGAGGAAACACAACAGACACAGCGGGTGTTCTaGACGTGTCCAGGGTGCCCTCAGCCTGCTGGAACG +
Preference number: 3 (lower is better)
Translates to: GKEETQQTQRVF*TCPGCPQPAGT
Trigger: CGTTCCAGCAGGCTGAGGGCACCCTGGACACGTTCAGAACACCCGCTGTGTCTGTTGTGTTTCCTCTTTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382968.9
ENST00000508428.5
ENST00000511620.5
3UTR TCA 72 bp ACTTCCATCGACTCCAGTCTGTCGGGGGCTGATGAGTaGGGTGGCAGCAGGCATCCGTGTGGTTTTGTTGAA +
Preference number: 3 (lower is better)
Translates to: TSIDSSLSGADE*GGSRHPCGFVE
Trigger: TTCAACAAAACCACACGGATGCCTGCTGCCACCTCACTCATCAGCCCCCGACAGACTGGAGTCGATGGAAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000506730.5
3UTR TCA 72 bp CAGCCAGTGAGGACAGACGTCTATGCAGAAACATGGTaGACCTCTGGAAATGACACACTCTCCGGGCACAGG +
Preference number: 3 (lower is better)
Translates to: QPVRTDVYAETW*TSGNDTLSGHR
Trigger: CCTGTGCCCGGAGAGTGTGTCATTTCCAGAGGTTCACCATGTTTCTGCATAGACGTCTGTCCTCACTGGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000508428.5
ENST00000510715.5
ENST00000511620.5
3UTR GCA 72 bp CTGCTCTGGTGGAGGATGAGGATGATGGGGGAGCTGTaGGTGTGTGGAGTCATGGTGTATATGGGAAATCTG +
Preference number: 3 (lower is better)
Translates to: LLWWRMRMMGEL*VCGVMVYMGNL
Trigger: CAGATTTCCCATATACACCATGACTCCACACACGCACAGCTCCCCCATCATCCTCATCCTCCACCAGAGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000382968.9
ENST00000433731.7
3UTR TCA 72 bp TGCCTTCCAGAACTGAACGCTAGGAGGAGCAGCCAGTaGGGACAGACGTCTATGCAGAAACATGGTGAACCT +
Preference number: 3 (lower is better)
Translates to: CLPELNARRSSQ*GQTSMQKHGEP
Trigger: AGGTTCACCATGTTTCTGCATAGACGTCTGTCCTCACTGGCTGCTCCTCCTAGCGTTCAGTTCTGGAAGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000508428.5
ENST00000510715.5
ENST00000511620.5
3UTR CCA 72 bp GTGGAGGATGAGGATGATGGGGGAGCTGTGCGTGTGTaGAGTCATGGTGTATATGGGAAATCTGTACCTTCC +
Preference number: 3 (lower is better)
Translates to: VEDEDDGGAVRV*SHGVYGKSVPS
Trigger: GGAAGGTACAGATTTCCCATATACACCATGACTCCACACACGCACAGCTCCCCCATCATCCTCATCCTCCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000382968.9
ENST00000433731.7
3UTR-3UTR CAA 90 bp TGCCCTCAGCCTGCTGGAACGGAAACAAGACGGCCCTTTGTACCTCAGCATATACCCCATTCGTCCATCTaGAGGTGGACTAATCATGGA +
Preference number: 3 (lower is better)
Translates to: CPQPAGTETRRPFVPQHIPHSSI*RWTNHG
Trigger: TCCATGATTAGTCCACCTCAAGATGGACGAATGGGG...TATATGCTGAGGTACAAAGGGCCGTCTTGTTTCCGTTCCAGCAGGCTGAGGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511620.5
3UTR-3UTR CAA 90 bp ACACACTCTCCGGGCACAGGGGGCCATTCGTCCATCTTGAGGTGGACTAATCATAAACAAGACGGCCCTTaGTACCTCAGCATATATTGG +
Preference number: 3 (lower is better)
Translates to: THSPGTGGHSSILRWTNHKQDGP*YLSIYW
Trigger: CCAATATATGCTGAGGTACAAAGGGCCGTCTTGTTT...ATGATTAGTCCACCTCAAGATGGACGAATGGCCCCCTGTGCCCGGAGAGTGTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000508428.5
ENST00000510715.5
3UTR TCA 72 bp AAAGAAGCTGTTAGATGTGGCCCCATTCGTCCATCTTaGGGTGGACTAATCATGGAGATTCTCGCAGGGCCG +
Preference number: 3 (lower is better)
Translates to: KEAVRCGPIRPS*GGLIMEILAGP
Trigger: CGGCCCTGCGAGAATCTCCATGATTAGTCCACCTCAAGATGGACGAATGGGGCCACATCTAACAGCTTCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511620.5
3UTR CCA 72 bp GTAGGATCATCAGTTTTAACACATGGACTGCTCTGGTaGAGGATGAGGATGATGGGGGAGCTGTGCGTGTGT +
Preference number: 3 (lower is better)
Translates to: VGSSVLTHGLLW*RMRMMGELCVC
Trigger: ACACACGCACAGCTCCCCCATCATCCTCATCCTCCACCAGAGCAGTCCATGTGTTAAAACTGATGATCCTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000382968.9
ENST00000433731.7
3UTR CCA 72 bp CAAGTAGGATCATCAGTTTTAACACATGGACTGCTCTaGTGGAGGATGAGGATGATGGGGGAGCTGTGCGTG +
Preference number: 3 (lower is better)
Translates to: QVGSSVLTHGLL*WRMRMMGELCV
Trigger: CACGCACAGCTCCCCCATCATCCTCATCCTCCACCAGAGCAGTCCATGTGTTAAAACTGATGATCCTACTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000382968.9
ENST00000433731.7
3UTR GCA 72 bp TATATTGGAAGTGTTTTAGAGTTGGTGAGTTCCCCGTaGCTTCCAGAACTGAACGCTAGGAGGAGCAGCCAG +
Preference number: 3 (lower is better)
Translates to: YIGSVLELVSSP*LPELNARRSSQ
Trigger: CTGGCTGCTCCTCCTAGCGTTCAGTTCTGGAAGGCACGGGGAACTCACCAACTCTAAAACACTTCCAATATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000508428.5
ENST00000510715.5
ENST00000511620.5
3UTR GCA 72 bp AGGTGGACTAATCATGGAGATTCTCGCAGGGCCGGCTaGTATCTCAGACTTTGTAGTTGTTCTATCTGCAGC +
Preference number: 3 (lower is better)
Translates to: RWTNHGDSRRAG*YLRLCSCSICS
Trigger: GCTGCAGATAGAACAACTACAAAGTCTGAGATAGCAGCCGGCCCTGCGAGAATCTCCATGATTAGTCCACCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510715.5
3UTR-3UTR CAA 90 bp GGAAGTGTTTTAGAGTTGGTGAGTTCCCCGTGCCTTCCAGAACTGAACGCTAGGAAACAAGACGGCCCTTaGTACCTCAGCATATATTGG +
Preference number: 3 (lower is better)
Translates to: GSVLELVSSPCLPELNARKQDGP*YLSIYW
Trigger: CCAATATATGCTGAGGTACAAAGGGCCGTCTTGTTT...CCTAGCGTTCAGTTCTGGAAGGCACGGGGAACTCACCAACTCTAAAACACTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000508428.5
ENST00000510715.5
ENST00000511620.5
3UTR CCA 72 bp CGGAAACAAGACGGCCCTTTGTACCTCAGCATATATTaGAAGTGTTTTAGAGTTGGTGAGTTCCCCGTGCCT +
Preference number: 3 (lower is better)
Translates to: RKQDGPLYLSIY*KCFRVGEFPVP
Trigger: AGGCACGGGGAACTCACCAACTCTAAAACACTTCCAATATATGCTGAGGTACAAAGGGCCGTCTTGTTTCCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000508428.5
ENST00000510715.5
ENST00000511620.5
3UTR-3UTR CAA 90 bp ACCTCAGCATATATTGGAAGTGTTTTAGAGTTGGTGAGTTCCCCGTGCCTTCCAGGCCATTCGTCCATCTaGAGGTGGACTAATCATGGA +
Preference number: 3 (lower is better)
Translates to: TSAYIGSVLELVSSPCLPGHSSI*RWTNHG
Trigger: TCCATGATTAGTCCACCTCAAGATGGACGAATGGCC...TGGAAGGCACGGGGAACTCACCAACTCTAAAACACTTCCAATATATGCTGAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000508428.5
ENST00000510715.5
3UTR-3UTR CAA 90 bp TCCATCTTGAGGTGGACTAATCATGGAGATTCTCGCAGGGCCGGCTGCTATCTCGGCATCCGTGTGGTTTaGTTGAAACTGAACTTTTTA +
Preference number: 3 (lower is better)
Translates to: SILRWTNHGDSRRAGCYLGIRVV*LKLNFL
Trigger: TAAAAAGTTCAGTTTCAACAAAACCACACGGATGCC...GAGATAGCAGCCGGCCCTGCGAGAATCTCCATGATTAGTCCACCTCAAGATGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000506730.5
3UTR GCA 72 bp GCCGGCTGCTATCTCAGACTTTGTAGTTGTTCTATCTaGAGCACTGACTTCCTAAGGGATTCTTCCAACCTA +
Preference number: 3 (lower is better)
Translates to: AGCYLRLCSCSI*STDFLRDSSNL
Trigger: TAGGTTGGAAGAATCCCTTAGGAAGTCAGTGCTGCAGATAGAACAACTACAAAGTCTGAGATAGCAGCCGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510715.5
3UTR-3UTR CAA 90 bp AGAACACTGACATCATCAAATGTGAGGACGTGGAGCAACAGGAACTCTCATTCGAAACAAGACGGCCCTTaGTACCTCAGCATATATTGG +
Preference number: 3 (lower is better)
Translates to: RTLTSSNVRTWSNRNSHSKQDGP*YLSIYW
Trigger: CCAATATATGCTGAGGTACAAAGGGCCGTCTTGTTT...CGAATGAGAGTTCCTGTTGCTCCACGTCCTCACATTTGATGATGTCAGTGTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382968.9
3UTR-3UTR CAA 90 bp ATTGGAAGTGTTTTAGAGTTGGTGAGTTCCCCGTGCCTTCCAGAACTGAACGCTTCCATCGACTCCAGTTaGAAACTGAACTTTTTATTG +
Preference number: 3 (lower is better)
Translates to: IGSVLELVSSPCLPELNASIDSS*KLNFLL
Trigger: CAATAAAAAGTTCAGTTTCAAACTGGAGTCGATGGA...AGCGTTCAGTTCTGGAAGGCACGGGGAACTCACCAACTCTAAAACACTTCCAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000508428.5
3UTR CCA 72 bp GAATGCGAAAAGCTGCTGCCACTTTGGAAGGTAGTTTaGCAATTTCTTTCAAAACTAAACACCCTCTCACCA +
Preference number: 3 (lower is better)
Translates to: ECEKLLPLWKVV*QFLSKLNTLSP
Trigger: TGGTGAGAGGGTGTTTAGTTTTGAAAGAAATTGCCAAACTACCTTCCAAAGTGGCAGCAGCTTTTCGCATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382968.9
ENST00000433731.7
3UTR GCA 72 bp TGTTGTGATGATCTCATACTTTGTAGTTGTTCTATCTaGAGCACTGACTTCCTAAGGGATTCTTCCAACCTA +
Preference number: 3 (lower is better)
Translates to: CCDDLILCSCSI*STDFLRDSSNL
Trigger: TAGGTTGGAAGAATCCCTTAGGAAGTCAGTGCTGCAGATAGAACAACTACAAAGTATGAGATCATCACAACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506730.5
ENST00000508428.5
3UTR CCA 72 bp ACACCTAGAGTGAACCCTAATGTAAACCATGGACGTTaGGTGATAATGATGTATTCAAGTAGGATCATCAGT +
Preference number: 3 (lower is better)
Translates to: TPRVNPNVNHGR*VIMMYSSRIIS
Trigger: ACTGATGATCCTACTTGAATACATCATTATCACCCAACGTCCATGGTTTACATTAGGGTTCACTCTAGGTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382968.9
ENST00000433731.7
CDS-3UTR GCA 90 bp GTGTCCAGGGTGCCCTCAGCCTGCTGGAACGGAAACAAGACGGCCCTTTGTACCACACCCAGTTGGCCATaGCAGGCGGGCGACCGCAGC +
Preference number: 4 (lower is better)
Translates to: VSRVPSACWNGNKTALCTTPSWP*QAGDRS
Trigger: GCTGCGGTCGCCCGCCTGGCATGGCCAACTGGGTGT...GGTACAAAGGGCCGTCTTGTTTCCGTTCCAGCAGGCTGAGGGCACCCTGGACAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382968.9
ENST00000508428.5
ENST00000510715.5
ENST00000511620.5
CDS-3UTR GCA 90 bp TCGACTCCAGTCTGTCGGGGGCTGATGAGTGAGGTGGCAGCAGGCATCCGTGTGGCGTCGCAGTACACGTaGCCGCAGTTGGTGAGGCTG +
Preference number: 4 (lower is better)
Translates to: STPVCRGLMSEVAAGIRVASQYT*PQLVRL
Trigger: CAGCCTCACCAACTGCGGGCACGTGTACTGCGACGC...CACACGGATGCCTGCTGCCACCTCACTCATCAGCCCCCGACAGACTGGAGTCGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000506730.5
CDS-3UTR TCA 90 bp AGGGTGCCCTCAGCCTGCTGGAACGGAAACAAGACGGCCCTTTGTACCTCAGCAGAGGTGGGGGAAGGATaGACAGGTGGCGCACAGAGG +
Preference number: 4 (lower is better)
Translates to: RVPSACWNGNKTALCTSAEVGEG*TGGAQR
Trigger: CCTCTGTGCGCCACCTGTTCATCCTTCCCCCACCTC...TGCTGAGGTACAAAGGGCCGTCTTGTTTCCGTTCCAGCAGGCTGAGGGCACCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000382968.9
CDS-3UTR GCA 90 bp TGCCCTCAGCCTGCTGGAACGGAAACAAGACGGCCCTTTGTACCTCAGCATATAACACCCAGTTGGCCATaGCAGGCGGGCGACCGCAGC +
Preference number: 4 (lower is better)
Translates to: CPQPAGTETRRPFVPQHITPSWP*QAGDRS
Trigger: GCTGCGGTCGCCCGCCTGGCATGGCCAACTGGGTGT...TATATGCTGAGGTACAAAGGGCCGTCTTGTTTCCGTTCCAGCAGGCTGAGGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382968.9
ENST00000508428.5
ENST00000510715.5
ENST00000511620.5
CDS-3UTR GCA 90 bp TCGTCCATCTTGAGGTGGACTAATCATGGAGATTCTCGCAGGGCCGGCTGCTATACACCCAGTTGGCCATaGCAGGCGGGCGACCGCAGC +
Preference number: 4 (lower is better)
Translates to: SSILRWTNHGDSRRAGCYTPSWP*QAGDRS
Trigger: GCTGCGGTCGCCCGCCTGGCATGGCCAACTGGGTGT...ATAGCAGCCGGCCCTGCGAGAATCTCCATGATTAGTCCACCTCAAGATGGACGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506730.5
ENST00000508428.5
ENST00000510715.5
CDS-3UTR GCA 90 bp GTGTCCAGGGTGCCCTCAGCCTGCTGGAACGGAAACAAGACGGCCCTTTGTACCAGGGTGCCCTCAGCCTaGTGGAACGGAAACAAGACG +
Preference number: 4 (lower is better)
Translates to: VSRVPSACWNGNKTALCTRVPSA*WNGNKT
Trigger: CGTCTTGTTTCCGTTCCAGCAGGCTGAGGGCACCCT...GGTACAAAGGGCCGTCTTGTTTCCGTTCCAGCAGGCTGAGGGCACCCTGGACAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382968.9
ENST00000508428.5
ENST00000510715.5
ENST00000511620.5
CDS-3UTR TCA 90 bp GGTGCCCTCAGCCTGCTGGAACGGAAACAAGACGGCCCTTTGTACCTCAGCATACGTGCCTTCCAGAACTaGACGCTAGGAGGAGCAGCC +
Preference number: 4 (lower is better)
Translates to: GALSLLERKQDGPLYLSIRAFQN*TLGGAA
Trigger: GGCTGCTCCTCCTAGCGTTCAGTTCTGGAAGGCACG...TATGCTGAGGTACAAAGGGCCGTCTTGTTTCCGTTCCAGCAGGCTGAGGGCACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382968.9
ENST00000508428.5
ENST00000510715.5
ENST00000511620.5
CDS-3UTR TCA 90 bp AGGAAACACAACAGACACAGCGGGTGTTCTGAACGTGTCCAGGGTGCCCTCAGCACACAGCGGGTGTTCTaGACGTGTCCAGGGTGCCCT +
Preference number: 4 (lower is better)
Translates to: RKHNRHSGCSERVQGALSTQRVF*TCPGCP
Trigger: AGGGCACCCTGGACACGTTCAGAACACCCGCTGTGT...GCTGAGGGCACCCTGGACACGTTCAGAACACCCGCTGTGTCTGTTGTGTTTCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382968.9
ENST00000508428.5
ENST00000511620.5
CDS-3UTR GCA 90 bp ACACACTCTCCGGGCACAGGGGGCCATTCGTCCATCTTGAGGTGGACTAATCATGCGTCGCAGTACACGTaGCCGCAGTTGGTGAGGCTG +
Preference number: 4 (lower is better)
Translates to: THSPGTGGHSSILRWTNHASQYT*PQLVRL
Trigger: CAGCCTCACCAACTGCGGGCACGTGTACTGCGACGC...ATGATTAGTCCACCTCAAGATGGACGAATGGCCCCCTGTGCCCGGAGAGTGTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000508428.5
ENST00000510715.5
CDS-3UTR GCA 90 bp AGGGTGCCCTCAGCCTGCTGGAACGGAAACAAGACGGCCCTTTGTACCTCAGCAAGGGTGCCCTCAGCCTaGTGGAACGGAAACAAGACG +
Preference number: 4 (lower is better)
Translates to: RVPSACWNGNKTALCTSARVPSA*WNGNKT
Trigger: CGTCTTGTTTCCGTTCCAGCAGGCTGAGGGCACCCT...TGCTGAGGTACAAAGGGCCGTCTTGTTTCCGTTCCAGCAGGCTGAGGGCACCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382968.9
ENST00000508428.5
ENST00000510715.5
ENST00000511620.5
CDS-3UTR GCA 90 bp GGTGCCCTCAGCCTGCTGGAACGGAAACAAGACGGCCCTTTGTACCTCAGCATAATCTGCGTCGGTCTTTaGCGAGGCAGGCGTCGCAGT +
Preference number: 4 (lower is better)
Translates to: GALSLLERKQDGPLYLSIICVGL*RGRRRS
Trigger: ACTGCGACGCCTGCCTCGGCAAAGACCGACGCAGAT...TATGCTGAGGTACAAAGGGCCGTCTTGTTTCCGTTCCAGCAGGCTGAGGGCACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508428.5
CDS-3UTR TCA 90 bp TGTCCAGGGTGCCCTCAGCCTGCTGGAACGGAAACAAGACGGCCCTTTGTACCTGTGAACCTCTGGAAATaGCACACTCTCCGGGCACAG +
Preference number: 4 (lower is better)
Translates to: CPGCPQPAGTETRRPFVPVNLWK*HTLRAQ
Trigger: CTGTGCCCGGAGAGTGTGTCATTTCCAGAGGTTCAC...AGGTACAAAGGGCCGTCTTGTTTCCGTTCCAGCAGGCTGAGGGCACCCTGGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382968.9
ENST00000508428.5
ENST00000510715.5
ENST00000511620.5
CDS-3UTR TCA 90 bp AGGAAACACAACAGACACAGCGGGTGTTCTGAACGTGTCCAGGGTGCCCTCAGCAGGAGGAGCAGCCAGTaGGGACAGACGTCTATGCAG +
Preference number: 4 (lower is better)
Translates to: RKHNRHSGCSERVQGALSRRSSQ*GQTSMQ
Trigger: CTGCATAGACGTCTGTCCTCACTGGCTGCTCCTCCT...GCTGAGGGCACCCTGGACACGTTCAGAACACCCGCTGTGTCTGTTGTGTTTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382968.9
ENST00000508428.5
ENST00000511620.5
CDS-3UTR TCA 90 bp GCAAAGAGGAAACACAACAGACACAGCGGGTGTTCTGAACGTGTCCAGGGTGCCCGTGCCTTCCAGAACTaGACGCTAGGAGGAGCAGCC +
Preference number: 4 (lower is better)
Translates to: AKRKHNRHSGCSERVQGARAFQN*TLGGAA
Trigger: GGCTGCTCCTCCTAGCGTTCAGTTCTGGAAGGCACG...GGCACCCTGGACACGTTCAGAACACCCGCTGTGTCTGTTGTGTTTCCTCTTTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382968.9
ENST00000508428.5
ENST00000511620.5
CDS-3UTR TCA 90 bp GTGCCCTCAGCCTGCTGGAACGGAAACAAGACGGCCCTTTGTACCTCAGCATATGGCCTTTGCTGCGTCTaGCGTCATCATGGCAGAGGG +
Preference number: 4 (lower is better)
Translates to: VPSACWNGNKTALCTSAYGLCCV*RHHGRG
Trigger: CCCTCTGCCATGATGACGTCAGACGCAGCAAAGGCC...ATATGCTGAGGTACAAAGGGCCGTCTTGTTTCCGTTCCAGCAGGCTGAGGGCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510715.5
CDS-3UTR GCA 90 bp GGTGCCCTCAGCCTGCTGGAACGGAAACAAGACGGCCCTTTGTACCTCAGCATAAGGGTGCCCTCAGCCTaGTGGAACGGAAACAAGACG +
Preference number: 4 (lower is better)
Translates to: GALSLLERKQDGPLYLSIRVPSA*WNGNKT
Trigger: CGTCTTGTTTCCGTTCCAGCAGGCTGAGGGCACCCT...TATGCTGAGGTACAAAGGGCCGTCTTGTTTCCGTTCCAGCAGGCTGAGGGCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382968.9
ENST00000508428.5
ENST00000510715.5
ENST00000511620.5
CDS-3UTR GCA 90 bp TGTCCAGGGTGCCCTCAGCCTGCTGGAACGGAAACAAGACGGCCCTTTGTACCTGAATGCCTGGATATCTaGGTCGGTCTTTGCCGAGGC +
Preference number: 4 (lower is better)
Translates to: CPGCPQPAGTETRRPFVPECLDI*VGLCRG
Trigger: GCCTCGGCAAAGACCGACGCAGATATCCAGGCATTC...AGGTACAAAGGGCCGTCTTGTTTCCGTTCCAGCAGGCTGAGGGCACCCTGGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508428.5
CDS-3UTR GCA 90 bp GTGTCCAGGGTGCCCTCAGCCTGCTGGAACGGAAACAAGACGGCCCTTTGTACCTCTCGCAGGGCCGGCTaGTATCTCAGACTTTGTAGT +
Preference number: 4 (lower is better)
Translates to: VSRVPSACWNGNKTALCTSRRAG*YLRLCS
Trigger: ACTACAAAGTCTGAGATAGCAGCCGGCCCTGCGAGA...GGTACAAAGGGCCGTCTTGTTTCCGTTCCAGCAGGCTGAGGGCACCCTGGACAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510715.5
ENST00000511620.5
CDS-3UTR CCA 90 bp TGCCCTCAGCCTGCTGGAACGGAAACAAGACGGCCCTTTGTACCTCAGCATATAAAGCACGACGTCCTGTaGGGCGGCTGGAAGCAGCGA +
Preference number: 4 (lower is better)
Translates to: CPQPAGTETRRPFVPQHIKHDVL*GGWKQR
Trigger: TCGCTGCTTCCAGCCGCCCCACAGGACGTCGTGCTT...TATATGCTGAGGTACAAAGGGCCGTCTTGTTTCCGTTCCAGCAGGCTGAGGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382968.9
ENST00000508428.5
ENST00000510715.5
ENST00000511620.5
3UTR CAA 72 bp ACACACTCTCCGGGCACAGGGGGCCATTCGTCCATCTaGAGGTGGACTAATCATGGAGATTCTCGCAGGGCC +
Preference number: 4 (lower is better)
Translates to: THSPGTGGHSSI*RWTNHGDSRRA
Trigger: GGCCCTGCGAGAATCTCCATGATTAGTCCACCTCAAGATGGACGAATGGCCCCCTGTGCCCGGAGAGTGTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000508428.5
ENST00000510715.5
CDS-3UTR TCA 90 bp CATTCGTCCATCTTGAGGTGGACTAATCATGGAGATTCTCGCAGGGCCGGCTGCAAGGCGTGCTGTTGGTaGCTCGCTGTCAGACACAGG +
Preference number: 4 (lower is better)
Translates to: HSSILRWTNHGDSRRAGCKACCW*LAVRHR
Trigger: CCTGTGTCTGACAGCGAGTCACCAACAGCACGCCTT...GCAGCCGGCCCTGCGAGAATCTCCATGATTAGTCCACCTCAAGATGGACGAATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510715.5
CDS-3UTR GCA 90 bp GATGGGGGAGCTGTGCGTGTGTGGAGTCATGGTGTATATGGGAAATCTGTACCTGCGTCGCAGTACACGTaGCCGCAGTTGGTGAGGCTG +
Preference number: 4 (lower is better)
Translates to: DGGAVRVWSHGVYGKSVPASQYT*PQLVRL
Trigger: CAGCCTCACCAACTGCGGGCACGTGTACTGCGACGC...AGGTACAGATTTCCCATATACACCATGACTCCACACACGCACAGCTCCCCCATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000382968.9
ENST00000433731.7
CDS-3UTR GCA 90 bp ACACACTCTCCGGGCACAGGGGGCCATTCGTCCATCTTGAGGTGGACTAATCATAGGGTGCCCTCAGCCTaGTGGAACGGAAACAAGACG +
Preference number: 4 (lower is better)
Translates to: THSPGTGGHSSILRWTNHRVPSA*WNGNKT
Trigger: CGTCTTGTTTCCGTTCCAGCAGGCTGAGGGCACCCT...ATGATTAGTCCACCTCAAGATGGACGAATGGCCCCCTGTGCCCGGAGAGTGTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000508428.5
ENST00000510715.5
CDS-3UTR CCA 90 bp TGCCCTCAGCCTGCTGGAACGGAAACAAGACGGCCCTTTGTACCTCAGCATATAGTGCCCTCAGCCTGCTaGAACGGAAACAAGACGGCC +
Preference number: 4 (lower is better)
Translates to: CPQPAGTETRRPFVPQHIVPSAC*NGNKTA
Trigger: GGCCGTCTTGTTTCCGTTCCAGCAGGCTGAGGGCAC...TATATGCTGAGGTACAAAGGGCCGTCTTGTTTCCGTTCCAGCAGGCTGAGGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382968.9
ENST00000508428.5
ENST00000510715.5
ENST00000511620.5
CDS-3UTR CCA 90 bp TCGTCCATCTTGAGGTGGACTAATCATGGAGATTCTCGCAGGGCCGGCTGCTATGTGCCCTCAGCCTGCTaGAACGGAAACAAGACGGCC +
Preference number: 4 (lower is better)
Translates to: SSILRWTNHGDSRRAGCYVPSAC*NGNKTA
Trigger: GGCCGTCTTGTTTCCGTTCCAGCAGGCTGAGGGCAC...ATAGCAGCCGGCCCTGCGAGAATCTCCATGATTAGTCCACCTCAAGATGGACGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508428.5
ENST00000510715.5
CDS-3UTR CCA 90 bp GGTGCCCTCAGCCTGCTGGAACGGAAACAAGACGGCCCTTTGTACCTCAGCATACATGGACTGCTCTGGTaGAGGATGAGGATGATGGGG +
Preference number: 4 (lower is better)
Translates to: GALSLLERKQDGPLYLSIHGLLW*RMRMMG
Trigger: CCCCATCATCCTCATCCTCCACCAGAGCAGTCCATG...TATGCTGAGGTACAAAGGGCCGTCTTGTTTCCGTTCCAGCAGGCTGAGGGCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382968.9
CDS-3UTR TCA 90 bp CATTCGTCCATCTTGAGGTGGACTAATCATGGAGATTCTCGCAGGGCCGGCTGCGTGAACCTCTGGAAATaGCACACTCTCCGGGCACAG +
Preference number: 4 (lower is better)
Translates to: HSSILRWTNHGDSRRAGCVNLWK*HTLRAQ
Trigger: CTGTGCCCGGAGAGTGTGTCATTTCCAGAGGTTCAC...GCAGCCGGCCCTGCGAGAATCTCCATGATTAGTCCACCTCAAGATGGACGAATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508428.5
ENST00000510715.5
CDS-3UTR TCA 90 bp ACACACTCTCCGGGCACAGGGGGCCATTCGTCCATCTTGAGGTGGACTAATCATGTGAACCTCTGGAAATaGCACACTCTCCGGGCACAG +
Preference number: 4 (lower is better)
Translates to: THSPGTGGHSSILRWTNHVNLWK*HTLRAQ
Trigger: CTGTGCCCGGAGAGTGTGTCATTTCCAGAGGTTCAC...ATGATTAGTCCACCTCAAGATGGACGAATGGCCCCCTGTGCCCGGAGAGTGTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000508428.5
ENST00000510715.5
CDS-3UTR TCA 90 bp TGCCCTCAGCCTGCTGGAACGGAAACAAGACGGCCCTTTGTACCTCAGCATATAAGGAGGAGCAGCCAGTaGGGACAGACGTCTATGCAG +
Preference number: 4 (lower is better)
Translates to: CPQPAGTETRRPFVPQHIRRSSQ*GQTSMQ
Trigger: CTGCATAGACGTCTGTCCTCACTGGCTGCTCCTCCT...TATATGCTGAGGTACAAAGGGCCGTCTTGTTTCCGTTCCAGCAGGCTGAGGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382968.9
ENST00000508428.5
ENST00000510715.5
ENST00000511620.5
CDS-3UTR TCA 90 bp GATGGGGGAGCTGTGCGTGTGTGGAGTCATGGTGTATATGGGAAATCTGTACCTCGTGCCTTCCAGAACTaGACGCTAGGAGGAGCAGCC +
Preference number: 4 (lower is better)
Translates to: DGGAVRVWSHGVYGKSVPRAFQN*TLGGAA
Trigger: GGCTGCTCCTCCTAGCGTTCAGTTCTGGAAGGCACG...AGGTACAGATTTCCCATATACACCATGACTCCACACACGCACAGCTCCCCCATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000382968.9
ENST00000433731.7
CDS-3UTR GCA 90 bp AGAACACTGACATCATCAAATGTGAGGACGTGGAGCAACAGGAACTCTCATTCGACACCCAGTTGGCCATaGCAGGCGGGCGACCGCAGC +
Preference number: 4 (lower is better)
Translates to: RTLTSSNVRTWSNRNSHSTPSWP*QAGDRS
Trigger: GCTGCGGTCGCCCGCCTGGCATGGCCAACTGGGTGT...CGAATGAGAGTTCCTGTTGCTCCACGTCCTCACATTTGATGATGTCAGTGTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382968.9
ENST00000433731.7
CDS-3UTR GCA 90 bp GTGTCCAGGGTGCCCTCAGCCTGCTGGAACGGAAACAAGACGGCCCTTTGTACCTCTCGCAGGGCCGGCTaGTATCTCAGATTTTCTAAT +
Preference number: 4 (lower is better)
Translates to: VSRVPSACWNGNKTALCTSRRAG*YLRFSN
Trigger: ATTAGAAAATCTGAGATAGCAGCCGGCCCTGCGAGA...GGTACAAAGGGCCGTCTTGTTTCCGTTCCAGCAGGCTGAGGGCACCCTGGACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382968.9
ENST00000508428.5
CDS-3UTR CCA 90 bp TGGCCAAAATCCAGAACACTGACATCATCAAATGTGAGGACGTGGAGCAACAGGAAGCCCACGCAAGGTTaGGACCAGCCTCCCCGCGCA +
Preference number: 4 (lower is better)
Translates to: WPKSRTLTSSNVRTWSNRKPTQG*DQPPRA
Trigger: TGCGCGGGGAGGCTGGTCCCAACCTTGCGTGGGCTT...CCTGTTGCTCCACGTCCTCACATTTGATGATGTCAGTGTTCTGGATTTTGGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382968.9
ENST00000433731.7
CDS-3UTR CCA 90 bp ATCAGCTGGCCAAAATCCAGAACACTGACATCATCAAATGTGAGGACGTGGAGCAAGCCCACGCAAGGTTaGGACCAGCCTCCCCGCGCA +
Preference number: 4 (lower is better)
Translates to: ISWPKSRTLTSSNVRTWSKPTQG*DQPPRA
Trigger: TGCGCGGGGAGGCTGGTCCCAACCTTGCGTGGGCTT...GCTCCACGTCCTCACATTTGATGATGTCAGTGTTCTGGATTTTGGCCAGCTGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382968.9
ENST00000433731.7
CDS-3UTR TCA 90 bp TGGACTAATCATGGAGATTCTCGCAGGGCCGGCTGCTATCTCAGACTTTGTAGTTCTGCGTCGGTAGCGTaGCTGAAGGCCTTTGCTGCG +
Preference number: 4 (lower is better)
Translates to: WTNHGDSRRAGCYLRLCSSASVA*LKAFAA
Trigger: CGCAGCAAAGGCCTTCAGTCACGCTACCGACGCAGA...ACTACAAAGTCTGAGATAGCAGCCGGCCCTGCGAGAATCTCCATGATTAGTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510715.5
CDS-3UTR GCA 90 bp GGACTAATCATGGAGATTCTCGCAGGGCCGGCTGCTATCTCAGATTTTCTAATCGCGTCGCAGTACACGTaGCCGCAGTTGGTGAGGCTG +
Preference number: 4 (lower is better)
Translates to: GLIMEILAGPAAISDFLIASQYT*PQLVRL
Trigger: CAGCCTCACCAACTGCGGGCACGTGTACTGCGACGC...GATTAGAAAATCTGAGATAGCAGCCGGCCCTGCGAGAATCTCCATGATTAGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506730.5
ENST00000508428.5
CDS-3UTR GCA 90 bp GGGGGCCATTCGTCCATCTTGAGGTGGACTAATCATGGAGATTCTCGCAGGGCCGGAAATCAACCCTGGTaGAGAGCAATCGAGTCCACA +
Preference number: 4 (lower is better)
Translates to: GGHSSILRWTNHGDSRRAGNQPW*RAIEST
Trigger: TGTGGACTCGATTGCTCTGCACCAGGGTTGATTTCC...GGCCCTGCGAGAATCTCCATGATTAGTCCACCTCAAGATGGACGAATGGCCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000510715.5
CDS-3UTR CCA 90 bp GGAGCAGCCAGTGAGGACAGACGTCTATGCAGAAACATGGTGAACCTCTGGAAAGTCCTGTGGGGCGGCTaGAAGCAGCGATTACAGAAC +
Preference number: 4 (lower is better)
Translates to: GAASEDRRLCRNMVNLWKVLWGG*KQRLQN
Trigger: GTTCTGTAATCGCTGCTTCCAGCCGCCCCACAGGAC...TTTCCAGAGGTTCACCATGTTTCTGCATAGACGTCTGTCCTCACTGGCTGCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000508428.5
ENST00000510715.5
ENST00000511620.5
CDS-3UTR CCA 90 bp ATCATGGAGATTCTCGCAGGGCCGGCTGCTATCTCAGATTTTCTAATCGGAGAAAAGCACGACGTCCTGTaGGGCGGCTGGAAGCAGCGA +
Preference number: 4 (lower is better)
Translates to: IMEILAGPAAISDFLIGEKHDVL*GGWKQR
Trigger: TCGCTGCTTCCAGCCGCCCCACAGGACGTCGTGCTT...TTCTCCGATTAGAAAATCTGAGATAGCAGCCGGCCCTGCGAGAATCTCCATGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000506730.5
ENST00000508428.5
CDS-3UTR CCA 90 bp ACCTCAGCATATATTGGAAGTGTTTTAGAGTTGGTGAGTTCCCCGTGCCTTCCAAAGCCCACGCAAGGTTaGGACCAGCCTCCCCGCGCA +
Preference number: 4 (lower is better)
Translates to: TSAYIGSVLELVSSPCLPKPTQG*DQPPRA
Trigger: TGCGCGGGGAGGCTGGTCCCAACCTTGCGTGGGCTT...TGGAAGGCACGGGGAACTCACCAACTCTAAAACACTTCCAATATATGCTGAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000510715.5
CDS-3UTR CCA 90 bp GGTGCCCTCAGCCTGCTGGAACGGAAACAAGACGGCCCTTTGTACCTCAGCATAACACATGGACTGCTCTaGTGGAGGATGAGGATGATG +
Preference number: 4 (lower is better)
Translates to: GALSLLERKQDGPLYLSITHGLL*WRMRMM
Trigger: CATCATCCTCATCCTCCACCAGAGCAGTCCATGTGT...TATGCTGAGGTACAAAGGGCCGTCTTGTTTCCGTTCCAGCAGGCTGAGGGCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382968.9
CDS-3UTR GCA 90 bp TGTAGTTGTTCTATCTGCAGCACTGACTTCCTAAGGGATTCTTCCAACCTAGAAACACCCAGTTGGCCATaGCAGGCGGGCGACCGCAGC +
Preference number: 4 (lower is better)
Translates to: CSCSICSTDFLRDSSNLETPSWP*QAGDRS
Trigger: GCTGCGGTCGCCCGCCTGGCATGGCCAACTGGGTGT...TTCTAGGTTGGAAGAATCCCTTAGGAAGTCAGTGCTGCAGATAGAACAACTACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506730.5
ENST00000508428.5
ENST00000510715.5
CDS-3UTR GCA 90 bp GTGTCCAGGGTGCCCTCAGCCTGCTGGAACGGAAACAAGACGGCCCTTTGTACCTGTAGTTGTTCTATCTaGAGCACTGACTTCCTAAGG +
Preference number: 4 (lower is better)
Translates to: VSRVPSACWNGNKTALCTCSCSI*STDFLR
Trigger: CCTTAGGAAGTCAGTGCTGCAGATAGAACAACTACA...GGTACAAAGGGCCGTCTTGTTTCCGTTCCAGCAGGCTGAGGGCACCCTGGACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382968.9
ENST00000508428.5
ENST00000510715.5
ENST00000511620.5
CDS-3UTR GCA 90 bp ATCATGGAGATTCTCGCAGGGCCGGCTGCTATCTCAGATTTTCTAATCGGAGAAATCTGCGTCGGTCTTTaGCGAGGCAGGCGTCGCAGT +
Preference number: 4 (lower is better)
Translates to: IMEILAGPAAISDFLIGEICVGL*RGRRRS
Trigger: ACTGCGACGCCTGCCTCGGCAAAGACCGACGCAGAT...TTCTCCGATTAGAAAATCTGAGATAGCAGCCGGCCCTGCGAGAATCTCCATGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506730.5
ENST00000508428.5
CDS-3UTR GCA 90 bp TCGTCCATCTTGAGGTGGACTAATCATGGAGATTCTCGCAGGGCCGGCTGCTATTCTCGCAGGGCCGGCTaGTATCTCAGACTTTGTAGT +
Preference number: 4 (lower is better)
Translates to: SSILRWTNHGDSRRAGCYSRRAG*YLRLCS
Trigger: ACTACAAAGTCTGAGATAGCAGCCGGCCCTGCGAGA...ATAGCAGCCGGCCCTGCGAGAATCTCCATGATTAGTCCACCTCAAGATGGACGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510715.5
CDS-3UTR CCA 90 bp GAGGTTTCCCTGGAGTACTTCTTACACAGACTGTCTATGCTCATGAAGAATGCCAAGCACGACGTCCTGTaGGGCGGCTGGAAGCAGCGA +
Preference number: 4 (lower is better)
Translates to: EVSLEYFLHRLSMLMKNAKHDVL*GGWKQR
Trigger: TCGCTGCTTCCAGCCGCCCCACAGGACGTCGTGCTT...GGCATTCTTCATGAGCATAGACAGTCTGTGTAAGAAGTACTCCAGGGAAACCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510715.5
CDS-3UTR CCA 90 bp GGCTGCTATCTCAGATTTTCTAATCGGAGAAGGAGAGAGATCAACTTCCATCGAAAGCCCACGCAAGGTTaGGACCAGCCTCCCCGCGCA +
Preference number: 4 (lower is better)
Translates to: GCYLRFSNRRRREINFHRKPTQG*DQPPRA
Trigger: TGCGCGGGGAGGCTGGTCCCAACCTTGCGTGGGCTT...TCGATGGAAGTTGATCTCTCTCCTTCTCCGATTAGAAAATCTGAGATAGCAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506730.5
CDS-3UTR CCA 90 bp GGTGCCCTCAGCCTGCTGGAACGGAAACAAGACGGCCCTTTGTACCTCAGCATATCTGGGAGGTTTCCCTaGAGTACTTCTTACACAGAC +
Preference number: 4 (lower is better)
Translates to: GALSLLERKQDGPLYLSISGRFP*STSYTD
Trigger: GTCTGTGTAAGAAGTACTCCAGGGAAACCTCCCAGA...TATGCTGAGGTACAAAGGGCCGTCTTGTTTCCGTTCCAGCAGGCTGAGGGCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382968.9
ENST00000508428.5
ENST00000510715.5
ENST00000511620.5
CDS-3UTR TCA 90 bp TATTGGAAGTGTTTTAGAGTTGGTGAGTTCCCCGTGCCTTCCAGAACTGAACGCAGGAGGAGCAGCCAGTaGGGACAGACGTCTATGCAG +
Preference number: 4 (lower is better)
Translates to: YWKCFRVGEFPVPSRTERRRSSQ*GQTSMQ
Trigger: CTGCATAGACGTCTGTCCTCACTGGCTGCTCCTCCT...GCGTTCAGTTCTGGAAGGCACGGGGAACTCACCAACTCTAAAACACTTCCAATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000508428.5
ENST00000510715.5
ENST00000511620.5
CDS-3UTR TCA 90 bp GAGTTGGTGAGTTCCCCGTGCCTTCCAGAACTGAACGCTAGGAGGAGCAGCCAGAGGTCAACCATGGGATaGAACAGAAAGAAGCTGTTA +
Preference number: 4 (lower is better)
Translates to: ELVSSPCLPELNARRSSQRSTMG*NRKKLL
Trigger: TAACAGCTTCTTTCTGTTTCATCCCATGGTTGACCT...CTGGCTGCTCCTCCTAGCGTTCAGTTCTGGAAGGCACGGGGAACTCACCAACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511620.5
CDS-3UTR GCA 90 bp TGGAAGCAACCAAGATGCCCTTCAGTAGGTGAATGGATGAACTATGATACATCCGCGTCGCAGTACACGTaGCCGCAGTTGGTGAGGCTG +
Preference number: 4 (lower is better)
Translates to: WKQPRCPSVGEWMNYDTSASQYT*PQLVRL
Trigger: CAGCCTCACCAACTGCGGGCACGTGTACTGCGACGC...GGATGTATCATAGTTCATCCATTCACCTACTGAAGGGCATCTTGGTTGCTTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382968.9
ENST00000433731.7
CDS-3UTR GCA 90 bp GGGGGCCATTCGTCCATCTTGAGGTGGACTAATCATGGAGATTCTCGCAGGGCCTATGCTCATGAAGAATaGCTGGATATCTGCGTCGGT +
Preference number: 4 (lower is better)
Translates to: GGHSSILRWTNHGDSRRAYAHEE*LDICVG
Trigger: ACCGACGCAGATATCCAGGCATTCTTCATGAGCATA...GGCCCTGCGAGAATCTCCATGATTAGTCCACCTCAAGATGGACGAATGGCCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000508428.5
ENST00000510715.5
CDS-3UTR GCA 90 bp TGTCCAGGGTGCCCTCAGCCTGCTGGAACGGAAACAAGACGGCCCTTTGTACCTTGTAGTTGTTCTATCTaGAGCACTGACTTCCTAAGG +
Preference number: 4 (lower is better)
Translates to: CPGCPQPAGTETRRPFVPCSCSI*STDFLR
Trigger: CCTTAGGAAGTCAGTGCTGCAGATAGAACAACTACA...AGGTACAAAGGGCCGTCTTGTTTCCGTTCCAGCAGGCTGAGGGCACCCTGGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382968.9
ENST00000508428.5
ENST00000510715.5
ENST00000511620.5
CDS-3UTR GCA 90 bp AGGAAACACAACAGACACAGCGGGTGTTCTGAACGTGTCCAGGGTGCCCTCAGCCACTATTCCATATGCTaGTACGATGGGGACACATGT +
Preference number: 4 (lower is better)
Translates to: RKHNRHSGCSERVQGALSHYSIC*YDGDTC
Trigger: ACATGTGTCCCCATCGTAGCAGCATATGGAATAGTG...GCTGAGGGCACCCTGGACACGTTCAGAACACCCGCTGTGTCTGTTGTGTTTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382968.9
CDS-3UTR GCA 90 bp GATGATCTCATACTTTGTAGTTGTTCTATCTGCAGCACTGACTTCCTAAGGGATGTTGTCAGGCCGGGATaGTCGGGGCCCAGGGAGGAG +
Preference number: 4 (lower is better)
Translates to: DDLILCSCSICSTDFLRDVVRPG*SGPREE
Trigger: CTCCTCCCTGGGCCCCGAGCATCCCGGCCTGACAAC...ATCCCTTAGGAAGTCAGTGCTGCAGATAGAACAACTACAAAGTATGAGATCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506730.5
CDS-3UTR CCA 90 bp GTTTCCCTGGAGTACTTCTTACACAGACTGTCTATGCTCATGAAGAATGCCTGGTACAGAACACCCAGTTaGCCATGCCAGGCGGGCGAC +
Preference number: 4 (lower is better)
Translates to: VSLEYFLHRLSMLMKNAWYRTPS*PCQAGD
Trigger: GTCGCCCGCCTGGCATGGCCAACTGGGTGTTCTGTA...CCAGGCATTCTTCATGAGCATAGACAGTCTGTGTAAGAAGTACTCCAGGGAAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510715.5
CDS-3UTR CCA 90 bp GGGGGCTTAGACAAGGTCAACCATGGGATGAAACAGAAAGAAGCTGTTAGATGTTACAGAACACCCAGTTaGCCATGCCAGGCGGGCGAC +
Preference number: 4 (lower is better)
Translates to: GGLDKVNHGMKQKEAVRCYRTPS*PCQAGD
Trigger: GTCGCCCGCCTGGCATGGCCAACTGGGTGTTCTGTA...ACATCTAACAGCTTCTTTCTGTTTCATCCCATGGTTGACCTTGTCTAAGCCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511620.5
CDS-3UTR CCA 90 bp ATCAGCTGGCCAAAATCCAGAACACTGACATCATCAAATGTGAGGACGTGGAGCGTCCTGTGGGGCGGCTaGAAGCAGCGATTACAGAAC +
Preference number: 4 (lower is better)
Translates to: ISWPKSRTLTSSNVRTWSVLWGG*KQRLQN
Trigger: GTTCTGTAATCGCTGCTTCCAGCCGCCCCACAGGAC...GCTCCACGTCCTCACATTTGATGATGTCAGTGTTCTGGATTTTGGCCAGCTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382968.9
ENST00000433731.7
CDS-3UTR CCA 90 bp TGTACCTCAGCATATATTGGAAGTGTTTTAGAGTTGGTGAGTTCCCCGTGCCTTAAGCACGACGTCCTGTaGGGCGGCTGGAAGCAGCGA +
Preference number: 4 (lower is better)
Translates to: CTSAYIGSVLELVSSPCLKHDVL*GGWKQR
Trigger: TCGCTGCTTCCAGCCGCCCCACAGGACGTCGTGCTT...AAGGCACGGGGAACTCACCAACTCTAAAACACTTCCAATATATGCTGAGGTACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000508428.5
ENST00000510715.5
ENST00000511620.5
CDS-3UTR CCA 90 bp GCAAAGAGGAAACACAACAGACACAGCGGGTGTTCTGAACGTGTCCAGGGTGCCCTCATGAAGAATGCCTaGATATCTGCGTCGGTATGC +
Preference number: 4 (lower is better)
Translates to: AKRKHNRHSGCSERVQGALMKNA*ISASVC
Trigger: GCATACCGACGCAGATATCCAGGCATTCTTCATGAG...GGCACCCTGGACACGTTCAGAACACCCGCTGTGTCTGTTGTGTTTCCTCTTTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382968.9
ENST00000511620.5
CDS-3UTR CCA 90 bp GTGCCCTCAGCCTGCTGGAACGGAAACAAGACGGCCCTTTGTACCTCAGCATATTCTGGGAGGTTTCCCTaGAGTACTTCTTACACAGAC +
Preference number: 4 (lower is better)
Translates to: VPSACWNGNKTALCTSAYSGRFP*STSYTD
Trigger: GTCTGTGTAAGAAGTACTCCAGGGAAACCTCCCAGA...ATATGCTGAGGTACAAAGGGCCGTCTTGTTTCCGTTCCAGCAGGCTGAGGGCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382968.9
ENST00000508428.5
ENST00000510715.5
ENST00000511620.5
CDS-3UTR CCA 90 bp CATTCGTCCATCTTGAGGTGGACTAATCATGGAGATTCTCGCAGGGCCGGCTGCTCTGGGAGGTTTCCCTaGAGTACTTCTTACACAGAC +
Preference number: 4 (lower is better)
Translates to: HSSILRWTNHGDSRRAGCSGRFP*STSYTD
Trigger: GTCTGTGTAAGAAGTACTCCAGGGAAACCTCCCAGA...GCAGCCGGCCCTGCGAGAATCTCCATGATTAGTCCACCTCAAGATGGACGAATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506730.5
ENST00000508428.5
ENST00000510715.5
CDS-3UTR CCA 90 bp CTGCTCTGGTGGAGGATGAGGATGATGGGGGAGCTGTGCGTGTGTGGAGTCATGTCGTCCATCTTGAGGTaGACTAATCATGGAGATTCT +
Preference number: 4 (lower is better)
Translates to: LLWWRMRMMGELCVCGVMSSILR*TNHGDS
Trigger: AGAATCTCCATGATTAGTCCACCTCAAGATGGACGA...CATGACTCCACACACGCACAGCTCCCCCATCATCCTCATCCTCCACCAGAGCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000382968.9
ENST00000433731.7
CDS-3UTR CCA 90 bp AGAACACTGACATCATCAAATGTGAGGACGTGGAGCAACAGGAACTCTCATTCGGTGCCCTCAGCCTGCTaGAACGGAAACAAGACGGCC +
Preference number: 4 (lower is better)
Translates to: RTLTSSNVRTWSNRNSHSVPSAC*NGNKTA
Trigger: GGCCGTCTTGTTTCCGTTCCAGCAGGCTGAGGGCAC...CGAATGAGAGTTCCTGTTGCTCCACGTCCTCACATTTGATGATGTCAGTGTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382968.9
ENST00000433731.7
CDS-3UTR CCA 90 bp AGGGTGCCCTCAGCCTGCTGGAACGGAAACAAGACGGCCCTTTGTACCTCAGCATACATACCTATCAGCTaGCCAAAATCCAGAACACTG +
Preference number: 4 (lower is better)
Translates to: RVPSACWNGNKTALCTSAYIPIS*PKSRTL
Trigger: CAGTGTTCTGGATTTTGGCCAGCTGATAGGTATGTA...TGCTGAGGTACAAAGGGCCGTCTTGTTTCCGTTCCAGCAGGCTGAGGGCACCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382968.9
CDS-3UTR TCA 90 bp TGGCCAAAATCCAGAACACTGACATCATCAAATGTGAGGACGTGGAGCAACAGGGTGAACCTCTGGAAATaGCACACTCTCCGGGCACAG +
Preference number: 4 (lower is better)
Translates to: WPKSRTLTSSNVRTWSNRVNLWK*HTLRAQ
Trigger: CTGTGCCCGGAGAGTGTGTCATTTCCAGAGGTTCAC...CCTGTTGCTCCACGTCCTCACATTTGATGATGTCAGTGTTCTGGATTTTGGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382968.9
ENST00000433731.7
CDS-3UTR TCA 90 bp TGGAAGCAACCAAGATGCCCTTCAGTAGGTGAATGGATGAACTATGATACATCCCGTGCCTTCCAGAACTaGACGCTAGGAGGAGCAGCC +
Preference number: 4 (lower is better)
Translates to: WKQPRCPSVGEWMNYDTSRAFQN*TLGGAA
Trigger: GGCTGCTCCTCCTAGCGTTCAGTTCTGGAAGGCACG...GGATGTATCATAGTTCATCCATTCACCTACTGAAGGGCATCTTGGTTGCTTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382968.9
ENST00000433731.7
CDS-3UTR TCA 90 bp TGTACCTCAGCATATATTGGAAGTGTTTTAGAGTTGGTGAGTTCCCCGTGCCTTACACAGCGGGTGTTCTaGACGTGTCCAGGGTGCCCT +
Preference number: 4 (lower is better)
Translates to: CTSAYIGSVLELVSSPCLTQRVF*TCPGCP
Trigger: AGGGCACCCTGGACACGTTCAGAACACCCGCTGTGT...AAGGCACGGGGAACTCACCAACTCTAAAACACTTCCAATATATGCTGAGGTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000508428.5
ENST00000511620.5
CDS-3UTR TCA 90 bp GATGGGGGAGCTGTGCGTGTGTGGAGTCATGGTGTATATGGGAAATCTGTACCTCCCATTCGTCCATCTTaGGGTGGACTAATCATGGAG +
Preference number: 4 (lower is better)
Translates to: DGGAVRVWSHGVYGKSVPPIRPS*GGLIME
Trigger: CTCCATGATTAGTCCACCTCAAGATGGACGAATGGG...AGGTACAGATTTCCCATATACACCATGACTCCACACACGCACAGCTCCCCCATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000433731.7
CDS-3UTR GCA 90 bp ATATATTGGAAGTGTTTTAGAGTTGGTGAGTTCCCCGTGCCTTCCAGAACTGAAGCGTCGCAGTACACGTaGCCGCAGTTGGTGAGGCTG +
Preference number: 4 (lower is better)
Translates to: IYWKCFRVGEFPVPSRTEASQYT*PQLVRL
Trigger: CAGCCTCACCAACTGCGGGCACGTGTACTGCGACGC...TTCAGTTCTGGAAGGCACGGGGAACTCACCAACTCTAAAACACTTCCAATATAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000508428.5
ENST00000510715.5
ENST00000511620.5
CDS-3UTR GCA 90 bp CCCTCAGCCTGCTGGAACGGAAACAAGACGGCCCTTTGTACCTCAGCATATATTCATTCTTTTTACCTTTaGCGAGGCAGGCGTCGCAGT +
Preference number: 4 (lower is better)
Translates to: PSACWNGNKTALCTSAYIHSFYL*RGRRRS
Trigger: ACTGCGACGCCTGCCTCGGCAAAGGTAAAAAGAATG...AATATATGCTGAGGTACAAAGGGCCGTCTTGTTTCCGTTCCAGCAGGCTGAGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000382968.9
ENST00000510715.5
ENST00000511620.5
CDS-3UTR GCA 90 bp TGGCAAAGAGGAAACACAACAGACACAGCGGGTGTTCTGAACGTGTCCAGGGTGTCTCGCAGGGCCGGCTaGTATCTCAGATTTTCTAAT +
Preference number: 4 (lower is better)
Translates to: WQRGNTTDTAGVLNVSRVSRRAG*YLRFSN
Trigger: ATTAGAAAATCTGAGATAGCAGCCGGCCCTGCGAGA...CACCCTGGACACGTTCAGAACACCCGCTGTGTCTGTTGTGTTTCCTCTTTGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382968.9
ENST00000508428.5
CDS-3UTR GCA 90 bp GGTGCCCTCAGCCTGCTGGAACGGAAACAAGACGGCCCTTTGTACCTCAGCATAACAGGAAAGGGGCGATaGTTTGAAAGCAAAACTGTA +
Preference number: 4 (lower is better)
Translates to: GALSLLERKQDGPLYLSITGKGR*FESKTV
Trigger: TACAGTTTTGCTTTCAAAGCATCGCCCCTTTCCTGT...TATGCTGAGGTACAAAGGGCCGTCTTGTTTCCGTTCCAGCAGGCTGAGGGCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510715.5
CDS-3UTR CCA 90 bp GAAAGGAGTCAATCTGAGAAGCCACATACTGTACAATTCCAACTCCAGGAGAGTTACAGAACACCCAGTTaGCCATGCCAGGCGGGCGAC +
Preference number: 4 (lower is better)
Translates to: ERSQSEKPHTVQFQLQESYRTPS*PCQAGD
Trigger: GTCGCCCGCCTGGCATGGCCAACTGGGTGTTCTGTA...ACTCTCCTGGAGTTGGAATTGTACAGTATGTGGCTTCTCAGATTGACTCCTTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382968.9
ENST00000433731.7
CDS-3UTR CCA 90 bp TCCATCTTGAGGTGGACTAATCATGGAGATTCTCGCAGGGCCGGCTGCTATCTCTCTGGGAGGTTTCCCTaGAGTACTTCTTACACAGAC +
Preference number: 4 (lower is better)
Translates to: SILRWTNHGDSRRAGCYLSGRFP*STSYTD
Trigger: GTCTGTGTAAGAAGTACTCCAGGGAAACCTCCCAGA...GAGATAGCAGCCGGCCCTGCGAGAATCTCCATGATTAGTCCACCTCAAGATGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506730.5
ENST00000508428.5
ENST00000510715.5
CDS-3UTR CCA 90 bp GGTGCCCTCAGCCTGCTGGAACGGAAACAAGACGGCCCTTTGTACCTCAGCATATCGTCCATCTTGAGGTaGACTAATCATGGAGATTCT +
Preference number: 4 (lower is better)
Translates to: GALSLLERKQDGPLYLSISSILR*TNHGDS
Trigger: AGAATCTCCATGATTAGTCCACCTCAAGATGGACGA...TATGCTGAGGTACAAAGGGCCGTCTTGTTTCCGTTCCAGCAGGCTGAGGGCACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382968.9
ENST00000508428.5
ENST00000510715.5
ENST00000511620.5
CDS-3UTR CCA 90 bp TGTACCTCAGCATATATTGGAAGTGTTTTAGAGTTGGTGAGTTCCCCGTGCCTTGTGCCCTCAGCCTGCTaGAACGGAAACAAGACGGCC +
Preference number: 4 (lower is better)
Translates to: CTSAYIGSVLELVSSPCLVPSAC*NGNKTA
Trigger: GGCCGTCTTGTTTCCGTTCCAGCAGGCTGAGGGCAC...AAGGCACGGGGAACTCACCAACTCTAAAACACTTCCAATATATGCTGAGGTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000508428.5
ENST00000510715.5
ENST00000511620.5
CDS-3UTR TCA 90 bp GGGGGCTTAGACAAGGTCAACCATGGGATGAAACAGAAAGAAGCTGTTAGATGTGTGAACCTCTGGAAATaGCACACTCTCCGGGCACAG +
Preference number: 4 (lower is better)
Translates to: GGLDKVNHGMKQKEAVRCVNLWK*HTLRAQ
Trigger: CTGTGCCCGGAGAGTGTGTCATTTCCAGAGGTTCAC...ACATCTAACAGCTTCTTTCTGTTTCATCCCATGGTTGACCTTGTCTAAGCCCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511620.5
CDS-3UTR TCA 90 bp CTTTCAAAACTAAACACCCTCTCACCATCTGATCCAGCATTCACACTCCTTAGTACACAGCGGGTGTTCTaGACGTGTCCAGGGTGCCCT +
Preference number: 4 (lower is better)
Translates to: LSKLNTLSPSDPAFTLLSTQRVF*TCPGCP
Trigger: AGGGCACCCTGGACACGTTCAGAACACCCGCTGTGT...ACTAAGGAGTGTGAATGCTGGATCAGATGGTGAGAGGGTGTTTAGTTTTGAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382968.9
ENST00000433731.7
CDS-3UTR GCA 90 bp TGGACTAATCATGGAGATTCTCGCAGGGCCGGCTGCTATCTCAGACTTTGTAGTCATTCTTTTTACCTTTaGCGAGGCAGGCGTCGCAGT +
Preference number: 4 (lower is better)
Translates to: WTNHGDSRRAGCYLRLCSHSFYL*RGRRRS
Trigger: ACTGCGACGCCTGCCTCGGCAAAGGTAAAAAGAATG...ACTACAAAGTCTGAGATAGCAGCCGGCCCTGCGAGAATCTCCATGATTAGTCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000510715.5
CDS-3UTR GCA 90 bp TCCATCTTGAGGTGGACTAATCATGGAGATTCTCGCAGGGCCGGCTGCTATCTCTATGCTCATGAAGAATaGCTGGATATCTGCGTCGGT +
Preference number: 4 (lower is better)
Translates to: SILRWTNHGDSRRAGCYLYAHEE*LDICVG
Trigger: ACCGACGCAGATATCCAGGCATTCTTCATGAGCATA...GAGATAGCAGCCGGCCCTGCGAGAATCTCCATGATTAGTCCACCTCAAGATGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506730.5
ENST00000508428.5
ENST00000510715.5
CDS-3UTR GCA 90 bp ACACACTCTCCGGGCACAGGGGGCCATTCGTCCATCTTGAGGTGGACTAATCATTGTAGTTGTTCTATCTaGAGCACTGACTTCCTAAGG +
Preference number: 4 (lower is better)
Translates to: THSPGTGGHSSILRWTNHCSCSI*STDFLR
Trigger: CCTTAGGAAGTCAGTGCTGCAGATAGAACAACTACA...ATGATTAGTCCACCTCAAGATGGACGAATGGCCCCCTGTGCCCGGAGAGTGTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000508428.5
ENST00000510715.5
CDS-3UTR GCA 90 bp GGAGATTCTCGCAGGGCCGGCTGCTATCTCAGACTTTGTAGTTGTTCTATCTGCGAGGACAGACGTCTATaGAGAAACATGGTGAACCTC +
Preference number: 4 (lower is better)
Translates to: GDSRRAGCYLRLCSCSICEDRRL*RNMVNL
Trigger: GAGGTTCACCATGTTTCTGCATAGACGTCTGTCCTC...GCAGATAGAACAACTACAAAGTCTGAGATAGCAGCCGGCCCTGCGAGAATCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510715.5
CDS-3UTR CCA 90 bp TGTAGTTGTTCTATCTGCAGCACTGACTTCCTAAGGGATTCTTCCAACCTAGAATACAGAACACCCAGTTaGCCATGCCAGGCGGGCGAC +
Preference number: 4 (lower is better)
Translates to: CSCSICSTDFLRDSSNLEYRTPS*PCQAGD
Trigger: GTCGCCCGCCTGGCATGGCCAACTGGGTGTTCTGTA...TTCTAGGTTGGAAGAATCCCTTAGGAAGTCAGTGCTGCAGATAGAACAACTACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506730.5
ENST00000508428.5
ENST00000510715.5
CDS-3UTR CCA 90 bp TTGTACCTCAGCATATATTGGAAGTGTTTTAGAGTTGGTGAGTTCCCCGTGCCTGTCCTGTGGGGCGGCTaGAAGCAGCGATTACAGAAC +
Preference number: 4 (lower is better)
Translates to: LYLSIYWKCFRVGEFPVPVLWGG*KQRLQN
Trigger: GTTCTGTAATCGCTGCTTCCAGCCGCCCCACAGGAC...AGGCACGGGGAACTCACCAACTCTAAAACACTTCCAATATATGCTGAGGTACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000508428.5
ENST00000510715.5
ENST00000511620.5
CDS-3UTR CCA 90 bp TACTGTACAATTCCAACTCCAGGAGAGTCTGAAAAAGGGACCGTAAAAAGATCAAAGCACGACGTCCTGTaGGGCGGCTGGAAGCAGCGA +
Preference number: 4 (lower is better)
Translates to: YCTIPTPGESEKGTVKRSKHDVL*GGWKQR
Trigger: TCGCTGCTTCCAGCCGCCCCACAGGACGTCGTGCTT...TGATCTTTTTACGGTCCCTTTTTCAGACTCTCCTGGAGTTGGAATTGTACAGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000382968.9
ENST00000433731.7
CDS-3UTR CCA 90 bp GTCTATGCTCATGAAGAATGCCTGGATATCTGCGTCGGTAGCGTGACTGAAGGCTCTGGGAGGTTTCCCTaGAGTACTTCTTACACAGAC +
Preference number: 4 (lower is better)
Translates to: VYAHEECLDICVGSVTEGSGRFP*STSYTD
Trigger: GTCTGTGTAAGAAGTACTCCAGGGAAACCTCCCAGA...GCCTTCAGTCACGCTACCGACGCAGATATCCAGGCATTCTTCATGAGCATAGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510715.5
CDS-3UTR CCA 90 bp AGTTGTTCTATCTGCAGCACTGACTTCCTAAGGGATTCTTCCAACCTAGAAATCGTGCCCTCAGCCTGCTaGAACGGAAACAAGACGGCC +
Preference number: 4 (lower is better)
Translates to: SCSICSTDFLRDSSNLEIVPSAC*NGNKTA
Trigger: GGCCGTCTTGTTTCCGTTCCAGCAGGCTGAGGGCAC...GATTTCTAGGTTGGAAGAATCCCTTAGGAAGTCAGTGCTGCAGATAGAACAACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508428.5
ENST00000510715.5
CDS-3UTR CCA 90 bp GGTGCCCTCAGCCTGCTGGAACGGAAACAAGACGGCCCTTTGTACCTCAGCATAGAGTCATGGTGTATATaGGAAATCTGTACCTTCCTT +
Preference number: 4 (lower is better)
Translates to: GALSLLERKQDGPLYLSIESWCI*EICTFL
Trigger: AAGGAAGGTACAGATTTCCCATATACACCATGACTC...TATGCTGAGGTACAAAGGGCCGTCTTGTTTCCGTTCCAGCAGGCTGAGGGCACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382968.9
CDS-3UTR CCA 90 bp CTGCTCTGGTGGAGGATGAGGATGATGGGGGAGCTGTGCGTGTGTGGAGTCATGGTAAACCATGGACGTTaGGTGATAATGATGTATTCA +
Preference number: 4 (lower is better)
Translates to: LLWWRMRMMGELCVCGVMVNHGR*VIMMYS
Trigger: TGAATACATCATTATCACCCAACGTCCATGGTTTAC...CATGACTCCACACACGCACAGCTCCCCCATCATCCTCATCCTCCACCAGAGCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000382968.9
ENST00000433731.7
CDS-3UTR CCA 90 bp ATGGAGATTCTCGCAGGGCCGGCTGCTATCTCAGATTTTCTAATCGGAGAAGGAGGGAATTTGCAGAGGTaGAATCCTGAGAGGCTTTCC +
Preference number: 4 (lower is better)
Translates to: MEILAGPAAISDFLIGEGGNLQR*NPERLS
Trigger: GGAAAGCCTCTCAGGATTCCACCTCTGCAAATTCCC...TCCTTCTCCGATTAGAAAATCTGAGATAGCAGCCGGCCCTGCGAGAATCTCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506730.5
CDS-3UTR TCA 90 bp GGAAGTGTTTTAGAGTTGGTGAGTTCCCCGTGCCTTCCAGAACTGAACGCTAGGTGCGTCGGTATGCTTTaGAAGCAAAACTGTACGACA +
Preference number: 4 (lower is better)
Translates to: GSVLELVSSPCLPELNARCVGML*KQNCTT
Trigger: TGTCGTACAGTTTTGCTTTCAAAGCATACCGACGCA...CCTAGCGTTCAGTTCTGGAAGGCACGGGGAACTCACCAACTCTAAAACACTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000511620.5
CDS-3UTR TCA 90 bp ACTAATCATGGAGATTCTCGCAGGGCCGGCTGCTATCTCAGACTTTGTAGTTGTGCCATTCGTCCATCTTaGGGTGGACTAATCATGGAG +
Preference number: 4 (lower is better)
Translates to: TNHGDSRRAGCYLRLCSCAIRPS*GGLIME
Trigger: CTCCATGATTAGTCCACCTCAAGATGGACGAATGGC...ACAACTACAAAGTCTGAGATAGCAGCCGGCCCTGCGAGAATCTCCATGATTAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510715.5
CDS-3UTR TCA 90 bp TCAGATTTTCTAATCGGAGAAGGAGAGAGATCAACTTCCATCGACTCCAGTTTGAGGAGGAGCAGCCAGTaGGGACAGACGTCTATGCAG +
Preference number: 4 (lower is better)
Translates to: SDFLIGEGERSTSIDSSLRRSSQ*GQTSMQ
Trigger: CTGCATAGACGTCTGTCCTCACTGGCTGCTCCTCCT...CAAACTGGAGTCGATGGAAGTTGATCTCTCTCCTTCTCCGATTAGAAAATCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508428.5
CDS-3UTR TCA 90 bp GATGATCTCATACTTTGTAGTTGTTCTATCTGCAGCACTGACTTCCTAAGGGATCGTGCCTTCCAGAACTaGACGCTAGGAGGAGCAGCC +
Preference number: 4 (lower is better)
Translates to: DDLILCSCSICSTDFLRDRAFQN*TLGGAA
Trigger: GGCTGCTCCTCCTAGCGTTCAGTTCTGGAAGGCACG...ATCCCTTAGGAAGTCAGTGCTGCAGATAGAACAACTACAAAGTATGAGATCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508428.5
CDS-3UTR TCA 90 bp AGAACACTGACATCATCAAATGTGAGGACGTGGAGCAACAGGAACTCTCATTCGCACCCTCTCACCATCTaGTCCAGCATTCACACTCCT +
Preference number: 4 (lower is better)
Translates to: RTLTSSNVRTWSNRNSHSHPLTI*SSIHTP
Trigger: AGGAGTGTGAATGCTGGATCAGATGGTGAGAGGGTG...CGAATGAGAGTTCCTGTTGCTCCACGTCCTCACATTTGATGATGTCAGTGTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382968.9
ENST00000433731.7
CDS-3UTR GCA 90 bp GGAGCAGCCAGTGAGGACAGACGTCTATGCAGAAACATGGTGAACCTCTGGAAATATGCTCATGAAGAATaGCTGGATATCTGCGTCGGT +
Preference number: 4 (lower is better)
Translates to: GAASEDRRLCRNMVNLWKYAHEE*LDICVG
Trigger: ACCGACGCAGATATCCAGGCATTCTTCATGAGCATA...TTTCCAGAGGTTCACCATGTTTCTGCATAGACGTCTGTCCTCACTGGCTGCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000508428.5
ENST00000510715.5
ENST00000511620.5
CDS-3UTR GCA 90 bp AATGACACACTCTCCGGGCACAGGGGGCTTAGACAAGGTCAACCATGGGATGAATGTAGTTGTTCTATCTaGAGCACTGACTTCCTAAGG +
Preference number: 4 (lower is better)
Translates to: NDTLSGHRGLRQGQPWDECSCSI*STDFLR
Trigger: CCTTAGGAAGTCAGTGCTGCAGATAGAACAACTACA...TTCATCCCATGGTTGACCTTGTCTAAGCCCCCTGTGCCCGGAGAGTGTGTCATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511620.5
CDS-3UTR GCA 90 bp GAGGTTTCCCTGGAGTACTTCTTACACAGACTGTCTATGCTCATGAAGAATGCCTTGGTGAGTTCCCCGTaGCTTCCAGAACTGAACGCT +
Preference number: 4 (lower is better)
Translates to: EVSLEYFLHRLSMLMKNALVSSP*LPELNA
Trigger: AGCGTTCAGTTCTGGAAGGCACGGGGAACTCACCAA...GGCATTCTTCATGAGCATAGACAGTCTGTGTAAGAAGTACTCCAGGGAAACCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510715.5
CDS-3UTR GCA 90 bp TGCCCTCAGCCTGCTGGAACGGAAACAAGACGGCCCTTTGTACCTCAGCATATAAAAAGGTTAATATCCTaGACACTGAGGGCTTCCACA +
Preference number: 4 (lower is better)
Translates to: CPQPAGTETRRPFVPQHIKRLIS*TLRAST
Trigger: TGTGGAAGCCCTCAGTGTGCAGGATATTAACCTTTT...TATATGCTGAGGTACAAAGGGCCGTCTTGTTTCCGTTCCAGCAGGCTGAGGGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000382968.9
CDS-3UTR CCA 90 bp CTTTGTAGTTGTTCTATCTGCAGCACTGACTTCCTAAGGGATTCTTCCAACCTAGTCCTGTGGGGCGGCTaGAAGCAGCGATTACAGAAC +
Preference number: 4 (lower is better)
Translates to: LCSCSICSTDFLRDSSNLVLWGG*KQRLQN
Trigger: GTTCTGTAATCGCTGCTTCCAGCCGCCCCACAGGAC...TAGGTTGGAAGAATCCCTTAGGAAGTCAGTGCTGCAGATAGAACAACTACAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000506730.5
ENST00000508428.5
ENST00000510715.5
CDS-3UTR CCA 90 bp TCTTCCTGTGTTTTTCTTGAAATTCTAAAATCTGGGAGGTTTCCCTGGAGTACTAAGCACGACGTCCTGTaGGGCGGCTGGAAGCAGCGA +
Preference number: 4 (lower is better)
Translates to: SSCVFLEILKSGRFPWSTKHDVL*GGWKQR
Trigger: TCGCTGCTTCCAGCCGCCCCACAGGACGTCGTGCTT...AGTACTCCAGGGAAACCTCCCAGATTTTAGAATTTCAAGAAAAACACAGGAAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000506730.5
ENST00000508428.5
ENST00000510715.5
CDS-3UTR CCA 90 bp TGGAAGCAACCAAGATGCCCTTCAGTAGGTGAATGGATGAACTATGATACATCCCATGGACTGCTCTGGTaGAGGATGAGGATGATGGGG +
Preference number: 4 (lower is better)
Translates to: WKQPRCPSVGEWMNYDTSHGLLW*RMRMMG
Trigger: CCCCATCATCCTCATCCTCCACCAGAGCAGTCCATG...GGATGTATCATAGTTCATCCATTCACCTACTGAAGGGCATCTTGGTTGCTTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382968.9
ENST00000433731.7
CDS-3UTR CCA 90 bp GGAGGAGACGCTGCCCATTCGTCCATCTTGAGGTGGACTAATCATGGAGATTCTCTCATGAAGAATGCCTaGATATCTGCGTCGGTCTTT +
Preference number: 4 (lower is better)
Translates to: GGDAAHSSILRWTNHGDSLMKNA*ISASVF
Trigger: AAAGACCGACGCAGATATCCAGGCATTCTTCATGAG...AGAATCTCCATGATTAGTCCACCTCAAGATGGACGAATGGGCAGCGTCTCCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506730.5
CDS-3UTR CCA 90 bp GAGGTTTCCCTGGAGTACTTCTTACACAGACTGTCTATGCTCATGAAGAATGCCGGAGGAAATCAACCCTaGTGCAGAGCAATCGAGTCC +
Preference number: 4 (lower is better)
Translates to: EVSLEYFLHRLSMLMKNAGGNQP*CRAIES
Trigger: GGACTCGATTGCTCTGCACCAGGGTTGATTTCCTCC...GGCATTCTTCATGAGCATAGACAGTCTGTGTAAGAAGTACTCCAGGGAAACCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510715.5
3UTR CAA 72 bp GCCCTCAGCCTGCTGGAACGGAAACAAGACGGCCCTTaGTACCTCAGCATATATTGGAAGTGTTTTAGAGTT +
Preference number: 4 (lower is better)
Translates to: ALSLLERKQDGP*YLSIYWKCFRV
Trigger: AACTCTAAAACACTTCCAATATATGCTGAGGTACAAAGGGCCGTCTTGTTTCCGTTCCAGCAGGCTGAGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000508428.5
ENST00000510715.5
ENST00000511620.5
CDS-3UTR TCA 90 bp GATTCTCGCAGGGCCGGCTGCTATCTCAGATTTTCTAATCGGAGAAGGAGAGAGTATGCAGAAACATGGTaGACCTCTGGAAATGACACA +
Preference number: 4 (lower is better)
Translates to: DSRRAGCYLRFSNRRRREYAETW*TSGNDT
Trigger: TGTGTCATTTCCAGAGGTTCACCATGTTTCTGCATA...CTCTCTCCTTCTCCGATTAGAAAATCTGAGATAGCAGCCGGCCCTGCGAGAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508428.5
CDS-3UTR TCA 90 bp TACTGTACAATTCCAACTCCAGGAGAGTCTGAAAAAGGGACCGTAAAAAGATCAAGGAGGAGCAGCCAGTaGGGACAGACGTCTATGCAG +
Preference number: 4 (lower is better)
Translates to: YCTIPTPGESEKGTVKRSRRSSQ*GQTSMQ
Trigger: CTGCATAGACGTCTGTCCTCACTGGCTGCTCCTCCT...TGATCTTTTTACGGTCCCTTTTTCAGACTCTCCTGGAGTTGGAATTGTACAGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000382968.9
ENST00000433731.7
CDS-3UTR TCA 90 bp GATGGGGGAGCTGTGCGTGTGTGGAGTCATGGTGTATATGGGAAATCTGTACCTAGGTCAACCATGGGATaGAACAGAAAGAAGCTGTTA +
Preference number: 4 (lower is better)
Translates to: DGGAVRVWSHGVYGKSVPRSTMG*NRKKLL
Trigger: TAACAGCTTCTTTCTGTTTCATCCCATGGTTGACCT...AGGTACAGATTTCCCATATACACCATGACTCCACACACGCACAGCTCCCCCATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000433731.7
CDS-3UTR TCA 90 bp GATGATCTCATACTTTGTAGTTGTTCTATCTGCAGCACTGACTTCCTAAGGGATTTTCCCATGCTCCTCTaGCTCGTTGTCAGGCCGGGA +
Preference number: 4 (lower is better)
Translates to: DDLILCSCSICSTDFLRDFPMLL*LVVRPG
Trigger: TCCCGGCCTGACAACGAGTCAGAGGAGCATGGGAAA...ATCCCTTAGGAAGTCAGTGCTGCAGATAGAACAACTACAAAGTATGAGATCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506730.5
CDS-3UTR GCA 90 bp GCAAAGAGGAAACACAACAGACACAGCGGGTGTTCTGAACGTGTCCAGGGTGCCATATCTGCGTCGGTATaGTTTGAAAGCAAAACTGTA +
Preference number: 4 (lower is better)
Translates to: AKRKHNRHSGCSERVQGAISASV*FESKTV
Trigger: TACAGTTTTGCTTTCAAAGCATACCGACGCAGATAT...GGCACCCTGGACACGTTCAGAACACCCGCTGTGTCTGTTGTGTTTCCTCTTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382968.9
ENST00000511620.5
CDS-3UTR GCA 90 bp ATGGAGATTCTCGCAGGGCCGGCTGCTATCTCAGATTTTCTAATCGGAGAAGGATATGCTCATGAAGAATaGCTGGATATCTGCGTCGGT +
Preference number: 4 (lower is better)
Translates to: MEILAGPAAISDFLIGEGYAHEE*LDICVG
Trigger: ACCGACGCAGATATCCAGGCATTCTTCATGAGCATA...TCCTTCTCCGATTAGAAAATCTGAGATAGCAGCCGGCCCTGCGAGAATCTCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506730.5
ENST00000508428.5
CDS-3UTR GCA 90 bp TTGTACCTCAGCATATATTGGAAGTGTTTTAGAGTTGGTGAGTTCCCCGTGCCTTTGGTGAGTTCCCCGTaGCTTCCAGAACTGAACGCT +
Preference number: 4 (lower is better)
Translates to: LYLSIYWKCFRVGEFPVPLVSSP*LPELNA
Trigger: AGCGTTCAGTTCTGGAAGGCACGGGGAACTCACCAA...AGGCACGGGGAACTCACCAACTCTAAAACACTTCCAATATATGCTGAGGTACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000508428.5
ENST00000510715.5
ENST00000511620.5
CDS-3UTR GCA 90 bp AGTTGTTCTATCTGCAGCACTGACTTCCTAAGGGATTCTTCCAACCTAGAAATCGAATGCCTGGATATCTaGGTCGGTCTTTGCCGAGGC +
Preference number: 4 (lower is better)
Translates to: SCSICSTDFLRDSSNLEIECLDI*VGLCRG
Trigger: GCCTCGGCAAAGACCGACGCAGATATCCAGGCATTC...GATTTCTAGGTTGGAAGAATCCCTTAGGAAGTCAGTGCTGCAGATAGAACAACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506730.5
ENST00000508428.5
CDS-3UTR GCA 90 bp ATCTGGGAGGTTTCCCTGGAGTACTTCTTACACAGACTGTCTATGCTCATGAAGGAATGCCTGGATATCTaGGTCGGTAGCGTGACTGAA +
Preference number: 4 (lower is better)
Translates to: IWEVSLEYFLHRLSMLMKECLDI*VGSVTE
Trigger: TTCAGTCACGCTACCGACGCAGATATCCAGGCATTC...CTTCATGAGCATAGACAGTCTGTGTAAGAAGTACTCCAGGGAAACCTCCCAGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510715.5
CDS-3UTR CCA 90 bp TGTTGTGATGATCTCATACTTTGTAGTTGTTCTATCTGCAGCACTGACTTCCTATACAGAACACCCAGTTaGCCATGCCAGGCGGGCGAC +
Preference number: 4 (lower is better)
Translates to: CCDDLILCSCSICSTDFLYRTPS*PCQAGD
Trigger: GTCGCCCGCCTGGCATGGCCAACTGGGTGTTCTGTA...TAGGAAGTCAGTGCTGCAGATAGAACAACTACAAAGTATGAGATCATCACAACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506730.5
ENST00000508428.5
CDS-3UTR CCA 90 bp AGATTTTCTAATCGGAGAAGGAGAGAGATCAACTTCCATCGACTCCAGTTTGAAGTCCTGTGGGGCGGCTaGAAGCAGCGATTACAGAAC +
Preference number: 4 (lower is better)
Translates to: RFSNRRRREINFHRLQFEVLWGG*KQRLQN
Trigger: GTTCTGTAATCGCTGCTTCCAGCCGCCCCACAGGAC...TTCAAACTGGAGTCGATGGAAGTTGATCTCTCTCCTTCTCCGATTAGAAAATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508428.5
CDS-3UTR CCA 90 bp GGAGGAGACGCTGCCCATTCGTCCATCTTGAGGTGGACTAATCATGGAGATTCTTCGTCCATCTTGAGGTaGACTAATCATGGAGATTCT +
Preference number: 4 (lower is better)
Translates to: GGDAAHSSILRWTNHGDSSSILR*TNHGDS
Trigger: AGAATCTCCATGATTAGTCCACCTCAAGATGGACGA...AGAATCTCCATGATTAGTCCACCTCAAGATGGACGAATGGGCAGCGTCTCCTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506730.5
CDS-3UTR CCA 90 bp TGCCCTCAGCCTGCTGGAACGGAAACAAGACGGCCCTTTGTACCTCAGCATATACCTTCAGTAGGTGAATaGATGAACTATGATACATCC +
Preference number: 4 (lower is better)
Translates to: CPQPAGTETRRPFVPQHIPSVGE*MNYDTS
Trigger: GGATGTATCATAGTTCATCCATTCACCTACTGAAGG...TATATGCTGAGGTACAAAGGGCCGTCTTGTTTCCGTTCCAGCAGGCTGAGGGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382968.9
CDS-3UTR CCA 90 bp ACCTCAGCATATATTGGAAGTGTTTTAGAGTTGGTGAGTTCCCCGTGCCTTCCACTCATGAAGAATGCCTaGATATCTGCGTCGGTAGCG +
Preference number: 4 (lower is better)
Translates to: TSAYIGSVLELVSSPCLPLMKNA*ISASVA
Trigger: CGCTACCGACGCAGATATCCAGGCATTCTTCATGAG...TGGAAGGCACGGGGAACTCACCAACTCTAAAACACTTCCAATATATGCTGAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510715.5
CDS-3UTR TCA 90 bp CTCAGATTTTCTAATCGGAGAAGGAGAGAGATCAACTTCCATCGACTCCAGTCTCCCATTCGTCCATCTTaGGGTGGACTAATCATGGAG +
Preference number: 4 (lower is better)
Translates to: LRFSNRRRREINFHRLQSPIRPS*GGLIME
Trigger: CTCCATGATTAGTCCACCTCAAGATGGACGAATGGG...AGACTGGAGTCGATGGAAGTTGATCTCTCTCCTTCTCCGATTAGAAAATCTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506730.5
CDS-3UTR TCA 90 bp TGTACCTCAGCATATATTGGAAGTGTTTTAGAGTTGGTGAGTTCCCCGTGCCTTCCCATTCGTCCATCTTaGGGTGGACTAATCATGGAG +
Preference number: 4 (lower is better)
Translates to: CTSAYIGSVLELVSSPCLPIRPS*GGLIME
Trigger: CTCCATGATTAGTCCACCTCAAGATGGACGAATGGG...AAGGCACGGGGAACTCACCAACTCTAAAACACTTCCAATATATGCTGAGGTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511620.5
CDS-3UTR GCA 90 bp GAAAGGAGTCAATCTGAGAAGCCACATACTGTACAATTCCAACTCCAGGAGAGTCATTCTTTTTACCTTTaGCGAGGCAGGCGTCGCAGT +
Preference number: 4 (lower is better)
Translates to: ERSQSEKPHTVQFQLQESHSFYL*RGRRRS
Trigger: ACTGCGACGCCTGCCTCGGCAAAGGTAAAAAGAATG...ACTCTCCTGGAGTTGGAATTGTACAGTATGTGGCTTCTCAGATTGACTCCTTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000382968.9
ENST00000433731.7
CDS-3UTR GCA 90 bp TCAAATTGGCAAAGAGGAAACACAACAGACACAGCGGGTGTTCTGAACGTGTCCTATGCTCATGAAGAATaGCTGGATATCTGCGTCGGT +
Preference number: 4 (lower is better)
Translates to: SNWQRGNTTDTAGVLNVSYAHEE*LDICVG
Trigger: ACCGACGCAGATATCCAGGCATTCTTCATGAGCATA...GGACACGTTCAGAACACCCGCTGTGTCTGTTGTGTTTCCTCTTTGCCAATTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382968.9
ENST00000508428.5
ENST00000511620.5
CDS-3UTR GCA 90 bp CTTTCAAAACTAAACACCCTCTCACCATCTGATCCAGCATTCACACTCCTTAGTTTGGTGAGTTCCCCGTaGCTTCCAGAACTGAACGCT +
Preference number: 4 (lower is better)
Translates to: LSKLNTLSPSDPAFTLLSLVSSP*LPELNA
Trigger: AGCGTTCAGTTCTGGAAGGCACGGGGAACTCACCAA...ACTAAGGAGTGTGAATGCTGGATCAGATGGTGAGAGGGTGTTTAGTTTTGAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382968.9
ENST00000433731.7
CDS-3UTR CCA 90 bp TGGCCAAAATCCAGAACACTGACATCATCAAATGTGAGGACGTGGAGCAACAGGGTCTACACAAAACCCTaGCACATGGACATCTATAGC +
Preference number: 4 (lower is better)
Translates to: WPKSRTLTSSNVRTWSNRVYTKP*HMDIYS
Trigger: GCTATAGATGTCCATGTGCCAGGGTTTTGTGTAGAC...CCTGTTGCTCCACGTCCTCACATTTGATGATGTCAGTGTTCTGGATTTTGGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382968.9
ENST00000433731.7
CDS-3UTR CCA 90 bp TTCTTACACAGACTGTCTATGCTCATGAAGAATGCCTGGATATCTGCGTCGGTAAGAGGGCGTAAGGAATaGAGGAAATCAACCCTGGTG +
Preference number: 4 (lower is better)
Translates to: FLHRLSMLMKNAWISASVRGRKE*RKSTLV
Trigger: CACCAGGGTTGATTTCCTCCATTCCTTACGCCCTCT...TACCGACGCAGATATCCAGGCATTCTTCATGAGCATAGACAGTCTGTGTAAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510715.5
CDS-3UTR TCA 90 bp GGTGTATATGGGAAATCTGTACCTTCCTTTCAATTTTTCTGTGAACCTAAAACTACACAGCGGGTGTTCTaGACGTGTCCAGGGTGCCCT +
Preference number: 4 (lower is better)
Translates to: GVYGKSVPSFQFFCEPKTTQRVF*TCPGCP
Trigger: AGGGCACCCTGGACACGTTCAGAACACCCGCTGTGT...AGTTTTAGGTTCACAGAAAAATTGAAAGGAAGGTACAGATTTCCCATATACACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000382968.9
ENST00000433731.7
CDS-3UTR TCA 90 bp AGAACACTGACATCATCAAATGTGAGGACGTGGAGCAACAGGAACTCTCATTCGAACTCCAGGAGAGTCTaGAAAAGGGACCGTAAAAAG +
Preference number: 4 (lower is better)
Translates to: RTLTSSNVRTWSNRNSHSNSRRV*KRDRKK
Trigger: CTTTTTACGGTCCCTTTTTCAGACTCTCCTGGAGTT...CGAATGAGAGTTCCTGTTGCTCCACGTCCTCACATTTGATGATGTCAGTGTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000382968.9
ENST00000433731.7
CDS-3UTR GCA 90 bp TCACCATCTGATCCAGCATTCACACTCCTTAGTATTTACCCAAAGGAGCTGAAACATTCTTTTTACCTTTaGCGAGGCAGGCGTCGCAGT +
Preference number: 4 (lower is better)
Translates to: SPSDPAFTLLSIYPKELKHSFYL*RGRRRS
Trigger: ACTGCGACGCCTGCCTCGGCAAAGGTAAAAAGAATG...TTTCAGCTCCTTTGGGTAAATACTAAGGAGTGTGAATGCTGGATCAGATGGTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000382968.9
ENST00000433731.7
CDS-3UTR GCA 90 bp TGGCCAAAATCCAGAACACTGACATCATCAAATGTGAGGACGTGGAGCAACAGGAAAAGGTTAATATCCTaGACACTGAGGGCTTCCACA +
Preference number: 4 (lower is better)
Translates to: WPKSRTLTSSNVRTWSNRKRLIS*TLRAST
Trigger: TGTGGAAGCCCTCAGTGTGCAGGATATTAACCTTTT...CCTGTTGCTCCACGTCCTCACATTTGATGATGTCAGTGTTCTGGATTTTGGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382968.9
ENST00000433731.7
CDS-3UTR CCA 90 bp ATTGGAAGTGTTTTAGAGTTGGTGAGTTCCCCGTGCCTTCCAGAACTGAACGCTTCGTCCATCTTGAGGTaGACTAATCATGGAGATTCT +
Preference number: 4 (lower is better)
Translates to: IGSVLELVSSPCLPELNASSILR*TNHGDS
Trigger: AGAATCTCCATGATTAGTCCACCTCAAGATGGACGA...AGCGTTCAGTTCTGGAAGGCACGGGGAACTCACCAACTCTAAAACACTTCCAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000508428.5
ENST00000510715.5
ENST00000511620.5
CDS-3UTR CCA 90 bp TCAAATTGGCAAAGAGGAAACACAACAGACACAGCGGGTGTTCTGAACGTGTCCATCAGTTTTAACACATaGACTGCTCTGGTGGAGGAT +
Preference number: 4 (lower is better)
Translates to: SNWQRGNTTDTAGVLNVSISFNT*TALVED
Trigger: ATCCTCCACCAGAGCAGTCCATGTGTTAAAACTGAT...GGACACGTTCAGAACACCCGCTGTGTCTGTTGTGTTTCCTCTTTGCCAATTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382968.9
CDS-3UTR CCA 90 bp ATCAGCTGGCCAAAATCCAGAACACTGACATCATCAAATGTGAGGACGTGGAGCAGGATTTTTAGGGTGTaGCACTATTCCATATGCTGC +
Preference number: 4 (lower is better)
Translates to: ISWPKSRTLTSSNVRTWSRIFRV*HYSICC
Trigger: GCAGCATATGGAATAGTGCCACACCCTAAAAATCCT...GCTCCACGTCCTCACATTTGATGATGTCAGTGTTCTGGATTTTGGCCAGCTGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000382968.9
ENST00000433731.7
CDS-3UTR CCA 90 bp TCAAATTGGCAAAGAGGAAACACAACAGACACAGCGGGTGTTCTGAACGTGTCCAAGCTGCTGCCACTTTaGAAGGTAGTTTGGCAATTT +
Preference number: 4 (lower is better)
Translates to: SNWQRGNTTDTAGVLNVSKLLPL*KVVWQF
Trigger: AAATTGCCAAACTACCTTCCAAAGTGGCAGCAGCTT...GGACACGTTCAGAACACCCGCTGTGTCTGTTGTGTTTCCTCTTTGCCAATTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382968.9
CDS-3UTR CCA 90 bp TGGCCAAAATCCAGAACACTGACATCATCAAATGTGAGGACGTGGAGCAACAGGAAGCTGCTGCCACTTTaGAAGGTAGTTTGGCAATTT +
Preference number: 4 (lower is better)
Translates to: WPKSRTLTSSNVRTWSNRKLLPL*KVVWQF
Trigger: AAATTGCCAAACTACCTTCCAAAGTGGCAGCAGCTT...CCTGTTGCTCCACGTCCTCACATTTGATGATGTCAGTGTTCTGGATTTTGGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382968.9
ENST00000433731.7
CDS-3UTR TCA 90 bp TCTATCTGCAGCACTGACTTCCTAAGGGATTCTTCCAACCTAGAAATCTTTTCTGCCATTCGTCCATCTTaGGGTGGACTAATCATGGAG +
Preference number: 4 (lower is better)
Translates to: SICSTDFLRDSSNLEIFSAIRPS*GGLIME
Trigger: CTCCATGATTAGTCCACCTCAAGATGGACGAATGGC...AGAAAAGATTTCTAGGTTGGAAGAATCCCTTAGGAAGTCAGTGCTGCAGATAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508428.5
ENST00000510715.5
CDS-3UTR TCA 90 bp GGGGGCTTAGACAAGGTCAACCATGGGATGAAACAGAAAGAAGCTGTTAGATGTTATGCAGAAACATGGTaGACCTCTGGAAATGACACA +
Preference number: 4 (lower is better)
Translates to: GGLDKVNHGMKQKEAVRCYAETW*TSGNDT
Trigger: TGTGTCATTTCCAGAGGTTCACCATGTTTCTGCATA...ACATCTAACAGCTTCTTTCTGTTTCATCCCATGGTTGACCTTGTCTAAGCCCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511620.5
CDS-3UTR GCA 90 bp CTTTGTAGTTGTTCTATCTGCAGCACTGACTTCCTAAGGGATTCTTCCAACCTATCTCGCAGGGCCGGCTaGTATCTCAGATTTTCTAAT +
Preference number: 4 (lower is better)
Translates to: LCSCSICSTDFLRDSSNLSRRAG*YLRFSN
Trigger: ATTAGAAAATCTGAGATAGCAGCCGGCCCTGCGAGA...TAGGTTGGAAGAATCCCTTAGGAAGTCAGTGCTGCAGATAGAACAACTACAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506730.5
ENST00000508428.5
CDS-3UTR GCA 90 bp TCACCATCTGATCCAGCATTCACACTCCTTAGTATTTACCCAAAGGAGCTGAAAGAGGACAGACGTCTATaGAGAAACATGGTGAACCTC +
Preference number: 4 (lower is better)
Translates to: SPSDPAFTLLSIYPKELKEDRRL*RNMVNL
Trigger: GAGGTTCACCATGTTTCTGCATAGACGTCTGTCCTC...TTTCAGCTCCTTTGGGTAAATACTAAGGAGTGTGAATGCTGGATCAGATGGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382968.9
ENST00000433731.7
CDS-3UTR GCA 90 bp ATATATTGGAAGTGTTTTAGAGTTGGTGAGTTCCCCGTGCCTTCCAGAACTGAAGAGGACAGACGTCTATaGAGAAACATGGTGAACCTC +
Preference number: 4 (lower is better)
Translates to: IYWKCFRVGEFPVPSRTEEDRRL*RNMVNL
Trigger: GAGGTTCACCATGTTTCTGCATAGACGTCTGTCCTC...TTCAGTTCTGGAAGGCACGGGGAACTCACCAACTCTAAAACACTTCCAATATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000508428.5
ENST00000510715.5
ENST00000511620.5
CDS-3UTR GCA 90 bp TCTTCCTGTGTTTTTCTTGAAATTCTAAAATCTGGGAGGTTTCCCTGGAGTACTTTGGTGAGTTCCCCGTaGCTTCCAGAACTGAACGCT +
Preference number: 4 (lower is better)
Translates to: SSCVFLEILKSGRFPWSTLVSSP*LPELNA
Trigger: AGCGTTCAGTTCTGGAAGGCACGGGGAACTCACCAA...AGTACTCCAGGGAAACCTCCCAGATTTTAGAATTTCAAGAAAAACACAGGAAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000508428.5
ENST00000510715.5
CDS-3UTR GCA 90 bp GGTGTATATGGGAAATCTGTACCTTCCTTTCAATTTTTCTGTGAACCTAAAACTAGGGTGCCCTCAGCCTaGTGGAACGGAAACAAGACG +
Preference number: 4 (lower is better)
Translates to: GVYGKSVPSFQFFCEPKTRVPSA*WNGNKT
Trigger: CGTCTTGTTTCCGTTCCAGCAGGCTGAGGGCACCCT...AGTTTTAGGTTCACAGAAAAATTGAAAGGAAGGTACAGATTTCCCATATACACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000382968.9
ENST00000433731.7
CDS-3UTR GCA 90 bp GAAAGGAGTCAATCTGAGAAGCCACATACTGTACAATTCCAACTCCAGGAGAGTCACTATTCCATATGCTaGTACGATGGGGACACATGT +
Preference number: 4 (lower is better)
Translates to: ERSQSEKPHTVQFQLQESHYSIC*YDGDTC
Trigger: ACATGTGTCCCCATCGTAGCAGCATATGGAATAGTG...ACTCTCCTGGAGTTGGAATTGTACAGTATGTGGCTTCTCAGATTGACTCCTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382968.9
ENST00000433731.7
CDS-3UTR CCA 90 bp CTTTCAAAACTAAACACCCTCTCACCATCTGATCCAGCATTCACACTCCTTAGTCTCATGAAGAATGCCTaGATATCTGCGTCGGTATGC +
Preference number: 4 (lower is better)
Translates to: LSKLNTLSPSDPAFTLLSLMKNA*ISASVC
Trigger: GCATACCGACGCAGATATCCAGGCATTCTTCATGAG...ACTAAGGAGTGTGAATGCTGGATCAGATGGTGAGAGGGTGTTTAGTTTTGAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382968.9
ENST00000433731.7
CDS-3UTR CCA 90 bp TCACCATCTGATCCAGCATTCACACTCCTTAGTATTTACCCAAAGGAGCTGAAACTCATGAAGAATGCCTaGATATCTGCGTCGGTATGC +
Preference number: 4 (lower is better)
Translates to: SPSDPAFTLLSIYPKELKLMKNA*ISASVC
Trigger: GCATACCGACGCAGATATCCAGGCATTCTTCATGAG...TTTCAGCTCCTTTGGGTAAATACTAAGGAGTGTGAATGCTGGATCAGATGGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382968.9
ENST00000433731.7
CDS-3UTR CCA 90 bp TGGAAGCAACCAAGATGCCCTTCAGTAGGTGAATGGATGAACTATGATACATCCGCGTGTGTGGAGTCATaGTGTATATGGGAAATCTGT +
Preference number: 4 (lower is better)
Translates to: WKQPRCPSVGEWMNYDTSACVES*CIWEIC
Trigger: ACAGATTTCCCATATACACCATGACTCCACACACGC...GGATGTATCATAGTTCATCCATTCACCTACTGAAGGGCATCTTGGTTGCTTCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382968.9
ENST00000433731.7
CDS-3UTR CCA 90 bp TACTGTACAATTCCAACTCCAGGAGAGTCTGAAAAAGGGACCGTAAAAAGATCAACACATGGACTGCTCTaGTGGAGGATGAGGATGATG +
Preference number: 4 (lower is better)
Translates to: YCTIPTPGESEKGTVKRSTHGLL*WRMRMM
Trigger: CATCATCCTCATCCTCCACCAGAGCAGTCCATGTGT...TGATCTTTTTACGGTCCCTTTTTCAGACTCTCCTGGAGTTGGAATTGTACAGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000382968.9
ENST00000433731.7
CDS-3UTR CCA 90 bp GAAAGGAGTCAATCTGAGAAGCCACATACTGTACAATTCCAACTCCAGGAGAGTGTCTACACAAAACCCTaGCACATGGACATCTATAGC +
Preference number: 4 (lower is better)
Translates to: ERSQSEKPHTVQFQLQESVYTKP*HMDIYS
Trigger: GCTATAGATGTCCATGTGCCAGGGTTTTGTGTAGAC...ACTCTCCTGGAGTTGGAATTGTACAGTATGTGGCTTCTCAGATTGACTCCTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382968.9
ENST00000433731.7
CDS-3UTR TCA 90 bp TGTGGAGTCATGGTGTATATGGGAAATCTGTACCTTCCTTTCAATTTTTCTGTGGCCATTCGTCCATCTTaGGGTGGACTAATCATGGAG +
Preference number: 4 (lower is better)
Translates to: CGVMVYMGNLYLPFNFSVAIRPS*GGLIME
Trigger: CTCCATGATTAGTCCACCTCAAGATGGACGAATGGC...CACAGAAAAATTGAAAGGAAGGTACAGATTTCCCATATACACCATGACTCCACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000382968.9
CDS-3UTR TCA 90 bp TGGCCAAAATCCAGAACACTGACATCATCAAATGTGAGGACGTGGAGCAACAGGTTTACCCAAAGGAGCTaGAAACATGTCTACACAAAA +
Preference number: 4 (lower is better)
Translates to: WPKSRTLTSSNVRTWSNRFTQRS*KHVYTK
Trigger: TTTTGTGTAGACATGTTTTCAGCTCCTTTGGGTAAA...CCTGTTGCTCCACGTCCTCACATTTGATGATGTCAGTGTTCTGGATTTTGGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382968.9
ENST00000433731.7
CDS-3UTR TCA 90 bp CTTTGTAGTTGTTCTATCTGCAGCACTGACTTCCTAAGGGATTCTTCCAACCTAAAAGGGGCGATGCTTTaGAAGCAAAACTGTACGACA +
Preference number: 4 (lower is better)
Translates to: LCSCSICSTDFLRDSSNLKGAML*KQNCTT
Trigger: TGTCGTACAGTTTTGCTTTCAAAGCATCGCCCCTTT...TAGGTTGGAAGAATCCCTTAGGAAGTCAGTGCTGCAGATAGAACAACTACAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000510715.5
CDS-3UTR GCA 90 bp ATTGGAAGTGTTTTAGAGTTGGTGAGTTCCCCGTGCCTTCCAGAACTGAACGCTATATCTGCGTCGGTATaGTTTGAAAGCAAAACTGTA +
Preference number: 4 (lower is better)
Translates to: IGSVLELVSSPCLPELNAISASV*FESKTV
Trigger: TACAGTTTTGCTTTCAAAGCATACCGACGCAGATAT...AGCGTTCAGTTCTGGAAGGCACGGGGAACTCACCAACTCTAAAACACTTCCAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000511620.5
CDS-3UTR GCA 90 bp TCACCATCTGATCCAGCATTCACACTCCTTAGTATTTACCCAAAGGAGCTGAAATATGCTCATGAAGAATaGCTGGATATCTGCGTCGGT +
Preference number: 4 (lower is better)
Translates to: SPSDPAFTLLSIYPKELKYAHEE*LDICVG
Trigger: ACCGACGCAGATATCCAGGCATTCTTCATGAGCATA...TTTCAGCTCCTTTGGGTAAATACTAAGGAGTGTGAATGCTGGATCAGATGGTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382968.9
ENST00000433731.7
CDS-3UTR GCA 90 bp ATGAAATGCAAAATAAAACAGCAAGATACCACTACATACCTATCAGCTGGCCAATTGGTGAGTTCCCCGTaGCTTCCAGAACTGAACGCT +
Preference number: 4 (lower is better)
Translates to: MKCKIKQQDTTTYLSAGQLVSSP*LPELNA
Trigger: AGCGTTCAGTTCTGGAAGGCACGGGGAACTCACCAA...TTGGCCAGCTGATAGGTATGTAGTGGTATCTTGCTGTTTTATTTTGCATTTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000382968.9
ENST00000433731.7
CDS-3UTR CCA 90 bp TTCTTACACAGACTGTCTATGCTCATGAAGAATGCCTGGATATCTGCGTCGGTATCGTCCATCTTGAGGTaGACTAATCATGGAGATTCT +
Preference number: 4 (lower is better)
Translates to: FLHRLSMLMKNAWISASVSSILR*TNHGDS
Trigger: AGAATCTCCATGATTAGTCCACCTCAAGATGGACGA...TACCGACGCAGATATCCAGGCATTCTTCATGAGCATAGACAGTCTGTGTAAGAA
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510715.5
CDS-3UTR CCA 90 bp TGGAAGCAACCAAGATGCCCTTCAGTAGGTGAATGGATGAACTATGATACATCCATCAGTTTTAACACATaGACTGCTCTGGTGGAGGAT +
Preference number: 4 (lower is better)
Translates to: WKQPRCPSVGEWMNYDTSISFNT*TALVED
Trigger: ATCCTCCACCAGAGCAGTCCATGTGTTAAAACTGAT...GGATGTATCATAGTTCATCCATTCACCTACTGAAGGGCATCTTGGTTGCTTCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382968.9
ENST00000433731.7
CDS-3UTR TCA 90 bp TACTGTACAATTCCAACTCCAGGAGAGTCTGAAAAAGGGACCGTAAAAAGATCATGCGTCGGTATGCTTTaGAAGCAAAACTGTACGACA +
Preference number: 4 (lower is better)
Translates to: YCTIPTPGESEKGTVKRSCVGML*KQNCTT
Trigger: TGTCGTACAGTTTTGCTTTCAAAGCATACCGACGCA...TGATCTTTTTACGGTCCCTTTTTCAGACTCTCCTGGAGTTGGAATTGTACAGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000382968.9
ENST00000433731.7
CDS-3UTR TCA 90 bp TACTGTACAATTCCAACTCCAGGAGAGTCTGAAAAAGGGACCGTAAAAAGATCATTCTATCTGCAGCACTaGCTTCCTAAGGGATTCTTC +
Preference number: 4 (lower is better)
Translates to: YCTIPTPGESEKGTVKRSFYLQH*LPKGFF
Trigger: GAAGAATCCCTTAGGAAGTCAGTGCTGCAGATAGAA...TGATCTTTTTACGGTCCCTTTTTCAGACTCTCCTGGAGTTGGAATTGTACAGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000382968.9
ENST00000433731.7
CDS-3UTR TCA 90 bp TCACCATCTGATCCAGCATTCACACTCCTTAGTATTTACCCAAAGGAGCTGAAATATGCAGAAACATGGTaGACCTCTGGAAATGACACA +
Preference number: 4 (lower is better)
Translates to: SPSDPAFTLLSIYPKELKYAETW*TSGNDT
Trigger: TGTGTCATTTCCAGAGGTTCACCATGTTTCTGCATA...TTTCAGCTCCTTTGGGTAAATACTAAGGAGTGTGAATGCTGGATCAGATGGTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382968.9
ENST00000433731.7
CDS-3UTR TCA 90 bp AGAACACTGACATCATCAAATGTGAGGACGTGGAGCAACAGGAACTCTCATTCGTTTACCCAAAGGAGCTaGAAACATGTCTACACAAAA +
Preference number: 4 (lower is better)
Translates to: RTLTSSNVRTWSNRNSHSFTQRS*KHVYTK
Trigger: TTTTGTGTAGACATGTTTTCAGCTCCTTTGGGTAAA...CGAATGAGAGTTCCTGTTGCTCCACGTCCTCACATTTGATGATGTCAGTGTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382968.9
ENST00000433731.7
CDS-3UTR TCA 90 bp GGTGTATATGGGAAATCTGTACCTTCCTTTCAATTTTTCTGTGAACCTAAAACTCACCCTCTCACCATCTaGTCCAGCATTCACACTCCT +
Preference number: 4 (lower is better)
Translates to: GVYGKSVPSFQFFCEPKTHPLTI*SSIHTP
Trigger: AGGAGTGTGAATGCTGGATCAGATGGTGAGAGGGTG...AGTTTTAGGTTCACAGAAAAATTGAAAGGAAGGTACAGATTTCCCATATACACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000382968.9
ENST00000433731.7
CDS-3UTR GCA 90 bp CTTTCAAAACTAAACACCCTCTCACCATCTGATCCAGCATTCACACTCCTTAGTTGTAGTTGTTCTATCTaGAGCACTGACTTCCTAAGG +
Preference number: 4 (lower is better)
Translates to: LSKLNTLSPSDPAFTLLSCSCSI*STDFLR
Trigger: CCTTAGGAAGTCAGTGCTGCAGATAGAACAACTACA...ACTAAGGAGTGTGAATGCTGGATCAGATGGTGAGAGGGTGTTTAGTTTTGAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382968.9
ENST00000433731.7
CDS-3UTR GCA 90 bp TGTGGAGTCATGGTGTATATGGGAAATCTGTACCTTCCTTTCAATTTTTCTGTGTCTCGCAGGGCCGGCTaGTATCTCAGATTTTCTAAT +
Preference number: 4 (lower is better)
Translates to: CGVMVYMGNLYLPFNFSVSRRAG*YLRFSN
Trigger: ATTAGAAAATCTGAGATAGCAGCCGGCCCTGCGAGA...CACAGAAAAATTGAAAGGAAGGTACAGATTTCCCATATACACCATGACTCCACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000382968.9
ENST00000433731.7
CDS-3UTR CCA 90 bp AGATTTTCTAATCGGAGAAGGAGAGAGATCAACTTCCATCGACTCCAGTTTGAACTCATGAAGAATGCCTaGATATCTGCGTCGGTCTTT +
Preference number: 4 (lower is better)
Translates to: RFSNRRRREINFHRLQFELMKNA*ISASVF
Trigger: AAAGACCGACGCAGATATCCAGGCATTCTTCATGAG...TTCAAACTGGAGTCGATGGAAGTTGATCTCTCTCCTTCTCCGATTAGAAAATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508428.5
3UTR CAA 72 bp TCGTTGCTAGTGGGAATGCGAAAAGCTGCTGCCACTTaGGAAGGTAGTTTGGCAATTTCTTTCAAAACTAAA +
Preference number: 4 (lower is better)
Translates to: SLLVGMRKAAAT*EGSLAISFKTK
Trigger: TTTAGTTTTGAAAGAAATTGCCAAACTACCTTCCAAAGTGGCAGCAGCTTTTCGCATTCCCACTAGCAACGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382968.9
ENST00000433731.7
CDS-3UTR TCA 90 bp TGTGGAGTCATGGTGTATATGGGAAATCTGTACCTTCCTTTCAATTTTTCTGTGTGCGTCGGTATGCTTTaGAAGCAAAACTGTACGACA +
Preference number: 4 (lower is better)
Translates to: CGVMVYMGNLYLPFNFSVCVGML*KQNCTT
Trigger: TGTCGTACAGTTTTGCTTTCAAAGCATACCGACGCA...CACAGAAAAATTGAAAGGAAGGTACAGATTTCCCATATACACCATGACTCCACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000382968.9
ENST00000433731.7
CDS-3UTR TCA 90 bp TGTGGAGTCATGGTGTATATGGGAAATCTGTACCTTCCTTTCAATTTTTCTGTGAACTCCAGGAGAGTCTaGAAAAGGGACCGTAAAAAG +
Preference number: 4 (lower is better)
Translates to: CGVMVYMGNLYLPFNFSVNSRRV*KRDRKK
Trigger: CTTTTTACGGTCCCTTTTTCAGACTCTCCTGGAGTT...CACAGAAAAATTGAAAGGAAGGTACAGATTTCCCATATACACCATGACTCCACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000382968.9
ENST00000433731.7
CDS-3UTR CCA 90 bp ATGAAATGCAAAATAAAACAGCAAGATACCACTACATACCTATCAGCTGGCCAATCTGGGAGGTTTCCCTaGAGTACTTCTTACACAGAC +
Preference number: 4 (lower is better)
Translates to: MKCKIKQQDTTTYLSAGQSGRFP*STSYTD
Trigger: GTCTGTGTAAGAAGTACTCCAGGGAAACCTCCCAGA...TTGGCCAGCTGATAGGTATGTAGTGGTATCTTGCTGTTTTATTTTGCATTTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382968.9
ENST00000433731.7
CDS-3UTR CCA 90 bp TCACCATCTGATCCAGCATTCACACTCCTTAGTATTTACCCAAAGGAGCTGAAACCTTCAGTAGGTGAATaGATGAACTATGATACATCC +
Preference number: 4 (lower is better)
Translates to: SPSDPAFTLLSIYPKELKPSVGE*MNYDTS
Trigger: GGATGTATCATAGTTCATCCATTCACCTACTGAAGG...TTTCAGCTCCTTTGGGTAAATACTAAGGAGTGTGAATGCTGGATCAGATGGTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382968.9
ENST00000433731.7
CDS-3UTR CCA 90 bp TACTGTACAATTCCAACTCCAGGAGAGTCTGAAAAAGGGACCGTAAAAAGATCATACATACCTATCAGCTaGCCAAAATCCAGAACACTG +
Preference number: 4 (lower is better)
Translates to: YCTIPTPGESEKGTVKRSYIPIS*PKSRTL
Trigger: CAGTGTTCTGGATTTTGGCCAGCTGATAGGTATGTA...TGATCTTTTTACGGTCCCTTTTTCAGACTCTCCTGGAGTTGGAATTGTACAGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000382968.9
ENST00000433731.7
CDS-3UTR TCA 90 bp ATGAAATGCAAAATAAAACAGCAAGATACCACTACATACCTATCAGCTGGCCAATTCTATCTGCAGCACTaGCTTCCTAAGGGATTCTTC +
Preference number: 4 (lower is better)
Translates to: MKCKIKQQDTTTYLSAGQFYLQH*LPKGFF
Trigger: GAAGAATCCCTTAGGAAGTCAGTGCTGCAGATAGAA...TTGGCCAGCTGATAGGTATGTAGTGGTATCTTGCTGTTTTATTTTGCATTTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382968.9
ENST00000433731.7
CDS-3UTR TCA 90 bp TGTGGAGTCATGGTGTATATGGGAAATCTGTACCTTCCTTTCAATTTTTCTGTGTATGCAGAAACATGGTaGACCTCTGGAAATGACACA +
Preference number: 4 (lower is better)
Translates to: CGVMVYMGNLYLPFNFSVYAETW*TSGNDT
Trigger: TGTGTCATTTCCAGAGGTTCACCATGTTTCTGCATA...CACAGAAAAATTGAAAGGAAGGTACAGATTTCCCATATACACCATGACTCCACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000382968.9
ENST00000433731.7
CDS-3UTR TCA 90 bp TCTTCCTGTGTTTTTCTTGAAATTCTAAAATCTGGGAGGTTTCCCTGGAGTACTTATGCAGAAACATGGTaGACCTCTGGAAATGACACA +
Preference number: 4 (lower is better)
Translates to: SSCVFLEILKSGRFPWSTYAETW*TSGNDT
Trigger: TGTGTCATTTCCAGAGGTTCACCATGTTTCTGCATA...AGTACTCCAGGGAAACCTCCCAGATTTTAGAATTTCAAGAAAAACACAGGAAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000508428.5
ENST00000510715.5
CDS-3UTR GCA 90 bp TCTTCCTGTGTTTTTCTTGAAATTCTAAAATCTGGGAGGTTTCCCTGGAGTACTTGTAGTTGTTCTATCTaGAGCACTGACTTCCTAAGG +
Preference number: 4 (lower is better)
Translates to: SSCVFLEILKSGRFPWSTCSCSI*STDFLR
Trigger: CCTTAGGAAGTCAGTGCTGCAGATAGAACAACTACA...AGTACTCCAGGGAAACCTCCCAGATTTTAGAATTTCAAGAAAAACACAGGAAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000506730.5
ENST00000508428.5
ENST00000510715.5
CDS-3UTR CCA 90 bp ATGAAATGCAAAATAAAACAGCAAGATACCACTACATACCTATCAGCTGGCCAAGCGTGTGTGGAGTCATaGTGTATATGGGAAATCTGT +
Preference number: 4 (lower is better)
Translates to: MKCKIKQQDTTTYLSAGQACVES*CIWEIC
Trigger: ACAGATTTCCCATATACACCATGACTCCACACACGC...TTGGCCAGCTGATAGGTATGTAGTGGTATCTTGCTGTTTTATTTTGCATTTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382968.9
ENST00000433731.7
CDS-3UTR CCA 90 bp TGTGGAGTCATGGTGTATATGGGAAATCTGTACCTTCCTTTCAATTTTTCTGTGAGGATTTTTAGGGTGTaGCACTATTCCATATGCTGC +
Preference number: 4 (lower is better)
Translates to: CGVMVYMGNLYLPFNFSVRIFRV*HYSICC
Trigger: GCAGCATATGGAATAGTGCCACACCCTAAAAATCCT...CACAGAAAAATTGAAAGGAAGGTACAGATTTCCCATATACACCATGACTCCACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000382968.9
ENST00000433731.7
CDS-3UTR GCA 90 bp TACTGTACAATTCCAACTCCAGGAGAGTCTGAAAAAGGGACCGTAAAAAGATCAATATCTGCGTCGGTATaGTTTGAAAGCAAAACTGTA +
Preference number: 4 (lower is better)
Translates to: YCTIPTPGESEKGTVKRSISASV*FESKTV
Trigger: TACAGTTTTGCTTTCAAAGCATACCGACGCAGATAT...TGATCTTTTTACGGTCCCTTTTTCAGACTCTCCTGGAGTTGGAATTGTACAGTA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000382968.9
ENST00000433731.7
CDS-3UTR GCA 90 bp CTTTCAAAACTAAACACCCTCTCACCATCTGATCCAGCATTCACACTCCTTAGTAGCTTAATTCATAATTaGCAAAACTTGGAAGCAACC +
Preference number: 4 (lower is better)
Translates to: LSKLNTLSPSDPAFTLLSSLIHN*QNLEAT
Trigger: GGTTGCTTCCAAGTTTTGGCAATTATGAATTAAGCT...ACTAAGGAGTGTGAATGCTGGATCAGATGGTGAGAGGGTGTTTAGTTTTGAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382968.9
ENST00000433731.7
CDS-3UTR CCA 90 bp ATGAAATGCAAAATAAAACAGCAAGATACCACTACATACCTATCAGCTGGCCAATCGTCCATCTTGAGGTaGACTAATCATGGAGATTCT +
Preference number: 4 (lower is better)
Translates to: MKCKIKQQDTTTYLSAGQSSILR*TNHGDS
Trigger: AGAATCTCCATGATTAGTCCACCTCAAGATGGACGA...TTGGCCAGCTGATAGGTATGTAGTGGTATCTTGCTGTTTTATTTTGCATTTCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382968.9
ENST00000433731.7
CDS-3UTR CCA 90 bp ATGAAATGCAAAATAAAACAGCAAGATACCACTACATACCTATCAGCTGGCCAAGAGTCATGGTGTATATaGGAAATCTGTACCTTCCTT +
Preference number: 4 (lower is better)
Translates to: MKCKIKQQDTTTYLSAGQESWCI*EICTFL
Trigger: AAGGAAGGTACAGATTTCCCATATACACCATGACTC...TTGGCCAGCTGATAGGTATGTAGTGGTATCTTGCTGTTTTATTTTGCATTTCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382968.9
ENST00000433731.7
CDS-3UTR CCA 90 bp ATGAAATGCAAAATAAAACAGCAAGATACCACTACATACCTATCAGCTGGCCAAGTAAACCATGGACGTTaGGTGATAATGATGTATTCA +
Preference number: 4 (lower is better)
Translates to: MKCKIKQQDTTTYLSAGQVNHGR*VIMMYS
Trigger: TGAATACATCATTATCACCCAACGTCCATGGTTTAC...TTGGCCAGCTGATAGGTATGTAGTGGTATCTTGCTGTTTTATTTTGCATTTCAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382968.9
ENST00000433731.7
CDS-3UTR GCA 90 bp ATGAAATGCAAAATAAAACAGCAAGATACCACTACATACCTATCAGCTGGCCAAAGCTTAATTCATAATTaGCAAAACTTGGAAGCAACC +
Preference number: 4 (lower is better)
Translates to: MKCKIKQQDTTTYLSAGQSLIHN*QNLEAT
Trigger: GGTTGCTTCCAAGTTTTGGCAATTATGAATTAAGCT...TTGGCCAGCTGATAGGTATGTAGTGGTATCTTGCTGTTTTATTTTGCATTTCAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000382968.9
ENST00000433731.7
CDS GCA 90 bp TGTGGGGCGGCTGGAAGCAGCGATTACAGAACACCCAGTTGGCCATaGCAGGCGGGCGACCGCAGCGGCGAGGCCGGGCCCACGCGAAGC +
Preference number: 5 (lower is better)
Translates to: CGAAGSSDYRTPSWP*QAGDRSGEAGPTRS
Trigger: GCTTCGCGTGGGCCCGGCCTCGCCGCTGCGGTCGCCCGCCTGGCATGGCCAACTGGGTGTTCTGTAATCGCTGCTTCCAGCCGCCCCACA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000333673.5
ENST00000382968.9
ENST00000433731.7
ENST00000454487.6
ENST00000505730.1
ENST00000506730.5
ENST00000508428.5
ENST00000510715.5
ENST00000511620.5
CDS CCA 90 bp ACGTCCTGTGGGGCGGCTGGAAGCAGCGATTACAGAACACCCAGTTaGCCATGCCAGGCGGGCGACCGCAGCGGCGAGGCCGGGCCCACG +
Preference number: 5 (lower is better)
Translates to: TSCGAAGSSDYRTPS*PCQAGDRSGEAGPT
Trigger: CGTGGGCCCGGCCTCGCCGCTGCGGTCGCCCGCCTGGCATGGCCAACTGGGTGTTCTGTAATCGCTGCTTCCAGCCGCCCCACAGGACGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000333673.5
ENST00000382968.9
ENST00000433731.7
ENST00000454487.6
ENST00000505730.1
ENST00000506730.5
ENST00000508428.5
ENST00000510715.5
ENST00000511620.5
CDS GCA 90 bp GGGGCCACGAGGTCACTGGGCAGAGCCTGTGACCTCCACGGCCCATaGCGGAAGCCTGAGAGGCACGAGAGGCAGAGCAGACAGGTGGCT +
Preference number: 5 (lower is better)
Translates to: GATRSLGRACDLHGP*RKPERHERQSRQVA
Trigger: AGCCACCTGTCTGCTCTGCCTCTCGTGCCTCTCAGGCTTCCGGCATGGGCCGTGGAGGTCACAGGCTCTGCCCAGTGACCTCGTGGCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333673.5
CDS CCA 90 bp GCCCATGCCGGAAGCCTGAGAGGCACGAGAGGCAGAGCAGACAGGTaGCTGGAGGGGCTGGCCGGGTCTGCTGGGTCTTCTCTCCTGAGA +
Preference number: 5 (lower is better)
Translates to: AHAGSLRGTRGRADR*LEGLAGSAGSSLLR
Trigger: TCTCAGGAGAGAAGACCCAGCAGACCCGGCCAGCCCCTCCAGCCACCTGTCTGCTCTGCCTCTCGTGCCTCTCAGGCTTCCGGCATGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333673.5
CDS GCA 90 bp GCACGAAGGCTGGAGGACTGGAAGGGGGCAGAGCGGGTGGCTGGGTaGTCATCTTTCAGGTGTCACTGCCCCAAGGTGAGCAGGTCCCGC +
Preference number: 5 (lower is better)
Translates to: ARRLEDWKGAERVAG*SSFRCHCPKVSRSR
Trigger: GCGGGACCTGCTCACCTTGGGGCAGTGACACCTGAAAGATGAGCACCCAGCCACCCGCTCTGCCCCCTTCCAGTCCTCCAGCCTTCGTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000503206.5
ENST00000505693.5
ENST00000514024.5
ENST00000514757.5
CDS GCA 90 bp GGATATCTGCGTCGGTCTTTGCCGAGGCAGGCGTCGCAGTACACGTaGCCGCAGTTGGTGAGGCTGAAGCACGACGTCCTGTGGGGCGGC +
Preference number: 5 (lower is better)
Translates to: GYLRRSLPRQASQYT*PQLVRLKHDVLWGG
Trigger: GCCGCCCCACAGGACGTCGTGCTTCAGCCTCACCAACTGCGGGCACGTGTACTGCGACGCCTGCCTCGGCAAAGACCGACGCAGATATCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506730.5
ENST00000508428.5
CDS GCA 90 bp AAGGGGGCAGAGCGGGTGGCTGGGTGCTCATCTTTCAGGTGTCACTaGCCCAAGGTGAGCAGGTCCCGCAGGAGGCATGGAAGTCGCGGT +
Preference number: 5 (lower is better)
Translates to: KGAERVAGCSSFRCH*PKVSRSRRRHGSRG
Trigger: ACCGCGACTTCCATGCCTCCTGCGGGACCTGCTCACCTTGGGGCAGTGACACCTGAAAGATGAGCACCCAGCCACCCGCTCTGCCCCCTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000503206.5
ENST00000505693.5
ENST00000514024.5
ENST00000514757.5
CDS CCA 90 bp TGCCCGCAGTTGGTGAGGCTGAAGCACGACGTCCTGTGGGGCGGCTaGAAGCAGCGATTACAGAACACCCAGTTGGCCATGCCAGGCGGG +
Preference number: 5 (lower is better)
Translates to: CPQLVRLKHDVLWGG*KQRLQNTQLAMPGG
Trigger: CCCGCCTGGCATGGCCAACTGGGTGTTCTGTAATCGCTGCTTCCAGCCGCCCCACAGGACGTCGTGCTTCAGCCTCACCAACTGCGGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000333673.5
ENST00000382968.9
ENST00000433731.7
ENST00000454487.6
ENST00000505730.1
ENST00000506730.5
ENST00000508428.5
ENST00000510715.5
ENST00000511620.5
CDS CCA 90 bp GTGGGCACGAAGGCTGGAGGACTGGAAGGGGGCAGAGCGGGTGGCTaGGTGCTCATCTTTCAGGTGTCACTGCCCCAAGGTGAGCAGGTC +
Preference number: 5 (lower is better)
Translates to: VGTKAGGLEGGRAGG*VLIFQVSLPQGEQV
Trigger: GACCTGCTCACCTTGGGGCAGTGACACCTGAAAGATGAGCACCCAGCCACCCGCTCTGCCCCCTTCCAGTCCTCCAGCCTTCGTGCCCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000503206.5
ENST00000505693.5
ENST00000514024.5
ENST00000514757.5
CDS TCA 90 bp GGCTCTGGGACCGCCGGCATCCTGGTCTGGGTGCCCGTGTTGTGCTaGCCCAGTGTTCTTGGGGATCTCTGGCTGCTGCTTGGCTTCCAT +
Preference number: 5 (lower is better)
Translates to: GSGTAGILVWVPVLC*PSVLGDLWLLLGFH
Trigger: ATGGAAGCCAAGCAGCAGCCAGAGATCCCCAAGAACACTGGGTCAGCACAACACGGGCACCCAGACCAGGATGCCGGCGGTCCCAGAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333673.5
CDS CCA 90 bp CAGTACACGTGCCCGCAGTTGGTGAGGCTGAAGCACGACGTCCTGTaGGGCGGCTGGAAGCAGCGATTACAGAACACCCAGTTGGCCATG +
Preference number: 5 (lower is better)
Translates to: QYTCPQLVRLKHDVL*GGWKQRLQNTQLAM
Trigger: CATGGCCAACTGGGTGTTCTGTAATCGCTGCTTCCAGCCGCCCCACAGGACGTCGTGCTTCAGCCTCACCAACTGCGGGCACGTGTACTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000333673.5
ENST00000382968.9
ENST00000433731.7
ENST00000454487.6
ENST00000505730.1
ENST00000506730.5
ENST00000508428.5
ENST00000510715.5
ENST00000511620.5
CDS CCA 90 bp CTGACCCAGTGTTCTTGGGGATCTCTGGCTGCTGCTTGGCTTCCATaGGTCGAGCCTCTGGGCACCTCCTTGGAGGATGTGGCTGGGCAT +
Preference number: 5 (lower is better)
Translates to: LTQCSWGSLAAAWLP*VEPLGTSLEDVAGH
Trigger: ATGCCCAGCCACATCCTCCAAGGAGGTGCCCAGAGGCTCGACCCATGGAAGCCAAGCAGCAGCCAGAGATCCCCAAGAACACTGGGTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333673.5
CDS CCA 90 bp GGCTGTCTAACGTACACATGCTGGTGGGCACGAAGGCTGGAGGACTaGAAGGGGGCAGAGCGGGTGGCTGGGTGCTCATCTTTCAGGTGT +
Preference number: 5 (lower is better)
Translates to: GCLTYTCWWARRLED*KGAERVAGCSSFRC
Trigger: ACACCTGAAAGATGAGCACCCAGCCACCCGCTCTGCCCCCTTCCAGTCCTCCAGCCTTCGTGCCCACCAGCATGTGTACGTTAGACAGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000503206.5
ENST00000505693.5
ENST00000514024.5
ENST00000514757.5
CDS CCA 90 bp GAGGGAAAGTACAGTCGCACTGGCTGTCTAACGTACACATGCTGGTaGGCACGAAGGCTGGAGGACTGGAAGGGGGCAGAGCGGGTGGCT +
Preference number: 5 (lower is better)
Translates to: EGKYSRTGCLTYTCW*ARRLEDWKGAERVA
Trigger: AGCCACCCGCTCTGCCCCCTTCCAGTCCTCCAGCCTTCGTGCCCACCAGCATGTGTACGTTAGACAGCCAGTGCGACTGTACTTTCCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000503206.5
ENST00000505693.5
ENST00000514024.5
ENST00000514757.5
CDS GCA 90 bp CATTCATTCTTTTTACCTTTGCCGAGGCAGGCGTCGCAGTACACGTaGCCGCAGTTGGTGAGGCTGAAGCACGACGTCCTGTGGGGCGGC +
Preference number: 5 (lower is better)
Translates to: HSFFLPLPRQASQYT*PQLVRLKHDVLWGG
Trigger: GCCGCCCCACAGGACGTCGTGCTTCAGCCTCACCAACTGCGGGCACGTGTACTGCGACGCCTGCCTCGGCAAAGGTAAAAAGAATGAATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000333673.5
ENST00000382968.9
ENST00000433731.7
ENST00000454487.6
ENST00000505730.1
ENST00000510715.5
ENST00000511620.5
CDS CCA 90 bp CAAGAGGGAAAGTACAGTCGCACTGGCTGTCTAACGTACACATGCTaGTGGGCACGAAGGCTGGAGGACTGGAAGGGGGCAGAGCGGGTG +
Preference number: 5 (lower is better)
Translates to: QEGKYSRTGCLTYTC*WARRLEDWKGAERV
Trigger: CACCCGCTCTGCCCCCTTCCAGTCCTCCAGCCTTCGTGCCCACCAGCATGTGTACGTTAGACAGCCAGTGCGACTGTACTTTCCCTCTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000503206.5
ENST00000505693.5
ENST00000514024.5
ENST00000514757.5
CDS-3UTR CAA 90 bp GTCTATGCTCATGAAGAATGCCTGGATATCTGCGTCGGTAGCGTGACTGAAGGCGAAGCCCACGCAAGGTaGGGACCAGCCTCCCCGCGC +
Preference number: 5 (lower is better)
Translates to: VYAHEECLDICVGSVTEGEAHAR*GPASPR
Trigger: GCGCGGGGAGGCTGGTCCCAACCTTGCGTGGGCTTC...GCCTTCAGTCACGCTACCGACGCAGATATCCAGGCATTCTTCATGAGCATAGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510715.5
CDS GCA 90 bp CAACAAGAGGGAAAGTACAGTCGCACTGGCTGTCTAACGTACACATaGTGGTGGGCACGAAGGCTGGAGGACTGGAAGGGGGCAGAGCGG +
Preference number: 5 (lower is better)
Translates to: QQEGKYSRTGCLTYT*WWARRLEDWKGAER
Trigger: CCGCTCTGCCCCCTTCCAGTCCTCCAGCCTTCGTGCCCACCAGCATGTGTACGTTAGACAGCCAGTGCGACTGTACTTTCCCTCTTGTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000503206.5
ENST00000505693.5
ENST00000514024.5
ENST00000514757.5
CDS-3UTR CAA 90 bp AGGAAACACAACAGACACAGCGGGTGTTCTGAACGTGTCCAGGGTGCCCTCAGCTTACAGAACACCCAGTaGGCCATGCCAGGCGGGCGA +
Preference number: 5 (lower is better)
Translates to: RKHNRHSGCSERVQGALSLQNTQ*AMPGGR
Trigger: TCGCCCGCCTGGCATGGCCAACTGGGTGTTCTGTAA...GCTGAGGGCACCCTGGACACGTTCAGAACACCCGCTGTGTCTGTTGTGTTTCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382968.9
ENST00000508428.5
ENST00000511620.5
CDS GCA 90 bp GTCATCATGGCAGAGGGCGTAAGGAATGGAGGAAATCAACCCTGGTaGAGAGCAATCGAGTCCACAAGGTCCGACGGCGCAAGCGGACAC +
Preference number: 5 (lower is better)
Translates to: VIMAEGVRNGGNQPW*RAIESTRSDGASGH
Trigger: GTGTCCGCTTGCGCCGTCGGACCTTGTGGACTCGATTGCTCTGCACCAGGGTTGATTTCCTCCATTCCTTACGCCCTCTGCCATGATGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510715.5
ENST00000512552.1
CDS CCA 90 bp GACGTCATCATGGCAGAGGGCGTAAGGAATGGAGGAAATCAACCCTaGTGCAGAGCAATCGAGTCCACAAGGTCCGACGGCGCAAGCGGA +
Preference number: 5 (lower is better)
Translates to: DVIMAEGVRNGGNQP*CRAIESTRSDGASG
Trigger: TCCGCTTGCGCCGTCGGACCTTGTGGACTCGATTGCTCTGCACCAGGGTTGATTTCCTCCATTCCTTACGCCCTCTGCCATGATGACGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510715.5
ENST00000512552.1
CDS-3UTR CAA 90 bp CAAAGAGGAAACACAACAGACACAGCGGGTGTTCTGAACGTGTCCAGGGTGCCCTTACAGAACACCCAGTaGGCCATGCCAGGCGGGCGA +
Preference number: 5 (lower is better)
Translates to: QRGNTTDTAGVLNVSRVPLQNTQ*AMPGGR
Trigger: TCGCCCGCCTGGCATGGCCAACTGGGTGTTCTGTAA...GGGCACCCTGGACACGTTCAGAACACCCGCTGTGTCTGTTGTGTTTCCTCTTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382968.9
ENST00000508428.5
ENST00000511620.5
CDS-3UTR CAA 90 bp CATTCGTCCATCTTGAGGTGGACTAATCATGGAGATTCTCGCAGGGCCGGCTGCTTACAGAACACCCAGTaGGCCATGCCAGGCGGGCGA +
Preference number: 5 (lower is better)
Translates to: HSSILRWTNHGDSRRAGCLQNTQ*AMPGGR
Trigger: TCGCCCGCCTGGCATGGCCAACTGGGTGTTCTGTAA...GCAGCCGGCCCTGCGAGAATCTCCATGATTAGTCCACCTCAAGATGGACGAATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506730.5
ENST00000508428.5
ENST00000510715.5
CDS-3UTR CAA 90 bp GTGCCCTCAGCCTGCTGGAACGGAAACAAGACGGCCCTTTGTACCTCAGCATATTACACGTGCCCGCAGTaGGTGAGGCTGAAGCACGAC +
Preference number: 5 (lower is better)
Translates to: VPSACWNGNKTALCTSAYYTCPQ*VRLKHD
Trigger: GTCGTGCTTCAGCCTCACCAACTGCGGGCACGTGTA...ATATGCTGAGGTACAAAGGGCCGTCTTGTTTCCGTTCCAGCAGGCTGAGGGCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382968.9
ENST00000508428.5
ENST00000510715.5
ENST00000511620.5
CDS-3UTR CAA 90 bp GGGTCCCTTGTAGGGAATTTGCAGAGGTGGAATCCTGAGAGGCTTTCCCATGCTTGCTCCTCTGACTCGTaGTCAGGCCGGGATGCTCGG +
Preference number: 5 (lower is better)
Translates to: GSLVGNLQRWNPERLSHACSSDS*SGRDAR
Trigger: CCGAGCATCCCGGCCTGACAACGAGTCAGAGGAGCA...AGCATGGGAAAGCCTCTCAGGATTCCACCTCTGCAAATTCCCTACAAGGGACCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506730.5
CDS-3UTR CAA 90 bp TGGCAAAGAGGAAACACAACAGACACAGCGGGTGTTCTGAACGTGTCCAGGGTGTATCTGCGTCGGTCTTaGCCGAGGCAGGCGTCGCAG +
Preference number: 5 (lower is better)
Translates to: WQRGNTTDTAGVLNVSRVYLRRS*PRQASQ
Trigger: CTGCGACGCCTGCCTCGGCAAAGACCGACGCAGATA...CACCCTGGACACGTTCAGAACACCCGCTGTGTCTGTTGTGTTTCCTCTTTGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508428.5
CDS TCA 90 bp CCTGTGAGTCGCACGGCCCTGCTCCTCCCTAGCGCTGAAGCCAAGTaGACTCAACACCCCACTGCCATTTACATCACTGGCTCTTACAAC +
Preference number: 5 (lower is better)
Translates to: PVSRTALLLPSAEAK*TQHPTAIYITGSYN
Trigger: GTTGTAAGAGCCAGTGATGTAAATGGCAGTGGGGTGTTGAGTTCACTTGGCTTCAGCGCTAGGGAGGAGCAGGGCCGTGCGACTCACAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505693.5
ENST00000514757.5
CDS-3UTR CAA 90 bp TGGCAAAGAGGAAACACAACAGACACAGCGGGTGTTCTGAACGTGTCCAGGGTGTACACGTGCCCGCAGTaGGTGAGGCTGAAGCACGAC +
Preference number: 5 (lower is better)
Translates to: WQRGNTTDTAGVLNVSRVYTCPQ*VRLKHD
Trigger: GTCGTGCTTCAGCCTCACCAACTGCGGGCACGTGTA...CACCCTGGACACGTTCAGAACACCCGCTGTGTCTGTTGTGTTTCCTCTTTGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382968.9
ENST00000508428.5
ENST00000511620.5
CDS-3UTR CAA 90 bp TGTCCAGGGTGCCCTCAGCCTGCTGGAACGGAAACAAGACGGCCCTTTGTACCTTCATTCTTTTTACCTTaGCCGAGGCAGGCGTCGCAG +
Preference number: 5 (lower is better)
Translates to: CPGCPQPAGTETRRPFVPSFFLP*PRQASQ
Trigger: CTGCGACGCCTGCCTCGGCAAAGGTAAAAAGAATGA...AGGTACAAAGGGCCGTCTTGTTTCCGTTCCAGCAGGCTGAGGGCACCCTGGACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000382968.9
ENST00000510715.5
ENST00000511620.5
CDS TCA 90 bp GCAAACGGCATTTCACATGAATTCAGCAGTTCCCATAGCGTCCTGTaGGTCGCACGGCCCTGCTCCTCCCTAGCGCTGAAGCCAAGTGAA +
Preference number: 5 (lower is better)
Translates to: ANGISHEFSSSHSVL*VARPCSSLALKPSE
Trigger: TTCACTTGGCTTCAGCGCTAGGGAGGAGCAGGGCCGTGCGACTCACAGGACGCTATGGGAACTGCTGAATTCATGTGAAATGCCGTTTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505693.5
ENST00000514757.5
CDS-3UTR CAA 90 bp AGGGTGCCCTCAGCCTGCTGGAACGGAAACAAGACGGCCCTTTGTACCTCAGCAGGAAGTGTTTTAGAGTaGGTGAGTTCCCCGTGCCTT +
Preference number: 5 (lower is better)
Translates to: RVPSACWNGNKTALCTSAGSVLE*VSSPCL
Trigger: AAGGCACGGGGAACTCACCAACTCTAAAACACTTCC...TGCTGAGGTACAAAGGGCCGTCTTGTTTCCGTTCCAGCAGGCTGAGGGCACCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382968.9
ENST00000508428.5
ENST00000510715.5
ENST00000511620.5
CDS-3UTR CAA 90 bp ATGGAGATTCTCGCAGGGCCGGCTGCTATCTCAGATTTTCTAATCGGAGAAGGATACACGTGCCCGCAGTaGGTGAGGCTGAAGCACGAC +
Preference number: 5 (lower is better)
Translates to: MEILAGPAAISDFLIGEGYTCPQ*VRLKHD
Trigger: GTCGTGCTTCAGCCTCACCAACTGCGGGCACGTGTA...TCCTTCTCCGATTAGAAAATCTGAGATAGCAGCCGGCCCTGCGAGAATCTCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506730.5
ENST00000508428.5
CDS-3UTR CAA 90 bp GCAAAGAGGAAACACAACAGACACAGCGGGTGTTCTGAACGTGTCCAGGGTGCCTCATTCTTTTTACCTTaGCCGAGGCAGGCGTCGCAG +
Preference number: 5 (lower is better)
Translates to: AKRKHNRHSGCSERVQGASFFLP*PRQASQ
Trigger: CTGCGACGCCTGCCTCGGCAAAGGTAAAAAGAATGA...GGCACCCTGGACACGTTCAGAACACCCGCTGTGTCTGTTGTGTTTCCTCTTTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000382968.9
ENST00000511620.5
CDS-3UTR CAA 90 bp CCACTACATACCTATCAGCTGGCCAAAATCCAGAACACTGACATCATCAAATGTGAAGCCCACGCAAGGTaGGGACCAGCCTCCCCGCGC +
Preference number: 5 (lower is better)
Translates to: PLHTYQLAKIQNTDIIKCEAHAR*GPASPR
Trigger: GCGCGGGGAGGCTGGTCCCAACCTTGCGTGGGCTTC...ACATTTGATGATGTCAGTGTTCTGGATTTTGGCCAGCTGATAGGTATGTAGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382968.9
ENST00000433731.7
CDS-3UTR CAA 90 bp TGTAGTTGTTCTATCTGCAGCACTGACTTCCTAAGGGATTCTTCCAACCTAGAAGAAGCCCACGCAAGGTaGGGACCAGCCTCCCCGCGC +
Preference number: 5 (lower is better)
Translates to: CSCSICSTDFLRDSSNLEEAHAR*GPASPR
Trigger: GCGCGGGGAGGCTGGTCCCAACCTTGCGTGGGCTTC...TTCTAGGTTGGAAGAATCCCTTAGGAAGTCAGTGCTGCAGATAGAACAACTACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506730.5
ENST00000510715.5
CDS-3UTR CAA 90 bp GATTCTCGCAGGGCCGGCTGCTATCTCAGATTTTCTAATCGGAGAAGGAGAGAGCTGGTAACTGTGGTGTaGGCGTTAGTGGGGGTCCCT +
Preference number: 5 (lower is better)
Translates to: DSRRAGCYLRFSNRRRRELVTVV*ALVGVP
Trigger: AGGGACCCCCACTAACGCCAACACCACAGTTACCAG...CTCTCTCCTTCTCCGATTAGAAAATCTGAGATAGCAGCCGGCCCTGCGAGAATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000506730.5
CDS TCA 90 bp GGGAGGTTTCCCTGGAGTACTTCTTACACAGACTGTCTATGCTCATaGAGAATGCCTGGATATCTGCGTCGGTCTTTGCCGAGGCAGGCG +
Preference number: 5 (lower is better)
Translates to: GRFPWSTSYTDCLCS*RMPGYLRRSLPRQA
Trigger: CGCCTGCCTCGGCAAAGACCGACGCAGATATCCAGGCATTCTTCATGAGCATAGACAGTCTGTGTAAGAAGTACTCCAGGGAAACCTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506730.5
ENST00000508428.5
CDS-3UTR CAA 90 bp GGACTAATCATGGAGATTCTCGCAGGGCCGGCTGCTATCTCAGATTTTCTAATCTACACGTGCCCGCAGTaGGTGAGGCTGAAGCACGAC +
Preference number: 5 (lower is better)
Translates to: GLIMEILAGPAAISDFLIYTCPQ*VRLKHD
Trigger: GTCGTGCTTCAGCCTCACCAACTGCGGGCACGTGTA...GATTAGAAAATCTGAGATAGCAGCCGGCCCTGCGAGAATCTCCATGATTAGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506730.5
ENST00000508428.5
CDS-3UTR CAA 90 bp TCGACTCCAGTCTGTCGGGGGCTGATGAGTGAGGTGGCAGCAGGCATCCGTGTGGGCATCCGTGTGGTTTaGTTGAAACTGAACTTTTTA +
Preference number: 5 (lower is better)
Translates to: STPVCRGLMSEVAAGIRVGIRVV*LKLNFL
Trigger: TAAAAAGTTCAGTTTCAACAAAACCACACGGATGCC...CACACGGATGCCTGCTGCCACCTCACTCATCAGCCCCCGACAGACTGGAGTCGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000506730.5
CDS-3UTR CAA 90 bp ACACACTCTCCGGGCACAGGGGGCCATTCGTCCATCTTGAGGTGGACTAATCATGGCCATTCGTCCATCTaGAGGTGGACTAATCATGGA +
Preference number: 5 (lower is better)
Translates to: THSPGTGGHSSILRWTNHGHSSI*RWTNHG
Trigger: TCCATGATTAGTCCACCTCAAGATGGACGAATGGCC...ATGATTAGTCCACCTCAAGATGGACGAATGGCCCCCTGTGCCCGGAGAGTGTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000508428.5
ENST00000510715.5
CDS-3UTR CAA 90 bp AGGGTGCCCTCAGCCTGCTGGAACGGAAACAAGACGGCCCTTTGTACCTCAGCAAAACAAGACGGCCCTTaGTACCTCAGCATATATTGG +
Preference number: 5 (lower is better)
Translates to: RVPSACWNGNKTALCTSAKQDGP*YLSIYW
Trigger: CCAATATATGCTGAGGTACAAAGGGCCGTCTTGTTT...TGCTGAGGTACAAAGGGCCGTCTTGTTTCCGTTCCAGCAGGCTGAGGGCACCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382968.9
ENST00000508428.5
ENST00000510715.5
ENST00000511620.5
CDS-3UTR CAA 90 bp CTGCTCTGGTGGAGGATGAGGATGATGGGGGAGCTGTGCGTGTGTGGAGTCATGAAACAAGACGGCCCTTaGTACCTCAGCATATATTGG +
Preference number: 5 (lower is better)
Translates to: LLWWRMRMMGELCVCGVMKQDGP*YLSIYW
Trigger: CCAATATATGCTGAGGTACAAAGGGCCGTCTTGTTT...CATGACTCCACACACGCACAGCTCCCCCATCATCCTCATCCTCCACCAGAGCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000382968.9
ENST00000433731.7
CDS GCA 90 bp TTCCCTGGAGTACTTCTTACACAGACTGTCTATGCTCATGAAGAATaGCTGGATATCTGCGTCGGTCTTTGCCGAGGCAGGCGTCGCAGT +
Preference number: 5 (lower is better)
Translates to: FPGVLLTQTVYAHEE*LDICVGLCRGRRRS
Trigger: ACTGCGACGCCTGCCTCGGCAAAGACCGACGCAGATATCCAGGCATTCTTCATGAGCATAGACAGTCTGTGTAAGAAGTACTCCAGGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506730.5
ENST00000508428.5
CDS-3UTR CAA 90 bp GATGGGGGAGCTGTGCGTGTGTGGAGTCATGGTGTATATGGGAAATCTGTACCTTCATTCTTTTTACCTTaGCCGAGGCAGGCGTCGCAG +
Preference number: 5 (lower is better)
Translates to: DGGAVRVWSHGVYGKSVPSFFLP*PRQASQ
Trigger: CTGCGACGCCTGCCTCGGCAAAGGTAAAAAGAATGA...AGGTACAGATTTCCCATATACACCATGACTCCACACACGCACAGCTCCCCCATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000382968.9
ENST00000433731.7
CDS-3UTR CAA 90 bp TGGCAAAGAGGAAACACAACAGACACAGCGGGTGTTCTGAACGTGTCCAGGGTGGGCCATTCGTCCATCTaGAGGTGGACTAATCATGGA +
Preference number: 5 (lower is better)
Translates to: WQRGNTTDTAGVLNVSRVGHSSI*RWTNHG
Trigger: TCCATGATTAGTCCACCTCAAGATGGACGAATGGCC...CACCCTGGACACGTTCAGAACACCCGCTGTGTCTGTTGTGTTTCCTCTTTGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382968.9
ENST00000508428.5
CDS-3UTR CAA 90 bp TGGCAAAGAGGAAACACAACAGACACAGCGGGTGTTCTGAACGTGTCCAGGGTGGGAAGTGTTTTAGAGTaGGTGAGTTCCCCGTGCCTT +
Preference number: 5 (lower is better)
Translates to: WQRGNTTDTAGVLNVSRVGSVLE*VSSPCL
Trigger: AAGGCACGGGGAACTCACCAACTCTAAAACACTTCC...CACCCTGGACACGTTCAGAACACCCGCTGTGTCTGTTGTGTTTCCTCTTTGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382968.9
ENST00000508428.5
ENST00000511620.5
CDS-3UTR CAA 90 bp GGAGATTCTCGCAGGGCCGGCTGCTATCTCAGACTTTGTAGTTGTTCTATCTGCTGTAAAGGCGTGCTGTaGGTGACTCGCTGTCAGACA +
Preference number: 5 (lower is better)
Translates to: GDSRRAGCYLRLCSCSICCKGVL*VTRCQT
Trigger: TGTCTGACAGCGAGTCACCAACAGCACGCCTTTACA...GCAGATAGAACAACTACAAAGTCTGAGATAGCAGCCGGCCCTGCGAGAATCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510715.5
CDS TCA 90 bp AATGAACGAGCTCTTCCCTCTGCATCTGCAGTCATCTTTCATTCTTaGTCTTGGAGAGCCAGACGACCAATGCACATGGCAGTGGGTGCC +
Preference number: 5 (lower is better)
Translates to: NERALPSASAVIFHS*SWRARRPMHMAVGA
Trigger: GGCACCCACTGCCATGTGCATTGGTCGTCTGGCTCTCCAAGATCAAGAATGAAAGATGACTGCAGATGCAGAGGGAAGAGCTCGTTCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512552.1
CDS GCA 90 bp TTACAATACCACCTCACGTCACACAGCTGCGGGAAAACTCCACCCTaGGTTTGTGATGCTCACCTCCACAGTGTAACTGACAAACAGTGG +
Preference number: 5 (lower is better)
Translates to: LQYHLTSHSCGKTPP*VCDAHLHSVTDKQW
Trigger: CCACTGTTTGTCAGTTACACTGTGGAGGTGAGCATCACAAACGCAGGGTGGAGTTTTCCCGCAGCTGTGTGACGTGAGGTGGTATTGTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333673.5
CDS-3UTR CAA 90 bp TGGAAGCAACCAAGATGCCCTTCAGTAGGTGAATGGATGAACTATGATACATCCTACACGTGCCCGCAGTaGGTGAGGCTGAAGCACGAC +
Preference number: 5 (lower is better)
Translates to: WKQPRCPSVGEWMNYDTSYTCPQ*VRLKHD
Trigger: GTCGTGCTTCAGCCTCACCAACTGCGGGCACGTGTA...GGATGTATCATAGTTCATCCATTCACCTACTGAAGGGCATCTTGGTTGCTTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382968.9
ENST00000433731.7
CDS-3UTR CAA 90 bp TGGCAAAGAGGAAACACAACAGACACAGCGGGTGTTCTGAACGTGTCCAGGGTGCTGCGTCGGTATGCTTaGAAAGCAAAACTGTACGAC +
Preference number: 5 (lower is better)
Translates to: WQRGNTTDTAGVLNVSRVLRRYA*KAKLYD
Trigger: GTCGTACAGTTTTGCTTTCAAAGCATACCGACGCAG...CACCCTGGACACGTTCAGAACACCCGCTGTGTCTGTTGTGTTTCCTCTTTGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382968.9
ENST00000511620.5
CDS-3UTR CAA 90 bp ATGAAATGCAAAATAAAACAGCAAGATACCACTACATACCTATCAGCTGGCCAAGAAGCCCACGCAAGGTaGGGACCAGCCTCCCCGCGC +
Preference number: 5 (lower is better)
Translates to: MKCKIKQQDTTTYLSAGQEAHAR*GPASPR
Trigger: GCGCGGGGAGGCTGGTCCCAACCTTGCGTGGGCTTC...TTGGCCAGCTGATAGGTATGTAGTGGTATCTTGCTGTTTTATTTTGCATTTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000382968.9
ENST00000433731.7
CDS-3UTR CAA 90 bp TGTAGTTGTTCTATCTGCAGCACTGACTTCCTAAGGGATTCTTCCAACCTAGAATATCTGCGTCGGTCTTaGCCGAGGCAGGCGTCGCAG +
Preference number: 5 (lower is better)
Translates to: CSCSICSTDFLRDSSNLEYLRRS*PRQASQ
Trigger: CTGCGACGCCTGCCTCGGCAAAGACCGACGCAGATA...TTCTAGGTTGGAAGAATCCCTTAGGAAGTCAGTGCTGCAGATAGAACAACTACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506730.5
ENST00000508428.5
CDS-3UTR CAA 90 bp TGTAGTTGTTCTATCTGCAGCACTGACTTCCTAAGGGATTCTTCCAACCTAGAATTACAGAACACCCAGTaGGCCATGCCAGGCGGGCGA +
Preference number: 5 (lower is better)
Translates to: CSCSICSTDFLRDSSNLELQNTQ*AMPGGR
Trigger: TCGCCCGCCTGGCATGGCCAACTGGGTGTTCTGTAA...TTCTAGGTTGGAAGAATCCCTTAGGAAGTCAGTGCTGCAGATAGAACAACTACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506730.5
ENST00000508428.5
ENST00000510715.5
CDS-3UTR CAA 90 bp CCACTACATACCTATCAGCTGGCCAAAATCCAGAACACTGACATCATCAAATGTTACACGTGCCCGCAGTaGGTGAGGCTGAAGCACGAC +
Preference number: 5 (lower is better)
Translates to: PLHTYQLAKIQNTDIIKCYTCPQ*VRLKHD
Trigger: GTCGTGCTTCAGCCTCACCAACTGCGGGCACGTGTA...ACATTTGATGATGTCAGTGTTCTGGATTTTGGCCAGCTGATAGGTATGTAGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382968.9
ENST00000433731.7
CDS-3UTR CAA 90 bp GGAAGTGTTTTAGAGTTGGTGAGTTCCCCGTGCCTTCCAGAACTGAACGCTAGGCTGCGTCGGTATGCTTaGAAAGCAAAACTGTACGAC +
Preference number: 5 (lower is better)
Translates to: GSVLELVSSPCLPELNARLRRYA*KAKLYD
Trigger: GTCGTACAGTTTTGCTTTCAAAGCATACCGACGCAG...CCTAGCGTTCAGTTCTGGAAGGCACGGGGAACTCACCAACTCTAAAACACTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000511620.5
CDS-3UTR CAA 90 bp ATTGGAAGTGTTTTAGAGTTGGTGAGTTCCCCGTGCCTTCCAGAACTGAACGCTGGAAGTGTTTTAGAGTaGGTGAGTTCCCCGTGCCTT +
Preference number: 5 (lower is better)
Translates to: IGSVLELVSSPCLPELNAGSVLE*VSSPCL
Trigger: AAGGCACGGGGAACTCACCAACTCTAAAACACTTCC...AGCGTTCAGTTCTGGAAGGCACGGGGAACTCACCAACTCTAAAACACTTCCAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000508428.5
ENST00000510715.5
ENST00000511620.5
CDS-3UTR CAA 90 bp TATTGGAAGTGTTTTAGAGTTGGTGAGTTCCCCGTGCCTTCCAGAACTGAACGCGGAAGTGTTTTAGAGTaGGTGAGTTCCCCGTGCCTT +
Preference number: 5 (lower is better)
Translates to: YWKCFRVGEFPVPSRTERGSVLE*VSSPCL
Trigger: AAGGCACGGGGAACTCACCAACTCTAAAACACTTCC...GCGTTCAGTTCTGGAAGGCACGGGGAACTCACCAACTCTAAAACACTTCCAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000508428.5
ENST00000510715.5
ENST00000511620.5
CDS-3UTR CAA 90 bp GGAGATTCTCGCAGGGCCGGCTGCTATCTCAGACTTTGTAGTTGTTCTATCTGCAAACAAGACGGCCCTTaGTACCTCAGCATATATTGG +
Preference number: 5 (lower is better)
Translates to: GDSRRAGCYLRLCSCSICKQDGP*YLSIYW
Trigger: CCAATATATGCTGAGGTACAAAGGGCCGTCTTGTTT...GCAGATAGAACAACTACAAAGTCTGAGATAGCAGCCGGCCCTGCGAGAATCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510715.5
CDS-3UTR CAA 90 bp CCCTCAGCCTGCTGGAACGGAAACAAGACGGCCCTTTGTACCTCAGCATATATTAAACAAGACGGCCCTTaGTACCTCAGCATATATTGG +
Preference number: 5 (lower is better)
Translates to: PSACWNGNKTALCTSAYIKQDGP*YLSIYW
Trigger: CCAATATATGCTGAGGTACAAAGGGCCGTCTTGTTT...AATATATGCTGAGGTACAAAGGGCCGTCTTGTTTCCGTTCCAGCAGGCTGAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382968.9
ENST00000508428.5
ENST00000510715.5
ENST00000511620.5
CDS-3UTR CAA 90 bp ATCAGCTGGCCAAAATCCAGAACACTGACATCATCAAATGTGAGGACGTGGAGCCCCCATTCGTCCATCTaGAGGTGGACTAATCATGGA +
Preference number: 5 (lower is better)
Translates to: ISWPKSRTLTSSNVRTWSPHSSI*RWTNHG
Trigger: TCCATGATTAGTCCACCTCAAGATGGACGAATGGGG...GCTCCACGTCCTCACATTTGATGATGTCAGTGTTCTGGATTTTGGCCAGCTGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000433731.7
CDS-3UTR CAA 90 bp TATTGGAAGTGTTTTAGAGTTGGTGAGTTCCCCGTGCCTTCCAGAACTGAACGCCCCCATTCGTCCATCTaGAGGTGGACTAATCATGGA +
Preference number: 5 (lower is better)
Translates to: YWKCFRVGEFPVPSRTERPHSSI*RWTNHG
Trigger: TCCATGATTAGTCCACCTCAAGATGGACGAATGGGG...GCGTTCAGTTCTGGAAGGCACGGGGAACTCACCAACTCTAAAACACTTCCAATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000511620.5
CDS-3UTR CAA 90 bp TGTGGAGTCATGGTGTATATGGGAAATCTGTACCTTCCTTTCAATTTTTCTGTGTTACAGAACACCCAGTaGGCCATGCCAGGCGGGCGA +
Preference number: 5 (lower is better)
Translates to: CGVMVYMGNLYLPFNFSVLQNTQ*AMPGGR
Trigger: TCGCCCGCCTGGCATGGCCAACTGGGTGTTCTGTAA...CACAGAAAAATTGAAAGGAAGGTACAGATTTCCCATATACACCATGACTCCACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000382968.9
ENST00000433731.7
CDS CCA 90 bp CTACATTACTTAATTATTTCAACAAGAGGGAAAGTACAGTCGCACTaGCTGTCTAACGTACACATGCTGGTGGGCACGAAGGCTGGAGGA +
Preference number: 5 (lower is better)
Translates to: LHYLIISTRGKVQSH*LSNVHMLVGTKAGG
Trigger: TCCTCCAGCCTTCGTGCCCACCAGCATGTGTACGTTAGACAGCCAGTGCGACTGTACTTTCCCTCTTGTTGAAATAATTAAGTAATGTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000503206.5
ENST00000505693.5
ENST00000514024.5
ENST00000514757.5
CDS CCA 90 bp CAGGGCCGGCTGCTATCTCAGACTAAGAATGCAACAAGAAAACAATaGGTAAAATTCCAATATTGCGGCTTACGAGATTCGGACTCCCAC +
Preference number: 5 (lower is better)
Translates to: QGRLLSQTKNATRKQ*VKFQYCGLRDSDSH
Trigger: GTGGGAGTCCGAATCTCGTAAGCCGCAATATTGGAATTTTACCCATTGTTTTCTTGTTGCATTCTTAGTCTGAGATAGCAGCCGGCCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508633.5
CDS-3UTR CAA 90 bp ATATATTGGAAGTGTTTTAGAGTTGGTGAGTTCCCCGTGCCTTCCAGAACTGAATCATTCTTTTTACCTTaGCCGAGGCAGGCGTCGCAG +
Preference number: 5 (lower is better)
Translates to: IYWKCFRVGEFPVPSRTESFFLP*PRQASQ
Trigger: CTGCGACGCCTGCCTCGGCAAAGGTAAAAAGAATGA...TTCAGTTCTGGAAGGCACGGGGAACTCACCAACTCTAAAACACTTCCAATATAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000510715.5
ENST00000511620.5
CDS-3UTR CAA 90 bp GTTTTAGAGTTGGTGAGTTCCCCGTGCCTTCCAGAACTGAACGCTAGGAGGAGCTCCATCGACTCCAGTTaGAAACTGAACTTTTTATTG +
Preference number: 5 (lower is better)
Translates to: VLELVSSPCLPELNARRSSIDSS*KLNFLL
Trigger: CAATAAAAAGTTCAGTTTCAAACTGGAGTCGATGGA...GCTCCTCCTAGCGTTCAGTTCTGGAAGGCACGGGGAACTCACCAACTCTAAAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000508428.5
CDS TCA 90 bp GGGAGGTTTCCCTGGAGTACTTCTTACACAGACTGTCTATGCTCATaGAGAATGCCTGGATATCTGCGTCGGTATGCTTTGAAAGCAAAA +
Preference number: 5 (lower is better)
Translates to: GRFPWSTSYTDCLCS*RMPGYLRRYALKAK
Trigger: TTTTGCTTTCAAAGCATACCGACGCAGATATCCAGGCATTCTTCATGAGCATAGACAGTCTGTGTAAGAAGTACTCCAGGGAAACCTCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333673.5
ENST00000382968.9
ENST00000433731.7
ENST00000454487.6
ENST00000511620.5
CDS-3UTR CAA 90 bp TCACCATCTGATCCAGCATTCACACTCCTTAGTATTTACCCAAAGGAGCTGAAAGGCCATTCGTCCATCTaGAGGTGGACTAATCATGGA +
Preference number: 5 (lower is better)
Translates to: SPSDPAFTLLSIYPKELKGHSSI*RWTNHG
Trigger: TCCATGATTAGTCCACCTCAAGATGGACGAATGGCC...TTTCAGCTCCTTTGGGTAAATACTAAGGAGTGTGAATGCTGGATCAGATGGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382968.9
CDS-3UTR CAA 90 bp TCACCATCTGATCCAGCATTCACACTCCTTAGTATTTACCCAAAGGAGCTGAAAGGAAGTGTTTTAGAGTaGGTGAGTTCCCCGTGCCTT +
Preference number: 5 (lower is better)
Translates to: SPSDPAFTLLSIYPKELKGSVLE*VSSPCL
Trigger: AAGGCACGGGGAACTCACCAACTCTAAAACACTTCC...TTTCAGCTCCTTTGGGTAAATACTAAGGAGTGTGAATGCTGGATCAGATGGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382968.9
ENST00000433731.7
CDS-3UTR CAA 90 bp CTTTGTAGTTGTTCTATCTGCAGCACTGACTTCCTAAGGGATTCTTCCAACCTATCCCTTGTAGGGAATTaGCAGAGGTGGAATCCTGAG +
Preference number: 5 (lower is better)
Translates to: LCSCSICSTDFLRDSSNLSLVGN*QRWNPE
Trigger: CTCAGGATTCCACCTCTGCAAATTCCCTACAAGGGA...TAGGTTGGAAGAATCCCTTAGGAAGTCAGTGCTGCAGATAGAACAACTACAAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506730.5
CDS-3UTR CAA 90 bp GATGATCTCATACTTTGTAGTTGTTCTATCTGCAGCACTGACTTCCTAAGGGATGCCCATTCGTCCATCTaGAGGTGGACTAATCATGGA +
Preference number: 5 (lower is better)
Translates to: DDLILCSCSICSTDFLRDAHSSI*RWTNHG
Trigger: TCCATGATTAGTCCACCTCAAGATGGACGAATGGGC...ATCCCTTAGGAAGTCAGTGCTGCAGATAGAACAACTACAAAGTATGAGATCATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506730.5
CDS TCA 90 bp CGGTTTTCCCACAGCATTTTTGCTCTGATGAAAGTTTCTGGTAAATaGACGAGCTCTTCCCTCTGCATCTGCAGTCATCTTTCATTCTTG +
Preference number: 5 (lower is better)
Translates to: RFSHSIFALMKVSGK*TSSSLCICSHLSFL
Trigger: CAAGAATGAAAGATGACTGCAGATGCAGAGGGAAGAGCTCGTTCATTTACCAGAAACTTTCATCAGAGCAAAAATGCTGTGGGAAAACCG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000512552.1
CDS-3UTR CAA 90 bp TACTGTACAATTCCAACTCCAGGAGAGTCTGAAAAAGGGACCGTAAAAAGATCACTGCGTCGGTATGCTTaGAAAGCAAAACTGTACGAC +
Preference number: 5 (lower is better)
Translates to: YCTIPTPGESEKGTVKRSLRRYA*KAKLYD
Trigger: GTCGTACAGTTTTGCTTTCAAAGCATACCGACGCAG...TGATCTTTTTACGGTCCCTTTTTCAGACTCTCCTGGAGTTGGAATTGTACAGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000382968.9
ENST00000433731.7
CDS-3UTR CAA 90 bp TGTAGTTGTTCTATCTGCAGCACTGACTTCCTAAGGGATTCTTCCAACCTAGAAAAACAAGACGGCCCTTaGTACCTCAGCATATATTGG +
Preference number: 5 (lower is better)
Translates to: CSCSICSTDFLRDSSNLEKQDGP*YLSIYW
Trigger: CCAATATATGCTGAGGTACAAAGGGCCGTCTTGTTT...TTCTAGGTTGGAAGAATCCCTTAGGAAGTCAGTGCTGCAGATAGAACAACTACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000508428.5
ENST00000510715.5
CDS-3UTR CAA 90 bp TCACCATCTGATCCAGCATTCACACTCCTTAGTATTTACCCAAAGGAGCTGAAAAAAGCTGCTGCCACTTaGGAAGGTAGTTTGGCAATT +
Preference number: 5 (lower is better)
Translates to: SPSDPAFTLLSIYPKELKKAAAT*EGSLAI
Trigger: AATTGCCAAACTACCTTCCAAAGTGGCAGCAGCTTT...TTTCAGCTCCTTTGGGTAAATACTAAGGAGTGTGAATGCTGGATCAGATGGTGA
43% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000382968.9
ENST00000433731.7
CDS-3UTR CAA 90 bp TACTGTACAATTCCAACTCCAGGAGAGTCTGAAAAAGGGACCGTAAAAAGATCAAAAGCTGCTGCCACTTaGGAAGGTAGTTTGGCAATT +
Preference number: 5 (lower is better)
Translates to: YCTIPTPGESEKGTVKRSKAAAT*EGSLAI
Trigger: AATTGCCAAACTACCTTCCAAAGTGGCAGCAGCTTT...TGATCTTTTTACGGTCCCTTTTTCAGACTCTCCTGGAGTTGGAATTGTACAGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000382968.9
ENST00000433731.7
CDS GCA 90 bp CAGACTAAGAATGCAACAAGAAAACAATGGGTAAAATTCCAATATTaGGGCTTACGAGATTCGGACTCCCACTGTCTGTTAGGAACACAT +
Preference number: 5 (lower is better)
Translates to: QTKNATRKQWVKFQY*GLRDSDSHCLLGTH
Trigger: ATGTGTTCCTAACAGACAGTGGGAGTCCGAATCTCGTAAGCCGCAATATTGGAATTTTACCCATTGTTTTCTTGTTGCATTCTTAGTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508633.5
CDS-3UTR CAA 90 bp CCACTACATACCTATCAGCTGGCCAAAATCCAGAACACTGACATCATCAAATGTGGCATCCGTGTGGTTTaGTTGAAACTGAACTTTTTA +
Preference number: 5 (lower is better)
Translates to: PLHTYQLAKIQNTDIIKCGIRVV*LKLNFL
Trigger: TAAAAAGTTCAGTTTCAACAAAACCACACGGATGCC...ACATTTGATGATGTCAGTGTTCTGGATTTTGGCCAGCTGATAGGTATGTAGTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000382968.9
ENST00000433731.7
CDS-3UTR CAA 90 bp TCACCATCTGATCCAGCATTCACACTCCTTAGTATTTACCCAAAGGAGCTGAAAGGCATCCGTGTGGTTTaGTTGAAACTGAACTTTTTA +
Preference number: 5 (lower is better)
Translates to: SPSDPAFTLLSIYPKELKGIRVV*LKLNFL
Trigger: TAAAAAGTTCAGTTTCAACAAAACCACACGGATGCC...TTTCAGCTCCTTTGGGTAAATACTAAGGAGTGTGAATGCTGGATCAGATGGTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000382968.9
ENST00000433731.7
CDS CAA 72 bp GCGGCGAGGCCGGGCCCACGCGAAGCCCACGCAAGGTaGGGACCAGCCTCCCCGCGCAGGGCCCGAAGGCGG +
Preference number: 6 (lower is better)
Translates to: AARPGPREAHAR*GPASPRRARRR
Trigger: CCGCCTTCGGGCCCTGCGCGGGGAGGCTGGTCCCAACCTTGCGTGGGCTTCGCGTGGGCCCGGCCTCGCCGC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382968.9
ENST00000433731.7
CDS CAA 90 bp GCGACCGCAGCGGCGAGGCCGGGCCCACGCGAAGCCCACGCAAGGTaGGGACCAGCCTCCCCGCGCAGGGCCCGAAGGCGGGCAGCTCTG +
Preference number: 6 (lower is better)
Translates to: ATAAARPGPREAHAR*GPASPRRARRRAAL
Trigger: CAGAGCTGCCCGCCTTCGGGCCCTGCGCGGGGAGGCTGGTCCCAACCTTGCGTGGGCTTCGCGTGGGCCCGGCCTCGCCGCTGCGGTCGC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433731.7
CDS CAA 90 bp GACGTCCTGTGGGGCGGCTGGAAGCAGCGATTACAGAACACCCAGTaGGCCATGCCAGGCGGGCGACCGCAGCGGCGAGGCCGGGCCCAC +
Preference number: 6 (lower is better)
Translates to: DVLWGGWKQRLQNTQ*AMPGGRPQRRGRAH
Trigger: GTGGGCCCGGCCTCGCCGCTGCGGTCGCCCGCCTGGCATGGCCAACTGGGTGTTCTGTAATCGCTGCTTCCAGCCGCCCCACAGGACGTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000333673.5
ENST00000382968.9
ENST00000433731.7
ENST00000454487.6
ENST00000505730.1
ENST00000506730.5
ENST00000508428.5
ENST00000510715.5
ENST00000511620.5
CDS GCA 72 bp GCTGGAAGCAGCGATTACAGAACACCCAGTTGGCCATaGCAGGCGGGCGACCGCAGCGGCGAGGCCGGGCCC +
Preference number: 6 (lower is better)
Translates to: AGSSDYRTPSWP*QAGDRSGEAGP
Trigger: GGGCCCGGCCTCGCCGCTGCGGTCGCCCGCCTGGCATGGCCAACTGGGTGTTCTGTAATCGCTGCTTCCAGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000333673.5
ENST00000382968.9
ENST00000433731.7
ENST00000454487.6
ENST00000505730.1
ENST00000506730.5
ENST00000508428.5
ENST00000510715.5
ENST00000511620.5
CDS CCA 72 bp GGGGCGGCTGGAAGCAGCGATTACAGAACACCCAGTTaGCCATGCCAGGCGGGCGACCGCAGCGGCGAGGCC +
Preference number: 6 (lower is better)
Translates to: GAAGSSDYRTPS*PCQAGDRSGEA
Trigger: GGCCTCGCCGCTGCGGTCGCCCGCCTGGCATGGCCAACTGGGTGTTCTGTAATCGCTGCTTCCAGCCGCCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000333673.5
ENST00000382968.9
ENST00000433731.7
ENST00000454487.6
ENST00000505730.1
ENST00000506730.5
ENST00000508428.5
ENST00000510715.5
ENST00000511620.5
CDS CAA 72 bp TGGGGCGGCTGGAAGCAGCGATTACAGAACACCCAGTaGGCCATGCCAGGCGGGCGACCGCAGCGGCGAGGC +
Preference number: 6 (lower is better)
Translates to: WGGWKQRLQNTQ*AMPGGRPQRRG
Trigger: GCCTCGCCGCTGCGGTCGCCCGCCTGGCATGGCCAACTGGGTGTTCTGTAATCGCTGCTTCCAGCCGCCCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000333673.5
ENST00000382968.9
ENST00000433731.7
ENST00000454487.6
ENST00000505730.1
ENST00000506730.5
ENST00000508428.5
ENST00000510715.5
ENST00000511620.5
CDS CAA 72 bp TTGCCGAGGCAGGCGTCGCAGTACACGTGCCCGCAGTaGGTGAGGCTGAAGCACGACGTCCTGTGGGGCGGC +
Preference number: 6 (lower is better)
Translates to: LPRQASQYTCPQ*VRLKHDVLWGG
Trigger: GCCGCCCCACAGGACGTCGTGCTTCAGCCTCACCAACTGCGGGCACGTGTACTGCGACGCCTGCCTCGGCAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000333673.5
ENST00000382968.9
ENST00000433731.7
ENST00000454487.6
ENST00000505730.1
ENST00000506730.5
ENST00000508428.5
ENST00000510715.5
ENST00000511620.5
CDS CAA 90 bp CGTCGGTCTTTGCCGAGGCAGGCGTCGCAGTACACGTGCCCGCAGTaGGTGAGGCTGAAGCACGACGTCCTGTGGGGCGGCTGGAAGCAG +
Preference number: 6 (lower is better)
Translates to: RRSLPRQASQYTCPQ*VRLKHDVLWGGWKQ
Trigger: CTGCTTCCAGCCGCCCCACAGGACGTCGTGCTTCAGCCTCACCAACTGCGGGCACGTGTACTGCGACGCCTGCCTCGGCAAAGACCGACG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506730.5
ENST00000508428.5
CDS GCA 72 bp CGTCGGTCTTTGCCGAGGCAGGCGTCGCAGTACACGTaGCCGCAGTTGGTGAGGCTGAAGCACGACGTCCTG +
Preference number: 6 (lower is better)
Translates to: RRSLPRQASQYT*PQLVRLKHDVL
Trigger: CAGGACGTCGTGCTTCAGCCTCACCAACTGCGGGCACGTGTACTGCGACGCCTGCCTCGGCAAAGACCGACG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506730.5
ENST00000508428.5
CDS GCA 72 bp GAGCGGGTGGCTGGGTGCTCATCTTTCAGGTGTCACTaGCCCAAGGTGAGCAGGTCCCGCAGGAGGCATGGA +
Preference number: 6 (lower is better)
Translates to: ERVAGCSSFRCH*PKVSRSRRRHG
Trigger: TCCATGCCTCCTGCGGGACCTGCTCACCTTGGGGCAGTGACACCTGAAAGATGAGCACCCAGCCACCCGCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000503206.5
ENST00000505693.5
ENST00000514024.5
ENST00000514757.5
CDS GCA 72 bp CTGGAGGACTGGAAGGGGGCAGAGCGGGTGGCTGGGTaGTCATCTTTCAGGTGTCACTGCCCCAAGGTGAGC +
Preference number: 6 (lower is better)
Translates to: LEDWKGAERVAG*SSFRCHCPKVS
Trigger: GCTCACCTTGGGGCAGTGACACCTGAAAGATGAGCACCCAGCCACCCGCTCTGCCCCCTTCCAGTCCTCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000503206.5
ENST00000505693.5
ENST00000514024.5
ENST00000514757.5
CDS CAA 90 bp TTTTTACCTTTGCCGAGGCAGGCGTCGCAGTACACGTGCCCGCAGTaGGTGAGGCTGAAGCACGACGTCCTGTGGGGCGGCTGGAAGCAG +
Preference number: 6 (lower is better)
Translates to: FLPLPRQASQYTCPQ*VRLKHDVLWGGWKQ
Trigger: CTGCTTCCAGCCGCCCCACAGGACGTCGTGCTTCAGCCTCACCAACTGCGGGCACGTGTACTGCGACGCCTGCCTCGGCAAAGGTAAAAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000333673.5
ENST00000382968.9
ENST00000433731.7
ENST00000454487.6
ENST00000505730.1
ENST00000510715.5
ENST00000511620.5
CDS CAA 90 bp CTGGCTGCTGCTTGGCTTCCATGGGTCGAGCCTCTGGGCACCTCCTaGGAGGATGTGGCTGGGCATAACTTGAGACGGCAACAGCCTCGG +
Preference number: 6 (lower is better)
Translates to: LAAAWLPWVEPLGTS*EDVAGHNLRRQQPR
Trigger: CCGAGGCTGTTGCCGTCTCAAGTTATGCCCAGCCACATCCTCCAAGGAGGTGCCCAGAGGCTCGACCCATGGAAGCCAAGCAGCAGCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333673.5
CDS TCA 72 bp ACCGCCGGCATCCTGGTCTGGGTGCCCGTGTTGTGCTaGCCCAGTGTTCTTGGGGATCTCTGGCTGCTGCTT +
Preference number: 6 (lower is better)
Translates to: TAGILVWVPVLC*PSVLGDLWLLL
Trigger: AAGCAGCAGCCAGAGATCCCCAAGAACACTGGGTCAGCACAACACGGGCACCCAGACCAGGATGCCGGCGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333673.5
CDS CCA 72 bp TTCTCTCCTGAGACAGCACCTGGCCTCTGCAGCACTTaGCAAAACCACCCTGGAGCGCACGGCCTGTGGCTC +
Preference number: 6 (lower is better)
Translates to: FSPETAPGLCST*QNHPGAHGLWL
Trigger: GAGCCACAGGCCGTGCGCTCCAGGGTGGTTTTGCCAAGTGCTGCAGAGGCCAGGTGCTGTCTCAGGAGAGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333673.5
CDS CCA 72 bp AAGGCTGGAGGACTGGAAGGGGGCAGAGCGGGTGGCTaGGTGCTCATCTTTCAGGTGTCACTGCCCCAAGGT +
Preference number: 6 (lower is better)
Translates to: KAGGLEGGRAGG*VLIFQVSLPQG
Trigger: ACCTTGGGGCAGTGACACCTGAAAGATGAGCACCCAGCCACCCGCTCTGCCCCCTTCCAGTCCTCCAGCCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000503206.5
ENST00000505693.5
ENST00000514024.5
ENST00000514757.5
CDS TCA 72 bp CTGGGTGCTCATCTTTCAGGTGTCACTGCCCCAAGGTaGGCAGGTCCCGCAGGAGGCATGGAAGTCGCGGTA +
Preference number: 6 (lower is better)
Translates to: LGAHLSGVTAPR*AGPAGGMEVAV
Trigger: TACCGCGACTTCCATGCCTCCTGCGGGACCTGCTCACCTTGGGGCAGTGACACCTGAAAGATGAGCACCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000503206.5
ENST00000505693.5
ENST00000514024.5
ENST00000514757.5
CDS GCA 72 bp TGTGCTGACCCAGTGTTCTTGGGGATCTCTGGCTGCTaGTTGGCTTCCATGGGTCGAGCCTCTGGGCACCTC +
Preference number: 6 (lower is better)
Translates to: CADPVFLGISGC*LASMGRASGHL
Trigger: GAGGTGCCCAGAGGCTCGACCCATGGAAGCCAAGCAGCAGCCAGAGATCCCCAAGAACACTGGGTCAGCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333673.5
CDS CCA 72 bp CTCTGGCTGCTGCTTGGCTTCCATGGGTCGAGCCTCTaGGCACCTCCTTGGAGGATGTGGCTGGGCATAACT +
Preference number: 6 (lower is better)
Translates to: LWLLLGFHGSSL*APPWRMWLGIT
Trigger: AGTTATGCCCAGCCACATCCTCCAAGGAGGTGCCCAGAGGCTCGACCCATGGAAGCCAAGCAGCAGCCAGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333673.5
CDS TCA 72 bp CGCACGGCCCTGCTCCTCCCTAGCGCTGAAGCCAAGTaGACTCAACACCCCACTGCCATTTACATCACTGGC +
Preference number: 6 (lower is better)
Translates to: RTALLLPSAEAK*TQHPTAIYITG
Trigger: GCCAGTGATGTAAATGGCAGTGGGGTGTTGAGTTCACTTGGCTTCAGCGCTAGGGAGGAGCAGGGCCGTGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505693.5
ENST00000514757.5
CDS GCA 72 bp TTTTTACCTTTGCCGAGGCAGGCGTCGCAGTACACGTaGCCGCAGTTGGTGAGGCTGAAGCACGACGTCCTG +
Preference number: 6 (lower is better)
Translates to: FLPLPRQASQYT*PQLVRLKHDVL
Trigger: CAGGACGTCGTGCTTCAGCCTCACCAACTGCGGGCACGTGTACTGCGACGCCTGCCTCGGCAAAGGTAAAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000333673.5
ENST00000382968.9
ENST00000433731.7
ENST00000454487.6
ENST00000505730.1
ENST00000510715.5
ENST00000511620.5
CDS GCA 72 bp TGTTGTGCTGACCCAGTGTTCTTGGGGATCTCTGGCTaGTGCTTGGCTTCCATGGGTCGAGCCTCTGGGCAC +
Preference number: 6 (lower is better)
Translates to: CCADPVFLGISG*CLASMGRASGH
Trigger: GTGCCCAGAGGCTCGACCCATGGAAGCCAAGCAGCAGCCAGAGATCCCCAAGAACACTGGGTCAGCACAACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333673.5
CDS CCA 72 bp TTGGTGAGGCTGAAGCACGACGTCCTGTGGGGCGGCTaGAAGCAGCGATTACAGAACACCCAGTTGGCCATG +
Preference number: 6 (lower is better)
Translates to: LVRLKHDVLWGG*KQRLQNTQLAM
Trigger: CATGGCCAACTGGGTGTTCTGTAATCGCTGCTTCCAGCCGCCCCACAGGACGTCGTGCTTCAGCCTCACCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000333673.5
ENST00000382968.9
ENST00000433731.7
ENST00000454487.6
ENST00000505730.1
ENST00000506730.5
ENST00000508428.5
ENST00000510715.5
ENST00000511620.5
CDS CCA 72 bp TACAGTCGCACTGGCTGTCTAACGTACACATGCTGGTaGGCACGAAGGCTGGAGGACTGGAAGGGGGCAGAG +
Preference number: 6 (lower is better)
Translates to: YSRTGCLTYTCW*ARRLEDWKGAE
Trigger: CTCTGCCCCCTTCCAGTCCTCCAGCCTTCGTGCCCACCAGCATGTGTACGTTAGACAGCCAGTGCGACTGTA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000503206.5
ENST00000505693.5
ENST00000514024.5
ENST00000514757.5
CDS CAA 72 bp ACGGGGCTCTCCTCACGCAGCTGTAAAGGCGTGCTGTaGGTGACTCGCTGTCAGACACAGGAAAGGGGCGAT +
Preference number: 6 (lower is better)
Translates to: TGLSSRSCKGVL*VTRCQTQERGD
Trigger: ATCGCCCCTTTCCTGTGTCTGACAGCGAGTCACCAACAGCACGCCTTTACAGCTGCGTGAGGAGAGCCCCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510715.5
CDS CAA 90 bp GTCGAGCCTCTGGGCACCTCCTTGGAGGATGTGGCTGGGCATAACTaGAGACGGCAACAGCCTCGGGAAAGCCTGAGATACTGGGAGGTT +
Preference number: 6 (lower is better)
Translates to: VEPLGTSLEDVAGHN*RRQQPRESLRYWEV
Trigger: AACCTCCCAGTATCTCAGGCTTTCCCGAGGCTGTTGCCGTCTCAAGTTATGCCCAGCCACATCCTCCAAGGAGGTGCCCAGAGGCTCGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333673.5
CDS CAA 90 bp GCGGGATCCACGGGGCTCTCCTCACGCAGCTGTAAAGGCGTGCTGTaGGTGACTCGCTGTCAGACACAGGAAAGGGGCGATGCTTTGAAA +
Preference number: 6 (lower is better)
Translates to: AGSTGLSSRSCKGVL*VTRCQTQERGDALK
Trigger: TTTCAAAGCATCGCCCCTTTCCTGTGTCTGACAGCGAGTCACCAACAGCACGCCTTTACAGCTGCGTGAGGAGAGCCCCGTGGATCCCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510715.5
CDS TCA 72 bp AACTCAAGCAACTTCTGGCCCCAAGGGGACTTGGTGTaGATGAGGGTCCTGCTGGGATGGAGCAGGGTGAGG +
Preference number: 6 (lower is better)
Translates to: NSSNFWPQGDLV*MRVLLGWSRVR
Trigger: CCTCACCCTGCTCCATCCCAGCAGGACCCTCATTCACACCAAGTCCCCTTGGGGCCAGAAGTTGCTTGAGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333673.5
CDS TCA 72 bp GGCTCTCCTCACGCAGCTGTAAAGGCGTGCTGTTGGTaGCTCGCTGTCAGACACAGGAAAGGGGCGATGCTT +
Preference number: 6 (lower is better)
Translates to: GSPHAAVKACCW*LAVRHRKGAML
Trigger: AAGCATCGCCCCTTTCCTGTGTCTGACAGCGAGTCACCAACAGCACGCCTTTACAGCTGCGTGAGGAGAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510715.5
CDS TCA 72 bp TGCGTCGGTAGCGTGACTGAAGGCCTTTGCTGCGTCTaGCGTCATCATGGCAGAGGGCGTAAGGAATGGAGG +
Preference number: 6 (lower is better)
Translates to: CVGSVTEGLCCV*RHHGRGRKEWR
Trigger: CCTCCATTCCTTACGCCCTCTGCCATGATGACGTCAGACGCAGCAAAGGCCTTCAGTCACGCTACCGACGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510715.5
ENST00000512552.1
CDS GCA 72 bp GGAAAGTACAGTCGCACTGGCTGTCTAACGTACACATaGTGGTGGGCACGAAGGCTGGAGGACTGGAAGGGG +
Preference number: 6 (lower is better)
Translates to: GKYSRTGCLTYT*WWARRLEDWKG
Trigger: CCCCTTCCAGTCCTCCAGCCTTCGTGCCCACCAGCATGTGTACGTTAGACAGCCAGTGCGACTGTACTTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000503206.5
ENST00000505693.5
ENST00000514024.5
ENST00000514757.5
CDS GCA 72 bp GCAGAGGGCGTAAGGAATGGAGGAAATCAACCCTGGTaGAGAGCAATCGAGTCCACAAGGTCCGACGGCGCA +
Preference number: 6 (lower is better)
Translates to: AEGVRNGGNQPW*RAIESTRSDGA
Trigger: TGCGCCGTCGGACCTTGTGGACTCGATTGCTCTGCACCAGGGTTGATTTCCTCCATTCCTTACGCCCTCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510715.5
ENST00000512552.1
CDS CCA 72 bp AAGTACAGTCGCACTGGCTGTCTAACGTACACATGCTaGTGGGCACGAAGGCTGGAGGACTGGAAGGGGGCA +
Preference number: 6 (lower is better)
Translates to: KYSRTGCLTYTC*WARRLEDWKGA
Trigger: TGCCCCCTTCCAGTCCTCCAGCCTTCGTGCCCACCAGCATGTGTACGTTAGACAGCCAGTGCGACTGTACTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000503206.5
ENST00000505693.5
ENST00000514024.5
ENST00000514757.5
CDS CAA 72 bp CTGGGCACCTCCTTGGAGGATGTGGCTGGGCATAACTaGAGACGGCAACAGCCTCGGGAAAGCCTGAGATAC +
Preference number: 6 (lower is better)
Translates to: LGTSLEDVAGHN*RRQQPRESLRY
Trigger: GTATCTCAGGCTTTCCCGAGGCTGTTGCCGTCTCAAGTTATGCCCAGCCACATCCTCCAAGGAGGTGCCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333673.5
CDS CCA 72 bp ATGGCAGAGGGCGTAAGGAATGGAGGAAATCAACCCTaGTGCAGAGCAATCGAGTCCACAAGGTCCGACGGC +
Preference number: 6 (lower is better)
Translates to: MAEGVRNGGNQP*CRAIESTRSDG
Trigger: GCCGTCGGACCTTGTGGACTCGATTGCTCTGCACCAGGGTTGATTTCCTCCATTCCTTACGCCCTCTGCCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510715.5
ENST00000512552.1
CDS GCA 72 bp CACCTCACGTCACACAGCTGCGGGAAAACTCCACCCTaGGTTTGTGATGCTCACCTCCACAGTGTAACTGAC +
Preference number: 6 (lower is better)
Translates to: HLTSHSCGKTPP*VCDAHLHSVTD
Trigger: GTCAGTTACACTGTGGAGGTGAGCATCACAAACGCAGGGTGGAGTTTTCCCGCAGCTGTGTGACGTGAGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333673.5
CDS GCA 72 bp CACCCCACTGCCATTTACATCACTGGCTCTTACAACTaGAACTGTCACTCAGCACATGGCCACTGCGGGTGT +
Preference number: 6 (lower is better)
Translates to: HPTAIYITGSYN*NCHSAHGHCGC
Trigger: ACACCCGCAGTGGCCATGTGCTGAGTGACAGTTGCAGTTGTAAGAGCCAGTGATGTAAATGGCAGTGGGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505693.5
ENST00000514757.5
CDS GCA 72 bp TCTTTCATTCTTGATCTTGGAGAGCCAGACGACCAATaGACATGGCAGTGGGTGCCTCGACTGCGCACTCAC +
Preference number: 6 (lower is better)
Translates to: SFILDLGEPDDQ*TWQWVPRLRTH
Trigger: GTGAGTGCGCAGTCGAGGCACCCACTGCCATGTGCATTGGTCGTCTGGCTCTCCAAGATCAAGAATGAAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512552.1
CDS GCA 72 bp GGGGGTGGGGCGCCTTACCTTTGTAGTTGTTCTATCTaGAGCACTGACTTCCTAAGGGATTCTTCCAACCTA +
Preference number: 6 (lower is better)
Translates to: GGGAPYLCSCSI*STDFLRDSSNL
Trigger: TAGGTTGGAAGAATCCCTTAGGAAGTCAGTGCTGCAGATAGAACAACTACAAAGGTAAGGCGCCCCACCCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000512552.1
CDS CCA 72 bp TTCTTACACAGACTGTCTATGCTCATGAAGAATGCCTaGATATCTGCGTCGGTCTTTGCCGAGGCAGGCGTC +
Preference number: 6 (lower is better)
Translates to: FLHRLSMLMKNA*ISASVFAEAGV
Trigger: GACGCCTGCCTCGGCAAAGACCGACGCAGATATCCAGGCATTCTTCATGAGCATAGACAGTCTGTGTAAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506730.5
ENST00000508428.5
CDS TCA 72 bp CCCTGGAGTACTTCTTACACAGACTGTCTATGCTCATaGAGAATGCCTGGATATCTGCGTCGGTCTTTGCCG +
Preference number: 6 (lower is better)
Translates to: PWSTSYTDCLCS*RMPGYLRRSLP
Trigger: CGGCAAAGACCGACGCAGATATCCAGGCATTCTTCATGAGCATAGACAGTCTGTGTAAGAAGTACTCCAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506730.5
ENST00000508428.5
CDS TCA 72 bp GCTCTTCCCTCTGCATCTGCAGTCATCTTTCATTCTTaGTCTTGGAGAGCCAGACGACCAATGCACATGGCA +
Preference number: 6 (lower is better)
Translates to: ALPSASAVIFHS*SWRARRPMHMA
Trigger: TGCCATGTGCATTGGTCGTCTGGCTCTCCAAGATCAAGAATGAAAGATGACTGCAGATGCAGAGGGAAGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512552.1
CDS TCA 72 bp CCCTGGAGTACTTCTTACACAGACTGTCTATGCTCATaGAGAATGCCTGGATATCTGCGTCGGTATGCTTTG +
Preference number: 6 (lower is better)
Translates to: PWSTSYTDCLCS*RMPGYLRRYAL
Trigger: CAAAGCATACCGACGCAGATATCCAGGCATTCTTCATGAGCATAGACAGTCTGTGTAAGAAGTACTCCAGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333673.5
ENST00000382968.9
ENST00000433731.7
ENST00000454487.6
ENST00000511620.5
CDS GCA 72 bp AGGTGGACTAATCATGGAGATTCTCGCAGGGCCGGCTaGTATCTCAGACTAAGAATGCAACAAGAAAACAAT +
Preference number: 6 (lower is better)
Translates to: RWTNHGDSRRAG*YLRLRMQQENN
Trigger: ATTGTTTTCTTGTTGCATTCTTAGTCTGAGATAGCAGCCGGCCCTGCGAGAATCTCCATGATTAGTCCACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508633.5
CDS CCA 72 bp TTAATTATTTCAACAAGAGGGAAAGTACAGTCGCACTaGCTGTCTAACGTACACATGCTGGTGGGCACGAAG +
Preference number: 6 (lower is better)
Translates to: LIISTRGKVQSH*LSNVHMLVGTK
Trigger: CTTCGTGCCCACCAGCATGTGTACGTTAGACAGCCAGTGCGACTGTACTTTCCCTCTTGTTGAAATAATTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000503206.5
ENST00000505693.5
ENST00000514024.5
ENST00000514757.5
CDS CCA 72 bp TTCTTACACAGACTGTCTATGCTCATGAAGAATGCCTaGATATCTGCGTCGGTATGCTTTGAAAGCAAAACT +
Preference number: 6 (lower is better)
Translates to: FLHRLSMLMKNA*ISASVCFESKT
Trigger: AGTTTTGCTTTCAAAGCATACCGACGCAGATATCCAGGCATTCTTCATGAGCATAGACAGTCTGTGTAAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333673.5
ENST00000382968.9
ENST00000433731.7
ENST00000454487.6
ENST00000511620.5
CDS TCA 72 bp GGAAGTCGCGGTAAAAACACAACTTTGTCTTTGAAATaGCTTCAAAACTTCACACTAAACACTGCCTCTGCA +
Preference number: 6 (lower is better)
Translates to: GSRGKNTTLSLK*LQNFTLNTASA
Trigger: TGCAGAGGCAGTGTTTAGTGTGAAGTTTTGAAGTCATTTCAAAGACAAAGTTGTGTTTTTACCGCGACTTCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000514024.5
ENST00000514757.5