Pregenerated sensors for RNF19B (Homo sapiens)

Ensembl gene IDs: ENSG00000116514

Ensembl transcript IDs: ENST00000235150.5, ENST00000356990.9, ENST00000373456.11

Found 19 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS GCA 90 bp	TACTTGTGCATAAGCGGCGGGTCGGCGAGCAGCAAGCGGATGTCGTaGGGGTTGAGTCGCTCGCTGCACTCGGGGCAGCTGATGGGCACC	+
Preference number: 5 (lower is better) Translates to: YLCISGGSASSKRMS*GLSRSLHSGQLMGT Trigger: GGTGCCCATCAGCTGCCCCGAGTGCAGCGAGCGACTCAACCCGCACGACATCCGCTTGCTGCTCGCCGACCCGCCGCTTATGCACAAGTA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000235150.5 ENST00000356990.9 ENST00000373456.11
CDS TCA 90 bp	TTTTCCCTTGCCACTGGAGAGAATGCCGCCACTCAGCGTGCCCCCTaGGAGGGCTGCAAAGCTGGCCGTTTCGCTGTAAGGACCTTGCAT	+
Preference number: 5 (lower is better) Translates to: FSLATGENAATQRAP*EGCKAGRFAVRTLH Trigger: ATGCAAGGTCCTTACAGCGAAACGGCCAGCTTTGCAGCCCTCTCAGGGGGCACGCTGAGTGGCGGCATTCTCTCCAGTGGCAAGGGAAAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000235150.5 ENST00000356990.9 ENST00000373456.11
CDS GCA 90 bp	TGCTATATTTTCCCTTGCCACTGGAGAGAATGCCGCCACTCAGCGTaGCCCCTGAGAGGGCTGCAAAGCTGGCCGTTTCGCTGTAAGGAC	+
Preference number: 5 (lower is better) Translates to: CYIFPCHWRECRHSA*PLRGLQSWPFRCKD Trigger: GTCCTTACAGCGAAACGGCCAGCTTTGCAGCCCTCTCAGGGGGCACGCTGAGTGGCGGCATTCTCTCCAGTGGCAAGGGAAAATATAGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000235150.5 ENST00000356990.9 ENST00000373456.11
CDS GCA 90 bp	CTTGAACTTCTAACCTGCTATATTTTCCCTTGCCACTGGAGAGAATaGCGCCACTCAGCGTGCCCCCTGAGAGGGCTGCAAAGCTGGCCG	+
Preference number: 5 (lower is better) Translates to: LELLTCYIFPCHWRE*RHSACPLRGLQSWP Trigger: CGGCCAGCTTTGCAGCCCTCTCAGGGGGCACGCTGAGTGGCGGCATTCTCTCCAGTGGCAAGGGAAAATATAGCAGGTTAGAAGTTCAAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000235150.5 ENST00000356990.9 ENST00000373456.11
CDS GCA 90 bp	GTTGACGGGCCATATCGCATGTCTGATTTGGATGCCATATCTGCTTaGAGTGGTAGCAGAACTCAGTCTGGCAACCTTCCCTCTCACAAG	+
Preference number: 5 (lower is better) Translates to: VDGPYRMSDLDAISA*SGSRTQSGNLPSHK Trigger: CTTGTGAGAGGGAAGGTTGCCAGACTGAGTTCTGCTACCACTGCAAGCAGATATGGCATCCAAATCAGACATGCGATATGGCCCGTCAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000235150.5 ENST00000356990.9 ENST00000373456.11
CDS GCA 90 bp	TGGGTTGTAGGAACTGATTATGGAACCGGCCATAGCACGAGTGCTTaGGTTGTCACTAATTGCACCAAGACTGGCTGTGTCTTTGGGGAA	+
Preference number: 5 (lower is better) Translates to: WVVGTDYGTGHSTSA*VVTNCTKTGCVFGE Trigger: TTCCCCAAAGACACAGCCAGTCTTGGTGCAATTAGTGACAACGCAAGCACTCGTGCTATGGCCGGTTCCATAATCAGTTCCTACAACCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000235150.5 ENST00000356990.9 ENST00000373456.11
CDS CAA 72 bp	GGCGGGTCGGCGAGCAGCAAGCGGATGTCGTGCGGGTaGAGTCGCTCGCTGCACTCGGGGCAGCTGATGGGC	+
Preference number: 6 (lower is better) Translates to: GGSASSKRMSCG*SRSLHSGQLMG Trigger: GCCCATCAGCTGCCCCGAGTGCAGCGAGCGACTCAACCCGCACGACATCCGCTTGCTGCTCGCCGACCCGCC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000235150.5 ENST00000356990.9 ENST00000373456.11
CDS CAA 90 bp	TGCATAAGCGGCGGGTCGGCGAGCAGCAAGCGGATGTCGTGCGGGTaGAGTCGCTCGCTGCACTCGGGGCAGCTGATGGGCACCCTGCTC	+
Preference number: 6 (lower is better) Translates to: CISGGSASSKRMSCG*SRSLHSGQLMGTLL Trigger: GAGCAGGGTGCCCATCAGCTGCCCCGAGTGCAGCGAGCGACTCAACCCGCACGACATCCGCTTGCTGCTCGCCGACCCGCCGCTTATGCA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000235150.5 ENST00000356990.9 ENST00000373456.11
CDS GCA 72 bp	ATAAGCGGCGGGTCGGCGAGCAGCAAGCGGATGTCGTaGGGGTTGAGTCGCTCGCTGCACTCGGGGCAGCTG	+
Preference number: 6 (lower is better) Translates to: ISGGSASSKRMS*GLSRSLHSGQL Trigger: CAGCTGCCCCGAGTGCAGCGAGCGACTCAACCCGCACGACATCCGCTTGCTGCTCGCCGACCCGCCGCTTAT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000235150.5 ENST00000356990.9 ENST00000373456.11
CDS TCA 72 bp	GCCACTGGAGAGAATGCCGCCACTCAGCGTGCCCCCTaGGAGGGCTGCAAAGCTGGCCGTTTCGCTGTAAGG	+
Preference number: 6 (lower is better) Translates to: ATGENAATQRAP*EGCKAGRFAVR Trigger: CCTTACAGCGAAACGGCCAGCTTTGCAGCCCTCTCAGGGGGCACGCTGAGTGGCGGCATTCTCTCCAGTGGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000235150.5 ENST00000356990.9 ENST00000373456.11
CDS GCA 72 bp	CTAACCTGCTATATTTTCCCTTGCCACTGGAGAGAATaGCGCCACTCAGCGTGCCCCCTGAGAGGGCTGCAA	+
Preference number: 6 (lower is better) Translates to: LTCYIFPCHWRE*RHSACPLRGLQ Trigger: TTGCAGCCCTCTCAGGGGGCACGCTGAGTGGCGGCATTCTCTCCAGTGGCAAGGGAAAATATAGCAGGTTAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000235150.5 ENST00000356990.9 ENST00000373456.11
CDS GCA 72 bp	CATCGGCTTGAACTTCTAACCTGCTATATTTTCCCTTaGCACTGGAGAGAATGCCGCCACTCAGCGTGCCCC	+
Preference number: 6 (lower is better) Translates to: HRLELLTCYIFP*HWRECRHSACP Trigger: GGGGCACGCTGAGTGGCGGCATTCTCTCCAGTGGCAAGGGAAAATATAGCAGGTTAGAAGTTCAAGCCGATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000235150.5 ENST00000356990.9 ENST00000373456.11
CDS CAA 72 bp	GAGGGCTGCAAAGCTGGCCGTTTCGCTGTAAGGACCTaGCATAACACTAAGTCCATCTGTAGGGCTTCCACT	+
Preference number: 6 (lower is better) Translates to: EGCKAGRFAVRT*HNTKSICRAST Trigger: AGTGGAAGCCCTACAGATGGACTTAGTGTTATGCAAGGTCCTTACAGCGAAACGGCCAGCTTTGCAGCCCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000235150.5 ENST00000356990.9 ENST00000373456.11
CDS GCA 72 bp	GGAACTGATTATGGAACCGGCCATAGCACGAGTGCTTaGGTTGTCACTAATTGCACCAAGACTGGCTGTGTC	+
Preference number: 6 (lower is better) Translates to: GTDYGTGHSTSA*VVTNCTKTGCV Trigger: GACACAGCCAGTCTTGGTGCAATTAGTGACAACGCAAGCACTCGTGCTATGGCCGGTTCCATAATCAGTTCC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000235150.5 ENST00000356990.9 ENST00000373456.11
CDS GCA 72 bp	CCATATCGCATGTCTGATTTGGATGCCATATCTGCTTaGAGTGGTAGCAGAACTCAGTCTGGCAACCTTCCC	+
Preference number: 6 (lower is better) Translates to: PYRMSDLDAISA*SGSRTQSGNLP Trigger: GGGAAGGTTGCCAGACTGAGTTCTGCTACCACTGCAAGCAGATATGGCATCCAAATCAGACATGCGATATGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000235150.5 ENST00000356990.9 ENST00000373456.11
CDS GCA 72 bp	ACCGGCCATAGCACGAGTGCTTGCGTTGTCACTAATTaGACCAAGACTGGCTGTGTCTTTGGGGAAAATTTC	+
Preference number: 6 (lower is better) Translates to: TGHSTSACVVTN*TKTGCVFGENF Trigger: GAAATTTTCCCCAAAGACACAGCCAGTCTTGGTGCAATTAGTGACAACGCAAGCACTCGTGCTATGGCCGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000235150.5 ENST00000356990.9 ENST00000373456.11
CDS CAA 72 bp	CTGATTATGGAACCGGCCATAGCACGAGTGCTTGCGTaGTCACTAATTGCACCAAGACTGGCTGTGTCTTTG	+
Preference number: 6 (lower is better) Translates to: LIMEPAIARVLA*SLIAPRLAVSL Trigger: CAAAGACACAGCCAGTCTTGGTGCAATTAGTGACAACGCAAGCACTCGTGCTATGGCCGGTTCCATAATCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000235150.5 ENST00000356990.9 ENST00000373456.11
CDS CCA 72 bp	ATTCATCTTGATAATGTATGCACTGCATCGTGGGCATaGCTTGATGTCATCTGCTGGTCCAGATTCTTGCCC	+
Preference number: 6 (lower is better) Translates to: IHLDNVCTASWA*LDVICWSRFLP Trigger: GGGCAAGAATCTGGACCAGCAGATGACATCAAGCCATGCCCACGATGCAGTGCATACATTATCAAGATGAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373456.11
CDS CCA 72 bp	ATTCATCTTGATAATGTATGCACTGCATCGTGGGCATaGCTTGATGTCATCTGGTCCAGATTCTTGCCCATA	+
Preference number: 6 (lower is better) Translates to: IHLDNVCTASWA*LDVIWSRFLPI Trigger: TATGGGCAAGAATCTGGACCAGATGACATCAAGCCATGCCCACGATGCAGTGCATACATTATCAAGATGAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000235150.5 ENST00000356990.9

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