RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RNF19A (Homo sapiens)

Ensembl gene IDs: ENSG00000034677

Ensembl transcript IDs: ENST00000341084.7, ENST00000432381.2, ENST00000517584.5, ENST00000519342.1, ENST00000519449.5, ENST00000519527.5, ENST00000520071.1, ENST00000520903.1, ENST00000522182.1, ENST00000522369.5, ENST00000523167.1, ENST00000523255.5, ENST00000523481.5, ENST00000523644.1, ENST00000524233.1

Found 305 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CTAATCATACATGGACCTTTTGTACTTGGTACAAGTTCTGCACCGTaGTTTGATTTCATGGTTGGAGAAGATATGCATGTGTTAAAAACT +
Preference number: 1 (lower is better)
Translates to: LIIHGPFVLGTSSAP*FDFMVGEDMHVLKT
Trigger: AGTTTTTAACACATGCATATCTTCTCCAACCATGAAATCAAAGCACGGTGCAGAACTTGTACCAAGTACAAAAGGTCCATGTATGATTAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341084.7
ENST00000519449.5
3UTR-3UTR TCA 90 bp TTGTACTTGGTACAAGTTCTGCACCGTGCTTTGATTTCATGGTTGGAGAAGATACTTTTGCTGGTAACCTaGAACTTAAGTAGTCACATG +
Preference number: 2 (lower is better)
Translates to: LYLVQVLHRALISWLEKILLLVT*NLSSHM
Trigger: CATGTGACTACTTAAGTTTCAGGTTACCAGCAAAAG...TATCTTCTCCAACCATGAAATCAAAGCACGGTGCAGAACTTGTACCAAGTACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341084.7
ENST00000519449.5
3UTR-3UTR TCA 90 bp TTATACAGGAAATTAACAGTACAGGCAGTATTTTGGCCAACTTCTGCTTATGTCTTCTGCACCGTGCTTTaGTTTCATGGTTGGAGAAGA +
Preference number: 2 (lower is better)
Translates to: LYRKLTVQAVFWPTSAYVFCTVL*FHGWRR
Trigger: TCTTCTCCAACCATGAAATCAAAGCACGGTGCAGAA...GACATAAGCAGAAGTTGGCCAAAATACTGCCTGTACTGTTAATTTCCTGTATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341084.7
ENST00000519449.5
3UTR-3UTR GCA 90 bp ATGGACCTTTTGTACTTGGTACAAGTTCTGCACCGTGCTTTGATTTCATGGTTGAAACTGCCACAATCTTaGTCAAAGTGTCTAAGTATC +
Preference number: 2 (lower is better)
Translates to: MDLLYLVQVLHRALISWLKLPQS*SKCLSI
Trigger: GATACTTAGACACTTTGAGCAAGATTGTGGCAGTTT...CAACCATGAAATCAAAGCACGGTGCAGAACTTGTACCAAGTACAAAAGGTCCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341084.7
ENST00000519449.5
3UTR-3UTR GCA 90 bp ATGGACCTTTTGTACTTGGTACAAGTTCTGCACCGTGCTTTGATTTCATGGTTGAAGTTGTGCAAAAACTaGCACAATCTTGCTCAAAGT +
Preference number: 2 (lower is better)
Translates to: MDLLYLVQVLHRALISWLKLCKN*HNLAQS
Trigger: ACTTTGAGCAAGATTGTGGCAGTTTTTGCACAACTT...CAACCATGAAATCAAAGCACGGTGCAGAACTTGTACCAAGTACAAAAGGTCCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341084.7
ENST00000519449.5
3UTR-3UTR CCA 90 bp TTATACAGGAAATTAACAGTACAGGCAGTATTTTGGCCAACTTCTGCTTATGTCGGCACCAAGAATCAATaGGGTACAAACTTCCCCTTA +
Preference number: 2 (lower is better)
Translates to: LYRKLTVQAVFWPTSAYVGTKNQ*GTNFPL
Trigger: TAAGGGGAAGTTTGTACCCCATTGATTCTTGGTGCC...GACATAAGCAGAAGTTGGCCAAAATACTGCCTGTACTGTTAATTTCCTGTATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341084.7
ENST00000519449.5
3UTR-3UTR TCA 90 bp TTATACAGGAAATTAACAGTACAGGCAGTATTTTGGCCAACTTCTGCTTATGTCCACACAATGCCTTGCTaGACACAGAAAATGTATCTG +
Preference number: 2 (lower is better)
Translates to: LYRKLTVQAVFWPTSAYVHTMPC*TQKMYL
Trigger: CAGATACATTTTCTGTGTTCAGCAAGGCATTGTGTG...GACATAAGCAGAAGTTGGCCAAAATACTGCCTGTACTGTTAATTTCCTGTATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341084.7
ENST00000519449.5
3UTR-3UTR GCA 90 bp TTATACAGGAAATTAACAGTACAGGCAGTATTTTGGCCAACTTCTGCTTATGTCCCACATGACACACAATaGCTTGCTGAACACAGAAAA +
Preference number: 2 (lower is better)
Translates to: LYRKLTVQAVFWPTSAYVPHDTQ*LAEHRK
Trigger: TTTTCTGTGTTCAGCAAGGCATTGTGTGTCATGTGG...GACATAAGCAGAAGTTGGCCAAAATACTGCCTGTACTGTTAATTTCCTGTATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341084.7
ENST00000519449.5
3UTR-3UTR GCA 90 bp GCCAACTTCTGCTTATGTCAGCTGAACATTGTCCATAAACAAAAGCAAAAGAAAACAAGTTCTGCACCGTaGTTTGATTTCATGGTTGGA +
Preference number: 2 (lower is better)
Translates to: ANFCLCQLNIVHKQKQKKTSSAP*FDFMVG
Trigger: TCCAACCATGAAATCAAAGCACGGTGCAGAACTTGT...TTTCTTTTGCTTTTGTTTATGGACAATGTTCAGCTGACATAAGCAGAAGTTGGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000341084.7
ENST00000519449.5
3UTR-3UTR CCA 90 bp TTGTACTTGGTACAAGTTCTGCACCGTGCTTTGATTTCATGGTTGGAGAAGATATCAAGCAATGTTTTGTaGCAAACACACAAAACATGC +
Preference number: 2 (lower is better)
Translates to: LYLVQVLHRALISWLEKISSNVL*QTHKTC
Trigger: GCATGTTTTGTGTGTTTGCCACAAAACATTGCTTGA...TATCTTCTCCAACCATGAAATCAAAGCACGGTGCAGAACTTGTACCAAGTACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341084.7
ENST00000519449.5
3UTR-3UTR TCA 90 bp AAAATAATGCTAATCATACATGGACCTTTTGTACTTGGTACAAGTTCTGCACCGCTTTTGCTGGTAACCTaGAACTTAAGTAGTCACATG +
Preference number: 2 (lower is better)
Translates to: KIMLIIHGPFVLGTSSAPLLLVT*NLSSHM
Trigger: CATGTGACTACTTAAGTTTCAGGTTACCAGCAAAAG...CGGTGCAGAACTTGTACCAAGTACAAAAGGTCCATGTATGATTAGCATTATTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000341084.7
ENST00000519449.5
3UTR-3UTR TCA 90 bp AAAATAACTGGCACTAGTGTTATAAGCATATTAATGGACCTGGTAGGGAAAAGTCACACAATGCCTTGCTaGACACAGAAAATGTATCTG +
Preference number: 2 (lower is better)
Translates to: KITGTSVISILMDLVGKSHTMPC*TQKMYL
Trigger: CAGATACATTTTCTGTGTTCAGCAAGGCATTGTGTG...ACTTTTCCCTACCAGGTCCATTAATATGCTTATAACACTAGTGCCAGTTATTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000341084.7
ENST00000519449.5
3UTR-3UTR GCA 90 bp AAAATAACTGGCACTAGTGTTATAAGCATATTAATGGACCTGGTAGGGAAAAGTCCACATGACACACAATaGCTTGCTGAACACAGAAAA +
Preference number: 2 (lower is better)
Translates to: KITGTSVISILMDLVGKSPHDTQ*LAEHRK
Trigger: TTTTCTGTGTTCAGCAAGGCATTGTGTGTCATGTGG...ACTTTTCCCTACCAGGTCCATTAATATGCTTATAACACTAGTGCCAGTTATTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341084.7
ENST00000519449.5
3UTR-3UTR GCA 90 bp AAAATAACTGGCACTAGTGTTATAAGCATATTAATGGACCTGGTAGGGAAAAGTACAAGTTCTGCACCGTaGTTTGATTTCATGGTTGGA +
Preference number: 2 (lower is better)
Translates to: KITGTSVISILMDLVGKSTSSAP*FDFMVG
Trigger: TCCAACCATGAAATCAAAGCACGGTGCAGAACTTGT...ACTTTTCCCTACCAGGTCCATTAATATGCTTATAACACTAGTGCCAGTTATTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341084.7
ENST00000519449.5
3UTR-3UTR CCA 90 bp GCCAACTTCTGCTTATGTCAGCTGAACATTGTCCATAAACAAAAGCAAAAGAAATCAAGCAATGTTTTGTaGCAAACACACAAAACATGC +
Preference number: 2 (lower is better)
Translates to: ANFCLCQLNIVHKQKQKKSSNVL*QTHKTC
Trigger: GCATGTTTTGTGTGTTTGCCACAAAACATTGCTTGA...TTTCTTTTGCTTTTGTTTATGGACAATGTTCAGCTGACATAAGCAGAAGTTGGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000341084.7
ENST00000519449.5
3UTR-3UTR TCA 90 bp AAAATAACTGGCACTAGTGTTATAAGCATATTAATGGACCTGGTAGGGAAAAGTCCAAATGGTAGCAAATaGGCTGCATTAAGCTTTATA +
Preference number: 2 (lower is better)
Translates to: KITGTSVISILMDLVGKSPNGSK*AALSFI
Trigger: TATAAAGCTTAATGCAGCTCATTTGCTACCATTTGG...ACTTTTCCCTACCAGGTCCATTAATATGCTTATAACACTAGTGCCAGTTATTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341084.7
ENST00000519449.5
3UTR-3UTR TCA 90 bp AAAATAACTGGCACTAGTGTTATAAGCATATTAATGGACCTGGTAGGGAAAAGTTCTGCTTATGTCAGCTaGACATTGTCCATAAACAAA +
Preference number: 2 (lower is better)
Translates to: KITGTSVISILMDLVGKSSAYVS*TLSINK
Trigger: TTTGTTTATGGACAATGTTCAGCTGACATAAGCAGA...ACTTTTCCCTACCAGGTCCATTAATATGCTTATAACACTAGTGCCAGTTATTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341084.7
ENST00000519449.5
3UTR-3UTR GCA 90 bp AAAATAACTGGCACTAGTGTTATAAGCATATTAATGGACCTGGTAGGGAAAAGTAAACTGCCACAATCTTaGTCAAAGTGTCTAAGTATC +
Preference number: 2 (lower is better)
Translates to: KITGTSVISILMDLVGKSKLPQS*SKCLSI
Trigger: GATACTTAGACACTTTGAGCAAGATTGTGGCAGTTT...ACTTTTCCCTACCAGGTCCATTAATATGCTTATAACACTAGTGCCAGTTATTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341084.7
ENST00000519449.5
3UTR GCA 72 bp CATGGACCTTTTGTACTTGGTACAAGTTCTGCACCGTaGTTTGATTTCATGGTTGGAGAAGATATGCATGTG +
Preference number: 3 (lower is better)
Translates to: HGPFVLGTSSAP*FDFMVGEDMHV
Trigger: CACATGCATATCTTCTCCAACCATGAAATCAAAGCACGGTGCAGAACTTGTACCAAGTACAAAAGGTCCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341084.7
ENST00000519449.5
3UTR-3UTR CAA 90 bp TTGGTAACTAAGATCCACATGACACACAATGCCTTGCTGAACACAGAAAATGTACAGCTCCAAACACGGTaGTACAGTGGTAATTATTCT +
Preference number: 3 (lower is better)
Translates to: LVTKIHMTHNALLNTENVQLQTR*YSGNYS
Trigger: AGAATAATTACCACTGTACAACCGTGTTTGGAGCTG...TACATTTTCTGTGTTCAGCAAGGCATTGTGTGTCATGTGGATCTTAGTTACCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341084.7
ENST00000519449.5
3UTR-3UTR CAA 90 bp ATGGACCTTTTGTACTTGGTACAAGTTCTGCACCGTGCTTTGATTTCATGGTTGAAAACTGCCACAATCTaGCTCAAAGTGTCTAAGTAT +
Preference number: 3 (lower is better)
Translates to: MDLLYLVQVLHRALISWLKTATI*LKVSKY
Trigger: ATACTTAGACACTTTGAGCAAGATTGTGGCAGTTTT...CAACCATGAAATCAAAGCACGGTGCAGAACTTGTACCAAGTACAAAAGGTCCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341084.7
ENST00000519449.5
3UTR-3UTR CAA 90 bp AAAATAACTGGCACTAGTGTTATAAGCATATTAATGGACCTGGTAGGGAAAAGTGTTCTGCACCGTGCTTaGATTTCATGGTTGGAGAAG +
Preference number: 3 (lower is better)
Translates to: KITGTSVISILMDLVGKSVLHRA*ISWLEK
Trigger: CTTCTCCAACCATGAAATCAAAGCACGGTGCAGAAC...ACTTTTCCCTACCAGGTCCATTAATATGCTTATAACACTAGTGCCAGTTATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341084.7
ENST00000519449.5
3UTR TCA 72 bp TGTTATAAGCATATTAATGGACCTGGTAGGGAAAAGTaGTGGAAGAAGACTGCAGCCCATGGCATTTTTCTT +
Preference number: 3 (lower is better)
Translates to: CYKHINGPGREK*WKKTAAHGIFL
Trigger: AAGAAAAATGCCATGGGCTGCAGTCTTCTTCCATCACTTTTCCCTACCAGGTCCATTAATATGCTTATAACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341084.7
ENST00000519449.5
3UTR-3UTR CAA 90 bp GCCAACTTCTGCTTATGTCAGCTGAACATTGTCCATAAACAAAAGCAAAAGAAACAGCTCCAAACACGGTaGTACAGTGGTAATTATTCT +
Preference number: 3 (lower is better)
Translates to: ANFCLCQLNIVHKQKQKKQLQTR*YSGNYS
Trigger: AGAATAATTACCACTGTACAACCGTGTTTGGAGCTG...TTTCTTTTGCTTTTGTTTATGGACAATGTTCAGCTGACATAAGCAGAAGTTGGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341084.7
ENST00000519449.5
3UTR-3UTR CAA 90 bp GCCAACTTCTGCTTATGTCAGCTGAACATTGTCCATAAACAAAAGCAAAAGAAACCTTCACTTCATAGTTaGGTAACTAAGATCCACATG +
Preference number: 3 (lower is better)
Translates to: ANFCLCQLNIVHKQKQKKPSLHS*VTKIHM
Trigger: CATGTGGATCTTAGTTACCAAACTATGAAGTGAAGG...TTTCTTTTGCTTTTGTTTATGGACAATGTTCAGCTGACATAAGCAGAAGTTGGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341084.7
ENST00000519449.5
3UTR-3UTR CAA 90 bp TTATACAGGAAATTAACAGTACAGGCAGTATTTTGGCCAACTTCTGCTTATGTCTCATACATGGACCTTTaGTACTTGGTACAAGTTCTG +
Preference number: 3 (lower is better)
Translates to: LYRKLTVQAVFWPTSAYVSYMDL*YLVQVL
Trigger: CAGAACTTGTACCAAGTACAAAAGGTCCATGTATGA...GACATAAGCAGAAGTTGGCCAAAATACTGCCTGTACTGTTAATTTCCTGTATAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341084.7
ENST00000519449.5
3UTR-3UTR CAA 90 bp GCCAACTTCTGCTTATGTCAGCTGAACATTGTCCATAAACAAAAGCAAAAGAAAAAAACTGCCACAATCTaGCTCAAAGTGTCTAAGTAT +
Preference number: 3 (lower is better)
Translates to: ANFCLCQLNIVHKQKQKKKTATI*LKVSKY
Trigger: ATACTTAGACACTTTGAGCAAGATTGTGGCAGTTTT...TTTCTTTTGCTTTTGTTTATGGACAATGTTCAGCTGACATAAGCAGAAGTTGGC
37% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000341084.7
ENST00000519449.5
CDS-3UTR CCA 90 bp TTATACAGGAAATTAACAGTACAGGCAGTATTTTGGCCAACTTCTGCTTATGTCGGCGGCAGCGCAGGGTaGCGGGCGAGTAGGCCCATC +
Preference number: 4 (lower is better)
Translates to: LYRKLTVQAVFWPTSAYVGGSAG*RASRPI
Trigger: GATGGGCCTACTCGCCCGCCACCCTGCGCTGCCGCC...GACATAAGCAGAAGTTGGCCAAAATACTGCCTGTACTGTTAATTTCCTGTATAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341084.7
CDS-3UTR TCA 90 bp TTGGTAACTAAGATCCACATGACACACAATGCCTTGCTGAACACAGAAAATGTAGATGAACCGCCAGCATaGCTTCGGGTGGCACTGCCA +
Preference number: 4 (lower is better)
Translates to: LVTKIHMTHNALLNTENVDEPPA*LRVALP
Trigger: TGGCAGTGCCACCCGAAGTCATGCTGGCGGTTCATC...TACATTTTCTGTGTTCAGCAAGGCATTGTGTGTCATGTGGATCTTAGTTACCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341084.7
ENST00000519449.5
CDS-3UTR TCA 90 bp TTGTACTTGGTACAAGTTCTGCACCGTGCTTTGATTTCATGGTTGGAGAAGATAGTATTCCACCCTGGGTaGCACAGTGAGGCCCTGTCT +
Preference number: 4 (lower is better)
Translates to: LYLVQVLHRALISWLEKIVFHPG*HSEALS
Trigger: AGACAGGGCCTCACTGTGTCACCCAGGGTGGAATAC...TATCTTCTCCAACCATGAAATCAAAGCACGGTGCAGAACTTGTACCAAGTACAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519449.5
CDS-3UTR GCA 90 bp ATGGACCTTTTGTACTTGGTACAAGTTCTGCACCGTGCTTTGATTTCATGGTTGCAGCTAGTGCCATGGTaGTGGCCGTTTCACTCAGGT +
Preference number: 4 (lower is better)
Translates to: MDLLYLVQVLHRALISWLQLVPW*WPFHSG
Trigger: ACCTGAGTGAAACGGCCAGCACCATGGCACTAGCTG...CAACCATGAAATCAAAGCACGGTGCAGAACTTGTACCAAGTACAAAAGGTCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341084.7
ENST00000519449.5
CDS-3UTR CCA 90 bp ATGGACCTTTTGTACTTGGTACAAGTTCTGCACCGTGCTTTGATTTCATGGTTGCTTCAGGCAAGCCACTaGATGAACCGCCAGCATGAC +
Preference number: 4 (lower is better)
Translates to: MDLLYLVQVLHRALISWLLQASH*MNRQHD
Trigger: GTCATGCTGGCGGTTCATCCAGTGGCTTGCCTGAAG...CAACCATGAAATCAAAGCACGGTGCAGAACTTGTACCAAGTACAAAAGGTCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341084.7
ENST00000519449.5
CDS-3UTR TCA 90 bp ATGGACCTTTTGTACTTGGTACAAGTTCTGCACCGTGCTTTGATTTCATGGTTGTTTTCCATTGCCTGCTaGGACTCCACAACCTCCGCT +
Preference number: 4 (lower is better)
Translates to: MDLLYLVQVLHRALISWLFSIAC*DSTTSA
Trigger: AGCGGAGGTTGTGGAGTCTCAGCAGGCAATGGAAAA...CAACCATGAAATCAAAGCACGGTGCAGAACTTGTACCAAGTACAAAAGGTCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341084.7
ENST00000519449.5
CDS-3UTR TCA 90 bp AAAATAATGCTAATCATACATGGACCTTTTGTACTTGGTACAAGTTCTGCACCGGATGAACCGCCAGCATaGCTTCGGGTGGCACTGCCA +
Preference number: 4 (lower is better)
Translates to: KIMLIIHGPFVLGTSSAPDEPPA*LRVALP
Trigger: TGGCAGTGCCACCCGAAGTCATGCTGGCGGTTCATC...CGGTGCAGAACTTGTACCAAGTACAAAAGGTCCATGTATGATTAGCATTATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341084.7
ENST00000519449.5
CDS-3UTR TCA 90 bp TTGGTAACTAAGATCCACATGACACACAATGCCTTGCTGAACACAGAAAATGTAAGGCAAGCCACTGGATaGACCGCCAGCATGACTTCG +
Preference number: 4 (lower is better)
Translates to: LVTKIHMTHNALLNTENVRQATG*TASMTS
Trigger: CGAAGTCATGCTGGCGGTTCATCCAGTGGCTTGCCT...TACATTTTCTGTGTTCAGCAAGGCATTGTGTGTCATGTGGATCTTAGTTACCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341084.7
ENST00000519449.5
CDS-3UTR TCA 90 bp TTATACAGGAAATTAACAGTACAGGCAGTATTTTGGCCAACTTCTGCTTATGTCGGTGGCAGGGTTGCTTaGGCCCAGGAATTCCAGGCT +
Preference number: 4 (lower is better)
Translates to: LYRKLTVQAVFWPTSAYVGGRVA*AQEFQA
Trigger: AGCCTGGAATTCCTGGGCTCAAGCAACCCTGCCACC...GACATAAGCAGAAGTTGGCCAAAATACTGCCTGTACTGTTAATTTCCTGTATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519449.5
CDS-3UTR CCA 90 bp ATGGACCTTTTGTACTTGGTACAAGTTCTGCACCGTGCTTTGATTTCATGGTTGCTAGTGCCATGGTGCTaGCCGTTTCACTCAGGTTGT +
Preference number: 4 (lower is better)
Translates to: MDLLYLVQVLHRALISWLLVPWC*PFHSGC
Trigger: ACAACCTGAGTGAAACGGCCAGCACCATGGCACTAG...CAACCATGAAATCAAAGCACGGTGCAGAACTTGTACCAAGTACAAAAGGTCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341084.7
ENST00000519449.5
CDS-3UTR TCA 90 bp TTGTACTTGGTACAAGTTCTGCACCGTGCTTTGATTTCATGGTTGGAGAAGATACCTGGTAGGGAAAAGTaGTGGAAGAAGACTGCAGCC +
Preference number: 4 (lower is better)
Translates to: LYLVQVLHRALISWLEKIPGREK*WKKTAA
Trigger: GGCTGCAGTCTTCTTCCATCACTTTTCCCTACCAGG...TATCTTCTCCAACCATGAAATCAAAGCACGGTGCAGAACTTGTACCAAGTACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341084.7
ENST00000519449.5
CDS-3UTR GCA 90 bp ATGGACCTTTTGTACTTGGTACAAGTTCTGCACCGTGCTTTGATTTCATGGTTGCACTTCCCTCCCCTATaGTTGGGTTGTGTCTTGCTT +
Preference number: 4 (lower is better)
Translates to: MDLLYLVQVLHRALISWLHFPPL*LGCVLL
Trigger: AAGCAAGACACAACCCAAGCATAGGGGAGGGAAGTG...CAACCATGAAATCAAAGCACGGTGCAGAACTTGTACCAAGTACAAAAGGTCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341084.7
ENST00000519449.5
CDS-3UTR GCA 90 bp TTGTACTTGGTACAAGTTCTGCACCGTGCTTTGATTTCATGGTTGGAGAAGATACACTTGCACTCAAACTaGCAGTCAGCCCACCAACAC +
Preference number: 4 (lower is better)
Translates to: LYLVQVLHRALISWLEKIHLHSN*QSAHQH
Trigger: GTGTTGGTGGGCTGACTGGCAGTTTGAGTGCAAGTG...TATCTTCTCCAACCATGAAATCAAAGCACGGTGCAGAACTTGTACCAAGTACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341084.7
ENST00000519449.5
CDS-3UTR GCA 90 bp TTGGTAACTAAGATCCACATGACACACAATGCCTTGCTGAACACAGAAAATGTACAGCTAGTGCCATGGTaGTGGCCGTTTCACTCAGGT +
Preference number: 4 (lower is better)
Translates to: LVTKIHMTHNALLNTENVQLVPW*WPFHSG
Trigger: ACCTGAGTGAAACGGCCAGCACCATGGCACTAGCTG...TACATTTTCTGTGTTCAGCAAGGCATTGTGTGTCATGTGGATCTTAGTTACCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341084.7
ENST00000519449.5
CDS-3UTR CCA 90 bp TTGGTAACTAAGATCCACATGACACACAATGCCTTGCTGAACACAGAAAATGTACTCCAGCTAGTGCCATaGTGCTGGCCGTTTCACTCA +
Preference number: 4 (lower is better)
Translates to: LVTKIHMTHNALLNTENVLQLVP*CWPFHS
Trigger: TGAGTGAAACGGCCAGCACCATGGCACTAGCTGGAG...TACATTTTCTGTGTTCAGCAAGGCATTGTGTGTCATGTGGATCTTAGTTACCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341084.7
ENST00000519449.5
CDS-3UTR CCA 90 bp TTGGTAACTAAGATCCACATGACACACAATGCCTTGCTGAACACAGAAAATGTAGACTCCCCGTTATACTaGCTCCAGCTAGTGCCATGG +
Preference number: 4 (lower is better)
Translates to: LVTKIHMTHNALLNTENVDSPLY*LQLVPW
Trigger: CCATGGCACTAGCTGGAGCCAGTATAACGGGGAGTC...TACATTTTCTGTGTTCAGCAAGGCATTGTGTGTCATGTGGATCTTAGTTACCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341084.7
ENST00000519449.5
CDS-3UTR TCA 90 bp TTGGTAACTAAGATCCACATGACACACAATGCCTTGCTGAACACAGAAAATGTATTTTCCATTGCCTGCTaGGACTCCACAACCTCCGCT +
Preference number: 4 (lower is better)
Translates to: LVTKIHMTHNALLNTENVFSIAC*DSTTSA
Trigger: AGCGGAGGTTGTGGAGTCTCAGCAGGCAATGGAAAA...TACATTTTCTGTGTTCAGCAAGGCATTGTGTGTCATGTGGATCTTAGTTACCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341084.7
ENST00000519449.5
CDS-3UTR TCA 90 bp AAAATAACTGGCACTAGTGTTATAAGCATATTAATGGACCTGGTAGGGAAAAGTAGGCAAGCCACTGGATaGACCGCCAGCATGACTTCG +
Preference number: 4 (lower is better)
Translates to: KITGTSVISILMDLVGKSRQATG*TASMTS
Trigger: CGAAGTCATGCTGGCGGTTCATCCAGTGGCTTGCCT...ACTTTTCCCTACCAGGTCCATTAATATGCTTATAACACTAGTGCCAGTTATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341084.7
ENST00000519449.5
CDS-3UTR GCA 90 bp ATGGACCTTTTGTACTTGGTACAAGTTCTGCACCGTGCTTTGATTTCATGGTTGCCTACAATCAGGATCTaGAACAAGCCACCGTCTAAG +
Preference number: 4 (lower is better)
Translates to: MDLLYLVQVLHRALISWLPTIRI*NKPPSK
Trigger: CTTAGACGGTGGCTTGTTGCAGATCCTGATTGTAGG...CAACCATGAAATCAAAGCACGGTGCAGAACTTGTACCAAGTACAAAAGGTCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341084.7
ENST00000519449.5
CDS-3UTR GCA 90 bp TTGTACTTGGTACAAGTTCTGCACCGTGCTTTGATTTCATGGTTGGAGAAGATACATGTGGCTTCCACTTaGACTCAAACTGCCAGTCAG +
Preference number: 4 (lower is better)
Translates to: LYLVQVLHRALISWLEKIHVAST*TQTASQ
Trigger: CTGACTGGCAGTTTGAGTGCAAGTGGAAGCCACATG...TATCTTCTCCAACCATGAAATCAAAGCACGGTGCAGAACTTGTACCAAGTACAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341084.7
ENST00000519449.5
CDS-3UTR GCA 90 bp GCCAACTTCTGCTTATGTCAGCTGAACATTGTCCATAAACAAAAGCAAAAGAAAGACTTCGGGTGGCACTaGCATCATCCACACTACTGC +
Preference number: 4 (lower is better)
Translates to: ANFCLCQLNIVHKQKQKKDFGWH*HHPHYC
Trigger: GCAGTAGTGTGGATGATGGCAGTGCCACCCGAAGTC...TTTCTTTTGCTTTTGTTTATGGACAATGTTCAGCTGACATAAGCAGAAGTTGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341084.7
ENST00000519449.5
CDS-3UTR GCA 90 bp AAAATAATGCTAATCATACATGGACCTTTTGTACTTGGTACAAGTTCTGCACCGCTGAGGTGGCAGGGTTaGTTGAGCCCAGGAATTCCA +
Preference number: 4 (lower is better)
Translates to: KIMLIIHGPFVLGTSSAPLRWQG*LSPGIP
Trigger: TGGAATTCCTGGGCTCAAGCAACCCTGCCACCTCAG...CGGTGCAGAACTTGTACCAAGTACAAAAGGTCCATGTATGATTAGCATTATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519449.5
CDS-3UTR CCA 90 bp TTGGTAACTAAGATCCACATGACACACAATGCCTTGCTGAACACAGAAAATGTATCCACAGTCTGGAGCTaGACACCACCTACAATCAGG +
Preference number: 4 (lower is better)
Translates to: LVTKIHMTHNALLNTENVSTVWS*TPPTIR
Trigger: CCTGATTGTAGGTGGTGTCCAGCTCCAGACTGTGGA...TACATTTTCTGTGTTCAGCAAGGCATTGTGTGTCATGTGGATCTTAGTTACCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341084.7
ENST00000519449.5
CDS-3UTR CCA 90 bp TTGTACTTGGTACAAGTTCTGCACCGTGCTTTGATTTCATGGTTGGAGAAGATAAGCATATCCACAGTCTaGAGCTGGACACCACCTACA +
Preference number: 4 (lower is better)
Translates to: LYLVQVLHRALISWLEKISISTV*SWTPPT
Trigger: TGTAGGTGGTGTCCAGCTCCAGACTGTGGATATGCT...TATCTTCTCCAACCATGAAATCAAAGCACGGTGCAGAACTTGTACCAAGTACAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341084.7
ENST00000519449.5
CDS-3UTR CCA 90 bp TTGGTAACTAAGATCCACATGACACACAATGCCTTGCTGAACACAGAAAATGTATCCCTCCCCTATGCTTaGGTTGTGTCTTGCTTCTGC +
Preference number: 4 (lower is better)
Translates to: LVTKIHMTHNALLNTENVSLPYA*VVSCFC
Trigger: GCAGAAGCAAGACACAACCCAAGCATAGGGGAGGGA...TACATTTTCTGTGTTCAGCAAGGCATTGTGTGTCATGTGGATCTTAGTTACCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341084.7
ENST00000519449.5
CDS-3UTR CCA 90 bp AAAATAATGCTAATCATACATGGACCTTTTGTACTTGGTACAAGTTCTGCACCGCTCCAGCTAGTGCCATaGTGCTGGCCGTTTCACTCA +
Preference number: 4 (lower is better)
Translates to: KIMLIIHGPFVLGTSSAPLQLVP*CWPFHS
Trigger: TGAGTGAAACGGCCAGCACCATGGCACTAGCTGGAG...CGGTGCAGAACTTGTACCAAGTACAAAAGGTCCATGTATGATTAGCATTATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341084.7
ENST00000519449.5
CDS-3UTR CCA 90 bp GCCAACTTCTGCTTATGTCAGCTGAACATTGTCCATAAACAAAAGCAAAAGAAACAGCATGACTTCGGGTaGCACTGCCATCATCCACAC +
Preference number: 4 (lower is better)
Translates to: ANFCLCQLNIVHKQKQKKQHDFG*HCHHPH
Trigger: GTGTGGATGATGGCAGTGCCACCCGAAGTCATGCTG...TTTCTTTTGCTTTTGTTTATGGACAATGTTCAGCTGACATAAGCAGAAGTTGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341084.7
ENST00000519449.5
CDS-3UTR CCA 90 bp AAAATAATGCTAATCATACATGGACCTTTTGTACTTGGTACAAGTTCTGCACCGCTTCAGGCAAGCCACTaGATGAACCGCCAGCATGAC +
Preference number: 4 (lower is better)
Translates to: KIMLIIHGPFVLGTSSAPLQASH*MNRQHD
Trigger: GTCATGCTGGCGGTTCATCCAGTGGCTTGCCTGAAG...CGGTGCAGAACTTGTACCAAGTACAAAAGGTCCATGTATGATTAGCATTATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341084.7
ENST00000519449.5
CDS-3UTR CCA 90 bp GCCAACTTCTGCTTATGTCAGCTGAACATTGTCCATAAACAAAAGCAAAAGAAAGTAGTCCTAGCTACTTaGAAGGCTGAGGTGGCAGGG +
Preference number: 4 (lower is better)
Translates to: ANFCLCQLNIVHKQKQKKVVLAT*KAEVAG
Trigger: CCCTGCCACCTCAGCCTTCCAAGTAGCTAGGACTAC...TTTCTTTTGCTTTTGTTTATGGACAATGTTCAGCTGACATAAGCAGAAGTTGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519449.5
CDS-3UTR TCA 90 bp GCCAACTTCTGCTTATGTCAGCTGAACATTGTCCATAAACAAAAGCAAAAGAAACCTGGTAGGGAAAAGTaGTGGAAGAAGACTGCAGCC +
Preference number: 4 (lower is better)
Translates to: ANFCLCQLNIVHKQKQKKPGREK*WKKTAA
Trigger: GGCTGCAGTCTTCTTCCATCACTTTTCCCTACCAGG...TTTCTTTTGCTTTTGTTTATGGACAATGTTCAGCTGACATAAGCAGAAGTTGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000341084.7
ENST00000519449.5
CDS-3UTR GCA 90 bp TTGTACTTGGTACAAGTTCTGCACCGTGCTTTGATTTCATGGTTGGAGAAGATACCTACAATCAGGATCTaGAACAAGCCACCGTCTAAG +
Preference number: 4 (lower is better)
Translates to: LYLVQVLHRALISWLEKIPTIRI*NKPPSK
Trigger: CTTAGACGGTGGCTTGTTGCAGATCCTGATTGTAGG...TATCTTCTCCAACCATGAAATCAAAGCACGGTGCAGAACTTGTACCAAGTACAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341084.7
ENST00000519449.5
CDS-3UTR GCA 90 bp TTATACAGGAAATTAACAGTACAGGCAGTATTTTGGCCAACTTCTGCTTATGTCCACTTGCACTCAAACTaGCAGTCAGCCCACCAACAC +
Preference number: 4 (lower is better)
Translates to: LYRKLTVQAVFWPTSAYVHLHSN*QSAHQH
Trigger: GTGTTGGTGGGCTGACTGGCAGTTTGAGTGCAAGTG...GACATAAGCAGAAGTTGGCCAAAATACTGCCTGTACTGTTAATTTCCTGTATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341084.7
ENST00000519449.5
CDS-3UTR GCA 90 bp TTGGTAACTAAGATCCACATGACACACAATGCCTTGCTGAACACAGAAAATGTACATGTGGCTTCCACTTaGACTCAAACTGCCAGTCAG +
Preference number: 4 (lower is better)
Translates to: LVTKIHMTHNALLNTENVHVAST*TQTASQ
Trigger: CTGACTGGCAGTTTGAGTGCAAGTGGAAGCCACATG...TACATTTTCTGTGTTCAGCAAGGCATTGTGTGTCATGTGGATCTTAGTTACCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341084.7
ENST00000519449.5
CDS-3UTR GCA 90 bp AAAATAACTGGCACTAGTGTTATAAGCATATTAATGGACCTGGTAGGGAAAAGTGACTTCGGGTGGCACTaGCATCATCCACACTACTGC +
Preference number: 4 (lower is better)
Translates to: KITGTSVISILMDLVGKSDFGWH*HHPHYC
Trigger: GCAGTAGTGTGGATGATGGCAGTGCCACCCGAAGTC...ACTTTTCCCTACCAGGTCCATTAATATGCTTATAACACTAGTGCCAGTTATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341084.7
ENST00000519449.5
CDS-3UTR CCA 90 bp TTATACAGGAAATTAACAGTACAGGCAGTATTTTGGCCAACTTCTGCTTATGTCGCAGCATCACAGGTCTaGTTGGGGTGCCAAATCTGT +
Preference number: 4 (lower is better)
Translates to: LYRKLTVQAVFWPTSAYVAASQV*LGCQIC
Trigger: ACAGATTTGGCACCCCAACCAGACCTGTGATGCTGC...GACATAAGCAGAAGTTGGCCAAAATACTGCCTGTACTGTTAATTTCCTGTATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341084.7
ENST00000519449.5
CDS-3UTR CCA 90 bp ATGGACCTTTTGTACTTGGTACAAGTTCTGCACCGTGCTTTGATTTCATGGTTGTTACACCACCTGCTATaGCCAAATTCCGTTTGTGCT +
Preference number: 4 (lower is better)
Translates to: MDLLYLVQVLHRALISWLLHHLL*PNSVCA
Trigger: AGCACAAACGGAATTTGGCCATAGCAGGTGGTGTAA...CAACCATGAAATCAAAGCACGGTGCAGAACTTGTACCAAGTACAAAAGGTCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341084.7
ENST00000519449.5
CDS-3UTR CCA 90 bp AAAATAACTGGCACTAGTGTTATAAGCATATTAATGGACCTGGTAGGGAAAAGTCAGCATGACTTCGGGTaGCACTGCCATCATCCACAC +
Preference number: 4 (lower is better)
Translates to: KITGTSVISILMDLVGKSQHDFG*HCHHPH
Trigger: GTGTGGATGATGGCAGTGCCACCCGAAGTCATGCTG...ACTTTTCCCTACCAGGTCCATTAATATGCTTATAACACTAGTGCCAGTTATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341084.7
ENST00000519449.5
CDS-3UTR CCA 90 bp ATGGACCTTTTGTACTTGGTACAAGTTCTGCACCGTGCTTTGATTTCATGGTTGGGCACCAAGAATCAATaGGGTACAAACTTCCCCTTA +
Preference number: 4 (lower is better)
Translates to: MDLLYLVQVLHRALISWLGTKNQ*GTNFPL
Trigger: TAAGGGGAAGTTTGTACCCCATTGATTCTTGGTGCC...CAACCATGAAATCAAAGCACGGTGCAGAACTTGTACCAAGTACAAAAGGTCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341084.7
ENST00000519449.5
CDS-3UTR CCA 90 bp ATGGACCTTTTGTACTTGGTACAAGTTCTGCACCGTGCTTTGATTTCATGGTTGTGGACCTTTTGTACTTaGTACAAGTTCTGCACCGTG +
Preference number: 4 (lower is better)
Translates to: MDLLYLVQVLHRALISWLWTFCT*YKFCTV
Trigger: CACGGTGCAGAACTTGTACCAAGTACAAAAGGTCCA...CAACCATGAAATCAAAGCACGGTGCAGAACTTGTACCAAGTACAAAAGGTCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341084.7
ENST00000519449.5
CDS-3UTR TCA 90 bp TTATACAGGAAATTAACAGTACAGGCAGTATTTTGGCCAACTTCTGCTTATGTCAGGCAAGCTCACAGATaGAGCAGAGGACTGAAGATC +
Preference number: 4 (lower is better)
Translates to: LYRKLTVQAVFWPTSAYVRQAHR*SRGLKI
Trigger: GATCTTCAGTCCTCTGCTTCATCTGTGAGCTTGCCT...GACATAAGCAGAAGTTGGCCAAAATACTGCCTGTACTGTTAATTTCCTGTATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341084.7
ENST00000519449.5
CDS-3UTR TCA 90 bp TTGGTAACTAAGATCCACATGACACACAATGCCTTGCTGAACACAGAAAATGTATTTTGGGTGCCTTTTTaGCTGAAGGCAAGCTCACAG +
Preference number: 4 (lower is better)
Translates to: LVTKIHMTHNALLNTENVFWVPF*LKASSQ
Trigger: CTGTGAGCTTGCCTTCAGTCAAAAAGGCACCCAAAA...TACATTTTCTGTGTTCAGCAAGGCATTGTGTGTCATGTGGATCTTAGTTACCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000341084.7
ENST00000519449.5
CDS-3UTR TCA 90 bp TTATACAGGAAATTAACAGTACAGGCAGTATTTTGGCCAACTTCTGCTTATGTCTACCATGGCACTTCCTaGCAGACTCCCCGTTATACT +
Preference number: 4 (lower is better)
Translates to: LYRKLTVQAVFWPTSAYVYHGTS*QTPRYT
Trigger: AGTATAACGGGGAGTCTGTCAGGAAGTGCCATGGTA...GACATAAGCAGAAGTTGGCCAAAATACTGCCTGTACTGTTAATTTCCTGTATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341084.7
ENST00000519449.5
CDS-3UTR TCA 90 bp AAAATAATGCTAATCATACATGGACCTTTTGTACTTGGTACAAGTTCTGCACCGGGAGAATGTGTCCTTTaGCTCTTCCAGCTTCTGGTG +
Preference number: 4 (lower is better)
Translates to: KIMLIIHGPFVLGTSSAPGECVL*LFQLLV
Trigger: CACCAGAAGCTGGAAGAGTCAAAGGACACATTCTCC...CGGTGCAGAACTTGTACCAAGTACAAAAGGTCCATGTATGATTAGCATTATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519449.5
CDS-3UTR GCA 90 bp ATGGACCTTTTGTACTTGGTACAAGTTCTGCACCGTGCTTTGATTTCATGGTTGCGATCTGAACCCATTTaGCGATGTAAACTCATGTCT +
Preference number: 4 (lower is better)
Translates to: MDLLYLVQVLHRALISWLRSEPI*RCKLMS
Trigger: AGACATGAGTTTACATCGGCAAATGGGTTCAGATCG...CAACCATGAAATCAAAGCACGGTGCAGAACTTGTACCAAGTACAAAAGGTCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341084.7
ENST00000519449.5
CDS-3UTR GCA 90 bp GCCAACTTCTGCTTATGTCAGCTGAACATTGTCCATAAACAAAAGCAAAAGAAACACTTCCCTCCCCTATaGTTGGGTTGTGTCTTGCTT +
Preference number: 4 (lower is better)
Translates to: ANFCLCQLNIVHKQKQKKHFPPL*LGCVLL
Trigger: AAGCAAGACACAACCCAAGCATAGGGGAGGGAAGTG...TTTCTTTTGCTTTTGTTTATGGACAATGTTCAGCTGACATAAGCAGAAGTTGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000341084.7
ENST00000519449.5
CDS-3UTR GCA 90 bp ATGGACCTTTTGTACTTGGTACAAGTTCTGCACCGTGCTTTGATTTCATGGTTGGACTCAATATCTACTTaGACCTCCATACTGTTGCCT +
Preference number: 4 (lower is better)
Translates to: MDLLYLVQVLHRALISWLDSIST*TSILLP
Trigger: AGGCAACAGTATGGAGGTGCAAGTAGATATTGAGTC...CAACCATGAAATCAAAGCACGGTGCAGAACTTGTACCAAGTACAAAAGGTCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341084.7
ENST00000519449.5
CDS-3UTR CCA 90 bp TTATACAGGAAATTAACAGTACAGGCAGTATTTTGGCCAACTTCTGCTTATGTCAGCATATCCACAGTCTaGAGCTGGACACCACCTACA +
Preference number: 4 (lower is better)
Translates to: LYRKLTVQAVFWPTSAYVSISTV*SWTPPT
Trigger: TGTAGGTGGTGTCCAGCTCCAGACTGTGGATATGCT...GACATAAGCAGAAGTTGGCCAAAATACTGCCTGTACTGTTAATTTCCTGTATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341084.7
ENST00000519449.5
CDS-3UTR CCA 90 bp TTGGTAACTAAGATCCACATGACACACAATGCCTTGCTGAACACAGAAAATGTACATCACAGGTCTGGTTaGGGTGCCAAATCTGTTTAC +
Preference number: 4 (lower is better)
Translates to: LVTKIHMTHNALLNTENVHHRSG*GAKSVY
Trigger: GTAAACAGATTTGGCACCCCAACCAGACCTGTGATG...TACATTTTCTGTGTTCAGCAAGGCATTGTGTGTCATGTGGATCTTAGTTACCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341084.7
ENST00000519449.5
CDS-3UTR CCA 90 bp AAAATAATGCTAATCATACATGGACCTTTTGTACTTGGTACAAGTTCTGCACCGCTCAAACGTAAGCTCTaGGCTCTCTCTTGTCGAGCA +
Preference number: 4 (lower is better)
Translates to: KIMLIIHGPFVLGTSSAPLKRKL*ALSCRA
Trigger: TGCTCGACAAGAGAGAGCCCAGAGCTTACGTTTGAG...CGGTGCAGAACTTGTACCAAGTACAAAAGGTCCATGTATGATTAGCATTATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341084.7
ENST00000519449.5
CDS-3UTR CCA 90 bp AAAATAACTGGCACTAGTGTTATAAGCATATTAATGGACCTGGTAGGGAAAAGTTCCCTCCCCTATGCTTaGGTTGTGTCTTGCTTCTGC +
Preference number: 4 (lower is better)
Translates to: KITGTSVISILMDLVGKSSLPYA*VVSCFC
Trigger: GCAGAAGCAAGACACAACCCAAGCATAGGGGAGGGA...ACTTTTCCCTACCAGGTCCATTAATATGCTTATAACACTAGTGCCAGTTATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000341084.7
ENST00000519449.5
CDS-3UTR CCA 90 bp AAAATAACTGGCACTAGTGTTATAAGCATATTAATGGACCTGGTAGGGAAAAGTCTAGTGCCATGGTGCTaGCCGTTTCACTCAGGTTGT +
Preference number: 4 (lower is better)
Translates to: KITGTSVISILMDLVGKSLVPWC*PFHSGC
Trigger: ACAACCTGAGTGAAACGGCCAGCACCATGGCACTAG...ACTTTTCCCTACCAGGTCCATTAATATGCTTATAACACTAGTGCCAGTTATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341084.7
ENST00000519449.5
CDS-3UTR CCA 90 bp ATGGACCTTTTGTACTTGGTACAAGTTCTGCACCGTGCTTTGATTTCATGGTTGTGTAGGAATTCAGAATaGATCCTGCCATTGCTTTGG +
Preference number: 4 (lower is better)
Translates to: MDLLYLVQVLHRALISWLCRNSE*ILPLLW
Trigger: CCAAAGCAATGGCAGGATCCATTCTGAATTCCTACA...CAACCATGAAATCAAAGCACGGTGCAGAACTTGTACCAAGTACAAAAGGTCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341084.7
ENST00000519449.5
CDS-3UTR CCA 90 bp ATGGACCTTTTGTACTTGGTACAAGTTCTGCACCGTGCTTTGATTTCATGGTTGGAACAGGAAGCAGTTTaGGTAACCACAGAAATGCTA +
Preference number: 4 (lower is better)
Translates to: MDLLYLVQVLHRALISWLEQEAV*VTTEML
Trigger: TAGCATTTCTGTGGTTACCCAAACTGCTTCCTGTTC...CAACCATGAAATCAAAGCACGGTGCAGAACTTGTACCAAGTACAAAAGGTCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341084.7
ENST00000519449.5
CDS-3UTR CCA 90 bp ATGGACCTTTTGTACTTGGTACAAGTTCTGCACCGTGCTTTGATTTCATGGTTGGTACAGGCAGTATTTTaGCCAACTTCTGCTTATGTC +
Preference number: 4 (lower is better)
Translates to: MDLLYLVQVLHRALISWLVQAVF*PTSAYV
Trigger: GACATAAGCAGAAGTTGGCCAAAATACTGCCTGTAC...CAACCATGAAATCAAAGCACGGTGCAGAACTTGTACCAAGTACAAAAGGTCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341084.7
ENST00000519449.5
CDS-3UTR CCA 90 bp ATGGACCTTTTGTACTTGGTACAAGTTCTGCACCGTGCTTTGATTTCATGGTTGAGAAGACTGCTATCATaGATGTTCTGTAGTCCTAGC +
Preference number: 4 (lower is better)
Translates to: MDLLYLVQVLHRALISWLRRLLS*MFCSPS
Trigger: GCTAGGACTACAGAACATCCATGATAGCAGTCTTCT...CAACCATGAAATCAAAGCACGGTGCAGAACTTGTACCAAGTACAAAAGGTCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519449.5
CDS-3UTR TCA 90 bp TTATACAGGAAATTAACAGTACAGGCAGTATTTTGGCCAACTTCTGCTTATGTCTTTTGGGTGCCTTTTTaGCTGAAGGCAAGCTCACAG +
Preference number: 4 (lower is better)
Translates to: LYRKLTVQAVFWPTSAYVFWVPF*LKASSQ
Trigger: CTGTGAGCTTGCCTTCAGTCAAAAAGGCACCCAAAA...GACATAAGCAGAAGTTGGCCAAAATACTGCCTGTACTGTTAATTTCCTGTATAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000341084.7
ENST00000519449.5
CDS-3UTR TCA 90 bp TTATACAGGAAATTAACAGTACAGGCAGTATTTTGGCCAACTTCTGCTTATGTCAAGGCATACTGTCACTaGGGGATGGAGCCTCAAATT +
Preference number: 4 (lower is better)
Translates to: LYRKLTVQAVFWPTSAYVKAYCH*GMEPQI
Trigger: AATTTGAGGCTCCATCCCTCAGTGACAGTATGCCTT...GACATAAGCAGAAGTTGGCCAAAATACTGCCTGTACTGTTAATTTCCTGTATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341084.7
ENST00000519449.5
CDS-3UTR TCA 90 bp GCCAACTTCTGCTTATGTCAGCTGAACATTGTCCATAAACAAAAGCAAAAGAAAAAGGCATACTGTCACTaGGGGATGGAGCCTCAAATT +
Preference number: 4 (lower is better)
Translates to: ANFCLCQLNIVHKQKQKKKAYCH*GMEPQI
Trigger: AATTTGAGGCTCCATCCCTCAGTGACAGTATGCCTT...TTTCTTTTGCTTTTGTTTATGGACAATGTTCAGCTGACATAAGCAGAAGTTGGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000341084.7
ENST00000519449.5
CDS-3UTR TCA 90 bp TTGTACTTGGTACAAGTTCTGCACCGTGCTTTGATTTCATGGTTGGAGAAGATAACAGAAATGCTACACTaGTGTGGGGAATTTTCCAGA +
Preference number: 4 (lower is better)
Translates to: LYLVQVLHRALISWLEKITEMLH*CGEFSR
Trigger: TCTGGAAAATTCCCCACATCAGTGTAGCATTTCTGT...TATCTTCTCCAACCATGAAATCAAAGCACGGTGCAGAACTTGTACCAAGTACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341084.7
ENST00000519449.5
CDS-3UTR TCA 90 bp TTGTACTTGGTACAAGTTCTGCACCGTGCTTTGATTTCATGGTTGGAGAAGATACACACAATGCCTTGCTaGACACAGAAAATGTATCTG +
Preference number: 4 (lower is better)
Translates to: LYLVQVLHRALISWLEKIHTMPC*TQKMYL
Trigger: CAGATACATTTTCTGTGTTCAGCAAGGCATTGTGTG...TATCTTCTCCAACCATGAAATCAAAGCACGGTGCAGAACTTGTACCAAGTACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341084.7
ENST00000519449.5
CDS-3UTR TCA 90 bp TTGGTAACTAAGATCCACATGACACACAATGCCTTGCTGAACACAGAAAATGTATTCTGCACCGTGCTTTaGTTTCATGGTTGGAGAAGA +
Preference number: 4 (lower is better)
Translates to: LVTKIHMTHNALLNTENVFCTVL*FHGWRR
Trigger: TCTTCTCCAACCATGAAATCAAAGCACGGTGCAGAA...TACATTTTCTGTGTTCAGCAAGGCATTGTGTGTCATGTGGATCTTAGTTACCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341084.7
ENST00000519449.5
CDS-3UTR GCA 90 bp AAAATAATGCTAATCATACATGGACCTTTTGTACTTGGTACAAGTTCTGCACCGAGCGATTGTGAATCTTaGGGCCCACATACACAGGAA +
Preference number: 4 (lower is better)
Translates to: KIMLIIHGPFVLGTSSAPSDCES*GPHTQE
Trigger: TTCCTGTGTATGTGGGCCGCAAGATTCACAATCGCT...CGGTGCAGAACTTGTACCAAGTACAAAAGGTCCATGTATGATTAGCATTATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341084.7
ENST00000519449.5
CDS-3UTR GCA 90 bp TTATACAGGAAATTAACAGTACAGGCAGTATTTTGGCCAACTTCTGCTTATGTCGATACCTACAGTCACTaGAGCTACTACTGGAGACAC +
Preference number: 4 (lower is better)
Translates to: LYRKLTVQAVFWPTSAYVDTYSH*SYYWRH
Trigger: GTGTCTCCAGTAGTAGCTGCAGTGACTGTAGGTATC...GACATAAGCAGAAGTTGGCCAAAATACTGCCTGTACTGTTAATTTCCTGTATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341084.7
ENST00000519449.5
CDS-3UTR GCA 90 bp TTGGTAACTAAGATCCACATGACACACAATGCCTTGCTGAACACAGAAAATGTAAATGGATCCTGCCATTaGTTTGGTGCTGGCATTATC +
Preference number: 4 (lower is better)
Translates to: LVTKIHMTHNALLNTENVNGSCH*FGAGII
Trigger: GATAATGCCAGCACCAAAGCAATGGCAGGATCCATT...TACATTTTCTGTGTTCAGCAAGGCATTGTGTGTCATGTGGATCTTAGTTACCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341084.7
ENST00000519449.5
CDS-3UTR GCA 90 bp TTGTACTTGGTACAAGTTCTGCACCGTGCTTTGATTTCATGGTTGGAGAAGATACCACATGACACACAATaGCTTGCTGAACACAGAAAA +
Preference number: 4 (lower is better)
Translates to: LYLVQVLHRALISWLEKIPHDTQ*LAEHRK
Trigger: TTTTCTGTGTTCAGCAAGGCATTGTGTGTCATGTGG...TATCTTCTCCAACCATGAAATCAAAGCACGGTGCAGAACTTGTACCAAGTACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341084.7
ENST00000519449.5
CDS-3UTR CCA 90 bp TTATACAGGAAATTAACAGTACAGGCAGTATTTTGGCCAACTTCTGCTTATGTCCATCACAGGTCTGGTTaGGGTGCCAAATCTGTTTAC +
Preference number: 4 (lower is better)
Translates to: LYRKLTVQAVFWPTSAYVHHRSG*GAKSVY
Trigger: GTAAACAGATTTGGCACCCCAACCAGACCTGTGATG...GACATAAGCAGAAGTTGGCCAAAATACTGCCTGTACTGTTAATTTCCTGTATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341084.7
ENST00000519449.5
CDS-3UTR CCA 90 bp AAAATAACTGGCACTAGTGTTATAAGCATATTAATGGACCTGGTAGGGAAAAGTCTCAAACGTAAGCTCTaGGCTCTCTCTTGTCGAGCA +
Preference number: 4 (lower is better)
Translates to: KITGTSVISILMDLVGKSLKRKL*ALSCRA
Trigger: TGCTCGACAAGAGAGAGCCCAGAGCTTACGTTTGAG...ACTTTTCCCTACCAGGTCCATTAATATGCTTATAACACTAGTGCCAGTTATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341084.7
ENST00000519449.5
CDS-3UTR CCA 90 bp TTGGTAACTAAGATCCACATGACACACAATGCCTTGCTGAACACAGAAAATGTAAGCACATCGTGGACATaGCTTTATATCATCAGCTGC +
Preference number: 4 (lower is better)
Translates to: LVTKIHMTHNALLNTENVSTSWT*LYIISC
Trigger: GCAGCTGATGATATAAAGCCATGTCCACGATGTGCT...TACATTTTCTGTGTTCAGCAAGGCATTGTGTGTCATGTGGATCTTAGTTACCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341084.7
ENST00000519449.5
CDS-3UTR CCA 90 bp TTATACAGGAAATTAACAGTACAGGCAGTATTTTGGCCAACTTCTGCTTATGTCTCAGGTTGTCTCGGATaGCTCCTATTCGATCCATGT +
Preference number: 4 (lower is better)
Translates to: LYRKLTVQAVFWPTSAYVSGCLG*LLFDPC
Trigger: ACATGGATCGAATAGGAGCCATCCGAGACAACCTGA...GACATAAGCAGAAGTTGGCCAAAATACTGCCTGTACTGTTAATTTCCTGTATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341084.7
ENST00000519449.5
CDS-3UTR CCA 90 bp AAAATAATGCTAATCATACATGGACCTTTTGTACTTGGTACAAGTTCTGCACCGTCAGGTTGTCTCGGATaGCTCCTATTCGATCCATGT +
Preference number: 4 (lower is better)
Translates to: KIMLIIHGPFVLGTSSAPSGCLG*LLFDPC
Trigger: ACATGGATCGAATAGGAGCCATCCGAGACAACCTGA...CGGTGCAGAACTTGTACCAAGTACAAAAGGTCCATGTATGATTAGCATTATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341084.7
ENST00000519449.5
CDS-3UTR CCA 90 bp TTGTACTTGGTACAAGTTCTGCACCGTGCTTTGATTTCATGGTTGGAGAAGATAGGGTGTGATAATCACTaGAACCATGACTACAAGAAG +
Preference number: 4 (lower is better)
Translates to: LYLVQVLHRALISWLEKIGCDNH*NHDYKK
Trigger: CTTCTTGTAGTCATGGTTCCAGTGATTATCACACCC...TATCTTCTCCAACCATGAAATCAAAGCACGGTGCAGAACTTGTACCAAGTACAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341084.7
ENST00000519449.5
CDS-3UTR CCA 90 bp TTGGTAACTAAGATCCACATGACACACAATGCCTTGCTGAACACAGAAAATGTAAATGCTACACTGATGTaGGGAATTTTCCAGACGGTC +
Preference number: 4 (lower is better)
Translates to: LVTKIHMTHNALLNTENVNATLM*GIFQTV
Trigger: GACCGTCTGGAAAATTCCCCACATCAGTGTAGCATT...TACATTTTCTGTGTTCAGCAAGGCATTGTGTGTCATGTGGATCTTAGTTACCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341084.7
ENST00000519449.5
CDS-3UTR CCA 90 bp TTGGTAACTAAGATCCACATGACACACAATGCCTTGCTGAACACAGAAAATGTAGGCACCAAGAATCAATaGGGTACAAACTTCCCCTTA +
Preference number: 4 (lower is better)
Translates to: LVTKIHMTHNALLNTENVGTKNQ*GTNFPL
Trigger: TAAGGGGAAGTTTGTACCCCATTGATTCTTGGTGCC...TACATTTTCTGTGTTCAGCAAGGCATTGTGTGTCATGTGGATCTTAGTTACCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341084.7
ENST00000519449.5
CDS-3UTR CCA 90 bp ATGGACCTTTTGTACTTGGTACAAGTTCTGCACCGTGCTTTGATTTCATGGTTGCGTGCTTTGATTTCATaGTTGGAGAAGATATGCATG +
Preference number: 4 (lower is better)
Translates to: MDLLYLVQVLHRALISWLRALIS*LEKICM
Trigger: CATGCATATCTTCTCCAACCATGAAATCAAAGCACG...CAACCATGAAATCAAAGCACGGTGCAGAACTTGTACCAAGTACAAAAGGTCCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341084.7
ENST00000519449.5
CDS-3UTR TCA 90 bp TTGGTAACTAAGATCCACATGACACACAATGCCTTGCTGAACACAGAAAATGTAAGCCTCAAATTCACTTaGGTTCGTGCTTTGTTGTTC +
Preference number: 4 (lower is better)
Translates to: LVTKIHMTHNALLNTENVSLKFT*VRALLF
Trigger: GAACAACAAAGCACGAACTCAAGTGAATTTGAGGCT...TACATTTTCTGTGTTCAGCAAGGCATTGTGTGTCATGTGGATCTTAGTTACCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341084.7
ENST00000519449.5
CDS-3UTR TCA 90 bp TTGGTAACTAAGATCCACATGACACACAATGCCTTGCTGAACACAGAAAATGTAACAGAAATGCTACACTaGTGTGGGGAATTTTCCAGA +
Preference number: 4 (lower is better)
Translates to: LVTKIHMTHNALLNTENVTEMLH*CGEFSR
Trigger: TCTGGAAAATTCCCCACATCAGTGTAGCATTTCTGT...TACATTTTCTGTGTTCAGCAAGGCATTGTGTGTCATGTGGATCTTAGTTACCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000341084.7
ENST00000519449.5
CDS-3UTR TCA 90 bp ATGGACCTTTTGTACTTGGTACAAGTTCTGCACCGTGCTTTGATTTCATGGTTGCCAAATGGTAGCAAATaGGCTGCATTAAGCTTTATA +
Preference number: 4 (lower is better)
Translates to: MDLLYLVQVLHRALISWLPNGSK*AALSFI
Trigger: TATAAAGCTTAATGCAGCTCATTTGCTACCATTTGG...CAACCATGAAATCAAAGCACGGTGCAGAACTTGTACCAAGTACAAAAGGTCCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341084.7
ENST00000519449.5
CDS-3UTR GCA 90 bp TTATACAGGAAATTAACAGTACAGGCAGTATTTTGGCCAACTTCTGCTTATGTCGCTGGCACATCCAAATaGTATCACAGCATATCCACA +
Preference number: 4 (lower is better)
Translates to: LYRKLTVQAVFWPTSAYVAGTSK*YHSIST
Trigger: TGTGGATATGCTGTGATAGCATTTGGATGTGCCAGC...GACATAAGCAGAAGTTGGCCAAAATACTGCCTGTACTGTTAATTTCCTGTATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341084.7
ENST00000519449.5
CDS-3UTR GCA 90 bp GCCAACTTCTGCTTATGTCAGCTGAACATTGTCCATAAACAAAAGCAAAAGAAAGCTGGCACATCCAAATaGTATCACAGCATATCCACA +
Preference number: 4 (lower is better)
Translates to: ANFCLCQLNIVHKQKQKKAGTSK*YHSIST
Trigger: TGTGGATATGCTGTGATAGCATTTGGATGTGCCAGC...TTTCTTTTGCTTTTGTTTATGGACAATGTTCAGCTGACATAAGCAGAAGTTGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341084.7
ENST00000519449.5
CDS-3UTR GCA 90 bp ATGGACCTTTTGTACTTGGTACAAGTTCTGCACCGTGCTTTGATTTCATGGTTGACCAGTGTTCCCAGTTaGCACAATATTTTCTTCTTT +
Preference number: 4 (lower is better)
Translates to: MDLLYLVQVLHRALISWLTSVPS*HNIFFF
Trigger: AAAGAAGAAAATATTGTGGCAACTGGGAACACTGGT...CAACCATGAAATCAAAGCACGGTGCAGAACTTGTACCAAGTACAAAAGGTCCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341084.7
ENST00000519449.5
CDS-3UTR GCA 90 bp AAAATAACTGGCACTAGTGTTATAAGCATATTAATGGACCTGGTAGGGAAAAGTAGCGATTGTGAATCTTaGGGCCCACATACACAGGAA +
Preference number: 4 (lower is better)
Translates to: KITGTSVISILMDLVGKSSDCES*GPHTQE
Trigger: TTCCTGTGTATGTGGGCCGCAAGATTCACAATCGCT...ACTTTTCCCTACCAGGTCCATTAATATGCTTATAACACTAGTGCCAGTTATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341084.7
ENST00000519449.5
CDS-3UTR GCA 90 bp TTGTACTTGGTACAAGTTCTGCACCGTGCTTTGATTTCATGGTTGGAGAAGATAGCTTTGAAACATCCTTaGCTTCATAGCGATTGTGAA +
Preference number: 4 (lower is better)
Translates to: LYLVQVLHRALISWLEKIALKHP*LHSDCE
Trigger: TTCACAATCGCTATGAAGGCAAGGATGTTTCAAAGC...TATCTTCTCCAACCATGAAATCAAAGCACGGTGCAGAACTTGTACCAAGTACAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341084.7
ENST00000519449.5
CDS-3UTR GCA 90 bp GCCAACTTCTGCTTATGTCAGCTGAACATTGTCCATAAACAAAAGCAAAAGAAACAACGTTACACCACCTaGTATGGCCAAATTCCGTTT +
Preference number: 4 (lower is better)
Translates to: ANFCLCQLNIVHKQKQKKQRYTT*YGQIPF
Trigger: AAACGGAATTTGGCCATAGCAGGTGGTGTAACGTTG...TTTCTTTTGCTTTTGTTTATGGACAATGTTCAGCTGACATAAGCAGAAGTTGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341084.7
ENST00000519449.5
CDS-3UTR GCA 90 bp AAAATAACTGGCACTAGTGTTATAAGCATATTAATGGACCTGGTAGGGAAAAGTGATACCTACAGTCACTaGAGCTACTACTGGAGACAC +
Preference number: 4 (lower is better)
Translates to: KITGTSVISILMDLVGKSDTYSH*SYYWRH
Trigger: GTGTCTCCAGTAGTAGCTGCAGTGACTGTAGGTATC...ACTTTTCCCTACCAGGTCCATTAATATGCTTATAACACTAGTGCCAGTTATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341084.7
ENST00000519449.5
CDS-3UTR GCA 90 bp AAAATAATGCTAATCATACATGGACCTTTTGTACTTGGTACAAGTTCTGCACCGAATGGATCCTGCCATTaGTTTGGTGCTGGCATTATC +
Preference number: 4 (lower is better)
Translates to: KIMLIIHGPFVLGTSSAPNGSCH*FGAGII
Trigger: GATAATGCCAGCACCAAAGCAATGGCAGGATCCATT...CGGTGCAGAACTTGTACCAAGTACAAAAGGTCCATGTATGATTAGCATTATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341084.7
ENST00000519449.5
CDS-3UTR GCA 90 bp TTGGTAACTAAGATCCACATGACACACAATGCCTTGCTGAACACAGAAAATGTAACAAGTTCTGCACCGTaGTTTGATTTCATGGTTGGA +
Preference number: 4 (lower is better)
Translates to: LVTKIHMTHNALLNTENVTSSAP*FDFMVG
Trigger: TCCAACCATGAAATCAAAGCACGGTGCAGAACTTGT...TACATTTTCTGTGTTCAGCAAGGCATTGTGTGTCATGTGGATCTTAGTTACCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341084.7
ENST00000519449.5
CDS-3UTR CCA 90 bp AAAATAATGCTAATCATACATGGACCTTTTGTACTTGGTACAAGTTCTGCACCGAGCACATCGTGGACATaGCTTTATATCATCAGCTGC +
Preference number: 4 (lower is better)
Translates to: KIMLIIHGPFVLGTSSAPSTSWT*LYIISC
Trigger: GCAGCTGATGATATAAAGCCATGTCCACGATGTGCT...CGGTGCAGAACTTGTACCAAGTACAAAAGGTCCATGTATGATTAGCATTATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341084.7
ENST00000519449.5
CDS-3UTR CCA 90 bp GCCAACTTCTGCTTATGTCAGCTGAACATTGTCCATAAACAAAAGCAAAAGAAATTACACCACCTGCTATaGCCAAATTCCGTTTGTGCT +
Preference number: 4 (lower is better)
Translates to: ANFCLCQLNIVHKQKQKKLHHLL*PNSVCA
Trigger: AGCACAAACGGAATTTGGCCATAGCAGGTGGTGTAA...TTTCTTTTGCTTTTGTTTATGGACAATGTTCAGCTGACATAAGCAGAAGTTGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341084.7
ENST00000519449.5
CDS-3UTR CCA 90 bp AAAATAATGCTAATCATACATGGACCTTTTGTACTTGGTACAAGTTCTGCACCGCACTGCAGCTACTACTaGAGACACGATTACAGACAA +
Preference number: 4 (lower is better)
Translates to: KIMLIIHGPFVLGTSSAPHCSYY*RHDYRQ
Trigger: TTGTCTGTAATCGTGTCTCCAGTAGTAGCTGCAGTG...CGGTGCAGAACTTGTACCAAGTACAAAAGGTCCATGTATGATTAGCATTATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341084.7
ENST00000519449.5
CDS-3UTR CCA 90 bp GCCAACTTCTGCTTATGTCAGCTGAACATTGTCCATAAACAAAAGCAAAAGAAACCTATTCGATCCATGTaGCTTCCACTTGCACTCAAA +
Preference number: 4 (lower is better)
Translates to: ANFCLCQLNIVHKQKQKKPIRSM*LPLALK
Trigger: TTTGAGTGCAAGTGGAAGCCACATGGATCGAATAGG...TTTCTTTTGCTTTTGTTTATGGACAATGTTCAGCTGACATAAGCAGAAGTTGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341084.7
ENST00000519449.5
CDS-3UTR CCA 90 bp TTATACAGGAAATTAACAGTACAGGCAGTATTTTGGCCAACTTCTGCTTATGTCCCTATTCGATCCATGTaGCTTCCACTTGCACTCAAA +
Preference number: 4 (lower is better)
Translates to: LYRKLTVQAVFWPTSAYVPIRSM*LPLALK
Trigger: TTTGAGTGCAAGTGGAAGCCACATGGATCGAATAGG...GACATAAGCAGAAGTTGGCCAAAATACTGCCTGTACTGTTAATTTCCTGTATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341084.7
ENST00000519449.5
CDS-3UTR CCA 90 bp TTATACAGGAAATTAACAGTACAGGCAGTATTTTGGCCAACTTCTGCTTATGTCAATGCTACACTGATGTaGGGAATTTTCCAGACGGTC +
Preference number: 4 (lower is better)
Translates to: LYRKLTVQAVFWPTSAYVNATLM*GIFQTV
Trigger: GACCGTCTGGAAAATTCCCCACATCAGTGTAGCATT...GACATAAGCAGAAGTTGGCCAAAATACTGCCTGTACTGTTAATTTCCTGTATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341084.7
ENST00000519449.5
CDS-3UTR TCA 90 bp GCCAACTTCTGCTTATGTCAGCTGAACATTGTCCATAAACAAAAGCAAAAGAAAACAAAGGGCACTCTATaGAGTCTCCAATTTGTTTGC +
Preference number: 4 (lower is better)
Translates to: ANFCLCQLNIVHKQKQKKTKGTL*SLQFVC
Trigger: GCAAACAAATTGGAGACTTCATAGAGTGCCCTTTGT...TTTCTTTTGCTTTTGTTTATGGACAATGTTCAGCTGACATAAGCAGAAGTTGGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000341084.7
ENST00000519449.5
CDS-3UTR TCA 90 bp AAAATAACTGGCACTAGTGTTATAAGCATATTAATGGACCTGGTAGGGAAAAGTTCTTGCTTCTGCTACTaGTGTTGTGTCTACAGCTGT +
Preference number: 4 (lower is better)
Translates to: KITGTSVISILMDLVGKSSCFCY*CCVYSC
Trigger: ACAGCTGTAGACACAACATCAGTAGCAGAAGCAAGA...ACTTTTCCCTACCAGGTCCATTAATATGCTTATAACACTAGTGCCAGTTATTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341084.7
ENST00000519449.5
CDS-3UTR TCA 90 bp AAAATAACTGGCACTAGTGTTATAAGCATATTAATGGACCTGGTAGGGAAAAGTTTCTGCACCGTGCTTTaGTTTCATGGTTGGAGAAGA +
Preference number: 4 (lower is better)
Translates to: KITGTSVISILMDLVGKSFCTVL*FHGWRR
Trigger: TCTTCTCCAACCATGAAATCAAAGCACGGTGCAGAA...ACTTTTCCCTACCAGGTCCATTAATATGCTTATAACACTAGTGCCAGTTATTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341084.7
ENST00000519449.5
CDS-3UTR GCA 90 bp GCCAACTTCTGCTTATGTCAGCTGAACATTGTCCATAAACAAAAGCAAAAGAAATATACTTTCAATACTTaGAATTCCATCCACCCCGCC +
Preference number: 4 (lower is better)
Translates to: ANFCLCQLNIVHKQKQKKYTFNT*NSIHPA
Trigger: GGCGGGGTGGATGGAATTGCAAGTATTGAAAGTATA...TTTCTTTTGCTTTTGTTTATGGACAATGTTCAGCTGACATAAGCAGAAGTTGGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000341084.7
ENST00000519449.5
CDS-3UTR GCA 90 bp AAAATAATGCTAATCATACATGGACCTTTTGTACTTGGTACAAGTTCTGCACCGTATACTTTCAATACTTaGAATTCCATCCACCCCGCC +
Preference number: 4 (lower is better)
Translates to: KIMLIIHGPFVLGTSSAPYTFNT*NSIHPA
Trigger: GGCGGGGTGGATGGAATTGCAAGTATTGAAAGTATA...CGGTGCAGAACTTGTACCAAGTACAAAAGGTCCATGTATGATTAGCATTATTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000341084.7
ENST00000519449.5
CDS-3UTR GCA 90 bp AAAATAATGCTAATCATACATGGACCTTTTGTACTTGGTACAAGTTCTGCACCGGCCAAATTCCGTTTGTaGTTTGAAACATCCTTGCCT +
Preference number: 4 (lower is better)
Translates to: KIMLIIHGPFVLGTSSAPAKFRL*FETSLP
Trigger: AGGCAAGGATGTTTCAAAGCACAAACGGAATTTGGC...CGGTGCAGAACTTGTACCAAGTACAAAAGGTCCATGTATGATTAGCATTATTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341084.7
ENST00000519449.5
CDS-3UTR GCA 90 bp TTATACAGGAAATTAACAGTACAGGCAGTATTTTGGCCAACTTCTGCTTATGTCGCCAAATTCCGTTTGTaGTTTGAAACATCCTTGCCT +
Preference number: 4 (lower is better)
Translates to: LYRKLTVQAVFWPTSAYVAKFRL*FETSLP
Trigger: AGGCAAGGATGTTTCAAAGCACAAACGGAATTTGGC...GACATAAGCAGAAGTTGGCCAAAATACTGCCTGTACTGTTAATTTCCTGTATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341084.7
ENST00000519449.5
CDS-3UTR GCA 90 bp AAAATAACTGGCACTAGTGTTATAAGCATATTAATGGACCTGGTAGGGAAAAGTCAACGTTACACCACCTaGTATGGCCAAATTCCGTTT +
Preference number: 4 (lower is better)
Translates to: KITGTSVISILMDLVGKSQRYTT*YGQIPF
Trigger: AAACGGAATTTGGCCATAGCAGGTGGTGTAACGTTG...ACTTTTCCCTACCAGGTCCATTAATATGCTTATAACACTAGTGCCAGTTATTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341084.7
ENST00000519449.5
CDS-3UTR GCA 90 bp TTGTACTTGGTACAAGTTCTGCACCGTGCTTTGATTTCATGGTTGGAGAAGATATTCTTTCTGTACATCTaGTTGTACTTCCAACCTGTT +
Preference number: 4 (lower is better)
Translates to: LYLVQVLHRALISWLEKIFFLYI*LYFQPV
Trigger: AACAGGTTGGAAGTACAAGCAGATGTACAGAAAGAA...TATCTTCTCCAACCATGAAATCAAAGCACGGTGCAGAACTTGTACCAAGTACAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341084.7
ENST00000519449.5
CDS-3UTR GCA 90 bp AAAATAATGCTAATCATACATGGACCTTTTGTACTTGGTACAAGTTCTGCACCGGACTCAATATCTACTTaGACCTCCATACTGTTGCCT +
Preference number: 4 (lower is better)
Translates to: KIMLIIHGPFVLGTSSAPDSIST*TSILLP
Trigger: AGGCAACAGTATGGAGGTGCAAGTAGATATTGAGTC...CGGTGCAGAACTTGTACCAAGTACAAAAGGTCCATGTATGATTAGCATTATTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341084.7
ENST00000519449.5
CDS-3UTR GCA 90 bp AAAATAATGCTAATCATACATGGACCTTTTGTACTTGGTACAAGTTCTGCACCGACTAGAGTGAGAATCTaGTACAGAAGGCATACTGTC +
Preference number: 4 (lower is better)
Translates to: KIMLIIHGPFVLGTSSAPTRVRI*YRRHTV
Trigger: GACAGTATGCCTTCTGTAGCAGATTCTCACTCTAGT...CGGTGCAGAACTTGTACCAAGTACAAAAGGTCCATGTATGATTAGCATTATTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341084.7
ENST00000519449.5
CDS-3UTR GCA 90 bp AAAATAATGCTAATCATACATGGACCTTTTGTACTTGGTACAAGTTCTGCACCGACAAGTTCTGCACCGTaGTTTGATTTCATGGTTGGA +
Preference number: 4 (lower is better)
Translates to: KIMLIIHGPFVLGTSSAPTSSAP*FDFMVG
Trigger: TCCAACCATGAAATCAAAGCACGGTGCAGAACTTGT...CGGTGCAGAACTTGTACCAAGTACAAAAGGTCCATGTATGATTAGCATTATTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341084.7
ENST00000519449.5
CDS-3UTR CCA 90 bp GCCAACTTCTGCTTATGTCAGCTGAACATTGTCCATAAACAAAAGCAAAAGAAATGTAGGAATTCAGAATaGATCCTGCCATTGCTTTGG +
Preference number: 4 (lower is better)
Translates to: ANFCLCQLNIVHKQKQKKCRNSE*ILPLLW
Trigger: CCAAAGCAATGGCAGGATCCATTCTGAATTCCTACA...TTTCTTTTGCTTTTGTTTATGGACAATGTTCAGCTGACATAAGCAGAAGTTGGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341084.7
ENST00000519449.5
CDS-3UTR CCA 90 bp TTGGTAACTAAGATCCACATGACACACAATGCCTTGCTGAACACAGAAAATGTAGCCTTCTTTGTCCAATaGGATGTAGGAATTCAGAAT +
Preference number: 4 (lower is better)
Translates to: LVTKIHMTHNALLNTENVAFFVQ*DVGIQN
Trigger: ATTCTGAATTCCTACATCCCATTGGACAAAGAAGGC...TACATTTTCTGTGTTCAGCAAGGCATTGTGTGTCATGTGGATCTTAGTTACCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341084.7
ENST00000519449.5
CDS-3UTR CCA 90 bp GCCAACTTCTGCTTATGTCAGCTGAACATTGTCCATAAACAAAAGCAAAAGAAAGAACAGGAAGCAGTTTaGGTAACCACAGAAATGCTA +
Preference number: 4 (lower is better)
Translates to: ANFCLCQLNIVHKQKQKKEQEAV*VTTEML
Trigger: TAGCATTTCTGTGGTTACCCAAACTGCTTCCTGTTC...TTTCTTTTGCTTTTGTTTATGGACAATGTTCAGCTGACATAAGCAGAAGTTGGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341084.7
ENST00000519449.5
CDS-3UTR CCA 90 bp AAAATAACTGGCACTAGTGTTATAAGCATATTAATGGACCTGGTAGGGAAAAGTTGGACCTTTTGTACTTaGTACAAGTTCTGCACCGTG +
Preference number: 4 (lower is better)
Translates to: KITGTSVISILMDLVGKSWTFCT*YKFCTV
Trigger: CACGGTGCAGAACTTGTACCAAGTACAAAAGGTCCA...ACTTTTCCCTACCAGGTCCATTAATATGCTTATAACACTAGTGCCAGTTATTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000341084.7
ENST00000519449.5
CDS-3UTR TCA 90 bp TTATACAGGAAATTAACAGTACAGGCAGTATTTTGGCCAACTTCTGCTTATGTCATTCCGTTTGTGCTTTaGAACATCCTTGCCTTCATA +
Preference number: 4 (lower is better)
Translates to: LYRKLTVQAVFWPTSAYVIPFVL*NILAFI
Trigger: TATGAAGGCAAGGATGTTTCAAAGCACAAACGGAAT...GACATAAGCAGAAGTTGGCCAAAATACTGCCTGTACTGTTAATTTCCTGTATAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341084.7
ENST00000519449.5
CDS-3UTR TCA 90 bp TTATACAGGAAATTAACAGTACAGGCAGTATTTTGGCCAACTTCTGCTTATGTCGAATTTGGATGGCTTTaGCTCAATATCTACTTGCAC +
Preference number: 4 (lower is better)
Translates to: LYRKLTVQAVFWPTSAYVEFGWL*LNIYLH
Trigger: GTGCAAGTAGATATTGAGTCAAAGCCATCCAAATTC...GACATAAGCAGAAGTTGGCCAAAATACTGCCTGTACTGTTAATTTCCTGTATAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341084.7
ENST00000519449.5
CDS-3UTR TCA 90 bp AAAATAACTGGCACTAGTGTTATAAGCATATTAATGGACCTGGTAGGGAAAAGTAGCCTCAAATTCACTTaGGTTCGTGCTTTGTTGTTC +
Preference number: 4 (lower is better)
Translates to: KITGTSVISILMDLVGKSSLKFT*VRALLF
Trigger: GAACAACAAAGCACGAACTCAAGTGAATTTGAGGCT...ACTTTTCCCTACCAGGTCCATTAATATGCTTATAACACTAGTGCCAGTTATTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341084.7
ENST00000519449.5
CDS-3UTR TCA 90 bp TTATACAGGAAATTAACAGTACAGGCAGTATTTTGGCCAACTTCTGCTTATGTCCTTTTGCTGGTAACCTaGAACTTAAGTAGTCACATG +
Preference number: 4 (lower is better)
Translates to: LYRKLTVQAVFWPTSAYVLLLVT*NLSSHM
Trigger: CATGTGACTACTTAAGTTTCAGGTTACCAGCAAAAG...GACATAAGCAGAAGTTGGCCAAAATACTGCCTGTACTGTTAATTTCCTGTATAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341084.7
ENST00000519449.5
CDS-3UTR TCA 90 bp TTGGTAACTAAGATCCACATGACACACAATGCCTTGCTGAACACAGAAAATGTACCAAATGGTAGCAAATaGGCTGCATTAAGCTTTATA +
Preference number: 4 (lower is better)
Translates to: LVTKIHMTHNALLNTENVPNGSK*AALSFI
Trigger: TATAAAGCTTAATGCAGCTCATTTGCTACCATTTGG...TACATTTTCTGTGTTCAGCAAGGCATTGTGTGTCATGTGGATCTTAGTTACCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341084.7
ENST00000519449.5
CDS-3UTR TCA 90 bp TTGGTAACTAAGATCCACATGACACACAATGCCTTGCTGAACACAGAAAATGTATCTGCTTATGTCAGCTaGACATTGTCCATAAACAAA +
Preference number: 4 (lower is better)
Translates to: LVTKIHMTHNALLNTENVSAYVS*TLSINK
Trigger: TTTGTTTATGGACAATGTTCAGCTGACATAAGCAGA...TACATTTTCTGTGTTCAGCAAGGCATTGTGTGTCATGTGGATCTTAGTTACCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341084.7
ENST00000519449.5
CDS-3UTR GCA 90 bp AAAATAACTGGCACTAGTGTTATAAGCATATTAATGGACCTGGTAGGGAAAAGTCGATCTGAACCCATTTaGCGATGTAAACTCATGTCT +
Preference number: 4 (lower is better)
Translates to: KITGTSVISILMDLVGKSRSEPI*RCKLMS
Trigger: AGACATGAGTTTACATCGGCAAATGGGTTCAGATCG...ACTTTTCCCTACCAGGTCCATTAATATGCTTATAACACTAGTGCCAGTTATTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341084.7
ENST00000519449.5
CDS-3UTR GCA 90 bp GCCAACTTCTGCTTATGTCAGCTGAACATTGTCCATAAACAAAAGCAAAAGAAATATATCATCAGCTGCTaGTCCAGACTCTTGACTATA +
Preference number: 4 (lower is better)
Translates to: ANFCLCQLNIVHKQKQKKYIISC*SRLLTI
Trigger: TATAGTCAAGAGTCTGGAGCAGCAGCTGATGATATA...TTTCTTTTGCTTTTGTTTATGGACAATGTTCAGCTGACATAAGCAGAAGTTGGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341084.7
ENST00000519449.5
CDS-3UTR GCA 90 bp AAAATAATGCTAATCATACATGGACCTTTTGTACTTGGTACAAGTTCTGCACCGTATATCATCAGCTGCTaGTCCAGACTCTTGACTATA +
Preference number: 4 (lower is better)
Translates to: KIMLIIHGPFVLGTSSAPYIISC*SRLLTI
Trigger: TATAGTCAAGAGTCTGGAGCAGCAGCTGATGATATA...CGGTGCAGAACTTGTACCAAGTACAAAAGGTCCATGTATGATTAGCATTATTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341084.7
ENST00000519449.5
CDS-3UTR GCA 90 bp GCCAACTTCTGCTTATGTCAGCTGAACATTGTCCATAAACAAAAGCAAAAGAAAGCTTTGAAACATCCTTaGCTTCATAGCGATTGTGAA +
Preference number: 4 (lower is better)
Translates to: ANFCLCQLNIVHKQKQKKALKHP*LHSDCE
Trigger: TTCACAATCGCTATGAAGGCAAGGATGTTTCAAAGC...TTTCTTTTGCTTTTGTTTATGGACAATGTTCAGCTGACATAAGCAGAAGTTGGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341084.7
ENST00000519449.5
CDS-3UTR GCA 90 bp AAAATAACTGGCACTAGTGTTATAAGCATATTAATGGACCTGGTAGGGAAAAGTACTAGAGTGAGAATCTaGTACAGAAGGCATACTGTC +
Preference number: 4 (lower is better)
Translates to: KITGTSVISILMDLVGKSTRVRI*YRRHTV
Trigger: GACAGTATGCCTTCTGTAGCAGATTCTCACTCTAGT...ACTTTTCCCTACCAGGTCCATTAATATGCTTATAACACTAGTGCCAGTTATTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341084.7
ENST00000519449.5
CDS-3UTR CCA 90 bp TTGGTAACTAAGATCCACATGACACACAATGCCTTGCTGAACACAGAAAATGTAATCAAGCGAATATCATaGGGATTAAACCGTTCAGTA +
Preference number: 4 (lower is better)
Translates to: LVTKIHMTHNALLNTENVIKRIS*GLNRSV
Trigger: TACTGAACGGTTTAATCCCCATGATATTCGCTTGAT...TACATTTTCTGTGTTCAGCAAGGCATTGTGTGTCATGTGGATCTTAGTTACCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341084.7
ENST00000519449.5
CDS-3UTR CCA 90 bp TTGGTAACTAAGATCCACATGACACACAATGCCTTGCTGAACACAGAAAATGTATTAATTTTGGACAGCTaGCACATCCAAATGCTATCA +
Preference number: 4 (lower is better)
Translates to: LVTKIHMTHNALLNTENVLILDS*HIQMLS
Trigger: TGATAGCATTTGGATGTGCCAGCTGTCCAAAATTAA...TACATTTTCTGTGTTCAGCAAGGCATTGTGTGTCATGTGGATCTTAGTTACCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341084.7
ENST00000519449.5
CDS-3UTR CCA 90 bp AAAATAATGCTAATCATACATGGACCTTTTGTACTTGGTACAAGTTCTGCACCGGCCTTCTTTGTCCAATaGGATGTAGGAATTCAGAAT +
Preference number: 4 (lower is better)
Translates to: KIMLIIHGPFVLGTSSAPAFFVQ*DVGIQN
Trigger: ATTCTGAATTCCTACATCCCATTGGACAAAGAAGGC...CGGTGCAGAACTTGTACCAAGTACAAAAGGTCCATGTATGATTAGCATTATTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341084.7
ENST00000519449.5
CDS-3UTR CCA 90 bp AAAATAACTGGCACTAGTGTTATAAGCATATTAATGGACCTGGTAGGGAAAAGTGGGTGTGATAATCACTaGAACCATGACTACAAGAAG +
Preference number: 4 (lower is better)
Translates to: KITGTSVISILMDLVGKSGCDNH*NHDYKK
Trigger: CTTCTTGTAGTCATGGTTCCAGTGATTATCACACCC...ACTTTTCCCTACCAGGTCCATTAATATGCTTATAACACTAGTGCCAGTTATTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341084.7
ENST00000519449.5
CDS-3UTR CCA 90 bp TTGGTAACTAAGATCCACATGACACACAATGCCTTGCTGAACACAGAAAATGTATCAAGCAATGTTTTGTaGCAAACACACAAAACATGC +
Preference number: 4 (lower is better)
Translates to: LVTKIHMTHNALLNTENVSSNVL*QTHKTC
Trigger: GCATGTTTTGTGTGTTTGCCACAAAACATTGCTTGA...TACATTTTCTGTGTTCAGCAAGGCATTGTGTGTCATGTGGATCTTAGTTACCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000341084.7
ENST00000519449.5
CDS-3UTR CCA 90 bp AAAATAATGCTAATCATACATGGACCTTTTGTACTTGGTACAAGTTCTGCACCGCGTGCTTTGATTTCATaGTTGGAGAAGATATGCATG +
Preference number: 4 (lower is better)
Translates to: KIMLIIHGPFVLGTSSAPRALIS*LEKICM
Trigger: CATGCATATCTTCTCCAACCATGAAATCAAAGCACG...CGGTGCAGAACTTGTACCAAGTACAAAAGGTCCATGTATGATTAGCATTATTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341084.7
ENST00000519449.5
CDS-3UTR CCA 90 bp AAAATAACTGGCACTAGTGTTATAAGCATATTAATGGACCTGGTAGGGAAAAGTGTACAGGCAGTATTTTaGCCAACTTCTGCTTATGTC +
Preference number: 4 (lower is better)
Translates to: KITGTSVISILMDLVGKSVQAVF*PTSAYV
Trigger: GACATAAGCAGAAGTTGGCCAAAATACTGCCTGTAC...ACTTTTCCCTACCAGGTCCATTAATATGCTTATAACACTAGTGCCAGTTATTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000341084.7
ENST00000519449.5
CDS-3UTR TCA 90 bp AAAATAACTGGCACTAGTGTTATAAGCATATTAATGGACCTGGTAGGGAAAAGTGAATTTGGATGGCTTTaGCTCAATATCTACTTGCAC +
Preference number: 4 (lower is better)
Translates to: KITGTSVISILMDLVGKSEFGWL*LNIYLH
Trigger: GTGCAAGTAGATATTGAGTCAAAGCCATCCAAATTC...ACTTTTCCCTACCAGGTCCATTAATATGCTTATAACACTAGTGCCAGTTATTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341084.7
ENST00000519449.5
CDS-3UTR TCA 90 bp GCCAACTTCTGCTTATGTCAGCTGAACATTGTCCATAAACAAAAGCAAAAGAAATTCCATTGTCTGATGTaGGTGGTTGTTATTTGTTTC +
Preference number: 4 (lower is better)
Translates to: ANFCLCQLNIVHKQKQKKFHCLM*VVVICF
Trigger: GAAACAAATAACAACCACTCACATCAGACAATGGAA...TTTCTTTTGCTTTTGTTTATGGACAATGTTCAGCTGACATAAGCAGAAGTTGGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341084.7
ENST00000519449.5
CDS-3UTR TCA 90 bp AAAATAATGCTAATCATACATGGACCTTTTGTACTTGGTACAAGTTCTGCACCGTCTGCTTATGTCAGCTaGACATTGTCCATAAACAAA +
Preference number: 4 (lower is better)
Translates to: KIMLIIHGPFVLGTSSAPSAYVS*TLSINK
Trigger: TTTGTTTATGGACAATGTTCAGCTGACATAAGCAGA...CGGTGCAGAACTTGTACCAAGTACAAAAGGTCCATGTATGATTAGCATTATTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341084.7
ENST00000519449.5
CDS-3UTR GCA 90 bp TTGGTAACTAAGATCCACATGACACACAATGCCTTGCTGAACACAGAAAATGTACGATTTACAGAAGACTaGTATCATGGATGTTCTTTA +
Preference number: 4 (lower is better)
Translates to: LVTKIHMTHNALLNTENVRFTED*YHGCSL
Trigger: TAAAGAACATCCATGATAGCAGTCTTCTGTAAATCG...TACATTTTCTGTGTTCAGCAAGGCATTGTGTGTCATGTGGATCTTAGTTACCAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341084.7
CDS-3UTR GCA 90 bp TTATACAGGAAATTAACAGTACAGGCAGTATTTTGGCCAACTTCTGCTTATGTCAAGTTGTGCAAAAACTaGCACAATCTTGCTCAAAGT +
Preference number: 4 (lower is better)
Translates to: LYRKLTVQAVFWPTSAYVKLCKN*HNLAQS
Trigger: ACTTTGAGCAAGATTGTGGCAGTTTTTGCACAACTT...GACATAAGCAGAAGTTGGCCAAAATACTGCCTGTACTGTTAATTTCCTGTATAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341084.7
ENST00000519449.5
CDS-3UTR CCA 90 bp TTATACAGGAAATTAACAGTACAGGCAGTATTTTGGCCAACTTCTGCTTATGTCAGAAGACTGCTATCATaGATGTTCTTTAACTCCTCA +
Preference number: 4 (lower is better)
Translates to: LYRKLTVQAVFWPTSAYVRRLLS*MFFNSS
Trigger: TGAGGAGTTAAAGAACATCCATGATAGCAGTCTTCT...GACATAAGCAGAAGTTGGCCAAAATACTGCCTGTACTGTTAATTTCCTGTATAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341084.7
CDS-3UTR CCA 90 bp TTATACAGGAAATTAACAGTACAGGCAGTATTTTGGCCAACTTCTGCTTATGTCTTAATTTTGGACAGCTaGCACATCCAAATGCTATCA +
Preference number: 4 (lower is better)
Translates to: LYRKLTVQAVFWPTSAYVLILDS*HIQMLS
Trigger: TGATAGCATTTGGATGTGCCAGCTGTCCAAAATTAA...GACATAAGCAGAAGTTGGCCAAAATACTGCCTGTACTGTTAATTTCCTGTATAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341084.7
ENST00000519449.5
CDS-3UTR CCA 90 bp AAAATAATGCTAATCATACATGGACCTTTTGTACTTGGTACAAGTTCTGCACCGTCAAGCAATGTTTTGTaGCAAACACACAAAACATGC +
Preference number: 4 (lower is better)
Translates to: KIMLIIHGPFVLGTSSAPSSNVL*QTHKTC
Trigger: GCATGTTTTGTGTGTTTGCCACAAAACATTGCTTGA...CGGTGCAGAACTTGTACCAAGTACAAAAGGTCCATGTATGATTAGCATTATTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000341084.7
ENST00000519449.5
CDS-3UTR TCA 90 bp AAAATAACTGGCACTAGTGTTATAAGCATATTAATGGACCTGGTAGGGAAAAGTTTCCATTGTCTGATGTaGGTGGTTGTTATTTGTTTC +
Preference number: 4 (lower is better)
Translates to: KITGTSVISILMDLVGKSFHCLM*VVVICF
Trigger: GAAACAAATAACAACCACTCACATCAGACAATGGAA...ACTTTTCCCTACCAGGTCCATTAATATGCTTATAACACTAGTGCCAGTTATTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341084.7
ENST00000519449.5
CDS-3UTR GCA 90 bp AAAATAACTGGCACTAGTGTTATAAGCATATTAATGGACCTGGTAGGGAAAAGTACCAGTGTTCCCAGTTaGCACAATATTTTCTTCTTT +
Preference number: 4 (lower is better)
Translates to: KITGTSVISILMDLVGKSTSVPS*HNIFFF
Trigger: AAAGAAGAAAATATTGTGGCAACTGGGAACACTGGT...ACTTTTCCCTACCAGGTCCATTAATATGCTTATAACACTAGTGCCAGTTATTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000341084.7
ENST00000519449.5
CDS-3UTR GCA 90 bp AAAATAACTGGCACTAGTGTTATAAGCATATTAATGGACCTGGTAGGGAAAAGTTTCTTTCTGTACATCTaGTTGTACTTCCAACCTGTT +
Preference number: 4 (lower is better)
Translates to: KITGTSVISILMDLVGKSFFLYI*LYFQPV
Trigger: AACAGGTTGGAAGTACAAGCAGATGTACAGAAAGAA...ACTTTTCCCTACCAGGTCCATTAATATGCTTATAACACTAGTGCCAGTTATTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341084.7
ENST00000519449.5
CDS-3UTR GCA 90 bp AAAATAATGCTAATCATACATGGACCTTTTGTACTTGGTACAAGTTCTGCACCGATTCACTTGAGTTCGTaGTTTGTTGTTCTAACAACT +
Preference number: 4 (lower is better)
Translates to: KIMLIIHGPFVLGTSSAPIHLSS*FVVLTT
Trigger: AGTTGTTAGAACAACAAAGCACGAACTCAAGTGAAT...CGGTGCAGAACTTGTACCAAGTACAAAAGGTCCATGTATGATTAGCATTATTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341084.7
ENST00000519449.5
CDS-3UTR GCA 90 bp GCCAACTTCTGCTTATGTCAGCTGAACATTGTCCATAAACAAAAGCAAAAGAAAATTCACTTGAGTTCGTaGTTTGTTGTTCTAACAACT +
Preference number: 4 (lower is better)
Translates to: ANFCLCQLNIVHKQKQKKIHLSS*FVVLTT
Trigger: AGTTGTTAGAACAACAAAGCACGAACTCAAGTGAAT...TTTCTTTTGCTTTTGTTTATGGACAATGTTCAGCTGACATAAGCAGAAGTTGGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000341084.7
ENST00000519449.5
CDS-3UTR CCA 90 bp AAAATAACTGGCACTAGTGTTATAAGCATATTAATGGACCTGGTAGGGAAAAGTATCAAGCGAATATCATaGGGATTAAACCGTTCAGTA +
Preference number: 4 (lower is better)
Translates to: KITGTSVISILMDLVGKSIKRIS*GLNRSV
Trigger: TACTGAACGGTTTAATCCCCATGATATTCGCTTGAT...ACTTTTCCCTACCAGGTCCATTAATATGCTTATAACACTAGTGCCAGTTATTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341084.7
ENST00000519449.5
CDS GCA 90 bp GCCCCAGGCAGCACGGCTTGCGGGGCGATGTCCCGGCTCCAAATTTaGAGCGAGGCCCGGAAATCGGTCCCGTTAGAGCCGATTTCACCC +
Preference number: 5 (lower is better)
Translates to: APGSTACGAMSRLQI*SEARKSVPLEPISP
Trigger: GGGTGAAATCGGCTCTAACGGGACCGATTTCCGGGCCTCGCTGCAAATTTGGAGCCGGGACATCGCCCCGCAAGCCGTGCTGCCTGGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523167.1
CDS CCA 90 bp GGATTCATGAGCAGAAGCTGTGGGGTAGCGAAGAAATGCAGGGCATaGGTCCCACACTCAAATGCCCTCGGCAGTAGACAGGCAGTGCCA +
Preference number: 5 (lower is better)
Translates to: GFMSRSCGVAKKCRA*VPHSNALGSRQAVP
Trigger: TGGCACTGCCTGTCTACTGCCGAGGGCATTTGAGTGTGGGACCCATGCCCTGCATTTCTTCGCTACCCCACAGCTTCTGCTCATGAATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000522182.1
ENST00000522369.5
CDS TCA 90 bp GGACCACTTGGTGGCACTAGATTTACCTTCAGGCAAGCCACTGGATaGACCGCCAGCATGACTTCGGGTGGCACTGCCATCATCCACACT +
Preference number: 5 (lower is better)
Translates to: GPLGGTRFTFRQATG*TASMTSGGTAIIHT
Trigger: AGTGTGGATGATGGCAGTGCCACCCGAAGTCATGCTGGCGGTTCATCCAGTGGCTTGCCTGAAGGTAAATCTAGTGCCACCAAGTGGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341084.7
ENST00000519449.5
ENST00000520903.1
ENST00000523255.5
CDS CCA 90 bp CTGACAGACTCCCCGTTATACTGGCTCCAGCTAGTGCCATGGTGCTaGCCGTTTCACTCAGGTTGTCTCGGATGGCTCCTATTCGATCCA +
Preference number: 5 (lower is better)
Translates to: LTDSPLYWLQLVPWC*PFHSGCLGWLLFDP
Trigger: TGGATCGAATAGGAGCCATCCGAGACAACCTGAGTGAAACGGCCAGCACCATGGCACTAGCTGGAGCCAGTATAACGGGGAGTCTGTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341084.7
ENST00000519449.5
ENST00000523255.5
CDS CCA 90 bp CACTTCCTGACAGACTCCCCGTTATACTGGCTCCAGCTAGTGCCATaGTGCTGGCCGTTTCACTCAGGTTGTCTCGGATGGCTCCTATTC +
Preference number: 5 (lower is better)
Translates to: HFLTDSPLYWLQLVP*CWPFHSGCLGWLLF
Trigger: GAATAGGAGCCATCCGAGACAACCTGAGTGAAACGGCCAGCACCATGGCACTAGCTGGAGCCAGTATAACGGGGAGTCTGTCAGGAAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341084.7
ENST00000519449.5
ENST00000523255.5
CDS TCA 90 bp GCACTAGATTTACCTTCAGGCAAGCCACTGGATGAACCGCCAGCATaGCTTCGGGTGGCACTGCCATCATCCACACTACTGCTTCCACTG +
Preference number: 5 (lower is better)
Translates to: ALDLPSGKPLDEPPA*LRVALPSSTLLLPL
Trigger: CAGTGGAAGCAGTAGTGTGGATGATGGCAGTGCCACCCGAAGTCATGCTGGCGGTTCATCCAGTGGCTTGCCTGAAGGTAAATCTAGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341084.7
ENST00000519449.5
ENST00000520903.1
ENST00000523255.5
CDS GCA 90 bp GGATGGCTCCTATTCGATCCATGTGGCTTCCACTTGCACTCAAACTaGCAGTCAGCCCACCAACACTTCCCTCCCCTATGCTTGGGTTGT +
Preference number: 5 (lower is better)
Translates to: GWLLFDPCGFHLHSN*QSAHQHFPPLCLGC
Trigger: ACAACCCAAGCATAGGGGAGGGAAGTGTTGGTGGGCTGACTGGCAGTTTGAGTGCAAGTGGAAGCCACATGGATCGAATAGGAGCCATCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341084.7
ENST00000519449.5
ENST00000523255.5
CDS GCA 90 bp CAGGTTGTCTCGGATGGCTCCTATTCGATCCATGTGGCTTCCACTTaGACTCAAACTGCCAGTCAGCCCACCAACACTTCCCTCCCCTAT +
Preference number: 5 (lower is better)
Translates to: QVVSDGSYSIHVAST*TQTASQPTNTSLPY
Trigger: ATAGGGGAGGGAAGTGTTGGTGGGCTGACTGGCAGTTTGAGTGCAAGTGGAAGCCACATGGATCGAATAGGAGCCATCCGAGACAACCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341084.7
ENST00000519449.5
ENST00000523255.5
CDS GCA 90 bp TTCCTGACAGACTCCCCGTTATACTGGCTCCAGCTAGTGCCATGGTaGTGGCCGTTTCACTCAGGTTGTCTCGGATGGCTCCTATTCGAT +
Preference number: 5 (lower is better)
Translates to: FLTDSPLYWLQLVPW*WPFHSGCLGWLLFD
Trigger: ATCGAATAGGAGCCATCCGAGACAACCTGAGTGAAACGGCCAGCACCATGGCACTAGCTGGAGCCAGTATAACGGGGAGTCTGTCAGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341084.7
ENST00000519449.5
ENST00000523255.5
CDS CCA 90 bp CAGCTAGTGCCATGGTGCTGGCCGTTTCACTCAGGTTGTCTCGGATaGCTCCTATTCGATCCATGTGGCTTCCACTTGCACTCAAACTGC +
Preference number: 5 (lower is better)
Translates to: QLVPWCWPFHSGCLG*LLFDPCGFHLHSNC
Trigger: GCAGTTTGAGTGCAAGTGGAAGCCACATGGATCGAATAGGAGCCATCCGAGACAACCTGAGTGAAACGGCCAGCACCATGGCACTAGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341084.7
ENST00000519449.5
ENST00000523255.5
CDS CCA 90 bp GCCGTTTCACTCAGGTTGTCTCGGATGGCTCCTATTCGATCCATGTaGCTTCCACTTGCACTCAAACTGCCAGTCAGCCCACCAACACTT +
Preference number: 5 (lower is better)
Translates to: AVSLRLSRMAPIRSM*LPLALKLPVSPPTL
Trigger: AAGTGTTGGTGGGCTGACTGGCAGTTTGAGTGCAAGTGGAAGCCACATGGATCGAATAGGAGCCATCCGAGACAACCTGAGTGAAACGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341084.7
ENST00000519449.5
ENST00000523255.5
CDS GCA 90 bp TTGCACTCAAACTGCCAGTCAGCCCACCAACACTTCCCTCCCCTATaGTTGGGTTGTGTCTTGCTTCTGCTACTGATGTTGTGTCTACAG +
Preference number: 5 (lower is better)
Translates to: LHSNCQSAHQHFPPL*LGCVLLLLLMLCLQ
Trigger: CTGTAGACACAACATCAGTAGCAGAAGCAAGACACAACCCAAGCATAGGGGAGGGAAGTGTTGGTGGGCTGACTGGCAGTTTGAGTGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341084.7
ENST00000519449.5
ENST00000523255.5
CDS GCA 90 bp CCTTTGACTCTTCCAGCTTCTGGTGACTATAAGCATTCCTCGGCTTaGGGTTACATCACTCCAATCTCCGCCTCCATGAGCACACTGCTT +
Preference number: 5 (lower is better)
Translates to: PLTLPASGDYKHSSA*GYITPISASMSTLL
Trigger: AAGCAGTGTGCTCATGGAGGCGGAGATTGGAGTGATGTAACCGCAAGCCGAGGAATGCTTATAGTCACCAGAAGCTGGAAGAGTCAAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519342.1
ENST00000522182.1
ENST00000523481.5
CDS GCA 90 bp CTTCGGGTGGCACTGCCATCATCCACACTACTGCTTCCACTGTTGTaGCTGAATTTGGATGGCTTTGACTCAATATCTACTTGCACCTCC +
Preference number: 5 (lower is better)
Translates to: LRVALPSSTLLLPLL*LNLDGFDSISTCTS
Trigger: GGAGGTGCAAGTAGATATTGAGTCAAAGCCATCCAAATTCAGGCACAACAGTGGAAGCAGTAGTGTGGATGATGGCAGTGCCACCCGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341084.7
ENST00000519449.5
ENST00000520903.1
ENST00000523255.5
CDS CCA 90 bp ACTCTGTTCCACAGCCCTCTCGCCCACAAGTTAATTTTGGACAGCTaGCACATCCAAATGCTATCACAGCATATCCACAGTCTGGAGCTG +
Preference number: 5 (lower is better)
Translates to: TLFHSPLAHKLILDS*HIQMLSQHIHSLEL
Trigger: CAGCTCCAGACTGTGGATATGCTGTGATAGCATTTGGATGTGCCAGCTGTCCAAAATTAACTTGTGGGCGAGAGGGCTGTGGAACAGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341084.7
ENST00000519449.5
CDS-3UTR CAA 90 bp ATGGACCTTTTGTACTTGGTACAAGTTCTGCACCGTGCTTTGATTTCATGGTTGTGCTCCCACTGGGGCTaGAGGGGAGAATGTGTCCTT +
Preference number: 5 (lower is better)
Translates to: MDLLYLVQVLHRALISWLCSHWG*RGECVL
Trigger: AAGGACACATTCTCCCCTCAAGCCCCAGTGGGAGCA...CAACCATGAAATCAAAGCACGGTGCAGAACTTGTACCAAGTACAAAAGGTCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000519449.5
CDS GCA 90 bp CACCACCTGCTATGGCCAAATTCCGTTTGTGCTTTGAAACATCCTTaGCTTCATAGCGATTGTGAATCTTGCGGCCCACATACACAGGAA +
Preference number: 5 (lower is better)
Translates to: HHLLWPNSVCALKHP*LHSDCESCGPHTQE
Trigger: TTCCTGTGTATGTGGGCCGCAAGATTCACAATCGCTATGAAGGCAAGGATGTTTCAAAGCACAAACGGAATTTGGCCATAGCAGGTGGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341084.7
ENST00000519449.5
ENST00000523255.5
CDS-3UTR CAA 90 bp AAAATAATGCTAATCATACATGGACCTTTTGTACTTGGTACAAGTTCTGCACCGGCTGAGGTGGCAGGGTaGCTTGAGCCCAGGAATTCC +
Preference number: 5 (lower is better)
Translates to: KIMLIIHGPFVLGTSSAPAEVAG*LEPRNS
Trigger: GGAATTCCTGGGCTCAAGCAACCCTGCCACCTCAGC...CGGTGCAGAACTTGTACCAAGTACAAAAGGTCCATGTATGATTAGCATTATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519449.5
CDS-3UTR CAA 90 bp GCCAACTTCTGCTTATGTCAGCTGAACATTGTCCATAAACAAAAGCAAAAGAAAGCTCTGGGCTCTCTCTaGTCGAGCAGCATCACAGGT +
Preference number: 5 (lower is better)
Translates to: ANFCLCQLNIVHKQKQKKALGSL*SSSITG
Trigger: ACCTGTGATGCTGCTCGACAAGAGAGAGCCCAGAGC...TTTCTTTTGCTTTTGTTTATGGACAATGTTCAGCTGACATAAGCAGAAGTTGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341084.7
ENST00000519449.5
CDS-3UTR CAA 90 bp ATGGACCTTTTGTACTTGGTACAAGTTCTGCACCGTGCTTTGATTTCATGGTTGCTACTGCTTCCACTGTaGTGCCTGAATTTGGATGGC +
Preference number: 5 (lower is better)
Translates to: MDLLYLVQVLHRALISWLLLLPL*CLNLDG
Trigger: GCCATCCAAATTCAGGCACAACAGTGGAAGCAGTAG...CAACCATGAAATCAAAGCACGGTGCAGAACTTGTACCAAGTACAAAAGGTCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341084.7
ENST00000519449.5
CDS TCA 90 bp ATCCACACTACTGCTTCCACTGTTGTGCCTGAATTTGGATGGCTTTaGCTCAATATCTACTTGCACCTCCATACTGTTGCCTTCTTTGTC +
Preference number: 5 (lower is better)
Translates to: IHTTASTVVPEFGWL*LNIYLHLHTVAFFV
Trigger: GACAAAGAAGGCAACAGTATGGAGGTGCAAGTAGATATTGAGTCAAAGCCATCCAAATTCAGGCACAACAGTGGAAGCAGTAGTGTGGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341084.7
ENST00000519449.5
ENST00000520903.1
ENST00000523255.5
CDS GCA 90 bp AGCATATCCACAGTCTGGAGCTGGACACCACCTACAATCAGGATCTaGAACAAGCCACCGTCTAAGCATAAATTCTTCGTATTTTTCCAT +
Preference number: 5 (lower is better)
Translates to: SISTVWSWTPPTIRI*NKPPSKHKFFVFFH
Trigger: ATGGAAAAATACGAAGAATTTATGCTTAGACGGTGGCTTGTTGCAGATCCTGATTGTAGGTGGTGTCCAGCTCCAGACTGTGGATATGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341084.7
ENST00000519449.5
CDS GCA 90 bp TTCTTTGTCCAATGGGATGTAGGAATTCAGAATGGATCCTGCCATTaGTTTGGTGCTGGCATTATCACTAACTGTTCCCAAGCTGACTGT +
Preference number: 5 (lower is better)
Translates to: FFVQWDVGIQNGSCH*FGAGIITNCSQADC
Trigger: ACAGTCAGCTTGGGAACAGTTAGTGATAATGCCAGCACCAAAGCAATGGCAGGATCCATTCTGAATTCCTACATCCCATTGGACAAAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341084.7
ENST00000519449.5
ENST00000520903.1
ENST00000523255.5
ENST00000523644.1
CDS-3UTR CAA 90 bp ATGGACCTTTTGTACTTGGTACAAGTTCTGCACCGTGCTTTGATTTCATGGTTGGATCCTGCCATTGCTTaGGTGCTGGCATTATCACTA +
Preference number: 5 (lower is better)
Translates to: MDLLYLVQVLHRALISWLDPAIA*VLALSL
Trigger: TAGTGATAATGCCAGCACCAAAGCAATGGCAGGATC...CAACCATGAAATCAAAGCACGGTGCAGAACTTGTACCAAGTACAAAAGGTCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341084.7
ENST00000519449.5
CDS-3UTR CAA 90 bp TTGTACTTGGTACAAGTTCTGCACCGTGCTTTGATTTCATGGTTGGAGAAGATATGCACCTCCATACTGTaGCCTTCTTTGTCCAATGGG +
Preference number: 5 (lower is better)
Translates to: LYLVQVLHRALISWLEKICTSIL*PSLSNG
Trigger: CCCATTGGACAAAGAAGGCAACAGTATGGAGGTGCA...TATCTTCTCCAACCATGAAATCAAAGCACGGTGCAGAACTTGTACCAAGTACAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341084.7
ENST00000519449.5
CDS-3UTR CAA 90 bp TTGGTAACTAAGATCCACATGACACACAATGCCTTGCTGAACACAGAAAATGTACCTGCTGTTGCTTCTTaGGACCACTTGGTGGCACTA +
Preference number: 5 (lower is better)
Translates to: LVTKIHMTHNALLNTENVPAVAS*DHLVAL
Trigger: TAGTGCCACCAAGTGGTCCAAAGAAGCAACAGCAGG...TACATTTTCTGTGTTCAGCAAGGCATTGTGTGTCATGTGGATCTTAGTTACCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341084.7
ENST00000519449.5
CDS CCA 90 bp TTCAGAGAATTCTTGAAAAGTTCGATTTACAGAAGACTGCTATCATaGATGTTAGTTCTGGAGGCCAGAAGTCCAAAATCCAGCTGGGCC +
Preference number: 5 (lower is better)
Translates to: FREFLKSSIYRRLLS*MLVLEARSPKSSWA
Trigger: GGCCCAGCTGGATTTTGGACTTCTGGCCTCCAGAACTAACATCCATGATAGCAGTCTTCTGTAAATCGAACTTTTCAAGAATTCTCTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000432381.2
ENST00000517584.5
CDS-3UTR CAA 90 bp ATGGACCTTTTGTACTTGGTACAAGTTCTGCACCGTGCTTTGATTTCATGGTTGTTTTTGGGTGCCTTTTaGACTGAAGGCAAGCTCACA +
Preference number: 5 (lower is better)
Translates to: MDLLYLVQVLHRALISWLFLGAF*TEGKLT
Trigger: TGTGAGCTTGCCTTCAGTCAAAAAGGCACCCAAAAA...CAACCATGAAATCAAAGCACGGTGCAGAACTTGTACCAAGTACAAAAGGTCCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000341084.7
ENST00000519449.5
CDS-3UTR CAA 90 bp TTGTACTTGGTACAAGTTCTGCACCGTGCTTTGATTTCATGGTTGGAGAAGATATGCTTGGGTTGTGTCTaGCTTCTGCTACTGATGTTG +
Preference number: 5 (lower is better)
Translates to: LYLVQVLHRALISWLEKICLGCV*LLLLML
Trigger: CAACATCAGTAGCAGAAGCAAGACACAACCCAAGCA...TATCTTCTCCAACCATGAAATCAAAGCACGGTGCAGAACTTGTACCAAGTACAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341084.7
ENST00000519449.5
CDS-3UTR CAA 90 bp AAAATAATGCTAATCATACATGGACCTTTTGTACTTGGTACAAGTTCTGCACCGTTCCCTCCCCTATGCTaGGGTTGTGTCTTGCTTCTG +
Preference number: 5 (lower is better)
Translates to: KIMLIIHGPFVLGTSSAPFPPLC*GCVLLL
Trigger: CAGAAGCAAGACACAACCCAAGCATAGGGGAGGGAA...CGGTGCAGAACTTGTACCAAGTACAAAAGGTCCATGTATGATTAGCATTATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000341084.7
ENST00000519449.5
CDS-3UTR CAA 90 bp TTATACAGGAAATTAACAGTACAGGCAGTATTTTGGCCAACTTCTGCTTATGTCGCCGTTTCACTCAGGTaGTCTCGGATGGCTCCTATT +
Preference number: 5 (lower is better)
Translates to: LYRKLTVQAVFWPTSAYVAVSLR*SRMAPI
Trigger: AATAGGAGCCATCCGAGACAACCTGAGTGAAACGGC...GACATAAGCAGAAGTTGGCCAAAATACTGCCTGTACTGTTAATTTCCTGTATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341084.7
ENST00000519449.5
CDS-3UTR CAA 90 bp AAAATAATGCTAATCATACATGGACCTTTTGTACTTGGTACAAGTTCTGCACCGGCATCACAGGTCTGGTaGGGGTGCCAAATCTGTTTA +
Preference number: 5 (lower is better)
Translates to: KIMLIIHGPFVLGTSSAPASQVW*GCQICL
Trigger: TAAACAGATTTGGCACCCCAACCAGACCTGTGATGC...CGGTGCAGAACTTGTACCAAGTACAAAAGGTCCATGTATGATTAGCATTATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000341084.7
ENST00000519449.5
CDS-3UTR CAA 90 bp GCCAACTTCTGCTTATGTCAGCTGAACATTGTCCATAAACAAAAGCAAAAGAAAGCATCACAGGTCTGGTaGGGGTGCCAAATCTGTTTA +
Preference number: 5 (lower is better)
Translates to: ANFCLCQLNIVHKQKQKKASQVW*GCQICL
Trigger: TAAACAGATTTGGCACCCCAACCAGACCTGTGATGC...TTTCTTTTGCTTTTGTTTATGGACAATGTTCAGCTGACATAAGCAGAAGTTGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000341084.7
ENST00000519449.5
CDS-3UTR CAA 90 bp TTGGTAACTAAGATCCACATGACACACAATGCCTTGCTGAACACAGAAAATGTATGCTTGGGTTGTGTCTaGCTTCTGCTACTGATGTTG +
Preference number: 5 (lower is better)
Translates to: LVTKIHMTHNALLNTENVCLGCV*LLLLML
Trigger: CAACATCAGTAGCAGAAGCAAGACACAACCCAAGCA...TACATTTTCTGTGTTCAGCAAGGCATTGTGTGTCATGTGGATCTTAGTTACCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341084.7
ENST00000519449.5
CDS-3UTR CAA 90 bp AAAATAATGCTAATCATACATGGACCTTTTGTACTTGGTACAAGTTCTGCACCGTCCCCTATGCTTGGGTaGTGTCTTGCTTCTGCTACT +
Preference number: 5 (lower is better)
Translates to: KIMLIIHGPFVLGTSSAPSPMLG*CLASAT
Trigger: AGTAGCAGAAGCAAGACACAACCCAAGCATAGGGGA...CGGTGCAGAACTTGTACCAAGTACAAAAGGTCCATGTATGATTAGCATTATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000341084.7
ENST00000519449.5
CDS-3UTR CAA 90 bp TTATACAGGAAATTAACAGTACAGGCAGTATTTTGGCCAACTTCTGCTTATGTCTCCCCTATGCTTGGGTaGTGTCTTGCTTCTGCTACT +
Preference number: 5 (lower is better)
Translates to: LYRKLTVQAVFWPTSAYVSPMLG*CLASAT
Trigger: AGTAGCAGAAGCAAGACACAACCCAAGCATAGGGGA...GACATAAGCAGAAGTTGGCCAAAATACTGCCTGTACTGTTAATTTCCTGTATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341084.7
ENST00000519449.5
CDS-3UTR CAA 90 bp AAAATAACTGGCACTAGTGTTATAAGCATATTAATGGACCTGGTAGGGAAAAGTTTCCCTCCCCTATGCTaGGGTTGTGTCTTGCTTCTG +
Preference number: 5 (lower is better)
Translates to: KITGTSVISILMDLVGKSFPPLC*GCVLLL
Trigger: CAGAAGCAAGACACAACCCAAGCATAGGGGAGGGAA...ACTTTTCCCTACCAGGTCCATTAATATGCTTATAACACTAGTGCCAGTTATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000341084.7
ENST00000519449.5
CDS-3UTR CAA 90 bp AAAATAACTGGCACTAGTGTTATAAGCATATTAATGGACCTGGTAGGGAAAAGTGCCGTTTCACTCAGGTaGTCTCGGATGGCTCCTATT +
Preference number: 5 (lower is better)
Translates to: KITGTSVISILMDLVGKSAVSLR*SRMAPI
Trigger: AATAGGAGCCATCCGAGACAACCTGAGTGAAACGGC...ACTTTTCCCTACCAGGTCCATTAATATGCTTATAACACTAGTGCCAGTTATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341084.7
ENST00000519449.5
CDS-3UTR CAA 90 bp TTGGTAACTAAGATCCACATGACACACAATGCCTTGCTGAACACAGAAAATGTAGATCCTGCCATTGCTTaGGTGCTGGCATTATCACTA +
Preference number: 5 (lower is better)
Translates to: LVTKIHMTHNALLNTENVDPAIA*VLALSL
Trigger: TAGTGATAATGCCAGCACCAAAGCAATGGCAGGATC...TACATTTTCTGTGTTCAGCAAGGCATTGTGTGTCATGTGGATCTTAGTTACCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341084.7
ENST00000519449.5
CDS-3UTR CAA 90 bp TTATACAGGAAATTAACAGTACAGGCAGTATTTTGGCCAACTTCTGCTTATGTCTGCACCTCCATACTGTaGCCTTCTTTGTCCAATGGG +
Preference number: 5 (lower is better)
Translates to: LYRKLTVQAVFWPTSAYVCTSIL*PSLSNG
Trigger: CCCATTGGACAAAGAAGGCAACAGTATGGAGGTGCA...GACATAAGCAGAAGTTGGCCAAAATACTGCCTGTACTGTTAATTTCCTGTATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341084.7
ENST00000519449.5
CDS-3UTR CAA 90 bp GCCAACTTCTGCTTATGTCAGCTGAACATTGTCCATAAACAAAAGCAAAAGAAACTACTGCTTCCACTGTaGTGCCTGAATTTGGATGGC +
Preference number: 5 (lower is better)
Translates to: ANFCLCQLNIVHKQKQKKLLLPL*CLNLDG
Trigger: GCCATCCAAATTCAGGCACAACAGTGGAAGCAGTAG...TTTCTTTTGCTTTTGTTTATGGACAATGTTCAGCTGACATAAGCAGAAGTTGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341084.7
ENST00000519449.5
CDS-3UTR CAA 90 bp AAAATAACTGGCACTAGTGTTATAAGCATATTAATGGACCTGGTAGGGAAAAGTCCTGCTGTTGCTTCTTaGGACCACTTGGTGGCACTA +
Preference number: 5 (lower is better)
Translates to: KITGTSVISILMDLVGKSPAVAS*DHLVAL
Trigger: TAGTGCCACCAAGTGGTCCAAAGAAGCAACAGCAGG...ACTTTTCCCTACCAGGTCCATTAATATGCTTATAACACTAGTGCCAGTTATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341084.7
ENST00000519449.5
CDS-3UTR CAA 90 bp TTGGTAACTAAGATCCACATGACACACAATGCCTTGCTGAACACAGAAAATGTAGTTCTGCACCGTGCTTaGATTTCATGGTTGGAGAAG +
Preference number: 5 (lower is better)
Translates to: LVTKIHMTHNALLNTENVVLHRA*ISWLEK
Trigger: CTTCTCCAACCATGAAATCAAAGCACGGTGCAGAAC...TACATTTTCTGTGTTCAGCAAGGCATTGTGTGTCATGTGGATCTTAGTTACCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341084.7
ENST00000519449.5
CDS-3UTR CAA 90 bp TTGTACTTGGTACAAGTTCTGCACCGTGCTTTGATTTCATGGTTGGAGAAGATAATGGACCTTTTGTACTaGGTACAAGTTCTGCACCGT +
Preference number: 5 (lower is better)
Translates to: LYLVQVLHRALISWLEKIMDLLY*VQVLHR
Trigger: ACGGTGCAGAACTTGTACCAAGTACAAAAGGTCCAT...TATCTTCTCCAACCATGAAATCAAAGCACGGTGCAGAACTTGTACCAAGTACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341084.7
ENST00000519449.5
CDS-3UTR CAA 90 bp ATGGACCTTTTGTACTTGGTACAAGTTCTGCACCGTGCTTTGATTTCATGGTTGCGCCATTTAGCTCCCTaGATTTACGTTTGTTATCTT +
Preference number: 5 (lower is better)
Translates to: MDLLYLVQVLHRALISWLRHLAP*IYVCYL
Trigger: AAGATAACAAACGTAAATCAAGGGAGCTAAATGGCG...CAACCATGAAATCAAAGCACGGTGCAGAACTTGTACCAAGTACAAAAGGTCCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341084.7
ENST00000519449.5
CDS-3UTR CAA 90 bp TTGTACTTGGTACAAGTTCTGCACCGTGCTTTGATTTCATGGTTGGAGAAGATACTGTTGTGCCTGAATTaGGATGGCTTTGACTCAATA +
Preference number: 5 (lower is better)
Translates to: LYLVQVLHRALISWLEKILLCLN*DGFDSI
Trigger: TATTGAGTCAAAGCCATCCAAATTCAGGCACAACAG...TATCTTCTCCAACCATGAAATCAAAGCACGGTGCAGAACTTGTACCAAGTACAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341084.7
ENST00000519449.5
CDS-3UTR CAA 90 bp AAAATAATGCTAATCATACATGGACCTTTTGTACTTGGTACAAGTTCTGCACCGGTTCTGCACCGTGCTTaGATTTCATGGTTGGAGAAG +
Preference number: 5 (lower is better)
Translates to: KIMLIIHGPFVLGTSSAPVLHRA*ISWLEK
Trigger: CTTCTCCAACCATGAAATCAAAGCACGGTGCAGAAC...CGGTGCAGAACTTGTACCAAGTACAAAAGGTCCATGTATGATTAGCATTATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341084.7
ENST00000519449.5
CDS-3UTR CAA 90 bp ATGGACCTTTTGTACTTGGTACAAGTTCTGCACCGTGCTTTGATTTCATGGTTGTCATGTCTAAAATGCTaGTTAGAATTGAGACAGGGT +
Preference number: 5 (lower is better)
Translates to: MDLLYLVQVLHRALISWLSCLKC*LELRQG
Trigger: ACCCTGTCTCAATTCTAACAAGCATTTTAGACATGA...CAACCATGAAATCAAAGCACGGTGCAGAACTTGTACCAAGTACAAAAGGTCCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341084.7
ENST00000519449.5
CDS-3UTR CAA 90 bp GCCAACTTCTGCTTATGTCAGCTGAACATTGTCCATAAACAAAAGCAAAAGAAATTTTTGGGTGCCTTTTaGACTGAAGGCAAGCTCACA +
Preference number: 5 (lower is better)
Translates to: ANFCLCQLNIVHKQKQKKFLGAF*TEGKLT
Trigger: TGTGAGCTTGCCTTCAGTCAAAAAGGCACCCAAAAA...TTTCTTTTGCTTTTGTTTATGGACAATGTTCAGCTGACATAAGCAGAAGTTGGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000341084.7
ENST00000519449.5
CDS-3UTR CAA 90 bp GCCAACTTCTGCTTATGTCAGCTGAACATTGTCCATAAACAAAAGCAAAAGAAAGTATACTTTCAATACTaGCAATTCCATCCACCCCGC +
Preference number: 5 (lower is better)
Translates to: ANFCLCQLNIVHKQKQKKVYFQY*QFHPPR
Trigger: GCGGGGTGGATGGAATTGCAAGTATTGAAAGTATAC...TTTCTTTTGCTTTTGTTTATGGACAATGTTCAGCTGACATAAGCAGAAGTTGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000341084.7
ENST00000519449.5
CDS-3UTR CAA 90 bp TTGTACTTGGTACAAGTTCTGCACCGTGCTTTGATTTCATGGTTGGAGAAGATAAATTCCGTTTGTGCTTaGAAACATCCTTGCCTTCAT +
Preference number: 5 (lower is better)
Translates to: LYLVQVLHRALISWLEKINSVCA*KHPCLH
Trigger: ATGAAGGCAAGGATGTTTCAAAGCACAAACGGAATT...TATCTTCTCCAACCATGAAATCAAAGCACGGTGCAGAACTTGTACCAAGTACAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341084.7
ENST00000519449.5
CDS-3UTR CAA 90 bp TTGGTAACTAAGATCCACATGACACACAATGCCTTGCTGAACACAGAAAATGTAATGGCCAAATTCCGTTaGTGCTTTGAAACATCCTTG +
Preference number: 5 (lower is better)
Translates to: LVTKIHMTHNALLNTENVMAKFR*CFETSL
Trigger: CAAGGATGTTTCAAAGCACAAACGGAATTTGGCCAT...TACATTTTCTGTGTTCAGCAAGGCATTGTGTGTCATGTGGATCTTAGTTACCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341084.7
ENST00000519449.5
CDS-3UTR CAA 90 bp TTGTACTTGGTACAAGTTCTGCACCGTGCTTTGATTTCATGGTTGGAGAAGATAGTGAGTGGTTGTTATTaGTTTCTTTTAGTGCATCGC +
Preference number: 5 (lower is better)
Translates to: LYLVQVLHRALISWLEKIVSGCY*FLLVHR
Trigger: GCGATGCACTAAAAGAAACAAATAACAACCACTCAC...TATCTTCTCCAACCATGAAATCAAAGCACGGTGCAGAACTTGTACCAAGTACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341084.7
ENST00000519449.5
CDS-3UTR CAA 90 bp TTGGTAACTAAGATCCACATGACACACAATGCCTTGCTGAACACAGAAAATGTAAGTACAGGCAGTATTTaGGCCAACTTCTGCTTATGT +
Preference number: 5 (lower is better)
Translates to: LVTKIHMTHNALLNTENVSTGSI*ANFCLC
Trigger: ACATAAGCAGAAGTTGGCCAAAATACTGCCTGTACT...TACATTTTCTGTGTTCAGCAAGGCATTGTGTGTCATGTGGATCTTAGTTACCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341084.7
ENST00000519449.5
CDS CCA 90 bp ATGGATGTTCAGAGTAACAGAAACCAAAGAGGCTGTAACTTAGTTTaGTCTCTCAAACTAACGTCAATTCTTCTGACATTTGAGCTGGAT +
Preference number: 5 (lower is better)
Translates to: MDVQSNRNQRGCNLV*SLKLTSILLTFELD
Trigger: ATCCAGCTCAAATGTCAGAAGAATTGACGTTAGTTTGAGAGACCAAACTAAGTTACAGCCTCTTTGGTTTCTGTTACTCTGAACATCCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522369.5
CDS-3UTR CAA 90 bp AAAATAACTGGCACTAGTGTTATAAGCATATTAATGGACCTGGTAGGGAAAAGTGTATACTTTCAATACTaGCAATTCCATCCACCCCGC +
Preference number: 5 (lower is better)
Translates to: KITGTSVISILMDLVGKSVYFQY*QFHPPR
Trigger: GCGGGGTGGATGGAATTGCAAGTATTGAAAGTATAC...ACTTTTCCCTACCAGGTCCATTAATATGCTTATAACACTAGTGCCAGTTATTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000341084.7
ENST00000519449.5
CDS-3UTR CAA 90 bp GCCAACTTCTGCTTATGTCAGCTGAACATTGTCCATAAACAAAAGCAAAAGAAAATGGCCAAATTCCGTTaGTGCTTTGAAACATCCTTG +
Preference number: 5 (lower is better)
Translates to: ANFCLCQLNIVHKQKQKKMAKFR*CFETSL
Trigger: CAAGGATGTTTCAAAGCACAAACGGAATTTGGCCAT...TTTCTTTTGCTTTTGTTTATGGACAATGTTCAGCTGACATAAGCAGAAGTTGGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000341084.7
ENST00000519449.5
CDS-3UTR CAA 90 bp TTATACAGGAAATTAACAGTACAGGCAGTATTTTGGCCAACTTCTGCTTATGTCCTGTTGTGCCTGAATTaGGATGGCTTTGACTCAATA +
Preference number: 5 (lower is better)
Translates to: LYRKLTVQAVFWPTSAYVLLCLN*DGFDSI
Trigger: TATTGAGTCAAAGCCATCCAAATTCAGGCACAACAG...GACATAAGCAGAAGTTGGCCAAAATACTGCCTGTACTGTTAATTTCCTGTATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341084.7
ENST00000519449.5
CDS-3UTR CAA 90 bp AAAATAATGCTAATCATACATGGACCTTTTGTACTTGGTACAAGTTCTGCACCGGAGCCTCAAATTCACTaGAGTTCGTGCTTTGTTGTT +
Preference number: 5 (lower is better)
Translates to: KIMLIIHGPFVLGTSSAPEPQIH*SSCFVV
Trigger: AACAACAAAGCACGAACTCAAGTGAATTTGAGGCTC...CGGTGCAGAACTTGTACCAAGTACAAAAGGTCCATGTATGATTAGCATTATTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341084.7
ENST00000519449.5
CDS-3UTR CAA 90 bp TTATACAGGAAATTAACAGTACAGGCAGTATTTTGGCCAACTTCTGCTTATGTCGAGCCTCAAATTCACTaGAGTTCGTGCTTTGTTGTT +
Preference number: 5 (lower is better)
Translates to: LYRKLTVQAVFWPTSAYVEPQIH*SSCFVV
Trigger: AACAACAAAGCACGAACTCAAGTGAATTTGAGGCTC...GACATAAGCAGAAGTTGGCCAAAATACTGCCTGTACTGTTAATTTCCTGTATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341084.7
ENST00000519449.5
CDS-3UTR CAA 90 bp TTATACAGGAAATTAACAGTACAGGCAGTATTTTGGCCAACTTCTGCTTATGTCCAGCTCCAAACACGGTaGTACAGTGGTAATTATTCT +
Preference number: 5 (lower is better)
Translates to: LYRKLTVQAVFWPTSAYVQLQTR*YSGNYS
Trigger: AGAATAATTACCACTGTACAACCGTGTTTGGAGCTG...GACATAAGCAGAAGTTGGCCAAAATACTGCCTGTACTGTTAATTTCCTGTATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341084.7
ENST00000519449.5
CDS-3UTR CAA 90 bp TTGTACTTGGTACAAGTTCTGCACCGTGCTTTGATTTCATGGTTGGAGAAGATAAAAACTGCCACAATCTaGCTCAAAGTGTCTAAGTAT +
Preference number: 5 (lower is better)
Translates to: LYLVQVLHRALISWLEKIKTATI*LKVSKY
Trigger: ATACTTAGACACTTTGAGCAAGATTGTGGCAGTTTT...TATCTTCTCCAACCATGAAATCAAAGCACGGTGCAGAACTTGTACCAAGTACAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341084.7
ENST00000519449.5
CDS-3UTR CAA 90 bp AAAATAACTGGCACTAGTGTTATAAGCATATTAATGGACCTGGTAGGGAAAAGTATGGACCTTTTGTACTaGGTACAAGTTCTGCACCGT +
Preference number: 5 (lower is better)
Translates to: KITGTSVISILMDLVGKSMDLLY*VQVLHR
Trigger: ACGGTGCAGAACTTGTACCAAGTACAAAAGGTCCAT...ACTTTTCCCTACCAGGTCCATTAATATGCTTATAACACTAGTGCCAGTTATTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000341084.7
ENST00000519449.5
CDS-3UTR CAA 90 bp GCCAACTTCTGCTTATGTCAGCTGAACATTGTCCATAAACAAAAGCAAAAGAAAAGTACAGGCAGTATTTaGGCCAACTTCTGCTTATGT +
Preference number: 5 (lower is better)
Translates to: ANFCLCQLNIVHKQKQKKSTGSI*ANFCLC
Trigger: ACATAAGCAGAAGTTGGCCAAAATACTGCCTGTACT...TTTCTTTTGCTTTTGTTTATGGACAATGTTCAGCTGACATAAGCAGAAGTTGGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000341084.7
ENST00000519449.5
CDS TCA 90 bp GTATCAGCCACTAACAATTTACCAACTACTTTAAGGCTAGGCTCTTaGATCTGTAATACTTTCAACCAAGACTTACTGCAGGCTCAATTT +
Preference number: 5 (lower is better)
Translates to: VSATNNLPTTLRLGS*ICNTFNQDLLQAQF
Trigger: AAATTGAGCCTGCAGTAAGTCTTGGTTGAAAGTATTACAGATTCAAGAGCCTAGCCTTAAAGTAGTTGGTAAATTGTTAGTGGCTGATAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520071.1
CDS-3UTR CAA 90 bp TTGGTAACTAAGATCCACATGACACACAATGCCTTGCTGAACACAGAAAATGTAAAATGCTTGTTAGAATaGAGACAGGGTCAGTGTTTA +
Preference number: 5 (lower is better)
Translates to: LVTKIHMTHNALLNTENVKCLLE*RQGQCL
Trigger: TAAACACTGACCCTGTCTCAATTCTAACAAGCATTT...TACATTTTCTGTGTTCAGCAAGGCATTGTGTGTCATGTGGATCTTAGTTACCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341084.7
ENST00000519449.5
CDS-3UTR CAA 90 bp AAAATAATGCTAATCATACATGGACCTTTTGTACTTGGTACAAGTTCTGCACCGAATTCCGTTTGTGCTTaGAAACATCCTTGCCTTCAT +
Preference number: 5 (lower is better)
Translates to: KIMLIIHGPFVLGTSSAPNSVCA*KHPCLH
Trigger: ATGAAGGCAAGGATGTTTCAAAGCACAAACGGAATT...CGGTGCAGAACTTGTACCAAGTACAAAAGGTCCATGTATGATTAGCATTATTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341084.7
ENST00000519449.5
CDS-3UTR CAA 90 bp GCCAACTTCTGCTTATGTCAGCTGAACATTGTCCATAAACAAAAGCAAAAGAAAGTGAGTGGTTGTTATTaGTTTCTTTTAGTGCATCGC +
Preference number: 5 (lower is better)
Translates to: ANFCLCQLNIVHKQKQKKVSGCY*FLLVHR
Trigger: GCGATGCACTAAAAGAAACAAATAACAACCACTCAC...TTTCTTTTGCTTTTGTTTATGGACAATGTTCAGCTGACATAAGCAGAAGTTGGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000341084.7
ENST00000519449.5
CDS-3UTR CAA 90 bp AAAATAACTGGCACTAGTGTTATAAGCATATTAATGGACCTGGTAGGGAAAAGTCAGCTCCAAACACGGTaGTACAGTGGTAATTATTCT +
Preference number: 5 (lower is better)
Translates to: KITGTSVISILMDLVGKSQLQTR*YSGNYS
Trigger: AGAATAATTACCACTGTACAACCGTGTTTGGAGCTG...ACTTTTCCCTACCAGGTCCATTAATATGCTTATAACACTAGTGCCAGTTATTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341084.7
ENST00000519449.5
CDS-3UTR CAA 90 bp AAAATAATGCTAATCATACATGGACCTTTTGTACTTGGTACAAGTTCTGCACCGGCTTCAAGCAATGTTTaGTGGCAAACACACAAAACA +
Preference number: 5 (lower is better)
Translates to: KIMLIIHGPFVLGTSSAPASSNV*WQTHKT
Trigger: TGTTTTGTGTGTTTGCCACAAAACATTGCTTGAAGC...CGGTGCAGAACTTGTACCAAGTACAAAAGGTCCATGTATGATTAGCATTATTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000341084.7
ENST00000519449.5
CDS-3UTR CAA 90 bp GCCAACTTCTGCTTATGTCAGCTGAACATTGTCCATAAACAAAAGCAAAAGAAAGCTTCAAGCAATGTTTaGTGGCAAACACACAAAACA +
Preference number: 5 (lower is better)
Translates to: ANFCLCQLNIVHKQKQKKASSNV*WQTHKT
Trigger: TGTTTTGTGTGTTTGCCACAAAACATTGCTTGAAGC...TTTCTTTTGCTTTTGTTTATGGACAATGTTCAGCTGACATAAGCAGAAGTTGGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000341084.7
ENST00000519449.5
CDS-3UTR CAA 90 bp GCCAACTTCTGCTTATGTCAGCTGAACATTGTCCATAAACAAAAGCAAAAGAAATCATACATGGACCTTTaGTACTTGGTACAAGTTCTG +
Preference number: 5 (lower is better)
Translates to: ANFCLCQLNIVHKQKQKKSYMDL*YLVQVL
Trigger: CAGAACTTGTACCAAGTACAAAAGGTCCATGTATGA...TTTCTTTTGCTTTTGTTTATGGACAATGTTCAGCTGACATAAGCAGAAGTTGGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341084.7
ENST00000519449.5
CDS TCA 90 bp AGTCATGATGTAAGAATATCCTACTTGGTTCCTTCAGAGAATTCTTaGAAAGTTCGATTTACAGAAGACTGCTATCATGGATGTTCAGAG +
Preference number: 5 (lower is better)
Translates to: SHDVRISYLVPSENS*KVRFTEDCYHGCSE
Trigger: CTCTGAACATCCATGATAGCAGTCTTCTGTAAATCGAACTTTTCAAGAATTCTCTGAAGGAACCAAGTAGGATATTCTTACATCATGACT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522369.5
CDS TCA 90 bp AGTCATGATGTAAGAATATCCTACTTGGTTCCTTCAGAGAATTCTTaGAAAGTTCGATTTACAGAAGACTGCTATCATGGATGTTCTTCC +
Preference number: 5 (lower is better)
Translates to: SHDVRISYLVPSENS*KVRFTEDCYHGCSS
Trigger: GGAAGAACATCCATGATAGCAGTCTTCTGTAAATCGAACTTTTCAAGAATTCTCTGAAGGAACCAAGTAGGATATTCTTACATCATGACT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523167.1
CDS-3UTR CAA 90 bp GCCAACTTCTGCTTATGTCAGCTGAACATTGTCCATAAACAAAAGCAAAAGAAAGTAAGAATATCCTACTaGGTTCCTTCAGAGAATTCT +
Preference number: 5 (lower is better)
Translates to: ANFCLCQLNIVHKQKQKKVRISY*VPSENS
Trigger: AGAATTCTCTGAAGGAACCAAGTAGGATATTCTTAC...TTTCTTTTGCTTTTGTTTATGGACAATGTTCAGCTGACATAAGCAGAAGTTGGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341084.7
ENST00000519449.5
CDS-3UTR CAA 90 bp AAAATAATGCTAATCATACATGGACCTTTTGTACTTGGTACAAGTTCTGCACCGGTAAGAATATCCTACTaGGTTCCTTCAGAGAATTCT +
Preference number: 5 (lower is better)
Translates to: KIMLIIHGPFVLGTSSAPVRISY*VPSENS
Trigger: AGAATTCTCTGAAGGAACCAAGTAGGATATTCTTAC...CGGTGCAGAACTTGTACCAAGTACAAAAGGTCCATGTATGATTAGCATTATTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341084.7
ENST00000519449.5
CDS-3UTR CAA 90 bp AAAATAACTGGCACTAGTGTTATAAGCATATTAATGGACCTGGTAGGGAAAAGTTCATACATGGACCTTTaGTACTTGGTACAAGTTCTG +
Preference number: 5 (lower is better)
Translates to: KITGTSVISILMDLVGKSSYMDL*YLVQVL
Trigger: CAGAACTTGTACCAAGTACAAAAGGTCCATGTATGA...ACTTTTCCCTACCAGGTCCATTAATATGCTTATAACACTAGTGCCAGTTATTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341084.7
ENST00000519449.5
CDS TCA 90 bp AGTCATGATGTAAGAATATCCTACTTGGTTCCTTCAGAGAATTCTTaGAAAGTTCGATTTACAGAAGACTGCTATCATGGATGTTCTGTA +
Preference number: 5 (lower is better)
Translates to: SHDVRISYLVPSENS*KVRFTEDCYHGCSV
Trigger: TACAGAACATCCATGATAGCAGTCTTCTGTAAATCGAACTTTTCAAGAATTCTCTGAAGGAACCAAGTAGGATATTCTTACATCATGACT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519449.5
ENST00000519527.5
ENST00000523481.5
CDS-3UTR CAA 90 bp AAAATAACTGGCACTAGTGTTATAAGCATATTAATGGACCTGGTAGGGAAAAGTAAATGCTTGTTAGAATaGAGACAGGGTCAGTGTTTA +
Preference number: 5 (lower is better)
Translates to: KITGTSVISILMDLVGKSKCLLE*RQGQCL
Trigger: TAAACACTGACCCTGTCTCAATTCTAACAAGCATTT...ACTTTTCCCTACCAGGTCCATTAATATGCTTATAACACTAGTGCCAGTTATTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341084.7
ENST00000519449.5
CDS GCA 72 bp AGCAGCCTGAGGAAGCGCGGGGGAGGGTCCCTCCGATaGGCCGAGGCGCCTCTCAACCGGGGCGGAGACGAC +
Preference number: 6 (lower is better)
Translates to: SSLRKRGGGSLR*AEAPLNRGGDD
Trigger: GTCGTCTCCGCCCCGGTTGAGAGGCGCCTCGGCGCATCGGAGGGACCCTCCCCCGCGCTTCCTCAGGCTGCT
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000519342.1
CDS GCA 72 bp TCCCGAACTCCTCCTCCGCAGTTGTGGCTCGACGGCTaGTCCCGGGAACCAGCGCCGCAACTACCACCTCCC +
Preference number: 6 (lower is better)
Translates to: SRTPPPQLWLDG*SREPAPQLPPP
Trigger: GGGAGGTGGTAGTTGCGGCGCTGGTTCCCGGGAGCAGCCGTCGAGCCACAACTGCGGAGGAGGAGTTCGGGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519342.1
CDS GCA 72 bp AGCACGGCTTGCGGGGCGATGTCCCGGCTCCAAATTTaGAGCGAGGCCCGGAAATCGGTCCCGTTAGAGCCG +
Preference number: 6 (lower is better)
Translates to: STACGAMSRLQI*SEARKSVPLEP
Trigger: CGGCTCTAACGGGACCGATTTCCGGGCCTCGCTGCAAATTTGGAGCCGGGACATCGCCCCGCAAGCCGTGCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523167.1
CDS GCA 72 bp GACTCCCCGTTATACTGGCTCCAGCTAGTGCCATGGTaGTGGCCGTTTCACTCAGGTTGTCTCGGATGGCTC +
Preference number: 6 (lower is better)
Translates to: DSPLYWLQLVPW*WPFHSGCLGWL
Trigger: GAGCCATCCGAGACAACCTGAGTGAAACGGCCAGCACCATGGCACTAGCTGGAGCCAGTATAACGGGGAGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341084.7
ENST00000519449.5
ENST00000523255.5
CDS CAA 90 bp AGCTGGGCCGTGCTCCCACTGGGGCTTGAGGGGAGAATGTGTCCTTaGACTCTTCCAGCTTCTGGTGACTATAAGCATTCCTCGGCTTGC +
Preference number: 6 (lower is better)
Translates to: SWAVLPLGLEGRMCP*TLPASGDYKHSSAC
Trigger: GCAAGCCGAGGAATGCTTATAGTCACCAGAAGCTGGAAGAGTCAAAGGACACATTCTCCCCTCAAGCCCCAGTGGGAGCACGGCCCAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000519342.1
ENST00000522182.1
ENST00000523481.5
CDS GCA 72 bp CACTGGATGAACCGCCAGCATGACTTCGGGTGGCACTaGCATCATCCACACTACTGCTTCCACTGTTGTGCC +
Preference number: 6 (lower is better)
Translates to: HWMNRQHDFGWH*HHPHYCFHCCA
Trigger: GGCACAACAGTGGAAGCAGTAGTGTGGATGATGGCAGTGCCACCCGAAGTCATGCTGGCGGTTCATCCAGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341084.7
ENST00000519449.5
ENST00000520903.1
ENST00000523255.5
CDS GCA 72 bp GGATTCATGAGCAGAAGCTGTGGGGTAGCGAAGAAATaGAGGGCATGGGTCCCACACTCAAATGCCCTCGGC +
Preference number: 6 (lower is better)
Translates to: GFMSRSCGVAKK*RAWVPHSNALG
Trigger: GCCGAGGGCATTTGAGTGTGGGACCCATGCCCTGCATTTCTTCGCTACCCCACAGCTTCTGCTCATGAATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519527.5
ENST00000522182.1
ENST00000522369.5
CDS CCA 72 bp TCCCCGTTATACTGGCTCCAGCTAGTGCCATGGTGCTaGCCGTTTCACTCAGGTTGTCTCGGATGGCTCCTA +
Preference number: 6 (lower is better)
Translates to: SPLYWLQLVPWC*PFHSGCLGWLL
Trigger: TAGGAGCCATCCGAGACAACCTGAGTGAAACGGCCAGCACCATGGCACTAGCTGGAGCCAGTATAACGGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341084.7
ENST00000519449.5
ENST00000523255.5
CDS CCA 72 bp ACAGACTCCCCGTTATACTGGCTCCAGCTAGTGCCATaGTGCTGGCCGTTTCACTCAGGTTGTCTCGGATGG +
Preference number: 6 (lower is better)
Translates to: TDSPLYWLQLVP*CWPFHSGCLGW
Trigger: CCATCCGAGACAACCTGAGTGAAACGGCCAGCACCATGGCACTAGCTGGAGCCAGTATAACGGGGAGTCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341084.7
ENST00000519449.5
ENST00000523255.5
CDS CCA 72 bp GCAAGCCACTGGATGAACCGCCAGCATGACTTCGGGTaGCACTGCCATCATCCACACTACTGCTTCCACTGT +
Preference number: 6 (lower is better)
Translates to: ASHWMNRQHDFG*HCHHPHYCFHC
Trigger: ACAGTGGAAGCAGTAGTGTGGATGATGGCAGTGCCACCCGAAGTCATGCTGGCGGTTCATCCAGTGGCTTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341084.7
ENST00000519449.5
ENST00000520903.1
ENST00000523255.5
CDS CCA 72 bp AGCAGAAGCTGTGGGGTAGCGAAGAAATGCAGGGCATaGGTCCCACACTCAAATGCCCTCGGCAGTAGACAG +
Preference number: 6 (lower is better)
Translates to: SRSCGVAKKCRA*VPHSNALGSRQ
Trigger: CTGTCTACTGCCGAGGGCATTTGAGTGTGGGACCCATGCCCTGCATTTCTTCGCTACCCCACAGCTTCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519527.5
ENST00000522182.1
ENST00000522369.5
CDS TCA 72 bp TTACCTTCAGGCAAGCCACTGGATGAACCGCCAGCATaGCTTCGGGTGGCACTGCCATCATCCACACTACTG +
Preference number: 6 (lower is better)
Translates to: LPSGKPLDEPPA*LRVALPSSTLL
Trigger: CAGTAGTGTGGATGATGGCAGTGCCACCCGAAGTCATGCTGGCGGTTCATCCAGTGGCTTGCCTGAAGGTAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341084.7
ENST00000519449.5
ENST00000520903.1
ENST00000523255.5
CDS CCA 72 bp CCATGGTGCTGGCCGTTTCACTCAGGTTGTCTCGGATaGCTCCTATTCGATCCATGTGGCTTCCACTTGCAC +
Preference number: 6 (lower is better)
Translates to: PWCWPFHSGCLG*LLFDPCGFHLH
Trigger: GTGCAAGTGGAAGCCACATGGATCGAATAGGAGCCATCCGAGACAACCTGAGTGAAACGGCCAGCACCATGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341084.7
ENST00000519449.5
ENST00000523255.5
CDS CAA 72 bp CCAGCTAGTGCCATGGTGCTGGCCGTTTCACTCAGGTaGTCTCGGATGGCTCCTATTCGATCCATGTGGCTT +
Preference number: 6 (lower is better)
Translates to: PASAMVLAVSLR*SRMAPIRSMWL
Trigger: AAGCCACATGGATCGAATAGGAGCCATCCGAGACAACCTGAGTGAAACGGCCAGCACCATGGCACTAGCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341084.7
ENST00000519449.5
ENST00000523255.5
CDS CAA 90 bp TCAGGTTGTCTCGGATGGCTCCTATTCGATCCATGTGGCTTCCACTaGCACTCAAACTGCCAGTCAGCCCACCAACACTTCCCTCCCCTA +
Preference number: 6 (lower is better)
Translates to: SGCLGWLLFDPCGFH*HSNCQSAHQHFPPL
Trigger: TAGGGGAGGGAAGTGTTGGTGGGCTGACTGGCAGTTTGAGTGCAAGTGGAAGCCACATGGATCGAATAGGAGCCATCCGAGACAACCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341084.7
ENST00000519449.5
ENST00000523255.5
CDS CAA 90 bp ATACTGGCTCCAGCTAGTGCCATGGTGCTGGCCGTTTCACTCAGGTaGTCTCGGATGGCTCCTATTCGATCCATGTGGCTTCCACTTGCA +
Preference number: 6 (lower is better)
Translates to: ILAPASAMVLAVSLR*SRMAPIRSMWLPLA
Trigger: TGCAAGTGGAAGCCACATGGATCGAATAGGAGCCATCCGAGACAACCTGAGTGAAACGGCCAGCACCATGGCACTAGCTGGAGCCAGTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341084.7
ENST00000519449.5
ENST00000523255.5
CDS GCA 72 bp CTATTCGATCCATGTGGCTTCCACTTGCACTCAAACTaGCAGTCAGCCCACCAACACTTCCCTCCCCTATGC +
Preference number: 6 (lower is better)
Translates to: LFDPCGFHLHSN*QSAHQHFPPLC
Trigger: GCATAGGGGAGGGAAGTGTTGGTGGGCTGACTGGCAGTTTGAGTGCAAGTGGAAGCCACATGGATCGAATAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341084.7
ENST00000519449.5
ENST00000523255.5
CDS GCA 72 bp TCGGATGGCTCCTATTCGATCCATGTGGCTTCCACTTaGACTCAAACTGCCAGTCAGCCCACCAACACTTCC +
Preference number: 6 (lower is better)
Translates to: SDGSYSIHVAST*TQTASQPTNTS
Trigger: GGAAGTGTTGGTGGGCTGACTGGCAGTTTGAGTGCAAGTGGAAGCCACATGGATCGAATAGGAGCCATCCGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341084.7
ENST00000519449.5
ENST00000523255.5
CDS CAA 72 bp CTCGGATGGCTCCTATTCGATCCATGTGGCTTCCACTaGCACTCAAACTGCCAGTCAGCCCACCAACACTTC +
Preference number: 6 (lower is better)
Translates to: LGWLLFDPCGFH*HSNCQSAHQHF
Trigger: GAAGTGTTGGTGGGCTGACTGGCAGTTTGAGTGCAAGTGGAAGCCACATGGATCGAATAGGAGCCATCCGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341084.7
ENST00000519449.5
ENST00000523255.5
CDS GCA 72 bp AACTGCCAGTCAGCCCACCAACACTTCCCTCCCCTATaGTTGGGTTGTGTCTTGCTTCTGCTACTGATGTTG +
Preference number: 6 (lower is better)
Translates to: NCQSAHQHFPPL*LGCVLLLLLML
Trigger: CAACATCAGTAGCAGAAGCAAGACACAACCCAAGCATAGGGGAGGGAAGTGTTGGTGGGCTGACTGGCAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341084.7
ENST00000519449.5
ENST00000523255.5
CDS CAA 90 bp CACTCAAACTGCCAGTCAGCCCACCAACACTTCCCTCCCCTATGCTaGGGTTGTGTCTTGCTTCTGCTACTGATGTTGTGTCTACAGCTG +
Preference number: 6 (lower is better)
Translates to: HSNCQSAHQHFPPLC*GCVLLLLLMLCLQL
Trigger: CAGCTGTAGACACAACATCAGTAGCAGAAGCAAGACACAACCCAAGCATAGGGGAGGGAAGTGTTGGTGGGCTGACTGGCAGTTTGAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341084.7
ENST00000519449.5
CDS CAA 90 bp GTAATGGGTCTACTTGTCCCTTACAAAGACACTTGTCACTTGATTTaGAGGCTACCTTTAACTCCTCAGAGCGGCGGCAGCGCAGGGTGG +
Preference number: 6 (lower is better)
Translates to: VMGLLVPYKDTCHLI*RLPLTPQSGGSAGW
Trigger: CCACCCTGCGCTGCCGCCGCTCTGAGGAGTTAAAGGTAGCCTCAAAATCAAGTGACAAGTGTCTTTGTAAGGGACAAGTAGACCCATTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523481.5
CDS CAA 90 bp CAGTCAGCCCACCAACACTTCCCTCCCCTATGCTTGGGTTGTGTCTaGCTTCTGCTACTGATGTTGTGTCTACAGTCACTGCAGCTACTA +
Preference number: 6 (lower is better)
Translates to: QSAHQHFPPLCLGCV*LLLLMLCLQSLQLL
Trigger: TAGTAGCTGCAGTGACTGTAGACACAACATCAGTAGCAGAAGCAAGACACAACCCAAGCATAGGGGAGGGAAGTGTTGGTGGGCTGACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523255.5
CDS CAA 90 bp AAACTGCCAGTCAGCCCACCAACACTTCCCTCCCCTATGCTTGGGTaGTGTCTTGCTTCTGCTACTGATGTTGTGTCTACAGTCACTGCA +
Preference number: 6 (lower is better)
Translates to: KLPVSPPTLPSPMLG*CLASATDVVSTVTA
Trigger: TGCAGTGACTGTAGACACAACATCAGTAGCAGAAGCAAGACACAACCCAAGCATAGGGGAGGGAAGTGTTGGTGGGCTGACTGGCAGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523255.5
CDS CAA 90 bp CACTCAAACTGCCAGTCAGCCCACCAACACTTCCCTCCCCTATGCTaGGGTTGTGTCTTGCTTCTGCTACTGATGTTGTGTCTACAGTCA +
Preference number: 6 (lower is better)
Translates to: HSNCQSAHQHFPPLC*GCVLLLLLMLCLQS
Trigger: TGACTGTAGACACAACATCAGTAGCAGAAGCAAGACACAACCCAAGCATAGGGGAGGGAAGTGTTGGTGGGCTGACTGGCAGTTTGAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523255.5
CDS CAA 72 bp GTCAGCCCACCAACACTTCCCTCCCCTATGCTTGGGTaGTGTCTTGCTTCTGCTACTGATGTTGTGTCTACA +
Preference number: 6 (lower is better)
Translates to: VSPPTLPSPMLG*CLASATDVVST
Trigger: TGTAGACACAACATCAGTAGCAGAAGCAAGACACAACCCAAGCATAGGGGAGGGAAGTGTTGGTGGGCTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341084.7
ENST00000519449.5
ENST00000523255.5
CDS CAA 90 bp AAACTGCCAGTCAGCCCACCAACACTTCCCTCCCCTATGCTTGGGTaGTGTCTTGCTTCTGCTACTGATGTTGTGTCTACAGCTGTGTTA +
Preference number: 6 (lower is better)
Translates to: KLPVSPPTLPSPMLG*CLASATDVVSTAVL
Trigger: TAACACAGCTGTAGACACAACATCAGTAGCAGAAGCAAGACACAACCCAAGCATAGGGGAGGGAAGTGTTGGTGGGCTGACTGGCAGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341084.7
ENST00000519449.5
CDS CCA 72 bp AGGAACACCGATACCTACAGTCACTGCAGCTACTACTaGAGACACGATTACAGACAACGTTACACCACCTGC +
Preference number: 6 (lower is better)
Translates to: RNTDTYSHCSYY*RHDYRQRYTTC
Trigger: GCAGGTGGTGTAACGTTGTCTGTAATCGTGTCTCCAGTAGTAGCTGCAGTGACTGTAGGTATCGGTGTTCCT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341084.7
ENST00000519449.5
CDS CAA 72 bp CACCAACACTTCCCTCCCCTATGCTTGGGTTGTGTCTaGCTTCTGCTACTGATGTTGTGTCTACAGCTGTGT +
Preference number: 6 (lower is better)
Translates to: HQHFPPLCLGCV*LLLLMLCLQLC
Trigger: ACACAGCTGTAGACACAACATCAGTAGCAGAAGCAAGACACAACCCAAGCATAGGGGAGGGAAGTGTTGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341084.7
ENST00000519449.5
CDS CAA 72 bp CACCAACACTTCCCTCCCCTATGCTTGGGTTGTGTCTaGCTTCTGCTACTGATGTTGTGTCTACAGTCACTG +
Preference number: 6 (lower is better)
Translates to: HQHFPPLCLGCV*LLLLMLCLQSL
Trigger: CAGTGACTGTAGACACAACATCAGTAGCAGAAGCAAGACACAACCCAAGCATAGGGGAGGGAAGTGTTGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523255.5
CDS TCA 72 bp GACTGCTATCATGGATGTTCTGTAGTCCTAGCACTTTaGGAAGCAGAGGTGGTTGGATCACTTGAGTCCAGG +
Preference number: 6 (lower is better)
Translates to: DCYHGCSVVLAL*EAEVVGSLESR
Trigger: CCTGGACTCAAGTGATCCAACCACCTCTGCTTCTCAAAGTGCTAGGACTACAGAACATCCATGATAGCAGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519527.5
CDS CCA 72 bp TCCAAATGCTATCACAGCATATCCACAGTCTGGAGCTaGACACCACCTACAATCAGGATCTGCAACAAGCCA +
Preference number: 6 (lower is better)
Translates to: SKCYHSISTVWS*TPPTIRICNKP
Trigger: TGGCTTGTTGCAGATCCTGATTGTAGGTGGTGTCCAGCTCCAGACTGTGGATATGCTGTGATAGCATTTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341084.7
ENST00000519449.5
CDS CCA 72 bp CACAGCCCTCTCGCCCACAAGTTAATTTTGGACAGCTaGCACATCCAAATGCTATCACAGCATATCCACAGT +
Preference number: 6 (lower is better)
Translates to: HSPLAHKLILDS*HIQMLSQHIHS
Trigger: ACTGTGGATATGCTGTGATAGCATTTGGATGTGCCAGCTGTCCAAAATTAACTTGTGGGCGAGAGGGCTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341084.7
ENST00000519449.5
CDS CCA 72 bp ATGGATGAAGAACGTATAGTTCTCAAACGTAAGCTCTaGGCTCTCTCTTGTCGAGCAGCATCACAGGTCTGG +
Preference number: 6 (lower is better)
Translates to: MDEERIVLKRKL*ALSCRAASQVW
Trigger: CCAGACCTGTGATGCTGCTCGACAAGAGAGAGCCCAGAGCTTACGTTTGAGAACTATACGTTCTTCATCCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341084.7
ENST00000519449.5
CDS CAA 90 bp CAGACAACGTTACACCACCTGCTATGGCCAAATTCCGTTTGTGCTTaGAAACATCCTTGCCTTCATAGCGATTGTGAATCTTGCGGCCCA +
Preference number: 6 (lower is better)
Translates to: QTTLHHLLWPNSVCA*KHPCLHSDCESCGP
Trigger: TGGGCCGCAAGATTCACAATCGCTATGAAGGCAAGGATGTTTCAAAGCACAAACGGAATTTGGCCATAGCAGGTGGTGTAACGTTGTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341084.7
ENST00000519449.5
ENST00000523255.5
CDS CAA 90 bp TTCTCTGTAATGGGTCTACTTGTCCCTTACAAAGACACTTGTCACTaGATTTTGAGGCTACCTTTAACTCCTCAGAGCGGCGGCAGCGCA +
Preference number: 6 (lower is better)
Translates to: FSVMGLLVPYKDTCH*ILRLPLTPQSGGSA
Trigger: TGCGCTGCCGCCGCTCTGAGGAGTTAAAGGTAGCCTCAAAATCAAGTGACAAGTGTCTTTGTAAGGGACAAGTAGACCCATTACAGAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523481.5
CDS CAA 90 bp CGTCGTCTTCTCTGTAATGGGTCTACTTGTCCCTTACAAAGACACTaGTCACTTGATTTTGAGGCTACCTTTAACTCCTCAGAGCGGCGG +
Preference number: 6 (lower is better)
Translates to: RRLLCNGSTCPLQRH*SLDFEATFNSSERR
Trigger: CCGCCGCTCTGAGGAGTTAAAGGTAGCCTCAAAATCAAGTGACAAGTGTCTTTGTAAGGGACAAGTAGACCCATTACAGAGAAGACGACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523481.5
CDS CAA 90 bp GCACTGCCATCATCCACACTACTGCTTCCACTGTTGTGCCTGAATTaGGATGGCTTTGACTCAATATCTACTTGCACCTCCATACTGTTG +
Preference number: 6 (lower is better)
Translates to: ALPSSTLLLPLLCLN*DGFDSISTCTSILL
Trigger: CAACAGTATGGAGGTGCAAGTAGATATTGAGTCAAAGCCATCCAAATTCAGGCACAACAGTGGAAGCAGTAGTGTGGATGATGGCAGTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341084.7
ENST00000519449.5
ENST00000520903.1
ENST00000523255.5
CDS TCA 72 bp ACTGCTTCCACTGTTGTGCCTGAATTTGGATGGCTTTaGCTCAATATCTACTTGCACCTCCATACTGTTGCC +
Preference number: 6 (lower is better)
Translates to: TASTVVPEFGWL*LNIYLHLHTVA
Trigger: GGCAACAGTATGGAGGTGCAAGTAGATATTGAGTCAAAGCCATCCAAATTCAGGCACAACAGTGGAAGCAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341084.7
ENST00000519449.5
ENST00000520903.1
ENST00000523255.5
ENST00000523644.1
CDS CAA 72 bp TCATCCACACTACTGCTTCCACTGTTGTGCCTGAATTaGGATGGCTTTGACTCAATATCTACTTGCACCTCC +
Preference number: 6 (lower is better)
Translates to: SSTLLLPLLCLN*DGFDSISTCTS
Trigger: GGAGGTGCAAGTAGATATTGAGTCAAAGCCATCCAAATTCAGGCACAACAGTGGAAGCAGTAGTGTGGATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341084.7
ENST00000519449.5
ENST00000520903.1
ENST00000523255.5
CDS CAA 72 bp GAGTCATACAGAGAAAAGCGCCAGGGTTCTGAAGAGTaGGCTGGAACATTTGCCAAAAGTAGATTTACCCAG +
Preference number: 6 (lower is better)
Translates to: ESYREKRQGSEE*AGTFAKSRFTQ
Trigger: CTGGGTAAATCTACTTTTGGCAAATGTTCCAGCCAACTCTTCAGAACCCTGGCGCTTTTCTCTGTATGACTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520071.1
CDS GCA 72 bp CAATGGGATGTAGGAATTCAGAATGGATCCTGCCATTaGTTTGGTGCTGGCATTATCACTAACTGTTCCCAA +
Preference number: 6 (lower is better)
Translates to: QWDVGIQNGSCH*FGAGIITNCSQ
Trigger: TTGGGAACAGTTAGTGATAATGCCAGCACCAAAGCAATGGCAGGATCCATTCTGAATTCCTACATCCCATTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341084.7
ENST00000519449.5
ENST00000520903.1
ENST00000523255.5
ENST00000523644.1
CDS CCA 72 bp AGTCATACAGAGAAAAGCGCCAGGGTTCTGAAGAGTTaGCTGGAACATTTGCCAAAAGTAGATTTACCCAGT +
Preference number: 6 (lower is better)
Translates to: SHTEKSARVLKS*LEHLPKVDLPS
Trigger: ACTGGGTAAATCTACTTTTGGCAAATGTTCCAGCCAACTCTTCAGAACCCTGGCGCTTTTCTCTGTATGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520071.1
CDS CAA 90 bp CGTCGTCTTCTCTGTAATGGGTCTACTTGTCCCTTACAAAGACACTaGTCACTTGATTTTGAGGCTACCAGAGTAACAGAAACCAAAGAG +
Preference number: 6 (lower is better)
Translates to: RRLLCNGSTCPLQRH*SLDFEATRVTETKE
Trigger: CTCTTTGGTTTCTGTTACTCTGGTAGCCTCAAAATCAAGTGACAAGTGTCTTTGTAAGGGACAAGTAGACCCATTACAGAGAAGACGACG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522182.1
CDS CAA 72 bp TTACACCACCTGCTATGGCCAAATTCCGTTTGTGCTTaGAAACATCCTTGCCTTCATAGCGATTGTGAATCT +
Preference number: 6 (lower is better)
Translates to: LHHLLWPNSVCA*KHPCLHSDCES
Trigger: AGATTCACAATCGCTATGAAGGCAAGGATGTTTCAAAGCACAAACGGAATTTGGCCATAGCAGGTGGTGTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341084.7
ENST00000519449.5
ENST00000523255.5
CDS GCA 72 bp ACAACTAAATTCAGAAAAATGACTAGAGTGAGAATCTaGTACAGAAGGCATACTGTCACTGAGGGATGGAGC +
Preference number: 6 (lower is better)
Translates to: TTKFRKMTRVRI*YRRHTVTEGWS
Trigger: GCTCCATCCCTCAGTGACAGTATGCCTTCTGTAGCAGATTCTCACTCTAGTCATTTTTCTGAATTTAGTTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341084.7
ENST00000519449.5
CDS CAA 72 bp CTCTGTAATGGGTCTACTTGTCCCTTACAAAGACACTaGTCACTTGATTTTGAGGCTACCAGAGTAACAGAA +
Preference number: 6 (lower is better)
Translates to: LCNGSTCPLQRH*SLDFEATRVTE
Trigger: TTCTGTTACTCTGGTAGCCTCAAAATCAAGTGACAAGTGTCTTTGTAAGGGACAAGTAGACCCATTACAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522182.1
CDS CCA 72 bp ATTCATCTTTATTATATAAGCAGCACATCGTGGACATaGCTTTATATCATCAGCTGCTGCTCCAGACTCTTG +
Preference number: 6 (lower is better)
Translates to: IHLYYISSTSWT*LYIISCCSRLL
Trigger: CAAGAGTCTGGAGCAGCAGCTGATGATATAAAGCCATGTCCACGATGTGCTGCTTATATAATAAAGATGAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341084.7
ENST00000519449.5
ENST00000524233.1
CDS CCA 72 bp TTCTTGAAAAGTTCGATTTACAGAAGACTGCTATCATaGATGTTAGTTCTGGAGGCCAGAAGTCCAAAATCC +
Preference number: 6 (lower is better)
Translates to: FLKSSIYRRLLS*MLVLEARSPKS
Trigger: GGATTTTGGACTTCTGGCCTCCAGAACTAACATCCATGATAGCAGTCTTCTGTAAATCGAACTTTTCAAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000432381.2
ENST00000517584.5
CDS CCA 72 bp TTCTTGAAAAGTTCGATTTACAGAAGACTGCTATCATaGATGTTCTGTAGTCCTAGCACTTTGAGAAGCAGA +
Preference number: 6 (lower is better)
Translates to: FLKSSIYRRLLS*MFCSPSTLRSR
Trigger: TCTGCTTCTCAAAGTGCTAGGACTACAGAACATCCATGATAGCAGTCTTCTGTAAATCGAACTTTTCAAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519527.5
CDS CCA 72 bp ATCAAGACATCATCACTTAATATCAAGCGAATATCATaGGGATTAAACCGTTCAGTACATTCTGGGCAACTA +
Preference number: 6 (lower is better)
Translates to: IKTSSLNIKRIS*GLNRSVHSGQL
Trigger: TAGTTGCCCAGAATGTACTGAACGGTTTAATCCCCATGATATTCGCTTGATATTAAGTGATGATGTCTTGAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341084.7
ENST00000519449.5
CDS CCA 72 bp TTCTTGAAAAGTTCGATTTACAGAAGACTGCTATCATaGATGTTCAGAGTAACAGAAACCAAAGAGGCTGTA +
Preference number: 6 (lower is better)
Translates to: FLKSSIYRRLLS*MFRVTETKEAV
Trigger: TACAGCCTCTTTGGTTTCTGTTACTCTGAACATCCATGATAGCAGTCTTCTGTAAATCGAACTTTTCAAGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522369.5
CDS CAA 72 bp TTCTGCAGCATTTATGGGCCTAAATTTCAGTCTGAATaGCAACTTTTAATTCCATTGTCTGATGTGAGTGGT +
Preference number: 6 (lower is better)
Translates to: FCSIYGPKFQSE*QLLIPLSDVSG
Trigger: ACCACTCACATCAGACAATGGAATTAAAAGTTGCAATTCAGACTGAAATTTAGGCCCATAAATGCTGCAGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341084.7
ENST00000519449.5
CDS CAA 90 bp CACTCTATGAAGTCTCCAATTTGTTTGCTGATGGAAGTTAATCCATaGTCAGAAGAGGTATTTGTAGAGAAAATGGAGTTCTTATCAGTA +
Preference number: 6 (lower is better)
Translates to: HSMKSPICLLMEVNP*SEEVFVEKMEFLSV
Trigger: TACTGATAAGAACTCCATTTTCTCTACAAATACCTCTTCTGACAATGGATTAACTTCCATCAGCAAACAAATTGGAGACTTCATAGAGTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341084.7
ENST00000519449.5
ENST00000519527.5
ENST00000523167.1
CDS TCA 72 bp GTAAGAATATCCTACTTGGTTCCTTCAGAGAATTCTTaGAAAGTTCGATTTACAGAAGACTGCTATCATGGA +
Preference number: 6 (lower is better)
Translates to: VRISYLVPSENS*KVRFTEDCYHG
Trigger: TCCATGATAGCAGTCTTCTGTAAATCGAACTTTTCAAGAATTCTCTGAAGGAACCAAGTAGGATATTCTTAC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341084.7
ENST00000432381.2
ENST00000519449.5
ENST00000519527.5
ENST00000522369.5
ENST00000523167.1
ENST00000523481.5
CDS TCA 72 bp GGTTTTATTCCATTGTTACCATGTTCTTCAGCAATATaGTTCAACTGTGAAACTTCTGAACAGGAAGCAGTT +
Preference number: 6 (lower is better)
Translates to: GFIPLLPCSSAI*FNCETSEQEAV
Trigger: AACTGCTTCCTGTTCAGAAGTTTCACAGTTGAATCATATTGCTGAAGAACATGGTAACAATGGAATAAAACC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341084.7
ENST00000519449.5
CDS TCA 72 bp ACTAACAATTTACCAACTACTTTAAGGCTAGGCTCTTaGATCTGTAATACTTTCAACCAAGACTTACTGCAG +
Preference number: 6 (lower is better)
Translates to: TNNLPTTLRLGS*ICNTFNQDLLQ
Trigger: CTGCAGTAAGTCTTGGTTGAAAGTATTACAGATTCAAGAGCCTAGCCTTAAAGTAGTTGGTAAATTGTTAGT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520071.1
CDS CAA 72 bp TGTAAGAATATCCTACTTGGTTCCTTCAGAGAATTCTaGAAAAGTTCGATTTACAGAAGACTGCTATCATGG +
Preference number: 6 (lower is better)
Translates to: CKNILLGSFREF*KSSIYRRLLSW
Trigger: CCATGATAGCAGTCTTCTGTAAATCGAACTTTTCAAGAATTCTCTGAAGGAACCAAGTAGGATATTCTTACA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341084.7
ENST00000432381.2
ENST00000519449.5
ENST00000519527.5
ENST00000522369.5
ENST00000523167.1
ENST00000523481.5
CDS CAA 72 bp AAGTCTCCAATTTGTTTGCTGATGGAAGTTAATCCATaGTCAGAAGAGGTATTTGTAGAGAAAATGGAGTTC +
Preference number: 6 (lower is better)
Translates to: KSPICLLMEVNP*SEEVFVEKMEF
Trigger: GAACTCCATTTTCTCTACAAATACCTCTTCTGACAATGGATTAACTTCCATCAGCAAACAAATTGGAGACTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341084.7
ENST00000519449.5
ENST00000519527.5
ENST00000523167.1