Pregenerated sensors for RNF185 (Homo sapiens)
Ensembl gene IDs: ENSG00000138942Ensembl transcript IDs: ENST00000266252.8, ENST00000326132.11, ENST00000426256.6, ENST00000468921.5, ENST00000494514.5, ENST00000518626.5
Found 47 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | CCATCTCCCTCCAGCTTTGGGGTCTCCAGAAAGAGGCTGGATTTCTGGGATGAATGTCCCAGGGACAGCTaGAGGAGGCCGCCCATCATT | + |
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Preference number: 2 (lower is better) Translates to: PSPSSFGVSRKRLDFWDECPRDS*RRPPII Trigger: AATGATGGGCGGCCTCCTCCAGCTGTCCCTGGGACA...TTCATCCCAGAAATCCAGCCTCTTTCTGGAGACCCCAAAGCTGGAGGGAGATGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000426256.6 |
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| 3UTR-3UTR TCA 90 bp | CCATCTCCCTCCAGCTTTGGGGTCTCCAGAAAGAGGCTGGATTTCTGGGATGAAAACTGTTCCACCAGGTaGACAGTCCTACCTGCTTGG | + |
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Preference number: 2 (lower is better) Translates to: PSPSSFGVSRKRLDFWDENCSTR*TVLPAW Trigger: CCAAGCAGGTAGGACTGTTCACCTGGTGGAACAGTT...TTCATCCCAGAAATCCAGCCTCTTTCTGGAGACCCCAAAGCTGGAGGGAGATGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000266252.8 ENST00000326132.11 ENST00000426256.6 ENST00000518626.5 |
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| 3UTR-3UTR CCA 90 bp | CCATCTCCCTCCAGCTTTGGGGTCTCCAGAAAGAGGCTGGATTTCTGGGATGAAAGAACAGAGCGGCACTaGGATTTGAAAGGGGAACCT | + |
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Preference number: 2 (lower is better) Translates to: PSPSSFGVSRKRLDFWDERTERH*DLKGEP Trigger: AGGTTCCCCTTTCAAATCCCAGTGCCGCTCTGTTCT...TTCATCCCAGAAATCCAGCCTCTTTCTGGAGACCCCAAAGCTGGAGGGAGATGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000266252.8 ENST00000326132.11 ENST00000426256.6 |
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| 3UTR-3UTR TCA 90 bp | CCATCTCCCTCCAGCTTTGGGGTCTCCAGAAAGAGGCTGGATTTCTGGGATGAACCAAATCCAAATCCTTaGAATCCCCTCTGGATTGGT | + |
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Preference number: 2 (lower is better) Translates to: PSPSSFGVSRKRLDFWDEPNPNP*NPLWIG Trigger: ACCAATCCAGAGGGGATTTCAAGGATTTGGATTTGG...TTCATCCCAGAAATCCAGCCTCTTTCTGGAGACCCCAAAGCTGGAGGGAGATGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000426256.6 |
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| 3UTR-3UTR GCA 90 bp | CCATCTCCCTCCAGCTTTGGGGTCTCCAGAAAGAGGCTGGATTTCTGGGATGAAGGGACAGCAATTTCTTaGATCTCTACAGAGGAAGAA | + |
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Preference number: 2 (lower is better) Translates to: PSPSSFGVSRKRLDFWDEGTAIS*ISTEEE Trigger: TTCTTCCTCTGTAGAGATGCAAGAAATTGCTGTCCC...TTCATCCCAGAAATCCAGCCTCTTTCTGGAGACCCCAAAGCTGGAGGGAGATGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000266252.8 ENST00000326132.11 ENST00000426256.6 |
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| 3UTR-3UTR CCA 90 bp | CCATCTCCCTCCAGCTTTGGGGTCTCCAGAAAGAGGCTGGATTTCTGGGATGAACTGTATGTTCTCATTTaGTGCATCCCTTTGTTTCTG | + |
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Preference number: 2 (lower is better) Translates to: PSPSSFGVSRKRLDFWDELYVLI*CIPLFL Trigger: CAGAAACAAAGGGATGCACCAAATGAGAACATACAG...TTCATCCCAGAAATCCAGCCTCTTTCTGGAGACCCCAAAGCTGGAGGGAGATGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000518626.5 |
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| 3UTR-3UTR CAA 90 bp | CCATCTCCCTCCAGCTTTGGGGTCTCCAGAAAGAGGCTGGATTTCTGGGATGAATCCAAATCCAAATCCTaGAAATCCCCTCTGGATTGG | + |
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Preference number: 3 (lower is better) Translates to: PSPSSFGVSRKRLDFWDESKSKS*KSPLDW Trigger: CCAATCCAGAGGGGATTTCAAGGATTTGGATTTGGA...TTCATCCCAGAAATCCAGCCTCTTTCTGGAGACCCCAAAGCTGGAGGGAGATGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000426256.6 |
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| 3UTR-3UTR CAA 90 bp | CCATCTCCCTCCAGCTTTGGGGTCTCCAGAAAGAGGCTGGATTTCTGGGATGAAGCTGTATGTTCTCATTaGGTGCATCCCTTTGTTTCT | + |
|
Preference number: 3 (lower is better) Translates to: PSPSSFGVSRKRLDFWDEAVCSH*VHPFVS Trigger: AGAAACAAAGGGATGCACCAAATGAGAACATACAGC...TTCATCCCAGAAATCCAGCCTCTTTCTGGAGACCCCAAAGCTGGAGGGAGATGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000518626.5 |
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| CDS-3UTR GCA 90 bp | CCATCTCCCTCCAGCTTTGGGGTCTCCAGAAAGAGGCTGGATTTCTGGGATGAATCTCGCCAGCGCCATTaGTGCTCCCACTGGGCCCCC | + |
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Preference number: 4 (lower is better) Translates to: PSPSSFGVSRKRLDFWDESRQRH*CSHWAP Trigger: GGGGGCCCAGTGGGAGCAGCAATGGCGCTGGCGAGA...TTCATCCCAGAAATCCAGCCTCTTTCTGGAGACCCCAAAGCTGGAGGGAGATGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000266252.8 ENST00000326132.11 ENST00000426256.6 ENST00000518626.5 |
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| CDS-3UTR GCA 90 bp | CCATCTCCCTCCAGCTTTGGGGTCTCCAGAAAGAGGCTGGATTTCTGGGATGAACGAGGGCCCCTTGCTTaGCATCCTTGGCTGTCAGCG | + |
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Preference number: 4 (lower is better) Translates to: PSPSSFGVSRKRLDFWDERGPLA*HPWLSA Trigger: CGCTGACAGCCAAGGATGGCAAGCAAGGGGCCCTCG...TTCATCCCAGAAATCCAGCCTCTTTCTGGAGACCCCAAAGCTGGAGGGAGATGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000266252.8 ENST00000326132.11 ENST00000426256.6 ENST00000518626.5 |
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| CDS-3UTR GCA 90 bp | CCATCTCCCTCCAGCTTTGGGGTCTCCAGAAAGAGGCTGGATTTCTGGGATGAAAGGCCGAGGGCCCCTTaGTTGCCATCCTTGGCTGTC | + |
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Preference number: 4 (lower is better) Translates to: PSPSSFGVSRKRLDFWDERPRAP*LPSLAV Trigger: GACAGCCAAGGATGGCAAGCAAGGGGCCCTCGGCCT...TTCATCCCAGAAATCCAGCCTCTTTCTGGAGACCCCAAAGCTGGAGGGAGATGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000266252.8 ENST00000326132.11 ENST00000426256.6 ENST00000518626.5 |
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| CDS-3UTR GCA 90 bp | CCATCTCCCTCCAGCTTTGGGGTCTCCAGAAAGAGGCTGGATTTCTGGGATGAATCGAAAGTGCTGTCCTaGCCTCCGCTCTCGCCAGCG | + |
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Preference number: 4 (lower is better) Translates to: PSPSSFGVSRKRLDFWDESKVLS*PPLSPA Trigger: CGCTGGCGAGAGCGGAGGGCAGGACAGCACTTTCGA...TTCATCCCAGAAATCCAGCCTCTTTCTGGAGACCCCAAAGCTGGAGGGAGATGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000266252.8 ENST00000326132.11 ENST00000426256.6 ENST00000518626.5 |
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| CDS-3UTR GCA 90 bp | CCATCTCCCTCCAGCTTTGGGGTCTCCAGAAAGAGGCTGGATTTCTGGGATGAAGGAGTTCTCAGGAGATaGAGAGGCCGAGGGCCCCTT | + |
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Preference number: 4 (lower is better) Translates to: PSPSSFGVSRKRLDFWDEGVLRR*RGRGPL Trigger: AAGGGGCCCTCGGCCTCTGCATCTCCTGAGAACTCC...TTCATCCCAGAAATCCAGCCTCTTTCTGGAGACCCCAAAGCTGGAGGGAGATGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000266252.8 ENST00000326132.11 ENST00000426256.6 ENST00000518626.5 |
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| CDS-3UTR CCA 90 bp | CCATCTCCCTCCAGCTTTGGGGTCTCCAGAAAGAGGCTGGATTTCTGGGATGAAGAGGGGTCTTCTCTCTaGGGTCCTGTTGCCCAGTGC | + |
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Preference number: 4 (lower is better) Translates to: PSPSSFGVSRKRLDFWDEEGSSL*GPVAQC Trigger: GCACTGGGCAACAGGACCCCAGAGAGAAGACCCCTC...TTCATCCCAGAAATCCAGCCTCTTTCTGGAGACCCCAAAGCTGGAGGGAGATGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000326132.11 ENST00000426256.6 ENST00000518626.5 |
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| CDS-3UTR GCA 90 bp | CCATCTCCCTCCAGCTTTGGGGTCTCCAGAAAGAGGCTGGATTTCTGGGATGAATCCCCAGGGAAATCCTaGCTCCGCACAGTTAACGCC | + |
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Preference number: 4 (lower is better) Translates to: PSPSSFGVSRKRLDFWDESPGKS*LRTVNA Trigger: GGCGTTAACTGTGCGGAGGCAGGATTTCCCTGGGGA...TTCATCCCAGAAATCCAGCCTCTTTCTGGAGACCCCAAAGCTGGAGGGAGATGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000266252.8 ENST00000326132.11 ENST00000426256.6 ENST00000518626.5 |
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| CDS-3UTR CCA 90 bp | CCATCTCCCTCCAGCTTTGGGGTCTCCAGAAAGAGGCTGGATTTCTGGGATGAAGGCCAACAGAAGAGGTaGCCACACAGGCTGATGACG | + |
|
Preference number: 4 (lower is better) Translates to: PSPSSFGVSRKRLDFWDEGQQKR*PHRLMT Trigger: CGTCATCAGCCTGTGTGGCCACCTCTTCTGTTGGCC...TTCATCCCAGAAATCCAGCCTCTTTCTGGAGACCCCAAAGCTGGAGGGAGATGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000266252.8 ENST00000326132.11 ENST00000426256.6 ENST00000518626.5 |
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| CDS-3UTR CCA 90 bp | CCATCTCCCTCCAGCTTTGGGGTCTCCAGAAAGAGGCTGGATTTCTGGGATGAAGCCGCGTCAATCTGTTaGGTAAGACCTCCGACCCCT | + |
|
Preference number: 4 (lower is better) Translates to: PSPSSFGVSRKRLDFWDEAASIC*VRPPTP Trigger: AGGGGTCGGAGGTCTTACCCAACAGATTGACGCGGC...TTCATCCCAGAAATCCAGCCTCTTTCTGGAGACCCCAAAGCTGGAGGGAGATGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000326132.11 |
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| CDS-3UTR TCA 90 bp | CCATCTCCCTCCAGCTTTGGGGTCTCCAGAAAGAGGCTGGATTTCTGGGATGAACTGTCAGCGAAGCTCTaGGTGAAGACTTTCCCCAGG | + |
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Preference number: 4 (lower is better) Translates to: PSPSSFGVSRKRLDFWDELSAKL*VKTFPR Trigger: CCTGGGGAAAGTCTTCACTCAGAGCTTCGCTGACAG...TTCATCCCAGAAATCCAGCCTCTTTCTGGAGACCCCAAAGCTGGAGGGAGATGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000266252.8 ENST00000326132.11 ENST00000426256.6 ENST00000518626.5 |
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| CDS-3UTR GCA 90 bp | CCATCTCCCTCCAGCTTTGGGGTCTCCAGAAAGAGGCTGGATTTCTGGGATGAATGTTGCACTCGAAAGTaGTGTCCTGCCCTCCGCTCT | + |
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Preference number: 4 (lower is better) Translates to: PSPSSFGVSRKRLDFWDECCTRK*CPALRS Trigger: AGAGCGGAGGGCAGGACAGCACTTTCGAGTGCAACA...TTCATCCCAGAAATCCAGCCTCTTTCTGGAGACCCCAAAGCTGGAGGGAGATGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000266252.8 ENST00000326132.11 ENST00000426256.6 ENST00000518626.5 |
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| CDS-3UTR CCA 90 bp | CCATCTCCCTCCAGCTTTGGGGTCTCCAGAAAGAGGCTGGATTTCTGGGATGAACAGGAGCAGTGTGGATaGCAAAGTAGGAGAGAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: PSPSSFGVSRKRLDFWDEQEQCG*QSRREA Trigger: GGCCTCTCTCCTACTTTGCCATCCACACTGCTCCTG...TTCATCCCAGAAATCCAGCCTCTTTCTGGAGACCCCAAAGCTGGAGGGAGATGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000266252.8 ENST00000326132.11 ENST00000426256.6 ENST00000518626.5 |
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| CDS-3UTR TCA 90 bp | CCATCTCCCTCCAGCTTTGGGGTCTCCAGAAAGAGGCTGGATTTCTGGGATGAACAGCGAAGCTCTGAGTaGAGACTTTCCCCAGGGAAA | + |
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Preference number: 4 (lower is better) Translates to: PSPSSFGVSRKRLDFWDEQRSSE*RLSPGK Trigger: TTTCCCTGGGGAAAGTCTTCACTCAGAGCTTCGCTG...TTCATCCCAGAAATCCAGCCTCTTTCTGGAGACCCCAAAGCTGGAGGGAGATGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000266252.8 ENST00000326132.11 ENST00000426256.6 ENST00000518626.5 |
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| CDS-3UTR TCA 90 bp | CCATCTCCCTCCAGCTTTGGGGTCTCCAGAAAGAGGCTGGATTTCTGGGATGAAGCTGGATTTCTGGGATaGAGCCTAGAAGGCAGAGCA | + |
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Preference number: 4 (lower is better) Translates to: PSPSSFGVSRKRLDFWDEAGFLG*SLEGRA Trigger: TGCTCTGCCTTCTAGGCTTCATCCCAGAAATCCAGC...TTCATCCCAGAAATCCAGCCTCTTTCTGGAGACCCCAAAGCTGGAGGGAGATGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000266252.8 ENST00000326132.11 ENST00000426256.6 ENST00000518626.5 |
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| CDS-3UTR GCA 90 bp | CCATCTCCCTCCAGCTTTGGGGTCTCCAGAAAGAGGCTGGATTTCTGGGATGAATGTCCAAGCAGATGTTaGACTCGAAAGTGCTGTCCT | + |
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Preference number: 4 (lower is better) Translates to: PSPSSFGVSRKRLDFWDECPSRC*TRKCCP Trigger: AGGACAGCACTTTCGAGTGCAACATCTGCTTGGACA...TTCATCCCAGAAATCCAGCCTCTTTCTGGAGACCCCAAAGCTGGAGGGAGATGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000266252.8 ENST00000326132.11 ENST00000426256.6 ENST00000518626.5 |
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| CDS-3UTR TCA 90 bp | CCATCTCCCTCCAGCTTTGGGGTCTCCAGAAAGAGGCTGGATTTCTGGGATGAACCAAATCCAAATCCTTaGAATCCCCCTCTATTCTCC | + |
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Preference number: 4 (lower is better) Translates to: PSPSSFGVSRKRLDFWDEPNPNP*NPPLFS Trigger: GGAGAATAGAGGGGGATTTCAAGGATTTGGATTTGG...TTCATCCCAGAAATCCAGCCTCTTTCTGGAGACCCCAAAGCTGGAGGGAGATGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000326132.11 ENST00000518626.5 |
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| CDS GCA 90 bp | TCCTTGGCTGTGTCCAAGCAGATGTTGCACTCGAAAGTGCTGTCCTaGCCTCCGCTCTCGCCAGCGCCATTGCTGCTCCCACTGGGCCCC | + |
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Preference number: 5 (lower is better) Translates to: SLAVSKQMLHSKVLS*PPLSPAPLLLPLGP Trigger: GGGGCCCAGTGGGAGCAGCAATGGCGCTGGCGAGAGCGGAGGGCAGGACAGCACTTTCGAGTGCAACATCTGCTTGGACACAGCCAAGGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000266252.8 ENST00000326132.11 ENST00000426256.6 ENST00000468921.5 ENST00000518626.5 |
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| CDS-3UTR CAA 90 bp | CCATCTCCCTCCAGCTTTGGGGTCTCCAGAAAGAGGCTGGATTTCTGGGATGAACTCTCGCCAGCGCCATaGCTGCTCCCACTGGGCCCC | + |
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Preference number: 5 (lower is better) Translates to: PSPSSFGVSRKRLDFWDELSPAP*LLPLGP Trigger: GGGGCCCAGTGGGAGCAGCAATGGCGCTGGCGAGAG...TTCATCCCAGAAATCCAGCCTCTTTCTGGAGACCCCAAAGCTGGAGGGAGATGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000266252.8 ENST00000326132.11 ENST00000426256.6 ENST00000518626.5 |
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| CDS TCA 90 bp | GAGGGCCCCTTGCTTGCCATCCTTGGCTGTCAGCGAAGCTCTGAGTaGAGACTTTCCCCAGGGAAATCCTGCCTCCGCACAGTTAACGCC | + |
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Preference number: 5 (lower is better) Translates to: EGPLLAILGCQRSSE*RLSPGKSCLRTVNA Trigger: GGCGTTAACTGTGCGGAGGCAGGATTTCCCTGGGGAAAGTCTTCACTCAGAGCTTCGCTGACAGCCAAGGATGGCAAGCAAGGGGCCCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000266252.8 ENST00000326132.11 ENST00000426256.6 ENST00000518626.5 |
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| CDS GCA 90 bp | CCCCTGCACTGGAGTTCTCAGGAGATGCAGAGGCCGAGGGCCCCTTaGTTGCCATCCTTGGCTGTCAGCGAAGCTCTGAGTGAAGACTTT | + |
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Preference number: 5 (lower is better) Translates to: PLHWSSQEMQRPRAP*LPSLAVSEALSEDF Trigger: AAAGTCTTCACTCAGAGCTTCGCTGACAGCCAAGGATGGCAAGCAAGGGGCCCTCGGCCTCTGCATCTCCTGAGAACTCCAGTGCAGGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000266252.8 ENST00000326132.11 ENST00000426256.6 ENST00000468921.5 ENST00000518626.5 |
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| CDS-3UTR CAA 90 bp | CCATCTCCCTCCAGCTTTGGGGTCTCCAGAAAGAGGCTGGATTTCTGGGATGAACCGAGGGCCCCTTGCTaGCCATCCTTGGCTGTCAGC | + |
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Preference number: 5 (lower is better) Translates to: PSPSSFGVSRKRLDFWDEPRAPC*PSLAVS Trigger: GCTGACAGCCAAGGATGGCAAGCAAGGGGCCCTCGG...TTCATCCCAGAAATCCAGCCTCTTTCTGGAGACCCCAAAGCTGGAGGGAGATGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000266252.8 ENST00000326132.11 ENST00000426256.6 ENST00000518626.5 |
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| CDS-3UTR CAA 90 bp | CCATCTCCCTCCAGCTTTGGGGTCTCCAGAAAGAGGCTGGATTTCTGGGATGAAGAGGCCGAGGGCCCCTaGCTTGCCATCCTTGGCTGT | + |
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Preference number: 5 (lower is better) Translates to: PSPSSFGVSRKRLDFWDEEAEGP*LAILGC Trigger: ACAGCCAAGGATGGCAAGCAAGGGGCCCTCGGCCTC...TTCATCCCAGAAATCCAGCCTCTTTCTGGAGACCCCAAAGCTGGAGGGAGATGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000266252.8 ENST00000326132.11 ENST00000426256.6 ENST00000518626.5 |
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| CDS-3UTR CAA 90 bp | CCATCTCCCTCCAGCTTTGGGGTCTCCAGAAAGAGGCTGGATTTCTGGGATGAACGCCGCGTCAATCTGTaGGGTAAGACCTCCGACCCC | + |
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Preference number: 5 (lower is better) Translates to: PSPSSFGVSRKRLDFWDERRVNL*GKTSDP Trigger: GGGGTCGGAGGTCTTACCCAACAGATTGACGCGGCG...TTCATCCCAGAAATCCAGCCTCTTTCTGGAGACCCCAAAGCTGGAGGGAGATGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000326132.11 |
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| CDS-3UTR CAA 90 bp | CCATCTCCCTCCAGCTTTGGGGTCTCCAGAAAGAGGCTGGATTTCTGGGATGAACCTTGCTTGCCATCCTaGGCTGTCAGCGAAGCTCTG | + |
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Preference number: 5 (lower is better) Translates to: PSPSSFGVSRKRLDFWDEPCLPS*AVSEAL Trigger: CAGAGCTTCGCTGACAGCCAAGGATGGCAAGCAAGG...TTCATCCCAGAAATCCAGCCTCTTTCTGGAGACCCCAAAGCTGGAGGGAGATGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000266252.8 ENST00000326132.11 ENST00000426256.6 ENST00000518626.5 |
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| CDS-3UTR CAA 90 bp | CCATCTCCCTCCAGCTTTGGGGTCTCCAGAAAGAGGCTGGATTTCTGGGATGAACATCTCCCTCCAGCTTaGGGGTCTCCAGAAAGAGGC | + |
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Preference number: 5 (lower is better) Translates to: PSPSSFGVSRKRLDFWDEHLPPA*GSPERG Trigger: GCCTCTTTCTGGAGACCCCAAAGCTGGAGGGAGATG...TTCATCCCAGAAATCCAGCCTCTTTCTGGAGACCCCAAAGCTGGAGGGAGATGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000266252.8 ENST00000326132.11 ENST00000426256.6 ENST00000518626.5 |
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| CDS TCA 90 bp | GAGGGCCCCTTGCTTGCCATCCTTGGCTGTCAGCGAAGCTCTGAGTaGAGACTTTCCCCAGGGAAATCCTGTAATCCCAGCTACTTGAGA | + |
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Preference number: 5 (lower is better) Translates to: EGPLLAILGCQRSSE*RLSPGKSCNPSYLR Trigger: TCTCAAGTAGCTGGGATTACAGGATTTCCCTGGGGAAAGTCTTCACTCAGAGCTTCGCTGACAGCCAAGGATGGCAAGCAAGGGGCCCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000468921.5 |
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| CDS-3UTR CAA 90 bp | CCATCTCCCTCCAGCTTTGGGGTCTCCAGAAAGAGGCTGGATTTCTGGGATGAACTGATGACGGCATCCTaGGCTGTGTCCAAGCAGATG | + |
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Preference number: 5 (lower is better) Translates to: PSPSSFGVSRKRLDFWDELMTAS*AVSKQM Trigger: CATCTGCTTGGACACAGCCAAGGATGCCGTCATCAG...TTCATCCCAGAAATCCAGCCTCTTTCTGGAGACCCCAAAGCTGGAGGGAGATGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000266252.8 ENST00000326132.11 ENST00000426256.6 ENST00000518626.5 |
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| CDS-3UTR CAA 90 bp | CCATCTCCCTCCAGCTTTGGGGTCTCCAGAAAGAGGCTGGATTTCTGGGATGAACGGCTGATGCCAGCTTaGCAAACAGGACACACCTGT | + |
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Preference number: 5 (lower is better) Translates to: PSPSSFGVSRKRLDFWDERLMPA*QTGHTC Trigger: ACAGGTGTGTCCTGTTTGCAAAGCTGGCATCAGCCG...TTCATCCCAGAAATCCAGCCTCTTTCTGGAGACCCCAAAGCTGGAGGGAGATGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000326132.11 ENST00000426256.6 ENST00000518626.5 |
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| CDS-3UTR CAA 90 bp | CCATCTCCCTCCAGCTTTGGGGTCTCCAGAAAGAGGCTGGATTTCTGGGATGAAGTGTCCAAGCAGATGTaGCACTCGAAAGTGCTGTCC | + |
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Preference number: 5 (lower is better) Translates to: PSPSSFGVSRKRLDFWDEVSKQM*HSKVLS Trigger: GGACAGCACTTTCGAGTGCAACATCTGCTTGGACAC...TTCATCCCAGAAATCCAGCCTCTTTCTGGAGACCCCAAAGCTGGAGGGAGATGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000266252.8 ENST00000326132.11 ENST00000426256.6 ENST00000518626.5 |
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| CDS-3UTR CAA 90 bp | CCATCTCCCTCCAGCTTTGGGGTCTCCAGAAAGAGGCTGGATTTCTGGGATGAATCCAAATCCAAATCCTaGAAATCCCCCTCTATTCTC | + |
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Preference number: 5 (lower is better) Translates to: PSPSSFGVSRKRLDFWDESKSKS*KSPSIL Trigger: GAGAATAGAGGGGGATTTCAAGGATTTGGATTTGGA...TTCATCCCAGAAATCCAGCCTCTTTCTGGAGACCCCAAAGCTGGAGGGAGATGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000326132.11 ENST00000518626.5 |
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| CDS CAA 90 bp | CCACACAGGCTGATGACGGCATCCTTGGCTGTGTCCAAGCAGATGTaGCACTCGAAAGTGCTGTCCTGCCCTCCGCTCTCGCCAGCGCCA | + |
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Preference number: 6 (lower is better) Translates to: PHRLMTASLAVSKQM*HSKVLSCPPLSPAP Trigger: TGGCGCTGGCGAGAGCGGAGGGCAGGACAGCACTTTCGAGTGCAACATCTGCTTGGACACAGCCAAGGATGCCGTCATCAGCCTGTGTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000266252.8 ENST00000326132.11 ENST00000426256.6 ENST00000468921.5 ENST00000518626.5 |
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| CDS GCA 72 bp | CCTTGGCTGTGTCCAAGCAGATGTTGCACTCGAAAGTaGTGTCCTGCCCTCCGCTCTCGCCAGCGCCATTGC | + |
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Preference number: 6 (lower is better) Translates to: PWLCPSRCCTRK*CPALRSRQRHC Trigger: GCAATGGCGCTGGCGAGAGCGGAGGGCAGGACAGCACTTTCGAGTGCAACATCTGCTTGGACACAGCCAAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000266252.8 ENST00000326132.11 ENST00000426256.6 ENST00000468921.5 ENST00000518626.5 |
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| CDS GCA 72 bp | TGGAGTTCTCAGGAGATGCAGAGGCCGAGGGCCCCTTaGTTGCCATCCTTGGCTGTCAGCGAAGCTCTGAGT | + |
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Preference number: 6 (lower is better) Translates to: WSSQEMQRPRAP*LPSLAVSEALS Trigger: ACTCAGAGCTTCGCTGACAGCCAAGGATGGCAAGCAAGGGGCCCTCGGCCTCTGCATCTCCTGAGAACTCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000266252.8 ENST00000326132.11 ENST00000426256.6 ENST00000468921.5 ENST00000518626.5 |
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| CDS CCA 72 bp | GGGTACACGGCCAATACTAACGCCGCGTCAATCTGTTaGGTAAGACCTCCGACCCCTCCTACGCGGACTCCA | + |
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Preference number: 6 (lower is better) Translates to: GYTANTNAASIC*VRPPTPPTRTP Trigger: TGGAGTCCGCGTAGGAGGGGTCGGAGGTCTTACCCAACAGATTGACGCGGCGTTAGTATTGGCCGTGTACCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000326132.11 ENST00000494514.5 |
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| CDS CAA 72 bp | GAGATGCAGAGGCCGAGGGCCCCTTGCTTGCCATCCTaGGCTGTCAGCGAAGCTCTGAGTGAAGACTTTCCC | + |
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Preference number: 6 (lower is better) Translates to: EMQRPRAPCLPS*AVSEALSEDFP Trigger: GGGAAAGTCTTCACTCAGAGCTTCGCTGACAGCCAAGGATGGCAAGCAAGGGGCCCTCGGCCTCTGCATCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000266252.8 ENST00000326132.11 ENST00000426256.6 ENST00000468921.5 ENST00000518626.5 |
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| CDS CAA 90 bp | CTGCACTGGAGTTCTCAGGAGATGCAGAGGCCGAGGGCCCCTTGCTaGCCATCCTTGGCTGTCAGCGAAGCTCTGAGTGAAGACTTTCCC | + |
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Preference number: 6 (lower is better) Translates to: LHWSSQEMQRPRAPC*PSLAVSEALSEDFP Trigger: GGGAAAGTCTTCACTCAGAGCTTCGCTGACAGCCAAGGATGGCAAGCAAGGGGCCCTCGGCCTCTGCATCTCCTGAGAACTCCAGTGCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000266252.8 ENST00000326132.11 ENST00000426256.6 ENST00000468921.5 ENST00000518626.5 |
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| CDS TCA 72 bp | CCCCTTGCTTGCCATCCTTGGCTGTCAGCGAAGCTCTaGGTGAAGACTTTCCCCAGGGAAATCCTGCCTCCG | + |
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Preference number: 6 (lower is better) Translates to: PLACHPWLSAKL*VKTFPREILPP Trigger: CGGAGGCAGGATTTCCCTGGGGAAAGTCTTCACTCAGAGCTTCGCTGACAGCCAAGGATGGCAAGCAAGGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000266252.8 ENST00000326132.11 ENST00000426256.6 ENST00000518626.5 |
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| CDS CAA 72 bp | CTGATGACGGCATCCTTGGCTGTGTCCAAGCAGATGTaGCACTCGAAAGTGCTGTCCTGCCCTCCGCTCTCG | + |
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Preference number: 6 (lower is better) Translates to: LMTASLAVSKQM*HSKVLSCPPLS Trigger: CGAGAGCGGAGGGCAGGACAGCACTTTCGAGTGCAACATCTGCTTGGACACAGCCAAGGATGCCGTCATCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000266252.8 ENST00000326132.11 ENST00000426256.6 ENST00000468921.5 ENST00000518626.5 |
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| CDS CAA 90 bp | AGTTCTCAGGAGATGCAGAGGCCGAGGGCCCCTTGCTTGCCATCCTaGGCTGTCAGCGAAGCTCTGAGTGAAGACTTTCCCCAGGGAAAT | + |
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Preference number: 6 (lower is better) Translates to: SSQEMQRPRAPCLPS*AVSEALSEDFPQGN Trigger: ATTTCCCTGGGGAAAGTCTTCACTCAGAGCTTCGCTGACAGCCAAGGATGGCAAGCAAGGGGCCCTCGGCCTCTGCATCTCCTGAGAACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000266252.8 ENST00000326132.11 ENST00000426256.6 ENST00000468921.5 ENST00000518626.5 |
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