Pregenerated sensors for RNF181 (Homo sapiens)
Ensembl gene IDs: ENSG00000168894Ensembl transcript IDs: ENST00000306368.9, ENST00000441634.5, ENST00000461845.1
Found 32 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ACAGCCAGAGCCAGGGATTCTGAGGCCTACCCAGTCCTGCTGAGGTaGGAAGTGATGGCAGCGGGGACAGGACTCAGGGAGCCCATTACG | + |
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Preference number: 1 (lower is better) Translates to: TARARDSEAYPVLLR*EVMAAGTGLREPIT Trigger: CGTAATGGGCTCCCTGAGTCCTGTCCCCGCTGCCATCACTTCCCACCTCAGCAGGACTGGGTAGGCCTCAGAATCCCTGGCTCTGGCTGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000441634.5 |
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| 3UTR-3UTR TCA 90 bp | TGCCTTCTGCGATTTAGGATCACCTTCCCCAACAGAAGTAGAGACCTGATGGAGCCCTGGCCAGGTCTGTaGTCAATACAGCCTCAGGGT | + |
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Preference number: 2 (lower is better) Translates to: CLLRFRITFPNRSRDLMEPWPGL*SIQPQG Trigger: ACCCTGAGGCTGTATTGATCACAGACCTGGCCAGGG...CTCCATCAGGTCTCTACTTCTGTTGGGGAAGGTGATCCTAAATCGCAGAAGGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000306368.9 |
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| 3UTR-3UTR CCA 90 bp | GCAGCCTGGTGCCTTCTGCGATTTAGGATCACCTTCCCCAACAGAAGTAGAGACAATACAGCCTCAGGGTaGGTAAAGAAACCTTTAATG | + |
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Preference number: 2 (lower is better) Translates to: AAWCLLRFRITFPNRSRDNTASG*VKKPLM Trigger: CATTAAAGGTTTCTTTACCCACCCTGAGGCTGTATT...GTCTCTACTTCTGTTGGGGAAGGTGATCCTAAATCGCAGAAGGCACCAGGCTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000306368.9 |
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| 3UTR CCA 72 bp | GCCAGGGATTCTGAGGCCTACCCAGTCCTGCTGAGGTaGGAAGTGATGGCAGCGGGGACAGGACTCAGGGAG | + |
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Preference number: 3 (lower is better) Translates to: ARDSEAYPVLLR*EVMAAGTGLRE Trigger: CTCCCTGAGTCCTGTCCCCGCTGCCATCACTTCCCACCTCAGCAGGACTGGGTAGGCCTCAGAATCCCTGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000441634.5 |
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| CDS-3UTR TCA 90 bp | CTACCCAGTCCTGCTGAGGTGGGAAGTGATGGCAGCGGGGACAGGACTCAGGGAGGCAGGGGCCAAAACTaGAGGCCTATGGGTGAGGGG | + |
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Preference number: 4 (lower is better) Translates to: LPSPAEVGSDGSGDRTQGGRGQN*RPMGEG Trigger: CCCCTCACCCATAGGCCTTCAGTTTTGGCCCCTGCC...TCCCTGAGTCCTGTCCCCGCTGCCATCACTTCCCACCTCAGCAGGACTGGGTAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000441634.5 |
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| CDS-3UTR GCA 90 bp | CTACCCAGTCCTGCTGAGGTGGGAAGTGATGGCAGCGGGGACAGGACTCAGGGATTGGTTCGCGTCTCCTaGTCAGGGTCCGACGGCTCG | + |
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Preference number: 4 (lower is better) Translates to: LPSPAEVGSDGSGDRTQGLVRVS*SGSDGS Trigger: CGAGCCGTCGGACCCTGAGCAGGAGACGCGAACCAA...TCCCTGAGTCCTGTCCCCGCTGCCATCACTTCCCACCTCAGCAGGACTGGGTAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000441634.5 |
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| CDS-3UTR CCA 90 bp | AGGGATTCTGAGGCCTACCCAGTCCTGCTGAGGTGGGAAGTGATGGCAGCGGGGCCAGTCCTGCTGAGGTaGGAAGTGATGGCAGCGGGG | + |
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Preference number: 4 (lower is better) Translates to: RDSEAYPVLLRWEVMAAGPVLLR*EVMAAG Trigger: CCCCGCTGCCATCACTTCCCACCTCAGCAGGACTGG...CCCCGCTGCCATCACTTCCCACCTCAGCAGGACTGGGTAGGCCTCAGAATCCCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000441634.5 |
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| CDS-3UTR TCA 90 bp | GTCCTGCTGAGGTGGGAAGTGATGGCAGCGGGGACAGGACTCAGGGAGCCCATTCAGAGCCAGGGATTCTaGGGCCTACCCAGTCCTGCT | + |
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Preference number: 4 (lower is better) Translates to: VLLRWEVMAAGTGLREPIQSQGF*GLPSPA Trigger: AGCAGGACTGGGTAGGCCTCAGAATCCCTGGCTCTG...AATGGGCTCCCTGAGTCCTGTCCCCGCTGCCATCACTTCCCACCTCAGCAGGAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000441634.5 |
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| CDS-3UTR GCA 90 bp | CTACCCAGTCCTGCTGAGGTGGGAAGTGATGGCAGCGGGGACAGGACTCAGGGACAGGCCTCTGGCGTCTaGATTGCTGAGGCTCTCACC | + |
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Preference number: 4 (lower is better) Translates to: LPSPAEVGSDGSGDRTQGQASGV*IAEALT Trigger: GGTGAGAGCCTCAGCAATGCAGACGCCAGAGGCCTG...TCCCTGAGTCCTGTCCCCGCTGCCATCACTTCCCACCTCAGCAGGACTGGGTAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000441634.5 |
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| CDS-3UTR TCA 90 bp | GGAGGATGCAGAGCCCCTGGCCAGGTCTGTGATCAATACAGCCTCAGGGTGGGTCACTTGAGCTCAGCCTaGGAGCCTCTGATGACTGTC | + |
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Preference number: 4 (lower is better) Translates to: GGCRAPGQVCDQYSLRVGHLSSA*EPLMTV Trigger: GACAGTCATCAGAGGCTCTCAGGCTGAGCTCAAGTG...ACCCACCCTGAGGCTGTATTGATCACAGACCTGGCCAGGGGCTCTGCATCCTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000306368.9 |
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| CDS-3UTR TCA 90 bp | GCCAGAGCCAGGGATTCTGAGGCCTACCCAGTCCTGCTGAGGTGGGAAGTGATGCACTTGAGCTCAGCCTaGGAGCCTCTGATGACTGTC | + |
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Preference number: 4 (lower is better) Translates to: ARARDSEAYPVLLRWEVMHLSSA*EPLMTV Trigger: GACAGTCATCAGAGGCTCTCAGGCTGAGCTCAAGTG...CATCACTTCCCACCTCAGCAGGACTGGGTAGGCCTCAGAATCCCTGGCTCTGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000441634.5 |
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| CDS-3UTR CCA 90 bp | AGTCCTGCTGAGGTGGGAAGTGATGGCAGCGGGGACAGGACTCAGGGAGCCCATGGAAAGAAGGCATGCTaGGCAGGGGCCAAAACTGAA | + |
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Preference number: 4 (lower is better) Translates to: SPAEVGSDGSGDRTQGAHGKKAC*AGAKTE Trigger: TTCAGTTTTGGCCCCTGCCCAGCATGCCTTCTTTCC...ATGGGCTCCCTGAGTCCTGTCCCCGCTGCCATCACTTCCCACCTCAGCAGGACT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000441634.5 |
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| CDS-3UTR GCA 90 bp | AGAAGTAGAGACCTGATGGAGGATGCAGAGCCCCTGGCCAGGTCTGTGATCAATTTGGTTCGCGTCTCCTaGTCAGGGTCCGACGGCTCG | + |
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Preference number: 4 (lower is better) Translates to: RSRDLMEDAEPLARSVINLVRVS*SGSDGS Trigger: CGAGCCGTCGGACCCTGAGCAGGAGACGCGAACCAA...ATTGATCACAGACCTGGCCAGGGGCTCTGCATCCTCCATCAGGTCTCTACTTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000306368.9 |
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| CDS-3UTR GCA 90 bp | AACAGAAGTAGAGACCTGATGGAGGATGCAGAGCCCCTGGCCAGGTCTGTGATCAGACCTGATGGAGGATaGAGAGCCCCTGGCCAGGTC | + |
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Preference number: 4 (lower is better) Translates to: NRSRDLMEDAEPLARSVIRPDGG*RAPGQV Trigger: GACCTGGCCAGGGGCTCTGCATCCTCCATCAGGTCT...GATCACAGACCTGGCCAGGGGCTCTGCATCCTCCATCAGGTCTCTACTTCTGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000306368.9 |
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| CDS-3UTR CCA 90 bp | GGAGGATGCAGAGCCCCTGGCCAGGTCTGTGATCAATACAGCCTCAGGGTGGGTAAGTGTCGTCATCAGTaGGCAGCTCATAGCGGCACA | + |
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Preference number: 4 (lower is better) Translates to: GGCRAPGQVCDQYSLRVGKCRHQ*AAHSGT Trigger: TGTGCCGCTATGAGCTGCCCACTGATGACGACACTT...ACCCACCCTGAGGCTGTATTGATCACAGACCTGGCCAGGGGCTCTGCATCCTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000306368.9 |
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| CDS-3UTR CCA 90 bp | GGAGGATGCAGAGCCCCTGGCCAGGTCTGTGATCAATACAGCCTCAGGGTGGGTAGGAAAACCGCAGCCTaGTGCCTTCTGCGATTTAGG | + |
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Preference number: 4 (lower is better) Translates to: GGCRAPGQVCDQYSLRVGRKTAA*CLLRFR Trigger: CCTAAATCGCAGAAGGCACCAGGCTGCGGTTTTCCT...ACCCACCCTGAGGCTGTATTGATCACAGACCTGGCCAGGGGCTCTGCATCCTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000306368.9 |
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| CDS-3UTR CCA 90 bp | AGTCCTGCTGAGGTGGGAAGTGATGGCAGCGGGGACAGGACTCAGGGAGCCCATCAGCTATTATGGGGCTaGCTCTGTTTTCAGGCCTCT | + |
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Preference number: 4 (lower is better) Translates to: SPAEVGSDGSGDRTQGAHQLLWG*LCFQAS Trigger: AGAGGCCTGAAAACAGAGCCAGCCCCATAATAGCTG...ATGGGCTCCCTGAGTCCTGTCCCCGCTGCCATCACTTCCCACCTCAGCAGGACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000441634.5 |
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| CDS-3UTR GCA 90 bp | AGGGATTCTGAGGCCTACCCAGTCCTGCTGAGGTGGGAAGTGATGGCAGCGGGGGACAGGAATTTGTCTTaGTTAGCCAGGGCAGAATGC | + |
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Preference number: 4 (lower is better) Translates to: RDSEAYPVLLRWEVMAAGDRNLS*LARAEC Trigger: GCATTCTGCCCTGGCTAAGCAAGACAAATTCCTGTC...CCCCGCTGCCATCACTTCCCACCTCAGCAGGACTGGGTAGGCCTCAGAATCCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000441634.5 |
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| CDS-3UTR CCA 90 bp | AGAGCCAGGGATTCTGAGGCCTACCCAGTCCTGCTGAGGTGGGAAGTGATGGCAAAGTGTCGTCATCAGTaGGCAGCTCATAGCGGCACA | + |
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Preference number: 4 (lower is better) Translates to: RARDSEAYPVLLRWEVMAKCRHQ*AAHSGT Trigger: TGTGCCGCTATGAGCTGCCCACTGATGACGACACTT...TGCCATCACTTCCCACCTCAGCAGGACTGGGTAGGCCTCAGAATCCCTGGCTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000441634.5 |
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| CDS-3UTR TCA 90 bp | AGAAGTAGAGACCTGATGGAGGATGCAGAGCCCCTGGCCAGGTCTGTGATCAATCCCTGGCCAGGTCTGTaGTCAATACAGCCTCAGGGT | + |
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Preference number: 4 (lower is better) Translates to: RSRDLMEDAEPLARSVINPWPGL*SIQPQG Trigger: ACCCTGAGGCTGTATTGATCACAGACCTGGCCAGGG...ATTGATCACAGACCTGGCCAGGGGCTCTGCATCCTCCATCAGGTCTCTACTTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000306368.9 |
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| CDS-3UTR GCA 90 bp | AGACCTGATGGAGGATGCAGAGCCCCTGGCCAGGTCTGTGATCAATACAGCCTCCAGCCTGGTGCCTTCTaGGATTTAGGATCACCTTCC | + |
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Preference number: 4 (lower is better) Translates to: RPDGGCRAPGQVCDQYSLQPGAF*DLGSPS Trigger: GGAAGGTGATCCTAAATCGCAGAAGGCACCAGGCTG...GAGGCTGTATTGATCACAGACCTGGCCAGGGGCTCTGCATCCTCCATCAGGTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000306368.9 |
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| CDS-3UTR CCA 90 bp | AGAGCCAGGGATTCTGAGGCCTACCCAGTCCTGCTGAGGTGGGAAGTGATGGCAGATGGGCAGCTATTATaGGGCTGGCTCTGTTTTCAG | + |
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Preference number: 4 (lower is better) Translates to: RARDSEAYPVLLRWEVMADGQLL*GWLCFQ Trigger: CTGAAAACAGAGCCAGCCCCATAATAGCTGCCCATC...TGCCATCACTTCCCACCTCAGCAGGACTGGGTAGGCCTCAGAATCCCTGGCTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000441634.5 |
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| CDS-3UTR TCA 90 bp | AGAAGTAGAGACCTGATGGAGGATGCAGAGCCCCTGGCCAGGTCTGTGATCAATACAGAAGTAGAGACCTaGTGGAGGATGCAGAGCCCC | + |
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Preference number: 4 (lower is better) Translates to: RSRDLMEDAEPLARSVINTEVET*WRMQSP Trigger: GGGGCTCTGCATCCTCCATCAGGTCTCTACTTCTGT...ATTGATCACAGACCTGGCCAGGGGCTCTGCATCCTCCATCAGGTCTCTACTTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000306368.9 |
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| CDS-3UTR GCA 90 bp | ATCACCTTCCCCAACAGAAGTAGAGACCTGATGGAGGATGCAGAGCCCCTGGCCAAAACCGCAGCCTGGTaGCTTCTGCGATTTAGGATC | + |
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Preference number: 4 (lower is better) Translates to: ITFPNRSRDLMEDAEPLAKTAAW*LLRFRI Trigger: GATCCTAAATCGCAGAAGGCACCAGGCTGCGGTTTT...GGCCAGGGGCTCTGCATCCTCCATCAGGTCTCTACTTCTGTTGGGGAAGGTGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000306368.9 |
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| CDS-3UTR CCA 90 bp | TTCAGGCCTCTGGCGTCTGCATTGCTGAGGCTCTCACCACAAATCAAAGTCACTCTATGGGTGAGGGGATaGGCAGCTATTATGGGGCTG | + |
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Preference number: 4 (lower is better) Translates to: FRPLASALLRLSPQIKVTLWVRG*AAIMGL Trigger: CAGCCCCATAATAGCTGCCCATCCCCTCACCCATAG...AGTGACTTTGATTTGTGGTGAGAGCCTCAGCAATGCAGACGCCAGAGGCCTGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000441634.5 |
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| CDS-3UTR TCA 90 bp | TTCAGGCCTCTGGCGTCTGCATTGCTGAGGCTCTCACCACAAATCAAAGTCACTTGGCGTCTGCATTGCTaGGGCTCTCACCACAAATCA | + |
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Preference number: 4 (lower is better) Translates to: FRPLASALLRLSPQIKVTWRLHC*GSHHKS Trigger: TGATTTGTGGTGAGAGCCTCAGCAATGCAGACGCCA...AGTGACTTTGATTTGTGGTGAGAGCCTCAGCAATGCAGACGCCAGAGGCCTGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000441634.5 |
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| CDS-3UTR GCA 90 bp | AGGATCACCTTCCCCAACAGAAGTAGAGACCTGATGGAGGATGCAGAGCCCCTGGACAGGAATTTGTCTTaGTTAGCCAGGGCAGAATGC | + |
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Preference number: 4 (lower is better) Translates to: RITFPNRSRDLMEDAEPLDRNLS*LARAEC Trigger: GCATTCTGCCCTGGCTAAGCAAGACAAATTCCTGTC...CAGGGGCTCTGCATCCTCCATCAGGTCTCTACTTCTGTTGGGGAAGGTGATCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000306368.9 |
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| CDS-3UTR CCA 90 bp | TTCAGGCCTCTGGCGTCTGCATTGCTGAGGCTCTCACCACAAATCAAAGTCACTAAAACTGAAGGCCTATaGGTGAGGGGATGGGCAGCT | + |
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Preference number: 4 (lower is better) Translates to: FRPLASALLRLSPQIKVTKTEGL*VRGWAA Trigger: AGCTGCCCATCCCCTCACCCATAGGCCTTCAGTTTT...AGTGACTTTGATTTGTGGTGAGAGCCTCAGCAATGCAGACGCCAGAGGCCTGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000441634.5 |
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| CDS-3UTR TCA 90 bp | TTCAGGCCTCTGGCGTCTGCATTGCTGAGGCTCTCACCACAAATCAAAGTCACTTGCTGTTTTCGAGCCTaGAGGAAAGAAGGCATGCTG | + |
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Preference number: 4 (lower is better) Translates to: FRPLASALLRLSPQIKVTCCFRA*RKEGML Trigger: CAGCATGCCTTCTTTCCTTCAGGCTCGAAAACAGCA...AGTGACTTTGATTTGTGGTGAGAGCCTCAGCAATGCAGACGCCAGAGGCCTGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000441634.5 |
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| CDS-3UTR CCA 90 bp | AGACCTGATGGAGGATGCAGAGCCCCTGGCCAGGTCTGTGATCAATACAGCCTCAATACAGCCTCAGGGTaGGTAAAGAAACCTTTAATG | + |
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Preference number: 4 (lower is better) Translates to: RPDGGCRAPGQVCDQYSLNTASG*VKKPLM Trigger: CATTAAAGGTTTCTTTACCCACCCTGAGGCTGTATT...GAGGCTGTATTGATCACAGACCTGGCCAGGGGCTCTGCATCCTCCATCAGGTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000306368.9 |
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| CDS-3UTR CAA 90 bp | AGGGATTCTGAGGCCTACCCAGTCCTGCTGAGGTGGGAAGTGATGGCAGCGGGGCCTCTGGCGTCTGCATaGCTGAGGCTCTCACCACAA | + |
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Preference number: 5 (lower is better) Translates to: RDSEAYPVLLRWEVMAAGPLASA*LRLSPQ Trigger: TTGTGGTGAGAGCCTCAGCAATGCAGACGCCAGAGG...CCCCGCTGCCATCACTTCCCACCTCAGCAGGACTGGGTAGGCCTCAGAATCCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000441634.5 |
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| CDS TCA 72 bp | ACACACGGGGCACTTGAGCTCTTTAGGAAGGAGTGCTaGTCAGGAGAGCTGCTACAGGCTCTGCCTCCCAAG | + |
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Preference number: 6 (lower is better) Translates to: THGALELFRKEC*SGELLQALPPK Trigger: CTTGGGAGGCAGAGCCTGTAGCAGCTCTCCTGATCAGCACTCCTTCCTAAAGAGCTCAAGTGCCCCGTGTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000461845.1 |
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