Pregenerated sensors for RNF180 (Homo sapiens)
Ensembl gene IDs: ENSG00000164197Ensembl transcript IDs: ENST00000296615.10, ENST00000389100.9
Found 125 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | TTCTGTGAAGAATCAAAGACTCCAACTGTAATTGCATTTAATCAGAGAATGCTCCTCTTTATTGGACAGTaGGTTTTTACTGTGAGAGAT | + |
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Preference number: 2 (lower is better) Translates to: FCEESKTPTVIAFNQRMLLFIGQ*VFTVRD Trigger: ATCTCTCACAGTAAAAACTCACTGTCCAATAAAGAG...GAGCATTCTCTGATTAAATGCAATTACAGTTGGAGTCTTTGATTCTTCACAGAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000389100.9 |
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| 3UTR-3UTR GCA 90 bp | TTCTGTGAAGAATCAAAGACTCCAACTGTAATTGCATTTAATCAGAGAATGCTCTTACATTTTGGACCATaGATTGCTCTTTTAGACTAC | + |
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Preference number: 2 (lower is better) Translates to: FCEESKTPTVIAFNQRMLLHFGP*IALLDY Trigger: GTAGTCTAAAAGAGCAATGCATGGTCCAAAATGTAA...GAGCATTCTCTGATTAAATGCAATTACAGTTGGAGTCTTTGATTCTTCACAGAA 34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000389100.9 |
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| 3UTR GCA 72 bp | TGCTTTCAAGGACGCACAGAAAATGGAAGTCTTTGCTaGTTGGAATGCAAAATGGTACAGCCATTCTGGAAA | + |
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Preference number: 3 (lower is better) Translates to: CFQGRTENGSLC*LECKMVQPFWK Trigger: TTTCCAGAATGGCTGTACCATTTTGCATTCCAAGCAGCAAAGACTTCCATTTTCTGTGCGTCCTTGAAAGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000296615.10 |
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| 3UTR CCA 72 bp | GAATACCAGTGCTTGCTTTCAAGGACGCACAGAAAATaGAAGTCTTTGCTGCTTGGAATGCAAAATGGTACA | + |
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Preference number: 3 (lower is better) Translates to: EYQCLLSRTHRK*KSLLLGMQNGT Trigger: TGTACCATTTTGCATTCCAAGCAGCAAAGACTTCCATTTTCTGTGCGTCCTTGAAAGCAAGCACTGGTATTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000296615.10 |
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| 3UTR-3UTR CAA 90 bp | GTGAAACTGATGGCAGCACTGCTTTCATATTTAGCATATAATACTATAGTGGCACCAGTTTTTCCTTTTTaGAATTGGGTTACCTGCCCC | + |
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Preference number: 3 (lower is better) Translates to: VKLMAALLSYLAYNTIVAPVFPF*NWVTCP Trigger: GGGGCAGGTAACCCAATTCAAAAAAGGAAAAACTGG...TGCCACTATAGTATTATATGCTAAATATGAAAGCAGTGCTGCCATCAGTTTCAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000389100.9 |
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| 3UTR-3UTR CAA 90 bp | TTTTATTTTGAATGGCTACTGTGTGCTACATACCAGAAGAAACTGGTTTCTTTCACTGTTAAAGCCCAGTaGATCCCAATGTTTTTGGAT | + |
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Preference number: 3 (lower is better) Translates to: FYFEWLLCATYQKKLVSFTVKAQ*IPMFLD Trigger: ATCCAAAAACATTGGGATCAACTGGGCTTTAACAGT...GAAAGAAACCAGTTTCTTCTGGTATGTAGCACACAGTAGCCATTCAAAATAAAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000389100.9 |
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| CDS-3UTR TCA 90 bp | AAATGGAAGTCTTTGCTGCTTGGAATGCAAAATGGTACAGCCATTCTGGAAAACCCAGCAGCCAGGCTCTaGGGACTCGCTGCGGCTCCG | + |
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Preference number: 4 (lower is better) Translates to: KWKSLLLGMQNGTAILENPAARL*GLAAAP Trigger: CGGAGCCGCAGCGAGTCCTCAGAGCCTGGCTGCTGG...GTTTTCCAGAATGGCTGTACCATTTTGCATTCCAAGCAGCAAAGACTTCCATTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000296615.10 |
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| CDS-3UTR GCA 90 bp | AAATGGAAGTCTTTGCTGCTTGGAATGCAAAATGGTACAGCCATTCTGGAAAACGCTCTGAGGACTCGCTaGGGCTCCGGCGGCGGCGAT | + |
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Preference number: 4 (lower is better) Translates to: KWKSLLLGMQNGTAILENALRTR*GSGGGD Trigger: ATCGCCGCCGCCGGAGCCGCAGCGAGTCCTCAGAGC...GTTTTCCAGAATGGCTGTACCATTTTGCATTCCAAGCAGCAAAGACTTCCATTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000296615.10 |
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| CDS-3UTR GCA 90 bp | AAATGGAAGTCTTTGCTGCTTGGAATGCAAAATGGTACAGCCATTCTGGAAAACCTGAGGCCTCCGGCATaGTCCTGCCAGCTGAGGGCA | + |
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Preference number: 4 (lower is better) Translates to: KWKSLLLGMQNGTAILENLRPPA*SCQLRA Trigger: TGCCCTCAGCTGGCAGGAGCATGCCGGAGGCCTCAG...GTTTTCCAGAATGGCTGTACCATTTTGCATTCCAAGCAGCAAAGACTTCCATTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000296615.10 |
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| CDS-3UTR TCA 90 bp | TTTTATTTTGAATGGCTACTGTGTGCTACATACCAGAAGAAACTGGTTTCTTTCCCAGCAGCCAGGCTCTaGGGACTCGCTGCGGCTCCG | + |
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Preference number: 4 (lower is better) Translates to: FYFEWLLCATYQKKLVSFPAARL*GLAAAP Trigger: CGGAGCCGCAGCGAGTCCTCAGAGCCTGGCTGCTGG...GAAAGAAACCAGTTTCTTCTGGTATGTAGCACACAGTAGCCATTCAAAATAAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000389100.9 |
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| CDS-3UTR GCA 90 bp | TTTTATTTTGAATGGCTACTGTGTGCTACATACCAGAAGAAACTGGTTTCTTTCGCTCTGAGGACTCGCTaGGGCTCCGGCGGCGGCGAT | + |
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Preference number: 4 (lower is better) Translates to: FYFEWLLCATYQKKLVSFALRTR*GSGGGD Trigger: ATCGCCGCCGCCGGAGCCGCAGCGAGTCCTCAGAGC...GAAAGAAACCAGTTTCTTCTGGTATGTAGCACACAGTAGCCATTCAAAATAAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000389100.9 |
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| CDS-3UTR TCA 90 bp | AAATGGAAGTCTTTGCTGCTTGGAATGCAAAATGGTACAGCCATTCTGGAAAACCATGCTCCTGCCAGCTaGGGGCAGGTCCATCAGGAA | + |
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Preference number: 4 (lower is better) Translates to: KWKSLLLGMQNGTAILENHAPAS*GQVHQE Trigger: TTCCTGATGGACCTGCCCTCAGCTGGCAGGAGCATG...GTTTTCCAGAATGGCTGTACCATTTTGCATTCCAAGCAGCAAAGACTTCCATTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000296615.10 |
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| CDS-3UTR GCA 90 bp | GTGAAACTGATGGCAGCACTGCTTTCATATTTAGCATATAATACTATAGTGGCACTGAGGCCTCCGGCATaGTCCTGCCAGCTGAGGGCA | + |
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Preference number: 4 (lower is better) Translates to: VKLMAALLSYLAYNTIVALRPPA*SCQLRA Trigger: TGCCCTCAGCTGGCAGGAGCATGCCGGAGGCCTCAG...TGCCACTATAGTATTATATGCTAAATATGAAAGCAGTGCTGCCATCAGTTTCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000389100.9 |
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| CDS-3UTR GCA 90 bp | AAATGGAAGTCTTTGCTGCTTGGAATGCAAAATGGTACAGCCATTCTGGAAAACTCCAGAGGGGAGAGGTaGTCTTCCTGGTCTGAGGCC | + |
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Preference number: 4 (lower is better) Translates to: KWKSLLLGMQNGTAILENSRGER*SSWSEA Trigger: GGCCTCAGACCAGGAAGAGCACCTCTCCCCTCTGGA...GTTTTCCAGAATGGCTGTACCATTTTGCATTCCAAGCAGCAAAGACTTCCATTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000296615.10 |
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| CDS-3UTR GCA 90 bp | GCTACTGTGTGCTACATACCAGAAGAAACTGGTTTCTTTCCATCTGAGATTTTATCCAGAGGGGAGAGGTaGTCTTCCTGGTCTGAGGCC | + |
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Preference number: 4 (lower is better) Translates to: ATVCYIPEETGFFPSEILSRGER*SSWSEA Trigger: GGCCTCAGACCAGGAAGAGCACCTCTCCCCTCTGGA...TAAAATCTCAGATGGAAAGAAACCAGTTTCTTCTGGTATGTAGCACACAGTAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000389100.9 |
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| CDS-3UTR CCA 90 bp | AAGTCTTTGCTGCTTGGAATGCAAAATGGTACAGCCATTCTGGAAAACAATTTGGAGAGGTGCTCTTCCTaGTCTGAGGCCTCCGGCATG | + |
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Preference number: 4 (lower is better) Translates to: KSLLLGMQNGTAILENNLERCSS*SEASGM Trigger: CATGCCGGAGGCCTCAGACCAGGAAGAGCACCTCTC...CAAATTGTTTTCCAGAATGGCTGTACCATTTTGCATTCCAAGCAGCAAAGACTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000296615.10 |
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| CDS-3UTR TCA 90 bp | GTGAAACTGATGGCAGCACTGCTTTCATATTTAGCATATAATACTATAGTGGCACATGCTCCTGCCAGCTaGGGGCAGGTCCATCAGGAA | + |
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Preference number: 4 (lower is better) Translates to: VKLMAALLSYLAYNTIVAHAPAS*GQVHQE Trigger: TTCCTGATGGACCTGCCCTCAGCTGGCAGGAGCATG...TGCCACTATAGTATTATATGCTAAATATGAAAGCAGTGCTGCCATCAGTTTCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000389100.9 |
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| CDS-3UTR TCA 90 bp | AATGGAAGTCTTTGCTGCTTGGAATGCAAAATGGTACAGCCATTCTGGAAAACATGCCCAGGCTGGTCTTaGACTCCTGAACTCAAGCAA | + |
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Preference number: 4 (lower is better) Translates to: NGSLCCLECKMVQPFWKTCPGWS*TPELKQ Trigger: TTGCTTGAGTTCAGGAGTTCAAGACCAGCCTGGGCA...TGTTTTCCAGAATGGCTGTACCATTTTGCATTCCAAGCAGCAAAGACTTCCATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000296615.10 |
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| CDS-3UTR CCA 90 bp | AAATGGAAGTCTTTGCTGCTTGGAATGCAAAATGGTACAGCCATTCTGGAAAACTCTGCCTGCCTGTGTTaGCTGATAATCAGTCCGGCT | + |
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Preference number: 4 (lower is better) Translates to: KWKSLLLGMQNGTAILENSACLC*LIISPA Trigger: AGCCGGACTGATTATCAGCCAACACAGGCAGGCAGA...GTTTTCCAGAATGGCTGTACCATTTTGCATTCCAAGCAGCAAAGACTTCCATTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000296615.10 |
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| CDS-3UTR CCA 90 bp | TTCTGTGAAGAATCAAAGACTCCAACTGTAATTGCATTTAATCAGAGAATGCTCGAGAGGTGCTCTTCCTaGTCTGAGGCCTCCGGCATG | + |
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Preference number: 4 (lower is better) Translates to: FCEESKTPTVIAFNQRMLERCSS*SEASGM Trigger: CATGCCGGAGGCCTCAGACCAGGAAGAGCACCTCTC...GAGCATTCTCTGATTAAATGCAATTACAGTTGGAGTCTTTGATTCTTCACAGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000389100.9 |
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| CDS-3UTR GCA 90 bp | AAGTCTTTGCTGCTTGGAATGCAAAATGGTACAGCCATTCTGGAAAACAATTTGGGAGAGATGTACAGCTaGAAGCTGGCCACAGGAACA | + |
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Preference number: 4 (lower is better) Translates to: KSLLLGMQNGTAILENNLGEMYS*KLATGT Trigger: TGTTCCTGTGGCCAGCTTGCAGCTGTACATCTCTCC...CAAATTGTTTTCCAGAATGGCTGTACCATTTTGCATTCCAAGCAGCAAAGACTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000296615.10 |
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| CDS-3UTR GCA 90 bp | GCTACTGTGTGCTACATACCAGAAGAAACTGGTTTCTTTCCATCTGAGATTTTAGCACCGTGTGGGAACTaGCTTCTTGTAACTGGAGCT | + |
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Preference number: 4 (lower is better) Translates to: ATVCYIPEETGFFPSEILAPCGN*LLVTGA Trigger: AGCTCCAGTTACAAGAAGGCAGTTCCCACACGGTGC...TAAAATCTCAGATGGAAAGAAACCAGTTTCTTCTGGTATGTAGCACACAGTAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000389100.9 |
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| CDS-3UTR GCA 90 bp | GCTACTGTGTGCTACATACCAGAAGAAACTGGTTTCTTTCCATCTGAGATTTTAGTAATCCATCCTGTGTaGACCGTGTGGGAACTGCCT | + |
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Preference number: 4 (lower is better) Translates to: ATVCYIPEETGFFPSEILVIHPV*TVWELP Trigger: AGGCAGTTCCCACACGGTGCACACAGGATGGATTAC...TAAAATCTCAGATGGAAAGAAACCAGTTTCTTCTGGTATGTAGCACACAGTAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000389100.9 |
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| CDS-3UTR CCA 90 bp | GCTACTGTGTGCTACATACCAGAAGAAACTGGTTTCTTTCCATCTGAGATTTTATCTGCCTGCCTGTGTTaGCTGATAATCAGTCCGGCT | + |
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Preference number: 4 (lower is better) Translates to: ATVCYIPEETGFFPSEILSACLC*LIISPA Trigger: AGCCGGACTGATTATCAGCCAACACAGGCAGGCAGA...TAAAATCTCAGATGGAAAGAAACCAGTTTCTTCTGGTATGTAGCACACAGTAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000389100.9 |
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| CDS-3UTR TCA 90 bp | AAGTCTTTGCTGCTTGGAATGCAAAATGGTACAGCCATTCTGGAAAACAATTTGCAGCAATCCCACTCCTaGGTATTTACCCTGCTTCTG | + |
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Preference number: 4 (lower is better) Translates to: KSLLLGMQNGTAILENNLQQSHS*VFTLLL Trigger: CAGAAGCAGGGTAAATACTCAGGAGTGGGATTGCTG...CAAATTGTTTTCCAGAATGGCTGTACCATTTTGCATTCCAAGCAGCAAAGACTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000296615.10 |
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| CDS-3UTR GCA 90 bp | GTGAAACTGATGGCAGCACTGCTTTCATATTTAGCATATAATACTATAGTGGCAGGAGAGATGTACAGCTaGAAGCTGGCCACAGGAACA | + |
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Preference number: 4 (lower is better) Translates to: VKLMAALLSYLAYNTIVAGEMYS*KLATGT Trigger: TGTTCCTGTGGCCAGCTTGCAGCTGTACATCTCTCC...TGCCACTATAGTATTATATGCTAAATATGAAAGCAGTGCTGCCATCAGTTTCAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000389100.9 |
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| CDS-3UTR GCA 90 bp | AAGTCTTTGCTGCTTGGAATGCAAAATGGTACAGCCATTCTGGAAAACAATTTGGAAAAATTGGCTGAGTaGAGGAAGTCCAGAGGGGAG | + |
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Preference number: 4 (lower is better) Translates to: KSLLLGMQNGTAILENNLEKLAE*RKSRGE Trigger: CTCCCCTCTGGACTTCCTGCACTCAGCCAATTTTTC...CAAATTGTTTTCCAGAATGGCTGTACCATTTTGCATTCCAAGCAGCAAAGACTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000296615.10 |
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| CDS-3UTR CCA 90 bp | AAATGGAAGTCTTTGCTGCTTGGAATGCAAAATGGTACAGCCATTCTGGAAAACTGTACAGCTGCAAGCTaGCCACAGGAACATTTTGGA | + |
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Preference number: 4 (lower is better) Translates to: KWKSLLLGMQNGTAILENCTAAS*PQEHFG Trigger: TCCAAAATGTTCCTGTGGCCAGCTTGCAGCTGTACA...GTTTTCCAGAATGGCTGTACCATTTTGCATTCCAAGCAGCAAAGACTTCCATTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000296615.10 |
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| CDS-3UTR CCA 90 bp | AAATGGAAGTCTTTGCTGCTTGGAATGCAAAATGGTACAGCCATTCTGGAAAACCATCTCAAAATATGTTaGTCGCACCTCCAGGCAGAG | + |
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Preference number: 4 (lower is better) Translates to: KWKSLLLGMQNGTAILENHLKIC*SHLQAE Trigger: CTCTGCCTGGAGGTGCGACCAACATATTTTGAGATG...GTTTTCCAGAATGGCTGTACCATTTTGCATTCCAAGCAGCAAAGACTTCCATTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000296615.10 |
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| CDS-3UTR CCA 90 bp | GTGAAACTGATGGCAGCACTGCTTTCATATTTAGCATATAATACTATAGTGGCACCTGTGTGCACCGTGTaGGAACTGCCTTCTTGTAAC | + |
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Preference number: 4 (lower is better) Translates to: VKLMAALLSYLAYNTIVAPVCTV*ELPSCN Trigger: GTTACAAGAAGGCAGTTCCCACACGGTGCACACAGG...TGCCACTATAGTATTATATGCTAAATATGAAAGCAGTGCTGCCATCAGTTTCAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000389100.9 |
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| CDS-3UTR TCA 90 bp | AAATGGAAGTCTTTGCTGCTTGGAATGCAAAATGGTACAGCCATTCTGGAAAACTTGTCACAACCTGACTaGACTCTAGGATGTGACAAG | + |
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Preference number: 4 (lower is better) Translates to: KWKSLLLGMQNGTAILENLSQPD*TLGCDK Trigger: CTTGTCACATCCTAGAGTTCAGTCAGGTTGTGACAA...GTTTTCCAGAATGGCTGTACCATTTTGCATTCCAAGCAGCAAAGACTTCCATTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000296615.10 |
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| CDS-3UTR TCA 90 bp | AATGGAAGTCTTTGCTGCTTGGAATGCAAAATGGTACAGCCATTCTGGAAAACAGCTTCTAGACCACACTaGAATTCTCCTCCTCTTTGT | + |
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Preference number: 4 (lower is better) Translates to: NGSLCCLECKMVQPFWKTASRPH*NSPPLC Trigger: ACAAAGAGGAGGAGAATTTCAGTGTGGTCTAGAAGC...TGTTTTCCAGAATGGCTGTACCATTTTGCATTCCAAGCAGCAAAGACTTCCATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000296615.10 |
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| CDS-3UTR TCA 90 bp | GTGAAACTGATGGCAGCACTGCTTTCATATTTAGCATATAATACTATAGTGGCACAGCAATCCCACTCCTaGGTATTTACCCTGCTTCTG | + |
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Preference number: 4 (lower is better) Translates to: VKLMAALLSYLAYNTIVAQQSHS*VFTLLL Trigger: CAGAAGCAGGGTAAATACTCAGGAGTGGGATTGCTG...TGCCACTATAGTATTATATGCTAAATATGAAAGCAGTGCTGCCATCAGTTTCAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000389100.9 |
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| CDS-3UTR GCA 90 bp | AAGTCTTTGCTGCTTGGAATGCAAAATGGTACAGCCATTCTGGAAAACAATTTGATGGTCTCATTAGTCTaGCTGCCTGTGTTGGCTGAT | + |
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Preference number: 4 (lower is better) Translates to: KSLLLGMQNGTAILENNLMVSLV*LPVLAD Trigger: ATCAGCCAACACAGGCAGGCAGACTAATGAGACCAT...CAAATTGTTTTCCAGAATGGCTGTACCATTTTGCATTCCAAGCAGCAAAGACTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000296615.10 |
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| CDS-3UTR CCA 90 bp | AATGGAAGTCTTTGCTGCTTGGAATGCAAAATGGTACAGCCATTCTGGAAAACAGTCCACTGGGCTTTTTaGATTAGGCAGCTTATCCAT | + |
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Preference number: 4 (lower is better) Translates to: NGSLCCLECKMVQPFWKTVHWAF*IRQLIH Trigger: ATGGATAAGCTGCCTAATCCAAAAAGCCCAGTGGAC...TGTTTTCCAGAATGGCTGTACCATTTTGCATTCCAAGCAGCAAAGACTTCCATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000296615.10 |
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| CDS-3UTR CCA 90 bp | AATGGAAGTCTTTGCTGCTTGGAATGCAAAATGGTACAGCCATTCTGGAAAACATTTCCAACTGTCCACTaGGCTTTTTGGATTAGGCAG | + |
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Preference number: 4 (lower is better) Translates to: NGSLCCLECKMVQPFWKTFPTVH*AFWIRQ Trigger: CTGCCTAATCCAAAAAGCCCAGTGGACAGTTGGAAA...TGTTTTCCAGAATGGCTGTACCATTTTGCATTCCAAGCAGCAAAGACTTCCATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000296615.10 |
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| CDS-3UTR CCA 90 bp | AATGGAAGTCTTTGCTGCTTGGAATGCAAAATGGTACAGCCATTCTGGAAAACATGCCCAATGAAAAATTaGCTGAGTGCAGGAAGTCCA | + |
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Preference number: 4 (lower is better) Translates to: NGSLCCLECKMVQPFWKTCPMKN*LSAGSP Trigger: TGGACTTCCTGCACTCAGCCAATTTTTCATTGGGCA...TGTTTTCCAGAATGGCTGTACCATTTTGCATTCCAAGCAGCAAAGACTTCCATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000296615.10 |
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| CDS-3UTR CCA 90 bp | AATGGAAGTCTTTGCTGCTTGGAATGCAAAATGGTACAGCCATTCTGGAAAACAAGGACGCACAGAAAATaGAAGTCTTTGCTGCTTGGA | + |
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Preference number: 4 (lower is better) Translates to: NGSLCCLECKMVQPFWKTRTHRK*KSLLLG Trigger: TCCAAGCAGCAAAGACTTCCATTTTCTGTGCGTCCT...TGTTTTCCAGAATGGCTGTACCATTTTGCATTCCAAGCAGCAAAGACTTCCATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000296615.10 |
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| CDS-3UTR CCA 90 bp | GTGAAACTGATGGCAGCACTGCTTTCATATTTAGCATATAATACTATAGTGGCACTGCCTTCTTGTAACTaGAGCTGCATGTCTGCGGAA | + |
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Preference number: 4 (lower is better) Translates to: VKLMAALLSYLAYNTIVALPSCN*SCMSAE Trigger: TTCCGCAGACATGCAGCTCCAGTTACAAGAAGGCAG...TGCCACTATAGTATTATATGCTAAATATGAAAGCAGTGCTGCCATCAGTTTCAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000389100.9 |
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| CDS-3UTR GCA 90 bp | AATGGAAGTCTTTGCTGCTTGGAATGCAAAATGGTACAGCCATTCTGGAAAACAGCCACTGAAAATCTTTaGAGCAGCATACTAGGATCA | + |
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Preference number: 4 (lower is better) Translates to: NGSLCCLECKMVQPFWKTATENL*SSILGS Trigger: TGATCCTAGTATGCTGCTGCAAAGATTTTCAGTGGC...TGTTTTCCAGAATGGCTGTACCATTTTGCATTCCAAGCAGCAAAGACTTCCATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000296615.10 |
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| CDS-3UTR GCA 90 bp | TTTTATTTTGAATGGCTACTGTGTGCTACATACCAGAAGAAACTGGTTTCTTTCGAAAAATTGGCTGAGTaGAGGAAGTCCAGAGGGGAG | + |
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Preference number: 4 (lower is better) Translates to: FYFEWLLCATYQKKLVSFEKLAE*RKSRGE Trigger: CTCCCCTCTGGACTTCCTGCACTCAGCCAATTTTTC...GAAAGAAACCAGTTTCTTCTGGTATGTAGCACACAGTAGCCATTCAAAATAAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000389100.9 |
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| CDS-3UTR GCA 90 bp | AAATGGAAGTCTTTGCTGCTTGGAATGCAAAATGGTACAGCCATTCTGGAAAACCCTGAGTATTTACCCTaGTTCTGTAGCCATCTTTCA | + |
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Preference number: 4 (lower is better) Translates to: KWKSLLLGMQNGTAILENPEYLP*FCSHLS Trigger: TGAAAGATGGCTACAGAAGCAGGGTAAATACTCAGG...GTTTTCCAGAATGGCTGTACCATTTTGCATTCCAAGCAGCAAAGACTTCCATTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000296615.10 |
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| CDS-3UTR GCA 90 bp | AAATGGAAGTCTTTGCTGCTTGGAATGCAAAATGGTACAGCCATTCTGGAAAACCTTTGCTGCTTGGAATaGAAAATGGTACAGCCATTC | + |
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Preference number: 4 (lower is better) Translates to: KWKSLLLGMQNGTAILENLCCLE*KMVQPF Trigger: GAATGGCTGTACCATTTTGCATTCCAAGCAGCAAAG...GTTTTCCAGAATGGCTGTACCATTTTGCATTCCAAGCAGCAAAGACTTCCATTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000296615.10 |
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| CDS-3UTR GCA 90 bp | AAGTCTTTGCTGCTTGGAATGCAAAATGGTACAGCCATTCTGGAAAACAATTTGGAGAATACCAGTGCTTaGTTTCAAGGACGCACAGAA | + |
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Preference number: 4 (lower is better) Translates to: KSLLLGMQNGTAILENNLENTSA*FQGRTE Trigger: TTCTGTGCGTCCTTGAAAGCAAGCACTGGTATTCTC...CAAATTGTTTTCCAGAATGGCTGTACCATTTTGCATTCCAAGCAGCAAAGACTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000296615.10 |
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| CDS-3UTR GCA 90 bp | GCTACTGTGTGCTACATACCAGAAGAAACTGGTTTCTTTCCATCTGAGATTTTAACAATGGGCATGGAGTaGTTGAAGGATTGTCTTTGG | + |
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Preference number: 4 (lower is better) Translates to: ATVCYIPEETGFFPSEILTMGME*LKDCLW Trigger: CCAAAGACAATCCTTCAAGCACTCCATGCCCATTGT...TAAAATCTCAGATGGAAAGAAACCAGTTTCTTCTGGTATGTAGCACACAGTAGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000389100.9 |
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| CDS-3UTR GCA 90 bp | GCTACTGTGTGCTACATACCAGAAGAAACTGGTTTCTTTCCATCTGAGATTTTAGATGAAATGCTTTTCTaGAGCTTGGTAGGGGCCATT | + |
|
Preference number: 4 (lower is better) Translates to: ATVCYIPEETGFFPSEILDEMLF*SLVGAI Trigger: AATGGCCCCTACCAAGCTGCAGAAAAGCATTTCATC...TAAAATCTCAGATGGAAAGAAACCAGTTTCTTCTGGTATGTAGCACACAGTAGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000389100.9 |
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| CDS-3UTR CCA 90 bp | AATGGAAGTCTTTGCTGCTTGGAATGCAAAATGGTACAGCCATTCTGGAAAACAGCAGCTTATCCATTCTaGAAGGGCTTCTACATTCAT | + |
|
Preference number: 4 (lower is better) Translates to: NGSLCCLECKMVQPFWKTAAYPF*KGFYIH Trigger: ATGAATGTAGAAGCCCTTCCAGAATGGATAAGCTGC...TGTTTTCCAGAATGGCTGTACCATTTTGCATTCCAAGCAGCAAAGACTTCCATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000296615.10 |
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| CDS-3UTR CCA 90 bp | AAATGGAAGTCTTTGCTGCTTGGAATGCAAAATGGTACAGCCATTCTGGAAAACGAAGTCTTTGCTGCTTaGAATGCAAAATGGTACAGC | + |
|
Preference number: 4 (lower is better) Translates to: KWKSLLLGMQNGTAILENEVFAA*NAKWYS Trigger: GCTGTACCATTTTGCATTCCAAGCAGCAAAGACTTC...GTTTTCCAGAATGGCTGTACCATTTTGCATTCCAAGCAGCAAAGACTTCCATTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000296615.10 |
||
| CDS-3UTR CCA 90 bp | AATGGAAGTCTTTGCTGCTTGGAATGCAAAATGGTACAGCCATTCTGGAAAACAGCCTCTCAAAAGTGCTaGGATTATAGACATAAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: NGSLCCLECKMVQPFWKTASQKC*DYRHKL Trigger: CAGCTTATGTCTATAATCCCAGCACTTTTGAGAGGC...TGTTTTCCAGAATGGCTGTACCATTTTGCATTCCAAGCAGCAAAGACTTCCATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000296615.10 |
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| CDS-3UTR TCA 90 bp | GTGAAACTGATGGCAGCACTGCTTTCATATTTAGCATATAATACTATAGTGGCATTGTCACAACCTGACTaGACTCTAGGATGTGACAAG | + |
|
Preference number: 4 (lower is better) Translates to: VKLMAALLSYLAYNTIVALSQPD*TLGCDK Trigger: CTTGTCACATCCTAGAGTTCAGTCAGGTTGTGACAA...TGCCACTATAGTATTATATGCTAAATATGAAAGCAGTGCTGCCATCAGTTTCAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000389100.9 |
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| CDS-3UTR TCA 90 bp | GTGAAACTGATGGCAGCACTGCTTTCATATTTAGCATATAATACTATAGTGGCAGCTTCTAGACCACACTaGAATTCTCCTCCTCTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: VKLMAALLSYLAYNTIVAASRPH*NSPPLC Trigger: ACAAAGAGGAGGAGAATTTCAGTGTGGTCTAGAAGC...TGCCACTATAGTATTATATGCTAAATATGAAAGCAGTGCTGCCATCAGTTTCAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000389100.9 |
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| CDS-3UTR TCA 90 bp | AAATGGAAGTCTTTGCTGCTTGGAATGCAAAATGGTACAGCCATTCTGGAAAACCTCTTATTAAGCCTCTaGTTAATGCTGCCCAATGAA | + |
|
Preference number: 4 (lower is better) Translates to: KWKSLLLGMQNGTAILENLLLSL*LMLPNE Trigger: TTCATTGGGCAGCATTAATCAGAGGCTTAATAAGAG...GTTTTCCAGAATGGCTGTACCATTTTGCATTCCAAGCAGCAAAGACTTCCATTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000296615.10 |
||
| CDS-3UTR GCA 90 bp | GTGAAACTGATGGCAGCACTGCTTTCATATTTAGCATATAATACTATAGTGGCAAACGTCCAGACACACTaGACAGATGTAGCTATCCTT | + |
|
Preference number: 4 (lower is better) Translates to: VKLMAALLSYLAYNTIVANVQTH*TDVAIL Trigger: AAGGATAGCTACATCTGTGCAGTGTGTCTGGACGTT...TGCCACTATAGTATTATATGCTAAATATGAAAGCAGTGCTGCCATCAGTTTCAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000389100.9 |
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| CDS-3UTR GCA 90 bp | TTTTATTTTGAATGGCTACTGTGTGCTACATACCAGAAGAAACTGGTTTCTTTCCTGGAGCTGCATGTCTaGGGAAACCTCCAAAAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: FYFEWLLCATYQKKLVSFLELHV*GNLQKD Trigger: ATCTTTTTGGAGGTTTCCGCAGACATGCAGCTCCAG...GAAAGAAACCAGTTTCTTCTGGTATGTAGCACACAGTAGCCATTCAAAATAAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000389100.9 |
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| CDS-3UTR CCA 90 bp | TTCTGTGAAGAATCAAAGACTCCAACTGTAATTGCATTTAATCAGAGAATGCTCTGTACAGCTGCAAGCTaGCCACAGGAACATTTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: FCEESKTPTVIAFNQRMLCTAAS*PQEHFG Trigger: TCCAAAATGTTCCTGTGGCCAGCTTGCAGCTGTACA...GAGCATTCTCTGATTAAATGCAATTACAGTTGGAGTCTTTGATTCTTCACAGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000389100.9 |
||
| CDS-3UTR CCA 90 bp | TTCTGTGAAGAATCAAAGACTCCAACTGTAATTGCATTTAATCAGAGAATGCTCCATCTCAAAATATGTTaGTCGCACCTCCAGGCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: FCEESKTPTVIAFNQRMLHLKIC*SHLQAE Trigger: CTCTGCCTGGAGGTGCGACCAACATATTTTGAGATG...GAGCATTCTCTGATTAAATGCAATTACAGTTGGAGTCTTTGATTCTTCACAGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000389100.9 |
||
| CDS-3UTR CCA 90 bp | GTGAAACTGATGGCAGCACTGCTTTCATATTTAGCATATAATACTATAGTGGCATGCCCAATGAAAAATTaGCTGAGTGCAGGAAGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: VKLMAALLSYLAYNTIVACPMKN*LSAGSP Trigger: TGGACTTCCTGCACTCAGCCAATTTTTCATTGGGCA...TGCCACTATAGTATTATATGCTAAATATGAAAGCAGTGCTGCCATCAGTTTCAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000389100.9 |
||
| CDS-3UTR CCA 90 bp | TTCTGTGAAGAATCAAAGACTCCAACTGTAATTGCATTTAATCAGAGAATGCTCTTGAAGGATTGTCTTTaGCCAGAGTCCGTAAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: FCEESKTPTVIAFNQRMLLKDCL*PESVSR Trigger: CCTGCTTACGGACTCTGGCCAAAGACAATCCTTCAA...GAGCATTCTCTGATTAAATGCAATTACAGTTGGAGTCTTTGATTCTTCACAGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000389100.9 |
||
| CDS-3UTR TCA 90 bp | AATGGAAGTCTTTGCTGCTTGGAATGCAAAATGGTACAGCCATTCTGGAAAACACTATGTGATTTTCTATaGAAAGCTCTTGTAGCGCAT | + |
|
Preference number: 4 (lower is better) Translates to: NGSLCCLECKMVQPFWKTLCDFL*KALVAH Trigger: ATGCGCTACAAGAGCTTTTCATAGAAAATCACATAG...TGTTTTCCAGAATGGCTGTACCATTTTGCATTCCAAGCAGCAAAGACTTCCATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000296615.10 |
||
| CDS-3UTR TCA 90 bp | AAATGGAAGTCTTTGCTGCTTGGAATGCAAAATGGTACAGCCATTCTGGAAAACCCAGCCCAAAAGATTTaGAGACACTTAACTAAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: KWKSLLLGMQNGTAILENPAQKI*RHLTKE Trigger: TTCTTTAGTTAAGTGTCTTCAAATCTTTTGGGCTGG...GTTTTCCAGAATGGCTGTACCATTTTGCATTCCAAGCAGCAAAGACTTCCATTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000296615.10 |
||
| CDS-3UTR GCA 90 bp | GTGAAACTGATGGCAGCACTGCTTTCATATTTAGCATATAATACTATAGTGGCACCTGAGTATTTACCCTaGTTCTGTAGCCATCTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: VKLMAALLSYLAYNTIVAPEYLP*FCSHLS Trigger: TGAAAGATGGCTACAGAAGCAGGGTAAATACTCAGG...TGCCACTATAGTATTATATGCTAAATATGAAAGCAGTGCTGCCATCAGTTTCAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000389100.9 |
||
| CDS-3UTR CCA 90 bp | TTTTATTTTGAATGGCTACTGTGTGCTACATACCAGAAGAAACTGGTTTCTTTCGTCCACTGGGCTTTTTaGATTAGGCAGCTTATCCAT | + |
|
Preference number: 4 (lower is better) Translates to: FYFEWLLCATYQKKLVSFVHWAF*IRQLIH Trigger: ATGGATAAGCTGCCTAATCCAAAAAGCCCAGTGGAC...GAAAGAAACCAGTTTCTTCTGGTATGTAGCACACAGTAGCCATTCAAAATAAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000389100.9 |
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| CDS-3UTR CCA 90 bp | AAGTCTTTGCTGCTTGGAATGCAAAATGGTACAGCCATTCTGGAAAACAATTTGTTGGTTCTGATGCTTTaGACAGCAGTTTTTCGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: KSLLLGMQNGTAILENNLLVLML*TAVFRS Trigger: AGAACGAAAAACTGCTGTCCAAAGCATCAGAACCAA...CAAATTGTTTTCCAGAATGGCTGTACCATTTTGCATTCCAAGCAGCAAAGACTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000296615.10 |
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| CDS-3UTR CCA 90 bp | GCTACTGTGTGCTACATACCAGAAGAAACTGGTTTCTTTCCATCTGAGATTTTATTGGTTCTGATGCTTTaGACAGCAGTTTTTCGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: ATVCYIPEETGFFPSEILLVLML*TAVFRS Trigger: AGAACGAAAAACTGCTGTCCAAAGCATCAGAACCAA...TAAAATCTCAGATGGAAAGAAACCAGTTTCTTCTGGTATGTAGCACACAGTAGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000389100.9 |
||
| CDS-3UTR CCA 90 bp | AAATGGAAGTCTTTGCTGCTTGGAATGCAAAATGGTACAGCCATTCTGGAAAACAGGATCAAAACTGGATaGATTCTGAAAGGAATAGCT | + |
|
Preference number: 4 (lower is better) Translates to: KWKSLLLGMQNGTAILENRIKTG*ILKGIA Trigger: AGCTATTCCTTTCAGAATCCATCCAGTTTTGATCCT...GTTTTCCAGAATGGCTGTACCATTTTGCATTCCAAGCAGCAAAGACTTCCATTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000296615.10 |
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| CDS-3UTR CCA 90 bp | AAGTCTTTGCTGCTTGGAATGCAAAATGGTACAGCCATTCTGGAAAACAATTTGGCTTGGAATGCAAAATaGTACAGCCATTCTGGAAAA | + |
|
Preference number: 4 (lower is better) Translates to: KSLLLGMQNGTAILENNLAWNAK*YSHSGK Trigger: TTTTCCAGAATGGCTGTACCATTTTGCATTCCAAGC...CAAATTGTTTTCCAGAATGGCTGTACCATTTTGCATTCCAAGCAGCAAAGACTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000296615.10 |
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| 3UTR CAA 72 bp | ATTGAAACTGTTAAAGCCCAGTTGATCCCAATGTTTTaGGATAGTGGTAGTATTTTTAGTGCCACGAGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: IETVKAQLIPMF*DSGSIFSATRE Trigger: CTCTCTCGTGGCACTAAAAATACTACCACTATCCAAAAACATTGGGATCAACTGGGCTTTAACAGTTTCAAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000389100.9 |
||
| CDS-3UTR TCA 90 bp | GTGAAACTGATGGCAGCACTGCTTTCATATTTAGCATATAATACTATAGTGGCACTCTTATTAAGCCTCTaGTTAATGCTGCCCAATGAA | + |
|
Preference number: 4 (lower is better) Translates to: VKLMAALLSYLAYNTIVALLLSL*LMLPNE Trigger: TTCATTGGGCAGCATTAATCAGAGGCTTAATAAGAG...TGCCACTATAGTATTATATGCTAAATATGAAAGCAGTGCTGCCATCAGTTTCAC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000389100.9 |
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| CDS-3UTR TCA 90 bp | GCTACTGTGTGCTACATACCAGAAGAAACTGGTTTCTTTCCATCTGAGATTTTACCATGTATTTTATTTTaGATGGCTACTGTGTGCTAC | + |
|
Preference number: 4 (lower is better) Translates to: ATVCYIPEETGFFPSEILPCILF*MATVCY Trigger: GTAGCACACAGTAGCCATTCAAAATAAAATACATGG...TAAAATCTCAGATGGAAAGAAACCAGTTTCTTCTGGTATGTAGCACACAGTAGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000389100.9 |
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| CDS-3UTR GCA 90 bp | TTTTATTTTGAATGGCTACTGTGTGCTACATACCAGAAGAAACTGGTTTCTTTCGCCACTGAAAATCTTTaGAGCAGCATACTAGGATCA | + |
|
Preference number: 4 (lower is better) Translates to: FYFEWLLCATYQKKLVSFATENL*SSILGS Trigger: TGATCCTAGTATGCTGCTGCAAAGATTTTCAGTGGC...GAAAGAAACCAGTTTCTTCTGGTATGTAGCACACAGTAGCCATTCAAAATAAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000389100.9 |
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| CDS-3UTR GCA 90 bp | AAGTCTTTGCTGCTTGGAATGCAAAATGGTACAGCCATTCTGGAAAACAATTTGAATGGAAGTCTTTGCTaGTTGGAATGCAAAATGGTA | + |
|
Preference number: 4 (lower is better) Translates to: KSLLLGMQNGTAILENNLNGSLC*LECKMV Trigger: TACCATTTTGCATTCCAAGCAGCAAAGACTTCCATT...CAAATTGTTTTCCAGAATGGCTGTACCATTTTGCATTCCAAGCAGCAAAGACTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000296615.10 |
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| CDS-3UTR CCA 90 bp | TTCTGTGAAGAATCAAAGACTCCAACTGTAATTGCATTTAATCAGAGAATGCTCGCAGCTTATCCATTCTaGAAGGGCTTCTACATTCAT | + |
|
Preference number: 4 (lower is better) Translates to: FCEESKTPTVIAFNQRMLAAYPF*KGFYIH Trigger: ATGAATGTAGAAGCCCTTCCAGAATGGATAAGCTGC...GAGCATTCTCTGATTAAATGCAATTACAGTTGGAGTCTTTGATTCTTCACAGAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000389100.9 |
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| CDS-3UTR CCA 90 bp | GCTACTGTGTGCTACATACCAGAAGAAACTGGTTTCTTTCCATCTGAGATTTTAAGGATCAAAACTGGATaGATTCTGAAAGGAATAGCT | + |
|
Preference number: 4 (lower is better) Translates to: ATVCYIPEETGFFPSEILRIKTG*ILKGIA Trigger: AGCTATTCCTTTCAGAATCCATCCAGTTTTGATCCT...TAAAATCTCAGATGGAAAGAAACCAGTTTCTTCTGGTATGTAGCACACAGTAGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000389100.9 |
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| CDS-3UTR TCA 90 bp | GTGAAACTGATGGCAGCACTGCTTTCATATTTAGCATATAATACTATAGTGGCAAACACATATAAGGGTTaGAATAAACGTCCAGACACA | + |
|
Preference number: 4 (lower is better) Translates to: VKLMAALLSYLAYNTIVANTYKG*NKRPDT Trigger: TGTGTCTGGACGTTTATTTCAACCCTTATATGTGTT...TGCCACTATAGTATTATATGCTAAATATGAAAGCAGTGCTGCCATCAGTTTCAC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000389100.9 |
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| CDS-3UTR TCA 90 bp | GTGAAACTGATGGCAGCACTGCTTTCATATTTAGCATATAATACTATAGTGGCACTCTTTATTGGACAGTaGGTTTTTACTGTGAGAGAT | + |
|
Preference number: 4 (lower is better) Translates to: VKLMAALLSYLAYNTIVALFIGQ*VFTVRD Trigger: ATCTCTCACAGTAAAAACTCACTGTCCAATAAAGAG...TGCCACTATAGTATTATATGCTAAATATGAAAGCAGTGCTGCCATCAGTTTCAC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000389100.9 |
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| CDS-3UTR TCA 90 bp | TTTTATTTTGAATGGCTACTGTGTGCTACATACCAGAAGAAACTGGTTTCTTTCAAACCTCCAAAAAGATaGAATGCTTTTCTGCAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: FYFEWLLCATYQKKLVSFKPPKR*NAFLQL Trigger: AAGCTGCAGAAAAGCATTTCATCTTTTTGGAGGTTT...GAAAGAAACCAGTTTCTTCTGGTATGTAGCACACAGTAGCCATTCAAAATAAAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000389100.9 |
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| CDS-3UTR GCA 90 bp | GTGAAACTGATGGCAGCACTGCTTTCATATTTAGCATATAATACTATAGTGGCATTACATTTTGGACCATaGATTGCTCTTTTAGACTAC | + |
|
Preference number: 4 (lower is better) Translates to: VKLMAALLSYLAYNTIVALHFGP*IALLDY Trigger: GTAGTCTAAAAGAGCAATGCATGGTCCAAAATGTAA...TGCCACTATAGTATTATATGCTAAATATGAAAGCAGTGCTGCCATCAGTTTCAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000389100.9 |
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| CDS-3UTR GCA 90 bp | TTTTATTTTGAATGGCTACTGTGTGCTACATACCAGAAGAAACTGGTTTCTTTCACTGGAATTTTGTTATaGCACAGAGCTAACTTAGGA | + |
|
Preference number: 4 (lower is better) Translates to: FYFEWLLCATYQKKLVSFTGILL*HRANLG Trigger: TCCTAAGTTAGCTCTGTGGCATAACAAAATTCCAGT...GAAAGAAACCAGTTTCTTCTGGTATGTAGCACACAGTAGCCATTCAAAATAAAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000389100.9 |
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| CDS-3UTR CCA 90 bp | GTGAAACTGATGGCAGCACTGCTTTCATATTTAGCATATAATACTATAGTGGCAAATGACAGTGTTTTCTaGCTTCAACTACAGAATTCT | + |
|
Preference number: 4 (lower is better) Translates to: VKLMAALLSYLAYNTIVANDSVF*LQLQNS Trigger: AGAATTCTGTAGTTGAAGCCAGAAAACACTGTCATT...TGCCACTATAGTATTATATGCTAAATATGAAAGCAGTGCTGCCATCAGTTTCAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000389100.9 |
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| CDS CCA 90 bp | AAATTGGCTGAGTGCAGGAAGTCCAGAGGGGAGAGGTGCTCTTCCTaGTCTGAGGCCTCCGGCATGCTCCTGCCAGCTGAGGGCAGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: KLAECRKSRGERCSS*SEASGMLLPAEGRS Trigger: GGACCTGCCCTCAGCTGGCAGGAGCATGCCGGAGGCCTCAGACCAGGAAGAGCACCTCTCCCCTCTGGACTTCCTGCACTCAGCCAATTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000296615.10 ENST00000389100.9 |
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| CDS GCA 90 bp | AGTCCAGAGGGGAGAGGTGCTCTTCCTGGTCTGAGGCCTCCGGCATaGTCCTGCCAGCTGAGGGCAGGTCCATCAGGAAAGTCAGATTGT | + |
|
Preference number: 5 (lower is better) Translates to: SPEGRGALPGLRPPA*SCQLRAGPSGKSDC Trigger: ACAATCTGACTTTCCTGATGGACCTGCCCTCAGCTGGCAGGAGCATGCCGGAGGCCTCAGACCAGGAAGAGCACCTCTCCCCTCTGGACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000296615.10 ENST00000389100.9 |
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| CDS GCA 90 bp | CCCAATGAAAAATTGGCTGAGTGCAGGAAGTCCAGAGGGGAGAGGTaGTCTTCCTGGTCTGAGGCCTCCGGCATGCTCCTGCCAGCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: PNEKLAECRKSRGER*SSWSEASGMLLPAE Trigger: CTCAGCTGGCAGGAGCATGCCGGAGGCCTCAGACCAGGAAGAGCACCTCTCCCCTCTGGACTTCCTGCACTCAGCCAATTTTTCATTGGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000296615.10 ENST00000389100.9 |
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| CDS GCA 90 bp | CCATCCACGGCTATCATCCTCAAAGTGCAGGTAATCCATCCTGTGTaGACCGTGTGGGAACTGCCTTCTTGTAACTGGAGCTGCATGTCT | + |
|
Preference number: 5 (lower is better) Translates to: PSTAIILKVQVIHPV*TVWELPSCNWSCMS Trigger: AGACATGCAGCTCCAGTTACAAGAAGGCAGTTCCCACACGGTGCACACAGGATGGATTACCTGCACTTTGAGGATGATAGCCGTGGATGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000389100.9 |
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| CDS CCA 90 bp | GCTATCATCCTCAAAGTGCAGGTAATCCATCCTGTGTGCACCGTGTaGGAACTGCCTTCTTGTAACTGGAGCTGCATGTCTGCGGAAACC | + |
|
Preference number: 5 (lower is better) Translates to: AIILKVQVIHPVCTV*ELPSCNWSCMSAET Trigger: GGTTTCCGCAGACATGCAGCTCCAGTTACAAGAAGGCAGTTCCCACACGGTGCACACAGGATGGATTACCTGCACTTTGAGGATGATAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000389100.9 |
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| CDS CCA 90 bp | TCATTAGTCTGCCTGCCTGTGTTGGCTGATAATCAGTCCGGCTCTTaGAGAGATGTACAGCTGCAAGCTGGCCACAGGAACATTTTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: SLVCLPVLADNQSGS*RDVQLQAGHRNILE Trigger: CTCCAAAATGTTCCTGTGGCCAGCTTGCAGCTGTACATCTCTCCAAGAGCCGGACTGATTATCAGCCAACACAGGCAGGCAGACTAATGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000296615.10 ENST00000389100.9 |
||
| CDS CCA 90 bp | GTAATCCATCCTGTGTGCACCGTGTGGGAACTGCCTTCTTGTAACTaGAGCTGCATGTCTGCGGAAACCTCCAAAAAGATGAAATGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: VIHPVCTVWELPSCN*SCMSAETSKKMKCF Trigger: AAAGCATTTCATCTTTTTGGAGGTTTCCGCAGACATGCAGCTCCAGTTACAAGAAGGCAGTTCCCACACGGTGCACACAGGATGGATTAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000389100.9 |
||
| CDS TCA 90 bp | TCAGAGCCACCACCTGTCAGCAGAGCTTCCTTGTCACAACCTGACTaGACTCTAGGATGTGACAAGTATTTCACTGATGGTCTCATTAGT | + |
|
Preference number: 5 (lower is better) Translates to: SEPPPVSRASLSQPD*TLGCDKYFTDGLIS Trigger: ACTAATGAGACCATCAGTGAAATACTTGTCACATCCTAGAGTTCAGTCAGGTTGTGACAAGGAAGCTCTGCTGACAGGTGGTGGCTCTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000296615.10 ENST00000389100.9 |
||
| CDS-3UTR CAA 90 bp | AAGTCTTTGCTGCTTGGAATGCAAAATGGTACAGCCATTCTGGAAAACAATTTGGTCTGCCTGCCTGTGTaGGCTGATAATCAGTCCGGC | + |
|
Preference number: 5 (lower is better) Translates to: KSLLLGMQNGTAILENNLVCLPV*ADNQSG Trigger: GCCGGACTGATTATCAGCCAACACAGGCAGGCAGAC...CAAATTGTTTTCCAGAATGGCTGTACCATTTTGCATTCCAAGCAGCAAAGACTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000296615.10 |
||
| CDS-3UTR CAA 90 bp | GCTACTGTGTGCTACATACCAGAAGAAACTGGTTTCTTTCCATCTGAGATTTTAGTCTGCCTGCCTGTGTaGGCTGATAATCAGTCCGGC | + |
|
Preference number: 5 (lower is better) Translates to: ATVCYIPEETGFFPSEILVCLPV*ADNQSG Trigger: GCCGGACTGATTATCAGCCAACACAGGCAGGCAGAC...TAAAATCTCAGATGGAAAGAAACCAGTTTCTTCTGGTATGTAGCACACAGTAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000389100.9 |
||
| CDS TCA 90 bp | AGGGCTCACAGAAGATGTGATGGCAAGGGTAACACATATAAGGGTTaGAATAAACGTCCAGACACACTGCACAGATGTAGCTATCCTTTT | + |
|
Preference number: 5 (lower is better) Translates to: RAHRRCDGKGNTYKG*NKRPDTLHRCSYPF Trigger: AAAAGGATAGCTACATCTGTGCAGTGTGTCTGGACGTTTATTTCAACCCTTATATGTGTTACCCTTGCCATCACATCTTCTGTGAGCCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000389100.9 |
||
| CDS-3UTR CAA 90 bp | AATGGAAGTCTTTGCTGCTTGGAATGCAAAATGGTACAGCCATTCTGGAAAACATCATCTCAAAATATGTaGGTCGCACCTCCAGGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: NGSLCCLECKMVQPFWKTSSQNM*VAPPGR Trigger: TCTGCCTGGAGGTGCGACCAACATATTTTGAGATGA...TGTTTTCCAGAATGGCTGTACCATTTTGCATTCCAAGCAGCAAAGACTTCCATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000296615.10 |
||
| CDS-3UTR CAA 90 bp | AAGTCTTTGCTGCTTGGAATGCAAAATGGTACAGCCATTCTGGAAAACAATTTGAAATTCTCCTCCTCTTaGTGTCTGGGTCTCATGGGG | + |
|
Preference number: 5 (lower is better) Translates to: KSLLLGMQNGTAILENNLKFSSS*CLGLMG Trigger: CCCCATGAGACCCAGACACAAAGAGGAGGAGAATTT...CAAATTGTTTTCCAGAATGGCTGTACCATTTTGCATTCCAAGCAGCAAAGACTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000296615.10 |
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| CDS-3UTR CAA 90 bp | AAGTCTTTGCTGCTTGGAATGCAAAATGGTACAGCCATTCTGGAAAACAATTTGCTGCCCAATGAAAAATaGGCTGAGTGCAGGAAGTCC | + |
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Preference number: 5 (lower is better) Translates to: KSLLLGMQNGTAILENNLLPNEK*AECRKS Trigger: GGACTTCCTGCACTCAGCCAATTTTTCATTGGGCAG...CAAATTGTTTTCCAGAATGGCTGTACCATTTTGCATTCCAAGCAGCAAAGACTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000296615.10 |
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| CDS-3UTR CAA 90 bp | GCTACTGTGTGCTACATACCAGAAGAAACTGGTTTCTTTCCATCTGAGATTTTACTGCCCAATGAAAAATaGGCTGAGTGCAGGAAGTCC | + |
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Preference number: 5 (lower is better) Translates to: ATVCYIPEETGFFPSEILLPNEK*AECRKS Trigger: GGACTTCCTGCACTCAGCCAATTTTTCATTGGGCAG...TAAAATCTCAGATGGAAAGAAACCAGTTTCTTCTGGTATGTAGCACACAGTAGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000389100.9 |
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| CDS-3UTR CAA 90 bp | AAATGGAAGTCTTTGCTGCTTGGAATGCAAAATGGTACAGCCATTCTGGAAAACGGAAGTCTTTGCTGCTaGGAATGCAAAATGGTACAG | + |
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Preference number: 5 (lower is better) Translates to: KWKSLLLGMQNGTAILENGSLCC*ECKMVQ Trigger: CTGTACCATTTTGCATTCCAAGCAGCAAAGACTTCC...GTTTTCCAGAATGGCTGTACCATTTTGCATTCCAAGCAGCAAAGACTTCCATTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000296615.10 |
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| CDS-3UTR CAA 90 bp | GTGAAACTGATGGCAGCACTGCTTTCATATTTAGCATATAATACTATAGTGGCACTTGAAGGATTGTCTTaGGCCAGAGTCCGTAAGCAG | + |
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Preference number: 5 (lower is better) Translates to: VKLMAALLSYLAYNTIVALEGLS*ARVRKQ Trigger: CTGCTTACGGACTCTGGCCAAAGACAATCCTTCAAG...TGCCACTATAGTATTATATGCTAAATATGAAAGCAGTGCTGCCATCAGTTTCAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000389100.9 |
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| CDS-3UTR CAA 90 bp | TTCTGTGAAGAATCAAAGACTCCAACTGTAATTGCATTTAATCAGAGAATGCTCGGAGTGCTTGAAGGATaGTCTTTGGCCAGAGTCCGT | + |
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Preference number: 5 (lower is better) Translates to: FCEESKTPTVIAFNQRMLGVLEG*SLARVR Trigger: ACGGACTCTGGCCAAAGACAATCCTTCAAGCACTCC...GAGCATTCTCTGATTAAATGCAATTACAGTTGGAGTCTTTGATTCTTCACAGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000389100.9 |
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| CDS TCA 90 bp | CTTCTTAGATTCTTCAACTTGCTCCTTTCTCTCTTATTAAGCCTCTaGTTAATGCTGCCCAATGAAAAATTGGCTGAGTGCAGGAAGTCC | + |
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Preference number: 5 (lower is better) Translates to: LLRFFNLLLSLLLSL*LMLPNEKLAECRKS Trigger: GGACTTCCTGCACTCAGCCAATTTTTCATTGGGCAGCATTAATCAGAGGCTTAATAAGAGAGAAAGGAGCAAGTTGAAGAATCTAAGAAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000296615.10 ENST00000389100.9 |
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| CDS-3UTR CAA 90 bp | AATGGAAGTCTTTGCTGCTTGGAATGCAAAATGGTACAGCCATTCTGGAAAACATTTGGTTCTGATGCTTaGGACAGCAGTTTTTCGTTC | + |
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Preference number: 5 (lower is better) Translates to: NGSLCCLECKMVQPFWKTFGSDA*DSSFSF Trigger: GAACGAAAAACTGCTGTCCAAAGCATCAGAACCAAA...TGTTTTCCAGAATGGCTGTACCATTTTGCATTCCAAGCAGCAAAGACTTCCATT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000296615.10 |
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| CDS-3UTR CAA 90 bp | TTCTGTGAAGAATCAAAGACTCCAACTGTAATTGCATTTAATCAGAGAATGCTCAAATTCTCCTCCTCTTaGTGTCTGGGTCTCATGGGG | + |
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Preference number: 5 (lower is better) Translates to: FCEESKTPTVIAFNQRMLKFSSS*CLGLMG Trigger: CCCCATGAGACCCAGACACAAAGAGGAGGAGAATTT...GAGCATTCTCTGATTAAATGCAATTACAGTTGGAGTCTTTGATTCTTCACAGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000389100.9 |
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| CDS-3UTR CAA 90 bp | TTTTATTTTGAATGGCTACTGTGTGCTACATACCAGAAGAAACTGGTTTCTTTCATGGGCATGGAGTGCTaGAAGGATTGTCTTTGGCCA | + |
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Preference number: 5 (lower is better) Translates to: FYFEWLLCATYQKKLVSFMGMEC*KDCLWP Trigger: TGGCCAAAGACAATCCTTCAAGCACTCCATGCCCAT...GAAAGAAACCAGTTTCTTCTGGTATGTAGCACACAGTAGCCATTCAAAATAAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000389100.9 |
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| CDS GCA 90 bp | GCAAGGGTAACACATATAAGGGTTGAAATAAACGTCCAGACACACTaGACAGATGTAGCTATCCTTTTCTTCTGCATATTCATTGTCTTC | + |
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Preference number: 5 (lower is better) Translates to: ARVTHIRVEINVQTH*TDVAILFFCIFIVF Trigger: GAAGACAATGAATATGCAGAAGAAAAGGATAGCTACATCTGTGCAGTGTGTCTGGACGTTTATTTCAACCCTTATATGTGTTACCCTTGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000389100.9 |
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| CDS-3UTR CAA 90 bp | TTTTATTTTGAATGGCTACTGTGTGCTACATACCAGAAGAAACTGGTTTCTTTCTCATCTCAAAATATGTaGGTCGCACCTCCAGGCAGA | + |
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Preference number: 5 (lower is better) Translates to: FYFEWLLCATYQKKLVSFSSQNM*VAPPGR Trigger: TCTGCCTGGAGGTGCGACCAACATATTTTGAGATGA...GAAAGAAACCAGTTTCTTCTGGTATGTAGCACACAGTAGCCATTCAAAATAAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000389100.9 |
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| CDS-3UTR CAA 90 bp | GTGAAACTGATGGCAGCACTGCTTTCATATTTAGCATATAATACTATAGTGGCATTGGTAGGGGCCATTTaGCAGAGTTGGATTTCTGAA | + |
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Preference number: 5 (lower is better) Translates to: VKLMAALLSYLAYNTIVALVGAI*QSWISE Trigger: TTCAGAAATCCAACTCTGCAAAATGGCCCCTACCAA...TGCCACTATAGTATTATATGCTAAATATGAAAGCAGTGCTGCCATCAGTTTCAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000389100.9 |
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| CDS-3UTR CAA 90 bp | AATGGAAGTCTTTGCTGCTTGGAATGCAAAATGGTACAGCCATTCTGGAAAACAAGAAAATGGAAGTCTTaGCTGCTTGGAATGCAAAAT | + |
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Preference number: 5 (lower is better) Translates to: NGSLCCLECKMVQPFWKTRKWKS*LLGMQN Trigger: ATTTTGCATTCCAAGCAGCAAAGACTTCCATTTTCT...TGTTTTCCAGAATGGCTGTACCATTTTGCATTCCAAGCAGCAAAGACTTCCATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000296615.10 |
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| CDS-3UTR CAA 90 bp | TTCTGTGAAGAATCAAAGACTCCAACTGTAATTGCATTTAATCAGAGAATGCTCCCAGTTTTTCCTTTTTaGAATTGGGTTACCTGCCCC | + |
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Preference number: 5 (lower is better) Translates to: FCEESKTPTVIAFNQRMLPVFPF*NWVTCP Trigger: GGGGCAGGTAACCCAATTCAAAAAAGGAAAAACTGG...GAGCATTCTCTGATTAAATGCAATTACAGTTGGAGTCTTTGATTCTTCACAGAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000389100.9 |
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| CDS-3UTR CAA 90 bp | GTGAAACTGATGGCAGCACTGCTTTCATATTTAGCATATAATACTATAGTGGCACCATTCCTGATTTTGTaGATTCAGAGTGGTAGAAGC | + |
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Preference number: 5 (lower is better) Translates to: VKLMAALLSYLAYNTIVAPFLIL*IQSGRS Trigger: GCTTCTACCACTCTGAATCAACAAAATCAGGAATGG...TGCCACTATAGTATTATATGCTAAATATGAAAGCAGTGCTGCCATCAGTTTCAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000389100.9 |
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| CDS-3UTR CAA 90 bp | GTGAAACTGATGGCAGCACTGCTTTCATATTTAGCATATAATACTATAGTGGCATTCTTTGGCTCTTTATaGGACAGTGAGTTTTTACTG | + |
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Preference number: 5 (lower is better) Translates to: VKLMAALLSYLAYNTIVAFFGSL*DSEFLL Trigger: CAGTAAAAACTCACTGTCCAATAAAGAGCCAAAGAA...TGCCACTATAGTATTATATGCTAAATATGAAAGCAGTGCTGCCATCAGTTTCAC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000389100.9 |
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| CDS TCA 90 bp | ATAGCAAAGAAAGCAGAAAACAATGAATCCAATGACCCAGTTCACTaGATAAATATATATGATCACCATATCCATGTCAAACCACCATCC | + |
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Preference number: 5 (lower is better) Translates to: IAKKAENNESNDPVH*INIYDHHIHVKPPS Trigger: GGATGGTGGTTTGACATGGATATGGTGATCATATATATTTATTCAGTGAACTGGGTCATTGGATTCATTGTTTTCTGCTTTCTTTGCTAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000389100.9 |
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| CDS-3UTR CAA 90 bp | TTTTATTTTGAATGGCTACTGTGTGCTACATACCAGAAGAAACTGGTTTCTTTCTTTCCATTCCTGATTTaGTTGATTCAGAGTGGTAGA | + |
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Preference number: 5 (lower is better) Translates to: FYFEWLLCATYQKKLVSFFPFLI*LIQSGR Trigger: TCTACCACTCTGAATCAACAAAATCAGGAATGGAAA...GAAAGAAACCAGTTTCTTCTGGTATGTAGCACACAGTAGCCATTCAAAATAAAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000389100.9 |
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| CDS CAA 72 bp | CGACACAATGGGCATGGAGTGCTTGAAGGATTGTCTTaGGCCAGAGTCCGTAAGCAGGGCTCACAGAAGATG | + |
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Preference number: 6 (lower is better) Translates to: RHNGHGVLEGLS*ARVRKQGSQKM Trigger: CATCTTCTGTGAGCCCTGCTTACGGACTCTGGCCAAAGACAATCCTTCAAGCACTCCATGCCCATTGTGTCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000389100.9 |
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| CDS CAA 72 bp | ATTGTCCGACACAATGGGCATGGAGTGCTTGAAGGATaGTCTTTGGCCAGAGTCCGTAAGCAGGGCTCACAG | + |
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Preference number: 6 (lower is better) Translates to: IVRHNGHGVLEG*SLARVRKQGSQ Trigger: CTGTGAGCCCTGCTTACGGACTCTGGCCAAAGACAATCCTTCAAGCACTCCATGCCCATTGTGTCGGACAAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000389100.9 |
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| CDS GCA 72 bp | GCTATCATCCTCAAAGTGCAGGTAATCCATCCTGTGTaGACCGTGTGGGAACTGCCTTCTTGTAACTGGAGC | + |
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Preference number: 6 (lower is better) Translates to: AIILKVQVIHPV*TVWELPSCNWS Trigger: GCTCCAGTTACAAGAAGGCAGTTCCCACACGGTGCACACAGGATGGATTACCTGCACTTTGAGGATGATAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000389100.9 |
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| CDS CCA 72 bp | CTCAAAGTGCAGGTAATCCATCCTGTGTGCACCGTGTaGGAACTGCCTTCTTGTAACTGGAGCTGCATGTCT | + |
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Preference number: 6 (lower is better) Translates to: LKVQVIHPVCTV*ELPSCNWSCMS Trigger: AGACATGCAGCTCCAGTTACAAGAAGGCAGTTCCCACACGGTGCACACAGGATGGATTACCTGCACTTTGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000389100.9 |
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| CDS GCA 72 bp | TGCACCGTGTGGGAACTGCCTTCTTGTAACTGGAGCTaGATGTCTGCGGAAACCTCCAAAAAGATGAAATGC | + |
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Preference number: 6 (lower is better) Translates to: CTVWELPSCNWS*MSAETSKKMKC Trigger: GCATTTCATCTTTTTGGAGGTTTCCGCAGACATGCAGCTCCAGTTACAAGAAGGCAGTTCCCACACGGTGCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000389100.9 |
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| CDS CAA 90 bp | GTGACAAGTATTTCACTGATGGTCTCATTAGTCTGCCTGCCTGTGTaGGCTGATAATCAGTCCGGCTCTTGGAGAGATGTACAGCTGCAA | + |
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Preference number: 6 (lower is better) Translates to: VTSISLMVSLVCLPV*ADNQSGSWRDVQLQ Trigger: TTGCAGCTGTACATCTCTCCAAGAGCCGGACTGATTATCAGCCAACACAGGCAGGCAGACTAATGAGACCATCAGTGAAATACTTGTCAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000296615.10 ENST00000389100.9 |
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| CDS CAA 90 bp | GGCATGCTCCTGCCAGCTGAGGGCAGGTCCATCAGGAAAGTCAGATaGTTAGTATTAGTATGGTCAGAATACACTGAAGCAGCTTCTAGA | + |
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Preference number: 6 (lower is better) Translates to: GMLLPAEGRSIRKVR*LVLVWSEYTEAASR Trigger: TCTAGAAGCTGCTTCAGTGTATTCTGACCATACTAATACTAACAATCTGACTTTCCTGATGGACCTGCCCTCAGCTGGCAGGAGCATGCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000296615.10 ENST00000389100.9 |
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| CDS TCA 72 bp | CCACCTGTCAGCAGAGCTTCCTTGTCACAACCTGACTaGACTCTAGGATGTGACAAGTATTTCACTGATGGT | + |
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Preference number: 6 (lower is better) Translates to: PPVSRASLSQPD*TLGCDKYFTDG Trigger: ACCATCAGTGAAATACTTGTCACATCCTAGAGTTCAGTCAGGTTGTGACAAGGAAGCTCTGCTGACAGGTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000296615.10 ENST00000389100.9 |
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| CDS CAA 72 bp | ATTTCACTGATGGTCTCATTAGTCTGCCTGCCTGTGTaGGCTGATAATCAGTCCGGCTCTTGGAGAGATGTA | + |
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Preference number: 6 (lower is better) Translates to: ISLMVSLVCLPV*ADNQSGSWRDV Trigger: TACATCTCTCCAAGAGCCGGACTGATTATCAGCCAACACAGGCAGGCAGACTAATGAGACCATCAGTGAAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000296615.10 ENST00000389100.9 |
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| CDS CAA 90 bp | CTGATGCTTTGGACAGCAGTTTTTCGTTCTTCATCTCAAAATATGTaGGTCGCACCTCCAGGCAGAGTGCTTCTGTTAATCTTCCAGGGT | + |
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Preference number: 6 (lower is better) Translates to: LMLWTAVFRSSSQNM*VAPPGRVLLLIFQG Trigger: ACCCTGGAAGATTAACAGAAGCACTCTGCCTGGAGGTGCGACCAACATATTTTGAGATGAAGAACGAAAAACTGCTGTCCAAAGCATCAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000296615.10 ENST00000389100.9 |
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| CDS CAA 72 bp | CTGCCAGCTGAGGGCAGGTCCATCAGGAAAGTCAGATaGTTAGTATTAGTATGGTCAGAATACACTGAAGCA | + |
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Preference number: 6 (lower is better) Translates to: LPAEGRSIRKVR*LVLVWSEYTEA Trigger: TGCTTCAGTGTATTCTGACCATACTAATACTAACAATCTGACTTTCCTGATGGACCTGCCCTCAGCTGGCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000296615.10 ENST00000389100.9 |
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| CDS CAA 72 bp | TGGACAGCAGTTTTTCGTTCTTCATCTCAAAATATGTaGGTCGCACCTCCAGGCAGAGTGCTTCTGTTAATC | + |
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Preference number: 6 (lower is better) Translates to: WTAVFRSSSQNM*VAPPGRVLLLI Trigger: GATTAACAGAAGCACTCTGCCTGGAGGTGCGACCAACATATTTTGAGATGAAGAACGAAAAACTGCTGTCCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000296615.10 ENST00000389100.9 |
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| CDS TCA 72 bp | AGAAGATGTGATGGCAAGGGTAACACATATAAGGGTTaGAATAAACGTCCAGACACACTGCACAGATGTAGC | + |
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Preference number: 6 (lower is better) Translates to: RRCDGKGNTYKG*NKRPDTLHRCS Trigger: GCTACATCTGTGCAGTGTGTCTGGACGTTTATTTCAACCCTTATATGTGTTACCCTTGCCATCACATCTTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000389100.9 |
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| CDS CCA 72 bp | AGGTCCATCAGGAAAGTCAGATTGTTAGTATTAGTATaGTCAGAATACACTGAAGCAGCTTCTAGACCACAC | + |
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Preference number: 6 (lower is better) Translates to: RSIRKVRLLVLV*SEYTEAASRPH Trigger: GTGTGGTCTAGAAGCTGCTTCAGTGTATTCTGACCATACTAATACTAACAATCTGACTTTCCTGATGGACCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000296615.10 ENST00000389100.9 |
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| CDS TCA 72 bp | TCTTCATCTGTACTCATCTCATTATTCAAAGTCATATaGTCCAGCAATCCCACTCCTGAGTATTTACCCTGC | + |
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Preference number: 6 (lower is better) Translates to: SSSVLISLFKVI*SSNPTPEYLPC Trigger: GCAGGGTAAATACTCAGGAGTGGGATTGCTGGATCATATGACTTTGAATAATGAGATGAGTACAGATGAAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000389100.9 |
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