RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RNF170 (Homo sapiens)

Ensembl gene IDs: ENSG00000120925

Ensembl transcript IDs: ENST00000240159.8, ENST00000319073.5, ENST00000319104.7, ENST00000524954.1, ENST00000526349.5, ENST00000527424.6, ENST00000528318.5, ENST00000531440.5, ENST00000534961.5

Found 340 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GAAATGGCTATTGTGCGAAGATCTGGAGTTGGTGAGAGTTGGCTGTaGGGATGCCCGGCGGAGGAGCCTAGCAGTCAGAGGGACTGGCCA +
Preference number: 1 (lower is better)
Translates to: EMAIVRRSGVGESWL*GCPAEEPSSQRDWP
Trigger: TGGCCAGTCCCTCTGACTGCTAGGCTCCTCCGCCGGGCATCCTCACAGCCAACTCTCACCAACTCCAGATCTTCGCACAATAGCCATTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319104.7
3UTR TCA 90 bp TGTGGGAAAGGGAGAGCAGGCTTTCCAGCAGAGTCACACTTGAGATaGTCATCGGGCTGCGTTGCATGTAGGGAGCCAGGCACTTGGTGC +
Preference number: 1 (lower is better)
Translates to: CGKGRAGFPAESHLR*SSGCVACREPGTWC
Trigger: GCACCAAGTGCCTGGCTCCCTACATGCAACGCAGCCCGATGATCATCTCAAGTGTGACTCTGCTGGAAAGCCTGCTCTCCCTTTCCCACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319104.7
3UTR CCA 90 bp GGCGTCTTCAGCCTGCTCAAAGGACAGCAAGGAGGGCTGGATGGCTaGAGCAGAGTGAGCTGTGGGGACAAATGTGAGATGAGGTTAGAG +
Preference number: 1 (lower is better)
Translates to: GVFSLLKGQQGGLDG*SRVSCGDKCEMRLE
Trigger: CTCTAACCTCATCTCACATTTGTCCCCACAGCTCACTCTGCTCCAGCCATCCAGCCCTCCTTGCTGTCCTTTGAGCAGGCTGAAGACGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319104.7
3UTR TCA 90 bp TACTCTGTGGGAAAGGGAGAGCAGGCTTTCCAGCAGAGTCACACTTaGGATGATCATCGGGCTGCGTTGCATGTAGGGAGCCAGGCACTT +
Preference number: 1 (lower is better)
Translates to: YSVGKGEQAFQQSHT*DDHRAALHVGSQAL
Trigger: AAGTGCCTGGCTCCCTACATGCAACGCAGCCCGATGATCATCTCAAGTGTGACTCTGCTGGAAAGCCTGCTCTCCCTTTCCCACAGAGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319104.7
3UTR TCA 90 bp AGAGTGAGCTGTGGGGACAAATGTGAGATGAGGTTAGAGAGGAAATaGGCAACCAAGGTCACATGGGGCCTTGCAGGCTGGCGTGAGGAC +
Preference number: 1 (lower is better)
Translates to: RVSCGDKCEMRLERK*ATKVTWGLAGWRED
Trigger: GTCCTCACGCCAGCCTGCAAGGCCCCATGTGACCTTGGTTGCTCATTTCCTCTCTAACCTCATCTCACATTTGTCCCCACAGCTCACTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319104.7
3UTR CCA 90 bp ACATGGGGCCTTGCAGGCTGGCGTGAGGACTTTACCTTTACTCTGTaGGAAAGGGAGAGCAGGCTTTCCAGCAGAGTCACACTTGAGATG +
Preference number: 1 (lower is better)
Translates to: TWGLAGWREDFTFTL*ERESRLSSRVTLEM
Trigger: CATCTCAAGTGTGACTCTGCTGGAAAGCCTGCTCTCCCTTTCCCACAGAGTAAAGGTAAAGTCCTCACGCCAGCCTGCAAGGCCCCATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319104.7
3UTR GCA 90 bp ACGCATAGTTCTGGGGGCTTGGGATATGTCAGTGAAGGAGATTTCTaGCCTCAGGGAGCTAATGTTCTCAAAGACATTAGGGAGGCAGAT +
Preference number: 1 (lower is better)
Translates to: THSSGGLGYVSEGDF*PQGANVLKDIREAD
Trigger: ATCTGCCTCCCTAATGTCTTTGAGAACATTAGCTCCCTGAGGGCAGAAATCTCCTTCACTGACATATCCCAAGCCCCCAGAACTATGCGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000319104.7
3UTR GCA 90 bp ATTGGCTTGATGCTCAAAGACACGAAGATTCACCTTCCTCAGAAATaGATCAGGCTACTCTGTGTTTGCAGCATCGCCCAGGTTCCTAAA +
Preference number: 1 (lower is better)
Translates to: IGLMLKDTKIHLPQK*IRLLCVCSIAQVPK
Trigger: TTTAGGAACCTGGGCGATGCTGCAAACACAGAGTAGCCTGATGCATTTCTGAGGAAGGTGAATCTTCGTGTCTTTGAGCATCAAGCCAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527424.6
ENST00000534961.5
3UTR GCA 90 bp ACGAAGATTCACCTTCCTCAGAAATGCATCAGGCTACTCTGTGTTTaGAGCATCGCCCAGGTTCCTAAAACAATCTTCCCTTTACAAATT +
Preference number: 1 (lower is better)
Translates to: TKIHLPQKCIRLLCV*SIAQVPKTIFPLQI
Trigger: AATTTGTAAAGGGAAGATTGTTTTAGGAACCTGGGCGATGCTGCAAACACAGAGTAGCCTGATGCATTTCTGAGGAAGGTGAATCTTCGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527424.6
ENST00000534961.5
3UTR CCA 90 bp GAGCACTACTGTGGTGGCAGGCATAATGGTACATCTGTGAATATCTaGGTGGACAAAACTAACATTGTCTCTGTTTTCATAGAGCTTGTG +
Preference number: 1 (lower is better)
Translates to: EHYCGGRHNGTSVNI*VDKTNIVSVFIELV
Trigger: CACAAGCTCTATGAAAACAGAGACAATGTTAGTTTTGTCCACCCAGATATTCACAGATGTACCATTATGCCTGCCACCACAGTAGTGCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319104.7
3UTR TCA 90 bp CTTTTGTCAAATGTAAATACCGTTCCCAGTACCTTCCTATTGGCTTaGTGCTCAAAGACACGAAGATTCACCTTCCTCAGAAATGCATCA +
Preference number: 1 (lower is better)
Translates to: LLSNVNTVPSTFLLA*CSKTRRFTFLRNAS
Trigger: TGATGCATTTCTGAGGAAGGTGAATCTTCGTGTCTTTGAGCATCAAGCCAATAGGAAGGTACTGGGAACGGTATTTACATTTGACAAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527424.6
ENST00000534961.5
3UTR-3UTR TCA 90 bp AGGCTGGAGTGCAGTGGCGCAATCCACCTCCTGGGTTTACGCCATTCTTCTGCCATGGTCCTGATCTCCTaGCCTTGTGATCTACCCGCC +
Preference number: 2 (lower is better)
Translates to: RLECSGAIHLLGLRHSSAMVLIS*PCDLPA
Trigger: GGCGGGTAGATCACAAGGTCAGGAGATCAGGACCAT...GGCAGAAGAATGGCGTAAACCCAGGAGGTGGATTGCGCCACTGCACTCCAGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000240159.8
ENST00000527424.6
ENST00000534961.5
3UTR-3UTR GCA 90 bp AGGCTGGAGTGCAGTGGCGCAATCCACCTCCTGGGTTTACGCCATTCTTCTGCCAGGCTACTCTGTGTTTaGAGCATCGCCCAGGTTCCT +
Preference number: 2 (lower is better)
Translates to: RLECSGAIHLLGLRHSSARLLCV*SIAQVP
Trigger: AGGAACCTGGGCGATGCTGCAAACACAGAGTAGCCT...GGCAGAAGAATGGCGTAAACCCAGGAGGTGGATTGCGCCACTGCACTCCAGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527424.6
ENST00000534961.5
3UTR-3UTR GCA 90 bp CATGTAGGGAGCCAGGCACTTGGTGCCTGGGAGACTGCCTGGAAGGTCGCTGTGGTCACTGCCTACTTTTaGACTACTTTTGCACTGCCT +
Preference number: 2 (lower is better)
Translates to: HVGSQALGAWETAWKVAVVTAYF*TTFALP
Trigger: AGGCAGTGCAAAAGTAGTGCAAAAGTAGGCAGTGAC...CACAGCGACCTTCCAGGCAGTCTCCCAGGCACCAAGTGCCTGGCTCCCTACATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319104.7
3UTR-3UTR GCA 90 bp TCTGGGGGCTTGGGATATGTCAGTGAAGGAGATTTCTGCCCTCAGGGAGCTAATCTGAATGCCTCAGAGTaGCCTGGGGTAAGGGGAGGG +
Preference number: 2 (lower is better)
Translates to: SGGLGYVSEGDFCPQGANLNASE*PGVRGG
Trigger: CCCTCCCCTTACCCCAGGGCACTCTGAGGCATTCAG...ATTAGCTCCCTGAGGGCAGAAATCTCCTTCACTGACATATCCCAAGCCCCCAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000319104.7
3UTR-3UTR GCA 90 bp ATGCTAACACTGACTCCTGGGCATCCCCTCACATCCTGCTGTCATACATTCACTTTGCCCAGGCTGGAGTaGAGTGGCGCAATCCACCTC +
Preference number: 2 (lower is better)
Translates to: MLTLTPGHPLTSCCHTFTLPRLE*SGAIHL
Trigger: GAGGTGGATTGCGCCACTGCACTCCAGCCTGGGCAA...AGTGAATGTATGACAGCAGGATGTGAGGGGATGCCCAGGAGTCAGTGTTAGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527424.6
ENST00000534961.5
3UTR-3UTR CCA 90 bp GTACATGGCAGTGTGACAAACTCCTACTCACTCGCTTTTCAAGTTGGTGACTGCCAGGCTGGAGTGCAGTaGCGCAATCCACCTCCTGGG +
Preference number: 2 (lower is better)
Translates to: VHGSVTNSYSLAFQVGDCQAGVQ*RNPPPG
Trigger: CCCAGGAGGTGGATTGCGCCACTGCACTCCAGCCTG...GCAGTCACCAACTTGAAAAGCGAGTGAGTAGGAGTTTGTCACACTGCCATGTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527424.6
ENST00000534961.5
3UTR-3UTR TCA 90 bp GCCCTCAGGGAGCTAATGTTCTCAAAGACATTAGGGAGGCAGATAGCAAACACGGAGTATGTTAGCCGGTaGGAGGTGCTCTGTGGGCTG +
Preference number: 2 (lower is better)
Translates to: ALRELMFSKTLGRQIANTEYVSR*EVLCGL
Trigger: CAGCCCACAGAGCACCTCTCACCGGCTAACATACTC...CGTGTTTGCTATCTGCCTCCCTAATGTCTTTGAGAACATTAGCTCCCTGAGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319104.7
3UTR-3UTR CCA 90 bp TCAGTGAAGGAGATTTCTGCCCTCAGGGAGCTAATGTTCTCAAAGACATTAGGGGGAGGGCTGGATGGCTaGAGCAGAGTGAGCTGTGGG +
Preference number: 2 (lower is better)
Translates to: SVKEISALRELMFSKTLGGGLDG*SRVSCG
Trigger: CCCACAGCTCACTCTGCTCCAGCCATCCAGCCCTCC...CCCTAATGTCTTTGAGAACATTAGCTCCCTGAGGGCAGAAATCTCCTTCACTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000319104.7
3UTR-3UTR CCA 90 bp AGGCTGGAGTGCAGTGGCGCAATCCACCTCCTGGGTTTACGCCATTCTTCTGCCCCAGTACCTTCCTATTaGCTTGATGCTCAAAGACAC +
Preference number: 2 (lower is better)
Translates to: RLECSGAIHLLGLRHSSAPVPSY*LDAQRH
Trigger: GTGTCTTTGAGCATCAAGCCAATAGGAAGGTACTGG...GGCAGAAGAATGGCGTAAACCCAGGAGGTGGATTGCGCCACTGCACTCCAGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527424.6
ENST00000534961.5
3UTR-3UTR GCA 90 bp CCCCACAGAGCTGCCCAAGTTATTATCTGCTCCTGGGGTTGGACCATCTGTTTTTTTACGCCATTCTTCTaGCTCAGCCTCCCGAGTAGC +
Preference number: 2 (lower is better)
Translates to: PHRAAQVIICSWGWTICFFTPFF*LSLPSS
Trigger: GCTACTCGGGAGGCTGAGGCAGAAGAATGGCGTAAA...AAAACAGATGGTCCAACCCCAGGAGCAGATAATAACTTGGGCAGCTCTGTGGGG
52% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000527424.6
ENST00000534961.5
3UTR-3UTR CCA 90 bp GCCCAAGTTATTATCTGCTCCTGGGGTTGGACCATCTGTTTTATGACAGTTATGCAGGCTGGAGTGCAGTaGCGCAATCCACCTCCTGGG +
Preference number: 2 (lower is better)
Translates to: AQVIICSWGWTICFMTVMQAGVQ*RNPPPG
Trigger: CCCAGGAGGTGGATTGCGCCACTGCACTCCAGCCTG...CATAACTGTCATAAAACAGATGGTCCAACCCCAGGAGCAGATAATAACTTGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000527424.6
ENST00000534961.5
3UTR-3UTR CCA 90 bp CATGTAGGGAGCCAGGCACTTGGTGCCTGGGAGACTGCCTGGAAGGTCGCTGTGACATCTGTGAATATCTaGGTGGACAAAACTAACATT +
Preference number: 2 (lower is better)
Translates to: HVGSQALGAWETAWKVAVTSVNI*VDKTNI
Trigger: AATGTTAGTTTTGTCCACCCAGATATTCACAGATGT...CACAGCGACCTTCCAGGCAGTCTCCCAGGCACCAAGTGCCTGGCTCCCTACATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319104.7
3UTR-3UTR GCA 90 bp AGGCTGGAGTGCAGTGGCGCAATCCACCTCCTGGGTTTACGCCATTCTTCTGCCATGAAAAGGCAGAACTaGTCCAAATGCACAAAACTT +
Preference number: 2 (lower is better)
Translates to: RLECSGAIHLLGLRHSSAMKRQN*SKCTKL
Trigger: AAGTTTTGTGCATTTGGAGCAGTTCTGCCTTTTCAT...GGCAGAAGAATGGCGTAAACCCAGGAGGTGGATTGCGCCACTGCACTCCAGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000240159.8
ENST00000527424.6
ENST00000534961.5
3UTR-3UTR GCA 90 bp CCCCACAGAGCTGCCCAAGTTATTATCTGCTCCTGGGGTTGGACCATCTGTTTTACTCCATTGCTTCATTaGTTTATACTGCCATGGGTC +
Preference number: 2 (lower is better)
Translates to: PHRAAQVIICSWGWTICFTPLLH*FILPWV
Trigger: GACCCATGGCAGTATAAAGCAATGAAGCAATGGAGT...AAAACAGATGGTCCAACCCCAGGAGCAGATAATAACTTGGGCAGCTCTGTGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000527424.6
ENST00000534961.5
3UTR-3UTR GCA 90 bp GCCCAAGTTATTATCTGCTCCTGGGGTTGGACCATCTGTTTTATGACAGTTATGAGGCTACTCTGTGTTTaGAGCATCGCCCAGGTTCCT +
Preference number: 2 (lower is better)
Translates to: AQVIICSWGWTICFMTVMRLLCV*SIAQVP
Trigger: AGGAACCTGGGCGATGCTGCAAACACAGAGTAGCCT...CATAACTGTCATAAAACAGATGGTCCAACCCCAGGAGCAGATAATAACTTGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000527424.6
ENST00000534961.5
3UTR CAA 90 bp ATCTCCCAGTACCATGTGGTACTGAGTCTTCTCAGATACATTCACTaGTTTGGCTCAAGACATGAATCTGAGCTGTGTGCTGCCATCCTG +
Preference number: 2 (lower is better)
Translates to: ISQYHVVLSLLRYIH*FGSRHESELCAAIL
Trigger: CAGGATGGCAGCACACAGCTCAGATTCATGTCTTGAGCCAAACAAGTGAATGTATCTGAGAAGACTCAGTACCACATGGTACTGGGAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527424.6
ENST00000534961.5
3UTR-3UTR GCA 90 bp CCCCCGACTGAAAACATTTCCCTGAATGCATGCCTCAGTAAAGTGGGTAGATCCATAATAGATCTGGGTTaGCCTGAGAATCTCCGGTTA +
Preference number: 2 (lower is better)
Translates to: PPTENISLNACLSKVGRSIIDLG*PENLRL
Trigger: TAACCGGAGATTCTCAGGGCAACCCAGATCTATTAT...GGATCTACCCACTTTACTGAGGCATGCATTCAGGGAAATGTTTTCAGTCGGGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000240159.8
ENST00000319073.5
3UTR-3UTR TCA 90 bp GTACATGGCAGTGTGACAAACTCCTACTCACTCGCTTTTCAAGTTGGTGACTGCAGTACCATGTGGTACTaGGTCTTCTCAGATACATTC +
Preference number: 2 (lower is better)
Translates to: VHGSVTNSYSLAFQVGDCSTMWY*VFSDTF
Trigger: GAATGTATCTGAGAAGACTCAGTACCACATGGTACT...GCAGTCACCAACTTGAAAAGCGAGTGAGTAGGAGTTTGTCACACTGCCATGTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527424.6
ENST00000534961.5
3UTR-3UTR GCA 90 bp CCCCACAGAGCTGCCCAAGTTATTATCTGCTCCTGGGGTTGGACCATCTGTTTTTTGGAGCAGAATGCATaGACACAAAATAAAATCCTG +
Preference number: 2 (lower is better)
Translates to: PHRAAQVIICSWGWTICFLEQNA*TQNKIL
Trigger: CAGGATTTTATTTTGTGTGCATGCATTCTGCTCCAA...AAAACAGATGGTCCAACCCCAGGAGCAGATAATAACTTGGGCAGCTCTGTGGGG
46% GC, longest homopolymer 6 nt, total homopolymer stretches 22 nt.
Matches the following 2 transcripts:
ENST00000527424.6
ENST00000534961.5
3UTR-3UTR TCA 90 bp GCCCAAGTTATTATCTGCTCCTGGGGTTGGACCATCTGTTTTATGACAGTTATGACCTTCCTATTGGCTTaGTGCTCAAAGACACGAAGA +
Preference number: 2 (lower is better)
Translates to: AQVIICSWGWTICFMTVMTFLLA*CSKTRR
Trigger: TCTTCGTGTCTTTGAGCATCAAGCCAATAGGAAGGT...CATAACTGTCATAAAACAGATGGTCCAACCCCAGGAGCAGATAATAACTTGGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000527424.6
ENST00000534961.5
3UTR-3UTR TCA 90 bp ATGAAAGGGAAGTTGGTGTCCTGCGTTCCTCACAAAATTATCCAAAGGATAAAACAACGCCAGCTGAAGTaGGTAAGATCTCCCAGTACC +
Preference number: 2 (lower is better)
Translates to: MKGKLVSCVPHKIIQRIKQRQLK*VRSPST
Trigger: GGTACTGGGAGATCTTACTCACTTCAGCTGGCGTTG...TTTTATCCTTTGGATAATTTTGTGAGGAACGCAGGACACCAACTTCCCTTTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000527424.6
ENST00000534961.5
3UTR-3UTR TCA 90 bp GCTTTATACTGCCATGGGTCCTTCTGTTTGATGTTCTACATTAGCTCAGATATCAGATCTGGGTTGCCCTaGGAATCTCCGGTTATAATC +
Preference number: 2 (lower is better)
Translates to: ALYCHGSFCLMFYISSDIRSGLP*ESPVII
Trigger: GATTATAACCGGAGATTCTCAGGGCAACCCAGATCT...GATATCTGAGCTAATGTAGAACATCAAACAGAAGGACCCATGGCAGTATAAAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240159.8
ENST00000319073.5
3UTR-3UTR TCA 90 bp AGTGTAGAATTCGGATTCATGTCATCTCCACAGACCTTTCCTCTTAGGAGTGCCTATTGTTTTTCTCTATaGCAAGCAACAGCTCTGTCC +
Preference number: 2 (lower is better)
Translates to: SVEFGFMSSPQTFPLRSAYCFSL*QATALS
Trigger: GGACAGAGCTGTTGCTTGTCATAGAGAAAAACAATA...GGCACTCCTAAGAGGAAAGGTCTGTGGAGATGACATGAATCCGAATTCTACACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000527424.6
ENST00000534961.5
3UTR-3UTR GCA 90 bp CGTTCCCAGTACCTTCCTATTGGCTTGATGCTCAAAGACACGAAGATTCACCTTTTCATTGCTTTATACTaGCATGGGTCCTTCTGTTTG +
Preference number: 2 (lower is better)
Translates to: RSQYLPIGLMLKDTKIHLFIALY*HGSFCL
Trigger: CAAACAGAAGGACCCATGGCAGTATAAAGCAATGAA...AAGGTGAATCTTCGTGTCTTTGAGCATCAAGCCAATAGGAAGGTACTGGGAACG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527424.6
ENST00000534961.5
3UTR-3UTR GCA 90 bp GCCCAAGTTATTATCTGCTCCTGGGGTTGGACCATCTGTTTTATGACAGTTATGACTCCATTGCTTCATTaGTTTATACTGCCATGGGTC +
Preference number: 2 (lower is better)
Translates to: AQVIICSWGWTICFMTVMTPLLH*FILPWV
Trigger: GACCCATGGCAGTATAAAGCAATGAAGCAATGGAGT...CATAACTGTCATAAAACAGATGGTCCAACCCCAGGAGCAGATAATAACTTGGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000527424.6
ENST00000534961.5
3UTR-3UTR CCA 90 bp AGTGTAGAATTCGGATTCATGTCATCTCCACAGACCTTTCCTCTTAGGAGTGCCTGCTTTATACTGCCATaGGTCCTTCTGTTTGATGTT +
Preference number: 2 (lower is better)
Translates to: SVEFGFMSSPQTFPLRSACFILP*VLLFDV
Trigger: AACATCAAACAGAAGGACCCATGGCAGTATAAAGCA...GGCACTCCTAAGAGGAAAGGTCTGTGGAGATGACATGAATCCGAATTCTACACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527424.6
ENST00000534961.5
3UTR CAA 90 bp TCTTTTGTCAAATGTAAATACCGTTCCCAGTACCTTCCTATTGGCTaGATGCTCAAAGACACGAAGATTCACCTTCCTCAGAAATGCATC +
Preference number: 2 (lower is better)
Translates to: SFVKCKYRSQYLPIG*MLKDTKIHLPQKCI
Trigger: GATGCATTTCTGAGGAAGGTGAATCTTCGTGTCTTTGAGCATCAAGCCAATAGGAAGGTACTGGGAACGGTATTTACATTTGACAAAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527424.6
ENST00000534961.5
3UTR-3UTR CCA 90 bp TGCTTGACAAACTCTTTAATCACAAGGTTTGAACCAAACCACCAGTCTTCTACACCAGTACCTTCCTATTaGCTTGATGCTCAAAGACAC +
Preference number: 2 (lower is better)
Translates to: CLTNSLITRFEPNHQSSTPVPSY*LDAQRH
Trigger: GTGTCTTTGAGCATCAAGCCAATAGGAAGGTACTGG...TGTAGAAGACTGGTGGTTTGGTTCAAACCTTGTGATTAAAGAGTTTGTCAAGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527424.6
ENST00000534961.5
3UTR-3UTR GCA 90 bp TGCTTGACAAACTCTTTAATCACAAGGTTTGAACCAAACCACCAGTCTTCTACACTCTCAGATCCCTTCTaGATTTATCATCAGAGATCG +
Preference number: 2 (lower is better)
Translates to: CLTNSLITRFEPNHQSSTLSDPF*IYHQRS
Trigger: CGATCTCTGATGATAAATGCAGAAGGGATCTGAGAG...TGTAGAAGACTGGTGGTTTGGTTCAAACCTTGTGATTAAAGAGTTTGTCAAGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527424.6
ENST00000534961.5
3UTR-3UTR TCA 90 bp GAGTTTCACAGCTATATATTATCATATAGGTACCTGCTGAGAAGGATAAGATGGCTGAAAACATTTCCCTaGATGCATGCCTCAGTAAAG +
Preference number: 2 (lower is better)
Translates to: EFHSYILSYRYLLRRIRWLKTFP*MHASVK
Trigger: CTTTACTGAGGCATGCATTCAGGGAAATGTTTTCAG...CCATCTTATCCTTCTCAGCAGGTACCTATATGATAATATATAGCTGTGAAACTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240159.8
ENST00000319073.5
3UTR-3UTR CCA 90 bp GAGTTTCACAGCTATATATTATCATATAGGTACCTGCTGAGAAGGATAAGATGGCATCTAGTTAGCCTTTaGGTTATCACTTCTCGATAC +
Preference number: 2 (lower is better)
Translates to: EFHSYILSYRYLLRRIRWHLVSL*VITSRY
Trigger: GTATCGAGAAGTGATAACCCAAAGGCTAACTAGATG...CCATCTTATCCTTCTCAGCAGGTACCTATATGATAATATATAGCTGTGAAACTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240159.8
ENST00000319073.5
3UTR-3UTR TCA 90 bp TATCTAAACATTCTATGCAGGAGTCCTACTAAGAAATTTTGGTGTAATGCCACTTATTGTTTTTCTCTATaGCAAGCAACAGCTCTGTCC +
Preference number: 2 (lower is better)
Translates to: YLNILCRSPTKKFWCNATYCFSL*QATALS
Trigger: GGACAGAGCTGTTGCTTGTCATAGAGAAAAACAATA...AGTGGCATTACACCAAAATTTCTTAGTAGGACTCCTGCATAGAATGTTTAGATA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000527424.6
ENST00000534961.5
3UTR-3UTR GCA 90 bp TGCTTGACAAACTCTTTAATCACAAGGTTTGAACCAAACCACCAGTCTTCTACACTGATTGACTCTACTTaGTTTAAAAACTCTCAGATC +
Preference number: 2 (lower is better)
Translates to: CLTNSLITRFEPNHQSSTLIDST*FKNSQI
Trigger: GATCTGAGAGTTTTTAAAGCAAGTAGAGTCAATCAG...TGTAGAAGACTGGTGGTTTGGTTCAAACCTTGTGATTAAAGAGTTTGTCAAGCA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000527424.6
ENST00000534961.5
3UTR TCA 72 bp GGGAGAGCAGGCTTTCCAGCAGAGTCACACTTGAGATaGTCATCGGGCTGCGTTGCATGTAGGGAGCCAGGC +
Preference number: 3 (lower is better)
Translates to: GRAGFPAESHLR*SSGCVACREPG
Trigger: GCCTGGCTCCCTACATGCAACGCAGCCCGATGATCATCTCAAGTGTGACTCTGCTGGAAAGCCTGCTCTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319104.7
3UTR GCA 72 bp GCATGTAGGGAGCCAGGCACTTGGTGCCTGGGAGACTaGCTGGAAGGTCGCTGTGATCCTTTAGGTGAGAAG +
Preference number: 3 (lower is better)
Translates to: ACREPGTWCLGD*LEGRCDPLGEK
Trigger: CTTCTCACCTAAAGGATCACAGCGACCTTCCAGGCAGTCTCCCAGGCACCAAGTGCCTGGCTCCCTACATGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319104.7
3UTR TCA 72 bp GGAAAGGGAGAGCAGGCTTTCCAGCAGAGTCACACTTaGGATGATCATCGGGCTGCGTTGCATGTAGGGAGC +
Preference number: 3 (lower is better)
Translates to: GKGEQAFQQSHT*DDHRAALHVGS
Trigger: GCTCCCTACATGCAACGCAGCCCGATGATCATCTCAAGTGTGACTCTGCTGGAAAGCCTGCTCTCCCTTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319104.7
3UTR TCA 72 bp AGCAACCAAGGTCACATGGGGCCTTGCAGGCTGGCGTaGGGACTTTACCTTTACTCTGTGGGAAAGGGAGAG +
Preference number: 3 (lower is better)
Translates to: SNQGHMGPCRLA*GLYLYSVGKGE
Trigger: CTCTCCCTTTCCCACAGAGTAAAGGTAAAGTCCTCACGCCAGCCTGCAAGGCCCCATGTGACCTTGGTTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319104.7
3UTR TCA 72 bp GGTTTCACCATGTTAGCCAGGATGGTCCTGATCTCCTaGCCTTGTGATCTACCCGCCTCAGCCTCCCAAAGT +
Preference number: 3 (lower is better)
Translates to: GFTMLARMVLIS*PCDLPASASQS
Trigger: ACTTTGGGAGGCTGAGGCGGGTAGATCACAAGGTCAGGAGATCAGGACCATCCTGGCTAACATGGTGAAACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000240159.8
ENST00000527424.6
ENST00000534961.5
3UTR TCA 72 bp AGTGAGGGTGGCTTAGACCTGGGCGGCAGCCATGACTaGGTAAGAAGTGATCTTTCCTTGTCTTCTGCCCTT +
Preference number: 3 (lower is better)
Translates to: SEGGLDLGGSHD*VRSDLSLSSAL
Trigger: AAGGGCAGAAGACAAGGAAAGATCACTTCTTACTCAGTCATGGCTGCCGCCCAGGTCTAAGCCACCCTCACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319104.7
3UTR TCA 72 bp GATAGCAAACACGTGACCACAGAGTATGTTAGCCGGTaGGAGGTGCTCTGTGGGCTGAGGGAGTTGCAAGTT +
Preference number: 3 (lower is better)
Translates to: DSKHVTTEYVSR*EVLCGLRELQV
Trigger: AACTTGCAACTCCCTCAGCCCACAGAGCACCTCTCACCGGCTAACATACTCTGTGGTCACGTGTTTGCTATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319104.7
3UTR-3UTR CAA 90 bp AGGCTGGAGTGCAGTGGCGCAATCCACCTCCTGGGTTTACGCCATTCTTCTGCCTACTCCATTGCTTCATaGCTTTATACTGCCATGGGT +
Preference number: 3 (lower is better)
Translates to: RLECSGAIHLLGLRHSSAYSIAS*LYTAMG
Trigger: ACCCATGGCAGTATAAAGCAATGAAGCAATGGAGTA...GGCAGAAGAATGGCGTAAACCCAGGAGGTGGATTGCGCCACTGCACTCCAGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000240159.8
ENST00000527424.6
ENST00000534961.5
3UTR-3UTR CAA 90 bp GAGCCAGGCACTTGGTGCCTGGGAGACTGCCTGGAAGGTCGCTGTGATCCTTTAACTTTTGCACTACTTTaGCACTGCCTACTTTTGGGT +
Preference number: 3 (lower is better)
Translates to: EPGTWCLGDCLEGRCDPLTFALL*HCLLLG
Trigger: ACCCAAAAGTAGGCAGTGCAAAAGTAGTGCAAAAGT...TAAAGGATCACAGCGACCTTCCAGGCAGTCTCCCAGGCACCAAGTGCCTGGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319104.7
3UTR-3UTR CAA 90 bp AGTCTGGTACATGGCAGTGTGACAAACTCCTACTCACTCGCTTTTCAAGTTGGTCAGGCTACTCTGTGTTaGCAGCATCGCCCAGGTTCC +
Preference number: 3 (lower is better)
Translates to: SLVHGSVTNSYSLAFQVGQATLC*QHRPGS
Trigger: GGAACCTGGGCGATGCTGCAAACACAGAGTAGCCTG...ACCAACTTGAAAAGCGAGTGAGTAGGAGTTTGTCACACTGCCATGTACCAGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527424.6
ENST00000534961.5
3UTR-3UTR CAA 90 bp CCCCACAGAGCTGCCCAAGTTATTATCTGCTCCTGGGGTTGGACCATCTGTTTTTCTATGAAAGGGAAGTaGGTGTCCTGCGTTCCTCAC +
Preference number: 3 (lower is better)
Translates to: PHRAAQVIICSWGWTICFSMKGK*VSCVPH
Trigger: GTGAGGAACGCAGGACACCAACTTCCCTTTCATAGA...AAAACAGATGGTCCAACCCCAGGAGCAGATAATAACTTGGGCAGCTCTGTGGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000527424.6
ENST00000534961.5
3UTR GCA 72 bp ATGCTAACACTGACTCCTGGGCATCCCCTCACATCCTaGTGTCATACATTCACTAATGAGCAACGCCAGCTG +
Preference number: 3 (lower is better)
Translates to: MLTLTPGHPLTS*CHTFTNEQRQL
Trigger: CAGCTGGCGTTGCTCATTAGTGAATGTATGACAGCAGGATGTGAGGGGATGCCCAGGAGTCAGTGTTAGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527424.6
ENST00000534961.5
3UTR GCA 72 bp TCTGGGGGCTTGGGATATGTCAGTGAAGGAGATTTCTaGCCTCAGGGAGCTAATGTTCTCAAAGACATTAGG +
Preference number: 3 (lower is better)
Translates to: SGGLGYVSEGDF*PQGANVLKDIR
Trigger: CCTAATGTCTTTGAGAACATTAGCTCCCTGAGGGCAGAAATCTCCTTCACTGACATATCCCAAGCCCCCAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000319104.7
3UTR GCA 72 bp CACCTTCCTCAGAAATGCATCAGGCTACTCTGTGTTTaGAGCATCGCCCAGGTTCCTAAAACAATCTTCCCT +
Preference number: 3 (lower is better)
Translates to: HLPQKCIRLLCV*SIAQVPKTIFP
Trigger: AGGGAAGATTGTTTTAGGAACCTGGGCGATGCTGCAAACACAGAGTAGCCTGATGCATTTCTGAGGAAGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527424.6
ENST00000534961.5
3UTR-3UTR CAA 90 bp CCCCACAGAGCTGCCCAAGTTATTATCTGCTCCTGGGGTTGGACCATCTGTTTTGAACCAGTTTCTCTCTaGCTGTTCCTCTTAACAACT +
Preference number: 3 (lower is better)
Translates to: PHRAAQVIICSWGWTICFEPVSL*LFLLTT
Trigger: AGTTGTTAAGAGGAACAGCAAGAGAGAAACTGGTTC...AAAACAGATGGTCCAACCCCAGGAGCAGATAATAACTTGGGCAGCTCTGTGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000527424.6
ENST00000534961.5
3UTR-3UTR CAA 90 bp GCCCAAGTTATTATCTGCTCCTGGGGTTGGACCATCTGTTTTATGACAGTTATGCACTCGCTTTTCAAGTaGGTGACTGCAGCTGAAATG +
Preference number: 3 (lower is better)
Translates to: AQVIICSWGWTICFMTVMHSLFK*VTAAEM
Trigger: CATTTCAGCTGCAGTCACCAACTTGAAAAGCGAGTG...CATAACTGTCATAAAACAGATGGTCCAACCCCAGGAGCAGATAATAACTTGGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000527424.6
ENST00000534961.5
3UTR TCA 72 bp GTAGGAAATGCATTTCCAGTCTGGTACATGGCAGTGTaGCAAACTCCTACTCACTCGCTTTTCAAGTTGGTG +
Preference number: 3 (lower is better)
Translates to: VGNAFPVWYMAV*QTPTHSLFKLV
Trigger: CACCAACTTGAAAAGCGAGTGAGTAGGAGTTTGTCACACTGCCATGTACCAGACTGGAAATGCATTTCCTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527424.6
ENST00000534961.5
3UTR TCA 72 bp TTTGAACCAAACCACCAGTCTTCTACAACAACTCTGTaGGGTAGGTATCTGCATAGCCACAAGGGATCCACA +
Preference number: 3 (lower is better)
Translates to: FEPNHQSSTTTL*GRYLHSHKGST
Trigger: TGTGGATCCCTTGTGGCTATGCAGATACCTACCTCACAGAGTTGTTGTAGAAGACTGGTGGTTTGGTTCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527424.6
ENST00000534961.5
3UTR CCA 72 bp GTTCCCCACAGAGCTGCCCAAGTTATTATCTGCTCCTaGGGTTGGACCATCTGTTTTATGACAGTTATGATA +
Preference number: 3 (lower is better)
Translates to: VPHRAAQVIICS*GWTICFMTVMI
Trigger: TATCATAACTGTCATAAAACAGATGGTCCAACCCCAGGAGCAGATAATAACTTGGGCAGCTCTGTGGGGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000527424.6
ENST00000534961.5
3UTR-3UTR CAA 90 bp TTTATTAGCATTACCATGGATATTGAGACTGCTGGGAATATCTCTGAGGTCCTCGGTCACTGCCTACTTTaGCACTACTTTTGCACTGCC +
Preference number: 3 (lower is better)
Translates to: FISITMDIETAGNISEVLGHCLL*HYFCTA
Trigger: GGCAGTGCAAAAGTAGTGCAAAAGTAGGCAGTGACC...GAGGACCTCAGAGATATTCCCAGCAGTCTCAATATCCATGGTAATGCTAATAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319104.7
3UTR-3UTR CAA 90 bp TATCTAAACATTCTATGCAGGAGTCCTACTAAGAAATTTTGGTGTAATGCCACTCAGGCTACTCTGTGTTaGCAGCATCGCCCAGGTTCC +
Preference number: 3 (lower is better)
Translates to: YLNILCRSPTKKFWCNATQATLC*QHRPGS
Trigger: GGAACCTGGGCGATGCTGCAAACACAGAGTAGCCTG...AGTGGCATTACACCAAAATTTCTTAGTAGGACTCCTGCATAGAATGTTTAGATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527424.6
ENST00000534961.5
3UTR-3UTR CAA 90 bp GTACATGGCAGTGTGACAAACTCCTACTCACTCGCTTTTCAAGTTGGTGACTGCCTCAGATACATTCACTaGTTTGGCTCAAGACATGAA +
Preference number: 3 (lower is better)
Translates to: VHGSVTNSYSLAFQVGDCLRYIH*FGSRHE
Trigger: TTCATGTCTTGAGCCAAACAAGTGAATGTATCTGAG...GCAGTCACCAACTTGAAAAGCGAGTGAGTAGGAGTTTGTCACACTGCCATGTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527424.6
ENST00000534961.5
3UTR TCA 72 bp AGCACTACTGTGGTGGCAGGCATAATGGTACATCTGTaGATATCTGGGTGGACAAAACTAACATTGTCTCTG +
Preference number: 3 (lower is better)
Translates to: STTVVAGIMVHL*ISGWTKLTLSL
Trigger: CAGAGACAATGTTAGTTTTGTCCACCCAGATATTCACAGATGTACCATTATGCCTGCCACCACAGTAGTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319104.7
3UTR-3UTR CAA 90 bp TGCTTGACAAACTCTTTAATCACAAGGTTTGAACCAAACCACCAGTCTTCTACATCTATGAAAGGGAAGTaGGTGTCCTGCGTTCCTCAC +
Preference number: 3 (lower is better)
Translates to: CLTNSLITRFEPNHQSSTSMKGK*VSCVPH
Trigger: GTGAGGAACGCAGGACACCAACTTCCCTTTCATAGA...TGTAGAAGACTGGTGGTTTGGTTCAAACCTTGTGATTAAAGAGTTTGTCAAGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527424.6
ENST00000534961.5
3UTR TCA 72 bp AATGTAAATACCGTTCCCAGTACCTTCCTATTGGCTTaGTGCTCAAAGACACGAAGATTCACCTTCCTCAGA +
Preference number: 3 (lower is better)
Translates to: NVNTVPSTFLLA*CSKTRRFTFLR
Trigger: TCTGAGGAAGGTGAATCTTCGTGTCTTTGAGCATCAAGCCAATAGGAAGGTACTGGGAACGGTATTTACATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527424.6
ENST00000534961.5
3UTR TCA 72 bp TGTGACAAACTCCTACTCACTCGCTTTTCAAGTTGGTaGCTGCAGCTGAAATGTTTTTCTGTGATGTATGCC +
Preference number: 3 (lower is better)
Translates to: CDKLLLTRFSSW*LQLKCFSVMYA
Trigger: GGCATACATCACAGAAAAACATTTCAGCTGCAGTCACCAACTTGAAAAGCGAGTGAGTAGGAGTTTGTCACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000527424.6
ENST00000534961.5
3UTR CCA 72 bp CACAGAGCTGCCCAAGTTATTATCTGCTCCTGGGGTTaGACCATCTGTTTTATGACAGTTATGATATTGTTG +
Preference number: 3 (lower is better)
Translates to: HRAAQVIICSWG*TICFMTVMILL
Trigger: CAACAATATCATAACTGTCATAAAACAGATGGTCCAACCCCAGGAGCAGATAATAACTTGGGCAGCTCTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000527424.6
ENST00000534961.5
3UTR-3UTR CAA 90 bp TGCTTGACAAACTCTTTAATCACAAGGTTTGAACCAAACCACCAGTCTTCTACATACTCCATTGCTTCATaGCTTTATACTGCCATGGGT +
Preference number: 3 (lower is better)
Translates to: CLTNSLITRFEPNHQSSTYSIAS*LYTAMG
Trigger: ACCCATGGCAGTATAAAGCAATGAAGCAATGGAGTA...TGTAGAAGACTGGTGGTTTGGTTCAAACCTTGTGATTAAAGAGTTTGTCAAGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527424.6
ENST00000534961.5
3UTR TCA 72 bp AAAACACTTTCATCAATAGCATGGGGATTGTATCTATaGAAGGGAAGTTGGTGTCCTGCGTTCCTCACAAAA +
Preference number: 3 (lower is better)
Translates to: KTLSSIAWGLYL*KGSWCPAFLTK
Trigger: TTTTGTGAGGAACGCAGGACACCAACTTCCCTTTCATAGATACAATCCCCATGCTATTGATGAAAGTGTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000527424.6
ENST00000534961.5
3UTR CCA 72 bp TGTGGTGGCAGGCATAATGGTACATCTGTGAATATCTaGGTGGACAAAACTAACATTGTCTCTGTTTTCATA +
Preference number: 3 (lower is better)
Translates to: CGGRHNGTSVNI*VDKTNIVSVFI
Trigger: TATGAAAACAGAGACAATGTTAGTTTTGTCCACCCAGATATTCACAGATGTACCATTATGCCTGCCACCACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319104.7
3UTR-3UTR CAA 90 bp ATGAAAGGGAAGTTGGTGTCCTGCGTTCCTCACAAAATTATCCAAAGGATAAAAGATACATTCACTTGTTaGGCTCAAGACATGAATCTG +
Preference number: 3 (lower is better)
Translates to: MKGKLVSCVPHKIIQRIKDTFTC*AQDMNL
Trigger: CAGATTCATGTCTTGAGCCAAACAAGTGAATGTATC...TTTTATCCTTTGGATAATTTTGTGAGGAACGCAGGACACCAACTTCCCTTTCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000527424.6
ENST00000534961.5
3UTR GCA 72 bp TGTGAGATAATACTCCATTGCTTCATTGCTTTATACTaGCATGGGTCCTTCTGTTTGATGTTCTACATTAGC +
Preference number: 3 (lower is better)
Translates to: CEIILHCFIALY*HGSFCLMFYIS
Trigger: GCTAATGTAGAACATCAAACAGAAGGACCCATGGCAGTATAAAGCAATGAAGCAATGGAGTATTATCTCACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000240159.8
ENST00000319073.5
ENST00000526349.5
ENST00000527424.6
ENST00000534961.5
3UTR CCA 72 bp TTCTGTGATGTATGCCACCCTTTTACCTATTTGATTTaGAAGTGTAGAATTCGGATTCATGTCATCTCCACA +
Preference number: 3 (lower is better)
Translates to: FCDVCHPFTYLI*KCRIRIHVIST
Trigger: TGTGGAGATGACATGAATCCGAATTCTACACTTCCAAATCAAATAGGTAAAAGGGTGGCATACATCACAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527424.6
ENST00000534961.5
3UTR TCA 72 bp ATCCATAATTCTCTCCATAATAGATCTGGGTTGCCCTaGGAATCTCCGGTTATAATCATTAATATCCTGATG +
Preference number: 3 (lower is better)
Translates to: IHNSLHNRSGLP*ESPVIIINILM
Trigger: CATCAGGATATTAATGATTATAACCGGAGATTCTCAGGGCAACCCAGATCTATTATGGAGAGAATTATGGAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240159.8
ENST00000319073.5
3UTR-3UTR CAA 90 bp TATCTAAACATTCTATGCAGGAGTCCTACTAAGAAATTTTGGTGTAATGCCACTCGAAAGGATGAGCTCTaGTTTAAATGTCTAACTGTG +
Preference number: 3 (lower is better)
Translates to: YLNILCRSPTKKFWCNATRKDEL*FKCLTV
Trigger: CACAGTTAGACATTTAAACAAGAGCTCATCCTTTCG...AGTGGCATTACACCAAAATTTCTTAGTAGGACTCCTGCATAGAATGTTTAGATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527424.6
ENST00000534961.5
3UTR TCA 72 bp AATAAAATGCTTGACAAACTCTTTAATCACAAGGTTTaGACCAAACCACCAGTCTTCTACAACAACTCTGTG +
Preference number: 3 (lower is better)
Translates to: NKMLDKLFNHKV*TKPPVFYNNSV
Trigger: CACAGAGTTGTTGTAGAAGACTGGTGGTTTGGTTCAAACCTTGTGATTAAAGAGTTTGTCAAGCATTTTATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527424.6
ENST00000534961.5
CDS-3UTR GCA 90 bp GTTGCATGTAGGGAGCCAGGCACTTGGTGCCTGGGAGACTGCCTGGAAGGTCGCCTGAATGCCTCAGAGTaGCCTGGGGTAAGGGGAGGG +
Preference number: 4 (lower is better)
Translates to: VACREPGTWCLGDCLEGRLNASE*PGVRGG
Trigger: CCCTCCCCTTACCCCAGGGCACTCTGAGGCATTCAG...GCGACCTTCCAGGCAGTCTCCCAGGCACCAAGTGCCTGGCTCCCTACATGCAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319104.7
CDS-3UTR CCA 90 bp CATGTAGGGAGCCAGGCACTTGGTGCCTGGGAGACTGCCTGGAAGGTCGCTGTGGTGAGAGGTGCTCTGTaGGCTGAGGGAGTTGCAAGT +
Preference number: 4 (lower is better)
Translates to: HVGSQALGAWETAWKVAVVRGAL*AEGVAS
Trigger: ACTTGCAACTCCCTCAGCCCACAGAGCACCTCTCAC...CACAGCGACCTTCCAGGCAGTCTCCCAGGCACCAAGTGCCTGGCTCCCTACATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319104.7
CDS-3UTR TCA 90 bp GAGCCAGGCACTTGGTGCCTGGGAGACTGCCTGGAAGGTCGCTGTGATCCTTTAGAGTATGTTAGCCGGTaGGAGGTGCTCTGTGGGCTG +
Preference number: 4 (lower is better)
Translates to: EPGTWCLGDCLEGRCDPLEYVSR*EVLCGL
Trigger: CAGCCCACAGAGCACCTCTCACCGGCTAACATACTC...TAAAGGATCACAGCGACCTTCCAGGCAGTCTCCCAGGCACCAAGTGCCTGGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319104.7
CDS-3UTR GCA 90 bp GTACATGGCAGTGTGACAAACTCCTACTCACTCGCTTTTCAAGTTGGTGACTGCCCAGGGCGGAGCGCGTaGTCGCCTCGACACGCAGCG +
Preference number: 4 (lower is better)
Translates to: VHGSVTNSYSLAFQVGDCPGRSA*SPRHAA
Trigger: CGCTGCGTGTCGAGGCGAGCACGCGCTCCGCCCTGG...GCAGTCACCAACTTGAAAAGCGAGTGAGTAGGAGTTTGTCACACTGCCATGTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534961.5
CDS-3UTR CCA 90 bp AGGCTGGAGTGCAGTGGCGCAATCCACCTCCTGGGTTTACGCCATTCTTCTGCCGTCCCCTTTCTAATTTaGAGTGCGGGTGCGGGCGCA +
Preference number: 4 (lower is better)
Translates to: RLECSGAIHLLGLRHSSAVPFLI*SAGAGA
Trigger: TGCGCCCGCACCCGCACTCCAAATTAGAAAGGGGAC...GGCAGAAGAATGGCGTAAACCCAGGAGGTGGATTGCGCCACTGCACTCCAGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240159.8
ENST00000534961.5
CDS-3UTR GCA 90 bp GAGCAACCAAGGTCACATGGGGCCTTGCAGGCTGGCGTGAGGACTTTACCTTTAGCTGAGGCCCTGACCTaGATCCGACTGTACAGGCAG +
Preference number: 4 (lower is better)
Translates to: EQPRSHGALQAGVRTLPLAEALT*IRLYRQ
Trigger: CTGCCTGTACAGTCGGATGCAGGTCAGGGCCTCAGC...TAAAGGTAAAGTCCTCACGCCAGCCTGCAAGGCCCCATGTGACCTTGGTTGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319104.7
CDS-3UTR TCA 90 bp AGGCTGGAGTGCAGTGGCGCAATCCACCTCCTGGGTTTACGCCATTCTTCTGCCGATTGCCCCAAGCCATaGACCATATCGCCAGTAAGC +
Preference number: 4 (lower is better)
Translates to: RLECSGAIHLLGLRHSSADCPKP*TISPVS
Trigger: GCTTACTGGCGATATGGTTCATGGCTTGGGGCAATC...GGCAGAAGAATGGCGTAAACCCAGGAGGTGGATTGCGCCACTGCACTCCAGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527424.6
ENST00000534961.5
CDS-3UTR GCA 90 bp GAGCAACCAAGGTCACATGGGGCCTTGCAGGCTGGCGTGAGGACTTTACCTTTAGGGAAGGAGGCTTGGTaGAGGCAGATGGGACAGTAC +
Preference number: 4 (lower is better)
Translates to: EQPRSHGALQAGVRTLPLGKEAW*RQMGQY
Trigger: GTACTGTCCCATCTGCCTGCACCAAGCCTCCTTCCC...TAAAGGTAAAGTCCTCACGCCAGCCTGCAAGGCCCCATGTGACCTTGGTTGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319104.7
CDS-3UTR CCA 90 bp AGGCTGGAGTGCAGTGGCGCAATCCACCTCCTGGGTTTACGCCATTCTTCTGCCAGAACTGCTGTCGAGTaGCAGCAGGTGCATCCTGTT +
Preference number: 4 (lower is better)
Translates to: RLECSGAIHLLGLRHSSARTAVE*QQVHPV
Trigger: AACAGGATGCACCTGCTGCCACTCGACAGCAGTTCT...GGCAGAAGAATGGCGTAAACCCAGGAGGTGGATTGCGCCACTGCACTCCAGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000240159.8
ENST00000527424.6
ENST00000534961.5
CDS-3UTR CCA 90 bp CATGTAGGGAGCCAGGCACTTGGTGCCTGGGAGACTGCCTGGAAGGTCGCTGTGATAGTTCTGGGGGCTTaGGATATGTCAGTGAAGGAG +
Preference number: 4 (lower is better)
Translates to: HVGSQALGAWETAWKVAVIVLGA*DMSVKE
Trigger: CTCCTTCACTGACATATCCCAAGCCCCCAGAACTAT...CACAGCGACCTTCCAGGCAGTCTCCCAGGCACCAAGTGCCTGGCTCCCTACATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000319104.7
CDS-3UTR TCA 90 bp TGTAGGGAGCCAGGCACTTGGTGCCTGGGAGACTGCCTGGAAGGTCGCTGTGATGCATCCTGTTCTGTTTaGAGCTGTTCTCGAAGTACC +
Preference number: 4 (lower is better)
Translates to: CREPGTWCLGDCLEGRCDASCSV*SCSRST
Trigger: GGTACTTCGAGAACAGCTTCAAACAGAACAGGATGC...ATCACAGCGACCTTCCAGGCAGTCTCCCAGGCACCAAGTGCCTGGCTCCCTACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319104.7
CDS-3UTR TCA 90 bp TGTAGGGAGCCAGGCACTTGGTGCCTGGGAGACTGCCTGGAAGGTCGCTGTGATCTGTGGGGACAAATGTaGGATGAGGTTAGAGAGGAA +
Preference number: 4 (lower is better)
Translates to: CREPGTWCLGDCLEGRCDLWGQM*DEVREE
Trigger: TTCCTCTCTAACCTCATCTCACATTTGTCCCCACAG...ATCACAGCGACCTTCCAGGCAGTCTCCCAGGCACCAAGTGCCTGGCTCCCTACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319104.7
CDS-3UTR TCA 90 bp TCAGTGAAGGAGATTTCTGCCCTCAGGGAGCTAATGTTCTCAAAGACATTAGGGCCAGGGCAGAGCTCCTaGGGCTGGGCGTCTTCAGCC +
Preference number: 4 (lower is better)
Translates to: SVKEISALRELMFSKTLGPGQSS*GWASSA
Trigger: GGCTGAAGACGCCCAGCCTCAGGAGCTCTGCCCTGG...CCCTAATGTCTTTGAGAACATTAGCTCCCTGAGGGCAGAAATCTCCTTCACTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319104.7
CDS-3UTR CCA 90 bp AGGCTGGAGTGCAGTGGCGCAATCCACCTCCTGGGTTTACGCCATTCTTCTGCCCTTGGTGCAGGCAGATaGGACAGTACATGTCAGTGT +
Preference number: 4 (lower is better)
Translates to: RLECSGAIHLLGLRHSSALGAGR*DSTCQC
Trigger: ACACTGACATGTACTGTCCCATCTGCCTGCACCAAG...GGCAGAAGAATGGCGTAAACCCAGGAGGTGGATTGCGCCACTGCACTCCAGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000240159.8
ENST00000527424.6
ENST00000534961.5
CDS-3UTR CCA 90 bp CCCCCGACTGAAAACATTTCCCTGAATGCATGCCTCAGTAAAGTGGGTAGATCCCAGGCTGGAGTGCAGTaGCGCAATCCACCTCCTGGG +
Preference number: 4 (lower is better)
Translates to: PPTENISLNACLSKVGRSQAGVQ*RNPPPG
Trigger: CCCAGGAGGTGGATTGCGCCACTGCACTCCAGCCTG...GGATCTACCCACTTTACTGAGGCATGCATTCAGGGAAATGTTTTCAGTCGGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000240159.8
CDS-3UTR TCA 90 bp TGTAGGGAGCCAGGCACTTGGTGCCTGGGAGACTGCCTGGAAGGTCGCTGTGATCAATCAAAGCGAAACTaGCCACAACTGCCACAAGTA +
Preference number: 4 (lower is better)
Translates to: CREPGTWCLGDCLEGRCDQSKRN*PQLPQV
Trigger: TACTTGTGGCAGTTGTGGTCAGTTTCGCTTTGATTG...ATCACAGCGACCTTCCAGGCAGTCTCCCAGGCACCAAGTGCCTGGCTCCCTACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319104.7
CDS-3UTR TCA 90 bp GAGCCAGGCACTTGGTGCCTGGGAGACTGCCTGGAAGGTCGCTGTGATCCTTTATACAGATTGGACAACTaGTTGCCCCAAGCCATGAAC +
Preference number: 4 (lower is better)
Translates to: EPGTWCLGDCLEGRCDPLYRLDN*LPQAMN
Trigger: GTTCATGGCTTGGGGCAATCAGTTGTCCAATCTGTA...TAAAGGATCACAGCGACCTTCCAGGCAGTCTCCCAGGCACCAAGTGCCTGGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319104.7
CDS-3UTR TCA 90 bp GAGCCAGGCACTTGGTGCCTGGGAGACTGCCTGGAAGGTCGCTGTGATCCTTTACACAGTCTAGTAACGTaGAGCATAAACGTGGTGAGG +
Preference number: 4 (lower is better)
Translates to: EPGTWCLGDCLEGRCDPLHSLVT*SINVVR
Trigger: CCTCACCACGTTTATGCTTCACGTTACTAGACTGTG...TAAAGGATCACAGCGACCTTCCAGGCAGTCTCCCAGGCACCAAGTGCCTGGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319104.7
CDS-3UTR TCA 90 bp AGGCTGGAGTGCAGTGGCGCAATCCACCTCCTGGGTTTACGCCATTCTTCTGCCTGGGGATTGTATCTATaGAAGGGAAGTTGGTGTCCT +
Preference number: 4 (lower is better)
Translates to: RLECSGAIHLLGLRHSSAWGLYL*KGSWCP
Trigger: AGGACACCAACTTCCCTTTCATAGATACAATCCCCA...GGCAGAAGAATGGCGTAAACCCAGGAGGTGGATTGCGCCACTGCACTCCAGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527424.6
ENST00000534961.5
CDS-3UTR CCA 90 bp AGTCTGGTACATGGCAGTGTGACAAACTCCTACTCACTCGCTTTTCAAGTTGGTCAGGCTGGAGTGCAGTaGCGCAATCCACCTCCTGGG +
Preference number: 4 (lower is better)
Translates to: SLVHGSVTNSYSLAFQVGQAGVQ*RNPPPG
Trigger: CCCAGGAGGTGGATTGCGCCACTGCACTCCAGCCTG...ACCAACTTGAAAAGCGAGTGAGTAGGAGTTTGTCACACTGCCATGTACCAGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527424.6
ENST00000534961.5
CDS-3UTR CCA 90 bp GCCCTCAGGGAGCTAATGTTCTCAAAGACATTAGGGAGGCAGATAGCAAACACGGCCTGGGAGACTGCCTaGAAGGTCGCTGTGATCCTT +
Preference number: 4 (lower is better)
Translates to: ALRELMFSKTLGRQIANTAWETA*KVAVIL
Trigger: AAGGATCACAGCGACCTTCCAGGCAGTCTCCCAGGC...CGTGTTTGCTATCTGCCTCCCTAATGTCTTTGAGAACATTAGCTCCCTGAGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319104.7
CDS-3UTR TCA 90 bp AGGCTGGAGTGCAGTGGCGCAATCCACCTCCTGGGTTTACGCCATTCTTCTGCCCTGAAAACATTTCCCTaGATGCATGCCTCAGTAAAG +
Preference number: 4 (lower is better)
Translates to: RLECSGAIHLLGLRHSSALKTFP*MHASVK
Trigger: CTTTACTGAGGCATGCATTCAGGGAAATGTTTTCAG...GGCAGAAGAATGGCGTAAACCCAGGAGGTGGATTGCGCCACTGCACTCCAGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000240159.8
ENST00000527424.6
ENST00000534961.5
CDS-3UTR TCA 90 bp CCCCCGACTGAAAACATTTCCCTGAATGCATGCCTCAGTAAAGTGGGTAGATCCATGGTCCTGATCTCCTaGCCTTGTGATCTACCCGCC +
Preference number: 4 (lower is better)
Translates to: PPTENISLNACLSKVGRSMVLIS*PCDLPA
Trigger: GGCGGGTAGATCACAAGGTCAGGAGATCAGGACCAT...GGATCTACCCACTTTACTGAGGCATGCATTCAGGGAAATGTTTTCAGTCGGGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000240159.8
CDS-3UTR GCA 90 bp GAGCAACCAAGGTCACATGGGGCCTTGCAGGCTGGCGTGAGGACTTTACCTTTAGAAACTGACCACAACTaGCACAAGTACTTGGTCGCT +
Preference number: 4 (lower is better)
Translates to: EQPRSHGALQAGVRTLPLETDHN*HKYLVA
Trigger: AGCGACCAAGTACTTGTGGCAGTTGTGGTCAGTTTC...TAAAGGTAAAGTCCTCACGCCAGCCTGCAAGGCCCCATGTGACCTTGGTTGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319104.7
CDS-3UTR GCA 90 bp AGGCTGGAGTGCAGTGGCGCAATCCACCTCCTGGGTTTACGCCATTCTTCTGCCCTCTCAGATCCCTTCTaGATTTATCATCAGAGATCG +
Preference number: 4 (lower is better)
Translates to: RLECSGAIHLLGLRHSSALSDPF*IYHQRS
Trigger: CGATCTCTGATGATAAATGCAGAAGGGATCTGAGAG...GGCAGAAGAATGGCGTAAACCCAGGAGGTGGATTGCGCCACTGCACTCCAGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527424.6
ENST00000534961.5
CDS-3UTR CCA 90 bp TACTGCCATGGGTCCTTCTGTTTGATGTTCTACATTAGCTCAGATATCCTAGTAGCCGCGGGGCGATTCTaGGGCTTCCAGACGAGGGAG +
Preference number: 4 (lower is better)
Translates to: YCHGSFCLMFYISSDILVAAGRF*GFQTRE
Trigger: CTCCCTCGTCTGGAAGCCCCAGAATCGCCCCGCGGC...TACTAGGATATCTGAGCTAATGTAGAACATCAAACAGAAGGACCCATGGCAGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240159.8
ENST00000534961.5
CDS-3UTR CCA 90 bp AGGCTGGAGTGCAGTGGCGCAATCCACCTCCTGGGTTTACGCCATTCTTCTGCCGTTATTATCTGCTCCTaGGGTTGGACCATCTGTTTT +
Preference number: 4 (lower is better)
Translates to: RLECSGAIHLLGLRHSSAVIICS*GWTICF
Trigger: AAAACAGATGGTCCAACCCCAGGAGCAGATAATAAC...GGCAGAAGAATGGCGTAAACCCAGGAGGTGGATTGCGCCACTGCACTCCAGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527424.6
ENST00000534961.5
CDS-3UTR TCA 90 bp GAGCCAGGCACTTGGTGCCTGGGAGACTGCCTGGAAGGTCGCTGTGATCCTTTATCAACAAATAGTTACTaGCTATGCTGCACGCATAGT +
Preference number: 4 (lower is better)
Translates to: EPGTWCLGDCLEGRCDPLSTNSY*LCCTHS
Trigger: ACTATGCGTGCAGCATAGTCAGTAACTATTTGTTGA...TAAAGGATCACAGCGACCTTCCAGGCAGTCTCCCAGGCACCAAGTGCCTGGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319104.7
CDS-3UTR GCA 90 bp TACTGCCATGGGTCCTTCTGTTTGATGTTCTACATTAGCTCAGATATCCTAGTAAATTTGGAGTGCGGGTaGGGGCGCACGCGCACTGCC +
Preference number: 4 (lower is better)
Translates to: YCHGSFCLMFYISSDILVNLECG*GRTRTA
Trigger: GGCAGTGCGCGTGCGCCCGCACCCGCACTCCAAATT...TACTAGGATATCTGAGCTAATGTAGAACATCAAACAGAAGGACCCATGGCAGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000240159.8
ENST00000526349.5
ENST00000534961.5
CDS-3UTR GCA 90 bp AGGCCCCCGACTGAAAACATTTCCCTGAATGCATGCCTCAGTAAAGTGGGTAGATTTACGCCATTCTTCTaGCTCAGCCTCCCGAGTAGC +
Preference number: 4 (lower is better)
Translates to: RPPTENISLNACLSKVGRFTPFF*LSLPSS
Trigger: GCTACTCGGGAGGCTGAGGCAGAAGAATGGCGTAAA...TCTACCCACTTTACTGAGGCATGCATTCAGGGAAATGTTTTCAGTCGGGGGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000240159.8
CDS-3UTR CCA 90 bp CCCCCGACTGAAAACATTTCCCTGAATGCATGCCTCAGTAAAGTGGGTAGATCCAAAGATGTCCACAGTTaGTCTCCACCGGGAAGGAGG +
Preference number: 4 (lower is better)
Translates to: PPTENISLNACLSKVGRSKDVHS*SPPGRR
Trigger: CCTCCTTCCCGGTGGAGACCAACTGTGGACATCTTT...GGATCTACCCACTTTACTGAGGCATGCATTCAGGGAAATGTTTTCAGTCGGGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000240159.8
ENST00000319073.5
CDS-3UTR CCA 90 bp AGGCCCCCGACTGAAAACATTTCCCTGAATGCATGCCTCAGTAAAGTGGGTAGAAAAGATGTCCACAGTTaGTCTCCACCGGGAAGGAGG +
Preference number: 4 (lower is better)
Translates to: RPPTENISLNACLSKVGRKDVHS*SPPGRR
Trigger: CCTCCTTCCCGGTGGAGACCAACTGTGGACATCTTT...TCTACCCACTTTACTGAGGCATGCATTCAGGGAAATGTTTTCAGTCGGGGGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000240159.8
ENST00000319073.5
CDS-3UTR CCA 90 bp AGGCTGGAGTGCAGTGGCGCAATCCACCTCCTGGGTTTACGCCATTCTTCTGCCCATCTAGTTAGCCTTTaGGTTATCACTTCTCGATAC +
Preference number: 4 (lower is better)
Translates to: RLECSGAIHLLGLRHSSAHLVSL*VITSRY
Trigger: GTATCGAGAAGTGATAACCCAAAGGCTAACTAGATG...GGCAGAAGAATGGCGTAAACCCAGGAGGTGGATTGCGCCACTGCACTCCAGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000240159.8
ENST00000527424.6
ENST00000534961.5
CDS-3UTR CCA 90 bp AGGCTGGAGTGCAGTGGCGCAATCCACCTCCTGGGTTTACGCCATTCTTCTGCCTGCTTTATACTGCCATaGGTCCTTCTGTTTGATGTT +
Preference number: 4 (lower is better)
Translates to: RLECSGAIHLLGLRHSSACFILP*VLLFDV
Trigger: AACATCAAACAGAAGGACCCATGGCAGTATAAAGCA...GGCAGAAGAATGGCGTAAACCCAGGAGGTGGATTGCGCCACTGCACTCCAGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000240159.8
ENST00000527424.6
ENST00000534961.5
CDS-3UTR CCA 90 bp TGTAGGGAGCCAGGCACTTGGTGCCTGGGAGACTGCCTGGAAGGTCGCTGTGATTTATTAGCATTACCATaGATATTGAGACTGCTGGGA +
Preference number: 4 (lower is better)
Translates to: CREPGTWCLGDCLEGRCDLLALP*ILRLLG
Trigger: TCCCAGCAGTCTCAATATCCATGGTAATGCTAATAA...ATCACAGCGACCTTCCAGGCAGTCTCCCAGGCACCAAGTGCCTGGCTCCCTACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319104.7
CDS-3UTR TCA 90 bp AAATGTCAATATGATGATGCTGTGCTGAGATGTCTGAATGCCTCAGAGTGCCCTTCATGGGGTATATGCTaGGGCCCTGACCTGCATCCG +
Preference number: 4 (lower is better)
Translates to: KCQYDDAVLRCLNASECPSWGIC*GPDLHP
Trigger: CGGATGCAGGTCAGGGCCTCAGCATATACCCCATGA...AGGGCACTCTGAGGCATTCAGACATCTCAGCACAGCATCATCATATTGACATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319104.7
CDS-3UTR TCA 90 bp TCTGGGGGCTTGGGATATGTCAGTGAAGGAGATTTCTGCCCTCAGGGAGCTAATAGGTTAGAGAGGAAATaGGCAACCAAGGTCACATGG +
Preference number: 4 (lower is better)
Translates to: SGGLGYVSEGDFCPQGANRLERK*ATKVTW
Trigger: CCATGTGACCTTGGTTGCTCATTTCCTCTCTAACCT...ATTAGCTCCCTGAGGGCAGAAATCTCCTTCACTGACATATCCCAAGCCCCCAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000319104.7
CDS-3UTR GCA 90 bp TTCATTGCTTTATACTGCCATGGGTCCTTCTGTTTGATGTTCTACATTAGCTCAAATTTGGAGTGCGGGTaGGGGCGCACGCGCACTGCC +
Preference number: 4 (lower is better)
Translates to: FIALYCHGSFCLMFYISSNLECG*GRTRTA
Trigger: GGCAGTGCGCGTGCGCCCGCACCCGCACTCCAAATT...TGAGCTAATGTAGAACATCAAACAGAAGGACCCATGGCAGTATAAAGCAATGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000240159.8
ENST00000526349.5
ENST00000534961.5
CDS-3UTR CCA 90 bp GTACATGGCAGTGTGACAAACTCCTACTCACTCGCTTTTCAAGTTGGTGACTGCAGAACTGCTGTCGAGTaGCAGCAGGTGCATCCTGTT +
Preference number: 4 (lower is better)
Translates to: VHGSVTNSYSLAFQVGDCRTAVE*QQVHPV
Trigger: AACAGGATGCACCTGCTGCCACTCGACAGCAGTTCT...GCAGTCACCAACTTGAAAAGCGAGTGAGTAGGAGTTTGTCACACTGCCATGTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527424.6
ENST00000534961.5
CDS-3UTR TCA 90 bp CCCCCGACTGAAAACATTTCCCTGAATGCATGCCTCAGTAAAGTGGGTAGATCCAGATCTGGGTTGCCCTaGGAATCTCCGGTTATAATC +
Preference number: 4 (lower is better)
Translates to: PPTENISLNACLSKVGRSRSGLP*ESPVII
Trigger: GATTATAACCGGAGATTCTCAGGGCAACCCAGATCT...GGATCTACCCACTTTACTGAGGCATGCATTCAGGGAAATGTTTTCAGTCGGGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000240159.8
ENST00000319073.5
CDS-3UTR TCA 90 bp AGTGTAGAATTCGGATTCATGTCATCTCCACAGACCTTTCCTCTTAGGAGTGCCCAACGCCAGCTGAAGTaGGTAAGATCTCCCAGTACC +
Preference number: 4 (lower is better)
Translates to: SVEFGFMSSPQTFPLRSAQRQLK*VRSPST
Trigger: GGTACTGGGAGATCTTACTCACTTCAGCTGGCGTTG...GGCACTCCTAAGAGGAAAGGTCTGTGGAGATGACATGAATCCGAATTCTACACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527424.6
ENST00000534961.5
CDS-3UTR GCA 90 bp AGGCCCCCGACTGAAAACATTTCCCTGAATGCATGCCTCAGTAAAGTGGGTAGAGAAACTGACCACAACTaGCACAAGTACTTGGTCGCT +
Preference number: 4 (lower is better)
Translates to: RPPTENISLNACLSKVGRETDHN*HKYLVA
Trigger: AGCGACCAAGTACTTGTGGCAGTTGTGGTCAGTTTC...TCTACCCACTTTACTGAGGCATGCATTCAGGGAAATGTTTTCAGTCGGGGGCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000240159.8
ENST00000319073.5
CDS-3UTR GCA 90 bp ATGCTAACACTGACTCCTGGGCATCCCCTCACATCCTGCTGTCATACATTCACTGAAACTGACCACAACTaGCACAAGTACTTGGTCGCT +
Preference number: 4 (lower is better)
Translates to: MLTLTPGHPLTSCCHTFTETDHN*HKYLVA
Trigger: AGCGACCAAGTACTTGTGGCAGTTGTGGTCAGTTTC...AGTGAATGTATGACAGCAGGATGTGAGGGGATGCCCAGGAGTCAGTGTTAGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527424.6
ENST00000534961.5
CDS-3UTR GCA 90 bp GCTTTATACTGCCATGGGTCCTTCTGTTTGATGTTCTACATTAGCTCAGATATCTTGCCCAGGCTGGAGTaGAGTGGCGCAATCCACCTC +
Preference number: 4 (lower is better)
Translates to: ALYCHGSFCLMFYISSDILPRLE*SGAIHL
Trigger: GAGGTGGATTGCGCCACTGCACTCCAGCCTGGGCAA...GATATCTGAGCTAATGTAGAACATCAAACAGAAGGACCCATGGCAGTATAAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000240159.8
ENST00000527424.6
ENST00000534961.5
CDS-3UTR GCA 90 bp ACTCTGTGGGAAAGGGAGAGCAGGCTTTCCAGCAGAGTCACACTTGAGATGATCAGGAAATGGCTATTGTaGGAAGATCTGGAGTTGGTG +
Preference number: 4 (lower is better)
Translates to: TLWERESRLSSRVTLEMIRKWLL*EDLELV
Trigger: CACCAACTCCAGATCTTCGCACAATAGCCATTTCCT...GATCATCTCAAGTGTGACTCTGCTGGAAAGCCTGCTCTCCCTTTCCCACAGAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319104.7
CDS-3UTR GCA 90 bp AGTCTGGTACATGGCAGTGTGACAAACTCCTACTCACTCGCTTTTCAAGTTGGTAGGCTACTCTGTGTTTaGAGCATCGCCCAGGTTCCT +
Preference number: 4 (lower is better)
Translates to: SLVHGSVTNSYSLAFQVGRLLCV*SIAQVP
Trigger: AGGAACCTGGGCGATGCTGCAAACACAGAGTAGCCT...ACCAACTTGAAAAGCGAGTGAGTAGGAGTTTGTCACACTGCCATGTACCAGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527424.6
ENST00000534961.5
CDS-3UTR GCA 90 bp AGGCTGGAGTGCAGTGGCGCAATCCACCTCCTGGGTTTACGCCATTCTTCTGCCTTTTTCTGTGATGTATaGCACCCTTTTACCTATTTG +
Preference number: 4 (lower is better)
Translates to: RLECSGAIHLLGLRHSSAFFCDV*HPFTYL
Trigger: CAAATAGGTAAAAGGGTGGCATACATCACAGAAAAA...GGCAGAAGAATGGCGTAAACCCAGGAGGTGGATTGCGCCACTGCACTCCAGCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000527424.6
ENST00000534961.5
CDS-3UTR CCA 90 bp TCAGTGAAGGAGATTTCTGCCCTCAGGGAGCTAATGTTCTCAAAGACATTAGGGAGAACTGCTGTCGAGTaGCAGCAGGTGCATCCTGTT +
Preference number: 4 (lower is better)
Translates to: SVKEISALRELMFSKTLGRTAVE*QQVHPV
Trigger: AACAGGATGCACCTGCTGCCACTCGACAGCAGTTCT...CCCTAATGTCTTTGAGAACATTAGCTCCCTGAGGGCAGAAATCTCCTTCACTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319104.7
CDS-3UTR CCA 90 bp CGTTCCCAGTACCTTCCTATTGGCTTGATGCTCAAAGACACGAAGATTCACCTTAGAACTGCTGTCGAGTaGCAGCAGGTGCATCCTGTT +
Preference number: 4 (lower is better)
Translates to: RSQYLPIGLMLKDTKIHLRTAVE*QQVHPV
Trigger: AACAGGATGCACCTGCTGCCACTCGACAGCAGTTCT...AAGGTGAATCTTCGTGTCTTTGAGCATCAAGCCAATAGGAAGGTACTGGGAACG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527424.6
ENST00000534961.5
CDS-3UTR CCA 90 bp AGTGTAGAATTCGGATTCATGTCATCTCCACAGACCTTTCCTCTTAGGAGTGCCAAAGATGTCCACAGTTaGTCTCCACCGGGAAGGAGG +
Preference number: 4 (lower is better)
Translates to: SVEFGFMSSPQTFPLRSAKDVHS*SPPGRR
Trigger: CCTCCTTCCCGGTGGAGACCAACTGTGGACATCTTT...GGCACTCCTAAGAGGAAAGGTCTGTGGAGATGACATGAATCCGAATTCTACACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527424.6
ENST00000534961.5
CDS-3UTR CCA 90 bp CCCCACAGAGCTGCCCAAGTTATTATCTGCTCCTGGGGTTGGACCATCTGTTTTCGTTTGTCTACAGATTaGACAACTGATTGCCCCAAG +
Preference number: 4 (lower is better)
Translates to: PHRAAQVIICSWGWTICFRLSTD*TTDCPK
Trigger: CTTGGGGCAATCAGTTGTCCAATCTGTAGACAAACG...AAAACAGATGGTCCAACCCCAGGAGCAGATAATAACTTGGGCAGCTCTGTGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000527424.6
ENST00000534961.5
CDS-3UTR TCA 90 bp AAATGTCAATATGATGATGCTGTGCTGAGATGTCTGAATGCCTCAGAGTGCCCTTATATGCTGAGGCCCTaGCCTGCATCCGACTGTACA +
Preference number: 4 (lower is better)
Translates to: KCQYDDAVLRCLNASECPYMLRP*PASDCT
Trigger: TGTACAGTCGGATGCAGGTCAGGGCCTCAGCATATA...AGGGCACTCTGAGGCATTCAGACATCTCAGCACAGCATCATCATATTGACATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319104.7
CDS-3UTR TCA 90 bp CCCCACAGAGCTGCCCAAGTTATTATCTGCTCCTGGGGTTGGACCATCTGTTTTGAGAATTGTAGTAGTTaGAACCACTGTTCTAGTGGG +
Preference number: 4 (lower is better)
Translates to: PHRAAQVIICSWGWTICFENCSS*NHCSSG
Trigger: CCCACTAGAACAGTGGTTTCAACTACTACAATTCTC...AAAACAGATGGTCCAACCCCAGGAGCAGATAATAACTTGGGCAGCTCTGTGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000527424.6
ENST00000534961.5
CDS-3UTR GCA 90 bp TTCATTGCTTTATACTGCCATGGGTCCTTCTGTTTGATGTTCTACATTAGCTCACTTTCTAATTTGGAGTaGGGGTGCGGGCGCACGCGC +
Preference number: 4 (lower is better)
Translates to: FIALYCHGSFCLMFYISSLSNLE*GCGRTR
Trigger: GCGCGTGCGCCCGCACCCGCACTCCAAATTAGAAAG...TGAGCTAATGTAGAACATCAAACAGAAGGACCCATGGCAGTATAAAGCAATGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000240159.8
ENST00000526349.5
ENST00000534961.5
CDS-3UTR GCA 90 bp TGCTTGACAAACTCTTTAATCACAAGGTTTGAACCAAACCACCAGTCTTCTACACTTTCTAATTTGGAGTaGGGGTGCGGGCGCACGCGC +
Preference number: 4 (lower is better)
Translates to: CLTNSLITRFEPNHQSSTLSNLE*GCGRTR
Trigger: GCGCGTGCGCCCGCACCCGCACTCCAAATTAGAAAG...TGTAGAAGACTGGTGGTTTGGTTCAAACCTTGTGATTAAAGAGTTTGTCAAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534961.5
CDS-3UTR GCA 90 bp CCCCACAGAGCTGCCCAAGTTATTATCTGCTCCTGGGGTTGGACCATCTGTTTTATAATAGATCTGGGTTaGCCTGAGAATCTCCGGTTA +
Preference number: 4 (lower is better)
Translates to: PHRAAQVIICSWGWTICFIIDLG*PENLRL
Trigger: TAACCGGAGATTCTCAGGGCAACCCAGATCTATTAT...AAAACAGATGGTCCAACCCCAGGAGCAGATAATAACTTGGGCAGCTCTGTGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000527424.6
ENST00000534961.5
CDS-3UTR GCA 90 bp GCCCAAGTTATTATCTGCTCCTGGGGTTGGACCATCTGTTTTATGACAGTTATGTTTACGCCATTCTTCTaGCTCAGCCTCCCGAGTAGC +
Preference number: 4 (lower is better)
Translates to: AQVIICSWGWTICFMTVMFTPFF*LSLPSS
Trigger: GCTACTCGGGAGGCTGAGGCAGAAGAATGGCGTAAA...CATAACTGTCATAAAACAGATGGTCCAACCCCAGGAGCAGATAATAACTTGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000527424.6
ENST00000534961.5
CDS-3UTR GCA 90 bp TTCATTGCTTTATACTGCCATGGGTCCTTCTGTTTGATGTTCTACATTAGCTCATTGCCCAGGCTGGAGTaGAGTGGCGCAATCCACCTC +
Preference number: 4 (lower is better)
Translates to: FIALYCHGSFCLMFYISSLPRLE*SGAIHL
Trigger: GAGGTGGATTGCGCCACTGCACTCCAGCCTGGGCAA...TGAGCTAATGTAGAACATCAAACAGAAGGACCCATGGCAGTATAAAGCAATGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000240159.8
ENST00000527424.6
ENST00000534961.5
CDS-3UTR GCA 90 bp AGTGTAGAATTCGGATTCATGTCATCTCCACAGACCTTTCCTCTTAGGAGTGCCGCCCAAGTTATTATCTaGTCCTGGGGTTGGACCATC +
Preference number: 4 (lower is better)
Translates to: SVEFGFMSSPQTFPLRSAAQVII*SWGWTI
Trigger: GATGGTCCAACCCCAGGAGCAGATAATAACTTGGGC...GGCACTCCTAAGAGGAAAGGTCTGTGGAGATGACATGAATCCGAATTCTACACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527424.6
ENST00000534961.5
CDS-3UTR CCA 90 bp TCAGTGAAGGAGATTTCTGCCCTCAGGGAGCTAATGTTCTCAAAGACATTAGGGCTTGGTGCAGGCAGATaGGACAGTACATGTCAGTGT +
Preference number: 4 (lower is better)
Translates to: SVKEISALRELMFSKTLGLGAGR*DSTCQC
Trigger: ACACTGACATGTACTGTCCCATCTGCCTGCACCAAG...CCCTAATGTCTTTGAGAACATTAGCTCCCTGAGGGCAGAAATCTCCTTCACTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319104.7
CDS-3UTR CCA 90 bp CGTTCCCAGTACCTTCCTATTGGCTTGATGCTCAAAGACACGAAGATTCACCTTCTTGGTGCAGGCAGATaGGACAGTACATGTCAGTGT +
Preference number: 4 (lower is better)
Translates to: RSQYLPIGLMLKDTKIHLLGAGR*DSTCQC
Trigger: ACACTGACATGTACTGTCCCATCTGCCTGCACCAAG...AAGGTGAATCTTCGTGTCTTTGAGCATCAAGCCAATAGGAAGGTACTGGGAACG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527424.6
ENST00000534961.5
CDS-3UTR CCA 90 bp GAGTTTCACAGCTATATATTATCATATAGGTACCTGCTGAGAAGGATAAGATGGCAGGCTGGAGTGCAGTaGCGCAATCCACCTCCTGGG +
Preference number: 4 (lower is better)
Translates to: EFHSYILSYRYLLRRIRWQAGVQ*RNPPPG
Trigger: CCCAGGAGGTGGATTGCGCCACTGCACTCCAGCCTG...CCATCTTATCCTTCTCAGCAGGTACCTATATGATAATATATAGCTGTGAAACTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000240159.8
ENST00000527424.6
ENST00000534961.5
CDS-3UTR CCA 90 bp GCCCTCAGGGAGCTAATGTTCTCAAAGACATTAGGGAGGCAGATAGCAAACACGCGTTTGTCTACAGATTaGACAACTGATTGCCCCAAG +
Preference number: 4 (lower is better)
Translates to: ALRELMFSKTLGRQIANTRLSTD*TTDCPK
Trigger: CTTGGGGCAATCAGTTGTCCAATCTGTAGACAAACG...CGTGTTTGCTATCTGCCTCCCTAATGTCTTTGAGAACATTAGCTCCCTGAGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319104.7
CDS-3UTR TCA 90 bp AGTGTAGAATTCGGATTCATGTCATCTCCACAGACCTTTCCTCTTAGGAGTGCCGCATCCTGTTCTGTTTaGAGCTGTTCTCGAAGTACC +
Preference number: 4 (lower is better)
Translates to: SVEFGFMSSPQTFPLRSAASCSV*SCSRST
Trigger: GGTACTTCGAGAACAGCTTCAAACAGAACAGGATGC...GGCACTCCTAAGAGGAAAGGTCTGTGGAGATGACATGAATCCGAATTCTACACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527424.6
ENST00000534961.5
CDS-3UTR TCA 90 bp AGTCTGGTACATGGCAGTGTGACAAACTCCTACTCACTCGCTTTTCAAGTTGGTAGATCTGGGTTGCCCTaGGAATCTCCGGTTATAATC +
Preference number: 4 (lower is better)
Translates to: SLVHGSVTNSYSLAFQVGRSGLP*ESPVII
Trigger: GATTATAACCGGAGATTCTCAGGGCAACCCAGATCT...ACCAACTTGAAAAGCGAGTGAGTAGGAGTTTGTCACACTGCCATGTACCAGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527424.6
ENST00000534961.5
CDS-3UTR TCA 90 bp TACTGCCATGGGTCCTTCTGTTTGATGTTCTACATTAGCTCAGATATCCTAGTAATGGTCCTGATCTCCTaGCCTTGTGATCTACCCGCC +
Preference number: 4 (lower is better)
Translates to: YCHGSFCLMFYISSDILVMVLIS*PCDLPA
Trigger: GGCGGGTAGATCACAAGGTCAGGAGATCAGGACCAT...TACTAGGATATCTGAGCTAATGTAGAACATCAAACAGAAGGACCCATGGCAGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000240159.8
ENST00000527424.6
ENST00000534961.5
CDS-3UTR GCA 90 bp GAGTTTCACAGCTATATATTATCATATAGGTACCTGCTGAGAAGGATAAGATGGCTTTCTAATTTGGAGTaGGGGTGCGGGCGCACGCGC +
Preference number: 4 (lower is better)
Translates to: EFHSYILSYRYLLRRIRWLSNLE*GCGRTR
Trigger: GCGCGTGCGCCCGCACCCGCACTCCAAATTAGAAAG...CCATCTTATCCTTCTCAGCAGGTACCTATATGATAATATATAGCTGTGAAACTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000240159.8
ENST00000526349.5
ENST00000534961.5
CDS-3UTR GCA 90 bp TTCATTGCTTTATACTGCCATGGGTCCTTCTGTTTGATGTTCTACATTAGCTCAGGGAAGGAGGCTTGGTaGAGGCAGATGGGACAGTAC +
Preference number: 4 (lower is better)
Translates to: FIALYCHGSFCLMFYISSGKEAW*RQMGQY
Trigger: GTACTGTCCCATCTGCCTGCACCAAGCCTCCTTCCC...TGAGCTAATGTAGAACATCAAACAGAAGGACCCATGGCAGTATAAAGCAATGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000240159.8
ENST00000319073.5
ENST00000526349.5
ENST00000527424.6
ENST00000534961.5
CDS-3UTR GCA 90 bp ATGAAAGGGAAGTTGGTGTCCTGCGTTCCTCACAAAATTATCCAAAGGATAAAAGGGAAGGAGGCTTGGTaGAGGCAGATGGGACAGTAC +
Preference number: 4 (lower is better)
Translates to: MKGKLVSCVPHKIIQRIKGKEAW*RQMGQY
Trigger: GTACTGTCCCATCTGCCTGCACCAAGCCTCCTTCCC...TTTTATCCTTTGGATAATTTTGTGAGGAACGCAGGACACCAACTTCCCTTTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000527424.6
ENST00000534961.5
CDS-3UTR GCA 90 bp TGCTTGACAAACTCTTTAATCACAAGGTTTGAACCAAACCACCAGTCTTCTACAGGGAAGGAGGCTTGGTaGAGGCAGATGGGACAGTAC +
Preference number: 4 (lower is better)
Translates to: CLTNSLITRFEPNHQSSTGKEAW*RQMGQY
Trigger: GTACTGTCCCATCTGCCTGCACCAAGCCTCCTTCCC...TGTAGAAGACTGGTGGTTTGGTTCAAACCTTGTGATTAAAGAGTTTGTCAAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527424.6
ENST00000534961.5
CDS-3UTR GCA 90 bp ATGCTAACACTGACTCCTGGGCATCCCCTCACATCCTGCTGTCATACATTCACTATAATAGATCTGGGTTaGCCTGAGAATCTCCGGTTA +
Preference number: 4 (lower is better)
Translates to: MLTLTPGHPLTSCCHTFTIIDLG*PENLRL
Trigger: TAACCGGAGATTCTCAGGGCAACCCAGATCTATTAT...AGTGAATGTATGACAGCAGGATGTGAGGGGATGCCCAGGAGTCAGTGTTAGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527424.6
ENST00000534961.5
CDS-3UTR GCA 90 bp GAGTTTCACAGCTATATATTATCATATAGGTACCTGCTGAGAAGGATAAGATGGTTGCCCAGGCTGGAGTaGAGTGGCGCAATCCACCTC +
Preference number: 4 (lower is better)
Translates to: EFHSYILSYRYLLRRIRWLPRLE*SGAIHL
Trigger: GAGGTGGATTGCGCCACTGCACTCCAGCCTGGGCAA...CCATCTTATCCTTCTCAGCAGGTACCTATATGATAATATATAGCTGTGAAACTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000240159.8
ENST00000527424.6
ENST00000534961.5
CDS-3UTR CCA 90 bp TTCATTGCTTTATACTGCCATGGGTCCTTCTGTTTGATGTTCTACATTAGCTCAGTCCCCTTTCTAATTTaGAGTGCGGGTGCGGGCGCA +
Preference number: 4 (lower is better)
Translates to: FIALYCHGSFCLMFYISSVPFLI*SAGAGA
Trigger: TGCGCCCGCACCCGCACTCCAAATTAGAAAGGGGAC...TGAGCTAATGTAGAACATCAAACAGAAGGACCCATGGCAGTATAAAGCAATGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000240159.8
ENST00000526349.5
ENST00000534961.5
CDS-3UTR CCA 90 bp CCCCACAGAGCTGCCCAAGTTATTATCTGCTCCTGGGGTTGGACCATCTGTTTTCATCTAGTTAGCCTTTaGGTTATCACTTCTCGATAC +
Preference number: 4 (lower is better)
Translates to: PHRAAQVIICSWGWTICFHLVSL*VITSRY
Trigger: GTATCGAGAAGTGATAACCCAAAGGCTAACTAGATG...AAAACAGATGGTCCAACCCCAGGAGCAGATAATAACTTGGGCAGCTCTGTGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000527424.6
ENST00000534961.5
CDS-3UTR CCA 90 bp TTTCATAGAGCTTGTGTTCTAGTGAGAAGCAGACAGACAATGGAAATGTCAATAGCAAGGAGGGCTGGATaGCTGGAGCAGAGTGAGCTG +
Preference number: 4 (lower is better)
Translates to: FHRACVLVRSRQTMEMSIARRAG*LEQSEL
Trigger: CAGCTCACTCTGCTCCAGCCATCCAGCCCTCCTTGC...TATTGACATTTCCATTGTCTGTCTGCTTCTCACTAGAACACAAGCTCTATGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319104.7
CDS-3UTR CCA 90 bp GTACATGGCAGTGTGACAAACTCCTACTCACTCGCTTTTCAAGTTGGTGACTGCCAGAATTGTGACACTTaGAGCAGAATGCATGCACAC +
Preference number: 4 (lower is better)
Translates to: VHGSVTNSYSLAFQVGDCQNCDT*SRMHAH
Trigger: GTGTGCATGCATTCTGCTCCAAGTGTCACAATTCTG...GCAGTCACCAACTTGAAAAGCGAGTGAGTAGGAGTTTGTCACACTGCCATGTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527424.6
ENST00000534961.5
CDS-3UTR TCA 90 bp CGTTCCCAGTACCTTCCTATTGGCTTGATGCTCAAAGACACGAAGATTCACCTTCAATCAAAGCGAAACTaGCCACAACTGCCACAAGTA +
Preference number: 4 (lower is better)
Translates to: RSQYLPIGLMLKDTKIHLQSKRN*PQLPQV
Trigger: TACTTGTGGCAGTTGTGGTCAGTTTCGCTTTGATTG...AAGGTGAATCTTCGTGTCTTTGAGCATCAAGCCAATAGGAAGGTACTGGGAACG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527424.6
ENST00000534961.5
CDS-3UTR TCA 90 bp TGCTTGACAAACTCTTTAATCACAAGGTTTGAACCAAACCACCAGTCTTCTACAATGGTCCTGATCTCCTaGCCTTGTGATCTACCCGCC +
Preference number: 4 (lower is better)
Translates to: CLTNSLITRFEPNHQSSTMVLIS*PCDLPA
Trigger: GGCGGGTAGATCACAAGGTCAGGAGATCAGGACCAT...TGTAGAAGACTGGTGGTTTGGTTCAAACCTTGTGATTAAAGAGTTTGTCAAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527424.6
ENST00000534961.5
CDS-3UTR TCA 90 bp GCTTTATACTGCCATGGGTCCTTCTGTTTGATGTTCTACATTAGCTCAGATATCGATTGCCCCAAGCCATaGACCATATCGCCAGTAAGC +
Preference number: 4 (lower is better)
Translates to: ALYCHGSFCLMFYISSDIDCPKP*TISPVS
Trigger: GCTTACTGGCGATATGGTTCATGGCTTGGGGCAATC...GATATCTGAGCTAATGTAGAACATCAAACAGAAGGACCCATGGCAGTATAAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000526349.5
ENST00000527424.6
ENST00000534961.5
CDS-3UTR TCA 90 bp GCTTTATACTGCCATGGGTCCTTCTGTTTGATGTTCTACATTAGCTCAGATATCCAACGCCAGCTGAAGTaGGTAAGATCTCCCAGTACC +
Preference number: 4 (lower is better)
Translates to: ALYCHGSFCLMFYISSDIQRQLK*VRSPST
Trigger: GGTACTGGGAGATCTTACTCACTTCAGCTGGCGTTG...GATATCTGAGCTAATGTAGAACATCAAACAGAAGGACCCATGGCAGTATAAAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527424.6
ENST00000534961.5
CDS-3UTR TCA 90 bp AGTCTGGTACATGGCAGTGTGACAAACTCCTACTCACTCGCTTTTCAAGTTGGTTGGGGATTGTATCTATaGAAGGGAAGTTGGTGTCCT +
Preference number: 4 (lower is better)
Translates to: SLVHGSVTNSYSLAFQVGWGLYL*KGSWCP
Trigger: AGGACACCAACTTCCCTTTCATAGATACAATCCCCA...ACCAACTTGAAAAGCGAGTGAGTAGGAGTTTGTCACACTGCCATGTACCAGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000527424.6
ENST00000534961.5
CDS-3UTR GCA 90 bp GAGTTTCACAGCTATATATTATCATATAGGTACCTGCTGAGAAGGATAAGATGGGGGAAGGAGGCTTGGTaGAGGCAGATGGGACAGTAC +
Preference number: 4 (lower is better)
Translates to: EFHSYILSYRYLLRRIRWGKEAW*RQMGQY
Trigger: GTACTGTCCCATCTGCCTGCACCAAGCCTCCTTCCC...CCATCTTATCCTTCTCAGCAGGTACCTATATGATAATATATAGCTGTGAAACTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000240159.8
ENST00000319073.5
ENST00000526349.5
ENST00000527424.6
ENST00000534961.5
CDS-3UTR CCA 90 bp GAGTTTCACAGCTATATATTATCATATAGGTACCTGCTGAGAAGGATAAGATGGGTCCCCTTTCTAATTTaGAGTGCGGGTGCGGGCGCA +
Preference number: 4 (lower is better)
Translates to: EFHSYILSYRYLLRRIRWVPFLI*SAGAGA
Trigger: TGCGCCCGCACCCGCACTCCAAATTAGAAAGGGGAC...CCATCTTATCCTTCTCAGCAGGTACCTATATGATAATATATAGCTGTGAAACTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000240159.8
ENST00000526349.5
ENST00000534961.5
CDS-3UTR CCA 90 bp TACTGCCATGGGTCCTTCTGTTTGATGTTCTACATTAGCTCAGATATCCTAGTAAGAACTGCTGTCGAGTaGCAGCAGGTGCATCCTGTT +
Preference number: 4 (lower is better)
Translates to: YCHGSFCLMFYISSDILVRTAVE*QQVHPV
Trigger: AACAGGATGCACCTGCTGCCACTCGACAGCAGTTCT...TACTAGGATATCTGAGCTAATGTAGAACATCAAACAGAAGGACCCATGGCAGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000240159.8
ENST00000319073.5
ENST00000526349.5
ENST00000527424.6
ENST00000534961.5
CDS-3UTR CCA 90 bp TTTATTAGCATTACCATGGATATTGAGACTGCTGGGAATATCTCTGAGGTCCTCAAAGATGTCCACAGTTaGTCTCCACCGGGAAGGAGG +
Preference number: 4 (lower is better)
Translates to: FISITMDIETAGNISEVLKDVHS*SPPGRR
Trigger: CCTCCTTCCCGGTGGAGACCAACTGTGGACATCTTT...GAGGACCTCAGAGATATTCCCAGCAGTCTCAATATCCATGGTAATGCTAATAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319104.7
CDS-3UTR CCA 90 bp CCCCCGACTGAAAACATTTCCCTGAATGCATGCCTCAGTAAAGTGGGTAGATCCTGCTTTATACTGCCATaGGTCCTTCTGTTTGATGTT +
Preference number: 4 (lower is better)
Translates to: PPTENISLNACLSKVGRSCFILP*VLLFDV
Trigger: AACATCAAACAGAAGGACCCATGGCAGTATAAAGCA...GGATCTACCCACTTTACTGAGGCATGCATTCAGGGAAATGTTTTCAGTCGGGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000240159.8
ENST00000319073.5
CDS-3UTR CCA 90 bp AGTGTAGAATTCGGATTCATGTCATCTCCACAGACCTTTCCTCTTAGGAGTGCCCGTTTGTCTACAGATTaGACAACTGATTGCCCCAAG +
Preference number: 4 (lower is better)
Translates to: SVEFGFMSSPQTFPLRSARLSTD*TTDCPK
Trigger: CTTGGGGCAATCAGTTGTCCAATCTGTAGACAAACG...GGCACTCCTAAGAGGAAAGGTCTGTGGAGATGACATGAATCCGAATTCTACACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527424.6
ENST00000534961.5
CDS-3UTR CCA 90 bp CGTTCCCAGTACCTTCCTATTGGCTTGATGCTCAAAGACACGAAGATTCACCTTCAGAATTGTGACACTTaGAGCAGAATGCATGCACAC +
Preference number: 4 (lower is better)
Translates to: RSQYLPIGLMLKDTKIHLQNCDT*SRMHAH
Trigger: GTGTGCATGCATTCTGCTCCAAGTGTCACAATTCTG...AAGGTGAATCTTCGTGTCTTTGAGCATCAAGCCAATAGGAAGGTACTGGGAACG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527424.6
ENST00000534961.5
CDS-3UTR TCA 90 bp AGGCCCCCGACTGAAAACATTTCCCTGAATGCATGCCTCAGTAAAGTGGGTAGATTTGATGTACATTTCTaGAAAGTGCATATACCAGGG +
Preference number: 4 (lower is better)
Translates to: RPPTENISLNACLSKVGRFDVHF*KVHIPG
Trigger: CCCTGGTATATGCACTTTTCAGAAATGTACATCAAA...TCTACCCACTTTACTGAGGCATGCATTCAGGGAAATGTTTTCAGTCGGGGGCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000240159.8
ENST00000319073.5
CDS-3UTR TCA 90 bp ATGCTAACACTGACTCCTGGGCATCCCCTCACATCCTGCTGTCATACATTCACTTTTGATGTACATTTCTaGAAAGTGCATATACCAGGG +
Preference number: 4 (lower is better)
Translates to: MLTLTPGHPLTSCCHTFTFDVHF*KVHIPG
Trigger: CCCTGGTATATGCACTTTTCAGAAATGTACATCAAA...AGTGAATGTATGACAGCAGGATGTGAGGGGATGCCCAGGAGTCAGTGTTAGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000527424.6
ENST00000534961.5
CDS-3UTR TCA 90 bp AGTCTGGTACATGGCAGTGTGACAAACTCCTACTCACTCGCTTTTCAAGTTGGTCTGAAAACATTTCCCTaGATGCATGCCTCAGTAAAG +
Preference number: 4 (lower is better)
Translates to: SLVHGSVTNSYSLAFQVGLKTFP*MHASVK
Trigger: CTTTACTGAGGCATGCATTCAGGGAAATGTTTTCAG...ACCAACTTGAAAAGCGAGTGAGTAGGAGTTTGTCACACTGCCATGTACCAGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000527424.6
ENST00000534961.5
CDS-3UTR TCA 90 bp AGTGTAGAATTCGGATTCATGTCATCTCCACAGACCTTTCCTCTTAGGAGTGCCAGTACCATGTGGTACTaGGTCTTCTCAGATACATTC +
Preference number: 4 (lower is better)
Translates to: SVEFGFMSSPQTFPLRSASTMWY*VFSDTF
Trigger: GAATGTATCTGAGAAGACTCAGTACCACATGGTACT...GGCACTCCTAAGAGGAAAGGTCTGTGGAGATGACATGAATCCGAATTCTACACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527424.6
ENST00000534961.5
CDS-3UTR TCA 90 bp AGTGTAGAATTCGGATTCATGTCATCTCCACAGACCTTTCCTCTTAGGAGTGCCCGCTTTTCAAGTTGGTaGCTGCAGCTGAAATGTTTT +
Preference number: 4 (lower is better)
Translates to: SVEFGFMSSPQTFPLRSARFSSW*LQLKCF
Trigger: AAAACATTTCAGCTGCAGTCACCAACTTGAAAAGCG...GGCACTCCTAAGAGGAAAGGTCTGTGGAGATGACATGAATCCGAATTCTACACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527424.6
ENST00000534961.5
CDS-3UTR TCA 90 bp CGTTCCCAGTACCTTCCTATTGGCTTGATGCTCAAAGACACGAAGATTCACCTTCGCTTTTCAAGTTGGTaGCTGCAGCTGAAATGTTTT +
Preference number: 4 (lower is better)
Translates to: RSQYLPIGLMLKDTKIHLRFSSW*LQLKCF
Trigger: AAAACATTTCAGCTGCAGTCACCAACTTGAAAAGCG...AAGGTGAATCTTCGTGTCTTTGAGCATCAAGCCAATAGGAAGGTACTGGGAACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527424.6
ENST00000534961.5
CDS-3UTR TCA 90 bp GCCCAAGTTATTATCTGCTCCTGGGGTTGGACCATCTGTTTTATGACAGTTATGGCAGGTCTAAAGTTCTaGGATGTTAGCACATACCCT +
Preference number: 4 (lower is better)
Translates to: AQVIICSWGWTICFMTVMAGLKF*DVSTYP
Trigger: AGGGTATGTGCTAACATCTCAGAACTTTAGACCTGC...CATAACTGTCATAAAACAGATGGTCCAACCCCAGGAGCAGATAATAACTTGGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000527424.6
ENST00000534961.5
CDS-3UTR GCA 90 bp GTTATAATCATTAATATCCTGATGCAATCTCAGAACATCCTGAGACTGATCATCGGGAAGGAGGCTTGGTaGAGGCAGATGGGACAGTAC +
Preference number: 4 (lower is better)
Translates to: VIIINILMQSQNILRLIIGKEAW*RQMGQY
Trigger: GTACTGTCCCATCTGCCTGCACCAAGCCTCCTTCCC...GATGATCAGTCTCAGGATGTTCTGAGATTGCATCAGGATATTAATGATTATAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240159.8
ENST00000319073.5
CDS-3UTR GCA 90 bp AAATGTCAATATGATGATGCTGTGCTGAGATGTCTGAATGCCTCAGAGTGCCCTAGTGAAGGAGATTTCTaGCCTCAGGGAGCTAATGTT +
Preference number: 4 (lower is better)
Translates to: KCQYDDAVLRCLNASECPSEGDF*PQGANV
Trigger: AACATTAGCTCCCTGAGGGCAGAAATCTCCTTCACT...AGGGCACTCTGAGGCATTCAGACATCTCAGCACAGCATCATCATATTGACATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319104.7
CDS-3UTR CCA 90 bp TTCATTGCTTTATACTGCCATGGGTCCTTCTGTTTGATGTTCTACATTAGCTCAAGAACTGCTGTCGAGTaGCAGCAGGTGCATCCTGTT +
Preference number: 4 (lower is better)
Translates to: FIALYCHGSFCLMFYISSRTAVE*QQVHPV
Trigger: AACAGGATGCACCTGCTGCCACTCGACAGCAGTTCT...TGAGCTAATGTAGAACATCAAACAGAAGGACCCATGGCAGTATAAAGCAATGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000240159.8
ENST00000319073.5
ENST00000526349.5
ENST00000527424.6
ENST00000534961.5
CDS-3UTR CCA 90 bp GCTTTATACTGCCATGGGTCCTTCTGTTTGATGTTCTACATTAGCTCAGATATCCTTGGTGCAGGCAGATaGGACAGTACATGTCAGTGT +
Preference number: 4 (lower is better)
Translates to: ALYCHGSFCLMFYISSDILGAGR*DSTCQC
Trigger: ACACTGACATGTACTGTCCCATCTGCCTGCACCAAG...GATATCTGAGCTAATGTAGAACATCAAACAGAAGGACCCATGGCAGTATAAAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000240159.8
ENST00000319073.5
ENST00000526349.5
ENST00000527424.6
ENST00000534961.5
CDS-3UTR CCA 90 bp ATGAAAGGGAAGTTGGTGTCCTGCGTTCCTCACAAAATTATCCAAAGGATAAAAAAAGATGTCCACAGTTaGTCTCCACCGGGAAGGAGG +
Preference number: 4 (lower is better)
Translates to: MKGKLVSCVPHKIIQRIKKDVHS*SPPGRR
Trigger: CCTCCTTCCCGGTGGAGACCAACTGTGGACATCTTT...TTTTATCCTTTGGATAATTTTGTGAGGAACGCAGGACACCAACTTCCCTTTCAT
44% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000527424.6
ENST00000534961.5
CDS-3UTR CCA 90 bp AAATGTCAATATGATGATGCTGTGCTGAGATGTCTGAATGCCTCAGAGTGCCCTCTTCACCTTGATATTTaGCCATTCCAGGTCTCTCCA +
Preference number: 4 (lower is better)
Translates to: KCQYDDAVLRCLNASECPLHLDI*PFQVSP
Trigger: TGGAGAGACCTGGAATGGCCAAATATCAAGGTGAAG...AGGGCACTCTGAGGCATTCAGACATCTCAGCACAGCATCATCATATTGACATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319104.7
CDS-3UTR CCA 90 bp CGTTCCCAGTACCTTCCTATTGGCTTGATGCTCAAAGACACGAAGATTCACCTTGTTATTATCTGCTCCTaGGGTTGGACCATCTGTTTT +
Preference number: 4 (lower is better)
Translates to: RSQYLPIGLMLKDTKIHLVIICS*GWTICF
Trigger: AAAACAGATGGTCCAACCCCAGGAGCAGATAATAAC...AAGGTGAATCTTCGTGTCTTTGAGCATCAAGCCAATAGGAAGGTACTGGGAACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527424.6
ENST00000534961.5
CDS-3UTR TCA 90 bp TACTGCCATGGGTCCTTCTGTTTGATGTTCTACATTAGCTCAGATATCCTAGTAAGATCTGGGTTGCCCTaGGAATCTCCGGTTATAATC +
Preference number: 4 (lower is better)
Translates to: YCHGSFCLMFYISSDILVRSGLP*ESPVII
Trigger: GATTATAACCGGAGATTCTCAGGGCAACCCAGATCT...TACTAGGATATCTGAGCTAATGTAGAACATCAAACAGAAGGACCCATGGCAGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000240159.8
ENST00000319073.5
ENST00000526349.5
ENST00000527424.6
ENST00000534961.5
CDS-3UTR TCA 90 bp GCCCAAGTTATTATCTGCTCCTGGGGTTGGACCATCTGTTTTATGACAGTTATGCTGAAAACATTTCCCTaGATGCATGCCTCAGTAAAG +
Preference number: 4 (lower is better)
Translates to: AQVIICSWGWTICFMTVMLKTFP*MHASVK
Trigger: CTTTACTGAGGCATGCATTCAGGGAAATGTTTTCAG...CATAACTGTCATAAAACAGATGGTCCAACCCCAGGAGCAGATAATAACTTGGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000527424.6
ENST00000534961.5
CDS-3UTR TCA 90 bp TTTCATAGAGCTTGTGTTCTAGTGAGAAGCAGACAGACAATGGAAATGTCAATAGATTGCCCCAAGCCATaGACCATATCGCCAGTAAGC +
Preference number: 4 (lower is better)
Translates to: FHRACVLVRSRQTMEMSIDCPKP*TISPVS
Trigger: GCTTACTGGCGATATGGTTCATGGCTTGGGGCAATC...TATTGACATTTCCATTGTCTGTCTGCTTCTCACTAGAACACAAGCTCTATGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319104.7
CDS-3UTR TCA 90 bp TACTGCCATGGGTCCTTCTGTTTGATGTTCTACATTAGCTCAGATATCCTAGTATACAGATTGGACAACTaGTTGCCCCAAGCCATGAAC +
Preference number: 4 (lower is better)
Translates to: YCHGSFCLMFYISSDILVYRLDN*LPQAMN
Trigger: GTTCATGGCTTGGGGCAATCAGTTGTCCAATCTGTA...TACTAGGATATCTGAGCTAATGTAGAACATCAAACAGAAGGACCCATGGCAGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000526349.5
ENST00000527424.6
ENST00000534961.5
CDS-3UTR TCA 90 bp CGTTCCCAGTACCTTCCTATTGGCTTGATGCTCAAAGACACGAAGATTCACCTTTATTGTTTTTCTCTATaGCAAGCAACAGCTCTGTCC +
Preference number: 4 (lower is better)
Translates to: RSQYLPIGLMLKDTKIHLYCFSL*QATALS
Trigger: GGACAGAGCTGTTGCTTGTCATAGAGAAAAACAATA...AAGGTGAATCTTCGTGTCTTTGAGCATCAAGCCAATAGGAAGGTACTGGGAACG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000527424.6
ENST00000534961.5
CDS-3UTR TCA 90 bp AGTGTAGAATTCGGATTCATGTCATCTCCACAGACCTTTCCTCTTAGGAGTGCCTTTAATCACAAGGTTTaGACCAAACCACCAGTCTTC +
Preference number: 4 (lower is better)
Translates to: SVEFGFMSSPQTFPLRSAFNHKV*TKPPVF
Trigger: GAAGACTGGTGGTTTGGTTCAAACCTTGTGATTAAA...GGCACTCCTAAGAGGAAAGGTCTGTGGAGATGACATGAATCCGAATTCTACACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527424.6
ENST00000534961.5
CDS-3UTR GCA 90 bp GCTTTATACTGCCATGGGTCCTTCTGTTTGATGTTCTACATTAGCTCAGATATCGAAACTGACCACAACTaGCACAAGTACTTGGTCGCT +
Preference number: 4 (lower is better)
Translates to: ALYCHGSFCLMFYISSDIETDHN*HKYLVA
Trigger: AGCGACCAAGTACTTGTGGCAGTTGTGGTCAGTTTC...GATATCTGAGCTAATGTAGAACATCAAACAGAAGGACCCATGGCAGTATAAAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000240159.8
ENST00000319073.5
ENST00000527424.6
ENST00000534961.5
CDS-3UTR GCA 90 bp AGTCTGGTACATGGCAGTGTGACAAACTCCTACTCACTCGCTTTTCAAGTTGGTTTCATTGCTTTATACTaGCATGGGTCCTTCTGTTTG +
Preference number: 4 (lower is better)
Translates to: SLVHGSVTNSYSLAFQVGFIALY*HGSFCL
Trigger: CAAACAGAAGGACCCATGGCAGTATAAAGCAATGAA...ACCAACTTGAAAAGCGAGTGAGTAGGAGTTTGTCACACTGCCATGTACCAGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527424.6
ENST00000534961.5
CDS-3UTR GCA 90 bp TGCTTGACAAACTCTTTAATCACAAGGTTTGAACCAAACCACCAGTCTTCTACAGCCCAAGTTATTATCTaGTCCTGGGGTTGGACCATC +
Preference number: 4 (lower is better)
Translates to: CLTNSLITRFEPNHQSSTAQVII*SWGWTI
Trigger: GATGGTCCAACCCCAGGAGCAGATAATAACTTGGGC...TGTAGAAGACTGGTGGTTTGGTTCAAACCTTGTGATTAAAGAGTTTGTCAAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527424.6
ENST00000534961.5
CDS-3UTR GCA 90 bp TACTGCCATGGGTCCTTCTGTTTGATGTTCTACATTAGCTCAGATATCCTAGTATGTTCCCCACAGAGCTaGCCAAGTTATTATCTGCTC +
Preference number: 4 (lower is better)
Translates to: YCHGSFCLMFYISSDILVCSPQS*PSYYLL
Trigger: GAGCAGATAATAACTTGGGCAGCTCTGTGGGGAACA...TACTAGGATATCTGAGCTAATGTAGAACATCAAACAGAAGGACCCATGGCAGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527424.6
ENST00000534961.5
CDS-3UTR CCA 90 bp GAGTTTCACAGCTATATATTATCATATAGGTACCTGCTGAGAAGGATAAGATGGAAAGATGTCCACAGTTaGTCTCCACCGGGAAGGAGG +
Preference number: 4 (lower is better)
Translates to: EFHSYILSYRYLLRRIRWKDVHS*SPPGRR
Trigger: CCTCCTTCCCGGTGGAGACCAACTGTGGACATCTTT...CCATCTTATCCTTCTCAGCAGGTACCTATATGATAATATATAGCTGTGAAACTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000240159.8
ENST00000319073.5
ENST00000526349.5
ENST00000527424.6
ENST00000534961.5
CDS-3UTR CCA 90 bp AGTGTAGAATTCGGATTCATGTCATCTCCACAGACCTTTCCTCTTAGGAGTGCCCATCTAGTTAGCCTTTaGGTTATCACTTCTCGATAC +
Preference number: 4 (lower is better)
Translates to: SVEFGFMSSPQTFPLRSAHLVSL*VITSRY
Trigger: GTATCGAGAAGTGATAACCCAAAGGCTAACTAGATG...GGCACTCCTAAGAGGAAAGGTCTGTGGAGATGACATGAATCCGAATTCTACACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527424.6
ENST00000534961.5
CDS-3UTR CCA 90 bp AACATTTCCCTGAATGCATGCCTCAGTAAAGTGGGTAGATCCATAATTCTCTCCCTTCACCTTGATATTTaGCCATTCCAGGTCTCTCCA +
Preference number: 4 (lower is better)
Translates to: NISLNACLSKVGRSIILSLHLDI*PFQVSP
Trigger: TGGAGAGACCTGGAATGGCCAAATATCAAGGTGAAG...GGAGAGAATTATGGATCTACCCACTTTACTGAGGCATGCATTCAGGGAAATGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319073.5
3UTR CAA 72 bp AAATGTAAATACCGTTCCCAGTACCTTCCTATTGGCTaGATGCTCAAAGACACGAAGATTCACCTTCCTCAG +
Preference number: 4 (lower is better)
Translates to: KCKYRSQYLPIG*MLKDTKIHLPQ
Trigger: CTGAGGAAGGTGAATCTTCGTGTCTTTGAGCATCAAGCCAATAGGAAGGTACTGGGAACGGTATTTACATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527424.6
ENST00000534961.5
3UTR CAA 72 bp CCACAGAGCTGCCCAAGTTATTATCTGCTCCTGGGGTaGGACCATCTGTTTTATGACAGTTATGATATTGTT +
Preference number: 4 (lower is better)
Translates to: PQSCPSYYLLLG*DHLFYDSYDIV
Trigger: AACAATATCATAACTGTCATAAAACAGATGGTCCAACCCCAGGAGCAGATAATAACTTGGGCAGCTCTGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000527424.6
ENST00000534961.5
CDS-3UTR TCA 90 bp TACTGCCATGGGTCCTTCTGTTTGATGTTCTACATTAGCTCAGATATCCTAGTACAATCAAAGCGAAACTaGCCACAACTGCCACAAGTA +
Preference number: 4 (lower is better)
Translates to: YCHGSFCLMFYISSDILVQSKRN*PQLPQV
Trigger: TACTTGTGGCAGTTGTGGTCAGTTTCGCTTTGATTG...TACTAGGATATCTGAGCTAATGTAGAACATCAAACAGAAGGACCCATGGCAGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000240159.8
ENST00000319073.5
ENST00000527424.6
ENST00000534961.5
CDS-3UTR TCA 90 bp GCTTTATACTGCCATGGGTCCTTCTGTTTGATGTTCTACATTAGCTCAGATATCCAATCAAAGCGAAACTaGCCACAACTGCCACAAGTA +
Preference number: 4 (lower is better)
Translates to: ALYCHGSFCLMFYISSDIQSKRN*PQLPQV
Trigger: TACTTGTGGCAGTTGTGGTCAGTTTCGCTTTGATTG...GATATCTGAGCTAATGTAGAACATCAAACAGAAGGACCCATGGCAGTATAAAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000240159.8
ENST00000319073.5
ENST00000527424.6
ENST00000534961.5
CDS-3UTR TCA 90 bp TTCATTGCTTTATACTGCCATGGGTCCTTCTGTTTGATGTTCTACATTAGCTCAGCATCCTGTTCTGTTTaGAGCTGTTCTCGAAGTACC +
Preference number: 4 (lower is better)
Translates to: FIALYCHGSFCLMFYISSASCSV*SCSRST
Trigger: GGTACTTCGAGAACAGCTTCAAACAGAACAGGATGC...TGAGCTAATGTAGAACATCAAACAGAAGGACCCATGGCAGTATAAAGCAATGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000240159.8
ENST00000319073.5
ENST00000526349.5
ENST00000527424.6
ENST00000534961.5
CDS-3UTR TCA 90 bp TATCTAAACATTCTATGCAGGAGTCCTACTAAGAAATTTTGGTGTAATGCCACTGATTGCCCCAAGCCATaGACCATATCGCCAGTAAGC +
Preference number: 4 (lower is better)
Translates to: YLNILCRSPTKKFWCNATDCPKP*TISPVS
Trigger: GCTTACTGGCGATATGGTTCATGGCTTGGGGCAATC...AGTGGCATTACACCAAAATTTCTTAGTAGGACTCCTGCATAGAATGTTTAGATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000527424.6
ENST00000534961.5
CDS-3UTR TCA 90 bp CTTTATTTATTAATCTTTAATGTGTTGAGCACTACTGTGGTGGCAGGCATAATGTGCTGGGAATATCTCTaGGGTCCTCTGTGCCTGTGT +
Preference number: 4 (lower is better)
Translates to: LYLLIFNVLSTTVVAGIMCWEYL*GPLCLC
Trigger: ACACAGGCACAGAGGACCTCAGAGATATTCCCAGCA...CATTATGCCTGCCACCACAGTAGTGCTCAACACATTAAAGATTAATAAATAAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319104.7
CDS-3UTR TCA 90 bp GCTTTATACTGCCATGGGTCCTTCTGTTTGATGTTCTACATTAGCTCAGATATCACCTTCCTATTGGCTTaGTGCTCAAAGACACGAAGA +
Preference number: 4 (lower is better)
Translates to: ALYCHGSFCLMFYISSDITFLLA*CSKTRR
Trigger: TCTTCGTGTCTTTGAGCATCAAGCCAATAGGAAGGT...GATATCTGAGCTAATGTAGAACATCAAACAGAAGGACCCATGGCAGTATAAAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527424.6
ENST00000534961.5
CDS-3UTR TCA 90 bp TACTGCCATGGGTCCTTCTGTTTGATGTTCTACATTAGCTCAGATATCCTAGTAACCTTCCTATTGGCTTaGTGCTCAAAGACACGAAGA +
Preference number: 4 (lower is better)
Translates to: YCHGSFCLMFYISSDILVTFLLA*CSKTRR
Trigger: TCTTCGTGTCTTTGAGCATCAAGCCAATAGGAAGGT...TACTAGGATATCTGAGCTAATGTAGAACATCAAACAGAAGGACCCATGGCAGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527424.6
ENST00000534961.5
CDS-3UTR TCA 90 bp CGTTCCCAGTACCTTCCTATTGGCTTGATGCTCAAAGACACGAAGATTCACCTTTGTGTGCTGCCATCCTaGGACAGTATTATAAAAATT +
Preference number: 4 (lower is better)
Translates to: RSQYLPIGLMLKDTKIHLCVLPS*DSIIKI
Trigger: AATTTTTATAATACTGTCTCAGGATGGCAGCACACA...AAGGTGAATCTTCGTGTCTTTGAGCATCAAGCCAATAGGAAGGTACTGGGAACG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000527424.6
ENST00000534961.5
CDS-3UTR TCA 90 bp AGTCTGGTACATGGCAGTGTGACAAACTCCTACTCACTCGCTTTTCAAGTTGGTGGTGTAATGCCACTTTaGTCAGTTATTTGTTGTATG +
Preference number: 4 (lower is better)
Translates to: SLVHGSVTNSYSLAFQVGGVMPL*SVICCM
Trigger: CATACAACAAATAACTGATCAAAGTGGCATTACACC...ACCAACTTGAAAAGCGAGTGAGTAGGAGTTTGTCACACTGCCATGTACCAGACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527424.6
ENST00000534961.5
CDS-3UTR TCA 90 bp GCTTTATACTGCCATGGGTCCTTCTGTTTGATGTTCTACATTAGCTCAGATATCTCTACAACAACTCTGTaGGGTAGGTATCTGCATAGC +
Preference number: 4 (lower is better)
Translates to: ALYCHGSFCLMFYISSDISTTTL*GRYLHS
Trigger: GCTATGCAGATACCTACCTCACAGAGTTGTTGTAGA...GATATCTGAGCTAATGTAGAACATCAAACAGAAGGACCCATGGCAGTATAAAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527424.6
ENST00000534961.5
CDS-3UTR GCA 90 bp TTCATTGCTTTATACTGCCATGGGTCCTTCTGTTTGATGTTCTACATTAGCTCAGAAACTGACCACAACTaGCACAAGTACTTGGTCGCT +
Preference number: 4 (lower is better)
Translates to: FIALYCHGSFCLMFYISSETDHN*HKYLVA
Trigger: AGCGACCAAGTACTTGTGGCAGTTGTGGTCAGTTTC...TGAGCTAATGTAGAACATCAAACAGAAGGACCCATGGCAGTATAAAGCAATGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000240159.8
ENST00000319073.5
ENST00000527424.6
ENST00000534961.5
CDS-3UTR GCA 90 bp AGTCTGGTACATGGCAGTGTGACAAACTCCTACTCACTCGCTTTTCAAGTTGGTATGAAAAGGCAGAACTaGTCCAAATGCACAAAACTT +
Preference number: 4 (lower is better)
Translates to: SLVHGSVTNSYSLAFQVGMKRQN*SKCTKL
Trigger: AAGTTTTGTGCATTTGGAGCAGTTCTGCCTTTTCAT...ACCAACTTGAAAAGCGAGTGAGTAGGAGTTTGTCACACTGCCATGTACCAGACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000527424.6
ENST00000534961.5
CDS-3UTR GCA 90 bp AGTCTGGTACATGGCAGTGTGACAAACTCCTACTCACTCGCTTTTCAAGTTGGTTTGGAGCAGAATGCATaGACACAAAATAAAATCCTG +
Preference number: 4 (lower is better)
Translates to: SLVHGSVTNSYSLAFQVGLEQNA*TQNKIL
Trigger: CAGGATTTTATTTTGTGTGCATGCATTCTGCTCCAA...ACCAACTTGAAAAGCGAGTGAGTAGGAGTTTGTCACACTGCCATGTACCAGACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000527424.6
ENST00000534961.5
CDS-3UTR GCA 90 bp GTACATGGCAGTGTGACAAACTCCTACTCACTCGCTTTTCAAGTTGGTGACTGCCTGATTGACTCTACTTaGTTTAAAAACTCTCAGATC +
Preference number: 4 (lower is better)
Translates to: VHGSVTNSYSLAFQVGDCLIDST*FKNSQI
Trigger: GATCTGAGAGTTTTTAAAGCAAGTAGAGTCAATCAG...GCAGTCACCAACTTGAAAAGCGAGTGAGTAGGAGTTTGTCACACTGCCATGTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000527424.6
ENST00000534961.5
CDS-3UTR GCA 90 bp TTCATTGCTTTATACTGCCATGGGTCCTTCTGTTTGATGTTCTACATTAGCTCATGTTCCCCACAGAGCTaGCCAAGTTATTATCTGCTC +
Preference number: 4 (lower is better)
Translates to: FIALYCHGSFCLMFYISSCSPQS*PSYYLL
Trigger: GAGCAGATAATAACTTGGGCAGCTCTGTGGGGAACA...TGAGCTAATGTAGAACATCAAACAGAAGGACCCATGGCAGTATAAAGCAATGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527424.6
ENST00000534961.5
CDS-3UTR CCA 90 bp GAGTTTCACAGCTATATATTATCATATAGGTACCTGCTGAGAAGGATAAGATGGCTTGGTGCAGGCAGATaGGACAGTACATGTCAGTGT +
Preference number: 4 (lower is better)
Translates to: EFHSYILSYRYLLRRIRWLGAGR*DSTCQC
Trigger: ACACTGACATGTACTGTCCCATCTGCCTGCACCAAG...CCATCTTATCCTTCTCAGCAGGTACCTATATGATAATATATAGCTGTGAAACTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000240159.8
ENST00000319073.5
ENST00000526349.5
ENST00000527424.6
ENST00000534961.5
CDS-3UTR TCA 90 bp GAGTTTCACAGCTATATATTATCATATAGGTACCTGCTGAGAAGGATAAGATGGTACAGATTGGACAACTaGTTGCCCCAAGCCATGAAC +
Preference number: 4 (lower is better)
Translates to: EFHSYILSYRYLLRRIRWYRLDN*LPQAMN
Trigger: GTTCATGGCTTGGGGCAATCAGTTGTCCAATCTGTA...CCATCTTATCCTTCTCAGCAGGTACCTATATGATAATATATAGCTGTGAAACTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000526349.5
ENST00000527424.6
ENST00000534961.5
CDS-3UTR TCA 90 bp ATGAAAGGGAAGTTGGTGTCCTGCGTTCCTCACAAAATTATCCAAAGGATAAAAGCAGGTCTAAAGTTCTaGGATGTTAGCACATACCCT +
Preference number: 4 (lower is better)
Translates to: MKGKLVSCVPHKIIQRIKAGLKF*DVSTYP
Trigger: AGGGTATGTGCTAACATCTCAGAACTTTAGACCTGC...TTTTATCCTTTGGATAATTTTGTGAGGAACGCAGGACACCAACTTCCCTTTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000527424.6
ENST00000534961.5
CDS-3UTR TCA 90 bp TGCTTGACAAACTCTTTAATCACAAGGTTTGAACCAAACCACCAGTCTTCTACATCTACAACAACTCTGTaGGGTAGGTATCTGCATAGC +
Preference number: 4 (lower is better)
Translates to: CLTNSLITRFEPNHQSSTSTTTL*GRYLHS
Trigger: GCTATGCAGATACCTACCTCACAGAGTTGTTGTAGA...TGTAGAAGACTGGTGGTTTGGTTCAAACCTTGTGATTAAAGAGTTTGTCAAGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527424.6
ENST00000534961.5
CDS-3UTR GCA 90 bp TCAGTGAAGGAGATTTCTGCCCTCAGGGAGCTAATGTTCTCAAAGACATTAGGGTACATTTCTGAAAAGTaGATATACCAGGGTAGCAAT +
Preference number: 4 (lower is better)
Translates to: SVKEISALRELMFSKTLGYISEK*IYQGSN
Trigger: ATTGCTACCCTGGTATATGCACTTTTCAGAAATGTA...CCCTAATGTCTTTGAGAACATTAGCTCCCTGAGGGCAGAAATCTCCTTCACTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319104.7
CDS-3UTR GCA 90 bp GCTTTATACTGCCATGGGTCCTTCTGTTTGATGTTCTACATTAGCTCAGATATCATAATAGATCTGGGTTaGCCTGAGAATCTCCGGTTA +
Preference number: 4 (lower is better)
Translates to: ALYCHGSFCLMFYISSDIIIDLG*PENLRL
Trigger: TAACCGGAGATTCTCAGGGCAACCCAGATCTATTAT...GATATCTGAGCTAATGTAGAACATCAAACAGAAGGACCCATGGCAGTATAAAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000240159.8
ENST00000319073.5
ENST00000526349.5
ENST00000527424.6
ENST00000534961.5
CDS-3UTR GCA 90 bp GCTTTATACTGCCATGGGTCCTTCTGTTTGATGTTCTACATTAGCTCAGATATCACTCCATTGCTTCATTaGTTTATACTGCCATGGGTC +
Preference number: 4 (lower is better)
Translates to: ALYCHGSFCLMFYISSDITPLLH*FILPWV
Trigger: GACCCATGGCAGTATAAAGCAATGAAGCAATGGAGT...GATATCTGAGCTAATGTAGAACATCAAACAGAAGGACCCATGGCAGTATAAAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000240159.8
ENST00000319073.5
ENST00000526349.5
ENST00000527424.6
ENST00000534961.5
CDS-3UTR GCA 90 bp GCCCAAGTTATTATCTGCTCCTGGGGTTGGACCATCTGTTTTATGACAGTTATGATGAAAAGGCAGAACTaGTCCAAATGCACAAAACTT +
Preference number: 4 (lower is better)
Translates to: AQVIICSWGWTICFMTVMMKRQN*SKCTKL
Trigger: AAGTTTTGTGCATTTGGAGCAGTTCTGCCTTTTCAT...CATAACTGTCATAAAACAGATGGTCCAACCCCAGGAGCAGATAATAACTTGGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000527424.6
ENST00000534961.5
CDS-3UTR CCA 90 bp ATGAAAGGGAAGTTGGTGTCCTGCGTTCCTCACAAAATTATCCAAAGGATAAAACTTCACCTTGATATTTaGCCATTCCAGGTCTCTCCA +
Preference number: 4 (lower is better)
Translates to: MKGKLVSCVPHKIIQRIKLHLDI*PFQVSP
Trigger: TGGAGAGACCTGGAATGGCCAAATATCAAGGTGAAG...TTTTATCCTTTGGATAATTTTGTGAGGAACGCAGGACACCAACTTCCCTTTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527424.6
CDS-3UTR CCA 90 bp TTCATTGCTTTATACTGCCATGGGTCCTTCTGTTTGATGTTCTACATTAGCTCACGTTTGTCTACAGATTaGACAACTGATTGCCCCAAG +
Preference number: 4 (lower is better)
Translates to: FIALYCHGSFCLMFYISSRLSTD*TTDCPK
Trigger: CTTGGGGCAATCAGTTGTCCAATCTGTAGACAAACG...TGAGCTAATGTAGAACATCAAACAGAAGGACCCATGGCAGTATAAAGCAATGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000526349.5
ENST00000527424.6
ENST00000534961.5
CDS-3UTR TCA 90 bp GAGTTTCACAGCTATATATTATCATATAGGTACCTGCTGAGAAGGATAAGATGGCAATCAAAGCGAAACTaGCCACAACTGCCACAAGTA +
Preference number: 4 (lower is better)
Translates to: EFHSYILSYRYLLRRIRWQSKRN*PQLPQV
Trigger: TACTTGTGGCAGTTGTGGTCAGTTTCGCTTTGATTG...CCATCTTATCCTTCTCAGCAGGTACCTATATGATAATATATAGCTGTGAAACTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000240159.8
ENST00000319073.5
ENST00000527424.6
ENST00000534961.5
CDS-3UTR TCA 90 bp GTTATAATCATTAATATCCTGATGCAATCTCAGAACATCCTGAGACTGATCATCGCATCCTGTTCTGTTTaGAGCTGTTCTCGAAGTACC +
Preference number: 4 (lower is better)
Translates to: VIIINILMQSQNILRLIIASCSV*SCSRST
Trigger: GGTACTTCGAGAACAGCTTCAAACAGAACAGGATGC...GATGATCAGTCTCAGGATGTTCTGAGATTGCATCAGGATATTAATGATTATAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240159.8
ENST00000319073.5
CDS-3UTR TCA 90 bp TATCTAAACATTCTATGCAGGAGTCCTACTAAGAAATTTTGGTGTAATGCCACTGCATCCTGTTCTGTTTaGAGCTGTTCTCGAAGTACC +
Preference number: 4 (lower is better)
Translates to: YLNILCRSPTKKFWCNATASCSV*SCSRST
Trigger: GGTACTTCGAGAACAGCTTCAAACAGAACAGGATGC...AGTGGCATTACACCAAAATTTCTTAGTAGGACTCCTGCATAGAATGTTTAGATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527424.6
ENST00000534961.5
CDS-3UTR TCA 90 bp TTCATTGCTTTATACTGCCATGGGTCCTTCTGTTTGATGTTCTACATTAGCTCACTGAAAACATTTCCCTaGATGCATGCCTCAGTAAAG +
Preference number: 4 (lower is better)
Translates to: FIALYCHGSFCLMFYISSLKTFP*MHASVK
Trigger: CTTTACTGAGGCATGCATTCAGGGAAATGTTTTCAG...TGAGCTAATGTAGAACATCAAACAGAAGGACCCATGGCAGTATAAAGCAATGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000240159.8
ENST00000319073.5
ENST00000526349.5
ENST00000527424.6
ENST00000534961.5
CDS-3UTR TCA 90 bp ATGAAAGGGAAGTTGGTGTCCTGCGTTCCTCACAAAATTATCCAAAGGATAAAAAGTACCATGTGGTACTaGGTCTTCTCAGATACATTC +
Preference number: 4 (lower is better)
Translates to: MKGKLVSCVPHKIIQRIKSTMWY*VFSDTF
Trigger: GAATGTATCTGAGAAGACTCAGTACCACATGGTACT...TTTTATCCTTTGGATAATTTTGTGAGGAACGCAGGACACCAACTTCCCTTTCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000527424.6
ENST00000534961.5
CDS-3UTR TCA 90 bp TACTGCCATGGGTCCTTCTGTTTGATGTTCTACATTAGCTCAGATATCCTAGTATATTGTTTTTCTCTATaGCAAGCAACAGCTCTGTCC +
Preference number: 4 (lower is better)
Translates to: YCHGSFCLMFYISSDILVYCFSL*QATALS
Trigger: GGACAGAGCTGTTGCTTGTCATAGAGAAAAACAATA...TACTAGGATATCTGAGCTAATGTAGAACATCAAACAGAAGGACCCATGGCAGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000527424.6
ENST00000534961.5
CDS-3UTR GCA 90 bp TTCATTGCTTTATACTGCCATGGGTCCTTCTGTTTGATGTTCTACATTAGCTCAATAATAGATCTGGGTTaGCCTGAGAATCTCCGGTTA +
Preference number: 4 (lower is better)
Translates to: FIALYCHGSFCLMFYISSIIDLG*PENLRL
Trigger: TAACCGGAGATTCTCAGGGCAACCCAGATCTATTAT...TGAGCTAATGTAGAACATCAAACAGAAGGACCCATGGCAGTATAAAGCAATGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000240159.8
ENST00000319073.5
ENST00000526349.5
ENST00000527424.6
ENST00000534961.5
CDS-3UTR GCA 90 bp GCTTTATACTGCCATGGGTCCTTCTGTTTGATGTTCTACATTAGCTCAGATATCTTCATTGCTTTATACTaGCATGGGTCCTTCTGTTTG +
Preference number: 4 (lower is better)
Translates to: ALYCHGSFCLMFYISSDIFIALY*HGSFCL
Trigger: CAAACAGAAGGACCCATGGCAGTATAAAGCAATGAA...GATATCTGAGCTAATGTAGAACATCAAACAGAAGGACCCATGGCAGTATAAAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000240159.8
ENST00000319073.5
ENST00000526349.5
ENST00000527424.6
ENST00000534961.5
CDS-3UTR GCA 90 bp TTCATTGCTTTATACTGCCATGGGTCCTTCTGTTTGATGTTCTACATTAGCTCAACTCCATTGCTTCATTaGTTTATACTGCCATGGGTC +
Preference number: 4 (lower is better)
Translates to: FIALYCHGSFCLMFYISSTPLLH*FILPWV
Trigger: GACCCATGGCAGTATAAAGCAATGAAGCAATGGAGT...TGAGCTAATGTAGAACATCAAACAGAAGGACCCATGGCAGTATAAAGCAATGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000240159.8
ENST00000319073.5
ENST00000526349.5
ENST00000527424.6
ENST00000534961.5
CDS-3UTR GCA 90 bp ATGAAAGGGAAGTTGGTGTCCTGCGTTCCTCACAAAATTATCCAAAGGATAAAACATCCCCTCACATCCTaGTGTCATACATTCACTAAT +
Preference number: 4 (lower is better)
Translates to: MKGKLVSCVPHKIIQRIKHPLTS*CHTFTN
Trigger: ATTAGTGAATGTATGACAGCAGGATGTGAGGGGATG...TTTTATCCTTTGGATAATTTTGTGAGGAACGCAGGACACCAACTTCCCTTTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000527424.6
ENST00000534961.5
CDS-3UTR GCA 90 bp TTCATTGCTTTATACTGCCATGGGTCCTTCTGTTTGATGTTCTACATTAGCTCACATCCCCTCACATCCTaGTGTCATACATTCACTAAT +
Preference number: 4 (lower is better)
Translates to: FIALYCHGSFCLMFYISSHPLTS*CHTFTN
Trigger: ATTAGTGAATGTATGACAGCAGGATGTGAGGGGATG...TGAGCTAATGTAGAACATCAAACAGAAGGACCCATGGCAGTATAAAGCAATGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527424.6
ENST00000534961.5
CDS-3UTR CCA 90 bp GCTTTATACTGCCATGGGTCCTTCTGTTTGATGTTCTACATTAGCTCAGATATCCATCTAGTTAGCCTTTaGGTTATCACTTCTCGATAC +
Preference number: 4 (lower is better)
Translates to: ALYCHGSFCLMFYISSDIHLVSL*VITSRY
Trigger: GTATCGAGAAGTGATAACCCAAAGGCTAACTAGATG...GATATCTGAGCTAATGTAGAACATCAAACAGAAGGACCCATGGCAGTATAAAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000240159.8
ENST00000319073.5
ENST00000526349.5
ENST00000527424.6
ENST00000534961.5
CDS-3UTR CCA 90 bp TACTGCCATGGGTCCTTCTGTTTGATGTTCTACATTAGCTCAGATATCCTAGTATGCTTTATACTGCCATaGGTCCTTCTGTTTGATGTT +
Preference number: 4 (lower is better)
Translates to: YCHGSFCLMFYISSDILVCFILP*VLLFDV
Trigger: AACATCAAACAGAAGGACCCATGGCAGTATAAAGCA...TACTAGGATATCTGAGCTAATGTAGAACATCAAACAGAAGGACCCATGGCAGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000240159.8
ENST00000319073.5
ENST00000526349.5
ENST00000527424.6
ENST00000534961.5
CDS-3UTR CCA 90 bp GAGTTTCACAGCTATATATTATCATATAGGTACCTGCTGAGAAGGATAAGATGGCCAGTACCTTCCTATTaGCTTGATGCTCAAAGACAC +
Preference number: 4 (lower is better)
Translates to: EFHSYILSYRYLLRRIRWPVPSY*LDAQRH
Trigger: GTGTCTTTGAGCATCAAGCCAATAGGAAGGTACTGG...CCATCTTATCCTTCTCAGCAGGTACCTATATGATAATATATAGCTGTGAAACTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527424.6
ENST00000534961.5
CDS-3UTR CCA 90 bp GCTTTATACTGCCATGGGTCCTTCTGTTTGATGTTCTACATTAGCTCAGATATCACATTTCTTGATATTTaGCCATTCCAGGTCTCTCCA +
Preference number: 4 (lower is better)
Translates to: ALYCHGSFCLMFYISSDITFLDI*PFQVSP
Trigger: TGGAGAGACCTGGAATGGCCAAATATCAAGAAATGT...GATATCTGAGCTAATGTAGAACATCAAACAGAAGGACCCATGGCAGTATAAAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526349.5
CDS-3UTR TCA 90 bp GCTTTATACTGCCATGGGTCCTTCTGTTTGATGTTCTACATTAGCTCAGATATCTGTGTGCTGCCATCCTaGGACAGTATTATAAAAATT +
Preference number: 4 (lower is better)
Translates to: ALYCHGSFCLMFYISSDICVLPS*DSIIKI
Trigger: AATTTTTATAATACTGTCTCAGGATGGCAGCACACA...GATATCTGAGCTAATGTAGAACATCAAACAGAAGGACCCATGGCAGTATAAAGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000527424.6
ENST00000534961.5
CDS-3UTR TCA 90 bp GAGTTTCACAGCTATATATTATCATATAGGTACCTGCTGAGAAGGATAAGATGGGAGAATTGTAGTAGTTaGAACCACTGTTCTAGTGGG +
Preference number: 4 (lower is better)
Translates to: EFHSYILSYRYLLRRIRWENCSS*NHCSSG
Trigger: CCCACTAGAACAGTGGTTTCAACTACTACAATTCTC...CCATCTTATCCTTCTCAGCAGGTACCTATATGATAATATATAGCTGTGAAACTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527424.6
ENST00000534961.5
CDS-3UTR TCA 90 bp TTCATTGCTTTATACTGCCATGGGTCCTTCTGTTTGATGTTCTACATTAGCTCATTTAATCACAAGGTTTaGACCAAACCACCAGTCTTC +
Preference number: 4 (lower is better)
Translates to: FIALYCHGSFCLMFYISSFNHKV*TKPPVF
Trigger: GAAGACTGGTGGTTTGGTTCAAACCTTGTGATTAAA...TGAGCTAATGTAGAACATCAAACAGAAGGACCCATGGCAGTATAAAGCAATGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527424.6
ENST00000534961.5
CDS-3UTR GCA 90 bp GCTTTATACTGCCATGGGTCCTTCTGTTTGATGTTCTACATTAGCTCAGATATCGTAATTGGTAGGAAATaGATTTCCAGTCTGGTACAT +
Preference number: 4 (lower is better)
Translates to: ALYCHGSFCLMFYISSDIVIGRK*ISSLVH
Trigger: ATGTACCAGACTGGAAATGCATTTCCTACCAATTAC...GATATCTGAGCTAATGTAGAACATCAAACAGAAGGACCCATGGCAGTATAAAGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527424.6
ENST00000534961.5
CDS-3UTR CCA 90 bp TGCTTGACAAACTCTTTAATCACAAGGTTTGAACCAAACCACCAGTCTTCTACATGCTTTATACTGCCATaGGTCCTTCTGTTTGATGTT +
Preference number: 4 (lower is better)
Translates to: CLTNSLITRFEPNHQSSTCFILP*VLLFDV
Trigger: AACATCAAACAGAAGGACCCATGGCAGTATAAAGCA...TGTAGAAGACTGGTGGTTTGGTTCAAACCTTGTGATTAAAGAGTTTGTCAAGCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527424.6
ENST00000534961.5
CDS-3UTR CCA 90 bp ATGAAAGGGAAGTTGGTGTCCTGCGTTCCTCACAAAATTATCCAAAGGATAAAATGCTTTATACTGCCATaGGTCCTTCTGTTTGATGTT +
Preference number: 4 (lower is better)
Translates to: MKGKLVSCVPHKIIQRIKCFILP*VLLFDV
Trigger: AACATCAAACAGAAGGACCCATGGCAGTATAAAGCA...TTTTATCCTTTGGATAATTTTGTGAGGAACGCAGGACACCAACTTCCCTTTCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000527424.6
ENST00000534961.5
3UTR CAA 72 bp TGCTTCATTGCTTTATACTGCCATGGGTCCTTCTGTTaGATGTTCTACATTAGCTCAGATATCCTAGTAAAC +
Preference number: 4 (lower is better)
Translates to: CFIALYCHGSFC*MFYISSDILVN
Trigger: GTTTACTAGGATATCTGAGCTAATGTAGAACATCAAACAGAAGGACCCATGGCAGTATAAAGCAATGAAGCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000240159.8
ENST00000319073.5
ENST00000526349.5
ENST00000527424.6
ENST00000534961.5
CDS-3UTR TCA 90 bp ATGAAAGGGAAGTTGGTGTCCTGCGTTCCTCACAAAATTATCCAAAGGATAAAAGGTGTAATGCCACTTTaGTCAGTTATTTGTTGTATG +
Preference number: 4 (lower is better)
Translates to: MKGKLVSCVPHKIIQRIKGVMPL*SVICCM
Trigger: CATACAACAAATAACTGATCAAAGTGGCATTACACC...TTTTATCCTTTGGATAATTTTGTGAGGAACGCAGGACACCAACTTCCCTTTCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000527424.6
ENST00000534961.5
CDS-3UTR GCA 90 bp TACTGCCATGGGTCCTTCTGTTTGATGTTCTACATTAGCTCAGATATCCTAGTATACATTTCTGAAAAGTaGATATACCAGGGTAGCAAT +
Preference number: 4 (lower is better)
Translates to: YCHGSFCLMFYISSDILVYISEK*IYQGSN
Trigger: ATTGCTACCCTGGTATATGCACTTTTCAGAAATGTA...TACTAGGATATCTGAGCTAATGTAGAACATCAAACAGAAGGACCCATGGCAGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000240159.8
ENST00000319073.5
ENST00000527424.6
ENST00000534961.5
CDS-3UTR GCA 90 bp GAGTTTCACAGCTATATATTATCATATAGGTACCTGCTGAGAAGGATAAGATGGTTCATTGCTTTATACTaGCATGGGTCCTTCTGTTTG +
Preference number: 4 (lower is better)
Translates to: EFHSYILSYRYLLRRIRWFIALY*HGSFCL
Trigger: CAAACAGAAGGACCCATGGCAGTATAAAGCAATGAA...CCATCTTATCCTTCTCAGCAGGTACCTATATGATAATATATAGCTGTGAAACTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000240159.8
ENST00000319073.5
ENST00000526349.5
ENST00000527424.6
ENST00000534961.5
CDS-3UTR GCA 90 bp GTTATAATCATTAATATCCTGATGCAATCTCAGAACATCCTGAGACTGATCATCACTCCATTGCTTCATTaGTTTATACTGCCATGGGTC +
Preference number: 4 (lower is better)
Translates to: VIIINILMQSQNILRLIITPLLH*FILPWV
Trigger: GACCCATGGCAGTATAAAGCAATGAAGCAATGGAGT...GATGATCAGTCTCAGGATGTTCTGAGATTGCATCAGGATATTAATGATTATAAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240159.8
ENST00000319073.5
CDS-3UTR GCA 90 bp TATCTAAACATTCTATGCAGGAGTCCTACTAAGAAATTTTGGTGTAATGCCACTACTCCATTGCTTCATTaGTTTATACTGCCATGGGTC +
Preference number: 4 (lower is better)
Translates to: YLNILCRSPTKKFWCNATTPLLH*FILPWV
Trigger: GACCCATGGCAGTATAAAGCAATGAAGCAATGGAGT...AGTGGCATTACACCAAAATTTCTTAGTAGGACTCCTGCATAGAATGTTTAGATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527424.6
ENST00000534961.5
CDS-3UTR GCA 90 bp TTCATTGCTTTATACTGCCATGGGTCCTTCTGTTTGATGTTCTACATTAGCTCAATGAAAAGGCAGAACTaGTCCAAATGCACAAAACTT +
Preference number: 4 (lower is better)
Translates to: FIALYCHGSFCLMFYISSMKRQN*SKCTKL
Trigger: AAGTTTTGTGCATTTGGAGCAGTTCTGCCTTTTCAT...TGAGCTAATGTAGAACATCAAACAGAAGGACCCATGGCAGTATAAAGCAATGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000240159.8
ENST00000527424.6
ENST00000534961.5
CDS-3UTR GCA 90 bp TTCATTGCTTTATACTGCCATGGGTCCTTCTGTTTGATGTTCTACATTAGCTCATTGGAGCAGAATGCATaGACACAAAATAAAATCCTG +
Preference number: 4 (lower is better)
Translates to: FIALYCHGSFCLMFYISSLEQNA*TQNKIL
Trigger: CAGGATTTTATTTTGTGTGCATGCATTCTGCTCCAA...TGAGCTAATGTAGAACATCAAACAGAAGGACCCATGGCAGTATAAAGCAATGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000527424.6
ENST00000534961.5
CDS-3UTR GCA 90 bp TATCTAAACATTCTATGCAGGAGTCCTACTAAGAAATTTTGGTGTAATGCCACTCTCTCAGATCCCTTCTaGATTTATCATCAGAGATCG +
Preference number: 4 (lower is better)
Translates to: YLNILCRSPTKKFWCNATLSDPF*IYHQRS
Trigger: CGATCTCTGATGATAAATGCAGAAGGGATCTGAGAG...AGTGGCATTACACCAAAATTTCTTAGTAGGACTCCTGCATAGAATGTTTAGATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527424.6
ENST00000534961.5
CDS-3UTR CCA 90 bp GTTATAATCATTAATATCCTGATGCAATCTCAGAACATCCTGAGACTGATCATCACTGCCACAAGTACTTaGTCGCTTACTCCTTCTATA +
Preference number: 4 (lower is better)
Translates to: VIIINILMQSQNILRLIITATST*SLTPSI
Trigger: TATAGAAGGAGTAAGCGACCAAGTACTTGTGGCAGT...GATGATCAGTCTCAGGATGTTCTGAGATTGCATCAGGATATTAATGATTATAAC
38% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240159.8
ENST00000319073.5
CDS-3UTR CCA 90 bp TTTATTAGCATTACCATGGATATTGAGACTGCTGGGAATATCTCTGAGGTCCTCACATCTGTGAATATCTaGGTGGACAAAACTAACATT +
Preference number: 4 (lower is better)
Translates to: FISITMDIETAGNISEVLTSVNI*VDKTNI
Trigger: AATGTTAGTTTTGTCCACCCAGATATTCACAGATGT...GAGGACCTCAGAGATATTCCCAGCAGTCTCAATATCCATGGTAATGCTAATAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319104.7
CDS-3UTR TCA 90 bp GAGTTTCACAGCTATATATTATCATATAGGTACCTGCTGAGAAGGATAAGATGGTTTGATGTACATTTCTaGAAAGTGCATATACCAGGG +
Preference number: 4 (lower is better)
Translates to: EFHSYILSYRYLLRRIRWFDVHF*KVHIPG
Trigger: CCCTGGTATATGCACTTTTCAGAAATGTACATCAAA...CCATCTTATCCTTCTCAGCAGGTACCTATATGATAATATATAGCTGTGAAACTC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000240159.8
ENST00000319073.5
ENST00000527424.6
ENST00000534961.5
CDS-3UTR TCA 90 bp TTTCATAGAGCTTGTGTTCTAGTGAGAAGCAGACAGACAATGGAAATGTCAATATTTGATGTACATTTCTaGAAAGTGCATATACCAGGG +
Preference number: 4 (lower is better)
Translates to: FHRACVLVRSRQTMEMSIFDVHF*KVHIPG
Trigger: CCCTGGTATATGCACTTTTCAGAAATGTACATCAAA...TATTGACATTTCCATTGTCTGTCTGCTTCTCACTAGAACACAAGCTCTATGAAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319104.7
CDS-3UTR TCA 90 bp GAGTTTCACAGCTATATATTATCATATAGGTACCTGCTGAGAAGGATAAGATGGTTGATGTACATTTCTTaGTATTTGGCCATTCCAGGT +
Preference number: 4 (lower is better)
Translates to: EFHSYILSYRYLLRRIRWLMYIS*YLAIPG
Trigger: ACCTGGAATGGCCAAATATCAAGAAATGTACATCAA...CCATCTTATCCTTCTCAGCAGGTACCTATATGATAATATATAGCTGTGAAACTC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526349.5
CDS-3UTR GCA 90 bp TTCATTGCTTTATACTGCCATGGGTCCTTCTGTTTGATGTTCTACATTAGCTCATACATTTCTGAAAAGTaGATATACCAGGGTAGCAAT +
Preference number: 4 (lower is better)
Translates to: FIALYCHGSFCLMFYISSYISEK*IYQGSN
Trigger: ATTGCTACCCTGGTATATGCACTTTTCAGAAATGTA...TGAGCTAATGTAGAACATCAAACAGAAGGACCCATGGCAGTATAAAGCAATGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000240159.8
ENST00000319073.5
ENST00000527424.6
ENST00000534961.5
CDS-3UTR GCA 90 bp GTTATAATCATTAATATCCTGATGCAATCTCAGAACATCCTGAGACTGATCATCTTCATTGCTTTATACTaGCATGGGTCCTTCTGTTTG +
Preference number: 4 (lower is better)
Translates to: VIIINILMQSQNILRLIIFIALY*HGSFCL
Trigger: CAAACAGAAGGACCCATGGCAGTATAAAGCAATGAA...GATGATCAGTCTCAGGATGTTCTGAGATTGCATCAGGATATTAATGATTATAAC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240159.8
ENST00000319073.5
CDS-3UTR GCA 90 bp TGCTTGACAAACTCTTTAATCACAAGGTTTGAACCAAACCACCAGTCTTCTACATTTTTCTGTGATGTATaGCACCCTTTTACCTATTTG +
Preference number: 4 (lower is better)
Translates to: CLTNSLITRFEPNHQSSTFFCDV*HPFTYL
Trigger: CAAATAGGTAAAAGGGTGGCATACATCACAGAAAAA...TGTAGAAGACTGGTGGTTTGGTTCAAACCTTGTGATTAAAGAGTTTGTCAAGCA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000527424.6
ENST00000534961.5
CDS-3UTR GCA 90 bp TATCTAAACATTCTATGCAGGAGTCCTACTAAGAAATTTTGGTGTAATGCCACTGTAATTGGTAGGAAATaGATTTCCAGTCTGGTACAT +
Preference number: 4 (lower is better)
Translates to: YLNILCRSPTKKFWCNATVIGRK*ISSLVH
Trigger: ATGTACCAGACTGGAAATGCATTTCCTACCAATTAC...AGTGGCATTACACCAAAATTTCTTAGTAGGACTCCTGCATAGAATGTTTAGATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527424.6
ENST00000534961.5
CDS-3UTR GCA 90 bp GTTATAATCATTAATATCCTGATGCAATCTCAGAACATCCTGAGACTGATCATCTACATTTCTGAAAAGTaGATATACCAGGGTAGCAAT +
Preference number: 4 (lower is better)
Translates to: VIIINILMQSQNILRLIIYISEK*IYQGSN
Trigger: ATTGCTACCCTGGTATATGCACTTTTCAGAAATGTA...GATGATCAGTCTCAGGATGTTCTGAGATTGCATCAGGATATTAATGATTATAAC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240159.8
ENST00000319073.5
CDS-3UTR GCA 90 bp TATCTAAACATTCTATGCAGGAGTCCTACTAAGAAATTTTGGTGTAATGCCACTTACATTTCTGAAAAGTaGATATACCAGGGTAGCAAT +
Preference number: 4 (lower is better)
Translates to: YLNILCRSPTKKFWCNATYISEK*IYQGSN
Trigger: ATTGCTACCCTGGTATATGCACTTTTCAGAAATGTA...AGTGGCATTACACCAAAATTTCTTAGTAGGACTCCTGCATAGAATGTTTAGATA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000527424.6
ENST00000534961.5
CDS GCA 90 bp CCCGGGCAACCCACTAGACGTCCCCTTTCTAATTTGGAGTGCGGGTaGGGGCGCACGCGCACTGCCGAGCTTCCGCGAGGGCGCGACCGG +
Preference number: 5 (lower is better)
Translates to: PGQPTRRPLSNLECG*GRTRTAELPRGRDR
Trigger: CCGGTCGCGCCCTCGCGGAAGCTCGGCAGTGCGCGTGCGCCCGCACCCGCACTCCAAATTAGAAAGGGGACGTCTAGTGGGTTGCCCGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000240159.8
ENST00000526349.5
ENST00000528318.5
ENST00000534961.5
CDS CCA 90 bp CCGCCACCCCTCCCGGGCAACCCACTAGACGTCCCCTTTCTAATTTaGAGTGCGGGTGCGGGCGCACGCGCACTGCCGAGCTTCCGCGAG +
Preference number: 5 (lower is better)
Translates to: PPPLPGNPLDVPFLI*SAGAGARALPSFRE
Trigger: CTCGCGGAAGCTCGGCAGTGCGCGTGCGCCCGCACCCGCACTCCAAATTAGAAAGGGGACGTCTAGTGGGTTGCCCGGGAGGGGTGGCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000240159.8
ENST00000526349.5
ENST00000528318.5
ENST00000534961.5
CDS GCA 90 bp CCTGCATCCGACTGTACAGGCAGGAGAGTTCTGTGTGTCCAGGCATaGAACAGCCTCTTGATGGGTCTGCTCACTTGCACGGCTGCTCTT +
Preference number: 5 (lower is better)
Translates to: PASDCTGRRVLCVQA*NSLLMGLLTCTAAL
Trigger: AAGAGCAGCCGTGCAAGTGAGCAGACCCATCAAGAGGCTGTTGCATGCCTGGACACACAGAACTCTCCTGCCTGTACAGTCGGATGCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319104.7
CDS GCA 90 bp CTGAAGGGAGCATTCGGTCATGGGGTATATGCTGAGGCCCTGACCTaGATCCGACTGTACAGGCAGGAGAGTTCTGTGTGTCCAGGCATG +
Preference number: 5 (lower is better)
Translates to: LKGAFGHGVYAEALT*IRLYRQESSVCPGM
Trigger: CATGCCTGGACACACAGAACTCTCCTGCCTGTACAGTCGGATGCAGGTCAGGGCCTCAGCATATACCCCATGACCGAATGCTCCCTTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319104.7
CDS TCA 90 bp GTACAGGCAGGAGAGTTCTGTGTGTCCAGGCATGCAACAGCCTCTTaGTGGGTCTGCTCACTTGCACGGCTGCTCTTCTCTGATGAACCC +
Preference number: 5 (lower is better)
Translates to: VQAGEFCVSRHATAS*WVCSLARLLFSDEP
Trigger: GGGTTCATCAGAGAAGAGCAGCCGTGCAAGTGAGCAGACCCATCAAGAGGCTGTTGCATGCCTGGACACACAGAACTCTCCTGCCTGTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319104.7
CDS-3UTR CAA 90 bp AGGCCCCCGACTGAAAACATTTCCCTGAATGCATGCCTCAGTAAAGTGGGTAGACGTCCCCTTTCTAATTaGGAGTGCGGGTGCGGGCGC +
Preference number: 5 (lower is better)
Translates to: RPPTENISLNACLSKVGRRPLSN*ECGCGR
Trigger: GCGCCCGCACCCGCACTCCAAATTAGAAAGGGGACG...TCTACCCACTTTACTGAGGCATGCATTCAGGGAAATGTTTTCAGTCGGGGGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000240159.8
CDS-3UTR CAA 90 bp AGGCTGGAGTGCAGTGGCGCAATCCACCTCCTGGGTTTACGCCATTCTTCTGCCTGCATCCTGTTCTGTTaGAAGCTGTTCTCGAAGTAC +
Preference number: 5 (lower is better)
Translates to: RLECSGAIHLLGLRHSSACILFC*KLFSKY
Trigger: GTACTTCGAGAACAGCTTCAAACAGAACAGGATGCA...GGCAGAAGAATGGCGTAAACCCAGGAGGTGGATTGCGCCACTGCACTCCAGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000240159.8
ENST00000527424.6
ENST00000534961.5
CDS-3UTR CAA 90 bp ACTCTGTGGGAAAGGGAGAGCAGGCTTTCCAGCAGAGTCACACTTGAGATGATCAAAAGATGTCCACAGTaGGTCTCCACCGGGAAGGAG +
Preference number: 5 (lower is better)
Translates to: TLWERESRLSSRVTLEMIKRCPQ*VSTGKE
Trigger: CTCCTTCCCGGTGGAGACCAACTGTGGACATCTTTT...GATCATCTCAAGTGTGACTCTGCTGGAAAGCCTGCTCTCCCTTTCCCACAGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319104.7
CDS-3UTR CAA 90 bp TACTGCCATGGGTCCTTCTGTTTGATGTTCTACATTAGCTCAGATATCCTAGTACGTCCCCTTTCTAATTaGGAGTGCGGGTGCGGGCGC +
Preference number: 5 (lower is better)
Translates to: YCHGSFCLMFYISSDILVRPLSN*ECGCGR
Trigger: GCGCCCGCACCCGCACTCCAAATTAGAAAGGGGACG...TACTAGGATATCTGAGCTAATGTAGAACATCAAACAGAAGGACCCATGGCAGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000240159.8
ENST00000526349.5
ENST00000534961.5
CDS-3UTR CAA 90 bp AAATGTCAATATGATGATGCTGTGCTGAGATGTCTGAATGCCTCAGAGTGCCCTGATGGGTCTGCTCACTaGCACGGCTGCTCTTCTCTG +
Preference number: 5 (lower is better)
Translates to: KCQYDDAVLRCLNASECPDGSAH*HGCSSL
Trigger: CAGAGAAGAGCAGCCGTGCAAGTGAGCAGACCCATC...AGGGCACTCTGAGGCATTCAGACATCTCAGCACAGCATCATCATATTGACATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319104.7
CDS-3UTR CAA 90 bp TCAGTGAAGGAGATTTCTGCCCTCAGGGAGCTAATGTTCTCAAAGACATTAGGGGCATGCAACAGCCTCTaGATGGGTCTGCTCACTTGC +
Preference number: 5 (lower is better)
Translates to: SVKEISALRELMFSKTLGACNSL*MGLLTC
Trigger: GCAAGTGAGCAGACCCATCAAGAGGCTGTTGCATGC...CCCTAATGTCTTTGAGAACATTAGCTCCCTGAGGGCAGAAATCTCCTTCACTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319104.7
CDS-3UTR CAA 90 bp ATGCTAACACTGACTCCTGGGCATCCCCTCACATCCTGCTGTCATACATTCACTGGGCAGTTAGAACAGTaGTTTTCCCCGTCTTGTTCC +
Preference number: 5 (lower is better)
Translates to: MLTLTPGHPLTSCCHTFTGQLEQ*FSPSCS
Trigger: GGAACAAGACGGGGAAAACAACTGTTCTAACTGCCC...AGTGAATGTATGACAGCAGGATGTGAGGGGATGCCCAGGAGTCAGTGTTAGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000527424.6
ENST00000534961.5
CDS-3UTR CAA 90 bp ATGAAAGGGAAGTTGGTGTCCTGCGTTCCTCACAAAATTATCCAAAGGATAAAACGTCCCCTTTCTAATTaGGAGTGCGGGTGCGGGCGC +
Preference number: 5 (lower is better)
Translates to: MKGKLVSCVPHKIIQRIKRPLSN*ECGCGR
Trigger: GCGCCCGCACCCGCACTCCAAATTAGAAAGGGGACG...TTTTATCCTTTGGATAATTTTGTGAGGAACGCAGGACACCAACTTCCCTTTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000534961.5
CDS-3UTR CAA 90 bp CCCCACAGAGCTGCCCAAGTTATTATCTGCTCCTGGGGTTGGACCATCTGTTTTAACTGCCACAAGTACTaGGTCGCTTACTCCTTCTAT +
Preference number: 5 (lower is better)
Translates to: PHRAAQVIICSWGWTICFNCHKY*VAYSFY
Trigger: ATAGAAGGAGTAAGCGACCAAGTACTTGTGGCAGTT...AAAACAGATGGTCCAACCCCAGGAGCAGATAATAACTTGGGCAGCTCTGTGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000527424.6
ENST00000534961.5
CDS-3UTR CAA 90 bp AGTGTAGAATTCGGATTCATGTCATCTCCACAGACCTTTCCTCTTAGGAGTGCCAAAAGATGTCCACAGTaGGTCTCCACCGGGAAGGAG +
Preference number: 5 (lower is better)
Translates to: SVEFGFMSSPQTFPLRSAKRCPQ*VSTGKE
Trigger: CTCCTTCCCGGTGGAGACCAACTGTGGACATCTTTT...GGCACTCCTAAGAGGAAAGGTCTGTGGAGATGACATGAATCCGAATTCTACACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527424.6
ENST00000534961.5
CDS-3UTR CAA 90 bp CCCCACAGAGCTGCCCAAGTTATTATCTGCTCCTGGGGTTGGACCATCTGTTTTCATGGGTCCTTCTGTTaGATGTTCTACATTAGCTCA +
Preference number: 5 (lower is better)
Translates to: PHRAAQVIICSWGWTICFHGSFC*MFYISS
Trigger: TGAGCTAATGTAGAACATCAAACAGAAGGACCCATG...AAAACAGATGGTCCAACCCCAGGAGCAGATAATAACTTGGGCAGCTCTGTGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000527424.6
ENST00000534961.5
CDS-3UTR CAA 90 bp GCTTTATACTGCCATGGGTCCTTCTGTTTGATGTTCTACATTAGCTCAGATATCCAGGCTACTCTGTGTTaGCAGCATCGCCCAGGTTCC +
Preference number: 5 (lower is better)
Translates to: ALYCHGSFCLMFYISSDIQATLC*QHRPGS
Trigger: GGAACCTGGGCGATGCTGCAAACACAGAGTAGCCTG...GATATCTGAGCTAATGTAGAACATCAAACAGAAGGACCCATGGCAGTATAAAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527424.6
ENST00000534961.5
CDS-3UTR CAA 90 bp CGTTCCCAGTACCTTCCTATTGGCTTGATGCTCAAAGACACGAAGATTCACCTTTCTATGAAAGGGAAGTaGGTGTCCTGCGTTCCTCAC +
Preference number: 5 (lower is better)
Translates to: RSQYLPIGLMLKDTKIHLSMKGK*VSCVPH
Trigger: GTGAGGAACGCAGGACACCAACTTCCCTTTCATAGA...AAGGTGAATCTTCGTGTCTTTGAGCATCAAGCCAATAGGAAGGTACTGGGAACG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527424.6
ENST00000534961.5
CDS-3UTR CAA 90 bp GTACATGGCAGTGTGACAAACTCCTACTCACTCGCTTTTCAAGTTGGTGACTGCTACCTTCCTATTGGCTaGATGCTCAAAGACACGAAG +
Preference number: 5 (lower is better)
Translates to: VHGSVTNSYSLAFQVGDCYLPIG*MLKDTK
Trigger: CTTCGTGTCTTTGAGCATCAAGCCAATAGGAAGGTA...GCAGTCACCAACTTGAAAAGCGAGTGAGTAGGAGTTTGTCACACTGCCATGTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527424.6
ENST00000534961.5
CDS-3UTR CAA 90 bp CGTTCCCAGTACCTTCCTATTGGCTTGATGCTCAAAGACACGAAGATTCACCTTCACTCGCTTTTCAAGTaGGTGACTGCAGCTGAAATG +
Preference number: 5 (lower is better)
Translates to: RSQYLPIGLMLKDTKIHLHSLFK*VTAAEM
Trigger: CATTTCAGCTGCAGTCACCAACTTGAAAAGCGAGTG...AAGGTGAATCTTCGTGTCTTTGAGCATCAAGCCAATAGGAAGGTACTGGGAACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527424.6
ENST00000534961.5
CDS-3UTR CAA 90 bp AGTGTAGAATTCGGATTCATGTCATCTCCACAGACCTTTCCTCTTAGGAGTGCCCACTCGCTTTTCAAGTaGGTGACTGCAGCTGAAATG +
Preference number: 5 (lower is better)
Translates to: SVEFGFMSSPQTFPLRSAHSLFK*VTAAEM
Trigger: CATTTCAGCTGCAGTCACCAACTTGAAAAGCGAGTG...GGCACTCCTAAGAGGAAAGGTCTGTGGAGATGACATGAATCCGAATTCTACACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527424.6
ENST00000534961.5
CDS-3UTR CAA 90 bp AGTCTGGTACATGGCAGTGTGACAAACTCCTACTCACTCGCTTTTCAAGTTGGTAACTGCCACAAGTACTaGGTCGCTTACTCCTTCTAT +
Preference number: 5 (lower is better)
Translates to: SLVHGSVTNSYSLAFQVGNCHKY*VAYSFY
Trigger: ATAGAAGGAGTAAGCGACCAAGTACTTGTGGCAGTT...ACCAACTTGAAAAGCGAGTGAGTAGGAGTTTGTCACACTGCCATGTACCAGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527424.6
ENST00000534961.5
CDS-3UTR CAA 90 bp TCAGTGAAGGAGATTTCTGCCCTCAGGGAGCTAATGTTCTCAAAGACATTAGGGTGCATCCTGTTCTGTTaGAAGCTGTTCTCGAAGTAC +
Preference number: 5 (lower is better)
Translates to: SVKEISALRELMFSKTLGCILFC*KLFSKY
Trigger: GTACTTCGAGAACAGCTTCAAACAGAACAGGATGCA...CCCTAATGTCTTTGAGAACATTAGCTCCCTGAGGGCAGAAATCTCCTTCACTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319104.7
CDS-3UTR CAA 90 bp AGTCTGGTACATGGCAGTGTGACAAACTCCTACTCACTCGCTTTTCAAGTTGGTTGCATCCTGTTCTGTTaGAAGCTGTTCTCGAAGTAC +
Preference number: 5 (lower is better)
Translates to: SLVHGSVTNSYSLAFQVGCILFC*KLFSKY
Trigger: GTACTTCGAGAACAGCTTCAAACAGAACAGGATGCA...ACCAACTTGAAAAGCGAGTGAGTAGGAGTTTGTCACACTGCCATGTACCAGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527424.6
ENST00000534961.5
CDS-3UTR CAA 90 bp GCTTTATACTGCCATGGGTCCTTCTGTTTGATGTTCTACATTAGCTCAGATATCAAAAGATGTCCACAGTaGGTCTCCACCGGGAAGGAG +
Preference number: 5 (lower is better)
Translates to: ALYCHGSFCLMFYISSDIKRCPQ*VSTGKE
Trigger: CTCCTTCCCGGTGGAGACCAACTGTGGACATCTTTT...GATATCTGAGCTAATGTAGAACATCAAACAGAAGGACCCATGGCAGTATAAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000240159.8
ENST00000319073.5
ENST00000526349.5
ENST00000527424.6
ENST00000534961.5
CDS-3UTR CAA 90 bp GAGTTTCACAGCTATATATTATCATATAGGTACCTGCTGAGAAGGATAAGATGGCAGGCTACTCTGTGTTaGCAGCATCGCCCAGGTTCC +
Preference number: 5 (lower is better)
Translates to: EFHSYILSYRYLLRRIRWQATLC*QHRPGS
Trigger: GGAACCTGGGCGATGCTGCAAACACAGAGTAGCCTG...CCATCTTATCCTTCTCAGCAGGTACCTATATGATAATATATAGCTGTGAAACTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527424.6
ENST00000534961.5
CDS-3UTR CAA 90 bp GTACATGGCAGTGTGACAAACTCCTACTCACTCGCTTTTCAAGTTGGTGACTGCCGAAAGGATGAGCTCTaGTTTAAATGTCTAACTGTG +
Preference number: 5 (lower is better)
Translates to: VHGSVTNSYSLAFQVGDCRKDEL*FKCLTV
Trigger: CACAGTTAGACATTTAAACAAGAGCTCATCCTTTCG...GCAGTCACCAACTTGAAAAGCGAGTGAGTAGGAGTTTGTCACACTGCCATGTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527424.6
ENST00000534961.5
CDS-3UTR CAA 90 bp AGTGTAGAATTCGGATTCATGTCATCTCCACAGACCTTTCCTCTTAGGAGTGCCGAACCAGTTTCTCTCTaGCTGTTCCTCTTAACAACT +
Preference number: 5 (lower is better)
Translates to: SVEFGFMSSPQTFPLRSAEPVSL*LFLLTT
Trigger: AGTTGTTAAGAGGAACAGCAAGAGAGAAACTGGTTC...GGCACTCCTAAGAGGAAAGGTCTGTGGAGATGACATGAATCCGAATTCTACACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527424.6
ENST00000534961.5
CDS-3UTR CAA 90 bp AACATTTCCCTGAATGCATGCCTCAGTAAAGTGGGTAGATCCATAATTCTCTCCAACTGCCACAAGTACTaGGTCGCTTACTCCTTCTAT +
Preference number: 5 (lower is better)
Translates to: NISLNACLSKVGRSIILSNCHKY*VAYSFY
Trigger: ATAGAAGGAGTAAGCGACCAAGTACTTGTGGCAGTT...GGAGAGAATTATGGATCTACCCACTTTACTGAGGCATGCATTCAGGGAAATGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240159.8
ENST00000319073.5
CDS-3UTR CAA 90 bp GAGTTTCACAGCTATATATTATCATATAGGTACCTGCTGAGAAGGATAAGATGGAAAAGATGTCCACAGTaGGTCTCCACCGGGAAGGAG +
Preference number: 5 (lower is better)
Translates to: EFHSYILSYRYLLRRIRWKRCPQ*VSTGKE
Trigger: CTCCTTCCCGGTGGAGACCAACTGTGGACATCTTTT...CCATCTTATCCTTCTCAGCAGGTACCTATATGATAATATATAGCTGTGAAACTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000240159.8
ENST00000319073.5
ENST00000526349.5
ENST00000527424.6
ENST00000534961.5
CDS-3UTR CAA 90 bp GCTTTATACTGCCATGGGTCCTTCTGTTTGATGTTCTACATTAGCTCAGATATCTATCTGCTCCTGGGGTaGGACCATCTGTTTTATGAC +
Preference number: 5 (lower is better)
Translates to: ALYCHGSFCLMFYISSDIYLLLG*DHLFYD
Trigger: GTCATAAAACAGATGGTCCAACCCCAGGAGCAGATA...GATATCTGAGCTAATGTAGAACATCAAACAGAAGGACCCATGGCAGTATAAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000527424.6
ENST00000534961.5
CDS-3UTR CAA 90 bp ATGAAAGGGAAGTTGGTGTCCTGCGTTCCTCACAAAATTATCCAAAGGATAAAAGGGCAGTTAGAACAGTaGTTTTCCCCGTCTTGTTCC +
Preference number: 5 (lower is better)
Translates to: MKGKLVSCVPHKIIQRIKGQLEQ*FSPSCS
Trigger: GGAACAAGACGGGGAAAACAACTGTTCTAACTGCCC...TTTTATCCTTTGGATAATTTTGTGAGGAACGCAGGACACCAACTTCCCTTTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000527424.6
ENST00000534961.5
CDS CCA 90 bp AGGGTAGCAATCAAAGCGAAACTGACCACAACTGCCACAAGTACTTaGTCGCTTACTCCTTCTATAACTGAATCATCATCCAGTTTCAAA +
Preference number: 5 (lower is better)
Translates to: RVAIKAKLTTTATST*SLTPSITESSSSFK
Trigger: TTTGAAACTGGATGATGATTCAGTTATAGAAGGAGTAAGCGACCAAGTACTTGTGGCAGTTGTGGTCAGTTTCGCTTTGATTGCTACCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000240159.8
ENST00000319073.5
ENST00000319104.7
ENST00000524954.1
ENST00000527424.6
ENST00000528318.5
ENST00000531440.5
ENST00000534961.5
CDS-3UTR CAA 90 bp TTTATTAGCATTACCATGGATATTGAGACTGCTGGGAATATCTCTGAGGTCCTCAACTGCCACAAGTACTaGGTCGCTTACTCCTTCTAT +
Preference number: 5 (lower is better)
Translates to: FISITMDIETAGNISEVLNCHKY*VAYSFY
Trigger: ATAGAAGGAGTAAGCGACCAAGTACTTGTGGCAGTT...GAGGACCTCAGAGATATTCCCAGCAGTCTCAATATCCATGGTAATGCTAATAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319104.7
CDS-3UTR CAA 90 bp GTTATAATCATTAATATCCTGATGCAATCTCAGAACATCCTGAGACTGATCATCAAAAGATGTCCACAGTaGGTCTCCACCGGGAAGGAG +
Preference number: 5 (lower is better)
Translates to: VIIINILMQSQNILRLIIKRCPQ*VSTGKE
Trigger: CTCCTTCCCGGTGGAGACCAACTGTGGACATCTTTT...GATGATCAGTCTCAGGATGTTCTGAGATTGCATCAGGATATTAATGATTATAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000240159.8
ENST00000319073.5
CDS-3UTR CAA 90 bp TTTCATAGAGCTTGTGTTCTAGTGAGAAGCAGACAGACAATGGAAATGTCAATAGGTCACTGCCTACTTTaGCACTACTTTTGCACTGCC +
Preference number: 5 (lower is better)
Translates to: FHRACVLVRSRQTMEMSIGHCLL*HYFCTA
Trigger: GGCAGTGCAAAAGTAGTGCAAAAGTAGGCAGTGACC...TATTGACATTTCCATTGTCTGTCTGCTTCTCACTAGAACACAAGCTCTATGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319104.7
CDS-3UTR CAA 90 bp GCCCAAGTTATTATCTGCTCCTGGGGTTGGACCATCTGTTTTATGACAGTTATGGATACATTCACTTGTTaGGCTCAAGACATGAATCTG +
Preference number: 5 (lower is better)
Translates to: AQVIICSWGWTICFMTVMDTFTC*AQDMNL
Trigger: CAGATTCATGTCTTGAGCCAAACAAGTGAATGTATC...CATAACTGTCATAAAACAGATGGTCCAACCCCAGGAGCAGATAATAACTTGGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000527424.6
ENST00000534961.5
CDS-3UTR CAA 90 bp GAGTTTCACAGCTATATATTATCATATAGGTACCTGCTGAGAAGGATAAGATGGTCTATGAAAGGGAAGTaGGTGTCCTGCGTTCCTCAC +
Preference number: 5 (lower is better)
Translates to: EFHSYILSYRYLLRRIRWSMKGK*VSCVPH
Trigger: GTGAGGAACGCAGGACACCAACTTCCCTTTCATAGA...CCATCTTATCCTTCTCAGCAGGTACCTATATGATAATATATAGCTGTGAAACTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527424.6
ENST00000534961.5
CDS-3UTR CAA 90 bp TGCTTGACAAACTCTTTAATCACAAGGTTTGAACCAAACCACCAGTCTTCTACATATCTGCTCCTGGGGTaGGACCATCTGTTTTATGAC +
Preference number: 5 (lower is better)
Translates to: CLTNSLITRFEPNHQSSTYLLLG*DHLFYD
Trigger: GTCATAAAACAGATGGTCCAACCCCAGGAGCAGATA...TGTAGAAGACTGGTGGTTTGGTTCAAACCTTGTGATTAAAGAGTTTGTCAAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000527424.6
ENST00000534961.5
CDS-3UTR CAA 90 bp TACTGCCATGGGTCCTTCTGTTTGATGTTCTACATTAGCTCAGATATCCTAGTAACTTTGAACTTCACCTaGATATTTGGCCATTCCAGG +
Preference number: 5 (lower is better)
Translates to: YCHGSFCLMFYISSDILVTLNFT*IFGHSR
Trigger: CCTGGAATGGCCAAATATCAAGGTGAAGTTCAAAGT...TACTAGGATATCTGAGCTAATGTAGAACATCAAACAGAAGGACCCATGGCAGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000240159.8
ENST00000319073.5
ENST00000527424.6
ENST00000534961.5
CDS-3UTR CAA 90 bp TACTGCCATGGGTCCTTCTGTTTGATGTTCTACATTAGCTCAGATATCCTAGTACATGGGTCCTTCTGTTaGATGTTCTACATTAGCTCA +
Preference number: 5 (lower is better)
Translates to: YCHGSFCLMFYISSDILVHGSFC*MFYISS
Trigger: TGAGCTAATGTAGAACATCAAACAGAAGGACCCATG...TACTAGGATATCTGAGCTAATGTAGAACATCAAACAGAAGGACCCATGGCAGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000240159.8
ENST00000319073.5
ENST00000526349.5
ENST00000527424.6
ENST00000534961.5
CDS-3UTR CAA 90 bp TACTGCCATGGGTCCTTCTGTTTGATGTTCTACATTAGCTCAGATATCCTAGTATACTCCATTGCTTCATaGCTTTATACTGCCATGGGT +
Preference number: 5 (lower is better)
Translates to: YCHGSFCLMFYISSDILVYSIAS*LYTAMG
Trigger: ACCCATGGCAGTATAAAGCAATGAAGCAATGGAGTA...TACTAGGATATCTGAGCTAATGTAGAACATCAAACAGAAGGACCCATGGCAGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000240159.8
ENST00000319073.5
ENST00000526349.5
ENST00000527424.6
ENST00000534961.5
CDS-3UTR CAA 90 bp TGCTTGACAAACTCTTTAATCACAAGGTTTGAACCAAACCACCAGTCTTCTACATACCTTCCTATTGGCTaGATGCTCAAAGACACGAAG +
Preference number: 5 (lower is better)
Translates to: CLTNSLITRFEPNHQSSTYLPIG*MLKDTK
Trigger: CTTCGTGTCTTTGAGCATCAAGCCAATAGGAAGGTA...TGTAGAAGACTGGTGGTTTGGTTCAAACCTTGTGATTAAAGAGTTTGTCAAGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527424.6
ENST00000534961.5
CDS-3UTR CAA 90 bp GAGTTTCACAGCTATATATTATCATATAGGTACCTGCTGAGAAGGATAAGATGGTGCATCCTGTTCTGTTaGAAGCTGTTCTCGAAGTAC +
Preference number: 5 (lower is better)
Translates to: EFHSYILSYRYLLRRIRWCILFC*KLFSKY
Trigger: GTACTTCGAGAACAGCTTCAAACAGAACAGGATGCA...CCATCTTATCCTTCTCAGCAGGTACCTATATGATAATATATAGCTGTGAAACTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000240159.8
ENST00000319073.5
ENST00000526349.5
ENST00000527424.6
ENST00000534961.5
CDS-3UTR CAA 90 bp TTCATTGCTTTATACTGCCATGGGTCCTTCTGTTTGATGTTCTACATTAGCTCACATGGGTCCTTCTGTTaGATGTTCTACATTAGCTCA +
Preference number: 5 (lower is better)
Translates to: FIALYCHGSFCLMFYISSHGSFC*MFYISS
Trigger: TGAGCTAATGTAGAACATCAAACAGAAGGACCCATG...TGAGCTAATGTAGAACATCAAACAGAAGGACCCATGGCAGTATAAAGCAATGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000240159.8
ENST00000319073.5
ENST00000526349.5
ENST00000527424.6
ENST00000534961.5
CDS-3UTR CAA 90 bp GCTTTATACTGCCATGGGTCCTTCTGTTTGATGTTCTACATTAGCTCAGATATCCGAAAGGATGAGCTCTaGTTTAAATGTCTAACTGTG +
Preference number: 5 (lower is better)
Translates to: ALYCHGSFCLMFYISSDIRKDEL*FKCLTV
Trigger: CACAGTTAGACATTTAAACAAGAGCTCATCCTTTCG...GATATCTGAGCTAATGTAGAACATCAAACAGAAGGACCCATGGCAGTATAAAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527424.6
ENST00000534961.5
CDS-3UTR CAA 90 bp GCTTTATACTGCCATGGGTCCTTCTGTTTGATGTTCTACATTAGCTCAGATATCGATACATTCACTTGTTaGGCTCAAGACATGAATCTG +
Preference number: 5 (lower is better)
Translates to: ALYCHGSFCLMFYISSDIDTFTC*AQDMNL
Trigger: CAGATTCATGTCTTGAGCCAAACAAGTGAATGTATC...GATATCTGAGCTAATGTAGAACATCAAACAGAAGGACCCATGGCAGTATAAAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527424.6
ENST00000534961.5
CDS-3UTR CAA 90 bp GAGTTTCACAGCTATATATTATCATATAGGTACCTGCTGAGAAGGATAAGATGGACTTTGAACTTCACCTaGATATTTGGCCATTCCAGG +
Preference number: 5 (lower is better)
Translates to: EFHSYILSYRYLLRRIRWTLNFT*IFGHSR
Trigger: CCTGGAATGGCCAAATATCAAGGTGAAGTTCAAAGT...CCATCTTATCCTTCTCAGCAGGTACCTATATGATAATATATAGCTGTGAAACTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000240159.8
ENST00000319073.5
ENST00000527424.6
ENST00000534961.5
CDS-3UTR CAA 90 bp GTTATAATCATTAATATCCTGATGCAATCTCAGAACATCCTGAGACTGATCATCAACTGCCACAAGTACTaGGTCGCTTACTCCTTCTAT +
Preference number: 5 (lower is better)
Translates to: VIIINILMQSQNILRLIINCHKY*VAYSFY
Trigger: ATAGAAGGAGTAAGCGACCAAGTACTTGTGGCAGTT...GATGATCAGTCTCAGGATGTTCTGAGATTGCATCAGGATATTAATGATTATAAC
39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240159.8
ENST00000319073.5
CDS-3UTR CAA 90 bp GAGTTTCACAGCTATATATTATCATATAGGTACCTGCTGAGAAGGATAAGATGGCATGGGTCCTTCTGTTaGATGTTCTACATTAGCTCA +
Preference number: 5 (lower is better)
Translates to: EFHSYILSYRYLLRRIRWHGSFC*MFYISS
Trigger: TGAGCTAATGTAGAACATCAAACAGAAGGACCCATG...CCATCTTATCCTTCTCAGCAGGTACCTATATGATAATATATAGCTGTGAAACTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000240159.8
ENST00000319073.5
ENST00000526349.5
ENST00000527424.6
ENST00000534961.5
CDS-3UTR CAA 90 bp GAGTTTCACAGCTATATATTATCATATAGGTACCTGCTGAGAAGGATAAGATGGTACTCCATTGCTTCATaGCTTTATACTGCCATGGGT +
Preference number: 5 (lower is better)
Translates to: EFHSYILSYRYLLRRIRWYSIAS*LYTAMG
Trigger: ACCCATGGCAGTATAAAGCAATGAAGCAATGGAGTA...CCATCTTATCCTTCTCAGCAGGTACCTATATGATAATATATAGCTGTGAAACTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000240159.8
ENST00000319073.5
ENST00000526349.5
ENST00000527424.6
ENST00000534961.5
CDS-3UTR CAA 90 bp TTTCATAGAGCTTGTGTTCTAGTGAGAAGCAGACAGACAATGGAAATGTCAATAACTTTTGCACTACTTTaGCACTGCCTACTTTTGGGT +
Preference number: 5 (lower is better)
Translates to: FHRACVLVRSRQTMEMSITFALL*HCLLLG
Trigger: ACCCAAAAGTAGGCAGTGCAAAAGTAGTGCAAAAGT...TATTGACATTTCCATTGTCTGTCTGCTTCTCACTAGAACACAAGCTCTATGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319104.7
CDS-3UTR CAA 90 bp ATGAAAGGGAAGTTGGTGTCCTGCGTTCCTCACAAAATTATCCAAAGGATAAAACTCAGATACATTCACTaGTTTGGCTCAAGACATGAA +
Preference number: 5 (lower is better)
Translates to: MKGKLVSCVPHKIIQRIKLRYIH*FGSRHE
Trigger: TTCATGTCTTGAGCCAAACAAGTGAATGTATCTGAG...TTTTATCCTTTGGATAATTTTGTGAGGAACGCAGGACACCAACTTCCCTTTCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000527424.6
ENST00000534961.5
CDS-3UTR CAA 90 bp GTTATAATCATTAATATCCTGATGCAATCTCAGAACATCCTGAGACTGATCATCTACTCCATTGCTTCATaGCTTTATACTGCCATGGGT +
Preference number: 5 (lower is better)
Translates to: VIIINILMQSQNILRLIIYSIAS*LYTAMG
Trigger: ACCCATGGCAGTATAAAGCAATGAAGCAATGGAGTA...GATGATCAGTCTCAGGATGTTCTGAGATTGCATCAGGATATTAATGATTATAAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000240159.8
ENST00000319073.5
CDS-3UTR CAA 90 bp CTTTATTTATTAATCTTTAATGTGTTGAGCACTACTGTGGTGGCAGGCATAATGGCATTACCATGGATATaGAGACTGCTGGGAATATCT +
Preference number: 5 (lower is better)
Translates to: LYLLIFNVLSTTVVAGIMALPWI*RLLGIS
Trigger: AGATATTCCCAGCAGTCTCAATATCCATGGTAATGC...CATTATGCCTGCCACCACAGTAGTGCTCAACACATTAAAGATTAATAAATAAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319104.7
CDS-3UTR CAA 90 bp GAGTTTCACAGCTATATATTATCATATAGGTACCTGCTGAGAAGGATAAGATGGCTCAGATACATTCACTaGTTTGGCTCAAGACATGAA +
Preference number: 5 (lower is better)
Translates to: EFHSYILSYRYLLRRIRWLRYIH*FGSRHE
Trigger: TTCATGTCTTGAGCCAAACAAGTGAATGTATCTGAG...CCATCTTATCCTTCTCAGCAGGTACCTATATGATAATATATAGCTGTGAAACTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527424.6
ENST00000534961.5
CDS-3UTR CAA 90 bp GAGTTTCACAGCTATATATTATCATATAGGTACCTGCTGAGAAGGATAAGATGGTTTGATGTACATTTCTaGATATTTGGCCATTCCAGG +
Preference number: 5 (lower is better)
Translates to: EFHSYILSYRYLLRRIRWFDVHF*IFGHSR
Trigger: CCTGGAATGGCCAAATATCAAGAAATGTACATCAAA...CCATCTTATCCTTCTCAGCAGGTACCTATATGATAATATATAGCTGTGAAACTC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526349.5
CDS CAA 90 bp CCCGCCACCCCTCCCGGGCAACCCACTAGACGTCCCCTTTCTAATTaGGAGTGCGGGTGCGGGCGCACGCGCACTGCCGAGCTTCCGCGA +
Preference number: 6 (lower is better)
Translates to: PATPPGQPTRRPLSN*ECGCGRTRTAELPR
Trigger: TCGCGGAAGCTCGGCAGTGCGCGTGCGCCCGCACCCGCACTCCAAATTAGAAAGGGGACGTCTAGTGGGTTGCCCGGGAGGGGTGGCGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000240159.8
ENST00000526349.5
ENST00000528318.5
ENST00000534961.5
CDS GCA 72 bp CCCACTAGACGTCCCCTTTCTAATTTGGAGTGCGGGTaGGGGCGCACGCGCACTGCCGAGCTTCCGCGAGGG +
Preference number: 6 (lower is better)
Translates to: PTRRPLSNLECG*GRTRTAELPRG
Trigger: CCCTCGCGGAAGCTCGGCAGTGCGCGTGCGCCCGCACCCGCACTCCAAATTAGAAAGGGGACGTCTAGTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000240159.8
ENST00000526349.5
ENST00000528318.5
ENST00000534961.5
CDS CCA 72 bp CTCCCGGGCAACCCACTAGACGTCCCCTTTCTAATTTaGAGTGCGGGTGCGGGCGCACGCGCACTGCCGAGC +
Preference number: 6 (lower is better)
Translates to: LPGNPLDVPFLI*SAGAGARALPS
Trigger: GCTCGGCAGTGCGCGTGCGCCCGCACCCGCACTCCAAATTAGAAAGGGGACGTCTAGTGGGTTGCCCGGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000240159.8
ENST00000526349.5
ENST00000528318.5
ENST00000534961.5
CDS CAA 72 bp CCTCCCGGGCAACCCACTAGACGTCCCCTTTCTAATTaGGAGTGCGGGTGCGGGCGCACGCGCACTGCCGAG +
Preference number: 6 (lower is better)
Translates to: PPGQPTRRPLSN*ECGCGRTRTAE
Trigger: CTCGGCAGTGCGCGTGCGCCCGCACCCGCACTCCAAATTAGAAAGGGGACGTCTAGTGGGTTGCCCGGGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000240159.8
ENST00000526349.5
ENST00000528318.5
ENST00000534961.5
CDS GCA 72 bp GGGCAACCCACTAGACGTCCCCTTTCTAATTTGGAGTaGGGGTGCGGGCGCACGCGCACTGCCGAGCTTCCG +
Preference number: 6 (lower is better)
Translates to: GQPTRRPLSNLE*GCGRTRTAELP
Trigger: CGGAAGCTCGGCAGTGCGCGTGCGCCCGCACCCGCACTCCAAATTAGAAAGGGGACGTCTAGTGGGTTGCCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000240159.8
ENST00000526349.5
ENST00000528318.5
ENST00000534961.5
CDS TCA 72 bp GAGGCTGAAGGGAGCATTCGGTCATGGGGTATATGCTaGGGCCCTGACCTGCATCCGACTGTACAGGCAGGA +
Preference number: 6 (lower is better)
Translates to: EAEGSIRSWGIC*GPDLHPTVQAG
Trigger: TCCTGCCTGTACAGTCGGATGCAGGTCAGGGCCTCAGCATATACCCCATGACCGAATGCTCCCTTCAGCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319104.7
CDS TCA 72 bp AGGGAGCATTCGGTCATGGGGTATATGCTGAGGCCCTaGCCTGCATCCGACTGTACAGGCAGGAGAGTTCTG +
Preference number: 6 (lower is better)
Translates to: REHSVMGYMLRP*PASDCTGRRVL
Trigger: CAGAACTCTCCTGCCTGTACAGTCGGATGCAGGTCAGGGCCTCAGCATATACCCCATGACCGAATGCTCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319104.7
CDS TCA 72 bp GGAGAGTTCTGTGTGTCCAGGCATGCAACAGCCTCTTaGTGGGTCTGCTCACTTGCACGGCTGCTCTTCTCT +
Preference number: 6 (lower is better)
Translates to: GEFCVSRHATAS*WVCSLARLLFS
Trigger: AGAGAAGAGCAGCCGTGCAAGTGAGCAGACCCATCAAGAGGCTGTTGCATGCCTGGACACACAGAACTCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319104.7
CDS GCA 72 bp GACTGTACAGGCAGGAGAGTTCTGTGTGTCCAGGCATaGAACAGCCTCTTGATGGGTCTGCTCACTTGCACG +
Preference number: 6 (lower is better)
Translates to: DCTGRRVLCVQA*NSLLMGLLTCT
Trigger: CGTGCAAGTGAGCAGACCCATCAAGAGGCTGTTGCATGCCTGGACACACAGAACTCTCCTGCCTGTACAGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319104.7
CDS GCA 72 bp GCATTCGGTCATGGGGTATATGCTGAGGCCCTGACCTaGATCCGACTGTACAGGCAGGAGAGTTCTGTGTGT +
Preference number: 6 (lower is better)
Translates to: AFGHGVYAEALT*IRLYRQESSVC
Trigger: ACACACAGAACTCTCCTGCCTGTACAGTCGGATGCAGGTCAGGGCCTCAGCATATACCCCATGACCGAATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319104.7
CDS CAA 72 bp AGGAGAGTTCTGTGTGTCCAGGCATGCAACAGCCTCTaGATGGGTCTGCTCACTTGCACGGCTGCTCTTCTC +
Preference number: 6 (lower is better)
Translates to: RRVLCVQACNSL*MGLLTCTAALL
Trigger: GAGAAGAGCAGCCGTGCAAGTGAGCAGACCCATCAAGAGGCTGTTGCATGCCTGGACACACAGAACTCTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319104.7
CDS CCA 72 bp CATCCAGTTTCAAACTTTGAACTTCACCTTGATATTTaGCCATTCCAGGTCGGGACCCTCCACGCGCGGCCC +
Preference number: 6 (lower is better)
Translates to: HPVSNFELHLDI*PFQVGTLHARP
Trigger: GGGCCGCGCGTGGAGGGTCCCGACCTGGAATGGCCAAATATCAAGGTGAAGTTCAAAGTTTGAAACTGGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524954.1
CDS CCA 72 bp TGGGACAGTACATGTCAGTGTAGAACTGCTGTCGAGTaGCAGCAGGTGCATCCTGTTCTGTTTGAAGCTGTT +
Preference number: 6 (lower is better)
Translates to: WDSTCQCRTAVE*QQVHPVLFEAV
Trigger: AACAGCTTCAAACAGAACAGGATGCACCTGCTGCCACTCGACAGCAGTTCTACACTGACATGTACTGTCCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000240159.8
ENST00000319073.5
ENST00000319104.7
ENST00000526349.5
ENST00000527424.6
ENST00000528318.5
ENST00000531440.5
ENST00000534961.5
CDS TCA 72 bp TCTCTGATGAACCCGTTTGTCTACAGATTGGACAACTaGTTGCCCCAAGCCATGAACCATATCGCCAGTAAG +
Preference number: 6 (lower is better)
Translates to: SLMNPFVYRLDN*LPQAMNHIASK
Trigger: CTTACTGGCGATATGGTTCATGGCTTGGGGCAATCAGTTGTCCAATCTGTAGACAAACGGGTTCATCAGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319104.7
CDS TCA 72 bp GGAGTAAGGTTACCGTTTGTCTACAGATTGGACAACTaGTTGCCCCAAGCCATGAACCATATCGCCAGTAAG +
Preference number: 6 (lower is better)
Translates to: GVRLPFVYRLDN*LPQAMNHIASK
Trigger: CTTACTGGCGATATGGTTCATGGCTTGGGGCAATCAGTTGTCCAATCTGTAGACAAACGGTAACCTTACTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000526349.5
ENST00000527424.6
ENST00000528318.5
ENST00000534961.5
CDS GCA 72 bp TACCAGGGTAGCAATCAAAGCGAAACTGACCACAACTaGCACAAGTACTTGGTCGCTTACTCCTTCTATAAC +
Preference number: 6 (lower is better)
Translates to: YQGSNQSETDHN*HKYLVAYSFYN
Trigger: GTTATAGAAGGAGTAAGCGACCAAGTACTTGTGGCAGTTGTGGTCAGTTTCGCTTTGATTGCTACCCTGGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000240159.8
ENST00000319073.5
ENST00000319104.7
ENST00000524954.1
ENST00000527424.6
ENST00000528318.5
ENST00000531440.5
ENST00000534961.5
CDS CCA 72 bp CATCCAGTTTCAAACTTTGAACTTCACCTTGATATTTaGCCATTCCAGGTCTCTCCACCGCGAAGGAACTAC +
Preference number: 6 (lower is better)
Translates to: HPVSNFELHLDI*PFQVSPPRRNY
Trigger: GTAGTTCCTTCGCGGTGGAGAGACCTGGAATGGCCAAATATCAAGGTGAAGTTCAAAGTTTGAAACTGGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319073.5
ENST00000319104.7
ENST00000527424.6
ENST00000528318.5
CDS CAA 72 bp CTGCCTACTTTTGCACTACTTTTGCACTGCCTACTTTaGGGTAGTCTGAGTGAGGAGGGAACATTTAACCTG +
Preference number: 6 (lower is better)
Translates to: LPTFALLLHCLL*GSLSEEGTFNL
Trigger: CAGGTTAAATGTTCCCTCCTCACTCAGACTACCCAAAAGTAGGCAGTGCAAAAGTAGTGCAAAAGTAGGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319104.7
CDS CCA 72 bp ATCAAAGCGAAACTGACCACAACTGCCACAAGTACTTaGTCGCTTACTCCTTCTATAACTGAATCATCATCC +
Preference number: 6 (lower is better)
Translates to: IKAKLTTTATST*SLTPSITESSS
Trigger: GGATGATGATTCAGTTATAGAAGGAGTAAGCGACCAAGTACTTGTGGCAGTTGTGGTCAGTTTCGCTTTGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000240159.8
ENST00000319073.5
ENST00000319104.7
ENST00000524954.1
ENST00000527424.6
ENST00000528318.5
ENST00000531440.5
ENST00000534961.5
CDS CAA 72 bp GCCTGGCCAAGATTTCTCATAGTCAAAGAATACTTGTaGGTAAACCTCACTTTACAAAAGAGAAGAAATGTG +
Preference number: 6 (lower is better)
Translates to: AWPRFLIVKEYL*VNLTLQKRRNV
Trigger: CACATTTCTTCTCTTTTGTAAAGTGAGGTTTACCAACAAGTATTCTTTGACTATGAGAAATCTTGGCCAGGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528318.5