Pregenerated sensors for RNF17 (Homo sapiens)
Ensembl gene IDs: ENSG00000132972Ensembl transcript IDs: ENST00000255324.10, ENST00000255325.6, ENST00000255326.4, ENST00000339524.3, ENST00000418120.5
Found 53 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | CACAATGGTGACCGGATGATCTGGATACCCTCCTTCCACACCTGGTaGACTGGATTTCAGCGGCACCCCAGGGCTGACTCTTCCTCCCCA | + |
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Preference number: 5 (lower is better) Translates to: HNGDRMIWIPSFHTW*TGFQRHPRADSSSP Trigger: TGGGGAGGAAGAGTCAGCCCTGGGGTGCCGCTGAAATCCAGTGCACCAGGTGTGGAAGGAGGGTATCCAGATCATCCGGTCACCATTGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000255324.10 ENST00000255325.6 ENST00000255326.4 |
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| CDS GCA 90 bp | AAATCCGTCAGAGGAGGAAGCGCCTCTACCTTCTTATTAACCCTCTaGAGTGCTTCATCAAGGCTCTCGGATTCTGATTCCCCGCTGACT | + |
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Preference number: 5 (lower is better) Translates to: KSVRGGSASTFLLTL*SASSRLSDSDSPLT Trigger: AGTCAGCGGGGAATCAGAATCCGAGAGCCTTGATGAAGCACTGCAGAGGGTTAATAAGAAGGTAGAGGCGCTTCCTCCTCTGACGGATTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000255324.10 ENST00000339524.3 ENST00000418120.5 |
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| CDS TCA 90 bp | CTTCTTATTAACCCTCTGCAGTGCTTCATCAAGGCTCTCGGATTCTaGTTCCCCGCTGACTCCACTATCATCTGTGTCACTATGCTGGTT | + |
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Preference number: 5 (lower is better) Translates to: LLINPLQCFIKALGF*FPADSTIICVTMLV Trigger: AACCAGCATAGTGACACAGATGATAGTGGAGTCAGCGGGGAATCAGAATCCGAGAGCCTTGATGAAGCACTGCAGAGGGTTAATAAGAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000255324.10 ENST00000339524.3 ENST00000418120.5 |
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| CDS TCA 90 bp | CCTGCCAAGAGAACCTTTATGGCTCGAGCTGGATACCGCATAAGATaGGAAGGAATTTGGCACAGTCTGTTTAATGTCAGCTTTGCAGTT | + |
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Preference number: 5 (lower is better) Translates to: PAKRTFMARAGYRIR*EGIWHSLFNVSFAV Trigger: AACTGCAAAGCTGACATTAAACAGACTGTGCCAAATTCCTTCTCATCTTATGCGGTATCCAGCTCGAGCCATAAAGGTTCTCTTGGCAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000255324.10 ENST00000339524.3 |
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| CDS GCA 90 bp | AGCATAGAGTTGTTTTCCTTGAAGACAGTCTATCATAGCCCACAGTaGCTCCATGCTCCATTTGGGACAATATGGTATTCTTGTCTCCCC | + |
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Preference number: 5 (lower is better) Translates to: SIELFSLKTVYHSPQ*LHAPFGTIWYSCLP Trigger: GGGGAGACAAGAATACCATATTGTCCCAAATGGAGCATGGAGGCACTGTGGGCTATGATAGACTGTCTTCAAGGAAAACAACTCTATGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000255324.10 ENST00000339524.3 |
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| CDS GCA 90 bp | AGGTACTACAAATATAGTTCCATCATCACCAACACAGCTGACTGTTaGCTCAAATACGTTCATGTTAGGAATAGCTGGTGGCTTATACCC | + |
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Preference number: 5 (lower is better) Translates to: RYYKYSSIITNTADC*LKYVHVRNSWWLIP Trigger: GGGTATAAGCCACCAGCTATTCCTAACATGAACGTATTTGAGGCAACAGTCAGCTGTGTTGGTGATGATGGAACTATATTTGTAGTACCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000255324.10 ENST00000339524.3 ENST00000418120.5 |
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| CDS GCA 90 bp | TCGGATTCTGATTCCCCGCTGACTCCACTATCATCTGTGTCACTATaGTGGTTAGACTGGTTAGAAGTTTCTATAGAATCAAGGCAAATA | + |
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Preference number: 5 (lower is better) Translates to: SDSDSPLTPLSSVSL*WLDWLEVSIESRQI Trigger: TATTTGCCTTGATTCTATAGAAACTTCTAACCAGTCTAACCAGCATAGTGACACAGATGATAGTGGAGTCAGCGGGGAATCAGAATCCGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000255324.10 ENST00000339524.3 ENST00000418120.5 |
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| CDS TCA 90 bp | TCTTCAATAATTTCTTCAATTATCACATCAGGGCTAGATCCCATCTaGGGTAACACAGCAATGGTTTTAGGGGATGCTGTTGCAACGTCT | + |
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Preference number: 5 (lower is better) Translates to: SSIISSIITSGLDPI*GNTAMVLGDAVATS Trigger: AGACGTTGCAACAGCATCCCCTAAAACCATTGCTGTGTTACCTCAGATGGGATCTAGCCCTGATGTGATAATTGAAGAAATTATTGAAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000255324.10 ENST00000255325.6 ENST00000255326.4 |
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| CDS TCA 90 bp | ACCAATGTGTCTGTAACCATTCTGATGATCTGGCCTCTTCGCCACTaGTTTTTATCTTGGATCTTAACAGCACAGTGCATATCATTTTCC | + |
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Preference number: 5 (lower is better) Translates to: TNVSVTILMIWPLRH*FLSWILTAQCISFS Trigger: GGAAAATGATATGCACTGTGCTGTTAAGATCCAAGATAAAAATCAGTGGCGAAGAGGCCAGATCATCAGAATGGTTACAGACACATTGGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000255324.10 ENST00000339524.3 ENST00000418120.5 |
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| CDS CCA 90 bp | CTGCAGTTTTTCCATTATGGAGTCTTCCTTAATATATCCAGCCATTaGGTAGTAGCGTTGTCTAGTATTTACAGCTGTAGCAACCTCACA | + |
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Preference number: 5 (lower is better) Translates to: LQFFHYGVFLNISSH*VVALSSIYSCSNLT Trigger: TGTGAGGTTGCTACAGCTGTAAATACTAGACAACGCTACTACCCAATGGCTGGATATATTAAGGAAGACTCCATAATGGAAAAACTGCAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000255324.10 ENST00000255325.6 ENST00000255326.4 |
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| CDS CCA 90 bp | TTCTGTGGAACAATGTCTTTCAATGAGCATGGTTGTGCTAATGGCTaGATGTCTTTTAGCAGCCCTTCAGTATATGGTTCAGATTTCCTT | + |
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Preference number: 5 (lower is better) Translates to: FCGTMSFNEHGCANG*MSFSSPSVYGSDFL Trigger: AAGGAAATCTGAACCATATACTGAAGGGCTGCTAAAAGACATCCAGCCATTAGCACAACCATGCTCATTGAAAGACATTGTTCCACAGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000255324.10 ENST00000255325.6 |
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| CDS CCA 90 bp | GATTCTGATTCCCCGCTGACTCCACTATCATCTGTGTCACTATGCTaGTTAGACTGGTTAGAAGTTTCTATAGAATCAAGGCAAATATAC | + |
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Preference number: 5 (lower is better) Translates to: DSDSPLTPLSSVSLC*LDWLEVSIESRQIY Trigger: GTATATTTGCCTTGATTCTATAGAAACTTCTAACCAGTCTAACCAGCATAGTGACACAGATGATAGTGGAGTCAGCGGGGAATCAGAATC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000255324.10 ENST00000339524.3 ENST00000418120.5 |
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| CDS CCA 90 bp | TCCCCGCTGACTCCACTATCATCTGTGTCACTATGCTGGTTAGACTaGTTAGAAGTTTCTATAGAATCAAGGCAAATATACACTTCATTA | + |
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Preference number: 5 (lower is better) Translates to: SPLTPLSSVSLCWLD*LEVSIESRQIYTSL Trigger: TAATGAAGTGTATATTTGCCTTGATTCTATAGAAACTTCTAACCAGTCTAACCAGCATAGTGACACAGATGATAGTGGAGTCAGCGGGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000255324.10 ENST00000339524.3 ENST00000418120.5 |
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| CDS TCA 90 bp | ACTTATTCATCTTTATCTGCAAGCCCCATTTCTACCAACGGCATATaGACTGGATGCTGTTCATCGTCATATAATGTCACTATCTGTTCT | + |
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Preference number: 5 (lower is better) Translates to: TYSSLSASPISTNGI*TGCCSSSYNVTICS Trigger: AGAACAGATAGTGACATTATATGACGATGAACAGCATCCAGTTCATATGCCGTTGGTAGAAATGGGGCTTGCAGATAAAGATGAATAAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000255324.10 ENST00000339524.3 |
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| CDS GCA 90 bp | TGTTTCTCCACAACTTCTATAACTCTTTCTCTTTCCTCTATCGTTTaGTTCTGCATGTGTTCAAGTGCTTTTCCAGCAATGCTTAACTGT | + |
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Preference number: 5 (lower is better) Translates to: CFSTTSITLSLSSIV*FCMCSSAFPAMLNC Trigger: ACAGTTAAGCATTGCTGGAAAAGCACTTGAACACATGCAGAAGCAAACGATAGAGGAAAGAGAAAGAGTTATAGAAGTTGTGGAGAAACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000255324.10 ENST00000255325.6 ENST00000255326.4 |
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| CDS GCA 90 bp | TCAGATTTCCTTAGAACCAGACATAAATCATTTAGTGCAATATGTTaGTTAGCAGAGTGTTCTGGTCTCACATGGGTATCAACAACTCCA | + |
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Preference number: 5 (lower is better) Translates to: SDFLRTRHKSFSAIC*LAECSGLTWVSTTP Trigger: TGGAGTTGTTGATACCCATGTGAGACCAGAACACTCTGCTAAGCAACATATTGCACTAAATGATTTATGTCTGGTTCTAAGGAAATCTGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000255324.10 ENST00000255325.6 |
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| CDS CCA 90 bp | ATCTCTAAGAGACACAGGCATATCACTGCTTATTTTATTCGGTGGTaGTTTTTGCAGATCTACAATAAGCACACCATCTTCTTCTCTAAA | + |
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Preference number: 5 (lower is better) Translates to: ISKRHRHITAYFIRW*FLQIYNKHTIFFSK Trigger: TTTAGAGAAGAAGATGGTGTGCTTATTGTAGATCTGCAAAAACCACCACCGAATAAAATAAGCAGTGATATGCCTGTGTCTCTTAGAGAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000255324.10 ENST00000255325.6 |
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| CDS TCA 90 bp | AAATTCATTCACCTTCTTCTCCAGTACTTTGGCGTCTTTTATTTGTaGATACTTCCGAATGTAGAAATGGCAAGGATCTATTACATGGCT | + |
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Preference number: 5 (lower is better) Translates to: KFIHLLLQYFGVFYL*ILPNVEMARIYYMA Trigger: AGCCATGTAATAGATCCTTGCCATTTCTACATTCGGAAGTATTCACAAATAAAAGACGCCAAAGTACTGGAGAAGAAGGTGAATGAATTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000255324.10 ENST00000255325.6 |
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| CDS TCA 90 bp | CTGAAGATAGAAATCTCCAGGACTATTTATATGACAAACCGTTACTaGAACATCTGTCATTTCTTTAGGCAAAATAGGTGGATGATAGTG | + |
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Preference number: 5 (lower is better) Translates to: LKIEISRTIYMTNRY*NICHFFRQNRWMIV Trigger: CACTATCATCCACCTATTTTGCCTAAAGAAATGACAGATGTTTCAGTAACGGTTTGTCATATAAATAGTCCTGGAGATTTCTATCTTCAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000255324.10 ENST00000418120.5 |
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| CDS GCA 72 bp | GACCGGATGATCTGGATACCCTCCTTCCACACCTGGTaGACTGGATTTCAGCGGCACCCCAGGGCTGACTCT | + |
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Preference number: 6 (lower is better) Translates to: DRMIWIPSFHTW*TGFQRHPRADS Trigger: AGAGTCAGCCCTGGGGTGCCGCTGAAATCCAGTGCACCAGGTGTGGAAGGAGGGTATCCAGATCATCCGGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000255324.10 ENST00000255325.6 ENST00000255326.4 |
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| CDS GCA 72 bp | GTAGGAAGACCTAGAAGGCCCAGTCTTCGAAGCCTCTaGCGCCATCGCTGTCTCTTTCTTCTGGAACAACCG | + |
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Preference number: 6 (lower is better) Translates to: VGRPRRPSLRSL*RHRCLFLLEQP Trigger: CGGTTGTTCCAGAAGAAAGAGACAGCGATGGCGGCAGAGGCTTCGAAGACTGGGCCTTCTAGGTCTTCCTAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000255324.10 |
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| CDS TCA 72 bp | AACCCTCTGCAGTGCTTCATCAAGGCTCTCGGATTCTaGTTCCCCGCTGACTCCACTATCATCTGTGTCACT | + |
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Preference number: 6 (lower is better) Translates to: NPLQCFIKALGF*FPADSTIICVT Trigger: AGTGACACAGATGATAGTGGAGTCAGCGGGGAATCAGAATCCGAGAGCCTTGATGAAGCACTGCAGAGGGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000255324.10 ENST00000339524.3 ENST00000418120.5 |
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| CDS CAA 72 bp | TGTACTCTGACAGCGCCACCTACAACCTCCATCACCTaGCCACGATACCACAGAGTATCGGATCCTCTTACT | + |
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Preference number: 6 (lower is better) Translates to: CTLTAPPTTSIT*PRYHRVSDPLT Trigger: AGTAAGAGGATCCGATACTCTGTGGTATCGTGGCAAGGTGATGGAGGTTGTAGGTGGCGCTGTCAGAGTACA 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000255324.10 ENST00000339524.3 ENST00000418120.5 |
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| CDS GCA 72 bp | AGAGGAGGAAGCGCCTCTACCTTCTTATTAACCCTCTaGAGTGCTTCATCAAGGCTCTCGGATTCTGATTCC | + |
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Preference number: 6 (lower is better) Translates to: RGGSASTFLLTL*SASSRLSDSDS Trigger: GGAATCAGAATCCGAGAGCCTTGATGAAGCACTGCAGAGGGTTAATAAGAAGGTAGAGGCGCTTCCTCCTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000255324.10 ENST00000339524.3 ENST00000418120.5 |
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| CDS CAA 72 bp | CTCCAGTCAGGTACAATGAAAGACAGTCACAAGCTGTaGCTGTCCACTTGTCACTCCCACCAGCTGGTCTTA | + |
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Preference number: 6 (lower is better) Translates to: LQSGTMKDSHKL*LSTCHSHQLVL Trigger: TAAGACCAGCTGGTGGGAGTGACAAGTGGACAGCAACAGCTTGTGACTGTCTTTCATTGTACCTGACTGGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000255324.10 ENST00000339524.3 ENST00000418120.5 |
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| CDS CAA 90 bp | CCAGTCAGGTACAATGAAAGACAGTCACAAGCTGTTGCTGTCCACTaGTCACTCCCACCAGCTGGTCTTATGTCAACCAGAGAACATTCC | + |
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Preference number: 6 (lower is better) Translates to: PVRYNERQSQAVAVH*SLPPAGLMSTREHS Trigger: GGAATGTTCTCTGGTTGACATAAGACCAGCTGGTGGGAGTGACAAGTGGACAGCAACAGCTTGTGACTGTCTTTCATTGTACCTGACTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000255324.10 ENST00000339524.3 ENST00000418120.5 |
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| CDS CAA 90 bp | CTGTTCTGGTGCTGGAGCCATGGACACAGCATAGAGTTGTTTTCCTaGAAGACAGTCTATCATAGCCCACAGTGCCTCCATGCTCCATTT | + |
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Preference number: 6 (lower is better) Translates to: LFWCWSHGHSIELFS*KTVYHSPQCLHAPF Trigger: AAATGGAGCATGGAGGCACTGTGGGCTATGATAGACTGTCTTCAAGGAAAACAACTCTATGCTGTGTCCATGGCTCCAGCACCAGAACAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000255324.10 ENST00000339524.3 |
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| CDS CAA 90 bp | TCTAAATATTGTACTCTGACAGCGCCACCTACAACCTCCATCACCTaGCCACGATACCACAGAGTATCGGATCCTCTTACTGCACATGCT | + |
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Preference number: 6 (lower is better) Translates to: SKYCTLTAPPTTSIT*PRYHRVSDPLTAHA Trigger: AGCATGTGCAGTAAGAGGATCCGATACTCTGTGGTATCGTGGCAAGGTGATGGAGGTTGTAGGTGGCGCTGTCAGAGTACAATATTTAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000255324.10 ENST00000339524.3 ENST00000418120.5 |
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| CDS CCA 72 bp | TTTAAACCCTGCCAAGAGAACCTTTATGGCTCGAGCTaGATACCGCATAAGATGAGAAGGAATTTGGCACAG | + |
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Preference number: 6 (lower is better) Translates to: FKPCQENLYGSS*IPHKMRRNLAQ Trigger: CTGTGCCAAATTCCTTCTCATCTTATGCGGTATCCAGCTCGAGCCATAAAGGTTCTCTTGGCAGGGTTTAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000255324.10 ENST00000339524.3 |
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| CDS CAA 72 bp | CCTGTCTCTTTGAAAGCAGTTGTTGAAGAACTTCTATaGCATCTGGTTGCCAGACATTCCCAACAGGTGTGG | + |
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Preference number: 6 (lower is better) Translates to: PVSLKAVVEELL*HLVARHSQQVW Trigger: CCACACCTGTTGGGAATGTCTGGCAACCAGATGCAATAGAAGTTCTTCAACAACTGCTTTCAAAGAGACAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000255324.10 ENST00000339524.3 ENST00000418120.5 |
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| CDS TCA 72 bp | TGCCAGACATTCCCAACAGGTGTGGTATTATGGAGCTaGCAAGGAATACAAAACTGGGGTATATCAGGATAC | + |
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Preference number: 6 (lower is better) Translates to: CQTFPTGVVLWS*QGIQNWGISGY Trigger: GTATCCTGATATACCCCAGTTTTGTATTCCTTGTCAGCTCCATAATACCACACCTGTTGGGAATGTCTGGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000255324.10 ENST00000339524.3 ENST00000418120.5 |
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| CDS CCA 72 bp | TTGTCTCAGGTTGCAAAGGAGGTGGTGGTGCTTCACTaGTTAGGACAGACATGTCAACCTTTTTCTTTTCTA | + |
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Preference number: 6 (lower is better) Translates to: LSQVAKEVVVLH*LGQTCQPFSFL Trigger: TAGAAAAGAAAAAGGTTGACATGTCTGTCCTAACCAGTGAAGCACCACCACCTCCTTTGCAACCTGAGACAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000255324.10 ENST00000255325.6 ENST00000255326.4 |
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| CDS CAA 90 bp | GAATGTCCACCTGTCTCTTTGAAAGCAGTTGTTGAAGAACTTCTATaGCATCTGGTTGCCAGACATTCCCAACAGGTGTGGTATTATGGA | + |
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Preference number: 6 (lower is better) Translates to: ECPPVSLKAVVEELL*HLVARHSQQVWYYG Trigger: TCCATAATACCACACCTGTTGGGAATGTCTGGCAACCAGATGCAATAGAAGTTCTTCAACAACTGCTTTCAAAGAGACAGGTGGACATTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000255324.10 ENST00000339524.3 ENST00000418120.5 |
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| CDS GCA 72 bp | TTGTTTTCCTTGAAGACAGTCTATCATAGCCCACAGTaGCTCCATGCTCCATTTGGGACAATATGGTATTCT | + |
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Preference number: 6 (lower is better) Translates to: LFSLKTVYHSPQ*LHAPFGTIWYS Trigger: AGAATACCATATTGTCCCAAATGGAGCATGGAGGCACTGTGGGCTATGATAGACTGTCTTCAAGGAAAACAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000255324.10 ENST00000339524.3 |
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| CDS TCA 72 bp | ATTTCTTCAATTATCACATCAGGGCTAGATCCCATCTaGGGTAACACAGCAATGGTTTTAGGGGATGCTGTT | + |
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Preference number: 6 (lower is better) Translates to: ISSIITSGLDPI*GNTAMVLGDAV Trigger: AACAGCATCCCCTAAAACCATTGCTGTGTTACCTCAGATGGGATCTAGCCCTGATGTGATAATTGAAGAAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000255324.10 ENST00000255325.6 ENST00000255326.4 |
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| CDS TCA 72 bp | TCTTTATCTGCAAGCCCCATTTCTACCAACGGCATATaGACTGGATGCTGTTCATCGTCATATAATGTCACT | + |
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Preference number: 6 (lower is better) Translates to: SLSASPISTNGI*TGCCSSSYNVT Trigger: AGTGACATTATATGACGATGAACAGCATCCAGTTCATATGCCGTTGGTAGAAATGGGGCTTGCAGATAAAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000255324.10 ENST00000339524.3 |
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| CDS GCA 72 bp | TCACTGTATACACTTAGGCACTTATTCATCTTTATCTaGAAGCCCCATTTCTACCAACGGCATATGAACTGG | + |
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Preference number: 6 (lower is better) Translates to: SLYTLRHLFIFI*KPHFYQRHMNW Trigger: CCAGTTCATATGCCGTTGGTAGAAATGGGGCTTGCAGATAAAGATGAATAAGTGCCTAAGTGTATACAGTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000255324.10 ENST00000339524.3 |
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| CDS CCA 72 bp | ACAATGTCTTTCAATGAGCATGGTTGTGCTAATGGCTaGATGTCTTTTAGCAGCCCTTCAGTATATGGTTCA | + |
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Preference number: 6 (lower is better) Translates to: TMSFNEHGCANG*MSFSSPSVYGS Trigger: TGAACCATATACTGAAGGGCTGCTAAAAGACATCCAGCCATTAGCACAACCATGCTCATTGAAAGACATTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000255324.10 ENST00000255325.6 |
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| CDS CAA 90 bp | GCACCTAGTTCCAAAATGTCTGAAGGATCAAGGTGTGAACTCCTATaGCAAAATTCATTCACCTTCTTCTCCAGTACTTTGGCGTCTTTT | + |
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Preference number: 6 (lower is better) Translates to: APSSKMSEGSRCELL*QNSFTFFSSTLASF Trigger: AAAAGACGCCAAAGTACTGGAGAAGAAGGTGAATGAATTTTGCAATAGGAGTTCACACCTTGATCCTTCAGACATTTTGGAACTAGGTGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000255324.10 ENST00000255325.6 |
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| CDS TCA 72 bp | AGGGTCAAAGTTAGTTTTAATACAGTTAGTAACTACTaGATCTTCCTGTTCCAGGGGGACTTCCAGAGACTT | + |
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Preference number: 6 (lower is better) Translates to: RVKVSFNTVSNY*IFLFQGDFQRL Trigger: AAGTCTCTGGAAGTCCCCCTGGAACAGGAAGATTCAGTAGTTACTAACTGTATTAAAACTAACTTTGACCCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000255324.10 ENST00000339524.3 ENST00000418120.5 |
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| CDS CCA 72 bp | TTCCATTATGGAGTCTTCCTTAATATATCCAGCCATTaGGTAGTAGCGTTGTCTAGTATTTACAGCTGTAGC | + |
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Preference number: 6 (lower is better) Translates to: FHYGVFLNISSH*VVALSSIYSCS Trigger: GCTACAGCTGTAAATACTAGACAACGCTACTACCCAATGGCTGGATATATTAAGGAAGACTCCATAATGGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000255324.10 ENST00000255325.6 ENST00000255326.4 |
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| CDS CCA 72 bp | AGACACAGGCATATCACTGCTTATTTTATTCGGTGGTaGTTTTTGCAGATCTACAATAAGCACACCATCTTC | + |
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Preference number: 6 (lower is better) Translates to: RHRHITAYFIRW*FLQIYNKHTIF Trigger: GAAGATGGTGTGCTTATTGTAGATCTGCAAAAACCACCACCGAATAAAATAAGCAGTGATATGCCTGTGTCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000255324.10 ENST00000255325.6 |
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| CDS GCA 72 bp | CTTAGAACCAGACATAAATCATTTAGTGCAATATGTTaGTTAGCAGAGTGTTCTGGTCTCACATGGGTATCA | + |
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Preference number: 6 (lower is better) Translates to: LRTRHKSFSAIC*LAECSGLTWVS Trigger: TGATACCCATGTGAGACCAGAACACTCTGCTAAGCAACATATTGCACTAAATGATTTATGTCTGGTTCTAAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000255324.10 ENST00000255325.6 |
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| CDS CAA 72 bp | ACATACAGTAAACTCCACTACATCAAGCTCAGACAGTaGTTACAGTATCTGCTTTTGATCCAAAAGGAACAG | + |
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Preference number: 6 (lower is better) Translates to: TYSKLHYIKLRQ*LQYLLLIQKEQ Trigger: CTGTTCCTTTTGGATCAAAAGCAGATACTGTAACAACTGTCTGAGCTTGATGTAGTGGAGTTTACTGTATGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000255326.4 |
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| CDS CAA 72 bp | TCCAAAATGTCTGAAGGATCAAGGTGTGAACTCCTATaGCAAAATTCATTCACCTTCTTCTCCAGTACTTTG | + |
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Preference number: 6 (lower is better) Translates to: SKMSEGSRCELL*QNSFTFFSSTL Trigger: CAAAGTACTGGAGAAGAAGGTGAATGAATTTTGCAATAGGAGTTCACACCTTGATCCTTCAGACATTTTGGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000255324.10 ENST00000255325.6 |
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| CDS CAA 72 bp | AGGCATATCACTGCTTATTTTATTCGGTGGTGGTTTTaGCAGATCTACAATAAGCACACCATCTTCTTCTCT | + |
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Preference number: 6 (lower is better) Translates to: RHITAYFIRWWF*QIYNKHTIFFS Trigger: AGAGAAGAAGATGGTGTGCTTATTGTAGATCTGCAAAAACCACCACCGAATAAAATAAGCAGTGATATGCCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000255324.10 ENST00000255325.6 |
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| CDS TCA 72 bp | GAATTTTCTCCTGAAATTCAGACACTTTCTGTTCACTaGTTATGTCAGCAGTTTTCTTGTCAGGGTCAAAGT | + |
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Preference number: 6 (lower is better) Translates to: EFSPEIQTLSVH*LCQQFSCQGQS Trigger: ACTTTGACCCTGACAAGAAAACTGCTGACATAATCAGTGAACAGAAAGTGTCTGAATTTCAGGAGAAAATTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000255324.10 ENST00000339524.3 ENST00000418120.5 |
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| CDS TCA 72 bp | TACCCTCTAGTGGTTCTTGGTTCTAGAATTTTCTCCTaGAATTCAGACACTTTCTGTTCACTGATTATGTCA | + |
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Preference number: 6 (lower is better) Translates to: YPLVVLGSRIFS*NSDTFCSLIMS Trigger: TGACATAATCAGTGAACAGAAAGTGTCTGAATTTCAGGAGAAAATTCTAGAACCAAGAACCACTAGAGGGTA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000255324.10 ENST00000339524.3 ENST00000418120.5 |
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| CDS CCA 72 bp | AGTGCTTTTCCAGCAATGCTTAACTGTTCGAAACTATaGTGTGCTGTATTCAATGCTTCATCAATTTCTTCT | + |
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Preference number: 6 (lower is better) Translates to: SAFPAMLNCSKL*CAVFNASSISS Trigger: AGAAGAAATTGATGAAGCATTGAATACAGCACACCATAGTTTCGAACAGTTAAGCATTGCTGGAAAAGCACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000255324.10 ENST00000255325.6 ENST00000255326.4 |
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| CDS CAA 72 bp | TACATCAAGCTCAGACAGTTGTTACAGTATCTGCTTTaGATCCAAAAGGAACAGATGAGTTTTTCTGAAGAG | + |
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Preference number: 6 (lower is better) Translates to: YIKLRQLLQYLL*IQKEQMSFSEE Trigger: CTCTTCAGAAAAACTCATCTGTTCCTTTTGGATCAAAAGCAGATACTGTAACAACTGTCTGAGCTTGATGTA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000255326.4 |
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| CDS CCA 72 bp | TATTGCAAAATTCATTCACCTTCTTCTCCAGTACTTTaGCGTCTTTTATTTGTGAATACTTCCGAATGTAGA | + |
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Preference number: 6 (lower is better) Translates to: YCKIHSPSSPVL*RLLFVNTSECR Trigger: TCTACATTCGGAAGTATTCACAAATAAAAGACGCCAAAGTACTGGAGAAGAAGGTGAATGAATTTTGCAATA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000255324.10 ENST00000255325.6 |
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| CDS CCA 72 bp | TTTAGCTTCTTTGGACCACTGCATTGTCCTTTTATATaGTTCAATATAGGCCAACTTACATTTAATTGCCTT | + |
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Preference number: 6 (lower is better) Translates to: FSFFGPLHCPFI*FNIGQLTFNCL Trigger: AAGGCAATTAAATGTAAGTTGGCCTATATTGAACCATATAAAAGGACAATGCAGTGGTCCAAAGAAGCTAAA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000255324.10 ENST00000418120.5 |
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| CDS CAA 72 bp | GACACTTTCTGTTCACTGATTATGTCAGCAGTTTTCTaGTCAGGGTCAAAGTTAGTTTTAATACAGTTAGTA | + |
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Preference number: 6 (lower is better) Translates to: DTFCSLIMSAVF*SGSKLVLIQLV Trigger: TACTAACTGTATTAAAACTAACTTTGACCCTGACAAGAAAACTGCTGACATAATCAGTGAACAGAAAGTGTC 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000255324.10 ENST00000339524.3 ENST00000418120.5 |
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