RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RNF167 (Homo sapiens)

Ensembl gene IDs: ENSG00000108523

Ensembl transcript IDs: ENST00000262482.11, ENST00000570328.5, ENST00000570492.5, ENST00000571365.1, ENST00000571816.5, ENST00000572382.5, ENST00000572430.5, ENST00000572554.1, ENST00000573404.5, ENST00000575111.5, ENST00000575400.5, ENST00000575524.1, ENST00000576229.5, ENST00000576452.5, ENST00000576965.1

Found 353 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GATGAACAGGCTGCTTGCAAATGGGGCAGGTCTTCCGGGTCTGAGTaGGCCAGGGGTCCACGCAGCGGCTGTGGTAGGCATGAGCACAGG +
Preference number: 1 (lower is better)
Translates to: DEQAACKWGRSSGSE*ARGPRSGCGRHEHR
Trigger: CCTGTGCTCATGCCTACCACAGCCGCTGCGTGGACCCCTGGCTCACTCAGACCCGGAAGACCTGCCCCATTTGCAAGCAGCCTGTTCATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000575400.5
3UTR-3UTR TCA 90 bp TTCCTCTTGGTCTTCGTCCCCAGGACCCCGATGAACAGGCTGCTTGCAAATGGGTCTTCCGGGTCTGAGTaGGCCAGGGGTCCACGCAGC +
Preference number: 2 (lower is better)
Translates to: FLLVFVPRTPMNRLLANGSSGSE*ARGPRS
Trigger: GCTGCGTGGACCCCTGGCTCACTCAGACCCGGAAGA...CCCATTTGCAAGCAGCCTGTTCATCGGGGTCCTGGGGACGAAGACCAAGAGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000575400.5
3UTR-3UTR TCA 90 bp TTCCTCTTGGTCTTCGTCCCCAGGACCCCGATGAACAGGCTGCTTGCAAATGGGCAGGTCTTCCGGGTCTaGGTGAGCCAGGGGTCCACG +
Preference number: 2 (lower is better)
Translates to: FLLVFVPRTPMNRLLANGQVFRV*VSQGST
Trigger: CGTGGACCCCTGGCTCACTCAGACCCGGAAGACCTG...CCCATTTGCAAGCAGCCTGTTCATCGGGGTCCTGGGGACGAAGACCAAGAGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000575400.5
3UTR-3UTR CCA 90 bp GGGATGGAATGTCCCCTATCCCTCAGAAGACTGGAGGGAAGACGACGGTCTGTGGGTAAGGGAGAAGCTTaGGATGGAATGTCCCCTATC +
Preference number: 2 (lower is better)
Translates to: GMECPLSLRRLEGRRRSVGKGEA*DGMSPI
Trigger: GATAGGGGACATTCCATCCCAAGCTTCTCCCTTACC...CACAGACCGTCGTCTTCCCTCCAGTCTTCTGAGGGATAGGGGACATTCCATCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572382.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
ENST00000576965.1
3UTR-3UTR CCA 90 bp CCTATCCCTCAGAAGACTGGAGGGAAGACGACGGTCTGTGCAAATAGGTCACCATATCCCTCAGAAGACTaGAGGGAAGACGACGGTCTG +
Preference number: 2 (lower is better)
Translates to: PIPQKTGGKTTVCANRSPYPSED*REDDGL
Trigger: CAGACCGTCGTCTTCCCTCCAGTCTTCTGAGGGATA...TGGTGACCTATTTGCACAGACCGTCGTCTTCCCTCCAGTCTTCTGAGGGATAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572382.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
ENST00000576965.1
3UTR-3UTR CCA 90 bp TGGAATGTCCCCTATCCCTCAGAAGACTGGAGGGAAGACGACGGTCTGTGCAAATATCCCTCAGAAGACTaGAGGGAAGACGACGGTCTG +
Preference number: 2 (lower is better)
Translates to: WNVPYPSEDWREDDGLCKYPSED*REDDGL
Trigger: CAGACCGTCGTCTTCCCTCCAGTCTTCTGAGGGATA...TTTGCACAGACCGTCGTCTTCCCTCCAGTCTTCTGAGGGATAGGGGACATTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572382.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
ENST00000576965.1
3UTR-3UTR CCA 90 bp TCCCTCAGAAGACTGGAGGGAAGACGACGGTCTGTGCAAATAGGTCACCAGAGGGGTAAGGGAGAAGCTTaGGATGGAATGTCCCCTATC +
Preference number: 2 (lower is better)
Translates to: SLRRLEGRRRSVQIGHQRGKGEA*DGMSPI
Trigger: GATAGGGGACATTCCATCCCAAGCTTCTCCCTTACC...CCTCTGGTGACCTATTTGCACAGACCGTCGTCTTCCCTCCAGTCTTCTGAGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572382.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
ENST00000576965.1
3UTR-3UTR CCA 90 bp TGGAATGTCCCCTATCCCTCAGAAGACTGGAGGGAAGACGACGGTCTGTGCAAAGGTAAGGGAGAAGCTTaGGATGGAATGTCCCCTATC +
Preference number: 2 (lower is better)
Translates to: WNVPYPSEDWREDDGLCKGKGEA*DGMSPI
Trigger: GATAGGGGACATTCCATCCCAAGCTTCTCCCTTACC...TTTGCACAGACCGTCGTCTTCCCTCCAGTCTTCTGAGGGATAGGGGACATTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572382.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
ENST00000576965.1
3UTR TCA 72 bp GCTGCTTGCAAATGGGGCAGGTCTTCCGGGTCTGAGTaGGCCAGGGGTCCACGCAGCGGCTGTGGTAGGCAT +
Preference number: 3 (lower is better)
Translates to: AACKWGRSSGSE*ARGPRSGCGRH
Trigger: ATGCCTACCACAGCCGCTGCGTGGACCCCTGGCTCACTCAGACCCGGAAGACCTGCCCCATTTGCAAGCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000575400.5
CDS-3UTR TCA 90 bp CCCAGGACCCCGATGAACAGGCTGCTTGCAAATGGGGCAGGTCTTCCGGGTCTGCGGGAGGAAAGAGGCTaGGGAGGCCGCGCGTCCTGG +
Preference number: 4 (lower is better)
Translates to: PRTPMNRLLANGAGLPGLREERG*GGRASW
Trigger: CCAGGACGCGCGGCCTCCTCAGCCTCTTTCCTCCCG...CAGACCCGGAAGACCTGCCCCATTTGCAAGCAGCCTGTTCATCGGGGTCCTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000575400.5
CDS-3UTR CCA 90 bp CCGGGTCTGAGTGAGCCAGGGGTCCACGCAGCGGCTGTGGTAGGCATGAGCACAGGGGTGGTGGGGCAATaGGGCTGCAGGCATTGTCTG +
Preference number: 4 (lower is better)
Translates to: PGLSEPGVHAAAVVGMSTGVVGQ*GCRHCL
Trigger: CAGACAATGCCTGCAGCCCCATTGCCCCACCACCCC...TGTGCTCATGCCTACCACAGCCGCTGCGTGGACCCCTGGCTCACTCAGACCCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000575400.5
CDS-3UTR TCA 90 bp GGTAAGGGAGAAGCTTGGGATGGAATGTCCCCTATCCCTCAGAAGACTGGAGGGCCGAGGTCGCTCGAATaGGCCCCCGGGTCGGGGCCG +
Preference number: 4 (lower is better)
Translates to: GKGEAWDGMSPIPQKTGGPRSLE*APGSGP
Trigger: CGGCCCCGACCCGGGGGCTCATTCGAGCGACCTCGG...CCCTCCAGTCTTCTGAGGGATAGGGGACATTCCATCCCAAGCTTCTCCCTTACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
CDS-3UTR TCA 90 bp TCCCTCAGAAGACTGGAGGGAAGACGACGGTCTGTGCAAATAGGTCACCAGAGGCCGAGGTCGCTCGAATaGGCCCCCGGGTCGGGGCCG +
Preference number: 4 (lower is better)
Translates to: SLRRLEGRRRSVQIGHQRPRSLE*APGSGP
Trigger: CGGCCCCGACCCGGGGGCTCATTCGAGCGACCTCGG...CCTCTGGTGACCTATTTGCACAGACCGTCGTCTTCCCTCCAGTCTTCTGAGGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
CDS-3UTR TCA 90 bp CCCAGGACCCCGATGAACAGGCTGCTTGCAAATGGGGCAGGTCTTCCGGGTCTGCAGGTCTTCCGGGTCTaGGTGAGCCAGGGGTCCACG +
Preference number: 4 (lower is better)
Translates to: PRTPMNRLLANGAGLPGLQVFRV*VSQGST
Trigger: CGTGGACCCCTGGCTCACTCAGACCCGGAAGACCTG...CAGACCCGGAAGACCTGCCCCATTTGCAAGCAGCCTGTTCATCGGGGTCCTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000575400.5
CDS-3UTR GCA 90 bp CTGAGTGAGCCAGGGGTCCACGCAGCGGCTGTGGTAGGCATGAGCACAGGGGAGGTTCTGCGCCCTCCCTaGCCCTCCTTTAGGATCCCA +
Preference number: 4 (lower is better)
Translates to: LSEPGVHAAAVVGMSTGEVLRPP*PSFRIP
Trigger: TGGGATCCTAAAGGAGGGGCAGGGAGGGCGCAGAAC...CTCCCCTGTGCTCATGCCTACCACAGCCGCTGCGTGGACCCCTGGCTCACTCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000575400.5
CDS-3UTR TCA 90 bp GGGATGGAATGTCCCCTATCCCTCAGAAGACTGGAGGGAAGACGACGGTCTGTGCGGGAGGAAAGAGGCTaGGGAGGCCGCGCGTCCTGG +
Preference number: 4 (lower is better)
Translates to: GMECPLSLRRLEGRRRSVREERG*GGRASW
Trigger: CCAGGACGCGCGGCCTCCTCAGCCTCTTTCCTCCCG...CACAGACCGTCGTCTTCCCTCCAGTCTTCTGAGGGATAGGGGACATTCCATCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262482.11
ENST00000575111.5
CDS-3UTR TCA 90 bp GGTGTGGGTAAGGGAGAAGCTTGGGATGGAATGTCCCCTATCCCTCAGAAGACTCCGAGGTCGCTCGAATaGGCCCCCGGGTCGGGGCCG +
Preference number: 4 (lower is better)
Translates to: GVGKGEAWDGMSPIPQKTPRSLE*APGSGP
Trigger: CGGCCCCGACCCGGGGGCTCATTCGAGCGACCTCGG...AGTCTTCTGAGGGATAGGGGACATTCCATCCCAAGCTTCTCCCTTACCCACACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
CDS-3UTR TCA 90 bp CTTGGGATGGAATGTCCCCTATCCCTCAGAAGACTGGAGGGAAGACGACGGTCTCGGGAGGAAAGAGGCTaGGGAGGCCGCGCGTCCCGT +
Preference number: 4 (lower is better)
Translates to: LGMECPLSLRRLEGRRRSREERG*GGRASR
Trigger: ACGGGACGCGCGGCCTCCTCAGCCTCTTTCCTCCCG...AGACCGTCGTCTTCCCTCCAGTCTTCTGAGGGATAGGGGACATTCCATCCCAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571816.5
CDS-3UTR TCA 90 bp AAGGGAGAAGCTTGGGATGGAATGTCCCCTATCCCTCAGAAGACTGGAGGGAAGCGGGAGGAAAGAGGCTaGGGAGGCCGCGCGTCCTGG +
Preference number: 4 (lower is better)
Translates to: KGEAWDGMSPIPQKTGGKREERG*GGRASW
Trigger: CCAGGACGCGCGGCCTCCTCAGCCTCTTTCCTCCCG...CTTCCCTCCAGTCTTCTGAGGGATAGGGGACATTCCATCCCAAGCTTCTCCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262482.11
ENST00000575111.5
CDS-3UTR TCA 90 bp AAAAGGATAGGTGTGGGTAAGGGAGAAGCTTGGGATGGAATGTCCCCTATCCCTCCGAGGTCGCTCGAATaGGCCCCCGGGTCGGGGCCG +
Preference number: 4 (lower is better)
Translates to: KRIGVGKGEAWDGMSPIPPRSLE*APGSGP
Trigger: CGGCCCCGACCCGGGGGCTCATTCGAGCGACCTCGG...AGGGATAGGGGACATTCCATCCCAAGCTTCTCCCTTACCCACACCTATCCTTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
CDS-3UTR TCA 90 bp TCCCTCAGAAGACTGGAGGGAAGACGACGGTCTGTGCAAATAGGTCACCAGAGGTCTTCCGGGTCTGAGTaGGCCAGGGGTCCACGCAGC +
Preference number: 4 (lower is better)
Translates to: SLRRLEGRRRSVQIGHQRSSGSE*ARGPRS
Trigger: GCTGCGTGGACCCCTGGCTCACTCAGACCCGGAAGA...CCTCTGGTGACCTATTTGCACAGACCGTCGTCTTCCCTCCAGTCTTCTGAGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572382.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
ENST00000576965.1
CDS-3UTR TCA 90 bp GGTAAGGGAGAAGCTTGGGATGGAATGTCCCCTATCCCTCAGAAGACTGGAGGGTCTTCCGGGTCTGAGTaGGCCAGGGGTCCACGCAGC +
Preference number: 4 (lower is better)
Translates to: GKGEAWDGMSPIPQKTGGSSGSE*ARGPRS
Trigger: GCTGCGTGGACCCCTGGCTCACTCAGACCCGGAAGA...CCCTCCAGTCTTCTGAGGGATAGGGGACATTCCATCCCAAGCTTCTCCCTTACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572382.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
ENST00000576965.1
CDS-3UTR TCA 90 bp CTTGAGTTTCTTCCTCTTGGTCTTCGTCCCCAGGACCCCGATGAACAGGCTGCTTCTTCCGGGTCTGAGTaGGCCAGGGGTCCACGCAGC +
Preference number: 4 (lower is better)
Translates to: LEFLPLGLRPQDPDEQAASSGSE*ARGPRS
Trigger: GCTGCGTGGACCCCTGGCTCACTCAGACCCGGAAGA...AGCAGCCTGTTCATCGGGGTCCTGGGGACGAAGACCAAGAGGAAGAAACTCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000575400.5
CDS-3UTR TCA 90 bp GATGGAATGTCCCCTATCCCTCAGAAGACTGGAGGGAAGACGACGGTCTGTGCATCTTCCGGGTCTGAGTaGGCCAGGGGTCCACGCAGC +
Preference number: 4 (lower is better)
Translates to: DGMSPIPQKTGGKTTVCASSGSE*ARGPRS
Trigger: GCTGCGTGGACCCCTGGCTCACTCAGACCCGGAAGA...TGCACAGACCGTCGTCTTCCCTCCAGTCTTCTGAGGGATAGGGGACATTCCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572382.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
ENST00000576965.1
CDS-3UTR TCA 90 bp GGGAGAAGCTTGGGATGGAATGTCCCCTATCCCTCAGAAGACTGGAGGGAAGACTCTTCCGGGTCTGAGTaGGCCAGGGGTCCACGCAGC +
Preference number: 4 (lower is better)
Translates to: GRSLGWNVPYPSEDWREDSSGSE*ARGPRS
Trigger: GCTGCGTGGACCCCTGGCTCACTCAGACCCGGAAGA...GTCTTCCCTCCAGTCTTCTGAGGGATAGGGGACATTCCATCCCAAGCTTCTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572382.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
ENST00000576965.1
CDS-3UTR TCA 90 bp GTGTGGGTAAGGGAGAAGCTTGGGATGGAATGTCCCCTATCCCTCAGAAGACTGCGGGAGGAAAGAGGCTaGGGAGGCCGCGCGTCACAG +
Preference number: 4 (lower is better)
Translates to: VWVREKLGMECPLSLRRLREERG*GGRASQ
Trigger: CTGTGACGCGCGGCCTCCTCAGCCTCTTTCCTCCCG...CAGTCTTCTGAGGGATAGGGGACATTCCATCCCAAGCTTCTCCCTTACCCACAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572430.5
CDS-3UTR GCA 90 bp AAAAGGATAGGTGTGGGTAAGGGAGAAGCTTGGGATGGAATGTCCCCTATCCCTTTTGCGCTGCGCGCCTaGGCCCGCGCCGGCTTCCAG +
Preference number: 4 (lower is better)
Translates to: KRIGVGKGEAWDGMSPIPFALRA*ARAGFQ
Trigger: CTGGAAGCCGGCGCGGGCGCAGGCGCGCAGCGCAAA...AGGGATAGGGGACATTCCATCCCAAGCTTCTCCCTTACCCACACCTATCCTTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000571816.5
CDS-3UTR CCA 90 bp GCCCTTGAGTTTCTTCCTCTTGGTCTTCGTCCCCAGGACCCCGATGAACAGGCTCACTTCCCAGCTACATaGGGGCGCCGGGGAAGGAAC +
Preference number: 4 (lower is better)
Translates to: ALEFLPLGLRPQDPDEQAHFPAT*GRRGRN
Trigger: GTTCCTTCCCCGGCGCCCCCATGTAGCTGGGAAGTG...AGCCTGTTCATCGGGGTCCTGGGGACGAAGACCAAGAGGAAGAAACTCAAGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000575400.5
CDS-3UTR CCA 90 bp GCTTGGGATGGAATGTCCCCTATCCCTCAGAAGACTGGAGGGAAGACGACGGTCAGGCTGCAGGGTGCATaGCAGCGGGAGGAAAGAGGC +
Preference number: 4 (lower is better)
Translates to: AWDGMSPIPQKTGGKTTVRLQGA*QREERG
Trigger: GCCTCTTTCCTCCCGCTGCCATGCACCCTGCAGCCT...GACCGTCGTCTTCCCTCCAGTCTTCTGAGGGATAGGGGACATTCCATCCCAAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572430.5
ENST00000575111.5
CDS-3UTR CCA 90 bp CCGGGTCTGAGTGAGCCAGGGGTCCACGCAGCGGCTGTGGTAGGCATGAGCACACCATATCCAGCCTTCTaGGCATTTAGGACCTTGAGG +
Preference number: 4 (lower is better)
Translates to: PGLSEPGVHAAAVVGMSTPYPAF*AFRTLR
Trigger: CCTCAAGGTCCTAAATGCCCAGAAGGCTGGATATGG...TGTGCTCATGCCTACCACAGCCGCTGCGTGGACCCCTGGCTCACTCAGACCCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575400.5
CDS-3UTR TCA 90 bp CCGATGAACAGGCTGCTTGCAAATGGGGCAGGTCTTCCGGGTCTGAGTGAGCCACAGCGCAATAAAGACTaGCCCATTGACCGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: PMNRLLANGAGLPGLSEPQRNKD*PIDRGW
Trigger: CCAGCCCCGGTCAATGGGTCAGTCTTTATTGCGCTG...TGGCTCACTCAGACCCGGAAGACCTGCCCCATTTGCAAGCAGCCTGTTCATCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000575400.5
CDS-3UTR TCA 90 bp TGGAATGTCCCCTATCCCTCAGAAGACTGGAGGGAAGACGACGGTCTGTGCAAATCTTCCGGGTCTGAGTaGGCCAGGGGTCCACGCAGC +
Preference number: 4 (lower is better)
Translates to: WNVPYPSEDWREDDGLCKSSGSE*ARGPRS
Trigger: GCTGCGTGGACCCCTGGCTCACTCAGACCCGGAAGA...TTTGCACAGACCGTCGTCTTCCCTCCAGTCTTCTGAGGGATAGGGGACATTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572382.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
ENST00000576965.1
CDS-3UTR TCA 90 bp GAGAAGCTTGGGATGGAATGTCCCCTATCCCTCAGAAGACTGGAGGGAAGACGATCTTCCGGGTCTGAGTaGGCCAGGGGTCCACGCAGC +
Preference number: 4 (lower is better)
Translates to: EKLGMECPLSLRRLEGRRSSGSE*ARGPRS
Trigger: GCTGCGTGGACCCCTGGCTCACTCAGACCCGGAAGA...TCGTCTTCCCTCCAGTCTTCTGAGGGATAGGGGACATTCCATCCCAAGCTTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572382.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
ENST00000576965.1
CDS-3UTR TCA 90 bp AGAAGCTTGGGATGGAATGTCCCCTATCCCTCAGAAGACTGGAGGGAAGACGACCAGGTCTTCCGGGTCTaGGTGAGCCAGGGGTCCACG +
Preference number: 4 (lower is better)
Translates to: RSLGWNVPYPSEDWREDDQVFRV*VSQGST
Trigger: CGTGGACCCCTGGCTCACTCAGACCCGGAAGACCTG...GTCGTCTTCCCTCCAGTCTTCTGAGGGATAGGGGACATTCCATCCCAAGCTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572382.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
ENST00000576965.1
CDS-3UTR TCA 90 bp AAGGGAGAAGCTTGGGATGGAATGTCCCCTATCCCTCAGAAGACTGGAGGGAAGCAGGTCTTCCGGGTCTaGGTGAGCCAGGGGTCCACG +
Preference number: 4 (lower is better)
Translates to: KGEAWDGMSPIPQKTGGKQVFRV*VSQGST
Trigger: CGTGGACCCCTGGCTCACTCAGACCCGGAAGACCTG...CTTCCCTCCAGTCTTCTGAGGGATAGGGGACATTCCATCCCAAGCTTCTCCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572382.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
ENST00000576965.1
CDS-3UTR TCA 90 bp ATCCCTCAGAAGACTGGAGGGAAGACGACGGTCTGTGCAAATAGGTCACCAGAGCAGGTCTTCCGGGTCTaGGTGAGCCAGGGGTCCACG +
Preference number: 4 (lower is better)
Translates to: IPQKTGGKTTVCANRSPEQVFRV*VSQGST
Trigger: CGTGGACCCCTGGCTCACTCAGACCCGGAAGACCTG...CTCTGGTGACCTATTTGCACAGACCGTCGTCTTCCCTCCAGTCTTCTGAGGGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572382.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
ENST00000576965.1
CDS-3UTR TCA 90 bp CCTATCCCTCAGAAGACTGGAGGGAAGACGACGGTCTGTGCAAATAGGTCACCACAGGTCTTCCGGGTCTaGGTGAGCCAGGGGTCCACG +
Preference number: 4 (lower is better)
Translates to: PIPQKTGGKTTVCANRSPQVFRV*VSQGST
Trigger: CGTGGACCCCTGGCTCACTCAGACCCGGAAGACCTG...TGGTGACCTATTTGCACAGACCGTCGTCTTCCCTCCAGTCTTCTGAGGGATAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572382.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
ENST00000576965.1
CDS-3UTR TCA 90 bp AGGATAGGTGTGGGTAAGGGAGAAGCTTGGGATGGAATGTCCCCTATCCCTCAGCAGGTCTTCCGGGTCTaGGTGAGCCAGGGGTCCACG +
Preference number: 4 (lower is better)
Translates to: RIGVGKGEAWDGMSPIPQQVFRV*VSQGST
Trigger: CGTGGACCCCTGGCTCACTCAGACCCGGAAGACCTG...CTGAGGGATAGGGGACATTCCATCCCAAGCTTCTCCCTTACCCACACCTATCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572382.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
ENST00000576965.1
CDS-3UTR TCA 90 bp CCGATGAACAGGCTGCTTGCAAATGGGGCAGGTCTTCCGGGTCTGAGTGAGCCATCCCCAGGACCCCGATaGACAGGCTGCTTGCAAATG +
Preference number: 4 (lower is better)
Translates to: PMNRLLANGAGLPGLSEPSPGPR*TGCLQM
Trigger: CATTTGCAAGCAGCCTGTTCATCGGGGTCCTGGGGA...TGGCTCACTCAGACCCGGAAGACCTGCCCCATTTGCAAGCAGCCTGTTCATCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000575400.5
CDS-3UTR TCA 90 bp TGTCCCCTATCCCTCAGAAGACTGGAGGGAAGACGACGGTCTGTGCAAATAGGTGTGAGGGCCTCACCATaGGCACAGGGGAGTACCCGC +
Preference number: 4 (lower is better)
Translates to: CPLSLRRLEGRRRSVQIGVRASP*AQGSTR
Trigger: GCGGGTACTCCCCTGTGCTCATGGTGAGGCCCTCAC...ACCTATTTGCACAGACCGTCGTCTTCCCTCCAGTCTTCTGAGGGATAGGGGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572382.5
CDS-3UTR GCA 90 bp TCCCTCAGAAGACTGGAGGGAAGACGACGGTCTGTGCAAATAGGTCACCAGAGGGAAGCACCTGGTGGCTaGTGGTGGCAGAGGGGCATG +
Preference number: 4 (lower is better)
Translates to: SLRRLEGRRRSVQIGHQREAPGG*WWQRGM
Trigger: CATGCCCCTCTGCCACCAGCAGCCACCAGGTGCTTC...CCTCTGGTGACCTATTTGCACAGACCGTCGTCTTCCCTCCAGTCTTCTGAGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572382.5
CDS-3UTR CCA 90 bp CTTGGGATGGAATGTCCCCTATCCCTCAGAAGACTGGAGGGAAGACGACGGTCTCACTTCCCAGCTACATaGGGGCGCCGGGGAAGGAAC +
Preference number: 4 (lower is better)
Translates to: LGMECPLSLRRLEGRRRSHFPAT*GRRGRN
Trigger: GTTCCTTCCCCGGCGCCCCCATGTAGCTGGGAAGTG...AGACCGTCGTCTTCCCTCCAGTCTTCTGAGGGATAGGGGACATTCCATCCCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262482.11
ENST00000575111.5
CDS-3UTR CCA 90 bp GATGGAATGTCCCCTATCCCTCAGAAGACTGGAGGGAAGACGACGGTCTGTGCAAGGCTGCAGGGTGCATaGCAGCGGGAGGAAAGAGGC +
Preference number: 4 (lower is better)
Translates to: DGMSPIPQKTGGKTTVCARLQGA*QREERG
Trigger: GCCTCTTTCCTCCCGCTGCCATGCACCCTGCAGCCT...TGCACAGACCGTCGTCTTCCCTCCAGTCTTCTGAGGGATAGGGGACATTCCATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572430.5
ENST00000575111.5
CDS-3UTR CCA 90 bp CTTGGGATGGAATGTCCCCTATCCCTCAGAAGACTGGAGGGAAGACGACGGTCTGGGGTGGTGGGGCAATaGGGCTGCAGGCATTGTCTG +
Preference number: 4 (lower is better)
Translates to: LGMECPLSLRRLEGRRRSGVVGQ*GCRHCL
Trigger: CAGACAATGCCTGCAGCCCCATTGCCCCACCACCCC...AGACCGTCGTCTTCCCTCCAGTCTTCTGAGGGATAGGGGACATTCCATCCCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
CDS-3UTR CCA 90 bp GAAGCTTGGGATGGAATGTCCCCTATCCCTCAGAAGACTGGAGGGAAGACGACGGGGGTGGTGGGGCAATaGGGCTGCAGGCATTGTCTG +
Preference number: 4 (lower is better)
Translates to: EAWDGMSPIPQKTGGKTTGVVGQ*GCRHCL
Trigger: CAGACAATGCCTGCAGCCCCATTGCCCCACCACCCC...CGTCGTCTTCCCTCCAGTCTTCTGAGGGATAGGGGACATTCCATCCCAAGCTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
CDS-3UTR CCA 90 bp CTTGGGATGGAATGTCCCCTATCCCTCAGAAGACTGGAGGGAAGACGACGGTCTGGCAGGGTGGTCCCTTaGCTCCCCTTCATCACCCTC +
Preference number: 4 (lower is better)
Translates to: LGMECPLSLRRLEGRRRSGRVVP*LPFITL
Trigger: GAGGGTGATGAAGGGGAGCCAAGGGACCACCCTGCC...AGACCGTCGTCTTCCCTCCAGTCTTCTGAGGGATAGGGGACATTCCATCCCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572382.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
ENST00000576965.1
CDS-3UTR CCA 90 bp TTGGGATGGAATGTCCCCTATCCCTCAGAAGACTGGAGGGAAGACGACGGTCTGGGCAGGGTGGTCCCTTaGCTCCCCTTCATCACCCTC +
Preference number: 4 (lower is better)
Translates to: LGWNVPYPSEDWREDDGLGRVVP*LPFITL
Trigger: GAGGGTGATGAAGGGGAGCCAAGGGACCACCCTGCC...CAGACCGTCGTCTTCCCTCCAGTCTTCTGAGGGATAGGGGACATTCCATCCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572382.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
ENST00000576965.1
CDS-3UTR CCA 90 bp GATGGAATGTCCCCTATCCCTCAGAAGACTGGAGGGAAGACGACGGTCTGTGCAGGCAGGGTGGTCCCTTaGCTCCCCTTCATCACCCTC +
Preference number: 4 (lower is better)
Translates to: DGMSPIPQKTGGKTTVCAGRVVP*LPFITL
Trigger: GAGGGTGATGAAGGGGAGCCAAGGGACCACCCTGCC...TGCACAGACCGTCGTCTTCCCTCCAGTCTTCTGAGGGATAGGGGACATTCCATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572382.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
ENST00000576965.1
CDS-3UTR CCA 90 bp GGTAAGGGAGAAGCTTGGGATGGAATGTCCCCTATCCCTCAGAAGACTGGAGGGGGCAGGGTGGTCCCTTaGCTCCCCTTCATCACCCTC +
Preference number: 4 (lower is better)
Translates to: GKGEAWDGMSPIPQKTGGGRVVP*LPFITL
Trigger: GAGGGTGATGAAGGGGAGCCAAGGGACCACCCTGCC...CCCTCCAGTCTTCTGAGGGATAGGGGACATTCCATCCCAAGCTTCTCCCTTACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572382.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
ENST00000576965.1
CDS-3UTR TCA 90 bp ATAGGTGTGGGTAAGGGAGAAGCTTGGGATGGAATGTCCCCTATCCCTCAGAAGCAGGTCTTCCGGGTCTaGGTGAGCCAGGGGTCCACG +
Preference number: 4 (lower is better)
Translates to: IGVGKGEAWDGMSPIPQKQVFRV*VSQGST
Trigger: CGTGGACCCCTGGCTCACTCAGACCCGGAAGACCTG...CTTCTGAGGGATAGGGGACATTCCATCCCAAGCTTCTCCCTTACCCACACCTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572382.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
ENST00000576965.1
CDS-3UTR GCA 90 bp GGTAAGGGAGAAGCTTGGGATGGAATGTCCCCTATCCCTCAGAAGACTGGAGGGGTTCTGCGCCCTCCCTaGCCCTCCTTTAGGATCCCA +
Preference number: 4 (lower is better)
Translates to: GKGEAWDGMSPIPQKTGGVLRPP*PSFRIP
Trigger: TGGGATCCTAAAGGAGGGGCAGGGAGGGCGCAGAAC...CCCTCCAGTCTTCTGAGGGATAGGGGACATTCCATCCCAAGCTTCTCCCTTACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262482.11
ENST00000575111.5
CDS-3UTR GCA 90 bp CTTGAGTTTCTTCCTCTTGGTCTTCGTCCCCAGGACCCCGATGAACAGGCTGCTGTGGGGCAATGGGGCTaGAGGCATTGTCTGGGTGAG +
Preference number: 4 (lower is better)
Translates to: LEFLPLGLRPQDPDEQAAVGQWG*RHCLGE
Trigger: CTCACCCAGACAATGCCTGCAGCCCCATTGCCCCAC...AGCAGCCTGTTCATCGGGGTCCTGGGGACGAAGACCAAGAGGAAGAAACTCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000575400.5
CDS-3UTR CCA 90 bp TTGGGATGGAATGTCCCCTATCCCTCAGAAGACTGGAGGGAAGACGACGGTCTGGGACTTCCTGCTAGGTaGGCCGTGTTCCCAGCCTCT +
Preference number: 4 (lower is better)
Translates to: LGWNVPYPSEDWREDDGLGLPAR*AVFPAS
Trigger: AGAGGCTGGGAACACGGCCCACCTAGCAGGAAGTCC...CAGACCGTCGTCTTCCCTCCAGTCTTCTGAGGGATAGGGGACATTCCATCCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
CDS-3UTR CCA 90 bp GGGAGAAGCTTGGGATGGAATGTCCCCTATCCCTCAGAAGACTGGAGGGAAGACCGGAGCTCAAGGAGGTaGGACTTCCTGCTAGGTGGG +
Preference number: 4 (lower is better)
Translates to: GRSLGWNVPYPSEDWREDRSSRR*DFLLGG
Trigger: CCCACCTAGCAGGAAGTCCCACCTCCTTGAGCTCCG...GTCTTCCCTCCAGTCTTCTGAGGGATAGGGGACATTCCATCCCAAGCTTCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
CDS-3UTR CCA 90 bp TGTCCCCTATCCCTCAGAAGACTGGAGGGAAGACGACGGTCTGTGCAAATAGGTAGGCTGCAGGGTGCATaGCAGCGGGAGGAAAGAGGC +
Preference number: 4 (lower is better)
Translates to: CPLSLRRLEGRRRSVQIGRLQGA*QREERG
Trigger: GCCTCTTTCCTCCCGCTGCCATGCACCCTGCAGCCT...ACCTATTTGCACAGACCGTCGTCTTCCCTCCAGTCTTCTGAGGGATAGGGGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572430.5
ENST00000575111.5
CDS-3UTR CCA 90 bp AGGGAGAAGCTTGGGATGGAATGTCCCCTATCCCTCAGAAGACTGGAGGGAAGAAGGCTGCAGGGTGCATaGCAGCGGGAGGAAAGAGGC +
Preference number: 4 (lower is better)
Translates to: REKLGMECPLSLRRLEGRRLQGA*QREERG
Trigger: GCCTCTTTCCTCCCGCTGCCATGCACCCTGCAGCCT...TCTTCCCTCCAGTCTTCTGAGGGATAGGGGACATTCCATCCCAAGCTTCTCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572430.5
ENST00000575111.5
CDS-3UTR CCA 90 bp TTGAGTTTCTTCCTCTTGGTCTTCGTCCCCAGGACCCCGATGAACAGGCTGCTTAGGCTGCAGGGTGCATaGCAGCGGGAGGAAAGAGGC +
Preference number: 4 (lower is better)
Translates to: LSFFLLVFVPRTPMNRLLRLQGA*QREERG
Trigger: GCCTCTTTCCTCCCGCTGCCATGCACCCTGCAGCCT...AAGCAGCCTGTTCATCGGGGTCCTGGGGACGAAGACCAAGAGGAAGAAACTCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000575400.5
CDS-3UTR CCA 90 bp GAGAAGCTTGGGATGGAATGTCCCCTATCCCTCAGAAGACTGGAGGGAAGACGAGGGGTGGTGGGGCAATaGGGCTGCAGGCATTGTCTG +
Preference number: 4 (lower is better)
Translates to: EKLGMECPLSLRRLEGRRGVVGQ*GCRHCL
Trigger: CAGACAATGCCTGCAGCCCCATTGCCCCACCACCCC...TCGTCTTCCCTCCAGTCTTCTGAGGGATAGGGGACATTCCATCCCAAGCTTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
CDS-3UTR CCA 90 bp AAGGGAGAAGCTTGGGATGGAATGTCCCCTATCCCTCAGAAGACTGGAGGGAAGGGGGTGGTGGGGCAATaGGGCTGCAGGCATTGTCTG +
Preference number: 4 (lower is better)
Translates to: KGEAWDGMSPIPQKTGGKGVVGQ*GCRHCL
Trigger: CAGACAATGCCTGCAGCCCCATTGCCCCACCACCCC...CTTCCCTCCAGTCTTCTGAGGGATAGGGGACATTCCATCCCAAGCTTCTCCCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
CDS-3UTR CCA 90 bp GGGATGGAATGTCCCCTATCCCTCAGAAGACTGGAGGGAAGACGACGGTCTGTGCAGGCTGCTTGCAAATaGGGCAGGTCTTCCGGGTCT +
Preference number: 4 (lower is better)
Translates to: GMECPLSLRRLEGRRRSVQAACK*GRSSGS
Trigger: AGACCCGGAAGACCTGCCCCATTTGCAAGCAGCCTG...CACAGACCGTCGTCTTCCCTCCAGTCTTCTGAGGGATAGGGGACATTCCATCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572382.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
ENST00000576965.1
CDS-3UTR CCA 90 bp TGGGTAAGGGAGAAGCTTGGGATGGAATGTCCCCTATCCCTCAGAAGACTGGAGGGCAGGGTGGTCCCTTaGCTCCCCTTCATCACCCTC +
Preference number: 4 (lower is better)
Translates to: WVREKLGMECPLSLRRLEGRVVP*LPFITL
Trigger: GAGGGTGATGAAGGGGAGCCAAGGGACCACCCTGCC...CTCCAGTCTTCTGAGGGATAGGGGACATTCCATCCCAAGCTTCTCCCTTACCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572382.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
ENST00000576965.1
CDS-3UTR CCA 90 bp GTGTGGGTAAGGGAGAAGCTTGGGATGGAATGTCCCCTATCCCTCAGAAGACTGGGCAGGGTGGTCCCTTaGCTCCCCTTCATCACCCTC +
Preference number: 4 (lower is better)
Translates to: VWVREKLGMECPLSLRRLGRVVP*LPFITL
Trigger: GAGGGTGATGAAGGGGAGCCAAGGGACCACCCTGCC...CAGTCTTCTGAGGGATAGGGGACATTCCATCCCAAGCTTCTCCCTTACCCACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572382.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
ENST00000576965.1
CDS-3UTR CCA 90 bp GAGAAGCTTGGGATGGAATGTCCCCTATCCCTCAGAAGACTGGAGGGAAGACGAGGCAGGGTGGTCCCTTaGCTCCCCTTCATCACCCTC +
Preference number: 4 (lower is better)
Translates to: EKLGMECPLSLRRLEGRRGRVVP*LPFITL
Trigger: GAGGGTGATGAAGGGGAGCCAAGGGACCACCCTGCC...TCGTCTTCCCTCCAGTCTTCTGAGGGATAGGGGACATTCCATCCCAAGCTTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572382.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
ENST00000576965.1
CDS-3UTR CCA 90 bp AGGGAGAAGCTTGGGATGGAATGTCCCCTATCCCTCAGAAGACTGGAGGGAAGAGACTGCCTGTGGAGATaGAAGGGGCACTGGTGGCCC +
Preference number: 4 (lower is better)
Translates to: REKLGMECPLSLRRLEGRDCLWR*KGHWWP
Trigger: GGGCCACCAGTGCCCCTTCCATCTCCACAGGCAGTC...TCTTCCCTCCAGTCTTCTGAGGGATAGGGGACATTCCATCCCAAGCTTCTCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000575111.5
CDS-3UTR CCA 90 bp TGGGATGGAATGTCCCCTATCCCTCAGAAGACTGGAGGGAAGACGACGGTCTGTTGGAGGGACTGCCTGTaGAGATGGAAGGGGCACTGG +
Preference number: 4 (lower is better)
Translates to: WDGMSPIPQKTGGKTTVCWRDCL*RWKGHW
Trigger: CCAGTGCCCCTTCCATCTCCACAGGCAGTCCCTCCA...ACAGACCGTCGTCTTCCCTCCAGTCTTCTGAGGGATAGGGGACATTCCATCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000575111.5
CDS-3UTR TCA 90 bp GATGGAATGTCCCCTATCCCTCAGAAGACTGGAGGGAAGACGACGGTCTGTGCACAGCGCAATAAAGACTaGCCCATTGACCGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: DGMSPIPQKTGGKTTVCAQRNKD*PIDRGW
Trigger: CCAGCCCCGGTCAATGGGTCAGTCTTTATTGCGCTG...TGCACAGACCGTCGTCTTCCCTCCAGTCTTCTGAGGGATAGGGGACATTCCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
CDS-3UTR TCA 90 bp TCCCTCAGAAGACTGGAGGGAAGACGACGGTCTGTGCAAATAGGTCACCAGAGGTCCCCAGGACCCCGATaGACAGGCTGCTTGCAAATG +
Preference number: 4 (lower is better)
Translates to: SLRRLEGRRRSVQIGHQRSPGPR*TGCLQM
Trigger: CATTTGCAAGCAGCCTGTTCATCGGGGTCCTGGGGA...CCTCTGGTGACCTATTTGCACAGACCGTCGTCTTCCCTCCAGTCTTCTGAGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572382.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
ENST00000576965.1
CDS-3UTR TCA 90 bp CTTGGGATGGAATGTCCCCTATCCCTCAGAAGACTGGAGGGAAGACGACGGTCTTCCCCAGGACCCCGATaGACAGGCTGCTTGCAAATG +
Preference number: 4 (lower is better)
Translates to: LGMECPLSLRRLEGRRRSSPGPR*TGCLQM
Trigger: CATTTGCAAGCAGCCTGTTCATCGGGGTCCTGGGGA...AGACCGTCGTCTTCCCTCCAGTCTTCTGAGGGATAGGGGACATTCCATCCCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572382.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
ENST00000576965.1
CDS-3UTR TCA 90 bp GAAGCTTGGGATGGAATGTCCCCTATCCCTCAGAAGACTGGAGGGAAGACGACGGCCGCGCGTCACAGGTaGCAGAAAAACTTCGGGAAG +
Preference number: 4 (lower is better)
Translates to: EAWDGMSPIPQKTGGKTTAARHR*QKNFGK
Trigger: CTTCCCGAAGTTTTTCTGTCACCTGTGACGCGCGGC...CGTCGTCTTCCCTCCAGTCTTCTGAGGGATAGGGGACATTCCATCCCAAGCTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000572430.5
CDS-3UTR GCA 90 bp GGTGTGGGTAAGGGAGAAGCTTGGGATGGAATGTCCCCTATCCCTCAGAAGACTGTTCTGCGCCCTCCCTaGCCCTCCTTTAGGATCCCA +
Preference number: 4 (lower is better)
Translates to: GVGKGEAWDGMSPIPQKTVLRPP*PSFRIP
Trigger: TGGGATCCTAAAGGAGGGGCAGGGAGGGCGCAGAAC...AGTCTTCTGAGGGATAGGGGACATTCCATCCCAAGCTTCTCCCTTACCCACACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262482.11
ENST00000575111.5
CDS-3UTR GCA 90 bp TGTCCCCTATCCCTCAGAAGACTGGAGGGAAGACGACGGTCTGTGCAAATAGGTGTGGGGCAATGGGGCTaGAGGCATTGTCTGGGTGAG +
Preference number: 4 (lower is better)
Translates to: CPLSLRRLEGRRRSVQIGVGQWG*RHCLGE
Trigger: CTCACCCAGACAATGCCTGCAGCCCCATTGCCCCAC...ACCTATTTGCACAGACCGTCGTCTTCCCTCCAGTCTTCTGAGGGATAGGGGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
CDS-3UTR GCA 90 bp AGAAGCTTGGGATGGAATGTCCCCTATCCCTCAGAAGACTGGAGGGAAGACGACGTGGGGCAATGGGGCTaGAGGCATTGTCTGGGTGAG +
Preference number: 4 (lower is better)
Translates to: RSLGWNVPYPSEDWREDDVGQWG*RHCLGE
Trigger: CTCACCCAGACAATGCCTGCAGCCCCATTGCCCCAC...GTCGTCTTCCCTCCAGTCTTCTGAGGGATAGGGGACATTCCATCCCAAGCTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
CDS-3UTR GCA 90 bp AGGATAGGTGTGGGTAAGGGAGAAGCTTGGGATGGAATGTCCCCTATCCCTCAGGTGGGGCAATGGGGCTaGAGGCATTGTCTGGGTGAG +
Preference number: 4 (lower is better)
Translates to: RIGVGKGEAWDGMSPIPQVGQWG*RHCLGE
Trigger: CTCACCCAGACAATGCCTGCAGCCCCATTGCCCCAC...CTGAGGGATAGGGGACATTCCATCCCAAGCTTCTCCCTTACCCACACCTATCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
CDS-3UTR GCA 90 bp ATCCCTCAGAAGACTGGAGGGAAGACGACGGTCTGTGCAAATAGGTCACCAGAGGTGGGGCAATGGGGCTaGAGGCATTGTCTGGGTGAG +
Preference number: 4 (lower is better)
Translates to: IPQKTGGKTTVCANRSPEVGQWG*RHCLGE
Trigger: CTCACCCAGACAATGCCTGCAGCCCCATTGCCCCAC...CTCTGGTGACCTATTTGCACAGACCGTCGTCTTCCCTCCAGTCTTCTGAGGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
CDS-3UTR CCA 90 bp GTGTGGGTAAGGGAGAAGCTTGGGATGGAATGTCCCCTATCCCTCAGAAGACTGGGACTTCCTGCTAGGTaGGCCGTGTTCCCAGCCTCT +
Preference number: 4 (lower is better)
Translates to: VWVREKLGMECPLSLRRLGLPAR*AVFPAS
Trigger: AGAGGCTGGGAACACGGCCCACCTAGCAGGAAGTCC...CAGTCTTCTGAGGGATAGGGGACATTCCATCCCAAGCTTCTCCCTTACCCACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
CDS-3UTR CCA 90 bp TGTCCCCTATCCCTCAGAAGACTGGAGGGAAGACGACGGTCTGTGCAAATAGGTGGACTTCCTGCTAGGTaGGCCGTGTTCCCAGCCTCT +
Preference number: 4 (lower is better)
Translates to: CPLSLRRLEGRRRSVQIGGLPAR*AVFPAS
Trigger: AGAGGCTGGGAACACGGCCCACCTAGCAGGAAGTCC...ACCTATTTGCACAGACCGTCGTCTTCCCTCCAGTCTTCTGAGGGATAGGGGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
CDS-3UTR CCA 90 bp AGAAGCTTGGGATGGAATGTCCCCTATCCCTCAGAAGACTGGAGGGAAGACGACGGACTTCCTGCTAGGTaGGCCGTGTTCCCAGCCTCT +
Preference number: 4 (lower is better)
Translates to: RSLGWNVPYPSEDWREDDGLPAR*AVFPAS
Trigger: AGAGGCTGGGAACACGGCCCACCTAGCAGGAAGTCC...GTCGTCTTCCCTCCAGTCTTCTGAGGGATAGGGGACATTCCATCCCAAGCTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
CDS-3UTR CCA 90 bp ATCCCTCAGAAGACTGGAGGGAAGACGACGGTCTGTGCAAATAGGTCACCAGAGGGACTTCCTGCTAGGTaGGCCGTGTTCCCAGCCTCT +
Preference number: 4 (lower is better)
Translates to: IPQKTGGKTTVCANRSPEGLPAR*AVFPAS
Trigger: AGAGGCTGGGAACACGGCCCACCTAGCAGGAAGTCC...CTCTGGTGACCTATTTGCACAGACCGTCGTCTTCCCTCCAGTCTTCTGAGGGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
CDS-3UTR CCA 90 bp CCTATCCCTCAGAAGACTGGAGGGAAGACGACGGTCTGTGCAAATAGGTCACCACGGAGCTCAAGGAGGTaGGACTTCCTGCTAGGTGGG +
Preference number: 4 (lower is better)
Translates to: PIPQKTGGKTTVCANRSPRSSRR*DFLLGG
Trigger: CCCACCTAGCAGGAAGTCCCACCTCCTTGAGCTCCG...TGGTGACCTATTTGCACAGACCGTCGTCTTCCCTCCAGTCTTCTGAGGGATAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
CDS-3UTR CCA 90 bp ATCCCTCAGAAGACTGGAGGGAAGACGACGGTCTGTGCAAATAGGTCACCAGAGCGGAGCTCAAGGAGGTaGGACTTCCTGCTAGGTGGG +
Preference number: 4 (lower is better)
Translates to: IPQKTGGKTTVCANRSPERSSRR*DFLLGG
Trigger: CCCACCTAGCAGGAAGTCCCACCTCCTTGAGCTCCG...CTCTGGTGACCTATTTGCACAGACCGTCGTCTTCCCTCCAGTCTTCTGAGGGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
CDS-3UTR CCA 90 bp GGTAAGGGAGAAGCTTGGGATGGAATGTCCCCTATCCCTCAGAAGACTGGAGGGAAACTTCGGGAAGGGTaGCGGAGCTCAAGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: GKGEAWDGMSPIPQKTGGKLREG*RSSRRW
Trigger: CCACCTCCTTGAGCTCCGCCACCCTTCCCGAAGTTT...CCCTCCAGTCTTCTGAGGGATAGGGGACATTCCATCCCAAGCTTCTCCCTTACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
CDS-3UTR CCA 90 bp CAGAAGACTGGAGGGAAGACGACGGTCTGTGCAAATAGGTCACCAGAGGTGTATCACTTCCCAGCTACATaGGGGCGCCGGGGAAGGAAC +
Preference number: 4 (lower is better)
Translates to: QKTGGKTTVCANRSPEVYHFPAT*GRRGRN
Trigger: GTTCCTTCCCCGGCGCCCCCATGTAGCTGGGAAGTG...ATACACCTCTGGTGACCTATTTGCACAGACCGTCGTCTTCCCTCCAGTCTTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262482.11
ENST00000575111.5
CDS-3UTR CCA 90 bp CCCTTGAGTTTCTTCCTCTTGGTCTTCGTCCCCAGGACCCCGATGAACAGGCTGGCTGCAGGCATTGTCTaGGTGAGCCTCCACAAGGAA +
Preference number: 4 (lower is better)
Translates to: PLSFFLLVFVPRTPMNRLAAGIV*VSLHKE
Trigger: TTCCTTGTGGAGGCTCACCCAGACAATGCCTGCAGC...CAGCCTGTTCATCGGGGTCCTGGGGACGAAGACCAAGAGGAAGAAACTCAAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000575400.5
CDS-3UTR CCA 90 bp GAAGCTTGGGATGGAATGTCCCCTATCCCTCAGAAGACTGGAGGGAAGACGACGGTAAGTCGATTCCGCTaGAGCCGTTTCCGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: EAWDGMSPIPQKTGGKTTVSRFR*SRFRCW
Trigger: CCAGCACCGGAAACGGCTCCAGCGGAATCGACTTAC...CGTCGTCTTCCCTCCAGTCTTCTGAGGGATAGGGGACATTCCATCCCAAGCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572382.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
CDS-3UTR CCA 90 bp TTGGGATGGAATGTCCCCTATCCCTCAGAAGACTGGAGGGAAGACGACGGTCTGCAGGCTGCTTGCAAATaGGGCAGGTCTTCCGGGTCT +
Preference number: 4 (lower is better)
Translates to: LGWNVPYPSEDWREDDGLQAACK*GRSSGS
Trigger: AGACCCGGAAGACCTGCCCCATTTGCAAGCAGCCTG...CAGACCGTCGTCTTCCCTCCAGTCTTCTGAGGGATAGGGGACATTCCATCCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572382.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
ENST00000576965.1
CDS-3UTR CCA 90 bp TCCCTCAGAAGACTGGAGGGAAGACGACGGTCTGTGCAAATAGGTCACCAGAGGCAGGCTGCTTGCAAATaGGGCAGGTCTTCCGGGTCT +
Preference number: 4 (lower is better)
Translates to: SLRRLEGRRRSVQIGHQRQAACK*GRSSGS
Trigger: AGACCCGGAAGACCTGCCCCATTTGCAAGCAGCCTG...CCTCTGGTGACCTATTTGCACAGACCGTCGTCTTCCCTCCAGTCTTCTGAGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572382.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
ENST00000576965.1
CDS-3UTR CCA 90 bp GGTAGGCATGAGCACAGGGGAGTACCCGCAGCTTGTCCCCATCCTCATATTCATCAGGCTGCTTGCAAATaGGGCAGGTCTTCCGGGTCT +
Preference number: 4 (lower is better)
Translates to: GRHEHRGVPAACPHPHIHQAACK*GRSSGS
Trigger: AGACCCGGAAGACCTGCCCCATTTGCAAGCAGCCTG...ATGAATATGAGGATGGGGACAAGCTGCGGGTACTCCCCTGTGCTCATGCCTACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000575400.5
CDS-3UTR TCA 90 bp TGTCCCCTATCCCTCAGAAGACTGGAGGGAAGACGACGGTCTGTGCAAATAGGTCAGCGCAATAAAGACTaGCCCATTGACCGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: CPLSLRRLEGRRRSVQIGQRNKD*PIDRGW
Trigger: CCAGCCCCGGTCAATGGGTCAGTCTTTATTGCGCTG...ACCTATTTGCACAGACCGTCGTCTTCCCTCCAGTCTTCTGAGGGATAGGGGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
CDS-3UTR TCA 90 bp CTATCCCTCAGAAGACTGGAGGGAAGACGACGGTCTGTGCAAATAGGTCACCAGCAGCGCAATAAAGACTaGCCCATTGACCGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: LSLRRLEGRRRSVQIGHQQRNKD*PIDRGW
Trigger: CCAGCCCCGGTCAATGGGTCAGTCTTTATTGCGCTG...CTGGTGACCTATTTGCACAGACCGTCGTCTTCCCTCCAGTCTTCTGAGGGATAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
CDS-3UTR TCA 90 bp AGAAGCTTGGGATGGAATGTCCCCTATCCCTCAGAAGACTGGAGGGAAGACGACTCCCCAGGACCCCGATaGACAGGCTGCTTGCAAATG +
Preference number: 4 (lower is better)
Translates to: RSLGWNVPYPSEDWREDDSPGPR*TGCLQM
Trigger: CATTTGCAAGCAGCCTGTTCATCGGGGTCCTGGGGA...GTCGTCTTCCCTCCAGTCTTCTGAGGGATAGGGGACATTCCATCCCAAGCTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572382.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
ENST00000576965.1
CDS-3UTR TCA 90 bp GTGTGGGTAAGGGAGAAGCTTGGGATGGAATGTCCCCTATCCCTCAGAAGACTGTCCCCAGGACCCCGATaGACAGGCTGCTTGCAAATG +
Preference number: 4 (lower is better)
Translates to: VWVREKLGMECPLSLRRLSPGPR*TGCLQM
Trigger: CATTTGCAAGCAGCCTGTTCATCGGGGTCCTGGGGA...CAGTCTTCTGAGGGATAGGGGACATTCCATCCCAAGCTTCTCCCTTACCCACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572382.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
ENST00000576965.1
CDS-3UTR GCA 90 bp ATCCCTCAGAAGACTGGAGGGAAGACGACGGTCTGTGCAAATAGGTCACCAGAGCAAATCTCGCGAGAGTaGTCACCACCTCTCCCGTCC +
Preference number: 4 (lower is better)
Translates to: IPQKTGGKTTVCANRSPEQISRE*SPPLPS
Trigger: GGACGGGAGAGGTGGTGAGCACTCTCGCGAGATTTG...CTCTGGTGACCTATTTGCACAGACCGTCGTCTTCCCTCCAGTCTTCTGAGGGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262482.11
CDS-3UTR GCA 90 bp CAGAAGACTGGAGGGAAGACGACGGTCTGTGCAAATAGGTCACCAGAGGTGTATGTGGGGCAATGGGGCTaGAGGCATTGTCTGGGTGAG +
Preference number: 4 (lower is better)
Translates to: QKTGGKTTVCANRSPEVYVGQWG*RHCLGE
Trigger: CTCACCCAGACAATGCCTGCAGCCCCATTGCCCCAC...ATACACCTCTGGTGACCTATTTGCACAGACCGTCGTCTTCCCTCCAGTCTTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
CDS-3UTR GCA 90 bp GGGATGGAATGTCCCCTATCCCTCAGAAGACTGGAGGGAAGACGACGGTCTGTGTGGAGCCGTTTCCGGTaGTGGATACAACGAGCTATC +
Preference number: 4 (lower is better)
Translates to: GMECPLSLRRLEGRRRSVWSRFR*WIQRAI
Trigger: GATAGCTCGTTGTATCCAGCACCGGAAACGGCTCCA...CACAGACCGTCGTCTTCCCTCCAGTCTTCTGAGGGATAGGGGACATTCCATCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572382.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
CDS-3UTR CCA 90 bp CAGAAGACTGGAGGGAAGACGACGGTCTGTGCAAATAGGTCACCAGAGGTGTATCGGAGCTCAAGGAGGTaGGACTTCCTGCTAGGTGGG +
Preference number: 4 (lower is better)
Translates to: QKTGGKTTVCANRSPEVYRSSRR*DFLLGG
Trigger: CCCACCTAGCAGGAAGTCCCACCTCCTTGAGCTCCG...ATACACCTCTGGTGACCTATTTGCACAGACCGTCGTCTTCCCTCCAGTCTTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
CDS-3UTR CCA 90 bp TGGAATGTCCCCTATCCCTCAGAAGACTGGAGGGAAGACGACGGTCTGTGCAAAAAACTTCGGGAAGGGTaGCGGAGCTCAAGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: WNVPYPSEDWREDDGLCKKLREG*RSSRRW
Trigger: CCACCTCCTTGAGCTCCGCCACCCTTCCCGAAGTTT...TTTGCACAGACCGTCGTCTTCCCTCCAGTCTTCTGAGGGATAGGGGACATTCCA
56% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
CDS-3UTR CCA 90 bp AGGATAGGTGTGGGTAAGGGAGAAGCTTGGGATGGAATGTCCCCTATCCCTCAGAAACTTCGGGAAGGGTaGCGGAGCTCAAGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: RIGVGKGEAWDGMSPIPQKLREG*RSSRRW
Trigger: CCACCTCCTTGAGCTCCGCCACCCTTCCCGAAGTTT...CTGAGGGATAGGGGACATTCCATCCCAAGCTTCTCCCTTACCCACACCTATCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
CDS-3UTR CCA 90 bp AAGGGAGAAGCTTGGGATGGAATGTCCCCTATCCCTCAGAAGACTGGAGGGAAGAAACTTCGGGAAGGGTaGCGGAGCTCAAGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: KGEAWDGMSPIPQKTGGKKLREG*RSSRRW
Trigger: CCACCTCCTTGAGCTCCGCCACCCTTCCCGAAGTTT...CTTCCCTCCAGTCTTCTGAGGGATAGGGGACATTCCATCCCAAGCTTCTCCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
CDS-3UTR CCA 90 bp TTGGGATGGAATGTCCCCTATCCCTCAGAAGACTGGAGGGAAGACGACGGTCTGTCCATGCTGGCATTGTaGTCCGAGGTCGCTCGAATG +
Preference number: 4 (lower is better)
Translates to: LGWNVPYPSEDWREDDGLSMLAL*SEVARM
Trigger: CATTCGAGCGACCTCGGACCACAATGCCAGCATGGA...CAGACCGTCGTCTTCCCTCCAGTCTTCTGAGGGATAGGGGACATTCCATCCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
CDS-3UTR CCA 90 bp TGGGATGGAATGTCCCCTATCCCTCAGAAGACTGGAGGGAAGACGACGGTCTGTCTGCAAAGTCCATGCTaGCATTGTGGTCCGAGGTCG +
Preference number: 4 (lower is better)
Translates to: WDGMSPIPQKTGGKTTVCLQSPC*HCGPRS
Trigger: CGACCTCGGACCACAATGCCAGCATGGACTTTGCAG...ACAGACCGTCGTCTTCCCTCCAGTCTTCTGAGGGATAGGGGACATTCCATCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
CDS-3UTR CCA 90 bp TTGGGATGGAATGTCCCCTATCCCTCAGAAGACTGGAGGGAAGACGACGGTCTGCTGCAAAGTCCATGCTaGCATTGTGGTCCGAGGTCG +
Preference number: 4 (lower is better)
Translates to: LGWNVPYPSEDWREDDGLLQSPC*HCGPRS
Trigger: CGACCTCGGACCACAATGCCAGCATGGACTTTGCAG...CAGACCGTCGTCTTCCCTCCAGTCTTCTGAGGGATAGGGGACATTCCATCCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
CDS-3UTR CCA 90 bp TCCCTCAGAAGACTGGAGGGAAGACGACGGTCTGTGCAAATAGGTCACCAGAGGCTGCAAAGTCCATGCTaGCATTGTGGTCCGAGGTCG +
Preference number: 4 (lower is better)
Translates to: SLRRLEGRRRSVQIGHQRLQSPC*HCGPRS
Trigger: CGACCTCGGACCACAATGCCAGCATGGACTTTGCAG...CCTCTGGTGACCTATTTGCACAGACCGTCGTCTTCCCTCCAGTCTTCTGAGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
CDS-3UTR CCA 90 bp TGGGATGGAATGTCCCCTATCCCTCAGAAGACTGGAGGGAAGACGACGGTCTGTGCTGCAGGCATTGTCTaGGTGAGCCTCCACAAGGAA +
Preference number: 4 (lower is better)
Translates to: WDGMSPIPQKTGGKTTVCAAGIV*VSLHKE
Trigger: TTCCTTGTGGAGGCTCACCCAGACAATGCCTGCAGC...ACAGACCGTCGTCTTCCCTCCAGTCTTCTGAGGGATAGGGGACATTCCATCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
CDS-3UTR CCA 90 bp TTGGGATGGAATGTCCCCTATCCCTCAGAAGACTGGAGGGAAGACGACGGTCTGGGGGAAGGTATTGTCTaGAACCAGAAGCACCCGAGC +
Preference number: 4 (lower is better)
Translates to: LGWNVPYPSEDWREDDGLGEGIV*NQKHPS
Trigger: GCTCGGGTGCTTCTGGTTCCAGACAATACCTTCCCC...CAGACCGTCGTCTTCCCTCCAGTCTTCTGAGGGATAGGGGACATTCCATCCCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572382.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
CDS-3UTR CCA 90 bp GATGGAATGTCCCCTATCCCTCAGAAGACTGGAGGGAAGACGACGGTCTGTGCAGGGGAAGGTATTGTCTaGAACCAGAAGCACCCGAGC +
Preference number: 4 (lower is better)
Translates to: DGMSPIPQKTGGKTTVCAGEGIV*NQKHPS
Trigger: GCTCGGGTGCTTCTGGTTCCAGACAATACCTTCCCC...TGCACAGACCGTCGTCTTCCCTCCAGTCTTCTGAGGGATAGGGGACATTCCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572382.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
CDS-3UTR CCA 90 bp GGGAGAAGCTTGGGATGGAATGTCCCCTATCCCTCAGAAGACTGGAGGGAAGACGGGGAAGGTATTGTCTaGAACCAGAAGCACCCGAGC +
Preference number: 4 (lower is better)
Translates to: GRSLGWNVPYPSEDWREDGEGIV*NQKHPS
Trigger: GCTCGGGTGCTTCTGGTTCCAGACAATACCTTCCCC...GTCTTCCCTCCAGTCTTCTGAGGGATAGGGGACATTCCATCCCAAGCTTCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572382.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
CDS-3UTR CCA 90 bp TGGAATGTCCCCTATCCCTCAGAAGACTGGAGGGAAGACGACGGTCTGTGCAAAGTAAGTCGATTCCGCTaGAGCCGTTTCCGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: WNVPYPSEDWREDDGLCKVSRFR*SRFRCW
Trigger: CCAGCACCGGAAACGGCTCCAGCGGAATCGACTTAC...TTTGCACAGACCGTCGTCTTCCCTCCAGTCTTCTGAGGGATAGGGGACATTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572382.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
CDS-3UTR CCA 90 bp TGGGTAAGGGAGAAGCTTGGGATGGAATGTCCCCTATCCCTCAGAAGACTGGAGGTAAGTCGATTCCGCTaGAGCCGTTTCCGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: WVREKLGMECPLSLRRLEVSRFR*SRFRCW
Trigger: CCAGCACCGGAAACGGCTCCAGCGGAATCGACTTAC...CTCCAGTCTTCTGAGGGATAGGGGACATTCCATCCCAAGCTTCTCCCTTACCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572382.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
CDS-3UTR CCA 90 bp AGAAGCTTGGGATGGAATGTCCCCTATCCCTCAGAAGACTGGAGGGAAGACGACGTAAGTCGATTCCGCTaGAGCCGTTTCCGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: RSLGWNVPYPSEDWREDDVSRFR*SRFRCW
Trigger: CCAGCACCGGAAACGGCTCCAGCGGAATCGACTTAC...GTCGTCTTCCCTCCAGTCTTCTGAGGGATAGGGGACATTCCATCCCAAGCTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572382.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
CDS-3UTR CCA 90 bp CTATCCCTCAGAAGACTGGAGGGAAGACGACGGTCTGTGCAAATAGGTCACCAGGTAAGTCGATTCCGCTaGAGCCGTTTCCGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: LSLRRLEGRRRSVQIGHQVSRFR*SRFRCW
Trigger: CCAGCACCGGAAACGGCTCCAGCGGAATCGACTTAC...CTGGTGACCTATTTGCACAGACCGTCGTCTTCCCTCCAGTCTTCTGAGGGATAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572382.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
CDS-3UTR CCA 90 bp ATCCCTCAGAAGACTGGAGGGAAGACGACGGTCTGTGCAAATAGGTCACCAGAGGTAAGTCGATTCCGCTaGAGCCGTTTCCGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: IPQKTGGKTTVCANRSPEVSRFR*SRFRCW
Trigger: CCAGCACCGGAAACGGCTCCAGCGGAATCGACTTAC...CTCTGGTGACCTATTTGCACAGACCGTCGTCTTCCCTCCAGTCTTCTGAGGGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572382.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
CDS-3UTR CCA 90 bp GGTGTGGGTAAGGGAGAAGCTTGGGATGGAATGTCCCCTATCCCTCAGAAGACTCAGGCTGCTTGCAAATaGGGCAGGTCTTCCGGGTCT +
Preference number: 4 (lower is better)
Translates to: GVGKGEAWDGMSPIPQKTQAACK*GRSSGS
Trigger: AGACCCGGAAGACCTGCCCCATTTGCAAGCAGCCTG...AGTCTTCTGAGGGATAGGGGACATTCCATCCCAAGCTTCTCCCTTACCCACACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572382.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
ENST00000576965.1
CDS-3UTR CCA 90 bp GTGTGGGTAAGGGAGAAGCTTGGGATGGAATGTCCCCTATCCCTCAGAAGACTGCAGGCTGCTTGCAAATaGGGCAGGTCTTCCGGGTCT +
Preference number: 4 (lower is better)
Translates to: VWVREKLGMECPLSLRRLQAACK*GRSSGS
Trigger: AGACCCGGAAGACCTGCCCCATTTGCAAGCAGCCTG...CAGTCTTCTGAGGGATAGGGGACATTCCATCCCAAGCTTCTCCCTTACCCACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572382.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
ENST00000576965.1
CDS-3UTR CCA 90 bp AGAAGCTTGGGATGGAATGTCCCCTATCCCTCAGAAGACTGGAGGGAAGACGACCAGGCTGCTTGCAAATaGGGCAGGTCTTCCGGGTCT +
Preference number: 4 (lower is better)
Translates to: RSLGWNVPYPSEDWREDDQAACK*GRSSGS
Trigger: AGACCCGGAAGACCTGCCCCATTTGCAAGCAGCCTG...GTCGTCTTCCCTCCAGTCTTCTGAGGGATAGGGGACATTCCATCCCAAGCTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572382.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
ENST00000576965.1
CDS-3UTR CCA 90 bp GGTGTGGGTAAGGGAGAAGCTTGGGATGGAATGTCCCCTATCCCTCAGAAGACTAGATGGAAGGGGCACTaGTGGCCCAGAAGACGACCT +
Preference number: 4 (lower is better)
Translates to: GVGKGEAWDGMSPIPQKTRWKGH*WPRRRP
Trigger: AGGTCGTCTTCTGGGCCACCAGTGCCCCTTCCATCT...AGTCTTCTGAGGGATAGGGGACATTCCATCCCAAGCTTCTCCCTTACCCACACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000575111.5
CDS-3UTR TCA 90 bp CCCTTGAGTTTCTTCCTCTTGGTCTTCGTCCCCAGGACCCCGATGAACAGGCTGGGGCATTTAGGACCTTaGGGTCAAAGTTGCAGTCGA +
Preference number: 4 (lower is better)
Translates to: PLSFFLLVFVPRTPMNRLGHLGP*GQSCSR
Trigger: TCGACTGCAACTTTGACCTCAAGGTCCTAAATGCCC...CAGCCTGTTCATCGGGGTCCTGGGGACGAAGACCAAGAGGAAGAAACTCAAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000575400.5
CDS-3UTR TCA 90 bp CAGAAGACTGGAGGGAAGACGACGGTCTGTGCAAATAGGTCACCAGAGGTGTATTCCCCAGGACCCCGATaGACAGGCTGCTTGCAAATG +
Preference number: 4 (lower is better)
Translates to: QKTGGKTTVCANRSPEVYSPGPR*TGCLQM
Trigger: CATTTGCAAGCAGCCTGTTCATCGGGGTCCTGGGGA...ATACACCTCTGGTGACCTATTTGCACAGACCGTCGTCTTCCCTCCAGTCTTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572382.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
ENST00000576965.1
CDS-3UTR GCA 90 bp GATGGAATGTCCCCTATCCCTCAGAAGACTGGAGGGAAGACGACGGTCTGTGCATGGAGCCGTTTCCGGTaGTGGATACAACGAGCTATC +
Preference number: 4 (lower is better)
Translates to: DGMSPIPQKTGGKTTVCAWSRFR*WIQRAI
Trigger: GATAGCTCGTTGTATCCAGCACCGGAAACGGCTCCA...TGCACAGACCGTCGTCTTCCCTCCAGTCTTCTGAGGGATAGGGGACATTCCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572382.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
CDS-3UTR GCA 90 bp GATGGAATGTCCCCTATCCCTCAGAAGACTGGAGGGAAGACGACGGTCTGTGCAGATGAACAGGCTGCTTaGAAATGGGGCAGGTCTTCC +
Preference number: 4 (lower is better)
Translates to: DGMSPIPQKTGGKTTVCADEQAA*KWGRSS
Trigger: GGAAGACCTGCCCCATTTGCAAGCAGCCTGTTCATC...TGCACAGACCGTCGTCTTCCCTCCAGTCTTCTGAGGGATAGGGGACATTCCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572382.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
ENST00000576965.1
CDS-3UTR GCA 90 bp GGTAGGCATGAGCACAGGGGAGTACCCGCAGCTTGTCCCCATCCTCATATTCATGATGAACAGGCTGCTTaGAAATGGGGCAGGTCTTCC +
Preference number: 4 (lower is better)
Translates to: GRHEHRGVPAACPHPHIHDEQAA*KWGRSS
Trigger: GGAAGACCTGCCCCATTTGCAAGCAGCCTGTTCATC...ATGAATATGAGGATGGGGACAAGCTGCGGGTACTCCCCTGTGCTCATGCCTACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000575400.5
CDS-3UTR GCA 90 bp GGTAAGGGAGAAGCTTGGGATGGAATGTCCCCTATCCCTCAGAAGACTGGAGGGGATGAACAGGCTGCTTaGAAATGGGGCAGGTCTTCC +
Preference number: 4 (lower is better)
Translates to: GKGEAWDGMSPIPQKTGGDEQAA*KWGRSS
Trigger: GGAAGACCTGCCCCATTTGCAAGCAGCCTGTTCATC...CCCTCCAGTCTTCTGAGGGATAGGGGACATTCCATCCCAAGCTTCTCCCTTACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572382.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
ENST00000576965.1
CDS-3UTR CCA 90 bp ATCCCTCAGAAGACTGGAGGGAAGACGACGGTCTGTGCAAATAGGTCACCAGAGTCCATGCTGGCATTGTaGTCCGAGGTCGCTCGAATG +
Preference number: 4 (lower is better)
Translates to: IPQKTGGKTTVCANRSPESMLAL*SEVARM
Trigger: CATTCGAGCGACCTCGGACCACAATGCCAGCATGGA...CTCTGGTGACCTATTTGCACAGACCGTCGTCTTCCCTCCAGTCTTCTGAGGGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
CDS-3UTR CCA 90 bp AGGATAGGTGTGGGTAAGGGAGAAGCTTGGGATGGAATGTCCCCTATCCCTCAGTCCATGCTGGCATTGTaGTCCGAGGTCGCTCGAATG +
Preference number: 4 (lower is better)
Translates to: RIGVGKGEAWDGMSPIPQSMLAL*SEVARM
Trigger: CATTCGAGCGACCTCGGACCACAATGCCAGCATGGA...CTGAGGGATAGGGGACATTCCATCCCAAGCTTCTCCCTTACCCACACCTATCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
CDS-3UTR CCA 90 bp AGGGAGAAGCTTGGGATGGAATGTCCCCTATCCCTCAGAAGACTGGAGGGAAGATCCATGCTGGCATTGTaGTCCGAGGTCGCTCGAATG +
Preference number: 4 (lower is better)
Translates to: REKLGMECPLSLRRLEGRSMLAL*SEVARM
Trigger: CATTCGAGCGACCTCGGACCACAATGCCAGCATGGA...TCTTCCCTCCAGTCTTCTGAGGGATAGGGGACATTCCATCCCAAGCTTCTCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
CDS-3UTR CCA 90 bp TGGAATGTCCCCTATCCCTCAGAAGACTGGAGGGAAGACGACGGTCTGTGCAAACTGCAAAGTCCATGCTaGCATTGTGGTCCGAGGTCG +
Preference number: 4 (lower is better)
Translates to: WNVPYPSEDWREDDGLCKLQSPC*HCGPRS
Trigger: CGACCTCGGACCACAATGCCAGCATGGACTTTGCAG...TTTGCACAGACCGTCGTCTTCCCTCCAGTCTTCTGAGGGATAGGGGACATTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
CDS-3UTR CCA 90 bp CTATCCCTCAGAAGACTGGAGGGAAGACGACGGTCTGTGCAAATAGGTCACCAGCTGCAAAGTCCATGCTaGCATTGTGGTCCGAGGTCG +
Preference number: 4 (lower is better)
Translates to: LSLRRLEGRRRSVQIGHQLQSPC*HCGPRS
Trigger: CGACCTCGGACCACAATGCCAGCATGGACTTTGCAG...CTGGTGACCTATTTGCACAGACCGTCGTCTTCCCTCCAGTCTTCTGAGGGATAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
CDS-3UTR CCA 90 bp GGTGTGGGTAAGGGAGAAGCTTGGGATGGAATGTCCCCTATCCCTCAGAAGACTGCTGCAGGCATTGTCTaGGTGAGCCTCCACAAGGAA +
Preference number: 4 (lower is better)
Translates to: GVGKGEAWDGMSPIPQKTAAGIV*VSLHKE
Trigger: TTCCTTGTGGAGGCTCACCCAGACAATGCCTGCAGC...AGTCTTCTGAGGGATAGGGGACATTCCATCCCAAGCTTCTCCCTTACCCACACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
CDS-3UTR CCA 90 bp TGGGTAAGGGAGAAGCTTGGGATGGAATGTCCCCTATCCCTCAGAAGACTGGAGGCTGCAGGCATTGTCTaGGTGAGCCTCCACAAGGAA +
Preference number: 4 (lower is better)
Translates to: WVREKLGMECPLSLRRLEAAGIV*VSLHKE
Trigger: TTCCTTGTGGAGGCTCACCCAGACAATGCCTGCAGC...CTCCAGTCTTCTGAGGGATAGGGGACATTCCATCCCAAGCTTCTCCCTTACCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
CDS-3UTR CCA 90 bp AGGATAGGTGTGGGTAAGGGAGAAGCTTGGGATGGAATGTCCCCTATCCCTCAGGGGGAAGGTATTGTCTaGAACCAGAAGCACCCGAGC +
Preference number: 4 (lower is better)
Translates to: RIGVGKGEAWDGMSPIPQGEGIV*NQKHPS
Trigger: GCTCGGGTGCTTCTGGTTCCAGACAATACCTTCCCC...CTGAGGGATAGGGGACATTCCATCCCAAGCTTCTCCCTTACCCACACCTATCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572382.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
CDS-3UTR CCA 90 bp AAGGGAGAAGCTTGGGATGGAATGTCCCCTATCCCTCAGAAGACTGGAGGGAAGGGGGAAGGTATTGTCTaGAACCAGAAGCACCCGAGC +
Preference number: 4 (lower is better)
Translates to: KGEAWDGMSPIPQKTGGKGEGIV*NQKHPS
Trigger: GCTCGGGTGCTTCTGGTTCCAGACAATACCTTCCCC...CTTCCCTCCAGTCTTCTGAGGGATAGGGGACATTCCATCCCAAGCTTCTCCCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572382.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
CDS-3UTR CCA 90 bp GCTTGGGATGGAATGTCCCCTATCCCTCAGAAGACTGGAGGGAAGACGACGGTCTCATTACTGCTCCCATaGCCAAAACCAGCAGTCCCA +
Preference number: 4 (lower is better)
Translates to: AWDGMSPIPQKTGGKTTVSLLLP*PKPAVP
Trigger: TGGGACTGCTGGTTTTGGCCATGGGAGCAGTAATGA...GACCGTCGTCTTCCCTCCAGTCTTCTGAGGGATAGGGGACATTCCATCCCAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572382.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
CDS-3UTR CCA 90 bp GCTTGGGATGGAATGTCCCCTATCCCTCAGAAGACTGGAGGGAAGACGACGGTCCCAGAGGTGTATGTGTaGGGGGTTATTAGACCAGGA +
Preference number: 4 (lower is better)
Translates to: AWDGMSPIPQKTGGKTTVPEVYV*GVIRPG
Trigger: TCCTGGTCTAATAACCCCCCACACATACACCTCTGG...GACCGTCGTCTTCCCTCCAGTCTTCTGAGGGATAGGGGACATTCCATCCCAAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572382.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
ENST00000576965.1
CDS-3UTR CCA 90 bp TCCCTCAGAAGACTGGAGGGAAGACGACGGTCTGTGCAAATAGGTCACCAGAGGTATCCCTCAGAAGACTaGAGGGAAGACGACGGTCTG +
Preference number: 4 (lower is better)
Translates to: SLRRLEGRRRSVQIGHQRYPSED*REDDGL
Trigger: CAGACCGTCGTCTTCCCTCCAGTCTTCTGAGGGATA...CCTCTGGTGACCTATTTGCACAGACCGTCGTCTTCCCTCCAGTCTTCTGAGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572382.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
ENST00000576965.1
CDS-3UTR CCA 90 bp GAAGCTTGGGATGGAATGTCCCCTATCCCTCAGAAGACTGGAGGGAAGACGACGTATCCCTCAGAAGACTaGAGGGAAGACGACGGTCTG +
Preference number: 4 (lower is better)
Translates to: EAWDGMSPIPQKTGGKTTYPSED*REDDGL
Trigger: CAGACCGTCGTCTTCCCTCCAGTCTTCTGAGGGATA...CGTCGTCTTCCCTCCAGTCTTCTGAGGGATAGGGGACATTCCATCCCAAGCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572382.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
ENST00000576965.1
CDS-3UTR CCA 90 bp GCTTGGGATGGAATGTCCCCTATCCCTCAGAAGACTGGAGGGAAGACGACGGTCGGTAAGGGAGAAGCTTaGGATGGAATGTCCCCTATC +
Preference number: 4 (lower is better)
Translates to: AWDGMSPIPQKTGGKTTVGKGEA*DGMSPI
Trigger: GATAGGGGACATTCCATCCCAAGCTTCTCCCTTACC...GACCGTCGTCTTCCCTCCAGTCTTCTGAGGGATAGGGGACATTCCATCCCAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572382.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
ENST00000576965.1
CDS-3UTR CCA 90 bp GGTGTGGGTAAGGGAGAAGCTTGGGATGGAATGTCCCCTATCCCTCAGAAGACTTGGAAGGGGCACTGGTaGCCCAGAAGACGACCTAAT +
Preference number: 4 (lower is better)
Translates to: GVGKGEAWDGMSPIPQKTWKGHW*PRRRPN
Trigger: ATTAGGTCGTCTTCTGGGCCACCAGTGCCCCTTCCA...AGTCTTCTGAGGGATAGGGGACATTCCATCCCAAGCTTCTCCCTTACCCACACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000575111.5
CDS-3UTR TCA 90 bp TCCCTCAGAAGACTGGAGGGAAGACGACGGTCTGTGCAAATAGGTCACCAGAGGATTGGATGCTTGAGATaGAGGACTTCCGGTCCTCTC +
Preference number: 4 (lower is better)
Translates to: SLRRLEGRRRSVQIGHQRIGCLR*RTSGPL
Trigger: GAGAGGACCGGAAGTCCTTCATCTCAAGCATCCAAT...CCTCTGGTGACCTATTTGCACAGACCGTCGTCTTCCCTCCAGTCTTCTGAGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262482.11
CDS-3UTR TCA 90 bp GGGAGAAGCTTGGGATGGAATGTCCCCTATCCCTCAGAAGACTGGAGGGAAGACTCAGCATTGGATGCTTaGGATGAAGGACTTCCGGTC +
Preference number: 4 (lower is better)
Translates to: GRSLGWNVPYPSEDWREDSALDA*DEGLPV
Trigger: GACCGGAAGTCCTTCATCTCAAGCATCCAATGCTGA...GTCTTCCCTCCAGTCTTCTGAGGGATAGGGGACATTCCATCCCAAGCTTCTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
CDS-3UTR TCA 90 bp TTGGGATGGAATGTCCCCTATCCCTCAGAAGACTGGAGGGAAGACGACGGTCTGGGGCATTTAGGACCTTaGGGTCAAAGTTGCAGTCGA +
Preference number: 4 (lower is better)
Translates to: LGWNVPYPSEDWREDDGLGHLGP*GQSCSR
Trigger: TCGACTGCAACTTTGACCTCAAGGTCCTAAATGCCC...CAGACCGTCGTCTTCCCTCCAGTCTTCTGAGGGATAGGGGACATTCCATCCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
CDS-3UTR TCA 90 bp CCTATCCCTCAGAAGACTGGAGGGAAGACGACGGTCTGTGCAAATAGGTCACCACAGTGGGGGATCTGTTaGAGGCCCAGGAAAAACAAG +
Preference number: 4 (lower is better)
Translates to: PIPQKTGGKTTVCANRSPQWGIC*RPRKNK
Trigger: CTTGTTTTTCCTGGGCCTTCAACAGATCCCCCACTG...TGGTGACCTATTTGCACAGACCGTCGTCTTCCCTCCAGTCTTCTGAGGGATAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572382.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
ENST00000576965.1
CDS-3UTR TCA 90 bp AAGGGAGAAGCTTGGGATGGAATGTCCCCTATCCCTCAGAAGACTGGAGGGAAGCAGTGGGGGATCTGTTaGAGGCCCAGGAAAAACAAG +
Preference number: 4 (lower is better)
Translates to: KGEAWDGMSPIPQKTGGKQWGIC*RPRKNK
Trigger: CTTGTTTTTCCTGGGCCTTCAACAGATCCCCCACTG...CTTCCCTCCAGTCTTCTGAGGGATAGGGGACATTCCATCCCAAGCTTCTCCCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572382.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
ENST00000576965.1
CDS-3UTR TCA 90 bp GGTGTGGGTAAGGGAGAAGCTTGGGATGGAATGTCCCCTATCCCTCAGAAGACTCAGTGGGGGATCTGTTaGAGGCCCAGGAAAAACAAG +
Preference number: 4 (lower is better)
Translates to: GVGKGEAWDGMSPIPQKTQWGIC*RPRKNK
Trigger: CTTGTTTTTCCTGGGCCTTCAACAGATCCCCCACTG...AGTCTTCTGAGGGATAGGGGACATTCCATCCCAAGCTTCTCCCTTACCCACACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572382.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
ENST00000576965.1
CDS-3UTR TCA 90 bp GGGATGGAATGTCCCCTATCCCTCAGAAGACTGGAGGGAAGACGACGGTCTGTGGCGATTCTAATTCGGTaGAAACAGCGCCTTTCCTCT +
Preference number: 4 (lower is better)
Translates to: GMECPLSLRRLEGRRRSVAILIR*KQRLSS
Trigger: AGAGGAAAGGCGCTGTTTTCACCGAATTAGAATCGC...CACAGACCGTCGTCTTCCCTCCAGTCTTCTGAGGGATAGGGGACATTCCATCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571816.5
ENST00000572430.5
CDS-3UTR GCA 90 bp CAGAAGACTGGAGGGAAGACGACGGTCTGTGCAAATAGGTCACCAGAGGTGTATGGTCTGCAAAGTCCATaGTGGCATTGTGGTCCGAGG +
Preference number: 4 (lower is better)
Translates to: QKTGGKTTVCANRSPEVYGLQSP*WHCGPR
Trigger: CCTCGGACCACAATGCCAGCATGGACTTTGCAGACC...ATACACCTCTGGTGACCTATTTGCACAGACCGTCGTCTTCCCTCCAGTCTTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
CDS-3UTR GCA 90 bp GCTTGGGATGGAATGTCCCCTATCCCTCAGAAGACTGGAGGGAAGACGACGGTCGGGATCCAGATCTGCTaGTGGATTTCCTCACTATTC +
Preference number: 4 (lower is better)
Translates to: AWDGMSPIPQKTGGKTTVGIQIC*WISSLF
Trigger: GAATAGTGAGGAAATCCAGCAGCAGATCTGGATCCC...GACCGTCGTCTTCCCTCCAGTCTTCTGAGGGATAGGGGACATTCCATCCCAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572382.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
CDS-3UTR GCA 90 bp GGGAGAAGCTTGGGATGGAATGTCCCCTATCCCTCAGAAGACTGGAGGGAAGACGACGGGATCCAGATCTaGTGCTGGATTTCCTCACTA +
Preference number: 4 (lower is better)
Translates to: GRSLGWNVPYPSEDWREDDGIQI*CWISSL
Trigger: TAGTGAGGAAATCCAGCAGCAGATCTGGATCCCGTC...GTCTTCCCTCCAGTCTTCTGAGGGATAGGGGACATTCCATCCCAAGCTTCTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572382.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
CDS-3UTR GCA 90 bp GGGATGGAATGTCCCCTATCCCTCAGAAGACTGGAGGGAAGACGACGGTCTGTGACGAGCTATCATTACTaGTCCCATGGCCAAAACCAG +
Preference number: 4 (lower is better)
Translates to: GMECPLSLRRLEGRRRSVTSYHY*SHGQNQ
Trigger: CTGGTTTTGGCCATGGGAGCAGTAATGATAGCTCGT...CACAGACCGTCGTCTTCCCTCCAGTCTTCTGAGGGATAGGGGACATTCCATCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572382.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
CDS-3UTR GCA 90 bp AGGGAGAAGCTTGGGATGGAATGTCCCCTATCCCTCAGAAGACTGGAGGGAAGATGGAGCCGTTTCCGGTaGTGGATACAACGAGCTATC +
Preference number: 4 (lower is better)
Translates to: REKLGMECPLSLRRLEGRWSRFR*WIQRAI
Trigger: GATAGCTCGTTGTATCCAGCACCGGAAACGGCTCCA...TCTTCCCTCCAGTCTTCTGAGGGATAGGGGACATTCCATCCCAAGCTTCTCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572382.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
CDS-3UTR GCA 90 bp TGGGTAAGGGAGAAGCTTGGGATGGAATGTCCCCTATCCCTCAGAAGACTGGAGTGGAGCCGTTTCCGGTaGTGGATACAACGAGCTATC +
Preference number: 4 (lower is better)
Translates to: WVREKLGMECPLSLRRLEWSRFR*WIQRAI
Trigger: GATAGCTCGTTGTATCCAGCACCGGAAACGGCTCCA...CTCCAGTCTTCTGAGGGATAGGGGACATTCCATCCCAAGCTTCTCCCTTACCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572382.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
CDS-3UTR GCA 90 bp AGGATAGGTGTGGGTAAGGGAGAAGCTTGGGATGGAATGTCCCCTATCCCTCAGGATGAACAGGCTGCTTaGAAATGGGGCAGGTCTTCC +
Preference number: 4 (lower is better)
Translates to: RIGVGKGEAWDGMSPIPQDEQAA*KWGRSS
Trigger: GGAAGACCTGCCCCATTTGCAAGCAGCCTGTTCATC...CTGAGGGATAGGGGACATTCCATCCCAAGCTTCTCCCTTACCCACACCTATCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572382.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
ENST00000576965.1
CDS-3UTR GCA 90 bp GTGTGGGTAAGGGAGAAGCTTGGGATGGAATGTCCCCTATCCCTCAGAAGACTGGATGAACAGGCTGCTTaGAAATGGGGCAGGTCTTCC +
Preference number: 4 (lower is better)
Translates to: VWVREKLGMECPLSLRRLDEQAA*KWGRSS
Trigger: GGAAGACCTGCCCCATTTGCAAGCAGCCTGTTCATC...CAGTCTTCTGAGGGATAGGGGACATTCCATCCCAAGCTTCTCCCTTACCCACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572382.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
ENST00000576965.1
CDS-3UTR CCA 90 bp CTCAAAAGGATAGGTGTGGGTAAGGGAGAAGCTTGGGATGGAATGTCCCCTATCAAACTTCGGGAAGGGTaGCGGAGCTCAAGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: LKRIGVGKGEAWDGMSPIKLREG*RSSRRW
Trigger: CCACCTCCTTGAGCTCCGCCACCCTTCCCGAAGTTT...GATAGGGGACATTCCATCCCAAGCTTCTCCCTTACCCACACCTATCCTTTTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
CDS-3UTR CCA 90 bp ATAGGTGTGGGTAAGGGAGAAGCTTGGGATGGAATGTCCCCTATCCCTCAGAAGTCCATGCTGGCATTGTaGTCCGAGGTCGCTCGAATG +
Preference number: 4 (lower is better)
Translates to: IGVGKGEAWDGMSPIPQKSMLAL*SEVARM
Trigger: CATTCGAGCGACCTCGGACCACAATGCCAGCATGGA...CTTCTGAGGGATAGGGGACATTCCATCCCAAGCTTCTCCCTTACCCACACCTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
CDS-3UTR CCA 90 bp TCCCTCAGAAGACTGGAGGGAAGACGACGGTCTGTGCAAATAGGTCACCAGAGGCCATATCCAGCCTTCTaGGCATTTAGGACCTTGAGG +
Preference number: 4 (lower is better)
Translates to: SLRRLEGRRRSVQIGHQRPYPAF*AFRTLR
Trigger: CCTCAAGGTCCTAAATGCCCAGAAGGCTGGATATGG...CCTCTGGTGACCTATTTGCACAGACCGTCGTCTTCCCTCCAGTCTTCTGAGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
CDS-3UTR CCA 90 bp TTGGGATGGAATGTCCCCTATCCCTCAGAAGACTGGAGGGAAGACGACGGTCTGCCATATCCAGCCTTCTaGGCATTTAGGACCTTGAGG +
Preference number: 4 (lower is better)
Translates to: LGWNVPYPSEDWREDDGLPYPAF*AFRTLR
Trigger: CCTCAAGGTCCTAAATGCCCAGAAGGCTGGATATGG...CAGACCGTCGTCTTCCCTCCAGTCTTCTGAGGGATAGGGGACATTCCATCCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
CDS-3UTR CCA 90 bp GAAGCTTGGGATGGAATGTCCCCTATCCCTCAGAAGACTGGAGGGAAGACGACGTCATTACTGCTCCCATaGCCAAAACCAGCAGTCCCA +
Preference number: 4 (lower is better)
Translates to: EAWDGMSPIPQKTGGKTTSLLLP*PKPAVP
Trigger: TGGGACTGCTGGTTTTGGCCATGGGAGCAGTAATGA...CGTCGTCTTCCCTCCAGTCTTCTGAGGGATAGGGGACATTCCATCCCAAGCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572382.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
CDS-3UTR CCA 90 bp GGTAAGGGAGAAGCTTGGGATGGAATGTCCCCTATCCCTCAGAAGACTGGAGGGTCATTACTGCTCCCATaGCCAAAACCAGCAGTCCCA +
Preference number: 4 (lower is better)
Translates to: GKGEAWDGMSPIPQKTGGSLLLP*PKPAVP
Trigger: TGGGACTGCTGGTTTTGGCCATGGGAGCAGTAATGA...CCCTCCAGTCTTCTGAGGGATAGGGGACATTCCATCCCAAGCTTCTCCCTTACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572382.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
CDS-3UTR CCA 90 bp GGGATGGAATGTCCCCTATCCCTCAGAAGACTGGAGGGAAGACGACGGTCTGTGAGCCGTTTCCGGTGCTaGATACAACGAGCTATCATT +
Preference number: 4 (lower is better)
Translates to: GMECPLSLRRLEGRRRSVSRFRC*IQRAII
Trigger: AATGATAGCTCGTTGTATCCAGCACCGGAAACGGCT...CACAGACCGTCGTCTTCCCTCCAGTCTTCTGAGGGATAGGGGACATTCCATCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572382.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
CDS-3UTR CCA 90 bp AAAAGGATAGGTGTGGGTAAGGGAGAAGCTTGGGATGGAATGTCCCCTATCCCTCAGGCTGCTTGCAAATaGGGCAGGTCTTCCGGGTCT +
Preference number: 4 (lower is better)
Translates to: KRIGVGKGEAWDGMSPIPQAACK*GRSSGS
Trigger: AGACCCGGAAGACCTGCCCCATTTGCAAGCAGCCTG...AGGGATAGGGGACATTCCATCCCAAGCTTCTCCCTTACCCACACCTATCCTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572382.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
ENST00000576965.1
CDS-3UTR CCA 90 bp TGGGATGGAATGTCCCCTATCCCTCAGAAGACTGGAGGGAAGACGACGGTCTGTCCAGAGGTGTATGTGTaGGGGGTTATTAGACCAGGA +
Preference number: 4 (lower is better)
Translates to: WDGMSPIPQKTGGKTTVCPEVYV*GVIRPG
Trigger: TCCTGGTCTAATAACCCCCCACACATACACCTCTGG...ACAGACCGTCGTCTTCCCTCCAGTCTTCTGAGGGATAGGGGACATTCCATCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572382.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
ENST00000576965.1
CDS-3UTR CCA 90 bp GAAGCTTGGGATGGAATGTCCCCTATCCCTCAGAAGACTGGAGGGAAGACGACGCCAGAGGTGTATGTGTaGGGGGTTATTAGACCAGGA +
Preference number: 4 (lower is better)
Translates to: EAWDGMSPIPQKTGGKTTPEVYV*GVIRPG
Trigger: TCCTGGTCTAATAACCCCCCACACATACACCTCTGG...CGTCGTCTTCCCTCCAGTCTTCTGAGGGATAGGGGACATTCCATCCCAAGCTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572382.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
ENST00000576965.1
CDS-3UTR CCA 90 bp AGGGAGAAGCTTGGGATGGAATGTCCCCTATCCCTCAGAAGACTGGAGGGAAGATATCCCTCAGAAGACTaGAGGGAAGACGACGGTCTG +
Preference number: 4 (lower is better)
Translates to: REKLGMECPLSLRRLEGRYPSED*REDDGL
Trigger: CAGACCGTCGTCTTCCCTCCAGTCTTCTGAGGGATA...TCTTCCCTCCAGTCTTCTGAGGGATAGGGGACATTCCATCCCAAGCTTCTCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572382.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
ENST00000576965.1
CDS-3UTR CCA 90 bp CTATCCCTCAGAAGACTGGAGGGAAGACGACGGTCTGTGCAAATAGGTCACCAGTATCCCTCAGAAGACTaGAGGGAAGACGACGGTCTG +
Preference number: 4 (lower is better)
Translates to: LSLRRLEGRRRSVQIGHQYPSED*REDDGL
Trigger: CAGACCGTCGTCTTCCCTCCAGTCTTCTGAGGGATA...CTGGTGACCTATTTGCACAGACCGTCGTCTTCCCTCCAGTCTTCTGAGGGATAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572382.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
ENST00000576965.1
CDS-3UTR CCA 90 bp GGTGTGGGTAAGGGAGAAGCTTGGGATGGAATGTCCCCTATCCCTCAGAAGACTTATCCCTCAGAAGACTaGAGGGAAGACGACGGTCTG +
Preference number: 4 (lower is better)
Translates to: GVGKGEAWDGMSPIPQKTYPSED*REDDGL
Trigger: CAGACCGTCGTCTTCCCTCCAGTCTTCTGAGGGATA...AGTCTTCTGAGGGATAGGGGACATTCCATCCCAAGCTTCTCCCTTACCCACACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572382.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
ENST00000576965.1
CDS-3UTR CCA 90 bp TGTCCCCTATCCCTCAGAAGACTGGAGGGAAGACGACGGTCTGTGCAAATAGGTTATCCCTCAGAAGACTaGAGGGAAGACGACGGTCTG +
Preference number: 4 (lower is better)
Translates to: CPLSLRRLEGRRRSVQIGYPSED*REDDGL
Trigger: CAGACCGTCGTCTTCCCTCCAGTCTTCTGAGGGATA...ACCTATTTGCACAGACCGTCGTCTTCCCTCCAGTCTTCTGAGGGATAGGGGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572382.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
ENST00000576965.1
CDS-3UTR CCA 90 bp GAAGCTTGGGATGGAATGTCCCCTATCCCTCAGAAGACTGGAGGGAAGACGACGGGTAAGGGAGAAGCTTaGGATGGAATGTCCCCTATC +
Preference number: 4 (lower is better)
Translates to: EAWDGMSPIPQKTGGKTTGKGEA*DGMSPI
Trigger: GATAGGGGACATTCCATCCCAAGCTTCTCCCTTACC...CGTCGTCTTCCCTCCAGTCTTCTGAGGGATAGGGGACATTCCATCCCAAGCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572382.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
ENST00000576965.1
CDS-3UTR CCA 90 bp ATGAGCACAGGGGAGTACCCGCAGCTTGTCCCCATCCTCATATTCATCCAGGCAGCACAGACATCATACTaGTCTCCCCTTCTCGTAGAC +
Preference number: 4 (lower is better)
Translates to: MSTGEYPQLVPILIFIQAAQTSY*SPLLVD
Trigger: GTCTACGAGAAGGGGAGACCAGTATGATGTCTGTGC...TGCCTGGATGAATATGAGGATGGGGACAAGCTGCGGGTACTCCCCTGTGCTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000575400.5
CDS-3UTR TCA 90 bp CTATCCCTCAGAAGACTGGAGGGAAGACGACGGTCTGTGCAAATAGGTCACCAGTCAGCATTGGATGCTTaGGATGAAGGACTTCCGGTC +
Preference number: 4 (lower is better)
Translates to: LSLRRLEGRRRSVQIGHQSALDA*DEGLPV
Trigger: GACCGGAAGTCCTTCATCTCAAGCATCCAATGCTGA...CTGGTGACCTATTTGCACAGACCGTCGTCTTCCCTCCAGTCTTCTGAGGGATAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
CDS-3UTR TCA 90 bp AGGGAGAAGCTTGGGATGGAATGTCCCCTATCCCTCAGAAGACTGGAGGGAAGATCAGCATTGGATGCTTaGGATGAAGGACTTCCGGTC +
Preference number: 4 (lower is better)
Translates to: REKLGMECPLSLRRLEGRSALDA*DEGLPV
Trigger: GACCGGAAGTCCTTCATCTCAAGCATCCAATGCTGA...TCTTCCCTCCAGTCTTCTGAGGGATAGGGGACATTCCATCCCAAGCTTCTCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
CDS-3UTR TCA 90 bp GAGAAGCTTGGGATGGAATGTCCCCTATCCCTCAGAAGACTGGAGGGAAGACGATCAGCATTGGATGCTTaGGATGAAGGACTTCCGGTC +
Preference number: 4 (lower is better)
Translates to: EKLGMECPLSLRRLEGRRSALDA*DEGLPV
Trigger: GACCGGAAGTCCTTCATCTCAAGCATCCAATGCTGA...TCGTCTTCCCTCCAGTCTTCTGAGGGATAGGGGACATTCCATCCCAAGCTTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
CDS-3UTR TCA 90 bp CTATCCCTCAGAAGACTGGAGGGAAGACGACGGTCTGTGCAAATAGGTCACCAGGGGCATTTAGGACCTTaGGGTCAAAGTTGCAGTCGA +
Preference number: 4 (lower is better)
Translates to: LSLRRLEGRRRSVQIGHQGHLGP*GQSCSR
Trigger: TCGACTGCAACTTTGACCTCAAGGTCCTAAATGCCC...CTGGTGACCTATTTGCACAGACCGTCGTCTTCCCTCCAGTCTTCTGAGGGATAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
CDS-3UTR TCA 90 bp ATCCCTCAGAAGACTGGAGGGAAGACGACGGTCTGTGCAAATAGGTCACCAGAGGGGCATTTAGGACCTTaGGGTCAAAGTTGCAGTCGA +
Preference number: 4 (lower is better)
Translates to: IPQKTGGKTTVCANRSPEGHLGP*GQSCSR
Trigger: TCGACTGCAACTTTGACCTCAAGGTCCTAAATGCCC...CTCTGGTGACCTATTTGCACAGACCGTCGTCTTCCCTCCAGTCTTCTGAGGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
CDS-3UTR TCA 90 bp CTTGGGATGGAATGTCCCCTATCCCTCAGAAGACTGGAGGGAAGACGACGGTCTGCGATTCTAATTCGGTaGAAACAGCGCCTTTCCTCT +
Preference number: 4 (lower is better)
Translates to: LGMECPLSLRRLEGRRRSAILIR*KQRLSS
Trigger: AGAGGAAAGGCGCTGTTTTCACCGAATTAGAATCGC...AGACCGTCGTCTTCCCTCCAGTCTTCTGAGGGATAGGGGACATTCCATCCCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571816.5
ENST00000572430.5
CDS-3UTR TCA 90 bp GGGAGAAGCTTGGGATGGAATGTCCCCTATCCCTCAGAAGACTGGAGGGAAGACATTGGATGCTTGAGATaGAGGACTTCCGGTCTCGAT +
Preference number: 4 (lower is better)
Translates to: GRSLGWNVPYPSEDWREDIGCLR*RTSGLD
Trigger: ATCGAGACCGGAAGTCCTTCATCTCAAGCATCCAAT...GTCTTCCCTCCAGTCTTCTGAGGGATAGGGGACATTCCATCCCAAGCTTCTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571816.5
ENST00000572430.5
CDS-3UTR GCA 90 bp GATGGAATGTCCCCTATCCCTCAGAAGACTGGAGGGAAGACGACGGTCTGTGCAGGGATCCAGATCTGCTaGTGGATTTCCTCACTATTC +
Preference number: 4 (lower is better)
Translates to: DGMSPIPQKTGGKTTVCAGIQIC*WISSLF
Trigger: GAATAGTGAGGAAATCCAGCAGCAGATCTGGATCCC...TGCACAGACCGTCGTCTTCCCTCCAGTCTTCTGAGGGATAGGGGACATTCCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572382.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
CDS-3UTR GCA 90 bp GGGAGAAGCTTGGGATGGAATGTCCCCTATCCCTCAGAAGACTGGAGGGAAGACGGGATCCAGATCTGCTaGTGGATTTCCTCACTATTC +
Preference number: 4 (lower is better)
Translates to: GRSLGWNVPYPSEDWREDGIQIC*WISSLF
Trigger: GAATAGTGAGGAAATCCAGCAGCAGATCTGGATCCC...GTCTTCCCTCCAGTCTTCTGAGGGATAGGGGACATTCCATCCCAAGCTTCTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572382.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
CDS-3UTR GCA 90 bp ATGAGCACAGGGGAGTACCCGCAGCTTGTCCCCATCCTCATATTCATCCAGGCAGGGATCCAGATCTGCTaGTGGATTTCCTCACTATTC +
Preference number: 4 (lower is better)
Translates to: MSTGEYPQLVPILIFIQAGIQIC*WISSLF
Trigger: GAATAGTGAGGAAATCCAGCAGCAGATCTGGATCCC...TGCCTGGATGAATATGAGGATGGGGACAAGCTGCGGGTACTCCCCTGTGCTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000575400.5
CDS-3UTR GCA 90 bp GAAGCTTGGGATGGAATGTCCCCTATCCCTCAGAAGACTGGAGGGAAGACGACGGGGATCCAGATCTGCTaGTGGATTTCCTCACTATTC +
Preference number: 4 (lower is better)
Translates to: EAWDGMSPIPQKTGGKTTGIQIC*WISSLF
Trigger: GAATAGTGAGGAAATCCAGCAGCAGATCTGGATCCC...CGTCGTCTTCCCTCCAGTCTTCTGAGGGATAGGGGACATTCCATCCCAAGCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572382.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
CDS-3UTR GCA 90 bp CCTATCCCTCAGAAGACTGGAGGGAAGACGACGGTCTGTGCAAATAGGTCACCAGACGGGATCCAGATCTaGTGCTGGATTTCCTCACTA +
Preference number: 4 (lower is better)
Translates to: PIPQKTGGKTTVCANRSPDGIQI*CWISSL
Trigger: TAGTGAGGAAATCCAGCAGCAGATCTGGATCCCGTC...TGGTGACCTATTTGCACAGACCGTCGTCTTCCCTCCAGTCTTCTGAGGGATAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572382.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
CDS-3UTR GCA 90 bp GAGAAGCTTGGGATGGAATGTCCCCTATCCCTCAGAAGACTGGAGGGAAGACGAGACGGGATCCAGATCTaGTGCTGGATTTCCTCACTA +
Preference number: 4 (lower is better)
Translates to: EKLGMECPLSLRRLEGRRDGIQI*CWISSL
Trigger: TAGTGAGGAAATCCAGCAGCAGATCTGGATCCCGTC...TCGTCTTCCCTCCAGTCTTCTGAGGGATAGGGGACATTCCATCCCAAGCTTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572382.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
CDS-3UTR GCA 90 bp TTGAGTTTCTTCCTCTTGGTCTTCGTCCCCAGGACCCCGATGAACAGGCTGCTTGACGGGATCCAGATCTaGTGCTGGATTTCCTCACTA +
Preference number: 4 (lower is better)
Translates to: LSFFLLVFVPRTPMNRLLDGIQI*CWISSL
Trigger: TAGTGAGGAAATCCAGCAGCAGATCTGGATCCCGTC...AAGCAGCCTGTTCATCGGGGTCCTGGGGACGAAGACCAAGAGGAAGAAACTCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000575400.5
CDS-3UTR GCA 90 bp TTGGGATGGAATGTCCCCTATCCCTCAGAAGACTGGAGGGAAGACGACGGTCTGACGAGCTATCATTACTaGTCCCATGGCCAAAACCAG +
Preference number: 4 (lower is better)
Translates to: LGWNVPYPSEDWREDDGLTSYHY*SHGQNQ
Trigger: CTGGTTTTGGCCATGGGAGCAGTAATGATAGCTCGT...CAGACCGTCGTCTTCCCTCCAGTCTTCTGAGGGATAGGGGACATTCCATCCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572382.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
CDS-3UTR GCA 90 bp ATAGGTGTGGGTAAGGGAGAAGCTTGGGATGGAATGTCCCCTATCCCTCAGAAGTGGAGCCGTTTCCGGTaGTGGATACAACGAGCTATC +
Preference number: 4 (lower is better)
Translates to: IGVGKGEAWDGMSPIPQKWSRFR*WIQRAI
Trigger: GATAGCTCGTTGTATCCAGCACCGGAAACGGCTCCA...CTTCTGAGGGATAGGGGACATTCCATCCCAAGCTTCTCCCTTACCCACACCTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572382.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
CDS-3UTR CCA 90 bp GTGTGGGTAAGGGAGAAGCTTGGGATGGAATGTCCCCTATCCCTCAGAAGACTGGGCCGCTTTCAGCATTaGATGCTTGAGATGAAGGAC +
Preference number: 4 (lower is better)
Translates to: VWVREKLGMECPLSLRRLGRFQH*MLEMKD
Trigger: GTCCTTCATCTCAAGCATCCAATGCTGAAAGCGGCC...CAGTCTTCTGAGGGATAGGGGACATTCCATCCCAAGCTTCTCCCTTACCCACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
CDS-3UTR CCA 90 bp GGTGTGGGTAAGGGAGAAGCTTGGGATGGAATGTCCCCTATCCCTCAGAAGACTGGCCGCTTTCAGCATTaGATGCTTGAGATGAAGGAC +
Preference number: 4 (lower is better)
Translates to: GVGKGEAWDGMSPIPQKTGRFQH*MLEMKD
Trigger: GTCCTTCATCTCAAGCATCCAATGCTGAAAGCGGCC...AGTCTTCTGAGGGATAGGGGACATTCCATCCCAAGCTTCTCCCTTACCCACACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
CDS-3UTR CCA 90 bp CTATCCCTCAGAAGACTGGAGGGAAGACGACGGTCTGTGCAAATAGGTCACCAGGGCCGCTTTCAGCATTaGATGCTTGAGATGAAGGAC +
Preference number: 4 (lower is better)
Translates to: LSLRRLEGRRRSVQIGHQGRFQH*MLEMKD
Trigger: GTCCTTCATCTCAAGCATCCAATGCTGAAAGCGGCC...CTGGTGACCTATTTGCACAGACCGTCGTCTTCCCTCCAGTCTTCTGAGGGATAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
CDS-3UTR CCA 90 bp TGTCCCCTATCCCTCAGAAGACTGGAGGGAAGACGACGGTCTGTGCAAATAGGTGGCCGCTTTCAGCATTaGATGCTTGAGATGAAGGAC +
Preference number: 4 (lower is better)
Translates to: CPLSLRRLEGRRRSVQIGGRFQH*MLEMKD
Trigger: GTCCTTCATCTCAAGCATCCAATGCTGAAAGCGGCC...ACCTATTTGCACAGACCGTCGTCTTCCCTCCAGTCTTCTGAGGGATAGGGGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
CDS-3UTR CCA 90 bp CCTATCCCTCAGAAGACTGGAGGGAAGACGACGGTCTGTGCAAATAGGTCACCAGGCCGCTTTCAGCATTaGATGCTTGAGATGAAGGAC +
Preference number: 4 (lower is better)
Translates to: PIPQKTGGKTTVCANRSPGRFQH*MLEMKD
Trigger: GTCCTTCATCTCAAGCATCCAATGCTGAAAGCGGCC...TGGTGACCTATTTGCACAGACCGTCGTCTTCCCTCCAGTCTTCTGAGGGATAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
CDS-3UTR CCA 90 bp CTCAAAAGGATAGGTGTGGGTAAGGGAGAAGCTTGGGATGGAATGTCCCCTATCGCTGCAGGCATTGTCTaGGTGAGCCTCCACAAGGAA +
Preference number: 4 (lower is better)
Translates to: LKRIGVGKGEAWDGMSPIAAGIV*VSLHKE
Trigger: TTCCTTGTGGAGGCTCACCCAGACAATGCCTGCAGC...GATAGGGGACATTCCATCCCAAGCTTCTCCCTTACCCACACCTATCCTTTTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
CDS-3UTR CCA 90 bp ATCCCTCAGAAGACTGGAGGGAAGACGACGGTCTGTGCAAATAGGTCACCAGAGCCATATCCAGCCTTCTaGGCATTTAGGACCTTGAGG +
Preference number: 4 (lower is better)
Translates to: IPQKTGGKTTVCANRSPEPYPAF*AFRTLR
Trigger: CCTCAAGGTCCTAAATGCCCAGAAGGCTGGATATGG...CTCTGGTGACCTATTTGCACAGACCGTCGTCTTCCCTCCAGTCTTCTGAGGGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
CDS-3UTR CCA 90 bp AAAAGGATAGGTGTGGGTAAGGGAGAAGCTTGGGATGGAATGTCCCCTATCCCTGGGGAAGGTATTGTCTaGAACCAGAAGCACCCGAGC +
Preference number: 4 (lower is better)
Translates to: KRIGVGKGEAWDGMSPIPGEGIV*NQKHPS
Trigger: GCTCGGGTGCTTCTGGTTCCAGACAATACCTTCCCC...AGGGATAGGGGACATTCCATCCCAAGCTTCTCCCTTACCCACACCTATCCTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572382.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
CDS-3UTR CCA 90 bp TGGAATGTCCCCTATCCCTCAGAAGACTGGAGGGAAGACGACGGTCTGTGCAAATCATTACTGCTCCCATaGCCAAAACCAGCAGTCCCA +
Preference number: 4 (lower is better)
Translates to: WNVPYPSEDWREDDGLCKSLLLP*PKPAVP
Trigger: TGGGACTGCTGGTTTTGGCCATGGGAGCAGTAATGA...TTTGCACAGACCGTCGTCTTCCCTCCAGTCTTCTGAGGGATAGGGGACATTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572382.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
CDS-3UTR CCA 90 bp AAGGGAGAAGCTTGGGATGGAATGTCCCCTATCCCTCAGAAGACTGGAGGGAAGTCATTACTGCTCCCATaGCCAAAACCAGCAGTCCCA +
Preference number: 4 (lower is better)
Translates to: KGEAWDGMSPIPQKTGGKSLLLP*PKPAVP
Trigger: TGGGACTGCTGGTTTTGGCCATGGGAGCAGTAATGA...CTTCCCTCCAGTCTTCTGAGGGATAGGGGACATTCCATCCCAAGCTTCTCCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572382.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
CDS-3UTR CCA 90 bp CTTGGGATGGAATGTCCCCTATCCCTCAGAAGACTGGAGGGAAGACGACGGTCTAGCCGTTTCCGGTGCTaGATACAACGAGCTATCATT +
Preference number: 4 (lower is better)
Translates to: LGMECPLSLRRLEGRRRSSRFRC*IQRAII
Trigger: AATGATAGCTCGTTGTATCCAGCACCGGAAACGGCT...AGACCGTCGTCTTCCCTCCAGTCTTCTGAGGGATAGGGGACATTCCATCCCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572382.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
CDS-3UTR CCA 90 bp GGTAAGGGAGAAGCTTGGGATGGAATGTCCCCTATCCCTCAGAAGACTGGAGGGAGCCGTTTCCGGTGCTaGATACAACGAGCTATCATT +
Preference number: 4 (lower is better)
Translates to: GKGEAWDGMSPIPQKTGGSRFRC*IQRAII
Trigger: AATGATAGCTCGTTGTATCCAGCACCGGAAACGGCT...CCCTCCAGTCTTCTGAGGGATAGGGGACATTCCATCCCAAGCTTCTCCCTTACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572382.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
CDS-3UTR CCA 90 bp GATGGAATGTCCCCTATCCCTCAGAAGACTGGAGGGAAGACGACGGTCTGTGCAAGCCGTTTCCGGTGCTaGATACAACGAGCTATCATT +
Preference number: 4 (lower is better)
Translates to: DGMSPIPQKTGGKTTVCASRFRC*IQRAII
Trigger: AATGATAGCTCGTTGTATCCAGCACCGGAAACGGCT...TGCACAGACCGTCGTCTTCCCTCCAGTCTTCTGAGGGATAGGGGACATTCCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572382.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
CDS-3UTR CCA 90 bp TGGAATGTCCCCTATCCCTCAGAAGACTGGAGGGAAGACGACGGTCTGTGCAAACCAGAGGTGTATGTGTaGGGGGTTATTAGACCAGGA +
Preference number: 4 (lower is better)
Translates to: WNVPYPSEDWREDDGLCKPEVYV*GVIRPG
Trigger: TCCTGGTCTAATAACCCCCCACACATACACCTCTGG...TTTGCACAGACCGTCGTCTTCCCTCCAGTCTTCTGAGGGATAGGGGACATTCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572382.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
ENST00000576965.1
CDS-3UTR CCA 90 bp AGGGAGAAGCTTGGGATGGAATGTCCCCTATCCCTCAGAAGACTGGAGGGAAGACCAGAGGTGTATGTGTaGGGGGTTATTAGACCAGGA +
Preference number: 4 (lower is better)
Translates to: REKLGMECPLSLRRLEGRPEVYV*GVIRPG
Trigger: TCCTGGTCTAATAACCCCCCACACATACACCTCTGG...TCTTCCCTCCAGTCTTCTGAGGGATAGGGGACATTCCATCCCAAGCTTCTCCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572382.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
ENST00000576965.1
CDS-3UTR CCA 90 bp AAGGGAGAAGCTTGGGATGGAATGTCCCCTATCCCTCAGAAGACTGGAGGGAAGCCAGAGGTGTATGTGTaGGGGGTTATTAGACCAGGA +
Preference number: 4 (lower is better)
Translates to: KGEAWDGMSPIPQKTGGKPEVYV*GVIRPG
Trigger: TCCTGGTCTAATAACCCCCCACACATACACCTCTGG...CTTCCCTCCAGTCTTCTGAGGGATAGGGGACATTCCATCCCAAGCTTCTCCCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572382.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
ENST00000576965.1
CDS-3UTR CCA 90 bp TGGGTAAGGGAGAAGCTTGGGATGGAATGTCCCCTATCCCTCAGAAGACTGGAGGGTAAGGGAGAAGCTTaGGATGGAATGTCCCCTATC +
Preference number: 4 (lower is better)
Translates to: WVREKLGMECPLSLRRLEGKGEA*DGMSPI
Trigger: GATAGGGGACATTCCATCCCAAGCTTCTCCCTTACC...CTCCAGTCTTCTGAGGGATAGGGGACATTCCATCCCAAGCTTCTCCCTTACCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572382.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
ENST00000576965.1
CDS-3UTR CCA 90 bp AGGGAGAAGCTTGGGATGGAATGTCCCCTATCCCTCAGAAGACTGGAGGGAAGAGGTAAGGGAGAAGCTTaGGATGGAATGTCCCCTATC +
Preference number: 4 (lower is better)
Translates to: REKLGMECPLSLRRLEGRGKGEA*DGMSPI
Trigger: GATAGGGGACATTCCATCCCAAGCTTCTCCCTTACC...TCTTCCCTCCAGTCTTCTGAGGGATAGGGGACATTCCATCCCAAGCTTCTCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572382.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
ENST00000576965.1
CDS-3UTR CCA 90 bp CTATCCCTCAGAAGACTGGAGGGAAGACGACGGTCTGTGCAAATAGGTCACCAGGGTAAGGGAGAAGCTTaGGATGGAATGTCCCCTATC +
Preference number: 4 (lower is better)
Translates to: LSLRRLEGRRRSVQIGHQGKGEA*DGMSPI
Trigger: GATAGGGGACATTCCATCCCAAGCTTCTCCCTTACC...CTGGTGACCTATTTGCACAGACCGTCGTCTTCCCTCCAGTCTTCTGAGGGATAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572382.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
ENST00000576965.1
CDS-3UTR CCA 90 bp AAGGGAGAAGCTTGGGATGGAATGTCCCCTATCCCTCAGAAGACTGGAGGGAAGGGTAAGGGAGAAGCTTaGGATGGAATGTCCCCTATC +
Preference number: 4 (lower is better)
Translates to: KGEAWDGMSPIPQKTGGKGKGEA*DGMSPI
Trigger: GATAGGGGACATTCCATCCCAAGCTTCTCCCTTACC...CTTCCCTCCAGTCTTCTGAGGGATAGGGGACATTCCATCCCAAGCTTCTCCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572382.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
ENST00000576965.1
CDS-3UTR CCA 90 bp CTTGGGATGGAATGTCCCCTATCCCTCAGAAGACTGGAGGGAAGACGACGGTCTACAGCGCCTTTCCTCTaGTTTCCAAATCAGTTACGC +
Preference number: 4 (lower is better)
Translates to: LGMECPLSLRRLEGRRRSTAPFL*FPNQLR
Trigger: GCGTAACTGATTTGGAAACCAGAGGAAAGGCGCTGT...AGACCGTCGTCTTCCCTCCAGTCTTCTGAGGGATAGGGGACATTCCATCCCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571816.5
ENST00000572430.5
CDS-3UTR TCA 90 bp CAGAAGACTGGAGGGAAGACGACGGTCTGTGCAAATAGGTCACCAGAGGTGTATGGGCATTTAGGACCTTaGGGTCAAAGTTGCAGTCGA +
Preference number: 4 (lower is better)
Translates to: QKTGGKTTVCANRSPEVYGHLGP*GQSCSR
Trigger: TCGACTGCAACTTTGACCTCAAGGTCCTAAATGCCC...ATACACCTCTGGTGACCTATTTGCACAGACCGTCGTCTTCCCTCCAGTCTTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
CDS-3UTR TCA 90 bp AAAAGGATAGGTGTGGGTAAGGGAGAAGCTTGGGATGGAATGTCCCCTATCCCTCAGTGGGGGATCTGTTaGAGGCCCAGGAAAAACAAG +
Preference number: 4 (lower is better)
Translates to: KRIGVGKGEAWDGMSPIPQWGIC*RPRKNK
Trigger: CTTGTTTTTCCTGGGCCTTCAACAGATCCCCCACTG...AGGGATAGGGGACATTCCATCCCAAGCTTCTCCCTTACCCACACCTATCCTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 7 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572382.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
ENST00000576965.1
CDS-3UTR TCA 90 bp AGAAGCTTGGGATGGAATGTCCCCTATCCCTCAGAAGACTGGAGGGAAGACGACATTGGATGCTTGAGATaGAGGACTTCCGGTCTCGAT +
Preference number: 4 (lower is better)
Translates to: RSLGWNVPYPSEDWREDDIGCLR*RTSGLD
Trigger: ATCGAGACCGGAAGTCCTTCATCTCAAGCATCCAAT...GTCGTCTTCCCTCCAGTCTTCTGAGGGATAGGGGACATTCCATCCCAAGCTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571816.5
ENST00000572430.5
CDS-3UTR GCA 90 bp AGGGAGAAGCTTGGGATGGAATGTCCCCTATCCCTCAGAAGACTGGAGGGAAGAGGGATCCAGATCTGCTaGTGGATTTCCTCACTATTC +
Preference number: 4 (lower is better)
Translates to: REKLGMECPLSLRRLEGRGIQIC*WISSLF
Trigger: GAATAGTGAGGAAATCCAGCAGCAGATCTGGATCCC...TCTTCCCTCCAGTCTTCTGAGGGATAGGGGACATTCCATCCCAAGCTTCTCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572382.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
CDS-3UTR GCA 90 bp CTATCCCTCAGAAGACTGGAGGGAAGACGACGGTCTGTGCAAATAGGTCACCAGACGAGCTATCATTACTaGTCCCATGGCCAAAACCAG +
Preference number: 4 (lower is better)
Translates to: LSLRRLEGRRRSVQIGHQTSYHY*SHGQNQ
Trigger: CTGGTTTTGGCCATGGGAGCAGTAATGATAGCTCGT...CTGGTGACCTATTTGCACAGACCGTCGTCTTCCCTCCAGTCTTCTGAGGGATAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572382.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
CDS-3UTR GCA 90 bp GGTGTGGGTAAGGGAGAAGCTTGGGATGGAATGTCCCCTATCCCTCAGAAGACTACGAGCTATCATTACTaGTCCCATGGCCAAAACCAG +
Preference number: 4 (lower is better)
Translates to: GVGKGEAWDGMSPIPQKTTSYHY*SHGQNQ
Trigger: CTGGTTTTGGCCATGGGAGCAGTAATGATAGCTCGT...AGTCTTCTGAGGGATAGGGGACATTCCATCCCAAGCTTCTCCCTTACCCACACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572382.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
CDS-3UTR GCA 90 bp GTGTGGGTAAGGGAGAAGCTTGGGATGGAATGTCCCCTATCCCTCAGAAGACTGACGAGCTATCATTACTaGTCCCATGGCCAAAACCAG +
Preference number: 4 (lower is better)
Translates to: VWVREKLGMECPLSLRRLTSYHY*SHGQNQ
Trigger: CTGGTTTTGGCCATGGGAGCAGTAATGATAGCTCGT...CAGTCTTCTGAGGGATAGGGGACATTCCATCCCAAGCTTCTCCCTTACCCACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572382.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
CDS-3UTR GCA 90 bp AAAAGGATAGGTGTGGGTAAGGGAGAAGCTTGGGATGGAATGTCCCCTATCCCTGATGAACAGGCTGCTTaGAAATGGGGCAGGTCTTCC +
Preference number: 4 (lower is better)
Translates to: KRIGVGKGEAWDGMSPIPDEQAA*KWGRSS
Trigger: GGAAGACCTGCCCCATTTGCAAGCAGCCTGTTCATC...AGGGATAGGGGACATTCCATCCCAAGCTTCTCCCTTACCCACACCTATCCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572382.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
ENST00000576965.1
CDS-3UTR CCA 90 bp TGGAATGTCCCCTATCCCTCAGAAGACTGGAGGGAAGACGACGGTCTGTGCAAAAGCCGTTTCCGGTGCTaGATACAACGAGCTATCATT +
Preference number: 4 (lower is better)
Translates to: WNVPYPSEDWREDDGLCKSRFRC*IQRAII
Trigger: AATGATAGCTCGTTGTATCCAGCACCGGAAACGGCT...TTTGCACAGACCGTCGTCTTCCCTCCAGTCTTCTGAGGGATAGGGGACATTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572382.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
CDS-3UTR CCA 90 bp ATAGGTGTGGGTAAGGGAGAAGCTTGGGATGGAATGTCCCCTATCCCTCAGAAGCCAGAGGTGTATGTGTaGGGGGTTATTAGACCAGGA +
Preference number: 4 (lower is better)
Translates to: IGVGKGEAWDGMSPIPQKPEVYV*GVIRPG
Trigger: TCCTGGTCTAATAACCCCCCACACATACACCTCTGG...CTTCTGAGGGATAGGGGACATTCCATCCCAAGCTTCTCCCTTACCCACACCTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572382.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
ENST00000576965.1
CDS-3UTR TCA 90 bp CTCAAAAGGATAGGTGTGGGTAAGGGAGAAGCTTGGGATGGAATGTCCCCTATCGGGCATTTAGGACCTTaGGGTCAAAGTTGCAGTCGA +
Preference number: 4 (lower is better)
Translates to: LKRIGVGKGEAWDGMSPIGHLGP*GQSCSR
Trigger: TCGACTGCAACTTTGACCTCAAGGTCCTAAATGCCC...GATAGGGGACATTCCATCCCAAGCTTCTCCCTTACCCACACCTATCCTTTTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
CDS-3UTR TCA 90 bp AAGGGAGAAGCTTGGGATGGAATGTCCCCTATCCCTCAGAAGACTGGAGGGAAGATTGGATGCTTGAGATaGAGGACTTCCGGTCCTAAA +
Preference number: 4 (lower is better)
Translates to: KGEAWDGMSPIPQKTGGKIGCLR*RTSGPK
Trigger: TTTAGGACCGGAAGTCCTTCATCTCAAGCATCCAAT...CTTCCCTCCAGTCTTCTGAGGGATAGGGGACATTCCATCCCAAGCTTCTCCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575111.5
CDS-3UTR GCA 90 bp ATAGGTGTGGGTAAGGGAGAAGCTTGGGATGGAATGTCCCCTATCCCTCAGAAGGGGATCCAGATCTGCTaGTGGATTTCCTCACTATTC +
Preference number: 4 (lower is better)
Translates to: IGVGKGEAWDGMSPIPQKGIQIC*WISSLF
Trigger: GAATAGTGAGGAAATCCAGCAGCAGATCTGGATCCC...CTTCTGAGGGATAGGGGACATTCCATCCCAAGCTTCTCCCTTACCCACACCTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572382.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
CDS-3UTR GCA 90 bp CTCAAAAGGATAGGTGTGGGTAAGGGAGAAGCTTGGGATGGAATGTCCCCTATCGACGGGATCCAGATCTaGTGCTGGATTTCCTCACTA +
Preference number: 4 (lower is better)
Translates to: LKRIGVGKGEAWDGMSPIDGIQI*CWISSL
Trigger: TAGTGAGGAAATCCAGCAGCAGATCTGGATCCCGTC...GATAGGGGACATTCCATCCCAAGCTTCTCCCTTACCCACACCTATCCTTTTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572382.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
CDS-3UTR GCA 90 bp GAAACAATTTTATTAGCCCAAGAAGTGAAGACCCAGTCCCTCTGCTTGCCCCAGGATGAACAGGCTGCTTaGAAATGGGGCAGGTCTTCC +
Preference number: 4 (lower is better)
Translates to: ETILLAQEVKTQSLCLPQDEQAA*KWGRSS
Trigger: GGAAGACCTGCCCCATTTGCAAGCAGCCTGTTCATC...CTGGGGCAAGCAGAGGGACTGGGTCTTCACTTCTTGGGCTAATAAAATTGTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262482.11
ENST00000576965.1
CDS-3UTR CCA 90 bp AAAAGGATAGGTGTGGGTAAGGGAGAAGCTTGGGATGGAATGTCCCCTATCCCTTCATTACTGCTCCCATaGCCAAAACCAGCAGTCCCA +
Preference number: 4 (lower is better)
Translates to: KRIGVGKGEAWDGMSPIPSLLLP*PKPAVP
Trigger: TGGGACTGCTGGTTTTGGCCATGGGAGCAGTAATGA...AGGGATAGGGGACATTCCATCCCAAGCTTCTCCCTTACCCACACCTATCCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572382.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
CDS-3UTR CCA 90 bp CAGAAGACTGGAGGGAAGACGACGGTCTGTGCAAATAGGTCACCAGAGGTGTATACAGCGCCTTTCCTCTaGTTTCCAAATCAGTTACGC +
Preference number: 4 (lower is better)
Translates to: QKTGGKTTVCANRSPEVYTAPFL*FPNQLR
Trigger: GCGTAACTGATTTGGAAACCAGAGGAAAGGCGCTGT...ATACACCTCTGGTGACCTATTTGCACAGACCGTCGTCTTCCCTCCAGTCTTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571816.5
ENST00000572430.5
CDS-3UTR GCA 90 bp AAAAGGATAGGTGTGGGTAAGGGAGAAGCTTGGGATGGAATGTCCCCTATCCCTACGAGCTATCATTACTaGTCCCATGGCCAAAACCAG +
Preference number: 4 (lower is better)
Translates to: KRIGVGKGEAWDGMSPIPTSYHY*SHGQNQ
Trigger: CTGGTTTTGGCCATGGGAGCAGTAATGATAGCTCGT...AGGGATAGGGGACATTCCATCCCAAGCTTCTCCCTTACCCACACCTATCCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572382.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
CDS-3UTR CCA 90 bp CTCAAAAGGATAGGTGTGGGTAAGGGAGAAGCTTGGGATGGAATGTCCCCTATCAGCCGTTTCCGGTGCTaGATACAACGAGCTATCATT +
Preference number: 4 (lower is better)
Translates to: LKRIGVGKGEAWDGMSPISRFRC*IQRAII
Trigger: AATGATAGCTCGTTGTATCCAGCACCGGAAACGGCT...GATAGGGGACATTCCATCCCAAGCTTCTCCCTTACCCACACCTATCCTTTTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572382.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
CDS GCA 90 bp TCCTTCAGCTCCGCCTTACTCCCGGCCGCCTTTGCGCTGCGCGCCTaGGCCCGCGCCGGCTTCCAGCGGGTGTCGGACCTGAGAGCTGGA +
Preference number: 5 (lower is better)
Translates to: SFSSALLPAAFALRA*ARAGFQRVSDLRAG
Trigger: TCCAGCTCTCAGGTCCGACACCCGCTGGAAGCCGGCGCGGGCGCAGGCGCGCAGCGCAAAGGCGGCCGGGAGTAAGGCGGAGCTGAAGGA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571816.5
CDS GCA 90 bp CGCGTCCTGGTAGCAAGGAGCAGAAGCGGAGTTCTGCGCCCTCCCTaGCCCTCCTTTAGGATCCCAGGGGTCCAACCACCCCCAGGTCCC +
Preference number: 5 (lower is better)
Translates to: RVLVARSRSGVLRPP*PSFRIPGVQPPPGP
Trigger: GGGACCTGGGGGTGGTTGGACCCCTGGGATCCTAAAGGAGGGGCAGGGAGGGCGCAGAACTCCGCTTCTGCTCCTTGCTACCAGGACGCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262482.11
ENST00000570492.5
ENST00000575111.5
ENST00000575400.5
CDS GCA 90 bp CCGGGTCTGAGTGAGCCAGGGGTCCACGCAGCGGCTGTGGTAGGCTaGAGAGAGGAACAAGGTGAAGCACCTGGTGGCTGCTGGTGGCAG +
Preference number: 5 (lower is better)
Translates to: PGLSEPGVHAAAVVG*REEQGEAPGGCWWQ
Trigger: CTGCCACCAGCAGCCACCAGGTGCTTCACCTTGTTCCTCTCTGCAGCCTACCACAGCCGCTGCGTGGACCCCTGGCTCACTCAGACCCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572382.5
CDS-3UTR CAA 90 bp GGTAAGGGAGAAGCTTGGGATGGAATGTCCCCTATCCCTCAGAAGACTGGAGGGTACTCCCGGCCGCCTTaGCGCTGCGCGCCTGCGCCC +
Preference number: 5 (lower is better)
Translates to: GKGEAWDGMSPIPQKTGGYSRPP*RCAPAP
Trigger: GGGCGCAGGCGCGCAGCGCAAAGGCGGCCGGGAGTA...CCCTCCAGTCTTCTGAGGGATAGGGGACATTCCATCCCAAGCTTCTCCCTTACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571816.5
CDS TCA 90 bp GATGAACAGGCTGCTTGCAAATGGGGCAGGTCTTCCGGGTCTGAGTaGGCCAGGGGTCCACGCAGCGGCTGTGGTAGGCTGCAGAGAGGA +
Preference number: 5 (lower is better)
Translates to: DEQAACKWGRSSGSE*ARGPRSGCGRLQRG
Trigger: TCCTCTCTGCAGCCTACCACAGCCGCTGCGTGGACCCCTGGCTCACTCAGACCCGGAAGACCTGCCCCATTTGCAAGCAGCCTGTTCATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572382.5
CDS GCA 90 bp GCGAGAGTGCTCACCACCTCTCCCGTCCCCTCGCAGCTGAATAGTTaGTGTGTCTATCGCGAGAGCGCTCCAACTTGGCGAGCCGTACTC +
Preference number: 5 (lower is better)
Translates to: ARVLTTSPVPSQLNS*CVYRESAPTWRAVL
Trigger: GAGTACGGCTCGCCAAGTTGGAGCGCTCTCGCGATAGACACAGCAACTATTCAGCTGCGAGGGGACGGGAGAGGTGGTGAGCACTCTCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576452.5
CDS CCA 90 bp TCGGGAAGGGTGGCGGAGCTCAAGGAGGTGGGACTTCCTGCTAGGTaGGCCGTGTTCCCAGCCTCTGGAAAAGGGCTTCCGGTAGAGAAA +
Preference number: 5 (lower is better)
Translates to: SGRVAELKEVGLPAR*AVFPASGKGLPVEK
Trigger: TTTCTCTACCGGAAGCCCTTTTCCAGAGGCTGGGAACACGGCCCACCTAGCAGGAAGTCCCACCTCCTTGAGCTCCGCCACCCTTCCCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262482.11
ENST00000571365.1
ENST00000571816.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
CDS CCA 90 bp AGGGGACGGAGCCTAACACAGGTGACAGAAAAACTTCGGGAAGGGTaGCGGAGCTCAAGGAGGTGGGACTTCCTGCTAGGTGGGCCGTGT +
Preference number: 5 (lower is better)
Translates to: RGRSLTQVTEKLREG*RSSRRWDFLLGGPC
Trigger: ACACGGCCCACCTAGCAGGAAGTCCCACCTCCTTGAGCTCCGCCACCCTTCCCGAAGTTTTTCTGTCACCTGTGTTAGGCTCCGTCCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000262482.11
ENST00000571365.1
ENST00000571816.5
ENST00000575111.5
ENST00000576229.5
CDS TCA 90 bp CAAATCTCGCGAGAGTGCTCACCACCTCTCCCGTCCCCTCGCAGCTaGATAGTTGCTGTGTCTATCGCGAGAGCGCTCCAACTTGGCGAG +
Preference number: 5 (lower is better)
Translates to: QISRECSPPLPSPRS*IVAVSIARALQLGE
Trigger: CTCGCCAAGTTGGAGCGCTCTCGCGATAGACACAGCAACTATTCAGCTGCGAGGGGACGGGAGAGGTGGTGAGCACTCTCGCGAGATTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576452.5
CDS CCA 90 bp CAGGTGACAGAAAAACTTCGGGAAGGGTGGCGGAGCTCAAGGAGGTaGGACTTCCTGCTAGGTGGGCCGTGTTCCCAGCCTCTGGAAAAG +
Preference number: 5 (lower is better)
Translates to: QVTEKLREGWRSSRR*DFLLGGPCSQPLEK
Trigger: CTTTTCCAGAGGCTGGGAACACGGCCCACCTAGCAGGAAGTCCCACCTCCTTGAGCTCCGCCACCCTTCCCGAAGTTTTTCTGTCACCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000262482.11
ENST00000571365.1
ENST00000571816.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
CDS-3UTR CAA 90 bp CCGGGTCTGAGTGAGCCAGGGGTCCACGCAGCGGCTGTGGTAGGCATGAGCACAACCTTGAGGTCAAAGTaGCAGTCGAATCTTCGAAGC +
Preference number: 5 (lower is better)
Translates to: PGLSEPGVHAAAVVGMSTTLRSK*QSNLRS
Trigger: GCTTCGAAGATTCGACTGCAACTTTGACCTCAAGGT...TGTGCTCATGCCTACCACAGCCGCTGCGTGGACCCCTGGCTCACTCAGACCCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575400.5
CDS-3UTR CAA 90 bp CCCAGGACCCCGATGAACAGGCTGCTTGCAAATGGGGCAGGTCTTCCGGGTCTGTTGAGTTTCTTCCTCTaGGTCTTCGTCCCCAGGACC +
Preference number: 5 (lower is better)
Translates to: PRTPMNRLLANGAGLPGLLSFFL*VFVPRT
Trigger: GGTCCTGGGGACGAAGACCAAGAGGAAGAAACTCAA...CAGACCCGGAAGACCTGCCCCATTTGCAAGCAGCCTGTTCATCGGGGTCCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000575400.5
CDS CCA 90 bp AGCCCAAGGGGAAGGTATTGTCTGGAACCAGAAGCACCCGAGCCCTaGGAAAAGGATGACCAGTCTCAGCAGGGCGAGAAAGGCAAAGGG +
Preference number: 5 (lower is better)
Translates to: SPRGRYCLEPEAPEP*EKDDQSQQGEKGKG
Trigger: CCCTTTGCCTTTCTCGCCCTGCTGAGACTGGTCATCCTTTTCCCAGGGCTCGGGTGCTTCTGGTTCCAGACAATACCTTCCCCTTGGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000575524.1
CDS-3UTR CAA 90 bp GGGATGGAATGTCCCCTATCCCTCAGAAGACTGGAGGGAAGACGACGGTCTGTGAAGTCCATGCTGGCATaGTGGTCCGAGGTCGCTCGA +
Preference number: 5 (lower is better)
Translates to: GMECPLSLRRLEGRRRSVKSMLA*WSEVAR
Trigger: TCGAGCGACCTCGGACCACAATGCCAGCATGGACTT...CACAGACCGTCGTCTTCCCTCCAGTCTTCTGAGGGATAGGGGACATTCCATCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
CDS-3UTR CAA 90 bp CCCAGGACCCCGATGAACAGGCTGCTTGCAAATGGGGCAGGTCTTCCGGGTCTGTGGGCATTTAGGACCTaGAGGTCAAAGTTGCAGTCG +
Preference number: 5 (lower is better)
Translates to: PRTPMNRLLANGAGLPGLWAFRT*RSKLQS
Trigger: CGACTGCAACTTTGACCTCAAGGTCCTAAATGCCCA...CAGACCCGGAAGACCTGCCCCATTTGCAAGCAGCCTGTTCATCGGGGTCCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000575400.5
CDS GCA 90 bp TTCAGTTGCTCTTTGGTAAGTCGATTCCGCTGGAGCCGTTTCCGGTaGTGGATACAACGAGCTATCTGGGGGAAGCGGGGGTGGATGGAC +
Preference number: 5 (lower is better)
Translates to: FSCSLVSRFRWSRFR*WIQRAIWGKRGWMD
Trigger: GTCCATCCACCCCCGCTTCCCCCAGATAGCTCGTTGTATCCAGCACCGGAAACGGCTCCAGCGGAATCGACTTACCAAAGAGCAACTGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000575524.1
CDS CCA 90 bp GGCCTGGGCTCCAGGTTGGCATGGAACTGCTTGCTGAAGGAAGAATaGGAAGGAGGCACATGTCCTACCCCTTCTCGTAGACAAAGAGGG +
Preference number: 5 (lower is better)
Translates to: GLGSRLAWNCLLKEE*EGGTCPTPSRRQRG
Trigger: CCCTCTTTGTCTACGAGAAGGGGTAGGACATGTGCCTCCTTCCCATTCTTCCTTCAGCAAGCAGTTCCATGCCAACCTGGAGCCCAGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572554.1
CDS CCA 90 bp AGTTGCTCTTTGGTAAGTCGATTCCGCTGGAGCCGTTTCCGGTGCTaGATACAACGAGCTATCTGGGGGAAGCGGGGGTGGATGGACAAG +
Preference number: 5 (lower is better)
Translates to: SCSLVSRFRWSRFRC*IQRAIWGKRGWMDK
Trigger: CTTGTCCATCCACCCCCGCTTCCCCCAGATAGCTCGTTGTATCCAGCACCGGAAACGGCTCCAGCGGAATCGACTTACCAAAGAGCAACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000575524.1
CDS-3UTR CAA 90 bp GGGATGGAATGTCCCCTATCCCTCAGAAGACTGGAGGGAAGACGACGGTCTGTGGGGAGTACCCGCAGCTaGTCCCCATCCTCATATTCA +
Preference number: 5 (lower is better)
Translates to: GMECPLSLRRLEGRRRSVGSTRS*SPSSYS
Trigger: TGAATATGAGGATGGGGACAAGCTGCGGGTACTCCC...CACAGACCGTCGTCTTCCCTCCAGTCTTCTGAGGGATAGGGGACATTCCATCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572382.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
CDS-3UTR CAA 90 bp GCTTGGGATGGAATGTCCCCTATCCCTCAGAAGACTGGAGGGAAGACGACGGTCGGGAGTACCCGCAGCTaGTCCCCATCCTCATATTCA +
Preference number: 5 (lower is better)
Translates to: AWDGMSPIPQKTGGKTTVGSTRS*SPSSYS
Trigger: TGAATATGAGGATGGGGACAAGCTGCGGGTACTCCC...GACCGTCGTCTTCCCTCCAGTCTTCTGAGGGATAGGGGACATTCCATCCCAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572382.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
CDS GCA 90 bp TCCCATCTCCCAACTCCAGATCCAGTCTGGCCTCACAGGCCTCAGTaGTTCCCATCATGTTCCCTCAGCTACTCACCATTACTGCTCCCA +
Preference number: 5 (lower is better)
Translates to: SHLPTPDPVWPHRPQ*FPSCSLSYSPLLLP
Trigger: TGGGAGCAGTAATGGTGAGTAGCTGAGGGAACATGATGGGAAGCACTGAGGCCTGTGAGGCCAGACTGGATCTGGAGTTGGGAGATGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575524.1
CDS CCA 90 bp CCCTGTGAAAGGGATGAGGTAATAGCCCAAGGGGAAGGTATTGTCTaGAACCAGAAGCACCCGAGCCCCCTTCTCGTAGACAAAGAGGGC +
Preference number: 5 (lower is better)
Translates to: PCERDEVIAQGEGIV*NQKHPSPLLVDKEG
Trigger: GCCCTCTTTGTCTACGAGAAGGGGGCTCGGGTGCTTCTGGTTCCAGACAATACCTTCCCCTTGGGCTATTACCTCATCCCTTTCACAGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572382.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
CDS-3UTR CAA 90 bp GGTGTGGGTAAGGGAGAAGCTTGGGATGGAATGTCCCCTATCCCTCAGAAGACTAAGTCCATGCTGGCATaGTGGTCCGAGGTCGCTCGA +
Preference number: 5 (lower is better)
Translates to: GVGKGEAWDGMSPIPQKTKSMLA*WSEVAR
Trigger: TCGAGCGACCTCGGACCACAATGCCAGCATGGACTT...AGTCTTCTGAGGGATAGGGGACATTCCATCCCAAGCTTCTCCCTTACCCACACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
CDS-3UTR CAA 90 bp CCTATCCCTCAGAAGACTGGAGGGAAGACGACGGTCTGTGCAAATAGGTCACCAAAGTCCATGCTGGCATaGTGGTCCGAGGTCGCTCGA +
Preference number: 5 (lower is better)
Translates to: PIPQKTGGKTTVCANRSPKSMLA*WSEVAR
Trigger: TCGAGCGACCTCGGACCACAATGCCAGCATGGACTT...TGGTGACCTATTTGCACAGACCGTCGTCTTCCCTCCAGTCTTCTGAGGGATAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
CDS-3UTR CAA 90 bp TGGGTAAGGGAGAAGCTTGGGATGGAATGTCCCCTATCCCTCAGAAGACTGGAGAAGTCCATGCTGGCATaGTGGTCCGAGGTCGCTCGA +
Preference number: 5 (lower is better)
Translates to: WVREKLGMECPLSLRRLEKSMLA*WSEVAR
Trigger: TCGAGCGACCTCGGACCACAATGCCAGCATGGACTT...CTCCAGTCTTCTGAGGGATAGGGGACATTCCATCCCAAGCTTCTCCCTTACCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
CDS-3UTR CAA 90 bp AGGGAGAAGCTTGGGATGGAATGTCCCCTATCCCTCAGAAGACTGGAGGGAAGAATAAAGACTGACCCATaGACCGGGGCTGGGGGTGGT +
Preference number: 5 (lower is better)
Translates to: REKLGMECPLSLRRLEGRIKTDP*TGAGGG
Trigger: ACCACCCCCAGCCCCGGTCAATGGGTCAGTCTTTAT...TCTTCCCTCCAGTCTTCTGAGGGATAGGGGACATTCCATCCCAAGCTTCTCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
CDS-3UTR CAA 90 bp GGTAAGGGAGAAGCTTGGGATGGAATGTCCCCTATCCCTCAGAAGACTGGAGGGCCCAAGGGGAAGGTATaGTCTGGAACCAGAAGCACC +
Preference number: 5 (lower is better)
Translates to: GKGEAWDGMSPIPQKTGGPKGKV*SGTRST
Trigger: GGTGCTTCTGGTTCCAGACAATACCTTCCCCTTGGG...CCCTCCAGTCTTCTGAGGGATAGGGGACATTCCATCCCAAGCTTCTCCCTTACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572382.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
CDS-3UTR CAA 90 bp CTTGGGATGGAATGTCCCCTATCCCTCAGAAGACTGGAGGGAAGACGACGGTCTCCCAAGGGGAAGGTATaGTCTGGAACCAGAAGCACC +
Preference number: 5 (lower is better)
Translates to: LGMECPLSLRRLEGRRRSPKGKV*SGTRST
Trigger: GGTGCTTCTGGTTCCAGACAATACCTTCCCCTTGGG...AGACCGTCGTCTTCCCTCCAGTCTTCTGAGGGATAGGGGACATTCCATCCCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572382.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
CDS-3UTR CAA 90 bp GGGAGAAGCTTGGGATGGAATGTCCCCTATCCCTCAGAAGACTGGAGGGAAGACGGGAGTACCCGCAGCTaGTCCCCATCCTCATATTCA +
Preference number: 5 (lower is better)
Translates to: GRSLGWNVPYPSEDWREDGSTRS*SPSSYS
Trigger: TGAATATGAGGATGGGGACAAGCTGCGGGTACTCCC...GTCTTCCCTCCAGTCTTCTGAGGGATAGGGGACATTCCATCCCAAGCTTCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572382.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
CDS-3UTR CAA 90 bp GGTAGGCATGAGCACAGGGGAGTACCCGCAGCTTGTCCCCATCCTCATATTCATGGGAGTACCCGCAGCTaGTCCCCATCCTCATATTCA +
Preference number: 5 (lower is better)
Translates to: GRHEHRGVPAACPHPHIHGSTRS*SPSSYS
Trigger: TGAATATGAGGATGGGGACAAGCTGCGGGTACTCCC...ATGAATATGAGGATGGGGACAAGCTGCGGGTACTCCCCTGTGCTCATGCCTACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000575400.5
CDS CCA 90 bp CCCTGTGAAAGGGATGAGGTAATAGCCCAAGGGGAAGGTATTGTCTaGAACCAGAAGCACCCGAGCCCTGGGAAAAGGATGACCAGTCTC +
Preference number: 5 (lower is better)
Translates to: PCERDEVIAQGEGIV*NQKHPSPGKRMTSL
Trigger: GAGACTGGTCATCCTTTTCCCAGGGCTCGGGTGCTTCTGGTTCCAGACAATACCTTCCCCTTGGGCTATTACCTCATCCCTTTCACAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000575524.1
CDS-3UTR CAA 90 bp CCTATCCCTCAGAAGACTGGAGGGAAGACGACGGTCTGTGCAAATAGGTCACCACCCAAGGGGAAGGTATaGTCTGGAACCAGAAGCACC +
Preference number: 5 (lower is better)
Translates to: PIPQKTGGKTTVCANRSPPKGKV*SGTRST
Trigger: GGTGCTTCTGGTTCCAGACAATACCTTCCCCTTGGG...TGGTGACCTATTTGCACAGACCGTCGTCTTCCCTCCAGTCTTCTGAGGGATAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572382.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
CDS-3UTR CAA 90 bp AAGGGAGAAGCTTGGGATGGAATGTCCCCTATCCCTCAGAAGACTGGAGGGAAGGGGAGTACCCGCAGCTaGTCCCCATCCTCATATTCA +
Preference number: 5 (lower is better)
Translates to: KGEAWDGMSPIPQKTGGKGSTRS*SPSSYS
Trigger: TGAATATGAGGATGGGGACAAGCTGCGGGTACTCCC...CTTCCCTCCAGTCTTCTGAGGGATAGGGGACATTCCATCCCAAGCTTCTCCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572382.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
CDS-3UTR CAA 90 bp AGGGAGAAGCTTGGGATGGAATGTCCCCTATCCCTCAGAAGACTGGAGGGAAGAGGGAGTACCCGCAGCTaGTCCCCATCCTCATATTCA +
Preference number: 5 (lower is better)
Translates to: REKLGMECPLSLRRLEGRGSTRS*SPSSYS
Trigger: TGAATATGAGGATGGGGACAAGCTGCGGGTACTCCC...TCTTCCCTCCAGTCTTCTGAGGGATAGGGGACATTCCATCCCAAGCTTCTCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572382.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
CDS-3UTR CAA 90 bp GTGTGGGTAAGGGAGAAGCTTGGGATGGAATGTCCCCTATCCCTCAGAAGACTGGGGAGTACCCGCAGCTaGTCCCCATCCTCATATTCA +
Preference number: 5 (lower is better)
Translates to: VWVREKLGMECPLSLRRLGSTRS*SPSSYS
Trigger: TGAATATGAGGATGGGGACAAGCTGCGGGTACTCCC...CAGTCTTCTGAGGGATAGGGGACATTCCATCCCAAGCTTCTCCCTTACCCACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572382.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
CDS-3UTR CAA 90 bp TTGGGATGGAATGTCCCCTATCCCTCAGAAGACTGGAGGGAAGACGACGGTCTGTTGAGTTTCTTCCTCTaGGTCTTCGTCCCCAGGACC +
Preference number: 5 (lower is better)
Translates to: LGWNVPYPSEDWREDDGLLSFFL*VFVPRT
Trigger: GGTCCTGGGGACGAAGACCAAGAGGAAGAAACTCAA...CAGACCGTCGTCTTCCCTCCAGTCTTCTGAGGGATAGGGGACATTCCATCCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572382.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
ENST00000576965.1
CDS-3UTR CAA 90 bp GATGGAATGTCCCCTATCCCTCAGAAGACTGGAGGGAAGACGACGGTCTGTGCATTGAGTTTCTTCCTCTaGGTCTTCGTCCCCAGGACC +
Preference number: 5 (lower is better)
Translates to: DGMSPIPQKTGGKTTVCALSFFL*VFVPRT
Trigger: GGTCCTGGGGACGAAGACCAAGAGGAAGAAACTCAA...TGCACAGACCGTCGTCTTCCCTCCAGTCTTCTGAGGGATAGGGGACATTCCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572382.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
ENST00000576965.1
CDS-3UTR CAA 90 bp GGGAGAAGCTTGGGATGGAATGTCCCCTATCCCTCAGAAGACTGGAGGGAAGACTTGAGTTTCTTCCTCTaGGTCTTCGTCCCCAGGACC +
Preference number: 5 (lower is better)
Translates to: GRSLGWNVPYPSEDWREDLSFFL*VFVPRT
Trigger: GGTCCTGGGGACGAAGACCAAGAGGAAGAAACTCAA...GTCTTCCCTCCAGTCTTCTGAGGGATAGGGGACATTCCATCCCAAGCTTCTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572382.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
ENST00000576965.1
CDS-3UTR CAA 90 bp GGGATGGAATGTCCCCTATCCCTCAGAAGACTGGAGGGAAGACGACGGTCTGTGACAGTGGGGGATCTGTaGAAGGCCCAGGAAAAACAA +
Preference number: 5 (lower is better)
Translates to: GMECPLSLRRLEGRRRSVTVGDL*KAQEKQ
Trigger: TTGTTTTTCCTGGGCCTTCAACAGATCCCCCACTGT...CACAGACCGTCGTCTTCCCTCCAGTCTTCTGAGGGATAGGGGACATTCCATCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572382.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
ENST00000576965.1
CDS CCA 90 bp TCGCAGCTGAATAGTTGCTGTGTCTATCGCGAGAGCGCTCCAACTTaGCGAGCCGTACTCACTCGATCTCGCGAGACCTTCAAACAAACT +
Preference number: 5 (lower is better)
Translates to: SQLNSCCVYRESAPT*RAVLTRSRETFKQT
Trigger: AGTTTGTTTGAAGGTCTCGCGAGATCGAGTGAGTACGGCTCGCCAAGTTGGAGCGCTCTCGCGATAGACACAGCAACTATTCAGCTGCGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576452.5
CDS-3UTR CAA 90 bp GATGGAATGTCCCCTATCCCTCAGAAGACTGGAGGGAAGACGACGGTCTGTGCATGGGCATTTAGGACCTaGAGGTCAAAGTTGCAGTCG +
Preference number: 5 (lower is better)
Translates to: DGMSPIPQKTGGKTTVCAWAFRT*RSKLQS
Trigger: CGACTGCAACTTTGACCTCAAGGTCCTAAATGCCCA...TGCACAGACCGTCGTCTTCCCTCCAGTCTTCTGAGGGATAGGGGACATTCCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
CDS-3UTR CAA 90 bp ATAGGTGTGGGTAAGGGAGAAGCTTGGGATGGAATGTCCCCTATCCCTCAGAAGCCCAAGGGGAAGGTATaGTCTGGAACCAGAAGCACC +
Preference number: 5 (lower is better)
Translates to: IGVGKGEAWDGMSPIPQKPKGKV*SGTRST
Trigger: GGTGCTTCTGGTTCCAGACAATACCTTCCCCTTGGG...CTTCTGAGGGATAGGGGACATTCCATCCCAAGCTTCTCCCTTACCCACACCTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572382.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
CDS-3UTR CAA 90 bp GGTGTGGGTAAGGGAGAAGCTTGGGATGGAATGTCCCCTATCCCTCAGAAGACTTTGAGTTTCTTCCTCTaGGTCTTCGTCCCCAGGACC +
Preference number: 5 (lower is better)
Translates to: GVGKGEAWDGMSPIPQKTLSFFL*VFVPRT
Trigger: GGTCCTGGGGACGAAGACCAAGAGGAAGAAACTCAA...AGTCTTCTGAGGGATAGGGGACATTCCATCCCAAGCTTCTCCCTTACCCACACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572382.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
ENST00000576965.1
CDS-3UTR CAA 90 bp AAGGGAGAAGCTTGGGATGGAATGTCCCCTATCCCTCAGAAGACTGGAGGGAAGTTGAGTTTCTTCCTCTaGGTCTTCGTCCCCAGGACC +
Preference number: 5 (lower is better)
Translates to: KGEAWDGMSPIPQKTGGKLSFFL*VFVPRT
Trigger: GGTCCTGGGGACGAAGACCAAGAGGAAGAAACTCAA...CTTCCCTCCAGTCTTCTGAGGGATAGGGGACATTCCATCCCAAGCTTCTCCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572382.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
ENST00000576965.1
CDS-3UTR CAA 90 bp GGTAAGGGAGAAGCTTGGGATGGAATGTCCCCTATCCCTCAGAAGACTGGAGGGTTCATCACCCTCCTCTaGCCCTTGAGTTTCTTCCTC +
Preference number: 5 (lower is better)
Translates to: GKGEAWDGMSPIPQKTGGFITLL*PLSFFL
Trigger: GAGGAAGAAACTCAAGGGCAAGAGGAGGGTGATGAA...CCCTCCAGTCTTCTGAGGGATAGGGGACATTCCATCCCAAGCTTCTCCCTTACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572382.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
ENST00000576965.1
CDS-3UTR CAA 90 bp TGGGATGGAATGTCCCCTATCCCTCAGAAGACTGGAGGGAAGACGACGGTCTGTTTCATCACCCTCCTCTaGCCCTTGAGTTTCTTCCTC +
Preference number: 5 (lower is better)
Translates to: WDGMSPIPQKTGGKTTVCFITLL*PLSFFL
Trigger: GAGGAAGAAACTCAAGGGCAAGAGGAGGGTGATGAA...ACAGACCGTCGTCTTCCCTCCAGTCTTCTGAGGGATAGGGGACATTCCATCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572382.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
ENST00000576965.1
CDS-3UTR CAA 90 bp GGTAGGCATGAGCACAGGGGAGTACCCGCAGCTTGTCCCCATCCTCATATTCATTTCATCACCCTCCTCTaGCCCTTGAGTTTCTTCCTC +
Preference number: 5 (lower is better)
Translates to: GRHEHRGVPAACPHPHIHFITLL*PLSFFL
Trigger: GAGGAAGAAACTCAAGGGCAAGAGGAGGGTGATGAA...ATGAATATGAGGATGGGGACAAGCTGCGGGTACTCCCCTGTGCTCATGCCTACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000575400.5
CDS-3UTR CAA 90 bp GATGGAATGTCCCCTATCCCTCAGAAGACTGGAGGGAAGACGACGGTCTGTGCAACAGTGGGGGATCTGTaGAAGGCCCAGGAAAAACAA +
Preference number: 5 (lower is better)
Translates to: DGMSPIPQKTGGKTTVCATVGDL*KAQEKQ
Trigger: TTGTTTTTCCTGGGCCTTCAACAGATCCCCCACTGT...TGCACAGACCGTCGTCTTCCCTCCAGTCTTCTGAGGGATAGGGGACATTCCATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572382.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
ENST00000576965.1
CDS-3UTR CAA 90 bp TCCCTCAGAAGACTGGAGGGAAGACGACGGTCTGTGCAAATAGGTCACCAGAGGACAGTGGGGGATCTGTaGAAGGCCCAGGAAAAACAA +
Preference number: 5 (lower is better)
Translates to: SLRRLEGRRRSVQIGHQRTVGDL*KAQEKQ
Trigger: TTGTTTTTCCTGGGCCTTCAACAGATCCCCCACTGT...CCTCTGGTGACCTATTTGCACAGACCGTCGTCTTCCCTCCAGTCTTCTGAGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572382.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
ENST00000576965.1
CDS-3UTR CAA 90 bp TTGGGATGGAATGTCCCCTATCCCTCAGAAGACTGGAGGGAAGACGACGGTCTGACAGTGGGGGATCTGTaGAAGGCCCAGGAAAAACAA +
Preference number: 5 (lower is better)
Translates to: LGWNVPYPSEDWREDDGLTVGDL*KAQEKQ
Trigger: TTGTTTTTCCTGGGCCTTCAACAGATCCCCCACTGT...CAGACCGTCGTCTTCCCTCCAGTCTTCTGAGGGATAGGGGACATTCCATCCCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572382.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
ENST00000576965.1
CDS-3UTR CAA 90 bp TGTCCCCTATCCCTCAGAAGACTGGAGGGAAGACGACGGTCTGTGCAAATAGGTTGGGCATTTAGGACCTaGAGGTCAAAGTTGCAGTCG +
Preference number: 5 (lower is better)
Translates to: CPLSLRRLEGRRRSVQIGWAFRT*RSKLQS
Trigger: CGACTGCAACTTTGACCTCAAGGTCCTAAATGCCCA...ACCTATTTGCACAGACCGTCGTCTTCCCTCCAGTCTTCTGAGGGATAGGGGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
CDS-3UTR CAA 90 bp GTGTGGGTAAGGGAGAAGCTTGGGATGGAATGTCCCCTATCCCTCAGAAGACTGTGGGCATTTAGGACCTaGAGGTCAAAGTTGCAGTCG +
Preference number: 5 (lower is better)
Translates to: VWVREKLGMECPLSLRRLWAFRT*RSKLQS
Trigger: CGACTGCAACTTTGACCTCAAGGTCCTAAATGCCCA...CAGTCTTCTGAGGGATAGGGGACATTCCATCCCAAGCTTCTCCCTTACCCACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
CDS-3UTR CAA 90 bp TGGAATGTCCCCTATCCCTCAGAAGACTGGAGGGAAGACGACGGTCTGTGCAAATGGGCATTTAGGACCTaGAGGTCAAAGTTGCAGTCG +
Preference number: 5 (lower is better)
Translates to: WNVPYPSEDWREDDGLCKWAFRT*RSKLQS
Trigger: CGACTGCAACTTTGACCTCAAGGTCCTAAATGCCCA...TTTGCACAGACCGTCGTCTTCCCTCCAGTCTTCTGAGGGATAGGGGACATTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
CDS-3UTR CAA 90 bp GCTTGGGATGGAATGTCCCCTATCCCTCAGAAGACTGGAGGGAAGACGACGGTCTCATTGGAATTCACATaGTGTACTACAGCGGCACCA +
Preference number: 5 (lower is better)
Translates to: AWDGMSPIPQKTGGKTTVSLEFT*CTTAAP
Trigger: TGGTGCCGCTGTAGTACACAATGTGAATTCCAATGA...GACCGTCGTCTTCCCTCCAGTCTTCTGAGGGATAGGGGACATTCCATCCCAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
CDS-3UTR CAA 90 bp CCCTTGAGTTTCTTCCTCTTGGTCTTCGTCCCCAGGACCCCGATGAACAGGCTGTCATTGGAATTCACATaGTGTACTACAGCGGCACCA +
Preference number: 5 (lower is better)
Translates to: PLSFFLLVFVPRTPMNRLSLEFT*CTTAAP
Trigger: TGGTGCCGCTGTAGTACACAATGTGAATTCCAATGA...CAGCCTGTTCATCGGGGTCCTGGGGACGAAGACCAAGAGGAAGAAACTCAAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000575400.5
CDS-3UTR CAA 90 bp AAAAGGATAGGTGTGGGTAAGGGAGAAGCTTGGGATGGAATGTCCCCTATCCCTCCCAAGGGGAAGGTATaGTCTGGAACCAGAAGCACC +
Preference number: 5 (lower is better)
Translates to: KRIGVGKGEAWDGMSPIPPKGKV*SGTRST
Trigger: GGTGCTTCTGGTTCCAGACAATACCTTCCCCTTGGG...AGGGATAGGGGACATTCCATCCCAAGCTTCTCCCTTACCCACACCTATCCTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572382.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
CDS-3UTR CAA 90 bp GAAGCTTGGGATGGAATGTCCCCTATCCCTCAGAAGACTGGAGGGAAGACGACGTGTTTCAGTTGCTCTTaGGTAAGTCGATTCCGCTGG +
Preference number: 5 (lower is better)
Translates to: EAWDGMSPIPQKTGGKTTCFSCS*VSRFRW
Trigger: CCAGCGGAATCGACTTACCAAAGAGCAACTGAAACA...CGTCGTCTTCCCTCCAGTCTTCTGAGGGATAGGGGACATTCCATCCCAAGCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572382.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
CDS-3UTR CAA 90 bp ATAGGTGTGGGTAAGGGAGAAGCTTGGGATGGAATGTCCCCTATCCCTCAGAAGTTGAGTTTCTTCCTCTaGGTCTTCGTCCCCAGGACC +
Preference number: 5 (lower is better)
Translates to: IGVGKGEAWDGMSPIPQKLSFFL*VFVPRT
Trigger: GGTCCTGGGGACGAAGACCAAGAGGAAGAAACTCAA...CTTCTGAGGGATAGGGGACATTCCATCCCAAGCTTCTCCCTTACCCACACCTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572382.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
ENST00000576965.1
CDS-3UTR CAA 90 bp ATCCCTCAGAAGACTGGAGGGAAGACGACGGTCTGTGCAAATAGGTCACCAGAGTTCATCACCCTCCTCTaGCCCTTGAGTTTCTTCCTC +
Preference number: 5 (lower is better)
Translates to: IPQKTGGKTTVCANRSPEFITLL*PLSFFL
Trigger: GAGGAAGAAACTCAAGGGCAAGAGGAGGGTGATGAA...CTCTGGTGACCTATTTGCACAGACCGTCGTCTTCCCTCCAGTCTTCTGAGGGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572382.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
ENST00000576965.1
CDS-3UTR CAA 90 bp GGTGTGGGTAAGGGAGAAGCTTGGGATGGAATGTCCCCTATCCCTCAGAAGACTTTCATCACCCTCCTCTaGCCCTTGAGTTTCTTCCTC +
Preference number: 5 (lower is better)
Translates to: GVGKGEAWDGMSPIPQKTFITLL*PLSFFL
Trigger: GAGGAAGAAACTCAAGGGCAAGAGGAGGGTGATGAA...AGTCTTCTGAGGGATAGGGGACATTCCATCCCAAGCTTCTCCCTTACCCACACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572382.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
ENST00000576965.1
CDS-3UTR CAA 90 bp AGAAGCTTGGGATGGAATGTCCCCTATCCCTCAGAAGACTGGAGGGAAGACGACTTCATCACCCTCCTCTaGCCCTTGAGTTTCTTCCTC +
Preference number: 5 (lower is better)
Translates to: RSLGWNVPYPSEDWREDDFITLL*PLSFFL
Trigger: GAGGAAGAAACTCAAGGGCAAGAGGAGGGTGATGAA...GTCGTCTTCCCTCCAGTCTTCTGAGGGATAGGGGACATTCCATCCCAAGCTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572382.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
ENST00000576965.1
CDS-3UTR CAA 90 bp CCTATCCCTCAGAAGACTGGAGGGAAGACGACGGTCTGTGCAAATAGGTCACCAACAGTGGGGGATCTGTaGAAGGCCCAGGAAAAACAA +
Preference number: 5 (lower is better)
Translates to: PIPQKTGGKTTVCANRSPTVGDL*KAQEKQ
Trigger: TTGTTTTTCCTGGGCCTTCAACAGATCCCCCACTGT...TGGTGACCTATTTGCACAGACCGTCGTCTTCCCTCCAGTCTTCTGAGGGATAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572382.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
ENST00000576965.1
CDS-3UTR CAA 90 bp GTGTGGGTAAGGGAGAAGCTTGGGATGGAATGTCCCCTATCCCTCAGAAGACTGACAGTGGGGGATCTGTaGAAGGCCCAGGAAAAACAA +
Preference number: 5 (lower is better)
Translates to: VWVREKLGMECPLSLRRLTVGDL*KAQEKQ
Trigger: TTGTTTTTCCTGGGCCTTCAACAGATCCCCCACTGT...CAGTCTTCTGAGGGATAGGGGACATTCCATCCCAAGCTTCTCCCTTACCCACAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572382.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
ENST00000576965.1
CDS CCA 90 bp TGTGTAGGAATCTGTTTCAGTTGCTCTTTGGTAAGTCGATTCCGCTaGAGCCGTTTCCGGTGCTGGATACAACGAGCTATCTGGGGGAAG +
Preference number: 5 (lower is better)
Translates to: CVGICFSCSLVSRFR*SRFRCWIQRAIWGK
Trigger: CTTCCCCCAGATAGCTCGTTGTATCCAGCACCGGAAACGGCTCCAGCGGAATCGACTTACCAAAGAGCAACTGAAACAGATTCCTACACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000575524.1
CDS-3UTR CAA 90 bp CCTATCCCTCAGAAGACTGGAGGGAAGACGACGGTCTGTGCAAATAGGTCACCAACCTTGAGGTCAAAGTaGCAGTCGAATCTTCGAAGC +
Preference number: 5 (lower is better)
Translates to: PIPQKTGGKTTVCANRSPTLRSK*QSNLRS
Trigger: GCTTCGAAGATTCGACTGCAACTTTGACCTCAAGGT...TGGTGACCTATTTGCACAGACCGTCGTCTTCCCTCCAGTCTTCTGAGGGATAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
CDS-3UTR CAA 90 bp AGAAGCTTGGGATGGAATGTCCCCTATCCCTCAGAAGACTGGAGGGAAGACGACACCTTGAGGTCAAAGTaGCAGTCGAATCTTCGAAGC +
Preference number: 5 (lower is better)
Translates to: RSLGWNVPYPSEDWREDDTLRSK*QSNLRS
Trigger: GCTTCGAAGATTCGACTGCAACTTTGACCTCAAGGT...GTCGTCTTCCCTCCAGTCTTCTGAGGGATAGGGGACATTCCATCCCAAGCTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
CDS-3UTR CAA 90 bp TGGAATGTCCCCTATCCCTCAGAAGACTGGAGGGAAGACGACGGTCTGTGCAAAACCTTGAGGTCAAAGTaGCAGTCGAATCTTCGAAGC +
Preference number: 5 (lower is better)
Translates to: WNVPYPSEDWREDDGLCKTLRSK*QSNLRS
Trigger: GCTTCGAAGATTCGACTGCAACTTTGACCTCAAGGT...TTTGCACAGACCGTCGTCTTCCCTCCAGTCTTCTGAGGGATAGGGGACATTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
CDS-3UTR CAA 90 bp AGGATAGGTGTGGGTAAGGGAGAAGCTTGGGATGGAATGTCCCCTATCCCTCAGACCTTGAGGTCAAAGTaGCAGTCGAATCTTCGAAGC +
Preference number: 5 (lower is better)
Translates to: RIGVGKGEAWDGMSPIPQTLRSK*QSNLRS
Trigger: GCTTCGAAGATTCGACTGCAACTTTGACCTCAAGGT...CTGAGGGATAGGGGACATTCCATCCCAAGCTTCTCCCTTACCCACACCTATCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
CDS-3UTR CAA 90 bp ATAGGTGTGGGTAAGGGAGAAGCTTGGGATGGAATGTCCCCTATCCCTCAGAAGTGGGCATTTAGGACCTaGAGGTCAAAGTTGCAGTCG +
Preference number: 5 (lower is better)
Translates to: IGVGKGEAWDGMSPIPQKWAFRT*RSKLQS
Trigger: CGACTGCAACTTTGACCTCAAGGTCCTAAATGCCCA...CTTCTGAGGGATAGGGGACATTCCATCCCAAGCTTCTCCCTTACCCACACCTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
CDS-3UTR CAA 90 bp GAGAAGCTTGGGATGGAATGTCCCCTATCCCTCAGAAGACTGGAGGGAAGACGATGTTTCAGTTGCTCTTaGGTAAGTCGATTCCGCTGG +
Preference number: 5 (lower is better)
Translates to: EKLGMECPLSLRRLEGRRCFSCS*VSRFRW
Trigger: CCAGCGGAATCGACTTACCAAAGAGCAACTGAAACA...TCGTCTTCCCTCCAGTCTTCTGAGGGATAGGGGACATTCCATCCCAAGCTTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572382.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
CDS-3UTR CAA 90 bp ATCCCTCAGAAGACTGGAGGGAAGACGACGGTCTGTGCAAATAGGTCACCAGAGTGTTTCAGTTGCTCTTaGGTAAGTCGATTCCGCTGG +
Preference number: 5 (lower is better)
Translates to: IPQKTGGKTTVCANRSPECFSCS*VSRFRW
Trigger: CCAGCGGAATCGACTTACCAAAGAGCAACTGAAACA...CTCTGGTGACCTATTTGCACAGACCGTCGTCTTCCCTCCAGTCTTCTGAGGGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572382.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
CDS-3UTR CAA 90 bp CTATCCCTCAGAAGACTGGAGGGAAGACGACGGTCTGTGCAAATAGGTCACCAGTGTTTCAGTTGCTCTTaGGTAAGTCGATTCCGCTGG +
Preference number: 5 (lower is better)
Translates to: LSLRRLEGRRRSVQIGHQCFSCS*VSRFRW
Trigger: CCAGCGGAATCGACTTACCAAAGAGCAACTGAAACA...CTGGTGACCTATTTGCACAGACCGTCGTCTTCCCTCCAGTCTTCTGAGGGATAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572382.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
CDS-3UTR CAA 90 bp AAGGGAGAAGCTTGGGATGGAATGTCCCCTATCCCTCAGAAGACTGGAGGGAAGTGTTTCAGTTGCTCTTaGGTAAGTCGATTCCGCTGG +
Preference number: 5 (lower is better)
Translates to: KGEAWDGMSPIPQKTGGKCFSCS*VSRFRW
Trigger: CCAGCGGAATCGACTTACCAAAGAGCAACTGAAACA...CTTCCCTCCAGTCTTCTGAGGGATAGGGGACATTCCATCCCAAGCTTCTCCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572382.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
CDS-3UTR CAA 90 bp TGGAATGTCCCCTATCCCTCAGAAGACTGGAGGGAAGACGACGGTCTGTGCAAATGTTTCAGTTGCTCTTaGGTAAGTCGATTCCGCTGG +
Preference number: 5 (lower is better)
Translates to: WNVPYPSEDWREDDGLCKCFSCS*VSRFRW
Trigger: CCAGCGGAATCGACTTACCAAAGAGCAACTGAAACA...TTTGCACAGACCGTCGTCTTCCCTCCAGTCTTCTGAGGGATAGGGGACATTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572382.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
CDS-3UTR CAA 90 bp GAGAAGCTTGGGATGGAATGTCCCCTATCCCTCAGAAGACTGGAGGGAAGACGATCATTGGAATTCACATaGTGTACTACAGCGGCACCA +
Preference number: 5 (lower is better)
Translates to: EKLGMECPLSLRRLEGRRSLEFT*CTTAAP
Trigger: TGGTGCCGCTGTAGTACACAATGTGAATTCCAATGA...TCGTCTTCCCTCCAGTCTTCTGAGGGATAGGGGACATTCCATCCCAAGCTTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
CDS-3UTR CAA 90 bp GTGTGGGTAAGGGAGAAGCTTGGGATGGAATGTCCCCTATCCCTCAGAAGACTGTCATTGGAATTCACATaGTGTACTACAGCGGCACCA +
Preference number: 5 (lower is better)
Translates to: VWVREKLGMECPLSLRRLSLEFT*CTTAAP
Trigger: TGGTGCCGCTGTAGTACACAATGTGAATTCCAATGA...CAGTCTTCTGAGGGATAGGGGACATTCCATCCCAAGCTTCTCCCTTACCCACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
CDS-3UTR CAA 90 bp GCTTGGGATGGAATGTCCCCTATCCCTCAGAAGACTGGAGGGAAGACGACGGTCAGGAATCTGTTTCAGTaGCTCTTTGGTAAGTCGATT +
Preference number: 5 (lower is better)
Translates to: AWDGMSPIPQKTGGKTTVRNLFQ*LFGKSI
Trigger: AATCGACTTACCAAAGAGCAACTGAAACAGATTCCT...GACCGTCGTCTTCCCTCCAGTCTTCTGAGGGATAGGGGACATTCCATCCCAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572382.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
CDS-3UTR CAA 90 bp AAAAGGATAGGTGTGGGTAAGGGAGAAGCTTGGGATGGAATGTCCCCTATCCCTTTCATCACCCTCCTCTaGCCCTTGAGTTTCTTCCTC +
Preference number: 5 (lower is better)
Translates to: KRIGVGKGEAWDGMSPIPFITLL*PLSFFL
Trigger: GAGGAAGAAACTCAAGGGCAAGAGGAGGGTGATGAA...AGGGATAGGGGACATTCCATCCCAAGCTTCTCCCTTACCCACACCTATCCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572382.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
ENST00000576965.1
CDS-3UTR CAA 90 bp CTCAAAAGGATAGGTGTGGGTAAGGGAGAAGCTTGGGATGGAATGTCCCCTATCACAGTGGGGGATCTGTaGAAGGCCCAGGAAAAACAA +
Preference number: 5 (lower is better)
Translates to: LKRIGVGKGEAWDGMSPITVGDL*KAQEKQ
Trigger: TTGTTTTTCCTGGGCCTTCAACAGATCCCCCACTGT...GATAGGGGACATTCCATCCCAAGCTTCTCCCTTACCCACACCTATCCTTTTGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 7 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572382.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
ENST00000576965.1
CDS-3UTR CAA 90 bp AAAAGGATAGGTGTGGGTAAGGGAGAAGCTTGGGATGGAATGTCCCCTATCCCTACCTTGAGGTCAAAGTaGCAGTCGAATCTTCGAAGC +
Preference number: 5 (lower is better)
Translates to: KRIGVGKGEAWDGMSPIPTLRSK*QSNLRS
Trigger: GCTTCGAAGATTCGACTGCAACTTTGACCTCAAGGT...AGGGATAGGGGACATTCCATCCCAAGCTTCTCCCTTACCCACACCTATCCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
CDS-3UTR CAA 90 bp CAGAAGACTGGAGGGAAGACGACGGTCTGTGCAAATAGGTCACCAGAGGTGTATTCATTGGAATTCACATaGTGTACTACAGCGGCACCA +
Preference number: 5 (lower is better)
Translates to: QKTGGKTTVCANRSPEVYSLEFT*CTTAAP
Trigger: TGGTGCCGCTGTAGTACACAATGTGAATTCCAATGA...ATACACCTCTGGTGACCTATTTGCACAGACCGTCGTCTTCCCTCCAGTCTTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
CDS-3UTR CAA 90 bp TGGGATGGAATGTCCCCTATCCCTCAGAAGACTGGAGGGAAGACGACGGTCTGTAGGAATCTGTTTCAGTaGCTCTTTGGTAAGTCGATT +
Preference number: 5 (lower is better)
Translates to: WDGMSPIPQKTGGKTTVCRNLFQ*LFGKSI
Trigger: AATCGACTTACCAAAGAGCAACTGAAACAGATTCCT...ACAGACCGTCGTCTTCCCTCCAGTCTTCTGAGGGATAGGGGACATTCCATCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572382.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
CDS-3UTR CAA 90 bp TCCCTCAGAAGACTGGAGGGAAGACGACGGTCTGTGCAAATAGGTCACCAGAGGAGGAATCTGTTTCAGTaGCTCTTTGGTAAGTCGATT +
Preference number: 5 (lower is better)
Translates to: SLRRLEGRRRSVQIGHQRRNLFQ*LFGKSI
Trigger: AATCGACTTACCAAAGAGCAACTGAAACAGATTCCT...CCTCTGGTGACCTATTTGCACAGACCGTCGTCTTCCCTCCAGTCTTCTGAGGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572382.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
CDS-3UTR CAA 90 bp GAAGCTTGGGATGGAATGTCCCCTATCCCTCAGAAGACTGGAGGGAAGACGACGAGGAATCTGTTTCAGTaGCTCTTTGGTAAGTCGATT +
Preference number: 5 (lower is better)
Translates to: EAWDGMSPIPQKTGGKTTRNLFQ*LFGKSI
Trigger: AATCGACTTACCAAAGAGCAACTGAAACAGATTCCT...CGTCGTCTTCCCTCCAGTCTTCTGAGGGATAGGGGACATTCCATCCCAAGCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572382.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
CDS CCA 90 bp TGTGTAGGAATCTGTTTCAGTTGCTCTTTGGTAAGTCGATTCCGCTaGAGCCGTTTCCGGTGCTGGATACAACGAGCTATCATTACTGCT +
Preference number: 5 (lower is better)
Translates to: CVGICFSCSLVSRFR*SRFRCWIQRAIITA
Trigger: AGCAGTAATGATAGCTCGTTGTATCCAGCACCGGAAACGGCTCCAGCGGAATCGACTTACCAAAGAGCAACTGAAACAGATTCCTACACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572382.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
CDS-3UTR CAA 90 bp AAAAGGATAGGTGTGGGTAAGGGAGAAGCTTGGGATGGAATGTCCCCTATCCCTTCATTGGAATTCACATaGTGTACTACAGCGGCACCA +
Preference number: 5 (lower is better)
Translates to: KRIGVGKGEAWDGMSPIPSLEFT*CTTAAP
Trigger: TGGTGCCGCTGTAGTACACAATGTGAATTCCAATGA...AGGGATAGGGGACATTCCATCCCAAGCTTCTCCCTTACCCACACCTATCCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
CDS-3UTR CAA 90 bp AAGGGAGAAGCTTGGGATGGAATGTCCCCTATCCCTCAGAAGACTGGAGGGAAGAGGAATCTGTTTCAGTaGCTCTTTGGTAAGTCGATT +
Preference number: 5 (lower is better)
Translates to: KGEAWDGMSPIPQKTGGKRNLFQ*LFGKSI
Trigger: AATCGACTTACCAAAGAGCAACTGAAACAGATTCCT...CTTCCCTCCAGTCTTCTGAGGGATAGGGGACATTCCATCCCAAGCTTCTCCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572382.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
CDS CCA 90 bp GCTGCTGGATTTCCTCACTATTCCACACCATGTTCAGAAGTTCATTaGAATTCACATTGTGTACTACAGCGGCACCATATCCAGCCTTCT +
Preference number: 5 (lower is better)
Translates to: AAGFPHYSTPCSEVH*NSHCVLQRHHIQPS
Trigger: AGAAGGCTGGATATGGTGCCGCTGTAGTACACAATGTGAATTCCAATGAACTTCTGAACATGGTGTGGAATAGTGAGGAAATCCAGCAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000262482.11
ENST00000570492.5
ENST00000571816.5
ENST00000572430.5
ENST00000572554.1
ENST00000575111.5
ENST00000575400.5
ENST00000576229.5
CDS TCA 90 bp ACCTTCAAACAAACTCTTCTCTATTTTCCCGCGATTCTAATTCGGTaGAAACAGCGCCTTTCCTCTGGTTTCCAAATCAGTTACGCCCCT +
Preference number: 5 (lower is better)
Translates to: TFKQTLLYFPAILIR*KQRLSSGFQISYAP
Trigger: AGGGGCGTAACTGATTTGGAAACCAGAGGAAAGGCGCTGTTTTCACCGAATTAGAATCGCGGGAAAATAGAGAAGAGTTTGTTTGAAGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000571365.1
ENST00000571816.5
ENST00000572430.5
ENST00000573404.5
ENST00000576452.5
CDS GCA 72 bp CCTTCAGCTCCGCCTTACTCCCGGCCGCCTTTGCGCTaGGCGCCTGCGCCCGCGCCGGCTTCCAGCGGGTGT +
Preference number: 6 (lower is better)
Translates to: PSAPPYSRPPLR*APAPAPASSGC
Trigger: ACACCCGCTGGAAGCCGGCGCGGGCGCAGGCGCGCAGCGCAAAGGCGGCCGGGAGTAAGGCGGAGCTGAAGG
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571816.5
CDS TCA 72 bp AGGCTGCAGGGTGCATGGCAGCGGGAGGAAAGAGGCTaGGGAGGCCGCGCGTCCTCTCCTCCCTCTGGCCTC +
Preference number: 6 (lower is better)
Translates to: RLQGAWQREERG*GGRASSPPSGL
Trigger: GAGGCCAGAGGGAGGAGAGGACGCGCGGCCTCCTCAGCCTCTTTCCTCCCGCTGCCATGCACCCTGCAGCCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576452.5
CDS TCA 72 bp GCTGCTTGCAAATGGGGCAGGTCTTCCGGGTCTGAGTaGGCCAGGGGTCCACGCAGCGGCTGTGGTAGGCCC +
Preference number: 6 (lower is better)
Translates to: AACKWGRSSGSE*ARGPRSGCGRP
Trigger: GGGCCTACCACAGCCGCTGCGTGGACCCCTGGCTCACTCAGACCCGGAAGACCTGCCCCATTTGCAAGCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000576965.1
CDS TCA 72 bp AGGCTGCAGGGTGCATGGCAGCGGGAGGAAAGAGGCTaGGGAGGCCGCGCGTCTCGATCTCGCGAGACCTTC +
Preference number: 6 (lower is better)
Translates to: RLQGAWQREERG*GGRASRSRETF
Trigger: GAAGGTCTCGCGAGATCGAGACGCGCGGCCTCCTCAGCCTCTTTCCTCCCGCTGCCATGCACCCTGCAGCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573404.5
CDS TCA 72 bp AGGCTGCAGGGTGCATGGCAGCGGGAGGAAAGAGGCTaGGGAGGCCGCGCGTCCCGTTTAGTGGAGCTGGGT +
Preference number: 6 (lower is better)
Translates to: RLQGAWQREERG*GGRASRLVELG
Trigger: ACCCAGCTCCACTAAACGGGACGCGCGGCCTCCTCAGCCTCTTTCCTCCCGCTGCCATGCACCCTGCAGCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571816.5
CDS TCA 72 bp GCTGCTTGCAAATGGGGCAGGTCTTCCGGGTCTGAGTaGGCCAGGGGTCCACGCAGCGGCTGTGGTAGGCTG +
Preference number: 6 (lower is better)
Translates to: AACKWGRSSGSE*ARGPRSGCGRL
Trigger: CAGCCTACCACAGCCGCTGCGTGGACCCCTGGCTCACTCAGACCCGGAAGACCTGCCCCATTTGCAAGCAGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572382.5
CDS GCA 72 bp GTAGCAAGGAGCAGAAGCGGAGTTCTGCGCCCTCCCTaGCCCTCCTTTAGGATCCCAGGGGTCCAACCACCC +
Preference number: 6 (lower is better)
Translates to: VARSRSGVLRPP*PSFRIPGVQPP
Trigger: GGGTGGTTGGACCCCTGGGATCCTAAAGGAGGGGCAGGGAGGGCGCAGAACTCCGCTTCTGCTCCTTGCTAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262482.11
ENST00000570492.5
ENST00000575111.5
ENST00000575400.5
CDS CCA 72 bp GTGGCGGAGCTCAAGGAGGTGGGACTTCCTGCTAGGTaGGCCGTGTTCCCAGCCTCTGGAAAAGGGCTTCCG +
Preference number: 6 (lower is better)
Translates to: VAELKEVGLPAR*AVFPASGKGLP
Trigger: CGGAAGCCCTTTTCCAGAGGCTGGGAACACGGCCCACCTAGCAGGAAGTCCCACCTCCTTGAGCTCCGCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262482.11
ENST00000571365.1
ENST00000571816.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
CDS CCA 72 bp GAAAAACTTCGGGAAGGGTGGCGGAGCTCAAGGAGGTaGGACTTCCTGCTAGGTGGGCCGTGTTCCCAGCCT +
Preference number: 6 (lower is better)
Translates to: EKLREGWRSSRR*DFLLGGPCSQP
Trigger: AGGCTGGGAACACGGCCCACCTAGCAGGAAGTCCCACCTCCTTGAGCTCCGCCACCCTTCCCGAAGTTTTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000262482.11
ENST00000571365.1
ENST00000571816.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
CDS TCA 72 bp CGAGAGTGCTCACCACCTCTCCCGTCCCCTCGCAGCTaGATAGTTGCTGTGTCTATCGCGAGAGCGCTCCAA +
Preference number: 6 (lower is better)
Translates to: RECSPPLPSPRS*IVAVSIARALQ
Trigger: TTGGAGCGCTCTCGCGATAGACACAGCAACTATTCAGCTGCGAGGGGACGGGAGAGGTGGTGAGCACTCTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576452.5
CDS CCA 72 bp CCCCAAACAGAGCTGGAAGGTCTGCAAAGTCCATGCTaGCATTGTGGTCCGAGGTCTCTCCTCCCTCTGGCC +
Preference number: 6 (lower is better)
Translates to: PQTELEGLQSPC*HCGPRSLLPLA
Trigger: GGCCAGAGGGAGGAGAGACCTCGGACCACAATGCCAGCATGGACTTTGCAGACCTTCCAGCTCTGTTTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570328.5
CDS CCA 72 bp CGCGCGTCACAGGTGACAGAAAAACTTCGGGAAGGGTaGCGGAGCTCAAGGAGGTGGGACTTCCTGCTAGGT +
Preference number: 6 (lower is better)
Translates to: RASQVTEKLREG*RSSRRWDFLLG
Trigger: ACCTAGCAGGAAGTCCCACCTCCTTGAGCTCCGCCACCCTTCCCGAAGTTTTTCTGTCACCTGTGACGCGCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000572430.5
CDS CCA 72 bp TTGGTAAGTCGATTCCGCTGGAGCCGTTTCCGGTGCTaGATACAACGAGCTATCTGGGGGAAGCGGGGGTGG +
Preference number: 6 (lower is better)
Translates to: LVSRFRWSRFRC*IQRAIWGKRGW
Trigger: CCACCCCCGCTTCCCCCAGATAGCTCGTTGTATCCAGCACCGGAAACGGCTCCAGCGGAATCGACTTACCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000575524.1
CDS CCA 72 bp CTGAGGAGGCCGCGCGTCCCGTTTAGTGGAGCTGGGTaGGAGGCACTAAATGTATCCTTTTCTGGTACGGGG +
Preference number: 6 (lower is better)
Translates to: LRRPRVPFSGAG*EALNVSFSGTG
Trigger: CCCCGTACCAGAAAAGGATACATTTAGTGCCTCCCACCCAGCTCCACTAAACGGGACGCGCGGCCTCCTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571816.5
CDS TCA 72 bp TCTGGAACCAGAAGCACCCGAGCCCTGGGAAAAGGATaGCCAGTCTCAGCAGGGCGAGAAAGGCAAAGGGAG +
Preference number: 6 (lower is better)
Translates to: SGTRSTRALGKG*PVSAGRERQRE
Trigger: CTCCCTTTGCCTTTCTCGCCCTGCTGAGACTGGTCATCCTTTTCCCAGGGCTCGGGTGCTTCTGGTTCCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575524.1
CDS GCA 72 bp TCTTTGGTAAGTCGATTCCGCTGGAGCCGTTTCCGGTaGTGGATACAACGAGCTATCTGGGGGAAGCGGGGG +
Preference number: 6 (lower is better)
Translates to: SLVSRFRWSRFR*WIQRAIWGKRG
Trigger: CCCCCGCTTCCCCCAGATAGCTCGTTGTATCCAGCACCGGAAACGGCTCCAGCGGAATCGACTTACCAAAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000575524.1
CDS CCA 72 bp CCACAGGAAGCGGGAAGGCCGTTTAGTGGAGCTGGGTaGGAGGCACTAAATGTATCCTTTTCTGGTACGGGG +
Preference number: 6 (lower is better)
Translates to: PQEAGRPFSGAG*EALNVSFSGTG
Trigger: CCCCGTACCAGAAAAGGATACATTTAGTGCCTCCCACCCAGCTCCACTAAACGGCCTTCCCGCTTCCTGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576229.5
CDS CCA 72 bp AGCCTAACACAGGTGACAGAAAAACTTCGGGAAGGGTaGCGGAGCTCAAGGAGGTGGGACTTCCTGCTAGGT +
Preference number: 6 (lower is better)
Translates to: SLTQVTEKLREG*RSSRRWDFLLG
Trigger: ACCTAGCAGGAAGTCCCACCTCCTTGAGCTCCGCCACCCTTCCCGAAGTTTTTCTGTCACCTGTGTTAGGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000262482.11
ENST00000571365.1
ENST00000571816.5
ENST00000575111.5
ENST00000576229.5
CDS CCA 72 bp AGGGATGAGGTAATAGCCCAAGGGGAAGGTATTGTCTaGAACCAGAAGCACCCGAGCCCCCTTCTCGTAGAC +
Preference number: 6 (lower is better)
Translates to: RDEVIAQGEGIV*NQKHPSPLLVD
Trigger: GTCTACGAGAAGGGGGCTCGGGTGCTTCTGGTTCCAGACAATACCTTCCCCTTGGGCTATTACCTCATCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572382.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
CDS CCA 72 bp AATAGTTGCTGTGTCTATCGCGAGAGCGCTCCAACTTaGCGAGCCGTACTCACTCGATCTCGCGAGACCTTC +
Preference number: 6 (lower is better)
Translates to: NSCCVYRESAPT*RAVLTRSRETF
Trigger: GAAGGTCTCGCGAGATCGAGTGAGTACGGCTCGCCAAGTTGGAGCGCTCTCGCGATAGACACAGCAACTATT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576452.5
CDS CCA 72 bp GGAAGGTATTGTCTGGAACCAGAAGCACCCGAGCCCTaGGAAAAGGATGACCAGTCTCAGCAGGGCGAGAAA +
Preference number: 6 (lower is better)
Translates to: GRYCLEPEAPEP*EKDDQSQQGEK
Trigger: TTTCTCGCCCTGCTGAGACTGGTCATCCTTTTCCCAGGGCTCGGGTGCTTCTGGTTCCAGACAATACCTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575524.1
CDS GCA 72 bp GCTTCCCATCATGTTCCCTCAGCTACTCACCATTACTaGTCCCATGGCCAAAACCAGCAGTCCCACAATCCC +
Preference number: 6 (lower is better)
Translates to: ASHHVPSATHHY*SHGQNQQSHNP
Trigger: GGGATTGTGGGACTGCTGGTTTTGGCCATGGGAGCAGTAATGGTGAGTAGCTGAGGGAACATGATGGGAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575524.1
CDS GCA 72 bp CCAACTCCAGATCCAGTCTGGCCTCACAGGCCTCAGTaGTTCCCATCATGTTCCCTCAGCTACTCACCATTA +
Preference number: 6 (lower is better)
Translates to: PTPDPVWPHRPQ*FPSCSLSYSPL
Trigger: TAATGGTGAGTAGCTGAGGGAACATGATGGGAAGCACTGAGGCCTGTGAGGCCAGACTGGATCTGGAGTTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575524.1
CDS CCA 72 bp TTGGTAAGTCGATTCCGCTGGAGCCGTTTCCGGTGCTaGATACAACGAGCTATCATTACTGCTCCCATGGCC +
Preference number: 6 (lower is better)
Translates to: LVSRFRWSRFRC*IQRAIITAPMA
Trigger: GGCCATGGGAGCAGTAATGATAGCTCGTTGTATCCAGCACCGGAAACGGCTCCAGCGGAATCGACTTACCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572382.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
CDS CCA 72 bp AGGGATGAGGTAATAGCCCAAGGGGAAGGTATTGTCTaGAACCAGAAGCACCCGAGCCCTGGGAAAAGGATG +
Preference number: 6 (lower is better)
Translates to: RDEVIAQGEGIV*NQKHPSPGKRM
Trigger: CATCCTTTTCCCAGGGCTCGGGTGCTTCTGGTTCCAGACAATACCTTCCCCTTGGGCTATTACCTCATCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000575524.1
CDS TCA 72 bp GTAGAGAAAATCAGGCCGCTTTCAGCATTGGATGCTTaGGATGAAGGACTTCCGGTCCTCTCCTCCCTCTGG +
Preference number: 6 (lower is better)
Translates to: VEKIRPLSALDA*DEGLPVLSSLW
Trigger: CCAGAGGGAGGAGAGGACCGGAAGTCCTTCATCTCAAGCATCCAATGCTGAAAGCGGCCTGATTTTCTCTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262482.11
CDS TCA 72 bp GAAAATCAGGCCGCTTTCAGCATTGGATGCTTGAGATaGAGGACTTCCGGTCTCGATCTCGCGAGACCTTCA +
Preference number: 6 (lower is better)
Translates to: ENQAAFSIGCLR*RTSGLDLARPS
Trigger: TGAAGGTCTCGCGAGATCGAGACCGGAAGTCCTTCATCTCAAGCATCCAATGCTGAAAGCGGCCTGATTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000571365.1
ENST00000571816.5
ENST00000572430.5
CDS TCA 72 bp GTAGAGAAAATCAGGCCGCTTTCAGCATTGGATGCTTaGGATGAAGGACTTCCGGTCTCGATCTCGCGAGAC +
Preference number: 6 (lower is better)
Translates to: VEKIRPLSALDA*DEGLPVSISRD
Trigger: GTCTCGCGAGATCGAGACCGGAAGTCCTTCATCTCAAGCATCCAATGCTGAAAGCGGCCTGATTTTCTCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000571365.1
ENST00000571816.5
ENST00000572430.5
CDS GCA 72 bp TCTTTGGTAAGTCGATTCCGCTGGAGCCGTTTCCGGTaGTGGATACAACGAGCTATCATTACTGCTCCCATG +
Preference number: 6 (lower is better)
Translates to: SLVSRFRWSRFR*WIQRAIITAPM
Trigger: CATGGGAGCAGTAATGATAGCTCGTTGTATCCAGCACCGGAAACGGCTCCAGCGGAATCGACTTACCAAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572382.5
ENST00000572430.5
ENST00000575111.5
ENST00000576229.5
CDS CCA 72 bp CGCGATTCTAATTCGGTGAAAACAGCGCCTTTCCTCTaGTTTCCAAATCAGTTACGCCCCTTCTCGCACGCT +
Preference number: 6 (lower is better)
Translates to: RDSNSVKTAPFL*FPNQLRPFSHA
Trigger: AGCGTGCGAGAAGGGGCGTAACTGATTTGGAAACCAGAGGAAAGGCGCTGTTTTCACCGAATTAGAATCGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000571365.1
ENST00000571816.5
ENST00000573404.5
ENST00000576452.5
CDS CCA 72 bp ATCTGTTTCAGTTGCTCTTTGGTAAGTCGATTCCGCTaGAGCCGTTTCCGGTGCTGGATACAACGAGCTATC +
Preference number: 6 (lower is better)
Translates to: ICFSCSLVSRFR*SRFRCWIQRAI
Trigger: GATAGCTCGTTGTATCCAGCACCGGAAACGGCTCCAGCGGAATCGACTTACCAAAGAGCAACTGAAACAGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572382.5
ENST00000572430.5
ENST00000575111.5
ENST00000575524.1
ENST00000576229.5
CDS CAA 90 bp ATACTGGTCTCCCTTCTGATAGTCATGTGTAGGAATCTGTTTCAGTaGCTCTTTGGTAAGTCGATTCCGCTGGAGCCGTTTCCGGTGCTG +
Preference number: 6 (lower is better)
Translates to: ILVSLLIVMCRNLFQ*LFGKSIPLEPFPVL
Trigger: CAGCACCGGAAACGGCTCCAGCGGAATCGACTTACCAAAGAGCAACTGAAACAGATTCCTACACATGACTATCAGAAGGGAGACCAGTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572382.5
ENST00000572430.5
ENST00000575111.5
ENST00000575524.1
ENST00000576229.5
CDS TCA 72 bp GTAGAGAAAATCAGGCCGCTTTCAGCATTGGATGCTTaGGATGAAGGACTTCCGGTCCTAAAAGGCCGGTTA +
Preference number: 6 (lower is better)
Translates to: VEKIRPLSALDA*DEGLPVLKGRL
Trigger: TAACCGGCCTTTTAGGACCGGAAGTCCTTCATCTCAAGCATCCAATGCTGAAAGCGGCCTGATTTTCTCTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000575111.5
CDS CCA 72 bp AAGAATGAGATATCCAACCCGTTTAGTGGAGCTGGGTaGGAGGCACTAAATGTATCCTTTTCTGGTACGGGG +
Preference number: 6 (lower is better)
Translates to: KNEISNPFSGAG*EALNVSFSGTG
Trigger: CCCCGTACCAGAAAAGGATACATTTAGTGCCTCCCACCCAGCTCCACTAAACGGGTTGGATATCTCATTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262482.11
ENST00000570492.5
ENST00000571365.1
ENST00000575111.5
ENST00000575400.5
CDS GCA 72 bp CTCTCCCCAATAAATACAGACGGGATCCAGATCTGCTaGTGGATTTCCTCACTATTCCACACCATGTTCAGA +
Preference number: 6 (lower is better)
Translates to: LSPINTDGIQIC*WISSLFHTMFR
Trigger: TCTGAACATGGTGTGGAATAGTGAGGAAATCCAGCAGCAGATCTGGATCCCGTCTGTATTTATTGGGGAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000262482.11
ENST00000570492.5
ENST00000571816.5
ENST00000572382.5
ENST00000572430.5
ENST00000572554.1
ENST00000575111.5
ENST00000575400.5
ENST00000576229.5
CDS GCA 72 bp CTTCTCTCCCCAATAAATACAGACGGGATCCAGATCTaGTGCTGGATTTCCTCACTATTCCACACCATGTTC +
Preference number: 6 (lower is better)
Translates to: LLSPINTDGIQI*CWISSLFHTMF
Trigger: GAACATGGTGTGGAATAGTGAGGAAATCCAGCAGCAGATCTGGATCCCGTCTGTATTTATTGGGGAGAGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000262482.11
ENST00000570492.5
ENST00000571816.5
ENST00000572382.5
ENST00000572430.5
ENST00000572554.1
ENST00000575111.5
ENST00000575400.5
ENST00000576229.5
CDS CAA 90 bp TCCTCACTATTCCACACCATGTTCAGAAGTTCATTGGAATTCACATaGTGTACTACAGCGGCACCATATCCAGCCTTCTGGGCATTTAGG +
Preference number: 6 (lower is better)
Translates to: SSLFHTMFRSSLEFT*CTTAAPYPAFWAFR
Trigger: CCTAAATGCCCAGAAGGCTGGATATGGTGCCGCTGTAGTACACAATGTGAATTCCAATGAACTTCTGAACATGGTGTGGAATAGTGAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000262482.11
ENST00000570492.5
ENST00000571816.5
ENST00000572430.5
ENST00000572554.1
ENST00000575111.5
ENST00000575400.5
ENST00000576229.5
CDS CAA 90 bp TGCTGCTGGATTTCCTCACTATTCCACACCATGTTCAGAAGTTCATaGGAATTCACATTGTGTACTACAGCGGCACCATATCCAGCCTTC +
Preference number: 6 (lower is better)
Translates to: CCWISSLFHTMFRSS*EFTLCTTAAPYPAF
Trigger: GAAGGCTGGATATGGTGCCGCTGTAGTACACAATGTGAATTCCAATGAACTTCTGAACATGGTGTGGAATAGTGAGGAAATCCAGCAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000262482.11
ENST00000570492.5
ENST00000571816.5
ENST00000572430.5
ENST00000572554.1
ENST00000575111.5
ENST00000575400.5
ENST00000576229.5
CDS CAA 72 bp TTCCACACCATGTTCAGAAGTTCATTGGAATTCACATaGTGTACTACAGCGGCACCATATCCAGCCTTCTGG +
Preference number: 6 (lower is better)
Translates to: FHTMFRSSLEFT*CTTAAPYPAFW
Trigger: CCAGAAGGCTGGATATGGTGCCGCTGTAGTACACAATGTGAATTCCAATGAACTTCTGAACATGGTGTGGAA
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000262482.11
ENST00000570492.5
ENST00000571816.5
ENST00000572430.5
ENST00000572554.1
ENST00000575111.5
ENST00000575400.5
ENST00000576229.5
CDS CAA 72 bp TCCCTTCTGATAGTCATGTGTAGGAATCTGTTTCAGTaGCTCTTTGGTAAGTCGATTCCGCTGGAGCCGTTT +
Preference number: 6 (lower is better)
Translates to: SLLIVMCRNLFQ*LFGKSIPLEPF
Trigger: AAACGGCTCCAGCGGAATCGACTTACCAAAGAGCAACTGAAACAGATTCCTACACATGACTATCAGAAGGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000262482.11
ENST00000571816.5
ENST00000572382.5
ENST00000572430.5
ENST00000575111.5
ENST00000575524.1
ENST00000576229.5
CDS TCA 72 bp CAAACTCTTCTCTATTTTCCCGCGATTCTAATTCGGTaGAAACAGCGCCTTTCCTCTGGTTTCCAAATCAGT +
Preference number: 6 (lower is better)
Translates to: QTLLYFPAILIR*KQRLSSGFQIS
Trigger: ACTGATTTGGAAACCAGAGGAAAGGCGCTGTTTTCACCGAATTAGAATCGCGGGAAAATAGAGAAGAGTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000571365.1
ENST00000571816.5
ENST00000572430.5
ENST00000573404.5
ENST00000576452.5