RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RNF157 (Homo sapiens)

Ensembl gene IDs: ENSG00000141576

Ensembl transcript IDs: ENST00000269391.11, ENST00000319945.10, ENST00000589317.1, ENST00000591355.1, ENST00000591615.1, ENST00000592271.1, ENST00000592869.1, ENST00000593155.1, ENST00000647930.1

Found 632 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GCCCAACCCTGCCTCCTACCCAGCTGCTCTACACCCTCCGTGAGATaGCCTGCCCCTCACCCACCCTCCCTTGCCAATGCCACTGGCACC +
Preference number: 1 (lower is better)
Translates to: AQPCLLPSCSTPSVR*PAPHPPSLANATGT
Trigger: GGTGCCAGTGGCATTGGCAAGGGAGGGTGGGTGAGGGGCAGGTCATCTCACGGAGGGTGTAGAGCAGCTGGGTAGGAGGCAGGGTTGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591615.1
3UTR GCA 90 bp GAGAACCAGGCCTTCCCCCATGAGGCAACTCACCAAGGCCTGGCCTaGCCAGGTAGTGCCCTGGGCCTGAGCCCAGGATCTGTTTCCTCC +
Preference number: 1 (lower is better)
Translates to: ENQAFPHEATHQGLA*PGSALGLSPGSVSS
Trigger: GGAGGAAACAGATCCTGGGCTCAGGCCCAGGGCACTACCTGGGCAGGCCAGGCCTTGGTGAGTTGCCTCATGGGGGAAGGCCTGGTTCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000591615.1
3UTR GCA 90 bp AGGACCCTAACTCCCAGGCCAGCCGGCTTAGAGTGTGGTGGTCTGTaGCCAGGAGATGCCTCAGCGGGGGTAGAAACTCTGGTGGGATGG +
Preference number: 1 (lower is better)
Translates to: RTLTPRPAGLECGGL*PGDASAGVETLVGW
Trigger: CCATCCCACCAGAGTTTCTACCCCCGCTGAGGCATCTCCTGGGCACAGACCACCACACTCTAAGCCGGCTGGCCTGGGAGTTAGGGTCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
3UTR TCA 90 bp CTGGGGCAAAAGGGTTGGCCACTGACCTGTCCTCATCAGGCTGACTaGGGACCAGCTCCTTGGATGGAGTATTTCTGTGGGCCAGAGAGC +
Preference number: 1 (lower is better)
Translates to: LGQKGWPLTCPHQAD*GPAPWMEYFCGPES
Trigger: GCTCTCTGGCCCACAGAAATACTCCATCCAAGGAGCTGGTCCTCAGTCAGCCTGATGAGGACAGGTCAGTGGCCAACCCTTTTGCCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
3UTR CCA 90 bp GGTGCTCCTAGTGCTTGTAGAGGGAAACGCTACGTCCGTGCAGTATaGCTCTCCCTTTCCACAGGAGCGATCCTCCAGCCCTACCCCAAA +
Preference number: 1 (lower is better)
Translates to: GAPSACRGKRYVRAV*LSLSTGAILQPYPK
Trigger: TTTGGGGTAGGGCTGGAGGATCGCTCCTGTGGAAAGGGAGAGCCATACTGCACGGACGTAGCGTTTCCCTCTACAAGCACTAGGAGCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
3UTR TCA 90 bp AGGACTGGGGCAAAAGGGTTGGCCACTGACCTGTCCTCATCAGGCTaGCTGAGGACCAGCTCCTTGGATGGAGTATTTCTGTGGGCCAGA +
Preference number: 1 (lower is better)
Translates to: RTGAKGLATDLSSSG*LRTSSLDGVFLWAR
Trigger: TCTGGCCCACAGAAATACTCCATCCAAGGAGCTGGTCCTCAGTCAGCCTGATGAGGACAGGTCAGTGGCCAACCCTTTTGCCCCAGTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
3UTR TCA 90 bp TGTGACTGTCTCCAGATGAAGGACTGGGGCAAAAGGGTTGGCCACTaGCCTGTCCTCATCAGGCTGACTGAGGACCAGCTCCTTGGATGG +
Preference number: 1 (lower is better)
Translates to: CDCLQMKDWGKRVGH*PVLIRLTEDQLLGW
Trigger: CCATCCAAGGAGCTGGTCCTCAGTCAGCCTGATGAGGACAGGTCAGTGGCCAACCCTTTTGCCCCAGTCCTTCATCTGGAGACAGTCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
3UTR GCA 90 bp ATTCCAACCTCTGCTCCCAGCACACTGCTGCTGGCCACATGCTGCTaGCTGAACTTAGCTCAAGGCTCTCCATCACTTCCTTTGGGGACC +
Preference number: 1 (lower is better)
Translates to: IPTSAPSTLLLATCC*LNLAQGSPSLPLGT
Trigger: GGTCCCCAAAGGAAGTGATGGAGAGCCTTGAGCTAAGTTCAGGCAGCAGCATGTGGCCAGCAGCAGTGTGCTGGGAGCAGAGGTTGGAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
3UTR GCA 90 bp CTGATTCCAACCTCTGCTCCCAGCACACTGCTGCTGGCCACATGCTaGTGCCTGAACTTAGCTCAAGGCTCTCCATCACTTCCTTTGGGG +
Preference number: 1 (lower is better)
Translates to: LIPTSAPSTLLLATC*CLNLAQGSPSLPLG
Trigger: CCCCAAAGGAAGTGATGGAGAGCCTTGAGCTAAGTTCAGGCAGCAGCATGTGGCCAGCAGCAGTGTGCTGGGAGCAGAGGTTGGAATCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
3UTR GCA 90 bp GCCCTGATTCCAACCTCTGCTCCCAGCACACTGCTGCTGGCCACATaGTGCTGCCTGAACTTAGCTCAAGGCTCTCCATCACTTCCTTTG +
Preference number: 1 (lower is better)
Translates to: ALIPTSAPSTLLLAT*CCLNLAQGSPSLPL
Trigger: CAAAGGAAGTGATGGAGAGCCTTGAGCTAAGTTCAGGCAGCAGCATGTGGCCAGCAGCAGTGTGCTGGGAGCAGAGGTTGGAATCAGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
3UTR TCA 90 bp AGCAGTATACACATGCACACACCAGGTGTGCAGACCAAAGCAAAGTaGGCGACCAGCGTGCTAAACTCCAGGTGGGCAGGACCCCAACTC +
Preference number: 1 (lower is better)
Translates to: SSIHMHTPGVQTKAK*ATSVLNSRWAGPQL
Trigger: GAGTTGGGGTCCTGCCCACCTGGAGTTTAGCACGCTGGTCGCTCACTTTGCTTTGGTCTGCACACCTGGTGTGTGCATGTGTATACTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
3UTR GCA 90 bp GGCTCTCCCTTTCCACAGGAGCGATCCTCCAGCCCTACCCCAAACTaGAGGTTTCCAATTGGTTATGATGTGCCAGAGACCAGGAAATGC +
Preference number: 1 (lower is better)
Translates to: GSPFPQERSSSPTPN*RFPIGYDVPETRKC
Trigger: GCATTTCCTGGTCTCTGGCACATCATAACCAATTGGAAACCTGCAGTTTGGGGTAGGGCTGGAGGATCGCTCCTGTGGAAAGGGAGAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
3UTR GCA 90 bp TACTCCAGGGAGAGGGGTACACAGATGGCACAAGCAGTATACACATaGACACACCAGGTGTGCAGACCAAAGCAAAGTGAGCGACCAGCG +
Preference number: 1 (lower is better)
Translates to: YSRERGTQMAQAVYT*THQVCRPKQSERPA
Trigger: CGCTGGTCGCTCACTTTGCTTTGGTCTGCACACCTGGTGTGTGCATGTGTATACTGCTTGTGCCATCTGTGTACCCCTCTCCCTGGAGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
3UTR TCA 90 bp TTTAGGTCACACGGAGAAAGGAGGGTTCCAGTTCCCTCTGAGAGGTaGGGGATTGTGGTTACAGGTTGTAACAGCTGTCACAGGAGGGTA +
Preference number: 1 (lower is better)
Translates to: FRSHGERRVPVPSER*GIVVTGCNSCHRRV
Trigger: TACCCTCCTGTGACAGCTGTTACAACCTGTAACCACAATCCCTCACCTCTCAGAGGGAACTGGAACCCTCCTTTCTCCGTGTGACCTAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
3UTR TCA 90 bp AAATTAGCCCATGGACCCCAGCTCCACCTGAACATCAATATACCGTaGGGACATTCCAGAGTCCCTGCAAAAGGTCTCGTGAGCTGCAGT +
Preference number: 1 (lower is better)
Translates to: KLAHGPQLHLNINIP*GHSRVPAKGLVSCS
Trigger: ACTGCAGCTCACGAGACCTTTTGCAGGGACTCTGGAATGTCCTCACGGTATATTGATGTTCAGGTGGAGCTGGGGTCCATGGGCTAATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
3UTR TCA 90 bp TTTGCTCAGATAAAGGCTCCCTCAACACCAACACTTCTGGAACAATaGAGACCTCAAAAATCAGCATTCCTTTCAGGCCACCCAAGTCGT +
Preference number: 1 (lower is better)
Translates to: FAQIKAPSTPTLLEQ*RPQKSAFLSGHPSR
Trigger: ACGACTTGGGTGGCCTGAAAGGAATGCTGATTTTTGAGGTCTTCATTGTTCCAGAAGTGTTGGTGTTGAGGGAGCCTTTATCTGAGCAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000591615.1
3UTR TCA 90 bp CATGGTAGGGGCTGGGACTTTCTAGCAGACATATGCACAAGGTGCTaGTCATTCTGGAAGAGGGAGAATGGATGGCTAACTTTGAATTTT +
Preference number: 1 (lower is better)
Translates to: HGRGWDFLADICTRC*SFWKRENGWLTLNF
Trigger: AAAATTCAAAGTTAGCCATCCATTCTCCCTCTTCCAGAATGATCAGCACCTTGTGCATATGTCTGCTAGAAAGTCCCAGCCCCTACCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591615.1
3UTR-3UTR TCA 90 bp CTGGCCTCTGCAGCCACACAGAAACGAAGGACCCCCTGGGCACCAGGCTCTTTTGCTGGGGAGGGCCCTTaGAGTGAAGGCCCTGAGCCC +
Preference number: 2 (lower is better)
Translates to: LASAATQKRRTPWAPGSFAGEGP*SEGPEP
Trigger: GGGCTCAGGGCCTTCACTTCAAGGGCCCTCCCCAGC...AAAAGAGCCTGGTGCCCAGGGGGTCCTTCGTTTCTGTGTGGCTGCAGAGGCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
3UTR-3UTR TCA 90 bp CTCTGCAGCCACACAGAAACGAAGGACCCCCTGGGCACCAGGCTCTTTTTGAGGGAAGGCCCTGAGCCCTaGTTCCAACCTCTGCTCCCA +
Preference number: 2 (lower is better)
Translates to: LCSHTETKDPLGTRLFLREGPEP*FQPLLP
Trigger: TGGGAGCAGAGGTTGGAATCAGGGCTCAGGGCCTTC...CCTCAAAAAGAGCCTGGTGCCCAGGGGGTCCTTCGTTTCTGTGTGGCTGCAGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
3UTR-3UTR CCA 90 bp ACCAGGCCTTCCCCCATGAGGCAACTCACCAAGGCCTGGCCTGCCCAGGTAGTGTGGAAAGAAAAGTGCTaGCACATGGTAGGGGCTGGG +
Preference number: 2 (lower is better)
Translates to: TRPSPMRQLTKAWPAQVVWKEKC*HMVGAG
Trigger: CCCAGCCCCTACCATGTGCCAGCACTTTTCTTTCCA...CACTACCTGGGCAGGCCAGGCCTTGGTGAGTTGCCTCATGGGGGAAGGCCTGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000591615.1
3UTR-3UTR TCA 90 bp CCAATCCCACTCCCATTAACCTGGGCCATGTCAGTGTCTAAGTTGGCCCTGCCCGTAGTGCCCTGGGCCTaGGCCCAGGATCTGTTTCCT +
Preference number: 2 (lower is better)
Translates to: PIPLPLTWAMSVSKLALPVVPWA*AQDLFP
Trigger: AGGAAACAGATCCTGGGCTCAGGCCCAGGGCACTAC...GGGCAGGGCCAACTTAGACACTGACATGGCCCAGGTTAATGGGAGTGGGATTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591615.1
3UTR-3UTR TCA 90 bp GAGGGAAACGCTACGTCCGTGCAGTATGGCTCTCCCTTTCCACAGGAGCGATCCGGTTCCAGTTCCCTCTaGGAGGTGAGGGATTGTGGT +
Preference number: 2 (lower is better)
Translates to: EGNATSVQYGSPFPQERSGSSSL*EVRDCG
Trigger: ACCACAATCCCTCACCTCTCAGAGGGAACTGGAACC...GGATCGCTCCTGTGGAAAGGGAGAGCCATACTGCACGGACGTAGCGTTTCCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
3UTR-3UTR TCA 90 bp GCCATGTCAGTGTCTAAGTTGGCCCTGCCCCATTTACTTTTAGGAGCACACTCTACACCCTCCGTGAGATaGCCTGCCCCTCACCCACCC +
Preference number: 2 (lower is better)
Translates to: AMSVSKLALPHLLLGAHSTPSVR*PAPHPP
Trigger: GGGTGGGTGAGGGGCAGGTCATCTCACGGAGGGTGT...AGAGTGTGCTCCTAAAAGTAAATGGGGCAGGGCCAACTTAGACACTGACATGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000591615.1
3UTR-3UTR GCA 90 bp AACGAAGGACCCCCTGGGCACCAGGCTCTTTTTGAGGCTGCCTTGGAAACAGCCGAAACGCTACGTCCGTaGAGTATGGCTCTCCCTTTC +
Preference number: 2 (lower is better)
Translates to: NEGPPGHQALFEAALETAETLRP*SMALPF
Trigger: GAAAGGGAGAGCCATACTGCACGGACGTAGCGTTTC...GGCTGTTTCCAAGGCAGCCTCAAAAAGAGCCTGGTGCCCAGGGGGTCCTTCGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
3UTR-3UTR GCA 90 bp CTCTGCAGCCACACAGAAACGAAGGACCCCCTGGGCACCAGGCTCTTTTTGAGGGAAACGCTACGTCCGTaGAGTATGGCTCTCCCTTTC +
Preference number: 2 (lower is better)
Translates to: LCSHTETKDPLGTRLFLRETLRP*SMALPF
Trigger: GAAAGGGAGAGCCATACTGCACGGACGTAGCGTTTC...CCTCAAAAAGAGCCTGGTGCCCAGGGGGTCCTTCGTTTCTGTGTGGCTGCAGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
3UTR-3UTR TCA 90 bp AGGCTCTCCATCACTTCCTTTGGGGACCTGGGCACCAAACTGAGAATCACTGGTTCTCCAGCATCTTGCTaGGGATGCCCAGTAGGCAGC +
Preference number: 2 (lower is better)
Translates to: RLSITSFGDLGTKLRITGSPASC*GCPVGS
Trigger: GCTGCCTACTGGGCATCCTCAGCAAGATGCTGGAGA...ACCAGTGATTCTCAGTTTGGTGCCCAGGTCCCCAAAGGAAGTGATGGAGAGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
3UTR-3UTR TCA 90 bp GGTGCTCCTAGTGCTTGTAGAGGGAAACGCTACGTCCGTGCAGTATGGCTCTCCGTTCCCTCTGAGAGGTaGGGGATTGTGGTTACAGGT +
Preference number: 2 (lower is better)
Translates to: GAPSACRGKRYVRAVWLSVPSER*GIVVTG
Trigger: ACCTGTAACCACAATCCCTCACCTCTCAGAGGGAAC...GGAGAGCCATACTGCACGGACGTAGCGTTTCCCTCTACAAGCACTAGGAGCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
3UTR-3UTR TCA 90 bp CTTGAAGTGAAGGCCCTGAGCCCTGATTCCAACCTCTGCTCCCAGCACACTGCTGACCCCAGCTCCACCTaGACATCAATATACCGTGAG +
Preference number: 2 (lower is better)
Translates to: LEVKALSPDSNLCSQHTADPSST*TSIYRE
Trigger: CTCACGGTATATTGATGTTCAGGTGGAGCTGGGGTC...AGCAGTGTGCTGGGAGCAGAGGTTGGAATCAGGGCTCAGGGCCTTCACTTCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
3UTR-3UTR TCA 90 bp ACCAGGCCTTCCCCCATGAGGCAACTCACCAAGGCCTGGCCTGCCCAGGTAGTGCTTTATCCTTTCGCTTaGAATGTTTCTCACTCTGGC +
Preference number: 2 (lower is better)
Translates to: TRPSPMRQLTKAWPAQVVLYPFA*NVSHSG
Trigger: GCCAGAGTGAGAAACATTTCAAGCGAAAGGATAAAG...CACTACCTGGGCAGGCCAGGCCTTGGTGAGTTGCCTCATGGGGGAAGGCCTGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000591615.1
3UTR-3UTR GCA 90 bp ACAAACCATCTTCCTCTAGCTACACGAGCCTTTCCATCCCATCCAGGCCTCCTGTGCCTCCTACCCAGCTaGTCTACACCCTCCGTGAGA +
Preference number: 2 (lower is better)
Translates to: TNHLPLATRAFPSHPGLLCLLPS*STPSVR
Trigger: TCTCACGGAGGGTGTAGAGCAGCTGGGTAGGAGGCA...CAGGAGGCCTGGATGGGATGGAAAGGCTCGTGTAGCTAGAGGAAGATGGTTTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591615.1
3UTR-3UTR CCA 90 bp GCCATGTCAGTGTCTAAGTTGGCCCTGCCCCATTTACTTTTAGGAGCACACTCTCAACTCACCAAGGCCTaGCCTGCCCAGGTAGTGCCC +
Preference number: 2 (lower is better)
Translates to: AMSVSKLALPHLLLGAHSQLTKA*PAQVVP
Trigger: GGGCACTACCTGGGCAGGCCAGGCCTTGGTGAGTTG...AGAGTGTGCTCCTAAAAGTAAATGGGGCAGGGCCAACTTAGACACTGACATGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591615.1
3UTR-3UTR GCA 90 bp AACGAAGGACCCCCTGGGCACCAGGCTCTTTTTGAGGCTGCCTTGGAAACAGCCCCAGAGACCAGGAAATaGCAGAGGGATGTTTGTAAC +
Preference number: 2 (lower is better)
Translates to: NEGPPGHQALFEAALETAPETRK*QRDVCN
Trigger: GTTACAAACATCCCTCTGGCATTTCCTGGTCTCTGG...GGCTGTTTCCAAGGCAGCCTCAAAAAGAGCCTGGTGCCCAGGGGGTCCTTCGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
3UTR-3UTR GCA 90 bp TGTCCCCACTGTAGTGTGACCACAAGTGTACTCCAGGGAGAGGGGTACACAGATCTGCTGCTGGCCACATaGTGCTGCCTGAACTTAGCT +
Preference number: 2 (lower is better)
Translates to: CPHCSVTTSVLQGEGYTDLLLAT*CCLNLA
Trigger: AGCTAAGTTCAGGCAGCAGCATGTGGCCAGCAGCAG...ATCTGTGTACCCCTCTCCCTGGAGTACACTTGTGGTCACACTACAGTGGGGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
3UTR-3UTR GCA 90 bp GCCATGTCAGTGTCTAAGTTGGCCCTGCCCCATTTACTTTTAGGAGCACACTCTGAGGAAGCCCAACCCTaGCTCCTACCCAGCTGCTCT +
Preference number: 2 (lower is better)
Translates to: AMSVSKLALPHLLLGAHSEEAQP*LLPSCS
Trigger: AGAGCAGCTGGGTAGGAGGCAGGGTTGGGCTTCCTC...AGAGTGTGCTCCTAAAAGTAAATGGGGCAGGGCCAACTTAGACACTGACATGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591615.1
3UTR-3UTR CCA 90 bp TGTCCCCACTGTAGTGTGACCACAAGTGTACTCCAGGGAGAGGGGTACACAGATCTCCAGATGAAGGACTaGGGCAAAAGGGTTGGCCAC +
Preference number: 2 (lower is better)
Translates to: CPHCSVTTSVLQGEGYTDLQMKD*GKRVGH
Trigger: GTGGCCAACCCTTTTGCCCCAGTCCTTCATCTGGAG...ATCTGTGTACCCCTCTCCCTGGAGTACACTTGTGGTCACACTACAGTGGGGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
3UTR CAA 90 bp GGACATTCCAGAGTCCCTGCAAAAGGTCTCGTGAGCTGCAGTTCATaGAGTGGCTTTAGGTCACACGGAGAAAGGAGGGTTCCAGTTCCC +
Preference number: 2 (lower is better)
Translates to: GHSRVPAKGLVSCSS*SGFRSHGERRVPVP
Trigger: GGGAACTGGAACCCTCCTTTCTCCGTGTGACCTAAAGCCACTCAATGAACTGCAGCTCACGAGACCTTTTGCAGGGACTCTGGAATGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
3UTR CAA 90 bp GGCCCAATCCCACTCCCATTAACCTGGGCCATGTCAGTGTCTAAGTaGGCCCTGCCCCATTTACTTTTAGGAGCACACTCTTCTGCCTCA +
Preference number: 2 (lower is better)
Translates to: GPIPLPLTWAMSVSK*ALPHLLLGAHSSAS
Trigger: TGAGGCAGAAGAGTGTGCTCCTAAAAGTAAATGGGGCAGGGCCAACTTAGACACTGACATGGCCCAGGTTAATGGGAGTGGGATTGGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591615.1
3UTR-3UTR TCA 90 bp CCAATCCCACTCCCATTAACCTGGGCCATGTCAGTGTCTAAGTTGGCCCTGCCCATATGCACAAGGTGCTaGTCATTCTGGAAGAGGGAG +
Preference number: 2 (lower is better)
Translates to: PIPLPLTWAMSVSKLALPICTRC*SFWKRE
Trigger: CTCCCTCTTCCAGAATGATCAGCACCTTGTGCATAT...GGGCAGGGCCAACTTAGACACTGACATGGCCCAGGTTAATGGGAGTGGGATTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591615.1
3UTR-3UTR TCA 90 bp CCAATCCCACTCCCATTAACCTGGGCCATGTCAGTGTCTAAGTTGGCCCTGCCCGACATAGCCTGTCGCTaGTTTTATATCCCACTCTCC +
Preference number: 2 (lower is better)
Translates to: PIPLPLTWAMSVSKLALPDIACR*FYIPLS
Trigger: GGAGAGTGGGATATAAAATCAGCGACAGGCTATGTC...GGGCAGGGCCAACTTAGACACTGACATGGCCCAGGTTAATGGGAGTGGGATTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591615.1
3UTR-3UTR GCA 90 bp GCCATGTCAGTGTCTAAGTTGGCCCTGCCCCATTTACTTTTAGGAGCACACTCTACCCTCCCTTGCCAATaGCACTGGCACCACTCTCTC +
Preference number: 2 (lower is better)
Translates to: AMSVSKLALPHLLLGAHSTLPCQ*HWHHSL
Trigger: GAGAGAGTGGTGCCAGTGGCATTGGCAAGGGAGGGT...AGAGTGTGCTCCTAAAAGTAAATGGGGCAGGGCCAACTTAGACACTGACATGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591615.1
3UTR-3UTR CCA 90 bp AACGAAGGACCCCCTGGGCACCAGGCTCTTTTTGAGGCTGCCTTGGAAACAGCCAGAGGTGAGGGATTGTaGTTACAGGTTGTAACAGCT +
Preference number: 2 (lower is better)
Translates to: NEGPPGHQALFEAALETARGEGL*LQVVTA
Trigger: AGCTGTTACAACCTGTAACCACAATCCCTCACCTCT...GGCTGTTTCCAAGGCAGCCTCAAAAAGAGCCTGGTGCCCAGGGGGTCCTTCGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
3UTR-3UTR CCA 90 bp TGTCCCCACTGTAGTGTGACCACAAGTGTACTCCAGGGAGAGGGGTACACAGATCTCCATCACTTCCTTTaGGGACCTGGGCACCAAACT +
Preference number: 2 (lower is better)
Translates to: CPHCSVTTSVLQGEGYTDLHHFL*GPGHQT
Trigger: AGTTTGGTGCCCAGGTCCCCAAAGGAAGTGATGGAG...ATCTGTGTACCCCTCTCCCTGGAGTACACTTGTGGTCACACTACAGTGGGGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
3UTR CAA 90 bp CACAGGAGCGATCCTCCAGCCCTACCCCAAACTGCAGGTTTCCAATaGGTTATGATGTGCCAGAGACCAGGAAATGCCAGAGGGATGTTT +
Preference number: 2 (lower is better)
Translates to: HRSDPPALPQTAGFQ*VMMCQRPGNARGMF
Trigger: AAACATCCCTCTGGCATTTCCTGGTCTCTGGCACATCATAACCAATTGGAAACCTGCAGTTTGGGGTAGGGCTGGAGGATCGCTCCTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
3UTR-3UTR TCA 90 bp CATTTCTTGTCCTTGAGAAAGGTGCTCCTAGTGCTTGTAGAGGGAAACGCTACGTCTCCAGCATCTTGCTaGGGATGCCCAGTAGGCAGC +
Preference number: 2 (lower is better)
Translates to: HFLSLRKVLLVLVEGNATSPASC*GCPVGS
Trigger: GCTGCCTACTGGGCATCCTCAGCAAGATGCTGGAGA...CGTAGCGTTTCCCTCTACAAGCACTAGGAGCACCTTTCTCAAGGACAAGAAATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
3UTR-3UTR TCA 90 bp CCTGAACATCAATATACCGTGAGGACATTCCAGAGTCCCTGCAAAAGGTCTCGTTCTCCAGCATCTTGCTaGGGATGCCCAGTAGGCAGC +
Preference number: 2 (lower is better)
Translates to: PEHQYTVRTFQSPCKRSRSPASC*GCPVGS
Trigger: GCTGCCTACTGGGCATCCTCAGCAAGATGCTGGAGA...ACGAGACCTTTTGCAGGGACTCTGGAATGTCCTCACGGTATATTGATGTTCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
3UTR-3UTR TCA 90 bp TGTCCCCACTGTAGTGTGACCACAAGTGTACTCCAGGGAGAGGGGTACACAGATGGTGAACTGTTGACGTaGCTATGTGACTGTCTCCAG +
Preference number: 2 (lower is better)
Translates to: CPHCSVTTSVLQGEGYTDGELLT*LCDCLQ
Trigger: CTGGAGACAGTCACATAGTCACGTCAACAGTTCACC...ATCTGTGTACCCCTCTCCCTGGAGTACACTTGTGGTCACACTACAGTGGGGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
3UTR-3UTR TCA 90 bp TTGGCAAGGAAAAAGATGGGAAGGGAAAATATGGATGCAAAGGGCGATAGCAAGCCAGGCCTTCCCCCATaGGGCAACTCACCAAGGCCT +
Preference number: 2 (lower is better)
Translates to: LARKKMGRENMDAKGDSKPGLPP*GNSPRP
Trigger: AGGCCTTGGTGAGTTGCCTCATGGGGGAAGGCCTGG...CTTGCTATCGCCCTTTGCATCCATATTTTCCCTTCCCATCTTTTTCCTTGCCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000591615.1
3UTR-3UTR GCA 90 bp CTTGAAGTGAAGGCCCTGAGCCCTGATTCCAACCTCTGCTCCCAGCACACTGCTAGCCCTACCCCAAACTaGAGGTTTCCAATTGGTTAT +
Preference number: 2 (lower is better)
Translates to: LEVKALSPDSNLCSQHTASPTPN*RFPIGY
Trigger: ATAACCAATTGGAAACCTGCAGTTTGGGGTAGGGCT...AGCAGTGTGCTGGGAGCAGAGGTTGGAATCAGGGCTCAGGGCCTTCACTTCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
3UTR-3UTR GCA 90 bp TTGGCAAGGAAAAAGATGGGAAGGGAAAATATGGATGCAAAGGGCGATAGCAAGCTCCGTGAGATGACCTaGCCCTCACCCACCCTCCCT +
Preference number: 2 (lower is better)
Translates to: LARKKMGRENMDAKGDSKLREMT*PSPTLP
Trigger: AGGGAGGGTGGGTGAGGGGCAGGTCATCTCACGGAG...CTTGCTATCGCCCTTTGCATCCATATTTTCCCTTCCCATCTTTTTCCTTGCCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000591615.1
3UTR-3UTR CCA 90 bp TTTGGGGACCTGGGCACCAAACTGAGAATCACTGGTCCACATTTCTCTCAACCATCCTCACCCAGTGCTTaGCACACAGAGGTGGTCAAC +
Preference number: 2 (lower is better)
Translates to: FGDLGTKLRITGPHFSQPSSPSA*HTEVVN
Trigger: GTTGACCACCTCTGTGTGCCAAGCACTGGGTGAGGA...TGGTTGAGAGAAATGTGGACCAGTGATTCTCAGTTTGGTGCCCAGGTCCCCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
3UTR CAA 90 bp CTCACCCAGTGCTTGGCACACAGAGGTGGTCAACACATGTGTTTCTaGAAATGTCACCTTAGGATGGAGTTGCAGGCCTCCCTGAATGCA +
Preference number: 2 (lower is better)
Translates to: LTQCLAHRGGQHMCF*KCHLRMELQASLNA
Trigger: TGCATTCAGGGAGGCCTGCAACTCCATCCTAAGGTGACATTTCAAGAAACACATGTGTTGACCACCTCTGTGTGCCAAGCACTGGGTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
3UTR-3UTR TCA 90 bp ACTCCTCACCCAGTGCTTGGCACACAGAGGTGGTCAACACATGTGTTTCTTGAAGTTCCCTCTGAGAGGTaGGGGATTGTGGTTACAGGT +
Preference number: 2 (lower is better)
Translates to: TPHPVLGTQRWSTHVFLEVPSER*GIVVTG
Trigger: ACCTGTAACCACAATCCCTCACCTCTCAGAGGGAAC...TTCAAGAAACACATGTGTTGACCACCTCTGTGTGCCAAGCACTGGGTGAGGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
3UTR-3UTR TCA 90 bp CATTTCTTGTCCTTGAGAAAGGTGCTCCTAGTGCTTGTAGAGGGAAACGCTACGGGTTCCAGTTCCCTCTaGGAGGTGAGGGATTGTGGT +
Preference number: 2 (lower is better)
Translates to: HFLSLRKVLLVLVEGNATGSSSL*EVRDCG
Trigger: ACCACAATCCCTCACCTCTCAGAGGGAACTGGAACC...CGTAGCGTTTCCCTCTACAAGCACTAGGAGCACCTTTCTCAAGGACAAGAAATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
3UTR-3UTR TCA 90 bp CCATTTCTTGTCCTTGAGAAAGGTGCTCCTAGTGCTTGTAGAGGGAAACGCTACGGTTCCAGTTCCCTCTaGGAGGTGAGGGATTGTGGT +
Preference number: 2 (lower is better)
Translates to: PFLVLEKGAPSACRGKRYGSSSL*EVRDCG
Trigger: ACCACAATCCCTCACCTCTCAGAGGGAACTGGAACC...GTAGCGTTTCCCTCTACAAGCACTAGGAGCACCTTTCTCAAGGACAAGAAATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
3UTR-3UTR TCA 90 bp ACTCCTCACCCAGTGCTTGGCACACAGAGGTGGTCAACACATGTGTTTCTTGAAGACCCCAGCTCCACCTaGACATCAATATACCGTGAG +
Preference number: 2 (lower is better)
Translates to: TPHPVLGTQRWSTHVFLEDPSST*TSIYRE
Trigger: CTCACGGTATATTGATGTTCAGGTGGAGCTGGGGTC...TTCAAGAAACACATGTGTTGACCACCTCTGTGTGCCAAGCACTGGGTGAGGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
3UTR-3UTR TCA 90 bp TGTCCCCACTGTAGTGTGACCACAAGTGTACTCCAGGGAGAGGGGTACACAGATGTTGACGTGACTATGTaGCTGTCTCCAGATGAAGGA +
Preference number: 2 (lower is better)
Translates to: CPHCSVTTSVLQGEGYTDVDVTM*LSPDEG
Trigger: TCCTTCATCTGGAGACAGTCACATAGTCACGTCAAC...ATCTGTGTACCCCTCTCCCTGGAGTACACTTGTGGTCACACTACAGTGGGGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
3UTR-3UTR GCA 90 bp CGATCCTCCAGCCCTACCCCAAACTGCAGGTTTCCAATTGGTTATGATGTGCCAACATTCCAGAGTCCCTaGAAAAGGTCTCGTGAGCTG +
Preference number: 2 (lower is better)
Translates to: RSSSPTPNCRFPIGYDVPTFQSP*KRSREL
Trigger: CAGCTCACGAGACCTTTTGCAGGGACTCTGGAATGT...TGGCACATCATAACCAATTGGAAACCTGCAGTTTGGGGTAGGGCTGGAGGATCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
3UTR-3UTR TCA 90 bp AGGACCAGCTCCTTGGATGGAGTATTTCTGTGGGCCAGAGAGCTAAATGACAGCACATTAGGTGGGGCCTaGAATGGTAAAGTCTACTGC +
Preference number: 2 (lower is better)
Translates to: RTSSLDGVFLWARELNDSTLGGA*NGKVYC
Trigger: GCAGTAGACTTTACCATTTCAGGCCCCACCTAATGT...GCTGTCATTTAGCTCTCTGGCCCACAGAAATACTCCATCCAAGGAGCTGGTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
3UTR-3UTR CCA 90 bp AGAAAGGTGCTCCTAGTGCTTGTAGAGGGAAACGCTACGTCCGTGCAGTATGGCAGAGGTGAGGGATTGTaGTTACAGGTTGTAACAGCT +
Preference number: 2 (lower is better)
Translates to: RKVLLVLVEGNATSVQYGRGEGL*LQVVTA
Trigger: AGCTGTTACAACCTGTAACCACAATCCCTCACCTCT...GCCATACTGCACGGACGTAGCGTTTCCCTCTACAAGCACTAGGAGCACCTTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
3UTR-3UTR TCA 90 bp AGCGATCCTCCAGCCCTACCCCAAACTGCAGGTTTCCAATTGGTTATGATGTGCAACATCAATATACCGTaGGGACATTCCAGAGTCCCT +
Preference number: 2 (lower is better)
Translates to: SDPPALPQTAGFQLVMMCNINIP*GHSRVP
Trigger: AGGGACTCTGGAATGTCCTCACGGTATATTGATGTT...GCACATCATAACCAATTGGAAACCTGCAGTTTGGGGTAGGGCTGGAGGATCGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
3UTR-3UTR GCA 90 bp AACTGCAGGTTTCCAATTGGTTATGATGTGCCAGAGACCAGGAAATGCCAGAGGACATTCCAGAGTCCCTaGAAAAGGTCTCGTGAGCTG +
Preference number: 2 (lower is better)
Translates to: NCRFPIGYDVPETRKCQRTFQSP*KRSREL
Trigger: CAGCTCACGAGACCTTTTGCAGGGACTCTGGAATGT...CCTCTGGCATTTCCTGGTCTCTGGCACATCATAACCAATTGGAAACCTGCAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
3UTR-3UTR GCA 90 bp TGGTTGCTACCATTTCTTGTCCTTGAGAAAGGTGCTCCTAGTGCTTGTAGAGGGACATTCCAGAGTCCCTaGAAAAGGTCTCGTGAGCTG +
Preference number: 2 (lower is better)
Translates to: WLLPFLVLEKGAPSACRGTFQSP*KRSREL
Trigger: CAGCTCACGAGACCTTTTGCAGGGACTCTGGAATGT...CCCTCTACAAGCACTAGGAGCACCTTTCTCAAGGACAAGAAATGGTAGCAACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
3UTR-3UTR GCA 90 bp AGGCTCTCCATCACTTCCTTTGGGGACCTGGGCACCAAACTGAGAATCACTGGTCCTGATCAGGAGAAATaGTCCTTAAGGGAAATCATC +
Preference number: 2 (lower is better)
Translates to: RLSITSFGDLGTKLRITGPDQEK*SLREII
Trigger: GATGATTTCCCTTAAGGAGCATTTCTCCTGATCAGG...ACCAGTGATTCTCAGTTTGGTGCCCAGGTCCCCAAAGGAAGTGATGGAGAGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
3UTR CAA 90 bp GGTGGTCAACACATGTGTTTCTTGAAATGTCACCTTAGGATGGAGTaGCAGGCCTCCCTGAATGCACCTGATCAGGAGAAATGCTCCTTA +
Preference number: 2 (lower is better)
Translates to: GGQHMCFLKCHLRME*QASLNAPDQEKCSL
Trigger: TAAGGAGCATTTCTCCTGATCAGGTGCATTCAGGGAGGCCTGCAACTCCATCCTAAGGTGACATTTCAAGAAACACATGTGTTGACCACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
3UTR-3UTR TCA 90 bp TTTGGGGACCTGGGCACCAAACTGAGAATCACTGGTCCACATTTCTCTCAACCAGTTTCCAATTGGTTATaGTGTGCCAGAGACCAGGAA +
Preference number: 2 (lower is better)
Translates to: FGDLGTKLRITGPHFSQPVSNWL*CARDQE
Trigger: TTCCTGGTCTCTGGCACATCATAACCAATTGGAAAC...TGGTTGAGAGAAATGTGGACCAGTGATTCTCAGTTTGGTGCCCAGGTCCCCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
3UTR-3UTR GCA 90 bp TTTGGGGACCTGGGCACCAAACTGAGAATCACTGGTCCACATTTCTCTCAACCAAGCCCTACCCCAAACTaGAGGTTTCCAATTGGTTAT +
Preference number: 2 (lower is better)
Translates to: FGDLGTKLRITGPHFSQPSPTPN*RFPIGY
Trigger: ATAACCAATTGGAAACCTGCAGTTTGGGGTAGGGCT...TGGTTGAGAGAAATGTGGACCAGTGATTCTCAGTTTGGTGCCCAGGTCCCCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
3UTR-3UTR GCA 90 bp AGGACCAGCTCCTTGGATGGAGTATTTCTGTGGGCCAGAGAGCTAAATGACAGCCCTGATCAGGAGAAATaGTCCTTAAGGGAAATCATC +
Preference number: 2 (lower is better)
Translates to: RTSSLDGVFLWARELNDSPDQEK*SLREII
Trigger: GATGATTTCCCTTAAGGAGCATTTCTCCTGATCAGG...GCTGTCATTTAGCTCTCTGGCCCACAGAAATACTCCATCCAAGGAGCTGGTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
3UTR-3UTR GCA 90 bp CTACCTCTACAAGAGTGGAAAGAAAAGTGCTGGCACATGGTAGGGGCTGGGACTATTTCTCAAGTCCTTTaGTCAGATAAAGGCTCCCTC +
Preference number: 2 (lower is better)
Translates to: LPLQEWKEKCWHMVGAGTISQVL*SDKGSL
Trigger: GAGGGAGCCTTTATCTGAGCAAAGGACTTGAGAAAT...AGTCCCAGCCCCTACCATGTGCCAGCACTTTTCTTTCCACTCTTGTAGAGGTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591615.1
3UTR-3UTR CCA 90 bp ACTCCTCACCCAGTGCTTGGCACACAGAGGTGGTCAACACATGTGTTTCTTGAAAGAGGTGAGGGATTGTaGTTACAGGTTGTAACAGCT +
Preference number: 2 (lower is better)
Translates to: TPHPVLGTQRWSTHVFLERGEGL*LQVVTA
Trigger: AGCTGTTACAACCTGTAACCACAATCCCTCACCTCT...TTCAAGAAACACATGTGTTGACCACCTCTGTGTGCCAAGCACTGGGTGAGGAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
3UTR-3UTR CCA 90 bp AGGCTCTCCATCACTTCCTTTGGGGACCTGGGCACCAAACTGAGAATCACTGGTCTTCAACCAACCTTTTaGTTGCTACCATTTCTTGTC +
Preference number: 2 (lower is better)
Translates to: RLSITSFGDLGTKLRITGLQPTF*LLPFLV
Trigger: GACAAGAAATGGTAGCAACCAAAAGGTTGGTTGAAG...ACCAGTGATTCTCAGTTTGGTGCCCAGGTCCCCAAAGGAAGTGATGGAGAGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
3UTR-3UTR CCA 90 bp ACAAACCATCTTCCTCTAGCTACACGAGCCTTTCCATCCCATCCAGGCCTCCTGCTGGAAGAGGGAGAATaGATGGCTAACTTTGAATTT +
Preference number: 2 (lower is better)
Translates to: TNHLPLATRAFPSHPGLLLEEGE*MANFEF
Trigger: AAATTCAAAGTTAGCCATCCATTCTCCCTCTTCCAG...CAGGAGGCCTGGATGGGATGGAAAGGCTCGTGTAGCTAGAGGAAGATGGTTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591615.1
3UTR-3UTR CCA 90 bp GCCATGTCAGTGTCTAAGTTGGCCCTGCCCCATTTACTTTTAGGAGCACACTCTCTACCTCTACAAGAGTaGAAAGAAAAGTGCTGGCAC +
Preference number: 2 (lower is better)
Translates to: AMSVSKLALPHLLLGAHSLPLQE*KEKCWH
Trigger: GTGCCAGCACTTTTCTTTCCACTCTTGTAGAGGTAG...AGAGTGTGCTCCTAAAAGTAAATGGGGCAGGGCCAACTTAGACACTGACATGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000591615.1
3UTR CAA 90 bp GCTGCTTCTGGGCTCATATTTCAGGGAAATCAGGAAGTGGGGTTATaGCTCAGCTTATGCATCTTAACTATGAAAGGGGCGGGAAGAATG +
Preference number: 2 (lower is better)
Translates to: AASGLIFQGNQEVGL*LSLCILTMKGAGRM
Trigger: CATTCTTCCCGCCCCTTTCATAGTTAAGATGCATAAGCTGAGCAATAACCCCACTTCCTGATTTCCCTGAAATATGAGCCCAGAAGCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
3UTR-3UTR TCA 90 bp AACTGCAGGTTTCCAATTGGTTATGATGTGCCAGAGACCAGGAAATGCCAGAGGAACATCAATATACCGTaGGGACATTCCAGAGTCCCT +
Preference number: 2 (lower is better)
Translates to: NCRFPIGYDVPETRKCQRNINIP*GHSRVP
Trigger: AGGGACTCTGGAATGTCCTCACGGTATATTGATGTT...CCTCTGGCATTTCCTGGTCTCTGGCACATCATAACCAATTGGAAACCTGCAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
3UTR-3UTR TCA 90 bp TTCTTGAAATGTCACCTTAGGATGGAGTTGCAGGCCTCCCTGAATGCACCTGATAACATCAATATACCGTaGGGACATTCCAGAGTCCCT +
Preference number: 2 (lower is better)
Translates to: FLKCHLRMELQASLNAPDNINIP*GHSRVP
Trigger: AGGGACTCTGGAATGTCCTCACGGTATATTGATGTT...ATCAGGTGCATTCAGGGAGGCCTGCAACTCCATCCTAAGGTGACATTTCAAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
3UTR-3UTR TCA 90 bp TTCTTGAAATGTCACCTTAGGATGGAGTTGCAGGCCTCCCTGAATGCACCTGATGTTTCCAATTGGTTATaGTGTGCCAGAGACCAGGAA +
Preference number: 2 (lower is better)
Translates to: FLKCHLRMELQASLNAPDVSNWL*CARDQE
Trigger: TTCCTGGTCTCTGGCACATCATAACCAATTGGAAAC...ATCAGGTGCATTCAGGGAGGCCTGCAACTCCATCCTAAGGTGACATTTCAAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
3UTR-3UTR GCA 90 bp CATTTCTTGTCCTTGAGAAAGGTGCTCCTAGTGCTTGTAGAGGGAAACGCTACGAAAGGTCTCGTGAGCTaGAGTTCATTGAGTGGCTTT +
Preference number: 2 (lower is better)
Translates to: HFLSLRKVLLVLVEGNATKGLVS*SSLSGF
Trigger: AAAGCCACTCAATGAACTGCAGCTCACGAGACCTTT...CGTAGCGTTTCCCTCTACAAGCACTAGGAGCACCTTTCTCAAGGACAAGAAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
3UTR CAA 90 bp ATTGTTTCCTTCAACCAACCTTTTGGTTGCTACCATTTCTTGTCCTaGAGAAAGGTGCTCCTAGTGCTTGTAGAGGGAAACGCTACGTCC +
Preference number: 2 (lower is better)
Translates to: IVSFNQPFGCYHFLS*RKVLLVLVEGNATS
Trigger: GGACGTAGCGTTTCCCTCTACAAGCACTAGGAGCACCTTTCTCAAGGACAAGAAATGGTAGCAACCAAAAGGTTGGTTGAAGGAAACAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
3UTR-3UTR TCA 90 bp GAGATCCCATACAACCAAGGAGGCTGCAGTTTGTCTTCTAGTGCATCTCTCTCACAAGCTACAAACTGCTaGACAAGCAACTGCAAACTT +
Preference number: 2 (lower is better)
Translates to: EIPYNQGGCSLSSSASLSQATNC*TSNCKL
Trigger: AAGTTTGCAGTTGCTTGTTCAGCAGTTTGTAGCTTG...TGAGAGAGATGCACTAGAAGACAAACTGCAGCCTCCTTGGTTGTATGGGATCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592271.1
3UTR-3UTR GCA 90 bp TTGGCAAGGAAAAAGATGGGAAGGGAAAATATGGATGCAAAGGGCGATAGCAAGAGGAAGGCTTTTCTTTaGATCTCGAGGAAGCCCAAC +
Preference number: 2 (lower is better)
Translates to: LARKKMGRENMDAKGDSKRKAFL*ISRKPN
Trigger: GTTGGGCTTCCTCGAGATGCAAAGAAAAGCCTTCCT...CTTGCTATCGCCCTTTGCATCCATATTTTCCCTTCCCATCTTTTTCCTTGCCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000591615.1
3UTR-3UTR TCA 90 bp TTGGCAAGGAAAAAGATGGGAAGGGAAAATATGGATGCAAAGGGCGATAGCAAGACACTTCTGGAACAATaGAGACCTCAAAAATCAGCA +
Preference number: 2 (lower is better)
Translates to: LARKKMGRENMDAKGDSKTLLEQ*RPQKSA
Trigger: TGCTGATTTTTGAGGTCTTCATTGTTCCAGAAGTGT...CTTGCTATCGCCCTTTGCATCCATATTTTCCCTTCCCATCTTTTTCCTTGCCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000591615.1
3UTR GCA 72 bp GCCTTCCCCCATGAGGCAACTCACCAAGGCCTGGCCTaGCCAGGTAGTGCCCTGGGCCTGAGCCCAGGATCT +
Preference number: 3 (lower is better)
Translates to: AFPHEATHQGLA*PGSALGLSPGS
Trigger: AGATCCTGGGCTCAGGCCCAGGGCACTACCTGGGCAGGCCAGGCCTTGGTGAGTTGCCTCATGGGGGAAGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000591615.1
3UTR CCA 72 bp CAGGACCCTAACTCCCAGGCCAGCCGGCTTAGAGTGTaGTGGTCTGTGCCCAGGAGATGCCTCAGCGGGGGT +
Preference number: 3 (lower is better)
Translates to: QDPNSQASRLRV*WSVPRRCLSGG
Trigger: ACCCCCGCTGAGGCATCTCCTGGGCACAGACCACCACACTCTAAGCCGGCTGGCCTGGGAGTTAGGGTCCTG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
3UTR GCA 72 bp ACTCCCAGGCCAGCCGGCTTAGAGTGTGGTGGTCTGTaGCCAGGAGATGCCTCAGCGGGGGTAGAAACTCTG +
Preference number: 3 (lower is better)
Translates to: TPRPAGLECGGL*PGDASAGVETL
Trigger: CAGAGTTTCTACCCCCGCTGAGGCATCTCCTGGGCACAGACCACCACACTCTAAGCCGGCTGGCCTGGGAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
3UTR GCA 72 bp AGCCGGCTTAGAGTGTGGTGGTCTGTGCCCAGGAGATaGCTCAGCGGGGGTAGAAACTCTGGTGGGATGGAG +
Preference number: 3 (lower is better)
Translates to: SRLRVWWSVPRR*LSGGRNSGGME
Trigger: CTCCATCCCACCAGAGTTTCTACCCCCGCTGAGGCATCTCCTGGGCACAGACCACCACACTCTAAGCCGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
3UTR GCA 72 bp CTTTCCGTGCTTCTCCCTAGGAGAGGACTAAGCACCTaGTGCGAGGAAGGACAGGGATCCTCAGGAAGGGGG +
Preference number: 3 (lower is better)
Translates to: LSVLLPRRGLST*CEEGQGSSGRG
Trigger: CCCCCTTCCTGAGGATCCCTGTCCTTCCTCGCAGCAGGTGCTTAGTCCTCTCCTAGGGAGAAGCACGGAAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
3UTR-3UTR CAA 90 bp AGGCTCTCCATCACTTCCTTTGGGGACCTGGGCACCAAACTGAGAATCACTGGTCCAGGCTGGAGTGCATaGGCGCGATCTCGGCTCACT +
Preference number: 3 (lower is better)
Translates to: RLSITSFGDLGTKLRITGPGWSA*ARSRLT
Trigger: AGTGAGCCGAGATCGCGCCAATGCACTCCAGCCTGG...ACCAGTGATTCTCAGTTTGGTGCCCAGGTCCCCAAAGGAAGTGATGGAGAGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
3UTR TCA 72 bp CTCCAGATGAAGGACTGGGGCAAAAGGGTTGGCCACTaGCCTGTCCTCATCAGGCTGACTGAGGACCAGCTC +
Preference number: 3 (lower is better)
Translates to: LQMKDWGKRVGH*PVLIRLTEDQL
Trigger: GAGCTGGTCCTCAGTCAGCCTGATGAGGACAGGTCAGTGGCCAACCCTTTTGCCCCAGTCCTTCATCTGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
3UTR CCA 72 bp AGTGCTTGTAGAGGGAAACGCTACGTCCGTGCAGTATaGCTCTCCCTTTCCACAGGAGCGATCCTCCAGCCC +
Preference number: 3 (lower is better)
Translates to: SACRGKRYVRAV*LSLSTGAILQP
Trigger: GGGCTGGAGGATCGCTCCTGTGGAAAGGGAGAGCCATACTGCACGGACGTAGCGTTTCCCTCTACAAGCACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
3UTR TCA 72 bp CACATGCACACACCAGGTGTGCAGACCAAAGCAAAGTaGGCGACCAGCGTGCTAAACTCCAGGTGGGCAGGA +
Preference number: 3 (lower is better)
Translates to: HMHTPGVQTKAK*ATSVLNSRWAG
Trigger: TCCTGCCCACCTGGAGTTTAGCACGCTGGTCGCTCACTTTGCTTTGGTCTGCACACCTGGTGTGTGCATGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
3UTR GCA 72 bp ACCTCTGCTCCCAGCACACTGCTGCTGGCCACATGCTaGTGCCTGAACTTAGCTCAAGGCTCTCCATCACTT +
Preference number: 3 (lower is better)
Translates to: TSAPSTLLLATC*CLNLAQGSPSL
Trigger: AAGTGATGGAGAGCCTTGAGCTAAGTTCAGGCAGCAGCATGTGGCCAGCAGCAGTGTGCTGGGAGCAGAGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
3UTR CCA 72 bp CCCAACTACCAAGGCCCAATCCCACTCCCATTAACCTaGGCCATGTCAGTGTCTAAGTTGGCCCTGCCCCAT +
Preference number: 3 (lower is better)
Translates to: PNYQGPIPLPLT*AMSVSKLALPH
Trigger: ATGGGGCAGGGCCAACTTAGACACTGACATGGCCCAGGTTAATGGGAGTGGGATTGGGCCTTGGTAGTTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591615.1
3UTR-3UTR CAA 90 bp GGTGCTCCTAGTGCTTGTAGAGGGAAACGCTACGTCCGTGCAGTATGGCTCTCCGTGAGCTGCAGTTCATaGAGTGGCTTTAGGTCACAC +
Preference number: 3 (lower is better)
Translates to: GAPSACRGKRYVRAVWLSVSCSS*SGFRSH
Trigger: GTGTGACCTAAAGCCACTCAATGAACTGCAGCTCAC...GGAGAGCCATACTGCACGGACGTAGCGTTTCCCTCTACAAGCACTAGGAGCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
3UTR-3UTR CAA 90 bp TGTCCCCACTGTAGTGTGACCACAAGTGTACTCCAGGGAGAGGGGTACACAGATCACCTTAGGATGGAGTaGCAGGCCTCCCTGAATGCA +
Preference number: 3 (lower is better)
Translates to: CPHCSVTTSVLQGEGYTDHLRME*QASLNA
Trigger: TGCATTCAGGGAGGCCTGCAACTCCATCCTAAGGTG...ATCTGTGTACCCCTCTCCCTGGAGTACACTTGTGGTCACACTACAGTGGGGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
3UTR-3UTR CAA 90 bp CTTGAAGTGAAGGCCCTGAGCCCTGATTCCAACCTCTGCTCCCAGCACACTGCTCTGAGAGGTGAGGGATaGTGGTTACAGGTTGTAACA +
Preference number: 3 (lower is better)
Translates to: LEVKALSPDSNLCSQHTALRGEG*WLQVVT
Trigger: TGTTACAACCTGTAACCACAATCCCTCACCTCTCAG...AGCAGTGTGCTGGGAGCAGAGGTTGGAATCAGGGCTCAGGGCCTTCACTTCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
3UTR TCA 72 bp CATGGACCCCAGCTCCACCTGAACATCAATATACCGTaGGGACATTCCAGAGTCCCTGCAAAAGGTCTCGTG +
Preference number: 3 (lower is better)
Translates to: HGPQLHLNINIP*GHSRVPAKGLV
Trigger: CACGAGACCTTTTGCAGGGACTCTGGAATGTCCTCACGGTATATTGATGTTCAGGTGGAGCTGGGGTCCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
3UTR-3UTR CAA 90 bp AGCGATCCTCCAGCCCTACCCCAAACTGCAGGTTTCCAATTGGTTATGATGTGCGTGAGCTGCAGTTCATaGAGTGGCTTTAGGTCACAC +
Preference number: 3 (lower is better)
Translates to: SDPPALPQTAGFQLVMMCVSCSS*SGFRSH
Trigger: GTGTGACCTAAAGCCACTCAATGAACTGCAGCTCAC...GCACATCATAACCAATTGGAAACCTGCAGTTTGGGGTAGGGCTGGAGGATCGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
3UTR TCA 72 bp GCTTGGCACACAGAGGTGGTCAACACATGTGTTTCTTaGAATGTCACCTTAGGATGGAGTTGCAGGCCTCCC +
Preference number: 3 (lower is better)
Translates to: AWHTEVVNTCVS*NVTLGWSCRPP
Trigger: GGGAGGCCTGCAACTCCATCCTAAGGTGACATTTCAAGAAACACATGTGTTGACCACCTCTGTGTGCCAAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
3UTR GCA 72 bp GGACATTCCAGAGTCCCTGCAAAAGGTCTCGTGAGCTaGAGTTCATTGAGTGGCTTTAGGTCACACGGAGAA +
Preference number: 3 (lower is better)
Translates to: GHSRVPAKGLVS*SSLSGFRSHGE
Trigger: TTCTCCGTGTGACCTAAAGCCACTCAATGAACTGCAGCTCACGAGACCTTTTGCAGGGACTCTGGAATGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
3UTR GCA 72 bp GAGAGGGGTACACAGATGGCACAAGCAGTATACACATaGACACACCAGGTGTGCAGACCAAAGCAAAGTGAG +
Preference number: 3 (lower is better)
Translates to: ERGTQMAQAVYT*THQVCRPKQSE
Trigger: CTCACTTTGCTTTGGTCTGCACACCTGGTGTGTGCATGTGTATACTGCTTGTGCCATCTGTGTACCCCTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
3UTR-3UTR CAA 90 bp AACTGCAGGTTTCCAATTGGTTATGATGTGCCAGAGACCAGGAAATGCCAGAGGGTGAGCTGCAGTTCATaGAGTGGCTTTAGGTCACAC +
Preference number: 3 (lower is better)
Translates to: NCRFPIGYDVPETRKCQRVSCSS*SGFRSH
Trigger: GTGTGACCTAAAGCCACTCAATGAACTGCAGCTCAC...CCTCTGGCATTTCCTGGTCTCTGGCACATCATAACCAATTGGAAACCTGCAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
3UTR-3UTR CAA 90 bp ACAAACCATCTTCCTCTAGCTACACGAGCCTTTCCATCCCATCCAGGCCTCCTGGCTTTATCCTTTCGCTaGAAATGTTTCTCACTCTGG +
Preference number: 3 (lower is better)
Translates to: TNHLPLATRAFPSHPGLLALSFR*KCFSLW
Trigger: CCAGAGTGAGAAACATTTCAAGCGAAAGGATAAAGC...CAGGAGGCCTGGATGGGATGGAAAGGCTCGTGTAGCTAGAGGAAGATGGTTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591615.1
3UTR GCA 72 bp GAACATCAATATACCGTGAGGACATTCCAGAGTCCCTaGAAAAGGTCTCGTGAGCTGCAGTTCATTGAGTGG +
Preference number: 3 (lower is better)
Translates to: EHQYTVRTFQSP*KRSRELQFIEW
Trigger: CCACTCAATGAACTGCAGCTCACGAGACCTTTTGCAGGGACTCTGGAATGTCCTCACGGTATATTGATGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
3UTR-3UTR CAA 90 bp AACTGCAGGTTTCCAATTGGTTATGATGTGCCAGAGACCAGGAAATGCCAGAGGCTGAGAGGTGAGGGATaGTGGTTACAGGTTGTAACA +
Preference number: 3 (lower is better)
Translates to: NCRFPIGYDVPETRKCQRLRGEG*WLQVVT
Trigger: TGTTACAACCTGTAACCACAATCCCTCACCTCTCAG...CCTCTGGCATTTCCTGGTCTCTGGCACATCATAACCAATTGGAAACCTGCAGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
3UTR-3UTR CAA 90 bp ACTCCTCACCCAGTGCTTGGCACACAGAGGTGGTCAACACATGTGTTTCTTGAAACTGCAGGTTTCCAATaGGTTATGATGTGCCAGAGA +
Preference number: 3 (lower is better)
Translates to: TPHPVLGTQRWSTHVFLETAGFQ*VMMCQR
Trigger: TCTCTGGCACATCATAACCAATTGGAAACCTGCAGT...TTCAAGAAACACATGTGTTGACCACCTCTGTGTGCCAAGCACTGGGTGAGGAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
3UTR-3UTR CAA 90 bp TGGTTGCTACCATTTCTTGTCCTTGAGAAAGGTGCTCCTAGTGCTTGTAGAGGGACTGCAGGTTTCCAATaGGTTATGATGTGCCAGAGA +
Preference number: 3 (lower is better)
Translates to: WLLPFLVLEKGAPSACRGTAGFQ*VMMCQR
Trigger: TCTCTGGCACATCATAACCAATTGGAAACCTGCAGT...CCCTCTACAAGCACTAGGAGCACCTTTCTCAAGGACAAGAAATGGTAGCAACCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
3UTR-3UTR CAA 90 bp CTACCTCTACAAGAGTGGAAAGAAAAGTGCTGGCACATGGTAGGGGCTGGGACTTCCCTAAACCCAATGTaGGGAAATAAATCTTGTTCT +
Preference number: 3 (lower is better)
Translates to: LPLQEWKEKCWHMVGAGTSLNPM*GNKSCS
Trigger: AGAACAAGATTTATTTCCCAACATTGGGTTTAGGGA...AGTCCCAGCCCCTACCATGTGCCAGCACTTTTCTTTCCACTCTTGTAGAGGTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591615.1
3UTR-3UTR CAA 90 bp TTGGCAAGGAAAAAGATGGGAAGGGAAAATATGGATGCAAAGGGCGATAGCAAGATGTCAGTGTCTAAGTaGGCCCTGCCCCATTTACTT +
Preference number: 3 (lower is better)
Translates to: LARKKMGRENMDAKGDSKMSVSK*ALPHLL
Trigger: AAGTAAATGGGGCAGGGCCAACTTAGACACTGACAT...CTTGCTATCGCCCTTTGCATCCATATTTTCCCTTCCCATCTTTTTCCTTGCCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000591615.1
3UTR TCA 72 bp AAAGGTAAGCCCTTGGAAAAGGGTTGCCTAAAGAGGTaGCAGGGAGAGATCTGTCCTAGCTTAATTTGTGAG +
Preference number: 3 (lower is better)
Translates to: KGKPLEKGCLKR*QGEICPSLICE
Trigger: CTCACAAATTAAGCTAGGACAGATCTCTCCCTGTCACCTCTTTAGGCAACCCTTTTCCAAGGGCTTACCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592271.1
3UTR GCA 72 bp TTTCCAATTGGTTATGATGTGCCAGAGACCAGGAAATaGCAGAGGGATGTTTGTAACAAAGCTGCCAAACTC +
Preference number: 3 (lower is better)
Translates to: FPIGYDVPETRK*QRDVCNKAAKL
Trigger: GAGTTTGGCAGCTTTGTTACAAACATCCCTCTGGCATTTCCTGGTCTCTGGCACATCATAACCAATTGGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
3UTR TCA 72 bp TGCATCTCTCTCAACTCAGACCAAGCTACAAACTGCTaGACAAGCAACTGCAAACTTATTTTTGTTACATTT +
Preference number: 3 (lower is better)
Translates to: CISLNSDQATNC*TSNCKLIFVTF
Trigger: AAATGTAACAAAAATAAGTTTGCAGTTGCTTGTTCAGCAGTTTGTAGCTTGGTCTGAGTTGAGAGAGATGCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000592271.1
CDS-3UTR TCA 90 bp AGGCTGCTGGATGACAAGCGCCGGCGCTGGGCATTCCGACTGACGGCATTGTCACTCCAGGCTGCTGGATaGCAAGCGCCGGCGCTGGGC +
Preference number: 4 (lower is better)
Translates to: RLLDDKRRRWAFRLTALSLQAAG*QAPALG
Trigger: GCCCAGCGCCGGCGCTTGTCATCCAGCAGCCTGGAG...TGACAATGCCGTCAGTCGGAATGCCCAGCGCCGGCGCTTGTCATCCAGCAGCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591355.1
CDS-3UTR TCA 90 bp CGCTACGTCCGTGCAGTATGGCTCTCCCTTTCCACAGGAGCGATCCTCCAGCCCCTCCAGGCTGCTGGATaGCAAGCGCCGGCGCTGGGC +
Preference number: 4 (lower is better)
Translates to: RYVRAVWLSLSTGAILQPLQAAG*QAPALG
Trigger: GCCCAGCGCCGGCGCTTGTCATCCAGCAGCCTGGAG...GGGCTGGAGGATCGCTCCTGTGGAAAGGGAGAGCCATACTGCACGGACGTAGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
CDS-3UTR CCA 90 bp CTGGATGACAAGCGCCGGCGCTGGGCATTCCGACTGACGGCATTGTCATCAGCCGACAAGCGCCGGCGCTaGGCATTCCGACTGACGGCA +
Preference number: 4 (lower is better)
Translates to: LDDKRRRWAFRLTALSSADKRRR*AFRLTA
Trigger: TGCCGTCAGTCGGAATGCCCAGCGCCGGCGCTTGTC...GGCTGATGACAATGCCGTCAGTCGGAATGCCCAGCGCCGGCGCTTGTCATCCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591355.1
CDS-3UTR TCA 90 bp CAAGCGCCGGCGCTGGGCATTCCGACTGACGGCATTGTCATCAGCCTGCCAGGCAGACGGTGTCAGTGCTaGTCTGGGAGGATGCCATGG +
Preference number: 4 (lower is better)
Translates to: QAPALGIPTDGIVISLPGRRCQC*SGRMPW
Trigger: CCATGGCATCCTCCCAGATCAGCACTGACACCGTCT...GCCTGGCAGGCTGATGACAATGCCGTCAGTCGGAATGCCCAGCGCCGGCGCTTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591355.1
CDS-3UTR TCA 90 bp CTTGAAGTGAAGGCCCTGAGCCCTGATTCCAACCTCTGCTCCCAGCACACTGCTCTCCAGGCTGCTGGATaGCAAGCGCCGGCGCTGGGC +
Preference number: 4 (lower is better)
Translates to: LEVKALSPDSNLCSQHTALQAAG*QAPALG
Trigger: GCCCAGCGCCGGCGCTTGTCATCCAGCAGCCTGGAG...AGCAGTGTGCTGGGAGCAGAGGTTGGAATCAGGGCTCAGGGCCTTCACTTCAAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
CDS-3UTR TCA 90 bp CTCTGCAGCCACACAGAAACGAAGGACCCCCTGGGCACCAGGCTCTTTTTGAGGGCTGGGGAGGGCCCTTaGAGTGAAGGCCCTGAGCCC +
Preference number: 4 (lower is better)
Translates to: LCSHTETKDPLGTRLFLRAGEGP*SEGPEP
Trigger: GGGCTCAGGGCCTTCACTTCAAGGGCCCTCCCCAGC...CCTCAAAAAGAGCCTGGTGCCCAGGGGGTCCTTCGTTTCTGTGTGGCTGCAGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
CDS-3UTR CCA 90 bp ACCAGGCCTTCCCCCATGAGGCAACTCACCAAGGCCTGGCCTGCCCAGGTAGTGGCAGTGGCACCATCTTaGCTCGCTGCAACCTCCACC +
Preference number: 4 (lower is better)
Translates to: TRPSPMRQLTKAWPAQVVAVAPS*LAATST
Trigger: GGTGGAGGTTGCAGCGAGCCAAGATGGTGCCACTGC...CACTACCTGGGCAGGCCAGGCCTTGGTGAGTTGCCTCATGGGGGAAGGCCTGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000591615.1
CDS-3UTR GCA 90 bp AGAAAGGTGCTCCTAGTGCTTGTAGAGGGAAACGCTACGTCCGTGCAGTATGGCTCCTCCACGCCCGCGTaGTGCCGGCTCGTCAGGGCC +
Preference number: 4 (lower is better)
Translates to: RKVLLVLVEGNATSVQYGSSTPA*CRLVRA
Trigger: GGCCCTGACGAGCCGGCAGCACGCGGGCGTGGAGGA...GCCATACTGCACGGACGTAGCGTTTCCCTCTACAAGCACTAGGAGCACCTTTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
CDS-3UTR GCA 90 bp CTGGATGACAAGCGCCGGCGCTGGGCATTCCGACTGACGGCATTGTCATCAGCCCTCCCTCCTCTTCAGTaGCAGGGGCGATGTAGGAGC +
Preference number: 4 (lower is better)
Translates to: LDDKRRRWAFRLTALSSALPPLQ*QGRCRS
Trigger: GCTCCTACATCGCCCCTGGCACTGAAGAGGAGGGAG...GGCTGATGACAATGCCGTCAGTCGGAATGCCCAGCGCCGGCGCTTGTCATCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591355.1
CDS-3UTR GCA 90 bp GACAAGCGCCGGCGCTGGGCATTCCGACTGACGGCATTGTCATCAGCCTGCCAGGTCCTCTGGCCTTCCTaGGTGGGTGATCCATCCTCT +
Preference number: 4 (lower is better)
Translates to: DKRRRWAFRLTALSSACQVLWPS*VGDPSS
Trigger: AGAGGATGGATCACCCACGCAGGAAGGCCAGAGGAC...CTGGCAGGCTGATGACAATGCCGTCAGTCGGAATGCCCAGCGCCGGCGCTTGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591355.1
CDS-3UTR GCA 90 bp CTCTGCAGCCACACAGAAACGAAGGACCCCCTGGGCACCAGGCTCTTTTTGAGGGGAGGGGAGCCCAAGTaGAGAGGCTGGGGCTCAGAC +
Preference number: 4 (lower is better)
Translates to: LCSHTETKDPLGTRLFLRGGEPK*RGWGSD
Trigger: GTCTGAGCCCCAGCCTCTGCACTTGGGCTCCCCTCC...CCTCAAAAAGAGCCTGGTGCCCAGGGGGTCCTTCGTTTCTGTGTGGCTGCAGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
CDS-3UTR CCA 90 bp CTGGCCTCTGCAGCCACACAGAAACGAAGGACCCCCTGGGCACCAGGCTCTTTTGAGGGATCCACGGTGTaGGAGGGCAGGCAGAACTGC +
Preference number: 4 (lower is better)
Translates to: LASAATQKRRTPWAPGSFEGSTV*EGRQNC
Trigger: GCAGTTCTGCCTGCCCTCCCACACCGTGGATCCCTC...AAAAGAGCCTGGTGCCCAGGGGGTCCTTCGTTTCTGTGTGGCTGCAGAGGCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
CDS-3UTR CCA 90 bp CTGGATGACAAGCGCCGGCGCTGGGCATTCCGACTGACGGCATTGTCATCAGCCGTCTGGAGACTCCGCTaGCAGCCCCTCTCCTTCTTC +
Preference number: 4 (lower is better)
Translates to: LDDKRRRWAFRLTALSSAVWRLR*QPLSFF
Trigger: GAAGAAGGAGAGGGGCTGCCAGCGGAGTCTCCAGAC...GGCTGATGACAATGCCGTCAGTCGGAATGCCCAGCGCCGGCGCTTGTCATCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591355.1
CDS-3UTR TCA 90 bp CTGGATGACAAGCGCCGGCGCTGGGCATTCCGACTGACGGCATTGTCATCAGCCGCTGGGCATTCCGACTaGCGGCATTGTCATCAGCCT +
Preference number: 4 (lower is better)
Translates to: LDDKRRRWAFRLTALSSAAGHSD*RHCHQP
Trigger: AGGCTGATGACAATGCCGTCAGTCGGAATGCCCAGC...GGCTGATGACAATGCCGTCAGTCGGAATGCCCAGCGCCGGCGCTTGTCATCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591355.1
CDS-3UTR TCA 90 bp CGCTACGTCCGTGCAGTATGGCTCTCCCTTTCCACAGGAGCGATCCTCCAGCCCCTGTCCTCATCAGGCTaGCTGAGGACCAGCTCCTTG +
Preference number: 4 (lower is better)
Translates to: RYVRAVWLSLSTGAILQPLSSSG*LRTSSL
Trigger: CAAGGAGCTGGTCCTCAGTCAGCCTGATGAGGACAG...GGGCTGGAGGATCGCTCCTGTGGAAAGGGAGAGCCATACTGCACGGACGTAGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
CDS-3UTR GCA 90 bp AGCGATCCTCCAGCCCTACCCCAAACTGCAGGTTTCCAATTGGTTATGATGTGCTCCTCCACGCCCGCGTaGTGCCGGCTCGTCAGGGCC +
Preference number: 4 (lower is better)
Translates to: SDPPALPQTAGFQLVMMCSSTPA*CRLVRA
Trigger: GGCCCTGACGAGCCGGCAGCACGCGGGCGTGGAGGA...GCACATCATAACCAATTGGAAACCTGCAGTTTGGGGTAGGGCTGGAGGATCGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
CDS-3UTR GCA 90 bp GAGGGAAACGCTACGTCCGTGCAGTATGGCTCTCCCTTTCCACAGGAGCGATCCCTCCCAGCACACTGCTaGTGGCCACATGCTGCTGCC +
Preference number: 4 (lower is better)
Translates to: EGNATSVQYGSPFPQERSLPAHC*WPHAAA
Trigger: GGCAGCAGCATGTGGCCAGCAGCAGTGTGCTGGGAG...GGATCGCTCCTGTGGAAAGGGAGAGCCATACTGCACGGACGTAGCGTTTCCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
CDS-3UTR CCA 90 bp GGTGCTCCTAGTGCTTGTAGAGGGAAACGCTACGTCCGTGCAGTATGGCTCTCCAAGTGGAGGAACTGCTaGGGACGGGGTGAGGGGCCC +
Preference number: 4 (lower is better)
Translates to: GAPSACRGKRYVRAVWLSKWRNC*GRGEGP
Trigger: GGGCCCCTCACCCCGTCCCCAGCAGTTCCTCCACTT...GGAGAGCCATACTGCACGGACGTAGCGTTTCCCTCTACAAGCACTAGGAGCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
CDS-3UTR CCA 90 bp CAAGCGCCGGCGCTGGGCATTCCGACTGACGGCATTGTCATCAGCCTGCCAGGCGTGTCAGTGCTGATCTaGGAGGATGCCATGGACATG +
Preference number: 4 (lower is better)
Translates to: QAPALGIPTDGIVISLPGVSVLI*EDAMDM
Trigger: CATGTCCATGGCATCCTCCCAGATCAGCACTGACAC...GCCTGGCAGGCTGATGACAATGCCGTCAGTCGGAATGCCCAGCGCCGGCGCTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591355.1
CDS-3UTR CCA 90 bp AAGCGCCGGCGCTGGGCATTCCGACTGACGGCATTGTCATCAGCCTGCCAGGCATGTAGGAGCCAGACATaGAGGAGACGGTGTCAGTGC +
Preference number: 4 (lower is better)
Translates to: KRRRWAFRLTALSSACQACRSQT*RRRCQC
Trigger: GCACTGACACCGTCTCCTCCATGTCTGGCTCCTACA...TGCCTGGCAGGCTGATGACAATGCCGTCAGTCGGAATGCCCAGCGCCGGCGCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591355.1
CDS-3UTR CCA 90 bp CTGGATGACAAGCGCCGGCGCTGGGCATTCCGACTGACGGCATTGTCATCAGCCAGCAAAGTTGCTGTCTaGAGACTCCGCTGGCAGCCC +
Preference number: 4 (lower is better)
Translates to: LDDKRRRWAFRLTALSSASKVAV*RLRWQP
Trigger: GGGCTGCCAGCGGAGTCTCCAGACAGCAACTTTGCT...GGCTGATGACAATGCCGTCAGTCGGAATGCCCAGCGCCGGCGCTTGTCATCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591355.1
CDS-3UTR CCA 90 bp GACAAGCGCCGGCGCTGGGCATTCCGACTGACGGCATTGTCATCAGCCTGCCAGTCTGGCCTTCCTGCGTaGGTGATCCATCCTCTTCCT +
Preference number: 4 (lower is better)
Translates to: DKRRRWAFRLTALSSACQSGLPA*VIHPLP
Trigger: AGGAAGAGGATGGATCACCCACGCAGGAAGGCCAGA...CTGGCAGGCTGATGACAATGCCGTCAGTCGGAATGCCCAGCGCCGGCGCTTGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591355.1
CDS-3UTR CCA 90 bp CTTGAAGTGAAGGCCCTGAGCCCTGATTCCAACCTCTGCTCCCAGCACACTGCTGACAAGCGCCGGCGCTaGGCATTCCGACTGACGGCA +
Preference number: 4 (lower is better)
Translates to: LEVKALSPDSNLCSQHTADKRRR*AFRLTA
Trigger: TGCCGTCAGTCGGAATGCCCAGCGCCGGCGCTTGTC...AGCAGTGTGCTGGGAGCAGAGGTTGGAATCAGGGCTCAGGGCCTTCACTTCAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
CDS-3UTR CCA 90 bp CGCTACGTCCGTGCAGTATGGCTCTCCCTTTCCACAGGAGCGATCCTCCAGCCCGGCCACCTTCCTGCGTaGGTGATCCATCCTCTTCCT +
Preference number: 4 (lower is better)
Translates to: RYVRAVWLSLSTGAILQPGHLPA*VIHPLP
Trigger: AGGAAGAGGATGGATCACCCACGCAGGAAGGTGGCC...GGGCTGGAGGATCGCTCCTGTGGAAAGGGAGAGCCATACTGCACGGACGTAGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647930.1
CDS-3UTR TCA 90 bp CTGGATGACAAGCGCCGGCGCTGGGCATTCCGACTGACGGCATTGTCATCAGCCGGAGGAAATAGTGGATaGCAGAGGCGTCCCTGTGCA +
Preference number: 4 (lower is better)
Translates to: LDDKRRRWAFRLTALSSAGGNSG*QRRPCA
Trigger: TGCACAGGGACGCCTCTGTCATCCACTATTTCCTCC...GGCTGATGACAATGCCGTCAGTCGGAATGCCCAGCGCCGGCGCTTGTCATCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591355.1
CDS-3UTR TCA 90 bp CTGCTGGATGACAAGCGCCGGCGCTGGGCATTCCGACTGACGGCATTGTCATCAAGGATGCCATGGACATaGCAGACTGGGCCAAGCTGC +
Preference number: 4 (lower is better)
Translates to: LLDDKRRRWAFRLTALSSRMPWT*QTGPSC
Trigger: GCAGCTTGGCCCAGTCTGTCATGTCCATGGCATCCT...TGATGACAATGCCGTCAGTCGGAATGCCCAGCGCCGGCGCTTGTCATCCAGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591355.1
CDS-3UTR TCA 90 bp GATGACAAGCGCCGGCGCTGGGCATTCCGACTGACGGCATTGTCATCAGCCTGCGCCTTCCTGCGTGGGTaGTCCATCCTCTTCCTCTAT +
Preference number: 4 (lower is better)
Translates to: DDKRRRWAFRLTALSSACAFLRG*SILFLY
Trigger: ATAGAGGAAGAGGATGGATCACCCACGCAGGAAGGC...GCAGGCTGATGACAATGCCGTCAGTCGGAATGCCCAGCGCCGGCGCTTGTCATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591355.1
CDS-3UTR GCA 90 bp GTGCCAGAGACCAGGAAATGCCAGAGGGATGTTTGTAACAAAGCTGCCAAACTCTCCTCCACGCCCGCGTaGTGCCGGCTCGTCAGGGCC +
Preference number: 4 (lower is better)
Translates to: VPETRKCQRDVCNKAAKLSSTPA*CRLVRA
Trigger: GGCCCTGACGAGCCGGCAGCACGCGGGCGTGGAGGA...GAGTTTGGCAGCTTTGTTACAAACATCCCTCTGGCATTTCCTGGTCTCTGGCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
CDS-3UTR CCA 90 bp AGGCTGCTGGATGACAAGCGCCGGCGCTGGGCATTCCGACTGACGGCATTGTCAATGGACATGACAGACTaGGCCAAGCTGCTGCTGGCA +
Preference number: 4 (lower is better)
Translates to: RLLDDKRRRWAFRLTALSMDMTD*AKLLLA
Trigger: TGCCAGCAGCAGCTTGGCCCAGTCTGTCATGTCCAT...TGACAATGCCGTCAGTCGGAATGCCCAGCGCCGGCGCTTGTCATCCAGCAGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591355.1
CDS-3UTR CCA 90 bp GATGACAAGCGCCGGCGCTGGGCATTCCGACTGACGGCATTGTCATCAGCCTGCATCCTGCTCTCCAGCTaGGAGGCCAGCAAAGTTGCT +
Preference number: 4 (lower is better)
Translates to: DDKRRRWAFRLTALSSACILLSS*EASKVA
Trigger: AGCAACTTTGCTGGCCTCCCAGCTGGAGAGCAGGAT...GCAGGCTGATGACAATGCCGTCAGTCGGAATGCCCAGCGCCGGCGCTTGTCATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591355.1
CDS-3UTR TCA 90 bp GAGGGAAACGCTACGTCCGTGCAGTATGGCTCTCCCTTTCCACAGGAGCGATCCCCATCTCCAAGCACGTaGAGTGGAGGAACTGCTGGG +
Preference number: 4 (lower is better)
Translates to: EGNATSVQYGSPFPQERSPSPST*SGGTAG
Trigger: CCCAGCAGTTCCTCCACTTCACGTGCTTGGAGATGG...GGATCGCTCCTGTGGAAAGGGAGAGCCATACTGCACGGACGTAGCGTTTCCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
CDS-3UTR TCA 90 bp AACGAAGGACCCCCTGGGCACCAGGCTCTTTTTGAGGCTGCCTTGGAAACAGCCCCATCTCCAAGCACGTaGAGTGGAGGAACTGCTGGG +
Preference number: 4 (lower is better)
Translates to: NEGPPGHQALFEAALETAPSPST*SGGTAG
Trigger: CCCAGCAGTTCCTCCACTTCACGTGCTTGGAGATGG...GGCTGTTTCCAAGGCAGCCTCAAAAAGAGCCTGGTGCCCAGGGGGTCCTTCGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
CDS-3UTR TCA 90 bp GAGGGAAACGCTACGTCCGTGCAGTATGGCTCTCCCTTTCCACAGGAGCGATCCTCTCCAGCATCTTGCTaGGGATGCCCAGTAGGCAGC +
Preference number: 4 (lower is better)
Translates to: EGNATSVQYGSPFPQERSSPASC*GCPVGS
Trigger: GCTGCCTACTGGGCATCCTCAGCAAGATGCTGGAGA...GGATCGCTCCTGTGGAAAGGGAGAGCCATACTGCACGGACGTAGCGTTTCCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
CDS-3UTR TCA 90 bp AGCGATCCTCCAGCCCTACCCCAAACTGCAGGTTTCCAATTGGTTATGATGTGCGCTGGGGAGGGCCCTTaGAGTGAAGGCCCTGAGCCC +
Preference number: 4 (lower is better)
Translates to: SDPPALPQTAGFQLVMMCAGEGP*SEGPEP
Trigger: GGGCTCAGGGCCTTCACTTCAAGGGCCCTCCCCAGC...GCACATCATAACCAATTGGAAACCTGCAGTTTGGGGTAGGGCTGGAGGATCGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
CDS-3UTR TCA 90 bp CGCTACGTCCGTGCAGTATGGCTCTCCCTTTCCACAGGAGCGATCCTCCAGCCCCCTTGGACATGGGACTaGGGCCTTGAGGAATCTTTC +
Preference number: 4 (lower is better)
Translates to: RYVRAVWLSLSTGAILQPPWTWD*GLEESF
Trigger: GAAAGATTCCTCAAGGCCTCAGTCCCATGTCCAAGG...GGGCTGGAGGATCGCTCCTGTGGAAAGGGAGAGCCATACTGCACGGACGTAGCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
CDS-3UTR GCA 90 bp TCTTCCAGTCCTCTAGCAACAAGAGATCCCATACAACCAAGGAGGCTGCAGTTTTCCTCCACGCCCGCGTaGTGCCGGCTCGTCAGGGCC +
Preference number: 4 (lower is better)
Translates to: SSSPLATRDPIQPRRLQFSSTPA*CRLVRA
Trigger: GGCCCTGACGAGCCGGCAGCACGCGGGCGTGGAGGA...AAACTGCAGCCTCCTTGGTTGTATGGGATCTCTTGTTGCTAGAGGACTGGAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592271.1
CDS-3UTR GCA 90 bp CAAGCGCCGGCGCTGGGCATTCCGACTGACGGCATTGTCATCAGCCTGCCAGGCCAGCTTATTGTCCAGTaGTTTCACGCTTGCGATGTC +
Preference number: 4 (lower is better)
Translates to: QAPALGIPTDGIVISLPGQLIVQ*FHACDV
Trigger: GACATCGCAAGCGTGAAAGCACTGGACAATAAGCTG...GCCTGGCAGGCTGATGACAATGCCGTCAGTCGGAATGCCCAGCGCCGGCGCTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591355.1
CDS-3UTR GCA 90 bp CGCTACGTCCGTGCAGTATGGCTCTCCCTTTCCACAGGAGCGATCCTCCAGCCCGAAACGCTACGTCCGTaGAGTATGGCTCTCCCTTTC +
Preference number: 4 (lower is better)
Translates to: RYVRAVWLSLSTGAILQPETLRP*SMALPF
Trigger: GAAAGGGAGAGCCATACTGCACGGACGTAGCGTTTC...GGGCTGGAGGATCGCTCCTGTGGAAAGGGAGAGCCATACTGCACGGACGTAGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
CDS-3UTR GCA 90 bp AACGAAGGACCCCCTGGGCACCAGGCTCTTTTTGAGGCTGCCTTGGAAACAGCCCCACTCCTCACCCAGTaGTTGGCACACAGAGGTGGT +
Preference number: 4 (lower is better)
Translates to: NEGPPGHQALFEAALETAPLLTQ*LAHRGG
Trigger: ACCACCTCTGTGTGCCAAGCACTGGGTGAGGAGTGG...GGCTGTTTCCAAGGCAGCCTCAAAAAGAGCCTGGTGCCCAGGGGGTCCTTCGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
CDS-3UTR GCA 90 bp CTGGCCTCTGCAGCCACACAGAAACGAAGGACCCCCTGGGCACCAGGCTCTTTTTGCACTCCTGGCCTCTaGAGCCACACAGAAACGAAG +
Preference number: 4 (lower is better)
Translates to: LASAATQKRRTPWAPGSFCTPGL*SHTETK
Trigger: CTTCGTTTCTGTGTGGCTGCAGAGGCCAGGAGTGCA...AAAAGAGCCTGGTGCCCAGGGGGTCCTTCGTTTCTGTGTGGCTGCAGAGGCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
CDS-3UTR GCA 90 bp CCAATCCCACTCCCATTAACCTGGGCCATGTCAGTGTCTAAGTTGGCCCTGCCCGAGGAAGCCCAACCCTaGCTCCTACCCAGCTGCTCT +
Preference number: 4 (lower is better)
Translates to: PIPLPLTWAMSVSKLALPEEAQP*LLPSCS
Trigger: AGAGCAGCTGGGTAGGAGGCAGGGTTGGGCTTCCTC...GGGCAGGGCCAACTTAGACACTGACATGGCCCAGGTTAATGGGAGTGGGATTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591615.1
CDS-3UTR CCA 90 bp CGCTACGTCCGTGCAGTATGGCTCTCCCTTTCCACAGGAGCGATCCTCCAGCCCGGGGTTAAAGCTGGTTaGGGACAAGGGGCCCAATTT +
Preference number: 4 (lower is better)
Translates to: RYVRAVWLSLSTGAILQPGVKAG*GQGAQF
Trigger: AAATTGGGCCCCTTGTCCCCAACCAGCTTTAACCCC...GGGCTGGAGGATCGCTCCTGTGGAAAGGGAGAGCCATACTGCACGGACGTAGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
CDS-3UTR CCA 90 bp CTGGCCTCTGCAGCCACACAGAAACGAAGGACCCCCTGGGCACCAGGCTCTTTTTCCTCACCCAGTGCTTaGCACACAGAGGTGGTCAAC +
Preference number: 4 (lower is better)
Translates to: LASAATQKRRTPWAPGSFSSPSA*HTEVVN
Trigger: GTTGACCACCTCTGTGTGCCAAGCACTGGGTGAGGA...AAAAGAGCCTGGTGCCCAGGGGGTCCTTCGTTTCTGTGTGGCTGCAGAGGCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
CDS-3UTR TCA 90 bp GGTGCTCCTAGTGCTTGTAGAGGGAAACGCTACGTCCGTGCAGTATGGCTCTCCGGCAGGCAGAACTGCTaGCACACTCCTCGCTTGTAC +
Preference number: 4 (lower is better)
Translates to: GAPSACRGKRYVRAVWLSGRQNC*HTPRLY
Trigger: GTACAAGCGAGGAGTGTGTCAGCAGTTCTGCCTGCC...GGAGAGCCATACTGCACGGACGTAGCGTTTCCCTCTACAAGCACTAGGAGCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
CDS-3UTR TCA 90 bp GAGGGAAACGCTACGTCCGTGCAGTATGGCTCTCCCTTTCCACAGGAGCGATCCGCCTTCCTGCGTGGGTaGTCCATCCTCTTCCTCTAT +
Preference number: 4 (lower is better)
Translates to: EGNATSVQYGSPFPQERSAFLRG*SILFLY
Trigger: ATAGAGGAAGAGGATGGATCACCCACGCAGGAAGGC...GGATCGCTCCTGTGGAAAGGGAGAGCCATACTGCACGGACGTAGCGTTTCCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000319945.10
CDS-3UTR TCA 90 bp CATTTCTTGTCCTTGAGAAAGGTGCTCCTAGTGCTTGTAGAGGGAAACGCTACGCTCCAGGCTGCTGGATaGCAAGCGCCGGCGCTGGGC +
Preference number: 4 (lower is better)
Translates to: HFLSLRKVLLVLVEGNATLQAAG*QAPALG
Trigger: GCCCAGCGCCGGCGCTTGTCATCCAGCAGCCTGGAG...CGTAGCGTTTCCCTCTACAAGCACTAGGAGCACCTTTCTCAAGGACAAGAAATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
CDS-3UTR GCA 90 bp GATGACAAGCGCCGGCGCTGGGCATTCCGACTGACGGCATTGTCATCAGCCTGCAACATCATTTCCCTCTaGATCCTGCTCTCCAGCTGG +
Preference number: 4 (lower is better)
Translates to: DDKRRRWAFRLTALSSACNIISL*ILLSSW
Trigger: CCAGCTGGAGAGCAGGATGCAGAGGGAAATGATGTT...GCAGGCTGATGACAATGCCGTCAGTCGGAATGCCCAGCGCCGGCGCTTGTCATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591355.1
CDS-3UTR GCA 90 bp GGTGCTCCTAGTGCTTGTAGAGGGAAACGCTACGTCCGTGCAGTATGGCTCTCCGTCCTCTGGCCTTCCTaGGTGGGTGATCCATCCTCT +
Preference number: 4 (lower is better)
Translates to: GAPSACRGKRYVRAVWLSVLWPS*VGDPSS
Trigger: AGAGGATGGATCACCCACGCAGGAAGGCCAGAGGAC...GGAGAGCCATACTGCACGGACGTAGCGTTTCCCTCTACAAGCACTAGGAGCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000319945.10
CDS-3UTR GCA 90 bp CGATCCTCCAGCCCTACCCCAAACTGCAGGTTTCCAATTGGTTATGATGTGCCAGGAGGGGAGCCCAAGTaGAGAGGCTGGGGCTCAGAC +
Preference number: 4 (lower is better)
Translates to: RSSSPTPNCRFPIGYDVPGGEPK*RGWGSD
Trigger: GTCTGAGCCCCAGCCTCTGCACTTGGGCTCCCCTCC...TGGCACATCATAACCAATTGGAAACCTGCAGTTTGGGGTAGGGCTGGAGGATCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
CDS-3UTR GCA 90 bp GAGGGAAACGCTACGTCCGTGCAGTATGGCTCTCCCTTTCCACAGGAGCGATCCTTCAGGCCATTCTCCTaGCTCAGCCTCCCAAGTAGC +
Preference number: 4 (lower is better)
Translates to: EGNATSVQYGSPFPQERSFRPFS*LSLPSS
Trigger: GCTACTTGGGAGGCTGAGGCAGGAGAATGGCCTGAA...GGATCGCTCCTGTGGAAAGGGAGAGCCATACTGCACGGACGTAGCGTTTCCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
CDS-3UTR GCA 90 bp GAGGGAAACGCTACGTCCGTGCAGTATGGCTCTCCCTTTCCACAGGAGCGATCCCTGGCCACATGCTGCTaGCTGAACTTAGCTCAAGGC +
Preference number: 4 (lower is better)
Translates to: EGNATSVQYGSPFPQERSLATCC*LNLAQG
Trigger: GCCTTGAGCTAAGTTCAGGCAGCAGCATGTGGCCAG...GGATCGCTCCTGTGGAAAGGGAGAGCCATACTGCACGGACGTAGCGTTTCCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
CDS-3UTR GCA 90 bp CTCTGCAGCCACACAGAAACGAAGGACCCCCTGGGCACCAGGCTCTTTTTGAGGAGAGGACTAAGCACCTaGTGCGAGGAAGGACAGGGA +
Preference number: 4 (lower is better)
Translates to: LCSHTETKDPLGTRLFLRRGLST*CEEGQG
Trigger: TCCCTGTCCTTCCTCGCAGCAGGTGCTTAGTCCTCT...CCTCAAAAAGAGCCTGGTGCCCAGGGGGTCCTTCGTTTCTGTGTGGCTGCAGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
CDS-3UTR GCA 90 bp GATGACAAGCGCCGGCGCTGGGCATTCCGACTGACGGCATTGTCATCAGCCTGCGCATTGTCATCAGCCTaGCAGGCACCTATTCCTCAA +
Preference number: 4 (lower is better)
Translates to: DDKRRRWAFRLTALSSACALSSA*QAPIPQ
Trigger: TTGAGGAATAGGTGCCTGGCAGGCTGATGACAATGC...GCAGGCTGATGACAATGCCGTCAGTCGGAATGCCCAGCGCCGGCGCTTGTCATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591355.1
CDS-3UTR CCA 90 bp ACCAGGCCTTCCCCCATGAGGCAACTCACCAAGGCCTGGCCTGCCCAGGTAGTGGTACCCAGCAGTACATaGCAATGGCCAAAATACTCG +
Preference number: 4 (lower is better)
Translates to: TRPSPMRQLTKAWPAQVVVPSST*QWPKYS
Trigger: CGAGTATTTTGGCCATTGCCATGTACTGCTGGGTAC...CACTACCTGGGCAGGCCAGGCCTTGGTGAGTTGCCTCATGGGGGAAGGCCTGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000591615.1
CDS-3UTR CCA 90 bp GAGGGAAACGCTACGTCCGTGCAGTATGGCTCTCCCTTTCCACAGGAGCGATCCATCCTGCTCTCCAGCTaGGAGGCCAGCAAAGTTGCT +
Preference number: 4 (lower is better)
Translates to: EGNATSVQYGSPFPQERSILLSS*EASKVA
Trigger: AGCAACTTTGCTGGCCTCCCAGCTGGAGAGCAGGAT...GGATCGCTCCTGTGGAAAGGGAGAGCCATACTGCACGGACGTAGCGTTTCCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
CDS-3UTR CCA 90 bp CTGGCCTCTGCAGCCACACAGAAACGAAGGACCCCCTGGGCACCAGGCTCTTTTGACCAGCTCCTTGGATaGAGTATTTCTGTGGGCCAG +
Preference number: 4 (lower is better)
Translates to: LASAATQKRRTPWAPGSFDQLLG*SISVGQ
Trigger: CTGGCCCACAGAAATACTCCATCCAAGGAGCTGGTC...AAAAGAGCCTGGTGCCCAGGGGGTCCTTCGTTTCTGTGTGGCTGCAGAGGCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
CDS-3UTR CCA 90 bp GATGACAAGCGCCGGCGCTGGGCATTCCGACTGACGGCATTGTCATCAGCCTGCATTCCTCAATGTTTATaGGGCAGGACTCCGGAGCTG +
Preference number: 4 (lower is better)
Translates to: DDKRRRWAFRLTALSSACIPQCL*GRTPEL
Trigger: CAGCTCCGGAGTCCTGCCCCATAAACATTGAGGAAT...GCAGGCTGATGACAATGCCGTCAGTCGGAATGCCCAGCGCCGGCGCTTGTCATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591355.1
CDS-3UTR TCA 90 bp CGCTACGTCCGTGCAGTATGGCTCTCCCTTTCCACAGGAGCGATCCTCCAGCCCGTCAATAGCTCCAGATaGCGACAAGGTGAGATTCTC +
Preference number: 4 (lower is better)
Translates to: RYVRAVWLSLSTGAILQPVNSSR*RQGEIL
Trigger: GAGAATCTCACCTTGTCGTCATCTGGAGCTATTGAC...GGGCTGGAGGATCGCTCCTGTGGAAAGGGAGAGCCATACTGCACGGACGTAGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
CDS-3UTR TCA 90 bp GGTGCTCCTAGTGCTTGTAGAGGGAAACGCTACGTCCGTGCAGTATGGCTCTCCGGAGGAAATAGTGGATaGCAGAGGCGTCCCTGTGCA +
Preference number: 4 (lower is better)
Translates to: GAPSACRGKRYVRAVWLSGGNSG*QRRPCA
Trigger: TGCACAGGGACGCCTCTGTCATCCACTATTTCCTCC...GGAGAGCCATACTGCACGGACGTAGCGTTTCCCTCTACAAGCACTAGGAGCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
CDS-3UTR TCA 90 bp CTTGAAGTGAAGGCCCTGAGCCCTGATTCCAACCTCTGCTCCCAGCACACTGCTGGAGGAAATAGTGGATaGCAGAGGCGTCCCTGTGCA +
Preference number: 4 (lower is better)
Translates to: LEVKALSPDSNLCSQHTAGGNSG*QRRPCA
Trigger: TGCACAGGGACGCCTCTGTCATCCACTATTTCCTCC...AGCAGTGTGCTGGGAGCAGAGGTTGGAATCAGGGCTCAGGGCCTTCACTTCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
CDS-3UTR TCA 90 bp GGTGCTCCTAGTGCTTGTAGAGGGAAACGCTACGTCCGTGCAGTATGGCTCTCCGGTTCCAGTTCCCTCTaGGAGGTGAGGGATTGTGGT +
Preference number: 4 (lower is better)
Translates to: GAPSACRGKRYVRAVWLSGSSSL*EVRDCG
Trigger: ACCACAATCCCTCACCTCTCAGAGGGAACTGGAACC...GGAGAGCCATACTGCACGGACGTAGCGTTTCCCTCTACAAGCACTAGGAGCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
CDS-3UTR TCA 90 bp CTTGAAGTGAAGGCCCTGAGCCCTGATTCCAACCTCTGCTCCCAGCACACTGCTGGTTCCAGTTCCCTCTaGGAGGTGAGGGATTGTGGT +
Preference number: 4 (lower is better)
Translates to: LEVKALSPDSNLCSQHTAGSSSL*EVRDCG
Trigger: ACCACAATCCCTCACCTCTCAGAGGGAACTGGAACC...AGCAGTGTGCTGGGAGCAGAGGTTGGAATCAGGGCTCAGGGCCTTCACTTCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
CDS-3UTR TCA 90 bp CTTGAAGTGAAGGCCCTGAGCCCTGATTCCAACCTCTGCTCCCAGCACACTGCTGCACCAGGCTCTTTTTaGGGCTGCCTTGGAAACAGC +
Preference number: 4 (lower is better)
Translates to: LEVKALSPDSNLCSQHTAAPGSF*GCLGNS
Trigger: GCTGTTTCCAAGGCAGCCTCAAAAAGAGCCTGGTGC...AGCAGTGTGCTGGGAGCAGAGGTTGGAATCAGGGCTCAGGGCCTTCACTTCAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
CDS-3UTR TCA 90 bp CTACCTCTACAAGAGTGGAAAGAAAAGTGCTGGCACATGGTAGGGGCTGGGACTCCAGGCCTTCCCCCATaGGGCAACTCACCAAGGCCT +
Preference number: 4 (lower is better)
Translates to: LPLQEWKEKCWHMVGAGTPGLPP*GNSPRP
Trigger: AGGCCTTGGTGAGTTGCCTCATGGGGGAAGGCCTGG...AGTCCCAGCCCCTACCATGTGCCAGCACTTTTCTTTCCACTCTTGTAGAGGTAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000591615.1
CDS-3UTR GCA 90 bp AGCGATCCTCCAGCCCTACCCCAAACTGCAGGTTTCCAATTGGTTATGATGTGCGTGAAGTGGAGGAACTaGTGGGGACGGGGTGAGGGG +
Preference number: 4 (lower is better)
Translates to: SDPPALPQTAGFQLVMMCVKWRN*WGRGEG
Trigger: CCCCTCACCCCGTCCCCAGCAGTTCCTCCACTTCAC...GCACATCATAACCAATTGGAAACCTGCAGTTTGGGGTAGGGCTGGAGGATCGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
CDS-3UTR GCA 90 bp TGTCCCCACTGTAGTGTGACCACAAGTGTACTCCAGGGAGAGGGGTACACAGATCTCCCTCCTCTTCAGTaGCAGGGGCGATGTAGGAGC +
Preference number: 4 (lower is better)
Translates to: CPHCSVTTSVLQGEGYTDLPPLQ*QGRCRS
Trigger: GCTCCTACATCGCCCCTGGCACTGAAGAGGAGGGAG...ATCTGTGTACCCCTCTCCCTGGAGTACACTTGTGGTCACACTACAGTGGGGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
CDS-3UTR GCA 90 bp GAGGGAAACGCTACGTCCGTGCAGTATGGCTCTCCCTTTCCACAGGAGCGATCCGAAACGCTACGTCCGTaGAGTATGGCTCTCCCTTTC +
Preference number: 4 (lower is better)
Translates to: EGNATSVQYGSPFPQERSETLRP*SMALPF
Trigger: GAAAGGGAGAGCCATACTGCACGGACGTAGCGTTTC...GGATCGCTCCTGTGGAAAGGGAGAGCCATACTGCACGGACGTAGCGTTTCCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
CDS-3UTR GCA 90 bp AGAAAGGTGCTCCTAGTGCTTGTAGAGGGAAACGCTACGTCCGTGCAGTATGGCCTGCTCCCAGCACACTaGTGCTGGCCACATGCTGCT +
Preference number: 4 (lower is better)
Translates to: RKVLLVLVEGNATSVQYGLLPAH*CWPHAA
Trigger: AGCAGCATGTGGCCAGCAGCAGTGTGCTGGGAGCAG...GCCATACTGCACGGACGTAGCGTTTCCCTCTACAAGCACTAGGAGCACCTTTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
CDS-3UTR GCA 90 bp TGTCCCCACTGTAGTGTGACCACAAGTGTACTCCAGGGAGAGGGGTACACAGATCTGCTCCCAGCACACTaGTGCTGGCCACATGCTGCT +
Preference number: 4 (lower is better)
Translates to: CPHCSVTTSVLQGEGYTDLLPAH*CWPHAA
Trigger: AGCAGCATGTGGCCAGCAGCAGTGTGCTGGGAGCAG...ATCTGTGTACCCCTCTCCCTGGAGTACACTTGTGGTCACACTACAGTGGGGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
CDS-3UTR GCA 90 bp GGTGCTCCTAGTGCTTGTAGAGGGAAACGCTACGTCCGTGCAGTATGGCTCTCCTGCACTCCTGGCCTCTaGAGCCACACAGAAACGAAG +
Preference number: 4 (lower is better)
Translates to: GAPSACRGKRYVRAVWLSCTPGL*SHTETK
Trigger: CTTCGTTTCTGTGTGGCTGCAGAGGCCAGGAGTGCA...GGAGAGCCATACTGCACGGACGTAGCGTTTCCCTCTACAAGCACTAGGAGCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
CDS-3UTR GCA 90 bp CTGGCCTCTGCAGCCACACAGAAACGAAGGACCCCCTGGGCACCAGGCTCTTTTAAGCTCCCTGTCACCTaGTGCTTCTGGGCTCATATT +
Preference number: 4 (lower is better)
Translates to: LASAATQKRRTPWAPGSFKLPVT*CFWAHI
Trigger: AATATGAGCCCAGAAGCAGCAGGTGACAGGGAGCTT...AAAAGAGCCTGGTGCCCAGGGGGTCCTTCGTTTCTGTGTGGCTGCAGAGGCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
CDS-3UTR GCA 90 bp AGAAAGGTGCTCCTAGTGCTTGTAGAGGGAAACGCTACGTCCGTGCAGTATGGCGAGTGTGGTGGTCTGTaGCCAGGAGATGCCTCAGCG +
Preference number: 4 (lower is better)
Translates to: RKVLLVLVEGNATSVQYGECGGL*PGDASA
Trigger: CGCTGAGGCATCTCCTGGGCACAGACCACCACACTC...GCCATACTGCACGGACGTAGCGTTTCCCTCTACAAGCACTAGGAGCACCTTTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
CDS-3UTR CCA 90 bp AACGAAGGACCCCCTGGGCACCAGGCTCTTTTTGAGGCTGCCTTGGAAACAGCCTGCACAGTCTCCGACTaGAGGCTGTTGTCTTTGGGA +
Preference number: 4 (lower is better)
Translates to: NEGPPGHQALFEAALETACTVSD*RLLSLG
Trigger: TCCCAAAGACAACAGCCTCCAGTCGGAGACTGTGCA...GGCTGTTTCCAAGGCAGCCTCAAAAAGAGCCTGGTGCCCAGGGGGTCCTTCGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
CDS-3UTR CCA 90 bp CAATATACCGTGAGGACATTCCAGAGTCCCTGCAAAAGGTCTCGTGAGCTGCAGGAGGGATCCACGGTGTaGGAGGGCAGGCAGAACTGC +
Preference number: 4 (lower is better)
Translates to: QYTVRTFQSPCKRSRELQEGSTV*EGRQNC
Trigger: GCAGTTCTGCCTGCCCTCCCACACCGTGGATCCCTC...CTGCAGCTCACGAGACCTTTTGCAGGGACTCTGGAATGTCCTCACGGTATATTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
CDS-3UTR CCA 90 bp CTACCTCTACAAGAGTGGAAAGAAAAGTGCTGGCACATGGTAGGGGCTGGGACTGAGGGATCCACGGTGTaGGAGGGCAGGCAGAACTGC +
Preference number: 4 (lower is better)
Translates to: LPLQEWKEKCWHMVGAGTEGSTV*EGRQNC
Trigger: GCAGTTCTGCCTGCCCTCCCACACCGTGGATCCCTC...AGTCCCAGCCCCTACCATGTGCCAGCACTTTTCTTTCCACTCTTGTAGAGGTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591615.1
CDS-3UTR CCA 90 bp CTTGAAGTGAAGGCCCTGAGCCCTGATTCCAACCTCTGCTCCCAGCACACTGCTTGTAGGAGCCAGACATaGAGGAGACGGTGTCAGTGC +
Preference number: 4 (lower is better)
Translates to: LEVKALSPDSNLCSQHTACRSQT*RRRCQC
Trigger: GCACTGACACCGTCTCCTCCATGTCTGGCTCCTACA...AGCAGTGTGCTGGGAGCAGAGGTTGGAATCAGGGCTCAGGGCCTTCACTTCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
CDS-3UTR CCA 90 bp TGTCCCCACTGTAGTGTGACCACAAGTGTACTCCAGGGAGAGGGGTACACAGATGTCTGGAGACTCCGCTaGCAGCCCCTCTCCTTCTTC +
Preference number: 4 (lower is better)
Translates to: CPHCSVTTSVLQGEGYTDVWRLR*QPLSFF
Trigger: GAAGAAGGAGAGGGGCTGCCAGCGGAGTCTCCAGAC...ATCTGTGTACCCCTCTCCCTGGAGTACACTTGTGGTCACACTACAGTGGGGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
CDS-3UTR CCA 90 bp GAGGGAAACGCTACGTCCGTGCAGTATGGCTCTCCCTTTCCACAGGAGCGATCCTACGTCCGTGCAGTATaGCTCTCCCTTTCCACAGGA +
Preference number: 4 (lower is better)
Translates to: EGNATSVQYGSPFPQERSYVRAV*LSLSTG
Trigger: TCCTGTGGAAAGGGAGAGCCATACTGCACGGACGTA...GGATCGCTCCTGTGGAAAGGGAGAGCCATACTGCACGGACGTAGCGTTTCCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
CDS-3UTR CCA 90 bp GTCCTTGAGAAAGGTGCTCCTAGTGCTTGTAGAGGGAAACGCTACGTCCGTGCAGCAGTGGCACGATCTTaGCTCACCGCAACCTCCACC +
Preference number: 4 (lower is better)
Translates to: VLEKGAPSACRGKRYVRAAVARS*LTATST
Trigger: GGTGGAGGTTGCGGTGAGCCAAGATCGTGCCACTGC...TGCACGGACGTAGCGTTTCCCTCTACAAGCACTAGGAGCACCTTTCTCAAGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
CDS-3UTR CCA 90 bp AGCGATCCTCCAGCCCTACCCCAAACTGCAGGTTTCCAATTGGTTATGATGTGCGGACAGGACAGGAGGTaGTCTGTGTGCCACCACCCC +
Preference number: 4 (lower is better)
Translates to: SDPPALPQTAGFQLVMMCGQDRR*SVCHHP
Trigger: GGGGTGGTGGCACACAGACCACCTCCTGTCCTGTCC...GCACATCATAACCAATTGGAAACCTGCAGTTTGGGGTAGGGCTGGAGGATCGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
CDS-3UTR CCA 90 bp CAATATACCGTGAGGACATTCCAGAGTCCCTGCAAAAGGTCTCGTGAGCTGCAGTTAGGCTGTGCCCTGTaGGAGAAGCCAGGCCCCACC +
Preference number: 4 (lower is better)
Translates to: QYTVRTFQSPCKRSRELQLGCAL*EKPGPT
Trigger: GGTGGGGCCTGGCTTCTCCCACAGGGCACAGCCTAA...CTGCAGCTCACGAGACCTTTTGCAGGGACTCTGGAATGTCCTCACGGTATATTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
CDS-3UTR CCA 90 bp CGATCCTCCAGCCCTACCCCAAACTGCAGGTTTCCAATTGGTTATGATGTGCCATTAGGCTGTGCCCTGTaGGAGAAGCCAGGCCCCACC +
Preference number: 4 (lower is better)
Translates to: RSSSPTPNCRFPIGYDVPLGCAL*EKPGPT
Trigger: GGTGGGGCCTGGCTTCTCCCACAGGGCACAGCCTAA...TGGCACATCATAACCAATTGGAAACCTGCAGTTTGGGGTAGGGCTGGAGGATCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
CDS-3UTR TCA 90 bp AGGCTCTCCATCACTTCCTTTGGGGACCTGGGCACCAAACTGAGAATCACTGGTGGCAGGCAGAACTGCTaGCACACTCCTCGCTTGTAC +
Preference number: 4 (lower is better)
Translates to: RLSITSFGDLGTKLRITGGRQNC*HTPRLY
Trigger: GTACAAGCGAGGAGTGTGTCAGCAGTTCTGCCTGCC...ACCAGTGATTCTCAGTTTGGTGCCCAGGTCCCCAAAGGAAGTGATGGAGAGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
CDS-3UTR TCA 90 bp TTTGGGGACCTGGGCACCAAACTGAGAATCACTGGTCCACATTTCTCTCAACCACTCATGGCTCGGATCTaGAGCAGTGCCCGGAAGGGC +
Preference number: 4 (lower is better)
Translates to: FGDLGTKLRITGPHFSQPLMARI*SSARKG
Trigger: GCCCTTCCGGGCACTGCTTCAGATCCGAGCCATGAG...TGGTTGAGAGAAATGTGGACCAGTGATTCTCAGTTTGGTGCCCAGGTCCCCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
CDS-3UTR TCA 90 bp AGAAAGGTGCTCCTAGTGCTTGTAGAGGGAAACGCTACGTCCGTGCAGTATGGCCCATCTCCAAGCACGTaGAGTGGAGGAACTGCTGGG +
Preference number: 4 (lower is better)
Translates to: RKVLLVLVEGNATSVQYGPSPST*SGGTAG
Trigger: CCCAGCAGTTCCTCCACTTCACGTGCTTGGAGATGG...GCCATACTGCACGGACGTAGCGTTTCCCTCTACAAGCACTAGGAGCACCTTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
CDS-3UTR TCA 90 bp AGGCTCTCCATCACTTCCTTTGGGGACCTGGGCACCAAACTGAGAATCACTGGTAGGATGCCATGGACATaGCAGACTGGGCCAAGCTGC +
Preference number: 4 (lower is better)
Translates to: RLSITSFGDLGTKLRITGRMPWT*QTGPSC
Trigger: GCAGCTTGGCCCAGTCTGTCATGTCCATGGCATCCT...ACCAGTGATTCTCAGTTTGGTGCCCAGGTCCCCAAAGGAAGTGATGGAGAGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
CDS-3UTR TCA 90 bp TGTCCCCACTGTAGTGTGACCACAAGTGTACTCCAGGGAGAGGGGTACACAGATAGGATGCCATGGACATaGCAGACTGGGCCAAGCTGC +
Preference number: 4 (lower is better)
Translates to: CPHCSVTTSVLQGEGYTDRMPWT*QTGPSC
Trigger: GCAGCTTGGCCCAGTCTGTCATGTCCATGGCATCCT...ATCTGTGTACCCCTCTCCCTGGAGTACACTTGTGGTCACACTACAGTGGGGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
CDS-3UTR TCA 90 bp GTCCTTGAGAAAGGTGCTCCTAGTGCTTGTAGAGGGAAACGCTACGTCCGTGCAAGACGGTGTCAGTGCTaGTCTGGGAGGATGCCATGG +
Preference number: 4 (lower is better)
Translates to: VLEKGAPSACRGKRYVRARRCQC*SGRMPW
Trigger: CCATGGCATCCTCCCAGATCAGCACTGACACCGTCT...TGCACGGACGTAGCGTTTCCCTCTACAAGCACTAGGAGCACCTTTCTCAAGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
CDS-3UTR TCA 90 bp AGAAAGGTGCTCCTAGTGCTTGTAGAGGGAAACGCTACGTCCGTGCAGTATGGCAGACGGTGTCAGTGCTaGTCTGGGAGGATGCCATGG +
Preference number: 4 (lower is better)
Translates to: RKVLLVLVEGNATSVQYGRRCQC*SGRMPW
Trigger: CCATGGCATCCTCCCAGATCAGCACTGACACCGTCT...GCCATACTGCACGGACGTAGCGTTTCCCTCTACAAGCACTAGGAGCACCTTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
CDS-3UTR TCA 90 bp CTCAAGGCTCTCCATCACTTCCTTTGGGGACCTGGGCACCAAACTGAGAATCACCATCAGGGCAGGATGTaGGCCACAACCACTAGGCAG +
Preference number: 4 (lower is better)
Translates to: LKALHHFLWGPGHQTENHHQGRM*ATTTRQ
Trigger: CTGCCTAGTGGTTGTGGCTCACATCCTGCCCTGATG...GTGATTCTCAGTTTGGTGCCCAGGTCCCCAAAGGAAGTGATGGAGAGCCTTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
CDS-3UTR TCA 90 bp ACTCCTCACCCAGTGCTTGGCACACAGAGGTGGTCAACACATGTGTTTCTTGAAACCCCAACTCCCAGGTaGGGTGGGCAGGACCCTAAC +
Preference number: 4 (lower is better)
Translates to: TPHPVLGTQRWSTHVFLETPTPR*GGQDPN
Trigger: GTTAGGGTCCTGCCCACCTCACCTGGGAGTTGGGGT...TTCAAGAAACACATGTGTTGACCACCTCTGTGTGCCAAGCACTGGGTGAGGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
CDS-3UTR GCA 90 bp CGATCCTCCAGCCCTACCCCAAACTGCAGGTTTCCAATTGGTTATGATGTGCCATCGGATCTGAAGCAGTaGCCGGAAGGGCAGTCGGCA +
Preference number: 4 (lower is better)
Translates to: RSSSPTPNCRFPIGYDVPSDLKQ*PEGQSA
Trigger: TGCCGACTGCCCTTCCGGGCACTGCTTCAGATCCGA...TGGCACATCATAACCAATTGGAAACCTGCAGTTTGGGGTAGGGCTGGAGGATCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
CDS-3UTR GCA 90 bp GAAATTAGCCCATGGACCCCAGCTCCACCTGAACATCAATATACCGTGAGGACAGTGAAGTGGAGGAACTaGTGGGGACGGGGTGAGGGG +
Preference number: 4 (lower is better)
Translates to: EISPWTPAPPEHQYTVRTVKWRN*WGRGEG
Trigger: CCCCTCACCCCGTCCCCAGCAGTTCCTCCACTTCAC...TGTCCTCACGGTATATTGATGTTCAGGTGGAGCTGGGGTCCATGGGCTAATTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
CDS-3UTR GCA 90 bp CTTGAAGTGAAGGCCCTGAGCCCTGATTCCAACCTCTGCTCCCAGCACACTGCTGCAGGTGGCCATCACTaGCATATGAAGGGAGCATTC +
Preference number: 4 (lower is better)
Translates to: LEVKALSPDSNLCSQHTAAGGHH*HMKGAF
Trigger: GAATGCTCCCTTCATATGGCAGTGATGGCCACCTGC...AGCAGTGTGCTGGGAGCAGAGGTTGGAATCAGGGCTCAGGGCCTTCACTTCAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
CDS-3UTR GCA 90 bp CCTGAACATCAATATACCGTGAGGACATTCCAGAGTCCCTGCAAAAGGTCTCGTGGAGGGGAGCCCAAGTaGAGAGGCTGGGGCTCAGAC +
Preference number: 4 (lower is better)
Translates to: PEHQYTVRTFQSPCKRSRGGEPK*RGWGSD
Trigger: GTCTGAGCCCCAGCCTCTGCACTTGGGCTCCCCTCC...ACGAGACCTTTTGCAGGGACTCTGGAATGTCCTCACGGTATATTGATGTTCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
CDS-3UTR GCA 90 bp GGTGCTCCTAGTGCTTGTAGAGGGAAACGCTACGTCCGTGCAGTATGGCTCTCCACTGTGAATACTACCTaGAGGGGACAGGACAGGAGG +
Preference number: 4 (lower is better)
Translates to: GAPSACRGKRYVRAVWLSTVNTT*RGQDRR
Trigger: CCTCCTGTCCTGTCCCCTGCAGGTAGTATTCACAGT...GGAGAGCCATACTGCACGGACGTAGCGTTTCCCTCTACAAGCACTAGGAGCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
CDS-3UTR GCA 90 bp AGCGATCCTCCAGCCCTACCCCAAACTGCAGGTTTCCAATTGGTTATGATGTGCGAGTGTGGTGGTCTGTaGCCAGGAGATGCCTCAGCG +
Preference number: 4 (lower is better)
Translates to: SDPPALPQTAGFQLVMMCECGGL*PGDASA
Trigger: CGCTGAGGCATCTCCTGGGCACAGACCACCACACTC...GCACATCATAACCAATTGGAAACCTGCAGTTTGGGGTAGGGCTGGAGGATCGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
CDS-3UTR CCA 90 bp CAATATACCGTGAGGACATTCCAGAGTCCCTGCAAAAGGTCTCGTGAGCTGCAGGGGTTCTTGGGGAGGTaGGGCGGCGTAAGGAAACAC +
Preference number: 4 (lower is better)
Translates to: QYTVRTFQSPCKRSRELQGFLGR*GGVRKH
Trigger: GTGTTTCCTTACGCCGCCCCACCTCCCCAAGAACCC...CTGCAGCTCACGAGACCTTTTGCAGGGACTCTGGAATGTCCTCACGGTATATTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
CDS-3UTR CCA 90 bp CGCTACGTCCGTGCAGTATGGCTCTCCCTTTCCACAGGAGCGATCCTCCAGCCCAGCAGTACATGGCAATaGCCAAAATACTCGTCTCCT +
Preference number: 4 (lower is better)
Translates to: RYVRAVWLSLSTGAILQPSSTWQ*PKYSSP
Trigger: AGGAGACGAGTATTTTGGCCATTGCCATGTACTGCT...GGGCTGGAGGATCGCTCCTGTGGAAAGGGAGAGCCATACTGCACGGACGTAGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
CDS-3UTR CCA 90 bp TGGTTGCTACCATTTCTTGTCCTTGAGAAAGGTGCTCCTAGTGCTTGTAGAGGGAAGTGGAGGAACTGCTaGGGACGGGGTGAGGGGCCC +
Preference number: 4 (lower is better)
Translates to: WLLPFLVLEKGAPSACRGKWRNC*GRGEGP
Trigger: GGGCCCCTCACCCCGTCCCCAGCAGTTCCTCCACTT...CCCTCTACAAGCACTAGGAGCACCTTTCTCAAGGACAAGAAATGGTAGCAACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
CDS-3UTR CCA 90 bp CCATTTCTTGTCCTTGAGAAAGGTGCTCCTAGTGCTTGTAGAGGGAAACGCTACAAGTGGAGGAACTGCTaGGGACGGGGTGAGGGGCCC +
Preference number: 4 (lower is better)
Translates to: PFLVLEKGAPSACRGKRYKWRNC*GRGEGP
Trigger: GGGCCCCTCACCCCGTCCCCAGCAGTTCCTCCACTT...GTAGCGTTTCCCTCTACAAGCACTAGGAGCACCTTTCTCAAGGACAAGAAATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
CDS-3UTR CCA 90 bp CAATATACCGTGAGGACATTCCAGAGTCCCTGCAAAAGGTCTCGTGAGCTGCAGGTCTGGAGACTCCGCTaGCAGCCCCTCTCCTTCTTC +
Preference number: 4 (lower is better)
Translates to: QYTVRTFQSPCKRSRELQVWRLR*QPLSFF
Trigger: GAAGAAGGAGAGGGGCTGCCAGCGGAGTCTCCAGAC...CTGCAGCTCACGAGACCTTTTGCAGGGACTCTGGAATGTCCTCACGGTATATTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
CDS-3UTR CCA 90 bp TGTCCCCACTGTAGTGTGACCACAAGTGTACTCCAGGGAGAGGGGTACACAGATAGCAAAGTTGCTGTCTaGAGACTCCGCTGGCAGCCC +
Preference number: 4 (lower is better)
Translates to: CPHCSVTTSVLQGEGYTDSKVAV*RLRWQP
Trigger: GGGCTGCCAGCGGAGTCTCCAGACAGCAACTTTGCT...ATCTGTGTACCCCTCTCCCTGGAGTACACTTGTGGTCACACTACAGTGGGGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
CDS-3UTR CCA 90 bp CCATTTCTTGTCCTTGAGAAAGGTGCTCCTAGTGCTTGTAGAGGGAAACGCTACGACAAGCGCCGGCGCTaGGCATTCCGACTGACGGCA +
Preference number: 4 (lower is better)
Translates to: PFLVLEKGAPSACRGKRYDKRRR*AFRLTA
Trigger: TGCCGTCAGTCGGAATGCCCAGCGCCGGCGCTTGTC...GTAGCGTTTCCCTCTACAAGCACTAGGAGCACCTTTCTCAAGGACAAGAAATGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
CDS-3UTR CCA 90 bp CATTTCTTGTCCTTGAGAAAGGTGCTCCTAGTGCTTGTAGAGGGAAACGCTACGGACAAGCGCCGGCGCTaGGCATTCCGACTGACGGCA +
Preference number: 4 (lower is better)
Translates to: HFLSLRKVLLVLVEGNATDKRRR*AFRLTA
Trigger: TGCCGTCAGTCGGAATGCCCAGCGCCGGCGCTTGTC...CGTAGCGTTTCCCTCTACAAGCACTAGGAGCACCTTTCTCAAGGACAAGAAATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
CDS-3UTR CCA 90 bp AGAAAGGTGCTCCTAGTGCTTGTAGAGGGAAACGCTACGTCCGTGCAGTATGGCAGCCGGCTTAGAGTGTaGTGGTCTGTGCCCAGGAGA +
Preference number: 4 (lower is better)
Translates to: RKVLLVLVEGNATSVQYGSRLRV*WSVPRR
Trigger: TCTCCTGGGCACAGACCACCACACTCTAAGCCGGCT...GCCATACTGCACGGACGTAGCGTTTCCCTCTACAAGCACTAGGAGCACCTTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
CDS-3UTR TCA 90 bp TATGATGTGCCAGAGACCAGGAAATGCCAGAGGGATGTTTGTAACAAAGCTGCCCTCATGGCTCGGATCTaGAGCAGTGCCCGGAAGGGC +
Preference number: 4 (lower is better)
Translates to: YDVPETRKCQRDVCNKAALMARI*SSARKG
Trigger: GCCCTTCCGGGCACTGCTTCAGATCCGAGCCATGAG...GGCAGCTTTGTTACAAACATCCCTCTGGCATTTCCTGGTCTCTGGCACATCATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
CDS-3UTR TCA 90 bp GTCCTTGAGAAAGGTGCTCCTAGTGCTTGTAGAGGGAAACGCTACGTCCGTGCAGGAGGAAATAGTGGATaGCAGAGGCGTCCCTGTGCA +
Preference number: 4 (lower is better)
Translates to: VLEKGAPSACRGKRYVRAGGNSG*QRRPCA
Trigger: TGCACAGGGACGCCTCTGTCATCCACTATTTCCTCC...TGCACGGACGTAGCGTTTCCCTCTACAAGCACTAGGAGCACCTTTCTCAAGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
CDS-3UTR TCA 90 bp CGATCCTCCAGCCCTACCCCAAACTGCAGGTTTCCAATTGGTTATGATGTGCCATCTCCAGCATCTTGCTaGGGATGCCCAGTAGGCAGC +
Preference number: 4 (lower is better)
Translates to: RSSSPTPNCRFPIGYDVPSPASC*GCPVGS
Trigger: GCTGCCTACTGGGCATCCTCAGCAAGATGCTGGAGA...TGGCACATCATAACCAATTGGAAACCTGCAGTTTGGGGTAGGGCTGGAGGATCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
CDS-3UTR TCA 90 bp AACGAAGGACCCCCTGGGCACCAGGCTCTTTTTGAGGCTGCCTTGGAAACAGCCACATTAGGTGGGGCCTaGAATGGTAAAGTCTACTGC +
Preference number: 4 (lower is better)
Translates to: NEGPPGHQALFEAALETATLGGA*NGKVYC
Trigger: GCAGTAGACTTTACCATTTCAGGCCCCACCTAATGT...GGCTGTTTCCAAGGCAGCCTCAAAAAGAGCCTGGTGCCCAGGGGGTCCTTCGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
CDS-3UTR TCA 90 bp AGCGATCCTCCAGCCCTACCCCAAACTGCAGGTTTCCAATTGGTTATGATGTGCCCTCATCAGGCTGACTaGGGACCAGCTCCTTGGATG +
Preference number: 4 (lower is better)
Translates to: SDPPALPQTAGFQLVMMCPHQAD*GPAPWM
Trigger: CATCCAAGGAGCTGGTCCTCAGTCAGCCTGATGAGG...GCACATCATAACCAATTGGAAACCTGCAGTTTGGGGTAGGGCTGGAGGATCGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
CDS-3UTR TCA 90 bp AGGCTCTCCATCACTTCCTTTGGGGACCTGGGCACCAAACTGAGAATCACTGGTAAAAGGGTTGGCCACTaGCCTGTCCTCATCAGGCTG +
Preference number: 4 (lower is better)
Translates to: RLSITSFGDLGTKLRITGKRVGH*PVLIRL
Trigger: CAGCCTGATGAGGACAGGTCAGTGGCCAACCCTTTT...ACCAGTGATTCTCAGTTTGGTGCCCAGGTCCCCAAAGGAAGTGATGGAGAGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
CDS-3UTR TCA 90 bp GAGGGAAACGCTACGTCCGTGCAGTATGGCTCTCCCTTTCCACAGGAGCGATCCCTTTGGGTGAACTGTTaGCGTGACTATGTGACTGTC +
Preference number: 4 (lower is better)
Translates to: EGNATSVQYGSPFPQERSLWVNC*RDYVTV
Trigger: GACAGTCACATAGTCACGTCAACAGTTCACCCAAAG...GGATCGCTCCTGTGGAAAGGGAGAGCCATACTGCACGGACGTAGCGTTTCCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
CDS-3UTR TCA 90 bp AACTGCAGGTTTCCAATTGGTTATGATGTGCCAGAGACCAGGAAATGCCAGAGGACCCCAACTCCCAGGTaGGGTGGGCAGGACCCTAAC +
Preference number: 4 (lower is better)
Translates to: NCRFPIGYDVPETRKCQRTPTPR*GGQDPN
Trigger: GTTAGGGTCCTGCCCACCTCACCTGGGAGTTGGGGT...CCTCTGGCATTTCCTGGTCTCTGGCACATCATAACCAATTGGAAACCTGCAGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
CDS-3UTR GCA 90 bp GTCCTTGAGAAAGGTGCTCCTAGTGCTTGTAGAGGGAAACGCTACGTCCGTGCAACTCCTCGCTTGTACTaGACAGTCTCCGACTGGAGG +
Preference number: 4 (lower is better)
Translates to: VLEKGAPSACRGKRYVRATPRLY*TVSDWR
Trigger: CCTCCAGTCGGAGACTGTGCAGTACAAGCGAGGAGT...TGCACGGACGTAGCGTTTCCCTCTACAAGCACTAGGAGCACCTTTCTCAAGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
CDS-3UTR GCA 90 bp CATTCCAGAGTCCCTGCAAAAGGTCTCGTGAGCTGCAGTTCATTGAGTGGCTTTTCGGATCTGAAGCAGTaGCCGGAAGGGCAGTCGGCA +
Preference number: 4 (lower is better)
Translates to: HSRVPAKGLVSCSSLSGFSDLKQ*PEGQSA
Trigger: TGCCGACTGCCCTTCCGGGCACTGCTTCAGATCCGA...AAAGCCACTCAATGAACTGCAGCTCACGAGACCTTTTGCAGGGACTCTGGAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
CDS-3UTR GCA 90 bp CCATTTCTTGTCCTTGAGAAAGGTGCTCCTAGTGCTTGTAGAGGGAAACGCTACGTGAAGTGGAGGAACTaGTGGGGACGGGGTGAGGGG +
Preference number: 4 (lower is better)
Translates to: PFLVLEKGAPSACRGKRYVKWRN*WGRGEG
Trigger: CCCCTCACCCCGTCCCCAGCAGTTCCTCCACTTCAC...GTAGCGTTTCCCTCTACAAGCACTAGGAGCACCTTTCTCAAGGACAAGAAATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
CDS-3UTR GCA 90 bp GATGACAAGCGCCGGCGCTGGGCATTCCGACTGACGGCATTGTCATCAGCCTGCCAGTGCTTTCACGCTTaGGATGTCAAAGTCATTGTT +
Preference number: 4 (lower is better)
Translates to: DDKRRRWAFRLTALSSACQCFHA*DVKVIV
Trigger: AACAATGACTTTGACATCGCAAGCGTGAAAGCACTG...GCAGGCTGATGACAATGCCGTCAGTCGGAATGCCCAGCGCCGGCGCTTGTCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591355.1
CDS-3UTR GCA 90 bp AACGAAGGACCCCCTGGGCACCAGGCTCTTTTTGAGGCTGCCTTGGAAACAGCCCAGCTTATTGTCCAGTaGTTTCACGCTTGCGATGTC +
Preference number: 4 (lower is better)
Translates to: NEGPPGHQALFEAALETAQLIVQ*FHACDV
Trigger: GACATCGCAAGCGTGAAAGCACTGGACAATAAGCTG...GGCTGTTTCCAAGGCAGCCTCAAAAAGAGCCTGGTGCCCAGGGGGTCCTTCGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
CDS-3UTR GCA 90 bp GGTGCTCCTAGTGCTTGTAGAGGGAAACGCTACGTCCGTGCAGTATGGCTCTCCACATTCCAGAGTCCCTaGAAAAGGTCTCGTGAGCTG +
Preference number: 4 (lower is better)
Translates to: GAPSACRGKRYVRAVWLSTFQSP*KRSREL
Trigger: CAGCTCACGAGACCTTTTGCAGGGACTCTGGAATGT...GGAGAGCCATACTGCACGGACGTAGCGTTTCCCTCTACAAGCACTAGGAGCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
CDS-3UTR GCA 90 bp AGGCTCTCCATCACTTCCTTTGGGGACCTGGGCACCAAACTGAGAATCACTGGTGGGACTACAGGCGCCTaGAACCATGCCCAGCTAATT +
Preference number: 4 (lower is better)
Translates to: RLSITSFGDLGTKLRITGGTTGA*NHAQLI
Trigger: AATTAGCTGGGCATGGTTGCAGGCGCCTGTAGTCCC...ACCAGTGATTCTCAGTTTGGTGCCCAGGTCCCCAAAGGAAGTGATGGAGAGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
CDS-3UTR GCA 90 bp AGGCTCTCCATCACTTCCTTTGGGGACCTGGGCACCAAACTGAGAATCACTGGTCTGCTGCTGGCCACATaGTGCTGCCTGAACTTAGCT +
Preference number: 4 (lower is better)
Translates to: RLSITSFGDLGTKLRITGLLLAT*CCLNLA
Trigger: AGCTAAGTTCAGGCAGCAGCATGTGGCCAGCAGCAG...ACCAGTGATTCTCAGTTTGGTGCCCAGGTCCCCAAAGGAAGTGATGGAGAGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
CDS-3UTR GCA 90 bp CCTGAACATCAATATACCGTGAGGACATTCCAGAGTCCCTGCAAAAGGTCTCGTCTCCCAGCACACTGCTaGTGGCCACATGCTGCTGCC +
Preference number: 4 (lower is better)
Translates to: PEHQYTVRTFQSPCKRSRLPAHC*WPHAAA
Trigger: GGCAGCAGCATGTGGCCAGCAGCAGTGTGCTGGGAG...ACGAGACCTTTTGCAGGGACTCTGGAATGTCCTCACGGTATATTGATGTTCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
CDS-3UTR CCA 90 bp GAAATTAGCCCATGGACCCCAGCTCCACCTGAACATCAATATACCGTGAGGACAGGGTTCTTGGGGAGGTaGGGCGGCGTAAGGAAACAC +
Preference number: 4 (lower is better)
Translates to: EISPWTPAPPEHQYTVRTGFLGR*GGVRKH
Trigger: GTGTTTCCTTACGCCGCCCCACCTCCCCAAGAACCC...TGTCCTCACGGTATATTGATGTTCAGGTGGAGCTGGGGTCCATGGGCTAATTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
CDS-3UTR CCA 90 bp TATGATGTGCCAGAGACCAGGAAATGCCAGAGGGATGTTTGTAACAAAGCTGCCGAGGGATCCACGGTGTaGGAGGGCAGGCAGAACTGC +
Preference number: 4 (lower is better)
Translates to: YDVPETRKCQRDVCNKAAEGSTV*EGRQNC
Trigger: GCAGTTCTGCCTGCCCTCCCACACCGTGGATCCCTC...GGCAGCTTTGTTACAAACATCCCTCTGGCATTTCCTGGTCTCTGGCACATCATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
CDS-3UTR CCA 90 bp CTCTGCAGCCACACAGAAACGAAGGACCCCCTGGGCACCAGGCTCTTTTTGAGGGTACCCAGCAGTACATaGCAATGGCCAAAATACTCG +
Preference number: 4 (lower is better)
Translates to: LCSHTETKDPLGTRLFLRVPSST*QWPKYS
Trigger: CGAGTATTTTGGCCATTGCCATGTACTGCTGGGTAC...CCTCAAAAAGAGCCTGGTGCCCAGGGGGTCCTTCGTTTCTGTGTGGCTGCAGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
CDS-3UTR CCA 90 bp CGATCCTCCAGCCCTACCCCAAACTGCAGGTTTCCAATTGGTTATGATGTGCCATCCAAGCACGTGAAGTaGAGGAACTGCTGGGGACGG +
Preference number: 4 (lower is better)
Translates to: RSSSPTPNCRFPIGYDVPSKHVK*RNCWGR
Trigger: CCGTCCCCAGCAGTTCCTCCACTTCACGTGCTTGGA...TGGCACATCATAACCAATTGGAAACCTGCAGTTTGGGGTAGGGCTGGAGGATCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
CDS-3UTR CCA 90 bp GGTGCTCCTAGTGCTTGTAGAGGGAAACGCTACGTCCGTGCAGTATGGCTCTCCCCTGTGCAAGACGACTaGTCAATAGCTCCAGATGAC +
Preference number: 4 (lower is better)
Translates to: GAPSACRGKRYVRAVWLSPVQDD*SIAPDD
Trigger: GTCATCTGGAGCTATTGACCAGTCGTCTTGCACAGG...GGAGAGCCATACTGCACGGACGTAGCGTTTCCCTCTACAAGCACTAGGAGCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
CDS-3UTR CCA 90 bp TGTCCCCACTGTAGTGTGACCACAAGTGTACTCCAGGGAGAGGGGTACACAGATATGGACATGACAGACTaGGCCAAGCTGCTGCTGGCA +
Preference number: 4 (lower is better)
Translates to: CPHCSVTTSVLQGEGYTDMDMTD*AKLLLA
Trigger: TGCCAGCAGCAGCTTGGCCCAGTCTGTCATGTCCAT...ATCTGTGTACCCCTCTCCCTGGAGTACACTTGTGGTCACACTACAGTGGGGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
CDS-3UTR CCA 90 bp GTCCTTGAGAAAGGTGCTCCTAGTGCTTGTAGAGGGAAACGCTACGTCCGTGCATCTGGCCTTCCTGCGTaGGTGATCCATCCTCTTCCT +
Preference number: 4 (lower is better)
Translates to: VLEKGAPSACRGKRYVRASGLPA*VIHPLP
Trigger: AGGAAGAGGATGGATCACCCACGCAGGAAGGCCAGA...TGCACGGACGTAGCGTTTCCCTCTACAAGCACTAGGAGCACCTTTCTCAAGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000319945.10
CDS-3UTR CCA 90 bp TGGTTGCTACCATTTCTTGTCCTTGAGAAAGGTGCTCCTAGTGCTTGTAGAGGGGGACAGGACAGGAGGTaGTCTGTGTGCCACCACCCC +
Preference number: 4 (lower is better)
Translates to: WLLPFLVLEKGAPSACRGGQDRR*SVCHHP
Trigger: GGGGTGGTGGCACACAGACCACCTCCTGTCCTGTCC...CCCTCTACAAGCACTAGGAGCACCTTTCTCAAGGACAAGAAATGGTAGCAACCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
CDS-3UTR CCA 90 bp AGGCTCTCCATCACTTCCTTTGGGGACCTGGGCACCAAACTGAGAATCACTGGTTCAGGAAGGGGGTCCTaGCCACTGTGGCTACTGTTT +
Preference number: 4 (lower is better)
Translates to: RLSITSFGDLGTKLRITGSGRGS*PLWLLF
Trigger: AAACAGTAGCCACAGTGGCCAGGACCCCCTTCCTGA...ACCAGTGATTCTCAGTTTGGTGCCCAGGTCCCCAAAGGAAGTGATGGAGAGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
CDS-3UTR CCA 90 bp CAATATACCGTGAGGACATTCCAGAGTCCCTGCAAAAGGTCTCGTGAGCTGCAGCGGCTTAGAGTGTGGTaGTCTGTGCCCAGGAGATGC +
Preference number: 4 (lower is better)
Translates to: QYTVRTFQSPCKRSRELQRLRVW*SVPRRC
Trigger: GCATCTCCTGGGCACAGACCACCACACTCTAAGCCG...CTGCAGCTCACGAGACCTTTTGCAGGGACTCTGGAATGTCCTCACGGTATATTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
CDS-3UTR CCA 90 bp AGCGATCCTCCAGCCCTACCCCAAACTGCAGGTTTCCAATTGGTTATGATGTGCAGCCGGCTTAGAGTGTaGTGGTCTGTGCCCAGGAGA +
Preference number: 4 (lower is better)
Translates to: SDPPALPQTAGFQLVMMCSRLRV*WSVPRR
Trigger: TCTCCTGGGCACAGACCACCACACTCTAAGCCGGCT...GCACATCATAACCAATTGGAAACCTGCAGTTTGGGGTAGGGCTGGAGGATCGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
CDS-3UTR TCA 90 bp CTGGCCTCTGCAGCCACACAGAAACGAAGGACCCCCTGGGCACCAGGCTCTTTTCATCTGTGTCAAAGGTaGACTCAACATTGTAGTGGA +
Preference number: 4 (lower is better)
Translates to: LASAATQKRRTPWAPGSFHLCQR*TQHCSG
Trigger: TCCACTACAATGTTGAGTTCACCTTTGACACAGATG...AAAAGAGCCTGGTGCCCAGGGGGTCCTTCGTTTCTGTGTGGCTGCAGAGGCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
CDS-3UTR TCA 90 bp AGAAAGGTGCTCCTAGTGCTTGTAGAGGGAAACGCTACGTCCGTGCAGTATGGCCCTGGTAATAGATGGTaGTGGCTACCCGAGCATCTG +
Preference number: 4 (lower is better)
Translates to: RKVLLVLVEGNATSVQYGPGNRW*WLPEHL
Trigger: CAGATGCTCGGGTAGCCATCACCATCTATTACCAGG...GCCATACTGCACGGACGTAGCGTTTCCCTCTACAAGCACTAGGAGCACCTTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
CDS-3UTR TCA 90 bp TGTCCCCACTGTAGTGTGACCACAAGTGTACTCCAGGGAGAGGGGTACACAGATCCTGAAGGAGGTAGCTaGCCCCGTCTACTACTTGTT +
Preference number: 4 (lower is better)
Translates to: CPHCSVTTSVLQGEGYTDPEGGS*PRLLLV
Trigger: AACAAGTAGTAGACGGGGTCAGCTACCTCCTTCAGG...ATCTGTGTACCCCTCTCCCTGGAGTACACTTGTGGTCACACTACAGTGGGGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
CDS-3UTR TCA 90 bp AGAAAGGTGCTCCTAGTGCTTGTAGAGGGAAACGCTACGTCCGTGCAGTATGGCTTGAGTTTGAGTCCCTaGCTGCTGCTGTCAGACAGG +
Preference number: 4 (lower is better)
Translates to: RKVLLVLVEGNATSVQYGLSLSP*LLLSDR
Trigger: CCTGTCTGACAGCAGCAGTCAGGGACTCAAACTCAA...GCCATACTGCACGGACGTAGCGTTTCCCTCTACAAGCACTAGGAGCACCTTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
CDS-3UTR TCA 90 bp GTGCCAGAGACCAGGAAATGCCAGAGGGATGTTTGTAACAAAGCTGCCAAACTCAGGATGCCATGGACATaGCAGACTGGGCCAAGCTGC +
Preference number: 4 (lower is better)
Translates to: VPETRKCQRDVCNKAAKLRMPWT*QTGPSC
Trigger: GCAGCTTGGCCCAGTCTGTCATGTCCATGGCATCCT...GAGTTTGGCAGCTTTGTTACAAACATCCCTCTGGCATTTCCTGGTCTCTGGCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
CDS-3UTR TCA 90 bp CGATCCTCCAGCCCTACCCCAAACTGCAGGTTTCCAATTGGTTATGATGTGCCAGCCTTCCTGCGTGGGTaGTCCATCCTCTTCCTCTAT +
Preference number: 4 (lower is better)
Translates to: RSSSPTPNCRFPIGYDVPAFLRG*SILFLY
Trigger: ATAGAGGAAGAGGATGGATCACCCACGCAGGAAGGC...TGGCACATCATAACCAATTGGAAACCTGCAGTTTGGGGTAGGGCTGGAGGATCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000319945.10
CDS-3UTR TCA 90 bp ACTCCTCACCCAGTGCTTGGCACACAGAGGTGGTCAACACATGTGTTTCTTGAAGCTGGGCATTCCGACTaGCGGCATTGTCATCAGCCT +
Preference number: 4 (lower is better)
Translates to: TPHPVLGTQRWSTHVFLEAGHSD*RHCHQP
Trigger: AGGCTGATGACAATGCCGTCAGTCGGAATGCCCAGC...TTCAAGAAACACATGTGTTGACCACCTCTGTGTGCCAAGCACTGGGTGAGGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
CDS-3UTR TCA 90 bp GTGCCAGAGACCAGGAAATGCCAGAGGGATGTTTGTAACAAAGCTGCCAAACTCGCTGGGCATTCCGACTaGCGGCATTGTCATCAGCCT +
Preference number: 4 (lower is better)
Translates to: VPETRKCQRDVCNKAAKLAGHSD*RHCHQP
Trigger: AGGCTGATGACAATGCCGTCAGTCGGAATGCCCAGC...GAGTTTGGCAGCTTTGTTACAAACATCCCTCTGGCATTTCCTGGTCTCTGGCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
CDS-3UTR TCA 90 bp GAAATTAGCCCATGGACCCCAGCTCCACCTGAACATCAATATACCGTGAGGACATCTCCAGCATCTTGCTaGGGATGCCCAGTAGGCAGC +
Preference number: 4 (lower is better)
Translates to: EISPWTPAPPEHQYTVRTSPASC*GCPVGS
Trigger: GCTGCCTACTGGGCATCCTCAGCAAGATGCTGGAGA...TGTCCTCACGGTATATTGATGTTCAGGTGGAGCTGGGGTCCATGGGCTAATTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
CDS-3UTR TCA 90 bp CCTGAACATCAATATACCGTGAGGACATTCCAGAGTCCCTGCAAAAGGTCTCGTGAAGGCCCTGAGCCCTaGTTCCAACCTCTGCTCCCA +
Preference number: 4 (lower is better)
Translates to: PEHQYTVRTFQSPCKRSREGPEP*FQPLLP
Trigger: TGGGAGCAGAGGTTGGAATCAGGGCTCAGGGCCTTC...ACGAGACCTTTTGCAGGGACTCTGGAATGTCCTCACGGTATATTGATGTTCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
CDS-3UTR TCA 90 bp AACTGCAGGTTTCCAATTGGTTATGATGTGCCAGAGACCAGGAAATGCCAGAGGGAAGGCCCTGAGCCCTaGTTCCAACCTCTGCTCCCA +
Preference number: 4 (lower is better)
Translates to: NCRFPIGYDVPETRKCQREGPEP*FQPLLP
Trigger: TGGGAGCAGAGGTTGGAATCAGGGCTCAGGGCCTTC...CCTCTGGCATTTCCTGGTCTCTGGCACATCATAACCAATTGGAAACCTGCAGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
CDS-3UTR TCA 90 bp AGCGATCCTCCAGCCCTACCCCAAACTGCAGGTTTCCAATTGGTTATGATGTGCGCACCAGGCTCTTTTTaGGGCTGCCTTGGAAACAGC +
Preference number: 4 (lower is better)
Translates to: SDPPALPQTAGFQLVMMCAPGSF*GCLGNS
Trigger: GCTGTTTCCAAGGCAGCCTCAAAAAGAGCCTGGTGC...GCACATCATAACCAATTGGAAACCTGCAGTTTGGGGTAGGGCTGGAGGATCGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
CDS-3UTR TCA 90 bp CGATCCTCCAGCCCTACCCCAAACTGCAGGTTTCCAATTGGTTATGATGTGCCAGTGACTGTCTCCAGATaGAGGACTGGGGCAAAAGGG +
Preference number: 4 (lower is better)
Translates to: RSSSPTPNCRFPIGYDVPVTVSR*RTGAKG
Trigger: CCCTTTTGCCCCAGTCCTTCATCTGGAGACAGTCAC...TGGCACATCATAACCAATTGGAAACCTGCAGTTTGGGGTAGGGCTGGAGGATCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
CDS-3UTR TCA 90 bp CTTGAAGTGAAGGCCCTGAGCCCTGATTCCAACCTCTGCTCCCAGCACACTGCTCCTCTTCTCTTTGGGTaGACTGTTGACGTGACTATG +
Preference number: 4 (lower is better)
Translates to: LEVKALSPDSNLCSQHTAPLLFG*TVDVTM
Trigger: CATAGTCACGTCAACAGTTCACCCAAAGAGAAGAGG...AGCAGTGTGCTGGGAGCAGAGGTTGGAATCAGGGCTCAGGGCCTTCACTTCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
CDS-3UTR TCA 90 bp CTCAAGGCTCTCCATCACTTCCTTTGGGGACCTGGGCACCAAACTGAGAATCACCAGACCAAAGCAAAGTaGGCGACCAGCGTGCTAAAC +
Preference number: 4 (lower is better)
Translates to: LKALHHFLWGPGHQTENHQTKAK*ATSVLN
Trigger: GTTTAGCACGCTGGTCGCTCACTTTGCTTTGGTCTG...GTGATTCTCAGTTTGGTGCCCAGGTCCCCAAAGGAAGTGATGGAGAGCCTTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
CDS-3UTR TCA 90 bp AGGCTCTCCATCACTTCCTTTGGGGACCTGGGCACCAAACTGAGAATCACTGGTCAGACCAAAGCAAAGTaGGCGACCAGCGTGCTAAAC +
Preference number: 4 (lower is better)
Translates to: RLSITSFGDLGTKLRITGQTKAK*ATSVLN
Trigger: GTTTAGCACGCTGGTCGCTCACTTTGCTTTGGTCTG...ACCAGTGATTCTCAGTTTGGTGCCCAGGTCCCCAAAGGAAGTGATGGAGAGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
CDS-3UTR TCA 90 bp GCCATGTCAGTGTCTAAGTTGGCCCTGCCCCATTTACTTTTAGGAGCACACTCTCCTGTCTCAGCCTCCTaGGTAGCTGCGATTACAGGG +
Preference number: 4 (lower is better)
Translates to: AMSVSKLALPHLLLGAHSPVSAS*VAAITG
Trigger: CCCTGTAATCGCAGCTACTCAGGAGGCTGAGACAGG...AGAGTGTGCTCCTAAAAGTAAATGGGGCAGGGCCAACTTAGACACTGACATGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591615.1
CDS-3UTR TCA 90 bp GTCCTTGAGAAAGGTGCTCCTAGTGCTTGTAGAGGGAAACGCTACGTCCGTGCAACCTTCCTGCGTGGGTaGTCCATCCTCTTCCTCTAT +
Preference number: 4 (lower is better)
Translates to: VLEKGAPSACRGKRYVRATFLRG*SILFLY
Trigger: ATAGAGGAAGAGGATGGATCACCCACGCAGGAAGGT...TGCACGGACGTAGCGTTTCCCTCTACAAGCACTAGGAGCACCTTTCTCAAGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647930.1
CDS-3UTR GCA 90 bp TTCTTGAAATGTCACCTTAGGATGGAGTTGCAGGCCTCCCTGAATGCACCTGATTCGGATCTGAAGCAGTaGCCGGAAGGGCAGTCGGCA +
Preference number: 4 (lower is better)
Translates to: FLKCHLRMELQASLNAPDSDLKQ*PEGQSA
Trigger: TGCCGACTGCCCTTCCGGGCACTGCTTCAGATCCGA...ATCAGGTGCATTCAGGGAGGCCTGCAACTCCATCCTAAGGTGACATTTCAAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
CDS-3UTR GCA 90 bp AGAAAGGTGCTCCTAGTGCTTGTAGAGGGAAACGCTACGTCCGTGCAGTATGGCGCAGGTGGCCATCACTaGCATATGAAGGGAGCATTC +
Preference number: 4 (lower is better)
Translates to: RKVLLVLVEGNATSVQYGAGGHH*HMKGAF
Trigger: GAATGCTCCCTTCATATGGCAGTGATGGCCACCTGC...GCCATACTGCACGGACGTAGCGTTTCCCTCTACAAGCACTAGGAGCACCTTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
CDS-3UTR GCA 90 bp ACCCCAAACTGCAGGTTTCCAATTGGTTATGATGTGCCAGAGACCAGGAAATGCCTCCCTCCTCTTCAGTaGCAGGGGCGATGTAGGAGC +
Preference number: 4 (lower is better)
Translates to: TPNCRFPIGYDVPETRKCLPPLQ*QGRCRS
Trigger: GCTCCTACATCGCCCCTGGCACTGAAGAGGAGGGAG...GCATTTCCTGGTCTCTGGCACATCATAACCAATTGGAAACCTGCAGTTTGGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
CDS-3UTR GCA 90 bp CTCTGCAGCCACACAGAAACGAAGGACCCCCTGGGCACCAGGCTCTTTTTGAGGAGCCCTACCCCAAACTaGAGGTTTCCAATTGGTTAT +
Preference number: 4 (lower is better)
Translates to: LCSHTETKDPLGTRLFLRSPTPN*RFPIGY
Trigger: ATAACCAATTGGAAACCTGCAGTTTGGGGTAGGGCT...CCTCAAAAAGAGCCTGGTGCCCAGGGGGTCCTTCGTTTCTGTGTGGCTGCAGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
CDS-3UTR GCA 90 bp CAATATACCGTGAGGACATTCCAGAGTCCCTGCAAAAGGTCTCGTGAGCTGCAGGGGACTACAGGCGCCTaGAACCATGCCCAGCTAATT +
Preference number: 4 (lower is better)
Translates to: QYTVRTFQSPCKRSRELQGTTGA*NHAQLI
Trigger: AATTAGCTGGGCATGGTTGCAGGCGCCTGTAGTCCC...CTGCAGCTCACGAGACCTTTTGCAGGGACTCTGGAATGTCCTCACGGTATATTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
CDS-3UTR GCA 90 bp CAATATACCGTGAGGACATTCCAGAGTCCCTGCAAAAGGTCTCGTGAGCTGCAGTTCAGGCCATTCTCCTaGCTCAGCCTCCCAAGTAGC +
Preference number: 4 (lower is better)
Translates to: QYTVRTFQSPCKRSRELQFRPFS*LSLPSS
Trigger: GCTACTTGGGAGGCTGAGGCAGGAGAATGGCCTGAA...CTGCAGCTCACGAGACCTTTTGCAGGGACTCTGGAATGTCCTCACGGTATATTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
CDS-3UTR GCA 90 bp CGATCCTCCAGCCCTACCCCAAACTGCAGGTTTCCAATTGGTTATGATGTGCCACTGCTGCTGGCCACATaGTGCTGCCTGAACTTAGCT +
Preference number: 4 (lower is better)
Translates to: RSSSPTPNCRFPIGYDVPLLLAT*CCLNLA
Trigger: AGCTAAGTTCAGGCAGCAGCATGTGGCCAGCAGCAG...TGGCACATCATAACCAATTGGAAACCTGCAGTTTGGGGTAGGGCTGGAGGATCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
CDS-3UTR GCA 90 bp AGAAAGGTGCTCCTAGTGCTTGTAGAGGGAAACGCTACGTCCGTGCAGTATGGCACTGTGAATACTACCTaGAGGGGACAGGACAGGAGG +
Preference number: 4 (lower is better)
Translates to: RKVLLVLVEGNATSVQYGTVNTT*RGQDRR
Trigger: CCTCCTGTCCTGTCCCCTGCAGGTAGTATTCACAGT...GCCATACTGCACGGACGTAGCGTTTCCCTCTACAAGCACTAGGAGCACCTTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
CDS-3UTR GCA 90 bp CCAATCCCACTCCCATTAACCTGGGCCATGTCAGTGTCTAAGTTGGCCCTGCCCAGGAAGGCTTTTCTTTaGATCTCGAGGAAGCCCAAC +
Preference number: 4 (lower is better)
Translates to: PIPLPLTWAMSVSKLALPRKAFL*ISRKPN
Trigger: GTTGGGCTTCCTCGAGATGCAAAGAAAAGCCTTCCT...GGGCAGGGCCAACTTAGACACTGACATGGCCCAGGTTAATGGGAGTGGGATTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591615.1
CDS-3UTR CCA 90 bp GTGCCAGAGACCAGGAAATGCCAGAGGGATGTTTGTAACAAAGCTGCCAAACTCAATAGCTTCCGGACTTaGGCGGGTAGCGGTACACGG +
Preference number: 4 (lower is better)
Translates to: VPETRKCQRDVCNKAAKLNSFRT*AGSGTR
Trigger: CCGTGTACCGCTACCCGCCCAAGTCCGGAAGCTATT...GAGTTTGGCAGCTTTGTTACAAACATCCCTCTGGCATTTCCTGGTCTCTGGCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
CDS-3UTR CCA 90 bp CATTTCTTGTCCTTGAGAAAGGTGCTCCTAGTGCTTGTAGAGGGAAACGCTACGGGGTTCTTGGGGAGGTaGGGCGGCGTAAGGAAACAC +
Preference number: 4 (lower is better)
Translates to: HFLSLRKVLLVLVEGNATGFLGR*GGVRKH
Trigger: GTGTTTCCTTACGCCGCCCCACCTCCCCAAGAACCC...CGTAGCGTTTCCCTCTACAAGCACTAGGAGCACCTTTCTCAAGGACAAGAAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
CDS-3UTR CCA 90 bp CTTGAAGTGAAGGCCCTGAGCCCTGATTCCAACCTCTGCTCCCAGCACACTGCTGTACCCAGCAGTACATaGCAATGGCCAAAATACTCG +
Preference number: 4 (lower is better)
Translates to: LEVKALSPDSNLCSQHTAVPSST*QWPKYS
Trigger: CGAGTATTTTGGCCATTGCCATGTACTGCTGGGTAC...AGCAGTGTGCTGGGAGCAGAGGTTGGAATCAGGGCTCAGGGCCTTCACTTCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
CDS-3UTR CCA 90 bp AGAAAGGTGCTCCTAGTGCTTGTAGAGGGAAACGCTACGTCCGTGCAGTATGGCTTACAGAGGCAGAGGTaGCGACAGGGCAGAATCAAG +
Preference number: 4 (lower is better)
Translates to: RKVLLVLVEGNATSVQYGLQRQR*RQGRIK
Trigger: CTTGATTCTGCCCTGTCGCCACCTCTGCCTCTGTAA...GCCATACTGCACGGACGTAGCGTTTCCCTCTACAAGCACTAGGAGCACCTTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
CDS-3UTR CCA 90 bp GTCCTTGAGAAAGGTGCTCCTAGTGCTTGTAGAGGGAAACGCTACGTCCGTGCATTACAGAGGCAGAGGTaGCGACAGGGCAGAATCAAG +
Preference number: 4 (lower is better)
Translates to: VLEKGAPSACRGKRYVRALQRQR*RQGRIK
Trigger: CTTGATTCTGCCCTGTCGCCACCTCTGCCTCTGTAA...TGCACGGACGTAGCGTTTCCCTCTACAAGCACTAGGAGCACCTTTCTCAAGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
CDS-3UTR CCA 90 bp GTCCTTGAGAAAGGTGCTCCTAGTGCTTGTAGAGGGAAACGCTACGTCCGTGCAGGGGTTAAAGCTGGTTaGGGACAAGGGGCCCAATTT +
Preference number: 4 (lower is better)
Translates to: VLEKGAPSACRGKRYVRAGVKAG*GQGAQF
Trigger: AAATTGGGCCCCTTGTCCCCAACCAGCTTTAACCCC...TGCACGGACGTAGCGTTTCCCTCTACAAGCACTAGGAGCACCTTTCTCAAGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
CDS-3UTR CCA 90 bp TTTGGGGACCTGGGCACCAAACTGAGAATCACTGGTCCACATTTCTCTCAACCATCCAAGCACGTGAAGTaGAGGAACTGCTGGGGACGG +
Preference number: 4 (lower is better)
Translates to: FGDLGTKLRITGPHFSQPSKHVK*RNCWGR
Trigger: CCGTCCCCAGCAGTTCCTCCACTTCACGTGCTTGGA...TGGTTGAGAGAAATGTGGACCAGTGATTCTCAGTTTGGTGCCCAGGTCCCCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
CDS-3UTR CCA 90 bp AGAAAGGTGCTCCTAGTGCTTGTAGAGGGAAACGCTACGTCCGTGCAGTATGGCGTGTCAGTGCTGATCTaGGAGGATGCCATGGACATG +
Preference number: 4 (lower is better)
Translates to: RKVLLVLVEGNATSVQYGVSVLI*EDAMDM
Trigger: CATGTCCATGGCATCCTCCCAGATCAGCACTGACAC...GCCATACTGCACGGACGTAGCGTTTCCCTCTACAAGCACTAGGAGCACCTTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
CDS-3UTR CCA 90 bp CTCTGCAGCCACACAGAAACGAAGGACCCCCTGGGCACCAGGCTCTTTTTGAGGCTTGGCACACAGAGGTaGTCAACACATGTGTTTCTT +
Preference number: 4 (lower is better)
Translates to: LCSHTETKDPLGTRLFLRLGTQR*STHVFL
Trigger: AAGAAACACATGTGTTGACCACCTCTGTGTGCCAAG...CCTCAAAAAGAGCCTGGTGCCCAGGGGGTCCTTCGTTTCTGTGTGGCTGCAGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
CDS-3UTR CCA 90 bp CATTTCTTGTCCTTGAGAAAGGTGCTCCTAGTGCTTGTAGAGGGAAACGCTACGGCAGTGGCACGATCTTaGCTCACCGCAACCTCCACC +
Preference number: 4 (lower is better)
Translates to: HFLSLRKVLLVLVEGNATAVARS*LTATST
Trigger: GGTGGAGGTTGCGGTGAGCCAAGATCGTGCCACTGC...CGTAGCGTTTCCCTCTACAAGCACTAGGAGCACCTTTCTCAAGGACAAGAAATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
CDS-3UTR CCA 90 bp CGATCCTCCAGCCCTACCCCAAACTGCAGGTTTCCAATTGGTTATGATGTGCCACTGGGGCAAAAGGGTTaGCCACTGACCTGTCCTCAT +
Preference number: 4 (lower is better)
Translates to: RSSSPTPNCRFPIGYDVPLGQKG*PLTCPH
Trigger: ATGAGGACAGGTCAGTGGCCAACCCTTTTGCCCCAG...TGGCACATCATAACCAATTGGAAACCTGCAGTTTGGGGTAGGGCTGGAGGATCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
CDS-3UTR CCA 90 bp CAATATACCGTGAGGACATTCCAGAGTCCCTGCAAAAGGTCTCGTGAGCTGCAGCTGGGGCAAAAGGGTTaGCCACTGACCTGTCCTCAT +
Preference number: 4 (lower is better)
Translates to: QYTVRTFQSPCKRSRELQLGQKG*PLTCPH
Trigger: ATGAGGACAGGTCAGTGGCCAACCCTTTTGCCCCAG...CTGCAGCTCACGAGACCTTTTGCAGGGACTCTGGAATGTCCTCACGGTATATTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
CDS-3UTR CCA 90 bp AGGACCAGCTCCTTGGATGGAGTATTTCTGTGGGCCAGAGAGCTAAATGACAGCCTCCAGATGAAGGACTaGGGCAAAAGGGTTGGCCAC +
Preference number: 4 (lower is better)
Translates to: RTSSLDGVFLWARELNDSLQMKD*GKRVGH
Trigger: GTGGCCAACCCTTTTGCCCCAGTCCTTCATCTGGAG...GCTGTCATTTAGCTCTCTGGCCCACAGAAATACTCCATCCAAGGAGCTGGTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
CDS-3UTR CCA 90 bp GAGGGAAACGCTACGTCCGTGCAGTATGGCTCTCCCTTTCCACAGGAGCGATCCAGAGGGGTACACAGATaGCACAAGCAGTATACACAT +
Preference number: 4 (lower is better)
Translates to: EGNATSVQYGSPFPQERSRGVHR*HKQYTH
Trigger: ATGTGTATACTGCTTGTGCCATCTGTGTACCCCTCT...GGATCGCTCCTGTGGAAAGGGAGAGCCATACTGCACGGACGTAGCGTTTCCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
CDS-3UTR TCA 90 bp ATTGTGGTTACAGGTTGTAACAGCTGTCACAGGAGGGTAAAAAGTCTCCAGCATCTCATGGCTCGGATCTaGAGCAGTGCCCGGAAGGGC +
Preference number: 4 (lower is better)
Translates to: IVVTGCNSCHRRVKSLQHLMARI*SSARKG
Trigger: GCCCTTCCGGGCACTGCTTCAGATCCGAGCCATGAG...ATGCTGGAGACTTTTTACCCTCCTGTGACAGCTGTTACAACCTGTAACCACAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
CDS-3UTR TCA 90 bp CCATTTCTTGTCCTTGAGAAAGGTGCTCCTAGTGCTTGTAGAGGGAAACGCTACAGACGGTGTCAGTGCTaGTCTGGGAGGATGCCATGG +
Preference number: 4 (lower is better)
Translates to: PFLVLEKGAPSACRGKRYRRCQC*SGRMPW
Trigger: CCATGGCATCCTCCCAGATCAGCACTGACACCGTCT...GTAGCGTTTCCCTCTACAAGCACTAGGAGCACCTTTCTCAAGGACAAGAAATGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
CDS-3UTR TCA 90 bp CATTTCTTGTCCTTGAGAAAGGTGCTCCTAGTGCTTGTAGAGGGAAACGCTACGGCTGGGCATTCCGACTaGCGGCATTGTCATCAGCCT +
Preference number: 4 (lower is better)
Translates to: HFLSLRKVLLVLVEGNATAGHSD*RHCHQP
Trigger: AGGCTGATGACAATGCCGTCAGTCGGAATGCCCAGC...CGTAGCGTTTCCCTCTACAAGCACTAGGAGCACCTTTCTCAAGGACAAGAAATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
CDS-3UTR TCA 90 bp GTGCCAGAGACCAGGAAATGCCAGAGGGATGTTTGTAACAAAGCTGCCAAACTCGGTTCCAGTTCCCTCTaGGAGGTGAGGGATTGTGGT +
Preference number: 4 (lower is better)
Translates to: VPETRKCQRDVCNKAAKLGSSSL*EVRDCG
Trigger: ACCACAATCCCTCACCTCTCAGAGGGAACTGGAACC...GAGTTTGGCAGCTTTGTTACAAACATCCCTCTGGCATTTCCTGGTCTCTGGCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
CDS-3UTR TCA 90 bp GGTGCTCCTAGTGCTTGTAGAGGGAAACGCTACGTCCGTGCAGTATGGCTCTCCGTTTCCAATTGGTTATaGTGTGCCAGAGACCAGGAA +
Preference number: 4 (lower is better)
Translates to: GAPSACRGKRYVRAVWLSVSNWL*CARDQE
Trigger: TTCCTGGTCTCTGGCACATCATAACCAATTGGAAAC...GGAGAGCCATACTGCACGGACGTAGCGTTTCCCTCTACAAGCACTAGGAGCACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
CDS-3UTR TCA 90 bp GTCCTTGAGAAAGGTGCTCCTAGTGCTTGTAGAGGGAAACGCTACGTCCGTGCAACCTGGGCACCAAACTaGGAATCACTGGTCCACATT +
Preference number: 4 (lower is better)
Translates to: VLEKGAPSACRGKRYVRATWAPN*ESLVHI
Trigger: AATGTGGACCAGTGATTCTCAGTTTGGTGCCCAGGT...TGCACGGACGTAGCGTTTCCCTCTACAAGCACTAGGAGCACCTTTCTCAAGGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
CDS-3UTR TCA 90 bp TTCTTGAAATGTCACCTTAGGATGGAGTTGCAGGCCTCCCTGAATGCACCTGATCATCAGGGCAGGATGTaGGCCACAACCACTAGGCAG +
Preference number: 4 (lower is better)
Translates to: FLKCHLRMELQASLNAPDHQGRM*ATTTRQ
Trigger: CTGCCTAGTGGTTGTGGCTCACATCCTGCCCTGATG...ATCAGGTGCATTCAGGGAGGCCTGCAACTCCATCCTAAGGTGACATTTCAAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
CDS-3UTR TCA 90 bp CGATCCTCCAGCCCTACCCCAAACTGCAGGTTTCCAATTGGTTATGATGTGCCAATGGGACTGAGGCCTTaGGGAATCTTTCCGTGCTTC +
Preference number: 4 (lower is better)
Translates to: RSSSPTPNCRFPIGYDVPMGLRP*GIFPCF
Trigger: GAAGCACGGAAAGATTCCTCAAGGCCTCAGTCCCAT...TGGCACATCATAACCAATTGGAAACCTGCAGTTTGGGGTAGGGCTGGAGGATCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
CDS-3UTR TCA 90 bp CATTTCTTGTCCTTGAGAAAGGTGCTCCTAGTGCTTGTAGAGGGAAACGCTACGCTGTCCTCATCAGGCTaGCTGAGGACCAGCTCCTTG +
Preference number: 4 (lower is better)
Translates to: HFLSLRKVLLVLVEGNATLSSSG*LRTSSL
Trigger: CAAGGAGCTGGTCCTCAGTCAGCCTGATGAGGACAG...CGTAGCGTTTCCCTCTACAAGCACTAGGAGCACCTTTCTCAAGGACAAGAAATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
CDS-3UTR TCA 90 bp TCTTGTTCTTTCATTTCTCAAGTCCTTTGCTCAGATAAAGGCTCCCTCAACACCACACCCTCCGTGAGATaGCCTGCCCCTCACCCACCC +
Preference number: 4 (lower is better)
Translates to: SCSFISQVLCSDKGSLNTTPSVR*PAPHPP
Trigger: GGGTGGGTGAGGGGCAGGTCATCTCACGGAGGGTGT...GGTGTTGAGGGAGCCTTTATCTGAGCAAAGGACTTGAGAAATGAAAGAACAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591615.1
CDS-3UTR TCA 90 bp TTGGCAAGGAAAAAGATGGGAAGGGAAAATATGGATGCAAAGGGCGATAGCAAGGCTCTACACCCTCCGTaGGATGACCTGCCCCTCACC +
Preference number: 4 (lower is better)
Translates to: LARKKMGRENMDAKGDSKALHPP*DDLPLT
Trigger: GGTGAGGGGCAGGTCATCTCACGGAGGGTGTAGAGC...CTTGCTATCGCCCTTTGCATCCATATTTTCCCTTCCCATCTTTTTCCTTGCCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000591615.1
CDS-3UTR GCA 90 bp AGCGATCCTCCAGCCCTACCCCAAACTGCAGGTTTCCAATTGGTTATGATGTGCGCAGGTGGCCATCACTaGCATATGAAGGGAGCATTC +
Preference number: 4 (lower is better)
Translates to: SDPPALPQTAGFQLVMMCAGGHH*HMKGAF
Trigger: GAATGCTCCCTTCATATGGCAGTGATGGCCACCTGC...GCACATCATAACCAATTGGAAACCTGCAGTTTGGGGTAGGGCTGGAGGATCGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
CDS-3UTR GCA 90 bp GGTGCTCCTAGTGCTTGTAGAGGGAAACGCTACGTCCGTGCAGTATGGCTCTCCTCATCTTCCTCTTCATaGAGCACGGAAGAGTTTTGG +
Preference number: 4 (lower is better)
Translates to: GAPSACRGKRYVRAVWLSSSSSS*STEEFW
Trigger: CCAAAACTCTTCCGTGCTGCATGAAGAGGAAGATGA...GGAGAGCCATACTGCACGGACGTAGCGTTTCCCTCTACAAGCACTAGGAGCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
CDS-3UTR GCA 90 bp TATGATGTGCCAGAGACCAGGAAATGCCAGAGGGATGTTTGTAACAAAGCTGCCGTCCTCTGGCCTTCCTaGGTGGGTGATCCATCCTCT +
Preference number: 4 (lower is better)
Translates to: YDVPETRKCQRDVCNKAAVLWPS*VGDPSS
Trigger: AGAGGATGGATCACCCACGCAGGAAGGCCAGAGGAC...GGCAGCTTTGTTACAAACATCCCTCTGGCATTTCCTGGTCTCTGGCACATCATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000319945.10
CDS-3UTR GCA 90 bp CATTCCAGAGTCCCTGCAAAAGGTCTCGTGAGCTGCAGTTCATTGAGTGGCTTTTTCAGGCCATTCTCCTaGCTCAGCCTCCCAAGTAGC +
Preference number: 4 (lower is better)
Translates to: HSRVPAKGLVSCSSLSGFFRPFS*LSLPSS
Trigger: GCTACTTGGGAGGCTGAGGCAGGAGAATGGCCTGAA...AAAGCCACTCAATGAACTGCAGCTCACGAGACCTTTTGCAGGGACTCTGGAATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
CDS-3UTR GCA 90 bp TGGTTGCTACCATTTCTTGTCCTTGAGAAAGGTGCTCCTAGTGCTTGTAGAGGGCCACTCCTCACCCAGTaGTTGGCACACAGAGGTGGT +
Preference number: 4 (lower is better)
Translates to: WLLPFLVLEKGAPSACRGPLLTQ*LAHRGG
Trigger: ACCACCTCTGTGTGCCAAGCACTGGGTGAGGAGTGG...CCCTCTACAAGCACTAGGAGCACCTTTCTCAAGGACAAGAAATGGTAGCAACCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
CDS-3UTR GCA 90 bp AGGACCAGCTCCTTGGATGGAGTATTTCTGTGGGCCAGAGAGCTAAATGACAGCCTGCTGGCCACATGCTaGTGCCTGAACTTAGCTCAA +
Preference number: 4 (lower is better)
Translates to: RTSSLDGVFLWARELNDSLLATC*CLNLAQ
Trigger: TTGAGCTAAGTTCAGGCAGCAGCATGTGGCCAGCAG...GCTGTCATTTAGCTCTCTGGCCCACAGAAATACTCCATCCAAGGAGCTGGTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
CDS-3UTR GCA 90 bp TATGATGTGCCAGAGACCAGGAAATGCCAGAGGGATGTTTGTAACAAAGCTGCCTCTGTGCCCAGGAGATaGCTCAGCGGGGGTAGAAAC +
Preference number: 4 (lower is better)
Translates to: YDVPETRKCQRDVCNKAASVPRR*LSGGRN
Trigger: GTTTCTACCCCCGCTGAGGCATCTCCTGGGCACAGA...GGCAGCTTTGTTACAAACATCCCTCTGGCATTTCCTGGTCTCTGGCACATCATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
CDS-3UTR GCA 90 bp TGGTTGCTACCATTTCTTGTCCTTGAGAAAGGTGCTCCTAGTGCTTGTAGAGGGTCTGTGCCCAGGAGATaGCTCAGCGGGGGTAGAAAC +
Preference number: 4 (lower is better)
Translates to: WLLPFLVLEKGAPSACRGSVPRR*LSGGRN
Trigger: GTTTCTACCCCCGCTGAGGCATCTCCTGGGCACAGA...CCCTCTACAAGCACTAGGAGCACCTTTCTCAAGGACAAGAAATGGTAGCAACCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
CDS-3UTR GCA 90 bp TGTCCCCACTGTAGTGTGACCACAAGTGTACTCCAGGGAGAGGGGTACACAGATTGCACACACCAGGTGTaGAGACCAAAGCAAAGTGAG +
Preference number: 4 (lower is better)
Translates to: CPHCSVTTSVLQGEGYTDCTHQV*RPKQSE
Trigger: CTCACTTTGCTTTGGTCTGCACACCTGGTGTGTGCA...ATCTGTGTACCCCTCTCCCTGGAGTACACTTGTGGTCACACTACAGTGGGGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
CDS-3UTR GCA 90 bp TGGTTGCTACCATTTCTTGTCCTTGAGAAAGGTGCTCCTAGTGCTTGTAGAGGGCTCTGGCCACCTTCCTaGGTGGGTGATCCATCCTCT +
Preference number: 4 (lower is better)
Translates to: WLLPFLVLEKGAPSACRGLWPPS*VGDPSS
Trigger: AGAGGATGGATCACCCACGCAGGAAGGTGGCCAGAG...CCCTCTACAAGCACTAGGAGCACCTTTCTCAAGGACAAGAAATGGTAGCAACCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647930.1
CDS-3UTR CCA 90 bp TATGATGTGCCAGAGACCAGGAAATGCCAGAGGGATGTTTGTAACAAAGCTGCCAATAGCTTCCGGACTTaGGCGGGTAGCGGTACACGG +
Preference number: 4 (lower is better)
Translates to: YDVPETRKCQRDVCNKAANSFRT*AGSGTR
Trigger: CCGTGTACCGCTACCCGCCCAAGTCCGGAAGCTATT...GGCAGCTTTGTTACAAACATCCCTCTGGCATTTCCTGGTCTCTGGCACATCATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
CDS-3UTR CCA 90 bp AACCAAGGAGGCTGCAGTTTGTCTTCTAGTGCATCTCTCTCAACTCAGACCAAGAATAGCTTCCGGACTTaGGCGGGTAGCGGTACACGG +
Preference number: 4 (lower is better)
Translates to: NQGGCSLSSSASLSTQTKNSFRT*AGSGTR
Trigger: CCGTGTACCGCTACCCGCCCAAGTCCGGAAGCTATT...CTTGGTCTGAGTTGAGAGAGATGCACTAGAAGACAAACTGCAGCCTCCTTGGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592271.1
CDS-3UTR CCA 90 bp CATTTCTTGTCCTTGAGAAAGGTGCTCCTAGTGCTTGTAGAGGGAAACGCTACGAATAGCTTCCGGACTTaGGCGGGTAGCGGTACACGG +
Preference number: 4 (lower is better)
Translates to: HFLSLRKVLLVLVEGNATNSFRT*AGSGTR
Trigger: CCGTGTACCGCTACCCGCCCAAGTCCGGAAGCTATT...CGTAGCGTTTCCCTCTACAAGCACTAGGAGCACCTTTCTCAAGGACAAGAAATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
CDS-3UTR CCA 90 bp GAGGGAAACGCTACGTCCGTGCAGTATGGCTCTCCCTTTCCACAGGAGCGATCCCTTTGGGAATGTAGCTaGCAATACCATTCTGGAACT +
Preference number: 4 (lower is better)
Translates to: EGNATSVQYGSPFPQERSLWECS*QYHSGT
Trigger: AGTTCCAGAATGGTATTGCCAGCTACATTCCCAAAG...GGATCGCTCCTGTGGAAAGGGAGAGCCATACTGCACGGACGTAGCGTTTCCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
CDS-3UTR CCA 90 bp CAATATACCGTGAGGACATTCCAGAGTCCCTGCAAAAGGTCTCGTGAGCTGCAGTGCACAGTCTCCGACTaGAGGCTGTTGTCTTTGGGA +
Preference number: 4 (lower is better)
Translates to: QYTVRTFQSPCKRSRELQCTVSD*RLLSLG
Trigger: TCCCAAAGACAACAGCCTCCAGTCGGAGACTGTGCA...CTGCAGCTCACGAGACCTTTTGCAGGGACTCTGGAATGTCCTCACGGTATATTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
CDS-3UTR CCA 90 bp CATTTCTTGTCCTTGAGAAAGGTGCTCCTAGTGCTTGTAGAGGGAAACGCTACGTCCAAGCACGTGAAGTaGAGGAACTGCTGGGGACGG +
Preference number: 4 (lower is better)
Translates to: HFLSLRKVLLVLVEGNATSKHVK*RNCWGR
Trigger: CCGTCCCCAGCAGTTCCTCCACTTCACGTGCTTGGA...CGTAGCGTTTCCCTCTACAAGCACTAGGAGCACCTTTCTCAAGGACAAGAAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
CDS-3UTR CCA 90 bp CGCTACGTCCGTGCAGTATGGCTCTCCCTTTCCACAGGAGCGATCCTCCAGCCCAAGAGTTTTGGGAAGTaGATTTGGAGAGACTCTTTT +
Preference number: 4 (lower is better)
Translates to: RYVRAVWLSLSTGAILQPKSFGK*IWRDSF
Trigger: AAAAGAGTCTCTCCAAATCCACTTCCCAAAACTCTT...GGGCTGGAGGATCGCTCCTGTGGAAAGGGAGAGCCATACTGCACGGACGTAGCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
CDS-3UTR CCA 90 bp GAAATTAGCCCATGGACCCCAGCTCCACCTGAACATCAATATACCGTGAGGACAATGGACATGACAGACTaGGCCAAGCTGCTGCTGGCA +
Preference number: 4 (lower is better)
Translates to: EISPWTPAPPEHQYTVRTMDMTD*AKLLLA
Trigger: TGCCAGCAGCAGCTTGGCCCAGTCTGTCATGTCCAT...TGTCCTCACGGTATATTGATGTTCAGGTGGAGCTGGGGTCCATGGGCTAATTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
CDS-3UTR CCA 90 bp CAATATACCGTGAGGACATTCCAGAGTCCCTGCAAAAGGTCTCGTGAGCTGCAGGTGTCAGTGCTGATCTaGGAGGATGCCATGGACATG +
Preference number: 4 (lower is better)
Translates to: QYTVRTFQSPCKRSRELQVSVLI*EDAMDM
Trigger: CATGTCCATGGCATCCTCCCAGATCAGCACTGACAC...CTGCAGCTCACGAGACCTTTTGCAGGGACTCTGGAATGTCCTCACGGTATATTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
CDS-3UTR CCA 90 bp GTGCCAGAGACCAGGAAATGCCAGAGGGATGTTTGTAACAAAGCTGCCAAACTCTGTAGGAGCCAGACATaGAGGAGACGGTGTCAGTGC +
Preference number: 4 (lower is better)
Translates to: VPETRKCQRDVCNKAAKLCRSQT*RRRCQC
Trigger: GCACTGACACCGTCTCCTCCATGTCTGGCTCCTACA...GAGTTTGGCAGCTTTGTTACAAACATCCCTCTGGCATTTCCTGGTCTCTGGCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
CDS-3UTR CCA 90 bp ACTCCTCACCCAGTGCTTGGCACACAGAGGTGGTCAACACATGTGTTTCTTGAAATCCTGCTCTCCAGCTaGGAGGCCAGCAAAGTTGCT +
Preference number: 4 (lower is better)
Translates to: TPHPVLGTQRWSTHVFLEILLSS*EASKVA
Trigger: AGCAACTTTGCTGGCCTCCCAGCTGGAGAGCAGGAT...TTCAAGAAACACATGTGTTGACCACCTCTGTGTGCCAAGCACTGGGTGAGGAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
CDS-3UTR CCA 90 bp AGGACCAGCTCCTTGGATGGAGTATTTCTGTGGGCCAGAGAGCTAAATGACAGCTACGTCCGTGCAGTATaGCTCTCCCTTTCCACAGGA +
Preference number: 4 (lower is better)
Translates to: RTSSLDGVFLWARELNDSYVRAV*LSLSTG
Trigger: TCCTGTGGAAAGGGAGAGCCATACTGCACGGACGTA...GCTGTCATTTAGCTCTCTGGCCCACAGAAATACTCCATCCAAGGAGCTGGTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
CDS-3UTR CCA 90 bp ACTCCTCACCCAGTGCTTGGCACACAGAGGTGGTCAACACATGTGTTTCTTGAATCCTCACCCAGTGCTTaGCACACAGAGGTGGTCAAC +
Preference number: 4 (lower is better)
Translates to: TPHPVLGTQRWSTHVFLESSPSA*HTEVVN
Trigger: GTTGACCACCTCTGTGTGCCAAGCACTGGGTGAGGA...TTCAAGAAACACATGTGTTGACCACCTCTGTGTGCCAAGCACTGGGTGAGGAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
CDS-3UTR CCA 90 bp CGATCCTCCAGCCCTACCCCAAACTGCAGGTTTCCAATTGGTTATGATGTGCCACTCCATCACTTCCTTTaGGGACCTGGGCACCAAACT +
Preference number: 4 (lower is better)
Translates to: RSSSPTPNCRFPIGYDVPLHHFL*GPGHQT
Trigger: AGTTTGGTGCCCAGGTCCCCAAAGGAAGTGATGGAG...TGGCACATCATAACCAATTGGAAACCTGCAGTTTGGGGTAGGGCTGGAGGATCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
CDS-3UTR CCA 90 bp CTCTGCAGCCACACAGAAACGAAGGACCCCCTGGGCACCAGGCTCTTTTTGAGGAGGGAAATCAGGAAGTaGGGTTATTGCTCAGCTTAT +
Preference number: 4 (lower is better)
Translates to: LCSHTETKDPLGTRLFLRREIRK*GYCSAY
Trigger: ATAAGCTGAGCAATAACCCCACTTCCTGATTTCCCT...CCTCAAAAAGAGCCTGGTGCCCAGGGGGTCCTTCGTTTCTGTGTGGCTGCAGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
CDS-3UTR CCA 90 bp CATTCCAGAGTCCCTGCAAAAGGTCTCGTGAGCTGCAGTTCATTGAGTGGCTTTCTCCAGATGAAGGACTaGGGCAAAAGGGTTGGCCAC +
Preference number: 4 (lower is better)
Translates to: HSRVPAKGLVSCSSLSGFLQMKD*GKRVGH
Trigger: GTGGCCAACCCTTTTGCCCCAGTCCTTCATCTGGAG...AAAGCCACTCAATGAACTGCAGCTCACGAGACCTTTTGCAGGGACTCTGGAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
CDS-3UTR CCA 90 bp TTCTTGAAATGTCACCTTAGGATGGAGTTGCAGGCCTCCCTGAATGCACCTGATCGGCTTAGAGTGTGGTaGTCTGTGCCCAGGAGATGC +
Preference number: 4 (lower is better)
Translates to: FLKCHLRMELQASLNAPDRLRVW*SVPRRC
Trigger: GCATCTCCTGGGCACAGACCACCACACTCTAAGCCG...ATCAGGTGCATTCAGGGAGGCCTGCAACTCCATCCTAAGGTGACATTTCAAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
CDS-3UTR CCA 90 bp CATTTCTTGTCCTTGAGAAAGGTGCTCCTAGTGCTTGTAGAGGGAAACGCTACGGTGCTAAACTCCAGGTaGGCAGGACCCCAACTCCCA +
Preference number: 4 (lower is better)
Translates to: HFLSLRKVLLVLVEGNATVLNSR*AGPQLP
Trigger: TGGGAGTTGGGGTCCTGCCCACCTGGAGTTTAGCAC...CGTAGCGTTTCCCTCTACAAGCACTAGGAGCACCTTTCTCAAGGACAAGAAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
CDS-3UTR CCA 90 bp TGGTTGCTACCATTTCTTGTCCTTGAGAAAGGTGCTCCTAGTGCTTGTAGAGGGGTGCTAAACTCCAGGTaGGCAGGACCCCAACTCCCA +
Preference number: 4 (lower is better)
Translates to: WLLPFLVLEKGAPSACRGVLNSR*AGPQLP
Trigger: TGGGAGTTGGGGTCCTGCCCACCTGGAGTTTAGCAC...CCCTCTACAAGCACTAGGAGCACCTTTCTCAAGGACAAGAAATGGTAGCAACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
CDS-3UTR CCA 90 bp TTGGCAAGGAAAAAGATGGGAAGGGAAAATATGGATGCAAAGGGCGATAGCAAGCAACTCACCAAGGCCTaGCCTGCCCAGGTAGTGCCC +
Preference number: 4 (lower is better)
Translates to: LARKKMGRENMDAKGDSKQLTKA*PAQVVP
Trigger: GGGCACTACCTGGGCAGGCCAGGCCTTGGTGAGTTG...CTTGCTATCGCCCTTTGCATCCATATTTTCCCTTCCCATCTTTTTCCTTGCCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000591615.1
CDS-3UTR CCA 90 bp TCTTGTTCTTTCATTTCTCAAGTCCTTTGCTCAGATAAAGGCTCCCTCAACACCCCCATCCAGGCCTCCTaGAGAACCAGGCCTTCCCCC +
Preference number: 4 (lower is better)
Translates to: SCSFISQVLCSDKGSLNTPIQAS*RTRPSP
Trigger: GGGGGAAGGCCTGGTTCTCCAGGAGGCCTGGATGGG...GGTGTTGAGGGAGCCTTTATCTGAGCAAAGGACTTGAGAAATGAAAGAACAAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000591615.1
CDS-3UTR TCA 90 bp CTCAAGGCTCTCCATCACTTCCTTTGGGGACCTGGGCACCAAACTGAGAATCACACCTTCAGGATGAGTTaGGTCAAACTTCTCTCCTCC +
Preference number: 4 (lower is better)
Translates to: LKALHHFLWGPGHQTENHTFRMS*VKLLSS
Trigger: GGAGGAGAGAAGTTTGACTCAACTCATCCTGAAGGT...GTGATTCTCAGTTTGGTGCCCAGGTCCCCAAAGGAAGTGATGGAGAGCCTTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
CDS-3UTR TCA 90 bp GAAATTAGCCCATGGACCCCAGCTCCACCTGAACATCAATATACCGTGAGGACACCTGAAGGAGGTAGCTaGCCCCGTCTACTACTTGTT +
Preference number: 4 (lower is better)
Translates to: EISPWTPAPPEHQYTVRTPEGGS*PRLLLV
Trigger: AACAAGTAGTAGACGGGGTCAGCTACCTCCTTCAGG...TGTCCTCACGGTATATTGATGTTCAGGTGGAGCTGGGGTCCATGGGCTAATTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
CDS-3UTR TCA 90 bp GTGCCAGAGACCAGGAAATGCCAGAGGGATGTTTGTAACAAAGCTGCCAAACTCGTTCCCTCTGAGAGGTaGGGGATTGTGGTTACAGGT +
Preference number: 4 (lower is better)
Translates to: VPETRKCQRDVCNKAAKLVPSER*GIVVTG
Trigger: ACCTGTAACCACAATCCCTCACCTCTCAGAGGGAAC...GAGTTTGGCAGCTTTGTTACAAACATCCCTCTGGCATTTCCTGGTCTCTGGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
CDS-3UTR TCA 90 bp CATTCCAGAGTCCCTGCAAAAGGTCTCGTGAGCTGCAGTTCATTGAGTGGCTTTGTTCCCTCTGAGAGGTaGGGGATTGTGGTTACAGGT +
Preference number: 4 (lower is better)
Translates to: HSRVPAKGLVSCSSLSGFVPSER*GIVVTG
Trigger: ACCTGTAACCACAATCCCTCACCTCTCAGAGGGAAC...AAAGCCACTCAATGAACTGCAGCTCACGAGACCTTTTGCAGGGACTCTGGAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
CDS-3UTR TCA 90 bp GTGCCAGAGACCAGGAAATGCCAGAGGGATGTTTGTAACAAAGCTGCCAAACTCGACCCCAGCTCCACCTaGACATCAATATACCGTGAG +
Preference number: 4 (lower is better)
Translates to: VPETRKCQRDVCNKAAKLDPSST*TSIYRE
Trigger: CTCACGGTATATTGATGTTCAGGTGGAGCTGGGGTC...GAGTTTGGCAGCTTTGTTACAAACATCCCTCTGGCATTTCCTGGTCTCTGGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
CDS-3UTR TCA 90 bp TGGTTGCTACCATTTCTTGTCCTTGAGAAAGGTGCTCCTAGTGCTTGTAGAGGGAGTTGCAGGCCTCCCTaGATGCACCTGATCAGGAGA +
Preference number: 4 (lower is better)
Translates to: WLLPFLVLEKGAPSACRGSCRPP*MHLIRR
Trigger: TCTCCTGATCAGGTGCATTCAGGGAGGCCTGCAACT...CCCTCTACAAGCACTAGGAGCACCTTTCTCAAGGACAAGAAATGGTAGCAACCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
CDS-3UTR TCA 90 bp GAGGGAAACGCTACGTCCGTGCAGTATGGCTCTCCCTTTCCACAGGAGCGATCCAACACATGTGTTTCTTaGAATGTCACCTTAGGATGG +
Preference number: 4 (lower is better)
Translates to: EGNATSVQYGSPFPQERSNTCVS*NVTLGW
Trigger: CCATCCTAAGGTGACATTTCAAGAAACACATGTGTT...GGATCGCTCCTGTGGAAAGGGAGAGCCATACTGCACGGACGTAGCGTTTCCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
CDS-3UTR TCA 90 bp GTGCCAGAGACCAGGAAATGCCAGAGGGATGTTTGTAACAAAGCTGCCAAACTCATGGGACTGAGGCCTTaGGGAATCTTTCCGTGCTTC +
Preference number: 4 (lower is better)
Translates to: VPETRKCQRDVCNKAAKLMGLRP*GIFPCF
Trigger: GAAGCACGGAAAGATTCCTCAAGGCCTCAGTCCCAT...GAGTTTGGCAGCTTTGTTACAAACATCCCTCTGGCATTTCCTGGTCTCTGGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
CDS-3UTR TCA 90 bp CCTGAACATCAATATACCGTGAGGACATTCCAGAGTCCCTGCAAAAGGTCTCGTAAAAGGGTTGGCCACTaGCCTGTCCTCATCAGGCTG +
Preference number: 4 (lower is better)
Translates to: PEHQYTVRTFQSPCKRSRKRVGH*PVLIRL
Trigger: CAGCCTGATGAGGACAGGTCAGTGGCCAACCCTTTT...ACGAGACCTTTTGCAGGGACTCTGGAATGTCCTCACGGTATATTGATGTTCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
CDS-3UTR TCA 90 bp CATTTCTTGTCCTTGAGAAAGGTGCTCCTAGTGCTTGTAGAGGGAAACGCTACGGTGACTGTCTCCAGATaGAGGACTGGGGCAAAAGGG +
Preference number: 4 (lower is better)
Translates to: HFLSLRKVLLVLVEGNATVTVSR*RTGAKG
Trigger: CCCTTTTGCCCCAGTCCTTCATCTGGAGACAGTCAC...CGTAGCGTTTCCCTCTACAAGCACTAGGAGCACCTTTCTCAAGGACAAGAAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
CDS-3UTR TCA 90 bp CGATCCTCCAGCCCTACCCCAAACTGCAGGTTTCCAATTGGTTATGATGTGCCAGGTGAACTGTTGACGTaGCTATGTGACTGTCTCCAG +
Preference number: 4 (lower is better)
Translates to: RSSSPTPNCRFPIGYDVPGELLT*LCDCLQ
Trigger: CTGGAGACAGTCACATAGTCACGTCAACAGTTCACC...TGGCACATCATAACCAATTGGAAACCTGCAGTTTGGGGTAGGGCTGGAGGATCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
CDS-3UTR TCA 90 bp TGTCCCCACTGTAGTGTGACCACAAGTGTACTCCAGGGAGAGGGGTACACAGATCCTCTTCTCTTTGGGTaGACTGTTGACGTGACTATG +
Preference number: 4 (lower is better)
Translates to: CPHCSVTTSVLQGEGYTDPLLFG*TVDVTM
Trigger: CATAGTCACGTCAACAGTTCACCCAAAGAGAAGAGG...ATCTGTGTACCCCTCTCCCTGGAGTACACTTGTGGTCACACTACAGTGGGGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
CDS-3UTR TCA 90 bp AGACTCCAGGAGCTCTTCCAGTCCTCTAGCAACAAGAGATCCCATACAACCAAGGGTTGCCTAAAGAGGTaGCAGGGAGAGATCTGTCCT +
Preference number: 4 (lower is better)
Translates to: RLQELFQSSSNKRSHTTKGCLKR*QGEICP
Trigger: AGGACAGATCTCTCCCTGTCACCTCTTTAGGCAACC...CTTGGTTGTATGGGATCTCTTGTTGCTAGAGGACTGGAAGAGCTCCTGGAGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592271.1
CDS-3UTR TCA 90 bp CCAATCCCACTCCCATTAACCTGGGCCATGTCAGTGTCTAAGTTGGCCCTGCCCCTTTATCCTTTCGCTTaGAATGTTTCTCACTCTGGC +
Preference number: 4 (lower is better)
Translates to: PIPLPLTWAMSVSKLALPLYPFA*NVSHSG
Trigger: GCCAGAGTGAGAAACATTTCAAGCGAAAGGATAAAG...GGGCAGGGCCAACTTAGACACTGACATGGCCCAGGTTAATGGGAGTGGGATTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591615.1
CDS-3UTR GCA 90 bp AGCGATCCTCCAGCCCTACCCCAAACTGCAGGTTTCCAATTGGTTATGATGTGCACATTCCAGAGTCCCTaGAAAAGGTCTCGTGAGCTG +
Preference number: 4 (lower is better)
Translates to: SDPPALPQTAGFQLVMMCTFQSP*KRSREL
Trigger: CAGCTCACGAGACCTTTTGCAGGGACTCTGGAATGT...GCACATCATAACCAATTGGAAACCTGCAGTTTGGGGTAGGGCTGGAGGATCGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
CDS-3UTR GCA 90 bp AGAAAGGTGCTCCTAGTGCTTGTAGAGGGAAACGCTACGTCCGTGCAGTATGGCCCAGAGACCAGGAAATaGCAGAGGGATGTTTGTAAC +
Preference number: 4 (lower is better)
Translates to: RKVLLVLVEGNATSVQYGPETRK*QRDVCN
Trigger: GTTACAAACATCCCTCTGGCATTTCCTGGTCTCTGG...GCCATACTGCACGGACGTAGCGTTTCCCTCTACAAGCACTAGGAGCACCTTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
CDS-3UTR GCA 90 bp CATTTCTTGTCCTTGAGAAAGGTGCTCCTAGTGCTTGTAGAGGGAAACGCTACGCTGGCCACATGCTGCTaGCTGAACTTAGCTCAAGGC +
Preference number: 4 (lower is better)
Translates to: HFLSLRKVLLVLVEGNATLATCC*LNLAQG
Trigger: GCCTTGAGCTAAGTTCAGGCAGCAGCATGTGGCCAG...CGTAGCGTTTCCCTCTACAAGCACTAGGAGCACCTTTCTCAAGGACAAGAAATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
CDS-3UTR GCA 90 bp TGGTTGCTACCATTTCTTGTCCTTGAGAAAGGTGCTCCTAGTGCTTGTAGAGGGAGAGGACTAAGCACCTaGTGCGAGGAAGGACAGGGA +
Preference number: 4 (lower is better)
Translates to: WLLPFLVLEKGAPSACRGRGLST*CEEGQG
Trigger: TCCCTGTCCTTCCTCGCAGCAGGTGCTTAGTCCTCT...CCCTCTACAAGCACTAGGAGCACCTTTCTCAAGGACAAGAAATGGTAGCAACCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
CDS-3UTR GCA 90 bp CCAATCCCACTCCCATTAACCTGGGCCATGTCAGTGTCTAAGTTGGCCCTGCCCATTTCTCAAGTCCTTTaGTCAGATAAAGGCTCCCTC +
Preference number: 4 (lower is better)
Translates to: PIPLPLTWAMSVSKLALPISQVL*SDKGSL
Trigger: GAGGGAGCCTTTATCTGAGCAAAGGACTTGAGAAAT...GGGCAGGGCCAACTTAGACACTGACATGGCCCAGGTTAATGGGAGTGGGATTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591615.1
CDS-3UTR CCA 90 bp ACTCCTCACCCAGTGCTTGGCACACAGAGGTGGTCAACACATGTGTTTCTTGAATGCACAGTCTCCGACTaGAGGCTGTTGTCTTTGGGA +
Preference number: 4 (lower is better)
Translates to: TPHPVLGTQRWSTHVFLECTVSD*RLLSLG
Trigger: TCCCAAAGACAACAGCCTCCAGTCGGAGACTGTGCA...TTCAAGAAACACATGTGTTGACCACCTCTGTGTGCCAAGCACTGGGTGAGGAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
CDS-3UTR CCA 90 bp TGGTTGCTACCATTTCTTGTCCTTGAGAAAGGTGCTCCTAGTGCTTGTAGAGGGATGGACATGACAGACTaGGCCAAGCTGCTGCTGGCA +
Preference number: 4 (lower is better)
Translates to: WLLPFLVLEKGAPSACRGMDMTD*AKLLLA
Trigger: TGCCAGCAGCAGCTTGGCCCAGTCTGTCATGTCCAT...CCCTCTACAAGCACTAGGAGCACCTTTCTCAAGGACAAGAAATGGTAGCAACCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
CDS-3UTR CCA 90 bp CATTTCTTGTCCTTGAGAAAGGTGCTCCTAGTGCTTGTAGAGGGAAACGCTACGTGTAGGAGCCAGACATaGAGGAGACGGTGTCAGTGC +
Preference number: 4 (lower is better)
Translates to: HFLSLRKVLLVLVEGNATCRSQT*RRRCQC
Trigger: GCACTGACACCGTCTCCTCCATGTCTGGCTCCTACA...CGTAGCGTTTCCCTCTACAAGCACTAGGAGCACCTTTCTCAAGGACAAGAAATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
CDS-3UTR CCA 90 bp TGGTTGCTACCATTTCTTGTCCTTGAGAAAGGTGCTCCTAGTGCTTGTAGAGGGTCTGGCCTTCCTGCGTaGGTGATCCATCCTCTTCCT +
Preference number: 4 (lower is better)
Translates to: WLLPFLVLEKGAPSACRGSGLPA*VIHPLP
Trigger: AGGAAGAGGATGGATCACCCACGCAGGAAGGCCAGA...CCCTCTACAAGCACTAGGAGCACCTTTCTCAAGGACAAGAAATGGTAGCAACCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000319945.10
CDS-3UTR CCA 90 bp GTGCCAGAGACCAGGAAATGCCAGAGGGATGTTTGTAACAAAGCTGCCAAACTCCTCCATCACTTCCTTTaGGGACCTGGGCACCAAACT +
Preference number: 4 (lower is better)
Translates to: VPETRKCQRDVCNKAAKLLHHFL*GPGHQT
Trigger: AGTTTGGTGCCCAGGTCCCCAAAGGAAGTGATGGAG...GAGTTTGGCAGCTTTGTTACAAACATCCCTCTGGCATTTCCTGGTCTCTGGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
CDS-3UTR CCA 90 bp AGAAAGGTGCTCCTAGTGCTTGTAGAGGGAAACGCTACGTCCGTGCAGTATGGCGTCACCTGCTGCTTCTaGGCTCATATTTCAGGGAAA +
Preference number: 4 (lower is better)
Translates to: RKVLLVLVEGNATSVQYGVTCCF*AHISGK
Trigger: TTTCCCTGAAATATGAGCCCAGAAGCAGCAGGTGAC...GCCATACTGCACGGACGTAGCGTTTCCCTCTACAAGCACTAGGAGCACCTTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
CDS-3UTR CCA 90 bp ACCCCAAACTGCAGGTTTCCAATTGGTTATGATGTGCCAGAGACCAGGAAATGCTCAGGAAGGGGGTCCTaGCCACTGTGGCTACTGTTT +
Preference number: 4 (lower is better)
Translates to: TPNCRFPIGYDVPETRKCSGRGS*PLWLLF
Trigger: AAACAGTAGCCACAGTGGCCAGGACCCCCTTCCTGA...GCATTTCCTGGTCTCTGGCACATCATAACCAATTGGAAACCTGCAGTTTGGGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
CDS-3UTR CCA 90 bp TTCTTGAAATGTCACCTTAGGATGGAGTTGCAGGCCTCCCTGAATGCACCTGATAGCAGGAAGGAGCCCTaGGTCTCCATAGTTAGGCTG +
Preference number: 4 (lower is better)
Translates to: FLKCHLRMELQASLNAPDSRKEP*VSIVRL
Trigger: CAGCCTAACTATGGAGACCCAGGGCTCCTTCCTGCT...ATCAGGTGCATTCAGGGAGGCCTGCAACTCCATCCTAAGGTGACATTTCAAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
CDS-3UTR CCA 90 bp TATGATGTGCCAGAGACCAGGAAATGCCAGAGGGATGTTTGTAACAAAGCTGCCAGCAGGAAGGAGCCCTaGGTCTCCATAGTTAGGCTG +
Preference number: 4 (lower is better)
Translates to: YDVPETRKCQRDVCNKAASRKEP*VSIVRL
Trigger: CAGCCTAACTATGGAGACCCAGGGCTCCTTCCTGCT...GGCAGCTTTGTTACAAACATCCCTCTGGCATTTCCTGGTCTCTGGCACATCATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
3UTR CAA 72 bp GATCCTCCAGCCCTACCCCAAACTGCAGGTTTCCAATaGGTTATGATGTGCCAGAGACCAGGAAATGCCAGA +
Preference number: 4 (lower is better)
Translates to: DPPALPQTAGFQ*VMMCQRPGNAR
Trigger: TCTGGCATTTCCTGGTCTCTGGCACATCATAACCAATTGGAAACCTGCAGTTTGGGGTAGGGCTGGAGGATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
3UTR CAA 72 bp CCACTCCCATTAACCTGGGCCATGTCAGTGTCTAAGTaGGCCCTGCCCCATTTACTTTTAGGAGCACACTCT +
Preference number: 4 (lower is better)
Translates to: PLPLTWAMSVSK*ALPHLLLGAHS
Trigger: AGAGTGTGCTCCTAAAAGTAAATGGGGCAGGGCCAACTTAGACACTGACATGGCCCAGGTTAATGGGAGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591615.1
CDS-3UTR TCA 90 bp CAATATACCGTGAGGACATTCCAGAGTCCCTGCAAAAGGTCTCGTGAGCTGCAGACCTTCAGGATGAGTTaGGTCAAACTTCTCTCCTCC +
Preference number: 4 (lower is better)
Translates to: QYTVRTFQSPCKRSRELQTFRMS*VKLLSS
Trigger: GGAGGAGAGAAGTTTGACTCAACTCATCCTGAAGGT...CTGCAGCTCACGAGACCTTTTGCAGGGACTCTGGAATGTCCTCACGGTATATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
CDS-3UTR TCA 90 bp TCCAGGAGCTCTTCCAGTCCTCTAGCAACAAGAGATCCCATACAACCAAGGAGGACCTTCAGGATGAGTTaGGTCAAACTTCTCTCCTCC +
Preference number: 4 (lower is better)
Translates to: SRSSSSPLATRDPIQPRRTFRMS*VKLLSS
Trigger: GGAGGAGAGAAGTTTGACTCAACTCATCCTGAAGGT...CCTCCTTGGTTGTATGGGATCTCTTGTTGCTAGAGGACTGGAAGAGCTCCTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592271.1
CDS-3UTR TCA 90 bp CCATTTCTTGTCCTTGAGAAAGGTGCTCCTAGTGCTTGTAGAGGGAAACGCTACCCTGGTAATAGATGGTaGTGGCTACCCGAGCATCTG +
Preference number: 4 (lower is better)
Translates to: PFLVLEKGAPSACRGKRYPGNRW*WLPEHL
Trigger: CAGATGCTCGGGTAGCCATCACCATCTATTACCAGG...GTAGCGTTTCCCTCTACAAGCACTAGGAGCACCTTTCTCAAGGACAAGAAATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
CDS-3UTR TCA 90 bp CCTGAACATCAATATACCGTGAGGACATTCCAGAGTCCCTGCAAAAGGTCTCGTCCTGGTAATAGATGGTaGTGGCTACCCGAGCATCTG +
Preference number: 4 (lower is better)
Translates to: PEHQYTVRTFQSPCKRSRPGNRW*WLPEHL
Trigger: CAGATGCTCGGGTAGCCATCACCATCTATTACCAGG...ACGAGACCTTTTGCAGGGACTCTGGAATGTCCTCACGGTATATTGATGTTCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
CDS-3UTR TCA 90 bp ATTGTGGTTACAGGTTGTAACAGCTGTCACAGGAGGGTAAAAAGTCTCCAGCATGGCAGGCAGAACTGCTaGCACACTCCTCGCTTGTAC +
Preference number: 4 (lower is better)
Translates to: IVVTGCNSCHRRVKSLQHGRQNC*HTPRLY
Trigger: GTACAAGCGAGGAGTGTGTCAGCAGTTCTGCCTGCC...ATGCTGGAGACTTTTTACCCTCCTGTGACAGCTGTTACAACCTGTAACCACAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
CDS-3UTR TCA 90 bp ACCCCAAACTGCAGGTTTCCAATTGGTTATGATGTGCCAGAGACCAGGAAATGCCCTGAAGGAGGTAGCTaGCCCCGTCTACTACTTGTT +
Preference number: 4 (lower is better)
Translates to: TPNCRFPIGYDVPETRKCPEGGS*PRLLLV
Trigger: AACAAGTAGTAGACGGGGTCAGCTACCTCCTTCAGG...GCATTTCCTGGTCTCTGGCACATCATAACCAATTGGAAACCTGCAGTTTGGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
CDS-3UTR TCA 90 bp CAATATACCGTGAGGACATTCCAGAGTCCCTGCAAAAGGTCTCGTGAGCTGCAGGTCAGATGTCTGGGATaGGATGATGGGGTTAAAGCT +
Preference number: 4 (lower is better)
Translates to: QYTVRTFQSPCKRSRELQVRCLG*DDGVKA
Trigger: AGCTTTAACCCCATCATCTCATCCCAGACATCTGAC...CTGCAGCTCACGAGACCTTTTGCAGGGACTCTGGAATGTCCTCACGGTATATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
CDS-3UTR TCA 90 bp AGAAAGGTGCTCCTAGTGCTTGTAGAGGGAAACGCTACGTCCGTGCAGTATGGCTGGTGGAATATTCTCTaGGGATGGATGCTCTTCAGA +
Preference number: 4 (lower is better)
Translates to: RKVLLVLVEGNATSVQYGWWNIL*GWMLFR
Trigger: TCTGAAGAGCATCCATCCTCAGAGAATATTCCACCA...GCCATACTGCACGGACGTAGCGTTTCCCTCTACAAGCACTAGGAGCACCTTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
CDS-3UTR TCA 90 bp CCATTTCTTGTCCTTGAGAAAGGTGCTCCTAGTGCTTGTAGAGGGAAACGCTACTTGAGTTTGAGTCCCTaGCTGCTGCTGTCAGACAGG +
Preference number: 4 (lower is better)
Translates to: PFLVLEKGAPSACRGKRYLSLSP*LLLSDR
Trigger: CCTGTCTGACAGCAGCAGTCAGGGACTCAAACTCAA...GTAGCGTTTCCCTCTACAAGCACTAGGAGCACCTTTCTCAAGGACAAGAAATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
CDS-3UTR TCA 90 bp ACCCCAAACTGCAGGTTTCCAATTGGTTATGATGTGCCAGAGACCAGGAAATGCTTGAGTTTGAGTCCCTaGCTGCTGCTGTCAGACAGG +
Preference number: 4 (lower is better)
Translates to: TPNCRFPIGYDVPETRKCLSLSP*LLLSDR
Trigger: CCTGTCTGACAGCAGCAGTCAGGGACTCAAACTCAA...GCATTTCCTGGTCTCTGGCACATCATAACCAATTGGAAACCTGCAGTTTGGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
CDS-3UTR TCA 90 bp CAATATACCGTGAGGACATTCCAGAGTCCCTGCAAAAGGTCTCGTGAGCTGCAGCAGATGACGACAAGGTaGGATTCTCACTTTCTGGAG +
Preference number: 4 (lower is better)
Translates to: QYTVRTFQSPCKRSRELQQMTTR*DSHFLE
Trigger: CTCCAGAAAGTGAGAATCTCACCTTGTCGTCATCTG...CTGCAGCTCACGAGACCTTTTGCAGGGACTCTGGAATGTCCTCACGGTATATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
CDS-3UTR TCA 90 bp ACCCCAAACTGCAGGTTTCCAATTGGTTATGATGTGCCAGAGACCAGGAAATGCGTTCCCTCTGAGAGGTaGGGGATTGTGGTTACAGGT +
Preference number: 4 (lower is better)
Translates to: TPNCRFPIGYDVPETRKCVPSER*GIVVTG
Trigger: ACCTGTAACCACAATCCCTCACCTCTCAGAGGGAAC...GCATTTCCTGGTCTCTGGCACATCATAACCAATTGGAAACCTGCAGTTTGGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
CDS-3UTR TCA 90 bp AGGCTCTCCATCACTTCCTTTGGGGACCTGGGCACCAAACTGAGAATCACTGGTAACATCAATATACCGTaGGGACATTCCAGAGTCCCT +
Preference number: 4 (lower is better)
Translates to: RLSITSFGDLGTKLRITGNINIP*GHSRVP
Trigger: AGGGACTCTGGAATGTCCTCACGGTATATTGATGTT...ACCAGTGATTCTCAGTTTGGTGCCCAGGTCCCCAAAGGAAGTGATGGAGAGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
CDS-3UTR TCA 90 bp TGGTTGCTACCATTTCTTGTCCTTGAGAAAGGTGCTCCTAGTGCTTGTAGAGGGGACCCCAGCTCCACCTaGACATCAATATACCGTGAG +
Preference number: 4 (lower is better)
Translates to: WLLPFLVLEKGAPSACRGDPSST*TSIYRE
Trigger: CTCACGGTATATTGATGTTCAGGTGGAGCTGGGGTC...CCCTCTACAAGCACTAGGAGCACCTTTCTCAAGGACAAGAAATGGTAGCAACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
CDS-3UTR TCA 90 bp CATTTCTTGTCCTTGAGAAAGGTGCTCCTAGTGCTTGTAGAGGGAAACGCTACGGACCCCAGCTCCACCTaGACATCAATATACCGTGAG +
Preference number: 4 (lower is better)
Translates to: HFLSLRKVLLVLVEGNATDPSST*TSIYRE
Trigger: CTCACGGTATATTGATGTTCAGGTGGAGCTGGGGTC...CGTAGCGTTTCCCTCTACAAGCACTAGGAGCACCTTTCTCAAGGACAAGAAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
CDS-3UTR TCA 90 bp GTCCTTGAGAAAGGTGCTCCTAGTGCTTGTAGAGGGAAACGCTACGTCCGTGCAGTTTCCAATTGGTTATaGTGTGCCAGAGACCAGGAA +
Preference number: 4 (lower is better)
Translates to: VLEKGAPSACRGKRYVRAVSNWL*CARDQE
Trigger: TTCCTGGTCTCTGGCACATCATAACCAATTGGAAAC...TGCACGGACGTAGCGTTTCCCTCTACAAGCACTAGGAGCACCTTTCTCAAGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
CDS-3UTR TCA 90 bp TTTGGGGACCTGGGCACCAAACTGAGAATCACTGGTCCACATTTCTCTCAACCACTCCCTGAATGCACCTaGTCAGGAGAAATGCTCCTT +
Preference number: 4 (lower is better)
Translates to: FGDLGTKLRITGPHFSQPLPECT*SGEMLL
Trigger: AAGGAGCATTTCTCCTGATCAGGTGCATTCAGGGAG...TGGTTGAGAGAAATGTGGACCAGTGATTCTCAGTTTGGTGCCCAGGTCCCCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
CDS-3UTR TCA 90 bp ACTCCTCACCCAGTGCTTGGCACACAGAGGTGGTCAACACATGTGTTTCTTGAACTCCCTGAATGCACCTaGTCAGGAGAAATGCTCCTT +
Preference number: 4 (lower is better)
Translates to: TPHPVLGTQRWSTHVFLELPECT*SGEMLL
Trigger: AAGGAGCATTTCTCCTGATCAGGTGCATTCAGGGAG...TTCAAGAAACACATGTGTTGACCACCTCTGTGTGCCAAGCACTGGGTGAGGAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
CDS-3UTR TCA 90 bp TTTGGGGACCTGGGCACCAAACTGAGAATCACTGGTCCACATTTCTCTCAACCAACCTGGGCACCAAACTaGGAATCACTGGTCCACATT +
Preference number: 4 (lower is better)
Translates to: FGDLGTKLRITGPHFSQPTWAPN*ESLVHI
Trigger: AATGTGGACCAGTGATTCTCAGTTTGGTGCCCAGGT...TGGTTGAGAGAAATGTGGACCAGTGATTCTCAGTTTGGTGCCCAGGTCCCCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
CDS-3UTR TCA 90 bp CCTGAACATCAATATACCGTGAGGACATTCCAGAGTCCCTGCAAAAGGTCTCGTACAACCACTAGGCAGTaGGACAGTCACTGCACTCCT +
Preference number: 4 (lower is better)
Translates to: PEHQYTVRTFQSPCKRSRTTTRQ*DSHCTP
Trigger: AGGAGTGCAGTGACTGTCTCACTGCCTAGTGGTTGT...ACGAGACCTTTTGCAGGGACTCTGGAATGTCCTCACGGTATATTGATGTTCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
CDS-3UTR TCA 90 bp AACTGCAGGTTTCCAATTGGTTATGATGTGCCAGAGACCAGGAAATGCCAGAGGACAACCACTAGGCAGTaGGACAGTCACTGCACTCCT +
Preference number: 4 (lower is better)
Translates to: NCRFPIGYDVPETRKCQRTTTRQ*DSHCTP
Trigger: AGGAGTGCAGTGACTGTCTCACTGCCTAGTGGTTGT...CCTCTGGCATTTCCTGGTCTCTGGCACATCATAACCAATTGGAAACCTGCAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
CDS-3UTR TCA 90 bp TGTCCCCACTGTAGTGTGACCACAAGTGTACTCCAGGGAGAGGGGTACACAGATTGGCTACTGTTTACCTaGATCTCCTTCATCTCAGCT +
Preference number: 4 (lower is better)
Translates to: CPHCSVTTSVLQGEGYTDWLLFT*ISFISA
Trigger: AGCTGAGATGAAGGAGATTCAGGTAAACAGTAGCCA...ATCTGTGTACCCCTCTCCCTGGAGTACACTTGTGGTCACACTACAGTGGGGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
CDS-3UTR TCA 90 bp TGGTTGCTACCATTTCTTGTCCTTGAGAAAGGTGCTCCTAGTGCTTGTAGAGGGCCTTGGACATGGGACTaGGGCCTTGAGGAATCTTTC +
Preference number: 4 (lower is better)
Translates to: WLLPFLVLEKGAPSACRGPWTWD*GLEESF
Trigger: GAAAGATTCCTCAAGGCCTCAGTCCCATGTCCAAGG...CCCTCTACAAGCACTAGGAGCACCTTTCTCAAGGACAAGAAATGGTAGCAACCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
CDS-3UTR TCA 90 bp ATTGTGGTTACAGGTTGTAACAGCTGTCACAGGAGGGTAAAAAGTCTCCAGCATCCTCATCAGGCTGACTaGGGACCAGCTCCTTGGATG +
Preference number: 4 (lower is better)
Translates to: IVVTGCNSCHRRVKSLQHPHQAD*GPAPWM
Trigger: CATCCAAGGAGCTGGTCCTCAGTCAGCCTGATGAGG...ATGCTGGAGACTTTTTACCCTCCTGTGACAGCTGTTACAACCTGTAACCACAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
CDS-3UTR TCA 90 bp AGCGATCCTCCAGCCCTACCCCAAACTGCAGGTTTCCAATTGGTTATGATGTGCGTTGACGTGACTATGTaGCTGTCTCCAGATGAAGGA +
Preference number: 4 (lower is better)
Translates to: SDPPALPQTAGFQLVMMCVDVTM*LSPDEG
Trigger: TCCTTCATCTGGAGACAGTCACATAGTCACGTCAAC...GCACATCATAACCAATTGGAAACCTGCAGTTTGGGGTAGGGCTGGAGGATCGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
CDS-3UTR TCA 90 bp TCTTGTTCTTTCATTTCTCAAGTCCTTTGCTCAGATAAAGGCTCCCTCAACACCGTAGTGCCCTGGGCCTaGGCCCAGGATCTGTTTCCT +
Preference number: 4 (lower is better)
Translates to: SCSFISQVLCSDKGSLNTVVPWA*AQDLFP
Trigger: AGGAAACAGATCCTGGGCTCAGGCCCAGGGCACTAC...GGTGTTGAGGGAGCCTTTATCTGAGCAAAGGACTTGAGAAATGAAAGAACAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591615.1
CDS-3UTR GCA 90 bp GAAATTAGCCCATGGACCCCAGCTCCACCTGAACATCAATATACCGTGAGGACAGACTCGCTGCAGGAATaGTCATCTTCCTCTTCATGC +
Preference number: 4 (lower is better)
Translates to: EISPWTPAPPEHQYTVRTDSLQE*SSSSSC
Trigger: GCATGAAGAGGAAGATGAGCATTCCTGCAGCGAGTC...TGTCCTCACGGTATATTGATGTTCAGGTGGAGCTGGGGTCCATGGGCTAATTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
CDS-3UTR GCA 90 bp CATTCCAGAGTCCCTGCAAAAGGTCTCGTGAGCTGCAGTTCATTGAGTGGCTTTGACTCGCTGCAGGAATaGTCATCTTCCTCTTCATGC +
Preference number: 4 (lower is better)
Translates to: HSRVPAKGLVSCSSLSGFDSLQE*SSSSSC
Trigger: GCATGAAGAGGAAGATGAGCATTCCTGCAGCGAGTC...AAAGCCACTCAATGAACTGCAGCTCACGAGACCTTTTGCAGGGACTCTGGAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
CDS-3UTR GCA 90 bp CGATCCTCCAGCCCTACCCCAAACTGCAGGTTTCCAATTGGTTATGATGTGCCACAGCTTATTGTCCAGTaGTTTCACGCTTGCGATGTC +
Preference number: 4 (lower is better)
Translates to: RSSSPTPNCRFPIGYDVPQLIVQ*FHACDV
Trigger: GACATCGCAAGCGTGAAAGCACTGGACAATAAGCTG...TGGCACATCATAACCAATTGGAAACCTGCAGTTTGGGGTAGGGCTGGAGGATCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
CDS-3UTR GCA 90 bp CATTCCAGAGTCCCTGCAAAAGGTCTCGTGAGCTGCAGTTCATTGAGTGGCTTTACATTCCAGAGTCCCTaGAAAAGGTCTCGTGAGCTG +
Preference number: 4 (lower is better)
Translates to: HSRVPAKGLVSCSSLSGFTFQSP*KRSREL
Trigger: CAGCTCACGAGACCTTTTGCAGGGACTCTGGAATGT...AAAGCCACTCAATGAACTGCAGCTCACGAGACCTTTTGCAGGGACTCTGGAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
CDS-3UTR GCA 90 bp TGTCCCCACTGTAGTGTGACCACAAGTGTACTCCAGGGAGAGGGGTACACAGATAGCCCTACCCCAAACTaGAGGTTTCCAATTGGTTAT +
Preference number: 4 (lower is better)
Translates to: CPHCSVTTSVLQGEGYTDSPTPN*RFPIGY
Trigger: ATAACCAATTGGAAACCTGCAGTTTGGGGTAGGGCT...ATCTGTGTACCCCTCTCCCTGGAGTACACTTGTGGTCACACTACAGTGGGGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
CDS-3UTR GCA 90 bp TTCTTGAAATGTCACCTTAGGATGGAGTTGCAGGCCTCCCTGAATGCACCTGATGAAACGCTACGTCCGTaGAGTATGGCTCTCCCTTTC +
Preference number: 4 (lower is better)
Translates to: FLKCHLRMELQASLNAPDETLRP*SMALPF
Trigger: GAAAGGGAGAGCCATACTGCACGGACGTAGCGTTTC...ATCAGGTGCATTCAGGGAGGCCTGCAACTCCATCCTAAGGTGACATTTCAAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
CDS-3UTR GCA 90 bp TTCTTGAAATGTCACCTTAGGATGGAGTTGCAGGCCTCCCTGAATGCACCTGATCTGCTGGCCACATGCTaGTGCCTGAACTTAGCTCAA +
Preference number: 4 (lower is better)
Translates to: FLKCHLRMELQASLNAPDLLATC*CLNLAQ
Trigger: TTGAGCTAAGTTCAGGCAGCAGCATGTGGCCAGCAG...ATCAGGTGCATTCAGGGAGGCCTGCAACTCCATCCTAAGGTGACATTTCAAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
CDS-3UTR GCA 90 bp GAAATTAGCCCATGGACCCCAGCTCCACCTGAACATCAATATACCGTGAGGACATGCACACACCAGGTGTaGAGACCAAAGCAAAGTGAG +
Preference number: 4 (lower is better)
Translates to: EISPWTPAPPEHQYTVRTCTHQV*RPKQSE
Trigger: CTCACTTTGCTTTGGTCTGCACACCTGGTGTGTGCA...TGTCCTCACGGTATATTGATGTTCAGGTGGAGCTGGGGTCCATGGGCTAATTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
CDS-3UTR GCA 90 bp TTGGCAAGGAAAAAGATGGGAAGGGAAAATATGGATGCAAAGGGCGATAGCAAGACCCTCCCTTGCCAATaGCACTGGCACCACTCTCTC +
Preference number: 4 (lower is better)
Translates to: LARKKMGRENMDAKGDSKTLPCQ*HWHHSL
Trigger: GAGAGAGTGGTGCCAGTGGCATTGGCAAGGGAGGGT...CTTGCTATCGCCCTTTGCATCCATATTTTCCCTTCCCATCTTTTTCCTTGCCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000591615.1
CDS-3UTR CCA 90 bp TGTCCCCACTGTAGTGTGACCACAAGTGTACTCCAGGGAGAGGGGTACACAGATAGCAGTACATGGCAATaGCCAAAATACTCGTCTCCT +
Preference number: 4 (lower is better)
Translates to: CPHCSVTTSVLQGEGYTDSSTWQ*PKYSSP
Trigger: AGGAGACGAGTATTTTGGCCATTGCCATGTACTGCT...ATCTGTGTACCCCTCTCCCTGGAGTACACTTGTGGTCACACTACAGTGGGGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
CDS-3UTR CCA 90 bp TATGATGTGCCAGAGACCAGGAAATGCCAGAGGGATGTTTGTAACAAAGCTGCCTTACAGAGGCAGAGGTaGCGACAGGGCAGAATCAAG +
Preference number: 4 (lower is better)
Translates to: YDVPETRKCQRDVCNKAALQRQR*RQGRIK
Trigger: CTTGATTCTGCCCTGTCGCCACCTCTGCCTCTGTAA...GGCAGCTTTGTTACAAACATCCCTCTGGCATTTCCTGGTCTCTGGCACATCATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
CDS-3UTR CCA 90 bp TATGATGTGCCAGAGACCAGGAAATGCCAGAGGGATGTTTGTAACAAAGCTGCCGGGGTTAAAGCTGGTTaGGGACAAGGGGCCCAATTT +
Preference number: 4 (lower is better)
Translates to: YDVPETRKCQRDVCNKAAGVKAG*GQGAQF
Trigger: AAATTGGGCCCCTTGTCCCCAACCAGCTTTAACCCC...GGCAGCTTTGTTACAAACATCCCTCTGGCATTTCCTGGTCTCTGGCACATCATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
CDS-3UTR CCA 90 bp CCATTTCTTGTCCTTGAGAAAGGTGCTCCTAGTGCTTGTAGAGGGAAACGCTACGTGTCAGTGCTGATCTaGGAGGATGCCATGGACATG +
Preference number: 4 (lower is better)
Translates to: PFLVLEKGAPSACRGKRYVSVLI*EDAMDM
Trigger: CATGTCCATGGCATCCTCCCAGATCAGCACTGACAC...GTAGCGTTTCCCTCTACAAGCACTAGGAGCACCTTTCTCAAGGACAAGAAATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
CDS-3UTR CCA 90 bp ACCCCAAACTGCAGGTTTCCAATTGGTTATGATGTGCCAGAGACCAGGAAATGCTACGTCCGTGCAGTATaGCTCTCCCTTTCCACAGGA +
Preference number: 4 (lower is better)
Translates to: TPNCRFPIGYDVPETRKCYVRAV*LSLSTG
Trigger: TCCTGTGGAAAGGGAGAGCCATACTGCACGGACGTA...GCATTTCCTGGTCTCTGGCACATCATAACCAATTGGAAACCTGCAGTTTGGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
CDS-3UTR CCA 90 bp AGAAAGGTGCTCCTAGTGCTTGTAGAGGGAAACGCTACGTCCGTGCAGTATGGCCTTGGCACACAGAGGTaGTCAACACATGTGTTTCTT +
Preference number: 4 (lower is better)
Translates to: RKVLLVLVEGNATSVQYGLGTQR*STHVFL
Trigger: AAGAAACACATGTGTTGACCACCTCTGTGTGCCAAG...GCCATACTGCACGGACGTAGCGTTTCCCTCTACAAGCACTAGGAGCACCTTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
CDS-3UTR CCA 90 bp TGGTTGCTACCATTTCTTGTCCTTGAGAAAGGTGCTCCTAGTGCTTGTAGAGGGGACCAGCTCCTTGGATaGAGTATTTCTGTGGGCCAG +
Preference number: 4 (lower is better)
Translates to: WLLPFLVLEKGAPSACRGDQLLG*SISVGQ
Trigger: CTGGCCCACAGAAATACTCCATCCAAGGAGCTGGTC...CCCTCTACAAGCACTAGGAGCACCTTTCTCAAGGACAAGAAATGGTAGCAACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
CDS-3UTR CCA 90 bp CTCAAGGCTCTCCATCACTTCCTTTGGGGACCTGGGCACCAAACTGAGAATCACAGAGGGGTACACAGATaGCACAAGCAGTATACACAT +
Preference number: 4 (lower is better)
Translates to: LKALHHFLWGPGHQTENHRGVHR*HKQYTH
Trigger: ATGTGTATACTGCTTGTGCCATCTGTGTACCCCTCT...GTGATTCTCAGTTTGGTGCCCAGGTCCCCAAAGGAAGTGATGGAGAGCCTTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
CDS-3UTR CCA 90 bp CCAATCCCACTCCCATTAACCTGGGCCATGTCAGTGTCTAAGTTGGCCCTGCCCCTGGAAGAGGGAGAATaGATGGCTAACTTTGAATTT +
Preference number: 4 (lower is better)
Translates to: PIPLPLTWAMSVSKLALPLEEGE*MANFEF
Trigger: AAATTCAAAGTTAGCCATCCATTCTCCCTCTTCCAG...GGGCAGGGCCAACTTAGACACTGACATGGCCCAGGTTAATGGGAGTGGGATTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591615.1
CDS-3UTR CCA 90 bp AAAGGCTCCCTCAACACCAACACTTCTGGAACAATGAAGACCTCAAAAATCAGCCCTTGCCAATGCCACTaGCACCACTCTCTCTCCTCC +
Preference number: 4 (lower is better)
Translates to: KGSLNTNTSGTMKTSKISPCQCH*HHSLSS
Trigger: GGAGGAGAGAGAGTGGTGCCAGTGGCATTGGCAAGG...GCTGATTTTTGAGGTCTTCATTGTTCCAGAAGTGTTGGTGTTGAGGGAGCCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000591615.1
3UTR CAA 72 bp TGCTTGGCACACAGAGGTGGTCAACACATGTGTTTCTaGAAATGTCACCTTAGGATGGAGTTGCAGGCCTCC +
Preference number: 4 (lower is better)
Translates to: CLAHRGGQHMCF*KCHLRMELQAS
Trigger: GGAGGCCTGCAACTCCATCCTAAGGTGACATTTCAAGAAACACATGTGTTGACCACCTCTGTGTGCCAAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
3UTR CAA 72 bp AGGGAAAATATGGATGCAAAGGGCGATAGCAAGACCTaGAGGGAGAGGCTAATGGTGTGTACCCCACACCAT +
Preference number: 4 (lower is better)
Translates to: RENMDAKGDSKT*RERLMVCTPHH
Trigger: ATGGTGTGGGGTACACACCATTAGCCTCTCCCTCAAGGTCTTGCTATCGCCCTTTGCATCCATATTTTCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591615.1
CDS-3UTR TCA 90 bp GAAATTAGCCCATGGACCCCAGCTCCACCTGAACATCAATATACCGTGAGGACAACCTTCAGGATGAGTTaGGTCAAACTTCTCTCCTCC +
Preference number: 4 (lower is better)
Translates to: EISPWTPAPPEHQYTVRTTFRMS*VKLLSS
Trigger: GGAGGAGAGAAGTTTGACTCAACTCATCCTGAAGGT...TGTCCTCACGGTATATTGATGTTCAGGTGGAGCTGGGGTCCATGGGCTAATTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
CDS-3UTR TCA 90 bp TGTCCCCACTGTAGTGTGACCACAAGTGTACTCCAGGGAGAGGGGTACACAGATCATCTGTGTCAAAGGTaGACTCAACATTGTAGTGGA +
Preference number: 4 (lower is better)
Translates to: CPHCSVTTSVLQGEGYTDHLCQR*TQHCSG
Trigger: TCCACTACAATGTTGAGTTCACCTTTGACACAGATG...ATCTGTGTACCCCTCTCCCTGGAGTACACTTGTGGTCACACTACAGTGGGGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
CDS-3UTR TCA 90 bp GAAATTAGCCCATGGACCCCAGCTCCACCTGAACATCAATATACCGTGAGGACAGTCAGATGTCTGGGATaGGATGATGGGGTTAAAGCT +
Preference number: 4 (lower is better)
Translates to: EISPWTPAPPEHQYTVRTVRCLG*DDGVKA
Trigger: AGCTTTAACCCCATCATCTCATCCCAGACATCTGAC...TGTCCTCACGGTATATTGATGTTCAGGTGGAGCTGGGGTCCATGGGCTAATTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
CDS-3UTR TCA 90 bp CAATATACCGTGAGGACATTCCAGAGTCCCTGCAAAAGGTCTCGTGAGCTGCAGGTTTCCAATTGGTTATaGTGTGCCAGAGACCAGGAA +
Preference number: 4 (lower is better)
Translates to: QYTVRTFQSPCKRSRELQVSNWL*CARDQE
Trigger: TTCCTGGTCTCTGGCACATCATAACCAATTGGAAAC...CTGCAGCTCACGAGACCTTTTGCAGGGACTCTGGAATGTCCTCACGGTATATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
CDS-3UTR TCA 90 bp ATTGTGGTTACAGGTTGTAACAGCTGTCACAGGAGGGTAAAAAGTCTCCAGCATAGTTGCAGGCCTCCCTaGATGCACCTGATCAGGAGA +
Preference number: 4 (lower is better)
Translates to: IVVTGCNSCHRRVKSLQHSCRPP*MHLIRR
Trigger: TCTCCTGATCAGGTGCATTCAGGGAGGCCTGCAACT...ATGCTGGAGACTTTTTACCCTCCTGTGACAGCTGTTACAACCTGTAACCACAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
CDS-3UTR TCA 90 bp GTGCCAGAGACCAGGAAATGCCAGAGGGATGTTTGTAACAAAGCTGCCAAACTCGTTGACGTGACTATGTaGCTGTCTCCAGATGAAGGA +
Preference number: 4 (lower is better)
Translates to: VPETRKCQRDVCNKAAKLVDVTM*LSPDEG
Trigger: TCCTTCATCTGGAGACAGTCACATAGTCACGTCAAC...GAGTTTGGCAGCTTTGTTACAAACATCCCTCTGGCATTTCCTGGTCTCTGGCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
CDS-3UTR TCA 90 bp TGGTTGCTACCATTTCTTGTCCTTGAGAAAGGTGCTCCTAGTGCTTGTAGAGGGGGTGAACTGTTGACGTaGCTATGTGACTGTCTCCAG +
Preference number: 4 (lower is better)
Translates to: WLLPFLVLEKGAPSACRGGELLT*LCDCLQ
Trigger: CTGGAGACAGTCACATAGTCACGTCAACAGTTCACC...CCCTCTACAAGCACTAGGAGCACCTTTCTCAAGGACAAGAAATGGTAGCAACCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
CDS-3UTR TCA 90 bp GAAATTAGCCCATGGACCCCAGCTCCACCTGAACATCAATATACCGTGAGGACACTTTGGGTGAACTGTTaGCGTGACTATGTGACTGTC +
Preference number: 4 (lower is better)
Translates to: EISPWTPAPPEHQYTVRTLWVNC*RDYVTV
Trigger: GACAGTCACATAGTCACGTCAACAGTTCACCCAAAG...TGTCCTCACGGTATATTGATGTTCAGGTGGAGCTGGGGTCCATGGGCTAATTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
CDS-3UTR TCA 90 bp GCCATGTCAGTGTCTAAGTTGGCCCTGCCCCATTTACTTTTAGGAGCACACTCTATATGCACAAGGTGCTaGTCATTCTGGAAGAGGGAG +
Preference number: 4 (lower is better)
Translates to: AMSVSKLALPHLLLGAHSICTRC*SFWKRE
Trigger: CTCCCTCTTCCAGAATGATCAGCACCTTGTGCATAT...AGAGTGTGCTCCTAAAAGTAAATGGGGCAGGGCCAACTTAGACACTGACATGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591615.1
CDS-3UTR TCA 90 bp GGACTTTCTAGCAGACATATGCACAAGGTGCTGATCATTCTGGAAGAGGGAGAATCTCTCTCCTCCCAGTaGTGTCTCCTCCTACCTCTA +
Preference number: 4 (lower is better)
Translates to: GLSSRHMHKVLIILEEGESLSSQ*CLLLPL
Trigger: TAGAGGTAGGAGGAGACATCACTGGGAGGAGAGAGA...TTCTCCCTCTTCCAGAATGATCAGCACCTTGTGCATATGTCTGCTAGAAAGTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591615.1
CDS-3UTR GCA 90 bp AGGCTCTCCATCACTTCCTTTGGGGACCTGGGCACCAAACTGAGAATCACTGGTAAAGTTCCATCTGTGTaGTTCTCAAAAGTACCCAGC +
Preference number: 4 (lower is better)
Translates to: RLSITSFGDLGTKLRITGKVPSV*FSKVPS
Trigger: GCTGGGTACTTTTGAGAAGCACACAGATGGAACTTT...ACCAGTGATTCTCAGTTTGGTGCCCAGGTCCCCAAAGGAAGTGATGGAGAGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
CDS-3UTR GCA 90 bp TGGTTGCTACCATTTCTTGTCCTTGAGAAAGGTGCTCCTAGTGCTTGTAGAGGGAACATCATTTCCCTCTaGATCCTGCTCTCCAGCTGG +
Preference number: 4 (lower is better)
Translates to: WLLPFLVLEKGAPSACRGNIISL*ILLSSW
Trigger: CCAGCTGGAGAGCAGGATGCAGAGGGAAATGATGTT...CCCTCTACAAGCACTAGGAGCACCTTTCTCAAGGACAAGAAATGGTAGCAACCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
CDS-3UTR GCA 90 bp ACTCCTCACCCAGTGCTTGGCACACAGAGGTGGTCAACACATGTGTTTCTTGAACAGCTTATTGTCCAGTaGTTTCACGCTTGCGATGTC +
Preference number: 4 (lower is better)
Translates to: TPHPVLGTQRWSTHVFLEQLIVQ*FHACDV
Trigger: GACATCGCAAGCGTGAAAGCACTGGACAATAAGCTG...TTCAAGAAACACATGTGTTGACCACCTCTGTGTGCCAAGCACTGGGTGAGGAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
CDS-3UTR GCA 90 bp CGATCCTCCAGCCCTACCCCAAACTGCAGGTTTCCAATTGGTTATGATGTGCCAAGCCCTACCCCAAACTaGAGGTTTCCAATTGGTTAT +
Preference number: 4 (lower is better)
Translates to: RSSSPTPNCRFPIGYDVPSPTPN*RFPIGY
Trigger: ATAACCAATTGGAAACCTGCAGTTTGGGGTAGGGCT...TGGCACATCATAACCAATTGGAAACCTGCAGTTTGGGGTAGGGCTGGAGGATCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
CDS-3UTR GCA 90 bp CATTTCTTGTCCTTGAGAAAGGTGCTCCTAGTGCTTGTAGAGGGAAACGCTACGCTCCCTGTCACCTGCTaGTTCTGGGCTCATATTTCA +
Preference number: 4 (lower is better)
Translates to: HFLSLRKVLLVLVEGNATLPVTC*FWAHIS
Trigger: TGAAATATGAGCCCAGAAGCAGCAGGTGACAGGGAG...CGTAGCGTTTCCCTCTACAAGCACTAGGAGCACCTTTCTCAAGGACAAGAAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
CDS-3UTR GCA 90 bp TATGATGTGCCAGAGACCAGGAAATGCCAGAGGGATGTTTGTAACAAAGCTGCCCTCCCTGTCACCTGCTaGTTCTGGGCTCATATTTCA +
Preference number: 4 (lower is better)
Translates to: YDVPETRKCQRDVCNKAALPVTC*FWAHIS
Trigger: TGAAATATGAGCCCAGAAGCAGCAGGTGACAGGGAG...GGCAGCTTTGTTACAAACATCCCTCTGGCATTTCCTGGTCTCTGGCACATCATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
CDS-3UTR GCA 90 bp CATTTCTTGTCCTTGAGAAAGGTGCTCCTAGTGCTTGTAGAGGGAAACGCTACGAAGCTCCCTGTCACCTaGTGCTTCTGGGCTCATATT +
Preference number: 4 (lower is better)
Translates to: HFLSLRKVLLVLVEGNATKLPVT*CFWAHI
Trigger: AATATGAGCCCAGAAGCAGCAGGTGACAGGGAGCTT...CGTAGCGTTTCCCTCTACAAGCACTAGGAGCACCTTTCTCAAGGACAAGAAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
CDS-3UTR GCA 90 bp TCTTGTTCTTTCATTTCTCAAGTCCTTTGCTCAGATAAAGGCTCCCTCAACACCACCATCTTGGCTCGCTaGAACCTCCACCTCCTGGGT +
Preference number: 4 (lower is better)
Translates to: SCSFISQVLCSDKGSLNTTILAR*NLHLLG
Trigger: ACCCAGGAGGTGGAGGTTGCAGCGAGCCAAGATGGT...GGTGTTGAGGGAGCCTTTATCTGAGCAAAGGACTTGAGAAATGAAAGAACAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591615.1
CDS-3UTR CCA 90 bp AGGACCAGCTCCTTGGATGGAGTATTTCTGTGGGCCAGAGAGCTAAATGACAGCGAGATTCTCACTTTCTaGAGTCACACCACATTCCTC +
Preference number: 4 (lower is better)
Translates to: RTSSLDGVFLWARELNDSEILTF*SHTTFL
Trigger: GAGGAATGTGGTGTGACTCCAGAAAGTGAGAATCTC...GCTGTCATTTAGCTCTCTGGCCCACAGAAATACTCCATCCAAGGAGCTGGTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
CDS-3UTR CCA 90 bp TGGTTGCTACCATTTCTTGTCCTTGAGAAAGGTGCTCCTAGTGCTTGTAGAGGGCCTGTGCAAGACGACTaGTCAATAGCTCCAGATGAC +
Preference number: 4 (lower is better)
Translates to: WLLPFLVLEKGAPSACRGPVQDD*SIAPDD
Trigger: GTCATCTGGAGCTATTGACCAGTCGTCTTGCACAGG...CCCTCTACAAGCACTAGGAGCACCTTTCTCAAGGACAAGAAATGGTAGCAACCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
CDS-3UTR CCA 90 bp ACCCCAAACTGCAGGTTTCCAATTGGTTATGATGTGCCAGAGACCAGGAAATGCCCTGTGCAAGACGACTaGTCAATAGCTCCAGATGAC +
Preference number: 4 (lower is better)
Translates to: TPNCRFPIGYDVPETRKCPVQDD*SIAPDD
Trigger: GTCATCTGGAGCTATTGACCAGTCGTCTTGCACAGG...GCATTTCCTGGTCTCTGGCACATCATAACCAATTGGAAACCTGCAGTTTGGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
CDS-3UTR CCA 90 bp TTTGGGGACCTGGGCACCAAACTGAGAATCACTGGTCCACATTTCTCTCAACCAGTCACCTGCTGCTTCTaGGCTCATATTTCAGGGAAA +
Preference number: 4 (lower is better)
Translates to: FGDLGTKLRITGPHFSQPVTCCF*AHISGK
Trigger: TTTCCCTGAAATATGAGCCCAGAAGCAGCAGGTGAC...TGGTTGAGAGAAATGTGGACCAGTGATTCTCAGTTTGGTGCCCAGGTCCCCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
CDS-3UTR TCA 90 bp TATGATGTGCCAGAGACCAGGAAATGCCAGAGGGATGTTTGTAACAAAGCTGCCTGTCCTTTCGGATATTaGCCAGGCTTCTCAGAGTCT +
Preference number: 4 (lower is better)
Translates to: YDVPETRKCQRDVCNKAACPFGY*PGFSES
Trigger: AGACTCTGAGAAGCCTGGTCAATATCCGAAAGGACA...GGCAGCTTTGTTACAAACATCCCTCTGGCATTTCCTGGTCTCTGGCACATCATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
CDS-3UTR TCA 90 bp AACTGCAGGTTTCCAATTGGTTATGATGTGCCAGAGACCAGGAAATGCCAGAGGGTCAGATGTCTGGGATaGGATGATGGGGTTAAAGCT +
Preference number: 4 (lower is better)
Translates to: NCRFPIGYDVPETRKCQRVRCLG*DDGVKA
Trigger: AGCTTTAACCCCATCATCTCATCCCAGACATCTGAC...CCTCTGGCATTTCCTGGTCTCTGGCACATCATAACCAATTGGAAACCTGCAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
CDS-3UTR TCA 90 bp TGGTTGCTACCATTTCTTGTCCTTGAGAAAGGTGCTCCTAGTGCTTGTAGAGGGCAGATGACGACAAGGTaGGATTCTCACTTTCTGGAG +
Preference number: 4 (lower is better)
Translates to: WLLPFLVLEKGAPSACRGQMTTR*DSHFLE
Trigger: CTCCAGAAAGTGAGAATCTCACCTTGTCGTCATCTG...CCCTCTACAAGCACTAGGAGCACCTTTCTCAAGGACAAGAAATGGTAGCAACCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
CDS-3UTR TCA 90 bp TATGATGTGCCAGAGACCAGGAAATGCCAGAGGGATGTTTGTAACAAAGCTGCCCAGATGACGACAAGGTaGGATTCTCACTTTCTGGAG +
Preference number: 4 (lower is better)
Translates to: YDVPETRKCQRDVCNKAAQMTTR*DSHFLE
Trigger: CTCCAGAAAGTGAGAATCTCACCTTGTCGTCATCTG...GGCAGCTTTGTTACAAACATCCCTCTGGCATTTCCTGGTCTCTGGCACATCATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
CDS-3UTR TCA 90 bp TATGATGTGCCAGAGACCAGGAAATGCCAGAGGGATGTTTGTAACAAAGCTGCCGTCAATAGCTCCAGATaGCGACAAGGTGAGATTCTC +
Preference number: 4 (lower is better)
Translates to: YDVPETRKCQRDVCNKAAVNSSR*RQGEIL
Trigger: GAGAATCTCACCTTGTCGTCATCTGGAGCTATTGAC...GGCAGCTTTGTTACAAACATCCCTCTGGCATTTCCTGGTCTCTGGCACATCATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
CDS-3UTR TCA 90 bp AACTGCAGGTTTCCAATTGGTTATGATGTGCCAGAGACCAGGAAATGCCAGAGGGTCAATAGCTCCAGATaGCGACAAGGTGAGATTCTC +
Preference number: 4 (lower is better)
Translates to: NCRFPIGYDVPETRKCQRVNSSR*RQGEIL
Trigger: GAGAATCTCACCTTGTCGTCATCTGGAGCTATTGAC...CCTCTGGCATTTCCTGGTCTCTGGCACATCATAACCAATTGGAAACCTGCAGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
CDS-3UTR TCA 90 bp GTGCCAGAGACCAGGAAATGCCAGAGGGATGTTTGTAACAAAGCTGCCAAACTCAACATCAATATACCGTaGGGACATTCCAGAGTCCCT +
Preference number: 4 (lower is better)
Translates to: VPETRKCQRDVCNKAAKLNINIP*GHSRVP
Trigger: AGGGACTCTGGAATGTCCTCACGGTATATTGATGTT...GAGTTTGGCAGCTTTGTTACAAACATCCCTCTGGCATTTCCTGGTCTCTGGCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
CDS-3UTR TCA 90 bp AGGCTCTCCATCACTTCCTTTGGGGACCTGGGCACCAAACTGAGAATCACTGGTAACACATGTGTTTCTTaGAATGTCACCTTAGGATGG +
Preference number: 4 (lower is better)
Translates to: RLSITSFGDLGTKLRITGNTCVS*NVTLGW
Trigger: CCATCCTAAGGTGACATTTCAAGAAACACATGTGTT...ACCAGTGATTCTCAGTTTGGTGCCCAGGTCCCCAAAGGAAGTGATGGAGAGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
CDS-3UTR TCA 90 bp ACTCCTCACCCAGTGCTTGGCACACAGAGGTGGTCAACACATGTGTTTCTTGAATGGCTACTGTTTACCTaGATCTCCTTCATCTCAGCT +
Preference number: 4 (lower is better)
Translates to: TPHPVLGTQRWSTHVFLEWLLFT*ISFISA
Trigger: AGCTGAGATGAAGGAGATTCAGGTAAACAGTAGCCA...TTCAAGAAACACATGTGTTGACCACCTCTGTGTGCCAAGCACTGGGTGAGGAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
CDS-3UTR GCA 90 bp CCATTTCTTGTCCTTGAGAAAGGTGCTCCTAGTGCTTGTAGAGGGAAACGCTACCCAGAGACCAGGAAATaGCAGAGGGATGTTTGTAAC +
Preference number: 4 (lower is better)
Translates to: PFLVLEKGAPSACRGKRYPETRK*QRDVCN
Trigger: GTTACAAACATCCCTCTGGCATTTCCTGGTCTCTGG...GTAGCGTTTCCCTCTACAAGCACTAGGAGCACCTTTCTCAAGGACAAGAAATGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
CDS-3UTR GCA 90 bp AGACTCCAGGAGCTCTTCCAGTCCTCTAGCAACAAGAGATCCCATACAACCAAGTACAACCAAGGAGGCTaGAGTTTGTCTTCTAGTGCA +
Preference number: 4 (lower is better)
Translates to: RLQELFQSSSNKRSHTTKYNQGG*SLSSSA
Trigger: TGCACTAGAAGACAAACTGCAGCCTCCTTGGTTGTA...CTTGGTTGTATGGGATCTCTTGTTGCTAGAGGACTGGAAGAGCTCCTGGAGTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592271.1
CDS-3UTR CCA 90 bp GAAATTAGCCCATGGACCCCAGCTCCACCTGAACATCAATATACCGTGAGGACAAGAGGTGAGGGATTGTaGTTACAGGTTGTAACAGCT +
Preference number: 4 (lower is better)
Translates to: EISPWTPAPPEHQYTVRTRGEGL*LQVVTA
Trigger: AGCTGTTACAACCTGTAACCACAATCCCTCACCTCT...TGTCCTCACGGTATATTGATGTTCAGGTGGAGCTGGGGTCCATGGGCTAATTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
CDS-3UTR CCA 90 bp CTCAAGGCTCTCCATCACTTCCTTTGGGGACCTGGGCACCAAACTGAGAATCACGGAAATCATCTTAACTaGGGGATTCTCAGATTCAAG +
Preference number: 4 (lower is better)
Translates to: LKALHHFLWGPGHQTENHGNHLN*GILRFK
Trigger: CTTGAATCTGAGAATCCCCCAGTTAAGATGATTTCC...GTGATTCTCAGTTTGGTGCCCAGGTCCCCAAAGGAAGTGATGGAGAGCCTTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
CDS-3UTR CCA 90 bp ACTCCTCACCCAGTGCTTGGCACACAGAGGTGGTCAACACATGTGTTTCTTGAAGATGGAGTATTTCTGTaGGCCAGAGAGCTAAATGAC +
Preference number: 4 (lower is better)
Translates to: TPHPVLGTQRWSTHVFLEDGVFL*ARELND
Trigger: GTCATTTAGCTCTCTGGCCCACAGAAATACTCCATC...TTCAAGAAACACATGTGTTGACCACCTCTGTGTGCCAAGCACTGGGTGAGGAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
CDS-3UTR CCA 90 bp GAGATCCCATACAACCAAGGAGGCTGCAGTTTGTCTTCTAGTGCATCTCTCTCACAGCCATACCACAACTaGTCTGTTCCCCAGAAAGTT +
Preference number: 4 (lower is better)
Translates to: EIPYNQGGCSLSSSASLSQPYHN*SVPQKV
Trigger: AACTTTCTGGGGAACAGACCAGTTGTGGTATGGCTG...TGAGAGAGATGCACTAGAAGACAAACTGCAGCCTCCTTGGTTGTATGGGATCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592271.1
CDS-3UTR CCA 90 bp GGACTTTCTAGCAGACATATGCACAAGGTGCTGATCATTCTGGAAGAGGGAGAAGCACATGGTAGGGGCTaGGACTTTCTAGCAGACATA +
Preference number: 4 (lower is better)
Translates to: GLSSRHMHKVLIILEEGEAHGRG*DFLADI
Trigger: TATGTCTGCTAGAAAGTCCCAGCCCCTACCATGTGC...TTCTCCCTCTTCCAGAATGATCAGCACCTTGTGCATATGTCTGCTAGAAAGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591615.1
CDS-3UTR CCA 90 bp GGACTTTCTAGCAGACATATGCACAAGGTGCTGATCATTCTGGAAGAGGGAGAACCACTCCCATTAACCTaGGCCATGTCAGTGTCTAAG +
Preference number: 4 (lower is better)
Translates to: GLSSRHMHKVLIILEEGEPLPLT*AMSVSK
Trigger: CTTAGACACTGACATGGCCCAGGTTAATGGGAGTGG...TTCTCCCTCTTCCAGAATGATCAGCACCTTGTGCATATGTCTGCTAGAAAGTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591615.1
CDS-3UTR TCA 90 bp AACTGCAGGTTTCCAATTGGTTATGATGTGCCAGAGACCAGGAAATGCCAGAGGTGGTGGAATATTCTCTaGGGATGGATGCTCTTCAGA +
Preference number: 4 (lower is better)
Translates to: NCRFPIGYDVPETRKCQRWWNIL*GWMLFR
Trigger: TCTGAAGAGCATCCATCCTCAGAGAATATTCCACCA...CCTCTGGCATTTCCTGGTCTCTGGCACATCATAACCAATTGGAAACCTGCAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
CDS-3UTR TCA 90 bp CCTGAACATCAATATACCGTGAGGACATTCCAGAGTCCCTGCAAAAGGTCTCGTTGGTGGAATATTCTCTaGGGATGGATGCTCTTCAGA +
Preference number: 4 (lower is better)
Translates to: PEHQYTVRTFQSPCKRSRWWNIL*GWMLFR
Trigger: TCTGAAGAGCATCCATCCTCAGAGAATATTCCACCA...ACGAGACCTTTTGCAGGGACTCTGGAATGTCCTCACGGTATATTGATGTTCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
CDS-3UTR TCA 90 bp CCATTTCTTGTCCTTGAGAAAGGTGCTCCTAGTGCTTGTAGAGGGAAACGCTACAACATCAATATACCGTaGGGACATTCCAGAGTCCCT +
Preference number: 4 (lower is better)
Translates to: PFLVLEKGAPSACRGKRYNINIP*GHSRVP
Trigger: AGGGACTCTGGAATGTCCTCACGGTATATTGATGTT...GTAGCGTTTCCCTCTACAAGCACTAGGAGCACCTTTCTCAAGGACAAGAAATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
CDS-3UTR TCA 90 bp GGACTTTCTAGCAGACATATGCACAAGGTGCTGATCATTCTGGAAGAGGGAGAAGACATAGCCTGTCGCTaGTTTTATATCCCACTCTCC +
Preference number: 4 (lower is better)
Translates to: GLSSRHMHKVLIILEEGEDIACR*FYIPLS
Trigger: GGAGAGTGGGATATAAAATCAGCGACAGGCTATGTC...TTCTCCCTCTTCCAGAATGATCAGCACCTTGTGCATATGTCTGCTAGAAAGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591615.1
CDS-3UTR GCA 90 bp GTGCCAGAGACCAGGAAATGCCAGAGGGATGTTTGTAACAAAGCTGCCAAACTCAAAGTTCCATCTGTGTaGTTCTCAAAAGTACCCAGC +
Preference number: 4 (lower is better)
Translates to: VPETRKCQRDVCNKAAKLKVPSV*FSKVPS
Trigger: GCTGGGTACTTTTGAGAAGCACACAGATGGAACTTT...GAGTTTGGCAGCTTTGTTACAAACATCCCTCTGGCATTTCCTGGTCTCTGGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
CDS-3UTR GCA 90 bp TATGATGTGCCAGAGACCAGGAAATGCCAGAGGGATGTTTGTAACAAAGCTGCCTTCTCTGAGGATGGATaGTCTTCAGAGTCAGATGTC +
Preference number: 4 (lower is better)
Translates to: YDVPETRKCQRDVCNKAAFSEDG*SSESDV
Trigger: GACATCTGACTCTGAAGAGCATCCATCCTCAGAGAA...GGCAGCTTTGTTACAAACATCCCTCTGGCATTTCCTGGTCTCTGGCACATCATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
CDS-3UTR GCA 90 bp TGGTTGCTACCATTTCTTGTCCTTGAGAAAGGTGCTCCTAGTGCTTGTAGAGGGTTCTCTGAGGATGGATaGTCTTCAGAGTCAGATGTC +
Preference number: 4 (lower is better)
Translates to: WLLPFLVLEKGAPSACRGFSEDG*SSESDV
Trigger: GACATCTGACTCTGAAGAGCATCCATCCTCAGAGAA...CCCTCTACAAGCACTAGGAGCACCTTTCTCAAGGACAAGAAATGGTAGCAACCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
CDS-3UTR GCA 90 bp CCTGAACATCAATATACCGTGAGGACATTCCAGAGTCCCTGCAAAAGGTCTCGTTTCTCTGAGGATGGATaGTCTTCAGAGTCAGATGTC +
Preference number: 4 (lower is better)
Translates to: PEHQYTVRTFQSPCKRSRFSEDG*SSESDV
Trigger: GACATCTGACTCTGAAGAGCATCCATCCTCAGAGAA...ACGAGACCTTTTGCAGGGACTCTGGAATGTCCTCACGGTATATTGATGTTCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
CDS-3UTR GCA 90 bp AACTGCAGGTTTCCAATTGGTTATGATGTGCCAGAGACCAGGAAATGCCAGAGGTCATCTTCCTCTTCATaGAGCACGGAAGAGTTTTGG +
Preference number: 4 (lower is better)
Translates to: NCRFPIGYDVPETRKCQRSSSSS*STEEFW
Trigger: CCAAAACTCTTCCGTGCTGCATGAAGAGGAAGATGA...CCTCTGGCATTTCCTGGTCTCTGGCACATCATAACCAATTGGAAACCTGCAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
CDS-3UTR GCA 90 bp CATTTCTTGTCCTTGAGAAAGGTGCTCCTAGTGCTTGTAGAGGGAAACGCTACGTCATCTTCCTCTTCATaGAGCACGGAAGAGTTTTGG +
Preference number: 4 (lower is better)
Translates to: HFLSLRKVLLVLVEGNATSSSSS*STEEFW
Trigger: CCAAAACTCTTCCGTGCTGCATGAAGAGGAAGATGA...CGTAGCGTTTCCCTCTACAAGCACTAGGAGCACCTTTCTCAAGGACAAGAAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
CDS-3UTR GCA 90 bp ATTGTGGTTACAGGTTGTAACAGCTGTCACAGGAGGGTAAAAAGTCTCCAGCATGACTCGCTGCAGGAATaGTCATCTTCCTCTTCATGC +
Preference number: 4 (lower is better)
Translates to: IVVTGCNSCHRRVKSLQHDSLQE*SSSSSC
Trigger: GCATGAAGAGGAAGATGAGCATTCCTGCAGCGAGTC...ATGCTGGAGACTTTTTACCCTCCTGTGACAGCTGTTACAACCTGTAACCACAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
CDS-3UTR GCA 90 bp ATTGTGGTTACAGGTTGTAACAGCTGTCACAGGAGGGTAAAAAGTCTCCAGCATAACATCATTTCCCTCTaGATCCTGCTCTCCAGCTGG +
Preference number: 4 (lower is better)
Translates to: IVVTGCNSCHRRVKSLQHNIISL*ILLSSW
Trigger: CCAGCTGGAGAGCAGGATGCAGAGGGAAATGATGTT...ATGCTGGAGACTTTTTACCCTCCTGTGACAGCTGTTACAACCTGTAACCACAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
CDS-3UTR GCA 90 bp GTGCCAGAGACCAGGAAATGCCAGAGGGATGTTTGTAACAAAGCTGCCAAACTCCAGTGCTTTCACGCTTaGGATGTCAAAGTCATTGTT +
Preference number: 4 (lower is better)
Translates to: VPETRKCQRDVCNKAAKLQCFHA*DVKVIV
Trigger: AACAATGACTTTGACATCGCAAGCGTGAAAGCACTG...GAGTTTGGCAGCTTTGTTACAAACATCCCTCTGGCATTTCCTGGTCTCTGGCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
CDS-3UTR GCA 90 bp TATGATGTGCCAGAGACCAGGAAATGCCAGAGGGATGTTTGTAACAAAGCTGCCAAAGGTCTCGTGAGCTaGAGTTCATTGAGTGGCTTT +
Preference number: 4 (lower is better)
Translates to: YDVPETRKCQRDVCNKAAKGLVS*SSLSGF
Trigger: AAAGCCACTCAATGAACTGCAGCTCACGAGACCTTT...GGCAGCTTTGTTACAAACATCCCTCTGGCATTTCCTGGTCTCTGGCACATCATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
CDS-3UTR GCA 90 bp ACCCCAAACTGCAGGTTTCCAATTGGTTATGATGTGCCAGAGACCAGGAAATGCAAAGGTCTCGTGAGCTaGAGTTCATTGAGTGGCTTT +
Preference number: 4 (lower is better)
Translates to: TPNCRFPIGYDVPETRKCKGLVS*SSLSGF
Trigger: AAAGCCACTCAATGAACTGCAGCTCACGAGACCTTT...GCATTTCCTGGTCTCTGGCACATCATAACCAATTGGAAACCTGCAGTTTGGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
CDS-3UTR GCA 90 bp AACTGCAGGTTTCCAATTGGTTATGATGTGCCAGAGACCAGGAAATGCCAGAGGAAAGGTCTCGTGAGCTaGAGTTCATTGAGTGGCTTT +
Preference number: 4 (lower is better)
Translates to: NCRFPIGYDVPETRKCQRKGLVS*SSLSGF
Trigger: AAAGCCACTCAATGAACTGCAGCTCACGAGACCTTT...CCTCTGGCATTTCCTGGTCTCTGGCACATCATAACCAATTGGAAACCTGCAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
CDS-3UTR GCA 90 bp GTCCTTGAGAAAGGTGCTCCTAGTGCTTGTAGAGGGAAACGCTACGTCCGTGCAAATGGTAAAGTCTACTaGAGTTTTTCAGAGAGGGTT +
Preference number: 4 (lower is better)
Translates to: VLEKGAPSACRGKRYVRANGKVY*SFSERV
Trigger: AACCCTCTCTGAAAAACTGCAGTAGACTTTACCATT...TGCACGGACGTAGCGTTTCCCTCTACAAGCACTAGGAGCACCTTTCTCAAGGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
CDS-3UTR CCA 90 bp ACTCCTCACCCAGTGCTTGGCACACAGAGGTGGTCAACACATGTGTTTCTTGAAGTAAGGAAACACAACTaGTCTGTTCCCCAGAAAGTT +
Preference number: 4 (lower is better)
Translates to: TPHPVLGTQRWSTHVFLEVRKHN*SVPQKV
Trigger: AACTTTCTGGGGAACAGACCAGTTGTGTTTCCTTAC...TTCAAGAAACACATGTGTTGACCACCTCTGTGTGCCAAGCACTGGGTGAGGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
CDS-3UTR CCA 90 bp CATTCCAGAGTCCCTGCAAAAGGTCTCGTGAGCTGCAGTTCATTGAGTGGCTTTCTTTGGGAATGTAGCTaGCAATACCATTCTGGAACT +
Preference number: 4 (lower is better)
Translates to: HSRVPAKGLVSCSSLSGFLWECS*QYHSGT
Trigger: AGTTCCAGAATGGTATTGCCAGCTACATTCCCAAAG...AAAGCCACTCAATGAACTGCAGCTCACGAGACCTTTTGCAGGGACTCTGGAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
CDS-3UTR CCA 90 bp CCTGAACATCAATATACCGTGAGGACATTCCAGAGTCCCTGCAAAAGGTCTCGTAGCAGTACATGGCAATaGCCAAAATACTCGTCTCCT +
Preference number: 4 (lower is better)
Translates to: PEHQYTVRTFQSPCKRSRSSTWQ*PKYSSP
Trigger: AGGAGACGAGTATTTTGGCCATTGCCATGTACTGCT...ACGAGACCTTTTGCAGGGACTCTGGAATGTCCTCACGGTATATTGATGTTCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
CDS-3UTR CCA 90 bp CCTGAACATCAATATACCGTGAGGACATTCCAGAGTCCCTGCAAAAGGTCTCGTGAGATTCTCACTTTCTaGAGTCACACCACATTCCTC +
Preference number: 4 (lower is better)
Translates to: PEHQYTVRTFQSPCKRSREILTF*SHTTFL
Trigger: GAGGAATGTGGTGTGACTCCAGAAAGTGAGAATCTC...ACGAGACCTTTTGCAGGGACTCTGGAATGTCCTCACGGTATATTGATGTTCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
CDS-3UTR CCA 90 bp ACCCCAAACTGCAGGTTTCCAATTGGTTATGATGTGCCAGAGACCAGGAAATGCAGAGGTGAGGGATTGTaGTTACAGGTTGTAACAGCT +
Preference number: 4 (lower is better)
Translates to: TPNCRFPIGYDVPETRKCRGEGL*LQVVTA
Trigger: AGCTGTTACAACCTGTAACCACAATCCCTCACCTCT...GCATTTCCTGGTCTCTGGCACATCATAACCAATTGGAAACCTGCAGTTTGGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
CDS-3UTR CCA 90 bp CAATATACCGTGAGGACATTCCAGAGTCCCTGCAAAAGGTCTCGTGAGCTGCAGCTTCAACCAACCTTTTaGTTGCTACCATTTCTTGTC +
Preference number: 4 (lower is better)
Translates to: QYTVRTFQSPCKRSRELQLQPTF*LLPFLV
Trigger: GACAAGAAATGGTAGCAACCAAAAGGTTGGTTGAAG...CTGCAGCTCACGAGACCTTTTGCAGGGACTCTGGAATGTCCTCACGGTATATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
CDS-3UTR CCA 90 bp CGATCCTCCAGCCCTACCCCAAACTGCAGGTTTCCAATTGGTTATGATGTGCCAGGAAATCATCTTAACTaGGGGATTCTCAGATTCAAG +
Preference number: 4 (lower is better)
Translates to: RSSSPTPNCRFPIGYDVPGNHLN*GILRFK
Trigger: CTTGAATCTGAGAATCCCCCAGTTAAGATGATTTCC...TGGCACATCATAACCAATTGGAAACCTGCAGTTTGGGGTAGGGCTGGAGGATCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
3UTR CAA 72 bp CAACAAGAGATCCCATACAACCAAGGAGGCTGCAGTTaGTCTTCTAGTGCATCTCTCTCAACTCAGACCAAG +
Preference number: 4 (lower is better)
Translates to: QQEIPYNQGGCS*SSSASLSTQTK
Trigger: CTTGGTCTGAGTTGAGAGAGATGCACTAGAAGACAAACTGCAGCCTCCTTGGTTGTATGGGATCTCTTGTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592271.1
CDS-3UTR TCA 90 bp AACTGCAGGTTTCCAATTGGTTATGATGTGCCAGAGACCAGGAAATGCCAGAGGCATCTGTGTCAAAGGTaGACTCAACATTGTAGTGGA +
Preference number: 4 (lower is better)
Translates to: NCRFPIGYDVPETRKCQRHLCQR*TQHCSG
Trigger: TCCACTACAATGTTGAGTTCACCTTTGACACAGATG...CCTCTGGCATTTCCTGGTCTCTGGCACATCATAACCAATTGGAAACCTGCAGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
CDS-3UTR TCA 90 bp CAAGAGATCCCATACAACCAAGGAGGCTGCAGTTTGTCTTCTAGTGCATCTCTCCAAGTAGGAGTAAACTaGTTACAGCCATACCACAAC +
Preference number: 4 (lower is better)
Translates to: QEIPYNQGGCSLSSSASLQVGVN*LQPYHN
Trigger: GTTGTGGTATGGCTGTAATCAGTTTACTCCTACTTG...GAGAGATGCACTAGAAGACAAACTGCAGCCTCCTTGGTTGTATGGGATCTCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592271.1
CDS-3UTR GCA 90 bp CATTTCTTGTCCTTGAGAAAGGTGCTCCTAGTGCTTGTAGAGGGAAACGCTACGAAAGTTCCATCTGTGTaGTTCTCAAAAGTACCCAGC +
Preference number: 4 (lower is better)
Translates to: HFLSLRKVLLVLVEGNATKVPSV*FSKVPS
Trigger: GCTGGGTACTTTTGAGAAGCACACAGATGGAACTTT...CGTAGCGTTTCCCTCTACAAGCACTAGGAGCACCTTTCTCAAGGACAAGAAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
CDS-3UTR GCA 90 bp ACCCCAAACTGCAGGTTTCCAATTGGTTATGATGTGCCAGAGACCAGGAAATGCCAGTGCTTTCACGCTTaGGATGTCAAAGTCATTGTT +
Preference number: 4 (lower is better)
Translates to: TPNCRFPIGYDVPETRKCQCFHA*DVKVIV
Trigger: AACAATGACTTTGACATCGCAAGCGTGAAAGCACTG...GCATTTCCTGGTCTCTGGCACATCATAACCAATTGGAAACCTGCAGTTTGGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
CDS-3UTR GCA 90 bp CCATTTCTTGTCCTTGAGAAAGGTGCTCCTAGTGCTTGTAGAGGGAAACGCTACCAGTGCTTTCACGCTTaGGATGTCAAAGTCATTGTT +
Preference number: 4 (lower is better)
Translates to: PFLVLEKGAPSACRGKRYQCFHA*DVKVIV
Trigger: AACAATGACTTTGACATCGCAAGCGTGAAAGCACTG...GTAGCGTTTCCCTCTACAAGCACTAGGAGCACCTTTCTCAAGGACAAGAAATGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
CDS-3UTR GCA 90 bp ATTGTGGTTACAGGTTGTAACAGCTGTCACAGGAGGGTAAAAAGTCTCCAGCATCCAGAGACCAGGAAATaGCAGAGGGATGTTTGTAAC +
Preference number: 4 (lower is better)
Translates to: IVVTGCNSCHRRVKSLQHPETRK*QRDVCN
Trigger: GTTACAAACATCCCTCTGGCATTTCCTGGTCTCTGG...ATGCTGGAGACTTTTTACCCTCCTGTGACAGCTGTTACAACCTGTAACCACAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
CDS-3UTR GCA 90 bp CATTTCTTGTCCTTGAGAAAGGTGCTCCTAGTGCTTGTAGAGGGAAACGCTACGCCTGATCAGGAGAAATaGTCCTTAAGGGAAATCATC +
Preference number: 4 (lower is better)
Translates to: HFLSLRKVLLVLVEGNATPDQEK*SLREII
Trigger: GATGATTTCCCTTAAGGAGCATTTCTCCTGATCAGG...CGTAGCGTTTCCCTCTACAAGCACTAGGAGCACCTTTCTCAAGGACAAGAAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
CDS-3UTR GCA 90 bp CAATATACCGTGAGGACATTCCAGAGTCCCTGCAAAAGGTCTCGTGAGCTGCAGAATGGTAAAGTCTACTaGAGTTTTTCAGAGAGGGTT +
Preference number: 4 (lower is better)
Translates to: QYTVRTFQSPCKRSRELQNGKVY*SFSERV
Trigger: AACCCTCTCTGAAAAACTGCAGTAGACTTTACCATT...CTGCAGCTCACGAGACCTTTTGCAGGGACTCTGGAATGTCCTCACGGTATATTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
CDS-3UTR CCA 90 bp CCATTTCTTGTCCTTGAGAAAGGTGCTCCTAGTGCTTGTAGAGGGAAACGCTACCTTTGGGAATGTAGCTaGCAATACCATTCTGGAACT +
Preference number: 4 (lower is better)
Translates to: PFLVLEKGAPSACRGKRYLWECS*QYHSGT
Trigger: AGTTCCAGAATGGTATTGCCAGCTACATTCCCAAAG...GTAGCGTTTCCCTCTACAAGCACTAGGAGCACCTTTCTCAAGGACAAGAAATGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
CDS-3UTR CCA 90 bp ATTGTGGTTACAGGTTGTAACAGCTGTCACAGGAGGGTAAAAAGTCTCCAGCATGTACCCAGCAGTACATaGCAATGGCCAAAATACTCG +
Preference number: 4 (lower is better)
Translates to: IVVTGCNSCHRRVKSLQHVPSST*QWPKYS
Trigger: CGAGTATTTTGGCCATTGCCATGTACTGCTGGGTAC...ATGCTGGAGACTTTTTACCCTCCTGTGACAGCTGTTACAACCTGTAACCACAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
CDS-3UTR CCA 90 bp ACTCCTCACCCAGTGCTTGGCACACAGAGGTGGTCAACACATGTGTTTCTTGAACTTCAACCAACCTTTTaGTTGCTACCATTTCTTGTC +
Preference number: 4 (lower is better)
Translates to: TPHPVLGTQRWSTHVFLELQPTF*LLPFLV
Trigger: GACAAGAAATGGTAGCAACCAAAAGGTTGGTTGAAG...TTCAAGAAACACATGTGTTGACCACCTCTGTGTGCCAAGCACTGGGTGAGGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
CDS-3UTR CCA 90 bp CATTCCAGAGTCCCTGCAAAAGGTCTCGTGAGCTGCAGTTCATTGAGTGGCTTTCTTCAACCAACCTTTTaGTTGCTACCATTTCTTGTC +
Preference number: 4 (lower is better)
Translates to: HSRVPAKGLVSCSSLSGFLQPTF*LLPFLV
Trigger: GACAAGAAATGGTAGCAACCAAAAGGTTGGTTGAAG...AAAGCCACTCAATGAACTGCAGCTCACGAGACCTTTTGCAGGGACTCTGGAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
CDS-3UTR CCA 90 bp TATGATGTGCCAGAGACCAGGAAATGCCAGAGGGATGTTTGTAACAAAGCTGCCAGGGAAATCAGGAAGTaGGGTTATTGCTCAGCTTAT +
Preference number: 4 (lower is better)
Translates to: YDVPETRKCQRDVCNKAAREIRK*GYCSAY
Trigger: ATAAGCTGAGCAATAACCCCACTTCCTGATTTCCCT...GGCAGCTTTGTTACAAACATCCCTCTGGCATTTCCTGGTCTCTGGCACATCATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
CDS-3UTR CCA 90 bp GGACTTTCTAGCAGACATATGCACAAGGTGCTGATCATTCTGGAAGAGGGAGAACTACCTCTACAAGAGTaGAAAGAAAAGTGCTGGCAC +
Preference number: 4 (lower is better)
Translates to: GLSSRHMHKVLIILEEGELPLQE*KEKCWH
Trigger: GTGCCAGCACTTTTCTTTCCACTCTTGTAGAGGTAG...TTCTCCCTCTTCCAGAATGATCAGCACCTTGTGCATATGTCTGCTAGAAAGTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591615.1
CDS-3UTR CCA 90 bp GGACTTTCTAGCAGACATATGCACAAGGTGCTGATCATTCTGGAAGAGGGAGAATGTCAGTGTCTAAGTTaGCCCTGCCCCATTTACTTT +
Preference number: 4 (lower is better)
Translates to: GLSSRHMHKVLIILEEGECQCLS*PCPIYF
Trigger: AAAGTAAATGGGGCAGGGCCAACTTAGACACTGACA...TTCTCCCTCTTCCAGAATGATCAGCACCTTGTGCATATGTCTGCTAGAAAGTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591615.1
3UTR CAA 72 bp GGGCTCATATTTCAGGGAAATCAGGAAGTGGGGTTATaGCTCAGCTTATGCATCTTAACTATGAAAGGGGCG +
Preference number: 4 (lower is better)
Translates to: GLIFQGNQEVGL*LSLCILTMKGA
Trigger: CGCCCCTTTCATAGTTAAGATGCATAAGCTGAGCAATAACCCCACTTCCTGATTTCCCTGAAATATGAGCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
CDS-3UTR GCA 90 bp TTTGGGGACCTGGGCACCAAACTGAGAATCACTGGTCCACATTTCTCTCAACCAGCAATCCATAAATATTaGATTCTTGATGTCCCCACT +
Preference number: 4 (lower is better)
Translates to: FGDLGTKLRITGPHFSQPAIHKY*ILDVPT
Trigger: AGTGGGGACATCAAGAATGCAATATTTATGGATTGC...TGGTTGAGAGAAATGTGGACCAGTGATTCTCAGTTTGGTGCCCAGGTCCCCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
CDS-3UTR GCA 90 bp TCCAGGAGCTCTTCCAGTCCTCTAGCAACAAGAGATCCCATACAACCAAGGAGGAGTAAAAACAGTCCTTaGCTTATGAAACTTACGTTC +
Preference number: 4 (lower is better)
Translates to: SRSSSSPLATRDPIQPRRSKNSP*LMKLTF
Trigger: GAACGTAAGTTTCATAAGGCAAGGACTGTTTTTACT...CCTCCTTGGTTGTATGGGATCTCTTGTTGCTAGAGGACTGGAAGAGCTCCTGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000592271.1
CDS-3UTR CCA 90 bp AAAGGCTCCCTCAACACCAACACTTCTGGAACAATGAAGACCTCAAAAATCAGCAGCAGTACATGGCAATaGCCAAAATACTCGTCTCCT +
Preference number: 4 (lower is better)
Translates to: KGSLNTNTSGTMKTSKISSSTWQ*PKYSSP
Trigger: AGGAGACGAGTATTTTGGCCATTGCCATGTACTGCT...GCTGATTTTTGAGGTCTTCATTGTTCCAGAAGTGTTGGTGTTGAGGGAGCCTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000591615.1
CDS-3UTR CCA 90 bp ATTGTGGTTACAGGTTGTAACAGCTGTCACAGGAGGGTAAAAAGTCTCCAGCATGAGATTCTCACTTTCTaGAGTCACACCACATTCCTC +
Preference number: 4 (lower is better)
Translates to: IVVTGCNSCHRRVKSLQHEILTF*SHTTFL
Trigger: GAGGAATGTGGTGTGACTCCAGAAAGTGAGAATCTC...ATGCTGGAGACTTTTTACCCTCCTGTGACAGCTGTTACAACCTGTAACCACAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
CDS-3UTR CCA 90 bp ATTGTGGTTACAGGTTGTAACAGCTGTCACAGGAGGGTAAAAAGTCTCCAGCATGATGGAGTATTTCTGTaGGCCAGAGAGCTAAATGAC +
Preference number: 4 (lower is better)
Translates to: IVVTGCNSCHRRVKSLQHDGVFL*ARELND
Trigger: GTCATTTAGCTCTCTGGCCCACAGAAATACTCCATC...ATGCTGGAGACTTTTTACCCTCCTGTGACAGCTGTTACAACCTGTAACCACAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
CDS-3UTR CCA 90 bp AAAGGCTCCCTCAACACCAACACTTCTGGAACAATGAAGACCTCAAAAATCAGCTGGGAAGGGAAAATATaGATGCAAAGGGCGATAGCA +
Preference number: 4 (lower is better)
Translates to: KGSLNTNTSGTMKTSKISWEGKI*MQRAIA
Trigger: TGCTATCGCCCTTTGCATCCATATTTTCCCTTCCCA...GCTGATTTTTGAGGTCTTCATTGTTCCAGAAGTGTTGGTGTTGAGGGAGCCTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000591615.1
3UTR CAA 72 bp TTCAACCAACCTTTTGGTTGCTACCATTTCTTGTCCTaGAGAAAGGTGCTCCTAGTGCTTGTAGAGGGAAAC +
Preference number: 4 (lower is better)
Translates to: FNQPFGCYHFLS*RKVLLVLVEGN
Trigger: GTTTCCCTCTACAAGCACTAGGAGCACCTTTCTCAAGGACAAGAAATGGTAGCAACCAAAAGGTTGGTTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
CDS-3UTR GCA 90 bp AAAGGCTCCCTCAACACCAACACTTCTGGAACAATGAAGACCTCAAAAATCAGCAAAGTTCCATCTGTGTaGTTCTCAAAAGTACCCAGC +
Preference number: 4 (lower is better)
Translates to: KGSLNTNTSGTMKTSKISKVPSV*FSKVPS
Trigger: GCTGGGTACTTTTGAGAAGCACACAGATGGAACTTT...GCTGATTTTTGAGGTCTTCATTGTTCCAGAAGTGTTGGTGTTGAGGGAGCCTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000591615.1
CDS-3UTR GCA 90 bp TATGATGTGCCAGAGACCAGGAAATGCCAGAGGGATGTTTGTAACAAAGCTGCCGCAATCCATAAATATTaGATTCTTGATGTCCCCACT +
Preference number: 4 (lower is better)
Translates to: YDVPETRKCQRDVCNKAAAIHKY*ILDVPT
Trigger: AGTGGGGACATCAAGAATGCAATATTTATGGATTGC...GGCAGCTTTGTTACAAACATCCCTCTGGCATTTCCTGGTCTCTGGCACATCATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
CDS-3UTR CCA 90 bp TGGTTGCTACCATTTCTTGTCCTTGAGAAAGGTGCTCCTAGTGCTTGTAGAGGGAAGAGTTTTGGGAAGTaGATTTGGAGAGACTCTTTT +
Preference number: 4 (lower is better)
Translates to: WLLPFLVLEKGAPSACRGKSFGK*IWRDSF
Trigger: AAAAGAGTCTCTCCAAATCCACTTCCCAAAACTCTT...CCCTCTACAAGCACTAGGAGCACCTTTCTCAAGGACAAGAAATGGTAGCAACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
CDS-3UTR CCA 90 bp AACTGCAGGTTTCCAATTGGTTATGATGTGCCAGAGACCAGGAAATGCCAGAGGAAGAGTTTTGGGAAGTaGATTTGGAGAGACTCTTTT +
Preference number: 4 (lower is better)
Translates to: NCRFPIGYDVPETRKCQRKSFGK*IWRDSF
Trigger: AAAAGAGTCTCTCCAAATCCACTTCCCAAAACTCTT...CCTCTGGCATTTCCTGGTCTCTGGCACATCATAACCAATTGGAAACCTGCAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
3UTR CAA 72 bp AGAAGGAAGGATTGTTTCCTTCAACCAACCTTTTGGTaGCTACCATTTCTTGTCCTTGAGAAAGGTGCTCCT +
Preference number: 4 (lower is better)
Translates to: RRKDCFLQPTFW*LPFLVLEKGAP
Trigger: AGGAGCACCTTTCTCAAGGACAAGAAATGGTAGCAACCAAAAGGTTGGTTGAAGGAAACAATCCTTCCTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
CDS-3UTR GCA 90 bp TATGATGTGCCAGAGACCAGGAAATGCCAGAGGGATGTTTGTAACAAAGCTGCCTTATTGCTCAGCTTATaGATCTTAACTATGAAAGGG +
Preference number: 4 (lower is better)
Translates to: YDVPETRKCQRDVCNKAALLLSL*ILTMKG
Trigger: CCCTTTCATAGTTAAGATGCATAAGCTGAGCAATAA...GGCAGCTTTGTTACAAACATCCCTCTGGCATTTCCTGGTCTCTGGCACATCATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
CDS GCA 90 bp TACACGGAATTAGACGGGATGTCCACCTCCTCCACGCCCGCGTGCTaGCGGCTCGTCAGGGCCCCCATGGCCGCTGCGGCTGCAGCCCCG +
Preference number: 5 (lower is better)
Translates to: YTELDGMSTSSTPAC*RLVRAPMAAAAAAP
Trigger: CGGGGCTGCAGCCGCAGCGGCCATGGGGGCCCTGACGAGCCGGCAGCACGCGGGCGTGGAGGAGGTGGACATCCCGTCTAATTCCGTGTA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000592271.1
ENST00000647930.1
CDS GCA 90 bp CGGTACACGGAATTAGACGGGATGTCCACCTCCTCCACGCCCGCGTaGTGCCGGCTCGTCAGGGCCCCCATGGCCGCTGCGGCTGCAGCC +
Preference number: 5 (lower is better)
Translates to: RYTELDGMSTSSTPA*CRLVRAPMAAAAAA
Trigger: GGCTGCAGCCGCAGCGGCCATGGGGGCCCTGACGAGCCGGCAGCACGCGGGCGTGGAGGAGGTGGACATCCCGTCTAATTCCGTGTACCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000592271.1
ENST00000647930.1
CDS CCA 90 bp CTCGTCTCAGAGTCCTCCAGGCTGCTGGATGACAAGCGCCGGCGCTaGGCATTCCGACTGACGGCATTGTCATCAGCCTGCCAGGCACCA +
Preference number: 5 (lower is better)
Translates to: LVSESSRLLDDKRRR*AFRLTALSSACQAP
Trigger: TGGTGCCTGGCAGGCTGATGACAATGCCGTCAGTCGGAATGCCCAGCGCCGGCGCTTGTCATCCAGCAGCCTGGAGGACTCTGAGACGAG
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000589317.1
ENST00000647930.1
CDS-3UTR CAA 90 bp TCCAGGCTGCTGGATGACAAGCGCCGGCGCTGGGCATTCCGACTGACGGCATTGGGGAGGCCAGCAAAGTaGCTGTCTGGAGACTCCGCT +
Preference number: 5 (lower is better)
Translates to: SRLLDDKRRRWAFRLTALGRPAK*LSGDSA
Trigger: AGCGGAGTCTCCAGACAGCAACTTTGCTGGCCTCCC...CAATGCCGTCAGTCGGAATGCCCAGCGCCGGCGCTTGTCATCCAGCAGCCTGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591355.1
CDS-3UTR CAA 90 bp CTGGCCTCTGCAGCCACACAGAAACGAAGGACCCCCTGGGCACCAGGCTCTTTTAGTCTTCACGGGTTCTaGGGGAGGTGGGGCGGCGTA +
Preference number: 5 (lower is better)
Translates to: LASAATQKRRTPWAPGSFSLHGF*GRWGGV
Trigger: TACGCCGCCCCACCTCCCCAAGAACCCGTGAAGACT...AAAAGAGCCTGGTGCCCAGGGGGTCCTTCGTTTCTGTGTGGCTGCAGAGGCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
CDS-3UTR CAA 90 bp AAGCGCCGGCGCTGGGCATTCCGACTGACGGCATTGTCATCAGCCTGCCAGGCATTCCGACTGACGGCATaGTCATCAGCCTGCCAGGCA +
Preference number: 5 (lower is better)
Translates to: KRRRWAFRLTALSSACQAFRLTA*SSACQA
Trigger: TGCCTGGCAGGCTGATGACAATGCCGTCAGTCGGAA...TGCCTGGCAGGCTGATGACAATGCCGTCAGTCGGAATGCCCAGCGCCGGCGCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591355.1
CDS TCA 90 bp CCTCCAGGCTGCTGGATGACAAGCGCCGGCGCTGGGCATTCCGACTaGCGGCATTGTCATCAGCCTGCCAGGCACCTATTCCTCAATGTT +
Preference number: 5 (lower is better)
Translates to: PPGCWMTSAGAGHSD*RHCHQPARHLFLNV
Trigger: AACATTGAGGAATAGGTGCCTGGCAGGCTGATGACAATGCCGTCAGTCGGAATGCCCAGCGCCGGCGCTTGTCATCCAGCAGCCTGGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591355.1
CDS-3UTR CAA 90 bp AGAAAGGTGCTCCTAGTGCTTGTAGAGGGAAACGCTACGTCCGTGCAGTATGGCGGGGTGAGGGGCCCGTaGAGGGCCTCCAGAAGAGAT +
Preference number: 5 (lower is better)
Translates to: RKVLLVLVEGNATSVQYGGVRGP*RASRRD
Trigger: ATCTCTTCTGGAGGCCCTCAACGGGCCCCTCACCCC...GCCATACTGCACGGACGTAGCGTTTCCCTCTACAAGCACTAGGAGCACCTTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
CDS-3UTR CAA 90 bp GTCCTTGAGAAAGGTGCTCCTAGTGCTTGTAGAGGGAAACGCTACGTCCGTGCAGGGGTGAGGGGCCCGTaGAGGGCCTCCAGAAGAGAT +
Preference number: 5 (lower is better)
Translates to: VLEKGAPSACRGKRYVRAGVRGP*RASRRD
Trigger: ATCTCTTCTGGAGGCCCTCAACGGGCCCCTCACCCC...TGCACGGACGTAGCGTTTCCCTCTACAAGCACTAGGAGCACCTTTCTCAAGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
CDS-3UTR CAA 90 bp CTCTGCAGCCACACAGAAACGAAGGACCCCCTGGGCACCAGGCTCTTTTTGAGGGGCACCAGGCTCTTTTaGAGGCTGCCTTGGAAACAG +
Preference number: 5 (lower is better)
Translates to: LCSHTETKDPLGTRLFLRGTRLF*RLPWKQ
Trigger: CTGTTTCCAAGGCAGCCTCAAAAAGAGCCTGGTGCC...CCTCAAAAAGAGCCTGGTGCCCAGGGGGTCCTTCGTTTCTGTGTGGCTGCAGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
CDS CCA 90 bp GTGAGATTCTCACTTTCTGGAGTCACACCACATTCCTGGGGGTTGTaGGGGGACACAACAGGACATGGAGCAAGCGCCAGTCACCTCTCC +
Preference number: 5 (lower is better)
Translates to: VRFSLSGVTPHSWGL*GDTTGHGASASHLS
Trigger: GGAGAGGTGACTGGCGCTTGCTCCATGTCCTGTTGTGTCCCCCCACAACCCCCAGGAATGTGGTGTGACTCCAGAAAGTGAGAATCTCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000592869.1
CDS-3UTR CAA 90 bp GAGGGAAACGCTACGTCCGTGCAGTATGGCTCTCCCTTTCCACAGGAGCGATCCACTTCCTCAGCACATTaGACGAGCCTCAGTGTGTCC +
Preference number: 5 (lower is better)
Translates to: EGNATSVQYGSPFPQERSTSSAH*TSLSVS
Trigger: GGACACACTGAGGCTCGTCAAATGTGCTGAGGAAGT...GGATCGCTCCTGTGGAAAGGGAGAGCCATACTGCACGGACGTAGCGTTTCCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
CDS-3UTR CAA 90 bp CGCTACGTCCGTGCAGTATGGCTCTCCCTTTCCACAGGAGCGATCCTCCAGCCCCCAGTGCTTTCACGCTaGCGATGTCAAAGTCATTGT +
Preference number: 5 (lower is better)
Translates to: RYVRAVWLSLSTGAILQPPVLSR*RCQSHC
Trigger: ACAATGACTTTGACATCGCAAGCGTGAAAGCACTGG...GGGCTGGAGGATCGCTCCTGTGGAAAGGGAGAGCCATACTGCACGGACGTAGCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
CDS-3UTR CAA 90 bp GATGACAAGCGCCGGCGCTGGGCATTCCGACTGACGGCATTGTCATCAGCCTGCCCAGTGCTTTCACGCTaGCGATGTCAAAGTCATTGT +
Preference number: 5 (lower is better)
Translates to: DDKRRRWAFRLTALSSACPVLSR*RCQSHC
Trigger: ACAATGACTTTGACATCGCAAGCGTGAAAGCACTGG...GCAGGCTGATGACAATGCCGTCAGTCGGAATGCCCAGCGCCGGCGCTTGTCATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591355.1
CDS-3UTR CAA 90 bp GATGACAAGCGCCGGCGCTGGGCATTCCGACTGACGGCATTGTCATCAGCCTGCTCAGAGCACAGCTTATaGTCCAGTGCTTTCACGCTT +
Preference number: 5 (lower is better)
Translates to: DDKRRRWAFRLTALSSACSEHSL*SSAFTL
Trigger: AAGCGTGAAAGCACTGGACAATAAGCTGTGCTCTGA...GCAGGCTGATGACAATGCCGTCAGTCGGAATGCCCAGCGCCGGCGCTTGTCATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591355.1
CDS-3UTR CAA 90 bp GGTGCTCCTAGTGCTTGTAGAGGGAAACGCTACGTCCGTGCAGTATGGCTCTCCGGCACCAGGCTCTTTTaGAGGCTGCCTTGGAAACAG +
Preference number: 5 (lower is better)
Translates to: GAPSACRGKRYVRAVWLSGTRLF*RLPWKQ
Trigger: CTGTTTCCAAGGCAGCCTCAAAAAGAGCCTGGTGCC...GGAGAGCCATACTGCACGGACGTAGCGTTTCCCTCTACAAGCACTAGGAGCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
CDS-3UTR CAA 90 bp ACCAGGCCTTCCCCCATGAGGCAACTCACCAAGGCCTGGCCTGCCCAGGTAGTGACTACTTGTTTCTGTTaGAGGGGCTTGACACAGAAA +
Preference number: 5 (lower is better)
Translates to: TRPSPMRQLTKAWPAQVVTTCFC*RGLTQK
Trigger: TTTCTGTGTCAAGCCCCTCAAACAGAAACAAGTAGT...CACTACCTGGGCAGGCCAGGCCTTGGTGAGTTGCCTCATGGGGGAAGGCCTGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000591615.1
CDS-3UTR CAA 90 bp TGGTTGCTACCATTTCTTGTCCTTGAGAAAGGTGCTCCTAGTGCTTGTAGAGGGGGGGTGAGGGGCCCGTaGAGGGCCTCCAGAAGAGAT +
Preference number: 5 (lower is better)
Translates to: WLLPFLVLEKGAPSACRGGVRGP*RASRRD
Trigger: ATCTCTTCTGGAGGCCCTCAACGGGCCCCTCACCCC...CCCTCTACAAGCACTAGGAGCACCTTTCTCAAGGACAAGAAATGGTAGCAACCA
56% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
CDS-3UTR CAA 90 bp AGGACCAGCTCCTTGGATGGAGTATTTCTGTGGGCCAGAGAGCTAAATGACAGCGGGAGGCCAGCAAAGTaGCTGTCTGGAGACTCCGCT +
Preference number: 5 (lower is better)
Translates to: RTSSLDGVFLWARELNDSGRPAK*LSGDSA
Trigger: AGCGGAGTCTCCAGACAGCAACTTTGCTGGCCTCCC...GCTGTCATTTAGCTCTCTGGCCCACAGAAATACTCCATCCAAGGAGCTGGTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
CDS-3UTR CAA 90 bp CAAGCGCCGGCGCTGGGCATTCCGACTGACGGCATTGTCATCAGCCTGCCAGGCGCGATGTCAAAGTCATaGTTATTGTCACACTCCATA +
Preference number: 5 (lower is better)
Translates to: QAPALGIPTDGIVISLPGAMSKS*LLSHSI
Trigger: TATGGAGTGTGACAATAACAATGACTTTGACATCGC...GCCTGGCAGGCTGATGACAATGCCGTCAGTCGGAATGCCCAGCGCCGGCGCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591355.1
CDS-3UTR CAA 90 bp CTGGCCTCTGCAGCCACACAGAAACGAAGGACCCCCTGGGCACCAGGCTCTTTTCTGAGAGGTGAGGGATaGTGGTTACAGGTTGTAACA +
Preference number: 5 (lower is better)
Translates to: LASAATQKRRTPWAPGSFLRGEG*WLQVVT
Trigger: TGTTACAACCTGTAACCACAATCCCTCACCTCTCAG...AAAAGAGCCTGGTGCCCAGGGGGTCCTTCGTTTCTGTGTGGCTGCAGAGGCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
CDS-3UTR CAA 90 bp ACCAGGCCTTCCCCCATGAGGCAACTCACCAAGGCCTGGCCTGCCCAGGTAGTGGCTTTATCCTTTCGCTaGAAATGTTTCTCACTCTGG +
Preference number: 5 (lower is better)
Translates to: TRPSPMRQLTKAWPAQVVALSFR*KCFSLW
Trigger: CCAGAGTGAGAAACATTTCAAGCGAAAGGATAAAGC...CACTACCTGGGCAGGCCAGGCCTTGGTGAGTTGCCTCATGGGGGAAGGCCTGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000591615.1
CDS-3UTR CAA 90 bp CATTCCAGAGTCCCTGCAAAAGGTCTCGTGAGCTGCAGTTCATTGAGTGGCTTTGGGAGGCCAGCAAAGTaGCTGTCTGGAGACTCCGCT +
Preference number: 5 (lower is better)
Translates to: HSRVPAKGLVSCSSLSGFGRPAK*LSGDSA
Trigger: AGCGGAGTCTCCAGACAGCAACTTTGCTGGCCTCCC...AAAGCCACTCAATGAACTGCAGCTCACGAGACCTTTTGCAGGGACTCTGGAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
CDS-3UTR CAA 90 bp CAATATACCGTGAGGACATTCCAGAGTCCCTGCAAAAGGTCTCGTGAGCTGCAGTTCCGACTGACGGCATaGTCATCAGCCTGCCAGGCA +
Preference number: 5 (lower is better)
Translates to: QYTVRTFQSPCKRSRELQFRLTA*SSACQA
Trigger: TGCCTGGCAGGCTGATGACAATGCCGTCAGTCGGAA...CTGCAGCTCACGAGACCTTTTGCAGGGACTCTGGAATGTCCTCACGGTATATTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
CDS-3UTR CAA 90 bp GTCCTTGAGAAAGGTGCTCCTAGTGCTTGTAGAGGGAAACGCTACGTCCGTGCACACCTTAGGATGGAGTaGCAGGCCTCCCTGAATGCA +
Preference number: 5 (lower is better)
Translates to: VLEKGAPSACRGKRYVRAHLRME*QASLNA
Trigger: TGCATTCAGGGAGGCCTGCAACTCCATCCTAAGGTG...TGCACGGACGTAGCGTTTCCCTCTACAAGCACTAGGAGCACCTTTCTCAAGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
CDS-3UTR CAA 90 bp AGGACCAGCTCCTTGGATGGAGTATTTCTGTGGGCCAGAGAGCTAAATGACAGCCTCCTCACCCAGTGCTaGGCACACAGAGGTGGTCAA +
Preference number: 5 (lower is better)
Translates to: RTSSLDGVFLWARELNDSLLTQC*AHRGGQ
Trigger: TTGACCACCTCTGTGTGCCAAGCACTGGGTGAGGAG...GCTGTCATTTAGCTCTCTGGCCCACAGAAATACTCCATCCAAGGAGCTGGTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
CDS-3UTR CAA 90 bp CTGGCCTCTGCAGCCACACAGAAACGAAGGACCCCCTGGGCACCAGGCTCTTTTCAGGAAGTGGGGTTATaGCTCAGCTTATGCATCTTA +
Preference number: 5 (lower is better)
Translates to: LASAATQKRRTPWAPGSFQEVGL*LSLCIL
Trigger: TAAGATGCATAAGCTGAGCAATAACCCCACTTCCTG...AAAAGAGCCTGGTGCCCAGGGGGTCCTTCGTTTCTGTGTGGCTGCAGAGGCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
CDS-3UTR CAA 90 bp AGGACCAGCTCCTTGGATGGAGTATTTCTGTGGGCCAGAGAGCTAAATGACAGCACTGGGGCAAAAGGGTaGGCCACTGACCTGTCCTCA +
Preference number: 5 (lower is better)
Translates to: RTSSLDGVFLWARELNDSTGAKG*ATDLSS
Trigger: TGAGGACAGGTCAGTGGCCAACCCTTTTGCCCCAGT...GCTGTCATTTAGCTCTCTGGCCCACAGAAATACTCCATCCAAGGAGCTGGTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
CDS-3UTR CAA 90 bp GGTGCTCCTAGTGCTTGTAGAGGGAAACGCTACGTCCGTGCAGTATGGCTCTCCCTGAGAGGTGAGGGATaGTGGTTACAGGTTGTAACA +
Preference number: 5 (lower is better)
Translates to: GAPSACRGKRYVRAVWLSLRGEG*WLQVVT
Trigger: TGTTACAACCTGTAACCACAATCCCTCACCTCTCAG...GGAGAGCCATACTGCACGGACGTAGCGTTTCCCTCTACAAGCACTAGGAGCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
CDS-3UTR CAA 90 bp AACGAAGGACCCCCTGGGCACCAGGCTCTTTTTGAGGCTGCCTTGGAAACAGCCTACCATTTCTTGTCCTaGAGAAAGGTGCTCCTAGTG +
Preference number: 5 (lower is better)
Translates to: NEGPPGHQALFEAALETAYHFLS*RKVLLV
Trigger: CACTAGGAGCACCTTTCTCAAGGACAAGAAATGGTA...GGCTGTTTCCAAGGCAGCCTCAAAAAGAGCCTGGTGCCCAGGGGGTCCTTCGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
CDS-3UTR CAA 90 bp CGATCCTCCAGCCCTACCCCAAACTGCAGGTTTCCAATTGGTTATGATGTGCCACACCTTAGGATGGAGTaGCAGGCCTCCCTGAATGCA +
Preference number: 5 (lower is better)
Translates to: RSSSPTPNCRFPIGYDVPHLRME*QASLNA
Trigger: TGCATTCAGGGAGGCCTGCAACTCCATCCTAAGGTG...TGGCACATCATAACCAATTGGAAACCTGCAGTTTGGGGTAGGGCTGGAGGATCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
CDS-3UTR CAA 90 bp TTTGGGGACCTGGGCACCAAACTGAGAATCACTGGTCCACATTTCTCTCAACCACTCCTCACCCAGTGCTaGGCACACAGAGGTGGTCAA +
Preference number: 5 (lower is better)
Translates to: FGDLGTKLRITGPHFSQPLLTQC*AHRGGQ
Trigger: TTGACCACCTCTGTGTGCCAAGCACTGGGTGAGGAG...TGGTTGAGAGAAATGTGGACCAGTGATTCTCAGTTTGGTGCCCAGGTCCCCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
CDS-3UTR CAA 90 bp AGGACCAGCTCCTTGGATGGAGTATTTCTGTGGGCCAGAGAGCTAAATGACAGCTCTCCATCACTTCCTTaGGGGACCTGGGCACCAAAC +
Preference number: 5 (lower is better)
Translates to: RTSSLDGVFLWARELNDSSPSLP*GTWAPN
Trigger: GTTTGGTGCCCAGGTCCCCAAAGGAAGTGATGGAGA...GCTGTCATTTAGCTCTCTGGCCCACAGAAATACTCCATCCAAGGAGCTGGTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
CDS-3UTR CAA 90 bp GAAATTAGCCCATGGACCCCAGCTCCACCTGAACATCAATATACCGTGAGGACAACTGGGGCAAAAGGGTaGGCCACTGACCTGTCCTCA +
Preference number: 5 (lower is better)
Translates to: EISPWTPAPPEHQYTVRTTGAKG*ATDLSS
Trigger: TGAGGACAGGTCAGTGGCCAACCCTTTTGCCCCAGT...TGTCCTCACGGTATATTGATGTTCAGGTGGAGCTGGGGTCCATGGGCTAATTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
CDS-3UTR CAA 90 bp ACCAGGCCTTCCCCCATGAGGCAACTCACCAAGGCCTGGCCTGCCCAGGTAGTGTCAAATACTTACTACTaGTTTCTGTTTGAGGGGCTT +
Preference number: 5 (lower is better)
Translates to: TRPSPMRQLTKAWPAQVVSNTYY*FLFEGL
Trigger: AAGCCCCTCAAACAGAAACAAGTAGTAAGTATTTGA...CACTACCTGGGCAGGCCAGGCCTTGGTGAGTTGCCTCATGGGGGAAGGCCTGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000591615.1
CDS-3UTR CAA 90 bp CTTGAAGTGAAGGCCCTGAGCCCTGATTCCAACCTCTGCTCCCAGCACACTGCTTTCTGTTTGAGGGGCTaGACACAGAAAGTTCCATCT +
Preference number: 5 (lower is better)
Translates to: LEVKALSPDSNLCSQHTAFCLRG*TQKVPS
Trigger: AGATGGAACTTTCTGTGTCAAGCCCCTCAAACAGAA...AGCAGTGTGCTGGGAGCAGAGGTTGGAATCAGGGCTCAGGGCCTTCACTTCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
CDS-3UTR CAA 90 bp GTCCTTGAGAAAGGTGCTCCTAGTGCTTGTAGAGGGAAACGCTACGTCCGTGCAGACCCCGTCTACTACTaGTTTCTGTTTGAGGGGCTT +
Preference number: 5 (lower is better)
Translates to: VLEKGAPSACRGKRYVRADPVYY*FLFEGL
Trigger: AAGCCCCTCAAACAGAAACAAGTAGTAGACGGGGTC...TGCACGGACGTAGCGTTTCCCTCTACAAGCACTAGGAGCACCTTTCTCAAGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
CDS-3UTR CAA 90 bp AGGCTGCTGGATGACAAGCGCCGGCGCTGGGCATTCCGACTGACGGCATTGTCATCAAAGTCATTGTTATaGTCACACTCCATACCTAGA +
Preference number: 5 (lower is better)
Translates to: RLLDDKRRRWAFRLTALSSKSLL*SHSIPR
Trigger: TCTAGGTATGGAGTGTGACAATAACAATGACTTTGA...TGACAATGCCGTCAGTCGGAATGCCCAGCGCCGGCGCTTGTCATCCAGCAGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591355.1
CDS-3UTR CAA 90 bp TGGTTGCTACCATTTCTTGTCCTTGAGAAAGGTGCTCCTAGTGCTTGTAGAGGGTTCCGACTGACGGCATaGTCATCAGCCTGCCAGGCA +
Preference number: 5 (lower is better)
Translates to: WLLPFLVLEKGAPSACRGFRLTA*SSACQA
Trigger: TGCCTGGCAGGCTGATGACAATGCCGTCAGTCGGAA...CCCTCTACAAGCACTAGGAGCACCTTTCTCAAGGACAAGAAATGGTAGCAACCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
CDS-3UTR CAA 90 bp CATTTCTTGTCCTTGAGAAAGGTGCTCCTAGTGCTTGTAGAGGGAAACGCTACGTTCCGACTGACGGCATaGTCATCAGCCTGCCAGGCA +
Preference number: 5 (lower is better)
Translates to: HFLSLRKVLLVLVEGNATFRLTA*SSACQA
Trigger: TGCCTGGCAGGCTGATGACAATGCCGTCAGTCGGAA...CGTAGCGTTTCCCTCTACAAGCACTAGGAGCACCTTTCTCAAGGACAAGAAATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
CDS-3UTR CAA 90 bp CTCAAGGCTCTCCATCACTTCCTTTGGGGACCTGGGCACCAAACTGAGAATCACGTGAGCTGCAGTTCATaGAGTGGCTTTAGGTCACAC +
Preference number: 5 (lower is better)
Translates to: LKALHHFLWGPGHQTENHVSCSS*SGFRSH
Trigger: GTGTGACCTAAAGCCACTCAATGAACTGCAGCTCAC...GTGATTCTCAGTTTGGTGCCCAGGTCCCCAAAGGAAGTGATGGAGAGCCTTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
CDS-3UTR CAA 90 bp CATTCCAGAGTCCCTGCAAAAGGTCTCGTGAGCTGCAGTTCATTGAGTGGCTTTTCTCCATCACTTCCTTaGGGGACCTGGGCACCAAAC +
Preference number: 5 (lower is better)
Translates to: HSRVPAKGLVSCSSLSGFSPSLP*GTWAPN
Trigger: GTTTGGTGCCCAGGTCCCCAAAGGAAGTGATGGAGA...AAAGCCACTCAATGAACTGCAGCTCACGAGACCTTTTGCAGGGACTCTGGAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
CDS-3UTR CAA 90 bp AACGAAGGACCCCCTGGGCACCAGGCTCTTTTTGAGGCTGCCTTGGAAACAGCCCTTTTTGAGGCTGCCTaGGAAACAGCCTTGAATTTT +
Preference number: 5 (lower is better)
Translates to: NEGPPGHQALFEAALETALFEAA*ETALNF
Trigger: AAAATTCAAGGCTGTTTCCAAGGCAGCCTCAAAAAG...GGCTGTTTCCAAGGCAGCCTCAAAAAGAGCCTGGTGCCCAGGGGGTCCTTCGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
CDS-3UTR CAA 90 bp AGCGATCCTCCAGCCCTACCCCAAACTGCAGGTTTCCAATTGGTTATGATGTGCCATGGGACTGAGGCCTaGAGGAATCTTTCCGTGCTT +
Preference number: 5 (lower is better)
Translates to: SDPPALPQTAGFQLVMMCHGTEA*RNLSVL
Trigger: AAGCACGGAAAGATTCCTCAAGGCCTCAGTCCCATG...GCACATCATAACCAATTGGAAACCTGCAGTTTGGGGTAGGGCTGGAGGATCGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
CDS CCA 90 bp ACTTCGTCTTCAGCCACCTGGCCAAGGAGAAAGAAATGTAGCCAATaGCACAAAGCCCTTCCTGTCCCATACTTTACTGACAAGGCAGCG +
Preference number: 5 (lower is better)
Translates to: TSSSATWPRRKKCSQ*HKALPVPYFTDKAA
Trigger: CGCTGCCTTGTCAGTAAAGTATGGGACAGGAAGGGCTTTGTGCCATTGGCTACATTTCTTTCTCCTTGGCCAGGTGGCTGAAGACGAAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593155.1
CDS CCA 90 bp ACCACACACTCGGCACTGTTATCACTCACTTCGTCTTCAGCCACCTaGCCAAGGAGAAAGAAATGTAGCCAATGGCACAAAGCCCTTCCT +
Preference number: 5 (lower is better)
Translates to: TTHSALLSLTSSSAT*PRRKKCSQWHKALP
Trigger: AGGAAGGGCTTTGTGCCATTGGCTACATTTCTTTCTCCTTGGCCAGGTGGCTGAAGACGAAGTGAGTGATAACAGTGCCGAGTGTGTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593155.1
CDS-3UTR CAA 90 bp AGCGATCCTCCAGCCCTACCCCAAACTGCAGGTTTCCAATTGGTTATGATGTGCGTGTCCTTTCGGATATaGACCAGGCTTCTCAGAGTC +
Preference number: 5 (lower is better)
Translates to: SDPPALPQTAGFQLVMMCVSFRI*TRLLRV
Trigger: GACTCTGAGAAGCCTGGTCAATATCCGAAAGGACAC...GCACATCATAACCAATTGGAAACCTGCAGTTTGGGGTAGGGCTGGAGGATCGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
CDS-3UTR CAA 90 bp ACTCCTCACCCAGTGCTTGGCACACAGAGGTGGTCAACACATGTGTTTCTTGAAACTTCCTCAGCACATTaGACGAGCCTCAGTGTGTCC +
Preference number: 5 (lower is better)
Translates to: TPHPVLGTQRWSTHVFLETSSAH*TSLSVS
Trigger: GGACACACTGAGGCTCGTCAAATGTGCTGAGGAAGT...TTCAAGAAACACATGTGTTGACCACCTCTGTGTGCCAAGCACTGGGTGAGGAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
CDS-3UTR CAA 90 bp AGCGATCCTCCAGCCCTACCCCAAACTGCAGGTTTCCAATTGGTTATGATGTGCGACCCCGTCTACTACTaGTTTCTGTTTGAGGGGCTT +
Preference number: 5 (lower is better)
Translates to: SDPPALPQTAGFQLVMMCDPVYY*FLFEGL
Trigger: AAGCCCCTCAAACAGAAACAAGTAGTAGACGGGGTC...GCACATCATAACCAATTGGAAACCTGCAGTTTGGGGTAGGGCTGGAGGATCGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
CDS-3UTR CAA 90 bp AGAAAGGTGCTCCTAGTGCTTGTAGAGGGAAACGCTACGTCCGTGCAGTATGGCTCAGAGCACAGCTTATaGTCCAGTGCTTTCACGCTT +
Preference number: 5 (lower is better)
Translates to: RKVLLVLVEGNATSVQYGSEHSL*SSAFTL
Trigger: AAGCGTGAAAGCACTGGACAATAAGCTGTGCTCTGA...GCCATACTGCACGGACGTAGCGTTTCCCTCTACAAGCACTAGGAGCACCTTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
CDS-3UTR CAA 90 bp CAATATACCGTGAGGACATTCCAGAGTCCCTGCAAAAGGTCTCGTGAGCTGCAGGTGAGCTGCAGTTCATaGAGTGGCTTTAGGTCACAC +
Preference number: 5 (lower is better)
Translates to: QYTVRTFQSPCKRSRELQVSCSS*SGFRSH
Trigger: GTGTGACCTAAAGCCACTCAATGAACTGCAGCTCAC...CTGCAGCTCACGAGACCTTTTGCAGGGACTCTGGAATGTCCTCACGGTATATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
CDS-3UTR CAA 90 bp GAAATTAGCCCATGGACCCCAGCTCCACCTGAACATCAATATACCGTGAGGACACATGGGACTGAGGCCTaGAGGAATCTTTCCGTGCTT +
Preference number: 5 (lower is better)
Translates to: EISPWTPAPPEHQYTVRTHGTEA*RNLSVL
Trigger: AAGCACGGAAAGATTCCTCAAGGCCTCAGTCCCATG...TGTCCTCACGGTATATTGATGTTCAGGTGGAGCTGGGGTCCATGGGCTAATTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
CDS-3UTR CAA 90 bp GTGCCAGAGACCAGGAAATGCCAGAGGGATGTTTGTAACAAAGCTGCCAAACTCCTGAGGACCAGCTCCTaGGATGGAGTATTTCTGTGG +
Preference number: 5 (lower is better)
Translates to: VPETRKCQRDVCNKAAKLLRTSS*DGVFLW
Trigger: CCACAGAAATACTCCATCCAAGGAGCTGGTCCTCAG...GAGTTTGGCAGCTTTGTTACAAACATCCCTCTGGCATTTCCTGGTCTCTGGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
CDS-3UTR CAA 90 bp CAAGAGATCCCATACAACCAAGGAGGCTGCAGTTTGTCTTCTAGTGCATCTCTCGCCCTTGGAAAAGGGTaGCCTAAAGAGGTGACAGGG +
Preference number: 5 (lower is better)
Translates to: QEIPYNQGGCSLSSSASLALGKG*PKEVTG
Trigger: CCCTGTCACCTCTTTAGGCAACCCTTTTCCAAGGGC...GAGAGATGCACTAGAAGACAAACTGCAGCCTCCTTGGTTGTATGGGATCTCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592271.1
CDS GCA 90 bp AGCTGTGTCTCCGACTCGCTGCAGGAATGCTCATCTTCCTCTTCATaGAGCACGGAAGAGTTTTGGGAAGTGGATTTGGAGAGACTCTTT +
Preference number: 5 (lower is better)
Translates to: SCVSDSLQECSSSSS*STEEFWEVDLERLF
Trigger: AAAGAGTCTCTCCAAATCCACTTCCCAAAACTCTTCCGTGCTGCATGAAGAGGAAGATGAGCATTCCTGCAGCGAGTCGGAGACACAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
CDS-3UTR CAA 90 bp GTCCTTGAGAAAGGTGCTCCTAGTGCTTGTAGAGGGAAACGCTACGTCCGTGCAAACCTTCAGGATGAGTaGAGTCAAACTTCTCTCCTC +
Preference number: 5 (lower is better)
Translates to: VLEKGAPSACRGKRYVRANLQDE*SQTSLL
Trigger: GAGGAGAGAAGTTTGACTCAACTCATCCTGAAGGTT...TGCACGGACGTAGCGTTTCCCTCTACAAGCACTAGGAGCACCTTTCTCAAGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
CDS-3UTR CAA 90 bp GTGCCAGAGACCAGGAAATGCCAGAGGGATGTTTGTAACAAAGCTGCCAAACTCGTGTCCTTTCGGATATaGACCAGGCTTCTCAGAGTC +
Preference number: 5 (lower is better)
Translates to: VPETRKCQRDVCNKAAKLVSFRI*TRLLRV
Trigger: GACTCTGAGAAGCCTGGTCAATATCCGAAAGGACAC...GAGTTTGGCAGCTTTGTTACAAACATCCCTCTGGCATTTCCTGGTCTCTGGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
CDS-3UTR CAA 90 bp TTTGGGGACCTGGGCACCAAACTGAGAATCACTGGTCCACATTTCTCTCAACCAGTGTCCTTTCGGATATaGACCAGGCTTCTCAGAGTC +
Preference number: 5 (lower is better)
Translates to: FGDLGTKLRITGPHFSQPVSFRI*TRLLRV
Trigger: GACTCTGAGAAGCCTGGTCAATATCCGAAAGGACAC...TGGTTGAGAGAAATGTGGACCAGTGATTCTCAGTTTGGTGCCCAGGTCCCCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
CDS-3UTR CAA 90 bp GTCCTTGAGAAAGGTGCTCCTAGTGCTTGTAGAGGGAAACGCTACGTCCGTGCATTCTGTTTGAGGGGCTaGACACAGAAAGTTCCATCT +
Preference number: 5 (lower is better)
Translates to: VLEKGAPSACRGKRYVRAFCLRG*TQKVPS
Trigger: AGATGGAACTTTCTGTGTCAAGCCCCTCAAACAGAA...TGCACGGACGTAGCGTTTCCCTCTACAAGCACTAGGAGCACCTTTCTCAAGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
CDS-3UTR CAA 90 bp CAATATACCGTGAGGACATTCCAGAGTCCCTGCAAAAGGTCTCGTGAGCTGCAGTCAGAGCACAGCTTATaGTCCAGTGCTTTCACGCTT +
Preference number: 5 (lower is better)
Translates to: QYTVRTFQSPCKRSRELQSEHSL*SSAFTL
Trigger: AAGCGTGAAAGCACTGGACAATAAGCTGTGCTCTGA...CTGCAGCTCACGAGACCTTTTGCAGGGACTCTGGAATGTCCTCACGGTATATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
CDS-3UTR CAA 90 bp GTCCTTGAGAAAGGTGCTCCTAGTGCTTGTAGAGGGAAACGCTACGTCCGTGCAACTGCAGGTTTCCAATaGGTTATGATGTGCCAGAGA +
Preference number: 5 (lower is better)
Translates to: VLEKGAPSACRGKRYVRATAGFQ*VMMCQR
Trigger: TCTCTGGCACATCATAACCAATTGGAAACCTGCAGT...TGCACGGACGTAGCGTTTCCCTCTACAAGCACTAGGAGCACCTTTCTCAAGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
CDS-3UTR CAA 90 bp CTCAAGGCTCTCCATCACTTCCTTTGGGGACCTGGGCACCAAACTGAGAATCACCAGGAAGTGGGGTTATaGCTCAGCTTATGCATCTTA +
Preference number: 5 (lower is better)
Translates to: LKALHHFLWGPGHQTENHQEVGL*LSLCIL
Trigger: TAAGATGCATAAGCTGAGCAATAACCCCACTTCCTG...GTGATTCTCAGTTTGGTGCCCAGGTCCCCAAAGGAAGTGATGGAGAGCCTTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
CDS-3UTR CAA 90 bp TGGTTGCTACCATTTCTTGTCCTTGAGAAAGGTGCTCCTAGTGCTTGTAGAGGGCTGAGGACCAGCTCCTaGGATGGAGTATTTCTGTGG +
Preference number: 5 (lower is better)
Translates to: WLLPFLVLEKGAPSACRGLRTSS*DGVFLW
Trigger: CCACAGAAATACTCCATCCAAGGAGCTGGTCCTCAG...CCCTCTACAAGCACTAGGAGCACCTTTCTCAAGGACAAGAAATGGTAGCAACCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
CDS-3UTR CAA 90 bp CTACCTCTACAAGAGTGGAAAGAAAAGTGCTGGCACATGGTAGGGGCTGGGACTATGTCAGTGTCTAAGTaGGCCCTGCCCCATTTACTT +
Preference number: 5 (lower is better)
Translates to: LPLQEWKEKCWHMVGAGTMSVSK*ALPHLL
Trigger: AAGTAAATGGGGCAGGGCCAACTTAGACACTGACAT...AGTCCCAGCCCCTACCATGTGCCAGCACTTTTCTTTCCACTCTTGTAGAGGTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000591615.1
CDS CCA 90 bp TCATTGTTATTGTCACACTCCATACCTAGAAATGCGCACGTCCTCTaGCCTGTAACGGAGTTAATGCAGTTAGAGAGGGGCTGGCTGTGT +
Preference number: 5 (lower is better)
Translates to: SLLLSHSIPRNAHVL*PVTELMQLERGWLC
Trigger: ACACAGCCAGCCCCTCTCTAACTGCATTAACTCCGTTACAGGCCAGAGGACGTGCGCATTTCTAGGTATGGAGTGTGACAATAACAATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589317.1
CDS-3UTR CAA 90 bp CAATATACCGTGAGGACATTCCAGAGTCCCTGCAAAAGGTCTCGTGAGCTGCAGAACCTTCAGGATGAGTaGAGTCAAACTTCTCTCCTC +
Preference number: 5 (lower is better)
Translates to: QYTVRTFQSPCKRSRELQNLQDE*SQTSLL
Trigger: GAGGAGAGAAGTTTGACTCAACTCATCCTGAAGGTT...CTGCAGCTCACGAGACCTTTTGCAGGGACTCTGGAATGTCCTCACGGTATATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
CDS-3UTR CAA 90 bp TCCAGGAGCTCTTCCAGTCCTCTAGCAACAAGAGATCCCATACAACCAAGGAGGAACCTTCAGGATGAGTaGAGTCAAACTTCTCTCCTC +
Preference number: 5 (lower is better)
Translates to: SRSSSSPLATRDPIQPRRNLQDE*SQTSLL
Trigger: GAGGAGAGAAGTTTGACTCAACTCATCCTGAAGGTT...CCTCCTTGGTTGTATGGGATCTCTTGTTGCTAGAGGACTGGAAGAGCTCCTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592271.1
CDS-3UTR CAA 90 bp CCTGAACATCAATATACCGTGAGGACATTCCAGAGTCCCTGCAAAAGGTCTCGTGACCCCGTCTACTACTaGTTTCTGTTTGAGGGGCTT +
Preference number: 5 (lower is better)
Translates to: PEHQYTVRTFQSPCKRSRDPVYY*FLFEGL
Trigger: AAGCCCCTCAAACAGAAACAAGTAGTAGACGGGGTC...ACGAGACCTTTTGCAGGGACTCTGGAATGTCCTCACGGTATATTGATGTTCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
CDS-3UTR CAA 90 bp GAAATTAGCCCATGGACCCCAGCTCCACCTGAACATCAATATACCGTGAGGACACCAGTGCTTTCACGCTaGCGATGTCAAAGTCATTGT +
Preference number: 5 (lower is better)
Translates to: EISPWTPAPPEHQYTVRTPVLSR*RCQSHC
Trigger: ACAATGACTTTGACATCGCAAGCGTGAAAGCACTGG...TGTCCTCACGGTATATTGATGTTCAGGTGGAGCTGGGGTCCATGGGCTAATTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
CDS-3UTR CAA 90 bp GAAATTAGCCCATGGACCCCAGCTCCACCTGAACATCAATATACCGTGAGGACACTGAGAGGTGAGGGATaGTGGTTACAGGTTGTAACA +
Preference number: 5 (lower is better)
Translates to: EISPWTPAPPEHQYTVRTLRGEG*WLQVVT
Trigger: TGTTACAACCTGTAACCACAATCCCTCACCTCTCAG...TGTCCTCACGGTATATTGATGTTCAGGTGGAGCTGGGGTCCATGGGCTAATTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
CDS-3UTR CAA 90 bp AGCGATCCTCCAGCCCTACCCCAAACTGCAGGTTTCCAATTGGTTATGATGTGCACTGCAGGTTTCCAATaGGTTATGATGTGCCAGAGA +
Preference number: 5 (lower is better)
Translates to: SDPPALPQTAGFQLVMMCTAGFQ*VMMCQR
Trigger: TCTCTGGCACATCATAACCAATTGGAAACCTGCAGT...GCACATCATAACCAATTGGAAACCTGCAGTTTGGGGTAGGGCTGGAGGATCGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
CDS-3UTR CAA 90 bp AGGACCAGCTCCTTGGATGGAGTATTTCTGTGGGCCAGAGAGCTAAATGACAGCCACCAGAAGGAAGGATaGTTTCCTTCAACCAACCTT +
Preference number: 5 (lower is better)
Translates to: RTSSLDGVFLWARELNDSHQKEG*FPSTNL
Trigger: AAGGTTGGTTGAAGGAAACAATCCTTCCTTCTGGTG...GCTGTCATTTAGCTCTCTGGCCCACAGAAATACTCCATCCAAGGAGCTGGTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
CDS-3UTR CAA 90 bp AACCAAGGAGGCTGCAGTTTGTCTTCTAGTGCATCTCTCTCAACTCAGACCAAGCAAGGAGGCTGCAGTTaGTCTTCTAGTGCATCTCTC +
Preference number: 5 (lower is better)
Translates to: NQGGCSLSSSASLSTQTKQGGCS*SSSASL
Trigger: GAGAGATGCACTAGAAGACAAACTGCAGCCTCCTTG...CTTGGTCTGAGTTGAGAGAGATGCACTAGAAGACAAACTGCAGCCTCCTTGGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592271.1
CDS-3UTR CAA 90 bp TTGGCAAGGAAAAAGATGGGAAGGGAAAATATGGATGCAAAGGGCGATAGCAAGGGCGATAGCAAGACCTaGAGGGAGAGGCTAATGGTG +
Preference number: 5 (lower is better)
Translates to: LARKKMGRENMDAKGDSKGDSKT*RERLMV
Trigger: CACCATTAGCCTCTCCCTCAAGGTCTTGCTATCGCC...CTTGCTATCGCCCTTTGCATCCATATTTTCCCTTCCCATCTTTTTCCTTGCCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000591615.1
CDS-3UTR CAA 90 bp ATTGTGGTTACAGGTTGTAACAGCTGTCACAGGAGGGTAAAAAGTCTCCAGCATACTTCCTCAGCACATTaGACGAGCCTCAGTGTGTCC +
Preference number: 5 (lower is better)
Translates to: IVVTGCNSCHRRVKSLQHTSSAH*TSLSVS
Trigger: GGACACACTGAGGCTCGTCAAATGTGCTGAGGAAGT...ATGCTGGAGACTTTTTACCCTCCTGTGACAGCTGTTACAACCTGTAACCACAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
CDS-3UTR CAA 90 bp AGCGATCCTCCAGCCCTACCCCAAACTGCAGGTTTCCAATTGGTTATGATGTGCACTACTTGTTTCTGTTaGAGGGGCTTGACACAGAAA +
Preference number: 5 (lower is better)
Translates to: SDPPALPQTAGFQLVMMCTTCFC*RGLTQK
Trigger: TTTCTGTGTCAAGCCCCTCAAACAGAAACAAGTAGT...GCACATCATAACCAATTGGAAACCTGCAGTTTGGGGTAGGGCTGGAGGATCGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
CDS-3UTR CAA 90 bp AGAAAGGTGCTCCTAGTGCTTGTAGAGGGAAACGCTACGTCCGTGCAGTATGGCGCGATGTCAAAGTCATaGTTATTGTCACACTCCATA +
Preference number: 5 (lower is better)
Translates to: RKVLLVLVEGNATSVQYGAMSKS*LLSHSI
Trigger: TATGGAGTGTGACAATAACAATGACTTTGACATCGC...GCCATACTGCACGGACGTAGCGTTTCCCTCTACAAGCACTAGGAGCACCTTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
CDS-3UTR CAA 90 bp CCTGAACATCAATATACCGTGAGGACATTCCAGAGTCCCTGCAAAAGGTCTCGTCCAGTGCTTTCACGCTaGCGATGTCAAAGTCATTGT +
Preference number: 5 (lower is better)
Translates to: PEHQYTVRTFQSPCKRSRPVLSR*RCQSHC
Trigger: ACAATGACTTTGACATCGCAAGCGTGAAAGCACTGG...ACGAGACCTTTTGCAGGGACTCTGGAATGTCCTCACGGTATATTGATGTTCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
CDS-3UTR CAA 90 bp CCATTTCTTGTCCTTGAGAAAGGTGCTCCTAGTGCTTGTAGAGGGAAACGCTACTCAGAGCACAGCTTATaGTCCAGTGCTTTCACGCTT +
Preference number: 5 (lower is better)
Translates to: PFLVLEKGAPSACRGKRYSEHSL*SSAFTL
Trigger: AAGCGTGAAAGCACTGGACAATAAGCTGTGCTCTGA...GTAGCGTTTCCCTCTACAAGCACTAGGAGCACCTTTCTCAAGGACAAGAAATGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
CDS-3UTR CAA 90 bp CATTCCAGAGTCCCTGCAAAAGGTCTCGTGAGCTGCAGTTCATTGAGTGGCTTTTACCATTTCTTGTCCTaGAGAAAGGTGCTCCTAGTG +
Preference number: 5 (lower is better)
Translates to: HSRVPAKGLVSCSSLSGFYHFLS*RKVLLV
Trigger: CACTAGGAGCACCTTTCTCAAGGACAAGAAATGGTA...AAAGCCACTCAATGAACTGCAGCTCACGAGACCTTTTGCAGGGACTCTGGAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
CDS-3UTR CAA 90 bp ACCCCAAACTGCAGGTTTCCAATTGGTTATGATGTGCCAGAGACCAGGAAATGCAACCTTCAGGATGAGTaGAGTCAAACTTCTCTCCTC +
Preference number: 5 (lower is better)
Translates to: TPNCRFPIGYDVPETRKCNLQDE*SQTSLL
Trigger: GAGGAGAGAAGTTTGACTCAACTCATCCTGAAGGTT...GCATTTCCTGGTCTCTGGCACATCATAACCAATTGGAAACCTGCAGTTTGGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
CDS-3UTR CAA 90 bp CCTGAACATCAATATACCGTGAGGACATTCCAGAGTCCCTGCAAAAGGTCTCGTTTCTGTTTGAGGGGCTaGACACAGAAAGTTCCATCT +
Preference number: 5 (lower is better)
Translates to: PEHQYTVRTFQSPCKRSRFCLRG*TQKVPS
Trigger: AGATGGAACTTTCTGTGTCAAGCCCCTCAAACAGAA...ACGAGACCTTTTGCAGGGACTCTGGAATGTCCTCACGGTATATTGATGTTCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
CDS-3UTR CAA 90 bp CATTCCAGAGTCCCTGCAAAAGGTCTCGTGAGCTGCAGTTCATTGAGTGGCTTTACTACTTGTTTCTGTTaGAGGGGCTTGACACAGAAA +
Preference number: 5 (lower is better)
Translates to: HSRVPAKGLVSCSSLSGFTTCFC*RGLTQK
Trigger: TTTCTGTGTCAAGCCCCTCAAACAGAAACAAGTAGT...AAAGCCACTCAATGAACTGCAGCTCACGAGACCTTTTGCAGGGACTCTGGAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
CDS-3UTR CAA 90 bp ACTCCTCACCCAGTGCTTGGCACACAGAGGTGGTCAACACATGTGTTTCTTGAAACTACTTGTTTCTGTTaGAGGGGCTTGACACAGAAA +
Preference number: 5 (lower is better)
Translates to: TPHPVLGTQRWSTHVFLETTCFC*RGLTQK
Trigger: TTTCTGTGTCAAGCCCCTCAAACAGAAACAAGTAGT...TTCAAGAAACACATGTGTTGACCACCTCTGTGTGCCAAGCACTGGGTGAGGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
CDS-3UTR CAA 90 bp GTCCTTGAGAAAGGTGCTCCTAGTGCTTGTAGAGGGAAACGCTACGTCCGTGCATCAAAGTCATTGTTATaGTCACACTCCATACCTAGA +
Preference number: 5 (lower is better)
Translates to: VLEKGAPSACRGKRYVRASKSLL*SHSIPR
Trigger: TCTAGGTATGGAGTGTGACAATAACAATGACTTTGA...TGCACGGACGTAGCGTTTCCCTCTACAAGCACTAGGAGCACCTTTCTCAAGGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
CDS-3UTR CAA 90 bp TGGTTGCTACCATTTCTTGTCCTTGAGAAAGGTGCTCCTAGTGCTTGTAGAGGGTACCATTTCTTGTCCTaGAGAAAGGTGCTCCTAGTG +
Preference number: 5 (lower is better)
Translates to: WLLPFLVLEKGAPSACRGYHFLS*RKVLLV
Trigger: CACTAGGAGCACCTTTCTCAAGGACAAGAAATGGTA...CCCTCTACAAGCACTAGGAGCACCTTTCTCAAGGACAAGAAATGGTAGCAACCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
CDS-3UTR CAA 90 bp TGGTTGCTACCATTTCTTGTCCTTGAGAAAGGTGCTCCTAGTGCTTGTAGAGGGCACCAGAAGGAAGGATaGTTTCCTTCAACCAACCTT +
Preference number: 5 (lower is better)
Translates to: WLLPFLVLEKGAPSACRGHQKEG*FPSTNL
Trigger: AAGGTTGGTTGAAGGAAACAATCCTTCCTTCTGGTG...CCCTCTACAAGCACTAGGAGCACCTTTCTCAAGGACAAGAAATGGTAGCAACCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
CDS-3UTR CAA 90 bp TATGATGTGCCAGAGACCAGGAAATGCCAGAGGGATGTTTGTAACAAAGCTGCCCACCAGAAGGAAGGATaGTTTCCTTCAACCAACCTT +
Preference number: 5 (lower is better)
Translates to: YDVPETRKCQRDVCNKAAHQKEG*FPSTNL
Trigger: AAGGTTGGTTGAAGGAAACAATCCTTCCTTCTGGTG...GGCAGCTTTGTTACAAACATCCCTCTGGCATTTCCTGGTCTCTGGCACATCATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
CDS-3UTR CAA 90 bp ACCCCAAACTGCAGGTTTCCAATTGGTTATGATGTGCCAGAGACCAGGAAATGCCAACCAACCTTTTGGTaGCTACCATTTCTTGTCCTT +
Preference number: 5 (lower is better)
Translates to: TPNCRFPIGYDVPETRKCQPTFW*LPFLVL
Trigger: AAGGACAAGAAATGGTAGCAACCAAAAGGTTGGTTG...GCATTTCCTGGTCTCTGGCACATCATAACCAATTGGAAACCTGCAGTTTGGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
CDS-3UTR CAA 90 bp TGGTTGCTACCATTTCTTGTCCTTGAGAAAGGTGCTCCTAGTGCTTGTAGAGGGCAACCAACCTTTTGGTaGCTACCATTTCTTGTCCTT +
Preference number: 5 (lower is better)
Translates to: WLLPFLVLEKGAPSACRGQPTFW*LPFLVL
Trigger: AAGGACAAGAAATGGTAGCAACCAAAAGGTTGGTTG...CCCTCTACAAGCACTAGGAGCACCTTTCTCAAGGACAAGAAATGGTAGCAACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
CDS-3UTR CAA 90 bp TTCTTGAAATGTCACCTTAGGATGGAGTTGCAGGCCTCCCTGAATGCACCTGATCAACCAACCTTTTGGTaGCTACCATTTCTTGTCCTT +
Preference number: 5 (lower is better)
Translates to: FLKCHLRMELQASLNAPDQPTFW*LPFLVL
Trigger: AAGGACAAGAAATGGTAGCAACCAAAAGGTTGGTTG...ATCAGGTGCATTCAGGGAGGCCTGCAACTCCATCCTAAGGTGACATTTCAAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
CDS-3UTR CAA 90 bp TATGATGTGCCAGAGACCAGGAAATGCCAGAGGGATGTTTGTAACAAAGCTGCCCTTTTTGAGGCTGCCTaGGAAACAGCCTTGAATTTT +
Preference number: 5 (lower is better)
Translates to: YDVPETRKCQRDVCNKAALFEAA*ETALNF
Trigger: AAAATTCAAGGCTGTTTCCAAGGCAGCCTCAAAAAG...GGCAGCTTTGTTACAAACATCCCTCTGGCATTTCCTGGTCTCTGGCACATCATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
CDS-3UTR CAA 90 bp AAAGGCTCCCTCAACACCAACACTTCTGGAACAATGAAGACCTCAAAAATCAGCTTCTGTTTGAGGGGCTaGACACAGAAAGTTCCATCT +
Preference number: 5 (lower is better)
Translates to: KGSLNTNTSGTMKTSKISFCLRG*TQKVPS
Trigger: AGATGGAACTTTCTGTGTCAAGCCCCTCAAACAGAA...GCTGATTTTTGAGGTCTTCATTGTTCCAGAAGTGTTGGTGTTGAGGGAGCCTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000591615.1
CDS-3UTR CAA 90 bp CATTCCAGAGTCCCTGCAAAAGGTCTCGTGAGCTGCAGTTCATTGAGTGGCTTTTCAAAGTCATTGTTATaGTCACACTCCATACCTAGA +
Preference number: 5 (lower is better)
Translates to: HSRVPAKGLVSCSSLSGFSKSLL*SHSIPR
Trigger: TCTAGGTATGGAGTGTGACAATAACAATGACTTTGA...AAAGCCACTCAATGAACTGCAGCTCACGAGACCTTTTGCAGGGACTCTGGAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
CDS-3UTR CAA 90 bp CCATTTCTTGTCCTTGAGAAAGGTGCTCCTAGTGCTTGTAGAGGGAAACGCTACGCGATGTCAAAGTCATaGTTATTGTCACACTCCATA +
Preference number: 5 (lower is better)
Translates to: PFLVLEKGAPSACRGKRYAMSKS*LLSHSI
Trigger: TATGGAGTGTGACAATAACAATGACTTTGACATCGC...GTAGCGTTTCCCTCTACAAGCACTAGGAGCACCTTTCTCAAGGACAAGAAATGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
CDS-3UTR CAA 90 bp TGGTTGCTACCATTTCTTGTCCTTGAGAAAGGTGCTCCTAGTGCTTGTAGAGGGGCGATGTCAAAGTCATaGTTATTGTCACACTCCATA +
Preference number: 5 (lower is better)
Translates to: WLLPFLVLEKGAPSACRGAMSKS*LLSHSI
Trigger: TATGGAGTGTGACAATAACAATGACTTTGACATCGC...CCCTCTACAAGCACTAGGAGCACCTTTCTCAAGGACAAGAAATGGTAGCAACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
CDS-3UTR CAA 90 bp ATTGTGGTTACAGGTTGTAACAGCTGTCACAGGAGGGTAAAAAGTCTCCAGCATACTGCAGGTTTCCAATaGGTTATGATGTGCCAGAGA +
Preference number: 5 (lower is better)
Translates to: IVVTGCNSCHRRVKSLQHTAGFQ*VMMCQR
Trigger: TCTCTGGCACATCATAACCAATTGGAAACCTGCAGT...ATGCTGGAGACTTTTTACCCTCCTGTGACAGCTGTTACAACCTGTAACCACAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
CDS-3UTR CAA 90 bp TTCTTGAAATGTCACCTTAGGATGGAGTTGCAGGCCTCCCTGAATGCACCTGATCAACACATGTGTTTCTaGAAATGTCACCTTAGGATG +
Preference number: 5 (lower is better)
Translates to: FLKCHLRMELQASLNAPDQHMCF*KCHLRM
Trigger: CATCCTAAGGTGACATTTCAAGAAACACATGTGTTG...ATCAGGTGCATTCAGGGAGGCCTGCAACTCCATCCTAAGGTGACATTTCAAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
CDS-3UTR CAA 90 bp CATTTCTTGTCCTTGAGAAAGGTGCTCCTAGTGCTTGTAGAGGGAAACGCTACGCAACACATGTGTTTCTaGAAATGTCACCTTAGGATG +
Preference number: 5 (lower is better)
Translates to: HFLSLRKVLLVLVEGNATQHMCF*KCHLRM
Trigger: CATCCTAAGGTGACATTTCAAGAAACACATGTGTTG...CGTAGCGTTTCCCTCTACAAGCACTAGGAGCACCTTTCTCAAGGACAAGAAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269391.11
ENST00000647930.1
CDS-3UTR CAA 90 bp AGACTCCAGGAGCTCTTCCAGTCCTCTAGCAACAAGAGATCCCATACAACCAAGCAAATCAATAAAAGGTaGGTGTTAAGTGCCATGAAG +
Preference number: 5 (lower is better)
Translates to: RLQELFQSSSNKRSHTTKQINKR*VLSAMK
Trigger: CTTCATGGCACTTAACACCAACCTTTTATTGATTTG...CTTGGTTGTATGGGATCTCTTGTTGCTAGAGGACTGGAAGAGCTCCTGGAGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592271.1
CDS-3UTR CAA 90 bp GAGATCCCATACAACCAAGGAGGCTGCAGTTTGTCTTCTAGTGCATCTCTCTCAGGCTTTGTTCTAGGTTaGGGATACTACAGTAAAAAC +
Preference number: 5 (lower is better)
Translates to: EIPYNQGGCSLSSSASLSGFVLG*GYYSKN
Trigger: GTTTTTACTGTAGTATCCCAAACCTAGAACAAAGCC...TGAGAGAGATGCACTAGAAGACAAACTGCAGCCTCCTTGGTTGTATGGGATCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000592271.1
CDS-3UTR CAA 90 bp CCTGAACATCAATATACCGTGAGGACATTCCAGAGTCCCTGCAAAAGGTCTCGTTCAAAGTCATTGTTATaGTCACACTCCATACCTAGA +
Preference number: 5 (lower is better)
Translates to: PEHQYTVRTFQSPCKRSRSKSLL*SHSIPR
Trigger: TCTAGGTATGGAGTGTGACAATAACAATGACTTTGA...ACGAGACCTTTTGCAGGGACTCTGGAATGTCCTCACGGTATATTGATGTTCAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
CDS-3UTR CAA 90 bp TCTTGTTCTTTCATTTCTCAAGTCCTTTGCTCAGATAAAGGCTCCCTCAACACCTCCCTAAACCCAATGTaGGGAAATAAATCTTGTTCT +
Preference number: 5 (lower is better)
Translates to: SCSFISQVLCSDKGSLNTSLNPM*GNKSCS
Trigger: AGAACAAGATTTATTTCCCAACATTGGGTTTAGGGA...GGTGTTGAGGGAGCCTTTATCTGAGCAAAGGACTTGAGAAATGAAAGAACAAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591615.1
CDS CCA 90 bp AAGGAAAGAATAAAAGGAAGGAAGGACCCTAATACTAACAGTCTGTaGTCTTCAAATACTTACTACTTGTTTCTGTTTGAGGGGCTTGAC +
Preference number: 5 (lower is better)
Translates to: KERIKGRKDPNTNSL*SSNTYYLFLFEGLD
Trigger: GTCAAGCCCCTCAAACAGAAACAAGTAGTAAGTATTTGAAGACCACAGACTGTTAGTATTAGGGTCCTTCCTTCCTTTTATTCTTTCCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591615.1
CDS GCA 72 bp TTAGACGGGATGTCCACCTCCTCCACGCCCGCGTGCTaGCGGCTCGTCAGGGCCCCCATGGCCGCTGCGGCT +
Preference number: 6 (lower is better)
Translates to: LDGMSTSSTPAC*RLVRAPMAAAA
Trigger: AGCCGCAGCGGCCATGGGGGCCCTGACGAGCCGGCAGCACGCGGGCGTGGAGGAGGTGGACATCCCGTCTAA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000592271.1
ENST00000647930.1
CDS GCA 72 bp GAATTAGACGGGATGTCCACCTCCTCCACGCCCGCGTaGTGCCGGCTCGTCAGGGCCCCCATGGCCGCTGCG +
Preference number: 6 (lower is better)
Translates to: ELDGMSTSSTPA*CRLVRAPMAAA
Trigger: CGCAGCGGCCATGGGGGCCCTGACGAGCCGGCAGCACGCGGGCGTGGAGGAGGTGGACATCCCGTCTAATTC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000592271.1
ENST00000647930.1
CDS TCA 72 bp ACAGGGCCTCGTCTCAGAGTCCTCCAGGCTGCTGGATaGCAAGCGCCGGCGCTGGGCATTCCGACTGACGGC +
Preference number: 6 (lower is better)
Translates to: TGPRLRVLQAAG*QAPALGIPTDG
Trigger: GCCGTCAGTCGGAATGCCCAGCGCCGGCGCTTGTCATCCAGCAGCCTGGAGGACTCTGAGACGAGGCCCTGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000589317.1
ENST00000647930.1
CDS CCA 72 bp GTGGCCATCTCCAAGCACGTGAAGTGGAGGAACTGCTaGGGACGGGGTGAGGGGCCCGTTGAGGGCCTCCAG +
Preference number: 6 (lower is better)
Translates to: VAISKHVKWRNC*GRGEGPVEGLQ
Trigger: CTGGAGGCCCTCAACGGGCCCCTCACCCCGTCCCCAGCAGTTCCTCCACTTCACGTGCTTGGAGATGGCCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
CDS CCA 72 bp GAGTCCTCCAGGCTGCTGGATGACAAGCGCCGGCGCTaGGCATTCCGACTGACGGCATTGTCATCAGCCTGC +
Preference number: 6 (lower is better)
Translates to: ESSRLLDDKRRR*AFRLTALSSAC
Trigger: GCAGGCTGATGACAATGCCGTCAGTCGGAATGCCCAGCGCCGGCGCTTGTCATCCAGCAGCCTGGAGGACTC
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000589317.1
ENST00000647930.1
CDS TCA 72 bp TGCTGGATGACAAGCGCCGGCGCTGGGCATTCCGACTaGCGGCATTGTCATCAGCCTGCCAGGCACCAGGTA +
Preference number: 6 (lower is better)
Translates to: CWMTSAGAGHSD*RHCHQPARHQV
Trigger: TACCTGGTGCCTGGCAGGCTGATGACAATGCCGTCAGTCGGAATGCCCAGCGCCGGCGCTTGTCATCCAGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000589317.1
ENST00000647930.1
CDS CAA 72 bp TCTGCATCCTGCTCTCCAGCTGGGAGGCCAGCAAAGTaGCTGTCTGGAGACTCCGCTGGCAGCCCCTCTCCT +
Preference number: 6 (lower is better)
Translates to: SASCSPAGRPAK*LSGDSAGSPSP
Trigger: AGGAGAGGGGCTGCCAGCGGAGTCTCCAGACAGCAACTTTGCTGGCCTCCCAGCTGGAGAGCAGGATGCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269391.11
ENST00000591355.1
ENST00000592869.1
ENST00000647930.1
CDS TCA 72 bp TGCTGGATGACAAGCGCCGGCGCTGGGCATTCCGACTaGCGGCATTGTCATCAGCCTGCCAGGCACCTATTC +
Preference number: 6 (lower is better)
Translates to: CWMTSAGAGHSD*RHCHQPARHLF
Trigger: GAATAGGTGCCTGGCAGGCTGATGACAATGCCGTCAGTCGGAATGCCCAGCGCCGGCGCTTGTCATCCAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591355.1
CDS CAA 72 bp GACAAGCGCCGGCGCTGGGCATTCCGACTGACGGCATaGTCATCAGCCTGCCAGGCACCTATTCCTCAATGT +
Preference number: 6 (lower is better)
Translates to: DKRRRWAFRLTA*SSACQAPIPQC
Trigger: ACATTGAGGAATAGGTGCCTGGCAGGCTGATGACAATGCCGTCAGTCGGAATGCCCAGCGCCGGCGCTTGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591355.1
CDS TCA 72 bp GCTGCTGGCAGGGCCTTCTGGGGAGGAAATAGTGGATaGCAGAGGCGTCCCTGTGCAAGACGACTGGTCAAT +
Preference number: 6 (lower is better)
Translates to: AAGRAFWGGNSG*QRRPCARRLVN
Trigger: ATTGACCAGTCGTCTTGCACAGGGACGCCTCTGTCATCCACTATTTCCTCCCCAGAAGGCCCTGCCAGCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000592869.1
ENST00000647930.1
CDS GCA 72 bp CATGGAGGAGACGGTGTCAGTGCTGATCTGGGAGGATaGCATGGACATGACAGACTGGGCCAAGCTGCTGCT +
Preference number: 6 (lower is better)
Translates to: HGGDGVSADLGG*HGHDRLGQAAA
Trigger: AGCAGCAGCTTGGCCCAGTCTGTCATGTCCATGGCATCCTCCCAGATCAGCACTGACACCGTCTCCTCCATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000591355.1
ENST00000592869.1
ENST00000647930.1
CDS CCA 72 bp TCATCAGCCTGCCAGGCACCTATTCCTCAATGTTTATaGGGCAGGACTCCGGAGCTGCGGCAGGTAAGCAGA +
Preference number: 6 (lower is better)
Translates to: SSACQAPIPQCL*GRTPELRQVSR
Trigger: TCTGCTTACCTGCCGCAGCTCCGGAGTCCTGCCCCATAAACATTGAGGAATAGGTGCCTGGCAGGCTGATGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591355.1
CDS CCA 72 bp TCACTTTCTGGAGTCACACCACATTCCTGGGGGTTGTaGGGGGACACAACAGGACATGGAGCAAGCGCCAGT +
Preference number: 6 (lower is better)
Translates to: SLSGVTPHSWGL*GDTTGHGASAS
Trigger: ACTGGCGCTTGCTCCATGTCCTGTTGTGTCCCCCCACAACCCCCAGGAATGTGGTGTGACTCCAGAAAGTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000592869.1
CDS CAA 72 bp GCTGCGGCAGGTAAGCAGACCTCAGAGCACAGCTTATaGTCCAGTGCTTTCACGCTTGCGATGTCAAAGTCA +
Preference number: 6 (lower is better)
Translates to: AAAGKQTSEHSL*SSAFTLAMSKS
Trigger: TGACTTTGACATCGCAAGCGTGAAAGCACTGGACAATAAGCTGTGCTCTGAGGTCTGCTTACCTGCCGCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591355.1
CDS TCA 72 bp CGTCCCTGTGCAAGACGACTGGTCAATAGCTCCAGATaGCGACAAGGTGAGATTCTCACTTTCTGGAGTCAC +
Preference number: 6 (lower is better)
Translates to: RPCARRLVNSSR*RQGEILTFWSH
Trigger: GTGACTCCAGAAAGTGAGAATCTCACCTTGTCGTCATCTGGAGCTATTGACCAGTCGTCTTGCACAGGGACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000592869.1
ENST00000647930.1
CDS CCA 72 bp TTGTCACACTCCATACCTAGAAATGCGCACGTCCTCTaGCCTGTAACGGAGTTAATGCAGTTAGAGAGGGGC +
Preference number: 6 (lower is better)
Translates to: LSHSIPRNAHVL*PVTELMQLERG
Trigger: GCCCCTCTCTAACTGCATTAACTCCGTTACAGGCCAGAGGACGTGCGCATTTCTAGGTATGGAGTGTGACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589317.1
CDS CAA 72 bp CAGGCACCAGGTAAGCAGACCTCAGAGCACAGCTTATaGTCCAGTGCTTTCACGCTTGCGATGTCAAAGTCA +
Preference number: 6 (lower is better)
Translates to: QAPGKQTSEHSL*SSAFTLAMSKS
Trigger: TGACTTTGACATCGCAAGCGTGAAAGCACTGGACAATAAGCTGTGCTCTGAGGTCTGCTTACCTGGTGCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000589317.1
ENST00000647930.1
CDS CCA 72 bp GTGTGCTTCTCAAAAGTACCCAGCAGTACATGGCAATaGCCAAAATACTCGTCTCCTTCATCCACCACGGCA +
Preference number: 6 (lower is better)
Translates to: VCFSKVPSSTWQ*PKYSSPSSTTA
Trigger: TGCCGTGGTGGATGAAGGAGACGAGTATTTTGGCCATTGCCATGTACTGCTGGGTACTTTTGAGAAGCACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000591615.1
ENST00000647930.1
CDS CCA 72 bp CCATCTGTGTGCTTCTCAAAAGTACCCAGCAGTACATaGCAATGGCCAAAATACTCGTCTCCTTCATCCACC +
Preference number: 6 (lower is better)
Translates to: PSVCFSKVPSST*QWPKYSSPSST
Trigger: GGTGGATGAAGGAGACGAGTATTTTGGCCATTGCCATGTACTGCTGGGTACTTTTGAGAAGCACACAGATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000591615.1
ENST00000647930.1
CDS CAA 90 bp CACAGCTTATTGTCCAGTGCTTTCACGCTTGCGATGTCAAAGTCATaGTTATTGTCACACTCCATACCTAGAAATGCGCACGTCCTCTGG +
Preference number: 6 (lower is better)
Translates to: HSLLSSAFTLAMSKS*LLSHSIPRNAHVLW
Trigger: CCAGAGGACGTGCGCATTTCTAGGTATGGAGTGTGACAATAACAATGACTTTGACATCGCAAGCGTGAAAGCACTGGACAATAAGCTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000589317.1
ENST00000591355.1
ENST00000647930.1
CDS TCA 72 bp TTGAATTGGCCACTTAAGCTCCAAGTAGGAGTAAACTaGTTACAGCCATACCACAACTGGTCTGTTCCCCAG +
Preference number: 6 (lower is better)
Translates to: LNWPLKLQVGVN*LQPYHNWSVPQ
Trigger: CTGGGGAACAGACCAGTTGTGGTATGGCTGTAATCAGTTTACTCCTACTTGGAGCTTAAGTGGCCAATTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592271.1
CDS CAA 72 bp CTGACCCCGTCTACTACTTGTTTCTGTTTGAGGGGCTaGACACAGAAAGTTCCATCTGTGTGCTTCTCAAAA +
Preference number: 6 (lower is better)
Translates to: LTPSTTCFCLRG*TQKVPSVCFSK
Trigger: TTTTGAGAAGCACACAGATGGAACTTTCTGTGTCAAGCCCCTCAAACAGAAACAAGTAGTAGACGGGGTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000647930.1
CDS CAA 72 bp CCTCAGAGCACAGCTTATTGTCCAGTGCTTTCACGCTaGCGATGTCAAAGTCATTGTTATTGTCACACTCCA +
Preference number: 6 (lower is better)
Translates to: PQSTAYCPVLSR*RCQSHCYCHTP
Trigger: TGGAGTGTGACAATAACAATGACTTTGACATCGCAAGCGTGAAAGCACTGGACAATAAGCTGTGCTCTGAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000589317.1
ENST00000591355.1
ENST00000647930.1
CDS CAA 90 bp GTAAGCAGACCTCAGAGCACAGCTTATTGTCCAGTGCTTTCACGCTaGCGATGTCAAAGTCATTGTTATTGTCACACTCCATACCTAGAA +
Preference number: 6 (lower is better)
Translates to: VSRPQSTAYCPVLSR*RCQSHCYCHTPYLE
Trigger: TTCTAGGTATGGAGTGTGACAATAACAATGACTTTGACATCGCAAGCGTGAAAGCACTGGACAATAAGCTGTGCTCTGAGGTCTGCTTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000589317.1
ENST00000591355.1
ENST00000647930.1
CDS GCA 72 bp CTCAGAGCACAGCTTATTGTCCAGTGCTTTCACGCTTaGGATGTCAAAGTCATTGTTATTGTCACACTCCAT +
Preference number: 6 (lower is better)
Translates to: LRAQLIVQCFHA*DVKVIVIVTLH
Trigger: ATGGAGTGTGACAATAACAATGACTTTGACATCGCAAGCGTGAAAGCACTGGACAATAAGCTGTGCTCTGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000589317.1
ENST00000591355.1
ENST00000647930.1
CDS CAA 72 bp TTGTCCAGTGCTTTCACGCTTGCGATGTCAAAGTCATaGTTATTGTCACACTCCATACCTAGAAATGCGCAC +
Preference number: 6 (lower is better)
Translates to: LSSAFTLAMSKS*LLSHSIPRNAH
Trigger: GTGCGCATTTCTAGGTATGGAGTGTGACAATAACAATGACTTTGACATCGCAAGCGTGAAAGCACTGGACAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269391.11
ENST00000319945.10
ENST00000589317.1
ENST00000591355.1
ENST00000647930.1
CDS CAA 90 bp GTCTGTGGTCTTCAAATACTTACTACTTGTTTCTGTTTGAGGGGCTaGACACAGAAAGTTCCATCTGTGTGCTTCTCAAAAGTACCCAGC +
Preference number: 6 (lower is better)
Translates to: VCGLQILTTCFCLRG*TQKVPSVCFSKVPS
Trigger: GCTGGGTACTTTTGAGAAGCACACAGATGGAACTTTCTGTGTCAAGCCCCTCAAACAGAAACAAGTAGTAAGTATTTGAAGACCACAGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591615.1
CDS CAA 90 bp AAGGACCCTAATACTAACAGTCTGTGGTCTTCAAATACTTACTACTaGTTTCTGTTTGAGGGGCTTGACACAGAAAGTTCCATCTGTGTG +
Preference number: 6 (lower is better)
Translates to: KDPNTNSLWSSNTYY*FLFEGLDTESSICV
Trigger: CACACAGATGGAACTTTCTGTGTCAAGCCCCTCAAACAGAAACAAGTAGTAAGTATTTGAAGACCACAGACTGTTAGTATTAGGGTCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591615.1
CDS CAA 90 bp ATACTAACAGTCTGTGGTCTTCAAATACTTACTACTTGTTTCTGTTaGAGGGGCTTGACACAGAAAGTTCCATCTGTGTGCTTCTCAAAA +
Preference number: 6 (lower is better)
Translates to: ILTVCGLQILTTCFC*RGLTQKVPSVCFSK
Trigger: TTTTGAGAAGCACACAGATGGAACTTTCTGTGTCAAGCCCCTCAAACAGAAACAAGTAGTAAGTATTTGAAGACCACAGACTGTTAGTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591615.1
CDS CAA 72 bp CTTCAAATACTTACTACTTGTTTCTGTTTGAGGGGCTaGACACAGAAAGTTCCATCTGTGTGCTTCTCAAAA +
Preference number: 6 (lower is better)
Translates to: LQILTTCFCLRG*TQKVPSVCFSK
Trigger: TTTTGAGAAGCACACAGATGGAACTTTCTGTGTCAAGCCCCTCAAACAGAAACAAGTAGTAAGTATTTGAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591615.1