RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RNF144A (Homo sapiens)

Ensembl gene IDs: ENSG00000151692

Ensembl transcript IDs: ENST00000320892.11, ENST00000416587.5, ENST00000432850.1, ENST00000433456.1, ENST00000467276.5, ENST00000471060.1, ENST00000480970.1

Found 329 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TGCGATGGGCAGCAGCAATTTCAGGCAGGAAGGATGAGCATATGGTaGAGGCGTGTCCTGTGGGCCACTGGACACAGGGCCACAGGCCTC +
Preference number: 1 (lower is better)
Translates to: CDGQQQFQAGRMSIW*RRVLWATGHRATGL
Trigger: GAGGCCTGTGGCCCTGTGTCCAGTGGCCCACAGGACACGCCTCCACCATATGCTCATCCTTCCTGCCTGAAATTGCTGCTGCCCATCGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320892.11
3UTR CCA 90 bp GCCACAGGCCTCCCATGTGTGCTGGGCATGTTAAAGGGCAGTGGCTaGACAGCTGCATCCACATATCACAGGCTGAGGGCTCAAGCCCAG +
Preference number: 1 (lower is better)
Translates to: ATGLPCVLGMLKGSG*TAASTYHRLRAQAQ
Trigger: CTGGGCTTGAGCCCTCAGCCTGTGATATGTGGATGCAGCTGTCCAGCCACTGCCCTTTAACATGCCCAGCACACATGGGAGGCCTGTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320892.11
3UTR CCA 90 bp CAGGGCCACAGGCCTCCCATGTGTGCTGGGCATGTTAAAGGGCAGTaGCTGGACAGCTGCATCCACATATCACAGGCTGAGGGCTCAAGC +
Preference number: 1 (lower is better)
Translates to: QGHRPPMCAGHVKGQ*LDSCIHISQAEGSS
Trigger: GCTTGAGCCCTCAGCCTGTGATATGTGGATGCAGCTGTCCAGCCACTGCCCTTTAACATGCCCAGCACACATGGGAGGCCTGTGGCCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320892.11
3UTR CCA 90 bp TCATGCGATGGGCAGCAGCAATTTCAGGCAGGAAGGATGAGCATATaGTGGAGGCGTGTCCTGTGGGCCACTGGACACAGGGCCACAGGC +
Preference number: 1 (lower is better)
Translates to: SCDGQQQFQAGRMSI*WRRVLWATGHRATG
Trigger: GCCTGTGGCCCTGTGTCCAGTGGCCCACAGGACACGCCTCCACCATATGCTCATCCTTCCTGCCTGAAATTGCTGCTGCCCATCGCATGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320892.11
3UTR GCA 90 bp CCTCCCATGTGTGCTGGGCATGTTAAAGGGCAGTGGCTGGACAGCTaGATCCACATATCACAGGCTGAGGGCTCAAGCCCAGCCAATGAC +
Preference number: 1 (lower is better)
Translates to: PPMCAGHVKGQWLDS*IHISQAEGSSPAND
Trigger: GTCATTGGCTGGGCTTGAGCCCTCAGCCTGTGATATGTGGATGCAGCTGTCCAGCCACTGCCCTTTAACATGCCCAGCACACATGGGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320892.11
3UTR CCA 90 bp ACTCTCATCCTAAGGACGGGGGTGCTACTGTGTGGGCTCATGCGATaGGCAGCAGCAATTTCAGGCAGGAAGGATGAGCATATGGTGGAG +
Preference number: 1 (lower is better)
Translates to: TLILRTGVLLCGLMR*AAAISGRKDEHMVE
Trigger: CTCCACCATATGCTCATCCTTCCTGCCTGAAATTGCTGCTGCCCATCGCATGAGCCCACACAGTAGCACCCCCGTCCTTAGGATGAGAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000320892.11
3UTR GCA 90 bp CTTAGGCCATCCCCAGACATGCCTAGTCTACCACAGAGAGAAAGCTaGCTGGTGCACTTCTCACAGCACCTCCCTGTCATCTGCAGAGAT +
Preference number: 1 (lower is better)
Translates to: LRPSPDMPSLPQRES*LVHFSQHLPVICRD
Trigger: ATCTCTGCAGATGACAGGGAGGTGCTGTGAGAAGTGCACCAGGCAGCTTTCTCTCTGTGGTAGACTAGGCATGTCTGGGGATGGCCTAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320892.11
3UTR CCA 90 bp GGCCATCCCCAGACATGCCTAGTCTACCACAGAGAGAAAGCTGCCTaGTGCACTTCTCACAGCACCTCCCTGTCATCTGCAGAGATTGAT +
Preference number: 1 (lower is better)
Translates to: GHPQTCLVYHREKAA*CTSHSTSLSSAEID
Trigger: ATCAATCTCTGCAGATGACAGGGAGGTGCTGTGAGAAGTGCACCAGGCAGCTTTCTCTCTGTGGTAGACTAGGCATGTCTGGGGATGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320892.11
3UTR CCA 90 bp AGGCATGGGGCATGTAGCTACCCCTCACTGAAGGCTCCGGAACTGTaGAAGACAGAATTGCACAAATCAAAGGAAGGGTGGAGACCCTGG +
Preference number: 1 (lower is better)
Translates to: RHGACSYPSLKAPEL*KTELHKSKEGWRPW
Trigger: CCAGGGTCTCCACCCTTCCTTTGATTTGTGCAATTCTGTCTTCCACAGTTCCGGAGCCTTCAGTGAGGGGTAGCTACATGCCCCATGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320892.11
3UTR TCA 90 bp CTCTGCTACGTGGACATCTATGGTGACTGCATCTTTGCAAGGTGCTaGCCTCCTATGAGGCTGCAAGCTCATCTGGCTGGGCTATGGACT +
Preference number: 1 (lower is better)
Translates to: LCYVDIYGDCIFARC*PPMRLQAHLAGLWT
Trigger: AGTCCATAGCCCAGCCAGATGAGCTTGCAGCCTCATAGGAGGTCAGCACCTTGCAAAGATGCAGTCACCATAGATGTCCACGTAGCAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320892.11
3UTR GCA 90 bp CATCCCCAGACATGCCTAGTCTACCACAGAGAGAAAGCTGCCTGGTaGACTTCTCACAGCACCTCCCTGTCATCTGCAGAGATTGATCTG +
Preference number: 1 (lower is better)
Translates to: HPQTCLVYHREKAAW*TSHSTSLSSAEIDL
Trigger: CAGATCAATCTCTGCAGATGACAGGGAGGTGCTGTGAGAAGTGCACCAGGCAGCTTTCTCTCTGTGGTAGACTAGGCATGTCTGGGGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320892.11
3UTR GCA 90 bp GCATGCTTCATACAAAAAGTCAGAGCCAGTAGGTGCCAATTTGACTaGCCCTGGCTGGCCCCAGAATCTCTGTGGTCCCTATCTGGGTTG +
Preference number: 1 (lower is better)
Translates to: ACFIQKVRASRCQFD*PWLAPESLWSLSGL
Trigger: CAACCCAGATAGGGACCACAGAGATTCTGGGGCCAGCCAGGGGCAGTCAAATTGGCACCTACTGGCTCTGACTTTTTGTATGAAGCATGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000320892.11
3UTR CCA 90 bp AGAGGTGAAGGCACAAGGATGGCTGGGGCTACAGATGTGCATGACTaGGCCAGAGACTCTTCCAACAGAACAGCCTGTCCCTCTAGAAAT +
Preference number: 1 (lower is better)
Translates to: RGEGTRMAGATDVHD*ARDSSNRTACPSRN
Trigger: ATTTCTAGAGGGACAGGCTGTTCTGTTGGAAGAGTCTCTGGCCCAGTCATGCACATCTGTAGCCCCAGCCATCCTTGTGCCTTCACCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320892.11
3UTR TCA 90 bp TGGACATCTATGGTGACTGCATCTTTGCAAGGTGCTGACCTCCTATaGGGCTGCAAGCTCATCTGGCTGGGCTATGGACTACACAGCAGA +
Preference number: 1 (lower is better)
Translates to: WTSMVTASLQGADLL*GCKLIWLGYGLHSR
Trigger: TCTGCTGTGTAGTCCATAGCCCAGCCAGATGAGCTTGCAGCCTCATAGGAGGTCAGCACCTTGCAAAGATGCAGTCACCATAGATGTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320892.11
3UTR GCA 90 bp TCTAGAAGCCAAGGAGCAGAAAGTCTCTTAGGCCATCCCCAGACATaGCTAGTCTACCACAGAGAGAAAGCTGCCTGGTGCACTTCTCAC +
Preference number: 1 (lower is better)
Translates to: SRSQGAESLLGHPQT*LVYHREKAAWCTSH
Trigger: GTGAGAAGTGCACCAGGCAGCTTTCTCTCTGTGGTAGACTAGGCATGTCTGGGGATGGCCTAAGAGACTTTCTGCTCCTTGGCTTCTAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320892.11
3UTR CCA 90 bp AGTAGGTGCCAATTTGACTGCCCCTGGCTGGCCCCAGAATCTCTGTaGTCCCTATCTGGGTTGAACTACGTGCTTGTGAAACACATCAGA +
Preference number: 1 (lower is better)
Translates to: SRCQFDCPWLAPESL*SLSGLNYVLVKHIR
Trigger: TCTGATGTGTTTCACAAGCACGTAGTTCAACCCAGATAGGGACCACAGAGATTCTGGGGCCAGCCAGGGGCAGTCAAATTGGCACCTACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320892.11
3UTR TCA 90 bp CTACATCTGCGGATCAATGAGGCTGCTTTCTTCTTACTGTCTATCTaGAGACTGAGGCCAGAGGCCAGACGGCAGCAATTCGGAGGAGAA +
Preference number: 1 (lower is better)
Translates to: LHLRINEAAFFLLSI*RLRPEARRQQFGGE
Trigger: TTCTCCTCCGAATTGCTGCCGTCTGGCCTCTGGCCTCAGTCTTCAGATAGACAGTAAGAAGAAAGCAGCCTCATTGATCCGCAGATGTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320892.11
3UTR TCA 90 bp AGAAGGAAAGAAAGGGCAGGCATGGGGCATGTAGCTACCCCTCACTaGAGGCTCCGGAACTGTGGAAGACAGAATTGCACAAATCAAAGG +
Preference number: 1 (lower is better)
Translates to: RRKERAGMGHVATPH*RLRNCGRQNCTNQR
Trigger: CCTTTGATTTGTGCAATTCTGTCTTCCACAGTTCCGGAGCCTTCAGTGAGGGGTAGCTACATGCCCCATGCCTGCCCTTTCTTTCCTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320892.11
3UTR TCA 90 bp TTATCTCAGATCCTAAGTCAGTCTCTGCTACGTGGACATCTATGGTaGCTGCATCTTTGCAAGGTGCTGACCTCCTATGAGGCTGCAAGC +
Preference number: 1 (lower is better)
Translates to: LSQILSQSLLRGHLW*LHLCKVLTSYEAAS
Trigger: GCTTGCAGCCTCATAGGAGGTCAGCACCTTGCAAAGATGCAGTCACCATAGATGTCCACGTAGCAGAGACTGACTTAGGATCTGAGATAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320892.11
3UTR CCA 90 bp GCAATCCGATGCTTTATCTCAGATCCTAAGTCAGTCTCTGCTACGTaGACATCTATGGTGACTGCATCTTTGCAAGGTGCTGACCTCCTA +
Preference number: 1 (lower is better)
Translates to: AIRCFISDPKSVSAT*TSMVTASLQGADLL
Trigger: TAGGAGGTCAGCACCTTGCAAAGATGCAGTCACCATAGATGTCCACGTAGCAGAGACTGACTTAGGATCTGAGATAAAGCATCGGATTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320892.11
3UTR GCA 90 bp TACTGGGGAATGATGGCAAGATCAAAGTCCAAACCCAGGGCCATCTaGCTGTGTGCTATTTCCATTTTACATCAAGCAGGGTTCATACTG +
Preference number: 1 (lower is better)
Translates to: YWGMMARSKSKPRAI*LCAISILHQAGFIL
Trigger: CAGTATGAACCCTGCTTGATGTAAAATGGAAATAGCACACAGGCAGATGGCCCTGGGTTTGGACTTTGATCTTGCCATCATTCCCCAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320892.11
3UTR GCA 90 bp TGGTGGAATAATGTGTATGTGTCCTTATTAATCCCTGCATCCTGCTaGCATGGAAATGGTCACAGACAGCCCTGTAAAAGATCAAGTGGT +
Preference number: 1 (lower is better)
Translates to: WWNNVYVSLLIPASC*HGNGHRQPCKRSSG
Trigger: ACCACTTGATCTTTTACAGGGCTGTCTGTGACCATTTCCATGGCAGCAGGATGCAGGGATTAATAAGGACACATACACATTATTCCACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320892.11
3UTR GCA 90 bp GTTGAGGAGGAAGAACTAATTTGGACAGTTATTCCTGCAATCCGATaGTTTATCTCAGATCCTAAGTCAGTCTCTGCTACGTGGACATCT +
Preference number: 1 (lower is better)
Translates to: VEEEELIWTVIPAIR*FISDPKSVSATWTS
Trigger: AGATGTCCACGTAGCAGAGACTGACTTAGGATCTGAGATAAAGCATCGGATTGCAGGAATAACTGTCCAAATTAGTTCTTCCTCCTCAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320892.11
3UTR GCA 90 bp AATTGGTGGAATAATGTGTATGTGTCCTTATTAATCCCTGCATCCTaGTGCCATGGAAATGGTCACAGACAGCCCTGTAAAAGATCAAGT +
Preference number: 1 (lower is better)
Translates to: NWWNNVYVSLLIPAS*CHGNGHRQPCKRSS
Trigger: ACTTGATCTTTTACAGGGCTGTCTGTGACCATTTCCATGGCAGCAGGATGCAGGGATTAATAAGGACACATACACATTATTCCACCAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320892.11
3UTR CCA 90 bp CCACAGGTCCTGTGTTCTAATCAGGAACTGGCCTGTGCCCTAAACTaGTTTTATGGAATAATATGTTGTCAAGATCATTTGTTCCCCTTT +
Preference number: 1 (lower is better)
Translates to: PQVLCSNQELACALN*FYGIICCQDHLFPF
Trigger: AAAGGGGAACAAATGATCTTGACAACATATTATTCCATAAAACCAGTTTAGGGCACAGGCCAGTTCCTGATTAGAACACAGGACCTGTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320892.11
3UTR CCA 90 bp TTCTCTTTAAAGAATACACTTTCTCCACTTTTCAAAGTCAATTGGTaGAATAATGTGTATGTGTCCTTATTAATCCCTGCATCCTGCTGC +
Preference number: 1 (lower is better)
Translates to: FSLKNTLSPLFKVNW*NNVYVSLLIPASCC
Trigger: GCAGCAGGATGCAGGGATTAATAAGGACACATACACATTATTCCACCAATTGACTTTGAAAAGTGGAGAAAGTGTATTCTTTAAAGAGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320892.11
3UTR CAA 90 bp GTCCTCACTGGCCACCCACCCTGGGCGGCAGTACAGCAGCCATGGTaGTCTAAGGGCCTTCGCCCCTTACTCCCCAGGATTAAAGGCCTC +
Preference number: 2 (lower is better)
Translates to: VLTGHPPWAAVQQPW*SKGLRPLLPRIKGL
Trigger: GAGGCCTTTAATCCTGGGGAGTAAGGGGCGAAGGCCCTTAGACAACCATGGCTGCTGTACTGCCGCCCAGGGTGGGTGGCCAGTGAGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320892.11
3UTR CAA 90 bp CTGCCTGGTGCACTTCTCACAGCACCTCCCTGTCATCTGCAGAGATaGATCTGTGGGGATGTGCGCTACCCACACCTGCCTCCCCTCCCC +
Preference number: 2 (lower is better)
Translates to: LPGALLTAPPCHLQR*ICGDVRYPHLPPLP
Trigger: GGGGAGGGGAGGCAGGTGTGGGTAGCGCACATCCCCACAGATCAATCTCTGCAGATGACAGGGAGGTGCTGTGAGAAGTGCACCAGGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320892.11
3UTR-3UTR CCA 90 bp AGCAGCCATGGTTGTCTAAGGGCCTTCGCCCCTTACTCCCCAGGATTAAAGGCCCCAATGACTCCCGCGTaGAGTTGCCACCCACCTCCA +
Preference number: 2 (lower is better)
Translates to: SSHGCLRAFAPYSPGLKAPMTPA*SCHPPP
Trigger: TGGAGGTGGGTGGCAACTCCACGCGGGAGTCATTGG...GGCCTTTAATCCTGGGGAGTAAGGGGCGAAGGCCCTTAGACAACCATGGCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000320892.11
3UTR-3UTR CCA 90 bp AAGGTGCTGACCTCCTATGAGGCTGCAAGCTCATCTGGCTGGGCTATGGACTACTGTCCTGTGGGCCACTaGACACAGGGCCACAGGCCT +
Preference number: 2 (lower is better)
Translates to: KVLTSYEAASSSGWAMDYCPVGH*TQGHRP
Trigger: AGGCCTGTGGCCCTGTGTCCAGTGGCCCACAGGACA...GTAGTCCATAGCCCAGCCAGATGAGCTTGCAGCCTCATAGGAGGTCAGCACCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320892.11
3UTR-3UTR TCA 90 bp AGGGCCACAGGCCTCCCATGTGTGCTGGGCATGTTAAAGGGCAGTGGCTGGACATCCAGCCTGACACTGTaGAGCTCAATGGGGCACATA +
Preference number: 2 (lower is better)
Translates to: RATGLPCVLGMLKGSGWTSSLTL*SSMGHI
Trigger: TATGTGCCCCATTGAGCTTCACAGTGTCAGGCTGGA...TGTCCAGCCACTGCCCTTTAACATGCCCAGCACACATGGGAGGCCTGTGGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320892.11
3UTR-3UTR TCA 90 bp AGCCCTGGGGATGCAGCCTTTCCAAAGGCTCTGACTCTCATCCTAAGGACGGGGTTCAGGCAGGAAGGATaGGCATATGGTGGAGGCGTG +
Preference number: 2 (lower is better)
Translates to: SPGDAAFPKALTLILRTGFRQEG*AYGGGV
Trigger: CACGCCTCCACCATATGCTCATCCTTCCTGCCTGAA...CCCCGTCCTTAGGATGAGAGTCAGAGCCTTTGGAAAGGCTGCATCCCCAGGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320892.11
3UTR-3UTR TCA 90 bp AGCCCTGGGGATGCAGCCTTTCCAAAGGCTCTGACTCTCATCCTAAGGACGGGGGTCATCTGCAGAGATTaGTCTGTGGGGATGTGCGCT +
Preference number: 2 (lower is better)
Translates to: SPGDAAFPKALTLILRTGVICRD*SVGMCA
Trigger: AGCGCACATCCCCACAGATCAATCTCTGCAGATGAC...CCCCGTCCTTAGGATGAGAGTCAGAGCCTTTGGAAAGGCTGCATCCCCAGGGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000320892.11
3UTR-3UTR CCA 90 bp AAGGTGCTGACCTCCTATGAGGCTGCAAGCTCATCTGGCTGGGCTATGGACTACAGGATGAGCATATGGTaGAGGCGTGTCCTGTGGGCC +
Preference number: 2 (lower is better)
Translates to: KVLTSYEAASSSGWAMDYRMSIW*RRVLWA
Trigger: GGCCCACAGGACACGCCTCCACCATATGCTCATCCT...GTAGTCCATAGCCCAGCCAGATGAGCTTGCAGCCTCATAGGAGGTCAGCACCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320892.11
3UTR-3UTR CCA 90 bp AAGGTGCTGACCTCCTATGAGGCTGCAAGCTCATCTGGCTGGGCTATGGACTACTTGACTGCCCCTGGCTaGCCCCAGAATCTCTGTGGT +
Preference number: 2 (lower is better)
Translates to: KVLTSYEAASSSGWAMDYLTAPG*PQNLCG
Trigger: ACCACAGAGATTCTGGGGCCAGCCAGGGGCAGTCAA...GTAGTCCATAGCCCAGCCAGATGAGCTTGCAGCCTCATAGGAGGTCAGCACCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320892.11
3UTR CAA 90 bp GACTGCCCCTGGCTGGCCCCAGAATCTCTGTGGTCCCTATCTGGGTaGAACTACGTGCTTGTGAAACACATCAGAGGTGAAGGCACAAGG +
Preference number: 2 (lower is better)
Translates to: DCPWLAPESLWSLSG*NYVLVKHIRGEGTR
Trigger: CCTTGTGCCTTCACCTCTGATGTGTTTCACAAGCACGTAGTTCAACCCAGATAGGGACCACAGAGATTCTGGGGCCAGCCAGGGGCAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320892.11
3UTR-3UTR CCA 90 bp TCCAAAGGCTCTGACTCTCATCCTAAGGACGGGGGTGCTACTGTGTGGGCTCATGCGTTTTCTGCTACCTaGGAGAGAAGGGATGAGGCC +
Preference number: 2 (lower is better)
Translates to: SKGSDSHPKDGGATVWAHAFSAT*ERRDEA
Trigger: GGCCTCATCCCTTCTCTCCCAGGTAGCAGAAAACGC...ATGAGCCCACACAGTAGCACCCCCGTCCTTAGGATGAGAGTCAGAGCCTTTGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000320892.11
3UTR-3UTR TCA 90 bp TTATGCCGCTTCACAGGAATAAGTCCGTCCACTCAACGCAGAACTCCCCAGGTTTCACGGCGTCCAGCCTaGCACTGTGAAGCTCAATGG +
Preference number: 2 (lower is better)
Translates to: LCRFTGISPSTQRRTPQVSRRPA*HCEAQW
Trigger: CCATTGAGCTTCACAGTGTCAGGCTGGACGCCGTGA...AACCTGGGGAGTTCTGCGTTGAGTGGACGGACTTATTCCTGTGAAGCGGCATAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320892.11
3UTR-3UTR CCA 90 bp AAGGTGCTGACCTCCTATGAGGCTGCAAGCTCATCTGGCTGGGCTATGGACTACGCAGAGATTGATCTGTaGGGATGTGCGCTACCCACA +
Preference number: 2 (lower is better)
Translates to: KVLTSYEAASSSGWAMDYAEIDL*GCALPT
Trigger: TGTGGGTAGCGCACATCCCCACAGATCAATCTCTGC...GTAGTCCATAGCCCAGCCAGATGAGCTTGCAGCCTCATAGGAGGTCAGCACCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320892.11
3UTR-3UTR CCA 90 bp GGCCAGAGGCCAGACGGCAGCAATTCGGAGGAGAACCATTGCCGAGCAAAGCAGACTTCTCTGACAACATaGTGCCATCTAGAAGCCAAG +
Preference number: 2 (lower is better)
Translates to: GQRPDGSNSEENHCRAKQTSLTT*CHLEAK
Trigger: CTTGGCTTCTAGATGGCACCATGTTGTCAGAGAAGT...CTGCTTTGCTCGGCAATGGTTCTCCTCCGAATTGCTGCCGTCTGGCCTCTGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320892.11
3UTR-3UTR TCA 90 bp TCCAAAGGCTCTGACTCTCATCCTAAGGACGGGGGTGCTACTGTGTGGGCTCATATGAGGCCCATGAGCTaGGCTGAATCACCAAAGAGA +
Preference number: 2 (lower is better)
Translates to: SKGSDSHPKDGGATVWAHMRPMS*AESPKR
Trigger: TCTCTTTGGTGATTCAGCTCAGCTCATGGGCCTCAT...ATGAGCCCACACAGTAGCACCCCCGTCCTTAGGATGAGAGTCAGAGCCTTTGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000320892.11
3UTR-3UTR TCA 90 bp AATGGAGACAAATTATGCCGCTTCACAGGAATAAGTCCGTCCACTCAACGCAGACTCAAGCCCAGCCAATaGCTCCCGCGTGGAGTTGCC +
Preference number: 2 (lower is better)
Translates to: NGDKLCRFTGISPSTQRRLKPSQ*LPRGVA
Trigger: GGCAACTCCACGCGGGAGTCATTGGCTGGGCTTGAG...TCTGCGTTGAGTGGACGGACTTATTCCTGTGAAGCGGCATAATTTGTCTCCATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320892.11
3UTR-3UTR CCA 90 bp GGGGATGCAGCCTTTCCAAAGGCTCTGACTCTCATCCTAAGGACGGGGGTGCTATTAAAGGGCAGTGGCTaGACAGCTGCATCCACATAT +
Preference number: 2 (lower is better)
Translates to: GDAAFPKALTLILRTGVLLKGSG*TAASTY
Trigger: ATATGTGGATGCAGCTGTCCAGCCACTGCCCTTTAA...TAGCACCCCCGTCCTTAGGATGAGAGTCAGAGCCTTTGGAAAGGCTGCATCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000320892.11
3UTR-3UTR TCA 90 bp CCATGGTTGTCTAAGGGCCTTCGCCCCTTACTCCCCAGGATTAAAGGCCTCTTACCTCAGCGAACATTGTaGCATAGGTCCCTGAAATCA +
Preference number: 2 (lower is better)
Translates to: PWLSKGLRPLLPRIKGLLPQRTL*HRSLKS
Trigger: TGATTTCAGGGACCTATGTCACAATGTTCGCTGAGG...TAAGAGGCCTTTAATCCTGGGGAGTAAGGGGCGAAGGCCCTTAGACAACCATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320892.11
3UTR-3UTR TCA 90 bp GGGGATGCAGCCTTTCCAAAGGCTCTGACTCTCATCCTAAGGACGGGGGTGCTACACGTTAAAACGAAGTaGAATGGGAGGTTCTTTTCC +
Preference number: 2 (lower is better)
Translates to: GDAAFPKALTLILRTGVLHVKTK*NGRFFS
Trigger: GGAAAAGAACCTCCCATTTCACTTCGTTTTAACGTG...TAGCACCCCCGTCCTTAGGATGAGAGTCAGAGCCTTTGGAAAGGCTGCATCCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000320892.11
3UTR-3UTR TCA 90 bp AATGGAGACAAATTATGCCGCTTCACAGGAATAAGTCCGTCCACTCAACGCAGACCACATATCACAGGCTaGGGGCTCAAGCCCAGCCAA +
Preference number: 2 (lower is better)
Translates to: NGDKLCRFTGISPSTQRRPHITG*GLKPSQ
Trigger: TTGGCTGGGCTTGAGCCCTCAGCCTGTGATATGTGG...TCTGCGTTGAGTGGACGGACTTATTCCTGTGAAGCGGCATAATTTGTCTCCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320892.11
3UTR-3UTR GCA 90 bp AAGGTGCTGACCTCCTATGAGGCTGCAAGCTCATCTGGCTGGGCTATGGACTACCTCTTAGTGAACACATaGCATATGCTTCTGGGGCTT +
Preference number: 2 (lower is better)
Translates to: KVLTSYEAASSSGWAMDYLLVNT*HMLLGL
Trigger: AAGCCCCAGAAGCATATGGCATGTGTTCACTAAGAG...GTAGTCCATAGCCCAGCCAGATGAGCTTGCAGCCTCATAGGAGGTCAGCACCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320892.11
3UTR-3UTR CCA 90 bp AGCCCTGGGGATGCAGCCTTTCCAAAGGCTCTGACTCTCATCCTAAGGACGGGGGTGCTTCTCTCAAGCTaGAATAATCAGATTCTGTCT +
Preference number: 2 (lower is better)
Translates to: SPGDAAFPKALTLILRTGVLLSS*NNQILS
Trigger: AGACAGAATCTGATTATTCCAGCTTGAGAGAAGCAC...CCCCGTCCTTAGGATGAGAGTCAGAGCCTTTGGAAAGGCTGCATCCCCAGGGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000320892.11
3UTR CAA 90 bp AGACTGAGGCCAGAGGCCAGACGGCAGCAATTCGGAGGAGAACCATaGCCGAGCAAAGCAGTGGGATTGAATACAATAAAAAGCGTTTTC +
Preference number: 2 (lower is better)
Translates to: RLRPEARRQQFGGEP*PSKAVGLNTIKSVF
Trigger: GAAAACGCTTTTTATTGTATTCAATCCCACTGCTTTGCTCGGCAATGGTTCTCCTCCGAATTGCTGCCGTCTGGCCTCTGGCCTCAGTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000320892.11
3UTR-3UTR TCA 90 bp AATGGAGACAAATTATGCCGCTTCACAGGAATAAGTCCGTCCACTCAACGCAGATGTGACATAGGTCCCTaGAATCACGGCGTCCAGCCT +
Preference number: 2 (lower is better)
Translates to: NGDKLCRFTGISPSTQRRCDIGP*NHGVQP
Trigger: AGGCTGGACGCCGTGATTTCAGGGACCTATGTCACA...TCTGCGTTGAGTGGACGGACTTATTCCTGTGAAGCGGCATAATTTGTCTCCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320892.11
3UTR-3UTR TCA 90 bp AATGGAGACAAATTATGCCGCTTCACAGGAATAAGTCCGTCCACTCAACGCAGAGGCTACAGATGTGCATaGCTGGGCCAGAGACTCTTC +
Preference number: 2 (lower is better)
Translates to: NGDKLCRFTGISPSTQRRGYRCA*LGQRLF
Trigger: GAAGAGTCTCTGGCCCAGTCATGCACATCTGTAGCC...TCTGCGTTGAGTGGACGGACTTATTCCTGTGAAGCGGCATAATTTGTCTCCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320892.11
3UTR CAA 90 bp CGGCAGCAATTCGGAGGAGAACCATTGCCGAGCAAAGCAGTGGGATaGAATACAATAAAAAGCGTTTTCTGCTACCTGGGAGAGAAGGGA +
Preference number: 2 (lower is better)
Translates to: RQQFGGEPLPSKAVG*NTIKSVFCYLGEKG
Trigger: TCCCTTCTCTCCCAGGTAGCAGAAAACGCTTTTTATTGTATTCAATCCCACTGCTTTGCTCGGCAATGGTTCTCCTCCGAATTGCTGCCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000320892.11
3UTR-3UTR GCA 90 bp GTATGTGTCCTTATTAATCCCTGCATCCTGCTGCCATGGAAATGGTCACAGACACCACAGAGAGAAAGCTaGCTGGTGCACTTCTCACAG +
Preference number: 2 (lower is better)
Translates to: VCVLINPCILLPWKWSQTPQRES*LVHFSQ
Trigger: CTGTGAGAAGTGCACCAGGCAGCTTTCTCTCTGTGG...TGTCTGTGACCATTTCCATGGCAGCAGGATGCAGGGATTAATAAGGACACATAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320892.11
3UTR-3UTR GCA 90 bp AATGGAGACAAATTATGCCGCTTCACAGGAATAAGTCCGTCCACTCAACGCAGACAGTGGCTGGACAGCTaGATCCACATATCACAGGCT +
Preference number: 2 (lower is better)
Translates to: NGDKLCRFTGISPSTQRRQWLDS*IHISQA
Trigger: AGCCTGTGATATGTGGATGCAGCTGTCCAGCCACTG...TCTGCGTTGAGTGGACGGACTTATTCCTGTGAAGCGGCATAATTTGTCTCCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320892.11
3UTR-3UTR CCA 90 bp GGGGATGCAGCCTTTCCAAAGGCTCTGACTCTCATCCTAAGGACGGGGGTGCTAGTTAGCAACAGGACTTaGAACTGTGTAAGATATATG +
Preference number: 2 (lower is better)
Translates to: GDAAFPKALTLILRTGVLVSNRT*NCVRYM
Trigger: CATATATCTTACACAGTTCCAAGTCCTGTTGCTAAC...TAGCACCCCCGTCCTTAGGATGAGAGTCAGAGCCTTTGGAAAGGCTGCATCCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000320892.11
3UTR-3UTR TCA 90 bp TCCAAAGGCTCTGACTCTCATCCTAAGGACGGGGGTGCTACTGTGTGGGCTCATTTATATGCACCTTGTTaGTTTTCACTACTCAGTTGG +
Preference number: 2 (lower is better)
Translates to: SKGSDSHPKDGGATVWAHLYAPC*FSLLSW
Trigger: CCAACTGAGTAGTGAAAATCAACAAGGTGCATATAA...ATGAGCCCACACAGTAGCACCCCCGTCCTTAGGATGAGAGTCAGAGCCTTTGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000320892.11
3UTR-3UTR TCA 90 bp AATGGAGACAAATTATGCCGCTTCACAGGAATAAGTCCGTCCACTCAACGCAGATTCTTACTGTCTATCTaGAGACTGAGGCCAGAGGCC +
Preference number: 2 (lower is better)
Translates to: NGDKLCRFTGISPSTQRRFLLSI*RLRPEA
Trigger: GGCCTCTGGCCTCAGTCTTCAGATAGACAGTAAGAA...TCTGCGTTGAGTGGACGGACTTATTCCTGTGAAGCGGCATAATTTGTCTCCATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320892.11
3UTR-3UTR GCA 90 bp AATGGAGACAAATTATGCCGCTTCACAGGAATAAGTCCGTCCACTCAACGCAGATACTGTGTGGGCTCATaGGATGGGCAGCAGCAATTT +
Preference number: 2 (lower is better)
Translates to: NGDKLCRFTGISPSTQRRYCVGS*DGQQQF
Trigger: AAATTGCTGCTGCCCATCGCATGAGCCCACACAGTA...TCTGCGTTGAGTGGACGGACTTATTCCTGTGAAGCGGCATAATTTGTCTCCATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320892.11
3UTR-3UTR GCA 90 bp AAGGTGCTGACCTCCTATGAGGCTGCAAGCTCATCTGGCTGGGCTATGGACTACAATGGAGACAAATTATaGCGCTTCACAGGAATAAGT +
Preference number: 2 (lower is better)
Translates to: KVLTSYEAASSSGWAMDYNGDKL*RFTGIS
Trigger: ACTTATTCCTGTGAAGCGGCATAATTTGTCTCCATT...GTAGTCCATAGCCCAGCCAGATGAGCTTGCAGCCTCATAGGAGGTCAGCACCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320892.11
3UTR-3UTR GCA 90 bp AATGGAGACAAATTATGCCGCTTCACAGGAATAAGTCCGTCCACTCAACGCAGAGTCCTTATTAATCCCTaGATCCTGCTGCCATGGAAA +
Preference number: 2 (lower is better)
Translates to: NGDKLCRFTGISPSTQRRVLINP*ILLPWK
Trigger: TTTCCATGGCAGCAGGATGCAGGGATTAATAAGGAC...TCTGCGTTGAGTGGACGGACTTATTCCTGTGAAGCGGCATAATTTGTCTCCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320892.11
3UTR-3UTR GCA 90 bp ATGCGAGTTTATGTATCTCAGAGTGATCTTGCTGGTATTTATATAGGAAATGGAGGCCATCCCCAGACATaGCTAGTCTACCACAGAGAG +
Preference number: 2 (lower is better)
Translates to: MRVYVSQSDLAGIYIGNGGHPQT*LVYHRE
Trigger: CTCTCTGTGGTAGACTAGGCATGTCTGGGGATGGCC...TCCATTTCCTATATAAATACCAGCAAGATCACTCTGAGATACATAAACTCGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320892.11
3UTR-3UTR GCA 90 bp CCTGTGTGCTATTTCCATTTTACATCAAGCAGGGTTCATACTGTATTCCCATCATCTCTGACAACATGGTaGCATCTAGAAGCCAAGGAG +
Preference number: 2 (lower is better)
Translates to: PVCYFHFTSSRVHTVFPSSLTTW*HLEAKE
Trigger: CTCCTTGGCTTCTAGATGGCACCATGTTGTCAGAGA...TGATGGGAATACAGTATGAACCCTGCTTGATGTAAAATGGAAATAGCACACAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320892.11
3UTR-3UTR TCA 90 bp CCTGTGTGCTATTTCCATTTTACATCAAGCAGGGTTCATACTGTATTCCCATCAACATCTGCGGATCAATaGGGCTGCTTTCTTCTTACT +
Preference number: 2 (lower is better)
Translates to: PVCYFHFTSSRVHTVFPSTSADQ*GCFLLT
Trigger: AGTAAGAAGAAAGCAGCCTCATTGATCCGCAGATGT...TGATGGGAATACAGTATGAACCCTGCTTGATGTAAAATGGAAATAGCACACAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320892.11
3UTR-3UTR GCA 90 bp ATGCGAGTTTATGTATCTCAGAGTGATCTTGCTGGTATTTATATAGGAAATGGATCGGAGGAGAACCATTaGCGAGCAAAGCAGTGGGAT +
Preference number: 2 (lower is better)
Translates to: MRVYVSQSDLAGIYIGNGSEENH*RAKQWD
Trigger: ATCCCACTGCTTTGCTCGGCAATGGTTCTCCTCCGA...TCCATTTCCTATATAAATACCAGCAAGATCACTCTGAGATACATAAACTCGCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320892.11
3UTR-3UTR CCA 90 bp AATGGAGACAAATTATGCCGCTTCACAGGAATAAGTCCGTCCACTCAACGCAGAAAGAAAGGCATAGGATaGTTTATATGCACCTTGTTG +
Preference number: 2 (lower is better)
Translates to: NGDKLCRFTGISPSTQRRKKGIG*FICTLL
Trigger: CAACAAGGTGCATATAAACCATCCTATGCCTTTCTT...TCTGCGTTGAGTGGACGGACTTATTCCTGTGAAGCGGCATAATTTGTCTCCATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320892.11
3UTR CAA 90 bp ATCCAGAAAGGGAGTCGCAGGCATGTTCTTACTGAGTTACTAAACTaGCAATTACAAGGAGAGCTTTTTGAATGTAATTTTGACACACAG +
Preference number: 2 (lower is better)
Translates to: IQKGSRRHVLTELLN*QLQGELFECNFDTQ
Trigger: CTGTGTGTCAAAATTACATTCAAAAAGCTCTCCTTGTAATTGCAAGTTTAGTAACTCAGTAAGAACATGCCTGCGACTCCCTTTCTGGAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000320892.11
3UTR CCA 72 bp ACTGGCCACCCACCCTGGGCGGCAGTACAGCAGCCATaGTTGTCTAAGGGCCTTCGCCCCTTACTCCCCAGG +
Preference number: 3 (lower is better)
Translates to: TGHPPWAAVQQP*LSKGLRPLLPR
Trigger: CCTGGGGAGTAAGGGGCGAAGGCCCTTAGACAACCATGGCTGCTGTACTGCCGCCCAGGGTGGGTGGCCAGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320892.11
3UTR CCA 72 bp GCAGGAAGGATGAGCATATGGTGGAGGCGTGTCCTGTaGGCCACTGGACACAGGGCCACAGGCCTCCCATGT +
Preference number: 3 (lower is better)
Translates to: AGRMSIWWRRVL*ATGHRATGLPC
Trigger: ACATGGGAGGCCTGTGGCCCTGTGTCCAGTGGCCCACAGGACACGCCTCCACCATATGCTCATCCTTCCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320892.11
3UTR CCA 72 bp GGGCAGCAGCAATTTCAGGCAGGAAGGATGAGCATATaGTGGAGGCGTGTCCTGTGGGCCACTGGACACAGG +
Preference number: 3 (lower is better)
Translates to: GQQQFQAGRMSI*WRRVLWATGHR
Trigger: CCTGTGTCCAGTGGCCCACAGGACACGCCTCCACCATATGCTCATCCTTCCTGCCTGAAATTGCTGCTGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320892.11
3UTR CCA 72 bp GGCACAAGGATGGCTGGGGCTACAGATGTGCATGACTaGGCCAGAGACTCTTCCAACAGAACAGCCTGTCCC +
Preference number: 3 (lower is better)
Translates to: GTRMAGATDVHD*ARDSSNRTACP
Trigger: GGGACAGGCTGTTCTGTTGGAAGAGTCTCTGGCCCAGTCATGCACATCTGTAGCCCCAGCCATCCTTGTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320892.11
3UTR TCA 72 bp ACCTGGGGCCTCAGCGAACATTGTGACATAGGTCCCTaGAATCACGGCGTCCAGCCTGACACTGTGAAGCTC +
Preference number: 3 (lower is better)
Translates to: TWGLSEHCDIGP*NHGVQPDTVKL
Trigger: GAGCTTCACAGTGTCAGGCTGGACGCCGTGATTTCAGGGACCTATGTCACAATGTTCGCTGAGGCCCCAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320892.11
3UTR CCA 72 bp CTCCCATGTGTGCTGGGCATGTTAAAGGGCAGTGGCTaGACAGCTGCATCCACATATCACAGGCTGAGGGCT +
Preference number: 3 (lower is better)
Translates to: LPCVLGMLKGSG*TAASTYHRLRA
Trigger: AGCCCTCAGCCTGTGATATGTGGATGCAGCTGTCCAGCCACTGCCCTTTAACATGCCCAGCACACATGGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320892.11
3UTR CCA 72 bp AGGCCTCCCATGTGTGCTGGGCATGTTAAAGGGCAGTaGCTGGACAGCTGCATCCACATATCACAGGCTGAG +
Preference number: 3 (lower is better)
Translates to: RPPMCAGHVKGQ*LDSCIHISQAE
Trigger: CTCAGCCTGTGATATGTGGATGCAGCTGTCCAGCCACTGCCCTTTAACATGCCCAGCACACATGGGAGGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320892.11
3UTR CCA 72 bp CTAAGGACGGGGGTGCTACTGTGTGGGCTCATGCGATaGGCAGCAGCAATTTCAGGCAGGAAGGATGAGCAT +
Preference number: 3 (lower is better)
Translates to: LRTGVLLCGLMR*AAAISGRKDEH
Trigger: ATGCTCATCCTTCCTGCCTGAAATTGCTGCTGCCCATCGCATGAGCCCACACAGTAGCACCCCCGTCCTTAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000320892.11
3UTR CCA 72 bp TCTGACTCTCATCCTAAGGACGGGGGTGCTACTGTGTaGGCTCATGCGATGGGCAGCAGCAATTTCAGGCAG +
Preference number: 3 (lower is better)
Translates to: SDSHPKDGGATV*AHAMGSSNFRQ
Trigger: CTGCCTGAAATTGCTGCTGCCCATCGCATGAGCCCACACAGTAGCACCCCCGTCCTTAGGATGAGAGTCAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000320892.11
3UTR TCA 72 bp GAAAGGGCAGGCATGGGGCATGTAGCTACCCCTCACTaGAGGCTCCGGAACTGTGGAAGACAGAATTGCACA +
Preference number: 3 (lower is better)
Translates to: ERAGMGHVATPH*RLRNCGRQNCT
Trigger: TGTGCAATTCTGTCTTCCACAGTTCCGGAGCCTTCAGTGAGGGGTAGCTACATGCCCCATGCCTGCCCTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320892.11
3UTR CCA 72 bp CCCCTGGCTGGCCCCAGAATCTCTGTGGTCCCTATCTaGGTTGAACTACGTGCTTGTGAAACACATCAGAGG +
Preference number: 3 (lower is better)
Translates to: PLAGPRISVVPI*VELRACETHQR
Trigger: CCTCTGATGTGTTTCACAAGCACGTAGTTCAACCCAGATAGGGACCACAGAGATTCTGGGGCCAGCCAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320892.11
3UTR-3UTR CAA 90 bp AAGGTGCTGACCTCCTATGAGGCTGCAAGCTCATCTGGCTGGGCTATGGACTACTGTCATCTGCAGAGATaGATCTGTGGGGATGTGCGC +
Preference number: 3 (lower is better)
Translates to: KVLTSYEAASSSGWAMDYCHLQR*ICGDVR
Trigger: GCGCACATCCCCACAGATCAATCTCTGCAGATGACA...GTAGTCCATAGCCCAGCCAGATGAGCTTGCAGCCTCATAGGAGGTCAGCACCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320892.11
3UTR TCA 72 bp GTGGACATCTATGGTGACTGCATCTTTGCAAGGTGCTaGCCTCCTATGAGGCTGCAAGCTCATCTGGCTGGG +
Preference number: 3 (lower is better)
Translates to: VDIYGDCIFARC*PPMRLQAHLAG
Trigger: CCCAGCCAGATGAGCTTGCAGCCTCATAGGAGGTCAGCACCTTGCAAAGATGCAGTCACCATAGATGTCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320892.11
3UTR GCA 72 bp CAAGGAGCAGAAAGTCTCTTAGGCCATCCCCAGACATaGCTAGTCTACCACAGAGAGAAAGCTGCCTGGTGC +
Preference number: 3 (lower is better)
Translates to: QGAESLLGHPQT*LVYHREKAAWC
Trigger: GCACCAGGCAGCTTTCTCTCTGTGGTAGACTAGGCATGTCTGGGGATGGCCTAAGAGACTTTCTGCTCCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320892.11
3UTR CCA 72 bp CAGACATGCCTAGTCTACCACAGAGAGAAAGCTGCCTaGTGCACTTCTCACAGCACCTCCCTGTCATCTGCA +
Preference number: 3 (lower is better)
Translates to: QTCLVYHREKAA*CTSHSTSLSSA
Trigger: TGCAGATGACAGGGAGGTGCTGTGAGAAGTGCACCAGGCAGCTTTCTCTCTGTGGTAGACTAGGCATGTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320892.11
3UTR GCA 72 bp ATACAAAAAGTCAGAGCCAGTAGGTGCCAATTTGACTaGCCCTGGCTGGCCCCAGAATCTCTGTGGTCCCTA +
Preference number: 3 (lower is better)
Translates to: IQKVRASRCQFD*PWLAPESLWSL
Trigger: TAGGGACCACAGAGATTCTGGGGCCAGCCAGGGGCAGTCAAATTGGCACCTACTGGCTCTGACTTTTTGTAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000320892.11
3UTR CCA 72 bp CAATTTGACTGCCCCTGGCTGGCCCCAGAATCTCTGTaGTCCCTATCTGGGTTGAACTACGTGCTTGTGAAA +
Preference number: 3 (lower is better)
Translates to: QFDCPWLAPESL*SLSGLNYVLVK
Trigger: TTTCACAAGCACGTAGTTCAACCCAGATAGGGACCACAGAGATTCTGGGGCCAGCCAGGGGCAGTCAAATTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320892.11
3UTR CCA 72 bp GTCCGTCCACTCAACGCAGAACTCCCCAGGTTTTACTaGGGAATGATGGCAAGATCAAAGTCCAAACCCAGG +
Preference number: 3 (lower is better)
Translates to: VRPLNAELPRFY*GMMARSKSKPR
Trigger: CCTGGGTTTGGACTTTGATCTTGCCATCATTCCCCAGTAAAACCTGGGGAGTTCTGCGTTGAGTGGACGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320892.11
3UTR TCA 72 bp CGGATCAATGAGGCTGCTTTCTTCTTACTGTCTATCTaGAGACTGAGGCCAGAGGCCAGACGGCAGCAATTC +
Preference number: 3 (lower is better)
Translates to: RINEAAFFLLSI*RLRPEARRQQF
Trigger: GAATTGCTGCCGTCTGGCCTCTGGCCTCAGTCTTCAGATAGACAGTAAGAAGAAAGCAGCCTCATTGATCCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320892.11
3UTR TCA 72 bp AGCCTCTGCCAAGAGGCCCCTACATCTGCGGATCAATaGGGCTGCTTTCTTCTTACTGTCTATCTGAAGACT +
Preference number: 3 (lower is better)
Translates to: SLCQEAPTSADQ*GCFLLTVYLKT
Trigger: AGTCTTCAGATAGACAGTAAGAAGAAAGCAGCCTCATTGATCCGCAGATGTAGGGGCCTCTTGGCAGAGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320892.11
3UTR TCA 72 bp ATCCTAAGTCAGTCTCTGCTACGTGGACATCTATGGTaGCTGCATCTTTGCAAGGTGCTGACCTCCTATGAG +
Preference number: 3 (lower is better)
Translates to: ILSQSLLRGHLW*LHLCKVLTSYE
Trigger: CTCATAGGAGGTCAGCACCTTGCAAAGATGCAGTCACCATAGATGTCCACGTAGCAGAGACTGACTTAGGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320892.11
3UTR GCA 72 bp ATGATGGCAAGATCAAAGTCCAAACCCAGGGCCATCTaGCTGTGTGCTATTTCCATTTTACATCAAGCAGGG +
Preference number: 3 (lower is better)
Translates to: MMARSKSKPRAI*LCAISILHQAG
Trigger: CCCTGCTTGATGTAAAATGGAAATAGCACACAGGCAGATGGCCCTGGGTTTGGACTTTGATCTTGCCATCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320892.11
3UTR-3UTR CAA 90 bp TTATGCCGCTTCACAGGAATAAGTCCGTCCACTCAACGCAGAACTCCCCAGGTTACTGAGTTACTAAACTaGCAATTACAAGGAGAGCTT +
Preference number: 3 (lower is better)
Translates to: LCRFTGISPSTQRRTPQVTELLN*QLQGEL
Trigger: AAGCTCTCCTTGTAATTGCAAGTTTAGTAACTCAGT...AACCTGGGGAGTTCTGCGTTGAGTGGACGGACTTATTCCTGTGAAGCGGCATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320892.11
3UTR CCA 72 bp TGCTTTATCTCAGATCCTAAGTCAGTCTCTGCTACGTaGACATCTATGGTGACTGCATCTTTGCAAGGTGCT +
Preference number: 3 (lower is better)
Translates to: CFISDPKSVSAT*TSMVTASLQGA
Trigger: AGCACCTTGCAAAGATGCAGTCACCATAGATGTCCACGTAGCAGAGACTGACTTAGGATCTGAGATAAAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320892.11
3UTR GCA 72 bp CTGGGGCTTGCAGTGAACACCATCTGTAAGAGTGAATaGCATTTTTCAATGGAGACAAATTATGCCGCTTCA +
Preference number: 3 (lower is better)
Translates to: LGLAVNTICKSE*HFSMETNYAAS
Trigger: TGAAGCGGCATAATTTGTCTCCATTGAAAAATGGCATTCACTCTTACAGATGGTGTTCACTGCAAGCCCCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000320892.11
3UTR GCA 72 bp AATAATGTGTATGTGTCCTTATTAATCCCTGCATCCTaGTGCCATGGAAATGGTCACAGACAGCCCTGTAAA +
Preference number: 3 (lower is better)
Translates to: NNVYVSLLIPAS*CHGNGHRQPCK
Trigger: TTTACAGGGCTGTCTGTGACCATTTCCATGGCAGCAGGATGCAGGGATTAATAAGGACACATACACATTATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320892.11
3UTR GCA 72 bp GAAGAACTAATTTGGACAGTTATTCCTGCAATCCGATaGTTTATCTCAGATCCTAAGTCAGTCTCTGCTACG +
Preference number: 3 (lower is better)
Translates to: EELIWTVIPAIR*FISDPKSVSAT
Trigger: CGTAGCAGAGACTGACTTAGGATCTGAGATAAAGCATCGGATTGCAGGAATAACTGTCCAAATTAGTTCTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320892.11
3UTR-3UTR CAA 90 bp CCTGTGTGCTATTTCCATTTTACATCAAGCAGGGTTCATACTGTATTCCCATCATGGTTTATATGCACCTaGTTGATTTTCACTACTCAG +
Preference number: 3 (lower is better)
Translates to: PVCYFHFTSSRVHTVFPSWFICT*LIFTTQ
Trigger: CTGAGTAGTGAAAATCAACAAGGTGCATATAAACCA...TGATGGGAATACAGTATGAACCCTGCTTGATGTAAAATGGAAATAGCACACAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320892.11
3UTR-3UTR CAA 90 bp ATGCGAGTTTATGTATCTCAGAGTGATCTTGCTGGTATTTATATAGGAAATGGAAGCAAAGCAGTGGGATaGAATACAATAAAAAGCGTT +
Preference number: 3 (lower is better)
Translates to: MRVYVSQSDLAGIYIGNGSKAVG*NTIKSV
Trigger: AACGCTTTTTATTGTATTCAATCCCACTGCTTTGCT...TCCATTTCCTATATAAATACCAGCAAGATCACTCTGAGATACATAAACTCGCAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000320892.11
CDS-3UTR GCA 90 bp GGCCAGAGGCCAGACGGCAGCAATTCGGAGGAGAACCATTGCCGAGCAAAGCAGCGGCCCGCACTGCAATaGCAGCCCTGCCGCCTCCCG +
Preference number: 4 (lower is better)
Translates to: GQRPDGSNSEENHCRAKQRPALQ*QPCRLP
Trigger: CGGGAGGCGGCAGGGCTGGCATTGCAGTGCGGGCCG...CTGCTTTGCTCGGCAATGGTTCTCCTCCGAATTGCTGCCGTCTGGCCTCTGGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320892.11
CDS-3UTR GCA 90 bp TCTGCAGAGATTGATCTGTGGGGATGTGCGCTACCCACACCTGCCTCCCCTCCCCCGCACGGCCCGCACTaGAATGCCAGCCCTGCCGCC +
Preference number: 4 (lower is better)
Translates to: SAEIDLWGCALPTPASPPPHGPH*NASPAA
Trigger: GGCGGCAGGGCTGGCATTGCAGTGCGGGCCGTGCGG...GGGAGGGGAGGCAGGTGTGGGTAGCGCACATCCCCACAGATCAATCTCTGCAGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000320892.11
3UTR CAA 72 bp GGCCACCCACCCTGGGCGGCAGTACAGCAGCCATGGTaGTCTAAGGGCCTTCGCCCCTTACTCCCCAGGATT +
Preference number: 4 (lower is better)
Translates to: GHPPWAAVQQPW*SKGLRPLLPRI
Trigger: AATCCTGGGGAGTAAGGGGCGAAGGCCCTTAGACAACCATGGCTGCTGTACTGCCGCCCAGGGTGGGTGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320892.11
CDS-3UTR CCA 90 bp AGCAGCCATGGTTGTCTAAGGGCCTTCGCCCCTTACTCCCCAGGATTAAAGGCCGTCTCCGGGCAGCCCTaGCCAGGGTGCCAGCTGGCT +
Preference number: 4 (lower is better)
Translates to: SSHGCLRAFAPYSPGLKAVSGQP*PGCQLA
Trigger: AGCCAGCTGGCACCCTGGCCAGGGCTGCCCGGAGAC...GGCCTTTAATCCTGGGGAGTAAGGGGCGAAGGCCCTTAGACAACCATGGCTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320892.11
CDS-3UTR TCA 90 bp TTATGCCGCTTCACAGGAATAAGTCCGTCCACTCAACGCAGAACTCCCCAGGTTCGCGGTGCGCGGCTCTaGCGCCTCCGCCCGGTACTG +
Preference number: 4 (lower is better)
Translates to: LCRFTGISPSTQRRTPQVRGARL*RLRPVL
Trigger: CAGTACCGGGCGGAGGCGTCAGAGCCGCGCACCGCG...AACCTGGGGAGTTCTGCGTTGAGTGGACGGACTTATTCCTGTGAAGCGGCATAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320892.11
CDS-3UTR TCA 90 bp TCCAAAGGCTCTGACTCTCATCCTAAGGACGGGGGTGCTACTGTGTGGGCTCATCCCCGGGGAGGAAGGTaGTCGGCATGGTCTCCGGGC +
Preference number: 4 (lower is better)
Translates to: SKGSDSHPKDGGATVWAHPRGGR*SAWSPG
Trigger: GCCCGGAGACCATGCCGATCACCTTCCTCCCCGGGG...ATGAGCCCACACAGTAGCACCCCCGTCCTTAGGATGAGAGTCAGAGCCTTTGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000320892.11
CDS-3UTR GCA 90 bp AGCCCTGGGGATGCAGCCTTTCCAAAGGCTCTGACTCTCATCCTAAGGACGGGGCAGCAGGGTACTGGATaGCTGGGCCTGCTCGTCCGC +
Preference number: 4 (lower is better)
Translates to: SPGDAAFPKALTLILRTGQQGTG*LGLLVR
Trigger: GCGGACGAGCAGGCCCAGGCATCCAGTACCCTGCTG...CCCCGTCCTTAGGATGAGAGTCAGAGCCTTTGGAAAGGCTGCATCCCCAGGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320892.11
CDS-3UTR CCA 90 bp GGCCAGAGGCCAGACGGCAGCAATTCGGAGGAGAACCATTGCCGAGCAAAGCAGACACAGCTTGGCAGGTaGACGCCGGGCACCAAGTCC +
Preference number: 4 (lower is better)
Translates to: GQRPDGSNSEENHCRAKQTQLGR*TPGTKS
Trigger: GGACTTGGTGCCCGGCGTCCACCTGCCAAGCTGTGT...CTGCTTTGCTCGGCAATGGTTCTCCTCCGAATTGCTGCCGTCTGGCCTCTGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320892.11
CDS-3UTR CCA 90 bp AGGGCCACAGGCCTCCCATGTGTGCTGGGCATGTTAAAGGGCAGTGGCTGGACAGGGGGTGCTACTGTGTaGGCTCATGCGATGGGCAGC +
Preference number: 4 (lower is better)
Translates to: RATGLPCVLGMLKGSGWTGGATV*AHAMGS
Trigger: GCTGCCCATCGCATGAGCCCACACAGTAGCACCCCC...TGTCCAGCCACTGCCCTTTAACATGCCCAGCACACATGGGAGGCCTGTGGCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000320892.11
CDS-3UTR GCA 90 bp TTATGCCGCTTCACAGGAATAAGTCCGTCCACTCAACGCAGAACTCCCCAGGTTCCTGCTCGTCCGCGGTaGGCGGCTCTGACGCCTCCG +
Preference number: 4 (lower is better)
Translates to: LCRFTGISPSTQRRTPQVPARPR*AALTPP
Trigger: CGGAGGCGTCAGAGCCGCGCACCGCGGACGAGCAGG...AACCTGGGGAGTTCTGCGTTGAGTGGACGGACTTATTCCTGTGAAGCGGCATAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320892.11
CDS-3UTR CCA 90 bp AGCAGCCATGGTTGTCTAAGGGCCTTCGCCCCTTACTCCCCAGGATTAAAGGCCGGGCCAGGTCCCAGGTaGGCCGGTACCTTGTTGTGG +
Preference number: 4 (lower is better)
Translates to: SSHGCLRAFAPYSPGLKAGPGPR*AGTLLW
Trigger: CCACAACAAGGTACCGGCCCACCTGGGACCTGGCCC...GGCCTTTAATCCTGGGGAGTAAGGGGCGAAGGCCCTTAGACAACCATGGCTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320892.11
CDS-3UTR CCA 90 bp AGCCCTGGGGATGCAGCCTTTCCAAAGGCTCTGACTCTCATCCTAAGGACGGGGTGTCCTGTGGGCCACTaGACACAGGGCCACAGGCCT +
Preference number: 4 (lower is better)
Translates to: SPGDAAFPKALTLILRTGCPVGH*TQGHRP
Trigger: AGGCCTGTGGCCCTGTGTCCAGTGGCCCACAGGACA...CCCCGTCCTTAGGATGAGAGTCAGAGCCTTTGGAAAGGCTGCATCCCCAGGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320892.11
CDS-3UTR CCA 90 bp GGGGATGCAGCCTTTCCAAAGGCTCTGACTCTCATCCTAAGGACGGGGGTGCTATGGAGGCGTGTCCTGTaGGCCACTGGACACAGGGCC +
Preference number: 4 (lower is better)
Translates to: GDAAFPKALTLILRTGVLWRRVL*ATGHRA
Trigger: GGCCCTGTGTCCAGTGGCCCACAGGACACGCCTCCA...TAGCACCCCCGTCCTTAGGATGAGAGTCAGAGCCTTTGGAAAGGCTGCATCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000320892.11
CDS-3UTR TCA 90 bp AGACTGAGGCCAGAGGCCAGACGGCAGCAATTCGGAGGAGAACCATTGCCGAGCACTTGGGGCAGCGCTTaGTGGGCGCGTCATCTTCTT +
Preference number: 4 (lower is better)
Translates to: RLRPEARRQQFGGEPLPSTWGSA*WARHLL
Trigger: AAGAAGATGACGCGCCCATCAAGCGCTGCCCCAAGT...GCTCGGCAATGGTTCTCCTCCGAATTGCTGCCGTCTGGCCTCTGGCCTCAGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320892.11
CDS-3UTR TCA 90 bp GGGGATGCAGCCTTTCCAAAGGCTCTGACTCTCATCCTAAGGACGGGGGTGCTACTCAAGCCCAGCCAATaGCTCCCGCGTGGAGTTGCC +
Preference number: 4 (lower is better)
Translates to: GDAAFPKALTLILRTGVLLKPSQ*LPRGVA
Trigger: GGCAACTCCACGCGGGAGTCATTGGCTGGGCTTGAG...TAGCACCCCCGTCCTTAGGATGAGAGTCAGAGCCTTTGGAAAGGCTGCATCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000320892.11
CDS-3UTR TCA 90 bp AGACTGAGGCCAGAGGCCAGACGGCAGCAATTCGGAGGAGAACCATTGCCGAGCCCACATATCACAGGCTaGGGGCTCAAGCCCAGCCAA +
Preference number: 4 (lower is better)
Translates to: RLRPEARRQQFGGEPLPSPHITG*GLKPSQ
Trigger: TTGGCTGGGCTTGAGCCCTCAGCCTGTGATATGTGG...GCTCGGCAATGGTTCTCCTCCGAATTGCTGCCGTCTGGCCTCTGGCCTCAGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320892.11
CDS-3UTR GCA 90 bp AGGGCCACAGGCCTCCCATGTGTGCTGGGCATGTTAAAGGGCAGTGGCTGGACACCCCAAGACAGAGCTTaGAAGACACCAGCGGGTCGA +
Preference number: 4 (lower is better)
Translates to: RATGLPCVLGMLKGSGWTPQDRA*KTPAGR
Trigger: TCGACCCGCTGGTGTCTTGCAAGCTCTGTCTTGGGG...TGTCCAGCCACTGCCCTTTAACATGCCCAGCACACATGGGAGGCCTGTGGCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320892.11
CDS-3UTR GCA 90 bp AGGGCCACAGGCCTCCCATGTGTGCTGGGCATGTTAAAGGGCAGTGGCTGGACAACTCCCGCGTGGAGTTaGCACCCACCTCCAGAAAAG +
Preference number: 4 (lower is better)
Translates to: RATGLPCVLGMLKGSGWTTPAWS*HPPPEK
Trigger: CTTTTCTGGAGGTGGGTGGCAACTCCACGCGGGAGT...TGTCCAGCCACTGCCCTTTAACATGCCCAGCACACATGGGAGGCCTGTGGCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320892.11
CDS-3UTR CCA 90 bp AGCAGCCATGGTTGTCTAAGGGCCTTCGCCCCTTACTCCCCAGGATTAAAGGCCAGAGCTGGGGGAGGCTaGGGGCATGTCAGAGTCAGC +
Preference number: 4 (lower is better)
Translates to: SSHGCLRAFAPYSPGLKARAGGG*GHVRVS
Trigger: GCTGACTCTGACATGCCCCCAGCCTCCCCCAGCTCT...GGCCTTTAATCCTGGGGAGTAAGGGGCGAAGGCCCTTAGACAACCATGGCTGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000320892.11
CDS-3UTR TCA 90 bp TCTGCAGAGATTGATCTGTGGGGATGTGCGCTACCCACACCTGCCTCCCCTCCCGGCTACAGATGTGCATaGCTGGGCCAGAGACTCTTC +
Preference number: 4 (lower is better)
Translates to: SAEIDLWGCALPTPASPPGYRCA*LGQRLF
Trigger: GAAGAGTCTCTGGCCCAGTCATGCACATCTGTAGCC...GGGAGGGGAGGCAGGTGTGGGTAGCGCACATCCCCACAGATCAATCTCTGCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320892.11
CDS-3UTR GCA 90 bp TCTGCAGAGATTGATCTGTGGGGATGTGCGCTACCCACACCTGCCTCCCCTCCCACACTCAGATGTCTCTaGCCTCAGGTCAGGCACCCA +
Preference number: 4 (lower is better)
Translates to: SAEIDLWGCALPTPASPPTLRCL*PQVRHP
Trigger: TGGGTGCCTGACCTGAGGGCAGAGACATCTGAGTGT...GGGAGGGGAGGCAGGTGTGGGTAGCGCACATCCCCACAGATCAATCTCTGCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320892.11
CDS-3UTR GCA 90 bp AGACTGAGGCCAGAGGCCAGACGGCAGCAATTCGGAGGAGAACCATTGCCGAGCGTCAGAGCCAGTAGGTaGCAATTTGACTGCCCCTGG +
Preference number: 4 (lower is better)
Translates to: RLRPEARRQQFGGEPLPSVRASR*QFDCPW
Trigger: CCAGGGGCAGTCAAATTGGCACCTACTGGCTCTGAC...GCTCGGCAATGGTTCTCCTCCGAATTGCTGCCGTCTGGCCTCTGGCCTCAGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320892.11
CDS-3UTR CCA 90 bp GGGCTCATGCGATGGGCAGCAGCAATTTCAGGCAGGAAGGATGAGCATATGGTGACAGATGCCCGGGAGTaGCCCAGCTTGTTCCGGCAG +
Preference number: 4 (lower is better)
Translates to: GLMRWAAAISGRKDEHMVTDARE*PSLFRQ
Trigger: CTGCCGGAACAAGCTGGGCCACTCCCGGGCATCTGT...CACCATATGCTCATCCTTCCTGCCTGAAATTGCTGCTGCCCATCGCATGAGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320892.11
CDS-3UTR CCA 90 bp GGCCAGAGGCCAGACGGCAGCAATTCGGAGGAGAACCATTGCCGAGCAAAGCAGGGAAGGATGAGCATATaGTGGAGGCGTGTCCTGTGG +
Preference number: 4 (lower is better)
Translates to: GQRPDGSNSEENHCRAKQGRMSI*WRRVLW
Trigger: CCACAGGACACGCCTCCACCATATGCTCATCCTTCC...CTGCTTTGCTCGGCAATGGTTCTCCTCCGAATTGCTGCCGTCTGGCCTCTGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320892.11
CDS-3UTR CCA 90 bp AGGGCCACAGGCCTCCCATGTGTGCTGGGCATGTTAAAGGGCAGTGGCTGGACAGTGAAGGCACAAGGATaGCTGGGGCTACAGATGTGC +
Preference number: 4 (lower is better)
Translates to: RATGLPCVLGMLKGSGWTVKAQG*LGLQMC
Trigger: GCACATCTGTAGCCCCAGCCATCCTTGTGCCTTCAC...TGTCCAGCCACTGCCCTTTAACATGCCCAGCACACATGGGAGGCCTGTGGCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320892.11
CDS-3UTR CCA 90 bp CCATGGTTGTCTAAGGGCCTTCGCCCCTTACTCCCCAGGATTAAAGGCCTCTTAACTGGCCACCCACCCTaGGCGGCAGTACAGCAGCCA +
Preference number: 4 (lower is better)
Translates to: PWLSKGLRPLLPRIKGLLTGHPP*AAVQQP
Trigger: TGGCTGCTGTACTGCCGCCCAGGGTGGGTGGCCAGT...TAAGAGGCCTTTAATCCTGGGGAGTAAGGGGCGAAGGCCCTTAGACAACCATGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320892.11
CDS-3UTR CCA 90 bp CAGAGGCCAGACGGCAGCAATTCGGAGGAGAACCATTGCCGAGCAAAGCAGTGGAAGCCACAGGTCCACTaGGCTAAGGCCAGTCCTCAC +
Preference number: 4 (lower is better)
Translates to: QRPDGSNSEENHCRAKQWKPQVH*AKASPH
Trigger: GTGAGGACTGGCCTTAGCCCAGTGGACCTGTGGCTT...CCACTGCTTTGCTCGGCAATGGTTCTCCTCCGAATTGCTGCCGTCTGGCCTCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320892.11
CDS-3UTR TCA 90 bp GGCCAGAGGCCAGACGGCAGCAATTCGGAGGAGAACCATTGCCGAGCAAAGCAGTCCAGCCTGACACTGTaGAGCTCAATGGGGCACATA +
Preference number: 4 (lower is better)
Translates to: GQRPDGSNSEENHCRAKQSSLTL*SSMGHI
Trigger: TATGTGCCCCATTGAGCTTCACAGTGTCAGGCTGGA...CTGCTTTGCTCGGCAATGGTTCTCCTCCGAATTGCTGCCGTCTGGCCTCTGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320892.11
CDS-3UTR TCA 90 bp AGCCCTGGGGATGCAGCCTTTCCAAAGGCTCTGACTCTCATCCTAAGGACGGGGACAGCAGAGCCAGACTaGGAGGTCAGGCATTTCCAG +
Preference number: 4 (lower is better)
Translates to: SPGDAAFPKALTLILRTGTAEPD*EVRHFQ
Trigger: CTGGAAATGCCTGACCTCTCAGTCTGGCTCTGCTGT...CCCCGTCCTTAGGATGAGAGTCAGAGCCTTTGGAAAGGCTGCATCCCCAGGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320892.11
CDS-3UTR TCA 90 bp AGCAGCCATGGTTGTCTAAGGGCCTTCGCCCCTTACTCCCCAGGATTAAAGGCCGGTGCTGACCTCCTATaGGGCTGCAAGCTCATCTGG +
Preference number: 4 (lower is better)
Translates to: SSHGCLRAFAPYSPGLKAGADLL*GCKLIW
Trigger: CCAGATGAGCTTGCAGCCTCATAGGAGGTCAGCACC...GGCCTTTAATCCTGGGGAGTAAGGGGCGAAGGCCCTTAGACAACCATGGCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320892.11
CDS-3UTR GCA 90 bp GTATGTGTCCTTATTAATCCCTGCATCCTGCTGCCATGGAAATGGTCACAGACACTGGATGCCTGGGCCTaGTCGTCCGCGGTGCGCGGC +
Preference number: 4 (lower is better)
Translates to: VCVLINPCILLPWKWSQTLDAWA*SSAVRG
Trigger: GCCGCGCACCGCGGACGAGCAGGCCCAGGCATCCAG...TGTCTGTGACCATTTCCATGGCAGCAGGATGCAGGGATTAATAAGGACACATAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320892.11
CDS-3UTR GCA 90 bp TCTGCAGAGATTGATCTGTGGGGATGTGCGCTACCCACACCTGCCTCCCCTCCCAGAGGCCCCTACATCTaGGGATCAATGAGGCTGCTT +
Preference number: 4 (lower is better)
Translates to: SAEIDLWGCALPTPASPPRGPYI*GSMRLL
Trigger: AAGCAGCCTCATTGATCCGCAGATGTAGGGGCCTCT...GGGAGGGGAGGCAGGTGTGGGTAGCGCACATCCCCACAGATCAATCTCTGCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000320892.11
CDS-3UTR CCA 90 bp AGACTGAGGCCAGAGGCCAGACGGCAGCAATTCGGAGGAGAACCATTGCCGAGCTGTCATCTGCTCCACTaGGTACTCCCCAAGACAGAG +
Preference number: 4 (lower is better)
Translates to: RLRPEARRQQFGGEPLPSCHLLH*VLPKTE
Trigger: CTCTGTCTTGGGGAGTACCCAGTGGAGCAGATGACA...GCTCGGCAATGGTTCTCCTCCGAATTGCTGCCGTCTGGCCTCTGGCCTCAGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320892.11
CDS-3UTR CCA 90 bp AGACTGAGGCCAGAGGCCAGACGGCAGCAATTCGGAGGAGAACCATTGCCGAGCAGCTGGCTTTGCAGGTaGAGCAGAATTCCATACGGC +
Preference number: 4 (lower is better)
Translates to: RLRPEARRQQFGGEPLPSSWLCR*SRIPYG
Trigger: GCCGTATGGAATTCTGCTCCACCTGCAAAGCCAGCT...GCTCGGCAATGGTTCTCCTCCGAATTGCTGCCGTCTGGCCTCTGGCCTCAGTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320892.11
CDS-3UTR CCA 90 bp AGACTGAGGCCAGAGGCCAGACGGCAGCAATTCGGAGGAGAACCATTGCCGAGCTGCATCCTGCTGCCATaGAAATGGTCACAGACAGCC +
Preference number: 4 (lower is better)
Translates to: RLRPEARRQQFGGEPLPSCILLP*KWSQTA
Trigger: GGCTGTCTGTGACCATTTCCATGGCAGCAGGATGCA...GCTCGGCAATGGTTCTCCTCCGAATTGCTGCCGTCTGGCCTCTGGCCTCAGTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320892.11
CDS-3UTR CCA 90 bp GGCCAGAGGCCAGACGGCAGCAATTCGGAGGAGAACCATTGCCGAGCAAAGCAGGCCCCAGAATCTCTGTaGTCCCTATCTGGGTTGAAC +
Preference number: 4 (lower is better)
Translates to: GQRPDGSNSEENHCRAKQAPESL*SLSGLN
Trigger: GTTCAACCCAGATAGGGACCACAGAGATTCTGGGGC...CTGCTTTGCTCGGCAATGGTTCTCCTCCGAATTGCTGCCGTCTGGCCTCTGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320892.11
CDS-3UTR CCA 90 bp AGCCCTGGGGATGCAGCCTTTCCAAAGGCTCTGACTCTCATCCTAAGGACGGGGGCAGTACAGCAGCCATaGTTGTCTAAGGGCCTTCGC +
Preference number: 4 (lower is better)
Translates to: SPGDAAFPKALTLILRTGAVQQP*LSKGLR
Trigger: GCGAAGGCCCTTAGACAACCATGGCTGCTGTACTGC...CCCCGTCCTTAGGATGAGAGTCAGAGCCTTTGGAAAGGCTGCATCCCCAGGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000320892.11
CDS-3UTR CCA 90 bp CAGAGGCCAGACGGCAGCAATTCGGAGGAGAACCATTGCCGAGCAAAGCAGTGGCATCTGGCTGGGCTATaGACTACACAGCAGAGCCAG +
Preference number: 4 (lower is better)
Translates to: QRPDGSNSEENHCRAKQWHLAGL*TTQQSQ
Trigger: CTGGCTCTGCTGTGTAGTCCATAGCCCAGCCAGATG...CCACTGCTTTGCTCGGCAATGGTTCTCCTCCGAATTGCTGCCGTCTGGCCTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320892.11
CDS-3UTR CCA 90 bp AGCCCTGGGGATGCAGCCTTTCCAAAGGCTCTGACTCTCATCCTAAGGACGGGGGGCTGCAAGCTCATCTaGCTGGGCTATGGACTACAC +
Preference number: 4 (lower is better)
Translates to: SPGDAAFPKALTLILRTGGCKLI*LGYGLH
Trigger: GTGTAGTCCATAGCCCAGCCAGATGAGCTTGCAGCC...CCCCGTCCTTAGGATGAGAGTCAGAGCCTTTGGAAAGGCTGCATCCCCAGGGCT
58% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000320892.11
CDS-3UTR TCA 90 bp AAGGTGCTGACCTCCTATGAGGCTGCAAGCTCATCTGGCTGGGCTATGGACTACTCACGGCGTCCAGCCTaGCACTGTGAAGCTCAATGG +
Preference number: 4 (lower is better)
Translates to: KVLTSYEAASSSGWAMDYSRRPA*HCEAQW
Trigger: CCATTGAGCTTCACAGTGTCAGGCTGGACGCCGTGA...GTAGTCCATAGCCCAGCCAGATGAGCTTGCAGCCTCATAGGAGGTCAGCACCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320892.11
CDS-3UTR TCA 90 bp GGCCAGAGGCCAGACGGCAGCAATTCGGAGGAGAACCATTGCCGAGCAAAGCAGATGAGGCCCATGAGCTaGGCTGAATCACCAAAGAGA +
Preference number: 4 (lower is better)
Translates to: GQRPDGSNSEENHCRAKQMRPMS*AESPKR
Trigger: TCTCTTTGGTGATTCAGCTCAGCTCATGGGCCTCAT...CTGCTTTGCTCGGCAATGGTTCTCCTCCGAATTGCTGCCGTCTGGCCTCTGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320892.11
CDS-3UTR TCA 90 bp AGGGCCACAGGCCTCCCATGTGTGCTGGGCATGTTAAAGGGCAGTGGCTGGACATTCTTACTGTCTATCTaGAGACTGAGGCCAGAGGCC +
Preference number: 4 (lower is better)
Translates to: RATGLPCVLGMLKGSGWTFLLSI*RLRPEA
Trigger: GGCCTCTGGCCTCAGTCTTCAGATAGACAGTAAGAA...TGTCCAGCCACTGCCCTTTAACATGCCCAGCACACATGGGAGGCCTGTGGCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320892.11
CDS-3UTR CCA 90 bp CCATGGTTGTCTAAGGGCCTTCGCCCCTTACTCCCCAGGATTAAAGGCCTCTTAGAGTCAGCAGGGTACTaGATGCCTGGGCCTGCTCGT +
Preference number: 4 (lower is better)
Translates to: PWLSKGLRPLLPRIKGLLESAGY*MPGPAR
Trigger: ACGAGCAGGCCCAGGCATCCAGTACCCTGCTGACTC...TAAGAGGCCTTTAATCCTGGGGAGTAAGGGGCGAAGGCCCTTAGACAACCATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320892.11
CDS-3UTR CCA 90 bp AGCAGCCATGGTTGTCTAAGGGCCTTCGCCCCTTACTCCCCAGGATTAAAGGCCAGGGCAGGCAGCATCTaGGCAGCTAATTGCGGTTTC +
Preference number: 4 (lower is better)
Translates to: SSHGCLRAFAPYSPGLKARAGSI*AANCGF
Trigger: GAAACCGCAATTAGCTGCCCAGATGCTGCCTGCCCT...GGCCTTTAATCCTGGGGAGTAAGGGGCGAAGGCCCTTAGACAACCATGGCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320892.11
CDS-3UTR CCA 90 bp CAGAGGCCAGACGGCAGCAATTCGGAGGAGAACCATTGCCGAGCAAAGCAGTGGAGAGAGAAAGCTGCCTaGTGCACTTCTCACAGCACC +
Preference number: 4 (lower is better)
Translates to: QRPDGSNSEENHCRAKQWREKAA*CTSHST
Trigger: GGTGCTGTGAGAAGTGCACCAGGCAGCTTTCTCTCT...CCACTGCTTTGCTCGGCAATGGTTCTCCTCCGAATTGCTGCCGTCTGGCCTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320892.11
CDS-3UTR CCA 90 bp GGGGATGCAGCCTTTCCAAAGGCTCTGACTCTCATCCTAAGGACGGGGGTGCTAGCGTTTTCTGCTACCTaGGAGAGAAGGGATGAGGCC +
Preference number: 4 (lower is better)
Translates to: GDAAFPKALTLILRTGVLAFSAT*ERRDEA
Trigger: GGCCTCATCCCTTCTCTCCCAGGTAGCAGAAAACGC...TAGCACCCCCGTCCTTAGGATGAGAGTCAGAGCCTTTGGAAAGGCTGCATCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000320892.11
CDS-3UTR CCA 90 bp CAGAGGCCAGACGGCAGCAATTCGGAGGAGAACCATTGCCGAGCAAAGCAGTGGGCAAGCTCATCTGGCTaGGCTATGGACTACACAGCA +
Preference number: 4 (lower is better)
Translates to: QRPDGSNSEENHCRAKQWASSSG*AMDYTA
Trigger: TGCTGTGTAGTCCATAGCCCAGCCAGATGAGCTTGC...CCACTGCTTTGCTCGGCAATGGTTCTCCTCCGAATTGCTGCCGTCTGGCCTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320892.11
CDS-3UTR TCA 90 bp TCTGCAGAGATTGATCTGTGGGGATGTGCGCTACCCACACCTGCCTCCCCTCCCCATCTTCTTCCATTTTaGAAGCAGCACTGGTCTCCC +
Preference number: 4 (lower is better)
Translates to: SAEIDLWGCALPTPASPPHLLPF*KQHWSP
Trigger: GGGAGACCAGTGCTGCTTTCAAAATGGAAGAAGATG...GGGAGGGGAGGCAGGTGTGGGTAGCGCACATCCCCACAGATCAATCTCTGCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000320892.11
CDS-3UTR TCA 90 bp AGACTGAGGCCAGAGGCCAGACGGCAGCAATTCGGAGGAGAACCATTGCCGAGCCCTCAGCGAACATTGTaGCATAGGTCCCTGAAATCA +
Preference number: 4 (lower is better)
Translates to: RLRPEARRQQFGGEPLPSPQRTL*HRSLKS
Trigger: TGATTTCAGGGACCTATGTCACAATGTTCGCTGAGG...GCTCGGCAATGGTTCTCCTCCGAATTGCTGCCGTCTGGCCTCTGGCCTCAGTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320892.11
CDS-3UTR TCA 90 bp CAGAGGCCAGACGGCAGCAATTCGGAGGAGAACCATTGCCGAGCAAAGCAGTGGAGAAATAAGGTCATCTaGGCTCTAGCCCTGGGGATG +
Preference number: 4 (lower is better)
Translates to: QRPDGSNSEENHCRAKQWRNKVI*ALALGM
Trigger: CATCCCCAGGGCTAGAGCTCAGATGACCTTATTTCT...CCACTGCTTTGCTCGGCAATGGTTCTCCTCCGAATTGCTGCCGTCTGGCCTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320892.11
CDS-3UTR TCA 90 bp GGGCTCATGCGATGGGCAGCAGCAATTTCAGGCAGGAAGGATGAGCATATGGTGGGTGGGCAGATCACCTaGGGTCAGGAGTTTGAGAGT +
Preference number: 4 (lower is better)
Translates to: GLMRWAAAISGRKDEHMVGGQIT*GQEFES
Trigger: ACTCTCAAACTCCTGACCTCAGGTGATCTGCCCACC...CACCATATGCTCATCCTTCCTGCCTGAAATTGCTGCTGCCCATCGCATGAGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320892.11
CDS-3UTR GCA 90 bp CAGAGGCCAGACGGCAGCAATTCGGAGGAGAACCATTGCCGAGCAAAGCAGTGGCAGGTCCTGGTGTCCTaGTGTGCTTATACACACTCA +
Preference number: 4 (lower is better)
Translates to: QRPDGSNSEENHCRAKQWQVLVS*CAYTHS
Trigger: TGAGTGTGTATAAGCACAGCAGGACACCAGGACCTG...CCACTGCTTTGCTCGGCAATGGTTCTCCTCCGAATTGCTGCCGTCTGGCCTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320892.11
CDS-3UTR GCA 90 bp GGGCTCATGCGATGGGCAGCAGCAATTTCAGGCAGGAAGGATGAGCATATGGTGGGTGCCAGCTGGCTTTaGAGGTGGAGCAGAATTCCA +
Preference number: 4 (lower is better)
Translates to: GLMRWAAAISGRKDEHMVGASWL*RWSRIP
Trigger: TGGAATTCTGCTCCACCTGCAAAGCCAGCTGGCACC...CACCATATGCTCATCCTTCCTGCCTGAAATTGCTGCTGCCCATCGCATGAGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320892.11
CDS-3UTR GCA 90 bp AGGGCCACAGGCCTCCCATGTGTGCTGGGCATGTTAAAGGGCAGTGGCTGGACACGTCGTCACCTTTACTaGACTTGCACTTGCAGCAAA +
Preference number: 4 (lower is better)
Translates to: RATGLPCVLGMLKGSGWTRRHLY*TCTCSK
Trigger: TTTGCTGCAAGTGCAAGTGCAGTAAAGGTGACGACG...TGTCCAGCCACTGCCCTTTAACATGCCCAGCACACATGGGAGGCCTGTGGCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320892.11
CDS-3UTR GCA 90 bp AGGGCCACAGGCCTCCCATGTGTGCTGGGCATGTTAAAGGGCAGTGGCTGGACATCAGGAACTGGCCTGTaGCCTAAACTGGTTTTATGG +
Preference number: 4 (lower is better)
Translates to: RATGLPCVLGMLKGSGWTSGTGL*PKLVLW
Trigger: CCATAAAACCAGTTTAGGGCACAGGCCAGTTCCTGA...TGTCCAGCCACTGCCCTTTAACATGCCCAGCACACATGGGAGGCCTGTGGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320892.11
CDS-3UTR CCA 90 bp GGGGATGCAGCCTTTCCAAAGGCTCTGACTCTCATCCTAAGGACGGGGGTGCTAACCCATAGGGAGAAATaGGAGAAGGTCTCTGGCACC +
Preference number: 4 (lower is better)
Translates to: GDAAFPKALTLILRTGVLTHREK*EKVSGT
Trigger: GGTGCCAGAGACCTTCTCCCATTTCTCCCTATGGGT...TAGCACCCCCGTCCTTAGGATGAGAGTCAGAGCCTTTGGAAAGGCTGCATCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000320892.11
CDS-3UTR CCA 90 bp GGGGATGCAGCCTTTCCAAAGGCTCTGACTCTCATCCTAAGGACGGGGGTGCTAGCCGGTACCTTGTTGTaGTCATCGCAGAACAGTCTC +
Preference number: 4 (lower is better)
Translates to: GDAAFPKALTLILRTGVLAGTLL*SSQNSL
Trigger: GAGACTGTTCTGCGATGACCACAACAAGGTACCGGC...TAGCACCCCCGTCCTTAGGATGAGAGTCAGAGCCTTTGGAAAGGCTGCATCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000320892.11
CDS-3UTR CCA 90 bp TCTGCAGAGATTGATCTGTGGGGATGTGCGCTACCCACACCTGCCTCCCCTCCCAAGATGCATTGGCACTaGGCTATGGTTGTCATCTGC +
Preference number: 4 (lower is better)
Translates to: SAEIDLWGCALPTPASPPKMHWH*AMVVIC
Trigger: GCAGATGACAACCATAGCCCAGTGCCAATGCATCTT...GGGAGGGGAGGCAGGTGTGGGTAGCGCACATCCCCACAGATCAATCTCTGCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320892.11
CDS-3UTR CCA 90 bp AAGGTGCTGACCTCCTATGAGGCTGCAAGCTCATCTGGCTGGGCTATGGACTACTCGTTCTCCTGTAGGTaGCCCTGTTTAGGGCAGGCA +
Preference number: 4 (lower is better)
Translates to: KVLTSYEAASSSGWAMDYSFSCR*PCLGQA
Trigger: TGCCTGCCCTAAACAGGGCCACCTACAGGAGAACGA...GTAGTCCATAGCCCAGCCAGATGAGCTTGCAGCCTCATAGGAGGTCAGCACCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320892.11
CDS-3UTR CCA 90 bp TTATGCCGCTTCACAGGAATAAGTCCGTCCACTCAACGCAGAACTCCCCAGGTTCCAATGACTCCCGCGTaGAGTTGCCACCCACCTCCA +
Preference number: 4 (lower is better)
Translates to: LCRFTGISPSTQRRTPQVPMTPA*SCHPPP
Trigger: TGGAGGTGGGTGGCAACTCCACGCGGGAGTCATTGG...AACCTGGGGAGTTCTGCGTTGAGTGGACGGACTTATTCCTGTGAAGCGGCATAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320892.11
CDS-3UTR CCA 90 bp TCCAAAGGCTCTGACTCTCATCCTAAGGACGGGGGTGCTACTGTGTGGGCTCATCAATTTGACTGCCCCTaGCTGGCCCCAGAATCTCTG +
Preference number: 4 (lower is better)
Translates to: SKGSDSHPKDGGATVWAHQFDCP*LAPESL
Trigger: CAGAGATTCTGGGGCCAGCCAGGGGCAGTCAAATTG...ATGAGCCCACACAGTAGCACCCCCGTCCTTAGGATGAGAGTCAGAGCCTTTGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000320892.11
CDS-3UTR CCA 90 bp AGACTGAGGCCAGAGGCCAGACGGCAGCAATTCGGAGGAGAACCATTGCCGAGCCTCCCCAGGTTTTACTaGGGAATGATGGCAAGATCA +
Preference number: 4 (lower is better)
Translates to: RLRPEARRQQFGGEPLPSLPRFY*GMMARS
Trigger: TGATCTTGCCATCATTCCCCAGTAAAACCTGGGGAG...GCTCGGCAATGGTTCTCCTCCGAATTGCTGCCGTCTGGCCTCTGGCCTCAGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320892.11
3UTR CAA 72 bp GAGGGCTCAAGCCCAGCCAATGACTCCCGCGTGGAGTaGCCACCCACCTCCAGAAAAGCTATTCTAACAGTA +
Preference number: 4 (lower is better)
Translates to: EGSSPANDSRVE*PPTSRKAILTV
Trigger: TACTGTTAGAATAGCTTTTCTGGAGGTGGGTGGCAACTCCACGCGGGAGTCATTGGCTGGGCTTGAGCCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320892.11
CDS-3UTR TCA 90 bp TCCAAAGGCTCTGACTCTCATCCTAAGGACGGGGGTGCTACTGTGTGGGCTCATGTCATCTGCAGAGATTaGTCTGTGGGGATGTGCGCT +
Preference number: 4 (lower is better)
Translates to: SKGSDSHPKDGGATVWAHVICRD*SVGMCA
Trigger: AGCGCACATCCCCACAGATCAATCTCTGCAGATGAC...ATGAGCCCACACAGTAGCACCCCCGTCCTTAGGATGAGAGTCAGAGCCTTTGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000320892.11
CDS-3UTR TCA 90 bp AGGGCCACAGGCCTCCCATGTGTGCTGGGCATGTTAAAGGGCAGTGGCTGGACAACATCTGCGGATCAATaGGGCTGCTTTCTTCTTACT +
Preference number: 4 (lower is better)
Translates to: RATGLPCVLGMLKGSGWTTSADQ*GCFLLT
Trigger: AGTAAGAAGAAAGCAGCCTCATTGATCCGCAGATGT...TGTCCAGCCACTGCCCTTTAACATGCCCAGCACACATGGGAGGCCTGTGGCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320892.11
CDS-3UTR TCA 90 bp AAGGTGCTGACCTCCTATGAGGCTGCAAGCTCATCTGGCTGGGCTATGGACTACGAAACACATCAGAGGTaGAGGCACAAGGATGGCTGG +
Preference number: 4 (lower is better)
Translates to: KVLTSYEAASSSGWAMDYETHQR*RHKDGW
Trigger: CCAGCCATCCTTGTGCCTTCACCTCTGATGTGTTTC...GTAGTCCATAGCCCAGCCAGATGAGCTTGCAGCCTCATAGGAGGTCAGCACCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320892.11
CDS-3UTR GCA 90 bp AGGGCCACAGGCCTCCCATGTGTGCTGGGCATGTTAAAGGGCAGTGGCTGGACATACTGCACTTGCACTTaGAGCAAAGTACAAAGGGAG +
Preference number: 4 (lower is better)
Translates to: RATGLPCVLGMLKGSGWTYCTCT*SKVQRE
Trigger: CTCCCTTTGTACTTTGCTGCAAGTGCAAGTGCAGTA...TGTCCAGCCACTGCCCTTTAACATGCCCAGCACACATGGGAGGCCTGTGGCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320892.11
CDS-3UTR GCA 90 bp GGGCTCATGCGATGGGCAGCAGCAATTTCAGGCAGGAAGGATGAGCATATGGTGCCACAGAGAGAAAGCTaGCTGGTGCACTTCTCACAG +
Preference number: 4 (lower is better)
Translates to: GLMRWAAAISGRKDEHMVPQRES*LVHFSQ
Trigger: CTGTGAGAAGTGCACCAGGCAGCTTTCTCTCTGTGG...CACCATATGCTCATCCTTCCTGCCTGAAATTGCTGCTGCCCATCGCATGAGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320892.11
CDS-3UTR GCA 90 bp GGGGATGCAGCCTTTCCAAAGGCTCTGACTCTCATCCTAAGGACGGGGGTGCTATACTGTGTGGGCTCATaGGATGGGCAGCAGCAATTT +
Preference number: 4 (lower is better)
Translates to: GDAAFPKALTLILRTGVLYCVGS*DGQQQF
Trigger: AAATTGCTGCTGCCCATCGCATGAGCCCACACAGTA...TAGCACCCCCGTCCTTAGGATGAGAGTCAGAGCCTTTGGAAAGGCTGCATCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000320892.11
CDS-3UTR GCA 90 bp AGGGCCACAGGCCTCCCATGTGTGCTGGGCATGTTAAAGGGCAGTGGCTGGACAAACATCAAGACGGCATaGTCTCCTAGTTGTGAAGCA +
Preference number: 4 (lower is better)
Translates to: RATGLPCVLGMLKGSGWTNIKTA*SPSCEA
Trigger: TGCTTCACAACTAGGAGAGCATGCCGTCTTGATGTT...TGTCCAGCCACTGCCCTTTAACATGCCCAGCACACATGGGAGGCCTGTGGCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320892.11
CDS-3UTR CCA 90 bp TCCAAAGGCTCTGACTCTCATCCTAAGGACGGGGGTGCTACTGTGTGGGCTCATCTTCAGGCCAGGTCCTaGTGTCCTGCTGTGCTTATA +
Preference number: 4 (lower is better)
Translates to: SKGSDSHPKDGGATVWAHLQARS*CPAVLI
Trigger: TATAAGCACAGCAGGACACCAGGACCTGGCCTGAAG...ATGAGCCCACACAGTAGCACCCCCGTCCTTAGGATGAGAGTCAGAGCCTTTGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000320892.11
CDS-3UTR CCA 90 bp TCCAAAGGCTCTGACTCTCATCCTAAGGACGGGGGTGCTACTGTGTGGGCTCATATTAGCTGGGTGAGGTaGTGGGTGCCTGTAATCCCA +
Preference number: 4 (lower is better)
Translates to: SKGSDSHPKDGGATVWAHISWVR*WVPVIP
Trigger: TGGGATTACAGGCACCCACCACCTCACCCAGCTAAT...ATGAGCCCACACAGTAGCACCCCCGTCCTTAGGATGAGAGTCAGAGCCTTTGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000320892.11
CDS-3UTR TCA 90 bp TTATGCCGCTTCACAGGAATAAGTCCGTCCACTCAACGCAGAACTCCCCAGGTTTGTGACATAGGTCCCTaGAATCACGGCGTCCAGCCT +
Preference number: 4 (lower is better)
Translates to: LCRFTGISPSTQRRTPQVCDIGP*NHGVQP
Trigger: AGGCTGGACGCCGTGATTTCAGGGACCTATGTCACA...AACCTGGGGAGTTCTGCGTTGAGTGGACGGACTTATTCCTGTGAAGCGGCATAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320892.11
CDS-3UTR TCA 90 bp GGGCTCATGCGATGGGCAGCAGCAATTTCAGGCAGGAAGGATGAGCATATGGTGCGTGGACATCTATGGTaGCTGCATCTTTGCAAGGTG +
Preference number: 4 (lower is better)
Translates to: GLMRWAAAISGRKDEHMVRGHLW*LHLCKV
Trigger: CACCTTGCAAAGATGCAGTCACCATAGATGTCCACG...CACCATATGCTCATCCTTCCTGCCTGAAATTGCTGCTGCCCATCGCATGAGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320892.11
CDS-3UTR GCA 90 bp CAGAGGCCAGACGGCAGCAATTCGGAGGAGAACCATTGCCGAGCAAAGCAGTGGCAAATCCTGCAAAAATaGCCACAACCTGTGTCCGAT +
Preference number: 4 (lower is better)
Translates to: QRPDGSNSEENHCRAKQWQILQK*PQPVSD
Trigger: ATCGGACACAGGTTGTGGGCATTTTTGCAGGATTTG...CCACTGCTTTGCTCGGCAATGGTTCTCCTCCGAATTGCTGCCGTCTGGCCTCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000320892.11
CDS-3UTR GCA 90 bp AGACTGAGGCCAGAGGCCAGACGGCAGCAATTCGGAGGAGAACCATTGCCGAGCCACCTTTACTGCACTTaGACTTGCAGCAAAGTACAA +
Preference number: 4 (lower is better)
Translates to: RLRPEARRQQFGGEPLPSHLYCT*TCSKVQ
Trigger: TTGTACTTTGCTGCAAGTGCAAGTGCAGTAAAGGTG...GCTCGGCAATGGTTCTCCTCCGAATTGCTGCCGTCTGGCCTCTGGCCTCAGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320892.11
CDS-3UTR GCA 90 bp AGCAGCCATGGTTGTCTAAGGGCCTTCGCCCCTTACTCCCCAGGATTAAAGGCCTCTCTGACAACATGGTaGCATCTAGAAGCCAAGGAG +
Preference number: 4 (lower is better)
Translates to: SSHGCLRAFAPYSPGLKASLTTW*HLEAKE
Trigger: CTCCTTGGCTTCTAGATGGCACCATGTTGTCAGAGA...GGCCTTTAATCCTGGGGAGTAAGGGGCGAAGGCCCTTAGACAACCATGGCTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320892.11
CDS-3UTR GCA 90 bp AGACTGAGGCCAGAGGCCAGACGGCAGCAATTCGGAGGAGAACCATTGCCGAGCATAAAAAGCGTTTTCTaGTACCTGGGAGAGAAGGGA +
Preference number: 4 (lower is better)
Translates to: RLRPEARRQQFGGEPLPSIKSVF*YLGEKG
Trigger: TCCCTTCTCTCCCAGGTAGCAGAAAACGCTTTTTAT...GCTCGGCAATGGTTCTCCTCCGAATTGCTGCCGTCTGGCCTCTGGCCTCAGTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000320892.11
CDS-3UTR CCA 90 bp AGCAGCCATGGTTGTCTAAGGGCCTTCGCCCCTTACTCCCCAGGATTAAAGGCCAAAGTACAAAGGGAGTaGCCAGGAGTAGGAAAGGTG +
Preference number: 4 (lower is better)
Translates to: SSHGCLRAFAPYSPGLKAKVQRE*PGVGKV
Trigger: CACCTTTCCTACTCCTGGCCACTCCCTTTGTACTTT...GGCCTTTAATCCTGGGGAGTAAGGGGCGAAGGCCCTTAGACAACCATGGCTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320892.11
CDS-3UTR CCA 90 bp AAGGTGCTGACCTCCTATGAGGCTGCAAGCTCATCTGGCTGGGCTATGGACTACAGAGGTGGCAGATGTTaGTTCCTCTGTCCACAGCTA +
Preference number: 4 (lower is better)
Translates to: KVLTSYEAASSSGWAMDYRGGRC*FLCPQL
Trigger: TAGCTGTGGACAGAGGAACCAACATCTGCCACCTCT...GTAGTCCATAGCCCAGCCAGATGAGCTTGCAGCCTCATAGGAGGTCAGCACCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320892.11
CDS-3UTR CCA 90 bp AGCAGCCATGGTTGTCTAAGGGCCTTCGCCCCTTACTCCCCAGGATTAAAGGCCCATTGTACTCCAGCTTaGGGGACAAAAGCGAAACTC +
Preference number: 4 (lower is better)
Translates to: SSHGCLRAFAPYSPGLKAHCTPA*GTKAKL
Trigger: GAGTTTCGCTTTTGTCCCCCAAGCTGGAGTACAATG...GGCCTTTAATCCTGGGGAGTAAGGGGCGAAGGCCCTTAGACAACCATGGCTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000320892.11
CDS-3UTR CCA 90 bp CCATGGTTGTCTAAGGGCCTTCGCCCCTTACTCCCCAGGATTAAAGGCCTCTTAGTAATTCCAGCACTTTaGGAAGCCGAGGTGGGCAGA +
Preference number: 4 (lower is better)
Translates to: PWLSKGLRPLLPRIKGLLVIPAL*EAEVGR
Trigger: TCTGCCCACCTCGGCTTCCCAAAGTGCTGGAATTAC...TAAGAGGCCTTTAATCCTGGGGAGTAAGGGGCGAAGGCCCTTAGACAACCATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320892.11
CDS-3UTR TCA 90 bp TTATGCCGCTTCACAGGAATAAGTCCGTCCACTCAACGCAGAACTCCCCAGGTTTCGCAGAACAGTCTCTaGGAAATCCAGAGGGGAGGA +
Preference number: 4 (lower is better)
Translates to: LCRFTGISPSTQRRTPQVSQNSL*EIQRGG
Trigger: TCCTCCCCTCTGGATTTCTCAGAGACTGTTCTGCGA...AACCTGGGGAGTTCTGCGTTGAGTGGACGGACTTATTCCTGTGAAGCGGCATAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320892.11
CDS-3UTR TCA 90 bp CCATGGTTGTCTAAGGGCCTTCGCCCCTTACTCCCCAGGATTAAAGGCCTCTTATTCTGGGGCTTGCAGTaGACACCATCTGTAAGAGTG +
Preference number: 4 (lower is better)
Translates to: PWLSKGLRPLLPRIKGLLFWGLQ*TPSVRV
Trigger: CACTCTTACAGATGGTGTTCACTGCAAGCCCCAGAA...TAAGAGGCCTTTAATCCTGGGGAGTAAGGGGCGAAGGCCCTTAGACAACCATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000320892.11
CDS-3UTR GCA 90 bp CCTGTGTGCTATTTCCATTTTACATCAAGCAGGGTTCATACTGTATTCCCATCAGTACTGGCTGCGGGGTaGCGGGTGCCCGCAGTTTGC +
Preference number: 4 (lower is better)
Translates to: PVCYFHFTSSRVHTVFPSVLAAG*RVPAVC
Trigger: GCAAACTGCGGGCACCCGGCACCCCGCAGCCAGTAC...TGATGGGAATACAGTATGAACCCTGCTTGATGTAAAATGGAAATAGCACACAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320892.11
CDS-3UTR GCA 90 bp AAGGTGCTGACCTCCTATGAGGCTGCAAGCTCATCTGGCTGGGCTATGGACTACCCTGGTGTCCTGCTGTaGTTATACACACTCAGATGT +
Preference number: 4 (lower is better)
Translates to: KVLTSYEAASSSGWAMDYPGVLL*LYTLRC
Trigger: ACATCTGAGTGTGTATAAGCACAGCAGGACACCAGG...GTAGTCCATAGCCCAGCCAGATGAGCTTGCAGCCTCATAGGAGGTCAGCACCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320892.11
CDS-3UTR GCA 90 bp AAGGTGCTGACCTCCTATGAGGCTGCAAGCTCATCTGGCTGGGCTATGGACTACACAGAGTACAGAAGATaGATTGGCACTGGGCTATGG +
Preference number: 4 (lower is better)
Translates to: KVLTSYEAASSSGWAMDYTEYRR*IGTGLW
Trigger: CCATAGCCCAGTGCCAATGCATCTTCTGTACTCTGT...GTAGTCCATAGCCCAGCCAGATGAGCTTGCAGCCTCATAGGAGGTCAGCACCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320892.11
CDS-3UTR GCA 90 bp TTATGCCGCTTCACAGGAATAAGTCCGTCCACTCAACGCAGAACTCCCCAGGTTTCGGAGGAGAACCATTaGCGAGCAAAGCAGTGGGAT +
Preference number: 4 (lower is better)
Translates to: LCRFTGISPSTQRRTPQVSEENH*RAKQWD
Trigger: ATCCCACTGCTTTGCTCGGCAATGGTTCTCCTCCGA...AACCTGGGGAGTTCTGCGTTGAGTGGACGGACTTATTCCTGTGAAGCGGCATAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320892.11
CDS-3UTR GCA 90 bp AAGGTGCTGACCTCCTATGAGGCTGCAAGCTCATCTGGCTGGGCTATGGACTACTTAATCCCTGCATCCTaGTGCCATGGAAATGGTCAC +
Preference number: 4 (lower is better)
Translates to: KVLTSYEAASSSGWAMDYLIPAS*CHGNGH
Trigger: GTGACCATTTCCATGGCAGCAGGATGCAGGGATTAA...GTAGTCCATAGCCCAGCCAGATGAGCTTGCAGCCTCATAGGAGGTCAGCACCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320892.11
CDS-3UTR GCA 90 bp AGGGCCACAGGCCTCCCATGTGTGCTGGGCATGTTAAAGGGCAGTGGCTGGACATTGGACAGTTATTCCTaGAATCCGATGCTTTATCTC +
Preference number: 4 (lower is better)
Translates to: RATGLPCVLGMLKGSGWTLDSYS*NPMLYL
Trigger: GAGATAAAGCATCGGATTGCAGGAATAACTGTCCAA...TGTCCAGCCACTGCCCTTTAACATGCCCAGCACACATGGGAGGCCTGTGGCCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320892.11
CDS-3UTR CCA 90 bp GTATGTGTCCTTATTAATCCCTGCATCCTGCTGCCATGGAAATGGTCACAGACAATGGGAGAAGGTCTCTaGCACCAGGGCTCCCTGCAG +
Preference number: 4 (lower is better)
Translates to: VCVLINPCILLPWKWSQTMGEGL*HQGSLQ
Trigger: CTGCAGGGAGCCCTGGTGCCAGAGACCTTCTCCCAT...TGTCTGTGACCATTTCCATGGCAGCAGGATGCAGGGATTAATAAGGACACATAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320892.11
CDS-3UTR CCA 90 bp CCATGGTTGTCTAAGGGCCTTCGCCCCTTACTCCCCAGGATTAAAGGCCTCTTAATTGGCACTGGGCTATaGTTGTCATCTGCTCCACTG +
Preference number: 4 (lower is better)
Translates to: PWLSKGLRPLLPRIKGLLIGTGL*LSSAPL
Trigger: CAGTGGAGCAGATGACAACCATAGCCCAGTGCCAAT...TAAGAGGCCTTTAATCCTGGGGAGTAAGGGGCGAAGGCCCTTAGACAACCATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320892.11
CDS-3UTR CCA 90 bp AAGGTGCTGACCTCCTATGAGGCTGCAAGCTCATCTGGCTGGGCTATGGACTACGTACAGAAGATGCATTaGCACTGGGCTATGGTTGTC +
Preference number: 4 (lower is better)
Translates to: KVLTSYEAASSSGWAMDYVQKMH*HWAMVV
Trigger: GACAACCATAGCCCAGTGCCAATGCATCTTCTGTAC...GTAGTCCATAGCCCAGCCAGATGAGCTTGCAGCCTCATAGGAGGTCAGCACCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320892.11
CDS-3UTR CCA 90 bp TTATGCCGCTTCACAGGAATAAGTCCGTCCACTCAACGCAGAACTCCCCAGGTTCATGTTAAAGGGCAGTaGCTGGACAGCTGCATCCAC +
Preference number: 4 (lower is better)
Translates to: LCRFTGISPSTQRRTPQVHVKGQ*LDSCIH
Trigger: GTGGATGCAGCTGTCCAGCCACTGCCCTTTAACATG...AACCTGGGGAGTTCTGCGTTGAGTGGACGGACTTATTCCTGTGAAGCGGCATAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320892.11
CDS-3UTR CCA 90 bp TCCAAAGGCTCTGACTCTCATCCTAAGGACGGGGGTGCTACTGTGTGGGCTCATAGAAAATGCCAGAGGTaGCAGATGTTGGTTCCTCTG +
Preference number: 4 (lower is better)
Translates to: SKGSDSHPKDGGATVWAHRKCQR*QMLVPL
Trigger: CAGAGGAACCAACATCTGCCACCTCTGGCATTTTCT...ATGAGCCCACACAGTAGCACCCCCGTCCTTAGGATGAGAGTCAGAGCCTTTGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000320892.11
CDS-3UTR CCA 90 bp AGCAGCCATGGTTGTCTAAGGGCCTTCGCCCCTTACTCCCCAGGATTAAAGGCCAATACAAAAATTAGCTaGGTGAGGTGGTGGGTGCCT +
Preference number: 4 (lower is better)
Translates to: SSHGCLRAFAPYSPGLKANTKIS*VRWWVP
Trigger: AGGCACCCACCACCTCACCCAGCTAATTTTTGTATT...GGCCTTTAATCCTGGGGAGTAAGGGGCGAAGGCCCTTAGACAACCATGGCTGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000320892.11
CDS-3UTR TCA 90 bp TCCAAAGGCTCTGACTCTCATCCTAAGGACGGGGGTGCTACTGTGTGGGCTCATGGTTTTACTGGGGAATaGTGGCAAGATCAAAGTCCA +
Preference number: 4 (lower is better)
Translates to: SKGSDSHPKDGGATVWAHGFTGE*WQDQSP
Trigger: TGGACTTTGATCTTGCCATCATTCCCCAGTAAAACC...ATGAGCCCACACAGTAGCACCCCCGTCCTTAGGATGAGAGTCAGAGCCTTTGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000320892.11
CDS-3UTR TCA 90 bp TTATGCCGCTTCACAGGAATAAGTCCGTCCACTCAACGCAGAACTCCCCAGGTTATCTTTGCAAGGTGCTaGCCTCCTATGAGGCTGCAA +
Preference number: 4 (lower is better)
Translates to: LCRFTGISPSTQRRTPQVIFARC*PPMRLQ
Trigger: TTGCAGCCTCATAGGAGGTCAGCACCTTGCAAAGAT...AACCTGGGGAGTTCTGCGTTGAGTGGACGGACTTATTCCTGTGAAGCGGCATAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320892.11
CDS-3UTR GCA 90 bp TCCAAAGGCTCTGACTCTCATCCTAAGGACGGGGGTGCTACTGTGTGGGCTCATGTCCTTATTAATCCCTaGATCCTGCTGCCATGGAAA +
Preference number: 4 (lower is better)
Translates to: SKGSDSHPKDGGATVWAHVLINP*ILLPWK
Trigger: TTTCCATGGCAGCAGGATGCAGGGATTAATAAGGAC...ATGAGCCCACACAGTAGCACCCCCGTCCTTAGGATGAGAGTCAGAGCCTTTGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000320892.11
CDS-3UTR GCA 90 bp AGCCCTGGGGATGCAGCCTTTCCAAAGGCTCTGACTCTCATCCTAAGGACGGGGATTCCTGCAATCCGATaGTTTATCTCAGATCCTAAG +
Preference number: 4 (lower is better)
Translates to: SPGDAAFPKALTLILRTGIPAIR*FISDPK
Trigger: CTTAGGATCTGAGATAAAGCATCGGATTGCAGGAAT...CCCCGTCCTTAGGATGAGAGTCAGAGCCTTTGGAAAGGCTGCATCCCCAGGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320892.11
CDS-3UTR CCA 90 bp CCTGTGTGCTATTTCCATTTTACATCAAGCAGGGTTCATACTGTATTCCCATCAAGGGTACTGGATGCCTaGGCCTGCTCGTCCGCGGTG +
Preference number: 4 (lower is better)
Translates to: PVCYFHFTSSRVHTVFPSRVLDA*ACSSAV
Trigger: CACCGCGGACGAGCAGGCCCAGGCATCCAGTACCCT...TGATGGGAATACAGTATGAACCCTGCTTGATGTAAAATGGAAATAGCACACAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320892.11
CDS-3UTR CCA 90 bp AATGGAGACAAATTATGCCGCTTCACAGGAATAAGTCCGTCCACTCAACGCAGAAGGATGAGCATATGGTaGAGGCGTGTCCTGTGGGCC +
Preference number: 4 (lower is better)
Translates to: NGDKLCRFTGISPSTQRRRMSIW*RRVLWA
Trigger: GGCCCACAGGACACGCCTCCACCATATGCTCATCCT...TCTGCGTTGAGTGGACGGACTTATTCCTGTGAAGCGGCATAATTTGTCTCCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320892.11
CDS-3UTR CCA 90 bp GTATGTGTCCTTATTAATCCCTGCATCCTGCTGCCATGGAAATGGTCACAGACATTGACTGCCCCTGGCTaGCCCCAGAATCTCTGTGGT +
Preference number: 4 (lower is better)
Translates to: VCVLINPCILLPWKWSQTLTAPG*PQNLCG
Trigger: ACCACAGAGATTCTGGGGCCAGCCAGGGGCAGTCAA...TGTCTGTGACCATTTCCATGGCAGCAGGATGCAGGGATTAATAAGGACACATAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320892.11
3UTR CAA 72 bp TGGCTGGCCCCAGAATCTCTGTGGTCCCTATCTGGGTaGAACTACGTGCTTGTGAAACACATCAGAGGTGAA +
Preference number: 4 (lower is better)
Translates to: WLAPESLWSLSG*NYVLVKHIRGE
Trigger: TTCACCTCTGATGTGTTTCACAAGCACGTAGTTCAACCCAGATAGGGACCACAGAGATTCTGGGGCCAGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320892.11
CDS-3UTR GCA 90 bp GTATGTGTCCTTATTAATCCCTGCATCCTGCTGCCATGGAAATGGTCACAGACAACAACCTGTGTCCGATaGCAGATCACAGATGCCCGG +
Preference number: 4 (lower is better)
Translates to: VCVLINPCILLPWKWSQTTTCVR*QITDAR
Trigger: CCGGGCATCTGTGATCTGGCATCGGACACAGGTTGT...TGTCTGTGACCATTTCCATGGCAGCAGGATGCAGGGATTAATAAGGACACATAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320892.11
CDS-3UTR GCA 90 bp GTATGTGTCCTTATTAATCCCTGCATCCTGCTGCCATGGAAATGGTCACAGACACTGGGGCTACAGATGTaGATGACTGGGCCAGAGACT +
Preference number: 4 (lower is better)
Translates to: VCVLINPCILLPWKWSQTLGLQM*MTGPET
Trigger: AGTCTCTGGCCCAGTCATGCACATCTGTAGCCCCAG...TGTCTGTGACCATTTCCATGGCAGCAGGATGCAGGGATTAATAAGGACACATAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320892.11
CDS-3UTR GCA 90 bp CAGAGGCCAGACGGCAGCAATTCGGAGGAGAACCATTGCCGAGCAAAGCAGTGGAATGGAGACAAATTATaGCGCTTCACAGGAATAAGT +
Preference number: 4 (lower is better)
Translates to: QRPDGSNSEENHCRAKQWNGDKL*RFTGIS
Trigger: ACTTATTCCTGTGAAGCGGCATAATTTGTCTCCATT...CCACTGCTTTGCTCGGCAATGGTTCTCCTCCGAATTGCTGCCGTCTGGCCTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320892.11
CDS-3UTR CCA 90 bp CAGAGGCCAGACGGCAGCAATTCGGAGGAGAACCATTGCCGAGCAAAGCAGTGGAAGAAAGGCATAGGATaGTTTATATGCACCTTGTTG +
Preference number: 4 (lower is better)
Translates to: QRPDGSNSEENHCRAKQWKKGIG*FICTLL
Trigger: CAACAAGGTGCATATAAACCATCCTATGCCTTTCTT...CCACTGCTTTGCTCGGCAATGGTTCTCCTCCGAATTGCTGCCGTCTGGCCTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320892.11
CDS-3UTR CCA 90 bp AATGGAGACAAATTATGCCGCTTCACAGGAATAAGTCCGTCCACTCAACGCAGATGTGGGCTCATGCGATaGGCAGCAGCAATTTCAGGC +
Preference number: 4 (lower is better)
Translates to: NGDKLCRFTGISPSTQRRCGLMR*AAAISG
Trigger: GCCTGAAATTGCTGCTGCCCATCGCATGAGCCCACA...TCTGCGTTGAGTGGACGGACTTATTCCTGTGAAGCGGCATAATTTGTCTCCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320892.11
CDS-3UTR CCA 90 bp TTATGCCGCTTCACAGGAATAAGTCCGTCCACTCAACGCAGAACTCCCCAGGTTTCAGTCTCTGCTACGTaGACATCTATGGTGACTGCA +
Preference number: 4 (lower is better)
Translates to: LCRFTGISPSTQRRTPQVSVSAT*TSMVTA
Trigger: TGCAGTCACCATAGATGTCCACGTAGCAGAGACTGA...AACCTGGGGAGTTCTGCGTTGAGTGGACGGACTTATTCCTGTGAAGCGGCATAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320892.11
3UTR CAA 72 bp CCAGAGGCCAGACGGCAGCAATTCGGAGGAGAACCATaGCCGAGCAAAGCAGTGGGATTGAATACAATAAAA +
Preference number: 4 (lower is better)
Translates to: PEARRQQFGGEP*PSKAVGLNTIK
Trigger: TTTTATTGTATTCAATCCCACTGCTTTGCTCGGCAATGGTTCTCCTCCGAATTGCTGCCGTCTGGCCTCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320892.11
CDS-3UTR GCA 90 bp TTATGCCGCTTCACAGGAATAAGTCCGTCCACTCAACGCAGAACTCCCCAGGTTCTCTTAGTGAACACATaGCATATGCTTCTGGGGCTT +
Preference number: 4 (lower is better)
Translates to: LCRFTGISPSTQRRTPQVLLVNT*HMLLGL
Trigger: AAGCCCCAGAAGCATATGGCATGTGTTCACTAAGAG...AACCTGGGGAGTTCTGCGTTGAGTGGACGGACTTATTCCTGTGAAGCGGCATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320892.11
CDS-3UTR CCA 90 bp CAAGAAAGGCATAGGATGGTTTATATGCACCTTGTTGATTTTCACTACTCAGTTTTGCACTGCACTGGCTaGGGGGTCTGCAGCCCCACG +
Preference number: 4 (lower is better)
Translates to: QERHRMVYMHLVDFHYSVLHCTG*GVCSPT
Trigger: CGTGGGGCTGCAGACCCCCCAGCCAGTGCAGTGCAA...AACTGAGTAGTGAAAATCAACAAGGTGCATATAAACCATCCTATGCCTTTCTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000320892.11
CDS-3UTR GCA 90 bp CCTGTGTGCTATTTCCATTTTACATCAAGCAGGGTTCATACTGTATTCCCATCAATGCCAGATCACAGATaGCCGGGAGTGGCCCAGCTT +
Preference number: 4 (lower is better)
Translates to: PVCYFHFTSSRVHTVFPSMPDHR*PGVAQL
Trigger: AAGCTGGGCCACTCCCGGGCATCTGTGATCTGGCAT...TGATGGGAATACAGTATGAACCCTGCTTGATGTAAAATGGAAATAGCACACAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320892.11
CDS-3UTR GCA 90 bp GTATGTGTCCTTATTAATCCCTGCATCCTGCTGCCATGGAAATGGTCACAGACACAGCAGCCCAAATCCTaGAAAAATGCCCACAACCTG +
Preference number: 4 (lower is better)
Translates to: VCVLINPCILLPWKWSQTQQPKS*KNAHNL
Trigger: CAGGTTGTGGGCATTTTTGCAGGATTTGGGCTGCTG...TGTCTGTGACCATTTCCATGGCAGCAGGATGCAGGGATTAATAAGGACACATAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000320892.11
CDS-3UTR GCA 90 bp GTATGTGTCCTTATTAATCCCTGCATCCTGCTGCCATGGAAATGGTCACAGACAATCCCTGCATCCTGCTaGCATGGAAATGGTCACAGA +
Preference number: 4 (lower is better)
Translates to: VCVLINPCILLPWKWSQTIPASC*HGNGHR
Trigger: TCTGTGACCATTTCCATGGCAGCAGGATGCAGGGAT...TGTCTGTGACCATTTCCATGGCAGCAGGATGCAGGGATTAATAAGGACACATAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320892.11
CDS-3UTR CCA 90 bp GGGCTCATGCGATGGGCAGCAGCAATTTCAGGCAGGAAGGATGAGCATATGGTGGAGGAAGAACTAATTTaGACAGTTATTCCTGCAATC +
Preference number: 4 (lower is better)
Translates to: GLMRWAAAISGRKDEHMVEEELI*TVIPAI
Trigger: GATTGCAGGAATAACTGTCCAAATTAGTTCTTCCTC...CACCATATGCTCATCCTTCCTGCCTGAAATTGCTGCTGCCCATCGCATGAGCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320892.11
CDS-3UTR CCA 90 bp TCCAAAGGCTCTGACTCTCATCCTAAGGACGGGGGTGCTACTGTGTGGGCTCATGCCTGTGCCCTAAACTaGTTTTATGGAATAATATGT +
Preference number: 4 (lower is better)
Translates to: SKGSDSHPKDGGATVWAHACALN*FYGIIC
Trigger: ACATATTATTCCATAAAACCAGTTTAGGGCACAGGC...ATGAGCCCACACAGTAGCACCCCCGTCCTTAGGATGAGAGTCAGAGCCTTTGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000320892.11
CDS-3UTR GCA 90 bp AATGGAGACAAATTATGCCGCTTCACAGGAATAAGTCCGTCCACTCAACGCAGAAAACCCAGGGCCATCTaGCTGTGTGCTATTTCCATT +
Preference number: 4 (lower is better)
Translates to: NGDKLCRFTGISPSTQRRKPRAI*LCAISI
Trigger: AATGGAAATAGCACACAGGCAGATGGCCCTGGGTTT...TCTGCGTTGAGTGGACGGACTTATTCCTGTGAAGCGGCATAATTTGTCTCCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320892.11
CDS-3UTR CCA 90 bp ATAGGAAGCACACTTATAACAGTACACAGCTTACAGCGTTCAAAAAGTTACTACCGCGCTTCCTCTAGGTaGGTAACGGGTCGTCGTCAC +
Preference number: 4 (lower is better)
Translates to: IGSTLITVHSLQRSKSYYRASSR*VTGRRH
Trigger: GTGACGACGACCCGTTACCCACCTAGAGGAAGCGCG...GTAGTAACTTTTTGAACGCTGTAAGCTGTGTACTGTTATAAGTGTGCTTCCTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000320892.11
CDS-3UTR CCA 90 bp AATGGAGACAAATTATGCCGCTTCACAGGAATAAGTCCGTCCACTCAACGCAGATTAAAGGGCAGTGGCTaGACAGCTGCATCCACATAT +
Preference number: 4 (lower is better)
Translates to: NGDKLCRFTGISPSTQRRLKGSG*TAASTY
Trigger: ATATGTGGATGCAGCTGTCCAGCCACTGCCCTTTAA...TCTGCGTTGAGTGGACGGACTTATTCCTGTGAAGCGGCATAATTTGTCTCCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320892.11
CDS-3UTR GCA 90 bp ATGCGAGTTTATGTATCTCAGAGTGATCTTGCTGGTATTTATATAGGAAATGGACCGGGAGGCAGAGCTTaGAGTGAGCCGAGATCCTGT +
Preference number: 4 (lower is better)
Translates to: MRVYVSQSDLAGIYIGNGPGGRA*SEPRSC
Trigger: ACAGGATCTCGGCTCACTGCAAGCTCTGCCTCCCGG...TCCATTTCCTATATAAATACCAGCAAGATCACTCTGAGATACATAAACTCGCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320892.11
CDS-3UTR TCA 90 bp CAAGAAAGGCATAGGATGGTTTATATGCACCTTGTTGATTTTCACTACTCAGTTTTCAGGCAGGAAGGATaGGCATATGGTGGAGGCGTG +
Preference number: 4 (lower is better)
Translates to: QERHRMVYMHLVDFHYSVFRQEG*AYGGGV
Trigger: CACGCCTCCACCATATGCTCATCCTTCCTGCCTGAA...AACTGAGTAGTGAAAATCAACAAGGTGCATATAAACCATCCTATGCCTTTCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320892.11
CDS-3UTR TCA 90 bp ATGCGAGTTTATGTATCTCAGAGTGATCTTGCTGGTATTTATATAGGAAATGGAGTAGCTACCCCTCACTaGAGGCTCCGGAACTGTGGA +
Preference number: 4 (lower is better)
Translates to: MRVYVSQSDLAGIYIGNGVATPH*RLRNCG
Trigger: TCCACAGTTCCGGAGCCTTCAGTGAGGGGTAGCTAC...TCCATTTCCTATATAAATACCAGCAAGATCACTCTGAGATACATAAACTCGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320892.11
CDS-3UTR GCA 90 bp CAAGAAAGGCATAGGATGGTTTATATGCACCTTGTTGATTTTCACTACTCAGTTGGCCATCCCCAGACATaGCTAGTCTACCACAGAGAG +
Preference number: 4 (lower is better)
Translates to: QERHRMVYMHLVDFHYSVGHPQT*LVYHRE
Trigger: CTCTCTGTGGTAGACTAGGCATGTCTGGGGATGGCC...AACTGAGTAGTGAAAATCAACAAGGTGCATATAAACCATCCTATGCCTTTCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320892.11
CDS-3UTR GCA 90 bp ATAGGAAGCACACTTATAACAGTACACAGCTTACAGCGTTCAAAAAGTTACTACGCTATGGTTGTCATCTaGTCCACTGGGTACTCCCCA +
Preference number: 4 (lower is better)
Translates to: IGSTLITVHSLQRSKSYYAMVVI*STGYSP
Trigger: TGGGGAGTACCCAGTGGAGCAGATGACAACCATAGC...GTAGTAACTTTTTGAACGCTGTAAGCTGTGTACTGTTATAAGTGTGCTTCCTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000320892.11
CDS-3UTR GCA 90 bp AATGGAGACAAATTATGCCGCTTCACAGGAATAAGTCCGTCCACTCAACGCAGATTGCATAATTTCAGCTaGAACCATGCACTCAATCTC +
Preference number: 4 (lower is better)
Translates to: NGDKLCRFTGISPSTQRRLHNFS*NHALNL
Trigger: GAGATTGAGTGCATGGTTGCAGCTGAAATTATGCAA...TCTGCGTTGAGTGGACGGACTTATTCCTGTGAAGCGGCATAATTTGTCTCCATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320892.11
CDS-3UTR GCA 90 bp CCTGTGTGCTATTTCCATTTTACATCAAGCAGGGTTCATACTGTATTCCCATCAAGCAGAAGGCGTGCTTaGAGTTCTTGCACATCATCT +
Preference number: 4 (lower is better)
Translates to: PVCYFHFTSSRVHTVFPSSRRRA*SSCTSS
Trigger: AGATGATGTGCAAGAACTGCAAGCACGCCTTCTGCT...TGATGGGAATACAGTATGAACCCTGCTTGATGTAAAATGGAAATAGCACACAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320892.11
CDS-3UTR CCA 90 bp CCTGTGTGCTATTTCCATTTTACATCAAGCAGGGTTCATACTGTATTCCCATCATCTGTGGTCCCTATCTaGGTTGAACTACGTGCTTGT +
Preference number: 4 (lower is better)
Translates to: PVCYFHFTSSRVHTVFPSSVVPI*VELRAC
Trigger: ACAAGCACGTAGTTCAACCCAGATAGGGACCACAGA...TGATGGGAATACAGTATGAACCCTGCTTGATGTAAAATGGAAATAGCACACAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320892.11
CDS-3UTR TCA 90 bp AATGGAGACAAATTATGCCGCTTCACAGGAATAAGTCCGTCCACTCAACGCAGATTATATGCACCTTGTTaGTTTTCACTACTCAGTTGG +
Preference number: 4 (lower is better)
Translates to: NGDKLCRFTGISPSTQRRLYAPC*FSLLSW
Trigger: CCAACTGAGTAGTGAAAATCAACAAGGTGCATATAA...TCTGCGTTGAGTGGACGGACTTATTCCTGTGAAGCGGCATAATTTGTCTCCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320892.11
CDS-3UTR GCA 90 bp CCTGTGTGCTATTTCCATTTTACATCAAGCAGGGTTCATACTGTATTCCCATCATTTCAGCTGCAACCATaGACTCAATCTCGTTCTCCT +
Preference number: 4 (lower is better)
Translates to: PVCYFHFTSSRVHTVFPSFQLQP*TQSRSP
Trigger: AGGAGAACGAGATTGAGTGCATGGTTGCAGCTGAAA...TGATGGGAATACAGTATGAACCCTGCTTGATGTAAAATGGAAATAGCACACAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320892.11
CDS-3UTR GCA 90 bp ATAGGAAGCACACTTATAACAGTACACAGCTTACAGCGTTCAAAAAGTTACTACTACCAGCAGAAGGCGTaGTTGCAGTTCTTGCACATC +
Preference number: 4 (lower is better)
Translates to: IGSTLITVHSLQRSKSYYYQQKA*LQFLHI
Trigger: GATGTGCAAGAACTGCAAGCACGCCTTCTGCTGGTA...GTAGTAACTTTTTGAACGCTGTAAGCTGTGTACTGTTATAAGTGTGCTTCCTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000320892.11
CDS-3UTR TCA 90 bp ATGCGAGTTTATGTATCTCAGAGTGATCTTGCTGGTATTTATATAGGAAATGGACCACAGCTACTCCTATaGGTTGAGGAGGAAGAACTA +
Preference number: 4 (lower is better)
Translates to: MRVYVSQSDLAGIYIGNGPQLLL*VEEEEL
Trigger: TAGTTCTTCCTCCTCAACTCATAGGAGTAGCTGTGG...TCCATTTCCTATATAAATACCAGCAAGATCACTCTGAGATACATAAACTCGCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320892.11
CDS-3UTR CCA 90 bp CAAGAAAGGCATAGGATGGTTTATATGCACCTTGTTGATTTTCACTACTCAGTTCAAAACCTCCAAATGTaGTCAGTTACTCAAGGGCCT +
Preference number: 4 (lower is better)
Translates to: QERHRMVYMHLVDFHYSVQNLQM*SVTQGP
Trigger: AGGCCCTTGAGTAACTGACCACATTTGGAGGTTTTG...AACTGAGTAGTGAAAATCAACAAGGTGCATATAAACCATCCTATGCCTTTCTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320892.11
CDS-3UTR TCA 90 bp CAAGAAAGGCATAGGATGGTTTATATGCACCTTGTTGATTTTCACTACTCAGTTCACGTTAAAACGAAGTaGAATGGGAGGTTCTTTTCC +
Preference number: 4 (lower is better)
Translates to: QERHRMVYMHLVDFHYSVHVKTK*NGRFFS
Trigger: GGAAAAGAACCTCCCATTTCACTTCGTTTTAACGTG...AACTGAGTAGTGAAAATCAACAAGGTGCATATAAACCATCCTATGCCTTTCTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000320892.11
CDS-3UTR CCA 90 bp ATGCGAGTTTATGTATCTCAGAGTGATCTTGCTGGTATTTATATAGGAAATGGAACTTCTCTGACAACATaGTGCCATCTAGAAGCCAAG +
Preference number: 4 (lower is better)
Translates to: MRVYVSQSDLAGIYIGNGTSLTT*CHLEAK
Trigger: CTTGGCTTCTAGATGGCACCATGTTGTCAGAGAAGT...TCCATTTCCTATATAAATACCAGCAAGATCACTCTGAGATACATAAACTCGCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320892.11
CDS-3UTR TCA 90 bp CAAGAAAGGCATAGGATGGTTTATATGCACCTTGTTGATTTTCACTACTCAGTTGTGCTCACTAATAAATaGGAATCTGAGACACACACA +
Preference number: 4 (lower is better)
Translates to: QERHRMVYMHLVDFHYSVVLTNK*ESETHT
Trigger: TGTGTGTGTCTCAGATTCTCATTTATTAGTGAGCAC...AACTGAGTAGTGAAAATCAACAAGGTGCATATAAACCATCCTATGCCTTTCTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320892.11
CDS-3UTR TCA 90 bp ATAGGAAGCACACTTATAACAGTACACAGCTTACAGCGTTCAAAAAGTTACTACACACCCATAGTAAAGTaGGCAAAGAAGGAAAGAAAG +
Preference number: 4 (lower is better)
Translates to: IGSTLITVHSLQRSKSYYTPIVK*AKKERK
Trigger: CTTTCTTTCCTTCTTTGCTCACTTTACTATGGGTGT...GTAGTAACTTTTTGAACGCTGTAAGCTGTGTACTGTTATAAGTGTGCTTCCTAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000320892.11
CDS-3UTR CCA 90 bp ATAGGAAGCACACTTATAACAGTACACAGCTTACAGCGTTCAAAAAGTTACTACCAGGGATTTTCTAAATaGCTTCGGGTTCATAAGGAA +
Preference number: 4 (lower is better)
Translates to: IGSTLITVHSLQRSKSYYQGFSK*LRVHKE
Trigger: TTCCTTATGAACCCGAAGCCATTTAGAAAATCCCTG...GTAGTAACTTTTTGAACGCTGTAAGCTGTGTACTGTTATAAGTGTGCTTCCTAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000320892.11
3UTR CAA 72 bp ACTTGCAATTACAAGGAGAGCTTTTTGAATGTAATTTaGACACACAGGGATTTTCTAAATGGCTTCGGGTTC +
Preference number: 4 (lower is better)
Translates to: TCNYKESFLNVI*THRDFLNGFGF
Trigger: GAACCCGAAGCCATTTAGAAAATCCCTGTGTGTCAAAATTACATTCAAAAAGCTCTCCTTGTAATTGCAAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000320892.11
3UTR CAA 72 bp GGGAGTCGCAGGCATGTTCTTACTGAGTTACTAAACTaGCAATTACAAGGAGAGCTTTTTGAATGTAATTTT +
Preference number: 4 (lower is better)
Translates to: GSRRHVLTELLN*QLQGELFECNF
Trigger: AAAATTACATTCAAAAAGCTCTCCTTGTAATTGCAAGTTTAGTAACTCAGTAAGAACATGCCTGCGACTCCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000320892.11
CDS-3UTR CCA 90 bp ATGCGAGTTTATGTATCTCAGAGTGATCTTGCTGGTATTTATATAGGAAATGGAGTGCTTCTCTCAAGCTaGAATAATCAGATTCTGTCT +
Preference number: 4 (lower is better)
Translates to: MRVYVSQSDLAGIYIGNGVLLSS*NNQILS
Trigger: AGACAGAATCTGATTATTCCAGCTTGAGAGAAGCAC...TCCATTTCCTATATAAATACCAGCAAGATCACTCTGAGATACATAAACTCGCAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320892.11
CDS-3UTR GCA 90 bp ATGCGAGTTTATGTATCTCAGAGTGATCTTGCTGGTATTTATATAGGAAATGGACATAACGTATACATGTaGATGACTCATTCATGCATA +
Preference number: 4 (lower is better)
Translates to: MRVYVSQSDLAGIYIGNGHNVYM*MTHSCI
Trigger: TATGCATGAATGAGTCATGCACATGTATACGTTATG...TCCATTTCCTATATAAATACCAGCAAGATCACTCTGAGATACATAAACTCGCAT
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320892.11
CDS TCA 90 bp CAGGGTACTGGATGCCTGGGCCTGCTCGTCCGCGGTGCGCGGCTCTaGCGCCTCCGCCCGGTACTGGCTGCGGGGTGCCGGGTGCCCGCA +
Preference number: 5 (lower is better)
Translates to: QGTGCLGLLVRGARL*RLRPVLAAGCRVPA
Trigger: TGCGGGCACCCGGCACCCCGCAGCCAGTACCGGGCGGAGGCGTCAGAGCCGCGCACCGCGGACGAGCAGGCCCAGGCATCCAGTACCCTG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320892.11
ENST00000467276.5
CDS TCA 90 bp GGCAGCTTGTGTACAAAGGGTACCTGGTCTCCCCGGGGAGGAAGGTaGTCGGCATGGTCTCCGGGCAGCCCTGGCCAGGGTGCCAGCTGG +
Preference number: 5 (lower is better)
Translates to: GSLCTKGTWSPRGGR*SAWSPGSPGQGASW
Trigger: CCAGCTGGCACCCTGGCCAGGGCTGCCCGGAGACCATGCCGATCACCTTCCTCCCCGGGGAGACCAGGTACCCTTTGTACACAAGCTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467276.5
CDS CCA 90 bp GCACGGAAGGTCAGACCTCCCCACCCCTGGCATCCACCTGCTCCGTaGCAAGGTTCTCCTGGCTGTAGCTGGGACCCAGGGAGGTGGCCA +
Preference number: 5 (lower is better)
Translates to: ARKVRPPHPWHPPAP*QGSPGCSWDPGRWP
Trigger: TGGCCACCTCCCTGGGTCCCAGCTACAGCCAGGAGAACCTTGCCACGGAGCAGGTGGATGCCAGGGGTGGGGAGGTCTGACCTTCCGTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471060.1
CDS CCA 90 bp GGGTCTGCAGCCCCACGTCCTGGAGCTGACACACAGCTTGGCAGGTaGACGCCGGGCACCAAGTCCGACAGGGATCAAACAGCACCTCTC +
Preference number: 5 (lower is better)
Translates to: GSAAPRPGADTQLGR*TPGTKSDRDQTAPL
Trigger: GAGAGGTGCTGTTTGATCCCTGTCGGACTTGGTGCCCGGCGTCCACCTGCCAAGCTGTGTGTCAGCTCCAGGACGTGGGGCTGCAGACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320892.11
ENST00000432850.1
ENST00000467276.5
ENST00000471060.1
ENST00000480970.1
CDS CCA 90 bp TGGTCTCCGGGCAGCCCTGGCCAGGGTGCCAGCTGGCTTTGCAGGTaGAGCAGAATTCCATACGGCAGGCTTTGCACTGCACTGGCTGGG +
Preference number: 5 (lower is better)
Translates to: WSPGSPGQGASWLCR*SRIPYGRLCTALAG
Trigger: CCCAGCCAGTGCAGTGCAAAGCCTGCCGTATGGAATTCTGCTCCACCTGCAAAGCCAGCTGGCACCCTGGCCAGGGCTGCCCGGAGACCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320892.11
ENST00000432850.1
ENST00000467276.5
ENST00000480970.1
CDS GCA 90 bp TCGGCATGGTCTCCGGGCAGCCCTGGCCAGGGTGCCAGCTGGCTTTaGAGGTGGAGCAGAATTCCATACGGCAGGCTTTGCACTGCACTG +
Preference number: 5 (lower is better)
Translates to: SAWSPGSPGQGASWL*RWSRIPYGRLCTAL
Trigger: CAGTGCAGTGCAAAGCCTGCCGTATGGAATTCTGCTCCACCTGCAAAGCCAGCTGGCACCCTGGCCAGGGCTGCCCGGAGACCATGCCGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320892.11
ENST00000432850.1
ENST00000467276.5
ENST00000480970.1
CDS-3UTR CAA 90 bp TCTGCAGAGATTGATCTGTGGGGATGTGCGCTACCCACACCTGCCTCCCCTCCCCGGGAGTGGCCCAGCTaGTTCCGGCAGGGTCCCTTA +
Preference number: 5 (lower is better)
Translates to: SAEIDLWGCALPTPASPPREWPS*FRQGPL
Trigger: TAAGGGACCCTGCCGGAACAAGCTGGGCCACTCCCG...GGGAGGGGAGGCAGGTGTGGGTAGCGCACATCCCCACAGATCAATCTCTGCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000320892.11
CDS GCA 90 bp CTATGGTTGTCATCTGCTCCACTGGGTACTCCCCAAGACAGAGCTTaGAAGACACCAGCGGGTCGAGGGCCAGGTCCCAGGTGGGCCGGT +
Preference number: 5 (lower is better)
Translates to: LWLSSAPLGTPQDRA*KTPAGRGPGPRWAG
Trigger: ACCGGCCCACCTGGGACCTGGCCCTCGACCCGCTGGTGTCTTGCAAGCTCTGTCTTGGGGAGTACCCAGTGGAGCAGATGACAACCATAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320892.11
ENST00000416587.5
ENST00000432850.1
ENST00000433456.1
ENST00000471060.1
CDS CCA 90 bp CAGTCTGAAACGAGAGAAGCACGGAAGGTCAGACCTCCCCACCCCTaGCATCCACCTGCTCCGTGGCAAGGTTCTCCTGGCTGTAGCTGG +
Preference number: 5 (lower is better)
Translates to: QSETREARKVRPPHP*HPPAPWQGSPGCSW
Trigger: CCAGCTACAGCCAGGAGAACCTTGCCACGGAGCAGGTGGATGCCAGGGGTGGGGAGGTCTGACCTTCCGTGCTTCTCTCGTTTCAGACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471060.1
CDS CCA 90 bp CCAGCGGGTCGAGGGCCAGGTCCCAGGTGGGCCGGTACCTTGTTGTaGTCATCGCAGAACAGTCTGAAACGAGAGAAGCACGGAAGGTCA +
Preference number: 5 (lower is better)
Translates to: PAGRGPGPRWAGTLL*SSQNSLKREKHGRS
Trigger: TGACCTTCCGTGCTTCTCTCGTTTCAGACTGTTCTGCGATGACCACAACAAGGTACCGGCCCACCTGGGACCTGGCCCTCGACCCGCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471060.1
CDS-3UTR CAA 90 bp GGCCAGAGGCCAGACGGCAGCAATTCGGAGGAGAACCATTGCCGAGCAAAGCAGGGGTGCCAGCTGGCTTaGCAGGTGGAGCAGAATTCC +
Preference number: 5 (lower is better)
Translates to: GQRPDGSNSEENHCRAKQGCQLA*QVEQNS
Trigger: GGAATTCTGCTCCACCTGCAAAGCCAGCTGGCACCC...CTGCTTTGCTCGGCAATGGTTCTCCTCCGAATTGCTGCCGTCTGGCCTCTGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320892.11
CDS-3UTR CAA 90 bp TCTGCAGAGATTGATCTGTGGGGATGTGCGCTACCCACACCTGCCTCCCCTCCCGACTCCCGCGTGGAGTaGCCACCCACCTCCAGAAAA +
Preference number: 5 (lower is better)
Translates to: SAEIDLWGCALPTPASPPDSRVE*PPTSRK
Trigger: TTTTCTGGAGGTGGGTGGCAACTCCACGCGGGAGTC...GGGAGGGGAGGCAGGTGTGGGTAGCGCACATCCCCACAGATCAATCTCTGCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320892.11
CDS TCA 90 bp GTCCCAGGTGGGCCGGTACCTTGTTGTGGTCATCGCAGAACAGTCTaGAACGAGAGAAGCACGGAAGGTCAGACCTCCCCACCCCTGGCA +
Preference number: 5 (lower is better)
Translates to: VPGGPVPCCGHRRTV*NERSTEGQTSPPLA
Trigger: TGCCAGGGGTGGGGAGGTCTGACCTTCCGTGCTTCTCTCGTTTCAGACTGTTCTGCGATGACCACAACAAGGTACCGGCCCACCTGGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471060.1
CDS-3UTR CAA 90 bp TCTGCAGAGATTGATCTGTGGGGATGTGCGCTACCCACACCTGCCTCCCCTCCCGGCACTGGGCTATGGTaGTCATCTGCTCCACTGGGT +
Preference number: 5 (lower is better)
Translates to: SAEIDLWGCALPTPASPPGTGLW*SSAPLG
Trigger: ACCCAGTGGAGCAGATGACAACCATAGCCCAGTGCC...GGGAGGGGAGGCAGGTGTGGGTAGCGCACATCCCCACAGATCAATCTCTGCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320892.11
CDS CCA 90 bp CTTCCCGGAGGCAGGGATGTGTTCCAGCATCGCGCTTCCTCTAGGTaGGTAACGGGTCGTCGTCACCTTTACTGCACTTGCACTTGCAGC +
Preference number: 5 (lower is better)
Translates to: LPGGRDVFQHRASSR*VTGRRHLYCTCTCS
Trigger: GCTGCAAGTGCAAGTGCAGTAAAGGTGACGACGACCCGTTACCCACCTAGAGGAAGCGCGATGCTGGAACACATCCCTGCCTCCGGGAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320892.11
CDS-3UTR CAA 90 bp GGGGATGCAGCCTTTCCAAAGGCTCTGACTCTCATCCTAAGGACGGGGGTGCTACACTTGGGGCAGCGCTaGATGGGCGCGTCATCTTCT +
Preference number: 5 (lower is better)
Translates to: GDAAFPKALTLILRTGVLHLGQR*MGASSS
Trigger: AGAAGATGACGCGCCCATCAAGCGCTGCCCCAAGTG...TAGCACCCCCGTCCTTAGGATGAGAGTCAGAGCCTTTGGAAAGGCTGCATCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000320892.11
CDS-3UTR CAA 90 bp AGACTGAGGCCAGAGGCCAGACGGCAGCAATTCGGAGGAGAACCATTGCCGAGCTTCGGAGGAGAACCATaGCCGAGCAAAGCAGTGGGA +
Preference number: 5 (lower is better)
Translates to: RLRPEARRQQFGGEPLPSFGGEP*PSKAVG
Trigger: TCCCACTGCTTTGCTCGGCAATGGTTCTCCTCCGAA...GCTCGGCAATGGTTCTCCTCCGAATTGCTGCCGTCTGGCCTCTGGCCTCAGTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320892.11
CDS-3UTR CAA 90 bp CAGAGGCCAGACGGCAGCAATTCGGAGGAGAACCATTGCCGAGCAAAGCAGTGGGCCGAGATCCTGTCATaGTACTCCAGCTTGGGGGAC +
Preference number: 5 (lower is better)
Translates to: QRPDGSNSEENHCRAKQWAEILS*YSSLGD
Trigger: GTCCCCCAAGCTGGAGTACAATGACAGGATCTCGGC...CCACTGCTTTGCTCGGCAATGGTTCTCCTCCGAATTGCTGCCGTCTGGCCTCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000320892.11
CDS GCA 90 bp TCCTGCAAAAATGCCCACAACCTGTGTCCGATGCCAGATCACAGATaGCCGGGAGTGGCCCAGCTTGTTCCGGCAGGGTCCCTTATCGTA +
Preference number: 5 (lower is better)
Translates to: SCKNAHNLCPMPDHR*PGVAQLVPAGSLIV
Trigger: TACGATAAGGGACCCTGCCGGAACAAGCTGGGCCACTCCCGGGCATCTGTGATCTGGCATCGGACACAGGTTGTGGGCATTTTTGCAGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000320892.11
ENST00000467276.5
CDS-3UTR CAA 90 bp GGCCAGAGGCCAGACGGCAGCAATTCGGAGGAGAACCATTGCCGAGCAAAGCAGTGTCATCTGCAGAGATaGATCTGTGGGGATGTGCGC +
Preference number: 5 (lower is better)
Translates to: GQRPDGSNSEENHCRAKQCHLQR*ICGDVR
Trigger: GCGCACATCCCCACAGATCAATCTCTGCAGATGACA...CTGCTTTGCTCGGCAATGGTTCTCCTCCGAATTGCTGCCGTCTGGCCTCTGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320892.11
CDS GCA 90 bp GGGAGGAGAGGAAATGTCTTCAGGCCAGGTCCTGGTGTCCTGCTGTaGTTATACACACTCAGATGTCTCTGCCCTCAGGTCAGGCACCCA +
Preference number: 5 (lower is better)
Translates to: GRRGNVFRPGPGVLL*LYTLRCLCPQVRHP
Trigger: TGGGTGCCTGACCTGAGGGCAGAGACATCTGAGTGTGTATAAGCACAGCAGGACACCAGGACCTGGCCTGAAGACATTTCCTCTCCTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320892.11
ENST00000416587.5
ENST00000467276.5
ENST00000480970.1
CDS-3UTR CAA 90 bp CCATGGTTGTCTAAGGGCCTTCGCCCCTTACTCCCCAGGATTAAAGGCCTCTTATCCCCAAGACAGAGCTaGCAAGACACCAGCGGGTCG +
Preference number: 5 (lower is better)
Translates to: PWLSKGLRPLLPRIKGLLSPRQS*QDTSGS
Trigger: CGACCCGCTGGTGTCTTGCAAGCTCTGTCTTGGGGA...TAAGAGGCCTTTAATCCTGGGGAGTAAGGGGCGAAGGCCCTTAGACAACCATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000320892.11
CDS CCA 90 bp ACAGAAGATGCATTGGCACTGGGCTATGGTTGTCATCTGCTCCACTaGGTACTCCCCAAGACAGAGCTTGCAAGACACCAGCGGGTCGAG +
Preference number: 5 (lower is better)
Translates to: TEDALALGYGCHLLH*VLPKTELARHQRVE
Trigger: CTCGACCCGCTGGTGTCTTGCAAGCTCTGTCTTGGGGAGTACCCAGTGGAGCAGATGACAACCATAGCCCAGTGCCAATGCATCTTCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320892.11
ENST00000416587.5
ENST00000432850.1
ENST00000433456.1
ENST00000471060.1
CDS-3UTR CAA 90 bp GGGCTCATGCGATGGGCAGCAGCAATTTCAGGCAGGAAGGATGAGCATATGGTGTGGGCCGGTACCTTGTaGTGGTCATCGCAGAACAGT +
Preference number: 5 (lower is better)
Translates to: GLMRWAAAISGRKDEHMVWAGTL*WSSQNS
Trigger: ACTGTTCTGCGATGACCACAACAAGGTACCGGCCCA...CACCATATGCTCATCCTTCCTGCCTGAAATTGCTGCTGCCCATCGCATGAGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320892.11
CDS-3UTR CAA 90 bp CCATGGTTGTCTAAGGGCCTTCGCCCCTTACTCCCCAGGATTAAAGGCCTCTTAAGGTGGGCCGGTACCTaGTTGTGGTCATCGCAGAAC +
Preference number: 5 (lower is better)
Translates to: PWLSKGLRPLLPRIKGLLRWAGT*LWSSQN
Trigger: GTTCTGCGATGACCACAACAAGGTACCGGCCCACCT...TAAGAGGCCTTTAATCCTGGGGAGTAAGGGGCGAAGGCCCTTAGACAACCATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320892.11
CDS GCA 90 bp CATCGCGCTTCCTCTAGGTGGGTAACGGGTCGTCGTCACCTTTACTaGACTTGCACTTGCAGCAAAGTACAAAGGGAGTGGCCAGGAGTA +
Preference number: 5 (lower is better)
Translates to: HRASSRWVTGRRHLY*TCTCSKVQREWPGV
Trigger: TACTCCTGGCCACTCCCTTTGTACTTTGCTGCAAGTGCAAGTGCAGTAAAGGTGACGACGACCCGTTACCCACCTAGAGGAAGCGCGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320892.11
CDS CCA 90 bp CGTCACCTTTACTGCACTTGCACTTGCAGCAAAGTACAAAGGGAGTaGCCAGGAGTAGGAAAGGTGAGGCCACCAAGAGCAGCAGCCCAA +
Preference number: 5 (lower is better)
Translates to: RHLYCTCTCSKVQRE*PGVGKVRPPRAAAQ
Trigger: TTGGGCTGCTGCTCTTGGTGGCCTCACCTTTCCTACTCCTGGCCACTCCCTTTGTACTTTGCTGCAAGTGCAAGTGCAGTAAAGGTGACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320892.11
CDS-3UTR CAA 90 bp CAGAGGCCAGACGGCAGCAATTCGGAGGAGAACCATTGCCGAGCAAAGCAGTGGTCATTGTACTCCAGCTaGGGGGACAAAAGCGAAACT +
Preference number: 5 (lower is better)
Translates to: QRPDGSNSEENHCRAKQWSLYSS*GDKSET
Trigger: AGTTTCGCTTTTGTCCCCCAAGCTGGAGTACAATGA...CCACTGCTTTGCTCGGCAATGGTTCTCCTCCGAATTGCTGCCGTCTGGCCTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000320892.11
CDS TCA 90 bp AGACAGGGTCCAGGCTCAGACTGCAGAACCAGCCTACTTGTTTCCTaGGCATTCAGCTTGGTTCTGAGTCCAACCTCGAGGGACTTGAAC +
Preference number: 5 (lower is better)
Translates to: RQGPGSDCRTSLLVS*AFSLVLSPTSRDLN
Trigger: GTTCAAGTCCCTCGAGGTTGGACTCAGAACCAAGCTGAATGCTCAGGAAACAAGTAGGCTGGTTCTGCAGTCTGAGCCTGGACCCTGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433456.1
CDS GCA 90 bp CACAGAGTACAGAAGATGCATTGGCACTGGGCTATGGTTGTCATCTaGTCCACTGGGTACTCCCCAAGACAGAGCTTGCAAGACACCAGC +
Preference number: 5 (lower is better)
Translates to: HRVQKMHWHWAMVVI*STGYSPRQSLQDTS
Trigger: GCTGGTGTCTTGCAAGCTCTGTCTTGGGGAGTACCCAGTGGAGCAGATGACAACCATAGCCCAGTGCCAATGCATCTTCTGTACTCTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320892.11
ENST00000416587.5
ENST00000432850.1
ENST00000433456.1
ENST00000471060.1
CDS GCA 90 bp TCTAGGTGGGTAACGGGTCGTCGTCACCTTTACTGCACTTGCACTTaGAGCAAAGTACAAAGGGAGTGGCCAGGAGTAGGAAAGGTGAGG +
Preference number: 5 (lower is better)
Translates to: SRWVTGRRHLYCTCT*SKVQREWPGVGKVR
Trigger: CCTCACCTTTCCTACTCCTGGCCACTCCCTTTGTACTTTGCTGCAAGTGCAAGTGCAGTAAAGGTGACGACGACCCGTTACCCACCTAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320892.11
CDS GCA 90 bp GCTTCCTCTAGGTGGGTAACGGGTCGTCGTCACCTTTACTGCACTTaGACTTGCAGCAAAGTACAAAGGGAGTGGCCAGGAGTAGGAAAG +
Preference number: 5 (lower is better)
Translates to: ASSRWVTGRRHLYCT*TCSKVQREWPGVGK
Trigger: CTTTCCTACTCCTGGCCACTCCCTTTGTACTTTGCTGCAAGTGCAAGTGCAGTAAAGGTGACGACGACCCGTTACCCACCTAGAGGAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320892.11
CDS-3UTR CAA 90 bp TTATGCCGCTTCACAGGAATAAGTCCGTCCACTCAACGCAGAACTCCCCAGGTTTGTAATTCCAGCACTTaGGGAAGCCGAGGTGGGCAG +
Preference number: 5 (lower is better)
Translates to: LCRFTGISPSTQRRTPQVCNSST*GSRGGQ
Trigger: CTGCCCACCTCGGCTTCCCAAAGTGCTGGAATTACA...AACCTGGGGAGTTCTGCGTTGAGTGGACGGACTTATTCCTGTGAAGCGGCATAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320892.11
CDS CCA 90 bp ACTGTTTCAGGCACAGAGTACAGAAGATGCATTGGCACTGGGCTATaGTTGTCATCTGCTCCACTGGGTACTCCCCAAGACAGAGCTTGC +
Preference number: 5 (lower is better)
Translates to: TVSGTEYRRCIGTGL*LSSAPLGTPQDRAC
Trigger: GCAAGCTCTGTCTTGGGGAGTACCCAGTGGAGCAGATGACAACCATAGCCCAGTGCCAATGCATCTTCTGTACTCTGTGCCTGAAACAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320892.11
ENST00000416587.5
ENST00000432850.1
ENST00000433456.1
ENST00000471060.1
CDS-3UTR CAA 90 bp AGCAGCCATGGTTGTCTAAGGGCCTTCGCCCCTTACTCCCCAGGATTAAAGGCCTTACTGCACTTGCACTaGCAGCAAAGTACAAAGGGA +
Preference number: 5 (lower is better)
Translates to: SSHGCLRAFAPYSPGLKALLHLH*QQSTKG
Trigger: TCCCTTTGTACTTTGCTGCAAGTGCAAGTGCAGTAA...GGCCTTTAATCCTGGGGAGTAAGGGGCGAAGGCCCTTAGACAACCATGGCTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320892.11
CDS-3UTR CAA 90 bp TCTGCAGAGATTGATCTGTGGGGATGTGCGCTACCCACACCTGCCTCCCCTCCCGGAGGAAGAACTAATTaGGACAGTTATTCCTGCAAT +
Preference number: 5 (lower is better)
Translates to: SAEIDLWGCALPTPASPPGGRTN*DSYSCN
Trigger: ATTGCAGGAATAACTGTCCAAATTAGTTCTTCCTCC...GGGAGGGGAGGCAGGTGTGGGTAGCGCACATCCCCACAGATCAATCTCTGCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320892.11
CDS-3UTR CAA 90 bp AGACTGAGGCCAGAGGCCAGACGGCAGCAATTCGGAGGAGAACCATTGCCGAGCGTTTCTAATCCTTCTTaGATCAAGAGCTCAACATAC +
Preference number: 5 (lower is better)
Translates to: RLRPEARRQQFGGEPLPSVSNPS*IKSSTY
Trigger: GTATGTTGAGCTCTTGATCAAAGAAGGATTAGAAAC...GCTCGGCAATGGTTCTCCTCCGAATTGCTGCCGTCTGGCCTCTGGCCTCAGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320892.11
CDS-3UTR CAA 90 bp CCTGTGTGCTATTTCCATTTTACATCAAGCAGGGTTCATACTGTATTCCCATCAGAGCTGACACACAGCTaGGCAGGTGGACGCCGGGCA +
Preference number: 5 (lower is better)
Translates to: PVCYFHFTSSRVHTVFPSELTHS*AGGRRA
Trigger: TGCCCGGCGTCCACCTGCCAAGCTGTGTGTCAGCTC...TGATGGGAATACAGTATGAACCCTGCTTGATGTAAAATGGAAATAGCACACAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320892.11
CDS CCA 90 bp TCAACATACTGTTTCAGGCACAGAGTACAGAAGATGCATTGGCACTaGGCTATGGTTGTCATCTGCTCCACTGGGTACTCCCCAAGACAG +
Preference number: 5 (lower is better)
Translates to: STYCFRHRVQKMHWH*AMVVICSTGYSPRQ
Trigger: CTGTCTTGGGGAGTACCCAGTGGAGCAGATGACAACCATAGCCCAGTGCCAATGCATCTTCTGTACTCTGTGCCTGAAACAGTATGTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320892.11
ENST00000416587.5
ENST00000432850.1
ENST00000433456.1
ENST00000471060.1
CDS-3UTR CAA 90 bp CCATGGTTGTCTAAGGGCCTTCGCCCCTTACTCCCCAGGATTAAAGGCCTCTTAGCCCCTTTGTTCCTTTaGGTGTTTTTGGTAATACCT +
Preference number: 5 (lower is better)
Translates to: PWLSKGLRPLLPRIKGLLAPLFL*VFLVIP
Trigger: AGGTATTACCAAAAACACCAAAAGGAACAAAGGGGC...TAAGAGGCCTTTAATCCTGGGGAGTAAGGGGCGAAGGCCCTTAGACAACCATGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000320892.11
CDS-3UTR CAA 90 bp CAAGAAAGGCATAGGATGGTTTATATGCACCTTGTTGATTTTCACTACTCAGTTTCCATACGGCAGGCTTaGCACTGCACTGGCTGGGGG +
Preference number: 5 (lower is better)
Translates to: QERHRMVYMHLVDFHYSVSIRQA*HCTGWG
Trigger: CCCCCAGCCAGTGCAGTGCAAAGCCTGCCGTATGGA...AACTGAGTAGTGAAAATCAACAAGGTGCATATAAACCATCCTATGCCTTTCTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320892.11
CDS-3UTR CAA 90 bp AAGGTGCTGACCTCCTATGAGGCTGCAAGCTCATCTGGCTGGGCTATGGACTACAGCAAAGCAGTGGGATaGAATACAATAAAAAGCGTT +
Preference number: 5 (lower is better)
Translates to: KVLTSYEAASSSGWAMDYSKAVG*NTIKSV
Trigger: AACGCTTTTTATTGTATTCAATCCCACTGCTTTGCT...GTAGTCCATAGCCCAGCCAGATGAGCTTGCAGCCTCATAGGAGGTCAGCACCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000320892.11
CDS-3UTR CAA 90 bp GGGCTCATGCGATGGGCAGCAGCAATTTCAGGCAGGAAGGATGAGCATATGGTGACTGAGTTACTAAACTaGCAATTACAAGGAGAGCTT +
Preference number: 5 (lower is better)
Translates to: GLMRWAAAISGRKDEHMVTELLN*QLQGEL
Trigger: AAGCTCTCCTTGTAATTGCAAGTTTAGTAACTCAGT...CACCATATGCTCATCCTTCCTGCCTGAAATTGCTGCTGCCCATCGCATGAGCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320892.11
CDS-3UTR CAA 90 bp ATAGGAAGCACACTTATAACAGTACACAGCTTACAGCGTTCAAAAAGTTACTACCCAGTAGGTGCCAATTaGACTGCCCCTGGCTGGCCC +
Preference number: 5 (lower is better)
Translates to: IGSTLITVHSLQRSKSYYPVGAN*TAPGWP
Trigger: GGGCCAGCCAGGGGCAGTCAAATTGGCACCTACTGG...GTAGTAACTTTTTGAACGCTGTAAGCTGTGTACTGTTATAAGTGTGCTTCCTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000320892.11
CDS-3UTR CAA 90 bp GTATGTGTCCTTATTAATCCCTGCATCCTGCTGCCATGGAAATGGTCACAGACAATGGTGACTGCATCTTaGCAAGGTGCTGACCTCCTA +
Preference number: 5 (lower is better)
Translates to: VCVLINPCILLPWKWSQTMVTAS*QGADLL
Trigger: TAGGAGGTCAGCACCTTGCAAAGATGCAGTCACCAT...TGTCTGTGACCATTTCCATGGCAGCAGGATGCAGGGATTAATAAGGACACATAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320892.11
CDS-3UTR CAA 90 bp CCTGTGTGCTATTTCCATTTTACATCAAGCAGGGTTCATACTGTATTCCCATCACAGAGGTGGCAGATGTaGGTTCCTCTGTCCACAGCT +
Preference number: 5 (lower is better)
Translates to: PVCYFHFTSSRVHTVFPSQRWQM*VPLSTA
Trigger: AGCTGTGGACAGAGGAACCAACATCTGCCACCTCTG...TGATGGGAATACAGTATGAACCCTGCTTGATGTAAAATGGAAATAGCACACAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320892.11
CDS-3UTR CAA 90 bp CAAGAAAGGCATAGGATGGTTTATATGCACCTTGTTGATTTTCACTACTCAGTTAGTACAGAAGATGCATaGGCACTGGGCTATGGTTGT +
Preference number: 5 (lower is better)
Translates to: QERHRMVYMHLVDFHYSVSTEDA*ALGYGC
Trigger: ACAACCATAGCCCAGTGCCAATGCATCTTCTGTACT...AACTGAGTAGTGAAAATCAACAAGGTGCATATAAACCATCCTATGCCTTTCTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320892.11
CDS-3UTR CAA 90 bp ATAGGAAGCACACTTATAACAGTACACAGCTTACAGCGTTCAAAAAGTTACTACTGGTCCCTATCTGGGTaGAACTACGTGCTTGTGAAA +
Preference number: 5 (lower is better)
Translates to: IGSTLITVHSLQRSKSYYWSLSG*NYVLVK
Trigger: TTTCACAAGCACGTAGTTCAACCCAGATAGGGACCA...GTAGTAACTTTTTGAACGCTGTAAGCTGTGTACTGTTATAAGTGTGCTTCCTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000320892.11
CDS-3UTR CAA 90 bp ATGCGAGTTTATGTATCTCAGAGTGATCTTGCTGGTATTTATATAGGAAATGGATCACCTTTACTGCACTaGCACTTGCAGCAAAGTACA +
Preference number: 5 (lower is better)
Translates to: MRVYVSQSDLAGIYIGNGSPLLH*HLQQST
Trigger: TGTACTTTGCTGCAAGTGCAAGTGCAGTAAAGGTGA...TCCATTTCCTATATAAATACCAGCAAGATCACTCTGAGATACATAAACTCGCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320892.11
CDS-3UTR CAA 90 bp ATGCGAGTTTATGTATCTCAGAGTGATCTTGCTGGTATTTATATAGGAAATGGATGGTTTATATGCACCTaGTTGATTTTCACTACTCAG +
Preference number: 5 (lower is better)
Translates to: MRVYVSQSDLAGIYIGNGWFICT*LIFTTQ
Trigger: CTGAGTAGTGAAAATCAACAAGGTGCATATAAACCA...TCCATTTCCTATATAAATACCAGCAAGATCACTCTGAGATACATAAACTCGCAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320892.11
CDS GCA 72 bp GCCCGCACTGCAATGCCAGCCCTGCCGCCTCCCGCCTaGCGAGAGCCCGCGCGGGGAGAAGCGGCTGCGCGG +
Preference number: 6 (lower is better)
Translates to: ARTAMPALPPPA*REPARGEAAAR
Trigger: CCGCGCAGCCGCTTCTCCCCGCGCGGGCTCTCGGCAGGCGGGAGGCGGCAGGGCTGGCATTGCAGTGCGGGC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320892.11
CDS GCA 72 bp CGGTGCGCGGCTCTGACGCCTCCGCCCGGTACTGGCTaGGGGGTGCCGGGTGCCCGCAGTTTGCCGCCCGCG +
Preference number: 6 (lower is better)
Translates to: RCAALTPPPGTG*GVPGARSLPPA
Trigger: CGCGGGCGGCAAACTGCGGGCACCCGGCACCCCGCAGCCAGTACCGGGCGGAGGCGTCAGAGCCGCGCACCG
79% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000320892.11
ENST00000467276.5
CDS CCA 72 bp TCCGCGGTGCGCGGCTCTGACGCCTCCGCCCGGTACTaGCTGCGGGGTGCCGGGTGCCCGCAGTTTGCCGCC +
Preference number: 6 (lower is better)
Translates to: SAVRGSDASARY*LRGAGCPQFAA
Trigger: GGCGGCAAACTGCGGGCACCCGGCACCCCGCAGCCAGTACCGGGCGGAGGCGTCAGAGCCGCGCACCGCGGA
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320892.11
ENST00000467276.5
CDS GCA 72 bp GCAGGGTACTGGATGCCTGGGCCTGCTCGTCCGCGGTaGGCGGCTCTGACGCCTCCGCCCGGTACTGGCTGC +
Preference number: 6 (lower is better)
Translates to: AGYWMPGPARPR*AALTPPPGTGC
Trigger: GCAGCCAGTACCGGGCGGAGGCGTCAGAGCCGCGCACCGCGGACGAGCAGGCCCAGGCATCCAGTACCCTGC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320892.11
ENST00000467276.5
CDS CAA 72 bp GGTCTGCAGCCCCACGTCCTGGAGCTGACACACAGCTaGGCAGGTGGACGCCGGGCACCAAGTCCGACAGGG +
Preference number: 6 (lower is better)
Translates to: GLQPHVLELTHS*AGGRRAPSPTG
Trigger: CCCTGTCGGACTTGGTGCCCGGCGTCCACCTGCCAAGCTGTGTGTCAGCTCCAGGACGTGGGGCTGCAGACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320892.11
ENST00000432850.1
ENST00000467276.5
ENST00000471060.1
ENST00000480970.1
CDS CCA 72 bp GTCAGACCTCCCCACCCCTGGCATCCACCTGCTCCGTaGCAAGGTTCTCCTGGCTGTAGCTGGGACCCAGGG +
Preference number: 6 (lower is better)
Translates to: VRPPHPWHPPAP*QGSPGCSWDPG
Trigger: CCCTGGGTCCCAGCTACAGCCAGGAGAACCTTGCCACGGAGCAGGTGGATGCCAGGGGTGGGGAGGTCTGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471060.1
CDS TCA 72 bp TGTACAAAGGGTACCTGGTCTCCCCGGGGAGGAAGGTaGTCGGCATGGTCTCCGGGCAGCCCTGGCCAGGGT +
Preference number: 6 (lower is better)
Translates to: CTKGTWSPRGGR*SAWSPGSPGQG
Trigger: ACCCTGGCCAGGGCTGCCCGGAGACCATGCCGATCACCTTCCTCCCCGGGGAGACCAGGTACCCTTTGTACA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467276.5
CDS GCA 72 bp GATGGCATCACCCTGTGTCCGATGCCAGATCACAGATaGCCGGGAGTGGCCCAGCTTGTTCCGGCAGGGTCC +
Preference number: 6 (lower is better)
Translates to: DGITLCPMPDHR*PGVAQLVPAGS
Trigger: GGACCCTGCCGGAACAAGCTGGGCCACTCCCGGGCATCTGTGATCTGGCATCGGACACAGGGTGATGCCATC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432850.1
CDS CCA 72 bp GCCCCACGTCCTGGAGCTGACACACAGCTTGGCAGGTaGACGCCGGGCACCAAGTCCGACAGGGATCAAACA +
Preference number: 6 (lower is better)
Translates to: APRPGADTQLGR*TPGTKSDRDQT
Trigger: TGTTTGATCCCTGTCGGACTTGGTGCCCGGCGTCCACCTGCCAAGCTGTGTGTCAGCTCCAGGACGTGGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320892.11
ENST00000432850.1
ENST00000467276.5
ENST00000471060.1
ENST00000480970.1
CDS CCA 72 bp ACGAGAGAAGCACGGAAGGTCAGACCTCCCCACCCCTaGCATCCACCTGCTCCGTGGCAAGGTTCTCCTGGC +
Preference number: 6 (lower is better)
Translates to: TREARKVRPPHP*HPPAPWQGSPG
Trigger: GCCAGGAGAACCTTGCCACGGAGCAGGTGGATGCCAGGGGTGGGGAGGTCTGACCTTCCGTGCTTCTCTCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471060.1
CDS CAA 90 bp GCTATGGTTGTCATCTGCTCCACTGGGTACTCCCCAAGACAGAGCTaGCAAGACACCAGCGGGTCGAGGGCCAGGTCCCAGGTGGGCCGG +
Preference number: 6 (lower is better)
Translates to: AMVVICSTGYSPRQS*QDTSGSRARSQVGR
Trigger: CCGGCCCACCTGGGACCTGGCCCTCGACCCGCTGGTGTCTTGCAAGCTCTGTCTTGGGGAGTACCCAGTGGAGCAGATGACAACCATAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320892.11
ENST00000416587.5
ENST00000432850.1
ENST00000433456.1
ENST00000471060.1
CDS CAA 90 bp ATCGGCATGGTCTCCGGGCAGCCCTGGCCAGGGTGCCAGCTGGCTTaGCAGGTGGAGCAGAATTCCATACGGCAGGCTTTGCACTGCACT +
Preference number: 6 (lower is better)
Translates to: IGMVSGQPWPGCQLA*QVEQNSIRQALHCT
Trigger: AGTGCAGTGCAAAGCCTGCCGTATGGAATTCTGCTCCACCTGCAAAGCCAGCTGGCACCCTGGCCAGGGCTGCCCGGAGACCATGCCGAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320892.11
ENST00000432850.1
ENST00000467276.5
ENST00000480970.1
CDS GCA 72 bp TCATCTGCTCCACTGGGTACTCCCCAAGACAGAGCTTaGAAGACACCAGCGGGTCGAGGGCCAGGTCCCAGG +
Preference number: 6 (lower is better)
Translates to: SSAPLGTPQDRA*KTPAGRGPGPR
Trigger: CCTGGGACCTGGCCCTCGACCCGCTGGTGTCTTGCAAGCTCTGTCTTGGGGAGTACCCAGTGGAGCAGATGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320892.11
ENST00000416587.5
ENST00000432850.1
ENST00000433456.1
ENST00000471060.1
CDS CCA 72 bp GGCAGCCCTGGCCAGGGTGCCAGCTGGCTTTGCAGGTaGAGCAGAATTCCATACGGCAGGCTTTGCACTGCA +
Preference number: 6 (lower is better)
Translates to: GSPGQGASWLCR*SRIPYGRLCTA
Trigger: TGCAGTGCAAAGCCTGCCGTATGGAATTCTGCTCCACCTGCAAAGCCAGCTGGCACCCTGGCCAGGGCTGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320892.11
ENST00000432850.1
ENST00000467276.5
ENST00000480970.1
CDS CAA 72 bp GTCATCTGCTCCACTGGGTACTCCCCAAGACAGAGCTaGCAAGACACCAGCGGGTCGAGGGCCAGGTCCCAG +
Preference number: 6 (lower is better)
Translates to: VICSTGYSPRQS*QDTSGSRARSQ
Trigger: CTGGGACCTGGCCCTCGACCCGCTGGTGTCTTGCAAGCTCTGTCTTGGGGAGTACCCAGTGGAGCAGATGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320892.11
ENST00000416587.5
ENST00000432850.1
ENST00000433456.1
ENST00000471060.1
CDS CAA 72 bp GCGGGTCGAGGGCCAGGTCCCAGGTGGGCCGGTACCTaGTTGTGGTCATCGCAGAACAGTCTGAAACGAGAG +
Preference number: 6 (lower is better)
Translates to: AGRGPGPRWAGT*LWSSQNSLKRE
Trigger: CTCTCGTTTCAGACTGTTCTGCGATGACCACAACAAGGTACCGGCCCACCTGGGACCTGGCCCTCGACCCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471060.1
CDS CAA 90 bp ACACCAGCGGGTCGAGGGCCAGGTCCCAGGTGGGCCGGTACCTTGTaGTGGTCATCGCAGAACAGTCTGAAACGAGAGAAGCACGGAAGG +
Preference number: 6 (lower is better)
Translates to: TPAGRGPGPRWAGTL*WSSQNSLKREKHGR
Trigger: CCTTCCGTGCTTCTCTCGTTTCAGACTGTTCTGCGATGACCACAACAAGGTACCGGCCCACCTGGGACCTGGCCCTCGACCCGCTGGTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471060.1
CDS CCA 72 bp GTCTCTGCCCTCAGGTCAGGCACCCATAGGGAGAAATaGGAGAAGGTCTCTGGCACCAGGGCTCCCTGCAGA +
Preference number: 6 (lower is better)
Translates to: VSALRSGTHREK*EKVSGTRAPCR
Trigger: TCTGCAGGGAGCCCTGGTGCCAGAGACCTTCTCCCATTTCTCCCTATGGGTGCCTGACCTGAGGGCAGAGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320892.11
ENST00000416587.5
ENST00000467276.5
ENST00000480970.1
CDS CAA 72 bp GCGGGTCGAGGGCCAGGTCCCAGGTGGGCCGGTACCTaGTTGTGGTCATCGCAGAACAGTTCAGTTCTGACA +
Preference number: 6 (lower is better)
Translates to: AGRGPGPRWAGT*LWSSQNSSVLT
Trigger: TGTCAGAACTGAACTGTTCTGCGATGACCACAACAAGGTACCGGCCCACCTGGGACCTGGCCCTCGACCCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433456.1
CDS CAA 90 bp AAGACACCAGCGGGTCGAGGGCCAGGTCCCAGGTGGGCCGGTACCTaGTTGTGGTCATCGCAGAACAGTCTGAAACGAGAGAAGCACGGA +
Preference number: 6 (lower is better)
Translates to: KTPAGRGPGPRWAGT*LWSSQNSLKREKHG
Trigger: TCCGTGCTTCTCTCGTTTCAGACTGTTCTGCGATGACCACAACAAGGTACCGGCCCACCTGGGACCTGGCCCTCGACCCGCTGGTGTCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471060.1
CDS CCA 72 bp CGAGGGCCAGGTCCCAGGTGGGCCGGTACCTTGTTGTaGTCATCGCAGAACAGTTCAGTTCTGACATGGTGG +
Preference number: 6 (lower is better)
Translates to: RGPGPRWAGTLL*SSQNSSVLTWW
Trigger: CCACCATGTCAGAACTGAACTGTTCTGCGATGACCACAACAAGGTACCGGCCCACCTGGGACCTGGCCCTCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433456.1
CDS CCA 72 bp CGAGGGCCAGGTCCCAGGTGGGCCGGTACCTTGTTGTaGTCATCGCAGAACAGTCTGAAACGAGAGAAGCAC +
Preference number: 6 (lower is better)
Translates to: RGPGPRWAGTLL*SSQNSLKREKH
Trigger: GTGCTTCTCTCGTTTCAGACTGTTCTGCGATGACCACAACAAGGTACCGGCCCACCTGGGACCTGGCCCTCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471060.1
CDS CAA 72 bp GGGCAGCGCTTGATGGGCGCGTCATCTTCTTCCATTTaGAAAGCAGCACTGGTCTCCCCGGGGAGGAAGGTG +
Preference number: 6 (lower is better)
Translates to: GQRLMGASSSSI*KAALVSPGRKV
Trigger: CACCTTCCTCCCCGGGGAGACCAGTGCTGCTTTCAAAATGGAAGAAGATGACGCGCCCATCAAGCGCTGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320892.11
ENST00000432850.1
CDS CAA 72 bp GGTCGAGGGCCAGGTCCCAGGTGGGCCGGTACCTTGTaGTGGTCATCGCAGAACAGTTCAGTTCTGACATGG +
Preference number: 6 (lower is better)
Translates to: GRGPGPRWAGTL*WSSQNSSVLTW
Trigger: CCATGTCAGAACTGAACTGTTCTGCGATGACCACAACAAGGTACCGGCCCACCTGGGACCTGGCCCTCGACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433456.1
CDS CAA 72 bp GGTCGAGGGCCAGGTCCCAGGTGGGCCGGTACCTTGTaGTGGTCATCGCAGAACAGTCTGAAACGAGAGAAG +
Preference number: 6 (lower is better)
Translates to: GRGPGPRWAGTL*WSSQNSLKREK
Trigger: CTTCTCTCGTTTCAGACTGTTCTGCGATGACCACAACAAGGTACCGGCCCACCTGGGACCTGGCCCTCGACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471060.1
CDS CCA 72 bp GGCAGGGATGTGTTCCAGCATCGCGCTTCCTCTAGGTaGGTAACGGGTCGTCGTCACCTTTACTGCACTTGC +
Preference number: 6 (lower is better)
Translates to: GRDVFQHRASSR*VTGRRHLYCTC
Trigger: GCAAGTGCAGTAAAGGTGACGACGACCCGTTACCCACCTAGAGGAAGCGCGATGCTGGAACACATCCCTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320892.11
CDS CCA 72 bp GCTGCAACCATGCACTCAATCTCGTTCTCCTGTAGGTaGCCCTGTTTAGGGCAGGCAGCATCTGGGCAGCTA +
Preference number: 6 (lower is better)
Translates to: AATMHSISFSCR*PCLGQAASGQL
Trigger: TAGCTGCCCAGATGCTGCCTGCCCTAAACAGGGCCACCTACAGGAGAACGAGATTGAGTGCATGGTTGCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320892.11
ENST00000432850.1
ENST00000471060.1
CDS CCA 72 bp GCATTGGCACTGGGCTATGGTTGTCATCTGCTCCACTaGGTACTCCCCAAGACAGAGCTTGCAAGACACCAG +
Preference number: 6 (lower is better)
Translates to: ALALGYGCHLLH*VLPKTELARHQ
Trigger: CTGGTGTCTTGCAAGCTCTGTCTTGGGGAGTACCCAGTGGAGCAGATGACAACCATAGCCCAGTGCCAATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320892.11
ENST00000416587.5
ENST00000432850.1
ENST00000433456.1
ENST00000471060.1
CDS TCA 72 bp CCAGGCTCAGACTGCAGAACCAGCCTACTTGTTTCCTaGGCATTCAGCTTGGTTCTGAGTCCAACCTCGAGG +
Preference number: 6 (lower is better)
Translates to: PGSDCRTSLLVS*AFSLVLSPTSR
Trigger: CCTCGAGGTTGGACTCAGAACCAAGCTGAATGCTCAGGAAACAAGTAGGCTGGTTCTGCAGTCTGAGCCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433456.1
CDS GCA 72 bp AGGTGGGTAACGGGTCGTCGTCACCTTTACTGCACTTaGACTTGCAGCAAAGTACAAAGGGAGTGGCCAGGA +
Preference number: 6 (lower is better)
Translates to: RWVTGRRHLYCT*TCSKVQREWPG
Trigger: TCCTGGCCACTCCCTTTGTACTTTGCTGCAAGTGCAAGTGCAGTAAAGGTGACGACGACCCGTTACCCACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320892.11
CDS CCA 72 bp GGCACAGAGTACAGAAGATGCATTGGCACTGGGCTATaGTTGTCATCTGCTCCACTGGGTACTCCCCAAGAC +
Preference number: 6 (lower is better)
Translates to: GTEYRRCIGTGL*LSSAPLGTPQD
Trigger: GTCTTGGGGAGTACCCAGTGGAGCAGATGACAACCATAGCCCAGTGCCAATGCATCTTCTGTACTCTGTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320892.11
ENST00000416587.5
ENST00000432850.1
ENST00000433456.1
ENST00000471060.1
CDS CAA 72 bp GGTAACGGGTCGTCGTCACCTTTACTGCACTTGCACTaGCAGCAAAGTACAAAGGGAGTGGCCAGGAGTAGG +
Preference number: 6 (lower is better)
Translates to: GNGSSSPLLHLH*QQSTKGVARSR
Trigger: CCTACTCCTGGCCACTCCCTTTGTACTTTGCTGCAAGTGCAAGTGCAGTAAAGGTGACGACGACCCGTTACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320892.11
CDS GCA 72 bp CAGAAGATGCATTGGCACTGGGCTATGGTTGTCATCTaGTCCACTGGGTACTCCCCAAGACAGAGCTTGCAA +
Preference number: 6 (lower is better)
Translates to: QKMHWHWAMVVI*STGYSPRQSLQ
Trigger: TTGCAAGCTCTGTCTTGGGGAGTACCCAGTGGAGCAGATGACAACCATAGCCCAGTGCCAATGCATCTTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320892.11
ENST00000416587.5
ENST00000432850.1
ENST00000433456.1
ENST00000471060.1
CDS GCA 72 bp TCCTCTAGGTGGGTAACGGGTCGTCGTCACCTTTACTaGACTTGCACTTGCAGCAAAGTACAAAGGGAGTGG +
Preference number: 6 (lower is better)
Translates to: SSRWVTGRRHLY*TCTCSKVQREW
Trigger: CCACTCCCTTTGTACTTTGCTGCAAGTGCAAGTGCAGTAAAGGTGACGACGACCCGTTACCCACCTAGAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320892.11
CDS CAA 90 bp GTTTCAGGCACAGAGTACAGAAGATGCATTGGCACTGGGCTATGGTaGTCATCTGCTCCACTGGGTACTCCCCAAGACAGAGCTTGCAAG +
Preference number: 6 (lower is better)
Translates to: VSGTEYRRCIGTGLW*SSAPLGTPQDRACK
Trigger: CTTGCAAGCTCTGTCTTGGGGAGTACCCAGTGGAGCAGATGACAACCATAGCCCAGTGCCAATGCATCTTCTGTACTCTGTGCCTGAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320892.11
ENST00000416587.5
ENST00000432850.1
ENST00000433456.1
ENST00000471060.1
CDS CCA 72 bp TGTTTCAGGCACAGAGTACAGAAGATGCATTGGCACTaGGCTATGGTTGTCATCTGCTCCACTGGGTACTCC +
Preference number: 6 (lower is better)
Translates to: CFRHRVQKMHWH*AMVVICSTGYS
Trigger: GGAGTACCCAGTGGAGCAGATGACAACCATAGCCCAGTGCCAATGCATCTTCTGTACTCTGTGCCTGAAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320892.11
ENST00000416587.5
ENST00000432850.1
ENST00000433456.1
ENST00000471060.1
CDS CAA 72 bp ACAGAGTACAGAAGATGCATTGGCACTGGGCTATGGTaGTCATCTGCTCCACTGGGTACTCCCCAAGACAGA +
Preference number: 6 (lower is better)
Translates to: TEYRRCIGTGLW*SSAPLGTPQDR
Trigger: TCTGTCTTGGGGAGTACCCAGTGGAGCAGATGACAACCATAGCCCAGTGCCAATGCATCTTCTGTACTCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320892.11
ENST00000416587.5
ENST00000432850.1
ENST00000433456.1
ENST00000471060.1
CDS CCA 72 bp ACATACTGTTTCAGGCACAGAGTACAGAAGATGCATTaGCACTGGGCTATGGTTGTCATCTGCTCCACTGGG +
Preference number: 6 (lower is better)
Translates to: TYCFRHRVQKMH*HWAMVVICSTG
Trigger: CCCAGTGGAGCAGATGACAACCATAGCCCAGTGCCAATGCATCTTCTGTACTCTGTGCCTGAAACAGTATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320892.11
ENST00000416587.5
ENST00000432850.1
ENST00000433456.1
ENST00000471060.1
CDS CAA 72 bp AACATACTGTTTCAGGCACAGAGTACAGAAGATGCATaGGCACTGGGCTATGGTTGTCATCTGCTCCACTGG +
Preference number: 6 (lower is better)
Translates to: NILFQAQSTEDA*ALGYGCHLLHW
Trigger: CCAGTGGAGCAGATGACAACCATAGCCCAGTGCCAATGCATCTTCTGTACTCTGTGCCTGAAACAGTATGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320892.11
ENST00000416587.5
ENST00000432850.1
ENST00000433456.1
ENST00000471060.1
CDS CAA 90 bp GGGCAGGCAGCATCTGGGCAGCTAATTGCGGTTTCTAATCCTTCTTaGATCAAGAGCTCAACATACTGTTTCAGGCACAGAGTACAGAAG +
Preference number: 6 (lower is better)
Translates to: GQAASGQLIAVSNPS*IKSSTYCFRHRVQK
Trigger: CTTCTGTACTCTGTGCCTGAAACAGTATGTTGAGCTCTTGATCAAAGAAGGATTAGAAACCGCAATTAGCTGCCCAGATGCTGCCTGCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320892.11
ENST00000432850.1
ENST00000471060.1
CDS CAA 72 bp GCATCTGGGCAGCTAATTGCGGTTTCTAATCCTTCTTaGATCAAGAGCTCAACATACTGTTTCAGGCACAGA +
Preference number: 6 (lower is better)
Translates to: ASGQLIAVSNPS*IKSSTYCFRHR
Trigger: TCTGTGCCTGAAACAGTATGTTGAGCTCTTGATCAAAGAAGGATTAGAAACCGCAATTAGCTGCCCAGATGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320892.11
ENST00000432850.1
ENST00000471060.1