RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RNF135 (Homo sapiens)

Ensembl gene IDs: ENSG00000181481

Ensembl transcript IDs: ENST00000324689.8, ENST00000328381.10, ENST00000443677.6, ENST00000535306.6, ENST00000580444.2

Found 245 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TCCCAGGACCTGGTCGCGGCTCATCTCCCAGGAAGCCACCCCAACTaGCCAGTGGCTGCAATTCCTAGTGTCCACTTCCCAGTAATGCTT +
Preference number: 1 (lower is better)
Translates to: SQDLVAAHLPGSHPN*PVAAIPSVHFPVML
Trigger: AAGCATTACTGGGAAGTGGACACTAGGAATTGCAGCCACTGGGCAGTTGGGGTGGCTTCCTGGGAGATGAGCCGCGACCAGGTCCTGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324689.8
ENST00000443677.6
ENST00000535306.6
3UTR CCA 90 bp GACCTGGCTGGTAGAAAACCTCTCACAGCTCCAGCGATAGGGTTGTaGGCGGTGAGACACAGTCACTGTACGGGAATCCTTGGACACCTC +
Preference number: 1 (lower is better)
Translates to: DLAGRKPLTAPAIGL*AVRHSHCTGILGHL
Trigger: GAGGTGTCCAAGGATTCCCGTACAGTGACTGTGTCTCACCGCCCACAACCCTATCGCTGGAGCTGTGAGAGGTTTTCTACCAGCCAGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324689.8
ENST00000443677.6
ENST00000535306.6
3UTR CCA 90 bp AGCCATACAGCCAGAAGGCAGGGTACAAAGGAGAGGAGGCAGAGATaGTACACTCATACAGAAGCTTCTCCTGATTGTCCACTGAATAGA +
Preference number: 1 (lower is better)
Translates to: SHTARRQGTKERRQR*YTHTEASPDCPLNR
Trigger: TCTATTCAGTGGACAATCAGGAGAAGCTTCTGTATGAGTGTACCATCTCTGCCTCCTCTCCTTTGTACCCTGCCTTCTGGCTGTATGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324689.8
ENST00000443677.6
ENST00000535306.6
3UTR CCA 90 bp TTAGAGGTTATCTCCCAGGAGCCAGGCAGGGGCCTATTCTTTATTTaGAATGTCCAGGGTTCAAACATCCCAAGTTCATCCTGTATCACA +
Preference number: 1 (lower is better)
Translates to: LEVISQEPGRGLFFI*NVQGSNIPSSSCIT
Trigger: TGTGATACAGGATGAACTTGGGATGTTTGAACCCTGGACATTCCAAATAAAGAATAGGCCCCTGCCTGGCTCCTGGGAGATAACCTCTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324689.8
ENST00000328381.10
ENST00000535306.6
3UTR TCA 90 bp TTCAGGATAATGCTTAATTCTCCCAGCAATGATGTGTGGCTACAATaGTGTGTGCACAGAGTATTACCAACCAGAGTAGCTCACCCATGC +
Preference number: 1 (lower is better)
Translates to: FRIMLNSPSNDVWLQ*CVHRVLPTRVAHPC
Trigger: GCATGGGTGAGCTACTCTGGTTGGTAATACTCTGTGCACACATCATTGTAGCCACACATCATTGCTGGGAGAATTAAGCATTATCCTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324689.8
ENST00000328381.10
ENST00000535306.6
3UTR-3UTR CCA 90 bp GGCAGGGTACAAAGGAGAGGAGGCAGAGATGGTACACTCATACAGAAGCTTCTCGTCCTTCCCAGGACCTaGTCGCGGCTCATCTCCCAG +
Preference number: 2 (lower is better)
Translates to: GRVQRRGGRDGTLIQKLLVLPRT*SRLISQ
Trigger: CTGGGAGATGAGCCGCGACCAGGTCCTGGGAAGGAC...GAGAAGCTTCTGTATGAGTGTACCATCTCTGCCTCCTCTCCTTTGTACCCTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324689.8
ENST00000443677.6
ENST00000535306.6
3UTR-3UTR CCA 90 bp CCCAACTGCCCAGTGGCTGCAATTCCTAGTGTCCACTTCCCAGTAATGCTTTCCCCAGCGATAGGGTTGTaGGCGGTGAGACACAGTCAC +
Preference number: 2 (lower is better)
Translates to: PNCPVAAIPSVHFPVMLSPAIGL*AVRHSH
Trigger: GTGACTGTGTCTCACCGCCCACAACCCTATCGCTGG...GGAAAGCATTACTGGGAAGTGGACACTAGGAATTGCAGCCACTGGGCAGTTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324689.8
ENST00000443677.6
ENST00000535306.6
3UTR-3UTR CCA 90 bp AAGGCAGGGTACAAAGGAGAGGAGGCAGAGATGGTACACTCATACAGAAGCTTCCTGTACGGGAATCCTTaGACACCTCCAGGCTGCAGG +
Preference number: 2 (lower is better)
Translates to: KAGYKGEEAEMVHSYRSFLYGNP*TPPGCR
Trigger: CCTGCAGCCTGGAGGTGTCCAAGGATTCCCGTACAG...GAAGCTTCTGTATGAGTGTACCATCTCTGCCTCCTCTCCTTTGTACCCTGCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324689.8
ENST00000443677.6
ENST00000535306.6
3UTR-3UTR CCA 90 bp AGGTGTCCAGGGCTTTTACTAGGGATTGATCACATTGGCATGCTTCACTGCCCACCAGCGATAGGGTTGTaGGCGGTGAGACACAGTCAC +
Preference number: 2 (lower is better)
Translates to: RCPGLLLGIDHIGMLHCPPAIGL*AVRHSH
Trigger: GTGACTGTGTCTCACCGCCCACAACCCTATCGCTGG...TGGGCAGTGAAGCATGCCAATGTGATCAATCCCTAGTAAAAGCCCTGGACACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324689.8
ENST00000535306.6
3UTR-3UTR CCA 90 bp TTTCCAGGATGTAAGCCATACAGCCAGAAGGCAGGGTACAAAGGAGAGGAGGCAACCCCAACTGCCCAGTaGCTGCAATTCCTAGTGTCC +
Preference number: 2 (lower is better)
Translates to: FPGCKPYSQKAGYKGEEATPTAQ*LQFLVS
Trigger: GGACACTAGGAATTGCAGCCACTGGGCAGTTGGGGT...TGCCTCCTCTCCTTTGTACCCTGCCTTCTGGCTGTATGGCTTACATCCTGGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324689.8
ENST00000443677.6
ENST00000535306.6
3UTR-3UTR CCA 90 bp TGTCCAGGGCTTTTACTAGGGATTGATCACATTGGCATGCTTCACTGCCCACATCTGTACGGGAATCCTTaGACACCTCCAGGCTGCAGG +
Preference number: 2 (lower is better)
Translates to: CPGLLLGIDHIGMLHCPHLYGNP*TPPGCR
Trigger: CCTGCAGCCTGGAGGTGTCCAAGGATTCCCGTACAG...ATGTGGGCAGTGAAGCATGCCAATGTGATCAATCCCTAGTAAAAGCCCTGGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324689.8
ENST00000535306.6
3UTR-3UTR CCA 90 bp ATGCCTAGGTGTCCAGGGCTTTTACTAGGGATTGATCACATTGGCATGCTTCACCCAGCGATAGGGTTGTaGGCGGTGAGACACAGTCAC +
Preference number: 2 (lower is better)
Translates to: MPRCPGLLLGIDHIGMLHPAIGL*AVRHSH
Trigger: GTGACTGTGTCTCACCGCCCACAACCCTATCGCTGG...GTGAAGCATGCCAATGTGATCAATCCCTAGTAAAAGCCCTGGACACCTAGGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324689.8
ENST00000535306.6
3UTR-3UTR CCA 90 bp CAGGGTACAAAGGAGAGGAGGCAGAGATGGTACACTCATACAGAAGCTTCTCCTTGCCATGCAGAGAGCTaGCTAGTCCCCTTCCATTCC +
Preference number: 2 (lower is better)
Translates to: QGTKERRQRWYTHTEASPCHAES*LVPFHS
Trigger: GGAATGGAAGGGGACTAGCCAGCTCTCTGCATGGCA...AGGAGAAGCTTCTGTATGAGTGTACCATCTCTGCCTCCTCTCCTTTGTACCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324689.8
ENST00000443677.6
ENST00000535306.6
3UTR-3UTR GCA 90 bp ACAGGGAGAGAGACCAGGAAACCACTGTGTTGTAATCCCTTAGGAAACCTTACAGGAAGCCACCCCAACTaGCCAGTGGCTGCAATTCCT +
Preference number: 2 (lower is better)
Translates to: TGRETRKPLCCNPLGNLTGSHPN*PVAAIP
Trigger: AGGAATTGCAGCCACTGGGCAGTTGGGGTGGCTTCC...TGTAAGGTTTCCTAAGGGATTACAACACAGTGGTTTCCTGGTCTCTCTCCCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324689.8
ENST00000443677.6
ENST00000535306.6
3UTR-3UTR GCA 90 bp TCCTCTCCTGGCAGAGTCTTCAGGATAATGCTTAATTCTCCCAGCAATGATGTGGGAAGCCACCCCAACTaGCCAGTGGCTGCAATTCCT +
Preference number: 2 (lower is better)
Translates to: SSPGRVFRIMLNSPSNDVGSHPN*PVAAIP
Trigger: AGGAATTGCAGCCACTGGGCAGTTGGGGTGGCTTCC...CACATCATTGCTGGGAGAATTAAGCATTATCCTGAAGACTCTGCCAGGAGAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324689.8
ENST00000535306.6
3UTR-3UTR CCA 90 bp AGAGAGACCAGGAAACCACTGTGTTGTAATCCCTTAGGAAACCTTACACCTTTAGTCCTTCCCAGGACCTaGTCGCGGCTCATCTCCCAG +
Preference number: 2 (lower is better)
Translates to: RETRKPLCCNPLGNLTPLVLPRT*SRLISQ
Trigger: CTGGGAGATGAGCCGCGACCAGGTCCTGGGAAGGAC...TAAAGGTGTAAGGTTTCCTAAGGGATTACAACACAGTGGTTTCCTGGTCTCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324689.8
ENST00000443677.6
ENST00000535306.6
3UTR-3UTR CCA 90 bp TGTCCAGGGCTTTTACTAGGGATTGATCACATTGGCATGCTTCACTGCCCACATTGCCATGCAGAGAGCTaGCTAGTCCCCTTCCATTCC +
Preference number: 2 (lower is better)
Translates to: CPGLLLGIDHIGMLHCPHCHAES*LVPFHS
Trigger: GGAATGGAAGGGGACTAGCCAGCTCTCTGCATGGCA...ATGTGGGCAGTGAAGCATGCCAATGTGATCAATCCCTAGTAAAAGCCCTGGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324689.8
ENST00000535306.6
3UTR-3UTR CCA 90 bp AAGGAGAGGAGGCAGAGATGGTACACTCATACAGAAGCTTCTCCTGATTGTCCATGCCATGCAGAGAGCTaGCTAGTCCCCTTCCATTCC +
Preference number: 2 (lower is better)
Translates to: KERRQRWYTHTEASPDCPCHAES*LVPFHS
Trigger: GGAATGGAAGGGGACTAGCCAGCTCTCTGCATGGCA...TGGACAATCAGGAGAAGCTTCTGTATGAGTGTACCATCTCTGCCTCCTCTCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324689.8
ENST00000443677.6
ENST00000535306.6
3UTR-3UTR TCA 90 bp AGGTGTCCAGGGCTTTTACTAGGGATTGATCACATTGGCATGCTTCACTGCCCACAAGGACAGTTTCCTTaGCCATGTGCCATGCAGAGA +
Preference number: 2 (lower is better)
Translates to: RCPGLLLGIDHIGMLHCPQGQFP*PCAMQR
Trigger: TCTCTGCATGGCACATGGTCAAGGAAACTGTCCTTG...TGGGCAGTGAAGCATGCCAATGTGATCAATCCCTAGTAAAAGCCCTGGACACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324689.8
ENST00000535306.6
3UTR-3UTR TCA 90 bp AGGAGGCAGAGATGGTACACTCATACAGAAGCTTCTCCTGATTGTCCACTGAATCACCCCAGGTCTGTCTaGGCCAAGGACAGTTTCCTT +
Preference number: 2 (lower is better)
Translates to: RRQRWYTHTEASPDCPLNHPRSV*AKDSFL
Trigger: AAGGAAACTGTCCTTGGCTCAGACAGACCTGGGGTG...ATTCAGTGGACAATCAGGAGAAGCTTCTGTATGAGTGTACCATCTCTGCCTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324689.8
ENST00000443677.6
ENST00000535306.6
3UTR-3UTR CCA 90 bp GACAGTTTCCTTGACCATGTGCCATGCAGAGAGCTGGCTAGTCCCCTTCCATTCTGGGAACATAAGACCTaGCTGGTAGAAAACCTCTCA +
Preference number: 2 (lower is better)
Translates to: DSFLDHVPCRELASPLPFWEHKT*LVENLS
Trigger: TGAGAGGTTTTCTACCAGCCAGGTCTTATGTTCCCA...GAATGGAAGGGGACTAGCCAGCTCTCTGCATGGCACATGGTCAAGGAAACTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324689.8
ENST00000443677.6
ENST00000535306.6
3UTR-3UTR CCA 90 bp ACAGGGAGAGAGACCAGGAAACCACTGTGTTGTAATCCCTTAGGAAACCTTACAACCCCAACTGCCCAGTaGCTGCAATTCCTAGTGTCC +
Preference number: 2 (lower is better)
Translates to: TGRETRKPLCCNPLGNLTTPTAQ*LQFLVS
Trigger: GGACACTAGGAATTGCAGCCACTGGGCAGTTGGGGT...TGTAAGGTTTCCTAAGGGATTACAACACAGTGGTTTCCTGGTCTCTCTCCCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324689.8
ENST00000443677.6
ENST00000535306.6
3UTR-3UTR CCA 90 bp TCCTCTCCTGGCAGAGTCTTCAGGATAATGCTTAATTCTCCCAGCAATGATGTGACCCCAACTGCCCAGTaGCTGCAATTCCTAGTGTCC +
Preference number: 2 (lower is better)
Translates to: SSPGRVFRIMLNSPSNDVTPTAQ*LQFLVS
Trigger: GGACACTAGGAATTGCAGCCACTGGGCAGTTGGGGT...CACATCATTGCTGGGAGAATTAAGCATTATCCTGAAGACTCTGCCAGGAGAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324689.8
ENST00000535306.6
3UTR CAA 90 bp CTTAGAGGTTATCTCCCAGGAGCCAGGCAGGGGCCTATTCTTTATTaGGAATGTCCAGGGTTCAAACATCCCAAGTTCATCCTGTATCAC +
Preference number: 2 (lower is better)
Translates to: LRGYLPGARQGPILY*ECPGFKHPKFILYH
Trigger: GTGATACAGGATGAACTTGGGATGTTTGAACCCTGGACATTCCAAATAAAGAATAGGCCCCTGCCTGGCTCCTGGGAGATAACCTCTAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324689.8
ENST00000328381.10
ENST00000535306.6
3UTR-3UTR GCA 90 bp GGTAAGGTCCAAGAGAACTTCCAATTATCCTCTCCTGGCAGAGTCTTCAGGATAGTTTCCTTGACCATGTaGCATGCAGAGAGCTGGCTA +
Preference number: 2 (lower is better)
Translates to: GKVQENFQLSSPGRVFRIVSLTM*HAESWL
Trigger: TAGCCAGCTCTCTGCATGGCACATGGTCAAGGAAAC...TATCCTGAAGACTCTGCCAGGAGAGGATAATTGGAAGTTCTCTTGGACCTTACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324689.8
ENST00000535306.6
3UTR-3UTR GCA 90 bp CTGTGTTGTAATCCCTTAGGAAACCTTACACCTTTACTTGCTTTATTATCAGGTGGAAGCCACCCCAACTaGCCAGTGGCTGCAATTCCT +
Preference number: 2 (lower is better)
Translates to: LCCNPLGNLTPLLALLSGGSHPN*PVAAIP
Trigger: AGGAATTGCAGCCACTGGGCAGTTGGGGTGGCTTCC...ACCTGATAATAAAGCAAGTAAAGGTGTAAGGTTTCCTAAGGGATTACAACACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324689.8
ENST00000443677.6
ENST00000535306.6
3UTR-3UTR GCA 90 bp AGAGAGACCAGGAAACCACTGTGTTGTAATCCCTTAGGAAACCTTACACCTTTAGTTTCCTTGACCATGTaGCATGCAGAGAGCTGGCTA +
Preference number: 2 (lower is better)
Translates to: RETRKPLCCNPLGNLTPLVSLTM*HAESWL
Trigger: TAGCCAGCTCTCTGCATGGCACATGGTCAAGGAAAC...TAAAGGTGTAAGGTTTCCTAAGGGATTACAACACAGTGGTTTCCTGGTCTCTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324689.8
ENST00000443677.6
ENST00000535306.6
3UTR-3UTR GCA 90 bp CTGTGTTGTAATCCCTTAGGAAACCTTACACCTTTACTTGCTTTATTATCAGGTCAAGGTTCAGCCAGATaGCCACCACCCCAGGTCTGT +
Preference number: 2 (lower is better)
Translates to: LCCNPLGNLTPLLALLSGQGSAR*PPPQVC
Trigger: ACAGACCTGGGGTGGTGGGCATCTGGCTGAACCTTG...ACCTGATAATAAAGCAAGTAAAGGTGTAAGGTTTCCTAAGGGATTACAACACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324689.8
ENST00000443677.6
ENST00000535306.6
3UTR-3UTR GCA 90 bp CAAGAGAACTTCCAATTATCCTCTCCTGGCAGAGTCTTCAGGATAATGCTTAATAGAGTAGCTCACCCATaGCTAGGTGTCCAGGGCTTT +
Preference number: 2 (lower is better)
Translates to: QENFQLSSPGRVFRIMLNRVAHP*LGVQGF
Trigger: AAAGCCCTGGACACCTAGGCATGGGTGAGCTACTCT...ATTAAGCATTATCCTGAAGACTCTGCCAGGAGAGGATAATTGGAAGTTCTCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324689.8
ENST00000328381.10
ENST00000535306.6
3UTR-3UTR CCA 90 bp GGTAAGGTCCAAGAGAACTTCCAATTATCCTCTCCTGGCAGAGTCTTCAGGATATGGGAACATAAGACCTaGCTGGTAGAAAACCTCTCA +
Preference number: 2 (lower is better)
Translates to: GKVQENFQLSSPGRVFRIWEHKT*LVENLS
Trigger: TGAGAGGTTTTCTACCAGCCAGGTCTTATGTTCCCA...TATCCTGAAGACTCTGCCAGGAGAGGATAATTGGAAGTTCTCTTGGACCTTACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324689.8
ENST00000535306.6
3UTR-3UTR TCA 90 bp CTGTGTTGTAATCCCTTAGGAAACCTTACACCTTTACTTGCTTTATTATCAGGTCACCCCAGGTCTGTCTaGGCCAAGGACAGTTTCCTT +
Preference number: 2 (lower is better)
Translates to: LCCNPLGNLTPLLALLSGHPRSV*AKDSFL
Trigger: AAGGAAACTGTCCTTGGCTCAGACAGACCTGGGGTG...ACCTGATAATAAAGCAAGTAAAGGTGTAAGGTTTCCTAAGGGATTACAACACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324689.8
ENST00000443677.6
ENST00000535306.6
3UTR-3UTR TCA 90 bp GTTCATCCTGTATCACACAAAAGGATTAACTTCAAAAGTGGTATTCTTGGCCAGCAAGGACAGTTTCCTTaGCCATGTGCCATGCAGAGA +
Preference number: 2 (lower is better)
Translates to: VHPVSHKRINFKSGILGQQGQFP*PCAMQR
Trigger: TCTCTGCATGGCACATGGTCAAGGAAACTGTCCTTG...CTGGCCAAGAATACCACTTTTGAAGTTAATCCTTTTGTGTGATACAGGATGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324689.8
ENST00000535306.6
3UTR CCA 72 bp TCCACACAACAAGAGTCCATAGTCCTTCCCAGGACCTaGTCGCGGCTCATCTCCCAGGAAGCCACCCCAACT +
Preference number: 3 (lower is better)
Translates to: STQQESIVLPRT*SRLISQEATPT
Trigger: AGTTGGGGTGGCTTCCTGGGAGATGAGCCGCGACCAGGTCCTGGGAAGGACTATGGACTCTTGTTGTGTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324689.8
ENST00000443677.6
ENST00000535306.6
3UTR TCA 72 bp AAGGTTCAGCCAGATGCCCACCACCCCAGGTCTGTCTaGGCCAAGGACAGTTTCCTTGACCATGTGCCATGC +
Preference number: 3 (lower is better)
Translates to: KVQPDAHHPRSV*AKDSFLDHVPC
Trigger: GCATGGCACATGGTCAAGGAAACTGTCCTTGGCTCAGACAGACCTGGGGTGGTGGGCATCTGGCTGAACCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324689.8
ENST00000443677.6
ENST00000535306.6
3UTR-3UTR CAA 90 bp GGCAGGGTACAAAGGAGAGGAGGCAGAGATGGTACACTCATACAGAAGCTTCTCGCTCCAGCGATAGGGTaGTGGGCGGTGAGACACAGT +
Preference number: 3 (lower is better)
Translates to: GRVQRRGGRDGTLIQKLLAPAIG*WAVRHS
Trigger: ACTGTGTCTCACCGCCCACAACCCTATCGCTGGAGC...GAGAAGCTTCTGTATGAGTGTACCATCTCTGCCTCCTCTCCTTTGTACCCTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324689.8
ENST00000443677.6
ENST00000535306.6
3UTR-3UTR CAA 90 bp AAGGCAGGGTACAAAGGAGAGGAGGCAGAGATGGTACACTCATACAGAAGCTTCGCTCCAGCGATAGGGTaGTGGGCGGTGAGACACAGT +
Preference number: 3 (lower is better)
Translates to: KAGYKGEEAEMVHSYRSFAPAIG*WAVRHS
Trigger: ACTGTGTCTCACCGCCCACAACCCTATCGCTGGAGC...GAAGCTTCTGTATGAGTGTACCATCTCTGCCTCCTCTCCTTTGTACCCTGCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324689.8
ENST00000443677.6
ENST00000535306.6
3UTR CCA 72 bp GGTAGAAAACCTCTCACAGCTCCAGCGATAGGGTTGTaGGCGGTGAGACACAGTCACTGTACGGGAATCCTT +
Preference number: 3 (lower is better)
Translates to: GRKPLTAPAIGL*AVRHSHCTGIL
Trigger: AAGGATTCCCGTACAGTGACTGTGTCTCACCGCCCACAACCCTATCGCTGGAGCTGTGAGAGGTTTTCTACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324689.8
ENST00000443677.6
ENST00000535306.6
3UTR-3UTR CAA 90 bp AGGTGTCCAGGGCTTTTACTAGGGATTGATCACATTGGCATGCTTCACTGCCCAACTGTACGGGAATCCTaGGACACCTCCAGGCTGCAG +
Preference number: 3 (lower is better)
Translates to: RCPGLLLGIDHIGMLHCPTVRES*DTSRLQ
Trigger: CTGCAGCCTGGAGGTGTCCAAGGATTCCCGTACAGT...TGGGCAGTGAAGCATGCCAATGTGATCAATCCCTAGTAAAAGCCCTGGACACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324689.8
ENST00000535306.6
3UTR-3UTR CAA 90 bp CAGGGTACAAAGGAGAGGAGGCAGAGATGGTACACTCATACAGAAGCTTCTCCTACTGTACGGGAATCCTaGGACACCTCCAGGCTGCAG +
Preference number: 3 (lower is better)
Translates to: QGTKERRQRWYTHTEASPTVRES*DTSRLQ
Trigger: CTGCAGCCTGGAGGTGTCCAAGGATTCCCGTACAGT...AGGAGAAGCTTCTGTATGAGTGTACCATCTCTGCCTCCTCTCCTTTGTACCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324689.8
ENST00000443677.6
ENST00000535306.6
3UTR-3UTR CAA 90 bp AGGAGGCAGAGATGGTACACTCATACAGAAGCTTCTCCTGATTGTCCACTGAATACTGTACGGGAATCCTaGGACACCTCCAGGCTGCAG +
Preference number: 3 (lower is better)
Translates to: RRQRWYTHTEASPDCPLNTVRES*DTSRLQ
Trigger: CTGCAGCCTGGAGGTGTCCAAGGATTCCCGTACAGT...ATTCAGTGGACAATCAGGAGAAGCTTCTGTATGAGTGTACCATCTCTGCCTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324689.8
ENST00000443677.6
ENST00000535306.6
3UTR-3UTR CAA 90 bp CAGGGTACAAAGGAGAGGAGGCAGAGATGGTACACTCATACAGAAGCTTCTCCTCCAAGGACAGTTTCCTaGACCATGTGCCATGCAGAG +
Preference number: 3 (lower is better)
Translates to: QGTKERRQRWYTHTEASPPRTVS*TMCHAE
Trigger: CTCTGCATGGCACATGGTCAAGGAAACTGTCCTTGG...AGGAGAAGCTTCTGTATGAGTGTACCATCTCTGCCTCCTCTCCTTTGTACCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324689.8
ENST00000443677.6
ENST00000535306.6
3UTR-3UTR CAA 90 bp AGGTGTCCAGGGCTTTTACTAGGGATTGATCACATTGGCATGCTTCACTGCCCACCAAGGACAGTTTCCTaGACCATGTGCCATGCAGAG +
Preference number: 3 (lower is better)
Translates to: RCPGLLLGIDHIGMLHCPPRTVS*TMCHAE
Trigger: CTCTGCATGGCACATGGTCAAGGAAACTGTCCTTGG...TGGGCAGTGAAGCATGCCAATGTGATCAATCCCTAGTAAAAGCCCTGGACACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324689.8
ENST00000535306.6
3UTR-3UTR CAA 90 bp TGTCCAGGGCTTTTACTAGGGATTGATCACATTGGCATGCTTCACTGCCCACATAGGTGGGAGGACTGCTaGAGACCAGGAATTCGACAC +
Preference number: 3 (lower is better)
Translates to: CPGLLLGIDHIGMLHCPHRWEDC*RPGIRH
Trigger: GTGTCGAATTCCTGGTCTCAAGCAGTCCTCCCACCT...ATGTGGGCAGTGAAGCATGCCAATGTGATCAATCCCTAGTAAAAGCCCTGGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324689.8
ENST00000328381.10
ENST00000535306.6
3UTR CCA 72 bp GCCAGAAGGCAGGGTACAAAGGAGAGGAGGCAGAGATaGTACACTCATACAGAAGCTTCTCCTGATTGTCCA +
Preference number: 3 (lower is better)
Translates to: ARRQGTKERRQR*YTHTEASPDCP
Trigger: TGGACAATCAGGAGAAGCTTCTGTATGAGTGTACCATCTCTGCCTCCTCTCCTTTGTACCCTGCCTTCTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324689.8
ENST00000443677.6
ENST00000535306.6
3UTR CCA 72 bp ATCTCCCAGGAGCCAGGCAGGGGCCTATTCTTTATTTaGAATGTCCAGGGTTCAAACATCCCAAGTTCATCC +
Preference number: 3 (lower is better)
Translates to: ISQEPGRGLFFI*NVQGSNIPSSS
Trigger: GGATGAACTTGGGATGTTTGAACCCTGGACATTCCAAATAAAGAATAGGCCCCTGCCTGGCTCCTGGGAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324689.8
ENST00000328381.10
ENST00000535306.6
3UTR TCA 72 bp GGTACACTCATACAGAAGCTTCTCCTGATTGTCCACTaGATAGAAGGCAAGCTTTCCCTCCTCAAGGTTCAG +
Preference number: 3 (lower is better)
Translates to: GTLIQKLLLIVH*IEGKLSLLKVQ
Trigger: CTGAACCTTGAGGAGGGAAAGCTTGCCTTCTATTCAGTGGACAATCAGGAGAAGCTTCTGTATGAGTGTACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324689.8
ENST00000443677.6
ENST00000535306.6
3UTR TCA 72 bp ATGCTTAATTCTCCCAGCAATGATGTGTGGCTACAATaGTGTGTGCACAGAGTATTACCAACCAGAGTAGCT +
Preference number: 3 (lower is better)
Translates to: MLNSPSNDVWLQ*CVHRVLPTRVA
Trigger: AGCTACTCTGGTTGGTAATACTCTGTGCACACATCATTGTAGCCACACATCATTGCTGGGAGAATTAAGCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324689.8
ENST00000328381.10
ENST00000535306.6
CDS-3UTR GCA 90 bp GAGTCCATAGTCCTTCCCAGGACCTGGTCGCGGCTCATCTCCCAGGAAGCCACCGTGTTCTTCCGCAGGTaGGGCTGCTGCGCGGCGCCC +
Preference number: 4 (lower is better)
Translates to: ESIVLPRTWSRLISQEATVFFRR*GCCAAP
Trigger: GGGCGCCGCGCAGCAGCCGCACCTGCGGAAGAACAC...GGTGGCTTCCTGGGAGATGAGCCGCGACCAGGTCCTGGGAAGGACTATGGACTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324689.8
ENST00000443677.6
ENST00000535306.6
CDS-3UTR TCA 90 bp GACACAGTCACTGTACGGGAATCCTTGGACACCTCCAGGCTGCAGGAAAGGCTCCGCGGACGTCGGGGTTaGGCCGGGCGAGTCTCCTCA +
Preference number: 4 (lower is better)
Translates to: DTVTVRESLDTSRLQERLRGRRG*AGRVSS
Trigger: TGAGGAGACTCGCCCGGCTCAACCCCGACGTCCGCG...GAGCCTTTCCTGCAGCCTGGAGGTGTCCAAGGATTCCCGTACAGTGACTGTGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443677.6
CDS-3UTR CCA 90 bp TTTCCAGGATGTAAGCCATACAGCCAGAAGGCAGGGTACAAAGGAGAGGAGGCAGCCTCGCGGCCGCGCTaGAGAGGGAACTGGAGCCCG +
Preference number: 4 (lower is better)
Translates to: FPGCKPYSQKAGYKGEEAASRPR*RGNWSP
Trigger: CGGGCTCCAGTTCCCTCTCCAGCGCGGCCGCGAGGC...TGCCTCCTCTCCTTTGTACCCTGCCTTCTGGCTGTATGGCTTACATCCTGGAAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324689.8
ENST00000443677.6
ENST00000535306.6
CDS-3UTR CCA 90 bp ACAAGAGTCCATAGTCCTTCCCAGGACCTGGTCGCGGCTCATCTCCCAGGAAGCGTCCTTCCCAGGACCTaGTCGCGGCTCATCTCCCAG +
Preference number: 4 (lower is better)
Translates to: TRVHSPSQDLVAAHLPGSVLPRT*SRLISQ
Trigger: CTGGGAGATGAGCCGCGACCAGGTCCTGGGAAGGAC...GCTTCCTGGGAGATGAGCCGCGACCAGGTCCTGGGAAGGACTATGGACTCTTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324689.8
ENST00000443677.6
ENST00000535306.6
CDS-3UTR GCA 90 bp CCCAGGAGCCAGGCAGGGGCCTATTCTTTATTTGGAATGTCCAGGGTTCAAACAGTGTTCTTCCGCAGGTaGGGCTGCTGCGCGGCGCCC +
Preference number: 4 (lower is better)
Translates to: PRSQAGAYSLFGMSRVQTVFFRR*GCCAAP
Trigger: GGGCGCCGCGCAGCAGCCGCACCTGCGGAAGAACAC...TGTTTGAACCCTGGACATTCCAAATAAAGAATAGGCCCCTGCCTGGCTCCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324689.8
ENST00000328381.10
ENST00000535306.6
CDS-3UTR GCA 90 bp CCCAGGAGCCAGGCAGGGGCCTATTCTTTATTTGGAATGTCCAGGGTTCAAACATCTACTGCCACCCGCTaGAGTTCCGGGCGGCGCCGG +
Preference number: 4 (lower is better)
Translates to: PRSQAGAYSLFGMSRVQTSTATR*SSGRRR
Trigger: CCGGCGCCGCCCGGAACTGCAGCGGGTGGCAGTAGA...TGTTTGAACCCTGGACATTCCAAATAAAGAATAGGCCCCTGCCTGGCTCCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324689.8
ENST00000328381.10
ENST00000535306.6
CDS-3UTR GCA 90 bp GGCAGGGTACAAAGGAGAGGAGGCAGAGATGGTACACTCATACAGAAGCTTCTCTCTACTGCCACCCGCTaGAGTTCCGGGCGGCGCCGG +
Preference number: 4 (lower is better)
Translates to: GRVQRRGGRDGTLIQKLLSTATR*SSGRRR
Trigger: CCGGCGCCGCCCGGAACTGCAGCGGGTGGCAGTAGA...GAGAAGCTTCTGTATGAGTGTACCATCTCTGCCTCCTCTCCTTTGTACCCTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324689.8
ENST00000535306.6
CDS-3UTR CCA 90 bp CAGGGTACAAAGGAGAGGAGGCAGAGATGGTACACTCATACAGAAGCTTCTCCTGCCTCGCGGCCGCGCTaGAGAGGGAACTGGAGCCCG +
Preference number: 4 (lower is better)
Translates to: QGTKERRQRWYTHTEASPASRPR*RGNWSP
Trigger: CGGGCTCCAGTTCCCTCTCCAGCGCGGCCGCGAGGC...AGGAGAAGCTTCTGTATGAGTGTACCATCTCTGCCTCCTCTCCTTTGTACCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324689.8
ENST00000443677.6
ENST00000535306.6
CDS-3UTR CCA 90 bp GACACAGTCACTGTACGGGAATCCTTGGACACCTCCAGGCTGCAGGAAAGGCTCGTCCTTCCCAGGACCTaGTCGCGGCTCATCTCCCAG +
Preference number: 4 (lower is better)
Translates to: DTVTVRESLDTSRLQERLVLPRT*SRLISQ
Trigger: CTGGGAGATGAGCCGCGACCAGGTCCTGGGAAGGAC...GAGCCTTTCCTGCAGCCTGGAGGTGTCCAAGGATTCCCGTACAGTGACTGTGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324689.8
ENST00000443677.6
ENST00000535306.6
CDS-3UTR CCA 90 bp AGTCAAGTTACTACCCTGATTGATGACAGGGAGAGAGACCAGGAAACCACTGTGGCCTCGCGGCCGCGCTaGAGAGGGAACTGGAGCCCG +
Preference number: 4 (lower is better)
Translates to: SQVTTLIDDRERDQETTVASRPR*RGNWSP
Trigger: CGGGCTCCAGTTCCCTCTCCAGCGCGGCCGCGAGGC...CACAGTGGTTTCCTGGTCTCTCTCCCTGTCATCAATCAGGGTAGTAACTTGACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324689.8
ENST00000328381.10
ENST00000443677.6
ENST00000535306.6
CDS-3UTR TCA 90 bp CCCAGGAGCCAGGCAGGGGCCTATTCTTTATTTGGAATGTCCAGGGTTCAAACAGCAGCCCCTGGCAGATaGTGCAGCCGAGGTCGTCCT +
Preference number: 4 (lower is better)
Translates to: PRSQAGAYSLFGMSRVQTAAPGR*CSRGRP
Trigger: AGGACGACCTCGGCTGCATCATCTGCCAGGGGCTGC...TGTTTGAACCCTGGACATTCCAAATAAAGAATAGGCCCCTGCCTGGCTCCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324689.8
ENST00000328381.10
ENST00000535306.6
CDS-3UTR TCA 90 bp GACACAGTCACTGTACGGGAATCCTTGGACACCTCCAGGCTGCAGGAAAGGCTCGGTGGGAGGACTGCTTaGGACCAGGAATTCGACACC +
Preference number: 4 (lower is better)
Translates to: DTVTVRESLDTSRLQERLGGRTA*DQEFDT
Trigger: GGTGTCGAATTCCTGGTCTCAAGCAGTCCTCCCACC...GAGCCTTTCCTGCAGCCTGGAGGTGTCCAAGGATTCCCGTACAGTGACTGTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324689.8
ENST00000443677.6
ENST00000535306.6
CDS-3UTR TCA 90 bp CAGGGTACAAAGGAGAGGAGGCAGAGATGGTACACTCATACAGAAGCTTCTCCTGCAGCCCCTGGCAGATaGTGCAGCCGAGGTCGTCCT +
Preference number: 4 (lower is better)
Translates to: QGTKERRQRWYTHTEASPAAPGR*CSRGRP
Trigger: AGGACGACCTCGGCTGCATCATCTGCCAGGGGCTGC...AGGAGAAGCTTCTGTATGAGTGTACCATCTCTGCCTCCTCTCCTTTGTACCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324689.8
ENST00000443677.6
ENST00000535306.6
CDS-3UTR GCA 90 bp TCTCCTGGCAGAGTCTTCAGGATAATGCTTAATTCTCCCAGCAATGATGTGTGGGTGTTCTTCCGCAGGTaGGGCTGCTGCGCGGCGCCC +
Preference number: 4 (lower is better)
Translates to: SPGRVFRIMLNSPSNDVWVFFRR*GCCAAP
Trigger: GGGCGCCGCGCAGCAGCCGCACCTGCGGAAGAACAC...CCACACATCATTGCTGGGAGAATTAAGCATTATCCTGAAGACTCTGCCAGGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324689.8
ENST00000328381.10
ENST00000535306.6
CDS-3UTR GCA 90 bp AAGGCAGGGTACAAAGGAGAGGAGGCAGAGATGGTACACTCATACAGAAGCTTCCGCCTGTATCTCGCGTaGGGCGCGGCGGTACTTGTC +
Preference number: 4 (lower is better)
Translates to: KAGYKGEEAEMVHSYRSFRLYLA*GAAVLV
Trigger: GACAAGTACCGCCGCGCCGCACGCGAGATACAGGCG...GAAGCTTCTGTATGAGTGTACCATCTCTGCCTCCTCTCCTTTGTACCCTGCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324689.8
ENST00000443677.6
ENST00000535306.6
CDS-3UTR GCA 90 bp AGGAGGCAGAGATGGTACACTCATACAGAAGCTTCTCCTGATTGTCCACTGAATTCTACTGCCACCCGCTaGAGTTCCGGGCGGCGCCGG +
Preference number: 4 (lower is better)
Translates to: RRQRWYTHTEASPDCPLNSTATR*SSGRRR
Trigger: CCGGCGCCGCCCGGAACTGCAGCGGGTGGCAGTAGA...ATTCAGTGGACAATCAGGAGAAGCTTCTGTATGAGTGTACCATCTCTGCCTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324689.8
ENST00000535306.6
CDS-3UTR GCA 90 bp GATAGGGTTGTGGGCGGTGAGACACAGTCACTGTACGGGAATCCTTGGACACCTAGAAGCTCTCCTGAGTaGAGGGTGGCTCTGGTCAGG +
Preference number: 4 (lower is better)
Translates to: DRVVGGETQSLYGNPWTPRSSPE*RVALVR
Trigger: CCTGACCAGAGCCACCCTGCACTCAGGAGAGCTTCT...AGGTGTCCAAGGATTCCCGTACAGTGACTGTGTCTCACCGCCCACAACCCTATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324689.8
ENST00000443677.6
ENST00000535306.6
CDS-3UTR GCA 90 bp GATAGGGTTGTGGGCGGTGAGACACAGTCACTGTACGGGAATCCTTGGACACCTCAAGGTTCAGCCAGATaGCCACCACCCCAGGTCTGT +
Preference number: 4 (lower is better)
Translates to: DRVVGGETQSLYGNPWTPQGSAR*PPPQVC
Trigger: ACAGACCTGGGGTGGTGGGCATCTGGCTGAACCTTG...AGGTGTCCAAGGATTCCCGTACAGTGACTGTGTCTCACCGCCCACAACCCTATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324689.8
ENST00000443677.6
ENST00000535306.6
CDS-3UTR CCA 90 bp ATAGGGTTGTGGGCGGTGAGACACAGTCACTGTACGGGAATCCTTGGACACCTCAGTGCAGGGTGGCTCTaGTCAGGCAATGGGCATGAG +
Preference number: 4 (lower is better)
Translates to: IGLWAVRHSHCTGILGHLSAGWL*SGNGHE
Trigger: CTCATGCCCATTGCCTGACCAGAGCCACCCTGCACT...GAGGTGTCCAAGGATTCCCGTACAGTGACTGTGTCTCACCGCCCACAACCCTAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324689.8
ENST00000443677.6
ENST00000535306.6
CDS-3UTR CCA 90 bp ATAGGGTTGTGGGCGGTGAGACACAGTCACTGTACGGGAATCCTTGGACACCTCCCAGCGATAGGGTTGTaGGCGGTGAGACACAGTCAC +
Preference number: 4 (lower is better)
Translates to: IGLWAVRHSHCTGILGHLPAIGL*AVRHSH
Trigger: GTGACTGTGTCTCACCGCCCACAACCCTATCGCTGG...GAGGTGTCCAAGGATTCCCGTACAGTGACTGTGTCTCACCGCCCACAACCCTAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324689.8
ENST00000443677.6
ENST00000535306.6
CDS-3UTR TCA 90 bp GACAGTTTCCTTGACCATGTGCCATGCAGAGAGCTGGCTAGTCCCCTTCCATTCGGATGGATGGCCCACTaGGCAAACCGAGAAGCTCTC +
Preference number: 4 (lower is better)
Translates to: DSFLDHVPCRELASPLPFGWMAH*ANREAL
Trigger: GAGAGCTTCTCGGTTTGCTCAGTGGGCCATCCATCC...GAATGGAAGGGGACTAGCCAGCTCTCTGCATGGCACATGGTCAAGGAAACTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324689.8
ENST00000443677.6
ENST00000535306.6
CDS-3UTR GCA 90 bp TATCAGGCAAGATATTCTAATGGCTTAGAGGTTATCTCCCAGGAGCCAGGCAGGCGCCTGTATCTCGCGTaGGGCGCGGCGGTACTTGTC +
Preference number: 4 (lower is better)
Translates to: YQARYSNGLEVISQEPGRRLYLA*GAAVLV
Trigger: GACAAGTACCGCCGCGCCGCACGCGAGATACAGGCG...CCTGCCTGGCTCCTGGGAGATAACCTCTAAGCCATTAGAATATCTTGCCTGATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324689.8
ENST00000328381.10
ENST00000535306.6
CDS-3UTR GCA 90 bp CCCAACTGCCCAGTGGCTGCAATTCCTAGTGTCCACTTCCCAGTAATGCTTTCCGGAAGCCACCCCAACTaGCCAGTGGCTGCAATTCCT +
Preference number: 4 (lower is better)
Translates to: PNCPVAAIPSVHFPVMLSGSHPN*PVAAIP
Trigger: AGGAATTGCAGCCACTGGGCAGTTGGGGTGGCTTCC...GGAAAGCATTACTGGGAAGTGGACACTAGGAATTGCAGCCACTGGGCAGTTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324689.8
ENST00000443677.6
ENST00000535306.6
CDS-3UTR CCA 90 bp TTGATGACAGGGAGAGAGACCAGGAAACCACTGTGTTGTAATCCCTTAGGAAACAGGGCCTCCAGGCAGTaGCGGCAGAAGCTGTGGCCG +
Preference number: 4 (lower is better)
Translates to: LMTGRETRKPLCCNPLGNRASRQ*RQKLWP
Trigger: CGGCCACAGCTTCTGCCGCCACTGCCTGGAGGCCCT...GTTTCCTAAGGGATTACAACACAGTGGTTTCCTGGTCTCTCTCCCTGTCATCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324689.8
ENST00000328381.10
ENST00000443677.6
ENST00000535306.6
3UTR CAA 72 bp GCTGGTAGAAAACCTCTCACAGCTCCAGCGATAGGGTaGTGGGCGGTGAGACACAGTCACTGTACGGGAATC +
Preference number: 4 (lower is better)
Translates to: AGRKPLTAPAIG*WAVRHSHCTGI
Trigger: GATTCCCGTACAGTGACTGTGTCTCACCGCCCACAACCCTATCGCTGGAGCTGTGAGAGGTTTTCTACCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324689.8
ENST00000443677.6
ENST00000535306.6
CDS-3UTR TCA 90 bp TCTCCTGGCAGAGTCTTCAGGATAATGCTTAATTCTCCCAGCAATGATGTGTGGGCAGCCCCTGGCAGATaGTGCAGCCGAGGTCGTCCT +
Preference number: 4 (lower is better)
Translates to: SPGRVFRIMLNSPSNDVWAAPGR*CSRGRP
Trigger: AGGACGACCTCGGCTGCATCATCTGCCAGGGGCTGC...CCACACATCATTGCTGGGAGAATTAAGCATTATCCTGAAGACTCTGCCAGGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324689.8
ENST00000328381.10
ENST00000535306.6
CDS-3UTR TCA 90 bp ACAGGGAGAGAGACCAGGAAACCACTGTGTTGTAATCCCTTAGGAAACCTTACAGCAGCCCCTGGCAGATaGTGCAGCCGAGGTCGTCCT +
Preference number: 4 (lower is better)
Translates to: TGRETRKPLCCNPLGNLTAAPGR*CSRGRP
Trigger: AGGACGACCTCGGCTGCATCATCTGCCAGGGGCTGC...TGTAAGGTTTCCTAAGGGATTACAACACAGTGGTTTCCTGGTCTCTCTCCCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324689.8
ENST00000443677.6
ENST00000535306.6
CDS-3UTR TCA 90 bp CAGGGTACAAAGGAGAGGAGGCAGAGATGGTACACTCATACAGAAGCTTCTCCTACCGAGAAGCTCTCCTaGGTGCAGGGTGGCTCTGGT +
Preference number: 4 (lower is better)
Translates to: QGTKERRQRWYTHTEASPTEKLS*VQGGSG
Trigger: ACCAGAGCCACCCTGCACTCAGGAGAGCTTCTCGGT...AGGAGAAGCTTCTGTATGAGTGTACCATCTCTGCCTCCTCTCCTTTGTACCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324689.8
ENST00000443677.6
ENST00000535306.6
CDS-3UTR TCA 90 bp GACACAGTCACTGTACGGGAATCCTTGGACACCTCCAGGCTGCAGGAAAGGCTCCAAGGACAGTTTCCTTaGCCATGTGCCATGCAGAGA +
Preference number: 4 (lower is better)
Translates to: DTVTVRESLDTSRLQERLQGQFP*PCAMQR
Trigger: TCTCTGCATGGCACATGGTCAAGGAAACTGTCCTTG...GAGCCTTTCCTGCAGCCTGGAGGTGTCCAAGGATTCCCGTACAGTGACTGTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324689.8
ENST00000443677.6
ENST00000535306.6
CDS-3UTR TCA 90 bp GAGTCCATAGTCCTTCCCAGGACCTGGTCGCGGCTCATCTCCCAGGAAGCCACCGATGTGTGGCTACAATaGTGTGTGCACAGAGTATTA +
Preference number: 4 (lower is better)
Translates to: ESIVLPRTWSRLISQEATDVWLQ*CVHRVL
Trigger: TAATACTCTGTGCACACATCATTGTAGCCACACATC...GGTGGCTTCCTGGGAGATGAGCCGCGACCAGGTCCTGGGAAGGACTATGGACTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324689.8
ENST00000535306.6
CDS-3UTR GCA 90 bp TCTCCTGGCAGAGTCTTCAGGATAATGCTTAATTCTCCCAGCAATGATGTGTGGCGCCTGTATCTCGCGTaGGGCGCGGCGGTACTTGTC +
Preference number: 4 (lower is better)
Translates to: SPGRVFRIMLNSPSNDVWRLYLA*GAAVLV
Trigger: GACAAGTACCGCCGCGCCGCACGCGAGATACAGGCG...CCACACATCATTGCTGGGAGAATTAAGCATTATCCTGAAGACTCTGCCAGGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324689.8
ENST00000328381.10
ENST00000535306.6
CDS-3UTR GCA 90 bp CCCAGGAGCCAGGCAGGGGCCTATTCTTTATTTGGAATGTCCAGGGTTCAAACAAGAAGCTCTCCTGAGTaGAGGGTGGCTCTGGTCAGG +
Preference number: 4 (lower is better)
Translates to: PRSQAGAYSLFGMSRVQTRSSPE*RVALVR
Trigger: CCTGACCAGAGCCACCCTGCACTCAGGAGAGCTTCT...TGTTTGAACCCTGGACATTCCAAATAAAGAATAGGCCCCTGCCTGGCTCCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324689.8
ENST00000328381.10
ENST00000535306.6
CDS-3UTR GCA 90 bp GGCAGGGTACAAAGGAGAGGAGGCAGAGATGGTACACTCATACAGAAGCTTCTCGGAAGCCACCCCAACTaGCCAGTGGCTGCAATTCCT +
Preference number: 4 (lower is better)
Translates to: GRVQRRGGRDGTLIQKLLGSHPN*PVAAIP
Trigger: AGGAATTGCAGCCACTGGGCAGTTGGGGTGGCTTCC...GAGAAGCTTCTGTATGAGTGTACCATCTCTGCCTCCTCTCCTTTGTACCCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324689.8
ENST00000443677.6
ENST00000535306.6
CDS-3UTR GCA 90 bp TTGTGGGCGGTGAGACACAGTCACTGTACGGGAATCCTTGGACACCTCCAGGCTGTTTCCTTGACCATGTaGCATGCAGAGAGCTGGCTA +
Preference number: 4 (lower is better)
Translates to: LWAVRHSHCTGILGHLQAVSLTM*HAESWL
Trigger: TAGCCAGCTCTCTGCATGGCACATGGTCAAGGAAAC...AGCCTGGAGGTGTCCAAGGATTCCCGTACAGTGACTGTGTCTCACCGCCCACAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324689.8
ENST00000443677.6
ENST00000535306.6
CDS-3UTR GCA 90 bp CCCAGGAGCCAGGCAGGGGCCTATTCTTTATTTGGAATGTCCAGGGTTCAAACACAAGGTTCAGCCAGATaGCCACCACCCCAGGTCTGT +
Preference number: 4 (lower is better)
Translates to: PRSQAGAYSLFGMSRVQTQGSAR*PPPQVC
Trigger: ACAGACCTGGGGTGGTGGGCATCTGGCTGAACCTTG...TGTTTGAACCCTGGACATTCCAAATAAAGAATAGGCCCCTGCCTGGCTCCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324689.8
ENST00000328381.10
ENST00000535306.6
CDS-3UTR GCA 90 bp AGAGAGACCAGGAAACCACTGTGTTGTAATCCCTTAGGAAACCTTACACCTTTACAGGAGTTCTCCCGCTaGAGTTCCGGGCGGCGCCGG +
Preference number: 4 (lower is better)
Translates to: RETRKPLCCNPLGNLTPLQEFSR*SSGRRR
Trigger: CCGGCGCCGCCCGGAACTGCAGCGGGAGAACTCCTG...TAAAGGTGTAAGGTTTCCTAAGGGATTACAACACAGTGGTTTCCTGGTCTCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443677.6
CDS-3UTR CCA 90 bp TGTCCAGGGCTTTTACTAGGGATTGATCACATTGGCATGCTTCACTGCCCACATCAGTCCAGCAGCCCCTaGCAGATGATGCAGCCGAGG +
Preference number: 4 (lower is better)
Translates to: CPGLLLGIDHIGMLHCPHQSSSP*QMMQPR
Trigger: CCTCGGCTGCATCATCTGCCAGGGGCTGCTGGACTG...ATGTGGGCAGTGAAGCATGCCAATGTGATCAATCCCTAGTAAAAGCCCTGGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324689.8
ENST00000328381.10
ENST00000535306.6
CDS-3UTR CCA 90 bp CAAGAGAACTTCCAATTATCCTCTCCTGGCAGAGTCTTCAGGATAATGCTTAATGCCTCGCGGCCGCGCTaGAGAGGGAACTGGAGCCCG +
Preference number: 4 (lower is better)
Translates to: QENFQLSSPGRVFRIMLNASRPR*RGNWSP
Trigger: CGGGCTCCAGTTCCCTCTCCAGCGCGGCCGCGAGGC...ATTAAGCATTATCCTGAAGACTCTGCCAGGAGAGGATAATTGGAAGTTCTCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324689.8
ENST00000328381.10
ENST00000535306.6
CDS-3UTR CCA 90 bp TTTCCAGGATGTAAGCCATACAGCCAGAAGGCAGGGTACAAAGGAGAGGAGGCACCAGCGATAGGGTTGTaGGCGGTGAGACACAGTCAC +
Preference number: 4 (lower is better)
Translates to: FPGCKPYSQKAGYKGEEAPAIGL*AVRHSH
Trigger: GTGACTGTGTCTCACCGCCCACAACCCTATCGCTGG...TGCCTCCTCTCCTTTGTACCCTGCCTTCTGGCTGTATGGCTTACATCCTGGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324689.8
ENST00000443677.6
ENST00000535306.6
CDS-3UTR CCA 90 bp TTGTGGGCGGTGAGACACAGTCACTGTACGGGAATCCTTGGACACCTCCAGGCTCAAAAGTGGTATTCTTaGCCAGGTGTGGTGGCTCAC +
Preference number: 4 (lower is better)
Translates to: LWAVRHSHCTGILGHLQAQKWYS*PGVVAH
Trigger: GTGAGCCACCACACCTGGCCAAGAATACCACTTTTG...AGCCTGGAGGTGTCCAAGGATTCCCGTACAGTGACTGTGTCTCACCGCCCACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324689.8
ENST00000535306.6
CDS-3UTR TCA 90 bp TATCAGGCAAGATATTCTAATGGCTTAGAGGTTATCTCCCAGGAGCCAGGCAGGACCGAGAAGCTCTCCTaGGTGCAGGGTGGCTCTGGT +
Preference number: 4 (lower is better)
Translates to: YQARYSNGLEVISQEPGRTEKLS*VQGGSG
Trigger: ACCAGAGCCACCCTGCACTCAGGAGAGCTTCTCGGT...CCTGCCTGGCTCCTGGGAGATAACCTCTAAGCCATTAGAATATCTTGCCTGATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324689.8
ENST00000328381.10
ENST00000535306.6
CDS-3UTR TCA 90 bp AGTCAAGTTACTACCCTGATTGATGACAGGGAGAGAGACCAGGAAACCACTGTGACCGAGAAGCTCTCCTaGGTGCAGGGTGGCTCTGGT +
Preference number: 4 (lower is better)
Translates to: SQVTTLIDDRERDQETTVTEKLS*VQGGSG
Trigger: ACCAGAGCCACCCTGCACTCAGGAGAGCTTCTCGGT...CACAGTGGTTTCCTGGTCTCTCTCCCTGTCATCAATCAGGGTAGTAACTTGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324689.8
ENST00000328381.10
ENST00000443677.6
ENST00000535306.6
CDS-3UTR TCA 90 bp CAGGGTACAAAGGAGAGGAGGCAGAGATGGTACACTCATACAGAAGCTTCTCCTGGATGGATGGCCCACTaGGCAAACCGAGAAGCTCTC +
Preference number: 4 (lower is better)
Translates to: QGTKERRQRWYTHTEASPGWMAH*ANREAL
Trigger: GAGAGCTTCTCGGTTTGCTCAGTGGGCCATCCATCC...AGGAGAAGCTTCTGTATGAGTGTACCATCTCTGCCTCCTCTCCTTTGTACCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324689.8
ENST00000443677.6
ENST00000535306.6
CDS-3UTR TCA 90 bp AATGGCTTAGAGGTTATCTCCCAGGAGCCAGGCAGGGGCCTATTCTTTATTTGGGGATGGATGGCCCACTaGGCAAACCGAGAAGCTCTC +
Preference number: 4 (lower is better)
Translates to: NGLEVISQEPGRGLFFIWGWMAH*ANREAL
Trigger: GAGAGCTTCTCGGTTTGCTCAGTGGGCCATCCATCC...CCAAATAAAGAATAGGCCCCTGCCTGGCTCCTGGGAGATAACCTCTAAGCCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324689.8
ENST00000328381.10
ENST00000535306.6
CDS-3UTR TCA 90 bp GACACAGTCACTGTACGGGAATCCTTGGACACCTCCAGGCTGCAGGAAAGGCTCGTCAAGTTACTACCCTaGTTGATGACAGGGAGAGAG +
Preference number: 4 (lower is better)
Translates to: DTVTVRESLDTSRLQERLVKLLP*LMTGRE
Trigger: CTCTCTCCCTGTCATCAATCAGGGTAGTAACTTGAC...GAGCCTTTCCTGCAGCCTGGAGGTGTCCAAGGATTCCCGTACAGTGACTGTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324689.8
ENST00000443677.6
ENST00000535306.6
CDS-3UTR TCA 90 bp CCTAGGTGTCCAGGGCTTTTACTAGGGATTGATCACATTGGCATGCTTCACTGCGGTGGGAGGACTGCTTaGGACCAGGAATTCGACACC +
Preference number: 4 (lower is better)
Translates to: PRCPGLLLGIDHIGMLHCGGRTA*DQEFDT
Trigger: GGTGTCGAATTCCTGGTCTCAAGCAGTCCTCCCACC...GCAGTGAAGCATGCCAATGTGATCAATCCCTAGTAAAAGCCCTGGACACCTAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324689.8
ENST00000328381.10
ENST00000535306.6
CDS-3UTR GCA 90 bp CAGAGATGGTACACTCATACAGAAGCTTCTCCTGATTGTCCACTGAATAGAAGGCGCCTGTATCTCGCGTaGGGCGCGGCGGTACTTGTC +
Preference number: 4 (lower is better)
Translates to: QRWYTHTEASPDCPLNRRRLYLA*GAAVLV
Trigger: GACAAGTACCGCCGCGCCGCACGCGAGATACAGGCG...CCTTCTATTCAGTGGACAATCAGGAGAAGCTTCTGTATGAGTGTACCATCTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324689.8
ENST00000443677.6
ENST00000535306.6
CDS-3UTR GCA 90 bp CCTAGGTGTCCAGGGCTTTTACTAGGGATTGATCACATTGGCATGCTTCACTGCAGAAGCTCTCCTGAGTaGAGGGTGGCTCTGGTCAGG +
Preference number: 4 (lower is better)
Translates to: PRCPGLLLGIDHIGMLHCRSSPE*RVALVR
Trigger: CCTGACCAGAGCCACCCTGCACTCAGGAGAGCTTCT...GCAGTGAAGCATGCCAATGTGATCAATCCCTAGTAAAAGCCCTGGACACCTAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324689.8
ENST00000328381.10
ENST00000535306.6
CDS-3UTR GCA 90 bp AAGGCAGGGTACAAAGGAGAGGAGGCAGAGATGGTACACTCATACAGAAGCTTCAGAAGCTCTCCTGAGTaGAGGGTGGCTCTGGTCAGG +
Preference number: 4 (lower is better)
Translates to: KAGYKGEEAEMVHSYRSFRSSPE*RVALVR
Trigger: CCTGACCAGAGCCACCCTGCACTCAGGAGAGCTTCT...GAAGCTTCTGTATGAGTGTACCATCTCTGCCTCCTCTCCTTTGTACCCTGCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324689.8
ENST00000443677.6
ENST00000535306.6
CDS-3UTR GCA 90 bp CAGGGTACAAAGGAGAGGAGGCAGAGATGGTACACTCATACAGAAGCTTCTCCTGGAAGCCACCCCAACTaGCCAGTGGCTGCAATTCCT +
Preference number: 4 (lower is better)
Translates to: QGTKERRQRWYTHTEASPGSHPN*PVAAIP
Trigger: AGGAATTGCAGCCACTGGGCAGTTGGGGTGGCTTCC...AGGAGAAGCTTCTGTATGAGTGTACCATCTCTGCCTCCTCTCCTTTGTACCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324689.8
ENST00000443677.6
ENST00000535306.6
CDS-3UTR GCA 90 bp CCTAGGTGTCCAGGGCTTTTACTAGGGATTGATCACATTGGCATGCTTCACTGCCAAGGTTCAGCCAGATaGCCACCACCCCAGGTCTGT +
Preference number: 4 (lower is better)
Translates to: PRCPGLLLGIDHIGMLHCQGSAR*PPPQVC
Trigger: ACAGACCTGGGGTGGTGGGCATCTGGCTGAACCTTG...GCAGTGAAGCATGCCAATGTGATCAATCCCTAGTAAAAGCCCTGGACACCTAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324689.8
ENST00000328381.10
ENST00000535306.6
CDS-3UTR CCA 90 bp TCCTCTCCTGGCAGAGTCTTCAGGATAATGCTTAATTCTCCCAGCAATGATGTGCAGTCCAGCAGCCCCTaGCAGATGATGCAGCCGAGG +
Preference number: 4 (lower is better)
Translates to: SSPGRVFRIMLNSPSNDVQSSSP*QMMQPR
Trigger: CCTCGGCTGCATCATCTGCCAGGGGCTGCTGGACTG...CACATCATTGCTGGGAGAATTAAGCATTATCCTGAAGACTCTGCCAGGAGAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324689.8
ENST00000328381.10
ENST00000535306.6
CDS-3UTR CCA 90 bp TTGATGACAGGGAGAGAGACCAGGAAACCACTGTGTTGTAATCCCTTAGGAAACCAGTCCAGCAGCCCCTaGCAGATGATGCAGCCGAGG +
Preference number: 4 (lower is better)
Translates to: LMTGRETRKPLCCNPLGNQSSSP*QMMQPR
Trigger: CCTCGGCTGCATCATCTGCCAGGGGCTGCTGGACTG...GTTTCCTAAGGGATTACAACACAGTGGTTTCCTGGTCTCTCTCCCTGTCATCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324689.8
ENST00000328381.10
ENST00000443677.6
ENST00000535306.6
CDS-3UTR CCA 90 bp CAGGGTACAAAGGAGAGGAGGCAGAGATGGTACACTCATACAGAAGCTTCTCCTCCAGCGATAGGGTTGTaGGCGGTGAGACACAGTCAC +
Preference number: 4 (lower is better)
Translates to: QGTKERRQRWYTHTEASPPAIGL*AVRHSH
Trigger: GTGACTGTGTCTCACCGCCCACAACCCTATCGCTGG...AGGAGAAGCTTCTGTATGAGTGTACCATCTCTGCCTCCTCTCCTTTGTACCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324689.8
ENST00000443677.6
ENST00000535306.6
CDS-3UTR CCA 90 bp ACAGGGAGAGAGACCAGGAAACCACTGTGTTGTAATCCCTTAGGAAACCTTACAGTCCTTCCCAGGACCTaGTCGCGGCTCATCTCCCAG +
Preference number: 4 (lower is better)
Translates to: TGRETRKPLCCNPLGNLTVLPRT*SRLISQ
Trigger: CTGGGAGATGAGCCGCGACCAGGTCCTGGGAAGGAC...TGTAAGGTTTCCTAAGGGATTACAACACAGTGGTTTCCTGGTCTCTCTCCCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324689.8
ENST00000443677.6
ENST00000535306.6
CDS-3UTR CCA 90 bp GAGTCCATAGTCCTTCCCAGGACCTGGTCGCGGCTCATCTCCCAGGAAGCCACCGGCCTATTCTTTATTTaGAATGTCCAGGGTTCAAAC +
Preference number: 4 (lower is better)
Translates to: ESIVLPRTWSRLISQEATGLFFI*NVQGSN
Trigger: GTTTGAACCCTGGACATTCCAAATAAAGAATAGGCC...GGTGGCTTCCTGGGAGATGAGCCGCGACCAGGTCCTGGGAAGGACTATGGACTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324689.8
ENST00000535306.6
CDS-3UTR CCA 90 bp GACACAGTCACTGTACGGGAATCCTTGGACACCTCCAGGCTGCAGGAAAGGCTCGGAAGTCACCAGCTTTaGAGAAGCCATGGAAAGATC +
Preference number: 4 (lower is better)
Translates to: DTVTVRESLDTSRLQERLGSHQL*RSHGKI
Trigger: GATCTTTCCATGGCTTCTCCAAAGCTGGTGACTTCC...GAGCCTTTCCTGCAGCCTGGAGGTGTCCAAGGATTCCCGTACAGTGACTGTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535306.6
CDS-3UTR TCA 90 bp TCTCCTGGCAGAGTCTTCAGGATAATGCTTAATTCTCCCAGCAATGATGTGTGGACCGAGAAGCTCTCCTaGGTGCAGGGTGGCTCTGGT +
Preference number: 4 (lower is better)
Translates to: SPGRVFRIMLNSPSNDVWTEKLS*VQGGSG
Trigger: ACCAGAGCCACCCTGCACTCAGGAGAGCTTCTCGGT...CCACACATCATTGCTGGGAGAATTAAGCATTATCCTGAAGACTCTGCCAGGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324689.8
ENST00000328381.10
ENST00000535306.6
CDS-3UTR GCA 90 bp GTTCATCCTGTATCACACAAAAGGATTAACTTCAAAAGTGGTATTCTTGGCCAGGTGTTCTTCCGCAGGTaGGGCTGCTGCGCGGCGCCC +
Preference number: 4 (lower is better)
Translates to: VHPVSHKRINFKSGILGQVFFRR*GCCAAP
Trigger: GGGCGCCGCGCAGCAGCCGCACCTGCGGAAGAACAC...CTGGCCAAGAATACCACTTTTGAAGTTAATCCTTTTGTGTGATACAGGATGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324689.8
ENST00000328381.10
ENST00000535306.6
CDS-3UTR CCA 90 bp CAAGAGAACTTCCAATTATCCTCTCCTGGCAGAGTCTTCAGGATAATGCTTAATAGGGCCTCCAGGCAGTaGCGGCAGAAGCTGTGGCCG +
Preference number: 4 (lower is better)
Translates to: QENFQLSSPGRVFRIMLNRASRQ*RQKLWP
Trigger: CGGCCACAGCTTCTGCCGCCACTGCCTGGAGGCCCT...ATTAAGCATTATCCTGAAGACTCTGCCAGGAGAGGATAATTGGAAGTTCTCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324689.8
ENST00000328381.10
ENST00000535306.6
CDS-3UTR CCA 90 bp TATCAGGCAAGATATTCTAATGGCTTAGAGGTTATCTCCCAGGAGCCAGGCAGGAGTGCAGGGTGGCTCTaGTCAGGCAATGGGCATGAG +
Preference number: 4 (lower is better)
Translates to: YQARYSNGLEVISQEPGRSAGWL*SGNGHE
Trigger: CTCATGCCCATTGCCTGACCAGAGCCACCCTGCACT...CCTGCCTGGCTCCTGGGAGATAACCTCTAAGCCATTAGAATATCTTGCCTGATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324689.8
ENST00000328381.10
ENST00000535306.6
CDS-3UTR CCA 90 bp AGTCAAGTTACTACCCTGATTGATGACAGGGAGAGAGACCAGGAAACCACTGTGCTGTACGGGAATCCTTaGACACCTCCAGGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: SQVTTLIDDRERDQETTVLYGNP*TPPGCR
Trigger: CCTGCAGCCTGGAGGTGTCCAAGGATTCCCGTACAG...CACAGTGGTTTCCTGGTCTCTCTCCCTGTCATCAATCAGGGTAGTAACTTGACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324689.8
ENST00000328381.10
ENST00000443677.6
ENST00000535306.6
CDS-3UTR CCA 90 bp AAGGAGAGGAGGCAGAGATGGTACACTCATACAGAAGCTTCTCCTGATTGTCCACTGTACGGGAATCCTTaGACACCTCCAGGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: KERRQRWYTHTEASPDCPLYGNP*TPPGCR
Trigger: CCTGCAGCCTGGAGGTGTCCAAGGATTCCCGTACAG...TGGACAATCAGGAGAAGCTTCTGTATGAGTGTACCATCTCTGCCTCCTCTCCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324689.8
ENST00000443677.6
ENST00000535306.6
CDS-3UTR CCA 90 bp AATGGCTTAGAGGTTATCTCCCAGGAGCCAGGCAGGGGCCTATTCTTTATTTGGACCCCAACTGCCCAGTaGCTGCAATTCCTAGTGTCC +
Preference number: 4 (lower is better)
Translates to: NGLEVISQEPGRGLFFIWTPTAQ*LQFLVS
Trigger: GGACACTAGGAATTGCAGCCACTGGGCAGTTGGGGT...CCAAATAAAGAATAGGCCCCTGCCTGGCTCCTGGGAGATAACCTCTAAGCCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324689.8
ENST00000328381.10
ENST00000535306.6
CDS-3UTR CCA 90 bp CAGGGTACAAAGGAGAGGAGGCAGAGATGGTACACTCATACAGAAGCTTCTCCTACCCCAACTGCCCAGTaGCTGCAATTCCTAGTGTCC +
Preference number: 4 (lower is better)
Translates to: QGTKERRQRWYTHTEASPTPTAQ*LQFLVS
Trigger: GGACACTAGGAATTGCAGCCACTGGGCAGTTGGGGT...AGGAGAAGCTTCTGTATGAGTGTACCATCTCTGCCTCCTCTCCTTTGTACCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324689.8
ENST00000443677.6
ENST00000535306.6
CDS-3UTR TCA 90 bp AAGGCAGGGTACAAAGGAGAGGAGGCAGAGATGGTACACTCATACAGAAGCTTCTCTGATAGGGGCCTCTaGTTCTGCAGGCTTCTGACA +
Preference number: 4 (lower is better)
Translates to: KAGYKGEEAEMVHSYRSFSDRGL*FCRLLT
Trigger: TGTCAGAAGCCTGCAGAATCAGAGGCCCCTATCAGA...GAAGCTTCTGTATGAGTGTACCATCTCTGCCTCCTCTCCTTTGTACCCTGCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324689.8
ENST00000535306.6
CDS-3UTR TCA 90 bp CCTAGGTGTCCAGGGCTTTTACTAGGGATTGATCACATTGGCATGCTTCACTGCTCTGATAGGGGCCTCTaGTTCTGCAGGCTTCTGACA +
Preference number: 4 (lower is better)
Translates to: PRCPGLLLGIDHIGMLHCSDRGL*FCRLLT
Trigger: TGTCAGAAGCCTGCAGAATCAGAGGCCCCTATCAGA...GCAGTGAAGCATGCCAATGTGATCAATCCCTAGTAAAAGCCCTGGACACCTAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324689.8
ENST00000328381.10
ENST00000535306.6
CDS-3UTR TCA 90 bp CAGGGTACAAAGGAGAGGAGGCAGAGATGGTACACTCATACAGAAGCTTCTCCTTCTGATAGGGGCCTCTaGTTCTGCAGGCTTCTGACA +
Preference number: 4 (lower is better)
Translates to: QGTKERRQRWYTHTEASPSDRGL*FCRLLT
Trigger: TGTCAGAAGCCTGCAGAATCAGAGGCCCCTATCAGA...AGGAGAAGCTTCTGTATGAGTGTACCATCTCTGCCTCCTCTCCTTTGTACCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324689.8
ENST00000535306.6
CDS-3UTR TCA 90 bp GGCAGGGTACAAAGGAGAGGAGGCAGAGATGGTACACTCATACAGAAGCTTCTCCAAGGACAGTTTCCTTaGCCATGTGCCATGCAGAGA +
Preference number: 4 (lower is better)
Translates to: GRVQRRGGRDGTLIQKLLQGQFP*PCAMQR
Trigger: TCTCTGCATGGCACATGGTCAAGGAAACTGTCCTTG...GAGAAGCTTCTGTATGAGTGTACCATCTCTGCCTCCTCTCCTTTGTACCCTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324689.8
ENST00000443677.6
ENST00000535306.6
CDS-3UTR TCA 90 bp CAAGTTACTACCCTGATTGATGACAGGGAGAGAGACCAGGAAACCACTGTGTTGCACCCCAGGTCTGTCTaGGCCAAGGACAGTTTCCTT +
Preference number: 4 (lower is better)
Translates to: QVTTLIDDRERDQETTVLHPRSV*AKDSFL
Trigger: AAGGAAACTGTCCTTGGCTCAGACAGACCTGGGGTG...CAACACAGTGGTTTCCTGGTCTCTCTCCCTGTCATCAATCAGGGTAGTAACTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324689.8
ENST00000328381.10
ENST00000443677.6
ENST00000535306.6
CDS-3UTR TCA 90 bp GACAGTTTCCTTGACCATGTGCCATGCAGAGAGCTGGCTAGTCCCCTTCCATTCCTCCTGATTGTCCACTaGATAGAAGGCAAGCTTTCC +
Preference number: 4 (lower is better)
Translates to: DSFLDHVPCRELASPLPFLLIVH*IEGKLS
Trigger: GGAAAGCTTGCCTTCTATTCAGTGGACAATCAGGAG...GAATGGAAGGGGACTAGCCAGCTCTCTGCATGGCACATGGTCAAGGAAACTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324689.8
ENST00000443677.6
ENST00000535306.6
CDS-3UTR TCA 90 bp GACAGTTTCCTTGACCATGTGCCATGCAGAGAGCTGGCTAGTCCCCTTCCATTCGTCAAGTTACTACCCTaGTTGATGACAGGGAGAGAG +
Preference number: 4 (lower is better)
Translates to: DSFLDHVPCRELASPLPFVKLLP*LMTGRE
Trigger: CTCTCTCCCTGTCATCAATCAGGGTAGTAACTTGAC...GAATGGAAGGGGACTAGCCAGCTCTCTGCATGGCACATGGTCAAGGAAACTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324689.8
ENST00000443677.6
ENST00000535306.6
CDS-3UTR TCA 90 bp GGTAAGGTCCAAGAGAACTTCCAATTATCCTCTCCTGGCAGAGTCTTCAGGATAGGTGGGAGGACTGCTTaGGACCAGGAATTCGACACC +
Preference number: 4 (lower is better)
Translates to: GKVQENFQLSSPGRVFRIGGRTA*DQEFDT
Trigger: GGTGTCGAATTCCTGGTCTCAAGCAGTCCTCCCACC...TATCCTGAAGACTCTGCCAGGAGAGGATAATTGGAAGTTCTCTTGGACCTTACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324689.8
ENST00000328381.10
ENST00000535306.6
CDS-3UTR TCA 90 bp TCCTCTCCTGGCAGAGTCTTCAGGATAATGCTTAATTCTCCCAGCAATGATGTGGGTGGGAGGACTGCTTaGGACCAGGAATTCGACACC +
Preference number: 4 (lower is better)
Translates to: SSPGRVFRIMLNSPSNDVGGRTA*DQEFDT
Trigger: GGTGTCGAATTCCTGGTCTCAAGCAGTCCTCCCACC...CACATCATTGCTGGGAGAATTAAGCATTATCCTGAAGACTCTGCCAGGAGAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324689.8
ENST00000328381.10
ENST00000535306.6
CDS-3UTR GCA 90 bp TTGATGACAGGGAGAGAGACCAGGAAACCACTGTGTTGTAATCCCTTAGGAAACGGAAGCCACCCCAACTaGCCAGTGGCTGCAATTCCT +
Preference number: 4 (lower is better)
Translates to: LMTGRETRKPLCCNPLGNGSHPN*PVAAIP
Trigger: AGGAATTGCAGCCACTGGGCAGTTGGGGTGGCTTCC...GTTTCCTAAGGGATTACAACACAGTGGTTTCCTGGTCTCTCTCCCTGTCATCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324689.8
ENST00000328381.10
ENST00000443677.6
ENST00000535306.6
CDS-3UTR GCA 90 bp TCCTCTCCTGGCAGAGTCTTCAGGATAATGCTTAATTCTCCCAGCAATGATGTGCAAGGTTCAGCCAGATaGCCACCACCCCAGGTCTGT +
Preference number: 4 (lower is better)
Translates to: SSPGRVFRIMLNSPSNDVQGSAR*PPPQVC
Trigger: ACAGACCTGGGGTGGTGGGCATCTGGCTGAACCTTG...CACATCATTGCTGGGAGAATTAAGCATTATCCTGAAGACTCTGCCAGGAGAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324689.8
ENST00000328381.10
ENST00000535306.6
CDS-3UTR CCA 90 bp TCTCCTGGCAGAGTCTTCAGGATAATGCTTAATTCTCCCAGCAATGATGTGTGGAGTGCAGGGTGGCTCTaGTCAGGCAATGGGCATGAG +
Preference number: 4 (lower is better)
Translates to: SPGRVFRIMLNSPSNDVWSAGWL*SGNGHE
Trigger: CTCATGCCCATTGCCTGACCAGAGCCACCCTGCACT...CCACACATCATTGCTGGGAGAATTAAGCATTATCCTGAAGACTCTGCCAGGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324689.8
ENST00000328381.10
ENST00000535306.6
CDS-3UTR CCA 90 bp TCTCCTGGCAGAGTCTTCAGGATAATGCTTAATTCTCCCAGCAATGATGTGTGGCTGTACGGGAATCCTTaGACACCTCCAGGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: SPGRVFRIMLNSPSNDVWLYGNP*TPPGCR
Trigger: CCTGCAGCCTGGAGGTGTCCAAGGATTCCCGTACAG...CCACACATCATTGCTGGGAGAATTAAGCATTATCCTGAAGACTCTGCCAGGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324689.8
ENST00000328381.10
ENST00000535306.6
CDS-3UTR CCA 90 bp ATGCCTAGGTGTCCAGGGCTTTTACTAGGGATTGATCACATTGGCATGCTTCACACCCCAACTGCCCAGTaGCTGCAATTCCTAGTGTCC +
Preference number: 4 (lower is better)
Translates to: MPRCPGLLLGIDHIGMLHTPTAQ*LQFLVS
Trigger: GGACACTAGGAATTGCAGCCACTGGGCAGTTGGGGT...GTGAAGCATGCCAATGTGATCAATCCCTAGTAAAAGCCCTGGACACCTAGGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324689.8
ENST00000328381.10
ENST00000535306.6
CDS-3UTR CCA 90 bp CAAGTTACTACCCTGATTGATGACAGGGAGAGAGACCAGGAAACCACTGTGTTGTGCCATGCAGAGAGCTaGCTAGTCCCCTTCCATTCC +
Preference number: 4 (lower is better)
Translates to: QVTTLIDDRERDQETTVLCHAES*LVPFHS
Trigger: GGAATGGAAGGGGACTAGCCAGCTCTCTGCATGGCA...CAACACAGTGGTTTCCTGGTCTCTCTCCCTGTCATCAATCAGGGTAGTAACTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324689.8
ENST00000328381.10
ENST00000443677.6
ENST00000535306.6
CDS-3UTR CCA 90 bp AGTCAAGTTACTACCCTGATTGATGACAGGGAGAGAGACCAGGAAACCACTGTGTGCCATGCAGAGAGCTaGCTAGTCCCCTTCCATTCC +
Preference number: 4 (lower is better)
Translates to: SQVTTLIDDRERDQETTVCHAES*LVPFHS
Trigger: GGAATGGAAGGGGACTAGCCAGCTCTCTGCATGGCA...CACAGTGGTTTCCTGGTCTCTCTCCCTGTCATCAATCAGGGTAGTAACTTGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324689.8
ENST00000328381.10
ENST00000443677.6
ENST00000535306.6
CDS-3UTR CCA 90 bp GGCAGGGTACAAAGGAGAGGAGGCAGAGATGGTACACTCATACAGAAGCTTCTCGCTTTGGAGAAGCCATaGAAAGATCCACCCCAGAAG +
Preference number: 4 (lower is better)
Translates to: GRVQRRGGRDGTLIQKLLALEKP*KDPPQK
Trigger: CTTCTGGGGTGGATCTTTCCATGGCTTCTCCAAAGC...GAGAAGCTTCTGTATGAGTGTACCATCTCTGCCTCCTCTCCTTTGTACCCTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535306.6
CDS-3UTR TCA 90 bp CCTAGGTGTCCAGGGCTTTTACTAGGGATTGATCACATTGGCATGCTTCACTGCCAAGGACAGTTTCCTTaGCCATGTGCCATGCAGAGA +
Preference number: 4 (lower is better)
Translates to: PRCPGLLLGIDHIGMLHCQGQFP*PCAMQR
Trigger: TCTCTGCATGGCACATGGTCAAGGAAACTGTCCTTG...GCAGTGAAGCATGCCAATGTGATCAATCCCTAGTAAAAGCCCTGGACACCTAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324689.8
ENST00000328381.10
ENST00000535306.6
CDS-3UTR TCA 90 bp TCTCCTGGCAGAGTCTTCAGGATAATGCTTAATTCTCCCAGCAATGATGTGTGGCACCCCAGGTCTGTCTaGGCCAAGGACAGTTTCCTT +
Preference number: 4 (lower is better)
Translates to: SPGRVFRIMLNSPSNDVWHPRSV*AKDSFL
Trigger: AAGGAAACTGTCCTTGGCTCAGACAGACCTGGGGTG...CCACACATCATTGCTGGGAGAATTAAGCATTATCCTGAAGACTCTGCCAGGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324689.8
ENST00000328381.10
ENST00000535306.6
CDS-3UTR TCA 90 bp ACAGGGAGAGAGACCAGGAAACCACTGTGTTGTAATCCCTTAGGAAACCTTACACACCCCAGGTCTGTCTaGGCCAAGGACAGTTTCCTT +
Preference number: 4 (lower is better)
Translates to: TGRETRKPLCCNPLGNLTHPRSV*AKDSFL
Trigger: AAGGAAACTGTCCTTGGCTCAGACAGACCTGGGGTG...TGTAAGGTTTCCTAAGGGATTACAACACAGTGGTTTCCTGGTCTCTCTCCCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324689.8
ENST00000443677.6
ENST00000535306.6
CDS-3UTR TCA 90 bp AGGAGGCAGAGATGGTACACTCATACAGAAGCTTCTCCTGATTGTCCACTGAATAGATCGAGGCTGCAGTaGTTGTGCCACTGCACTCCA +
Preference number: 4 (lower is better)
Translates to: RRQRWYTHTEASPDCPLNRSRLQ*LCHCTP
Trigger: TGGAGTGCAGTGGCACAATCACTGCAGCCTCGATCT...ATTCAGTGGACAATCAGGAGAAGCTTCTGTATGAGTGTACCATCTCTGCCTCCT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535306.6
CDS-3UTR GCA 90 bp TATCAGGCAAGATATTCTAATGGCTTAGAGGTTATCTCCCAGGAGCCAGGCAGGTCTCCTTGCCCAGGATaGTCAGTTCGTTGTCTGGTC +
Preference number: 4 (lower is better)
Translates to: YQARYSNGLEVISQEPGRSPCPG*SVRCLV
Trigger: GACCAGACAACGAACTGAGCATCCTGGGCAAGGAGA...CCTGCCTGGCTCCTGGGAGATAACCTCTAAGCCATTAGAATATCTTGCCTGATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324689.8
CDS-3UTR GCA 90 bp TATCAGGCAAGATATTCTAATGGCTTAGAGGTTATCTCCCAGGAGCCAGGCAGGAAGCCTTGCCCAGGATaGTCAGTTCGTTGTCTGGTC +
Preference number: 4 (lower is better)
Translates to: YQARYSNGLEVISQEPGRKPCPG*SVRCLV
Trigger: GACCAGACAACGAACTGAGCATCCTGGGCAAGGCTT...CCTGCCTGGCTCCTGGGAGATAACCTCTAAGCCATTAGAATATCTTGCCTGATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328381.10
ENST00000535306.6
CDS-3UTR CCA 90 bp GGCAGGGTACAAAGGAGAGGAGGCAGAGATGGTACACTCATACAGAAGCTTCTCCTTCAAGTTAAAGGTTaGATGGATGGCCCACTGAGC +
Preference number: 4 (lower is better)
Translates to: GRVQRRGGRDGTLIQKLLLQVKG*MDGPLS
Trigger: GCTCAGTGGGCCATCCATCCAACCTTTAACTTGAAG...GAGAAGCTTCTGTATGAGTGTACCATCTCTGCCTCCTCTCCTTTGTACCCTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324689.8
ENST00000443677.6
ENST00000535306.6
CDS-3UTR CCA 90 bp GCTTTATTATCAGGTAATTTCCAGGATGTAAGCCATACAGCCAGAAGGCAGGGTCTGTACGGGAATCCTTaGACACCTCCAGGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: ALLSGNFQDVSHTARRQGLYGNP*TPPGCR
Trigger: CCTGCAGCCTGGAGGTGTCCAAGGATTCCCGTACAG...ACCCTGCCTTCTGGCTGTATGGCTTACATCCTGGAAATTACCTGATAATAAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324689.8
ENST00000443677.6
ENST00000535306.6
CDS-3UTR CCA 90 bp AATGGCTTAGAGGTTATCTCCCAGGAGCCAGGCAGGGGCCTATTCTTTATTTGGCAAAAGTGGTATTCTTaGCCAGGTGTGGTGGCTCAC +
Preference number: 4 (lower is better)
Translates to: NGLEVISQEPGRGLFFIWQKWYS*PGVVAH
Trigger: GTGAGCCACCACACCTGGCCAAGAATACCACTTTTG...CCAAATAAAGAATAGGCCCCTGCCTGGCTCCTGGGAGATAACCTCTAAGCCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324689.8
ENST00000328381.10
ENST00000535306.6
CDS-3UTR TCA 90 bp AGAGAGACCAGGAAACCACTGTGTTGTAATCCCTTAGGAAACCTTACACCTTTAGGATGGATGGCCCACTaGGCAAACCGAGAAGCTCTC +
Preference number: 4 (lower is better)
Translates to: RETRKPLCCNPLGNLTPLGWMAH*ANREAL
Trigger: GAGAGCTTCTCGGTTTGCTCAGTGGGCCATCCATCC...TAAAGGTGTAAGGTTTCCTAAGGGATTACAACACAGTGGTTTCCTGGTCTCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324689.8
ENST00000443677.6
ENST00000535306.6
CDS-3UTR TCA 90 bp AATGGCTTAGAGGTTATCTCCCAGGAGCCAGGCAGGGGCCTATTCTTTATTTGGCTCCTGATTGTCCACTaGATAGAAGGCAAGCTTTCC +
Preference number: 4 (lower is better)
Translates to: NGLEVISQEPGRGLFFIWLLIVH*IEGKLS
Trigger: GGAAAGCTTGCCTTCTATTCAGTGGACAATCAGGAG...CCAAATAAAGAATAGGCCCCTGCCTGGCTCCTGGGAGATAACCTCTAAGCCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324689.8
ENST00000328381.10
ENST00000535306.6
CDS-3UTR GCA 90 bp AGAGAGACCAGGAAACCACTGTGTTGTAATCCCTTAGGAAACCTTACACCTTTATTGTCGGCCAGGTCCTaGAGTAGCGTGTTCTTCCGC +
Preference number: 4 (lower is better)
Translates to: RETRKPLCCNPLGNLTPLLSARS*SSVFFR
Trigger: GCGGAAGAACACGCTACTGCAGGACCTGGCCGACAA...TAAAGGTGTAAGGTTTCCTAAGGGATTACAACACAGTGGTTTCCTGGTCTCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324689.8
ENST00000443677.6
ENST00000535306.6
CDS-3UTR GCA 90 bp CAAGTTACTACCCTGATTGATGACAGGGAGAGAGACCAGGAAACCACTGTGTTGGTTTCCTTGACCATGTaGCATGCAGAGAGCTGGCTA +
Preference number: 4 (lower is better)
Translates to: QVTTLIDDRERDQETTVLVSLTM*HAESWL
Trigger: TAGCCAGCTCTCTGCATGGCACATGGTCAAGGAAAC...CAACACAGTGGTTTCCTGGTCTCTCTCCCTGTCATCAATCAGGGTAGTAACTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324689.8
ENST00000328381.10
ENST00000443677.6
ENST00000535306.6
CDS-3UTR GCA 90 bp TTGATGACAGGGAGAGAGACCAGGAAACCACTGTGTTGTAATCCCTTAGGAAACAGAGTAGCTCACCCATaGCTAGGTGTCCAGGGCTTT +
Preference number: 4 (lower is better)
Translates to: LMTGRETRKPLCCNPLGNRVAHP*LGVQGF
Trigger: AAAGCCCTGGACACCTAGGCATGGGTGAGCTACTCT...GTTTCCTAAGGGATTACAACACAGTGGTTTCCTGGTCTCTCTCCCTGTCATCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324689.8
ENST00000328381.10
ENST00000535306.6
CDS-3UTR GCA 90 bp GGTAAGGTCCAAGAGAACTTCCAATTATCCTCTCCTGGCAGAGTCTTCAGGATAAGAGTAGCTCACCCATaGCTAGGTGTCCAGGGCTTT +
Preference number: 4 (lower is better)
Translates to: GKVQENFQLSSPGRVFRIRVAHP*LGVQGF
Trigger: AAAGCCCTGGACACCTAGGCATGGGTGAGCTACTCT...TATCCTGAAGACTCTGCCAGGAGAGGATAATTGGAAGTTCTCTTGGACCTTACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324689.8
ENST00000328381.10
ENST00000535306.6
CDS-3UTR GCA 90 bp TCTCCTGGCAGAGTCTTCAGGATAATGCTTAATTCTCCCAGCAATGATGTGTGGAAGCCTTGCCCAGGATaGTCAGTTCGTTGTCTGGTC +
Preference number: 4 (lower is better)
Translates to: SPGRVFRIMLNSPSNDVWKPCPG*SVRCLV
Trigger: GACCAGACAACGAACTGAGCATCCTGGGCAAGGCTT...CCACACATCATTGCTGGGAGAATTAAGCATTATCCTGAAGACTCTGCCAGGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328381.10
ENST00000535306.6
CDS-3UTR GCA 90 bp AATGGCTTAGAGGTTATCTCCCAGGAGCCAGGCAGGGGCCTATTCTTTATTTGGCAGAAGAAAAAGCCTTaGCCAGGATGCTCAGTTCGT +
Preference number: 4 (lower is better)
Translates to: NGLEVISQEPGRGLFFIWQKKKP*PGCSVR
Trigger: ACGAACTGAGCATCCTGGGCAAGGCTTTTTCTTCTG...CCAAATAAAGAATAGGCCCCTGCCTGGCTCCTGGGAGATAACCTCTAAGCCATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328381.10
ENST00000535306.6
CDS-3UTR GCA 90 bp AGGTGTCCAGGGCTTTTACTAGGGATTGATCACATTGGCATGCTTCACTGCCCAATCTCTGATTTTCCCTaGAGCTGTGTCGGAAGTCAC +
Preference number: 4 (lower is better)
Translates to: RCPGLLLGIDHIGMLHCPISDFP*SCVGSH
Trigger: GTGACTTCCGACACAGCTGCAGGGAAAATCAGAGAT...TGGGCAGTGAAGCATGCCAATGTGATCAATCCCTAGTAAAAGCCCTGGACACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328381.10
ENST00000535306.6
CDS-3UTR CCA 90 bp AATGGCTTAGAGGTTATCTCCCAGGAGCCAGGCAGGGGCCTATTCTTTATTTGGCTTCAAGTTAAAGGTTaGATGGATGGCCCACTGAGC +
Preference number: 4 (lower is better)
Translates to: NGLEVISQEPGRGLFFIWLQVKG*MDGPLS
Trigger: GCTCAGTGGGCCATCCATCCAACCTTTAACTTGAAG...CCAAATAAAGAATAGGCCCCTGCCTGGCTCCTGGGAGATAACCTCTAAGCCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324689.8
ENST00000328381.10
ENST00000535306.6
CDS-3UTR CCA 90 bp CAGAGATGGTACACTCATACAGAAGCTTCTCCTGATTGTCCACTGAATAGAAGGACCCCAACTGCCCAGTaGCTGCAATTCCTAGTGTCC +
Preference number: 4 (lower is better)
Translates to: QRWYTHTEASPDCPLNRRTPTAQ*LQFLVS
Trigger: GGACACTAGGAATTGCAGCCACTGGGCAGTTGGGGT...CCTTCTATTCAGTGGACAATCAGGAGAAGCTTCTGTATGAGTGTACCATCTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324689.8
ENST00000443677.6
ENST00000535306.6
CDS-3UTR CCA 90 bp GTTCATCCTGTATCACACAAAAGGATTAACTTCAAAAGTGGTATTCTTGGCCAGGTCCTTCCCAGGACCTaGTCGCGGCTCATCTCCCAG +
Preference number: 4 (lower is better)
Translates to: VHPVSHKRINFKSGILGQVLPRT*SRLISQ
Trigger: CTGGGAGATGAGCCGCGACCAGGTCCTGGGAAGGAC...CTGGCCAAGAATACCACTTTTGAAGTTAATCCTTTTGTGTGATACAGGATGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324689.8
ENST00000328381.10
ENST00000535306.6
CDS-3UTR CCA 90 bp CCTAGGTGTCCAGGGCTTTTACTAGGGATTGATCACATTGGCATGCTTCACTGCGAGAGGAGGCAGAGATaGTACACTCATACAGAAGCT +
Preference number: 4 (lower is better)
Translates to: PRCPGLLLGIDHIGMLHCERRQR*YTHTEA
Trigger: AGCTTCTGTATGAGTGTACCATCTCTGCCTCCTCTC...GCAGTGAAGCATGCCAATGTGATCAATCCCTAGTAAAAGCCCTGGACACCTAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324689.8
ENST00000328381.10
ENST00000535306.6
CDS-3UTR CCA 90 bp TATCAGGCAAGATATTCTAATGGCTTAGAGGTTATCTCCCAGGAGCCAGGCAGGGCTTTGGAGAAGCCATaGAAAGATCCACCCCAGAAG +
Preference number: 4 (lower is better)
Translates to: YQARYSNGLEVISQEPGRALEKP*KDPPQK
Trigger: CTTCTGGGGTGGATCTTTCCATGGCTTCTCCAAAGC...CCTGCCTGGCTCCTGGGAGATAACCTCTAAGCCATTAGAATATCTTGCCTGATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328381.10
ENST00000535306.6
3UTR CAA 72 bp TATCTCCCAGGAGCCAGGCAGGGGCCTATTCTTTATTaGGAATGTCCAGGGTTCAAACATCCCAAGTTCATC +
Preference number: 4 (lower is better)
Translates to: YLPGARQGPILY*ECPGFKHPKFI
Trigger: GATGAACTTGGGATGTTTGAACCCTGGACATTCCAAATAAAGAATAGGCCCCTGCCTGGCTCCTGGGAGATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324689.8
ENST00000328381.10
ENST00000535306.6
CDS-3UTR TCA 90 bp TTGATGACAGGGAGAGAGACCAGGAAACCACTGTGTTGTAATCCCTTAGGAAACCAAGGACAGTTTCCTTaGCCATGTGCCATGCAGAGA +
Preference number: 4 (lower is better)
Translates to: LMTGRETRKPLCCNPLGNQGQFP*PCAMQR
Trigger: TCTCTGCATGGCACATGGTCAAGGAAACTGTCCTTG...GTTTCCTAAGGGATTACAACACAGTGGTTTCCTGGTCTCTCTCCCTGTCATCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324689.8
ENST00000328381.10
ENST00000443677.6
ENST00000535306.6
CDS-3UTR GCA 90 bp CAGAGATGGTACACTCATACAGAAGCTTCTCCTGATTGTCCACTGAATAGAAGGTCCAGGAGTTCTCCTTaGCCAGGATGCTCAGTTCGT +
Preference number: 4 (lower is better)
Translates to: QRWYTHTEASPDCPLNRRSRSSP*PGCSVR
Trigger: ACGAACTGAGCATCCTGGGCAAGGAGAACTCCTGGA...CCTTCTATTCAGTGGACAATCAGGAGAAGCTTCTGTATGAGTGTACCATCTCTG
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324689.8
CDS-3UTR GCA 90 bp AGGAGGCAGAGATGGTACACTCATACAGAAGCTTCTCCTGATTGTCCACTGAATGTTTCCTTGACCATGTaGCATGCAGAGAGCTGGCTA +
Preference number: 4 (lower is better)
Translates to: RRQRWYTHTEASPDCPLNVSLTM*HAESWL
Trigger: TAGCCAGCTCTCTGCATGGCACATGGTCAAGGAAAC...ATTCAGTGGACAATCAGGAGAAGCTTCTGTATGAGTGTACCATCTCTGCCTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324689.8
ENST00000443677.6
ENST00000535306.6
CDS-3UTR GCA 90 bp CAAGTTACTACCCTGATTGATGACAGGGAGAGAGACCAGGAAACCACTGTGTTGCAGAAGAAAAAGCCTTaGCCAGGATGCTCAGTTCGT +
Preference number: 4 (lower is better)
Translates to: QVTTLIDDRERDQETTVLQKKKP*PGCSVR
Trigger: ACGAACTGAGCATCCTGGGCAAGGCTTTTTCTTCTG...CAACACAGTGGTTTCCTGGTCTCTCTCCCTGTCATCAATCAGGGTAGTAACTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328381.10
ENST00000535306.6
CDS-3UTR GCA 90 bp CAAGTTACTACCCTGATTGATGACAGGGAGAGAGACCAGGAAACCACTGTGTTGATCTCTGATTTTCCCTaGAGCTGTGTCGGAAGTCAC +
Preference number: 4 (lower is better)
Translates to: QVTTLIDDRERDQETTVLISDFP*SCVGSH
Trigger: GTGACTTCCGACACAGCTGCAGGGAAAATCAGAGAT...CAACACAGTGGTTTCCTGGTCTCTCTCCCTGTCATCAATCAGGGTAGTAACTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328381.10
ENST00000535306.6
CDS-3UTR GCA 90 bp GCTTTATTATCAGGTAATTTCCAGGATGTAAGCCATACAGCCAGAAGGCAGGGTGGCAACAGAGAACCCTaGATTTGTGCTTCAGGAGCC +
Preference number: 4 (lower is better)
Translates to: ALLSGNFQDVSHTARRQGGNREP*ICASGA
Trigger: GGCTCCTGAAGCACAAATGCAGGGTTCTCTGTTGCC...ACCCTGCCTTCTGGCTGTATGGCTTACATCCTGGAAATTACCTGATAATAAAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535306.6
CDS-3UTR CCA 90 bp TATCAGGCAAGATATTCTAATGGCTTAGAGGTTATCTCCCAGGAGCCAGGCAGGCTTCAAGTTAAAGGTTaGATGGATGGCCCACTGAGC +
Preference number: 4 (lower is better)
Translates to: YQARYSNGLEVISQEPGRLQVKG*MDGPLS
Trigger: GCTCAGTGGGCCATCCATCCAACCTTTAACTTGAAG...CCTGCCTGGCTCCTGGGAGATAACCTCTAAGCCATTAGAATATCTTGCCTGATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324689.8
ENST00000328381.10
ENST00000535306.6
CDS-3UTR CCA 90 bp AGGTGTCCAGGGCTTTTACTAGGGATTGATCACATTGGCATGCTTCACTGCCCATGGGAACATAAGACCTaGCTGGTAGAAAACCTCTCA +
Preference number: 4 (lower is better)
Translates to: RCPGLLLGIDHIGMLHCPWEHKT*LVENLS
Trigger: TGAGAGGTTTTCTACCAGCCAGGTCTTATGTTCCCA...TGGGCAGTGAAGCATGCCAATGTGATCAATCCCTAGTAAAAGCCCTGGACACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324689.8
ENST00000328381.10
ENST00000535306.6
CDS-3UTR CCA 90 bp TGTCCAGGGCTTTTACTAGGGATTGATCACATTGGCATGCTTCACTGCCCACATGAGAGGAGGCAGAGATaGTACACTCATACAGAAGCT +
Preference number: 4 (lower is better)
Translates to: CPGLLLGIDHIGMLHCPHERRQR*YTHTEA
Trigger: AGCTTCTGTATGAGTGTACCATCTCTGCCTCCTCTC...ATGTGGGCAGTGAAGCATGCCAATGTGATCAATCCCTAGTAAAAGCCCTGGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324689.8
ENST00000328381.10
ENST00000535306.6
CDS-3UTR CCA 90 bp TGTCCAGGGCTTTTACTAGGGATTGATCACATTGGCATGCTTCACTGCCCACATGGAAGTCACCAGCTTTaGAGAAGCCATGGAAAGATC +
Preference number: 4 (lower is better)
Translates to: CPGLLLGIDHIGMLHCPHGSHQL*RSHGKI
Trigger: GATCTTTCCATGGCTTCTCCAAAGCTGGTGACTTCC...ATGTGGGCAGTGAAGCATGCCAATGTGATCAATCCCTAGTAAAAGCCCTGGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328381.10
ENST00000535306.6
CDS-3UTR TCA 90 bp TTGATGACAGGGAGAGAGACCAGGAAACCACTGTGTTGTAATCCCTTAGGAAACGTCAAGTTACTACCCTaGTTGATGACAGGGAGAGAG +
Preference number: 4 (lower is better)
Translates to: LMTGRETRKPLCCNPLGNVKLLP*LMTGRE
Trigger: CTCTCTCCCTGTCATCAATCAGGGTAGTAACTTGAC...GTTTCCTAAGGGATTACAACACAGTGGTTTCCTGGTCTCTCTCCCTGTCATCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324689.8
ENST00000328381.10
ENST00000443677.6
ENST00000535306.6
CDS-3UTR TCA 90 bp CAGGGTACAAAGGAGAGGAGGCAGAGATGGTACACTCATACAGAAGCTTCTCCTGAGCCTCTTTCCAGGTaGCGCTTTCTTGTAATTTTT +
Preference number: 4 (lower is better)
Translates to: QGTKERRQRWYTHTEASPEPLSR*RFLVIF
Trigger: AAAAATTACAAGAAAGCGTCACCTGGAAAGAGGCTC...AGGAGAAGCTTCTGTATGAGTGTACCATCTCTGCCTCCTCTCCTTTGTACCCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535306.6
CDS-3UTR GCA 90 bp AATGGCTTAGAGGTTATCTCCCAGGAGCCAGGCAGGGGCCTATTCTTTATTTGGGGCTACAATGATGTGTaGACAGAGTATTACCAACCA +
Preference number: 4 (lower is better)
Translates to: NGLEVISQEPGRGLFFIWGYNDV*TEYYQP
Trigger: TGGTTGGTAATACTCTGTGCACACATCATTGTAGCC...CCAAATAAAGAATAGGCCCCTGCCTGGCTCCTGGGAGATAACCTCTAAGCCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324689.8
ENST00000328381.10
ENST00000535306.6
CDS-3UTR GCA 90 bp AGGTGTCCAGGGCTTTTACTAGGGATTGATCACATTGGCATGCTTCACTGCCCAGGCTACAATGATGTGTaGACAGAGTATTACCAACCA +
Preference number: 4 (lower is better)
Translates to: RCPGLLLGIDHIGMLHCPGYNDV*TEYYQP
Trigger: TGGTTGGTAATACTCTGTGCACACATCATTGTAGCC...TGGGCAGTGAAGCATGCCAATGTGATCAATCCCTAGTAAAAGCCCTGGACACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324689.8
ENST00000328381.10
ENST00000535306.6
CDS-3UTR CCA 90 bp GTTCATCCTGTATCACACAAAAGGATTAACTTCAAAAGTGGTATTCTTGGCCAGCCAGCGATAGGGTTGTaGGCGGTGAGACACAGTCAC +
Preference number: 4 (lower is better)
Translates to: VHPVSHKRINFKSGILGQPAIGL*AVRHSH
Trigger: GTGACTGTGTCTCACCGCCCACAACCCTATCGCTGG...CTGGCCAAGAATACCACTTTTGAAGTTAATCCTTTTGTGTGATACAGGATGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324689.8
ENST00000328381.10
ENST00000535306.6
CDS-3UTR CCA 90 bp AGGAGGCAGAGATGGTACACTCATACAGAAGCTTCTCCTGATTGTCCACTGAATGAGAGGAGGCAGAGATaGTACACTCATACAGAAGCT +
Preference number: 4 (lower is better)
Translates to: RRQRWYTHTEASPDCPLNERRQR*YTHTEA
Trigger: AGCTTCTGTATGAGTGTACCATCTCTGCCTCCTCTC...ATTCAGTGGACAATCAGGAGAAGCTTCTGTATGAGTGTACCATCTCTGCCTCCT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324689.8
ENST00000443677.6
ENST00000535306.6
CDS-3UTR CCA 90 bp GGCAGGGTACAAAGGAGAGGAGGCAGAGATGGTACACTCATACAGAAGCTTCTCGGCCTATTCTTTATTTaGAATGTCCAGGGTTCAAAC +
Preference number: 4 (lower is better)
Translates to: GRVQRRGGRDGTLIQKLLGLFFI*NVQGSN
Trigger: GTTTGAACCCTGGACATTCCAAATAAAGAATAGGCC...GAGAAGCTTCTGTATGAGTGTACCATCTCTGCCTCCTCTCCTTTGTACCCTGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324689.8
ENST00000535306.6
CDS-3UTR CCA 90 bp AATGGCTTAGAGGTTATCTCCCAGGAGCCAGGCAGGGGCCTATTCTTTATTTGGCCAATTATCCTCTCCTaGCAGAGTCTTCAGGATAAT +
Preference number: 4 (lower is better)
Translates to: NGLEVISQEPGRGLFFIWPIILS*QSLQDN
Trigger: ATTATCCTGAAGACTCTGCCAGGAGAGGATAATTGG...CCAAATAAAGAATAGGCCCCTGCCTGGCTCCTGGGAGATAACCTCTAAGCCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324689.8
ENST00000328381.10
ENST00000535306.6
CDS-3UTR TCA 90 bp GCTTTATTATCAGGTAATTTCCAGGATGTAAGCCATACAGCCAGAAGGCAGGGTCTCCTGATTGTCCACTaGATAGAAGGCAAGCTTTCC +
Preference number: 4 (lower is better)
Translates to: ALLSGNFQDVSHTARRQGLLIVH*IEGKLS
Trigger: GGAAAGCTTGCCTTCTATTCAGTGGACAATCAGGAG...ACCCTGCCTTCTGGCTGTATGGCTTACATCCTGGAAATTACCTGATAATAAAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324689.8
ENST00000443677.6
ENST00000535306.6
CDS-3UTR TCA 90 bp AAGGAGAGGAGGCAGAGATGGTACACTCATACAGAAGCTTCTCCTGATTGTCCAGATGTGTGGCTACAATaGTGTGTGCACAGAGTATTA +
Preference number: 4 (lower is better)
Translates to: KERRQRWYTHTEASPDCPDVWLQ*CVHRVL
Trigger: TAATACTCTGTGCACACATCATTGTAGCCACACATC...TGGACAATCAGGAGAAGCTTCTGTATGAGTGTACCATCTCTGCCTCCTCTCCTT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324689.8
ENST00000535306.6
CDS-3UTR CCA 90 bp CTGTGTTGTAATCCCTTAGGAAACCTTACACCTTTACTTGCTTTATTATCAGGTAGTGCAGGGTGGCTCTaGTCAGGCAATGGGCATGAG +
Preference number: 4 (lower is better)
Translates to: LCCNPLGNLTPLLALLSGSAGWL*SGNGHE
Trigger: CTCATGCCCATTGCCTGACCAGAGCCACCCTGCACT...ACCTGATAATAAAGCAAGTAAAGGTGTAAGGTTTCCTAAGGGATTACAACACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324689.8
ENST00000443677.6
ENST00000535306.6
CDS-3UTR CCA 90 bp AGGAGGCAGAGATGGTACACTCATACAGAAGCTTCTCCTGATTGTCCACTGAATTGGGAACATAAGACCTaGCTGGTAGAAAACCTCTCA +
Preference number: 4 (lower is better)
Translates to: RRQRWYTHTEASPDCPLNWEHKT*LVENLS
Trigger: TGAGAGGTTTTCTACCAGCCAGGTCTTATGTTCCCA...ATTCAGTGGACAATCAGGAGAAGCTTCTGTATGAGTGTACCATCTCTGCCTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324689.8
ENST00000443677.6
ENST00000535306.6
CDS-3UTR CCA 90 bp TATCAGGCAAGATATTCTAATGGCTTAGAGGTTATCTCCCAGGAGCCAGGCAGGCCAATTATCCTCTCCTaGCAGAGTCTTCAGGATAAT +
Preference number: 4 (lower is better)
Translates to: YQARYSNGLEVISQEPGRPIILS*QSLQDN
Trigger: ATTATCCTGAAGACTCTGCCAGGAGAGGATAATTGG...CCTGCCTGGCTCCTGGGAGATAACCTCTAAGCCATTAGAATATCTTGCCTGATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324689.8
ENST00000328381.10
ENST00000535306.6
CDS-3UTR TCA 90 bp TCCTCTCCTGGCAGAGTCTTCAGGATAATGCTTAATTCTCCCAGCAATGATGTGGATGTGTGGCTACAATaGTGTGTGCACAGAGTATTA +
Preference number: 4 (lower is better)
Translates to: SSPGRVFRIMLNSPSNDVDVWLQ*CVHRVL
Trigger: TAATACTCTGTGCACACATCATTGTAGCCACACATC...CACATCATTGCTGGGAGAATTAAGCATTATCCTGAAGACTCTGCCAGGAGAGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324689.8
ENST00000328381.10
ENST00000535306.6
CDS-3UTR GCA 90 bp GGTAAGGTCCAAGAGAACTTCCAATTATCCTCTCCTGGCAGAGTCTTCAGGATAGGCTACAATGATGTGTaGACAGAGTATTACCAACCA +
Preference number: 4 (lower is better)
Translates to: GKVQENFQLSSPGRVFRIGYNDV*TEYYQP
Trigger: TGGTTGGTAATACTCTGTGCACACATCATTGTAGCC...TATCCTGAAGACTCTGCCAGGAGAGGATAATTGGAAGTTCTCTTGGACCTTACC
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324689.8
ENST00000328381.10
ENST00000535306.6
CDS-3UTR CCA 90 bp TCTCCTGGCAGAGTCTTCAGGATAATGCTTAATTCTCCCAGCAATGATGTGTGGCCAATTATCCTCTCCTaGCAGAGTCTTCAGGATAAT +
Preference number: 4 (lower is better)
Translates to: SPGRVFRIMLNSPSNDVWPIILS*QSLQDN
Trigger: ATTATCCTGAAGACTCTGCCAGGAGAGGATAATTGG...CCACACATCATTGCTGGGAGAATTAAGCATTATCCTGAAGACTCTGCCAGGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324689.8
ENST00000328381.10
ENST00000535306.6
CDS-3UTR GCA 90 bp GTTCATCCTGTATCACACAAAAGGATTAACTTCAAAAGTGGTATTCTTGGCCAGGTTTCCTTGACCATGTaGCATGCAGAGAGCTGGCTA +
Preference number: 4 (lower is better)
Translates to: VHPVSHKRINFKSGILGQVSLTM*HAESWL
Trigger: TAGCCAGCTCTCTGCATGGCACATGGTCAAGGAAAC...CTGGCCAAGAATACCACTTTTGAAGTTAATCCTTTTGTGTGATACAGGATGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324689.8
ENST00000328381.10
ENST00000535306.6
CDS-3UTR CCA 90 bp AGAGAGACCAGGAAACCACTGTGTTGTAATCCCTTAGGAAACCTTACACCTTTATGGGAACATAAGACCTaGCTGGTAGAAAACCTCTCA +
Preference number: 4 (lower is better)
Translates to: RETRKPLCCNPLGNLTPLWEHKT*LVENLS
Trigger: TGAGAGGTTTTCTACCAGCCAGGTCTTATGTTCCCA...TAAAGGTGTAAGGTTTCCTAAGGGATTACAACACAGTGGTTTCCTGGTCTCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324689.8
ENST00000443677.6
ENST00000535306.6
CDS-3UTR CCA 90 bp CAAGAGAACTTCCAATTATCCTCTCCTGGCAGAGTCTTCAGGATAATGCTTAATGAGAGGAGGCAGAGATaGTACACTCATACAGAAGCT +
Preference number: 4 (lower is better)
Translates to: QENFQLSSPGRVFRIMLNERRQR*YTHTEA
Trigger: AGCTTCTGTATGAGTGTACCATCTCTGCCTCCTCTC...ATTAAGCATTATCCTGAAGACTCTGCCAGGAGAGGATAATTGGAAGTTCTCTTG
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324689.8
ENST00000328381.10
ENST00000535306.6
CDS-3UTR CCA 90 bp GTTCATCCTGTATCACACAAAAGGATTAACTTCAAAAGTGGTATTCTTGGCCAGCAAAAGTGGTATTCTTaGCCAGGTGTGGTGGCTCAC +
Preference number: 4 (lower is better)
Translates to: VHPVSHKRINFKSGILGQQKWYS*PGVVAH
Trigger: GTGAGCCACCACACCTGGCCAAGAATACCACTTTTG...CTGGCCAAGAATACCACTTTTGAAGTTAATCCTTTTGTGTGATACAGGATGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000324689.8
ENST00000328381.10
ENST00000535306.6
CDS-3UTR CCA 90 bp GGTAAGGTCCAAGAGAACTTCCAATTATCCTCTCCTGGCAGAGTCTTCAGGATAGGCCTATTCTTTATTTaGAATGTCCAGGGTTCAAAC +
Preference number: 4 (lower is better)
Translates to: GKVQENFQLSSPGRVFRIGLFFI*NVQGSN
Trigger: GTTTGAACCCTGGACATTCCAAATAAAGAATAGGCC...TATCCTGAAGACTCTGCCAGGAGAGGATAATTGGAAGTTCTCTTGGACCTTACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324689.8
ENST00000328381.10
ENST00000535306.6
CDS-3UTR TCA 90 bp GTTCATCCTGTATCACACAAAAGGATTAACTTCAAAAGTGGTATTCTTGGCCAGCTCCTGATTGTCCACTaGATAGAAGGCAAGCTTTCC +
Preference number: 4 (lower is better)
Translates to: VHPVSHKRINFKSGILGQLLIVH*IEGKLS
Trigger: GGAAAGCTTGCCTTCTATTCAGTGGACAATCAGGAG...CTGGCCAAGAATACCACTTTTGAAGTTAATCCTTTTGTGTGATACAGGATGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324689.8
ENST00000328381.10
ENST00000535306.6
CDS-3UTR TCA 90 bp CAAGAGAACTTCCAATTATCCTCTCCTGGCAGAGTCTTCAGGATAATGCTTAATGATTCTGCAGGCTTCTaGCAATGTCTACAAGATGTT +
Preference number: 4 (lower is better)
Translates to: QENFQLSSPGRVFRIMLNDSAGF*QCLQDV
Trigger: AACATCTTGTAGACATTGTCAGAAGCCTGCAGAATC...ATTAAGCATTATCCTGAAGACTCTGCCAGGAGAGGATAATTGGAAGTTCTCTTG
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324689.8
ENST00000328381.10
ENST00000535306.6
CDS-3UTR TCA 90 bp CTGTGTTGTAATCCCTTAGGAAACCTTACACCTTTACTTGCTTTATTATCAGGTGTCAAGTTACTACCCTaGTTGATGACAGGGAGAGAG +
Preference number: 4 (lower is better)
Translates to: LCCNPLGNLTPLLALLSGVKLLP*LMTGRE
Trigger: CTCTCTCCCTGTCATCAATCAGGGTAGTAACTTGAC...ACCTGATAATAAAGCAAGTAAAGGTGTAAGGTTTCCTAAGGGATTACAACACAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324689.8
ENST00000443677.6
ENST00000535306.6
CDS-3UTR TCA 90 bp CAAGAGAACTTCCAATTATCCTCTCCTGGCAGAGTCTTCAGGATAATGCTTAATGAGCCTCTTTCCAGGTaGCGCTTTCTTGTAATTTTT +
Preference number: 4 (lower is better)
Translates to: QENFQLSSPGRVFRIMLNEPLSR*RFLVIF
Trigger: AAAAATTACAAGAAAGCGTCACCTGGAAAGAGGCTC...ATTAAGCATTATCCTGAAGACTCTGCCAGGAGAGGATAATTGGAAGTTCTCTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328381.10
ENST00000535306.6
CDS CCA 90 bp CGGCCAGCCACACGGGAACGGCGGAGCCCAGGCCCAGGCCCGCCATaGCCAACAGGCGGCCGGGGCGCGGACGTCGGGGTTGAGCCGGGC +
Preference number: 5 (lower is better)
Translates to: RPATRERRSPGPGPP*PTGGRGADVGVEPG
Trigger: GCCCGGCTCAACCCCGACGTCCGCGCCCCGGCCGCCTGTTGGCCATGGCGGGCCTGGGCCTGGGCTCCGCCGTTCCCGTGTGGCTGGCCG
80% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324689.8
ENST00000443677.6
CDS CCA 90 bp TGTTCTTCCGCAGGTGCGGCTGCTGCGCGGCGCCCTGGCGGCAAGTaGGGCAGGCCCAGCGGCGGGCGTCGCGGGCGCCCCACAGGGCCT +
Preference number: 5 (lower is better)
Translates to: CSSAGAAAARRPGGK*GRPSGGRRGRPTGP
Trigger: AGGCCCTGTGGGGCGCCCGCGACGCCCGCCGCTGGGCCTGCCCCACTTGCCGCCAGGGCGCCGCGCAGCAGCCGCACCTGCGGAAGAACA
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324689.8
ENST00000328381.10
ENST00000443677.6
ENST00000535306.6
ENST00000580444.2
CDS GCA 90 bp TCGGCCAGGTCCTGCAGTAGCGTGTTCTTCCGCAGGTGCGGCTGCTaGGCGGCGCCCTGGCGGCAAGTGGGGCAGGCCCAGCGGCGGGCG +
Preference number: 5 (lower is better)
Translates to: SARSCSSVFFRRCGC*AAPWRQVGQAQRRA
Trigger: CGCCCGCCGCTGGGCCTGCCCCACTTGCCGCCAGGGCGCCGCGCAGCAGCCGCACCTGCGGAAGAACACGCTACTGCAGGACCTGGCCGA
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324689.8
ENST00000328381.10
ENST00000443677.6
ENST00000535306.6
ENST00000580444.2
CDS TCA 90 bp AGGCCCGCCATGGCCAACAGGCGGCCGGGGCGCGGACGTCGGGGTTaGGCCGGGCGAGTCTCCTCAGGCTCCTCCCTCGCCCTTCCTCTT +
Preference number: 5 (lower is better)
Translates to: RPAMANRRPGRGRRG*AGRVSSGSSLALPL
Trigger: AAGAGGAAGGGCGAGGGAGGAGCCTGAGGAGACTCGCCCGGCTCAACCCCGACGTCCGCGCCCCGGCCGCCTGTTGGCCATGGCGGGCCT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443677.6
CDS GCA 90 bp TTGTCGGCCAGGTCCTGCAGTAGCGTGTTCTTCCGCAGGTGCGGCTaGTGCGCGGCGCCCTGGCGGCAAGTGGGGCAGGCCCAGCGGCGG +
Preference number: 5 (lower is better)
Translates to: LSARSCSSVFFRRCG*CAAPWRQVGQAQRR
Trigger: CCGCCGCTGGGCCTGCCCCACTTGCCGCCAGGGCGCCGCGCAGCAGCCGCACCTGCGGAAGAACACGCTACTGCAGGACCTGGCCGACAA
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324689.8
ENST00000328381.10
ENST00000443677.6
ENST00000535306.6
ENST00000580444.2
CDS GCA 90 bp GCCTGTATCTCGCGTGCGGCGCGGCGGTACTTGTCGGCCAGGTCCTaGAGTAGCGTGTTCTTCCGCAGGTGCGGCTGCTGCGCGGCGCCC +
Preference number: 5 (lower is better)
Translates to: ACISRAARRYLSARS*SSVFFRRCGCCAAP
Trigger: GGGCGCCGCGCAGCAGCCGCACCTGCGGAAGAACACGCTACTGCAGGACCTGGCCGACAAGTACCGCCGCGCCGCACGCGAGATACAGGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324689.8
ENST00000328381.10
ENST00000443677.6
ENST00000535306.6
ENST00000580444.2
CDS-3UTR CAA 90 bp TTGTGGGCGGTGAGACACAGTCACTGTACGGGAATCCTTGGACACCTCCAGGCTGCGGCGCGGCGGTACTaGTCGGCCAGGTCCTGCAGT +
Preference number: 5 (lower is better)
Translates to: LWAVRHSHCTGILGHLQAAARRY*SARSCS
Trigger: ACTGCAGGACCTGGCCGACAAGTACCGCCGCGCCGC...AGCCTGGAGGTGTCCAAGGATTCCCGTACAGTGACTGTGTCTCACCGCCCACAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324689.8
ENST00000443677.6
ENST00000535306.6
CDS-3UTR CAA 90 bp GACAGTTTCCTTGACCATGTGCCATGCAGAGAGCTGGCTAGTCCCCTTCCATTCGCGCGGACGTCGGGGTaGAGCCGGGCGAGTCTCCTC +
Preference number: 5 (lower is better)
Translates to: DSFLDHVPCRELASPLPFARTSG*SRASLL
Trigger: GAGGAGACTCGCCCGGCTCAACCCCGACGTCCGCGC...GAATGGAAGGGGACTAGCCAGCTCTCTGCATGGCACATGGTCAAGGAAACTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443677.6
CDS-3UTR CAA 90 bp CCCAACTGCCCAGTGGCTGCAATTCCTAGTGTCCACTTCCCAGTAATGCTTTCCGCGGCGCGGCGGTACTaGTCGGCCAGGTCCTGCAGT +
Preference number: 5 (lower is better)
Translates to: PNCPVAAIPSVHFPVMLSAARRY*SARSCS
Trigger: ACTGCAGGACCTGGCCGACAAGTACCGCCGCGCCGC...GGAAAGCATTACTGGGAAGTGGACACTAGGAATTGCAGCCACTGGGCAGTTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324689.8
ENST00000443677.6
ENST00000535306.6
CDS-3UTR CAA 90 bp GAGTCCATAGTCCTTCCCAGGACCTGGTCGCGGCTCATCTCCCAGGAAGCCACCAGGTGGGAGGACTGCTaGAGACCAGGAATTCGACAC +
Preference number: 5 (lower is better)
Translates to: ESIVLPRTWSRLISQEATRWEDC*RPGIRH
Trigger: GTGTCGAATTCCTGGTCTCAAGCAGTCCTCCCACCT...GGTGGCTTCCTGGGAGATGAGCCGCGACCAGGTCCTGGGAAGGACTATGGACTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324689.8
ENST00000443677.6
ENST00000535306.6
CDS-3UTR CAA 90 bp AGTCAAGTTACTACCCTGATTGATGACAGGGAGAGAGACCAGGAAACCACTGTGGCGGCGCGGCGGTACTaGTCGGCCAGGTCCTGCAGT +
Preference number: 5 (lower is better)
Translates to: SQVTTLIDDRERDQETTVAARRY*SARSCS
Trigger: ACTGCAGGACCTGGCCGACAAGTACCGCCGCGCCGC...CACAGTGGTTTCCTGGTCTCTCTCCCTGTCATCAATCAGGGTAGTAACTTGACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324689.8
ENST00000328381.10
ENST00000443677.6
ENST00000535306.6
CDS-3UTR CAA 90 bp TTGTGGGCGGTGAGACACAGTCACTGTACGGGAATCCTTGGACACCTCCAGGCTACTGTACGGGAATCCTaGGACACCTCCAGGCTGCAG +
Preference number: 5 (lower is better)
Translates to: LWAVRHSHCTGILGHLQATVRES*DTSRLQ
Trigger: CTGCAGCCTGGAGGTGTCCAAGGATTCCCGTACAGT...AGCCTGGAGGTGTCCAAGGATTCCCGTACAGTGACTGTGTCTCACCGCCCACAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324689.8
ENST00000443677.6
ENST00000535306.6
CDS-3UTR CAA 90 bp GATAGGGTTGTGGGCGGTGAGACACAGTCACTGTACGGGAATCCTTGGACACCTACTGTACGGGAATCCTaGGACACCTCCAGGCTGCAG +
Preference number: 5 (lower is better)
Translates to: DRVVGGETQSLYGNPWTPTVRES*DTSRLQ
Trigger: CTGCAGCCTGGAGGTGTCCAAGGATTCCCGTACAGT...AGGTGTCCAAGGATTCCCGTACAGTGACTGTGTCTCACCGCCCACAACCCTATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324689.8
ENST00000443677.6
ENST00000535306.6
CDS-3UTR CAA 90 bp CCCAACTGCCCAGTGGCTGCAATTCCTAGTGTCCACTTCCCAGTAATGCTTTCCACTGTACGGGAATCCTaGGACACCTCCAGGCTGCAG +
Preference number: 5 (lower is better)
Translates to: PNCPVAAIPSVHFPVMLSTVRES*DTSRLQ
Trigger: CTGCAGCCTGGAGGTGTCCAAGGATTCCCGTACAGT...GGAAAGCATTACTGGGAAGTGGACACTAGGAATTGCAGCCACTGGGCAGTTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324689.8
ENST00000443677.6
ENST00000535306.6
CDS-3UTR CAA 90 bp GACACAGTCACTGTACGGGAATCCTTGGACACCTCCAGGCTGCAGGAAAGGCTCCCAAGGACAGTTTCCTaGACCATGTGCCATGCAGAG +
Preference number: 5 (lower is better)
Translates to: DTVTVRESLDTSRLQERLPRTVS*TMCHAE
Trigger: CTCTGCATGGCACATGGTCAAGGAAACTGTCCTTGG...GAGCCTTTCCTGCAGCCTGGAGGTGTCCAAGGATTCCCGTACAGTGACTGTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324689.8
ENST00000443677.6
ENST00000535306.6
CDS-3UTR CAA 90 bp TTGTGGGCGGTGAGACACAGTCACTGTACGGGAATCCTTGGACACCTCCAGGCTCCAGAAGAAAAAGCCTaGCCCAGGATGCTCAGTTCG +
Preference number: 5 (lower is better)
Translates to: LWAVRHSHCTGILGHLQAPEEKA*PRMLSS
Trigger: CGAACTGAGCATCCTGGGCAAGGCTTTTTCTTCTGG...AGCCTGGAGGTGTCCAAGGATTCCCGTACAGTGACTGTGTCTCACCGCCCACAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000535306.6
CDS-3UTR CAA 90 bp AGAGAGACCAGGAAACCACTGTGTTGTAATCCCTTAGGAAACCTTACACCTTTAGCGGCGCGGCGGTACTaGTCGGCCAGGTCCTGCAGT +
Preference number: 5 (lower is better)
Translates to: RETRKPLCCNPLGNLTPLAARRY*SARSCS
Trigger: ACTGCAGGACCTGGCCGACAAGTACCGCCGCGCCGC...TAAAGGTGTAAGGTTTCCTAAGGGATTACAACACAGTGGTTTCCTGGTCTCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324689.8
ENST00000443677.6
ENST00000535306.6
CDS-3UTR CAA 90 bp CCTAGGTGTCCAGGGCTTTTACTAGGGATTGATCACATTGGCATGCTTCACTGCGCTCCAGCGATAGGGTaGTGGGCGGTGAGACACAGT +
Preference number: 5 (lower is better)
Translates to: PRCPGLLLGIDHIGMLHCAPAIG*WAVRHS
Trigger: ACTGTGTCTCACCGCCCACAACCCTATCGCTGGAGC...GCAGTGAAGCATGCCAATGTGATCAATCCCTAGTAAAAGCCCTGGACACCTAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324689.8
ENST00000328381.10
ENST00000535306.6
CDS-3UTR CAA 90 bp GACACAGTCACTGTACGGGAATCCTTGGACACCTCCAGGCTGCAGGAAAGGCTCCTTAGTCTCCTCAGCTaGACCTTGCAAGGTCAAGCT +
Preference number: 5 (lower is better)
Translates to: DTVTVRESLDTSRLQERLLSLLS*TLQGQA
Trigger: AGCTTGACCTTGCAAGGTCAAGCTGAGGAGACTAAG...GAGCCTTTCCTGCAGCCTGGAGGTGTCCAAGGATTCCCGTACAGTGACTGTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324689.8
ENST00000535306.6
CDS-3UTR CAA 90 bp TGTCCAGGGCTTTTACTAGGGATTGATCACATTGGCATGCTTCACTGCCCACATGCTCCAGCGATAGGGTaGTGGGCGGTGAGACACAGT +
Preference number: 5 (lower is better)
Translates to: CPGLLLGIDHIGMLHCPHAPAIG*WAVRHS
Trigger: ACTGTGTCTCACCGCCCACAACCCTATCGCTGGAGC...ATGTGGGCAGTGAAGCATGCCAATGTGATCAATCCCTAGTAAAAGCCCTGGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324689.8
ENST00000328381.10
ENST00000535306.6
CDS-3UTR CAA 90 bp CAAGTTACTACCCTGATTGATGACAGGGAGAGAGACCAGGAAACCACTGTGTTGGCTCCAGCGATAGGGTaGTGGGCGGTGAGACACAGT +
Preference number: 5 (lower is better)
Translates to: QVTTLIDDRERDQETTVLAPAIG*WAVRHS
Trigger: ACTGTGTCTCACCGCCCACAACCCTATCGCTGGAGC...CAACACAGTGGTTTCCTGGTCTCTCTCCCTGTCATCAATCAGGGTAGTAACTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324689.8
ENST00000328381.10
ENST00000443677.6
ENST00000535306.6
CDS-3UTR CAA 90 bp AAGGAGAGGAGGCAGAGATGGTACACTCATACAGAAGCTTCTCCTGATTGTCCAGCTCCAGCGATAGGGTaGTGGGCGGTGAGACACAGT +
Preference number: 5 (lower is better)
Translates to: KERRQRWYTHTEASPDCPAPAIG*WAVRHS
Trigger: ACTGTGTCTCACCGCCCACAACCCTATCGCTGGAGC...TGGACAATCAGGAGAAGCTTCTGTATGAGTGTACCATCTCTGCCTCCTCTCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324689.8
ENST00000443677.6
ENST00000535306.6
CDS-3UTR CAA 90 bp TTTCCAGGATGTAAGCCATACAGCCAGAAGGCAGGGTACAAAGGAGAGGAGGCAAGGTGGGAGGACTGCTaGAGACCAGGAATTCGACAC +
Preference number: 5 (lower is better)
Translates to: FPGCKPYSQKAGYKGEEARWEDC*RPGIRH
Trigger: GTGTCGAATTCCTGGTCTCAAGCAGTCCTCCCACCT...TGCCTCCTCTCCTTTGTACCCTGCCTTCTGGCTGTATGGCTTACATCCTGGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324689.8
ENST00000443677.6
ENST00000535306.6
CDS-3UTR CAA 90 bp GGCAGGGTACAAAGGAGAGGAGGCAGAGATGGTACACTCATACAGAAGCTTCTCAGGTGGGAGGACTGCTaGAGACCAGGAATTCGACAC +
Preference number: 5 (lower is better)
Translates to: GRVQRRGGRDGTLIQKLLRWEDC*RPGIRH
Trigger: GTGTCGAATTCCTGGTCTCAAGCAGTCCTCCCACCT...GAGAAGCTTCTGTATGAGTGTACCATCTCTGCCTCCTCTCCTTTGTACCCTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324689.8
ENST00000443677.6
ENST00000535306.6
CDS-3UTR CAA 90 bp CCTAGGTGTCCAGGGCTTTTACTAGGGATTGATCACATTGGCATGCTTCACTGCTTCCAGGAGTTCTCCTaGCCCAGGATGCTCAGTTCG +
Preference number: 5 (lower is better)
Translates to: PRCPGLLLGIDHIGMLHCFQEFS*PRMLSS
Trigger: CGAACTGAGCATCCTGGGCAAGGAGAACTCCTGGAA...GCAGTGAAGCATGCCAATGTGATCAATCCCTAGTAAAAGCCCTGGACACCTAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324689.8
CDS TCA 90 bp TGTCTGGTCCAGATTCTGATAGGGGCCTCTGATTCTGCAGGCTTCTaGCAATGTCTACAAGATGTTCCACCAGCTCTGTCAGCTCCTGAG +
Preference number: 5 (lower is better)
Translates to: CLVQILIGASDSAGF*QCLQDVPPALSAPE
Trigger: CTCAGGAGCTGACAGAGCTGGTGGAACATCTTGTAGACATTGTCAGAAGCCTGCAGAATCAGAGGCCCCTATCAGAATCTGGACCAGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324689.8
ENST00000328381.10
ENST00000535306.6
CDS-3UTR CAA 90 bp AAGGCAGGGTACAAAGGAGAGGAGGCAGAGATGGTACACTCATACAGAAGCTTCCCAAGGACAGTTTCCTaGACCATGTGCCATGCAGAG +
Preference number: 5 (lower is better)
Translates to: KAGYKGEEAEMVHSYRSFPRTVS*TMCHAE
Trigger: CTCTGCATGGCACATGGTCAAGGAAACTGTCCTTGG...GAAGCTTCTGTATGAGTGTACCATCTCTGCCTCCTCTCCTTTGTACCCTGCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324689.8
ENST00000443677.6
ENST00000535306.6
CDS-3UTR CAA 90 bp AATGGCTTAGAGGTTATCTCCCAGGAGCCAGGCAGGGGCCTATTCTTTATTTGGCCAAGGACAGTTTCCTaGACCATGTGCCATGCAGAG +
Preference number: 5 (lower is better)
Translates to: NGLEVISQEPGRGLFFIWPRTVS*TMCHAE
Trigger: CTCTGCATGGCACATGGTCAAGGAAACTGTCCTTGG...CCAAATAAAGAATAGGCCCCTGCCTGGCTCCTGGGAGATAACCTCTAAGCCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324689.8
ENST00000328381.10
ENST00000535306.6
CDS-3UTR CAA 90 bp GACACAGTCACTGTACGGGAATCCTTGGACACCTCCAGGCTGCAGGAAAGGCTCGGGCCTATTCTTTATTaGGAATGTCCAGGGTTCAAA +
Preference number: 5 (lower is better)
Translates to: DTVTVRESLDTSRLQERLGPILY*ECPGFK
Trigger: TTTGAACCCTGGACATTCCAAATAAAGAATAGGCCC...GAGCCTTTCCTGCAGCCTGGAGGTGTCCAAGGATTCCCGTACAGTGACTGTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324689.8
ENST00000535306.6
CDS-3UTR CAA 90 bp AATGGCTTAGAGGTTATCTCCCAGGAGCCAGGCAGGGGCCTATTCTTTATTTGGCCAGAAGAAAAAGCCTaGCCCAGGATGCTCAGTTCG +
Preference number: 5 (lower is better)
Translates to: NGLEVISQEPGRGLFFIWPEEKA*PRMLSS
Trigger: CGAACTGAGCATCCTGGGCAAGGCTTTTTCTTCTGG...CCAAATAAAGAATAGGCCCCTGCCTGGCTCCTGGGAGATAACCTCTAAGCCATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328381.10
ENST00000535306.6
CDS TCA 90 bp AGGATGCTCAGTTCGTTGTCTGGTCCAGATTCTGATAGGGGCCTCTaGTTCTGCAGGCTTCTGACAATGTCTACAAGATGTTCCACCAGC +
Preference number: 5 (lower is better)
Translates to: RMLSSLSGPDSDRGL*FCRLLTMSTRCSTS
Trigger: GCTGGTGGAACATCTTGTAGACATTGTCAGAAGCCTGCAGAATCAGAGGCCCCTATCAGAATCTGGACCAGACAACGAACTGAGCATCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324689.8
ENST00000328381.10
ENST00000535306.6
CDS-3UTR CAA 90 bp AAGGCAGGGTACAAAGGAGAGGAGGCAGAGATGGTACACTCATACAGAAGCTTCCTTAGTCTCCTCAGCTaGACCTTGCAAGGTCAAGCT +
Preference number: 5 (lower is better)
Translates to: KAGYKGEEAEMVHSYRSFLSLLS*TLQGQA
Trigger: AGCTTGACCTTGCAAGGTCAAGCTGAGGAGACTAAG...GAAGCTTCTGTATGAGTGTACCATCTCTGCCTCCTCTCCTTTGTACCCTGCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324689.8
ENST00000535306.6
CDS-3UTR CAA 90 bp TGTCCAGGGCTTTTACTAGGGATTGATCACATTGGCATGCTTCACTGCCCACATCTTAGTCTCCTCAGCTaGACCTTGCAAGGTCAAGCT +
Preference number: 5 (lower is better)
Translates to: CPGLLLGIDHIGMLHCPHLSLLS*TLQGQA
Trigger: AGCTTGACCTTGCAAGGTCAAGCTGAGGAGACTAAG...ATGTGGGCAGTGAAGCATGCCAATGTGATCAATCCCTAGTAAAAGCCCTGGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324689.8
ENST00000328381.10
ENST00000535306.6
CDS-3UTR CAA 90 bp CCCAGGAGCCAGGCAGGGGCCTATTCTTTATTTGGAATGTCCAGGGTTCAAACAGGGCCTATTCTTTATTaGGAATGTCCAGGGTTCAAA +
Preference number: 5 (lower is better)
Translates to: PRSQAGAYSLFGMSRVQTGPILY*ECPGFK
Trigger: TTTGAACCCTGGACATTCCAAATAAAGAATAGGCCC...TGTTTGAACCCTGGACATTCCAAATAAAGAATAGGCCCCTGCCTGGCTCCTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324689.8
ENST00000328381.10
ENST00000535306.6
CDS-3UTR CAA 90 bp AGGAGGCAGAGATGGTACACTCATACAGAAGCTTCTCCTGATTGTCCACTGAATCAGAGAACCCTGCATTaGTGCTTCAGGAGCCTCTTT +
Preference number: 5 (lower is better)
Translates to: RRQRWYTHTEASPDCPLNQRTLH*CFRSLF
Trigger: AAAGAGGCTCCTGAAGCACAAATGCAGGGTTCTCTG...ATTCAGTGGACAATCAGGAGAAGCTTCTGTATGAGTGTACCATCTCTGCCTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535306.6
CDS-3UTR CAA 90 bp GTTCATCCTGTATCACACAAAAGGATTAACTTCAAAAGTGGTATTCTTGGCCAGACTGTACGGGAATCCTaGGACACCTCCAGGCTGCAG +
Preference number: 5 (lower is better)
Translates to: VHPVSHKRINFKSGILGQTVRES*DTSRLQ
Trigger: CTGCAGCCTGGAGGTGTCCAAGGATTCCCGTACAGT...CTGGCCAAGAATACCACTTTTGAAGTTAATCCTTTTGTGTGATACAGGATGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324689.8
ENST00000328381.10
ENST00000535306.6
CDS-3UTR CAA 90 bp AGAGAGACCAGGAAACCACTGTGTTGTAATCCCTTAGGAAACCTTACACCTTTACCAAGGACAGTTTCCTaGACCATGTGCCATGCAGAG +
Preference number: 5 (lower is better)
Translates to: RETRKPLCCNPLGNLTPLPRTVS*TMCHAE
Trigger: CTCTGCATGGCACATGGTCAAGGAAACTGTCCTTGG...TAAAGGTGTAAGGTTTCCTAAGGGATTACAACACAGTGGTTTCCTGGTCTCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324689.8
ENST00000443677.6
ENST00000535306.6
CDS-3UTR CAA 90 bp ATGCCTAGGTGTCCAGGGCTTTTACTAGGGATTGATCACATTGGCATGCTTCACGGGCCTATTCTTTATTaGGAATGTCCAGGGTTCAAA +
Preference number: 5 (lower is better)
Translates to: MPRCPGLLLGIDHIGMLHGPILY*ECPGFK
Trigger: TTTGAACCCTGGACATTCCAAATAAAGAATAGGCCC...GTGAAGCATGCCAATGTGATCAATCCCTAGTAAAAGCCCTGGACACCTAGGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324689.8
ENST00000328381.10
ENST00000535306.6
CDS-3UTR CAA 90 bp AGAGAGACCAGGAAACCACTGTGTTGTAATCCCTTAGGAAACCTTACACCTTTAAGGATGCTCAGTTCGTaGTCTGGTCCAGATTCTGAT +
Preference number: 5 (lower is better)
Translates to: RETRKPLCCNPLGNLTPLRMLSS*SGPDSD
Trigger: ATCAGAATCTGGACCAGACAACGAACTGAGCATCCT...TAAAGGTGTAAGGTTTCCTAAGGGATTACAACACAGTGGTTTCCTGGTCTCTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324689.8
ENST00000535306.6
CDS-3UTR CAA 90 bp GTTCATCCTGTATCACACAAAAGGATTAACTTCAAAAGTGGTATTCTTGGCCAGGAGTTCTCCCTGCATTaGTGCTTCAGGAGCCTCTTT +
Preference number: 5 (lower is better)
Translates to: VHPVSHKRINFKSGILGQEFSLH*CFRSLF
Trigger: AAAGAGGCTCCTGAAGCACAAATGCAGGGAGAACTC...CTGGCCAAGAATACCACTTTTGAAGTTAATCCTTTTGTGTGATACAGGATGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328381.10
CDS CCA 72 bp GTGTTCTTCCGCAGGTGCGGCTGCTGCGCGGCGCCCTaGCGGCAAGTGGGGCAGGCCCAGCGGCGGGCGTCG +
Preference number: 6 (lower is better)
Translates to: VFFRRCGCCAAP*RQVGQAQRRAS
Trigger: CGACGCCCGCCGCTGGGCCTGCCCCACTTGCCGCCAGGGCGCCGCGCAGCAGCCGCACCTGCGGAAGAACAC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324689.8
ENST00000328381.10
ENST00000443677.6
ENST00000535306.6
ENST00000580444.2
CDS TCA 72 bp ATGGCCAACAGGCGGCCGGGGCGCGGACGTCGGGGTTaGGCCGGGCGAGTCTCCTCAGGCTCCTCCCTCGCC +
Preference number: 6 (lower is better)
Translates to: MANRRPGRGRRG*AGRVSSGSSLA
Trigger: GGCGAGGGAGGAGCCTGAGGAGACTCGCCCGGCTCAACCCCGACGTCCGCGCCCCGGCCGCCTGTTGGCCAT
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443677.6
CDS CAA 72 bp CATGGCCAACAGGCGGCCGGGGCGCGGACGTCGGGGTaGAGCCGGGCGAGTCTCCTCAGGCTCCTCCCTCGC +
Preference number: 6 (lower is better)
Translates to: HGQQAAGARTSG*SRASLLRLLPR
Trigger: GCGAGGGAGGAGCCTGAGGAGACTCGCCCGGCTCAACCCCGACGTCCGCGCCCCGGCCGCCTGTTGGCCATG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443677.6
CDS CAA 90 bp CAGGCCCGCCATGGCCAACAGGCGGCCGGGGCGCGGACGTCGGGGTaGAGCCGGGCGAGTCTCCTCAGGCTCCTCCCTCGCCCTTCCTCT +
Preference number: 6 (lower is better)
Translates to: QARHGQQAAGARTSG*SRASLLRLLPRPSS
Trigger: AGAGGAAGGGCGAGGGAGGAGCCTGAGGAGACTCGCCCGGCTCAACCCCGACGTCCGCGCCCCGGCCGCCTGTTGGCCATGGCGGGCCTG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443677.6
CDS CCA 72 bp CCGCAGGGCAGCGTGGCGGGCCAGTCCAGCAGCCCCTaGCAGATGATGCAGCCGAGGTCGTCCTCGGCCAGC +
Preference number: 6 (lower is better)
Translates to: PQGSVAGQSSSP*QMMQPRSSSAS
Trigger: GCTGGCCGAGGACGACCTCGGCTGCATCATCTGCCAGGGGCTGCTGGACTGGCCCGCCACGCTGCCCTGCGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324689.8
ENST00000328381.10
ENST00000443677.6
ENST00000535306.6
CDS GCA 72 bp TCCTGCAGTAGCGTGTTCTTCCGCAGGTGCGGCTGCTaGGCGGCGCCCTGGCGGCAAGTGGGGCAGGCCCAG +
Preference number: 6 (lower is better)
Translates to: SCSSVFFRRCGC*AAPWRQVGQAQ
Trigger: CTGGGCCTGCCCCACTTGCCGCCAGGGCGCCGCGCAGCAGCCGCACCTGCGGAAGAACACGCTACTGCAGGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324689.8
ENST00000328381.10
ENST00000443677.6
ENST00000535306.6
ENST00000580444.2
CDS GCA 72 bp AGGTCCTGCAGTAGCGTGTTCTTCCGCAGGTGCGGCTaGTGCGCGGCGCCCTGGCGGCAAGTGGGGCAGGCC +
Preference number: 6 (lower is better)
Translates to: RSCSSVFFRRCG*CAAPWRQVGQA
Trigger: GGCCTGCCCCACTTGCCGCCAGGGCGCCGCGCAGCAGCCGCACCTGCGGAAGAACACGCTACTGCAGGACCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324689.8
ENST00000328381.10
ENST00000443677.6
ENST00000535306.6
ENST00000580444.2
CDS GCA 72 bp GCAGTGGGCAGGGTCGGAGCCCGCCTGTATCTCGCGTaGGGCGCGGCGGTACTTGTCGGCCAGGTCCTGCAG +
Preference number: 6 (lower is better)
Translates to: AVGRVGARLYLA*GAAVLVGQVLQ
Trigger: CTGCAGGACCTGGCCGACAAGTACCGCCGCGCCGCACGCGAGATACAGGCGGGCTCCGACCCTGCCCACTGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324689.8
ENST00000328381.10
ENST00000443677.6
ENST00000535306.6
ENST00000580444.2
CDS CAA 90 bp GCAGGGTCGGAGCCCGCCTGTATCTCGCGTGCGGCGCGGCGGTACTaGTCGGCCAGGTCCTGCAGTAGCGTGTTCTTCCGCAGGTGCGGC +
Preference number: 6 (lower is better)
Translates to: AGSEPACISRAARRY*SARSCSSVFFRRCG
Trigger: GCCGCACCTGCGGAAGAACACGCTACTGCAGGACCTGGCCGACAAGTACCGCCGCGCCGCACGCGAGATACAGGCGGGCTCCGACCCTGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324689.8
ENST00000328381.10
ENST00000443677.6
ENST00000535306.6
ENST00000580444.2
CDS GCA 72 bp TCGCGTGCGGCGCGGCGGTACTTGTCGGCCAGGTCCTaGAGTAGCGTGTTCTTCCGCAGGTGCGGCTGCTGC +
Preference number: 6 (lower is better)
Translates to: SRAARRYLSARS*SSVFFRRCGCC
Trigger: GCAGCAGCCGCACCTGCGGAAGAACACGCTACTGCAGGACCTGGCCGACAAGTACCGCCGCGCCGCACGCGA
69% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324689.8
ENST00000328381.10
ENST00000443677.6
ENST00000535306.6
ENST00000580444.2
CDS CAA 72 bp GAGCCCGCCTGTATCTCGCGTGCGGCGCGGCGGTACTaGTCGGCCAGGTCCTGCAGTAGCGTGTTCTTCCGC +
Preference number: 6 (lower is better)
Translates to: EPACISRAARRY*SARSCSSVFFR
Trigger: GCGGAAGAACACGCTACTGCAGGACCTGGCCGACAAGTACCGCCGCGCCGCACGCGAGATACAGGCGGGCTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324689.8
ENST00000328381.10
ENST00000443677.6
ENST00000535306.6
ENST00000580444.2
CDS TCA 72 bp GATGGATGGCCCACTGAGCAAACCGAGAAGCTCTCCTaGGTGCAGGGTGGCTCTGGTCAGGCAATGGGCATG +
Preference number: 6 (lower is better)
Translates to: DGWPTEQTEKLS*VQGGSGQAMGM
Trigger: CATGCCCATTGCCTGACCAGAGCCACCCTGCACTCAGGAGAGCTTCTCGGTTTGCTCAGTGGGCCATCCATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324689.8
ENST00000328381.10
ENST00000443677.6
ENST00000535306.6
CDS CCA 72 bp GTGGGCGGTGAGACACAGTCACTGTACGGGAATCCTTaGACACCTCCAGGCTGCAGGAAAGGCTCTTCAAGT +
Preference number: 6 (lower is better)
Translates to: VGGETQSLYGNP*TPPGCRKGSSS
Trigger: ACTTGAAGAGCCTTTCCTGCAGCCTGGAGGTGTCCAAGGATTCCCGTACAGTGACTGTGTCTCACCGCCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324689.8
ENST00000328381.10
ENST00000443677.6
ENST00000535306.6
CDS CCA 72 bp CTCCAGGCTGCAGGAAAGGCTCTTCAAGTTAAAGGTTaGATGGATGGCCCACTGAGCAAACCGAGAAGCTCT +
Preference number: 6 (lower is better)
Translates to: LQAAGKALQVKG*MDGPLSKPRSS
Trigger: AGAGCTTCTCGGTTTGCTCAGTGGGCCATCCATCCAACCTTTAACTTGAAGAGCCTTTCCTGCAGCCTGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324689.8
ENST00000328381.10
ENST00000443677.6
ENST00000535306.6
CDS CCA 72 bp GATTTTCCCTGCAGCTGTGTCGGAAGTCACCAGCTTTaGAGAAGCCATGGAAAGATCCACCCCAGAAGAAAA +
Preference number: 6 (lower is better)
Translates to: DFPCSCVGSHQL*RSHGKIHPRRK
Trigger: TTTTCTTCTGGGGTGGATCTTTCCATGGCTTCTCCAAAGCTGGTGACTTCCGACACAGCTGCAGGGAAAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328381.10
ENST00000535306.6
ENST00000580444.2
CDS TCA 72 bp CAGATTCTGATAGGGGCCTCTGATTCTGCAGGCTTCTaGCAATGTCTACAAGATGTTCCACCAGCTCTGTCA +
Preference number: 6 (lower is better)
Translates to: QILIGASDSAGF*QCLQDVPPALS
Trigger: TGACAGAGCTGGTGGAACATCTTGTAGACATTGTCAGAAGCCTGCAGAATCAGAGGCCCCTATCAGAATCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324689.8
ENST00000328381.10
ENST00000535306.6
CDS TCA 72 bp AGTTCGTTGTCTGGTCCAGATTCTGATAGGGGCCTCTaGTTCTGCAGGCTTCTGACAATGTCTACAAGATGT +
Preference number: 6 (lower is better)
Translates to: SSLSGPDSDRGL*FCRLLTMSTRC
Trigger: ACATCTTGTAGACATTGTCAGAAGCCTGCAGAATCAGAGGCCCCTATCAGAATCTGGACCAGACAACGAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324689.8
ENST00000328381.10
ENST00000535306.6