Pregenerated sensors for RNF133 (Homo sapiens)

Ensembl gene IDs: ENSG00000188050

Ensembl transcript IDs: ENST00000340112.3

Found 8 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS TCA 72 bp	AGGAAGAGGCAGTGTTGTTTCTCCAAGTGCCAACCTTaGGTAGATGCATCTCTCTCTTCTCCGAGTGACTTA	+
Preference number: 6 (lower is better) Translates to: RKRQCCFSKCQP*VDASLSSPSDL Trigger: TAAGTCACTCGGAGAAGAGAGAGATGCATCTACTCAAGGTTGGCACTTGGAGAAACAACACTGCCTCTTCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000340112.3
CDS TCA 72 bp	CCAACCTTGAGTAGATGCATCTCTCTCTTCTCCGAGTaGCTTAAGAACCAACCTAACAGTTGCACATCTGTT	+
Preference number: 6 (lower is better) Translates to: PTLSRCISLFSE*LKNQPNSCTSV Trigger: AACAGATGTGCAACTGTTAGGTTGGTTCTTAAGTCACTCGGAGAAGAGAGAGATGCATCTACTCAAGGTTGG 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000340112.3
CDS CAA 72 bp	GAAGTTGGAGTTGTCCAAATGTGTTCTGAAGATCTGTaGTTAATCGCTGCCATCTCCGGTTCTGAATCCTTG	+
Preference number: 6 (lower is better) Translates to: EVGVVQMCSEDL*LIAAISGSESL Trigger: CAAGGATTCAGAACCGGAGATGGCAGCGATTAACAACAGATCTTCAGAACACATTTGGACAACTCCAACTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000340112.3
CDS TCA 72 bp	TTTACTACTCGAAGTTGGAGTTGTCCAAATGTGTTCTaGAGATCTGTTGTTAATCGCTGCCATCTCCGGTTC	+
Preference number: 6 (lower is better) Translates to: FTTRSWSCPNVF*RSVVNRCHLRF Trigger: GAACCGGAGATGGCAGCGATTAACAACAGATCTTCAGAACACATTTGGACAACTCCAACTTCGAGTAGTAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000340112.3
CDS CCA 72 bp	ATTGGGATTACATGCATTTTGGATTTTTCCCTCTGGTaGCACTATAACTCCTGCCACTCTCTTCAAAGTGGA	+
Preference number: 6 (lower is better) Translates to: IGITCILDFSLW*HYNSCHSLQSG Trigger: TCCACTTTGAAGAGAGTGGCAGGAGTTATAGTGCCACCAGAGGGAAAAATCCAAAATGCATGTAATCCCAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000340112.3
CDS CCA 72 bp	GGTATTGGGATTACATGCATTTTGGATTTTTCCCTCTaGTGGCACTATAACTCCTGCCACTCTCTTCAAAGT	+
Preference number: 6 (lower is better) Translates to: GIGITCILDFSL*WHYNSCHSLQS Trigger: ACTTTGAAGAGAGTGGCAGGAGTTATAGTGCCACCAGAGGGAAAAATCCAAAATGCATGTAATCCCAATACC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000340112.3
CDS TCA 72 bp	AGAAGTAGGGTTCTCCTCCACATGGATTACTTTATCTaGGGTTCCTGCAGGAGAAACTTCATTATTTGTCTC	+
Preference number: 6 (lower is better) Translates to: RSRVLLHMDYFI*GSCRRNFIICL Trigger: GAGACAAATAATGAAGTTTCTCCTGCAGGAACCTCAGATAAAGTAATCCATGTGGAGGAGAACCCTACTTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000340112.3
CDS CAA 90 bp	TTACTACTCGAAGTTGGAGTTGTCCAAATGTGTTCTGAAGATCTGTaGTTAATCGCTGCCATCTCCGGTTCTGAATCCTTGCTAAACAAA	+
Preference number: 6 (lower is better) Translates to: LLLEVGVVQMCSEDL*LIAAISGSESLLNK Trigger: TTTGTTTAGCAAGGATTCAGAACCGGAGATGGCAGCGATTAACAACAGATCTTCAGAACACATTTGGACAACTCCAACTTCGAGTAGTAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000340112.3

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