Pregenerated sensors for RNF13 (Homo sapiens)
Ensembl gene IDs: ENSG00000082996Ensembl transcript IDs: ENST00000344229.7, ENST00000459632.5, ENST00000466478.5, ENST00000468648.5, ENST00000470151.5
Found 47 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | GGGACCGAGCGGGCAGGGCCGGTCGGTCTGATCTGCTCCGGCTGTTaGGACAGAGTAGCCCAAGATTCGGCTGCCGGGCTGCCCCCGGGC | + |
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Preference number: 5 (lower is better) Translates to: GTERAGPVGLICSGC*DRVAQDSAAGLPPG Trigger: GCCCGGGGGCAGCCCGGCAGCCGAATCTTGGGCTACTCTGTCCCAACAGCCGGAGCAGATCAGACCGACCGGCCCTGCCCGCTCGGTCCC 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000344229.7 |
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| CDS GCA 90 bp | TCTGGAGGGCGCGGGACCGAGCGGGCAGGGCCGGTCGGTCTGATCTaGTCCGGCTGTTGGGACAGAGTAGCCCAAGATTCGGCTGCCGGG | + |
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Preference number: 5 (lower is better) Translates to: SGGRGTERAGPVGLI*SGCWDRVAQDSAAG Trigger: CCCGGCAGCCGAATCTTGGGCTACTCTGTCCCAACAGCCGGAGCAGATCAGACCGACCGGCCCTGCCCGCTCGGTCCCGCGCCCTCCAGA 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000344229.7 |
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| CDS CCA 90 bp | GCCCAGTTTGCGAGTCTCGTTCTTGGCCGCGTGATCCGTCTTCCCTaGAAGGGAAGAGCAGGGTGGGGCAGGCGTCTGCGGAACTGGAGC | + |
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Preference number: 5 (lower is better) Translates to: AQFASLVLGRVIRLP*KGRAGWGRRLRNWS Trigger: GCTCCAGTTCCGCAGACGCCTGCCCCACCCTGCTCTTCCCTTCCAGGGAAGACGGATCACGCGGCCAAGAACGAGACTCGCAAACTGGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000344229.7 ENST00000470151.5 |
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| CDS TCA 90 bp | CGGCTCGGAGAAATGCCCAGTTTGCGAGTCTCGTTCTTGGCCGCGTaGTCCGTCTTCCCTGGAAGGGAAGAGCAGGGTGGGGCAGGCGTC | + |
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Preference number: 5 (lower is better) Translates to: RLGEMPSLRVSFLAA*SVFPGREEQGGAGV Trigger: GACGCCTGCCCCACCCTGCTCTTCCCTTCCAGGGAAGACGGATCACGCGGCCAAGAACGAGACTCGCAAACTGGGCATTTCTCCGAGCCG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000344229.7 ENST00000470151.5 |
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| CDS CCA 90 bp | TGCTCTTGGCAGAGGAAGGGGCAGGCTGGCAAAGTGGATTGGCTGTaGGCGCCTGCCGCTAACCATGTGCCCCTAGAAACGGAGACCGTA | + |
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Preference number: 5 (lower is better) Translates to: CSWQRKGQAGKVDWL*APAANHVPLETETV Trigger: TACGGTCTCCGTTTCTAGGGGCACATGGTTAGCGGCAGGCGCCCACAGCCAATCCACTTTGCCAGCCTGCCCCTTCCTCTGCCAAGAGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000344229.7 ENST00000470151.5 |
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| CDS CCA 90 bp | CGACAACACCTAGGCGAAGCGGAAGTCCCGCCCCACGCGCCTCATTaGTCCGCACCCAAAGGCACAGAAAACCCACTGGGCAACATGGTT | + |
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Preference number: 5 (lower is better) Translates to: RQHLGEAEVPPHAPH*SAPKGTENPLGNMV Trigger: AACCATGTTGCCCAGTGGGTTTTCTGTGCCTTTGGGTGCGGACCAATGAGGCGCGTGGGGCGGGACTTCCGCTTCGCCTAGGTGTTGTCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000344229.7 ENST00000466478.5 |
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| CDS CCA 90 bp | CCCACGCGCCTCATTGGTCCGCACCCAAAGGCACAGAAAACCCACTaGGCAACATGGTTGCCTGTTAAGGCTCTTTCCCACTCTCACGCG | + |
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Preference number: 5 (lower is better) Translates to: PTRLIGPHPKAQKTH*ATWLPVKALSHSHA Trigger: CGCGTGAGAGTGGGAAAGAGCCTTAACAGGCAACCATGTTGCCCAGTGGGTTTTCTGTGCCTTTGGGTGCGGACCAATGAGGCGCGTGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000344229.7 ENST00000466478.5 |
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| CDS GCA 90 bp | TGCCTGTTAAGGCTCTTTCCCACTCTCACGCGGAGTCTCGCTACTTaGTCTAGCCCGGCTCGGAGAAATGCCCAGTTTGCGAGTCTCGTT | + |
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Preference number: 5 (lower is better) Translates to: CLLRLFPTLTRSLAT*SSPARRNAQFASLV Trigger: AACGAGACTCGCAAACTGGGCATTTCTCCGAGCCGGGCTAGAGCAAGTAGCGAGACTCCGCGTGAGAGTGGGAAAGAGCCTTAACAGGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000344229.7 ENST00000466478.5 ENST00000470151.5 |
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| CDS CCA 90 bp | CTCATTGGTCCGCACCCAAAGGCACAGAAAACCCACTGGGCAACATaGTTGCCTGTTAAGGCTCTTTCCCACTCTCACGCGGAGTCTCGC | + |
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Preference number: 5 (lower is better) Translates to: LIGPHPKAQKTHWAT*LPVKALSHSHAESR Trigger: GCGAGACTCCGCGTGAGAGTGGGAAAGAGCCTTAACAGGCAACCATGTTGCCCAGTGGGTTTTCTGTGCCTTTGGGTGCGGACCAATGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000344229.7 ENST00000466478.5 |
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| CDS GCA 90 bp | ACACTGGCAGAGAAAACTGAGTGGCCGCCACCAAAGTTGCATGAGTaGTTCCGGGATACTGCTGTTTGGCTTCGATGTCTGCCCACTCTC | + |
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Preference number: 5 (lower is better) Translates to: TLAEKTEWPPPKLHE*FRDTAVWLRCLPTL Trigger: GAGAGTGGGCAGACATCGAAGCCAAACAGCAGTATCCCGGAAGCACTCATGCAACTTTGGTGGCGGCCACTCAGTTTTCTCTGCCAGTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000344229.7 ENST00000459632.5 ENST00000468648.5 ENST00000470151.5 |
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| CDS CCA 90 bp | TGGCCGCCACCAAAGTTGCATGAGTGCTTCCGGGATACTGCTGTTTaGCTTCGATGTCTGCCCACTCTCTCTTTCTCTCCAAAGGCACAG | + |
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Preference number: 5 (lower is better) Translates to: WPPPKLHECFRDTAV*LRCLPTLSFSPKAQ Trigger: CTGTGCCTTTGGAGAGAAAGAGAGAGTGGGCAGACATCGAAGCCAAACAGCAGTATCCCGGAAGCACTCATGCAACTTTGGTGGCGGCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000470151.5 |
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| CDS GCA 90 bp | ATCACCAGACACTGGCAGAGAAAACTGAGTGGCCGCCACCAAAGTTaGATGAGTGCTTCCGGGATACTGCTGTTTGGCTTCGATGTCTGC | + |
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Preference number: 5 (lower is better) Translates to: ITRHWQRKLSGRHQS*MSASGILLFGFDVC Trigger: GCAGACATCGAAGCCAAACAGCAGTATCCCGGAAGCACTCATGCAACTTTGGTGGCGGCCACTCAGTTTTCTCTGCCAGTGTCTGGTGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000344229.7 ENST00000468648.5 ENST00000470151.5 |
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| CDS CCA 90 bp | TGGCCGCCACCAAAGTTGCATGAGTGCTTCCGGGATACTGCTGTTTaGCTTCGATGTCTGCCCACTCTCTCTTTCTCTCTGGGACAAAGT | + |
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Preference number: 5 (lower is better) Translates to: WPPPKLHECFRDTAV*LRCLPTLSFSLGQS Trigger: ACTTTGTCCCAGAGAGAAAGAGAGAGTGGGCAGACATCGAAGCCAAACAGCAGTATCCCGGAAGCACTCATGCAACTTTGGTGGCGGCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000459632.5 ENST00000468648.5 |
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| CDS CCA 90 bp | ACTCTCTCTTTCTCTCCAAAGGCACAGAAAACCCACTGGGCAACATaGTTGCCTGTTAAGGCTCTTTCCCACTCTCACGCGGAGTCTCGC | + |
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Preference number: 5 (lower is better) Translates to: TLSFSPKAQKTHWAT*LPVKALSHSHAESR Trigger: GCGAGACTCCGCGTGAGAGTGGGAAAGAGCCTTAACAGGCAACCATGTTGCCCAGTGGGTTTTCTGTGCCTTTGGAGAGAAAGAGAGAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000470151.5 |
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| CDS GCA 90 bp | TTTACCAGACACTGGCAGAGAAAACTGAGTGGCCGCCACCAAAGTTaGATGAGTGCTTCCGGGATACTGCTGTTTGGCTTCGATGTCTGC | + |
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Preference number: 5 (lower is better) Translates to: FTRHWQRKLSGRHQS*MSASGILLFGFDVC Trigger: GCAGACATCGAAGCCAAACAGCAGTATCCCGGAAGCACTCATGCAACTTTGGTGGCGGCCACTCAGTTTTCTCTGCCAGTGTCTGGTAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000459632.5 |
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| CDS CCA 90 bp | GGACAAAATAGAGGAATTTACCAGACACTGGCAGAGAAAACTGAGTaGCCGCCACCAAAGTTGCATGAGTGCTTCCGGGATACTGCTGTT | + |
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Preference number: 5 (lower is better) Translates to: GQNRGIYQTLAEKTE*PPPKLHECFRDTAV Trigger: AACAGCAGTATCCCGGAAGCACTCATGCAACTTTGGTGGCGGCCACTCAGTTTTCTCTGCCAGTGTCTGGTAAATTCCTCTATTTTGTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000459632.5 |
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| CDS TCA 90 bp | TTGTTGAAAGGAATGCATCAGTTTTCACTGTTTCTGCTGCATCACTaGCGAACAGTAATAGCCGGGCAGGTTTGGGGCAACAAGAGAGGA | + |
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Preference number: 5 (lower is better) Translates to: LLKGMHQFSLFLLHH*RTVIAGQVWGNKRG Trigger: TCCTCTCTTGTTGCCCCAAACCTGCCCGGCTATTACTGTTCGTCAGTGATGCAGCAGAAACAGTGAAAACTGATGCATTCCTTTCAACAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000459632.5 |
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| CDS CAA 90 bp | CGGGACCGAGCGGGCAGGGCCGGTCGGTCTGATCTGCTCCGGCTGTaGGGACAGAGTAGCCCAAGATTCGGCTGCCGGGCTGCCCCCGGG | + |
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Preference number: 6 (lower is better) Translates to: RDRAGRAGRSDLLRL*GQSSPRFGCRAAPG Trigger: CCCGGGGGCAGCCCGGCAGCCGAATCTTGGGCTACTCTGTCCCAACAGCCGGAGCAGATCAGACCGACCGGCCCTGCCCGCTCGGTCCCG 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000344229.7 |
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| CDS GCA 72 bp | CGCGGGACCGAGCGGGCAGGGCCGGTCGGTCTGATCTaGTCCGGCTGTTGGGACAGAGTAGCCCAAGATTCG | + |
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Preference number: 6 (lower is better) Translates to: RGTERAGPVGLI*SGCWDRVAQDS Trigger: CGAATCTTGGGCTACTCTGTCCCAACAGCCGGAGCAGATCAGACCGACCGGCCCTGCCCGCTCGGTCCCGCG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000344229.7 |
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| CDS CCA 72 bp | CGGGCAGGGCCGGTCGGTCTGATCTGCTCCGGCTGTTaGGACAGAGTAGCCCAAGATTCGGCTGCCGGGCTG | + |
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Preference number: 6 (lower is better) Translates to: RAGPVGLICSGC*DRVAQDSAAGL Trigger: CAGCCCGGCAGCCGAATCTTGGGCTACTCTGTCCCAACAGCCGGAGCAGATCAGACCGACCGGCCCTGCCCG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000344229.7 |
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| CDS CAA 72 bp | GCGGGCAGGGCCGGTCGGTCTGATCTGCTCCGGCTGTaGGGACAGAGTAGCCCAAGATTCGGCTGCCGGGCT | + |
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Preference number: 6 (lower is better) Translates to: AGRAGRSDLLRL*GQSSPRFGCRA Trigger: AGCCCGGCAGCCGAATCTTGGGCTACTCTGTCCCAACAGCCGGAGCAGATCAGACCGACCGGCCCTGCCCGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000344229.7 |
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| CDS CCA 72 bp | CTAGGCGAAGCGGAAGTCCCGCCCCACGCGCCTCATTaGTCCGCACCCAAAGGCACAGAAAACCCACTGGGC | + |
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Preference number: 6 (lower is better) Translates to: LGEAEVPPHAPH*SAPKGTENPLG Trigger: GCCCAGTGGGTTTTCTGTGCCTTTGGGTGCGGACCAATGAGGCGCGTGGGGCGGGACTTCCGCTTCGCCTAG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000344229.7 ENST00000466478.5 |
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| CDS CAA 72 bp | CCTAGGCGAAGCGGAAGTCCCGCCCCACGCGCCTCATaGGTCCGCACCCAAAGGCACAGAAAACCCACTGGG | + |
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Preference number: 6 (lower is better) Translates to: PRRSGSPAPRAS*VRTQRHRKPTG Trigger: CCCAGTGGGTTTTCTGTGCCTTTGGGTGCGGACCAATGAGGCGCGTGGGGCGGGACTTCCGCTTCGCCTAGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000344229.7 ENST00000466478.5 |
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| CDS CCA 72 bp | CAGAGGAAGGGGCAGGCTGGCAAAGTGGATTGGCTGTaGGCGCCTGCCGCTAACCATGTGCCCCTAGAAACG | + |
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Preference number: 6 (lower is better) Translates to: QRKGQAGKVDWL*APAANHVPLET Trigger: CGTTTCTAGGGGCACATGGTTAGCGGCAGGCGCCCACAGCCAATCCACTTTGCCAGCCTGCCCCTTCCTCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000344229.7 ENST00000470151.5 |
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| CDS CCA 72 bp | TCTTGGCAGAGGAAGGGGCAGGCTGGCAAAGTGGATTaGCTGTGGGCGCCTGCCGCTAACCATGTGCCCCTA | + |
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Preference number: 6 (lower is better) Translates to: SWQRKGQAGKVD*LWAPAANHVPL Trigger: TAGGGGCACATGGTTAGCGGCAGGCGCCCACAGCCAATCCACTTTGCCAGCCTGCCCCTTCCTCTGCCAAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000344229.7 ENST00000470151.5 |
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| CDS CAA 90 bp | ACGACAACACCTAGGCGAAGCGGAAGTCCCGCCCCACGCGCCTCATaGGTCCGCACCCAAAGGCACAGAAAACCCACTGGGCAACATGGT | + |
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Preference number: 6 (lower is better) Translates to: TTTPRRSGSPAPRAS*VRTQRHRKPTGQHG Trigger: ACCATGTTGCCCAGTGGGTTTTCTGTGCCTTTGGGTGCGGACCAATGAGGCGCGTGGGGCGGGACTTCCGCTTCGCCTAGGTGTTGTCGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000344229.7 ENST00000466478.5 |
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| CDS TCA 72 bp | GAAATGCCCAGTTTGCGAGTCTCGTTCTTGGCCGCGTaGTCCGTCTTCCCTGGAAGGGAAGAGCAGGGTGGG | + |
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Preference number: 6 (lower is better) Translates to: EMPSLRVSFLAA*SVFPGREEQGG Trigger: CCCACCCTGCTCTTCCCTTCCAGGGAAGACGGATCACGCGGCCAAGAACGAGACTCGCAAACTGGGCATTTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000344229.7 ENST00000470151.5 |
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| CDS GCA 72 bp | AGGCTCTTTCCCACTCTCACGCGGAGTCTCGCTACTTaGTCTAGCCCGGCTCGGAGAAATGCCCAGTTTGCG | + |
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Preference number: 6 (lower is better) Translates to: RLFPTLTRSLAT*SSPARRNAQFA Trigger: CGCAAACTGGGCATTTCTCCGAGCCGGGCTAGAGCAAGTAGCGAGACTCCGCGTGAGAGTGGGAAAGAGCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000344229.7 ENST00000466478.5 ENST00000470151.5 |
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| CDS CAA 72 bp | GCTGCATCACTGACGAACAGTAATAGCCGGGCAGGTTaGGGGCAACAAGAGAGGACCCGAGCAGCTGCCCAC | + |
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Preference number: 6 (lower is better) Translates to: AASLTNSNSRAG*GQQERTRAAAH Trigger: GTGGGCAGCTGCTCGGGTCCTCTCTTGTTGCCCCAAACCTGCCCGGCTATTACTGTTCGTCAGTGATGCAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000459632.5 |
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| CDS CAA 90 bp | ACTGTTTCTGCTGCATCACTGACGAACAGTAATAGCCGGGCAGGTTaGGGGCAACAAGAGAGGACCCGAGCAGCTGCCCACGGTGCTGAA | + |
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Preference number: 6 (lower is better) Translates to: TVSAASLTNSNSRAG*GQQERTRAAAHGAE Trigger: TTCAGCACCGTGGGCAGCTGCTCGGGTCCTCTCTTGTTGCCCCAAACCTGCCCGGCTATTACTGTTCGTCAGTGATGCAGCAGAAACAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000459632.5 |
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| CDS CCA 72 bp | CCGCACCCAAAGGCACAGAAAACCCACTGGGCAACATaGTTGCCTGTTAAGGCTCTTTCCCACTCTCACGCG | + |
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Preference number: 6 (lower is better) Translates to: PHPKAQKTHWAT*LPVKALSHSHA Trigger: CGCGTGAGAGTGGGAAAGAGCCTTAACAGGCAACCATGTTGCCCAGTGGGTTTTCTGTGCCTTTGGGTGCGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000344229.7 ENST00000466478.5 |
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| CDS CAA 90 bp | ATTGGTCCGCACCCAAAGGCACAGAAAACCCACTGGGCAACATGGTaGCCTGTTAAGGCTCTTTCCCACTCTCACGCGGAGTCTCGCTAC | + |
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Preference number: 6 (lower is better) Translates to: IGPHPKAQKTHWATW*PVKALSHSHAESRY Trigger: GTAGCGAGACTCCGCGTGAGAGTGGGAAAGAGCCTTAACAGGCAACCATGTTGCCCAGTGGGTTTTCTGTGCCTTTGGGTGCGGACCAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000344229.7 ENST00000466478.5 |
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| CDS CAA 72 bp | CACCCAAAGGCACAGAAAACCCACTGGGCAACATGGTaGCCTGTTAAGGCTCTTTCCCACTCTCACGCGGAG | + |
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Preference number: 6 (lower is better) Translates to: HPKAQKTHWATW*PVKALSHSHAE Trigger: CTCCGCGTGAGAGTGGGAAAGAGCCTTAACAGGCAACCATGTTGCCCAGTGGGTTTTCTGTGCCTTTGGGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000344229.7 ENST00000466478.5 |
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| CDS GCA 72 bp | CACTGGCAGAGAAAACTGAGTGGCCGCCACCAAAGTTaGATGAGTGCTTCCGGGATACTGCTGTTTGGCTTC | + |
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Preference number: 6 (lower is better) Translates to: HWQRKLSGRHQS*MSASGILLFGF Trigger: GAAGCCAAACAGCAGTATCCCGGAAGCACTCATGCAACTTTGGTGGCGGCCACTCAGTTTTCTCTGCCAGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000344229.7 ENST00000459632.5 ENST00000468648.5 ENST00000470151.5 |
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| CDS CCA 72 bp | CTCATTGGTCCGCACCCAAAGGCACAGAAAACCCACTaGGCAACATGGTTGCCTGTTAAGGCTCTTTCCCAC | + |
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Preference number: 6 (lower is better) Translates to: LIGPHPKAQKTH*ATWLPVKALSH Trigger: GTGGGAAAGAGCCTTAACAGGCAACCATGTTGCCCAGTGGGTTTTCTGTGCCTTTGGGTGCGGACCAATGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000344229.7 ENST00000466478.5 |
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| CDS CAA 72 bp | TCTCCAAAGGCACAGAAAACCCACTGGGCAACATGGTaGCCTGTTAAGGCTCTTTCCCACTCTCACGCGGAG | + |
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Preference number: 6 (lower is better) Translates to: SPKAQKTHWATW*PVKALSHSHAE Trigger: CTCCGCGTGAGAGTGGGAAAGAGCCTTAACAGGCAACCATGTTGCCCAGTGGGTTTTCTGTGCCTTTGGAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000470151.5 |
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| CDS CAA 90 bp | CTCTCTTTCTCTCCAAAGGCACAGAAAACCCACTGGGCAACATGGTaGCCTGTTAAGGCTCTTTCCCACTCTCACGCGGAGTCTCGCTAC | + |
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Preference number: 6 (lower is better) Translates to: LSFSPKAQKTHWATW*PVKALSHSHAESRY Trigger: GTAGCGAGACTCCGCGTGAGAGTGGGAAAGAGCCTTAACAGGCAACCATGTTGCCCAGTGGGTTTTCTGTGCCTTTGGAGAGAAAGAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000470151.5 |
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| CDS GCA 72 bp | GAGAAAACTGAGTGGCCGCCACCAAAGTTGCATGAGTaGTTCCGGGATACTGCTGTTTGGCTTCGATGTCTG | + |
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Preference number: 6 (lower is better) Translates to: EKTEWPPPKLHE*FRDTAVWLRCL Trigger: CAGACATCGAAGCCAAACAGCAGTATCCCGGAAGCACTCATGCAACTTTGGTGGCGGCCACTCAGTTTTCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000344229.7 ENST00000459632.5 ENST00000468648.5 ENST00000470151.5 |
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| CDS CCA 72 bp | TTCTCTCCAAAGGCACAGAAAACCCACTGGGCAACATaGTTGCCTGTTAAGGCTCTTTCCCACTCTCACGCG | + |
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Preference number: 6 (lower is better) Translates to: FSPKAQKTHWAT*LPVKALSHSHA Trigger: CGCGTGAGAGTGGGAAAGAGCCTTAACAGGCAACCATGTTGCCCAGTGGGTTTTCTGTGCCTTTGGAGAGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000470151.5 |
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| CDS CAA 72 bp | ACACTGGCAGAGAAAACTGAGTGGCCGCCACCAAAGTaGCATGAGTGCTTCCGGGATACTGCTGTTTGGCTT | + |
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Preference number: 6 (lower is better) Translates to: TLAEKTEWPPPK*HECFRDTAVWL Trigger: AAGCCAAACAGCAGTATCCCGGAAGCACTCATGCAACTTTGGTGGCGGCCACTCAGTTTTCTCTGCCAGTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000344229.7 ENST00000459632.5 ENST00000468648.5 ENST00000470151.5 |
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| CDS CAA 90 bp | AATCACCAGACACTGGCAGAGAAAACTGAGTGGCCGCCACCAAAGTaGCATGAGTGCTTCCGGGATACTGCTGTTTGGCTTCGATGTCTG | + |
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Preference number: 6 (lower is better) Translates to: NHQTLAEKTEWPPPK*HECFRDTAVWLRCL Trigger: CAGACATCGAAGCCAAACAGCAGTATCCCGGAAGCACTCATGCAACTTTGGTGGCGGCCACTCAGTTTTCTCTGCCAGTGTCTGGTGATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000344229.7 ENST00000468648.5 ENST00000470151.5 |
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| CDS CAA 90 bp | ATTTACCAGACACTGGCAGAGAAAACTGAGTGGCCGCCACCAAAGTaGCATGAGTGCTTCCGGGATACTGCTGTTTGGCTTCGATGTCTG | + |
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Preference number: 6 (lower is better) Translates to: IYQTLAEKTEWPPPK*HECFRDTAVWLRCL Trigger: CAGACATCGAAGCCAAACAGCAGTATCCCGGAAGCACTCATGCAACTTTGGTGGCGGCCACTCAGTTTTCTCTGCCAGTGTCTGGTAAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000459632.5 |
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| CDS CCA 72 bp | CCAAAGTTGCATGAGTGCTTCCGGGATACTGCTGTTTaGCTTCGATGTCTGCCCACTCTCTCTTTCTCTCTG | + |
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Preference number: 6 (lower is better) Translates to: PKLHECFRDTAV*LRCLPTLSFSL Trigger: CAGAGAGAAAGAGAGAGTGGGCAGACATCGAAGCCAAACAGCAGTATCCCGGAAGCACTCATGCAACTTTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000459632.5 ENST00000468648.5 |
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| CDS CCA 72 bp | AGAGGAATTTACCAGACACTGGCAGAGAAAACTGAGTaGCCGCCACCAAAGTTGCATGAGTGCTTCCGGGAT | + |
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Preference number: 6 (lower is better) Translates to: RGIYQTLAEKTE*PPPKLHECFRD Trigger: ATCCCGGAAGCACTCATGCAACTTTGGTGGCGGCCACTCAGTTTTCTCTGCCAGTGTCTGGTAAATTCCTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000459632.5 |
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| CDS TCA 72 bp | GGAATGCATCAGTTTTCACTGTTTCTGCTGCATCACTaGCGAACAGTAATAGCCGGGCAGGTTTGGGGCAAC | + |
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Preference number: 6 (lower is better) Translates to: GMHQFSLFLLHH*RTVIAGQVWGN Trigger: GTTGCCCCAAACCTGCCCGGCTATTACTGTTCGTCAGTGATGCAGCAGAAACAGTGAAAACTGATGCATTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000459632.5 |
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| CDS GCA 72 bp | AGTGCTTCCGGGATACTGCTGTTTGGCTTCGATGTCTaGCCACTCTCTCTTTCTCTCTGGGACAAAGTTATT | + |
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Preference number: 6 (lower is better) Translates to: SASGILLFGFDV*PLSLSLWDKVI Trigger: AATAACTTTGTCCCAGAGAGAAAGAGAGAGTGGGCAGACATCGAAGCCAAACAGCAGTATCCCGGAAGCACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000459632.5 ENST00000468648.5 |
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| CDS CAA 90 bp | TGTATCAAAAACTGCAGATGTTCTCCTTGGAGAACAAACACATCATaGTTGAAAGGAATGCATCAGTTTTCACTGTTTCTGCTGCATCAC | + |
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Preference number: 6 (lower is better) Translates to: CIKNCRCSPWRTNTS*LKGMHQFSLFLLHH Trigger: GTGATGCAGCAGAAACAGTGAAAACTGATGCATTCCTTTCAACAATGATGTGTTTGTTCTCCAAGGAGAACATCTGCAGTTTTTGATACA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000459632.5 |
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