Pregenerated sensors for RNF128 (Homo sapiens)
Ensembl gene IDs: ENSG00000133135Ensembl transcript IDs: ENST00000255499.3, ENST00000324342.7, ENST00000418562.5
Found 47 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TTTGCATTGCTTTTTACATTACAATTCCAGATCAATATAAGCACCTaGAGAAAAACCCTGACACATGTAGCCCAAGCTAAAGAAGTAGTA | + |
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Preference number: 1 (lower is better) Translates to: FALLFTLQFQINIST*RKTLTHVAQAKEVV Trigger: TACTACTTCTTTAGCTTGGGCTACATGTGTCAGGGTTTTTCTCCAGGTGCTTATATTGATCTGGAATTGTAATGTAAAAAGCAATGCAAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000255499.3 ENST00000324342.7 |
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| 3UTR CCA 72 bp | CTTTTTACATTACAATTCCAGATCAATATAAGCACCTaGAGAAAAACCCTGACACATGTAGCCCAAGCTAAA | + |
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Preference number: 3 (lower is better) Translates to: LFTLQFQINIST*RKTLTHVAQAK Trigger: TTTAGCTTGGGCTACATGTGTCAGGGTTTTTCTCCAGGTGCTTATATTGATCTGGAATTGTAATGTAAAAAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000255499.3 ENST00000324342.7 |
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| CDS CCA 90 bp | GCTCCGCAGTTCCCTAGCGCCCCTGGCACGCGCCCTCCTAGCGCTTaGCAGGACCCTGGTCTTGAGCAGGTGCGCGCCAGGTGGGGAAGG | + |
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Preference number: 5 (lower is better) Translates to: APQFPSAPGTRPPSA*QDPGLEQVRARWGR Trigger: CCTTCCCCACCTGGCGCGCACCTGCTCAAGACCAGGGTCCTGCCAAGCGCTAGGAGGGCGCGTGCCAGGGGCGCTAGGGAACTGCGGAGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000255499.3 |
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| CDS GCA 90 bp | CCGGGAACCGGGTGCCTGCGGACTCAGGGCCAGCAGGAAGCACCATaGCAGCAATCTGGAAAAGCCGCAGCCACCGCGGCAGGAGACCCC | + |
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Preference number: 5 (lower is better) Translates to: PGTGCLRTQGQQEAP*QQSGKAAATAAGDP Trigger: GGGGTCTCCTGCCGCGGTGGCTGCGGCTTTTCCAGATTGCTGGCATGGTGCTTCCTGCTGGCCCTGAGTCCGCAGGCACCCGGTTCCCGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000255499.3 |
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| CDS GCA 90 bp | CAGGTGCGCGCCAGGTGGGGAAGGAATGGAGTGAGACTGGGGAGCTaGGAGCTACGTCGGAGCCAGGAGGCACGTAGCGTCAGCACACAG | + |
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Preference number: 5 (lower is better) Translates to: QVRARWGRNGVRLGS*ELRRSQEARSVSTQ Trigger: CTGTGTGCTGACGCTACGTGCCTCCTGGCTCCGACGTAGCTCGCAGCTCCCCAGTCTCACTCCATTCCTTCCCCACCTGGCGCGCACCTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000255499.3 |
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| CDS GCA 90 bp | ACGCCCTCCTCGCTCAGCTCCCACACCGTACGGTTCACTCCCGTGTaGGGAACCCGCCAGGACACGTTGAGGTACGCGGTCCACACTGCT | + |
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Preference number: 5 (lower is better) Translates to: TPSSLSSHTVRFTPV*GTRQDTLRYAVHTA Trigger: AGCAGTGTGGACCGCGTACCTCAACGTGTCCTGGCGGGTTCCGCACACGGGAGTGAACCGTACGGTGTGGGAGCTGAGCGAGGAGGGCGT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000255499.3 |
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| CDS CCA 90 bp | CCTAGCGCTTGGCAGGACCCTGGTCTTGAGCAGGTGCGCGCCAGGTaGGGAAGGAATGGAGTGAGACTGGGGAGCTGCGAGCTACGTCGG | + |
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Preference number: 5 (lower is better) Translates to: PSAWQDPGLEQVRAR*GRNGVRLGSCELRR Trigger: CCGACGTAGCTCGCAGCTCCCCAGTCTCACTCCATTCCTTCCCCACCTGGCGCGCACCTGCTCAAGACCAGGGTCCTGCCAAGCGCTAGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000255499.3 |
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| CDS TCA 90 bp | ACCCTGGTCTTGAGCAGGTGCGCGCCAGGTGGGGAAGGAATGGAGTaGGACTGGGGAGCTGCGAGCTACGTCGGAGCCAGGAGGCACGTA | + |
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Preference number: 5 (lower is better) Translates to: TLVLSRCAPGGEGME*DWGAASYVGARRHV Trigger: TACGTGCCTCCTGGCTCCGACGTAGCTCGCAGCTCCCCAGTCTCACTCCATTCCTTCCCCACCTGGCGCGCACCTGCTCAAGACCAGGGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000255499.3 |
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| CDS GCA 90 bp | AAGGTGCAGCCCCCGCCGCGTTGGATGAGGGCCAACCAAGAGACTTaGACGGTGCTTCCCCAAACCGTGGGCACCGTGAAATTCGTGTGC | + |
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Preference number: 5 (lower is better) Translates to: KVQPPPRWMRANQET*TVLPQTVGTVKFVC Trigger: GCACACGAATTTCACGGTGCCCACGGTTTGGGGAAGCACCGTGCAAGTCTCTTGGTTGGCCCTCATCCAACGCGGCGGGGGCTGCACCTT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000255499.3 |
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| CDS GCA 90 bp | GACGGCTCCAGACGCCCCTCTCTCATAAGCCAGATGGATCTTGTCTaGGAAGGTGCAGCCCCCGCCGCGTTGGATGAGGGCCAACCAAGA | + |
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Preference number: 5 (lower is better) Translates to: DGSRRPSLISQMDLV*EGAAPAALDEGQPR Trigger: TCTTGGTTGGCCCTCATCCAACGCGGCGGGGGCTGCACCTTCGCAGACAAGATCCATCTGGCTTATGAGAGAGGGGCGTCTGGAGCCGTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000255499.3 |
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| CDS CCA 90 bp | TACTGCACCAAAATTTGCCATCTGTATCGTCTGATTGCCAGTCTCTaGAGCATTGTAAATCACAACAGCATCAGCATTTCTTCTGCCCGC | + |
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Preference number: 5 (lower is better) Translates to: YCTKICHLYRLIASL*SIVNHNSISISSAR Trigger: GCGGGCAGAAGAAATGCTGATGCTGTTGTGATTTACAATGCTCCAGAGACTGGCAATCAGACGATACAGATGGCAAATTTTGGTGCAGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000324342.7 ENST00000418562.5 |
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| CDS CCA 90 bp | TCGAACAGCAGTCTCTTGATTAGGAGTTTCGTCTTCTTCAAAGGTTaGGTTGTCAACATGAGGAATAACATCCACTGCCACAGAATTTGC | + |
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Preference number: 5 (lower is better) Translates to: SNSSLLIRSFVFFKG*VVNMRNNIHCHRIC Trigger: GCAAATTCTGTGGCAGTGGATGTTATTCCTCATGTTGACAACCCAACCTTTGAAGAAGACGAAACTCCTAATCAAGAGACTGCTGTTCGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000255499.3 ENST00000324342.7 |
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| CDS GCA 90 bp | CTAATCCATAAACGCCACATTCACATGTCTCTATTGCAGTGTAGTTaGTGGTTTCATTGTAATAAGTCACAGTCACATAGGCACTCATTG | + |
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Preference number: 5 (lower is better) Translates to: LIHKRHIHMSLLQCS*WFHCNKSQSHRHSL Trigger: CAATGAGTGCCTATGTGACTGTGACTTATTACAATGAAACCAGCAACTACACTGCAATAGAGACATGTGAATGTGGCGTTTATGGATTAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000324342.7 ENST00000418562.5 |
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| CDS CCA 90 bp | ATCCATAAACGCCACATTCACATGTCTCTATTGCAGTGTAGTTGCTaGTTTCATTGTAATAAGTCACAGTCACATAGGCACTCATTGAAA | + |
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Preference number: 5 (lower is better) Translates to: IHKRHIHMSLLQCSC*FHCNKSQSHRHSLK Trigger: TTTCAATGAGTGCCTATGTGACTGTGACTTATTACAATGAAACCAGCAACTACACTGCAATAGAGACATGTGAATGTGGCGTTTATGGAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000324342.7 ENST00000418562.5 |
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| CDS CCA 72 bp | TTCCCTAGCGCCCCTGGCACGCGCCCTCCTAGCGCTTaGCAGGACCCTGGTCTTGAGCAGGTGCGCGCCAGG | + |
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Preference number: 6 (lower is better) Translates to: FPSAPGTRPPSA*QDPGLEQVRAR Trigger: CCTGGCGCGCACCTGCTCAAGACCAGGGTCCTGCCAAGCGCTAGGAGGGCGCGTGCCAGGGGCGCTAGGGAA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000255499.3 |
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| CDS CAA 72 bp | GCACGCGCCCTCCTAGCGCTTGGCAGGACCCTGGTCTaGAGCAGGTGCGCGCCAGGTGGGGAAGGAATGGAG | + |
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Preference number: 6 (lower is better) Translates to: ARALLALGRTLV*SRCAPGGEGME Trigger: CTCCATTCCTTCCCCACCTGGCGCGCACCTGCTCAAGACCAGGGTCCTGCCAAGCGCTAGGAGGGCGCGTGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000255499.3 |
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| CDS GCA 72 bp | GGGTGCCTGCGGACTCAGGGCCAGCAGGAAGCACCATaGCAGCAATCTGGAAAAGCCGCAGCCACCGCGGCA | + |
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Preference number: 6 (lower is better) Translates to: GCLRTQGQQEAP*QQSGKAAATAA Trigger: TGCCGCGGTGGCTGCGGCTTTTCCAGATTGCTGGCATGGTGCTTCCTGCTGGCCCTGAGTCCGCAGGCACCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000255499.3 |
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| CDS TCA 72 bp | TTGAGCAGGTGCGCGCCAGGTGGGGAAGGAATGGAGTaGGACTGGGGAGCTGCGAGCTACGTCGGAGCCAGG | + |
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Preference number: 6 (lower is better) Translates to: LSRCAPGGEGME*DWGAASYVGAR Trigger: CCTGGCTCCGACGTAGCTCGCAGCTCCCCAGTCTCACTCCATTCCTTCCCCACCTGGCGCGCACCTGCTCAA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000255499.3 |
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| CDS GCA 72 bp | TCGCTCAGCTCCCACACCGTACGGTTCACTCCCGTGTaGGGAACCCGCCAGGACACGTTGAGGTACGCGGTC | + |
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Preference number: 6 (lower is better) Translates to: SLSSHTVRFTPV*GTRQDTLRYAV Trigger: GACCGCGTACCTCAACGTGTCCTGGCGGGTTCCGCACACGGGAGTGAACCGTACGGTGTGGGAGCTGAGCGA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000255499.3 |
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| CDS CCA 72 bp | TGGCAGGACCCTGGTCTTGAGCAGGTGCGCGCCAGGTaGGGAAGGAATGGAGTGAGACTGGGGAGCTGCGAG | + |
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Preference number: 6 (lower is better) Translates to: WQDPGLEQVRAR*GRNGVRLGSCE Trigger: CTCGCAGCTCCCCAGTCTCACTCCATTCCTTCCCCACCTGGCGCGCACCTGCTCAAGACCAGGGTCCTGCCA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000255499.3 |
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| CDS CAA 72 bp | GCCCCCGCCGCGTTGGATGAGGGCCAACCAAGAGACTaGCACGGTGCTTCCCCAAACCGTGGGCACCGTGAA | + |
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Preference number: 6 (lower is better) Translates to: APAALDEGQPRD*HGASPNRGHRE Trigger: TTCACGGTGCCCACGGTTTGGGGAAGCACCGTGCAAGTCTCTTGGTTGGCCCTCATCCAACGCGGCGGGGGC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000255499.3 |
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| CDS CAA 90 bp | GCGAGCTACGTCGGAGCCAGGAGGCACGTAGCGTCAGCACACAGGTaGCCGCAGATGCAGCTCCTCGGAGCTCCAGTCTTCTCCGCTACC | + |
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Preference number: 6 (lower is better) Translates to: ASYVGARRHVASAHR*PQMQLLGAPVFSAT Trigger: GGTAGCGGAGAAGACTGGAGCTCCGAGGAGCTGCATCTGCGGCAACCTGTGTGCTGACGCTACGTGCCTCCTGGCTCCGACGTAGCTCGC 64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000255499.3 |
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| CDS TCA 72 bp | TCTTGTCTGCGAAGGTGCAGCCCCCGCCGCGTTGGATaGGGGCCAACCAAGAGACTTGCACGGTGCTTCCCC | + |
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Preference number: 6 (lower is better) Translates to: SCLRRCSPRRVG*GPTKRLARCFP Trigger: GGGGAAGCACCGTGCAAGTCTCTTGGTTGGCCCTCATCCAACGCGGCGGGGGCTGCACCTTCGCAGACAAGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000255499.3 |
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| CDS GCA 72 bp | CCCCCGCCGCGTTGGATGAGGGCCAACCAAGAGACTTaGACGGTGCTTCCCCAAACCGTGGGCACCGTGAAA | + |
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Preference number: 6 (lower is better) Translates to: PPPRWMRANQET*TVLPQTVGTVK Trigger: TTTCACGGTGCCCACGGTTTGGGGAAGCACCGTGCAAGTCTCTTGGTTGGCCCTCATCCAACGCGGCGGGGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000255499.3 |
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| CDS CAA 90 bp | GAAGGTGCAGCCCCCGCCGCGTTGGATGAGGGCCAACCAAGAGACTaGCACGGTGCTTCCCCAAACCGTGGGCACCGTGAAATTCGTGTG | + |
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Preference number: 6 (lower is better) Translates to: EGAAPAALDEGQPRD*HGASPNRGHREIRV Trigger: CACACGAATTTCACGGTGCCCACGGTTTGGGGAAGCACCGTGCAAGTCTCTTGGTTGGCCCTCATCCAACGCGGCGGGGGCTGCACCTTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000255499.3 |
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| CDS GCA 72 bp | AGACGCCCCTCTCTCATAAGCCAGATGGATCTTGTCTaGGAAGGTGCAGCCCCCGCCGCGTTGGATGAGGGC | + |
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Preference number: 6 (lower is better) Translates to: RRPSLISQMDLV*EGAAPAALDEG Trigger: GCCCTCATCCAACGCGGCGGGGGCTGCACCTTCGCAGACAAGATCCATCTGGCTTATGAGAGAGGGGCGTCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000255499.3 |
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| CDS CCA 72 bp | TGGATCTTGTCTGCGAAGGTGCAGCCCCCGCCGCGTTaGATGAGGGCCAACCAAGAGACTTGCACGGTGCTT | + |
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Preference number: 6 (lower is better) Translates to: WILSAKVQPPPR*MRANQETCTVL Trigger: AAGCACCGTGCAAGTCTCTTGGTTGGCCCTCATCCAACGCGGCGGGGGCTGCACCTTCGCAGACAAGATCCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000255499.3 |
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| CDS CAA 72 bp | ATGGATCTTGTCTGCGAAGGTGCAGCCCCCGCCGCGTaGGATGAGGGCCAACCAAGAGACTTGCACGGTGCT | + |
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Preference number: 6 (lower is better) Translates to: MDLVCEGAAPAA*DEGQPRDLHGA Trigger: AGCACCGTGCAAGTCTCTTGGTTGGCCCTCATCCAACGCGGCGGGGGCTGCACCTTCGCAGACAAGATCCAT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000255499.3 |
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| CDS CAA 90 bp | ATAAGCCAGATGGATCTTGTCTGCGAAGGTGCAGCCCCCGCCGCGTaGGATGAGGGCCAACCAAGAGACTTGCACGGTGCTTCCCCAAAC | + |
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Preference number: 6 (lower is better) Translates to: ISQMDLVCEGAAPAA*DEGQPRDLHGASPN Trigger: GTTTGGGGAAGCACCGTGCAAGTCTCTTGGTTGGCCCTCATCCAACGCGGCGGGGGCTGCACCTTCGCAGACAAGATCCATCTGGCTTAT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000255499.3 |
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| CDS CAA 72 bp | TCCACCTCAATTCCCAAAGCTTTGAGTATGTCACATTaGCACATGGGGCAAGTCCTGTGTTCTAACAGCCAT | + |
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Preference number: 6 (lower is better) Translates to: STSIPKALSMSH*HMGQVLCSNSH Trigger: ATGGCTGTTAGAACACAGGACTTGCCCCATGTGCAAATGTGACATACTCAAAGCTTTGGGAATTGAGGTGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000255499.3 ENST00000324342.7 |
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| CDS TCA 72 bp | ATTGCAGAATTTTTGTGCCTTTCAGATTGCCGATCATaGTTGCAACAATGTCTACTGCACCCGGGTGAGACA | + |
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Preference number: 6 (lower is better) Translates to: IAEFLCLSDCRS*LQQCLLHPGET Trigger: TGTCTCACCCGGGTGCAGTAGACATTGTTGCAATCATGATCGGCAATCTGAAAGGCACAAAAATTCTGCAAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000255499.3 |
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| CDS CAA 90 bp | CCAGGGCTTCTTAGTATTACTAAACTCAGTGTTGTGGTCACAAGCTaGGTAGTTATTGTTCTTAGGGATGCCTACCACTCCCATAGCATT | + |
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Preference number: 6 (lower is better) Translates to: PGLLSITKLSVVVTS*VVIVLRDAYHSHSI Trigger: AATGCTATGGGAGTGGTAGGCATCCCTAAGAACAATAACTACCAAGCTTGTGACCACAACACTGAGTTTAGTAATACTAAGAAGCCCTGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000324342.7 ENST00000418562.5 |
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| CDS TCA 72 bp | GGAGTTTCGTCTTCTTCAAAGGTTGGGTTGTCAACATaGGGAATAACATCCACTGCCACAGAATTTGCTTCA | + |
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Preference number: 6 (lower is better) Translates to: GVSSSSKVGLST*GITSTATEFAS Trigger: TGAAGCAAATTCTGTGGCAGTGGATGTTATTCCTCATGTTGACAACCCAACCTTTGAAGAAGACGAAACTCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000255499.3 ENST00000324342.7 |
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| CDS CCA 72 bp | AGTCTCTTGATTAGGAGTTTCGTCTTCTTCAAAGGTTaGGTTGTCAACATGAGGAATAACATCCACTGCCAC | + |
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Preference number: 6 (lower is better) Translates to: SLLIRSFVFFKG*VVNMRNNIHCH Trigger: GTGGCAGTGGATGTTATTCCTCATGTTGACAACCCAACCTTTGAAGAAGACGAAACTCCTAATCAAGAGACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000255499.3 ENST00000324342.7 |
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| CDS CCA 72 bp | CGCCACATTCACATGTCTCTATTGCAGTGTAGTTGCTaGTTTCATTGTAATAAGTCACAGTCACATAGGCAC | + |
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Preference number: 6 (lower is better) Translates to: RHIHMSLLQCSC*FHCNKSQSHRH Trigger: GTGCCTATGTGACTGTGACTTATTACAATGAAACCAGCAACTACACTGCAATAGAGACATGTGAATGTGGCG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000324342.7 ENST00000418562.5 |
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| CDS CAA 90 bp | CTGCGATTATCCTCTTCATGGGAGGAGGCACTATTAGATATTTCATaGGATACAGGGACTTGTAAAGACACTGATCCATCTTCAACATCC | + |
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Preference number: 6 (lower is better) Translates to: LRLSSSWEEALLDIS*DTGTCKDTDPSSTS Trigger: GGATGTTGAAGATGGATCAGTGTCTTTACAAGTCCCTGTATCCAATGAAATATCTAATAGTGCCTCCTCCCATGAAGAGGATAATCGCAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000255499.3 ENST00000324342.7 |
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| CDS CAA 72 bp | TCCTCTTCATGGGAGGAGGCACTATTAGATATTTCATaGGATACAGGGACTTGTAAAGACACTGATCCATCT | + |
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Preference number: 6 (lower is better) Translates to: SSSWEEALLDIS*DTGTCKDTDPS Trigger: AGATGGATCAGTGTCTTTACAAGTCCCTGTATCCAATGAAATATCTAATAGTGCCTCCTCCCATGAAGAGGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000255499.3 ENST00000324342.7 |
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| CDS CAA 72 bp | AAGATGTTTGCTGATATTTCCAACTATCAGTCACCATaGTCCACTCACGTCCCTGCTGAACAGAAGTTTGAA | + |
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Preference number: 6 (lower is better) Translates to: KMFADISNYQSP*STHVPAEQKFE Trigger: TTCAAACTTCTGTTCAGCAGGGACGTGAGTGGACAATGGTGACTGATAGTTGGAAATATCAGCAAACATCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000324342.7 |
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| CDS CAA 72 bp | CTTAGTATTACTAAACTCAGTGTTGTGGTCACAAGCTaGGTAGTTATTGTTCTTAGGGATGCCTACCACTCC | + |
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Preference number: 6 (lower is better) Translates to: LSITKLSVVVTS*VVIVLRDAYHS Trigger: GGAGTGGTAGGCATCCCTAAGAACAATAACTACCAAGCTTGTGACCACAACACTGAGTTTAGTAATACTAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000324342.7 ENST00000418562.5 |
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| CDS CAA 90 bp | CCACTGGTGAAGCTAATCCATAAACGCCACATTCACATGTCTCTATaGCAGTGTAGTTGCTGGTTTCATTGTAATAAGTCACAGTCACAT | + |
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Preference number: 6 (lower is better) Translates to: PLVKLIHKRHIHMSL*QCSCWFHCNKSQSH Trigger: ATGTGACTGTGACTTATTACAATGAAACCAGCAACTACACTGCAATAGAGACATGTGAATGTGGCGTTTATGGATTAGCTTCACCAGTGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000324342.7 ENST00000418562.5 |
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| CDS GCA 72 bp | AAACGCCACATTCACATGTCTCTATTGCAGTGTAGTTaGTGGTTTCATTGTAATAAGTCACAGTCACATAGG | + |
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Preference number: 6 (lower is better) Translates to: KRHIHMSLLQCS*WFHCNKSQSHR Trigger: CCTATGTGACTGTGACTTATTACAATGAAACCAGCAACTACACTGCAATAGAGACATGTGAATGTGGCGTTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000324342.7 ENST00000418562.5 |
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| CDS CCA 72 bp | AAAATTTGCCATCTGTATCGTCTGATTGCCAGTCTCTaGAGCATTGTAAATCACAACAGCATCAGCATTTCT | + |
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Preference number: 6 (lower is better) Translates to: KICHLYRLIASL*SIVNHNSISIS Trigger: AGAAATGCTGATGCTGTTGTGATTTACAATGCTCCAGAGACTGGCAATCAGACGATACAGATGGCAAATTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000324342.7 ENST00000418562.5 |
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| CDS TCA 72 bp | ATTGCAGAATTTTTGTGCCTTTCAGATTGCCGATCATaGTTGCAACAATGTCTACTGCACCAAAATTTGCCA | + |
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Preference number: 6 (lower is better) Translates to: IAEFLCLSDCRS*LQQCLLHQNLP Trigger: TGGCAAATTTTGGTGCAGTAGACATTGTTGCAATCATGATCGGCAATCTGAAAGGCACAAAAATTCTGCAAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000324342.7 ENST00000418562.5 |
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| CDS TCA 72 bp | CCTACTTCTATGACCATTGTCACTTGTATGCCTCTTTaGATAGATTGCAGAATTTTTGTGCCTTTCAGATTG | + |
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Preference number: 6 (lower is better) Translates to: PTSMTIVTCMPL*IDCRIFVPFRL Trigger: CAATCTGAAAGGCACAAAAATTCTGCAATCTATTCAAAGAGGCATACAAGTGACAATGGTCATAGAAGTAGG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000255499.3 ENST00000324342.7 ENST00000418562.5 |
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| CDS CAA 90 bp | CTATTTACACAGATTTTAAGATTTAATTTCTCGAACAGCAGTCTCTaGATTAGGAGTTTCGTCTTCTTCAAAGGTTGGGTTGTCAACATG | + |
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Preference number: 6 (lower is better) Translates to: LFTQILRFNFSNSSL*IRSFVFFKGWVVNM Trigger: CATGTTGACAACCCAACCTTTGAAGAAGACGAAACTCCTAATCAAGAGACTGCTGTTCGAGAAATTAAATCTTAAAATCTGTGTAAATAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000255499.3 ENST00000324342.7 |
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| CDS CAA 72 bp | CAGATTTTAAGATTTAATTTCTCGAACAGCAGTCTCTaGATTAGGAGTTTCGTCTTCTTCAAAGGTTGGGTT | + |
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Preference number: 6 (lower is better) Translates to: QILRFNFSNSSL*IRSFVFFKGWV Trigger: AACCCAACCTTTGAAGAAGACGAAACTCCTAATCAAGAGACTGCTGTTCGAGAAATTAAATCTTAAAATCTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000255499.3 ENST00000324342.7 |
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| CDS CAA 72 bp | AAATATGGTTGCACGTTAAGATGCGTACCAAATCATTaGGTTTATACAATTCAATGCACACAGCACAACTAT | + |
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Preference number: 6 (lower is better) Translates to: KYGCTLRCVPNH*VYTIQCTQHNY Trigger: ATAGTTGTGCTGTGTGCATTGAATTGTATAAACCAAATGATTTGGTACGCATCTTAACGTGCAACCATATTT 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000255499.3 ENST00000324342.7 ENST00000418562.5 |
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