RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RNF121 (Homo sapiens)

Ensembl gene IDs: ENSG00000137522

Ensembl transcript IDs: ENST00000361756.8, ENST00000393711.7, ENST00000393713.7, ENST00000490867.5, ENST00000525176.1, ENST00000525243.5, ENST00000526549.5, ENST00000526903.1, ENST00000528683.5, ENST00000530058.5, ENST00000530137.1, ENST00000530655.5, ENST00000532379.1, ENST00000533380.5

Found 638 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GCAACACCTGTCCTGTGTCCCAGACAGTGGGGGAGGGAGGACACCTaGGGCCTCAGTGCTCACCCGTGGCACAAGCCTGAGTACGTTAGC +
Preference number: 1 (lower is better)
Translates to: ATPVLCPRQWGREDT*GLSAHPWHKPEYVS
Trigger: GCTAACGTACTCAGGCTTGTGCCACGGGTGAGCACTGAGGCCCCAGGTGTCCTCCCTCCCCCACTGTCTGGGACACAGGACAGGTGTTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
3UTR TCA 90 bp ACCGCTGGCACGTGTCACCACTCCACTGAAGGATCCACTGAAGAATaGGCTTGCACAAGGGGCCGTCAGTCATGGCTGCCAACAATTGCC +
Preference number: 1 (lower is better)
Translates to: TAGTCHHSTEGSTEE*ACTRGRQSWLPTIA
Trigger: GGCAATTGTTGGCAGCCATGACTGACGGCCCCTTGTGCAAGCTCATTCTTCAGTGGATCCTTCAGTGGAGTGGTGACACGTGCCAGCGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
3UTR GCA 90 bp CAACCCAGCTCATGGAGCTTTATTCAGACGGGAGTGACAACATCCTaGTTCGTTCTTGCTGCCCTTGAAGGGGCAGGCCCTACTGAGCCA +
Preference number: 1 (lower is better)
Translates to: QPSSWSFIQTGVTTS*FVLAALEGAGPTEP
Trigger: TGGCTCAGTAGGGCCTGCCCCTTCAAGGGCAGCAAGAACGAAGCAGGATGTTGTCACTCCCGTCTGAATAAAGCTCCATGAGCTGGGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
3UTR TCA 90 bp GCATACGCACTCTTAGGCTTTCAAGAAGGAAGTGATGTGGCAGAGTaGCCGCTGGCACGTGTCACCACTCCACTGAAGGATCCACTGAAG +
Preference number: 1 (lower is better)
Translates to: AYALLGFQEGSDVAE*PLARVTTPLKDPLK
Trigger: CTTCAGTGGATCCTTCAGTGGAGTGGTGACACGTGCCAGCGGTCACTCTGCCACATCACTTCCTTCTTGAAAGCCTAAGAGTGCGTATGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
3UTR TCA 90 bp CACACACACACACGCATACGCACTCTTAGGCTTTCAAGAAGGAAGTaGTGTGGCAGAGTGACCGCTGGCACGTGTCACCACTCCACTGAA +
Preference number: 1 (lower is better)
Translates to: HTHTRIRTLRLSRRK*CGRVTAGTCHHSTE
Trigger: TTCAGTGGAGTGGTGACACGTGCCAGCGGTCACTCTGCCACATCACTTCCTTCTTGAAAGCCTAAGAGTGCGTATGCGTGTGTGTGTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
3UTR CCA 90 bp AAGTCACTGATAAGGTTCCACTTGCCTCAACCAGCCTATAGCTCTTaGACAGGGGGAGACAGAGTCAGACGCAACACCTGTCCTGTGTCC +
Preference number: 1 (lower is better)
Translates to: KSLIRFHLPQPAYSS*TGGDRVRRNTCPVS
Trigger: GGACACAGGACAGGTGTTGCGTCTGACTCTGTCTCCCCCTGTCCAAGAGCTATAGGCTGGTTGAGGCAAGTGGAACCTTATCAGTGACTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
3UTR TCA 90 bp GACGTCCACAAAGATCTGCTGCCCACACACAGCACACACACTGTCTaGAAGATGTTTGGTAGGCATGCCCGACTCGCTGTAGAACCCTAT +
Preference number: 1 (lower is better)
Translates to: DVHKDLLPTHSTHTV*KMFGRHARLAVEPY
Trigger: ATAGGGTTCTACAGCGAGTCGGGCATGCCTACCAAACATCTTTCAGACAGTGTGTGTGCTGTGTGTGGGCAGCAGATCTTTGTGGACGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526549.5
ENST00000530655.5
3UTR GCA 90 bp AGAATGAGCTTGCACAAGGGGCCGTCAGTCATGGCTGCCAACAATTaGCCCATGGCCCAACTATATGACCTCTATTCTTGGCTGACCACA +
Preference number: 1 (lower is better)
Translates to: RMSLHKGPSVMAANN*PMAQLYDLYSWLTT
Trigger: TGTGGTCAGCCAAGAATAGAGGTCATATAGTTGGGCCATGGGGCAATTGTTGGCAGCCATGACTGACGGCCCCTTGTGCAAGCTCATTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
3UTR GCA 90 bp CTTGAAGGGGCAGGCCCTACTGAGCCATATTCCCTAGAAACCCAATaGCGAAGGCCCATGTTTGACCTCCCACTTTATTCAAGTCGCCTA +
Preference number: 1 (lower is better)
Translates to: LEGAGPTEPYSLETQ*RRPMFDLPLYSSRL
Trigger: TAGGCGACTTGAATAAAGTGGGAGGTCAAACATGGGCCTTCGGCATTGGGTTTCTAGGGAATATGGCTCAGTAGGGCCTGCCCCTTCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
3UTR GCA 90 bp GTGTTCTCAATGATCCCCTCTTCACTGACGTCCACAAAGATCTGCTaGCCACACACAGCACACACACTGTCTGAAAGATGTTTGGTAGGC +
Preference number: 1 (lower is better)
Translates to: VFSMIPSSLTSTKIC*PHTAHTLSERCLVG
Trigger: GCCTACCAAACATCTTTCAGACAGTGTGTGTGCTGTGTGTGGGCAGCAGATCTTTGTGGACGTCAGTGAAGAGGGGATCATTGAGAACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526549.5
ENST00000530655.5
3UTR GCA 90 bp TACGTGTTCTCAATGATCCCCTCTTCACTGACGTCCACAAAGATCTaGTGCCCACACACAGCACACACACTGTCTGAAAGATGTTTGGTA +
Preference number: 1 (lower is better)
Translates to: YVFSMIPSSLTSTKI*CPHTAHTLSERCLV
Trigger: TACCAAACATCTTTCAGACAGTGTGTGTGCTGTGTGTGGGCAGCAGATCTTTGTGGACGTCAGTGAAGAGGGGATCATTGAGAACACGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526549.5
ENST00000530655.5
3UTR TCA 90 bp GTGCTGATTCTTCCAGTTGTCCCAAAACAAATCTTCAATGAATTCTaGGGCCCCAAGGCTTCCCTTGTTGGCCAAGTCACTGATAAGGTT +
Preference number: 1 (lower is better)
Translates to: VLILPVVPKQIFNEF*GPKASLVGQVTDKV
Trigger: AACCTTATCAGTGACTTGGCCAACAAGGGAAGCCTTGGGGCCTCAGAATTCATTGAAGATTTGTTTTGGGACAACTGGAAGAATCAGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
3UTR-3UTR TCA 90 bp GGGGTCCTGAGTGGCCCAAGCACCCCTTTGAGTCTTTCCCACCCAGGAGGTCTTGGGAGGAGAGTGCCCTaGGGTCCATGGCGTGTGGGG +
Preference number: 2 (lower is better)
Translates to: GVLSGPSTPLSLSHPGGLGRRVP*GPWRVG
Trigger: CCCCACACGCCATGGACCTCAGGGCACTCTCCTCCC...AAGACCTCCTGGGTGGGAAAGACTCAAAGGGGTGCTTGGGCCACTCAGGACCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
ENST00000533380.5
3UTR-3UTR CCA 90 bp TATCCCTCCCCAGTCCGACACAGCCAGAGGGGTCCTGAGTGGCCCAAGCACCCCCAGAGGGGTCCTGAGTaGCCCAAGCACCCCTTTGAG +
Preference number: 2 (lower is better)
Translates to: YPSPVRHSQRGPEWPKHPQRGPE*PKHPFE
Trigger: CTCAAAGGGGTGCTTGGGCCACTCAGGACCCCTCTG...GGGGTGCTTGGGCCACTCAGGACCCCTCTGGCTGTGTCGGACTGGGGAGGGATA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 5 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
ENST00000533380.5
3UTR-3UTR TCA 90 bp ACGGGAGTGACAACATCCTGCTTCGTTCTTGCTGCCCTTGAAGGGGCAGGCCCTGGGAGGAGAGTGCCCTaGGGTCCATGGCGTGTGGGG +
Preference number: 2 (lower is better)
Translates to: TGVTTSCFVLAALEGAGPGRRVP*GPWRVG
Trigger: CCCCACACGCCATGGACCTCAGGGCACTCTCCTCCC...AGGGCCTGCCCCTTCAAGGGCAGCAAGAACGAAGCAGGATGTTGTCACTCCCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
3UTR-3UTR TCA 90 bp GGCGTGTGGGGTGGGTTTTCCACTGATGCTCTTCATCACTATTCCAGGCCCAGGGGGAGGAGAGTGCCCTaGGGTCCATGGCGTGTGGGG +
Preference number: 2 (lower is better)
Translates to: GVWGGFSTDALHHYSRPRGRRVP*GPWRVG
Trigger: CCCCACACGCCATGGACCTCAGGGCACTCTCCTCCC...CCTGGGCCTGGAATAGTGATGAAGAGCATCAGTGGAAAACCCACCCCACACGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000393713.7
ENST00000525243.5
ENST00000526549.5
3UTR-3UTR CCA 90 bp TATCCCTCCCCAGTCCGACACAGCCAGAGGGGTCCTGAGTGGCCCAAGCACCCCCCAGCCTATAGCTCTTaGACAGGGGGAGACAGAGTC +
Preference number: 2 (lower is better)
Translates to: YPSPVRHSQRGPEWPKHPPAYSS*TGGDRV
Trigger: GACTCTGTCTCCCCCTGTCCAAGAGCTATAGGCTGG...GGGGTGCTTGGGCCACTCAGGACCCCTCTGGCTGTGTCGGACTGGGGAGGGATA
62% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
3UTR-3UTR GCA 90 bp ACGGGAGTGACAACATCCTGCTTCGTTCTTGCTGCCCTTGAAGGGGCAGGCCCTGCTCTGCCCCCACCCTaGTTAGGCAGGGAGGGTGAA +
Preference number: 2 (lower is better)
Translates to: TGVTTSCFVLAALEGAGPALPPP*LGREGE
Trigger: TTCACCCTCCCTGCCTAAGCAGGGTGGGGGCAGAGC...AGGGCCTGCCCCTTCAAGGGCAGCAAGAACGAAGCAGGATGTTGTCACTCCCGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
3UTR-3UTR TCA 90 bp ACAGGCTGCCAGGCTACCAAGTATCGAAGCCAGTCCAGCAGTTGCCCATACATGCAGCCAGAGGGGTCCTaGGTGGCCCAAGCACCCCTT +
Preference number: 2 (lower is better)
Translates to: TGCQATKYRSQSSSCPYMQPEGS*VAQAPL
Trigger: AAGGGGTGCTTGGGCCACTCAGGACCCCTCTGGCTG...CATGTATGGGCAACTGCTGGACTGGCTTCGATACTTGGTAGCCTGGCAGCCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393713.7
ENST00000526549.5
3UTR-3UTR GCA 90 bp GACAGGCTGCCAGGCTACCAAGTATCGAAGCCAGTCCAGCAGTTGCCCATACATGGGCAGGGAGGAGAGTaGCCTGAGGTCCATGGCGTG +
Preference number: 2 (lower is better)
Translates to: DRLPGYQVSKPVQQLPIHGQGGE*PEVHGV
Trigger: CACGCCATGGACCTCAGGGCACTCTCCTCCCTGCCC...ATGTATGGGCAACTGCTGGACTGGCTTCGATACTTGGTAGCCTGGCAGCCTGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393713.7
ENST00000525243.5
ENST00000526549.5
3UTR-3UTR GCA 90 bp AGGCCCATGTTTGACCTCCCACTTTATTCAAGTCGCCTAGGACTAGGGCTGGGGCACCTGGGGCCTCAGTaGTCACCCGTGGCACAAGCC +
Preference number: 2 (lower is better)
Translates to: RPMFDLPLYSSRLGLGLGHLGPQ*SPVAQA
Trigger: GGCTTGTGCCACGGGTGAGCACTGAGGCCCCAGGTG...CCCCAGCCCTAGTCCTAGGCGACTTGAATAAAGTGGGAGGTCAAACATGGGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
3UTR-3UTR CCA 90 bp GAGTGCCCTGAGGTCCATGGCGTGTGGGGTGGGTTTTCCACTGATGCTCTTCATCCCAGGAGGTCTTTGTaGGCAGGGAGGAGAGTGCCC +
Preference number: 2 (lower is better)
Translates to: ECPEVHGVWGGFSTDALHPRRSL*AGRRVP
Trigger: GGGCACTCTCCTCCCTGCCCACAAAGACCTCCTGGG...ATGAAGAGCATCAGTGGAAAACCCACCCCACACGCCATGGACCTCAGGGCACTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000525243.5
ENST00000526549.5
ENST00000530137.1
ENST00000533380.5
3UTR-3UTR CCA 90 bp GGAGAGTGCCCTGAGGTCCATGGCGTGTGGGGTGGGTTTTCCACTGATGCTCTTCAGAGGGGTCCTGAGTaGCCCAAGCACCCCTTTGAG +
Preference number: 2 (lower is better)
Translates to: GECPEVHGVWGGFSTDALQRGPE*PKHPFE
Trigger: CTCAAAGGGGTGCTTGGGCCACTCAGGACCCCTCTG...AAGAGCATCAGTGGAAAACCCACCCCACACGCCATGGACCTCAGGGCACTCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
ENST00000533380.5
3UTR-3UTR CCA 90 bp TATCCCTCCCCAGTCCGACACAGCCAGAGGGGTCCTGAGTGGCCCAAGCACCCCAAACCAAAAATGTCATaGCTCTGCCCCCACCCTGCT +
Preference number: 2 (lower is better)
Translates to: YPSPVRHSQRGPEWPKHPKPKMS*LCPHPA
Trigger: AGCAGGGTGGGGGCAGAGCCATGACATTTTTGGTTT...GGGGTGCTTGGGCCACTCAGGACCCCTCTGGCTGTGTCGGACTGGGGAGGGATA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
3UTR-3UTR TCA 90 bp CACAAGCCTGAGTACGTTAGCTCTTCTATACTAAGTGCACCAGGCTTGAGCCCCGGGAGGAGAGTGCCCTaGGGTCCATGGCGTGTGGGG +
Preference number: 2 (lower is better)
Translates to: HKPEYVSSSILSAPGLSPGRRVP*GPWRVG
Trigger: CCCCACACGCCATGGACCTCAGGGCACTCTCCTCCC...GGGGCTCAAGCCTGGTGCACTTAGTATAGAAGAGCTAACGTACTCAGGCTTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
3UTR-3UTR TCA 90 bp GAGTGCCCTGAGGTCCATGGCGTGTGGGGTGGGTTTTCCACTGATGCTCTTCATGCCCAAGCACCCCTTTaGGTCTTTCCCACCCAGGAG +
Preference number: 2 (lower is better)
Translates to: ECPEVHGVWGGFSTDALHAQAPL*VFPTQE
Trigger: CTCCTGGGTGGGAAAGACTCAAAGGGGTGCTTGGGC...ATGAAGAGCATCAGTGGAAAACCCACCCCACACGCCATGGACCTCAGGGCACTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
ENST00000533380.5
3UTR-3UTR TCA 90 bp TATCCCTCCCCAGTCCGACACAGCCAGAGGGGTCCTGAGTGGCCCAAGCACCCCCAAGGACATATCATCTaGCACAGGGAGAAGCTGACA +
Preference number: 2 (lower is better)
Translates to: YPSPVRHSQRGPEWPKHPQGHII*HREKLT
Trigger: TGTCAGCTTCTCCCTGTGTCAGATGATATGTCCTTG...GGGGTGCTTGGGCCACTCAGGACCCCTCTGGCTGTGTCGGACTGGGGAGGGATA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
3UTR-3UTR TCA 90 bp GAGTGCCCTGAGGTCCATGGCGTGTGGGGTGGGTTTTCCACTGATGCTCTTCATGCAGTTGCCCATACATaGCGTGAGGCCTCTCCCAGG +
Preference number: 2 (lower is better)
Translates to: ECPEVHGVWGGFSTDALHAVAHT*REASPR
Trigger: CCTGGGAGAGGCCTCACGTCATGTATGGGCAACTGC...ATGAAGAGCATCAGTGGAAAACCCACCCCACACGCCATGGACCTCAGGGCACTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393713.7
ENST00000525243.5
ENST00000526549.5
3UTR-3UTR CCA 90 bp GGGGTCCTGAGTGGCCCAAGCACCCCTTTGAGTCTTTCCCACCCAGGAGGTCTTGAGGTCCATGGCGTGTaGGGTGGGTTTTCCACTGAT +
Preference number: 2 (lower is better)
Translates to: GVLSGPSTPLSLSHPGGLEVHGV*GGFSTD
Trigger: ATCAGTGGAAAACCCACCCCACACGCCATGGACCTC...AAGACCTCCTGGGTGGGAAAGACTCAAAGGGGTGCTTGGGCCACTCAGGACCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
ENST00000533380.5
3UTR-3UTR CCA 90 bp GATGACAGGCTGCCAGGCTACCAAGTATCGAAGCCAGTCCAGCAGTTGCCCATACCCAGGAGGTCTTTGTaGGCAGGGAGGAGAGTGCCC +
Preference number: 2 (lower is better)
Translates to: DDRLPGYQVSKPVQQLPIPRRSL*AGRRVP
Trigger: GGGCACTCTCCTCCCTGCCCACAAAGACCTCCTGGG...TATGGGCAACTGCTGGACTGGCTTCGATACTTGGTAGCCTGGCAGCCTGTCATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393713.7
ENST00000525243.5
ENST00000526549.5
3UTR-3UTR CCA 90 bp CGACACAGCCAGAGGGGTCCTGAGTGGCCCAAGCACCCCTTTGAGTCTTTCCCACTCAGTGCTCACCCGTaGCACAAGCCTGAGTACGTT +
Preference number: 2 (lower is better)
Translates to: RHSQRGPEWPKHPFESFPLSAHP*HKPEYV
Trigger: AACGTACTCAGGCTTGTGCCACGGGTGAGCACTGAG...TGGGAAAGACTCAAAGGGGTGCTTGGGCCACTCAGGACCCCTCTGGCTGTGTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
3UTR-3UTR TCA 90 bp GATGCCTTGGACTACACCAATGATGACAGGCTGCCAGGCTACCAAGTATCGAAGCAGCCAGAGGGGTCCTaGGTGGCCCAAGCACCCCTT +
Preference number: 2 (lower is better)
Translates to: DALDYTNDDRLPGYQVSKQPEGS*VAQAPL
Trigger: AAGGGGTGCTTGGGCCACTCAGGACCCCTCTGGCTG...CTTCGATACTTGGTAGCCTGGCAGCCTGTCATCATTGGTGTAGTCCAAGGCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393713.7
ENST00000526549.5
3UTR-3UTR TCA 90 bp CTGAAGGATCCACTGAAGAATGAGCTTGCACAAGGGGCCGTCAGTCATGGCTGCACCTCTATTCTTGGCTaGCCACAGCCCTGCCCACGG +
Preference number: 2 (lower is better)
Translates to: LKDPLKNELAQGAVSHGCTSILG*PQPCPR
Trigger: CCGTGGGCAGGGCTGTGGTCAGCCAAGAATAGAGGT...GCAGCCATGACTGACGGCCCCTTGTGCAAGCTCATTCTTCAGTGGATCCTTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
3UTR-3UTR TCA 90 bp GAAGGGGCAGGCCCTACTGAGCCATATTCCCTAGAAACCCAATGCCGAAGGCCCGGATCCACTGAAGAATaGGCTTGCACAAGGGGCCGT +
Preference number: 2 (lower is better)
Translates to: EGAGPTEPYSLETQCRRPGSTEE*ACTRGR
Trigger: ACGGCCCCTTGTGCAAGCTCATTCTTCAGTGGATCC...GGGCCTTCGGCATTGGGTTTCTAGGGAATATGGCTCAGTAGGGCCTGCCCCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
3UTR-3UTR TCA 90 bp CAAGTATCGAAGCCAGTCCAGCAGTTGCCCATACATGACGTGAGGCCTCTCCCAGCAGTTGCCCATACATaGCGTGAGGCCTCTCCCAGG +
Preference number: 2 (lower is better)
Translates to: QVSKPVQQLPIHDVRPLPAVAHT*REASPR
Trigger: CCTGGGAGAGGCCTCACGTCATGTATGGGCAACTGC...TGGGAGAGGCCTCACGTCATGTATGGGCAACTGCTGGACTGGCTTCGATACTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393713.7
ENST00000525243.5
ENST00000526549.5
ENST00000530655.5
3UTR-3UTR TCA 90 bp ACAGGCTGCCAGGCTACCAAGTATCGAAGCCAGTCCAGCAGTTGCCCATACATGGCAGTTGCCCATACATaGCGTGAGGCCTCTCCCAGG +
Preference number: 2 (lower is better)
Translates to: TGCQATKYRSQSSSCPYMAVAHT*REASPR
Trigger: CCTGGGAGAGGCCTCACGTCATGTATGGGCAACTGC...CATGTATGGGCAACTGCTGGACTGGCTTCGATACTTGGTAGCCTGGCAGCCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393713.7
ENST00000525243.5
ENST00000526549.5
ENST00000530655.5
3UTR-3UTR CCA 90 bp GGAGAGTGCCCTGAGGTCCATGGCGTGTGGGGTGGGTTTTCCACTGATGCTCTTGAGGTCCATGGCGTGTaGGGTGGGTTTTCCACTGAT +
Preference number: 2 (lower is better)
Translates to: GECPEVHGVWGGFSTDALEVHGV*GGFSTD
Trigger: ATCAGTGGAAAACCCACCCCACACGCCATGGACCTC...AAGAGCATCAGTGGAAAACCCACCCCACACGCCATGGACCTCAGGGCACTCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000525243.5
ENST00000526549.5
ENST00000530137.1
ENST00000533380.5
3UTR-3UTR CCA 90 bp GAGTGCCCTGAGGTCCATGGCGTGTGGGGTGGGTTTTCCACTGATGCTCTTCATAGGCCTTCAGCTACCTaGGAGCCCAGCAGTGTTCTC +
Preference number: 2 (lower is better)
Translates to: ECPEVHGVWGGFSTDALHRPSAT*EPSSVL
Trigger: GAGAACACTGCTGGGCTCCCAGGTAGCTGAAGGCCT...ATGAAGAGCATCAGTGGAAAACCCACCCCACACGCCATGGACCTCAGGGCACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
3UTR-3UTR TCA 90 bp AAGAATGAGCTTGCACAAGGGGCCGTCAGTCATGGCTGCCAACAATTGCCCCATGCCCAAGCACCCCTTTaGGTCTTTCCCACCCAGGAG +
Preference number: 2 (lower is better)
Translates to: KNELAQGAVSHGCQQLPHAQAPL*VFPTQE
Trigger: CTCCTGGGTGGGAAAGACTCAAAGGGGTGCTTGGGC...ATGGGGCAATTGTTGGCAGCCATGACTGACGGCCCCTTGTGCAAGCTCATTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
3UTR-3UTR TCA 90 bp GTGACAACATCCTGCTTCGTTCTTGCTGCCCTTGAAGGGGCAGGCCCTACTGAGGGATCCACTGAAGAATaGGCTTGCACAAGGGGCCGT +
Preference number: 2 (lower is better)
Translates to: VTTSCFVLAALEGAGPTEGSTEE*ACTRGR
Trigger: ACGGCCCCTTGTGCAAGCTCATTCTTCAGTGGATCC...CTCAGTAGGGCCTGCCCCTTCAAGGGCAGCAAGAACGAAGCAGGATGTTGTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
3UTR-3UTR TCA 90 bp GGAGAGTGCCCTGAGGTCCATGGCGTGTGGGGTGGGTTTTCCACTGATGCTCTTGGCCCAGGATGTAGTTaGTGCCTTGGACTACACCAA +
Preference number: 2 (lower is better)
Translates to: GECPEVHGVWGGFSTDALGPGCS*CLGLHQ
Trigger: TTGGTGTAGTCCAAGGCATCAACTACATCCTGGGCC...AAGAGCATCAGTGGAAAACCCACCCCACACGCCATGGACCTCAGGGCACTCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393713.7
ENST00000525243.5
ENST00000526549.5
3UTR-3UTR TCA 90 bp AGGGAGGACACCTGGGGCCTCAGTGCTCACCCGTGGCACAAGCCTGAGTACGTTGGAACAACCCACATCTaGAAGAGGGTCACCATTTTC +
Preference number: 2 (lower is better)
Translates to: REDTWGLSAHPWHKPEYVGTTHI*KRVTIF
Trigger: GAAAATGGTGACCCTCTTTCAGATGTGGGTTGTTCC...AACGTACTCAGGCTTGTGCCACGGGTGAGCACTGAGGCCCCAGGTGTCCTCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526549.5
3UTR-3UTR GCA 90 bp AGAGATGAGAAGGCTCCTTTAAACCAAAAATGTCATGGCTCTGCCCCCACCCTGGGGCAGGGAGGAGAGTaGCCTGAGGTCCATGGCGTG +
Preference number: 2 (lower is better)
Translates to: RDEKAPLNQKCHGSAPTLGQGGE*PEVHGV
Trigger: CACGCCATGGACCTCAGGGCACTCTCCTCCCTGCCC...CAGGGTGGGGGCAGAGCCATGACATTTTTGGTTTAAAGGAGCCTTCTCATCTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
3UTR-3UTR GCA 90 bp TGGCACAAGCCTGAGTACGTTAGCTCTTCTATACTAAGTGCACCAGGCTTGAGCGGGCAGGGAGGAGAGTaGCCTGAGGTCCATGGCGTG +
Preference number: 2 (lower is better)
Translates to: WHKPEYVSSSILSAPGLSGQGGE*PEVHGV
Trigger: CACGCCATGGACCTCAGGGCACTCTCCTCCCTGCCC...GCTCAAGCCTGGTGCACTTAGTATAGAAGAGCTAACGTACTCAGGCTTGTGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
3UTR-3UTR GCA 90 bp TGCCCACGGGCGAGTATCCATGGTGCTGATTCTTCCAGTTGTCCCAAAACAAATGGGCAGGGAGGAGAGTaGCCTGAGGTCCATGGCGTG +
Preference number: 2 (lower is better)
Translates to: CPRASIHGADSSSCPKTNGQGGE*PEVHGV
Trigger: CACGCCATGGACCTCAGGGCACTCTCCTCCCTGCCC...ATTTGTTTTGGGACAACTGGAAGAATCAGCACCATGGATACTCGCCCGTGGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
3UTR-3UTR GCA 90 bp TGCCCACGGGCGAGTATCCATGGTGCTGATTCTTCCAGTTGTCCCAAAACAAATCACCTGGGGCCTCAGTaGTCACCCGTGGCACAAGCC +
Preference number: 2 (lower is better)
Translates to: CPRASIHGADSSSCPKTNHLGPQ*SPVAQA
Trigger: GGCTTGTGCCACGGGTGAGCACTGAGGCCCCAGGTG...ATTTGTTTTGGGACAACTGGAAGAATCAGCACCATGGATACTCGCCCGTGGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
3UTR-3UTR CCA 90 bp GTGACAACATCCTGCTTCGTTCTTGCTGCCCTTGAAGGGGCAGGCCCTACTGAGCCAGCCTATAGCTCTTaGACAGGGGGAGACAGAGTC +
Preference number: 2 (lower is better)
Translates to: VTTSCFVLAALEGAGPTEPAYSS*TGGDRV
Trigger: GACTCTGTCTCCCCCTGTCCAAGAGCTATAGGCTGG...CTCAGTAGGGCCTGCCCCTTCAAGGGCAGCAAGAACGAAGCAGGATGTTGTCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
3UTR-3UTR CCA 90 bp TTCAAGAAGGAAGTGATGTGGCAGAGTGACCGCTGGCACGTGTCACCACTCCACAGGGGCCGTCAGTCATaGCTGCCAACAATTGCCCCA +
Preference number: 2 (lower is better)
Translates to: FKKEVMWQSDRWHVSPLHRGRQS*LPTIAP
Trigger: TGGGGCAATTGTTGGCAGCCATGACTGACGGCCCCT...GTGGAGTGGTGACACGTGCCAGCGGTCACTCTGCCACATCACTTCCTTCTTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
3UTR-3UTR CCA 90 bp GAAGGGGCAGGCCCTACTGAGCCATATTCCCTAGAAACCCAATGCCGAAGGCCCTGTAGGGATATTCCCTaGACTGGGAATCCCCTGCCA +
Preference number: 2 (lower is better)
Translates to: EGAGPTEPYSLETQCRRPCRDIP*TGNPLP
Trigger: TGGCAGGGGATTCCCAGTCCAGGGAATATCCCTACA...GGGCCTTCGGCATTGGGTTTCTAGGGAATATGGCTCAGTAGGGCCTGCCCCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
3UTR CAA 90 bp GCCCCAAGGCTTCCCTTGTTGGCCAAGTCACTGATAAGGTTCCACTaGCCTCAACCAGCCTATAGCTCTTGGACAGGGGGAGACAGAGTC +
Preference number: 2 (lower is better)
Translates to: APRLPLLAKSLIRFH*PQPAYSSWTGGDRV
Trigger: GACTCTGTCTCCCCCTGTCCAAGAGCTATAGGCTGGTTGAGGCAAGTGGAACCTTATCAGTGACTTGGCCAACAAGGGAAGCCTTGGGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
3UTR-3UTR TCA 90 bp CGGGCGAGTATCCATGGTGCTGATTCTTCCAGTTGTCCCAAAACAAATCTTCAAGGGAGGAGAGTGCCCTaGGGTCCATGGCGTGTGGGG +
Preference number: 2 (lower is better)
Translates to: RASIHGADSSSCPKTNLQGRRVP*GPWRVG
Trigger: CCCCACACGCCATGGACCTCAGGGCACTCTCCTCCC...TTGAAGATTTGTTTTGGGACAACTGGAAGAATCAGCACCATGGATACTCGCCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
3UTR-3UTR TCA 90 bp GAAGGGGCAGGCCCTACTGAGCCATATTCCCTAGAAACCCAATGCCGAAGGCCCGTTCTCGGCCAGAGATaGGAAGGCTCCTTTAAACCA +
Preference number: 2 (lower is better)
Translates to: EGAGPTEPYSLETQCRRPVLGQR*EGSFKP
Trigger: TGGTTTAAAGGAGCCTTCTCATCTCTGGCCGAGAAC...GGGCCTTCGGCATTGGGTTTCTAGGGAATATGGCTCAGTAGGGCCTGCCCCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
3UTR-3UTR TCA 90 bp AGGCCCATGTTTGACCTCCCACTTTATTCAAGTCGCCTAGGACTAGGGCTGGGGGGATCCACTGAAGAATaGGCTTGCACAAGGGGCCGT +
Preference number: 2 (lower is better)
Translates to: RPMFDLPLYSSRLGLGLGGSTEE*ACTRGR
Trigger: ACGGCCCCTTGTGCAAGCTCATTCTTCAGTGGATCC...CCCCAGCCCTAGTCCTAGGCGACTTGAATAAAGTGGGAGGTCAAACATGGGCCT
56% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
3UTR-3UTR TCA 90 bp CCTGAGGTCCATGGCGTGTGGGGTGGGTTTTCCACTGATGCTCTTCATCACTATTGCCCATACATGACGTaGGGCCTCTCCCAGGGATTG +
Preference number: 2 (lower is better)
Translates to: PEVHGVWGGFSTDALHHYCPYMT*GLSQGL
Trigger: CAATCCCTGGGAGAGGCCTCACGTCATGTATGGGCA...ATAGTGATGAAGAGCATCAGTGGAAAACCCACCCCACACGCCATGGACCTCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393713.7
ENST00000525243.5
ENST00000526549.5
3UTR-3UTR GCA 90 bp TCATATTCTTCTGCCTCACGTACACACACACACACACACACACACGCATACGCAGGGCAGGGAGGAGAGTaGCCTGAGGTCCATGGCGTG +
Preference number: 2 (lower is better)
Translates to: SYSSASRTHTHTHTHAYAGQGGE*PEVHGV
Trigger: CACGCCATGGACCTCAGGGCACTCTCCTCCCTGCCC...TGCGTATGCGTGTGTGTGTGTGTGTGTGTGTGTACGTGAGGCAGAAGAATATGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
3UTR-3UTR GCA 90 bp TGGCACAAGCCTGAGTACGTTAGCTCTTCTATACTAAGTGCACCAGGCTTGAGCGCTCTGCCCCCACCCTaGTTAGGCAGGGAGGGTGAA +
Preference number: 2 (lower is better)
Translates to: WHKPEYVSSSILSAPGLSALPPP*LGREGE
Trigger: TTCACCCTCCCTGCCTAAGCAGGGTGGGGGCAGAGC...GCTCAAGCCTGGTGCACTTAGTATAGAAGAGCTAACGTACTCAGGCTTGTGCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
3UTR-3UTR CCA 90 bp CACAAGCCTGAGTACGTTAGCTCTTCTATACTAAGTGCACCAGGCTTGAGCCCCCAGAGGGGTCCTGAGTaGCCCAAGCACCCCTTTGAG +
Preference number: 2 (lower is better)
Translates to: HKPEYVSSSILSAPGLSPQRGPE*PKHPFE
Trigger: CTCAAAGGGGTGCTTGGGCCACTCAGGACCCCTCTG...GGGGCTCAAGCCTGGTGCACTTAGTATAGAAGAGCTAACGTACTCAGGCTTGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
3UTR-3UTR CCA 90 bp GCTTCCCTTGTTGGCCAAGTCACTGATAAGGTTCCACTTGCCTCAACCAGCCTACAGAGGGGTCCTGAGTaGCCCAAGCACCCCTTTGAG +
Preference number: 2 (lower is better)
Translates to: ASLVGQVTDKVPLASTSLQRGPE*PKHPFE
Trigger: CTCAAAGGGGTGCTTGGGCCACTCAGGACCCCTCTG...TAGGCTGGTTGAGGCAAGTGGAACCTTATCAGTGACTTGGCCAACAAGGGAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
3UTR-3UTR TCA 90 bp CGGGCGAGTATCCATGGTGCTGATTCTTCCAGTTGTCCCAAAACAAATCTTCAACAGCCAGAGGGGTCCTaGGTGGCCCAAGCACCCCTT +
Preference number: 2 (lower is better)
Translates to: RASIHGADSSSCPKTNLQQPEGS*VAQAPL
Trigger: AAGGGGTGCTTGGGCCACTCAGGACCCCTCTGGCTG...TTGAAGATTTGTTTTGGGACAACTGGAAGAATCAGCACCATGGATACTCGCCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
3UTR-3UTR TCA 90 bp CCGTCAGTCATGGCTGCCAACAATTGCCCCATGGCCCAACTATATGACCTCTATTGCCCATACATGACGTaGGGCCTCTCCCAGGGATTG +
Preference number: 2 (lower is better)
Translates to: PSVMAANNCPMAQLYDLYCPYMT*GLSQGL
Trigger: CAATCCCTGGGAGAGGCCTCACGTCATGTATGGGCA...ATAGAGGTCATATAGTTGGGCCATGGGGCAATTGTTGGCAGCCATGACTGACGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393713.7
ENST00000526549.5
3UTR-3UTR TCA 90 bp GGGCGAGTATCCATGGTGCTGATTCTTCCAGTTGTCCCAAAACAAATCTTCAATCAGCCAGAGGGGTCCTaGGTGGCCCAAGCACCCCTT +
Preference number: 2 (lower is better)
Translates to: GRVSMVLILPVVPKQIFNQPEGS*VAQAPL
Trigger: AAGGGGTGCTTGGGCCACTCAGGACCCCTCTGGCTG...ATTGAAGATTTGTTTTGGGACAACTGGAAGAATCAGCACCATGGATACTCGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
3UTR-3UTR TCA 90 bp CGACACAGCCAGAGGGGTCCTGAGTGGCCCAAGCACCCCTTTGAGTCTTTCCCAAAAACAAATCTTCAATaGATTCTGAGGCCCCAAGGC +
Preference number: 2 (lower is better)
Translates to: RHSQRGPEWPKHPFESFPKTNLQ*ILRPQG
Trigger: GCCTTGGGGCCTCAGAATTCATTGAAGATTTGTTTT...TGGGAAAGACTCAAAGGGGTGCTTGGGCCACTCAGGACCCCTCTGGCTGTGTCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
3UTR-3UTR TCA 90 bp GTGACAACATCCTGCTTCGTTCTTGCTGCCCTTGAAGGGGCAGGCCCTACTGAGCAAGGACATATCATCTaGCACAGGGAGAAGCTGACA +
Preference number: 2 (lower is better)
Translates to: VTTSCFVLAALEGAGPTEQGHII*HREKLT
Trigger: TGTCAGCTTCTCCCTGTGTCAGATGATATGTCCTTG...CTCAGTAGGGCCTGCCCCTTCAAGGGCAGCAAGAACGAAGCAGGATGTTGTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
3UTR-3UTR TCA 90 bp TACGTGTTCTCAATGATCCCCTCTTCACTGACGTCCACAAAGATCTGCTGCCCATGCCCATACATGACGTaGGGCCTCTCCCAGGGATTG +
Preference number: 2 (lower is better)
Translates to: YVFSMIPSSLTSTKICCPCPYMT*GLSQGL
Trigger: CAATCCCTGGGAGAGGCCTCACGTCATGTATGGGCA...TGGGCAGCAGATCTTTGTGGACGTCAGTGAAGAGGGGATCATTGAGAACACGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526549.5
ENST00000530655.5
3UTR-3UTR TCA 90 bp TACCAAGTATCGAAGCCAGTCCAGCAGTTGCCCATACATGACGTGAGGCCTCTCGGCCCAGGATGTAGTTaGTGCCTTGGACTACACCAA +
Preference number: 2 (lower is better)
Translates to: YQVSKPVQQLPIHDVRPLGPGCS*CLGLHQ
Trigger: TTGGTGTAGTCCAAGGCATCAACTACATCCTGGGCC...GAGAGGCCTCACGTCATGTATGGGCAACTGCTGGACTGGCTTCGATACTTGGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393713.7
ENST00000525243.5
ENST00000526549.5
3UTR-3UTR TCA 90 bp GTGACAACATCCTGCTTCGTTCTTGCTGCCCTTGAAGGGGCAGGCCCTACTGAGGGGTGGGTTTTCCACTaGTGCTCTTCATCACTATTC +
Preference number: 2 (lower is better)
Translates to: VTTSCFVLAALEGAGPTEGWVFH*CSSSLF
Trigger: GAATAGTGATGAAGAGCATCAGTGGAAAACCCACCC...CTCAGTAGGGCCTGCCCCTTCAAGGGCAGCAAGAACGAAGCAGGATGTTGTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000393713.7
ENST00000526549.5
3UTR-3UTR GCA 90 bp CCAGCAGTGTTCTCGGCCAGAGATGAGAAGGCTCCTTTAAACCAAAAATGTCATGCTCTGCCCCCACCCTaGTTAGGCAGGGAGGGTGAA +
Preference number: 2 (lower is better)
Translates to: PAVFSARDEKAPLNQKCHALPPP*LGREGE
Trigger: TTCACCCTCCCTGCCTAAGCAGGGTGGGGGCAGAGC...ATGACATTTTTGGTTTAAAGGAGCCTTCTCATCTCTGGCCGAGAACACTGCTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
3UTR-3UTR GCA 90 bp TGGCACAAGCCTGAGTACGTTAGCTCTTCTATACTAAGTGCACCAGGCTTGAGCGCCGTCAGTCATGGCTaGCAACAATTGCCCCATGGC +
Preference number: 2 (lower is better)
Translates to: WHKPEYVSSSILSAPGLSAVSHG*QQLPHG
Trigger: GCCATGGGGCAATTGTTGGCAGCCATGACTGACGGC...GCTCAAGCCTGGTGCACTTAGTATAGAAGAGCTAACGTACTCAGGCTTGTGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
3UTR-3UTR GCA 90 bp CAAGTATCGAAGCCAGTCCAGCAGTTGCCCATACATGACGTGAGGCCTCTCCCACCAATGATGACAGGCTaGCAGGCTACCAAGTATCGA +
Preference number: 2 (lower is better)
Translates to: QVSKPVQQLPIHDVRPLPPMMTG*QATKYR
Trigger: TCGATACTTGGTAGCCTGGCAGCCTGTCATCATTGG...TGGGAGAGGCCTCACGTCATGTATGGGCAACTGCTGGACTGGCTTCGATACTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393713.7
ENST00000525243.5
ENST00000526549.5
ENST00000530655.5
3UTR-3UTR GCA 90 bp ACAGGCTGCCAGGCTACCAAGTATCGAAGCCAGTCCAGCAGTTGCCCATACATGCCAATGATGACAGGCTaGCAGGCTACCAAGTATCGA +
Preference number: 2 (lower is better)
Translates to: TGCQATKYRSQSSSCPYMPMMTG*QATKYR
Trigger: TCGATACTTGGTAGCCTGGCAGCCTGTCATCATTGG...CATGTATGGGCAACTGCTGGACTGGCTTCGATACTTGGTAGCCTGGCAGCCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393713.7
ENST00000525243.5
ENST00000526549.5
ENST00000530655.5
3UTR-3UTR TCA 90 bp TTCAAGAAGGAAGTGATGTGGCAGAGTGACCGCTGGCACGTGTCACCACTCCACATCTTCAATGAATTCTaGGGCCCCAAGGCTTCCCTT +
Preference number: 2 (lower is better)
Translates to: FKKEVMWQSDRWHVSPLHIFNEF*GPKASL
Trigger: AAGGGAAGCCTTGGGGCCTCAGAATTCATTGAAGAT...GTGGAGTGGTGACACGTGCCAGCGGTCACTCTGCCACATCACTTCCTTCTTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
3UTR-3UTR GCA 90 bp TTCTCGGCCAGAGATGAGAAGGCTCCTTTAAACCAAAAATGTCATGGCTCTGCCGCCGTCAGTCATGGCTaGCAACAATTGCCCCATGGC +
Preference number: 2 (lower is better)
Translates to: FSARDEKAPLNQKCHGSAAVSHG*QQLPHG
Trigger: GCCATGGGGCAATTGTTGGCAGCCATGACTGACGGC...GGCAGAGCCATGACATTTTTGGTTTAAAGGAGCCTTCTCATCTCTGGCCGAGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
3UTR-3UTR GCA 90 bp ATGATGACAGGCTGCCAGGCTACCAAGTATCGAAGCCAGTCCAGCAGTTGCCCACGTGGAAGACATGATTaGAGGACAGCCTATACGTGT +
Preference number: 2 (lower is better)
Translates to: MMTGCQATKYRSQSSSCPRGRHD*RTAYTC
Trigger: ACACGTATAGGCTGTCCTGCAATCATGTCTTCCACG...TGGGCAACTGCTGGACTGGCTTCGATACTTGGTAGCCTGGCAGCCTGTCATCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525243.5
ENST00000526549.5
ENST00000530655.5
3UTR-3UTR CCA 90 bp GTCATGGCTGCCAACAATTGCCCCATGGCCCAACTATATGACCTCTATTCTTGGGAGGTCCATGGCGTGTaGGGTGGGTTTTCCACTGAT +
Preference number: 2 (lower is better)
Translates to: VMAANNCPMAQLYDLYSWEVHGV*GGFSTD
Trigger: ATCAGTGGAAAACCCACCCCACACGCCATGGACCTC...CCAAGAATAGAGGTCATATAGTTGGGCCATGGGGCAATTGTTGGCAGCCATGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
3UTR-3UTR CCA 90 bp AGCTCATGGAGCTTTATTCAGACGGGAGTGACAACATCCTGCTTCGTTCTTGCTAGGCCTTCAGCTACCTaGGAGCCCAGCAGTGTTCTC +
Preference number: 2 (lower is better)
Translates to: SSWSFIQTGVTTSCFVLARPSAT*EPSSVL
Trigger: GAGAACACTGCTGGGCTCCCAGGTAGCTGAAGGCCT...AGCAAGAACGAAGCAGGATGTTGTCACTCCCGTCTGAATAAAGCTCCATGAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
3UTR-3UTR CCA 90 bp AAATCTTCAATGAATTCTGAGGCCCCAAGGCTTCCCTTGTTGGCCAAGTCACTGAGGCCTTCAGCTACCTaGGAGCCCAGCAGTGTTCTC +
Preference number: 2 (lower is better)
Translates to: KSSMNSEAPRLPLLAKSLRPSAT*EPSSVL
Trigger: GAGAACACTGCTGGGCTCCCAGGTAGCTGAAGGCCT...CAGTGACTTGGCCAACAAGGGAAGCCTTGGGGCCTCAGAATTCATTGAAGATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
3UTR-3UTR CCA 90 bp TTCTCGGCCAGAGATGAGAAGGCTCCTTTAAACCAAAAATGTCATGGCTCTGCCAGGGGCCGTCAGTCATaGCTGCCAACAATTGCCCCA +
Preference number: 2 (lower is better)
Translates to: FSARDEKAPLNQKCHGSARGRQS*LPTIAP
Trigger: TGGGGCAATTGTTGGCAGCCATGACTGACGGCCCCT...GGCAGAGCCATGACATTTTTGGTTTAAAGGAGCCTTCTCATCTCTGGCCGAGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
3UTR-3UTR CCA 90 bp AAGGCTCCTTTAAACCAAAAATGTCATGGCTCTGCCCCCACCCTGCTTAGGCAGAAGAAGGAAGTGATGTaGCAGAGTGACCGCTGGCAC +
Preference number: 2 (lower is better)
Translates to: KAPLNQKCHGSAPTLLRQKKEVM*QSDRWH
Trigger: GTGCCAGCGGTCACTCTGCCACATCACTTCCTTCTT...CTGCCTAAGCAGGGTGGGGGCAGAGCCATGACATTTTTGGTTTAAAGGAGCCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
3UTR-3UTR TCA 90 bp AGAGATGAGAAGGCTCCTTTAAACCAAAAATGTCATGGCTCTGCCCCCACCCTGGGCCCAGGATGTAGTTaGTGCCTTGGACTACACCAA +
Preference number: 2 (lower is better)
Translates to: RDEKAPLNQKCHGSAPTLGPGCS*CLGLHQ
Trigger: TTGGTGTAGTCCAAGGCATCAACTACATCCTGGGCC...CAGGGTGGGGGCAGAGCCATGACATTTTTGGTTTAAAGGAGCCTTCTCATCTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000393713.7
ENST00000526549.5
3UTR-3UTR GCA 90 bp CCGTCAGTCATGGCTGCCAACAATTGCCCCATGGCCCAACTATATGACCTCTATCTCTTCTATACTAAGTaGACCAGGCTTGAGCCCCAC +
Preference number: 2 (lower is better)
Translates to: PSVMAANNCPMAQLYDLYLFYTK*TRLEPH
Trigger: GTGGGGCTCAAGCCTGGTGCACTTAGTATAGAAGAG...ATAGAGGTCATATAGTTGGGCCATGGGGCAATTGTTGGCAGCCATGACTGACGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
3UTR-3UTR GCA 90 bp ACAGGCTGCCAGGCTACCAAGTATCGAAGCCAGTCCAGCAGTTGCCCATACATGAGAAGAGAAGGGAGATaGCAAAGTCCATGGCATCTT +
Preference number: 2 (lower is better)
Translates to: TGCQATKYRSQSSSCPYMRREGR*QSPWHL
Trigger: AAGATGCCATGGACTTTGGCATCTCCCTTCTCTTCT...CATGTATGGGCAACTGCTGGACTGGCTTCGATACTTGGTAGCCTGGCAGCCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526549.5
ENST00000530655.5
3UTR-3UTR TCA 90 bp GCTTCCCTTGTTGGCCAAGTCACTGATAAGGTTCCACTTGCCTCAACCAGCCTAATCTTCAATGAATTCTaGGGCCCCAAGGCTTCCCTT +
Preference number: 2 (lower is better)
Translates to: ASLVGQVTDKVPLASTSLIFNEF*GPKASL
Trigger: AAGGGAAGCCTTGGGGCCTCAGAATTCATTGAAGAT...TAGGCTGGTTGAGGCAAGTGGAACCTTATCAGTGACTTGGCCAACAAGGGAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
3UTR-3UTR TCA 90 bp ATGCCTTGGACTACACCAATGATGACAGGCTGCCAGGCTACCAAGTATCGAAGCGGGTGGGTTTTCCACTaGTGCTCTTCATCACTATTC +
Preference number: 2 (lower is better)
Translates to: MPWTTPMMTGCQATKYRSGWVFH*CSSSLF
Trigger: GAATAGTGATGAAGAGCATCAGTGGAAAACCCACCC...GCTTCGATACTTGGTAGCCTGGCAGCCTGTCATCATTGGTGTAGTCCAAGGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393713.7
ENST00000525243.5
ENST00000526549.5
3UTR-3UTR GCA 90 bp TGCCCACGGGCGAGTATCCATGGTGCTGATTCTTCCAGTTGTCCCAAAACAAATTCCCTAGAAACCCAATaGCGAAGGCCCATGTTTGAC +
Preference number: 2 (lower is better)
Translates to: CPRASIHGADSSSCPKTNSLETQ*RRPMFD
Trigger: GTCAAACATGGGCCTTCGGCATTGGGTTTCTAGGGA...ATTTGTTTTGGGACAACTGGAAGAATCAGCACCATGGATACTCGCCCGTGGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
3UTR-3UTR CCA 90 bp CAGTTGTCCCAAAACAAATCTTCAATGAATTCTGAGGCCCCAAGGCTTCCCTTGCTCAGTGCTCACCCGTaGCACAAGCCTGAGTACGTT +
Preference number: 2 (lower is better)
Translates to: QLSQNKSSMNSEAPRLPLLSAHP*HKPEYV
Trigger: AACGTACTCAGGCTTGTGCCACGGGTGAGCACTGAG...CAAGGGAAGCCTTGGGGCCTCAGAATTCATTGAAGATTTGTTTTGGGACAACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
3UTR CAA 90 bp TCCCAAAACAAATCTTCAATGAATTCTGAGGCCCCAAGGCTTCCCTaGTTGGCCAAGTCACTGATAAGGTTCCACTTGCCTCAACCAGCC +
Preference number: 2 (lower is better)
Translates to: SQNKSSMNSEAPRLP*LAKSLIRFHLPQPA
Trigger: GGCTGGTTGAGGCAAGTGGAACCTTATCAGTGACTTGGCCAACAAGGGAAGCCTTGGGGCCTCAGAATTCATTGAAGATTTGTTTTGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
3UTR-3UTR GCA 90 bp GTATCCATGGTGCTGATTCTTCCAGTTGTCCCAAAACAAATCTTCAATGAATTCGCTCTGCCCCCACCCTaGTTAGGCAGGGAGGGTGAA +
Preference number: 2 (lower is better)
Translates to: VSMVLILPVVPKQIFNEFALPPP*LGREGE
Trigger: TTCACCCTCCCTGCCTAAGCAGGGTGGGGGCAGAGC...GAATTCATTGAAGATTTGTTTTGGGACAACTGGAAGAATCAGCACCATGGATAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
3UTR-3UTR GCA 90 bp AAATCTTCAATGAATTCTGAGGCCCCAAGGCTTCCCTTGTTGGCCAAGTCACTGCCAATGATGACAGGCTaGCAGGCTACCAAGTATCGA +
Preference number: 2 (lower is better)
Translates to: KSSMNSEAPRLPLLAKSLPMMTG*QATKYR
Trigger: TCGATACTTGGTAGCCTGGCAGCCTGTCATCATTGG...CAGTGACTTGGCCAACAAGGGAAGCCTTGGGGCCTCAGAATTCATTGAAGATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393713.7
ENST00000526549.5
3UTR-3UTR CCA 90 bp GGGCGAGTATCCATGGTGCTGATTCTTCCAGTTGTCCCAAAACAAATCTTCAATCCAGCCTATAGCTCTTaGACAGGGGGAGACAGAGTC +
Preference number: 2 (lower is better)
Translates to: GRVSMVLILPVVPKQIFNPAYSS*TGGDRV
Trigger: GACTCTGTCTCCCCCTGTCCAAGAGCTATAGGCTGG...ATTGAAGATTTGTTTTGGGACAACTGGAAGAATCAGCACCATGGATACTCGCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
3UTR-3UTR CCA 90 bp CAAAACAAATCTTCAATGAATTCTGAGGCCCCAAGGCTTCCCTTGTTGGCCAAGAAGAAGGAAGTGATGTaGCAGAGTGACCGCTGGCAC +
Preference number: 2 (lower is better)
Translates to: QNKSSMNSEAPRLPLLAKKKEVM*QSDRWH
Trigger: GTGCCAGCGGTCACTCTGCCACATCACTTCCTTCTT...CTTGGCCAACAAGGGAAGCCTTGGGGCCTCAGAATTCATTGAAGATTTGTTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
3UTR-3UTR TCA 90 bp TTCTCGGCCAGAGATGAGAAGGCTCCTTTAAACCAAAAATGTCATGGCTCTGCCATCTTCAATGAATTCTaGGGCCCCAAGGCTTCCCTT +
Preference number: 2 (lower is better)
Translates to: FSARDEKAPLNQKCHGSAIFNEF*GPKASL
Trigger: AAGGGAAGCCTTGGGGCCTCAGAATTCATTGAAGAT...GGCAGAGCCATGACATTTTTGGTTTAAAGGAGCCTTCTCATCTCTGGCCGAGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
3UTR-3UTR TCA 90 bp TCATATTCTTCTGCCTCACGTACACACACACACACACACACACACGCATACGCACATGGCCCAACTATATaGCCTCTATTCTTGGCTGAC +
Preference number: 2 (lower is better)
Translates to: SYSSASRTHTHTHTHAYAHGPTI*PLFLAD
Trigger: GTCAGCCAAGAATAGAGGTCATATAGTTGGGCCATG...TGCGTATGCGTGTGTGTGTGTGTGTGTGTGTGTACGTGAGGCAGAAGAATATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
3UTR-3UTR TCA 90 bp CAAAACAAATCTTCAATGAATTCTGAGGCCCCAAGGCTTCCCTTGTTGGCCAAGCTTTCAAGAAGGAAGTaGTGTGGCAGAGTGACCGCT +
Preference number: 2 (lower is better)
Translates to: QNKSSMNSEAPRLPLLAKLSRRK*CGRVTA
Trigger: AGCGGTCACTCTGCCACATCACTTCCTTCTTGAAAG...CTTGGCCAACAAGGGAAGCCTTGGGGCCTCAGAATTCATTGAAGATTTGTTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
3UTR-3UTR TCA 90 bp AGCTCATGGAGCTTTATTCAGACGGGAGTGACAACATCCTGCTTCGTTCTTGCTTTATTCAGACGGGAGTaGCAACATCCTGCTTCGTTC +
Preference number: 2 (lower is better)
Translates to: SSWSFIQTGVTTSCFVLALFRRE*QHPASF
Trigger: GAACGAAGCAGGATGTTGTCACTCCCGTCTGAATAA...AGCAAGAACGAAGCAGGATGTTGTCACTCCCGTCTGAATAAAGCTCCATGAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
3UTR-3UTR GCA 90 bp AGCTCATGGAGCTTTATTCAGACGGGAGTGACAACATCCTGCTTCGTTCTTGCTATGGCTGCCAACAATTaGCCCATGGCCCAACTATAT +
Preference number: 2 (lower is better)
Translates to: SSWSFIQTGVTTSCFVLAMAANN*PMAQLY
Trigger: ATATAGTTGGGCCATGGGGCAATTGTTGGCAGCCAT...AGCAAGAACGAAGCAGGATGTTGTCACTCCCGTCTGAATAAAGCTCCATGAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
3UTR-3UTR GCA 90 bp CAAAACAAATCTTCAATGAATTCTGAGGCCCCAAGGCTTCCCTTGTTGGCCAAGGGAGTGACAACATCCTaGTTCGTTCTTGCTGCCCTT +
Preference number: 2 (lower is better)
Translates to: QNKSSMNSEAPRLPLLAKGVTTS*FVLAAL
Trigger: AAGGGCAGCAAGAACGAAGCAGGATGTTGTCACTCC...CTTGGCCAACAAGGGAAGCCTTGGGGCCTCAGAATTCATTGAAGATTTGTTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
3UTR-3UTR GCA 90 bp CAAAACAAATCTTCAATGAATTCTGAGGCCCCAAGGCTTCCCTTGTTGGCCAAGCCAATGATGACAGGCTaGCAGGCTACCAAGTATCGA +
Preference number: 2 (lower is better)
Translates to: QNKSSMNSEAPRLPLLAKPMMTG*QATKYR
Trigger: TCGATACTTGGTAGCCTGGCAGCCTGTCATCATTGG...CTTGGCCAACAAGGGAAGCCTTGGGGCCTCAGAATTCATTGAAGATTTGTTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393713.7
ENST00000526549.5
3UTR-3UTR CCA 90 bp AGCTCATGGAGCTTTATTCAGACGGGAGTGACAACATCCTGCTTCGTTCTTGCTCCAACAATTGCCCCATaGCCCAACTATATGACCTCT +
Preference number: 2 (lower is better)
Translates to: SSWSFIQTGVTTSCFVLAPTIAP*PNYMTS
Trigger: AGAGGTCATATAGTTGGGCCATGGGGCAATTGTTGG...AGCAAGAACGAAGCAGGATGTTGTCACTCCCGTCTGAATAAAGCTCCATGAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
3UTR CAA 90 bp CAAAACAAATCTTCAATGAATTCTGAGGCCCCAAGGCTTCCCTTGTaGGCCAAGTCACTGATAAGGTTCCACTTGCCTCAACCAGCCTAT +
Preference number: 2 (lower is better)
Translates to: QNKSSMNSEAPRLPL*AKSLIRFHLPQPAY
Trigger: ATAGGCTGGTTGAGGCAAGTGGAACCTTATCAGTGACTTGGCCAACAAGGGAAGCCTTGGGGCCTCAGAATTCATTGAAGATTTGTTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
3UTR-3UTR TCA 90 bp AGCTCATGGAGCTTTATTCAGACGGGAGTGACAACATCCTGCTTCGTTCTTGCTGGGAGGACCCATGAATaGCAAAAATCATGTAGGGAT +
Preference number: 2 (lower is better)
Translates to: SSWSFIQTGVTTSCFVLAGRTHE*QKSCRD
Trigger: ATCCCTACATGATTTTTGTCATTCATGGGTCCTCCC...AGCAAGAACGAAGCAGGATGTTGTCACTCCCGTCTGAATAAAGCTCCATGAGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
3UTR-3UTR GCA 90 bp TCATATTCTTCTGCCTCACGTACACACACACACACACACACACACGCATACGCAAGAAGAGAAGGGAGATaGCAAAGTCCATGGCATCTT +
Preference number: 2 (lower is better)
Translates to: SYSSASRTHTHTHTHAYARREGR*QSPWHL
Trigger: AAGATGCCATGGACTTTGGCATCTCCCTTCTCTTCT...TGCGTATGCGTGTGTGTGTGTGTGTGTGTGTGTACGTGAGGCAGAAGAATATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526549.5
3UTR-3UTR TCA 90 bp TTCTTCCAGTTGTCCCAAAACAAATCTTCAATGAATTCTGAGGCCCCAAGGCTTCATGGCCCAACTATATaGCCTCTATTCTTGGCTGAC +
Preference number: 2 (lower is better)
Translates to: FFQLSQNKSSMNSEAPRLHGPTI*PLFLAD
Trigger: GTCAGCCAAGAATAGAGGTCATATAGTTGGGCCATG...AAGCCTTGGGGCCTCAGAATTCATTGAAGATTTGTTTTGGGACAACTGGAAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
3UTR-3UTR GCA 90 bp GTATCCATGGTGCTGATTCTTCCAGTTGTCCCAAAACAAATCTTCAATGAATTCCTCTTCTATACTAAGTaGACCAGGCTTGAGCCCCAC +
Preference number: 2 (lower is better)
Translates to: VSMVLILPVVPKQIFNEFLFYTK*TRLEPH
Trigger: GTGGGGCTCAAGCCTGGTGCACTTAGTATAGAAGAG...GAATTCATTGAAGATTTGTTTTGGGACAACTGGAAGAATCAGCACCATGGATAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
3UTR-3UTR GCA 90 bp GTATCCATGGTGCTGATTCTTCCAGTTGTCCCAAAACAAATCTTCAATGAATTCTCCCTAGAAACCCAATaGCGAAGGCCCATGTTTGAC +
Preference number: 2 (lower is better)
Translates to: VSMVLILPVVPKQIFNEFSLETQ*RRPMFD
Trigger: GTCAAACATGGGCCTTCGGCATTGGGTTTCTAGGGA...GAATTCATTGAAGATTTGTTTTGGGACAACTGGAAGAATCAGCACCATGGATAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
3UTR-3UTR CAA 90 bp CAGGGAGGAGAGTGCCCTGAGGTCCATGGCGTGTGGGGTGGGTTTTCCACTGATGGCCTCTCCCAGGGATaGCTGAACATCCTCTTGAGG +
Preference number: 3 (lower is better)
Translates to: QGGECPEVHGVWGGFSTDGLSQG*LNILLR
Trigger: CCTCAAGAGGATGTTCAGCAATCCCTGGGAGAGGCC...ATCAGTGGAAAACCCACCCCACACGCCATGGACCTCAGGGCACTCTCCTCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393713.7
ENST00000525243.5
ENST00000526549.5
3UTR-3UTR CAA 90 bp ACGGGAGTGACAACATCCTGCTTCGTTCTTGCTGCCCTTGAAGGGGCAGGCCCTGCCCCAAGGCTTCCCTaGTTGGCCAAGTCACTGATA +
Preference number: 3 (lower is better)
Translates to: TGVTTSCFVLAALEGAGPAPRLP*LAKSLI
Trigger: TATCAGTGACTTGGCCAACAAGGGAAGCCTTGGGGC...AGGGCCTGCCCCTTCAAGGGCAGCAAGAACGAAGCAGGATGTTGTCACTCCCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
3UTR-3UTR CAA 90 bp TGGCACAAGCCTGAGTACGTTAGCTCTTCTATACTAAGTGCACCAGGCTTGAGCCACCCACCACTCCCGTaGTCAGGCCCAGGGAGGACC +
Preference number: 3 (lower is better)
Translates to: WHKPEYVSSSILSAPGLSHPPLP*SGPGRT
Trigger: GGTCCTCCCTGGGCCTGACAACGGGAGTGGTGGGTG...GCTCAAGCCTGGTGCACTTAGTATAGAAGAGCTAACGTACTCAGGCTTGTGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
3UTR-3UTR CAA 90 bp AGCTCATGGAGCTTTATTCAGACGGGAGTGACAACATCCTGCTTCGTTCTTGCTCACCCACCACTCCCGTaGTCAGGCCCAGGGAGGACC +
Preference number: 3 (lower is better)
Translates to: SSWSFIQTGVTTSCFVLAHPPLP*SGPGRT
Trigger: GGTCCTCCCTGGGCCTGACAACGGGAGTGGTGGGTG...AGCAAGAACGAAGCAGGATGTTGTCACTCCCGTCTGAATAAAGCTCCATGAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
3UTR-3UTR CAA 90 bp GCGTGTGGGGTGGGTTTTCCACTGATGCTCTTCATCACTATTCCAGGCCCAGGAGGCCTCTCCCAGGGATaGCTGAACATCCTCTTGAGG +
Preference number: 3 (lower is better)
Translates to: ACGVGFPLMLFITIPGPGGLSQG*LNILLR
Trigger: CCTCAAGAGGATGTTCAGCAATCCCTGGGAGAGGCC...TCCTGGGCCTGGAATAGTGATGAAGAGCATCAGTGGAAAACCCACCCCACACGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393713.7
ENST00000525243.5
ENST00000526549.5
3UTR-3UTR CAA 90 bp CCTTGGACTACACCAATGATGACAGGCTGCCAGGCTACCAAGTATCGAAGCCAGGGCCTCTCCCAGGGATaGCTGAACATCCTCTTGAGG +
Preference number: 3 (lower is better)
Translates to: PWTTPMMTGCQATKYRSQGLSQG*LNILLR
Trigger: CCTCAAGAGGATGTTCAGCAATCCCTGGGAGAGGCC...CTGGCTTCGATACTTGGTAGCCTGGCAGCCTGTCATCATTGGTGTAGTCCAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393713.7
ENST00000525243.5
ENST00000526549.5
3UTR-3UTR CAA 90 bp TTTGCAGTAGGGACACGTTTGCTTCTTTCCCACGATGCACCAGCCACGGATGCAGGCCTCTCCCAGGGATaGCTGAACATCCTCTTGAGG +
Preference number: 3 (lower is better)
Translates to: FAVGTRLLLSHDAPATDAGLSQG*LNILLR
Trigger: CCTCAAGAGGATGTTCAGCAATCCCTGGGAGAGGCC...TGCATCCGTGGCTGGTGCATCGTGGGAAAGAAGCAAACGTGTCCCTACTGCAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525243.5
ENST00000526549.5
ENST00000530655.5
3UTR-3UTR CAA 90 bp ATGACAGGCTGCCAGGCTACCAAGTATCGAAGCCAGTCCAGCAGTTGCCCATACAAGCCAGTCCAGCAGTaGCCCATACATGACGTGAGG +
Preference number: 3 (lower is better)
Translates to: MTGCQATKYRSQSSSCPYKPVQQ*PIHDVR
Trigger: CCTCACGTCATGTATGGGCAACTGCTGGACTGGCTT...GTATGGGCAACTGCTGGACTGGCTTCGATACTTGGTAGCCTGGCAGCCTGTCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393713.7
ENST00000525243.5
ENST00000526549.5
ENST00000530655.5
3UTR-3UTR CAA 90 bp AGGGAGGACACCTGGGGCCTCAGTGCTCACCCGTGGCACAAGCCTGAGTACGTTGATGTAGTTGATGCCTaGGACTACACCAATGATGAC +
Preference number: 3 (lower is better)
Translates to: REDTWGLSAHPWHKPEYVDVVDA*DYTNDD
Trigger: GTCATCATTGGTGTAGTCCAAGGCATCAACTACATC...AACGTACTCAGGCTTGTGCCACGGGTGAGCACTGAGGCCCCAGGTGTCCTCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393713.7
ENST00000526549.5
3UTR TCA 72 bp ACGTGTCACCACTCCACTGAAGGATCCACTGAAGAATaGGCTTGCACAAGGGGCCGTCAGTCATGGCTGCCA +
Preference number: 3 (lower is better)
Translates to: TCHHSTEGSTEE*ACTRGRQSWLP
Trigger: TGGCAGCCATGACTGACGGCCCCTTGTGCAAGCTCATTCTTCAGTGGATCCTTCAGTGGAGTGGTGACACGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
3UTR-3UTR CAA 90 bp TACCAAGTATCGAAGCCAGTCCAGCAGTTGCCCATACATGACGTGAGGCCTCTCAAGCCAGTCCAGCAGTaGCCCATACATGACGTGAGG +
Preference number: 3 (lower is better)
Translates to: YQVSKPVQQLPIHDVRPLKPVQQ*PIHDVR
Trigger: CCTCACGTCATGTATGGGCAACTGCTGGACTGGCTT...GAGAGGCCTCACGTCATGTATGGGCAACTGCTGGACTGGCTTCGATACTTGGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393713.7
ENST00000525243.5
ENST00000526549.5
ENST00000530655.5
3UTR-3UTR CAA 90 bp ATGATGACAGGCTGCCAGGCTACCAAGTATCGAAGCCAGTCCAGCAGTTGCCCAGCAGTAGGGACACGTTaGCTTCTTTCCCACGATGCA +
Preference number: 3 (lower is better)
Translates to: MMTGCQATKYRSQSSSCPAVGTR*LLSHDA
Trigger: TGCATCGTGGGAAAGAAGCAAACGTGTCCCTACTGC...TGGGCAACTGCTGGACTGGCTTCGATACTTGGTAGCCTGGCAGCCTGTCATCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525243.5
ENST00000526549.5
ENST00000530655.5
3UTR TCA 72 bp ACACGCATACGCACTCTTAGGCTTTCAAGAAGGAAGTaGTGTGGCAGAGTGACCGCTGGCACGTGTCACCAC +
Preference number: 3 (lower is better)
Translates to: TRIRTLRLSRRK*CGRVTAGTCHH
Trigger: GTGGTGACACGTGCCAGCGGTCACTCTGCCACATCACTTCCTTCTTGAAAGCCTAAGAGTGCGTATGCGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
3UTR TCA 72 bp CCACTCCCGTTGTCAGGCCCAGGGAGGACCCATGAATaGCAAAAATCATGTAGGGATATTCCCTGGACTGGG +
Preference number: 3 (lower is better)
Translates to: PLPLSGPGRTHE*QKSCRDIPWTG
Trigger: CCCAGTCCAGGGAATATCCCTACATGATTTTTGTCATTCATGGGTCCTCCCTGGGCCTGACAACGGGAGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
3UTR GCA 72 bp TCATGGAGCTTTATTCAGACGGGAGTGACAACATCCTaGTTCGTTCTTGCTGCCCTTGAAGGGGCAGGCCCT +
Preference number: 3 (lower is better)
Translates to: SWSFIQTGVTTS*FVLAALEGAGP
Trigger: AGGGCCTGCCCCTTCAAGGGCAGCAAGAACGAAGCAGGATGTTGTCACTCCCGTCTGAATAAAGCTCCATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
3UTR GCA 72 bp ACGTTTGCTTCTTTCCCACGATGCACCAGCCACGGATaGAGAACTCGTGGAAGACATGATTGCAGGACAGCC +
Preference number: 3 (lower is better)
Translates to: TFASFPRCTSHG*RTRGRHDCRTA
Trigger: GGCTGTCCTGCAATCATGTCTTCCACGAGTTCTGCATCCGTGGCTGGTGCATCGTGGGAAAGAAGCAAACGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525243.5
ENST00000526549.5
ENST00000530655.5
3UTR-3UTR CAA 90 bp TGCCCACGGGCGAGTATCCATGGTGCTGATTCTTCCAGTTGTCCCAAAACAAATCATCCTGCTTCGTTCTaGCTGCCCTTGAAGGGGCAG +
Preference number: 3 (lower is better)
Translates to: CPRASIHGADSSSCPKTNHPASF*LPLKGQ
Trigger: CTGCCCCTTCAAGGGCAGCAAGAACGAAGCAGGATG...ATTTGTTTTGGGACAACTGGAAGAATCAGCACCATGGATACTCGCCCGTGGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
3UTR TCA 72 bp GCTACCTGGGAGCCCAGCAGTGTTCTCGGCCAGAGATaGGAAGGCTCCTTTAAACCAAAAATGTCATGGCTC +
Preference number: 3 (lower is better)
Translates to: ATWEPSSVLGQR*EGSFKPKMSWL
Trigger: GAGCCATGACATTTTTGGTTTAAAGGAGCCTTCTCATCTCTGGCCGAGAACACTGCTGGGCTCCCAGGTAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
3UTR TCA 72 bp CTCTTAGGCTTTCAAGAAGGAAGTGATGTGGCAGAGTaGCCGCTGGCACGTGTCACCACTCCACTGAAGGAT +
Preference number: 3 (lower is better)
Translates to: LLGFQEGSDVAE*PLARVTTPLKD
Trigger: ATCCTTCAGTGGAGTGGTGACACGTGCCAGCGGTCACTCTGCCACATCACTTCCTTCTTGAAAGCCTAAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
3UTR GCA 72 bp TTGCACAAGGGGCCGTCAGTCATGGCTGCCAACAATTaGCCCATGGCCCAACTATATGACCTCTATTCTTGG +
Preference number: 3 (lower is better)
Translates to: LHKGPSVMAANN*PMAQLYDLYSW
Trigger: CCAAGAATAGAGGTCATATAGTTGGGCCATGGGGCAATTGTTGGCAGCCATGACTGACGGCCCCTTGTGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
3UTR CCA 72 bp ATAAGGTTCCACTTGCCTCAACCAGCCTATAGCTCTTaGACAGGGGGAGACAGAGTCAGACGCAACACCTGT +
Preference number: 3 (lower is better)
Translates to: IRFHLPQPAYSS*TGGDRVRRNTC
Trigger: ACAGGTGTTGCGTCTGACTCTGTCTCCCCCTGTCCAAGAGCTATAGGCTGGTTGAGGCAAGTGGAACCTTAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
3UTR-3UTR CAA 90 bp GCCAACAATTGCCCCATGGCCCAACTATATGACCTCTATTCTTGGCTGACCACAGCCCCAAGGCTTCCCTaGTTGGCCAAGTCACTGATA +
Preference number: 3 (lower is better)
Translates to: ANNCPMAQLYDLYSWLTTAPRLP*LAKSLI
Trigger: TATCAGTGACTTGGCCAACAAGGGAAGCCTTGGGGC...TGTGGTCAGCCAAGAATAGAGGTCATATAGTTGGGCCATGGGGCAATTGTTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
3UTR-3UTR CAA 90 bp AGCTCATGGAGCTTTATTCAGACGGGAGTGACAACATCCTGCTTCGTTCTTGCTCATCCTGCTTCGTTCTaGCTGCCCTTGAAGGGGCAG +
Preference number: 3 (lower is better)
Translates to: SSWSFIQTGVTTSCFVLAHPASF*LPLKGQ
Trigger: CTGCCCCTTCAAGGGCAGCAAGAACGAAGCAGGATG...AGCAAGAACGAAGCAGGATGTTGTCACTCCCGTCTGAATAAAGCTCCATGAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
3UTR-3UTR CAA 90 bp CCAATGATGACAGGCTGCCAGGCTACCAAGTATCGAAGCCAGTCCAGCAGTTGCGATGTAGTTGATGCCTaGGACTACACCAATGATGAC +
Preference number: 3 (lower is better)
Translates to: PMMTGCQATKYRSQSSSCDVVDA*DYTNDD
Trigger: GTCATCATTGGTGTAGTCCAAGGCATCAACTACATC...GCAACTGCTGGACTGGCTTCGATACTTGGTAGCCTGGCAGCCTGTCATCATTGG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393713.7
ENST00000525243.5
ENST00000526549.5
3UTR-3UTR CAA 90 bp CTGCCAGGCTACCAAGTATCGAAGCCAGTCCAGCAGTTGCCCATACATGACGTGGATGTAGTTGATGCCTaGGACTACACCAATGATGAC +
Preference number: 3 (lower is better)
Translates to: LPGYQVSKPVQQLPIHDVDVVDA*DYTNDD
Trigger: GTCATCATTGGTGTAGTCCAAGGCATCAACTACATC...CACGTCATGTATGGGCAACTGCTGGACTGGCTTCGATACTTGGTAGCCTGGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393713.7
ENST00000525243.5
ENST00000526549.5
3UTR TCA 72 bp ACCACAGCCCTGCCCACGGGCGAGTATCCATGGTGCTaGTTCTTCCAGTTGTCCCAAAACAAATCTTCAATG +
Preference number: 3 (lower is better)
Translates to: TTALPTGEYPWC*FFQLSQNKSSM
Trigger: CATTGAAGATTTGTTTTGGGACAACTGGAAGAATCAGCACCATGGATACTCGCCCGTGGGCAGGGCTGTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
3UTR TCA 72 bp AAAGATCTGCTGCCCACACACAGCACACACACTGTCTaGAAGATGTTTGGTAGGCATGCCCGACTCGCTGTA +
Preference number: 3 (lower is better)
Translates to: KDLLPTHSTHTV*KMFGRHARLAV
Trigger: TACAGCGAGTCGGGCATGCCTACCAAACATCTTTCAGACAGTGTGTGTGCTGTGTGTGGGCAGCAGATCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526549.5
ENST00000530655.5
3UTR GCA 72 bp GCAGGCCCTACTGAGCCATATTCCCTAGAAACCCAATaGCGAAGGCCCATGTTTGACCTCCCACTTTATTCA +
Preference number: 3 (lower is better)
Translates to: AGPTEPYSLETQ*RRPMFDLPLYS
Trigger: TGAATAAAGTGGGAGGTCAAACATGGGCCTTCGGCATTGGGTTTCTAGGGAATATGGCTCAGTAGGGCCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
3UTR-3UTR CAA 90 bp GCCAACAATTGCCCCATGGCCCAACTATATGACCTCTATTCTTGGCTGACCACACTGATAAGGTTCCACTaGCCTCAACCAGCCTATAGC +
Preference number: 3 (lower is better)
Translates to: ANNCPMAQLYDLYSWLTTLIRFH*PQPAYS
Trigger: GCTATAGGCTGGTTGAGGCAAGTGGAACCTTATCAG...TGTGGTCAGCCAAGAATAGAGGTCATATAGTTGGGCCATGGGGCAATTGTTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
3UTR-3UTR CAA 90 bp TGGACTACACCAATGATGACAGGCTGCCAGGCTACCAAGTATCGAAGCCAGTCCTTGCTGAACATCCTCTaGAGGTCTACCTTCTCTTTG +
Preference number: 3 (lower is better)
Translates to: WTTPMMTGCQATKYRSQSLLNIL*RSTFSL
Trigger: CAAAGAGAAGGTAGACCTCAAGAGGATGTTCAGCAA...GGACTGGCTTCGATACTTGGTAGCCTGGCAGCCTGTCATCATTGGTGTAGTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525243.5
ENST00000526549.5
3UTR GCA 72 bp ATGATCCCCTCTTCACTGACGTCCACAAAGATCTGCTaGCCACACACAGCACACACACTGTCTGAAAGATGT +
Preference number: 3 (lower is better)
Translates to: MIPSSLTSTKIC*PHTAHTLSERC
Trigger: ACATCTTTCAGACAGTGTGTGTGCTGTGTGTGGGCAGCAGATCTTTGTGGACGTCAGTGAAGAGGGGATCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526549.5
ENST00000530655.5
3UTR GCA 72 bp TCAATGATCCCCTCTTCACTGACGTCCACAAAGATCTaGTGCCCACACACAGCACACACACTGTCTGAAAGA +
Preference number: 3 (lower is better)
Translates to: SMIPSSLTSTKI*CPHTAHTLSER
Trigger: TCTTTCAGACAGTGTGTGTGCTGTGTGTGGGCAGCAGATCTTTGTGGACGTCAGTGAAGAGGGGATCATTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526549.5
ENST00000530655.5
3UTR-3UTR CAA 90 bp CGGGCGAGTATCCATGGTGCTGATTCTTCCAGTTGTCCCAAAACAAATCTTCAACTGTCTGAAAGATGTTaGGTAGGCATGCCCGACTCG +
Preference number: 3 (lower is better)
Translates to: RASIHGADSSSCPKTNLQLSERC*VGMPDS
Trigger: CGAGTCGGGCATGCCTACCAAACATCTTTCAGACAG...TTGAAGATTTGTTTTGGGACAACTGGAAGAATCAGCACCATGGATACTCGCCCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526549.5
3UTR TCA 72 bp CTGGGAATCCCCTGCCAGCTTCAAGGACATATCATCTaGCACAGGGAGAAGCTGACATCTGTCATATTCTTC +
Preference number: 3 (lower is better)
Translates to: LGIPCQLQGHII*HREKLTSVIFF
Trigger: GAAGAATATGACAGATGTCAGCTTCTCCCTGTGTCAGATGATATGTCCTTGAAGCTGGCAGGGGATTCCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
3UTR-3UTR CAA 90 bp GGGCGAGTATCCATGGTGCTGATTCTTCCAGTTGTCCCAAAACAAATCTTCAATCATGGCTGCCAACAATaGCCCCATGGCCCAACTATA +
Preference number: 3 (lower is better)
Translates to: GRVSMVLILPVVPKQIFNHGCQQ*PHGPTI
Trigger: TATAGTTGGGCCATGGGGCAATTGTTGGCAGCCATG...ATTGAAGATTTGTTTTGGGACAACTGGAAGAATCAGCACCATGGATACTCGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
3UTR-3UTR CAA 90 bp GTAGTTGATGCCTTGGACTACACCAATGATGACAGGCTGCCAGGCTACCAAGTAAAACCAACCTTGGGGTaGTCTGTACTAGAGGTTTTC +
Preference number: 3 (lower is better)
Translates to: VVDALDYTNDDRLPGYQVKPTLG*SVLEVF
Trigger: GAAAACCTCTAGTACAGACAACCCCAAGGTTGGTTT...TACTTGGTAGCCTGGCAGCCTGTCATCATTGGTGTAGTCCAAGGCATCAACTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000526549.5
3UTR-3UTR CAA 90 bp CACAAGCCTGAGTACGTTAGCTCTTCTATACTAAGTGCACCAGGCTTGAGCCCCACTTATAAACCAACCTaGGGGTTGTCTGTACTAGAG +
Preference number: 3 (lower is better)
Translates to: HKPEYVSSSILSAPGLSPTYKPT*GLSVLE
Trigger: CTCTAGTACAGACAACCCCAAGGTTGGTTTATAAGT...GGGGCTCAAGCCTGGTGCACTTAGTATAGAAGAGCTAACGTACTCAGGCTTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526549.5
3UTR-3UTR CAA 90 bp GTATCCATGGTGCTGATTCTTCCAGTTGTCCCAAAACAAATCTTCAATGAATTCCATCCTGCTTCGTTCTaGCTGCCCTTGAAGGGGCAG +
Preference number: 3 (lower is better)
Translates to: VSMVLILPVVPKQIFNEFHPASF*LPLKGQ
Trigger: CTGCCCCTTCAAGGGCAGCAAGAACGAAGCAGGATG...GAATTCATTGAAGATTTGTTTTGGGACAACTGGAAGAATCAGCACCATGGATAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
3UTR-3UTR CAA 90 bp TTCTCGGCCAGAGATGAGAAGGCTCCTTTAAACCAAAAATGTCATGGCTCTGCCTTGCTGAACATCCTCTaGAGGTCTACCTTCTCTTTG +
Preference number: 3 (lower is better)
Translates to: FSARDEKAPLNQKCHGSALLNIL*RSTFSL
Trigger: CAAAGAGAAGGTAGACCTCAAGAGGATGTTCAGCAA...GGCAGAGCCATGACATTTTTGGTTTAAAGGAGCCTTCTCATCTCTGGCCGAGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000526549.5
3UTR TCA 72 bp CTTCCAGTTGTCCCAAAACAAATCTTCAATGAATTCTaGGGCCCCAAGGCTTCCCTTGTTGGCCAAGTCACT +
Preference number: 3 (lower is better)
Translates to: LPVVPKQIFNEF*GPKASLVGQVT
Trigger: AGTGACTTGGCCAACAAGGGAAGCCTTGGGGCCTCAGAATTCATTGAAGATTTGTTTTGGGACAACTGGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
3UTR TCA 72 bp GCTGATTCTTCCAGTTGTCCCAAAACAAATCTTCAATaGATTCTGAGGCCCCAAGGCTTCCCTTGTTGGCCA +
Preference number: 3 (lower is better)
Translates to: ADSSSCPKTNLQ*ILRPQGFPCWP
Trigger: TGGCCAACAAGGGAAGCCTTGGGGCCTCAGAATTCATTGAAGATTTGTTTTGGGACAACTGGAAGAATCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
3UTR-3UTR CAA 90 bp GTATCCATGGTGCTGATTCTTCCAGTTGTCCCAAAACAAATCTTCAATGAATTCGCCCCAAGGCTTCCCTaGTTGGCCAAGTCACTGATA +
Preference number: 3 (lower is better)
Translates to: VSMVLILPVVPKQIFNEFAPRLP*LAKSLI
Trigger: TATCAGTGACTTGGCCAACAAGGGAAGCCTTGGGGC...GAATTCATTGAAGATTTGTTTTGGGACAACTGGAAGAATCAGCACCATGGATAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
CDS-3UTR TCA 90 bp CGACACAGCCAGAGGGGTCCTGAGTGGCCCAAGCACCCCTTTGAGTCTTTCCCAGGGAGGAGAGTGCCCTaGGGTCCATGGCGTGTGGGG +
Preference number: 4 (lower is better)
Translates to: RHSQRGPEWPKHPFESFPGRRVP*GPWRVG
Trigger: CCCCACACGCCATGGACCTCAGGGCACTCTCCTCCC...TGGGAAAGACTCAAAGGGGTGCTTGGGCCACTCAGGACCCCTCTGGCTGTGTCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
ENST00000533380.5
CDS-3UTR TCA 90 bp CCATCATATCCCTCCCCAGTCCGACACAGCCAGAGGGGTCCTGAGTGGCCCAAGCAGCCAGAGGGGTCCTaGGTGGCCCAAGCACCCCTT +
Preference number: 4 (lower is better)
Translates to: PSYPSPVRHSQRGPEWPKQPEGS*VAQAPL
Trigger: AAGGGGTGCTTGGGCCACTCAGGACCCCTCTGGCTG...CTTGGGCCACTCAGGACCCCTCTGGCTGTGTCGGACTGGGGAGGGATATGATGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
ENST00000533380.5
CDS-3UTR TCA 90 bp GGCAGGGAGGAGAGTGCCCTGAGGTCCATGGCGTGTGGGGTGGGTTTTCCACTGGCCCAAGCACCCCTTTaGGTCTTTCCCACCCAGGAG +
Preference number: 4 (lower is better)
Translates to: GREESALRSMACGVGFPLAQAPL*VFPTQE
Trigger: CTCCTGGGTGGGAAAGACTCAAAGGGGTGCTTGGGC...CAGTGGAAAACCCACCCCACACGCCATGGACCTCAGGGCACTCTCCTCCCTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
ENST00000533380.5
CDS-3UTR GCA 90 bp CTTTGTGGGCAGGGAGGAGAGTGCCCTGAGGTCCATGGCGTGTGGGGTGGGTTTGGTGCTTGGCATGCATaGGTGCGTGCTCGACCCTCC +
Preference number: 4 (lower is better)
Translates to: LCGQGGECPEVHGVWGGFGAWHA*VRARPS
Trigger: GGAGGGTCGAGCACGCACGCATGCATGCCAAGCACC...AAACCCACCCCACACGCCATGGACCTCAGGGCACTCTCCTCCCTGCCCACAAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361756.8
ENST00000525243.5
CDS-3UTR GCA 90 bp GGCAGGGAGGAGAGTGCCCTGAGGTCCATGGCGTGTGGGGTGGGTTTTCCACTGGCTTCATGGCCACGGTaGTTGGCATGCATGCGTGCG +
Preference number: 4 (lower is better)
Translates to: GREESALRSMACGVGFPLASWPR*LACMRA
Trigger: CGCACGCATGCATGCCAAGCACCGTGGCCATGAAGC...CAGTGGAAAACCCACCCCACACGCCATGGACCTCAGGGCACTCTCCTCCCTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000525243.5
ENST00000526549.5
ENST00000530137.1
ENST00000533380.5
CDS-3UTR GCA 90 bp CCATCATATCCCTCCCCAGTCCGACACAGCCAGAGGGGTCCTGAGTGGCCCAAGGAGCGTGGGTGCCTCTaGTTCCACTGCACCAGGAGC +
Preference number: 4 (lower is better)
Translates to: PSYPSPVRHSQRGPEWPKERGCL*FHCTRS
Trigger: GCTCCTGGTGCAGTGGAAGCAGAGGCACCCACGCTC...CTTGGGCCACTCAGGACCCCTCTGGCTGTGTCGGACTGGGGAGGGATATGATGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
ENST00000533380.5
CDS-3UTR GCA 90 bp CAGGGAGGAGAGTGCCCTGAGGTCCATGGCGTGTGGGGTGGGTTTTCCACTGATGGGCAGGGAGGAGAGTaGCCTGAGGTCCATGGCGTG +
Preference number: 4 (lower is better)
Translates to: QGGECPEVHGVWGGFSTDGQGGE*PEVHGV
Trigger: CACGCCATGGACCTCAGGGCACTCTCCTCCCTGCCC...ATCAGTGGAAAACCCACCCCACACGCCATGGACCTCAGGGCACTCTCCTCCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000525243.5
ENST00000526549.5
ENST00000530137.1
ENST00000533380.5
CDS-3UTR GCA 90 bp CCATCATATCCCTCCCCAGTCCGACACAGCCAGAGGGGTCCTGAGTGGCCCAAGGCTCTGCCCCCACCCTaGTTAGGCAGGGAGGGTGAA +
Preference number: 4 (lower is better)
Translates to: PSYPSPVRHSQRGPEWPKALPPP*LGREGE
Trigger: TTCACCCTCCCTGCCTAAGCAGGGTGGGGGCAGAGC...CTTGGGCCACTCAGGACCCCTCTGGCTGTGTCGGACTGGGGAGGGATATGATGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
CDS-3UTR GCA 90 bp GTCCGACACAGCCAGAGGGGTCCTGAGTGGCCCAAGCACCCCTTTGAGTCTTTCCACCTGGGGCCTCAGTaGTCACCCGTGGCACAAGCC +
Preference number: 4 (lower is better)
Translates to: VRHSQRGPEWPKHPFESFHLGPQ*SPVAQA
Trigger: GGCTTGTGCCACGGGTGAGCACTGAGGCCCCAGGTG...GAAAGACTCAAAGGGGTGCTTGGGCCACTCAGGACCCCTCTGGCTGTGTCGGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
CDS-3UTR GCA 90 bp GGCAGGGAGGAGAGTGCCCTGAGGTCCATGGCGTGTGGGGTGGGTTTTCCACTGGGTGCTTGGCATGCATaGGTGCGTGCTCGACCCTCA +
Preference number: 4 (lower is better)
Translates to: GREESALRSMACGVGFPLGAWHA*VRARPS
Trigger: TGAGGGTCGAGCACGCACGCATGCATGCCAAGCACC...CAGTGGAAAACCCACCCCACACGCCATGGACCTCAGGGCACTCTCCTCCCTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
ENST00000533380.5
CDS-3UTR CCA 90 bp TCATATCCCTCCCCAGTCCGACACAGCCAGAGGGGTCCTGAGTGGCCCAAGCACTGCACCAGGAGCAGCTaGGCCACCACCAAGGTTGCG +
Preference number: 4 (lower is better)
Translates to: SYPSPVRHSQRGPEWPKHCTRSS*ATTKVA
Trigger: CGCAACCTTGGTGGTGGCCCAGCTGCTCCTGGTGCA...GTGCTTGGGCCACTCAGGACCCCTCTGGCTGTGTCGGACTGGGGAGGGATATGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
ENST00000533380.5
CDS-3UTR CCA 90 bp CCATCATATCCCTCCCCAGTCCGACACAGCCAGAGGGGTCCTGAGTGGCCCAAGCCCAGGAGGTCTTTGTaGGCAGGGAGGAGAGTGCCC +
Preference number: 4 (lower is better)
Translates to: PSYPSPVRHSQRGPEWPKPRRSL*AGRRVP
Trigger: GGGCACTCTCCTCCCTGCCCACAAAGACCTCCTGGG...CTTGGGCCACTCAGGACCCCTCTGGCTGTGTCGGACTGGGGAGGGATATGATGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
ENST00000533380.5
CDS-3UTR CCA 90 bp ACGGGAGTGACAACATCCTGCTTCGTTCTTGCTGCCCTTGAAGGGGCAGGCCCTGGGAGGGAGGACACCTaGGGCCTCAGTGCTCACCCG +
Preference number: 4 (lower is better)
Translates to: TGVTTSCFVLAALEGAGPGREDT*GLSAHP
Trigger: CGGGTGAGCACTGAGGCCCCAGGTGTCCTCCCTCCC...AGGGCCTGCCCCTTCAAGGGCAGCAAGAACGAAGCAGGATGTTGTCACTCCCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
CDS-3UTR TCA 90 bp AGGGAGGACACCTGGGGCCTCAGTGCTCACCCGTGGCACAAGCCTGAGTACGTTGCAGTTGCCCATACATaGCGTGAGGCCTCTCCCAGG +
Preference number: 4 (lower is better)
Translates to: REDTWGLSAHPWHKPEYVAVAHT*REASPR
Trigger: CCTGGGAGAGGCCTCACGTCATGTATGGGCAACTGC...AACGTACTCAGGCTTGTGCCACGGGTGAGCACTGAGGCCCCAGGTGTCCTCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
CDS-3UTR TCA 90 bp CCATCATATCCCTCCCCAGTCCGACACAGCCAGAGGGGTCCTGAGTGGCCCAAGGCAGTTGCCCATACATaGCGTGAGGCCTCTCCCAGG +
Preference number: 4 (lower is better)
Translates to: PSYPSPVRHSQRGPEWPKAVAHT*REASPR
Trigger: CCTGGGAGAGGCCTCACGTCATGTATGGGCAACTGC...CTTGGGCCACTCAGGACCCCTCTGGCTGTGTCGGACTGGGGAGGGATATGATGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
ENST00000533380.5
CDS-3UTR TCA 90 bp AGTGGCCCAAGCACCCCTTTGAGTCTTTCCCACCCAGGAGGTCTTTGTGGGCAGAGGGAGTGGGTGGGCTaGGGCCTTCAGCTACCTGGG +
Preference number: 4 (lower is better)
Translates to: SGPSTPLSLSHPGGLCGQREWVG*GLQLPG
Trigger: CCCAGGTAGCTGAAGGCCTCAGCCCACCCACTCCCT...CTGCCCACAAAGACCTCCTGGGTGGGAAAGACTCAAAGGGGTGCTTGGGCCACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
CDS-3UTR TCA 90 bp TCATATCCCTCCCCAGTCCGACACAGCCAGAGGGGTCCTGAGTGGCCCAAGCACACCTCTATTCTTGGCTaGCCACAGCCCTGCCCACGG +
Preference number: 4 (lower is better)
Translates to: SYPSPVRHSQRGPEWPKHTSILG*PQPCPR
Trigger: CCGTGGGCAGGGCTGTGGTCAGCCAAGAATAGAGGT...GTGCTTGGGCCACTCAGGACCCCTCTGGCTGTGTCGGACTGGGGAGGGATATGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
CDS-3UTR GCA 90 bp GGGGTCCTGAGTGGCCCAAGCACCCCTTTGAGTCTTTCCCACCCAGGAGGTCTTCCACGGTGCTTGGCATaGATGCGTGCGTGCTCGACC +
Preference number: 4 (lower is better)
Translates to: GVLSGPSTPLSLSHPGGLPRCLA*MRACST
Trigger: GGTCGAGCACGCACGCATGCATGCCAAGCACCGTGG...AAGACCTCCTGGGTGGGAAAGACTCAAAGGGGTGCTTGGGCCACTCAGGACCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
ENST00000533380.5
CDS-3UTR GCA 90 bp CAGGGAGGAGAGTGCCCTGAGGTCCATGGCGTGTGGGGTGGGTTTTCCACTGATGAGCGTGGGTGCCTCTaGTTCCACTGCACCAGGAGC +
Preference number: 4 (lower is better)
Translates to: QGGECPEVHGVWGGFSTDERGCL*FHCTRS
Trigger: GCTCCTGGTGCAGTGGAAGCAGAGGCACCCACGCTC...ATCAGTGGAAAACCCACCCCACACGCCATGGACCTCAGGGCACTCTCCTCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000525243.5
ENST00000526549.5
ENST00000530137.1
ENST00000533380.5
CDS-3UTR GCA 90 bp TATCCCTCCCCAGTCCGACACAGCCAGAGGGGTCCTGAGTGGCCCAAGCACCCCGCTTCTTTCCCACGATaGACCAGCCACGGATGCAGA +
Preference number: 4 (lower is better)
Translates to: YPSPVRHSQRGPEWPKHPASFPR*TSHGCR
Trigger: TCTGCATCCGTGGCTGGTGCATCGTGGGAAAGAAGC...GGGGTGCTTGGGCCACTCAGGACCCCTCTGGCTGTGTCGGACTGGGGAGGGATA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
ENST00000533380.5
CDS-3UTR GCA 90 bp GGGGTCCTGAGTGGCCCAAGCACCCCTTTGAGTCTTTCCCACCCAGGAGGTCTTGCTCTGCCCCCACCCTaGTTAGGCAGGGAGGGTGAA +
Preference number: 4 (lower is better)
Translates to: GVLSGPSTPLSLSHPGGLALPPP*LGREGE
Trigger: TTCACCCTCCCTGCCTAAGCAGGGTGGGGGCAGAGC...AAGACCTCCTGGGTGGGAAAGACTCAAAGGGGTGCTTGGGCCACTCAGGACCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
CDS-3UTR GCA 90 bp GGCAGGGAGGAGAGTGCCCTGAGGTCCATGGCGTGTGGGGTGGGTTTTCCACTGGCCGTCAGTCATGGCTaGCAACAATTGCCCCATGGC +
Preference number: 4 (lower is better)
Translates to: GREESALRSMACGVGFPLAVSHG*QQLPHG
Trigger: GCCATGGGGCAATTGTTGGCAGCCATGACTGACGGC...CAGTGGAAAACCCACCCCACACGCCATGGACCTCAGGGCACTCTCCTCCCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
CDS-3UTR GCA 90 bp GGGCAGGGAGGAGAGTGCCCTGAGGTCCATGGCGTGTGGGGTGGGTTTTCCACTCTTGGCATGCATGCGTaGGTGCTCGACCCTCATCCA +
Preference number: 4 (lower is better)
Translates to: GQGGECPEVHGVWGGFSTLGMHA*VLDPHP
Trigger: TGGATGAGGGTCGAGCACGCACGCATGCATGCCAAG...AGTGGAAAACCCACCCCACACGCCATGGACCTCAGGGCACTCTCCTCCCTGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
ENST00000533380.5
CDS-3UTR CCA 90 bp ACAGCCAGAGGGGTCCTGAGTGGCCCAAGCACCCCTTTGAGTCTTTCCCACCCATGCACCAGGAGCAGCTaGGCCACCACCAAGGTTGCG +
Preference number: 4 (lower is better)
Translates to: TARGVLSGPSTPLSLSHPCTRSS*ATTKVA
Trigger: CGCAACCTTGGTGGTGGCCCAGCTGCTCCTGGTGCA...TGGGTGGGAAAGACTCAAAGGGGTGCTTGGGCCACTCAGGACCCCTCTGGCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
ENST00000533380.5
CDS-3UTR CCA 90 bp TATCCCTCCCCAGTCCGACACAGCCAGAGGGGTCCTGAGTGGCCCAAGCACCCCGAGGTCCATGGCGTGTaGGGTGGGTTTTCCACTGAT +
Preference number: 4 (lower is better)
Translates to: YPSPVRHSQRGPEWPKHPEVHGV*GGFSTD
Trigger: ATCAGTGGAAAACCCACCCCACACGCCATGGACCTC...GGGGTGCTTGGGCCACTCAGGACCCCTCTGGCTGTGTCGGACTGGGGAGGGATA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
ENST00000533380.5
CDS-3UTR CCA 90 bp CAGGGAGGAGAGTGCCCTGAGGTCCATGGCGTGTGGGGTGGGTTTTCCACTGATCCCAGGAGGTCTTTGTaGGCAGGGAGGAGAGTGCCC +
Preference number: 4 (lower is better)
Translates to: QGGECPEVHGVWGGFSTDPRRSL*AGRRVP
Trigger: GGGCACTCTCCTCCCTGCCCACAAAGACCTCCTGGG...ATCAGTGGAAAACCCACCCCACACGCCATGGACCTCAGGGCACTCTCCTCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000525243.5
ENST00000526549.5
ENST00000530137.1
ENST00000533380.5
CDS-3UTR TCA 90 bp AGGCCCATGTTTGACCTCCCACTTTATTCAAGTCGCCTAGGACTAGGGCTGGGGGGGAGGAGAGTGCCCTaGGGTCCATGGCGTGTGGGG +
Preference number: 4 (lower is better)
Translates to: RPMFDLPLYSSRLGLGLGGRRVP*GPWRVG
Trigger: CCCCACACGCCATGGACCTCAGGGCACTCTCCTCCC...CCCCAGCCCTAGTCCTAGGCGACTTGAATAAAGTGGGAGGTCAAACATGGGCCT
61% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
CDS-3UTR TCA 90 bp CTGCCAGGCTACCAAGTATCGAAGCCAGTCCAGCAGTTGCCCATACATGACGTGGGGAGGAGAGTGCCCTaGGGTCCATGGCGTGTGGGG +
Preference number: 4 (lower is better)
Translates to: LPGYQVSKPVQQLPIHDVGRRVP*GPWRVG
Trigger: CCCCACACGCCATGGACCTCAGGGCACTCTCCTCCC...CACGTCATGTATGGGCAACTGCTGGACTGGCTTCGATACTTGGTAGCCTGGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393713.7
ENST00000525243.5
ENST00000526549.5
CDS-3UTR TCA 90 bp GGCGTGTGGGGTGGGTTTTCCACTGATGCTCTTCATCACTATTCCAGGCCCAGGCAGCCAGAGGGGTCCTaGGTGGCCCAAGCACCCCTT +
Preference number: 4 (lower is better)
Translates to: GVWGGFSTDALHHYSRPRQPEGS*VAQAPL
Trigger: AAGGGGTGCTTGGGCCACTCAGGACCCCTCTGGCTG...CCTGGGCCTGGAATAGTGATGAAGAGCATCAGTGGAAAACCCACCCCACACGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000393713.7
ENST00000526549.5
CDS-3UTR TCA 90 bp GGCAGGGAGGAGAGTGCCCTGAGGTCCATGGCGTGTGGGGTGGGTTTTCCACTGGGATCCACTGAAGAATaGGCTTGCACAAGGGGCCGT +
Preference number: 4 (lower is better)
Translates to: GREESALRSMACGVGFPLGSTEE*ACTRGR
Trigger: ACGGCCCCTTGTGCAAGCTCATTCTTCAGTGGATCC...CAGTGGAAAACCCACCCCACACGCCATGGACCTCAGGGCACTCTCCTCCCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
CDS-3UTR GCA 90 bp GGAGAGTGCCCTGAGGTCCATGGCGTGTGGGGTGGGTTTTCCACTGATGCTCTTCTCCACCTCCACCACTaGCGCCATCTTCACGGCTCG +
Preference number: 4 (lower is better)
Translates to: GECPEVHGVWGGFSTDALLHLHH*RHLHGS
Trigger: CGAGCCGTGAAGATGGCGGCAGTGGTGGAGGTGGAG...AAGAGCATCAGTGGAAAACCCACCCCACACGCCATGGACCTCAGGGCACTCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000533380.5
CDS-3UTR GCA 90 bp CCATCATATCCCTCCCCAGTCCGACACAGCCAGAGGGGTCCTGAGTGGCCCAAGGCATGCATGCGTGCGTaGTCGACCCTCCATTGCTCT +
Preference number: 4 (lower is better)
Translates to: PSYPSPVRHSQRGPEWPKACMRA*STLHCS
Trigger: AGAGCAATGGAGGGTCGAGCACGCACGCATGCATGC...CTTGGGCCACTCAGGACCCCTCTGGCTGTGTCGGACTGGGGAGGGATATGATGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361756.8
CDS-3UTR GCA 90 bp GAAGGGGCAGGCCCTACTGAGCCATATTCCCTAGAAACCCAATGCCGAAGGCCCCCACGGTGCTTGGCATaGATGCGTGCGTGCTCGACC +
Preference number: 4 (lower is better)
Translates to: EGAGPTEPYSLETQCRRPPRCLA*MRACST
Trigger: GGTCGAGCACGCACGCATGCATGCCAAGCACCGTGG...GGGCCTTCGGCATTGGGTTTCTAGGGAATATGGCTCAGTAGGGCCTGCCCCTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
CDS-3UTR GCA 90 bp GGGGTCCTGAGTGGCCCAAGCACCCCTTTGAGTCTTTCCCACCCAGGAGGTCTTGCTTCATGGCCACGGTaGTTGGCATGCATGCGTGCG +
Preference number: 4 (lower is better)
Translates to: GVLSGPSTPLSLSHPGGLASWPR*LACMRA
Trigger: CGCACGCATGCATGCCAAGCACCGTGGCCATGAAGC...AAGACCTCCTGGGTGGGAAAGACTCAAAGGGGTGCTTGGGCCACTCAGGACCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
ENST00000533380.5
CDS-3UTR GCA 90 bp CAGGGAGGAGAGTGCCCTGAGGTCCATGGCGTGTGGGGTGGGTTTTCCACTGATGCTTCATGGCCACGGTaGTTGGCATGCATGCGTGCG +
Preference number: 4 (lower is better)
Translates to: QGGECPEVHGVWGGFSTDASWPR*LACMRA
Trigger: CGCACGCATGCATGCCAAGCACCGTGGCCATGAAGC...ATCAGTGGAAAACCCACCCCACACGCCATGGACCTCAGGGCACTCTCCTCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000525243.5
ENST00000526549.5
ENST00000530137.1
ENST00000533380.5
CDS-3UTR GCA 90 bp AGTGCCCTGAGGTCCATGGCGTGTGGGGTGGGTTTTCCACTGATGCTCTTCATCCACCTGGGGCCTCAGTaGTCACCCGTGGCACAAGCC +
Preference number: 4 (lower is better)
Translates to: SALRSMACGVGFPLMLFIHLGPQ*SPVAQA
Trigger: GGCTTGTGCCACGGGTGAGCACTGAGGCCCCAGGTG...GATGAAGAGCATCAGTGGAAAACCCACCCCACACGCCATGGACCTCAGGGCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
CDS-3UTR GCA 90 bp TATCCCTCCCCAGTCCGACACAGCCAGAGGGGTCCTGAGTGGCCCAAGCACCCCGGACTGGGAATCCCCTaGCAGCTTCAAGGACATATC +
Preference number: 4 (lower is better)
Translates to: YPSPVRHSQRGPEWPKHPGLGIP*QLQGHI
Trigger: GATATGTCCTTGAAGCTGGCAGGGGATTCCCAGTCC...GGGGTGCTTGGGCCACTCAGGACCCCTCTGGCTGTGTCGGACTGGGGAGGGATA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
CDS-3UTR GCA 90 bp CGACACAGCCAGAGGGGTCCTGAGTGGCCCAAGCACCCCTTTGAGTCTTTCCCAGCATGCATGCGTGCGTaGTCGACCCTCATCCAGCTC +
Preference number: 4 (lower is better)
Translates to: RHSQRGPEWPKHPFESFPACMRA*STLIQL
Trigger: GAGCTGGATGAGGGTCGAGCACGCACGCATGCATGC...TGGGAAAGACTCAAAGGGGTGCTTGGGCCACTCAGGACCCCTCTGGCTGTGTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
ENST00000533380.5
CDS-3UTR CCA 90 bp ACAGCCAGAGGGGTCCTGAGTGGCCCAAGCACCCCTTTGAGTCTTTCCCACCCACATGGCCACGGTGCTTaGCATGCATGCGTGCGTGCT +
Preference number: 4 (lower is better)
Translates to: TARGVLSGPSTPLSLSHPHGHGA*HACVRA
Trigger: AGCACGCACGCATGCATGCCAAGCACCGTGGCCATG...TGGGTGGGAAAGACTCAAAGGGGTGCTTGGGCCACTCAGGACCCCTCTGGCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
ENST00000533380.5
CDS-3UTR CCA 90 bp ACGGGAGTGACAACATCCTGCTTCGTTCTTGCTGCCCTTGAAGGGGCAGGCCCTTGCACCAGGAGCAGCTaGGCCACCACCAAGGTTGCG +
Preference number: 4 (lower is better)
Translates to: TGVTTSCFVLAALEGAGPCTRSS*ATTKVA
Trigger: CGCAACCTTGGTGGTGGCCCAGCTGCTCCTGGTGCA...AGGGCCTGCCCCTTCAAGGGCAGCAAGAACGAAGCAGGATGTTGTCACTCCCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
CDS-3UTR CCA 90 bp CGACACAGCCAGAGGGGTCCTGAGTGGCCCAAGCACCCCTTTGAGTCTTTCCCACAGAGGGGTCCTGAGTaGCCCAAGCACCCCTTTGAG +
Preference number: 4 (lower is better)
Translates to: RHSQRGPEWPKHPFESFPQRGPE*PKHPFE
Trigger: CTCAAAGGGGTGCTTGGGCCACTCAGGACCCCTCTG...TGGGAAAGACTCAAAGGGGTGCTTGGGCCACTCAGGACCCCTCTGGCTGTGTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
ENST00000533380.5
CDS-3UTR CCA 90 bp GGGGTCCTGAGTGGCCCAAGCACCCCTTTGAGTCTTTCCCACCCAGGAGGTCTTCAGAGGGGTCCTGAGTaGCCCAAGCACCCCTTTGAG +
Preference number: 4 (lower is better)
Translates to: GVLSGPSTPLSLSHPGGLQRGPE*PKHPFE
Trigger: CTCAAAGGGGTGCTTGGGCCACTCAGGACCCCTCTG...AAGACCTCCTGGGTGGGAAAGACTCAAAGGGGTGCTTGGGCCACTCAGGACCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
ENST00000533380.5
CDS-3UTR CCA 90 bp ATGATGACAGGCTGCCAGGCTACCAAGTATCGAAGCCAGTCCAGCAGTTGCCCAGGGAGGGAGGACACCTaGGGCCTCAGTGCTCACCCG +
Preference number: 4 (lower is better)
Translates to: MMTGCQATKYRSQSSSCPGREDT*GLSAHP
Trigger: CGGGTGAGCACTGAGGCCCCAGGTGTCCTCCCTCCC...TGGGCAACTGCTGGACTGGCTTCGATACTTGGTAGCCTGGCAGCCTGTCATCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393713.7
ENST00000526549.5
CDS-3UTR CCA 90 bp GGAGGAGAGTGCCCTGAGGTCCATGGCGTGTGGGGTGGGTTTTCCACTGATGCTTGGCAGAGTGACCGCTaGCACGTGTCACCACTCCAC +
Preference number: 4 (lower is better)
Translates to: GGECPEVHGVWGGFSTDAWQSDR*HVSPLH
Trigger: GTGGAGTGGTGACACGTGCCAGCGGTCACTCTGCCA...AGCATCAGTGGAAAACCCACCCCACACGCCATGGACCTCAGGGCACTCTCCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
CDS-3UTR CCA 90 bp TATCCCTCCCCAGTCCGACACAGCCAGAGGGGTCCTGAGTGGCCCAAGCACCCCTGTAGGGATATTCCCTaGACTGGGAATCCCCTGCCA +
Preference number: 4 (lower is better)
Translates to: YPSPVRHSQRGPEWPKHPCRDIP*TGNPLP
Trigger: TGGCAGGGGATTCCCAGTCCAGGGAATATCCCTACA...GGGGTGCTTGGGCCACTCAGGACCCCTCTGGCTGTGTCGGACTGGGGAGGGATA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
CDS-3UTR TCA 90 bp GGGGTCCTGAGTGGCCCAAGCACCCCTTTGAGTCTTTCCCACCCAGGAGGTCTTTGCCCATACATGACGTaGGGCCTCTCCCAGGGATTG +
Preference number: 4 (lower is better)
Translates to: GVLSGPSTPLSLSHPGGLCPYMT*GLSQGL
Trigger: CAATCCCTGGGAGAGGCCTCACGTCATGTATGGGCA...AAGACCTCCTGGGTGGGAAAGACTCAAAGGGGTGCTTGGGCCACTCAGGACCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
ENST00000533380.5
CDS-3UTR TCA 90 bp GGAGGAGAGTGCCCTGAGGTCCATGGCGTGTGGGGTGGGTTTTCCACTGATGCTTGCCCATACATGACGTaGGGCCTCTCCCAGGGATTG +
Preference number: 4 (lower is better)
Translates to: GGECPEVHGVWGGFSTDACPYMT*GLSQGL
Trigger: CAATCCCTGGGAGAGGCCTCACGTCATGTATGGGCA...AGCATCAGTGGAAAACCCACCCCACACGCCATGGACCTCAGGGCACTCTCCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000525243.5
ENST00000526549.5
ENST00000530137.1
ENST00000533380.5
CDS-3UTR TCA 90 bp GGAGAGTGCCCTGAGGTCCATGGCGTGTGGGGTGGGTTTTCCACTGATGCTCTTGCAGTTGCCCATACATaGCGTGAGGCCTCTCCCAGG +
Preference number: 4 (lower is better)
Translates to: GECPEVHGVWGGFSTDALAVAHT*REASPR
Trigger: CCTGGGAGAGGCCTCACGTCATGTATGGGCAACTGC...AAGAGCATCAGTGGAAAACCCACCCCACACGCCATGGACCTCAGGGCACTCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000525243.5
ENST00000526549.5
ENST00000530137.1
ENST00000533380.5
CDS-3UTR TCA 90 bp AAGAATGAGCTTGCACAAGGGGCCGTCAGTCATGGCTGCCAACAATTGCCCCATGGGAGGAGAGTGCCCTaGGGTCCATGGCGTGTGGGG +
Preference number: 4 (lower is better)
Translates to: KNELAQGAVSHGCQQLPHGRRVP*GPWRVG
Trigger: CCCCACACGCCATGGACCTCAGGGCACTCTCCTCCC...ATGGGGCAATTGTTGGCAGCCATGACTGACGGCCCCTTGTGCAAGCTCATTCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
CDS-3UTR TCA 90 bp ATGACAGGCTGCCAGGCTACCAAGTATCGAAGCCAGTCCAGCAGTTGCCCATACCAGCCAGAGGGGTCCTaGGTGGCCCAAGCACCCCTT +
Preference number: 4 (lower is better)
Translates to: MTGCQATKYRSQSSSCPYQPEGS*VAQAPL
Trigger: AAGGGGTGCTTGGGCCACTCAGGACCCCTCTGGCTG...GTATGGGCAACTGCTGGACTGGCTTCGATACTTGGTAGCCTGGCAGCCTGTCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393713.7
ENST00000526549.5
CDS-3UTR GCA 90 bp GGCGTGTGGGGTGGGTTTTCCACTGATGCTCTTCATCACTATTCCAGGCCCAGGGGTGCTTGGCATGCATaGGTGCGTGCTCGACCCTCC +
Preference number: 4 (lower is better)
Translates to: GVWGGFSTDALHHYSRPRGAWHA*VRARPS
Trigger: GGAGGGTCGAGCACGCACGCATGCATGCCAAGCACC...CCTGGGCCTGGAATAGTGATGAAGAGCATCAGTGGAAAACCCACCCCACACGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000525243.5
CDS-3UTR GCA 90 bp AGTGGCCCAAGCACCCCTTTGAGTCTTTCCCACCCAGGAGGTCTTTGTGGGCAGGCTTCATGGCCACGGTaGTTGGCATGCATGCGTGCG +
Preference number: 4 (lower is better)
Translates to: SGPSTPLSLSHPGGLCGQASWPR*LACMRA
Trigger: CGCACGCATGCATGCCAAGCACCGTGGCCATGAAGC...CTGCCCACAAAGACCTCCTGGGTGGGAAAGACTCAAAGGGGTGCTTGGGCCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
ENST00000533380.5
CDS-3UTR GCA 90 bp GGCAGGGAGGAGAGTGCCCTGAGGTCCATGGCGTGTGGGGTGGGTTTTCCACTGACGTCCACAAAGATCTaGTGCCCACACACAGCACAC +
Preference number: 4 (lower is better)
Translates to: GREESALRSMACGVGFPLTSTKI*CPHTAH
Trigger: GTGTGCTGTGTGTGGGCAGCAGATCTTTGTGGACGT...CAGTGGAAAACCCACCCCACACGCCATGGACCTCAGGGCACTCTCCTCCCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361756.8
ENST00000525243.5
ENST00000526549.5
ENST00000530137.1
ENST00000533380.5
CDS-3UTR GCA 90 bp GGGCAGGGAGGAGAGTGCCCTGAGGTCCATGGCGTGTGGGGTGGGTTTTCCACTTGCACCAGCCACGGATaGAGAACTCGTGGAAGACAT +
Preference number: 4 (lower is better)
Translates to: GQGGECPEVHGVWGGFSTCTSHG*RTRGRH
Trigger: ATGTCTTCCACGAGTTCTGCATCCGTGGCTGGTGCA...AGTGGAAAACCCACCCCACACGCCATGGACCTCAGGGCACTCTCCTCCCTGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361756.8
ENST00000525243.5
ENST00000526549.5
ENST00000530137.1
ENST00000533380.5
CDS-3UTR GCA 90 bp AGGCCCATGTTTGACCTCCCACTTTATTCAAGTCGCCTAGGACTAGGGCTGGGGGGGCAGGGAGGAGAGTaGCCTGAGGTCCATGGCGTG +
Preference number: 4 (lower is better)
Translates to: RPMFDLPLYSSRLGLGLGGQGGE*PEVHGV
Trigger: CACGCCATGGACCTCAGGGCACTCTCCTCCCTGCCC...CCCCAGCCCTAGTCCTAGGCGACTTGAATAAAGTGGGAGGTCAAACATGGGCCT
60% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
CDS-3UTR GCA 90 bp GTGACAACATCCTGCTTCGTTCTTGCTGCCCTTGAAGGGGCAGGCCCTACTGAGGCTCTGCCCCCACCCTaGTTAGGCAGGGAGGGTGAA +
Preference number: 4 (lower is better)
Translates to: VTTSCFVLAALEGAGPTEALPPP*LGREGE
Trigger: TTCACCCTCCCTGCCTAAGCAGGGTGGGGGCAGAGC...CTCAGTAGGGCCTGCCCCTTCAAGGGCAGCAAGAACGAAGCAGGATGTTGTCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
CDS-3UTR GCA 90 bp GAGAGTGCCCTGAGGTCCATGGCGTGTGGGGTGGGTTTTCCACTGATGCTCTTCGCATGCATGCGTGCGTaGTCGACCCTCATCCAGCTC +
Preference number: 4 (lower is better)
Translates to: ESALRSMACGVGFPLMLFACMRA*STLIQL
Trigger: GAGCTGGATGAGGGTCGAGCACGCACGCATGCATGC...GAAGAGCATCAGTGGAAAACCCACCCCACACGCCATGGACCTCAGGGCACTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
ENST00000533380.5
CDS-3UTR CCA 90 bp CTTTGTGGGCAGGGAGGAGAGTGCCCTGAGGTCCATGGCGTGTGGGGTGGGTTTGCATGCATAGCTTCATaGCCACGGTGCTTGGCATGC +
Preference number: 4 (lower is better)
Translates to: LCGQGGECPEVHGVWGGFACIAS*PRCLAC
Trigger: GCATGCCAAGCACCGTGGCCATGAAGCTATGCATGC...AAACCCACCCCACACGCCATGGACCTCAGGGCACTCTCCTCCCTGCCCACAAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000525243.5
ENST00000526549.5
ENST00000530137.1
ENST00000533380.5
CDS-3UTR CCA 90 bp CCATCATATCCCTCCCCAGTCCGACACAGCCAGAGGGGTCCTGAGTGGCCCAAGGCATGCATAGCTTCATaGCCACGGTGCTTGGCATGC +
Preference number: 4 (lower is better)
Translates to: PSYPSPVRHSQRGPEWPKACIAS*PRCLAC
Trigger: GCATGCCAAGCACCGTGGCCATGAAGCTATGCATGC...CTTGGGCCACTCAGGACCCCTCTGGCTGTGTCGGACTGGGGAGGGATATGATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
ENST00000533380.5
CDS-3UTR CCA 90 bp AGTGCCCTGAGGTCCATGGCGTGTGGGGTGGGTTTTCCACTGATGCTCTTCATCTGCACCAGGAGCAGCTaGGCCACCACCAAGGTTGCG +
Preference number: 4 (lower is better)
Translates to: SALRSMACGVGFPLMLFICTRSS*ATTKVA
Trigger: CGCAACCTTGGTGGTGGCCCAGCTGCTCCTGGTGCA...GATGAAGAGCATCAGTGGAAAACCCACCCCACACGCCATGGACCTCAGGGCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000525243.5
ENST00000526549.5
ENST00000530137.1
ENST00000533380.5
CDS-3UTR CCA 90 bp AGGGAGGACACCTGGGGCCTCAGTGCTCACCCGTGGCACAAGCCTGAGTACGTTGGATATTCCCTGGACTaGGAATCCCCTGCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: REDTWGLSAHPWHKPEYVGYSLD*ESPASF
Trigger: GAAGCTGGCAGGGGATTCCCAGTCCAGGGAATATCC...AACGTACTCAGGCTTGTGCCACGGGTGAGCACTGAGGCCCCAGGTGTCCTCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
CDS-3UTR TCA 90 bp TATCCCTCCCCAGTCCGACACAGCCAGAGGGGTCCTGAGTGGCCCAAGCACCCCAACTCGTGGAAGACATaGTTGCAGGACAGCCTATAC +
Preference number: 4 (lower is better)
Translates to: YPSPVRHSQRGPEWPKHPNSWKT*LQDSLY
Trigger: GTATAGGCTGTCCTGCAATCATGTCTTCCACGAGTT...GGGGTGCTTGGGCCACTCAGGACCCCTCTGGCTGTGTCGGACTGGGGAGGGATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000526549.5
ENST00000530137.1
ENST00000533380.5
CDS-3UTR TCA 90 bp TCATATCCCTCCCCAGTCCGACACAGCCAGAGGGGTCCTGAGTGGCCCAAGCACGGCCCAGGATGTAGTTaGTGCCTTGGACTACACCAA +
Preference number: 4 (lower is better)
Translates to: SYPSPVRHSQRGPEWPKHGPGCS*CLGLHQ
Trigger: TTGGTGTAGTCCAAGGCATCAACTACATCCTGGGCC...GTGCTTGGGCCACTCAGGACCCCTCTGGCTGTGTCGGACTGGGGAGGGATATGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
ENST00000533380.5
CDS-3UTR TCA 90 bp AGTGCCCTGAGGTCCATGGCGTGTGGGGTGGGTTTTCCACTGATGCTCTTCATCGCCCAAGCACCCCTTTaGGTCTTTCCCACCCAGGAG +
Preference number: 4 (lower is better)
Translates to: SALRSMACGVGFPLMLFIAQAPL*VFPTQE
Trigger: CTCCTGGGTGGGAAAGACTCAAAGGGGTGCTTGGGC...GATGAAGAGCATCAGTGGAAAACCCACCCCACACGCCATGGACCTCAGGGCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
ENST00000533380.5
CDS-3UTR TCA 90 bp AGTGCCCTGAGGTCCATGGCGTGTGGGGTGGGTTTTCCACTGATGCTCTTCATCACCTCTATTCTTGGCTaGCCACAGCCCTGCCCACGG +
Preference number: 4 (lower is better)
Translates to: SALRSMACGVGFPLMLFITSILG*PQPCPR
Trigger: CCGTGGGCAGGGCTGTGGTCAGCCAAGAATAGAGGT...GATGAAGAGCATCAGTGGAAAACCCACCCCACACGCCATGGACCTCAGGGCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
CDS-3UTR TCA 90 bp GTCCGACACAGCCAGAGGGGTCCTGAGTGGCCCAAGCACCCCTTTGAGTCTTTCGGATCCACTGAAGAATaGGCTTGCACAAGGGGCCGT +
Preference number: 4 (lower is better)
Translates to: VRHSQRGPEWPKHPFESFGSTEE*ACTRGR
Trigger: ACGGCCCCTTGTGCAAGCTCATTCTTCAGTGGATCC...GAAAGACTCAAAGGGGTGCTTGGGCCACTCAGGACCCCTCTGGCTGTGTCGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
CDS-3UTR GCA 90 bp GACAGGCTGCCAGGCTACCAAGTATCGAAGCCAGTCCAGCAGTTGCCCATACATCTCCACCTCCACCACTaGCGCCATCTTCACGGCTCG +
Preference number: 4 (lower is better)
Translates to: DRLPGYQVSKPVQQLPIHLHLHH*RHLHGS
Trigger: CGAGCCGTGAAGATGGCGGCAGTGGTGGAGGTGGAG...ATGTATGGGCAACTGCTGGACTGGCTTCGATACTTGGTAGCCTGGCAGCCTGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393713.7
ENST00000530655.5
CDS-3UTR GCA 90 bp GGCAGGGAGGAGAGTGCCCTGAGGTCCATGGCGTGTGGGGTGGGTTTTCCACTGTGCTCGACCCTCCATTaGTCTTCTGGAGAGAGATCT +
Preference number: 4 (lower is better)
Translates to: GREESALRSMACGVGFPLCSTLH*SSGERS
Trigger: AGATCTCTCTCCAGAAGAGCAATGGAGGGTCGAGCA...CAGTGGAAAACCCACCCCACACGCCATGGACCTCAGGGCACTCTCCTCCCTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361756.8
ENST00000525243.5
CDS-3UTR GCA 90 bp CCAATGATGACAGGCTGCCAGGCTACCAAGTATCGAAGCCAGTCCAGCAGTTGCCCACGGTGCTTGGCATaGATGCGTGCGTGCTCGACC +
Preference number: 4 (lower is better)
Translates to: PMMTGCQATKYRSQSSSCPRCLA*MRACST
Trigger: GGTCGAGCACGCACGCATGCATGCCAAGCACCGTGG...GCAACTGCTGGACTGGCTTCGATACTTGGTAGCCTGGCAGCCTGTCATCATTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393713.7
ENST00000525243.5
ENST00000526549.5
ENST00000530655.5
CDS-3UTR GCA 90 bp CAGGGAGGAGAGTGCCCTGAGGTCCATGGCGTGTGGGGTGGGTTTTCCACTGATGGCCACCACCAAGGTTaGGATGAGGATGAGGACCAT +
Preference number: 4 (lower is better)
Translates to: QGGECPEVHGVWGGFSTDGHHQG*DEDEDH
Trigger: ATGGTCCTCATCCTCATCGCAACCTTGGTGGTGGCC...ATCAGTGGAAAACCCACCCCACACGCCATGGACCTCAGGGCACTCTCCTCCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000525243.5
ENST00000526549.5
ENST00000530137.1
ENST00000533380.5
CDS-3UTR GCA 90 bp GCGTGTGGGGTGGGTTTTCCACTGATGCTCTTCATCACTATTCCAGGCCCAGGAGAGCGTGGGTGCCTCTaGTTCCACTGCACCAGGAGC +
Preference number: 4 (lower is better)
Translates to: ACGVGFPLMLFITIPGPGERGCL*FHCTRS
Trigger: GCTCCTGGTGCAGTGGAAGCAGAGGCACCCACGCTC...TCCTGGGCCTGGAATAGTGATGAAGAGCATCAGTGGAAAACCCACCCCACACGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393713.7
ENST00000525243.5
ENST00000526549.5
CDS-3UTR GCA 90 bp ATGACAGGCTGCCAGGCTACCAAGTATCGAAGCCAGTCCAGCAGTTGCCCATACGAGCGTGGGTGCCTCTaGTTCCACTGCACCAGGAGC +
Preference number: 4 (lower is better)
Translates to: MTGCQATKYRSQSSSCPYERGCL*FHCTRS
Trigger: GCTCCTGGTGCAGTGGAAGCAGAGGCACCCACGCTC...GTATGGGCAACTGCTGGACTGGCTTCGATACTTGGTAGCCTGGCAGCCTGTCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393713.7
ENST00000525243.5
ENST00000526549.5
ENST00000530655.5
CDS-3UTR GCA 90 bp CTGAAGGATCCACTGAAGAATGAGCTTGCACAAGGGGCCGTCAGTCATGGCTGCGAGCGTGGGTGCCTCTaGTTCCACTGCACCAGGAGC +
Preference number: 4 (lower is better)
Translates to: LKDPLKNELAQGAVSHGCERGCL*FHCTRS
Trigger: GCTCCTGGTGCAGTGGAAGCAGAGGCACCCACGCTC...GCAGCCATGACTGACGGCCCCTTGTGCAAGCTCATTCTTCAGTGGATCCTTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
CDS-3UTR GCA 90 bp CAAGTATCGAAGCCAGTCCAGCAGTTGCCCATACATGACGTGAGGCCTCTCCCAGAGCGTGGGTGCCTCTaGTTCCACTGCACCAGGAGC +
Preference number: 4 (lower is better)
Translates to: QVSKPVQQLPIHDVRPLPERGCL*FHCTRS
Trigger: GCTCCTGGTGCAGTGGAAGCAGAGGCACCCACGCTC...TGGGAGAGGCCTCACGTCATGTATGGGCAACTGCTGGACTGGCTTCGATACTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393713.7
ENST00000525243.5
ENST00000526549.5
ENST00000530655.5
CDS-3UTR GCA 90 bp TATCCCTCCCCAGTCCGACACAGCCAGAGGGGTCCTGAGTGGCCCAAGCACCCCCGTGGAAGACATGATTaGAGGACAGCCTATACGTGT +
Preference number: 4 (lower is better)
Translates to: YPSPVRHSQRGPEWPKHPRGRHD*RTAYTC
Trigger: ACACGTATAGGCTGTCCTGCAATCATGTCTTCCACG...GGGGTGCTTGGGCCACTCAGGACCCCTCTGGCTGTGTCGGACTGGGGAGGGATA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000526549.5
ENST00000530137.1
ENST00000533380.5
CDS-3UTR GCA 90 bp CTTTGTGGGCAGGGAGGAGAGTGCCCTGAGGTCCATGGCGTGTGGGGTGGGTTTTGCACCAGCCACGGATaGAGAACTCGTGGAAGACAT +
Preference number: 4 (lower is better)
Translates to: LCGQGGECPEVHGVWGGFCTSHG*RTRGRH
Trigger: ATGTCTTCCACGAGTTCTGCATCCGTGGCTGGTGCA...AAACCCACCCCACACGCCATGGACCTCAGGGCACTCTCCTCCCTGCCCACAAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361756.8
ENST00000525243.5
ENST00000526549.5
ENST00000530137.1
ENST00000533380.5
CDS-3UTR GCA 90 bp GGGGTCCTGAGTGGCCCAAGCACCCCTTTGAGTCTTTCCCACCCAGGAGGTCTTGCTTCTTTCCCACGATaGACCAGCCACGGATGCAGA +
Preference number: 4 (lower is better)
Translates to: GVLSGPSTPLSLSHPGGLASFPR*TSHGCR
Trigger: TCTGCATCCGTGGCTGGTGCATCGTGGGAAAGAAGC...AAGACCTCCTGGGTGGGAAAGACTCAAAGGGGTGCTTGGGCCACTCAGGACCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
ENST00000533380.5
CDS-3UTR GCA 90 bp CCTTGGACTACACCAATGATGACAGGCTGCCAGGCTACCAAGTATCGAAGCCAGGGGCAGGGAGGAGAGTaGCCTGAGGTCCATGGCGTG +
Preference number: 4 (lower is better)
Translates to: PWTTPMMTGCQATKYRSQGQGGE*PEVHGV
Trigger: CACGCCATGGACCTCAGGGCACTCTCCTCCCTGCCC...CTGGCTTCGATACTTGGTAGCCTGGCAGCCTGTCATCATTGGTGTAGTCCAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393713.7
ENST00000525243.5
ENST00000526549.5
CDS-3UTR GCA 90 bp GGCAGGGAGGAGAGTGCCCTGAGGTCCATGGCGTGTGGGGTGGGTTTTCCACTGCTCTTCTATACTAAGTaGACCAGGCTTGAGCCCCAC +
Preference number: 4 (lower is better)
Translates to: GREESALRSMACGVGFPLLFYTK*TRLEPH
Trigger: GTGGGGCTCAAGCCTGGTGCACTTAGTATAGAAGAG...CAGTGGAAAACCCACCCCACACGCCATGGACCTCAGGGCACTCTCCTCCCTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
CDS-3UTR CCA 90 bp CCAATGATGACAGGCTGCCAGGCTACCAAGTATCGAAGCCAGTCCAGCAGTTGCTGCACCAGGAGCAGCTaGGCCACCACCAAGGTTGCG +
Preference number: 4 (lower is better)
Translates to: PMMTGCQATKYRSQSSSCCTRSS*ATTKVA
Trigger: CGCAACCTTGGTGGTGGCCCAGCTGCTCCTGGTGCA...GCAACTGCTGGACTGGCTTCGATACTTGGTAGCCTGGCAGCCTGTCATCATTGG
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393713.7
ENST00000525243.5
ENST00000526549.5
ENST00000530655.5
CDS-3UTR CCA 90 bp AAGGCTCCTTTAAACCAAAAATGTCATGGCTCTGCCCCCACCCTGCTTAGGCAGGGGAGGGAGGACACCTaGGGCCTCAGTGCTCACCCG +
Preference number: 4 (lower is better)
Translates to: KAPLNQKCHGSAPTLLRQGREDT*GLSAHP
Trigger: CGGGTGAGCACTGAGGCCCCAGGTGTCCTCCCTCCC...CTGCCTAAGCAGGGTGGGGGCAGAGCCATGACATTTTTGGTTTAAAGGAGCCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
CDS-3UTR CCA 90 bp ACGGGAGTGACAACATCCTGCTTCGTTCTTGCTGCCCTTGAAGGGGCAGGCCCTAGGGGCCGTCAGTCATaGCTGCCAACAATTGCCCCA +
Preference number: 4 (lower is better)
Translates to: TGVTTSCFVLAALEGAGPRGRQS*LPTIAP
Trigger: TGGGGCAATTGTTGGCAGCCATGACTGACGGCCCCT...AGGGCCTGCCCCTTCAAGGGCAGCAAGAACGAAGCAGGATGTTGTCACTCCCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
CDS-3UTR CCA 90 bp AGTGGCCCAAGCACCCCTTTGAGTCTTTCCCACCCAGGAGGTCTTTGTGGGCAGAGGGGCCGTCAGTCATaGCTGCCAACAATTGCCCCA +
Preference number: 4 (lower is better)
Translates to: SGPSTPLSLSHPGGLCGQRGRQS*LPTIAP
Trigger: TGGGGCAATTGTTGGCAGCCATGACTGACGGCCCCT...CTGCCCACAAAGACCTCCTGGGTGGGAAAGACTCAAAGGGGTGCTTGGGCCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
CDS-3UTR CCA 90 bp GAGAGTGCCCTGAGGTCCATGGCGTGTGGGGTGGGTTTTCCACTGATGCTCTTCAGGGGCCGTCAGTCATaGCTGCCAACAATTGCCCCA +
Preference number: 4 (lower is better)
Translates to: ESALRSMACGVGFPLMLFRGRQS*LPTIAP
Trigger: TGGGGCAATTGTTGGCAGCCATGACTGACGGCCCCT...GAAGAGCATCAGTGGAAAACCCACCCCACACGCCATGGACCTCAGGGCACTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
CDS-3UTR CCA 90 bp CTTTGTGGGCAGGGAGGAGAGTGCCCTGAGGTCCATGGCGTGTGGGGTGGGTTTAAGAAGGAAGTGATGTaGCAGAGTGACCGCTGGCAC +
Preference number: 4 (lower is better)
Translates to: LCGQGGECPEVHGVWGGFKKEVM*QSDRWH
Trigger: GTGCCAGCGGTCACTCTGCCACATCACTTCCTTCTT...AAACCCACCCCACACGCCATGGACCTCAGGGCACTCTCCTCCCTGCCCACAAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
CDS-3UTR CCA 90 bp GGAGGAGAGTGCCCTGAGGTCCATGGCGTGTGGGGTGGGTTTTCCACTGATGCTGGATATTCCCTGGACTaGGAATCCCCTGCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: GGECPEVHGVWGGFSTDAGYSLD*ESPASF
Trigger: GAAGCTGGCAGGGGATTCCCAGTCCAGGGAATATCC...AGCATCAGTGGAAAACCCACCCCACACGCCATGGACCTCAGGGCACTCTCCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
CDS-3UTR CCA 90 bp CCATCATATCCCTCCCCAGTCCGACACAGCCAGAGGGGTCCTGAGTGGCCCAAGGAAATTGTAGGAGCGTaGGTGCCTCTGCTTCCACTG +
Preference number: 4 (lower is better)
Translates to: PSYPSPVRHSQRGPEWPKEIVGA*VPLLPL
Trigger: CAGTGGAAGCAGAGGCACCCACGCTCCTACAATTTC...CTTGGGCCACTCAGGACCCCTCTGGCTGTGTCGGACTGGGGAGGGATATGATGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533380.5
CDS-3UTR TCA 90 bp AGTGCCCTGAGGTCCATGGCGTGTGGGGTGGGTTTTCCACTGATGCTCTTCATCTGCCCATACATGACGTaGGGCCTCTCCCAGGGATTG +
Preference number: 4 (lower is better)
Translates to: SALRSMACGVGFPLMLFICPYMT*GLSQGL
Trigger: CAATCCCTGGGAGAGGCCTCACGTCATGTATGGGCA...GATGAAGAGCATCAGTGGAAAACCCACCCCACACGCCATGGACCTCAGGGCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000525243.5
ENST00000526549.5
ENST00000530137.1
ENST00000533380.5
CDS-3UTR TCA 90 bp CCAATGATGACAGGCTGCCAGGCTACCAAGTATCGAAGCCAGTCCAGCAGTTGCGCAGTTGCCCATACATaGCGTGAGGCCTCTCCCAGG +
Preference number: 4 (lower is better)
Translates to: PMMTGCQATKYRSQSSSCAVAHT*REASPR
Trigger: CCTGGGAGAGGCCTCACGTCATGTATGGGCAACTGC...GCAACTGCTGGACTGGCTTCGATACTTGGTAGCCTGGCAGCCTGTCATCATTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393713.7
ENST00000525243.5
ENST00000526549.5
ENST00000530655.5
CDS-3UTR TCA 90 bp CAGGGAGGAGAGTGCCCTGAGGTCCATGGCGTGTGGGGTGGGTTTTCCACTGATGGCCCAGGATGTAGTTaGTGCCTTGGACTACACCAA +
Preference number: 4 (lower is better)
Translates to: QGGECPEVHGVWGGFSTDGPGCS*CLGLHQ
Trigger: TTGGTGTAGTCCAAGGCATCAACTACATCCTGGGCC...ATCAGTGGAAAACCCACCCCACACGCCATGGACCTCAGGGCACTCTCCTCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000525243.5
ENST00000526549.5
ENST00000530137.1
ENST00000533380.5
CDS-3UTR TCA 90 bp ACAGCCAGAGGGGTCCTGAGTGGCCCAAGCACCCCTTTGAGTCTTTCCCACCCAGGCCCAGGATGTAGTTaGTGCCTTGGACTACACCAA +
Preference number: 4 (lower is better)
Translates to: TARGVLSGPSTPLSLSHPGPGCS*CLGLHQ
Trigger: TTGGTGTAGTCCAAGGCATCAACTACATCCTGGGCC...TGGGTGGGAAAGACTCAAAGGGGTGCTTGGGCCACTCAGGACCCCTCTGGCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
ENST00000533380.5
CDS-3UTR TCA 90 bp TTCTCAATGATCCCCTCTTCACTGACGTCCACAAAGATCTGCTGCCCACACACAGGGAGGAGAGTGCCCTaGGGTCCATGGCGTGTGGGG +
Preference number: 4 (lower is better)
Translates to: FSMIPSSLTSTKICCPHTGRRVP*GPWRVG
Trigger: CCCCACACGCCATGGACCTCAGGGCACTCTCCTCCC...TGTGTGTGGGCAGCAGATCTTTGTGGACGTCAGTGAAGAGGGGATCATTGAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526549.5
CDS-3UTR TCA 90 bp AAGGCTCCTTTAAACCAAAAATGTCATGGCTCTGCCCCCACCCTGCTTAGGCAGAGGGAGTGGGTGGGCTaGGGCCTTCAGCTACCTGGG +
Preference number: 4 (lower is better)
Translates to: KAPLNQKCHGSAPTLLRQREWVG*GLQLPG
Trigger: CCCAGGTAGCTGAAGGCCTCAGCCCACCCACTCCCT...CTGCCTAAGCAGGGTGGGGGCAGAGCCATGACATTTTTGGTTTAAAGGAGCCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
CDS-3UTR GCA 90 bp GACAGGCTGCCAGGCTACCAAGTATCGAAGCCAGTCCAGCAGTTGCCCATACATGCTTCATGGCCACGGTaGTTGGCATGCATGCGTGCG +
Preference number: 4 (lower is better)
Translates to: DRLPGYQVSKPVQQLPIHASWPR*LACMRA
Trigger: CGCACGCATGCATGCCAAGCACCGTGGCCATGAAGC...ATGTATGGGCAACTGCTGGACTGGCTTCGATACTTGGTAGCCTGGCAGCCTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393713.7
ENST00000525243.5
ENST00000526549.5
ENST00000530655.5
CDS-3UTR GCA 90 bp ATGACAGGCTGCCAGGCTACCAAGTATCGAAGCCAGTCCAGCAGTTGCCCATACGCTTCATGGCCACGGTaGTTGGCATGCATGCGTGCG +
Preference number: 4 (lower is better)
Translates to: MTGCQATKYRSQSSSCPYASWPR*LACMRA
Trigger: CGCACGCATGCATGCCAAGCACCGTGGCCATGAAGC...GTATGGGCAACTGCTGGACTGGCTTCGATACTTGGTAGCCTGGCAGCCTGTCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393713.7
ENST00000525243.5
ENST00000526549.5
ENST00000530655.5
CDS-3UTR GCA 90 bp GGAGAGTGCCCTGAGGTCCATGGCGTGTGGGGTGGGTTTTCCACTGATGCTCTTGGCCACCACCAAGGTTaGGATGAGGATGAGGACCAT +
Preference number: 4 (lower is better)
Translates to: GECPEVHGVWGGFSTDALGHHQG*DEDEDH
Trigger: ATGGTCCTCATCCTCATCGCAACCTTGGTGGTGGCC...AAGAGCATCAGTGGAAAACCCACCCCACACGCCATGGACCTCAGGGCACTCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000525243.5
ENST00000526549.5
ENST00000530137.1
ENST00000533380.5
CDS-3UTR GCA 90 bp CCTTGGACTACACCAATGATGACAGGCTGCCAGGCTACCAAGTATCGAAGCCAGGAGCGTGGGTGCCTCTaGTTCCACTGCACCAGGAGC +
Preference number: 4 (lower is better)
Translates to: PWTTPMMTGCQATKYRSQERGCL*FHCTRS
Trigger: GCTCCTGGTGCAGTGGAAGCAGAGGCACCCACGCTC...CTGGCTTCGATACTTGGTAGCCTGGCAGCCTGTCATCATTGGTGTAGTCCAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393713.7
ENST00000525243.5
ENST00000526549.5
CDS-3UTR GCA 90 bp GGGGTCCTGAGTGGCCCAAGCACCCCTTTGAGTCTTTCCCACCCAGGAGGTCTTTGCACCAGCCACGGATaGAGAACTCGTGGAAGACAT +
Preference number: 4 (lower is better)
Translates to: GVLSGPSTPLSLSHPGGLCTSHG*RTRGRH
Trigger: ATGTCTTCCACGAGTTCTGCATCCGTGGCTGGTGCA...AAGACCTCCTGGGTGGGAAAGACTCAAAGGGGTGCTTGGGCCACTCAGGACCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000526549.5
ENST00000530137.1
ENST00000533380.5
CDS-3UTR GCA 90 bp CTTTGTGGGCAGGGAGGAGAGTGCCCTGAGGTCCATGGCGTGTGGGGTGGGTTTCCAATGATGACAGGCTaGCAGGCTACCAAGTATCGA +
Preference number: 4 (lower is better)
Translates to: LCGQGGECPEVHGVWGGFPMMTG*QATKYR
Trigger: TCGATACTTGGTAGCCTGGCAGCCTGTCATCATTGG...AAACCCACCCCACACGCCATGGACCTCAGGGCACTCTCCTCCCTGCCCACAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000525243.5
ENST00000526549.5
ENST00000530137.1
ENST00000533380.5
CDS-3UTR GCA 90 bp CCATCATATCCCTCCCCAGTCCGACACAGCCAGAGGGGTCCTGAGTGGCCCAAGCCAATGATGACAGGCTaGCAGGCTACCAAGTATCGA +
Preference number: 4 (lower is better)
Translates to: PSYPSPVRHSQRGPEWPKPMMTG*QATKYR
Trigger: TCGATACTTGGTAGCCTGGCAGCCTGTCATCATTGG...CTTGGGCCACTCAGGACCCCTCTGGCTGTGTCGGACTGGGGAGGGATATGATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
ENST00000533380.5
CDS-3UTR GCA 90 bp AGTGCCCTGAGGTCCATGGCGTGTGGGGTGGGTTTTCCACTGATGCTCTTCATCGCCGTCAGTCATGGCTaGCAACAATTGCCCCATGGC +
Preference number: 4 (lower is better)
Translates to: SALRSMACGVGFPLMLFIAVSHG*QQLPHG
Trigger: GCCATGGGGCAATTGTTGGCAGCCATGACTGACGGC...GATGAAGAGCATCAGTGGAAAACCCACCCCACACGCCATGGACCTCAGGGCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
CDS-3UTR CCA 90 bp ACAGGCTGCCAGGCTACCAAGTATCGAAGCCAGTCCAGCAGTTGCCCATACATGCATGGCCACGGTGCTTaGCATGCATGCGTGCGTGCT +
Preference number: 4 (lower is better)
Translates to: TGCQATKYRSQSSSCPYMHGHGA*HACVRA
Trigger: AGCACGCACGCATGCATGCCAAGCACCGTGGCCATG...CATGTATGGGCAACTGCTGGACTGGCTTCGATACTTGGTAGCCTGGCAGCCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393713.7
ENST00000525243.5
ENST00000526549.5
ENST00000530655.5
CDS-3UTR CCA 90 bp CCTGAGGTCCATGGCGTGTGGGGTGGGTTTTCCACTGATGCTCTTCATCACTATCCCAGGAGGTCTTTGTaGGCAGGGAGGAGAGTGCCC +
Preference number: 4 (lower is better)
Translates to: PEVHGVWGGFSTDALHHYPRRSL*AGRRVP
Trigger: GGGCACTCTCCTCCCTGCCCACAAAGACCTCCTGGG...ATAGTGATGAAGAGCATCAGTGGAAAACCCACCCCACACGCCATGGACCTCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393713.7
ENST00000525243.5
ENST00000526549.5
CDS-3UTR CCA 90 bp CTGCCAGGCTACCAAGTATCGAAGCCAGTCCAGCAGTTGCCCATACATGACGTGCAGAGGGGTCCTGAGTaGCCCAAGCACCCCTTTGAG +
Preference number: 4 (lower is better)
Translates to: LPGYQVSKPVQQLPIHDVQRGPE*PKHPFE
Trigger: CTCAAAGGGGTGCTTGGGCCACTCAGGACCCCTCTG...CACGTCATGTATGGGCAACTGCTGGACTGGCTTCGATACTTGGTAGCCTGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393713.7
ENST00000526549.5
CDS-3UTR CCA 90 bp ACAGGCTGCCAGGCTACCAAGTATCGAAGCCAGTCCAGCAGTTGCCCATACATGTGGCAGAGTGACCGCTaGCACGTGTCACCACTCCAC +
Preference number: 4 (lower is better)
Translates to: TGCQATKYRSQSSSCPYMWQSDR*HVSPLH
Trigger: GTGGAGTGGTGACACGTGCCAGCGGTCACTCTGCCA...CATGTATGGGCAACTGCTGGACTGGCTTCGATACTTGGTAGCCTGGCAGCCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393713.7
ENST00000526549.5
CDS-3UTR TCA 90 bp CCAATGATGACAGGCTGCCAGGCTACCAAGTATCGAAGCCAGTCCAGCAGTTGCTGCCCATACATGACGTaGGGCCTCTCCCAGGGATTG +
Preference number: 4 (lower is better)
Translates to: PMMTGCQATKYRSQSSSCCPYMT*GLSQGL
Trigger: CAATCCCTGGGAGAGGCCTCACGTCATGTATGGGCA...GCAACTGCTGGACTGGCTTCGATACTTGGTAGCCTGGCAGCCTGTCATCATTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393713.7
ENST00000525243.5
ENST00000526549.5
ENST00000530655.5
CDS-3UTR TCA 90 bp ACAGGCTGCCAGGCTACCAAGTATCGAAGCCAGTCCAGCAGTTGCCCATACATGTGCCCATACATGACGTaGGGCCTCTCCCAGGGATTG +
Preference number: 4 (lower is better)
Translates to: TGCQATKYRSQSSSCPYMCPYMT*GLSQGL
Trigger: CAATCCCTGGGAGAGGCCTCACGTCATGTATGGGCA...CATGTATGGGCAACTGCTGGACTGGCTTCGATACTTGGTAGCCTGGCAGCCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393713.7
ENST00000525243.5
ENST00000526549.5
ENST00000530655.5
CDS-3UTR TCA 90 bp ATGACAGGCTGCCAGGCTACCAAGTATCGAAGCCAGTCCAGCAGTTGCCCATACTGCCCATACATGACGTaGGGCCTCTCCCAGGGATTG +
Preference number: 4 (lower is better)
Translates to: MTGCQATKYRSQSSSCPYCPYMT*GLSQGL
Trigger: CAATCCCTGGGAGAGGCCTCACGTCATGTATGGGCA...GTATGGGCAACTGCTGGACTGGCTTCGATACTTGGTAGCCTGGCAGCCTGTCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393713.7
ENST00000525243.5
ENST00000526549.5
ENST00000530655.5
CDS-3UTR TCA 90 bp AAGAATGAGCTTGCACAAGGGGCCGTCAGTCATGGCTGCCAACAATTGCCCCATGCAGTTGCCCATACATaGCGTGAGGCCTCTCCCAGG +
Preference number: 4 (lower is better)
Translates to: KNELAQGAVSHGCQQLPHAVAHT*REASPR
Trigger: CCTGGGAGAGGCCTCACGTCATGTATGGGCAACTGC...ATGGGGCAATTGTTGGCAGCCATGACTGACGGCCCCTTGTGCAAGCTCATTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
CDS-3UTR TCA 90 bp GAGAGTGCCCTGAGGTCCATGGCGTGTGGGGTGGGTTTTCCACTGATGCTCTTCGGCCCAGGATGTAGTTaGTGCCTTGGACTACACCAA +
Preference number: 4 (lower is better)
Translates to: ESALRSMACGVGFPLMLFGPGCS*CLGLHQ
Trigger: TTGGTGTAGTCCAAGGCATCAACTACATCCTGGGCC...GAAGAGCATCAGTGGAAAACCCACCCCACACGCCATGGACCTCAGGGCACTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000525243.5
ENST00000526549.5
ENST00000530137.1
ENST00000533380.5
CDS-3UTR TCA 90 bp TTCTCGGCCAGAGATGAGAAGGCTCCTTTAAACCAAAAATGTCATGGCTCTGCCGGGAGGAGAGTGCCCTaGGGTCCATGGCGTGTGGGG +
Preference number: 4 (lower is better)
Translates to: FSARDEKAPLNQKCHGSAGRRVP*GPWRVG
Trigger: CCCCACACGCCATGGACCTCAGGGCACTCTCCTCCC...GGCAGAGCCATGACATTTTTGGTTTAAAGGAGCCTTCTCATCTCTGGCCGAGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
CDS-3UTR TCA 90 bp AGTGCCCTGAGGTCCATGGCGTGTGGGGTGGGTTTTCCACTGATGCTCTTCATCAGGGGCAGGCCCTACTaGGCCATATTCCCTAGAAAC +
Preference number: 4 (lower is better)
Translates to: SALRSMACGVGFPLMLFIRGRPY*AIFPRN
Trigger: GTTTCTAGGGAATATGGCTCAGTAGGGCCTGCCCCT...GATGAAGAGCATCAGTGGAAAACCCACCCCACACGCCATGGACCTCAGGGCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
CDS-3UTR TCA 90 bp AGTGCCCTGAGGTCCATGGCGTGTGGGGTGGGTTTTCCACTGATGCTCTTCATCAGAACTCGTGGAAGCTaGGCACCGCCCTATGGTAGA +
Preference number: 4 (lower is better)
Translates to: SALRSMACGVGFPLMLFIRTRGS*APPYGR
Trigger: TCTACCATAGGGCGGTGCTCAGCTTCCACGAGTTCT...GATGAAGAGCATCAGTGGAAAACCCACCCCACACGCCATGGACCTCAGGGCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393713.7
CDS-3UTR TCA 90 bp AGGGAGGACACCTGGGGCCTCAGTGCTCACCCGTGGCACAAGCCTGAGTACGTTTCCTGGCTAACACAGTaGAACCCCGTCTCTAATTGT +
Preference number: 4 (lower is better)
Translates to: REDTWGLSAHPWHKPEYVSWLTQ*NPVSNC
Trigger: ACAATTAGAGACGGGGTTTCACTGTGTTAGCCAGGA...AACGTACTCAGGCTTGTGCCACGGGTGAGCACTGAGGCCCCAGGTGTCCTCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526549.5
CDS-3UTR GCA 90 bp GTGTTCTCAATGATCCCCTCTTCACTGACGTCCACAAAGATCTGCTGCCCACACCTCCACCTCCACCACTaGCGCCATCTTCACGGCTCG +
Preference number: 4 (lower is better)
Translates to: VFSMIPSSLTSTKICCPHLHLHH*RHLHGS
Trigger: CGAGCCGTGAAGATGGCGGCAGTGGTGGAGGTGGAG...GTGTGGGCAGCAGATCTTTGTGGACGTCAGTGAAGAGGGGATCATTGAGAACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530655.5
CDS-3UTR GCA 90 bp CCAATGATGACAGGCTGCCAGGCTACCAAGTATCGAAGCCAGTCCAGCAGTTGCCTTGGCATGCATGCGTaGGTGCTCGACCCTCCATTG +
Preference number: 4 (lower is better)
Translates to: PMMTGCQATKYRSQSSSCLGMHA*VLDPPL
Trigger: CAATGGAGGGTCGAGCACGCACGCATGCATGCCAAG...GCAACTGCTGGACTGGCTTCGATACTTGGTAGCCTGGCAGCCTGTCATCATTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525243.5
CDS-3UTR GCA 90 bp AGAGGTTTTCGGGTGGCTCGGAAGGTAACAAAGGCTGTGACAGCAGAGAACAAGGGTGCTTGGCATGCATaGGTGCGTGCTCGACCCTCC +
Preference number: 4 (lower is better)
Translates to: RGFRVARKVTKAVTAENKGAWHA*VRARPS
Trigger: GGAGGGTCGAGCACGCACGCATGCATGCCAAGCACC...CTTGTTCTCTGCTGTCACAGCCTTTGTTACCTTCCGAGCCACCCGAAAACCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393711.7
ENST00000530058.5
CDS-3UTR GCA 90 bp GTCTGTACTAGAGGTTTTCGGGTGGCTCGGAAGGTAACAAAGGCTGTGACAGCACCACGGTGCTTGGCATaGATGCGTGCGTGCTCGACC +
Preference number: 4 (lower is better)
Translates to: VCTRGFRVARKVTKAVTAPRCLA*MRACST
Trigger: GGTCGAGCACGCACGCATGCATGCCAAGCACCGTGG...TGCTGTCACAGCCTTTGTTACCTTCCGAGCCACCCGAAAACCTCTAGTACAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393711.7
ENST00000526549.5
ENST00000530058.5
CDS-3UTR GCA 90 bp GGGGTTGTCTGTACTAGAGGTTTTCGGGTGGCTCGGAAGGTAACAAAGGCTGTGGCTTCATGGCCACGGTaGTTGGCATGCATGCGTGCG +
Preference number: 4 (lower is better)
Translates to: GVVCTRGFRVARKVTKAVASWPR*LACMRA
Trigger: CGCACGCATGCATGCCAAGCACCGTGGCCATGAAGC...CACAGCCTTTGTTACCTTCCGAGCCACCCGAAAACCTCTAGTACAGACAACCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393711.7
ENST00000526549.5
ENST00000530058.5
CDS-3UTR GCA 90 bp CAGGGAGGAGAGTGCCCTGAGGTCCATGGCGTGTGGGGTGGGTTTTCCACTGATAGGACCATTTCAGCATaGATAGCTTCATGGCCACGG +
Preference number: 4 (lower is better)
Translates to: QGGECPEVHGVWGGFSTDRTISA*IASWPR
Trigger: CCGTGGCCATGAAGCTATGCATGCTGAAATGGTCCT...ATCAGTGGAAAACCCACCCCACACGCCATGGACCTCAGGGCACTCTCCTCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000525243.5
ENST00000526549.5
ENST00000530137.1
ENST00000533380.5
CDS-3UTR GCA 90 bp GAGTGCCCTGAGGTCCATGGCGTGTGGGGTGGGTTTTCCACTGATGCTCTTCATGGCCACCACCAAGGTTaGGATGAGGATGAGGACCAT +
Preference number: 4 (lower is better)
Translates to: ECPEVHGVWGGFSTDALHGHHQG*DEDEDH
Trigger: ATGGTCCTCATCCTCATCGCAACCTTGGTGGTGGCC...ATGAAGAGCATCAGTGGAAAACCCACCCCACACGCCATGGACCTCAGGGCACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000525243.5
ENST00000526549.5
ENST00000530137.1
ENST00000533380.5
CDS-3UTR GCA 90 bp AGTGCCCTGAGGTCCATGGCGTGTGGGGTGGGTTTTCCACTGATGCTCTTCATCGGCCACCACCAAGGTTaGGATGAGGATGAGGACCAT +
Preference number: 4 (lower is better)
Translates to: SALRSMACGVGFPLMLFIGHHQG*DEDEDH
Trigger: ATGGTCCTCATCCTCATCGCAACCTTGGTGGTGGCC...GATGAAGAGCATCAGTGGAAAACCCACCCCACACGCCATGGACCTCAGGGCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000525243.5
ENST00000526549.5
ENST00000530137.1
ENST00000533380.5
CDS-3UTR GCA 90 bp GTCTGTACTAGAGGTTTTCGGGTGGCTCGGAAGGTAACAAAGGCTGTGACAGCAGAGCGTGGGTGCCTCTaGTTCCACTGCACCAGGAGC +
Preference number: 4 (lower is better)
Translates to: VCTRGFRVARKVTKAVTAERGCL*FHCTRS
Trigger: GCTCCTGGTGCAGTGGAAGCAGAGGCACCCACGCTC...TGCTGTCACAGCCTTTGTTACCTTCCGAGCCACCCGAAAACCTCTAGTACAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393711.7
ENST00000526549.5
ENST00000530058.5
CDS-3UTR GCA 90 bp GTCCGACACAGCCAGAGGGGTCCTGAGTGGCCCAAGCACCCCTTTGAGTCTTTCTCCACAAAGATCTGCTaGCCACACACAGCACACACA +
Preference number: 4 (lower is better)
Translates to: VRHSQRGPEWPKHPFESFSTKIC*PHTAHT
Trigger: TGTGTGTGCTGTGTGTGGGCAGCAGATCTTTGTGGA...GAAAGACTCAAAGGGGTGCTTGGGCCACTCAGGACCCCTCTGGCTGTGTCGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000526549.5
ENST00000530137.1
ENST00000533380.5
CDS-3UTR GCA 90 bp CAGGGAGGAGAGTGCCCTGAGGTCCATGGCGTGTGGGGTGGGTTTTCCACTGATTCCACAAAGATCTGCTaGCCACACACAGCACACACA +
Preference number: 4 (lower is better)
Translates to: QGGECPEVHGVWGGFSTDSTKIC*PHTAHT
Trigger: TGTGTGTGCTGTGTGTGGGCAGCAGATCTTTGTGGA...ATCAGTGGAAAACCCACCCCACACGCCATGGACCTCAGGGCACTCTCCTCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361756.8
ENST00000525243.5
ENST00000526549.5
ENST00000530137.1
ENST00000533380.5
CDS-3UTR GCA 90 bp GAGAGTGCCCTGAGGTCCATGGCGTGTGGGGTGGGTTTTCCACTGATGCTCTTCACGTCCACAAAGATCTaGTGCCCACACACAGCACAC +
Preference number: 4 (lower is better)
Translates to: ESALRSMACGVGFPLMLFTSTKI*CPHTAH
Trigger: GTGTGCTGTGTGTGGGCAGCAGATCTTTGTGGACGT...GAAGAGCATCAGTGGAAAACCCACCCCACACGCCATGGACCTCAGGGCACTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361756.8
ENST00000525243.5
ENST00000526549.5
ENST00000530137.1
ENST00000533380.5
CDS-3UTR GCA 90 bp CTTTGTGGGCAGGGAGGAGAGTGCCCTGAGGTCCATGGCGTGTGGGGTGGGTTTCGTGGAAGACATGATTaGAGGACAGCCTATACGTGT +
Preference number: 4 (lower is better)
Translates to: LCGQGGECPEVHGVWGGFRGRHD*RTAYTC
Trigger: ACACGTATAGGCTGTCCTGCAATCATGTCTTCCACG...AAACCCACCCCACACGCCATGGACCTCAGGGCACTCTCCTCCCTGCCCACAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361756.8
ENST00000525243.5
ENST00000526549.5
ENST00000530137.1
ENST00000533380.5
CDS-3UTR GCA 90 bp CAGGGAGGAGAGTGCCCTGAGGTCCATGGCGTGTGGGGTGGGTTTTCCACTGATCCAATGATGACAGGCTaGCAGGCTACCAAGTATCGA +
Preference number: 4 (lower is better)
Translates to: QGGECPEVHGVWGGFSTDPMMTG*QATKYR
Trigger: TCGATACTTGGTAGCCTGGCAGCCTGTCATCATTGG...ATCAGTGGAAAACCCACCCCACACGCCATGGACCTCAGGGCACTCTCCTCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000525243.5
ENST00000526549.5
ENST00000530137.1
ENST00000533380.5
CDS-3UTR GCA 90 bp TTTTCGGGTGGCTCGGAAGGTAACAAAGGCTGTGACAGCAGAGAACAAGATCCAGGGCAGGGAGGAGAGTaGCCTGAGGTCCATGGCGTG +
Preference number: 4 (lower is better)
Translates to: FSGGSEGNKGCDSREQDPGQGGE*PEVHGV
Trigger: CACGCCATGGACCTCAGGGCACTCTCCTCCCTGCCC...TGGATCTTGTTCTCTGCTGTCACAGCCTTTGTTACCTTCCGAGCCACCCGAAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526549.5
CDS-3UTR CCA 90 bp CCTGAGGTCCATGGCGTGTGGGGTGGGTTTTCCACTGATGCTCTTCATCACTATCATGGCCACGGTGCTTaGCATGCATGCGTGCGTGCT +
Preference number: 4 (lower is better)
Translates to: PEVHGVWGGFSTDALHHYHGHGA*HACVRA
Trigger: AGCACGCACGCATGCATGCCAAGCACCGTGGCCATG...ATAGTGATGAAGAGCATCAGTGGAAAACCCACCCCACACGCCATGGACCTCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393713.7
ENST00000525243.5
ENST00000526549.5
CDS-3UTR CCA 90 bp AGTGCCCTGAGGTCCATGGCGTGTGGGGTGGGTTTTCCACTGATGCTCTTCATCGCATGCATAGCTTCATaGCCACGGTGCTTGGCATGC +
Preference number: 4 (lower is better)
Translates to: SALRSMACGVGFPLMLFIACIAS*PRCLAC
Trigger: GCATGCCAAGCACCGTGGCCATGAAGCTATGCATGC...GATGAAGAGCATCAGTGGAAAACCCACCCCACACGCCATGGACCTCAGGGCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000525243.5
ENST00000526549.5
ENST00000530137.1
ENST00000533380.5
CDS-3UTR CCA 90 bp GGTTTTCGGGTGGCTCGGAAGGTAACAAAGGCTGTGACAGCAGAGAACAAGATCTGCACCAGGAGCAGCTaGGCCACCACCAAGGTTGCG +
Preference number: 4 (lower is better)
Translates to: GFRVARKVTKAVTAENKICTRSS*ATTKVA
Trigger: CGCAACCTTGGTGGTGGCCCAGCTGCTCCTGGTGCA...GATCTTGTTCTCTGCTGTCACAGCCTTTGTTACCTTCCGAGCCACCCGAAAACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393711.7
ENST00000526549.5
ENST00000530058.5
CDS-3UTR CCA 90 bp AAGAATGAGCTTGCACAAGGGGCCGTCAGTCATGGCTGCCAACAATTGCCCCATCAGAGGGGTCCTGAGTaGCCCAAGCACCCCTTTGAG +
Preference number: 4 (lower is better)
Translates to: KNELAQGAVSHGCQQLPHQRGPE*PKHPFE
Trigger: CTCAAAGGGGTGCTTGGGCCACTCAGGACCCCTCTG...ATGGGGCAATTGTTGGCAGCCATGACTGACGGCCCCTTGTGCAAGCTCATTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
CDS-3UTR CCA 90 bp CGACACAGCCAGAGGGGTCCTGAGTGGCCCAAGCACCCCTTTGAGTCTTTCCCAAAACCAAAAATGTCATaGCTCTGCCCCCACCCTGCT +
Preference number: 4 (lower is better)
Translates to: RHSQRGPEWPKHPFESFPKPKMS*LCPHPA
Trigger: AGCAGGGTGGGGGCAGAGCCATGACATTTTTGGTTT...TGGGAAAGACTCAAAGGGGTGCTTGGGCCACTCAGGACCCCTCTGGCTGTGTCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
CDS-3UTR CCA 90 bp ATGACAGGCTGCCAGGCTACCAAGTATCGAAGCCAGTCCAGCAGTTGCCCATACAGGCCTTCAGCTACCTaGGAGCCCAGCAGTGTTCTC +
Preference number: 4 (lower is better)
Translates to: MTGCQATKYRSQSSSCPYRPSAT*EPSSVL
Trigger: GAGAACACTGCTGGGCTCCCAGGTAGCTGAAGGCCT...GTATGGGCAACTGCTGGACTGGCTTCGATACTTGGTAGCCTGGCAGCCTGTCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393713.7
ENST00000526549.5
CDS-3UTR CCA 90 bp GTGACAACATCCTGCTTCGTTCTTGCTGCCCTTGAAGGGGCAGGCCCTACTGAGCTCAGTGCTCACCCGTaGCACAAGCCTGAGTACGTT +
Preference number: 4 (lower is better)
Translates to: VTTSCFVLAALEGAGPTELSAHP*HKPEYV
Trigger: AACGTACTCAGGCTTGTGCCACGGGTGAGCACTGAG...CTCAGTAGGGCCTGCCCCTTCAAGGGCAGCAAGAACGAAGCAGGATGTTGTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
CDS-3UTR CCA 90 bp CCTGAGGTCCATGGCGTGTGGGGTGGGTTTTCCACTGATGCTCTTCATCACTATTGGCAGAGTGACCGCTaGCACGTGTCACCACTCCAC +
Preference number: 4 (lower is better)
Translates to: PEVHGVWGGFSTDALHHYWQSDR*HVSPLH
Trigger: GTGGAGTGGTGACACGTGCCAGCGGTCACTCTGCCA...ATAGTGATGAAGAGCATCAGTGGAAAACCCACCCCACACGCCATGGACCTCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393713.7
ENST00000526549.5
3UTR CAA 72 bp CTGCCAGGCTACCAAGTATCGAAGCCAGTCCAGCAGTaGCCCATACATGACGTGAGGCCTCTCCCAGGGATT +
Preference number: 4 (lower is better)
Translates to: LPGYQVSKPVQQ*PIHDVRPLPGI
Trigger: AATCCCTGGGAGAGGCCTCACGTCATGTATGGGCAACTGCTGGACTGGCTTCGATACTTGGTAGCCTGGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393713.7
ENST00000525243.5
ENST00000526549.5
ENST00000530655.5
CDS-3UTR TCA 90 bp GGCAGGGAGGAGAGTGCCCTGAGGTCCATGGCGTGTGGGGTGGGTTTTCCACTGTGCCAGTGGCATAGCTaGTTTTATAGATTAGCAGGA +
Preference number: 4 (lower is better)
Translates to: GREESALRSMACGVGFPLCQWHS*FYRLAG
Trigger: TCCTGCTAATCTATAAAATCAGCTATGCCACTGGCA...CAGTGGAAAACCCACCCCACACGCCATGGACCTCAGGGCACTCTCCTCCCTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
CDS-3UTR TCA 90 bp GAGTGCCCTGAGGTCCATGGCGTGTGGGGTGGGTTTTCCACTGATGCTCTTCATGGCCCAGGATGTAGTTaGTGCCTTGGACTACACCAA +
Preference number: 4 (lower is better)
Translates to: ECPEVHGVWGGFSTDALHGPGCS*CLGLHQ
Trigger: TTGGTGTAGTCCAAGGCATCAACTACATCCTGGGCC...ATGAAGAGCATCAGTGGAAAACCCACCCCACACGCCATGGACCTCAGGGCACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000525243.5
ENST00000526549.5
ENST00000530137.1
ENST00000533380.5
CDS-3UTR TCA 90 bp CAGGGAGGAGAGTGCCCTGAGGTCCATGGCGTGTGGGGTGGGTTTTCCACTGATGGGTGGGTTTTCCACTaGTGCTCTTCATCACTATTC +
Preference number: 4 (lower is better)
Translates to: QGGECPEVHGVWGGFSTDGWVFH*CSSSLF
Trigger: GAATAGTGATGAAGAGCATCAGTGGAAAACCCACCC...ATCAGTGGAAAACCCACCCCACACGCCATGGACCTCAGGGCACTCTCCTCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000525243.5
ENST00000526549.5
ENST00000530137.1
ENST00000533380.5
CDS-3UTR TCA 90 bp ACAGCCAGAGGGGTCCTGAGTGGCCCAAGCACCCCTTTGAGTCTTTCCCACCCAGGGTGGGTTTTCCACTaGTGCTCTTCATCACTATTC +
Preference number: 4 (lower is better)
Translates to: TARGVLSGPSTPLSLSHPGWVFH*CSSSLF
Trigger: GAATAGTGATGAAGAGCATCAGTGGAAAACCCACCC...TGGGTGGGAAAGACTCAAAGGGGTGCTTGGGCCACTCAGGACCCCTCTGGCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
ENST00000533380.5
CDS-3UTR TCA 90 bp TTCTCGGCCAGAGATGAGAAGGCTCCTTTAAACCAAAAATGTCATGGCTCTGCCCAGCCAGAGGGGTCCTaGGTGGCCCAAGCACCCCTT +
Preference number: 4 (lower is better)
Translates to: FSARDEKAPLNQKCHGSAQPEGS*VAQAPL
Trigger: AAGGGGTGCTTGGGCCACTCAGGACCCCTCTGGCTG...GGCAGAGCCATGACATTTTTGGTTTAAAGGAGCCTTCTCATCTCTGGCCGAGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
CDS-3UTR TCA 90 bp TTCTCGGCCAGAGATGAGAAGGCTCCTTTAAACCAAAAATGTCATGGCTCTGCCAGGGAGTGGGTGGGCTaGGGCCTTCAGCTACCTGGG +
Preference number: 4 (lower is better)
Translates to: FSARDEKAPLNQKCHGSAREWVG*GLQLPG
Trigger: CCCAGGTAGCTGAAGGCCTCAGCCCACCCACTCCCT...GGCAGAGCCATGACATTTTTGGTTTAAAGGAGCCTTCTCATCTCTGGCCGAGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
CDS-3UTR TCA 90 bp AAGGCTCCTTTAAACCAAAAATGTCATGGCTCTGCCCCCACCCTGCTTAGGCAGACCTCTATTCTTGGCTaGCCACAGCCCTGCCCACGG +
Preference number: 4 (lower is better)
Translates to: KAPLNQKCHGSAPTLLRQTSILG*PQPCPR
Trigger: CCGTGGGCAGGGCTGTGGTCAGCCAAGAATAGAGGT...CTGCCTAAGCAGGGTGGGGGCAGAGCCATGACATTTTTGGTTTAAAGGAGCCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
CDS-3UTR TCA 90 bp GGAGGAGAGTGCCCTGAGGTCCATGGCGTGTGGGGTGGGTTTTCCACTGATGCTCATGGCCCAACTATATaGCCTCTATTCTTGGCTGAC +
Preference number: 4 (lower is better)
Translates to: GGECPEVHGVWGGFSTDAHGPTI*PLFLAD
Trigger: GTCAGCCAAGAATAGAGGTCATATAGTTGGGCCATG...AGCATCAGTGGAAAACCCACCCCACACGCCATGGACCTCAGGGCACTCTCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
CDS-3UTR TCA 90 bp CGACACAGCCAGAGGGGTCCTGAGTGGCCCAAGCACCCCTTTGAGTCTTTCCCACAAGGACATATCATCTaGCACAGGGAGAAGCTGACA +
Preference number: 4 (lower is better)
Translates to: RHSQRGPEWPKHPFESFPQGHII*HREKLT
Trigger: TGTCAGCTTCTCCCTGTGTCAGATGATATGTCCTTG...TGGGAAAGACTCAAAGGGGTGCTTGGGCCACTCAGGACCCCTCTGGCTGTGTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
CDS-3UTR TCA 90 bp GTCCGACACAGCCAGAGGGGTCCTGAGTGGCCCAAGCACCCCTTTGAGTCTTTCTTATTCAGACGGGAGTaGCAACATCCTGCTTCGTTC +
Preference number: 4 (lower is better)
Translates to: VRHSQRGPEWPKHPFESFLFRRE*QHPASF
Trigger: GAACGAAGCAGGATGTTGTCACTCCCGTCTGAATAA...GAAAGACTCAAAGGGGTGCTTGGGCCACTCAGGACCCCTCTGGCTGTGTCGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
CDS-3UTR TCA 90 bp ACCAACCTTGGGGTTGTCTGTACTAGAGGTTTTCGGGTGGCTCGGAAGGTAACAGGCAGATGGATCGCTTaGGCCCAGGAGCTTGAGACC +
Preference number: 4 (lower is better)
Translates to: TNLGVVCTRGFRVARKVTGRWIA*AQELET
Trigger: GGTCTCAAGCTCCTGGGCTCAAGCGATCCATCTGCC...TGTTACCTTCCGAGCCACCCGAAAACCTCTAGTACAGACAACCCCAAGGTTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393711.7
CDS-3UTR GCA 90 bp TTTTCGGGTGGCTCGGAAGGTAACAAAGGCTGTGACAGCAGAGAACAAGATCCACTCCACCTCCACCACTaGCGCCATCTTCACGGCTCG +
Preference number: 4 (lower is better)
Translates to: FSGGSEGNKGCDSREQDPLHLHH*RHLHGS
Trigger: CGAGCCGTGAAGATGGCGGCAGTGGTGGAGGTGGAG...TGGATCTTGTTCTCTGCTGTCACAGCCTTTGTTACCTTCCGAGCCACCCGAAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393711.7
ENST00000530058.5
CDS-3UTR GCA 90 bp ACAAAGGCTGTGACAGCAGAGAACAAGATCCAGATCACTAGGAACCTCCACCAGCTCCACCTCCACCACTaGCGCCATCTTCACGGCTCG +
Preference number: 4 (lower is better)
Translates to: TKAVTAENKIQITRNLHQLHLHH*RHLHGS
Trigger: CGAGCCGTGAAGATGGCGGCAGTGGTGGAGGTGGAG...CTGGTGGAGGTTCCTAGTGATCTGGATCTTGTTCTCTGCTGTCACAGCCTTTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393711.7
ENST00000530058.5
CDS-3UTR GCA 90 bp GCCTTGGACTACACCAATGATGACAGGCTGCCAGGCTACCAAGTATCGAAGCCAGCATGCATGCGTGCGTaGTCGACCCTCCATTGCTCT +
Preference number: 4 (lower is better)
Translates to: ALDYTNDDRLPGYQVSKPACMRA*STLHCS
Trigger: AGAGCAATGGAGGGTCGAGCACGCACGCATGCATGC...TGGCTTCGATACTTGGTAGCCTGGCAGCCTGTCATCATTGGTGTAGTCCAAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525243.5
CDS-3UTR GCA 90 bp TTCTCAATGATCCCCTCTTCACTGACGTCCACAAAGATCTGCTGCCCACACACACCACGGTGCTTGGCATaGATGCGTGCGTGCTCGACC +
Preference number: 4 (lower is better)
Translates to: FSMIPSSLTSTKICCPHTPRCLA*MRACST
Trigger: GGTCGAGCACGCACGCATGCATGCCAAGCACCGTGG...TGTGTGTGGGCAGCAGATCTTTGTGGACGTCAGTGAAGAGGGGATCATTGAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526549.5
ENST00000530655.5
CDS-3UTR GCA 90 bp GTGGCTCGGAAGGTAACAAAGGCTGTGACAGCAGAGAACAAGATCCAGATCACTCCACGGTGCTTGGCATaGATGCGTGCGTGCTCGACC +
Preference number: 4 (lower is better)
Translates to: VARKVTKAVTAENKIQITPRCLA*MRACST
Trigger: GGTCGAGCACGCACGCATGCATGCCAAGCACCGTGG...AGTGATCTGGATCTTGTTCTCTGCTGTCACAGCCTTTGTTACCTTCCGAGCCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393711.7
ENST00000526549.5
ENST00000530058.5
CDS-3UTR GCA 90 bp AGAGATGAGAAGGCTCCTTTAAACCAAAAATGTCATGGCTCTGCCCCCACCCTGCCACGGTGCTTGGCATaGATGCGTGCGTGCTCGACC +
Preference number: 4 (lower is better)
Translates to: RDEKAPLNQKCHGSAPTLPRCLA*MRACST
Trigger: GGTCGAGCACGCACGCATGCATGCCAAGCACCGTGG...CAGGGTGGGGGCAGAGCCATGACATTTTTGGTTTAAAGGAGCCTTCTCATCTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
CDS-3UTR GCA 90 bp ACGGATGCAGAACTCGTGGAAGACATGATTGCAGGACAGCCTATACGTGTTCTCCCACGGTGCTTGGCATaGATGCGTGCGTGCTCGACC +
Preference number: 4 (lower is better)
Translates to: TDAELVEDMIAGQPIRVLPRCLA*MRACST
Trigger: GGTCGAGCACGCACGCATGCATGCCAAGCACCGTGG...GAGAACACGTATAGGCTGTCCTGCAATCATGTCTTCCACGAGTTCTGCATCCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525243.5
ENST00000526549.5
ENST00000530655.5
CDS-3UTR GCA 90 bp ACGGGAGTGACAACATCCTGCTTCGTTCTTGCTGCCCTTGAAGGGGCAGGCCCTAGGACCATTTCAGCATaGATAGCTTCATGGCCACGG +
Preference number: 4 (lower is better)
Translates to: TGVTTSCFVLAALEGAGPRTISA*IASWPR
Trigger: CCGTGGCCATGAAGCTATGCATGCTGAAATGGTCCT...AGGGCCTGCCCCTTCAAGGGCAGCAAGAACGAAGCAGGATGTTGTCACTCCCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
CDS-3UTR GCA 90 bp CTGCCAGGCTACCAAGTATCGAAGCCAGTCCAGCAGTTGCCCATACATGACGTGGGCCACCACCAAGGTTaGGATGAGGATGAGGACCAT +
Preference number: 4 (lower is better)
Translates to: LPGYQVSKPVQQLPIHDVGHHQG*DEDEDH
Trigger: ATGGTCCTCATCCTCATCGCAACCTTGGTGGTGGCC...CACGTCATGTATGGGCAACTGCTGGACTGGCTTCGATACTTGGTAGCCTGGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393713.7
ENST00000525243.5
ENST00000526549.5
ENST00000530655.5
CDS-3UTR GCA 90 bp ATGACAGGCTGCCAGGCTACCAAGTATCGAAGCCAGTCCAGCAGTTGCCCATACGCTTCTTTCCCACGATaGACCAGCCACGGATGCAGA +
Preference number: 4 (lower is better)
Translates to: MTGCQATKYRSQSSSCPYASFPR*TSHGCR
Trigger: TCTGCATCCGTGGCTGGTGCATCGTGGGAAAGAAGC...GTATGGGCAACTGCTGGACTGGCTTCGATACTTGGTAGCCTGGCAGCCTGTCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393713.7
ENST00000525243.5
ENST00000526549.5
ENST00000530655.5
CDS-3UTR GCA 90 bp AGTGGCCCAAGCACCCCTTTGAGTCTTTCCCACCCAGGAGGTCTTTGTGGGCAGCCAATGATGACAGGCTaGCAGGCTACCAAGTATCGA +
Preference number: 4 (lower is better)
Translates to: SGPSTPLSLSHPGGLCGQPMMTG*QATKYR
Trigger: TCGATACTTGGTAGCCTGGCAGCCTGTCATCATTGG...CTGCCCACAAAGACCTCCTGGGTGGGAAAGACTCAAAGGGGTGCTTGGGCCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
ENST00000533380.5
CDS-3UTR GCA 90 bp GAAGGGGCAGGCCCTACTGAGCCATATTCCCTAGAAACCCAATGCCGAAGGCCCCCAATGATGACAGGCTaGCAGGCTACCAAGTATCGA +
Preference number: 4 (lower is better)
Translates to: EGAGPTEPYSLETQCRRPPMMTG*QATKYR
Trigger: TCGATACTTGGTAGCCTGGCAGCCTGTCATCATTGG...GGGCCTTCGGCATTGGGTTTCTAGGGAATATGGCTCAGTAGGGCCTGCCCCTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
CDS-3UTR GCA 90 bp AGCTCATGGAGCTTTATTCAGACGGGAGTGACAACATCCTGCTTCGTTCTTGCTGGGCAGGGAGGAGAGTaGCCTGAGGTCCATGGCGTG +
Preference number: 4 (lower is better)
Translates to: SSWSFIQTGVTTSCFVLAGQGGE*PEVHGV
Trigger: CACGCCATGGACCTCAGGGCACTCTCCTCCCTGCCC...AGCAAGAACGAAGCAGGATGTTGTCACTCCCGTCTGAATAAAGCTCCATGAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
CDS-3UTR GCA 90 bp ACGGGAGTGACAACATCCTGCTTCGTTCTTGCTGCCCTTGAAGGGGCAGGCCCTCTCTTCTATACTAAGTaGACCAGGCTTGAGCCCCAC +
Preference number: 4 (lower is better)
Translates to: TGVTTSCFVLAALEGAGPLFYTK*TRLEPH
Trigger: GTGGGGCTCAAGCCTGGTGCACTTAGTATAGAAGAG...AGGGCCTGCCCCTTCAAGGGCAGCAAGAACGAAGCAGGATGTTGTCACTCCCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
CDS-3UTR GCA 90 bp AAATCTTCAATGAATTCTGAGGCCCCAAGGCTTCCCTTGTTGGCCAAGTCACTGCACCTGGGGCCTCAGTaGTCACCCGTGGCACAAGCC +
Preference number: 4 (lower is better)
Translates to: KSSMNSEAPRLPLLAKSLHLGPQ*SPVAQA
Trigger: GGCTTGTGCCACGGGTGAGCACTGAGGCCCCAGGTG...CAGTGACTTGGCCAACAAGGGAAGCCTTGGGGCCTCAGAATTCATTGAAGATTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
CDS-3UTR GCA 90 bp ACAGCCAGAGGGGTCCTGAGTGGCCCAAGCACCCCTTTGAGTCTTTCCCACCCAATGGCTGCCAACAATTaGCCCATGGCCCAACTATAT +
Preference number: 4 (lower is better)
Translates to: TARGVLSGPSTPLSLSHPMAANN*PMAQLY
Trigger: ATATAGTTGGGCCATGGGGCAATTGTTGGCAGCCAT...TGGGTGGGAAAGACTCAAAGGGGTGCTTGGGCCACTCAGGACCCCTCTGGCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
CDS-3UTR GCA 90 bp ACGGGAGTGACAACATCCTGCTTCGTTCTTGCTGCCCTTGAAGGGGCAGGCCCTGGAGTGACAACATCCTaGTTCGTTCTTGCTGCCCTT +
Preference number: 4 (lower is better)
Translates to: TGVTTSCFVLAALEGAGPGVTTS*FVLAAL
Trigger: AAGGGCAGCAAGAACGAAGCAGGATGTTGTCACTCC...AGGGCCTGCCCCTTCAAGGGCAGCAAGAACGAAGCAGGATGTTGTCACTCCCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
CDS-3UTR GCA 90 bp CAGCAGAGAACAAGATCCAGATCACTAGGAACCTCCACCAGTGCAGCTTCACTGGCATGCATGCGTGCGTaGTCGACCCTCATCCAGCTC +
Preference number: 4 (lower is better)
Translates to: QQRTRSRSLGTSTSAASLACMRA*STLIQL
Trigger: GAGCTGGATGAGGGTCGAGCACGCACGCATGCATGC...CAGTGAAGCTGCACTGGTGGAGGTTCCTAGTGATCTGGATCTTGTTCTCTGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526549.5
CDS-3UTR GCA 90 bp TCACTGACGTCCACAAAGATCTGCTGCCCACACACAGCACACACACTGTCTGAAGCATGCATGCGTGCGTaGTCGACCCTCATCCAGCTC +
Preference number: 4 (lower is better)
Translates to: SLTSTKICCPHTAHTLSEACMRA*STLIQL
Trigger: GAGCTGGATGAGGGTCGAGCACGCACGCATGCATGC...TTCAGACAGTGTGTGTGCTGTGTGTGGGCAGCAGATCTTTGTGGACGTCAGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526549.5
ENST00000530655.5
CDS-3UTR CCA 90 bp GCTTCCCTTGTTGGCCAAGTCACTGATAAGGTTCCACTTGCCTCAACCAGCCTACATGGCCACGGTGCTTaGCATGCATGCGTGCGTGCT +
Preference number: 4 (lower is better)
Translates to: ASLVGQVTDKVPLASTSLHGHGA*HACVRA
Trigger: AGCACGCACGCATGCATGCCAAGCACCGTGGCCATG...TAGGCTGGTTGAGGCAAGTGGAACCTTATCAGTGACTTGGCCAACAAGGGAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
CDS-3UTR CCA 90 bp AGAGATGAGAAGGCTCCTTTAAACCAAAAATGTCATGGCTCTGCCCCCACCCTGTGCACCAGGAGCAGCTaGGCCACCACCAAGGTTGCG +
Preference number: 4 (lower is better)
Translates to: RDEKAPLNQKCHGSAPTLCTRSS*ATTKVA
Trigger: CGCAACCTTGGTGGTGGCCCAGCTGCTCCTGGTGCA...CAGGGTGGGGGCAGAGCCATGACATTTTTGGTTTAAAGGAGCCTTCTCATCTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
CDS-3UTR CCA 90 bp AGGTTTTCGGGTGGCTCGGAAGGTAACAAAGGCTGTGACAGCAGAGAACAAGATTGCACCAGGAGCAGCTaGGCCACCACCAAGGTTGCG +
Preference number: 4 (lower is better)
Translates to: RFSGGSEGNKGCDSREQDCTRSS*ATTKVA
Trigger: CGCAACCTTGGTGGTGGCCCAGCTGCTCCTGGTGCA...ATCTTGTTCTCTGCTGTCACAGCCTTTGTTACCTTCCGAGCCACCCGAAAACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393711.7
ENST00000526549.5
ENST00000530058.5
CDS-3UTR CCA 90 bp AGTGCCCTGAGGTCCATGGCGTGTGGGGTGGGTTTTCCACTGATGCTCTTCATCCATATTGTAGGAGCGTaGGTGCCTCTGCTTCCACTG +
Preference number: 4 (lower is better)
Translates to: SALRSMACGVGFPLMLFIHIVGA*VPLLPL
Trigger: CAGTGGAAGCAGAGGCACCCACGCTCCTACAATATG...GATGAAGAGCATCAGTGGAAAACCCACCCCACACGCCATGGACCTCAGGGCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000530137.1
CDS-3UTR CCA 90 bp ATGATGACAGGCTGCCAGGCTACCAAGTATCGAAGCCAGTCCAGCAGTTGCCCAGAGGTCCATGGCGTGTaGGGTGGGTTTTCCACTGAT +
Preference number: 4 (lower is better)
Translates to: MMTGCQATKYRSQSSSCPEVHGV*GGFSTD
Trigger: ATCAGTGGAAAACCCACCCCACACGCCATGGACCTC...TGGGCAACTGCTGGACTGGCTTCGATACTTGGTAGCCTGGCAGCCTGTCATCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393713.7
ENST00000525243.5
ENST00000526549.5
CDS-3UTR CCA 90 bp TTCAAGAAGGAAGTGATGTGGCAGAGTGACCGCTGGCACGTGTCACCACTCCACCCAGCCTATAGCTCTTaGACAGGGGGAGACAGAGTC +
Preference number: 4 (lower is better)
Translates to: FKKEVMWQSDRWHVSPLHPAYSS*TGGDRV
Trigger: GACTCTGTCTCCCCCTGTCCAAGAGCTATAGGCTGG...GTGGAGTGGTGACACGTGCCAGCGGTCACTCTGCCACATCACTTCCTTCTTGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
CDS-3UTR CCA 90 bp GGCGTGTGGGGTGGGTTTTCCACTGATGCTCTTCATCACTATTCCAGGCCCAGGAAGAAGGAAGTGATGTaGCAGAGTGACCGCTGGCAC +
Preference number: 4 (lower is better)
Translates to: GVWGGFSTDALHHYSRPRKKEVM*QSDRWH
Trigger: GTGCCAGCGGTCACTCTGCCACATCACTTCCTTCTT...CCTGGGCCTGGAATAGTGATGAAGAGCATCAGTGGAAAACCCACCCCACACGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393713.7
ENST00000526549.5
CDS-3UTR CCA 90 bp AAGCCAGTCCAGCAGTTGCCCATACATGACGTGAGGCCTCTCCCAGGGATTGCTAACATTGTAGGAGCGTaGGTGCCTCTGCTTCCACTG +
Preference number: 4 (lower is better)
Translates to: KPVQQLPIHDVRPLPGIANIVGA*VPLLPL
Trigger: CAGTGGAAGCAGAGGCACCCACGCTCCTACAATGTT...AGCAATCCCTGGGAGAGGCCTCACGTCATGTATGGGCAACTGCTGGACTGGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530655.5
CDS-3UTR TCA 90 bp AGGGAGGACACCTGGGGCCTCAGTGCTCACCCGTGGCACAAGCCTGAGTACGTTTGCCAGTGGCATAGCTaGTTTTATAGATTAGCAGGA +
Preference number: 4 (lower is better)
Translates to: REDTWGLSAHPWHKPEYVCQWHS*FYRLAG
Trigger: TCCTGCTAATCTATAAAATCAGCTATGCCACTGGCA...AACGTACTCAGGCTTGTGCCACGGGTGAGCACTGAGGCCCCAGGTGTCCTCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
CDS-3UTR TCA 90 bp CGACACAGCCAGAGGGGTCCTGAGTGGCCCAAGCACCCCTTTGAGTCTTTCCCAAGCACACACACTGTCTaGAAGATGTTTGGTAGGCAT +
Preference number: 4 (lower is better)
Translates to: RHSQRGPEWPKHPFESFPSTHTV*KMFGRH
Trigger: ATGCCTACCAAACATCTTTCAGACAGTGTGTGTGCT...TGGGAAAGACTCAAAGGGGTGCTTGGGCCACTCAGGACCCCTCTGGCTGTGTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000526549.5
ENST00000530137.1
ENST00000533380.5
CDS-3UTR TCA 90 bp GAGAGTGCCCTGAGGTCCATGGCGTGTGGGGTGGGTTTTCCACTGATGCTCTTCAACTCGTGGAAGACATaGTTGCAGGACAGCCTATAC +
Preference number: 4 (lower is better)
Translates to: ESALRSMACGVGFPLMLFNSWKT*LQDSLY
Trigger: GTATAGGCTGTCCTGCAATCATGTCTTCCACGAGTT...GAAGAGCATCAGTGGAAAACCCACCCCACACGCCATGGACCTCAGGGCACTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361756.8
ENST00000525243.5
ENST00000526549.5
ENST00000530137.1
ENST00000533380.5
CDS-3UTR TCA 90 bp TGCCCACGGGCGAGTATCCATGGTGCTGATTCTTCCAGTTGTCCCAAAACAAATGCAGTTGCCCATACATaGCGTGAGGCCTCTCCCAGG +
Preference number: 4 (lower is better)
Translates to: CPRASIHGADSSSCPKTNAVAHT*REASPR
Trigger: CCTGGGAGAGGCCTCACGTCATGTATGGGCAACTGC...ATTTGTTTTGGGACAACTGGAAGAATCAGCACCATGGATACTCGCCCGTGGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
CDS-3UTR TCA 90 bp CACGGATGCAGAACTCGTGGAAGACATGATTGCAGGACAGCCTATACGTGTTCTGCAGTTGCCCATACATaGCGTGAGGCCTCTCCCAGG +
Preference number: 4 (lower is better)
Translates to: HGCRTRGRHDCRTAYTCSAVAHT*REASPR
Trigger: CCTGGGAGAGGCCTCACGTCATGTATGGGCAACTGC...AGAACACGTATAGGCTGTCCTGCAATCATGTCTTCCACGAGTTCTGCATCCGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525243.5
ENST00000526549.5
ENST00000530655.5
CDS-3UTR TCA 90 bp CCAGCAGTGTTCTCGGCCAGAGATGAGAAGGCTCCTTTAAACCAAAAATGTCATCAGCCAGAGGGGTCCTaGGTGGCCCAAGCACCCCTT +
Preference number: 4 (lower is better)
Translates to: PAVFSARDEKAPLNQKCHQPEGS*VAQAPL
Trigger: AAGGGGTGCTTGGGCCACTCAGGACCCCTCTGGCTG...ATGACATTTTTGGTTTAAAGGAGCCTTCTCATCTCTGGCCGAGAACACTGCTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
CDS-3UTR TCA 90 bp CCAGCAGTGTTCTCGGCCAGAGATGAGAAGGCTCCTTTAAACCAAAAATGTCATAGGGAGTGGGTGGGCTaGGGCCTTCAGCTACCTGGG +
Preference number: 4 (lower is better)
Translates to: PAVFSARDEKAPLNQKCHREWVG*GLQLPG
Trigger: CCCAGGTAGCTGAAGGCCTCAGCCCACCCACTCCCT...ATGACATTTTTGGTTTAAAGGAGCCTTCTCATCTCTGGCCGAGAACACTGCTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
CDS-3UTR TCA 90 bp TCATATCCCTCCCCAGTCCGACACAGCCAGAGGGGTCCTGAGTGGCCCAAGCACAAAACAAATCTTCAATaGATTCTGAGGCCCCAAGGC +
Preference number: 4 (lower is better)
Translates to: SYPSPVRHSQRGPEWPKHKTNLQ*ILRPQG
Trigger: GCCTTGGGGCCTCAGAATTCATTGAAGATTTGTTTT...GTGCTTGGGCCACTCAGGACCCCTCTGGCTGTGTCGGACTGGGGAGGGATATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
CDS-3UTR TCA 90 bp TTCTCAATGATCCCCTCTTCACTGACGTCCACAAAGATCTGCTGCCCACACACAACCTCTATTCTTGGCTaGCCACAGCCCTGCCCACGG +
Preference number: 4 (lower is better)
Translates to: FSMIPSSLTSTKICCPHTTSILG*PQPCPR
Trigger: CCGTGGGCAGGGCTGTGGTCAGCCAAGAATAGAGGT...TGTGTGTGGGCAGCAGATCTTTGTGGACGTCAGTGAAGAGGGGATCATTGAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526549.5
CDS-3UTR TCA 90 bp TGGACTACACCAATGATGACAGGCTGCCAGGCTACCAAGTATCGAAGCCAGTCCAGGGGCAGGCCCTACTaGGCCATATTCCCTAGAAAC +
Preference number: 4 (lower is better)
Translates to: WTTPMMTGCQATKYRSQSRGRPY*AIFPRN
Trigger: GTTTCTAGGGAATATGGCTCAGTAGGGCCTGCCCCT...GGACTGGCTTCGATACTTGGTAGCCTGGCAGCCTGTCATCATTGGTGTAGTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393713.7
ENST00000526549.5
CDS-3UTR TCA 90 bp AAGGCTGTGACAGCAGAGAACAAGATCCAGATCACTAGGAACCTCCACCAGTGCGCCTGGGCAACACGGTaGAACCCCACCTATTGTAGG +
Preference number: 4 (lower is better)
Translates to: KAVTAENKIQITRNLHQCAWATR*NPTYCR
Trigger: CCTACAATAGGTGGGGTTTCACCGTGTTGCCCAGGC...GCACTGGTGGAGGTTCCTAGTGATCTGGATCTTGTTCTCTGCTGTCACAGCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393711.7
CDS-3UTR GCA 90 bp AAGGCTGTGACAGCAGAGAACAAGATCCAGATCACTAGGAACCTCCACCAGTGCGCATGCATGCGTGCGTaGTCGACCCTCCATTGCTCT +
Preference number: 4 (lower is better)
Translates to: KAVTAENKIQITRNLHQCACMRA*STLHCS
Trigger: AGAGCAATGGAGGGTCGAGCACGCACGCATGCATGC...GCACTGGTGGAGGTTCCTAGTGATCTGGATCTTGTTCTCTGCTGTCACAGCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393711.7
ENST00000530058.5
CDS-3UTR GCA 90 bp GGTTTTCGGGTGGCTCGGAAGGTAACAAAGGCTGTGACAGCAGAGAACAAGATCCTTGGCATGCATGCGTaGGTGCTCGACCCTCCATTG +
Preference number: 4 (lower is better)
Translates to: GFRVARKVTKAVTAENKILGMHA*VLDPPL
Trigger: CAATGGAGGGTCGAGCACGCACGCATGCATGCCAAG...GATCTTGTTCTCTGCTGTCACAGCCTTTGTTACCTTCCGAGCCACCCGAAAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393711.7
ENST00000530058.5
CDS-3UTR GCA 90 bp GTCTGTACTAGAGGTTTTCGGGTGGCTCGGAAGGTAACAAAGGCTGTGACAGCACTTGGCATGCATGCGTaGGTGCTCGACCCTCCATTG +
Preference number: 4 (lower is better)
Translates to: VCTRGFRVARKVTKAVTALGMHA*VLDPPL
Trigger: CAATGGAGGGTCGAGCACGCACGCATGCATGCCAAG...TGCTGTCACAGCCTTTGTTACCTTCCGAGCCACCCGAAAACCTCTAGTACAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393711.7
ENST00000530058.5
CDS-3UTR GCA 90 bp ACCACTTATAAACCAACCTTGGGGTTGTCTGTACTAGAGGTTTTCGGGTGGCTCGGTGCTTGGCATGCATaGGTGCGTGCTCGACCCTCC +
Preference number: 4 (lower is better)
Translates to: TTYKPTLGLSVLEVFGWLGAWHA*VRARPS
Trigger: GGAGGGTCGAGCACGCACGCATGCATGCCAAGCACC...GAGCCACCCGAAAACCTCTAGTACAGACAACCCCAAGGTTGGTTTATAAGTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393711.7
ENST00000530058.5
CDS-3UTR GCA 90 bp GGGGTTGTCTGTACTAGAGGTTTTCGGGTGGCTCGGAAGGTAACAAAGGCTGTGGGCCACCACCAAGGTTaGGATGAGGATGAGGACCAT +
Preference number: 4 (lower is better)
Translates to: GVVCTRGFRVARKVTKAVGHHQG*DEDEDH
Trigger: ATGGTCCTCATCCTCATCGCAACCTTGGTGGTGGCC...CACAGCCTTTGTTACCTTCCGAGCCACCCGAAAACCTCTAGTACAGACAACCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393711.7
ENST00000526549.5
ENST00000530058.5
CDS-3UTR GCA 90 bp AGTGCCCTGAGGTCCATGGCGTGTGGGGTGGGTTTTCCACTGATGCTCTTCATCTCCACAAAGATCTGCTaGCCACACACAGCACACACA +
Preference number: 4 (lower is better)
Translates to: SALRSMACGVGFPLMLFISTKIC*PHTAHT
Trigger: TGTGTGTGCTGTGTGTGGGCAGCAGATCTTTGTGGA...GATGAAGAGCATCAGTGGAAAACCCACCCCACACGCCATGGACCTCAGGGCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361756.8
ENST00000525243.5
ENST00000526549.5
ENST00000530137.1
ENST00000533380.5
CDS-3UTR GCA 90 bp ACGGGAGTGACAACATCCTGCTTCGTTCTTGCTGCCCTTGAAGGGGCAGGCCCTCGTGGAAGACATGATTaGAGGACAGCCTATACGTGT +
Preference number: 4 (lower is better)
Translates to: TGVTTSCFVLAALEGAGPRGRHD*RTAYTC
Trigger: ACACGTATAGGCTGTCCTGCAATCATGTCTTCCACG...AGGGCCTGCCCCTTCAAGGGCAGCAAGAACGAAGCAGGATGTTGTCACTCCCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361756.8
ENST00000526549.5
ENST00000530137.1
CDS-3UTR GCA 90 bp TGGACTACACCAATGATGACAGGCTGCCAGGCTACCAAGTATCGAAGCCAGTCCGCTTCTTTCCCACGATaGACCAGCCACGGATGCAGA +
Preference number: 4 (lower is better)
Translates to: WTTPMMTGCQATKYRSQSASFPR*TSHGCR
Trigger: TCTGCATCCGTGGCTGGTGCATCGTGGGAAAGAAGC...GGACTGGCTTCGATACTTGGTAGCCTGGCAGCCTGTCATCATTGGTGTAGTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393713.7
ENST00000525243.5
ENST00000526549.5
CDS-3UTR GCA 90 bp GACATGATTGCAGGACAGCCTATACGTGTTCTCAATGATCCCCTCTTCACTGACGCTCTGCCCCCACCCTaGTTAGGCAGGGAGGGTGAA +
Preference number: 4 (lower is better)
Translates to: DMIAGQPIRVLNDPLFTDALPPP*LGREGE
Trigger: TTCACCCTCCCTGCCTAAGCAGGGTGGGGGCAGAGC...GTCAGTGAAGAGGGGATCATTGAGAACACGTATAGGCTGTCCTGCAATCATGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000526549.5
CDS-3UTR GCA 90 bp AAGGCTCCTTTAAACCAAAAATGTCATGGCTCTGCCCCCACCCTGCTTAGGCAGGCCGTCAGTCATGGCTaGCAACAATTGCCCCATGGC +
Preference number: 4 (lower is better)
Translates to: KAPLNQKCHGSAPTLLRQAVSHG*QQLPHG
Trigger: GCCATGGGGCAATTGTTGGCAGCCATGACTGACGGC...CTGCCTAAGCAGGGTGGGGGCAGAGCCATGACATTTTTGGTTTAAAGGAGCCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
CDS-3UTR GCA 90 bp AGAGGTTTTCGGGTGGCTCGGAAGGTAACAAAGGCTGTGACAGCAGAGAACAAGGCCGTCAGTCATGGCTaGCAACAATTGCCCCATGGC +
Preference number: 4 (lower is better)
Translates to: RGFRVARKVTKAVTAENKAVSHG*QQLPHG
Trigger: GCCATGGGGCAATTGTTGGCAGCCATGACTGACGGC...CTTGTTCTCTGCTGTCACAGCCTTTGTTACCTTCCGAGCCACCCGAAAACCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526549.5
CDS-3UTR GCA 90 bp ACAGGCTGCCAGGCTACCAAGTATCGAAGCCAGTCCAGCAGTTGCCCATACATGGGACTGGGAATCCCCTaGCAGCTTCAAGGACATATC +
Preference number: 4 (lower is better)
Translates to: TGCQATKYRSQSSSCPYMGLGIP*QLQGHI
Trigger: GATATGTCCTTGAAGCTGGCAGGGGATTCCCAGTCC...CATGTATGGGCAACTGCTGGACTGGCTTCGATACTTGGTAGCCTGGCAGCCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393713.7
ENST00000526549.5
CDS-3UTR GCA 90 bp CTGAAGGATCCACTGAAGAATGAGCTTGCACAAGGGGCCGTCAGTCATGGCTGCGGACTGGGAATCCCCTaGCAGCTTCAAGGACATATC +
Preference number: 4 (lower is better)
Translates to: LKDPLKNELAQGAVSHGCGLGIP*QLQGHI
Trigger: GATATGTCCTTGAAGCTGGCAGGGGATTCCCAGTCC...GCAGCCATGACTGACGGCCCCTTGTGCAAGCTCATTCTTCAGTGGATCCTTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
CDS-3UTR GCA 90 bp AAGCCAGTCCAGCAGTTGCCCATACATGACGTGAGGCCTCTCCCAGGGATTGCTTCCCTAGAAACCCAATaGCGAAGGCCCATGTTTGAC +
Preference number: 4 (lower is better)
Translates to: KPVQQLPIHDVRPLPGIASLETQ*RRPMFD
Trigger: GTCAAACATGGGCCTTCGGCATTGGGTTTCTAGGGA...AGCAATCCCTGGGAGAGGCCTCACGTCATGTATGGGCAACTGCTGGACTGGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393713.7
ENST00000526549.5
CDS-3UTR GCA 90 bp AAGCCAGTCCAGCAGTTGCCCATACATGACGTGAGGCCTCTCCCAGGGATTGCTGGAGTGACAACATCCTaGTTCGTTCTTGCTGCCCTT +
Preference number: 4 (lower is better)
Translates to: KPVQQLPIHDVRPLPGIAGVTTS*FVLAAL
Trigger: AAGGGCAGCAAGAACGAAGCAGGATGTTGTCACTCC...AGCAATCCCTGGGAGAGGCCTCACGTCATGTATGGGCAACTGCTGGACTGGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393713.7
ENST00000526549.5
CDS-3UTR GCA 90 bp AAGGCTCCTTTAAACCAAAAATGTCATGGCTCTGCCCCCACCCTGCTTAGGCAGCTTGGCATGCATGCGTaGGTGCTCGACCCTCATCCA +
Preference number: 4 (lower is better)
Translates to: KAPLNQKCHGSAPTLLRQLGMHA*VLDPHP
Trigger: TGGATGAGGGTCGAGCACGCACGCATGCATGCCAAG...CTGCCTAAGCAGGGTGGGGGCAGAGCCATGACATTTTTGGTTTAAAGGAGCCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
CDS-3UTR CCA 90 bp ACAAAGGCTGTGACAGCAGAGAACAAGATCCAGATCACTAGGAACCTCCACCAGCATGGCCACGGTGCTTaGCATGCATGCGTGCGTGCT +
Preference number: 4 (lower is better)
Translates to: TKAVTAENKIQITRNLHQHGHGA*HACVRA
Trigger: AGCACGCACGCATGCATGCCAAGCACCGTGGCCATG...CTGGTGGAGGTTCCTAGTGATCTGGATCTTGTTCTCTGCTGTCACAGCCTTTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393711.7
ENST00000526549.5
ENST00000530058.5
CDS-3UTR CCA 90 bp AGCTCATGGAGCTTTATTCAGACGGGAGTGACAACATCCTGCTTCGTTCTTGCTTGCACCAGGAGCAGCTaGGCCACCACCAAGGTTGCG +
Preference number: 4 (lower is better)
Translates to: SSWSFIQTGVTTSCFVLACTRSS*ATTKVA
Trigger: CGCAACCTTGGTGGTGGCCCAGCTGCTCCTGGTGCA...AGCAAGAACGAAGCAGGATGTTGTCACTCCCGTCTGAATAAAGCTCCATGAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
CDS-3UTR CCA 90 bp AAATCTTCAATGAATTCTGAGGCCCCAAGGCTTCCCTTGTTGGCCAAGTCACTGCCCAGGAGGTCTTTGTaGGCAGGGAGGAGAGTGCCC +
Preference number: 4 (lower is better)
Translates to: KSSMNSEAPRLPLLAKSLPRRSL*AGRRVP
Trigger: GGGCACTCTCCTCCCTGCCCACAAAGACCTCCTGGG...CAGTGACTTGGCCAACAAGGGAAGCCTTGGGGCCTCAGAATTCATTGAAGATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
CDS-3UTR CCA 90 bp AAGAATGAGCTTGCACAAGGGGCCGTCAGTCATGGCTGCCAACAATTGCCCCATCTCAGTGCTCACCCGTaGCACAAGCCTGAGTACGTT +
Preference number: 4 (lower is better)
Translates to: KNELAQGAVSHGCQQLPHLSAHP*HKPEYV
Trigger: AACGTACTCAGGCTTGTGCCACGGGTGAGCACTGAG...ATGGGGCAATTGTTGGCAGCCATGACTGACGGCCCCTTGTGCAAGCTCATTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
CDS-3UTR CCA 90 bp AAGAATGAGCTTGCACAAGGGGCCGTCAGTCATGGCTGCCAACAATTGCCCCATCCAGCCTATAGCTCTTaGACAGGGGGAGACAGAGTC +
Preference number: 4 (lower is better)
Translates to: KNELAQGAVSHGCQQLPHPAYSS*TGGDRV
Trigger: GACTCTGTCTCCCCCTGTCCAAGAGCTATAGGCTGG...ATGGGGCAATTGTTGGCAGCCATGACTGACGGCCCCTTGTGCAAGCTCATTCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
CDS-3UTR CCA 90 bp GAGAGTGCCCTGAGGTCCATGGCGTGTGGGGTGGGTTTTCCACTGATGCTCTTCCCAACAATTGCCCCATaGCCCAACTATATGACCTCT +
Preference number: 4 (lower is better)
Translates to: ESALRSMACGVGFPLMLFPTIAP*PNYMTS
Trigger: AGAGGTCATATAGTTGGGCCATGGGGCAATTGTTGG...GAAGAGCATCAGTGGAAAACCCACCCCACACGCCATGGACCTCAGGGCACTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
CDS-3UTR CCA 90 bp CACAAGCCTGAGTACGTTAGCTCTTCTATACTAAGTGCACCAGGCTTGAGCCCCAGGGGCCGTCAGTCATaGCTGCCAACAATTGCCCCA +
Preference number: 4 (lower is better)
Translates to: HKPEYVSSSILSAPGLSPRGRQS*LPTIAP
Trigger: TGGGGCAATTGTTGGCAGCCATGACTGACGGCCCCT...GGGGCTCAAGCCTGGTGCACTTAGTATAGAAGAGCTAACGTACTCAGGCTTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
CDS-3UTR CCA 90 bp GATGACAGGCTGCCAGGCTACCAAGTATCGAAGCCAGTCCAGCAGTTGCCCATAATCATTGTAGGAGCGTaGGTGCCTCTGCTTCCACTG +
Preference number: 4 (lower is better)
Translates to: DDRLPGYQVSKPVQQLPIIIVGA*VPLLPL
Trigger: CAGTGGAAGCAGAGGCACCCACGCTCCTACAATGAT...TATGGGCAACTGCTGGACTGGCTTCGATACTTGGTAGCCTGGCAGCCTGTCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525243.5
CDS-3UTR TCA 90 bp CGACACAGCCAGAGGGGTCCTGAGTGGCCCAAGCACCCCTTTGAGTCTTTCCCATGCCAGTGGCATAGCTaGTTTTATAGATTAGCAGGA +
Preference number: 4 (lower is better)
Translates to: RHSQRGPEWPKHPFESFPCQWHS*FYRLAG
Trigger: TCCTGCTAATCTATAAAATCAGCTATGCCACTGGCA...TGGGAAAGACTCAAAGGGGTGCTTGGGCCACTCAGGACCCCTCTGGCTGTGTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
CDS-3UTR TCA 90 bp GGCGTGTGGGGTGGGTTTTCCACTGATGCTCTTCATCACTATTCCAGGCCCAGGAACTCGTGGAAGACATaGTTGCAGGACAGCCTATAC +
Preference number: 4 (lower is better)
Translates to: GVWGGFSTDALHHYSRPRNSWKT*LQDSLY
Trigger: GTATAGGCTGTCCTGCAATCATGTCTTCCACGAGTT...CCTGGGCCTGGAATAGTGATGAAGAGCATCAGTGGAAAACCCACCCCACACGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525243.5
ENST00000526549.5
CDS-3UTR TCA 90 bp TCATATTCTTCTGCCTCACGTACACACACACACACACACACACACGCATACGCAGCCCAAGCACCCCTTTaGGTCTTTCCCACCCAGGAG +
Preference number: 4 (lower is better)
Translates to: SYSSASRTHTHTHTHAYAAQAPL*VFPTQE
Trigger: CTCCTGGGTGGGAAAGACTCAAAGGGGTGCTTGGGC...TGCGTATGCGTGTGTGTGTGTGTGTGTGTGTGTACGTGAGGCAGAAGAATATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
CDS-3UTR TCA 90 bp AAGGCTCCTTTAAACCAAAAATGTCATGGCTCTGCCCCCACCCTGCTTAGGCAGGGATCCACTGAAGAATaGGCTTGCACAAGGGGCCGT +
Preference number: 4 (lower is better)
Translates to: KAPLNQKCHGSAPTLLRQGSTEE*ACTRGR
Trigger: ACGGCCCCTTGTGCAAGCTCATTCTTCAGTGGATCC...CTGCCTAAGCAGGGTGGGGGCAGAGCCATGACATTTTTGGTTTAAAGGAGCCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
CDS-3UTR TCA 90 bp GGCGTGTGGGGTGGGTTTTCCACTGATGCTCTTCATCACTATTCCAGGCCCAGGCAAGGACATATCATCTaGCACAGGGAGAAGCTGACA +
Preference number: 4 (lower is better)
Translates to: GVWGGFSTDALHHYSRPRQGHII*HREKLT
Trigger: TGTCAGCTTCTCCCTGTGTCAGATGATATGTCCTTG...CCTGGGCCTGGAATAGTGATGAAGAGCATCAGTGGAAAACCCACCCCACACGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393713.7
ENST00000526549.5
CDS-3UTR TCA 90 bp GTGACAACATCCTGCTTCGTTCTTGCTGCCCTTGAAGGGGCAGGCCCTACTGAGTTATTCAGACGGGAGTaGCAACATCCTGCTTCGTTC +
Preference number: 4 (lower is better)
Translates to: VTTSCFVLAALEGAGPTELFRRE*QHPASF
Trigger: GAACGAAGCAGGATGTTGTCACTCCCGTCTGAATAA...CTCAGTAGGGCCTGCCCCTTCAAGGGCAGCAAGAACGAAGCAGGATGTTGTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
CDS-3UTR GCA 90 bp TATAAACCAACCTTGGGGTTGTCTGTACTAGAGGTTTTCGGGTGGCTCGGAAGGGCATGCATGCGTGCGTaGTCGACCCTCCATTGCTCT +
Preference number: 4 (lower is better)
Translates to: YKPTLGLSVLEVFGWLGRACMRA*STLHCS
Trigger: AGAGCAATGGAGGGTCGAGCACGCACGCATGCATGC...CCTTCCGAGCCACCCGAAAACCTCTAGTACAGACAACCCCAAGGTTGGTTTATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393711.7
ENST00000530058.5
CDS-3UTR GCA 90 bp CAGTTGTCCCAAAACAAATCTTCAATGAATTCTGAGGCCCCAAGGCTTCCCTTGCCACGGTGCTTGGCATaGATGCGTGCGTGCTCGACC +
Preference number: 4 (lower is better)
Translates to: QLSQNKSSMNSEAPRLPLPRCLA*MRACST
Trigger: GGTCGAGCACGCACGCATGCATGCCAAGCACCGTGG...CAAGGGAAGCCTTGGGGCCTCAGAATTCATTGAAGATTTGTTTTGGGACAACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
CDS-3UTR GCA 90 bp CGGAAGGTAACAAAGGCTGTGACAGCAGAGAACAAGATCCAGATCACTAGGAACGCTTCATGGCCACGGTaGTTGGCATGCATGCGTGCG +
Preference number: 4 (lower is better)
Translates to: RKVTKAVTAENKIQITRNASWPR*LACMRA
Trigger: CGCACGCATGCATGCCAAGCACCGTGGCCATGAAGC...GTTCCTAGTGATCTGGATCTTGTTCTCTGCTGTCACAGCCTTTGTTACCTTCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393711.7
ENST00000526549.5
ENST00000530058.5
CDS-3UTR GCA 90 bp TTCTCGGCCAGAGATGAGAAGGCTCCTTTAAACCAAAAATGTCATGGCTCTGCCGCTTCATGGCCACGGTaGTTGGCATGCATGCGTGCG +
Preference number: 4 (lower is better)
Translates to: FSARDEKAPLNQKCHGSAASWPR*LACMRA
Trigger: CGCACGCATGCATGCCAAGCACCGTGGCCATGAAGC...GGCAGAGCCATGACATTTTTGGTTTAAAGGAGCCTTCTCATCTCTGGCCGAGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
CDS-3UTR GCA 90 bp ACAGGCTGCCAGGCTACCAAGTATCGAAGCCAGTCCAGCAGTTGCCCATACATGAGGACCATTTCAGCATaGATAGCTTCATGGCCACGG +
Preference number: 4 (lower is better)
Translates to: TGCQATKYRSQSSSCPYMRTISA*IASWPR
Trigger: CCGTGGCCATGAAGCTATGCATGCTGAAATGGTCCT...CATGTATGGGCAACTGCTGGACTGGCTTCGATACTTGGTAGCCTGGCAGCCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393713.7
ENST00000525243.5
ENST00000526549.5
ENST00000530655.5
CDS-3UTR GCA 90 bp GCAGAGAACAAGATCCAGATCACTAGGAACCTCCACCAGTGCAGCTTCACTGTGGGCCACCACCAAGGTTaGGATGAGGATGAGGACCAT +
Preference number: 4 (lower is better)
Translates to: AENKIQITRNLHQCSFTVGHHQG*DEDEDH
Trigger: ATGGTCCTCATCCTCATCGCAACCTTGGTGGTGGCC...CACAGTGAAGCTGCACTGGTGGAGGTTCCTAGTGATCTGGATCTTGTTCTCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393711.7
ENST00000526549.5
CDS-3UTR GCA 90 bp GGAGAGTGCCCTGAGGTCCATGGCGTGTGGGGTGGGTTTTCCACTGATGCTCTTGAACCCTATGGTAGATaGCATGTAGTCTGCACACAT +
Preference number: 4 (lower is better)
Translates to: GECPEVHGVWGGFSTDALEPYGR*HVVCTH
Trigger: ATGTGTGCAGACTACATGGCATCTACCATAGGGTTC...AAGAGCATCAGTGGAAAACCCACCCCACACGCCATGGACCTCAGGGCACTCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000525243.5
ENST00000526549.5
ENST00000530137.1
CDS-3UTR GCA 90 bp ATGATGACAGGCTGCCAGGCTACCAAGTATCGAAGCCAGTCCAGCAGTTGCCCATCCACAAAGATCTGCTaGCCACACACAGCACACACA +
Preference number: 4 (lower is better)
Translates to: MMTGCQATKYRSQSSSCPSTKIC*PHTAHT
Trigger: TGTGTGTGCTGTGTGTGGGCAGCAGATCTTTGTGGA...TGGGCAACTGCTGGACTGGCTTCGATACTTGGTAGCCTGGCAGCCTGTCATCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525243.5
ENST00000526549.5
ENST00000530655.5
CDS-3UTR GCA 90 bp AAGCCAGTCCAGCAGTTGCCCATACATGACGTGAGGCCTCTCCCAGGGATTGCTCGTGGAAGACATGATTaGAGGACAGCCTATACGTGT +
Preference number: 4 (lower is better)
Translates to: KPVQQLPIHDVRPLPGIARGRHD*RTAYTC
Trigger: ACACGTATAGGCTGTCCTGCAATCATGTCTTCCACG...AGCAATCCCTGGGAGAGGCCTCACGTCATGTATGGGCAACTGCTGGACTGGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525243.5
ENST00000526549.5
ENST00000530655.5
CDS-3UTR GCA 90 bp TTTGCAGTAGGGACACGTTTGCTTCTTTCCCACGATGCACCAGCCACGGATGCATGCACCAGCCACGGATaGAGAACTCGTGGAAGACAT +
Preference number: 4 (lower is better)
Translates to: FAVGTRLLLSHDAPATDACTSHG*RTRGRH
Trigger: ATGTCTTCCACGAGTTCTGCATCCGTGGCTGGTGCA...TGCATCCGTGGCTGGTGCATCGTGGGAAAGAAGCAAACGTGTCCCTACTGCAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525243.5
ENST00000526549.5
ENST00000530655.5
CDS-3UTR GCA 90 bp GAGTGCCCTGAGGTCCATGGCGTGTGGGGTGGGTTTTCCACTGATGCTCTTCATGGTCTACCTTCTCTTTaGAGTAGGGACACGTTTGCT +
Preference number: 4 (lower is better)
Translates to: ECPEVHGVWGGFSTDALHGLPSL*SRDTFA
Trigger: AGCAAACGTGTCCCTACTGCAAAGAGAAGGTAGACC...ATGAAGAGCATCAGTGGAAAACCCACCCCACACGCCATGGACCTCAGGGCACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000525243.5
ENST00000526549.5
ENST00000530137.1
ENST00000533380.5
CDS-3UTR GCA 90 bp GGGGTCCTGAGTGGCCCAAGCACCCCTTTGAGTCTTTCCCACCCAGGAGGTCTTTCTGTCATATTCTTCTaGCTCACGTACACACACACA +
Preference number: 4 (lower is better)
Translates to: GVLSGPSTPLSLSHPGGLSVIFF*LTYTHT
Trigger: TGTGTGTGTGTACGTGAGGCAGAAGAATATGACAGA...AAGACCTCCTGGGTGGGAAAGACTCAAAGGGGTGCTTGGGCCACTCAGGACCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
CDS-3UTR GCA 90 bp GACAGGCTGCCAGGCTACCAAGTATCGAAGCCAGTCCAGCAGTTGCCCATACATGGAGTGACAACATCCTaGTTCGTTCTTGCTGCCCTT +
Preference number: 4 (lower is better)
Translates to: DRLPGYQVSKPVQQLPIHGVTTS*FVLAAL
Trigger: AAGGGCAGCAAGAACGAAGCAGGATGTTGTCACTCC...ATGTATGGGCAACTGCTGGACTGGCTTCGATACTTGGTAGCCTGGCAGCCTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393713.7
ENST00000526549.5
CDS-3UTR GCA 90 bp CATATTCTTCTGCCTCACGTACACACACACACACACACACACACGCATACGCACCTTGGCATGCATGCGTaGGTGCTCGACCCTCATCCA +
Preference number: 4 (lower is better)
Translates to: HILLPHVHTHTHTHTHTHLGMHA*VLDPHP
Trigger: TGGATGAGGGTCGAGCACGCACGCATGCATGCCAAG...GTGCGTATGCGTGTGTGTGTGTGTGTGTGTGTGTACGTGAGGCAGAAGAATATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
CDS-3UTR GCA 90 bp TTCTCGGCCAGAGATGAGAAGGCTCCTTTAAACCAAAAATGTCATGGCTCTGCCGGTGCTTGGCATGCATaGGTGCGTGCTCGACCCTCA +
Preference number: 4 (lower is better)
Translates to: FSARDEKAPLNQKCHGSAGAWHA*VRARPS
Trigger: TGAGGGTCGAGCACGCACGCATGCATGCCAAGCACC...GGCAGAGCCATGACATTTTTGGTTTAAAGGAGCCTTCTCATCTCTGGCCGAGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
CDS-3UTR GCA 90 bp ATGATTGCAGGACAGCCTATACGTGTTCTCAATGATCCCCTCTTCACTGACGTCGGTGCTTGGCATGCATaGGTGCGTGCTCGACCCTCA +
Preference number: 4 (lower is better)
Translates to: MIAGQPIRVLNDPLFTDVGAWHA*VRARPS
Trigger: TGAGGGTCGAGCACGCACGCATGCATGCCAAGCACC...GACGTCAGTGAAGAGGGGATCATTGAGAACACGTATAGGCTGTCCTGCAATCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526549.5
ENST00000530655.5
CDS-3UTR CCA 90 bp CCAGCAGTGTTCTCGGCCAGAGATGAGAAGGCTCCTTTAAACCAAAAATGTCATCCCAGGAGGTCTTTGTaGGCAGGGAGGAGAGTGCCC +
Preference number: 4 (lower is better)
Translates to: PAVFSARDEKAPLNQKCHPRRSL*AGRRVP
Trigger: GGGCACTCTCCTCCCTGCCCACAAAGACCTCCTGGG...ATGACATTTTTGGTTTAAAGGAGCCTTCTCATCTCTGGCCGAGAACACTGCTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
CDS-3UTR CCA 90 bp GCCAACAATTGCCCCATGGCCCAACTATATGACCTCTATTCTTGGCTGACCACAAGGCCTTCAGCTACCTaGGAGCCCAGCAGTGTTCTC +
Preference number: 4 (lower is better)
Translates to: ANNCPMAQLYDLYSWLTTRPSAT*EPSSVL
Trigger: GAGAACACTGCTGGGCTCCCAGGTAGCTGAAGGCCT...TGTGGTCAGCCAAGAATAGAGGTCATATAGTTGGGCCATGGGGCAATTGTTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
CDS-3UTR CCA 90 bp ATGCCTTGGACTACACCAATGATGACAGGCTGCCAGGCTACCAAGTATCGAAGCCTCAGTGCTCACCCGTaGCACAAGCCTGAGTACGTT +
Preference number: 4 (lower is better)
Translates to: MPWTTPMMTGCQATKYRSLSAHP*HKPEYV
Trigger: AACGTACTCAGGCTTGTGCCACGGGTGAGCACTGAG...GCTTCGATACTTGGTAGCCTGGCAGCCTGTCATCATTGGTGTAGTCCAAGGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393713.7
ENST00000526549.5
CDS-3UTR CCA 90 bp CACAAGCCTGAGTACGTTAGCTCTTCTATACTAAGTGCACCAGGCTTGAGCCCCGGATATTCCCTGGACTaGGAATCCCCTGCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: HKPEYVSSSILSAPGLSPGYSLD*ESPASF
Trigger: GAAGCTGGCAGGGGATTCCCAGTCCAGGGAATATCC...GGGGCTCAAGCCTGGTGCACTTAGTATAGAAGAGCTAACGTACTCAGGCTTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
CDS-3UTR CCA 90 bp TGTACTAGAGGTTTTCGGGTGGCTCGGAAGGTAACAAAGGCTGTGACAGCAGAGCCTATTGTAGGAGCGTaGGTGCCTCTGCTTCCACTG +
Preference number: 4 (lower is better)
Translates to: CTRGFRVARKVTKAVTAEPIVGA*VPLLPL
Trigger: CAGTGGAAGCAGAGGCACCCACGCTCCTACAATAGG...CTCTGCTGTCACAGCCTTTGTTACCTTCCGAGCCACCCGAAAACCTCTAGTACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393711.7
3UTR CAA 72 bp CTTCCCTTGTTGGCCAAGTCACTGATAAGGTTCCACTaGCCTCAACCAGCCTATAGCTCTTGGACAGGGGGA +
Preference number: 4 (lower is better)
Translates to: LPLLAKSLIRFH*PQPAYSSWTGG
Trigger: TCCCCCTGTCCAAGAGCTATAGGCTGGTTGAGGCAAGTGGAACCTTATCAGTGACTTGGCCAACAAGGGAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
CDS-3UTR TCA 90 bp AGGCCCATGTTTGACCTCCCACTTTATTCAAGTCGCCTAGGACTAGGGCTGGGGGGAACAACCCACATCTaGAAGAGGGTCACCATATTG +
Preference number: 4 (lower is better)
Translates to: RPMFDLPLYSSRLGLGLGGTTHI*KRVTIL
Trigger: CAATATGGTGACCCTCTTTCAGATGTGGGTTGTTCC...CCCCAGCCCTAGTCCTAGGCGACTTGAATAAAGTGGGAGGTCAAACATGGGCCT
52% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000530137.1
CDS-3UTR TCA 90 bp GAGTGCCCTGAGGTCCATGGCGTGTGGGGTGGGTTTTCCACTGATGCTCTTCATAGCACACACACTGTCTaGAAGATGTTTGGTAGGCAT +
Preference number: 4 (lower is better)
Translates to: ECPEVHGVWGGFSTDALHSTHTV*KMFGRH
Trigger: ATGCCTACCAAACATCTTTCAGACAGTGTGTGTGCT...ATGAAGAGCATCAGTGGAAAACCCACCCCACACGCCATGGACCTCAGGGCACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361756.8
ENST00000525243.5
ENST00000526549.5
ENST00000530137.1
ENST00000533380.5
CDS-3UTR TCA 90 bp CTGAGGTCCATGGCGTGTGGGGTGGGTTTTCCACTGATGCTCTTCATCACTATTGGCCCAGGATGTAGTTaGTGCCTTGGACTACACCAA +
Preference number: 4 (lower is better)
Translates to: LRSMACGVGFPLMLFITIGPGCS*CLGLHQ
Trigger: TTGGTGTAGTCCAAGGCATCAACTACATCCTGGGCC...AATAGTGATGAAGAGCATCAGTGGAAAACCCACCCCACACGCCATGGACCTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393713.7
ENST00000525243.5
ENST00000526549.5
CDS-3UTR TCA 90 bp CCTTGGACTACACCAATGATGACAGGCTGCCAGGCTACCAAGTATCGAAGCCAGCTTTCAAGAAGGAAGTaGTGTGGCAGAGTGACCGCT +
Preference number: 4 (lower is better)
Translates to: PWTTPMMTGCQATKYRSQLSRRK*CGRVTA
Trigger: AGCGGTCACTCTGCCACATCACTTCCTTCTTGAAAG...CTGGCTTCGATACTTGGTAGCCTGGCAGCCTGTCATCATTGGTGTAGTCCAAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393713.7
ENST00000526549.5
CDS-3UTR TCA 90 bp AAGAATGAGCTTGCACAAGGGGCCGTCAGTCATGGCTGCCAACAATTGCCCCATCTTTCAAGAAGGAAGTaGTGTGGCAGAGTGACCGCT +
Preference number: 4 (lower is better)
Translates to: KNELAQGAVSHGCQQLPHLSRRK*CGRVTA
Trigger: AGCGGTCACTCTGCCACATCACTTCCTTCTTGAAAG...ATGGGGCAATTGTTGGCAGCCATGACTGACGGCCCCTTGTGCAAGCTCATTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
CDS-3UTR TCA 90 bp GAGTGCCCTGAGGTCCATGGCGTGTGGGGTGGGTTTTCCACTGATGCTCTTCATGGGAGGACCCATGAATaGCAAAAATCATGTAGGGAT +
Preference number: 4 (lower is better)
Translates to: ECPEVHGVWGGFSTDALHGRTHE*QKSCRD
Trigger: ATCCCTACATGATTTTTGTCATTCATGGGTCCTCCC...ATGAAGAGCATCAGTGGAAAACCCACCCCACACGCCATGGACCTCAGGGCACTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
CDS-3UTR GCA 90 bp GCTGTGACAGCAGAGAACAAGATCCAGATCACTAGGAACCTCCACCAGTGCAGCAGGACCATTTCAGCATaGATAGCTTCATGGCCACGG +
Preference number: 4 (lower is better)
Translates to: AVTAENKIQITRNLHQCSRTISA*IASWPR
Trigger: CCGTGGCCATGAAGCTATGCATGCTGAAATGGTCCT...GCTGCACTGGTGGAGGTTCCTAGTGATCTGGATCTTGTTCTCTGCTGTCACAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393711.7
ENST00000526549.5
ENST00000530058.5
CDS-3UTR GCA 90 bp GTGACAACATCCTGCTTCGTTCTTGCTGCCCTTGAAGGGGCAGGCCCTACTGAGAGAAGAGAAGGGAGATaGCAAAGTCCATGGCATCTT +
Preference number: 4 (lower is better)
Translates to: VTTSCFVLAALEGAGPTERREGR*QSPWHL
Trigger: AAGATGCCATGGACTTTGGCATCTCCCTTCTCTTCT...CTCAGTAGGGCCTGCCCCTTCAAGGGCAGCAAGAACGAAGCAGGATGTTGTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
CDS-3UTR GCA 90 bp GGCGTGTGGGGTGGGTTTTCCACTGATGCTCTTCATCACTATTCCAGGCCCAGGAGAAGAGAAGGGAGATaGCAAAGTCCATGGCATCTT +
Preference number: 4 (lower is better)
Translates to: GVWGGFSTDALHHYSRPRRREGR*QSPWHL
Trigger: AAGATGCCATGGACTTTGGCATCTCCCTTCTCTTCT...CCTGGGCCTGGAATAGTGATGAAGAGCATCAGTGGAAAACCCACCCCACACGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393713.7
ENST00000525243.5
ENST00000526549.5
CDS-3UTR GCA 90 bp AAGAATGAGCTTGCACAAGGGGCCGTCAGTCATGGCTGCCAACAATTGCCCCATTCCACAAAGATCTGCTaGCCACACACAGCACACACA +
Preference number: 4 (lower is better)
Translates to: KNELAQGAVSHGCQQLPHSTKIC*PHTAHT
Trigger: TGTGTGTGCTGTGTGTGGGCAGCAGATCTTTGTGGA...ATGGGGCAATTGTTGGCAGCCATGACTGACGGCCCCTTGTGCAAGCTCATTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361756.8
ENST00000526549.5
ENST00000530137.1
CDS-3UTR GCA 90 bp GACAGGCTGCCAGGCTACCAAGTATCGAAGCCAGTCCAGCAGTTGCCCATACATCGTGGAAGACATGATTaGAGGACAGCCTATACGTGT +
Preference number: 4 (lower is better)
Translates to: DRLPGYQVSKPVQQLPIHRGRHD*RTAYTC
Trigger: ACACGTATAGGCTGTCCTGCAATCATGTCTTCCACG...ATGTATGGGCAACTGCTGGACTGGCTTCGATACTTGGTAGCCTGGCAGCCTGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525243.5
ENST00000526549.5
ENST00000530655.5
CDS-3UTR GCA 90 bp ACAGGCTGCCAGGCTACCAAGTATCGAAGCCAGTCCAGCAGTTGCCCATACATGCGTGGAAGACATGATTaGAGGACAGCCTATACGTGT +
Preference number: 4 (lower is better)
Translates to: TGCQATKYRSQSSSCPYMRGRHD*RTAYTC
Trigger: ACACGTATAGGCTGTCCTGCAATCATGTCTTCCACG...CATGTATGGGCAACTGCTGGACTGGCTTCGATACTTGGTAGCCTGGCAGCCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525243.5
ENST00000526549.5
ENST00000530655.5
CDS-3UTR GCA 90 bp CTGAGGTCCATGGCGTGTGGGGTGGGTTTTCCACTGATGCTCTTCATCACTATTTGCACCAGCCACGGATaGAGAACTCGTGGAAGACAT +
Preference number: 4 (lower is better)
Translates to: LRSMACGVGFPLMLFITICTSHG*RTRGRH
Trigger: ATGTCTTCCACGAGTTCTGCATCCGTGGCTGGTGCA...AATAGTGATGAAGAGCATCAGTGGAAAACCCACCCCACACGCCATGGACCTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525243.5
ENST00000526549.5
CDS-3UTR GCA 90 bp AAGGCTCCTTTAAACCAAAAATGTCATGGCTCTGCCCCCACCCTGCTTAGGCAGTGCACCAGCCACGGATaGAGAACTCGTGGAAGACAT +
Preference number: 4 (lower is better)
Translates to: KAPLNQKCHGSAPTLLRQCTSHG*RTRGRH
Trigger: ATGTCTTCCACGAGTTCTGCATCCGTGGCTGGTGCA...CTGCCTAAGCAGGGTGGGGGCAGAGCCATGACATTTTTGGTTTAAAGGAGCCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000361756.8
ENST00000526549.5
ENST00000530137.1
CDS-3UTR GCA 90 bp CTCGTGGAAGACATGATTGCAGGACAGCCTATACGTGTTCTCAATGATCCCCTCGCTTCTTTCCCACGATaGACCAGCCACGGATGCAGA +
Preference number: 4 (lower is better)
Translates to: LVEDMIAGQPIRVLNDPLASFPR*TSHGCR
Trigger: TCTGCATCCGTGGCTGGTGCATCGTGGGAAAGAAGC...GAGGGGATCATTGAGAACACGTATAGGCTGTCCTGCAATCATGTCTTCCACGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525243.5
ENST00000526549.5
ENST00000530655.5
CDS-3UTR GCA 90 bp ACAGGCTGCCAGGCTACCAAGTATCGAAGCCAGTCCAGCAGTTGCCCATACATGGGTCTACCTTCTCTTTaGAGTAGGGACACGTTTGCT +
Preference number: 4 (lower is better)
Translates to: TGCQATKYRSQSSSCPYMGLPSL*SRDTFA
Trigger: AGCAAACGTGTCCCTACTGCAAAGAGAAGGTAGACC...CATGTATGGGCAACTGCTGGACTGGCTTCGATACTTGGTAGCCTGGCAGCCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393713.7
ENST00000525243.5
ENST00000526549.5
ENST00000530655.5
CDS-3UTR GCA 90 bp AGGCCCATGTTTGACCTCCCACTTTATTCAAGTCGCCTAGGACTAGGGCTGGGGGGTCTACCTTCTCTTTaGAGTAGGGACACGTTTGCT +
Preference number: 4 (lower is better)
Translates to: RPMFDLPLYSSRLGLGLGGLPSL*SRDTFA
Trigger: AGCAAACGTGTCCCTACTGCAAAGAGAAGGTAGACC...CCCCAGCCCTAGTCCTAGGCGACTTGAATAAAGTGGGAGGTCAAACATGGGCCT
52% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
CDS-3UTR GCA 90 bp AAGAATGAGCTTGCACAAGGGGCCGTCAGTCATGGCTGCCAACAATTGCCCCATCCAATGATGACAGGCTaGCAGGCTACCAAGTATCGA +
Preference number: 4 (lower is better)
Translates to: KNELAQGAVSHGCQQLPHPMMTG*QATKYR
Trigger: TCGATACTTGGTAGCCTGGCAGCCTGTCATCATTGG...ATGGGGCAATTGTTGGCAGCCATGACTGACGGCCCCTTGTGCAAGCTCATTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
CDS-3UTR GCA 90 bp ACAGGCTGCCAGGCTACCAAGTATCGAAGCCAGTCCAGCAGTTGCCCATACATGATGGCTGCCAACAATTaGCCCATGGCCCAACTATAT +
Preference number: 4 (lower is better)
Translates to: TGCQATKYRSQSSSCPYMMAANN*PMAQLY
Trigger: ATATAGTTGGGCCATGGGGCAATTGTTGGCAGCCAT...CATGTATGGGCAACTGCTGGACTGGCTTCGATACTTGGTAGCCTGGCAGCCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393713.7
ENST00000526549.5
CDS-3UTR GCA 90 bp ACGGGAGTGACAACATCCTGCTTCGTTCTTGCTGCCCTTGAAGGGGCAGGCCCTTCTGTCATATTCTTCTaGCTCACGTACACACACACA +
Preference number: 4 (lower is better)
Translates to: TGVTTSCFVLAALEGAGPSVIFF*LTYTHT
Trigger: TGTGTGTGTGTACGTGAGGCAGAAGAATATGACAGA...AGGGCCTGCCCCTTCAAGGGCAGCAAGAACGAAGCAGGATGTTGTCACTCCCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
CDS-3UTR GCA 90 bp AAGGCTCCTTTAAACCAAAAATGTCATGGCTCTGCCCCCACCCTGCTTAGGCAGGGACTGGGAATCCCCTaGCAGCTTCAAGGACATATC +
Preference number: 4 (lower is better)
Translates to: KAPLNQKCHGSAPTLLRQGLGIP*QLQGHI
Trigger: GATATGTCCTTGAAGCTGGCAGGGGATTCCCAGTCC...CTGCCTAAGCAGGGTGGGGGCAGAGCCATGACATTTTTGGTTTAAAGGAGCCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
CDS-3UTR GCA 90 bp CGGGCGAGTATCCATGGTGCTGATTCTTCCAGTTGTCCCAAAACAAATCTTCAAGGTGCTTGGCATGCATaGGTGCGTGCTCGACCCTCA +
Preference number: 4 (lower is better)
Translates to: RASIHGADSSSCPKTNLQGAWHA*VRARPS
Trigger: TGAGGGTCGAGCACGCACGCATGCATGCCAAGCACC...TTGAAGATTTGTTTTGGGACAACTGGAAGAATCAGCACCATGGATACTCGCCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
CDS-3UTR CCA 90 bp GTAGTTGATGCCTTGGACTACACCAATGATGACAGGCTGCCAGGCTACCAAGTAGCATGCATAGCTTCATaGCCACGGTGCTTGGCATGC +
Preference number: 4 (lower is better)
Translates to: VVDALDYTNDDRLPGYQVACIAS*PRCLAC
Trigger: GCATGCCAAGCACCGTGGCCATGAAGCTATGCATGC...TACTTGGTAGCCTGGCAGCCTGTCATCATTGGTGTAGTCCAAGGCATCAACTAC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393713.7
ENST00000525243.5
ENST00000526549.5
CDS-3UTR CCA 90 bp GTGGCTCGGAAGGTAACAAAGGCTGTGACAGCAGAGAACAAGATCCAGATCACTGCATGCATAGCTTCATaGCCACGGTGCTTGGCATGC +
Preference number: 4 (lower is better)
Translates to: VARKVTKAVTAENKIQITACIAS*PRCLAC
Trigger: GCATGCCAAGCACCGTGGCCATGAAGCTATGCATGC...AGTGATCTGGATCTTGTTCTCTGCTGTCACAGCCTTTGTTACCTTCCGAGCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393711.7
ENST00000526549.5
ENST00000530058.5
CDS-3UTR CCA 90 bp CTCGTGGAAGACATGATTGCAGGACAGCCTATACGTGTTCTCAATGATCCCCTCGCATGCATAGCTTCATaGCCACGGTGCTTGGCATGC +
Preference number: 4 (lower is better)
Translates to: LVEDMIAGQPIRVLNDPLACIAS*PRCLAC
Trigger: GCATGCCAAGCACCGTGGCCATGAAGCTATGCATGC...GAGGGGATCATTGAGAACACGTATAGGCTGTCCTGCAATCATGTCTTCCACGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525243.5
ENST00000526549.5
ENST00000530655.5
CDS-3UTR CCA 90 bp CTGAGGTCCATGGCGTGTGGGGTGGGTTTTCCACTGATGCTCTTCATCACTATTCATATTGTAGGAGCGTaGGTGCCTCTGCTTCCACTG +
Preference number: 4 (lower is better)
Translates to: LRSMACGVGFPLMLFITIHIVGA*VPLLPL
Trigger: CAGTGGAAGCAGAGGCACCCACGCTCCTACAATATG...AATAGTGATGAAGAGCATCAGTGGAAAACCCACCCCACACGCCATGGACCTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393713.7
CDS-3UTR CCA 90 bp CACAAGCCTGAGTACGTTAGCTCTTCTATACTAAGTGCACCAGGCTTGAGCCCCCATATTGTAGGAGCGTaGGTGCCTCTGCTTCCACTG +
Preference number: 4 (lower is better)
Translates to: HKPEYVSSSILSAPGLSPHIVGA*VPLLPL
Trigger: CAGTGGAAGCAGAGGCACCCACGCTCCTACAATATG...GGGGCTCAAGCCTGGTGCACTTAGTATAGAAGAGCTAACGTACTCAGGCTTGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000530137.1
CDS-3UTR CCA 90 bp TATAAACCAACCTTGGGGTTGTCTGTACTAGAGGTTTTCGGGTGGCTCGGAAGGCTCAGTGCTCACCCGTaGCACAAGCCTGAGTACGTT +
Preference number: 4 (lower is better)
Translates to: YKPTLGLSVLEVFGWLGRLSAHP*HKPEYV
Trigger: AACGTACTCAGGCTTGTGCCACGGGTGAGCACTGAG...CCTTCCGAGCCACCCGAAAACCTCTAGTACAGACAACCCCAAGGTTGGTTTATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526549.5
CDS-3UTR CCA 90 bp CACAAGCCTGAGTACGTTAGCTCTTCTATACTAAGTGCACCAGGCTTGAGCCCCTGTAGGGATATTCCCTaGACTGGGAATCCCCTGCCA +
Preference number: 4 (lower is better)
Translates to: HKPEYVSSSILSAPGLSPCRDIP*TGNPLP
Trigger: TGGCAGGGGATTCCCAGTCCAGGGAATATCCCTACA...GGGGCTCAAGCCTGGTGCACTTAGTATAGAAGAGCTAACGTACTCAGGCTTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
CDS-3UTR CCA 90 bp TTCTCGGCCAGAGATGAGAAGGCTCCTTTAAACCAAAAATGTCATGGCTCTGCCCGGATGCAGAACTCGTaGAAGCTGAGCACCGCCCTA +
Preference number: 4 (lower is better)
Translates to: FSARDEKAPLNQKCHGSARMQNS*KLSTAL
Trigger: TAGGGCGGTGCTCAGCTTCCACGAGTTCTGCATCCG...GGCAGAGCCATGACATTTTTGGTTTAAAGGAGCCTTCTCATCTCTGGCCGAGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393713.7
CDS-3UTR TCA 90 bp GACAGGCTGCCAGGCTACCAAGTATCGAAGCCAGTCCAGCAGTTGCCCATACATTTCTGGAGAGAGATCTaGCATATCAACCTCATCCAG +
Preference number: 4 (lower is better)
Translates to: DRLPGYQVSKPVQQLPIHFWREI*HINLIQ
Trigger: CTGGATGAGGTTGATATGTCAGATCTCTCTCCAGAA...ATGTATGGGCAACTGCTGGACTGGCTTCGATACTTGGTAGCCTGGCAGCCTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525243.5
CDS-3UTR TCA 90 bp GACAGGCTGCCAGGCTACCAAGTATCGAAGCCAGTCCAGCAGTTGCCCATACATAGCACACACACTGTCTaGAAGATGTTTGGTAGGCAT +
Preference number: 4 (lower is better)
Translates to: DRLPGYQVSKPVQQLPIHSTHTV*KMFGRH
Trigger: ATGCCTACCAAACATCTTTCAGACAGTGTGTGTGCT...ATGTATGGGCAACTGCTGGACTGGCTTCGATACTTGGTAGCCTGGCAGCCTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525243.5
ENST00000526549.5
ENST00000530655.5
CDS-3UTR TCA 90 bp TTTGCAGTAGGGACACGTTTGCTTCTTTCCCACGATGCACCAGCCACGGATGCAAACTCGTGGAAGACATaGTTGCAGGACAGCCTATAC +
Preference number: 4 (lower is better)
Translates to: FAVGTRLLLSHDAPATDANSWKT*LQDSLY
Trigger: GTATAGGCTGTCCTGCAATCATGTCTTCCACGAGTT...TGCATCCGTGGCTGGTGCATCGTGGGAAAGAAGCAAACGTGTCCCTACTGCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525243.5
ENST00000526549.5
ENST00000530655.5
CDS-3UTR TCA 90 bp GCAGAACTCGTGGAAGACATGATTGCAGGACAGCCTATACGTGTTCTCAATGATTGCCCATACATGACGTaGGGCCTCTCCCAGGGATTG +
Preference number: 4 (lower is better)
Translates to: AELVEDMIAGQPIRVLNDCPYMT*GLSQGL
Trigger: CAATCCCTGGGAGAGGCCTCACGTCATGTATGGGCA...ATCATTGAGAACACGTATAGGCTGTCCTGCAATCATGTCTTCCACGAGTTCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525243.5
ENST00000526549.5
ENST00000530655.5
CDS-3UTR TCA 90 bp GTGACAACATCCTGCTTCGTTCTTGCTGCCCTTGAAGGGGCAGGCCCTACTGAGAAAACAAATCTTCAATaGATTCTGAGGCCCCAAGGC +
Preference number: 4 (lower is better)
Translates to: VTTSCFVLAALEGAGPTEKTNLQ*ILRPQG
Trigger: GCCTTGGGGCCTCAGAATTCATTGAAGATTTGTTTT...CTCAGTAGGGCCTGCCCCTTCAAGGGCAGCAAGAACGAAGCAGGATGTTGTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
CDS-3UTR TCA 90 bp TCCATGGCGTGTGGGGTGGGTTTTCCACTGATGCTCTTCATCACTATTCCAGGCCATGGCCCAACTATATaGCCTCTATTCTTGGCTGAC +
Preference number: 4 (lower is better)
Translates to: SMACGVGFPLMLFITIPGHGPTI*PLFLAD
Trigger: GTCAGCCAAGAATAGAGGTCATATAGTTGGGCCATG...GCCTGGAATAGTGATGAAGAGCATCAGTGGAAAACCCACCCCACACGCCATGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393713.7
ENST00000526549.5
CDS-3UTR TCA 90 bp CACAAGCCTGAGTACGTTAGCTCTTCTATACTAAGTGCACCAGGCTTGAGCCCCCTTTCAAGAAGGAAGTaGTGTGGCAGAGTGACCGCT +
Preference number: 4 (lower is better)
Translates to: HKPEYVSSSILSAPGLSPLSRRK*CGRVTA
Trigger: AGCGGTCACTCTGCCACATCACTTCCTTCTTGAAAG...GGGGCTCAAGCCTGGTGCACTTAGTATAGAAGAGCTAACGTACTCAGGCTTGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
CDS-3UTR TCA 90 bp ATGACAGGCTGCCAGGCTACCAAGTATCGAAGCCAGTCCAGCAGTTGCCCATACGGGAGGACCCATGAATaGCAAAAATCATGTAGGGAT +
Preference number: 4 (lower is better)
Translates to: MTGCQATKYRSQSSSCPYGRTHE*QKSCRD
Trigger: ATCCCTACATGATTTTTGTCATTCATGGGTCCTCCC...GTATGGGCAACTGCTGGACTGGCTTCGATACTTGGTAGCCTGGCAGCCTGTCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393713.7
ENST00000526549.5
CDS-3UTR TCA 90 bp AAGAATGAGCTTGCACAAGGGGCCGTCAGTCATGGCTGCCAACAATTGCCCCATTTATTCAGACGGGAGTaGCAACATCCTGCTTCGTTC +
Preference number: 4 (lower is better)
Translates to: KNELAQGAVSHGCQQLPHLFRRE*QHPASF
Trigger: GAACGAAGCAGGATGTTGTCACTCCCGTCTGAATAA...ATGGGGCAATTGTTGGCAGCCATGACTGACGGCCCCTTGTGCAAGCTCATTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
CDS-3UTR GCA 90 bp GCAGAGAACAAGATCCAGATCACTAGGAACCTCCACCAGTGCAGCTTCACTGTGTGCTCGACCCTCCATTaGTCTTCTGGAGAGAGATCT +
Preference number: 4 (lower is better)
Translates to: AENKIQITRNLHQCSFTVCSTLH*SSGERS
Trigger: AGATCTCTCTCCAGAAGAGCAATGGAGGGTCGAGCA...CACAGTGAAGCTGCACTGGTGGAGGTTCCTAGTGATCTGGATCTTGTTCTCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393711.7
CDS-3UTR GCA 90 bp GACATGATTGCAGGACAGCCTATACGTGTTCTCAATGATCCCCTCTTCACTGACGGCCACCACCAAGGTTaGGATGAGGATGAGGACCAT +
Preference number: 4 (lower is better)
Translates to: DMIAGQPIRVLNDPLFTDGHHQG*DEDEDH
Trigger: ATGGTCCTCATCCTCATCGCAACCTTGGTGGTGGCC...GTCAGTGAAGAGGGGATCATTGAGAACACGTATAGGCTGTCCTGCAATCATGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526549.5
ENST00000530655.5
CDS-3UTR GCA 90 bp ATGATGACAGGCTGCCAGGCTACCAAGTATCGAAGCCAGTCCAGCAGTTGCCCAAGAAGAGAAGGGAGATaGCAAAGTCCATGGCATCTT +
Preference number: 4 (lower is better)
Translates to: MMTGCQATKYRSQSSSCPRREGR*QSPWHL
Trigger: AAGATGCCATGGACTTTGGCATCTCCCTTCTCTTCT...TGGGCAACTGCTGGACTGGCTTCGATACTTGGTAGCCTGGCAGCCTGTCATCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393713.7
ENST00000525243.5
ENST00000526549.5
ENST00000530655.5
CDS-3UTR GCA 90 bp TGGCACAAGCCTGAGTACGTTAGCTCTTCTATACTAAGTGCACCAGGCTTGAGCACGTCCACAAAGATCTaGTGCCCACACACAGCACAC +
Preference number: 4 (lower is better)
Translates to: WHKPEYVSSSILSAPGLSTSTKI*CPHTAH
Trigger: GTGTGCTGTGTGTGGGCAGCAGATCTTTGTGGACGT...GCTCAAGCCTGGTGCACTTAGTATAGAAGAGCTAACGTACTCAGGCTTGTGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361756.8
ENST00000526549.5
ENST00000530137.1
CDS-3UTR GCA 90 bp CACGGATGCAGAACTCGTGGAAGACATGATTGCAGGACAGCCTATACGTGTTCTACGTCCACAAAGATCTaGTGCCCACACACAGCACAC +
Preference number: 4 (lower is better)
Translates to: HGCRTRGRHDCRTAYTCSTSTKI*CPHTAH
Trigger: GTGTGCTGTGTGTGGGCAGCAGATCTTTGTGGACGT...AGAACACGTATAGGCTGTCCTGCAATCATGTCTTCCACGAGTTCTGCATCCGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525243.5
ENST00000526549.5
ENST00000530655.5
CDS-3UTR GCA 90 bp GACATGATTGCAGGACAGCCTATACGTGTTCTCAATGATCCCCTCTTCACTGACGCTTCTTTCCCACGATaGACCAGCCACGGATGCAGA +
Preference number: 4 (lower is better)
Translates to: DMIAGQPIRVLNDPLFTDASFPR*TSHGCR
Trigger: TCTGCATCCGTGGCTGGTGCATCGTGGGAAAGAAGC...GTCAGTGAAGAGGGGATCATTGAGAACACGTATAGGCTGTCCTGCAATCATGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526549.5
ENST00000530655.5
CDS-3UTR GCA 90 bp GTGTTCTCAATGATCCCCTCTTCACTGACGTCCACAAAGATCTGCTGCCCACACCCAATGATGACAGGCTaGCAGGCTACCAAGTATCGA +
Preference number: 4 (lower is better)
Translates to: VFSMIPSSLTSTKICCPHPMMTG*QATKYR
Trigger: TCGATACTTGGTAGCCTGGCAGCCTGTCATCATTGG...GTGTGGGCAGCAGATCTTTGTGGACGTCAGTGAAGAGGGGATCATTGAGAACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526549.5
ENST00000530655.5
CDS-3UTR CCA 90 bp CGGAAGGTAACAAAGGCTGTGACAGCAGAGAACAAGATCCAGATCACTAGGAACGCATGCATAGCTTCATaGCCACGGTGCTTGGCATGC +
Preference number: 4 (lower is better)
Translates to: RKVTKAVTAENKIQITRNACIAS*PRCLAC
Trigger: GCATGCCAAGCACCGTGGCCATGAAGCTATGCATGC...GTTCCTAGTGATCTGGATCTTGTTCTCTGCTGTCACAGCCTTTGTTACCTTCCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393711.7
ENST00000526549.5
ENST00000530058.5
CDS-3UTR CCA 90 bp TTCTCGGCCAGAGATGAGAAGGCTCCTTTAAACCAAAAATGTCATGGCTCTGCCGCATGCATAGCTTCATaGCCACGGTGCTTGGCATGC +
Preference number: 4 (lower is better)
Translates to: FSARDEKAPLNQKCHGSAACIAS*PRCLAC
Trigger: GCATGCCAAGCACCGTGGCCATGAAGCTATGCATGC...GGCAGAGCCATGACATTTTTGGTTTAAAGGAGCCTTCTCATCTCTGGCCGAGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
CDS-3UTR CCA 90 bp AAATCTTCAATGAATTCTGAGGCCCCAAGGCTTCCCTTGTTGGCCAAGTCACTGGAGGTCCATGGCGTGTaGGGTGGGTTTTCCACTGAT +
Preference number: 4 (lower is better)
Translates to: KSSMNSEAPRLPLLAKSLEVHGV*GGFSTD
Trigger: ATCAGTGGAAAACCCACCCCACACGCCATGGACCTC...CAGTGACTTGGCCAACAAGGGAAGCCTTGGGGCCTCAGAATTCATTGAAGATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
CDS-3UTR CCA 90 bp GGGCGAGTATCCATGGTGCTGATTCTTCCAGTTGTCCCAAAACAAATCTTCAATTGGCAGAGTGACCGCTaGCACGTGTCACCACTCCAC +
Preference number: 4 (lower is better)
Translates to: GRVSMVLILPVVPKQIFNWQSDR*HVSPLH
Trigger: GTGGAGTGGTGACACGTGCCAGCGGTCACTCTGCCA...ATTGAAGATTTGTTTTGGGACAACTGGAAGAATCAGCACCATGGATACTCGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
CDS-3UTR CCA 90 bp TATAAACCAACCTTGGGGTTGTCTGTACTAGAGGTTTTCGGGTGGCTCGGAAGGAAGAAGGAAGTGATGTaGCAGAGTGACCGCTGGCAC +
Preference number: 4 (lower is better)
Translates to: YKPTLGLSVLEVFGWLGRKKEVM*QSDRWH
Trigger: GTGCCAGCGGTCACTCTGCCACATCACTTCCTTCTT...CCTTCCGAGCCACCCGAAAACCTCTAGTACAGACAACCCCAAGGTTGGTTTATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526549.5
CDS-3UTR CCA 90 bp TGCCCACGGGCGAGTATCCATGGTGCTGATTCTTCCAGTTGTCCCAAAACAAATAAGAAGGAAGTGATGTaGCAGAGTGACCGCTGGCAC +
Preference number: 4 (lower is better)
Translates to: CPRASIHGADSSSCPKTNKKEVM*QSDRWH
Trigger: GTGCCAGCGGTCACTCTGCCACATCACTTCCTTCTT...ATTTGTTTTGGGACAACTGGAAGAATCAGCACCATGGATACTCGCCCGTGGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
CDS-3UTR CCA 90 bp CATATTCTTCTGCCTCACGTACACACACACACACACACACACACGCATACGCACTGTAGGGATATTCCCTaGACTGGGAATCCCCTGCCA +
Preference number: 4 (lower is better)
Translates to: HILLPHVHTHTHTHTHTHCRDIP*TGNPLP
Trigger: TGGCAGGGGATTCCCAGTCCAGGGAATATCCCTACA...GTGCGTATGCGTGTGTGTGTGTGTGTGTGTGTGTACGTGAGGCAGAAGAATATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
3UTR CAA 72 bp TCATCACTATTCCAGGCCCAGGATGTAGTTGATGCCTaGGACTACACCAATGATGACAGGCTGCCAGGCTAC +
Preference number: 4 (lower is better)
Translates to: SSLFQAQDVVDA*DYTNDDRLPGY
Trigger: GTAGCCTGGCAGCCTGTCATCATTGGTGTAGTCCAAGGCATCAACTACATCCTGGGCCTGGAATAGTGATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393713.7
ENST00000525243.5
ENST00000526549.5
CDS-3UTR TCA 90 bp CAAGTATCGAAGCCAGTCCAGCAGTTGCCCATACATGACGTGAGGCCTCTCCCATGCCAGTGGCATAGCTaGTTTTATAGATTAGCAGGA +
Preference number: 4 (lower is better)
Translates to: QVSKPVQQLPIHDVRPLPCQWHS*FYRLAG
Trigger: TCCTGCTAATCTATAAAATCAGCTATGCCACTGGCA...TGGGAGAGGCCTCACGTCATGTATGGGCAACTGCTGGACTGGCTTCGATACTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393713.7
ENST00000526549.5
ENST00000530655.5
CDS-3UTR TCA 90 bp CCTGAGGTCCATGGCGTGTGGGGTGGGTTTTCCACTGATGCTCTTCATCACTATAGCACACACACTGTCTaGAAGATGTTTGGTAGGCAT +
Preference number: 4 (lower is better)
Translates to: PEVHGVWGGFSTDALHHYSTHTV*KMFGRH
Trigger: ATGCCTACCAAACATCTTTCAGACAGTGTGTGTGCT...ATAGTGATGAAGAGCATCAGTGGAAAACCCACCCCACACGCCATGGACCTCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525243.5
ENST00000526549.5
CDS-3UTR TCA 90 bp CAGCAGAGAACAAGATCCAGATCACTAGGAACCTCCACCAGTGCAGCTTCACTGGGGTGGGTTTTCCACTaGTGCTCTTCATCACTATTC +
Preference number: 4 (lower is better)
Translates to: QQRTRSRSLGTSTSAASLGWVFH*CSSSLF
Trigger: GAATAGTGATGAAGAGCATCAGTGGAAAACCCACCC...CAGTGAAGCTGCACTGGTGGAGGTTCCTAGTGATCTGGATCTTGTTCTCTGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526549.5
CDS-3UTR TCA 90 bp GCTTCCCTTGTTGGCCAAGTCACTGATAAGGTTCCACTTGCCTCAACCAGCCTAGGGTGGGTTTTCCACTaGTGCTCTTCATCACTATTC +
Preference number: 4 (lower is better)
Translates to: ASLVGQVTDKVPLASTSLGWVFH*CSSSLF
Trigger: GAATAGTGATGAAGAGCATCAGTGGAAAACCCACCC...TAGGCTGGTTGAGGCAAGTGGAACCTTATCAGTGACTTGGCCAACAAGGGAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
CDS-3UTR TCA 90 bp TTCTTCCAGTTGTCCCAAAACAAATCTTCAATGAATTCTGAGGCCCCAAGGCTTGCCCAAGCACCCCTTTaGGTCTTTCCCACCCAGGAG +
Preference number: 4 (lower is better)
Translates to: FFQLSQNKSSMNSEAPRLAQAPL*VFPTQE
Trigger: CTCCTGGGTGGGAAAGACTCAAAGGGGTGCTTGGGC...AAGCCTTGGGGCCTCAGAATTCATTGAAGATTTGTTTTGGGACAACTGGAAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
CDS-3UTR TCA 90 bp CCGTCAGTCATGGCTGCCAACAATTGCCCCATGGCCCAACTATATGACCTCTATATCTTCAATGAATTCTaGGGCCCCAAGGCTTCCCTT +
Preference number: 4 (lower is better)
Translates to: PSVMAANNCPMAQLYDLYIFNEF*GPKASL
Trigger: AAGGGAAGCCTTGGGGCCTCAGAATTCATTGAAGAT...ATAGAGGTCATATAGTTGGGCCATGGGGCAATTGTTGGCAGCCATGACTGACGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
CDS-3UTR TCA 90 bp TTCAAGAAGGAAGTGATGTGGCAGAGTGACCGCTGGCACGTGTCACCACTCCACAAAACAAATCTTCAATaGATTCTGAGGCCCCAAGGC +
Preference number: 4 (lower is better)
Translates to: FKKEVMWQSDRWHVSPLHKTNLQ*ILRPQG
Trigger: GCCTTGGGGCCTCAGAATTCATTGAAGATTTGTTTT...GTGGAGTGGTGACACGTGCCAGCGGTCACTCTGCCACATCACTTCCTTCTTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
CDS-3UTR TCA 90 bp CCGTCAGTCATGGCTGCCAACAATTGCCCCATGGCCCAACTATATGACCTCTATCAAGGACATATCATCTaGCACAGGGAGAAGCTGACA +
Preference number: 4 (lower is better)
Translates to: PSVMAANNCPMAQLYDLYQGHII*HREKLT
Trigger: TGTCAGCTTCTCCCTGTGTCAGATGATATGTCCTTG...ATAGAGGTCATATAGTTGGGCCATGGGGCAATTGTTGGCAGCCATGACTGACGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
CDS-3UTR TCA 90 bp GATGCCTTGGACTACACCAATGATGACAGGCTGCCAGGCTACCAAGTATCGAAGTTATTCAGACGGGAGTaGCAACATCCTGCTTCGTTC +
Preference number: 4 (lower is better)
Translates to: DALDYTNDDRLPGYQVSKLFRRE*QHPASF
Trigger: GAACGAAGCAGGATGTTGTCACTCCCGTCTGAATAA...CTTCGATACTTGGTAGCCTGGCAGCCTGTCATCATTGGTGTAGTCCAAGGCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393713.7
ENST00000526549.5
CDS-3UTR GCA 90 bp AGAGATGAGAAGGCTCCTTTAAACCAAAAATGTCATGGCTCTGCCCCCACCCTGTGCTCGACCCTCCATTaGTCTTCTGGAGAGAGATCT +
Preference number: 4 (lower is better)
Translates to: RDEKAPLNQKCHGSAPTLCSTLH*SSGERS
Trigger: AGATCTCTCTCCAGAAGAGCAATGGAGGGTCGAGCA...CAGGGTGGGGGCAGAGCCATGACATTTTTGGTTTAAAGGAGCCTTCTCATCTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000361756.8
CDS-3UTR GCA 90 bp GGGCGAGTATCCATGGTGCTGATTCTTCCAGTTGTCCCAAAACAAATCTTCAATCTTGGCATGCATGCGTaGGTGCTCGACCCTCCATTG +
Preference number: 4 (lower is better)
Translates to: GRVSMVLILPVVPKQIFNLGMHA*VLDPPL
Trigger: CAATGGAGGGTCGAGCACGCACGCATGCATGCCAAG...ATTGAAGATTTGTTTTGGGACAACTGGAAGAATCAGCACCATGGATACTCGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361756.8
CDS-3UTR GCA 90 bp CACGGATGCAGAACTCGTGGAAGACATGATTGCAGGACAGCCTATACGTGTTCTAGGACCATTTCAGCATaGATAGCTTCATGGCCACGG +
Preference number: 4 (lower is better)
Translates to: HGCRTRGRHDCRTAYTCSRTISA*IASWPR
Trigger: CCGTGGCCATGAAGCTATGCATGCTGAAATGGTCCT...AGAACACGTATAGGCTGTCCTGCAATCATGTCTTCCACGAGTTCTGCATCCGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525243.5
ENST00000526549.5
ENST00000530655.5
CDS-3UTR GCA 90 bp ACAAAGGCTGTGACAGCAGAGAACAAGATCCAGATCACTAGGAACCTCCACCAGAGGACCATTTCAGCATaGATAGCTTCATGGCCACGG +
Preference number: 4 (lower is better)
Translates to: TKAVTAENKIQITRNLHQRTISA*IASWPR
Trigger: CCGTGGCCATGAAGCTATGCATGCTGAAATGGTCCT...CTGGTGGAGGTTCCTAGTGATCTGGATCTTGTTCTCTGCTGTCACAGCCTTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393711.7
ENST00000526549.5
ENST00000530058.5
CDS-3UTR GCA 90 bp GCCAACAATTGCCCCATGGCCCAACTATATGACCTCTATTCTTGGCTGACCACAAGGACCATTTCAGCATaGATAGCTTCATGGCCACGG +
Preference number: 4 (lower is better)
Translates to: ANNCPMAQLYDLYSWLTTRTISA*IASWPR
Trigger: CCGTGGCCATGAAGCTATGCATGCTGAAATGGTCCT...TGTGGTCAGCCAAGAATAGAGGTCATATAGTTGGGCCATGGGGCAATTGTTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
CDS-3UTR GCA 90 bp CGGGCGAGTATCCATGGTGCTGATTCTTCCAGTTGTCCCAAAACAAATCTTCAAGGCCACCACCAAGGTTaGGATGAGGATGAGGACCAT +
Preference number: 4 (lower is better)
Translates to: RASIHGADSSSCPKTNLQGHHQG*DEDEDH
Trigger: ATGGTCCTCATCCTCATCGCAACCTTGGTGGTGGCC...TTGAAGATTTGTTTTGGGACAACTGGAAGAATCAGCACCATGGATACTCGCCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
CDS-3UTR GCA 90 bp CCTGAGGTCCATGGCGTGTGGGGTGGGTTTTCCACTGATGCTCTTCATCACTATGAACCCTATGGTAGATaGCATGTAGTCTGCACACAT +
Preference number: 4 (lower is better)
Translates to: PEVHGVWGGFSTDALHHYEPYGR*HVVCTH
Trigger: ATGTGTGCAGACTACATGGCATCTACCATAGGGTTC...ATAGTGATGAAGAGCATCAGTGGAAAACCCACCCCACACGCCATGGACCTCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525243.5
ENST00000526549.5
CDS-3UTR GCA 90 bp TGCCCACGGGCGAGTATCCATGGTGCTGATTCTTCCAGTTGTCCCAAAACAAATTCCACAAAGATCTGCTaGCCACACACAGCACACACA +
Preference number: 4 (lower is better)
Translates to: CPRASIHGADSSSCPKTNSTKIC*PHTAHT
Trigger: TGTGTGTGCTGTGTGTGGGCAGCAGATCTTTGTGGA...ATTTGTTTTGGGACAACTGGAAGAATCAGCACCATGGATACTCGCCCGTGGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361756.8
ENST00000526549.5
ENST00000530137.1
CDS-3UTR GCA 90 bp CGGGCGAGTATCCATGGTGCTGATTCTTCCAGTTGTCCCAAAACAAATCTTCAAGCTTCTTTCCCACGATaGACCAGCCACGGATGCAGA +
Preference number: 4 (lower is better)
Translates to: RASIHGADSSSCPKTNLQASFPR*TSHGCR
Trigger: TCTGCATCCGTGGCTGGTGCATCGTGGGAAAGAAGC...TTGAAGATTTGTTTTGGGACAACTGGAAGAATCAGCACCATGGATACTCGCCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
CDS-3UTR GCA 90 bp GATGCCTTGGACTACACCAATGATGACAGGCTGCCAGGCTACCAAGTATCGAAGGGTCTACCTTCTCTTTaGAGTAGGGACACGTTTGCT +
Preference number: 4 (lower is better)
Translates to: DALDYTNDDRLPGYQVSKGLPSL*SRDTFA
Trigger: AGCAAACGTGTCCCTACTGCAAAGAGAAGGTAGACC...CTTCGATACTTGGTAGCCTGGCAGCCTGTCATCATTGGTGTAGTCCAAGGCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393713.7
ENST00000525243.5
ENST00000526549.5
CDS-3UTR GCA 90 bp AGAGATGAGAAGGCTCCTTTAAACCAAAAATGTCATGGCTCTGCCCCCACCCTGCTCTTCTATACTAAGTaGACCAGGCTTGAGCCCCAC +
Preference number: 4 (lower is better)
Translates to: RDEKAPLNQKCHGSAPTLLFYTK*TRLEPH
Trigger: GTGGGGCTCAAGCCTGGTGCACTTAGTATAGAAGAG...CAGGGTGGGGGCAGAGCCATGACATTTTTGGTTTAAAGGAGCCTTCTCATCTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
CDS-3UTR GCA 90 bp GTCTGTACTAGAGGTTTTCGGGTGGCTCGGAAGGTAACAAAGGCTGTGACAGCAATGGCTGCCAACAATTaGCCCATGGCCCAACTATAT +
Preference number: 4 (lower is better)
Translates to: VCTRGFRVARKVTKAVTAMAANN*PMAQLY
Trigger: ATATAGTTGGGCCATGGGGCAATTGTTGGCAGCCAT...TGCTGTCACAGCCTTTGTTACCTTCCGAGCCACCCGAAAACCTCTAGTACAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526549.5
CDS-3UTR GCA 90 bp CATATTCTTCTGCCTCACGTACACACACACACACACACACACACGCATACGCACTCCCTAGAAACCCAATaGCGAAGGCCCATGTTTGAC +
Preference number: 4 (lower is better)
Translates to: HILLPHVHTHTHTHTHTHSLETQ*RRPMFD
Trigger: GTCAAACATGGGCCTTCGGCATTGGGTTTCTAGGGA...GTGCGTATGCGTGTGTGTGTGTGTGTGTGTGTGTACGTGAGGCAGAAGAATATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
CDS-3UTR GCA 90 bp TTCTTCCAGTTGTCCCAAAACAAATCTTCAATGAATTCTGAGGCCCCAAGGCTTGCATGCATGCGTGCGTaGTCGACCCTCATCCAGCTC +
Preference number: 4 (lower is better)
Translates to: FFQLSQNKSSMNSEAPRLACMRA*STLIQL
Trigger: GAGCTGGATGAGGGTCGAGCACGCACGCATGCATGC...AAGCCTTGGGGCCTCAGAATTCATTGAAGATTTGTTTTGGGACAACTGGAAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
CDS-3UTR GCA 90 bp GGGCGAGTATCCATGGTGCTGATTCTTCCAGTTGTCCCAAAACAAATCTTCAATCTTGGCATGCATGCGTaGGTGCTCGACCCTCATCCA +
Preference number: 4 (lower is better)
Translates to: GRVSMVLILPVVPKQIFNLGMHA*VLDPHP
Trigger: TGGATGAGGGTCGAGCACGCACGCATGCATGCCAAG...ATTGAAGATTTGTTTTGGGACAACTGGAAGAATCAGCACCATGGATACTCGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
CDS-3UTR GCA 90 bp ACAAAGGCTGTGACAGCAGAGAACAAGATCCAGATCACTAGGAACCTCCACCAGAGGAACCTCCACCAGTaGAGCTTCAATTGTAGGAGC +
Preference number: 4 (lower is better)
Translates to: TKAVTAENKIQITRNLHQRNLHQ*SFNCRS
Trigger: GCTCCTACAATTGAAGCTGCACTGGTGGAGGTTCCT...CTGGTGGAGGTTCCTAGTGATCTGGATCTTGTTCTCTGCTGTCACAGCCTTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530058.5
CDS-3UTR CCA 90 bp CAAAACAAATCTTCAATGAATTCTGAGGCCCCAAGGCTTCCCTTGTTGGCCAAGGAGGTCCATGGCGTGTaGGGTGGGTTTTCCACTGAT +
Preference number: 4 (lower is better)
Translates to: QNKSSMNSEAPRLPLLAKEVHGV*GGFSTD
Trigger: ATCAGTGGAAAACCCACCCCACACGCCATGGACCTC...CTTGGCCAACAAGGGAAGCCTTGGGGCCTCAGAATTCATTGAAGATTTGTTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
CDS-3UTR CCA 90 bp CAGTTGTCCCAAAACAAATCTTCAATGAATTCTGAGGCCCCAAGGCTTCCCTTGGAGGTCCATGGCGTGTaGGGTGGGTTTTCCACTGAT +
Preference number: 4 (lower is better)
Translates to: QLSQNKSSMNSEAPRLPLEVHGV*GGFSTD
Trigger: ATCAGTGGAAAACCCACCCCACACGCCATGGACCTC...CAAGGGAAGCCTTGGGGCCTCAGAATTCATTGAAGATTTGTTTTGGGACAACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
CDS-3UTR CCA 90 bp GCCAACAATTGCCCCATGGCCCAACTATATGACCTCTATTCTTGGCTGACCACAAAACCAAAAATGTCATaGCTCTGCCCCCACCCTGCT +
Preference number: 4 (lower is better)
Translates to: ANNCPMAQLYDLYSWLTTKPKMS*LCPHPA
Trigger: AGCAGGGTGGGGGCAGAGCCATGACATTTTTGGTTT...TGTGGTCAGCCAAGAATAGAGGTCATATAGTTGGGCCATGGGGCAATTGTTGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
CDS-3UTR CCA 90 bp GTCATGGCTGCCAACAATTGCCCCATGGCCCAACTATATGACCTCTATTCTTGGAAACCAAAAATGTCATaGCTCTGCCCCCACCCTGCT +
Preference number: 4 (lower is better)
Translates to: VMAANNCPMAQLYDLYSWKPKMS*LCPHPA
Trigger: AGCAGGGTGGGGGCAGAGCCATGACATTTTTGGTTT...CCAAGAATAGAGGTCATATAGTTGGGCCATGGGGCAATTGTTGGCAGCCATGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
CDS-3UTR CCA 90 bp CCAGCAGTGTTCTCGGCCAGAGATGAGAAGGCTCCTTTAAACCAAAAATGTCATCCAGCCTATAGCTCTTaGACAGGGGGAGACAGAGTC +
Preference number: 4 (lower is better)
Translates to: PAVFSARDEKAPLNQKCHPAYSS*TGGDRV
Trigger: GACTCTGTCTCCCCCTGTCCAAGAGCTATAGGCTGG...ATGACATTTTTGGTTTAAAGGAGCCTTCTCATCTCTGGCCGAGAACACTGCTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
CDS-3UTR CCA 90 bp CACAAGCCTGAGTACGTTAGCTCTTCTATACTAAGTGCACCAGGCTTGAGCCCCCCAACAATTGCCCCATaGCCCAACTATATGACCTCT +
Preference number: 4 (lower is better)
Translates to: HKPEYVSSSILSAPGLSPPTIAP*PNYMTS
Trigger: AGAGGTCATATAGTTGGGCCATGGGGCAATTGTTGG...GGGGCTCAAGCCTGGTGCACTTAGTATAGAAGAGCTAACGTACTCAGGCTTGTG
50% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
CDS-3UTR CCA 90 bp GATGCCTTGGACTACACCAATGATGACAGGCTGCCAGGCTACCAAGTATCGAAGCCAACAATTGCCCCATaGCCCAACTATATGACCTCT +
Preference number: 4 (lower is better)
Translates to: DALDYTNDDRLPGYQVSKPTIAP*PNYMTS
Trigger: AGAGGTCATATAGTTGGGCCATGGGGCAATTGTTGG...CTTCGATACTTGGTAGCCTGGCAGCCTGTCATCATTGGTGTAGTCCAAGGCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393713.7
ENST00000526549.5
CDS-3UTR CCA 90 bp CCGTCAGTCATGGCTGCCAACAATTGCCCCATGGCCCAACTATATGACCTCTATCCAACAATTGCCCCATaGCCCAACTATATGACCTCT +
Preference number: 4 (lower is better)
Translates to: PSVMAANNCPMAQLYDLYPTIAP*PNYMTS
Trigger: AGAGGTCATATAGTTGGGCCATGGGGCAATTGTTGG...ATAGAGGTCATATAGTTGGGCCATGGGGCAATTGTTGGCAGCCATGACTGACGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
CDS-3UTR CCA 90 bp CAGTTGTCCCAAAACAAATCTTCAATGAATTCTGAGGCCCCAAGGCTTCCCTTGGGATATTCCCTGGACTaGGAATCCCCTGCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: QLSQNKSSMNSEAPRLPLGYSLD*ESPASF
Trigger: GAAGCTGGCAGGGGATTCCCAGTCCAGGGAATATCC...CAAGGGAAGCCTTGGGGCCTCAGAATTCATTGAAGATTTGTTTTGGGACAACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
CDS-3UTR CCA 90 bp GTAACAAAGGCTGTGACAGCAGAGAACAAGATCCAGATCACTAGGAACCTCCACTCAATTGTAGGAGCGTaGGTGCCTCTGCTTCCACTG +
Preference number: 4 (lower is better)
Translates to: VTKAVTAENKIQITRNLHSIVGA*VPLLPL
Trigger: CAGTGGAAGCAGAGGCACCCACGCTCCTACAATTGA...GTGGAGGTTCCTAGTGATCTGGATCTTGTTCTCTGCTGTCACAGCCTTTGTTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530058.5
CDS-3UTR TCA 90 bp GGGGTTGTCTGTACTAGAGGTTTTCGGGTGGCTCGGAAGGTAACAAAGGCTGTGTGCCAGTGGCATAGCTaGTTTTATAGATTAGCAGGA +
Preference number: 4 (lower is better)
Translates to: GVVCTRGFRVARKVTKAVCQWHS*FYRLAG
Trigger: TCCTGCTAATCTATAAAATCAGCTATGCCACTGGCA...CACAGCCTTTGTTACCTTCCGAGCCACCCGAAAACCTCTAGTACAGACAACCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000526549.5
ENST00000530058.5
CDS-3UTR TCA 90 bp TGCCCACGGGCGAGTATCCATGGTGCTGATTCTTCCAGTTGTCCCAAAACAAATGGGTGGGTTTTCCACTaGTGCTCTTCATCACTATTC +
Preference number: 4 (lower is better)
Translates to: CPRASIHGADSSSCPKTNGWVFH*CSSSLF
Trigger: GAATAGTGATGAAGAGCATCAGTGGAAAACCCACCC...ATTTGTTTTGGGACAACTGGAAGAATCAGCACCATGGATACTCGCCCGTGGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
CDS-3UTR TCA 90 bp CTCGTGGAAGACATGATTGCAGGACAGCCTATACGTGTTCTCAATGATCCCCTCGGGTGGGTTTTCCACTaGTGCTCTTCATCACTATTC +
Preference number: 4 (lower is better)
Translates to: LVEDMIAGQPIRVLNDPLGWVFH*CSSSLF
Trigger: GAATAGTGATGAAGAGCATCAGTGGAAAACCCACCC...GAGGGGATCATTGAGAACACGTATAGGCTGTCCTGCAATCATGTCTTCCACGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525243.5
ENST00000526549.5
CDS-3UTR TCA 90 bp TTCTCGGCCAGAGATGAGAAGGCTCCTTTAAACCAAAAATGTCATGGCTCTGCCGTTCTCGGCCAGAGATaGGAAGGCTCCTTTAAACCA +
Preference number: 4 (lower is better)
Translates to: FSARDEKAPLNQKCHGSAVLGQR*EGSFKP
Trigger: TGGTTTAAAGGAGCCTTCTCATCTCTGGCCGAGAAC...GGCAGAGCCATGACATTTTTGGTTTAAAGGAGCCTTCTCATCTCTGGCCGAGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
CDS-3UTR TCA 90 bp CATATTCTTCTGCCTCACGTACACACACACACACACACACACACGCATACGCACATCTTCAATGAATTCTaGGGCCCCAAGGCTTCCCTT +
Preference number: 4 (lower is better)
Translates to: HILLPHVHTHTHTHTHTHIFNEF*GPKASL
Trigger: AAGGGAAGCCTTGGGGCCTCAGAATTCATTGAAGAT...GTGCGTATGCGTGTGTGTGTGTGTGTGTGTGTGTACGTGAGGCAGAAGAATATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
CDS-3UTR TCA 90 bp GTAGTTGATGCCTTGGACTACACCAATGATGACAGGCTGCCAGGCTACCAAGTAATCTTCAATGAATTCTaGGGCCCCAAGGCTTCCCTT +
Preference number: 4 (lower is better)
Translates to: VVDALDYTNDDRLPGYQVIFNEF*GPKASL
Trigger: AAGGGAAGCCTTGGGGCCTCAGAATTCATTGAAGAT...TACTTGGTAGCCTGGCAGCCTGTCATCATTGGTGTAGTCCAAGGCATCAACTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393713.7
ENST00000526549.5
CDS-3UTR TCA 90 bp GCCAACAATTGCCCCATGGCCCAACTATATGACCTCTATTCTTGGCTGACCACACATGGCCCAACTATATaGCCTCTATTCTTGGCTGAC +
Preference number: 4 (lower is better)
Translates to: ANNCPMAQLYDLYSWLTTHGPTI*PLFLAD
Trigger: GTCAGCCAAGAATAGAGGTCATATAGTTGGGCCATG...TGTGGTCAGCCAAGAATAGAGGTCATATAGTTGGGCCATGGGGCAATTGTTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
CDS-3UTR TCA 90 bp CATATTCTTCTGCCTCACGTACACACACACACACACACACACACGCATACGCACCATGGCCCAACTATATaGCCTCTATTCTTGGCTGAC +
Preference number: 4 (lower is better)
Translates to: HILLPHVHTHTHTHTHTHHGPTI*PLFLAD
Trigger: GTCAGCCAAGAATAGAGGTCATATAGTTGGGCCATG...GTGCGTATGCGTGTGTGTGTGTGTGTGTGTGTGTACGTGAGGCAGAAGAATATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
CDS-3UTR TCA 90 bp GCCAACAATTGCCCCATGGCCCAACTATATGACCTCTATTCTTGGCTGACCACACAAGGACATATCATCTaGCACAGGGAGAAGCTGACA +
Preference number: 4 (lower is better)
Translates to: ANNCPMAQLYDLYSWLTTQGHII*HREKLT
Trigger: TGTCAGCTTCTCCCTGTGTCAGATGATATGTCCTTG...TGTGGTCAGCCAAGAATAGAGGTCATATAGTTGGGCCATGGGGCAATTGTTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
CDS-3UTR GCA 90 bp ATGATTGCAGGACAGCCTATACGTGTTCTCAATGATCCCCTCTTCACTGACGTCAGGACCATTTCAGCATaGATAGCTTCATGGCCACGG +
Preference number: 4 (lower is better)
Translates to: MIAGQPIRVLNDPLFTDVRTISA*IASWPR
Trigger: CCGTGGCCATGAAGCTATGCATGCTGAAATGGTCCT...GACGTCAGTGAAGAGGGGATCATTGAGAACACGTATAGGCTGTCCTGCAATCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526549.5
ENST00000530655.5
CDS-3UTR GCA 90 bp GGTTTTCGGGTGGCTCGGAAGGTAACAAAGGCTGTGACAGCAGAGAACAAGATCAGAAGAGAAGGGAGATaGCAAAGTCCATGGCATCTT +
Preference number: 4 (lower is better)
Translates to: GFRVARKVTKAVTAENKIRREGR*QSPWHL
Trigger: AAGATGCCATGGACTTTGGCATCTCCCTTCTCTTCT...GATCTTGTTCTCTGCTGTCACAGCCTTTGTTACCTTCCGAGCCACCCGAAAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526549.5
ENST00000530058.5
CDS-3UTR GCA 90 bp TCACTGACGTCCACAAAGATCTGCTGCCCACACACAGCACACACACTGTCTGAAAGAAGAGAAGGGAGATaGCAAAGTCCATGGCATCTT +
Preference number: 4 (lower is better)
Translates to: SLTSTKICCPHTAHTLSERREGR*QSPWHL
Trigger: AAGATGCCATGGACTTTGGCATCTCCCTTCTCTTCT...TTCAGACAGTGTGTGTGCTGTGTGTGGGCAGCAGATCTTTGTGGACGTCAGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526549.5
ENST00000530655.5
CDS-3UTR GCA 90 bp CAAAACAAATCTTCAATGAATTCTGAGGCCCCAAGGCTTCCCTTGTTGGCCAAGACGTCCACAAAGATCTaGTGCCCACACACAGCACAC +
Preference number: 4 (lower is better)
Translates to: QNKSSMNSEAPRLPLLAKTSTKI*CPHTAH
Trigger: GTGTGCTGTGTGTGGGCAGCAGATCTTTGTGGACGT...CTTGGCCAACAAGGGAAGCCTTGGGGCCTCAGAATTCATTGAAGATTTGTTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361756.8
ENST00000526549.5
ENST00000530137.1
CDS-3UTR GCA 90 bp CATATTCTTCTGCCTCACGTACACACACACACACACACACACACGCATACGCACGGTCTACCTTCTCTTTaGAGTAGGGACACGTTTGCT +
Preference number: 4 (lower is better)
Translates to: HILLPHVHTHTHTHTHTHGLPSL*SRDTFA
Trigger: AGCAAACGTGTCCCTACTGCAAAGAGAAGGTAGACC...GTGCGTATGCGTGTGTGTGTGTGTGTGTGTGTGTACGTGAGGCAGAAGAATATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
CDS-3UTR GCA 90 bp CTCGTGGAAGACATGATTGCAGGACAGCCTATACGTGTTCTCAATGATCCCCTCGGTCTACCTTCTCTTTaGAGTAGGGACACGTTTGCT +
Preference number: 4 (lower is better)
Translates to: LVEDMIAGQPIRVLNDPLGLPSL*SRDTFA
Trigger: AGCAAACGTGTCCCTACTGCAAAGAGAAGGTAGACC...GAGGGGATCATTGAGAACACGTATAGGCTGTCCTGCAATCATGTCTTCCACGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525243.5
ENST00000526549.5
ENST00000530655.5
CDS-3UTR GCA 90 bp GGTTTGATCTTGAATAATAAGTTAAGACCAAAGAGGGTAAACATGACAGCCATGCACCTGGGGCCTCAGTaGTCACCCGTGGCACAAGCC +
Preference number: 4 (lower is better)
Translates to: GLILNNKLRPKRVNMTAMHLGPQ*SPVAQA
Trigger: GGCTTGTGCCACGGGTGAGCACTGAGGCCCCAGGTG...CATGGCTGTCATGTTTACCCTCTTTGGTCTTAACTTATTATTCAAGATCAAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526549.5
CDS-3UTR GCA 90 bp AGCTCATGGAGCTTTATTCAGACGGGAGTGACAACATCCTGCTTCGTTCTTGCTCCGCCCTATGGTAGATaGCATGTAGTCTGCACACAT +
Preference number: 4 (lower is better)
Translates to: SSWSFIQTGVTTSCFVLAPPYGR*HVVCTH
Trigger: ATGTGTGCAGACTACATGGCATCTACCATAGGGCGG...AGCAAGAACGAAGCAGGATGTTGTCACTCCCGTCTGAATAAAGCTCCATGAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393713.7
CDS-3UTR CCA 90 bp GGGCGAGTATCCATGGTGCTGATTCTTCCAGTTGTCCCAAAACAAATCTTCAATGCATGCATAGCTTCATaGCCACGGTGCTTGGCATGC +
Preference number: 4 (lower is better)
Translates to: GRVSMVLILPVVPKQIFNACIAS*PRCLAC
Trigger: GCATGCCAAGCACCGTGGCCATGAAGCTATGCATGC...ATTGAAGATTTGTTTTGGGACAACTGGAAGAATCAGCACCATGGATACTCGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
CDS-3UTR TCA 90 bp ACAAAGGCTGTGACAGCAGAGAACAAGATCCAGATCACTAGGAACCTCCACCAGTTCTGGAGAGAGATCTaGCATATCAACCTCATCCAG +
Preference number: 4 (lower is better)
Translates to: TKAVTAENKIQITRNLHQFWREI*HINLIQ
Trigger: CTGGATGAGGTTGATATGTCAGATCTCTCTCCAGAA...CTGGTGGAGGTTCCTAGTGATCTGGATCTTGTTCTCTGCTGTCACAGCCTTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393711.7
ENST00000530058.5
CDS-3UTR TCA 90 bp TGCCCACGGGCGAGTATCCATGGTGCTGATTCTTCCAGTTGTCCCAAAACAAATAGCACACACACTGTCTaGAAGATGTTTGGTAGGCAT +
Preference number: 4 (lower is better)
Translates to: CPRASIHGADSSSCPKTNSTHTV*KMFGRH
Trigger: ATGCCTACCAAACATCTTTCAGACAGTGTGTGTGCT...ATTTGTTTTGGGACAACTGGAAGAATCAGCACCATGGATACTCGCCCGTGGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361756.8
ENST00000526549.5
ENST00000530137.1
CDS-3UTR TCA 90 bp GTCATGGCTGCCAACAATTGCCCCATGGCCCAACTATATGACCTCTATTCTTGGAGCACACACACTGTCTaGAAGATGTTTGGTAGGCAT +
Preference number: 4 (lower is better)
Translates to: VMAANNCPMAQLYDLYSWSTHTV*KMFGRH
Trigger: ATGCCTACCAAACATCTTTCAGACAGTGTGTGTGCT...CCAAGAATAGAGGTCATATAGTTGGGCCATGGGGCAATTGTTGGCAGCCATGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361756.8
ENST00000526549.5
ENST00000530137.1
CDS-3UTR TCA 90 bp AAATCTTCAATGAATTCTGAGGCCCCAAGGCTTCCCTTGTTGGCCAAGTCACTGAACTCGTGGAAGACATaGTTGCAGGACAGCCTATAC +
Preference number: 4 (lower is better)
Translates to: KSSMNSEAPRLPLLAKSLNSWKT*LQDSLY
Trigger: GTATAGGCTGTCCTGCAATCATGTCTTCCACGAGTT...CAGTGACTTGGCCAACAAGGGAAGCCTTGGGGCCTCAGAATTCATTGAAGATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361756.8
ENST00000526549.5
ENST00000530137.1
CDS-3UTR TCA 90 bp CAGTTGTCCCAAAACAAATCTTCAATGAATTCTGAGGCCCCAAGGCTTCCCTTGGTTCTCGGCCAGAGATaGGAAGGCTCCTTTAAACCA +
Preference number: 4 (lower is better)
Translates to: QLSQNKSSMNSEAPRLPLVLGQR*EGSFKP
Trigger: TGGTTTAAAGGAGCCTTCTCATCTCTGGCCGAGAAC...CAAGGGAAGCCTTGGGGCCTCAGAATTCATTGAAGATTTGTTTTGGGACAACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
CDS-3UTR TCA 90 bp CCAGCAGTGTTCTCGGCCAGAGATGAGAAGGCTCCTTTAAACCAAAAATGTCATGTTCTCGGCCAGAGATaGGAAGGCTCCTTTAAACCA +
Preference number: 4 (lower is better)
Translates to: PAVFSARDEKAPLNQKCHVLGQR*EGSFKP
Trigger: TGGTTTAAAGGAGCCTTCTCATCTCTGGCCGAGAAC...ATGACATTTTTGGTTTAAAGGAGCCTTCTCATCTCTGGCCGAGAACACTGCTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
CDS-3UTR TCA 90 bp TTCTTCCAGTTGTCCCAAAACAAATCTTCAATGAATTCTGAGGCCCCAAGGCTTAGGGGCAGGCCCTACTaGGCCATATTCCCTAGAAAC +
Preference number: 4 (lower is better)
Translates to: FFQLSQNKSSMNSEAPRLRGRPY*AIFPRN
Trigger: GTTTCTAGGGAATATGGCTCAGTAGGGCCTGCCCCT...AAGCCTTGGGGCCTCAGAATTCATTGAAGATTTGTTTTGGGACAACTGGAAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
CDS-3UTR GCA 90 bp AGAGATGAGAAGGCTCCTTTAAACCAAAAATGTCATGGCTCTGCCCCCACCCTGAGAAGAGAAGGGAGATaGCAAAGTCCATGGCATCTT +
Preference number: 4 (lower is better)
Translates to: RDEKAPLNQKCHGSAPTLRREGR*QSPWHL
Trigger: AAGATGCCATGGACTTTGGCATCTCCCTTCTCTTCT...CAGGGTGGGGGCAGAGCCATGACATTTTTGGTTTAAAGGAGCCTTCTCATCTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
CDS-3UTR GCA 90 bp CACGGATGCAGAACTCGTGGAAGACATGATTGCAGGACAGCCTATACGTGTTCTGAACCCTATGGTAGATaGCATGTAGTCTGCACACAT +
Preference number: 4 (lower is better)
Translates to: HGCRTRGRHDCRTAYTCSEPYGR*HVVCTH
Trigger: ATGTGTGCAGACTACATGGCATCTACCATAGGGTTC...AGAACACGTATAGGCTGTCCTGCAATCATGTCTTCCACGAGTTCTGCATCCGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525243.5
ENST00000526549.5
ENST00000530655.5
CDS-3UTR GCA 90 bp ATGATTGCAGGACAGCCTATACGTGTTCTCAATGATCCCCTCTTCACTGACGTCGGTCTACCTTCTCTTTaGAGTAGGGACACGTTTGCT +
Preference number: 4 (lower is better)
Translates to: MIAGQPIRVLNDPLFTDVGLPSL*SRDTFA
Trigger: AGCAAACGTGTCCCTACTGCAAAGAGAAGGTAGACC...GACGTCAGTGAAGAGGGGATCATTGAGAACACGTATAGGCTGTCCTGCAATCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526549.5
ENST00000530655.5
CDS-3UTR GCA 90 bp CAGTTGTCCCAAAACAAATCTTCAATGAATTCTGAGGCCCCAAGGCTTCCCTTGCTCTTCTATACTAAGTaGACCAGGCTTGAGCCCCAC +
Preference number: 4 (lower is better)
Translates to: QLSQNKSSMNSEAPRLPLLFYTK*TRLEPH
Trigger: GTGGGGCTCAAGCCTGGTGCACTTAGTATAGAAGAG...CAAGGGAAGCCTTGGGGCCTCAGAATTCATTGAAGATTTGTTTTGGGACAACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
CDS-3UTR GCA 90 bp CAAAACAAATCTTCAATGAATTCTGAGGCCCCAAGGCTTCCCTTGTTGGCCAAGTCCCTAGAAACCCAATaGCGAAGGCCCATGTTTGAC +
Preference number: 4 (lower is better)
Translates to: QNKSSMNSEAPRLPLLAKSLETQ*RRPMFD
Trigger: GTCAAACATGGGCCTTCGGCATTGGGTTTCTAGGGA...CTTGGCCAACAAGGGAAGCCTTGGGGCCTCAGAATTCATTGAAGATTTGTTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
CDS-3UTR GCA 90 bp CGGGCGAGTATCCATGGTGCTGATTCTTCCAGTTGTCCCAAAACAAATCTTCAATCCCTAGAAACCCAATaGCGAAGGCCCATGTTTGAC +
Preference number: 4 (lower is better)
Translates to: RASIHGADSSSCPKTNLQSLETQ*RRPMFD
Trigger: GTCAAACATGGGCCTTCGGCATTGGGTTTCTAGGGA...TTGAAGATTTGTTTTGGGACAACTGGAAGAATCAGCACCATGGATACTCGCCCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
CDS-3UTR TCA 90 bp AGCTCATGGAGCTTTATTCAGACGGGAGTGACAACATCCTGCTTCGTTCTTGCTTTCTGGAGAGAGATCTaGCATATCAACCTCATCCAG +
Preference number: 4 (lower is better)
Translates to: SSWSFIQTGVTTSCFVLAFWREI*HINLIQ
Trigger: CTGGATGAGGTTGATATGTCAGATCTCTCTCCAGAA...AGCAAGAACGAAGCAGGATGTTGTCACTCCCGTCTGAATAAAGCTCCATGAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361756.8
CDS-3UTR TCA 90 bp GTAACAAAGGCTGTGACAGCAGAGAACAAGATCCAGATCACTAGGAACCTCCACTTCTGGAGAGAGATCTaGCATATCAACCTCATCCAG +
Preference number: 4 (lower is better)
Translates to: VTKAVTAENKIQITRNLHFWREI*HINLIQ
Trigger: CTGGATGAGGTTGATATGTCAGATCTCTCTCCAGAA...GTGGAGGTTCCTAGTGATCTGGATCTTGTTCTCTGCTGTCACAGCCTTTGTTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393711.7
ENST00000530058.5
CDS-3UTR TCA 90 bp TGCCCACGGGCGAGTATCCATGGTGCTGATTCTTCCAGTTGTCCCAAAACAAATTGCCAGTGGCATAGCTaGTTTTATAGATTAGCAGGA +
Preference number: 4 (lower is better)
Translates to: CPRASIHGADSSSCPKTNCQWHS*FYRLAG
Trigger: TCCTGCTAATCTATAAAATCAGCTATGCCACTGGCA...ATTTGTTTTGGGACAACTGGAAGAATCAGCACCATGGATACTCGCCCGTGGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
CDS-3UTR TCA 90 bp GGGCGAGTATCCATGGTGCTGATTCTTCCAGTTGTCCCAAAACAAATCTTCAATGTTCTCGGCCAGAGATaGGAAGGCTCCTTTAAACCA +
Preference number: 4 (lower is better)
Translates to: GRVSMVLILPVVPKQIFNVLGQR*EGSFKP
Trigger: TGGTTTAAAGGAGCCTTCTCATCTCTGGCCGAGAAC...ATTGAAGATTTGTTTTGGGACAACTGGAAGAATCAGCACCATGGATACTCGCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
CDS-3UTR TCA 90 bp AAATCTTCAATGAATTCTGAGGCCCCAAGGCTTCCCTTGTTGGCCAAGTCACTGGGGAGGACCCATGAATaGCAAAAATCATGTAGGGAT +
Preference number: 4 (lower is better)
Translates to: KSSMNSEAPRLPLLAKSLGRTHE*QKSCRD
Trigger: ATCCCTACATGATTTTTGTCATTCATGGGTCCTCCC...CAGTGACTTGGCCAACAAGGGAAGCCTTGGGGCCTCAGAATTCATTGAAGATTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
CDS-3UTR TCA 90 bp CCAGCAGTGTTCTCGGCCAGAGATGAGAAGGCTCCTTTAAACCAAAAATGTCATGGAACAACCCACATCTaGAAGAGGGTCACCATTTTC +
Preference number: 4 (lower is better)
Translates to: PAVFSARDEKAPLNQKCHGTTHI*KRVTIF
Trigger: GAAAATGGTGACCCTCTTTCAGATGTGGGTTGTTCC...ATGACATTTTTGGTTTAAAGGAGCCTTCTCATCTCTGGCCGAGAACACTGCTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000526549.5
CDS-3UTR GCA 90 bp TCATATTCTTCTGCCTCACGTACACACACACACACACACACACACGCATACGCAGAACCCTATGGTAGATaGCATGTAGTCTGCACACAT +
Preference number: 4 (lower is better)
Translates to: SYSSASRTHTHTHTHAYAEPYGR*HVVCTH
Trigger: ATGTGTGCAGACTACATGGCATCTACCATAGGGTTC...TGCGTATGCGTGTGTGTGTGTGTGTGTGTGTGTACGTGAGGCAGAAGAATATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361756.8
ENST00000526549.5
ENST00000530137.1
CDS-3UTR GCA 90 bp CAGTTGTCCCAAAACAAATCTTCAATGAATTCTGAGGCCCCAAGGCTTCCCTTGATGGCTGCCAACAATTaGCCCATGGCCCAACTATAT +
Preference number: 4 (lower is better)
Translates to: QLSQNKSSMNSEAPRLPLMAANN*PMAQLY
Trigger: ATATAGTTGGGCCATGGGGCAATTGTTGGCAGCCAT...CAAGGGAAGCCTTGGGGCCTCAGAATTCATTGAAGATTTGTTTTGGGACAACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
CDS-3UTR GCA 90 bp TGCCCACGGGCGAGTATCCATGGTGCTGATTCTTCCAGTTGTCCCAAAACAAATTCTGTCATATTCTTCTaGCTCACGTACACACACACA +
Preference number: 4 (lower is better)
Translates to: CPRASIHGADSSSCPKTNSVIFF*LTYTHT
Trigger: TGTGTGTGTGTACGTGAGGCAGAAGAATATGACAGA...ATTTGTTTTGGGACAACTGGAAGAATCAGCACCATGGATACTCGCCCGTGGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
CDS-3UTR GCA 90 bp GGGCGAGTATCCATGGTGCTGATTCTTCCAGTTGTCCCAAAACAAATCTTCAATGGAGTGACAACATCCTaGTTCGTTCTTGCTGCCCTT +
Preference number: 4 (lower is better)
Translates to: GRVSMVLILPVVPKQIFNGVTTS*FVLAAL
Trigger: AAGGGCAGCAAGAACGAAGCAGGATGTTGTCACTCC...ATTGAAGATTTGTTTTGGGACAACTGGAAGAATCAGCACCATGGATACTCGCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
CDS-3UTR CCA 90 bp GTATCCATGGTGCTGATTCTTCCAGTTGTCCCAAAACAAATCTTCAATGAATTCAGGCCTTCAGCTACCTaGGAGCCCAGCAGTGTTCTC +
Preference number: 4 (lower is better)
Translates to: VSMVLILPVVPKQIFNEFRPSAT*EPSSVL
Trigger: GAGAACACTGCTGGGCTCCCAGGTAGCTGAAGGCCT...GAATTCATTGAAGATTTGTTTTGGGACAACTGGAAGAATCAGCACCATGGATAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
CDS-3UTR TCA 90 bp GGGCGAGTATCCATGGTGCTGATTCTTCCAGTTGTCCCAAAACAAATCTTCAATAACTCGTGGAAGACATaGTTGCAGGACAGCCTATAC +
Preference number: 4 (lower is better)
Translates to: GRVSMVLILPVVPKQIFNNSWKT*LQDSLY
Trigger: GTATAGGCTGTCCTGCAATCATGTCTTCCACGAGTT...ATTGAAGATTTGTTTTGGGACAACTGGAAGAATCAGCACCATGGATACTCGCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361756.8
ENST00000526549.5
ENST00000530137.1
CDS-3UTR TCA 90 bp GTATCCATGGTGCTGATTCTTCCAGTTGTCCCAAAACAAATCTTCAATGAATTCGGATCCACTGAAGAATaGGCTTGCACAAGGGGCCGT +
Preference number: 4 (lower is better)
Translates to: VSMVLILPVVPKQIFNEFGSTEE*ACTRGR
Trigger: ACGGCCCCTTGTGCAAGCTCATTCTTCAGTGGATCC...GAATTCATTGAAGATTTGTTTTGGGACAACTGGAAGAATCAGCACCATGGATAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
CDS-3UTR GCA 90 bp TTCTTCCAGTTGTCCCAAAACAAATCTTCAATGAATTCTGAGGCCCCAAGGCTTAGGACCATTTCAGCATaGATAGCTTCATGGCCACGG +
Preference number: 4 (lower is better)
Translates to: FFQLSQNKSSMNSEAPRLRTISA*IASWPR
Trigger: CCGTGGCCATGAAGCTATGCATGCTGAAATGGTCCT...AAGCCTTGGGGCCTCAGAATTCATTGAAGATTTGTTTTGGGACAACTGGAAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
CDS-3UTR GCA 90 bp TCATATTCTTCTGCCTCACGTACACACACACACACACACACACACGCATACGCATCTGTCATATTCTTCTaGCTCACGTACACACACACA +
Preference number: 4 (lower is better)
Translates to: SYSSASRTHTHTHTHAYASVIFF*LTYTHT
Trigger: TGTGTGTGTGTACGTGAGGCAGAAGAATATGACAGA...TGCGTATGCGTGTGTGTGTGTGTGTGTGTGTGTACGTGAGGCAGAAGAATATGA
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
CDS-3UTR GCA 90 bp GGTTTGATCTTGAATAATAAGTTAAGACCAAAGAGGGTAAACATGACAGCCATGCTTGGCATGCATGCGTaGGTGCTCGACCCTCATCCA +
Preference number: 4 (lower is better)
Translates to: GLILNNKLRPKRVNMTAMLGMHA*VLDPHP
Trigger: TGGATGAGGGTCGAGCACGCACGCATGCATGCCAAG...CATGGCTGTCATGTTTACCCTCTTTGGTCTTAACTTATTATTCAAGATCAAACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526549.5
ENST00000530655.5
CDS-3UTR TCA 90 bp TTTTATAGATTAGCAGGAACCACTTATAAACCAACCTTGGGGTTGTCTGTACTAAGGGGCAGGCCCTACTaGGCCATATTCCCTAGAAAC +
Preference number: 4 (lower is better)
Translates to: FYRLAGTTYKPTLGLSVLRGRPY*AIFPRN
Trigger: GTTTCTAGGGAATATGGCTCAGTAGGGCCTGCCCCT...TAGTACAGACAACCCCAAGGTTGGTTTATAAGTGGTTCCTGCTAATCTATAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000526549.5
CDS-3UTR CCA 90 bp GTATCCATGGTGCTGATTCTTCCAGTTGTCCCAAAACAAATCTTCAATGAATTCCTAATTGTAGGAGCGTaGGTGCCTCTGCTTCCACTG +
Preference number: 4 (lower is better)
Translates to: VSMVLILPVVPKQIFNEFLIVGA*VPLLPL
Trigger: CAGTGGAAGCAGAGGCACCCACGCTCCTACAATTAG...GAATTCATTGAAGATTTGTTTTGGGACAACTGGAAGAATCAGCACCATGGATAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526549.5
CDS-3UTR GCA 90 bp GGTTTGATCTTGAATAATAAGTTAAGACCAAAGAGGGTAAACATGACAGCCATGTGCTCGACCCTCCATTaGTCTTCTGGAGAGAGATCT +
Preference number: 4 (lower is better)
Translates to: GLILNNKLRPKRVNMTAMCSTLH*SSGERS
Trigger: AGATCTCTCTCCAGAAGAGCAATGGAGGGTCGAGCA...CATGGCTGTCATGTTTACCCTCTTTGGTCTTAACTTATTATTCAAGATCAAACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530058.5
CDS-3UTR GCA 90 bp AAACATGACAGCCATGTAGCCAACAATGCCAGTGGCATAGCTGATTTTATAGATAGAAGAGAAGGGAGATaGCAAAGTCCATGGCATCTT +
Preference number: 4 (lower is better)
Translates to: KHDSHVANNASGIADFIDRREGR*QSPWHL
Trigger: AAGATGCCATGGACTTTGGCATCTCCCTTCTCTTCT...ATCTATAAAATCAGCTATGCCACTGGCATTGTTGGCTACATGGCTGTCATGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000526549.5
ENST00000530058.5
ENST00000530655.5
CDS-3UTR CCA 90 bp TTTTATAGATTAGCAGGAACCACTTATAAACCAACCTTGGGGTTGTCTGTACTAAAACCAAAAATGTCATaGCTCTGCCCCCACCCTGCT +
Preference number: 4 (lower is better)
Translates to: FYRLAGTTYKPTLGLSVLKPKMS*LCPHPA
Trigger: AGCAGGGTGGGGGCAGAGCCATGACATTTTTGGTTT...TAGTACAGACAACCCCAAGGTTGGTTTATAAGTGGTTCCTGCTAATCTATAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 1 transcripts:
ENST00000526549.5
CDS-3UTR GCA 90 bp GTATCCATGGTGCTGATTCTTCCAGTTGTCCCAAAACAAATCTTCAATGAATTCGAACCCTATGGTAGATaGCATGTAGTCTGCACACAT +
Preference number: 4 (lower is better)
Translates to: VSMVLILPVVPKQIFNEFEPYGR*HVVCTH
Trigger: ATGTGTGCAGACTACATGGCATCTACCATAGGGTTC...GAATTCATTGAAGATTTGTTTTGGGACAACTGGAAGAATCAGCACCATGGATAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361756.8
ENST00000526549.5
ENST00000530137.1
CDS-3UTR CAA 90 bp TATCCCTCCCCAGTCCGACACAGCCAGAGGGGTCCTGAGTGGCCCAAGCACCCCCACCCACCACTCCCGTaGTCAGGCCCAGGGAGGACC +
Preference number: 5 (lower is better)
Translates to: YPSPVRHSQRGPEWPKHPHPPLP*SGPGRT
Trigger: GGTCCTCCCTGGGCCTGACAACGGGAGTGGTGGGTG...GGGGTGCTTGGGCCACTCAGGACCCCTCTGGCTGTGTCGGACTGGGGAGGGATA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
CDS GCA 90 bp GCATGCATAGCTTCATGGCCACGGTGCTTGGCATGCATGCGTGCGTaGTCGACCCTCATCCAGCTCCCGTTCCCCAGCAGCACCACCTCC +
Preference number: 5 (lower is better)
Translates to: ACIASWPRCLACMRA*STLIQLPFPSSTTS
Trigger: GGAGGTGGTGCTGCTGGGGAACGGGAGCTGGATGAGGGTCGAGCACGCACGCATGCATGCCAAGCACCGTGGCCATGAAGCTATGCATGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
ENST00000530655.5
ENST00000533380.5
CDS-3UTR CAA 90 bp ACGGGAGTGACAACATCCTGCTTCGTTCTTGCTGCCCTTGAAGGGGCAGGCCCTCACCCACCACTCCCGTaGTCAGGCCCAGGGAGGACC +
Preference number: 5 (lower is better)
Translates to: TGVTTSCFVLAALEGAGPHPPLP*SGPGRT
Trigger: GGTCCTCCCTGGGCCTGACAACGGGAGTGGTGGGTG...AGGGCCTGCCCCTTCAAGGGCAGCAAGAACGAAGCAGGATGTTGTCACTCCCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
CDS-3UTR CAA 90 bp GGCAGGGAGGAGAGTGCCCTGAGGTCCATGGCGTGTGGGGTGGGTTTTCCACTGTCGTTCTTGCTGCCCTaGAAGGGGCAGGCCCTACTG +
Preference number: 5 (lower is better)
Translates to: GREESALRSMACGVGFPLSFLLP*KGQALL
Trigger: CAGTAGGGCCTGCCCCTTCAAGGGCAGCAAGAACGA...CAGTGGAAAACCCACCCCACACGCCATGGACCTCAGGGCACTCTCCTCCCTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
CDS-3UTR CAA 90 bp GGCAGGGAGGAGAGTGCCCTGAGGTCCATGGCGTGTGGGGTGGGTTTTCCACTGCATCCTGCTTCGTTCTaGCTGCCCTTGAAGGGGCAG +
Preference number: 5 (lower is better)
Translates to: GREESALRSMACGVGFPLHPASF*LPLKGQ
Trigger: CTGCCCCTTCAAGGGCAGCAAGAACGAAGCAGGATG...CAGTGGAAAACCCACCCCACACGCCATGGACCTCAGGGCACTCTCCTCCCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
CDS GCA 90 bp TTCAGCATGCATAGCTTCATGGCCACGGTGCTTGGCATGCATGCGTaGGTGCTCGACCCTCATCCAGCTCCCGTTCCCCAGCAGCACCAC +
Preference number: 5 (lower is better)
Translates to: FSMHSFMATVLGMHA*VLDPHPAPVPQQHH
Trigger: GTGGTGCTGCTGGGGAACGGGAGCTGGATGAGGGTCGAGCACGCACGCATGCATGCCAAGCACCGTGGCCATGAAGCTATGCATGCTGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
ENST00000530655.5
ENST00000533380.5
CDS-3UTR CAA 90 bp TATCCCTCCCCAGTCCGACACAGCCAGAGGGGTCCTGAGTGGCCCAAGCACCCCGCAGTAGGGACACGTTaGCTTCTTTCCCACGATGCA +
Preference number: 5 (lower is better)
Translates to: YPSPVRHSQRGPEWPKHPAVGTR*LLSHDA
Trigger: TGCATCGTGGGAAAGAAGCAAACGTGTCCCTACTGC...GGGGTGCTTGGGCCACTCAGGACCCCTCTGGCTGTGTCGGACTGGGGAGGGATA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
ENST00000533380.5
CDS-3UTR CAA 90 bp GTCCGACACAGCCAGAGGGGTCCTGAGTGGCCCAAGCACCCCTTTGAGTCTTTCTCGTTCTTGCTGCCCTaGAAGGGGCAGGCCCTACTG +
Preference number: 5 (lower is better)
Translates to: VRHSQRGPEWPKHPFESFSFLLP*KGQALL
Trigger: CAGTAGGGCCTGCCCCTTCAAGGGCAGCAAGAACGA...GAAAGACTCAAAGGGGTGCTTGGGCCACTCAGGACCCCTCTGGCTGTGTCGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
CDS GCA 90 bp AGGACCATTTCAGCATGCATAGCTTCATGGCCACGGTGCTTGGCATaGATGCGTGCGTGCTCGACCCTCATCCAGCTCCCGTTCCCCAGC +
Preference number: 5 (lower is better)
Translates to: RTISACIASWPRCLA*MRACSTLIQLPFPS
Trigger: GCTGGGGAACGGGAGCTGGATGAGGGTCGAGCACGCACGCATGCATGCCAAGCACCGTGGCCATGAAGCTATGCATGCTGAAATGGTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
ENST00000530655.5
ENST00000533380.5
CDS-3UTR CAA 90 bp GTCCGACACAGCCAGAGGGGTCCTGAGTGGCCCAAGCACCCCTTTGAGTCTTTCGGCCTCTCCCAGGGATaGCTGAACATCCTCTTGAGG +
Preference number: 5 (lower is better)
Translates to: VRHSQRGPEWPKHPFESFGLSQG*LNILLR
Trigger: CCTCAAGAGGATGTTCAGCAATCCCTGGGAGAGGCC...GAAAGACTCAAAGGGGTGCTTGGGCCACTCAGGACCCCTCTGGCTGTGTCGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
ENST00000533380.5
CDS-3UTR CAA 90 bp CTTTGTGGGCAGGGAGGAGAGTGCCCTGAGGTCCATGGCGTGTGGGGTGGGTTTAAGCCAGTCCAGCAGTaGCCCATACATGACGTGAGG +
Preference number: 5 (lower is better)
Translates to: LCGQGGECPEVHGVWGGFKPVQQ*PIHDVR
Trigger: CCTCACGTCATGTATGGGCAACTGCTGGACTGGCTT...AAACCCACCCCACACGCCATGGACCTCAGGGCACTCTCCTCCCTGCCCACAAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000525243.5
ENST00000526549.5
ENST00000530137.1
ENST00000533380.5
CDS-3UTR CAA 90 bp CCATCATATCCCTCCCCAGTCCGACACAGCCAGAGGGGTCCTGAGTGGCCCAAGGCAGTAGGGACACGTTaGCTTCTTTCCCACGATGCA +
Preference number: 5 (lower is better)
Translates to: PSYPSPVRHSQRGPEWPKAVGTR*LLSHDA
Trigger: TGCATCGTGGGAAAGAAGCAAACGTGTCCCTACTGC...CTTGGGCCACTCAGGACCCCTCTGGCTGTGTCGGACTGGGGAGGGATATGATGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
ENST00000533380.5
CDS-3UTR CAA 90 bp GGGCAGGGAGGAGAGTGCCCTGAGGTCCATGGCGTGTGGGGTGGGTTTTCCACTCTGATAAGGTTCCACTaGCCTCAACCAGCCTATAGC +
Preference number: 5 (lower is better)
Translates to: GQGGECPEVHGVWGGFSTLIRFH*PQPAYS
Trigger: GCTATAGGCTGGTTGAGGCAAGTGGAACCTTATCAG...AGTGGAAAACCCACCCCACACGCCATGGACCTCAGGGCACTCTCCTCCCTGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
CDS-3UTR CAA 90 bp CGACACAGCCAGAGGGGTCCTGAGTGGCCCAAGCACCCCTTTGAGTCTTTCCCAGCCCCAAGGCTTCCCTaGTTGGCCAAGTCACTGATA +
Preference number: 5 (lower is better)
Translates to: RHSQRGPEWPKHPFESFPAPRLP*LAKSLI
Trigger: TATCAGTGACTTGGCCAACAAGGGAAGCCTTGGGGC...TGGGAAAGACTCAAAGGGGTGCTTGGGCCACTCAGGACCCCTCTGGCTGTGTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
CDS-3UTR CAA 90 bp AGTGGCCCAAGCACCCCTTTGAGTCTTTCCCACCCAGGAGGTCTTTGTGGGCAGCATCCTGCTTCGTTCTaGCTGCCCTTGAAGGGGCAG +
Preference number: 5 (lower is better)
Translates to: SGPSTPLSLSHPGGLCGQHPASF*LPLKGQ
Trigger: CTGCCCCTTCAAGGGCAGCAAGAACGAAGCAGGATG...CTGCCCACAAAGACCTCCTGGGTGGGAAAGACTCAAAGGGGTGCTTGGGCCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
CDS TCA 90 bp CATGCGTGCGTGCTCGACCCTCCATTGCTCTTCTGGAGAGAGATCTaGCATATCAACCTCATCCAGCTCCCGTTCCCCAGCAGCACCACC +
Preference number: 5 (lower is better)
Translates to: HACVLDPPLLFWREI*HINLIQLPFPSSTT
Trigger: GGTGGTGCTGCTGGGGAACGGGAGCTGGATGAGGTTGATATGTCAGATCTCTCTCCAGAAGAGCAATGGAGGGTCGAGCACGCACGCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000361756.8
ENST00000393711.7
ENST00000490867.5
ENST00000525243.5
ENST00000528683.5
ENST00000530058.5
CDS GCA 90 bp TGGGCCACCACCAAGGTTGCGATGAGGATGAGGACCATTTCAGCATaGATAGCTTCATGGCCACGGTGCTTGGCATGCATGCGTGCGTGC +
Preference number: 5 (lower is better)
Translates to: WATTKVAMRMRTISA*IASWPRCLACMRAC
Trigger: GCACGCACGCATGCATGCCAAGCACCGTGGCCATGAAGCTATGCATGCTGAAATGGTCCTCATCCTCATCGCAACCTTGGTGGTGGCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000361756.8
ENST00000393711.7
ENST00000393713.7
ENST00000490867.5
ENST00000525243.5
ENST00000526549.5
ENST00000526903.1
ENST00000528683.5
ENST00000530058.5
ENST00000530137.1
ENST00000530655.5
ENST00000533380.5
CDS GCA 90 bp CCTCTGCTTCCACTGCACCAGGAGCAGCTGGGCCACCACCAAGGTTaGGATGAGGATGAGGACCATTTCAGCATGCATAGCTTCATGGCC +
Preference number: 5 (lower is better)
Translates to: PLLPLHQEQLGHHQG*DEDEDHFSMHSFMA
Trigger: GGCCATGAAGCTATGCATGCTGAAATGGTCCTCATCCTCATCGCAACCTTGGTGGTGGCCCAGCTGCTCCTGGTGCAGTGGAAGCAGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000361756.8
ENST00000393711.7
ENST00000393713.7
ENST00000490867.5
ENST00000525243.5
ENST00000526549.5
ENST00000526903.1
ENST00000528683.5
ENST00000530058.5
ENST00000530137.1
ENST00000530655.5
ENST00000533380.5
CDS-3UTR CAA 90 bp GGAGAGTGCCCTGAGGTCCATGGCGTGTGGGGTGGGTTTTCCACTGATGCTCTTAAGCCAGTCCAGCAGTaGCCCATACATGACGTGAGG +
Preference number: 5 (lower is better)
Translates to: GECPEVHGVWGGFSTDALKPVQQ*PIHDVR
Trigger: CCTCACGTCATGTATGGGCAACTGCTGGACTGGCTT...AAGAGCATCAGTGGAAAACCCACCCCACACGCCATGGACCTCAGGGCACTCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000525243.5
ENST00000526549.5
ENST00000530137.1
ENST00000533380.5
CDS-3UTR CAA 90 bp GGAGAGTGCCCTGAGGTCCATGGCGTGTGGGGTGGGTTTTCCACTGATGCTCTTGCCCCAAGGCTTCCCTaGTTGGCCAAGTCACTGATA +
Preference number: 5 (lower is better)
Translates to: GECPEVHGVWGGFSTDALAPRLP*LAKSLI
Trigger: TATCAGTGACTTGGCCAACAAGGGAAGCCTTGGGGC...AAGAGCATCAGTGGAAAACCCACCCCACACGCCATGGACCTCAGGGCACTCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
CDS-3UTR CAA 90 bp TACGTGTTCTCAATGATCCCCTCTTCACTGACGTCCACAAAGATCTGCTGCCCACACCCACCACTCCCGTaGTCAGGCCCAGGGAGGACC +
Preference number: 5 (lower is better)
Translates to: YVFSMIPSSLTSTKICCPHPPLP*SGPGRT
Trigger: GGTCCTCCCTGGGCCTGACAACGGGAGTGGTGGGTG...TGGGCAGCAGATCTTTGTGGACGTCAGTGAAGAGGGGATCATTGAGAACACGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526549.5
CDS-3UTR CAA 90 bp CTGAAGGATCCACTGAAGAATGAGCTTGCACAAGGGGCCGTCAGTCATGGCTGCTCGTTCTTGCTGCCCTaGAAGGGGCAGGCCCTACTG +
Preference number: 5 (lower is better)
Translates to: LKDPLKNELAQGAVSHGCSFLLP*KGQALL
Trigger: CAGTAGGGCCTGCCCCTTCAAGGGCAGCAAGAACGA...GCAGCCATGACTGACGGCCCCTTGTGCAAGCTCATTCTTCAGTGGATCCTTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
CDS-3UTR CAA 90 bp TCGAAGCCAGTCCAGCAGTTGCCCATACATGACGTGAGGCCTCTCCCAGGGATTGTGCTCGACCCTCCATaGCTCTTCTGGAGAGAGATC +
Preference number: 5 (lower is better)
Translates to: SKPVQQLPIHDVRPLPGIVLDPP*LFWREI
Trigger: GATCTCTCTCCAGAAGAGCAATGGAGGGTCGAGCAC...AATCCCTGGGAGAGGCCTCACGTCATGTATGGGCAACTGCTGGACTGGCTTCGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525243.5
CDS-3UTR CAA 90 bp GAAGGGGCAGGCCCTACTGAGCCATATTCCCTAGAAACCCAATGCCGAAGGCCCGCAGTAGGGACACGTTaGCTTCTTTCCCACGATGCA +
Preference number: 5 (lower is better)
Translates to: EGAGPTEPYSLETQCRRPAVGTR*LLSHDA
Trigger: TGCATCGTGGGAAAGAAGCAAACGTGTCCCTACTGC...GGGCCTTCGGCATTGGGTTTCTAGGGAATATGGCTCAGTAGGGCCTGCCCCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
CDS-3UTR CAA 90 bp TTCAAGAAGGAAGTGATGTGGCAGAGTGACCGCTGGCACGTGTCACCACTCCACGGCCTCTCCCAGGGATaGCTGAACATCCTCTTGAGG +
Preference number: 5 (lower is better)
Translates to: FKKEVMWQSDRWHVSPLHGLSQG*LNILLR
Trigger: CCTCAAGAGGATGTTCAGCAATCCCTGGGAGAGGCC...GTGGAGTGGTGACACGTGCCAGCGGTCACTCTGCCACATCACTTCCTTCTTGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
CDS-3UTR CAA 90 bp CTGCCAGGCTACCAAGTATCGAAGCCAGTCCAGCAGTTGCCCATACATGACGTGGGCCTCTCCCAGGGATaGCTGAACATCCTCTTGAGG +
Preference number: 5 (lower is better)
Translates to: LPGYQVSKPVQQLPIHDVGLSQG*LNILLR
Trigger: CCTCAAGAGGATGTTCAGCAATCCCTGGGAGAGGCC...CACGTCATGTATGGGCAACTGCTGGACTGGCTTCGATACTTGGTAGCCTGGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393713.7
ENST00000525243.5
ENST00000526549.5
ENST00000530655.5
CDS-3UTR CAA 90 bp CTGAAGGATCCACTGAAGAATGAGCTTGCACAAGGGGCCGTCAGTCATGGCTGCGGCCTCTCCCAGGGATaGCTGAACATCCTCTTGAGG +
Preference number: 5 (lower is better)
Translates to: LKDPLKNELAQGAVSHGCGLSQG*LNILLR
Trigger: CCTCAAGAGGATGTTCAGCAATCCCTGGGAGAGGCC...GCAGCCATGACTGACGGCCCCTTGTGCAAGCTCATTCTTCAGTGGATCCTTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
CDS-3UTR CAA 90 bp ATGATGACAGGCTGCCAGGCTACCAAGTATCGAAGCCAGTCCAGCAGTTGCCCAGGCCTCTCCCAGGGATaGCTGAACATCCTCTTGAGG +
Preference number: 5 (lower is better)
Translates to: MMTGCQATKYRSQSSSCPGLSQG*LNILLR
Trigger: CCTCAAGAGGATGTTCAGCAATCCCTGGGAGAGGCC...TGGGCAACTGCTGGACTGGCTTCGATACTTGGTAGCCTGGCAGCCTGTCATCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393713.7
ENST00000525243.5
ENST00000526549.5
ENST00000530655.5
CDS-3UTR CAA 90 bp AAGCCAGTCCAGCAGTTGCCCATACATGACGTGAGGCCTCTCCCAGGGATTGCTAAGCCAGTCCAGCAGTaGCCCATACATGACGTGAGG +
Preference number: 5 (lower is better)
Translates to: KPVQQLPIHDVRPLPGIAKPVQQ*PIHDVR
Trigger: CCTCACGTCATGTATGGGCAACTGCTGGACTGGCTT...AGCAATCCCTGGGAGAGGCCTCACGTCATGTATGGGCAACTGCTGGACTGGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393713.7
ENST00000525243.5
ENST00000526549.5
ENST00000530655.5
CDS-3UTR CAA 90 bp GGCAGGGAGGAGAGTGCCCTGAGGTCCATGGCGTGTGGGGTGGGTTTTCCACTGGATGTAGTTGATGCCTaGGACTACACCAATGATGAC +
Preference number: 5 (lower is better)
Translates to: GREESALRSMACGVGFPLDVVDA*DYTNDD
Trigger: GTCATCATTGGTGTAGTCCAAGGCATCAACTACATC...CAGTGGAAAACCCACCCCACACGCCATGGACCTCAGGGCACTCTCCTCCCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000525243.5
ENST00000526549.5
ENST00000530137.1
ENST00000533380.5
CDS-3UTR CAA 90 bp ACGGGAGTGACAACATCCTGCTTCGTTCTTGCTGCCCTTGAAGGGGCAGGCCCTCATGGCTGCCAACAATaGCCCCATGGCCCAACTATA +
Preference number: 5 (lower is better)
Translates to: TGVTTSCFVLAALEGAGPHGCQQ*PHGPTI
Trigger: TATAGTTGGGCCATGGGGCAATTGTTGGCAGCCATG...AGGGCCTGCCCCTTCAAGGGCAGCAAGAACGAAGCAGGATGTTGTCACTCCCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
CDS-3UTR CAA 90 bp GGAGGAGAGTGCCCTGAGGTCCATGGCGTGTGGGGTGGGTTTTCCACTGATGCTGCCGAAGGCCCATGTTaGACCTCCCACTTTATTCAA +
Preference number: 5 (lower is better)
Translates to: GGECPEVHGVWGGFSTDAAEGPC*TSHFIQ
Trigger: TTGAATAAAGTGGGAGGTCAAACATGGGCCTTCGGC...AGCATCAGTGGAAAACCCACCCCACACGCCATGGACCTCAGGGCACTCTCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
CDS-3UTR CAA 90 bp CCTTGGACTACACCAATGATGACAGGCTGCCAGGCTACCAAGTATCGAAGCCAGTCGTTCTTGCTGCCCTaGAAGGGGCAGGCCCTACTG +
Preference number: 5 (lower is better)
Translates to: PWTTPMMTGCQATKYRSQSFLLP*KGQALL
Trigger: CAGTAGGGCCTGCCCCTTCAAGGGCAGCAAGAACGA...CTGGCTTCGATACTTGGTAGCCTGGCAGCCTGTCATCATTGGTGTAGTCCAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393713.7
ENST00000526549.5
CDS CCA 90 bp AAGGTTGCGATGAGGATGAGGACCATTTCAGCATGCATAGCTTCATaGCCACGGTGCTTGGCATGCATGCGTGCGTGCTCGACCCTCCAT +
Preference number: 5 (lower is better)
Translates to: KVAMRMRTISACIAS*PRCLACMRACSTLH
Trigger: ATGGAGGGTCGAGCACGCACGCATGCATGCCAAGCACCGTGGCCATGAAGCTATGCATGCTGAAATGGTCCTCATCCTCATCGCAACCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000361756.8
ENST00000393711.7
ENST00000490867.5
ENST00000525243.5
ENST00000526903.1
ENST00000528683.5
ENST00000530058.5
CDS CCA 90 bp AAGGTTGCGATGAGGATGAGGACCATTTCAGCATGCATAGCTTCATaGCCACGGTGCTTGGCATGCATGCGTGCGTGCTCGACCCTCATC +
Preference number: 5 (lower is better)
Translates to: KVAMRMRTISACIAS*PRCLACMRACSTLI
Trigger: GATGAGGGTCGAGCACGCACGCATGCATGCCAAGCACCGTGGCCATGAAGCTATGCATGCTGAAATGGTCCTCATCCTCATCGCAACCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
ENST00000530655.5
ENST00000533380.5
CDS-3UTR CAA 90 bp TGCCCACGGGCGAGTATCCATGGTGCTGATTCTTCCAGTTGTCCCAAAACAAATTCATGGCCACGGTGCTaGGCATGCATGCGTGCGTGC +
Preference number: 5 (lower is better)
Translates to: CPRASIHGADSSSCPKTNSWPRC*ACMRAC
Trigger: GCACGCACGCATGCATGCCAAGCACCGTGGCCATGA...ATTTGTTTTGGGACAACTGGAAGAATCAGCACCATGGATACTCGCCCGTGGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
CDS-3UTR CAA 90 bp AGTGCCCTGAGGTCCATGGCGTGTGGGGTGGGTTTTCCACTGATGCTCTTCATCCTGTCTGAAAGATGTTaGGTAGGCATGCCCGACTCG +
Preference number: 5 (lower is better)
Translates to: SALRSMACGVGFPLMLFILSERC*VGMPDS
Trigger: CGAGTCGGGCATGCCTACCAAACATCTTTCAGACAG...GATGAAGAGCATCAGTGGAAAACCCACCCCACACGCCATGGACCTCAGGGCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361756.8
ENST00000525243.5
ENST00000526549.5
ENST00000530137.1
ENST00000533380.5
CDS-3UTR CAA 90 bp TCATATCCCTCCCCAGTCCGACACAGCCAGAGGGGTCCTGAGTGGCCCAAGCACTTGCTGAACATCCTCTaGAGGTCTACCTTCTCTTTG +
Preference number: 5 (lower is better)
Translates to: SYPSPVRHSQRGPEWPKHLLNIL*RSTFSL
Trigger: CAAAGAGAAGGTAGACCTCAAGAGGATGTTCAGCAA...GTGCTTGGGCCACTCAGGACCCCTCTGGCTGTGTCGGACTGGGGAGGGATATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
ENST00000533380.5
CDS-3UTR CAA 90 bp CAAAACAAATCTTCAATGAATTCTGAGGCCCCAAGGCTTCCCTTGTTGGCCAAGCACCCACCACTCCCGTaGTCAGGCCCAGGGAGGACC +
Preference number: 5 (lower is better)
Translates to: QNKSSMNSEAPRLPLLAKHPPLP*SGPGRT
Trigger: GGTCCTCCCTGGGCCTGACAACGGGAGTGGTGGGTG...CTTGGCCAACAAGGGAAGCCTTGGGGCCTCAGAATTCATTGAAGATTTGTTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
CDS GCA 90 bp ATGAGGATGAGGACCATTTCAGCATGCATAGCTTCATGGCCACGGTaGTTGGCATGCATGCGTGCGTGCTCGACCCTCCATTGCTCTTCT +
Preference number: 5 (lower is better)
Translates to: MRMRTISACIASWPR*LACMRACSTLHCSS
Trigger: AGAAGAGCAATGGAGGGTCGAGCACGCACGCATGCATGCCAAGCACCGTGGCCATGAAGCTATGCATGCTGAAATGGTCCTCATCCTCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000361756.8
ENST00000393711.7
ENST00000490867.5
ENST00000525243.5
ENST00000526903.1
ENST00000528683.5
ENST00000530058.5
CDS-3UTR CAA 90 bp CTGAAGGATCCACTGAAGAATGAGCTTGCACAAGGGGCCGTCAGTCATGGCTGCCTGTCTGAAAGATGTTaGGTAGGCATGCCCGACTCG +
Preference number: 5 (lower is better)
Translates to: LKDPLKNELAQGAVSHGCLSERC*VGMPDS
Trigger: CGAGTCGGGCATGCCTACCAAACATCTTTCAGACAG...GCAGCCATGACTGACGGCCCCTTGTGCAAGCTCATTCTTCAGTGGATCCTTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361756.8
ENST00000526549.5
ENST00000530137.1
CDS-3UTR CAA 90 bp CTGCCAGGCTACCAAGTATCGAAGCCAGTCCAGCAGTTGCCCATACATGACGTGCTGTCTGAAAGATGTTaGGTAGGCATGCCCGACTCG +
Preference number: 5 (lower is better)
Translates to: LPGYQVSKPVQQLPIHDVLSERC*VGMPDS
Trigger: CGAGTCGGGCATGCCTACCAAACATCTTTCAGACAG...CACGTCATGTATGGGCAACTGCTGGACTGGCTTCGATACTTGGTAGCCTGGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525243.5
ENST00000526549.5
ENST00000530655.5
CDS-3UTR CAA 90 bp CCAATGATGACAGGCTGCCAGGCTACCAAGTATCGAAGCCAGTCCAGCAGTTGCCTGTCTGAAAGATGTTaGGTAGGCATGCCCGACTCG +
Preference number: 5 (lower is better)
Translates to: PMMTGCQATKYRSQSSSCLSERC*VGMPDS
Trigger: CGAGTCGGGCATGCCTACCAAACATCTTTCAGACAG...GCAACTGCTGGACTGGCTTCGATACTTGGTAGCCTGGCAGCCTGTCATCATTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525243.5
ENST00000526549.5
ENST00000530655.5
CDS-3UTR CAA 90 bp ACAGCCAGAGGGGTCCTGAGTGGCCCAAGCACCCCTTTGAGTCTTTCCCACCCATTGCTGAACATCCTCTaGAGGTCTACCTTCTCTTTG +
Preference number: 5 (lower is better)
Translates to: TARGVLSGPSTPLSLSHPLLNIL*RSTFSL
Trigger: CAAAGAGAAGGTAGACCTCAAGAGGATGTTCAGCAA...TGGGTGGGAAAGACTCAAAGGGGTGCTTGGGCCACTCAGGACCCCTCTGGCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
ENST00000533380.5
CDS-3UTR CAA 90 bp TCCATGGCGTGTGGGGTGGGTTTTCCACTGATGCTCTTCATCACTATTCCAGGCAAGCCAGTCCAGCAGTaGCCCATACATGACGTGAGG +
Preference number: 5 (lower is better)
Translates to: SMACGVGFPLMLFITIPGKPVQQ*PIHDVR
Trigger: CCTCACGTCATGTATGGGCAACTGCTGGACTGGCTT...GCCTGGAATAGTGATGAAGAGCATCAGTGGAAAACCCACCCCACACGCCATGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393713.7
ENST00000525243.5
ENST00000526549.5
CDS-3UTR CAA 90 bp CAGGGAGGAGAGTGCCCTGAGGTCCATGGCGTGTGGGGTGGGTTTTCCACTGATGATGTAGTTGATGCCTaGGACTACACCAATGATGAC +
Preference number: 5 (lower is better)
Translates to: QGGECPEVHGVWGGFSTDDVVDA*DYTNDD
Trigger: GTCATCATTGGTGTAGTCCAAGGCATCAACTACATC...ATCAGTGGAAAACCCACCCCACACGCCATGGACCTCAGGGCACTCTCCTCCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000525243.5
ENST00000526549.5
ENST00000530137.1
ENST00000533380.5
CDS-3UTR CAA 90 bp AGAGGTTTTCGGGTGGCTCGGAAGGTAACAAAGGCTGTGACAGCAGAGAACAAGGTGCTCGACCCTCCATaGCTCTTCTGGAGAGAGATC +
Preference number: 5 (lower is better)
Translates to: RGFRVARKVTKAVTAENKVLDPP*LFWREI
Trigger: GATCTCTCTCCAGAAGAGCAATGGAGGGTCGAGCAC...CTTGTTCTCTGCTGTCACAGCCTTTGTTACCTTCCGAGCCACCCGAAAACCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393711.7
ENST00000530058.5
CDS-3UTR CAA 90 bp GAGAGTGCCCTGAGGTCCATGGCGTGTGGGGTGGGTTTTCCACTGATGCTCTTCAAACCAACCTTGGGGTaGTCTGTACTAGAGGTTTTC +
Preference number: 5 (lower is better)
Translates to: ESALRSMACGVGFPLMLFKPTLG*SVLEVF
Trigger: GAAAACCTCTAGTACAGACAACCCCAAGGTTGGTTT...GAAGAGCATCAGTGGAAAACCCACCCCACACGCCATGGACCTCAGGGCACTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
CDS-3UTR CAA 90 bp TACCAAGTATCGAAGCCAGTCCAGCAGTTGCCCATACATGACGTGAGGCCTCTCGCAGTAGGGACACGTTaGCTTCTTTCCCACGATGCA +
Preference number: 5 (lower is better)
Translates to: YQVSKPVQQLPIHDVRPLAVGTR*LLSHDA
Trigger: TGCATCGTGGGAAAGAAGCAAACGTGTCCCTACTGC...GAGAGGCCTCACGTCATGTATGGGCAACTGCTGGACTGGCTTCGATACTTGGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393713.7
ENST00000525243.5
ENST00000526549.5
ENST00000530655.5
CDS-3UTR CAA 90 bp GCCAACAATTGCCCCATGGCCCAACTATATGACCTCTATTCTTGGCTGACCACAGGCCTCTCCCAGGGATaGCTGAACATCCTCTTGAGG +
Preference number: 5 (lower is better)
Translates to: ANNCPMAQLYDLYSWLTTGLSQG*LNILLR
Trigger: CCTCAAGAGGATGTTCAGCAATCCCTGGGAGAGGCC...TGTGGTCAGCCAAGAATAGAGGTCATATAGTTGGGCCATGGGGCAATTGTTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
CDS-3UTR CAA 90 bp CACGGATGCAGAACTCGTGGAAGACATGATTGCAGGACAGCCTATACGTGTTCTGGCCTCTCCCAGGGATaGCTGAACATCCTCTTGAGG +
Preference number: 5 (lower is better)
Translates to: HGCRTRGRHDCRTAYTCSGLSQG*LNILLR
Trigger: CCTCAAGAGGATGTTCAGCAATCCCTGGGAGAGGCC...AGAACACGTATAGGCTGTCCTGCAATCATGTCTTCCACGAGTTCTGCATCCGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525243.5
ENST00000526549.5
ENST00000530655.5
CDS-3UTR CAA 90 bp GAGAGTGCCCTGAGGTCCATGGCGTGTGGGGTGGGTTTTCCACTGATGCTCTTCGATGTAGTTGATGCCTaGGACTACACCAATGATGAC +
Preference number: 5 (lower is better)
Translates to: ESALRSMACGVGFPLMLFDVVDA*DYTNDD
Trigger: GTCATCATTGGTGTAGTCCAAGGCATCAACTACATC...GAAGAGCATCAGTGGAAAACCCACCCCACACGCCATGGACCTCAGGGCACTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000525243.5
ENST00000526549.5
ENST00000530137.1
ENST00000533380.5
CDS-3UTR CAA 90 bp CAAGTATCGAAGCCAGTCCAGCAGTTGCCCATACATGACGTGAGGCCTCTCCCACTGATAAGGTTCCACTaGCCTCAACCAGCCTATAGC +
Preference number: 5 (lower is better)
Translates to: QVSKPVQQLPIHDVRPLPLIRFH*PQPAYS
Trigger: GCTATAGGCTGGTTGAGGCAAGTGGAACCTTATCAG...TGGGAGAGGCCTCACGTCATGTATGGGCAACTGCTGGACTGGCTTCGATACTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393713.7
ENST00000526549.5
CDS-3UTR CAA 90 bp CCGTCAGTCATGGCTGCCAACAATTGCCCCATGGCCCAACTATATGACCTCTATGCCCCAAGGCTTCCCTaGTTGGCCAAGTCACTGATA +
Preference number: 5 (lower is better)
Translates to: PSVMAANNCPMAQLYDLYAPRLP*LAKSLI
Trigger: TATCAGTGACTTGGCCAACAAGGGAAGCCTTGGGGC...ATAGAGGTCATATAGTTGGGCCATGGGGCAATTGTTGGCAGCCATGACTGACGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
CDS-3UTR CAA 90 bp ACAGGCTGCCAGGCTACCAAGTATCGAAGCCAGTCCAGCAGTTGCCCATACATGGCCGAAGGCCCATGTTaGACCTCCCACTTTATTCAA +
Preference number: 5 (lower is better)
Translates to: TGCQATKYRSQSSSCPYMAEGPC*TSHFIQ
Trigger: TTGAATAAAGTGGGAGGTCAAACATGGGCCTTCGGC...CATGTATGGGCAACTGCTGGACTGGCTTCGATACTTGGTAGCCTGGCAGCCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393713.7
ENST00000526549.5
CDS-3UTR CAA 90 bp GAAGGGGCAGGCCCTACTGAGCCATATTCCCTAGAAACCCAATGCCGAAGGCCCACTTATAAACCAACCTaGGGGTTGTCTGTACTAGAG +
Preference number: 5 (lower is better)
Translates to: EGAGPTEPYSLETQCRRPTYKPT*GLSVLE
Trigger: CTCTAGTACAGACAACCCCAAGGTTGGTTTATAAGT...GGGCCTTCGGCATTGGGTTTCTAGGGAATATGGCTCAGTAGGGCCTGCCCCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
CDS-3UTR CAA 90 bp CCGTCAGTCATGGCTGCCAACAATTGCCCCATGGCCCAACTATATGACCTCTATGCAGTAGGGACACGTTaGCTTCTTTCCCACGATGCA +
Preference number: 5 (lower is better)
Translates to: PSVMAANNCPMAQLYDLYAVGTR*LLSHDA
Trigger: TGCATCGTGGGAAAGAAGCAAACGTGTCCCTACTGC...ATAGAGGTCATATAGTTGGGCCATGGGGCAATTGTTGGCAGCCATGACTGACGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
CDS-3UTR CAA 90 bp GTAGTTGATGCCTTGGACTACACCAATGATGACAGGCTGCCAGGCTACCAAGTAAAGCCAGTCCAGCAGTaGCCCATACATGACGTGAGG +
Preference number: 5 (lower is better)
Translates to: VVDALDYTNDDRLPGYQVKPVQQ*PIHDVR
Trigger: CCTCACGTCATGTATGGGCAACTGCTGGACTGGCTT...TACTTGGTAGCCTGGCAGCCTGTCATCATTGGTGTAGTCCAAGGCATCAACTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393713.7
ENST00000525243.5
ENST00000526549.5
CDS-3UTR CAA 90 bp GCTTCCCTTGTTGGCCAAGTCACTGATAAGGTTCCACTTGCCTCAACCAGCCTACATGGCTGCCAACAATaGCCCCATGGCCCAACTATA +
Preference number: 5 (lower is better)
Translates to: ASLVGQVTDKVPLASTSLHGCQQ*PHGPTI
Trigger: TATAGTTGGGCCATGGGGCAATTGTTGGCAGCCATG...TAGGCTGGTTGAGGCAAGTGGAACCTTATCAGTGACTTGGCCAACAAGGGAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
CDS-3UTR CAA 90 bp GACAGGCTGCCAGGCTACCAAGTATCGAAGCCAGTCCAGCAGTTGCCCATACATATGGCATCTTCTGGTTaGATCATTGTAGGAGCGTGG +
Preference number: 5 (lower is better)
Translates to: DRLPGYQVSKPVQQLPIHMASSG*IIVGAW
Trigger: CCACGCTCCTACAATGATCAAACCAGAAGATGCCAT...ATGTATGGGCAACTGCTGGACTGGCTTCGATACTTGGTAGCCTGGCAGCCTGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525243.5
CDS-3UTR CAA 90 bp AAATCTTCAATGAATTCTGAGGCCCCAAGGCTTCCCTTGTTGGCCAAGTCACTGGTGCTCGACCCTCCATaGCTCTTCTGGAGAGAGATC +
Preference number: 5 (lower is better)
Translates to: KSSMNSEAPRLPLLAKSLVLDPP*LFWREI
Trigger: GATCTCTCTCCAGAAGAGCAATGGAGGGTCGAGCAC...CAGTGACTTGGCCAACAAGGGAAGCCTTGGGGCCTCAGAATTCATTGAAGATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361756.8
CDS-3UTR CAA 90 bp GTAACAAAGGCTGTGACAGCAGAGAACAAGATCCAGATCACTAGGAACCTCCACGTGCTCGACCCTCCATaGCTCTTCTGGAGAGAGATC +
Preference number: 5 (lower is better)
Translates to: VTKAVTAENKIQITRNLHVLDPP*LFWREI
Trigger: GATCTCTCTCCAGAAGAGCAATGGAGGGTCGAGCAC...GTGGAGGTTCCTAGTGATCTGGATCTTGTTCTCTGCTGTCACAGCCTTTGTTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393711.7
ENST00000530058.5
CDS-3UTR CAA 90 bp CTGAAGGATCCACTGAAGAATGAGCTTGCACAAGGGGCCGTCAGTCATGGCTGCAAACCAACCTTGGGGTaGTCTGTACTAGAGGTTTTC +
Preference number: 5 (lower is better)
Translates to: LKDPLKNELAQGAVSHGCKPTLG*SVLEVF
Trigger: GAAAACCTCTAGTACAGACAACCCCAAGGTTGGTTT...GCAGCCATGACTGACGGCCCCTTGTGCAAGCTCATTCTTCAGTGGATCCTTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
CDS-3UTR CAA 90 bp CTGCCAGGCTACCAAGTATCGAAGCCAGTCCAGCAGTTGCCCATACATGACGTGAAACCAACCTTGGGGTaGTCTGTACTAGAGGTTTTC +
Preference number: 5 (lower is better)
Translates to: LPGYQVSKPVQQLPIHDVKPTLG*SVLEVF
Trigger: GAAAACCTCTAGTACAGACAACCCCAAGGTTGGTTT...CACGTCATGTATGGGCAACTGCTGGACTGGCTTCGATACTTGGTAGCCTGGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393713.7
ENST00000526549.5
CDS-3UTR CAA 90 bp ATGATGACAGGCTGCCAGGCTACCAAGTATCGAAGCCAGTCCAGCAGTTGCCCATTGCTGAACATCCTCTaGAGGTCTACCTTCTCTTTG +
Preference number: 5 (lower is better)
Translates to: MMTGCQATKYRSQSSSCPLLNIL*RSTFSL
Trigger: CAAAGAGAAGGTAGACCTCAAGAGGATGTTCAGCAA...TGGGCAACTGCTGGACTGGCTTCGATACTTGGTAGCCTGGCAGCCTGTCATCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393713.7
ENST00000525243.5
ENST00000526549.5
ENST00000530655.5
CDS-3UTR CAA 90 bp TTCTCGGCCAGAGATGAGAAGGCTCCTTTAAACCAAAAATGTCATGGCTCTGCCAAGCCAGTCCAGCAGTaGCCCATACATGACGTGAGG +
Preference number: 5 (lower is better)
Translates to: FSARDEKAPLNQKCHGSAKPVQQ*PIHDVR
Trigger: CCTCACGTCATGTATGGGCAACTGCTGGACTGGCTT...GGCAGAGCCATGACATTTTTGGTTTAAAGGAGCCTTCTCATCTCTGGCCGAGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
CDS-3UTR CAA 90 bp ACAGGCTGCCAGGCTACCAAGTATCGAAGCCAGTCCAGCAGTTGCCCATACATGGATGTAGTTGATGCCTaGGACTACACCAATGATGAC +
Preference number: 5 (lower is better)
Translates to: TGCQATKYRSQSSSCPYMDVVDA*DYTNDD
Trigger: GTCATCATTGGTGTAGTCCAAGGCATCAACTACATC...CATGTATGGGCAACTGCTGGACTGGCTTCGATACTTGGTAGCCTGGCAGCCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393713.7
ENST00000525243.5
ENST00000526549.5
CDS-3UTR CAA 90 bp CACAAGCCTGAGTACGTTAGCTCTTCTATACTAAGTGCACCAGGCTTGAGCCCCCTGATAAGGTTCCACTaGCCTCAACCAGCCTATAGC +
Preference number: 5 (lower is better)
Translates to: HKPEYVSSSILSAPGLSPLIRFH*PQPAYS
Trigger: GCTATAGGCTGGTTGAGGCAAGTGGAACCTTATCAG...GGGGCTCAAGCCTGGTGCACTTAGTATAGAAGAGCTAACGTACTCAGGCTTGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
CDS-3UTR CAA 90 bp CATATTCTTCTGCCTCACGTACACACACACACACACACACACACGCATACGCACCATGGCTGCCAACAATaGCCCCATGGCCCAACTATA +
Preference number: 5 (lower is better)
Translates to: HILLPHVHTHTHTHTHTHHGCQQ*PHGPTI
Trigger: TATAGTTGGGCCATGGGGCAATTGTTGGCAGCCATG...GTGCGTATGCGTGTGTGTGTGTGTGTGTGTGTGTACGTGAGGCAGAAGAATATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
CDS-3UTR CAA 90 bp AAGGCTCCTTTAAACCAAAAATGTCATGGCTCTGCCCCCACCCTGCTTAGGCAGGCCGAAGGCCCATGTTaGACCTCCCACTTTATTCAA +
Preference number: 5 (lower is better)
Translates to: KAPLNQKCHGSAPTLLRQAEGPC*TSHFIQ
Trigger: TTGAATAAAGTGGGAGGTCAAACATGGGCCTTCGGC...CTGCCTAAGCAGGGTGGGGGCAGAGCCATGACATTTTTGGTTTAAAGGAGCCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
CDS-3UTR CAA 90 bp GCAGAACTCGTGGAAGACATGATTGCAGGACAGCCTATACGTGTTCTCAATGATCATCCTGCTTCGTTCTaGCTGCCCTTGAAGGGGCAG +
Preference number: 5 (lower is better)
Translates to: AELVEDMIAGQPIRVLNDHPASF*LPLKGQ
Trigger: CTGCCCCTTCAAGGGCAGCAAGAACGAAGCAGGATG...ATCATTGAGAACACGTATAGGCTGTCCTGCAATCATGTCTTCCACGAGTTCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526549.5
CDS-3UTR CAA 90 bp CCAGCAGTGTTCTCGGCCAGAGATGAGAAGGCTCCTTTAAACCAAAAATGTCATCATCCTGCTTCGTTCTaGCTGCCCTTGAAGGGGCAG +
Preference number: 5 (lower is better)
Translates to: PAVFSARDEKAPLNQKCHHPASF*LPLKGQ
Trigger: CTGCCCCTTCAAGGGCAGCAAGAACGAAGCAGGATG...ATGACATTTTTGGTTTAAAGGAGCCTTCTCATCTCTGGCCGAGAACACTGCTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
CDS TCA 90 bp GACGTCCACAAAGATCTGCTGCCCACACACAGCACACACACTGTCTaGAAGATGTTTGGTAGGCATGCCCGACTCGCTGTAGAAATTGTA +
Preference number: 5 (lower is better)
Translates to: DVHKDLLPTHSTHTV*KMFGRHARLAVEIV
Trigger: TACAATTTCTACAGCGAGTCGGGCATGCCTACCAAACATCTTTCAGACAGTGTGTGTGCTGTGTGTGGGCAGCAGATCTTTGTGGACGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533380.5
CDS-3UTR CAA 90 bp CAAGTATCGAAGCCAGTCCAGCAGTTGCCCATACATGACGTGAGGCCTCTCCCAACTTATAAACCAACCTaGGGGTTGTCTGTACTAGAG +
Preference number: 5 (lower is better)
Translates to: QVSKPVQQLPIHDVRPLPTYKPT*GLSVLE
Trigger: CTCTAGTACAGACAACCCCAAGGTTGGTTTATAAGT...TGGGAGAGGCCTCACGTCATGTATGGGCAACTGCTGGACTGGCTTCGATACTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393713.7
ENST00000526549.5
CDS-3UTR CAA 90 bp AAATCTTCAATGAATTCTGAGGCCCCAAGGCTTCCCTTGTTGGCCAAGTCACTGCTGTCTGAAAGATGTTaGGTAGGCATGCCCGACTCG +
Preference number: 5 (lower is better)
Translates to: KSSMNSEAPRLPLLAKSLLSERC*VGMPDS
Trigger: CGAGTCGGGCATGCCTACCAAACATCTTTCAGACAG...CAGTGACTTGGCCAACAAGGGAAGCCTTGGGGCCTCAGAATTCATTGAAGATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361756.8
ENST00000526549.5
ENST00000530137.1
CDS-3UTR CAA 90 bp GACATGATTGCAGGACAGCCTATACGTGTTCTCAATGATCCCCTCTTCACTGACGCAGTAGGGACACGTTaGCTTCTTTCCCACGATGCA +
Preference number: 5 (lower is better)
Translates to: DMIAGQPIRVLNDPLFTDAVGTR*LLSHDA
Trigger: TGCATCGTGGGAAAGAAGCAAACGTGTCCCTACTGC...GTCAGTGAAGAGGGGATCATTGAGAACACGTATAGGCTGTCCTGCAATCATGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526549.5
ENST00000530655.5
CDS-3UTR CAA 90 bp TACCAAGTATCGAAGCCAGTCCAGCAGTTGCCCATACATGACGTGAGGCCTCTCTTGCTGAACATCCTCTaGAGGTCTACCTTCTCTTTG +
Preference number: 5 (lower is better)
Translates to: YQVSKPVQQLPIHDVRPLLLNIL*RSTFSL
Trigger: CAAAGAGAAGGTAGACCTCAAGAGGATGTTCAGCAA...GAGAGGCCTCACGTCATGTATGGGCAACTGCTGGACTGGCTTCGATACTTGGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393713.7
ENST00000525243.5
ENST00000526549.5
ENST00000530655.5
CDS-3UTR CAA 90 bp TCCATGGCGTGTGGGGTGGGTTTTCCACTGATGCTCTTCATCACTATTCCAGGCTTGCTGAACATCCTCTaGAGGTCTACCTTCTCTTTG +
Preference number: 5 (lower is better)
Translates to: SMACGVGFPLMLFITIPGLLNIL*RSTFSL
Trigger: CAAAGAGAAGGTAGACCTCAAGAGGATGTTCAGCAA...GCCTGGAATAGTGATGAAGAGCATCAGTGGAAAACCCACCCCACACGCCATGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393713.7
ENST00000525243.5
ENST00000526549.5
CDS-3UTR CAA 90 bp TTCTCAATGATCCCCTCTTCACTGACGTCCACAAAGATCTGCTGCCCACACACACTGATAAGGTTCCACTaGCCTCAACCAGCCTATAGC +
Preference number: 5 (lower is better)
Translates to: FSMIPSSLTSTKICCPHTLIRFH*PQPAYS
Trigger: GCTATAGGCTGGTTGAGGCAAGTGGAACCTTATCAG...TGTGTGTGGGCAGCAGATCTTTGTGGACGTCAGTGAAGAGGGGATCATTGAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526549.5
CDS-3UTR CAA 90 bp GCAGAACTCGTGGAAGACATGATTGCAGGACAGCCTATACGTGTTCTCAATGATGCCCCAAGGCTTCCCTaGTTGGCCAAGTCACTGATA +
Preference number: 5 (lower is better)
Translates to: AELVEDMIAGQPIRVLNDAPRLP*LAKSLI
Trigger: TATCAGTGACTTGGCCAACAAGGGAAGCCTTGGGGC...ATCATTGAGAACACGTATAGGCTGTCCTGCAATCATGTCTTCCACGAGTTCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526549.5
CDS-3UTR CAA 90 bp ACCAACCTTGGGGTTGTCTGTACTAGAGGTTTTCGGGTGGCTCGGAAGGTAACAAAACCAACCTTGGGGTaGTCTGTACTAGAGGTTTTC +
Preference number: 5 (lower is better)
Translates to: TNLGVVCTRGFRVARKVTKPTLG*SVLEVF
Trigger: GAAAACCTCTAGTACAGACAACCCCAAGGTTGGTTT...TGTTACCTTCCGAGCCACCCGAAAACCTCTAGTACAGACAACCCCAAGGTTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 3 transcripts:
ENST00000393711.7
ENST00000526549.5
ENST00000530058.5
CDS-3UTR CAA 90 bp GGGGTTGTCTGTACTAGAGGTTTTCGGGTGGCTCGGAAGGTAACAAAGGCTGTGACTTATAAACCAACCTaGGGGTTGTCTGTACTAGAG +
Preference number: 5 (lower is better)
Translates to: GVVCTRGFRVARKVTKAVTYKPT*GLSVLE
Trigger: CTCTAGTACAGACAACCCCAAGGTTGGTTTATAAGT...CACAGCCTTTGTTACCTTCCGAGCCACCCGAAAACCTCTAGTACAGACAACCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000393711.7
ENST00000526549.5
ENST00000530058.5
CDS-3UTR CAA 90 bp GCAGAACTCGTGGAAGACATGATTGCAGGACAGCCTATACGTGTTCTCAATGATCTGTCTGAAAGATGTTaGGTAGGCATGCCCGACTCG +
Preference number: 5 (lower is better)
Translates to: AELVEDMIAGQPIRVLNDLSERC*VGMPDS
Trigger: CGAGTCGGGCATGCCTACCAAACATCTTTCAGACAG...ATCATTGAGAACACGTATAGGCTGTCCTGCAATCATGTCTTCCACGAGTTCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525243.5
ENST00000526549.5
ENST00000530655.5
CDS-3UTR CAA 90 bp CCAGCAGTGTTCTCGGCCAGAGATGAGAAGGCTCCTTTAAACCAAAAATGTCATCATGGCTGCCAACAATaGCCCCATGGCCCAACTATA +
Preference number: 5 (lower is better)
Translates to: PAVFSARDEKAPLNQKCHHGCQQ*PHGPTI
Trigger: TATAGTTGGGCCATGGGGCAATTGTTGGCAGCCATG...ATGACATTTTTGGTTTAAAGGAGCCTTCTCATCTCTGGCCGAGAACACTGCTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
CDS-3UTR CAA 90 bp GTAACAAAGGCTGTGACAGCAGAGAACAAGATCCAGATCACTAGGAACCTCCACGCCGAAGGCCCATGTTaGACCTCCCACTTTATTCAA +
Preference number: 5 (lower is better)
Translates to: VTKAVTAENKIQITRNLHAEGPC*TSHFIQ
Trigger: TTGAATAAAGTGGGAGGTCAAACATGGGCCTTCGGC...GTGGAGGTTCCTAGTGATCTGGATCTTGTTCTCTGCTGTCACAGCCTTTGTTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526549.5
CDS-3UTR CAA 90 bp AGGTTTTCGGGTGGCTCGGAAGGTAACAAAGGCTGTGACAGCAGAGAACAAGATAAACCAACCTTGGGGTaGTCTGTACTAGAGGTTTTC +
Preference number: 5 (lower is better)
Translates to: RFSGGSEGNKGCDSREQDKPTLG*SVLEVF
Trigger: GAAAACCTCTAGTACAGACAACCCCAAGGTTGGTTT...ATCTTGTTCTCTGCTGTCACAGCCTTTGTTACCTTCCGAGCCACCCGAAAACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000393711.7
ENST00000526549.5
ENST00000530058.5
CDS-3UTR CAA 90 bp GCTTCCCTTGTTGGCCAAGTCACTGATAAGGTTCCACTTGCCTCAACCAGCCTAACTTATAAACCAACCTaGGGGTTGTCTGTACTAGAG +
Preference number: 5 (lower is better)
Translates to: ASLVGQVTDKVPLASTSLTYKPT*GLSVLE
Trigger: CTCTAGTACAGACAACCCCAAGGTTGGTTTATAAGT...TAGGCTGGTTGAGGCAAGTGGAACCTTATCAGTGACTTGGCCAACAAGGGAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
CDS-3UTR CAA 90 bp ACGGATGCAGAACTCGTGGAAGACATGATTGCAGGACAGCCTATACGTGTTCTCTTGCTGAACATCCTCTaGAGGTCTACCTTCTCTTTG +
Preference number: 5 (lower is better)
Translates to: TDAELVEDMIAGQPIRVLLLNIL*RSTFSL
Trigger: CAAAGAGAAGGTAGACCTCAAGAGGATGTTCAGCAA...GAGAACACGTATAGGCTGTCCTGCAATCATGTCTTCCACGAGTTCTGCATCCGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525243.5
ENST00000526549.5
ENST00000530655.5
CDS TCA 90 bp GTAATGTTGGGCAAGTCCCTGTGTCTGAACCTGTTTCCTCACATGTaGAGTAAGGATAATGATCCCTATCTCACAAGACTGTTATGGGGC +
Preference number: 5 (lower is better)
Translates to: VMLGKSLCLNLFPHM*SKDNDPYLTRLLWG
Trigger: GCCCCATAACAGTCTTGTGAGATAGGGATCATTATCCTTACTTCACATGTGAGGAAACAGGTTCAGACACAGGGACTTGCCCAACATTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532379.1
CDS-3UTR CAA 90 bp CGGGCGAGTATCCATGGTGCTGATTCTTCCAGTTGTCCCAAAACAAATCTTCAATTGCTGAACATCCTCTaGAGGTCTACCTTCTCTTTG +
Preference number: 5 (lower is better)
Translates to: RASIHGADSSSCPKTNLQLLNIL*RSTFSL
Trigger: CAAAGAGAAGGTAGACCTCAAGAGGATGTTCAGCAA...TTGAAGATTTGTTTTGGGACAACTGGAAGAATCAGCACCATGGATACTCGCCCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
CDS-3UTR CAA 90 bp GTATCCATGGTGCTGATTCTTCCAGTTGTCCCAAAACAAATCTTCAATGAATTCAAGCCAGTCCAGCAGTaGCCCATACATGACGTGAGG +
Preference number: 5 (lower is better)
Translates to: VSMVLILPVVPKQIFNEFKPVQQ*PIHDVR
Trigger: CCTCACGTCATGTATGGGCAACTGCTGGACTGGCTT...GAATTCATTGAAGATTTGTTTTGGGACAACTGGAAGAATCAGCACCATGGATAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
CDS-3UTR CAA 90 bp CAGTTGTCCCAAAACAAATCTTCAATGAATTCTGAGGCCCCAAGGCTTCCCTTGGATGTAGTTGATGCCTaGGACTACACCAATGATGAC +
Preference number: 5 (lower is better)
Translates to: QLSQNKSSMNSEAPRLPLDVVDA*DYTNDD
Trigger: GTCATCATTGGTGTAGTCCAAGGCATCAACTACATC...CAAGGGAAGCCTTGGGGCCTCAGAATTCATTGAAGATTTGTTTTGGGACAACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
CDS-3UTR CAA 90 bp GGGCGAGTATCCATGGTGCTGATTCTTCCAGTTGTCCCAAAACAAATCTTCAATACTTATAAACCAACCTaGGGGTTGTCTGTACTAGAG +
Preference number: 5 (lower is better)
Translates to: GRVSMVLILPVVPKQIFNTYKPT*GLSVLE
Trigger: CTCTAGTACAGACAACCCCAAGGTTGGTTTATAAGT...ATTGAAGATTTGTTTTGGGACAACTGGAAGAATCAGCACCATGGATACTCGCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
CDS-3UTR CAA 90 bp GTATCCATGGTGCTGATTCTTCCAGTTGTCCCAAAACAAATCTTCAATGAATTCGATGTAGTTGATGCCTaGGACTACACCAATGATGAC +
Preference number: 5 (lower is better)
Translates to: VSMVLILPVVPKQIFNEFDVVDA*DYTNDD
Trigger: GTCATCATTGGTGTAGTCCAAGGCATCAACTACATC...GAATTCATTGAAGATTTGTTTTGGGACAACTGGAAGAATCAGCACCATGGATAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361756.8
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
CDS-3UTR CAA 90 bp GGTTTGATCTTGAATAATAAGTTAAGACCAAAGAGGGTAAACATGACAGCCATGACTTATAAACCAACCTaGGGGTTGTCTGTACTAGAG +
Preference number: 5 (lower is better)
Translates to: GLILNNKLRPKRVNMTAMTYKPT*GLSVLE
Trigger: CTCTAGTACAGACAACCCCAAGGTTGGTTTATAAGT...CATGGCTGTCATGTTTACCCTCTTTGGTCTTAACTTATTATTCAAGATCAAACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526549.5
ENST00000530058.5
CDS GCA 72 bp GCTTCATGGCCACGGTGCTTGGCATGCATGCGTGCGTaGTCGACCCTCATCCAGCTCCCGTTCCCCAGCAGC +
Preference number: 6 (lower is better)
Translates to: ASWPRCLACMRA*STLIQLPFPSS
Trigger: GCTGCTGGGGAACGGGAGCTGGATGAGGGTCGAGCACGCACGCATGCATGCCAAGCACCGTGGCCATGAAGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
ENST00000530655.5
ENST00000533380.5
CDS GCA 72 bp CATAGCTTCATGGCCACGGTGCTTGGCATGCATGCGTaGGTGCTCGACCCTCATCCAGCTCCCGTTCCCCAG +
Preference number: 6 (lower is better)
Translates to: HSFMATVLGMHA*VLDPHPAPVPQ
Trigger: CTGGGGAACGGGAGCTGGATGAGGGTCGAGCACGCACGCATGCATGCCAAGCACCGTGGCCATGAAGCTATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
ENST00000530655.5
ENST00000533380.5
CDS GCA 72 bp TCAGCATGCATAGCTTCATGGCCACGGTGCTTGGCATaGATGCGTGCGTGCTCGACCCTCATCCAGCTCCCG +
Preference number: 6 (lower is better)
Translates to: SACIASWPRCLA*MRACSTLIQLP
Trigger: CGGGAGCTGGATGAGGGTCGAGCACGCACGCATGCATGCCAAGCACCGTGGCCATGAAGCTATGCATGCTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
ENST00000530655.5
ENST00000533380.5
CDS CAA 90 bp AGGATGAGGACCATTTCAGCATGCATAGCTTCATGGCCACGGTGCTaGGCATGCATGCGTGCGTGCTCGACCCTCATCCAGCTCCCGTTC +
Preference number: 6 (lower is better)
Translates to: RMRTISACIASWPRC*ACMRACSTLIQLPF
Trigger: GAACGGGAGCTGGATGAGGGTCGAGCACGCACGCATGCATGCCAAGCACCGTGGCCATGAAGCTATGCATGCTGAAATGGTCCTCATCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
ENST00000530655.5
ENST00000533380.5
CDS GCA 72 bp CATAGCTTCATGGCCACGGTGCTTGGCATGCATGCGTaGGTGCTCGACCCTCCATTGCTCTTCTGGAGAGAG +
Preference number: 6 (lower is better)
Translates to: HSFMATVLGMHA*VLDPPLLFWRE
Trigger: CTCTCTCCAGAAGAGCAATGGAGGGTCGAGCACGCACGCATGCATGCCAAGCACCGTGGCCATGAAGCTATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000361756.8
ENST00000393711.7
ENST00000490867.5
ENST00000525243.5
ENST00000526903.1
ENST00000528683.5
ENST00000530058.5
CDS GCA 72 bp TCAGCATGCATAGCTTCATGGCCACGGTGCTTGGCATaGATGCGTGCGTGCTCGACCCTCCATTGCTCTTCT +
Preference number: 6 (lower is better)
Translates to: SACIASWPRCLA*MRACSTLHCSS
Trigger: AGAAGAGCAATGGAGGGTCGAGCACGCACGCATGCATGCCAAGCACCGTGGCCATGAAGCTATGCATGCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000361756.8
ENST00000393711.7
ENST00000490867.5
ENST00000525243.5
ENST00000526903.1
ENST00000528683.5
ENST00000530058.5
CDS GCA 72 bp AGGACCATTTCAGCATGCATAGCTTCATGGCCACGGTaGTTGGCATGCATGCGTGCGTGCTCGACCCTCCAT +
Preference number: 6 (lower is better)
Translates to: RTISACIASWPR*LACMRACSTLH
Trigger: ATGGAGGGTCGAGCACGCACGCATGCATGCCAAGCACCGTGGCCATGAAGCTATGCATGCTGAAATGGTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000361756.8
ENST00000393711.7
ENST00000490867.5
ENST00000525243.5
ENST00000526903.1
ENST00000528683.5
ENST00000530058.5
CDS GCA 72 bp AGGACCATTTCAGCATGCATAGCTTCATGGCCACGGTaGTTGGCATGCATGCGTGCGTGCTCGACCCTCATC +
Preference number: 6 (lower is better)
Translates to: RTISACIASWPR*LACMRACSTLI
Trigger: GATGAGGGTCGAGCACGCACGCATGCATGCCAAGCACCGTGGCCATGAAGCTATGCATGCTGAAATGGTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
ENST00000530655.5
ENST00000533380.5
CDS CAA 72 bp ACCATTTCAGCATGCATAGCTTCATGGCCACGGTGCTaGGCATGCATGCGTGCGTGCTCGACCCTCCATTGC +
Preference number: 6 (lower is better)
Translates to: TISACIASWPRC*ACMRACSTLHC
Trigger: GCAATGGAGGGTCGAGCACGCACGCATGCATGCCAAGCACCGTGGCCATGAAGCTATGCATGCTGAAATGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000361756.8
ENST00000393711.7
ENST00000490867.5
ENST00000525243.5
ENST00000526903.1
ENST00000528683.5
ENST00000530058.5
CDS CAA 72 bp ACCATTTCAGCATGCATAGCTTCATGGCCACGGTGCTaGGCATGCATGCGTGCGTGCTCGACCCTCATCCAG +
Preference number: 6 (lower is better)
Translates to: TISACIASWPRC*ACMRACSTLIQ
Trigger: CTGGATGAGGGTCGAGCACGCACGCATGCATGCCAAGCACCGTGGCCATGAAGCTATGCATGCTGAAATGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000393713.7
ENST00000526549.5
ENST00000530137.1
ENST00000530655.5
ENST00000533380.5
CDS CAA 90 bp AGGATGAGGACCATTTCAGCATGCATAGCTTCATGGCCACGGTGCTaGGCATGCATGCGTGCGTGCTCGACCCTCCATTGCTCTTCTGGA +
Preference number: 6 (lower is better)
Translates to: RMRTISACIASWPRC*ACMRACSTLHCSSG
Trigger: TCCAGAAGAGCAATGGAGGGTCGAGCACGCACGCATGCATGCCAAGCACCGTGGCCATGAAGCTATGCATGCTGAAATGGTCCTCATCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000361756.8
ENST00000393711.7
ENST00000490867.5
ENST00000525243.5
ENST00000526903.1
ENST00000528683.5
ENST00000530058.5
CDS TCA 72 bp GTGCTCGACCCTCCATTGCTCTTCTGGAGAGAGATCTaGCATATCAACCTCATCCAGCTCCCGTTCCCCAGC +
Preference number: 6 (lower is better)
Translates to: VLDPPLLFWREI*HINLIQLPFPS
Trigger: GCTGGGGAACGGGAGCTGGATGAGGTTGATATGTCAGATCTCTCTCCAGAAGAGCAATGGAGGGTCGAGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000361756.8
ENST00000393711.7
ENST00000490867.5
ENST00000525243.5
ENST00000528683.5
ENST00000530058.5
CDS CCA 72 bp ATGAGGATGAGGACCATTTCAGCATGCATAGCTTCATaGCCACGGTGCTTGGCATGCATGCGTGCGTGCTCG +
Preference number: 6 (lower is better)
Translates to: MRMRTISACIAS*PRCLACMRACS
Trigger: CGAGCACGCACGCATGCATGCCAAGCACCGTGGCCATGAAGCTATGCATGCTGAAATGGTCCTCATCCTCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000361756.8
ENST00000393711.7
ENST00000393713.7
ENST00000490867.5
ENST00000525243.5
ENST00000526549.5
ENST00000526903.1
ENST00000528683.5
ENST00000530058.5
ENST00000530137.1
ENST00000530655.5
ENST00000533380.5
CDS TCA 72 bp AAGGTCAGGAGATCGAGACCATCCTGGCTAACACAGTaGAACCCCGTCTCTAATTGTAGGAGCGTGGGTGCC +
Preference number: 6 (lower is better)
Translates to: KVRRSRPSWLTQ*NPVSNCRSVGA
Trigger: GGCACCCACGCTCCTACAATTAGAGACGGGGTTTCACTGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000490867.5
ENST00000526549.5
CDS TCA 72 bp TTCTTGTCCATCTCCTCCATTAAACAGAGTACTCCTTaGGGGCAGGGACCATGTCTTATCCAGCTCTGTATC +
Preference number: 6 (lower is better)
Translates to: FLSISSIKQSTP*GQGPCLIQLCI
Trigger: GATACAGAGCTGGATAAGACATGGTCCCTGCCCTCAAGGAGTACTCTGTTTAATGGAGGAGATGGACAAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525176.1
CDS TCA 72 bp GGCAAGTCCCTGTGTCTGAACCTGTTTCCTCACATGTaGAGTAAGGATAATGATCCCTATCTCACAAGACTG +
Preference number: 6 (lower is better)
Translates to: GKSLCLNLFPHM*SKDNDPYLTRL
Trigger: CAGTCTTGTGAGATAGGGATCATTATCCTTACTTCACATGTGAGGAAACAGGTTCAGACACAGGGACTTGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532379.1