RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RNF10 (Homo sapiens)

Ensembl gene IDs: ENSG00000022840

Ensembl transcript IDs: ENST00000325954.9, ENST00000366112.6, ENST00000413266.6, ENST00000535395.1, ENST00000535417.1, ENST00000535470.5, ENST00000536869.5, ENST00000537376.1, ENST00000537740.1, ENST00000537997.1, ENST00000538254.1, ENST00000538796.5, ENST00000539486.1, ENST00000540046.5, ENST00000542207.5, ENST00000542438.1, ENST00000542701.1, ENST00000543578.1, ENST00000543675.5, ENST00000544124.1, ENST00000545419.5, ENST00000546262.6, ENST00000551139.6

Found 343 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CAGATGGCCCTGCTCTCCTGCAGCTGTACCAGACTCCTCCTCCTATaGCTCAAGCCAGTCACTGAAAACAAGCTCGATCTTAGGGGTAGC +
Preference number: 1 (lower is better)
Translates to: QMALLSCSCTRLLLL*LKPVTENKLDLRGS
Trigger: GCTACCCCTAAGATCGAGCTTGTTTTCAGTGACTGGCTTGAGTCATAGGAGGAGGAGTCTGGTACAGCTGCAGGAGAGCAGGGCCATCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325954.9
3UTR GCA 90 bp AGCCATGCTCAAGAAGAGGCAAAACCCTCCTTTCACACATGCAAGTaGCAAGGACAGCCTACTCCATTAAGCTGGCACCACAGCCTGGCC +
Preference number: 1 (lower is better)
Translates to: SHAQEEAKPSFHTCK*QGQPTPLSWHHSLA
Trigger: GGCCAGGCTGTGGTGCCAGCTTAATGGAGTAGGCTGTCCTTGGCACTTGCATGTGTGAAAGGAGGGTTTTGCCTCTTCTTGAGCATGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325954.9
3UTR GCA 90 bp CTGAGTCCAGGAAGCCCTGACATGATGCTACAGCAGAGCAGTGTGTaGCATTCTGGGTTGGACTGCTCTAATGCATCTCAAAGGGGACTC +
Preference number: 1 (lower is better)
Translates to: LSPGSPDMMLQQSSV*HSGLDCSNASQRGL
Trigger: GAGTCCCCTTTGAGATGCATTAGAGCAGTCCAACCCAGAATGGCACACACTGCTCTGCTGTAGCATCATGTCAGGGCTTCCTGGACTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325954.9
3UTR GCA 90 bp AACTCAAGCCATGCTCAAGAAGAGGCAAAACCCTCCTTTCACACATaGAAGTGCCAAGGACAGCCTACTCCATTAAGCTGGCACCACAGC +
Preference number: 1 (lower is better)
Translates to: NSSHAQEEAKPSFHT*KCQGQPTPLSWHHS
Trigger: GCTGTGGTGCCAGCTTAATGGAGTAGGCTGTCCTTGGCACTTGCATGTGTGAAAGGAGGGTTTTGCCTCTTCTTGAGCATGGCTTGAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325954.9
3UTR GCA 90 bp GATGCATGCCCAGCAGAAGATGTGTCCACAACGGGTTATCTTGGCTaGAGTAGGTGGATAGAGGCATATTGGGCAAGATGGCACTTCATG +
Preference number: 1 (lower is better)
Translates to: DACPAEDVSTTGYLG*SRWIEAYWARWHFM
Trigger: CATGAAGTGCCATCTTGCCCAATATGCCTCTATCCACCTACTGCAGCCAAGATAACCCGTTGTGGACACATCTTCTGCTGGGCATGCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536869.5
ENST00000538796.5
3UTR CCA 90 bp TCCACAACGGGTTATCTTGGCTGCAGTAGGTGGATAGAGGCATATTaGGCAAGATGGCACTTCATGGCTACAAATGCGCACTTGTTCCAC +
Preference number: 1 (lower is better)
Translates to: STTGYLGCSRWIEAY*ARWHFMATNAHLFH
Trigger: GTGGAACAAGTGCGCATTTGTAGCCATGAAGTGCCATCTTGCCCAATATGCCTCTATCCACCTACTGCAGCCAAGATAACCCGTTGTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536869.5
ENST00000538796.5
3UTR TCA 90 bp CTGAAAACAAGCTCGATCTTAGGGGTAGCAGGTCTCAGGGCTTCGTaGGTTACAGCTTTCCTTACCAACTCAAGCCATGCTCAAGAAGAG +
Preference number: 1 (lower is better)
Translates to: LKTSSILGVAGLRAS*VTAFLTNSSHAQEE
Trigger: CTCTTCTTGAGCATGGCTTGAGTTGGTAAGGAAAGCTGTAACTCACGAAGCCCTGAGACCTGCTACCCCTAAGATCGAGCTTGTTTTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325954.9
3UTR GCA 90 bp TCTCAGGGCTTCGTGAGTTACAGCTTTCCTTACCAACTCAAGCCATaGTCAAGAAGAGGCAAAACCCTCCTTTCACACATGCAAGTGCCA +
Preference number: 1 (lower is better)
Translates to: SQGFVSYSFPYQLKP*SRRGKTLLSHMQVP
Trigger: TGGCACTTGCATGTGTGAAAGGAGGGTTTTGCCTCTTCTTGAGCATGGCTTGAGTTGGTAAGGAAAGCTGTAACTCACGAAGCCCTGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325954.9
3UTR CCA 90 bp GGTTATCTTGGCTGCAGTAGGTGGATAGAGGCATATTGGGCAAGATaGCACTTCATGGCTACAAATGCGCACTTGTTCCACAAAGTCCCA +
Preference number: 1 (lower is better)
Translates to: GYLGCSRWIEAYWAR*HFMATNAHLFHKVP
Trigger: TGGGACTTTGTGGAACAAGTGCGCATTTGTAGCCATGAAGTGCCATCTTGCCCAATATGCCTCTATCCACCTACTGCAGCCAAGATAACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536869.5
ENST00000538796.5
3UTR CCA 90 bp CCAGCAGAAGATGTGTCCACAACGGGTTATCTTGGCTGCAGTAGGTaGATAGAGGCATATTGGGCAAGATGGCACTTCATGGCTACAAAT +
Preference number: 1 (lower is better)
Translates to: PAEDVSTTGYLGCSR*IEAYWARWHFMATN
Trigger: ATTTGTAGCCATGAAGTGCCATCTTGCCCAATATGCCTCTATCCACCTACTGCAGCCAAGATAACCCGTTGTGGACACATCTTCTGCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536869.5
ENST00000538796.5
3UTR TCA 90 bp AGAACTGTAACAGATGGGACATTTACTCCACGTCTTCTCACTCAGTaGAAGATAGTGCAGGATGCATGCCCAGCAGAAGATGTGTCCACA +
Preference number: 1 (lower is better)
Translates to: RTVTDGTFTPRLLTQ*KIVQDACPAEDVST
Trigger: TGTGGACACATCTTCTGCTGGGCATGCATCCTGCACTATCTTTCACTGAGTGAGAAGACGTGGAGTAAATGTCCCATCTGTTACAGTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536869.5
ENST00000538796.5
3UTR TCA 90 bp TCCCTCTTCATCAGCTGCATCGTAATGGTATCACCAACAACATACTaGTGTGACTCTGTGGCAACAACACTCTTGAGATCCTTCTTATGC +
Preference number: 1 (lower is better)
Translates to: SLFISCIVMVSPTTY*CDSVATTLLRSFLC
Trigger: GCATAAGAAGGATCTCAAGAGTGTTGTTGCCACAGAGTCACATCAGTATGTTGTTGGTGATACCATTACGATGCAGCTGATGAAGAGGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536869.5
3UTR-3UTR TCA 90 bp CAGGATGCATGCCCAGCAGAAGATGTGTCCACAACGGGTTATCTTGGCTGCAGTAGTCTTGCTTTTCTGTaGACTGGAGCGACGGGACTG +
Preference number: 2 (lower is better)
Translates to: QDACPAEDVSTTGYLGCSSLAFL*TGATGL
Trigger: CAGTCCCGTCGCTCCAGTTCACAGAAAAGCAAGACT...ACTGCAGCCAAGATAACCCGTTGTGGACACATCTTCTGCTGGGCATGCATCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538796.5
3UTR-3UTR CCA 90 bp CCTGCTCTCCTGCAGCTGTACCAGACTCCTCCTCCTATGACTCAAGCCAGTCACTGTGCCATTCTGGGTTaGACTGCTCTAATGCATCTC +
Preference number: 2 (lower is better)
Translates to: PALLQLYQTPPPMTQASHCAILG*TALMHL
Trigger: GAGATGCATTAGAGCAGTCCAACCCAGAATGGCACA...GTGACTGGCTTGAGTCATAGGAGGAGGAGTCTGGTACAGCTGCAGGAGAGCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325954.9
3UTR-3UTR TCA 90 bp AAGAGGCAAAACCCTCCTTTCACACATGCAAGTGCCAAGGACAGCCTACTCCATGAGTCCAGGAAGCCCTaGCATGATGCTACAGCAGAG +
Preference number: 2 (lower is better)
Translates to: KRQNPPFTHASAKDSLLHESRKP*HDATAE
Trigger: CTCTGCTGTAGCATCATGTCAGGGCTTCCTGGACTC...ATGGAGTAGGCTGTCCTTGGCACTTGCATGTGTGAAAGGAGGGTTTTGCCTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325954.9
3UTR-3UTR TCA 90 bp TCTCACTCAGTGAAAGATAGTGCAGGATGCATGCCCAGCAGAAGATGTGTCCACCTAAACTCTGCCCGTTaGGCCTCTGCTACCTCATCT +
Preference number: 2 (lower is better)
Translates to: SHSVKDSAGCMPSRRCVHLNSAR*ASATSS
Trigger: AGATGAGGTAGCAGAGGCTCAACGGGCAGAGTTTAG...GTGGACACATCTTCTGCTGGGCATGCATCCTGCACTATCTTTCACTGAGTGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538796.5
3UTR-3UTR TCA 90 bp CAGAACTGTAACAGATGGGACATTTACTCCACGTCTTCTCACTCAGTGAAAGATCCACTGCCTTCAAAGTaGCCCGTCTGGCCACGGGGT +
Preference number: 2 (lower is better)
Translates to: QNCNRWDIYSTSSHSVKDPLPSK*PVWPRG
Trigger: ACCCCGTGGCCAGACGGGTCACTTTGAAGGCAGTGG...ATCTTTCACTGAGTGAGAAGACGTGGAGTAAATGTCCCATCTGTTACAGTTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538796.5
3UTR-3UTR GCA 90 bp GAGCTGTGTAGTCTTGGTCTTCAGACACCACAAATTGGCAGTTGGCCTGTAAAAGGCAGGGCTAAACTCTaGCCGTTGAGCCTCTGCTAC +
Preference number: 2 (lower is better)
Translates to: ELCSLGLQTPQIGSWPVKGRAKL*PLSLCY
Trigger: GTAGCAGAGGCTCAACGGGCAGAGTTTAGCCCTGCC...TTTTACAGGCCAACTGCCAATTTGTGGTGTCTGAAGACCAAGACTACACAGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538796.5
3UTR-3UTR CCA 90 bp AGAGAACTGGGCAGGGCTAAACTCTGCCCGTTGAGCCTCTGCTACCTCATCTCGTGCGATTATAACGCTTaGATCCACTGGAGTTCTTTC +
Preference number: 2 (lower is better)
Translates to: RELGRAKLCPLSLCYLISCDYNA*IHWSSF
Trigger: GAAAGAACTCCAGTGGATCCAAGCGTTATAATCGCA...CGAGATGAGGTAGCAGAGGCTCAACGGGCAGAGTTTAGCCCTGCCCAGTTCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538796.5
3UTR-3UTR CCA 90 bp CAGGATGCATGCCCAGCAGAAGATGTGTCCACAACGGGTTATCTTGGCTGCAGTCAAGATGGCACTTCATaGCTACAAATGCGCACTTGT +
Preference number: 2 (lower is better)
Translates to: QDACPAEDVSTTGYLGCSQDGTS*LQMRTC
Trigger: ACAAGTGCGCATTTGTAGCCATGAAGTGCCATCTTG...ACTGCAGCCAAGATAACCCGTTGTGGACACATCTTCTGCTGGGCATGCATCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536869.5
ENST00000538796.5
3UTR-3UTR CCA 90 bp GTGAAAGATAGTGCAGGATGCATGCCCAGCAGAAGATGTGTCCACAACGGGTTACTTGGCTGCAGTAGGTaGATAGAGGCATATTGGGCA +
Preference number: 2 (lower is better)
Translates to: VKDSAGCMPSRRCVHNGLLGCSR*IEAYWA
Trigger: TGCCCAATATGCCTCTATCCACCTACTGCAGCCAAG...TAACCCGTTGTGGACACATCTTCTGCTGGGCATGCATCCTGCACTATCTTTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536869.5
ENST00000538796.5
3UTR CAA 90 bp AGCCCTGACATGATGCTACAGCAGAGCAGTGTGTGCCATTCTGGGTaGGACTGCTCTAATGCATCTCAAAGGGGACTCAATCTTACTTTG +
Preference number: 2 (lower is better)
Translates to: SPDMMLQQSSVCHSG*DCSNASQRGLNLTL
Trigger: CAAAGTAAGATTGAGTCCCCTTTGAGATGCATTAGAGCAGTCCAACCCAGAATGGCACACACTGCTCTGCTGTAGCATCATGTCAGGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325954.9
3UTR-3UTR TCA 90 bp TTGAGCCTCTGCTACCTCATCTCGTCTTCCACCATTAAAAGAAGAGCTAAAGAGCTGCCGCCGCCCCTTTaGGGAGGCATCTTGTTAAAA +
Preference number: 2 (lower is better)
Translates to: LSLCYLISSSTIKRRAKELPPPL*GGILLK
Trigger: TTTTAACAAGATGCCTCCTCAAAGGGGCGGCGGCAG...CTCTTTAGCTCTTCTTTTAATGGTGGAAGACGAGATGAGGTAGCAGAGGCTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000538796.5
3UTR-3UTR GCA 90 bp GACTCAAGCCAGTCACTGAAAACAAGCTCGATCTTAGGGGTAGCAGGTCTCAGGTACCAACTCAAGCCATaGTCAAGAAGAGGCAAAACC +
Preference number: 2 (lower is better)
Translates to: DSSQSLKTSSILGVAGLRYQLKP*SRRGKT
Trigger: GGTTTTGCCTCTTCTTGAGCATGGCTTGAGTTGGTA...CCTGAGACCTGCTACCCCTAAGATCGAGCTTGTTTTCAGTGACTGGCTTGAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000325954.9
3UTR-3UTR GCA 90 bp AAGAGGCAAAACCCTCCTTTCACACATGCAAGTGCCAAGGACAGCCTACTCCATCATTCTGGGTTGGACTaGTCTAATGCATCTCAAAGG +
Preference number: 2 (lower is better)
Translates to: KRQNPPFTHASAKDSLLHHSGLD*SNASQR
Trigger: CCTTTGAGATGCATTAGAGCAGTCCAACCCAGAATG...ATGGAGTAGGCTGTCCTTGGCACTTGCATGTGTGAAAGGAGGGTTTTGCCTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325954.9
3UTR-3UTR GCA 90 bp CATCAAATTCAGCTCAAACCAAGGCATAAGAAAACTGCTCTAGATGAGAGGGAGCAGCAGAGCAGTGTGTaGCATTCTGGGTTGGACTGC +
Preference number: 2 (lower is better)
Translates to: HQIQLKPRHKKTALDEREQQSSV*HSGLDC
Trigger: GCAGTCCAACCCAGAATGGCACACACTGCTCTGCTG...CTCCCTCTCATCTAGAGCAGTTTTCTTATGCCTTGGTTTGAGCTGAATTTGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325954.9
3UTR-3UTR CCA 90 bp CACTCAGTGAAAGATAGTGCAGGATGCATGCCCAGCAGAAGATGTGTCCACAACGCATATTGGGCAAGATaGCACTTCATGGCTACAAAT +
Preference number: 2 (lower is better)
Translates to: HSVKDSAGCMPSRRCVHNAYWAR*HFMATN
Trigger: ATTTGTAGCCATGAAGTGCCATCTTGCCCAATATGC...GTTGTGGACACATCTTCTGCTGGGCATGCATCCTGCACTATCTTTCACTGAGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536869.5
ENST00000538796.5
3UTR-3UTR CCA 90 bp CAGAACTGTAACAGATGGGACATTTACTCCACGTCTTCTCACTCAGTGAAAGATTTAGGACCAGAGAACTaGGCAGGGCTAAACTCTGCC +
Preference number: 2 (lower is better)
Translates to: QNCNRWDIYSTSSHSVKDLGPEN*AGLNSA
Trigger: GGCAGAGTTTAGCCCTGCCCAGTTCTCTGGTCCTAA...ATCTTTCACTGAGTGAGAAGACGTGGAGTAAATGTCCCATCTGTTACAGTTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538796.5
3UTR-3UTR TCA 90 bp CATCAAATTCAGCTCAAACCAAGGCATAAGAAAACTGCTCTAGATGAGAGGGAGAGACTAAACTGGCAATaGACTAAAAACCTTGGCAGG +
Preference number: 2 (lower is better)
Translates to: HQIQLKPRHKKTALDERERLNWQ*TKNLGR
Trigger: CCTGCCAAGGTTTTTAGTTCATTGCCAGTTTAGTCT...CTCCCTCTCATCTAGAGCAGTTTTCTTATGCCTTGGTTTGAGCTGAATTTGATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325954.9
3UTR-3UTR CCA 90 bp CAGAACTGTAACAGATGGGACATTTACTCCACGTCTTCTCACTCAGTGAAAGATCAGAACTGTAACAGATaGGACATTTACTCCACGTCT +
Preference number: 2 (lower is better)
Translates to: QNCNRWDIYSTSSHSVKDQNCNR*DIYSTS
Trigger: AGACGTGGAGTAAATGTCCCATCTGTTACAGTTCTG...ATCTTTCACTGAGTGAGAAGACGTGGAGTAAATGTCCCATCTGTTACAGTTCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536869.5
ENST00000538796.5
3UTR-3UTR GCA 90 bp GGTTCAAAAGTGAAATTCAACAAGTGGTTCAGGTTGATCTTCTTAGGACCAGAGAGGAAAGTTCACGTTTaGGATTATAACGCTTGGATC +
Preference number: 2 (lower is better)
Translates to: GSKVKFNKWFRLIFLGPERKVHV*DYNAWI
Trigger: GATCCAAGCGTTATAATCGCAAACGTGAACTTTCCT...CTCTGGTCCTAAGAAGATCAACCTGAACCACTTGTTGAATTTCACTTTTGAACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538796.5
3UTR CCA 72 bp ATGAGAGGGAGATGGTGGCAATGCTACCGCTTCAGATaGCCCTGCTCTCCTGCAGCTGTACCAGACTCCTCC +
Preference number: 3 (lower is better)
Translates to: MRGRWWQCYRFR*PCSPAAVPDSS
Trigger: GGAGGAGTCTGGTACAGCTGCAGGAGAGCAGGGCCATCTGAAGCGGTAGCATTGCCACCATCTCCCTCTCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325954.9
3UTR GCA 72 bp CTTCTTAGGACCAGAGAACTGGGCAGGGCTAAACTCTaGCCGTTGAGCCTCTGCTACCTCATCTCGTCTTCC +
Preference number: 3 (lower is better)
Translates to: LLRTRELGRAKL*PLSLCYLISSS
Trigger: GGAAGACGAGATGAGGTAGCAGAGGCTCAACGGGCAGAGTTTAGCCCTGCCCAGTTCTCTGGTCCTAAGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538796.5
3UTR-3UTR CAA 90 bp CACTCAGTGAAAGATAGTGCAGGATGCATGCCCAGCAGAAGATGTGTCCACAACGGCTTATGTCCCCACTaGTTCCTCTTTCCCCAGCTA +
Preference number: 3 (lower is better)
Translates to: HSVKDSAGCMPSRRCVHNGLCPH*FLFPQL
Trigger: TAGCTGGGGAAAGAGGAACAAGTGGGGACATAAGCC...GTTGTGGACACATCTTCTGCTGGGCATGCATCCTGCACTATCTTTCACTGAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000538796.5
3UTR TCA 72 bp AGACAAACTGAGAGGTGTACTGAGTCCAGGAAGCCCTaGCATGATGCTACAGCAGAGCAGTGTGTGCCATTC +
Preference number: 3 (lower is better)
Translates to: RQTERCTESRKP*HDATAEQCVPF
Trigger: GAATGGCACACACTGCTCTGCTGTAGCATCATGTCAGGGCTTCCTGGACTCAGTACACCTCTCAGTTTGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325954.9
3UTR TCA 72 bp CTGCTCTCCTGCAGCTGTACCAGACTCCTCCTCCTATaGCTCAAGCCAGTCACTGAAAACAAGCTCGATCTT +
Preference number: 3 (lower is better)
Translates to: LLSCSCTRLLLL*LKPVTENKLDL
Trigger: AAGATCGAGCTTGTTTTCAGTGACTGGCTTGAGTCATAGGAGGAGGAGTCTGGTACAGCTGCAGGAGAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325954.9
3UTR GCA 72 bp CCAGCAGAAGATGTGTCCACAACGGGTTATCTTGGCTaGAGTAGGTGGATAGAGGCATATTGGGCAAGATGG +
Preference number: 3 (lower is better)
Translates to: PAEDVSTTGYLG*SRWIEAYWARW
Trigger: CCATCTTGCCCAATATGCCTCTATCCACCTACTGCAGCCAAGATAACCCGTTGTGGACACATCTTCTGCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536869.5
ENST00000538796.5
3UTR CCA 72 bp GGCTGCAGTAGGTGGATAGAGGCATATTGGGCAAGATaGCACTTCATGGCTACAAATGCGCACTTGTTCCAC +
Preference number: 3 (lower is better)
Translates to: GCSRWIEAYWAR*HFMATNAHLFH
Trigger: GTGGAACAAGTGCGCATTTGTAGCCATGAAGTGCCATCTTGCCCAATATGCCTCTATCCACCTACTGCAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536869.5
ENST00000538796.5
3UTR-3UTR CAA 90 bp GCAGAAGATGTGTCCACAACGGGTTATCTTGGCTGCAGTAGGTGGATAGAGGCAGCTACAAATGCGCACTaGTTCCACAAAGTCCCAGTT +
Preference number: 3 (lower is better)
Translates to: AEDVSTTGYLGCSRWIEAATNAH*FHKVPV
Trigger: AACTGGGACTTTGTGGAACAAGTGCGCATTTGTAGC...TGCCTCTATCCACCTACTGCAGCCAAGATAACCCGTTGTGGACACATCTTCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536869.5
ENST00000538796.5
3UTR-3UTR CAA 90 bp CTGGCCACGGGGTTCAAAAGTGAAATTCAACAAGTGGTTCAGGTTGATCTTCTTGCTGCCGCCGCCCCTTaGAGGAGGCATCTTGTTAAA +
Preference number: 3 (lower is better)
Translates to: LATGFKSEIQQVVQVDLLAAAAP*RRHLVK
Trigger: TTTAACAAGATGCCTCCTCAAAGGGGCGGCGGCAGC...AAGAAGATCAACCTGAACCACTTGTTGAATTTCACTTTTGAACCCCGTGGCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000538796.5
3UTR GCA 72 bp CATGCTCAAGAAGAGGCAAAACCCTCCTTTCACACATaGAAGTGCCAAGGACAGCCTACTCCATTAAGCTGG +
Preference number: 3 (lower is better)
Translates to: HAQEEAKPSFHT*KCQGQPTPLSW
Trigger: CCAGCTTAATGGAGTAGGCTGTCCTTGGCACTTGCATGTGTGAAAGGAGGGTTTTGCCTCTTCTTGAGCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325954.9
3UTR CCA 72 bp GGTTATCTTGGCTGCAGTAGGTGGATAGAGGCATATTaGGCAAGATGGCACTTCATGGCTACAAATGCGCAC +
Preference number: 3 (lower is better)
Translates to: GYLGCSRWIEAY*ARWHFMATNAH
Trigger: GTGCGCATTTGTAGCCATGAAGTGCCATCTTGCCCAATATGCCTCTATCCACCTACTGCAGCCAAGATAACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536869.5
ENST00000538796.5
3UTR CCA 72 bp GATGTGTCCACAACGGGTTATCTTGGCTGCAGTAGGTaGATAGAGGCATATTGGGCAAGATGGCACTTCATG +
Preference number: 3 (lower is better)
Translates to: DVSTTGYLGCSR*IEAYWARWHFM
Trigger: CATGAAGTGCCATCTTGCCCAATATGCCTCTATCCACCTACTGCAGCCAAGATAACCCGTTGTGGACACATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536869.5
ENST00000538796.5
3UTR-3UTR CAA 90 bp GTGAAAGATAGTGCAGGATGCATGCCCAGCAGAAGATGTGTCCACAACGGGTTAGTGGATAGAGGCATATaGGGCAAGATGGCACTTCAT +
Preference number: 3 (lower is better)
Translates to: VKDSAGCMPSRRCVHNGLVDRGI*GKMALH
Trigger: ATGAAGTGCCATCTTGCCCAATATGCCTCTATCCAC...TAACCCGTTGTGGACACATCTTCTGCTGGGCATGCATCCTGCACTATCTTTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536869.5
ENST00000538796.5
3UTR-3UTR CAA 90 bp GCCTTCAAAGTGACCCGTCTGGCCACGGGGTTCAAAAGTGAAATTCAACAAGTGGTGGATAGAGGCATATaGGGCAAGATGGCACTTCAT +
Preference number: 3 (lower is better)
Translates to: AFKVTRLATGFKSEIQQVVDRGI*GKMALH
Trigger: ATGAAGTGCCATCTTGCCCAATATGCCTCTATCCAC...CACTTGTTGAATTTCACTTTTGAACCCCGTGGCCAGACGGGTCACTTTGAAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000538796.5
3UTR GCA 72 bp CTACAGCAGAGCAGTGTGTGCCATTCTGGGTTGGACTaGTCTAATGCATCTCAAAGGGGACTCAATCTTACT +
Preference number: 3 (lower is better)
Translates to: LQQSSVCHSGLD*SNASQRGLNLT
Trigger: AGTAAGATTGAGTCCCCTTTGAGATGCATTAGAGCAGTCCAACCCAGAATGGCACACACTGCTCTGCTGTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325954.9
3UTR-3UTR CAA 90 bp CTGAGTCCAGGAAGCCCTGACATGATGCTACAGCAGAGCAGTGTGTGCCATTCTAATGAACTAAAAACCTaGGCAGGAAGAGATCTCTTG +
Preference number: 3 (lower is better)
Translates to: LSPGSPDMMLQQSSVCHSNELKT*AGRDLL
Trigger: CAAGAGATCTCTTCCTGCCAAGGTTTTTAGTTCATT...AGAATGGCACACACTGCTCTGCTGTAGCATCATGTCAGGGCTTCCTGGACTCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000325954.9
3UTR-3UTR CAA 90 bp CACTCAGTGAAAGATAGTGCAGGATGCATGCCCAGCAGAAGATGTGTCCACAACACCACAAATTGGCAGTaGGCCTGTAAAAAGAGTTCC +
Preference number: 3 (lower is better)
Translates to: HSVKDSAGCMPSRRCVHNTTNWQ*ACKKSS
Trigger: GGAACTCTTTTTACAGGCCAACTGCCAATTTGTGGT...GTTGTGGACACATCTTCTGCTGGGCATGCATCCTGCACTATCTTTCACTGAGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000538796.5
3UTR CCA 72 bp GTCTGGCCACGGGGTTCAAAAGTGAAATTCAACAAGTaGTTCAGGTTGATCTTCTTAGGACCAGAGAACTGG +
Preference number: 3 (lower is better)
Translates to: VWPRGSKVKFNK*FRLIFLGPENW
Trigger: CCAGTTCTCTGGTCCTAAGAAGATCAACCTGAACCACTTGTTGAATTTCACTTTTGAACCCCGTGGCCAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000538796.5
3UTR-3UTR CAA 90 bp GGTTCAAAAGTGAAATTCAACAAGTGGTTCAGGTTGATCTTCTTAGGACCAGAGGAGCGACGGGACTGGTaGTTAAAACTTTCATTTTTG +
Preference number: 3 (lower is better)
Translates to: GSKVKFNKWFRLIFLGPEERRDW*LKLSFL
Trigger: CAAAAATGAAAGTTTTAACAACCAGTCCCGTCGCTC...CTCTGGTCCTAAGAAGATCAACCTGAACCACTTGTTGAATTTCACTTTTGAACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000538796.5
3UTR-3UTR CAA 90 bp CAGGTGATTTATTGCAACTATTTGCCTTCGCATTCTAATGCACCTAGAGGTCACGCAGGAAGAGATCTCTaGTGTCAATACTTTATTTTG +
Preference number: 3 (lower is better)
Translates to: QVIYCNYLPSHSNAPRGHAGRDL*CQYFIL
Trigger: CAAAATAAAGTATTGACACAAGAGATCTCTTCCTGC...GTGACCTCTAGGTGCATTAGAATGCGAAGGCAAATAGTTGCAATAAATCACCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325954.9
CDS-3UTR GCA 90 bp GGCCCTGCTCTCCTGCAGCTGTACCAGACTCCTCCTCCTATGACTCAAGCCAGTGAGCGGGGCGGCTGTTaGCCTTTGCTGCTGCCCGAA +
Preference number: 4 (lower is better)
Translates to: GPALLQLYQTPPPMTQASERGGC*PLLLPE
Trigger: TTCGGGCAGCAGCAAAGGGCAACAGCCGCCCCGCTC...ACTGGCTTGAGTCATAGGAGGAGGAGTCTGGTACAGCTGCAGGAGAGCAGGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325954.9
CDS-3UTR CCA 90 bp CCCTGCTCTCCTGCAGCTGTACCAGACTCCTCCTCCTATGACTCAAGCCAGTCAACGGATACTCGCCCCTaGGCCGAGGCCGACCTGCTC +
Preference number: 4 (lower is better)
Translates to: PCSPAAVPDSSSYDSSQSTDTRP*AEADLL
Trigger: GAGCAGGTCGGCCTCGGCCCAGGGGCGAGTATCCGT...TGACTGGCTTGAGTCATAGGAGGAGGAGTCTGGTACAGCTGCAGGAGAGCAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325954.9
CDS-3UTR GCA 90 bp GGCCCTGCTCTCCTGCAGCTGTACCAGACTCCTCCTCCTATGACTCAAGCCAGTGTTGCCCTTTGCTGCTaGCCGAAGAGGCGGAGGAGC +
Preference number: 4 (lower is better)
Translates to: GPALLQLYQTPPPMTQASVALCC*PKRRRS
Trigger: GCTCCTCCGCCTCTTCGGGCAGCAGCAAAGGGCAAC...ACTGGCTTGAGTCATAGGAGGAGGAGTCTGGTACAGCTGCAGGAGAGCAGGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325954.9
CDS-3UTR TCA 90 bp CCCTGCTCTCCTGCAGCTGTACCAGACTCCTCCTCCTATGACTCAAGCCAGTCACCACTGCCTTCAAAGTaGCCCGTCTGGCCACGGGGT +
Preference number: 4 (lower is better)
Translates to: PCSPAAVPDSSSYDSSQSPLPSK*PVWPRG
Trigger: ACCCCGTGGCCAGACGGGTCACTTTGAAGGCAGTGG...TGACTGGCTTGAGTCATAGGAGGAGGAGTCTGGTACAGCTGCAGGAGAGCAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325954.9
CDS-3UTR CCA 90 bp GGCCCTGCTCTCCTGCAGCTGTACCAGACTCCTCCTCCTATGACTCAAGCCAGTGTCATCACAGGCCTCTaGCAACCCCTCAGGCTCTGG +
Preference number: 4 (lower is better)
Translates to: GPALLQLYQTPPPMTQASVITGL*QPLRLW
Trigger: CCAGAGCCTGAGGGGTTGCCAGAGGCCTGTGATGAC...ACTGGCTTGAGTCATAGGAGGAGGAGTCTGGTACAGCTGCAGGAGAGCAGGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325954.9
CDS-3UTR GCA 90 bp CAAGAAGAGGCAAAACCCTCCTTTCACACATGCAAGTGCCAAGGACAGCCTACTGGGCCGAGGCCGACCTaGTCCGGGAATGGCGACGAG +
Preference number: 4 (lower is better)
Translates to: QEEAKPSFHTCKCQGQPTGPRPT*SGNGDE
Trigger: CTCGTCGCCATTCCCGGAGCAGGTCGGCCTCGGCCC...AGTAGGCTGTCCTTGGCACTTGCATGTGTGAAAGGAGGGTTTTGCCTCTTCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325954.9
CDS-3UTR GCA 90 bp CTGAGTCCAGGAAGCCCTGACATGATGCTACAGCAGAGCAGTGTGTGCCATTCTCCCCATGGCCCTCGGTaGTGGTGGGACCCAAAGCAG +
Preference number: 4 (lower is better)
Translates to: LSPGSPDMMLQQSSVCHSPHGPR*WWDPKQ
Trigger: CTGCTTTGGGTCCCACCAGCACCGAGGGCCATGGGG...AGAATGGCACACACTGCTCTGCTGTAGCATCATGTCAGGGCTTCCTGGACTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325954.9
CDS-3UTR CCA 90 bp CAGCAGAGCAGTGTGTGCCATTCTGGGTTGGACTGCTCTAATGCATCTCAAAGGGGCAGGGGAGAGGGCTaGCTGTCTCGGTGTCGGGGA +
Preference number: 4 (lower is better)
Translates to: QQSSVCHSGLDCSNASQRGRGEG*LSRCRG
Trigger: TCCCCGACACCGAGACAGCCAGCCCTCTCCCCTGCC...CCTTTGAGATGCATTAGAGCAGTCCAACCCAGAATGGCACACACTGCTCTGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000325954.9
CDS-3UTR CCA 90 bp TCAAGAAGAGGCAAAACCCTCCTTTCACACATGCAAGTGCCAAGGACAGCCTACCGGTGGCGGCGGCGTTaGGGGAGCTCAGCGGCATCA +
Preference number: 4 (lower is better)
Translates to: SRRGKTLLSHMQVPRTAYRWRRR*GSSAAS
Trigger: TGATGCCGCTGAGCTCCCCCAACGCCGCCGCCACCG...GTAGGCTGTCCTTGGCACTTGCATGTGTGAAAGGAGGGTTTTGCCTCTTCTTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325954.9
CDS-3UTR CCA 90 bp TGGGCAAGATGGCACTTCATGGCTACAAATGCGCACTTGTTCCACAAAGTCCCATTTAGACTCGCCGGCTaGCCCCGCCGAGGCGGAGCG +
Preference number: 4 (lower is better)
Translates to: WARWHFMATNAHLFHKVPFRLAG*PRRGGA
Trigger: CGCTCCGCCTCGGCGGGGCCAGCCGGCGAGTCTAAA...TGGGACTTTGTGGAACAAGTGCGCATTTGTAGCCATGAAGTGCCATCTTGCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536869.5
ENST00000538796.5
CDS-3UTR CCA 90 bp CCCTGCTCTCCTGCAGCTGTACCAGACTCCTCCTCCTATGACTCAAGCCAGTCAGGCCCTCGGTGCTGGTaGGACCCAAAGCAGAATCAG +
Preference number: 4 (lower is better)
Translates to: PCSPAAVPDSSSYDSSQSGPRCW*DPKQNQ
Trigger: CTGATTCTGCTTTGGGTCCCACCAGCACCGAGGGCC...TGACTGGCTTGAGTCATAGGAGGAGGAGTCTGGTACAGCTGCAGGAGAGCAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325954.9
CDS-3UTR CCA 90 bp GGCCCTGCTCTCCTGCAGCTGTACCAGACTCCTCCTCCTATGACTCAAGCCAGTCATGGCCCTCGGTGCTaGTGGGACCCAAAGCAGAAT +
Preference number: 4 (lower is better)
Translates to: GPALLQLYQTPPPMTQASHGPRC*WDPKQN
Trigger: ATTCTGCTTTGGGTCCCACCAGCACCGAGGGCCATG...ACTGGCTTGAGTCATAGGAGGAGGAGTCTGGTACAGCTGCAGGAGAGCAGGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325954.9
CDS-3UTR TCA 90 bp CCAGGAAGCCCTGACATGATGCTACAGCAGAGCAGTGTGTGCCATTCTGGGTTGACTCCCAACGCAGAATaGGGGACTGCCCTGACTGGC +
Preference number: 4 (lower is better)
Translates to: PGSPDMMLQQSSVCHSGLTPNAE*GTALTG
Trigger: GCCAGTCAGGGCAGTCCCTCATTCTGCGTTGGGAGT...CAACCCAGAATGGCACACACTGCTCTGCTGTAGCATCATGTCAGGGCTTCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325954.9
CDS-3UTR GCA 90 bp CCAGGAAGCCCTGACATGATGCTACAGCAGAGCAGTGTGTGCCATTCTGGGTTGCAGGACTCGGGAGTGTaGTTCTCCTCTGCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: PGSPDMMLQQSSVCHSGLQDSGV*FSSASC
Trigger: GCAGCTGGCAGAGGAGAAGCACACTCCCGAGTCCTG...CAACCCAGAATGGCACACACTGCTCTGCTGTAGCATCATGTCAGGGCTTCCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325954.9
CDS-3UTR GCA 90 bp AAGAAGAGGCAAAACCCTCCTTTCACACATGCAAGTGCCAAGGACAGCCTACTCGGCTCCTCTCCAGGCTaGCGTACTCCCGCACGAGGC +
Preference number: 4 (lower is better)
Translates to: KKRQNPPFTHASAKDSLLGSSPG*RTPARG
Trigger: GCCTCGTGCGGGAGTACGGCAGCCTGGAGAGGAGCC...GAGTAGGCTGTCCTTGGCACTTGCATGTGTGAAAGGAGGGTTTTGCCTCTTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325954.9
CDS-3UTR CCA 90 bp GCAGTGTGTGCCATTCTGGGTTGGACTGCTCTAATGCATCTCAAAGGGGACTCAATGGAGAGGGCCCCATaGCCCTCGGTGCTGGTGGGA +
Preference number: 4 (lower is better)
Translates to: AVCAILGWTALMHLKGDSMERAP*PSVLVG
Trigger: TCCCACCAGCACCGAGGGCCATGGGGCCCTCTCCAT...TGAGTCCCCTTTGAGATGCATTAGAGCAGTCCAACCCAGAATGGCACACACTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325954.9
CDS-3UTR CCA 90 bp CCTGCTCTCCTGCAGCTGTACCAGACTCCTCCTCCTATGACTCAAGCCAGTCACTGCTACCGCTTCAGATaGCCCTGCTCTCCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: PALLQLYQTPPPMTQASHCYRFR*PCSPAA
Trigger: AGCTGCAGGAGAGCAGGGCCATCTGAAGCGGTAGCA...GTGACTGGCTTGAGTCATAGGAGGAGGAGTCTGGTACAGCTGCAGGAGAGCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325954.9
CDS-3UTR TCA 90 bp GCAGAAGATGTGTCCACAACGGGTTATCTTGGCTGCAGTAGGTGGATAGAGGCACCACTGCCTTCAAAGTaGCCCGTCTGGCCACGGGGT +
Preference number: 4 (lower is better)
Translates to: AEDVSTTGYLGCSRWIEAPLPSK*PVWPRG
Trigger: ACCCCGTGGCCAGACGGGTCACTTTGAAGGCAGTGG...TGCCTCTATCCACCTACTGCAGCCAAGATAACCCGTTGTGGACACATCTTCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538796.5
CDS-3UTR GCA 90 bp AGAGGCAAAACCCTCCTTTCACACATGCAAGTGCCAAGGACAGCCTACTCCATTGCGGCTGTTGCCCTTTaGTGCTGCCCGAAGAGGCGG +
Preference number: 4 (lower is better)
Translates to: RGKTLLSHMQVPRTAYSIAAVAL*CCPKRR
Trigger: CCGCCTCTTCGGGCAGCAGCAAAGGGCAACAGCCGC...AATGGAGTAGGCTGTCCTTGGCACTTGCATGTGTGAAAGGAGGGTTTTGCCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325954.9
CDS-3UTR GCA 90 bp GTGAAAGATAGTGCAGGATGCATGCCCAGCAGAAGATGTGTCCACAACGGGTTAGAGCGGGGCGGCTGTTaGCCTTTGCTGCTGCCCGAA +
Preference number: 4 (lower is better)
Translates to: VKDSAGCMPSRRCVHNGLERGGC*PLLLPE
Trigger: TTCGGGCAGCAGCAAAGGGCAACAGCCGCCCCGCTC...TAACCCGTTGTGGACACATCTTCTGCTGGGCATGCATCCTGCACTATCTTTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536869.5
ENST00000538796.5
CDS-3UTR CCA 90 bp ATTCAGCTCAAACCAAGGCATAAGAAAACTGCTCTAGATGAGAGGGAGATGGTGGGGGACCCAGGCTCATaGCGTTCAGGGCCGGCGGGG +
Preference number: 4 (lower is better)
Translates to: IQLKPRHKKTALDEREMVGDPGS*RSGPAG
Trigger: CCCCGCCGGCCCTGAACGCCATGAGCCTGGGTCCCC...CACCATCTCCCTCTCATCTAGAGCAGTTTTCTTATGCCTTGGTTTGAGCTGAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325954.9
CDS-3UTR CCA 90 bp CTGGCCACGGGGTTCAAAAGTGAAATTCAACAAGTGGTTCAGGTTGATCTTCTTGGGGACCCAGGCTCATaGCGTTCAGGGCCGGCGGGG +
Preference number: 4 (lower is better)
Translates to: LATGFKSEIQQVVQVDLLGDPGS*RSGPAG
Trigger: CCCCGCCGGCCCTGAACGCCATGAGCCTGGGTCCCC...AAGAAGATCAACCTGAACCACTTGTTGAATTTCACTTTTGAACCCCGTGGCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000538796.5
CDS-3UTR TCA 90 bp CCCTGCTCTCCTGCAGCTGTACCAGACTCCTCCTCCTATGACTCAAGCCAGTCAAACCTGGACTTCTGCTaGGAGGAGAAATGGAGAGGG +
Preference number: 4 (lower is better)
Translates to: PCSPAAVPDSSSYDSSQSNLDFC*EEKWRG
Trigger: CCCTCTCCATTTCTCCTCTCAGCAGAAGTCCAGGTT...TGACTGGCTTGAGTCATAGGAGGAGGAGTCTGGTACAGCTGCAGGAGAGCAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325954.9
CDS-3UTR GCA 90 bp ACAACGGGTTATCTTGGCTGCAGTAGGTGGATAGAGGCATATTGGGCAAGATGGGTTGCCCTTTGCTGCTaGCCGAAGAGGCGGAGGAGC +
Preference number: 4 (lower is better)
Translates to: TTGYLGCSRWIEAYWARWVALCC*PKRRRS
Trigger: GCTCCTCCGCCTCTTCGGGCAGCAGCAAAGGGCAAC...CCATCTTGCCCAATATGCCTCTATCCACCTACTGCAGCCAAGATAACCCGTTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536869.5
ENST00000538796.5
CDS-3UTR GCA 90 bp GACATTTACTCCACGTCTTCTCACTCAGTGAAAGATAGTGCAGGATGCATGCCCGCGGCTGTTGCCCTTTaGTGCTGCCCGAAGAGGCGG +
Preference number: 4 (lower is better)
Translates to: DIYSTSSHSVKDSAGCMPAAVAL*CCPKRR
Trigger: CCGCCTCTTCGGGCAGCAGCAAAGGGCAACAGCCGC...GGGCATGCATCCTGCACTATCTTTCACTGAGTGAGAAGACGTGGAGTAAATGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536869.5
ENST00000538796.5
CDS-3UTR GCA 90 bp CAGCAGAGCAGTGTGTGCCATTCTGGGTTGGACTGCTCTAATGCATCTCAAAGGCGCAGAATGAGGGACTaGCCTGACTGGCAGTGGGTG +
Preference number: 4 (lower is better)
Translates to: QQSSVCHSGLDCSNASQRRRMRD*PDWQWV
Trigger: CACCCACTGCCAGTCAGGGCAGTCCCTCATTCTGCG...CCTTTGAGATGCATTAGAGCAGTCCAACCCAGAATGGCACACACTGCTCTGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325954.9
CDS-3UTR GCA 90 bp CTGAGTCCAGGAAGCCCTGACATGATGCTACAGCAGAGCAGTGTGTGCCATTCTGGGAGATGGTGGCAATaGTACCGCTTCAGATGGCCC +
Preference number: 4 (lower is better)
Translates to: LSPGSPDMMLQQSSVCHSGRWWQ*YRFRWP
Trigger: GGGCCATCTGAAGCGGTAGCATTGCCACCATCTCCC...AGAATGGCACACACTGCTCTGCTGTAGCATCATGTCAGGGCTTCCTGGACTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325954.9
CDS-3UTR CCA 90 bp CTGGCCACGGGGTTCAAAAGTGAAATTCAACAAGTGGTTCAGGTTGATCTTCTTTTTAGACTCGCCGGCTaGCCCCGCCGAGGCGGAGCG +
Preference number: 4 (lower is better)
Translates to: LATGFKSEIQQVVQVDLLFRLAG*PRRGGA
Trigger: CGCTCCGCCTCGGCGGGGCCAGCCGGCGAGTCTAAA...AAGAAGATCAACCTGAACCACTTGTTGAATTTCACTTTTGAACCCCGTGGCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000538796.5
CDS-3UTR CCA 90 bp CCTGCTCTCCTGCAGCTGTACCAGACTCCTCCTCCTATGACTCAAGCCAGTCACGTGATGGGTTCCTGCTaGCTGGACTCAGTGCAAATG +
Preference number: 4 (lower is better)
Translates to: PALLQLYQTPPPMTQASHVMGSC*LDSVQM
Trigger: CATTTGCACTGAGTCCAGCCAGCAGGAACCCATCAC...GTGACTGGCTTGAGTCATAGGAGGAGGAGTCTGGTACAGCTGCAGGAGAGCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325954.9
3UTR CAA 72 bp AGGACCAGAGAACTGGGCAGGGCTAAACTCTGCCCGTaGAGCCTCTGCTACCTCATCTCGTCTTCCACCATT +
Preference number: 4 (lower is better)
Translates to: RTRELGRAKLCP*SLCYLISSSTI
Trigger: AATGGTGGAAGACGAGATGAGGTAGCAGAGGCTCAACGGGCAGAGTTTAGCCCTGCCCAGTTCTCTGGTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538796.5
CDS-3UTR TCA 90 bp GACTCAAGCCAGTCACTGAAAACAAGCTCGATCTTAGGGGTAGCAGGTCTCAGGGAGGCGTGTGAAGCCTaGCTTGGTGATGGGTTCCTG +
Preference number: 4 (lower is better)
Translates to: DSSQSLKTSSILGVAGLREACEA*LGDGFL
Trigger: CAGGAACCCATCACCAAGTCAGGCTTCACACGCCTC...CCTGAGACCTGCTACCCCTAAGATCGAGCTTGTTTTCAGTGACTGGCTTGAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325954.9
CDS-3UTR TCA 90 bp GAAGAGGCAAAACCCTCCTTTCACACATGCAAGTGCCAAGGACAGCCTACTCCACTCCACCACAGTTGCTaGGATCTTCTCGGGGCTCCT +
Preference number: 4 (lower is better)
Translates to: EEAKPSFHTCKCQGQPTPLHHSC*DLLGAP
Trigger: AGGAGCCCCGAGAAGATCTCAGCAACTGTGGTGGAG...TGGAGTAGGCTGTCCTTGGCACTTGCATGTGTGAAAGGAGGGTTTTGCCTCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325954.9
CDS-3UTR TCA 90 bp CAGCAGAGCAGTGTGTGCCATTCTGGGTTGGACTGCTCTAATGCATCTCAAAGGAATGAGGGACTGCCCTaGCTGGCAGTGGGTGACAGA +
Preference number: 4 (lower is better)
Translates to: QQSSVCHSGLDCSNASQRNEGLP*LAVGDR
Trigger: TCTGTCACCCACTGCCAGTCAGGGCAGTCCCTCATT...CCTTTGAGATGCATTAGAGCAGTCCAACCCAGAATGGCACACACTGCTCTGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325954.9
CDS-3UTR TCA 90 bp CCAGGAAGCCCTGACATGATGCTACAGCAGAGCAGTGTGTGCCATTCTGGGTTGGGACGACTGAGGTGCTaGACAGGAGCTTCTGTTTCT +
Preference number: 4 (lower is better)
Translates to: PGSPDMMLQQSSVCHSGLGRLRC*TGASVS
Trigger: AGAAACAGAAGCTCCTGTTCAGCACCTCAGTCGTCC...CAACCCAGAATGGCACACACTGCTCTGCTGTAGCATCATGTCAGGGCTTCCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325954.9
CDS-3UTR GCA 90 bp CCTGCTCTCCTGCAGCTGTACCAGACTCCTCCTCCTATGACTCAAGCCAGTCACCTCTGGTTCAGACACTaGTTCCTCCTCTTCTACCAG +
Preference number: 4 (lower is better)
Translates to: PALLQLYQTPPPMTQASHLWFRH*FLLFYQ
Trigger: CTGGTAGAAGAGGAGGAAGCAGTGTCTGAACCAGAG...GTGACTGGCTTGAGTCATAGGAGGAGGAGTCTGGTACAGCTGCAGGAGAGCAGG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325954.9
CDS-3UTR GCA 90 bp CCAGGAAGCCCTGACATGATGCTACAGCAGAGCAGTGTGTGCCATTCTGGGTTGTTGGTGATGGGTTCCTaGTGGCTGGACTCAGTGCAA +
Preference number: 4 (lower is better)
Translates to: PGSPDMMLQQSSVCHSGLLVMGS*WLDSVQ
Trigger: TTGCACTGAGTCCAGCCAGCAGGAACCCATCACCAA...CAACCCAGAATGGCACACACTGCTCTGCTGTAGCATCATGTCAGGGCTTCCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325954.9
CDS-3UTR GCA 90 bp GCAGTGTGTGCCATTCTGGGTTGGACTGCTCTAATGCATCTCAAAGGGGACTCACCTCTATCTCAATCCTaGGCTCTCGGCGGCGTTCCT +
Preference number: 4 (lower is better)
Translates to: AVCAILGWTALMHLKGDSPLSQS*ALGGVP
Trigger: AGGAACGCCGCCGAGAGCGCAGGATTGAGATAGAGG...TGAGTCCCCTTTGAGATGCATTAGAGCAGTCCAACCCAGAATGGCACACACTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325954.9
CDS-3UTR CCA 90 bp CTGAGTCCAGGAAGCCCTGACATGATGCTACAGCAGAGCAGTGTGTGCCATTCTCAACCCCTCAGGCTCTaGTTCAGACACTGCTTCCTC +
Preference number: 4 (lower is better)
Translates to: LSPGSPDMMLQQSSVCHSQPLRL*FRHCFL
Trigger: GAGGAAGCAGTGTCTGAACCAGAGCCTGAGGGGTTG...AGAATGGCACACACTGCTCTGCTGTAGCATCATGTCAGGGCTTCCTGGACTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325954.9
CDS-3UTR CCA 90 bp AGAGGCAAAACCCTCCTTTCACACATGCAAGTGCCAAGGACAGCCTACTCCATTTGCCCTGACTGGCAGTaGGTGACAGAGGGGTCAGCA +
Preference number: 4 (lower is better)
Translates to: RGKTLLSHMQVPRTAYSICPDWQ*VTEGSA
Trigger: TGCTGACCCCTCTGTCACCCACTGCCAGTCAGGGCA...AATGGAGTAGGCTGTCCTTGGCACTTGCATGTGTGAAAGGAGGGTTTTGCCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325954.9
CDS-3UTR CCA 90 bp CTGAGTCCAGGAAGCCCTGACATGATGCTACAGCAGAGCAGTGTGTGCCATTCTCCTACTCCATTAAGCTaGCACCACAGCCTGGCCATG +
Preference number: 4 (lower is better)
Translates to: LSPGSPDMMLQQSSVCHSPTPLS*HHSLAM
Trigger: CATGGCCAGGCTGTGGTGCCAGCTTAATGGAGTAGG...AGAATGGCACACACTGCTCTGCTGTAGCATCATGTCAGGGCTTCCTGGACTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325954.9
CDS-3UTR TCA 90 bp GCAGTGTGTGCCATTCTGGGTTGGACTGCTCTAATGCATCTCAAAGGGGACTCACTGCCGCCGCCCCTTTaGGGAGGCATCTTGTTAAAA +
Preference number: 4 (lower is better)
Translates to: AVCAILGWTALMHLKGDSLPPPL*GGILLK
Trigger: TTTTAACAAGATGCCTCCTCAAAGGGGCGGCGGCAG...TGAGTCCCCTTTGAGATGCATTAGAGCAGTCCAACCCAGAATGGCACACACTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325954.9
CDS-3UTR TCA 90 bp GGCCCTGCTCTCCTGCAGCTGTACCAGACTCCTCCTCCTATGACTCAAGCCAGTTGGCAACAACACTCTTaGGATCCTTCTTATGCACAG +
Preference number: 4 (lower is better)
Translates to: GPALLQLYQTPPPMTQASWQQHS*DPSYAQ
Trigger: CTGTGCATAAGAAGGATCTCAAGAGTGTTGTTGCCA...ACTGGCTTGAGTCATAGGAGGAGGAGTCTGGTACAGCTGCAGGAGAGCAGGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325954.9
CDS-3UTR TCA 90 bp GAAGAGGCAAAACCCTCCTTTCACACATGCAAGTGCCAAGGACAGCCTACTCCAGAGTCCAGGAAGCCCTaGCATGATGCTACAGCAGAG +
Preference number: 4 (lower is better)
Translates to: EEAKPSFHTCKCQGQPTPESRKP*HDATAE
Trigger: CTCTGCTGTAGCATCATGTCAGGGCTTCCTGGACTC...TGGAGTAGGCTGTCCTTGGCACTTGCATGTGTGAAAGGAGGGTTTTGCCTCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325954.9
CDS-3UTR GCA 90 bp AGGATCAGCAAAATGAGCTGTGTAGTCTTGGTCTTCAGACACCACAAATTGGCAGAGCGGGGCGGCTGTTaGCCTTTGCTGCTGCCCGAA +
Preference number: 4 (lower is better)
Translates to: RISKMSCVVLVFRHHKLAERGGC*PLLLPE
Trigger: TTCGGGCAGCAGCAAAGGGCAACAGCCGCCCCGCTC...TGCCAATTTGTGGTGTCTGAAGACCAAGACTACACAGCTCATTTTGCTGATCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000538796.5
CDS-3UTR GCA 90 bp CTGAGTCCAGGAAGCCCTGACATGATGCTACAGCAGAGCAGTGTGTGCCATTCTTCCTCTGCCAGCTGCTaGTCTAGTGCTACTTTCTCC +
Preference number: 4 (lower is better)
Translates to: LSPGSPDMMLQQSSVCHSSSASC*SSATFS
Trigger: GGAGAAAGTAGCACTAGAGCAGCAGCTGGCAGAGGA...AGAATGGCACACACTGCTCTGCTGTAGCATCATGTCAGGGCTTCCTGGACTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325954.9
CDS-3UTR CCA 90 bp ACTTTCATTTTTGGGGTAGGAAAGTTCACGTTTGCGATTATAACGCTTGGATCCCGGTGGCGGCGGCGTTaGGGGAGCTCAGCGGCATCA +
Preference number: 4 (lower is better)
Translates to: TFIFGVGKFTFAIITLGSRWRRR*GSSAAS
Trigger: TGATGCCGCTGAGCTCCCCCAACGCCGCCGCCACCG...GGATCCAAGCGTTATAATCGCAAACGTGAACTTTCCTACCCCAAAAATGAAAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000538796.5
CDS-3UTR CCA 90 bp AGAGGCAAAACCCTCCTTTCACACATGCAAGTGCCAAGGACAGCCTACTCCATTAGGCGGAGGAGCTGTTaGAGCCGCTGTTCTTGTCCA +
Preference number: 4 (lower is better)
Translates to: RGKTLLSHMQVPRTAYSIRRRSC*SRCSCP
Trigger: TGGACAAGAACAGCGGCTCCAACAGCTCCTCCGCCT...AATGGAGTAGGCTGTCCTTGGCACTTGCATGTGTGAAAGGAGGGTTTTGCCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325954.9
CDS-3UTR CCA 90 bp CCTGCTCTCCTGCAGCTGTACCAGACTCCTCCTCCTATGACTCAAGCCAGTCACAACGCTTGGATCCACTaGAGTTCTTTCCATCGCTCT +
Preference number: 4 (lower is better)
Translates to: PALLQLYQTPPPMTQASHNAWIH*SSFHRS
Trigger: AGAGCGATGGAAAGAACTCCAGTGGATCCAAGCGTT...GTGACTGGCTTGAGTCATAGGAGGAGGAGTCTGGTACAGCTGCAGGAGAGCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325954.9
CDS-3UTR CCA 90 bp GACTCAAGCCAGTCACTGAAAACAAGCTCGATCTTAGGGGTAGCAGGTCTCAGGTGGGTTCCTGCTGGCTaGACTCAGTGCAAATGGTCC +
Preference number: 4 (lower is better)
Translates to: DSSQSLKTSSILGVAGLRWVPAG*TQCKWS
Trigger: GGACCATTTGCACTGAGTCCAGCCAGCAGGAACCCA...CCTGAGACCTGCTACCCCTAAGATCGAGCTTGTTTTCAGTGACTGGCTTGAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325954.9
CDS-3UTR CCA 90 bp GCAGTGTGTGCCATTCTGGGTTGGACTGCTCTAATGCATCTCAAAGGGGACTCACCAACCCTCAGCATCTaGGCAAAGGAAGGGAAGGGA +
Preference number: 4 (lower is better)
Translates to: AVCAILGWTALMHLKGDSPTLSI*AKEGKG
Trigger: TCCCTTCCCTTCCTTTGCCCAGATGCTGAGGGTTGG...TGAGTCCCCTTTGAGATGCATTAGAGCAGTCCAACCCAGAATGGCACACACTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325954.9
CDS-3UTR TCA 90 bp GACTCAAGCCAGTCACTGAAAACAAGCTCGATCTTAGGGGTAGCAGGTCTCAGGAGTCTTGCTTTTCTGTaGACTGGAGCGACGGGACTG +
Preference number: 4 (lower is better)
Translates to: DSSQSLKTSSILGVAGLRSLAFL*TGATGL
Trigger: CAGTCCCGTCGCTCCAGTTCACAGAAAAGCAAGACT...CCTGAGACCTGCTACCCCTAAGATCGAGCTTGTTTTCAGTGACTGGCTTGAGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000325954.9
CDS-3UTR TCA 90 bp GAAGAGGCAAAACCCTCCTTTCACACATGCAAGTGCCAAGGACAGCCTACTCCACTAAACTCTGCCCGTTaGGCCTCTGCTACCTCATCT +
Preference number: 4 (lower is better)
Translates to: EEAKPSFHTCKCQGQPTPLNSAR*ASATSS
Trigger: AGATGAGGTAGCAGAGGCTCAACGGGCAGAGTTTAG...TGGAGTAGGCTGTCCTTGGCACTTGCATGTGTGAAAGGAGGGTTTTGCCTCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325954.9
CDS-3UTR TCA 90 bp CCAGGAAGCCCTGACATGATGCTACAGCAGAGCAGTGTGTGCCATTCTGGGTTGGAAAACTGCTCTAGATaGGAGGGAGATGGTGGCAAT +
Preference number: 4 (lower is better)
Translates to: PGSPDMMLQQSSVCHSGLENCSR*EGDGGN
Trigger: ATTGCCACCATCTCCCTCTCATCTAGAGCAGTTTTC...CAACCCAGAATGGCACACACTGCTCTGCTGTAGCATCATGTCAGGGCTTCCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325954.9
CDS-3UTR GCA 90 bp CCTGACATGATGCTACAGCAGAGCAGTGTGTGCCATTCTGGGTTGGACTGCTCTAGCTACCATGTCCACTaGCTTCAAAGTGACCCGTCT +
Preference number: 4 (lower is better)
Translates to: PDMMLQQSSVCHSGLDCSSYHVH*LQSDPS
Trigger: AGACGGGTCACTTTGAAGGCAGTGGACATGGTAGCT...AGAGCAGTCCAACCCAGAATGGCACACACTGCTCTGCTGTAGCATCATGTCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325954.9
CDS-3UTR GCA 90 bp GACTCAAGCCAGTCACTGAAAACAAGCTCGATCTTAGGGGTAGCAGGTCTCAGGGGGTGCAGGAACATATaGTGTCCATCTTCCGCTTGG +
Preference number: 4 (lower is better)
Translates to: DSSQSLKTSSILGVAGLRGCRNI*CPSSAW
Trigger: CCAAGCGGAAGATGGACAGCATATGTTCCTGCACCC...CCTGAGACCTGCTACCCCTAAGATCGAGCTTGTTTTCAGTGACTGGCTTGAGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000325954.9
CDS-3UTR GCA 90 bp CAGCAGAGCAGTGTGTGCCATTCTGGGTTGGACTGCTCTAATGCATCTCAAAGGCCCTCCTTTCACACATaGAAGTGCCAAGGACAGCCT +
Preference number: 4 (lower is better)
Translates to: QQSSVCHSGLDCSNASQRPSFHT*KCQGQP
Trigger: AGGCTGTCCTTGGCACTTGCATGTGTGAAAGGAGGG...CCTTTGAGATGCATTAGAGCAGTCCAACCCAGAATGGCACACACTGCTCTGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325954.9
CDS-3UTR CCA 90 bp TTCAAACTGGGTGTCCTAAATCCATTTTATTCCCACCCCTGTTTCTTTAACAAGTTTAGACTCGCCGGCTaGCCCCGCCGAGGCGGAGCG +
Preference number: 4 (lower is better)
Translates to: FKLGVLNPFYSHPCFFNKFRLAG*PRRGGA
Trigger: CGCTCCGCCTCGGCGGGGCCAGCCGGCGAGTCTAAA...CTTGTTAAAGAAACAGGGGTGGGAATAAAATGGATTTAGGACACCCAGTTTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000325954.9
CDS-3UTR CCA 90 bp AGAGAACTGGGCAGGGCTAAACTCTGCCCGTTGAGCCTCTGCTACCTCATCTCGCAAGATGGCACTTCATaGCTACAAATGCGCACTTGT +
Preference number: 4 (lower is better)
Translates to: RELGRAKLCPLSLCYLISQDGTS*LQMRTC
Trigger: ACAAGTGCGCATTTGTAGCCATGAAGTGCCATCTTG...CGAGATGAGGTAGCAGAGGCTCAACGGGCAGAGTTTAGCCCTGCCCAGTTCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538796.5
CDS-3UTR TCA 90 bp TGGGCAAGATGGCACTTCATGGCTACAAATGCGCACTTGTTCCACAAAGTCCCAAGTCTTGCTTTTCTGTaGACTGGAGCGACGGGACTG +
Preference number: 4 (lower is better)
Translates to: WARWHFMATNAHLFHKVPSLAFL*TGATGL
Trigger: CAGTCCCGTCGCTCCAGTTCACAGAAAAGCAAGACT...TGGGACTTTGTGGAACAAGTGCGCATTTGTAGCCATGAAGTGCCATCTTGCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536869.5
ENST00000538796.5
CDS-3UTR TCA 90 bp GACATTTACTCCACGTCTTCTCACTCAGTGAAAGATAGTGCAGGATGCATGCCCCTGCCGCCGCCCCTTTaGGGAGGCATCTTGTTAAAA +
Preference number: 4 (lower is better)
Translates to: DIYSTSSHSVKDSAGCMPLPPPL*GGILLK
Trigger: TTTTAACAAGATGCCTCCTCAAAGGGGCGGCGGCAG...GGGCATGCATCCTGCACTATCTTTCACTGAGTGAGAAGACGTGGAGTAAATGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536869.5
ENST00000538796.5
CDS-3UTR GCA 90 bp CAGAACTGTAACAGATGGGACATTTACTCCACGTCTTCTCACTCAGTGAAAGATGTTGCCCTTTGCTGCTaGCCGAAGAGGCGGAGGAGC +
Preference number: 4 (lower is better)
Translates to: QNCNRWDIYSTSSHSVKDVALCC*PKRRRS
Trigger: GCTCCTCCGCCTCTTCGGGCAGCAGCAAAGGGCAAC...ATCTTTCACTGAGTGAGAAGACGTGGAGTAAATGTCCCATCTGTTACAGTTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536869.5
ENST00000538796.5
CDS-3UTR GCA 90 bp TCATGGCTACAAATGCGCACTTGTTCCACAAAGTCCCAGTTAACTAATGTATCAGCGGCTGTTGCCCTTTaGTGCTGCCCGAAGAGGCGG +
Preference number: 4 (lower is better)
Translates to: SWLQMRTCSTKSQLTNVSAAVAL*CCPKRR
Trigger: CCGCCTCTTCGGGCAGCAGCAAAGGGCAACAGCCGC...TGATACATTAGTTAACTGGGACTTTGTGGAACAAGTGCGCATTTGTAGCCATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536869.5
ENST00000538796.5
CDS-3UTR CCA 90 bp GACTCAAGCCAGTCACTGAAAACAAGCTCGATCTTAGGGGTAGCAGGTCTCAGGTGCTTTTCTGTGAACTaGAGCGACGGGACTGGTTGT +
Preference number: 4 (lower is better)
Translates to: DSSQSLKTSSILGVAGLRCFSVN*SDGTGC
Trigger: ACAACCAGTCCCGTCGCTCCAGTTCACAGAAAAGCA...CCTGAGACCTGCTACCCCTAAGATCGAGCTTGTTTTCAGTGACTGGCTTGAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000325954.9
CDS-3UTR CCA 90 bp AGAGGCAAAACCCTCCTTTCACACATGCAAGTGCCAAGGACAGCCTACTCCATTTTAGGACCAGAGAACTaGGCAGGGCTAAACTCTGCC +
Preference number: 4 (lower is better)
Translates to: RGKTLLSHMQVPRTAYSILGPEN*AGLNSA
Trigger: GGCAGAGTTTAGCCCTGCCCAGTTCTCTGGTCCTAA...AATGGAGTAGGCTGTCCTTGGCACTTGCATGTGTGAAAGGAGGGTTTTGCCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325954.9
CDS-3UTR CCA 90 bp GCCTTCAAAGTGACCCGTCTGGCCACGGGGTTCAAAAGTGAAATTCAACAAGTGTTAGGACCAGAGAACTaGGCAGGGCTAAACTCTGCC +
Preference number: 4 (lower is better)
Translates to: AFKVTRLATGFKSEIQQVLGPEN*AGLNSA
Trigger: GGCAGAGTTTAGCCCTGCCCAGTTCTCTGGTCCTAA...CACTTGTTGAATTTCACTTTTGAACCCCGTGGCCAGACGGGTCACTTTGAAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000538796.5
CDS-3UTR CCA 90 bp ACGGGTTATCTTGGCTGCAGTAGGTGGATAGAGGCATATTGGGCAAGATGGCACCTTGGCTGCAGTAGGTaGATAGAGGCATATTGGGCA +
Preference number: 4 (lower is better)
Translates to: TGYLGCSRWIEAYWARWHLGCSR*IEAYWA
Trigger: TGCCCAATATGCCTCTATCCACCTACTGCAGCCAAG...GTGCCATCTTGCCCAATATGCCTCTATCCACCTACTGCAGCCAAGATAACCCGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536869.5
ENST00000538796.5
CDS-3UTR CCA 90 bp CCCTGCTCTCCTGCAGCTGTACCAGACTCCTCCTCCTATGACTCAAGCCAGTCACAGAACTGTAACAGATaGGACATTTACTCCACGTCT +
Preference number: 4 (lower is better)
Translates to: PCSPAAVPDSSSYDSSQSQNCNR*DIYSTS
Trigger: AGACGTGGAGTAAATGTCCCATCTGTTACAGTTCTG...TGACTGGCTTGAGTCATAGGAGGAGGAGTCTGGTACAGCTGCAGGAGAGCAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325954.9
CDS-3UTR CCA 90 bp CCTGACATGATGCTACAGCAGAGCAGTGTGTGCCATTCTGGGTTGGACTGCTCTAGCAACTTGGAGTACTaGCTGTGCTGTTCATCTCCT +
Preference number: 4 (lower is better)
Translates to: PDMMLQQSSVCHSGLDCSSNLEY*LCCSSP
Trigger: AGGAGATGAACAGCACAGCCAGTACTCCAAGTTGCT...AGAGCAGTCCAACCCAGAATGGCACACACTGCTCTGCTGTAGCATCATGTCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325954.9
CDS-3UTR CCA 90 bp TCAAGAAGAGGCAAAACCCTCCTTTCACACATGCAAGTGCCAAGGACAGCCTACAGGCCAGCAGCAACTTaGAGTACTGGCTGTGCTGTT +
Preference number: 4 (lower is better)
Translates to: SRRGKTLLSHMQVPRTAYRPAAT*STGCAV
Trigger: AACAGCACAGCCAGTACTCCAAGTTGCTGCTGGCCT...GTAGGCTGTCCTTGGCACTTGCATGTGTGAAAGGAGGGTTTTGCCTCTTCTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325954.9
CDS-3UTR CCA 90 bp AAGAAGAGGCAAAACCCTCCTTTCACACATGCAAGTGCCAAGGACAGCCTACTCTTCTCGAGGGGAATGTaGACTTCTGGGTACTTGCCC +
Preference number: 4 (lower is better)
Translates to: KKRQNPPFTHASAKDSLLFSRGM*TSGYLP
Trigger: GGGCAAGTACCCAGAAGTCCACATTCCCCTCGAGAA...GAGTAGGCTGTCCTTGGCACTTGCATGTGTGAAAGGAGGGTTTTGCCTCTTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325954.9
CDS-3UTR TCA 90 bp CCAGGAAGCCCTGACATGATGCTACAGCAGAGCAGTGTGTGCCATTCTGGGTTGCACGGGGTTCAAAAGTaGAATTCAACAAGTGGTTCA +
Preference number: 4 (lower is better)
Translates to: PGSPDMMLQQSSVCHSGLHGVQK*NSTSGS
Trigger: TGAACCACTTGTTGAATTTCACTTTTGAACCCCGTG...CAACCCAGAATGGCACACACTGCTCTGCTGTAGCATCATGTCAGGGCTTCCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325954.9
CDS-3UTR TCA 90 bp GACTCAAGCCAGTCACTGAAAACAAGCTCGATCTTAGGGGTAGCAGGTCTCAGGCGTCTTCTCACTCAGTaGAAGATAGTGCAGGATGCA +
Preference number: 4 (lower is better)
Translates to: DSSQSLKTSSILGVAGLRRLLTQ*KIVQDA
Trigger: TGCATCCTGCACTATCTTTCACTGAGTGAGAAGACG...CCTGAGACCTGCTACCCCTAAGATCGAGCTTGTTTTCAGTGACTGGCTTGAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325954.9
CDS-3UTR TCA 90 bp CAGGATGCATGCCCAGCAGAAGATGTGTCCACAACGGGTTATCTTGGCTGCAGTTGGCAACAACACTCTTaGGATCCTTCTTATGCACAG +
Preference number: 4 (lower is better)
Translates to: QDACPAEDVSTTGYLGCSWQQHS*DPSYAQ
Trigger: CTGTGCATAAGAAGGATCTCAAGAGTGTTGTTGCCA...ACTGCAGCCAAGATAACCCGTTGTGGACACATCTTCTGCTGGGCATGCATCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536869.5
ENST00000538796.5
CDS-3UTR TCA 90 bp CAAGAAGAGGCAAAACCCTCCTTTCACACATGCAAGTGCCAAGGACAGCCTACTAGACTCCTCCTCCTATaGCTCAAGCCAGTCACTGAA +
Preference number: 4 (lower is better)
Translates to: QEEAKPSFHTCKCQGQPTRLLLL*LKPVTE
Trigger: TTCAGTGACTGGCTTGAGTCATAGGAGGAGGAGTCT...AGTAGGCTGTCCTTGGCACTTGCATGTGTGAAAGGAGGGTTTTGCCTCTTCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325954.9
CDS-3UTR GCA 90 bp TTGAGCCTCTGCTACCTCATCTCGTCTTCCACCATTAAAAGAAGAGCTAAAGAGGGCAGGGCTAAACTCTaGCCGTTGAGCCTCTGCTAC +
Preference number: 4 (lower is better)
Translates to: LSLCYLISSSTIKRRAKEGRAKL*PLSLCY
Trigger: GTAGCAGAGGCTCAACGGGCAGAGTTTAGCCCTGCC...CTCTTTAGCTCTTCTTTTAATGGTGGAAGACGAGATGAGGTAGCAGAGGCTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538796.5
CDS-3UTR GCA 90 bp ACAACGGGTTATCTTGGCTGCAGTAGGTGGATAGAGGCATATTGGGCAAGATGGATAGTGCAGGATGCATaGCCAGCAGAAGATGTGTCC +
Preference number: 4 (lower is better)
Translates to: TTGYLGCSRWIEAYWARWIVQDA*PAEDVS
Trigger: GGACACATCTTCTGCTGGGCATGCATCCTGCACTAT...CCATCTTGCCCAATATGCCTCTATCCACCTACTGCAGCCAAGATAACCCGTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536869.5
ENST00000538796.5
CDS-3UTR GCA 90 bp TCAAGAAGAGGCAAAACCCTCCTTTCACACATGCAAGTGCCAAGGACAGCCTACGAGCTCCTGGATAGCTaGCTCAATAAAGCAGGACTC +
Preference number: 4 (lower is better)
Translates to: SRRGKTLLSHMQVPRTAYELLDS*LNKAGL
Trigger: GAGTCCTGCTTTATTGAGGCAGCTATCCAGGAGCTC...GTAGGCTGTCCTTGGCACTTGCATGTGTGAAAGGAGGGTTTTGCCTCTTCTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325954.9
CDS-3UTR GCA 90 bp CAAGAAGAGGCAAAACCCTCCTTTCACACATGCAAGTGCCAAGGACAGCCTACTGAGACCACAGGAGGTTaGAAAGCCAGTTCACAGATG +
Preference number: 4 (lower is better)
Translates to: QEEAKPSFHTCKCQGQPTETTGG*KASSQM
Trigger: CATCTGTGAACTGGCTTTGCAACCTCCTGTGGTCTC...AGTAGGCTGTCCTTGGCACTTGCATGTGTGAAAGGAGGGTTTTGCCTCTTCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325954.9
CDS-3UTR GCA 90 bp CTGAGTCCAGGAAGCCCTGACATGATGCTACAGCAGAGCAGTGTGTGCCATTCTCATTCTGGGTTGGACTaGTCTAATGCATCTCAAAGG +
Preference number: 4 (lower is better)
Translates to: LSPGSPDMMLQQSSVCHSHSGLD*SNASQR
Trigger: CCTTTGAGATGCATTAGAGCAGTCCAACCCAGAATG...AGAATGGCACACACTGCTCTGCTGTAGCATCATGTCAGGGCTTCCTGGACTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325954.9
CDS-3UTR GCA 90 bp ATTCAGCTCAAACCAAGGCATAAGAAAACTGCTCTAGATGAGAGGGAGATGGTGATGGCCCTGCTCTCCTaGAGCTGTACCAGACTCCTC +
Preference number: 4 (lower is better)
Translates to: IQLKPRHKKTALDEREMVMALLS*SCTRLL
Trigger: GAGGAGTCTGGTACAGCTGCAGGAGAGCAGGGCCAT...CACCATCTCCCTCTCATCTAGAGCAGTTTTCTTATGCCTTGGTTTGAGCTGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325954.9
CDS-3UTR CCA 90 bp CAGGTGATTTATTGCAACTATTTGCCTTCGCATTCTAATGCACCTAGAGGTCACGACCTGCTCCGGGAATaGCGACGAGTCGCCAAACAG +
Preference number: 4 (lower is better)
Translates to: QVIYCNYLPSHSNAPRGHDLLRE*RRVAKQ
Trigger: CTGTTTGGCGACTCGTCGCCATTCCCGGAGCAGGTC...GTGACCTCTAGGTGCATTAGAATGCGAAGGCAAATAGTTGCAATAAATCACCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325954.9
CDS-3UTR CCA 90 bp GCAGAAGATGTGTCCACAACGGGTTATCTTGGCTGCAGTAGGTGGATAGAGGCAGGTTCTCGGCCTTCATaGCGACATTTTTCCCTGTTT +
Preference number: 4 (lower is better)
Translates to: AEDVSTTGYLGCSRWIEAGSRPS*RHFSLF
Trigger: AAACAGGGAAAAATGTCGCCATGAAGGCCGAGAACC...TGCCTCTATCCACCTACTGCAGCCAAGATAACCCGTTGTGGACACATCTTCTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000538796.5
CDS-3UTR CCA 90 bp CACTCAGTGAAAGATAGTGCAGGATGCATGCCCAGCAGAAGATGTGTCCACAACTGCTTTTCTGTGAACTaGAGCGACGGGACTGGTTGT +
Preference number: 4 (lower is better)
Translates to: HSVKDSAGCMPSRRCVHNCFSVN*SDGTGC
Trigger: ACAACCAGTCCCGTCGCTCCAGTTCACAGAAAAGCA...GTTGTGGACACATCTTCTGCTGGGCATGCATCCTGCACTATCTTTCACTGAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536869.5
ENST00000538796.5
CDS-3UTR CCA 90 bp CAGGATGCATGCCCAGCAGAAGATGTGTCCACAACGGGTTATCTTGGCTGCAGTTGGATAGAGGCATATTaGGCAAGATGGCACTTCATG +
Preference number: 4 (lower is better)
Translates to: QDACPAEDVSTTGYLGCSWIEAY*ARWHFM
Trigger: CATGAAGTGCCATCTTGCCCAATATGCCTCTATCCA...ACTGCAGCCAAGATAACCCGTTGTGGACACATCTTCTGCTGGGCATGCATCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536869.5
ENST00000538796.5
CDS-3UTR CCA 90 bp AAGAAGAGGCAAAACCCTCCTTTCACACATGCAAGTGCCAAGGACAGCCTACTCCTTGGCTGCAGTAGGTaGATAGAGGCATATTGGGCA +
Preference number: 4 (lower is better)
Translates to: KKRQNPPFTHASAKDSLLLGCSR*IEAYWA
Trigger: TGCCCAATATGCCTCTATCCACCTACTGCAGCCAAG...GAGTAGGCTGTCCTTGGCACTTGCATGTGTGAAAGGAGGGTTTTGCCTCTTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325954.9
CDS-3UTR CCA 90 bp CCAGGAAGCCCTGACATGATGCTACAGCAGAGCAGTGTGTGCCATTCTGGGTTGCATCTCCTAGATGAATaGGATGGTCTACATTCATCC +
Preference number: 4 (lower is better)
Translates to: PGSPDMMLQQSSVCHSGLHLLDE*DGLHSS
Trigger: GGATGAATGTAGACCATCCCATTCATCTAGGAGATG...CAACCCAGAATGGCACACACTGCTCTGCTGTAGCATCATGTCAGGGCTTCCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325954.9
CDS-3UTR CCA 90 bp GCAGTGTGTGCCATTCTGGGTTGGACTGCTCTAATGCATCTCAAAGGGGACTCATGTGCCATTCTGGGTTaGACTGCTCTAATGCATCTC +
Preference number: 4 (lower is better)
Translates to: AVCAILGWTALMHLKGDSCAILG*TALMHL
Trigger: GAGATGCATTAGAGCAGTCCAACCCAGAATGGCACA...TGAGTCCCCTTTGAGATGCATTAGAGCAGTCCAACCCAGAATGGCACACACTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325954.9
CDS-3UTR CCA 90 bp AAGAAGAGGCAAAACCCTCCTTTCACACATGCAAGTGCCAAGGACAGCCTACTCATGAGAGGGAGATGGTaGCAATGCTACCGCTTCAGA +
Preference number: 4 (lower is better)
Translates to: KKRQNPPFTHASAKDSLLMRGRW*QCYRFR
Trigger: TCTGAAGCGGTAGCATTGCCACCATCTCCCTCTCAT...GAGTAGGCTGTCCTTGGCACTTGCATGTGTGAAAGGAGGGTTTTGCCTCTTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325954.9
CDS-3UTR CCA 90 bp GCAGAAGATGTGTCCACAACGGGTTATCTTGGCTGCAGTAGGTGGATAGAGGCATCAGACACCACAAATTaGCAGCTCATCTCGTCTTCC +
Preference number: 4 (lower is better)
Translates to: AEDVSTTGYLGCSRWIEASDTTN*QLISSS
Trigger: GGAAGACGAGATGAGCTGCCAATTTGTGGTGTCTGA...TGCCTCTATCCACCTACTGCAGCCAAGATAACCCGTTGTGGACACATCTTCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536869.5
CDS-3UTR TCA 90 bp CTGAGTCCAGGAAGCCCTGACATGATGCTACAGCAGAGCAGTGTGTGCCATTCTAGCAGGTATAAGAATTaGAGGCAGGAAACTGCTGTA +
Preference number: 4 (lower is better)
Translates to: LSPGSPDMMLQQSSVCHSSRYKN*RQETAV
Trigger: TACAGCAGTTTCCTGCCTTCAATTCTTATACCTGCT...AGAATGGCACACACTGCTCTGCTGTAGCATCATGTCAGGGCTTCCTGGACTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325954.9
CDS-3UTR GCA 90 bp TTCAAACTGGGTGTCCTAAATCCATTTTATTCCCACCCCTGTTTCTTTAACAAGGCTGTTGCCCTTTGCTaGTGCCCGAAGAGGCGGAGG +
Preference number: 4 (lower is better)
Translates to: FKLGVLNPFYSHPCFFNKAVALC*CPKRRR
Trigger: CCTCCGCCTCTTCGGGCAGCAGCAAAGGGCAACAGC...CTTGTTAAAGAAACAGGGGTGGGAATAAAATGGATTTAGGACACCCAGTTTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325954.9
CDS-3UTR GCA 90 bp AAGATAGTGCAGGATGCATGCCCAGCAGAAGATGTGTCCACAACGGGTTATCTTACGGGTTATCTTGGCTaGAGTAGGTGGATAGAGGCA +
Preference number: 4 (lower is better)
Translates to: KIVQDACPAEDVSTTGYLTGYLG*SRWIEA
Trigger: TGCCTCTATCCACCTACTGCAGCCAAGATAACCCGT...AAGATAACCCGTTGTGGACACATCTTCTGCTGGGCATGCATCCTGCACTATCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536869.5
ENST00000538796.5
CDS-3UTR GCA 90 bp CAAGAAGAGGCAAAACCCTCCTTTCACACATGCAAGTGCCAAGGACAGCCTACTTTGAAGGCAGGAAACTaGTGTAGATTCTCGAGGGGA +
Preference number: 4 (lower is better)
Translates to: QEEAKPSFHTCKCQGQPTLKAGN*CRFSRG
Trigger: TCCCCTCGAGAATCTACAGCAGTTTCCTGCCTTCAA...AGTAGGCTGTCCTTGGCACTTGCATGTGTGAAAGGAGGGTTTTGCCTCTTCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325954.9
CDS-3UTR CCA 90 bp CAAGAAGAGGCAAAACCCTCCTTTCACACATGCAAGTGCCAAGGACAGCCTACTGGTTCTCGGCCTTCATaGCGACATTTTTCCCTGTTT +
Preference number: 4 (lower is better)
Translates to: QEEAKPSFHTCKCQGQPTGSRPS*RHFSLF
Trigger: AAACAGGGAAAAATGTCGCCATGAAGGCCGAGAACC...AGTAGGCTGTCCTTGGCACTTGCATGTGTGAAAGGAGGGTTTTGCCTCTTCTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325954.9
CDS-3UTR CCA 90 bp GGGCAAGATGGCACTTCATGGCTACAAATGCGCACTTGTTCCACAAAGTCCCAGCAAGATGGCACTTCATaGCTACAAATGCGCACTTGT +
Preference number: 4 (lower is better)
Translates to: GQDGTSWLQMRTCSTKSQQDGTS*LQMRTC
Trigger: ACAAGTGCGCATTTGTAGCCATGAAGTGCCATCTTG...CTGGGACTTTGTGGAACAAGTGCGCATTTGTAGCCATGAAGTGCCATCTTGCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536869.5
ENST00000538796.5
CDS-3UTR CCA 90 bp CTGAGTCCAGGAAGCCCTGACATGATGCTACAGCAGAGCAGTGTGTGCCATTCTCTACATTCATCCATTTaGATTTGGGCAAAGCCACCA +
Preference number: 4 (lower is better)
Translates to: LSPGSPDMMLQQSSVCHSLHSSI*IWAKPP
Trigger: TGGTGGCTTTGCCCAAATCCAAATGGATGAATGTAG...AGAATGGCACACACTGCTCTGCTGTAGCATCATGTCAGGGCTTCCTGGACTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325954.9
CDS-3UTR CCA 90 bp AGAGGCAAAACCCTCCTTTCACACATGCAAGTGCCAAGGACAGCCTACTCCATTCGAGTCTTGAGCTCCTaGATAGCTGCCTCAATAAAG +
Preference number: 4 (lower is better)
Translates to: RGKTLLSHMQVPRTAYSIRVLSS*IAASIK
Trigger: CTTTATTGAGGCAGCTATCCAGGAGCTCAAGACTCG...AATGGAGTAGGCTGTCCTTGGCACTTGCATGTGTGAAAGGAGGGTTTTGCCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325954.9
CDS-3UTR CCA 90 bp TTCAAACTGGGTGTCCTAAATCCATTTTATTCCCACCCCTGTTTCTTTAACAAGAGGGACTGCCCTGACTaGCAGTGGGTGACAGAGGGG +
Preference number: 4 (lower is better)
Translates to: FKLGVLNPFYSHPCFFNKRDCPD*QWVTEG
Trigger: CCCCTCTGTCACCCACTGCCAGTCAGGGCAGTCCCT...CTTGTTAAAGAAACAGGGGTGGGAATAAAATGGATTTAGGACACCCAGTTTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325954.9
CDS-3UTR CCA 90 bp GCAGAAGATGTGTCCACAACGGGTTATCTTGGCTGCAGTAGGTGGATAGAGGCACAGAGGGGCAACATATaGCCTTACTACAGAATCAAC +
Preference number: 4 (lower is better)
Translates to: AEDVSTTGYLGCSRWIEAQRGNI*PYYRIN
Trigger: GTTGATTCTGTAGTAAGGCCATATGTTGCCCCTCTG...TGCCTCTATCCACCTACTGCAGCCAAGATAACCCGTTGTGGACACATCTTCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538796.5
CDS-3UTR TCA 90 bp AGGATCAGCAAAATGAGCTGTGTAGTCTTGGTCTTCAGACACCACAAATTGGCAAGTCTTGCTTTTCTGTaGACTGGAGCGACGGGACTG +
Preference number: 4 (lower is better)
Translates to: RISKMSCVVLVFRHHKLASLAFL*TGATGL
Trigger: CAGTCCCGTCGCTCCAGTTCACAGAAAAGCAAGACT...TGCCAATTTGTGGTGTCTGAAGACCAAGACTACACAGCTCATTTTGCTGATCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000538796.5
CDS-3UTR TCA 90 bp CTGGCCACGGGGTTCAAAAGTGAAATTCAACAAGTGGTTCAGGTTGATCTTCTTCTAAACTCTGCCCGTTaGGCCTCTGCTACCTCATCT +
Preference number: 4 (lower is better)
Translates to: LATGFKSEIQQVVQVDLLLNSAR*ASATSS
Trigger: AGATGAGGTAGCAGAGGCTCAACGGGCAGAGTTTAG...AAGAAGATCAACCTGAACCACTTGTTGAATTTCACTTTTGAACCCCGTGGCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000538796.5
CDS-3UTR TCA 90 bp GCAGTGTGTGCCATTCTGGGTTGGACTGCTCTAATGCATCTCAAAGGGGACTCAAGACTAAACTGGCAATaGACTAAAAACCTTGGCAGG +
Preference number: 4 (lower is better)
Translates to: AVCAILGWTALMHLKGDSRLNWQ*TKNLGR
Trigger: CCTGCCAAGGTTTTTAGTTCATTGCCAGTTTAGTCT...TGAGTCCCCTTTGAGATGCATTAGAGCAGTCCAACCCAGAATGGCACACACTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325954.9
CDS-3UTR GCA 90 bp GAGCTGTGTAGTCTTGGTCTTCAGACACCACAAATTGGCAGTTGGCCTGTAAAAATAGTGCAGGATGCATaGCCAGCAGAAGATGTGTCC +
Preference number: 4 (lower is better)
Translates to: ELCSLGLQTPQIGSWPVKIVQDA*PAEDVS
Trigger: GGACACATCTTCTGCTGGGCATGCATCCTGCACTAT...TTTTACAGGCCAACTGCCAATTTGTGGTGTCTGAAGACCAAGACTACACAGCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000538796.5
CDS-3UTR GCA 90 bp CAGGTGATTTATTGCAACTATTTGCCTTCGCATTCTAATGCACCTAGAGGTCACTCCAGAACTACCCGGTaGAGCACCTGCTCCTTAGAG +
Preference number: 4 (lower is better)
Translates to: QVIYCNYLPSHSNAPRGHSRTTR*STCSLE
Trigger: CTCTAAGGAGCAGGTGCTGCACCGGGTAGTTCTGGA...GTGACCTCTAGGTGCATTAGAATGCGAAGGCAAATAGTTGCAATAAATCACCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325954.9
CDS-3UTR GCA 90 bp CAGGTGATTTATTGCAACTATTTGCCTTCGCATTCTAATGCACCTAGAGGTCACCAGCAGAGCAGTGTGTaGCATTCTGGGTTGGACTGC +
Preference number: 4 (lower is better)
Translates to: QVIYCNYLPSHSNAPRGHQQSSV*HSGLDC
Trigger: GCAGTCCAACCCAGAATGGCACACACTGCTCTGCTG...GTGACCTCTAGGTGCATTAGAATGCGAAGGCAAATAGTTGCAATAAATCACCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325954.9
CDS-3UTR CCA 90 bp GGTTCAAAAGTGAAATTCAACAAGTGGTTCAGGTTGATCTTCTTAGGACCAGAGAGGCGGAGGAGCTGTTaGAGCCGCTGTTCTTGTCCA +
Preference number: 4 (lower is better)
Translates to: GSKVKFNKWFRLIFLGPERRRSC*SRCSCP
Trigger: TGGACAAGAACAGCGGCTCCAACAGCTCCTCCGCCT...CTCTGGTCCTAAGAAGATCAACCTGAACCACTTGTTGAATTTCACTTTTGAACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538796.5
CDS-3UTR CCA 90 bp AAGAGGCAAAACCCTCCTTTCACACATGCAAGTGCCAAGGACAGCCTACTCCATCAAGATGGCACTTCATaGCTACAAATGCGCACTTGT +
Preference number: 4 (lower is better)
Translates to: KRQNPPFTHASAKDSLLHQDGTS*LQMRTC
Trigger: ACAAGTGCGCATTTGTAGCCATGAAGTGCCATCTTG...ATGGAGTAGGCTGTCCTTGGCACTTGCATGTGTGAAAGGAGGGTTTTGCCTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325954.9
CDS-3UTR CCA 90 bp AAGAAGAGGCAAAACCCTCCTTTCACACATGCAAGTGCCAAGGACAGCCTACTCTGGATAGAGGCATATTaGGCAAGATGGCACTTCATG +
Preference number: 4 (lower is better)
Translates to: KKRQNPPFTHASAKDSLLWIEAY*ARWHFM
Trigger: CATGAAGTGCCATCTTGCCCAATATGCCTCTATCCA...GAGTAGGCTGTCCTTGGCACTTGCATGTGTGAAAGGAGGGTTTTGCCTCTTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325954.9
CDS-3UTR CCA 90 bp AGAGGCAAAACCCTCCTTTCACACATGCAAGTGCCAAGGACAGCCTACTCCATTGAGAACAAACTTCCGTaGTTTCTTCATCGAAGGCAG +
Preference number: 4 (lower is better)
Translates to: RGKTLLSHMQVPRTAYSIENKLP*FLHRRQ
Trigger: CTGCCTTCGATGAAGAAACCACGGAAGTTTGTTCTC...AATGGAGTAGGCTGTCCTTGGCACTTGCATGTGTGAAAGGAGGGTTTTGCCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325954.9
CDS-3UTR CCA 90 bp CAAGAAGAGGCAAAACCCTCCTTTCACACATGCAAGTGCCAAGGACAGCCTACTAGGAATTTTGAAAACTaGGCACAGGAACACGGTCTG +
Preference number: 4 (lower is better)
Translates to: QEEAKPSFHTCKCQGQPTRNFEN*AQEHGL
Trigger: CAGACCGTGTTCCTGTGCCCAGTTTTCAAAATTCCT...AGTAGGCTGTCCTTGGCACTTGCATGTGTGAAAGGAGGGTTTTGCCTCTTCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000325954.9
CDS-3UTR TCA 90 bp CACTCAGTGAAAGATAGTGCAGGATGCATGCCCAGCAGAAGATGTGTCCACAACCACGGGGTTCAAAAGTaGAATTCAACAAGTGGTTCA +
Preference number: 4 (lower is better)
Translates to: HSVKDSAGCMPSRRCVHNHGVQK*NSTSGS
Trigger: TGAACCACTTGTTGAATTTCACTTTTGAACCCCGTG...GTTGTGGACACATCTTCTGCTGGGCATGCATCCTGCACTATCTTTCACTGAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000538796.5
CDS-3UTR TCA 90 bp AAGAAGAGGCAAAACCCTCCTTTCACACATGCAAGTGCCAAGGACAGCCTACTCTGTTCATCTCCTAGATaGATGGGATGGTCTACATTC +
Preference number: 4 (lower is better)
Translates to: KKRQNPPFTHASAKDSLLCSSPR*MGWSTF
Trigger: GAATGTAGACCATCCCATTCATCTAGGAGATGAACA...GAGTAGGCTGTCCTTGGCACTTGCATGTGTGAAAGGAGGGTTTTGCCTCTTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325954.9
CDS-3UTR GCA 90 bp TTCAAACTGGGTGTCCTAAATCCATTTTATTCCCACCCCTGTTTCTTTAACAAGGGCAGGGCTAAACTCTaGCCGTTGAGCCTCTGCTAC +
Preference number: 4 (lower is better)
Translates to: FKLGVLNPFYSHPCFFNKGRAKL*PLSLCY
Trigger: GTAGCAGAGGCTCAACGGGCAGAGTTTAGCCCTGCC...CTTGTTAAAGAAACAGGGGTGGGAATAAAATGGATTTAGGACACCCAGTTTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325954.9
CDS-3UTR GCA 90 bp TTGAGCCTCTGCTACCTCATCTCGTCTTCCACCATTAAAAGAAGAGCTAAAGAGAGCTACCATGTCCACTaGCTTCAAAGTGACCCGTCT +
Preference number: 4 (lower is better)
Translates to: LSLCYLISSSTIKRRAKESYHVH*LQSDPS
Trigger: AGACGGGTCACTTTGAAGGCAGTGGACATGGTAGCT...CTCTTTAGCTCTTCTTTTAATGGTGGAAGACGAGATGAGGTAGCAGAGGCTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538796.5
CDS-3UTR GCA 90 bp ATTCAGCTCAAACCAAGGCATAAGAAAACTGCTCTAGATGAGAGGGAGATGGTGACGGGTTATCTTGGCTaGAGTAGGTGGATAGAGGCA +
Preference number: 4 (lower is better)
Translates to: IQLKPRHKKTALDEREMVTGYLG*SRWIEA
Trigger: TGCCTCTATCCACCTACTGCAGCCAAGATAACCCGT...CACCATCTCCCTCTCATCTAGAGCAGTTTTCTTATGCCTTGGTTTGAGCTGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325954.9
CDS-3UTR GCA 90 bp ATTCAGCTCAAACCAAGGCATAAGAAAACTGCTCTAGATGAGAGGGAGATGGTGATAGTGCAGGATGCATaGCCAGCAGAAGATGTGTCC +
Preference number: 4 (lower is better)
Translates to: IQLKPRHKKTALDEREMVIVQDA*PAEDVS
Trigger: GGACACATCTTCTGCTGGGCATGCATCCTGCACTAT...CACCATCTCCCTCTCATCTAGAGCAGTTTTCTTATGCCTTGGTTTGAGCTGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325954.9
CDS-3UTR CCA 90 bp CAAGAAGAGGCAAAACCCTCCTTTCACACATGCAAGTGCCAAGGACAGCCTACTTGCGATTATAACGCTTaGATCCACTGGAGTTCTTTC +
Preference number: 4 (lower is better)
Translates to: QEEAKPSFHTCKCQGQPTCDYNA*IHWSSF
Trigger: GAAAGAACTCCAGTGGATCCAAGCGTTATAATCGCA...AGTAGGCTGTCCTTGGCACTTGCATGTGTGAAAGGAGGGTTTTGCCTCTTCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325954.9
CDS-3UTR CCA 90 bp TCTCACTCAGTGAAAGATAGTGCAGGATGCATGCCCAGCAGAAGATGTGTCCACCTGGAGCGACGGGACTaGTTGTTAAAACTTTCATTT +
Preference number: 4 (lower is better)
Translates to: SHSVKDSAGCMPSRRCVHLERRD*LLKLSF
Trigger: AAATGAAAGTTTTAACAACCAGTCCCGTCGCTCCAG...GTGGACACATCTTCTGCTGGGCATGCATCCTGCACTATCTTTCACTGAGTGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536869.5
ENST00000538796.5
CDS-3UTR CCA 90 bp AAGAAGAGGCAAAACCCTCCTTTCACACATGCAAGTGCCAAGGACAGCCTACTCCCACAAATTGGCAGTTaGCCTGTAAAAAGAGTTCCT +
Preference number: 4 (lower is better)
Translates to: KKRQNPPFTHASAKDSLLPQIGS*PVKRVP
Trigger: AGGAACTCTTTTTACAGGCCAACTGCCAATTTGTGG...GAGTAGGCTGTCCTTGGCACTTGCATGTGTGAAAGGAGGGTTTTGCCTCTTCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325954.9
CDS-3UTR CCA 90 bp AAGAAGAGGCAAAACCCTCCTTTCACACATGCAAGTGCCAAGGACAGCCTACTCGCATATTGGGCAAGATaGCACTTCATGGCTACAAAT +
Preference number: 4 (lower is better)
Translates to: KKRQNPPFTHASAKDSLLAYWAR*HFMATN
Trigger: ATTTGTAGCCATGAAGTGCCATCTTGCCCAATATGC...GAGTAGGCTGTCCTTGGCACTTGCATGTGTGAAAGGAGGGTTTTGCCTCTTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325954.9
CDS-3UTR CCA 90 bp AAGATAGTGCAGGATGCATGCCCAGCAGAAGATGTGTCCACAACGGGTTATCTTTGGATAGAGGCATATTaGGCAAGATGGCACTTCATG +
Preference number: 4 (lower is better)
Translates to: KIVQDACPAEDVSTTGYLWIEAY*ARWHFM
Trigger: CATGAAGTGCCATCTTGCCCAATATGCCTCTATCCA...AAGATAACCCGTTGTGGACACATCTTCTGCTGGGCATGCATCCTGCACTATCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536869.5
ENST00000538796.5
CDS-3UTR CCA 90 bp AGGATCAGCAAAATGAGCTGTGTAGTCTTGGTCTTCAGACACCACAAATTGGCACTTGGCTGCAGTAGGTaGATAGAGGCATATTGGGCA +
Preference number: 4 (lower is better)
Translates to: RISKMSCVVLVFRHHKLALGCSR*IEAYWA
Trigger: TGCCCAATATGCCTCTATCCACCTACTGCAGCCAAG...TGCCAATTTGTGGTGTCTGAAGACCAAGACTACACAGCTCATTTTGCTGATCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538796.5
CDS-3UTR TCA 90 bp CATCAAATTCAGCTCAAACCAAGGCATAAGAAAACTGCTCTAGATGAGAGGGAGGCCTTCTTTTGGCGCTaGCGTTTCCTCTTCTCAATG +
Preference number: 4 (lower is better)
Translates to: HQIQLKPRHKKTALDEREAFFWR*RFLFSM
Trigger: CATTGAGAAGAGGAAACGTCAGCGCCAAAAGAAGGC...CTCCCTCTCATCTAGAGCAGTTTTCTTATGCCTTGGTTTGAGCTGAATTTGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325954.9
CDS-3UTR GCA 90 bp GTGAAAGATAGTGCAGGATGCATGCCCAGCAGAAGATGTGTCCACAACGGGTTAAGGAAAGTTCACGTTTaGGATTATAACGCTTGGATC +
Preference number: 4 (lower is better)
Translates to: VKDSAGCMPSRRCVHNGLRKVHV*DYNAWI
Trigger: GATCCAAGCGTTATAATCGCAAACGTGAACTTTCCT...TAACCCGTTGTGGACACATCTTCTGCTGGGCATGCATCCTGCACTATCTTTCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536869.5
ENST00000538796.5
CDS-3UTR GCA 90 bp ATTCAGCTCAAACCAAGGCATAAGAAAACTGCTCTAGATGAGAGGGAGATGGTGGGACTTCTGGGTACTTaGCCTGTTTCTTGTTCTCCT +
Preference number: 4 (lower is better)
Translates to: IQLKPRHKKTALDEREMVGLLGT*PVSCSP
Trigger: AGGAGAACAAGAAACAGGGCAAGTACCCAGAAGTCC...CACCATCTCCCTCTCATCTAGAGCAGTTTTCTTATGCCTTGGTTTGAGCTGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325954.9
CDS-3UTR GCA 90 bp CATCAAATTCAGCTCAAACCAAGGCATAAGAAAACTGCTCTAGATGAGAGGGAGGGTCAGCAGAAAGTCTaGATGGGAACCTGGACTTCT +
Preference number: 4 (lower is better)
Translates to: HQIQLKPRHKKTALDEREGQQKV*MGTWTS
Trigger: AGAAGTCCAGGTTCCCATGCAGACTTTCTGCTGACC...CTCCCTCTCATCTAGAGCAGTTTTCTTATGCCTTGGTTTGAGCTGAATTTGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325954.9
CDS-3UTR GCA 90 bp AAGAGGCAAAACCCTCCTTTCACACATGCAAGTGCCAAGGACAGCCTACTCCATGTGCAGGTGATTTATTaGAACTATTTGCCTTCGCAT +
Preference number: 4 (lower is better)
Translates to: KRQNPPFTHASAKDSLLHVQVIY*NYLPSH
Trigger: ATGCGAAGGCAAATAGTTGCAATAAATCACCTGCAC...ATGGAGTAGGCTGTCCTTGGCACTTGCATGTGTGAAAGGAGGGTTTTGCCTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325954.9
CDS-3UTR CCA 90 bp GACATTTACTCCACGTCTTCTCACTCAGTGAAAGATAGTGCAGGATGCATGCCCCTGGAGCGACGGGACTaGTTGTTAAAACTTTCATTT +
Preference number: 4 (lower is better)
Translates to: DIYSTSSHSVKDSAGCMPLERRD*LLKLSF
Trigger: AAATGAAAGTTTTAACAACCAGTCCCGTCGCTCCAG...GGGCATGCATCCTGCACTATCTTTCACTGAGTGAGAAGACGTGGAGTAAATGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536869.5
ENST00000538796.5
CDS-3UTR CCA 90 bp GACATTTACTCCACGTCTTCTCACTCAGTGAAAGATAGTGCAGGATGCATGCCCCCACAAATTGGCAGTTaGCCTGTAAAAAGAGTTCCT +
Preference number: 4 (lower is better)
Translates to: DIYSTSSHSVKDSAGCMPPQIGS*PVKRVP
Trigger: AGGAACTCTTTTTACAGGCCAACTGCCAATTTGTGG...GGGCATGCATCCTGCACTATCTTTCACTGAGTGAGAAGACGTGGAGTAAATGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000538796.5
CDS-3UTR CCA 90 bp CATCAAATTCAGCTCAAACCAAGGCATAAGAAAACTGCTCTAGATGAGAGGGAGCCAGCACACCCTTCCTaGGTTGAAAAACAGACTCCT +
Preference number: 4 (lower is better)
Translates to: HQIQLKPRHKKTALDEREPAHPS*VEKQTP
Trigger: AGGAGTCTGTTTTTCAACCCAGGAAGGGTGTGCTGG...CTCCCTCTCATCTAGAGCAGTTTTCTTATGCCTTGGTTTGAGCTGAATTTGATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325954.9
CDS-3UTR TCA 90 bp AACTTTCATTTTTGGGGTAGGAAAGTTCACGTTTGCGATTATAACGCTTGGATCATCATCCAGAGTAGTTaGCAAGCACCTCCAGAGGGG +
Preference number: 4 (lower is better)
Translates to: NFHFWGRKVHVCDYNAWIIIQSS*QAPPEG
Trigger: CCCCTCTGGAGGTGCTTGTCAACTACTCTGGATGAT...GATCCAAGCGTTATAATCGCAAACGTGAACTTTCCTACCCCAAAAATGAAAGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000538796.5
CDS-3UTR GCA 90 bp GACATTTACTCCACGTCTTCTCACTCAGTGAAAGATAGTGCAGGATGCATGCCCAGGAAAGTTCACGTTTaGGATTATAACGCTTGGATC +
Preference number: 4 (lower is better)
Translates to: DIYSTSSHSVKDSAGCMPRKVHV*DYNAWI
Trigger: GATCCAAGCGTTATAATCGCAAACGTGAACTTTCCT...GGGCATGCATCCTGCACTATCTTTCACTGAGTGAGAAGACGTGGAGTAAATGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536869.5
ENST00000538796.5
CDS-3UTR GCA 90 bp ATGCGCACTTGTTCCACAAAGTCCCAGTTAACTAATGTATCAGGATCAGCAAAAACGGGTTATCTTGGCTaGAGTAGGTGGATAGAGGCA +
Preference number: 4 (lower is better)
Translates to: MRTCSTKSQLTNVSGSAKTGYLG*SRWIEA
Trigger: TGCCTCTATCCACCTACTGCAGCCAAGATAACCCGT...TTTTGCTGATCCTGATACATTAGTTAACTGGGACTTTGTGGAACAAGTGCGCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000536869.5
ENST00000538796.5
CDS-3UTR GCA 90 bp ATTCAGCTCAAACCAAGGCATAAGAAAACTGCTCTAGATGAGAGGGAGATGGTGTACCAACTCAAGCCATaGTCAAGAAGAGGCAAAACC +
Preference number: 4 (lower is better)
Translates to: IQLKPRHKKTALDEREMVYQLKP*SRRGKT
Trigger: GGTTTTGCCTCTTCTTGAGCATGGCTTGAGTTGGTA...CACCATCTCCCTCTCATCTAGAGCAGTTTTCTTATGCCTTGGTTTGAGCTGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325954.9
CDS-3UTR CCA 90 bp CAGAACTGTAACAGATGGGACATTTACTCCACGTCTTCTCACTCAGTGAAAGATAACGCTTGGATCCACTaGAGTTCTTTCCATCGCTCT +
Preference number: 4 (lower is better)
Translates to: QNCNRWDIYSTSSHSVKDNAWIH*SSFHRS
Trigger: AGAGCGATGGAAAGAACTCCAGTGGATCCAAGCGTT...ATCTTTCACTGAGTGAGAAGACGTGGAGTAAATGTCCCATCTGTTACAGTTCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536869.5
CDS-3UTR CCA 90 bp GAGCTGTGTAGTCTTGGTCTTCAGACACCACAAATTGGCAGTTGGCCTGTAAAAGCATATTGGGCAAGATaGCACTTCATGGCTACAAAT +
Preference number: 4 (lower is better)
Translates to: ELCSLGLQTPQIGSWPVKAYWAR*HFMATN
Trigger: ATTTGTAGCCATGAAGTGCCATCTTGCCCAATATGC...TTTTACAGGCCAACTGCCAATTTGTGGTGTCTGAAGACCAAGACTACACAGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538796.5
CDS-3UTR TCA 90 bp CTACAAATGCGCACTTGTTCCACAAAGTCCCAGTTAACTAATGTATCAGGATCACGTCTTCTCACTCAGTaGAAGATAGTGCAGGATGCA +
Preference number: 4 (lower is better)
Translates to: LQMRTCSTKSQLTNVSGSRLLTQ*KIVQDA
Trigger: TGCATCCTGCACTATCTTTCACTGAGTGAGAAGACG...TGATCCTGATACATTAGTTAACTGGGACTTTGTGGAACAAGTGCGCATTTGTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536869.5
ENST00000538796.5
CDS-3UTR TCA 90 bp ATGCGCACTTGTTCCACAAAGTCCCAGTTAACTAATGTATCAGGATCAGCAAAACGTCTTCTCACTCAGTaGAAGATAGTGCAGGATGCA +
Preference number: 4 (lower is better)
Translates to: MRTCSTKSQLTNVSGSAKRLLTQ*KIVQDA
Trigger: TGCATCCTGCACTATCTTTCACTGAGTGAGAAGACG...TTTTGCTGATCCTGATACATTAGTTAACTGGGACTTTGTGGAACAAGTGCGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536869.5
ENST00000538796.5
CDS-3UTR GCA 90 bp AAGAGGCAAAACCCTCCTTTCACACATGCAAGTGCCAAGGACAGCCTACTCCATTTTATTGCAACTATTTaGCTTCGCATTCTAATGCAC +
Preference number: 4 (lower is better)
Translates to: KRQNPPFTHASAKDSLLHFIATI*LRILMH
Trigger: GTGCATTAGAATGCGAAGGCAAATAGTTGCAATAAA...ATGGAGTAGGCTGTCCTTGGCACTTGCATGTGTGAAAGGAGGGTTTTGCCTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325954.9
CDS-3UTR CCA 90 bp AACTTTCATTTTTGGGGTAGGAAAGTTCACGTTTGCGATTATAACGCTTGGATCTGCTTTTCTGTGAACTaGAGCGACGGGACTGGTTGT +
Preference number: 4 (lower is better)
Translates to: NFHFWGRKVHVCDYNAWICFSVN*SDGTGC
Trigger: ACAACCAGTCCCGTCGCTCCAGTTCACAGAAAAGCA...GATCCAAGCGTTATAATCGCAAACGTGAACTTTCCTACCCCAAAAATGAAAGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000538796.5
CDS-3UTR CCA 90 bp GCCTTCAAAGTGACCCGTCTGGCCACGGGGTTCAAAAGTGAAATTCAACAAGTGGTGAAATTCAACAAGTaGTTCAGGTTGATCTTCTTA +
Preference number: 4 (lower is better)
Translates to: AFKVTRLATGFKSEIQQVVKFNK*FRLIFL
Trigger: TAAGAAGATCAACCTGAACCACTTGTTGAATTTCAC...CACTTGTTGAATTTCACTTTTGAACCCCGTGGCCAGACGGGTCACTTTGAAGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000538796.5
CDS-3UTR CCA 90 bp CATCAAATTCAGCTCAAACCAAGGCATAAGAAAACTGCTCTAGATGAGAGGGAGGTTCTCATCTTTCTTTaGAGCAGTTTTGGGCCACAC +
Preference number: 4 (lower is better)
Translates to: HQIQLKPRHKKTALDEREVLIFL*SSFGPH
Trigger: GTGTGGCCCAAAACTGCTCCAAAGAAAGATGAGAAC...CTCCCTCTCATCTAGAGCAGTTTTCTTATGCCTTGGTTTGAGCTGAATTTGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325954.9
CDS-3UTR TCA 90 bp ACTTTCATTTTTGGGGTAGGAAAGTTCACGTTTGCGATTATAACGCTTGGATCCTGGCAACAACACTCTTaGGATCCTTCTTATGCACAG +
Preference number: 4 (lower is better)
Translates to: TFIFGVGKFTFAIITLGSWQQHS*DPSYAQ
Trigger: CTGTGCATAAGAAGGATCTCAAGAGTGTTGTTGCCA...GGATCCAAGCGTTATAATCGCAAACGTGAACTTTCCTACCCCAAAAATGAAAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000538796.5
CDS-3UTR CCA 90 bp CATCAAATTCAGCTCAAACCAAGGCATAAGAAAACTGCTCTAGATGAGAGGGAGCTGGAGCGACGGGACTaGTTGTTAAAACTTTCATTT +
Preference number: 4 (lower is better)
Translates to: HQIQLKPRHKKTALDERELERRD*LLKLSF
Trigger: AAATGAAAGTTTTAACAACCAGTCCCGTCGCTCCAG...CTCCCTCTCATCTAGAGCAGTTTTCTTATGCCTTGGTTTGAGCTGAATTTGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325954.9
CDS-3UTR CCA 90 bp GGTTCAAAAGTGAAATTCAACAAGTGGTTCAGGTTGATCTTCTTAGGACCAGAGAACGCTTGGATCCACTaGAGTTCTTTCCATCCATCA +
Preference number: 4 (lower is better)
Translates to: GSKVKFNKWFRLIFLGPENAWIH*SSFHPS
Trigger: TGATGGATGGAAAGAACTCCAGTGGATCCAAGCGTT...CTCTGGTCCTAAGAAGATCAACCTGAACCACTTGTTGAATTTCACTTTTGAACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538796.5
CDS-3UTR GCA 90 bp CATCAAATTCAGCTCAAACCAAGGCATAAGAAAACTGCTCTAGATGAGAGGGAGAGGAAAGTTCACGTTTaGGATTATAACGCTTGGATC +
Preference number: 4 (lower is better)
Translates to: HQIQLKPRHKKTALDERERKVHV*DYNAWI
Trigger: GATCCAAGCGTTATAATCGCAAACGTGAACTTTCCT...CTCCCTCTCATCTAGAGCAGTTTTCTTATGCCTTGGTTTGAGCTGAATTTGATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325954.9
CDS-3UTR CCA 90 bp TCATGGCTACAAATGCGCACTTGTTCCACAAAGTCCCAGTTAACTAATGTATCATGCGATTATAACGCTTaGATCCACTGGAGTTCTTTC +
Preference number: 4 (lower is better)
Translates to: SWLQMRTCSTKSQLTNVSCDYNA*IHWSSF
Trigger: GAAAGAACTCCAGTGGATCCAAGCGTTATAATCGCA...TGATACATTAGTTAACTGGGACTTTGTGGAACAAGTGCGCATTTGTAGCCATGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536869.5
ENST00000538796.5
CDS-3UTR CCA 90 bp CTACAAATGCGCACTTGTTCCACAAAGTCCCAGTTAACTAATGTATCAGGATCATGCGATTATAACGCTTaGATCCACTGGAGTTCTTTC +
Preference number: 4 (lower is better)
Translates to: LQMRTCSTKSQLTNVSGSCDYNA*IHWSSF
Trigger: GAAAGAACTCCAGTGGATCCAAGCGTTATAATCGCA...TGATCCTGATACATTAGTTAACTGGGACTTTGTGGAACAAGTGCGCATTTGTAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536869.5
ENST00000538796.5
CDS-3UTR CCA 90 bp TCATGGCTACAAATGCGCACTTGTTCCACAAAGTCCCAGTTAACTAATGTATCAGCATATTGGGCAAGATaGCACTTCATGGCTACAAAT +
Preference number: 4 (lower is better)
Translates to: SWLQMRTCSTKSQLTNVSAYWAR*HFMATN
Trigger: ATTTGTAGCCATGAAGTGCCATCTTGCCCAATATGC...TGATACATTAGTTAACTGGGACTTTGTGGAACAAGTGCGCATTTGTAGCCATGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536869.5
ENST00000538796.5
CDS-3UTR CCA 90 bp TCATGGCTACAAATGCGCACTTGTTCCACAAAGTCCCAGTTAACTAATGTATCACAGAACTGTAACAGATaGGACATTTACTCCACGTCT +
Preference number: 4 (lower is better)
Translates to: SWLQMRTCSTKSQLTNVSQNCNR*DIYSTS
Trigger: AGACGTGGAGTAAATGTCCCATCTGTTACAGTTCTG...TGATACATTAGTTAACTGGGACTTTGTGGAACAAGTGCGCATTTGTAGCCATGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536869.5
ENST00000538796.5
CDS-3UTR CCA 90 bp ACTTTCATTTTTGGGGTAGGAAAGTTCACGTTTGCGATTATAACGCTTGGATCCCAGAACTGTAACAGATaGGACATTTACTCCACGTCT +
Preference number: 4 (lower is better)
Translates to: TFIFGVGKFTFAIITLGSQNCNR*DIYSTS
Trigger: AGACGTGGAGTAAATGTCCCATCTGTTACAGTTCTG...GGATCCAAGCGTTATAATCGCAAACGTGAACTTTCCTACCCCAAAAATGAAAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000538796.5
CDS-3UTR CCA 90 bp CAGGTGATTTATTGCAACTATTTGCCTTCGCATTCTAATGCACCTAGAGGTCACGTGAAATTCAACAAGTaGTTCAGGTTGATCTTCTTA +
Preference number: 4 (lower is better)
Translates to: QVIYCNYLPSHSNAPRGHVKFNK*FRLIFL
Trigger: TAAGAAGATCAACCTGAACCACTTGTTGAATTTCAC...GTGACCTCTAGGTGCATTAGAATGCGAAGGCAAATAGTTGCAATAAATCACCTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325954.9
CDS CCA 90 bp CGACGGCAGTCGGAGCGGAGCGGGCGCGGCGGGGACCCAGGCTCATaGCGTTCAGGGCCGGCGGGGGTCGGCGGCGGCAGCGGTTCTCGG +
Preference number: 5 (lower is better)
Translates to: RRQSERSGRGGDPGS*RSGPAGVGGGSGSR
Trigger: CCGAGAACCGCTGCCGCCGCCGACCCCCGCCGGCCCTGAACGCCATGAGCCTGGGTCCCCGCCGCGCCCGCTCCGCTCCGACTGCCGTCG
80% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000325954.9
ENST00000538796.5
ENST00000539486.1
ENST00000542438.1
CDS GCA 90 bp TTAGACTCGCCGGCTGGCCCCGCCGAGGCGGAGCGGGGCGGCTGTTaGCCTTTGCTGCTGCCCGAAGAGGCGGAGGAGCTGTTGGAGCCG +
Preference number: 5 (lower is better)
Translates to: LDSPAGPAEAERGGC*PLLLPEEAEELLEP
Trigger: CGGCTCCAACAGCTCCTCCGCCTCTTCGGGCAGCAGCAAAGGGCAACAGCCGCCCCGCTCCGCCTCGGCGGGGCCAGCCGGCGAGTCTAA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000325954.9
ENST00000413266.6
ENST00000538796.5
ENST00000542438.1
ENST00000551139.6
CDS CCA 90 bp CGGCCGGCCGGACACGCTCTCCCGCCGCGAGGCAGGGGAGAGGGCTaGCTGTCTCGGTGTCGGGGACTAGTGTCTCCGACACAGCAACGG +
Preference number: 5 (lower is better)
Translates to: RPAGHALPPRGRGEG*LSRCRGLVSPTQQR
Trigger: CCGTTGCTGTGTCGGAGACACTAGTCCCCGACACCGAGACAGCCAGCCCTCTCCCCTGCCTCGCGGCGGGAGAGCGTGTCCGGCCGGCCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325954.9
CDS CCA 90 bp GCGGCTGTTGCCCTTTGCTGCTGCCCGAAGAGGCGGAGGAGCTGTTaGAGCCGCTGTTCTTGTCCATGTCGGAGGCGGTGGCGGCGGCGT +
Preference number: 5 (lower is better)
Translates to: AAVALCCCPKRRRSC*SRCSCPCRRRWRRR
Trigger: ACGCCGCCGCCACCGCCTCCGACATGGACAAGAACAGCGGCTCCAACAGCTCCTCCGCCTCTTCGGGCAGCAGCAAAGGGCAACAGCCGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325954.9
ENST00000413266.6
ENST00000538796.5
ENST00000542438.1
CDS CCA 90 bp GTGTCGGGGACTAGTGTCTCCGACACAGCAACGGATACTCGCCCCTaGGCCGAGGCCGACCTGCTCCGGGAATGGCGACGAGTCGCCAAA +
Preference number: 5 (lower is better)
Translates to: VSGTSVSDTATDTRP*AEADLLREWRRVAK
Trigger: TTTGGCGACTCGTCGCCATTCCCGGAGCAGGTCGGCCTCGGCCCAGGGGCGAGTATCCGTTGCTGTGTCGGAGACACTAGTCCCCGACAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325954.9
CDS-3UTR CAA 90 bp GGCCCTGCTCTCCTGCAGCTGTACCAGACTCCTCCTCCTATGACTCAAGCCAGTGGAGCGGGGCGGCTGTaGCCCTTTGCTGCTGCCCGA +
Preference number: 5 (lower is better)
Translates to: GPALLQLYQTPPPMTQASGAGRL*PFAAAR
Trigger: TCGGGCAGCAGCAAAGGGCAACAGCCGCCCCGCTCC...ACTGGCTTGAGTCATAGGAGGAGGAGTCTGGTACAGCTGCAGGAGAGCAGGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325954.9
CDS CCA 90 bp TCAGGGCCGGCGGGGGTCGGCGGCGGCAGCGGTTCTCGGCCTTCATaGCGACATTTTTCCCTGTTTCCTTCCTTGGCTTCTCAAACCCTG +
Preference number: 5 (lower is better)
Translates to: SGPAGVGGGSGSRPS*RHFSLFPSLASQTL
Trigger: CAGGGTTTGAGAAGCCAAGGAAGGAAACAGGGAAAAATGTCGCCATGAAGGCCGAGAACCGCTGCCGCCGCCGACCCCCGCCGGCCCTGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000542438.1
CDS-3UTR CAA 90 bp GGCCCTGCTCTCCTGCAGCTGTACCAGACTCCTCCTCCTATGACTCAAGCCAGTGGCGGCTGTTGCCCTTaGCTGCTGCCCGAAGAGGCG +
Preference number: 5 (lower is better)
Translates to: GPALLQLYQTPPPMTQASGGCCP*LLPEEA
Trigger: CGCCTCTTCGGGCAGCAGCAAAGGGCAACAGCCGCC...ACTGGCTTGAGTCATAGGAGGAGGAGTCTGGTACAGCTGCAGGAGAGCAGGGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325954.9
CDS CCA 90 bp TCAGGGCCGGCGGGGGTCGGCGGCGGCAGCGGTTCTCGGCCTTCATaGCGACATTTTTCCCTGTTTCCTTCCTTGGCTTCTCAAACTAGG +
Preference number: 5 (lower is better)
Translates to: SGPAGVGGGSGSRPS*RHFSLFPSLASQTR
Trigger: CCTAGTTTGAGAAGCCAAGGAAGGAAACAGGGAAAAATGTCGCCATGAAGGCCGAGAACCGCTGCCGCCGCCGACCCCCGCCGGCCCTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000325954.9
ENST00000538796.5
CDS GCA 90 bp TCCAGGCTGCCGTACTCCCGCACGAGGCAGCGCACATTCACAGGGTaGAGGAACATATGCTGTCCATCTTCCGCTGAGGACAAGGGGCTC +
Preference number: 5 (lower is better)
Translates to: SRLPYSRTRQRTFTG*RNICCPSSAEDKGL
Trigger: GAGCCCCTTGTCCTCAGCGGAAGATGGACAGCATATGTTCCTGCACCCTGTGAATGTGCGCTGCCTCGTGCGGGAGTACGGCAGCCTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535395.1
CDS-3UTR CAA 90 bp GGCCCTGCTCTCCTGCAGCTGTACCAGACTCCTCCTCCTATGACTCAAGCCAGTTTGGAGCCGCTGTTCTaGTCCATGTCGGAGGCGGTG +
Preference number: 5 (lower is better)
Translates to: GPALLQLYQTPPPMTQASLEPLF*SMSEAV
Trigger: CACCGCCTCCGACATGGACAAGAACAGCGGCTCCAA...ACTGGCTTGAGTCATAGGAGGAGGAGTCTGGTACAGCTGCAGGAGAGCAGGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325954.9
CDS-3UTR CAA 90 bp TCTCACTCAGTGAAAGATAGTGCAGGATGCATGCCCAGCAGAAGATGTGTCCACGGAGCGGGGCGGCTGTaGCCCTTTGCTGCTGCCCGA +
Preference number: 5 (lower is better)
Translates to: SHSVKDSAGCMPSRRCVHGAGRL*PFAAAR
Trigger: TCGGGCAGCAGCAAAGGGCAACAGCCGCCCCGCTCC...GTGGACACATCTTCTGCTGGGCATGCATCCTGCACTATCTTTCACTGAGTGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536869.5
ENST00000538796.5
CDS-3UTR CAA 90 bp CACTCAGTGAAAGATAGTGCAGGATGCATGCCCAGCAGAAGATGTGTCCACAACGGAGCGGGGCGGCTGTaGCCCTTTGCTGCTGCCCGA +
Preference number: 5 (lower is better)
Translates to: HSVKDSAGCMPSRRCVHNGAGRL*PFAAAR
Trigger: TCGGGCAGCAGCAAAGGGCAACAGCCGCCCCGCTCC...GTTGTGGACACATCTTCTGCTGGGCATGCATCCTGCACTATCTTTCACTGAGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536869.5
ENST00000538796.5
CDS GCA 90 bp GCCAGCTGCTGCTCTAGTGCTACTTTCTCCTCCAGAACTACCCGGTaGAGCACCTGCTCCTTAGAGGCCAGCAGCAACTTGGAGTACTGG +
Preference number: 5 (lower is better)
Translates to: ASCCSSATFSSRTTR*STCSLEASSNLEYW
Trigger: CCAGTACTCCAAGTTGCTGCTGGCCTCTAAGGAGCAGGTGCTGCACCGGGTAGTTCTGGAGGAGAAAGTAGCACTAGAGCAGCAGCTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325954.9
ENST00000413266.6
ENST00000537740.1
ENST00000542207.5
ENST00000543675.5
CDS-3UTR CAA 90 bp CCTGACATGATGCTACAGCAGAGCAGTGTGTGCCATTCTGGGTTGGACTGCTCTGAGGCGGAGGAGCTGTaGGAGCCGCTGTTCTTGTCC +
Preference number: 5 (lower is better)
Translates to: PDMMLQQSSVCHSGLDCSEAEEL*EPLFLS
Trigger: GGACAAGAACAGCGGCTCCAACAGCTCCTCCGCCTC...AGAGCAGTCCAACCCAGAATGGCACACACTGCTCTGCTGTAGCATCATGTCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325954.9
CDS-3UTR CAA 90 bp GTGAAAGATAGTGCAGGATGCATGCCCAGCAGAAGATGTGTCCACAACGGGTTAGGCGGCTGTTGCCCTTaGCTGCTGCCCGAAGAGGCG +
Preference number: 5 (lower is better)
Translates to: VKDSAGCMPSRRCVHNGLGGCCP*LLPEEA
Trigger: CGCCTCTTCGGGCAGCAGCAAAGGGCAACAGCCGCC...TAACCCGTTGTGGACACATCTTCTGCTGGGCATGCATCCTGCACTATCTTTCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536869.5
ENST00000538796.5
CDS-3UTR CAA 90 bp CCTGCTCTCCTGCAGCTGTACCAGACTCCTCCTCCTATGACTCAAGCCAGTCACGAAGAGCTAAAGAGTTaGCTGCTGCCGCCGCCCCTT +
Preference number: 5 (lower is better)
Translates to: PALLQLYQTPPPMTQASHEELKS*LLPPPL
Trigger: AAGGGGCGGCGGCAGCAGCAAACTCTTTAGCTCTTC...GTGACTGGCTTGAGTCATAGGAGGAGGAGTCTGGTACAGCTGCAGGAGAGCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325954.9
CDS TCA 90 bp GCGCACATTCACAGGGTGCAGGAACATATGCTGTCCATCTTCCGCTaGGGACAAGGGGCTCTATCACACACCAGTCTTGGCCAGTCCCCA +
Preference number: 5 (lower is better)
Translates to: AHIHRVQEHMLSIFR*GQGALSHTSLGQSP
Trigger: TGGGGACTGGCCAAGACTGGTGTGTGATAGAGCCCCTTGTCCTCAGCGGAAGATGGACAGCATATGTTCCTGCACCCTGTGAATGTGCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535395.1
CDS GCA 90 bp GTCATCACAGGCCTCTGGCAACCCCTCAGGCTCTGGTTCAGACACTaGTTCCTCCTCTTCTACCAGAGGGAGAGCAAGAGGTCTAGAAGG +
Preference number: 5 (lower is better)
Translates to: VITGLWQPLRLWFRH*FLLFYQRESKRSRR
Trigger: CCTTCTAGACCTCTTGCTCTCCCTCTGGTAGAAGAGGAGGAAGCAGTGTCTGAACCAGAGCCTGAGGGGTTGCCAGAGGCCTGTGATGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325954.9
ENST00000413266.6
ENST00000544124.1
CDS GCA 90 bp CTTCTGGGTACTTGCCCTGTTTCTTGTTCTCCTCTATCTCAATCCTaGGCTCTCGGCGGCGTTCCTCCCGAGCCTTCTTTTGGCGCTGAC +
Preference number: 5 (lower is better)
Translates to: LLGTCPVSCSPLSQS*ALGGVPPEPSFGAD
Trigger: GTCAGCGCCAAAAGAAGGCTCGGGAGGAACGCCGCCGAGAGCGCAGGATTGAGATAGAGGAGAACAAGAAACAGGGCAAGTACCCAGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000325954.9
ENST00000366112.6
ENST00000413266.6
ENST00000535470.5
ENST00000540046.5
ENST00000545419.5
ENST00000546262.6
CDS GCA 90 bp TACTCCCGCACGAGGCAGCGCACATTCACAGGGTGCAGGAACATATaGTGTCCATCTTCCGCTGAGGACAAGGGGCTCTATCACACACCA +
Preference number: 5 (lower is better)
Translates to: YSRTRQRTFTGCRNI*CPSSAEDKGLYHTP
Trigger: TGGTGTGTGATAGAGCCCCTTGTCCTCAGCGGAAGATGGACAGCATATGTTCCTGCACCCTGTGAATGTGCGCTGCCTCGTGCGGGAGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535395.1
CDS GCA 90 bp TGCTCTAGTGCTACTTTCTCCTCCAGAACTACCCGGTGCAGCACCTaGTCCTTAGAGGCCAGCAGCAACTTGGAGTACTGGCTGTGCTGT +
Preference number: 5 (lower is better)
Translates to: CSSATFSSRTTRCST*SLEASSNLEYWLCC
Trigger: ACAGCACAGCCAGTACTCCAAGTTGCTGCTGGCCTCTAAGGAGCAGGTGCTGCACCGGGTAGTTCTGGAGGAGAAAGTAGCACTAGAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325954.9
ENST00000413266.6
ENST00000537740.1
ENST00000542207.5
ENST00000543675.5
CDS GCA 90 bp TCAATAAAGCAGGACTCGGGAGTGTGCTTCTCCTCTGCCAGCTGCTaGTCTAGTGCTACTTTCTCCTCCAGAACTACCCGGTGCAGCACC +
Preference number: 5 (lower is better)
Translates to: SIKQDSGVCFSSASC*SSATFSSRTTRCST
Trigger: GGTGCTGCACCGGGTAGTTCTGGAGGAGAAAGTAGCACTAGAGCAGCAGCTGGCAGAGGAGAAGCACACTCCCGAGTCCTGCTTTATTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325954.9
ENST00000413266.6
ENST00000537740.1
ENST00000542207.5
ENST00000543675.5
CDS CCA 90 bp CTTCCAGACTCCCAACGCAGAATGAGGGACTGCCCTGACTGGCAGTaGGTGACAGAGGGGTCAGCAGAAAGTACTTGCCCTGTTTCTTGT +
Preference number: 5 (lower is better)
Translates to: LPDSQRRMRDCPDWQ*VTEGSAESTCPVSC
Trigger: ACAAGAAACAGGGCAAGTACTTTCTGCTGACCCCTCTGTCACCCACTGCCAGTCAGGGCAGTCCCTCATTCTGCGTTGGGAGTCTGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538254.1
CDS-3UTR CAA 90 bp ACGGGTTATCTTGGCTGCAGTAGGTGGATAGAGGCATATTGGGCAAGATGGCACTTGGAGCCGCTGTTCTaGTCCATGTCGGAGGCGGTG +
Preference number: 5 (lower is better)
Translates to: TGYLGCSRWIEAYWARWHLEPLF*SMSEAV
Trigger: CACCGCCTCCGACATGGACAAGAACAGCGGCTCCAA...GTGCCATCTTGCCCAATATGCCTCTATCCACCTACTGCAGCCAAGATAACCCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538796.5
CDS-3UTR CAA 90 bp GGCCCTGCTCTCCTGCAGCTGTACCAGACTCCTCCTCCTATGACTCAAGCCAGTAGAGACCACAGGAGGTaGCAAAGCCAGTTCACAGAT +
Preference number: 5 (lower is better)
Translates to: GPALLQLYQTPPPMTQASRDHRR*QSQFTD
Trigger: ATCTGTGAACTGGCTTTGCAACCTCCTGTGGTCTCT...ACTGGCTTGAGTCATAGGAGGAGGAGTCTGGTACAGCTGCAGGAGAGCAGGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325954.9
CDS TCA 90 bp ATCCTGCGCTCTCGGCGGCGTTCCTCCCGAGCCTTCTTTTGGCGCTaGCGTTTCCTCTTCTCAATGTCATCTGAGAACATCTCTAGGGTT +
Preference number: 5 (lower is better)
Translates to: ILRSRRRSSRAFFWR*RFLFSMSSENISRV
Trigger: AACCCTAGAGATGTTCTCAGATGACATTGAGAAGAGGAAACGTCAGCGCCAAAAGAAGGCTCGGGAGGAACGCCGCCGAGAGCGCAGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000325954.9
ENST00000366112.6
ENST00000413266.6
ENST00000535395.1
ENST00000540046.5
ENST00000545419.5
ENST00000546262.6
CDS GCA 90 bp TTGAGCTCCTGGATAGCTGCCTCAATAAAGCAGGACTCGGGAGTGTaGTTCTCCTCTGCCAGCTGCTGCTCTAGTGCTACTTTCTCCTCC +
Preference number: 5 (lower is better)
Translates to: LSSWIAASIKQDSGV*FSSASCCSSATFSS
Trigger: GGAGGAGAAAGTAGCACTAGAGCAGCAGCTGGCAGAGGAGAAGCACACTCCCGAGTCCTGCTTTATTGAGGCAGCTATCCAGGAGCTCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000325954.9
ENST00000413266.6
ENST00000537740.1
ENST00000542207.5
ENST00000542438.1
ENST00000543675.5
CDS GCA 90 bp GGAGAGCTGCTGAGGCGTGTGAAGCCTGACTTGGTGATGGGTTCCTaGTGGCTGGACTCAGTGCAAATGGTCCCCTCTTTAAGATTGTCA +
Preference number: 5 (lower is better)
Translates to: GELLRRVKPDLVMGS*WLDSVQMVPSLRLS
Trigger: TGACAATCTTAAAGAGGGGACCATTTGCACTGAGTCCAGCCAGCAGGAACCCATCACCAAGTCAGGCTTCACACGCCTCAGCAGCTCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000325954.9
ENST00000413266.6
ENST00000540046.5
ENST00000544124.1
ENST00000545419.5
ENST00000546262.6
CDS-3UTR CAA 90 bp GAAGAGGCAAAACCCTCCTTTCACACATGCAAGTGCCAAGGACAGCCTACTCCACGTGTGAAGCCTGACTaGGTGATGGGTTCCTGCTGG +
Preference number: 5 (lower is better)
Translates to: EEAKPSFHTCKCQGQPTPRVKPD*VMGSCW
Trigger: CCAGCAGGAACCCATCACCAAGTCAGGCTTCACACG...TGGAGTAGGCTGTCCTTGGCACTTGCATGTGTGAAAGGAGGGTTTTGCCTCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325954.9
CDS CCA 90 bp GAGCTGCTGAGGCGTGTGAAGCCTGACTTGGTGATGGGTTCCTGCTaGCTGGACTCAGTGCAAATGGTCCCCTCTTTAAGATTGTCATCT +
Preference number: 5 (lower is better)
Translates to: ELLRRVKPDLVMGSC*LDSVQMVPSLRLSS
Trigger: AGATGACAATCTTAAAGAGGGGACCATTTGCACTGAGTCCAGCCAGCAGGAACCCATCACCAAGTCAGGCTTCACACGCCTCAGCAGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000325954.9
ENST00000413266.6
ENST00000540046.5
ENST00000544124.1
ENST00000545419.5
ENST00000546262.6
CDS-3UTR CAA 90 bp CCCTGCTCTCCTGCAGCTGTACCAGACTCCTCCTCCTATGACTCAAGCCAGTCATCCCTGTTTCCTTCCTaGGCTTCTCAAACTAGGAAG +
Preference number: 5 (lower is better)
Translates to: PCSPAAVPDSSSYDSSQSSLFPS*ASQTRK
Trigger: CTTCCTAGTTTGAGAAGCCAAGGAAGGAAACAGGGA...TGACTGGCTTGAGTCATAGGAGGAGGAGTCTGGTACAGCTGCAGGAGAGCAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325954.9
CDS-3UTR CAA 90 bp TCAAGAAGAGGCAAAACCCTCCTTTCACACATGCAAGTGCCAAGGACAGCCTACGCTGCCGCCGCCCCTTaGAGGAGGCATCTTGTTAAA +
Preference number: 5 (lower is better)
Translates to: SRRGKTLLSHMQVPRTAYAAAAP*RRHLVK
Trigger: TTTAACAAGATGCCTCCTCAAAGGGGCGGCGGCAGC...GTAGGCTGTCCTTGGCACTTGCATGTGTGAAAGGAGGGTTTTGCCTCTTCTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325954.9
CDS-3UTR CAA 90 bp TCTCACTCAGTGAAAGATAGTGCAGGATGCATGCCCAGCAGAAGATGTGTCCACGAAGAGCTAAAGAGTTaGCTGCTGCCGCCGCCCCTT +
Preference number: 5 (lower is better)
Translates to: SHSVKDSAGCMPSRRCVHEELKS*LLPPPL
Trigger: AAGGGGCGGCGGCAGCAGCAAACTCTTTAGCTCTTC...GTGGACACATCTTCTGCTGGGCATGCATCCTGCACTATCTTTCACTGAGTGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536869.5
ENST00000538796.5
CDS-3UTR CAA 90 bp CCTGACATGATGCTACAGCAGAGCAGTGTGTGCCATTCTGGGTTGGACTGCTCTGGCTTATGTCCCCACTaGTTCCTCTTTCCCCAGCTA +
Preference number: 5 (lower is better)
Translates to: PDMMLQQSSVCHSGLDCSGLCPH*FLFPQL
Trigger: TAGCTGGGGAAAGAGGAACAAGTGGGGACATAAGCC...AGAGCAGTCCAACCCAGAATGGCACACACTGCTCTGCTGTAGCATCATGTCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325954.9
CDS-3UTR CAA 90 bp GCAGTGTGTGCCATTCTGGGTTGGACTGCTCTAATGCATCTCAAAGGGGACTCAAGCCATCAGCACCAGTaGTTCCAGAGCAGCCACAAC +
Preference number: 5 (lower is better)
Translates to: AVCAILGWTALMHLKGDSSHQHQ*FQSSHN
Trigger: GTTGTGGCTGCTCTGGAACAACTGGTGCTGATGGCT...TGAGTCCCCTTTGAGATGCATTAGAGCAGTCCAACCCAGAATGGCACACACTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325954.9
CDS-3UTR CAA 90 bp GACTCAAGCCAGTCACTGAAAACAAGCTCGATCTTAGGGGTAGCAGGTCTCAGGCTCCCGAGCCTTCTTTaGGCGCTGACGTTTCCTCTT +
Preference number: 5 (lower is better)
Translates to: DSSQSLKTSSILGVAGLRLPSLL*ALTFPL
Trigger: AAGAGGAAACGTCAGCGCCAAAAGAAGGCTCGGGAG...CCTGAGACCTGCTACCCCTAAGATCGAGCTTGTTTTCAGTGACTGGCTTGAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325954.9
CDS-3UTR CAA 90 bp CAAGAAGAGGCAAAACCCTCCTTTCACACATGCAAGTGCCAAGGACAGCCTACTGCTAAACTCTGCCCGTaGAGCCTCTGCTACCTCATC +
Preference number: 5 (lower is better)
Translates to: QEEAKPSFHTCKCQGQPTAKLCP*SLCYLI
Trigger: GATGAGGTAGCAGAGGCTCAACGGGCAGAGTTTAGC...AGTAGGCTGTCCTTGGCACTTGCATGTGTGAAAGGAGGGTTTTGCCTCTTCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325954.9
CDS-3UTR CAA 90 bp TCTCACTCAGTGAAAGATAGTGCAGGATGCATGCCCAGCAGAAGATGTGTCCACGCTAAACTCTGCCCGTaGAGCCTCTGCTACCTCATC +
Preference number: 5 (lower is better)
Translates to: SHSVKDSAGCMPSRRCVHAKLCP*SLCYLI
Trigger: GATGAGGTAGCAGAGGCTCAACGGGCAGAGTTTAGC...GTGGACACATCTTCTGCTGGGCATGCATCCTGCACTATCTTTCACTGAGTGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538796.5
CDS TCA 90 bp TTGGTAAAAGTAGTAACAAGGAGAGCTGCTGAGGCGTGTGAAGCCTaGCTTGGTGATGGGTTCCTGCTGGCTGGACTCAGTGCAAATGGT +
Preference number: 5 (lower is better)
Translates to: LVKVVTRRAAEACEA*LGDGFLLAGLSANG
Trigger: ACCATTTGCACTGAGTCCAGCCAGCAGGAACCCATCACCAAGTCAGGCTTCACACGCCTCAGCAGCTCTCCTTGTTACTACTTTTACCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000325954.9
ENST00000413266.6
ENST00000540046.5
ENST00000544124.1
ENST00000545419.5
ENST00000546262.6
CDS-3UTR CAA 90 bp AACTTTCATTTTTGGGGTAGGAAAGTTCACGTTTGCGATTATAACGCTTGGATCGGCGGCTGTTGCCCTTaGCTGCTGCCCGAAGAGGCG +
Preference number: 5 (lower is better)
Translates to: NFHFWGRKVHVCDYNAWIGGCCP*LLPEEA
Trigger: CGCCTCTTCGGGCAGCAGCAAAGGGCAACAGCCGCC...GATCCAAGCGTTATAATCGCAAACGTGAACTTTCCTACCCCAAAAATGAAAGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000538796.5
CDS-3UTR CAA 90 bp TCAAGAAGAGGCAAAACCCTCCTTTCACACATGCAAGTGCCAAGGACAGCCTACTTCTTTCCATCGCTCTaGGGTTTAGACTCGCCGGCT +
Preference number: 5 (lower is better)
Translates to: SRRGKTLLSHMQVPRTAYFFPSL*GLDSPA
Trigger: AGCCGGCGAGTCTAAACCCAAGAGCGATGGAAAGAA...GTAGGCTGTCCTTGGCACTTGCATGTGTGAAAGGAGGGTTTTGCCTCTTCTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325954.9
CDS-3UTR CAA 90 bp TCTCACTCAGTGAAAGATAGTGCAGGATGCATGCCCAGCAGAAGATGTGTCCACTTCTTTCCATCGCTCTaGGGTTTAGACTCGCCGGCT +
Preference number: 5 (lower is better)
Translates to: SHSVKDSAGCMPSRRCVHFFPSL*GLDSPA
Trigger: AGCCGGCGAGTCTAAACCCAAGAGCGATGGAAAGAA...GTGGACACATCTTCTGCTGGGCATGCATCCTGCACTATCTTTCACTGAGTGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536869.5
CDS-3UTR CAA 90 bp CAGGATGCATGCCCAGCAGAAGATGTGTCCACAACGGGTTATCTTGGCTGCAGTGTGGATAGAGGCATATaGGGCAAGATGGCACTTCAT +
Preference number: 5 (lower is better)
Translates to: QDACPAEDVSTTGYLGCSVDRGI*GKMALH
Trigger: ATGAAGTGCCATCTTGCCCAATATGCCTCTATCCAC...ACTGCAGCCAAGATAACCCGTTGTGGACACATCTTCTGCTGGGCATGCATCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536869.5
ENST00000538796.5
CDS-3UTR CAA 90 bp CCAGGAAGCCCTGACATGATGCTACAGCAGAGCAGTGTGTGCCATTCTGGGTTGTCTACATTCATCCATTaGGATTTGGGCAAAGCCACC +
Preference number: 5 (lower is better)
Translates to: PGSPDMMLQQSSVCHSGLSTFIH*DLGKAT
Trigger: GGTGGCTTTGCCCAAATCCAAATGGATGAATGTAGA...CAACCCAGAATGGCACACACTGCTCTGCTGTAGCATCATGTCAGGGCTTCCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325954.9
CDS CCA 90 bp AGGAGGTTGCAAAGCCAGTTCACAGATGCTGAACTCACAGGTGAGTaGCAAGTGAGAGAGATATCTGTGACGCTGTCGAACATCCTCAGA +
Preference number: 5 (lower is better)
Translates to: RRLQSQFTDAELTGE*QVREISVTLSNILR
Trigger: TCTGAGGATGTTCGACAGCGTCACAGATATCTCTCTCACTTGCCACTCACCTGTGAGTTCAGCATCTGTGAACTGGCTTTGCAACCTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000325954.9
ENST00000413266.6
ENST00000535395.1
ENST00000540046.5
ENST00000545419.5
ENST00000546262.6
CDS CCA 90 bp TCCACAACGGGTTATCTTGGCTGCAGTAGGTGGATAGAGGCATATTaGGCAAGATGGCACTTCATGGCACTTGTTCCACAAAGTCCCAGT +
Preference number: 5 (lower is better)
Translates to: STTGYLGCSRWIEAY*ARWHFMALVPQSPS
Trigger: ACTGGGACTTTGTGGAACAAGTGCCATGAAGTGCCATCTTGCCCAATATGCCTCTATCCACCTACTGCAGCCAAGATAACCCGTTGTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543578.1
CDS CCA 90 bp CCAGCAGAAGATGTGTCCACAACGGGTTATCTTGGCTGCAGTAGGTaGATAGAGGCATATTGGGCAAGATGGCACTTCATGGCACTTGTT +
Preference number: 5 (lower is better)
Translates to: PAEDVSTTGYLGCSR*IEAYWARWHFMALV
Trigger: AACAAGTGCCATGAAGTGCCATCTTGCCCAATATGCCTCTATCCACCTACTGCAGCCAAGATAACCCGTTGTGGACACATCTTCTGCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543578.1
CDS-3UTR CAA 90 bp GGCCCTGCTCTCCTGCAGCTGTACCAGACTCCTCCTCCTATGACTCAAGCCAGTTGTAAAAAGAGTTCCTaGTTAAAAGGCTTATGTCCC +
Preference number: 5 (lower is better)
Translates to: GPALLQLYQTPPPMTQASCKKSS*LKGLCP
Trigger: GGGACATAAGCCTTTTAACAAGGAACTCTTTTTACA...ACTGGCTTGAGTCATAGGAGGAGGAGTCTGGTACAGCTGCAGGAGAGCAGGGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325954.9
CDS-3UTR CAA 90 bp CCTGACATGATGCTACAGCAGAGCAGTGTGTGCCATTCTGGGTTGGACTGCTCTATGAGCTGTGTAGTCTaGGTCTTCAGACACCACAAA +
Preference number: 5 (lower is better)
Translates to: PDMMLQQSSVCHSGLDCSMSCVV*VFRHHK
Trigger: TTTGTGGTGTCTGAAGACCAAGACTACACAGCTCAT...AGAGCAGTCCAACCCAGAATGGCACACACTGCTCTGCTGTAGCATCATGTCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325954.9
CDS-3UTR CAA 90 bp CAGGATGCATGCCCAGCAGAAGATGTGTCCACAACGGGTTATCTTGGCTGCAGTATGAGCTGTGTAGTCTaGGTCTTCAGACACCACAAA +
Preference number: 5 (lower is better)
Translates to: QDACPAEDVSTTGYLGCSMSCVV*VFRHHK
Trigger: TTTGTGGTGTCTGAAGACCAAGACTACACAGCTCAT...ACTGCAGCCAAGATAACCCGTTGTGGACACATCTTCTGCTGGGCATGCATCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536869.5
ENST00000538796.5
CDS-3UTR CAA 90 bp GACTCAAGCCAGTCACTGAAAACAAGCTCGATCTTAGGGGTAGCAGGTCTCAGGGCTACAAATGCGCACTaGTTCCACAAAGTCCCAGTT +
Preference number: 5 (lower is better)
Translates to: DSSQSLKTSSILGVAGLRATNAH*FHKVPV
Trigger: AACTGGGACTTTGTGGAACAAGTGCGCATTTGTAGC...CCTGAGACCTGCTACCCCTAAGATCGAGCTTGTTTTCAGTGACTGGCTTGAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325954.9
CDS-3UTR CAA 90 bp GACTCAAGCCAGTCACTGAAAACAAGCTCGATCTTAGGGGTAGCAGGTCTCAGGGTGGATAGAGGCATATaGGGCAAGATGGCACTTCAT +
Preference number: 5 (lower is better)
Translates to: DSSQSLKTSSILGVAGLRVDRGI*GKMALH
Trigger: ATGAAGTGCCATCTTGCCCAATATGCCTCTATCCAC...CCTGAGACCTGCTACCCCTAAGATCGAGCTTGTTTTCAGTGACTGGCTTGAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325954.9
CDS-3UTR CAA 90 bp ACGGGTTATCTTGGCTGCAGTAGGTGGATAGAGGCATATTGGGCAAGATGGCACGTGGATAGAGGCATATaGGGCAAGATGGCACTTCAT +
Preference number: 5 (lower is better)
Translates to: TGYLGCSRWIEAYWARWHVDRGI*GKMALH
Trigger: ATGAAGTGCCATCTTGCCCAATATGCCTCTATCCAC...GTGCCATCTTGCCCAATATGCCTCTATCCACCTACTGCAGCCAAGATAACCCGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536869.5
ENST00000538796.5
CDS-3UTR CAA 90 bp CTGAGTCCAGGAAGCCCTGACATGATGCTACAGCAGAGCAGTGTGTGCCATTCTGTGGCAACAACACTCTaGAGATCCTTCTTATGCACA +
Preference number: 5 (lower is better)
Translates to: LSPGSPDMMLQQSSVCHSVATTL*RSFLCT
Trigger: TGTGCATAAGAAGGATCTCAAGAGTGTTGTTGCCAC...AGAATGGCACACACTGCTCTGCTGTAGCATCATGTCAGGGCTTCCTGGACTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325954.9
CDS-3UTR CAA 90 bp GCAGTGTGTGCCATTCTGGGTTGGACTGCTCTAATGCATCTCAAAGGGGACTCATTCATCCATTTGGATTaGGGCAAAGCCACCAACACC +
Preference number: 5 (lower is better)
Translates to: AVCAILGWTALMHLKGDSFIHLD*GKATNT
Trigger: GGTGTTGGTGGCTTTGCCCAAATCCAAATGGATGAA...TGAGTCCCCTTTGAGATGCATTAGAGCAGTCCAACCCAGAATGGCACACACTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325954.9
CDS-3UTR CAA 90 bp CATCAAATTCAGCTCAAACCAAGGCATAAGAAAACTGCTCTAGATGAGAGGGAGGCCTCTTCCCGAGTCTaGAGCTCCTGGATAGCTGCC +
Preference number: 5 (lower is better)
Translates to: HQIQLKPRHKKTALDEREASSRV*SSWIAA
Trigger: GGCAGCTATCCAGGAGCTCAAGACTCGGGAAGAGGC...CTCCCTCTCATCTAGAGCAGTTTTCTTATGCCTTGGTTTGAGCTGAATTTGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325954.9
CDS-3UTR CAA 90 bp CAGGATGCATGCCCAGCAGAAGATGTGTCCACAACGGGTTATCTTGGCTGCAGTGAGCGACGGGACTGGTaGTTAAAACTTTCATTTTTG +
Preference number: 5 (lower is better)
Translates to: QDACPAEDVSTTGYLGCSERRDW*LKLSFL
Trigger: CAAAAATGAAAGTTTTAACAACCAGTCCCGTCGCTC...ACTGCAGCCAAGATAACCCGTTGTGGACACATCTTCTGCTGGGCATGCATCCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000536869.5
ENST00000538796.5
CDS-3UTR CAA 90 bp CAGAACTGTAACAGATGGGACATTTACTCCACGTCTTCTCACTCAGTGAAAGATGCTGCCGCCGCCCCTTaGAGGAGGCATCTTGTTAAA +
Preference number: 5 (lower is better)
Translates to: QNCNRWDIYSTSSHSVKDAAAAP*RRHLVK
Trigger: TTTAACAAGATGCCTCCTCAAAGGGGCGGCGGCAGC...ATCTTTCACTGAGTGAGAAGACGTGGAGTAAATGTCCCATCTGTTACAGTTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536869.5
ENST00000538796.5
CDS-3UTR CAA 90 bp ATTTTTGGGGTAGGAAAGTTCACGTTTGCGATTATAACGCTTGGATCCACTGGAGCTGCCGCCGCCCCTTaGAGGAGGCATCTTGTTAAA +
Preference number: 5 (lower is better)
Translates to: IFGVGKFTFAIITLGSTGAAAAP*RRHLVK
Trigger: TTTAACAAGATGCCTCCTCAAAGGGGCGGCGGCAGC...TCCAGTGGATCCAAGCGTTATAATCGCAAACGTGAACTTTCCTACCCCAAAAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000538796.5
CDS-3UTR CAA 90 bp CAGAACTGTAACAGATGGGACATTTACTCCACGTCTTCTCACTCAGTGAAAGATGAAGAGCTAAAGAGTTaGCTGCTGCCGCCGCCCCTT +
Preference number: 5 (lower is better)
Translates to: QNCNRWDIYSTSSHSVKDEELKS*LLPPPL
Trigger: AAGGGGCGGCGGCAGCAGCAAACTCTTTAGCTCTTC...ATCTTTCACTGAGTGAGAAGACGTGGAGTAAATGTCCCATCTGTTACAGTTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536869.5
ENST00000538796.5
CDS-3UTR CAA 90 bp GCAGTGTGTGCCATTCTGGGTTGGACTGCTCTAATGCATCTCAAAGGGGACTCAACCACAAATTGGCAGTaGGCCTGTAAAAAGAGTTCC +
Preference number: 5 (lower is better)
Translates to: AVCAILGWTALMHLKGDSTTNWQ*ACKKSS
Trigger: GGAACTCTTTTTACAGGCCAACTGCCAATTTGTGGT...TGAGTCCCCTTTGAGATGCATTAGAGCAGTCCAACCCAGAATGGCACACACTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325954.9
CDS-3UTR CAA 90 bp GCAGTGTGTGCCATTCTGGGTTGGACTGCTCTAATGCATCTCAAAGGGGACTCAGTCCCCTCTTTAAGATaGTCATCTGCTAACTCCAAG +
Preference number: 5 (lower is better)
Translates to: AVCAILGWTALMHLKGDSVPSLR*SSANSK
Trigger: CTTGGAGTTAGCAGATGACAATCTTAAAGAGGGGAC...TGAGTCCCCTTTGAGATGCATTAGAGCAGTCCAACCCAGAATGGCACACACTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325954.9
CDS-3UTR CAA 90 bp TTGAGCCTCTGCTACCTCATCTCGTCTTCCACCATTAAAAGAAGAGCTAAAGAGGGCTTATGTCCCCACTaGTTCCTCTTTCCCCAGCTA +
Preference number: 5 (lower is better)
Translates to: LSLCYLISSSTIKRRAKEGLCPH*FLFPQL
Trigger: TAGCTGGGGAAAGAGGAACAAGTGGGGACATAAGCC...CTCTTTAGCTCTTCTTTTAATGGTGGAAGACGAGATGAGGTAGCAGAGGCTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000538796.5
CDS-3UTR CAA 90 bp GTGAAAGATAGTGCAGGATGCATGCCCAGCAGAAGATGTGTCCACAACGGGTTAACCACAAATTGGCAGTaGGCCTGTAAAAAGAGTTCC +
Preference number: 5 (lower is better)
Translates to: VKDSAGCMPSRRCVHNGLTTNWQ*ACKKSS
Trigger: GGAACTCTTTTTACAGGCCAACTGCCAATTTGTGGT...TAACCCGTTGTGGACACATCTTCTGCTGGGCATGCATCCTGCACTATCTTTCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000538796.5
CDS-3UTR CAA 90 bp TGGGCAAGATGGCACTTCATGGCTACAAATGCGCACTTGTTCCACAAAGTCCCAGTGGCAACAACACTCTaGAGATCCTTCTTATGCACA +
Preference number: 5 (lower is better)
Translates to: WARWHFMATNAHLFHKVPVATTL*RSFLCT
Trigger: TGTGCATAAGAAGGATCTCAAGAGTGTTGTTGCCAC...TGGGACTTTGTGGAACAAGTGCGCATTTGTAGCCATGAAGTGCCATCTTGCCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536869.5
ENST00000538796.5
CDS-3UTR CAA 90 bp GCAGTGTGTGCCATTCTGGGTTGGACTGCTCTAATGCATCTCAAAGGGGACTCATACTTGCCCTGTTTCTaGTTCTCCTCTATCTCAATC +
Preference number: 5 (lower is better)
Translates to: AVCAILGWTALMHLKGDSYLPCF*FSSISI
Trigger: GATTGAGATAGAGGAGAACAAGAAACAGGGCAAGTA...TGAGTCCCCTTTGAGATGCATTAGAGCAGTCCAACCCAGAATGGCACACACTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325954.9
CDS CCA 90 bp CATCTGCCAAAGTGGGAAAGAAGTGGGGGAGAGAATTTAAGTAGCTaGTCCAACTTCTTTTTCAGACCTACCTTGACTAACTGGAGAGGC +
Preference number: 5 (lower is better)
Translates to: HLPKWERSGGENLSS*SNFFFRPTLTNWRG
Trigger: GCCTCTCCAGTTAGTCAAGGTAGGTCTGAAAAAGAAGTTGGACCAGCTACTTAAATTCTCTCCCCCACTTCTTTCCCACTTTGGCAGATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000542701.1
CDS-3UTR CAA 90 bp GAGCTGTGTAGTCTTGGTCTTCAGACACCACAAATTGGCAGTTGGCCTGTAAAATCCCTGTTTCCTTCCTaGGCTTCTCAAACTAGGAAG +
Preference number: 5 (lower is better)
Translates to: ELCSLGLQTPQIGSWPVKSLFPS*ASQTRK
Trigger: CTTCCTAGTTTGAGAAGCCAAGGAAGGAAACAGGGA...TTTTACAGGCCAACTGCCAATTTGTGGTGTCTGAAGACCAAGACTACACAGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538796.5
CDS-3UTR CAA 90 bp TCAAGAAGAGGCAAAACCCTCCTTTCACACATGCAAGTGCCAAGGACAGCCTACGAGCGACGGGACTGGTaGTTAAAACTTTCATTTTTG +
Preference number: 5 (lower is better)
Translates to: SRRGKTLLSHMQVPRTAYERRDW*LKLSFL
Trigger: CAAAAATGAAAGTTTTAACAACCAGTCCCGTCGCTC...GTAGGCTGTCCTTGGCACTTGCATGTGTGAAAGGAGGGTTTTGCCTCTTCTTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000325954.9
CDS-3UTR CAA 90 bp TCTCACTCAGTGAAAGATAGTGCAGGATGCATGCCCAGCAGAAGATGTGTCCACGAGCGACGGGACTGGTaGTTAAAACTTTCATTTTTG +
Preference number: 5 (lower is better)
Translates to: SHSVKDSAGCMPSRRCVHERRDW*LKLSFL
Trigger: CAAAAATGAAAGTTTTAACAACCAGTCCCGTCGCTC...GTGGACACATCTTCTGCTGGGCATGCATCCTGCACTATCTTTCACTGAGTGAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000536869.5
ENST00000538796.5
CDS-3UTR CAA 90 bp ATTCAGCTCAAACCAAGGCATAAGAAAACTGCTCTAGATGAGAGGGAGATGGTGTGGACTTCTGGGTACTaGCCCTGTTTCTTGTTCTCC +
Preference number: 5 (lower is better)
Translates to: IQLKPRHKKTALDEREMVWTSGY*PCFLFS
Trigger: GGAGAACAAGAAACAGGGCAAGTACCCAGAAGTCCA...CACCATCTCCCTCTCATCTAGAGCAGTTTTCTTATGCCTTGGTTTGAGCTGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325954.9
CDS-3UTR CAA 90 bp AAGAAGAGGCAAAACCCTCCTTTCACACATGCAAGTGCCAAGGACAGCCTACTCTGTGCAGGTGATTTATaGCAACTATTTGCCTTCGCA +
Preference number: 5 (lower is better)
Translates to: KKRQNPPFTHASAKDSLLCAGDL*QLFAFA
Trigger: TGCGAAGGCAAATAGTTGCAATAAATCACCTGCACA...GAGTAGGCTGTCCTTGGCACTTGCATGTGTGAAAGGAGGGTTTTGCCTCTTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325954.9
CDS-3UTR CAA 90 bp GGGCAAGATGGCACTTCATGGCTACAAATGCGCACTTGTTCCACAAAGTCCCAGATCTTGTTAAAAGTCTaGCTTTTCTGTGAACTGGAG +
Preference number: 5 (lower is better)
Translates to: GQDGTSWLQMRTCSTKSQILLKV*LFCELE
Trigger: CTCCAGTTCACAGAAAAGCAAGACTTTTAACAAGAT...CTGGGACTTTGTGGAACAAGTGCGCATTTGTAGCCATGAAGTGCCATCTTGCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536869.5
ENST00000538796.5
CDS-3UTR CAA 90 bp TTCAGGTTGATCTTCTTAGGACCAGAGAACTGGGCAGGGCTAAACTCTGCCCGTTGTAAAAAGAGTTCCTaGTTAAAAGGCTTATGTCCC +
Preference number: 5 (lower is better)
Translates to: FRLIFLGPENWAGLNSARCKKSS*LKGLCP
Trigger: GGGACATAAGCCTTTTAACAAGGAACTCTTTTTACA...ACGGGCAGAGTTTAGCCCTGCCCAGTTCTCTGGTCCTAAGAAGATCAACCTGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000538796.5
CDS-3UTR CAA 90 bp GAGCTGTGTAGTCTTGGTCTTCAGACACCACAAATTGGCAGTTGGCCTGTAAAAATGAGCTGTGTAGTCTaGGTCTTCAGACACCACAAA +
Preference number: 5 (lower is better)
Translates to: ELCSLGLQTPQIGSWPVKMSCVV*VFRHHK
Trigger: TTTGTGGTGTCTGAAGACCAAGACTACACAGCTCAT...TTTTACAGGCCAACTGCCAATTTGTGGTGTCTGAAGACCAAGACTACACAGCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000538796.5
CDS-3UTR CAA 90 bp AGGATCAGCAAAATGAGCTGTGTAGTCTTGGTCTTCAGACACCACAAATTGGCAGCTACAAATGCGCACTaGTTCCACAAAGTCCCAGTT +
Preference number: 5 (lower is better)
Translates to: RISKMSCVVLVFRHHKLAATNAH*FHKVPV
Trigger: AACTGGGACTTTGTGGAACAAGTGCGCATTTGTAGC...TGCCAATTTGTGGTGTCTGAAGACCAAGACTACACAGCTCATTTTGCTGATCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538796.5
CDS-3UTR CAA 90 bp GAAGAGGCAAAACCCTCCTTTCACACATGCAAGTGCCAAGGACAGCCTACTCCAGCAGGAAGAGATCTCTaGTGTCAATACTTTATTTTG +
Preference number: 5 (lower is better)
Translates to: EEAKPSFHTCKCQGQPTPAGRDL*CQYFIL
Trigger: CAAAATAAAGTATTGACACAAGAGATCTCTTCCTGC...TGGAGTAGGCTGTCCTTGGCACTTGCATGTGTGAAAGGAGGGTTTTGCCTCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325954.9
CDS-3UTR CAA 90 bp CAAGAAGAGGCAAAACCCTCCTTTCACACATGCAAGTGCCAAGGACAGCCTACTAATGAACTAAAAACCTaGGCAGGAAGAGATCTCTTG +
Preference number: 5 (lower is better)
Translates to: QEEAKPSFHTCKCQGQPTNELKT*AGRDLL
Trigger: CAAGAGATCTCTTCCTGCCAAGGTTTTTAGTTCATT...AGTAGGCTGTCCTTGGCACTTGCATGTGTGAAAGGAGGGTTTTGCCTCTTCTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325954.9
CDS-3UTR CAA 90 bp AAGAGGCAAAACCCTCCTTTCACACATGCAAGTGCCAAGGACAGCCTACTCCATATCTTGTTAAAAGTCTaGCTTTTCTGTGAACTGGAG +
Preference number: 5 (lower is better)
Translates to: KRQNPPFTHASAKDSLLHILLKV*LFCELE
Trigger: CTCCAGTTCACAGAAAAGCAAGACTTTTAACAAGAT...ATGGAGTAGGCTGTCCTTGGCACTTGCATGTGTGAAAGGAGGGTTTTGCCTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000325954.9
CDS-3UTR CAA 90 bp CAGAACTGTAACAGATGGGACATTTACTCCACGTCTTCTCACTCAGTGAAAGATATTAGTAATTCGCTCTaGGGTTTAGACTCGCCGGCT +
Preference number: 5 (lower is better)
Translates to: QNCNRWDIYSTSSHSVKDISNSL*GLDSPA
Trigger: AGCCGGCGAGTCTAAACCCAAGAGCGAATTACTAAT...ATCTTTCACTGAGTGAGAAGACGTGGAGTAAATGTCCCATCTGTTACAGTTCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538796.5
CDS-3UTR CAA 90 bp CAGAACTGTAACAGATGGGACATTTACTCCACGTCTTCTCACTCAGTGAAAGATTTCAGACACCACAAATaGGCAGCTCATCTCGTCTTC +
Preference number: 5 (lower is better)
Translates to: QNCNRWDIYSTSSHSVKDFRHHK*AAHLVF
Trigger: GAAGACGAGATGAGCTGCCAATTTGTGGTGTCTGAA...ATCTTTCACTGAGTGAGAAGACGTGGAGTAAATGTCCCATCTGTTACAGTTCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536869.5
CDS-3UTR CAA 90 bp ATGCGCACTTGTTCCACAAAGTCCCAGTTAACTAATGTATCAGGATCAGCAAAAGCTACAAATGCGCACTaGTTCCACAAAGTCCCAGTT +
Preference number: 5 (lower is better)
Translates to: MRTCSTKSQLTNVSGSAKATNAH*FHKVPV
Trigger: AACTGGGACTTTGTGGAACAAGTGCGCATTTGTAGC...TTTTGCTGATCCTGATACATTAGTTAACTGGGACTTTGTGGAACAAGTGCGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536869.5
ENST00000538796.5
CDS-3UTR CAA 90 bp CAGGTGATTTATTGCAACTATTTGCCTTCGCATTCTAATGCACCTAGAGGTCACCTGTCCATCTTCCGCTaGGTAAAAGTAGTAACAAGG +
Preference number: 5 (lower is better)
Translates to: QVIYCNYLPSHSNAPRGHLSIFR*VKVVTR
Trigger: CCTTGTTACTACTTTTACCAAGCGGAAGATGGACAG...GTGACCTCTAGGTGCATTAGAATGCGAAGGCAAATAGTTGCAATAAATCACCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325954.9
CDS-3UTR CAA 90 bp TTCAAACTGGGTGTCCTAAATCCATTTTATTCCCACCCCTGTTTCTTTAACAAGGTGTGCCATTCTGGGTaGGACTGCTCTAATGCATCT +
Preference number: 5 (lower is better)
Translates to: FKLGVLNPFYSHPCFFNKVCHSG*DCSNAS
Trigger: AGATGCATTAGAGCAGTCCAACCCAGAATGGCACAC...CTTGTTAAAGAAACAGGGGTGGGAATAAAATGGATTTAGGACACCCAGTTTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325954.9
CDS CCA 90 bp TTTCATTTTTGGGGTAGGAAAGTTCACGTTTGCGATTATAACGCTTaGATCCACTGGAGTTCTTTCCATCCATCATCCAGAGTAGTTGAC +
Preference number: 5 (lower is better)
Translates to: FHFWGRKVHVCDYNA*IHWSSFHPSSRVVD
Trigger: GTCAACTACTCTGGATGATGGATGGAAAGAACTCCAGTGGATCCAAGCGTTATAATCGCAAACGTGAACTTTCCTACCCCAAAAATGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000537997.1
ENST00000538796.5
CDS TCA 90 bp GAGGGGCAACATATGGCCTTACTACAGAATCAACTGACAACAAATTaGATCCAGCTGAAATTAGTAATTTCAAGGTCTGGCAAACTGGGA +
Preference number: 5 (lower is better)
Translates to: EGQHMALLQNQLTTN*IQLKLVISRSGKLG
Trigger: TCCCAGTTTGCCAGACCTTGAAATTACTAATTTCAGCTGGATTCAATTTGTTGTCAGTTGATTCTGTAGTAAGGCCATATGTTGCCCCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537997.1
CDS TCA 90 bp GAAATGGGTAAAGAACACTGCACAGAAGGCACAAGAGATTCTTACTaGGACCCTCAAATTGGGAATTCCGACTTTCTGGTTAAGTTTTTC +
Preference number: 5 (lower is better)
Translates to: EMGKEHCTEGTRDSY*DPQIGNSDFLVKFF
Trigger: GAAAAACTTAACCAGAAAGTCGGAATTCCCAATTTGAGGGTCTCAGTAAGAATCTCTTGTGCCTTCTGTGCAGTGTTCTTTACCCATTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000542701.1
CDS-3UTR CAA 90 bp CTACAAATGCGCACTTGTTCCACAAAGTCCCAGTTAACTAATGTATCAGGATCAATCTTGTTAAAAGTCTaGCTTTTCTGTGAACTGGAG +
Preference number: 5 (lower is better)
Translates to: LQMRTCSTKSQLTNVSGSILLKV*LFCELE
Trigger: CTCCAGTTCACAGAAAAGCAAGACTTTTAACAAGAT...TGATCCTGATACATTAGTTAACTGGGACTTTGTGGAACAAGTGCGCATTTGTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536869.5
ENST00000538796.5
CDS CAA 90 bp TTTAGACTCGCCGGCTGGCCCCGCCGAGGCGGAGCGGGGCGGCTGTaGCCCTTTGCTGCTGCCCGAAGAGGCGGAGGAGCTGTTGGAGCC +
Preference number: 6 (lower is better)
Translates to: FRLAGWPRRGGAGRL*PFAAARRGGGAVGA
Trigger: GGCTCCAACAGCTCCTCCGCCTCTTCGGGCAGCAGCAAAGGGCAACAGCCGCCCCGCTCCGCCTCGGCGGGGCCAGCCGGCGAGTCTAAA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000325954.9
ENST00000413266.6
ENST00000538796.5
ENST00000542438.1
ENST00000551139.6
CDS GCA 72 bp CCGAGGCGGAGCGGGGCGGCTGTTGCCCTTTGCTGCTaGCCGAAGAGGCGGAGGAGCTGTTGGAGCCGCTGT +
Preference number: 6 (lower is better)
Translates to: PRRSGAAVALCC*PKRRRSCWSRC
Trigger: ACAGCGGCTCCAACAGCTCCTCCGCCTCTTCGGGCAGCAGCAAAGGGCAACAGCCGCCCCGCTCCGCCTCGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325954.9
ENST00000413266.6
ENST00000538796.5
ENST00000542438.1
ENST00000551139.6
CDS CAA 90 bp GGCGGCTGTTGCCCTTTGCTGCTGCCCGAAGAGGCGGAGGAGCTGTaGGAGCCGCTGTTCTTGTCCATGTCGGAGGCGGTGGCGGCGGCG +
Preference number: 6 (lower is better)
Translates to: GGCCPLLLPEEAEEL*EPLFLSMSEAVAAA
Trigger: CGCCGCCGCCACCGCCTCCGACATGGACAAGAACAGCGGCTCCAACAGCTCCTCCGCCTCTTCGGGCAGCAGCAAAGGGCAACAGCCGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325954.9
ENST00000413266.6
ENST00000538796.5
ENST00000542438.1
CDS CCA 72 bp GGACACGCTCTCCCGCCGCGAGGCAGGGGAGAGGGCTaGCTGTCTCGGTGTCGGGGACTAGTGTCTCCGACA +
Preference number: 6 (lower is better)
Translates to: GHALPPRGRGEG*LSRCRGLVSPT
Trigger: TGTCGGAGACACTAGTCCCCGACACCGAGACAGCCAGCCCTCTCCCCTGCCTCGCGGCGGGAGAGCGTGTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325954.9
CDS CCA 72 bp ACTAGTGTCTCCGACACAGCAACGGATACTCGCCCCTaGGCCGAGGCCGACCTGCTCCGGGAATGGCGACGA +
Preference number: 6 (lower is better)
Translates to: TSVSDTATDTRP*AEADLLREWRR
Trigger: TCGTCGCCATTCCCGGAGCAGGTCGGCCTCGGCCCAGGGGCGAGTATCCGTTGCTGTGTCGGAGACACTAGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325954.9
CDS CCA 72 bp GCCCTTTGCTGCTGCCCGAAGAGGCGGAGGAGCTGTTaGAGCCGCTGTTCTTGTCCATGTCGGAGGCGGTGG +
Preference number: 6 (lower is better)
Translates to: ALCCCPKRRRSC*SRCSCPCRRRW
Trigger: CCACCGCCTCCGACATGGACAAGAACAGCGGCTCCAACAGCTCCTCCGCCTCTTCGGGCAGCAGCAAAGGGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325954.9
ENST00000413266.6
ENST00000538796.5
ENST00000542438.1
CDS GCA 72 bp CAGTTGCTGAGATCTTCTCGGGGCTCCTCTCCAGGCTaGCGTACTCCCGCACGAGGCAGCGCACATTCACAG +
Preference number: 6 (lower is better)
Translates to: QLLRSSRGSSPG*RTPARGSAHSQ
Trigger: CTGTGAATGTGCGCTGCCTCGTGCGGGAGTACGGCAGCCTGGAGAGGAGCCCCGAGAAGATCTCAGCAACTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000325954.9
ENST00000413266.6
ENST00000535395.1
ENST00000540046.5
ENST00000545419.5
ENST00000546262.6
CDS CCA 72 bp GCGGGGGTCGGCGGCGGCAGCGGTTCTCGGCCTTCATaGCGACATTTTTCCCTGTTTCCTTCCTTGGCTTCT +
Preference number: 6 (lower is better)
Translates to: AGVGGGSGSRPS*RHFSLFPSLAS
Trigger: AGAAGCCAAGGAAGGAAACAGGGAAAAATGTCGCCATGAAGGCCGAGAACCGCTGCCGCCGCCGACCCCCGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000325954.9
ENST00000538796.5
ENST00000539486.1
ENST00000542438.1
CDS TCA 72 bp AACCCTCAGCATCTGCATGGGAACCTGGACTTCTGCTaGGAGGAGAAATGGAGAGGGCCCCATGGCCCTCGG +
Preference number: 6 (lower is better)
Translates to: NPQHLHGNLDFC*EEKWRGPHGPR
Trigger: CCGAGGGCCATGGGGCCCTCTCCATTTCTCCTCTCAGCAGAAGTCCAGGTTCCCATGCAGATGCTGAGGGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535470.5
CDS GCA 72 bp CCGTACTCCCGCACGAGGCAGCGCACATTCACAGGGTaGAGGAACATATGCTGTCCATCTTCCGCTGAGGAC +
Preference number: 6 (lower is better)
Translates to: PYSRTRQRTFTG*RNICCPSSAED
Trigger: GTCCTCAGCGGAAGATGGACAGCATATGTTCCTGCACCCTGTGAATGTGCGCTGCCTCGTGCGGGAGTACGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535395.1
CDS CCA 72 bp GAGGAGAAATGGAGAGGGCCCCATGGCCCTCGGTGCTaGTGGGACCCAAAGCAGAATCAGAGGAGCAGGTAT +
Preference number: 6 (lower is better)
Translates to: EEKWRGPHGPRC*WDPKQNQRSRY
Trigger: ATACCTGCTCCTCTGATTCTGCTTTGGGTCCCACCAGCACCGAGGGCCATGGGGCCCTCTCCATTTCTCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325954.9
ENST00000366112.6
ENST00000413266.6
ENST00000535470.5
ENST00000545419.5
CDS CCA 72 bp TCCCAACGCAGAATGAGGGACTGCCCTGACTGGCAGTaGGTGACAGAGGGGTCAGCAGAAAGTACTTGCCCT +
Preference number: 6 (lower is better)
Translates to: SQRRMRDCPDWQ*VTEGSAESTCP
Trigger: AGGGCAAGTACTTTCTGCTGACCCCTCTGTCACCCACTGCCAGTCAGGGCAGTCCCTCATTCTGCGTTGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538254.1
CDS CAA 72 bp CGGCCTTCATGGCGACATTTTTCCCTGTTTCCTTCCTaGGCTTCTCAAACCCTGGGCCGAGGCCGACCTGCT +
Preference number: 6 (lower is better)
Translates to: RPSWRHFSLFPS*ASQTLGRGRPA
Trigger: AGCAGGTCGGCCTCGGCCCAGGGTTTGAGAAGCCAAGGAAGGAAACAGGGAAAAATGTCGCCATGAAGGCCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000542438.1
CDS TCA 72 bp AGACATGGAGTAGCCAGCAATCTCCACCACAGTTGCTaGGATCTTCTCGGGGCTCCTCTCCAGGCTGCCGTA +
Preference number: 6 (lower is better)
Translates to: RHGVASNLHHSC*DLLGAPLQAAV
Trigger: TACGGCAGCCTGGAGAGGAGCCCCGAGAAGATCTCAGCAACTGTGGTGGAGATTGCTGGCTACTCCATGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000325954.9
ENST00000413266.6
ENST00000535395.1
ENST00000540046.5
ENST00000545419.5
ENST00000546262.6
CDS GCA 72 bp GCTACTTTCTCCTCCAGAACTACCCGGTGCAGCACCTaGTCCTTAGAGGCCAGCAGCAACTTGGAGTACTGG +
Preference number: 6 (lower is better)
Translates to: ATFSSRTTRCST*SLEASSNLEYW
Trigger: CCAGTACTCCAAGTTGCTGCTGGCCTCTAAGGAGCAGGTGCTGCACCGGGTAGTTCTGGAGGAGAAAGTAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325954.9
ENST00000413266.6
ENST00000537740.1
ENST00000542207.5
ENST00000543675.5
CDS CAA 72 bp AACAGACTCCTTCGCCAAGGGAGCCATCAGCACCAGTaGTTCCAGAGCAGCCACAACACCAGTGACCTCCCT +
Preference number: 6 (lower is better)
Translates to: NRLLRQGSHQHQ*FQSSHNTSDLP
Trigger: AGGGAGGTCACTGGTGTTGTGGCTGCTCTGGAACAACTGGTGCTGATGGCTCCCTTGGCGAAGGAGTCTGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000325954.9
ENST00000413266.6
ENST00000537376.1
ENST00000537740.1
ENST00000543675.5
ENST00000546262.6
CDS CAA 90 bp GGGTTGAAAAACAGACTCCTTCGCCAAGGGAGCCATCAGCACCAGTaGTTCCAGAGCAGCCACAACACCAGTGACCTCCCTTCTGCTTCC +
Preference number: 6 (lower is better)
Translates to: GLKNRLLRQGSHQHQ*FQSSHNTSDLPSAS
Trigger: GGAAGCAGAAGGGAGGTCACTGGTGTTGTGGCTGCTCTGGAACAACTGGTGCTGATGGCTCCCTTGGCGAAGGAGTCTGTTTTTCAACCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000325954.9
ENST00000413266.6
ENST00000537376.1
ENST00000537740.1
ENST00000543675.5
ENST00000546262.6
CDS TCA 72 bp GTAGTAACAAGGAGAGCTGCTGAGGCGTGTGAAGCCTaGCTTGGTGATGGGTTCCTGCTGGCTGGACTCAGT +
Preference number: 6 (lower is better)
Translates to: VVTRRAAEACEA*LGDGFLLAGLS
Trigger: ACTGAGTCCAGCCAGCAGGAACCCATCACCAAGTCAGGCTTCACACGCCTCAGCAGCTCTCCTTGTTACTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000325954.9
ENST00000413266.6
ENST00000540046.5
ENST00000544124.1
ENST00000545419.5
ENST00000546262.6
CDS GCA 72 bp TGCTCTAGTGCTACTTTCTCCTCCAGAACTACCCGGTaGAGCACCTGCTCCTTAGAGGCCAGCAGCAACTTG +
Preference number: 6 (lower is better)
Translates to: CSSATFSSRTTR*STCSLEASSNL
Trigger: CAAGTTGCTGCTGGCCTCTAAGGAGCAGGTGCTGCACCGGGTAGTTCTGGAGGAGAAAGTAGCACTAGAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325954.9
ENST00000413266.6
ENST00000537740.1
ENST00000542207.5
ENST00000543675.5
CDS GCA 72 bp ACGAGGCAGCGCACATTCACAGGGTGCAGGAACATATaGTGTCCATCTTCCGCTGAGGACAAGGGGCTCTAT +
Preference number: 6 (lower is better)
Translates to: TRQRTFTGCRNI*CPSSAEDKGLY
Trigger: ATAGAGCCCCTTGTCCTCAGCGGAAGATGGACAGCATATGTTCCTGCACCCTGTGAATGTGCGCTGCCTCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535395.1
CDS TCA 72 bp TCTCGGCGGCGTTCCTCCCGAGCCTTCTTTTGGCGCTaGCGTTTCCTCTTCTCAATGTCATCTGAGAACATC +
Preference number: 6 (lower is better)
Translates to: SRRRSSRAFFWR*RFLFSMSSENI
Trigger: GATGTTCTCAGATGACATTGAGAAGAGGAAACGTCAGCGCCAAAAGAAGGCTCGGGAGGAACGCCGCCGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000325954.9
ENST00000366112.6
ENST00000413266.6
ENST00000535395.1
ENST00000540046.5
ENST00000545419.5
ENST00000546262.6
CDS CCA 72 bp AGGCGTGTGAAGCCTGACTTGGTGATGGGTTCCTGCTaGCTGGACTCAGTGCAAATGGTCCCCTCTTTAAGA +
Preference number: 6 (lower is better)
Translates to: RRVKPDLVMGSC*LDSVQMVPSLR
Trigger: TCTTAAAGAGGGGACCATTTGCACTGAGTCCAGCCAGCAGGAACCCATCACCAAGTCAGGCTTCACACGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000325954.9
ENST00000413266.6
ENST00000540046.5
ENST00000544124.1
ENST00000545419.5
ENST00000546262.6
CDS CAA 72 bp CGGCCTTCATGGCGACATTTTTCCCTGTTTCCTTCCTaGGCTTCTCAAACTAGGAAGAGAAGCGGCGGACGG +
Preference number: 6 (lower is better)
Translates to: RPSWRHFSLFPS*ASQTRKRSGGR
Trigger: CCGTCCGCCGCTTCTCTTCCTAGTTTGAGAAGCCAAGGAAGGAAACAGGGAAAAATGTCGCCATGAAGGCCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000325954.9
ENST00000538796.5
CDS CAA 72 bp AGGGGAATGTGGACTTCTGGGTACTTGCCCTGTTTCTaGTTCTCCTCTATCTCAATCCTGCGCTCTCGGCGG +
Preference number: 6 (lower is better)
Translates to: RGMWTSGYLPCF*FSSISILRSRR
Trigger: CCGCCGAGAGCGCAGGATTGAGATAGAGGAGAACAAGAAACAGGGCAAGTACCCAGAAGTCCACATTCCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000325954.9
ENST00000366112.6
ENST00000413266.6
ENST00000535470.5
ENST00000540046.5
ENST00000545419.5
ENST00000546262.6
CDS CAA 90 bp GGTTCCTGCTGGCTGGACTCAGTGCAAATGGTCCCCTCTTTAAGATaGTCATCTGCTAACTCCAAGTCATCACAGGCCTCTGGCAACCCC +
Preference number: 6 (lower is better)
Translates to: GSCWLDSVQMVPSLR*SSANSKSSQASGNP
Trigger: GGGGTTGCCAGAGGCCTGTGATGACTTGGAGTTAGCAGATGACAATCTTAAAGAGGGGACCATTTGCACTGAGTCCAGCCAGCAGGAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325954.9
ENST00000413266.6
ENST00000540046.5
ENST00000544124.1
ENST00000546262.6
CDS CCA 72 bp GGCTGCAGTAGGTGGATAGAGGCATATTGGGCAAGATaGCACTTCATGGCACTTGTTCCACAAAGTCCCAGT +
Preference number: 6 (lower is better)
Translates to: GCSRWIEAYWAR*HFMALVPQSPS
Trigger: ACTGGGACTTTGTGGAACAAGTGCCATGAAGTGCCATCTTGCCCAATATGCCTCTATCCACCTACTGCAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543578.1
CDS TCA 72 bp CCACTGGAGTTCTTTCCATCCATCATCCAGAGTAGTTaGCAAGCACCTCCAGAGGGGCAACATATGGCCTTA +
Preference number: 6 (lower is better)
Translates to: PLEFFPSIIQSS*QAPPEGQHMAL
Trigger: TAAGGCCATATGTTGCCCCTCTGGAGGTGCTTGTCAACTACTCTGGATGATGGATGGAAAGAACTCCAGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537997.1
ENST00000538796.5
CDS CCA 72 bp AAGGCAGGAAACTGCTGTAGATTCTCGAGGGGAATGTaGACTTCTGGGTACTTGCCCTGTTTCTTGTTCTCC +
Preference number: 6 (lower is better)
Translates to: KAGNCCRFSRGM*TSGYLPCFLFS
Trigger: GGAGAACAAGAAACAGGGCAAGTACCCAGAAGTCCACATTCCCCTCGAGAATCTACAGCAGTTTCCTGCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000325954.9
ENST00000366112.6
ENST00000413266.6
ENST00000535470.5
ENST00000540046.5
ENST00000545419.5
ENST00000546262.6
CDS CCA 72 bp GGTTATCTTGGCTGCAGTAGGTGGATAGAGGCATATTaGGCAAGATGGCACTTCATGGCACTTGTTCCACAA +
Preference number: 6 (lower is better)
Translates to: GYLGCSRWIEAY*ARWHFMALVPQ
Trigger: TTGTGGAACAAGTGCCATGAAGTGCCATCTTGCCCAATATGCCTCTATCCACCTACTGCAGCCAAGATAACC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543578.1
CDS CAA 72 bp TGGCTGGACTCAGTGCAAATGGTCCCCTCTTTAAGATaGTCATCTGCTAACTCCAAGTCATCACAGGCCTCT +
Preference number: 6 (lower is better)
Translates to: WLDSVQMVPSLR*SSANSKSSQAS
Trigger: AGAGGCCTGTGATGACTTGGAGTTAGCAGATGACAATCTTAAAGAGGGGACCATTTGCACTGAGTCCAGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325954.9
ENST00000413266.6
ENST00000540046.5
ENST00000544124.1
ENST00000546262.6
CDS CCA 72 bp TGGGGTAGGAAAGTTCACGTTTGCGATTATAACGCTTaGATCCACTGGAGTTCTTTCCATCGCTCTTGGGTT +
Preference number: 6 (lower is better)
Translates to: WGRKVHVCDYNA*IHWSSFHRSWV
Trigger: AACCCAAGAGCGATGGAAAGAACTCCAGTGGATCCAAGCGTTATAATCGCAAACGTGAACTTTCCTACCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325954.9
ENST00000413266.6
ENST00000536869.5
ENST00000551139.6
CDS CAA 90 bp AACACTGCACAGAAGGCACAAGAGATTCTTACTGAGACCCTCAAATaGGGAATTCCGACTTTCTGGTTAAGTTTTTCTGCCCTTCCTGGG +
Preference number: 6 (lower is better)
Translates to: NTAQKAQEILTETLK*GIPTFWLSFSALPG
Trigger: CCCAGGAAGGGCAGAAAAACTTAACCAGAAAGTCGGAATTCCCAATTTGAGGGTCTCAGTAAGAATCTCTTGTGCCTTCTGTGCAGTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000542701.1
CDS CCA 72 bp TGGGGTAGGAAAGTTCACGTTTGCGATTATAACGCTTaGATCCACTGGAGTTCTTTCCATCCATCATCCAGA +
Preference number: 6 (lower is better)
Translates to: WGRKVHVCDYNA*IHWSSFHPSSR
Trigger: TCTGGATGATGGATGGAAAGAACTCCAGTGGATCCAAGCGTTATAATCGCAAACGTGAACTTTCCTACCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537997.1
ENST00000538796.5
CDS CCA 72 bp CTTACTGAGACCCTCAAATTGGGAATTCCGACTTTCTaGTTAAGTTTTTCTGCCCTTCCTGGGACCCCTAAA +
Preference number: 6 (lower is better)
Translates to: LTETLKLGIPTF*LSFSALPGTPK
Trigger: TTTAGGGGTCCCAGGAAGGGCAGAAAAACTTAACCAGAAAGTCGGAATTCCCAATTTGAGGGTCTCAGTAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000542701.1
CDS TCA 72 bp GCTTCAAGTCCAGCCAAATTCCCCAAAGGCATCCCTTaGACTAAAATTAACCTAGACCGTGACTCCATCAAA +
Preference number: 6 (lower is better)
Translates to: ASSPAKFPKGIP*TKINLDRDSIK
Trigger: TTTGATGGAGTCACGGTCTAGGTTAATTTTAGTTCAAGGGATGCCTTTGGGGAATTTGGCTGGACTTGAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535417.1
CDS CAA 72 bp TTAAGTAGCTGGTCCAACTTCTTTTTCAGACCTACCTaGACTAACTGGAGAGGCACAGAACCAACTATCACC +
Preference number: 6 (lower is better)
Translates to: LSSWSNFFFRPT*TNWRGTEPTIT
Trigger: GGTGATAGTTGGTTCTGTGCCTCTCCAGTTAGTCAAGGTAGGTCTGAAAAAGAAGTTGGACCAGCTACTTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000542701.1
CDS TCA 72 bp AAAGAACACTGCACAGAAGGCACAAGAGATTCTTACTaGGACCCTCAAATTGGGAATTCCGACTTTCTGGTT +
Preference number: 6 (lower is better)
Translates to: KEHCTEGTRDSY*DPQIGNSDFLV
Trigger: AACCAGAAAGTCGGAATTCCCAATTTGAGGGTCTCAGTAAGAATCTCTTGTGCCTTCTGTGCAGTGTTCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542701.1
CDS CCA 72 bp AAAGTTCACGTTTGCGATTATAACGCTTGGATCCACTaGAGTTCTTTCCATCCATCATCCAGAGTAGTTGAC +
Preference number: 6 (lower is better)
Translates to: KVHVCDYNAWIH*SSFHPSSRVVD
Trigger: GTCAACTACTCTGGATGATGGATGGAAAGAACTCCAGTGGATCCAAGCGTTATAATCGCAAACGTGAACTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537997.1
ENST00000538796.5
CDS CCA 72 bp TGGTCCAACTTCTTTTTCAGACCTACCTTGACTAACTaGAGAGGCACAGAACCAACTATCACCTTTGAAAAG +
Preference number: 6 (lower is better)
Translates to: WSNFFFRPTLTN*RGTEPTITFEK
Trigger: CTTTTCAAAGGTGATAGTTGGTTCTGTGCCTCTCCAGTTAGTCAAGGTAGGTCTGAAAAAGAAGTTGGACCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000542701.1
CDS CAA 72 bp CGGCCTTCATGGCGACATTTTTCCCTGTTTCCTTCCTaGGCTTCTCAAAATTTAATATCACTTTACGGCACT +
Preference number: 6 (lower is better)
Translates to: RPSWRHFSLFPS*ASQNLISLYGT
Trigger: AGTGCCGTAAAGTGATATTAAATTTTGAGAAGCCAAGGAAGGAAACAGGGAAAAATGTCGCCATGAAGGCCG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000539486.1
CDS CAA 72 bp CAGAAGGCACAAGAGATTCTTACTGAGACCCTCAAATaGGGAATTCCGACTTTCTGGTTAAGTTTTTCTGCC +
Preference number: 6 (lower is better)
Translates to: QKAQEILTETLK*GIPTFWLSFSA
Trigger: GGCAGAAAAACTTAACCAGAAAGTCGGAATTCCCAATTTGAGGGTCTCAGTAAGAATCTCTTGTGCCTTCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000542701.1
CDS CAA 90 bp GGAGAGAATTTAAGTAGCTGGTCCAACTTCTTTTTCAGACCTACCTaGACTAACTGGAGAGGCACAGAACCAACTATCACCTTTGAAAAG +
Preference number: 6 (lower is better)
Translates to: GENLSSWSNFFFRPT*TNWRGTEPTITFEK
Trigger: CTTTTCAAAGGTGATAGTTGGTTCTGTGCCTCTCCAGTTAGTCAAGGTAGGTCTGAAAAAGAAGTTGGACCAGCTACTTAAATTCTCTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000542701.1
CDS TCA 72 bp ACCACATGGCTACTAAACTTCAGTTACCTAAAGCCATaGAAACTAACTAAACTCTCTCCTGACACCGCTTCA +
Preference number: 6 (lower is better)
Translates to: TTWLLNFSYLKP*KLTKLSPDTAS
Trigger: TGAAGCGGTGTCAGGAGAGAGTTTAGTTAGTTTTCATGGCTTTAGGTAACTGAAGTTTAGTAGCCATGTGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366112.6
CDS TCA 72 bp AAGCATACAGAAAATACTCATTGTCCCCTCTTCTCTTaGGAAGGTTTAGATCTCACAGTAATGCCTACCAGC +
Preference number: 6 (lower is better)
Translates to: KHTENTHCPLFS*EGLDLTVMPTS
Trigger: GCTGGTAGGCATTACTGTGAGATCTAAACCTTCTCAAGAGAAGAGGGGACAATGAGTATTTTCTGTATGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537376.1
CDS CAA 72 bp ATGAGCTGTGTAGTCTTGGTCTTCAGACACCACAAATaGGCAGCTAGAAATAGGAAAGACAGGAAAAAGCTA +
Preference number: 6 (lower is better)
Translates to: MSCVVLVFRHHK*AARNRKDRKKL
Trigger: TAGCTTTTTCCTGTCTTTCCTATTTCTAGCTGCCAATTTGTGGTGTCTGAAGACCAAGACTACACAGCTCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000535417.1
CDS CAA 72 bp CAAGCATACAGAAAATACTCATTGTCCCCTCTTCTCTaGAGAAGGTTTAGATCTCACAGTAATGCCTACCAG +
Preference number: 6 (lower is better)
Translates to: QAYRKYSLSPLL*RRFRSHSNAYQ
Trigger: CTGGTAGGCATTACTGTGAGATCTAAACCTTCTCAAGAGAAGAGGGGACAATGAGTATTTTCTGTATGCTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537376.1
CDS CAA 90 bp AGAGGGGCAACATATGGCCTTACTACAGAATCAACTGACAACAAATaGAATCCAGCTGAAATTAGTAATTTCAAGGTCTGGCAAACTGGG +
Preference number: 6 (lower is better)
Translates to: RGATYGLTTESTDNK*NPAEISNFKVWQTG
Trigger: CCCAGTTTGCCAGACCTTGAAATTACTAATTTCAGCTGGATTCAATTTGTTGTCAGTTGATTCTGTAGTAAGGCCATATGTTGCCCCTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537997.1
CDS CAA 90 bp AGAGGGGCAACATATGGCCTTACTACAGAATCAACTGACAACAAATaGAATCCAGCTGAAATTAGTAATTCGCTCTTGGGTTTAGACTCG +
Preference number: 6 (lower is better)
Translates to: RGATYGLTTESTDNK*NPAEISNSLLGLDS
Trigger: CGAGTCTAAACCCAAGAGCGAATTACTAATTTCAGCTGGATTCAATTTGTTGTCAGTTGATTCTGTAGTAAGGCCATATGTTGCCCCTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538796.5
ENST00000542438.1
CDS CAA 90 bp AAAAAGCTAGACTGTCAGGATCTACCAATAAACCCTCAGCAGAAATaGTCATCTATTCACTTAGAAATCAAATGCAGGCCATTAGCAGCC +
Preference number: 6 (lower is better)
Translates to: KKLDCQDLPINPQQK*SSIHLEIKCRPLAA
Trigger: GGCTGCTAATGGCCTGCATTTGATTTCTAAGTGAATAGATGACAATTTCTGCTGAGGGTTTATTGGTAGATCCTGACAGTCTAGCTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000535417.1
CDS TCA 72 bp CATATGGCCTTACTACAGAATCAACTGACAACAAATTaGATCCAGCTGAAATTAGTAATTTCAAGGTCTGGC +
Preference number: 6 (lower is better)
Translates to: HMALLQNQLTTN*IQLKLVISRSG
Trigger: GCCAGACCTTGAAATTACTAATTTCAGCTGGATTCAATTTGTTGTCAGTTGATTCTGTAGTAAGGCCATATG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537997.1
CDS TCA 72 bp CATATGGCCTTACTACAGAATCAACTGACAACAAATTaGATCCAGCTGAAATTAGTAATTCGCTCTTGGGTT +
Preference number: 6 (lower is better)
Translates to: HMALLQNQLTTN*IQLKLVIRSWV
Trigger: AACCCAAGAGCGAATTACTAATTTCAGCTGGATTCAATTTGTTGTCAGTTGATTCTGTAGTAAGGCCATATG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000538796.5
ENST00000542438.1