Pregenerated sensors for RND1 (Homo sapiens)
Ensembl gene IDs: ENSG00000172602Ensembl transcript IDs: ENST00000309739.6, ENST00000548445.1, ENST00000550607.5, ENST00000551243.1, ENST00000553260.1, ENST00000649147.1
Found 184 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TCCGATTGCAGTTACGAAGCACCTGGGCTAAGCCCCCAAGGGAGCTaGCGCTCCACTTCCCCACTCTCCGTTGCTGCCTCCTTAGAGGGG | + |
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Preference number: 1 (lower is better) Translates to: SDCSYEAPGLSPQGS*RSTSPLSVAASLEG Trigger: CCCCTCTAAGGAGGCAGCAACGGAGAGTGGGGAAGTGGAGCGGCAGCTCCCTTGGGGGCTTAGCCCAGGTGCTTCGTAACTGCAATCGGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000309739.6 |
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| 3UTR CCA 90 bp | GGCTCTGACCAGCTCCTGCACTTCCGATTGCAGTTACGAAGCACCTaGGCTAAGCCCCCAAGGGAGCTGCCGCTCCACTTCCCCACTCTC | + |
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Preference number: 1 (lower is better) Translates to: GSDQLLHFRLQLRST*AKPPRELPLHFPTL Trigger: GAGAGTGGGGAAGTGGAGCGGCAGCTCCCTTGGGGGCTTAGCCCAGGTGCTTCGTAACTGCAATCGGAAGTGCAGGAGCTGGTCAGAGCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000309739.6 |
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| 3UTR GCA 90 bp | GAGGTTTCCTTCTCATTGGCTCTGACCAGCTCCTGCACTTCCGATTaGAGTTACGAAGCACCTGGGCTAAGCCCCCAAGGGAGCTGCCGC | + |
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Preference number: 1 (lower is better) Translates to: EVSFSLALTSSCTSD*SYEAPGLSPQGSCR Trigger: GCGGCAGCTCCCTTGGGGGCTTAGCCCAGGTGCTTCGTAACTGCAATCGGAAGTGCAGGAGCTGGTCAGAGCCAATGAGAAGGAAACCTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000309739.6 |
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| 3UTR TCA 90 bp | CCTCGCCCCATTCCTGTCTCCTTCCAAGCCCTCACCGTGGCCATCTaGAAAACTCATGTCCAGTGTCCTAAATTGTCTCATCCTCCCTCT | + |
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Preference number: 1 (lower is better) Translates to: PRPIPVSFQALTVAI*KTHVQCPKLSHPPS Trigger: AGAGGGAGGATGAGACAATTTAGGACACTGGACATGAGTTTTTCAGATGGCCACGGTGAGGGCTTGGAAGGAGACAGGAATGGGGCGAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000309739.6 |
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| 3UTR CCA 90 bp | GGCTCCTTCCTCGCCCCATTCCTGTCTCCTTCCAAGCCCTCACCGTaGCCATCTGAAAAACTCATGTCCAGTGTCCTAAATTGTCTCATC | + |
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Preference number: 1 (lower is better) Translates to: GSFLAPFLSPSKPSP*PSEKLMSSVLNCLI Trigger: GATGAGACAATTTAGGACACTGGACATGAGTTTTTCAGATGGCCACGGTGAGGGCTTGGAAGGAGACAGGAATGGGGCGAGGAAGGAGCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000309739.6 |
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| 3UTR GCA 90 bp | CTATGCAAAGATGAGGTTTCCTTCTCATTGGCTCTGACCAGCTCCTaGACTTCCGATTGCAGTTACGAAGCACCTGGGCTAAGCCCCCAA | + |
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Preference number: 1 (lower is better) Translates to: LCKDEVSFSLALTSS*TSDCSYEAPGLSPQ Trigger: TTGGGGGCTTAGCCCAGGTGCTTCGTAACTGCAATCGGAAGTGCAGGAGCTGGTCAGAGCCAATGAGAAGGAAACCTCATCTTTGCATAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000309739.6 |
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| 3UTR TCA 90 bp | CCATCAGAGTACTCAGGTCTGTTCGCAGGTCTGTCTTGCAGCCAATaGGCAAAACGCGGGTGCTGGGACAATAATCTAGGATTTCTGTCC | + |
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Preference number: 1 (lower is better) Translates to: PSEYSGLFAGLSCSQ*AKRGCWDNNLGFLS Trigger: GGACAGAAATCCTAGATTATTGTCCCAGCACCCGCGTTTTGCTCATTGGCTGCAAGACAGACCTGCGAACAGACCTGAGTACTCTGATGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000551243.1 |
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| 3UTR TCA 90 bp | GAATGTATGATGTCACCTCTCCATGAGGCATGGGCTATGCAAAGATaGGGTTTCCTTCTCATTGGCTCTGACCAGCTCCTGCACTTCCGA | + |
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Preference number: 1 (lower is better) Translates to: ECMMSPLHEAWAMQR*GFLLIGSDQLLHFR Trigger: TCGGAAGTGCAGGAGCTGGTCAGAGCCAATGAGAAGGAAACCTCATCTTTGCATAGCCCATGCCTCATGGAGAGGTGACATCATACATTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000309739.6 |
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| 3UTR TCA 90 bp | TCTCCCTTGGACCCTGGGGACTTAGGTGAGAAGCATGTGAATGTATaGTGTCACCTCTCCATGAGGCATGGGCTATGCAAAGATGAGGTT | + |
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Preference number: 1 (lower is better) Translates to: SPLDPGDLGEKHVNV*CHLSMRHGLCKDEV Trigger: AACCTCATCTTTGCATAGCCCATGCCTCATGGAGAGGTGACATCATACATTCACATGCTTCTCACCTAAGTCCCCAGGGTCCAAGGGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000309739.6 |
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| 3UTR-3UTR GCA 90 bp | CTAGTGCCTGGCTTGGGGTATGATGGTTCTCTCTCAGCGTCAGGTCCTCATGCCTCCTCCCTCTCCCCGTaGCTCTGCACCCCAAGGGAG | + |
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Preference number: 2 (lower is better) Translates to: LVPGLGYDGSLSASGPHASSLSP*LCTPRE Trigger: CTCCCTTGGGGTGCAGAGGCACGGGGAGAGGGAGGA...GGCATGAGGACCTGACGCTGAGAGAGAACCATCATACCCCAAGCCAGGCACTAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000309739.6 |
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| 3UTR-3UTR CCA 90 bp | TGCATCCGAGTCGCTGTAGCAGAGTGGACGGACATTATCGTAGTAGGGAGATCCAGGGACGCAGGAAGGTaGAGGGGATCTGATGGGTCC | + |
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Preference number: 2 (lower is better) Translates to: CIRVAVAEWTDIIVVGRSRDAGR*RGSDGS Trigger: GGACCCATCAGATCCCCTCCACCTTCCTGCGTCCCT...GGATCTCCCTACTACGATAATGTCCGTCCACTCTGCTACAGCGACTCGGATGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000551243.1 |
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| 3UTR-3UTR TCA 90 bp | GATTTCTGTCCTCCACTTCTTGAGTGCGCTGTCCACTGTCTCTGGACGGCTGATAAGGTGGAGGGGATCTaGTGGGTCCTCTGGGTGAAG | + |
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Preference number: 2 (lower is better) Translates to: DFCPPLLECAVHCLWTADKVEGI*WVLWVK Trigger: CTTCACCCAGAGGACCCATCAGATCCCCTCCACCTT...ATCAGCCGTCCAGAGACAGTGGACAGCGCACTCAAGAAGTGGAGGACAGAAATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000551243.1 |
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| 3UTR-3UTR GCA 90 bp | TCCTTCTCATTGGCTCTGACCAGCTCCTGCACTTCCGATTGCAGTTACGAAGCACCCACTCTCCGTTGCTaGCTCCTTAGAGGGGAAGGG | + |
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Preference number: 2 (lower is better) Translates to: SFSLALTSSCTSDCSYEAPTLRC*LLRGEG Trigger: CCCTTCCCCTCTAAGGAGGCAGCAACGGAGAGTGGG...TGCTTCGTAACTGCAATCGGAAGTGCAGGAGCTGGTCAGAGCCAATGAGAAGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000309739.6 |
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| 3UTR-3UTR TCA 90 bp | ACCAGCTCCTGCACTTCCGATTGCAGTTACGAAGCACCTGGGCTAAGCCCCCAACTCACCGTGGCCATCTaGAAAACTCATGTCCAGTGT | + |
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Preference number: 2 (lower is better) Translates to: TSSCTSDCSYEAPGLSPQLTVAI*KTHVQC Trigger: ACACTGGACATGAGTTTTTCAGATGGCCACGGTGAG...TTGGGGGCTTAGCCCAGGTGCTTCGTAACTGCAATCGGAAGTGCAGGAGCTGGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000309739.6 |
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| 3UTR-3UTR GCA 90 bp | TGCAAAGATGAGGTTTCCTTCTCATTGGCTCTGACCAGCTCCTGCACTTCCGATCTCTCCCCGTGCCTCTaGACCCCAAGGGAGGAAGTA | + |
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Preference number: 2 (lower is better) Translates to: CKDEVSFSLALTSSCTSDLSPCL*TPREEV Trigger: TACTTCCTCCCTTGGGGTGCAGAGGCACGGGGAGAG...ATCGGAAGTGCAGGAGCTGGTCAGAGCCAATGAGAAGGAAACCTCATCTTTGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000309739.6 |
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| 3UTR-3UTR CCA 90 bp | CTTCTCATTGGCTCTGACCAGCTCCTGCACTTCCGATTGCAGTTACGAAGCACCTCCAAGCCCTCACCGTaGCCATCTGAAAAACTCATG | + |
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Preference number: 2 (lower is better) Translates to: LLIGSDQLLHFRLQLRSTSKPSP*PSEKLM Trigger: CATGAGTTTTTCAGATGGCCACGGTGAGGGCTTGGA...GGTGCTTCGTAACTGCAATCGGAAGTGCAGGAGCTGGTCAGAGCCAATGAGAAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000309739.6 |
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| 3UTR CAA 90 bp | CTCTCCATGAGGCATGGGCTATGCAAAGATGAGGTTTCCTTCTCATaGGCTCTGACCAGCTCCTGCACTTCCGATTGCAGTTACGAAGCA | + |
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Preference number: 2 (lower is better) Translates to: LSMRHGLCKDEVSFS*ALTSSCTSDCSYEA Trigger: TGCTTCGTAACTGCAATCGGAAGTGCAGGAGCTGGTCAGAGCCAATGAGAAGGAAACCTCATCTTTGCATAGCCCATGCCTCATGGAGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000309739.6 |
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| 3UTR-3UTR CCA 90 bp | CCAAAGACAAGAGTCTATAAAACAAATGCCAGCTGTACTACCCTAAGGGCAGAATCCTCATGCCGGGCCTaGCTCCTTCCTCGCCCCATT | + |
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Preference number: 2 (lower is better) Translates to: PKTRVYKTNASCTTLRAESSCRA*LLPRPI Trigger: AATGGGGCGAGGAAGGAGCCAGGCCCGGCATGAGGA...TTCTGCCCTTAGGGTAGTACAGCTGGCATTTGTTTTATAGACTCTTGTCTTTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000309739.6 |
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| 3UTR-3UTR CCA 90 bp | ATACTGCATCCGAGTCGCTGTAGCAGAGTGGACGGACATTATCGTAGTAGGGAGAATTTTCGAACACGGTaGGCACATAGGTCTGAGAGC | + |
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Preference number: 2 (lower is better) Translates to: ILHPSRCSRVDGHYRSRENFRTR*AHRSES Trigger: GCTCTCAGACCTATGTGCCCACCGTGTTCGAAAATT...CTCCCTACTACGATAATGTCCGTCCACTCTGCTACAGCGACTCGGATGCAGTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000551243.1 |
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| 3UTR-3UTR TCA 90 bp | CCAAAGACAAGAGTCTATAAAACAAATGCCAGCTGTACTACCCTAAGGGCAGAAGCCTGGCTTGGGGTATaGTGGTTCTCTCTCAGCGTC | + |
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Preference number: 2 (lower is better) Translates to: PKTRVYKTNASCTTLRAEAWLGV*WFSLSV Trigger: GACGCTGAGAGAGAACCATCATACCCCAAGCCAGGC...TTCTGCCCTTAGGGTAGTACAGCTGGCATTTGTTTTATAGACTCTTGTCTTTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000309739.6 |
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| 3UTR-3UTR TCA 90 bp | CCAAAGACAAGAGTCTATAAAACAAATGCCAGCTGTACTACCCTAAGGGCAGAAAAGCATGTGAATGTATaGTGTCACCTCTCCATGAGG | + |
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Preference number: 2 (lower is better) Translates to: PKTRVYKTNASCTTLRAEKHVNV*CHLSMR Trigger: CCTCATGGAGAGGTGACATCATACATTCACATGCTT...TTCTGCCCTTAGGGTAGTACAGCTGGCATTTGTTTTATAGACTCTTGTCTTTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000309739.6 |
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| 3UTR GCA 72 bp | CCAAGGGAGCTGCCGCTCCACTTCCCCACTCTCCGTTaGTGCCTCCTTAGAGGGGAAGGGAAGGGCTCAGGG | + |
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Preference number: 3 (lower is better) Translates to: PRELPLHFPTLR*CLLRGEGKGSG Trigger: CCCTGAGCCCTTCCCTTCCCCTCTAAGGAGGCAGCAACGGAGAGTGGGGAAGTGGAGCGGCAGCTCCCTTGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000309739.6 |
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| 3UTR CCA 72 bp | TGGTTCTCTCTCAGCGTCAGGTCCTCATGCCGGGCCTaGCTCCTTCCTCGCCCCATTCCTGTCTCCTTCCAA | + |
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Preference number: 3 (lower is better) Translates to: WFSLSVRSSCRA*LLPRPIPVSFQ Trigger: TTGGAAGGAGACAGGAATGGGGCGAGGAAGGAGCCAGGCCCGGCATGAGGACCTGACGCTGAGAGAGAACCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000309739.6 |
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| 3UTR CCA 72 bp | CAGCTCCTGCACTTCCGATTGCAGTTACGAAGCACCTaGGCTAAGCCCCCAAGGGAGCTGCCGCTCCACTTC | + |
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Preference number: 3 (lower is better) Translates to: QLLHFRLQLRST*AKPPRELPLHF Trigger: GAAGTGGAGCGGCAGCTCCCTTGGGGGCTTAGCCCAGGTGCTTCGTAACTGCAATCGGAAGTGCAGGAGCTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000309739.6 |
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| 3UTR-3UTR CAA 90 bp | CCTGGCTTGGGGTATGATGGTTCTCTCTCAGCGTCAGGTCCTCATGCCGGGCCTGTCCAGTGTCCTAAATaGTCTCATCCTCCCTCTCCC | + |
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Preference number: 3 (lower is better) Translates to: PGLGYDGSLSASGPHAGPVQCPK*SHPPSP Trigger: GGGAGAGGGAGGATGAGACAATTTAGGACACTGGAC...AGGCCCGGCATGAGGACCTGACGCTGAGAGAGAACCATCATACCCCAAGCCAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000309739.6 |
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| 3UTR CCA 72 bp | CCCCTCCCATCCCCTGACCTGCATGGAAACGCTGTGTaGAAGAGGCATGAAGCTGAAGGTGAGGCTGCTGTA | + |
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Preference number: 3 (lower is better) Translates to: PLPSPDLHGNAV*KRHEAEGEAAV Trigger: TACAGCAGCCTCACCTTCAGCTTCATGCCTCTTCCACACAGCGTTTCCATGCAGGTCAGGGGATGGGAGGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000309739.6 |
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| 3UTR GCA 72 bp | TTCTCATTGGCTCTGACCAGCTCCTGCACTTCCGATTaGAGTTACGAAGCACCTGGGCTAAGCCCCCAAGGG | + |
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Preference number: 3 (lower is better) Translates to: FSLALTSSCTSD*SYEAPGLSPQG Trigger: CCCTTGGGGGCTTAGCCCAGGTGCTTCGTAACTGCAATCGGAAGTGCAGGAGCTGGTCAGAGCCAATGAGAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000309739.6 |
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| 3UTR CCA 72 bp | CTGTCTCCAAACAGGCTGTGTAATTTTCGAACACGGTaGGCACATAGGTCTGAGAGCAGACTCCAGGGACGC | + |
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Preference number: 3 (lower is better) Translates to: LSPNRLCNFRTR*AHRSESRLQGR Trigger: GCGTCCCTGGAGTCTGCTCTCAGACCTATGTGCCCACCGTGTTCGAAAATTACACAGCCTGTTTGGAGACAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000551243.1 |
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| 3UTR TCA 72 bp | TACTCAGGTCTGTTCGCAGGTCTGTCTTGCAGCCAATaGGCAAAACGCGGGTGCTGGGACAATAATCTAGGA | + |
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Preference number: 3 (lower is better) Translates to: YSGLFAGLSCSQ*AKRGCWDNNLG Trigger: TCCTAGATTATTGTCCCAGCACCCGCGTTTTGCTCATTGGCTGCAAGACAGACCTGCGAACAGACCTGAGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000551243.1 |
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| 3UTR TCA 72 bp | GACCCTGGGGACTTAGGTGAGAAGCATGTGAATGTATaGTGTCACCTCTCCATGAGGCATGGGCTATGCAAA | + |
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Preference number: 3 (lower is better) Translates to: DPGDLGEKHVNV*CHLSMRHGLCK Trigger: TTTGCATAGCCCATGCCTCATGGAGAGGTGACATCATACATTCACATGCTTCTCACCTAAGTCCCCAGGGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000309739.6 |
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| CDS-3UTR CCA 90 bp | GCTCCTTCCTCGCCCCATTCCTGTCTCCTTCCAAGCCCTCACCGTGGCCATCTGCTGGCCACGACTGGCTaGGGGGCCCGTCTCTCCTTC | + |
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Preference number: 4 (lower is better) Translates to: APSSPHSCLLPSPHRGHLLATTG*GARLSF Trigger: GAAGGAGAGACGGGCCCCCCAGCCAGTCGTGGCCAG...CAGATGGCCACGGTGAGGGCTTGGAAGGAGACAGGAATGGGGCGAGGAAGGAGC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000309739.6 |
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| CDS-3UTR GCA 90 bp | CAGTTACGAAGCACCTGGGCTAAGCCCCCAAGGGAGCTGCCGCTCCACTTCCCCGCGGTCTTCCCACACTaGACGTCCCCGACCAGAACG | + |
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Preference number: 4 (lower is better) Translates to: QLRSTWAKPPRELPLHFPAVFPH*TSPTRT Trigger: CGTTCTGGTCGGGGACGTGCAGTGTGGGAAGACCGC...GGGGAAGTGGAGCGGCAGCTCCCTTGGGGGCTTAGCCCAGGTGCTTCGTAACTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000309739.6 |
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| CDS-3UTR CCA 90 bp | GCGTCAGGTCCTCATGCCGGGCCTGGCTCCTTCCTCGCCCCATTCCTGTCTCCTGAGCGACTGGGGAGGTaGAGCAGTCGTTTGGAGAGG | + |
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Preference number: 4 (lower is better) Translates to: ASGPHAGPGSFLAPFLSPERLGR*SSRLER Trigger: CCTCTCCAAACGACTGCTCCACCTCCCCAGTCGCTC...AGGAGACAGGAATGGGGCGAGGAAGGAGCCAGGCCCGGCATGAGGACCTGACGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000309739.6 |
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| CDS-3UTR TCA 90 bp | GCGTCAGGTCCTCATGCCGGGCCTGGCTCCTTCCTCGCCCCATTCCTGTCTCCTGCCTGGCTTGGGGTATaGTGGTTCTCTCTCAGCGTC | + |
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Preference number: 4 (lower is better) Translates to: ASGPHAGPGSFLAPFLSPAWLGV*WFSLSV Trigger: GACGCTGAGAGAGAACCATCATACCCCAAGCCAGGC...AGGAGACAGGAATGGGGCGAGGAAGGAGCCAGGCCCGGCATGAGGACCTGACGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000309739.6 |
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| CDS-3UTR CCA 90 bp | CAGTTACGAAGCACCTGGGCTAAGCCCCCAAGGGAGCTGCCGCTCCACTTCCCCGGTGGAGCAGTCGTTTaGAGAGGCTTCGGACAGGGC | + |
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Preference number: 4 (lower is better) Translates to: QLRSTWAKPPRELPLHFPGGAVV*RGFGQG Trigger: GCCCTGTCCGAAGCCTCTCCAAACGACTGCTCCACC...GGGGAAGTGGAGCGGCAGCTCCCTTGGGGGCTTAGCCCAGGTGCTTCGTAACTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000309739.6 |
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| CDS-3UTR CCA 90 bp | CCTGGCTTGGGGTATGATGGTTCTCTCTCAGCGTCAGGTCCTCATGCCGGGCCTTCCTCATGCCGGGCCTaGCTCCTTCCTCGCCCCATT | + |
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Preference number: 4 (lower is better) Translates to: PGLGYDGSLSASGPHAGPSSCRA*LLPRPI Trigger: AATGGGGCGAGGAAGGAGCCAGGCCCGGCATGAGGA...AGGCCCGGCATGAGGACCTGACGCTGAGAGAGAACCATCATACCCCAAGCCAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000309739.6 |
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| CDS-3UTR CCA 90 bp | CAGTTACGAAGCACCTGGGCTAAGCCCCCAAGGGAGCTGCCGCTCCACTTCCCCCAGTTACGAAGCACCTaGGCTAAGCCCCCAAGGGAG | + |
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Preference number: 4 (lower is better) Translates to: QLRSTWAKPPRELPLHFPQLRST*AKPPRE Trigger: CTCCCTTGGGGGCTTAGCCCAGGTGCTTCGTAACTG...GGGGAAGTGGAGCGGCAGCTCCCTTGGGGGCTTAGCCCAGGTGCTTCGTAACTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENST00000309739.6 |
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| CDS-3UTR CCA 90 bp | GGCTCCTTCCTCGCCCCATTCCTGTCTCCTTCCAAGCCCTCACCGTGGCCATCTCAAGAGAAGGGGGTCTaGGGCTTCTCCCTTGGACCC | + |
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Preference number: 4 (lower is better) Translates to: GSFLAPFLSPSKPSPWPSQEKGV*GFSLGP Trigger: GGGTCCAAGGGAGAAGCCCCAGACCCCCTTCTCTTG...AGATGGCCACGGTGAGGGCTTGGAAGGAGACAGGAATGGGGCGAGGAAGGAGCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000309739.6 |
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| CDS-3UTR GCA 90 bp | CTGACCAGCTCCTGCACTTCCGATTGCAGTTACGAAGCACCTGGGCTAAGCCCCAGCGTCAGGTCCTCATaGCGGGCCTGGCTCCTTCCT | + |
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Preference number: 4 (lower is better) Translates to: LTSSCTSDCSYEAPGLSPSVRSS*RAWLLP Trigger: AGGAAGGAGCCAGGCCCGGCATGAGGACCTGACGCT...GGGGCTTAGCCCAGGTGCTTCGTAACTGCAATCGGAAGTGCAGGAGCTGGTCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000309739.6 |
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| CDS-3UTR GCA 90 bp | TCCTCGCCCCATTCCTGTCTCCTTCCAAGCCCTCACCGTGGCCATCTGAAAAACAGCCCCCAAGGGAGCTaGCGCTCCACTTCCCCACTC | + |
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Preference number: 4 (lower is better) Translates to: SSPHSCLLPSPHRGHLKNSPQGS*RSTSPL Trigger: GAGTGGGGAAGTGGAGCGGCAGCTCCCTTGGGGGCT...GTTTTTCAGATGGCCACGGTGAGGGCTTGGAAGGAGACAGGAATGGGGCGAGGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000309739.6 |
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| CDS-3UTR GCA 90 bp | AGCTCCTGCACTTCCGATTGCAGTTACGAAGCACCTGGGCTAAGCCCCCAAGGGGAGGGTTGCGCCAGGTaGGTCTCAGCACGCCAATCA | + |
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Preference number: 4 (lower is better) Translates to: SSCTSDCSYEAPGLSPQGEGCAR*VSARQS Trigger: TGATTGGCGTGCTGAGACGCACCTGGCGCAACCCTC...CCCTTGGGGGCTTAGCCCAGGTGCTTCGTAACTGCAATCGGAAGTGCAGGAGCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000309739.6 |
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| CDS-3UTR GCA 90 bp | CTGACCAGCTCCTGCACTTCCGATTGCAGTTACGAAGCACCTGGGCTAAGCCCCCCCACTCTCCGTTGCTaGCTCCTTAGAGGGGAAGGG | + |
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Preference number: 4 (lower is better) Translates to: LTSSCTSDCSYEAPGLSPPTLRC*LLRGEG Trigger: CCCTTCCCCTCTAAGGAGGCAGCAACGGAGAGTGGG...GGGGCTTAGCCCAGGTGCTTCGTAACTGCAATCGGAAGTGCAGGAGCTGGTCAG 60% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENST00000309739.6 |
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| CDS-3UTR GCA 90 bp | CAGTTACGAAGCACCTGGGCTAAGCCCCCAAGGGAGCTGCCGCTCCACTTCCCCTCCTGCACTTCCGATTaGAGTTACGAAGCACCTGGG | + |
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Preference number: 4 (lower is better) Translates to: QLRSTWAKPPRELPLHFPSCTSD*SYEAPG Trigger: CCCAGGTGCTTCGTAACTGCAATCGGAAGTGCAGGA...GGGGAAGTGGAGCGGCAGCTCCCTTGGGGGCTTAGCCCAGGTGCTTCGTAACTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000309739.6 |
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| CDS-3UTR CCA 90 bp | TGTAATTTTCGAACACGGTGGGCACATAGGTCTGAGAGCAGACTCCAGGGACGCCTGGCCACGACTGGCTaGGGGGCCCGTCTCTCCTTC | + |
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Preference number: 4 (lower is better) Translates to: CNFRTRWAHRSESRLQGRLATTG*GARLSF Trigger: GAAGGAGAGACGGGCCCCCCAGCCAGTCGTGGCCAG...GCGTCCCTGGAGTCTGCTCTCAGACCTATGTGCCCACCGTGTTCGAAAATTACA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000551243.1 |
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| CDS-3UTR CCA 90 bp | CTAGTGCCTGGCTTGGGGTATGATGGTTCTCTCTCAGCGTCAGGTCCTCATGCCCGGACAGGGCTCTTCTaGGGCAGTGGGCTAGGCTTG | + |
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Preference number: 4 (lower is better) Translates to: LVPGLGYDGSLSASGPHARTGLF*GSGLGL Trigger: CAAGCCTAGCCCACTGCCCCAGAAGAGCCCTGTCCG...GGCATGAGGACCTGACGCTGAGAGAGAACCATCATACCCCAAGCCAGGCACTAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000309739.6 |
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| CDS-3UTR TCA 90 bp | CCTTCCTCGCCCCATTCCTGTCTCCTTCCAAGCCCTCACCGTGGCCATCTGAAACTGTCTTGCAGCCAATaGGCAAAACGCGGGTGCTGG | + |
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Preference number: 4 (lower is better) Translates to: PSSPHSCLLPSPHRGHLKLSCSQ*AKRGCW Trigger: CCAGCACCCGCGTTTTGCTCATTGGCTGCAAGACAG...TTTCAGATGGCCACGGTGAGGGCTTGGAAGGAGACAGGAATGGGGCGAGGAAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000309739.6 |
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| CDS-3UTR TCA 90 bp | CTGACCAGCTCCTGCACTTCCGATTGCAGTTACGAAGCACCTGGGCTAAGCCCCCCTTCTCATTGGCTCTaGCCAGCTCCTGCACTTCCG | + |
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Preference number: 4 (lower is better) Translates to: LTSSCTSDCSYEAPGLSPPSHWL*PAPALP Trigger: CGGAAGTGCAGGAGCTGGTCAGAGCCAATGAGAAGG...GGGGCTTAGCCCAGGTGCTTCGTAACTGCAATCGGAAGTGCAGGAGCTGGTCAG 59% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENST00000309739.6 |
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| CDS-3UTR GCA 90 bp | AGCTCCTGCACTTCCGATTGCAGTTACGAAGCACCTGGGCTAAGCCCCCAAGGGTTCAGAAGGGAGGGTTaGGCCAGGTGCGTCTCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: SSCTSDCSYEAPGLSPQGFRREG*ARCVSA Trigger: TGCTGAGACGCACCTGGCGCAACCCTCCCTTCTGAA...CCCTTGGGGGCTTAGCCCAGGTGCTTCGTAACTGCAATCGGAAGTGCAGGAGCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000309739.6 |
||
| CDS-3UTR GCA 90 bp | CCTGGCTTGGGGTATGATGGTTCTCTCTCAGCGTCAGGTCCTCATGCCGGGCCTCCTCCACTTCTTGAGTaGGCTGTCCACTGTCTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: PGLGYDGSLSASGPHAGPPPLLE*AVHCLW Trigger: CCAGAGACAGTGGACAGCGCACTCAAGAAGTGGAGG...AGGCCCGGCATGAGGACCTGACGCTGAGAGAGAACCATCATACCCCAAGCCAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000309739.6 |
||
| CDS-3UTR CCA 90 bp | ACCAGCTCCTGCACTTCCGATTGCAGTTACGAAGCACCTGGGCTAAGCCCCCAACCCGTCTCTCCTTCATaGTTGCAGTGTCCGCGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: TSSCTSDCSYEAPGLSPQPVSPS*LQCPRD Trigger: GTCCCGCGGACACTGCAACCATGAAGGAGAGACGGG...TTGGGGGCTTAGCCCAGGTGCTTCGTAACTGCAATCGGAAGTGCAGGAGCTGGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000309739.6 |
||
| CDS-3UTR CCA 90 bp | CTGACCAGCTCCTGCACTTCCGATTGCAGTTACGAAGCACCTGGGCTAAGCCCCGGCGCCTGCTTCTGGTaGGACAGCTCCATCAGAGTA | + |
|
Preference number: 4 (lower is better) Translates to: LTSSCTSDCSYEAPGLSPGACFW*DSSIRV Trigger: TACTCTGATGGAGCTGTCCCACCAGAAGCAGGCGCC...GGGGCTTAGCCCAGGTGCTTCGTAACTGCAATCGGAAGTGCAGGAGCTGGTCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000309739.6 |
||
| CDS-3UTR CCA 90 bp | CAGTTACGAAGCACCTGGGCTAAGCCCCCAAGGGAGCTGCCGCTCCACTTCCCCTCCAAGCCCTCACCGTaGCCATCTGAAAAACTCATG | + |
|
Preference number: 4 (lower is better) Translates to: QLRSTWAKPPRELPLHFPSKPSP*PSEKLM Trigger: CATGAGTTTTTCAGATGGCCACGGTGAGGGCTTGGA...GGGGAAGTGGAGCGGCAGCTCCCTTGGGGGCTTAGCCCAGGTGCTTCGTAACTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000309739.6 |
||
| CDS-3UTR TCA 90 bp | GGCTCCTTCCTCGCCCCATTCCTGTCTCCTTCCAAGCCCTCACCGTGGCCATCTCTCACCGTGGCCATCTaGAAAACTCATGTCCAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: GSFLAPFLSPSKPSPWPSLTVAI*KTHVQC Trigger: ACACTGGACATGAGTTTTTCAGATGGCCACGGTGAG...AGATGGCCACGGTGAGGGCTTGGAAGGAGACAGGAATGGGGCGAGGAAGGAGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000309739.6 |
||
| CDS-3UTR TCA 90 bp | CCTGGCTTGGGGTATGATGGTTCTCTCTCAGCGTCAGGTCCTCATGCCGGGCCTGATGTCACCTCTCCATaGGGCATGGGCTATGCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: PGLGYDGSLSASGPHAGPDVTSP*GMGYAK Trigger: CTTTGCATAGCCCATGCCTCATGGAGAGGTGACATC...AGGCCCGGCATGAGGACCTGACGCTGAGAGAGAACCATCATACCCCAAGCCAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000309739.6 |
||
| CDS-3UTR GCA 90 bp | CCTGGCTTGGGGTATGATGGTTCTCTCTCAGCGTCAGGTCCTCATGCCGGGCCTCAGACACAGCATGGATaGCGTCCGAAAGATGCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: PGLGYDGSLSASGPHAGPQTQHG*RPKDAV Trigger: CACAGCATCTTTCGGACGGCATCCATGCTGTGTCTG...AGGCCCGGCATGAGGACCTGACGCTGAGAGAGAACCATCATACCCCAAGCCAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000309739.6 |
||
| CDS-3UTR GCA 90 bp | TCCTTCTCATTGGCTCTGACCAGCTCCTGCACTTCCGATTGCAGTTACGAAGCATCCTCCCTCTCCCCGTaGCTCTGCACCCCAAGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: SFSLALTSSCTSDCSYEASSLSP*LCTPRE Trigger: CTCCCTTGGGGTGCAGAGGCACGGGGAGAGGGAGGA...TGCTTCGTAACTGCAATCGGAAGTGCAGGAGCTGGTCAGAGCCAATGAGAAGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000309739.6 |
||
| CDS-3UTR CCA 90 bp | GCGTCAGGTCCTCATGCCGGGCCTGGCTCCTTCCTCGCCCCATTCCTGTCTCCTGCAAAACGCGGGTGCTaGGACAATAATCTAGGATTT | + |
|
Preference number: 4 (lower is better) Translates to: ASGPHAGPGSFLAPFLSPAKRGC*DNNLGF Trigger: AAATCCTAGATTATTGTCCCAGCACCCGCGTTTTGC...AGGAGACAGGAATGGGGCGAGGAAGGAGCCAGGCCCGGCATGAGGACCTGACGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000309739.6 |
||
| CDS-3UTR TCA 90 bp | CTTCTCATTGGCTCTGACCAGCTCCTGCACTTCCGATTGCAGTTACGAAGCACCACCCCTCCCATCCCCTaGCCTGCATGGAAACGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: LLIGSDQLLHFRLQLRSTTPPIP*PAWKRC Trigger: ACAGCGTTTCCATGCAGGTCAGGGGATGGGAGGGGT...GGTGCTTCGTAACTGCAATCGGAAGTGCAGGAGCTGGTCAGAGCCAATGAGAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000309739.6 |
||
| CDS-3UTR GCA 90 bp | GGCTCCTTCCTCGCCCCATTCCTGTCTCCTTCCAAGCCCTCACCGTGGCCATCTATTTCTGCACCCAGCTaGTTTGCTATTGCACAACCC | + |
|
Preference number: 4 (lower is better) Translates to: GSFLAPFLSPSKPSPWPSISAPS*FAIAQP Trigger: GGGTTGTGCAATAGCAAAGCAGCTGGGTGCAGAAAT...AGATGGCCACGGTGAGGGCTTGGAAGGAGACAGGAATGGGGCGAGGAAGGAGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000309739.6 |
||
| CDS-3UTR GCA 90 bp | TCCTGTCTCCTTCCAAGCCCTCACCGTGGCCATCTGAAAAACTCATGTCCAGTGCTCTCCCCGTGCCTCTaGACCCCAAGGGAGGAAGTA | + |
|
Preference number: 4 (lower is better) Translates to: SCLLPSPHRGHLKNSCPVLSPCL*TPREEV Trigger: TACTTCCTCCCTTGGGGTGCAGAGGCACGGGGAGAG...CACTGGACATGAGTTTTTCAGATGGCCACGGTGAGGGCTTGGAAGGAGACAGGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000309739.6 |
||
| CDS-3UTR GCA 90 bp | ACCAGCTCCTGCACTTCCGATTGCAGTTACGAAGCACCTGGGCTAAGCCCCCAATTCCCCACTCTCCGTTaGTGCCTCCTTAGAGGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: TSSCTSDCSYEAPGLSPQFPTLR*CLLRGE Trigger: TTCCCCTCTAAGGAGGCAGCAACGGAGAGTGGGGAA...TTGGGGGCTTAGCCCAGGTGCTTCGTAACTGCAATCGGAAGTGCAGGAGCTGGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000309739.6 |
||
| CDS-3UTR CCA 90 bp | TGTAATTTTCGAACACGGTGGGCACATAGGTCTGAGAGCAGACTCCAGGGACGCCCCGTCTCTCCTTCATaGTTGCAGTGTCCGCGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: CNFRTRWAHRSESRLQGRPVSPS*LQCPRD Trigger: GTCCCGCGGACACTGCAACCATGAAGGAGAGACGGG...GCGTCCCTGGAGTCTGCTCTCAGACCTATGTGCCCACCGTGTTCGAAAATTACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000551243.1 |
||
| CDS-3UTR CCA 90 bp | TGTAATTTTCGAACACGGTGGGCACATAGGTCTGAGAGCAGACTCCAGGGACGCAGGGACGCAGGAAGGTaGAGGGGATCTGATGGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: CNFRTRWAHRSESRLQGRRDAGR*RGSDGS Trigger: GGACCCATCAGATCCCCTCCACCTTCCTGCGTCCCT...GCGTCCCTGGAGTCTGCTCTCAGACCTATGTGCCCACCGTGTTCGAAAATTACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000551243.1 |
||
| 3UTR CAA 72 bp | CTTCTCATTGGCTCTGACCAGCTCCTGCACTTCCGATaGCAGTTACGAAGCACCTGGGCTAAGCCCCCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: LLIGSDQLLHFR*QLRSTWAKPPR Trigger: CCTTGGGGGCTTAGCCCAGGTGCTTCGTAACTGCAATCGGAAGTGCAGGAGCTGGTCAGAGCCAATGAGAAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000309739.6 |
||
| CDS-3UTR TCA 90 bp | TGTAATTTTCGAACACGGTGGGCACATAGGTCTGAGAGCAGACTCCAGGGACGCCTGTCTTGCAGCCAATaGGCAAAACGCGGGTGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: CNFRTRWAHRSESRLQGRLSCSQ*AKRGCW Trigger: CCAGCACCCGCGTTTTGCTCATTGGCTGCAAGACAG...GCGTCCCTGGAGTCTGCTCTCAGACCTATGTGCCCACCGTGTTCGAAAATTACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000551243.1 |
||
| CDS-3UTR GCA 90 bp | TGTAATTTTCGAACACGGTGGGCACATAGGTCTGAGAGCAGACTCCAGGGACGCTTCAGAAGGGAGGGTTaGGCCAGGTGCGTCTCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: CNFRTRWAHRSESRLQGRFRREG*ARCVSA Trigger: TGCTGAGACGCACCTGGCGCAACCCTCCCTTCTGAA...GCGTCCCTGGAGTCTGCTCTCAGACCTATGTGCCCACCGTGTTCGAAAATTACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000551243.1 |
||
| CDS-3UTR GCA 90 bp | TTCTGTCCTCCACTTCTTGAGTGCGCTGTCCACTGTCTCTGGACGGCTGATGTCCCTCCACTTCTTGAGTaGGCTGTCCACTGTCTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: FCPPLLECAVHCLWTADVPPLLE*AVHCLW Trigger: CCAGAGACAGTGGACAGCGCACTCAAGAAGTGGAGG...GACATCAGCCGTCCAGAGACAGTGGACAGCGCACTCAAGAAGTGGAGGACAGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000551243.1 |
||
| CDS-3UTR GCA 90 bp | TCCTTCTCATTGGCTCTGACCAGCTCCTGCACTTCCGATTGCAGTTACGAAGCAACCACCCCCACACTCTaGAAGAGAAGGGGGTCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: SFSLALTSSCTSDCSYEATTPTL*KRRGSG Trigger: CCCAGACCCCCTTCTCTTGCAGAGTGTGGGGGTGGT...TGCTTCGTAACTGCAATCGGAAGTGCAGGAGCTGGTCAGAGCCAATGAGAAGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000309739.6 |
||
| CDS-3UTR CCA 90 bp | TCCTTCTCATTGGCTCTGACCAGCTCCTGCACTTCCGATTGCAGTTACGAAGCACCTGCTCATAGGAGATaGGCGCCTGCTTCTGGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: SFSLALTSSCTSDCSYEAPAHRR*APASGG Trigger: CCCACCAGAAGCAGGCGCCCATCTCCTATGAGCAGG...TGCTTCGTAACTGCAATCGGAAGTGCAGGAGCTGGTCAGAGCCAATGAGAAGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000309739.6 |
||
| CDS-3UTR CCA 90 bp | GACCAGCTCCTGCACTTCCGATTGCAGTTACGAAGCACCTGGGCTAAGCCCCCATGTTCAGACACAGCATaGATGCCGTCCGAAAGATGC | + |
|
Preference number: 4 (lower is better) Translates to: DQLLHFRLQLRSTWAKPPCSDTA*MPSERC Trigger: GCATCTTTCGGACGGCATCCATGCTGTGTCTGAACA...TGGGGGCTTAGCCCAGGTGCTTCGTAACTGCAATCGGAAGTGCAGGAGCTGGTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000309739.6 |
||
| CDS-3UTR GCA 90 bp | TGTAGCAGAGTGGACGGACATTATCGTAGTAGGGAGATCCTGAGGTATCCCAGAGAGGGTTGCGCCAGGTaGGTCTCAGCACGCCAATCA | + |
|
Preference number: 4 (lower is better) Translates to: CSRVDGHYRSREILRYPREGCAR*VSARQS Trigger: TGATTGGCGTGCTGAGACGCACCTGGCGCAACCCTC...TCTGGGATACCTCAGGATCTCCCTACTACGATAATGTCCGTCCACTCTGCTACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000551243.1 |
||
| CDS-3UTR GCA 90 bp | ACCAGCTCCTGCACTTCCGATTGCAGTTACGAAGCACCTGGGCTAAGCCCCCAATCCTTCGCTAACACTTaGAACATCGCGGTCTTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: TSSCTSDCSYEAPGLSPQSFANT*NIAVFP Trigger: TGGGAAGACCGCGATGTTGCAAGTGTTAGCGAAGGA...TTGGGGGCTTAGCCCAGGTGCTTCGTAACTGCAATCGGAAGTGCAGGAGCTGGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000309739.6 |
||
| 3UTR CAA 72 bp | TCCATCAGAGTACTCAGGTCTGTTCGCAGGTCTGTCTaGCAGCCAATGAGCAAAACGCGGGTGCTGGGACAA | + |
|
Preference number: 4 (lower is better) Translates to: SIRVLRSVRRSV*QPMSKTRVLGQ Trigger: TTGTCCCAGCACCCGCGTTTTGCTCATTGGCTGCAAGACAGACCTGCGAACAGACCTGAGTACTCTGATGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000551243.1 |
||
| CDS-3UTR TCA 90 bp | CCCTCTGTTCCTCTGTCTCCAAACAGGCTGTGTAATTTTCGAACACGGTGGGCACTGTCCTCCACTTCTTaGGTGCGCTGTCCACTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: PSVPLSPNRLCNFRTRWALSSTS*VRCPLS Trigger: AGACAGTGGACAGCGCACTCAAGAAGTGGAGGACAG...TGCCCACCGTGTTCGAAAATTACACAGCCTGTTTGGAGACAGAGGAACAGAGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000551243.1 |
||
| CDS-3UTR GCA 90 bp | ACCAGCTCCTGCACTTCCGATTGCAGTTACGAAGCACCTGGGCTAAGCCCCCAACAGCTGCTTTGCTATTaGACAACCCTGCTCATAGGA | + |
|
Preference number: 4 (lower is better) Translates to: TSSCTSDCSYEAPGLSPQQLLCY*TTLLIG Trigger: TCCTATGAGCAGGGTTGTGCAATAGCAAAGCAGCTG...TTGGGGGCTTAGCCCAGGTGCTTCGTAACTGCAATCGGAAGTGCAGGAGCTGGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000309739.6 |
||
| CDS-3UTR GCA 90 bp | AGCTCCTGCACTTCCGATTGCAGTTACGAAGCACCTGGGCTAAGCCCCCAAGGGTTCCAGGTAGATTTCTaGACCCAGCTGCTTTGCTAT | + |
|
Preference number: 4 (lower is better) Translates to: SSCTSDCSYEAPGLSPQGFQVDF*TQLLCY Trigger: ATAGCAAAGCAGCTGGGTGCAGAAATCTACCTGGAA...CCCTTGGGGGCTTAGCCCAGGTGCTTCGTAACTGCAATCGGAAGTGCAGGAGCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000309739.6 |
||
| CDS-3UTR GCA 90 bp | ACCAGCTCCTGCACTTCCGATTGCAGTTACGAAGCACCTGGGCTAAGCCCCCAAATGCCGTCCGAAAGATaGTGTGGATGCTCTTTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: TSSCTSDCSYEAPGLSPQMPSER*CGCSFL Trigger: CAGAAAAGAGCATCCACAGCATCTTTCGGACGGCAT...TTGGGGGCTTAGCCCAGGTGCTTCGTAACTGCAATCGGAAGTGCAGGAGCTGGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000309739.6 |
||
| CDS-3UTR GCA 90 bp | TCCTTCTCATTGGCTCTGACCAGCTCCTGCACTTCCGATTGCAGTTACGAAGCATCCCATCCCCTGACCTaGATGGAAACGCTGTGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: SFSLALTSSCTSDCSYEASHPLT*METLCG Trigger: TCCACACAGCGTTTCCATGCAGGTCAGGGGATGGGA...TGCTTCGTAACTGCAATCGGAAGTGCAGGAGCTGGTCAGAGCCAATGAGAAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000309739.6 |
||
| CDS-3UTR CCA 90 bp | CCTTCCTCGCCCCATTCCTGTCTCCTTCCAAGCCCTCACCGTGGCCATCTGAAAAATTTTCGAACACGGTaGGCACATAGGTCTCTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: PSSPHSCLLPSPHRGHLKNFRTR*AHRSLD Trigger: ATCCAGAGACCTATGTGCCCACCGTGTTCGAAAATT...TTTCAGATGGCCACGGTGAGGGCTTGGAAGGAGACAGGAATGGGGCGAGGAAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000309739.6 |
||
| CDS-3UTR CCA 90 bp | TCCTTCTCATTGGCTCTGACCAGCTCCTGCACTTCCGATTGCAGTTACGAAGCAGCTCTTCTGGGGCAGTaGGCTAGGCTTGTTCAGACA | + |
|
Preference number: 4 (lower is better) Translates to: SFSLALTSSCTSDCSYEAALLGQ*ARLVQT Trigger: TGTCTGAACAAGCCTAGCCCACTGCCCCAGAAGAGC...TGCTTCGTAACTGCAATCGGAAGTGCAGGAGCTGGTCAGAGCCAATGAGAAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000309739.6 |
||
| CDS-3UTR CCA 90 bp | CTAGTGCCTGGCTTGGGGTATGATGGTTCTCTCTCAGCGTCAGGTCCTCATGCCCATGGAAACGCTGTGTaGAAGAGGCATGAAGCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: LVPGLGYDGSLSASGPHAHGNAV*KRHEAE Trigger: TTCAGCTTCATGCCTCTTCCACACAGCGTTTCCATG...GGCATGAGGACCTGACGCTGAGAGAGAACCATCATACCCCAAGCCAGGCACTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000309739.6 |
||
| CDS-3UTR TCA 90 bp | CCCTCTGTTCCTCTGTCTCCAAACAGGCTGTGTAATTTTCGAACACGGTGGGCAAGTGTCCGCGGGACTTaGACTTCGATTCAGAAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: PSVPLSPNRLCNFRTRWASVRGT*TSIQKG Trigger: TCCCTTCTGAATCGAAGTTCAAGTCCCGCGGACACT...TGCCCACCGTGTTCGAAAATTACACAGCCTGTTTGGAGACAGAGGAACAGAGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000551243.1 |
||
| CDS-3UTR TCA 90 bp | TCCTGTCTCCTTCCAAGCCCTCACCGTGGCCATCTGAAAAACTCATGTCCAGTGGTAGTAGGGAGATCCTaGGGTATCCCAGAGACTAAG | + |
|
Preference number: 4 (lower is better) Translates to: SCLLPSPHRGHLKNSCPVVVGRS*GIPETK Trigger: CTTAGTCTCTGGGATACCTCAGGATCTCCCTACTAC...CACTGGACATGAGTTTTTCAGATGGCCACGGTGAGGGCTTGGAAGGAGACAGGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000309739.6 |
||
| CDS-3UTR TCA 90 bp | CCTTCCTCGCCCCATTCCTGTCTCCTTCCAAGCCCTCACCGTGGCCATCTGAAACTGTCTCTGGACGGCTaGTGTCAAAACATAGTAATA | + |
|
Preference number: 4 (lower is better) Translates to: PSSPHSCLLPSPHRGHLKLSLDG*CQNIVI Trigger: TATTACTATGTTTTGACATCAGCCGTCCAGAGACAG...TTTCAGATGGCCACGGTGAGGGCTTGGAAGGAGACAGGAATGGGGCGAGGAAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000309739.6 |
||
| CDS-3UTR GCA 90 bp | GATTTCTGTCCTCCACTTCTTGAGTGCGCTGTCCACTGTCTCTGGACGGCTGATTCCTTCGCTAACACTTaGAACATCGCGGTCTTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: DFCPPLLECAVHCLWTADSFANT*NIAVFP Trigger: TGGGAAGACCGCGATGTTGCAAGTGTTAGCGAAGGA...ATCAGCCGTCCAGAGACAGTGGACAGCGCACTCAAGAAGTGGAGGACAGAAATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000551243.1 |
||
| CDS-3UTR CCA 90 bp | TCTGTCCTCCACTTCTTGAGTGCGCTGTCCACTGTCTCTGGACGGCTGATGTCAGTCGCTGTAGCAGAGTaGACGGACATTATCGTAGTA | + |
|
Preference number: 4 (lower is better) Translates to: SVLHFLSALSTVSGRLMSVAVAE*TDIIVV Trigger: TACTACGATAATGTCCGTCCACTCTGCTACAGCGAC...TGACATCAGCCGTCCAGAGACAGTGGACAGCGCACTCAAGAAGTGGAGGACAGA 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000551243.1 |
||
| CDS-3UTR TCA 90 bp | CAAAACATAGTAATACTGCATCCGAGTCGCTGTAGCAGAGTGGACGGACATTATGGGAGCCACGTCTCCTaGGCAGGTGGAAATCTACCC | + |
|
Preference number: 4 (lower is better) Translates to: QNIVILHPSRCSRVDGHYGSHVS*AGGNLP Trigger: GGGTAGATTTCCACCTGCTCAGGAGACGTGGCTCCC...ATAATGTCCGTCCACTCTGCTACAGCGACTCGGATGCAGTATTACTATGTTTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000551243.1 |
||
| CDS-3UTR CCA 90 bp | ATACTGCATCCGAGTCGCTGTAGCAGAGTGGACGGACATTATCGTAGTAGGGAGGCTGTCCACTGTCTCTaGACGGCTGATGTCAAAACA | + |
|
Preference number: 4 (lower is better) Translates to: ILHPSRCSRVDGHYRSREAVHCL*TADVKT Trigger: TGTTTTGACATCAGCCGTCCAGAGACAGTGGACAGC...CTCCCTACTACGATAATGTCCGTCCACTCTGCTACAGCGACTCGGATGCAGTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000551243.1 |
||
| 3UTR CAA 72 bp | AGGCATGGGCTATGCAAAGATGAGGTTTCCTTCTCATaGGCTCTGACCAGCTCCTGCACTTCCGATTGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: RHGLCKDEVSFS*ALTSSCTSDCS Trigger: ACTGCAATCGGAAGTGCAGGAGCTGGTCAGAGCCAATGAGAAGGAAACCTCATCTTTGCATAGCCCATGCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000309739.6 |
||
| CDS-3UTR TCA 90 bp | TGTAGCAGAGTGGACGGACATTATCGTAGTAGGGAGATCCTGAGGTATCCCAGAGTAGTAGGGAGATCCTaGGGTATCCCAGAGACTAAG | + |
|
Preference number: 4 (lower is better) Translates to: CSRVDGHYRSREILRYPRVVGRS*GIPETK Trigger: CTTAGTCTCTGGGATACCTCAGGATCTCCCTACTAC...TCTGGGATACCTCAGGATCTCCCTACTACGATAATGTCCGTCCACTCTGCTACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000551243.1 |
||
| CDS-3UTR CCA 90 bp | CCAAAGACAAGAGTCTATAAAACAAATGCCAGCTGTACTACCCTAAGGGCAGAACCTGCTCATAGGAGATaGGCGCCTGCTTCTGGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: PKTRVYKTNASCTTLRAEPAHRR*APASGG Trigger: CCCACCAGAAGCAGGCGCCCATCTCCTATGAGCAGG...TTCTGCCCTTAGGGTAGTACAGCTGGCATTTGTTTTATAGACTCTTGTCTTTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000309739.6 ENST00000550607.5 |
||
| CDS-3UTR CCA 90 bp | ATTCCAAAGACAAGAGTCTATAAAACAAATGCCAGCTGTACTACCCTAAGGGCACGGACAGGGCTCTTCTaGGGCAGTGGGCTAGGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: IPKTRVYKTNASCTTLRARTGLF*GSGLGL Trigger: CAAGCCTAGCCCACTGCCCCAGAAGAGCCCTGTCCG...TGCCCTTAGGGTAGTACAGCTGGCATTTGTTTTATAGACTCTTGTCTTTGGAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000309739.6 ENST00000550607.5 |
||
| CDS-3UTR CCA 90 bp | CCAAAGACAAGAGTCTATAAAACAAATGCCAGCTGTACTACCCTAAGGGCAGAAGGTGGAGCAGTCGTTTaGAGAGGCTTCGGACAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: PKTRVYKTNASCTTLRAEGGAVV*RGFGQG Trigger: GCCCTGTCCGAAGCCTCTCCAAACGACTGCTCCACC...TTCTGCCCTTAGGGTAGTACAGCTGGCATTTGTTTTATAGACTCTTGTCTTTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000309739.6 ENST00000550607.5 |
||
| CDS-3UTR CCA 90 bp | CCAAAGACAAGAGTCTATAAAACAAATGCCAGCTGTACTACCCTAAGGGCAGAAGAGCGACTGGGGAGGTaGAGCAGTCGTTTGGAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: PKTRVYKTNASCTTLRAEERLGR*SSRLER Trigger: CCTCTCCAAACGACTGCTCCACCTCCCCAGTCGCTC...TTCTGCCCTTAGGGTAGTACAGCTGGCATTTGTTTTATAGACTCTTGTCTTTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000309739.6 ENST00000550607.5 |
||
| CDS-3UTR CCA 90 bp | CAAAACATAGTAATACTGCATCCGAGTCGCTGTAGCAGAGTGGACGGACATTATCGTCTCCTGAGCAGGTaGAAATCTACCCCAAGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: QNIVILHPSRCSRVDGHYRLLSR*KSTPRR Trigger: CCGCCTTGGGGTAGATTTCCACCTGCTCAGGAGACG...ATAATGTCCGTCCACTCTGCTACAGCGACTCGGATGCAGTATTACTATGTTTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000551243.1 |
||
| CDS-3UTR TCA 90 bp | TCCTTCTCATTGGCTCTGACCAGCTCCTGCACTTCCGATTGCAGTTACGAAGCAAAGCATGTGAATGTATaGTGTCACCTCTCCATGAGG | + |
|
Preference number: 4 (lower is better) Translates to: SFSLALTSSCTSDCSYEAKHVNV*CHLSMR Trigger: CCTCATGGAGAGGTGACATCATACATTCACATGCTT...TGCTTCGTAACTGCAATCGGAAGTGCAGGAGCTGGTCAGAGCCAATGAGAAGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000309739.6 |
||
| CDS-3UTR CCA 90 bp | TGCAAAGATGAGGTTTCCTTCTCATTGGCTCTGACCAGCTCCTGCACTTCCGATGTCGCTGTAGCAGAGTaGACGGACATTATCGTAGTA | + |
|
Preference number: 4 (lower is better) Translates to: CKDEVSFSLALTSSCTSDVAVAE*TDIIVV Trigger: TACTACGATAATGTCCGTCCACTCTGCTACAGCGAC...ATCGGAAGTGCAGGAGCTGGTCAGAGCCAATGAGAAGGAAACCTCATCTTTGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000309739.6 |
||
| CDS-3UTR CCA 90 bp | ATACTGCATCCGAGTCGCTGTAGCAGAGTGGACGGACATTATCGTAGTAGGGAGGCAAAACGCGGGTGCTaGGACAATAATCTAGGATTT | + |
|
Preference number: 4 (lower is better) Translates to: ILHPSRCSRVDGHYRSREAKRGC*DNNLGF Trigger: AAATCCTAGATTATTGTCCCAGCACCCGCGTTTTGC...CTCCCTACTACGATAATGTCCGTCCACTCTGCTACAGCGACTCGGATGCAGTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000551243.1 |
||
| CDS-3UTR CCA 90 bp | CCAAAGACAAGAGTCTATAAAACAAATGCCAGCTGTACTACCCTAAGGGCAGAAGGCGCCTGCTTCTGGTaGGACAGCTCCATCAGAGTA | + |
|
Preference number: 4 (lower is better) Translates to: PKTRVYKTNASCTTLRAEGACFW*DSSIRV Trigger: TACTCTGATGGAGCTGTCCCACCAGAAGCAGGCGCC...TTCTGCCCTTAGGGTAGTACAGCTGGCATTTGTTTTATAGACTCTTGTCTTTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000309739.6 ENST00000550607.5 |
||
| CDS-3UTR CCA 90 bp | TGTAGCAGAGTGGACGGACATTATCGTAGTAGGGAGATCCTGAGGTATCCCAGAAATTTTCGAACACGGTaGGCACATAGGTCTGAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: CSRVDGHYRSREILRYPRNFRTR*AHRSES Trigger: GCTCTCAGACCTATGTGCCCACCGTGTTCGAAAATT...TCTGGGATACCTCAGGATCTCCCTACTACGATAATGTCCGTCCACTCTGCTACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000551243.1 |
||
| CDS-3UTR TCA 90 bp | ATTCCAAAGACAAGAGTCTATAAAACAAATGCCAGCTGTACTACCCTAAGGGCACTGTCTTGCAGCCAATaGGCAAAACGCGGGTGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: IPKTRVYKTNASCTTLRALSCSQ*AKRGCW Trigger: CCAGCACCCGCGTTTTGCTCATTGGCTGCAAGACAG...TGCCCTTAGGGTAGTACAGCTGGCATTTGTTTTATAGACTCTTGTCTTTGGAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000309739.6 ENST00000550607.5 |
||
| CDS-3UTR TCA 90 bp | CCAAAGACAAGAGTCTATAAAACAAATGCCAGCTGTACTACCCTAAGGGCAGAAAGTGTCCGCGGGACTTaGACTTCGATTCAGAAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: PKTRVYKTNASCTTLRAESVRGT*TSIQKG Trigger: TCCCTTCTGAATCGAAGTTCAAGTCCCGCGGACACT...TTCTGCCCTTAGGGTAGTACAGCTGGCATTTGTTTTATAGACTCTTGTCTTTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000309739.6 |
||
| CDS-3UTR TCA 90 bp | ATTCCAAAGACAAGAGTCTATAAAACAAATGCCAGCTGTACTACCCTAAGGGCACTGTCCTCCACTTCTTaGGTGCGCTGTCCACTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: IPKTRVYKTNASCTTLRALSSTS*VRCPLS Trigger: AGACAGTGGACAGCGCACTCAAGAAGTGGAGGACAG...TGCCCTTAGGGTAGTACAGCTGGCATTTGTTTTATAGACTCTTGTCTTTGGAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000309739.6 |
||
| CDS-3UTR GCA 90 bp | CCAAAGACAAGAGTCTATAAAACAAATGCCAGCTGTACTACCCTAAGGGCAGAACAGACACAGCATGGATaGCGTCCGAAAGATGCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: PKTRVYKTNASCTTLRAEQTQHG*RPKDAV Trigger: CACAGCATCTTTCGGACGGCATCCATGCTGTGTCTG...TTCTGCCCTTAGGGTAGTACAGCTGGCATTTGTTTTATAGACTCTTGTCTTTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000309739.6 ENST00000550607.5 |
||
| CDS-3UTR GCA 90 bp | CCAAAGACAAGAGTCTATAAAACAAATGCCAGCTGTACTACCCTAAGGGCAGAAGCTCTGACCAGCTCCTaGACTTCCGATTGCAGTTAC | + |
|
Preference number: 4 (lower is better) Translates to: PKTRVYKTNASCTTLRAEALTSS*TSDCSY Trigger: GTAACTGCAATCGGAAGTGCAGGAGCTGGTCAGAGC...TTCTGCCCTTAGGGTAGTACAGCTGGCATTTGTTTTATAGACTCTTGTCTTTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000309739.6 |
||
| CDS-3UTR CCA 90 bp | ATTCCAAAGACAAGAGTCTATAAAACAAATGCCAGCTGTACTACCCTAAGGGCAGCTCTTCTGGGGCAGTaGGCTAGGCTTGTTCAGACA | + |
|
Preference number: 4 (lower is better) Translates to: IPKTRVYKTNASCTTLRAALLGQ*ARLVQT Trigger: TGTCTGAACAAGCCTAGCCCACTGCCCCAGAAGAGC...TGCCCTTAGGGTAGTACAGCTGGCATTTGTTTTATAGACTCTTGTCTTTGGAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000309739.6 ENST00000550607.5 |
||
| CDS-3UTR CCA 90 bp | CCAAAGACAAGAGTCTATAAAACAAATGCCAGCTGTACTACCCTAAGGGCAGAAGCTGTCCACTGTCTCTaGACGGCTGATGTCAAAACA | + |
|
Preference number: 4 (lower is better) Translates to: PKTRVYKTNASCTTLRAEAVHCL*TADVKT Trigger: TGTTTTGACATCAGCCGTCCAGAGACAGTGGACAGC...TTCTGCCCTTAGGGTAGTACAGCTGGCATTTGTTTTATAGACTCTTGTCTTTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000309739.6 |
||
| CDS-3UTR TCA 90 bp | CCAAAGACAAGAGTCTATAAAACAAATGCCAGCTGTACTACCCTAAGGGCAGAAGCAGAAAAAGTCTGGTaGCCCCCACTTCACATAATG | + |
|
Preference number: 4 (lower is better) Translates to: PKTRVYKTNASCTTLRAEAEKVW*PPLHIM Trigger: CATTATGTGAAGTGGGGGTCACCAGACTTTTTCTGC...TTCTGCCCTTAGGGTAGTACAGCTGGCATTTGTTTTATAGACTCTTGTCTTTGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000550607.5 |
||
| CDS-3UTR GCA 90 bp | CCAAAGACAAGAGTCTATAAAACAAATGCCAGCTGTACTACCCTAAGGGCAGAACAGCTGCTTTGCTATTaGACAACCCTGCTCATAGGA | + |
|
Preference number: 4 (lower is better) Translates to: PKTRVYKTNASCTTLRAEQLLCY*TTLLIG Trigger: TCCTATGAGCAGGGTTGTGCAATAGCAAAGCAGCTG...TTCTGCCCTTAGGGTAGTACAGCTGGCATTTGTTTTATAGACTCTTGTCTTTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000309739.6 ENST00000550607.5 |
||
| CDS-3UTR GCA 90 bp | CCAAAGACAAGAGTCTATAAAACAAATGCCAGCTGTACTACCCTAAGGGCAGAAATGCCGTCCGAAAGATaGTGTGGATGCTCTTTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: PKTRVYKTNASCTTLRAEMPSER*CGCSFL Trigger: CAGAAAAGAGCATCCACAGCATCTTTCGGACGGCAT...TTCTGCCCTTAGGGTAGTACAGCTGGCATTTGTTTTATAGACTCTTGTCTTTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000309739.6 ENST00000550607.5 |
||
| CDS-3UTR CCA 90 bp | ATTCCAAAGACAAGAGTCTATAAAACAAATGCCAGCTGTACTACCCTAAGGGCATGTTCAGACACAGCATaGATGCCGTCCGAAAGATGC | + |
|
Preference number: 4 (lower is better) Translates to: IPKTRVYKTNASCTTLRACSDTA*MPSERC Trigger: GCATCTTTCGGACGGCATCCATGCTGTGTCTGAACA...TGCCCTTAGGGTAGTACAGCTGGCATTTGTTTTATAGACTCTTGTCTTTGGAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000309739.6 ENST00000550607.5 |
||
| CDS-3UTR GCA 90 bp | ATTCCAAAGACAAGAGTCTATAAAACAAATGCCAGCTGTACTACCCTAAGGGCAATTTCTGCACCCAGCTaGTTTGCTATTGCACAACCC | + |
|
Preference number: 4 (lower is better) Translates to: IPKTRVYKTNASCTTLRAISAPS*FAIAQP Trigger: GGGTTGTGCAATAGCAAAGCAGCTGGGTGCAGAAAT...TGCCCTTAGGGTAGTACAGCTGGCATTTGTTTTATAGACTCTTGTCTTTGGAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000309739.6 ENST00000550607.5 |
||
| CDS-3UTR CCA 90 bp | CCAAAGACAAGAGTCTATAAAACAAATGCCAGCTGTACTACCCTAAGGGCAGAAGCAAAACGCGGGTGCTaGGACAATAATCTAGGATTT | + |
|
Preference number: 4 (lower is better) Translates to: PKTRVYKTNASCTTLRAEAKRGC*DNNLGF Trigger: AAATCCTAGATTATTGTCCCAGCACCCGCGTTTTGC...TTCTGCCCTTAGGGTAGTACAGCTGGCATTTGTTTTATAGACTCTTGTCTTTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000309739.6 ENST00000550607.5 |
||
| CDS-3UTR GCA 90 bp | ATTCCAAAGACAAGAGTCTATAAAACAAATGCCAGCTGTACTACCCTAAGGGCATTCCAGGTAGATTTCTaGACCCAGCTGCTTTGCTAT | + |
|
Preference number: 4 (lower is better) Translates to: IPKTRVYKTNASCTTLRAFQVDF*TQLLCY Trigger: ATAGCAAAGCAGCTGGGTGCAGAAATCTACCTGGAA...TGCCCTTAGGGTAGTACAGCTGGCATTTGTTTTATAGACTCTTGTCTTTGGAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000309739.6 ENST00000550607.5 |
||
| CDS CCA 90 bp | TGCACGTCCCCGACCAGAACGAGCTTACATCTGGCCACGACTGGCTaGGGGGCCCGTCTCTCCTTCATGGTTGCAGTGTCCGCGGGACTT | + |
|
Preference number: 5 (lower is better) Translates to: CTSPTRTSLHLATTG*GARLSFMVAVSAGL Trigger: AAGTCCCGCGGACACTGCAACCATGAAGGAGAGACGGGCCCCCCAGCCAGTCGTGGCCAGATGTAAGCTCGTTCTGGTCGGGGACGTGCA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000309739.6 ENST00000551243.1 ENST00000649147.1 |
||
| CDS-3UTR CAA 90 bp | GGCTCCTTCCTCGCCCCATTCCTGTCTCCTTCCAAGCCCTCACCGTGGCCATCTATTCAGAAGGGAGGGTaGCGCCAGGTGCGTCTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: GSFLAPFLSPSKPSPWPSIQKGG*RQVRLS Trigger: GCTGAGACGCACCTGGCGCAACCCTCCCTTCTGAAT...AGATGGCCACGGTGAGGGCTTGGAAGGAGACAGGAATGGGGCGAGGAAGGAGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000309739.6 |
||
| CDS CCA 90 bp | GGGAGGTGGAGCAGTCGTTTGGAGAGGCTTCGGACAGGGCTCTTCTaGGGCAGTGGGCTAGGCTTGTTCAGACACAGCATGGATGCCGTC | + |
|
Preference number: 5 (lower is better) Translates to: GRWSSRLERLRTGLF*GSGLGLFRHSMDAV Trigger: GACGGCATCCATGCTGTGTCTGAACAAGCCTAGCCCACTGCCCCAGAAGAGCCCTGTCCGAAGCCTCTCCAAACGACTGCTCCACCTCCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000309739.6 ENST00000548445.1 ENST00000550607.5 ENST00000649147.1 |
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| CDS-3UTR CAA 90 bp | GCGTCAGGTCCTCATGCCGGGCCTGGCTCCTTCCTCGCCCCATTCCTGTCTCCTCCAGCTGCTTTGCTATaGCACAACCCTGCTCATAGG | + |
|
Preference number: 5 (lower is better) Translates to: ASGPHAGPGSFLAPFLSPPAALL*HNPAHR Trigger: CCTATGAGCAGGGTTGTGCAATAGCAAAGCAGCTGG...AGGAGACAGGAATGGGGCGAGGAAGGAGCCAGGCCCGGCATGAGGACCTGACGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000309739.6 |
||
| CDS-3UTR CAA 90 bp | CAGTTACGAAGCACCTGGGCTAAGCCCCCAAGGGAGCTGCCGCTCCACTTCCCCGGCAGTGGGCTAGGCTaGTTCAGACACAGCATGGAT | + |
|
Preference number: 5 (lower is better) Translates to: QLRSTWAKPPRELPLHFPGSGLG*FRHSMD Trigger: ATCCATGCTGTGTCTGAACAAGCCTAGCCCACTGCC...GGGGAAGTGGAGCGGCAGCTCCCTTGGGGGCTTAGCCCAGGTGCTTCGTAACTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000309739.6 |
||
| CDS-3UTR CAA 90 bp | CCTGGCTTGGGGTATGATGGTTCTCTCTCAGCGTCAGGTCCTCATGCCGGGCCTAGGTGGAGCAGTCGTTaGGAGAGGCTTCGGACAGGG | + |
|
Preference number: 5 (lower is better) Translates to: PGLGYDGSLSASGPHAGPRWSSR*ERLRTG Trigger: CCCTGTCCGAAGCCTCTCCAAACGACTGCTCCACCT...AGGCCCGGCATGAGGACCTGACGCTGAGAGAGAACCATCATACCCCAAGCCAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000309739.6 |
||
| CDS GCA 90 bp | GTTGCAGTGTCCGCGGGACTTGAACTTCGATTCAGAAGGGAGGGTTaGGCCAGGTGCGTCTCAGCACGCCAATCAAGCCAGATTCCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: VAVSAGLELRFRREG*ARCVSARQSSQIPC Trigger: GCAGGGAATCTGGCTTGATTGGCGTGCTGAGACGCACCTGGCGCAACCCTCCCTTCTGAATCGAAGTTCAAGTCCCGCGGACACTGCAAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000309739.6 ENST00000649147.1 |
||
| CDS GCA 90 bp | CTCAGTCACCAGAGAGGGCACAAGGGCAATTCTCCTCCCACTCTCTaGCAACCATATAGGCATGGATCTGCCCCCTCACCCCAAAGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: LSHQRGHKGNSPPTL*QPYRHGSAPSPQRA Trigger: GGCCCTTTGGGGTGAGGGGGCAGATCCATGCCTATATGGTTGGCAGAGAGTGGGAGGAGAATTGCCCTTGTGCCCTCTCTGGTGACTGAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000649147.1 |
||
| CDS-3UTR CAA 90 bp | AGCTCCTGCACTTCCGATTGCAGTTACGAAGCACCTGGGCTAAGCCCCCAAGGGGTCTCTCCTTCATGGTaGCAGTGTCCGCGGGACTTG | + |
|
Preference number: 5 (lower is better) Translates to: SSCTSDCSYEAPGLSPQGVSPSW*QCPRDL Trigger: CAAGTCCCGCGGACACTGCAACCATGAAGGAGAGAC...CCCTTGGGGGCTTAGCCCAGGTGCTTCGTAACTGCAATCGGAAGTGCAGGAGCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000309739.6 |
||
| CDS-3UTR CAA 90 bp | CTAGTGCCTGGCTTGGGGTATGATGGTTCTCTCTCAGCGTCAGGTCCTCATGCCTCTGGGGCTTCTCCCTaGGACCCTGGGGACTTAGGT | + |
|
Preference number: 5 (lower is better) Translates to: LVPGLGYDGSLSASGPHASGASP*DPGDLG Trigger: ACCTAAGTCCCCAGGGTCCAAGGGAGAAGCCCCAGA...GGCATGAGGACCTGACGCTGAGAGAGAACCATCATACCCCAAGCCAGGCACTAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000309739.6 |
||
| CDS GCA 90 bp | GCCTCTGTGCGTCACTCCCCAGGGCCACTCCAGAGGGGACCCAGCTaGCAGTCTCCAAACACCACCCTCTGCAGATTATTCGATTATCTT | + |
|
Preference number: 5 (lower is better) Translates to: ASVRHSPGPLQRGPS*QSPNTTLCRLFDYL Trigger: AAGATAATCGAATAATCTGCAGAGGGTGGTGTTTGGAGACTGGCAGCTGGGTCCCCTCTGGAGTGGCCCTGGGGAGTGACGCACAGAGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000548445.1 |
||
| CDS CCA 90 bp | GAGCAGTCGTTTGGAGAGGCTTCGGACAGGGCTCTTCTGGGGCAGTaGGCTAGGCTTGTTCAGACACAGCATGGATGCCGTCCGAAAGAT | + |
|
Preference number: 5 (lower is better) Translates to: EQSFGEASDRALLGQ*ARLVQTQHGCRPKD Trigger: ATCTTTCGGACGGCATCCATGCTGTGTCTGAACAAGCCTAGCCCACTGCCCCAGAAGAGCCCTGTCCGAAGCCTCTCCAAACGACTGCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000309739.6 ENST00000548445.1 ENST00000550607.5 ENST00000649147.1 |
||
| CDS-3UTR CAA 90 bp | CTGACCAGCTCCTGCACTTCCGATTGCAGTTACGAAGCACCTGGGCTAAGCCCCCAGTGTCCGCGGGACTaGAACTTCGATTCAGAAGGG | + |
|
Preference number: 5 (lower is better) Translates to: LTSSCTSDCSYEAPGLSPQCPRD*NFDSEG Trigger: CCCTTCTGAATCGAAGTTCAAGTCCCGCGGACACTG...GGGGCTTAGCCCAGGTGCTTCGTAACTGCAATCGGAAGTGCAGGAGCTGGTCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000309739.6 |
||
| CDS-3UTR CAA 90 bp | CCTTCCTCGCCCCATTCCTGTCTCCTTCCAAGCCCTCACCGTGGCCATCTGAAACTGCACCCAGCTGCTTaGCTATTGCACAACCCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: PSSPHSCLLPSPHRGHLKLHPAA*LLHNPA Trigger: AGCAGGGTTGTGCAATAGCAAAGCAGCTGGGTGCAG...TTTCAGATGGCCACGGTGAGGGCTTGGAAGGAGACAGGAATGGGGCGAGGAAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000309739.6 |
||
| CDS CCA 90 bp | TCCTTCTTGAAGGTAGAAGAGATGAGTTCAGAGCGACTGGGGAGGTaGAGCAGTCGTTTGGAGAGGCTTCGGACAGGGCTCTTCTGGGGC | + |
|
Preference number: 5 (lower is better) Translates to: SFLKVEEMSSERLGR*SSRLERLRTGLFWG Trigger: GCCCCAGAAGAGCCCTGTCCGAAGCCTCTCCAAACGACTGCTCCACCTCCCCAGTCGCTCTGAACTCATCTCTTCTACCTTCAAGAAGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000309739.6 ENST00000548445.1 ENST00000550607.5 ENST00000649147.1 |
||
| CDS-3UTR CAA 90 bp | CGCTGTAGCAGAGTGGACGGACATTATCGTAGTAGGGAGATCCTGAGGTATCCCATTCAGAAGGGAGGGTaGCGCCAGGTGCGTCTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: RCSRVDGHYRSREILRYPIQKGG*RQVRLS Trigger: GCTGAGACGCACCTGGCGCAACCCTCCCTTCTGAAT...GGGATACCTCAGGATCTCCCTACTACGATAATGTCCGTCCACTCTGCTACAGCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000551243.1 |
||
| CDS-3UTR CAA 90 bp | ACCAGCTCCTGCACTTCCGATTGCAGTTACGAAGCACCTGGGCTAAGCCCCCAAGAGGTTTCCTTCTCATaGGCTCTGACCAGCTCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: TSSCTSDCSYEAPGLSPQEVSFS*ALTSSC Trigger: GCAGGAGCTGGTCAGAGCCAATGAGAAGGAAACCTC...TTGGGGGCTTAGCCCAGGTGCTTCGTAACTGCAATCGGAAGTGCAGGAGCTGGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000309739.6 |
||
| CDS-3UTR CAA 90 bp | TCCTCGCCCCATTCCTGTCTCCTTCCAAGCCCTCACCGTGGCCATCTGAAAAACGTCCAGTGTCCTAAATaGTCTCATCCTCCCTCTCCC | + |
|
Preference number: 5 (lower is better) Translates to: SSPHSCLLPSPHRGHLKNVQCPK*SHPPSP Trigger: GGGAGAGGGAGGATGAGACAATTTAGGACACTGGAC...GTTTTTCAGATGGCCACGGTGAGGGCTTGGAAGGAGACAGGAATGGGGCGAGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000309739.6 |
||
| CDS GCA 90 bp | GGCTTGCCCATTCTCAGTGGGACTGGGATCAGGGTCTATAGAAGCTaGCTCCAAAAGGTCCCATGCCTGACCCTCATACCGTATCACCTA | + |
|
Preference number: 5 (lower is better) Translates to: GLPILSGTGIRVYRS*LQKVPCLTLIPYHL Trigger: TAGGTGATACGGTATGAGGGTCAGGCATGGGACCTTTTGGAGGCAGCTTCTATAGACCCTGATCCCAGTCCCACTGAGAATGGGCAAGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000649147.1 |
||
| CDS GCA 90 bp | ACTCATCACCAGCCCAGTCCTCCCTCTGAGTCACAGCATCACCGTTaGACTAATTACATCATTTTCCTGCCCATGAGGCCTTTGGGGCCC | + |
|
Preference number: 5 (lower is better) Translates to: THHQPSPPSESQHHR*TNYIIFLPMRPLGP Trigger: GGGCCCCAAAGGCCTCATGGGCAGGAAAATGATGTAATTAGTGCAACGGTGATGCTGTGACTCAGAGGGAGGACTGGGCTGGTGATGAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000649147.1 |
||
| CDS CCA 90 bp | GTAGGGAGATCCTGGTGTAGGCCAGAAAGAGCTGATGGTGAGCCATaGTGTTTTCCTTCCCCAATAGGCCTAAGCCCTAAAGCCCTGGGA | + |
|
Preference number: 5 (lower is better) Translates to: VGRSWCRPERADGEP*CFPSPIGLSPKALG Trigger: TCCCAGGGCTTTAGGGCTTAGGCCTATTGGGGAAGGAAAACACCATGGCTCACCATCAGCTCTTTCTGGCCTACACCAGGATCTCCCTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000553260.1 |
||
| CDS-3UTR CAA 90 bp | TCCTGTCTCCTTCCAAGCCCTCACCGTGGCCATCTGAAAAACTCATGTCCAGTGTCTGTCCTCCACTTCTaGAGTGCGCTGTCCACTGTC | + |
|
Preference number: 5 (lower is better) Translates to: SCLLPSPHRGHLKNSCPVSVLHF*SALSTV Trigger: GACAGTGGACAGCGCACTCAAGAAGTGGAGGACAGA...CACTGGACATGAGTTTTTCAGATGGCCACGGTGAGGGCTTGGAAGGAGACAGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000309739.6 |
||
| CDS-3UTR CAA 90 bp | GCTCCTTCCTCGCCCCATTCCTGTCTCCTTCCAAGCCCTCACCGTGGCCATCTGTTGGCCTTTTCCTTCTaGAAGGTAGAAGAGATGAGT | + |
|
Preference number: 5 (lower is better) Translates to: APSSPHSCLLPSPHRGHLLAFSF*KVEEMS Trigger: ACTCATCTCTTCTACCTTCAAGAAGGAAAAGGCCAA...CAGATGGCCACGGTGAGGGCTTGGAAGGAGACAGGAATGGGGCGAGGAAGGAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000309739.6 |
||
| CDS-3UTR CAA 90 bp | CTAGTGCCTGGCTTGGGGTATGATGGTTCTCTCTCAGCGTCAGGTCCTCATGCCAATCTAGTGCCTGGCTaGGGGTATGATGGTTCTCTC | + |
|
Preference number: 5 (lower is better) Translates to: LVPGLGYDGSLSASGPHANLVPG*GYDGSL Trigger: GAGAGAACCATCATACCCCAAGCCAGGCACTAGATT...GGCATGAGGACCTGACGCTGAGAGAGAACCATCATACCCCAAGCCAGGCACTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000309739.6 |
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| CDS TCA 90 bp | AAGGTCCCATGCCTGACCCTCATACCGTATCACCTAAAGGTTCTCTaGCTCTCCGTCCTCTGCTTCCTGAGTCTTCAATACCACCCTCCC | + |
|
Preference number: 5 (lower is better) Translates to: KVPCLTLIPYHLKVL*LSVLCFLSLQYHPP Trigger: GGGAGGGTGGTATTGAAGACTCAGGAAGCAGAGGACGGAGAGTCAGAGAACCTTTAGGTGATACGGTATGAGGGTCAGGCATGGGACCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000649147.1 |
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| CDS CCA 90 bp | AAGGAAGGAGAGTTAGTGGCAGACAGATACCAGGAGAAGCTTGGCTaGCAACGTCACACACATCACCTCACTCATCACCAGCCCAGTCCT | + |
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Preference number: 5 (lower is better) Translates to: KEGELVADRYQEKLG*QRHTHHLTHHQPSP Trigger: AGGACTGGGCTGGTGATGAGTGAGGTGATGTGTGTGACGTTGCCAGCCAAGCTTCTCCTGGTATCTGTCTGCCACTAACTCTCCTTCCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000649147.1 |
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| CDS-3UTR CAA 90 bp | CCATTCCTGTCTCCTTCCAAGCCCTCACCGTGGCCATCTGAAAAACTCATGTCCGTTCGCAGGTCTGTCTaGCAGCCAATGAGCAAAACG | + |
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Preference number: 5 (lower is better) Translates to: PFLSPSKPSPWPSEKLMSVRRSV*QPMSKT Trigger: CGTTTTGCTCATTGGCTGCAAGACAGACCTGCGAAC...GGACATGAGTTTTTCAGATGGCCACGGTGAGGGCTTGGAAGGAGACAGGAATGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000309739.6 |
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| CDS TCA 90 bp | GCATGGATGCCGTCCGAAAGATGCTGTGGATGCTCTTTTCTGAGGTaGAAGCTGAGCCTTCCAGGTAGATTTCTGCACCCAGCTGCTTTG | + |
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Preference number: 5 (lower is better) Translates to: AWMPSERCCGCSFLR*KLSLPGRFLHPAAL Trigger: CAAAGCAGCTGGGTGCAGAAATCTACCTGGAAGGCTCAGCTTTCACCTCAGAAAAGAGCATCCACAGCATCTTTCGGACGGCATCCATGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000309739.6 ENST00000548445.1 ENST00000550607.5 ENST00000553260.1 ENST00000649147.1 |
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| CDS CCA 90 bp | GTCGCTGTAGCAGAGTGGACGGACATTATCGTAGTAGGGAGATCCTaGTGTAGGCCAGAAAGAGCTGATGGTGAGCCATGGTGTTTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: VAVAEWTDIIVVGRS*CRPERADGEPWCFP Trigger: AGGAAAACACCATGGCTCACCATCAGCTCTTTCTGGCCTACACCAGGATCTCCCTACTACGATAATGTCCGTCCACTCTGCTACAGCGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000553260.1 |
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| CDS-3UTR CAA 90 bp | TGTAGCAGAGTGGACGGACATTATCGTAGTAGGGAGATCCTGAGGTATCCCAGATCTGTCCTCCACTTCTaGAGTGCGCTGTCCACTGTC | + |
|
Preference number: 5 (lower is better) Translates to: CSRVDGHYRSREILRYPRSVLHF*SALSTV Trigger: GACAGTGGACAGCGCACTCAAGAAGTGGAGGACAGA...TCTGGGATACCTCAGGATCTCCCTACTACGATAATGTCCGTCCACTCTGCTACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000551243.1 |
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| CDS-3UTR CAA 90 bp | ATACTGCATCCGAGTCGCTGTAGCAGAGTGGACGGACATTATCGTAGTAGGGAGGTTCGCAGGTCTGTCTaGCAGCCAATGAGCAAAACG | + |
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Preference number: 5 (lower is better) Translates to: ILHPSRCSRVDGHYRSREVRRSV*QPMSKT Trigger: CGTTTTGCTCATTGGCTGCAAGACAGACCTGCGAAC...CTCCCTACTACGATAATGTCCGTCCACTCTGCTACAGCGACTCGGATGCAGTAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000551243.1 |
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| CDS GCA 90 bp | GCTAGATACACAAGGTTTCCTAGGACTCCTCAGCATTGGTGGATCTaGCCAGACCTAAGCATTTCATACCAGCAGCTCAGCTCAGACCTG | + |
|
Preference number: 5 (lower is better) Translates to: ARYTRFPRTPQHWWI*PDLSISYQQLSSDL Trigger: CAGGTCTGAGCTGAGCTGCTGGTATGAAATGCTTAGGTCTGGGCAGATCCACCAATGCTGAGGAGTCCTAGGAAACCTTGTGTATCTAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000649147.1 |
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| CDS-3UTR CAA 90 bp | AACATAGTAATACTGCATCCGAGTCGCTGTAGCAGAGTGGACGGACATTATCGTCAGTGTCCGCGGGACTaGAACTTCGATTCAGAAGGG | + |
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Preference number: 5 (lower is better) Translates to: NIVILHPSRCSRVDGHYRQCPRD*NFDSEG Trigger: CCCTTCTGAATCGAAGTTCAAGTCCCGCGGACACTG...ACGATAATGTCCGTCCACTCTGCTACAGCGACTCGGATGCAGTATTACTATGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000551243.1 |
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| CDS-3UTR CAA 90 bp | CCAAAGACAAGAGTCTATAAAACAAATGCCAGCTGTACTACCCTAAGGGCAGAAAGGTGGAGCAGTCGTTaGGAGAGGCTTCGGACAGGG | + |
|
Preference number: 5 (lower is better) Translates to: PKTRVYKTNASCTTLRAERWSSR*ERLRTG Trigger: CCCTGTCCGAAGCCTCTCCAAACGACTGCTCCACCT...TTCTGCCCTTAGGGTAGTACAGCTGGCATTTGTTTTATAGACTCTTGTCTTTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000309739.6 ENST00000550607.5 |
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| CDS-3UTR CAA 90 bp | ACCAGCTCCTGCACTTCCGATTGCAGTTACGAAGCACCTGGGCTAAGCCCCCAAATAATGGAACAGCTTTaGGCCTTTTCCTTCTTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: TSSCTSDCSYEAPGLSPQIMEQL*AFSFLK Trigger: CTTCAAGAAGGAAAAGGCCAAAAGCTGTTCCATTAT...TTGGGGGCTTAGCCCAGGTGCTTCGTAACTGCAATCGGAAGTGCAGGAGCTGGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000309739.6 |
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| CDS CCA 90 bp | TACTATGCTAGATACACAAGGTTTCCTAGGACTCCTCAGCATTGGTaGATCTGCCCAGACCTAAGCATTTCATACCAGCAGCTCAGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: YYARYTRFPRTPQHW*ICPDLSISYQQLSS Trigger: TGAGCTGAGCTGCTGGTATGAAATGCTTAGGTCTGGGCAGATCCACCAATGCTGAGGAGTCCTAGGAAACCTTGTGTATCTAGCATAGTA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000649147.1 |
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| CDS CCA 90 bp | CTATACTATGCTAGATACACAAGGTTTCCTAGGACTCCTCAGCATTaGTGGATCTGCCCAGACCTAAGCATTTCATACCAGCAGCTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: LYYARYTRFPRTPQH*WICPDLSISYQQLS Trigger: GCTGAGCTGCTGGTATGAAATGCTTAGGTCTGGGCAGATCCACCAATGCTGAGGAGTCCTAGGAAACCTTGTGTATCTAGCATAGTATAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000649147.1 |
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| CDS-3UTR CAA 90 bp | CCAAAGACAAGAGTCTATAAAACAAATGCCAGCTGTACTACCCTAAGGGCAGAAGTTCGCAGGTCTGTCTaGCAGCCAATGAGCAAAACG | + |
|
Preference number: 5 (lower is better) Translates to: PKTRVYKTNASCTTLRAEVRRSV*QPMSKT Trigger: CGTTTTGCTCATTGGCTGCAAGACAGACCTGCGAAC...TTCTGCCCTTAGGGTAGTACAGCTGGCATTTGTTTTATAGACTCTTGTCTTTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000309739.6 ENST00000550607.5 |
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| CDS-3UTR CAA 90 bp | ATTCCAAAGACAAGAGTCTATAAAACAAATGCCAGCTGTACTACCCTAAGGGCACTGCACCCAGCTGCTTaGCTATTGCACAACCCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: IPKTRVYKTNASCTTLRALHPAA*LLHNPA Trigger: AGCAGGGTTGTGCAATAGCAAAGCAGCTGGGTGCAG...TGCCCTTAGGGTAGTACAGCTGGCATTTGTTTTATAGACTCTTGTCTTTGGAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000309739.6 ENST00000550607.5 |
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| CDS-3UTR CAA 90 bp | ATTCCAAAGACAAGAGTCTATAAAACAAATGCCAGCTGTACTACCCTAAGGGCAGGCAGTGGGCTAGGCTaGTTCAGACACAGCATGGAT | + |
|
Preference number: 5 (lower is better) Translates to: IPKTRVYKTNASCTTLRAGSGLG*FRHSMD Trigger: ATCCATGCTGTGTCTGAACAAGCCTAGCCCACTGCC...TGCCCTTAGGGTAGTACAGCTGGCATTTGTTTTATAGACTCTTGTCTTTGGAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000309739.6 ENST00000550607.5 |
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| CDS-3UTR CAA 90 bp | ATTCCAAAGACAAGAGTCTATAAAACAAATGCCAGCTGTACTACCCTAAGGGCACTCCTGCACTTCCGATaGCAGTTACGAAGCACCTGG | + |
|
Preference number: 5 (lower is better) Translates to: IPKTRVYKTNASCTTLRALLHFR*QLRSTW Trigger: CCAGGTGCTTCGTAACTGCAATCGGAAGTGCAGGAG...TGCCCTTAGGGTAGTACAGCTGGCATTTGTTTTATAGACTCTTGTCTTTGGAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000309739.6 |
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| CDS-3UTR CAA 90 bp | ATTCCAAAGACAAGAGTCTATAAAACAAATGCCAGCTGTACTACCCTAAGGGCACCAGCTGCTTTGCTATaGCACAACCCTGCTCATAGG | + |
|
Preference number: 5 (lower is better) Translates to: IPKTRVYKTNASCTTLRAPAALL*HNPAHR Trigger: CCTATGAGCAGGGTTGTGCAATAGCAAAGCAGCTGG...TGCCCTTAGGGTAGTACAGCTGGCATTTGTTTTATAGACTCTTGTCTTTGGAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000309739.6 ENST00000550607.5 |
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| CDS-3UTR CAA 90 bp | CCAAAGACAAGAGTCTATAAAACAAATGCCAGCTGTACTACCCTAAGGGCAGAATTGGCCTTTTCCTTCTaGAAGGTAGAAGAGATGAGT | + |
|
Preference number: 5 (lower is better) Translates to: PKTRVYKTNASCTTLRAELAFSF*KVEEMS Trigger: ACTCATCTCTTCTACCTTCAAGAAGGAAAAGGCCAA...TTCTGCCCTTAGGGTAGTACAGCTGGCATTTGTTTTATAGACTCTTGTCTTTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000309739.6 ENST00000550607.5 |
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| CDS-3UTR CAA 90 bp | ATTCCAAAGACAAGAGTCTATAAAACAAATGCCAGCTGTACTACCCTAAGGGCAATAATGGAACAGCTTTaGGCCTTTTCCTTCTTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: IPKTRVYKTNASCTTLRAIMEQL*AFSFLK Trigger: CTTCAAGAAGGAAAAGGCCAAAAGCTGTTCCATTAT...TGCCCTTAGGGTAGTACAGCTGGCATTTGTTTTATAGACTCTTGTCTTTGGAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000309739.6 ENST00000550607.5 |
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| CDS CCA 72 bp | CCGACCAGAACGAGCTTACATCTGGCCACGACTGGCTaGGGGGCCCGTCTCTCCTTCATGGTTGCAGTGTCC | + |
|
Preference number: 6 (lower is better) Translates to: PTRTSLHLATTG*GARLSFMVAVS Trigger: GGACACTGCAACCATGAAGGAGAGACGGGCCCCCCAGCCAGTCGTGGCCAGATGTAAGCTCGTTCTGGTCGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000309739.6 ENST00000551243.1 ENST00000649147.1 |
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| CDS GCA 72 bp | CGTCACTCCCCAGGGCCACTCCAGAGGGGACCCAGCTaGCAGTCTCCAAACACCACCCTCTGCAGATTATTC | + |
|
Preference number: 6 (lower is better) Translates to: RHSPGPLQRGPS*QSPNTTLCRLF Trigger: GAATAATCTGCAGAGGGTGGTGTTTGGAGACTGGCAGCTGGGTCCCCTCTGGAGTGGCCCTGGGGAGTGACG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000548445.1 |
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| CDS GCA 72 bp | GCATTAATGCAGTGGGCCAAAATGGCTCTGGGACGCTaGCTCTGTGCGTCACTCCCCAGGGCCACTCCAGAG | + |
|
Preference number: 6 (lower is better) Translates to: ALMQWAKMALGR*LCASLPRATPE Trigger: CTCTGGAGTGGCCCTGGGGAGTGACGCACAGAGGCAGCGTCCCAGAGCCATTTTGGCCCACTGCATTAATGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000548445.1 |
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| CDS CCA 72 bp | ACAACCCTGCAGGAGGGGGTGAGGGCATTAATGCAGTaGGCCAAAATGGCTCTGGGACGCTGCCTCTGTGCG | + |
|
Preference number: 6 (lower is better) Translates to: TTLQEGVRALMQ*AKMALGRCLCA Trigger: CGCACAGAGGCAGCGTCCCAGAGCCATTTTGGCCCACTGCATTAATGCCCTCACCCCCTCCTGCAGGGTTGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000548445.1 |
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| CDS CAA 90 bp | GTAGAAGAGATGAGTTCAGAGCGACTGGGGAGGTGGAGCAGTCGTTaGGAGAGGCTTCGGACAGGGCTCTTCTGGGGCAGTGGGCTAGGC | + |
|
Preference number: 6 (lower is better) Translates to: VEEMSSERLGRWSSR*ERLRTGLFWGSGLG Trigger: GCCTAGCCCACTGCCCCAGAAGAGCCCTGTCCGAAGCCTCTCCAAACGACTGCTCCACCTCCCCAGTCGCTCTGAACTCATCTCTTCTAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000309739.6 ENST00000548445.1 ENST00000550607.5 ENST00000649147.1 |
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| CDS GCA 72 bp | TCCGCGGGACTTGAACTTCGATTCAGAAGGGAGGGTTaGGCCAGGTGCGTCTCAGCACGCCAATCAAGCCAG | + |
|
Preference number: 6 (lower is better) Translates to: SAGLELRFRREG*ARCVSARQSSQ Trigger: CTGGCTTGATTGGCGTGCTGAGACGCACCTGGCGCAACCCTCCCTTCTGAATCGAAGTTCAAGTCCCGCGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000309739.6 ENST00000551243.1 ENST00000649147.1 |
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| CDS CAA 72 bp | ATGAGTTCAGAGCGACTGGGGAGGTGGAGCAGTCGTTaGGAGAGGCTTCGGACAGGGCTCTTCTGGGGCAGT | + |
|
Preference number: 6 (lower is better) Translates to: MSSERLGRWSSR*ERLRTGLFWGS Trigger: ACTGCCCCAGAAGAGCCCTGTCCGAAGCCTCTCCAAACGACTGCTCCACCTCCCCAGTCGCTCTGAACTCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000309739.6 ENST00000548445.1 ENST00000550607.5 ENST00000649147.1 |
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| CDS CAA 90 bp | TTGGAGAGGCTTCGGACAGGGCTCTTCTGGGGCAGTGGGCTAGGCTaGTTCAGACACAGCATGGATGCCGTCCGAAAGATGCTGTGGATG | + |
|
Preference number: 6 (lower is better) Translates to: LERLRTGLFWGSGLG*FRHSMDAVRKMLWM Trigger: CATCCACAGCATCTTTCGGACGGCATCCATGCTGTGTCTGAACAAGCCTAGCCCACTGCCCCAGAAGAGCCCTGTCCGAAGCCTCTCCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000309739.6 ENST00000548445.1 ENST00000550607.5 ENST00000649147.1 |
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| CDS TCA 72 bp | CCGTCTCTCCTTCATGGTTGCAGTGTCCGCGGGACTTaGACTTCGATTCAGAAGGGAGGGTTGCGCCAGGTG | + |
|
Preference number: 6 (lower is better) Translates to: PSLLHGCSVRGT*TSIQKGGLRQV Trigger: CACCTGGCGCAACCCTCCCTTCTGAATCGAAGTTCAAGTCCCGCGGACACTGCAACCATGAAGGAGAGACGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000309739.6 ENST00000551243.1 ENST00000649147.1 |
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| CDS CCA 72 bp | TTTGGAGAGGCTTCGGACAGGGCTCTTCTGGGGCAGTaGGCTAGGCTTGTTCAGACACAGCATGGATGCCGT | + |
|
Preference number: 6 (lower is better) Translates to: FGEASDRALLGQ*ARLVQTQHGCR Trigger: ACGGCATCCATGCTGTGTCTGAACAAGCCTAGCCCACTGCCCCAGAAGAGCCCTGTCCGAAGCCTCTCCAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000309739.6 ENST00000548445.1 ENST00000550607.5 ENST00000649147.1 |
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| CDS CCA 72 bp | AGCAGTCGTTTGGAGAGGCTTCGGACAGGGCTCTTCTaGGGCAGTGGGCTAGGCTTGTTCAGACACAGCATG | + |
|
Preference number: 6 (lower is better) Translates to: SSRLERLRTGLF*GSGLGLFRHSM Trigger: CATGCTGTGTCTGAACAAGCCTAGCCCACTGCCCCAGAAGAGCCCTGTCCGAAGCCTCTCCAAACGACTGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000309739.6 ENST00000548445.1 ENST00000550607.5 ENST00000649147.1 |
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| CDS CCA 72 bp | CAGAGTGCTGACCCAGGAGCCTGTTCCCCCAGTCTATaGCTCAGTCACCAGAGAGGGCACAAGGGCAATTCT | + |
|
Preference number: 6 (lower is better) Translates to: QSADPGACSPSL*LSHQRGHKGNS Trigger: AGAATTGCCCTTGTGCCCTCTCTGGTGACTGAGCCATAGACTGGGGGAACAGGCTCCTGGGTCAGCACTCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000649147.1 |
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| CDS CAA 72 bp | CCCGTCTCTCCTTCATGGTTGCAGTGTCCGCGGGACTaGAACTTCGATTCAGAAGGGAGGGTTGCGCCAGGT | + |
|
Preference number: 6 (lower is better) Translates to: PVSPSWLQCPRD*NFDSEGRVAPG Trigger: ACCTGGCGCAACCCTCCCTTCTGAATCGAAGTTCAAGTCCCGCGGACACTGCAACCATGAAGGAGAGACGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000309739.6 ENST00000551243.1 ENST00000649147.1 |
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| CDS CAA 72 bp | CTTCGGACAGGGCTCTTCTGGGGCAGTGGGCTAGGCTaGTTCAGACACAGCATGGATGCCGTCCGAAAGATG | + |
|
Preference number: 6 (lower is better) Translates to: LRTGLFWGSGLG*FRHSMDAVRKM Trigger: CATCTTTCGGACGGCATCCATGCTGTGTCTGAACAAGCCTAGCCCACTGCCCCAGAAGAGCCCTGTCCGAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000309739.6 ENST00000548445.1 ENST00000550607.5 ENST00000649147.1 |
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| CDS CAA 72 bp | CTGAGCCTTCCAGGTAGATTTCTGCACCCAGCTGCTTaGCTATTGCACAACCCTGCAGGAGGGGGTGAGGGC | + |
|
Preference number: 6 (lower is better) Translates to: LSLPGRFLHPAA*LLHNPAGGGEG Trigger: GCCCTCACCCCCTCCTGCAGGGTTGTGCAATAGCAAAGCAGCTGGGTGCAGAAATCTACCTGGAAGGCTCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000548445.1 |
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| CDS CCA 72 bp | AAGGTAGAAGAGATGAGTTCAGAGCGACTGGGGAGGTaGAGCAGTCGTTTGGAGAGGCTTCGGACAGGGCTC | + |
|
Preference number: 6 (lower is better) Translates to: KVEEMSSERLGR*SSRLERLRTGL Trigger: GAGCCCTGTCCGAAGCCTCTCCAAACGACTGCTCCACCTCCCCAGTCGCTCTGAACTCATCTCTTCTACCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000309739.6 ENST00000548445.1 ENST00000550607.5 ENST00000649147.1 |
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| CDS CCA 72 bp | AAGCATTTCATACCAGCAGCTCAGCTCAGACCTGCCTaGCTTGCCCATTCTCAGTGGGACTGGGATCAGGGT | + |
|
Preference number: 6 (lower is better) Translates to: KHFIPAAQLRPA*LAHSQWDWDQG Trigger: ACCCTGATCCCAGTCCCACTGAGAATGGGCAAGCCAGGCAGGTCTGAGCTGAGCTGCTGGTATGAAATGCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000649147.1 |
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| CDS GCA 72 bp | ATTCTCAGTGGGACTGGGATCAGGGTCTATAGAAGCTaGCTCCAAAAGGTCCCATGCCTGACCCTCATACCG | + |
|
Preference number: 6 (lower is better) Translates to: ILSGTGIRVYRS*LQKVPCLTLIP Trigger: CGGTATGAGGGTCAGGCATGGGACCTTTTGGAGGCAGCTTCTATAGACCCTGATCCCAGTCCCACTGAGAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000649147.1 |
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| CDS GCA 72 bp | TTCCAGGTAGATTTCTGCACCCAGCTGCTTTGCTATTaGACAACCCTGCAGGAGGGGGTGAGGGCATTAATG | + |
|
Preference number: 6 (lower is better) Translates to: FQVDFCTQLLCY*TTLQEGVRALM Trigger: CATTAATGCCCTCACCCCCTCCTGCAGGGTTGTGCAATAGCAAAGCAGCTGGGTGCAGAAATCTACCTGGAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000548445.1 |
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| CDS GCA 72 bp | CAGCCCAGTCCTCCCTCTGAGTCACAGCATCACCGTTaGACTAATTACATCATTTTCCTGCCCATGAGGCCT | + |
|
Preference number: 6 (lower is better) Translates to: QPSPPSESQHHR*TNYIIFLPMRP Trigger: AGGCCTCATGGGCAGGAAAATGATGTAATTAGTGCAACGGTGATGCTGTGACTCAGAGGGAGGACTGGGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000649147.1 |
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| CDS CCA 72 bp | TCCTGGTGTAGGCCAGAAAGAGCTGATGGTGAGCCATaGTGTTTTCCTTCCCCAATAGGCCTAAGCCCTAAA | + |
|
Preference number: 6 (lower is better) Translates to: SWCRPERADGEP*CFPSPIGLSPK Trigger: TTTAGGGCTTAGGCCTATTGGGGAAGGAAAACACCATGGCTCACCATCAGCTCTTTCTGGCCTACACCAGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000553260.1 |
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| CDS CAA 72 bp | AGTTCCAGTCCCAGAGCTGTAGCTAATGGTGTGGCCTaGGGCAAATCTCTTCCTTCCCTGGCTTCCATTTCT | + |
|
Preference number: 6 (lower is better) Translates to: SSSPRAVANGVA*GKSLPSLASIS Trigger: AGAAATGGAAGCCAGGGAAGGAAGAGATTTGCCCAAGGCCACACCATTAGCTACAGCTCTGGGACTGGAACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000649147.1 |
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| CDS GCA 72 bp | ATCAGGGTCTATAGAAGCTGCCTCCAAAAGGTCCCATaGCTGACCCTCATACCGTATCACCTAAAGGTTCTC | + |
|
Preference number: 6 (lower is better) Translates to: IRVYRSCLQKVP*LTLIPYHLKVL Trigger: GAGAACCTTTAGGTGATACGGTATGAGGGTCAGGCATGGGACCTTTTGGAGGCAGCTTCTATAGACCCTGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000649147.1 |
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| CDS CCA 72 bp | CTGTCTCCAAACAGGCTGTGTAATTTTCGAACACGGTaGGCACATAGGTCTCTGGATAGCAATCCTTCGCTA | + |
|
Preference number: 6 (lower is better) Translates to: LSPNRLCNFRTR*AHRSLDSNPSL Trigger: TAGCGAAGGATTGCTATCCAGAGACCTATGTGCCCACCGTGTTCGAAAATTACACAGCCTGTTTGGAGACAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000309739.6 ENST00000649147.1 |
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| CDS CCA 72 bp | GCTAGATACACAAGGTTTCCTAGGACTCCTCAGCATTaGTGGATCTGCCCAGACCTAAGCATTTCATACCAG | + |
|
Preference number: 6 (lower is better) Translates to: ARYTRFPRTPQH*WICPDLSISYQ Trigger: CTGGTATGAAATGCTTAGGTCTGGGCAGATCCACCAATGCTGAGGAGTCCTAGGAAACCTTGTGTATCTAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000649147.1 |
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| CDS CAA 72 bp | CACACAACTATAGTCTCAAATACTAGAGAGGATCCCTaGAGCCCAGGAGTTCTGCACTGTAGTGAGCTAGGA | + |
|
Preference number: 6 (lower is better) Translates to: HTTIVSNTREDP*SPGVLHCSELG Trigger: TCCTAGCTCACTACAGTGCAGAACTCCTGGGCTCAAGGGATCCTCTCTAGTATTTGAGACTATAGTTGTGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000548445.1 |
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