RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RNASET2 (Homo sapiens)

Ensembl gene IDs: ENSG00000026297

Ensembl transcript IDs: ENST00000028008.9, ENST00000358165.7, ENST00000366855.10, ENST00000421787.5, ENST00000476238.6, ENST00000478180.6, ENST00000496851.6, ENST00000499370.6, ENST00000508775.6, ENST00000510083.1, ENST00000611959.2, ENST00000620173.5, ENST00000682498.1, ENST00000683158.1, ENST00000683333.1, ENST00000683770.1, ENST00000683968.1, ENST00000684086.1, ENST00000684236.1

Found 580 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CTGTGGCCTAGTCCACGGGTCCTCTTTTCCATGGTGCCGCAGAGATaGTCCAGGCAGACGCCTGCTCTGGCTGAGACCCGGGCCAGCTGC +
Preference number: 1 (lower is better)
Translates to: LWPSPRVLFSMVPQR*SRQTPALAETRASC
Trigger: GCAGCTGGCCCGGGTCTCAGCCAGAGCAGGCGTCTGCCTGGAGCATCTCTGCGGCACCATGGAAAAGAGGACCCGTGGACTAGGCCACAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508775.6
3UTR TCA 90 bp CCAGGCATCAGCGTGGGCTCCTGCCATGCGTGGAGCTCTTCGTCTTaGCAGGGTCCCTGCGCCAAGAAGGCAACAGGCTCCGAGGGGAAA +
Preference number: 1 (lower is better)
Translates to: PGISVGSCHAWSSSS*QGPCAKKATGSEGK
Trigger: TTTCCCCTCGGAGCCTGTTGCCTTCTTGGCGCAGGGACCCTGTCAAGACGAAGAGCTCCACGCATGGCAGGAGCCCACGCTGATGCCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508775.6
3UTR CCA 90 bp AGAGAAGGGCCGAGGGACAATGACAAGGTGGGGACCCTGGACCCTTaGGCTCCGCTAGCCTTCCCCACAGCTTGCAGAAGAGGGCTCAGC +
Preference number: 1 (lower is better)
Translates to: REGPRDNDKVGTLDP*APLAFPTACRRGLS
Trigger: GCTGAGCCCTCTTCTGCAAGCTGTGGGGAAGGCTAGCGGAGCCCAAGGGTCCAGGGTCCCCACCTTGTCATTGTCCCTCGGCCCTTCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508775.6
3UTR GCA 90 bp TCCACTCATCCCTGTGGCCTAGTCCACGGGTCCTCTTTTCCATGGTaGCGCAGAGATGCTCCAGGCAGACGCCTGCTCTGGCTGAGACCC +
Preference number: 1 (lower is better)
Translates to: STHPCGLVHGSSFPW*RRDAPGRRLLWLRP
Trigger: GGGTCTCAGCCAGAGCAGGCGTCTGCCTGGAGCATCTCTGCGGCACCATGGAAAAGAGGACCCGTGGACTAGGCCACAGGGATGAGTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508775.6
3UTR GCA 90 bp GAAGCTGTCAGGCCTGGCTGGGTGCTGCCTGTCTCAGGCTCTTACTaGAGAGCTTGTTTCCAGAGGGCCAGAGGCCGTCCTGTGTCTCCT +
Preference number: 1 (lower is better)
Translates to: EAVRPGWVLPVSGSY*RACFQRARGRPVSP
Trigger: AGGAGACACAGGACGGCCTCTGGCCCTCTGGAAACAAGCTCTGCAGTAAGAGCCTGAGACAGGCAGCACCCAGCCAGGCCTGACAGCTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508775.6
3UTR CCA 90 bp GGCTCAGGGGGTTTAGGGCCAGCGGCTGCTCCAGAGCACACTGGGTaGGACTTGCTCTCCTGCATTTGTCCAAAGCCGCACAACACAGGA +
Preference number: 1 (lower is better)
Translates to: GSGGLGPAAAPEHTG*DLLSCICPKPHNTG
Trigger: TCCTGTGTTGTGCGGCTTTGGACAAATGCAGGAGAGCAAGTCCCACCCAGTGTGCTCTGGAGCAGCCGCTGGCCCTAAACCCCCTGAGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000421787.5
3UTR CCA 90 bp GCCGCCATACTGGGGAGGTGTGATCTGGGAGCAGAGAGCCATGGTTaGTTACGGAGAGTGGCACAAACACGGTGCCAGCGTCCAGCACTG +
Preference number: 1 (lower is better)
Translates to: AAILGRCDLGAESHG*LRRVAQTRCQRPAL
Trigger: CAGTGCTGGACGCTGGCACCGTGTTTGTGCCACTCTCCGTAACCAACCATGGCTCTCTGCTCCCAGATCACACCTCCCCAGTATGGCGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508775.6
3UTR TCA 90 bp GTTGGTTACGGAGAGTGGCACAAACACGGTGCCAGCGTCCAGCACTaGCAGTCAGGTGGCGTGGCAGTCAATGCATGGCCCAGATGGGAG +
Preference number: 1 (lower is better)
Translates to: VGYGEWHKHGASVQH*QSGGVAVNAWPRWE
Trigger: CTCCCATCTGGGCCATGCATTGACTGCCACGCCACCTGACTGTCAGTGCTGGACGCTGGCACCGTGTTTGTGCCACTCTCCGTAACCAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508775.6
3UTR GCA 90 bp GGAGCAGAGAGCCATGGTTGGTTACGGAGAGTGGCACAAACACGGTaGCAGCGTCCAGCACTGACAGTCAGGTGGCGTGGCAGTCAATGC +
Preference number: 1 (lower is better)
Translates to: GAESHGWLRRVAQTR*QRPALTVRWRGSQC
Trigger: GCATTGACTGCCACGCCACCTGACTGTCAGTGCTGGACGCTGGCACCGTGTTTGTGCCACTCTCCGTAACCAACCATGGCTCTCTGCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508775.6
3UTR CCA 90 bp GCCTGCTCCTCCTTCCACACATACGAGCCTGAGACCCCGCTCACATaGGAGGCATTTCTCAGTCACCTCCGCCCAGTTACAGCGAGAACC +
Preference number: 1 (lower is better)
Translates to: ACSSFHTYEPETPLT*EAFLSHLRPVTART
Trigger: GGTTCTCGCTGTAACTGGGCGGAGGTGACTGAGAAATGCCTCCCATGTGAGCGGGGTCTCAGGCTCGTATGTGTGGAAGGAGGAGCAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508775.6
3UTR CCA 90 bp AGTTCCACTCATCCCTGTGGCCTAGTCCACGGGTCCTCTTTTCCATaGTGCCGCAGAGATGCTCCAGGCAGACGCCTGCTCTGGCTGAGA +
Preference number: 1 (lower is better)
Translates to: SSTHPCGLVHGSSFP*CRRDAPGRRLLWLR
Trigger: TCTCAGCCAGAGCAGGCGTCTGCCTGGAGCATCTCTGCGGCACCATGGAAAAGAGGACCCGTGGACTAGGCCACAGGGATGAGTGGAACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508775.6
3UTR GCA 90 bp AATGGCAGGAAACCAGCACTCCGCAGCCCATGCCTCCCACCAGGATaGTACCTTGTTGGCGTCCCCATCCGCTCTCAAATGCTCACACTC +
Preference number: 1 (lower is better)
Translates to: NGRKPALRSPCLPPG*YLVGVPIRSQMLTL
Trigger: GAGTGTGAGCATTTGAGAGCGGATGGGGACGCCAACAAGGTAGCATCCTGGTGGGAGGCATGGGCTGCGGAGTGCTGGTTTCCTGCCATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508775.6
3UTR GCA 90 bp ACTTCTCCCACCCAGGCCTCTACCCAGTCATCTAGGCATTCTCCCTaGCGTCTAGCCCAAAACCGGAACAGCACAGCCCTCACCTCTGCT +
Preference number: 1 (lower is better)
Translates to: TSPTQASTQSSRHSP*RLAQNRNSTALTSA
Trigger: AGCAGAGGTGAGGGCTGTGCTGTTCCGGTTTTGGGCTAGACGGCAGGGAGAATGCCTAGATGACTGGGTAGAGGCCTGGGTGGGAGAAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508775.6
3UTR GCA 90 bp GCCACTCAGGCGTGGGAGAGCTCCTTTCTCCCCGTGTACGCCACATaGACTCACTCTACAGGGACCACAACATCCAATTCACAGGCATGG +
Preference number: 1 (lower is better)
Translates to: ATQAWESSFLPVYAT*THSTGTTTSNSQAW
Trigger: CCATGCCTGTGAATTGGATGTTGTGGTCCCTGTAGAGTGAGTGCATGTGGCGTACACGGGGAGAAAGGAGCTCTCCCACGCCTGAGTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508775.6
3UTR GCA 90 bp TGTCTTAACAACACATGGAAAGCTCCTCACTGCACAGCCCCCAGATaGCTCACTCCACGAGTGAAATCCCTGCACGGCAGGCCGAGAGCG +
Preference number: 1 (lower is better)
Translates to: CLNNTWKAPHCTAPR*LTPRVKSLHGRPRA
Trigger: CGCTCTCGGCCTGCCGTGCAGGGATTTCACTCGTGGAGTGAGGCATCTGGGGGCTGTGCAGTGAGGAGCTTTCCATGTGTTGTTAAGACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000508775.6
3UTR GCA 90 bp ACCTCCATCATGCAGCCACTGTCTCTGCTGTCCAGTCCTCACCTATaGCACATTGTCCGCATCTACACTGTACGGCCCTCCCCTGTGCCA +
Preference number: 1 (lower is better)
Translates to: TSIMQPLSLLSSPHL*HIVRIYTVRPSPVP
Trigger: TGGCACAGGGGAGGGCCGTACAGTGTAGATGCGGACAATGTGGCATAGGTGAGGACTGGACAGCAGAGACAGTGGCTGCATGATGGAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508775.6
3UTR CCA 90 bp GCACAGAAGCGAGTTGGACAAAGTCCGGGCCTTTGTAGTGTGACGTaGCCATTAGGGCCCACAGATCCTTCCCTGCAGTTGCTGTCTCCC +
Preference number: 1 (lower is better)
Translates to: AQKRVGQSPGLCSVT*PLGPTDPSLQLLSP
Trigger: GGGAGACAGCAACTGCAGGGAAGGATCTGTGGGCCCTAATGGCCACGTCACACTACAAAGGCCCGGACTTTGTCCAACTCGCTTCTGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508775.6
3UTR TCA 90 bp AAATCCCTGCACGGCAGGCCGAGAGCGTGGGTGCAGCAGTCTGCCTaGCGTGAGAGCCATGTCATCACATATCTAGAAGGTAAGGGTACC +
Preference number: 1 (lower is better)
Translates to: KSLHGRPRAWVQQSA*RESHVITYLEGKGT
Trigger: GGTACCCTTACCTTCTAGATATGTGATGACATGGCTCTCACGTCAGGCAGACTGCTGCACCCACGCTCTCGGCCTGCCGTGCAGGGATTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508775.6
3UTR CCA 90 bp ATCCCCCATCATCTCACTCTGTCTGTCTGCAGAAGCTGTCAGGCCTaGCTGGGTGCTGCCTGTCTCAGGCTCTTACTGCAGAGCTTGTTT +
Preference number: 1 (lower is better)
Translates to: IPHHLTLSVCRSCQA*LGAACLRLLLQSLF
Trigger: AAACAAGCTCTGCAGTAAGAGCCTGAGACAGGCAGCACCCAGCCAGGCCTGACAGCTTCTGCAGACAGACAGAGTGAGATGATGGGGGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000508775.6
3UTR GCA 90 bp GCTGTGTTCAGTACTGGGGCAGCACGAGCAGCCCACATCTCAGGGTaGAGTCCAAGACATATGGTCATCAAGACAGAAGAGCAGATGGTG +
Preference number: 1 (lower is better)
Translates to: AVFSTGAARAAHISG*SPRHMVIKTEEQMV
Trigger: CACCATCTGCTCTTCTGTCTTGATGACCATATGTCTTGGACTGCACCCTGAGATGTGGGCTGCTCGTGCTGCCCCAGTACTGAACACAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508775.6
3UTR TCA 90 bp AAAAGTGAAAACAGGCGATCTGCATGTTTCCTCATCTGGGCGTGGTaGGAAGCCAACAGCAGGCACCTTCCACTGGGACCAGTGCTGCAT +
Preference number: 1 (lower is better)
Translates to: KSENRRSACFLIWAW*EANSRHLPLGPVLH
Trigger: ATGCAGCACTGGTCCCAGTGGAAGGTGCCTGCTGTTGGCTTCTCACCACGCCCAGATGAGGAAACATGCAGATCGCCTGTTTTCACTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508775.6
3UTR GCA 90 bp TCACTAGAGAACACTGGCTTAGAGCTGATGTGCCTCAGACACAGGTaGACTCATGGAGCACAGAAGCGAGTTGGACAAAGTCCGGGCCTT +
Preference number: 1 (lower is better)
Translates to: SLENTGLELMCLRHR*THGAQKRVGQSPGL
Trigger: AAGGCCCGGACTTTGTCCAACTCGCTTCTGTGCTCCATGAGTGCACCTGTGTCTGAGGCACATCAGCTCTAAGCCAGTGTTCTCTAGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508775.6
3UTR CCA 90 bp ACAATCTGTGAGCTTTATCCCAAGCACAAAACAGCCACTCAGGCGTaGGAGAGCTCCTTTCTCCCCGTGTACGCCACATGCACTCACTCT +
Preference number: 1 (lower is better)
Translates to: TICELYPKHKTATQA*ESSFLPVYATCTHS
Trigger: AGAGTGAGTGCATGTGGCGTACACGGGGAGAAAGGAGCTCTCCCACGCCTGAGTGGCTGTTTTGTGCTTGGGATAAAGCTCACAGATTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508775.6
3UTR CCA 90 bp ATTGTCCGCATCTACACTGTACGGCCCTCCCCTGTGCCATCCAGCTaGCATCTTCTATGTAACACAACAAGAGCTGGAAGAGAAGAGGCC +
Preference number: 1 (lower is better)
Translates to: IVRIYTVRPSPVPSS*HLLCNTTRAGREEA
Trigger: GGCCTCTTCTCTTCCAGCTCTTGTTGTGTTACATAGAAGATGCCAGCTGGATGGCACAGGGGAGGGCCGTACAGTGTAGATGCGGACAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508775.6
3UTR TCA 90 bp ACCTGGCTACCCTCTGATAAGAAGGAAGTGAGGCCTGACAGAAACTaGCCTTCCAGTAACCTGGAAGAGACTGCTCTGACGGAGACAGGA +
Preference number: 1 (lower is better)
Translates to: TWLPSDKKEVRPDRN*PSSNLEETALTETG
Trigger: TCCTGTCTCCGTCAGAGCAGTCTCTTCCAGGTTACTGGAAGGTCAGTTTCTGTCAGGCCTCACTTCCTTCTTATCAGAGGGTAGCCAGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508775.6
3UTR GCA 90 bp ACCTATGCCACATTGTCCGCATCTACACTGTACGGCCCTCCCCTGTaGCATCCAGCTGGCATCTTCTATGTAACACAACAAGAGCTGGAA +
Preference number: 1 (lower is better)
Translates to: TYATLSASTLYGPPL*HPAGIFYVTQQELE
Trigger: TTCCAGCTCTTGTTGTGTTACATAGAAGATGCCAGCTGGATGGCACAGGGGAGGGCCGTACAGTGTAGATGCGGACAATGTGGCATAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508775.6
3UTR GCA 90 bp ACAATGCTAACAGGTTGTCTTAACAACACATGGAAAGCTCCTCACTaGACAGCCCCCAGATGCCTCACTCCACGAGTGAAATCCCTGCAC +
Preference number: 1 (lower is better)
Translates to: TMLTGCLNNTWKAPH*TAPRCLTPRVKSLH
Trigger: GTGCAGGGATTTCACTCGTGGAGTGAGGCATCTGGGGGCTGTGCAGTGAGGAGCTTTCCATGTGTTGTTAAGACAACCTGTTAGCATTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000508775.6
3UTR CCA 90 bp TTTACCTATGGTGTCTTTTTCCACCATAAGTTCCACTCATCCCTGTaGCCTAGTCCACGGGTCCTCTTTTCCATGGTGCCGCAGAGATGC +
Preference number: 1 (lower is better)
Translates to: FTYGVFFHHKFHSSL*PSPRVLFSMVPQRC
Trigger: GCATCTCTGCGGCACCATGGAAAAGAGGACCCGTGGACTAGGCCACAGGGATGAGTGGAACTTATGGTGGAAAAAGACACCATAGGTAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000508775.6
3UTR TCA 90 bp GGTGCAGTCCAAGACATATGGTCATCAAGACAGAAGAGCAGATGGTaGCAGGTACCAACCACCAAAGCTGTACACGCCAGGTTCAATGTC +
Preference number: 1 (lower is better)
Translates to: GAVQDIWSSRQKSRW*QVPTTKAVHARFNV
Trigger: GACATTGAACCTGGCGTGTACAGCTTTGGTGGTTGGTACCTGTCACCATCTGCTCTTCTGTCTTGATGACCATATGTCTTGGACTGCACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508775.6
3UTR GCA 90 bp TCCCTGAGGACGCAGAGCAAATGCAGGAAATCACGCCCTTCCAGGTaGAAAACAAATCAGATCTTGTCCCTCTCACAGGCATCAAAACAC +
Preference number: 1 (lower is better)
Translates to: SLRTQSKCRKSRPSR*KTNQILSLSQASKH
Trigger: GTGTTTTGATGCCTGTGAGAGGGACAAGATCTGATTTGTTTTGCACCTGGAAGGGCGTGATTTCCTGCATTTGCTCTGCGTCCTCAGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508775.6
3UTR CCA 90 bp AGAGAAATGCTCTTGGGTACAGCAATAGCCCTGCTGAGAAGGGGCTaGTCTGAAGGAGTTTCATGGGAACCTGGTTTTCTTGTCTCGCTT +
Preference number: 1 (lower is better)
Translates to: REMLLGTAIALLRRG*SEGVSWEPGFLVSL
Trigger: AAGCGAGACAAGAAAACCAGGTTCCCATGAAACTCCTTCAGACCAGCCCCTTCTCAGCAGGGCTATTGCTGTACCCAAGAGCATTTCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508775.6
3UTR TCA 90 bp CTTCCCCTTCTGTCTCCTGCGGCTCATAAGTGCCTTATACTTACATaGTCTGAGGCAGGTTATCAAACGCTCATGTTCTACCTGCTCCTG +
Preference number: 1 (lower is better)
Translates to: LPLLSPAAHKCLILT*SEAGYQTLMFYLLL
Trigger: CAGGAGCAGGTAGAACATGAGCGTTTGATAACCTGCCTCAGATCATGTAAGTATAAGGCACTTATGAGCCGCAGGAGACAGAAGGGGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508775.6
3UTR GCA 90 bp AGAGGGCTCAGCTCCTCCATTACAGAAGAGACAAAATACAGGGACTaGTTCCATCAAATCCCCCATCATCTCACTCTGTCTGTCTGCAGA +
Preference number: 1 (lower is better)
Translates to: RGLSSSITEETKYRD*FHQIPHHLTLSVCR
Trigger: TCTGCAGACAGACAGAGTGAGATGATGGGGGATTTGATGGAAGCAGTCCCTGTATTTTGTCTCTTCTGTAATGGAGGAGCTGAGCCCTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000508775.6
3UTR GCA 90 bp AGTCCAACTCTAAAGTACACCCACTCCCTGAGGACGCAGAGCAAATaGAGGAAATCACGCCCTTCCAGGTGCAAAACAAATCAGATCTTG +
Preference number: 1 (lower is better)
Translates to: SPTLKYTHSLRTQSK*RKSRPSRCKTNQIL
Trigger: CAAGATCTGATTTGTTTTGCACCTGGAAGGGCGTGATTTCCTGCATTTGCTCTGCGTCCTCAGGGAGTGGGTGTACTTTAGAGTTGGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508775.6
3UTR GCA 90 bp CATTTATTCACTCCATCACTAGAGAACACTGGCTTAGAGCTGATGTaGCTCAGACACAGGTGCACTCATGGAGCACAGAAGCGAGTTGGA +
Preference number: 1 (lower is better)
Translates to: HLFTPSLENTGLELM*LRHRCTHGAQKRVG
Trigger: TCCAACTCGCTTCTGTGCTCCATGAGTGCACCTGTGTCTGAGGCACATCAGCTCTAAGCCAGTGTTCTCTAGTGATGGAGTGAATAAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508775.6
3UTR CCA 90 bp ATATTTTCAAAACACCTACTATGCTCAAGTAGCTGTGTTCAGTACTaGGGCAGCACGAGCAGCCCACATCTCAGGGTGCAGTCCAAGACA +
Preference number: 1 (lower is better)
Translates to: IFSKHLLCSSSCVQY*GSTSSPHLRVQSKT
Trigger: TGTCTTGGACTGCACCCTGAGATGTGGGCTGCTCGTGCTGCCCCAGTACTGAACACAGCTACTTGAGCATAGTAGGTGTTTTGAAAATAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508775.6
3UTR TCA 90 bp CCGCCCAGTTACAGCGAGAACCGTGTGGTCAGAGTTGCATCTTCCTaGGTTGAATCTGGAAAATGCACGACCTACTTGTTTAATGATGTA +
Preference number: 1 (lower is better)
Translates to: PPSYSENRVVRVASS*VESGKCTTYLFNDV
Trigger: TACATCATTAAACAAGTAGGTCGTGCATTTTCCAGATTCAACTCAGGAAGATGCAACTCTGACCACACGGTTCTCGCTGTAACTGGGCGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508775.6
3UTR GCA 90 bp CTGGAGGAACTGCAAACATACATTGCTAAGTGCAAGAAGCCAGTCTaGAGAGGCTACATACTGTATGATTCCAACGACGTGACAATTTGG +
Preference number: 1 (lower is better)
Translates to: LEELQTYIAKCKKPV*RGYILYDSNDVTIW
Trigger: CCAAATTGTCACGTCGTTGGAATCATACAGTATGTAGCCTCTGCAGACTGGCTTCTTGCACTTAGCAATGTATGTTTGCAGTTCCTCCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421787.5
3UTR TCA 90 bp CATGATCTGAGGCAGGTTATCAAACGCTCATGTTCTACCTGCTCCTaGGCTCTAGGCCAAAATAGGAATATTAAGAGAGCCAAGCATTTG +
Preference number: 1 (lower is better)
Translates to: HDLRQVIKRSCSTCS*ALGQNRNIKRAKHL
Trigger: CAAATGCTTGGCTCTCTTAATATTCCTATTTTGGCCTAGAGCTCAGGAGCAGGTAGAACATGAGCGTTTGATAACCTGCCTCAGATCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508775.6
3UTR GCA 90 bp ATCAAAACACAAATCATCAGTTCCCGACAGAAACAAATCCTGCCCTaGCAAGCCAACAGAAAAACACTGGAGACAGAAATGAGCTCAGAG +
Preference number: 1 (lower is better)
Translates to: IKTQIISSRQKQILP*QANRKTLETEMSSE
Trigger: CTCTGAGCTCATTTCTGTCTCCAGTGTTTTTCTGTTGGCTTGGCAGGGCAGGATTTGTTTCTGTCGGGAACTGATGATTTGTGTTTTGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000508775.6
3UTR CCA 90 bp ACATGCACTCACTCTACAGGGACCACAACATCCAATTCACAGGCATaGAGGGGAAACAGCAAAATAAACAGACTTCACTTTGGAGTTGTT +
Preference number: 1 (lower is better)
Translates to: TCTHSTGTTTSNSQA*RGNSKINRLHFGVV
Trigger: AACAACTCCAAAGTGAAGTCTGTTTATTTTGCTGTTTCCCCTCCATGCCTGTGAATTGGATGTTGTGGTCCCTGTAGAGTGAGTGCATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508775.6
3UTR GCA 90 bp AGTCATGAAAAGACACTGGAGGAACTGCAAACATACATTGCTAAGTaGAAGAAGCCAGTCTGCAGAGGCTACATACTGTATGATTCCAAC +
Preference number: 1 (lower is better)
Translates to: SHEKTLEELQTYIAK*KKPVCRGYILYDSN
Trigger: GTTGGAATCATACAGTATGTAGCCTCTGCAGACTGGCTTCTTGCACTTAGCAATGTATGTTTGCAGTTCCTCCAGTGTCTTTTCATGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421787.5
3UTR GCA 90 bp CACTACTGCCCCTTCTATGGGAAACGTAGCTCATCCCATAAGCAATaGAATGGACTTCTTTTCTATAGACGCCCAAATACTGACTTCATA +
Preference number: 1 (lower is better)
Translates to: HYCPFYGKRSSSHKQ*NGLLFYRRPNTDFI
Trigger: TATGAAGTCAGTATTTGGGCGTCTATAGAAAAGAAGTCCATTGCATTGCTTATGGGATGAGCTACGTTTCCCATAGAAGGGGCAGTAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508775.6
3UTR CCA 90 bp TTTCAGCAACAAAAACCAATGAGCCGTCGAGTCATGAAAAGACACTaGAGGAACTGCAAACATACATTGCTAAGTGCAAGAAGCCAGTCT +
Preference number: 1 (lower is better)
Translates to: FQQQKPMSRRVMKRH*RNCKHTLLSARSQS
Trigger: AGACTGGCTTCTTGCACTTAGCAATGTATGTTTGCAGTTCCTCCAGTGTCTTTTCATGACTCGACGGCTCATTGGTTTTTGTTGCTGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000421787.5
3UTR TCA 90 bp CCAATCAACCTGAATAGAGTCCACTCAAATGTCTCTTCCCATGGCTaGGTCTATTCTGCTCTAAAACATTCAGAGAAAAACCAATCGGGT +
Preference number: 1 (lower is better)
Translates to: PINLNRVHSNVSSHG*VYSALKHSEKNQSG
Trigger: ACCCGATTGGTTTTTCTCTGAATGTTTTAGAGCAGAATAGACTCAGCCATGGGAAGAGACATTTGAGTGGACTCTATTCAGGTTGATTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000508775.6
3UTR GCA 90 bp AAGCGCGGTGATCTGAGTTATAGTAAAGCCTGTTTCGTTGGTGTTTaGCTGATAATATCTTACACCTCATCTCTCATCATCAGCAAGTTG +
Preference number: 1 (lower is better)
Translates to: KRGDLSYSKACFVGV*LIISYTSSLIISKL
Trigger: CAACTTGCTGATGATGAGAGATGAGGTGTAAGATATTATCAGGCAAACACCAACGAAACAGGCTTTACTATAACTCAGATCACCGCGCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508775.6
3UTR TCA 90 bp ATGGACTTCTTTTCTATAGACGCCCAAATACTGACTTCATATCTGTaGTTGTATCCTGGTAATTTCATTTCAGGAGCTAGAGCTTGTGAG +
Preference number: 1 (lower is better)
Translates to: MDFFSIDAQILTSYL*LYPGNFISGARACE
Trigger: CTCACAAGCTCTAGCTCCTGAAATGAAATTACCAGGATACAATCACAGATATGAAGTCAGTATTTGGGCGTCTATAGAAAAGAAGTCCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508775.6
3UTR CAA 90 bp ACCAGGCATCAGCGTGGGCTCCTGCCATGCGTGGAGCTCTTCGTCTaGACAGGGTCCCTGCGCCAAGAAGGCAACAGGCTCCGAGGGGAA +
Preference number: 2 (lower is better)
Translates to: TRHQRGLLPCVELFV*TGSLRQEGNRLRGE
Trigger: TTCCCCTCGGAGCCTGTTGCCTTCTTGGCGCAGGGACCCTGTCAAGACGAAGAGCTCCACGCATGGCAGGAGCCCACGCTGATGCCTGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508775.6
3UTR-3UTR TCA 90 bp CATGGAGCACAGAAGCGAGTTGGACAAAGTCCGGGCCTTTGTAGTGTGACGTGGGACGCCTGCTCTGGCTaGGACCCGGGCCAGCTGCCC +
Preference number: 2 (lower is better)
Translates to: HGAQKRVGQSPGLCSVTWDACSG*DPGQLP
Trigger: GGGCAGCTGGCCCGGGTCTCAGCCAGAGCAGGCGTC...CCACGTCACACTACAAAGGCCCGGACTTTGTCCAACTCGCTTCTGTGCTCCATG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508775.6
3UTR-3UTR GCA 90 bp GCTCTCCATCCTGAGATGCGCCTGCTCCTTTGTCCCCCTGGGAGACACTTGTACGGCCGAGAGCGTGGGTaGAGCAGTCTGCCTGACGTG +
Preference number: 2 (lower is better)
Translates to: ALHPEMRLLLCPPGRHLYGRERG*SSLPDV
Trigger: CACGTCAGGCAGACTGCTGCACCCACGCTCTCGGCC...GTACAAGTGTCTCCCAGGGGGACAAAGGAGCAGGCGCATCTCAGGATGGAGAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000508775.6
3UTR-3UTR CCA 90 bp TGCCACATTGTCCGCATCTACACTGTACGGCCCTCCCCTGTGCCATCCAGCTGGAGCCCTCATGGGCTGTaGGGAGTGGGTGGAGGCACT +
Preference number: 2 (lower is better)
Translates to: CHIVRIYTVRPSPVPSSWSPHGL*GVGGGT
Trigger: AGTGCCTCCACCCACTCCCCACAGCCCATGAGGGCT...CCAGCTGGATGGCACAGGGGAGGGCCGTACAGTGTAGATGCGGACAATGTGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508775.6
3UTR-3UTR CCA 90 bp CATGGAGCACAGAAGCGAGTTGGACAAAGTCCGGGCCTTTGTAGTGTGACGTGGAGAGGCCCTGGTCCCTaGGCGTGGAGGCGCAGAGCC +
Preference number: 2 (lower is better)
Translates to: HGAQKRVGQSPGLCSVTWRGPGP*AWRRRA
Trigger: GGCTCTGCGCCTCCACGCCCAGGGACCAGGGCCTCT...CCACGTCACACTACAAAGGCCCGGACTTTGTCCAACTCGCTTCTGTGCTCCATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508775.6
3UTR-3UTR CCA 90 bp GCTCTCCATCCTGAGATGCGCCTGCTCCTTTGTCCCCCTGGGAGACACTTGTACCACCAGGCATCAGCGTaGGCTCCTGCCATGCGTGGA +
Preference number: 2 (lower is better)
Translates to: ALHPEMRLLLCPPGRHLYHQASA*APAMRG
Trigger: TCCACGCATGGCAGGAGCCCACGCTGATGCCTGGTG...GTACAAGTGTCTCCCAGGGGGACAAAGGAGCAGGCGCATCTCAGGATGGAGAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000508775.6
3UTR CAA 90 bp CAGGCCTGGCTGGGTGCTGCCTGTCTCAGGCTCTTACTGCAGAGCTaGTTTCCAGAGGGCCAGAGGCCGTCCTGTGTCTCCTTTAATGCC +
Preference number: 2 (lower is better)
Translates to: QAWLGAACLRLLLQS*FPEGQRPSCVSFNA
Trigger: GGCATTAAAGGAGACACAGGACGGCCTCTGGCCCTCTGGAAACAAGCTCTGCAGTAAGAGCCTGAGACAGGCAGCACCCAGCCAGGCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508775.6
3UTR-3UTR GCA 90 bp TGCCACATTGTCCGCATCTACACTGTACGGCCCTCCCCTGTGCCATCCAGCTGGATCCTGAGATGCGCCTaGTCCTTTGTCCCCCTGGGA +
Preference number: 2 (lower is better)
Translates to: CHIVRIYTVRPSPVPSSWILRCA*SFVPLG
Trigger: TCCCAGGGGGACAAAGGAGCAGGCGCATCTCAGGAT...CCAGCTGGATGGCACAGGGGAGGGCCGTACAGTGTAGATGCGGACAATGTGGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000508775.6
3UTR-3UTR TCA 90 bp GCTCTCCATCCTGAGATGCGCCTGCTCCTTTGTCCCCCTGGGAGACACTTGTACTCTAGGACACACCTGTaGCCACACCAGGCCTCCAAC +
Preference number: 2 (lower is better)
Translates to: ALHPEMRLLLCPPGRHLYSRTHL*PHQASN
Trigger: GTTGGAGGCCTGGTGTGGTCACAGGTGTGTCCTAGA...GTACAAGTGTCTCCCAGGGGGACAAAGGAGCAGGCGCATCTCAGGATGGAGAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000508775.6
3UTR-3UTR CCA 90 bp TGCCACATTGTCCGCATCTACACTGTACGGCCCTCCCCTGTGCCATCCAGCTGGGTTGGTTACGGAGAGTaGCACAAACACGGTGCCAGC +
Preference number: 2 (lower is better)
Translates to: CHIVRIYTVRPSPVPSSWVGYGE*HKHGAS
Trigger: GCTGGCACCGTGTTTGTGCCACTCTCCGTAACCAAC...CCAGCTGGATGGCACAGGGGAGGGCCGTACAGTGTAGATGCGGACAATGTGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508775.6
3UTR CAA 90 bp TCATGCAGCCACTGTCTCTGCTGTCCAGTCCTCACCTATGCCACATaGTCCGCATCTACACTGTACGGCCCTCCCCTGTGCCATCCAGCT +
Preference number: 2 (lower is better)
Translates to: SCSHCLCCPVLTYAT*SASTLYGPPLCHPA
Trigger: AGCTGGATGGCACAGGGGAGGGCCGTACAGTGTAGATGCGGACAATGTGGCATAGGTGAGGACTGGACAGCAGAGACAGTGGCTGCATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508775.6
3UTR-3UTR TCA 90 bp TGCCACATTGTCCGCATCTACACTGTACGGCCCTCCCCTGTGCCATCCAGCTGGAGCAAGAGAGTCCCCTaGATCGGTGCCATCTGTCTA +
Preference number: 2 (lower is better)
Translates to: CHIVRIYTVRPSPVPSSWSKRVP*IGAICL
Trigger: TAGACAGATGGCACCGATTCAGGGGACTCTCTTGCT...CCAGCTGGATGGCACAGGGGAGGGCCGTACAGTGTAGATGCGGACAATGTGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508775.6
3UTR-3UTR GCA 90 bp CATGGAGCACAGAAGCGAGTTGGACAAAGTCCGGGCCTTTGTAGTGTGACGTGGATCAGCGTGGGCTCCTaGCATGCGTGGAGCTCTTCG +
Preference number: 2 (lower is better)
Translates to: HGAQKRVGQSPGLCSVTWISVGS*HAWSSS
Trigger: CGAAGAGCTCCACGCATGGCAGGAGCCCACGCTGAT...CCACGTCACACTACAAAGGCCCGGACTTTGTCCAACTCGCTTCTGTGCTCCATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508775.6
3UTR-3UTR CCA 90 bp CATGGAGCACAGAAGCGAGTTGGACAAAGTCCGGGCCTTTGTAGTGTGACGTGGACAGCCACTCAGGCGTaGGAGAGCTCCTTTCTCCCC +
Preference number: 2 (lower is better)
Translates to: HGAQKRVGQSPGLCSVTWTATQA*ESSFLP
Trigger: GGGGAGAAAGGAGCTCTCCCACGCCTGAGTGGCTGT...CCACGTCACACTACAAAGGCCCGGACTTTGTCCAACTCGCTTCTGTGCTCCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508775.6
3UTR-3UTR CCA 90 bp CATGGAGCACAGAAGCGAGTTGGACAAAGTCCGGGCCTTTGTAGTGTGACGTGGAGAAGCTGTCAGGCCTaGCTGGGTGCTGCCTGTCTC +
Preference number: 2 (lower is better)
Translates to: HGAQKRVGQSPGLCSVTWRSCQA*LGAACL
Trigger: GAGACAGGCAGCACCCAGCCAGGCCTGACAGCTTCT...CCACGTCACACTACAAAGGCCCGGACTTTGTCCAACTCGCTTCTGTGCTCCATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508775.6
3UTR-3UTR GCA 90 bp CACCATAAGTTCCACTCATCCCTGTGGCCTAGTCCACGGGTCCTCTTTTCCATGCGTGGGCTCCTGCCATaGGTGGAGCTCTTCGTCTTG +
Preference number: 2 (lower is better)
Translates to: HHKFHSSLWPSPRVLFSMRGLLP*VELFVL
Trigger: CAAGACGAAGAGCTCCACGCATGGCAGGAGCCCACG...CATGGAAAAGAGGACCCGTGGACTAGGCCACAGGGATGAGTGGAACTTATGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508775.6
3UTR-3UTR GCA 90 bp CATGGAGCACAGAAGCGAGTTGGACAAAGTCCGGGCCTTTGTAGTGTGACGTGGTGGAAAGCTCCTCACTaGACAGCCCCCAGATGCCTC +
Preference number: 2 (lower is better)
Translates to: HGAQKRVGQSPGLCSVTWWKAPH*TAPRCL
Trigger: GAGGCATCTGGGGGCTGTGCAGTGAGGAGCTTTCCA...CCACGTCACACTACAAAGGCCCGGACTTTGTCCAACTCGCTTCTGTGCTCCATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000508775.6
3UTR-3UTR CCA 90 bp CATGGAGCACAGAAGCGAGTTGGACAAAGTCCGGGCCTTTGTAGTGTGACGTGGGACAGTCAGGTGGCGTaGCAGTCAATGCATGGCCCA +
Preference number: 2 (lower is better)
Translates to: HGAQKRVGQSPGLCSVTWDSQVA*QSMHGP
Trigger: TGGGCCATGCATTGACTGCCACGCCACCTGACTGTC...CCACGTCACACTACAAAGGCCCGGACTTTGTCCAACTCGCTTCTGTGCTCCATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508775.6
3UTR CAA 90 bp CCAGGTGACAAAGCATTGTCCCCTCCCAGGCCAAGAGAAATGCTCTaGGGTACAGCAATAGCCCTGCTGAGAAGGGGCTGGTCTGAAGGA +
Preference number: 2 (lower is better)
Translates to: PGDKALSPPRPREML*GTAIALLRRGWSEG
Trigger: TCCTTCAGACCAGCCCCTTCTCAGCAGGGCTATTGCTGTACCCAAGAGCATTTCTCTTGGCCTGGGAGGGGACAATGCTTTGTCACCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508775.6
3UTR-3UTR TCA 90 bp CATGGAGCACAGAAGCGAGTTGGACAAAGTCCGGGCCTTTGTAGTGTGACGTGGCCAAGTATGCCTGCCTaGTCTACCAGGGCACTGAAG +
Preference number: 2 (lower is better)
Translates to: HGAQKRVGQSPGLCSVTWPSMPA*STRALK
Trigger: CTTCAGTGCCCTGGTAGATCAGGCAGGCATACTTGG...CCACGTCACACTACAAAGGCCCGGACTTTGTCCAACTCGCTTCTGTGCTCCATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508775.6
3UTR-3UTR TCA 90 bp GCTCTCCATCCTGAGATGCGCCTGCTCCTTTGTCCCCCTGGGAGACACTTGTACTGTTCTACCTGCTCCTaGGCTCTAGGCCAAAATAGG +
Preference number: 2 (lower is better)
Translates to: ALHPEMRLLLCPPGRHLYCSTCS*ALGQNR
Trigger: CCTATTTTGGCCTAGAGCTCAGGAGCAGGTAGAACA...GTACAAGTGTCTCCCAGGGGGACAAAGGAGCAGGCGCATCTCAGGATGGAGAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000508775.6
3UTR-3UTR TCA 90 bp CGACACCTACTTTCTCACCGTCCCATCTGCCTGGTAAACCTTTGTCTCTCTCTGGTGCAGCAGTCTGCCTaGCGTGAGAGCCATGTCATC +
Preference number: 2 (lower is better)
Translates to: RHLLSHRPICLVNLCLSLVQQSA*RESHVI
Trigger: GATGACATGGCTCTCACGTCAGGCAGACTGCTGCAC...CAGAGAGAGACAAAGGTTTACCAGGCAGATGGGACGGTGAGAAAGTAGGTGTCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508775.6
3UTR-3UTR GCA 90 bp CATGGAGCACAGAAGCGAGTTGGACAAAGTCCGGGCCTTTGTAGTGTGACGTGGTGCAGCCACTGTCTCTaGTGTCCAGTCCTCACCTAT +
Preference number: 2 (lower is better)
Translates to: HGAQKRVGQSPGLCSVTWCSHCL*CPVLTY
Trigger: ATAGGTGAGGACTGGACAGCAGAGACAGTGGCTGCA...CCACGTCACACTACAAAGGCCCGGACTTTGTCCAACTCGCTTCTGTGCTCCATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508775.6
3UTR-3UTR CCA 90 bp CATGGAGCACAGAAGCGAGTTGGACAAAGTCCGGGCCTTTGTAGTGTGACGTGGGGGTACCTCCGGTTCTaGAACACACAATGTAGGCAC +
Preference number: 2 (lower is better)
Translates to: HGAQKRVGQSPGLCSVTWGYLRF*NTQCRH
Trigger: GTGCCTACATTGTGTGTTCCAGAACCGGAGGTACCC...CCACGTCACACTACAAAGGCCCGGACTTTGTCCAACTCGCTTCTGTGCTCCATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000508775.6
3UTR-3UTR GCA 90 bp TGCAGAAGAGGGCTCAGCTCCTCCATTACAGAAGAGACAAAATACAGGGACTGCCCCGTGTACGCCACATaGACTCACTCTACAGGGACC +
Preference number: 2 (lower is better)
Translates to: CRRGLSSSITEETKYRDCPVYAT*THSTGT
Trigger: GGTCCCTGTAGAGTGAGTGCATGTGGCGTACACGGG...GCAGTCCCTGTATTTTGTCTCTTCTGTAATGGAGGAGCTGAGCCCTCTTCTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508775.6
3UTR-3UTR GCA 90 bp GCTCTCCATCCTGAGATGCGCCTGCTCCTTTGTCCCCCTGGGAGACACTTGTACTCTAAATTCCAAGTATaGCTGCCTGATCTACCAGGG +
Preference number: 2 (lower is better)
Translates to: ALHPEMRLLLCPPGRHLYSKFQV*LPDLPG
Trigger: CCCTGGTAGATCAGGCAGGCATACTTGGAATTTAGA...GTACAAGTGTCTCCCAGGGGGACAAAGGAGCAGGCGCATCTCAGGATGGAGAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000508775.6
3UTR-3UTR GCA 90 bp GCTCTCCATCCTGAGATGCGCCTGCTCCTTTGTCCCCCTGGGAGACACTTGTACAGTCCCCTGAATCGGTaGCATCTGTCTAAATTCCAA +
Preference number: 2 (lower is better)
Translates to: ALHPEMRLLLCPPGRHLYSPLNR*HLSKFQ
Trigger: TTGGAATTTAGACAGATGGCACCGATTCAGGGGACT...GTACAAGTGTCTCCCAGGGGGACAAAGGAGCAGGCGCATCTCAGGATGGAGAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000508775.6
3UTR-3UTR GCA 90 bp CATGGAGCACAGAAGCGAGTTGGACAAAGTCCGGGCCTTTGTAGTGTGACGTGGGTCTCAGGCTCTTACTaGAGAGCTTGTTTCCAGAGG +
Preference number: 2 (lower is better)
Translates to: HGAQKRVGQSPGLCSVTWVSGSY*RACFQR
Trigger: CCTCTGGAAACAAGCTCTGCAGTAAGAGCCTGAGAC...CCACGTCACACTACAAAGGCCCGGACTTTGTCCAACTCGCTTCTGTGCTCCATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508775.6
3UTR-3UTR GCA 90 bp GCTCTCCATCCTGAGATGCGCCTGCTCCTTTGTCCCCCTGGGAGACACTTGTACTCACGCCCTTCCAGGTaGAAAACAAATCAGATCTTG +
Preference number: 2 (lower is better)
Translates to: ALHPEMRLLLCPPGRHLYSRPSR*KTNQIL
Trigger: CAAGATCTGATTTGTTTTGCACCTGGAAGGGCGTGA...GTACAAGTGTCTCCCAGGGGGACAAAGGAGCAGGCGCATCTCAGGATGGAGAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000508775.6
3UTR-3UTR CCA 90 bp TGCCACATTGTCCGCATCTACACTGTACGGCCCTCCCCTGTGCCATCCAGCTGGTCTGAAGGAGTTTCATaGGAACCTGGTTTTCTTGTC +
Preference number: 2 (lower is better)
Translates to: CHIVRIYTVRPSPVPSSWSEGVS*EPGFLV
Trigger: GACAAGAAAACCAGGTTCCCATGAAACTCCTTCAGA...CCAGCTGGATGGCACAGGGGAGGGCCGTACAGTGTAGATGCGGACAATGTGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508775.6
3UTR-3UTR CCA 90 bp CATGGAGCACAGAAGCGAGTTGGACAAAGTCCGGGCCTTTGTAGTGTGACGTGGGGCCAACCATGGAACTaGGTGTTGATATCCCATGGA +
Preference number: 2 (lower is better)
Translates to: HGAQKRVGQSPGLCSVTWGQPWN*VLISHG
Trigger: TCCATGGGATATCAACACCCAGTTCCATGGTTGGCC...CCACGTCACACTACAAAGGCCCGGACTTTGTCCAACTCGCTTCTGTGCTCCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508775.6
3UTR-3UTR TCA 90 bp TGCAGAAGAGGGCTCAGCTCCTCCATTACAGAAGAGACAAAATACAGGGACTGCTGGAAGAGACTGCTCTaGCGGAGACAGGAGATGGCT +
Preference number: 2 (lower is better)
Translates to: CRRGLSSSITEETKYRDCWKRLL*RRQEMA
Trigger: AGCCATCTCCTGTCTCCGTCAGAGCAGTCTCTTCCA...GCAGTCCCTGTATTTTGTCTCTTCTGTAATGGAGGAGCTGAGCCCTCTTCTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508775.6
3UTR-3UTR GCA 90 bp CATGGAGCACAGAAGCGAGTTGGACAAAGTCCGGGCCTTTGTAGTGTGACGTGGGAGACAGGAGATGGCTaGTCTGTGAATACACCCAAA +
Preference number: 2 (lower is better)
Translates to: HGAQKRVGQSPGLCSVTWETGDG*SVNTPK
Trigger: TTTGGGTGTATTCACAGAGCAGCCATCTCCTGTCTC...CCACGTCACACTACAAAGGCCCGGACTTTGTCCAACTCGCTTCTGTGCTCCATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508775.6
3UTR-3UTR GCA 90 bp CACCATAAGTTCCACTCATCCCTGTGGCCTAGTCCACGGGTCCTCTTTTCCATGCTAAATAGATACCAGTaGAGGGACCTGGCTACCCTC +
Preference number: 2 (lower is better)
Translates to: HHKFHSSLWPSPRVLFSMLNRYQ*RDLATL
Trigger: GAGGGTAGCCAGGTCCCTGCACTGGTATCTATTTAG...CATGGAAAAGAGGACCCGTGGACTAGGCCACAGGGATGAGTGGAACTTATGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508775.6
3UTR-3UTR GCA 90 bp TGCAGAAGAGGGCTCAGCTCCTCCATTACAGAAGAGACAAAATACAGGGACTGCTGCACAGCCCCCAGATaGCTCACTCCACGAGTGAAA +
Preference number: 2 (lower is better)
Translates to: CRRGLSSSITEETKYRDCCTAPR*LTPRVK
Trigger: TTTCACTCGTGGAGTGAGGCATCTGGGGGCTGTGCA...GCAGTCCCTGTATTTTGTCTCTTCTGTAATGGAGGAGCTGAGCCCTCTTCTGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000508775.6
3UTR-3UTR GCA 90 bp TGCAGAAGAGGGCTCAGCTCCTCCATTACAGAAGAGACAAAATACAGGGACTGCCTCACTCTGTCTGTCTaGAGAAGCTGTCAGGCCTGG +
Preference number: 2 (lower is better)
Translates to: CRRGLSSSITEETKYRDCLTLSV*RSCQAW
Trigger: CCAGGCCTGACAGCTTCTGCAGACAGACAGAGTGAG...GCAGTCCCTGTATTTTGTCTCTTCTGTAATGGAGGAGCTGAGCCCTCTTCTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508775.6
3UTR-3UTR CCA 90 bp CACCATAAGTTCCACTCATCCCTGTGGCCTAGTCCACGGGTCCTCTTTTCCATGACAGCGAGAACCGTGTaGTCAGAGTTGCATCTTCCT +
Preference number: 2 (lower is better)
Translates to: HHKFHSSLWPSPRVLFSMTARTV*SELHLP
Trigger: AGGAAGATGCAACTCTGACCACACGGTTCTCGCTGT...CATGGAAAAGAGGACCCGTGGACTAGGCCACAGGGATGAGTGGAACTTATGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508775.6
3UTR CAA 90 bp CTCAGTCACCTCCGCCCAGTTACAGCGAGAACCGTGTGGTCAGAGTaGCATCTTCCTGAGTTGAATCTGGAAAATGCACGACCTACTTGT +
Preference number: 2 (lower is better)
Translates to: LSHLRPVTARTVWSE*HLPELNLENARPTC
Trigger: ACAAGTAGGTCGTGCATTTTCCAGATTCAACTCAGGAAGATGCAACTCTGACCACACGGTTCTCGCTGTAACTGGGCGGAGGTGACTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508775.6
3UTR-3UTR TCA 90 bp GACACACTCAAAAAGCGCGGTGATCTGAGTTATAGTAAAGCCTGTTTCGTTGGTGGCTGCTCTCCATCCTaGGATGCGCCTGCTCCTTTG +
Preference number: 2 (lower is better)
Translates to: DTLKKRGDLSYSKACFVGGCSPS*DAPAPL
Trigger: CAAAGGAGCAGGCGCATCTCAGGATGGAGAGCAGCC...ACCAACGAAACAGGCTTTACTATAACTCAGATCACCGCGCTTTTTGAGTGTGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000508775.6
3UTR-3UTR GCA 90 bp GACACACTCAAAAAGCGCGGTGATCTGAGTTATAGTAAAGCCTGTTTCGTTGGTGCCTTCCCCACAGCTTaGAGAAGAGGGCTCAGCTCC +
Preference number: 2 (lower is better)
Translates to: DTLKKRGDLSYSKACFVGAFPTA*RRGLSS
Trigger: GGAGCTGAGCCCTCTTCTGCAAGCTGTGGGGAAGGC...ACCAACGAAACAGGCTTTACTATAACTCAGATCACCGCGCTTTTTGAGTGTGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000508775.6
3UTR-3UTR GCA 90 bp GACACACTCAAAAAGCGCGGTGATCTGAGTTATAGTAAAGCCTGTTTCGTTGGTATGGTGCCGCAGAGATaGTCCAGGCAGACGCCTGCT +
Preference number: 2 (lower is better)
Translates to: DTLKKRGDLSYSKACFVGMVPQR*SRQTPA
Trigger: AGCAGGCGTCTGCCTGGAGCATCTCTGCGGCACCAT...ACCAACGAAACAGGCTTTACTATAACTCAGATCACCGCGCTTTTTGAGTGTGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000508775.6
3UTR-3UTR GCA 90 bp GACACACTCAAAAAGCGCGGTGATCTGAGTTATAGTAAAGCCTGTTTCGTTGGTCGTCCTCACCTACACTaGACAGCCCTCACCTCTGCC +
Preference number: 2 (lower is better)
Translates to: DTLKKRGDLSYSKACFVGRPHLH*TALTSA
Trigger: GGCAGAGGTGAGGGCTGTGCAGTGTAGGTGAGGACG...ACCAACGAAACAGGCTTTACTATAACTCAGATCACCGCGCTTTTTGAGTGTGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000508775.6
3UTR-3UTR CCA 90 bp TGCAGAAGAGGGCTCAGCTCCTCCATTACAGAAGAGACAAAATACAGGGACTGCCAACAACGGAGCAGCTaGCTAAGGAACGATGTCCTG +
Preference number: 2 (lower is better)
Translates to: CRRGLSSSITEETKYRDCQQRSS*LRNDVL
Trigger: CAGGACATCGTTCCTTAGCCAGCTGCTCCGTTGTTG...GCAGTCCCTGTATTTTGTCTCTTCTGTAATGGAGGAGCTGAGCCCTCTTCTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508775.6
3UTR-3UTR CCA 90 bp GACACACTCAAAAAGCGCGGTGATCTGAGTTATAGTAAAGCCTGTTTCGTTGGTCCTGAGCCGCCATACTaGGGAGGTGTGATCTGGGAG +
Preference number: 2 (lower is better)
Translates to: DTLKKRGDLSYSKACFVGPEPPY*GGVIWE
Trigger: CTCCCAGATCACACCTCCCCAGTATGGCGGCTCAGG...ACCAACGAAACAGGCTTTACTATAACTCAGATCACCGCGCTTTTTGAGTGTGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000508775.6
3UTR-3UTR TCA 90 bp CACCATAAGTTCCACTCATCCCTGTGGCCTAGTCCACGGGTCCTCTTTTCCATGTCTGATCTCCATCACTaGACCTTAAACGCAGAGTCT +
Preference number: 2 (lower is better)
Translates to: HHKFHSSLWPSPRVLFSMSDLHH*TLNAES
Trigger: AGACTCTGCGTTTAAGGTTCAGTGATGGAGATCAGA...CATGGAAAAGAGGACCCGTGGACTAGGCCACAGGGATGAGTGGAACTTATGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508775.6
3UTR-3UTR TCA 90 bp CATGGAGCACAGAAGCGAGTTGGACAAAGTCCGGGCCTTTGTAGTGTGACGTGGAGAGTTGCATCTTCCTaGGTTGAATCTGGAAAATGC +
Preference number: 2 (lower is better)
Translates to: HGAQKRVGQSPGLCSVTWRVASS*VESGKC
Trigger: GCATTTTCCAGATTCAACTCAGGAAGATGCAACTCT...CCACGTCACACTACAAAGGCCCGGACTTTGTCCAACTCGCTTCTGTGCTCCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508775.6
3UTR-3UTR GCA 90 bp CATGGAGCACAGAAGCGAGTTGGACAAAGTCCGGGCCTTTGTAGTGTGACGTGGACAAAATACAGGGACTaGTTCCATCAAATCCCCCAT +
Preference number: 2 (lower is better)
Translates to: HGAQKRVGQSPGLCSVTWTKYRD*FHQIPH
Trigger: ATGGGGGATTTGATGGAAGCAGTCCCTGTATTTTGT...CCACGTCACACTACAAAGGCCCGGACTTTGTCCAACTCGCTTCTGTGCTCCATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000508775.6
3UTR-3UTR CCA 90 bp TGTGATTGTATCCTGGTAATTTCATTTCAGGAGCTAGAGCTTGTGAGGAAAAGTGAAGAGAAGAGGCCCTaGTCCCTGGGCGTGGAGGCG +
Preference number: 2 (lower is better)
Translates to: CDCILVISFQELELVRKSEEKRP*SLGVEA
Trigger: CGCCTCCACGCCCAGGGACCAGGGCCTCTTCTCTTC...ACTTTTCCTCACAAGCTCTAGCTCCTGAAATGAAATTACCAGGATACAATCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508775.6
3UTR CAA 90 bp GACAGGTACCAACCACCAAAGCTGTACACGCCAGGTTCAATGTCTTaGCTGGTAAAAATGGGCCACTGTCACTCTGCAGACTTTTCTCAG +
Preference number: 2 (lower is better)
Translates to: DRYQPPKLYTPGSMS*LVKMGHCHSADFSQ
Trigger: CTGAGAAAAGTCTGCAGAGTGACAGTGGCCCATTTTTACCAGCAAAGACATTGAACCTGGCGTGTACAGCTTTGGTGGTTGGTACCTGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000508775.6
3UTR-3UTR TCA 90 bp TGTGATTGTATCCTGGTAATTTCATTTCAGGAGCTAGAGCTTGTGAGGAAAAGTCAGGGCAGGAGGGATTaGGGGAATGTCCCTGAGCCG +
Preference number: 2 (lower is better)
Translates to: CDCILVISFQELELVRKSQGRRD*GNVPEP
Trigger: CGGCTCAGGGACATTCCCTCAATCCCTCCTGCCCTG...ACTTTTCCTCACAAGCTCTAGCTCCTGAAATGAAATTACCAGGATACAATCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508775.6
3UTR-3UTR GCA 90 bp TCGAGTCATGAAAAGACACTGGAGGAACTGCAAACATACATTGCTAAGTGCAAGGCGGCGCAGGTCCCATaGTTTTCCCACTCATGCTTC +
Preference number: 2 (lower is better)
Translates to: SSHEKTLEELQTYIAKCKAAQVP*FSHSCF
Trigger: GAAGCATGAGTGGGAAAAGCATGGGACCTGCGCCGC...CTTGCACTTAGCAATGTATGTTTGCAGTTCCTCCAGTGTCTTTTCATGACTCGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421787.5
3UTR-3UTR CCA 90 bp GACACACTCAAAAAGCGCGGTGATCTGAGTTATAGTAAAGCCTGTTTCGTTGGTGTGGCAGTCAATGCATaGCCCAGATGGGAGACTGAG +
Preference number: 2 (lower is better)
Translates to: DTLKKRGDLSYSKACFVGVAVNA*PRWETE
Trigger: CTCAGTCTCCCATCTGGGCCATGCATTGACTGCCAC...ACCAACGAAACAGGCTTTACTATAACTCAGATCACCGCGCTTTTTGAGTGTGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000508775.6
3UTR-3UTR TCA 90 bp TGCAGAAGAGGGCTCAGCTCCTCCATTACAGAAGAGACAAAATACAGGGACTGCGTAGACACCATGAAGTaGGGTTTTGGTTTGAGCCAA +
Preference number: 2 (lower is better)
Translates to: CRRGLSSSITEETKYRDCVDTMK*GFGLSQ
Trigger: TTGGCTCAAACCAAAACCTCACTTCATGGTGTCTAC...GCAGTCCCTGTATTTTGTCTCTTCTGTAATGGAGGAGCTGAGCCCTCTTCTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508775.6
3UTR-3UTR TCA 90 bp TGTGATTGTATCCTGGTAATTTCATTTCAGGAGCTAGAGCTTGTGAGGAAAAGTCCACACATACGAGCCTaGGACCCCGCTCACATGGGA +
Preference number: 2 (lower is better)
Translates to: CDCILVISFQELELVRKSPHIRA*DPAHMG
Trigger: TCCCATGTGAGCGGGGTCTCAGGCTCGTATGTGTGG...ACTTTTCCTCACAAGCTCTAGCTCCTGAAATGAAATTACCAGGATACAATCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508775.6
3UTR-3UTR TCA 90 bp GACACACTCAAAAAGCGCGGTGATCTGAGTTATAGTAAAGCCTGTTTCGTTGGTGGATTGCTTTCCAGGTaGCAAAGCATTGTCCCCTCC +
Preference number: 2 (lower is better)
Translates to: DTLKKRGDLSYSKACFVGGLLSR*QSIVPS
Trigger: GGAGGGGACAATGCTTTGTCACCTGGAAAGCAATCC...ACCAACGAAACAGGCTTTACTATAACTCAGATCACCGCGCTTTTTGAGTGTGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000508775.6
3UTR-3UTR TCA 90 bp TGTGATTGTATCCTGGTAATTTCATTTCAGGAGCTAGAGCTTGTGAGGAAAAGTTTGAGGGAATGTCCCTaGGCCGCCATACTGGGGAGG +
Preference number: 2 (lower is better)
Translates to: CDCILVISFQELELVRKSLRECP*AAILGR
Trigger: CCTCCCCAGTATGGCGGCTCAGGGACATTCCCTCAA...ACTTTTCCTCACAAGCTCTAGCTCCTGAAATGAAATTACCAGGATACAATCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508775.6
3UTR-3UTR CCA 90 bp CGACACCTACTTTCTCACCGTCCCATCTGCCTGGTAAACCTTTGTCTCTCTCTGTCCAATTCACAGGCATaGAGGGGAAACAGCAAAATA +
Preference number: 2 (lower is better)
Translates to: RHLLSHRPICLVNLCLSLSNSQA*RGNSKI
Trigger: TATTTTGCTGTTTCCCCTCCATGCCTGTGAATTGGA...CAGAGAGAGACAAAGGTTTACCAGGCAGATGGGACGGTGAGAAAGTAGGTGTCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508775.6
3UTR-3UTR TCA 90 bp CACCATAAGTTCCACTCATCCCTGTGGCCTAGTCCACGGGTCCTCTTTTCCATGAGTGAGGTTTTGGTTTaGGCCAATTTGAAAATCTCT +
Preference number: 2 (lower is better)
Translates to: HHKFHSSLWPSPRVLFSMSEVLV*ANLKIS
Trigger: AGAGATTTTCAAATTGGCTCAAACCAAAACCTCACT...CATGGAAAAGAGGACCCGTGGACTAGGCCACAGGGATGAGTGGAACTTATGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000508775.6
3UTR-3UTR CCA 90 bp TGCAGAAGAGGGCTCAGCTCCTCCATTACAGAAGAGACAAAATACAGGGACTGCTGTCTTAACAACACATaGAAAGCTCCTCACTGCACA +
Preference number: 2 (lower is better)
Translates to: CRRGLSSSITEETKYRDCCLNNT*KAPHCT
Trigger: TGTGCAGTGAGGAGCTTTCCATGTGTTGTTAAGACA...GCAGTCCCTGTATTTTGTCTCTTCTGTAATGGAGGAGCTGAGCCCTCTTCTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508775.6
3UTR CAA 90 bp AAATGCAGGAAATCACGCCCTTCCAGGTGCAAAACAAATCAGATCTaGTCCCTCTCACAGGCATCAAAACACAAATCATCAGTTCCCGAC +
Preference number: 2 (lower is better)
Translates to: KCRKSRPSRCKTNQI*SLSQASKHKSSVPD
Trigger: GTCGGGAACTGATGATTTGTGTTTTGATGCCTGTGAGAGGGACAAGATCTGATTTGTTTTGCACCTGGAAGGGCGTGATTTCCTGCATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508775.6
3UTR-3UTR TCA 90 bp GACACACTCAAAAAGCGCGGTGATCTGAGTTATAGTAAAGCCTGTTTCGTTGGTTTGGGAGCATCTTGGTaGCTGGCTGAATCTTGTACA +
Preference number: 2 (lower is better)
Translates to: DTLKKRGDLSYSKACFVGLGASW*LAESCT
Trigger: TGTACAAGATTCAGCCAGTCACCAAGATGCTCCCAA...ACCAACGAAACAGGCTTTACTATAACTCAGATCACCGCGCTTTTTGAGTGTGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000508775.6
3UTR-3UTR CCA 90 bp TGTGATTGTATCCTGGTAATTTCATTTCAGGAGCTAGAGCTTGTGAGGAAAAGTGCACTGACAGTCAGGTaGCGTGGCAGTCAATGCATG +
Preference number: 2 (lower is better)
Translates to: CDCILVISFQELELVRKSALTVR*RGSQCM
Trigger: CATGCATTGACTGCCACGCCACCTGACTGTCAGTGC...ACTTTTCCTCACAAGCTCTAGCTCCTGAAATGAAATTACCAGGATACAATCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508775.6
3UTR-3UTR GCA 90 bp TGTGATTGTATCCTGGTAATTTCATTTCAGGAGCTAGAGCTTGTGAGGAAAAGTTGCCTCAGACACAGGTaGACTCATGGAGCACAGAAG +
Preference number: 2 (lower is better)
Translates to: CDCILVISFQELELVRKSCLRHR*THGAQK
Trigger: CTTCTGTGCTCCATGAGTGCACCTGTGTCTGAGGCA...ACTTTTCCTCACAAGCTCTAGCTCCTGAAATGAAATTACCAGGATACAATCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508775.6
3UTR-3UTR GCA 90 bp TGTGATTGTATCCTGGTAATTTCATTTCAGGAGCTAGAGCTTGTGAGGAAAAGTAGGTGCCCGCCACCATaGCCGGCCAATTTTTGTATT +
Preference number: 2 (lower is better)
Translates to: CDCILVISFQELELVRKSRCPPP*PANFCI
Trigger: AATACAAAAATTGGCCGGGCATGGTGGCGGGCACCT...ACTTTTCCTCACAAGCTCTAGCTCCTGAAATGAAATTACCAGGATACAATCACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000508775.6
3UTR-3UTR GCA 90 bp TGTGATTGTATCCTGGTAATTTCATTTCAGGAGCTAGAGCTTGTGAGGAAAAGTAGTGATTCATTCTCCTaGCTCAGCCTCCCGAGTAGC +
Preference number: 2 (lower is better)
Translates to: CDCILVISFQELELVRKSSDSFS*LSLPSS
Trigger: GCTACTCGGGAGGCTGAGGCAGGAGAATGAATCACT...ACTTTTCCTCACAAGCTCTAGCTCCTGAAATGAAATTACCAGGATACAATCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508775.6
3UTR-3UTR GCA 90 bp GACACACTCAAAAAGCGCGGTGATCTGAGTTATAGTAAAGCCTGTTTCGTTGGTAGAGTCTTACTCTGTTaGCCAAGCTTGAGTACAGTC +
Preference number: 2 (lower is better)
Translates to: DTLKKRGDLSYSKACFVGRVLLC*PSLSTV
Trigger: GACTGTACTCAAGCTTGGGCAACAGAGTAAGACTCT...ACCAACGAAACAGGCTTTACTATAACTCAGATCACCGCGCTTTTTGAGTGTGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000508775.6
3UTR-3UTR CCA 90 bp TGTGATTGTATCCTGGTAATTTCATTTCAGGAGCTAGAGCTTGTGAGGAAAAGTATTAGCCGGGCATGGTaGCATATGCCACCACTCTTG +
Preference number: 2 (lower is better)
Translates to: CDCILVISFQELELVRKSISRAW*HMPPLL
Trigger: CAAGAGTGGTGGCATATGCCACCATGCCCGGCTAAT...ACTTTTCCTCACAAGCTCTAGCTCCTGAAATGAAATTACCAGGATACAATCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508775.6
3UTR-3UTR TCA 90 bp GACACACTCAAAAAGCGCGGTGATCTGAGTTATAGTAAAGCCTGTTTCGTTGGTTATACTTACATGATCTaGGGCAGGTTATCAAACGCT +
Preference number: 2 (lower is better)
Translates to: DTLKKRGDLSYSKACFVGYTYMI*GRLSNA
Trigger: AGCGTTTGATAACCTGCCTCAGATCATGTAAGTATA...ACCAACGAAACAGGCTTTACTATAACTCAGATCACCGCGCTTTTTGAGTGTGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000508775.6
3UTR-3UTR GCA 90 bp TGTGATTGTATCCTGGTAATTTCATTTCAGGAGCTAGAGCTTGTGAGGAAAAGTAATTCCAAGTATGCCTaGCTGATCTACCAGGGCACT +
Preference number: 2 (lower is better)
Translates to: CDCILVISFQELELVRKSNSKYA*LIYQGT
Trigger: AGTGCCCTGGTAGATCAGGCAGGCATACTTGGAATT...ACTTTTCCTCACAAGCTCTAGCTCCTGAAATGAAATTACCAGGATACAATCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508775.6
3UTR-3UTR GCA 90 bp TGTGATTGTATCCTGGTAATTTCATTTCAGGAGCTAGAGCTTGTGAGGAAAAGTCTTGGAGAGAGGGATTaGTTTCCAGGTGACAAAGCA +
Preference number: 2 (lower is better)
Translates to: CDCILVISFQELELVRKSLGERD*FPGDKA
Trigger: TGCTTTGTCACCTGGAAAGCAATCCCTCTCTCCAAG...ACTTTTCCTCACAAGCTCTAGCTCCTGAAATGAAATTACCAGGATACAATCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508775.6
3UTR-3UTR CCA 90 bp TGTGATTGTATCCTGGTAATTTCATTTCAGGAGCTAGAGCTTGTGAGGAAAAGTCCTGTGCCATCCAGCTaGCATCTTCTATGTAACACA +
Preference number: 2 (lower is better)
Translates to: CDCILVISFQELELVRKSPVPSS*HLLCNT
Trigger: TGTGTTACATAGAAGATGCCAGCTGGATGGCACAGG...ACTTTTCCTCACAAGCTCTAGCTCCTGAAATGAAATTACCAGGATACAATCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508775.6
3UTR-3UTR TCA 90 bp TGTGATTGTATCCTGGTAATTTCATTTCAGGAGCTAGAGCTTGTGAGGAAAAGTATAAAACCCAAGCCTTaGTCCCTGTGTTCGCAAAAT +
Preference number: 2 (lower is better)
Translates to: CDCILVISFQELELVRKSIKPKP*SLCSQN
Trigger: ATTTTGCGAACACAGGGATCAAGGCTTGGGTTTTAT...ACTTTTCCTCACAAGCTCTAGCTCCTGAAATGAAATTACCAGGATACAATCACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000508775.6
3UTR-3UTR GCA 90 bp TGTGATTGTATCCTGGTAATTTCATTTCAGGAGCTAGAGCTTGTGAGGAAAAGTAAACAAATCCTGCCCTaGCAAGCCAACAGAAAAACA +
Preference number: 2 (lower is better)
Translates to: CDCILVISFQELELVRKSKQILP*QANRKT
Trigger: TGTTTTTCTGTTGGCTTGGCAGGGCAGGATTTGTTT...ACTTTTCCTCACAAGCTCTAGCTCCTGAAATGAAATTACCAGGATACAATCACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000508775.6
3UTR-3UTR TCA 90 bp TGTGATTGTATCCTGGTAATTTCATTTCAGGAGCTAGAGCTTGTGAGGAAAAGTAAATATTTCACGTGTTaGACACAATGCCTGGCACAT +
Preference number: 2 (lower is better)
Translates to: CDCILVISFQELELVRKSKYFTC*TQCLAH
Trigger: ATGTGCCAGGCATTGTGTTCAACACGTGAAATATTT...ACTTTTCCTCACAAGCTCTAGCTCCTGAAATGAAATTACCAGGATACAATCACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508775.6
3UTR TCA 72 bp GCCGCAGAGATGCTCCAGGCAGACGCCTGCTCTGGCTaGGACCCGGGCCAGCTGCCCCTCCTGGCTGCTCTC +
Preference number: 3 (lower is better)
Translates to: AAEMLQADACSG*DPGQLPLLAAL
Trigger: GAGAGCAGCCAGGAGGGGCAGCTGGCCCGGGTCTCAGCCAGAGCAGGCGTCTGCCTGGAGCATCTCTGCGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508775.6
3UTR CCA 72 bp TGGTGCCGCAGAGATGCTCCAGGCAGACGCCTGCTCTaGCTGAGACCCGGGCCAGCTGCCCCTCCTGGCTGC +
Preference number: 3 (lower is better)
Translates to: WCRRDAPGRRLL*LRPGPAAPPGC
Trigger: GCAGCCAGGAGGGGCAGCTGGCCCGGGTCTCAGCCAGAGCAGGCGTCTGCCTGGAGCATCTCTGCGGCACCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508775.6
3UTR GCA 72 bp CCCAGGCCCACCAGGCATCAGCGTGGGCTCCTGCCATaGGTGGAGCTCTTCGTCTTGACAGGGTCCCTGCGC +
Preference number: 3 (lower is better)
Translates to: PRPTRHQRGLLP*VELFVLTGSLR
Trigger: GCGCAGGGACCCTGTCAAGACGAAGAGCTCCACGCATGGCAGGAGCCCACGCTGATGCCTGGTGGGCCTGGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508775.6
3UTR-3UTR CAA 90 bp TGCCACATTGTCCGCATCTACACTGTACGGCCCTCCCCTGTGCCATCCAGCTGGGGGGACCCTGGACCCTaGGGCTCCGCTAGCCTTCCC +
Preference number: 3 (lower is better)
Translates to: CHIVRIYTVRPSPVPSSWGDPGP*GSASLP
Trigger: GGGAAGGCTAGCGGAGCCCAAGGGTCCAGGGTCCCC...CCAGCTGGATGGCACAGGGGAGGGCCGTACAGTGTAGATGCGGACAATGTGGCA
66% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000508775.6
3UTR GCA 72 bp GGGGAGGTATGGCTCAGGGGGTTTAGGGCCAGCGGCTaGTCCAGAGCACACTGGGTGGGACTTGCTCTCCTG +
Preference number: 3 (lower is better)
Translates to: GEVWLRGFRASG*SRAHWVGLALL
Trigger: CAGGAGAGCAAGTCCCACCCAGTGTGCTCTGGAGCAGCCGCTGGCCCTAAACCCCCTGAGCCATACCTCCCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000421787.5
3UTR TCA 72 bp AGCGTGGGCTCCTGCCATGCGTGGAGCTCTTCGTCTTaGCAGGGTCCCTGCGCCAAGAAGGCAACAGGCTCC +
Preference number: 3 (lower is better)
Translates to: SVGSCHAWSSSS*QGPCAKKATGS
Trigger: GGAGCCTGTTGCCTTCTTGGCGCAGGGACCCTGTCAAGACGAAGAGCTCCACGCATGGCAGGAGCCCACGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508775.6
3UTR GCA 72 bp AGTCCACGGGTCCTCTTTTCCATGGTGCCGCAGAGATaGTCCAGGCAGACGCCTGCTCTGGCTGAGACCCGG +
Preference number: 3 (lower is better)
Translates to: SPRVLFSMVPQR*SRQTPALAETR
Trigger: CCGGGTCTCAGCCAGAGCAGGCGTCTGCCTGGAGCATCTCTGCGGCACCATGGAAAAGAGGACCCGTGGACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508775.6
3UTR GCA 72 bp CCCTGTGGCCTAGTCCACGGGTCCTCTTTTCCATGGTaGCGCAGAGATGCTCCAGGCAGACGCCTGCTCTGG +
Preference number: 3 (lower is better)
Translates to: PCGLVHGSSFPW*RRDAPGRRLLW
Trigger: CCAGAGCAGGCGTCTGCCTGGAGCATCTCTGCGGCACCATGGAAAAGAGGACCCGTGGACTAGGCCACAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508775.6
3UTR TCA 72 bp GGAGAGTGGCACAAACACGGTGCCAGCGTCCAGCACTaGCAGTCAGGTGGCGTGGCAGTCAATGCATGGCCC +
Preference number: 3 (lower is better)
Translates to: GEWHKHGASVQH*QSGGVAVNAWP
Trigger: GGGCCATGCATTGACTGCCACGCCACCTGACTGTCAGTGCTGGACGCTGGCACCGTGTTTGTGCCACTCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508775.6
3UTR GCA 72 bp GAGTTGAGCGCATCCACCTGGGCGGCGCAGGTCCCATaGTTTTCCCACTCATGCTTCCAGAAGCGGCTGCGA +
Preference number: 3 (lower is better)
Translates to: ELSASTWAAQVP*FSHSCFQKRLR
Trigger: TCGCAGCCGCTTCTGGAAGCATGAGTGGGAAAAGCATGGGACCTGCGCCGCCCAGGTGGATGCGCTCAACTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000028008.9
ENST00000421787.5
3UTR GCA 72 bp AGGCCTGGCTGGGTGCTGCCTGTCTCAGGCTCTTACTaGAGAGCTTGTTTCCAGAGGGCCAGAGGCCGTCCT +
Preference number: 3 (lower is better)
Translates to: RPGWVLPVSGSY*RACFQRARGRP
Trigger: AGGACGGCCTCTGGCCCTCTGGAAACAAGCTCTGCAGTAAGAGCCTGAGACAGGCAGCACCCAGCCAGGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508775.6
3UTR GCA 72 bp CAGGCATCACCCTTGCTGTCCAGCCGACACCTACGATaGGCAGTCCATGTCTCCGCTGCCCAGGCCTCATCT +
Preference number: 3 (lower is better)
Translates to: QASPLLSSRHLR*AVHVSAAQASS
Trigger: AGATGAGGCCTGGGCAGCGGAGACATGGACTGCGCATCGTAGGTGTCGGCTGGACAGCAAGGGTGATGCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508775.6
3UTR CCA 72 bp CCGAGGGACAATGACAAGGTGGGGACCCTGGACCCTTaGGCTCCGCTAGCCTTCCCCACAGCTTGCAGAAGA +
Preference number: 3 (lower is better)
Translates to: PRDNDKVGTLDP*APLAFPTACRR
Trigger: TCTTCTGCAAGCTGTGGGGAAGGCTAGCGGAGCCCAAGGGTCCAGGGTCCCCACCTTGTCATTGTCCCTCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508775.6
3UTR CCA 72 bp CATCCCTGTGGCCTAGTCCACGGGTCCTCTTTTCCATaGTGCCGCAGAGATGCTCCAGGCAGACGCCTGCTC +
Preference number: 3 (lower is better)
Translates to: HPCGLVHGSSFP*CRRDAPGRRLL
Trigger: GAGCAGGCGTCTGCCTGGAGCATCTCTGCGGCACCATGGAAAAGAGGACCCGTGGACTAGGCCACAGGGATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508775.6
3UTR CCA 72 bp ACGGTGCCAGCGTCCAGCACTGACAGTCAGGTGGCGTaGCAGTCAATGCATGGCCCAGATGGGAGACTGAGG +
Preference number: 3 (lower is better)
Translates to: TVPASSTDSQVA*QSMHGPDGRLR
Trigger: CCTCAGTCTCCCATCTGGGCCATGCATTGACTGCCACGCCACCTGACTGTCAGTGCTGGACGCTGGCACCGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508775.6
3UTR TCA 72 bp CAGGAGGGGCAAAGTCACCGTTCTAGGACACACCTGTaGCCACACCAGGCCTCCAACAACGGAGCAGCTGGC +
Preference number: 3 (lower is better)
Translates to: QEGQSHRSRTHL*PHQASNNGAAG
Trigger: GCCAGCTGCTCCGTTGTTGGAGGCCTGGTGTGGTCACAGGTGTGTCCTAGAACGGTGACTTTGCCCCTCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508775.6
3UTR TCA 72 bp CTGCCAACAGGGCAGGAGGGATTGAGGGAATGTCCCTaGGCCGCCATACTGGGGAGGTGTGATCTGGGAGCA +
Preference number: 3 (lower is better)
Translates to: LPTGQEGLRECP*AAILGRCDLGA
Trigger: TGCTCCCAGATCACACCTCCCCAGTATGGCGGCTCAGGGACATTCCCTCAATCCCTCCTGCCCTGTTGGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508775.6
3UTR GCA 72 bp AGCCATGGTTGGTTACGGAGAGTGGCACAAACACGGTaGCAGCGTCCAGCACTGACAGTCAGGTGGCGTGGC +
Preference number: 3 (lower is better)
Translates to: SHGWLRRVAQTR*QRPALTVRWRG
Trigger: GCCACGCCACCTGACTGTCAGTGCTGGACGCTGGCACCGTGTTTGTGCCACTCTCCGTAACCAACCATGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508775.6
3UTR CCA 72 bp GGTTTAGGGCCAGCGGCTGCTCCAGAGCACACTGGGTaGGACTTGCTCTCCTGCATTTGTCCAAAGCCGCAC +
Preference number: 3 (lower is better)
Translates to: GLGPAAAPEHTG*DLLSCICPKPH
Trigger: GTGCGGCTTTGGACAAATGCAGGAGAGCAAGTCCCACCCAGTGTGCTCTGGAGCAGCCGCTGGCCCTAAACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421787.5
3UTR CCA 72 bp AGGGGGTTTAGGGCCAGCGGCTGCTCCAGAGCACACTaGGTGGGACTTGCTCTCCTGCATTTGTCCAAAGCC +
Preference number: 3 (lower is better)
Translates to: RGFRASGCSRAH*VGLALLHLSKA
Trigger: GGCTTTGGACAAATGCAGGAGAGCAAGTCCCACCCAGTGTGCTCTGGAGCAGCCGCTGGCCCTAAACCCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000421787.5
3UTR CCA 72 bp CAAACACGGTGCCAGCGTCCAGCACTGACAGTCAGGTaGCGTGGCAGTCAATGCATGGCCCAGATGGGAGAC +
Preference number: 3 (lower is better)
Translates to: QTRCQRPALTVR*RGSQCMAQMGD
Trigger: GTCTCCCATCTGGGCCATGCATTGACTGCCACGCCACCTGACTGTCAGTGCTGGACGCTGGCACCGTGTTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508775.6
3UTR TCA 72 bp GAGCCTGGCCTGCTCCTCCTTCCACACATACGAGCCTaGGACCCCGCTCACATGGGAGGCATTTCTCAGTCA +
Preference number: 3 (lower is better)
Translates to: EPGLLLLPHIRA*DPAHMGGISQS
Trigger: TGACTGAGAAATGCCTCCCATGTGAGCGGGGTCTCAGGCTCGTATGTGTGGAAGGAGGAGCAGGCCAGGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508775.6
3UTR GCA 72 bp CTGGACCCTTGGGCTCCGCTAGCCTTCCCCACAGCTTaGAGAAGAGGGCTCAGCTCCTCCATTACAGAAGAG +
Preference number: 3 (lower is better)
Translates to: LDPWAPLAFPTA*RRGLSSSITEE
Trigger: CTCTTCTGTAATGGAGGAGCTGAGCCCTCTTCTGCAAGCTGTGGGGAAGGCTAGCGGAGCCCAAGGGTCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508775.6
3UTR GCA 72 bp ACCCAGGCCTCTACCCAGTCATCTAGGCATTCTCCCTaGCGTCTAGCCCAAAACCGGAACAGCACAGCCCTC +
Preference number: 3 (lower is better)
Translates to: TQASTQSSRHSP*RLAQNRNSTAL
Trigger: GAGGGCTGTGCTGTTCCGGTTTTGGGCTAGACGGCAGGGAGAATGCCTAGATGACTGGGTAGAGGCCTGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508775.6
3UTR CCA 72 bp CCTGTGACCACACCAGGCCTCCAACAACGGAGCAGCTaGCTAAGGAACGATGTCCTGGGGCTCTGGTCACAT +
Preference number: 3 (lower is better)
Translates to: PVTTPGLQQRSS*LRNDVLGLWSH
Trigger: ATGTGACCAGAGCCCCAGGACATCGTTCCTTAGCCAGCTGCTCCGTTGTTGGAGGCCTGGTGTGGTCACAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508775.6
3UTR CCA 72 bp CCGCAGCCCATGCCTCCCACCAGGATGCTACCTTGTTaGCGTCCCCATCCGCTCTCAAATGCTCACACTCAT +
Preference number: 3 (lower is better)
Translates to: PQPMPPTRMLPC*RPHPLSNAHTH
Trigger: ATGAGTGTGAGCATTTGAGAGCGGATGGGGACGCCAACAAGGTAGCATCCTGGTGGGAGGCATGGGCTGCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508775.6
3UTR CCA 72 bp CTGGGGAGGTGTGATCTGGGAGCAGAGAGCCATGGTTaGTTACGGAGAGTGGCACAAACACGGTGCCAGCGT +
Preference number: 3 (lower is better)
Translates to: LGRCDLGAESHG*LRRVAQTRCQR
Trigger: ACGCTGGCACCGTGTTTGTGCCACTCTCCGTAACCAACCATGGCTCTCTGCTCCCAGATCACACCTCCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508775.6
3UTR-3UTR CAA 90 bp CATGGAGCACAGAAGCGAGTTGGACAAAGTCCGGGCCTTTGTAGTGTGACGTGGCAGGATGCTACCTTGTaGGCGTCCCCATCCGCTCTC +
Preference number: 3 (lower is better)
Translates to: HGAQKRVGQSPGLCSVTWQDATL*ASPSAL
Trigger: GAGAGCGGATGGGGACGCCAACAAGGTAGCATCCTG...CCACGTCACACTACAAAGGCCCGGACTTTGTCCAACTCGCTTCTGTGCTCCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508775.6
3UTR-3UTR CAA 90 bp CATGGAGCACAGAAGCGAGTTGGACAAAGTCCGGGCCTTTGTAGTGTGACGTGGTTCCCTTGCCGTCTGTaGCCCTGCACTTTGGGAGGC +
Preference number: 3 (lower is better)
Translates to: HGAQKRVGQSPGLCSVTWFPCRL*PCTLGG
Trigger: GCCTCCCAAAGTGCAGGGCAACAGACGGCAAGGGAA...CCACGTCACACTACAAAGGCCCGGACTTTGTCCAACTCGCTTCTGTGCTCCATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508775.6
3UTR GCA 72 bp AACACATGGAAAGCTCCTCACTGCACAGCCCCCAGATaGCTCACTCCACGAGTGAAATCCCTGCACGGCAGG +
Preference number: 3 (lower is better)
Translates to: NTWKAPHCTAPR*LTPRVKSLHGR
Trigger: CCTGCCGTGCAGGGATTTCACTCGTGGAGTGAGGCATCTGGGGGCTGTGCAGTGAGGAGCTTTCCATGTGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000508775.6
3UTR TCA 72 bp AACAGGCGATCTGCATGTTTCCTCATCTGGGCGTGGTaGGAAGCCAACAGCAGGCACCTTCCACTGGGACCA +
Preference number: 3 (lower is better)
Translates to: NRRSACFLIWAW*EANSRHLPLGP
Trigger: TGGTCCCAGTGGAAGGTGCCTGCTGTTGGCTTCTCACCACGCCCAGATGAGGAAACATGCAGATCGCCTGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508775.6
3UTR GCA 72 bp ATGCAGCCACTGTCTCTGCTGTCCAGTCCTCACCTATaGCACATTGTCCGCATCTACACTGTACGGCCCTCC +
Preference number: 3 (lower is better)
Translates to: MQPLSLLSSPHL*HIVRIYTVRPS
Trigger: GGAGGGCCGTACAGTGTAGATGCGGACAATGTGGCATAGGTGAGGACTGGACAGCAGAGACAGTGGCTGCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508775.6
3UTR CCA 72 bp GAGCTTTATCCCAAGCACAAAACAGCCACTCAGGCGTaGGAGAGCTCCTTTCTCCCCGTGTACGCCACATGC +
Preference number: 3 (lower is better)
Translates to: ELYPKHKTATQA*ESSFLPVYATC
Trigger: GCATGTGGCGTACACGGGGAGAAAGGAGCTCTCCCACGCCTGAGTGGCTGTTTTGTGCTTGGGATAAAGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508775.6
3UTR CCA 72 bp TCCTTCCACACATACGAGCCTGAGACCCCGCTCACATaGGAGGCATTTCTCAGTCACCTCCGCCCAGTTACA +
Preference number: 3 (lower is better)
Translates to: SFHTYEPETPLT*EAFLSHLRPVT
Trigger: TGTAACTGGGCGGAGGTGACTGAGAAATGCCTCCCATGTGAGCGGGGTCTCAGGCTCGTATGTGTGGAAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508775.6
3UTR CCA 72 bp CGAGTTGGACAAAGTCCGGGCCTTTGTAGTGTGACGTaGCCATTAGGGCCCACAGATCCTTCCCTGCAGTTG +
Preference number: 3 (lower is better)
Translates to: RVGQSPGLCSVT*PLGPTDPSLQL
Trigger: CAACTGCAGGGAAGGATCTGTGGGCCCTAATGGCCACGTCACACTACAAAGGCCCGGACTTTGTCCAACTCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508775.6
3UTR-3UTR CAA 90 bp CATGGAGCACAGAAGCGAGTTGGACAAAGTCCGGGCCTTTGTAGTGTGACGTGGCTCTTACTGCAGAGCTaGTTTCCAGAGGGCCAGAGG +
Preference number: 3 (lower is better)
Translates to: HGAQKRVGQSPGLCSVTWLLLQS*FPEGQR
Trigger: CCTCTGGCCCTCTGGAAACAAGCTCTGCAGTAAGAG...CCACGTCACACTACAAAGGCCCGGACTTTGTCCAACTCGCTTCTGTGCTCCATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508775.6
3UTR GCA 72 bp GCTGCTCCAGAGCACACTGGGTGGGACTTGCTCTCCTaGATTTGTCCAAAGCCGCACAACACAGGAGTAAAC +
Preference number: 3 (lower is better)
Translates to: AAPEHTGWDLLS*ICPKPHNTGVN
Trigger: GTTTACTCCTGTGTTGTGCGGCTTTGGACAAATGCAGGAGAGCAAGTCCCACCCAGTGTGCTCTGGAGCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421787.5
3UTR GCA 72 bp GCGTGGGAGAGCTCCTTTCTCCCCGTGTACGCCACATaGACTCACTCTACAGGGACCACAACATCCAATTCA +
Preference number: 3 (lower is better)
Translates to: AWESSFLPVYAT*THSTGTTTSNS
Trigger: TGAATTGGATGTTGTGGTCCCTGTAGAGTGAGTGCATGTGGCGTACACGGGGAGAAAGGAGCTCTCCCACGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508775.6
3UTR GCA 72 bp CTCCCTCCAACCTACCAGCATCAAATGCACCAGCTATaGTCCTCTTTTCCCTTGCCGTCTGTTGCCCTGCAC +
Preference number: 3 (lower is better)
Translates to: LPPTYQHQMHQL*SSFPLPSVALH
Trigger: GTGCAGGGCAACAGACGGCAAGGGAAAAGAGGAGCATAGCTGGTGCATTTGATGCTGGTAGGTTGGAGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508775.6
3UTR TCA 72 bp GTGCAGGGACCTGGCTACCCTCTGATAAGAAGGAAGTaGGGCCTGACAGAAACTGACCTTCCAGTAACCTGG +
Preference number: 3 (lower is better)
Translates to: VQGPGYPLIRRK*GLTETDLPVTW
Trigger: CCAGGTTACTGGAAGGTCAGTTTCTGTCAGGCCTCACTTCCTTCTTATCAGAGGGTAGCCAGGTCCCTGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508775.6
3UTR GCA 72 bp AGTACTGGGGCAGCACGAGCAGCCCACATCTCAGGGTaGAGTCCAAGACATATGGTCATCAAGACAGAAGAG +
Preference number: 3 (lower is better)
Translates to: STGAARAAHISG*SPRHMVIKTEE
Trigger: CTCTTCTGTCTTGATGACCATATGTCTTGGACTGCACCCTGAGATGTGGGCTGCTCGTGCTGCCCCAGTACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508775.6
3UTR CCA 72 bp GGTGTCTTTTTCCACCATAAGTTCCACTCATCCCTGTaGCCTAGTCCACGGGTCCTCTTTTCCATGGTGCCG +
Preference number: 3 (lower is better)
Translates to: GVFFHHKFHSSL*PSPRVLFSMVP
Trigger: CGGCACCATGGAAAAGAGGACCCGTGGACTAGGCCACAGGGATGAGTGGAACTTATGGTGGAAAAAGACACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000508775.6
3UTR CCA 72 bp AAACACCTACTATGCTCAAGTAGCTGTGTTCAGTACTaGGGCAGCACGAGCAGCCCACATCTCAGGGTGCAG +
Preference number: 3 (lower is better)
Translates to: KHLLCSSSCVQY*GSTSSPHLRVQ
Trigger: CTGCACCCTGAGATGTGGGCTGCTCGTGCTGCCCCAGTACTGAACACAGCTACTTGAGCATAGTAGGTGTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508775.6
3UTR-3UTR CAA 90 bp GCTCTCCATCCTGAGATGCGCCTGCTCCTTTGTCCCCCTGGGAGACACTTGTACCTGCCTGGTAAACCTTaGTCTCTCTCTGAACATTCT +
Preference number: 3 (lower is better)
Translates to: ALHPEMRLLLCPPGRHLYLPGKP*SLSEHS
Trigger: AGAATGTTCAGAGAGAGACAAAGGTTTACCAGGCAG...GTACAAGTGTCTCCCAGGGGGACAAAGGAGCAGGCGCATCTCAGGATGGAGAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000508775.6
3UTR CCA 72 bp CTCAGTCACCTCCGCCCAGTTACAGCGAGAACCGTGTaGTCAGAGTTGCATCTTCCTGAGTTGAATCTGGAA +
Preference number: 3 (lower is better)
Translates to: LSHLRPVTARTV*SELHLPELNLE
Trigger: TTCCAGATTCAACTCAGGAAGATGCAACTCTGACCACACGGTTCTCGCTGTAACTGGGCGGAGGTGACTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508775.6
3UTR-3UTR CAA 90 bp CATGGAGCACAGAAGCGAGTTGGACAAAGTCCGGGCCTTTGTAGTGTGACGTGGACCGTGTGGTCAGAGTaGCATCTTCCTGAGTTGAAT +
Preference number: 3 (lower is better)
Translates to: HGAQKRVGQSPGLCSVTWTVWSE*HLPELN
Trigger: ATTCAACTCAGGAAGATGCAACTCTGACCACACGGT...CCACGTCACACTACAAAGGCCCGGACTTTGTCCAACTCGCTTCTGTGCTCCATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508775.6
3UTR-3UTR CAA 90 bp GACACACTCAAAAAGCGCGGTGATCTGAGTTATAGTAAAGCCTGTTTCGTTGGTCACCAGGATGCTACCTaGTTGGCGTCCCCATCCGCT +
Preference number: 3 (lower is better)
Translates to: DTLKKRGDLSYSKACFVGHQDAT*LASPSA
Trigger: AGCGGATGGGGACGCCAACAAGGTAGCATCCTGGTG...ACCAACGAAACAGGCTTTACTATAACTCAGATCACCGCGCTTTTTGAGTGTGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000508775.6
3UTR TCA 72 bp CCCTCTGATAAGAAGGAAGTGAGGCCTGACAGAAACTaGCCTTCCAGTAACCTGGAAGAGACTGCTCTGACG +
Preference number: 3 (lower is better)
Translates to: PSDKKEVRPDRN*PSSNLEETALT
Trigger: CGTCAGAGCAGTCTCTTCCAGGTTACTGGAAGGTCAGTTTCTGTCAGGCCTCACTTCCTTCTTATCAGAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508775.6
3UTR GCA 72 bp ACAGGTTGTCTTAACAACACATGGAAAGCTCCTCACTaGACAGCCCCCAGATGCCTCACTCCACGAGTGAAA +
Preference number: 3 (lower is better)
Translates to: TGCLNNTWKAPH*TAPRCLTPRVK
Trigger: TTTCACTCGTGGAGTGAGGCATCTGGGGGCTGTGCAGTGAGGAGCTTTCCATGTGTTGTTAAGACAACCTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000508775.6
3UTR GCA 72 bp ACATTGTCCGCATCTACACTGTACGGCCCTCCCCTGTaGCATCCAGCTGGCATCTTCTATGTAACACAACAA +
Preference number: 3 (lower is better)
Translates to: TLSASTLYGPPL*HPAGIFYVTQQ
Trigger: TTGTTGTGTTACATAGAAGATGCCAGCTGGATGGCACAGGGGAGGGCCGTACAGTGTAGATGCGGACAATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508775.6
3UTR GCA 72 bp AACACTGGCTTAGAGCTGATGTGCCTCAGACACAGGTaGACTCATGGAGCACAGAAGCGAGTTGGACAAAGT +
Preference number: 3 (lower is better)
Translates to: NTGLELMCLRHR*THGAQKRVGQS
Trigger: ACTTTGTCCAACTCGCTTCTGTGCTCCATGAGTGCACCTGTGTCTGAGGCACATCAGCTCTAAGCCAGTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508775.6
3UTR GCA 72 bp ACTCCATCACTAGAGAACACTGGCTTAGAGCTGATGTaGCTCAGACACAGGTGCACTCATGGAGCACAGAAG +
Preference number: 3 (lower is better)
Translates to: TPSLENTGLELM*LRHRCTHGAQK
Trigger: CTTCTGTGCTCCATGAGTGCACCTGTGTCTGAGGCACATCAGCTCTAAGCCAGTGTTCTCTAGTGATGGAGT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508775.6
3UTR CCA 72 bp CTCTTGGGTACAGCAATAGCCCTGCTGAGAAGGGGCTaGTCTGAAGGAGTTTCATGGGAACCTGGTTTTCTT +
Preference number: 3 (lower is better)
Translates to: LLGTAIALLRRG*SEGVSWEPGFL
Trigger: AAGAAAACCAGGTTCCCATGAAACTCCTTCAGACCAGCCCCTTCTCAGCAGGGCTATTGCTGTACCCAAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508775.6
3UTR CCA 72 bp ATCTACACTGTACGGCCCTCCCCTGTGCCATCCAGCTaGCATCTTCTATGTAACACAACAAGAGCTGGAAGA +
Preference number: 3 (lower is better)
Translates to: IYTVRPSPVPSS*HLLCNTTRAGR
Trigger: TCTTCCAGCTCTTGTTGTGTTACATAGAAGATGCCAGCTGGATGGCACAGGGGAGGGCCGTACAGTGTAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508775.6
3UTR TCA 72 bp CAAGACATATGGTCATCAAGACAGAAGAGCAGATGGTaGCAGGTACCAACCACCAAAGCTGTACACGCCAGG +
Preference number: 3 (lower is better)
Translates to: QDIWSSRQKSRW*QVPTTKAVHAR
Trigger: CCTGGCGTGTACAGCTTTGGTGGTTGGTACCTGTCACCATCTGCTCTTCTGTCTTGATGACCATATGTCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508775.6
3UTR GCA 72 bp CTAAAGTACACCCACTCCCTGAGGACGCAGAGCAAATaGAGGAAATCACGCCCTTCCAGGTGCAAAACAAAT +
Preference number: 3 (lower is better)
Translates to: LKYTHSLRTQSK*RKSRPSRCKTN
Trigger: ATTTGTTTTGCACCTGGAAGGGCGTGATTTCCTGCATTTGCTCTGCGTCCTCAGGGAGTGGGTGTACTTTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508775.6
3UTR CCA 72 bp GAGAAGACAATGCTAACAGGTTGTCTTAACAACACATaGAAAGCTCCTCACTGCACAGCCCCCAGATGCCTC +
Preference number: 3 (lower is better)
Translates to: EKTMLTGCLNNT*KAPHCTAPRCL
Trigger: GAGGCATCTGGGGGCTGTGCAGTGAGGAGCTTTCCATGTGTTGTTAAGACAACCTGTTAGCATTGTCTTCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000508775.6
3UTR-3UTR CAA 90 bp TCGAGTCATGAAAAGACACTGGAGGAACTGCAAACATACATTGCTAAGTGCAAGGAGATTCGCGGTTGCTaGGGGGTTCAAGGGGAGGAA +
Preference number: 3 (lower is better)
Translates to: SSHEKTLEELQTYIAKCKEIRGC*GVQGEE
Trigger: TTCCTCCCCTTGAACCCCCAAGCAACCGCGAATCTC...CTTGCACTTAGCAATGTATGTTTGCAGTTCCTCCAGTGTCTTTTCATGACTCGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000421787.5
3UTR-3UTR CAA 90 bp TGTGATTGTATCCTGGTAATTTCATTTCAGGAGCTAGAGCTTGTGAGGAAAAGTGTCCAGGCATCACCCTaGCTGTCCAGCCGACACCTA +
Preference number: 3 (lower is better)
Translates to: CDCILVISFQELELVRKSVQASP*LSSRHL
Trigger: TAGGTGTCGGCTGGACAGCAAGGGTGATGCCTGGAC...ACTTTTCCTCACAAGCTCTAGCTCCTGAAATGAAATTACCAGGATACAATCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508775.6
3UTR-3UTR CAA 90 bp GACACACTCAAAAAGCGCGGTGATCTGAGTTATAGTAAAGCCTGTTTCGTTGGTCCAGGTTCAATGTCTTaGCTGGTAAAAATGGGCCAC +
Preference number: 3 (lower is better)
Translates to: DTLKKRGDLSYSKACFVGPGSMS*LVKMGH
Trigger: GTGGCCCATTTTTACCAGCAAAGACATTGAACCTGG...ACCAACGAAACAGGCTTTACTATAACTCAGATCACCGCGCTTTTTGAGTGTGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000508775.6
3UTR TCA 72 bp CTGTCTCCTGCGGCTCATAAGTGCCTTATACTTACATaGTCTGAGGCAGGTTATCAAACGCTCATGTTCTAC +
Preference number: 3 (lower is better)
Translates to: LSPAAHKCLILT*SEAGYQTLMFY
Trigger: GTAGAACATGAGCGTTTGATAACCTGCCTCAGATCATGTAAGTATAAGGCACTTATGAGCCGCAGGAGACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508775.6
3UTR TCA 72 bp TACAGCGAGAACCGTGTGGTCAGAGTTGCATCTTCCTaGGTTGAATCTGGAAAATGCACGACCTACTTGTTT +
Preference number: 3 (lower is better)
Translates to: YSENRVVRVASS*VESGKCTTYLF
Trigger: AAACAAGTAGGTCGTGCATTTTCCAGATTCAACTCAGGAAGATGCAACTCTGACCACACGGTTCTCGCTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508775.6
3UTR TCA 72 bp TTCACTTTGAGGTTTCTACCTGGAATAAGCGGATGGTaGTGTCATTCACCGAGATGGAGGCAAAAGTTTCGG +
Preference number: 3 (lower is better)
Translates to: FTLRFLPGISGW*CHSPRWRQKFR
Trigger: CCGAAACTTTTGCCTCCATCTCGGTGAATGACATCACCATCCGCTTATTCCAGGTAGAAACCTCAAAGTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508775.6
3UTR GCA 72 bp ATGAGCCGTCGAGTCATGAAAAGACACTGGAGGAACTaGAAACATACATTGCTAAGTGCAAGAAGCCAGTCT +
Preference number: 3 (lower is better)
Translates to: MSRRVMKRHWRN*KHTLLSARSQS
Trigger: AGACTGGCTTCTTGCACTTAGCAATGTATGTTTGCAGTTCCTCCAGTGTCTTTTCATGACTCGACGGCTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421787.5
3UTR GCA 72 bp AGCTCCTCCATTACAGAAGAGACAAAATACAGGGACTaGTTCCATCAAATCCCCCATCATCTCACTCTGTCT +
Preference number: 3 (lower is better)
Translates to: SSSITEETKYRD*FHQIPHHLTLS
Trigger: AGACAGAGTGAGATGATGGGGGATTTGATGGAAGCAGTCCCTGTATTTTGTCTCTTCTGTAATGGAGGAGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000508775.6
3UTR GCA 72 bp AAACACAAATCATCAGTTCCCGACAGAAACAAATCCTaGCCTGCCAAGCCAACAGAAAAACACTGGAGACAG +
Preference number: 3 (lower is better)
Translates to: KHKSSVPDRNKS*PAKPTEKHWRQ
Trigger: CTGTCTCCAGTGTTTTTCTGTTGGCTTGGCAGGGCAGGATTTGTTTCTGTCGGGAACTGATGATTTGTGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000508775.6
3UTR TCA 72 bp GATTACTCACTGACACACTCAAAAAGCGCGGTGATCTaGGTTATAGTAAAGCCTGTTTCGTTGGTGTTTGCC +
Preference number: 3 (lower is better)
Translates to: DYSLTHSKSAVI*VIVKPVSLVFA
Trigger: GGCAAACACCAACGAAACAGGCTTTACTATAACTCAGATCACCGCGCTTTTTGAGTGTGTCAGTGAGTAATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000508775.6
3UTR GCA 72 bp GATGCTACCTTGTTGGCGTCCCCATCCGCTCTCAAATaGTCACACTCATATAATAAATACACGCTACTTAAA +
Preference number: 3 (lower is better)
Translates to: DATLLASPSALK*SHSYNKYTLLK
Trigger: TTTAAGTAGCGTGTATTTATTATATGAGTGTGAGCATTTGAGAGCGGATGGGGACGCCAACAAGGTAGCATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508775.6
3UTR GCA 72 bp CCCTTCTATGGGAAACGTAGCTCATCCCATAAGCAATaGAATGGACTTCTTTTCTATAGACGCCCAAATACT +
Preference number: 3 (lower is better)
Translates to: PFYGKRSSSHKQ*NGLLFYRRPNT
Trigger: AGTATTTGGGCGTCTATAGAAAAGAAGTCCATTGCATTGCTTATGGGATGAGCTACGTTTCCCATAGAAGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508775.6
3UTR CCA 72 bp CAAAAACCAATGAGCCGTCGAGTCATGAAAAGACACTaGAGGAACTGCAAACATACATTGCTAAGTGCAAGA +
Preference number: 3 (lower is better)
Translates to: QKPMSRRVMKRH*RNCKHTLLSAR
Trigger: TCTTGCACTTAGCAATGTATGTTTGCAGTTCCTCCAGTGTCTTTTCATGACTCGACGGCTCATTGGTTTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000421787.5
3UTR CCA 72 bp TTTTATTCATTTATTCACTCCATCACTAGAGAACACTaGCTTAGAGCTGATGTGCCTCAGACACAGGTGCAC +
Preference number: 3 (lower is better)
Translates to: FYSFIHSITREH*LRADVPQTQVH
Trigger: GTGCACCTGTGTCTGAGGCACATCAGCTCTAAGCCAGTGTTCTCTAGTGATGGAGTGAATAAATGAATAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508775.6
3UTR TCA 72 bp TCTGCAGAGGCTACATACTGTATGATTCCAACGACGTaGCAATTTGGAAAAGGTAGTCTTAAGAGACAGGAA +
Preference number: 3 (lower is better)
Translates to: SAEATYCMIPTT*QFGKGSLKRQE
Trigger: TTCCTGTCTCTTAAGACTACCTTTTCCAAATTGTCACGTCGTTGGAATCATACAGTATGTAGCCTCTGCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421787.5
3UTR TCA 72 bp CTGAATAGAGTCCACTCAAATGTCTCTTCCCATGGCTaGGTCTATTCTGCTCTAAAACATTCAGAGAAAAAC +
Preference number: 3 (lower is better)
Translates to: LNRVHSNVSSHG*VYSALKHSEKN
Trigger: GTTTTTCTCTGAATGTTTTAGAGCAGAATAGACTCAGCCATGGGAAGAGACATTTGAGTGGACTCTATTCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000508775.6
3UTR GCA 72 bp GATCTGAGTTATAGTAAAGCCTGTTTCGTTGGTGTTTaGCTGATAATATCTTACACCTCATCTCTCATCATC +
Preference number: 3 (lower is better)
Translates to: DLSYSKACFVGV*LIISYTSSLII
Trigger: GATGATGAGAGATGAGGTGTAAGATATTATCAGGCAAACACCAACGAAACAGGCTTTACTATAACTCAGATC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508775.6
3UTR TCA 72 bp TTTTCTATAGACGCCCAAATACTGACTTCATATCTGTaGTTGTATCCTGGTAATTTCATTTCAGGAGCTAGA +
Preference number: 3 (lower is better)
Translates to: FSIDAQILTSYL*LYPGNFISGAR
Trigger: TCTAGCTCCTGAAATGAAATTACCAGGATACAATCACAGATATGAAGTCAGTATTTGGGCGTCTATAGAAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508775.6
CDS-3UTR TCA 90 bp TCCCAAGCACAAAACAGCCACTCAGGCGTGGGAGAGCTCCTTTCTCCCCGTGTAGACGCCTGCTCTGGCTaGGACCCGGGCCAGCTGCCC +
Preference number: 4 (lower is better)
Translates to: SQAQNSHSGVGELLSPRVDACSG*DPGQLP
Trigger: GGGCAGCTGGCCCGGGTCTCAGCCAGAGCAGGCGTC...TACACGGGGAGAAAGGAGCTCTCCCACGCCTGAGTGGCTGTTTTGTGCTTGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508775.6
CDS-3UTR GCA 90 bp GAGAGCTCCTTTCTCCCCGTGTACGCCACATGCACTCACTCTACAGGGACCACACCAGCTCCTCCACGCTaGAGCCGCCGTCCGCCCACG +
Preference number: 4 (lower is better)
Translates to: ESSFLPVYATCTHSTGTTPAPPR*SRRPPT
Trigger: CGTGGGCGGACGGCGGCTGCAGCGTGGAGGAGCTGG...TGTGGTCCCTGTAGAGTGAGTGCATGTGGCGTACACGGGGAGAAAGGAGCTCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508775.6
CDS-3UTR CCA 90 bp TGCCACATTGTCCGCATCTACACTGTACGGCCCTCCCCTGTGCCATCCAGCTGGGGCAGACGCCTGCTCTaGCTGAGACCCGGGCCAGCT +
Preference number: 4 (lower is better)
Translates to: CHIVRIYTVRPSPVPSSWGRRLL*LRPGPA
Trigger: AGCTGGCCCGGGTCTCAGCCAGAGCAGGCGTCTGCC...CCAGCTGGATGGCACAGGGGAGGGCCGTACAGTGTAGATGCGGACAATGTGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508775.6
CDS-3UTR GCA 90 bp CGGCTGCTCCAGAGCACACTGGGTGGGACTTGCTCTCCTGCATTTGTCCAAAGCGCACGTCCCGGGCTCTaGTTCGCGACCCACAGCGAC +
Preference number: 4 (lower is better)
Translates to: RLLQSTLGGTCSPAFVQSARPGL*FATHSD
Trigger: GTCGCTGTGGGTCGCGAAGCAGAGCCCGGGACGTGC...GCTTTGGACAAATGCAGGAGAGCAAGTCCCACCCAGTGTGCTCTGGAGCAGCCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421787.5
CDS-3UTR CCA 90 bp CTCCAACAACGGAGCAGCTGGCTAAGGAACGATGTCCTGGGGCTCTGGTCACATAGAGGCCCTGGTCCCTaGGCGTGGAGGCGCAGAGCC +
Preference number: 4 (lower is better)
Translates to: LQQRSSWLRNDVLGLWSHRGPGP*AWRRRA
Trigger: GGCTCTGCGCCTCCACGCCCAGGGACCAGGGCCTCT...ATGTGACCAGAGCCCCAGGACATCGTTCCTTAGCCAGCTGCTCCGTTGTTGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508775.6
CDS-3UTR GCA 90 bp CGGCTGCTCCAGAGCACACTGGGTGGGACTTGCTCTCCTGCATTTGTCCAAAGCGAGAACGCTGCCAGCTaGCGCTCCGGCTCCCACTTC +
Preference number: 4 (lower is better)
Translates to: RLLQSTLGGTCSPAFVQSENAAS*RSGSHF
Trigger: GAAGTGGGAGCCGGAGCGGCAGCTGGCAGCGTTCTC...GCTTTGGACAAATGCAGGAGAGCAAGTCCCACCCAGTGTGCTCTGGAGCAGCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421787.5
CDS-3UTR GCA 90 bp GAGAGCTCCTTTCTCCCCGTGTACGCCACATGCACTCACTCTACAGGGACCACACTGCGGAGAGAACGCTaGCAGCTGCCGCTCCGGCTC +
Preference number: 4 (lower is better)
Translates to: ESSFLPVYATCTHSTGTTLRRER*QLPLRL
Trigger: GAGCCGGAGCGGCAGCTGGCAGCGTTCTCTCCGCAG...TGTGGTCCCTGTAGAGTGAGTGCATGTGGCGTACACGGGGAGAAAGGAGCTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508775.6
CDS-3UTR GCA 90 bp CATGGAGCACAGAAGCGAGTTGGACAAAGTCCGGGCCTTTGTAGTGTGACGTGGTGCTTGGGGGACGGCTaGTCCCCCGGCTCGGTGCAG +
Preference number: 4 (lower is better)
Translates to: HGAQKRVGQSPGLCSVTWCLGDG*SPGSVQ
Trigger: CTGCACCGAGCCGGGGGAGCAGCCGTCCCCCAAGCA...CCACGTCACACTACAAAGGCCCGGACTTTGTCCAACTCGCTTCTGTGCTCCATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000508775.6
CDS-3UTR CCA 90 bp CTCCAACAACGGAGCAGCTGGCTAAGGAACGATGTCCTGGGGCTCTGGTCACATGGGACCCTGGACCCTTaGGCTCCGCTAGCCTTCCCC +
Preference number: 4 (lower is better)
Translates to: LQQRSSWLRNDVLGLWSHGTLDP*APLAFP
Trigger: GGGGAAGGCTAGCGGAGCCCAAGGGTCCAGGGTCCC...ATGTGACCAGAGCCCCAGGACATCGTTCCTTAGCCAGCTGCTCCGTTGTTGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508775.6
CDS-3UTR TCA 90 bp TGCCACATTGTCCGCATCTACACTGTACGGCCCTCCCCTGTGCCATCCAGCTGGCCACACATACGAGCCTaGGACCCCGCTCACATGGGA +
Preference number: 4 (lower is better)
Translates to: CHIVRIYTVRPSPVPSSWPHIRA*DPAHMG
Trigger: TCCCATGTGAGCGGGGTCTCAGGCTCGTATGTGTGG...CCAGCTGGATGGCACAGGGGAGGGCCGTACAGTGTAGATGCGGACAATGTGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508775.6
CDS-3UTR TCA 90 bp TGCCACATTGTCCGCATCTACACTGTACGGCCCTCCCCTGTGCCATCCAGCTGGTTGAGGGAATGTCCCTaGGCCGCCATACTGGGGAGG +
Preference number: 4 (lower is better)
Translates to: CHIVRIYTVRPSPVPSSWLRECP*AAILGR
Trigger: CCTCCCCAGTATGGCGGCTCAGGGACATTCCCTCAA...CCAGCTGGATGGCACAGGGGAGGGCCGTACAGTGTAGATGCGGACAATGTGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508775.6
CDS-3UTR GCA 90 bp TCCCAAGCACAAAACAGCCACTCAGGCGTGGGAGAGCTCCTTTCTCCCCGTGTAGAGAACGCTGCCAGCTaGCGCTCCGGCTCCCACTTC +
Preference number: 4 (lower is better)
Translates to: SQAQNSHSGVGELLSPRVENAAS*RSGSHF
Trigger: GAAGTGGGAGCCGGAGCGGCAGCTGGCAGCGTTCTC...TACACGGGGAGAAAGGAGCTCTCCCACGCCTGAGTGGCTGTTTTGTGCTTGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508775.6
CDS-3UTR GCA 90 bp TCCCAAGCACAAAACAGCCACTCAGGCGTGGGAGAGCTCCTTTCTCCCCGTGTACTGCAGGGCGCATGGTaGCGACCTGCGGAGAGAACG +
Preference number: 4 (lower is better)
Translates to: SQAQNSHSGVGELLSPRVLQGAW*RPAERT
Trigger: CGTTCTCTCCGCAGGTCGGCACCATGCGCCCTGCAG...TACACGGGGAGAAAGGAGCTCTCCCACGCCTGAGTGGCTGTTTTGTGCTTGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508775.6
CDS-3UTR GCA 90 bp CGGCTGCTCCAGAGCACACTGGGTGGGACTTGCTCTCCTGCATTTGTCCAAAGCGCTCCCCCGGCTCGGTaGAGTTTTGCAGCTGCTGGT +
Preference number: 4 (lower is better)
Translates to: RLLQSTLGGTCSPAFVQSAPPAR*SFAAAG
Trigger: ACCAGCAGCTGCAAAACTGCACCGAGCCGGGGGAGC...GCTTTGGACAAATGCAGGAGAGCAAGTCCCACCCAGTGTGCTCTGGAGCAGCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000421787.5
CDS-3UTR GCA 90 bp GCTCTCCATCCTGAGATGCGCCTGCTCCTTTGTCCCCCTGGGAGACACTTGTACGCTCCCCCGGCTCGGTaGAGTTTTGCAGCTGCTGGT +
Preference number: 4 (lower is better)
Translates to: ALHPEMRLLLCPPGRHLYAPPAR*SFAAAG
Trigger: ACCAGCAGCTGCAAAACTGCACCGAGCCGGGGGAGC...GTACAAGTGTCTCCCAGGGGGACAAAGGAGCAGGCGCATCTCAGGATGGAGAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000508775.6
CDS-3UTR GCA 90 bp TGCCACATTGTCCGCATCTACACTGTACGGCCCTCCCCTGTGCCATCCAGCTGGGCCTTCCCCACAGCTTaGAGAAGAGGGCTCAGCTCC +
Preference number: 4 (lower is better)
Translates to: CHIVRIYTVRPSPVPSSWAFPTA*RRGLSS
Trigger: GGAGCTGAGCCCTCTTCTGCAAGCTGTGGGGAAGGC...CCAGCTGGATGGCACAGGGGAGGGCCGTACAGTGTAGATGCGGACAATGTGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508775.6
CDS-3UTR GCA 90 bp TGCCACATTGTCCGCATCTACACTGTACGGCCCTCCCCTGTGCCATCCAGCTGGCCAGGCCACCCAAACTaGGCGGAGAATCCAGGCACA +
Preference number: 4 (lower is better)
Translates to: CHIVRIYTVRPSPVPSSWPGHPN*AENPGT
Trigger: TGTGCCTGGATTCTCCGCGCAGTTTGGGTGGCCTGG...CCAGCTGGATGGCACAGGGGAGGGCCGTACAGTGTAGATGCGGACAATGTGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508775.6
3UTR CAA 72 bp CTGGGTGCTGCCTGTCTCAGGCTCTTACTGCAGAGCTaGTTTCCAGAGGGCCAGAGGCCGTCCTGTGTCTCC +
Preference number: 4 (lower is better)
Translates to: LGAACLRLLLQS*FPEGQRPSCVS
Trigger: GGAGACACAGGACGGCCTCTGGCCCTCTGGAAACAAGCTCTGCAGTAAGAGCCTGAGACAGGCAGCACCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508775.6
CDS-3UTR TCA 90 bp CTCCAACAACGGAGCAGCTGGCTAAGGAACGATGTCCTGGGGCTCTGGTCACATCAAGTTGCATCCCACTaGCCATCCCCCGGCTCCCCA +
Preference number: 4 (lower is better)
Translates to: LQQRSSWLRNDVLGLWSHQVASH*PSPGSP
Trigger: TGGGGAGCCGGGGGATGGTCAGTGGGATGCAACTTG...ATGTGACCAGAGCCCCAGGACATCGTTCCTTAGCCAGCTGCTCCGTTGTTGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000508775.6
CDS-3UTR GCA 90 bp CGGCTGCTCCAGAGCACACTGGGTGGGACTTGCTCTCCTGCATTTGTCCAAAGCCTCGGCGGCCCCATTTaGCAGCCAGACTTCCTGCTT +
Preference number: 4 (lower is better)
Translates to: RLLQSTLGGTCSPAFVQSLGGPI*QPDFLL
Trigger: AAGCAGGAAGTCTGGCTGGCAAATGGGGCCGCCGAG...GCTTTGGACAAATGCAGGAGAGCAAGTCCCACCCAGTGTGCTCTGGAGCAGCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421787.5
CDS-3UTR GCA 90 bp GCTCTCCATCCTGAGATGCGCCTGCTCCTTTGTCCCCCTGGGAGACACTTGTACTGCCTCCCACCAGGATaGTACCTTGTTGGCGTCCCC +
Preference number: 4 (lower is better)
Translates to: ALHPEMRLLLCPPGRHLYCLPPG*YLVGVP
Trigger: GGGGACGCCAACAAGGTAGCATCCTGGTGGGAGGCA...GTACAAGTGTCTCCCAGGGGGACAAAGGAGCAGGCGCATCTCAGGATGGAGAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000508775.6
CDS-3UTR CCA 90 bp TGCCACATTGTCCGCATCTACACTGTACGGCCCTCCCCTGTGCCATCCAGCTGGGCTCCTTTGTCCCCCTaGGAGACACTTGTACCCCCA +
Preference number: 4 (lower is better)
Translates to: CHIVRIYTVRPSPVPSSWAPLSP*ETLVPP
Trigger: TGGGGGTACAAGTGTCTCCCAGGGGGACAAAGGAGC...CCAGCTGGATGGCACAGGGGAGGGCCGTACAGTGTAGATGCGGACAATGTGGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000508775.6
CDS-3UTR TCA 90 bp CTCCAACAACGGAGCAGCTGGCTAAGGAACGATGTCCTGGGGCTCTGGTCACATTGGAGCTCTTCGTCTTaGCAGGGTCCCTGCGCCAAG +
Preference number: 4 (lower is better)
Translates to: LQQRSSWLRNDVLGLWSHWSSSS*QGPCAK
Trigger: CTTGGCGCAGGGACCCTGTCAAGACGAAGAGCTCCA...ATGTGACCAGAGCCCCAGGACATCGTTCCTTAGCCAGCTGCTCCGTTGTTGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508775.6
CDS-3UTR TCA 90 bp CTCCAACAACGGAGCAGCTGGCTAAGGAACGATGTCCTGGGGCTCTGGTCACATGGCTGCTCTCCATCCTaGGATGCGCCTGCTCCTTTG +
Preference number: 4 (lower is better)
Translates to: LQQRSSWLRNDVLGLWSHGCSPS*DAPAPL
Trigger: CAAAGGAGCAGGCGCATCTCAGGATGGAGAGCAGCC...ATGTGACCAGAGCCCCAGGACATCGTTCCTTAGCCAGCTGCTCCGTTGTTGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508775.6
CDS-3UTR GCA 90 bp CACCATAAGTTCCACTCATCCCTGTGGCCTAGTCCACGGGTCCTCTTTTCCATGCGCATGGTGCCGACCTaGGGAGAGAACGCTGCCAGC +
Preference number: 4 (lower is better)
Translates to: HHKFHSSLWPSPRVLFSMRMVPT*GENAAS
Trigger: GCTGGCAGCGTTCTCTCCGCAGGTCGGCACCATGCG...CATGGAAAAGAGGACCCGTGGACTAGGCCACAGGGATGAGTGGAACTTATGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508775.6
CDS-3UTR GCA 90 bp CTCCAACAACGGAGCAGCTGGCTAAGGAACGATGTCCTGGGGCTCTGGTCACATCTCGGCGGCCCCATTTaGCAGCCAGACTTCCTGCTT +
Preference number: 4 (lower is better)
Translates to: LQQRSSWLRNDVLGLWSHLGGPI*QPDFLL
Trigger: AAGCAGGAAGTCTGGCTGGCAAATGGGGCCGCCGAG...ATGTGACCAGAGCCCCAGGACATCGTTCCTTAGCCAGCTGCTCCGTTGTTGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508775.6
CDS-3UTR GCA 90 bp CTCCAACAACGGAGCAGCTGGCTAAGGAACGATGTCCTGGGGCTCTGGTCACATATCAGCGTGGGCTCCTaGCATGCGTGGAGCTCTTCG +
Preference number: 4 (lower is better)
Translates to: LQQRSSWLRNDVLGLWSHISVGS*HAWSSS
Trigger: CGAAGAGCTCCACGCATGGCAGGAGCCCACGCTGAT...ATGTGACCAGAGCCCCAGGACATCGTTCCTTAGCCAGCTGCTCCGTTGTTGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508775.6
CDS-3UTR GCA 90 bp TCCCAAGCACAAAACAGCCACTCAGGCGTGGGAGAGCTCCTTTCTCCCCGTGTATACGGCCCTCCCCTGTaGCATCCAGCTGGCATCTTC +
Preference number: 4 (lower is better)
Translates to: SQAQNSHSGVGELLSPRVYGPPL*HPAGIF
Trigger: GAAGATGCCAGCTGGATGGCACAGGGGAGGGCCGTA...TACACGGGGAGAAAGGAGCTCTCCCACGCCTGAGTGGCTGTTTTGTGCTTGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000508775.6
CDS-3UTR GCA 90 bp GAGAGCTCCTTTCTCCCCGTGTACGCCACATGCACTCACTCTACAGGGACCACACGTCCTCACCTACACTaGACAGCCCTCACCTCTGCC +
Preference number: 4 (lower is better)
Translates to: ESSFLPVYATCTHSTGTTRPHLH*TALTSA
Trigger: GGCAGAGGTGAGGGCTGTGCAGTGTAGGTGAGGACG...TGTGGTCCCTGTAGAGTGAGTGCATGTGGCGTACACGGGGAGAAAGGAGCTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508775.6
CDS-3UTR GCA 90 bp CTCCAACAACGGAGCAGCTGGCTAAGGAACGATGTCCTGGGGCTCTGGTCACATACAGTCTCGGCTCACTaGAGCCTCCACCTCCTGGGT +
Preference number: 4 (lower is better)
Translates to: LQQRSSWLRNDVLGLWSHTVSAH*SLHLLG
Trigger: ACCCAGGAGGTGGAGGCTGCAGTGAGCCGAGACTGT...ATGTGACCAGAGCCCCAGGACATCGTTCCTTAGCCAGCTGCTCCGTTGTTGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508775.6
CDS-3UTR CCA 90 bp CTCCAACAACGGAGCAGCTGGCTAAGGAACGATGTCCTGGGGCTCTGGTCACATACAGCCACTCAGGCGTaGGAGAGCTCCTTTCTCCCC +
Preference number: 4 (lower is better)
Translates to: LQQRSSWLRNDVLGLWSHTATQA*ESSFLP
Trigger: GGGGAGAAAGGAGCTCTCCCACGCCTGAGTGGCTGT...ATGTGACCAGAGCCCCAGGACATCGTTCCTTAGCCAGCTGCTCCGTTGTTGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508775.6
CDS-3UTR CCA 90 bp TCCCAAGCACAAAACAGCCACTCAGGCGTGGGAGAGCTCCTTTCTCCCCGTGTAAGAAGCTGTCAGGCCTaGCTGGGTGCTGCCTGTCTC +
Preference number: 4 (lower is better)
Translates to: SQAQNSHSGVGELLSPRVRSCQA*LGAACL
Trigger: GAGACAGGCAGCACCCAGCCAGGCCTGACAGCTTCT...TACACGGGGAGAAAGGAGCTCTCCCACGCCTGAGTGGCTGTTTTGTGCTTGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508775.6
CDS-3UTR CCA 90 bp GAGAGCTCCTTTCTCCCCGTGTACGCCACATGCACTCACTCTACAGGGACCACAGGGACAATGACAAGGTaGGGACCCTGGACCCTTGGG +
Preference number: 4 (lower is better)
Translates to: ESSFLPVYATCTHSTGTTGTMTR*GPWTLG
Trigger: CCCAAGGGTCCAGGGTCCCCACCTTGTCATTGTCCC...TGTGGTCCCTGTAGAGTGAGTGCATGTGGCGTACACGGGGAGAAAGGAGCTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508775.6
CDS-3UTR CCA 90 bp CACCATAAGTTCCACTCATCCCTGTGGCCTAGTCCACGGGTCCTCTTTTCCATGGAAGAGAAGAGGCCCTaGTCCCTGGGCGTGGAGGCG +
Preference number: 4 (lower is better)
Translates to: HHKFHSSLWPSPRVLFSMEEKRP*SLGVEA
Trigger: CGCCTCCACGCCCAGGGACCAGGGCCTCTTCTCTTC...CATGGAAAAGAGGACCCGTGGACTAGGCCACAGGGATGAGTGGAACTTATGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508775.6
CDS-3UTR TCA 90 bp GCTCTCCATCCTGAGATGCGCCTGCTCCTTTGTCCCCCTGGGAGACACTTGTACTGGAAGAGACTGCTCTaGCGGAGACAGGAGATGGCT +
Preference number: 4 (lower is better)
Translates to: ALHPEMRLLLCPPGRHLYWKRLL*RRQEMA
Trigger: AGCCATCTCCTGTCTCCGTCAGAGCAGTCTCTTCCA...GTACAAGTGTCTCCCAGGGGGACAAAGGAGCAGGCGCATCTCAGGATGGAGAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000508775.6
CDS-3UTR TCA 90 bp CGACACCTACTTTCTCACCGTCCCATCTGCCTGGTAAACCTTTGTCTCTCTCTGGCCAGCGTCCAGCACTaGCAGTCAGGTGGCGTGGCA +
Preference number: 4 (lower is better)
Translates to: RHLLSHRPICLVNLCLSLASVQH*QSGGVA
Trigger: TGCCACGCCACCTGACTGTCAGTGCTGGACGCTGGC...CAGAGAGAGACAAAGGTTTACCAGGCAGATGGGACGGTGAGAAAGTAGGTGTCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508775.6
CDS-3UTR GCA 90 bp TGCAGAAGAGGGCTCAGCTCCTCCATTACAGAAGAGACAAAATACAGGGACTGCGCACGTCCCGGGCTCTaGTTCGCGACCCACAGCGAC +
Preference number: 4 (lower is better)
Translates to: CRRGLSSSITEETKYRDCARPGL*FATHSD
Trigger: GTCGCTGTGGGTCGCGAAGCAGAGCCCGGGACGTGC...GCAGTCCCTGTATTTTGTCTCTTCTGTAATGGAGGAGCTGAGCCCTCTTCTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508775.6
CDS-3UTR GCA 90 bp TCCCAAGCACAAAACAGCCACTCAGGCGTGGGAGAGCTCCTTTCTCCCCGTGTAGCGGCGCAGGTCCCATaGTTTTCCCACTCATGCTTC +
Preference number: 4 (lower is better)
Translates to: SQAQNSHSGVGELLSPRVAAQVP*FSHSCF
Trigger: GAAGCATGAGTGGGAAAAGCATGGGACCTGCGCCGC...TACACGGGGAGAAAGGAGCTCTCCCACGCCTGAGTGGCTGTTTTGTGCTTGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000508775.6
CDS-3UTR GCA 90 bp CATGGAGCACAGAAGCGAGTTGGACAAAGTCCGGGCCTTTGTAGTGTGACGTGGCGTGGGCTCCTGCCATaGGTGGAGCTCTTCGTCTTG +
Preference number: 4 (lower is better)
Translates to: HGAQKRVGQSPGLCSVTWRGLLP*VELFVL
Trigger: CAAGACGAAGAGCTCCACGCATGGCAGGAGCCCACG...CCACGTCACACTACAAAGGCCCGGACTTTGTCCAACTCGCTTCTGTGCTCCATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508775.6
CDS-3UTR GCA 90 bp GCTCTCCATCCTGAGATGCGCCTGCTCCTTTGTCCCCCTGGGAGACACTTGTACCTCACTCTGTCTGTCTaGAGAAGCTGTCAGGCCTGG +
Preference number: 4 (lower is better)
Translates to: ALHPEMRLLLCPPGRHLYLTLSV*RSCQAW
Trigger: CCAGGCCTGACAGCTTCTGCAGACAGACAGAGTGAG...GTACAAGTGTCTCCCAGGGGGACAAAGGAGCAGGCGCATCTCAGGATGGAGAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000508775.6
CDS-3UTR GCA 90 bp GAGAGCTCCTTTCTCCCCGTGTACGCCACATGCACTCACTCTACAGGGACCACACAAAGGCCAGCCGACTaGAGACAGCCTCTGAAGAGC +
Preference number: 4 (lower is better)
Translates to: ESSFLPVYATCTHSTGTTQRPAD*RQPLKS
Trigger: GCTCTTCAGAGGCTGTCTGCAGTCGGCTGGCCTTTG...TGTGGTCCCTGTAGAGTGAGTGCATGTGGCGTACACGGGGAGAAAGGAGCTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508775.6
CDS-3UTR GCA 90 bp GAGAGCTCCTTTCTCCCCGTGTACGCCACATGCACTCACTCTACAGGGACCACAATCCTGAGATGCGCCTaGTCCTTTGTCCCCCTGGGA +
Preference number: 4 (lower is better)
Translates to: ESSFLPVYATCTHSTGTTILRCA*SFVPLG
Trigger: TCCCAGGGGGACAAAGGAGCAGGCGCATCTCAGGAT...TGTGGTCCCTGTAGAGTGAGTGCATGTGGCGTACACGGGGAGAAAGGAGCTCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000508775.6
CDS-3UTR GCA 90 bp TCCCAAGCACAAAACAGCCACTCAGGCGTGGGAGAGCTCCTTTCTCCCCGTGTATGGCGTGGCAGTCAATaGATGGCCCAGATGGGAGAC +
Preference number: 4 (lower is better)
Translates to: SQAQNSHSGVGELLSPRVWRGSQ*MAQMGD
Trigger: GTCTCCCATCTGGGCCATGCATTGACTGCCACGCCA...TACACGGGGAGAAAGGAGCTCTCCCACGCCTGAGTGGCTGTTTTGTGCTTGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508775.6
CDS-3UTR GCA 90 bp CATGGAGCACAGAAGCGAGTTGGACAAAGTCCGGGCCTTTGTAGTGTGACGTGGAGTGGGTGGAGGCACTaGCAACAGGGCAGGAGGGAT +
Preference number: 4 (lower is better)
Translates to: HGAQKRVGQSPGLCSVTWSGWRH*QQGRRD
Trigger: ATCCCTCCTGCCCTGTTGGCAGTGCCTCCACCCACT...CCACGTCACACTACAAAGGCCCGGACTTTGTCCAACTCGCTTCTGTGCTCCATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508775.6
CDS-3UTR GCA 90 bp CTCCAACAACGGAGCAGCTGGCTAAGGAACGATGTCCTGGGGCTCTGGTCACATATGGCCATGTCCCAGTaGCTAGAAGAGAGGCGGCTC +
Preference number: 4 (lower is better)
Translates to: LQQRSSWLRNDVLGLWSHMAMSQ*LEERRL
Trigger: GAGCCGCCTCTCTTCTAGGCACTGGGACATGGCCAT...ATGTGACCAGAGCCCCAGGACATCGTTCCTTAGCCAGCTGCTCCGTTGTTGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508775.6
CDS-3UTR CCA 90 bp CGGCTGCTCCAGAGCACACTGGGTGGGACTTGCTCTCCTGCATTTGTCCAAAGCAGATTCGCGGTTGCTTaGGGGTTCAAGGGGAGGAAG +
Preference number: 4 (lower is better)
Translates to: RLLQSTLGGTCSPAFVQSRFAVA*GFKGRK
Trigger: CTTCCTCCCCTTGAACCCCCAAGCAACCGCGAATCT...GCTTTGGACAAATGCAGGAGAGCAAGTCCCACCCAGTGTGCTCTGGAGCAGCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421787.5
CDS-3UTR CCA 90 bp GCTCTCCATCCTGAGATGCGCCTGCTCCTTTGTCCCCCTGGGAGACACTTGTACGAGACCCCGCTCACATaGGAGGCATTTCTCAGTCAC +
Preference number: 4 (lower is better)
Translates to: ALHPEMRLLLCPPGRHLYETPLT*EAFLSH
Trigger: GTGACTGAGAAATGCCTCCCATGTGAGCGGGGTCTC...GTACAAGTGTCTCCCAGGGGGACAAAGGAGCAGGCGCATCTCAGGATGGAGAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000508775.6
CDS-3UTR CCA 90 bp CGACACCTACTTTCTCACCGTCCCATCTGCCTGGTAAACCTTTGTCTCTCTCTGCTCTGTTGCCCAGGCTaGAGGGTGGAGCGCAGTGGC +
Preference number: 4 (lower is better)
Translates to: RHLLSHRPICLVNLCLSLLCCPG*RVERSG
Trigger: GCCACTGCGCTCCACCCTCCAGCCTGGGCAACAGAG...CAGAGAGAGACAAAGGTTTACCAGGCAGATGGGACGGTGAGAAAGTAGGTGTCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508775.6
3UTR CAA 72 bp CACTGTCTCTGCTGTCCAGTCCTCACCTATGCCACATaGTCCGCATCTACACTGTACGGCCCTCCCCTGTGC +
Preference number: 4 (lower is better)
Translates to: HCLCCPVLTYAT*SASTLYGPPLC
Trigger: GCACAGGGGAGGGCCGTACAGTGTAGATGCGGACAATGTGGCATAGGTGAGGACTGGACAGCAGAGACAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508775.6
CDS-3UTR TCA 90 bp CATGGAGCACAGAAGCGAGTTGGACAAAGTCCGGGCCTTTGTAGTGTGACGTGGTCTAGGACACACCTGTaGCCACACCAGGCCTCCAAC +
Preference number: 4 (lower is better)
Translates to: HGAQKRVGQSPGLCSVTWSRTHL*PHQASN
Trigger: GTTGGAGGCCTGGTGTGGTCACAGGTGTGTCCTAGA...CCACGTCACACTACAAAGGCCCGGACTTTGTCCAACTCGCTTCTGTGCTCCATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508775.6
CDS-3UTR TCA 90 bp CTCCAACAACGGAGCAGCTGGCTAAGGAACGATGTCCTGGGGCTCTGGTCACATAGTACACCCACTCCCTaGGGACGCAGAGCAAATGCA +
Preference number: 4 (lower is better)
Translates to: LQQRSSWLRNDVLGLWSHSTPTP*GRRANA
Trigger: TGCATTTGCTCTGCGTCCTCAGGGAGTGGGTGTACT...ATGTGACCAGAGCCCCAGGACATCGTTCCTTAGCCAGCTGCTCCGTTGTTGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508775.6
CDS-3UTR TCA 90 bp TGCCACATTGTCCGCATCTACACTGTACGGCCCTCCCCTGTGCCATCCAGCTGGTGTTCTACCTGCTCCTaGGCTCTAGGCCAAAATAGG +
Preference number: 4 (lower is better)
Translates to: CHIVRIYTVRPSPVPSSWCSTCS*ALGQNR
Trigger: CCTATTTTGGCCTAGAGCTCAGGAGCAGGTAGAACA...CCAGCTGGATGGCACAGGGGAGGGCCGTACAGTGTAGATGCGGACAATGTGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508775.6
CDS-3UTR GCA 90 bp CGACACCTACTTTCTCACCGTCCCATCTGCCTGGTAAACCTTTGTCTCTCTCTGCCACTTCCCACCTGCTaGCCGAGGAAGACTTCCGGG +
Preference number: 4 (lower is better)
Translates to: RHLLSHRPICLVNLCLSLPLPTC*PRKTSG
Trigger: CCCGGAAGTCTTCCTCGGGCAGCAGGTGGGAAGTGG...CAGAGAGAGACAAAGGTTTACCAGGCAGATGGGACGGTGAGAAAGTAGGTGTCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508775.6
CDS-3UTR GCA 90 bp TGCCACATTGTCCGCATCTACACTGTACGGCCCTCCCCTGTGCCATCCAGCTGGTGCAGCTGCTGGTCTTaGTTAGTGAGGCACAGTTCT +
Preference number: 4 (lower is better)
Translates to: CHIVRIYTVRPSPVPSSWCSCWS*LVRHSS
Trigger: AGAACTGTGCCTCACTAAGCAAGACCAGCAGCTGCA...CCAGCTGGATGGCACAGGGGAGGGCCGTACAGTGTAGATGCGGACAATGTGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508775.6
CDS-3UTR GCA 90 bp TGCCACATTGTCCGCATCTACACTGTACGGCCCTCCCCTGTGCCATCCAGCTGGCTAAATAGATACCAGTaGAGGGACCTGGCTACCCTC +
Preference number: 4 (lower is better)
Translates to: CHIVRIYTVRPSPVPSSWLNRYQ*RDLATL
Trigger: GAGGGTAGCCAGGTCCCTGCACTGGTATCTATTTAG...CCAGCTGGATGGCACAGGGGAGGGCCGTACAGTGTAGATGCGGACAATGTGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508775.6
CDS-3UTR GCA 90 bp TCCCAAGCACAAAACAGCCACTCAGGCGTGGGAGAGCTCCTTTCTCCCCGTGTATGCACAGCCCCCAGATaGCTCACTCCACGAGTGAAA +
Preference number: 4 (lower is better)
Translates to: SQAQNSHSGVGELLSPRVCTAPR*LTPRVK
Trigger: TTTCACTCGTGGAGTGAGGCATCTGGGGGCTGTGCA...TACACGGGGAGAAAGGAGCTCTCCCACGCCTGAGTGGCTGTTTTGTGCTTGGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000508775.6
CDS-3UTR GCA 90 bp TGCCACATTGTCCGCATCTACACTGTACGGCCCTCCCCTGTGCCATCCAGCTGGTCCAGTCCTCACCTATaGCACATTGTCCGCATCTAC +
Preference number: 4 (lower is better)
Translates to: CHIVRIYTVRPSPVPSSWSSPHL*HIVRIY
Trigger: GTAGATGCGGACAATGTGGCATAGGTGAGGACTGGA...CCAGCTGGATGGCACAGGGGAGGGCCGTACAGTGTAGATGCGGACAATGTGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508775.6
CDS-3UTR GCA 90 bp TCCCAAGCACAAAACAGCCACTCAGGCGTGGGAGAGCTCCTTTCTCCCCGTGTAGCTCCTCTTTTCCCTTaGCGTCTGTTGCCCTGCACT +
Preference number: 4 (lower is better)
Translates to: SQAQNSHSGVGELLSPRVAPLFP*RLLPCT
Trigger: AGTGCAGGGCAACAGACGGCAAGGGAAAAGAGGAGC...TACACGGGGAGAAAGGAGCTCTCCCACGCCTGAGTGGCTGTTTTGTGCTTGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000508775.6
CDS-3UTR CCA 90 bp TGCCACATTGTCCGCATCTACACTGTACGGCCCTCCCCTGTGCCATCCAGCTGGACAGCGAGAACCGTGTaGTCAGAGTTGCATCTTCCT +
Preference number: 4 (lower is better)
Translates to: CHIVRIYTVRPSPVPSSWTARTV*SELHLP
Trigger: AGGAAGATGCAACTCTGACCACACGGTTCTCGCTGT...CCAGCTGGATGGCACAGGGGAGGGCCGTACAGTGTAGATGCGGACAATGTGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508775.6
CDS-3UTR CCA 90 bp TCCCAAGCACAAAACAGCCACTCAGGCGTGGGAGAGCTCCTTTCTCCCCGTGTAGTGGCAGTCAATGCATaGCCCAGATGGGAGACTGAG +
Preference number: 4 (lower is better)
Translates to: SQAQNSHSGVGELLSPRVVAVNA*PRWETE
Trigger: CTCAGTCTCCCATCTGGGCCATGCATTGACTGCCAC...TACACGGGGAGAAAGGAGCTCTCCCACGCCTGAGTGGCTGTTTTGTGCTTGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508775.6
CDS-3UTR CCA 90 bp GAGAGCTCCTTTCTCCCCGTGTACGCCACATGCACTCACTCTACAGGGACCACAGCACTGACAGTCAGGTaGCGTGGCAGTCAATGCATG +
Preference number: 4 (lower is better)
Translates to: ESSFLPVYATCTHSTGTTALTVR*RGSQCM
Trigger: CATGCATTGACTGCCACGCCACCTGACTGTCAGTGC...TGTGGTCCCTGTAGAGTGAGTGCATGTGGCGTACACGGGGAGAAAGGAGCTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508775.6
CDS-3UTR CCA 90 bp CGACACCTACTTTCTCACCGTCCCATCTGCCTGGTAAACCTTTGTCTCTCTCTGAGCCCTCATGGGCTGTaGGGAGTGGGTGGAGGCACT +
Preference number: 4 (lower is better)
Translates to: RHLLSHRPICLVNLCLSLSPHGL*GVGGGT
Trigger: AGTGCCTCCACCCACTCCCCACAGCCCATGAGGGCT...CAGAGAGAGACAAAGGTTTACCAGGCAGATGGGACGGTGAGAAAGTAGGTGTCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508775.6
CDS-3UTR TCA 90 bp CGGCTGCTCCAGAGCACACTGGGTGGGACTTGCTCTCCTGCATTTGTCCAAAGCTTAGAAGCACACTGTTaGGGTCCAGCTCCCTGTAGA +
Preference number: 4 (lower is better)
Translates to: RLLQSTLGGTCSPAFVQSLEAHC*GPAPCR
Trigger: TCTACAGGGAGCTGGACCTCAACAGTGTGCTTCTAA...GCTTTGGACAAATGCAGGAGAGCAAGTCCCACCCAGTGTGCTCTGGAGCAGCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421787.5
CDS-3UTR TCA 90 bp TGCAGAAGAGGGCTCAGCTCCTCCATTACAGAAGAGACAAAATACAGGGACTGCGCCTCACTCCACGAGTaGAATCCCTGCACGGCAGGC +
Preference number: 4 (lower is better)
Translates to: CRRGLSSSITEETKYRDCASLHE*NPCTAG
Trigger: GCCTGCCGTGCAGGGATTTCACTCGTGGAGTGAGGC...GCAGTCCCTGTATTTTGTCTCTTCTGTAATGGAGGAGCTGAGCCCTCTTCTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508775.6
CDS-3UTR TCA 90 bp TCCCAAGCACAAAACAGCCACTCAGGCGTGGGAGAGCTCCTTTCTCCCCGTGTACCTCCTGGCTTCAAGTaGTTCATTCTCCTGCCTCAG +
Preference number: 4 (lower is better)
Translates to: SQAQNSHSGVGELLSPRVPPGFK*FILLPQ
Trigger: CTGAGGCAGGAGAATGAATCACTTGAAGCCAGGAGG...TACACGGGGAGAAAGGAGCTCTCCCACGCCTGAGTGGCTGTTTTGTGCTTGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508775.6
CDS-3UTR TCA 90 bp TGCAGAAGAGGGCTCAGCTCCTCCATTACAGAAGAGACAAAATACAGGGACTGCACGCTTGACCTCAAGTaGTCCGCCCACCTCGGCCTC +
Preference number: 4 (lower is better)
Translates to: CRRGLSSSITEETKYRDCTLDLK*SAHLGL
Trigger: GAGGCCGAGGTGGGCGGATCACTTGAGGTCAAGCGT...GCAGTCCCTGTATTTTGTCTCTTCTGTAATGGAGGAGCTGAGCCCTCTTCTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508775.6
CDS-3UTR TCA 90 bp CTCCAACAACGGAGCAGCTGGCTAAGGAACGATGTCCTGGGGCTCTGGTCACATTCTGTTGCCCAAGCTTaGGTACAGTCTCGGCTCACT +
Preference number: 4 (lower is better)
Translates to: LQQRSSWLRNDVLGLWSHSVAQA*VQSRLT
Trigger: AGTGAGCCGAGACTGTACTCAAGCTTGGGCAACAGA...ATGTGACCAGAGCCCCAGGACATCGTTCCTTAGCCAGCTGCTCCGTTGTTGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508775.6
CDS-3UTR TCA 90 bp TGCCACATTGTCCGCATCTACACTGTACGGCCCTCCCCTGTGCCATCCAGCTGGTTGGGAGCATCTTGGTaGCTGGCTGAATCTTGTACA +
Preference number: 4 (lower is better)
Translates to: CHIVRIYTVRPSPVPSSWLGASW*LAESCT
Trigger: TGTACAAGATTCAGCCAGTCACCAAGATGCTCCCAA...CCAGCTGGATGGCACAGGGGAGGGCCGTACAGTGTAGATGCGGACAATGTGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508775.6
CDS-3UTR TCA 90 bp TCCCAAGCACAAAACAGCCACTCAGGCGTGGGAGAGCTCCTTTCTCCCCGTGTAGAGGTACCAAGCCCCTaGATATTGGGAGCATCTTGG +
Preference number: 4 (lower is better)
Translates to: SQAQNSHSGVGELLSPRVEVPSP*ILGASW
Trigger: CCAAGATGCTCCCAATATTCAGGGGCTTGGTACCTC...TACACGGGGAGAAAGGAGCTCTCCCACGCCTGAGTGGCTGTTTTGTGCTTGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000508775.6
CDS-3UTR GCA 90 bp CGGCTGCTCCAGAGCACACTGGGTGGGACTTGCTCTCCTGCATTTGTCCAAAGCTGCAGCTGCTGGTCTTaGTTAGTGAGGCACAGTTCT +
Preference number: 4 (lower is better)
Translates to: RLLQSTLGGTCSPAFVQSCSCWS*LVRHSS
Trigger: AGAACTGTGCCTCACTAAGCAAGACCAGCAGCTGCA...GCTTTGGACAAATGCAGGAGAGCAAGTCCCACCCAGTGTGCTCTGGAGCAGCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421787.5
CDS-3UTR GCA 90 bp CGACACCTACTTTCTCACCGTCCCATCTGCCTGGTAAACCTTTGTCTCTCTCTGATGGTGCCGCAGAGATaGTCCAGGCAGACGCCTGCT +
Preference number: 4 (lower is better)
Translates to: RHLLSHRPICLVNLCLSLMVPQR*SRQTPA
Trigger: AGCAGGCGTCTGCCTGGAGCATCTCTGCGGCACCAT...CAGAGAGAGACAAAGGTTTACCAGGCAGATGGGACGGTGAGAAAGTAGGTGTCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508775.6
CDS-3UTR GCA 90 bp CTCCAACAACGGAGCAGCTGGCTAAGGAACGATGTCCTGGGGCTCTGGTCACATACAGGTATAAGCCACTaGGCCTGGCCCATCTCAAAC +
Preference number: 4 (lower is better)
Translates to: LQQRSSWLRNDVLGLWSHTGISH*AWPISN
Trigger: GTTTGAGATGGGCCAGGCGCAGTGGCTTATACCTGT...ATGTGACCAGAGCCCCAGGACATCGTTCCTTAGCCAGCTGCTCCGTTGTTGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508775.6
CDS-3UTR CCA 90 bp TGCAGAAGAGGGCTCAGCTCCTCCATTACAGAAGAGACAAAATACAGGGACTGCGTGCGCCCGGAGCCCTaGGACGGCCTAAACCAGTAT +
Preference number: 4 (lower is better)
Translates to: CRRGLSSSITEETKYRDCVRPEP*DGLNQY
Trigger: ATACTGGTTTAGGCCGTCCCAGGGCTCCGGGCGCAC...GCAGTCCCTGTATTTTGTCTCTTCTGTAATGGAGGAGCTGAGCCCTCTTCTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508775.6
CDS-3UTR CCA 90 bp GAGAGCTCCTTTCTCCCCGTGTACGCCACATGCACTCACTCTACAGGGACCACAGACGGAGACAGGAGATaGCTGCTCTGTGAATACACC +
Preference number: 4 (lower is better)
Translates to: ESSFLPVYATCTHSTGTTDGDRR*LLCEYT
Trigger: GGTGTATTCACAGAGCAGCCATCTCCTGTCTCCGTC...TGTGGTCCCTGTAGAGTGAGTGCATGTGGCGTACACGGGGAGAAAGGAGCTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508775.6
CDS-3UTR CCA 90 bp TGCCACATTGTCCGCATCTACACTGTACGGCCCTCCCCTGTGCCATCCAGCTGGCTTAACGGCCAACCATaGAACTGGGTGTTGATATCC +
Preference number: 4 (lower is better)
Translates to: CHIVRIYTVRPSPVPSSWLNGQP*NWVLIS
Trigger: GGATATCAACACCCAGTTCCATGGTTGGCCGTTAAG...CCAGCTGGATGGCACAGGGGAGGGCCGTACAGTGTAGATGCGGACAATGTGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508775.6
CDS-3UTR CCA 90 bp GCTCTCCATCCTGAGATGCGCCTGCTCCTTTGTCCCCCTGGGAGACACTTGTACCTTTGTAGTGTGACGTaGCCATTAGGGCCCACAGAT +
Preference number: 4 (lower is better)
Translates to: ALHPEMRLLLCPPGRHLYLCSVT*PLGPTD
Trigger: ATCTGTGGGCCCTAATGGCCACGTCACACTACAAAG...GTACAAGTGTCTCCCAGGGGGACAAAGGAGCAGGCGCATCTCAGGATGGAGAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000508775.6
CDS-3UTR CCA 90 bp CTCCAACAACGGAGCAGCTGGCTAAGGAACGATGTCCTGGGGCTCTGGTCACATAGCACAGAAGCGAGTTaGACAAAGTCCGGGCCTTTG +
Preference number: 4 (lower is better)
Translates to: LQQRSSWLRNDVLGLWSHSTEAS*TKSGPL
Trigger: CAAAGGCCCGGACTTTGTCCAACTCGCTTCTGTGCT...ATGTGACCAGAGCCCCAGGACATCGTTCCTTAGCCAGCTGCTCCGTTGTTGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508775.6
CDS-3UTR CCA 90 bp TCCCAAGCACAAAACAGCCACTCAGGCGTGGGAGAGCTCCTTTCTCCCCGTGTAACACAGGTGCACTCATaGAGCACAGAAGCGAGTTGG +
Preference number: 4 (lower is better)
Translates to: SQAQNSHSGVGELLSPRVTQVHS*STEASW
Trigger: CCAACTCGCTTCTGTGCTCCATGAGTGCACCTGTGT...TACACGGGGAGAAAGGAGCTCTCCCACGCCTGAGTGGCTGTTTTGTGCTTGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508775.6
3UTR CAA 72 bp AAAGCATTGTCCCCTCCCAGGCCAAGAGAAATGCTCTaGGGTACAGCAATAGCCCTGCTGAGAAGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: KALSPPRPREML*GTAIALLRRGW
Trigger: CCAGCCCCTTCTCAGCAGGGCTATTGCTGTACCCAAGAGCATTTCTCTTGGCCTGGGAGGGGACAATGCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508775.6
CDS-3UTR TCA 90 bp GAGAGCTCCTTTCTCCCCGTGTACGCCACATGCACTCACTCTACAGGGACCACAGGCAGAAGAATTGCTTaGACCCAGGAGACAGAGGTT +
Preference number: 4 (lower is better)
Translates to: ESSFLPVYATCTHSTGTTGRRIA*TQETEV
Trigger: AACCTCTGTCTCCTGGGTTCAAGCAATTCTTCTGCC...TGTGGTCCCTGTAGAGTGAGTGCATGTGGCGTACACGGGGAGAAAGGAGCTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508775.6
CDS-3UTR TCA 90 bp CTCCAACAACGGAGCAGCTGGCTAAGGAACGATGTCCTGGGGCTCTGGTCACATCAGAAGAGCAGATGGTaGCAGGTACCAACCACCAAA +
Preference number: 4 (lower is better)
Translates to: LQQRSSWLRNDVLGLWSHQKSRW*QVPTTK
Trigger: TTTGGTGGTTGGTACCTGTCACCATCTGCTCTTCTG...ATGTGACCAGAGCCCCAGGACATCGTTCCTTAGCCAGCTGCTCCGTTGTTGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508775.6
CDS-3UTR GCA 90 bp TCGAGTCATGAAAAGACACTGGAGGAACTGCAAACATACATTGCTAAGTGCAAGTGCTTGGGGGACGGCTaGTCCCCCGGCTCGGTGCAG +
Preference number: 4 (lower is better)
Translates to: SSHEKTLEELQTYIAKCKCLGDG*SPGSVQ
Trigger: CTGCACCGAGCCGGGGGAGCAGCCGTCCCCCAAGCA...CTTGCACTTAGCAATGTATGTTTGCAGTTCCTCCAGTGTCTTTTCATGACTCGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000421787.5
CDS-3UTR GCA 90 bp GAGAGCTCCTTTCTCCCCGTGTACGCCACATGCACTCACTCTACAGGGACCACAGTCTCAGGCTCTTACTaGAGAGCTTGTTTCCAGAGG +
Preference number: 4 (lower is better)
Translates to: ESSFLPVYATCTHSTGTTVSGSY*RACFQR
Trigger: CCTCTGGAAACAAGCTCTGCAGTAAGAGCCTGAGAC...TGTGGTCCCTGTAGAGTGAGTGCATGTGGCGTACACGGGGAGAAAGGAGCTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508775.6
CDS-3UTR GCA 90 bp GAGAGCTCCTTTCTCCCCGTGTACGCCACATGCACTCACTCTACAGGGACCACAATCCTTCCCTGCAGTTaGTGTCTCCCTTTCTTCAGG +
Preference number: 4 (lower is better)
Translates to: ESSFLPVYATCTHSTGTTILPCS*CLPFFR
Trigger: CCTGAAGAAAGGGAGACAGCAACTGCAGGGAAGGAT...TGTGGTCCCTGTAGAGTGAGTGCATGTGGCGTACACGGGGAGAAAGGAGCTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508775.6
CDS-3UTR GCA 90 bp CATGGAGCACAGAAGCGAGTTGGACAAAGTCCGGGCCTTTGTAGTGTGACGTGGAGGTGCCCGCCACCATaGCCGGCCAATTTTTGTATT +
Preference number: 4 (lower is better)
Translates to: HGAQKRVGQSPGLCSVTWRCPPP*PANFCI
Trigger: AATACAAAAATTGGCCGGGCATGGTGGCGGGCACCT...CCACGTCACACTACAAAGGCCCGGACTTTGTCCAACTCGCTTCTGTGCTCCATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000508775.6
CDS-3UTR CCA 90 bp CGGCTGCTCCAGAGCACACTGGGTGGGACTTGCTCTCCTGCATTTGTCCAAAGCCTTGGTGGAAGGCACTaGATTTTGGGTATCACTCCA +
Preference number: 4 (lower is better)
Translates to: RLLQSTLGGTCSPAFVQSLGGRH*ILGITP
Trigger: TGGAGTGATACCCAAAATCCAGTGCCTTCCACCAAG...GCTTTGGACAAATGCAGGAGAGCAAGTCCCACCCAGTGTGCTCTGGAGCAGCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421787.5
CDS-3UTR CCA 90 bp CGACACCTACTTTCTCACCGTCCCATCTGCCTGGTAAACCTTTGTCTCTCTCTGTTCCACTCATCCCTGTaGCCTAGTCCACGGGTCCTC +
Preference number: 4 (lower is better)
Translates to: RHLLSHRPICLVNLCLSLFHSSL*PSPRVL
Trigger: GAGGACCCGTGGACTAGGCCACAGGGATGAGTGGAA...CAGAGAGAGACAAAGGTTTACCAGGCAGATGGGACGGTGAGAAAGTAGGTGTCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508775.6
CDS-3UTR CCA 90 bp TCCCAAGCACAAAACAGCCACTCAGGCGTGGGAGAGCTCCTTTCTCCCCGTGTACTCCCACTACTAGCTTaGAGAGAGGGATTGCTTTCC +
Preference number: 4 (lower is better)
Translates to: SQAQNSHSGVGELLSPRVLPLLA*REGLLS
Trigger: GGAAAGCAATCCCTCTCTCCAAGCTAGTAGTGGGAG...TACACGGGGAGAAAGGAGCTCTCCCACGCCTGAGTGGCTGTTTTGTGCTTGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508775.6
CDS-3UTR CCA 90 bp CACCATAAGTTCCACTCATCCCTGTGGCCTAGTCCACGGGTCCTCTTTTCCATGGTTGGTTACGGAGAGTaGCACAAACACGGTGCCAGC +
Preference number: 4 (lower is better)
Translates to: HHKFHSSLWPSPRVLFSMVGYGE*HKHGAS
Trigger: GCTGGCACCGTGTTTGTGCCACTCTCCGTAACCAAC...CATGGAAAAGAGGACCCGTGGACTAGGCCACAGGGATGAGTGGAACTTATGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508775.6
CDS-3UTR CCA 90 bp GAGAGCTCCTTTCTCCCCGTGTACGCCACATGCACTCACTCTACAGGGACCACAAAAATTAGCCGGGCATaGTGGCATATGCCACCACTC +
Preference number: 4 (lower is better)
Translates to: ESSFLPVYATCTHSTGTTKISRA*WHMPPL
Trigger: GAGTGGTGGCATATGCCACCATGCCCGGCTAATTTT...TGTGGTCCCTGTAGAGTGAGTGCATGTGGCGTACACGGGGAGAAAGGAGCTCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000508775.6
CDS-3UTR CCA 90 bp CTCCAACAACGGAGCAGCTGGCTAAGGAACGATGTCCTGGGGCTCTGGTCACATCAGACTGGAGTGCAATaGTGTGATTTCGGCTCACTG +
Preference number: 4 (lower is better)
Translates to: LQQRSSWLRNDVLGLWSHQTGVQ*CDFGSL
Trigger: CAGTGAGCCGAAATCACACCATTGCACTCCAGTCTG...ATGTGACCAGAGCCCCAGGACATCGTTCCTTAGCCAGCTGCTCCGTTGTTGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508775.6
CDS-3UTR CCA 90 bp CGACACCTACTTTCTCACCGTCCCATCTGCCTGGTAAACCTTTGTCTCTCTCTGGCAGGCACCTTCCACTaGGACCAGTGCTGCATTCTC +
Preference number: 4 (lower is better)
Translates to: RHLLSHRPICLVNLCLSLAGTFH*DQCCIL
Trigger: GAGAATGCAGCACTGGTCCCAGTGGAAGGTGCCTGC...CAGAGAGAGACAAAGGTTTACCAGGCAGATGGGACGGTGAGAAAGTAGGTGTCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508775.6
CDS-3UTR TCA 90 bp GAGAGCTCCTTTCTCCCCGTGTACGCCACATGCACTCACTCTACAGGGACCACACTGATAAGAAGGAAGTaGGGCCTGACAGAAACTGAC +
Preference number: 4 (lower is better)
Translates to: ESSFLPVYATCTHSTGTTLIRRK*GLTETD
Trigger: GTCAGTTTCTGTCAGGCCTCACTTCCTTCTTATCAG...TGTGGTCCCTGTAGAGTGAGTGCATGTGGCGTACACGGGGAGAAAGGAGCTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508775.6
CDS-3UTR TCA 90 bp CACCATAAGTTCCACTCATCCCTGTGGCCTAGTCCACGGGTCCTCTTTTCCATGGCAGTCTGCCTGACGTaGGAGCCATGTCATCACATA +
Preference number: 4 (lower is better)
Translates to: HHKFHSSLWPSPRVLFSMAVCLT*EPCHHI
Trigger: TATGTGATGACATGGCTCTCACGTCAGGCAGACTGC...CATGGAAAAGAGGACCCGTGGACTAGGCCACAGGGATGAGTGGAACTTATGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508775.6
CDS-3UTR TCA 90 bp GCTCTCCATCCTGAGATGCGCCTGCTCCTTTGTCCCCCTGGGAGACACTTGTACTCTGATCTCCATCACTaGACCTTAAACGCAGAGTCT +
Preference number: 4 (lower is better)
Translates to: ALHPEMRLLLCPPGRHLYSDLHH*TLNAES
Trigger: AGACTCTGCGTTTAAGGTTCAGTGATGGAGATCAGA...GTACAAGTGTCTCCCAGGGGGACAAAGGAGCAGGCGCATCTCAGGATGGAGAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000508775.6
CDS-3UTR TCA 90 bp CACCATAAGTTCCACTCATCCCTGTGGCCTAGTCCACGGGTCCTCTTTTCCATGGGATTGCTTTCCAGGTaGCAAAGCATTGTCCCCTCC +
Preference number: 4 (lower is better)
Translates to: HHKFHSSLWPSPRVLFSMGLLSR*QSIVPS
Trigger: GGAGGGGACAATGCTTTGTCACCTGGAAAGCAATCC...CATGGAAAAGAGGACCCGTGGACTAGGCCACAGGGATGAGTGGAACTTATGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508775.6
CDS-3UTR TCA 90 bp TGCCACATTGTCCGCATCTACACTGTACGGCCCTCCCCTGTGCCATCCAGCTGGAGACTCCAATCAACCTaGATAGAGTCCACTCAAATG +
Preference number: 4 (lower is better)
Translates to: CHIVRIYTVRPSPVPSSWRLQST*IESTQM
Trigger: CATTTGAGTGGACTCTATTCAGGTTGATTGGAGTCT...CCAGCTGGATGGCACAGGGGAGGGCCGTACAGTGTAGATGCGGACAATGTGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508775.6
CDS-3UTR GCA 90 bp TGTCCAAAGCCGCACAACACAGGAGTAAACCCTAATGTTAATGCTAAACTTTATCCAGCTCCTCCACGCTaGAGCCGCCGTCCGCCCACG +
Preference number: 4 (lower is better)
Translates to: CPKPHNTGVNPNVNAKLYPAPPR*SRRPPT
Trigger: CGTGGGCGGACGGCGGCTGCAGCGTGGAGGAGCTGG...ATAAAGTTTAGCATTAACATTAGGGTTTACTCCTGTGTTGTGCGGCTTTGGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421787.5
CDS-3UTR GCA 90 bp TCGAGTCATGAAAAGACACTGGAGGAACTGCAAACATACATTGCTAAGTGCAAGCTGCGGAGAGAACGCTaGCAGCTGCCGCTCCGGCTC +
Preference number: 4 (lower is better)
Translates to: SSHEKTLEELQTYIAKCKLRRER*QLPLRL
Trigger: GAGCCGGAGCGGCAGCTGGCAGCGTTCTCTCCGCAG...CTTGCACTTAGCAATGTATGTTTGCAGTTCCTCCAGTGTCTTTTCATGACTCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421787.5
CDS-3UTR GCA 90 bp CGGCTGCTCCAGAGCACACTGGGTGGGACTTGCTCTCCTGCATTTGTCCAAAGCTGCAAGAAGCCAGTCTaGAGAGGCTACATACTGTAT +
Preference number: 4 (lower is better)
Translates to: RLLQSTLGGTCSPAFVQSCKKPV*RGYILY
Trigger: ATACAGTATGTAGCCTCTGCAGACTGGCTTCTTGCA...GCTTTGGACAAATGCAGGAGAGCAAGTCCCACCCAGTGTGCTCTGGAGCAGCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421787.5
CDS-3UTR GCA 90 bp TGCCACATTGTCCGCATCTACACTGTACGGCCCTCCCCTGTGCCATCCAGCTGGAAACAAATCCTGCCCTaGCAAGCCAACAGAAAAACA +
Preference number: 4 (lower is better)
Translates to: CHIVRIYTVRPSPVPSSWKQILP*QANRKT
Trigger: TGTTTTTCTGTTGGCTTGGCAGGGCAGGATTTGTTT...CCAGCTGGATGGCACAGGGGAGGGCCGTACAGTGTAGATGCGGACAATGTGGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000508775.6
CDS-3UTR GCA 90 bp CTCCAACAACGGAGCAGCTGGCTAAGGAACGATGTCCTGGGGCTCTGGTCACATCTTGGAGAGAGGGATTaGTTTCCAGGTGACAAAGCA +
Preference number: 4 (lower is better)
Translates to: LQQRSSWLRNDVLGLWSHLGERD*FPGDKA
Trigger: TGCTTTGTCACCTGGAAAGCAATCCCTCTCTCCAAG...ATGTGACCAGAGCCCCAGGACATCGTTCCTTAGCCAGCTGCTCCGTTGTTGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508775.6
CDS-3UTR GCA 90 bp TGCAGAAGAGGGCTCAGCTCCTCCATTACAGAAGAGACAAAATACAGGGACTGCGTGGCACAAACACGGTaGCAGCGTCCAGCACTGACA +
Preference number: 4 (lower is better)
Translates to: CRRGLSSSITEETKYRDCVAQTR*QRPALT
Trigger: TGTCAGTGCTGGACGCTGGCACCGTGTTTGTGCCAC...GCAGTCCCTGTATTTTGTCTCTTCTGTAATGGAGGAGCTGAGCCCTCTTCTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508775.6
CDS-3UTR GCA 90 bp CATGGAGCACAGAAGCGAGTTGGACAAAGTCCGGGCCTTTGTAGTGTGACGTGGAGAGCCACCCAGGACTaGAAAAGAACTCTTAACGGC +
Preference number: 4 (lower is better)
Translates to: HGAQKRVGQSPGLCSVTWRATQD*KRTLNG
Trigger: GCCGTTAAGAGTTCTTTTGCAGTCCTGGGTGGCTCT...CCACGTCACACTACAAAGGCCCGGACTTTGTCCAACTCGCTTCTGTGCTCCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508775.6
CDS-3UTR GCA 90 bp CACCATAAGTTCCACTCATCCCTGTGGCCTAGTCCACGGGTCCTCTTTTCCATGTGCCTCAGACACAGGTaGACTCATGGAGCACAGAAG +
Preference number: 4 (lower is better)
Translates to: HHKFHSSLWPSPRVLFSMCLRHR*THGAQK
Trigger: CTTCTGTGCTCCATGAGTGCACCTGTGTCTGAGGCA...CATGGAAAAGAGGACCCGTGGACTAGGCCACAGGGATGAGTGGAACTTATGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508775.6
CDS-3UTR CCA 90 bp CGACACCTACTTTCTCACCGTCCCATCTGCCTGGTAAACCTTTGTCTCTCTCTGGGGTCCTCTTTTCCATaGTGCCGCAGAGATGCTCCA +
Preference number: 4 (lower is better)
Translates to: RHLLSHRPICLVNLCLSLGSSFP*CRRDAP
Trigger: TGGAGCATCTCTGCGGCACCATGGAAAAGAGGACCC...CAGAGAGAGACAAAGGTTTACCAGGCAGATGGGACGGTGAGAAAGTAGGTGTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508775.6
CDS-3UTR TCA 90 bp GCTCTCCATCCTGAGATGCGCCTGCTCCTTTGTCCCCCTGGGAGACACTTGTACTCATTTAAAGGACTCTaGGGCTTAAGAGTCCAACTC +
Preference number: 4 (lower is better)
Translates to: ALHPEMRLLLCPPGRHLYSFKGL*GLRVQL
Trigger: GAGTTGGACTCTTAAGCCTCAGAGTCCTTTAAATGA...GTACAAGTGTCTCCCAGGGGGACAAAGGAGCAGGCGCATCTCAGGATGGAGAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000508775.6
CDS-3UTR TCA 90 bp CGACACCTACTTTCTCACCGTCCCATCTGCCTGGTAAACCTTTGTCTCTCTCTGACTGCAGACAGCCTCTaGAGAGCTGCTTTCCTTGAC +
Preference number: 4 (lower is better)
Translates to: RHLLSHRPICLVNLCLSLTADSL*RAAFLD
Trigger: GTCAAGGAAAGCAGCTCTTCAGAGGCTGTCTGCAGT...CAGAGAGAGACAAAGGTTTACCAGGCAGATGGGACGGTGAGAAAGTAGGTGTCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508775.6
CDS-3UTR TCA 90 bp GCTCTCCATCCTGAGATGCGCCTGCTCCTTTGTCCCCCTGGGAGACACTTGTACAGAGTTGCATCTTCCTaGGTTGAATCTGGAAAATGC +
Preference number: 4 (lower is better)
Translates to: ALHPEMRLLLCPPGRHLYRVASS*VESGKC
Trigger: GCATTTTCCAGATTCAACTCAGGAAGATGCAACTCT...GTACAAGTGTCTCCCAGGGGGACAAAGGAGCAGGCGCATCTCAGGATGGAGAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000508775.6
CDS-3UTR TCA 90 bp GACACACTCAAAAAGCGCGGTGATCTGAGTTATAGTAAAGCCTGTTTCGTTGGTCAGGGCAGGAGGGATTaGGGGAATGTCCCTGAGCCG +
Preference number: 4 (lower is better)
Translates to: DTLKKRGDLSYSKACFVGQGRRD*GNVPEP
Trigger: CGGCTCAGGGACATTCCCTCAATCCCTCCTGCCCTG...ACCAACGAAACAGGCTTTACTATAACTCAGATCACCGCGCTTTTTGAGTGTGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000508775.6
CDS-3UTR TCA 90 bp GCTCTCCATCCTGAGATGCGCCTGCTCCTTTGTCCCCCTGGGAGACACTTGTACCACAGGTCTGAAATGTaGAAAGCACGTCAGCATAAA +
Preference number: 4 (lower is better)
Translates to: ALHPEMRLLLCPPGRHLYHRSEM*KARQHK
Trigger: TTTATGCTGACGTGCTTTTCACATTTCAGACCTGTG...GTACAAGTGTCTCCCAGGGGGACAAAGGAGCAGGCGCATCTCAGGATGGAGAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000508775.6
CDS-3UTR GCA 90 bp TCGAGTCATGAAAAGACACTGGAGGAACTGCAAACATACATTGCTAAGTGCAAGCTGCAGGGCGCATGGTaGCGACCTGCGGAGAGAACG +
Preference number: 4 (lower is better)
Translates to: SSHEKTLEELQTYIAKCKLQGAW*RPAERT
Trigger: CGTTCTCTCCGCAGGTCGGCACCATGCGCCCTGCAG...CTTGCACTTAGCAATGTATGTTTGCAGTTCCTCCAGTGTCTTTTCATGACTCGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421787.5
CDS-3UTR GCA 90 bp CATGGAGCACAGAAGCGAGTTGGACAAAGTCCGGGCCTTTGTAGTGTGACGTGGTACGTCAGGCCAGTATaGCCTCATTTCTGGCAAAAG +
Preference number: 4 (lower is better)
Translates to: HGAQKRVGQSPGLCSVTWYVRPV*PHFWQK
Trigger: CTTTTGCCAGAAATGAGGGCATACTGGCCTGACGTA...CCACGTCACACTACAAAGGCCCGGACTTTGTCCAACTCGCTTCTGTGCTCCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508775.6
CDS-3UTR GCA 90 bp CATGGAGCACAGAAGCGAGTTGGACAAAGTCCGGGCCTTTGTAGTGTGACGTGGAATTCCAAGTATGCCTaGCTGATCTACCAGGGCACT +
Preference number: 4 (lower is better)
Translates to: HGAQKRVGQSPGLCSVTWNSKYA*LIYQGT
Trigger: AGTGCCCTGGTAGATCAGGCAGGCATACTTGGAATT...CCACGTCACACTACAAAGGCCCGGACTTTGTCCAACTCGCTTCTGTGCTCCATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508775.6
CDS-3UTR GCA 90 bp TCCCAAGCACAAAACAGCCACTCAGGCGTGGGAGAGCTCCTTTCTCCCCGTGTAAGTCCCCTGAATCGGTaGCATCTGTCTAAATTCCAA +
Preference number: 4 (lower is better)
Translates to: SQAQNSHSGVGELLSPRVSPLNR*HLSKFQ
Trigger: TTGGAATTTAGACAGATGGCACCGATTCAGGGGACT...TACACGGGGAGAAAGGAGCTCTCCCACGCCTGAGTGGCTGTTTTGTGCTTGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000508775.6
CDS-3UTR GCA 90 bp TGCCACATTGTCCGCATCTACACTGTACGGCCCTCCCCTGTGCCATCCAGCTGGAGAGAGCCAAGCATTTaGTTGTGCTCATGTTTTGAA +
Preference number: 4 (lower is better)
Translates to: CHIVRIYTVRPSPVPSSWREPSI*LCSCFE
Trigger: TTCAAAACATGAGCACAAGCAAATGCTTGGCTCTCT...CCAGCTGGATGGCACAGGGGAGGGCCGTACAGTGTAGATGCGGACAATGTGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508775.6
CDS-3UTR GCA 90 bp CGACACCTACTTTCTCACCGTCCCATCTGCCTGGTAAACCTTTGTCTCTCTCTGAGTGATTCATTCTCCTaGCTCAGCCTCCCGAGTAGC +
Preference number: 4 (lower is better)
Translates to: RHLLSHRPICLVNLCLSLSDSFS*LSLPSS
Trigger: GCTACTCGGGAGGCTGAGGCAGGAGAATGAATCACT...CAGAGAGAGACAAAGGTTTACCAGGCAGATGGGACGGTGAGAAAGTAGGTGTCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508775.6
CDS-3UTR GCA 90 bp TGCAGAAGAGGGCTCAGCTCCTCCATTACAGAAGAGACAAAATACAGGGACTGCGTGATTTCGGCTCACTaGAACCTCTGCCTCCTGGCT +
Preference number: 4 (lower is better)
Translates to: CRRGLSSSITEETKYRDCVISAH*NLCLLA
Trigger: AGCCAGGAGGCAGAGGTTGCAGTGAGCCGAAATCAC...GCAGTCCCTGTATTTTGTCTCTTCTGTAATGGAGGAGCTGAGCCCTCTTCTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508775.6
CDS-3UTR CCA 90 bp CGACACCTACTTTCTCACCGTCCCATCTGCCTGGTAAACCTTTGTCTCTCTCTGCAACAACGGAGCAGCTaGCTAAGGAACGATGTCCTG +
Preference number: 4 (lower is better)
Translates to: RHLLSHRPICLVNLCLSLQQRSS*LRNDVL
Trigger: CAGGACATCGTTCCTTAGCCAGCTGCTCCGTTGTTG...CAGAGAGAGACAAAGGTTTACCAGGCAGATGGGACGGTGAGAAAGTAGGTGTCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508775.6
CDS-3UTR CCA 90 bp CGACACCTACTTTCTCACCGTCCCATCTGCCTGGTAAACCTTTGTCTCTCTCTGGGGTACCTCCGGTTCTaGAACACACAATGTAGGCAC +
Preference number: 4 (lower is better)
Translates to: RHLLSHRPICLVNLCLSLGYLRF*NTQCRH
Trigger: GTGCCTACATTGTGTGTTCCAGAACCGGAGGTACCC...CAGAGAGAGACAAAGGTTTACCAGGCAGATGGGACGGTGAGAAAGTAGGTGTCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508775.6
CDS-3UTR CCA 90 bp TGCAGAAGAGGGCTCAGCTCCTCCATTACAGAAGAGACAAAATACAGGGACTGCAGGATGCTACCTTGTTaGCGTCCCCATCCGCTCTCA +
Preference number: 4 (lower is better)
Translates to: CRRGLSSSITEETKYRDCRMLPC*RPHPLS
Trigger: TGAGAGCGGATGGGGACGCCAACAAGGTAGCATCCT...GCAGTCCCTGTATTTTGTCTCTTCTGTAATGGAGGAGCTGAGCCCTCTTCTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508775.6
CDS-3UTR TCA 90 bp CGGCTGCTCCAGAGCACACTGGGTGGGACTTGCTCTCCTGCATTTGTCCAAAGCATGATTCCAACGACGTaGCAATTTGGAAAAGGTAGT +
Preference number: 4 (lower is better)
Translates to: RLLQSTLGGTCSPAFVQSMIPTT*QFGKGS
Trigger: ACTACCTTTTCCAAATTGTCACGTCGTTGGAATCAT...GCTTTGGACAAATGCAGGAGAGCAAGTCCCACCCAGTGTGCTCTGGAGCAGCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421787.5
CDS-3UTR TCA 90 bp CGGCTGCTCCAGAGCACACTGGGTGGGACTTGCTCTCCTGCATTTGTCCAAAGCACAAGCTGTTATAGGTaGAGGGATAAAGTGTACATC +
Preference number: 4 (lower is better)
Translates to: RLLQSTLGGTCSPAFVQSTSCYR*RDKVYI
Trigger: GATGTACACTTTATCCCTTCACCTATAACAGCTTGT...GCTTTGGACAAATGCAGGAGAGCAAGTCCCACCCAGTGTGCTCTGGAGCAGCCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421787.5
CDS-3UTR TCA 90 bp TGCAGAAGAGGGCTCAGCTCCTCCATTACAGAAGAGACAAAATACAGGGACTGCAGCAAGAGAGTCCCCTaGATCGGTGCCATCTGTCTA +
Preference number: 4 (lower is better)
Translates to: CRRGLSSSITEETKYRDCSKRVP*IGAICL
Trigger: TAGACAGATGGCACCGATTCAGGGGACTCTCTTGCT...GCAGTCCCTGTATTTTGTCTCTTCTGTAATGGAGGAGCTGAGCCCTCTTCTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508775.6
CDS-3UTR TCA 90 bp CATGGAGCACAGAAGCGAGTTGGACAAAGTCCGGGCCTTTGTAGTGTGACGTGGGTAGACACCATGAAGTaGGGTTTTGGTTTGAGCCAA +
Preference number: 4 (lower is better)
Translates to: HGAQKRVGQSPGLCSVTWVDTMK*GFGLSQ
Trigger: TTGGCTCAAACCAAAACCTCACTTCATGGTGTCTAC...CCACGTCACACTACAAAGGCCCGGACTTTGTCCAACTCGCTTCTGTGCTCCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508775.6
CDS-3UTR TCA 90 bp CTCCAACAACGGAGCAGCTGGCTAAGGAACGATGTCCTGGGGCTCTGGTCACATACCTTTGTCTCTCTCTaGACATTCTGCATTTCAGAC +
Preference number: 4 (lower is better)
Translates to: LQQRSSWLRNDVLGLWSHTFVSL*TFCISD
Trigger: GTCTGAAATGCAGAATGTTCAGAGAGAGACAAAGGT...ATGTGACCAGAGCCCCAGGACATCGTTCCTTAGCCAGCTGCTCCGTTGTTGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508775.6
CDS-3UTR TCA 90 bp GCTCTCCATCCTGAGATGCGCCTGCTCCTTTGTCCCCCTGGGAGACACTTGTACGCTCATAGGAAGGGTTaGAAAAAGTGTGGAATGAAT +
Preference number: 4 (lower is better)
Translates to: ALHPEMRLLLCPPGRHLYAHRKG*KKCGMN
Trigger: ATTCATTCCACACTTTTTTCAACCCTTCCTATGAGC...GTACAAGTGTCTCCCAGGGGGACAAAGGAGCAGGCGCATCTCAGGATGGAGAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000508775.6
CDS-3UTR TCA 90 bp CACCATAAGTTCCACTCATCCCTGTGGCCTAGTCCACGGGTCCTCTTTTCCATGGCGGGTAGGAAAAGGTaGTTGTGTAATTCTTGCTCC +
Preference number: 4 (lower is better)
Translates to: HHKFHSSLWPSPRVLFSMAGRKR*LCNSCS
Trigger: GGAGCAAGAATTACACAATCACCTTTTCCTACCCGC...CATGGAAAAGAGGACCCGTGGACTAGGCCACAGGGATGAGTGGAACTTATGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508775.6
CDS-3UTR TCA 90 bp CTCCAACAACGGAGCAGCTGGCTAAGGAACGATGTCCTGGGGCTCTGGTCACATTCTTTGGGCCACTGCTaGCTATCTTTTCTCAATTCA +
Preference number: 4 (lower is better)
Translates to: LQQRSSWLRNDVLGLWSHSLGHC*LSFLNS
Trigger: TGAATTGAGAAAAGATAGTCAGCAGTGGCCCAAAGA...ATGTGACCAGAGCCCCAGGACATCGTTCCTTAGCCAGCTGCTCCGTTGTTGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508775.6
CDS-3UTR GCA 90 bp TCGAGTCATGAAAAGACACTGGAGGAACTGCAAACATACATTGCTAAGTGCAAGTCCCCTTCAGGATCGTaGACCAAGCGCGCACGTCCC +
Preference number: 4 (lower is better)
Translates to: SSHEKTLEELQTYIAKCKSPSGS*TKRARP
Trigger: GGGACGTGCGCGCTTGGTGCACGATCCTGAAGGGGA...CTTGCACTTAGCAATGTATGTTTGCAGTTCCTCCAGTGTCTTTTCATGACTCGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421787.5
CDS-3UTR GCA 90 bp TCGAGTCATGAAAAGACACTGGAGGAACTGCAAACATACATTGCTAAGTGCAAGCCACTTCCCACCTGCTaGCCGAGGAAGACTTCCGGG +
Preference number: 4 (lower is better)
Translates to: SSHEKTLEELQTYIAKCKPLPTC*PRKTSG
Trigger: CCCGGAAGTCTTCCTCGGGCAGCAGGTGGGAAGTGG...CTTGCACTTAGCAATGTATGTTTGCAGTTCCTCCAGTGTCTTTTCATGACTCGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421787.5
CDS-3UTR GCA 90 bp CACCATAAGTTCCACTCATCCCTGTGGCCTAGTCCACGGGTCCTCTTTTCCATGGAGACAGGAGATGGCTaGTCTGTGAATACACCCAAA +
Preference number: 4 (lower is better)
Translates to: HHKFHSSLWPSPRVLFSMETGDG*SVNTPK
Trigger: TTTGGGTGTATTCACAGAGCAGCCATCTCCTGTCTC...CATGGAAAAGAGGACCCGTGGACTAGGCCACAGGGATGAGTGGAACTTATGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508775.6
CDS-3UTR GCA 90 bp TGCAGAAGAGGGCTCAGCTCCTCCATTACAGAAGAGACAAAATACAGGGACTGCTGCAGCCACTGTCTCTaGTGTCCAGTCCTCACCTAT +
Preference number: 4 (lower is better)
Translates to: CRRGLSSSITEETKYRDCCSHCL*CPVLTY
Trigger: ATAGGTGAGGACTGGACAGCAGAGACAGTGGCTGCA...GCAGTCCCTGTATTTTGTCTCTTCTGTAATGGAGGAGCTGAGCCCTCTTCTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508775.6
CDS-3UTR GCA 90 bp TGCAGAAGAGGGCTCAGCTCCTCCATTACAGAAGAGACAAAATACAGGGACTGCCCACAGATCCTTCCCTaGAGTTGCTGTCTCCCTTTC +
Preference number: 4 (lower is better)
Translates to: CRRGLSSSITEETKYRDCPQILP*SCCLPF
Trigger: GAAAGGGAGACAGCAACTGCAGGGAAGGATCTGTGG...GCAGTCCCTGTATTTTGTCTCTTCTGTAATGGAGGAGCTGAGCCCTCTTCTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508775.6
CDS-3UTR GCA 90 bp CTCCAACAACGGAGCAGCTGGCTAAGGAACGATGTCCTGGGGCTCTGGTCACATTCTTTTCCAGCCTTCTaGAGTGATAGATCTAGCCAA +
Preference number: 4 (lower is better)
Translates to: LQQRSSWLRNDVLGLWSHSFPAF*SDRSSQ
Trigger: TTGGCTAGATCTATCACTGCAGAAGGCTGGAAAAGA...ATGTGACCAGAGCCCCAGGACATCGTTCCTTAGCCAGCTGCTCCGTTGTTGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508775.6
CDS-3UTR CCA 90 bp TGCAGAAGAGGGCTCAGCTCCTCCATTACAGAAGAGACAAAATACAGGGACTGCACCAGTGCAGGGACCTaGCTACCCTCTGATAAGAAG +
Preference number: 4 (lower is better)
Translates to: CRRGLSSSITEETKYRDCTSAGT*LPSDKK
Trigger: CTTCTTATCAGAGGGTAGCCAGGTCCCTGCACTGGT...GCAGTCCCTGTATTTTGTCTCTTCTGTAATGGAGGAGCTGAGCCCTCTTCTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508775.6
CDS-3UTR CCA 90 bp TGCAGAAGAGGGCTCAGCTCCTCCATTACAGAAGAGACAAAATACAGGGACTGCATTAGCCGGGCATGGTaGCATATGCCACCACTCTTG +
Preference number: 4 (lower is better)
Translates to: CRRGLSSSITEETKYRDCISRAW*HMPPLL
Trigger: CAAGAGTGGTGGCATATGCCACCATGCCCGGCTAAT...GCAGTCCCTGTATTTTGTCTCTTCTGTAATGGAGGAGCTGAGCCCTCTTCTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508775.6
3UTR CAA 72 bp CTCCGCCCAGTTACAGCGAGAACCGTGTGGTCAGAGTaGCATCTTCCTGAGTTGAATCTGGAAAATGCACGA +
Preference number: 4 (lower is better)
Translates to: LRPVTARTVWSE*HLPELNLENAR
Trigger: TCGTGCATTTTCCAGATTCAACTCAGGAAGATGCAACTCTGACCACACGGTTCTCGCTGTAACTGGGCGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508775.6
CDS-3UTR TCA 90 bp CATGGAGCACAGAAGCGAGTTGGACAAAGTCCGGGCCTTTGTAGTGTGACGTGGATAAAACCCAAGCCTTaGTCCCTGTGTTCGCAAAAT +
Preference number: 4 (lower is better)
Translates to: HGAQKRVGQSPGLCSVTWIKPKP*SLCSQN
Trigger: ATTTTGCGAACACAGGGATCAAGGCTTGGGTTTTAT...CCACGTCACACTACAAAGGCCCGGACTTTGTCCAACTCGCTTCTGTGCTCCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508775.6
CDS-3UTR TCA 90 bp GACACACTCAAAAAGCGCGGTGATCTGAGTTATAGTAAAGCCTGTTTCGTTGGTCTCACCTCAGCCTCCTaGGTAGCTGGGATTGCAGAC +
Preference number: 4 (lower is better)
Translates to: DTLKKRGDLSYSKACFVGLTSAS*VAGIAD
Trigger: GTCTGCAATCCCAGCTACTCAGGAGGCTGAGGTGAG...ACCAACGAAACAGGCTTTACTATAACTCAGATCACCGCGCTTTTTGAGTGTGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000508775.6
CDS-3UTR TCA 90 bp CATGGAGCACAGAAGCGAGTTGGACAAAGTCCGGGCCTTTGTAGTGTGACGTGGAAGAATGCACAGGTCTaGAATGTGAAAAGCACGTCA +
Preference number: 4 (lower is better)
Translates to: HGAQKRVGQSPGLCSVTWKNAQV*NVKSTS
Trigger: TGACGTGCTTTTCACATTTCAGACCTGTGCATTCTT...CCACGTCACACTACAAAGGCCCGGACTTTGTCCAACTCGCTTCTGTGCTCCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508775.6
CDS-3UTR TCA 90 bp CACCATAAGTTCCACTCATCCCTGTGGCCTAGTCCACGGGTCCTCTTTTCCATGGTCTCTTCCCATGGCTaGGTCTATTCTGCTCTAAAA +
Preference number: 4 (lower is better)
Translates to: HHKFHSSLWPSPRVLFSMVSSHG*VYSALK
Trigger: TTTTAGAGCAGAATAGACTCAGCCATGGGAAGAGAC...CATGGAAAAGAGGACCCGTGGACTAGGCCACAGGGATGAGTGGAACTTATGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508775.6
CDS-3UTR GCA 90 bp TGTCCAAAGCCGCACAACACAGGAGTAAACCCTAATGTTAATGCTAAACTTTATCGCATGGTGCCGACCTaGGGAGAGAACGCTGCCAGC +
Preference number: 4 (lower is better)
Translates to: CPKPHNTGVNPNVNAKLYRMVPT*GENAAS
Trigger: GCTGGCAGCGTTCTCTCCGCAGGTCGGCACCATGCG...ATAAAGTTTAGCATTAACATTAGGGTTTACTCCTGTGTTGTGCGGCTTTGGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421787.5
CDS-3UTR GCA 90 bp GACACACTCAAAAAGCGCGGTGATCTGAGTTATAGTAAAGCCTGTTTCGTTGGTCCCGTGTACGCCACATaGACTCACTCTACAGGGACC +
Preference number: 4 (lower is better)
Translates to: DTLKKRGDLSYSKACFVGPVYAT*THSTGT
Trigger: GGTCCCTGTAGAGTGAGTGCATGTGGCGTACACGGG...ACCAACGAAACAGGCTTTACTATAACTCAGATCACCGCGCTTTTTGAGTGTGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000508775.6
CDS-3UTR GCA 90 bp GACACACTCAAAAAGCGCGGTGATCTGAGTTATAGTAAAGCCTGTTTCGTTGGTTGGAAAGCTCCTCACTaGACAGCCCCCAGATGCCTC +
Preference number: 4 (lower is better)
Translates to: DTLKKRGDLSYSKACFVGWKAPH*TAPRCL
Trigger: GAGGCATCTGGGGGCTGTGCAGTGAGGAGCTTTCCA...ACCAACGAAACAGGCTTTACTATAACTCAGATCACCGCGCTTTTTGAGTGTGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000508775.6
CDS-3UTR GCA 90 bp GACACACTCAAAAAGCGCGGTGATCTGAGTTATAGTAAAGCCTGTTTCGTTGGTAGCCGACACCTACGATaGGCAGTCCATGTCTCCGCT +
Preference number: 4 (lower is better)
Translates to: DTLKKRGDLSYSKACFVGSRHLR*AVHVSA
Trigger: AGCGGAGACATGGACTGCGCATCGTAGGTGTCGGCT...ACCAACGAAACAGGCTTTACTATAACTCAGATCACCGCGCTTTTTGAGTGTGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000508775.6
CDS-3UTR GCA 90 bp CGACACCTACTTTCTCACCGTCCCATCTGCCTGGTAAACCTTTGTCTCTCTCTGCCTACCAGCATCAAATaGACCAGCTATGCTCCTCTT +
Preference number: 4 (lower is better)
Translates to: RHLLSHRPICLVNLCLSLPTSIK*TSYAPL
Trigger: AAGAGGAGCATAGCTGGTGCATTTGATGCTGGTAGG...CAGAGAGAGACAAAGGTTTACCAGGCAGATGGGACGGTGAGAAAGTAGGTGTCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508775.6
CDS-3UTR CCA 90 bp TGCAGAAGAGGGCTCAGCTCCTCCATTACAGAAGAGACAAAATACAGGGACTGCCCAAAGTACTTCTTCTaGGAGTTGAGCGCATCCACC +
Preference number: 4 (lower is better)
Translates to: CRRGLSSSITEETKYRDCPKYFF*ELSAST
Trigger: GGTGGATGCGCTCAACTCCCAGAAGAAGTACTTTGG...GCAGTCCCTGTATTTTGTCTCTTCTGTAATGGAGGAGCTGAGCCCTCTTCTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508775.6
CDS-3UTR CCA 90 bp GAGAGCTCCTTTCTCCCCGTGTACGCCACATGCACTCACTCTACAGGGACCACAAGTTTCATGGGAACCTaGTTTTCTTGTCTCGCTTTT +
Preference number: 4 (lower is better)
Translates to: ESSFLPVYATCTHSTGTTSFMGT*FSCLAF
Trigger: AAAAGCGAGACAAGAAAACCAGGTTCCCATGAAACT...TGTGGTCCCTGTAGAGTGAGTGCATGTGGCGTACACGGGGAGAAAGGAGCTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508775.6
CDS-3UTR CCA 90 bp TGCAGAAGAGGGCTCAGCTCCTCCATTACAGAAGAGACAAAATACAGGGACTGCGGCCAACCATGGAACTaGGTGTTGATATCCCATGGA +
Preference number: 4 (lower is better)
Translates to: CRRGLSSSITEETKYRDCGQPWN*VLISHG
Trigger: TCCATGGGATATCAACACCCAGTTCCATGGTTGGCC...GCAGTCCCTGTATTTTGTCTCTTCTGTAATGGAGGAGCTGAGCCCTCTTCTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508775.6
CDS-3UTR CCA 90 bp CACCATAAGTTCCACTCATCCCTGTGGCCTAGTCCACGGGTCCTCTTTTCCATGATCACTAGAGAACACTaGCTTAGAGCTGATGTGCCT +
Preference number: 4 (lower is better)
Translates to: HHKFHSSLWPSPRVLFSMITREH*LRADVP
Trigger: AGGCACATCAGCTCTAAGCCAGTGTTCTCTAGTGAT...CATGGAAAAGAGGACCCGTGGACTAGGCCACAGGGATGAGTGGAACTTATGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508775.6
CDS-3UTR CCA 90 bp CGACACCTACTTTCTCACCGTCCCATCTGCCTGGTAAACCTTTGTCTCTCTCTGATAAGCCACTGCGCCTaGCCCATCTCAAACTTTCTA +
Preference number: 4 (lower is better)
Translates to: RHLLSHRPICLVNLCLSLISHCA*PISNFL
Trigger: TAGAAAGTTTGAGATGGGCCAGGCGCAGTGGCTTAT...CAGAGAGAGACAAAGGTTTACCAGGCAGATGGGACGGTGAGAAAGTAGGTGTCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508775.6
CDS-3UTR CCA 90 bp TGTGATTGTATCCTGGTAATTTCATTTCAGGAGCTAGAGCTTGTGAGGAAAAGTGCCCAGGCTGGAGGGTaGAGCGCAGTGGCGCAATCT +
Preference number: 4 (lower is better)
Translates to: CDCILVISFQELELVRKSAQAGG*SAVAQS
Trigger: AGATTGCGCCACTGCGCTCCACCCTCCAGCCTGGGC...ACTTTTCCTCACAAGCTCTAGCTCCTGAAATGAAATTACCAGGATACAATCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508775.6
CDS-3UTR CCA 90 bp TGCAGAAGAGGGCTCAGCTCCTCCATTACAGAAGAGACAAAATACAGGGACTGCCAAGCCCCTGAATATTaGGAGCATCTTGGTGACTGG +
Preference number: 4 (lower is better)
Translates to: CRRGLSSSITEETKYRDCQAPEY*EHLGDW
Trigger: CCAGTCACCAAGATGCTCCCAATATTCAGGGGCTTG...GCAGTCCCTGTATTTTGTCTCTTCTGTAATGGAGGAGCTGAGCCCTCTTCTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508775.6
3UTR CAA 72 bp CAACCACCAAAGCTGTACACGCCAGGTTCAATGTCTTaGCTGGTAAAAATGGGCCACTGTCACTCTGCAGAC +
Preference number: 4 (lower is better)
Translates to: QPPKLYTPGSMS*LVKMGHCHSAD
Trigger: GTCTGCAGAGTGACAGTGGCCCATTTTTACCAGCAAAGACATTGAACCTGGCGTGTACAGCTTTGGTGGTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000508775.6
CDS-3UTR TCA 90 bp GACACACTCAAAAAGCGCGGTGATCTGAGTTATAGTAAAGCCTGTTTCGTTGGTCCAAGTATGCCTGCCTaGTCTACCAGGGCACTGAAG +
Preference number: 4 (lower is better)
Translates to: DTLKKRGDLSYSKACFVGPSMPA*STRALK
Trigger: CTTCAGTGCCCTGGTAGATCAGGCAGGCATACTTGG...ACCAACGAAACAGGCTTTACTATAACTCAGATCACCGCGCTTTTTGAGTGTGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000508775.6
CDS-3UTR TCA 90 bp CGACACCTACTTTCTCACCGTCCCATCTGCCTGGTAAACCTTTGTCTCTCTCTGACATGTGCTTGGATCTaGTCTCCATCACTGAACCTT +
Preference number: 4 (lower is better)
Translates to: RHLLSHRPICLVNLCLSLTCAWI*SPSLNL
Trigger: AAGGTTCAGTGATGGAGATCAGATCCAAGCACATGT...CAGAGAGAGACAAAGGTTTACCAGGCAGATGGGACGGTGAGAAAGTAGGTGTCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508775.6
CDS-3UTR TCA 90 bp CGACACCTACTTTCTCACCGTCCCATCTGCCTGGTAAACCTTTGTCTCTCTCTGTGCATCTTCCTGAGTTaGATCTGGAAAATGCACGAC +
Preference number: 4 (lower is better)
Translates to: RHLLSHRPICLVNLCLSLCIFLS*IWKMHD
Trigger: GTCGTGCATTTTCCAGATTCAACTCAGGAAGATGCA...CAGAGAGAGACAAAGGTTTACCAGGCAGATGGGACGGTGAGAAAGTAGGTGTCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508775.6
CDS-3UTR GCA 90 bp CGACACCTACTTTCTCACCGTCCCATCTGCCTGGTAAACCTTTGTCTCTCTCTGTCTAAATTCCAAGTATaGCTGCCTGATCTACCAGGG +
Preference number: 4 (lower is better)
Translates to: RHLLSHRPICLVNLCLSLSKFQV*LPDLPG
Trigger: CCCTGGTAGATCAGGCAGGCATACTTGGAATTTAGA...CAGAGAGAGACAAAGGTTTACCAGGCAGATGGGACGGTGAGAAAGTAGGTGTCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508775.6
CDS-3UTR GCA 90 bp CACCATAAGTTCCACTCATCCCTGTGGCCTAGTCCACGGGTCCTCTTTTCCATGACAAAATACAGGGACTaGTTCCATCAAATCCCCCAT +
Preference number: 4 (lower is better)
Translates to: HHKFHSSLWPSPRVLFSMTKYRD*FHQIPH
Trigger: ATGGGGGATTTGATGGAAGCAGTCCCTGTATTTTGT...CATGGAAAAGAGGACCCGTGGACTAGGCCACAGGGATGAGTGGAACTTATGGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000508775.6
CDS-3UTR GCA 90 bp GACACACTCAAAAAGCGCGGTGATCTGAGTTATAGTAAAGCCTGTTTCGTTGGTTCTAGGCATTCTCCCTaGCGTCTAGCCCAAAACCGG +
Preference number: 4 (lower is better)
Translates to: DTLKKRGDLSYSKACFVGSRHSP*RLAQNR
Trigger: CCGGTTTTGGGCTAGACGGCAGGGAGAATGCCTAGA...ACCAACGAAACAGGCTTTACTATAACTCAGATCACCGCGCTTTTTGAGTGTGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000508775.6
CDS-3UTR GCA 90 bp TGCAGAAGAGGGCTCAGCTCCTCCATTACAGAAGAGACAAAATACAGGGACTGCGAAAACCCTCACTACTaGCCCTTCTATGGGAAACGT +
Preference number: 4 (lower is better)
Translates to: CRRGLSSSITEETKYRDCENPHY*PFYGKR
Trigger: ACGTTTCCCATAGAAGGGGCAGTAGTGAGGGTTTTC...GCAGTCCCTGTATTTTGTCTCTTCTGTAATGGAGGAGCTGAGCCCTCTTCTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508775.6
CDS-3UTR GCA 90 bp TGCAGAAGAGGGCTCAGCTCCTCCATTACAGAAGAGACAAAATACAGGGACTGCGGGCCACTGTCACTCTaGAGACTTTTCTCAGTGTTA +
Preference number: 4 (lower is better)
Translates to: CRRGLSSSITEETKYRDCGPLSL*RLFSVL
Trigger: TAACACTGAGAAAAGTCTGCAGAGTGACAGTGGCCC...GCAGTCCCTGTATTTTGTCTCTTCTGTAATGGAGGAGCTGAGCCCTCTTCTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508775.6
CDS-3UTR GCA 90 bp GAGAGCTCCTTTCTCCCCGTGTACGCCACATGCACTCACTCTACAGGGACCACATGGCTGAGTCTATTCTaGTCTAAAACATTCAGAGAA +
Preference number: 4 (lower is better)
Translates to: ESSFLPVYATCTHSTGTTWLSLF*SKTFRE
Trigger: TTCTCTGAATGTTTTAGAGCAGAATAGACTCAGCCA...TGTGGTCCCTGTAGAGTGAGTGCATGTGGCGTACACGGGGAGAAAGGAGCTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508775.6
CDS-3UTR GCA 90 bp CACCATAAGTTCCACTCATCCCTGTGGCCTAGTCCACGGGTCCTCTTTTCCATGTTGATTTCCAGGAATTaGCATAGGCTAGAGTCTCAG +
Preference number: 4 (lower is better)
Translates to: HHKFHSSLWPSPRVLFSMLISRN*HRLESQ
Trigger: CTGAGACTCTAGCCTATGGCAATTCCTGGAAATCAA...CATGGAAAAGAGGACCCGTGGACTAGGCCACAGGGATGAGTGGAACTTATGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508775.6
CDS-3UTR CCA 90 bp TGTCCAAAGCCGCACAACACAGGAGTAAACCCTAATGTTAATGCTAAACTTTATGTGCGCCCGGAGCCCTaGGACGGCCTAAACCAGTAT +
Preference number: 4 (lower is better)
Translates to: CPKPHNTGVNPNVNAKLYVRPEP*DGLNQY
Trigger: ATACTGGTTTAGGCCGTCCCAGGGCTCCGGGCGCAC...ATAAAGTTTAGCATTAACATTAGGGTTTACTCCTGTGTTGTGCGGCTTTGGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421787.5
CDS-3UTR CCA 90 bp TCGAGTCATGAAAAGACACTGGAGGAACTGCAAACATACATTGCTAAGTGCAAGTGCTCCAGAGCACACTaGGTGGGACTTGCTCTCCTG +
Preference number: 4 (lower is better)
Translates to: SSHEKTLEELQTYIAKCKCSRAH*VGLALL
Trigger: CAGGAGAGCAAGTCCCACCCAGTGTGCTCTGGAGCA...CTTGCACTTAGCAATGTATGTTTGCAGTTCCTCCAGTGTCTTTTCATGACTCGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421787.5
CDS-3UTR CCA 90 bp TCGAGTCATGAAAAGACACTGGAGGAACTGCAAACATACATTGCTAAGTGCAAGGAAGAAGGGGAGGTATaGCTCAGGGGGTTTAGGGCC +
Preference number: 4 (lower is better)
Translates to: SSHEKTLEELQTYIAKCKEEGEV*LRGFRA
Trigger: GGCCCTAAACCCCCTGAGCCATACCTCCCCTTCTTC...CTTGCACTTAGCAATGTATGTTTGCAGTTCCTCCAGTGTCTTTTCATGACTCGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000421787.5
CDS-3UTR TCA 90 bp CACCATAAGTTCCACTCATCCCTGTGGCCTAGTCCACGGGTCCTCTTTTCCATGAAATATTTCACGTGTTaGACACAATGCCTGGCACAT +
Preference number: 4 (lower is better)
Translates to: HHKFHSSLWPSPRVLFSMKYFTC*TQCLAH
Trigger: ATGTGCCAGGCATTGTGTTCAACACGTGAAATATTT...CATGGAAAAGAGGACCCGTGGACTAGGCCACAGGGATGAGTGGAACTTATGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508775.6
CDS-3UTR TCA 90 bp CGACACCTACTTTCTCACCGTCCCATCTGCCTGGTAAACCTTTGTCTCTCTCTGAAAAGCGCGGTGATCTaGGTTATAGTAAAGCCTGTT +
Preference number: 4 (lower is better)
Translates to: RHLLSHRPICLVNLCLSLKSAVI*VIVKPV
Trigger: AACAGGCTTTACTATAACTCAGATCACCGCGCTTTT...CAGAGAGAGACAAAGGTTTACCAGGCAGATGGGACGGTGAGAAAGTAGGTGTCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508775.6
CDS-3UTR GCA 90 bp TGTCCAAAGCCGCACAACACAGGAGTAAACCCTAATGTTAATGCTAAACTTTATTTTAGGGCCAGCGGCTaGTCCAGAGCACACTGGGTG +
Preference number: 4 (lower is better)
Translates to: CPKPHNTGVNPNVNAKLYFRASG*SRAHWV
Trigger: CACCCAGTGTGCTCTGGAGCAGCCGCTGGCCCTAAA...ATAAAGTTTAGCATTAACATTAGGGTTTACTCCTGTGTTGTGCGGCTTTGGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421787.5
CDS-3UTR GCA 90 bp GACACACTCAAAAAGCGCGGTGATCTGAGTTATAGTAAAGCCTGTTTCGTTGGTAGGACGCAGAGCAAATaGAGGAAATCACGCCCTTCC +
Preference number: 4 (lower is better)
Translates to: DTLKKRGDLSYSKACFVGRTQSK*RKSRPS
Trigger: GGAAGGGCGTGATTTCCTGCATTTGCTCTGCGTCCT...ACCAACGAAACAGGCTTTACTATAACTCAGATCACCGCGCTTTTTGAGTGTGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000508775.6
CDS-3UTR GCA 90 bp GACACACTCAAAAAGCGCGGTGATCTGAGTTATAGTAAAGCCTGTTTCGTTGGTGCCCACATCTCAGGGTaGAGTCCAAGACATATGGTC +
Preference number: 4 (lower is better)
Translates to: DTLKKRGDLSYSKACFVGAHISG*SPRHMV
Trigger: GACCATATGTCTTGGACTGCACCCTGAGATGTGGGC...ACCAACGAAACAGGCTTTACTATAACTCAGATCACCGCGCTTTTTGAGTGTGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000508775.6
CDS-3UTR CCA 90 bp GACACACTCAAAAAGCGCGGTGATCTGAGTTATAGTAAAGCCTGTTTCGTTGGTCTGCTGAGAAGGGGCTaGTCTGAAGGAGTTTCATGG +
Preference number: 4 (lower is better)
Translates to: DTLKKRGDLSYSKACFVGLLRRG*SEGVSW
Trigger: CCATGAAACTCCTTCAGACCAGCCCCTTCTCAGCAG...ACCAACGAAACAGGCTTTACTATAACTCAGATCACCGCGCTTTTTGAGTGTGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000508775.6
CDS-3UTR CCA 90 bp TGTGATTGTATCCTGGTAATTTCATTTCAGGAGCTAGAGCTTGTGAGGAAAAGTCCTGAGCCGCCATACTaGGGAGGTGTGATCTGGGAG +
Preference number: 4 (lower is better)
Translates to: CDCILVISFQELELVRKSPEPPY*GGVIWE
Trigger: CTCCCAGATCACACCTCCCCAGTATGGCGGCTCAGG...ACTTTTCCTCACAAGCTCTAGCTCCTGAAATGAAATTACCAGGATACAATCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508775.6
CDS-3UTR TCA 90 bp GACACACTCAAAAAGCGCGGTGATCTGAGTTATAGTAAAGCCTGTTTCGTTGGTTTAGAAGCACACTGTTaGGGTCCAGCTCCCTGTAGA +
Preference number: 4 (lower is better)
Translates to: DTLKKRGDLSYSKACFVGLEAHC*GPAPCR
Trigger: TCTACAGGGAGCTGGACCTCAACAGTGTGCTTCTAA...ACCAACGAAACAGGCTTTACTATAACTCAGATCACCGCGCTTTTTGAGTGTGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000508775.6
CDS-3UTR GCA 90 bp TGTCCAAAGCCGCACAACACAGGAGTAAACCCTAATGTTAATGCTAAACTTTATGCGGCGCAGGTCCCATaGTTTTCCCACTCATGCTTC +
Preference number: 4 (lower is better)
Translates to: CPKPHNTGVNPNVNAKLYAAQVP*FSHSCF
Trigger: GAAGCATGAGTGGGAAAAGCATGGGACCTGCGCCGC...ATAAAGTTTAGCATTAACATTAGGGTTTACTCCTGTGTTGTGCGGCTTTGGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421787.5
CDS-3UTR GCA 90 bp TGTGATTGTATCCTGGTAATTTCATTTCAGGAGCTAGAGCTTGTGAGGAAAAGTAGTCCATGTCTCCGCTaGCCAGGCCTCATCTATGCC +
Preference number: 4 (lower is better)
Translates to: CDCILVISFQELELVRKSSPCLR*PGLIYA
Trigger: GGCATAGATGAGGCCTGGGCAGCGGAGACATGGACT...ACTTTTCCTCACAAGCTCTAGCTCCTGAAATGAAATTACCAGGATACAATCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508775.6
CDS-3UTR GCA 90 bp GACACACTCAAAAAGCGCGGTGATCTGAGTTATAGTAAAGCCTGTTTCGTTGGTTCATCATCAGCAAGTTaGATCCCACTGACCATCCCC +
Preference number: 4 (lower is better)
Translates to: DTLKKRGDLSYSKACFVGSSSAS*IPLTIP
Trigger: GGGGATGGTCAGTGGGATGCAACTTGCTGATGATGA...ACCAACGAAACAGGCTTTACTATAACTCAGATCACCGCGCTTTTTGAGTGTGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000508775.6
CDS-3UTR CCA 90 bp TGCAGAAGAGGGCTCAGCTCCTCCATTACAGAAGAGACAAAATACAGGGACTGCTCCAATTCACAGGCATaGAGGGGAAACAGCAAAATA +
Preference number: 4 (lower is better)
Translates to: CRRGLSSSITEETKYRDCSNSQA*RGNSKI
Trigger: TATTTTGCTGTTTCCCCTCCATGCCTGTGAATTGGA...GCAGTCCCTGTATTTTGTCTCTTCTGTAATGGAGGAGCTGAGCCCTCTTCTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000508775.6
CDS-3UTR CCA 90 bp GACACACTCAAAAAGCGCGGTGATCTGAGTTATAGTAAAGCCTGTTTCGTTGGTGTAGGCACATTTCGCTaGGGGCTCCATGTACATTTC +
Preference number: 4 (lower is better)
Translates to: DTLKKRGDLSYSKACFVGVGTFR*GLHVHF
Trigger: GAAATGTACATGGAGCCCCCAGCGAAATGTGCCTAC...ACCAACGAAACAGGCTTTACTATAACTCAGATCACCGCGCTTTTTGAGTGTGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000508775.6
CDS-3UTR CCA 90 bp GACACACTCAAAAAGCGCGGTGATCTGAGTTATAGTAAAGCCTGTTTCGTTGGTATATGCCACCACTCTTaGAGTGGGCCCAAGAGGAAA +
Preference number: 4 (lower is better)
Translates to: DTLKKRGDLSYSKACFVGICHHS*SGPKRK
Trigger: TTTCCTCTTGGGCCCACTCCAAGAGTGGTGGCATAT...ACCAACGAAACAGGCTTTACTATAACTCAGATCACCGCGCTTTTTGAGTGTGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000508775.6
3UTR CAA 72 bp CCTACTTTCTCACCGTCCCATCTGCCTGGTAAACCTTaGTCTCTCTCTGAACATTCTGCATTTCAGACTGTC +
Preference number: 4 (lower is better)
Translates to: PTFSPSHLPGKP*SLSEHSAFQTV
Trigger: GACAGTCTGAAATGCAGAATGTTCAGAGAGAGACAAAGGTTTACCAGGCAGATGGGACGGTGAGAAAGTAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508775.6
CDS-3UTR CCA 90 bp GACACACTCAAAAAGCGCGGTGATCTGAGTTATAGTAAAGCCTGTTTCGTTGGTCCTGTGCCATCCAGCTaGCATCTTCTATGTAACACA +
Preference number: 4 (lower is better)
Translates to: DTLKKRGDLSYSKACFVGPVPSS*HLLCNT
Trigger: TGTGTTACATAGAAGATGCCAGCTGGATGGCACAGG...ACCAACGAAACAGGCTTTACTATAACTCAGATCACCGCGCTTTTTGAGTGTGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000508775.6
CDS-3UTR TCA 90 bp GACACACTCAAAAAGCGCGGTGATCTGAGTTATAGTAAAGCCTGTTTCGTTGGTCTTCTTCCATTTAGCTaGCGTGACAATGGCAGGAAA +
Preference number: 4 (lower is better)
Translates to: DTLKKRGDLSYSKACFVGLLPFS*RDNGRK
Trigger: TTTCCTGCCATTGTCACGTCAGCTAAATGGAAGAAG...ACCAACGAAACAGGCTTTACTATAACTCAGATCACCGCGCTTTTTGAGTGTGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000508775.6
CDS-3UTR TCA 90 bp TGTGATTGTATCCTGGTAATTTCATTTCAGGAGCTAGAGCTTGTGAGGAAAAGTCTTGTGCTCATGTTTTaGACCATCCAGCCCCTCACC +
Preference number: 4 (lower is better)
Translates to: CDCILVISFQELELVRKSLVLMF*TIQPLT
Trigger: GGTGAGGGGCTGGATGGTTCAAAACATGAGCACAAG...ACTTTTCCTCACAAGCTCTAGCTCCTGAAATGAAATTACCAGGATACAATCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000508775.6
CDS-3UTR TCA 90 bp GACACACTCAAAAAGCGCGGTGATCTGAGTTATAGTAAAGCCTGTTTCGTTGGTTGGGAGACTGAGGCTTaGACTAAGTCAGTAATGAGA +
Preference number: 4 (lower is better)
Translates to: DTLKKRGDLSYSKACFVGWETEA*TKSVMR
Trigger: TCTCATTACTGACTTAGTTCAAGCCTCAGTCTCCCA...ACCAACGAAACAGGCTTTACTATAACTCAGATCACCGCGCTTTTTGAGTGTGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000508775.6
CDS-3UTR GCA 90 bp TCGAGTCATGAAAAGACACTGGAGGAACTGCAAACATACATTGCTAAGTGCAAGTACGTCAGGCCAGTATaGCCTCATTTCTGGCAAAAG +
Preference number: 4 (lower is better)
Translates to: SSHEKTLEELQTYIAKCKYVRPV*PHFWQK
Trigger: CTTTTGCCAGAAATGAGGGCATACTGGCCTGACGTA...CTTGCACTTAGCAATGTATGTTTGCAGTTCCTCCAGTGTCTTTTCATGACTCGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421787.5
CDS-3UTR GCA 90 bp TGTCCAAAGCCGCACAACACAGGAGTAAACCCTAATGTTAATGCTAAACTTTATTGGGACTTGCTCTCCTaGATTTGTCCAAAGCCGCAC +
Preference number: 4 (lower is better)
Translates to: CPKPHNTGVNPNVNAKLYWDLLS*ICPKPH
Trigger: GTGCGGCTTTGGACAAATGCAGGAGAGCAAGTCCCA...ATAAAGTTTAGCATTAACATTAGGGTTTACTCCTGTGTTGTGCGGCTTTGGACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421787.5
CDS-3UTR GCA 90 bp TGTGATTGTATCCTGGTAATTTCATTTCAGGAGCTAGAGCTTGTGAGGAAAAGTGGCTTAGAGCTGATGTaGCTCAGACACAGGTGCACT +
Preference number: 4 (lower is better)
Translates to: CDCILVISFQELELVRKSGLELM*LRHRCT
Trigger: AGTGCACCTGTGTCTGAGGCACATCAGCTCTAAGCC...ACTTTTCCTCACAAGCTCTAGCTCCTGAAATGAAATTACCAGGATACAATCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508775.6
CDS-3UTR GCA 90 bp GACACACTCAAAAAGCGCGGTGATCTGAGTTATAGTAAAGCCTGTTTCGTTGGTTTTGAAACGGAGTCTTaGTCTGTCATCCAGACTGGA +
Preference number: 4 (lower is better)
Translates to: DTLKKRGDLSYSKACFVGFETES*SVIQTG
Trigger: TCCAGTCTGGATGACAGAGCAAGACTCCGTTTCAAA...ACCAACGAAACAGGCTTTACTATAACTCAGATCACCGCGCTTTTTGAGTGTGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000508775.6
CDS-3UTR CCA 90 bp TGTGATTGTATCCTGGTAATTTCATTTCAGGAGCTAGAGCTTGTGAGGAAAAGTGCAGAGAGCCATGGTTaGTTACGGAGAGTGGCACAA +
Preference number: 4 (lower is better)
Translates to: CDCILVISFQELELVRKSAESHG*LRRVAQ
Trigger: TTGTGCCACTCTCCGTAACCAACCATGGCTCTCTGC...ACTTTTCCTCACAAGCTCTAGCTCCTGAAATGAAATTACCAGGATACAATCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508775.6
CDS-3UTR GCA 90 bp TGTGATTGTATCCTGGTAATTTCATTTCAGGAGCTAGAGCTTGTGAGGAAAAGTCAAATGCACCAGCTATaGTCCTCTTTTCCCTTGCCG +
Preference number: 4 (lower is better)
Translates to: CDCILVISFQELELVRKSQMHQL*SSFPLP
Trigger: CGGCAAGGGAAAAGAGGAGCATAGCTGGTGCATTTG...ACTTTTCCTCACAAGCTCTAGCTCCTGAAATGAAATTACCAGGATACAATCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508775.6
CDS-3UTR GCA 90 bp TGCAGAAGAGGGCTCAGCTCCTCCATTACAGAAGAGACAAAATACAGGGACTGCTCATCCCATAAGCAATaGAATGGACTTCTTTTCTAT +
Preference number: 4 (lower is better)
Translates to: CRRGLSSSITEETKYRDCSSHKQ*NGLLFY
Trigger: ATAGAAAAGAAGTCCATTGCATTGCTTATGGGATGA...GCAGTCCCTGTATTTTGTCTCTTCTGTAATGGAGGAGCTGAGCCCTCTTCTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508775.6
CDS-3UTR CCA 90 bp TGTCCAAAGCCGCACAACACAGGAGTAAACCCTAATGTTAATGCTAAACTTTATCCAAAGTACTTCTTCTaGGAGTTGAGCGCATCCACC +
Preference number: 4 (lower is better)
Translates to: CPKPHNTGVNPNVNAKLYPKYFF*ELSAST
Trigger: GGTGGATGCGCTCAACTCCCAGAAGAAGTACTTTGG...ATAAAGTTTAGCATTAACATTAGGGTTTACTCCTGTGTTGTGCGGCTTTGGACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421787.5
CDS-3UTR TCA 90 bp TGTGATTGTATCCTGGTAATTTCATTTCAGGAGCTAGAGCTTGTGAGGAAAAGTGAGATGGCTGCTCTGTaGATACACCCAAATCTCCTA +
Preference number: 4 (lower is better)
Translates to: CDCILVISFQELELVRKSEMAAL*IHPNLL
Trigger: TAGGAGATTTGGGTGTATTCACAGAGCAGCCATCTC...ACTTTTCCTCACAAGCTCTAGCTCCTGAAATGAAATTACCAGGATACAATCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508775.6
CDS-3UTR TCA 90 bp GACACACTCAAAAAGCGCGGTGATCTGAGTTATAGTAAAGCCTGTTTCGTTGGTTGCCTTATACTTACATaGTCTGAGGCAGGTTATCAA +
Preference number: 4 (lower is better)
Translates to: DTLKKRGDLSYSKACFVGCLILT*SEAGYQ
Trigger: TTGATAACCTGCCTCAGATCATGTAAGTATAAGGCA...ACCAACGAAACAGGCTTTACTATAACTCAGATCACCGCGCTTTTTGAGTGTGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000508775.6
CDS-3UTR TCA 90 bp GACACACTCAAAAAGCGCGGTGATCTGAGTTATAGTAAAGCCTGTTTCGTTGGTATCTTGGTGACTGGCTaGATCTTGTACATGACTTTT +
Preference number: 4 (lower is better)
Translates to: DTLKKRGDLSYSKACFVGILVTG*ILYMTF
Trigger: AAAAGTCATGTACAAGATTCAGCCAGTCACCAAGAT...ACCAACGAAACAGGCTTTACTATAACTCAGATCACCGCGCTTTTTGAGTGTGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000508775.6
CDS-3UTR GCA 90 bp TGTGATTGTATCCTGGTAATTTCATTTCAGGAGCTAGAGCTTGTGAGGAAAAGTGACAGAAACAAATCCTaGCCTGCCAAGCCAACAGAA +
Preference number: 4 (lower is better)
Translates to: CDCILVISFQELELVRKSDRNKS*PAKPTE
Trigger: TTCTGTTGGCTTGGCAGGGCAGGATTTGTTTCTGTC...ACTTTTCCTCACAAGCTCTAGCTCCTGAAATGAAATTACCAGGATACAATCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508775.6
CDS-3UTR TCA 90 bp TGTGATTGTATCCTGGTAATTTCATTTCAGGAGCTAGAGCTTGTGAGGAAAAGTTTATGGATTACTCACTaGCACACTCAAAAAGCGCGG +
Preference number: 4 (lower is better)
Translates to: CDCILVISFQELELVRKSLWITH*HTQKAR
Trigger: CCGCGCTTTTTGAGTGTGTCAGTGAGTAATCCATAA...ACTTTTCCTCACAAGCTCTAGCTCCTGAAATGAAATTACCAGGATACAATCACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000508775.6
CDS-3UTR GCA 90 bp TGTGATTGTATCCTGGTAATTTCATTTCAGGAGCTAGAGCTTGTGAGGAAAAGTTCACGCCCTTCCAGGTaGAAAACAAATCAGATCTTG +
Preference number: 4 (lower is better)
Translates to: CDCILVISFQELELVRKSSRPSR*KTNQIL
Trigger: CAAGATCTGATTTGTTTTGCACCTGGAAGGGCGTGA...ACTTTTCCTCACAAGCTCTAGCTCCTGAAATGAAATTACCAGGATACAATCACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508775.6
CDS-3UTR GCA 90 bp GACACACTCAAAAAGCGCGGTGATCTGAGTTATAGTAAAGCCTGTTTCGTTGGTCCATCCGCTCTCAAATaGTCACACTCATATAATAAA +
Preference number: 4 (lower is better)
Translates to: DTLKKRGDLSYSKACFVGPSALK*SHSYNK
Trigger: TTTATTATATGAGTGTGAGCATTTGAGAGCGGATGG...ACCAACGAAACAGGCTTTACTATAACTCAGATCACCGCGCTTTTTGAGTGTGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000508775.6
CDS-3UTR GCA 90 bp GACACACTCAAAAAGCGCGGTGATCTGAGTTATAGTAAAGCCTGTTTCGTTGGTTGTTTCGTTGGTGTTTaGCTGATAATATCTTACACC +
Preference number: 4 (lower is better)
Translates to: DTLKKRGDLSYSKACFVGCFVGV*LIISYT
Trigger: GGTGTAAGATATTATCAGGCAAACACCAACGAAACA...ACCAACGAAACAGGCTTTACTATAACTCAGATCACCGCGCTTTTTGAGTGTGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000508775.6
CDS-3UTR TCA 90 bp TGTCCAAAGCCGCACAACACAGGAGTAAACCCTAATGTTAATGCTAAACTTTATAGGCTACATACTGTATaGTTCCAACGACGTGACAAT +
Preference number: 4 (lower is better)
Translates to: CPKPHNTGVNPNVNAKLYRLHTV*FQRRDN
Trigger: ATTGTCACGTCGTTGGAATCATACAGTATGTAGCCT...ATAAAGTTTAGCATTAACATTAGGGTTTACTCCTGTGTTGTGCGGCTTTGGACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421787.5
CDS-3UTR TCA 90 bp TCGAGTCATGAAAAGACACTGGAGGAACTGCAAACATACATTGCTAAGTGCAAGCTGACACCAAAGAATTaGGCTCTGCTAATTAACAAT +
Preference number: 4 (lower is better)
Translates to: SSHEKTLEELQTYIAKCKLTPKN*ALLINN
Trigger: ATTGTTAATTAGCAGAGCTCAATTCTTTGGTGTCAG...CTTGCACTTAGCAATGTATGTTTGCAGTTCCTCCAGTGTCTTTTCATGACTCGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421787.5
CDS-3UTR TCA 90 bp TGTGATTGTATCCTGGTAATTTCATTTCAGGAGCTAGAGCTTGTGAGGAAAAGTGTGACATTTCAGTTTTaGTTAGTGAGGTACCAAGCC +
Preference number: 4 (lower is better)
Translates to: CDCILVISFQELELVRKSVTFQF*LVRYQA
Trigger: GGCTTGGTACCTCACTAATCAAAACTGAAATGTCAC...ACTTTTCCTCACAAGCTCTAGCTCCTGAAATGAAATTACCAGGATACAATCACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508775.6
CDS-3UTR GCA 90 bp GACACACTCAAAAAGCGCGGTGATCTGAGTTATAGTAAAGCCTGTTTCGTTGGTGTTGAATCTGGAAAATaGACGACCTACTTGTTTAAT +
Preference number: 4 (lower is better)
Translates to: DTLKKRGDLSYSKACFVGVESGK*TTYLFN
Trigger: ATTAAACAAGTAGGTCGTGCATTTTCCAGATTCAAC...ACCAACGAAACAGGCTTTACTATAACTCAGATCACCGCGCTTTTTGAGTGTGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000508775.6
CDS-3UTR TCA 90 bp TGTGATTGTATCCTGGTAATTTCATTTCAGGAGCTAGAGCTTGTGAGGAAAAGTTATACTTACATGATCTaGGGCAGGTTATCAAACGCT +
Preference number: 4 (lower is better)
Translates to: CDCILVISFQELELVRKSYTYMI*GRLSNA
Trigger: AGCGTTTGATAACCTGCCTCAGATCATGTAAGTATA...ACTTTTCCTCACAAGCTCTAGCTCCTGAAATGAAATTACCAGGATACAATCACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508775.6
CDS-3UTR GCA 90 bp TGTGATTGTATCCTGGTAATTTCATTTCAGGAGCTAGAGCTTGTGAGGAAAAGTATTACAATTCTCAGCTaGCTTAGGACCTGCATTAAA +
Preference number: 4 (lower is better)
Translates to: CDCILVISFQELELVRKSITILS*LRTCIK
Trigger: TTTAATGCAGGTCCTAAGGCAGCTGAGAATTGTAAT...ACTTTTCCTCACAAGCTCTAGCTCCTGAAATGAAATTACCAGGATACAATCACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508775.6
CDS CCA 90 bp CGCTCCCTCCGCTGCAGCAGCGGCCACCGGGTGCGCCCGGAGCCCTaGGACGGCCTAAACCAGTATCTCGCGGGCCCCGCGCCGGGCTCC +
Preference number: 5 (lower is better)
Translates to: RSLRCSSGHRVRPEP*DGLNQYLAGPAPGS
Trigger: GGAGCCCGGCGCGGGGCCCGCGAGATACTGGTTTAGGCCGTCCCAGGGCTCCGGGCGCACCCGGTGGCCGCTGCTGCAGCGGAGGGAGCG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000028008.9
ENST00000366855.10
ENST00000421787.5
ENST00000508775.6
ENST00000611959.2
ENST00000620173.5
ENST00000683333.1
ENST00000683770.1
CDS GCA 90 bp GCAGCCCTGGCGACCCGGGCCCCTCGGAGCTCCCCTTCAGGATCGTaGACCAAGCGCGCACGTCCCGGGCTCTGCTTCGCGACCCACAGC +
Preference number: 5 (lower is better)
Translates to: AALATRAPRSSPSGS*TKRARPGLCFATHS
Trigger: GCTGTGGGTCGCGAAGCAGAGCCCGGGACGTGCGCGCTTGGTGCACGATCCTGAAGGGGAGCTCCGAGGGGCCCGGGTCGCCAGGGCTGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000028008.9
ENST00000366855.10
ENST00000421787.5
ENST00000508775.6
ENST00000611959.2
ENST00000683333.1
CDS CCA 90 bp CCCTGGATCCAGCTGTCAGGCTTGGGCGACAGCAGAGATCCCCACTaGGAAGTGCAGCCGGGGGAAGGGCGCACCCACCTGTTGAGGTCC +
Preference number: 5 (lower is better)
Translates to: PWIQLSGLGDSRDPH*EVQPGEGRTHLLRS
Trigger: GGACCTCAACAGGTGGGTGCGCCCTTCCCCCGGCTGCACTTCCCAGTGGGGATCTCTGCTGTCGCCCAAGCCTGACAGCTGGATCCAGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000358165.7
CDS TCA 90 bp CAAGCAAACACCCCGGCCTACTCAGAGCTCAGCGCTGCTGGAGGATaGGGTCCTCATGTCTATGGCTCCCACCCGGCCCCTTCCCAACCC +
Preference number: 5 (lower is better)
Translates to: QANTPAYSELSAAGG*GPHVYGSHPAPSQP
Trigger: GGGTTGGGAAGGGGCCGGGTGGGAGCCATAGACATGAGGACCTCATCCTCCAGCAGCGCTGAGCTCTGAGTAGGCCGGGGTGTTTGCTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510083.1
CDS GCA 90 bp GGGACAGCAACAAGCAAACACCCCGGCCTACTCAGAGCTCAGCGCTaGTGGAGGATGAGGTCCTCATGTCTATGGCTCCCACCCGGCCCC +
Preference number: 5 (lower is better)
Translates to: GTATSKHPGLLRAQR*WRMRSSCLWLPPGP
Trigger: GGGGCCGGGTGGGAGCCATAGACATGAGGACCTCATCCTCCAGCAGCGCTGAGCTCTGAGTAGGCCGGGGTGTTTGCTTGTTGCTGTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510083.1
CDS CCA 90 bp CAGGTACCCTTTCCAGTTCCTGACTCCTTCGGAGCATGGGAGCGCTaGGGCCACCACCGAGTGGAGCTGGCACACACATCACCACCCGTT +
Preference number: 5 (lower is better)
Translates to: QVPFPVPDSFGAWER*GHHRVELAHTSPPV
Trigger: AACGGGTGGTGATGTGTGTGCCAGCTCCACTCGGTGGTGGCCCCAGCGCTCCCATGCTCCGAAGGAGTCAGGAACTGGAAAGGGTACCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358165.7
CDS CCA 90 bp TGCTCCAGGCAGGTACCCTTTCCAGTTCCTGACTCCTTCGGAGCATaGGAGCGCTGGGGCCACCACCGAGTGGAGCTGGCACACACATCA +
Preference number: 5 (lower is better)
Translates to: CSRQVPFPVPDSFGA*ERWGHHRVELAHTS
Trigger: TGATGTGTGTGCCAGCTCCACTCGGTGGTGGCCCCAGCGCTCCCATGCTCCGAAGGAGTCAGGAACTGGAAAGGGTACCTGCCTGGAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358165.7
CDS GCA 90 bp ACCTCTGAGAGAACTTCGAGTGCAGGAACAGTGCTCCACCAAGCCTaGCACCTGCTTTGTCGCGTCCTAGGCTGGGAGCAGTCGCAGGCG +
Preference number: 5 (lower is better)
Translates to: TSERTSSAGTVLHQA*HLLCRVLGWEQSQA
Trigger: CGCCTGCGACTGCTCCCAGCCTAGGACGCGACAAAGCAGGTGGCAGGCTTGGTGGAGCACTGTTCCTGCACTCGAAGTTCTCTCAGAGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366855.10
ENST00000683158.1
ENST00000683333.1
ENST00000684236.1
CDS GCA 90 bp GACACCAGCAAATGTCACTCCTATGGAGGCCTGAGGCAGGACCTCTaGCTCTCCCATCCCCCTGTCCCAAACGGCCAAGTCCAAGCTCCC +
Preference number: 5 (lower is better)
Translates to: DTSKCHSYGGLRQDL*LSHPPVPNGQVQAP
Trigger: GGGAGCTTGGACTTGGCCGTTTGGGACAGGGGGATGGGAGAGGCAGAGGTCCTGCCTCAGGCCTCCATAGGAGTGACATTTGCTGGTGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000510083.1
CDS GCA 90 bp GGGCCTCCTCCTCGCTCTACTGAGGGAGTCCTCCCCCACTGCTTCTaGCTCGTGCCTTCTGACTCAAACCTCCTAGGAGGACACCTGCAT +
Preference number: 5 (lower is better)
Translates to: GPPPRSTEGVLPHCF*LVPSDSNLLGGHLH
Trigger: ATGCAGGTGTCCTCCTAGGAGGTTTGAGTCAGAAGGCACGAGGCAGAAGCAGTGGGGGAGGACTCCCTCAGTAGAGCGAGGAGGAGGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000510083.1
CDS CCA 90 bp TTCCTGACTCCTTCGGAGCATGGGAGCGCTGGGGCCACCACCGAGTaGAGCTGGCACACACATCACCACCCGTTTGCCACACCTGCTTTA +
Preference number: 5 (lower is better)
Translates to: FLTPSEHGSAGATTE*SWHTHHHPFATPAL
Trigger: TAAAGCAGGTGTGGCAAACGGGTGGTGATGTGTGTGCCAGCTCCACTCGGTGGTGGCCCCAGCGCTCCCATGCTCCGAAGGAGTCAGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358165.7
CDS CCA 90 bp ACAGCAACAAGCAAACACCCCGGCCTACTCAGAGCTCAGCGCTGCTaGAGGATGAGGTCCTCATGTCTATGGCTCCCACCCGGCCCCTTC +
Preference number: 5 (lower is better)
Translates to: TATSKHPGLLRAQRC*RMRSSCLWLPPGPF
Trigger: GAAGGGGCCGGGTGGGAGCCATAGACATGAGGACCTCATCCTCCAGCAGCGCTGAGCTCTGAGTAGGCCGGGGTGTTTGCTTGTTGCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510083.1
CDS CCA 90 bp ATGATGCCCCCACCTCCACCAGCGAAGCAGAGGATGCTGTCAACCTaGGCTTCATCCCCAGACCACAAGCCGCTCGCTGCGGCTCTGTTT +
Preference number: 5 (lower is better)
Translates to: MMPPPPPAKQRMLST*ASSPDHKPLAAALF
Trigger: AAACAGAGCCGCAGCGAGCGGCTTGTGGTCTGGGGATGAAGCCCAGGTTGACAGCATCCTCTGCTTCGCTGGTGGAGGTGGGGGCATCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000510083.1
CDS TCA 90 bp CTTGCCAAGCTTCTGACACCAGCAAATGTCACTCCTATGGAGGCCTaGGGCAGGACCTCTGCCTCTCCCATCCCCCTGTCCCAAACGGCC +
Preference number: 5 (lower is better)
Translates to: LAKLLTPANVTPMEA*GRTSASPIPLSQTA
Trigger: GGCCGTTTGGGACAGGGGGATGGGAGAGGCAGAGGTCCTGCCTCAGGCCTCCATAGGAGTGACATTTGCTGGTGTCAGAAGCTTGGCAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000510083.1
CDS GCA 90 bp CATCCCCAGACCACAAGCCGCTCGCTGCGGCTCTGTTTTCCTCTCTaGTCCTGTTTCTCTGGAGAGCAGAGCTCTCCTCCTCCCAGTGTC +
Preference number: 5 (lower is better)
Translates to: HPQTTSRSLRLCFPL*SCFSGEQSSPPPSV
Trigger: GACACTGGGAGGAGGAGAGCTCTGCTCTCCAGAGAAACAGGAGCAGAGAGGAAAACAGAGCCGCAGCGAGCGGCTTGTGGTCTGGGGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510083.1
CDS CCA 90 bp CTCCTAGGAGGACACCTGCATCCTCTCAGCCTCGTACTCTGGCTTTaGGGGGCACCAAGCTGGGGTCACCAGCTCCAGCAGATGCCTTTT +
Preference number: 5 (lower is better)
Translates to: LLGGHLHPLSLVLWL*GAPSWGHQLQQMPF
Trigger: AAAAGGCATCTGCTGGAGCTGGTGACCCCAGCTTGGTGCCCCCCAAAGCCAGAGTACGAGGCTGAGAGGATGCAGGTGTCCTCCTAGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000510083.1
CDS-3UTR CAA 90 bp GCTCTCCATCCTGAGATGCGCCTGCTCCTTTGTCCCCCTGGGAGACACTTGTACCACCAGGATGCTACCTaGTTGGCGTCCCCATCCGCT +
Preference number: 5 (lower is better)
Translates to: ALHPEMRLLLCPPGRHLYHQDAT*LASPSA
Trigger: AGCGGATGGGGACGCCAACAAGGTAGCATCCTGGTG...GTACAAGTGTCTCCCAGGGGGACAAAGGAGCAGGCGCATCTCAGGATGGAGAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000508775.6
CDS GCA 90 bp AATCATTCATTCAGCACTGAGTGCTGTGGGAGGAGGAACACTGCCTaGCCTGCTGCTGCACACACTCCCGTGAGGAAGGCGGTACACCCC +
Preference number: 5 (lower is better)
Translates to: NHSFSTECCGRRNTA*PAAAHTPVRKAVHP
Trigger: GGGGTGTACCGCCTTCCTCACGGGAGTGTGTGCAGCAGCAGGGCAGGCAGTGTTCCTCCTCCCACAGCACTCAGTGCTGAATGAATGATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000499370.6
ENST00000683968.1
CDS-3UTR CAA 90 bp CGGCTGCTCCAGAGCACACTGGGTGGGACTTGCTCTCCTGCATTTGTCCAAAGCGAGATTCGCGGTTGCTaGGGGGTTCAAGGGGAGGAA +
Preference number: 5 (lower is better)
Translates to: RLLQSTLGGTCSPAFVQSEIRGC*GVQGEE
Trigger: TTCCTCCCCTTGAACCCCCAAGCAACCGCGAATCTC...GCTTTGGACAAATGCAGGAGAGCAAGTCCCACCCAGTGTGCTCTGGAGCAGCCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000421787.5
CDS-3UTR CAA 90 bp CTCCAACAACGGAGCAGCTGGCTAAGGAACGATGTCCTGGGGCTCTGGTCACATTTCCCTTGCCGTCTGTaGCCCTGCACTTTGGGAGGC +
Preference number: 5 (lower is better)
Translates to: LQQRSSWLRNDVLGLWSHFPCRL*PCTLGG
Trigger: GCCTCCCAAAGTGCAGGGCAACAGACGGCAAGGGAA...ATGTGACCAGAGCCCCAGGACATCGTTCCTTAGCCAGCTGCTCCGTTGTTGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508775.6
CDS TCA 90 bp CTCTGCCTTTCGCGGCCCATAAAGCTTTCTCAGCCCTGTCCACTCTaGAGTATCTCTCTCTCCCGACCCCCTCCCCACGGTGGACACATT +
Preference number: 5 (lower is better)
Translates to: LCLSRPIKLSQPCPL*SISLSRPPPHGGHI
Trigger: AATGTGTCCACCGTGGGGAGGGGGTCGGGAGAGAGAGATACTTCAGAGTGGACAGGGCTGAGAAAGCTTTATGGGCCGCGAAAGGCAGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000510083.1
CDS GCA 90 bp GATGCTGTCAACCTGGGCTTCATCCCCAGACCACAAGCCGCTCGCTaGGGCTCTGTTTTCCTCTCTGCTCCTGTTTCTCTGGAGAGCAGA +
Preference number: 5 (lower is better)
Translates to: DAVNLGFIPRPQAAR*GSVFLSAPVSLESR
Trigger: TCTGCTCTCCAGAGAAACAGGAGCAGAGAGGAAAACAGAGCCGCAGCGAGCGGCTTGTGGTCTGGGGATGAAGCCCAGGTTGACAGCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510083.1
CDS CCA 90 bp ATCCACCGTGCTGTTTCTGATGCCCAAACAAGCGCCGTTCGCACCTaGAAGCAGCTCAGCAAATGTGTGGCCCCTGTGGCTTTTGCCACC +
Preference number: 5 (lower is better)
Translates to: IHRAVSDAQTSAVRT*KQLSKCVAPVAFAT
Trigger: GGTGGCAAAAGCCACAGGGGCCACACATTTGCTGAGCTGCTTCCAGGTGCGAACGGCGCTTGTTTGGGCATCAGAAACAGCACGGTGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510083.1
CDS-3UTR CAA 90 bp TGCCACATTGTCCGCATCTACACTGTACGGCCCTCCCCTGTGCCATCCAGCTGGTTGCAGCTGCTGGTCTaGCTTAGTGAGGCACAGTTC +
Preference number: 5 (lower is better)
Translates to: CHIVRIYTVRPSPVPSSWLQLLV*LSEAQF
Trigger: GAACTGTGCCTCACTAAGCAAGACCAGCAGCTGCAA...CCAGCTGGATGGCACAGGGGAGGGCCGTACAGTGTAGATGCGGACAATGTGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508775.6
CDS-3UTR CAA 90 bp TGCCACATTGTCCGCATCTACACTGTACGGCCCTCCCCTGTGCCATCCAGCTGGGATCCTTCCCTGCAGTaGCTGTCTCCCTTTCTTCAG +
Preference number: 5 (lower is better)
Translates to: CHIVRIYTVRPSPVPSSWDPSLQ*LSPFLQ
Trigger: CTGAAGAAAGGGAGACAGCAACTGCAGGGAAGGATC...CCAGCTGGATGGCACAGGGGAGGGCCGTACAGTGTAGATGCGGACAATGTGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508775.6
CDS-3UTR CAA 90 bp GCTCTCCATCCTGAGATGCGCCTGCTCCTTTGTCCCCCTGGGAGACACTTGTACCTCTGTTGCCCAAGCTaGAGTACAGTCTCGGCTCAC +
Preference number: 5 (lower is better)
Translates to: ALHPEMRLLLCPPGRHLYLCCPS*STVSAH
Trigger: GTGAGCCGAGACTGTACTCAAGCTTGGGCAACAGAG...GTACAAGTGTCTCCCAGGGGGACAAAGGAGCAGGCGCATCTCAGGATGGAGAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000508775.6
CDS TCA 90 bp AGGAAATGTCTGGGTCGGCAGCTCTCCTGGGTGCTCCCGCAGCCCTaGTTTCCCCATAAAACAGATGAGTGGATACGTGGCTGGATGCTG +
Preference number: 5 (lower is better)
Translates to: RKCLGRQLSWVLPQP*FPHKTDEWIRGWML
Trigger: CAGCATCCAGCCACGTATCCACTCATCTGTTTTATGGGGAAATCAGGGCTGCGGGAGCACCCAGGAGAGCTGCCGACCCAGACATTTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510083.1
CDS-3UTR CAA 90 bp GCTCTCCATCCTGAGATGCGCCTGCTCCTTTGTCCCCCTGGGAGACACTTGTACTTTTTCCACTCATGGTaGTCACGCAGGCGCTTGTCC +
Preference number: 5 (lower is better)
Translates to: ALHPEMRLLLCPPGRHLYFFHSW*SRRRLS
Trigger: GGACAAGCGCCTGCGTGACAACCATGAGTGGAAAAA...GTACAAGTGTCTCCCAGGGGGACAAAGGAGCAGGCGCATCTCAGGATGGAGAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000508775.6
CDS-3UTR CAA 90 bp CACCATAAGTTCCACTCATCCCTGTGGCCTAGTCCACGGGTCCTCTTTTCCATGGTCCAGGCATCACCCTaGCTGTCCAGCCGACACCTA +
Preference number: 5 (lower is better)
Translates to: HHKFHSSLWPSPRVLFSMVQASP*LSSRHL
Trigger: TAGGTGTCGGCTGGACAGCAAGGGTGATGCCTGGAC...CATGGAAAAGAGGACCCGTGGACTAGGCCACAGGGATGAGTGGAACTTATGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508775.6
CDS TCA 90 bp AAGCTAGGAGTGCAGCCAGGGAGGGCCTCACTGAAGGGAAGCCACTaGGCCACGAAGCACCTTTCTCCTAAGGATGCTCAAGAGAAATGC +
Preference number: 5 (lower is better)
Translates to: KLGVQPGRASLKGSH*ATKHLSPKDAQEKC
Trigger: GCATTTCTCTTGAGCATCCTTAGGAGAAAGGTGCTTCGTGGCTCAGTGGCTTCCCTTCAGTGAGGCCCTCCCTGGCTGCACTCCTAGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000499370.6
ENST00000683968.1
CDS TCA 90 bp CTCTGGGCAAACATGGCAGGCACATGTCCCTCATCTATTCGCACATaGGTCCAGGTGAGGACGGTGAGGGCCCTGCAAGCGATCATCTTA +
Preference number: 5 (lower is better)
Translates to: LWANMAGTCPSSIRT*VQVRTVRALQAIIL
Trigger: TAAGATGATCGCTTGCAGGGCCCTCACCGTCCTCACCTGGACTCATGTGCGAATAGATGAGGGACATGTGCCTGCCATGTTTGCCCAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510083.1
CDS TCA 90 bp ACTGTCCATGCAGGGTCTGATCATCCTCCCCTCTTGCCAAGCTTCTaGCACCAGCAAATGTCACTCCTATGGAGGCCTGAGGCAGGACCT +
Preference number: 5 (lower is better)
Translates to: TVHAGSDHPPLLPSF*HQQMSLLWRPEAGP
Trigger: AGGTCCTGCCTCAGGCCTCCATAGGAGTGACATTTGCTGGTGTCAGAAGCTTGGCAAGAGGGGAGGATGATCAGACCCTGCATGGACAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510083.1
CDS GCA 90 bp GCAACGCATTTCCCAGGAAATGTCTGGGTCGGCAGCTCTCCTGGGTaGTCCCGCAGCCCTGATTTCCCCATAAAACAGATGAGTGGATAC +
Preference number: 5 (lower is better)
Translates to: ATHFPGNVWVGSSPG*SRSPDFPIKQMSGY
Trigger: GTATCCACTCATCTGTTTTATGGGGAAATCAGGGCTGCGGGAGCACCCAGGAGAGCTGCCGACCCAGACATTTCCTGGGAAATGCGTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510083.1
CDS CCA 90 bp GCCACAGAGTTCGGCACATGCTGGTTGGAGTCCTCGTTTTCCCTATaGCCGACTCTGATGATGAGATGGTGCCCAGATGGGCATCCCAAT +
Preference number: 5 (lower is better)
Translates to: ATEFGTCWLESSFSL*PTLMMRWCPDGHPN
Trigger: ATTGGGATGCCCATCTGGGCACCATCTCATCATCAGAGTCGGCCATAGGGAAAACGAGGACTCCAACCAGCATGTGCCGAACTCTGTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358165.7
CDS-3UTR CAA 90 bp CACCATAAGTTCCACTCATCCCTGTGGCCTAGTCCACGGGTCCTCTTTTCCATGGGTGGTCTTGAACGCTaGACCTCAAGTGATCCGCCC +
Preference number: 5 (lower is better)
Translates to: HHKFHSSLWPSPRVLFSMGGLER*TSSDPP
Trigger: GGGCGGATCACTTGAGGTCAAGCGTTCAAGACCACC...CATGGAAAAGAGGACCCGTGGACTAGGCCACAGGGATGAGTGGAACTTATGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508775.6
CDS TCA 90 bp ACTCCTTTCAAAGGACAGGACTCCGAGTATCCACCGTGCTGTTTCTaGTGCCCAAACAAGCGCCGTTCGCACCTGGAAGCAGCTCAGCAA +
Preference number: 5 (lower is better)
Translates to: TPFKGQDSEYPPCCF*CPNKRRSHLEAAQQ
Trigger: TTGCTGAGCTGCTTCCAGGTGCGAACGGCGCTTGTTTGGGCATCAGAAACAGCACGGTGGATACTCGGAGTCCTGTCCTTTGAAAGGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510083.1
CDS TCA 90 bp GCCAGGGAGGAGAGTGTCTTCAGGGTCAACAGCTGGACCAGCATGTaGAACCTGCCTGATTCTATCCGCTGGACTGGACAGCATTGCAAA +
Preference number: 5 (lower is better)
Translates to: AREESVFRVNSWTSM*NLPDSIRWTGQHCK
Trigger: TTTGCAATGCTGTCCAGTCCAGCGGATAGAATCAGGCAGGTTTCACATGCTGGTCCAGCTGTTGACCCTGAAGACACTCTCCTCCCTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000682498.1
CDS GCA 90 bp TGGGGCCACCACCGAGTGGAGCTGGCACACACATCACCACCCGTTTaGCACACCTGCTTTAAAAGACAGCAATTGAAATCGGATTCCAGG +
Preference number: 5 (lower is better)
Translates to: WGHHRVELAHTSPPV*HTCFKRQQLKSDSR
Trigger: CCTGGAATCCGATTTCAATTGCTGTCTTTTAAAGCAGGTGTGGCAAACGGGTGGTGATGTGTGTGCCAGCTCCACTCGGTGGTGGCCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358165.7
CDS CCA 90 bp TGGTTGGAGTCCTCGTTTTCCCTATGGCCGACTCTGATGATGAGATaGTGCCCAGATGGGCATCCCAATACTCTGCACCCACTCTGTGTG +
Preference number: 5 (lower is better)
Translates to: WLESSFSLWPTLMMR*CPDGHPNTLHPLCV
Trigger: CACACAGAGTGGGTGCAGAGTATTGGGATGCCCATCTGGGCACCATCTCATCATCAGAGTCGGCCATAGGGAAAACGAGGACTCCAACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358165.7
CDS CCA 90 bp ATCTTTTCCACCCCATGGCTTCCCTCCCATCCAGACCTCTCTTCCTaGACTCTGCAGAGAGCTCCAATTCGAACTGTCCATGCAGGGTCT +
Preference number: 5 (lower is better)
Translates to: IFSTPWLPSHPDLSS*TLQRAPIRTVHAGS
Trigger: AGACCCTGCATGGACAGTTCGAATTGGAGCTCTCTGCAGAGTCCAGGAAGAGAGGTCTGGATGGGAGGGAAGCCATGGGGTGGAAAAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510083.1
CDS CCA 90 bp ACAAAGGACAAGCTCTCCTTTTCCCAGAGAAGAGCTTGTGTGAGCTaGGCAGCCTGGGCACCAGTCGCGCTAAATCCAACAGAACTGGAG +
Preference number: 5 (lower is better)
Translates to: TKDKLSFSQRRACVS*AAWAPVALNPTELE
Trigger: CTCCAGTTCTGTTGGATTTAGCGCGACTGGTGCCCAGGCTGCCCAGCTCACACAAGCTCTTCTCTGGGAAAAGGAGAGCTTGTCCTTTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000684086.1
CDS-3UTR CAA 90 bp CACCATAAGTTCCACTCATCCCTGTGGCCTAGTCCACGGGTCCTCTTTTCCATGCTCTTACTGCAGAGCTaGTTTCCAGAGGGCCAGAGG +
Preference number: 5 (lower is better)
Translates to: HHKFHSSLWPSPRVLFSMLLLQS*FPEGQR
Trigger: CCTCTGGCCCTCTGGAAACAAGCTCTGCAGTAAGAG...CATGGAAAAGAGGACCCGTGGACTAGGCCACAGGGATGAGTGGAACTTATGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508775.6
CDS-3UTR CAA 90 bp TCCCAAGCACAAAACAGCCACTCAGGCGTGGGAGAGCTCCTTTCTCCCCGTGTACCAAGAGAAATGCTCTaGGGTACAGCAATAGCCCTG +
Preference number: 5 (lower is better)
Translates to: SQAQNSHSGVGELLSPRVPREML*GTAIAL
Trigger: CAGGGCTATTGCTGTACCCAAGAGCATTTCTCTTGG...TACACGGGGAGAAAGGAGCTCTCCCACGCCTGAGTGGCTGTTTTGTGCTTGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508775.6
CDS-3UTR CAA 90 bp CTCCAACAACGGAGCAGCTGGCTAAGGAACGATGTCCTGGGGCTCTGGTCACATTCTCCCACTACTAGCTaGGAGAGAGGGATTGCTTTC +
Preference number: 5 (lower is better)
Translates to: LQQRSSWLRNDVLGLWSHSPTTS*ERGIAF
Trigger: GAAAGCAATCCCTCTCTCCAAGCTAGTAGTGGGAGA...ATGTGACCAGAGCCCCAGGACATCGTTCCTTAGCCAGCTGCTCCGTTGTTGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508775.6
CDS-3UTR CAA 90 bp CACCATAAGTTCCACTCATCCCTGTGGCCTAGTCCACGGGTCCTCTTTTCCATGAGCAGAGAGCCATGGTaGGTTACGGAGAGTGGCACA +
Preference number: 5 (lower is better)
Translates to: HHKFHSSLWPSPRVLFSMSREPW*VTESGT
Trigger: TGTGCCACTCTCCGTAACCAACCATGGCTCTCTGCT...CATGGAAAAGAGGACCCGTGGACTAGGCCACAGGGATGAGTGGAACTTATGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508775.6
CDS TCA 90 bp TGCTCTGCCGGACCCTGGAGCACACACTTCTCACAAAGGGAGCCATaGAATCTGTGCTTCCAAATCACTGGTCTAAGCAGCCTTCAGCTC +
Preference number: 5 (lower is better)
Translates to: CSAGPWSTHFSQREP*NLCFQITGLSSLQL
Trigger: GAGCTGAAGGCTGCTTAGACCAGTGATTTGGAAGCACAGATTTCATGGCTCCCTTTGTGAGAAGTGTGTGCTCCAGGGTCCGGCAGAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358165.7
ENST00000496851.6
ENST00000499370.6
CDS TCA 90 bp CTGGACTCTGCAGAGAGCTCCAATTCGAACTGTCCATGCAGGGTCTaGTCATCCTCCCCTCTTGCCAAGCTTCTGACACCAGCAAATGTC +
Preference number: 5 (lower is better)
Translates to: LDSAESSNSNCPCRV*SSSPLAKLLTPANV
Trigger: GACATTTGCTGGTGTCAGAAGCTTGGCAAGAGGGGAGGATGATCAGACCCTGCATGGACAGTTCGAATTGGAGCTCTCTGCAGAGTCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510083.1
CDS GCA 90 bp TTGGAGTCCTCGTTTTCCCTATGGCCGACTCTGATGATGAGATGGTaGCCAGATGGGCATCCCAATACTCTGCACCCACTCTGTGTGATC +
Preference number: 5 (lower is better)
Translates to: LESSFSLWPTLMMRW*PDGHPNTLHPLCVI
Trigger: GATCACACAGAGTGGGTGCAGAGTATTGGGATGCCCATCTGGGCACCATCTCATCATCAGAGTCGGCCATAGGGAAAACGAGGACTCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358165.7
CDS GCA 90 bp CTCCAATTCGAACTGTCCATGCAGGGTCTGATCATCCTCCCCTCTTaGCAAGCTTCTGACACCAGCAAATGTCACTCCTATGGAGGCCTG +
Preference number: 5 (lower is better)
Translates to: LQFELSMQGLIILPS*QASDTSKCHSYGGL
Trigger: CAGGCCTCCATAGGAGTGACATTTGCTGGTGTCAGAAGCTTGGCAAGAGGGGAGGATGATCAGACCCTGCATGGACAGTTCGAATTGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510083.1
CDS-3UTR CAA 90 bp TCCCAAGCACAAAACAGCCACTCAGGCGTGGGAGAGCTCCTTTCTCCCCGTGTAGGGAACCTGGTTTTCTaGTCTCGCTTTTACCTATGG +
Preference number: 5 (lower is better)
Translates to: SQAQNSHSGVGELLSPRVGNLVF*SRFYLW
Trigger: CCATAGGTAAAAGCGAGACAAGAAAACCAGGTTCCC...TACACGGGGAGAAAGGAGCTCTCCCACGCCTGAGTGGCTGTTTTGTGCTTGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000508775.6
CDS-3UTR CAA 90 bp CACCATAAGTTCCACTCATCCCTGTGGCCTAGTCCACGGGTCCTCTTTTCCATGCTCATCATCAGCAAGTaGCATCCCACTGACCATCCC +
Preference number: 5 (lower is better)
Translates to: HHKFHSSLWPSPRVLFSMLIISK*HPTDHP
Trigger: GGGATGGTCAGTGGGATGCAACTTGCTGATGATGAG...CATGGAAAAGAGGACCCGTGGACTAGGCCACAGGGATGAGTGGAACTTATGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508775.6
CDS TCA 90 bp GTGAAAGCTGAAATTAAGTGTCCCCTCCACGACTTCTTCGACCTCTaGGAGAACTTCGAGTGCAGGAACAGTGCTCCACCAAGCCTGCCA +
Preference number: 5 (lower is better)
Translates to: VKAEIKCPLHDFFDL*ENFECRNSAPPSLP
Trigger: TGGCAGGCTTGGTGGAGCACTGTTCCTGCACTCGAAGTTCTCTCAGAGGTCGAAGAAGTCGTGGAGGGGACACTTAATTTCAGCTTTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366855.10
ENST00000683158.1
ENST00000683333.1
ENST00000684236.1
CDS CCA 90 bp CTCGTTTTCCCTATGGCCGACTCTGATGATGAGATGGTGCCCAGATaGGCATCCCAATACTCTGCACCCACTCTGTGTGATCGTGATGTA +
Preference number: 5 (lower is better)
Translates to: LVFPMADSDDEMVPR*ASQYSAPTLCDRDV
Trigger: TACATCACGATCACACAGAGTGGGTGCAGAGTATTGGGATGCCCATCTGGGCACCATCTCATCATCAGAGTCGGCCATAGGGAAAACGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358165.7
CDS-3UTR CAA 90 bp CGACACCTACTTTCTCACCGTCCCATCTGCCTGGTAAACCTTTGTCTCTCTCTGGCTTGTGCTCATGTTTaGAACCATCCAGCCCCTCAC +
Preference number: 5 (lower is better)
Translates to: RHLLSHRPICLVNLCLSLACAHV*NHPAPH
Trigger: GTGAGGGGCTGGATGGTTCAAAACATGAGCACAAGC...CAGAGAGAGACAAAGGTTTACCAGGCAGATGGGACGGTGAGAAAGTAGGTGTCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508775.6
CDS-3UTR CAA 90 bp TGCCACATTGTCCGCATCTACACTGTACGGCCCTCCCCTGTGCCATCCAGCTGGTGTAAAAACATGTGCTaGGATCTGATCTCCATCACT +
Preference number: 5 (lower is better)
Translates to: CHIVRIYTVRPSPVPSSWCKNMC*DLISIT
Trigger: AGTGATGGAGATCAGATCCAAGCACATGTTTTTACA...CCAGCTGGATGGCACAGGGGAGGGCCGTACAGTGTAGATGCGGACAATGTGGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000508775.6
CDS-3UTR CAA 90 bp TGCAGAAGAGGGCTCAGCTCCTCCATTACAGAAGAGACAAAATACAGGGACTGCGAGCACAGAAGCGAGTaGGACAAAGTCCGGGCCTTT +
Preference number: 5 (lower is better)
Translates to: CRRGLSSSITEETKYRDCEHRSE*DKVRAF
Trigger: AAAGGCCCGGACTTTGTCCAACTCGCTTCTGTGCTC...GCAGTCCCTGTATTTTGTCTCTTCTGTAATGGAGGAGCTGAGCCCTCTTCTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508775.6
CDS TCA 90 bp GAAATTAAACTTCAACAGAAAAGATCTGACAGTTCTGGACTATCCTaGGCGCAACAGTGGCAGGGTCCTGGTCTCCCTTGGCTGGCAGGG +
Preference number: 5 (lower is better)
Translates to: EIKLQQKRSDSSGLS*AQQWQGPGLPWLAG
Trigger: CCCTGCCAGCCAAGGGAGACCAGGACCCTGCCACTGTTGCGCTCAGGATAGTCCAGAACTGTCAGATCTTTTCTGTTGAAGTTTAATTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510083.1
CDS TCA 90 bp ACAGCATTGCAAAGCTTCATTCCAGCCTCAGAAATGAAACGGCCATaGTGGGCAGAGGTACATTCAGAGCACTTGGTCACAGCAGGGGAG +
Preference number: 5 (lower is better)
Translates to: TALQSFIPASEMKRP*WAEVHSEHLVTAGE
Trigger: CTCCCCTGCTGTGACCAAGTGCTCTGAATGTACCTCTGCCCATCATGGCCGTTTCATTTCTGAGGCTGGAATGAAGCTTTGCAATGCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000682498.1
CDS TCA 90 bp GAGTGTCTTCAGGGTCAACAGCTGGACCAGCATGTGAAACCTGCCTaGTTCTATCCGCTGGACTGGACAGCATTGCAAAGCTTCATTCCA +
Preference number: 5 (lower is better)
Translates to: ECLQGQQLDQHVKPA*FYPLDWTALQSFIP
Trigger: TGGAATGAAGCTTTGCAATGCTGTCCAGTCCAGCGGATAGAATCAGGCAGGTTTCACATGCTGGTCCAGCTGTTGACCCTGAAGACACTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000682498.1
CDS GCA 90 bp CACCGAGTGGAGCTGGCACACACATCACCACCCGTTTGCCACACCTaGTTTAAAAGACAGCAATTGAAATCGGATTCCAGGCTTATCCTG +
Preference number: 5 (lower is better)
Translates to: HRVELAHTSPPVCHT*FKRQQLKSDSRLIL
Trigger: CAGGATAAGCCTGGAATCCGATTTCAATTGCTGTCTTTTAAAGCAGGTGTGGCAAACGGGTGGTGATGTGTGTGCCAGCTCCACTCGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358165.7
CDS GCA 90 bp AGGAGAGTGTCTTCAGGGTCAACAGCTGGACCAGCATGTGAAACCTaGCTGATTCTATCCGCTGGACTGGACAGCATTGCAAAGCTTCAT +
Preference number: 5 (lower is better)
Translates to: RRVSSGSTAGPACET*LILSAGLDSIAKLH
Trigger: ATGAAGCTTTGCAATGCTGTCCAGTCCAGCGGATAGAATCAGGCAGGTTTCACATGCTGGTCCAGCTGTTGACCCTGAAGACACTCTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000682498.1
CDS-3UTR CAA 90 bp GACACACTCAAAAAGCGCGGTGATCTGAGTTATAGTAAAGCCTGTTTCGTTGGTCAGGATGCTACCTTGTaGGCGTCCCCATCCGCTCTC +
Preference number: 5 (lower is better)
Translates to: DTLKKRGDLSYSKACFVGQDATL*ASPSAL
Trigger: GAGAGCGGATGGGGACGCCAACAAGGTAGCATCCTG...ACCAACGAAACAGGCTTTACTATAACTCAGATCACCGCGCTTTTTGAGTGTGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000508775.6
CDS-3UTR CAA 90 bp CACCATAAGTTCCACTCATCCCTGTGGCCTAGTCCACGGGTCCTCTTTTCCATGCAGAGTCTTACTCTGTaGCCCAAGCTTGAGTACAGT +
Preference number: 5 (lower is better)
Translates to: HHKFHSSLWPSPRVLFSMQSLTL*PKLEYS
Trigger: ACTGTACTCAAGCTTGGGCAACAGAGTAAGACTCTG...CATGGAAAAGAGGACCCGTGGACTAGGCCACAGGGATGAGTGGAACTTATGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508775.6
CDS-3UTR CAA 90 bp CTCCAACAACGGAGCAGCTGGCTAAGGAACGATGTCCTGGGGCTCTGGTCACATGGTGACATTTCAGTTTaGATTAGTGAGGTACCAAGC +
Preference number: 5 (lower is better)
Translates to: LQQRSSWLRNDVLGLWSHGDISV*ISEVPS
Trigger: GCTTGGTACCTCACTAATCAAAACTGAAATGTCACC...ATGTGACCAGAGCCCCAGGACATCGTTCCTTAGCCAGCTGCTCCGTTGTTGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508775.6
CDS TCA 90 bp GATACTCAAAAAGAGGAAGAACCGTCGTTTCACCACCCGCCGCAGTaGAAGCTGAAATTAAGTGTCCCCTCCACGACTTCTTCGACCTCT +
Preference number: 5 (lower is better)
Translates to: DTQKEEEPSFHHPPQ*KLKLSVPSTTSSTS
Trigger: AGAGGTCGAAGAAGTCGTGGAGGGGACACTTAATTTCAGCTTTCACTGCGGCGGGTGGTGAAACGACGGTTCTTCCTCTTTTTGAGTATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000683333.1
CDS TCA 90 bp TGTCATCAAAAAGAGGAAGAACCGTCGTTTCACCACCCGCCGCAGTaGAAGCTGAAATTAAGTGTCCCCTCCACGACTTCTTCGACCTCT +
Preference number: 5 (lower is better)
Translates to: CHQKEEEPSFHHPPQ*KLKLSVPSTTSSTS
Trigger: AGAGGTCGAAGAAGTCGTGGAGGGGACACTTAATTTCAGCTTTCACTGCGGCGGGTGGTGAAACGACGGTTCTTCCTCTTTTTGATGACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000683158.1
CDS GCA 90 bp CACTGCATCATGAATGTTATTCACGACATGGTATGCACACAGCACTaGATCACACGTGTTACCCAGAACCTGGGGCCACACTGGATCACA +
Preference number: 5 (lower is better)
Translates to: HCIMNVIHDMVCTQH*ITRVTQNLGPHWIT
Trigger: TGTGATCCAGTGTGGCCCCAGGTTCTGGGTAACACGTGTGATGCAGTGCTGTGTGCATACCATGTCGTGAATAACATTCATGATGCAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000499370.6
ENST00000683968.1
CDS GCA 90 bp ACACGGTATGTGCACTGCATCATGAATGTTATTCACGACATGGTATaGACACAGCACTGCATCACACGTGTTACCCAGAACCTGGGGCCA +
Preference number: 5 (lower is better)
Translates to: TRYVHCIMNVIHDMV*TQHCITRVTQNLGP
Trigger: TGGCCCCAGGTTCTGGGTAACACGTGTGATGCAGTGCTGTGTGCATACCATGTCGTGAATAACATTCATGATGCAGTGCACATACCGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000499370.6
ENST00000683968.1
CDS-3UTR CAA 90 bp CTCCAACAACGGAGCAGCTGGCTAAGGAACGATGTCCTGGGGCTCTGGTCACATCATCTGTCAGAGATTTaGCTTCAGATAAGAAAACCC +
Preference number: 5 (lower is better)
Translates to: LQQRSSWLRNDVLGLWSHHLSEI*LQIRKP
Trigger: GGGTTTTCTTATCTGAAGCAAAATCTCTGACAGATG...ATGTGACCAGAGCCCCAGGACATCGTTCCTTAGCCAGCTGCTCCGTTGTTGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508775.6
CDS TCA 90 bp AGCCTCAAATTCCTGGGCGCAGGCAATCCTCTGACCTTAGCTTCCTaGATAGCTGAGACCACAGACACATACTATCATGCTCAGCTACTT +
Preference number: 5 (lower is better)
Translates to: SLKFLGAGNPLTLAS*IAETTDTYYHAQLL
Trigger: AAGTAGCTGAGCATGATAGTATGTGTCTGTGGTCTCAGCTATTCAGGAAGCTAAGGTCAGAGGATTGCCTGCGCCCAGGAATTTGAGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358165.7
ENST00000496851.6
ENST00000499370.6
CDS TCA 90 bp GCCAGCAAGGGCCAGCATGCCACAGACTTCCCCAGTGAGAGGCTCTaGACCTCATGGCCAATAAATAAGGACATAAATGTAGCTCTTTTT +
Preference number: 5 (lower is better)
Translates to: ASKGQHATDFPSERL*TSWPINKDINVALF
Trigger: AAAAAGAGCTACATTTATGTCCTTATTTATTGGCCATGAGGTTCAGAGCCTCTCACTGGGGAAGTCTGTGGCATGCTGGCCCTTGCTGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683968.1
CDS GCA 90 bp TACGTTATAAAAGTGAATGTGACTCTTGAAACTGCAGATTCCACCTaGTCTGCCGGACCCTGGAGCACACACTTCTCACAAAGGGAGCCA +
Preference number: 5 (lower is better)
Translates to: YVIKVNVTLETADST*SAGPWSTHFSQREP
Trigger: TGGCTCCCTTTGTGAGAAGTGTGTGCTCCAGGGTCCGGCAGAGCAGGTGGAATCTGCAGTTTCAAGAGTCACATTCACTTTTATAACGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358165.7
ENST00000496851.6
ENST00000499370.6
CDS GCA 90 bp ATCATGCTCAGCTACTTTTACTTCTTTCTAGAGGTCTCACTCTGCTaGCCAGGCTGGTCTCGAAATTCTAGCCACAAGCAATCCTCCAGC +
Preference number: 5 (lower is better)
Translates to: IMLSYFYFFLEVSLC*PGWSRNSSHKQSSS
Trigger: GCTGGAGGATTGCTTGTGGCTAGAATTTCGAGACCAGCCTGGGCAGCAGAGTGAGACCTCTAGAAAGAAGTAAAAGTAGCTGAGCATGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358165.7
ENST00000496851.6
ENST00000499370.6
CDS-3UTR CAA 90 bp CACCATAAGTTCCACTCATCCCTGTGGCCTAGTCCACGGGTCCTCTTTTCCATGAAAACAAATCAGATCTaGTCCCTCTCACAGGCATCA +
Preference number: 5 (lower is better)
Translates to: HHKFHSSLWPSPRVLFSMKTNQI*SLSQAS
Trigger: TGATGCCTGTGAGAGGGACAAGATCTGATTTGTTTT...CATGGAAAAGAGGACCCGTGGACTAGGCCACAGGGATGAGTGGAACTTATGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508775.6
CDS-3UTR CAA 90 bp GACACACTCAAAAAGCGCGGTGATCTGAGTTATAGTAAAGCCTGTTTCGTTGGTCATATGCCACCACTCTaGGAGTGGGCCCAAGAGGAA +
Preference number: 5 (lower is better)
Translates to: DTLKKRGDLSYSKACFVGHMPPL*EWAQEE
Trigger: TTCCTCTTGGGCCCACTCCAAGAGTGGTGGCATATG...ACCAACGAAACAGGCTTTACTATAACTCAGATCACCGCGCTTTTTGAGTGTGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000508775.6
CDS TCA 90 bp TCGCAAATCTTGCCTGCTCAAGTTTGTCCGATCATATCAGTTGCATaGATTATGGGCTGGGGTGGGGGATCCACATATGACAGCCTGTTT +
Preference number: 5 (lower is better)
Translates to: SQILPAQVCPIISVA*IMGWGGGSTYDSLF
Trigger: AAACAGGCTGTCATATGTGGATCCCCCACCCCAGCCCATAATTCATGCAACTGATATGATCGGACAAACTTGAGCAGGCAAGATTTGCGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000683968.1
CDS TCA 90 bp ATCACCAAGGTCTCAAAACCAGTTAGAACTTGGGAAAATGCCCGCTaGCCTATGAAGCCCTCGTGGTCTGAATCAACCATGTTCTCGCAA +
Preference number: 5 (lower is better)
Translates to: ITKVSKPVRTWENAR*PMKPSWSESTMFSQ
Trigger: TTGCGAGAACATGGTTGATTCAGACCACGAGGGCTTCATAGGTCAGCGGGCATTTTCCCAAGTTCTAACTGGTTTTGAGACCTTGGTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000683968.1
CDS GCA 90 bp CTCACACATCTAATTCTGGACTTATCAACTCTGACTCTTGAGTGCTaGTTACTCCACAAGGTCACTAACTTCCTAAGACCCCGACCCCTC +
Preference number: 5 (lower is better)
Translates to: LTHLILDLSTLTLEC*LLHKVTNFLRPRPL
Trigger: GAGGGGTCGGGGTCTTAGGAAGTTAGTGACCTTGTGGAGTAAGCAGCACTCAAGAGTCAGAGTTGATAAGTCCAGAATTAGATGTGTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000682498.1
CDS TCA 90 bp AAATCTTTAAACACAGTCATGCGCCACATTACGACATTCAGTCAGTaGAGGCCTGCATGTACGAGGGCGGTCCCATATGACCACATTTCT +
Preference number: 5 (lower is better)
Translates to: KSLNTVMRHITTFSQ*RPACTRAVPYDHIS
Trigger: AGAAATGTGGTCATATGGGACCGCCCTCGTACATGCAGGCCTTCACTGACTGAATGTCGTAATGTGGCGCATGACTGTGTTTAAAGATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358165.7
CDS GCA 90 bp ATCCTCACACATCTAATTCTGGACTTATCAACTCTGACTCTTGAGTaGTGCTTACTCCACAAGGTCACTAACTTCCTAAGACCCCGACCC +
Preference number: 5 (lower is better)
Translates to: ILTHLILDLSTLTLE*CLLHKVTNFLRPRP
Trigger: GGGTCGGGGTCTTAGGAAGTTAGTGACCTTGTGGAGTAAGCAGCACTCAAGAGTCAGAGTTGATAAGTCCAGAATTAGATGTGTGAGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000682498.1
CDS CCA 90 bp ACACTTCTCACAAAGGGAGCCATGAAATCTGTGCTTCCAAATCACTaGTCTAAGCAGCCTTCAGCTCCTACTCAACATGCGCAGGAAAAT +
Preference number: 5 (lower is better)
Translates to: TLLTKGAMKSVLPNH*SKQPSAPTQHAQEN
Trigger: ATTTTCCTGCGCATGTTGAGTAGGAGCTGAAGGCTGCTTAGACCAGTGATTTGGAAGCACAGATTTCATGGCTCCCTTTGTGAGAAGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358165.7
ENST00000499370.6
CDS-3UTR CAA 90 bp TCGAGTCATGAAAAGACACTGGAGGAACTGCAAACATACATTGCTAAGTGCAAGTTTTTCCACTCATGGTaGTCACGCAGGCGCTTGTCC +
Preference number: 5 (lower is better)
Translates to: SSHEKTLEELQTYIAKCKFFHSW*SRRRLS
Trigger: GGACAAGCGCCTGCGTGACAACCATGAGTGGAAAAA...CTTGCACTTAGCAATGTATGTTTGCAGTTCCTCCAGTGTCTTTTCATGACTCGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000421787.5
CDS-3UTR CAA 90 bp TCGAGTCATGAAAAGACACTGGAGGAACTGCAAACATACATTGCTAAGTGCAAGTTGCAGCTGCTGGTCTaGCTTAGTGAGGCACAGTTC +
Preference number: 5 (lower is better)
Translates to: SSHEKTLEELQTYIAKCKLQLLV*LSEAQF
Trigger: GAACTGTGCCTCACTAAGCAAGACCAGCAGCTGCAA...CTTGCACTTAGCAATGTATGTTTGCAGTTCCTCCAGTGTCTTTTCATGACTCGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421787.5
CDS-3UTR CAA 90 bp GACACACTCAAAAAGCGCGGTGATCTGAGTTATAGTAAAGCCTGTTTCGTTGGTCTCACCTATGCCACATaGTCCGCATCTACACTGTAC +
Preference number: 5 (lower is better)
Translates to: DTLKKRGDLSYSKACFVGLTYAT*SASTLY
Trigger: GTACAGTGTAGATGCGGACAATGTGGCATAGGTGAG...ACCAACGAAACAGGCTTTACTATAACTCAGATCACCGCGCTTTTTGAGTGTGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000508775.6
CDS TCA 90 bp CCACAAACAAATATAAGACTACGTTATAAAAGTGAATGTGACTCTTaGAACTGCAGATTCCACCTGCTCTGCCGGACCCTGGAGCACACA +
Preference number: 5 (lower is better)
Translates to: PQTNIRLRYKSECDS*NCRFHLLCRTLEHT
Trigger: TGTGTGCTCCAGGGTCCGGCAGAGCAGGTGGAATCTGCAGTTTCAAGAGTCACATTCACTTTTATAACGTAGTCTTATATTTGTTTGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358165.7
ENST00000496851.6
ENST00000499370.6
CDS TCA 90 bp AAGCCAGGGCTACTTCACAATACATTGCTTACAACAACACATCCATaGGGAAGCTACACTAGGGCTGGATGTTCTAAGCCAAACGTCAAA +
Preference number: 5 (lower is better)
Translates to: KPGLLHNTLLTTTHP*GSYTRAGCSKPNVK
Trigger: TTTGACGTTTGGCTTAGAACATCCAGCCCTAGTGTAGCTTCCTCATGGATGTGTTGTTGTAAGCAATGTATTGTGAAGTAGCCCTGGCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000682498.1
CDS-3UTR CAA 90 bp GACACACTCAAAAAGCGCGGTGATCTGAGTTATAGTAAAGCCTGTTTCGTTGGTCTGCCTGGTAAACCTTaGTCTCTCTCTGAACATTCT +
Preference number: 5 (lower is better)
Translates to: DTLKKRGDLSYSKACFVGLPGKP*SLSEHS
Trigger: AGAATGTTCAGAGAGAGACAAAGGTTTACCAGGCAG...ACCAACGAAACAGGCTTTACTATAACTCAGATCACCGCGCTTTTTGAGTGTGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000508775.6
CDS TCA 90 bp TTTGATTTTAGGGTGCTACTTCAGATGCCACCAGGACTGTTAACTTaGACACGGTATGTGCACTGCATCATGAATGTTATTCACGACATG +
Preference number: 5 (lower is better)
Translates to: FDFRVLLQMPPGLLT*TRYVHCIMNVIHDM
Trigger: CATGTCGTGAATAACATTCATGATGCAGTGCACATACCGTGTTCAAGTTAACAGTCCTGGTGGCATCTGAAGTAGCACCCTAAAATCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000499370.6
ENST00000683968.1
CDS GCA 90 bp TACCACAAAGCATATGTGTGTCGTGGGCTGTATCAGCTAAGTAAGTaGACTCCAAGATGTTCACATGACAATTTTATACCCCATCACCAA +
Preference number: 5 (lower is better)
Translates to: YHKAYVCRGLYQLSK*TPRCSHDNFIPHHQ
Trigger: TTGGTGATGGGGTATAAAATTGTCATGTGAACATCTTGGAGTGCACTTACTTAGCTGATACAGCCCACGACACACATATGCTTTGTGGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358165.7
CDS-3UTR CAA 90 bp TGTGATTGTATCCTGGTAATTTCATTTCAGGAGCTAGAGCTTGTGAGGAAAAGTACCGTGTGGTCAGAGTaGCATCTTCCTGAGTTGAAT +
Preference number: 5 (lower is better)
Translates to: CDCILVISFQELELVRKSTVWSE*HLPELN
Trigger: ATTCAACTCAGGAAGATGCAACTCTGACCACACGGT...ACTTTTCCTCACAAGCTCTAGCTCCTGAAATGAAATTACCAGGATACAATCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508775.6
CDS-3UTR CAA 90 bp TGTGATTGTATCCTGGTAATTTCATTTCAGGAGCTAGAGCTTGTGAGGAAAAGTCCAGGTTCAATGTCTTaGCTGGTAAAAATGGGCCAC +
Preference number: 5 (lower is better)
Translates to: CDCILVISFQELELVRKSPGSMS*LVKMGH
Trigger: GTGGCCCATTTTTACCAGCAAAGACATTGAACCTGG...ACTTTTCCTCACAAGCTCTAGCTCCTGAAATGAAATTACCAGGATACAATCACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000508775.6
CDS-3UTR CAA 90 bp TCGAGTCATGAAAAGACACTGGAGGAACTGCAAACATACATTGCTAAGTGCAAGCAACGACGTGACAATTaGGAAAAGGTAGTCTTAAGA +
Preference number: 5 (lower is better)
Translates to: SSHEKTLEELQTYIAKCKQRRDN*EKVVLR
Trigger: TCTTAAGACTACCTTTTCCAAATTGTCACGTCGTTG...CTTGCACTTAGCAATGTATGTTTGCAGTTCCTCCAGTGTCTTTTCATGACTCGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421787.5
CDS-3UTR CAA 90 bp TGTCCAAAGCCGCACAACACAGGAGTAAACCCTAATGTTAATGCTAAACTTTATAACTGCAAACATACATaGCTAAGTGCAAGAAGCCAG +
Preference number: 5 (lower is better)
Translates to: CPKPHNTGVNPNVNAKLYNCKHT*LSARSQ
Trigger: CTGGCTTCTTGCACTTAGCAATGTATGTTTGCAGTT...ATAAAGTTTAGCATTAACATTAGGGTTTACTCCTGTGTTGTGCGGCTTTGGACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421787.5
CDS TCA 90 bp AGGGCGGTCCCATATGACCACATTTCTACTGTGCCTTTTCTATGTTaGGATATGTTTAGATACACAAATCCTTACCATTGTGTTACATAC +
Preference number: 5 (lower is better)
Translates to: RAVPYDHISTVPFLC*DMFRYTNPYHCVTY
Trigger: GTATGTAACACAATGGTAAGGATTTGTGTATCTAAACATATCTCAACATAGAAAAGGCACAGTAGAAATGTGGTCATATGGGACCGCCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358165.7
CDS GCA 90 bp CTTAGGAACCCTATTAAAATACATTTAGCAGCTAGTTGCAACATATaGCAACGAGATACAGGTACTGCACTAATAACACAAGCTAAAGCC +
Preference number: 5 (lower is better)
Translates to: LRNPIKIHLAASCNI*QRDTGTALITQAKA
Trigger: GGCTTTAGCTTGTGTTATTAGTGCAGTACCTGTATCTCGTTGGCATATGTTGCAACTAGCTGCTAAATGTATTTTAATAGGGTTCCTAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000682498.1
CDS GCA 90 bp TCAAATACACTTAGGAACCCTATTAAAATACATTTAGCAGCTAGTTaGAACATATGCCAACGAGATACAGGTACTGCACTAATAACACAA +
Preference number: 5 (lower is better)
Translates to: SNTLRNPIKIHLAAS*NICQRDTGTALITQ
Trigger: TTGTGTTATTAGTGCAGTACCTGTATCTCGTTGGCATATGTTGCAACTAGCTGCTAAATGTATTTTAATAGGGTTCCTAAGTGTATTTGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000682498.1
CDS CCA 72 bp CGCTGCAGCAGCGGCCACCGGGTGCGCCCGGAGCCCTaGGACGGCCTAAACCAGTATCTCGCGGGCCCCGCG +
Preference number: 6 (lower is better)
Translates to: RCSSGHRVRPEP*DGLNQYLAGPA
Trigger: CGCGGGGCCCGCGAGATACTGGTTTAGGCCGTCCCAGGGCTCCGGGCGCACCCGGTGGCCGCTGCTGCAGCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000028008.9
ENST00000366855.10
ENST00000421787.5
ENST00000508775.6
ENST00000611959.2
ENST00000620173.5
ENST00000683333.1
ENST00000683770.1
CDS GCA 72 bp GCGACCCGGGCCCCTCGGAGCTCCCCTTCAGGATCGTaGACCAAGCGCGCACGTCCCGGGCTCTGCTTCGCG +
Preference number: 6 (lower is better)
Translates to: ATRAPRSSPSGS*TKRARPGLCFA
Trigger: CGCGAAGCAGAGCCCGGGACGTGCGCGCTTGGTGCACGATCCTGAAGGGGAGCTCCGAGGGGCCCGGGTCGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000028008.9
ENST00000366855.10
ENST00000421787.5
ENST00000508775.6
ENST00000611959.2
ENST00000683333.1
CDS CCA 72 bp CAGCTGTCAGGCTTGGGCGACAGCAGAGATCCCCACTaGGAAGTGCAGCCGGGGGAAGGGCGCACCCACCTG +
Preference number: 6 (lower is better)
Translates to: QLSGLGDSRDPH*EVQPGEGRTHL
Trigger: CAGGTGGGTGCGCCCTTCCCCCGGCTGCACTTCCCAGTGGGGATCTCTGCTGTCGCCCAAGCCTGACAGCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000358165.7
CDS TCA 72 bp TCAAAAACTGCGCCCTGCAAGCTGCCCGGGAGCTCCTaGCTGCAGATGGTGCTTGGCCGCCCAGGCTCCCCG +
Preference number: 6 (lower is better)
Translates to: SKTAPCKLPGSS*LQMVLGRPGSP
Trigger: CGGGGAGCCTGGGCGGCCAAGCACCATCTGCAGTCAGGAGCTCCCGGGCAGCTTGCAGGGCGCAGTTTTTGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358165.7
ENST00000478180.6
CDS TCA 72 bp ACCCCGGCCTACTCAGAGCTCAGCGCTGCTGGAGGATaGGGTCCTCATGTCTATGGCTCCCACCCGGCCCCT +
Preference number: 6 (lower is better)
Translates to: TPAYSELSAAGG*GPHVYGSHPAP
Trigger: AGGGGCCGGGTGGGAGCCATAGACATGAGGACCTCATCCTCCAGCAGCGCTGAGCTCTGAGTAGGCCGGGGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510083.1
CDS CCA 72 bp CCTTCGGAGCATGGGAGCGCTGGGGCCACCACCGAGTaGAGCTGGCACACACATCACCACCCGTTTGCCACA +
Preference number: 6 (lower is better)
Translates to: PSEHGSAGATTE*SWHTHHHPFAT
Trigger: TGTGGCAAACGGGTGGTGATGTGTGTGCCAGCTCCACTCGGTGGTGGCCCCAGCGCTCCCATGCTCCGAAGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358165.7
CDS CCA 72 bp CTGCAGGGCGCATGGTGCCGACTCGGGTCACTCTCCTaGAAACCTCTCCAGTCTCCCGGTGCTAGGTGCTGG +
Preference number: 6 (lower is better)
Translates to: LQGAWCRLGSLS*KPLQSPGARCW
Trigger: CCAGCACCTAGCACCGGGAGACTGGAGAGGTTTCCAGGAGAGTGACCCGAGTCGGCACCATGCGCCCTGCAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476238.6
CDS GCA 72 bp GTGCTGTGGGAGGAGGAACACTGCCTGCCCTGCTGCTaGACACACTCCCGTGAGGAAGGCGGTACACCCCTA +
Preference number: 6 (lower is better)
Translates to: VLWEEEHCLPCC*THSREEGGTPL
Trigger: TAGGGGTGTACCGCCTTCCTCACGGGAGTGTGTGCAGCAGCAGGGCAGGCAGTGTTCCTCCTCCCACAGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000499370.6
ENST00000683968.1
CDS CCA 72 bp CAGGTACCCTTTCCAGTTCCTGACTCCTTCGGAGCATaGGAGCGCTGGGGCCACCACCGAGTGGAGCTGGCA +
Preference number: 6 (lower is better)
Translates to: QVPFPVPDSFGA*ERWGHHRVELA
Trigger: TGCCAGCTCCACTCGGTGGTGGCCCCAGCGCTCCCATGCTCCGAAGGAGTCAGGAACTGGAAAGGGTACCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358165.7
CDS CCA 72 bp GGACACCTGCATCCTCTCAGCCTCGTACTCTGGCTTTaGGGGGCACCAAGCTGGGGTCACCAGCTCCAGCAG +
Preference number: 6 (lower is better)
Translates to: GHLHPLSLVLWL*GAPSWGHQLQQ
Trigger: CTGCTGGAGCTGGTGACCCCAGCTTGGTGCCCCCCAAAGCCAGAGTACGAGGCTGAGAGGATGCAGGTGTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000510083.1
CDS CCA 72 bp CCACCTCCACCAGCGAAGCAGAGGATGCTGTCAACCTaGGCTTCATCCCCAGACCACAAGCCGCTCGCTGCG +
Preference number: 6 (lower is better)
Translates to: PPPPAKQRMLST*ASSPDHKPLAA
Trigger: CGCAGCGAGCGGCTTGTGGTCTGGGGATGAAGCCCAGGTTGACAGCATCCTCTGCTTCGCTGGTGGAGGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510083.1
CDS CAA 72 bp TGCAGGAACAGTGCTCCACCAAGCCTGCCACCTGCTTaGTCGCGTCCTAGGCTGGGAGCAGTCGCAGGCGCT +
Preference number: 6 (lower is better)
Translates to: CRNSAPPSLPPA*SRPRLGAVAGA
Trigger: AGCGCCTGCGACTGCTCCCAGCCTAGGACGCGACAAAGCAGGTGGCAGGCTTGGTGGAGCACTGTTCCTGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366855.10
ENST00000683158.1
ENST00000683333.1
ENST00000684236.1
CDS CAA 90 bp AACTTCGAGTGCAGGAACAGTGCTCCACCAAGCCTGCCACCTGCTTaGTCGCGTCCTAGGCTGGGAGCAGTCGCAGGCGCTTGTCCGCAC +
Preference number: 6 (lower is better)
Translates to: NFECRNSAPPSLPPA*SRPRLGAVAGACPH
Trigger: GTGCGGACAAGCGCCTGCGACTGCTCCCAGCCTAGGACGCGACAAAGCAGGTGGCAGGCTTGGTGGAGCACTGTTCCTGCACTCGAAGTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366855.10
ENST00000683158.1
ENST00000683333.1
ENST00000684236.1
CDS CCA 72 bp GTCTACACCCACTCCCCTGGATCCAGCTGTCAGGCTTaGGCGACAGCAGAGATCCCCACTGGGAAGTGCAGC +
Preference number: 6 (lower is better)
Translates to: VYTHSPGSSCQA*ATAEIPTGKCS
Trigger: GCTGCACTTCCCAGTGGGGATCTCTGCTGTCGCCCAAGCCTGACAGCTGGATCCAGGGGAGTGGGTGTAGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358165.7
CDS CAA 72 bp GGTCTACACCCACTCCCCTGGATCCAGCTGTCAGGCTaGGGCGACAGCAGAGATCCCCACTGGGAAGTGCAG +
Preference number: 6 (lower is better)
Translates to: GLHPLPWIQLSG*GDSRDPHWEVQ
Trigger: CTGCACTTCCCAGTGGGGATCTCTGCTGTCGCCCAAGCCTGACAGCTGGATCCAGGGGAGTGGGTGTAGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358165.7
CDS TCA 72 bp CACAAACTGCTCCAGGCAGGTACCCTTTCCAGTTCCTaGCTCCTTCGGAGCATGGGAGCGCTGGGGCCACCA +
Preference number: 6 (lower is better)
Translates to: HKLLQAGTLSSS*LLRSMGALGPP
Trigger: TGGTGGCCCCAGCGCTCCCATGCTCCGAAGGAGTCAGGAACTGGAAAGGGTACCTGCCTGGAGCAGTTTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358165.7
CDS CCA 72 bp TTTCCAGTTCCTGACTCCTTCGGAGCATGGGAGCGCTaGGGCCACCACCGAGTGGAGCTGGCACACACATCA +
Preference number: 6 (lower is better)
Translates to: FPVPDSFGAWER*GHHRVELAHTS
Trigger: TGATGTGTGTGCCAGCTCCACTCGGTGGTGGCCCCAGCGCTCCCATGCTCCGAAGGAGTCAGGAACTGGAAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358165.7
CDS CCA 72 bp AGCAAACACCCCGGCCTACTCAGAGCTCAGCGCTGCTaGAGGATGAGGTCCTCATGTCTATGGCTCCCACCC +
Preference number: 6 (lower is better)
Translates to: SKHPGLLRAQRC*RMRSSCLWLPP
Trigger: GGGTGGGAGCCATAGACATGAGGACCTCATCCTCCAGCAGCGCTGAGCTCTGAGTAGGCCGGGGTGTTTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510083.1
CDS TCA 72 bp TCGCGGCCCATAAAGCTTTCTCAGCCCTGTCCACTCTaGAGTATCTCTCTCTCCCGACCCCCTCCCCACGGT +
Preference number: 6 (lower is better)
Translates to: SRPIKLSQPCPL*SISLSRPPPHG
Trigger: ACCGTGGGGAGGGGGTCGGGAGAGAGAGATACTTCAGAGTGGACAGGGCTGAGAAAGCTTTATGGGCCGCGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000510083.1
CDS GCA 72 bp CCTCGCTCTACTGAGGGAGTCCTCCCCCACTGCTTCTaGCTCGTGCCTTCTGACTCAAACCTCCTAGGAGGA +
Preference number: 6 (lower is better)
Translates to: PRSTEGVLPHCF*LVPSDSNLLGG
Trigger: TCCTCCTAGGAGGTTTGAGTCAGAAGGCACGAGGCAGAAGCAGTGGGGGAGGACTCCCTCAGTAGAGCGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000510083.1
CDS CAA 72 bp CACCAAGCTGGGGTCACCAGCTCCAGCAGATGCCTTTaGCCCCTTGCCTCAGACACTGTCCACTCCTTCCAC +
Preference number: 6 (lower is better)
Translates to: HQAGVTSSSRCL*PLASDTVHSFH
Trigger: GTGGAAGGAGTGGACAGTGTCTGAGGCAAGGGGCAAAAGGCATCTGCTGGAGCTGGTGACCCCAGCTTGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510083.1
CDS TCA 72 bp CCGAATAGTGCACATGCAGAAGCTGCTGGAGGGCAGTaGGGTCTACACCCACTCCCCTGGATCCAGCTGTCA +
Preference number: 6 (lower is better)
Translates to: PNSAHAEAAGGQ*GLHPLPWIQLS
Trigger: TGACAGCTGGATCCAGGGGAGTGGGTGTAGACCTCACTGCCCTCCAGCAGCTTCTGCATGTGCACTATTCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358165.7
CDS TCA 72 bp AACATGGCAGGCACATGTCCCTCATCTATTCGCACATaGGTCCAGGTGAGGACGGTGAGGGCCCTGCAAGCG +
Preference number: 6 (lower is better)
Translates to: NMAGTCPSSIRT*VQVRTVRALQA
Trigger: CGCTTGCAGGGCCCTCACCGTCCTCACCTGGACTCATGTGCGAATAGATGAGGGACATGTGCCTGCCATGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510083.1
CDS GCA 72 bp ACAAGCAAACACCCCGGCCTACTCAGAGCTCAGCGCTaGTGGAGGATGAGGTCCTCATGTCTATGGCTCCCA +
Preference number: 6 (lower is better)
Translates to: TSKHPGLLRAQR*WRMRSSCLWLP
Trigger: TGGGAGCCATAGACATGAGGACCTCATCCTCCAGCAGCGCTGAGCTCTGAGTAGGCCGGGGTGTTTGCTTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510083.1
CDS GCA 72 bp ACCACAAGCCGCTCGCTGCGGCTCTGTTTTCCTCTCTaGTCCTGTTTCTCTGGAGAGCAGAGCTCTCCTCCT +
Preference number: 6 (lower is better)
Translates to: TTSRSLRLCFPL*SCFSGEQSSPP
Trigger: AGGAGGAGAGCTCTGCTCTCCAGAGAAACAGGAGCAGAGAGGAAAACAGAGCCGCAGCGAGCGGCTTGTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510083.1
CDS CCA 72 bp GGAAGGCGGTACACCCCTACACTAAGAAGGCACGTGTaGTGGCGTCCAGTGCTGAGTGGCGGAGAACATGAA +
Preference number: 6 (lower is better)
Translates to: GRRYTPTLRRHV*WRPVLSGGEHE
Trigger: TTCATGTTCTCCGCCACTCAGCACTGGACGCCACCACACGTGCCTTCTTAGTGTAGGGGTGTACCGCCTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000499370.6
ENST00000683968.1
CDS CCA 72 bp ACGGTGGACACATTCTCCTTCACAGAAGAAAGGCCCTaGGACCCCTCAGCTACCGGTCCCGAAACTGCAAAC +
Preference number: 6 (lower is better)
Translates to: TVDTFSFTEERP*DPSATGPETAN
Trigger: GTTTGCAGTTTCGGGACCGGTAGCTGAGGGGTCCCAGGGCCTTTCTTCTGTGAAGGAGAATGTGTCCACCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510083.1
CDS TCA 72 bp AAAGGACAGGACTCCGAGTATCCACCGTGCTGTTTCTaGTGCCCAAACAAGCGCCGTTCGCACCTGGAAGCA +
Preference number: 6 (lower is better)
Translates to: KGQDSEYPPCCF*CPNKRRSHLEA
Trigger: TGCTTCCAGGTGCGAACGGCGCTTGTTTGGGCATCAGAAACAGCACGGTGGATACTCGGAGTCCTGTCCTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510083.1
CDS TCA 72 bp GCAGGGTCTGATCATCCTCCCCTCTTGCCAAGCTTCTaGCACCAGCAAATGTCACTCCTATGGAGGCCTGAG +
Preference number: 6 (lower is better)
Translates to: AGSDHPPLLPSF*HQQMSLLWRPE
Trigger: CTCAGGCCTCCATAGGAGTGACATTTGCTGGTGTCAGAAGCTTGGCAAGAGGGGAGGATGATCAGACCCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510083.1
CDS CCA 72 bp TTCGGCACATGCTGGTTGGAGTCCTCGTTTTCCCTATaGCCGACTCTGATGATGAGATGGTGCCCAGATGGG +
Preference number: 6 (lower is better)
Translates to: FGTCWLESSFSL*PTLMMRWCPDG
Trigger: CCCATCTGGGCACCATCTCATCATCAGAGTCGGCCATAGGGAAAACGAGGACTCCAACCAGCATGTGCCGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358165.7
CDS CAA 72 bp CAGACTGTCTTGGCCACAGAGTTCGGCACATGCTGGTaGGAGTCCTCGTTTTCCCTATGGCCGACTCTGATG +
Preference number: 6 (lower is better)
Translates to: QTVLATEFGTCW*ESSFSLWPTLM
Trigger: CATCAGAGTCGGCCATAGGGAAAACGAGGACTCCAACCAGCATGTGCCGAACTCTGTGGCCAAGACAGTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358165.7
CDS TCA 72 bp CAGGGTCAACAGCTGGACCAGCATGTGAAACCTGCCTaGTTCTATCCGCTGGACTGGACAGCATTGCAAAGC +
Preference number: 6 (lower is better)
Translates to: QGQQLDQHVKPA*FYPLDWTALQS
Trigger: GCTTTGCAATGCTGTCCAGTCCAGCGGATAGAATCAGGCAGGTTTCACATGCTGGTCCAGCTGTTGACCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000682498.1
CDS TCA 72 bp GAGAGTGTCTTCAGGGTCAACAGCTGGACCAGCATGTaGAACCTGCCTGATTCTATCCGCTGGACTGGACAG +
Preference number: 6 (lower is better)
Translates to: ESVFRVNSWTSM*NLPDSIRWTGQ
Trigger: CTGTCCAGTCCAGCGGATAGAATCAGGCAGGTTTCACATGCTGGTCCAGCTGTTGACCCTGAAGACACTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000682498.1
CDS GCA 72 bp TCGTTTTCCCTATGGCCGACTCTGATGATGAGATGGTaGCCAGATGGGCATCCCAATACTCTGCACCCACTC +
Preference number: 6 (lower is better)
Translates to: SFSLWPTLMMRW*PDGHPNTLHPL
Trigger: GAGTGGGTGCAGAGTATTGGGATGCCCATCTGGGCACCATCTCATCATCAGAGTCGGCCATAGGGAAAACGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358165.7
CDS CCA 72 bp CCTATGGCCGACTCTGATGATGAGATGGTGCCCAGATaGGCATCCCAATACTCTGCACCCACTCTGTGTGAT +
Preference number: 6 (lower is better)
Translates to: PMADSDDEMVPR*ASQYSAPTLCD
Trigger: ATCACACAGAGTGGGTGCAGAGTATTGGGATGCCCATCTGGGCACCATCTCATCATCAGAGTCGGCCATAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358165.7
CDS CCA 72 bp TCCTCGTTTTCCCTATGGCCGACTCTGATGATGAGATaGTGCCCAGATGGGCATCCCAATACTCTGCACCCA +
Preference number: 6 (lower is better)
Translates to: SSFSLWPTLMMR*CPDGHPNTLHP
Trigger: TGGGTGCAGAGTATTGGGATGCCCATCTGGGCACCATCTCATCATCAGAGTCGGCCATAGGGAAAACGAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358165.7
CDS CCA 72 bp GCCACCCCTGTAATCAGTTCCCTGAACACCGAGCTCTaGGCAAACATGGCAGGCACATGTCCCTCATCTATT +
Preference number: 6 (lower is better)
Translates to: ATPVISSLNTEL*ANMAGTCPSSI
Trigger: AATAGATGAGGGACATGTGCCTGCCATGTTTGCCCAGAGCTCGGTGTTCAGGGAACTGATTACAGGGGTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510083.1
CDS TCA 72 bp AACACAGTCATGCGCCACATTACGACATTCAGTCAGTaGAGGCCTGCATGTACGAGGGCGGTCCCATATGAC +
Preference number: 6 (lower is better)
Translates to: NTVMRHITTFSQ*RPACTRAVPYD
Trigger: GTCATATGGGACCGCCCTCGTACATGCAGGCCTTCACTGACTGAATGTCGTAATGTGGCGCATGACTGTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358165.7
CDS TCA 72 bp CTTCAACAGAAAAGATCTGACAGTTCTGGACTATCCTaGGCGCAACAGTGGCAGGGTCCTGGTCTCCCTTGG +
Preference number: 6 (lower is better)
Translates to: LQQKRSDSSGLS*AQQWQGPGLPW
Trigger: CCAAGGGAGACCAGGACCCTGCCACTGTTGCGCTCAGGATAGTCCAGAACTGTCAGATCTTTTCTGTTGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510083.1
CDS TCA 72 bp CTCATGGTTGTCACGTCGTTTCACCACCCGCCGCAGTaGAAGCTGAAATTAAGTGTCCCCTCCACGACTTCT +
Preference number: 6 (lower is better)
Translates to: LMVVTSFHHPPQ*KLKLSVPSTTS
Trigger: AGAAGTCGTGGAGGGGACACTTAATTTCAGCTTTCACTGCGGCGGGTGGTGAAACGACGTGACAACCATGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000684236.1
CDS GCA 72 bp TCTTCAGGGTCAACAGCTGGACCAGCATGTGAAACCTaGCTGATTCTATCCGCTGGACTGGACAGCATTGCA +
Preference number: 6 (lower is better)
Translates to: SSGSTAGPACET*LILSAGLDSIA
Trigger: TGCAATGCTGTCCAGTCCAGCGGATAGAATCAGGCAGGTTTCACATGCTGGTCCAGCTGTTGACCCTGAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000682498.1
CDS TCA 72 bp GAAATTAAGTGTCCCCTCCACGACTTCTTCGACCTCTaGGAGAACTTCGAGTGCAGGAACAGTGCTCCACCA +
Preference number: 6 (lower is better)
Translates to: EIKCPLHDFFDL*ENFECRNSAPP
Trigger: TGGTGGAGCACTGTTCCTGCACTCGAAGTTCTCTCAGAGGTCGAAGAAGTCGTGGAGGGGACACTTAATTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366855.10
ENST00000683158.1
ENST00000683333.1
ENST00000684236.1
CDS TCA 72 bp AAAGAGGAAGAACCGTCGTTTCACCACCCGCCGCAGTaGAAGCTGAAATTAAGTGTCCCCTCCACGACTTCT +
Preference number: 6 (lower is better)
Translates to: KEEEPSFHHPPQ*KLKLSVPSTTS
Trigger: AGAAGTCGTGGAGGGGACACTTAATTTCAGCTTTCACTGCGGCGGGTGGTGAAACGACGGTTCTTCCTCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000683158.1
ENST00000683333.1
CDS TCA 72 bp GGAAAATGCCCGCTGACCTATGAAGCCCTCGTGGTCTaGATCAACCATGTTCTCGCAAATCTTGCCTGCTCA +
Preference number: 6 (lower is better)
Translates to: GKCPLTYEALVV*INHVLANLACS
Trigger: TGAGCAGGCAAGATTTGCGAGAACATGGTTGATTCAGACCACGAGGGCTTCATAGGTCAGCGGGCATTTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683968.1
CDS GCA 72 bp CACCGAGTGGAGCTGGCACACACATCACCACCCGTTTaGCACACCTGCTTTAAAAGACAGCAATTGAAATCG +
Preference number: 6 (lower is better)
Translates to: HRVELAHTSPPV*HTCFKRQQLKS
Trigger: CGATTTCAATTGCTGTCTTTTAAAGCAGGTGTGGCAAACGGGTGGTGATGTGTGTGCCAGCTCCACTCGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358165.7
CDS TCA 72 bp TTCCTGGGCGCAGGCAATCCTCTGACCTTAGCTTCCTaGATAGCTGAGACCACAGACACATACTATCATGCT +
Preference number: 6 (lower is better)
Translates to: FLGAGNPLTLAS*IAETTDTYYHA
Trigger: AGCATGATAGTATGTGTCTGTGGTCTCAGCTATTCAGGAAGCTAAGGTCAGAGGATTGCCTGCGCCCAGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358165.7
ENST00000496851.6
ENST00000499370.6
CDS GCA 72 bp GAGCTGGCACACACATCACCACCCGTTTGCCACACCTaGTTTAAAAGACAGCAATTGAAATCGGATTCCAGG +
Preference number: 6 (lower is better)
Translates to: ELAHTSPPVCHT*FKRQQLKSDSR
Trigger: CCTGGAATCCGATTTCAATTGCTGTCTTTTAAAGCAGGTGTGGCAAACGGGTGGTGATGTGTGTGCCAGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358165.7
CDS GCA 72 bp AAAGTGAATGTGACTCTTGAAACTGCAGATTCCACCTaGTCTGCCGGACCCTGGAGCACACACTTCTCACAA +
Preference number: 6 (lower is better)
Translates to: KVNVTLETADST*SAGPWSTHFSQ
Trigger: TTGTGAGAAGTGTGTGCTCCAGGGTCCGGCAGAGCAGGTGGAATCTGCAGTTTCAAGAGTCACATTCACTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358165.7
ENST00000496851.6
ENST00000499370.6
CDS GCA 72 bp ATGCTCAAGAGAAATGCAGACCCACGATCCCTCCCCTaGATTCGTGAAACCCATAAAAGCCTGAAACCTGGT +
Preference number: 6 (lower is better)
Translates to: MLKRNADPRSLP*IRETHKSLKPG
Trigger: ACCAGGTTTCAGGCTTTTATGGGTTTCACGAATGCAGGGGAGGGATCGTGGGTCTGCATTTCTCTTGAGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000499370.6
ENST00000683968.1
CDS CAA 90 bp TGTTCTCGCAAATCTTGCCTGCTCAAGTTTGTCCGATCATATCAGTaGCATGAATTATGGGCTGGGGTGGGGGATCCACATATGACAGCC +
Preference number: 6 (lower is better)
Translates to: CSRKSCLLKFVRSYQ*HELWAGVGDPHMTA
Trigger: GGCTGTCATATGTGGATCCCCCACCCCAGCCCATAATTCATGCAACTGATATGATCGGACAAACTTGAGCAGGCAAGATTTGCGAGAACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000683968.1
CDS TCA 72 bp TCAGTGAAGGCCTGCATGTACGAGGGCGGTCCCATATaGCCACATTTCTACTGTGCCTTTTCTATGTTGAGA +
Preference number: 6 (lower is better)
Translates to: SVKACMYEGGPI*PHFYCAFSMLR
Trigger: TCTCAACATAGAAAAGGCACAGTAGAAATGTGGTCATATGGGACCGCCCTCGTACATGCAGGCCTTCACTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358165.7
CDS TCA 72 bp GGCCAGCATGCCACAGACTTCCCCAGTGAGAGGCTCTaGACCTCATGGCCAATAAATAAGGACATAAATGTA +
Preference number: 6 (lower is better)
Translates to: GQHATDFPSERL*TSWPINKDINV
Trigger: TACATTTATGTCCTTATTTATTGGCCATGAGGTTCAGAGCCTCTCACTGGGGAAGTCTGTGGCATGCTGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683968.1
CDS TCA 72 bp TTGCCTGCTCAAGTTTGTCCGATCATATCAGTTGCATaGATTATGGGCTGGGGTGGGGGATCCACATATGAC +
Preference number: 6 (lower is better)
Translates to: LPAQVCPIISVA*IMGWGGGSTYD
Trigger: GTCATATGTGGATCCCCCACCCCAGCCCATAATTCATGCAACTGATATGATCGGACAAACTTGAGCAGGCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000683968.1
CDS TCA 72 bp GTCTCAAAACCAGTTAGAACTTGGGAAAATGCCCGCTaGCCTATGAAGCCCTCGTGGTCTGAATCAACCATG +
Preference number: 6 (lower is better)
Translates to: VSKPVRTWENAR*PMKPSWSESTM
Trigger: CATGGTTGATTCAGACCACGAGGGCTTCATAGGTCAGCGGGCATTTTCCCAAGTTCTAACTGGTTTTGAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000683968.1
CDS GCA 72 bp GGGACAAAACGGGTCCTTCAGATGGGGCGATTAATGTaGACAGTTCAGCGTCACAAGTATGTCCATGTTACA +
Preference number: 6 (lower is better)
Translates to: GTKRVLQMGRLM*TVQRHKYVHVT
Trigger: TGTAACATGGACATACTTGTGACGCTGAACTGTGCACATTAATCGCCCCATCTGAAGGACCCGTTTTGTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000682498.1
CDS CCA 72 bp ACAAAGGGAGCCATGAAATCTGTGCTTCCAAATCACTaGTCTAAGCAGCCTTCAGCTCCTACTCAACATGCG +
Preference number: 6 (lower is better)
Translates to: TKGAMKSVLPNH*SKQPSAPTQHA
Trigger: CGCATGTTGAGTAGGAGCTGAAGGCTGCTTAGACCAGTGATTTGGAAGCACAGATTTCATGGCTCCCTTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358165.7
ENST00000499370.6
CDS CCA 72 bp CTCAAGTTTGTCCGATCATATCAGTTGCATGAATTATaGGCTGGGGTGGGGGATCCACATATGACAGCCTGT +
Preference number: 6 (lower is better)
Translates to: LKFVRSYQLHEL*AGVGDPHMTAC
Trigger: ACAGGCTGTCATATGTGGATCCCCCACCCCAGCCCATAATTCATGCAACTGATATGATCGGACAAACTTGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000683968.1
CDS GCA 72 bp AGCTACTTTTACTTCTTTCTAGAGGTCTCACTCTGCTaGCCAGGCTGGTCTCGAAATTCTAGCCACAAGCAA +
Preference number: 6 (lower is better)
Translates to: SYFYFFLEVSLC*PGWSRNSSHKQ
Trigger: TTGCTTGTGGCTAGAATTTCGAGACCAGCCTGGGCAGCAGAGTGAGACCTCTAGAAAGAAGTAAAAGTAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358165.7
ENST00000496851.6
ENST00000499370.6
CDS GCA 72 bp GTGCACTGCATCATGAATGTTATTCACGACATGGTATaGACACAGCACTGCATCACACGTGTTACCCAGAAC +
Preference number: 6 (lower is better)
Translates to: VHCIMNVIHDMV*TQHCITRVTQN
Trigger: GTTCTGGGTAACACGTGTGATGCAGTGCTGTGTGCATACCATGTCGTGAATAACATTCATGATGCAGTGCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000499370.6
ENST00000683968.1
CDS GCA 72 bp AATCTTGCCTGCTCAAGTTTGTCCGATCATATCAGTTaGATGAATTATGGGCTGGGGTGGGGGATCCACATA +
Preference number: 6 (lower is better)
Translates to: NLACSSLSDHIS*MNYGLGWGIHI
Trigger: TATGTGGATCCCCCACCCCAGCCCATAATTCATGCAACTGATATGATCGGACAAACTTGAGCAGGCAAGATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000683968.1
CDS CAA 72 bp AAATCTTGCCTGCTCAAGTTTGTCCGATCATATCAGTaGCATGAATTATGGGCTGGGGTGGGGGATCCACAT +
Preference number: 6 (lower is better)
Translates to: KSCLLKFVRSYQ*HELWAGVGDPH
Trigger: ATGTGGATCCCCCACCCCAGCCCATAATTCATGCAACTGATATGATCGGACAAACTTGAGCAGGCAAGATTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000683968.1
CDS CAA 72 bp CCCTCGTGGTCTGAATCAACCATGTTCTCGCAAATCTaGCCTGCTCAAGTTTGTCCGATCATATCAGTTGCA +
Preference number: 6 (lower is better)
Translates to: PSWSESTMFSQI*PAQVCPIISVA
Trigger: TGCAACTGATATGATCGGACAAACTTGAGCAGGCAAGATTTGCGAGAACATGGTTGATTCAGACCACGAGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683968.1
CDS CAA 90 bp CACACATCACCACCCGTTTGCCACACCTGCTTTAAAAGACAGCAATaGAAATCGGATTCCAGGCTTATCCTGGTAAACTGCATTTGGACA +
Preference number: 6 (lower is better)
Translates to: HTSPPVCHTCFKRQQ*KSDSRLILVNCIWT
Trigger: TGTCCAAATGCAGTTTACCAGGATAAGCCTGGAATCCGATTTCAATTGCTGTCTTTTAAAGCAGGTGTGGCAAACGGGTGGTGATGTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358165.7
CDS GCA 72 bp CCTCGTGGTCTGAATCAACCATGTTCTCGCAAATCTTaGCTGCTCAAGTTTGTCCGATCATATCAGTTGCAT +
Preference number: 6 (lower is better)
Translates to: PRGLNQPCSRKS*LLKFVRSYQLH
Trigger: ATGCAACTGATATGATCGGACAAACTTGAGCAGGCAAGATTTGCGAGAACATGGTTGATTCAGACCACGAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683968.1
CDS GCA 72 bp CTAATTCTGGACTTATCAACTCTGACTCTTGAGTGCTaGTTACTCCACAAGGTCACTAACTTCCTAAGACCC +
Preference number: 6 (lower is better)
Translates to: LILDLSTLTLEC*LLHKVTNFLRP
Trigger: GGGTCTTAGGAAGTTAGTGACCTTGTGGAGTAAGCAGCACTCAAGAGTCAGAGTTGATAAGTCCAGAATTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000682498.1
CDS CCA 72 bp ATCACAGAGTGGACACAAAGACTTAGACATCCTCTGTaGGCAATAACTTATTGTCAGACTGTCTTGGCCACA +
Preference number: 6 (lower is better)
Translates to: ITEWTQRLRHPL*AITYCQTVLAT
Trigger: TGTGGCCAAGACAGTCTGACAATAAGTTATTGCCCACAGAGGATGTCTAAGTCTTTGTGTCCACTCTGTGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358165.7
CDS TCA 72 bp AATATAAGACTACGTTATAAAAGTGAATGTGACTCTTaGAACTGCAGATTCCACCTGCTCTGCCGGACCCTG +
Preference number: 6 (lower is better)
Translates to: NIRLRYKSECDS*NCRFHLLCRTL
Trigger: CAGGGTCCGGCAGAGCAGGTGGAATCTGCAGTTTCAAGAGTCACATTCACTTTTATAACGTAGTCTTATATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358165.7
ENST00000496851.6
ENST00000499370.6
CDS TCA 72 bp CTCTGGAAAAATGGCTGCACAGGTAAGCAGACACCATaGGAGCAAAGACACTGTTGCCAATTTATTTCACAA +
Preference number: 6 (lower is better)
Translates to: LWKNGCTGKQTP*EQRHCCQFISQ
Trigger: TTGTGAAATAAATTGGCAACAGTGTCTTTGCTCTCATGGTGTCTGCTTACCTGTGCAGCCATTTTTCCAGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000510083.1
CDS GCA 72 bp GCATATGTGTGTCGTGGGCTGTATCAGCTAAGTAAGTaGACTCCAAGATGTTCACATGACAATTTTATACCC +
Preference number: 6 (lower is better)
Translates to: AYVCRGLYQLSK*TPRCSHDNFIP
Trigger: GGGTATAAAATTGTCATGTGAACATCTTGGAGTGCACTTACTTAGCTGATACAGCCCACGACACACATATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358165.7
CDS CAA 72 bp ATCAACCATGTTCTCGCAAATCTTGCCTGCTCAAGTTaGTCCGATCATATCAGTTGCATGAATTATGGGCTG +
Preference number: 6 (lower is better)
Translates to: INHVLANLACSS*SDHISCMNYGL
Trigger: CAGCCCATAATTCATGCAACTGATATGATCGGACAAACTTGAGCAGGCAAGATTTGCGAGAACATGGTTGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683968.1
CDS GCA 72 bp GTACGAGGGCGGTCCCATATGACCACATTTCTACTGTaGCTTTTCTATGTTGAGATATGTTTAGATACACAA +
Preference number: 6 (lower is better)
Translates to: VRGRSHMTTFLL*LFYVEICLDTQ
Trigger: TTGTGTATCTAAACATATCTCAACATAGAAAAGGCACAGTAGAAATGTGGTCATATGGGACCGCCCTCGTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358165.7
CDS GCA 72 bp CATCTAATTCTGGACTTATCAACTCTGACTCTTGAGTaGTGCTTACTCCACAAGGTCACTAACTTCCTAAGA +
Preference number: 6 (lower is better)
Translates to: HLILDLSTLTLE*CLLHKVTNFLR
Trigger: TCTTAGGAAGTTAGTGACCTTGTGGAGTAAGCAGCACTCAAGAGTCAGAGTTGATAAGTCCAGAATTAGATG
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000682498.1
CDS GCA 72 bp ATTGGTATCTTCCACAGAATTAAAGTTGGAGTTCTTTaGAGCACCGCCTGTTTACCCCTAATTAATTTGGGC +
Preference number: 6 (lower is better)
Translates to: IGIFHRIKVGVL*STACLPLINLG
Trigger: GCCCAAATTAATTAGGGGTAAACAGGCGGTGCTGCAAAGAACTCCAACTTTAATTCTGTGGAAGATACCAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683968.1
CDS CCA 72 bp CCCATAAAACAGATGAGTGGATACGTGGCTGGATGCTaGATGCAAAAGCAACAAATTTCTCCTGATGATAAA +
Preference number: 6 (lower is better)
Translates to: PIKQMSGYVAGC*MQKQQISPDDK
Trigger: TTTATCATCAGGAGAAATTTGTTGCTTTTGCATCCAGCATCCAGCCACGTATCCACTCATCTGTTTTATGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510083.1
CDS CAA 72 bp GAAATCGGATTCCAGGCTTATCCTGGTAAACTGCATTaGGACAAATCTTTAAACACAGTCATGCGCCACATT +
Preference number: 6 (lower is better)
Translates to: EIGFQAYPGKLH*DKSLNTVMRHI
Trigger: AATGTGGCGCATGACTGTGTTTAAAGATTTGTCCAAATGCAGTTTACCAGGATAAGCCTGGAATCCGATTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358165.7
CDS CAA 90 bp ACAGCAATTGAAATCGGATTCCAGGCTTATCCTGGTAAACTGCATTaGGACAAATCTTTAAACACAGTCATGCGCCACATTACGACATTC +
Preference number: 6 (lower is better)
Translates to: TAIEIGFQAYPGKLH*DKSLNTVMRHITTF
Trigger: GAATGTCGTAATGTGGCGCATGACTGTGTTTAAAGATTTGTCCAAATGCAGTTTACCAGGATAAGCCTGGAATCCGATTTCAATTGCTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358165.7
CDS CAA 90 bp AATTCTGAATCATTGCAGAAGAATATCCTAGTTCCCCATCAAGCCTaGGTAGAAAATTCTAGATCACGATCACAGAGTGGACACAAAGAC +
Preference number: 6 (lower is better)
Translates to: NSESLQKNILVPHQA*VENSRSRSQSGHKD
Trigger: GTCTTTGTGTCCACTCTGTGATCGTGATCTAGAATTTTCTACCAAGGCTTGATGGGGAACTAGGATATTCTTCTGCAATGATTCAGAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358165.7
CDS GCA 72 bp CCTATTAAAATACATTTAGCAGCTAGTTGCAACATATaGCAACGAGATACAGGTACTGCACTAATAACACAA +
Preference number: 6 (lower is better)
Translates to: PIKIHLAASCNI*QRDTGTALITQ
Trigger: TTGTGTTATTAGTGCAGTACCTGTATCTCGTTGGCATATGTTGCAACTAGCTGCTAAATGTATTTTAATAGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000682498.1
CDS TCA 72 bp CCATATGACCACATTTCTACTGTGCCTTTTCTATGTTaGGATATGTTTAGATACACAAATCCTTACCATTGT +
Preference number: 6 (lower is better)
Translates to: PYDHISTVPFLC*DMFRYTNPYHC
Trigger: ACAATGGTAAGGATTTGTGTATCTAAACATATCTCAACATAGAAAAGGCACAGTAGAAATGTGGTCATATGG
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358165.7