Pregenerated sensors for RNASEH2A (Homo sapiens)
Ensembl gene IDs: ENSG00000104889Ensembl transcript IDs: ENST00000221486.6, ENST00000590121.2, ENST00000590279.2, ENST00000593017.2, ENST00000643757.1, ENST00000646769.1
Found 97 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CATCTTCCGCCTCTTTCTCCAGGATGGTCTGGGCCGTGCGCCAGCTaGACCGGACAAACTGGGGGAAGCCGAACACAGGCTCCACGTGCT | + |
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Preference number: 1 (lower is better) Translates to: HLPPLSPGWSGPCAS*TGQTGGSRTQAPRA Trigger: AGCACGTGGAGCCTGTGTTCGGCTTCCCCCAGTTTGTCCGGTTCAGCTGGCGCACGGCCCAGACCATCCTGGAGAAAGAGGCGGAAGATG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000646769.1 |
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| 3UTR CCA 90 bp | AATCAACCAACACCCATTCTATTTAAGGTTCCAAAAGGAAGTAGCTaGACCCGGCTGCAGAGCACACTCCCACCTTGCTTCTGTCCCAAA | + |
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Preference number: 1 (lower is better) Translates to: NQPTPILFKVPKGSS*TRLQSTLPPCFCPK Trigger: TTTGGGACAGAAGCAAGGTGGGAGTGTGCTCTGCAGCCGGGTCCAGCTACTTCCTTTTGGAACCTTAAATAGAATGGGTGTTGGTTGATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000221486.6 |
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| 3UTR-3UTR GCA 90 bp | CTGCCATTTCTTCACGGCCTGGTCCCGGGCCACCTTGGCACAGATGCTGGCAGCCGGGTAGAGGGCATCTaGTTTGGCCTTGACCGTCAC | + |
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Preference number: 2 (lower is better) Translates to: LPFLHGLVPGHLGTDAGSRVEGI*FGLDRH Trigger: GTGACGGTCAAGGCCAAAGCAGATGCCCTCTACCCG...GCTGCCAGCATCTGTGCCAAGGTGGCCCGGGACCAGGCCGTGAAGAAATGGCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000646769.1 |
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| 3UTR-3UTR TCA 90 bp | GCTGGTCTCGAACTCTTGACCTCCGGTGATCTACCCGCCGCGGCTTCCCAAAGTTGGAGTGCTGTGGCATaGTCATGGCTCACTGCAGTC | + |
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Preference number: 2 (lower is better) Translates to: AGLELLTSGDLPAAASQSWSAVA*SWLTAV Trigger: GACTGCAGTGAGCCATGATCATGCCACAGCACTCCA...ACTTTGGGAAGCCGCGGCGGGTAGATCACCGGAGGTCAAGAGTTCGAGACCAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000590121.2 |
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| 3UTR-3UTR GCA 90 bp | ATGGTCTGGGCCGTGCGCCAGCTGAACCGGACAAACTGGGGGAAGCCGAACACAAGTTTCTCCACGAACTaGCATTTCTTCACGGCCTGG | + |
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Preference number: 2 (lower is better) Translates to: MVWAVRQLNRTNWGKPNTSFSTN*HFFTAW Trigger: CCAGGCCGTGAAGAAATGGCAGTTCGTGGAGAAACT...TGTGTTCGGCTTCCCCCAGTTTGTCCGGTTCAGCTGGCGCACGGCCCAGACCAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000646769.1 |
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| 3UTR-3UTR CCA 90 bp | GCTGGTCTCGAACTCTTGACCTCCGGTGATCTACCCGCCGCGGCTTCCCAAAGTCAGGATGGAGTGCTGTaGCATGATCATGGCTCACTG | + |
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Preference number: 2 (lower is better) Translates to: AGLELLTSGDLPAAASQSQDGVL*HDHGSL Trigger: CAGTGAGCCATGATCATGCCACAGCACTCCATCCTG...ACTTTGGGAAGCCGCGGCGGGTAGATCACCGGAGGTCAAGAGTTCGAGACCAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000590121.2 |
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| 3UTR-3UTR GCA 90 bp | CCTGCAGTTTCTCCACGAACTGCCATTTCTTCACGGCCTGGTCCCGGGCCACCTCACGCCCTGGTCCAATaGATACTGTATAAGCCCAGT | + |
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Preference number: 2 (lower is better) Translates to: PAVSPRTAISSRPGPGPPHALVQ*ILYKPS Trigger: ACTGGGCTTATACAGTATGCATTGGACCAGGGCGTG...AGGTGGCCCGGGACCAGGCCGTGAAGAAATGGCAGTTCGTGGAGAAACTGCAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000646769.1 |
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| 3UTR-3UTR GCA 90 bp | CGTGCTCCTTCAACCACGCTTTTGTCTTGGGATCATTGGGGTAGCCTGAGCCATTCAGTATCCAAGTCCTaGAGTTTCTCCACGAACTGC | + |
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Preference number: 2 (lower is better) Translates to: RAPSTTLLSWDHWGSLSHSVSKS*SFSTNC Trigger: GCAGTTCGTGGAGAAACTGCAGGACTTGGATACTGA...ATGGCTCAGGCTACCCCAATGATCCCAAGACAAAAGCGTGGTTGAAGGAGCACG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000646769.1 |
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| 3UTR GCA 72 bp | AGTAGCTGGACCCGGCTGCAGAGCACACTCCCACCTTaGTTCTGTCCCAAAAGTACATCCCCTACGTGTGGT | + |
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Preference number: 3 (lower is better) Translates to: SSWTRLQSTLPP*FCPKSTSPTCG Trigger: ACCACACGTAGGGGATGTACTTTTGGGACAGAAGCAAGGTGGGAGTGTGCTCTGCAGCCGGGTCCAGCTACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000221486.6 |
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| 3UTR-3UTR CAA 90 bp | GCTGGTCTCGAACTCTTGACCTCCGGTGATCTACCCGCCGCGGCTTCCCAAAGTTCTCGAACTCCTGTTTaGTCCCCATTTTATCCTGAG | + |
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Preference number: 3 (lower is better) Translates to: AGLELLTSGDLPAAASQSSRTPV*SPFYPE Trigger: CTCAGGATAAAATGGGGACAAAACAGGAGTTCGAGA...ACTTTGGGAAGCCGCGGCGGGTAGATCACCGGAGGTCAAGAGTTCGAGACCAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000590121.2 |
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| 3UTR CCA 72 bp | ACACCCATTCTATTTAAGGTTCCAAAAGGAAGTAGCTaGACCCGGCTGCAGAGCACACTCCCACCTTGCTTC | + |
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Preference number: 3 (lower is better) Translates to: TPILFKVPKGSS*TRLQSTLPPCF Trigger: GAAGCAAGGTGGGAGTGTGCTCTGCAGCCGGGTCCAGCTACTTCCTTTTGGAACCTTAAATAGAATGGGTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000221486.6 |
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| CDS-3UTR TCA 90 bp | GCCGTGCGCCAGCTGAACCGGACAAACTGGGGGAAGCCGAACACAGGCTCCACGGGGCCGTGCGCCAGCTaGACCGGACAAACTGGGGGA | + |
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Preference number: 4 (lower is better) Translates to: AVRQLNRTNWGKPNTGSTGPCAS*TGQTGG Trigger: TCCCCCAGTTTGTCCGGTTCAGCTGGCGCACGGCCC...CGTGGAGCCTGTGTTCGGCTTCCCCCAGTTTGTCCGGTTCAGCTGGCGCACGGC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000646769.1 |
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| CDS-3UTR GCA 90 bp | GCTGGTCTCGAACTCTTGACCTCCGGTGATCTACCCGCCGCGGCTTCCCAAAGTCCAGCACGGGGCCCCTaGCCGCCTCATCGACGCCCA | + |
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Preference number: 4 (lower is better) Translates to: AGLELLTSGDLPAAASQSPARGP*PPHRRP Trigger: TGGGCGTCGATGAGGCGGGCAGGGGCCCCGTGCTGG...ACTTTGGGAAGCCGCGGCGGGTAGATCACCGGAGGTCAAGAGTTCGAGACCAGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000590121.2 |
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| CDS-3UTR GCA 90 bp | AACTGCCATTTCTTCACGGCCTGGTCCCGGGCCACCTTGGCACAGATGCTGGCACCAGCACGGGGCCCCTaGCCGCCTCATCGACGCCCA | + |
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Preference number: 4 (lower is better) Translates to: NCHFFTAWSRATLAQMLAPARGP*PPHRRP Trigger: TGGGCGTCGATGAGGCGGGCAGGGGCCCCGTGCTGG...TGCCAGCATCTGTGCCAAGGTGGCCCGGGACCAGGCCGTGAAGAAATGGCAGTT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000646769.1 |
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| CDS-3UTR CCA 90 bp | GCTGGTCTCGAACTCTTGACCTCCGGTGATCTACCCGCCGCGGCTTCCCAAAGTAGATGGCGTAGACCATaGGGCCCAGCACGGGGCCCC | + |
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Preference number: 4 (lower is better) Translates to: AGLELLTSGDLPAAASQSRWRRP*GPARGP Trigger: GGGGCCCCGTGCTGGGCCCCATGGTCTACGCCATCT...ACTTTGGGAAGCCGCGGCGGGTAGATCACCGGAGGTCAAGAGTTCGAGACCAGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000590121.2 |
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| CDS-3UTR CCA 90 bp | GAACTGCCATTTCTTCACGGCCTGGTCCCGGGCCACCTTGGCACAGATGCTGGCGGTCCCGGGCCACCTTaGCACAGATGCTGGCAGCAC | + |
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Preference number: 4 (lower is better) Translates to: ELPFLHGLVPGHLGTDAGGPGPP*HRCWQH Trigger: GTGCTGCCAGCATCTGTGCCAAGGTGGCCCGGGACC...GCCAGCATCTGTGCCAAGGTGGCCCGGGACCAGGCCGTGAAGAAATGGCAGTTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000646769.1 |
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| CDS-3UTR TCA 90 bp | ATCTTCCGCCTCTTTCTCCAGGATGGTCTGGGCCGTGCGCCAGCTGAACCGGACCTCTCTCCAGCTCGCTaGGATCCATGCCGCCTCAGC | + |
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Preference number: 4 (lower is better) Translates to: IFRLFLQDGLGRAPAEPDLSPAR*DPCRLS Trigger: GCTGAGGCGGCATGGATCTCAGCGAGCTGGAGAGAG...GTCCGGTTCAGCTGGCGCACGGCCCAGACCATCCTGGAGAAAGAGGCGGAAGAT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000646769.1 |
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| CDS-3UTR CCA 90 bp | CTGCCATTTCTTCACGGCCTGGTCCCGGGCCACCTTGGCACAGATGCTGGCAGCTGCTGCAGCCGCGCCTaGTATGTCTCTGGCATCCCT | + |
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Preference number: 4 (lower is better) Translates to: LPFLHGLVPGHLGTDAGSCCSRA*YVSGIP Trigger: AGGGATGCCAGAGACATACCAGGCGCGGCTGCAGCA...GCTGCCAGCATCTGTGCCAAGGTGGCCCGGGACCAGGCCGTGAAGAAATGGCAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000646769.1 |
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| CDS-3UTR TCA 90 bp | GTTCCAAAAGGAAGTAGCTGGACCCGGCTGCAGAGCACACTCCCACCTTGCTTCGGGCCGTGCGCCAGCTaGACCGGACAAACTGGGGGA | + |
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Preference number: 4 (lower is better) Translates to: VPKGSSWTRLQSTLPPCFGPCAS*TGQTGG Trigger: TCCCCCAGTTTGTCCGGTTCAGCTGGCGCACGGCCC...GAAGCAAGGTGGGAGTGTGCTCTGCAGCCGGGTCCAGCTACTTCCTTTTGGAAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000221486.6 |
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| CDS-3UTR CCA 90 bp | TTGGCCTTGACCGTCACCTCAATCCCGGGAAAACTTTGCTGCAGCCGCGCCTGGCCTCTTTCTCCAGGATaGTCTGGGCCGTGCGCCAGC | + |
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Preference number: 4 (lower is better) Translates to: LALTVTSIPGKLCCSRAWPLSPG*SGPCAS Trigger: GCTGGCGCACGGCCCAGACCATCCTGGAGAAAGAGG...CCAGGCGCGGCTGCAGCAAAGTTTTCCCGGGATTGAGGTGACGGTCAAGGCCAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000646769.1 |
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| CDS-3UTR CCA 90 bp | CCACGTGCTCCTTCAACCACGCTTTTGTCTTGGGATCATTGGGGTAGCCTGAGCAGATGGCGTAGACCATaGGGCCCAGCACGGGGCCCC | + |
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Preference number: 4 (lower is better) Translates to: PRAPSTTLLSWDHWGSLSRWRRP*GPARGP Trigger: GGGGCCCCGTGCTGGGCCCCATGGTCTACGCCATCT...GCTCAGGCTACCCCAATGATCCCAAGACAAAAGCGTGGTTGAAGGAGCACGTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000646769.1 |
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| CDS-3UTR CCA 90 bp | ACTGCCATTTCTTCACGGCCTGGTCCCGGGCCACCTTGGCACAGATGCTGGCAGGTGTCCACGAATACCTaGGTGACGTTCACGCCCTGG | + |
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Preference number: 4 (lower is better) Translates to: TAISSRPGPGPPWHRCWQVSTNT*VTFTPW Trigger: CCAGGGCGTGAACGTCACCCAGGTATTCGTGGACAC...CTGCCAGCATCTGTGCCAAGGTGGCCCGGGACCAGGCCGTGAAGAAATGGCAGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000646769.1 |
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| CDS-3UTR CCA 90 bp | GTCTCTGGCATCCCTACGGTGTCCACGAATACCTGGGTGACGTTCACGCCCTGGCATTTCTTCACGGCCTaGTCCCGGGCCACCTTGGCA | + |
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Preference number: 4 (lower is better) Translates to: VSGIPTVSTNTWVTFTPWHFFTA*SRATLA Trigger: TGCCAAGGTGGCCCGGGACCAGGCCGTGAAGAAATG...CCAGGGCGTGAACGTCACCCAGGTATTCGTGGACACCGTAGGGATGCCAGAGAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000646769.1 |
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| CDS-3UTR CCA 90 bp | ACTGCCATTTCTTCACGGCCTGGTCCCGGGCCACCTTGGCACAGATGCTGGCAGCTGAACCGGACAAACTaGGGGAAGCCGAACACAGGC | + |
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Preference number: 4 (lower is better) Translates to: TAISSRPGPGPPWHRCWQLNRTN*GKPNTG Trigger: GCCTGTGTTCGGCTTCCCCCAGTTTGTCCGGTTCAG...CTGCCAGCATCTGTGCCAAGGTGGCCCGGGACCAGGCCGTGAAGAAATGGCAGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000646769.1 |
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| CDS-3UTR TCA 90 bp | CCTGCAGTTTCTCCACGAACTGCCATTTCTTCACGGCCTGGTCCCGGGCCACCTCATCTGCTTTGGCCTTaGCCGTCACCTCAATCCCGG | + |
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Preference number: 4 (lower is better) Translates to: PAVSPRTAISSRPGPGPPHLLWP*PSPQSR Trigger: CCGGGATTGAGGTGACGGTCAAGGCCAAAGCAGATG...AGGTGGCCCGGGACCAGGCCGTGAAGAAATGGCAGTTCGTGGAGAAACTGCAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000646769.1 |
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| CDS-3UTR TCA 90 bp | GCTGGTCTCGAACTCTTGACCTCCGGTGATCTACCCGCCGCGGCTTCCCAAAGTGTTAACTCACCTGGGTaGCGTTCACGCCCTGGTCCA | + |
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Preference number: 4 (lower is better) Translates to: AGLELLTSGDLPAAASQSVNSPG*RSRPGP Trigger: TGGACCAGGGCGTGAACGTCACCCAGGTGAGTTAAC...ACTTTGGGAAGCCGCGGCGGGTAGATCACCGGAGGTCAAGAGTTCGAGACCAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000590121.2 |
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| CDS-3UTR TCA 90 bp | GCTGGTCTCGAACTCTTGACCTCCGGTGATCTACCCGCCGCGGCTTCCCAAAGTCTGGTCTCGAACTCTTaGCCTCCGGTGATCTACCCG | + |
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Preference number: 4 (lower is better) Translates to: AGLELLTSGDLPAAASQSLVSNS*PPVIYP Trigger: CGGGTAGATCACCGGAGGTCAAGAGTTCGAGACCAG...ACTTTGGGAAGCCGCGGCGGGTAGATCACCGGAGGTCAAGAGTTCGAGACCAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000590121.2 |
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| CDS-3UTR GCA 90 bp | TTCTATTTAAGGTTCCAAAAGGAAGTAGCTGGACCCGGCTGCAGAGCACACTCCCCAGCACGGGGCCCCTaGCCGCCTCATCGACGCCCA | + |
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Preference number: 4 (lower is better) Translates to: FYLRFQKEVAGPGCRAHSPARGP*PPHRRP Trigger: TGGGCGTCGATGAGGCGGGCAGGGGCCCCGTGCTGG...GGAGTGTGCTCTGCAGCCGGGTCCAGCTACTTCCTTTTGGAACCTTAAATAGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000221486.6 |
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| CDS-3UTR TCA 90 bp | ACCTCAATCCCGGGAAAACTTTGCTGCAGCCGCGCCTGGTATGTCTCTGGCATCCCACGAATACCTGGGTaGCGTTCACGCCCTGGTCCA | + |
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Preference number: 4 (lower is better) Translates to: TSIPGKLCCSRAWYVSGIPRIPG*RSRPGP Trigger: TGGACCAGGGCGTGAACGTCACCCAGGTATTCGTGG...GATGCCAGAGACATACCAGGCGCGGCTGCAGCAAAGTTTTCCCGGGATTGAGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000646769.1 |
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| CDS-3UTR GCA 90 bp | AAGGTTCCAAAAGGAAGTAGCTGGACCCGGCTGCAGAGCACACTCCCACCTTGCGTAGCTGGACCCGGCTaGAGAGCACACTCCCACCTT | + |
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Preference number: 4 (lower is better) Translates to: KVPKGSSWTRLQSTLPPCVAGPG*RAHSHL Trigger: AAGGTGGGAGTGTGCTCTGCAGCCGGGTCCAGCTAC...GCAAGGTGGGAGTGTGCTCTGCAGCCGGGTCCAGCTACTTCCTTTTGGAACCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000221486.6 |
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| CDS-3UTR CCA 90 bp | TATTTAAGGTTCCAAAAGGAAGTAGCTGGACCCGGCTGCAGAGCACACTCCCACAGATGGCGTAGACCATaGGGCCCAGCACGGGGCCCC | + |
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Preference number: 4 (lower is better) Translates to: YLRFQKEVAGPGCRAHSHRWRRP*GPARGP Trigger: GGGGCCCCGTGCTGGGCCCCATGGTCTACGCCATCT...GTGGGAGTGTGCTCTGCAGCCGGGTCCAGCTACTTCCTTTTGGAACCTTAAATA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000221486.6 |
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| CDS-3UTR CCA 90 bp | TGTCTCTGGCATCCCTACGGTGTCCACGAATACCTGGGTGACGTTCACGCCCTGCGCCTGGTATGTCTCTaGCATCCCTACGGTGTCCAC | + |
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Preference number: 4 (lower is better) Translates to: CLWHPYGVHEYLGDVHALRLVCL*HPYGVH Trigger: GTGGACACCGTAGGGATGCCAGAGACATACCAGGCG...CAGGGCGTGAACGTCACCCAGGTATTCGTGGACACCGTAGGGATGCCAGAGACA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000646769.1 |
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| CDS-3UTR CCA 90 bp | AAGGTTCCAAAAGGAAGTAGCTGGACCCGGCTGCAGAGCACACTCCCACCTTGCTGCTGCAGCCGCGCCTaGTATGTCTCTGGCATCCCT | + |
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Preference number: 4 (lower is better) Translates to: KVPKGSSWTRLQSTLPPCCCSRA*YVSGIP Trigger: AGGGATGCCAGAGACATACCAGGCGCGGCTGCAGCA...GCAAGGTGGGAGTGTGCTCTGCAGCCGGGTCCAGCTACTTCCTTTTGGAACCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000221486.6 |
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| CDS-3UTR TCA 90 bp | CAAAAGGAAGTAGCTGGACCCGGCTGCAGAGCACACTCCCACCTTGCTTCTGTCCATCTGCTTTGGCCTTaGCCGTCACCTCAATCCCGG | + |
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Preference number: 4 (lower is better) Translates to: QKEVAGPGCRAHSHLASVHLLWP*PSPQSR Trigger: CCGGGATTGAGGTGACGGTCAAGGCCAAAGCAGATG...GACAGAAGCAAGGTGGGAGTGTGCTCTGCAGCCGGGTCCAGCTACTTCCTTTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000221486.6 |
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| CDS-3UTR GCA 90 bp | GCTGGTCTCGAACTCTTGACCTCCGGTGATCTACCCGCCGCGGCTTCCCAAAGTTTGCCCGGGTTGGAGTaGAATGGCACAATCTTGGCT | + |
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Preference number: 4 (lower is better) Translates to: AGLELLTSGDLPAAASQSLPGLE*NGTILA Trigger: AGCCAAGATTGTGCCATTGCACTCCAACCCGGGCAA...ACTTTGGGAAGCCGCGGCGGGTAGATCACCGGAGGTCAAGAGTTCGAGACCAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000590121.2 |
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| CDS-3UTR CCA 90 bp | GCTGGTCTCGAACTCTTGACCTCCGGTGATCTACCCGCCGCGGCTTCCCAAAGTGGTAGAGATGAGGTTTaGAGACAGCACATCCAGCGC | + |
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Preference number: 4 (lower is better) Translates to: AGLELLTSGDLPAAASQSGRDEV*RQHIQR Trigger: GCGCTGGATGTGCTGTCTCCAAACCTCATCTCTACC...ACTTTGGGAAGCCGCGGCGGGTAGATCACCGGAGGTCAAGAGTTCGAGACCAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000590121.2 |
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| 3UTR CAA 72 bp | TTTGGCCTTGACCGTCACCTCAATCCCGGGAAAACTTaGCTGCAGCCGCGCCTGGTATGTCTCTGGCATCCC | + |
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Preference number: 4 (lower is better) Translates to: FGLDRHLNPGKT*LQPRLVCLWHP Trigger: GGGATGCCAGAGACATACCAGGCGCGGCTGCAGCAAAGTTTTCCCGGGATTGAGGTGACGGTCAAGGCCAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000646769.1 |
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| CDS-3UTR CCA 90 bp | CCATTCTATTTAAGGTTCCAAAAGGAAGTAGCTGGACCCGGCTGCAGAGCACACGGTCCCGGGCCACCTTaGCACAGATGCTGGCAGCAC | + |
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Preference number: 4 (lower is better) Translates to: PFYLRFQKEVAGPGCRAHGPGPP*HRCWQH Trigger: GTGCTGCCAGCATCTGTGCCAAGGTGGCCCGGGACC...GTGTGCTCTGCAGCCGGGTCCAGCTACTTCCTTTTGGAACCTTAAATAGAATGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000221486.6 |
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| CDS-3UTR CCA 90 bp | TTGGCCTTGACCGTCACCTCAATCCCGGGAAAACTTTGCTGCAGCCGCGCCTGGACCACGCTTTTGTCTTaGGATCATTGGGGTAGCCTG | + |
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Preference number: 4 (lower is better) Translates to: LALTVTSIPGKLCCSRAWTTLLS*DHWGSL Trigger: CAGGCTACCCCAATGATCCCAAGACAAAAGCGTGGT...CCAGGCGCGGCTGCAGCAAAGTTTTCCCGGGATTGAGGTGACGGTCAAGGCCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000646769.1 |
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| CDS-3UTR CCA 90 bp | CGTGCTCCTTCAACCACGCTTTTGTCTTGGGATCATTGGGGTAGCCTGAGCCATTTCTCCAGGATGGTCTaGGCCGTGCGCCAGCTGAAC | + |
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Preference number: 4 (lower is better) Translates to: RAPSTTLLSWDHWGSLSHFSRMV*AVRQLN Trigger: GTTCAGCTGGCGCACGGCCCAGACCATCCTGGAGAA...ATGGCTCAGGCTACCCCAATGATCCCAAGACAAAAGCGTGGTTGAAGGAGCACG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000646769.1 |
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| CDS-3UTR CCA 90 bp | GTTCCAAAAGGAAGTAGCTGGACCCGGCTGCAGAGCACACTCCCACCTTGCTTCTCCAGGAAATATCGGTaGGAAGAACGGGGACGGGCT | + |
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Preference number: 4 (lower is better) Translates to: VPKGSSWTRLQSTLPPCFSRKYR*EERGRA Trigger: AGCCCGTCCCCGTTCTTCCCACCGATATTTCCTGGA...GAAGCAAGGTGGGAGTGTGCTCTGCAGCCGGGTCCAGCTACTTCCTTTTGGAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000221486.6 |
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| CDS-3UTR TCA 90 bp | CCCATTCTATTTAAGGTTCCAAAAGGAAGTAGCTGGACCCGGCTGCAGAGCACACTCTCTCCAGCTCGCTaGGATCCATGCCGCCTCAGC | + |
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Preference number: 4 (lower is better) Translates to: PILFKVPKGSSWTRLQSTLSPAR*DPCRLS Trigger: GCTGAGGCGGCATGGATCTCAGCGAGCTGGAGAGAG...TGTGCTCTGCAGCCGGGTCCAGCTACTTCCTTTTGGAACCTTAAATAGAATGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000221486.6 |
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| CDS-3UTR TCA 90 bp | GCTGGTCTCGAACTCTTGACCTCCGGTGATCTACCCGCCGCGGCTTCCCAAAGTAGTGGCTGTATCATGTaGCAGGGAGTTCAGGTTGTA | + |
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Preference number: 4 (lower is better) Translates to: AGLELLTSGDLPAAASQSSGCIM*QGVQVV Trigger: TACAACCTGAACTCCCTGTCACATGATACAGCCACT...ACTTTGGGAAGCCGCGGCGGGTAGATCACCGGAGGTCAAGAGTTCGAGACCAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000590121.2 |
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| CDS-3UTR CCA 90 bp | CCATTCTATTTAAGGTTCCAAAAGGAAGTAGCTGGACCCGGCTGCAGAGCACACGCAGCTGCTAGAGGCTaGTTGCTGACTCCAGGCCGC | + |
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Preference number: 4 (lower is better) Translates to: PFYLRFQKEVAGPGCRAHAAARG*LLTPGR Trigger: GCGGCCTGGAGTCAGCAACCAGCCTCTAGCAGCTGC...GTGTGCTCTGCAGCCGGGTCCAGCTACTTCCTTTTGGAACCTTAAATAGAATGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000221486.6 |
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| CDS-3UTR TCA 90 bp | CCATTCTATTTAAGGTTCCAAAAGGAAGTAGCTGGACCCGGCTGCAGAGCACACCCACGAATACCTGGGTaGCGTTCACGCCCTGGTCCA | + |
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Preference number: 4 (lower is better) Translates to: PFYLRFQKEVAGPGCRAHPRIPG*RSRPGP Trigger: TGGACCAGGGCGTGAACGTCACCCAGGTATTCGTGG...GTGTGCTCTGCAGCCGGGTCCAGCTACTTCCTTTTGGAACCTTAAATAGAATGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000221486.6 |
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| CDS-3UTR CCA 90 bp | TGTCTCTGGCATCCCTACGGTGTCCACGAATACCTGGGTGACGTTCACGCCCTGGTGACGTTCACGCCCTaGTCCAATGCATACTGTATA | + |
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Preference number: 4 (lower is better) Translates to: CLWHPYGVHEYLGDVHALVTFTP*SNAYCI Trigger: TATACAGTATGCATTGGACCAGGGCGTGAACGTCAC...CAGGGCGTGAACGTCACCCAGGTATTCGTGGACACCGTAGGGATGCCAGAGACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000646769.1 |
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| CDS-3UTR CCA 90 bp | CAAAAGGAAGTAGCTGGACCCGGCTGCAGAGCACACTCCCACCTTGCTTCTGTCACCACGCTTTTGTCTTaGGATCATTGGGGTAGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: QKEVAGPGCRAHSHLASVTTLLS*DHWGSL Trigger: CAGGCTACCCCAATGATCCCAAGACAAAAGCGTGGT...GACAGAAGCAAGGTGGGAGTGTGCTCTGCAGCCGGGTCCAGCTACTTCCTTTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000221486.6 |
||
| CDS-3UTR CCA 90 bp | CCATTCTATTTAAGGTTCCAAAAGGAAGTAGCTGGACCCGGCTGCAGAGCACACTTCTCCAGGATGGTCTaGGCCGTGCGCCAGCTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: PFYLRFQKEVAGPGCRAHFSRMV*AVRQLN Trigger: GTTCAGCTGGCGCACGGCCCAGACCATCCTGGAGAA...GTGTGCTCTGCAGCCGGGTCCAGCTACTTCCTTTTGGAACCTTAAATAGAATGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000221486.6 |
||
| CDS-3UTR TCA 90 bp | CCAAAAGGAAGTAGCTGGACCCGGCTGCAGAGCACACTCCCACCTTGCTTCTGTAGTGGCTGTATCATGTaGCAGGGAGTTCAGGTTGTA | + |
|
Preference number: 4 (lower is better) Translates to: PKGSSWTRLQSTLPPCFCSGCIM*QGVQVV Trigger: TACAACCTGAACTCCCTGTCACATGATACAGCCACT...ACAGAAGCAAGGTGGGAGTGTGCTCTGCAGCCGGGTCCAGCTACTTCCTTTTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000221486.6 |
||
| CDS-3UTR TCA 90 bp | GCCTGGTATGTCTCTGGCATCCCTACGGTGTCCACGAATACCTGGGTGACGTTCAGTGGCTGTATCATGTaGCAGGGAGTTCAGGTTGTA | + |
|
Preference number: 4 (lower is better) Translates to: AWYVSGIPTVSTNTWVTFSGCIM*QGVQVV Trigger: TACAACCTGAACTCCCTGTCACATGATACAGCCACT...GAACGTCACCCAGGTATTCGTGGACACCGTAGGGATGCCAGAGACATACCAGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000646769.1 |
||
| CDS-3UTR CCA 90 bp | CCATTCTATTTAAGGTTCCAAAAGGAAGTAGCTGGACCCGGCTGCAGAGCACACCTGAACCGGACAAACTaGGGGAAGCCGAACACAGGC | + |
|
Preference number: 4 (lower is better) Translates to: PFYLRFQKEVAGPGCRAHLNRTN*GKPNTG Trigger: GCCTGTGTTCGGCTTCCCCCAGTTTGTCCGGTTCAG...GTGTGCTCTGCAGCCGGGTCCAGCTACTTCCTTTTGGAACCTTAAATAGAATGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000221486.6 |
||
| CDS-3UTR CCA 90 bp | CCATTCTATTTAAGGTTCCAAAAGGAAGTAGCTGGACCCGGCTGCAGAGCACACGAACGGGGACGGGCTTaGGACCCTTCATTGAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: PFYLRFQKEVAGPGCRAHERGRA*DPSLRK Trigger: CTTCCTCAATGAAGGGTCCCAAGCCCGTCCCCGTTC...GTGTGCTCTGCAGCCGGGTCCAGCTACTTCCTTTTGGAACCTTAAATAGAATGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000221486.6 |
||
| 3UTR CAA 72 bp | CGAACACAGGCTCCACGTGCTCCTTCAACCACGCTTTaGTCTTGGGATCATTGGGGTAGCCTGAGCCATAAT | + |
|
Preference number: 4 (lower is better) Translates to: RTQAPRAPSTTL*SWDHWGSLSHN Trigger: ATTATGGCTCAGGCTACCCCAATGATCCCAAGACAAAAGCGTGGTTGAAGGAGCACGTGGAGCCTGTGTTCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000646769.1 |
||
| CDS-3UTR TCA 90 bp | TTCTCCTTAAACAATTTTAATGTCTGGGTTGGGGAAGCAGGTAGAGCGCGTAGACTAGAGGCTGGTTGCTaGCTCCAGGCCGCGTTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: FSLNNFNVWVGEAGRARRLEAGC*LQAAFQ Trigger: CTGGAACGCGGCCTGGAGTCAGCAACCAGCCTCTAG...TCTACGCGCTCTACCTGCTTCCCCAACCCAGACATTAAAATTGTTTAAGGAGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000221486.6 |
||
| CDS-3UTR TCA 90 bp | CTGTGGCATGATCATGGCTCACTGCAGTCTCGAACTCCTGTTTTGTCCCCATTTTGGAGTGCTGTGGCATaGTCATGGCTCACTGCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: LWHDHGSLQSRTPVLSPFWSAVA*SWLTAV Trigger: GACTGCAGTGAGCCATGATCATGCCACAGCACTCCA...AAATGGGGACAAAACAGGAGTTCGAGACTGCAGTGAGCCATGATCATGCCACAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000590121.2 |
||
| CDS-3UTR TCA 90 bp | CTGTGGCATGATCATGGCTCACTGCAGTCTCGAACTCCTGTTTTGTCCCCATTTCCTGTCTCAGCCTCCTaGGTAGCTAGGATTACAGGC | + |
|
Preference number: 4 (lower is better) Translates to: LWHDHGSLQSRTPVLSPFPVSAS*VARITG Trigger: GCCTGTAATCCTAGCTACTCAGGAGGCTGAGACAGG...AAATGGGGACAAAACAGGAGTTCGAGACTGCAGTGAGCCATGATCATGCCACAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000590121.2 |
||
| CDS-3UTR CCA 90 bp | CAAAAGGAAGTAGCTGGACCCGGCTGCAGAGCACACTCCCACCTTGCTTCTGTCTTGTCTTGGGATCATTaGGGTAGCCTGAGCCATAAT | + |
|
Preference number: 4 (lower is better) Translates to: QKEVAGPGCRAHSHLASVLSWDH*GSLSHN Trigger: ATTATGGCTCAGGCTACCCCAATGATCCCAAGACAA...GACAGAAGCAAGGTGGGAGTGTGCTCTGCAGCCGGGTCCAGCTACTTCCTTTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000221486.6 |
||
| CDS-3UTR CCA 90 bp | TATGTCTCTGGCATCCCTACGGTGTCCACGAATACCTGGGTGACGTTCACGCCCTTGTCTTGGGATCATTaGGGTAGCCTGAGCCATAAT | + |
|
Preference number: 4 (lower is better) Translates to: YVSGIPTVSTNTWVTFTPLSWDH*GSLSHN Trigger: ATTATGGCTCAGGCTACCCCAATGATCCCAAGACAA...GGGCGTGAACGTCACCCAGGTATTCGTGGACACCGTAGGGATGCCAGAGACATA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000646769.1 |
||
| CDS-3UTR CCA 90 bp | TTCTCCTTAAACAATTTTAATGTCTGGGTTGGGGAAGCAGGTAGAGCGCGTAGACCTCTTTCTCCAGGATaGTCTGGGCCGTGCGCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: FSLNNFNVWVGEAGRARRPLSPG*SGPCAS Trigger: GCTGGCGCACGGCCCAGACCATCCTGGAGAAAGAGG...TCTACGCGCTCTACCTGCTTCCCCAACCCAGACATTAAAATTGTTTAAGGAGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000221486.6 |
||
| CDS-3UTR TCA 90 bp | TACCTGGGTGACGTTCACGCCCTGGTCCAATGCATACTGTATAAGCCCAGTGGCATCATTGGGGTAGCCTaGGCCATAATCAGTATCCAA | + |
|
Preference number: 4 (lower is better) Translates to: YLGDVHALVQCILYKPSGIIGVA*AIISIQ Trigger: TTGGATACTGATTATGGCTCAGGCTACCCCAATGAT...GCCACTGGGCTTATACAGTATGCATTGGACCAGGGCGTGAACGTCACCCAGGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000646769.1 |
||
| CDS-3UTR GCA 90 bp | CTGTGGCATGATCATGGCTCACTGCAGTCTCGAACTCCTGTTTTGTCCCCATTTTCACCCAGGATGGAGTaGTGTGGCATGATCATGGCT | + |
|
Preference number: 4 (lower is better) Translates to: LWHDHGSLQSRTPVLSPFSPRME*CGMIMA Trigger: AGCCATGATCATGCCACAGCACTCCATCCTGGGTGA...AAATGGGGACAAAACAGGAGTTCGAGACTGCAGTGAGCCATGATCATGCCACAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000590121.2 |
||
| CDS-3UTR CCA 90 bp | TTCTCCTTAAACAATTTTAATGTCTGGGTTGGGGAAGCAGGTAGAGCGCGTAGACATTTCTTCACGGCCTaGTCCCGGGCCACCTTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: FSLNNFNVWVGEAGRARRHFFTA*SRATLA Trigger: TGCCAAGGTGGCCCGGGACCAGGCCGTGAAGAAATG...TCTACGCGCTCTACCTGCTTCCCCAACCCAGACATTAAAATTGTTTAAGGAGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000221486.6 |
||
| CDS-3UTR CCA 90 bp | TTCTCCTTAAACAATTTTAATGTCTGGGTTGGGGAAGCAGGTAGAGCGCGTAGACGCCTGGTATGTCTCTaGCATCCCTACGGTGTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: FSLNNFNVWVGEAGRARRRLVCL*HPYGVH Trigger: GTGGACACCGTAGGGATGCCAGAGACATACCAGGCG...TCTACGCGCTCTACCTGCTTCCCCAACCCAGACATTAAAATTGTTTAAGGAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000221486.6 |
||
| CDS-3UTR CCA 90 bp | CTGTGGCATGATCATGGCTCACTGCAGTCTCGAACTCCTGTTTTGTCCCCATTTCCTCCATTTTTGAGTTaGGGGGCTTCCTTTGTCACC | + |
|
Preference number: 4 (lower is better) Translates to: LWHDHGSLQSRTPVLSPFPPFLS*GASFVT Trigger: GGTGACAAAGGAAGCCCCCCAACTCAAAAATGGAGG...AAATGGGGACAAAACAGGAGTTCGAGACTGCAGTGAGCCATGATCATGCCACAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000590121.2 |
||
| CDS-3UTR CCA 90 bp | CACCTTGCTTCTGTCCCAAAAGTACATCCCCTACGTGTGGTTCTCCTTAAACAAGGTAGAGATGAGGTTTaGAGACAGCACATCCAGCGC | + |
|
Preference number: 4 (lower is better) Translates to: HLASVPKVHPLRVVLLKQGRDEV*RQHIQR Trigger: GCGCTGGATGTGCTGTCTCCAAACCTCATCTCTACC...TTGTTTAAGGAGAACCACACGTAGGGGATGTACTTTTGGGACAGAAGCAAGGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000221486.6 |
||
| CDS-3UTR CCA 90 bp | CTGTGGCATGATCATGGCTCACTGCAGTCTCGAACTCCTGTTTTGTCCCCATTTGTGACGTTCACGCCCTaGTCCAATGCATACTGTATA | + |
|
Preference number: 4 (lower is better) Translates to: LWHDHGSLQSRTPVLSPFVTFTP*SNAYCI Trigger: TATACAGTATGCATTGGACCAGGGCGTGAACGTCAC...AAATGGGGACAAAACAGGAGTTCGAGACTGCAGTGAGCCATGATCATGCCACAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000590121.2 |
||
| CDS-3UTR CCA 90 bp | TTCTCCTTAAACAATTTTAATGTCTGGGTTGGGGAAGCAGGTAGAGCGCGTAGACCAAAAGGAAGTAGCTaGACCCGGCTGCAGAGCACA | + |
|
Preference number: 4 (lower is better) Translates to: FSLNNFNVWVGEAGRARRPKGSS*TRLQST Trigger: TGTGCTCTGCAGCCGGGTCCAGCTACTTCCTTTTGG...TCTACGCGCTCTACCTGCTTCCCCAACCCAGACATTAAAATTGTTTAAGGAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000221486.6 |
||
| CDS-3UTR CCA 90 bp | TTGCTTCTGTCCCAAAAGTACATCCCCTACGTGTGGTTCTCCTTAAACAATTTTGTGTCCACGAATACCTaGGTGACGTTCACGCCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: LLLSQKYIPYVWFSLNNFVSTNT*VTFTPW Trigger: CCAGGGCGTGAACGTCACCCAGGTATTCGTGGACAC...AAAATTGTTTAAGGAGAACCACACGTAGGGGATGTACTTTTGGGACAGAAGCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000221486.6 |
||
| CDS-3UTR CCA 90 bp | CTGTGGCATGATCATGGCTCACTGCAGTCTCGAACTCCTGTTTTGTCCCCATTTCCTGAGATGACCAAATaGGGACAACTTACAGTTAAC | + |
|
Preference number: 4 (lower is better) Translates to: LWHDHGSLQSRTPVLSPFPEMTK*GQLTVN Trigger: GTTAACTGTAAGTTGTCCCCATTTGGTCATCTCAGG...AAATGGGGACAAAACAGGAGTTCGAGACTGCAGTGAGCCATGATCATGCCACAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000590121.2 |
||
| CDS-3UTR CCA 90 bp | CCCATTCTATTTAAGGTTCCAAAAGGAAGTAGCTGGACCCGGCTGCAGAGCACAAACAATTTTAATGTCTaGGTTGGGGAAGCAGGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: PILFKVPKGSSWTRLQSTNNFNV*VGEAGR Trigger: TCTACCTGCTTCCCCAACCCAGACATTAAAATTGTT...TGTGCTCTGCAGCCGGGTCCAGCTACTTCCTTTTGGAACCTTAAATAGAATGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000221486.6 |
||
| CDS-3UTR TCA 90 bp | TTCTCCTTAAACAATTTTAATGTCTGGGTTGGGGAAGCAGGTAGAGCGCGTAGAATCATTGGGGTAGCCTaGGCCATAATCAGTATCCAA | + |
|
Preference number: 4 (lower is better) Translates to: FSLNNFNVWVGEAGRARRIIGVA*AIISIQ Trigger: TTGGATACTGATTATGGCTCAGGCTACCCCAATGAT...TCTACGCGCTCTACCTGCTTCCCCAACCCAGACATTAAAATTGTTTAAGGAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000221486.6 |
||
| CDS-3UTR TCA 90 bp | TTGCTTCTGTCCCAAAAGTACATCCCCTACGTGTGGTTCTCCTTAAACAATTTTCTGATTCTCGGATGCTaGGTCCTCCCATATAACATC | + |
|
Preference number: 4 (lower is better) Translates to: LLLSQKYIPYVWFSLNNFLILGC*VLPYNI Trigger: GATGTTATATGGGAGGACTCAGCATCCGAGAATCAG...AAAATTGTTTAAGGAGAACCACACGTAGGGGATGTACTTTTGGGACAGAAGCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000221486.6 |
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| CDS-3UTR CCA 90 bp | TTGCTTCTGTCCCAAAAGTACATCCCCTACGTGTGGTTCTCCTTAAACAATTTTGTGACGTTCACGCCCTaGTCCAATGCATACTGTATA | + |
|
Preference number: 4 (lower is better) Translates to: LLLSQKYIPYVWFSLNNFVTFTP*SNAYCI Trigger: TATACAGTATGCATTGGACCAGGGCGTGAACGTCAC...AAAATTGTTTAAGGAGAACCACACGTAGGGGATGTACTTTTGGGACAGAAGCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000221486.6 |
||
| CDS-3UTR CCA 90 bp | TTCTCCTTAAACAATTTTAATGTCTGGGTTGGGGAAGCAGGTAGAGCGCGTAGATACATCCCCTACGTGTaGTTCTCCTTAAACAATTTT | + |
|
Preference number: 4 (lower is better) Translates to: FSLNNFNVWVGEAGRARRYIPYV*FSLNNF Trigger: AAAATTGTTTAAGGAGAACCACACGTAGGGGATGTA...TCTACGCGCTCTACCTGCTTCCCCAACCCAGACATTAAAATTGTTTAAGGAGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000221486.6 |
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| CDS GCA 90 bp | CGGGGCCCCTGCCCGCCTCATCGACGCCCAGGACGCAAGGCTCCTTaGGGCACACCGCGGGCACAGGCGAACTCAGGCGACAGCGGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: RGPCPPHRRPGRKAP*GTPRAQANSGDSGL Trigger: CAGGCCGCTGTCGCCTGAGTTCGCCTGTGCCCGCGGTGTGCCGCAAGGAGCCTTGCGTCCTGGGCGTCGATGAGGCGGGCAGGGGCCCCG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000221486.6 ENST00000590121.2 ENST00000590279.2 ENST00000593017.2 ENST00000646769.1 |
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| CDS GCA 90 bp | ACATACCCAGGAATCCCTTCCCCAGACGCACACCTCGGGCTCACCTaGCACTTTCAGCGCCTCCAGATCTGCCAGGCGAGGCAGGGGACA | + |
|
Preference number: 5 (lower is better) Translates to: TYPGIPSPDAHLGLT*HFQRLQICQARQGT Trigger: TGTCCCCTGCCTCGCCTGGCAGATCTGGAGGCGCTGAAAGTGGCAGGTGAGCCCGAGGTGTGCGTCTGGGGAAGGGATTCCTGGGTATGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000590279.2 |
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| CDS CCA 90 bp | CCCGGGGACCCCTCACCGCCCAAGCATGCTGGTAGAGATGAGGTTTaGAGACAGCACATCCAGCGCCCAGCCGACAAAGTCCGTGTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: PGDPSPPKHAGRDEV*RQHIQRPADKVRVL Trigger: GAGGACACGGACTTTGTCGGCTGGGCGCTGGATGTGCTGTCTCCAAACCTCATCTCTACCAGCATGCTTGGGCGGTGAGGGGTCCCCGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000593017.2 |
||
| CDS GCA 90 bp | TCTTTAGGTGCCATCACCACGACCACATCCCCTCCCTTGGTGCAGTaGAATCCCGACTCCCGTTTCCCGCATCCTCCGTACCACGCCCCT | + |
|
Preference number: 5 (lower is better) Translates to: SLGAITTTTSPPLVQ*NPDSRFPHPPYHAP Trigger: AGGGGCGTGGTACGGAGGATGCGGGAAACGGGAGTCGGGATTGCACTGCACCAAGGGAGGGGATGTGGTCGTGGTGATGGCACCTAAAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000590279.2 ENST00000593017.2 |
||
| CDS-3UTR CAA 90 bp | GCCGTGCGCCAGCTGAACCGGACAAACTGGGGGAAGCCGAACACAGGCTCCACGGAGTTCAGGTTGTATTaGACCCTGCCACTTTCAGCG | + |
|
Preference number: 5 (lower is better) Translates to: AVRQLNRTNWGKPNTGSTEFRLY*TLPLSA Trigger: CGCTGAAAGTGGCAGGGTCAAATACAACCTGAACTC...CGTGGAGCCTGTGTTCGGCTTCCCCCAGTTTGTCCGGTTCAGCTGGCGCACGGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000646769.1 |
||
| CDS CCA 90 bp | GGGTCTTTGAGTCTGGGAGGAGGTTTGGAAGAGAAGGGGAACAGCTaGTTCTCCCAGTTCCTGCCCTCCCCTTTCAGTTCTCACCTGCCC | + |
|
Preference number: 5 (lower is better) Translates to: GSLSLGGGLEEKGNS*FSQFLPSPFSSHLP Trigger: GGGCAGGTGAGAACTGAAAGGGGAGGGCAGGAACTGGGAGAACCAGCTGTTCCCCTTCTCTTCCAAACCTCCTCCCAGACTCAAAGACCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000590279.2 |
||
| CDS-3UTR CAA 90 bp | TCAATCCCGGGAAAACTTTGCTGCAGCCGCGCCTGGTATGTCTCTGGCATCCCTGACAGGGAGTTCAGGTaGTATTTGACCCTGCCACTT | + |
|
Preference number: 5 (lower is better) Translates to: SIPGKLCCSRAWYVSGIPDREFR*YLTLPL Trigger: AAGTGGCAGGGTCAAATACAACCTGAACTCCCTGTC...AGGGATGCCAGAGACATACCAGGCGCGGCTGCAGCAAAGTTTTCCCGGGATTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000646769.1 |
||
| CDS TCA 90 bp | GCCCTGGTCCAATGCATACTGTATAAGCCCAGTGGCTGTATCATGTaGCAGGGAGTTCAGGTTGTATTTGACCCTGCCACTTTCAGCGCC | + |
|
Preference number: 5 (lower is better) Translates to: ALVQCILYKPSGCIM*QGVQVVFDPATFSA Trigger: GGCGCTGAAAGTGGCAGGGTCAAATACAACCTGAACTCCCTGTCACATGATACAGCCACTGGGCTTATACAGTATGCATTGGACCAGGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000646769.1 |
||
| CDS TCA 90 bp | GCCCTGGTCCAATGCATACTGTATAAGCCCAGTGGCTGTATCATGTaGCAGGGAGTTCAGGTTGTATTTGACCCTGTGGTGGGGAACAGA | + |
|
Preference number: 5 (lower is better) Translates to: ALVQCILYKPSGCIM*QGVQVVFDPVVGNR Trigger: TCTGTTCCCCACCACAGGGTCAAATACAACCTGAACTCCCTGTCACATGATACAGCCACTGGGCTTATACAGTATGCATTGGACCAGGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000593017.2 |
||
| CDS GCA 90 bp | GAAAGTTGCCATTCATCCCTGTTCTATCATCACTGCTTCTTTAGGTaGCATCACCACGACCACATCCCCTCCCTTGGTGCAGTGCAATCC | + |
|
Preference number: 5 (lower is better) Translates to: ESCHSSLFYHHCFFR*HHHDHIPSLGAVQS Trigger: GGATTGCACTGCACCAAGGGAGGGGATGTGGTCGTGGTGATGGCACCTAAAGAAGCAGTGATGATAGAACAGGGATGAATGGCAACTTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000590279.2 ENST00000593017.2 ENST00000643757.1 |
||
| CDS CAA 90 bp | ACGGGGCCCCTGCCCGCCTCATCGACGCCCAGGACGCAAGGCTCCTaGCGGCACACCGCGGGCACAGGCGAACTCAGGCGACAGCGGCCT | + |
|
Preference number: 6 (lower is better) Translates to: TGPLPASSTPRTQGS*RHTAGTGELRRQRP Trigger: AGGCCGCTGTCGCCTGAGTTCGCCTGTGCCCGCGGTGTGCCGCAAGGAGCCTTGCGTCCTGGGCGTCGATGAGGCGGGCAGGGGCCCCGT 73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000221486.6 ENST00000590121.2 ENST00000590279.2 ENST00000593017.2 ENST00000646769.1 |
||
| CDS GCA 72 bp | TGCCCGCCTCATCGACGCCCAGGACGCAAGGCTCCTTaGGGCACACCGCGGGCACAGGCGAACTCAGGCGAC | + |
|
Preference number: 6 (lower is better) Translates to: CPPHRRPGRKAP*GTPRAQANSGD Trigger: GTCGCCTGAGTTCGCCTGTGCCCGCGGTGTGCCGCAAGGAGCCTTGCGTCCTGGGCGTCGATGAGGCGGGCA 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000221486.6 ENST00000590121.2 ENST00000590279.2 ENST00000593017.2 ENST00000646769.1 |
||
| CDS CAA 72 bp | CTGCCCGCCTCATCGACGCCCAGGACGCAAGGCTCCTaGCGGCACACCGCGGGCACAGGCGAACTCAGGCGA | + |
|
Preference number: 6 (lower is better) Translates to: LPASSTPRTQGS*RHTAGTGELRR Trigger: TCGCCTGAGTTCGCCTGTGCCCGCGGTGTGCCGCAAGGAGCCTTGCGTCCTGGGCGTCGATGAGGCGGGCAG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000221486.6 ENST00000590121.2 ENST00000590279.2 ENST00000593017.2 ENST00000646769.1 |
||
| CDS GCA 72 bp | GGAATCCCTTCCCCAGACGCACACCTCGGGCTCACCTaGCACTTTCAGCGCCTCCAGATCTGCCAGGCGAGG | + |
|
Preference number: 6 (lower is better) Translates to: GIPSPDAHLGLT*HFQRLQICQAR Trigger: CCTCGCCTGGCAGATCTGGAGGCGCTGAAAGTGGCAGGTGAGCCCGAGGTGTGCGTCTGGGGAAGGGATTCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000590279.2 |
||
| CDS GCA 72 bp | CATTCTAGGAACAAAGCTTGGTCAGCCCATGCTGGCTaGCCCTCCCGGGGACCCCTCACCGCCCAAGCATGC | + |
|
Preference number: 6 (lower is better) Translates to: HSRNKAWSAHAG*PSRGPLTAQAC Trigger: GCATGCTTGGGCGGTGAGGGGTCCCCGGGAGGGGCAGCCAGCATGGGCTGACCAAGCTTTGTTCCTAGAATG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000593017.2 |
||
| CDS CAA 72 bp | GCGGGCACAGGCGAACTCAGGCGACAGCGGCCTGTATaGTCTCTCTCCAGCTCGCTGAGATCCATGCCGCCT | + |
|
Preference number: 6 (lower is better) Translates to: AGTGELRRQRPV*SLSSSLRSMPP Trigger: AGGCGGCATGGATCTCAGCGAGCTGGAGAGAGACAATACAGGCCGCTGTCGCCTGAGTTCGCCTGTGCCCGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000221486.6 ENST00000590279.2 ENST00000646769.1 |
||
| CDS CCA 72 bp | CCCTCACCGCCCAAGCATGCTGGTAGAGATGAGGTTTaGAGACAGCACATCCAGCGCCCAGCCGACAAAGTC | + |
|
Preference number: 6 (lower is better) Translates to: PSPPKHAGRDEV*RQHIQRPADKV Trigger: GACTTTGTCGGCTGGGCGCTGGATGTGCTGTCTCCAAACCTCATCTCTACCAGCATGCTTGGGCGGTGAGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000593017.2 |
||
| CDS CAA 90 bp | TTTCCCGCTCGCTCTCCAATAGGGTCTTTGAGTCTGGGAGGAGGTTaGGAAGAGAAGGGGAACAGCTGGTTCTCCCAGTTCCTGCCCTCC | + |
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Preference number: 6 (lower is better) Translates to: FPARSPIGSLSLGGG*EEKGNSWFSQFLPS Trigger: GGAGGGCAGGAACTGGGAGAACCAGCTGTTCCCCTTCTCTTCCAAACCTCCTCCCAGACTCAAAGACCCTATTGGAGAGCGAGCGGGAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000590279.2 |
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| CDS CAA 72 bp | AGCCCAGTGGCTGTATCATGTGACAGGGAGTTCAGGTaGTATTTGACCCTGTGGTGGGGAACAGAGCCCAGT | + |
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Preference number: 6 (lower is better) Translates to: SPVAVSCDREFR*YLTLWWGTEPS Trigger: ACTGGGCTCTGTTCCCCACCACAGGGTCAAATACAACCTGAACTCCCTGTCACATGATACAGCCACTGGGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000593017.2 |
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| CDS CAA 72 bp | CGCTCTCCAATAGGGTCTTTGAGTCTGGGAGGAGGTTaGGAAGAGAAGGGGAACAGCTGGTTCTCCCAGTTC | + |
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Preference number: 6 (lower is better) Translates to: RSPIGSLSLGGG*EEKGNSWFSQF Trigger: GAACTGGGAGAACCAGCTGTTCCCCTTCTCTTCCAAACCTCCTCCCAGACTCAAAGACCCTATTGGAGAGCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000590279.2 |
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| CDS TCA 72 bp | AGTTTTCTGGCAGCCGGGGTCCAATCACTGAGCCCGTaGAAGTTGCCATTCATCCCTGTTCTATCATCACTG | + |
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Preference number: 6 (lower is better) Translates to: SFLAAGVQSLSP*KLPFIPVLSSL Trigger: CAGTGATGATAGAACAGGGATGAATGGCAACTTTCACGGGCTCAGTGATTGGACCCCGGCTGCCAGAAAACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000590279.2 ENST00000593017.2 ENST00000643757.1 |
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| CDS GCA 72 bp | CATTCATCCCTGTTCTATCATCACTGCTTCTTTAGGTaGCATCACCACGACCACATCCCCTCCCTTGGTGCA | + |
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Preference number: 6 (lower is better) Translates to: HSSLFYHHCFFR*HHHDHIPSLGA Trigger: TGCACCAAGGGAGGGGATGTGGTCGTGGTGATGGCACCTAAAGAAGCAGTGATGATAGAACAGGGATGAATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000590279.2 ENST00000593017.2 ENST00000643757.1 |
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| CDS TCA 72 bp | TGGCTGTATCATGTGACAGGGAGTTCAGGTTGTATTTaGCCCTGTGGTGGGGAACAGAGCCCAGTTAATCTC | + |
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Preference number: 6 (lower is better) Translates to: WLYHVTGSSGCI*PCGGEQSPVNL Trigger: GAGATTAACTGGGCTCTGTTCCCCACCACAGGGTCAAATACAACCTGAACTCCCTGTCACATGATACAGCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000593017.2 |
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