RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RNASE9 (Homo sapiens)

Ensembl gene IDs: ENSG00000188655

Ensembl transcript IDs: ENST00000338904.7, ENST00000404716.7, ENST00000429244.6, ENST00000553541.5, ENST00000553706.5, ENST00000554964.5, ENST00000555230.5, ENST00000556208.5, ENST00000557068.5, ENST00000557209.1, ENST00000611135.1

Found 345 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR TCA 90 bp CAGGCAACCATTTCCTTTTCCTCTTGGTGCTGGTCATCCTTCCACTGCAGGCATCTTAGGGGACCTGCATaGGACCACATCTCAGAGCAC +
Preference number: 2 (lower is better)
Translates to: QATISFSSWCWSSFHCRHLRGPA*DHISEH
Trigger: GTGCTCTGAGATGTGGTCTCATGCAGGTCCCCTAAG...ATGCCTGCAGTGGAAGGATGACCAGCACCAAGAGGAAAAGGAAATGGTTGCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000338904.7
ENST00000404716.7
ENST00000429244.6
ENST00000553541.5
ENST00000553706.5
ENST00000554964.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
ENST00000611135.1
3UTR-3UTR TCA 90 bp GCTGGTCATCCTTCCACTGCAGGCATCTGTATCCGTAACACATTCAAGGCATGCCTTAGGGGACCTGCATaGGACCACATCTCAGAGCAC +
Preference number: 2 (lower is better)
Translates to: AGHPSTAGICIRNTFKACLRGPA*DHISEH
Trigger: GTGCTCTGAGATGTGGTCTCATGCAGGTCCCCTAAG...GCATGCCTTGAATGTGTTACGGATACAGATGCCTGCAGTGGAAGGATGACCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000338904.7
ENST00000404716.7
ENST00000429244.6
ENST00000553541.5
ENST00000553706.5
ENST00000554964.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
ENST00000611135.1
3UTR-3UTR TCA 90 bp TCAGGCAACCATTTCCTTTTCCTCTTGGTGCTGGTCATCCTTCCACTGCAGGCACTTAGGGGACCTGCATaGGACCACATCTCAGAGCAC +
Preference number: 2 (lower is better)
Translates to: SGNHFLFLLVLVILPLQALRGPA*DHISEH
Trigger: GTGCTCTGAGATGTGGTCTCATGCAGGTCCCCTAAG...TGCCTGCAGTGGAAGGATGACCAGCACCAAGAGGAAAAGGAAATGGTTGCCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000338904.7
ENST00000404716.7
ENST00000429244.6
ENST00000553541.5
ENST00000553706.5
ENST00000554964.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
ENST00000611135.1
3UTR-3UTR TCA 90 bp TTGGTGCTGGTCATCCTTCCACTGCAGGCATCTGTATCCGTAACACATTCAAGGCTTAGGGGACCTGCATaGGACCACATCTCAGAGCAC +
Preference number: 2 (lower is better)
Translates to: LVLVILPLQASVSVTHSRLRGPA*DHISEH
Trigger: GTGCTCTGAGATGTGGTCTCATGCAGGTCCCCTAAG...CCTTGAATGTGTTACGGATACAGATGCCTGCAGTGGAAGGATGACCAGCACCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000338904.7
ENST00000404716.7
ENST00000429244.6
ENST00000553541.5
ENST00000553706.5
ENST00000554964.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
ENST00000611135.1
3UTR-3UTR TCA 90 bp AGGCATGCTAACTTAGGGGACCTGCATGAGACCACATCTCAGAGCACCGTCTGTCCTAAGGTGCTTTTGTaGGGTGTTGGGAAAGGAAGA +
Preference number: 2 (lower is better)
Translates to: RHANLGDLHETTSQSTVCPKVLL*GVGKGR
Trigger: TCTTCCTTTCCCAACACCTCACAAAAGCACCTTAGG...ACAGACGGTGCTCTGAGATGTGGTCTCATGCAGGTCCCCTAAGTTAGCATGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000338904.7
ENST00000404716.7
ENST00000429244.6
ENST00000553541.5
ENST00000553706.5
ENST00000554964.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
ENST00000611135.1
3UTR-3UTR GCA 90 bp AGGCATGCTAACTTAGGGGACCTGCATGAGACCACATCTCAGAGCACCGTCTGTGAACCTAGCCTAAGGTaGTTTTGTGAGGTGTTGGGA +
Preference number: 2 (lower is better)
Translates to: RHANLGDLHETTSQSTVCEPSLR*FCEVLG
Trigger: TCCCAACACCTCACAAAAGCACCTTAGGCTAGGTTC...ACAGACGGTGCTCTGAGATGTGGTCTCATGCAGGTCCCCTAAGTTAGCATGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000338904.7
ENST00000404716.7
ENST00000429244.6
ENST00000553541.5
ENST00000553706.5
ENST00000554964.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
ENST00000611135.1
3UTR-3UTR TCA 90 bp CAGGCAACCATTTCCTTTTCCTCTTGGTGCTGGTCATCCTTCCACTGCAGGCATCCTAAGGTGCTTTTGTaGGGTGTTGGGAAAGGAAGA +
Preference number: 2 (lower is better)
Translates to: QATISFSSWCWSSFHCRHPKVLL*GVGKGR
Trigger: TCTTCCTTTCCCAACACCTCACAAAAGCACCTTAGG...ATGCCTGCAGTGGAAGGATGACCAGCACCAAGAGGAAAAGGAAATGGTTGCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000338904.7
ENST00000404716.7
ENST00000429244.6
ENST00000553541.5
ENST00000553706.5
ENST00000554964.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
ENST00000611135.1
3UTR-3UTR GCA 90 bp CAGGCAACCATTTCCTTTTCCTCTTGGTGCTGGTCATCCTTCCACTGCAGGCATGAACCTAGCCTAAGGTaGTTTTGTGAGGTGTTGGGA +
Preference number: 2 (lower is better)
Translates to: QATISFSSWCWSSFHCRHEPSLR*FCEVLG
Trigger: TCCCAACACCTCACAAAAGCACCTTAGGCTAGGTTC...ATGCCTGCAGTGGAAGGATGACCAGCACCAAGAGGAAAAGGAAATGGTTGCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000338904.7
ENST00000404716.7
ENST00000429244.6
ENST00000553541.5
ENST00000553706.5
ENST00000554964.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
ENST00000611135.1
3UTR-3UTR TCA 90 bp CTGCAGGCATCTGTATCCGTAACACATTCAAGGCATGCTAACTTAGGGGACCTGCCTAAGGTGCTTTTGTaGGGTGTTGGGAAAGGAAGA +
Preference number: 2 (lower is better)
Translates to: LQASVSVTHSRHANLGDLPKVLL*GVGKGR
Trigger: TCTTCCTTTCCCAACACCTCACAAAAGCACCTTAGG...CAGGTCCCCTAAGTTAGCATGCCTTGAATGTGTTACGGATACAGATGCCTGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000338904.7
ENST00000404716.7
ENST00000429244.6
ENST00000553541.5
ENST00000553706.5
ENST00000554964.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
ENST00000611135.1
3UTR-3UTR GCA 90 bp CTGCAGGCATCTGTATCCGTAACACATTCAAGGCATGCTAACTTAGGGGACCTGGAACCTAGCCTAAGGTaGTTTTGTGAGGTGTTGGGA +
Preference number: 2 (lower is better)
Translates to: LQASVSVTHSRHANLGDLEPSLR*FCEVLG
Trigger: TCCCAACACCTCACAAAAGCACCTTAGGCTAGGTTC...CAGGTCCCCTAAGTTAGCATGCCTTGAATGTGTTACGGATACAGATGCCTGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000338904.7
ENST00000404716.7
ENST00000429244.6
ENST00000553541.5
ENST00000553706.5
ENST00000554964.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
ENST00000611135.1
3UTR-3UTR TCA 90 bp CAGGCATCTGTATCCGTAACACATTCAAGGCATGCTAACTTAGGGGACCTGCATCCTAAGGTGCTTTTGTaGGGTGTTGGGAAAGGAAGA +
Preference number: 2 (lower is better)
Translates to: QASVSVTHSRHANLGDLHPKVLL*GVGKGR
Trigger: TCTTCCTTTCCCAACACCTCACAAAAGCACCTTAGG...ATGCAGGTCCCCTAAGTTAGCATGCCTTGAATGTGTTACGGATACAGATGCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000338904.7
ENST00000404716.7
ENST00000429244.6
ENST00000553541.5
ENST00000553706.5
ENST00000554964.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
ENST00000611135.1
3UTR-3UTR GCA 90 bp ATTTTTATTCTTTCTGCTGAACTAGAGAATCACATGGATGTGTCTTTGGAGCACTCCTTTTCCTCTTGGTaGTGGTCATCCTTCCACTGC +
Preference number: 2 (lower is better)
Translates to: IFILSAELENHMDVSLEHSFSSW*WSSFHC
Trigger: GCAGTGGAAGGATGACCAGCACCAAGAGGAAAAGGA...GTGCTCCAAAGACACATCCATGTGATTCTCTAGTTCAGCAGAAAGAATAAAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000338904.7
ENST00000404716.7
ENST00000429244.6
ENST00000553541.5
ENST00000553706.5
ENST00000554964.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
ENST00000611135.1
3UTR-3UTR TCA 90 bp ATTTTTATTCTTTCTGCTGAACTAGAGAATCACATGGATGTGTCTTTGGAGCACCCTAAGGTGCTTTTGTaGGGTGTTGGGAAAGGAAGA +
Preference number: 2 (lower is better)
Translates to: IFILSAELENHMDVSLEHPKVLL*GVGKGR
Trigger: TCTTCCTTTCCCAACACCTCACAAAAGCACCTTAGG...GTGCTCCAAAGACACATCCATGTGATTCTCTAGTTCAGCAGAAAGAATAAAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000338904.7
ENST00000404716.7
ENST00000429244.6
ENST00000553541.5
ENST00000553706.5
ENST00000554964.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
ENST00000611135.1
CDS-3UTR GCA 90 bp ACATCTCAGAGCACCGTCTGTGAACCTAGCCTAAGGTGCTTTTGTGAGGTGTTGTCTGGGGCGGCCATGTaGCACACTGTCCCTCCCCTC +
Preference number: 4 (lower is better)
Translates to: TSQSTVCEPSLRCFCEVLSGAAM*HTVPPL
Trigger: GAGGGGAGGGACAGTGTGGCACATGGCCGCCCCAGA...CAACACCTCACAAAAGCACCTTAGGCTAGGTTCACAGACGGTGCTCTGAGATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000555230.5
ENST00000557068.5
CDS-3UTR GCA 90 bp CAGGCATCTGTATCCGTAACACATTCAAGGCATGCTAACTTAGGGGACCTGCATTCTGGGGCGGCCATGTaGCACACTGTCCCTCCCCTC +
Preference number: 4 (lower is better)
Translates to: QASVSVTHSRHANLGDLHSGAAM*HTVPPL
Trigger: GAGGGGAGGGACAGTGTGGCACATGGCCGCCCCAGA...ATGCAGGTCCCCTAAGTTAGCATGCCTTGAATGTGTTACGGATACAGATGCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000555230.5
ENST00000557068.5
CDS-3UTR TCA 90 bp AGGCATGCTAACTTAGGGGACCTGCATGAGACCACATCTCAGAGCACCGTCTGTCTTAGGGGACCTGCATaGGACCACATCTCAGAGCAC +
Preference number: 4 (lower is better)
Translates to: RHANLGDLHETTSQSTVCLRGPA*DHISEH
Trigger: GTGCTCTGAGATGTGGTCTCATGCAGGTCCCCTAAG...ACAGACGGTGCTCTGAGATGTGGTCTCATGCAGGTCCCCTAAGTTAGCATGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000338904.7
ENST00000404716.7
ENST00000429244.6
ENST00000553541.5
ENST00000553706.5
ENST00000554964.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
ENST00000611135.1
CDS-3UTR TCA 90 bp TTAGGGGACCTGCATGAGACCACATCTCAGAGCACCGTCTGTGAACCTAGCCTACTTAGGGGACCTGCATaGGACCACATCTCAGAGCAC +
Preference number: 4 (lower is better)
Translates to: LGDLHETTSQSTVCEPSLLRGPA*DHISEH
Trigger: GTGCTCTGAGATGTGGTCTCATGCAGGTCCCCTAAG...TAGGCTAGGTTCACAGACGGTGCTCTGAGATGTGGTCTCATGCAGGTCCCCTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000338904.7
ENST00000404716.7
ENST00000429244.6
ENST00000553541.5
ENST00000553706.5
ENST00000554964.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
ENST00000611135.1
CDS-3UTR GCA 90 bp GCTGGTCATCCTTCCACTGCAGGCATCTGTATCCGTAACACATTCAAGGCATGCACCAGCTGCAGCAGCTaGTGCGGCAATAGAAGCAGG +
Preference number: 4 (lower is better)
Translates to: AGHPSTAGICIRNTFKACTSCSS*CGNRSR
Trigger: CCTGCTTCTATTGCCGCAGCAGCTGCTGCAGCTGGT...GCATGCCTTGAATGTGTTACGGATACAGATGCCTGCAGTGGAAGGATGACCAGC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000338904.7
ENST00000404716.7
ENST00000429244.6
ENST00000553541.5
ENST00000553706.5
ENST00000554964.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
ENST00000611135.1
CDS-3UTR TCA 90 bp AGGCATGCTAACTTAGGGGACCTGCATGAGACCACATCTCAGAGCACCGTCTGTTCTGTATCCACCTCTTaGAACTGCACCAGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: RHANLGDLHETTSQSTVCSVSTS*NCTSCS
Trigger: GCTGCAGCTGGTGCAGTTTCAAGAGGTGGATACAGA...ACAGACGGTGCTCTGAGATGTGGTCTCATGCAGGTCCCCTAAGTTAGCATGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000338904.7
ENST00000404716.7
ENST00000429244.6
ENST00000553541.5
ENST00000553706.5
ENST00000554964.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
ENST00000611135.1
CDS-3UTR TCA 90 bp GCTGGTCATCCTTCCACTGCAGGCATCTGTATCCGTAACACATTCAAGGCATGCAGAGTGATCCCATGGTaGCAGGTCAGAGAGCTCGGA +
Preference number: 4 (lower is better)
Translates to: AGHPSTAGICIRNTFKACRVIPW*QVRELG
Trigger: TCCGAGCTCTCTGACCTGTCACCATGGGATCACTCT...GCATGCCTTGAATGTGTTACGGATACAGATGCCTGCAGTGGAAGGATGACCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000404716.7
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000611135.1
CDS-3UTR TCA 90 bp TCAGGCAACCATTTCCTTTTCCTCTTGGTGCTGGTCATCCTTCCACTGCAGGCAAGAGTGATCCCATGGTaGCAGGTCAGAGAGCTCGGA +
Preference number: 4 (lower is better)
Translates to: SGNHFLFLLVLVILPLQARVIPW*QVRELG
Trigger: TCCGAGCTCTCTGACCTGTCACCATGGGATCACTCT...TGCCTGCAGTGGAAGGATGACCAGCACCAAGAGGAAAAGGAAATGGTTGCCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000404716.7
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000611135.1
CDS-3UTR CCA 90 bp CAGGCAACCATTTCCTTTTCCTCTTGGTGCTGGTCATCCTTCCACTGCAGGCATGACCATAGATGCCCTTaGGGAAGGGGTCAAGGAAGG +
Preference number: 4 (lower is better)
Translates to: QATISFSSWCWSSFHCRHDHRCP*GRGQGR
Trigger: CCTTCCTTGACCCCTTCCCCAAGGGCATCTATGGTC...ATGCCTGCAGTGGAAGGATGACCAGCACCAAGAGGAAAAGGAAATGGTTGCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000555230.5
ENST00000557068.5
CDS-3UTR TCA 90 bp CAGGCAACCATTTCCTTTTCCTCTTGGTGCTGGTCATCCTTCCACTGCAGGCATTCTGTATCCACCTCTTaGAACTGCACCAGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: QATISFSSWCWSSFHCRHSVSTS*NCTSCS
Trigger: GCTGCAGCTGGTGCAGTTTCAAGAGGTGGATACAGA...ATGCCTGCAGTGGAAGGATGACCAGCACCAAGAGGAAAAGGAAATGGTTGCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000338904.7
ENST00000404716.7
ENST00000429244.6
ENST00000553541.5
ENST00000553706.5
ENST00000554964.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
ENST00000611135.1
CDS-3UTR TCA 90 bp GCTGGTCATCCTTCCACTGCAGGCATCTGTATCCGTAACACATTCAAGGCATGCTCTGTATCCACCTCTTaGAACTGCACCAGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: AGHPSTAGICIRNTFKACSVSTS*NCTSCS
Trigger: GCTGCAGCTGGTGCAGTTTCAAGAGGTGGATACAGA...GCATGCCTTGAATGTGTTACGGATACAGATGCCTGCAGTGGAAGGATGACCAGC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000338904.7
ENST00000404716.7
ENST00000429244.6
ENST00000553541.5
ENST00000553706.5
ENST00000554964.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
ENST00000611135.1
CDS-3UTR TCA 90 bp GAGACCACATCTCAGAGCACCGTCTGTGAACCTAGCCTAAGGTGCTTTTGTGAGTCTGTATCCACCTCTTaGAACTGCACCAGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: ETTSQSTVCEPSLRCFCESVSTS*NCTSCS
Trigger: GCTGCAGCTGGTGCAGTTTCAAGAGGTGGATACAGA...CTCACAAAAGCACCTTAGGCTAGGTTCACAGACGGTGCTCTGAGATGTGGTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000338904.7
ENST00000404716.7
ENST00000429244.6
ENST00000553541.5
ENST00000553706.5
ENST00000554964.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
ENST00000611135.1
CDS-3UTR TCA 90 bp AGGCATGCTAACTTAGGGGACCTGCATGAGACCACATCTCAGAGCACCGTCTGTTCTGCTAGGGCGATATaGCAAAGACACCATCCTCAC +
Preference number: 4 (lower is better)
Translates to: RHANLGDLHETTSQSTVCSARAI*QRHHPH
Trigger: GTGAGGATGGTGTCTTTGTCATATCGCCCTAGCAGA...ACAGACGGTGCTCTGAGATGTGGTCTCATGCAGGTCCCCTAAGTTAGCATGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000338904.7
ENST00000404716.7
ENST00000429244.6
ENST00000553541.5
ENST00000553706.5
ENST00000554964.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
ENST00000611135.1
CDS-3UTR TCA 90 bp ACATCTCAGAGCACCGTCTGTGAACCTAGCCTAAGGTGCTTTTGTGAGGTGTTGCTTAGGGGACCTGCATaGGACCACATCTCAGAGCAC +
Preference number: 4 (lower is better)
Translates to: TSQSTVCEPSLRCFCEVLLRGPA*DHISEH
Trigger: GTGCTCTGAGATGTGGTCTCATGCAGGTCCCCTAAG...CAACACCTCACAAAAGCACCTTAGGCTAGGTTCACAGACGGTGCTCTGAGATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000338904.7
ENST00000404716.7
ENST00000429244.6
ENST00000553541.5
ENST00000553706.5
ENST00000554964.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
ENST00000611135.1
CDS-3UTR TCA 90 bp CTGCAGGCATCTGTATCCGTAACACATTCAAGGCATGCTAACTTAGGGGACCTGCTTAGGGGACCTGCATaGGACCACATCTCAGAGCAC +
Preference number: 4 (lower is better)
Translates to: LQASVSVTHSRHANLGDLLRGPA*DHISEH
Trigger: GTGCTCTGAGATGTGGTCTCATGCAGGTCCCCTAAG...CAGGTCCCCTAAGTTAGCATGCCTTGAATGTGTTACGGATACAGATGCCTGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000338904.7
ENST00000404716.7
ENST00000429244.6
ENST00000553541.5
ENST00000553706.5
ENST00000554964.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
ENST00000611135.1
CDS-3UTR TCA 90 bp AGGCATGCTAACTTAGGGGACCTGCATGAGACCACATCTCAGAGCACCGTCTGTGCCTCTGCAACATCTTaGTCTGTGGAATGCAGGCTT +
Preference number: 4 (lower is better)
Translates to: RHANLGDLHETTSQSTVCASATS*SVECRL
Trigger: AAGCCTGCATTCCACAGATCAAGATGTTGCAGAGGC...ACAGACGGTGCTCTGAGATGTGGTCTCATGCAGGTCCCCTAAGTTAGCATGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000404716.7
ENST00000553706.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
CDS-3UTR TCA 90 bp TTGGTGCTGGTCATCCTTCCACTGCAGGCATCTGTATCCGTAACACATTCAAGGAGAGTGATCCCATGGTaGCAGGTCAGAGAGCTCGGA +
Preference number: 4 (lower is better)
Translates to: LVLVILPLQASVSVTHSRRVIPW*QVRELG
Trigger: TCCGAGCTCTCTGACCTGTCACCATGGGATCACTCT...CCTTGAATGTGTTACGGATACAGATGCCTGCAGTGGAAGGATGACCAGCACCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000404716.7
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000611135.1
CDS-3UTR GCA 90 bp CAGGCATCTGTATCCGTAACACATTCAAGGCATGCTAACTTAGGGGACCTGCATACCAGCTGCAGCAGCTaGTGCGGCAATAGAAGCAGG +
Preference number: 4 (lower is better)
Translates to: QASVSVTHSRHANLGDLHTSCSS*CGNRSR
Trigger: CCTGCTTCTATTGCCGCAGCAGCTGCTGCAGCTGGT...ATGCAGGTCCCCTAAGTTAGCATGCCTTGAATGTGTTACGGATACAGATGCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000338904.7
ENST00000404716.7
ENST00000429244.6
ENST00000553541.5
ENST00000553706.5
ENST00000554964.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
ENST00000611135.1
CDS-3UTR GCA 90 bp AGGCATGCTAACTTAGGGGACCTGCATGAGACCACATCTCAGAGCACCGTCTGTTCCTTTTCCTCTTGGTaGTGGTCATCCTTCCACTGC +
Preference number: 4 (lower is better)
Translates to: RHANLGDLHETTSQSTVCSFSSW*WSSFHC
Trigger: GCAGTGGAAGGATGACCAGCACCAAGAGGAAAAGGA...ACAGACGGTGCTCTGAGATGTGGTCTCATGCAGGTCCCCTAAGTTAGCATGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000338904.7
ENST00000404716.7
ENST00000429244.6
ENST00000553541.5
ENST00000553706.5
ENST00000554964.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
ENST00000611135.1
CDS-3UTR GCA 90 bp AGGCATGCTAACTTAGGGGACCTGCATGAGACCACATCTCAGAGCACCGTCTGTAGAACGCGGAGCCTCTaGAACATCTTGATCTGTGGA +
Preference number: 4 (lower is better)
Translates to: RHANLGDLHETTSQSTVCRTRSL*NILICG
Trigger: TCCACAGATCAAGATGTTGCAGAGGCTCCGCGTTCT...ACAGACGGTGCTCTGAGATGTGGTCTCATGCAGGTCCCCTAAGTTAGCATGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000404716.7
ENST00000553706.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
CDS-3UTR GCA 90 bp TTAGGGGACCTGCATGAGACCACATCTCAGAGCACCGTCTGTGAACCTAGCCTAAGAACGCGGAGCCTCTaGAACATCTTGATCTGTGGA +
Preference number: 4 (lower is better)
Translates to: LGDLHETTSQSTVCEPSLRTRSL*NILICG
Trigger: TCCACAGATCAAGATGTTGCAGAGGCTCCGCGTTCT...TAGGCTAGGTTCACAGACGGTGCTCTGAGATGTGGTCTCATGCAGGTCCCCTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000404716.7
ENST00000553706.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
CDS-3UTR CCA 90 bp AGGCATGCTAACTTAGGGGACCTGCATGAGACCACATCTCAGAGCACCGTCTGTTTTTTCTTTGGTAGGTaGTCTGGCGGGCCCTGTACT +
Preference number: 4 (lower is better)
Translates to: RHANLGDLHETTSQSTVCFFFGR*SGGPCT
Trigger: AGTACAGGGCCCGCCAGACCACCTACCAAAGAAAAA...ACAGACGGTGCTCTGAGATGTGGTCTCATGCAGGTCCCCTAAGTTAGCATGCCT
52% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 11 transcripts:
ENST00000338904.7
ENST00000404716.7
ENST00000429244.6
ENST00000553541.5
ENST00000553706.5
ENST00000554964.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
ENST00000611135.1
CDS-3UTR TCA 90 bp TTAGGGGACCTGCATGAGACCACATCTCAGAGCACCGTCTGTGAACCTAGCCTAAGACACCATCCTCACTaGGGAAACTTCTGTGTTCAG +
Preference number: 4 (lower is better)
Translates to: LGDLHETTSQSTVCEPSLRHHPH*GNFCVQ
Trigger: CTGAACACAGAAGTTTCCTCAGTGAGGATGGTGTCT...TAGGCTAGGTTCACAGACGGTGCTCTGAGATGTGGTCTCATGCAGGTCCCCTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000338904.7
ENST00000404716.7
ENST00000429244.6
ENST00000553541.5
ENST00000553706.5
ENST00000554964.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
ENST00000611135.1
CDS-3UTR TCA 90 bp GCTGGTCATCCTTCCACTGCAGGCATCTGTATCCGTAACACATTCAAGGCATGCTCTGCTAGGGCGATATaGCAAAGACACCATCCTCAC +
Preference number: 4 (lower is better)
Translates to: AGHPSTAGICIRNTFKACSARAI*QRHHPH
Trigger: GTGAGGATGGTGTCTTTGTCATATCGCCCTAGCAGA...GCATGCCTTGAATGTGTTACGGATACAGATGCCTGCAGTGGAAGGATGACCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000338904.7
ENST00000404716.7
ENST00000429244.6
ENST00000553541.5
ENST00000553706.5
ENST00000554964.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
ENST00000611135.1
CDS-3UTR TCA 90 bp CAGGCAACCATTTCCTTTTCCTCTTGGTGCTGGTCATCCTTCCACTGCAGGCATTCTGCTAGGGCGATATaGCAAAGACACCATCCTCAC +
Preference number: 4 (lower is better)
Translates to: QATISFSSWCWSSFHCRHSARAI*QRHHPH
Trigger: GTGAGGATGGTGTCTTTGTCATATCGCCCTAGCAGA...ATGCCTGCAGTGGAAGGATGACCAGCACCAAGAGGAAAAGGAAATGGTTGCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000338904.7
ENST00000404716.7
ENST00000429244.6
ENST00000553541.5
ENST00000553706.5
ENST00000554964.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
ENST00000611135.1
CDS-3UTR TCA 90 bp TTAGGGGACCTGCATGAGACCACATCTCAGAGCACCGTCTGTGAACCTAGCCTACCTAAGGTGCTTTTGTaGGGTGTTGGGAAAGGAAGA +
Preference number: 4 (lower is better)
Translates to: LGDLHETTSQSTVCEPSLPKVLL*GVGKGR
Trigger: TCTTCCTTTCCCAACACCTCACAAAAGCACCTTAGG...TAGGCTAGGTTCACAGACGGTGCTCTGAGATGTGGTCTCATGCAGGTCCCCTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000338904.7
ENST00000404716.7
ENST00000429244.6
ENST00000553541.5
ENST00000553706.5
ENST00000554964.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
ENST00000611135.1
CDS-3UTR TCA 90 bp GCTGGTCATCCTTCCACTGCAGGCATCTGTATCCGTAACACATTCAAGGCATGCGCCTCTGCAACATCTTaGTCTGTGGAATGCAGGCTT +
Preference number: 4 (lower is better)
Translates to: AGHPSTAGICIRNTFKACASATS*SVECRL
Trigger: AAGCCTGCATTCCACAGATCAAGATGTTGCAGAGGC...GCATGCCTTGAATGTGTTACGGATACAGATGCCTGCAGTGGAAGGATGACCAGC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000404716.7
ENST00000553706.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
CDS-3UTR TCA 90 bp CAGGCATCTGTATCCGTAACACATTCAAGGCATGCTAACTTAGGGGACCTGCATCCTAAAATGGCGATGTaGGAATGGGCACTCTGGGGC +
Preference number: 4 (lower is better)
Translates to: QASVSVTHSRHANLGDLHPKMAM*EWALWG
Trigger: GCCCCAGAGTGCCCATTCTCACATCGCCATTTTAGG...ATGCAGGTCCCCTAAGTTAGCATGCCTTGAATGTGTTACGGATACAGATGCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000555230.5
ENST00000557068.5
CDS-3UTR GCA 90 bp TTAGGGGACCTGCATGAGACCACATCTCAGAGCACCGTCTGTGAACCTAGCCTAGAACCTAGCCTAAGGTaGTTTTGTGAGGTGTTGGGA +
Preference number: 4 (lower is better)
Translates to: LGDLHETTSQSTVCEPSLEPSLR*FCEVLG
Trigger: TCCCAACACCTCACAAAAGCACCTTAGGCTAGGTTC...TAGGCTAGGTTCACAGACGGTGCTCTGAGATGTGGTCTCATGCAGGTCCCCTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000338904.7
ENST00000404716.7
ENST00000429244.6
ENST00000553541.5
ENST00000553706.5
ENST00000554964.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
ENST00000611135.1
CDS-3UTR GCA 90 bp CAGGCAACCATTTCCTTTTCCTCTTGGTGCTGGTCATCCTTCCACTGCAGGCATTCCTTTTCCTCTTGGTaGTGGTCATCCTTCCACTGC +
Preference number: 4 (lower is better)
Translates to: QATISFSSWCWSSFHCRHSFSSW*WSSFHC
Trigger: GCAGTGGAAGGATGACCAGCACCAAGAGGAAAAGGA...ATGCCTGCAGTGGAAGGATGACCAGCACCAAGAGGAAAAGGAAATGGTTGCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000338904.7
ENST00000404716.7
ENST00000429244.6
ENST00000553541.5
ENST00000553706.5
ENST00000554964.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
ENST00000611135.1
CDS-3UTR GCA 90 bp GAGACCACATCTCAGAGCACCGTCTGTGAACCTAGCCTAAGGTGCTTTTGTGAGTCCTTTTCCTCTTGGTaGTGGTCATCCTTCCACTGC +
Preference number: 4 (lower is better)
Translates to: ETTSQSTVCEPSLRCFCESFSSW*WSSFHC
Trigger: GCAGTGGAAGGATGACCAGCACCAAGAGGAAAAGGA...CTCACAAAAGCACCTTAGGCTAGGTTCACAGACGGTGCTCTGAGATGTGGTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000338904.7
ENST00000404716.7
ENST00000429244.6
ENST00000553541.5
ENST00000553706.5
ENST00000554964.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
ENST00000611135.1
CDS-3UTR GCA 90 bp GCTGGTCATCCTTCCACTGCAGGCATCTGTATCCGTAACACATTCAAGGCATGCTGTGGGGCACAGTTATaGCACATGTTGCTGTTCTGG +
Preference number: 4 (lower is better)
Translates to: AGHPSTAGICIRNTFKACCGAQL*HMLLFW
Trigger: CCAGAACAGCAACATGTGGCATAACTGTGCCCCACA...GCATGCCTTGAATGTGTTACGGATACAGATGCCTGCAGTGGAAGGATGACCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555230.5
ENST00000557068.5
CDS-3UTR GCA 90 bp CAGGCAACCATTTCCTTTTCCTCTTGGTGCTGGTCATCCTTCCACTGCAGGCATAGAACGCGGAGCCTCTaGAACATCTTGATCTGGAGA +
Preference number: 4 (lower is better)
Translates to: QATISFSSWCWSSFHCRHRTRSL*NILIWR
Trigger: TCTCCAGATCAAGATGTTGCAGAGGCTCCGCGTTCT...ATGCCTGCAGTGGAAGGATGACCAGCACCAAGAGGAAAAGGAAATGGTTGCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611135.1
CDS-3UTR CCA 90 bp TCAGGCAACCATTTCCTTTTCCTCTTGGTGCTGGTCATCCTTCCACTGCAGGCATTTTTCTTTGGTAGGTaGTCTGGCGGGCCCTGTACT +
Preference number: 4 (lower is better)
Translates to: SGNHFLFLLVLVILPLQAFFFGR*SGGPCT
Trigger: AGTACAGGGCCCGCCAGACCACCTACCAAAGAAAAA...TGCCTGCAGTGGAAGGATGACCAGCACCAAGAGGAAAAGGAAATGGTTGCCTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000338904.7
ENST00000404716.7
ENST00000429244.6
ENST00000553541.5
ENST00000553706.5
ENST00000554964.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
ENST00000611135.1
CDS-3UTR CCA 90 bp GCTGGTCATCCTTCCACTGCAGGCATCTGTATCCGTAACACATTCAAGGCATGCTTTTCCTCTTGGTGCTaGTCATCCTTCCACTGCAGG +
Preference number: 4 (lower is better)
Translates to: AGHPSTAGICIRNTFKACFSSWC*SSFHCR
Trigger: CCTGCAGTGGAAGGATGACCAGCACCAAGAGGAAAA...GCATGCCTTGAATGTGTTACGGATACAGATGCCTGCAGTGGAAGGATGACCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000338904.7
ENST00000404716.7
ENST00000429244.6
ENST00000553541.5
ENST00000553706.5
ENST00000554964.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
ENST00000611135.1
CDS-3UTR CCA 90 bp CAGGCAACCATTTCCTTTTCCTCTTGGTGCTGGTCATCCTTCCACTGCAGGCATTTTTCCTCTTGGTGCTaGTCATCCTTCCACTGCAGG +
Preference number: 4 (lower is better)
Translates to: QATISFSSWCWSSFHCRHFSSWC*SSFHCR
Trigger: CCTGCAGTGGAAGGATGACCAGCACCAAGAGGAAAA...ATGCCTGCAGTGGAAGGATGACCAGCACCAAGAGGAAAAGGAAATGGTTGCCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000338904.7
ENST00000404716.7
ENST00000429244.6
ENST00000553541.5
ENST00000553706.5
ENST00000554964.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
ENST00000611135.1
CDS-3UTR CCA 90 bp TTAGGGGACCTGCATGAGACCACATCTCAGAGCACCGTCTGTGAACCTAGCCTATTCCTGCAGACACTGTaGAATGCAGGCTTCTTGGTT +
Preference number: 4 (lower is better)
Translates to: LGDLHETTSQSTVCEPSLFLQTL*NAGFLV
Trigger: AACCAAGAAGCCTGCATTCCACAGTGTCTGCAGGAA...TAGGCTAGGTTCACAGACGGTGCTCTGAGATGTGGTCTCATGCAGGTCCCCTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553541.5
ENST00000554964.5
CDS-3UTR CCA 90 bp TTAGGGGACCTGCATGAGACCACATCTCAGAGCACCGTCTGTGAACCTAGCCTACTTCCATTTCCTGTGTaGGGCACAGTTATGCCACAT +
Preference number: 4 (lower is better)
Translates to: LGDLHETTSQSTVCEPSLLPFPV*GTVMPH
Trigger: ATGTGGCATAACTGTGCCCCACACAGGAAATGGAAG...TAGGCTAGGTTCACAGACGGTGCTCTGAGATGTGGTCTCATGCAGGTCCCCTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555230.5
ENST00000557068.5
CDS-3UTR TCA 90 bp TTAGGGGACCTGCATGAGACCACATCTCAGAGCACCGTCTGTGAACCTAGCCTACAAGAGGCACTATGTTaGCTCACAGAAGTTGGAAGT +
Preference number: 4 (lower is better)
Translates to: LGDLHETTSQSTVCEPSLQEALC*LTEVGS
Trigger: ACTTCCAACTTCTGTGAGTCAACATAGTGCCTCTTG...TAGGCTAGGTTCACAGACGGTGCTCTGAGATGTGGTCTCATGCAGGTCCCCTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000338904.7
ENST00000404716.7
ENST00000429244.6
ENST00000553541.5
ENST00000553706.5
ENST00000554964.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
CDS-3UTR TCA 90 bp CAGGCATCTGTATCCGTAACACATTCAAGGCATGCTAACTTAGGGGACCTGCATTCTGTATCCACCTCTTaGAACTGCACCAGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: QASVSVTHSRHANLGDLHSVSTS*NCTSCS
Trigger: GCTGCAGCTGGTGCAGTTTCAAGAGGTGGATACAGA...ATGCAGGTCCCCTAAGTTAGCATGCCTTGAATGTGTTACGGATACAGATGCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000338904.7
ENST00000404716.7
ENST00000429244.6
ENST00000553541.5
ENST00000553706.5
ENST00000554964.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
ENST00000611135.1
CDS-3UTR TCA 90 bp AGGCATGCTAACTTAGGGGACCTGCATGAGACCACATCTCAGAGCACCGTCTGTGCCCTTCCTATAAAGTaGTTCGTATTTACACGCTGG +
Preference number: 4 (lower is better)
Translates to: RHANLGDLHETTSQSTVCALPIK*FVFTRW
Trigger: CCAGCGTGTAAATACGAATCACTTTATAGGAAGGGC...ACAGACGGTGCTCTGAGATGTGGTCTCATGCAGGTCCCCTAAGTTAGCATGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000338904.7
ENST00000404716.7
ENST00000429244.6
ENST00000553541.5
ENST00000553706.5
ENST00000554964.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
ENST00000611135.1
CDS-3UTR TCA 90 bp TTAGGGGACCTGCATGAGACCACATCTCAGAGCACCGTCTGTGAACCTAGCCTAGCCCTTCCTATAAAGTaGTTCGTATTTACACGCTGG +
Preference number: 4 (lower is better)
Translates to: LGDLHETTSQSTVCEPSLALPIK*FVFTRW
Trigger: CCAGCGTGTAAATACGAATCACTTTATAGGAAGGGC...TAGGCTAGGTTCACAGACGGTGCTCTGAGATGTGGTCTCATGCAGGTCCCCTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000338904.7
ENST00000404716.7
ENST00000429244.6
ENST00000553541.5
ENST00000553706.5
ENST00000554964.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
ENST00000611135.1
CDS-3UTR TCA 90 bp TCAGGCAACCATTTCCTTTTCCTCTTGGTGCTGGTCATCCTTCCACTGCAGGCAAGACACCATCCTCACTaGGGAAACTTCTGTGTTCAG +
Preference number: 4 (lower is better)
Translates to: SGNHFLFLLVLVILPLQARHHPH*GNFCVQ
Trigger: CTGAACACAGAAGTTTCCTCAGTGAGGATGGTGTCT...TGCCTGCAGTGGAAGGATGACCAGCACCAAGAGGAAAAGGAAATGGTTGCCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000338904.7
ENST00000404716.7
ENST00000429244.6
ENST00000553541.5
ENST00000553706.5
ENST00000554964.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
ENST00000611135.1
CDS-3UTR TCA 90 bp GCTGGTCATCCTTCCACTGCAGGCATCTGTATCCGTAACACATTCAAGGCATGCAGACACCATCCTCACTaGGGAAACTTCTGTGTTCAG +
Preference number: 4 (lower is better)
Translates to: AGHPSTAGICIRNTFKACRHHPH*GNFCVQ
Trigger: CTGAACACAGAAGTTTCCTCAGTGAGGATGGTGTCT...GCATGCCTTGAATGTGTTACGGATACAGATGCCTGCAGTGGAAGGATGACCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000338904.7
ENST00000404716.7
ENST00000429244.6
ENST00000553541.5
ENST00000553706.5
ENST00000554964.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
ENST00000611135.1
CDS-3UTR TCA 90 bp GAGACCACATCTCAGAGCACCGTCTGTGAACCTAGCCTAAGGTGCTTTTGTGAGAGACACCATCCTCACTaGGGAAACTTCTGTGTTCAG +
Preference number: 4 (lower is better)
Translates to: ETTSQSTVCEPSLRCFCERHHPH*GNFCVQ
Trigger: CTGAACACAGAAGTTTCCTCAGTGAGGATGGTGTCT...CTCACAAAAGCACCTTAGGCTAGGTTCACAGACGGTGCTCTGAGATGTGGTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000338904.7
ENST00000404716.7
ENST00000429244.6
ENST00000553541.5
ENST00000553706.5
ENST00000554964.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
ENST00000611135.1
CDS-3UTR TCA 90 bp CTGCAGGCATCTGTATCCGTAACACATTCAAGGCATGCTAACTTAGGGGACCTGTCTGCTAGGGCGATATaGCAAAGACACCATCCTCAC +
Preference number: 4 (lower is better)
Translates to: LQASVSVTHSRHANLGDLSARAI*QRHHPH
Trigger: GTGAGGATGGTGTCTTTGTCATATCGCCCTAGCAGA...CAGGTCCCCTAAGTTAGCATGCCTTGAATGTGTTACGGATACAGATGCCTGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000338904.7
ENST00000404716.7
ENST00000429244.6
ENST00000553541.5
ENST00000553706.5
ENST00000554964.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
ENST00000611135.1
CDS-3UTR TCA 90 bp TTGGTGCTGGTCATCCTTCCACTGCAGGCATCTGTATCCGTAACACATTCAAGGTCTGCTAGGGCGATATaGCAAAGACACCATCCTCAC +
Preference number: 4 (lower is better)
Translates to: LVLVILPLQASVSVTHSRSARAI*QRHHPH
Trigger: GTGAGGATGGTGTCTTTGTCATATCGCCCTAGCAGA...CCTTGAATGTGTTACGGATACAGATGCCTGCAGTGGAAGGATGACCAGCACCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000338904.7
ENST00000404716.7
ENST00000429244.6
ENST00000553541.5
ENST00000553706.5
ENST00000554964.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
ENST00000611135.1
CDS-3UTR TCA 90 bp GCTGGTCATCCTTCCACTGCAGGCATCTGTATCCGTAACACATTCAAGGCATGCCCTAAGGTGCTTTTGTaGGGTGTTGGGAAAGGAAGA +
Preference number: 4 (lower is better)
Translates to: AGHPSTAGICIRNTFKACPKVLL*GVGKGR
Trigger: TCTTCCTTTCCCAACACCTCACAAAAGCACCTTAGG...GCATGCCTTGAATGTGTTACGGATACAGATGCCTGCAGTGGAAGGATGACCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000338904.7
ENST00000404716.7
ENST00000429244.6
ENST00000553541.5
ENST00000553706.5
ENST00000554964.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
ENST00000611135.1
CDS-3UTR TCA 90 bp CTGCAGGCATCTGTATCCGTAACACATTCAAGGCATGCTAACTTAGGGGACCTGGCCTCTGCAACATCTTaGTCTGTGGAATGCAGGCTT +
Preference number: 4 (lower is better)
Translates to: LQASVSVTHSRHANLGDLASATS*SVECRL
Trigger: AAGCCTGCATTCCACAGATCAAGATGTTGCAGAGGC...CAGGTCCCCTAAGTTAGCATGCCTTGAATGTGTTACGGATACAGATGCCTGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000404716.7
ENST00000553706.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
CDS-3UTR TCA 90 bp CTGCAGGCATCTGTATCCGTAACACATTCAAGGCATGCTAACTTAGGGGACCTGACCTTGATCTATCAGTaGTGGAGATGGACAGCCTCC +
Preference number: 4 (lower is better)
Translates to: LQASVSVTHSRHANLGDLTLIYQ*WRWTAS
Trigger: GGAGGCTGTCCATCTCCATCACTGATAGATCAAGGT...CAGGTCCCCTAAGTTAGCATGCCTTGAATGTGTTACGGATACAGATGCCTGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555230.5
ENST00000557068.5
CDS-3UTR TCA 90 bp CAGGCAACCATTTCCTTTTCCTCTTGGTGCTGGTCATCCTTCCACTGCAGGCATGGCTGTCAAACACAATaGCTACTGAAATGGCCAGTG +
Preference number: 4 (lower is better)
Translates to: QATISFSSWCWSSFHCRHGCQTQ*LLKWPV
Trigger: CACTGGCCATTTCAGTAGTCATTGTGTTTGACAGCC...ATGCCTGCAGTGGAAGGATGACCAGCACCAAGAGGAAAAGGAAATGGTTGCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555230.5
ENST00000557068.5
CDS-3UTR TCA 90 bp CAGGCATCTGTATCCGTAACACATTCAAGGCATGCTAACTTAGGGGACCTGCATGTTGAGAACTTGCTCTaGAAAGAGCCACCCTCCCCT +
Preference number: 4 (lower is better)
Translates to: QASVSVTHSRHANLGDLHVENLL*KEPPSP
Trigger: AGGGGAGGGTGGCTCTTTTCAGAGCAAGTTCTCAAC...ATGCAGGTCCCCTAAGTTAGCATGCCTTGAATGTGTTACGGATACAGATGCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000555230.5
ENST00000557068.5
CDS-3UTR TCA 90 bp AGGCATGCTAACTTAGGGGACCTGCATGAGACCACATCTCAGAGCACCGTCTGTTCCCTTTCCAGGAGTTaGGAACTTGCTCTGAAAAGA +
Preference number: 4 (lower is better)
Translates to: RHANLGDLHETTSQSTVCSLSRS*ELALKR
Trigger: TCTTTTCAGAGCAAGTTCTCAACTCCTGGAAAGGGA...ACAGACGGTGCTCTGAGATGTGGTCTCATGCAGGTCCCCTAAGTTAGCATGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000555230.5
ENST00000557068.5
CDS-3UTR GCA 90 bp GAGACCACATCTCAGAGCACCGTCTGTGAACCTAGCCTAAGGTGCTTTTGTGAGGAACCTAGCCTAAGGTaGTTTTGTGAGGTGTTGGGA +
Preference number: 4 (lower is better)
Translates to: ETTSQSTVCEPSLRCFCEEPSLR*FCEVLG
Trigger: TCCCAACACCTCACAAAAGCACCTTAGGCTAGGTTC...CTCACAAAAGCACCTTAGGCTAGGTTCACAGACGGTGCTCTGAGATGTGGTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000338904.7
ENST00000404716.7
ENST00000429244.6
ENST00000553541.5
ENST00000553706.5
ENST00000554964.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
ENST00000611135.1
CDS-3UTR GCA 90 bp GCTGGTCATCCTTCCACTGCAGGCATCTGTATCCGTAACACATTCAAGGCATGCGAACCTAGCCTAAGGTaGTTTTGTGAGGTGTTGGGA +
Preference number: 4 (lower is better)
Translates to: AGHPSTAGICIRNTFKACEPSLR*FCEVLG
Trigger: TCCCAACACCTCACAAAAGCACCTTAGGCTAGGTTC...GCATGCCTTGAATGTGTTACGGATACAGATGCCTGCAGTGGAAGGATGACCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000338904.7
ENST00000404716.7
ENST00000429244.6
ENST00000553541.5
ENST00000553706.5
ENST00000554964.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
ENST00000611135.1
CDS-3UTR GCA 90 bp TTGGTGCTGGTCATCCTTCCACTGCAGGCATCTGTATCCGTAACACATTCAAGGTCCTTTTCCTCTTGGTaGTGGTCATCCTTCCACTGC +
Preference number: 4 (lower is better)
Translates to: LVLVILPLQASVSVTHSRSFSSW*WSSFHC
Trigger: GCAGTGGAAGGATGACCAGCACCAAGAGGAAAAGGA...CCTTGAATGTGTTACGGATACAGATGCCTGCAGTGGAAGGATGACCAGCACCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000338904.7
ENST00000404716.7
ENST00000429244.6
ENST00000553541.5
ENST00000553706.5
ENST00000554964.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
ENST00000611135.1
CDS-3UTR GCA 90 bp CTGCAGGCATCTGTATCCGTAACACATTCAAGGCATGCTAACTTAGGGGACCTGTCCTTTTCCTCTTGGTaGTGGTCATCCTTCCACTGC +
Preference number: 4 (lower is better)
Translates to: LQASVSVTHSRHANLGDLSFSSW*WSSFHC
Trigger: GCAGTGGAAGGATGACCAGCACCAAGAGGAAAAGGA...CAGGTCCCCTAAGTTAGCATGCCTTGAATGTGTTACGGATACAGATGCCTGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000338904.7
ENST00000404716.7
ENST00000429244.6
ENST00000553541.5
ENST00000553706.5
ENST00000554964.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
ENST00000611135.1
CDS-3UTR GCA 90 bp ACATCTCAGAGCACCGTCTGTGAACCTAGCCTAAGGTGCTTTTGTGAGGTGTTGTCCTTTTCCTCTTGGTaGTGGTCATCCTTCCACTGC +
Preference number: 4 (lower is better)
Translates to: TSQSTVCEPSLRCFCEVLSFSSW*WSSFHC
Trigger: GCAGTGGAAGGATGACCAGCACCAAGAGGAAAAGGA...CAACACCTCACAAAAGCACCTTAGGCTAGGTTCACAGACGGTGCTCTGAGATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000338904.7
ENST00000404716.7
ENST00000429244.6
ENST00000553541.5
ENST00000553706.5
ENST00000554964.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
ENST00000611135.1
CDS-3UTR GCA 90 bp CTGCAGGCATCTGTATCCGTAACACATTCAAGGCATGCTAACTTAGGGGACCTGAGAACGCGGAGCCTCTaGAACATCTTGATCTGTGGA +
Preference number: 4 (lower is better)
Translates to: LQASVSVTHSRHANLGDLRTRSL*NILICG
Trigger: TCCACAGATCAAGATGTTGCAGAGGCTCCGCGTTCT...CAGGTCCCCTAAGTTAGCATGCCTTGAATGTGTTACGGATACAGATGCCTGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000404716.7
ENST00000553706.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
CDS-3UTR GCA 90 bp AGGCATGCTAACTTAGGGGACCTGCATGAGACCACATCTCAGAGCACCGTCTGTTTATTTGACCATAGATaGCCTTGGGGAAGGGGTCAA +
Preference number: 4 (lower is better)
Translates to: RHANLGDLHETTSQSTVCLFDHR*PWGRGQ
Trigger: TTGACCCCTTCCCCAAGGGCATCTATGGTCAAATAA...ACAGACGGTGCTCTGAGATGTGGTCTCATGCAGGTCCCCTAAGTTAGCATGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000555230.5
ENST00000557068.5
CDS-3UTR GCA 90 bp GCTGGTCATCCTTCCACTGCAGGCATCTGTATCCGTAACACATTCAAGGCATGCCAGGAGTTGAGAACTTaGTCTGAAAAGAGCCACCCT +
Preference number: 4 (lower is better)
Translates to: AGHPSTAGICIRNTFKACQELRT*SEKSHP
Trigger: AGGGTGGCTCTTTTCAGAGCAAGTTCTCAACTCCTG...GCATGCCTTGAATGTGTTACGGATACAGATGCCTGCAGTGGAAGGATGACCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555230.5
ENST00000557068.5
CDS-3UTR CCA 90 bp CTGCAGGCATCTGTATCCGTAACACATTCAAGGCATGCTAACTTAGGGGACCTGTTTTTCTTTGGTAGGTaGTCTGGCGGGCCCTGTACT +
Preference number: 4 (lower is better)
Translates to: LQASVSVTHSRHANLGDLFFFGR*SGGPCT
Trigger: AGTACAGGGCCCGCCAGACCACCTACCAAAGAAAAA...CAGGTCCCCTAAGTTAGCATGCCTTGAATGTGTTACGGATACAGATGCCTGCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000338904.7
ENST00000404716.7
ENST00000429244.6
ENST00000553541.5
ENST00000553706.5
ENST00000554964.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
ENST00000611135.1
CDS-3UTR CCA 90 bp ACATCTCAGAGCACCGTCTGTGAACCTAGCCTAAGGTGCTTTTGTGAGGTGTTGTTTTCCTCTTGGTGCTaGTCATCCTTCCACTGCAGG +
Preference number: 4 (lower is better)
Translates to: TSQSTVCEPSLRCFCEVLFSSWC*SSFHCR
Trigger: CCTGCAGTGGAAGGATGACCAGCACCAAGAGGAAAA...CAACACCTCACAAAAGCACCTTAGGCTAGGTTCACAGACGGTGCTCTGAGATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000338904.7
ENST00000404716.7
ENST00000429244.6
ENST00000553541.5
ENST00000553706.5
ENST00000554964.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
ENST00000611135.1
CDS-3UTR CCA 90 bp TTGGTGCTGGTCATCCTTCCACTGCAGGCATCTGTATCCGTAACACATTCAAGGTTTTCCTCTTGGTGCTaGTCATCCTTCCACTGCAGG +
Preference number: 4 (lower is better)
Translates to: LVLVILPLQASVSVTHSRFSSWC*SSFHCR
Trigger: CCTGCAGTGGAAGGATGACCAGCACCAAGAGGAAAA...CCTTGAATGTGTTACGGATACAGATGCCTGCAGTGGAAGGATGACCAGCACCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000338904.7
ENST00000404716.7
ENST00000429244.6
ENST00000553541.5
ENST00000553706.5
ENST00000554964.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
ENST00000611135.1
CDS-3UTR CCA 90 bp AGGCATGCTAACTTAGGGGACCTGCATGAGACCACATCTCAGAGCACCGTCTGTATTTCCTTTTCCTCTTaGTGCTGGTCATCCTTCCAC +
Preference number: 4 (lower is better)
Translates to: RHANLGDLHETTSQSTVCISFSS*CWSSFH
Trigger: GTGGAAGGATGACCAGCACCAAGAGGAAAAGGAAAT...ACAGACGGTGCTCTGAGATGTGGTCTCATGCAGGTCCCCTAAGTTAGCATGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000338904.7
ENST00000404716.7
ENST00000429244.6
ENST00000553541.5
ENST00000553706.5
ENST00000554964.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
ENST00000611135.1
CDS-3UTR CCA 90 bp TTAGGGGACCTGCATGAGACCACATCTCAGAGCACCGTCTGTGAACCTAGCCTAATTTCCTTTTCCTCTTaGTGCTGGTCATCCTTCCAC +
Preference number: 4 (lower is better)
Translates to: LGDLHETTSQSTVCEPSLISFSS*CWSSFH
Trigger: GTGGAAGGATGACCAGCACCAAGAGGAAAAGGAAAT...TAGGCTAGGTTCACAGACGGTGCTCTGAGATGTGGTCTCATGCAGGTCCCCTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000338904.7
ENST00000404716.7
ENST00000429244.6
ENST00000553541.5
ENST00000553706.5
ENST00000554964.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
ENST00000611135.1
CDS-3UTR CCA 90 bp TCAGGCAACCATTTCCTTTTCCTCTTGGTGCTGGTCATCCTTCCACTGCAGGCATTCCTGCAGACACTGTaGAATGCAGGCTTCTTGGTT +
Preference number: 4 (lower is better)
Translates to: SGNHFLFLLVLVILPLQAFLQTL*NAGFLV
Trigger: AACCAAGAAGCCTGCATTCCACAGTGTCTGCAGGAA...TGCCTGCAGTGGAAGGATGACCAGCACCAAGAGGAAAAGGAAATGGTTGCCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553541.5
ENST00000554964.5
CDS-3UTR CCA 90 bp GCTGGTCATCCTTCCACTGCAGGCATCTGTATCCGTAACACATTCAAGGCATGCGATCCGGCAGACTCCTaGTTCAAGCCTATTTTTGTC +
Preference number: 4 (lower is better)
Translates to: AGHPSTAGICIRNTFKACDPADS*FKPIFV
Trigger: GACAAAAATAGGCTTGAACCAGGAGTCTGCCGGATC...GCATGCCTTGAATGTGTTACGGATACAGATGCCTGCAGTGGAAGGATGACCAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000555230.5
ENST00000557068.5
CDS-3UTR CCA 90 bp GCTGGTCATCCTTCCACTGCAGGCATCTGTATCCGTAACACATTCAAGGCATGCCTTCCATTTCCTGTGTaGGGCACAGTTATGCCACAT +
Preference number: 4 (lower is better)
Translates to: AGHPSTAGICIRNTFKACLPFPV*GTVMPH
Trigger: ATGTGGCATAACTGTGCCCCACACAGGAAATGGAAG...GCATGCCTTGAATGTGTTACGGATACAGATGCCTGCAGTGGAAGGATGACCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555230.5
ENST00000557068.5
CDS-3UTR TCA 90 bp GAGACCACATCTCAGAGCACCGTCTGTGAACCTAGCCTAAGGTGCTTTTGTGAGCAAGAGGCACTATGTTaGCTCACAGAAGTTGGAAGT +
Preference number: 4 (lower is better)
Translates to: ETTSQSTVCEPSLRCFCEQEALC*LTEVGS
Trigger: ACTTCCAACTTCTGTGAGTCAACATAGTGCCTCTTG...CTCACAAAAGCACCTTAGGCTAGGTTCACAGACGGTGCTCTGAGATGTGGTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000338904.7
ENST00000404716.7
ENST00000429244.6
ENST00000553541.5
ENST00000553706.5
ENST00000554964.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
CDS-3UTR TCA 90 bp TCAGGCAACCATTTCCTTTTCCTCTTGGTGCTGGTCATCCTTCCACTGCAGGCACAAGAGGCACTATGTTaGCTCACAGAAGTTGGAAGT +
Preference number: 4 (lower is better)
Translates to: SGNHFLFLLVLVILPLQAQEALC*LTEVGS
Trigger: ACTTCCAACTTCTGTGAGTCAACATAGTGCCTCTTG...TGCCTGCAGTGGAAGGATGACCAGCACCAAGAGGAAAAGGAAATGGTTGCCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000338904.7
ENST00000404716.7
ENST00000429244.6
ENST00000553541.5
ENST00000553706.5
ENST00000554964.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
CDS-3UTR TCA 90 bp GAGACCACATCTCAGAGCACCGTCTGTGAACCTAGCCTAAGGTGCTTTTGTGAGGCCCTTCCTATAAAGTaGTTCGTATTTACACGCTGG +
Preference number: 4 (lower is better)
Translates to: ETTSQSTVCEPSLRCFCEALPIK*FVFTRW
Trigger: CCAGCGTGTAAATACGAATCACTTTATAGGAAGGGC...CTCACAAAAGCACCTTAGGCTAGGTTCACAGACGGTGCTCTGAGATGTGGTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000338904.7
ENST00000404716.7
ENST00000429244.6
ENST00000553541.5
ENST00000553706.5
ENST00000554964.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
ENST00000611135.1
CDS-3UTR TCA 90 bp CAGGCAACCATTTCCTTTTCCTCTTGGTGCTGGTCATCCTTCCACTGCAGGCATGCCCTTCCTATAAAGTaGTTCGTATTTACACGCTGG +
Preference number: 4 (lower is better)
Translates to: QATISFSSWCWSSFHCRHALPIK*FVFTRW
Trigger: CCAGCGTGTAAATACGAATCACTTTATAGGAAGGGC...ATGCCTGCAGTGGAAGGATGACCAGCACCAAGAGGAAAAGGAAATGGTTGCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000338904.7
ENST00000404716.7
ENST00000429244.6
ENST00000553541.5
ENST00000553706.5
ENST00000554964.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
ENST00000611135.1
CDS-3UTR TCA 90 bp GCTGGTCATCCTTCCACTGCAGGCATCTGTATCCGTAACACATTCAAGGCATGCGCCCTTCCTATAAAGTaGTTCGTATTTACACGCTGG +
Preference number: 4 (lower is better)
Translates to: AGHPSTAGICIRNTFKACALPIK*FVFTRW
Trigger: CCAGCGTGTAAATACGAATCACTTTATAGGAAGGGC...GCATGCCTTGAATGTGTTACGGATACAGATGCCTGCAGTGGAAGGATGACCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000338904.7
ENST00000404716.7
ENST00000429244.6
ENST00000553541.5
ENST00000553706.5
ENST00000554964.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
ENST00000611135.1
CDS-3UTR TCA 90 bp ACATCTCAGAGCACCGTCTGTGAACCTAGCCTAAGGTGCTTTTGTGAGGTGTTGAGACACCATCCTCACTaGGGAAACTTCTGTGTTCAG +
Preference number: 4 (lower is better)
Translates to: TSQSTVCEPSLRCFCEVLRHHPH*GNFCVQ
Trigger: CTGAACACAGAAGTTTCCTCAGTGAGGATGGTGTCT...CAACACCTCACAAAAGCACCTTAGGCTAGGTTCACAGACGGTGCTCTGAGATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000338904.7
ENST00000404716.7
ENST00000429244.6
ENST00000553541.5
ENST00000553706.5
ENST00000554964.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
ENST00000611135.1
CDS-3UTR TCA 90 bp TTGGTGCTGGTCATCCTTCCACTGCAGGCATCTGTATCCGTAACACATTCAAGGAGACACCATCCTCACTaGGGAAACTTCTGTGTTCAG +
Preference number: 4 (lower is better)
Translates to: LVLVILPLQASVSVTHSRRHHPH*GNFCVQ
Trigger: CTGAACACAGAAGTTTCCTCAGTGAGGATGGTGTCT...CCTTGAATGTGTTACGGATACAGATGCCTGCAGTGGAAGGATGACCAGCACCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000338904.7
ENST00000404716.7
ENST00000429244.6
ENST00000553541.5
ENST00000553706.5
ENST00000554964.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
ENST00000611135.1
CDS-3UTR TCA 90 bp ACTAGAGAATCACATGGATGTGTCTTTGGAGCACACTTCAGGCAACCATTTCCTCTTAGGGGACCTGCATaGGACCACATCTCAGAGCAC +
Preference number: 4 (lower is better)
Translates to: TRESHGCVFGAHFRQPFPLRGPA*DHISEH
Trigger: GTGCTCTGAGATGTGGTCTCATGCAGGTCCCCTAAG...AGGAAATGGTTGCCTGAAGTGTGCTCCAAAGACACATCCATGTGATTCTCTAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000338904.7
ENST00000404716.7
ENST00000429244.6
ENST00000553541.5
ENST00000553706.5
ENST00000554964.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
ENST00000611135.1
CDS-3UTR TCA 90 bp CAGGCATCTGTATCCGTAACACATTCAAGGCATGCTAACTTAGGGGACCTGCATGCCTCTGCAACATCTTaGTCTGTGGAATGCAGGCTT +
Preference number: 4 (lower is better)
Translates to: QASVSVTHSRHANLGDLHASATS*SVECRL
Trigger: AAGCCTGCATTCCACAGATCAAGATGTTGCAGAGGC...ATGCAGGTCCCCTAAGTTAGCATGCCTTGAATGTGTTACGGATACAGATGCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000404716.7
ENST00000553706.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
CDS-3UTR TCA 90 bp TTGGTGCTGGTCATCCTTCCACTGCAGGCATCTGTATCCGTAACACATTCAAGGGTCTCTTCAAAAGAGTaGTCCCATGGTGACAGGTCA +
Preference number: 4 (lower is better)
Translates to: LVLVILPLQASVSVTHSRVSSKE*SHGDRS
Trigger: TGACCTGTCACCATGGGATCACTCTTTTGAAGAGAC...CCTTGAATGTGTTACGGATACAGATGCCTGCAGTGGAAGGATGACCAGCACCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000404716.7
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000611135.1
CDS-3UTR TCA 90 bp CTGCAGGCATCTGTATCCGTAACACATTCAAGGCATGCTAACTTAGGGGACCTGGTCTCTTCAAAAGAGTaGTCCCATGGTGACAGGTCA +
Preference number: 4 (lower is better)
Translates to: LQASVSVTHSRHANLGDLVSSKE*SHGDRS
Trigger: TGACCTGTCACCATGGGATCACTCTTTTGAAGAGAC...CAGGTCCCCTAAGTTAGCATGCCTTGAATGTGTTACGGATACAGATGCCTGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000404716.7
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000611135.1
CDS-3UTR TCA 90 bp TTGGTGCTGGTCATCCTTCCACTGCAGGCATCTGTATCCGTAACACATTCAAGGGCAGAAGCAACCTCCTaGGTTTTCTTACCTTACCAG +
Preference number: 4 (lower is better)
Translates to: LVLVILPLQASVSVTHSRAEATS*VFLPYQ
Trigger: CTGGTAAGGTAAGAAAACTCAGGAGGTTGCTTCTGC...CCTTGAATGTGTTACGGATACAGATGCCTGCAGTGGAAGGATGACCAGCACCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555230.5
ENST00000557068.5
CDS-3UTR GCA 90 bp TCTATAAGGATCAGTATGGAGAGAAATATTCCTCCCACCCTAAGCTCTCAGAGAACCAGCTGCAGCAGCTaGTGCGGCAATAGAAGCAGG +
Preference number: 4 (lower is better)
Translates to: SIRISMERNIPPTLSSQRTSCSS*CGNRSR
Trigger: CCTGCTTCTATTGCCGCAGCAGCTGCTGCAGCTGGT...TCTCTGAGAGCTTAGGGTGGGAGGAATATTTCTCTCCATACTGATCCTTATAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000338904.7
ENST00000404716.7
ENST00000429244.6
ENST00000553541.5
ENST00000553706.5
ENST00000554964.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
ENST00000611135.1
CDS-3UTR GCA 90 bp AGGCATGCTAACTTAGGGGACCTGCATGAGACCACATCTCAGAGCACCGTCTGTAAGGAAGTAATGTTCTaGCACCCAACGGTGTTTGTA +
Preference number: 4 (lower is better)
Translates to: RHANLGDLHETTSQSTVCKEVMF*HPTVFV
Trigger: TACAAACACCGTTGGGTGGCAGAACATTACTTCCTT...ACAGACGGTGCTCTGAGATGTGGTCTCATGCAGGTCCCCTAAGTTAGCATGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000338904.7
ENST00000404716.7
ENST00000429244.6
ENST00000553541.5
ENST00000553706.5
ENST00000554964.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
ENST00000611135.1
CDS-3UTR GCA 90 bp TTAGGGGACCTGCATGAGACCACATCTCAGAGCACCGTCTGTGAACCTAGCCTAAAGGAAGTAATGTTCTaGCACCCAACGGTGTTTGTA +
Preference number: 4 (lower is better)
Translates to: LGDLHETTSQSTVCEPSLKEVMF*HPTVFV
Trigger: TACAAACACCGTTGGGTGGCAGAACATTACTTCCTT...TAGGCTAGGTTCACAGACGGTGCTCTGAGATGTGGTCTCATGCAGGTCCCCTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000338904.7
ENST00000404716.7
ENST00000429244.6
ENST00000553541.5
ENST00000553706.5
ENST00000554964.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
ENST00000611135.1
CDS-3UTR GCA 90 bp CAGGCATCTGTATCCGTAACACATTCAAGGCATGCTAACTTAGGGGACCTGCATTCCTTTTCCTCTTGGTaGTGGTCATCCTTCCACTGC +
Preference number: 4 (lower is better)
Translates to: QASVSVTHSRHANLGDLHSFSSW*WSSFHC
Trigger: GCAGTGGAAGGATGACCAGCACCAAGAGGAAAAGGA...ATGCAGGTCCCCTAAGTTAGCATGCCTTGAATGTGTTACGGATACAGATGCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000338904.7
ENST00000404716.7
ENST00000429244.6
ENST00000553541.5
ENST00000553706.5
ENST00000554964.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
ENST00000611135.1
CDS-3UTR CCA 90 bp CAGGCATCTGTATCCGTAACACATTCAAGGCATGCTAACTTAGGGGACCTGCATTTTTCCTCTTGGTGCTaGTCATCCTTCCACTGCAGG +
Preference number: 4 (lower is better)
Translates to: QASVSVTHSRHANLGDLHFSSWC*SSFHCR
Trigger: CCTGCAGTGGAAGGATGACCAGCACCAAGAGGAAAA...ATGCAGGTCCCCTAAGTTAGCATGCCTTGAATGTGTTACGGATACAGATGCCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000338904.7
ENST00000404716.7
ENST00000429244.6
ENST00000553541.5
ENST00000553706.5
ENST00000554964.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
ENST00000611135.1
CDS-3UTR CCA 90 bp TCAGGCAACCATTTCCTTTTCCTCTTGGTGCTGGTCATCCTTCCACTGCAGGCAATTTCCTTTTCCTCTTaGTGCTGGTCATCCTTCCAC +
Preference number: 4 (lower is better)
Translates to: SGNHFLFLLVLVILPLQAISFSS*CWSSFH
Trigger: GTGGAAGGATGACCAGCACCAAGAGGAAAAGGAAAT...TGCCTGCAGTGGAAGGATGACCAGCACCAAGAGGAAAAGGAAATGGTTGCCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000338904.7
ENST00000404716.7
ENST00000429244.6
ENST00000553541.5
ENST00000553706.5
ENST00000554964.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
ENST00000611135.1
CDS-3UTR CCA 90 bp GAGACCACATCTCAGAGCACCGTCTGTGAACCTAGCCTAAGGTGCTTTTGTGAGATTTCCTTTTCCTCTTaGTGCTGGTCATCCTTCCAC +
Preference number: 4 (lower is better)
Translates to: ETTSQSTVCEPSLRCFCEISFSS*CWSSFH
Trigger: GTGGAAGGATGACCAGCACCAAGAGGAAAAGGAAAT...CTCACAAAAGCACCTTAGGCTAGGTTCACAGACGGTGCTCTGAGATGTGGTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000338904.7
ENST00000404716.7
ENST00000429244.6
ENST00000553541.5
ENST00000553706.5
ENST00000554964.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
ENST00000611135.1
CDS-3UTR CCA 90 bp GCTGGTCATCCTTCCACTGCAGGCATCTGTATCCGTAACACATTCAAGGCATGCATTTCCTTTTCCTCTTaGTGCTGGTCATCCTTCCAC +
Preference number: 4 (lower is better)
Translates to: AGHPSTAGICIRNTFKACISFSS*CWSSFH
Trigger: GTGGAAGGATGACCAGCACCAAGAGGAAAAGGAAAT...GCATGCCTTGAATGTGTTACGGATACAGATGCCTGCAGTGGAAGGATGACCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000338904.7
ENST00000404716.7
ENST00000429244.6
ENST00000553541.5
ENST00000553706.5
ENST00000554964.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
ENST00000611135.1
CDS-3UTR CCA 90 bp GCTGGTCATCCTTCCACTGCAGGCATCTGTATCCGTAACACATTCAAGGCATGCGGAATGCAGGCTTCTTaGTTTTTCCTCAGTTCTCAC +
Preference number: 4 (lower is better)
Translates to: AGHPSTAGICIRNTFKACGMQAS*FFLSSH
Trigger: GTGAGAACTGAGGAAAAACCAAGAAGCCTGCATTCC...GCATGCCTTGAATGTGTTACGGATACAGATGCCTGCAGTGGAAGGATGACCAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000404716.7
ENST00000553541.5
ENST00000553706.5
ENST00000554964.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
CDS-3UTR CCA 90 bp GAGACCACATCTCAGAGCACCGTCTGTGAACCTAGCCTAAGGTGCTTTTGTGAGGGAATGCAGGCTTCTTaGTTTTTCCTCAGTTCTCAC +
Preference number: 4 (lower is better)
Translates to: ETTSQSTVCEPSLRCFCEGMQAS*FFLSSH
Trigger: GTGAGAACTGAGGAAAAACCAAGAAGCCTGCATTCC...CTCACAAAAGCACCTTAGGCTAGGTTCACAGACGGTGCTCTGAGATGTGGTCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000404716.7
ENST00000553541.5
ENST00000553706.5
ENST00000554964.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
CDS-3UTR CCA 90 bp TCAGGCAACCATTTCCTTTTCCTCTTGGTGCTGGTCATCCTTCCACTGCAGGCAGGAATGCAGGCTTCTTaGTTTTTCCTCAGTTCTCAC +
Preference number: 4 (lower is better)
Translates to: SGNHFLFLLVLVILPLQAGMQAS*FFLSSH
Trigger: GTGAGAACTGAGGAAAAACCAAGAAGCCTGCATTCC...TGCCTGCAGTGGAAGGATGACCAGCACCAAGAGGAAAAGGAAATGGTTGCCTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000404716.7
ENST00000553541.5
ENST00000553706.5
ENST00000554964.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
CDS-3UTR TCA 90 bp TTGGTGCTGGTCATCCTTCCACTGCAGGCATCTGTATCCGTAACACATTCAAGGCAAGAGGCACTATGTTaGCTCACAGAAGTTGGAAGT +
Preference number: 4 (lower is better)
Translates to: LVLVILPLQASVSVTHSRQEALC*LTEVGS
Trigger: ACTTCCAACTTCTGTGAGTCAACATAGTGCCTCTTG...CCTTGAATGTGTTACGGATACAGATGCCTGCAGTGGAAGGATGACCAGCACCAA
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000338904.7
ENST00000404716.7
ENST00000429244.6
ENST00000553541.5
ENST00000553706.5
ENST00000554964.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
CDS-3UTR TCA 90 bp ACTAGAGAATCACATGGATGTGTCTTTGGAGCACACTTCAGGCAACCATTTCCTTCTGTATCCACCTCTTaGAACTGCACCAGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: TRESHGCVFGAHFRQPFPSVSTS*NCTSCS
Trigger: GCTGCAGCTGGTGCAGTTTCAAGAGGTGGATACAGA...AGGAAATGGTTGCCTGAAGTGTGCTCCAAAGACACATCCATGTGATTCTCTAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000338904.7
ENST00000404716.7
ENST00000429244.6
ENST00000553541.5
ENST00000553706.5
ENST00000554964.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
ENST00000611135.1
CDS-3UTR TCA 90 bp CTGCAGGCATCTGTATCCGTAACACATTCAAGGCATGCTAACTTAGGGGACCTGGCCCTTCCTATAAAGTaGTTCGTATTTACACGCTGG +
Preference number: 4 (lower is better)
Translates to: LQASVSVTHSRHANLGDLALPIK*FVFTRW
Trigger: CCAGCGTGTAAATACGAATCACTTTATAGGAAGGGC...CAGGTCCCCTAAGTTAGCATGCCTTGAATGTGTTACGGATACAGATGCCTGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000338904.7
ENST00000404716.7
ENST00000429244.6
ENST00000553541.5
ENST00000553706.5
ENST00000554964.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
ENST00000611135.1
CDS-3UTR TCA 90 bp CAGGCATCTGTATCCGTAACACATTCAAGGCATGCTAACTTAGGGGACCTGCATAGACACCATCCTCACTaGGGAAACTTCTGTGTTCAG +
Preference number: 4 (lower is better)
Translates to: QASVSVTHSRHANLGDLHRHHPH*GNFCVQ
Trigger: CTGAACACAGAAGTTTCCTCAGTGAGGATGGTGTCT...ATGCAGGTCCCCTAAGTTAGCATGCCTTGAATGTGTTACGGATACAGATGCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000338904.7
ENST00000404716.7
ENST00000429244.6
ENST00000553541.5
ENST00000553706.5
ENST00000554964.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
ENST00000611135.1
CDS-3UTR TCA 90 bp CAGGCATCTGTATCCGTAACACATTCAAGGCATGCTAACTTAGGGGACCTGCATGTCTCTTCAAAAGAGTaGTCCCATGGTGACAGGTCA +
Preference number: 4 (lower is better)
Translates to: QASVSVTHSRHANLGDLHVSSKE*SHGDRS
Trigger: TGACCTGTCACCATGGGATCACTCTTTTGAAGAGAC...ATGCAGGTCCCCTAAGTTAGCATGCCTTGAATGTGTTACGGATACAGATGCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000404716.7
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000611135.1
CDS-3UTR TCA 90 bp TTGGTGCTGGTCATCCTTCCACTGCAGGCATCTGTATCCGTAACACATTCAAGGTGGTGGCAACCTGAGTaGTTCTCTAACAGTCATTAC +
Preference number: 4 (lower is better)
Translates to: LVLVILPLQASVSVTHSRWWQPE*FSNSHY
Trigger: GTAATGACTGTTAGAGAATCACTCAGGTTGCCACCA...CCTTGAATGTGTTACGGATACAGATGCCTGCAGTGGAAGGATGACCAGCACCAA
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555230.5
ENST00000557068.5
CDS-3UTR TCA 90 bp TCAGGCAACCATTTCCTTTTCCTCTTGGTGCTGGTCATCCTTCCACTGCAGGCAAGGAAGGTTCAAGTTTaGGCAGCTGGGATAAATACA +
Preference number: 4 (lower is better)
Translates to: SGNHFLFLLVLVILPLQARKVQV*AAGINT
Trigger: TGTATTTATCCCAGCTGCTCAAACTTGAACCTTCCT...TGCCTGCAGTGGAAGGATGACCAGCACCAAGAGGAAAAGGAAATGGTTGCCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555230.5
ENST00000557068.5
CDS-3UTR TCA 90 bp TTGGTGCTGGTCATCCTTCCACTGCAGGCATCTGTATCCGTAACACATTCAAGGTCCCTTTCCAGGAGTTaGGAACTTGCTCTGAAAAGA +
Preference number: 4 (lower is better)
Translates to: LVLVILPLQASVSVTHSRSLSRS*ELALKR
Trigger: TCTTTTCAGAGCAAGTTCTCAACTCCTGGAAAGGGA...CCTTGAATGTGTTACGGATACAGATGCCTGCAGTGGAAGGATGACCAGCACCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555230.5
ENST00000557068.5
CDS-3UTR GCA 90 bp GCTGGTCATCCTTCCACTGCAGGCATCTGTATCCGTAACACATTCAAGGCATGCAAGGAAGTAATGTTCTaGCACCCAACGGTGTTTGTA +
Preference number: 4 (lower is better)
Translates to: AGHPSTAGICIRNTFKACKEVMF*HPTVFV
Trigger: TACAAACACCGTTGGGTGGCAGAACATTACTTCCTT...GCATGCCTTGAATGTGTTACGGATACAGATGCCTGCAGTGGAAGGATGACCAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000338904.7
ENST00000404716.7
ENST00000429244.6
ENST00000553541.5
ENST00000553706.5
ENST00000554964.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
ENST00000611135.1
CDS-3UTR GCA 90 bp CAGGCATCTGTATCCGTAACACATTCAAGGCATGCTAACTTAGGGGACCTGCATGAACCTAGCCTAAGGTaGTTTTGTGAGGTGTTGGGA +
Preference number: 4 (lower is better)
Translates to: QASVSVTHSRHANLGDLHEPSLR*FCEVLG
Trigger: TCCCAACACCTCACAAAAGCACCTTAGGCTAGGTTC...ATGCAGGTCCCCTAAGTTAGCATGCCTTGAATGTGTTACGGATACAGATGCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000338904.7
ENST00000404716.7
ENST00000429244.6
ENST00000553541.5
ENST00000553706.5
ENST00000554964.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
ENST00000611135.1
CDS-3UTR GCA 90 bp AGGCATGCTAACTTAGGGGACCTGCATGAGACCACATCTCAGAGCACCGTCTGTTCTCATCATTTTTCCTaGAGACATGTCATCAGTGTC +
Preference number: 4 (lower is better)
Translates to: RHANLGDLHETTSQSTVCSHHFS*RHVISV
Trigger: GACACTGATGACATGTCTGCAGGAAAAATGATGAGA...ACAGACGGTGCTCTGAGATGTGGTCTCATGCAGGTCCCCTAAGTTAGCATGCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000404716.7
ENST00000556208.5
ENST00000611135.1
CDS-3UTR GCA 90 bp CAGGCAACCATTTCCTTTTCCTCTTGGTGCTGGTCATCCTTCCACTGCAGGCATACATCTGTCCTTAGCTaGTATTCTATGGCCTCTATC +
Preference number: 4 (lower is better)
Translates to: QATISFSSWCWSSFHCRHTSVLS*YSMASI
Trigger: GATAGAGGCCATAGAATAGCAGCTAAGGACAGATGT...ATGCCTGCAGTGGAAGGATGACCAGCACCAAGAGGAAAAGGAAATGGTTGCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555230.5
ENST00000557068.5
CDS-3UTR GCA 90 bp CTGCAGGCATCTGTATCCGTAACACATTCAAGGCATGCTAACTTAGGGGACCTGTTATTTGACCATAGATaGCCTTGGGGAAGGGGTCAA +
Preference number: 4 (lower is better)
Translates to: LQASVSVTHSRHANLGDLLFDHR*PWGRGQ
Trigger: TTGACCCCTTCCCCAAGGGCATCTATGGTCAAATAA...CAGGTCCCCTAAGTTAGCATGCCTTGAATGTGTTACGGATACAGATGCCTGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000555230.5
ENST00000557068.5
CDS-3UTR CCA 90 bp CAGGCAACCATTTCCTTTTCCTCTTGGTGCTGGTCATCCTTCCACTGCAGGCATACTTCTGTGTTCAGGTaGCTCCACGAGATCATTTAT +
Preference number: 4 (lower is better)
Translates to: QATISFSSWCWSSFHCRHTSVFR*LHEIIY
Trigger: ATAAATGATCTCGTGGAGCCACCTGAACACAGAAGT...ATGCCTGCAGTGGAAGGATGACCAGCACCAAGAGGAAAAGGAAATGGTTGCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000338904.7
ENST00000404716.7
ENST00000429244.6
ENST00000553541.5
ENST00000553706.5
ENST00000554964.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
ENST00000611135.1
CDS-3UTR CCA 90 bp TCAGGCAACCATTTCCTTTTCCTCTTGGTGCTGGTCATCCTTCCACTGCAGGCAACTTCTGTGTTCAGGTaGCTCCACGAGATCATTTAT +
Preference number: 4 (lower is better)
Translates to: SGNHFLFLLVLVILPLQATSVFR*LHEIIY
Trigger: ATAAATGATCTCGTGGAGCCACCTGAACACAGAAGT...TGCCTGCAGTGGAAGGATGACCAGCACCAAGAGGAAAAGGAAATGGTTGCCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000338904.7
ENST00000404716.7
ENST00000429244.6
ENST00000553541.5
ENST00000553706.5
ENST00000554964.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
ENST00000611135.1
CDS-3UTR CCA 90 bp GCTGGTCATCCTTCCACTGCAGGCATCTGTATCCGTAACACATTCAAGGCATGCACTTCTGTGTTCAGGTaGCTCCACGAGATCATTTAT +
Preference number: 4 (lower is better)
Translates to: AGHPSTAGICIRNTFKACTSVFR*LHEIIY
Trigger: ATAAATGATCTCGTGGAGCCACCTGAACACAGAAGT...GCATGCCTTGAATGTGTTACGGATACAGATGCCTGCAGTGGAAGGATGACCAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000338904.7
ENST00000404716.7
ENST00000429244.6
ENST00000553541.5
ENST00000553706.5
ENST00000554964.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
ENST00000611135.1
CDS-3UTR CCA 90 bp GAGACCACATCTCAGAGCACCGTCTGTGAACCTAGCCTAAGGTGCTTTTGTGAGACTTCTGTGTTCAGGTaGCTCCACGAGATCATTTAT +
Preference number: 4 (lower is better)
Translates to: ETTSQSTVCEPSLRCFCETSVFR*LHEIIY
Trigger: ATAAATGATCTCGTGGAGCCACCTGAACACAGAAGT...CTCACAAAAGCACCTTAGGCTAGGTTCACAGACGGTGCTCTGAGATGTGGTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000338904.7
ENST00000404716.7
ENST00000429244.6
ENST00000553541.5
ENST00000553706.5
ENST00000554964.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
ENST00000611135.1
CDS-3UTR CCA 90 bp CTGCAGGCATCTGTATCCGTAACACATTCAAGGCATGCTAACTTAGGGGACCTGGGAATGCAGGCTTCTTaGTTTTTCCTCAGTTCTCAC +
Preference number: 4 (lower is better)
Translates to: LQASVSVTHSRHANLGDLGMQAS*FFLSSH
Trigger: GTGAGAACTGAGGAAAAACCAAGAAGCCTGCATTCC...CAGGTCCCCTAAGTTAGCATGCCTTGAATGTGTTACGGATACAGATGCCTGCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000404716.7
ENST00000553541.5
ENST00000553706.5
ENST00000554964.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
CDS-3UTR CCA 90 bp GAGACCACATCTCAGAGCACCGTCTGTGAACCTAGCCTAAGGTGCTTTTGTGAGCAACATCTTGATCTGTaGAATGCAGGCTTCTTGGTT +
Preference number: 4 (lower is better)
Translates to: ETTSQSTVCEPSLRCFCEQHLDL*NAGFLV
Trigger: AACCAAGAAGCCTGCATTCCACAGATCAAGATGTTG...CTCACAAAAGCACCTTAGGCTAGGTTCACAGACGGTGCTCTGAGATGTGGTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000404716.7
ENST00000553706.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
CDS-3UTR CCA 90 bp TCAGGCAACCATTTCCTTTTCCTCTTGGTGCTGGTCATCCTTCCACTGCAGGCAAAAAGTTGCCTAAAATaGCGATGTGAGAATGGGCAC +
Preference number: 4 (lower is better)
Translates to: SGNHFLFLLVLVILPLQAKSCLK*RCENGH
Trigger: GTGCCCATTCTCACATCGCCATTTTAGGCAACTTTT...TGCCTGCAGTGGAAGGATGACCAGCACCAAGAGGAAAAGGAAATGGTTGCCTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000555230.5
ENST00000557068.5
CDS-3UTR CCA 90 bp AGGCATGCTAACTTAGGGGACCTGCATGAGACCACATCTCAGAGCACCGTCTGTTTAGCTGCTATTCTATaGCCTCTATCAGTCTGGTTT +
Preference number: 4 (lower is better)
Translates to: RHANLGDLHETTSQSTVCLAAIL*PLSVWF
Trigger: AAACCAGACTGATAGAGGCCATAGAATAGCAGCTAA...ACAGACGGTGCTCTGAGATGTGGTCTCATGCAGGTCCCCTAAGTTAGCATGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555230.5
ENST00000557068.5
CDS-3UTR TCA 90 bp TCTATAAGGATCAGTATGGAGAGAAATATTCCTCCCACCCTAAGCTCTCAGAGATCTGTATCCACCTCTTaGAACTGCACCAGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: SIRISMERNIPPTLSSQRSVSTS*NCTSCS
Trigger: GCTGCAGCTGGTGCAGTTTCAAGAGGTGGATACAGA...TCTCTGAGAGCTTAGGGTGGGAGGAATATTTCTCTCCATACTGATCCTTATAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000338904.7
ENST00000404716.7
ENST00000429244.6
ENST00000553541.5
ENST00000553706.5
ENST00000554964.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
ENST00000611135.1
CDS-3UTR TCA 90 bp TTAGGGGACCTGCATGAGACCACATCTCAGAGCACCGTCTGTGAACCTAGCCTATTACAGTACTCTATATaGTTTAGTGGCATTCCAGGT +
Preference number: 4 (lower is better)
Translates to: LGDLHETTSQSTVCEPSLLQYSI*FSGIPG
Trigger: ACCTGGAATGCCACTAAATCATATAGAGTACTGTAA...TAGGCTAGGTTCACAGACGGTGCTCTGAGATGTGGTCTCATGCAGGTCCCCTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000338904.7
ENST00000404716.7
ENST00000429244.6
ENST00000553541.5
ENST00000553706.5
ENST00000554964.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
ENST00000611135.1
CDS-3UTR TCA 90 bp CAGGCATCTGTATCCGTAACACATTCAAGGCATGCTAACTTAGGGGACCTGCATGCCCTTCCTATAAAGTaGTTCGTATTTACACGCTGG +
Preference number: 4 (lower is better)
Translates to: QASVSVTHSRHANLGDLHALPIK*FVFTRW
Trigger: CCAGCGTGTAAATACGAATCACTTTATAGGAAGGGC...ATGCAGGTCCCCTAAGTTAGCATGCCTTGAATGTGTTACGGATACAGATGCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000338904.7
ENST00000404716.7
ENST00000429244.6
ENST00000553541.5
ENST00000553706.5
ENST00000554964.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
ENST00000611135.1
CDS-3UTR TCA 90 bp ACATCTCAGAGCACCGTCTGTGAACCTAGCCTAAGGTGCTTTTGTGAGGTGTTGATTACCTGGAGACCTTaGTCTATCAGTGATGGAGAT +
Preference number: 4 (lower is better)
Translates to: TSQSTVCEPSLRCFCEVLITWRP*SISDGD
Trigger: ATCTCCATCACTGATAGATCAAGGTCTCCAGGTAAT...CAACACCTCACAAAAGCACCTTAGGCTAGGTTCACAGACGGTGCTCTGAGATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555230.5
ENST00000557068.5
CDS-3UTR TCA 90 bp TCTATAAGGATCAGTATGGAGAGAAATATTCCTCCCACCCTAAGCTCTCAGAGAGCCCCTAGAGTGCTTTaGCAAATTGGTCCATGCTCC +
Preference number: 4 (lower is better)
Translates to: SIRISMERNIPPTLSSQRAPRVL*QIGPCS
Trigger: GGAGCATGGACCAATTTGTCAAAGCACTCTAGGGGC...TCTCTGAGAGCTTAGGGTGGGAGGAATATTTCTCTCCATACTGATCCTTATAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555230.5
ENST00000557068.5
CDS-3UTR GCA 90 bp ACATCTCAGAGCACCGTCTGTGAACCTAGCCTAAGGTGCTTTTGTGAGGTGTTGAAGGAAGTAATGTTCTaGCACCCAACGGTGTTTGTA +
Preference number: 4 (lower is better)
Translates to: TSQSTVCEPSLRCFCEVLKEVMF*HPTVFV
Trigger: TACAAACACCGTTGGGTGGCAGAACATTACTTCCTT...CAACACCTCACAAAAGCACCTTAGGCTAGGTTCACAGACGGTGCTCTGAGATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000338904.7
ENST00000404716.7
ENST00000429244.6
ENST00000553541.5
ENST00000553706.5
ENST00000554964.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
ENST00000611135.1
CDS-3UTR GCA 90 bp TTGGTGCTGGTCATCCTTCCACTGCAGGCATCTGTATCCGTAACACATTCAAGGAAGGAAGTAATGTTCTaGCACCCAACGGTGTTTGTA +
Preference number: 4 (lower is better)
Translates to: LVLVILPLQASVSVTHSRKEVMF*HPTVFV
Trigger: TACAAACACCGTTGGGTGGCAGAACATTACTTCCTT...CCTTGAATGTGTTACGGATACAGATGCCTGCAGTGGAAGGATGACCAGCACCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000338904.7
ENST00000404716.7
ENST00000429244.6
ENST00000553541.5
ENST00000553706.5
ENST00000554964.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
ENST00000611135.1
CDS-3UTR GCA 90 bp AGGCATGCTAACTTAGGGGACCTGCATGAGACCACATCTCAGAGCACCGTCTGTGAGATGTTTCTTAAATaGAAGAGGCACTATGTTGAC +
Preference number: 4 (lower is better)
Translates to: RHANLGDLHETTSQSTVCEMFLK*KRHYVD
Trigger: GTCAACATAGTGCCTCTTGCATTTAAGAAACATCTC...ACAGACGGTGCTCTGAGATGTGGTCTCATGCAGGTCCCCTAAGTTAGCATGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000404716.7
ENST00000429244.6
ENST00000553541.5
ENST00000553706.5
ENST00000557068.5
CDS-3UTR GCA 90 bp CTGCAGGCATCTGTATCCGTAACACATTCAAGGCATGCTAACTTAGGGGACCTGTCTCATCATTTTTCCTaGAGACACTGTGGAATGCAG +
Preference number: 4 (lower is better)
Translates to: LQASVSVTHSRHANLGDLSHHFS*RHCGMQ
Trigger: CTGCATTCCACAGTGTCTGCAGGAAAAATGATGAGA...CAGGTCCCCTAAGTTAGCATGCCTTGAATGTGTTACGGATACAGATGCCTGCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000553541.5
ENST00000554964.5
CDS-3UTR GCA 90 bp ACATCTCAGAGCACCGTCTGTGAACCTAGCCTAAGGTGCTTTTGTGAGGTGTTGTTTGAGCCCCTAGAGTaGTTTGACAAATTGGTCCAT +
Preference number: 4 (lower is better)
Translates to: TSQSTVCEPSLRCFCEVLFEPLE*FDKLVH
Trigger: ATGGACCAATTTGTCAAAGCACTCTAGGGGCTCAAA...CAACACCTCACAAAAGCACCTTAGGCTAGGTTCACAGACGGTGCTCTGAGATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000555230.5
ENST00000557068.5
CDS-3UTR CCA 90 bp ACATCTCAGAGCACCGTCTGTGAACCTAGCCTAAGGTGCTTTTGTGAGGTGTTGACTTCTGTGTTCAGGTaGCTCCACGAGATCATTTAT +
Preference number: 4 (lower is better)
Translates to: TSQSTVCEPSLRCFCEVLTSVFR*LHEIIY
Trigger: ATAAATGATCTCGTGGAGCCACCTGAACACAGAAGT...CAACACCTCACAAAAGCACCTTAGGCTAGGTTCACAGACGGTGCTCTGAGATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000338904.7
ENST00000404716.7
ENST00000429244.6
ENST00000553541.5
ENST00000553706.5
ENST00000554964.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
ENST00000611135.1
CDS-3UTR CCA 90 bp ACTAGAGAATCACATGGATGTGTCTTTGGAGCACACTTCAGGCAACCATTTCCTTTTTCCTCTTGGTGCTaGTCATCCTTCCACTGCAGG +
Preference number: 4 (lower is better)
Translates to: TRESHGCVFGAHFRQPFPFSSWC*SSFHCR
Trigger: CCTGCAGTGGAAGGATGACCAGCACCAAGAGGAAAA...AGGAAATGGTTGCCTGAAGTGTGCTCCAAAGACACATCCATGTGATTCTCTAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000338904.7
ENST00000404716.7
ENST00000429244.6
ENST00000553541.5
ENST00000553706.5
ENST00000554964.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
ENST00000611135.1
CDS-3UTR CCA 90 bp CAGGCATCTGTATCCGTAACACATTCAAGGCATGCTAACTTAGGGGACCTGCATATTTCCTTTTCCTCTTaGTGCTGGTCATCCTTCCAC +
Preference number: 4 (lower is better)
Translates to: QASVSVTHSRHANLGDLHISFSS*CWSSFH
Trigger: GTGGAAGGATGACCAGCACCAAGAGGAAAAGGAAAT...ATGCAGGTCCCCTAAGTTAGCATGCCTTGAATGTGTTACGGATACAGATGCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000338904.7
ENST00000404716.7
ENST00000429244.6
ENST00000553541.5
ENST00000553706.5
ENST00000554964.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
ENST00000611135.1
CDS-3UTR CCA 90 bp CAGGCATCTGTATCCGTAACACATTCAAGGCATGCTAACTTAGGGGACCTGCATGGAATGCAGGCTTCTTaGTTTTTCCTCAGTTCTCAC +
Preference number: 4 (lower is better)
Translates to: QASVSVTHSRHANLGDLHGMQAS*FFLSSH
Trigger: GTGAGAACTGAGGAAAAACCAAGAAGCCTGCATTCC...ATGCAGGTCCCCTAAGTTAGCATGCCTTGAATGTGTTACGGATACAGATGCCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000404716.7
ENST00000553541.5
ENST00000553706.5
ENST00000554964.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
CDS-3UTR CCA 90 bp ACATCTCAGAGCACCGTCTGTGAACCTAGCCTAAGGTGCTTTTGTGAGGTGTTGCAACATCTTGATCTGTaGAATGCAGGCTTCTTGGTT +
Preference number: 4 (lower is better)
Translates to: TSQSTVCEPSLRCFCEVLQHLDL*NAGFLV
Trigger: AACCAAGAAGCCTGCATTCCACAGATCAAGATGTTG...CAACACCTCACAAAAGCACCTTAGGCTAGGTTCACAGACGGTGCTCTGAGATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000404716.7
ENST00000553706.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
CDS-3UTR CCA 90 bp TTAGGGGACCTGCATGAGACCACATCTCAGAGCACCGTCTGTGAACCTAGCCTACCTCCTGTTCTAGGCTaGATACTAAGTTTGTATATA +
Preference number: 4 (lower is better)
Translates to: LGDLHETTSQSTVCEPSLPPVLG*ILSLYI
Trigger: TATATACAAACTTAGTATCCAGCCTAGAACAGGAGG...TAGGCTAGGTTCACAGACGGTGCTCTGAGATGTGGTCTCATGCAGGTCCCCTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555230.5
ENST00000557068.5
CDS-3UTR TCA 90 bp TCAGGCAACCATTTCCTTTTCCTCTTGGTGCTGGTCATCCTTCCACTGCAGGCATTACAGTACTCTATATaGTTTAGTGGCATTCCAGGT +
Preference number: 4 (lower is better)
Translates to: SGNHFLFLLVLVILPLQALQYSI*FSGIPG
Trigger: ACCTGGAATGCCACTAAATCATATAGAGTACTGTAA...TGCCTGCAGTGGAAGGATGACCAGCACCAAGAGGAAAAGGAAATGGTTGCCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000338904.7
ENST00000404716.7
ENST00000429244.6
ENST00000553541.5
ENST00000553706.5
ENST00000554964.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
ENST00000611135.1
CDS-3UTR TCA 90 bp ACTAGAGAATCACATGGATGTGTCTTTGGAGCACACTTCAGGCAACCATTTCCTAGACACCATCCTCACTaGGGAAACTTCTGTGTTCAG +
Preference number: 4 (lower is better)
Translates to: TRESHGCVFGAHFRQPFPRHHPH*GNFCVQ
Trigger: CTGAACACAGAAGTTTCCTCAGTGAGGATGGTGTCT...AGGAAATGGTTGCCTGAAGTGTGCTCCAAAGACACATCCATGTGATTCTCTAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000338904.7
ENST00000404716.7
ENST00000429244.6
ENST00000553541.5
ENST00000553706.5
ENST00000554964.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
ENST00000611135.1
CDS-3UTR TCA 90 bp ACTAGAGAATCACATGGATGTGTCTTTGGAGCACACTTCAGGCAACCATTTCCTCCTAAGGTGCTTTTGTaGGGTGTTGGGAAAGGAAGA +
Preference number: 4 (lower is better)
Translates to: TRESHGCVFGAHFRQPFPPKVLL*GVGKGR
Trigger: TCTTCCTTTCCCAACACCTCACAAAAGCACCTTAGG...AGGAAATGGTTGCCTGAAGTGTGCTCCAAAGACACATCCATGTGATTCTCTAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000338904.7
ENST00000404716.7
ENST00000429244.6
ENST00000553541.5
ENST00000553706.5
ENST00000554964.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
ENST00000611135.1
CDS-3UTR TCA 90 bp TTCTCAACTTTGATCTATAAGGATCAGTATGGAGAGAAATATTCCTCCCACCCTCTTAGGGGACCTGCATaGGACCACATCTCAGAGCAC +
Preference number: 4 (lower is better)
Translates to: FSTLIYKDQYGEKYSSHPLRGPA*DHISEH
Trigger: GTGCTCTGAGATGTGGTCTCATGCAGGTCCCCTAAG...AGGGTGGGAGGAATATTTCTCTCCATACTGATCCTTATAGATCAAAGTTGAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000338904.7
ENST00000404716.7
ENST00000429244.6
ENST00000553541.5
ENST00000553706.5
ENST00000554964.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
ENST00000611135.1
CDS-3UTR TCA 90 bp TTCTCAACTTTGATCTATAAGGATCAGTATGGAGAGAAATATTCCTCCCACCCTAGAGTGATCCCATGGTaGCAGGTCAGAGAGCTCGGA +
Preference number: 4 (lower is better)
Translates to: FSTLIYKDQYGEKYSSHPRVIPW*QVRELG
Trigger: TCCGAGCTCTCTGACCTGTCACCATGGGATCACTCT...AGGGTGGGAGGAATATTTCTCTCCATACTGATCCTTATAGATCAAAGTTGAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000404716.7
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000611135.1
CDS-3UTR TCA 90 bp TCTATAAGGATCAGTATGGAGAGAAATATTCCTCCCACCCTAAGCTCTCAGAGAACCTTGATCTATCAGTaGTGGAGATGGACAGCCTCC +
Preference number: 4 (lower is better)
Translates to: SIRISMERNIPPTLSSQRTLIYQ*WRWTAS
Trigger: GGAGGCTGTCCATCTCCATCACTGATAGATCAAGGT...TCTCTGAGAGCTTAGGGTGGGAGGAATATTTCTCTCCATACTGATCCTTATAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555230.5
ENST00000557068.5
CDS-3UTR GCA 90 bp ATTTTTATTCTTTCTGCTGAACTAGAGAATCACATGGATGTGTCTTTGGAGCACACCAGCTGCAGCAGCTaGTGCGGCAATAGAAGCAGG +
Preference number: 4 (lower is better)
Translates to: IFILSAELENHMDVSLEHTSCSS*CGNRSR
Trigger: CCTGCTTCTATTGCCGCAGCAGCTGCTGCAGCTGGT...GTGCTCCAAAGACACATCCATGTGATTCTCTAGTTCAGCAGAAAGAATAAAAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000338904.7
ENST00000404716.7
ENST00000429244.6
ENST00000553541.5
ENST00000553706.5
ENST00000554964.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
ENST00000611135.1
CDS-3UTR GCA 90 bp CAGGCATCTGTATCCGTAACACATTCAAGGCATGCTAACTTAGGGGACCTGCATAAGGAAGTAATGTTCTaGCACCCAACGGTGTTTGTA +
Preference number: 4 (lower is better)
Translates to: QASVSVTHSRHANLGDLHKEVMF*HPTVFV
Trigger: TACAAACACCGTTGGGTGGCAGAACATTACTTCCTT...ATGCAGGTCCCCTAAGTTAGCATGCCTTGAATGTGTTACGGATACAGATGCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000338904.7
ENST00000404716.7
ENST00000429244.6
ENST00000553541.5
ENST00000553706.5
ENST00000554964.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
ENST00000611135.1
CDS-3UTR GCA 90 bp ACTAGAGAATCACATGGATGTGTCTTTGGAGCACACTTCAGGCAACCATTTCCTGAACCTAGCCTAAGGTaGTTTTGTGAGGTGTTGGGA +
Preference number: 4 (lower is better)
Translates to: TRESHGCVFGAHFRQPFPEPSLR*FCEVLG
Trigger: TCCCAACACCTCACAAAAGCACCTTAGGCTAGGTTC...AGGAAATGGTTGCCTGAAGTGTGCTCCAAAGACACATCCATGTGATTCTCTAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000338904.7
ENST00000404716.7
ENST00000429244.6
ENST00000553541.5
ENST00000553706.5
ENST00000554964.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
ENST00000611135.1
CDS-3UTR GCA 90 bp TCTATAAGGATCAGTATGGAGAGAAATATTCCTCCCACCCTAAGCTCTCAGAGAAGAACGCGGAGCCTCTaGAACATCTTGATCTGTGGA +
Preference number: 4 (lower is better)
Translates to: SIRISMERNIPPTLSSQRRTRSL*NILICG
Trigger: TCCACAGATCAAGATGTTGCAGAGGCTCCGCGTTCT...TCTCTGAGAGCTTAGGGTGGGAGGAATATTTCTCTCCATACTGATCCTTATAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000404716.7
ENST00000553706.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
CDS-3UTR GCA 90 bp TTGGTGCTGGTCATCCTTCCACTGCAGGCATCTGTATCCGTAACACATTCAAGGTCTCATCATTTTTCCTaGAGACATGTCATCAGTGTC +
Preference number: 4 (lower is better)
Translates to: LVLVILPLQASVSVTHSRSHHFS*RHVISV
Trigger: GACACTGATGACATGTCTGCAGGAAAAATGATGAGA...CCTTGAATGTGTTACGGATACAGATGCCTGCAGTGGAAGGATGACCAGCACCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000404716.7
ENST00000556208.5
ENST00000611135.1
CDS-3UTR GCA 90 bp ACTAGAGAATCACATGGATGTGTCTTTGGAGCACACTTCAGGCAACCATTTCCTGCAGACACTGTGGAATaGAGGCTTCTTGGTTTTTCC +
Preference number: 4 (lower is better)
Translates to: TRESHGCVFGAHFRQPFPADTVE*RLLGFS
Trigger: GGAAAAACCAAGAAGCCTGCATTCCACAGTGTCTGC...AGGAAATGGTTGCCTGAAGTGTGCTCCAAAGACACATCCATGTGATTCTCTAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000553541.5
ENST00000554964.5
CDS-3UTR GCA 90 bp TCAGGCAACCATTTCCTTTTCCTCTTGGTGCTGGTCATCCTTCCACTGCAGGCATCCGTGAAGGGAAGTTaGTTAAAATCTCACATTAGA +
Preference number: 4 (lower is better)
Translates to: SGNHFLFLLVLVILPLQASVKGS*LKSHIR
Trigger: TCTAATGTGAGATTTTAAGCAACTTCCCTTCACGGA...TGCCTGCAGTGGAAGGATGACCAGCACCAAGAGGAAAAGGAAATGGTTGCCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000555230.5
ENST00000557068.5
CDS-3UTR CCA 90 bp TTAGGGGACCTGCATGAGACCACATCTCAGAGCACCGTCTGTGAACCTAGCCTATTCGTATTTACACGCTaGTATTTCAAATGCTTCTGT +
Preference number: 4 (lower is better)
Translates to: LGDLHETTSQSTVCEPSLFVFTR*YFKCFC
Trigger: ACAGAAGCATTTGAAATACCAGCGTGTAAATACGAA...TAGGCTAGGTTCACAGACGGTGCTCTGAGATGTGGTCTCATGCAGGTCCCCTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000338904.7
ENST00000404716.7
ENST00000429244.6
ENST00000553541.5
ENST00000553706.5
ENST00000554964.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
ENST00000611135.1
CDS-3UTR CCA 90 bp TCTATAAGGATCAGTATGGAGAGAAATATTCCTCCCACCCTAAGCTCTCAGAGATTTTCCTCTTGGTGCTaGTCATCCTTCCACTGCAGG +
Preference number: 4 (lower is better)
Translates to: SIRISMERNIPPTLSSQRFSSWC*SSFHCR
Trigger: CCTGCAGTGGAAGGATGACCAGCACCAAGAGGAAAA...TCTCTGAGAGCTTAGGGTGGGAGGAATATTTCTCTCCATACTGATCCTTATAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000338904.7
ENST00000404716.7
ENST00000429244.6
ENST00000553541.5
ENST00000553706.5
ENST00000554964.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
ENST00000611135.1
CDS-3UTR TCA 90 bp ACATCTCAGAGCACCGTCTGTGAACCTAGCCTAAGGTGCTTTTGTGAGGTGTTGTTACAGTACTCTATATaGTTTAGTGGCATTCCAGGT +
Preference number: 4 (lower is better)
Translates to: TSQSTVCEPSLRCFCEVLLQYSI*FSGIPG
Trigger: ACCTGGAATGCCACTAAATCATATAGAGTACTGTAA...CAACACCTCACAAAAGCACCTTAGGCTAGGTTCACAGACGGTGCTCTGAGATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000338904.7
ENST00000404716.7
ENST00000429244.6
ENST00000553541.5
ENST00000553706.5
ENST00000554964.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
ENST00000611135.1
CDS-3UTR TCA 90 bp CTGCAGGCATCTGTATCCGTAACACATTCAAGGCATGCTAACTTAGGGGACCTGTTACAGTACTCTATATaGTTTAGTGGCATTCCAGGT +
Preference number: 4 (lower is better)
Translates to: LQASVSVTHSRHANLGDLLQYSI*FSGIPG
Trigger: ACCTGGAATGCCACTAAATCATATAGAGTACTGTAA...CAGGTCCCCTAAGTTAGCATGCCTTGAATGTGTTACGGATACAGATGCCTGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000338904.7
ENST00000404716.7
ENST00000429244.6
ENST00000553541.5
ENST00000553706.5
ENST00000554964.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
ENST00000611135.1
CDS-3UTR TCA 90 bp TCTATAAGGATCAGTATGGAGAGAAATATTCCTCCCACCCTAAGCTCTCAGAGACCTAAGGTGCTTTTGTaGGGTGTTGGGAAAGGAAGA +
Preference number: 4 (lower is better)
Translates to: SIRISMERNIPPTLSSQRPKVLL*GVGKGR
Trigger: TCTTCCTTTCCCAACACCTCACAAAAGCACCTTAGG...TCTCTGAGAGCTTAGGGTGGGAGGAATATTTCTCTCCATACTGATCCTTATAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000338904.7
ENST00000404716.7
ENST00000429244.6
ENST00000553541.5
ENST00000553706.5
ENST00000554964.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
ENST00000611135.1
CDS-3UTR TCA 90 bp ATTTTTATTCTTTCTGCTGAACTAGAGAATCACATGGATGTGTCTTTGGAGCACCTTAGGGGACCTGCATaGGACCACATCTCAGAGCAC +
Preference number: 4 (lower is better)
Translates to: IFILSAELENHMDVSLEHLRGPA*DHISEH
Trigger: GTGCTCTGAGATGTGGTCTCATGCAGGTCCCCTAAG...GTGCTCCAAAGACACATCCATGTGATTCTCTAGTTCAGCAGAAAGAATAAAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000338904.7
ENST00000404716.7
ENST00000429244.6
ENST00000553541.5
ENST00000553706.5
ENST00000554964.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
ENST00000611135.1
CDS-3UTR TCA 90 bp ATTTTTATTCTTTCTGCTGAACTAGAGAATCACATGGATGTGTCTTTGGAGCACAGAGTGATCCCATGGTaGCAGGTCAGAGAGCTCGGA +
Preference number: 4 (lower is better)
Translates to: IFILSAELENHMDVSLEHRVIPW*QVRELG
Trigger: TCCGAGCTCTCTGACCTGTCACCATGGGATCACTCT...GTGCTCCAAAGACACATCCATGTGATTCTCTAGTTCAGCAGAAAGAATAAAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000404716.7
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000611135.1
CDS-3UTR TCA 90 bp TTCTCAACTTTGATCTATAAGGATCAGTATGGAGAGAAATATTCCTCCCACCCTGTTGAGAACTTGCTCTaGAAAGAGCCACCCTCCCCT +
Preference number: 4 (lower is better)
Translates to: FSTLIYKDQYGEKYSSHPVENLL*KEPPSP
Trigger: AGGGGAGGGTGGCTCTTTTCAGAGCAAGTTCTCAAC...AGGGTGGGAGGAATATTTCTCTCCATACTGATCCTTATAGATCAAAGTTGAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555230.5
ENST00000557068.5
CDS-3UTR GCA 90 bp TCTATAAGGATCAGTATGGAGAGAAATATTCCTCCCACCCTAAGCTCTCAGAGACAGGAGTTGAGAACTTaGTCTGAAAAGAGCCACCCT +
Preference number: 4 (lower is better)
Translates to: SIRISMERNIPPTLSSQRQELRT*SEKSHP
Trigger: AGGGTGGCTCTTTTCAGAGCAAGTTCTCAACTCCTG...TCTCTGAGAGCTTAGGGTGGGAGGAATATTTCTCTCCATACTGATCCTTATAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555230.5
ENST00000557068.5
CDS-3UTR CCA 90 bp GCTGGTCATCCTTCCACTGCAGGCATCTGTATCCGTAACACATTCAAGGCATGCTTCGTATTTACACGCTaGTATTTCAAATGCTTCTGT +
Preference number: 4 (lower is better)
Translates to: AGHPSTAGICIRNTFKACFVFTR*YFKCFC
Trigger: ACAGAAGCATTTGAAATACCAGCGTGTAAATACGAA...GCATGCCTTGAATGTGTTACGGATACAGATGCCTGCAGTGGAAGGATGACCAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000338904.7
ENST00000404716.7
ENST00000429244.6
ENST00000553541.5
ENST00000553706.5
ENST00000554964.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
ENST00000611135.1
CDS-3UTR CCA 90 bp TCAGGCAACCATTTCCTTTTCCTCTTGGTGCTGGTCATCCTTCCACTGCAGGCATTCGTATTTACACGCTaGTATTTCAAATGCTTCTGT +
Preference number: 4 (lower is better)
Translates to: SGNHFLFLLVLVILPLQAFVFTR*YFKCFC
Trigger: ACAGAAGCATTTGAAATACCAGCGTGTAAATACGAA...TGCCTGCAGTGGAAGGATGACCAGCACCAAGAGGAAAAGGAAATGGTTGCCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000338904.7
ENST00000404716.7
ENST00000429244.6
ENST00000553541.5
ENST00000553706.5
ENST00000554964.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
ENST00000611135.1
CDS-3UTR CCA 90 bp CAGGCAACCATTTCCTTTTCCTCTTGGTGCTGGTCATCCTTCCACTGCAGGCATTTCGTATTTACACGCTaGTATTTCAAATGCTTCTGT +
Preference number: 4 (lower is better)
Translates to: QATISFSSWCWSSFHCRHFVFTR*YFKCFC
Trigger: ACAGAAGCATTTGAAATACCAGCGTGTAAATACGAA...ATGCCTGCAGTGGAAGGATGACCAGCACCAAGAGGAAAAGGAAATGGTTGCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000338904.7
ENST00000404716.7
ENST00000429244.6
ENST00000553541.5
ENST00000553706.5
ENST00000554964.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
ENST00000611135.1
CDS-3UTR CCA 90 bp ACTAGAGAATCACATGGATGTGTCTTTGGAGCACACTTCAGGCAACCATTTCCTATTTCCTTTTCCTCTTaGTGCTGGTCATCCTTCCAC +
Preference number: 4 (lower is better)
Translates to: TRESHGCVFGAHFRQPFPISFSS*CWSSFH
Trigger: GTGGAAGGATGACCAGCACCAAGAGGAAAAGGAAAT...AGGAAATGGTTGCCTGAAGTGTGCTCCAAAGACACATCCATGTGATTCTCTAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000338904.7
ENST00000404716.7
ENST00000429244.6
ENST00000553541.5
ENST00000553706.5
ENST00000554964.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
ENST00000611135.1
CDS-3UTR CCA 90 bp TCTATAAGGATCAGTATGGAGAGAAATATTCCTCCCACCCTAAGCTCTCAGAGAGATCCGGCAGACTCCTaGTTCAAGCCTATTTTTGTC +
Preference number: 4 (lower is better)
Translates to: SIRISMERNIPPTLSSQRDPADS*FKPIFV
Trigger: GACAAAAATAGGCTTGAACCAGGAGTCTGCCGGATC...TCTCTGAGAGCTTAGGGTGGGAGGAATATTTCTCTCCATACTGATCCTTATAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000555230.5
ENST00000557068.5
CDS-3UTR TCA 90 bp TCTATAAGGATCAGTATGGAGAGAAATATTCCTCCCACCCTAAGCTCTCAGAGAGCCCTTCCTATAAAGTaGTTCGTATTTACACGCTGG +
Preference number: 4 (lower is better)
Translates to: SIRISMERNIPPTLSSQRALPIK*FVFTRW
Trigger: CCAGCGTGTAAATACGAATCACTTTATAGGAAGGGC...TCTCTGAGAGCTTAGGGTGGGAGGAATATTTCTCTCCATACTGATCCTTATAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000338904.7
ENST00000404716.7
ENST00000429244.6
ENST00000553541.5
ENST00000553706.5
ENST00000554964.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
ENST00000611135.1
CDS-3UTR TCA 90 bp AAAGGAAGGTGGGTGATTAAAGTGAATGGAAGCAAAATTACCATTCTCAACTTTCCTAAAATGGCGATGTaGGAATGGGCACTCTGGGGC +
Preference number: 4 (lower is better)
Translates to: KGRWVIKVNGSKITILNFPKMAM*EWALWG
Trigger: GCCCCAGAGTGCCCATTCTCACATCGCCATTTTAGG...AAAGTTGAGAATGGTAATTTTGCTTCCATTCACTTTAATCACCCACCTTCCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000555230.5
ENST00000557068.5
CDS-3UTR TCA 90 bp ATTTTTATTCTTTCTGCTGAACTAGAGAATCACATGGATGTGTCTTTGGAGCACGCCCCTAGAGTGCTTTaGCAAATTGGTCCATGCTCC +
Preference number: 4 (lower is better)
Translates to: IFILSAELENHMDVSLEHAPRVL*QIGPCS
Trigger: GGAGCATGGACCAATTTGTCAAAGCACTCTAGGGGC...GTGCTCCAAAGACACATCCATGTGATTCTCTAGTTCAGCAGAAAGAATAAAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000555230.5
ENST00000557068.5
CDS-3UTR GCA 90 bp TTCTCAACTTTGATCTATAAGGATCAGTATGGAGAGAAATATTCCTCCCACCCTTCCTTTTCCTCTTGGTaGTGGTCATCCTTCCACTGC +
Preference number: 4 (lower is better)
Translates to: FSTLIYKDQYGEKYSSHPSFSSW*WSSFHC
Trigger: GCAGTGGAAGGATGACCAGCACCAAGAGGAAAAGGA...AGGGTGGGAGGAATATTTCTCTCCATACTGATCCTTATAGATCAAAGTTGAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000338904.7
ENST00000404716.7
ENST00000429244.6
ENST00000553541.5
ENST00000553706.5
ENST00000554964.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
ENST00000611135.1
CDS-3UTR GCA 90 bp CAGGCATCTGTATCCGTAACACATTCAAGGCATGCTAACTTAGGGGACCTGCATTCTCATCATTTTTCCTaGAGACAAAACTCAATGCTG +
Preference number: 4 (lower is better)
Translates to: QASVSVTHSRHANLGDLHSHHFS*RQNSML
Trigger: CAGCATTGAGTTTTGTCTGCAGGAAAAATGATGAGA...ATGCAGGTCCCCTAAGTTAGCATGCCTTGAATGTGTTACGGATACAGATGCCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000429244.6
CDS-3UTR GCA 90 bp TTCTCAACTTTGATCTATAAGGATCAGTATGGAGAGAAATATTCCTCCCACCCTTGTGGGGCACAGTTATaGCACATGTTGCTGTTCTGG +
Preference number: 4 (lower is better)
Translates to: FSTLIYKDQYGEKYSSHPCGAQL*HMLLFW
Trigger: CCAGAACAGCAACATGTGGCATAACTGTGCCCCACA...AGGGTGGGAGGAATATTTCTCTCCATACTGATCCTTATAGATCAAAGTTGAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555230.5
ENST00000557068.5
CDS-3UTR CCA 90 bp ACATCTCAGAGCACCGTCTGTGAACCTAGCCTAAGGTGCTTTTGTGAGGTGTTGTTCGTATTTACACGCTaGTATTTCAAATGCTTCTGT +
Preference number: 4 (lower is better)
Translates to: TSQSTVCEPSLRCFCEVLFVFTR*YFKCFC
Trigger: ACAGAAGCATTTGAAATACCAGCGTGTAAATACGAA...CAACACCTCACAAAAGCACCTTAGGCTAGGTTCACAGACGGTGCTCTGAGATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000338904.7
ENST00000404716.7
ENST00000429244.6
ENST00000553541.5
ENST00000553706.5
ENST00000554964.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
ENST00000611135.1
CDS-3UTR CCA 90 bp CTGCAGGCATCTGTATCCGTAACACATTCAAGGCATGCTAACTTAGGGGACCTGTTCGTATTTACACGCTaGTATTTCAAATGCTTCTGT +
Preference number: 4 (lower is better)
Translates to: LQASVSVTHSRHANLGDLFVFTR*YFKCFC
Trigger: ACAGAAGCATTTGAAATACCAGCGTGTAAATACGAA...CAGGTCCCCTAAGTTAGCATGCCTTGAATGTGTTACGGATACAGATGCCTGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000338904.7
ENST00000404716.7
ENST00000429244.6
ENST00000553541.5
ENST00000553706.5
ENST00000554964.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
ENST00000611135.1
CDS-3UTR CCA 90 bp TCTATAAGGATCAGTATGGAGAGAAATATTCCTCCCACCCTAAGCTCTCAGAGAGGAATGCAGGCTTCTTaGTTTTTCCTCAGTTCTCAC +
Preference number: 4 (lower is better)
Translates to: SIRISMERNIPPTLSSQRGMQAS*FFLSSH
Trigger: GTGAGAACTGAGGAAAAACCAAGAAGCCTGCATTCC...TCTCTGAGAGCTTAGGGTGGGAGGAATATTTCTCTCCATACTGATCCTTATAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000404716.7
ENST00000553541.5
ENST00000553706.5
ENST00000554964.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
CDS-3UTR TCA 90 bp AGGTGGGTGATTAAAGTGAATGGAAGCAAAATTACCATTCTCAACTTTGATCTATCTGTATCCACCTCTTaGAACTGCACCAGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: RWVIKVNGSKITILNFDLSVSTS*NCTSCS
Trigger: GCTGCAGCTGGTGCAGTTTCAAGAGGTGGATACAGA...TAGATCAAAGTTGAGAATGGTAATTTTGCTTCCATTCACTTTAATCACCCACCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000338904.7
ENST00000404716.7
ENST00000429244.6
ENST00000553541.5
ENST00000553706.5
ENST00000554964.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
ENST00000611135.1
CDS-3UTR TCA 90 bp AAAGGAAGGTGGGTGATTAAAGTGAATGGAAGCAAAATTACCATTCTCAACTTTTCTGTATCCACCTCTTaGAACTGCACCAGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: KGRWVIKVNGSKITILNFSVSTS*NCTSCS
Trigger: GCTGCAGCTGGTGCAGTTTCAAGAGGTGGATACAGA...AAAGTTGAGAATGGTAATTTTGCTTCCATTCACTTTAATCACCCACCTTCCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000338904.7
ENST00000404716.7
ENST00000429244.6
ENST00000553541.5
ENST00000553706.5
ENST00000554964.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
ENST00000611135.1
CDS-3UTR TCA 90 bp TTCTCAACTTTGATCTATAAGGATCAGTATGGAGAGAAATATTCCTCCCACCCTAGACACCATCCTCACTaGGGAAACTTCTGTGTTCAG +
Preference number: 4 (lower is better)
Translates to: FSTLIYKDQYGEKYSSHPRHHPH*GNFCVQ
Trigger: CTGAACACAGAAGTTTCCTCAGTGAGGATGGTGTCT...AGGGTGGGAGGAATATTTCTCTCCATACTGATCCTTATAGATCAAAGTTGAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000338904.7
ENST00000404716.7
ENST00000429244.6
ENST00000553541.5
ENST00000553706.5
ENST00000554964.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
ENST00000611135.1
CDS-3UTR TCA 90 bp ATTTTTATTCTTTCTGCTGAACTAGAGAATCACATGGATGTGTCTTTGGAGCACTCTGCTAGGGCGATATaGCAAAGACACCATCCTCAC +
Preference number: 4 (lower is better)
Translates to: IFILSAELENHMDVSLEHSARAI*QRHHPH
Trigger: GTGAGGATGGTGTCTTTGTCATATCGCCCTAGCAGA...GTGCTCCAAAGACACATCCATGTGATTCTCTAGTTCAGCAGAAAGAATAAAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000338904.7
ENST00000404716.7
ENST00000429244.6
ENST00000553541.5
ENST00000553706.5
ENST00000554964.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
ENST00000611135.1
CDS-3UTR TCA 90 bp ATTTTTATTCTTTCTGCTGAACTAGAGAATCACATGGATGTGTCTTTGGAGCACGCCTCTGCAACATCTTaGTCTGTGGAATGCAGGCTT +
Preference number: 4 (lower is better)
Translates to: IFILSAELENHMDVSLEHASATS*SVECRL
Trigger: AAGCCTGCATTCCACAGATCAAGATGTTGCAGAGGC...GTGCTCCAAAGACACATCCATGTGATTCTCTAGTTCAGCAGAAAGAATAAAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000404716.7
ENST00000553706.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
CDS-3UTR TCA 90 bp TTCTCAACTTTGATCTATAAGGATCAGTATGGAGAGAAATATTCCTCCCACCCTGGCTGTCAAACACAATaGCTACTGAAATGGCCAGTG +
Preference number: 4 (lower is better)
Translates to: FSTLIYKDQYGEKYSSHPGCQTQ*LLKWPV
Trigger: CACTGGCCATTTCAGTAGTCATTGTGTTTGACAGCC...AGGGTGGGAGGAATATTTCTCTCCATACTGATCCTTATAGATCAAAGTTGAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555230.5
ENST00000557068.5
CDS-3UTR GCA 90 bp TCTATAAGGATCAGTATGGAGAGAAATATTCCTCCCACCCTAAGCTCTCAGAGACTGCAGACACTTAAATaGAAGAGGCACTATGTTGAC +
Preference number: 4 (lower is better)
Translates to: SIRISMERNIPPTLSSQRLQTLK*KRHYVD
Trigger: GTCAACATAGTGCCTCTTGCATTTAAGTGTCTGCAG...TCTCTGAGAGCTTAGGGTGGGAGGAATATTTCTCTCCATACTGATCCTTATAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338904.7
CDS-3UTR GCA 90 bp TCTATAAGGATCAGTATGGAGAGAAATATTCCTCCCACCCTAAGCTCTCAGAGAAAGGAAGTAATGTTCTaGCACCCAACGGTGTTTGTA +
Preference number: 4 (lower is better)
Translates to: SIRISMERNIPPTLSSQRKEVMF*HPTVFV
Trigger: TACAAACACCGTTGGGTGGCAGAACATTACTTCCTT...TCTCTGAGAGCTTAGGGTGGGAGGAATATTTCTCTCCATACTGATCCTTATAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000338904.7
ENST00000404716.7
ENST00000429244.6
ENST00000553541.5
ENST00000553706.5
ENST00000554964.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
ENST00000611135.1
CDS-3UTR GCA 90 bp TTCTCAACTTTGATCTATAAGGATCAGTATGGAGAGAAATATTCCTCCCACCCTGCAGACACTGTGGAATaGAGGCTTCTTGGTTTTTCC +
Preference number: 4 (lower is better)
Translates to: FSTLIYKDQYGEKYSSHPADTVE*RLLGFS
Trigger: GGAAAAACCAAGAAGCCTGCATTCCACAGTGTCTGC...AGGGTGGGAGGAATATTTCTCTCCATACTGATCCTTATAGATCAAAGTTGAGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000553541.5
ENST00000554964.5
CDS-3UTR GCA 90 bp TCTATAAGGATCAGTATGGAGAGAAATATTCCTCCCACCCTAAGCTCTCAGAGAACATCTGTCCTTAGCTaGTATTCTATGGCCTCTATC +
Preference number: 4 (lower is better)
Translates to: SIRISMERNIPPTLSSQRTSVLS*YSMASI
Trigger: GATAGAGGCCATAGAATAGCAGCTAAGGACAGATGT...TCTCTGAGAGCTTAGGGTGGGAGGAATATTTCTCTCCATACTGATCCTTATAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555230.5
ENST00000557068.5
CDS-3UTR CCA 90 bp ATTTTTATTCTTTCTGCTGAACTAGAGAATCACATGGATGTGTCTTTGGAGCACTTTTTCTTTGGTAGGTaGTCTGGCGGGCCCTGTACT +
Preference number: 4 (lower is better)
Translates to: IFILSAELENHMDVSLEHFFFGR*SGGPCT
Trigger: AGTACAGGGCCCGCCAGACCACCTACCAAAGAAAAA...GTGCTCCAAAGACACATCCATGTGATTCTCTAGTTCAGCAGAAAGAATAAAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 11 transcripts:
ENST00000338904.7
ENST00000404716.7
ENST00000429244.6
ENST00000553541.5
ENST00000553706.5
ENST00000554964.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
ENST00000611135.1
CDS-3UTR CCA 90 bp ATTTTTATTCTTTCTGCTGAACTAGAGAATCACATGGATGTGTCTTTGGAGCACTTTTCCTCTTGGTGCTaGTCATCCTTCCACTGCAGG +
Preference number: 4 (lower is better)
Translates to: IFILSAELENHMDVSLEHFSSWC*SSFHCR
Trigger: CCTGCAGTGGAAGGATGACCAGCACCAAGAGGAAAA...GTGCTCCAAAGACACATCCATGTGATTCTCTAGTTCAGCAGAAAGAATAAAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000338904.7
ENST00000404716.7
ENST00000429244.6
ENST00000553541.5
ENST00000553706.5
ENST00000554964.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
ENST00000611135.1
CDS-3UTR CCA 90 bp TCTATAAGGATCAGTATGGAGAGAAATATTCCTCCCACCCTAAGCTCTCAGAGACAACATCTTGATCTGTaGAATGCAGGCTTCTTGGTT +
Preference number: 4 (lower is better)
Translates to: SIRISMERNIPPTLSSQRQHLDL*NAGFLV
Trigger: AACCAAGAAGCCTGCATTCCACAGATCAAGATGTTG...TCTCTGAGAGCTTAGGGTGGGAGGAATATTTCTCTCCATACTGATCCTTATAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000404716.7
ENST00000553706.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
CDS-3UTR CCA 90 bp ACTAGAGAATCACATGGATGTGTCTTTGGAGCACACTTCAGGCAACCATTTCCTAGTGCTTTGACAAATTaGTCCATGCTCCATGAAGAA +
Preference number: 4 (lower is better)
Translates to: TRESHGCVFGAHFRQPFPSALTN*SMLHEE
Trigger: TTCTTCATGGAGCATGGACCAATTTGTCAAAGCACT...AGGAAATGGTTGCCTGAAGTGTGCTCCAAAGACACATCCATGTGATTCTCTAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555230.5
ENST00000557068.5
CDS-3UTR TCA 90 bp ACTAGAGAATCACATGGATGTGTCTTTGGAGCACACTTCAGGCAACCATTTCCTTTACAGTACTCTATATaGTTTAGTGGCATTCCAGGT +
Preference number: 4 (lower is better)
Translates to: TRESHGCVFGAHFRQPFPLQYSI*FSGIPG
Trigger: ACCTGGAATGCCACTAAATCATATAGAGTACTGTAA...AGGAAATGGTTGCCTGAAGTGTGCTCCAAAGACACATCCATGTGATTCTCTAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000338904.7
ENST00000404716.7
ENST00000429244.6
ENST00000553541.5
ENST00000553706.5
ENST00000554964.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
ENST00000611135.1
CDS-3UTR TCA 90 bp AAAGGAAGGTGGGTGATTAAAGTGAATGGAAGCAAAATTACCATTCTCAACTTTTCTGCTAGGGCGATATaGCAAAGACACCATCCTCAC +
Preference number: 4 (lower is better)
Translates to: KGRWVIKVNGSKITILNFSARAI*QRHHPH
Trigger: GTGAGGATGGTGTCTTTGTCATATCGCCCTAGCAGA...AAAGTTGAGAATGGTAATTTTGCTTCCATTCACTTTAATCACCCACCTTCCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000338904.7
ENST00000404716.7
ENST00000429244.6
ENST00000553541.5
ENST00000553706.5
ENST00000554964.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
ENST00000611135.1
CDS-3UTR TCA 90 bp TTCTCAACTTTGATCTATAAGGATCAGTATGGAGAGAAATATTCCTCCCACCCTTGGTGGCAACCTGAGTaGTTCTCTAACAGTCATTAC +
Preference number: 4 (lower is better)
Translates to: FSTLIYKDQYGEKYSSHPWWQPE*FSNSHY
Trigger: GTAATGACTGTTAGAGAATCACTCAGGTTGCCACCA...AGGGTGGGAGGAATATTTCTCTCCATACTGATCCTTATAGATCAAAGTTGAGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555230.5
ENST00000557068.5
CDS-3UTR GCA 90 bp AAAGGAAGGTGGGTGATTAAAGTGAATGGAAGCAAAATTACCATTCTCAACTTTTCCTTTTCCTCTTGGTaGTGGTCATCCTTCCACTGC +
Preference number: 4 (lower is better)
Translates to: KGRWVIKVNGSKITILNFSFSSW*WSSFHC
Trigger: GCAGTGGAAGGATGACCAGCACCAAGAGGAAAAGGA...AAAGTTGAGAATGGTAATTTTGCTTCCATTCACTTTAATCACCCACCTTCCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000338904.7
ENST00000404716.7
ENST00000429244.6
ENST00000553541.5
ENST00000553706.5
ENST00000554964.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
ENST00000611135.1
CDS-3UTR GCA 90 bp ACTAGAGAATCACATGGATGTGTCTTTGGAGCACACTTCAGGCAACCATTTCCTGAGATGTTTCTTAAATaGAAGAGGCACTATGTTGAC +
Preference number: 4 (lower is better)
Translates to: TRESHGCVFGAHFRQPFPEMFLK*KRHYVD
Trigger: GTCAACATAGTGCCTCTTGCATTTAAGAAACATCTC...AGGAAATGGTTGCCTGAAGTGTGCTCCAAAGACACATCCATGTGATTCTCTAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000404716.7
ENST00000429244.6
ENST00000553541.5
ENST00000553706.5
ENST00000557068.5
CDS-3UTR GCA 90 bp AGGTGGGTGATTAAAGTGAATGGAAGCAAAATTACCATTCTCAACTTTGATCTAAGAACGCGGAGCCTCTaGAACATCTTGATCTGTGGA +
Preference number: 4 (lower is better)
Translates to: RWVIKVNGSKITILNFDLRTRSL*NILICG
Trigger: TCCACAGATCAAGATGTTGCAGAGGCTCCGCGTTCT...TAGATCAAAGTTGAGAATGGTAATTTTGCTTCCATTCACTTTAATCACCCACCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000404716.7
ENST00000553706.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
CDS-3UTR CCA 90 bp AGGTGGGTGATTAAAGTGAATGGAAGCAAAATTACCATTCTCAACTTTGATCTATTTTTCTTTGGTAGGTaGTCTGGCGGGCCCTGTACT +
Preference number: 4 (lower is better)
Translates to: RWVIKVNGSKITILNFDLFFFGR*SGGPCT
Trigger: AGTACAGGGCCCGCCAGACCACCTACCAAAGAAAAA...TAGATCAAAGTTGAGAATGGTAATTTTGCTTCCATTCACTTTAATCACCCACCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000338904.7
ENST00000404716.7
ENST00000429244.6
ENST00000553541.5
ENST00000553706.5
ENST00000554964.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
ENST00000611135.1
CDS-3UTR CCA 90 bp TTCTCAACTTTGATCTATAAGGATCAGTATGGAGAGAAATATTCCTCCCACCCTATTTCCTTTTCCTCTTaGTGCTGGTCATCCTTCCAC +
Preference number: 4 (lower is better)
Translates to: FSTLIYKDQYGEKYSSHPISFSS*CWSSFH
Trigger: GTGGAAGGATGACCAGCACCAAGAGGAAAAGGAAAT...AGGGTGGGAGGAATATTTCTCTCCATACTGATCCTTATAGATCAAAGTTGAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000338904.7
ENST00000404716.7
ENST00000429244.6
ENST00000553541.5
ENST00000553706.5
ENST00000554964.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
ENST00000611135.1
CDS-3UTR CCA 90 bp TCTATAAGGATCAGTATGGAGAGAAATATTCCTCCCACCCTAAGCTCTCAGAGAAGTGCTTTGACAAATTaGTCCATGCTCCATGAAGAA +
Preference number: 4 (lower is better)
Translates to: SIRISMERNIPPTLSSQRSALTN*SMLHEE
Trigger: TTCTTCATGGAGCATGGACCAATTTGTCAAAGCACT...TCTCTGAGAGCTTAGGGTGGGAGGAATATTTCTCTCCATACTGATCCTTATAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555230.5
ENST00000557068.5
CDS-3UTR TCA 90 bp ATTTTTATTCTTTCTGCTGAACTAGAGAATCACATGGATGTGTCTTTGGAGCACCAAGAGGCACTATGTTaGCTCACAGAAGTTGGAAGT +
Preference number: 4 (lower is better)
Translates to: IFILSAELENHMDVSLEHQEALC*LTEVGS
Trigger: ACTTCCAACTTCTGTGAGTCAACATAGTGCCTCTTG...GTGCTCCAAAGACACATCCATGTGATTCTCTAGTTCAGCAGAAAGAATAAAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000338904.7
ENST00000404716.7
ENST00000429244.6
ENST00000553541.5
ENST00000553706.5
ENST00000554964.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
CDS-3UTR TCA 90 bp AAAGGAAGGTGGGTGATTAAAGTGAATGGAAGCAAAATTACCATTCTCAACTTTCCTAAGGTGCTTTTGTaGGGTGTTGGGAAAGGAAGA +
Preference number: 4 (lower is better)
Translates to: KGRWVIKVNGSKITILNFPKVLL*GVGKGR
Trigger: TCTTCCTTTCCCAACACCTCACAAAAGCACCTTAGG...AAAGTTGAGAATGGTAATTTTGCTTCCATTCACTTTAATCACCCACCTTCCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000338904.7
ENST00000404716.7
ENST00000429244.6
ENST00000553541.5
ENST00000553706.5
ENST00000554964.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
ENST00000611135.1
CDS-3UTR TCA 90 bp AGGTGGGTGATTAAAGTGAATGGAAGCAAAATTACCATTCTCAACTTTGATCTACCTAAGGTGCTTTTGTaGGGTGTTGGGAAAGGAAGA +
Preference number: 4 (lower is better)
Translates to: RWVIKVNGSKITILNFDLPKVLL*GVGKGR
Trigger: TCTTCCTTTCCCAACACCTCACAAAAGCACCTTAGG...TAGATCAAAGTTGAGAATGGTAATTTTGCTTCCATTCACTTTAATCACCCACCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000338904.7
ENST00000404716.7
ENST00000429244.6
ENST00000553541.5
ENST00000553706.5
ENST00000554964.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
ENST00000611135.1
CDS-3UTR TCA 90 bp AAAGGAAGGTGGGTGATTAAAGTGAATGGAAGCAAAATTACCATTCTCAACTTTGTCTCTTCAAAAGAGTaGTCCCATGGTGACAGGTCA +
Preference number: 4 (lower is better)
Translates to: KGRWVIKVNGSKITILNFVSSKE*SHGDRS
Trigger: TGACCTGTCACCATGGGATCACTCTTTTGAAGAGAC...AAAGTTGAGAATGGTAATTTTGCTTCCATTCACTTTAATCACCCACCTTCCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000404716.7
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000611135.1
CDS-3UTR GCA 90 bp AAAGGAAGGTGGGTGATTAAAGTGAATGGAAGCAAAATTACCATTCTCAACTTTGAACCTAGCCTAAGGTaGTTTTGTGAGGTGTTGGGA +
Preference number: 4 (lower is better)
Translates to: KGRWVIKVNGSKITILNFEPSLR*FCEVLG
Trigger: TCCCAACACCTCACAAAAGCACCTTAGGCTAGGTTC...AAAGTTGAGAATGGTAATTTTGCTTCCATTCACTTTAATCACCCACCTTCCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000338904.7
ENST00000404716.7
ENST00000429244.6
ENST00000553541.5
ENST00000553706.5
ENST00000554964.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
ENST00000611135.1
CDS-3UTR GCA 90 bp TCTATAAGGATCAGTATGGAGAGAAATATTCCTCCCACCCTAAGCTCTCAGAGATCCGTGAAGGGAAGTTaGTTAAAATCTCACATTAGA +
Preference number: 4 (lower is better)
Translates to: SIRISMERNIPPTLSSQRSVKGS*LKSHIR
Trigger: TCTAATGTGAGATTTTAAGCAACTTCCCTTCACGGA...TCTCTGAGAGCTTAGGGTGGGAGGAATATTTCTCTCCATACTGATCCTTATAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555230.5
ENST00000557068.5
CDS-3UTR CCA 90 bp TTCTCAACTTTGATCTATAAGGATCAGTATGGAGAGAAATATTCCTCCCACCCTACTTCTGTGTTCAGGTaGCTCCACGAGATCATTTAT +
Preference number: 4 (lower is better)
Translates to: FSTLIYKDQYGEKYSSHPTSVFR*LHEIIY
Trigger: ATAAATGATCTCGTGGAGCCACCTGAACACAGAAGT...AGGGTGGGAGGAATATTTCTCTCCATACTGATCCTTATAGATCAAAGTTGAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000338904.7
ENST00000404716.7
ENST00000429244.6
ENST00000553541.5
ENST00000553706.5
ENST00000554964.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
ENST00000611135.1
CDS-3UTR CCA 90 bp TTCTCAACTTTGATCTATAAGGATCAGTATGGAGAGAAATATTCCTCCCACCCTGGAATTAAAGAAAGGTaGGTGTTGGGGAACACATCA +
Preference number: 4 (lower is better)
Translates to: FSTLIYKDQYGEKYSSHPGIKER*VLGNTS
Trigger: TGATGTGTTCCCCAACACCCACCTTTCTTTAATTCC...AGGGTGGGAGGAATATTTCTCTCCATACTGATCCTTATAGATCAAAGTTGAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555230.5
ENST00000557068.5
CDS-3UTR TCA 90 bp AAAGGAAGGTGGGTGATTAAAGTGAATGGAAGCAAAATTACCATTCTCAACTTTGCCCTTCCTATAAAGTaGTTCGTATTTACACGCTGG +
Preference number: 4 (lower is better)
Translates to: KGRWVIKVNGSKITILNFALPIK*FVFTRW
Trigger: CCAGCGTGTAAATACGAATCACTTTATAGGAAGGGC...AAAGTTGAGAATGGTAATTTTGCTTCCATTCACTTTAATCACCCACCTTCCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000338904.7
ENST00000404716.7
ENST00000429244.6
ENST00000553541.5
ENST00000553706.5
ENST00000554964.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
ENST00000611135.1
CDS-3UTR TCA 90 bp ATTTTTATTCTTTCTGCTGAACTAGAGAATCACATGGATGTGTCTTTGGAGCACATTACCTGGAGACCTTaGTCTATCAGTGATGGAGAT +
Preference number: 4 (lower is better)
Translates to: IFILSAELENHMDVSLEHITWRP*SISDGD
Trigger: ATCTCCATCACTGATAGATCAAGGTCTCCAGGTAAT...GTGCTCCAAAGACACATCCATGTGATTCTCTAGTTCAGCAGAAAGAATAAAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000555230.5
ENST00000557068.5
CDS-3UTR GCA 90 bp TTCTCAACTTTGATCTATAAGGATCAGTATGGAGAGAAATATTCCTCCCACCCTTCTCATCATTTTTCCTaGAGACATGTCATCAGTGTC +
Preference number: 4 (lower is better)
Translates to: FSTLIYKDQYGEKYSSHPSHHFS*RHVISV
Trigger: GACACTGATGACATGTCTGCAGGAAAAATGATGAGA...AGGGTGGGAGGAATATTTCTCTCCATACTGATCCTTATAGATCAAAGTTGAGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000404716.7
ENST00000556208.5
ENST00000611135.1
CDS-3UTR GCA 90 bp ATTTTTATTCTTTCTGCTGAACTAGAGAATCACATGGATGTGTCTTTGGAGCACTCTCATCATTTTTCCTaGAGACACTGTGGAATGCAG +
Preference number: 4 (lower is better)
Translates to: IFILSAELENHMDVSLEHSHHFS*RHCGMQ
Trigger: CTGCATTCCACAGTGTCTGCAGGAAAAATGATGAGA...GTGCTCCAAAGACACATCCATGTGATTCTCTAGTTCAGCAGAAAGAATAAAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000553541.5
ENST00000554964.5
CDS-3UTR CCA 90 bp AAAGGAAGGTGGGTGATTAAAGTGAATGGAAGCAAAATTACCATTCTCAACTTTATTTCCTTTTCCTCTTaGTGCTGGTCATCCTTCCAC +
Preference number: 4 (lower is better)
Translates to: KGRWVIKVNGSKITILNFISFSS*CWSSFH
Trigger: GTGGAAGGATGACCAGCACCAAGAGGAAAAGGAAAT...AAAGTTGAGAATGGTAATTTTGCTTCCATTCACTTTAATCACCCACCTTCCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000338904.7
ENST00000404716.7
ENST00000429244.6
ENST00000553541.5
ENST00000553706.5
ENST00000554964.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
ENST00000611135.1
CDS-3UTR CCA 90 bp AAAGGAAGGTGGGTGATTAAAGTGAATGGAAGCAAAATTACCATTCTCAACTTTGGAATGCAGGCTTCTTaGTTTTTCCTCAGTTCTCAC +
Preference number: 4 (lower is better)
Translates to: KGRWVIKVNGSKITILNFGMQAS*FFLSSH
Trigger: GTGAGAACTGAGGAAAAACCAAGAAGCCTGCATTCC...AAAGTTGAGAATGGTAATTTTGCTTCCATTCACTTTAATCACCCACCTTCCTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000404716.7
ENST00000553541.5
ENST00000553706.5
ENST00000554964.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
CDS-3UTR TCA 90 bp TTCTCAACTTTGATCTATAAGGATCAGTATGGAGAGAAATATTCCTCCCACCCTTTACAGTACTCTATATaGTTTAGTGGCATTCCAGGT +
Preference number: 4 (lower is better)
Translates to: FSTLIYKDQYGEKYSSHPLQYSI*FSGIPG
Trigger: ACCTGGAATGCCACTAAATCATATAGAGTACTGTAA...AGGGTGGGAGGAATATTTCTCTCCATACTGATCCTTATAGATCAAAGTTGAGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000338904.7
ENST00000404716.7
ENST00000429244.6
ENST00000553541.5
ENST00000553706.5
ENST00000554964.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
ENST00000611135.1
CDS-3UTR TCA 90 bp AAAGGAAGGTGGGTGATTAAAGTGAATGGAAGCAAAATTACCATTCTCAACTTTAGGAAGGTTCAAGTTTaGGCAGCTGGGATAAATACA +
Preference number: 4 (lower is better)
Translates to: KGRWVIKVNGSKITILNFRKVQV*AAGINT
Trigger: TGTATTTATCCCAGCTGCTCAAACTTGAACCTTCCT...AAAGTTGAGAATGGTAATTTTGCTTCCATTCACTTTAATCACCCACCTTCCTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555230.5
ENST00000557068.5
CDS-3UTR GCA 90 bp AGGTGGGTGATTAAAGTGAATGGAAGCAAAATTACCATTCTCAACTTTGATCTAAAGGAAGTAATGTTCTaGCACCCAACGGTGTTTGTA +
Preference number: 4 (lower is better)
Translates to: RWVIKVNGSKITILNFDLKEVMF*HPTVFV
Trigger: TACAAACACCGTTGGGTGGCAGAACATTACTTCCTT...TAGATCAAAGTTGAGAATGGTAATTTTGCTTCCATTCACTTTAATCACCCACCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000338904.7
ENST00000404716.7
ENST00000429244.6
ENST00000553541.5
ENST00000553706.5
ENST00000554964.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
ENST00000611135.1
CDS-3UTR CCA 90 bp AGGTGGGTGATTAAAGTGAATGGAAGCAAAATTACCATTCTCAACTTTGATCTAACTTCTGTGTTCAGGTaGCTCCACGAGATCATTTAT +
Preference number: 4 (lower is better)
Translates to: RWVIKVNGSKITILNFDLTSVFR*LHEIIY
Trigger: ATAAATGATCTCGTGGAGCCACCTGAACACAGAAGT...TAGATCAAAGTTGAGAATGGTAATTTTGCTTCCATTCACTTTAATCACCCACCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000338904.7
ENST00000404716.7
ENST00000429244.6
ENST00000553541.5
ENST00000553706.5
ENST00000554964.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
ENST00000611135.1
CDS-3UTR CCA 90 bp AAAGGAAGGTGGGTGATTAAAGTGAATGGAAGCAAAATTACCATTCTCAACTTTCAACATCTTGATCTGTaGAATGCAGGCTTCTTGGTT +
Preference number: 4 (lower is better)
Translates to: KGRWVIKVNGSKITILNFQHLDL*NAGFLV
Trigger: AACCAAGAAGCCTGCATTCCACAGATCAAGATGTTG...AAAGTTGAGAATGGTAATTTTGCTTCCATTCACTTTAATCACCCACCTTCCTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000404716.7
ENST00000553706.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
CDS-3UTR CCA 90 bp AGGTGGGTGATTAAAGTGAATGGAAGCAAAATTACCATTCTCAACTTTGATCTAGGAATTAAAGAAAGGTaGGTGTTGGGGAACACATCA +
Preference number: 4 (lower is better)
Translates to: RWVIKVNGSKITILNFDLGIKER*VLGNTS
Trigger: TGATGTGTTCCCCAACACCCACCTTTCTTTAATTCC...TAGATCAAAGTTGAGAATGGTAATTTTGCTTCCATTCACTTTAATCACCCACCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000555230.5
ENST00000557068.5
CDS-3UTR CCA 90 bp TTCTCAACTTTGATCTATAAGGATCAGTATGGAGAGAAATATTCCTCCCACCCTCCTCCTGTTCTAGGCTaGATACTAAGTTTGTATATA +
Preference number: 4 (lower is better)
Translates to: FSTLIYKDQYGEKYSSHPPPVLG*ILSLYI
Trigger: TATATACAAACTTAGTATCCAGCCTAGAACAGGAGG...AGGGTGGGAGGAATATTTCTCTCCATACTGATCCTTATAGATCAAAGTTGAGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555230.5
ENST00000557068.5
CDS-3UTR TCA 90 bp ATTTTTATTCTTTCTGCTGAACTAGAGAATCACATGGATGTGTCTTTGGAGCACTTACAGTACTCTATATaGTTTAGTGGCATTCCAGGT +
Preference number: 4 (lower is better)
Translates to: IFILSAELENHMDVSLEHLQYSI*FSGIPG
Trigger: ACCTGGAATGCCACTAAATCATATAGAGTACTGTAA...GTGCTCCAAAGACACATCCATGTGATTCTCTAGTTCAGCAGAAAGAATAAAAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000338904.7
ENST00000404716.7
ENST00000429244.6
ENST00000553541.5
ENST00000553706.5
ENST00000554964.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
ENST00000611135.1
CDS-3UTR GCA 90 bp ATTTTTATTCTTTCTGCTGAACTAGAGAATCACATGGATGTGTCTTTGGAGCACGAGATGTTTCTTAAATaGAAGAGGCACTATGTTGAC +
Preference number: 4 (lower is better)
Translates to: IFILSAELENHMDVSLEHEMFLK*KRHYVD
Trigger: GTCAACATAGTGCCTCTTGCATTTAAGAAACATCTC...GTGCTCCAAAGACACATCCATGTGATTCTCTAGTTCAGCAGAAAGAATAAAAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000404716.7
ENST00000429244.6
ENST00000553541.5
ENST00000553706.5
ENST00000557068.5
CDS-3UTR CCA 90 bp AAAGGAAGGTGGGTGATTAAAGTGAATGGAAGCAAAATTACCATTCTCAACTTTTTAGCTGCTATTCTATaGCCTCTATCAGTCTGGTTT +
Preference number: 4 (lower is better)
Translates to: KGRWVIKVNGSKITILNFLAAIL*PLSVWF
Trigger: AAACCAGACTGATAGAGGCCATAGAATAGCAGCTAA...AAAGTTGAGAATGGTAATTTTGCTTCCATTCACTTTAATCACCCACCTTCCTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000555230.5
ENST00000557068.5
CDS-3UTR CCA 90 bp TTCTCAACTTTGATCTATAAGGATCAGTATGGAGAGAAATATTCCTCCCACCCTTCAAGTTTGAGCAGCTaGGATAAATACATTCTTGAA +
Preference number: 4 (lower is better)
Translates to: FSTLIYKDQYGEKYSSHPSSLSS*DKYILE
Trigger: TTCAAGAATGTATTTATCCCAGCTGCTCAAACTTGA...AGGGTGGGAGGAATATTTCTCTCCATACTGATCCTTATAGATCAAAGTTGAGAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555230.5
ENST00000557068.5
CDS-3UTR TCA 90 bp AGGTGGGTGATTAAAGTGAATGGAAGCAAAATTACCATTCTCAACTTTGATCTATTACAGTACTCTATATaGTTTAGTGGCATTCCAGGT +
Preference number: 4 (lower is better)
Translates to: RWVIKVNGSKITILNFDLLQYSI*FSGIPG
Trigger: ACCTGGAATGCCACTAAATCATATAGAGTACTGTAA...TAGATCAAAGTTGAGAATGGTAATTTTGCTTCCATTCACTTTAATCACCCACCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000338904.7
ENST00000404716.7
ENST00000429244.6
ENST00000553541.5
ENST00000553706.5
ENST00000554964.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
ENST00000611135.1
CDS-3UTR GCA 90 bp AGGTGGGTGATTAAAGTGAATGGAAGCAAAATTACCATTCTCAACTTTGATCTAGAGATGTTTCTTAAATaGAAGAGGCACTATGTTGAC +
Preference number: 4 (lower is better)
Translates to: RWVIKVNGSKITILNFDLEMFLK*KRHYVD
Trigger: GTCAACATAGTGCCTCTTGCATTTAAGAAACATCTC...TAGATCAAAGTTGAGAATGGTAATTTTGCTTCCATTCACTTTAATCACCCACCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000404716.7
ENST00000429244.6
ENST00000553541.5
ENST00000553706.5
ENST00000557068.5
CDS-3UTR CCA 90 bp AAAGGAAGGTGGGTGATTAAAGTGAATGGAAGCAAAATTACCATTCTCAACTTTTTCGTATTTACACGCTaGTATTTCAAATGCTTCTGT +
Preference number: 4 (lower is better)
Translates to: KGRWVIKVNGSKITILNFFVFTR*YFKCFC
Trigger: ACAGAAGCATTTGAAATACCAGCGTGTAAATACGAA...AAAGTTGAGAATGGTAATTTTGCTTCCATTCACTTTAATCACCCACCTTCCTTT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000338904.7
ENST00000404716.7
ENST00000429244.6
ENST00000553541.5
ENST00000553706.5
ENST00000554964.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
ENST00000611135.1
CDS-3UTR CCA 90 bp AGGTGGGTGATTAAAGTGAATGGAAGCAAAATTACCATTCTCAACTTTGATCTATTCGTATTTACACGCTaGTATTTCAAATGCTTCTGT +
Preference number: 4 (lower is better)
Translates to: RWVIKVNGSKITILNFDLFVFTR*YFKCFC
Trigger: ACAGAAGCATTTGAAATACCAGCGTGTAAATACGAA...TAGATCAAAGTTGAGAATGGTAATTTTGCTTCCATTCACTTTAATCACCCACCT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000338904.7
ENST00000404716.7
ENST00000429244.6
ENST00000553541.5
ENST00000553706.5
ENST00000554964.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
ENST00000611135.1
CDS-3UTR CCA 90 bp AAAGGAAGGTGGGTGATTAAAGTGAATGGAAGCAAAATTACCATTCTCAACTTTTCAAGTTTGAGCAGCTaGGATAAATACATTCTTGAA +
Preference number: 4 (lower is better)
Translates to: KGRWVIKVNGSKITILNFSSLSS*DKYILE
Trigger: TTCAAGAATGTATTTATCCCAGCTGCTCAAACTTGA...AAAGTTGAGAATGGTAATTTTGCTTCCATTCACTTTAATCACCCACCTTCCTTT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000555230.5
ENST00000557068.5
CDS-3UTR CAA 90 bp TTAGGGGACCTGCATGAGACCACATCTCAGAGCACCGTCTGTGAACCTAGCCTAATCTGTATCCACCTCTaGAAACTGCACCAGCTGCAG +
Preference number: 5 (lower is better)
Translates to: LGDLHETTSQSTVCEPSLICIHL*KLHQLQ
Trigger: CTGCAGCTGGTGCAGTTTCAAGAGGTGGATACAGAT...TAGGCTAGGTTCACAGACGGTGCTCTGAGATGTGGTCTCATGCAGGTCCCCTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000338904.7
ENST00000404716.7
ENST00000429244.6
ENST00000553541.5
ENST00000553706.5
ENST00000554964.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
ENST00000611135.1
CDS-3UTR CAA 90 bp AGGCATGCTAACTTAGGGGACCTGCATGAGACCACATCTCAGAGCACCGTCTGTATCTGTATCCACCTCTaGAAACTGCACCAGCTGCAG +
Preference number: 5 (lower is better)
Translates to: RHANLGDLHETTSQSTVCICIHL*KLHQLQ
Trigger: CTGCAGCTGGTGCAGTTTCAAGAGGTGGATACAGAT...ACAGACGGTGCTCTGAGATGTGGTCTCATGCAGGTCCCCTAAGTTAGCATGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000338904.7
ENST00000404716.7
ENST00000429244.6
ENST00000553541.5
ENST00000553706.5
ENST00000554964.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
ENST00000611135.1
CDS-3UTR CAA 90 bp AGGCATGCTAACTTAGGGGACCTGCATGAGACCACATCTCAGAGCACCGTCTGTCTTTTGACTTTTTCTTaGGTAGGTGGTCTGGCGGGC +
Preference number: 5 (lower is better)
Translates to: RHANLGDLHETTSQSTVCLLTFS*VGGLAG
Trigger: GCCCGCCAGACCACCTACCAAAGAAAAAGTCAAAAG...ACAGACGGTGCTCTGAGATGTGGTCTCATGCAGGTCCCCTAAGTTAGCATGCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 11 transcripts:
ENST00000338904.7
ENST00000404716.7
ENST00000429244.6
ENST00000553541.5
ENST00000553706.5
ENST00000554964.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
ENST00000611135.1
CDS-3UTR CAA 90 bp TTAGGGGACCTGCATGAGACCACATCTCAGAGCACCGTCTGTGAACCTAGCCTACACATGGATGTGTCTTaGGAGCACACTTCAGGCAAC +
Preference number: 5 (lower is better)
Translates to: LGDLHETTSQSTVCEPSLHMDVS*EHTSGN
Trigger: GTTGCCTGAAGTGTGCTCCAAAGACACATCCATGTG...TAGGCTAGGTTCACAGACGGTGCTCTGAGATGTGGTCTCATGCAGGTCCCCTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000338904.7
ENST00000404716.7
ENST00000429244.6
ENST00000553541.5
ENST00000553706.5
ENST00000554964.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
ENST00000611135.1
CDS-3UTR CAA 90 bp TTAGGGGACCTGCATGAGACCACATCTCAGAGCACCGTCTGTGAACCTAGCCTAAGCCTCTGCAACATCTaGATCTGTGGAATGCAGGCT +
Preference number: 5 (lower is better)
Translates to: LGDLHETTSQSTVCEPSLSLCNI*ICGMQA
Trigger: AGCCTGCATTCCACAGATCAAGATGTTGCAGAGGCT...TAGGCTAGGTTCACAGACGGTGCTCTGAGATGTGGTCTCATGCAGGTCCCCTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000404716.7
ENST00000553706.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
CDS-3UTR CAA 90 bp AGGCATGCTAACTTAGGGGACCTGCATGAGACCACATCTCAGAGCACCGTCTGTTCCTCTTGCCCTTATTaGACCATAGATGCCCTTGGG +
Preference number: 5 (lower is better)
Translates to: RHANLGDLHETTSQSTVCSSCPY*TIDALG
Trigger: CCCAAGGGCATCTATGGTCAAATAAGGGCAAGAGGA...ACAGACGGTGCTCTGAGATGTGGTCTCATGCAGGTCCCCTAAGTTAGCATGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555230.5
ENST00000557068.5
CDS TCA 90 bp CATCAGTGTCCTCCAGGAAGTCTCTTCAAAAGAGTGATCCCATGGTaGCAGGTCAGAGAGCTCGGAACATACTCTCACAAGAACGCGGAG +
Preference number: 5 (lower is better)
Translates to: HQCPPGSLFKRVIPW*QVRELGTYSHKNAE
Trigger: CTCCGCGTTCTTGTGAGAGTATGTTCCGAGCTCTCTGACCTGTCACCATGGGATCACTCTTTTGAAGAGACTTCCTGGAGGACACTGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000404716.7
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000611135.1
CDS-3UTR CAA 90 bp AGGCATGCTAACTTAGGGGACCTGCATGAGACCACATCTCAGAGCACCGTCTGTGCAAGAGGCACTATGTaGACTCACAGAAGTTGGAAG +
Preference number: 5 (lower is better)
Translates to: RHANLGDLHETTSQSTVCARGTM*THRSWK
Trigger: CTTCCAACTTCTGTGAGTCAACATAGTGCCTCTTGC...ACAGACGGTGCTCTGAGATGTGGTCTCATGCAGGTCCCCTAAGTTAGCATGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000338904.7
ENST00000404716.7
ENST00000429244.6
ENST00000553541.5
ENST00000553706.5
ENST00000554964.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
CDS-3UTR CAA 90 bp TCAGGCAACCATTTCCTTTTCCTCTTGGTGCTGGTCATCCTTCCACTGCAGGCAATCTGTATCCACCTCTaGAAACTGCACCAGCTGCAG +
Preference number: 5 (lower is better)
Translates to: SGNHFLFLLVLVILPLQAICIHL*KLHQLQ
Trigger: CTGCAGCTGGTGCAGTTTCAAGAGGTGGATACAGAT...TGCCTGCAGTGGAAGGATGACCAGCACCAAGAGGAAAAGGAAATGGTTGCCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000338904.7
ENST00000404716.7
ENST00000429244.6
ENST00000553541.5
ENST00000553706.5
ENST00000554964.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
ENST00000611135.1
CDS-3UTR CAA 90 bp GAGACCACATCTCAGAGCACCGTCTGTGAACCTAGCCTAAGGTGCTTTTGTGAGATCTGTATCCACCTCTaGAAACTGCACCAGCTGCAG +
Preference number: 5 (lower is better)
Translates to: ETTSQSTVCEPSLRCFCEICIHL*KLHQLQ
Trigger: CTGCAGCTGGTGCAGTTTCAAGAGGTGGATACAGAT...CTCACAAAAGCACCTTAGGCTAGGTTCACAGACGGTGCTCTGAGATGTGGTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000338904.7
ENST00000404716.7
ENST00000429244.6
ENST00000553541.5
ENST00000553706.5
ENST00000554964.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
ENST00000611135.1
CDS-3UTR CAA 90 bp GCTGGTCATCCTTCCACTGCAGGCATCTGTATCCGTAACACATTCAAGGCATGCATCTGTATCCACCTCTaGAAACTGCACCAGCTGCAG +
Preference number: 5 (lower is better)
Translates to: AGHPSTAGICIRNTFKACICIHL*KLHQLQ
Trigger: CTGCAGCTGGTGCAGTTTCAAGAGGTGGATACAGAT...GCATGCCTTGAATGTGTTACGGATACAGATGCCTGCAGTGGAAGGATGACCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000338904.7
ENST00000404716.7
ENST00000429244.6
ENST00000553541.5
ENST00000553706.5
ENST00000554964.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
ENST00000611135.1
CDS-3UTR CAA 90 bp TCAGGCAACCATTTCCTTTTCCTCTTGGTGCTGGTCATCCTTCCACTGCAGGCACTTTTGACTTTTTCTTaGGTAGGTGGTCTGGCGGGC +
Preference number: 5 (lower is better)
Translates to: SGNHFLFLLVLVILPLQALLTFS*VGGLAG
Trigger: GCCCGCCAGACCACCTACCAAAGAAAAAGTCAAAAG...TGCCTGCAGTGGAAGGATGACCAGCACCAAGAGGAAAAGGAAATGGTTGCCTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 11 transcripts:
ENST00000338904.7
ENST00000404716.7
ENST00000429244.6
ENST00000553541.5
ENST00000553706.5
ENST00000554964.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
ENST00000611135.1
CDS-3UTR CAA 90 bp GAGACCACATCTCAGAGCACCGTCTGTGAACCTAGCCTAAGGTGCTTTTGTGAGCACATGGATGTGTCTTaGGAGCACACTTCAGGCAAC +
Preference number: 5 (lower is better)
Translates to: ETTSQSTVCEPSLRCFCEHMDVS*EHTSGN
Trigger: GTTGCCTGAAGTGTGCTCCAAAGACACATCCATGTG...CTCACAAAAGCACCTTAGGCTAGGTTCACAGACGGTGCTCTGAGATGTGGTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000338904.7
ENST00000404716.7
ENST00000429244.6
ENST00000553541.5
ENST00000553706.5
ENST00000554964.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
ENST00000611135.1
CDS-3UTR CAA 90 bp CAGGCAACCATTTCCTTTTCCTCTTGGTGCTGGTCATCCTTCCACTGCAGGCATCACATGGATGTGTCTTaGGAGCACACTTCAGGCAAC +
Preference number: 5 (lower is better)
Translates to: QATISFSSWCWSSFHCRHHMDVS*EHTSGN
Trigger: GTTGCCTGAAGTGTGCTCCAAAGACACATCCATGTG...ATGCCTGCAGTGGAAGGATGACCAGCACCAAGAGGAAAAGGAAATGGTTGCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000338904.7
ENST00000404716.7
ENST00000429244.6
ENST00000553541.5
ENST00000553706.5
ENST00000554964.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
ENST00000611135.1
CDS-3UTR CAA 90 bp TCAGGCAACCATTTCCTTTTCCTCTTGGTGCTGGTCATCCTTCCACTGCAGGCACACATGGATGTGTCTTaGGAGCACACTTCAGGCAAC +
Preference number: 5 (lower is better)
Translates to: SGNHFLFLLVLVILPLQAHMDVS*EHTSGN
Trigger: GTTGCCTGAAGTGTGCTCCAAAGACACATCCATGTG...TGCCTGCAGTGGAAGGATGACCAGCACCAAGAGGAAAAGGAAATGGTTGCCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000338904.7
ENST00000404716.7
ENST00000429244.6
ENST00000553541.5
ENST00000553706.5
ENST00000554964.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
ENST00000611135.1
CDS-3UTR CAA 90 bp GCTGGTCATCCTTCCACTGCAGGCATCTGTATCCGTAACACATTCAAGGCATGCCACATGGATGTGTCTTaGGAGCACACTTCAGGCAAC +
Preference number: 5 (lower is better)
Translates to: AGHPSTAGICIRNTFKACHMDVS*EHTSGN
Trigger: GTTGCCTGAAGTGTGCTCCAAAGACACATCCATGTG...GCATGCCTTGAATGTGTTACGGATACAGATGCCTGCAGTGGAAGGATGACCAGC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000338904.7
ENST00000404716.7
ENST00000429244.6
ENST00000553541.5
ENST00000553706.5
ENST00000554964.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
ENST00000611135.1
CDS-3UTR CAA 90 bp GCTGGTCATCCTTCCACTGCAGGCATCTGTATCCGTAACACATTCAAGGCATGCAGCCTCTGCAACATCTaGATCTGTGGAATGCAGGCT +
Preference number: 5 (lower is better)
Translates to: AGHPSTAGICIRNTFKACSLCNI*ICGMQA
Trigger: AGCCTGCATTCCACAGATCAAGATGTTGCAGAGGCT...GCATGCCTTGAATGTGTTACGGATACAGATGCCTGCAGTGGAAGGATGACCAGC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000404716.7
ENST00000553706.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
CDS GCA 90 bp AGGTCAGAGAGCTCGGAACATACTCTCACAAGAACGCGGAGCCTCTaGAACATCTTGATCTGTGGAATGCAGGCTTCTTGGTTTTTCCTC +
Preference number: 5 (lower is better)
Translates to: RSESSEHTLTRTRSL*NILICGMQASWFFL
Trigger: GAGGAAAAACCAAGAAGCCTGCATTCCACAGATCAAGATGTTGCAGAGGCTCCGCGTTCTTGTGAGAGTATGTTCCGAGCTCTCTGACCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000404716.7
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
CDS-3UTR CAA 90 bp GAGACCACATCTCAGAGCACCGTCTGTGAACCTAGCCTAAGGTGCTTTTGTGAGGTTGACTCACAGAAGTaGGAAGTCCAAGAGGTAGAG +
Preference number: 5 (lower is better)
Translates to: ETTSQSTVCEPSLRCFCEVDSQK*EVQEVE
Trigger: CTCTACCTCTTGGACTTCCAACTTCTGTGAGTCAAC...CTCACAAAAGCACCTTAGGCTAGGTTCACAGACGGTGCTCTGAGATGTGGTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000338904.7
ENST00000404716.7
ENST00000429244.6
ENST00000553541.5
ENST00000553706.5
ENST00000554964.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
CDS-3UTR CAA 90 bp TCAGGCAACCATTTCCTTTTCCTCTTGGTGCTGGTCATCCTTCCACTGCAGGCAGCAAGAGGCACTATGTaGACTCACAGAAGTTGGAAG +
Preference number: 5 (lower is better)
Translates to: SGNHFLFLLVLVILPLQAARGTM*THRSWK
Trigger: CTTCCAACTTCTGTGAGTCAACATAGTGCCTCTTGC...TGCCTGCAGTGGAAGGATGACCAGCACCAAGAGGAAAAGGAAATGGTTGCCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000338904.7
ENST00000404716.7
ENST00000429244.6
ENST00000553541.5
ENST00000553706.5
ENST00000554964.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
CDS-3UTR CAA 90 bp GCTGGTCATCCTTCCACTGCAGGCATCTGTATCCGTAACACATTCAAGGCATGCGCAAGAGGCACTATGTaGACTCACAGAAGTTGGAAG +
Preference number: 5 (lower is better)
Translates to: AGHPSTAGICIRNTFKACARGTM*THRSWK
Trigger: CTTCCAACTTCTGTGAGTCAACATAGTGCCTCTTGC...GCATGCCTTGAATGTGTTACGGATACAGATGCCTGCAGTGGAAGGATGACCAGC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000338904.7
ENST00000404716.7
ENST00000429244.6
ENST00000553541.5
ENST00000553706.5
ENST00000554964.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
CDS-3UTR CAA 90 bp CAGGCAACCATTTCCTTTTCCTCTTGGTGCTGGTCATCCTTCCACTGCAGGCATGCAAGAGGCACTATGTaGACTCACAGAAGTTGGAAG +
Preference number: 5 (lower is better)
Translates to: QATISFSSWCWSSFHCRHARGTM*THRSWK
Trigger: CTTCCAACTTCTGTGAGTCAACATAGTGCCTCTTGC...ATGCCTGCAGTGGAAGGATGACCAGCACCAAGAGGAAAAGGAAATGGTTGCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000338904.7
ENST00000404716.7
ENST00000429244.6
ENST00000553541.5
ENST00000553706.5
ENST00000554964.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
CDS-3UTR CAA 90 bp CTGCAGGCATCTGTATCCGTAACACATTCAAGGCATGCTAACTTAGGGGACCTGATCTGTATCCACCTCTaGAAACTGCACCAGCTGCAG +
Preference number: 5 (lower is better)
Translates to: LQASVSVTHSRHANLGDLICIHL*KLHQLQ
Trigger: CTGCAGCTGGTGCAGTTTCAAGAGGTGGATACAGAT...CAGGTCCCCTAAGTTAGCATGCCTTGAATGTGTTACGGATACAGATGCCTGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000338904.7
ENST00000404716.7
ENST00000429244.6
ENST00000553541.5
ENST00000553706.5
ENST00000554964.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
ENST00000611135.1
CDS-3UTR CAA 90 bp TTGGTGCTGGTCATCCTTCCACTGCAGGCATCTGTATCCGTAACACATTCAAGGCTTTTGACTTTTTCTTaGGTAGGTGGTCTGGCGGGC +
Preference number: 5 (lower is better)
Translates to: LVLVILPLQASVSVTHSRLLTFS*VGGLAG
Trigger: GCCCGCCAGACCACCTACCAAAGAAAAAGTCAAAAG...CCTTGAATGTGTTACGGATACAGATGCCTGCAGTGGAAGGATGACCAGCACCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000338904.7
ENST00000404716.7
ENST00000429244.6
ENST00000553541.5
ENST00000553706.5
ENST00000554964.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
ENST00000611135.1
CDS-3UTR CAA 90 bp ACATCTCAGAGCACCGTCTGTGAACCTAGCCTAAGGTGCTTTTGTGAGGTGTTGCTTTTGACTTTTTCTTaGGTAGGTGGTCTGGCGGGC +
Preference number: 5 (lower is better)
Translates to: TSQSTVCEPSLRCFCEVLLLTFS*VGGLAG
Trigger: GCCCGCCAGACCACCTACCAAAGAAAAAGTCAAAAG...CAACACCTCACAAAAGCACCTTAGGCTAGGTTCACAGACGGTGCTCTGAGATGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 11 transcripts:
ENST00000338904.7
ENST00000404716.7
ENST00000429244.6
ENST00000553541.5
ENST00000553706.5
ENST00000554964.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
ENST00000611135.1
CDS-3UTR CAA 90 bp CTGCAGGCATCTGTATCCGTAACACATTCAAGGCATGCTAACTTAGGGGACCTGAGCCTCTGCAACATCTaGATCTGTGGAATGCAGGCT +
Preference number: 5 (lower is better)
Translates to: LQASVSVTHSRHANLGDLSLCNI*ICGMQA
Trigger: AGCCTGCATTCCACAGATCAAGATGTTGCAGAGGCT...CAGGTCCCCTAAGTTAGCATGCCTTGAATGTGTTACGGATACAGATGCCTGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000404716.7
ENST00000553706.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
CDS-3UTR CAA 90 bp TTGGTGCTGGTCATCCTTCCACTGCAGGCATCTGTATCCGTAACACATTCAAGGAGCCTCTGCAACATCTaGATCTGTGGAATGCAGGCT +
Preference number: 5 (lower is better)
Translates to: LVLVILPLQASVSVTHSRSLCNI*ICGMQA
Trigger: AGCCTGCATTCCACAGATCAAGATGTTGCAGAGGCT...CCTTGAATGTGTTACGGATACAGATGCCTGCAGTGGAAGGATGACCAGCACCAA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000404716.7
ENST00000553706.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
CDS-3UTR CAA 90 bp AGGCATGCTAACTTAGGGGACCTGCATGAGACCACATCTCAGAGCACCGTCTGTAAAGAAAGGTGGGTGTaGGGGAACACATCAGAAAGT +
Preference number: 5 (lower is better)
Translates to: RHANLGDLHETTSQSTVCKERWV*GNTSES
Trigger: ACTTTCTGATGTGTTCCCCAACACCCACCTTTCTTT...ACAGACGGTGCTCTGAGATGTGGTCTCATGCAGGTCCCCTAAGTTAGCATGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000555230.5
ENST00000557068.5
CDS-3UTR CAA 90 bp GAGACCACATCTCAGAGCACCGTCTGTGAACCTAGCCTAAGGTGCTTTTGTGAGCAGTTATGCCACATGTaGCTGTTCTGGGCTCTAAGA +
Preference number: 5 (lower is better)
Translates to: ETTSQSTVCEPSLRCFCEQLCHM*LFWALR
Trigger: TCTTAGAGCCCAGAACAGCAACATGTGGCATAACTG...CTCACAAAAGCACCTTAGGCTAGGTTCACAGACGGTGCTCTGAGATGTGGTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555230.5
ENST00000557068.5
CDS TCA 90 bp TGCAGACATGTCATCAGTGTCCTCCAGGAAGTCTCTTCAAAAGAGTaGTCCCATGGTGACAGGTCAGAGAGCTCGGAACATACTCTCACA +
Preference number: 5 (lower is better)
Translates to: CRHVISVLQEVSSKE*SHGDRSESSEHTLT
Trigger: TGTGAGAGTATGTTCCGAGCTCTCTGACCTGTCACCATGGGATCACTCTTTTGAAGAGACTTCCTGGAGGACACTGATGACATGTCTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404716.7
ENST00000556208.5
ENST00000611135.1
CDS-3UTR CAA 90 bp TTGGTGCTGGTCATCCTTCCACTGCAGGCATCTGTATCCGTAACACATTCAAGGGTTGACTCACAGAAGTaGGAAGTCCAAGAGGTAGAG +
Preference number: 5 (lower is better)
Translates to: LVLVILPLQASVSVTHSRVDSQK*EVQEVE
Trigger: CTCTACCTCTTGGACTTCCAACTTCTGTGAGTCAAC...CCTTGAATGTGTTACGGATACAGATGCCTGCAGTGGAAGGATGACCAGCACCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000338904.7
ENST00000404716.7
ENST00000429244.6
ENST00000553541.5
ENST00000553706.5
ENST00000554964.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
CDS-3UTR CAA 90 bp TTGGTGCTGGTCATCCTTCCACTGCAGGCATCTGTATCCGTAACACATTCAAGGGCAAGAGGCACTATGTaGACTCACAGAAGTTGGAAG +
Preference number: 5 (lower is better)
Translates to: LVLVILPLQASVSVTHSRARGTM*THRSWK
Trigger: CTTCCAACTTCTGTGAGTCAACATAGTGCCTCTTGC...CCTTGAATGTGTTACGGATACAGATGCCTGCAGTGGAAGGATGACCAGCACCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000338904.7
ENST00000404716.7
ENST00000429244.6
ENST00000553541.5
ENST00000553706.5
ENST00000554964.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
CDS-3UTR CAA 90 bp AGGCATGCTAACTTAGGGGACCTGCATGAGACCACATCTCAGAGCACCGTCTGTCCTTCTACAAGACCTTaGCTCCTGTTACATTTCCTA +
Preference number: 5 (lower is better)
Translates to: RHANLGDLHETTSQSTVCPSTRP*LLLHFL
Trigger: TAGGAAATGTAACAGGAGCAAAGGTCTTGTAGAAGG...ACAGACGGTGCTCTGAGATGTGGTCTCATGCAGGTCCCCTAAGTTAGCATGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000338904.7
ENST00000404716.7
ENST00000429244.6
ENST00000553541.5
ENST00000553706.5
ENST00000554964.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
ENST00000611135.1
CDS-3UTR CAA 90 bp CAGGCAACCATTTCCTTTTCCTCTTGGTGCTGGTCATCCTTCCACTGCAGGCATTGGAATGCAGGCTTCTaGGTTTTTCCTCAGTTCTCA +
Preference number: 5 (lower is better)
Translates to: QATISFSSWCWSSFHCRHWNAGF*VFPQFS
Trigger: TGAGAACTGAGGAAAAACCAAGAAGCCTGCATTCCA...ATGCCTGCAGTGGAAGGATGACCAGCACCAAGAGGAAAAGGAAATGGTTGCCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000404716.7
ENST00000553541.5
ENST00000553706.5
ENST00000554964.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
CDS-3UTR CAA 90 bp TCAGGCAACCATTTCCTTTTCCTCTTGGTGCTGGTCATCCTTCCACTGCAGGCATGGAATGCAGGCTTCTaGGTTTTTCCTCAGTTCTCA +
Preference number: 5 (lower is better)
Translates to: SGNHFLFLLVLVILPLQAWNAGF*VFPQFS
Trigger: TGAGAACTGAGGAAAAACCAAGAAGCCTGCATTCCA...TGCCTGCAGTGGAAGGATGACCAGCACCAAGAGGAAAAGGAAATGGTTGCCTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000404716.7
ENST00000553541.5
ENST00000553706.5
ENST00000554964.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
CDS-3UTR CAA 90 bp GAGACCACATCTCAGAGCACCGTCTGTGAACCTAGCCTAAGGTGCTTTTGTGAGAAAGAAAGGTGGGTGTaGGGGAACACATCAGAAAGT +
Preference number: 5 (lower is better)
Translates to: ETTSQSTVCEPSLRCFCEKERWV*GNTSES
Trigger: ACTTTCTGATGTGTTCCCCAACACCCACCTTTCTTT...CTCACAAAAGCACCTTAGGCTAGGTTCACAGACGGTGCTCTGAGATGTGGTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000555230.5
ENST00000557068.5
CDS-3UTR CAA 90 bp AGGCATGCTAACTTAGGGGACCTGCATGAGACCACATCTCAGAGCACCGTCTGTAAGGAAGGTTCAAGTTaGAGCAGCTGGGATAAATAC +
Preference number: 5 (lower is better)
Translates to: RHANLGDLHETTSQSTVCKEGSS*SSWDKY
Trigger: GTATTTATCCCAGCTGCTCAAACTTGAACCTTCCTT...ACAGACGGTGCTCTGAGATGTGGTCTCATGCAGGTCCCCTAAGTTAGCATGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555230.5
ENST00000557068.5
CDS-3UTR CAA 90 bp GCTGGTCATCCTTCCACTGCAGGCATCTGTATCCGTAACACATTCAAGGCATGCTTCCCTTTCCAGGAGTaGAGAACTTGCTCTGAAAAG +
Preference number: 5 (lower is better)
Translates to: AGHPSTAGICIRNTFKACFPFQE*RTCSEK
Trigger: CTTTTCAGAGCAAGTTCTCAACTCCTGGAAAGGGAA...GCATGCCTTGAATGTGTTACGGATACAGATGCCTGCAGTGGAAGGATGACCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555230.5
ENST00000557068.5
CDS-3UTR CAA 90 bp ACATCTCAGAGCACCGTCTGTGAACCTAGCCTAAGGTGCTTTTGTGAGGTGTTGCAGTTATGCCACATGTaGCTGTTCTGGGCTCTAAGA +
Preference number: 5 (lower is better)
Translates to: TSQSTVCEPSLRCFCEVLQLCHM*LFWALR
Trigger: TCTTAGAGCCCAGAACAGCAACATGTGGCATAACTG...CAACACCTCACAAAAGCACCTTAGGCTAGGTTCACAGACGGTGCTCTGAGATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555230.5
ENST00000557068.5
CDS TCA 90 bp TTTCACACTGTCATCAGTGTCCTCCAGGAAGTCTCTTCAAAAGAGTaGTCCCATGGTGACAGGTCAGAGAGCTCGGAACATACTCTCACA +
Preference number: 5 (lower is better)
Translates to: FHTVISVLQEVSSKE*SHGDRSESSEHTLT
Trigger: TGTGAGAGTATGTTCCGAGCTCTCTGACCTGTCACCATGGGATCACTCTTTTGAAGAGACTTCCTGGAGGACACTGATGACAGTGTGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555230.5
ENST00000557068.5
CDS-3UTR CAA 90 bp CAGGCATCTGTATCCGTAACACATTCAAGGCATGCTAACTTAGGGGACCTGCATGTTGACTCACAGAAGTaGGAAGTCCAAGAGGTAGAG +
Preference number: 5 (lower is better)
Translates to: QASVSVTHSRHANLGDLHVDSQK*EVQEVE
Trigger: CTCTACCTCTTGGACTTCCAACTTCTGTGAGTCAAC...ATGCAGGTCCCCTAAGTTAGCATGCCTTGAATGTGTTACGGATACAGATGCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000338904.7
ENST00000404716.7
ENST00000429244.6
ENST00000553541.5
ENST00000553706.5
ENST00000554964.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
CDS-3UTR CAA 90 bp GAGACCACATCTCAGAGCACCGTCTGTGAACCTAGCCTAAGGTGCTTTTGTGAGCCTTCTACAAGACCTTaGCTCCTGTTACATTTCCTA +
Preference number: 5 (lower is better)
Translates to: ETTSQSTVCEPSLRCFCEPSTRP*LLLHFL
Trigger: TAGGAAATGTAACAGGAGCAAAGGTCTTGTAGAAGG...CTCACAAAAGCACCTTAGGCTAGGTTCACAGACGGTGCTCTGAGATGTGGTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000338904.7
ENST00000404716.7
ENST00000429244.6
ENST00000553541.5
ENST00000553706.5
ENST00000554964.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
ENST00000611135.1
CDS-3UTR CAA 90 bp TCAGGCAACCATTTCCTTTTCCTCTTGGTGCTGGTCATCCTTCCACTGCAGGCACCTTCTACAAGACCTTaGCTCCTGTTACATTTCCTA +
Preference number: 5 (lower is better)
Translates to: SGNHFLFLLVLVILPLQAPSTRP*LLLHFL
Trigger: TAGGAAATGTAACAGGAGCAAAGGTCTTGTAGAAGG...TGCCTGCAGTGGAAGGATGACCAGCACCAAGAGGAAAAGGAAATGGTTGCCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000338904.7
ENST00000404716.7
ENST00000429244.6
ENST00000553541.5
ENST00000553706.5
ENST00000554964.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
ENST00000611135.1
CDS-3UTR CAA 90 bp TTGGTGCTGGTCATCCTTCCACTGCAGGCATCTGTATCCGTAACACATTCAAGGTGGAATGCAGGCTTCTaGGTTTTTCCTCAGTTCTCA +
Preference number: 5 (lower is better)
Translates to: LVLVILPLQASVSVTHSRWNAGF*VFPQFS
Trigger: TGAGAACTGAGGAAAAACCAAGAAGCCTGCATTCCA...CCTTGAATGTGTTACGGATACAGATGCCTGCAGTGGAAGGATGACCAGCACCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000404716.7
ENST00000553541.5
ENST00000553706.5
ENST00000554964.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
CDS-3UTR CAA 90 bp CAGGCATCTGTATCCGTAACACATTCAAGGCATGCTAACTTAGGGGACCTGCATGTAGAGACAGGAAAGTaGAGCATAGGAGTGCAGAGA +
Preference number: 5 (lower is better)
Translates to: QASVSVTHSRHANLGDLHVETGK*SIGVQR
Trigger: TCTCTGCACTCCTATGCTCAACTTTCCTGTCTCTAC...ATGCAGGTCCCCTAAGTTAGCATGCCTTGAATGTGTTACGGATACAGATGCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555230.5
ENST00000557068.5
CDS-3UTR CAA 90 bp TTAGGGGACCTGCATGAGACCACATCTCAGAGCACCGTCTGTGAACCTAGCCTATCTTTCTTTCTCCTCTaGCCCTTATTTGACCATAGA +
Preference number: 5 (lower is better)
Translates to: LGDLHETTSQSTVCEPSLSFFLL*PLFDHR
Trigger: TCTATGGTCAAATAAGGGCAAGAGGAGAAAGAAAGA...TAGGCTAGGTTCACAGACGGTGCTCTGAGATGTGGTCTCATGCAGGTCCCCTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555230.5
ENST00000557068.5
CDS GCA 90 bp CAGGGGCAGTGGGTGTGTGGTGATGAGAGTTCTCATCATTTTTCCTaGAGACACTTAAATGCAAGAGGCACTATGTTGACTCACAGAAGT +
Preference number: 5 (lower is better)
Translates to: QGQWVCGDESSHHFS*RHLNARGTMLTHRS
Trigger: ACTTCTGTGAGTCAACATAGTGCCTCTTGCATTTAAGTGTCTGCAGGAAAAATGATGAGAACTCTCATCACCACACACCCACTGCCCCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000338904.7
CDS-3UTR CAA 90 bp ACTAGAGAATCACATGGATGTGTCTTTGGAGCACACTTCAGGCAACCATTTCCTCTTTTGACTTTTTCTTaGGTAGGTGGTCTGGCGGGC +
Preference number: 5 (lower is better)
Translates to: TRESHGCVFGAHFRQPFPLLTFS*VGGLAG
Trigger: GCCCGCCAGACCACCTACCAAAGAAAAAGTCAAAAG...AGGAAATGGTTGCCTGAAGTGTGCTCCAAAGACACATCCATGTGATTCTCTAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000338904.7
ENST00000404716.7
ENST00000429244.6
ENST00000553541.5
ENST00000553706.5
ENST00000554964.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
ENST00000611135.1
CDS-3UTR CAA 90 bp CAGGCAACCATTTCCTTTTCCTCTTGGTGCTGGTCATCCTTCCACTGCAGGCATTTGGAGCTCGTCATATaGCATAAGAAGGAAGTAATG +
Preference number: 5 (lower is better)
Translates to: QATISFSSWCWSSFHCRHLELVI*HKKEVM
Trigger: CATTACTTCCTTCTTATGCAATATGACGAGCTCCAA...ATGCCTGCAGTGGAAGGATGACCAGCACCAAGAGGAAAAGGAAATGGTTGCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000338904.7
ENST00000404716.7
ENST00000429244.6
ENST00000553541.5
ENST00000553706.5
ENST00000554964.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
ENST00000611135.1
CDS-3UTR CAA 90 bp TCAGGCAACCATTTCCTTTTCCTCTTGGTGCTGGTCATCCTTCCACTGCAGGCATTGGAGCTCGTCATATaGCATAAGAAGGAAGTAATG +
Preference number: 5 (lower is better)
Translates to: SGNHFLFLLVLVILPLQALELVI*HKKEVM
Trigger: CATTACTTCCTTCTTATGCAATATGACGAGCTCCAA...TGCCTGCAGTGGAAGGATGACCAGCACCAAGAGGAAAAGGAAATGGTTGCCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000338904.7
ENST00000404716.7
ENST00000429244.6
ENST00000553541.5
ENST00000553706.5
ENST00000554964.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
ENST00000611135.1
CDS-3UTR CAA 90 bp ACATCTCAGAGCACCGTCTGTGAACCTAGCCTAAGGTGCTTTTGTGAGGTGTTGCCTTCTACAAGACCTTaGCTCCTGTTACATTTCCTA +
Preference number: 5 (lower is better)
Translates to: TSQSTVCEPSLRCFCEVLPSTRP*LLLHFL
Trigger: TAGGAAATGTAACAGGAGCAAAGGTCTTGTAGAAGG...CAACACCTCACAAAAGCACCTTAGGCTAGGTTCACAGACGGTGCTCTGAGATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000338904.7
ENST00000404716.7
ENST00000429244.6
ENST00000553541.5
ENST00000553706.5
ENST00000554964.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
ENST00000611135.1
CDS-3UTR CAA 90 bp CTGCAGGCATCTGTATCCGTAACACATTCAAGGCATGCTAACTTAGGGGACCTGCCTTCTACAAGACCTTaGCTCCTGTTACATTTCCTA +
Preference number: 5 (lower is better)
Translates to: LQASVSVTHSRHANLGDLPSTRP*LLLHFL
Trigger: TAGGAAATGTAACAGGAGCAAAGGTCTTGTAGAAGG...CAGGTCCCCTAAGTTAGCATGCCTTGAATGTGTTACGGATACAGATGCCTGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000338904.7
ENST00000404716.7
ENST00000429244.6
ENST00000553541.5
ENST00000553706.5
ENST00000554964.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
ENST00000611135.1
CDS-3UTR CAA 90 bp ACTAGAGAATCACATGGATGTGTCTTTGGAGCACACTTCAGGCAACCATTTCCTCACATGGATGTGTCTTaGGAGCACACTTCAGGCAAC +
Preference number: 5 (lower is better)
Translates to: TRESHGCVFGAHFRQPFPHMDVS*EHTSGN
Trigger: GTTGCCTGAAGTGTGCTCCAAAGACACATCCATGTG...AGGAAATGGTTGCCTGAAGTGTGCTCCAAAGACACATCCATGTGATTCTCTAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000338904.7
ENST00000404716.7
ENST00000429244.6
ENST00000553541.5
ENST00000553706.5
ENST00000554964.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
ENST00000611135.1
CDS-3UTR CAA 90 bp CAGGCATCTGTATCCGTAACACATTCAAGGCATGCTAACTTAGGGGACCTGCATTGGAATGCAGGCTTCTaGGTTTTTCCTCAGTTCTCA +
Preference number: 5 (lower is better)
Translates to: QASVSVTHSRHANLGDLHWNAGF*VFPQFS
Trigger: TGAGAACTGAGGAAAAACCAAGAAGCCTGCATTCCA...ATGCAGGTCCCCTAAGTTAGCATGCCTTGAATGTGTTACGGATACAGATGCCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000404716.7
ENST00000553541.5
ENST00000553706.5
ENST00000554964.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
CDS-3UTR CAA 90 bp ACTAGAGAATCACATGGATGTGTCTTTGGAGCACACTTCAGGCAACCATTTCCTGTTGACTCACAGAAGTaGGAAGTCCAAGAGGTAGAG +
Preference number: 5 (lower is better)
Translates to: TRESHGCVFGAHFRQPFPVDSQK*EVQEVE
Trigger: CTCTACCTCTTGGACTTCCAACTTCTGTGAGTCAAC...AGGAAATGGTTGCCTGAAGTGTGCTCCAAAGACACATCCATGTGATTCTCTAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000338904.7
ENST00000404716.7
ENST00000429244.6
ENST00000553541.5
ENST00000553706.5
ENST00000554964.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
CDS-3UTR CAA 90 bp ACTAGAGAATCACATGGATGTGTCTTTGGAGCACACTTCAGGCAACCATTTCCTGCAAGAGGCACTATGTaGACTCACAGAAGTTGGAAG +
Preference number: 5 (lower is better)
Translates to: TRESHGCVFGAHFRQPFPARGTM*THRSWK
Trigger: CTTCCAACTTCTGTGAGTCAACATAGTGCCTCTTGC...AGGAAATGGTTGCCTGAAGTGTGCTCCAAAGACACATCCATGTGATTCTCTAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000338904.7
ENST00000404716.7
ENST00000429244.6
ENST00000553541.5
ENST00000553706.5
ENST00000554964.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
CDS-3UTR CAA 90 bp TCTATAAGGATCAGTATGGAGAGAAATATTCCTCCCACCCTAAGCTCTCAGAGAATCTGTATCCACCTCTaGAAACTGCACCAGCTGCAG +
Preference number: 5 (lower is better)
Translates to: SIRISMERNIPPTLSSQRICIHL*KLHQLQ
Trigger: CTGCAGCTGGTGCAGTTTCAAGAGGTGGATACAGAT...TCTCTGAGAGCTTAGGGTGGGAGGAATATTTCTCTCCATACTGATCCTTATAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000338904.7
ENST00000404716.7
ENST00000429244.6
ENST00000553541.5
ENST00000553706.5
ENST00000554964.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
ENST00000611135.1
CDS-3UTR CAA 90 bp TCTATAAGGATCAGTATGGAGAGAAATATTCCTCCCACCCTAAGCTCTCAGAGACTTTTGACTTTTTCTTaGGTAGGTGGTCTGGCGGGC +
Preference number: 5 (lower is better)
Translates to: SIRISMERNIPPTLSSQRLLTFS*VGGLAG
Trigger: GCCCGCCAGACCACCTACCAAAGAAAAAGTCAAAAG...TCTCTGAGAGCTTAGGGTGGGAGGAATATTTCTCTCCATACTGATCCTTATAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000338904.7
ENST00000404716.7
ENST00000429244.6
ENST00000553541.5
ENST00000553706.5
ENST00000554964.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
ENST00000611135.1
CDS-3UTR CAA 90 bp TCAGGCAACCATTTCCTTTTCCTCTTGGTGCTGGTCATCCTTCCACTGCAGGCAATAAGGACACGTCTTTaGACTTTTTCTTTGGTAGGT +
Preference number: 5 (lower is better)
Translates to: SGNHFLFLLVLVILPLQAIRTRL*TFSLVG
Trigger: ACCTACCAAAGAAAAAGTCAAAAGACGTGTCCTTAT...TGCCTGCAGTGGAAGGATGACCAGCACCAAGAGGAAAAGGAAATGGTTGCCTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000338904.7
ENST00000404716.7
ENST00000429244.6
ENST00000553541.5
ENST00000553706.5
ENST00000554964.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
ENST00000611135.1
CDS-3UTR CAA 90 bp CAGGCAACCATTTCCTTTTCCTCTTGGTGCTGGTCATCCTTCCACTGCAGGCATATAAGGACACGTCTTTaGACTTTTTCTTTGGTAGGT +
Preference number: 5 (lower is better)
Translates to: QATISFSSWCWSSFHCRHIRTRL*TFSLVG
Trigger: ACCTACCAAAGAAAAAGTCAAAAGACGTGTCCTTAT...ATGCCTGCAGTGGAAGGATGACCAGCACCAAGAGGAAAAGGAAATGGTTGCCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000338904.7
ENST00000404716.7
ENST00000429244.6
ENST00000553541.5
ENST00000553706.5
ENST00000554964.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
ENST00000611135.1
CDS-3UTR CAA 90 bp GCTGGTCATCCTTCCACTGCAGGCATCTGTATCCGTAACACATTCAAGGCATGCATAAGGACACGTCTTTaGACTTTTTCTTTGGTAGGT +
Preference number: 5 (lower is better)
Translates to: AGHPSTAGICIRNTFKACIRTRL*TFSLVG
Trigger: ACCTACCAAAGAAAAAGTCAAAAGACGTGTCCTTAT...GCATGCCTTGAATGTGTTACGGATACAGATGCCTGCAGTGGAAGGATGACCAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000338904.7
ENST00000404716.7
ENST00000429244.6
ENST00000553541.5
ENST00000553706.5
ENST00000554964.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
ENST00000611135.1
CDS-3UTR CAA 90 bp TTGGTGCTGGTCATCCTTCCACTGCAGGCATCTGTATCCGTAACACATTCAAGGTTGGAGCTCGTCATATaGCATAAGAAGGAAGTAATG +
Preference number: 5 (lower is better)
Translates to: LVLVILPLQASVSVTHSRLELVI*HKKEVM
Trigger: CATTACTTCCTTCTTATGCAATATGACGAGCTCCAA...CCTTGAATGTGTTACGGATACAGATGCCTGCAGTGGAAGGATGACCAGCACCAA
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000338904.7
ENST00000404716.7
ENST00000429244.6
ENST00000553541.5
ENST00000553706.5
ENST00000554964.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
ENST00000611135.1
CDS-3UTR CAA 90 bp CTGCAGGCATCTGTATCCGTAACACATTCAAGGCATGCTAACTTAGGGGACCTGTTGGAGCTCGTCATATaGCATAAGAAGGAAGTAATG +
Preference number: 5 (lower is better)
Translates to: LQASVSVTHSRHANLGDLLELVI*HKKEVM
Trigger: CATTACTTCCTTCTTATGCAATATGACGAGCTCCAA...CAGGTCCCCTAAGTTAGCATGCCTTGAATGTGTTACGGATACAGATGCCTGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000338904.7
ENST00000404716.7
ENST00000429244.6
ENST00000553541.5
ENST00000553706.5
ENST00000554964.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
ENST00000611135.1
CDS-3UTR CAA 90 bp TCTATAAGGATCAGTATGGAGAGAAATATTCCTCCCACCCTAAGCTCTCAGAGATCCTCTTGCCCTTATTaGACCATAGATGCCCTTGGG +
Preference number: 5 (lower is better)
Translates to: SIRISMERNIPPTLSSQRSSCPY*TIDALG
Trigger: CCCAAGGGCATCTATGGTCAAATAAGGGCAAGAGGA...TCTCTGAGAGCTTAGGGTGGGAGGAATATTTCTCTCCATACTGATCCTTATAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555230.5
ENST00000557068.5
CDS-3UTR CAA 90 bp ACATCTCAGAGCACCGTCTGTGAACCTAGCCTAAGGTGCTTTTGTGAGGTGTTGATAAGGACACGTCTTTaGACTTTTTCTTTGGTAGGT +
Preference number: 5 (lower is better)
Translates to: TSQSTVCEPSLRCFCEVLIRTRL*TFSLVG
Trigger: ACCTACCAAAGAAAAAGTCAAAAGACGTGTCCTTAT...CAACACCTCACAAAAGCACCTTAGGCTAGGTTCACAGACGGTGCTCTGAGATGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000338904.7
ENST00000404716.7
ENST00000429244.6
ENST00000553541.5
ENST00000553706.5
ENST00000554964.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
ENST00000611135.1
CDS-3UTR CAA 90 bp TTGGTGCTGGTCATCCTTCCACTGCAGGCATCTGTATCCGTAACACATTCAAGGATAAGGACACGTCTTTaGACTTTTTCTTTGGTAGGT +
Preference number: 5 (lower is better)
Translates to: LVLVILPLQASVSVTHSRIRTRL*TFSLVG
Trigger: ACCTACCAAAGAAAAAGTCAAAAGACGTGTCCTTAT...CCTTGAATGTGTTACGGATACAGATGCCTGCAGTGGAAGGATGACCAGCACCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000338904.7
ENST00000404716.7
ENST00000429244.6
ENST00000553541.5
ENST00000553706.5
ENST00000554964.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
ENST00000611135.1
CDS-3UTR CAA 90 bp CTGCAGGCATCTGTATCCGTAACACATTCAAGGCATGCTAACTTAGGGGACCTGATAAGGACACGTCTTTaGACTTTTTCTTTGGTAGGT +
Preference number: 5 (lower is better)
Translates to: LQASVSVTHSRHANLGDLIRTRL*TFSLVG
Trigger: ACCTACCAAAGAAAAAGTCAAAAGACGTGTCCTTAT...CAGGTCCCCTAAGTTAGCATGCCTTGAATGTGTTACGGATACAGATGCCTGCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000338904.7
ENST00000404716.7
ENST00000429244.6
ENST00000553541.5
ENST00000553706.5
ENST00000554964.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
ENST00000611135.1
CDS-3UTR CAA 90 bp TTCTCAACTTTGATCTATAAGGATCAGTATGGAGAGAAATATTCCTCCCACCCTCTTTTGACTTTTTCTTaGGTAGGTGGTCTGGCGGGC +
Preference number: 5 (lower is better)
Translates to: FSTLIYKDQYGEKYSSHPLLTFS*VGGLAG
Trigger: GCCCGCCAGACCACCTACCAAAGAAAAAGTCAAAAG...AGGGTGGGAGGAATATTTCTCTCCATACTGATCCTTATAGATCAAAGTTGAGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000338904.7
ENST00000404716.7
ENST00000429244.6
ENST00000553541.5
ENST00000553706.5
ENST00000554964.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
ENST00000611135.1
CDS-3UTR CAA 90 bp CAGGCATCTGTATCCGTAACACATTCAAGGCATGCTAACTTAGGGGACCTGCATATAAGGACACGTCTTTaGACTTTTTCTTTGGTAGGT +
Preference number: 5 (lower is better)
Translates to: QASVSVTHSRHANLGDLHIRTRL*TFSLVG
Trigger: ACCTACCAAAGAAAAAGTCAAAAGACGTGTCCTTAT...ATGCAGGTCCCCTAAGTTAGCATGCCTTGAATGTGTTACGGATACAGATGCCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000338904.7
ENST00000404716.7
ENST00000429244.6
ENST00000553541.5
ENST00000553706.5
ENST00000554964.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
ENST00000611135.1
CDS-3UTR CAA 90 bp ACTAGAGAATCACATGGATGTGTCTTTGGAGCACACTTCAGGCAACCATTTCCTCCTTCTACAAGACCTTaGCTCCTGTTACATTTCCTA +
Preference number: 5 (lower is better)
Translates to: TRESHGCVFGAHFRQPFPPSTRP*LLLHFL
Trigger: TAGGAAATGTAACAGGAGCAAAGGTCTTGTAGAAGG...AGGAAATGGTTGCCTGAAGTGTGCTCCAAAGACACATCCATGTGATTCTCTAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000338904.7
ENST00000404716.7
ENST00000429244.6
ENST00000553541.5
ENST00000553706.5
ENST00000554964.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
ENST00000611135.1
CDS-3UTR CAA 90 bp TTCTCAACTTTGATCTATAAGGATCAGTATGGAGAGAAATATTCCTCCCACCCTCACATGGATGTGTCTTaGGAGCACACTTCAGGCAAC +
Preference number: 5 (lower is better)
Translates to: FSTLIYKDQYGEKYSSHPHMDVS*EHTSGN
Trigger: GTTGCCTGAAGTGTGCTCCAAAGACACATCCATGTG...AGGGTGGGAGGAATATTTCTCTCCATACTGATCCTTATAGATCAAAGTTGAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000338904.7
ENST00000404716.7
ENST00000429244.6
ENST00000553541.5
ENST00000553706.5
ENST00000554964.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
ENST00000611135.1
CDS-3UTR CAA 90 bp TCTATAAGGATCAGTATGGAGAGAAATATTCCTCCCACCCTAAGCTCTCAGAGATGGAATGCAGGCTTCTaGGTTTTTCCTCAGTTCTCA +
Preference number: 5 (lower is better)
Translates to: SIRISMERNIPPTLSSQRWNAGF*VFPQFS
Trigger: TGAGAACTGAGGAAAAACCAAGAAGCCTGCATTCCA...TCTCTGAGAGCTTAGGGTGGGAGGAATATTTCTCTCCATACTGATCCTTATAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000404716.7
ENST00000553541.5
ENST00000553706.5
ENST00000554964.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
CDS-3UTR CAA 90 bp ATTTTTATTCTTTCTGCTGAACTAGAGAATCACATGGATGTGTCTTTGGAGCACCTTTTGACTTTTTCTTaGGTAGGTGGTCTGGCGGGC +
Preference number: 5 (lower is better)
Translates to: IFILSAELENHMDVSLEHLLTFS*VGGLAG
Trigger: GCCCGCCAGACCACCTACCAAAGAAAAAGTCAAAAG...GTGCTCCAAAGACACATCCATGTGATTCTCTAGTTCAGCAGAAAGAATAAAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 11 transcripts:
ENST00000338904.7
ENST00000404716.7
ENST00000429244.6
ENST00000553541.5
ENST00000553706.5
ENST00000554964.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
ENST00000611135.1
CDS-3UTR CAA 90 bp TCTATAAGGATCAGTATGGAGAGAAATATTCCTCCCACCCTAAGCTCTCAGAGACCTTCTACAAGACCTTaGCTCCTGTTACATTTCCTA +
Preference number: 5 (lower is better)
Translates to: SIRISMERNIPPTLSSQRPSTRP*LLLHFL
Trigger: TAGGAAATGTAACAGGAGCAAAGGTCTTGTAGAAGG...TCTCTGAGAGCTTAGGGTGGGAGGAATATTTCTCTCCATACTGATCCTTATAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000338904.7
ENST00000404716.7
ENST00000429244.6
ENST00000553541.5
ENST00000553706.5
ENST00000554964.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
ENST00000611135.1
CDS-3UTR CAA 90 bp ATTTTTATTCTTTCTGCTGAACTAGAGAATCACATGGATGTGTCTTTGGAGCACCACATGGATGTGTCTTaGGAGCACACTTCAGGCAAC +
Preference number: 5 (lower is better)
Translates to: IFILSAELENHMDVSLEHHMDVS*EHTSGN
Trigger: GTTGCCTGAAGTGTGCTCCAAAGACACATCCATGTG...GTGCTCCAAAGACACATCCATGTGATTCTCTAGTTCAGCAGAAAGAATAAAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000338904.7
ENST00000404716.7
ENST00000429244.6
ENST00000553541.5
ENST00000553706.5
ENST00000554964.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
ENST00000611135.1
CDS CCA 90 bp TATGACAAAGACACCATCCTCACTGAGGAAACTTCTGTGTTCAGGTaGCTCCACGAGATCATTTATAGTATGAGGAATACGTTTTTGCAT +
Preference number: 5 (lower is better)
Translates to: YDKDTILTEETSVFR*LHEIIYSMRNTFLH
Trigger: ATGCAAAAACGTATTCCTCATACTATAAATGATCTCGTGGAGCCACCTGAACACAGAAGTTTCCTCAGTGAGGATGGTGTCTTTGTCATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000338904.7
ENST00000404716.7
ENST00000429244.6
ENST00000553541.5
ENST00000553706.5
ENST00000554964.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
ENST00000611135.1
CDS-3UTR CAA 90 bp ATTTTTATTCTTTCTGCTGAACTAGAGAATCACATGGATGTGTCTTTGGAGCACGCAAGAGGCACTATGTaGACTCACAGAAGTTGGAAG +
Preference number: 5 (lower is better)
Translates to: IFILSAELENHMDVSLEHARGTM*THRSWK
Trigger: CTTCCAACTTCTGTGAGTCAACATAGTGCCTCTTGC...GTGCTCCAAAGACACATCCATGTGATTCTCTAGTTCAGCAGAAAGAATAAAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000338904.7
ENST00000404716.7
ENST00000429244.6
ENST00000553541.5
ENST00000553706.5
ENST00000554964.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
CDS-3UTR CAA 90 bp AGGTGGGTGATTAAAGTGAATGGAAGCAAAATTACCATTCTCAACTTTGATCTAATCTGTATCCACCTCTaGAAACTGCACCAGCTGCAG +
Preference number: 5 (lower is better)
Translates to: RWVIKVNGSKITILNFDLICIHL*KLHQLQ
Trigger: CTGCAGCTGGTGCAGTTTCAAGAGGTGGATACAGAT...TAGATCAAAGTTGAGAATGGTAATTTTGCTTCCATTCACTTTAATCACCCACCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000338904.7
ENST00000404716.7
ENST00000429244.6
ENST00000553541.5
ENST00000553706.5
ENST00000554964.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
ENST00000611135.1
CDS-3UTR CAA 90 bp AAAGGAAGGTGGGTGATTAAAGTGAATGGAAGCAAAATTACCATTCTCAACTTTATCTGTATCCACCTCTaGAAACTGCACCAGCTGCAG +
Preference number: 5 (lower is better)
Translates to: KGRWVIKVNGSKITILNFICIHL*KLHQLQ
Trigger: CTGCAGCTGGTGCAGTTTCAAGAGGTGGATACAGAT...AAAGTTGAGAATGGTAATTTTGCTTCCATTCACTTTAATCACCCACCTTCCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000338904.7
ENST00000404716.7
ENST00000429244.6
ENST00000553541.5
ENST00000553706.5
ENST00000554964.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
ENST00000611135.1
CDS-3UTR CAA 90 bp AGGTGGGTGATTAAAGTGAATGGAAGCAAAATTACCATTCTCAACTTTGATCTACTTTTGACTTTTTCTTaGGTAGGTGGTCTGGCGGGC +
Preference number: 5 (lower is better)
Translates to: RWVIKVNGSKITILNFDLLLTFS*VGGLAG
Trigger: GCCCGCCAGACCACCTACCAAAGAAAAAGTCAAAAG...TAGATCAAAGTTGAGAATGGTAATTTTGCTTCCATTCACTTTAATCACCCACCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 11 transcripts:
ENST00000338904.7
ENST00000404716.7
ENST00000429244.6
ENST00000553541.5
ENST00000553706.5
ENST00000554964.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
ENST00000611135.1
CDS-3UTR CAA 90 bp AAAGGAAGGTGGGTGATTAAAGTGAATGGAAGCAAAATTACCATTCTCAACTTTCTTTTGACTTTTTCTTaGGTAGGTGGTCTGGCGGGC +
Preference number: 5 (lower is better)
Translates to: KGRWVIKVNGSKITILNFLLTFS*VGGLAG
Trigger: GCCCGCCAGACCACCTACCAAAGAAAAAGTCAAAAG...AAAGTTGAGAATGGTAATTTTGCTTCCATTCACTTTAATCACCCACCTTCCTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 11 transcripts:
ENST00000338904.7
ENST00000404716.7
ENST00000429244.6
ENST00000553541.5
ENST00000553706.5
ENST00000554964.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
ENST00000611135.1
CDS-3UTR CAA 90 bp TCTATAAGGATCAGTATGGAGAGAAATATTCCTCCCACCCTAAGCTCTCAGAGATTGGAGCTCGTCATATaGCATAAGAAGGAAGTAATG +
Preference number: 5 (lower is better)
Translates to: SIRISMERNIPPTLSSQRLELVI*HKKEVM
Trigger: CATTACTTCCTTCTTATGCAATATGACGAGCTCCAA...TCTCTGAGAGCTTAGGGTGGGAGGAATATTTCTCTCCATACTGATCCTTATAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000338904.7
ENST00000404716.7
ENST00000429244.6
ENST00000553541.5
ENST00000553706.5
ENST00000554964.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
ENST00000611135.1
CDS-3UTR CAA 90 bp AGGTGGGTGATTAAAGTGAATGGAAGCAAAATTACCATTCTCAACTTTGATCTACACATGGATGTGTCTTaGGAGCACACTTCAGGCAAC +
Preference number: 5 (lower is better)
Translates to: RWVIKVNGSKITILNFDLHMDVS*EHTSGN
Trigger: GTTGCCTGAAGTGTGCTCCAAAGACACATCCATGTG...TAGATCAAAGTTGAGAATGGTAATTTTGCTTCCATTCACTTTAATCACCCACCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000338904.7
ENST00000404716.7
ENST00000429244.6
ENST00000553541.5
ENST00000553706.5
ENST00000554964.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
ENST00000611135.1
CDS-3UTR CAA 90 bp AGGTGGGTGATTAAAGTGAATGGAAGCAAAATTACCATTCTCAACTTTGATCTAAGCCTCTGCAACATCTaGATCTGTGGAATGCAGGCT +
Preference number: 5 (lower is better)
Translates to: RWVIKVNGSKITILNFDLSLCNI*ICGMQA
Trigger: AGCCTGCATTCCACAGATCAAGATGTTGCAGAGGCT...TAGATCAAAGTTGAGAATGGTAATTTTGCTTCCATTCACTTTAATCACCCACCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000404716.7
ENST00000553706.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
CDS-3UTR CAA 90 bp AGGTGGGTGATTAAAGTGAATGGAAGCAAAATTACCATTCTCAACTTTGATCTAGTTGACTCACAGAAGTaGGAAGTCCAAGAGGTAGAG +
Preference number: 5 (lower is better)
Translates to: RWVIKVNGSKITILNFDLVDSQK*EVQEVE
Trigger: CTCTACCTCTTGGACTTCCAACTTCTGTGAGTCAAC...TAGATCAAAGTTGAGAATGGTAATTTTGCTTCCATTCACTTTAATCACCCACCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000338904.7
ENST00000404716.7
ENST00000429244.6
ENST00000553541.5
ENST00000553706.5
ENST00000554964.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
CDS-3UTR CAA 90 bp ATTTTTATTCTTTCTGCTGAACTAGAGAATCACATGGATGTGTCTTTGGAGCACTGGAATGCAGGCTTCTaGGTTTTTCCTCAGTTCTCA +
Preference number: 5 (lower is better)
Translates to: IFILSAELENHMDVSLEHWNAGF*VFPQFS
Trigger: TGAGAACTGAGGAAAAACCAAGAAGCCTGCATTCCA...GTGCTCCAAAGACACATCCATGTGATTCTCTAGTTCAGCAGAAAGAATAAAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000404716.7
ENST00000553541.5
ENST00000553706.5
ENST00000554964.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
CDS-3UTR CAA 90 bp AGGTGGGTGATTAAAGTGAATGGAAGCAAAATTACCATTCTCAACTTTGATCTAGTAGAGACAGGAAAGTaGAGCATAGGAGTGCAGAGA +
Preference number: 5 (lower is better)
Translates to: RWVIKVNGSKITILNFDLVETGK*SIGVQR
Trigger: TCTCTGCACTCCTATGCTCAACTTTCCTGTCTCTAC...TAGATCAAAGTTGAGAATGGTAATTTTGCTTCCATTCACTTTAATCACCCACCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555230.5
ENST00000557068.5
CDS-3UTR CAA 90 bp ATTTTTATTCTTTCTGCTGAACTAGAGAATCACATGGATGTGTCTTTGGAGCACTTCCCTTTCCAGGAGTaGAGAACTTGCTCTGAAAAG +
Preference number: 5 (lower is better)
Translates to: IFILSAELENHMDVSLEHFPFQE*RTCSEK
Trigger: CTTTTCAGAGCAAGTTCTCAACTCCTGGAAAGGGAA...GTGCTCCAAAGACACATCCATGTGATTCTCTAGTTCAGCAGAAAGAATAAAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000555230.5
ENST00000557068.5
CDS CCA 90 bp TATATGTGTGTAGAAAGGTTAGAGAATGATGGAATTAAAGAAAGGTaGGTGTTGGGGAACACATCAGAAAGTAGAGACAGGAAAGTTGAG +
Preference number: 5 (lower is better)
Translates to: YMCVERLENDGIKER*VLGNTSESRDRKVE
Trigger: CTCAACTTTCCTGTCTCTACTTTCTGATGTGTTCCCCAACACCCACCTTTCTTTAATTCCATCATTCTCTAACCTTTCTACACACATATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555230.5
ENST00000557068.5
CDS-3UTR CAA 90 bp ATTTTTATTCTTTCTGCTGAACTAGAGAATCACATGGATGTGTCTTTGGAGCACCCTTCTACAAGACCTTaGCTCCTGTTACATTTCCTA +
Preference number: 5 (lower is better)
Translates to: IFILSAELENHMDVSLEHPSTRP*LLLHFL
Trigger: TAGGAAATGTAACAGGAGCAAAGGTCTTGTAGAAGG...GTGCTCCAAAGACACATCCATGTGATTCTCTAGTTCAGCAGAAAGAATAAAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000338904.7
ENST00000404716.7
ENST00000429244.6
ENST00000553541.5
ENST00000553706.5
ENST00000554964.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
ENST00000611135.1
CDS-3UTR CAA 90 bp AAAGGAAGGTGGGTGATTAAAGTGAATGGAAGCAAAATTACCATTCTCAACTTTAAGGAAGGTTCAAGTTaGAGCAGCTGGGATAAATAC +
Preference number: 5 (lower is better)
Translates to: KGRWVIKVNGSKITILNFKEGSS*SSWDKY
Trigger: GTATTTATCCCAGCTGCTCAAACTTGAACCTTCCTT...AAAGTTGAGAATGGTAATTTTGCTTCCATTCACTTTAATCACCCACCTTCCTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555230.5
ENST00000557068.5
CDS-3UTR CAA 90 bp ATTTTTATTCTTTCTGCTGAACTAGAGAATCACATGGATGTGTCTTTGGAGCACTCTTTCTTTCTCCTCTaGCCCTTATTTGACCATAGA +
Preference number: 5 (lower is better)
Translates to: IFILSAELENHMDVSLEHSFFLL*PLFDHR
Trigger: TCTATGGTCAAATAAGGGCAAGAGGAGAAAGAAAGA...GTGCTCCAAAGACACATCCATGTGATTCTCTAGTTCAGCAGAAAGAATAAAAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000555230.5
ENST00000557068.5
CDS-3UTR CAA 90 bp ATTTTTATTCTTTCTGCTGAACTAGAGAATCACATGGATGTGTCTTTGGAGCACATAAGGACACGTCTTTaGACTTTTTCTTTGGTAGGT +
Preference number: 5 (lower is better)
Translates to: IFILSAELENHMDVSLEHIRTRL*TFSLVG
Trigger: ACCTACCAAAGAAAAAGTCAAAAGACGTGTCCTTAT...GTGCTCCAAAGACACATCCATGTGATTCTCTAGTTCAGCAGAAAGAATAAAAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 11 transcripts:
ENST00000338904.7
ENST00000404716.7
ENST00000429244.6
ENST00000553541.5
ENST00000553706.5
ENST00000554964.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
ENST00000611135.1
CDS GCA 72 bp AGCTCGGAACATACTCTCACAAGAACGCGGAGCCTCTaGAACATCTTGATCTGTGGAATGCAGGCTTCTTGG +
Preference number: 6 (lower is better)
Translates to: SSEHTLTRTRSL*NILICGMQASW
Trigger: CCAAGAAGCCTGCATTCCACAGATCAAGATGTTGCAGAGGCTCCGCGTTCTTGTGAGAGTATGTTCCGAGCT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000404716.7
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
CDS TCA 72 bp CCTCCAGGAAGTCTCTTCAAAAGAGTGATCCCATGGTaGCAGGTCAGAGAGCTCGGAACATACTCTCACAAG +
Preference number: 6 (lower is better)
Translates to: PPGSLFKRVIPW*QVRELGTYSHK
Trigger: CTTGTGAGAGTATGTTCCGAGCTCTCTGACCTGTCACCATGGGATCACTCTTTTGAAGAGACTTCCTGGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000404716.7
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000611135.1
CDS TCA 72 bp GTCATCAGTGTCCTCCAGGAAGTCTCTTCAAAAGAGTaGTCCCATGGTGACAGGTCAGAGAGCTCGGAACAT +
Preference number: 6 (lower is better)
Translates to: VISVLQEVSSKE*SHGDRSESSEH
Trigger: ATGTTCCGAGCTCTCTGACCTGTCACCATGGGATCACTCTTTTGAAGAGACTTCCTGGAGGACACTGATGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000404716.7
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000611135.1
CDS GCA 72 bp TTTTCCTGCAGACATCTCACAAGAACGCGGAGCCTCTaGAACATCTTGATCTGTGGAATGCAGGCTTCTTGG +
Preference number: 6 (lower is better)
Translates to: FSCRHLTRTRSL*NILICGMQASW
Trigger: CCAAGAAGCCTGCATTCCACAGATCAAGATGTTGCAGAGGCTCCGCGTTCTTGTGAGATGTCTGCAGGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553706.5
ENST00000557209.1
CDS CAA 90 bp AGCTCGGAACATACTCTCACAAGAACGCGGAGCCTCTGCAACATCTaGATCTGTGGAATGCAGGCTTCTTGGTTTTTCCTCAGTTCTCAC +
Preference number: 6 (lower is better)
Translates to: SSEHTLTRTRSLCNI*ICGMQASWFFLSSH
Trigger: GTGAGAACTGAGGAAAAACCAAGAAGCCTGCATTCCACAGATCAAGATGTTGCAGAGGCTCCGCGTTCTTGTGAGAGTATGTTCCGAGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000404716.7
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
CDS TCA 72 bp GCATCTTTTCCCTTTCCAGGAGTTGAGAACTTGCTCTaGAAAGAGCCACCCTCCCCTTTCGAACATTCCACT +
Preference number: 6 (lower is better)
Translates to: ASFPFPGVENLL*KEPPSPFEHST
Trigger: AGTGGAATGTTCGAAAGGGGAGGGTGGCTCTTTTCAGAGCAAGTTCTCAACTCCTGGAAAGGGAAAAGATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000555230.5
ENST00000557068.5
CDS CCA 72 bp TTTCTCCTCTTGCCCTTATTTGACCATAGATGCCCTTaGGGAAGGGGTCAAGGAAGGTTCAAGTTTGAGCAG +
Preference number: 6 (lower is better)
Translates to: FLLLPLFDHRCP*GRGQGRFKFEQ
Trigger: CTGCTCAAACTTGAACCTTCCTTGACCCCTTCCCCAAGGGCATCTATGGTCAAATAAGGGCAAGAGGAGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555230.5
ENST00000557068.5
CDS CAA 72 bp CATACTCTCACAAGAACGCGGAGCCTCTGCAACATCTaGATCTGTGGAATGCAGGCTTCTTGGTTTTTCCTC +
Preference number: 6 (lower is better)
Translates to: HTLTRTRSLCNI*ICGMQASWFFL
Trigger: GAGGAAAAACCAAGAAGCCTGCATTCCACAGATCAAGATGTTGCAGAGGCTCCGCGTTCTTGTGAGAGTATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000404716.7
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
CDS CAA 72 bp AGACATCTCACAAGAACGCGGAGCCTCTGCAACATCTaGATCTGTGGAATGCAGGCTTCTTGGTTTTTCCTC +
Preference number: 6 (lower is better)
Translates to: RHLTRTRSLCNI*ICGMQASWFFL
Trigger: GAGGAAAAACCAAGAAGCCTGCATTCCACAGATCAAGATGTTGCAGAGGCTCCGCGTTCTTGTGAGATGTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000553706.5
ENST00000557209.1
CDS CAA 90 bp TTTTCCTGCAGACATCTCACAAGAACGCGGAGCCTCTGCAACATCTaGATCTGTGGAATGCAGGCTTCTTGGTTTTTCCTCAGTTCTCAC +
Preference number: 6 (lower is better)
Translates to: FSCRHLTRTRSLCNI*ICGMQASWFFLSSH
Trigger: GTGAGAACTGAGGAAAAACCAAGAAGCCTGCATTCCACAGATCAAGATGTTGCAGAGGCTCCGCGTTCTTGTGAGATGTCTGCAGGAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000553706.5
ENST00000557209.1
CDS TCA 72 bp TCTAACAGTCATTACCTGGAGACCTTGATCTATCAGTaGTGGAGATGGACAGCCTCCTGTTCTAGGCTGGAT +
Preference number: 6 (lower is better)
Translates to: SNSHYLETLIYQ*WRWTASCSRLD
Trigger: ATCCAGCCTAGAACAGGAGGCTGTCCATCTCCATCACTGATAGATCAAGGTCTCCAGGTAATGACTGTTAGA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555230.5
ENST00000557068.5
CDS CAA 72 bp TTTAGTGGCATTCCAGGTTCAATAAGGACACGTCTTTaGACTTTTTCTTTGGTAGGTGGTCTGGCGGGCCCT +
Preference number: 6 (lower is better)
Translates to: FSGIPGSIRTRL*TFSLVGGLAGP
Trigger: AGGGCCCGCCAGACCACCTACCAAAGAAAAAGTCAAAAGACGTGTCCTTATTGAACCTGGAATGCCACTAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000338904.7
ENST00000404716.7
ENST00000429244.6
ENST00000553541.5
ENST00000553706.5
ENST00000554964.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
ENST00000611135.1
CDS GCA 72 bp TGGGTGTGTGGTGATGAGAGTTCTCATCATTTTTCCTaGAGACACTGTGGAATGCAGGCTTCTTGGTTTTTC +
Preference number: 6 (lower is better)
Translates to: WVCGDESSHHFS*RHCGMQASWFF
Trigger: GAAAAACCAAGAAGCCTGCATTCCACAGTGTCTGCAGGAAAAATGATGAGAACTCTCATCACCACACACCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000553541.5
ENST00000554964.5
CDS CCA 72 bp GACACCATCCTCACTGAGGAAACTTCTGTGTTCAGGTaGCTCCACGAGATCATTTATAGTATGAGGAATACG +
Preference number: 6 (lower is better)
Translates to: DTILTEETSVFR*LHEIIYSMRNT
Trigger: CGTATTCCTCATACTATAAATGATCTCGTGGAGCCACCTGAACACAGAAGTTTCCTCAGTGAGGATGGTGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000338904.7
ENST00000404716.7
ENST00000429244.6
ENST00000553541.5
ENST00000553706.5
ENST00000554964.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
ENST00000611135.1
CDS TCA 72 bp CGTTGTAAAAGAAGTCCTACTTGGTGGCAACCTGAGTaGTTCTCTAACAGTCATTACCTGGAGACCTTGATC +
Preference number: 6 (lower is better)
Translates to: RCKRSPTWWQPE*FSNSHYLETLI
Trigger: GATCAAGGTCTCCAGGTAATGACTGTTAGAGAATCACTCAGGTTGCCACCAAGTAGGACTTCTTTTACAACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555230.5
ENST00000557068.5
CDS CAA 72 bp TTCCATTTCCTGTGTGGGGCACAGTTATGCCACATGTaGCTGTTCTGGGCTCTAAGATTTTGGACCATTTTT +
Preference number: 6 (lower is better)
Translates to: FHFLCGAQLCHM*LFWALRFWTIF
Trigger: AAAAATGGTCCAAAATCTTAGAGCCCAGAACAGCAACATGTGGCATAACTGTGCCCCACACAGGAAATGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000555230.5
ENST00000557068.5
CDS GCA 72 bp TGGGTGTGTGGTGATGAGAGTTCTCATCATTTTTCCTaGAGACACTTAAATGCAAGAGGCACTATGTTGACT +
Preference number: 6 (lower is better)
Translates to: WVCGDESSHHFS*RHLNARGTMLT
Trigger: AGTCAACATAGTGCCTCTTGCATTTAAGTGTCTGCAGGAAAAATGATGAGAACTCTCATCACCACACACCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000338904.7
CDS CAA 90 bp GACACTAAAAGAGATAACGGGATATGTTCTATTGTGATAATGTGCTaGCTTCCATTTCCTGTGTGGGGCACAGTTATGCCACATGTTGCT +
Preference number: 6 (lower is better)
Translates to: DTKRDNGICSIVIMC*LPFPVWGTVMPHVA
Trigger: AGCAACATGTGGCATAACTGTGCCCCACACAGGAAATGGAAGCAAGCACATTATCACAATAGAACATATCCCGTTATCTCTTTTAGTGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000555230.5
ENST00000557068.5
CDS CAA 90 bp TGTGTAGAAAGGTTAGAGAATGATGGAATTAAAGAAAGGTGGGTGTaGGGGAACACATCAGAAAGTAGAGACAGGAAAGTTGAGCATAGG +
Preference number: 6 (lower is better)
Translates to: CVERLENDGIKERWV*GNTSESRDRKVEHR
Trigger: CCTATGCTCAACTTTCCTGTCTCTACTTTCTGATGTGTTCCCCAACACCCACCTTTCTTTAATTCCATCATTCTCTAACCTTTCTACACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555230.5
ENST00000557068.5
CDS CAA 90 bp CCTAATTCCATTCTTACATGGCACAAATCTGTTGTAACAGATTTTTaGGAGCTCGTCATATTGCATAAGAAGGAAGTAATGTTCTGCCAC +
Preference number: 6 (lower is better)
Translates to: PNSILTWHKSVVTDF*ELVILHKKEVMFCH
Trigger: GTGGCAGAACATTACTTCCTTCTTATGCAATATGACGAGCTCCAAAAAATCTGTTACAACAGATTTGTGCCATGTAAGAATGGAATTAGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000338904.7
ENST00000404716.7
ENST00000429244.6
ENST00000553541.5
ENST00000553706.5
ENST00000554964.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
ENST00000611135.1
CDS CAA 72 bp ATTCTTACATGGCACAAATCTGTTGTAACAGATTTTTaGGAGCTCGTCATATTGCATAAGAAGGAAGTAATG +
Preference number: 6 (lower is better)
Translates to: ILTWHKSVVTDF*ELVILHKKEVM
Trigger: CATTACTTCCTTCTTATGCAATATGACGAGCTCCAAAAAATCTGTTACAACAGATTTGTGCCATGTAAGAAT
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000338904.7
ENST00000404716.7
ENST00000429244.6
ENST00000553541.5
ENST00000553706.5
ENST00000554964.5
ENST00000555230.5
ENST00000556208.5
ENST00000557068.5
ENST00000557209.1
ENST00000611135.1