Pregenerated sensors for RNASE8 (Homo sapiens)

Ensembl gene IDs: ENSG00000173431

Ensembl transcript IDs: ENST00000308227.2

Found 12 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS-3UTR GCA 90 bp	TTGCAGTGGGGAGCAAGGATTAATAACGAACTGGAGGGAGGAAAAGCAGCAGCACAGGGGGCAGCATCCTaGTCTGGCCGGTGCCATCTC	+
Preference number: 4 (lower is better) Translates to: LQWGARINNELEGGKAAAQGAAS*SGRCHL Trigger: GAGATGGCACCGGCCAGAGCAGGATGCTGCCCCCTG...TGCTGCTGCTTTTCCTCCCTCCAGTTCGTTATTAATCCTTGCTCCCCACTGCAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000308227.2
CDS-3UTR CCA 90 bp	GGGAGGAAAAGCAGCAGCATACAGTCTGCAGAGTGTGAGGTGGAACGTGGGCACAACAAGTGGGTACCCTaGGTCACCCTGTTGTGGAGG	+
Preference number: 4 (lower is better) Translates to: GRKSSSIQSAECEVERGHNKWVP*VTLLWR Trigger: CCTCCACAACAGGGTGACCCAGGGTACCCACTTGTT...GTGCCCACGTTCCACCTCACACTCTGCAGACTGTATGCTGCTGCTTTTCCTCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000308227.2
CDS-3UTR CCA 90 bp	CATTTGCAGTGGGGAGCAAGGATTAATAACGAACTGGAGGGAGGAAAAGCAGCACTGCAGAGTGTGAGGTaGAACGTGGGCACCAGGGCT	+
Preference number: 4 (lower is better) Translates to: HLQWGARINNELEGGKAALQSVR*NVGTRA Trigger: AGCCCTGGTGCCCACGTTCCACCTCACACTCTGCAG...TGCTGCTTTTCCTCCCTCCAGTTCGTTATTAATCCTTGCTCCCCACTGCAAATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000308227.2
CDS-3UTR TCA 90 bp	TGCAGTGGGGAGCAAGGATTAATAACGAACTGGAGGGAGGAAAAGCAGCAGCATGTTTGGGTACTTCCCTaGGGTGAGCTCACCCATGGT	+
Preference number: 4 (lower is better) Translates to: CSGEQGLITNWREEKQQHVWVLP*GELTHG Trigger: ACCATGGGTGAGCTCACCTCAGGGAAGTACCCAAAC...ATGCTGCTGCTTTTCCTCCCTCCAGTTCGTTATTAATCCTTGCTCCCCACTGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000308227.2
CDS-3UTR CCA 90 bp	TTGCAGTGGGGAGCAAGGATTAATAACGAACTGGAGGGAGGAAAAGCAGCAGCATGGGTCACCCTGTTGTaGAGGGTCACAGGCCACTAT	+
Preference number: 4 (lower is better) Translates to: LQWGARINNELEGGKAAAWVTLL*RVTGHY Trigger: ATAGTGGCCTGTGACCCTCCACAACAGGGTGACCCA...TGCTGCTGCTTTTCCTCCCTCCAGTTCGTTATTAATCCTTGCTCCCCACTGCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000308227.2
CDS-3UTR TCA 90 bp	AGTGGGGAGCAAGGATTAATAACGAACTGGAGGGAGGAAAAGCAGCAGCATACAGAGGAGGTAGGTGGATaGATAGGTCATCATGGGGGA	+
Preference number: 4 (lower is better) Translates to: SGEQGLITNWREEKQQHTEEVGG*IGHHGG Trigger: TCCCCCATGATGACCTATTCATCCACCTACCTCCTC...TGTATGCTGCTGCTTTTCCTCCCTCCAGTTCGTTATTAATCCTTGCTCCCCACT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000308227.2
CDS-3UTR GCA 90 bp	AGGAAAAGCAGCAGCATACAGTCTGCAGAGTGTGAGGTGGAACGTGGGCACCAGTTTTACAGCTATTCTTaGAGGCTATGTTGGGGGTCT	+
Preference number: 4 (lower is better) Translates to: RKSSSIQSAECEVERGHQFYSYS*RLCWGS Trigger: AGACCCCCAACATAGCCTGCAAGAATAGCTGTAAAA...CTGGTGCCCACGTTCCACCTCACACTCTGCAGACTGTATGCTGCTGCTTTTCCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000308227.2
CDS-3UTR GCA 90 bp	ATTTGCAGTGGGGAGCAAGGATTAATAACGAACTGGAGGGAGGAAAAGCAGCAGACAACTTTATCCAAGTaGACAGGAACAAGTGGGTAC	+
Preference number: 4 (lower is better) Translates to: ICSGEQGLITNWREEKQQTTLSK*TGTSGY Trigger: GTACCCACTTGTTCCTGTGCACTTGGATAAAGTTGT...CTGCTGCTTTTCCTCCCTCCAGTTCGTTATTAATCCTTGCTCCCCACTGCAAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000308227.2
CDS-3UTR CAA 90 bp	AGGAAAAGCAGCAGCATACAGTCTGCAGAGTGTGAGGTGGAACGTGGGCACCAGCCCTGGGTCACCCTGTaGTGGAGGGTCACAGGCCAC	+
Preference number: 5 (lower is better) Translates to: RKSSSIQSAECEVERGHQPWVTL*WRVTGH Trigger: GTGGCCTGTGACCCTCCACAACAGGGTGACCCAGGG...CTGGTGCCCACGTTCCACCTCACACTCTGCAGACTGTATGCTGCTGCTTTTCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000308227.2
CDS-3UTR CAA 90 bp	GGAGGAAAAGCAGCAGCATACAGTCTGCAGAGTGTGAGGTGGAACGTGGGCACCGATGATGTCATGTCCTaGGGCTTGGCTCTGACTAGG	+
Preference number: 5 (lower is better) Translates to: GGKAAAYSLQSVRWNVGTDDVMS*GLALTR Trigger: CCTAGTCAGAGCCAAGCCCAAGGACATGACATCATC...GGTGCCCACGTTCCACCTCACACTCTGCAGACTGTATGCTGCTGCTTTTCCTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000308227.2
CDS-3UTR CAA 90 bp	ATTTGCAGTGGGGAGCAAGGATTAATAACGAACTGGAGGGAGGAAAAGCAGCAGTTCAGGTGCTTCTCTTaGTACCTGCAGTTTGGGTAC	+
Preference number: 5 (lower is better) Translates to: ICSGEQGLITNWREEKQQFRCFS*YLQFGY Trigger: GTACCCAAACTGCAGGTACAAAGAGAAGCACCTGAA...CTGCTGCTTTTCCTCCCTCCAGTTCGTTATTAATCCTTGCTCCCCACTGCAAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000308227.2
CDS-3UTR CAA 90 bp	AGTGGGGAGCAAGGATTAATAACGAACTGGAGGGAGGAAAAGCAGCAGCATACACGTTCTGTGTACTTATaGATGATGCTCATGGCTGAG	+
Preference number: 5 (lower is better) Translates to: SGEQGLITNWREEKQQHTRSVYL*MMLMAE Trigger: CTCAGCCATGAGCATCATCAATAAGTACACAGAACG...TGTATGCTGCTGCTTTTCCTCCCTCCAGTTCGTTATTAATCCTTGCTCCCCACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000308227.2