Pregenerated sensors for RNASE7 (Homo sapiens)
Ensembl gene IDs: ENSG00000165799Ensembl transcript IDs: ENST00000298690.5, ENST00000481538.1
Found 65 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TCTCCTTGTCATGCTGCCCTAATGCCAGGGGGCAGGGGAGACATGTaGAATGGCATAGACCAGGGAACCCACAGACCTGAGCTTGCTGTT | + |
|
Preference number: 1 (lower is better) Translates to: SPCHAALMPGGRGDM*NGIDQGTHRPELAV Trigger: AACAGCAAGCTCAGGTCTGTGGGTTCCCTGGTCTATGCCATTGCACATGTCTCCCCTGCCCCCTGGCATTAGGGCAGCATGACAAGGAGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000298690.5 |
||
| 3UTR CCA 90 bp | TTATATTTTTCTTTCCTTCAGGTCACCTCACTGCCACGTCAGAGCTaGGGAAGACTTCTAGTTCAGGAACAGAAACAGCTGTGTCCACAA | + |
|
Preference number: 1 (lower is better) Translates to: LYFSFLQVTSLPRQS*GRLLVQEQKQLCPQ Trigger: TTGTGGACACAGCTGTTTCTGTTCCTGAACTAGAAGTCTTCCCCAGCTCTGACGTGGCAGTGAGGTGACCTGAAGGAAAGAAAAATATAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000298690.5 |
||
| 3UTR-3UTR CCA 90 bp | AACAGAAACAGCTGTGTCCACAAATCCCATATGCCCCCTTTCCATTTATTTCCTCTGGGTGTAGGGGAGTaGTGCGGAGTCCTGGAGAGG | + |
|
Preference number: 2 (lower is better) Translates to: NRNSCVHKSHMPPFHLFPLGVGE*CGVLER Trigger: CCTCTCCAGGACTCCGCACCACTCCCCTACACCCAG...AGGAAATAAATGGAAAGGGGGCATATGGGATTTGTGGACACAGCTGTTTCTGTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000298690.5 |
||
| 3UTR-3UTR GCA 90 bp | AATGACCTTTATTGCAGCCAACACAGGGTAACTGGCTCTTCAGAGCACTCGTTTATGAGGGGAAGAGAATaGTCTGGGTGTAGGGGAGTG | + |
|
Preference number: 2 (lower is better) Translates to: NDLYCSQHRVTGSSEHSFMRGRE*SGCRGV Trigger: CACTCCCCTACACCCAGAGCATTCTCTTCCCCTCAT...AAACGAGTGCTCTGAAGAGCCAGTTACCCTGTGTTGGCTGCAATAAAGGTCATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000298690.5 ENST00000481538.1 |
||
| 3UTR-3UTR TCA 90 bp | ACTCGTTTCTTCATGAGTGAACTCTTACCTAGTTCACCGCTTGCCTCTGTAACAAACAGCCCCAAGAGATaGGGGGAAGAGAATGCTCTG | + |
|
Preference number: 2 (lower is better) Translates to: TRFFMSELLPSSPLASVTNSPKR*GEENAL Trigger: CAGAGCATTCTCTTCCCCTCATCTCTTGGGGCTGTT...TGTTACAGAGGCAAGCGGTGAACTAGGTAAGAGTTCACTCATGAAGAAACGAGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000298690.5 ENST00000481538.1 |
||
| 3UTR-3UTR GCA 90 bp | AAAACCTTAATTTCCTCATCCATAAAGAAGGCATACAATCCCTGTCAAGTCTATGGCAGGGGAGACATGTaGAATGGCATAGACCAGGGA | + |
|
Preference number: 2 (lower is better) Translates to: KTLISSSIKKAYNPCQVYGRGDM*NGIDQG Trigger: TCCCTGGTCTATGCCATTGCACATGTCTCCCCTGCC...ATAGACTTGACAGGGATTGTATGCCTTCTTTATGGATGAGGAAATTAAGGTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000298690.5 |
||
| 3UTR-3UTR CCA 90 bp | AACCTTAATTTCCTCATCCATAAAGAAGGCATACAATCCCTGTCAAGTCTATGTGGGAGACATGTGCAATaGCATAGACCAGGGAACCCA | + |
|
Preference number: 2 (lower is better) Translates to: NLNFLIHKEGIQSLSSLCGRHVQ*HRPGNP Trigger: TGGGTTCCCTGGTCTATGCCATTGCACATGTCTCCC...ACATAGACTTGACAGGGATTGTATGCCTTCTTTATGGATGAGGAAATTAAGGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000298690.5 |
||
| 3UTR GCA 72 bp | CATGCTGCCCTAATGCCAGGGGGCAGGGGAGACATGTaGAATGGCATAGACCAGGGAACCCACAGACCTGAG | + |
|
Preference number: 3 (lower is better) Translates to: HAALMPGGRGDM*NGIDQGTHRPE Trigger: CTCAGGTCTGTGGGTTCCCTGGTCTATGCCATTGCACATGTCTCCCCTGCCCCCTGGCATTAGGGCAGCATG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000298690.5 |
||
| 3UTR-3UTR CAA 90 bp | TCAGGAACAGAAACAGCTGTGTCCACAAATCCCATATGCCCCCTTTCCATTTATCCCACAGACCTGAGCTaGCTGTTTCTTGGGGATAAG | + |
|
Preference number: 3 (lower is better) Translates to: SGTETAVSTNPICPLSIYPTDLS*LFLGDK Trigger: CTTATCCCCAAGAAACAGCAAGCTCAGGTCTGTGGG...ATAAATGGAAAGGGGGCATATGGGATTTGTGGACACAGCTGTTTCTGTTCCTGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000298690.5 |
||
| CDS-3UTR GCA 90 bp | TGCCCTAATGCCAGGGGGCAGGGGAGACATGTGCAATGGCATAGACCAGGGAACGGGCAGGGGTCGCTTTaGGCTTGGTCTTCGTGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: CPNARGQGRHVQWHRPGNGQGSL*AWSSCC Trigger: ACAGCACGAAGACCAAGCGCAAAGCGACCCCTGCCC...GTTCCCTGGTCTATGCCATTGCACATGTCTCCCCTGCCCCCTGGCATTAGGGCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000298690.5 |
||
| CDS-3UTR CCA 90 bp | ATGAGGGGAAGAGAATGCTCTGGGTGTAGGGGAGTGGTGCGGAGTCCTGGAGAGCTCAGTGGGCTGAGGTaGTGTCCACGCACTCCTAGG | + |
|
Preference number: 4 (lower is better) Translates to: MRGRECSGCRGVVRSPGELSGLR*CPRTPR Trigger: CCTAGGAGTGCGTGGACACCACCTCAGCCCACTGAG...CTCTCCAGGACTCCGCACCACTCCCCTACACCCAGAGCATTCTCTTCCCCTCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000298690.5 ENST00000481538.1 |
||
| CDS-3UTR CCA 90 bp | ATGAGGGGAAGAGAATGCTCTGGGTGTAGGGGAGTGGTGCGGAGTCCTGGAGAGGTGACTCCTGCTCAGTaGGCTGAGGTGGTGTCCACG | + |
|
Preference number: 4 (lower is better) Translates to: MRGRECSGCRGVVRSPGEVTPAQ*AEVVST Trigger: CGTGGACACCACCTCAGCCCACTGAGCAGGAGTCAC...CTCTCCAGGACTCCGCACCACTCCCCTACACCCAGAGCATTCTCTTCCCCTCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000298690.5 ENST00000481538.1 |
||
| CDS-3UTR CCA 90 bp | GAGATGAGGGGAAGAGAATGCTCTGGGTGTAGGGGAGTGGTGCGGAGTCCTGGAGTGACTCCTGCTCAGTaGGCTGAGGTGGTGTCCACG | + |
|
Preference number: 4 (lower is better) Translates to: EMRGRECSGCRGVVRSPGVTPAQ*AEVVST Trigger: CGTGGACACCACCTCAGCCCACTGAGCAGGAGTCAC...TCCAGGACTCCGCACCACTCCCCTACACCCAGAGCATTCTCTTCCCCTCATCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000298690.5 ENST00000481538.1 |
||
| CDS-3UTR TCA 90 bp | CTGAACCAGGAACAGCCCCAAGAGATGAGGGGAAGAGAATGCTCTGGGTGTAGGTCCTGCTCAGTGGGCTaGGGTGGTGTCCACGCACTC | + |
|
Preference number: 4 (lower is better) Translates to: LNQEQPQEMRGRECSGCRSCSVG*GGVHAL Trigger: GAGTGCGTGGACACCACCTCAGCCCACTGAGCAGGA...CCTACACCCAGAGCATTCTCTTCCCCTCATCTCTTGGGGCTGTTCCTGGTTCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000298690.5 ENST00000481538.1 |
||
| CDS-3UTR GCA 90 bp | CTGAACCAGGAACAGCCCCAAGAGATGAGGGGAAGAGAATGCTCTGGGTGTAGGACTGACTGGGATCTCTaGCACCCACAGCCCCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LNQEQPQEMRGRECSGCRTDWDL*HPQPQQ Trigger: CTGCTGGGGCTGTGGGTGGCAGAGATCCCAGTCAGT...CCTACACCCAGAGCATTCTCTTCCCCTCATCTCTTGGGGCTGTTCCTGGTTCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000298690.5 ENST00000481538.1 |
||
| CDS-3UTR CCA 90 bp | CGGAGTCCTGGAGAGGGAATTGAAGGTCAGCCAAAGAGCAAGCCAGTCTGGAAACTGGGTGTAGGGGAGTaGTGCGGAGTCCTGGAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: RSPGEGIEGQPKSKPVWKLGVGE*CGVLER Trigger: CCTCTCCAGGACTCCGCACCACTCCCCTACACCCAG...TTTCCAGACTGGCTTGCTCTTTGGCTGACCTTCAATTCCCTCTCCAGGACTCCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000298690.5 ENST00000481538.1 |
||
| CDS-3UTR TCA 90 bp | GTGCGGAGTCCTGGAGAGGGAATTGAAGGTCAGCCAAAGAGCAAGCCAGTCTGGAGGCTGTCAGATCTCTaGGGGCCTCTTCTCACTCCT | + |
|
Preference number: 4 (lower is better) Translates to: VRSPGEGIEGQPKSKPVWRLSDL*GPLLTP Trigger: AGGAGTGAGAAGAGGCCCTCAGAGATCTGACAGCCT...CCAGACTGGCTTGCTCTTTGGCTGACCTTCAATTCCCTCTCCAGGACTCCGCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000481538.1 |
||
| CDS-3UTR GCA 90 bp | CGGAGTCCTGGAGAGGGAATTGAAGGTCAGCCAAAGAGCAAGCCAGTCTGGAAAAAGGGGGCAGAATCCTaGTCTGGCCGGTGCCATCTC | + |
|
Preference number: 4 (lower is better) Translates to: RSPGEGIEGQPKSKPVWKKGAES*SGRCHL Trigger: GAGATGGCACCGGCCAGAGCAGGATTCTGCCCCCTT...TTTCCAGACTGGCTTGCTCTTTGGCTGACCTTCAATTCCCTCTCCAGGACTCCG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000298690.5 ENST00000481538.1 |
||
| CDS-3UTR GCA 90 bp | CCTTGTCATGCTGCCCTAATGCCAGGGGGCAGGGGAGACATGTGCAATGGCATATTCAGGTCACCTCACTaGCACGTCAGAGCTGGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: PCHAALMPGGRGDMCNGIFRSPH*HVRAGE Trigger: TTCCCCAGCTCTGACGTGGCAGTGAGGTGACCTGAA...TATGCCATTGCACATGTCTCCCCTGCCCCCTGGCATTAGGGCAGCATGACAAGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000298690.5 |
||
| CDS-3UTR CCA 90 bp | GCTGCCCTAATGCCAGGGGGCAGGGGAGACATGTGCAATGGCATAGACCAGGGACCAACACAGGGTAACTaGCTCTTCAGAGCACTCGTT | + |
|
Preference number: 4 (lower is better) Translates to: AALMPGGRGDMCNGIDQGPTQGN*LFRALV Trigger: AACGAGTGCTCTGAAGAGCCAGTTACCCTGTGTTGG...TCCCTGGTCTATGCCATTGCACATGTCTCCCCTGCCCCCTGGCATTAGGGCAGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000298690.5 |
||
| CDS-3UTR TCA 90 bp | GAGATGAGGGGAAGAGAATGCTCTGGGTGTAGGGGAGTGGTGCGGAGTCCTGGAACCAGGTGGAATTGCTaGGAGTCCTTTTTCTGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: EMRGRECSGCRGVVRSPGTRWNC*ESFFWG Trigger: TCCCCAGAAAAAGGACTCTCAGCAATTCCACCTGGT...TCCAGGACTCCGCACCACTCCCCTACACCCAGAGCATTCTCTTCCCCTCATCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENST00000298690.5 ENST00000481538.1 |
||
| CDS-3UTR TCA 90 bp | GTGCGGAGTCCTGGAGAGGGAATTGAAGGTCAGCCAAAGAGCAAGCCAGTCTGGACCAGGTGGAATTGCTaGGAGTCCTTTTTCTGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: VRSPGEGIEGQPKSKPVWTRWNC*ESFFWG Trigger: TCCCCAGAAAAAGGACTCTCAGCAATTCCACCTGGT...CCAGACTGGCTTGCTCTTTGGCTGACCTTCAATTCCCTCTCCAGGACTCCGCAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000298690.5 ENST00000481538.1 |
||
| CDS-3UTR GCA 90 bp | CGGAGTCCTGGAGAGGGAATTGAAGGTCAGCCAAAGAGCAAGCCAGTCTGGAAATGCGCTTGGTCTTCGTaGTGTGACTCCTGCTCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: RSPGEGIEGQPKSKPVWKCAWSS*CDSCSV Trigger: CACTGAGCAGGAGTCACAGCACGAAGACCAAGCGCA...TTTCCAGACTGGCTTGCTCTTTGGCTGACCTTCAATTCCCTCTCCAGGACTCCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000298690.5 ENST00000481538.1 |
||
| CDS-3UTR CCA 90 bp | GAACCCACAGACCTGAGCTTGCTGTTTCTTGGGGATAAGCATCTGGGAAAACAGCTCAGTGGGCTGAGGTaGTGTCCACGCACTCCTAGG | + |
|
Preference number: 4 (lower is better) Translates to: EPTDLSLLFLGDKHLGKQLSGLR*CPRTPR Trigger: CCTAGGAGTGCGTGGACACCACCTCAGCCCACTGAG...CTGTTTTCCCAGATGCTTATCCCCAAGAAACAGCAAGCTCAGGTCTGTGGGTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000298690.5 |
||
| CDS-3UTR CCA 90 bp | GAACTCTTACCTAGTTCACCGCTTGCCTCTGTAACAGTGACTTCTTTCTTGCGCCTGGGTGTAGGGGAGTaGTGCGGAGTCCTGGAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: ELLPSSPLASVTVTSFLRLGVGE*CGVLER Trigger: CCTCTCCAGGACTCCGCACCACTCCCCTACACCCAG...GCGCAAGAAAGAAGTCACTGTTACAGAGGCAAGCGGTGAACTAGGTAAGAGTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000298690.5 ENST00000481538.1 |
||
| CDS-3UTR CCA 90 bp | GTGCGGAGTCCTGGAGAGGGAATTGAAGGTCAGCCAAAGAGCAAGCCAGTCTGGCCAACACAGGGTAACTaGCTCTTCAGAGCACTCGTT | + |
|
Preference number: 4 (lower is better) Translates to: VRSPGEGIEGQPKSKPVWPTQGN*LFRALV Trigger: AACGAGTGCTCTGAAGAGCCAGTTACCCTGTGTTGG...CCAGACTGGCTTGCTCTTTGGCTGACCTTCAATTCCCTCTCCAGGACTCCGCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000298690.5 ENST00000481538.1 |
||
| CDS-3UTR TCA 90 bp | CGTTTCTTCATGAGTGAACTCTTACCTAGTTCACCGCTTGCCTCTGTAACAGTGTCCTGCTCAGTGGGCTaGGGTGGTGTCCACGCACTC | + |
|
Preference number: 4 (lower is better) Translates to: RFFMSELLPSSPLASVTVSCSVG*GGVHAL Trigger: GAGTGCGTGGACACCACCTCAGCCCACTGAGCAGGA...CACTGTTACAGAGGCAAGCGGTGAACTAGGTAAGAGTTCACTCATGAAGAAACG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000298690.5 ENST00000481538.1 |
||
| CDS-3UTR GCA 90 bp | GAACTCTTACCTAGTTCACCGCTTGCCTCTGTAACAGTGACTTCTTTCTTGCGCGGGCAGGGGTCGCTTTaGGCTTGGTCTTCGTGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: ELLPSSPLASVTVTSFLRGQGSL*AWSSCC Trigger: ACAGCACGAAGACCAAGCGCAAAGCGACCCCTGCCC...GCGCAAGAAAGAAGTCACTGTTACAGAGGCAAGCGGTGAACTAGGTAAGAGTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000298690.5 ENST00000481538.1 |
||
| CDS-3UTR GCA 90 bp | GACCTTTATTGCAGCCAACACAGGGTAACTGGCTCTTCAGAGCACTCGTTTCTTACTGACTGGGATCTCTaGCACCCACAGCCCCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: DLYCSQHRVTGSSEHSFLTDWDL*HPQPQQ Trigger: CTGCTGGGGCTGTGGGTGGCAGAGATCCCAGTCAGT...AAGAAACGAGTGCTCTGAAGAGCCAGTTACCCTGTGTTGGCTGCAATAAAGGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000298690.5 ENST00000481538.1 |
||
| CDS-3UTR CCA 90 bp | CGTTTCTTCATGAGTGAACTCTTACCTAGTTCACCGCTTGCCTCTGTAACAGTGGAGGAGCAGTCAGGATaGAGGGCAGGGGTCGCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: RFFMSELLPSSPLASVTVEEQSG*RAGVAL Trigger: CAAAGCGACCCCTGCCCTCCATCCTGACTGCTCCTC...CACTGTTACAGAGGCAAGCGGTGAACTAGGTAAGAGTTCACTCATGAAGAAACG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000298690.5 ENST00000481538.1 |
||
| CDS-3UTR CCA 90 bp | AGGGGAGTGGTGCGGAGTCCTGGAGAGGGAATTGAAGGTCAGCCAAAGAGCAAGAAGAGCAAGCCAGTCTaGAAACCTAAAGGACTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: RGVVRSPGEGIEGQPKSKKSKPV*KPKGLC Trigger: ACAGAGTCCTTTAGGTTTCCAGACTGGCTTGCTCTT...CTTGCTCTTTGGCTGACCTTCAATTCCCTCTCCAGGACTCCGCACCACTCCCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000298690.5 ENST00000481538.1 |
||
| CDS-3UTR TCA 90 bp | CCTTGTCATGCTGCCCTAATGCCAGGGGGCAGGGGAGACATGTGCAATGGCATAGCACTCGTTTCTTCATaGGTGAACTCTTACCTAGTT | + |
|
Preference number: 4 (lower is better) Translates to: PCHAALMPGGRGDMCNGIALVSS*VNSYLV Trigger: AACTAGGTAAGAGTTCACTCATGAAGAAACGAGTGC...TATGCCATTGCACATGTCTCCCCTGCCCCCTGGCATTAGGGCAGCATGACAAGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000298690.5 |
||
| CDS-3UTR GCA 90 bp | ACCGCTTGCCTCTGTAACAGTGACTTCTTTCTTGCGCAACAGAGTGTCAGCTTCATGAGGGGAAGAGAATaGTCTGGGTGTAGGGGAGTG | + |
|
Preference number: 4 (lower is better) Translates to: TACLCNSDFFLAQQSVSFMRGRE*SGCRGV Trigger: CACTCCCCTACACCCAGAGCATTCTCTTCCCCTCAT...GAAGCTGACACTCTGTTGCGCAAGAAAGAAGTCACTGTTACAGAGGCAAGCGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000481538.1 |
||
| CDS-3UTR GCA 90 bp | AGGGGAGTGGTGCGGAGTCCTGGAGAGGGAATTGAAGGTCAGCCAAAGAGCAAGGGTAATGACCTTTATTaGAGCCAACACAGGGTAACT | + |
|
Preference number: 4 (lower is better) Translates to: RGVVRSPGEGIEGQPKSKGNDLY*SQHRVT Trigger: AGTTACCCTGTGTTGGCTGCAATAAAGGTCATTACC...CTTGCTCTTTGGCTGACCTTCAATTCCCTCTCCAGGACTCCGCACCACTCCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000298690.5 ENST00000481538.1 |
||
| CDS-3UTR CCA 90 bp | ACTCGTTTCTTCATGAGTGAACTCTTACCTAGTTCACCGCTTGCCTCTGTAACAGCTATTTTGGGGGTCTaGCAGGTGGCGGCCACACTG | + |
|
Preference number: 4 (lower is better) Translates to: TRFFMSELLPSSPLASVTAILGV*QVAATL Trigger: CAGTGTGGCCGCCACCTGCCAGACCCCCAAAATAGC...TGTTACAGAGGCAAGCGGTGAACTAGGTAAGAGTTCACTCATGAAGAAACGAGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000298690.5 ENST00000481538.1 |
||
| CDS-3UTR GCA 90 bp | GAACTCTTACCTAGTTCACCGCTTGCCTCTGTAACAGTGACTTCTTTCTTGCGCATGAGGGGAAGAGAATaGTCTGGGTGTAGGGGAGTG | + |
|
Preference number: 4 (lower is better) Translates to: ELLPSSPLASVTVTSFLRMRGRE*SGCRGV Trigger: CACTCCCCTACACCCAGAGCATTCTCTTCCCCTCAT...GCGCAAGAAAGAAGTCACTGTTACAGAGGCAAGCGGTGAACTAGGTAAGAGTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000298690.5 ENST00000481538.1 |
||
| CDS-3UTR GCA 90 bp | TCAGGAACAGAAACAGCTGTGTCCACAAATCCCATATGCCCCCTTTCCATTTATCTCTCCTTGTCATGCTaGCCTAATGCCAGGGGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: SGTETAVSTNPICPLSIYLSLSC*PNARGQ Trigger: CTGCCCCCTGGCATTAGGGCAGCATGACAAGGAGAG...ATAAATGGAAAGGGGGCATATGGGATTTGTGGACACAGCTGTTTCTGTTCCTGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000298690.5 |
||
| CDS-3UTR CCA 90 bp | ACTCGTTTCTTCATGAGTGAACTCTTACCTAGTTCACCGCTTGCCTCTGTAACAGGGTCGCTTTGCGCTTaGTCTTCGTGCTGTGACTCC | + |
|
Preference number: 4 (lower is better) Translates to: TRFFMSELLPSSPLASVTGSLCA*SSCCDS Trigger: GGAGTCACAGCACGAAGACCAAGCGCAAAGCGACCC...TGTTACAGAGGCAAGCGGTGAACTAGGTAAGAGTTCACTCATGAAGAAACGAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000298690.5 ENST00000481538.1 |
||
| CDS-3UTR GCA 90 bp | TTCATGAGTGAACTCTTACCTAGTTCACCGCTTGCCTCTGTAACAGTGACTTCTTGCGCTTGGTCTTCGTaGTGTGACTCCTGCTCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: FMSELLPSSPLASVTVTSCAWSS*CDSCSV Trigger: CACTGAGCAGGAGTCACAGCACGAAGACCAAGCGCA...AGAAGTCACTGTTACAGAGGCAAGCGGTGAACTAGGTAAGAGTTCACTCATGAA 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000298690.5 ENST00000481538.1 |
||
| CDS-3UTR CCA 90 bp | ACCGCTTGCCTCTGTAACAGTGACTTCTTTCTTGCGCAACAGAGTGTCAGCTTCAAGAGCAAGCCAGTCTaGAAACCTAAAGGACTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: TACLCNSDFFLAQQSVSFKSKPV*KPKGLC Trigger: ACAGAGTCCTTTAGGTTTCCAGACTGGCTTGCTCTT...GAAGCTGACACTCTGTTGCGCAAGAAAGAAGTCACTGTTACAGAGGCAAGCGGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000481538.1 |
||
| CDS-3UTR CCA 90 bp | ACTCGTTTCTTCATGAGTGAACTCTTACCTAGTTCACCGCTTGCCTCTGTAACAGGGAGACATGTGCAATaGCATAGACCAGGGAACCCA | + |
|
Preference number: 4 (lower is better) Translates to: TRFFMSELLPSSPLASVTGRHVQ*HRPGNP Trigger: TGGGTTCCCTGGTCTATGCCATTGCACATGTCTCCC...TGTTACAGAGGCAAGCGGTGAACTAGGTAAGAGTTCACTCATGAAGAAACGAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000298690.5 |
||
| CDS-3UTR CCA 90 bp | AAAACCTTAATTTCCTCATCCATAAAGAAGGCATACAATCCCTGTCAAGTCTATGAGGAGCAGTCAGGATaGAGGGCAGGGGTCGCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: KTLISSSIKKAYNPCQVYEEQSG*RAGVAL Trigger: CAAAGCGACCCCTGCCCTCCATCCTGACTGCTCCTC...ATAGACTTGACAGGGATTGTATGCCTTCTTTATGGATGAGGAAATTAAGGTTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000298690.5 |
||
| CDS-3UTR TCA 90 bp | AATGACCTTTATTGCAGCCAACACAGGGTAACTGGCTCTTCAGAGCACTCGTTTGCACTCGTTTCTTCATaGGTGAACTCTTACCTAGTT | + |
|
Preference number: 4 (lower is better) Translates to: NDLYCSQHRVTGSSEHSFALVSS*VNSYLV Trigger: AACTAGGTAAGAGTTCACTCATGAAGAAACGAGTGC...AAACGAGTGCTCTGAAGAGCCAGTTACCCTGTGTTGGCTGCAATAAAGGTCATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000298690.5 ENST00000481538.1 |
||
| CDS-3UTR TCA 90 bp | AACCTTAATTTCCTCATCCATAAAGAAGGCATACAATCCCTGTCAAGTCTATGTAACAGCCCCAAGAGATaGGGGGAAGAGAATGCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: NLNFLIHKEGIQSLSSLCNSPKR*GEENAL Trigger: CAGAGCATTCTCTTCCCCTCATCTCTTGGGGCTGTT...ACATAGACTTGACAGGGATTGTATGCCTTCTTTATGGATGAGGAAATTAAGGTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000298690.5 |
||
| CDS-3UTR GCA 90 bp | ACTCGTTTCTTCATGAGTGAACTCTTACCTAGTTCACCGCTTGCCTCTGTAACAGGTAATGACCTTTATTaGAGCCAACACAGGGTAACT | + |
|
Preference number: 4 (lower is better) Translates to: TRFFMSELLPSSPLASVTGNDLY*SQHRVT Trigger: AGTTACCCTGTGTTGGCTGCAATAAAGGTCATTACC...TGTTACAGAGGCAAGCGGTGAACTAGGTAAGAGTTCACTCATGAAGAAACGAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000298690.5 ENST00000481538.1 |
||
| CDS-3UTR GCA 90 bp | AAAACCTTAATTTCCTCATCCATAAAGAAGGCATACAATCCCTGTCAAGTCTATTCCACAAATCCCATATaGCCCCTTTCCATTTATTTC | + |
|
Preference number: 4 (lower is better) Translates to: KTLISSSIKKAYNPCQVYSTNPI*PLSIYF Trigger: GAAATAAATGGAAAGGGGGCATATGGGATTTGTGGA...ATAGACTTGACAGGGATTGTATGCCTTCTTTATGGATGAGGAAATTAAGGTTTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000298690.5 |
||
| CDS TCA 90 bp | TCAGGATGGAGGGCAGGGGTCGCTTTGCGCTTGGTCTTCGTGCTGTaGCTCCTGCTCAGTGGGCTGAGGTGGTGTCCACGCACTCCTAGG | + |
|
Preference number: 5 (lower is better) Translates to: SGWRAGVALRLVFVL*LLLSGLRWCPRTPR Trigger: CCTAGGAGTGCGTGGACACCACCTCAGCCCACTGAGCAGGAGTCACAGCACGAAGACCAAGCGCAAAGCGACCCCTGCCCTCCATCCTGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000298690.5 ENST00000481538.1 |
||
| CDS-3UTR CAA 90 bp | ATGAGGGGAAGAGAATGCTCTGGGTGTAGGGGAGTGGTGCGGAGTCCTGGAGAGGATGAGGTCATGCCCTaGGGCTTGGCACTGACTGGG | + |
|
Preference number: 5 (lower is better) Translates to: MRGRECSGCRGVVRSPGEDEVMP*GLALTG Trigger: CCCAGTCAGTGCCAAGCCCAAGGGCATGACCTCATC...CTCTCCAGGACTCCGCACCACTCCCCTACACCCAGAGCATTCTCTTCCCCTCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000298690.5 ENST00000481538.1 |
||
| CDS-3UTR CAA 90 bp | TGCCCTAATGCCAGGGGGCAGGGGAGACATGTGCAATGGCATAGACCAGGGAACGTCATGCCCTTGGGCTaGGCACTGACTGGGATCTCT | + |
|
Preference number: 5 (lower is better) Translates to: CPNARGQGRHVQWHRPGNVMPLG*ALTGIS Trigger: AGAGATCCCAGTCAGTGCCAAGCCCAAGGGCATGAC...GTTCCCTGGTCTATGCCATTGCACATGTCTCCCCTGCCCCCTGGCATTAGGGCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000298690.5 |
||
| CDS-3UTR CAA 90 bp | AGGGGAGTGGTGCGGAGTCCTGGAGAGGGAATTGAAGGTCAGCCAAAGAGCAAGGATGAGGTCATGCCCTaGGGCTTGGCACTGACTGGG | + |
|
Preference number: 5 (lower is better) Translates to: RGVVRSPGEGIEGQPKSKDEVMP*GLALTG Trigger: CCCAGTCAGTGCCAAGCCCAAGGGCATGACCTCATC...CTTGCTCTTTGGCTGACCTTCAATTCCCTCTCCAGGACTCCGCACCACTCCCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000298690.5 ENST00000481538.1 |
||
| CDS-3UTR CAA 90 bp | GTGCGGAGTCCTGGAGAGGGAATTGAAGGTCAGCCAAAGAGCAAGCCAGTCTGGTTCTGTCGCTTCTCTTaGTACCTGCAGTTCGGATGC | + |
|
Preference number: 5 (lower is better) Translates to: VRSPGEGIEGQPKSKPVWFCRFS*YLQFGC Trigger: GCATCCGAACTGCAGGTACAAAGAGAAGCGACAGAA...CCAGACTGGCTTGCTCTTTGGCTGACCTTCAATTCCCTCTCCAGGACTCCGCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000298690.5 ENST00000481538.1 |
||
| CDS-3UTR CAA 90 bp | TGCCCTAATGCCAGGGGGCAGGGGAGACATGTGCAATGGCATAGACCAGGGAACAGGAACCAGGTGGAATaGCTGAGAGTCCTTTTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: CPNARGQGRHVQWHRPGNRNQVE*LRVLFL Trigger: CAGAAAAAGGACTCTCAGCAATTCCACCTGGTTCCT...GTTCCCTGGTCTATGCCATTGCACATGTCTCCCCTGCCCCCTGGCATTAGGGCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000298690.5 |
||
| CDS-3UTR CAA 90 bp | CTTGCCTCTGTAACAGTGACTTCTTTCTTGCGCAACAGAGTGTCAGCTTCAGCCGTCATGCCCTTGGGCTaGGCACTGACTGGGATCTCT | + |
|
Preference number: 5 (lower is better) Translates to: LASVTVTSFLRNRVSASAVMPLG*ALTGIS Trigger: AGAGATCCCAGTCAGTGCCAAGCCCAAGGGCATGAC...GGCTGAAGCTGACACTCTGTTGCGCAAGAAAGAAGTCACTGTTACAGAGGCAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000481538.1 |
||
| CDS-3UTR CAA 90 bp | CTGAACCAGGAACAGCCCCAAGAGATGAGGGGAAGAGAATGCTCTGGGTGTAGGACAGTGACTTCTTTCTaGCGCAACAGAGTGTCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: LNQEQPQEMRGRECSGCRTVTSF*RNRVSA Trigger: AGCTGACACTCTGTTGCGCAAGAAAGAAGTCACTGT...CCTACACCCAGAGCATTCTCTTCCCCTCATCTCTTGGGGCTGTTCCTGGTTCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000481538.1 |
||
| CDS CCA 90 bp | AGTCCTGGAGAGGGAATTGAAGGTCAGCCAAAGAGCAAGCCAGTCTaGAAACCTAAAGGACTCTGTCCAAGTGTACAGGAACCAGGTGGA | + |
|
Preference number: 5 (lower is better) Translates to: SPGEGIEGQPKSKPV*KPKGLCPSVQEPGG Trigger: TCCACCTGGTTCCTGTACACTTGGACAGAGTCCTTTAGGTTTCCAGACTGGCTTGCTCTTTGGCTGACCTTCAATTCCCTCTCCAGGACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000298690.5 ENST00000481538.1 |
||
| CDS-3UTR CAA 90 bp | CTTGCCTCTGTAACAGTGACTTCTTTCTTGCGCAACAGAGTGTCAGCTTCAGCCAGGAACCAGGTGGAATaGCTGAGAGTCCTTTTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: LASVTVTSFLRNRVSASARNQVE*LRVLFL Trigger: CAGAAAAAGGACTCTCAGCAATTCCACCTGGTTCCT...GGCTGAAGCTGACACTCTGTTGCGCAAGAAAGAAGTCACTGTTACAGAGGCAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000481538.1 |
||
| CDS-3UTR CAA 90 bp | AATGACCTTTATTGCAGCCAACACAGGGTAACTGGCTCTTCAGAGCACTCGTTTCCCACAGACCTGAGCTaGCTGTTTCTTGGGGATAAG | + |
|
Preference number: 5 (lower is better) Translates to: NDLYCSQHRVTGSSEHSFPTDLS*LFLGDK Trigger: CTTATCCCCAAGAAACAGCAAGCTCAGGTCTGTGGG...AAACGAGTGCTCTGAAGAGCCAGTTACCCTGTGTTGGCTGCAATAAAGGTCATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000298690.5 |
||
| CDS-3UTR CAA 90 bp | AATGACCTTTATTGCAGCCAACACAGGGTAACTGGCTCTTCAGAGCACTCGTTTTTCTGTCGCTTCTCTTaGTACCTGCAGTTCGGATGC | + |
|
Preference number: 5 (lower is better) Translates to: NDLYCSQHRVTGSSEHSFFCRFS*YLQFGC Trigger: GCATCCGAACTGCAGGTACAAAGAGAAGCGACAGAA...AAACGAGTGCTCTGAAGAGCCAGTTACCCTGTGTTGGCTGCAATAAAGGTCATT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000298690.5 ENST00000481538.1 |
||
| CDS-3UTR CAA 90 bp | TCAGGAACAGAAACAGCTGTGTCCACAAATCCCATATGCCCCCTTTCCATTTATATTTATTTCCTCTCCTaGTCATGCTGCCCTAATGCC | + |
|
Preference number: 5 (lower is better) Translates to: SGTETAVSTNPICPLSIYIYFLS*SCCPNA Trigger: GGCATTAGGGCAGCATGACAAGGAGAGGAAATAAAT...ATAAATGGAAAGGGGGCATATGGGATTTGTGGACACAGCTGTTTCTGTTCCTGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000298690.5 |
||
| CDS-3UTR CAA 90 bp | CGTTTCTTCATGAGTGAACTCTTACCTAGTTCACCGCTTGCCTCTGTAACAGTGCACCGTTTTGTGTGCTaGTTAATGTTTTTCATGGCT | + |
|
Preference number: 5 (lower is better) Translates to: RFFMSELLPSSPLASVTVHRFVC*LMFFMA Trigger: AGCCATGAAAAACATTAACAAGCACACAAAACGGTG...CACTGTTACAGAGGCAAGCGGTGAACTAGGTAAGAGTTCACTCATGAAGAAACG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000298690.5 ENST00000481538.1 |
||
| CDS TCA 72 bp | GCTTGGTCTTCGTGCTGTGACTCCTGCTCAGTGGGCTaGGGTGGTGTCCACGCACTCCTAGGCTGTCAGATC | + |
|
Preference number: 6 (lower is better) Translates to: AWSSCCDSCSVG*GGVHALLGCQI Trigger: GATCTGACAGCCTAGGAGTGCGTGGACACCACCTCAGCCCACTGAGCAGGAGTCACAGCACGAAGACCAAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000298690.5 ENST00000481538.1 |
||
| CDS CAA 90 bp | AATGCTCTGGGTGTAGGGGAGTGGTGCGGAGTCCTGGAGAGGGAATaGAAGGTCAGCCAAAGAGCAAGCCAGTCTGGAAACCTAAAGGAC | + |
|
Preference number: 6 (lower is better) Translates to: NALGVGEWCGVLERE*KVSQRASQSGNLKD Trigger: GTCCTTTAGGTTTCCAGACTGGCTTGCTCTTTGGCTGACCTTCAATTCCCTCTCCAGGACTCCGCACCACTCCCCTACACCCAGAGCATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000298690.5 ENST00000481538.1 |
||
| CDS TCA 72 bp | ACTCTGTCCAAGTGTACAGGAACCAGGTGGAATTGCTaGGAGTCCTTTTTCTGGGGAGGCTTACAGGCCACT | + |
|
Preference number: 6 (lower is better) Translates to: TLSKCTGTRWNC*ESFFWGGLQAT Trigger: AGTGGCCTGTAAGCCTCCCCAGAAAAAGGACTCTCAGCAATTCCACCTGGTTCCTGTACACTTGGACAGAGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000298690.5 ENST00000481538.1 |
||
| CDS CAA 72 bp | AAGGACTCTGTCCAAGTGTACAGGAACCAGGTGGAATaGCTGAGAGTCCTTTTTCTGGGGAGGCTTACAGGC | + |
|
Preference number: 6 (lower is better) Translates to: KDSVQVYRNQVE*LRVLFLGRLTG Trigger: GCCTGTAAGCCTCCCCAGAAAAAGGACTCTCAGCAATTCCACCTGGTTCCTGTACACTTGGACAGAGTCCTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000298690.5 ENST00000481538.1 |
||
| CDS CAA 90 bp | GGAAACCTAAAGGACTCTGTCCAAGTGTACAGGAACCAGGTGGAATaGCTGAGAGTCCTTTTTCTGGGGAGGCTTACAGGCCACTACGTA | + |
|
Preference number: 6 (lower is better) Translates to: GNLKDSVQVYRNQVE*LRVLFLGRLTGHYV Trigger: TACGTAGTGGCCTGTAAGCCTCCCCAGAAAAAGGACTCTCAGCAATTCCACCTGGTTCCTGTACACTTGGACAGAGTCCTTTAGGTTTCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000298690.5 ENST00000481538.1 |
||