Pregenerated sensors for RNASE6 (Homo sapiens)
Ensembl gene IDs: ENSG00000169413Ensembl transcript IDs: ENST00000304677.3
Found 49 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | AGCAGGAAGTGGTTTTATTGCTGTGAACACAGGGCAATAAAGCTTGGCAAAAGTGTCTCAACTCTGGTCTaGCATCCTAGGCACTCGAAT | + |
|
Preference number: 2 (lower is better) Translates to: SRKWFYCCEHRAIKLGKSVSTLV*HPRHSN Trigger: ATTCGAGTGCCTAGGATGCCAGACCAGAGTTGAGAC...ACTTTTGCCAAGCTTTATTGCCCTGTGTTCACAGCAATAAAACCACTTCCTGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000304677.3 |
||
| 3UTR-3UTR CCA 90 bp | GCTGTCTTCCCTATTCCCTTCTCTCGAAAAGTACAGAACTACAAAGCAGAAAATTTTTTGTCTCAACTCTaGTCTGGCATCCTAGGCACT | + |
|
Preference number: 2 (lower is better) Translates to: AVFPIPFSRKVQNYKAENFLSQL*SGILGT Trigger: AGTGCCTAGGATGCCAGACCAGAGTTGAGACAAAAA...ATTTTCTGCTTTGTAGTTCTGTACTTTTCGAGAGAAGGGAATAGGGAAGACAGC 42% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000304677.3 |
||
| 3UTR-3UTR TCA 90 bp | GCTGTCTTCCCTATTCCCTTCTCTCGAAAAGTACAGAACTACAAAGCAGAAAATAGAAGCTATGTCAAATaGAAGGAAATGCAGTGGATG | + |
|
Preference number: 2 (lower is better) Translates to: AVFPIPFSRKVQNYKAENRSYVK*KEMQWM Trigger: CATCCACTGCATTTCCTTTCATTTGACATAGCTTCT...ATTTTCTGCTTTGTAGTTCTGTACTTTTCGAGAGAAGGGAATAGGGAAGACAGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000304677.3 |
||
| 3UTR GCA 72 bp | TGCTGTGAACACAGGGCAATAAAGCTTGGCAAAAGTTaGAGGGTTAGAAATCTGAATCTTTCTTTGCTGTCT | + |
|
Preference number: 3 (lower is better) Translates to: CCEHRAIKLGKS*RVRNLNLSLLS Trigger: AGACAGCAAAGAAAGATTCAGATTTCTAACCCTGCAACTTTTGCCAAGCTTTATTGCCCTGTGTTCACAGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000304677.3 |
||
| CDS-3UTR TCA 90 bp | GTCTCAACTCTGGTCTGGCATCCTAGGCACTCGAATTCTCCAAACACCTTTCTTCGCTTAGGCCAAGCATaGAGTGGACACACTGGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: VSTLVWHPRHSNSPNTFLRLGQA*SGHTGP Trigger: GGGACCAGTGTGTCCACTTCATGCTTGGCCTAAGCG...AAGAAAGGTGTTTGGAGAATTCGAGTGCCTAGGATGCCAGACCAGAGTTGAGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000304677.3 |
||
| CDS-3UTR TCA 90 bp | CTTTTTGTCTCAACTCTGGTCTGGCATCCTAGGCACTCGAATTCTCCAAACACCCATGTTGACAGGCTTTaGGCTCTGGTGGCAGTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: LFVSTLVWHPRHSNSPNTHVDRL*ALVAVV Trigger: CACAACTGCCACCAGAGCTCAAAGCCTGTCAACATG...GGTGTTTGGAGAATTCGAGTGCCTAGGATGCCAGACCAGAGTTGAGACAAAAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000304677.3 |
||
| CDS-3UTR GCA 90 bp | CTTTTTGTCTCAACTCTGGTCTGGCATCCTAGGCACTCGAATTCTCCAAACACCGTTGATGCCACTCATTaGCCTGTTGCATTGGAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: LFVSTLVWHPRHSNSPNTVDATH*PVALER Trigger: CCTCTCCAATGCAACAGGGCAATGAGTGGCATCAAC...GGTGTTTGGAGAATTCGAGTGCCTAGGATGCCAGACCAGAGTTGAGACAAAAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000304677.3 |
||
| CDS-3UTR CCA 90 bp | CTTTTTGTCTCAACTCTGGTCTGGCATCCTAGGCACTCGAATTCTCCAAACACCGTCTCAACTCTGGTCTaGCATCCTAGGCACTCGAAT | + |
|
Preference number: 4 (lower is better) Translates to: LFVSTLVWHPRHSNSPNTVSTLV*HPRHSN Trigger: ATTCGAGTGCCTAGGATGCCAGACCAGAGTTGAGAC...GGTGTTTGGAGAATTCGAGTGCCTAGGATGCCAGACCAGAGTTGAGACAAAAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000304677.3 |
||
| CDS-3UTR TCA 90 bp | TTTGTCTCAACTCTGGTCTGGCATCCTAGGCACTCGAATTCTCCAAACACCTTTCTGGGGATACTTTCCTaGAGTGAGTCTGCAGTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: FVSTLVWHPRHSNSPNTFLGILS*SESAVS Trigger: ACTGACTGCAGACTCACTTCAGGAAAGTATCCCCAG...AAAGGTGTTTGGAGAATTCGAGTGCCTAGGATGCCAGACCAGAGTTGAGACAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000304677.3 |
||
| CDS-3UTR CCA 90 bp | GTCTCAACTCTGGTCTGGCATCCTAGGCACTCGAATTCTCCAAACACCTTTCTTATTGCCCTGTTGCATTaGAGAGGACTTGGCTGTATA | + |
|
Preference number: 4 (lower is better) Translates to: VSTLVWHPRHSNSPNTFLIALLH*RGLGCI Trigger: TATACAGCCAAGTCCTCTCCAATGCAACAGGGCAAT...AAGAAAGGTGTTTGGAGAATTCGAGTGCCTAGGATGCCAGACCAGAGTTGAGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000304677.3 |
||
| CDS-3UTR CCA 90 bp | GTCTCAACTCTGGTCTGGCATCCTAGGCACTCGAATTCTCCAAACACCTTTCTTACAGCAGCCACATTCTaGAAAGAGTCATGCAGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: VSTLVWHPRHSNSPNTFLTAATF*KESCRK Trigger: CTTTCTGCATGACTCTTTCCAGAATGTGGCTGCTGT...AAGAAAGGTGTTTGGAGAATTCGAGTGCCTAGGATGCCAGACCAGAGTTGAGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000304677.3 |
||
| CDS-3UTR GCA 90 bp | TGGTTTTATTGCTGTGAACACAGGGCAATAAAGCTTGGCAAAAGTTGCAGGGTTCACTCATTGCCCTGTTaGATTGGAGAGGACTTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: WFYCCEHRAIKLGKSCRVHSLPC*IGEDLA Trigger: AGCCAAGTCCTCTCCAATGCAACAGGGCAATGAGTG...AACCCTGCAACTTTTGCCAAGCTTTATTGCCCTGTGTTCACAGCAATAAAACCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000304677.3 |
||
| CDS-3UTR CCA 90 bp | GCTGTCTTCCCTATTCCCTTCTCTCGAAAAGTACAGAACTACAAAGCAGAAAATGGCTTTGAGCTCTGGTaGCAGTTGTGCCGACGATTT | + |
|
Preference number: 4 (lower is better) Translates to: AVFPIPFSRKVQNYKAENGFELW*QLCRRF Trigger: AAATCGTCGGCACAACTGCCACCAGAGCTCAAAGCC...ATTTTCTGCTTTGTAGTTCTGTACTTTTCGAGAGAAGGGAATAGGGAAGACAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000304677.3 |
||
| CDS-3UTR GCA 90 bp | GCTGTCTTCCCTATTCCCTTCTCTCGAAAAGTACAGAACTACAAAGCAGAAAATCTCTGGTGGCAGTTGTaGCGACGATTTTTGCAGACA | + |
|
Preference number: 4 (lower is better) Translates to: AVFPIPFSRKVQNYKAENLWWQL*RRFLQT Trigger: TGTCTGCAAAAATCGTCGGCACAACTGCCACCAGAG...ATTTTCTGCTTTGTAGTTCTGTACTTTTCGAGAGAAGGGAATAGGGAAGACAGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000304677.3 |
||
| CDS-3UTR CCA 90 bp | ATAAAGCTTGGCAAAAGTTGCAGGGTTAGAAATCTGAATCTTTCTTTGCTGTCTACAGGCTTTGAGCTCTaGTGGCAGTTGTGCCGACGA | + |
|
Preference number: 4 (lower is better) Translates to: IKLGKSCRVRNLNLSLLSTGFEL*WQLCRR Trigger: TCGTCGGCACAACTGCCACCAGAGCTCAAAGCCTGT...AGACAGCAAAGAAAGATTCAGATTTCTAACCCTGCAACTTTTGCCAAGCTTTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000304677.3 |
||
| CDS-3UTR TCA 90 bp | GCTGTCTTCCCTATTCCCTTCTCTCGAAAAGTACAGAACTACAAAGCAGAAAATGCTGGGTATAATTGTTaGTGCCACTCATTGCCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: AVFPIPFSRKVQNYKAENAGYNC*CHSLPC Trigger: ACAGGGCAATGAGTGGCATCAACAATTATACCCAGC...ATTTTCTGCTTTGTAGTTCTGTACTTTTCGAGAGAAGGGAATAGGGAAGACAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000304677.3 |
||
| CDS-3UTR TCA 90 bp | AGCAGGAAGTGGTTTTATTGCTGTGAACACAGGGCAATAAAGCTTGGCAAAAGTTTTTGCAGACAATGCTaGGCAAATCACAGACAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: SRKWFYCCEHRAIKLGKSFCRQC*ANHRQQ Trigger: CTGCTGTCTGTGATTTGCTCAGCATTGTCTGCAAAA...ACTTTTGCCAAGCTTTATTGCCCTGTGTTCACAGCAATAAAACCACTTCCTGCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000304677.3 |
||
| CDS-3UTR GCA 90 bp | CTTTTTGTCTCAACTCTGGTCTGGCATCCTAGGCACTCGAATTCTCCAAACACCAGGAAATGCAGTGGATaGCTTAGAGAATACTATCTA | + |
|
Preference number: 4 (lower is better) Translates to: LFVSTLVWHPRHSNSPNTRKCSG*LREYYL Trigger: TAGATAGTATTCTCTAAGGCATCCACTGCATTTCCT...GGTGTTTGGAGAATTCGAGTGCCTAGGATGCCAGACCAGAGTTGAGACAAAAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000304677.3 |
||
| CDS-3UTR GCA 90 bp | GTCTCAACTCTGGTCTGGCATCCTAGGCACTCGAATTCTCCAAACACCTTTCTTTCAAATGAAAGGAAATaGAGTGGATGCCTTAGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: VSTLVWHPRHSNSPNTFLSNERK*SGCLRE Trigger: TTCTCTAAGGCATCCACTGCATTTCCTTTCATTTGA...AAGAAAGGTGTTTGGAGAATTCGAGTGCCTAGGATGCCAGACCAGAGTTGAGAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000304677.3 |
||
| CDS-3UTR GCA 90 bp | GTCTCAACTCTGGTCTGGCATCCTAGGCACTCGAATTCTCCAAACACCTTTCTTAAGCTTGGCAAAAGTTaGAGGGTTAGAAATCTGAAT | + |
|
Preference number: 4 (lower is better) Translates to: VSTLVWHPRHSNSPNTFLKLGKS*RVRNLN Trigger: ATTCAGATTTCTAACCCTGCAACTTTTGCCAAGCTT...AAGAAAGGTGTTTGGAGAATTCGAGTGCCTAGGATGCCAGACCAGAGTTGAGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000304677.3 |
||
| CDS-3UTR TCA 90 bp | TGGTTTTATTGCTGTGAACACAGGGCAATAAAGCTTGGCAAAAGTTGCAGGGTTGTGGTTTTATTGCTGTaGACACAGGGCAATAAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: WFYCCEHRAIKLGKSCRVVVLLL*TQGNKA Trigger: AGCTTTATTGCCCTGTGTTCACAGCAATAAAACCAC...AACCCTGCAACTTTTGCCAAGCTTTATTGCCCTGTGTTCACAGCAATAAAACCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000304677.3 |
||
| CDS-3UTR CCA 90 bp | TGGTTTTATTGCTGTGAACACAGGGCAATAAAGCTTGGCAAAAGTTGCAGGGTTGCATTGGAGAGGACTTaGCTGTATATGCTGAATTTC | + |
|
Preference number: 4 (lower is better) Translates to: WFYCCEHRAIKLGKSCRVALERT*LYMLNF Trigger: GAAATTCAGCATATACAGCCAAGTCCTCTCCAATGC...AACCCTGCAACTTTTGCCAAGCTTTATTGCCCTGTGTTCACAGCAATAAAACCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000304677.3 |
||
| CDS-3UTR TCA 90 bp | TGGTTTTATTGCTGTGAACACAGGGCAATAAAGCTTGGCAAAAGTTGCAGGGTTAGAAGCTATGTCAAATaGAAGGAAATGCAGTGGATG | + |
|
Preference number: 4 (lower is better) Translates to: WFYCCEHRAIKLGKSCRVRSYVK*KEMQWM Trigger: CATCCACTGCATTTCCTTTCATTTGACATAGCTTCT...AACCCTGCAACTTTTGCCAAGCTTTATTGCCCTGTGTTCACAGCAATAAAACCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000304677.3 |
||
| CDS-3UTR GCA 90 bp | GCTGTCTTCCCTATTCCCTTCTCTCGAAAAGTACAGAACTACAAAGCAGAAAATAGGAAGTGGTTTTATTaGTGTGAACACAGGGCAATA | + |
|
Preference number: 4 (lower is better) Translates to: AVFPIPFSRKVQNYKAENRKWFY*CEHRAI Trigger: TATTGCCCTGTGTTCACAGCAATAAAACCACTTCCT...ATTTTCTGCTTTGTAGTTCTGTACTTTTCGAGAGAAGGGAATAGGGAAGACAGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000304677.3 |
||
| CDS-3UTR TCA 90 bp | CTCCAAACACCTTTCTTCTTTCTTCTACGGGAACAAGAAAATCAACAAAAGAAAGATACTTTCCTGAAGTaGGTCTGCAGTCAGTCATGT | + |
|
Preference number: 4 (lower is better) Translates to: LQTPFFFLLREQENQQKKDTFLK*VCSQSC Trigger: ACATGACTGACTGCAGACTCACTTCAGGAAAGTATC...TTTCTTTTGTTGATTTTCTTGTTCCCGTAGAAGAAAGAAGAAAGGTGTTTGGAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000304677.3 |
||
| CDS GCA 90 bp | CTGCAGTCAGTCATGTTGACAGGCTTTGAGCTCTGGTGGCAGTTGTaGCGACGATTTTTGCAGACAATGCTGAGCAAATCACAGACAGCA | + |
|
Preference number: 5 (lower is better) Translates to: LQSVMLTGFELWWQL*RRFLQTMLSKSQTA Trigger: TGCTGTCTGTGATTTGCTCAGCATTGTCTGCAAAAATCGTCGGCACAACTGCCACCAGAGCTCAAAGCCTGTCAACATGACTGACTGCAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000304677.3 |
||
| CDS CCA 90 bp | CCTGAAGTGAGTCTGCAGTCAGTCATGTTGACAGGCTTTGAGCTCTaGTGGCAGTTGTGCCGACGATTTTTGCAGACAATGCTGAGCAAA | + |
|
Preference number: 5 (lower is better) Translates to: PEVSLQSVMLTGFEL*WQLCRRFLQTMLSK Trigger: TTTGCTCAGCATTGTCTGCAAAAATCGTCGGCACAACTGCCACCAGAGCTCAAAGCCTGTCAACATGACTGACTGCAGACTCACTTCAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000304677.3 |
||
| CDS-3UTR CAA 90 bp | CTTTTTGTCTCAACTCTGGTCTGGCATCCTAGGCACTCGAATTCTCCAAACACCCTGCAGTCAGTCATGTaGACAGGCTTTGAGCTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: LFVSTLVWHPRHSNSPNTLQSVM*TGFELW Trigger: CCAGAGCTCAAAGCCTGTCAACATGACTGACTGCAG...GGTGTTTGGAGAATTCGAGTGCCTAGGATGCCAGACCAGAGTTGAGACAAAAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000304677.3 |
||
| CDS TCA 90 bp | TTGAGCTCTGGTGGCAGTTGTGCCGACGATTTTTGCAGACAATGCTaGGCAAATCACAGACAGCAGCCACATTCTGGAAAGAGTCATGCA | + |
|
Preference number: 5 (lower is better) Translates to: LSSGGSCADDFCRQC*ANHRQQPHSGKSHA Trigger: TGCATGACTCTTTCCAGAATGTGGCTGCTGTCTGTGATTTGCTCAGCATTGTCTGCAAAAATCGTCGGCACAACTGCCACCAGAGCTCAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000304677.3 |
||
| CDS CCA 90 bp | GAAGTGAGTCTGCAGTCAGTCATGTTGACAGGCTTTGAGCTCTGGTaGCAGTTGTGCCGACGATTTTTGCAGACAATGCTGAGCAAATCA | + |
|
Preference number: 5 (lower is better) Translates to: EVSLQSVMLTGFELW*QLCRRFLQTMLSKS Trigger: TGATTTGCTCAGCATTGTCTGCAAAAATCGTCGGCACAACTGCCACCAGAGCTCAAAGCCTGTCAACATGACTGACTGCAGACTCACTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000304677.3 |
||
| CDS-3UTR CAA 90 bp | TGGTTTTATTGCTGTGAACACAGGGCAATAAAGCTTGGCAAAAGTTGCAGGGTTCCACTCATTGCCCTGTaGCATTGGAGAGGACTTGGC | + |
|
Preference number: 5 (lower is better) Translates to: WFYCCEHRAIKLGKSCRVPLIAL*HWRGLG Trigger: GCCAAGTCCTCTCCAATGCAACAGGGCAATGAGTGG...AACCCTGCAACTTTTGCCAAGCTTTATTGCCCTGTGTTCACAGCAATAAAACCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000304677.3 |
||
| CDS TCA 90 bp | CATGCAGAAAGGTATTTTGATGCTTACAGTGCTGGGTATAATTGTTaGTGCCACTCATTGCCCTGTTGCATTGGAGAGGACTTGGCTGTA | + |
|
Preference number: 5 (lower is better) Translates to: HAERYFDAYSAGYNC*CHSLPCCIGEDLAV Trigger: TACAGCCAAGTCCTCTCCAATGCAACAGGGCAATGAGTGGCATCAACAATTATACCCAGCACTGTAAGCATCAAAATACCTTTCTGCATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000304677.3 |
||
| CDS-3UTR CAA 90 bp | ATAAAGCTTGGCAAAAGTTGCAGGGTTAGAAATCTGAATCTTTCTTTGCTGTCTTTTCTGGTCTCAGTGTaGGGGCTCCTGCTGAGAACA | + |
|
Preference number: 5 (lower is better) Translates to: IKLGKSCRVRNLNLSLLSFLVSV*GLLLRT Trigger: TGTTCTCAGCAGGAGCCCCAACACTGAGACCAGAAA...AGACAGCAAAGAAAGATTCAGATTTCTAACCCTGCAACTTTTGCCAAGCTTTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000304677.3 |
||
| CDS-3UTR CAA 90 bp | CTCCAAACACCTTTCTTCTTTCTTCTACGGGAACAAGAAAATCAACAAAAGAAAGAGCTCTGGTGGCAGTaGTGCCGACGATTTTTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: LQTPFFFLLREQENQQKKELWWQ*CRRFLQ Trigger: CTGCAAAAATCGTCGGCACAACTGCCACCAGAGCTC...TTTCTTTTGTTGATTTTCTTGTTCCCGTAGAAGAAAGAAGAAAGGTGTTTGGAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000304677.3 |
||
| CDS-3UTR CAA 90 bp | AGCAGGAAGTGGTTTTATTGCTGTGAACACAGGGCAATAAAGCTTGGCAAAAGTGCAACAATGAAGAATTaGTACTGGGCAGCAGCACTA | + |
|
Preference number: 5 (lower is better) Translates to: SRKWFYCCEHRAIKLGKSATMKN*YWAAAL Trigger: TAGTGCTGCTGCCCAGTACAAATTCTTCATTGTTGC...ACTTTTGCCAAGCTTTATTGCCCTGTGTTCACAGCAATAAAACCACTTCCTGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000304677.3 |
||
| CDS GCA 90 bp | ATTTTGATGCTTACAGTGCTGGGTATAATTGTTGATGCCACTCATTaGCCTGTTGCATTGGAGAGGACTTGGCTGTATATGCTGAATTTC | + |
|
Preference number: 5 (lower is better) Translates to: ILMLTVLGIIVDATH*PVALERTWLYMLNF Trigger: GAAATTCAGCATATACAGCCAAGTCCTCTCCAATGCAACAGGGCAATGAGTGGCATCAACAATTATACCCAGCACTGTAAGCATCAAAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000304677.3 |
||
| CDS-3UTR CAA 90 bp | AGCAGGAAGTGGTTTTATTGCTGTGAACACAGGGCAATAAAGCTTGGCAAAAGTATGCAGAAAGGTATTTaGATGCTTACAGTGCTGGGT | + |
|
Preference number: 5 (lower is better) Translates to: SRKWFYCCEHRAIKLGKSMQKGI*MLTVLG Trigger: ACCCAGCACTGTAAGCATCAAAATACCTTTCTGCAT...ACTTTTGCCAAGCTTTATTGCCCTGTGTTCACAGCAATAAAACCACTTCCTGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000304677.3 |
||
| CDS-3UTR CAA 90 bp | CTCCAAACACCTTTCTTCTTTCTTCTACGGGAACAAGAAAATCAACAAAAGAAACATTGCCCTGTTGCATaGGAGAGGACTTGGCTGTAT | + |
|
Preference number: 5 (lower is better) Translates to: LQTPFFFLLREQENQQKKHCPVA*ERTWLY Trigger: ATACAGCCAAGTCCTCTCCAATGCAACAGGGCAATG...TTTCTTTTGTTGATTTTCTTGTTCCCGTAGAAGAAAGAAGAAAGGTGTTTGGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000304677.3 |
||
| CDS-3UTR CAA 90 bp | ATAAAGCTTGGCAAAAGTTGCAGGGTTAGAAATCTGAATCTTTCTTTGCTGTCTTTGTGCCGACGATTTTaGCAGACAATGCTGAGCAAA | + |
|
Preference number: 5 (lower is better) Translates to: IKLGKSCRVRNLNLSLLSLCRRF*QTMLSK Trigger: TTTGCTCAGCATTGTCTGCAAAAATCGTCGGCACAA...AGACAGCAAAGAAAGATTCAGATTTCTAACCCTGCAACTTTTGCCAAGCTTTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000304677.3 |
||
| CDS GCA 90 bp | GCAATTGTAACAGAAGCTATGTCAAATGAAAGGAAATGCAGTGGATaGCTTAGAGAATACTATCTAAGTGTACAGGAACCAACTTGTAGG | + |
|
Preference number: 5 (lower is better) Translates to: AIVTEAMSNERKCSG*LREYYLSVQEPTCR Trigger: CCTACAAGTTGGTTCCTGTACACTTAGATAGTATTCTCTAAGGCATCCACTGCATTTCCTTTCATTTGACATAGCTTCTGTTACAATTGC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000304677.3 |
||
| CDS CAA 90 bp | CGGCACTGGGGATACTTTCCTGAAGTGAGTCTGCAGTCAGTCATGTaGACAGGCTTTGAGCTCTGGTGGCAGTTGTGCCGACGATTTTTG | + |
|
Preference number: 6 (lower is better) Translates to: RHWGYFPEVSLQSVM*TGFELWWQLCRRFL Trigger: CAAAAATCGTCGGCACAACTGCCACCAGAGCTCAAAGCCTGTCAACATGACTGACTGCAGACTCACTTCAGGAAAGTATCCCCAGTGCCG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000304677.3 |
||
| CDS CCA 72 bp | CTGCAGTCAGTCATGTTGACAGGCTTTGAGCTCTGGTaGCAGTTGTGCCGACGATTTTTGCAGACAATGCTG | + |
|
Preference number: 6 (lower is better) Translates to: LQSVMLTGFELW*QLCRRFLQTML Trigger: CAGCATTGTCTGCAAAAATCGTCGGCACAACTGCCACCAGAGCTCAAAGCCTGTCAACATGACTGACTGCAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000304677.3 |
||
| CDS CCA 72 bp | AGTCTGCAGTCAGTCATGTTGACAGGCTTTGAGCTCTaGTGGCAGTTGTGCCGACGATTTTTGCAGACAATG | + |
|
Preference number: 6 (lower is better) Translates to: SLQSVMLTGFEL*WQLCRRFLQTM Trigger: CATTGTCTGCAAAAATCGTCGGCACAACTGCCACCAGAGCTCAAAGCCTGTCAACATGACTGACTGCAGACT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000304677.3 |
||
| CDS CAA 90 bp | AGTCTGCAGTCAGTCATGTTGACAGGCTTTGAGCTCTGGTGGCAGTaGTGCCGACGATTTTTGCAGACAATGCTGAGCAAATCACAGACA | + |
|
Preference number: 6 (lower is better) Translates to: SLQSVMLTGFELWWQ*CRRFLQTMLSKSQT Trigger: TGTCTGTGATTTGCTCAGCATTGTCTGCAAAAATCGTCGGCACAACTGCCACCAGAGCTCAAAGCCTGTCAACATGACTGACTGCAGACT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000304677.3 |
||
| CDS GCA 72 bp | CTTACAGTGCTGGGTATAATTGTTGATGCCACTCATTaGCCTGTTGCATTGGAGAGGACTTGGCTGTATATG | + |
|
Preference number: 6 (lower is better) Translates to: LTVLGIIVDATH*PVALERTWLYM Trigger: CATATACAGCCAAGTCCTCTCCAATGCAACAGGGCAATGAGTGGCATCAACAATTATACCCAGCACTGTAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000304677.3 |
||
| CDS TCA 72 bp | AGGTATTTTGATGCTTACAGTGCTGGGTATAATTGTTaGTGCCACTCATTGCCCTGTTGCATTGGAGAGGAC | + |
|
Preference number: 6 (lower is better) Translates to: RYFDAYSAGYNC*CHSLPCCIGED Trigger: GTCCTCTCCAATGCAACAGGGCAATGAGTGGCATCAACAATTATACCCAGCACTGTAAGCATCAAAATACCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000304677.3 |
||
| CDS CAA 90 bp | ACAGACAGCAGCCACATTCTGGAAAGAGTCATGCAGAAAGGTATTTaGATGCTTACAGTGCTGGGTATAATTGTTGATGCCACTCATTGC | + |
|
Preference number: 6 (lower is better) Translates to: TDSSHILERVMQKGI*MLTVLGIIVDATHC Trigger: GCAATGAGTGGCATCAACAATTATACCCAGCACTGTAAGCATCAAAATACCTTTCTGCATGACTCTTTCCAGAATGTGGCTGCTGTCTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000304677.3 |
||
| CDS CAA 72 bp | GGTATAATTGTTGATGCCACTCATTGCCCTGTTGCATaGGAGAGGACTTGGCTGTATATGCTGAATTTCAAA | + |
|
Preference number: 6 (lower is better) Translates to: GIIVDATHCPVA*ERTWLYMLNFK Trigger: TTTGAAATTCAGCATATACAGCCAAGTCCTCTCCAATGCAACAGGGCAATGAGTGGCATCAACAATTATACC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000304677.3 |
||
| CDS CAA 72 bp | AGCCACATTCTGGAAAGAGTCATGCAGAAAGGTATTTaGATGCTTACAGTGCTGGGTATAATTGTTGATGCC | + |
|
Preference number: 6 (lower is better) Translates to: SHILERVMQKGI*MLTVLGIIVDA Trigger: GGCATCAACAATTATACCCAGCACTGTAAGCATCAAAATACCTTTCTGCATGACTCTTTCCAGAATGTGGCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000304677.3 |
||