Pregenerated sensors for RNASE12 (Homo sapiens)
Ensembl gene IDs: ENSG00000258436Ensembl transcript IDs: ENST00000556526.1
Found 11 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | TCCACGGTCCAGGTCTGCCTCAGGCACAGCCAGCTCCAATGCCATTaGGAGAAGAGATCTCAGACTCGGGAGCTGATCTTGAGTTATTTA | + |
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Preference number: 5 (lower is better) Translates to: STVQVCLRHSQLQCH*EKRSQTRELILSYL Trigger: TAAATAACTCAAGATCAGCTCCCGAGTCTGAGATCTCTTCTCTCAATGGCATTGGAGCTGGCTGTGCCTGAGGCAGACCTGGACCGTGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000556526.1 |
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| CDS GCA 90 bp | AGGTTCCCTGATAACTCTTTGTATGATCATGTGGTTGCAGTACCTTaGAGGAACGGGAACGTCATTCTGAGGGTAGTCCACATGCAAGTG | + |
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Preference number: 5 (lower is better) Translates to: RFPDNSLYDHVVAVP*RNGNVILRVVHMQV Trigger: CACTTGCATGTGGACTACCCTCAGAATGACGTTCCCGTTCCTGCAAGGTACTGCAACCACATGATCATACAAAGAGTTATCAGGGAACCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000556526.1 |
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| CDS GCA 90 bp | ATGCAAATACCATTGATTTTTCGAGGCCTCTCATGGATGAAGACATaGTCCTTTTTACAAGTGTGGTCAGGTTCCCTGATAACTCTTTGT | + |
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Preference number: 5 (lower is better) Translates to: MQIPLIFRGLSWMKT*SFLQVWSGSLITLC Trigger: ACAAAGAGTTATCAGGGAACCTGACCACACTTGTAAAAAGGAGCATGTCTTCATCCATGAGAGGCCTCGAAAAATCAATGGTATTTGCAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000556526.1 |
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| CDS CAA 90 bp | GACATGCTCCTTTTTACAAGTGTGGTCAGGTTCCCTGATAACTCTTaGTATGATCATGTGGTTGCAGTACCTTGCAGGAACGGGAACGTC | + |
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Preference number: 6 (lower is better) Translates to: DMLLFTSVVRFPDNS*YDHVVAVPCRNGNV Trigger: GACGTTCCCGTTCCTGCAAGGTACTGCAACCACATGATCATACAAAGAGTTATCAGGGAACCTGACCACACTTGTAAAAAGGAGCATGTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000556526.1 |
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| CDS GCA 72 bp | GATAACTCTTTGTATGATCATGTGGTTGCAGTACCTTaGAGGAACGGGAACGTCATTCTGAGGGTAGTCCAC | + |
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Preference number: 6 (lower is better) Translates to: DNSLYDHVVAVP*RNGNVILRVVH Trigger: GTGGACTACCCTCAGAATGACGTTCCCGTTCCTGCAAGGTACTGCAACCACATGATCATACAAAGAGTTATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000556526.1 |
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| CDS CCA 72 bp | TGGTCAGGTTCCCTGATAACTCTTTGTATGATCATGTaGTTGCAGTACCTTGCAGGAACGGGAACGTCATTC | + |
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Preference number: 6 (lower is better) Translates to: WSGSLITLCMIM*LQYLAGTGTSF Trigger: GAATGACGTTCCCGTTCCTGCAAGGTACTGCAACCACATGATCATACAAAGAGTTATCAGGGAACCTGACCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000556526.1 |
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| CDS CAA 90 bp | CGGGAACGTCATTCTGAGGGTAGTCCACATGCAAGTGTTCTAAAGTaGACATCACTGCTTCATCATTCACCTCATTTTCCCAGAACAGAA | + |
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Preference number: 6 (lower is better) Translates to: RERHSEGSPHASVLK*TSLLHHSPHFPRTE Trigger: TTCTGTTCTGGGAAAATGAGGTGAATGATGAAGCAGTGATGTCAACTTTAGAACACTTGCATGTGGACTACCCTCAGAATGACGTTCCCG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000556526.1 |
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| CDS GCA 72 bp | CCATTGATTTTTCGAGGCCTCTCATGGATGAAGACATaGTCCTTTTTACAAGTGTGGTCAGGTTCCCTGATA | + |
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Preference number: 6 (lower is better) Translates to: PLIFRGLSWMKT*SFLQVWSGSLI Trigger: TATCAGGGAACCTGACCACACTTGTAAAAAGGAGCATGTCTTCATCCATGAGAGGCCTCGAAAAATCAATGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000556526.1 |
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| CDS CAA 72 bp | CTTTTTACAAGTGTGGTCAGGTTCCCTGATAACTCTTaGTATGATCATGTGGTTGCAGTACCTTGCAGGAAC | + |
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Preference number: 6 (lower is better) Translates to: LFTSVVRFPDNS*YDHVVAVPCRN Trigger: GTTCCTGCAAGGTACTGCAACCACATGATCATACAAAGAGTTATCAGGGAACCTGACCACACTTGTAAAAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000556526.1 |
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| CDS CCA 72 bp | CTCTCATGGATGAAGACATGCTCCTTTTTACAAGTGTaGTCAGGTTCCCTGATAACTCTTTGTATGATCATG | + |
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Preference number: 6 (lower is better) Translates to: LSWMKTCSFLQV*SGSLITLCMIM Trigger: CATGATCATACAAAGAGTTATCAGGGAACCTGACCACACTTGTAAAAAGGAGCATGTCTTCATCCATGAGAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000556526.1 |
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| CDS CCA 72 bp | GAAATGCAAATACCATTGATTTTTCGAGGCCTCTCATaGATGAAGACATGCTCCTTTTTACAAGTGTGGTCA | + |
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Preference number: 6 (lower is better) Translates to: EMQIPLIFRGLS*MKTCSFLQVWS Trigger: TGACCACACTTGTAAAAAGGAGCATGTCTTCATCCATGAGAGGCCTCGAAAAATCAATGGTATTTGCATTTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000556526.1 |
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