RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RMND5B (Homo sapiens)

Ensembl gene IDs: ENSG00000145916

Ensembl transcript IDs: ENST00000313386.9, ENST00000502814.5, ENST00000507457.5, ENST00000507575.5, ENST00000507937.1, ENST00000508647.5, ENST00000512663.5, ENST00000512811.5, ENST00000513162.5, ENST00000515098.5, ENST00000515360.5, ENST00000542098.2

Found 564 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AGACAGCAGGAGCACAGAGGCCAGCATCTCCCTTTCCTTATGCCATaGAGCCAGGTGCCAGGCGTGGGCTGGTCCATCTCCCTCCTCAGC +
Preference number: 1 (lower is better)
Translates to: RQQEHRGQHLPFLMP*SQVPGVGWSISLLS
Trigger: GCTGAGGAGGGAGATGGACCAGCCCACGCCTGGCACCTGGCTCCATGGCATAAGGAAAGGGAGATGCTGGCCTCTGTGCTCCTGCTGTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313386.9
ENST00000515098.5
ENST00000542098.2
3UTR TCA 90 bp AGCAGCAGCTGCTGGTTGGGCCAGCGAGTTGGTGGGCGGGAAGAGTaGAGCAGTCTTCCTCAGCAGAGAGCCCAAAGGACTCAGAGGGTT +
Preference number: 1 (lower is better)
Translates to: SSSCWLGQRVGGREE*SSLPQQRAQRTQRV
Trigger: AACCCTCTGAGTCCTTTGGGCTCTCTGCTGAGGAAGACTGCTTCACTCTTCCCGCCCACCAACTCGCTGGCCCAACCAGCAGCTGCTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313386.9
ENST00000515098.5
3UTR TCA 90 bp GTTGATTCCTGGCACAGCTCCTCGGCCACGCTGAGCATGCCCTGCTaGTACAGGTGTTCCACGATGGCCATCTGCAGGATCTGCTGCTGC +
Preference number: 1 (lower is better)
Translates to: VDSWHSSSATLSMPC*YRCSTMAICRICCC
Trigger: GCAGCAGCAGATCCTGCAGATGGCCATCGTGGAACACCTGTATCAGCAGGGCATGCTCAGCGTGGCCGAGGAGCTGTGCCAGGAATCAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512811.5
3UTR CCA 90 bp CCGGGACAGCCCCTGCTGGGCTGGAGCCCTTTCATAGTTGCCATGTaGGAATGTAGGCCCTGTGTGGCTGGACCATGCCTTCAAAGTCTG +
Preference number: 1 (lower is better)
Translates to: PGQPLLGWSPFIVAM*ECRPCVAGPCLQSL
Trigger: CAGACTTTGAAGGCATGGTCCAGCCACACAGGGCCTACATTCCCACATGGCAACTATGAAAGGGCTCCAGCCCAGCAGGGGCTGTCCCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313386.9
ENST00000515098.5
3UTR TCA 90 bp GCTGCTCCAGTGCTCCCCTCAGTGGAACTCCTCAGCCAGGCGCTCTaGAACCAACCACAGTCCACTGAAGTTGACCACCCTACCGAGACA +
Preference number: 1 (lower is better)
Translates to: AAPVLPSVELLSQAL*NQPQSTEVDHPTET
Trigger: TGTCTCGGTAGGGTGGTCAACTTCAGTGGACTGTGGTTGGTTTCAGAGCGCCTGGCTGAGGAGTTCCACTGAGGGGAGCACTGGAGCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313386.9
ENST00000515098.5
ENST00000542098.2
3UTR GCA 90 bp GTCAGGGATGCAAGTTGTGTTCTTCCTGCCTGGACACTGGATACCTaGTGGCCATGTTTTTGTTTGCGGCAGCCACCAGGCCGTGCCCAG +
Preference number: 1 (lower is better)
Translates to: VRDASCVLPAWTLDT*WPCFCLRQPPGRAQ
Trigger: CTGGGCACGGCCTGGTGGCTGCCGCAAACAAAAACATGGCCAGCAGGTATCCAGTGTCCAGGCAGGAAGAACACAACTTGCATCCCTGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313386.9
ENST00000515098.5
3UTR CCA 90 bp AGGGATGCAAGTTGTGTTCTTCCTGCCTGGACACTGGATACCTGCTaGCCATGTTTTTGTTTGCGGCAGCCACCAGGCCGTGCCCAGTCC +
Preference number: 1 (lower is better)
Translates to: RDASCVLPAWTLDTC*PCFCLRQPPGRAQS
Trigger: GGACTGGGCACGGCCTGGTGGCTGCCGCAAACAAAAACATGGCCAGCAGGTATCCAGTGTCCAGGCAGGAAGAACACAACTTGCATCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313386.9
ENST00000515098.5
3UTR CCA 90 bp TCCCCGCAGTCAGGGATGCAAGTTGTGTTCTTCCTGCCTGGACACTaGATACCTGCTGGCCATGTTTTTGTTTGCGGCAGCCACCAGGCC +
Preference number: 1 (lower is better)
Translates to: SPQSGMQVVFFLPGH*IPAGHVFVCGSHQA
Trigger: GGCCTGGTGGCTGCCGCAAACAAAAACATGGCCAGCAGGTATCCAGTGTCCAGGCAGGAAGAACACAACTTGCATCCCTGACTGCGGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313386.9
ENST00000515098.5
3UTR CCA 90 bp GGGTGTTTTCTTAAGCAGCAGCTGCTGGTTGGGCCAGCGAGTTGGTaGGCGGGAAGAGTGAAGCAGTCTTCCTCAGCAGAGAGCCCAAAG +
Preference number: 1 (lower is better)
Translates to: GCFLKQQLLVGPASW*AGRVKQSSSAESPK
Trigger: CTTTGGGCTCTCTGCTGAGGAAGACTGCTTCACTCTTCCCGCCCACCAACTCGCTGGCCCAACCAGCAGCTGCTGCTTAAGAAAACACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313386.9
ENST00000515098.5
3UTR CCA 90 bp TGTGGGTGTTTTCTTAAGCAGCAGCTGCTGGTTGGGCCAGCGAGTTaGTGGGCGGGAAGAGTGAAGCAGTCTTCCTCAGCAGAGAGCCCA +
Preference number: 1 (lower is better)
Translates to: CGCFLKQQLLVGPAS*WAGRVKQSSSAESP
Trigger: TGGGCTCTCTGCTGAGGAAGACTGCTTCACTCTTCCCGCCCACCAACTCGCTGGCCCAACCAGCAGCTGCTGCTTAAGAAAACACCCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313386.9
ENST00000515098.5
3UTR TCA 90 bp ATGCTCAGCTGCCCAGGGCCGGGTGCTTTGGCTCAAGCTGAGAACTaGTCCTGCTGCTATCCCAGCATTTTCAACTCCCTCTTCCAGGGT +
Preference number: 1 (lower is better)
Translates to: MLSCPGPGALAQAEN*SCCYPSIFNSLFQG
Trigger: ACCCTGGAAGAGGGAGTTGAAAATGCTGGGATAGCAGCAGGATCAGTTCTCAGCTTGAGCCAAAGCACCCGGCCCTGGGCAGCTGAGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313386.9
ENST00000515098.5
3UTR CCA 90 bp CGAGGGGCAAGGGTGGACATAGCATTGGCATGGCAGCAAGAGACTTaGCTGAGGGCAGGGGTGGAAGGATGTCTACTGCTGAAGACCAAA +
Preference number: 1 (lower is better)
Translates to: RGARVDIALAWQQET*LRAGVEGCLLLKTK
Trigger: TTTGGTCTTCAGCAGTAGACATCCTTCCACCCCTGCCCTCAGCCAAGTCTCTTGCTGCCATGCCAATGCTATGTCCACCCTTGCCCCTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000313386.9
ENST00000515098.5
ENST00000542098.2
3UTR TCA 90 bp TGTGCTGATGCTCAGCTGCCCAGGGCCGGGTGCTTTGGCTCAAGCTaGGAACTGATCCTGCTGCTATCCCAGCATTTTCAACTCCCTCTT +
Preference number: 1 (lower is better)
Translates to: CADAQLPRAGCFGSS*ELILLLSQHFQLPL
Trigger: AAGAGGGAGTTGAAAATGCTGGGATAGCAGCAGGATCAGTTCTCAGCTTGAGCCAAAGCACCCGGCCCTGGGCAGCTGAGCATCAGCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313386.9
ENST00000515098.5
3UTR GCA 90 bp GGATACCTGCTGGCCATGTTTTTGTTTGCGGCAGCCACCAGGCCGTaGCCAGTCCCTGTGTGTGGTAGACATGTGGTCATAATTTGTCAG +
Preference number: 1 (lower is better)
Translates to: GYLLAMFLFAAATRP*PVPVCGRHVVIICQ
Trigger: CTGACAAATTATGACCACATGTCTACCACACACAGGGACTGGGCACGGCCTGGTGGCTGCCGCAAACAAAAACATGGCCAGCAGGTATCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313386.9
ENST00000515098.5
3UTR CCA 90 bp TCTAAGCTCCCCGCAGTCAGGGATGCAAGTTGTGTTCTTCCTGCCTaGACACTGGATACCTGCTGGCCATGTTTTTGTTTGCGGCAGCCA +
Preference number: 1 (lower is better)
Translates to: SKLPAVRDASCVLPA*TLDTCWPCFCLRQP
Trigger: TGGCTGCCGCAAACAAAAACATGGCCAGCAGGTATCCAGTGTCCAGGCAGGAAGAACACAACTTGCATCCCTGACTGCGGGGAGCTTAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313386.9
ENST00000515098.5
3UTR TCA 90 bp TGTGAATGTCCTTATGGTCCGAAGCCAGTTTCTGCACCGTATCTTTaGTCTTCCGGCAGCACTGTGACATCACCAGAGAGAGGGTGGCTG +
Preference number: 1 (lower is better)
Translates to: CECPYGPKPVSAPYL*SSGSTVTSPERGWL
Trigger: CAGCCACCCTCTCTCTGGTGATGTCACAGTGCTGCCGGAAGATCAAAGATACGGTGCAGAAACTGGCTTCGGACCATAAGGACATTCACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512663.5
3UTR GCA 90 bp TGTTCGTGCAGGGCTTCCAGGATTCGATTCAACTCTAGGAAAGGCTaGTTGAAATCCAAGTCCACATTCAGCGTTGATTCCTGGCACAGC +
Preference number: 1 (lower is better)
Translates to: CSCRASRIRFNSRKG*LKSKSTFSVDSWHS
Trigger: GCTGTGCCAGGAATCAACGCTGAATGTGGACTTGGATTTCAAGCAGCCTTTCCTAGAGTTGAATCGAATCCTGGAAGCCCTGCACGAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512811.5
3UTR TCA 90 bp AGCCAAGTTCAGGCACCCTGGAATAAACTGGAAATAGCTTGGGCTTaGGGGTCAGATCTGGTTAAAACTCCAAGCTCTCTCCTTTCTAAG +
Preference number: 1 (lower is better)
Translates to: SQVQAPWNKLEIAWA*GSDLVKTPSSLLSK
Trigger: CTTAGAAAGGAGAGAGCTTGGAGTTTTAACCAGATCTGACCCTCAAGCCCAAGCTATTTCCAGTTTATTCCAGGGTGCCTGAACTTGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313386.9
ENST00000515098.5
3UTR CCA 90 bp AGTTATAAAACAACGGCATTCCGTTCTAACTGGGACTATTTACAGTaGGAGATGGTACATACTGTTGAGGCTGTAGTGGGAGGAAGAGGT +
Preference number: 1 (lower is better)
Translates to: SYKTTAFRSNWDYLQ*EMVHTVEAVVGGRG
Trigger: ACCTCTTCCTCCCACTACAGCCTCAACAGTATGTACCATCTCCCACTGTAAATAGTCCCAGTTAGAACGGAATGCCGTTGTTTTATAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313386.9
ENST00000515098.5
ENST00000542098.2
3UTR TCA 90 bp TGTGGGAATGTAGGCCCTGTGTGGCTGGACCATGCCTTCAAAGTCTaGTTGAGTTTAAATGATGGCAACCAATTCAAGATGCTTTTAAAT +
Preference number: 1 (lower is better)
Translates to: CGNVGPVWLDHAFKV*LSLNDGNQFKMLLN
Trigger: ATTTAAAAGCATCTTGAATTGGTTGCCATCATTTAAACTCAATCAGACTTTGAAGGCATGGTCCAGCCACACAGGGCCTACATTCCCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313386.9
ENST00000515098.5
3UTR CCA 90 bp AATACATTTGTTCAAAGTTATAAAACAACGGCATTCCGTTCTAACTaGGACTATTTACAGTGGGAGATGGTACATACTGTTGAGGCTGTA +
Preference number: 1 (lower is better)
Translates to: NTFVQSYKTTAFRSN*DYLQWEMVHTVEAV
Trigger: TACAGCCTCAACAGTATGTACCATCTCCCACTGTAAATAGTCCCAGTTAGAACGGAATGCCGTTGTTTTATAACTTTGAACAAATGTATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313386.9
ENST00000515098.5
ENST00000542098.2
3UTR-3UTR GCA 90 bp GAGGAAGAGGTGGGCCACCGCTGGACACTCTTGGGCCGAGGGGCAAGGGTGGACCCTCTGCCAAAGGGCTaGTCCAGTGCTCCCCTCAGT +
Preference number: 2 (lower is better)
Translates to: EEEVGHRWTLLGRGARVDPLPKG*SSAPLS
Trigger: ACTGAGGGGAGCACTGGAGCAGCCCTTTGGCAGAGG...GTCCACCCTTGCCCCTCGGCCCAAGAGTGTCCAGCGGTGGCCCACCTCTTCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000313386.9
ENST00000515098.5
ENST00000542098.2
3UTR-3UTR CCA 90 bp AAGGACTCAGAGGGTTCTGTGCTGATGCTCAGCTGCCCAGGGCCGGGTGCTTTGGCCAGGTGCCAGGCGTaGGCTGGTCCATCTCCCTCC +
Preference number: 2 (lower is better)
Translates to: KDSEGSVLMLSCPGPGALARCQA*AGPSPS
Trigger: GGAGGGAGATGGACCAGCCCACGCCTGGCACCTGGC...CAAAGCACCCGGCCCTGGGCAGCTGAGCATCAGCACAGAACCCTCTGAGTCCTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313386.9
ENST00000515098.5
3UTR-3UTR CCA 90 bp GAGGAAGAGGTGGGCCACCGCTGGACACTCTTGGGCCGAGGGGCAAGGGTGGACCCTTTCCTTATGCCATaGAGCCAGGTGCCAGGCGTG +
Preference number: 2 (lower is better)
Translates to: EEEVGHRWTLLGRGARVDPFLMP*SQVPGV
Trigger: CACGCCTGGCACCTGGCTCCATGGCATAAGGAAAGG...GTCCACCCTTGCCCCTCGGCCCAAGAGTGTCCAGCGGTGGCCCACCTCTTCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313386.9
ENST00000515098.5
ENST00000542098.2
3UTR-3UTR CCA 90 bp TCTCCCTTTCCTTATGCCATGGAGCCAGGTGCCAGGCGTGGGCTGGTCCATCTCCAGTGCTCCCCTCAGTaGAACTCCTCAGCCAGGCGC +
Preference number: 2 (lower is better)
Translates to: SPFPYAMEPGARRGLVHLQCSPQ*NSSARR
Trigger: GCGCCTGGCTGAGGAGTTCCACTGAGGGGAGCACTG...GAGATGGACCAGCCCACGCCTGGCACCTGGCTCCATGGCATAAGGAAAGGGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313386.9
ENST00000515098.5
ENST00000542098.2
3UTR-3UTR TCA 90 bp CCCGCGCGTCCCACACCGCATCTGACACAACACCACAGATCTCAGAGTCGAAGTGCTCCTCGGCCACGCTaGGCATGCCCTGCTGATACA +
Preference number: 2 (lower is better)
Translates to: PARPTPHLTQHHRSQSRSAPRPR*ACPADT
Trigger: TGTATCAGCAGGGCATGCTCAGCGTGGCCGAGGAGC...ACTTCGACTCTGAGATCTGTGGTGTTGTGTCAGATGCGGTGTGGGACGCGCGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512811.5
3UTR-3UTR CCA 90 bp TCCCGCGCGTCCCACACCGCATCTGACACAACACCACAGATCTCAGAGTCGAAGGAGAGAGGGGTCCCCTaGAGGGCCGGTTTCAAGGAG +
Preference number: 2 (lower is better)
Translates to: SRASHTASDTTPQISESKERGVP*RAGFKE
Trigger: CTCCTTGAAACCGGCCCTCCAGGGGACCCCTCTCTC...CTTCGACTCTGAGATCTGTGGTGTTGTGTCAGATGCGGTGTGGGACGCGCGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512663.5
3UTR CAA 90 bp GTTCTTCCTGCCTGGACACTGGATACCTGCTGGCCATGTTTTTGTTaGCGGCAGCCACCAGGCCGTGCCCAGTCCCTGTGTGTGGTAGAC +
Preference number: 2 (lower is better)
Translates to: VLPAWTLDTCWPCFC*RQPPGRAQSLCVVD
Trigger: GTCTACCACACACAGGGACTGGGCACGGCCTGGTGGCTGCCGCAAACAAAAACATGGCCAGCAGGTATCCAGTGTCCAGGCAGGAAGAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313386.9
ENST00000515098.5
3UTR-3UTR GCA 90 bp CCTTTCATAGTTGCCATGTGGGAATGTAGGCCCTGTGTGGCTGGACCATGCCTTTGCCATGGAGCCAGGTaGCAGGCGTGGGCTGGTCCA +
Preference number: 2 (lower is better)
Translates to: PFIVAMWECRPCVAGPCLCHGAR*QAWAGP
Trigger: TGGACCAGCCCACGCCTGGCACCTGGCTCCATGGCA...AAGGCATGGTCCAGCCACACAGGGCCTACATTCCCACATGGCAACTATGAAAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313386.9
ENST00000515098.5
3UTR CAA 90 bp CCGAGGGGCAAGGGTGGACATAGCATTGGCATGGCAGCAAGAGACTaGGCTGAGGGCAGGGGTGGAAGGATGTCTACTGCTGAAGACCAA +
Preference number: 2 (lower is better)
Translates to: PRGKGGHSIGMAARD*AEGRGGRMSTAEDQ
Trigger: TTGGTCTTCAGCAGTAGACATCCTTCCACCCCTGCCCTCAGCCAAGTCTCTTGCTGCCATGCCAATGCTATGTCCACCCTTGCCCCTCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000313386.9
ENST00000515098.5
ENST00000542098.2
3UTR CAA 90 bp TTGTGTTCTTCCTGCCTGGACACTGGATACCTGCTGGCCATGTTTTaGTTTGCGGCAGCCACCAGGCCGTGCCCAGTCCCTGTGTGTGGT +
Preference number: 2 (lower is better)
Translates to: LCSSCLDTGYLLAMF*FAAATRPCPVPVCG
Trigger: ACCACACACAGGGACTGGGCACGGCCTGGTGGCTGCCGCAAACAAAAACATGGCCAGCAGGTATCCAGTGTCCAGGCAGGAAGAACACAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313386.9
ENST00000515098.5
3UTR-3UTR TCA 90 bp GAGGTGGGCCACCGCTGGACACTCTTGGGCCGAGGGGCAAGGGTGGACATAGCAACCAAGGCTCACAGGTaGAAACCCCTTTCAACAAAA +
Preference number: 2 (lower is better)
Translates to: EVGHRWTLLGRGARVDIATKAHR*KPLSTK
Trigger: TTTTGTTGAAAGGGGTTTTCACCTGTGAGCCTTGGT...TGCTATGTCCACCCTTGCCCCTCGGCCCAAGAGTGTCCAGCGGTGGCCCACCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000313386.9
ENST00000515098.5
ENST00000542098.2
3UTR-3UTR TCA 90 bp AAGGACTCAGAGGGTTCTGTGCTGATGCTCAGCTGCCCAGGGCCGGGTGCTTTGGATGGTACATACTGTTaGGGCTGTAGTGGGAGGAAG +
Preference number: 2 (lower is better)
Translates to: KDSEGSVLMLSCPGPGALDGTYC*GCSGRK
Trigger: CTTCCTCCCACTACAGCCTCAACAGTATGTACCATC...CAAAGCACCCGGCCCTGGGCAGCTGAGCATCAGCACAGAACCCTCTGAGTCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313386.9
ENST00000515098.5
3UTR-3UTR GCA 90 bp AAGCTCCCCGCAGTCAGGGATGCAAGTTGTGTTCTTCCTGCCTGGACACTGGATGGCCATGTTTTTGTTTaGGGCAGCCACCAGGCCGTG +
Preference number: 2 (lower is better)
Translates to: KLPAVRDASCVLPAWTLDGHVFV*GSHQAV
Trigger: CACGGCCTGGTGGCTGCCGCAAACAAAAACATGGCC...ATCCAGTGTCCAGGCAGGAAGAACACAACTTGCATCCCTGACTGCGGGGAGCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313386.9
ENST00000515098.5
3UTR-3UTR GCA 90 bp GAAGGATGTCTACTGCTGAAGACCAAATCCCTTGCCACTCTGTCGGTTGCTACTCCTCTGCCAAAGGGCTaGTCCAGTGCTCCCCTCAGT +
Preference number: 2 (lower is better)
Translates to: EGCLLLKTKSLATLSVATPLPKG*SSAPLS
Trigger: ACTGAGGGGAGCACTGGAGCAGCCCTTTGGCAGAGG...AGTAGCAACCGACAGAGTGGCAAGGGATTTGGTCTTCAGCAGTAGACATCCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313386.9
ENST00000515098.5
ENST00000542098.2
3UTR-3UTR GCA 90 bp TCCCGCGCGTCCCACACCGCATCTGACACAACACCACAGATCTCAGAGTCGAAGCCACTCGGGATACACTaGTGTGAATGTCCTTATGGT +
Preference number: 2 (lower is better)
Translates to: SRASHTASDTTPQISESKPLGIH*CECPYG
Trigger: ACCATAAGGACATTCACAGCAGTGTATCCCGAGTGG...CTTCGACTCTGAGATCTGTGGTGTTGTGTCAGATGCGGTGTGGGACGCGCGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512663.5
3UTR-3UTR GCA 90 bp GGATGTCTACTGCTGAAGACCAAATCCCTTGCCACTCTGTCGGTTGCTACTAAGAAAGGGCTGCTCCAGTaGTCCCCTCAGTGGAACTCC +
Preference number: 2 (lower is better)
Translates to: GCLLLKTKSLATLSVATKKGLLQ*SPQWNS
Trigger: GGAGTTCCACTGAGGGGAGCACTGGAGCAGCCCTTT...CTTAGTAGCAACCGACAGAGTGGCAAGGGATTTGGTCTTCAGCAGTAGACATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313386.9
ENST00000515098.5
ENST00000542098.2
3UTR-3UTR CCA 90 bp CTGCTGATACAGGTGTTCCACGATGGCCATCTGCAGGATCTGCTGCTGCTGTTCCGAAGTTCCTGTCAATaGCTTTGCCCACTCGGGATA +
Preference number: 2 (lower is better)
Translates to: LLIQVFHDGHLQDLLLLFRSSCQ*LCPLGI
Trigger: TATCCCGAGTGGGCAAAGCCATTGACAGGAACTTCG...GAACAGCAGCAGCAGATCCTGCAGATGGCCATCGTGGAACACCTGTATCAGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512663.5
ENST00000512811.5
3UTR-3UTR GCA 90 bp CCAAATCCCTTGCCACTCTGTCGGTTGCTACTAAGTCAAACGCAAACAGAAACACCTCTGCCAAAGGGCTaGTCCAGTGCTCCCCTCAGT +
Preference number: 2 (lower is better)
Translates to: PNPLPLCRLLLSQTQTETPLPKG*SSAPLS
Trigger: ACTGAGGGGAGCACTGGAGCAGCCCTTTGGCAGAGG...TGTTTCTGTTTGCGTTTGACTTAGTAGCAACCGACAGAGTGGCAAGGGATTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313386.9
ENST00000515098.5
ENST00000542098.2
3UTR-3UTR CCA 90 bp CAAAGTTATAAAACAACGGCATTCCGTTCTAACTGGGACTATTTACAGTGGGAGGAGGTGGGCCACCGCTaGACACTCTTGGGCCGAGGG +
Preference number: 2 (lower is better)
Translates to: QSYKTTAFRSNWDYLQWEEVGHR*TLLGRG
Trigger: CCCTCGGCCCAAGAGTGTCCAGCGGTGGCCCACCTC...CTCCCACTGTAAATAGTCCCAGTTAGAACGGAATGCCGTTGTTTTATAACTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313386.9
ENST00000515098.5
ENST00000542098.2
3UTR CAA 90 bp TCGTGCAGGGCTTCCAGGATTCGATTCAACTCTAGGAAAGGCTGCTaGAAATCCAAGTCCACATTCAGCGTTGATTCCTGGCACAGCTCC +
Preference number: 2 (lower is better)
Translates to: SCRASRIRFNSRKGC*KSKSTFSVDSWHSS
Trigger: GGAGCTGTGCCAGGAATCAACGCTGAATGTGGACTTGGATTTCAAGCAGCCTTTCCTAGAGTTGAATCGAATCCTGGAAGCCCTGCACGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512811.5
3UTR-3UTR TCA 90 bp TGTTCGTGCAGGGCTTCCAGGATTCGATTCAACTCTAGGAAAGGCTGCTTGAAAGTCCACATTCAGCGTTaGTTCCTGGCACAGCTCCTC +
Preference number: 2 (lower is better)
Translates to: CSCRASRIRFNSRKGCLKVHIQR*FLAQLL
Trigger: GAGGAGCTGTGCCAGGAATCAACGCTGAATGTGGAC...TTTCAAGCAGCCTTTCCTAGAGTTGAATCGAATCCTGGAAGCCCTGCACGAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512811.5
3UTR-3UTR CCA 90 bp GACTATTTACAGTGGGAGATGGTACATACTGTTGAGGCTGTAGTGGGAGGAAGACCTTTCCTTATGCCATaGAGCCAGGTGCCAGGCGTG +
Preference number: 2 (lower is better)
Translates to: DYLQWEMVHTVEAVVGGRPFLMP*SQVPGV
Trigger: CACGCCTGGCACCTGGCTCCATGGCATAAGGAAAGG...TCTTCCTCCCACTACAGCCTCAACAGTATGTACCATCTCCCACTGTAAATAGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313386.9
ENST00000515098.5
ENST00000542098.2
3UTR-3UTR TCA 90 bp AGACCCACTTCATGGAAGCCTAAAGCCCCCACATCAGGAACACCCCCATTCCTAACCAAGGCTCACAGGTaGAAACCCCTTTCAACAAAA +
Preference number: 2 (lower is better)
Translates to: RPTSWKPKAPTSGTPPFLTKAHR*KPLSTK
Trigger: TTTTGTTGAAAGGGGTTTTCACCTGTGAGCCTTGGT...TAGGAATGGGGGTGTTCCTGATGTGGGGGCTTTAGGCTTCCATGAAGTGGGTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000313386.9
ENST00000515098.5
3UTR-3UTR CCA 90 bp CAAAGTTATAAAACAACGGCATTCCGTTCTAACTGGGACTATTTACAGTGGGAGCAGTGCTCCCCTCAGTaGAACTCCTCAGCCAGGCGC +
Preference number: 2 (lower is better)
Translates to: QSYKTTAFRSNWDYLQWEQCSPQ*NSSARR
Trigger: GCGCCTGGCTGAGGAGTTCCACTGAGGGGAGCACTG...CTCCCACTGTAAATAGTCCCAGTTAGAACGGAATGCCGTTGTTTTATAACTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000313386.9
ENST00000515098.5
ENST00000542098.2
3UTR-3UTR CCA 90 bp AGACCCACTTCATGGAAGCCTAAAGCCCCCACATCAGGAACACCCCCATTCCTAATTTACAGTGGGAGATaGTACATACTGTTGAGGCTG +
Preference number: 2 (lower is better)
Translates to: RPTSWKPKAPTSGTPPFLIYSGR*YILLRL
Trigger: CAGCCTCAACAGTATGTACCATCTCCCACTGTAAAT...TAGGAATGGGGGTGTTCCTGATGTGGGGGCTTTAGGCTTCCATGAAGTGGGTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000313386.9
ENST00000515098.5
3UTR-3UTR CCA 90 bp TGCAGGGCTTCCAGGATTCGATTCAACTCTAGGAAAGGCTGCTTGAAATCCAAGCGAAGTTCCTGTCAATaGCTTTGCCCACTCGGGATA +
Preference number: 2 (lower is better)
Translates to: CRASRIRFNSRKGCLKSKRSSCQ*LCPLGI
Trigger: TATCCCGAGTGGGCAAAGCCATTGACAGGAACTTCG...CTTGGATTTCAAGCAGCCTTTCCTAGAGTTGAATCGAATCCTGGAAGCCCTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512811.5
3UTR-3UTR TCA 90 bp GACTATTTACAGTGGGAGATGGTACATACTGTTGAGGCTGTAGTGGGAGGAAGAAAGGATGTCTACTGCTaGAGACCAAATCCCTTGCCA +
Preference number: 2 (lower is better)
Translates to: DYLQWEMVHTVEAVVGGRKDVYC*RPNPLP
Trigger: TGGCAAGGGATTTGGTCTTCAGCAGTAGACATCCTT...TCTTCCTCCCACTACAGCCTCAACAGTATGTACCATCTCCCACTGTAAATAGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313386.9
ENST00000515098.5
ENST00000542098.2
3UTR-3UTR TCA 90 bp CATTCCGTTCTAACTGGGACTATTTACAGTGGGAGATGGTACATACTGTTGAGGACCAAGGCTCACAGGTaGAAACCCCTTTCAACAAAA +
Preference number: 2 (lower is better)
Translates to: HSVLTGTIYSGRWYILLRTKAHR*KPLSTK
Trigger: TTTTGTTGAAAGGGGTTTTCACCTGTGAGCCTTGGT...CCTCAACAGTATGTACCATCTCCCACTGTAAATAGTCCCAGTTAGAACGGAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313386.9
ENST00000515098.5
ENST00000542098.2
3UTR-3UTR TCA 90 bp TTGTTCAAAGTTATAAAACAACGGCATTCCGTTCTAACTGGGACTATTTACAGTCTCAGCCAGGCGCTCTaGAACCAACCACAGTCCACT +
Preference number: 2 (lower is better)
Translates to: LFKVIKQRHSVLTGTIYSLSQAL*NQPQST
Trigger: AGTGGACTGTGGTTGGTTTCAGAGCGCCTGGCTGAG...ACTGTAAATAGTCCCAGTTAGAACGGAATGCCGTTGTTTTATAACTTTGAACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313386.9
ENST00000515098.5
ENST00000542098.2
3UTR-3UTR GCA 90 bp AACCAATTCAAGATGCTTTTAAATAGAACATGGACCGAACAGAACATGGTTGTGTTCTTAAGCAGCAGCTaGTGGTTGGGCCAGCGAGTT +
Preference number: 2 (lower is better)
Translates to: NQFKMLLNRTWTEQNMVVFLSSS*WLGQRV
Trigger: AACTCGCTGGCCCAACCAGCAGCTGCTGCTTAAGAA...CACAACCATGTTCTGTTCGGTCCATGTTCTATTTAAAAGCATCTTGAATTGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313386.9
ENST00000515098.5
3UTR GCA 72 bp AGCAGGAGCACAGAGGCCAGCATCTCCCTTTCCTTATaGCATGGAGCCAGGTGCCAGGCGTGGGCTGGTCCA +
Preference number: 3 (lower is better)
Translates to: SRSTEASISLSL*HGARCQAWAGP
Trigger: TGGACCAGCCCACGCCTGGCACCTGGCTCCATGGCATAAGGAAAGGGAGATGCTGGCCTCTGTGCTCCTGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313386.9
ENST00000515098.5
ENST00000542098.2
3UTR CCA 72 bp GAGCACAGAGGCCAGCATCTCCCTTTCCTTATGCCATaGAGCCAGGTGCCAGGCGTGGGCTGGTCCATCTCC +
Preference number: 3 (lower is better)
Translates to: EHRGQHLPFLMP*SQVPGVGWSIS
Trigger: GGAGATGGACCAGCCCACGCCTGGCACCTGGCTCCATGGCATAAGGAAAGGGAGATGCTGGCCTCTGTGCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313386.9
ENST00000515098.5
ENST00000542098.2
3UTR GCA 72 bp CCTGGACACTGGATACCTGCTGGCCATGTTTTTGTTTaGGGCAGCCACCAGGCCGTGCCCAGTCCCTGTGTG +
Preference number: 3 (lower is better)
Translates to: PGHWIPAGHVFV*GSHQAVPSPCV
Trigger: CACACAGGGACTGGGCACGGCCTGGTGGCTGCCGCAAACAAAAACATGGCCAGCAGGTATCCAGTGTCCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313386.9
ENST00000515098.5
3UTR GCA 72 bp AGGTGTTCCACGATGGCCATCTGCAGGATCTGCTGCTaGTGTTCCCGCGCGTCCCACACCGCATCTGACACA +
Preference number: 3 (lower is better)
Translates to: RCSTMAICRICC*CSRASHTASDT
Trigger: TGTGTCAGATGCGGTGTGGGACGCGCGGGAACAGCAGCAGCAGATCCTGCAGATGGCCATCGTGGAACACCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512663.5
ENST00000512811.5
3UTR-3UTR CAA 90 bp AAGGACTCAGAGGGTTCTGTGCTGATGCTCAGCTGCCCAGGGCCGGGTGCTTTGTGGCCATGTTTTTGTTaGCGGCAGCCACCAGGCCGT +
Preference number: 3 (lower is better)
Translates to: KDSEGSVLMLSCPGPGALWPCFC*RQPPGR
Trigger: ACGGCCTGGTGGCTGCCGCAAACAAAAACATGGCCA...CAAAGCACCCGGCCCTGGGCAGCTGAGCATCAGCACAGAACCCTCTGAGTCCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313386.9
ENST00000515098.5
3UTR GCA 72 bp CCAAAGGACTCAGAGGGTTCTGTGCTGATGCTCAGCTaGCCAGGGCCGGGTGCTTTGGCTCAAGCTGAGAAC +
Preference number: 3 (lower is better)
Translates to: PKDSEGSVLMLS*PGPGALAQAEN
Trigger: GTTCTCAGCTTGAGCCAAAGCACCCGGCCCTGGGCAGCTGAGCATCAGCACAGAACCCTCTGAGTCCTTTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313386.9
ENST00000515098.5
3UTR CCA 72 bp CCCCTGCTGGGCTGGAGCCCTTTCATAGTTGCCATGTaGGAATGTAGGCCCTGTGTGGCTGGACCATGCCTT +
Preference number: 3 (lower is better)
Translates to: PLLGWSPFIVAM*ECRPCVAGPCL
Trigger: AAGGCATGGTCCAGCCACACAGGGCCTACATTCCCACATGGCAACTATGAAAGGGCTCCAGCCCAGCAGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313386.9
ENST00000515098.5
3UTR TCA 72 bp GTGCTCCCCTCAGTGGAACTCCTCAGCCAGGCGCTCTaGAACCAACCACAGTCCACTGAAGTTGACCACCCT +
Preference number: 3 (lower is better)
Translates to: VLPSVELLSQAL*NQPQSTEVDHP
Trigger: AGGGTGGTCAACTTCAGTGGACTGTGGTTGGTTTCAGAGCGCCTGGCTGAGGAGTTCCACTGAGGGGAGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313386.9
ENST00000515098.5
ENST00000542098.2
3UTR TCA 72 bp CTGCTGCTGCTGTTCCCGCGCGTCCCACACCGCATCTaGCACAACACCACAGATCTCAGAGTCGAAGTTCCT +
Preference number: 3 (lower is better)
Translates to: LLLLFPRVPHRI*HNTTDLRVEVP
Trigger: AGGAACTTCGACTCTGAGATCTGTGGTGTTGTGTCAGATGCGGTGTGGGACGCGCGGGAACAGCAGCAGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512663.5
ENST00000512811.5
3UTR GCA 72 bp TGTGGTGAGTCTGTGGGTGTTTTCTTAAGCAGCAGCTaGTGGTTGGGCCAGCGAGTTGGTGGGCGGGAAGAG +
Preference number: 3 (lower is better)
Translates to: CGESVGVFLSSS*WLGQRVGGREE
Trigger: CTCTTCCCGCCCACCAACTCGCTGGCCCAACCAGCAGCTGCTGCTTAAGAAAACACCCACAGACTCACCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313386.9
ENST00000515098.5
3UTR-3UTR CAA 90 bp AGAGGGTTCTGTGCTGATGCTCAGCTGCCCAGGGCCGGGTGCTTTGGCTCAAGCTTGCCACTCTGTCGGTaGCTACTAAGTCAAACGCAA +
Preference number: 3 (lower is better)
Translates to: RGFCADAQLPRAGCFGSSLPLCR*LLSQTQ
Trigger: TTGCGTTTGACTTAGTAGCAACCGACAGAGTGGCAA...GCTTGAGCCAAAGCACCCGGCCCTGGGCAGCTGAGCATCAGCACAGAACCCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313386.9
ENST00000515098.5
3UTR TCA 72 bp TGCCCAGGGCCGGGTGCTTTGGCTCAAGCTGAGAACTaGTCCTGCTGCTATCCCAGCATTTTCAACTCCCTC +
Preference number: 3 (lower is better)
Translates to: CPGPGALAQAEN*SCCYPSIFNSL
Trigger: GAGGGAGTTGAAAATGCTGGGATAGCAGCAGGATCAGTTCTCAGCTTGAGCCAAAGCACCCGGCCCTGGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313386.9
ENST00000515098.5
3UTR TCA 72 bp GCTCAGCTGCCCAGGGCCGGGTGCTTTGGCTCAAGCTaGGAACTGATCCTGCTGCTATCCCAGCATTTTCAA +
Preference number: 3 (lower is better)
Translates to: AQLPRAGCFGSS*ELILLLSQHFQ
Trigger: TTGAAAATGCTGGGATAGCAGCAGGATCAGTTCTCAGCTTGAGCCAAAGCACCCGGCCCTGGGCAGCTGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313386.9
ENST00000515098.5
3UTR GCA 72 bp CTGGCCATGTTTTTGTTTGCGGCAGCCACCAGGCCGTaGCCAGTCCCTGTGTGTGGTAGACATGTGGTCATA +
Preference number: 3 (lower is better)
Translates to: LAMFLFAAATRP*PVPVCGRHVVI
Trigger: TATGACCACATGTCTACCACACACAGGGACTGGGCACGGCCTGGTGGCTGCCGCAAACAAAAACATGGCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313386.9
ENST00000515098.5
3UTR CCA 72 bp AGGGTGGACATAGCATTGGCATGGCAGCAAGAGACTTaGCTGAGGGCAGGGGTGGAAGGATGTCTACTGCTG +
Preference number: 3 (lower is better)
Translates to: RVDIALAWQQET*LRAGVEGCLLL
Trigger: CAGCAGTAGACATCCTTCCACCCCTGCCCTCAGCCAAGTCTCTTGCTGCCATGCCAATGCTATGTCCACCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313386.9
ENST00000515098.5
ENST00000542098.2
3UTR-3UTR CAA 90 bp GGCCGAGGGGCAAGGGTGGACATAGCATTGGCATGGCAGCAAGAGACTTGGCTGTTGCCACTCTGTCGGTaGCTACTAAGTCAAACGCAA +
Preference number: 3 (lower is better)
Translates to: GRGARVDIALAWQQETWLLPLCR*LLSQTQ
Trigger: TTGCGTTTGACTTAGTAGCAACCGACAGAGTGGCAA...CAGCCAAGTCTCTTGCTGCCATGCCAATGCTATGTCCACCCTTGCCCCTCGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313386.9
ENST00000515098.5
ENST00000542098.2
3UTR GCA 72 bp GCAAGTTGTGTTCTTCCTGCCTGGACACTGGATACCTaGTGGCCATGTTTTTGTTTGCGGCAGCCACCAGGC +
Preference number: 3 (lower is better)
Translates to: ASCVLPAWTLDT*WPCFCLRQPPG
Trigger: GCCTGGTGGCTGCCGCAAACAAAAACATGGCCAGCAGGTATCCAGTGTCCAGGCAGGAAGAACACAACTTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313386.9
ENST00000515098.5
3UTR GCA 72 bp GCTCCCCGCAGTCAGGGATGCAAGTTGTGTTCTTCCTaGCTGGACACTGGATACCTGCTGGCCATGTTTTTG +
Preference number: 3 (lower is better)
Translates to: APRSQGCKLCSS*LDTGYLLAMFL
Trigger: CAAAAACATGGCCAGCAGGTATCCAGTGTCCAGGCAGGAAGAACACAACTTGCATCCCTGACTGCGGGGAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313386.9
ENST00000515098.5
3UTR-3UTR CAA 90 bp CATTCCGTTCTAACTGGGACTATTTACAGTGGGAGATGGTACATACTGTTGAGGCACCGCTGGACACTCTaGGGCCGAGGGGCAAGGGTG +
Preference number: 3 (lower is better)
Translates to: HSVLTGTIYSGRWYILLRHRWTL*GRGARV
Trigger: CACCCTTGCCCCTCGGCCCAAGAGTGTCCAGCGGTG...CCTCAACAGTATGTACCATCTCCCACTGTAAATAGTCCCAGTTAGAACGGAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313386.9
ENST00000515098.5
ENST00000542098.2
3UTR GCA 72 bp TTTAGACTTGGGGCCCCTTCCTGCTGTCAGAGGCCCTaGACAGGACTCAGTATACATAACAGCCAAGTTCAG +
Preference number: 3 (lower is better)
Translates to: FRLGAPSCCQRP*TGLSIHNSQVQ
Trigger: CTGAACTTGGCTGTTATGTATACTGAGTCCTGTGCAGGGCCTCTGACAGCAGGAAGGGGCCCCAAGTCTAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313386.9
ENST00000515098.5
3UTR CCA 72 bp TCAGGGATGCAAGTTGTGTTCTTCCTGCCTGGACACTaGATACCTGCTGGCCATGTTTTTGTTTGCGGCAGC +
Preference number: 3 (lower is better)
Translates to: SGMQVVFFLPGH*IPAGHVFVCGS
Trigger: GCTGCCGCAAACAAAAACATGGCCAGCAGGTATCCAGTGTCCAGGCAGGAAGAACACAACTTGCATCCCTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313386.9
ENST00000515098.5
3UTR-3UTR CAA 90 bp GGATGTCTACTGCTGAAGACCAAATCCCTTGCCACTCTGTCGGTTGCTACTAAGCACAGTCCACTGAAGTaGACCACCCTACCGAGACAG +
Preference number: 3 (lower is better)
Translates to: GCLLLKTKSLATLSVATKHSPLK*TTLPRQ
Trigger: CTGTCTCGGTAGGGTGGTCAACTTCAGTGGACTGTG...CTTAGTAGCAACCGACAGAGTGGCAAGGGATTTGGTCTTCAGCAGTAGACATCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313386.9
ENST00000515098.5
ENST00000542098.2
3UTR TCA 72 bp CCTTATGGTCCGAAGCCAGTTTCTGCACCGTATCTTTaGTCTTCCGGCAGCACTGTGACATCACCAGAGAGA +
Preference number: 3 (lower is better)
Translates to: PYGPKPVSAPYL*SSGSTVTSPER
Trigger: TCTCTCTGGTGATGTCACAGTGCTGCCGGAAGATCAAAGATACGGTGCAGAAACTGGCTTCGGACCATAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512663.5
3UTR-3UTR CAA 90 bp TCTAACTGGGACTATTTACAGTGGGAGATGGTACATACTGTTGAGGCTGTAGTGCACAGTCCACTGAAGTaGACCACCCTACCGAGACAG +
Preference number: 3 (lower is better)
Translates to: SNWDYLQWEMVHTVEAVVHSPLK*TTLPRQ
Trigger: CTGTCTCGGTAGGGTGGTCAACTTCAGTGGACTGTG...CACTACAGCCTCAACAGTATGTACCATCTCCCACTGTAAATAGTCCCAGTTAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313386.9
ENST00000515098.5
ENST00000542098.2
3UTR TCA 72 bp CAGGCACCCTGGAATAAACTGGAAATAGCTTGGGCTTaGGGGTCAGATCTGGTTAAAACTCCAAGCTCTCTC +
Preference number: 3 (lower is better)
Translates to: QAPWNKLEIAWA*GSDLVKTPSSL
Trigger: GAGAGAGCTTGGAGTTTTAACCAGATCTGACCCTCAAGCCCAAGCTATTTCCAGTTTATTCCAGGGTGCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313386.9
ENST00000515098.5
3UTR GCA 72 bp AGGGCTTCCAGGATTCGATTCAACTCTAGGAAAGGCTaGTTGAAATCCAAGTCCACATTCAGCGTTGATTCC +
Preference number: 3 (lower is better)
Translates to: RASRIRFNSRKG*LKSKSTFSVDS
Trigger: GGAATCAACGCTGAATGTGGACTTGGATTTCAAGCAGCCTTTCCTAGAGTTGAATCGAATCCTGGAAGCCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512811.5
3UTR-3UTR CAA 90 bp TTGTTCAAAGTTATAAAACAACGGCATTCCGTTCTAACTGGGACTATTTACAGTCACAGTCCACTGAAGTaGACCACCCTACCGAGACAG +
Preference number: 3 (lower is better)
Translates to: LFKVIKQRHSVLTGTIYSHSPLK*TTLPRQ
Trigger: CTGTCTCGGTAGGGTGGTCAACTTCAGTGGACTGTG...ACTGTAAATAGTCCCAGTTAGAACGGAATGCCGTTGTTTTATAACTTTGAACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313386.9
ENST00000515098.5
ENST00000542098.2
3UTR CCA 72 bp GATGGCAACCAATTCAAGATGCTTTTAAATAGAACATaGACCGAACAGAACATGGTTGTGGGCCAGATTAGG +
Preference number: 3 (lower is better)
Translates to: DGNQFKMLLNRT*TEQNMVVGQIR
Trigger: CCTAATCTGGCCCACAACCATGTTCTGTTCGGTCCATGTTCTATTTAAAAGCATCTTGAATTGGTTGCCATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313386.9
ENST00000515098.5
3UTR CCA 72 bp GTTCAAAGTTATAAAACAACGGCATTCCGTTCTAACTaGGACTATTTACAGTGGGAGATGGTACATACTGTT +
Preference number: 3 (lower is better)
Translates to: VQSYKTTAFRSN*DYLQWEMVHTV
Trigger: AACAGTATGTACCATCTCCCACTGTAAATAGTCCCAGTTAGAACGGAATGCCGTTGTTTTATAACTTTGAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313386.9
ENST00000515098.5
ENST00000542098.2
CDS-3UTR GCA 90 bp GTAGTGGGAGGAAGAGGTGGGCCACCGCTGGACACTCTTGGGCCGAGGGGCAAGGGTCCCCTGGAGGGCTaGGCTGGCCAGCTCAGCCCG +
Preference number: 4 (lower is better)
Translates to: VVGGRGGPPLDTLGPRGKGPLEG*AGQLSP
Trigger: CGGGCTGAGCTGGCCAGCGCAGCCCTCCAGGGGACC...CTTGCCCCTCGGCCCAAGAGTGTCCAGCGGTGGCCCACCTCTTCCTCCCACTAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313386.9
ENST00000515098.5
CDS-3UTR CCA 90 bp GTAGTGGGAGGAAGAGGTGGGCCACCGCTGGACACTCTTGGGCCGAGGGGCAAGGAGGTGGGCCACCGCTaGACACTCTTGGGCCGAGGG +
Preference number: 4 (lower is better)
Translates to: VVGGRGGPPLDTLGPRGKEVGHR*TLLGRG
Trigger: CCCTCGGCCCAAGAGTGTCCAGCGGTGGCCCACCTC...CTTGCCCCTCGGCCCAAGAGTGTCCAGCGGTGGCCCACCTCTTCCTCCCACTAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313386.9
ENST00000515098.5
ENST00000542098.2
CDS-3UTR TCA 90 bp GAGGAAGAGGTGGGCCACCGCTGGACACTCTTGGGCCGAGGGGCAAGGGTGGACCAGGTGGCAGTAGGGTaGCTTCTCCAAGCCCAGCCG +
Preference number: 4 (lower is better)
Translates to: EEEVGHRWTLLGRGARVDQVAVG*LLQAQP
Trigger: CGGCTGGGCTTGGAGAAGTCACCCTACTGCCACCTG...GTCCACCCTTGCCCCTCGGCCCAAGAGTGTCCAGCGGTGGCCCACCTCTTCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313386.9
ENST00000515098.5
ENST00000542098.2
CDS-3UTR GCA 90 bp AGCCTCTGCCAAAGGGCTGCTCCAGTGCTCCCCTCAGTGGAACTCCTCAGCCAGCTGAGGGCCTCCAGCTaGTTCGCGGGGCCTCCTGCC +
Preference number: 4 (lower is better)
Translates to: SLCQRAAPVLPSVELLSQLRASS*FAGPPA
Trigger: GGCAGGAGGCCCCGCGAAGCAGCTGGAGGCCCTCAG...CTGGCTGAGGAGTTCCACTGAGGGGAGCACTGGAGCAGCCCTTTGGCAGAGGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000313386.9
ENST00000515098.5
ENST00000542098.2
CDS-3UTR CCA 90 bp GTAGTGGGAGGAAGAGGTGGGCCACCGCTGGACACTCTTGGGCCGAGGGGCAAGCGGCTCTTCGGGGGCTaGGCCGGGACCTATGAGTCT +
Preference number: 4 (lower is better)
Translates to: VVGGRGGPPLDTLGPRGKRLFGG*AGTYES
Trigger: AGACTCATAGGTCCCGGCCCAGCCCCCGAAGAGCCG...CTTGCCCCTCGGCCCAAGAGTGTCCAGCGGTGGCCCACCTCTTCCTCCCACTAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313386.9
ENST00000515098.5
CDS-3UTR TCA 90 bp CTCTGCCAAAGGGCTGCTCCAGTGCTCCCCTCAGTGGAACTCCTCAGCCAGGCGCTGGGCCGGGACCTATaGGTCTGGGACTCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: LCQRAAPVLPSVELLSQALGRDL*VWDSSS
Trigger: GGAGCTGGAGTCCCAGACTCATAGGTCCCGGCCCAG...CGCCTGGCTGAGGAGTTCCACTGAGGGGAGCACTGGAGCAGCCCTTTGGCAGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313386.9
ENST00000515098.5
CDS-3UTR TCA 90 bp GAGGTGGGCCACCGCTGGACACTCTTGGGCCGAGGGGCAAGGGTGGACATAGCAACCTTGCCCGGGGTCTaGCATCTAAGCTCCCCGCAG +
Preference number: 4 (lower is better)
Translates to: EVGHRWTLLGRGARVDIATLPGV*HLSSPQ
Trigger: CTGCGGGGAGCTTAGATGTCAGACCCCGGGCAAGGT...TGCTATGTCCACCCTTGCCCCTCGGCCCAAGAGTGTCCAGCGGTGGCCCACCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000313386.9
ENST00000515098.5
CDS-3UTR TCA 90 bp GAGGAAGAGGTGGGCCACCGCTGGACACTCTTGGGCCGAGGGGCAAGGGTGGACGGTGGGCGGGAAGAGTaGAGCAGTCTTCCTCAGCAG +
Preference number: 4 (lower is better)
Translates to: EEEVGHRWTLLGRGARVDGGREE*SSLPQQ
Trigger: CTGCTGAGGAAGACTGCTTCACTCTTCCCGCCCACC...GTCCACCCTTGCCCCTCGGCCCAAGAGTGTCCAGCGGTGGCCCACCTCTTCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313386.9
ENST00000515098.5
CDS-3UTR GCA 90 bp TGCCAAAGGGCTGCTCCAGTGCTCCCCTCAGTGGAACTCCTCAGCCAGGCGCTCTGCCATGGAGCCAGGTaGCAGGCGTGGGCTGGTCCA +
Preference number: 4 (lower is better)
Translates to: CQRAAPVLPSVELLSQALCHGAR*QAWAGP
Trigger: TGGACCAGCCCACGCCTGGCACCTGGCTCCATGGCA...GAGCGCCTGGCTGAGGAGTTCCACTGAGGGGAGCACTGGAGCAGCCCTTTGGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313386.9
ENST00000515098.5
ENST00000542098.2
CDS-3UTR CCA 90 bp AGAGGGGTCCCCTGGAGGGCCGGTTTCAAGGAGGCCTACAGATGCAGGTACCAAGCCACCCACCTGCGCTaGCCAGCTCAGCCCGCAGCT +
Preference number: 4 (lower is better)
Translates to: RGVPWRAGFKEAYRCRYQATHLR*PAQPAA
Trigger: AGCTGCGGGCTGAGCTGGCCAGCGCAGGTGGGTGGC...TTGGTACCTGCATCTGTAGGCCTCCTTGAAACCGGCCCTCCAGGGGACCCCTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512663.5
CDS-3UTR TCA 90 bp GCCAAAGGGCTGCTCCAGTGCTCCCCTCAGTGGAACTCCTCAGCCAGGCGCTCTAGTGCCGAGCATAGCTaGGGGCCTCCAGCTGCTTCG +
Preference number: 4 (lower is better)
Translates to: AKGLLQCSPQWNSSARRSSAEHS*GPPAAS
Trigger: CGAAGCAGCTGGAGGCCCTCAGCTATGCTCGGCACT...AGAGCGCCTGGCTGAGGAGTTCCACTGAGGGGAGCACTGGAGCAGCCCTTTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000313386.9
ENST00000515098.5
ENST00000542098.2
CDS-3UTR TCA 90 bp GAGGTGGGCCACCGCTGGACACTCTTGGGCCGAGGGGCAAGGGTGGACATAGCAGGGAGGGTTGGAATCTaGCGTCTGCTGGCGGAGGAT +
Preference number: 4 (lower is better)
Translates to: EVGHRWTLLGRGARVDIAGRVGI*RLLAED
Trigger: ATCCTCCGCCAGCAGACGTCAGATTCCAACCCTCCC...TGCTATGTCCACCCTTGCCCCTCGGCCCAAGAGTGTCCAGCGGTGGCCCACCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313386.9
ENST00000515098.5
ENST00000542098.2
CDS-3UTR GCA 90 bp GCCAAAGGGCTGCTCCAGTGCTCCCCTCAGTGGAACTCCTCAGCCAGGCGCTCTTGCAGGATCTGCTGCTaGTGTTCCCGCGCGTCCCAC +
Preference number: 4 (lower is better)
Translates to: AKGLLQCSPQWNSSARRSCRICC*CSRASH
Trigger: GTGGGACGCGCGGGAACAGCAGCAGCAGATCCTGCA...AGAGCGCCTGGCTGAGGAGTTCCACTGAGGGGAGCACTGGAGCAGCCCTTTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313386.9
ENST00000515098.5
ENST00000542098.2
CDS-3UTR GCA 90 bp GCCAAAGGGCTGCTCCAGTGCTCCCCTCAGTGGAACTCCTCAGCCAGGCGCTCTCTTCGCGGGGCCTCCTaGCAAGAGGCGGATGAAGTG +
Preference number: 4 (lower is better)
Translates to: AKGLLQCSPQWNSSARRSLRGAS*QEADEV
Trigger: CACTTCATCCGCCTCTTGGCAGGAGGCCCCGCGAAG...AGAGCGCCTGGCTGAGGAGTTCCACTGAGGGGAGCACTGGAGCAGCCCTTTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000313386.9
ENST00000515098.5
ENST00000542098.2
CDS-3UTR GCA 90 bp TGCCAAAGGGCTGCTCCAGTGCTCCCCTCAGTGGAACTCCTCAGCCAGGCGCTCTGGATCTCCCGCTGGTaGAGCCGAGCAAAGGGCTGG +
Preference number: 4 (lower is better)
Translates to: CQRAAPVLPSVELLSQALWISRW*SRAKGW
Trigger: CCAGCCCTTTGCTCGGCTGCACCAGCGGGAGATCCA...GAGCGCCTGGCTGAGGAGTTCCACTGAGGGGAGCACTGGAGCAGCCCTTTGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313386.9
ENST00000515098.5
ENST00000542098.2
CDS-3UTR CCA 90 bp CTCTTGGGCCGAGGGGCAAGGGTGGACATAGCATTGGCATGGCAGCAAGAGACTGAGAGAGGGGTCCCCTaGAGGGCTGCGCTGGCCAGC +
Preference number: 4 (lower is better)
Translates to: LLGRGARVDIALAWQQETERGVP*RAALAS
Trigger: GCTGGCCAGCGCAGCCCTCCAGGGGACCCCTCTCTC...AGTCTCTTGCTGCCATGCCAATGCTATGTCCACCCTTGCCCCTCGGCCCAAGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000313386.9
ENST00000515098.5
CDS-3UTR CCA 90 bp GAGGAAGAGGTGGGCCACCGCTGGACACTCTTGGGCCGAGGGGCAAGGGTGGACTTCAGCGTTGATTCCTaGCACAGCTCCTCGGCCACG +
Preference number: 4 (lower is better)
Translates to: EEEVGHRWTLLGRGARVDFSVDS*HSSSAT
Trigger: CGTGGCCGAGGAGCTGTGCCAGGAATCAACGCTGAA...GTCCACCCTTGCCCCTCGGCCCAAGAGTGTCCAGCGGTGGCCCACCTCTTCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313386.9
ENST00000515098.5
ENST00000542098.2
CDS-3UTR CCA 90 bp CTCTGCCAAAGGGCTGCTCCAGTGCTCCCCTCAGTGGAACTCCTCAGCCAGGCGAGCAGGCGCTGCCTGTaGGAGACGGCCCATTCCAAC +
Preference number: 4 (lower is better)
Translates to: LCQRAAPVLPSVELLSQASRRCL*ETAHSN
Trigger: GTTGGAATGGGCCGTCTCCCACAGGCAGCGCCTGCT...CGCCTGGCTGAGGAGTTCCACTGAGGGGAGCACTGGAGCAGCCCTTTGGCAGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313386.9
ENST00000515098.5
ENST00000542098.2
CDS-3UTR CCA 90 bp GGCCGAGGGGCAAGGGTGGACATAGCATTGGCATGGCAGCAAGAGACTTGGCTGGAGGTGGGCCACCGCTaGACACTCTTGGGCCGAGGG +
Preference number: 4 (lower is better)
Translates to: GRGARVDIALAWQQETWLEVGHR*TLLGRG
Trigger: CCCTCGGCCCAAGAGTGTCCAGCGGTGGCCCACCTC...CAGCCAAGTCTCTTGCTGCCATGCCAATGCTATGTCCACCCTTGCCCCTCGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313386.9
ENST00000515098.5
ENST00000542098.2
CDS-3UTR CCA 90 bp TCTCCCTTTCCTTATGCCATGGAGCCAGGTGCCAGGCGTGGGCTGGTCCATCTCGAGGTGGGCCACCGCTaGACACTCTTGGGCCGAGGG +
Preference number: 4 (lower is better)
Translates to: SPFPYAMEPGARRGLVHLEVGHR*TLLGRG
Trigger: CCCTCGGCCCAAGAGTGTCCAGCGGTGGCCCACCTC...GAGATGGACCAGCCCACGCCTGGCACCTGGCTCCATGGCATAAGGAAAGGGAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313386.9
ENST00000515098.5
ENST00000542098.2
CDS-3UTR TCA 90 bp AGCCTCTGCCAAAGGGCTGCTCCAGTGCTCCCCTCAGTGGAACTCCTCAGCCAGACCTTGCCCGGGGTCTaGCATCTAAGCTCCCCGCAG +
Preference number: 4 (lower is better)
Translates to: SLCQRAAPVLPSVELLSQTLPGV*HLSSPQ
Trigger: CTGCGGGGAGCTTAGATGTCAGACCCCGGGCAAGGT...CTGGCTGAGGAGTTCCACTGAGGGGAGCACTGGAGCAGCCCTTTGGCAGAGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000313386.9
ENST00000515098.5
CDS-3UTR GCA 90 bp TGCCAAAGGGCTGCTCCAGTGCTCCCCTCAGTGGAACTCCTCAGCCAGGCGCTCATCTGCAGGATCTGCTaGTGCTGTTCCCGCGCGTCC +
Preference number: 4 (lower is better)
Translates to: CQRAAPVLPSVELLSQALICRIC*CCSRAS
Trigger: GGACGCGCGGGAACAGCAGCAGCAGATCCTGCAGAT...GAGCGCCTGGCTGAGGAGTTCCACTGAGGGGAGCACTGGAGCAGCCCTTTGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313386.9
ENST00000515098.5
ENST00000542098.2
CDS-3UTR GCA 90 bp TCTCCCTTTCCTTATGCCATGGAGCCAGGTGCCAGGCGTGGGCTGGTCCATCTCGCAGCCACCAGGCCGTaGCCAGTCCCTGTGTGTGGT +
Preference number: 4 (lower is better)
Translates to: SPFPYAMEPGARRGLVHLAATRP*PVPVCG
Trigger: ACCACACACAGGGACTGGGCACGGCCTGGTGGCTGC...GAGATGGACCAGCCCACGCCTGGCACCTGGCTCCATGGCATAAGGAAAGGGAGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313386.9
ENST00000515098.5
CDS-3UTR CCA 90 bp GGCTGCTCCAGTGCTCCCCTCAGTGGAACTCCTCAGCCAGGCGCTCTGAAACCAACCTGGATCTCCCGCTaGTGCAGCCGAGCAAAGGGC +
Preference number: 4 (lower is better)
Translates to: GCSSAPLSGTPQPGALKPTWISR*CSRAKG
Trigger: GCCCTTTGCTCGGCTGCACCAGCGGGAGATCCAGGT...TGGTTTCAGAGCGCCTGGCTGAGGAGTTCCACTGAGGGGAGCACTGGAGCAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313386.9
ENST00000515098.5
ENST00000542098.2
CDS-3UTR CCA 90 bp GGCCGAGGGGCAAGGGTGGACATAGCATTGGCATGGCAGCAAGAGACTTGGCTGCTGAGGCACAGGAAGTaGGGGTGGCAGGGACCGGGA +
Preference number: 4 (lower is better)
Translates to: GRGARVDIALAWQQETWLLRHRK*GWQGPG
Trigger: TCCCGGTCCCTGCCACCCCCACTTCCTGTGCCTCAG...CAGCCAAGTCTCTTGCTGCCATGCCAATGCTATGTCCACCCTTGCCCCTCGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313386.9
ENST00000515098.5
CDS-3UTR CCA 90 bp GCGCGTCCCACACCGCATCTGACACAACACCACAGATCTCAGAGTCGAAGTTCCCCGGCAGCACTGCGCTaGCCAGCTCAGCCCGCAGCT +
Preference number: 4 (lower is better)
Translates to: ARPTPHLTQHHRSQSRSSPAALR*PAQPAA
Trigger: AGCTGCGGGCTGAGCTGGCCAGCGCAGTGCTGCCGG...GGAACTTCGACTCTGAGATCTGTGGTGTTGTGTCAGATGCGGTGTGGGACGCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512811.5
CDS-3UTR TCA 90 bp GTAGTGGGAGGAAGAGGTGGGCCACCGCTGGACACTCTTGGGCCGAGGGGCAAGGTCCACATTCAGCGTTaGTTCCTGGCACAGCTCCTC +
Preference number: 4 (lower is better)
Translates to: VVGGRGGPPLDTLGPRGKVHIQR*FLAQLL
Trigger: GAGGAGCTGTGCCAGGAATCAACGCTGAATGTGGAC...CTTGCCCCTCGGCCCAAGAGTGTCCAGCGGTGGCCCACCTCTTCCTCCCACTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313386.9
ENST00000515098.5
ENST00000542098.2
CDS-3UTR TCA 90 bp GGCCGAGGGGCAAGGGTGGACATAGCATTGGCATGGCAGCAAGAGACTTGGCTGAGTGCCGAGCATAGCTaGGGGCCTCCAGCTGCTTCG +
Preference number: 4 (lower is better)
Translates to: GRGARVDIALAWQQETWLSAEHS*GPPAAS
Trigger: CGAAGCAGCTGGAGGCCCTCAGCTATGCTCGGCACT...CAGCCAAGTCTCTTGCTGCCATGCCAATGCTATGTCCACCCTTGCCCCTCGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000313386.9
ENST00000515098.5
ENST00000542098.2
CDS-3UTR GCA 90 bp TCTGCTGCTGCTGTTCCCGCGCGTCCCACACCGCATCTGACACAACACCACAGAATGGTGGCCTCAGCCTaGTCACTTCCGACCCAGCGC +
Preference number: 4 (lower is better)
Translates to: SAAAVPARPTPHLTQHHRMVASA*SLPTQR
Trigger: GCGCTGGGTCGGAAGTGAGCAGGCTGAGGCCACCAT...TCTGTGGTGTTGTGTCAGATGCGGTGTGGGACGCGCGGGAACAGCAGCAGCAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512663.5
CDS-3UTR GCA 90 bp AGAGGGGTCCCCTGGAGGGCCGGTTTCAAGGAGGCCTACAGATGCAGGTACCAATGCAGGATCTGCTGCTaGTGTTCCCGCGCGTCCCAC +
Preference number: 4 (lower is better)
Translates to: RGVPWRAGFKEAYRCRYQCRICC*CSRASH
Trigger: GTGGGACGCGCGGGAACAGCAGCAGCAGATCCTGCA...TTGGTACCTGCATCTGTAGGCCTCCTTGAAACCGGCCCTCCAGGGGACCCCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512663.5
CDS-3UTR GCA 90 bp AGAGGGGTCCCCTGGAGGGCCGGTTTCAAGGAGGCCTACAGATGCAGGTACCAAGCCATCTGCAGGATCTaGTGCTGCTGTTCCCGCGCG +
Preference number: 4 (lower is better)
Translates to: RGVPWRAGFKEAYRCRYQAICRI*CCCSRA
Trigger: CGCGCGGGAACAGCAGCAGCAGATCCTGCAGATGGC...TTGGTACCTGCATCTGTAGGCCTCCTTGAAACCGGCCCTCCAGGGGACCCCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512663.5
CDS-3UTR GCA 90 bp TCTCCCTTTCCTTATGCCATGGAGCCAGGTGCCAGGCGTGGGCTGGTCCATCTCGCCATCTGCAGGATCTaGTGCTGCTGTTCCCGCGCG +
Preference number: 4 (lower is better)
Translates to: SPFPYAMEPGARRGLVHLAICRI*CCCSRA
Trigger: CGCGCGGGAACAGCAGCAGCAGATCCTGCAGATGGC...GAGATGGACCAGCCCACGCCTGGCACCTGGCTCCATGGCATAAGGAAAGGGAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313386.9
ENST00000515098.5
ENST00000542098.2
CDS-3UTR GCA 90 bp CACTGGATACCTGCTGGCCATGTTTTTGTTTGCGGCAGCCACCAGGCCGTGCCCCTTCGCGGGGCCTCCTaGCAAGAGGCGGATGAAGTG +
Preference number: 4 (lower is better)
Translates to: HWIPAGHVFVCGSHQAVPLRGAS*QEADEV
Trigger: CACTTCATCCGCCTCTTGGCAGGAGGCCCCGCGAAG...GGGCACGGCCTGGTGGCTGCCGCAAACAAAAACATGGCCAGCAGGTATCCAGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000313386.9
ENST00000515098.5
CDS-3UTR GCA 90 bp GCCAAAGGGCTGCTCCAGTGCTCCCCTCAGTGGAACTCCTCAGCCAGGCGCTCTGGTCTCACAGATCTCTaGCCAGTGGCTGCTGTCCAG +
Preference number: 4 (lower is better)
Translates to: AKGLLQCSPQWNSSARRSGLTDL*PVAAVQ
Trigger: CTGGACAGCAGCCACTGGGCAGAGATCTGTGAGACC...AGAGCGCCTGGCTGAGGAGTTCCACTGAGGGGAGCACTGGAGCAGCCCTTTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313386.9
ENST00000515098.5
ENST00000542098.2
CDS-3UTR GCA 90 bp CTCTGCCAAAGGGCTGCTCCAGTGCTCCCCTCAGTGGAACTCCTCAGCCAGGCGGGTCTCACAGATCTCTaGCCAGTGGCTGCTGTCCAG +
Preference number: 4 (lower is better)
Translates to: LCQRAAPVLPSVELLSQAGLTDL*PVAAVQ
Trigger: CTGGACAGCAGCCACTGGGCAGAGATCTGTGAGACC...CGCCTGGCTGAGGAGTTCCACTGAGGGGAGCACTGGAGCAGCCCTTTGGCAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313386.9
ENST00000515098.5
ENST00000542098.2
CDS-3UTR GCA 90 bp AGAGGGTTCTGTGCTGATGCTCAGCTGCCCAGGGCCGGGTGCTTTGGCTCAAGCCAGACCCCAGTGCACTaGCGCTGCTCAATCACAGCC +
Preference number: 4 (lower is better)
Translates to: RGFCADAQLPRAGCFGSSQTPVH*RCSITA
Trigger: GGCTGTGATTGAGCAGCGGCAGTGCACTGGGGTCTG...GCTTGAGCCAAAGCACCCGGCCCTGGGCAGCTGAGCATCAGCACAGAACCCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313386.9
ENST00000515098.5
CDS-3UTR GCA 90 bp CTCTGCCAAAGGGCTGCTCCAGTGCTCCCCTCAGTGGAACTCCTCAGCCAGGCGGATGCGTTTCCCATCTaGCGGGTTCTGCTCCATGGG +
Preference number: 4 (lower is better)
Translates to: LCQRAAPVLPSVELLSQADAFPI*RVLLHG
Trigger: CCCATGGAGCAGAACCCGGCAGATGGGAAACGCATC...CGCCTGGCTGAGGAGTTCCACTGAGGGGAGCACTGGAGCAGCCCTTTGGCAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313386.9
ENST00000515098.5
ENST00000542098.2
CDS-3UTR GCA 90 bp AAGGACTCAGAGGGTTCTGTGCTGATGCTCAGCTGCCCAGGGCCGGGTGCTTTGCTTGGGGCCCCTTCCTaGTGTCAGAGGCCCTGCACA +
Preference number: 4 (lower is better)
Translates to: KDSEGSVLMLSCPGPGALLGAPS*CQRPCT
Trigger: TGTGCAGGGCCTCTGACAGCAGGAAGGGGCCCCAAG...CAAAGCACCCGGCCCTGGGCAGCTGAGCATCAGCACAGAACCCTCTGAGTCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313386.9
ENST00000515098.5
CDS-3UTR CCA 90 bp CAGTGGAACTCCTCAGCCAGGCGCTCTGAAACCAACCACAGTCCACTGAAGTTGCCTGGAGGGCTGCGCTaGCCAGCTCAGCCCGCAGCT +
Preference number: 4 (lower is better)
Translates to: QWNSSARRSETNHSPLKLPGGLR*PAQPAA
Trigger: AGCTGCGGGCTGAGCTGGCCAGCGCAGCCCTCCAGG...CAACTTCAGTGGACTGTGGTTGGTTTCAGAGCGCCTGGCTGAGGAGTTCCACTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313386.9
ENST00000515098.5
CDS-3UTR CCA 90 bp TCCTCAGCCAGGCGCTCTGAAACCAACCACAGTCCACTGAAGTTGACCACCCTACCTGGAGGGCTGCGCTaGCCAGCTCAGCCCGCAGCT +
Preference number: 4 (lower is better)
Translates to: SSARRSETNHSPLKLTTLPGGLR*PAQPAA
Trigger: AGCTGCGGGCTGAGCTGGCCAGCGCAGCCCTCCAGG...TAGGGTGGTCAACTTCAGTGGACTGTGGTTGGTTTCAGAGCGCCTGGCTGAGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313386.9
ENST00000515098.5
CDS-3UTR CCA 90 bp CTTGGGCCGAGGGGCAAGGGTGGACATAGCATTGGCATGGCAGCAAGAGACTTGCCCCTCTGTAGGACCTaGGTGCAGCCGCAGGCTCCA +
Preference number: 4 (lower is better)
Translates to: LGPRGKGGHSIGMAARDLPLCRT*VQPQAP
Trigger: TGGAGCCTGCGGCTGCACCCAGGTCCTACAGAGGGG...CAAGTCTCTTGCTGCCATGCCAATGCTATGTCCACCCTTGCCCCTCGGCCCAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313386.9
ENST00000515098.5
CDS-3UTR CCA 90 bp TGCTCCCCTCAGTGGAACTCCTCAGCCAGGCGCTCTGAAACCAACCACAGTCCACTGAGGCACAGGAAGTaGGGGTGGCAGGGACCGGGA +
Preference number: 4 (lower is better)
Translates to: CSPQWNSSARRSETNHSPLRHRK*GWQGPG
Trigger: TCCCGGTCCCTGCCACCCCCACTTCCTGTGCCTCAG...TGGACTGTGGTTGGTTTCAGAGCGCCTGGCTGAGGAGTTCCACTGAGGGGAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313386.9
ENST00000515098.5
CDS-3UTR CCA 90 bp GCGCGTCCCACACCGCATCTGACACAACACCACAGATCTCAGAGTCGAAGTTCCGGGCACTTGCAAGGGTaGCCACCCACCTGCGCTGGC +
Preference number: 4 (lower is better)
Translates to: ARPTPHLTQHHRSQSRSSGHLQG*PPTCAG
Trigger: GCCAGCGCAGGTGGGTGGCCACCCTTGCAAGTGCCC...GGAACTTCGACTCTGAGATCTGTGGTGTTGTGTCAGATGCGGTGTGGGACGCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512663.5
CDS-3UTR TCA 90 bp CGCGCGTCCCACACCGCATCTGACACAACACCACAGATCTCAGAGTCGAAGTTCCTGGGCCGGGACCTATaGGTCTGGGACTCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: RASHTASDTTPQISESKFLGRDL*VWDSSS
Trigger: GGAGCTGGAGTCCCAGACTCATAGGTCCCGGCCCAG...GAACTTCGACTCTGAGATCTGTGGTGTTGTGTCAGATGCGGTGTGGGACGCGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512663.5
CDS-3UTR TCA 90 bp GTAGTGGGAGGAAGAGGTGGGCCACCGCTGGACACTCTTGGGCCGAGGGGCAAGTCTGCACCGTATCTTTaGTCTTCCGGCAGCACTGTG +
Preference number: 4 (lower is better)
Translates to: VVGGRGGPPLDTLGPRGKSAPYL*SSGSTV
Trigger: CACAGTGCTGCCGGAAGATCAAAGATACGGTGCAGA...CTTGCCCCTCGGCCCAAGAGTGTCCAGCGGTGGCCCACCTCTTCCTCCCACTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313386.9
ENST00000515098.5
ENST00000542098.2
CDS-3UTR TCA 90 bp TGCTCCCCTCAGTGGAACTCCTCAGCCAGGCGCTCTGAAACCAACCACAGTCCAACTCCAGGGAGCTGTTaGGTTCCAGCAGGCGCTGCC +
Preference number: 4 (lower is better)
Translates to: CSPQWNSSARRSETNHSPTPGSC*VPAGAA
Trigger: GGCAGCGCCTGCTGGAACTCAACAGCTCCCTGGAGT...TGGACTGTGGTTGGTTTCAGAGCGCCTGGCTGAGGAGTTCCACTGAGGGGAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313386.9
ENST00000515098.5
ENST00000542098.2
CDS-3UTR TCA 90 bp GGCTGCTCCAGTGCTCCCCTCAGTGGAACTCCTCAGCCAGGCGCTCTGAAACCACTCAGCCAGGCGCTCTaGAACCAACCACAGTCCACT +
Preference number: 4 (lower is better)
Translates to: GCSSAPLSGTPQPGALKPLSQAL*NQPQST
Trigger: AGTGGACTGTGGTTGGTTTCAGAGCGCCTGGCTGAG...TGGTTTCAGAGCGCCTGGCTGAGGAGTTCCACTGAGGGGAGCACTGGAGCAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313386.9
ENST00000515098.5
ENST00000542098.2
CDS-3UTR TCA 90 bp CTCTGCCAAAGGGCTGCTCCAGTGCTCCCCTCAGTGGAACTCCTCAGCCAGGCGGCTCAAGCTGAGAACTaGTCCTGCTGCTATCCCAGC +
Preference number: 4 (lower is better)
Translates to: LCQRAAPVLPSVELLSQAAQAEN*SCCYPS
Trigger: GCTGGGATAGCAGCAGGATCAGTTCTCAGCTTGAGC...CGCCTGGCTGAGGAGTTCCACTGAGGGGAGCACTGGAGCAGCCCTTTGGCAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313386.9
ENST00000515098.5
CDS-3UTR GCA 90 bp TGCTGCTGTTCCCGCGCGTCCCACACCGCATCTGACACAACACCACAGATCTCATCCACGCACGCACACTaGTCCATGGTGGCCTCAGCC +
Preference number: 4 (lower is better)
Translates to: CCCSRASHTASDTTPQISSTHAH*SMVASA
Trigger: GGCTGAGGCCACCATGGAGCAGTGTGCGTGCGTGGA...TGAGATCTGTGGTGTTGTGTCAGATGCGGTGTGGGACGCGCGGGAACAGCAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512663.5
CDS-3UTR GCA 90 bp TGCTGTTCCCGCGCGTCCCACACCGCATCTGACACAACACCACAGATCTCAGAGTGCAGGATCTGCTGCTaGTGTTCCCGCGCGTCCCAC +
Preference number: 4 (lower is better)
Translates to: CCSRASHTASDTTPQISECRICC*CSRASH
Trigger: GTGGGACGCGCGGGAACAGCAGCAGCAGATCCTGCA...CTCTGAGATCTGTGGTGTTGTGTCAGATGCGGTGTGGGACGCGCGGGAACAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512663.5
ENST00000512811.5
CDS-3UTR GCA 90 bp GGCCGAGGGGCAAGGGTGGACATAGCATTGGCATGGCAGCAAGAGACTTGGCTGATCTGCAGGATCTGCTaGTGCTGTTCCCGCGCGTCC +
Preference number: 4 (lower is better)
Translates to: GRGARVDIALAWQQETWLICRIC*CCSRAS
Trigger: GGACGCGCGGGAACAGCAGCAGCAGATCCTGCAGAT...CAGCCAAGTCTCTTGCTGCCATGCCAATGCTATGTCCACCCTTGCCCCTCGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313386.9
ENST00000515098.5
ENST00000542098.2
CDS-3UTR GCA 90 bp TCCCGCGCGTCCCACACCGCATCTGACACAACACCACAGATCTCAGAGTCGAAGGCCATCTGCAGGATCTaGTGCTGCTGTTCCCGCGCG +
Preference number: 4 (lower is better)
Translates to: SRASHTASDTTPQISESKAICRI*CCCSRA
Trigger: CGCGCGGGAACAGCAGCAGCAGATCCTGCAGATGGC...CTTCGACTCTGAGATCTGTGGTGTTGTGTCAGATGCGGTGTGGGACGCGCGGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512663.5
ENST00000512811.5
CDS-3UTR GCA 90 bp GAGGTGGGCCACCGCTGGACACTCTTGGGCCGAGGGGCAAGGGTGGACATAGCAAAGAGGCGGATGAAGTaGAGTCGGTGCAGCTTGAAC +
Preference number: 4 (lower is better)
Translates to: EVGHRWTLLGRGARVDIAKRRMK*SRCSLN
Trigger: GTTCAAGCTGCACCGACTGCACTTCATCCGCCTCTT...TGCTATGTCCACCCTTGCCCCTCGGCCCAAGAGTGTCCAGCGGTGGCCCACCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313386.9
ENST00000515098.5
ENST00000542098.2
CDS-3UTR GCA 90 bp CTTGGGCCGAGGGGCAAGGGTGGACATAGCATTGGCATGGCAGCAAGAGACTTGCTTCGCGGGGCCTCCTaGCAAGAGGCGGATGAAGTG +
Preference number: 4 (lower is better)
Translates to: LGPRGKGGHSIGMAARDLLRGAS*QEADEV
Trigger: CACTTCATCCGCCTCTTGGCAGGAGGCCCCGCGAAG...CAAGTCTCTTGCTGCCATGCCAATGCTATGTCCACCCTTGCCCCTCGGCCCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000313386.9
ENST00000515098.5
ENST00000542098.2
CDS-3UTR GCA 90 bp ACTGAAGTTGACCACCCTACCGAGACAGACCAAGGCTCACAGGTGAAAACCCCTCTGAGGGCCTCCAGCTaGTTCGCGGGGCCTCCTGCC +
Preference number: 4 (lower is better)
Translates to: TEVDHPTETDQGSQVKTPLRASS*FAGPPA
Trigger: GGCAGGAGGCCCCGCGAAGCAGCTGGAGGCCCTCAG...AGGGGTTTTCACCTGTGAGCCTTGGTCTGTCTCGGTAGGGTGGTCAACTTCAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000313386.9
ENST00000515098.5
ENST00000542098.2
CDS-3UTR GCA 90 bp GTTGACCACCCTACCGAGACAGACCAAGGCTCACAGGTGAAAACCCCTTTCAACCTGAGGGCCTCCAGCTaGTTCGCGGGGCCTCCTGCC +
Preference number: 4 (lower is better)
Translates to: VDHPTETDQGSQVKTPFNLRASS*FAGPPA
Trigger: GGCAGGAGGCCCCGCGAAGCAGCTGGAGGCCCTCAG...GTTGAAAGGGGTTTTCACCTGTGAGCCTTGGTCTGTCTCGGTAGGGTGGTCAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000313386.9
ENST00000515098.5
ENST00000542098.2
CDS-3UTR GCA 90 bp TCTCCCTTTCCTTATGCCATGGAGCCAGGTGCCAGGCGTGGGCTGGTCCATCTCCCTCTGCCAAAGGGCTaGTCCAGTGCTCCCCTCAGT +
Preference number: 4 (lower is better)
Translates to: SPFPYAMEPGARRGLVHLPLPKG*SSAPLS
Trigger: ACTGAGGGGAGCACTGGAGCAGCCCTTTGGCAGAGG...GAGATGGACCAGCCCACGCCTGGCACCTGGCTCCATGGCATAAGGAAAGGGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313386.9
ENST00000515098.5
ENST00000542098.2
CDS-3UTR CCA 90 bp CCGAGGGGCAAGGGTGGACATAGCATTGGCATGGCAGCAAGAGACTTGGCTGAGAGCAGGCGCTGCCTGTaGGAGACGGCCCATTCCAAC +
Preference number: 4 (lower is better)
Translates to: PRGKGGHSIGMAARDLAESRRCL*ETAHSN
Trigger: GTTGGAATGGGCCGTCTCCCACAGGCAGCGCCTGCT...CTCAGCCAAGTCTCTTGCTGCCATGCCAATGCTATGTCCACCCTTGCCCCTCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313386.9
ENST00000515098.5
ENST00000542098.2
CDS-3UTR CCA 90 bp GCAAGGGTGGACATAGCATTGGCATGGCAGCAAGAGACTTGGCTGAGGGCAGGGACCTGGATCTCCCGCTaGTGCAGCCGAGCAAAGGGC +
Preference number: 4 (lower is better)
Translates to: ARVDIALAWQQETWLRAGTWISR*CSRAKG
Trigger: GCCCTTTGCTCGGCTGCACCAGCGGGAGATCCAGGT...CCCTGCCCTCAGCCAAGTCTCTTGCTGCCATGCCAATGCTATGTCCACCCTTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313386.9
ENST00000515098.5
ENST00000542098.2
CDS-3UTR CCA 90 bp GGCCGAGGGGCAAGGGTGGACATAGCATTGGCATGGCAGCAAGAGACTTGGCTGTCTGCTGGCGGAGGATaGGGCAAGCGAACACGGAGT +
Preference number: 4 (lower is better)
Translates to: GRGARVDIALAWQQETWLSAGGG*GKRTRS
Trigger: ACTCCGTGTTCGCTTGCCCCATCCTCCGCCAGCAGA...CAGCCAAGTCTCTTGCTGCCATGCCAATGCTATGTCCACCCTTGCCCCTCGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313386.9
ENST00000515098.5
ENST00000542098.2
CDS-3UTR CCA 90 bp TCTCCCTTTCCTTATGCCATGGAGCCAGGTGCCAGGCGTGGGCTGGTCCATCTCGAATCTGACGTCTGCTaGCGGAGGATGGGGCAAGCG +
Preference number: 4 (lower is better)
Translates to: SPFPYAMEPGARRGLVHLESDVC*RRMGQA
Trigger: CGCTTGCCCCATCCTCCGCCAGCAGACGTCAGATTC...GAGATGGACCAGCCCACGCCTGGCACCTGGCTCCATGGCATAAGGAAAGGGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313386.9
ENST00000515098.5
ENST00000542098.2
CDS-3UTR CCA 90 bp CCGAGGGGCAAGGGTGGACATAGCATTGGCATGGCAGCAAGAGACTTGGCTGAGCAGTGCTCCCCTCAGTaGAACTCCTCAGCCAGGCGC +
Preference number: 4 (lower is better)
Translates to: PRGKGGHSIGMAARDLAEQCSPQ*NSSARR
Trigger: GCGCCTGGCTGAGGAGTTCCACTGAGGGGAGCACTG...CTCAGCCAAGTCTCTTGCTGCCATGCCAATGCTATGTCCACCCTTGCCCCTCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000313386.9
ENST00000515098.5
ENST00000542098.2
CDS-3UTR CCA 90 bp CTCTGCCAAAGGGCTGCTCCAGTGCTCCCCTCAGTGGAACTCCTCAGCCAGGCGCAGGGCCGGGTGCTTTaGCTCAAGCTGAGAACTGAT +
Preference number: 4 (lower is better)
Translates to: LCQRAAPVLPSVELLSQAQGRVL*LKLRTD
Trigger: ATCAGTTCTCAGCTTGAGCCAAAGCACCCGGCCCTG...CGCCTGGCTGAGGAGTTCCACTGAGGGGAGCACTGGAGCAGCCCTTTGGCAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313386.9
ENST00000515098.5
CDS-3UTR CCA 90 bp TCTCCCTTTCCTTATGCCATGGAGCCAGGTGCCAGGCGTGGGCTGGTCCATCTCGTTGGGCCAGCGAGTTaGTGGGCGGGAAGAGTGAAG +
Preference number: 4 (lower is better)
Translates to: SPFPYAMEPGARRGLVHLVGPAS*WAGRVK
Trigger: CTTCACTCTTCCCGCCCACCAACTCGCTGGCCCAAC...GAGATGGACCAGCCCACGCCTGGCACCTGGCTCCATGGCATAAGGAAAGGGAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313386.9
ENST00000515098.5
CDS-3UTR CCA 90 bp TCTGTGGGTGTTTTCTTAAGCAGCAGCTGCTGGTTGGGCCAGCGAGTTGGTGGGGCAGCAGCTGCTGGTTaGGCCAGCGAGTTGGTGGGC +
Preference number: 4 (lower is better)
Translates to: SVGVFLSSSCWLGQRVGGAAAAG*ASELVG
Trigger: GCCCACCAACTCGCTGGCCCAACCAGCAGCTGCTGC...CCCACCAACTCGCTGGCCCAACCAGCAGCTGCTGCTTAAGAAAACACCCACAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313386.9
ENST00000515098.5
CDS-3UTR CCA 90 bp TGCCAAAGGGCTGCTCCAGTGCTCCCCTCAGTGGAACTCCTCAGCCAGGCGCTCTTAAGCAGCAGCTGCTaGTTGGGCCAGCGAGTTGGT +
Preference number: 4 (lower is better)
Translates to: CQRAAPVLPSVELLSQALLSSSC*LGQRVG
Trigger: ACCAACTCGCTGGCCCAACCAGCAGCTGCTGCTTAA...GAGCGCCTGGCTGAGGAGTTCCACTGAGGGGAGCACTGGAGCAGCCCTTTGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313386.9
ENST00000515098.5
CDS-3UTR CCA 90 bp AAGGACTCAGAGGGTTCTGTGCTGATGCTCAGCTGCCCAGGGCCGGGTGCTTTGCAGCCCCTGCTGGGCTaGAGCCCTTTCATAGTTGCC +
Preference number: 4 (lower is better)
Translates to: KDSEGSVLMLSCPGPGALQPLLG*SPFIVA
Trigger: GGCAACTATGAAAGGGCTCCAGCCCAGCAGGGGCTG...CAAAGCACCCGGCCCTGGGCAGCTGAGCATCAGCACAGAACCCTCTGAGTCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313386.9
ENST00000515098.5
CDS-3UTR CCA 90 bp CACTGGATACCTGCTGGCCATGTTTTTGTTTGCGGCAGCCACCAGGCCGTGCCCCAGCCCCTGCTGGGCTaGAGCCCTTTCATAGTTGCC +
Preference number: 4 (lower is better)
Translates to: HWIPAGHVFVCGSHQAVPQPLLG*SPFIVA
Trigger: GGCAACTATGAAAGGGCTCCAGCCCAGCAGGGGCTG...GGGCACGGCCTGGTGGCTGCCGCAAACAAAAACATGGCCAGCAGGTATCCAGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000313386.9
ENST00000515098.5
CDS-3UTR CCA 90 bp GCTGTTCCCGCGCGTCCCACACCGCATCTGACACAACACCACAGATCTCAGAGTGAGAGAGGGGTCCCCTaGAGGGCCGGTTTCAAGGAG +
Preference number: 4 (lower is better)
Translates to: AVPARPTPHLTQHHRSQSERGVP*RAGFKE
Trigger: CTCCTTGAAACCGGCCCTCCAGGGGACCCCTCTCTC...ACTCTGAGATCTGTGGTGTTGTGTCAGATGCGGTGTGGGACGCGCGGGAACAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512663.5
CDS-3UTR CCA 90 bp CCGAGGGGCAAGGGTGGACATAGCATTGGCATGGCAGCAAGAGACTTGGCTGAGGGTGGCACACGCCTGTaGTCCCAGCTCCTCAGAAGG +
Preference number: 4 (lower is better)
Translates to: PRGKGGHSIGMAARDLAEGGTRL*SQLLRR
Trigger: CCTTCTGAGGAGCTGGGACCACAGGCGTGTGCCACC...CTCAGCCAAGTCTCTTGCTGCCATGCCAATGCTATGTCCACCCTTGCCCCTCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000515098.5
ENST00000542098.2
CDS-3UTR CCA 90 bp TGCTCCCCTCAGTGGAACTCCTCAGCCAGGCGCTCTGAAACCAACCACAGTCCAATGGTGGCCTCAGCCTaGGCATGGTGGCACACGCCT +
Preference number: 4 (lower is better)
Translates to: CSPQWNSSARRSETNHSPMVASA*AWWHTP
Trigger: AGGCGTGTGCCACCATGCCCAGGCTGAGGCCACCAT...TGGACTGTGGTTGGTTTCAGAGCGCCTGGCTGAGGAGTTCCACTGAGGGGAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515098.5
CDS-3UTR CCA 90 bp GACTTGGCTGAGGGCAGGGGTGGAAGGATGTCTACTGCTGAAGACCAAATCCCTGGTCCCCTGGAGGGCTaGGCATGGTGGCACACGCCT +
Preference number: 4 (lower is better)
Translates to: DLAEGRGGRMSTAEDQIPGPLEG*AWWHTP
Trigger: AGGCGTGTGCCACCATGCCCAGCCCTCCAGGGGACC...AGGGATTTGGTCTTCAGCAGTAGACATCCTTCCACCCCTGCCCTCAGCCAAGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542098.2
3UTR CAA 72 bp GCCTGGACACTGGATACCTGCTGGCCATGTTTTTGTTaGCGGCAGCCACCAGGCCGTGCCCAGTCCCTGTGT +
Preference number: 4 (lower is better)
Translates to: AWTLDTCWPCFC*RQPPGRAQSLC
Trigger: ACACAGGGACTGGGCACGGCCTGGTGGCTGCCGCAAACAAAAACATGGCCAGCAGGTATCCAGTGTCCAGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313386.9
ENST00000515098.5
3UTR CAA 72 bp TCCTGCCTGGACACTGGATACCTGCTGGCCATGTTTTaGTTTGCGGCAGCCACCAGGCCGTGCCCAGTCCCT +
Preference number: 4 (lower is better)
Translates to: SCLDTGYLLAMF*FAAATRPCPVP
Trigger: AGGGACTGGGCACGGCCTGGTGGCTGCCGCAAACAAAAACATGGCCAGCAGGTATCCAGTGTCCAGGCAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313386.9
ENST00000515098.5
CDS-3UTR TCA 90 bp CTCTGCCAAAGGGCTGCTCCAGTGCTCCCCTCAGTGGAACTCCTCAGCCAGGCGTCTGCACCGTATCTTTaGTCTTCCGGCAGCACTGTG +
Preference number: 4 (lower is better)
Translates to: LCQRAAPVLPSVELLSQASAPYL*SSGSTV
Trigger: CACAGTGCTGCCGGAAGATCAAAGATACGGTGCAGA...CGCCTGGCTGAGGAGTTCCACTGAGGGGAGCACTGGAGCAGCCCTTTGGCAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313386.9
ENST00000515098.5
ENST00000542098.2
CDS-3UTR TCA 90 bp AGAGGGTTCTGTGCTGATGCTCAGCTGCCCAGGGCCGGGTGCTTTGGCTCAAGCCTGAGCATGCCCTGCTaGTACAGGTGTTCCACGATG +
Preference number: 4 (lower is better)
Translates to: RGFCADAQLPRAGCFGSSLSMPC*YRCSTM
Trigger: CATCGTGGAACACCTGTATCAGCAGGGCATGCTCAG...GCTTGAGCCAAAGCACCCGGCCCTGGGCAGCTGAGCATCAGCACAGAACCCTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313386.9
ENST00000515098.5
CDS-3UTR TCA 90 bp CACTGGATACCTGCTGGCCATGTTTTTGTTTGCGGCAGCCACCAGGCCGTGCCCCTCAGCCAGGCGCTCTaGAACCAACCACAGTCCACT +
Preference number: 4 (lower is better)
Translates to: HWIPAGHVFVCGSHQAVPLSQAL*NQPQST
Trigger: AGTGGACTGTGGTTGGTTTCAGAGCGCCTGGCTGAG...GGGCACGGCCTGGTGGCTGCCGCAAACAAAAACATGGCCAGCAGGTATCCAGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313386.9
ENST00000515098.5
CDS-3UTR TCA 90 bp TCTGTGGGTGTTTTCTTAAGCAGCAGCTGCTGGTTGGGCCAGCGAGTTGGTGGGCAGAGGGTTCTGTGCTaGTGCTCAGCTGCCCAGGGC +
Preference number: 4 (lower is better)
Translates to: SVGVFLSSSCWLGQRVGGQRVLC*CSAAQG
Trigger: GCCCTGGGCAGCTGAGCATCAGCACAGAACCCTCTG...CCCACCAACTCGCTGGCCCAACCAGCAGCTGCTGCTTAAGAAAACACCCACAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313386.9
ENST00000515098.5
CDS-3UTR TCA 90 bp GGCTGCTCCAGTGCTCCCCTCAGTGGAACTCCTCAGCCAGGCGCTCTGAAACCAACACTCCAGACTGCATaGCAGAGTGAGGCCCTGTCT +
Preference number: 4 (lower is better)
Translates to: GCSSAPLSGTPQPGALKPTLQTA*QSEALS
Trigger: AGACAGGGCCTCACTCTGTCATGCAGTCTGGAGTGT...TGGTTTCAGAGCGCCTGGCTGAGGAGTTCCACTGAGGGGAGCACTGGAGCAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313386.9
ENST00000515098.5
CDS-3UTR GCA 90 bp GAGGAAGAGGTGGGCCACCGCTGGACACTCTTGGGCCGAGGGGCAAGGGTGGACCCACTCGGGATACACTaGTGTGAATGTCCTTATGGT +
Preference number: 4 (lower is better)
Translates to: EEEVGHRWTLLGRGARVDPLGIH*CECPYG
Trigger: ACCATAAGGACATTCACAGCAGTGTATCCCGAGTGG...GTCCACCCTTGCCCCTCGGCCCAAGAGTGTCCAGCGGTGGCCCACCTCTTCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313386.9
ENST00000515098.5
ENST00000542098.2
CDS-3UTR GCA 90 bp GCCAAAGGGCTGCTCCAGTGCTCCCCTCAGTGGAACTCCTCAGCCAGGCGCTCTTCCTGTCAATGGCTTTaGCCACTCGGGATACACTGC +
Preference number: 4 (lower is better)
Translates to: AKGLLQCSPQWNSSARRSSCQWL*PLGIHC
Trigger: GCAGTGTATCCCGAGTGGGCAAAGCCATTGACAGGA...AGAGCGCCTGGCTGAGGAGTTCCACTGAGGGGAGCACTGGAGCAGCCCTTTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313386.9
ENST00000515098.5
ENST00000542098.2
CDS-3UTR GCA 90 bp CCCGCGCGTCCCACACCGCATCTGACACAACACCACAGATCTCAGAGTCGAAGTATCTGCAGGATCTGCTaGTGCTGTTCCCGCGCGTCC +
Preference number: 4 (lower is better)
Translates to: PARPTPHLTQHHRSQSRSICRIC*CCSRAS
Trigger: GGACGCGCGGGAACAGCAGCAGCAGATCCTGCAGAT...ACTTCGACTCTGAGATCTGTGGTGTTGTGTCAGATGCGGTGTGGGACGCGCGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512663.5
ENST00000512811.5
CDS-3UTR GCA 90 bp TGCCAAAGGGCTGCTCCAGTGCTCCCCTCAGTGGAACTCCTCAGCCAGGCGCTCATGAAGTGCAGTCGGTaGAGCTTGAACTCCAGGGAG +
Preference number: 4 (lower is better)
Translates to: CQRAAPVLPSVELLSQALMKCSR*SLNSRE
Trigger: CTCCCTGGAGTTCAAGCTGCACCGACTGCACTTCAT...GAGCGCCTGGCTGAGGAGTTCCACTGAGGGGAGCACTGGAGCAGCCCTTTGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313386.9
ENST00000515098.5
ENST00000542098.2
CDS-3UTR GCA 90 bp AGCCTCTGCCAAAGGGCTGCTCCAGTGCTCCCCTCAGTGGAACTCCTCAGCCAGGATTCCAGACCCCAGTaGACTGCCGCTGCTCAATCA +
Preference number: 4 (lower is better)
Translates to: SLCQRAAPVLPSVELLSQDSRPQ*TAAAQS
Trigger: TGATTGAGCAGCGGCAGTGCACTGGGGTCTGGAATC...CTGGCTGAGGAGTTCCACTGAGGGGAGCACTGGAGCAGCCCTTTGGCAGAGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000313386.9
ENST00000515098.5
ENST00000542098.2
CDS-3UTR GCA 90 bp GTAGTGGGAGGAAGAGGTGGGCCACCGCTGGACACTCTTGGGCCGAGGGGCAAGGAAGACCAAATCCCTTaGCACTCTGTCGGTTGCTAC +
Preference number: 4 (lower is better)
Translates to: VVGGRGGPPLDTLGPRGKEDQIP*HSVGCY
Trigger: GTAGCAACCGACAGAGTGGCAAGGGATTTGGTCTTC...CTTGCCCCTCGGCCCAAGAGTGTCCAGCGGTGGCCCACCTCTTCCTCCCACTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313386.9
ENST00000515098.5
ENST00000542098.2
CDS-3UTR CCA 90 bp TCTGAAACCAACCACAGTCCACTGAAGTTGACCACCCTACCGAGACAGACCAAGGAGAGAGGGGTCCCCTaGAGGGCTGCGCTGGCCAGC +
Preference number: 4 (lower is better)
Translates to: SETNHSPLKLTTLPRQTKERGVP*RAALAS
Trigger: GCTGGCCAGCGCAGCCCTCCAGGGGACCCCTCTCTC...CTTGGTCTGTCTCGGTAGGGTGGTCAACTTCAGTGGACTGTGGTTGGTTTCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313386.9
ENST00000515098.5
CDS-3UTR CCA 90 bp TGCTCCCCTCAGTGGAACTCCTCAGCCAGGCGCTCTGAAACCAACCACAGTCCACTGCCCATCATCACCTaGATCTCCCGCTGGTGCAGC +
Preference number: 4 (lower is better)
Translates to: CSPQWNSSARRSETNHSPLPIIT*ISRWCS
Trigger: GCTGCACCAGCGGGAGATCCAGGTGATGATGGGCAG...TGGACTGTGGTTGGTTTCAGAGCGCCTGGCTGAGGAGTTCCACTGAGGGGAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313386.9
ENST00000515098.5
ENST00000542098.2
CDS-3UTR CCA 90 bp CCGAGGGGCAAGGGTGGACATAGCATTGGCATGGCAGCAAGAGACTTGGCTGAGGAATCTGACGTCTGCTaGCGGAGGATGGGGCAAGCG +
Preference number: 4 (lower is better)
Translates to: PRGKGGHSIGMAARDLAEESDVC*RRMGQA
Trigger: CGCTTGCCCCATCCTCCGCCAGCAGACGTCAGATTC...CTCAGCCAAGTCTCTTGCTGCCATGCCAATGCTATGTCCACCCTTGCCCCTCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000313386.9
ENST00000515098.5
ENST00000542098.2
CDS-3UTR CCA 90 bp GGCTGCTCCAGTGCTCCCCTCAGTGGAACTCCTCAGCCAGGCGCTCTGAAACCACCGGGTTCTGCTCCATaGGACAGTAGGGACACTTCA +
Preference number: 4 (lower is better)
Translates to: GCSSAPLSGTPQPGALKPPGSAP*DSRDTS
Trigger: TGAAGTGTCCCTACTGTCCCATGGAGCAGAACCCGG...TGGTTTCAGAGCGCCTGGCTGAGGAGTTCCACTGAGGGGAGCACTGGAGCAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313386.9
ENST00000515098.5
ENST00000542098.2
CDS-3UTR CCA 90 bp TCTGTGGGTGTTTTCTTAAGCAGCAGCTGCTGGTTGGGCCAGCGAGTTGGTGGGCAGTGCTCCCCTCAGTaGAACTCCTCAGCCAGGCGC +
Preference number: 4 (lower is better)
Translates to: SVGVFLSSSCWLGQRVGGQCSPQ*NSSARR
Trigger: GCGCCTGGCTGAGGAGTTCCACTGAGGGGAGCACTG...CCCACCAACTCGCTGGCCCAACCAGCAGCTGCTGCTTAAGAAAACACCCACAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313386.9
ENST00000515098.5
CDS-3UTR CCA 90 bp AAGGACTCAGAGGGTTCTGTGCTGATGCTCAGCTGCCCAGGGCCGGGTGCTTTGCCTTTCCTTATGCCATaGAGCCAGGTGCCAGGCGTG +
Preference number: 4 (lower is better)
Translates to: KDSEGSVLMLSCPGPGALPFLMP*SQVPGV
Trigger: CACGCCTGGCACCTGGCTCCATGGCATAAGGAAAGG...CAAAGCACCCGGCCCTGGGCAGCTGAGCATCAGCACAGAACCCTCTGAGTCCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313386.9
ENST00000515098.5
CDS-3UTR CCA 90 bp TCTCCCTTTCCTTATGCCATGGAGCCAGGTGCCAGGCGTGGGCTGGTCCATCTCCCTTTCCTTATGCCATaGAGCCAGGTGCCAGGCGTG +
Preference number: 4 (lower is better)
Translates to: SPFPYAMEPGARRGLVHLPFLMP*SQVPGV
Trigger: CACGCCTGGCACCTGGCTCCATGGCATAAGGAAAGG...GAGATGGACCAGCCCACGCCTGGCACCTGGCTCCATGGCATAAGGAAAGGGAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313386.9
ENST00000515098.5
ENST00000542098.2
CDS-3UTR CCA 90 bp GGCTGCTCCAGTGCTCCCCTCAGTGGAACTCCTCAGCCAGGCGCTCTGAAACCACAGGGCCGGGTGCTTTaGCTCAAGCTGAGAACTGAT +
Preference number: 4 (lower is better)
Translates to: GCSSAPLSGTPQPGALKPQGRVL*LKLRTD
Trigger: ATCAGTTCTCAGCTTGAGCCAAAGCACCCGGCCCTG...TGGTTTCAGAGCGCCTGGCTGAGGAGTTCCACTGAGGGGAGCACTGGAGCAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313386.9
ENST00000515098.5
CDS-3UTR TCA 90 bp AGACCCACTTCATGGAAGCCTAAAGCCCCCACATCAGGAACACCCCCATTCCTACTGGGCCGGGACCTATaGGTCTGGGACTCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: RPTSWKPKAPTSGTPPFLLGRDL*VWDSSS
Trigger: GGAGCTGGAGTCCCAGACTCATAGGTCCCGGCCCAG...TAGGAATGGGGGTGTTCCTGATGTGGGGGCTTTAGGCTTCCATGAAGTGGGTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000313386.9
ENST00000515098.5
CDS-3UTR TCA 90 bp AAGGACTCAGAGGGTTCTGTGCTGATGCTCAGCTGCCCAGGGCCGGGTGCTTTGGTCCCACACCGCATCTaGCACAACACCACAGATCTC +
Preference number: 4 (lower is better)
Translates to: KDSEGSVLMLSCPGPGALVPHRI*HNTTDL
Trigger: GAGATCTGTGGTGTTGTGTCAGATGCGGTGTGGGAC...CAAAGCACCCGGCCCTGGGCAGCTGAGCATCAGCACAGAACCCTCTGAGTCCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313386.9
ENST00000515098.5
CDS-3UTR TCA 90 bp TCTCCCTTTCCTTATGCCATGGAGCCAGGTGCCAGGCGTGGGCTGGTCCATCTCGTCCCACACCGCATCTaGCACAACACCACAGATCTC +
Preference number: 4 (lower is better)
Translates to: SPFPYAMEPGARRGLVHLVPHRI*HNTTDL
Trigger: GAGATCTGTGGTGTTGTGTCAGATGCGGTGTGGGAC...GAGATGGACCAGCCCACGCCTGGCACCTGGCTCCATGGCATAAGGAAAGGGAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313386.9
ENST00000515098.5
ENST00000542098.2
CDS-3UTR TCA 90 bp CTGAGGGCAGGGGTGGAAGGATGTCTACTGCTGAAGACCAAATCCCTTGCCACTGCTCCTCGGCCACGCTaGGCATGCCCTGCTGATACA +
Preference number: 4 (lower is better)
Translates to: LRAGVEGCLLLKTKSLATAPRPR*ACPADT
Trigger: TGTATCAGCAGGGCATGCTCAGCGTGGCCGAGGAGC...AGTGGCAAGGGATTTGGTCTTCAGCAGTAGACATCCTTCCACCCCTGCCCTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313386.9
ENST00000515098.5
ENST00000542098.2
CDS-3UTR TCA 90 bp TCTGCTGCTGCTGTTCCCGCGCGTCCCACACCGCATCTGACACAACACCACAGAGTCCACATTCAGCGTTaGTTCCTGGCACAGCTCCTC +
Preference number: 4 (lower is better)
Translates to: SAAAVPARPTPHLTQHHRVHIQR*FLAQLL
Trigger: GAGGAGCTGTGCCAGGAATCAACGCTGAATGTGGAC...TCTGTGGTGTTGTGTCAGATGCGGTGTGGGACGCGCGGGAACAGCAGCAGCAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512811.5
CDS-3UTR TCA 90 bp CAGTGGAACTCCTCAGCCAGGCGCTCTGAAACCAACCACAGTCCACTGAAGTTGCAGGTGGCAGTAGGGTaGCTTCTCCAAGCCCAGCCG +
Preference number: 4 (lower is better)
Translates to: QWNSSARRSETNHSPLKLQVAVG*LLQAQP
Trigger: CGGCTGGGCTTGGAGAAGTCACCCTACTGCCACCTG...CAACTTCAGTGGACTGTGGTTGGTTTCAGAGCGCCTGGCTGAGGAGTTCCACTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313386.9
ENST00000515098.5
ENST00000542098.2
CDS-3UTR TCA 90 bp TCTGTGGGTGTTTTCTTAAGCAGCAGCTGCTGGTTGGGCCAGCGAGTTGGTGGGGGGAGGGTTGGAATCTaGCGTCTGCTGGCGGAGGAT +
Preference number: 4 (lower is better)
Translates to: SVGVFLSSSCWLGQRVGGGRVGI*RLLAED
Trigger: ATCCTCCGCCAGCAGACGTCAGATTCCAACCCTCCC...CCCACCAACTCGCTGGCCCAACCAGCAGCTGCTGCTTAAGAAAACACCCACAGA
59% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000313386.9
ENST00000515098.5
CDS-3UTR TCA 90 bp GCCAAAGGGCTGCTCCAGTGCTCCCCTCAGTGGAACTCCTCAGCCAGGCGCTCTGATGGTACATACTGTTaGGGCTGTAGTGGGAGGAAG +
Preference number: 4 (lower is better)
Translates to: AKGLLQCSPQWNSSARRSDGTYC*GCSGRK
Trigger: CTTCCTCCCACTACAGCCTCAACAGTATGTACCATC...AGAGCGCCTGGCTGAGGAGTTCCACTGAGGGGAGCACTGGAGCAGCCCTTTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313386.9
ENST00000515098.5
ENST00000542098.2
CDS-3UTR GCA 90 bp AAGCTCCCCGCAGTCAGGGATGCAAGTTGTGTTCTTCCTGCCTGGACACTGGATTCCACGCACGCACACTaGTCCATGGTGGCCTCAGCC +
Preference number: 4 (lower is better)
Translates to: KLPAVRDASCVLPAWTLDSTHAH*SMVASA
Trigger: GGCTGAGGCCACCATGGAGCAGTGTGCGTGCGTGGA...ATCCAGTGTCCAGGCAGGAAGAACACAACTTGCATCCCTGACTGCGGGGAGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313386.9
ENST00000515098.5
CDS-3UTR GCA 90 bp GCGCGTCCCACACCGCATCTGACACAACACCACAGATCTCAGAGTCGAAGTTCCATCTGCAGGATCTGCTaGTGCTGTTCCCGCGCGTCC +
Preference number: 4 (lower is better)
Translates to: ARPTPHLTQHHRSQSRSSICRIC*CCSRAS
Trigger: GGACGCGCGGGAACAGCAGCAGCAGATCCTGCAGAT...GGAACTTCGACTCTGAGATCTGTGGTGTTGTGTCAGATGCGGTGTGGGACGCGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512663.5
ENST00000512811.5
CDS-3UTR GCA 90 bp TCCTCAGCCAGGCGCTCTGAAACCAACCACAGTCCACTGAAGTTGACCACCCTAGCCATCTGCAGGATCTaGTGCTGCTGTTCCCGCGCG +
Preference number: 4 (lower is better)
Translates to: SSARRSETNHSPLKLTTLAICRI*CCCSRA
Trigger: CGCGCGGGAACAGCAGCAGCAGATCCTGCAGATGGC...TAGGGTGGTCAACTTCAGTGGACTGTGGTTGGTTTCAGAGCGCCTGGCTGAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313386.9
ENST00000515098.5
ENST00000542098.2
CDS-3UTR GCA 90 bp GACTTGGCTGAGGGCAGGGGTGGAAGGATGTCTACTGCTGAAGACCAAATCCCTAGTTCCAGCAGGCGCTaGCTGTGGGAGACGGCCCAT +
Preference number: 4 (lower is better)
Translates to: DLAEGRGGRMSTAEDQIPSSSRR*LWETAH
Trigger: ATGGGCCGTCTCCCACAGGCAGCGCCTGCTGGAACT...AGGGATTTGGTCTTCAGCAGTAGACATCCTTCCACCCCTGCCCTCAGCCAAGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313386.9
ENST00000515098.5
ENST00000542098.2
CDS-3UTR GCA 90 bp AGCCTCTGCCAAAGGGCTGCTCCAGTGCTCCCCTCAGTGGAACTCCTCAGCCAGATGAAGTGCAGTCGGTaGAGCTTGAACTCCAGGGAG +
Preference number: 4 (lower is better)
Translates to: SLCQRAAPVLPSVELLSQMKCSR*SLNSRE
Trigger: CTCCCTGGAGTTCAAGCTGCACCGACTGCACTTCAT...CTGGCTGAGGAGTTCCACTGAGGGGAGCACTGGAGCAGCCCTTTGGCAGAGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313386.9
ENST00000515098.5
ENST00000542098.2
CDS-3UTR GCA 90 bp AAGGACTCAGAGGGTTCTGTGCTGATGCTCAGCTGCCCAGGGCCGGGTGCTTTGGCAGGTACACCAGGCTaGCCATCATCACCTGGATCT +
Preference number: 4 (lower is better)
Translates to: KDSEGSVLMLSCPGPGALAGTPG*PSSPGS
Trigger: AGATCCAGGTGATGATGGGCAGCCTGGTGTACCTGC...CAAAGCACCCGGCCCTGGGCAGCTGAGCATCAGCACAGAACCCTCTGAGTCCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313386.9
ENST00000515098.5
CDS-3UTR GCA 90 bp GGCCGAGGGGCAAGGGTGGACATAGCATTGGCATGGCAGCAAGAGACTTGGCTGGCAGGTACACCAGGCTaGCCATCATCACCTGGATCT +
Preference number: 4 (lower is better)
Translates to: GRGARVDIALAWQQETWLAGTPG*PSSPGS
Trigger: AGATCCAGGTGATGATGGGCAGCCTGGTGTACCTGC...CAGCCAAGTCTCTTGCTGCCATGCCAATGCTATGTCCACCCTTGCCCCTCGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313386.9
ENST00000515098.5
ENST00000542098.2
CDS-3UTR GCA 90 bp GGCCGAGGGGCAAGGGTGGACATAGCATTGGCATGGCAGCAAGAGACTTGGCTGCCAGTGCACTGCCGCTaGTCAATCACAGCCTTGATG +
Preference number: 4 (lower is better)
Translates to: GRGARVDIALAWQQETWLPVHCR*SITALM
Trigger: CATCAAGGCTGTGATTGAGCAGCGGCAGTGCACTGG...CAGCCAAGTCTCTTGCTGCCATGCCAATGCTATGTCCACCCTTGCCCCTCGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313386.9
ENST00000515098.5
ENST00000542098.2
CDS-3UTR GCA 90 bp AAGGACTCAGAGGGTTCTGTGCTGATGCTCAGCTGCCCAGGGCCGGGTGCTTTGCCCCGCAGTCAGGGATaGAAGTTGTGTTCTTCCTGC +
Preference number: 4 (lower is better)
Translates to: KDSEGSVLMLSCPGPGALPRSQG*KLCSSC
Trigger: GCAGGAAGAACACAACTTGCATCCCTGACTGCGGGG...CAAAGCACCCGGCCCTGGGCAGCTGAGCATCAGCACAGAACCCTCTGAGTCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313386.9
ENST00000515098.5
CDS-3UTR GCA 90 bp GACTTGGCTGAGGGCAGGGGTGGAAGGATGTCTACTGCTGAAGACCAAATCCCTGTGCTGATGCTCAGCTaGCCAGGGCCGGGTGCTTTG +
Preference number: 4 (lower is better)
Translates to: DLAEGRGGRMSTAEDQIPVLMLS*PGPGAL
Trigger: CAAAGCACCCGGCCCTGGGCAGCTGAGCATCAGCAC...AGGGATTTGGTCTTCAGCAGTAGACATCCTTCCACCCCTGCCCTCAGCCAAGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313386.9
ENST00000515098.5
CDS-3UTR CCA 90 bp CTCTTGGGCCGAGGGGCAAGGGTGGACATAGCATTGGCATGGCAGCAAGAGACTTTCAGCGTTGATTCCTaGCACAGCTCCTCGGCCACG +
Preference number: 4 (lower is better)
Translates to: LLGRGARVDIALAWQQETFSVDS*HSSSAT
Trigger: CGTGGCCGAGGAGCTGTGCCAGGAATCAACGCTGAA...AGTCTCTTGCTGCCATGCCAATGCTATGTCCACCCTTGCCCCTCGGCCCAAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313386.9
ENST00000515098.5
ENST00000542098.2
CDS-3UTR CCA 90 bp GTGGAAGGATGTCTACTGCTGAAGACCAAATCCCTTGCCACTCTGTCGGTTGCTGCCAGGTGCCAGGCGTaGGCTGGTCCATCTCCCTCC +
Preference number: 4 (lower is better)
Translates to: VEGCLLLKTKSLATLSVAARCQA*AGPSPS
Trigger: GGAGGGAGATGGACCAGCCCACGCCTGGCACCTGGC...AGCAACCGACAGAGTGGCAAGGGATTTGGTCTTCAGCAGTAGACATCCTTCCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313386.9
ENST00000515098.5
ENST00000542098.2
CDS-3UTR CCA 90 bp CCTTTCATAGTTGCCATGTGGGAATGTAGGCCCTGTGTGGCTGGACCATGCCTTACCGCTGGACACTCTTaGGCCGAGGGGCAAGGGTGG +
Preference number: 4 (lower is better)
Translates to: PFIVAMWECRPCVAGPCLTAGHS*AEGQGW
Trigger: CCACCCTTGCCCCTCGGCCCAAGAGTGTCCAGCGGT...AAGGCATGGTCCAGCCACACAGGGCCTACATTCCCACATGGCAACTATGAAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313386.9
ENST00000515098.5
CDS-3UTR CCA 90 bp GCAAGGGTGGACATAGCATTGGCATGGCAGCAAGAGACTTGGCTGAGGGCAGGGCTCAGAAGGCTGAGGTaGGACGGAGGACTGCTTGAG +
Preference number: 4 (lower is better)
Translates to: ARVDIALAWQQETWLRAGLRRLR*DGGLLE
Trigger: CTCAAGCAGTCCTCCGTCCCACCTCAGCCTTCTGAG...CCCTGCCCTCAGCCAAGTCTCTTGCTGCCATGCCAATGCTATGTCCACCCTTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000515098.5
ENST00000542098.2
CDS-3UTR CCA 90 bp TCCTCAGCCAGGCGCTCTGAAACCAACCACAGTCCACTGAAGTTGACCACCCTAGGTGGCACACGCCTGTaGTCCCAGCTCCTCAGAAGG +
Preference number: 4 (lower is better)
Translates to: SSARRSETNHSPLKLTTLGGTRL*SQLLRR
Trigger: CCTTCTGAGGAGCTGGGACCACAGGCGTGTGCCACC...TAGGGTGGTCAACTTCAGTGGACTGTGGTTGGTTTCAGAGCGCCTGGCTGAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000515098.5
ENST00000542098.2
CDS-3UTR TCA 90 bp GGCTGCTCCAGTGCTCCCCTCAGTGGAACTCCTCAGCCAGGCGCTCTGAAACCACGGGATACACTGCTGTaGATGTCCTTATGGTCCGAA +
Preference number: 4 (lower is better)
Translates to: GCSSAPLSGTPQPGALKPRDTLL*MSLWSE
Trigger: TTCGGACCATAAGGACATTCACAGCAGTGTATCCCG...TGGTTTCAGAGCGCCTGGCTGAGGAGTTCCACTGAGGGGAGCACTGGAGCAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313386.9
ENST00000515098.5
ENST00000542098.2
CDS-3UTR TCA 90 bp CTTGGGCCGAGGGGCAAGGGTGGACATAGCATTGGCATGGCAGCAAGAGACTTGGTCCCACACCGCATCTaGCACAACACCACAGATCTC +
Preference number: 4 (lower is better)
Translates to: LGPRGKGGHSIGMAARDLVPHRI*HNTTDL
Trigger: GAGATCTGTGGTGTTGTGTCAGATGCGGTGTGGGAC...CAAGTCTCTTGCTGCCATGCCAATGCTATGTCCACCCTTGCCCCTCGGCCCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313386.9
ENST00000515098.5
ENST00000542098.2
CDS-3UTR TCA 90 bp TGCTGCTGTTCCCGCGCGTCCCACACCGCATCTGACACAACACCACAGATCTCAGTCCCACACCGCATCTaGCACAACACCACAGATCTC +
Preference number: 4 (lower is better)
Translates to: CCCSRASHTASDTTPQISVPHRI*HNTTDL
Trigger: GAGATCTGTGGTGTTGTGTCAGATGCGGTGTGGGAC...TGAGATCTGTGGTGTTGTGTCAGATGCGGTGTGGGACGCGCGGGAACAGCAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512663.5
ENST00000512811.5
CDS-3UTR TCA 90 bp GTTCCCGCGCGTCCCACACCGCATCTGACACAACACCACAGATCTCAGAGTCGACTGAGCATGCCCTGCTaGTACAGGTGTTCCACGATG +
Preference number: 4 (lower is better)
Translates to: VPARPTPHLTQHHRSQSRLSMPC*YRCSTM
Trigger: CATCGTGGAACACCTGTATCAGCAGGGCATGCTCAG...TCGACTCTGAGATCTGTGGTGTTGTGTCAGATGCGGTGTGGGACGCGCGGGAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512663.5
ENST00000512811.5
CDS-3UTR TCA 90 bp CTCTTGGGCCGAGGGGCAAGGGTGGACATAGCATTGGCATGGCAGCAAGAGACTGTCCACATTCAGCGTTaGTTCCTGGCACAGCTCCTC +
Preference number: 4 (lower is better)
Translates to: LLGRGARVDIALAWQQETVHIQR*FLAQLL
Trigger: GAGGAGCTGTGCCAGGAATCAACGCTGAATGTGGAC...AGTCTCTTGCTGCCATGCCAATGCTATGTCCACCCTTGCCCCTCGGCCCAAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313386.9
ENST00000515098.5
ENST00000542098.2
CDS-3UTR TCA 90 bp AAGCTCCCCGCAGTCAGGGATGCAAGTTGTGTTCTTCCTGCCTGGACACTGGATCTGCCAAGAGGCGGATaGAGTGCAGTCGGTGCAGCT +
Preference number: 4 (lower is better)
Translates to: KLPAVRDASCVLPAWTLDLPRGG*SAVGAA
Trigger: AGCTGCACCGACTGCACTTCATCCGCCTCTTGGCAG...ATCCAGTGTCCAGGCAGGAAGAACACAACTTGCATCCCTGACTGCGGGGAGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313386.9
ENST00000515098.5
CDS-3UTR TCA 90 bp AGCCTCTGCCAAAGGGCTGCTCCAGTGCTCCCCTCAGTGGAACTCCTCAGCCAGGATGGTACATACTGTTaGGGCTGTAGTGGGAGGAAG +
Preference number: 4 (lower is better)
Translates to: SLCQRAAPVLPSVELLSQDGTYC*GCSGRK
Trigger: CTTCCTCCCACTACAGCCTCAACAGTATGTACCATC...CTGGCTGAGGAGTTCCACTGAGGGGAGCACTGGAGCAGCCCTTTGGCAGAGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313386.9
ENST00000515098.5
ENST00000542098.2
CDS-3UTR TCA 90 bp AGAGGGTTCTGTGCTGATGCTCAGCTGCCCAGGGCCGGGTGCTTTGGCTCAAGCTGCTTTGGCTCAAGCTaGGAACTGATCCTGCTGCTA +
Preference number: 4 (lower is better)
Translates to: RGFCADAQLPRAGCFGSSCFGSS*ELILLL
Trigger: TAGCAGCAGGATCAGTTCTCAGCTTGAGCCAAAGCA...GCTTGAGCCAAAGCACCCGGCCCTGGGCAGCTGAGCATCAGCACAGAACCCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313386.9
ENST00000515098.5
CDS-3UTR TCA 90 bp TGCTGTTCCCGCGCGTCCCACACCGCATCTGACACAACACCACAGATCTCAGAGTCTGCACCGTATCTTTaGTCTTCCGGCAGCACTGCG +
Preference number: 4 (lower is better)
Translates to: CCSRASHTASDTTPQISESAPYL*SSGSTA
Trigger: CGCAGTGCTGCCGGAAGATCAAAGATACGGTGCAGA...CTCTGAGATCTGTGGTGTTGTGTCAGATGCGGTGTGGGACGCGCGGGAACAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512811.5
CDS-3UTR GCA 90 bp GACTATTTACAGTGGGAGATGGTACATACTGTTGAGGCTGTAGTGGGAGGAAGAGGTCCCCTGGAGGGCTaGGCTGGCCAGCTCAGCCCG +
Preference number: 4 (lower is better)
Translates to: DYLQWEMVHTVEAVVGGRGPLEG*AGQLSP
Trigger: CGGGCTGAGCTGGCCAGCGCAGCCCTCCAGGGGACC...TCTTCCTCCCACTACAGCCTCAACAGTATGTACCATCTCCCACTGTAAATAGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313386.9
ENST00000515098.5
CDS-3UTR GCA 90 bp ACTGAAGTTGACCACCCTACCGAGACAGACCAAGGCTCACAGGTGAAAACCCCTTGCAGGATCTGCTGCTaGTGTTCCCGCGCGTCCCAC +
Preference number: 4 (lower is better)
Translates to: TEVDHPTETDQGSQVKTPCRICC*CSRASH
Trigger: GTGGGACGCGCGGGAACAGCAGCAGCAGATCCTGCA...AGGGGTTTTCACCTGTGAGCCTTGGTCTGTCTCGGTAGGGTGGTCAACTTCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000313386.9
ENST00000515098.5
ENST00000542098.2
CDS-3UTR GCA 90 bp TGCTGCTGTTCCCGCGCGTCCCACACCGCATCTGACACAACACCACAGATCTCATCCACGATGGCCATCTaGAGGATCTGCTGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: CCCSRASHTASDTTPQISSTMAI*RICCCC
Trigger: ACAGCAGCAGCAGATCCTGCAGATGGCCATCGTGGA...TGAGATCTGTGGTGTTGTGTCAGATGCGGTGTGGGACGCGCGGGAACAGCAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512663.5
ENST00000512811.5
CDS-3UTR GCA 90 bp CTCTTGGGCCGAGGGGCAAGGGTGGACATAGCATTGGCATGGCAGCAAGAGACTTCCACGATGGCCATCTaGAGGATCTGCTGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: LLGRGARVDIALAWQQETSTMAI*RICCCC
Trigger: ACAGCAGCAGCAGATCCTGCAGATGGCCATCGTGGA...AGTCTCTTGCTGCCATGCCAATGCTATGTCCACCCTTGCCCCTCGGCCCAAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313386.9
ENST00000515098.5
ENST00000542098.2
CDS-3UTR GCA 90 bp GGCCGAGGGGCAAGGGTGGACATAGCATTGGCATGGCAGCAAGAGACTTGGCTGATGAAGTGCAGTCGGTaGAGCTTGAACTCCAGGGAG +
Preference number: 4 (lower is better)
Translates to: GRGARVDIALAWQQETWLMKCSR*SLNSRE
Trigger: CTCCCTGGAGTTCAAGCTGCACCGACTGCACTTCAT...CAGCCAAGTCTCTTGCTGCCATGCCAATGCTATGTCCACCCTTGCCCCTCGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313386.9
ENST00000515098.5
ENST00000542098.2
CDS-3UTR GCA 90 bp CTGAGGGCAGGGGTGGAAGGATGTCTACTGCTGAAGACCAAATCCCTTGCCACTCAGACCCCAGTGCACTaGCGCTGCTCAATCACAGCC +
Preference number: 4 (lower is better)
Translates to: LRAGVEGCLLLKTKSLATQTPVH*RCSITA
Trigger: GGCTGTGATTGAGCAGCGGCAGTGCACTGGGGTCTG...AGTGGCAAGGGATTTGGTCTTCAGCAGTAGACATCCTTCCACCCCTGCCCTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000313386.9
ENST00000515098.5
ENST00000542098.2
CDS-3UTR GCA 90 bp AGAGGGTTCTGTGCTGATGCTCAGCTGCCCAGGGCCGGGTGCTTTGGCTCAAGCGAAGACCAAATCCCTTaGCACTCTGTCGGTTGCTAC +
Preference number: 4 (lower is better)
Translates to: RGFCADAQLPRAGCFGSSEDQIP*HSVGCY
Trigger: GTAGCAACCGACAGAGTGGCAAGGGATTTGGTCTTC...GCTTGAGCCAAAGCACCCGGCCCTGGGCAGCTGAGCATCAGCACAGAACCCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313386.9
ENST00000515098.5
CDS-3UTR GCA 90 bp CCGAGGGGCAAGGGTGGACATAGCATTGGCATGGCAGCAAGAGACTTGGCTGAGCCCCGCAGTCAGGGATaGAAGTTGTGTTCTTCCTGC +
Preference number: 4 (lower is better)
Translates to: PRGKGGHSIGMAARDLAEPRSQG*KLCSSC
Trigger: GCAGGAAGAACACAACTTGCATCCCTGACTGCGGGG...CTCAGCCAAGTCTCTTGCTGCCATGCCAATGCTATGTCCACCCTTGCCCCTCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313386.9
ENST00000515098.5
CDS-3UTR CCA 90 bp AGAGGGGTCCCCTGGAGGGCCGGTTTCAAGGAGGCCTACAGATGCAGGTACCAAACAGGTGTTCCACGATaGCCATCTGCAGGATCTGCT +
Preference number: 4 (lower is better)
Translates to: RGVPWRAGFKEAYRCRYQTGVPR*PSAGSA
Trigger: AGCAGATCCTGCAGATGGCCATCGTGGAACACCTGT...TTGGTACCTGCATCTGTAGGCCTCCTTGAAACCGGCCCTCCAGGGGACCCCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512663.5
CDS-3UTR CCA 90 bp GCGCGTCCCACACCGCATCTGACACAACACCACAGATCTCAGAGTCGAAGTTCCTTCAGCGTTGATTCCTaGCACAGCTCCTCGGCCACG +
Preference number: 4 (lower is better)
Translates to: ARPTPHLTQHHRSQSRSSFSVDS*HSSSAT
Trigger: CGTGGCCGAGGAGCTGTGCCAGGAATCAACGCTGAA...GGAACTTCGACTCTGAGATCTGTGGTGTTGTGTCAGATGCGGTGTGGGACGCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512811.5
CDS-3UTR CCA 90 bp GACTTGGCTGAGGGCAGGGGTGGAAGGATGTCTACTGCTGAAGACCAAATCCCTTCTGCTGGCGGAGGATaGGGCAAGCGAACACGGAGT +
Preference number: 4 (lower is better)
Translates to: DLAEGRGGRMSTAEDQIPSAGGG*GKRTRS
Trigger: ACTCCGTGTTCGCTTGCCCCATCCTCCGCCAGCAGA...AGGGATTTGGTCTTCAGCAGTAGACATCCTTCCACCCCTGCCCTCAGCCAAGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313386.9
ENST00000515098.5
ENST00000542098.2
CDS-3UTR CCA 90 bp CCGAGGGGCAAGGGTGGACATAGCATTGGCATGGCAGCAAGAGACTTGGCTGAGCCGGGTTCTGCTCCATaGGACAGTAGGGACACTTCA +
Preference number: 4 (lower is better)
Translates to: PRGKGGHSIGMAARDLAEPGSAP*DSRDTS
Trigger: TGAAGTGTCCCTACTGTCCCATGGAGCAGAACCCGG...CTCAGCCAAGTCTCTTGCTGCCATGCCAATGCTATGTCCACCCTTGCCCCTCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313386.9
ENST00000515098.5
ENST00000542098.2
CDS-3UTR CCA 90 bp TCTGAAACCAACCACAGTCCACTGAAGTTGACCACCCTACCGAGACAGACCAAGACCGCTGGACACTCTTaGGCCGAGGGGCAAGGGTGG +
Preference number: 4 (lower is better)
Translates to: SETNHSPLKLTTLPRQTKTAGHS*AEGQGW
Trigger: CCACCCTTGCCCCTCGGCCCAAGAGTGTCCAGCGGT...CTTGGTCTGTCTCGGTAGGGTGGTCAACTTCAGTGGACTGTGGTTGGTTTCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313386.9
ENST00000515098.5
ENST00000542098.2
CDS-3UTR CCA 90 bp GAGGTGGGCCACCGCTGGACACTCTTGGGCCGAGGGGCAAGGGTGGACATAGCAGCATTCCGTTCTAACTaGGACTATTTACAGTGGGAG +
Preference number: 4 (lower is better)
Translates to: EVGHRWTLLGRGARVDIAAFRSN*DYLQWE
Trigger: CTCCCACTGTAAATAGTCCCAGTTAGAACGGAATGC...TGCTATGTCCACCCTTGCCCCTCGGCCCAAGAGTGTCCAGCGGTGGCCCACCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313386.9
ENST00000515098.5
ENST00000542098.2
CDS-3UTR CCA 90 bp GACTTGGCTGAGGGCAGGGGTGGAAGGATGTCTACTGCTGAAGACCAAATCCCTGTTGGGCCAGCGAGTTaGTGGGCGGGAAGAGTGAAG +
Preference number: 4 (lower is better)
Translates to: DLAEGRGGRMSTAEDQIPVGPAS*WAGRVK
Trigger: CTTCACTCTTCCCGCCCACCAACTCGCTGGCCCAAC...AGGGATTTGGTCTTCAGCAGTAGACATCCTTCCACCCCTGCCCTCAGCCAAGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313386.9
ENST00000515098.5
CDS-3UTR CCA 90 bp AGAGGGTTCTGTGCTGATGCTCAGCTGCCCAGGGCCGGGTGCTTTGGCTCAAGCAATAGAGGCTGGGGGTaGATCTTGGGTACCTACAGT +
Preference number: 4 (lower is better)
Translates to: RGFCADAQLPRAGCFGSSNRGWG*ILGTYS
Trigger: ACTGTAGGTACCCAAGATCCACCCCCAGCCTCTATT...GCTTGAGCCAAAGCACCCGGCCCTGGGCAGCTGAGCATCAGCACAGAACCCTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313386.9
ENST00000515098.5
3UTR CAA 72 bp GCCAGGCGCTCTGAAACCAACCACAGTCCACTGAAGTaGACCACCCTACCGAGACAGACCAAGGCTCACAGG +
Preference number: 4 (lower is better)
Translates to: ARRSETNHSPLK*TTLPRQTKAHR
Trigger: CCTGTGAGCCTTGGTCTGTCTCGGTAGGGTGGTCAACTTCAGTGGACTGTGGTTGGTTTCAGAGCGCCTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313386.9
ENST00000515098.5
ENST00000542098.2
CDS-3UTR TCA 90 bp TGCTGTTCCCGCGCGTCCCACACCGCATCTGACACAACACCACAGATCTCAGAGTCTGCACCGTATCTTTaGTCTTCCGGCAGCACTGTG +
Preference number: 4 (lower is better)
Translates to: CCSRASHTASDTTPQISESAPYL*SSGSTV
Trigger: CACAGTGCTGCCGGAAGATCAAAGATACGGTGCAGA...CTCTGAGATCTGTGGTGTTGTGTCAGATGCGGTGTGGGACGCGCGGGAACAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512663.5
CDS-3UTR TCA 90 bp CGCGCGTCCCACACCGCATCTGACACAACACCACAGATCTCAGAGTCGAAGTTCCTGAGCATGCCCTGCTaGTACAGGTGTTCCACGATG +
Preference number: 4 (lower is better)
Translates to: RASHTASDTTPQISESKFLSMPC*YRCSTM
Trigger: CATCGTGGAACACCTGTATCAGCAGGGCATGCTCAG...GAACTTCGACTCTGAGATCTGTGGTGTTGTGTCAGATGCGGTGTGGGACGCGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512663.5
ENST00000512811.5
CDS-3UTR TCA 90 bp TCTGAAACCAACCACAGTCCACTGAAGTTGACCACCCTACCGAGACAGACCAAGACTCCAGGGAGCTGTTaGGTTCCAGCAGGCGCTGCC +
Preference number: 4 (lower is better)
Translates to: SETNHSPLKLTTLPRQTKTPGSC*VPAGAA
Trigger: GGCAGCGCCTGCTGGAACTCAACAGCTCCCTGGAGT...CTTGGTCTGTCTCGGTAGGGTGGTCAACTTCAGTGGACTGTGGTTGGTTTCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313386.9
ENST00000515098.5
ENST00000542098.2
CDS-3UTR TCA 90 bp CTCTGCCAAAGGGCTGCTCCAGTGCTCCCCTCAGTGGAACTCCTCAGCCAGGCGACCAAGGCTCACAGGTaGAAACCCCTTTCAACAAAA +
Preference number: 4 (lower is better)
Translates to: LCQRAAPVLPSVELLSQATKAHR*KPLSTK
Trigger: TTTTGTTGAAAGGGGTTTTCACCTGTGAGCCTTGGT...CGCCTGGCTGAGGAGTTCCACTGAGGGGAGCACTGGAGCAGCCCTTTGGCAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000313386.9
ENST00000515098.5
ENST00000542098.2
CDS-3UTR TCA 90 bp GGCTGCTCCAGTGCTCCCCTCAGTGGAACTCCTCAGCCAGGCGCTCTGAAACCAAAGGATGTCTACTGCTaGAGACCAAATCCCTTGCCA +
Preference number: 4 (lower is better)
Translates to: GCSSAPLSGTPQPGALKPKDVYC*RPNPLP
Trigger: TGGCAAGGGATTTGGTCTTCAGCAGTAGACATCCTT...TGGTTTCAGAGCGCCTGGCTGAGGAGTTCCACTGAGGGGAGCACTGGAGCAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313386.9
ENST00000515098.5
ENST00000542098.2
CDS-3UTR GCA 90 bp TGCTGCTGTTCCCGCGCGTCCCACACCGCATCTGACACAACACCACAGATCTCATCCTGTCAATGGCTTTaGCCACTCGGGATACACTGC +
Preference number: 4 (lower is better)
Translates to: CCCSRASHTASDTTPQISSCQWL*PLGIHC
Trigger: GCAGTGTATCCCGAGTGGGCAAAGCCATTGACAGGA...TGAGATCTGTGGTGTTGTGTCAGATGCGGTGTGGGACGCGCGGGAACAGCAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512663.5
ENST00000512811.5
CDS-3UTR GCA 90 bp TCTGAAACCAACCACAGTCCACTGAAGTTGACCACCCTACCGAGACAGACCAAGTGCAGGATCTGCTGCTaGTGTTCCCGCGCGTCCCAC +
Preference number: 4 (lower is better)
Translates to: SETNHSPLKLTTLPRQTKCRICC*CSRASH
Trigger: GTGGGACGCGCGGGAACAGCAGCAGCAGATCCTGCA...CTTGGTCTGTCTCGGTAGGGTGGTCAACTTCAGTGGACTGTGGTTGGTTTCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313386.9
ENST00000515098.5
ENST00000542098.2
CDS-3UTR GCA 90 bp TCTGTGGGTGTTTTCTTAAGCAGCAGCTGCTGGTTGGGCCAGCGAGTTGGTGGGCCCAGGTCTTGTTCGTaGAGGGCTTCCAGGATTCGA +
Preference number: 4 (lower is better)
Translates to: SVGVFLSSSCWLGQRVGGPRSCS*RASRIR
Trigger: TCGAATCCTGGAAGCCCTGCACGAACAAGACCTGGG...CCCACCAACTCGCTGGCCCAACCAGCAGCTGCTGCTTAAGAAAACACCCACAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313386.9
ENST00000515098.5
CDS-3UTR GCA 90 bp GACTTGGCTGAGGGCAGGGGTGGAAGGATGTCTACTGCTGAAGACCAAATCCCTGATGCGTTTCCCATCTaGCGGGTTCTGCTCCATGGG +
Preference number: 4 (lower is better)
Translates to: DLAEGRGGRMSTAEDQIPDAFPI*RVLLHG
Trigger: CCCATGGAGCAGAACCCGGCAGATGGGAAACGCATC...AGGGATTTGGTCTTCAGCAGTAGACATCCTTCCACCCCTGCCCTCAGCCAAGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313386.9
ENST00000515098.5
ENST00000542098.2
CDS-3UTR GCA 90 bp GGCCGAGGGGCAAGGGTGGACATAGCATTGGCATGGCAGCAAGAGACTTGGCTGGAAGACCAAATCCCTTaGCACTCTGTCGGTTGCTAC +
Preference number: 4 (lower is better)
Translates to: GRGARVDIALAWQQETWLEDQIP*HSVGCY
Trigger: GTAGCAACCGACAGAGTGGCAAGGGATTTGGTCTTC...CAGCCAAGTCTCTTGCTGCCATGCCAATGCTATGTCCACCCTTGCCCCTCGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313386.9
ENST00000515098.5
ENST00000542098.2
CDS-3UTR GCA 90 bp TGCCAAAGGGCTGCTCCAGTGCTCCCCTCAGTGGAACTCCTCAGCCAGGCGCTCTGGACACTGGATACCTaGTGGCCATGTTTTTGTTTG +
Preference number: 4 (lower is better)
Translates to: CQRAAPVLPSVELLSQALWTLDT*WPCFCL
Trigger: CAAACAAAAACATGGCCAGCAGGTATCCAGTGTCCA...GAGCGCCTGGCTGAGGAGTTCCACTGAGGGGAGCACTGGAGCAGCCCTTTGGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313386.9
ENST00000515098.5
CDS-3UTR GCA 90 bp TCTGAAACCAACCACAGTCCACTGAAGTTGACCACCCTACCGAGACAGACCAAGCTTGGGGCCCCTTCCTaGTGTCAGAGGCCCTGCACA +
Preference number: 4 (lower is better)
Translates to: SETNHSPLKLTTLPRQTKLGAPS*CQRPCT
Trigger: TGTGCAGGGCCTCTGACAGCAGGAAGGGGCCCCAAG...CTTGGTCTGTCTCGGTAGGGTGGTCAACTTCAGTGGACTGTGGTTGGTTTCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313386.9
ENST00000515098.5
CDS-3UTR GCA 90 bp TTCTGCACCGTATCTTTGATCTTCCGGCAGCACTGTGACATCACCAGAGAGAGGCTGTCGCAGGGCACTTaGAAGGGTGGCCACCCACCT +
Preference number: 4 (lower is better)
Translates to: FCTVSLIFRQHCDITRERLSQGT*KGGHPP
Trigger: AGGTGGGTGGCCACCCTTGCAAGTGCCCTGCGACAG...CCTCTCTCTGGTGATGTCACAGTGCTGCCGGAAGATCAAAGATACGGTGCAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512663.5
CDS-3UTR CCA 90 bp CTGCTGATACAGGTGTTCCACGATGGCCATCTGCAGGATCTGCTGCTGCTGTTCCGGTCGCACGAGGACTaGACGTTTGAGTCCGAGCAA +
Preference number: 4 (lower is better)
Translates to: LLIQVFHDGHLQDLLLLFRSHED*TFESEQ
Trigger: TTGCTCGGACTCAAACGTCCAGTCCTCGTGCGACCG...GAACAGCAGCAGCAGATCCTGCAGATGGCCATCGTGGAACACCTGTATCAGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512663.5
CDS-3UTR CCA 90 bp TCTCCCTTTCCTTATGCCATGGAGCCAGGTGCCAGGCGTGGGCTGGTCCATCTCCGAAGTTCCTGTCAATaGCTTTGCCCACTCGGGATA +
Preference number: 4 (lower is better)
Translates to: SPFPYAMEPGARRGLVHLRSSCQ*LCPLGI
Trigger: TATCCCGAGTGGGCAAAGCCATTGACAGGAACTTCG...GAGATGGACCAGCCCACGCCTGGCACCTGGCTCCATGGCATAAGGAAAGGGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313386.9
ENST00000515098.5
ENST00000542098.2
CDS-3UTR CCA 90 bp AGACCCACTTCATGGAAGCCTAAAGCCCCCACATCAGGAACACCCCCATTCCTATCTGCTGGCGGAGGATaGGGCAAGCGAACACGGAGT +
Preference number: 4 (lower is better)
Translates to: RPTSWKPKAPTSGTPPFLSAGGG*GKRTRS
Trigger: ACTCCGTGTTCGCTTGCCCCATCCTCCGCCAGCAGA...TAGGAATGGGGGTGTTCCTGATGTGGGGGCTTTAGGCTTCCATGAAGTGGGTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000313386.9
ENST00000515098.5
CDS-3UTR CCA 90 bp CTCTGCCAAAGGGCTGCTCCAGTGCTCCCCTCAGTGGAACTCCTCAGCCAGGCGGCATTCCGTTCTAACTaGGACTATTTACAGTGGGAG +
Preference number: 4 (lower is better)
Translates to: LCQRAAPVLPSVELLSQAAFRSN*DYLQWE
Trigger: CTCCCACTGTAAATAGTCCCAGTTAGAACGGAATGC...CGCCTGGCTGAGGAGTTCCACTGAGGGGAGCACTGGAGCAGCCCTTTGGCAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313386.9
ENST00000515098.5
ENST00000542098.2
CDS-3UTR CCA 90 bp GAAGGATGTCTACTGCTGAAGACCAAATCCCTTGCCACTCTGTCGGTTGCTACTGCAGCAGCTGCTGGTTaGGCCAGCGAGTTGGTGGGC +
Preference number: 4 (lower is better)
Translates to: EGCLLLKTKSLATLSVATAAAAG*ASELVG
Trigger: GCCCACCAACTCGCTGGCCCAACCAGCAGCTGCTGC...AGTAGCAACCGACAGAGTGGCAAGGGATTTGGTCTTCAGCAGTAGACATCCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313386.9
ENST00000515098.5
CDS-3UTR CCA 90 bp GTAGTGGGAGGAAGAGGTGGGCCACCGCTGGACACTCTTGGGCCGAGGGGCAAGAAGGAACTTACCGTTTaGCCTGATGGTAAGAACCAA +
Preference number: 4 (lower is better)
Translates to: VVGGRGGPPLDTLGPRGKKELTV*PDGKNQ
Trigger: TTGGTTCTTACCATCAGGCCAAACGGTAAGTTCCTT...CTTGCCCCTCGGCCCAAGAGTGTCCAGCGGTGGCCCACCTCTTCCTCCCACTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313386.9
ENST00000515098.5
CDS-3UTR CCA 90 bp CTTGGGCCGAGGGGCAAGGGTGGACATAGCATTGGCATGGCAGCAAGAGACTTGGTAGTCCCAGCCACTTaGGAGGCTAAAGCAGGAGAT +
Preference number: 4 (lower is better)
Translates to: LGPRGKGGHSIGMAARDLVVPAT*EAKAGD
Trigger: ATCTCCTGCTTTAGCCTCCCAAGTGGCTGGGACTAC...CAAGTCTCTTGCTGCCATGCCAATGCTATGTCCACCCTTGCCCCTCGGCCCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313386.9
ENST00000515098.5
CDS-3UTR TCA 90 bp GCTGTTCCCGCGCGTCCCACACCGCATCTGACACAACACCACAGATCTCAGAGTCGGGATACACTGCTGTaGATGTCCTTATGGTCCGAA +
Preference number: 4 (lower is better)
Translates to: AVPARPTPHLTQHHRSQSRDTLL*MSLWSE
Trigger: TTCGGACCATAAGGACATTCACAGCAGTGTATCCCG...ACTCTGAGATCTGTGGTGTTGTGTCAGATGCGGTGTGGGACGCGCGGGAACAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512663.5
ENST00000512811.5
CDS-3UTR TCA 90 bp GGATGTCTACTGCTGAAGACCAAATCCCTTGCCACTCTGTCGGTTGCTACTAAGGCTCCTCGGCCACGCTaGGCATGCCCTGCTGATACA +
Preference number: 4 (lower is better)
Translates to: GCLLLKTKSLATLSVATKAPRPR*ACPADT
Trigger: TGTATCAGCAGGGCATGCTCAGCGTGGCCGAGGAGC...CTTAGTAGCAACCGACAGAGTGGCAAGGGATTTGGTCTTCAGCAGTAGACATCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313386.9
ENST00000515098.5
ENST00000542098.2
CDS-3UTR TCA 90 bp GGATGTCTACTGCTGAAGACCAAATCCCTTGCCACTCTGTCGGTTGCTACTAAGACTCCAGGGAGCTGTTaGGTTCCAGCAGGCGCTGCC +
Preference number: 4 (lower is better)
Translates to: GCLLLKTKSLATLSVATKTPGSC*VPAGAA
Trigger: GGCAGCGCCTGCTGGAACTCAACAGCTCCCTGGAGT...CTTAGTAGCAACCGACAGAGTGGCAAGGGATTTGGTCTTCAGCAGTAGACATCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313386.9
ENST00000515098.5
ENST00000542098.2
CDS-3UTR TCA 90 bp CTGAGGGCAGGGGTGGAAGGATGTCTACTGCTGAAGACCAAATCCCTTGCCACTGGTAACTCGTCCTTGTaGTTCCAGACCCCAGTGCAC +
Preference number: 4 (lower is better)
Translates to: LRAGVEGCLLLKTKSLATGNSSL*FQTPVH
Trigger: GTGCACTGGGGTCTGGAATCACAAGGACGAGTTACC...AGTGGCAAGGGATTTGGTCTTCAGCAGTAGACATCCTTCCACCCCTGCCCTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000313386.9
ENST00000515098.5
ENST00000542098.2
CDS-3UTR TCA 90 bp GGCCGAGGGGCAAGGGTGGACATAGCATTGGCATGGCAGCAAGAGACTTGGCTGAAGGATGTCTACTGCTaGAGACCAAATCCCTTGCCA +
Preference number: 4 (lower is better)
Translates to: GRGARVDIALAWQQETWLKDVYC*RPNPLP
Trigger: TGGCAAGGGATTTGGTCTTCAGCAGTAGACATCCTT...CAGCCAAGTCTCTTGCTGCCATGCCAATGCTATGTCCACCCTTGCCCCTCGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313386.9
ENST00000515098.5
ENST00000542098.2
CDS-3UTR TCA 90 bp CTTGGGCCGAGGGGCAAGGGTGGACATAGCATTGGCATGGCAGCAAGAGACTTGTGCTTTGGCTCAAGCTaGGAACTGATCCTGCTGCTA +
Preference number: 4 (lower is better)
Translates to: LGPRGKGGHSIGMAARDLCFGSS*ELILLL
Trigger: TAGCAGCAGGATCAGTTCTCAGCTTGAGCCAAAGCA...CAAGTCTCTTGCTGCCATGCCAATGCTATGTCCACCCTTGCCCCTCGGCCCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313386.9
ENST00000515098.5
CDS-3UTR TCA 90 bp CCGAGGGGCAAGGGTGGACATAGCATTGGCATGGCAGCAAGAGACTTGGCTGAGAGTTCAAGGCTGCAGTaGGCCATGATCATACACCAC +
Preference number: 4 (lower is better)
Translates to: PRGKGGHSIGMAARDLAESSRLQ*AMIIHH
Trigger: GTGGTGTATGATCATGGCTCACTGCAGCCTTGAACT...CTCAGCCAAGTCTCTTGCTGCCATGCCAATGCTATGTCCACCCTTGCCCCTCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313386.9
ENST00000515098.5
CDS-3UTR GCA 90 bp GCACAGCTCCTCGGCCACGCTGAGCATGCCCTGCTGATACAGGTGTTCCACGATCCACTCGGGATACACTaGTGTGAATGTCCTTATGGT +
Preference number: 4 (lower is better)
Translates to: AQLLGHAEHALLIQVFHDPLGIH*CECPYG
Trigger: ACCATAAGGACATTCACAGCAGTGTATCCCGAGTGG...ATCGTGGAACACCTGTATCAGCAGGGCATGCTCAGCGTGGCCGAGGAGCTGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512811.5
CDS-3UTR GCA 90 bp GCGCGTCCCACACCGCATCTGACACAACACCACAGATCTCAGAGTCGAAGTTCCTCCTGTCAATGGCTTTaGCCACTCGGGATACACTGC +
Preference number: 4 (lower is better)
Translates to: ARPTPHLTQHHRSQSRSSSCQWL*PLGIHC
Trigger: GCAGTGTATCCCGAGTGGGCAAAGCCATTGACAGGA...GGAACTTCGACTCTGAGATCTGTGGTGTTGTGTCAGATGCGGTGTGGGACGCGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512663.5
ENST00000512811.5
CDS-3UTR GCA 90 bp CAGTGGAACTCCTCAGCCAGGCGCTCTGAAACCAACCACAGTCCACTGAAGTTGCCCAGGTCTTGTTCGTaGAGGGCTTCCAGGATTCGA +
Preference number: 4 (lower is better)
Translates to: QWNSSARRSETNHSPLKLPRSCS*RASRIR
Trigger: TCGAATCCTGGAAGCCCTGCACGAACAAGACCTGGG...CAACTTCAGTGGACTGTGGTTGGTTTCAGAGCGCCTGGCTGAGGAGTTCCACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313386.9
ENST00000515098.5
ENST00000542098.2
CDS-3UTR GCA 90 bp GAAGGATGTCTACTGCTGAAGACCAAATCCCTTGCCACTCTGTCGGTTGCTACTAGTTCCAGCAGGCGCTaGCTGTGGGAGACGGCCCAT +
Preference number: 4 (lower is better)
Translates to: EGCLLLKTKSLATLSVATSSSRR*LWETAH
Trigger: ATGGGCCGTCTCCCACAGGCAGCGCCTGCTGGAACT...AGTAGCAACCGACAGAGTGGCAAGGGATTTGGTCTTCAGCAGTAGACATCCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313386.9
ENST00000515098.5
ENST00000542098.2
CDS-3UTR GCA 90 bp CAGTGGAACTCCTCAGCCAGGCGCTCTGAAACCAACCACAGTCCACTGAAGTTGGATTCCAGACCCCAGTaGACTGCCGCTGCTCAATCA +
Preference number: 4 (lower is better)
Translates to: QWNSSARRSETNHSPLKLDSRPQ*TAAAQS
Trigger: TGATTGAGCAGCGGCAGTGCACTGGGGTCTGGAATC...CAACTTCAGTGGACTGTGGTTGGTTTCAGAGCGCCTGGCTGAGGAGTTCCACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313386.9
ENST00000515098.5
ENST00000542098.2
CDS-3UTR GCA 90 bp AAGCTCCCCGCAGTCAGGGATGCAAGTTGTGTTCTTCCTGCCTGGACACTGGATTTGGAATCTGACGTCTaGTGGCGGAGGATGGGGCAA +
Preference number: 4 (lower is better)
Translates to: KLPAVRDASCVLPAWTLDLESDV*WRRMGQ
Trigger: TTGCCCCATCCTCCGCCAGCAGACGTCAGATTCCAA...ATCCAGTGTCCAGGCAGGAAGAACACAACTTGCATCCCTGACTGCGGGGAGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313386.9
ENST00000515098.5
CDS-3UTR GCA 90 bp TCTGAAACCAACCACAGTCCACTGAAGTTGACCACCCTACCGAGACAGACCAAGCCTCTGCCAAAGGGCTaGTCCAGTGCTCCCCTCAGT +
Preference number: 4 (lower is better)
Translates to: SETNHSPLKLTTLPRQTKPLPKG*SSAPLS
Trigger: ACTGAGGGGAGCACTGGAGCAGCCCTTTGGCAGAGG...CTTGGTCTGTCTCGGTAGGGTGGTCAACTTCAGTGGACTGTGGTTGGTTTCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313386.9
ENST00000515098.5
ENST00000542098.2
CDS-3UTR GCA 90 bp CCGAGGGGCAAGGGTGGACATAGCATTGGCATGGCAGCAAGAGACTTGGCTGAGTGCTGTCAGAGGCCCTaGACAGGACTCAGTATACAT +
Preference number: 4 (lower is better)
Translates to: PRGKGGHSIGMAARDLAECCQRP*TGLSIH
Trigger: ATGTATACTGAGTCCTGTGCAGGGCCTCTGACAGCA...CTCAGCCAAGTCTCTTGCTGCCATGCCAATGCTATGTCCACCCTTGCCCCTCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313386.9
ENST00000515098.5
CDS-3UTR GCA 90 bp CTCTTGGGCCGAGGGGCAAGGGTGGACATAGCATTGGCATGGCAGCAAGAGACTTGCTGTCAGAGGCCCTaGACAGGACTCAGTATACAT +
Preference number: 4 (lower is better)
Translates to: LLGRGARVDIALAWQQETCCQRP*TGLSIH
Trigger: ATGTATACTGAGTCCTGTGCAGGGCCTCTGACAGCA...AGTCTCTTGCTGCCATGCCAATGCTATGTCCACCCTTGCCCCTCGGCCCAAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313386.9
ENST00000515098.5
CDS-3UTR GCA 90 bp GTAGTGGGAGGAAGAGGTGGGCCACCGCTGGACACTCTTGGGCCGAGGGGCAAGAATATGAAGCTAAAATaGATTCCCCCGAGCTCTCTT +
Preference number: 4 (lower is better)
Translates to: VVGGRGGPPLDTLGPRGKNMKLK*IPPSSL
Trigger: AAGAGAGCTCGGGGGAATGCATTTTAGCTTCATATT...CTTGCCCCTCGGCCCAAGAGTGTCCAGCGGTGGCCCACCTCTTCCTCCCACTAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000313386.9
ENST00000515098.5
CDS-3UTR GCA 90 bp TCTCCCTTTCCTTATGCCATGGAGCCAGGTGCCAGGCGTGGGCTGGTCCATCTCTGTGTGGCTGGACCATaGCTTCAAAGTCTGATTGAG +
Preference number: 4 (lower is better)
Translates to: SPFPYAMEPGARRGLVHLCVAGP*LQSLIE
Trigger: CTCAATCAGACTTTGAAGGCATGGTCCAGCCACACA...GAGATGGACCAGCCCACGCCTGGCACCTGGCTCCATGGCATAAGGAAAGGGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313386.9
ENST00000515098.5
CDS-3UTR CCA 90 bp GTGAATGTCCTTATGGTCCGAAGCCAGTTTCTGCACCGTATCTTTGATCTTCCGCGGCTCTTCGGGGGCTaGGCCGGGACCTATGAGTCT +
Preference number: 4 (lower is better)
Translates to: VNVLMVRSQFLHRIFDLPRLFGG*AGTYES
Trigger: AGACTCATAGGTCCCGGCCCAGCCCCCGAAGAGCCG...CGGAAGATCAAAGATACGGTGCAGAAACTGGCTTCGGACCATAAGGACATTCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512663.5
CDS-3UTR CCA 90 bp CCTTTCATAGTTGCCATGTGGGAATGTAGGCCCTGTGTGGCTGGACCATGCCTTCGGTCGCACGAGGACTaGACGTTTGAGTCCGAGCAA +
Preference number: 4 (lower is better)
Translates to: PFIVAMWECRPCVAGPCLRSHED*TFESEQ
Trigger: TTGCTCGGACTCAAACGTCCAGTCCTCGTGCGACCG...AAGGCATGGTCCAGCCACACAGGGCCTACATTCCCACATGGCAACTATGAAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313386.9
ENST00000515098.5
CDS-3UTR CCA 90 bp GTTCCCGCGCGTCCCACACCGCATCTGACACAACACCACAGATCTCAGAGTCGACGAAGTTCCTGTCAATaGCTTTGCCCACTCGGGATA +
Preference number: 4 (lower is better)
Translates to: VPARPTPHLTQHHRSQSRRSSCQ*LCPLGI
Trigger: TATCCCGAGTGGGCAAAGCCATTGACAGGAACTTCG...TCGACTCTGAGATCTGTGGTGTTGTGTCAGATGCGGTGTGGGACGCGCGGGAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512663.5
ENST00000512811.5
CDS-3UTR CCA 90 bp TGCTCCCCTCAGTGGAACTCCTCAGCCAGGCGCTCTGAAACCAACCACAGTCCACGAAGTTCCTGTCAATaGCTTTGCCCACTCGGGATA +
Preference number: 4 (lower is better)
Translates to: CSPQWNSSARRSETNHSPRSSCQ*LCPLGI
Trigger: TATCCCGAGTGGGCAAAGCCATTGACAGGAACTTCG...TGGACTGTGGTTGGTTTCAGAGCGCCTGGCTGAGGAGTTCCACTGAGGGGAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313386.9
ENST00000515098.5
ENST00000542098.2
CDS-3UTR CCA 90 bp GTGGAAGGATGTCTACTGCTGAAGACCAAATCCCTTGCCACTCTGTCGGTTGCTCTGCCCATCATCACCTaGATCTCCCGCTGGTGCAGC +
Preference number: 4 (lower is better)
Translates to: VEGCLLLKTKSLATLSVALPIIT*ISRWCS
Trigger: GCTGCACCAGCGGGAGATCCAGGTGATGATGGGCAG...AGCAACCGACAGAGTGGCAAGGGATTTGGTCTTCAGCAGTAGACATCCTTCCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313386.9
ENST00000515098.5
ENST00000542098.2
CDS-3UTR CCA 90 bp CCAAATCCCTTGCCACTCTGTCGGTTGCTACTAAGTCAAACGCAAACAGAAACAGCCAGGTGCCAGGCGTaGGCTGGTCCATCTCCCTCC +
Preference number: 4 (lower is better)
Translates to: PNPLPLCRLLLSQTQTETARCQA*AGPSPS
Trigger: GGAGGGAGATGGACCAGCCCACGCCTGGCACCTGGC...TGTTTCTGTTTGCGTTTGACTTAGTAGCAACCGACAGAGTGGCAAGGGATTTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313386.9
ENST00000515098.5
ENST00000542098.2
CDS-3UTR CCA 90 bp CCGAGGGGCAAGGGTGGACATAGCATTGGCATGGCAGCAAGAGACTTGGCTGAGGCTGGGGGTGGATCTTaGGTACCTACAGTATCACTT +
Preference number: 4 (lower is better)
Translates to: PRGKGGHSIGMAARDLAEAGGGS*VPTVSL
Trigger: AAGTGATACTGTAGGTACCCAAGATCCACCCCCAGC...CTCAGCCAAGTCTCTTGCTGCCATGCCAATGCTATGTCCACCCTTGCCCCTCGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313386.9
ENST00000515098.5
CDS-3UTR CCA 90 bp TCTGTGGGTGTTTTCTTAAGCAGCAGCTGCTGGTTGGGCCAGCGAGTTGGTGGGGTAGTCCCAGCCACTTaGGAGGCTAAAGCAGGAGAT +
Preference number: 4 (lower is better)
Translates to: SVGVFLSSSCWLGQRVGGVVPAT*EAKAGD
Trigger: ATCTCCTGCTTTAGCCTCCCAAGTGGCTGGGACTAC...CCCACCAACTCGCTGGCCCAACCAGCAGCTGCTGCTTAAGAAAACACCCACAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313386.9
ENST00000515098.5
CDS-3UTR TCA 90 bp GTTGACCACCCTACCGAGACAGACCAAGGCTCACAGGTGAAAACCCCTTTCAACCTGAGCATGCCCTGCTaGTACAGGTGTTCCACGATG +
Preference number: 4 (lower is better)
Translates to: VDHPTETDQGSQVKTPFNLSMPC*YRCSTM
Trigger: CATCGTGGAACACCTGTATCAGCAGGGCATGCTCAG...GTTGAAAGGGGTTTTCACCTGTGAGCCTTGGTCTGTCTCGGTAGGGTGGTCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000313386.9
ENST00000515098.5
ENST00000542098.2
CDS-3UTR TCA 90 bp TGCAGGGCTTCCAGGATTCGATTCAACTCTAGGAAAGGCTGCTTGAAATCCAAGGCTCCTCGGCCACGCTaGGCATGCCCTGCTGATACA +
Preference number: 4 (lower is better)
Translates to: CRASRIRFNSRKGCLKSKAPRPR*ACPADT
Trigger: TGTATCAGCAGGGCATGCTCAGCGTGGCCGAGGAGC...CTTGGATTTCAAGCAGCCTTTCCTAGAGTTGAATCGAATCCTGGAAGCCCTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512811.5
CDS-3UTR TCA 90 bp CTTGGGCCGAGGGGCAAGGGTGGACATAGCATTGGCATGGCAGCAAGAGACTTGGCTCAATCACAGCCTTaGTGTTCATCAACACAGGCA +
Preference number: 4 (lower is better)
Translates to: LGPRGKGGHSIGMAARDLAQSQP*CSSTQA
Trigger: TGCCTGTGTTGATGAACATCAAGGCTGTGATTGAGC...CAAGTCTCTTGCTGCCATGCCAATGCTATGTCCACCCTTGCCCCTCGGCCCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313386.9
ENST00000515098.5
ENST00000542098.2
CDS-3UTR TCA 90 bp GTTGACCACCCTACCGAGACAGACCAAGGCTCACAGGTGAAAACCCCTTTCAACGGTAACTCGTCCTTGTaGTTCCAGACCCCAGTGCAC +
Preference number: 4 (lower is better)
Translates to: VDHPTETDQGSQVKTPFNGNSSL*FQTPVH
Trigger: GTGCACTGGGGTCTGGAATCACAAGGACGAGTTACC...GTTGAAAGGGGTTTTCACCTGTGAGCCTTGGTCTGTCTCGGTAGGGTGGTCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000313386.9
ENST00000515098.5
ENST00000542098.2
CDS-3UTR TCA 90 bp TGCTCCCCTCAGTGGAACTCCTCAGCCAGGCGCTCTGAAACCAACCACAGTCCAGTAGGAATCAGAATATaGTGCGTTTCCCATCTGCCG +
Preference number: 4 (lower is better)
Translates to: CSPQWNSSARRSETNHSPVGIRI*CVSHLP
Trigger: CGGCAGATGGGAAACGCATCATATTCTGATTCCTAC...TGGACTGTGGTTGGTTTCAGAGCGCCTGGCTGAGGAGTTCCACTGAGGGGAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313386.9
ENST00000515098.5
ENST00000542098.2
CDS-3UTR TCA 90 bp AGACCCACTTCATGGAAGCCTAAAGCCCCCACATCAGGAACACCCCCATTCCTAGCTCAAGCTGAGAACTaGTCCTGCTGCTATCCCAGC +
Preference number: 4 (lower is better)
Translates to: RPTSWKPKAPTSGTPPFLAQAEN*SCCYPS
Trigger: GCTGGGATAGCAGCAGGATCAGTTCTCAGCTTGAGC...TAGGAATGGGGGTGTTCCTGATGTGGGGGCTTTAGGCTTCCATGAAGTGGGTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000313386.9
ENST00000515098.5
CDS-3UTR GCA 90 bp CTGAGGGCAGGGGTGGAAGGATGTCTACTGCTGAAGACCAAATCCCTTGCCACTAAGAGGCGGATGAAGTaGAGTCGGTGCAGCTTGAAC +
Preference number: 4 (lower is better)
Translates to: LRAGVEGCLLLKTKSLATKRRMK*SRCSLN
Trigger: GTTCAAGCTGCACCGACTGCACTTCATCCGCCTCTT...AGTGGCAAGGGATTTGGTCTTCAGCAGTAGACATCCTTCCACCCCTGCCCTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313386.9
ENST00000515098.5
ENST00000542098.2
CDS-3UTR GCA 90 bp ACTGAAGTTGACCACCCTACCGAGACAGACCAAGGCTCACAGGTGAAAACCCCTGATTCCAGACCCCAGTaGACTGCCGCTGCTCAATCA +
Preference number: 4 (lower is better)
Translates to: TEVDHPTETDQGSQVKTPDSRPQ*TAAAQS
Trigger: TGATTGAGCAGCGGCAGTGCACTGGGGTCTGGAATC...AGGGGTTTTCACCTGTGAGCCTTGGTCTGTCTCGGTAGGGTGGTCAACTTCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000313386.9
ENST00000515098.5
ENST00000542098.2
CDS-3UTR GCA 90 bp GTTGACCACCCTACCGAGACAGACCAAGGCTCACAGGTGAAAACCCCTTTCAACTTGGAATCTGACGTCTaGTGGCGGAGGATGGGGCAA +
Preference number: 4 (lower is better)
Translates to: VDHPTETDQGSQVKTPFNLESDV*WRRMGQ
Trigger: TTGCCCCATCCTCCGCCAGCAGACGTCAGATTCCAA...GTTGAAAGGGGTTTTCACCTGTGAGCCTTGGTCTGTCTCGGTAGGGTGGTCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000313386.9
ENST00000515098.5
ENST00000542098.2
CDS-3UTR GCA 90 bp GCCAAAGGGCTGCTCCAGTGCTCCCCTCAGTGGAACTCCTCAGCCAGGCGCTCTAATGAGCTTATTGAGTaGATCTCGGGAGATAACATG +
Preference number: 4 (lower is better)
Translates to: AKGLLQCSPQWNSSARRSNELIE*ISGDNM
Trigger: CATGTTATCTCCCGAGATGCACTCAATAAGCTCATT...AGAGCGCCTGGCTGAGGAGTTCCACTGAGGGGAGCACTGGAGCAGCCCTTTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313386.9
ENST00000515098.5
ENST00000542098.2
CDS-3UTR GCA 90 bp GTGGAAGGATGTCTACTGCTGAAGACCAAATCCCTTGCCACTCTGTCGGTTGCTGGCCATGTTTTTGTTTaGGGCAGCCACCAGGCCGTG +
Preference number: 4 (lower is better)
Translates to: VEGCLLLKTKSLATLSVAGHVFV*GSHQAV
Trigger: CACGGCCTGGTGGCTGCCGCAAACAAAAACATGGCC...AGCAACCGACAGAGTGGCAAGGGATTTGGTCTTCAGCAGTAGACATCCTTCCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313386.9
ENST00000515098.5
CDS-3UTR GCA 90 bp CACTGGATACCTGCTGGCCATGTTTTTGTTTGCGGCAGCCACCAGGCCGTGCCCTGGACACTGGATACCTaGTGGCCATGTTTTTGTTTG +
Preference number: 4 (lower is better)
Translates to: HWIPAGHVFVCGSHQAVPWTLDT*WPCFCL
Trigger: CAAACAAAAACATGGCCAGCAGGTATCCAGTGTCCA...GGGCACGGCCTGGTGGCTGCCGCAAACAAAAACATGGCCAGCAGGTATCCAGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000313386.9
ENST00000515098.5
CDS-3UTR GCA 90 bp TGCTCCCCTCAGTGGAACTCCTCAGCCAGGCGCTCTGAAACCAACCACAGTCCAAAGTTGTGTTCTTCCTaGCTGGACACTGGATACCTG +
Preference number: 4 (lower is better)
Translates to: CSPQWNSSARRSETNHSPKLCSS*LDTGYL
Trigger: CAGGTATCCAGTGTCCAGGCAGGAAGAACACAACTT...TGGACTGTGGTTGGTTTCAGAGCGCCTGGCTGAGGAGTTCCACTGAGGGGAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313386.9
ENST00000515098.5
CDS-3UTR GCA 90 bp CTTGGGCCGAGGGGCAAGGGTGGACATAGCATTGGCATGGCAGCAAGAGACTTGCCCAGGAGCCTTAAATaGCACTGTGAAGCTTATGGA +
Preference number: 4 (lower is better)
Translates to: LGPRGKGGHSIGMAARDLPRSLK*HCEAYG
Trigger: TCCATAAGCTTCACAGTGGCATTTAAGGCTCCTGGG...CAAGTCTCTTGCTGCCATGCCAATGCTATGTCCACCCTTGCCCCTCGGCCCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313386.9
ENST00000515098.5
CDS-3UTR GCA 90 bp TGCTCCCCTCAGTGGAACTCCTCAGCCAGGCGCTCTGAAACCAACCACAGTCCACCCAGGAGCCTTAAATaGCACTGTGAAGCTTATGGA +
Preference number: 4 (lower is better)
Translates to: CSPQWNSSARRSETNHSPPRSLK*HCEAYG
Trigger: TCCATAAGCTTCACAGTGGCATTTAAGGCTCCTGGG...TGGACTGTGGTTGGTTTCAGAGCGCCTGGCTGAGGAGTTCCACTGAGGGGAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313386.9
ENST00000515098.5
CDS-3UTR CCA 90 bp CAGTGGAACTCCTCAGCCAGGCGCTCTGAAACCAACCACAGTCCACTGAAGTTGCAAGCGAACACGGAGTaGTACCAGCACTTCATGCCT +
Preference number: 4 (lower is better)
Translates to: QWNSSARRSETNHSPLKLQANTE*YQHFMP
Trigger: AGGCATGAAGTGCTGGTACCACTCCGTGTTCGCTTG...CAACTTCAGTGGACTGTGGTTGGTTTCAGAGCGCCTGGCTGAGGAGTTCCACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313386.9
ENST00000515098.5
ENST00000542098.2
CDS-3UTR CCA 90 bp ACTGAAGTTGACCACCCTACCGAGACAGACCAAGGCTCACAGGTGAAAACCCCTCCGGGTTCTGCTCCATaGGACAGTAGGGACACTTCA +
Preference number: 4 (lower is better)
Translates to: TEVDHPTETDQGSQVKTPPGSAP*DSRDTS
Trigger: TGAAGTGTCCCTACTGTCCCATGGAGCAGAACCCGG...AGGGGTTTTCACCTGTGAGCCTTGGTCTGTCTCGGTAGGGTGGTCAACTTCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000313386.9
ENST00000515098.5
ENST00000542098.2
CDS-3UTR CCA 90 bp TCTAACTGGGACTATTTACAGTGGGAGATGGTACATACTGTTGAGGCTGTAGTGGCCAGGTGCCAGGCGTaGGCTGGTCCATCTCCCTCC +
Preference number: 4 (lower is better)
Translates to: SNWDYLQWEMVHTVEAVVARCQA*AGPSPS
Trigger: GGAGGGAGATGGACCAGCCCACGCCTGGCACCTGGC...CACTACAGCCTCAACAGTATGTACCATCTCCCACTGTAAATAGTCCCAGTTAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313386.9
ENST00000515098.5
ENST00000542098.2
CDS-3UTR CCA 90 bp TCTGAAACCAACCACAGTCCACTGAAGTTGACCACCCTACCGAGACAGACCAAGCCTTTCCTTATGCCATaGAGCCAGGTGCCAGGCGTG +
Preference number: 4 (lower is better)
Translates to: SETNHSPLKLTTLPRQTKPFLMP*SQVPGV
Trigger: CACGCCTGGCACCTGGCTCCATGGCATAAGGAAAGG...CTTGGTCTGTCTCGGTAGGGTGGTCAACTTCAGTGGACTGTGGTTGGTTTCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313386.9
ENST00000515098.5
ENST00000542098.2
CDS-3UTR CCA 90 bp GACTTGGCTGAGGGCAGGGGTGGAAGGATGTCTACTGCTGAAGACCAAATCCCTTTCCTGCCTGGACACTaGATACCTGCTGGCCATGTT +
Preference number: 4 (lower is better)
Translates to: DLAEGRGGRMSTAEDQIPFLPGH*IPAGHV
Trigger: AACATGGCCAGCAGGTATCCAGTGTCCAGGCAGGAA...AGGGATTTGGTCTTCAGCAGTAGACATCCTTCCACCCCTGCCCTCAGCCAAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313386.9
ENST00000515098.5
CDS-3UTR CCA 90 bp CTCTTGGGCCGAGGGGCAAGGGTGGACATAGCATTGGCATGGCAGCAAGAGACTCAGTTGGTGACTTCCTaGCATACAGGTTGTACAGCT +
Preference number: 4 (lower is better)
Translates to: LLGRGARVDIALAWQQETQLVTS*HTGCTA
Trigger: AGCTGTACAACCTGTATGCCAGGAAGTCACCAACTG...AGTCTCTTGCTGCCATGCCAATGCTATGTCCACCCTTGCCCCTCGGCCCAAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313386.9
ENST00000515098.5
CDS-3UTR TCA 90 bp GAAGGATGTCTACTGCTGAAGACCAAATCCCTTGCCACTCTGTCGGTTGCTACTCTTCCGGCAGCACTGTaGCATCACCAGAGAGAGGGT +
Preference number: 4 (lower is better)
Translates to: EGCLLLKTKSLATLSVATLPAAL*HHQREG
Trigger: ACCCTCTCTCTGGTGATGTCACAGTGCTGCCGGAAG...AGTAGCAACCGACAGAGTGGCAAGGGATTTGGTCTTCAGCAGTAGACATCCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313386.9
ENST00000515098.5
ENST00000542098.2
CDS-3UTR TCA 90 bp CTGCTGATACAGGTGTTCCACGATGGCCATCTGCAGGATCTGCTGCTGCTGTTCCGGGATACACTGCTGTaGATGTCCTTATGGTCCGAA +
Preference number: 4 (lower is better)
Translates to: LLIQVFHDGHLQDLLLLFRDTLL*MSLWSE
Trigger: TTCGGACCATAAGGACATTCACAGCAGTGTATCCCG...GAACAGCAGCAGCAGATCCTGCAGATGGCCATCGTGGAACACCTGTATCAGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512663.5
ENST00000512811.5
CDS-3UTR TCA 90 bp CCAAATCCCTTGCCACTCTGTCGGTTGCTACTAAGTCAAACGCAAACAGAAACAGCTCCTCGGCCACGCTaGGCATGCCCTGCTGATACA +
Preference number: 4 (lower is better)
Translates to: PNPLPLCRLLLSQTQTETAPRPR*ACPADT
Trigger: TGTATCAGCAGGGCATGCTCAGCGTGGCCGAGGAGC...TGTTTCTGTTTGCGTTTGACTTAGTAGCAACCGACAGAGTGGCAAGGGATTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313386.9
ENST00000515098.5
ENST00000542098.2
CDS-3UTR TCA 90 bp GACTATTTACAGTGGGAGATGGTACATACTGTTGAGGCTGTAGTGGGAGGAAGAAGTGCCGAGCATAGCTaGGGGCCTCCAGCTGCTTCG +
Preference number: 4 (lower is better)
Translates to: DYLQWEMVHTVEAVVGGRSAEHS*GPPAAS
Trigger: CGAAGCAGCTGGAGGCCCTCAGCTATGCTCGGCACT...TCTTCCTCCCACTACAGCCTCAACAGTATGTACCATCTCCCACTGTAAATAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313386.9
ENST00000515098.5
ENST00000542098.2
CDS-3UTR GCA 90 bp ACCAAATCCCTTGCCACTCTGTCGGTTGCTACTAAGTCAAACGCAAACAGAAACTCCACGCACGCACACTaGTCCATGGTGGCCTCAGCC +
Preference number: 4 (lower is better)
Translates to: TKSLATLSVATKSNANRNSTHAH*SMVASA
Trigger: GGCTGAGGCCACCATGGAGCAGTGTGCGTGCGTGGA...GTTTCTGTTTGCGTTTGACTTAGTAGCAACCGACAGAGTGGCAAGGGATTTGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313386.9
ENST00000515098.5
CDS-3UTR GCA 90 bp CCTTTCATAGTTGCCATGTGGGAATGTAGGCCCTGTGTGGCTGGACCATGCCTTTCCTGTCAATGGCTTTaGCCACTCGGGATACACTGC +
Preference number: 4 (lower is better)
Translates to: PFIVAMWECRPCVAGPCLSCQWL*PLGIHC
Trigger: GCAGTGTATCCCGAGTGGGCAAAGCCATTGACAGGA...AAGGCATGGTCCAGCCACACAGGGCCTACATTCCCACATGGCAACTATGAAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313386.9
ENST00000515098.5
CDS-3UTR GCA 90 bp AAGGACTCAGAGGGTTCTGTGCTGATGCTCAGCTGCCCAGGGCCGGGTGCTTTGAACTCTAGGAAAGGCTaGTTGAAATCCAAGTCCACA +
Preference number: 4 (lower is better)
Translates to: KDSEGSVLMLSCPGPGALNSRKG*LKSKST
Trigger: TGTGGACTTGGATTTCAAGCAGCCTTTCCTAGAGTT...CAAAGCACCCGGCCCTGGGCAGCTGAGCATCAGCACAGAACCCTCTGAGTCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313386.9
ENST00000515098.5
CDS-3UTR GCA 90 bp GACTATTTACAGTGGGAGATGGTACATACTGTTGAGGCTGTAGTGGGAGGAAGAAGTTCCAGCAGGCGCTaGCTGTGGGAGACGGCCCAT +
Preference number: 4 (lower is better)
Translates to: DYLQWEMVHTVEAVVGGRSSSRR*LWETAH
Trigger: ATGGGCCGTCTCCCACAGGCAGCGCCTGCTGGAACT...TCTTCCTCCCACTACAGCCTCAACAGTATGTACCATCTCCCACTGTAAATAGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313386.9
ENST00000515098.5
ENST00000542098.2
CDS-3UTR GCA 90 bp ACCAAATCCCTTGCCACTCTGTCGGTTGCTACTAAGTCAAACGCAAACAGAAACTGGATCTCCCGCTGGTaGAGCCGAGCAAAGGGCTGG +
Preference number: 4 (lower is better)
Translates to: TKSLATLSVATKSNANRNWISRW*SRAKGW
Trigger: CCAGCCCTTTGCTCGGCTGCACCAGCGGGAGATCCA...GTTTCTGTTTGCGTTTGACTTAGTAGCAACCGACAGAGTGGCAAGGGATTTGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313386.9
ENST00000515098.5
ENST00000542098.2
CDS-3UTR GCA 90 bp TCTGAAACCAACCACAGTCCACTGAAGTTGACCACCCTACCGAGACAGACCAAGGCAGGTACACCAGGCTaGCCATCATCACCTGGATCT +
Preference number: 4 (lower is better)
Translates to: SETNHSPLKLTTLPRQTKAGTPG*PSSPGS
Trigger: AGATCCAGGTGATGATGGGCAGCCTGGTGTACCTGC...CTTGGTCTGTCTCGGTAGGGTGGTCAACTTCAGTGGACTGTGGTTGGTTTCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313386.9
ENST00000515098.5
ENST00000542098.2
CDS-3UTR GCA 90 bp CATTCCGTTCTAACTGGGACTATTTACAGTGGGAGATGGTACATACTGTTGAGGTGCCATGGAGCCAGGTaGCAGGCGTGGGCTGGTCCA +
Preference number: 4 (lower is better)
Translates to: HSVLTGTIYSGRWYILLRCHGAR*QAWAGP
Trigger: TGGACCAGCCCACGCCTGGCACCTGGCTCCATGGCA...CCTCAACAGTATGTACCATCTCCCACTGTAAATAGTCCCAGTTAGAACGGAATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313386.9
ENST00000515098.5
ENST00000542098.2
CDS-3UTR GCA 90 bp TCTGTGGGTGTTTTCTTAAGCAGCAGCTGCTGGTTGGGCCAGCGAGTTGGTGGGAAGTTGTGTTCTTCCTaGCTGGACACTGGATACCTG +
Preference number: 4 (lower is better)
Translates to: SVGVFLSSSCWLGQRVGGKLCSS*LDTGYL
Trigger: CAGGTATCCAGTGTCCAGGCAGGAAGAACACAACTT...CCCACCAACTCGCTGGCCCAACCAGCAGCTGCTGCTTAAGAAAACACCCACAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313386.9
ENST00000515098.5
CDS-3UTR GCA 90 bp GACTATTTACAGTGGGAGATGGTACATACTGTTGAGGCTGTAGTGGGAGGAAGAGTGCTGATGCTCAGCTaGCCAGGGCCGGGTGCTTTG +
Preference number: 4 (lower is better)
Translates to: DYLQWEMVHTVEAVVGGRVLMLS*PGPGAL
Trigger: CAAAGCACCCGGCCCTGGGCAGCTGAGCATCAGCAC...TCTTCCTCCCACTACAGCCTCAACAGTATGTACCATCTCCCACTGTAAATAGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313386.9
ENST00000515098.5
CDS-3UTR CCA 90 bp TCCTCAGCCAGGCGCTCTGAAACCAACCACAGTCCACTGAAGTTGACCACCCTACGAAGTTCCTGTCAATaGCTTTGCCCACTCGGGATA +
Preference number: 4 (lower is better)
Translates to: SSARRSETNHSPLKLTTLRSSCQ*LCPLGI
Trigger: TATCCCGAGTGGGCAAAGCCATTGACAGGAACTTCG...TAGGGTGGTCAACTTCAGTGGACTGTGGTTGGTTTCAGAGCGCCTGGCTGAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313386.9
ENST00000515098.5
ENST00000542098.2
CDS-3UTR CCA 90 bp GACTATTTACAGTGGGAGATGGTACATACTGTTGAGGCTGTAGTGGGAGGAAGAAGCAGGCGCTGCCTGTaGGAGACGGCCCATTCCAAC +
Preference number: 4 (lower is better)
Translates to: DYLQWEMVHTVEAVVGGRSRRCL*ETAHSN
Trigger: GTTGGAATGGGCCGTCTCCCACAGGCAGCGCCTGCT...TCTTCCTCCCACTACAGCCTCAACAGTATGTACCATCTCCCACTGTAAATAGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313386.9
ENST00000515098.5
ENST00000542098.2
CDS-3UTR CCA 90 bp GTTGACCACCCTACCGAGACAGACCAAGGCTCACAGGTGAAAACCCCTTTCAACCAAGCGAACACGGAGTaGTACCAGCACTTCATGCCT +
Preference number: 4 (lower is better)
Translates to: VDHPTETDQGSQVKTPFNQANTE*YQHFMP
Trigger: AGGCATGAAGTGCTGGTACCACTCCGTGTTCGCTTG...GTTGAAAGGGGTTTTCACCTGTGAGCCTTGGTCTGTCTCGGTAGGGTGGTCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000313386.9
ENST00000515098.5
ENST00000542098.2
CDS-3UTR CCA 90 bp CCTTTCATAGTTGCCATGTGGGAATGTAGGCCCTGTGTGGCTGGACCATGCCTTTGTGTTCTTCCTGCCTaGACACTGGATACCTGCTGG +
Preference number: 4 (lower is better)
Translates to: PFIVAMWECRPCVAGPCLCVLPA*TLDTCW
Trigger: CCAGCAGGTATCCAGTGTCCAGGCAGGAAGAACACA...AAGGCATGGTCCAGCCACACAGGGCCTACATTCCCACATGGCAACTATGAAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313386.9
ENST00000515098.5
CDS-3UTR CCA 90 bp CAGTGGAACTCCTCAGCCAGGCGCTCTGAAACCAACCACAGTCCACTGAAGTTGAATAGAGGCTGGGGGTaGATCTTGGGTACCTACAGT +
Preference number: 4 (lower is better)
Translates to: QWNSSARRSETNHSPLKLNRGWG*ILGTYS
Trigger: ACTGTAGGTACCCAAGATCCACCCCCAGCCTCTATT...CAACTTCAGTGGACTGTGGTTGGTTTCAGAGCGCCTGGCTGAGGAGTTCCACTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313386.9
ENST00000515098.5
CDS-3UTR TCA 90 bp GACTATTTACAGTGGGAGATGGTACATACTGTTGAGGCTGTAGTGGGAGGAAGACTGCCAAGAGGCGGATaGAGTGCAGTCGGTGCAGCT +
Preference number: 4 (lower is better)
Translates to: DYLQWEMVHTVEAVVGGRLPRGG*SAVGAA
Trigger: AGCTGCACCGACTGCACTTCATCCGCCTCTTGGCAG...TCTTCCTCCCACTACAGCCTCAACAGTATGTACCATCTCCCACTGTAAATAGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313386.9
ENST00000515098.5
ENST00000542098.2
CDS-3UTR TCA 90 bp GAAGGATGTCTACTGCTGAAGACCAAATCCCTTGCCACTCTGTCGGTTGCTACTGGTAACTCGTCCTTGTaGTTCCAGACCCCAGTGCAC +
Preference number: 4 (lower is better)
Translates to: EGCLLLKTKSLATLSVATGNSSL*FQTPVH
Trigger: GTGCACTGGGGTCTGGAATCACAAGGACGAGTTACC...AGTAGCAACCGACAGAGTGGCAAGGGATTTGGTCTTCAGCAGTAGACATCCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313386.9
ENST00000515098.5
ENST00000542098.2
CDS-3UTR TCA 90 bp AAGCTCCCCGCAGTCAGGGATGCAAGTTGTGTTCTTCCTGCCTGGACACTGGATGTAGGAATCAGAATATaGTGCGTTTCCCATCTGCCG +
Preference number: 4 (lower is better)
Translates to: KLPAVRDASCVLPAWTLDVGIRI*CVSHLP
Trigger: CGGCAGATGGGAAACGCATCATATTCTGATTCCTAC...ATCCAGTGTCCAGGCAGGAAGAACACAACTTGCATCCCTGACTGCGGGGAGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313386.9
ENST00000515098.5
CDS-3UTR TCA 90 bp TCCTCAGCCAGGCGCTCTGAAACCAACCACAGTCCACTGAAGTTGACCACCCTAGTAGGAATCAGAATATaGTGCGTTTCCCATCTGCCG +
Preference number: 4 (lower is better)
Translates to: SSARRSETNHSPLKLTTLVGIRI*CVSHLP
Trigger: CGGCAGATGGGAAACGCATCATATTCTGATTCCTAC...TAGGGTGGTCAACTTCAGTGGACTGTGGTTGGTTTCAGAGCGCCTGGCTGAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313386.9
ENST00000515098.5
ENST00000542098.2
CDS-3UTR TCA 90 bp ACCAAATCCCTTGCCACTCTGTCGGTTGCTACTAAGTCAAACGCAAACAGAAACGGTGGGCGGGAAGAGTaGAGCAGTCTTCCTCAGCAG +
Preference number: 4 (lower is better)
Translates to: TKSLATLSVATKSNANRNGGREE*SSLPQQ
Trigger: CTGCTGAGGAAGACTGCTTCACTCTTCCCGCCCACC...GTTTCTGTTTGCGTTTGACTTAGTAGCAACCGACAGAGTGGCAAGGGATTTGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313386.9
ENST00000515098.5
CDS-3UTR GCA 90 bp GACTTGGCTGAGGGCAGGGGTGGAAGGATGTCTACTGCTGAAGACCAAATCCCTCCACTCGGGATACACTaGTGTGAATGTCCTTATGGT +
Preference number: 4 (lower is better)
Translates to: DLAEGRGGRMSTAEDQIPPLGIH*CECPYG
Trigger: ACCATAAGGACATTCACAGCAGTGTATCCCGAGTGG...AGGGATTTGGTCTTCAGCAGTAGACATCCTTCCACCCCTGCCCTCAGCCAAGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313386.9
ENST00000515098.5
ENST00000542098.2
CDS-3UTR GCA 90 bp GACTATTTACAGTGGGAGATGGTACATACTGTTGAGGCTGTAGTGGGAGGAAGAATCTGCAGGATCTGCTaGTGCTGTTCCCGCGCGTCC +
Preference number: 4 (lower is better)
Translates to: DYLQWEMVHTVEAVVGGRICRIC*CCSRAS
Trigger: GGACGCGCGGGAACAGCAGCAGCAGATCCTGCAGAT...TCTTCCTCCCACTACAGCCTCAACAGTATGTACCATCTCCCACTGTAAATAGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313386.9
ENST00000515098.5
ENST00000542098.2
CDS-3UTR GCA 90 bp TCTTGTTCGTGCAGGGCTTCCAGGATTCGATTCAACTCTAGGAAAGGCTGCTTGTCCACGATGGCCATCTaGAGGATCTGCTGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: SCSCRASRIRFNSRKGCLSTMAI*RICCCC
Trigger: ACAGCAGCAGCAGATCCTGCAGATGGCCATCGTGGA...CAAGCAGCCTTTCCTAGAGTTGAATCGAATCCTGGAAGCCCTGCACGAACAAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512811.5
CDS-3UTR GCA 90 bp CTCTTGGGCCGAGGGGCAAGGGTGGACATAGCATTGGCATGGCAGCAAGAGACTAACTCTAGGAAAGGCTaGTTGAAATCCAAGTCCACA +
Preference number: 4 (lower is better)
Translates to: LLGRGARVDIALAWQQETNSRKG*LKSKST
Trigger: TGTGGACTTGGATTTCAAGCAGCCTTTCCTAGAGTT...AGTCTCTTGCTGCCATGCCAATGCTATGTCCACCCTTGCCCCTCGGCCCAAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313386.9
ENST00000515098.5
ENST00000542098.2
CDS-3UTR GCA 90 bp ACCAAATCCCTTGCCACTCTGTCGGTTGCTACTAAGTCAAACGCAAACAGAAACCCTCTGCCAAAGGGCTaGTCCAGTGCTCCCCTCAGT +
Preference number: 4 (lower is better)
Translates to: TKSLATLSVATKSNANRNPLPKG*SSAPLS
Trigger: ACTGAGGGGAGCACTGGAGCAGCCCTTTGGCAGAGG...GTTTCTGTTTGCGTTTGACTTAGTAGCAACCGACAGAGTGGCAAGGGATTTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313386.9
ENST00000515098.5
ENST00000542098.2
CDS-3UTR GCA 90 bp TCTCCCTTTCCTTATGCCATGGAGCCAGGTGCCAGGCGTGGGCTGGTCCATCTCAATATGAAGCTAAAATaGATTCCCCCGAGCTCTCTT +
Preference number: 4 (lower is better)
Translates to: SPFPYAMEPGARRGLVHLNMKLK*IPPSSL
Trigger: AAGAGAGCTCGGGGGAATGCATTTTAGCTTCATATT...GAGATGGACCAGCCCACGCCTGGCACCTGGCTCCATGGCATAAGGAAAGGGAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313386.9
ENST00000515098.5
CDS-3UTR GCA 90 bp TCTGAAACCAACCACAGTCCACTGAAGTTGACCACCCTACCGAGACAGACCAAGTTCTTAAGCAGCAGCTaGTGGTTGGGCCAGCGAGTT +
Preference number: 4 (lower is better)
Translates to: SETNHSPLKLTTLPRQTKFLSSS*WLGQRV
Trigger: AACTCGCTGGCCCAACCAGCAGCTGCTGCTTAAGAA...CTTGGTCTGTCTCGGTAGGGTGGTCAACTTCAGTGGACTGTGGTTGGTTTCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313386.9
ENST00000515098.5
CDS-3UTR CCA 90 bp CGTCCCACACCGCATCTGACACAACACCACAGATCTCAGAGTCGAAGTTCCTGTCGAAGTTCCTGTCAATaGCTTTGCCCACTCGGGATA +
Preference number: 4 (lower is better)
Translates to: RPTPHLTQHHRSQSRSSCRSSCQ*LCPLGI
Trigger: TATCCCGAGTGGGCAAAGCCATTGACAGGAACTTCG...ACAGGAACTTCGACTCTGAGATCTGTGGTGTTGTGTCAGATGCGGTGTGGGACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512663.5
ENST00000512811.5
CDS-3UTR CCA 90 bp CCAAATCCCTTGCCACTCTGTCGGTTGCTACTAAGTCAAACGCAAACAGAAACACTGCCCATCATCACCTaGATCTCCCGCTGGTGCAGC +
Preference number: 4 (lower is better)
Translates to: PNPLPLCRLLLSQTQTETLPIIT*ISRWCS
Trigger: GCTGCACCAGCGGGAGATCCAGGTGATGATGGGCAG...TGTTTCTGTTTGCGTTTGACTTAGTAGCAACCGACAGAGTGGCAAGGGATTTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313386.9
ENST00000515098.5
ENST00000542098.2
CDS-3UTR CCA 90 bp TCTGAAACCAACCACAGTCCACTGAAGTTGACCACCCTACCGAGACAGACCAAGCAAGCGAACACGGAGTaGTACCAGCACTTCATGCCT +
Preference number: 4 (lower is better)
Translates to: SETNHSPLKLTTLPRQTKQANTE*YQHFMP
Trigger: AGGCATGAAGTGCTGGTACCACTCCGTGTTCGCTTG...CTTGGTCTGTCTCGGTAGGGTGGTCAACTTCAGTGGACTGTGGTTGGTTTCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313386.9
ENST00000515098.5
ENST00000542098.2
CDS-3UTR CCA 90 bp TCCTCAGCCAGGCGCTCTGAAACCAACCACAGTCCACTGAAGTTGACCACCCTATCTCGGGAGATAACATaGCCACAGATGAGCTTGATG +
Preference number: 4 (lower is better)
Translates to: SSARRSETNHSPLKLTTLSREIT*PQMSLM
Trigger: CATCAAGCTCATCTGTGGCCATGTTATCTCCCGAGA...TAGGGTGGTCAACTTCAGTGGACTGTGGTTGGTTTCAGAGCGCCTGGCTGAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313386.9
ENST00000515098.5
ENST00000542098.2
CDS-3UTR CCA 90 bp GCCCTGTTGTGCAAGTTACTTCATTTTCCTGAATCCCATTACACGGATTTCTCCCAGTGCTCCCCTCAGTaGAACTCCTCAGCCAGGCGC +
Preference number: 4 (lower is better)
Translates to: ALLCKLLHFPESHYTDFSQCSPQ*NSSARR
Trigger: GCGCCTGGCTGAGGAGTTCCACTGAGGGGAGCACTG...GGAGAAATCCGTGTAATGGGATTCAGGAAAATGAAGTAACTTGCACAACAGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313386.9
ENST00000515098.5
CDS-3UTR CCA 90 bp GAAGGATGTCTACTGCTGAAGACCAAATCCCTTGCCACTCTGTCGGTTGCTACTCCCAGACCCACTTCATaGAAGCCTAAAGCCCCCACA +
Preference number: 4 (lower is better)
Translates to: EGCLLLKTKSLATLSVATPRPTS*KPKAPT
Trigger: TGTGGGGGCTTTAGGCTTCCATGAAGTGGGTCTGGG...AGTAGCAACCGACAGAGTGGCAAGGGATTTGGTCTTCAGCAGTAGACATCCTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313386.9
ENST00000515098.5
CDS-3UTR CCA 90 bp CCAAATCCCTTGCCACTCTGTCGGTTGCTACTAAGTCAAACGCAAACAGAAACACACACTGCTCCATGGTaGCCTCAGCCTGGGCATGGT +
Preference number: 4 (lower is better)
Translates to: PNPLPLCRLLLSQTQTETHTAPW*PQPGHG
Trigger: ACCATGCCCAGGCTGAGGCCACCATGGAGCAGTGTG...TGTTTCTGTTTGCGTTTGACTTAGTAGCAACCGACAGAGTGGCAAGGGATTTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515098.5
CDS-3UTR TCA 90 bp GCTGTGAATGTCCTTATGGTCCGAAGCCAGTTTCTGCACCGTATCTTTGATCTTCTTCCGGCAGCACTGTaGCATCACCAGAGAGAGGGT +
Preference number: 4 (lower is better)
Translates to: AVNVLMVRSQFLHRIFDLLPAAL*HHQREG
Trigger: ACCCTCTCTCTGGTGATGTCACAGTGCTGCCGGAAG...AAGATCAAAGATACGGTGCAGAAACTGGCTTCGGACCATAAGGACATTCACAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512663.5
CDS-3UTR TCA 90 bp GTGGAAGGATGTCTACTGCTGAAGACCAAATCCCTTGCCACTCTGTCGGTTGCTCGGGATACACTGCTGTaGATGTCCTTATGGTCCGAA +
Preference number: 4 (lower is better)
Translates to: VEGCLLLKTKSLATLSVARDTLL*MSLWSE
Trigger: TTCGGACCATAAGGACATTCACAGCAGTGTATCCCG...AGCAACCGACAGAGTGGCAAGGGATTTGGTCTTCAGCAGTAGACATCCTTCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313386.9
ENST00000515098.5
ENST00000542098.2
CDS-3UTR TCA 90 bp CCGAGGGGCAAGGGTGGACATAGCATTGGCATGGCAGCAAGAGACTTGGCTGAGCATGCCTTCAAAGTCTaGTTGAGTTTAAATGATGGC +
Preference number: 4 (lower is better)
Translates to: PRGKGGHSIGMAARDLAEHAFKV*LSLNDG
Trigger: GCCATCATTTAAACTCAATCAGACTTTGAAGGCATG...CTCAGCCAAGTCTCTTGCTGCCATGCCAATGCTATGTCCACCCTTGCCCCTCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313386.9
ENST00000515098.5
CDS-3UTR GCA 90 bp GCGCGTCCCACACCGCATCTGACACAACACCACAGATCTCAGAGTCGAAGTTCCAACTCTAGGAAAGGCTaGTTGAAATCCAAGTCCACA +
Preference number: 4 (lower is better)
Translates to: ARPTPHLTQHHRSQSRSSNSRKG*LKSKST
Trigger: TGTGGACTTGGATTTCAAGCAGCCTTTCCTAGAGTT...GGAACTTCGACTCTGAGATCTGTGGTGTTGTGTCAGATGCGGTGTGGGACGCGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512811.5
CDS-3UTR GCA 90 bp CCAAATCCCTTGCCACTCTGTCGGTTGCTACTAAGTCAAACGCAAACAGAAACAGGTCTCACAGATCTCTaGCCAGTGGCTGCTGTCCAG +
Preference number: 4 (lower is better)
Translates to: PNPLPLCRLLLSQTQTETGLTDL*PVAAVQ
Trigger: CTGGACAGCAGCCACTGGGCAGAGATCTGTGAGACC...TGTTTCTGTTTGCGTTTGACTTAGTAGCAACCGACAGAGTGGCAAGGGATTTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313386.9
ENST00000515098.5
ENST00000542098.2
CDS-3UTR GCA 90 bp ACCAAATCCCTTGCCACTCTGTCGGTTGCTACTAAGTCAAACGCAAACAGAAACGATGCGTTTCCCATCTaGCGGGTTCTGCTCCATGGG +
Preference number: 4 (lower is better)
Translates to: TKSLATLSVATKSNANRNDAFPI*RVLLHG
Trigger: CCCATGGAGCAGAACCCGGCAGATGGGAAACGCATC...GTTTCTGTTTGCGTTTGACTTAGTAGCAACCGACAGAGTGGCAAGGGATTTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313386.9
ENST00000515098.5
ENST00000542098.2
CDS-3UTR GCA 90 bp CCAAATCCCTTGCCACTCTGTCGGTTGCTACTAAGTCAAACGCAAACAGAAACAAAAGGGCTGCTCCAGTaGTCCCCTCAGTGGAACTCC +
Preference number: 4 (lower is better)
Translates to: PNPLPLCRLLLSQTQTETKGLLQ*SPQWNS
Trigger: GGAGTTCCACTGAGGGGAGCACTGGAGCAGCCCTTT...TGTTTCTGTTTGCGTTTGACTTAGTAGCAACCGACAGAGTGGCAAGGGATTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000313386.9
ENST00000515098.5
ENST00000542098.2
CDS-3UTR GCA 90 bp GGATGTCTACTGCTGAAGACCAAATCCCTTGCCACTCTGTCGGTTGCTACTAAGTTCTTAAGCAGCAGCTaGTGGTTGGGCCAGCGAGTT +
Preference number: 4 (lower is better)
Translates to: GCLLLKTKSLATLSVATKFLSSS*WLGQRV
Trigger: AACTCGCTGGCCCAACCAGCAGCTGCTGCTTAAGAA...CTTAGTAGCAACCGACAGAGTGGCAAGGGATTTGGTCTTCAGCAGTAGACATCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313386.9
ENST00000515098.5
CDS-3UTR CCA 90 bp TCTTGTTCGTGCAGGGCTTCCAGGATTCGATTCAACTCTAGGAAAGGCTGCTTGACAGGTGTTCCACGATaGCCATCTGCAGGATCTGCT +
Preference number: 4 (lower is better)
Translates to: SCSCRASRIRFNSRKGCLTGVPR*PSAGSA
Trigger: AGCAGATCCTGCAGATGGCCATCGTGGAACACCTGT...CAAGCAGCCTTTCCTAGAGTTGAATCGAATCCTGGAAGCCCTGCACGAACAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512811.5
CDS-3UTR CCA 90 bp GAAGGATGTCTACTGCTGAAGACCAAATCCCTTGCCACTCTGTCGGTTGCTACTACAGGTGTTCCACGATaGCCATCTGCAGGATCTGCT +
Preference number: 4 (lower is better)
Translates to: EGCLLLKTKSLATLSVATTGVPR*PSAGSA
Trigger: AGCAGATCCTGCAGATGGCCATCGTGGAACACCTGT...AGTAGCAACCGACAGAGTGGCAAGGGATTTGGTCTTCAGCAGTAGACATCCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313386.9
ENST00000515098.5
ENST00000542098.2
CDS-3UTR CCA 90 bp GCCCTGTTGTGCAAGTTACTTCATTTTCCTGAATCCCATTACACGGATTTCTCCGAATCTGACGTCTGCTaGCGGAGGATGGGGCAAGCG +
Preference number: 4 (lower is better)
Translates to: ALLCKLLHFPESHYTDFSESDVC*RRMGQA
Trigger: CGCTTGCCCCATCCTCCGCCAGCAGACGTCAGATTC...GGAGAAATCCGTGTAATGGGATTCAGGAAAATGAAGTAACTTGCACAACAGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313386.9
ENST00000515098.5
CDS-3UTR CCA 90 bp ACTGAAGTTGACCACCCTACCGAGACAGACCAAGGCTCACAGGTGAAAACCCCTTCTCGGGAGATAACATaGCCACAGATGAGCTTGATG +
Preference number: 4 (lower is better)
Translates to: TEVDHPTETDQGSQVKTPSREIT*PQMSLM
Trigger: CATCAAGCTCATCTGTGGCCATGTTATCTCCCGAGA...AGGGGTTTTCACCTGTGAGCCTTGGTCTGTCTCGGTAGGGTGGTCAACTTCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000313386.9
ENST00000515098.5
ENST00000542098.2
CDS-3UTR CCA 90 bp GTTGACCACCCTACCGAGACAGACCAAGGCTCACAGGTGAAAACCCCTTTCAACAGTGAGGCTAAAGGTTaGCCAGGAGAAATGAGAAGG +
Preference number: 4 (lower is better)
Translates to: VDHPTETDQGSQVKTPFNSEAKG*PGEMRR
Trigger: CCTTCTCATTTCTCCTGGCCAACCTTTAGCCTCACT...GTTGAAAGGGGTTTTCACCTGTGAGCCTTGGTCTGTCTCGGTAGGGTGGTCAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313386.9
ENST00000515098.5
CDS-3UTR CCA 90 bp GAAGGATGTCTACTGCTGAAGACCAAATCCCTTGCCACTCTGTCGGTTGCTACTTGTGTTCTTCCTGCCTaGACACTGGATACCTGCTGG +
Preference number: 4 (lower is better)
Translates to: EGCLLLKTKSLATLSVATCVLPA*TLDTCW
Trigger: CCAGCAGGTATCCAGTGTCCAGGCAGGAAGAACACA...AGTAGCAACCGACAGAGTGGCAAGGGATTTGGTCTTCAGCAGTAGACATCCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313386.9
ENST00000515098.5
CDS-3UTR CCA 90 bp TCTGTGGGTGTTTTCTTAAGCAGCAGCTGCTGGTTGGGCCAGCGAGTTGGTGGGCAAGTTCAGGCACCCTaGAATAAACTGGAAATAGCT +
Preference number: 4 (lower is better)
Translates to: SVGVFLSSSCWLGQRVGGQVQAP*NKLEIA
Trigger: AGCTATTTCCAGTTTATTCCAGGGTGCCTGAACTTG...CCCACCAACTCGCTGGCCCAACCAGCAGCTGCTGCTTAAGAAAACACCCACAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313386.9
ENST00000515098.5
CDS-3UTR CCA 90 bp CCAAATCCCTTGCCACTCTGTCGGTTGCTACTAAGTCAAACGCAAACAGAAACACTCAGAAGGCTGAGGTaGGACGGAGGACTGCTTGAG +
Preference number: 4 (lower is better)
Translates to: PNPLPLCRLLLSQTQTETLRRLR*DGGLLE
Trigger: CTCAAGCAGTCCTCCGTCCCACCTCAGCCTTCTGAG...TGTTTCTGTTTGCGTTTGACTTAGTAGCAACCGACAGAGTGGCAAGGGATTTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000515098.5
ENST00000542098.2
CDS-3UTR CCA 90 bp CATTCCGTTCTAACTGGGACTATTTACAGTGGGAGATGGTACATACTGTTGAGGACGCACACTGCTCCATaGTGGCCTCAGCCTGGGCAT +
Preference number: 4 (lower is better)
Translates to: HSVLTGTIYSGRWYILLRTHTAP*WPQPGH
Trigger: ATGCCCAGGCTGAGGCCACCATGGAGCAGTGTGCGT...CCTCAACAGTATGTACCATCTCCCACTGTAAATAGTCCCAGTTAGAACGGAATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515098.5
CDS-3UTR TCA 90 bp GGATGTCTACTGCTGAAGACCAAATCCCTTGCCACTCTGTCGGTTGCTACTAAGCGGGATACACTGCTGTaGATGTCCTTATGGTCCGAA +
Preference number: 4 (lower is better)
Translates to: GCLLLKTKSLATLSVATKRDTLL*MSLWSE
Trigger: TTCGGACCATAAGGACATTCACAGCAGTGTATCCCG...CTTAGTAGCAACCGACAGAGTGGCAAGGGATTTGGTCTTCAGCAGTAGACATCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313386.9
ENST00000515098.5
ENST00000542098.2
CDS-3UTR TCA 90 bp GCTGTGAATGTCCTTATGGTCCGAAGCCAGTTTCTGCACCGTATCTTTGATCTTGTCCCACACCGCATCTaGCACAACACCACAGATCTC +
Preference number: 4 (lower is better)
Translates to: AVNVLMVRSQFLHRIFDLVPHRI*HNTTDL
Trigger: GAGATCTGTGGTGTTGTGTCAGATGCGGTGTGGGAC...AAGATCAAAGATACGGTGCAGAAACTGGCTTCGGACCATAAGGACATTCACAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512663.5
CDS-3UTR TCA 90 bp CAAAGTTATAAAACAACGGCATTCCGTTCTAACTGGGACTATTTACAGTGGGAGCAGGTGGCAGTAGGGTaGCTTCTCCAAGCCCAGCCG +
Preference number: 4 (lower is better)
Translates to: QSYKTTAFRSNWDYLQWEQVAVG*LLQAQP
Trigger: CGGCTGGGCTTGGAGAAGTCACCCTACTGCCACCTG...CTCCCACTGTAAATAGTCCCAGTTAGAACGGAATGCCGTTGTTTTATAACTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313386.9
ENST00000515098.5
ENST00000542098.2
CDS-3UTR TCA 90 bp GTTGACCACCCTACCGAGACAGACCAAGGCTCACAGGTGAAAACCCCTTTCAACACCAAGGCTCACAGGTaGAAACCCCTTTCAACAAAA +
Preference number: 4 (lower is better)
Translates to: VDHPTETDQGSQVKTPFNTKAHR*KPLSTK
Trigger: TTTTGTTGAAAGGGGTTTTCACCTGTGAGCCTTGGT...GTTGAAAGGGGTTTTCACCTGTGAGCCTTGGTCTGTCTCGGTAGGGTGGTCAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000313386.9
ENST00000515098.5
ENST00000542098.2
CDS-3UTR TCA 90 bp TCTGAAACCAACCACAGTCCACTGAAGTTGACCACCCTACCGAGACAGACCAAGAAGGATGTCTACTGCTaGAGACCAAATCCCTTGCCA +
Preference number: 4 (lower is better)
Translates to: SETNHSPLKLTTLPRQTKKDVYC*RPNPLP
Trigger: TGGCAAGGGATTTGGTCTTCAGCAGTAGACATCCTT...CTTGGTCTGTCTCGGTAGGGTGGTCAACTTCAGTGGACTGTGGTTGGTTTCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313386.9
ENST00000515098.5
ENST00000542098.2
CDS-3UTR TCA 90 bp GAAGGATGTCTACTGCTGAAGACCAAATCCCTTGCCACTCTGTCGGTTGCTACTGATGGTACATACTGTTaGGGCTGTAGTGGGAGGAAG +
Preference number: 4 (lower is better)
Translates to: EGCLLLKTKSLATLSVATDGTYC*GCSGRK
Trigger: CTTCCTCCCACTACAGCCTCAACAGTATGTACCATC...AGTAGCAACCGACAGAGTGGCAAGGGATTTGGTCTTCAGCAGTAGACATCCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313386.9
ENST00000515098.5
ENST00000542098.2
CDS-3UTR TCA 90 bp CAAAGTTATAAAACAACGGCATTCCGTTCTAACTGGGACTATTTACAGTGGGAGCAGAGGGTTCTGTGCTaGTGCTCAGCTGCCCAGGGC +
Preference number: 4 (lower is better)
Translates to: QSYKTTAFRSNWDYLQWEQRVLC*CSAAQG
Trigger: GCCCTGGGCAGCTGAGCATCAGCACAGAACCCTCTG...CTCCCACTGTAAATAGTCCCAGTTAGAACGGAATGCCGTTGTTTTATAACTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313386.9
ENST00000515098.5
CDS-3UTR GCA 90 bp GAAGCCAGTTTCTGCACCGTATCTTTGATCTTCCGGCAGCACTGTGACATCACCCCACTCGGGATACACTaGTGTGAATGTCCTTATGGT +
Preference number: 4 (lower is better)
Translates to: EASFCTVSLIFRQHCDITPLGIH*CECPYG
Trigger: ACCATAAGGACATTCACAGCAGTGTATCCCGAGTGG...GGTGATGTCACAGTGCTGCCGGAAGATCAAAGATACGGTGCAGAAACTGGCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512663.5
CDS-3UTR GCA 90 bp CCAAATCCCTTGCCACTCTGTCGGTTGCTACTAAGTCAAACGCAAACAGAAACACCCAGGTCTTGTTCGTaGAGGGCTTCCAGGATTCGA +
Preference number: 4 (lower is better)
Translates to: PNPLPLCRLLLSQTQTETPRSCS*RASRIR
Trigger: TCGAATCCTGGAAGCCCTGCACGAACAAGACCTGGG...TGTTTCTGTTTGCGTTTGACTTAGTAGCAACCGACAGAGTGGCAAGGGATTTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313386.9
ENST00000515098.5
ENST00000542098.2
CDS-3UTR GCA 90 bp ACCAAATCCCTTGCCACTCTGTCGGTTGCTACTAAGTCAAACGCAAACAGAAACCCAGTGCACTGCCGCTaGTCAATCACAGCCTTGATG +
Preference number: 4 (lower is better)
Translates to: TKSLATLSVATKSNANRNPVHCR*SITALM
Trigger: CATCAAGGCTGTGATTGAGCAGCGGCAGTGCACTGG...GTTTCTGTTTGCGTTTGACTTAGTAGCAACCGACAGAGTGGCAAGGGATTTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313386.9
ENST00000515098.5
ENST00000542098.2
CDS-3UTR GCA 90 bp GCCCTGTTGTGCAAGTTACTTCATTTTCCTGAATCCCATTACACGGATTTCTCCAAAGGGCTGCTCCAGTaGTCCCCTCAGTGGAACTCC +
Preference number: 4 (lower is better)
Translates to: ALLCKLLHFPESHYTDFSKGLLQ*SPQWNS
Trigger: GGAGTTCCACTGAGGGGAGCACTGGAGCAGCCCTTT...GGAGAAATCCGTGTAATGGGATTCAGGAAAATGAAGTAACTTGCACAACAGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313386.9
ENST00000515098.5
CDS-3UTR GCA 90 bp TCTGAAACCAACCACAGTCCACTGAAGTTGACCACCCTACCGAGACAGACCAAGTGTGTGGCTGGACCATaGCTTCAAAGTCTGATTGAG +
Preference number: 4 (lower is better)
Translates to: SETNHSPLKLTTLPRQTKCVAGP*LQSLIE
Trigger: CTCAATCAGACTTTGAAGGCATGGTCCAGCCACACA...CTTGGTCTGTCTCGGTAGGGTGGTCAACTTCAGTGGACTGTGGTTGGTTTCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313386.9
ENST00000515098.5
CDS-3UTR CCA 90 bp TCCTCAGCCAGGCGCTCTGAAACCAACCACAGTCCACTGAAGTTGACCACCCTACAAGTTCAGGCACCCTaGAATAAACTGGAAATAGCT +
Preference number: 4 (lower is better)
Translates to: SSARRSETNHSPLKLTTLQVQAP*NKLEIA
Trigger: AGCTATTTCCAGTTTATTCCAGGGTGCCTGAACTTG...TAGGGTGGTCAACTTCAGTGGACTGTGGTTGGTTTCAGAGCGCCTGGCTGAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313386.9
ENST00000515098.5
CDS-3UTR CCA 90 bp ACCAAATCCCTTGCCACTCTGTCGGTTGCTACTAAGTCAAACGCAAACAGAAACTTAAGCAGCAGCTGCTaGTTGGGCCAGCGAGTTGGT +
Preference number: 4 (lower is better)
Translates to: TKSLATLSVATKSNANRNLSSSC*LGQRVG
Trigger: ACCAACTCGCTGGCCCAACCAGCAGCTGCTGCTTAA...GTTTCTGTTTGCGTTTGACTTAGTAGCAACCGACAGAGTGGCAAGGGATTTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313386.9
ENST00000515098.5
CDS-3UTR CCA 90 bp GTGGAAGGATGTCTACTGCTGAAGACCAAATCCCTTGCCACTCTGTCGGTTGCTCAGTTGGTGACTTCCTaGCATACAGGTTGTACAGCT +
Preference number: 4 (lower is better)
Translates to: VEGCLLLKTKSLATLSVAQLVTS*HTGCTA
Trigger: AGCTGTACAACCTGTATGCCAGGAAGTCACCAACTG...AGCAACCGACAGAGTGGCAAGGGATTTGGTCTTCAGCAGTAGACATCCTTCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313386.9
ENST00000515098.5
CDS-3UTR CCA 90 bp CAGTGGAACTCCTCAGCCAGGCGCTCTGAAACCAACCACAGTCCACTGAAGTTGAAGGAACTTACCGTTTaGCCTGATGGTAAGAACCAA +
Preference number: 4 (lower is better)
Translates to: QWNSSARRSETNHSPLKLKELTV*PDGKNQ
Trigger: TTGGTTCTTACCATCAGGCCAAACGGTAAGTTCCTT...CAACTTCAGTGGACTGTGGTTGGTTTCAGAGCGCCTGGCTGAGGAGTTCCACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313386.9
ENST00000515098.5
CDS-3UTR CCA 90 bp ACTGAAGTTGACCACCCTACCGAGACAGACCAAGGCTCACAGGTGAAAACCCCTTACAGTATCACTTCTTaGGATAAAGCAGGAGGCCCT +
Preference number: 4 (lower is better)
Translates to: TEVDHPTETDQGSQVKTPYSITS*DKAGGP
Trigger: AGGGCCTCCTGCTTTATCCCAAGAAGTGATACTGTA...AGGGGTTTTCACCTGTGAGCCTTGGTCTGTCTCGGTAGGGTGGTCAACTTCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313386.9
ENST00000515098.5
3UTR CAA 72 bp ATGGTTGTGGGCCAGATTAGGCTGGTGGGTCATCAGTaGGTGACTTCCTGGCATACAGGTTGTACAGCTTTT +
Preference number: 4 (lower is better)
Translates to: MVVGQIRLVGHQ*VTSWHTGCTAF
Trigger: AAAAGCTGTACAACCTGTATGCCAGGAAGTCACCAACTGATGACCCACCAGCCTAATCTGGCCCACAACCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313386.9
ENST00000515098.5
CDS-3UTR TCA 90 bp GGATGTCTACTGCTGAAGACCAAATCCCTTGCCACTCTGTCGGTTGCTACTAAGGCTCAATCACAGCCTTaGTGTTCATCAACACAGGCA +
Preference number: 4 (lower is better)
Translates to: GCLLLKTKSLATLSVATKAQSQP*CSSTQA
Trigger: TGCCTGTGTTGATGAACATCAAGGCTGTGATTGAGC...CTTAGTAGCAACCGACAGAGTGGCAAGGGATTTGGTCTTCAGCAGTAGACATCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313386.9
ENST00000515098.5
ENST00000542098.2
CDS-3UTR TCA 90 bp CCAAATCCCTTGCCACTCTGTCGGTTGCTACTAAGTCAAACGCAAACAGAAACAGGCTGCAGTCAGCCATaGTTATGCCACTGCATTCCA +
Preference number: 4 (lower is better)
Translates to: PNPLPLCRLLLSQTQTETGCSQP*LCHCIP
Trigger: TGGAATGCAGTGGCATAATCATGGCTGACTGCAGCC...TGTTTCTGTTTGCGTTTGACTTAGTAGCAACCGACAGAGTGGCAAGGGATTTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515098.5
CDS-3UTR GCA 90 bp AACCAATTCAAGATGCTTTTAAATAGAACATGGACCGAACAGAACATGGTTGTGGCAGCCACCAGGCCGTaGCCAGTCCCTGTGTGTGGT +
Preference number: 4 (lower is better)
Translates to: NQFKMLLNRTWTEQNMVVAATRP*PVPVCG
Trigger: ACCACACACAGGGACTGGGCACGGCCTGGTGGCTGC...CACAACCATGTTCTGTTCGGTCCATGTTCTATTTAAAAGCATCTTGAATTGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313386.9
ENST00000515098.5
CDS-3UTR CCA 90 bp AACCAATTCAAGATGCTTTTAAATAGAACATGGACCGAACAGAACATGGTTGTGCGGCTCTTCGGGGGCTaGGCCGGGACCTATGAGTCT +
Preference number: 4 (lower is better)
Translates to: NQFKMLLNRTWTEQNMVVRLFGG*AGTYES
Trigger: AGACTCATAGGTCCCGGCCCAGCCCCCGAAGAGCCG...CACAACCATGTTCTGTTCGGTCCATGTTCTATTTAAAAGCATCTTGAATTGGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313386.9
ENST00000515098.5
CDS-3UTR CCA 90 bp AACCAATTCAAGATGCTTTTAAATAGAACATGGACCGAACAGAACATGGTTGTGCCCCTCTGTAGGACCTaGGTGCAGCCGCAGGCTCCA +
Preference number: 4 (lower is better)
Translates to: NQFKMLLNRTWTEQNMVVPLCRT*VQPQAP
Trigger: TGGAGCCTGCGGCTGCACCCAGGTCCTACAGAGGGG...CACAACCATGTTCTGTTCGGTCCATGTTCTATTTAAAAGCATCTTGAATTGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313386.9
ENST00000515098.5
CDS-3UTR CCA 90 bp CTTGGGCCGAGGGGCAAGGGTGGACATAGCATTGGCATGGCAGCAAGAGACTTGCTTTTAAATAGAACATaGACCGAACAGAACATGGTT +
Preference number: 4 (lower is better)
Translates to: LGPRGKGGHSIGMAARDLLLNRT*TEQNMV
Trigger: AACCATGTTCTGTTCGGTCCATGTTCTATTTAAAAG...CAAGTCTCTTGCTGCCATGCCAATGCTATGTCCACCCTTGCCCCTCGGCCCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313386.9
ENST00000515098.5
CDS-3UTR TCA 90 bp CCAAATCCCTTGCCACTCTGTCGGTTGCTACTAAGTCAAACGCAAACAGAAACAAGTTCAAGGCTGCAGTaGGCCATGATCATACACCAC +
Preference number: 4 (lower is better)
Translates to: PNPLPLCRLLLSQTQTETSSRLQ*AMIIHH
Trigger: GTGGTGTATGATCATGGCTCACTGCAGCCTTGAACT...TGTTTCTGTTTGCGTTTGACTTAGTAGCAACCGACAGAGTGGCAAGGGATTTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313386.9
ENST00000515098.5
CDS-3UTR GCA 90 bp AACCAATTCAAGATGCTTTTAAATAGAACATGGACCGAACAGAACATGGTTGTGATGGTGGCCTCAGCCTaGTCACTTCCGACCCAGCGC +
Preference number: 4 (lower is better)
Translates to: NQFKMLLNRTWTEQNMVVMVASA*SLPTQR
Trigger: GCGCTGGGTCGGAAGTGAGCAGGCTGAGGCCACCAT...CACAACCATGTTCTGTTCGGTCCATGTTCTATTTAAAAGCATCTTGAATTGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313386.9
CDS-3UTR GCA 90 bp CATTCCGTTCTAACTGGGACTATTTACAGTGGGAGATGGTACATACTGTTGAGGTCCTGTCAATGGCTTTaGCCACTCGGGATACACTGC +
Preference number: 4 (lower is better)
Translates to: HSVLTGTIYSGRWYILLRSCQWL*PLGIHC
Trigger: GCAGTGTATCCCGAGTGGGCAAAGCCATTGACAGGA...CCTCAACAGTATGTACCATCTCCCACTGTAAATAGTCCCAGTTAGAACGGAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313386.9
ENST00000515098.5
ENST00000542098.2
CDS-3UTR GCA 90 bp CAAAGTTATAAAACAACGGCATTCCGTTCTAACTGGGACTATTTACAGTGGGAGAAAGGGCTGCTCCAGTaGTCCCCTCAGTGGAACTCC +
Preference number: 4 (lower is better)
Translates to: QSYKTTAFRSNWDYLQWEKGLLQ*SPQWNS
Trigger: GGAGTTCCACTGAGGGGAGCACTGGAGCAGCCCTTT...CTCCCACTGTAAATAGTCCCAGTTAGAACGGAATGCCGTTGTTTTATAACTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000313386.9
ENST00000515098.5
ENST00000542098.2
CDS-3UTR CCA 90 bp CATTCCGTTCTAACTGGGACTATTTACAGTGGGAGATGGTACATACTGTTGAGGACAGGTGTTCCACGATaGCCATCTGCAGGATCTGCT +
Preference number: 4 (lower is better)
Translates to: HSVLTGTIYSGRWYILLRTGVPR*PSAGSA
Trigger: AGCAGATCCTGCAGATGGCCATCGTGGAACACCTGT...CCTCAACAGTATGTACCATCTCCCACTGTAAATAGTCCCAGTTAGAACGGAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313386.9
ENST00000515098.5
ENST00000542098.2
CDS-3UTR CCA 90 bp CAAAGTTATAAAACAACGGCATTCCGTTCTAACTGGGACTATTTACAGTGGGAGTTCAGCGTTGATTCCTaGCACAGCTCCTCGGCCACG +
Preference number: 4 (lower is better)
Translates to: QSYKTTAFRSNWDYLQWEFSVDS*HSSSAT
Trigger: CGTGGCCGAGGAGCTGTGCCAGGAATCAACGCTGAA...CTCCCACTGTAAATAGTCCCAGTTAGAACGGAATGCCGTTGTTTTATAACTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313386.9
ENST00000515098.5
ENST00000542098.2
CDS-3UTR CCA 90 bp CATTCCGTTCTAACTGGGACTATTTACAGTGGGAGATGGTACATACTGTTGAGGTTCCTGCCTGGACACTaGATACCTGCTGGCCATGTT +
Preference number: 4 (lower is better)
Translates to: HSVLTGTIYSGRWYILLRFLPGH*IPAGHV
Trigger: AACATGGCCAGCAGGTATCCAGTGTCCAGGCAGGAA...CCTCAACAGTATGTACCATCTCCCACTGTAAATAGTCCCAGTTAGAACGGAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313386.9
ENST00000515098.5
CDS-3UTR CCA 90 bp ACCAAATCCCTTGCCACTCTGTCGGTTGCTACTAAGTCAAACGCAAACAGAAACGCTGGGGGTGGATCTTaGGTACCTACAGTATCACTT +
Preference number: 4 (lower is better)
Translates to: TKSLATLSVATKSNANRNAGGGS*VPTVSL
Trigger: AAGTGATACTGTAGGTACCCAAGATCCACCCCCAGC...GTTTCTGTTTGCGTTTGACTTAGTAGCAACCGACAGAGTGGCAAGGGATTTGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313386.9
ENST00000515098.5
CDS-3UTR GCA 90 bp TTGTTCAAAGTTATAAAACAACGGCATTCCGTTCTAACTGGGACTATTTACAGTTGGATCTCCCGCTGGTaGAGCCGAGCAAAGGGCTGG +
Preference number: 4 (lower is better)
Translates to: LFKVIKQRHSVLTGTIYSWISRW*SRAKGW
Trigger: CCAGCCCTTTGCTCGGCTGCACCAGCGGGAGATCCA...ACTGTAAATAGTCCCAGTTAGAACGGAATGCCGTTGTTTTATAACTTTGAACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313386.9
ENST00000515098.5
ENST00000542098.2
CDS-3UTR GCA 90 bp AACCAATTCAAGATGCTTTTAAATAGAACATGGACCGAACAGAACATGGTTGTGCAGACCCCAGTGCACTaGCGCTGCTCAATCACAGCC +
Preference number: 4 (lower is better)
Translates to: NQFKMLLNRTWTEQNMVVQTPVH*RCSITA
Trigger: GGCTGTGATTGAGCAGCGGCAGTGCACTGGGGTCTG...CACAACCATGTTCTGTTCGGTCCATGTTCTATTTAAAAGCATCTTGAATTGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313386.9
ENST00000515098.5
CDS-3UTR GCA 90 bp CAAAGTTATAAAACAACGGCATTCCGTTCTAACTGGGACTATTTACAGTGGGAGTTGGAATCTGACGTCTaGTGGCGGAGGATGGGGCAA +
Preference number: 4 (lower is better)
Translates to: QSYKTTAFRSNWDYLQWELESDV*WRRMGQ
Trigger: TTGCCCCATCCTCCGCCAGCAGACGTCAGATTCCAA...CTCCCACTGTAAATAGTCCCAGTTAGAACGGAATGCCGTTGTTTTATAACTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000313386.9
ENST00000515098.5
ENST00000542098.2
CDS-3UTR GCA 90 bp TCTGAAACCAACCACAGTCCACTGAAGTTGACCACCCTACCGAGACAGACCAAGAATGAGCTTATTGAGTaGATCTCGGGAGATAACATG +
Preference number: 4 (lower is better)
Translates to: SETNHSPLKLTTLPRQTKNELIE*ISGDNM
Trigger: CATGTTATCTCCCGAGATGCACTCAATAAGCTCATT...CTTGGTCTGTCTCGGTAGGGTGGTCAACTTCAGTGGACTGTGGTTGGTTTCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313386.9
ENST00000515098.5
ENST00000542098.2
CDS-3UTR GCA 90 bp ACTGCTGTGAATGTCCTTATGGTCCGAAGCCAGTTTCTGCACCGTATCTTTGATAAGGAGGCCTACAGATaGAGGTACCAACATCCTCAT +
Preference number: 4 (lower is better)
Translates to: TAVNVLMVRSQFLHRIFDKEAYR*RYQHPH
Trigger: ATGAGGATGTTGGTACCTGCATCTGTAGGCCTCCTT...ATCAAAGATACGGTGCAGAAACTGGCTTCGGACCATAAGGACATTCACAGCAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512663.5
CDS-3UTR CCA 90 bp GACTATTTACAGTGGGAGATGGTACATACTGTTGAGGCTGTAGTGGGAGGAAGATCTCGGGAGATAACATaGCCACAGATGAGCTTGATG +
Preference number: 4 (lower is better)
Translates to: DYLQWEMVHTVEAVVGGRSREIT*PQMSLM
Trigger: CATCAAGCTCATCTGTGGCCATGTTATCTCCCGAGA...TCTTCCTCCCACTACAGCCTCAACAGTATGTACCATCTCCCACTGTAAATAGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313386.9
ENST00000515098.5
ENST00000542098.2
CDS-3UTR CCA 90 bp CAAAGTTATAAAACAACGGCATTCCGTTCTAACTGGGACTATTTACAGTGGGAGCCCAGACCCACTTCATaGAAGCCTAAAGCCCCCACA +
Preference number: 4 (lower is better)
Translates to: QSYKTTAFRSNWDYLQWEPRPTS*KPKAPT
Trigger: TGTGGGGGCTTTAGGCTTCCATGAAGTGGGTCTGGG...CTCCCACTGTAAATAGTCCCAGTTAGAACGGAATGCCGTTGTTTTATAACTTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313386.9
ENST00000515098.5
CDS-3UTR TCA 90 bp CATTCCGTTCTAACTGGGACTATTTACAGTGGGAGATGGTACATACTGTTGAGGGCTCAATCACAGCCTTaGTGTTCATCAACACAGGCA +
Preference number: 4 (lower is better)
Translates to: HSVLTGTIYSGRWYILLRAQSQP*CSSTQA
Trigger: TGCCTGTGTTGATGAACATCAAGGCTGTGATTGAGC...CCTCAACAGTATGTACCATCTCCCACTGTAAATAGTCCCAGTTAGAACGGAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313386.9
ENST00000515098.5
ENST00000542098.2
CDS-3UTR TCA 90 bp TTGTTCAAAGTTATAAAACAACGGCATTCCGTTCTAACTGGGACTATTTACAGTGGGAGGGTTGGAATCTaGCGTCTGCTGGCGGAGGAT +
Preference number: 4 (lower is better)
Translates to: LFKVIKQRHSVLTGTIYSGRVGI*RLLAED
Trigger: ATCCTCCGCCAGCAGACGTCAGATTCCAACCCTCCC...ACTGTAAATAGTCCCAGTTAGAACGGAATGCCGTTGTTTTATAACTTTGAACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313386.9
ENST00000515098.5
ENST00000542098.2
CDS-3UTR TCA 90 bp GACTATTTACAGTGGGAGATGGTACATACTGTTGAGGCTGTAGTGGGAGGAAGAACCAAGGCTCACAGGTaGAAACCCCTTTCAACAAAA +
Preference number: 4 (lower is better)
Translates to: DYLQWEMVHTVEAVVGGRTKAHR*KPLSTK
Trigger: TTTTGTTGAAAGGGGTTTTCACCTGTGAGCCTTGGT...TCTTCCTCCCACTACAGCCTCAACAGTATGTACCATCTCCCACTGTAAATAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313386.9
ENST00000515098.5
ENST00000542098.2
CDS-3UTR TCA 90 bp GACTATTTACAGTGGGAGATGGTACATACTGTTGAGGCTGTAGTGGGAGGAAGAGAAATAGCTTGGGCTTaGGGGTCAGATCTGGTTAAA +
Preference number: 4 (lower is better)
Translates to: DYLQWEMVHTVEAVVGGREIAWA*GSDLVK
Trigger: TTTAACCAGATCTGACCCTCAAGCCCAAGCTATTTC...TCTTCCTCCCACTACAGCCTCAACAGTATGTACCATCTCCCACTGTAAATAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313386.9
ENST00000515098.5
CDS-3UTR TCA 90 bp GAAGGATGTCTACTGCTGAAGACCAAATCCCTTGCCACTCTGTCGGTTGCTACTCATGCCTTCAAAGTCTaGTTGAGTTTAAATGATGGC +
Preference number: 4 (lower is better)
Translates to: EGCLLLKTKSLATLSVATHAFKV*LSLNDG
Trigger: GCCATCATTTAAACTCAATCAGACTTTGAAGGCATG...AGTAGCAACCGACAGAGTGGCAAGGGATTTGGTCTTCAGCAGTAGACATCCTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313386.9
ENST00000515098.5
CDS-3UTR GCA 90 bp TCTAACTGGGACTATTTACAGTGGGAGATGGTACATACTGTTGAGGCTGTAGTGCCACTCGGGATACACTaGTGTGAATGTCCTTATGGT +
Preference number: 4 (lower is better)
Translates to: SNWDYLQWEMVHTVEAVVPLGIH*CECPYG
Trigger: ACCATAAGGACATTCACAGCAGTGTATCCCGAGTGG...CACTACAGCCTCAACAGTATGTACCATCTCCCACTGTAAATAGTCCCAGTTAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313386.9
ENST00000515098.5
ENST00000542098.2
CDS-3UTR GCA 90 bp CAAAGTTATAAAACAACGGCATTCCGTTCTAACTGGGACTATTTACAGTGGGAGAAGAGGCGGATGAAGTaGAGTCGGTGCAGCTTGAAC +
Preference number: 4 (lower is better)
Translates to: QSYKTTAFRSNWDYLQWEKRRMK*SRCSLN
Trigger: GTTCAAGCTGCACCGACTGCACTTCATCCGCCTCTT...CTCCCACTGTAAATAGTCCCAGTTAGAACGGAATGCCGTTGTTTTATAACTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313386.9
ENST00000515098.5
ENST00000542098.2
CDS-3UTR CCA 90 bp CATTCCGTTCTAACTGGGACTATTTACAGTGGGAGATGGTACATACTGTTGAGGAGTGAGGCTAAAGGTTaGCCAGGAGAAATGAGAAGG +
Preference number: 4 (lower is better)
Translates to: HSVLTGTIYSGRWYILLRSEAKG*PGEMRR
Trigger: CCTTCTCATTTCTCCTGGCCAACCTTTAGCCTCACT...CCTCAACAGTATGTACCATCTCCCACTGTAAATAGTCCCAGTTAGAACGGAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313386.9
ENST00000515098.5
CDS-3UTR GCA 90 bp AACCAATTCAAGATGCTTTTAAATAGAACATGGACCGAACAGAACATGGTTGTGTCCACGATGGCCATCTaGAGGATCTGCTGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: NQFKMLLNRTWTEQNMVVSTMAI*RICCCC
Trigger: ACAGCAGCAGCAGATCCTGCAGATGGCCATCGTGGA...CACAACCATGTTCTGTTCGGTCCATGTTCTATTTAAAAGCATCTTGAATTGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313386.9
ENST00000515098.5
CDS-3UTR GCA 90 bp AACCAATTCAAGATGCTTTTAAATAGAACATGGACCGAACAGAACATGGTTGTGCCAGTGCACTGCCGCTaGTCAATCACAGCCTTGATG +
Preference number: 4 (lower is better)
Translates to: NQFKMLLNRTWTEQNMVVPVHCR*SITALM
Trigger: CATCAAGGCTGTGATTGAGCAGCGGCAGTGCACTGG...CACAACCATGTTCTGTTCGGTCCATGTTCTATTTAAAAGCATCTTGAATTGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313386.9
ENST00000515098.5
CDS-3UTR CCA 90 bp GACTATTTACAGTGGGAGATGGTACATACTGTTGAGGCTGTAGTGGGAGGAAGAATTTACAGTGGGAGATaGTACATACTGTTGAGGCTG +
Preference number: 4 (lower is better)
Translates to: DYLQWEMVHTVEAVVGGRIYSGR*YILLRL
Trigger: CAGCCTCAACAGTATGTACCATCTCCCACTGTAAAT...TCTTCCTCCCACTACAGCCTCAACAGTATGTACCATCTCCCACTGTAAATAGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313386.9
ENST00000515098.5
ENST00000542098.2
CDS-3UTR CCA 90 bp GCCCTGTTGTGCAAGTTACTTCATTTTCCTGAATCCCATTACACGGATTTCTCCGCATTCCGTTCTAACTaGGACTATTTACAGTGGGAG +
Preference number: 4 (lower is better)
Translates to: ALLCKLLHFPESHYTDFSAFRSN*DYLQWE
Trigger: CTCCCACTGTAAATAGTCCCAGTTAGAACGGAATGC...GGAGAAATCCGTGTAATGGGATTCAGGAAAATGAAGTAACTTGCACAACAGGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313386.9
ENST00000515098.5
CDS-3UTR TCA 90 bp TTGTTCAAAGTTATAAAACAACGGCATTCCGTTCTAACTGGGACTATTTACAGTCTGAGCATGCCCTGCTaGTACAGGTGTTCCACGATG +
Preference number: 4 (lower is better)
Translates to: LFKVIKQRHSVLTGTIYSLSMPC*YRCSTM
Trigger: CATCGTGGAACACCTGTATCAGCAGGGCATGCTCAG...ACTGTAAATAGTCCCAGTTAGAACGGAATGCCGTTGTTTTATAACTTTGAACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313386.9
ENST00000515098.5
ENST00000542098.2
CDS-3UTR GCA 90 bp TCTAACTGGGACTATTTACAGTGGGAGATGGTACATACTGTTGAGGCTGTAGTGAACTCTAGGAAAGGCTaGTTGAAATCCAAGTCCACA +
Preference number: 4 (lower is better)
Translates to: SNWDYLQWEMVHTVEAVVNSRKG*LKSKST
Trigger: TGTGGACTTGGATTTCAAGCAGCCTTTCCTAGAGTT...CACTACAGCCTCAACAGTATGTACCATCTCCCACTGTAAATAGTCCCAGTTAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313386.9
ENST00000515098.5
ENST00000542098.2
CDS-3UTR CCA 90 bp AACCAATTCAAGATGCTTTTAAATAGAACATGGACCGAACAGAACATGGTTGTGACAGGTGTTCCACGATaGCCATCTGCAGGATCTGCT +
Preference number: 4 (lower is better)
Translates to: NQFKMLLNRTWTEQNMVVTGVPR*PSAGSA
Trigger: AGCAGATCCTGCAGATGGCCATCGTGGAACACCTGT...CACAACCATGTTCTGTTCGGTCCATGTTCTATTTAAAAGCATCTTGAATTGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313386.9
ENST00000515098.5
CDS-3UTR TCA 90 bp TTGTTCAAAGTTATAAAACAACGGCATTCCGTTCTAACTGGGACTATTTACAGTTCTGCACCGTATCTTTaGTCTTCCGGCAGCACTGTG +
Preference number: 4 (lower is better)
Translates to: LFKVIKQRHSVLTGTIYSSAPYL*SSGSTV
Trigger: CACAGTGCTGCCGGAAGATCAAAGATACGGTGCAGA...ACTGTAAATAGTCCCAGTTAGAACGGAATGCCGTTGTTTTATAACTTTGAACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313386.9
ENST00000515098.5
ENST00000542098.2
CDS-3UTR GCA 90 bp GCCCTGTTGTGCAAGTTACTTCATTTTCCTGAATCCCATTACACGGATTTCTCCAATGAGCTTATTGAGTaGATCTCGGGAGATAACATG +
Preference number: 4 (lower is better)
Translates to: ALLCKLLHFPESHYTDFSNELIE*ISGDNM
Trigger: CATGTTATCTCCCGAGATGCACTCAATAAGCTCATT...GGAGAAATCCGTGTAATGGGATTCAGGAAAATGAAGTAACTTGCACAACAGGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313386.9
ENST00000515098.5
CDS-3UTR TCA 90 bp AACCAATTCAAGATGCTTTTAAATAGAACATGGACCGAACAGAACATGGTTGTGGAAATAGCTTGGGCTTaGGGGTCAGATCTGGTTAAA +
Preference number: 4 (lower is better)
Translates to: NQFKMLLNRTWTEQNMVVEIAWA*GSDLVK
Trigger: TTTAACCAGATCTGACCCTCAAGCCCAAGCTATTTC...CACAACCATGTTCTGTTCGGTCCATGTTCTATTTAAAAGCATCTTGAATTGGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313386.9
ENST00000515098.5
CDS-3UTR CCA 90 bp AACCAATTCAAGATGCTTTTAAATAGAACATGGACCGAACAGAACATGGTTGTGATTTACAGTGGGAGATaGTACATACTGTTGAGGCTG +
Preference number: 4 (lower is better)
Translates to: NQFKMLLNRTWTEQNMVVIYSGR*YILLRL
Trigger: CAGCCTCAACAGTATGTACCATCTCCCACTGTAAAT...CACAACCATGTTCTGTTCGGTCCATGTTCTATTTAAAAGCATCTTGAATTGGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313386.9
ENST00000515098.5
CDS-3UTR CCA 90 bp TTGTTCAAAGTTATAAAACAACGGCATTCCGTTCTAACTGGGACTATTTACAGTTACAGTATCACTTCTTaGGATAAAGCAGGAGGCCCT +
Preference number: 4 (lower is better)
Translates to: LFKVIKQRHSVLTGTIYSYSITS*DKAGGP
Trigger: AGGGCCTCCTGCTTTATCCCAAGAAGTGATACTGTA...ACTGTAAATAGTCCCAGTTAGAACGGAATGCCGTTGTTTTATAACTTTGAACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313386.9
ENST00000515098.5
CDS-3UTR CCA 90 bp TTGTTCAAAGTTATAAAACAACGGCATTCCGTTCTAACTGGGACTATTTACAGTATTTACAGTGGGAGATaGTACATACTGTTGAGGCTG +
Preference number: 4 (lower is better)
Translates to: LFKVIKQRHSVLTGTIYSIYSGR*YILLRL
Trigger: CAGCCTCAACAGTATGTACCATCTCCCACTGTAAAT...ACTGTAAATAGTCCCAGTTAGAACGGAATGCCGTTGTTTTATAACTTTGAACAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313386.9
ENST00000515098.5
ENST00000542098.2
CDS-3UTR CCA 90 bp AACCAATTCAAGATGCTTTTAAATAGAACATGGACCGAACAGAACATGGTTGTGCTTTTAAATAGAACATaGACCGAACAGAACATGGTT +
Preference number: 4 (lower is better)
Translates to: NQFKMLLNRTWTEQNMVVLLNRT*TEQNMV
Trigger: AACCATGTTCTGTTCGGTCCATGTTCTATTTAAAAG...CACAACCATGTTCTGTTCGGTCCATGTTCTATTTAAAAGCATCTTGAATTGGTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313386.9
ENST00000515098.5
CDS CCA 90 bp GTCTCCCATGTCCTCAGGGAGGCTGTCGCAGGGCACTTGCAAGGGTaGCCACCCACCTGCGCTGGCCAGCTCAGCCCGCAGCTGGCCCAC +
Preference number: 5 (lower is better)
Translates to: VSHVLREAVAGHLQG*PPTCAGQLSPQLAH
Trigger: GTGGGCCAGCTGCGGGCTGAGCTGGCCAGCGCAGGTGGGTGGCCACCCTTGCAAGTGCCCTGCGACAGCCTCCCTGAGGACATGGGAGAC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512663.5
CDS TCA 90 bp CCCGCTGGTGCAGCCGAGCAAAGGGCTGGAAGTGCCGAGCATAGCTaGGGGCCTCCAGCTGCTTCGCGGGGCCTCCTGCCAAGAGGCGGA +
Preference number: 5 (lower is better)
Translates to: PAGAAEQRAGSAEHS*GPPAASRGLLPRGG
Trigger: TCCGCCTCTTGGCAGGAGGCCCCGCGAAGCAGCTGGAGGCCCTCAGCTATGCTCGGCACTTCCAGCCCTTTGCTCGGCTGCACCAGCGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313386.9
ENST00000507575.5
ENST00000513162.5
ENST00000515098.5
ENST00000515360.5
ENST00000542098.2
CDS GCA 90 bp AGCTTCGGGTCTCCCATGTCCTCAGGGAGGCTGTCGCAGGGCACTTaGAAGGGTGGCCACCCACCTGCGCTGGCCAGCTCAGCCCGCAGC +
Preference number: 5 (lower is better)
Translates to: SFGSPMSSGRLSQGT*KGGHPPALASSARS
Trigger: GCTGCGGGCTGAGCTGGCCAGCGCAGGTGGGTGGCCACCCTTGCAAGTGCCCTGCGACAGCCTCCCTGAGGACATGGGAGACCCGAAGCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512663.5
CDS GCA 90 bp GTGCCGAGCATAGCTGAGGGCCTCCAGCTGCTTCGCGGGGCCTCCTaGCAAGAGGCGGATGAAGTGCAGTCGGTGCAGCTTGAACTCCAG +
Preference number: 5 (lower is better)
Translates to: VPSIAEGLQLLRGAS*QEADEVQSVQLELQ
Trigger: CTGGAGTTCAAGCTGCACCGACTGCACTTCATCCGCCTCTTGGCAGGAGGCCCCGCGAAGCAGCTGGAGGCCCTCAGCTATGCTCGGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313386.9
ENST00000507575.5
ENST00000513162.5
ENST00000515098.5
ENST00000515360.5
ENST00000542098.2
CDS GCA 90 bp TGCTTCGCGGGGCCTCCTGCCAAGAGGCGGATGAAGTGCAGTCGGTaGAGCTTGAACTCCAGGGAGCTGTTGAGTTCCAGCAGGCGCTGC +
Preference number: 5 (lower is better)
Translates to: CFAGPPAKRRMKCSR*SLNSRELLSSSRRC
Trigger: GCAGCGCCTGCTGGAACTCAACAGCTCCCTGGAGTTCAAGCTGCACCGACTGCACTTCATCCGCCTCTTGGCAGGAGGCCCCGCGAAGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313386.9
ENST00000507575.5
ENST00000513162.5
ENST00000515098.5
ENST00000515360.5
ENST00000542098.2
CDS GCA 90 bp GCCTCCAGCTGCTTCGCGGGGCCTCCTGCCAAGAGGCGGATGAAGTaGAGTCGGTGCAGCTTGAACTCCAGGGAGCTGTTGAGTTCCAGC +
Preference number: 5 (lower is better)
Translates to: ASSCFAGPPAKRRMK*SRCSLNSRELLSSS
Trigger: GCTGGAACTCAACAGCTCCCTGGAGTTCAAGCTGCACCGACTGCACTTCATCCGCCTCTTGGCAGGAGGCCCCGCGAAGCAGCTGGAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313386.9
ENST00000507575.5
ENST00000513162.5
ENST00000515098.5
ENST00000515360.5
ENST00000542098.2
CDS GCA 90 bp GGCAGTAGGGTGACTTCTCCAAGCCCAGCCGCAGGTACACCAGGCTaGCCATCATCACCTGGATCTCCCGCTGGTGCAGCCGAGCAAAGG +
Preference number: 5 (lower is better)
Translates to: GSRVTSPSPAAGTPG*PSSPGSPAGAAEQR
Trigger: CCTTTGCTCGGCTGCACCAGCGGGAGATCCAGGTGATGATGGGCAGCCTGGTGTACCTGCGGCTGGGCTTGGAGAAGTCACCCTACTGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313386.9
ENST00000507575.5
ENST00000513162.5
ENST00000515098.5
ENST00000515360.5
ENST00000542098.2
CDS-3UTR CAA 90 bp CCGAGGGGCAAGGGTGGACATAGCATTGGCATGGCAGCAAGAGACTTGGCTGAGCACCGCTGGACACTCTaGGGCCGAGGGGCAAGGGTG +
Preference number: 5 (lower is better)
Translates to: PRGKGGHSIGMAARDLAEHRWTL*GRGARV
Trigger: CACCCTTGCCCCTCGGCCCAAGAGTGTCCAGCGGTG...CTCAGCCAAGTCTCTTGCTGCCATGCCAATGCTATGTCCACCCTTGCCCCTCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000313386.9
ENST00000515098.5
ENST00000542098.2
CDS GCA 90 bp CGGTGCAGCTTGAACTCCAGGGAGCTGTTGAGTTCCAGCAGGCGCTaGCTGTGGGAGACGGCCCATTCCAACGCAGGACCCAGGTCTTGT +
Preference number: 5 (lower is better)
Translates to: RCSLNSRELLSSSRR*LWETAHSNAGPRSC
Trigger: ACAAGACCTGGGTCCTGCGTTGGAATGGGCCGTCTCCCACAGGCAGCGCCTGCTGGAACTCAACAGCTCCCTGGAGTTCAAGCTGCACCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313386.9
ENST00000515098.5
ENST00000515360.5
ENST00000542098.2
CDS CCA 90 bp TTCTCCAAGCCCAGCCGCAGGTACACCAGGCTGCCCATCATCACCTaGATCTCTACAAGGCAACCAGAGGGGGCAGCTCAGGGGGTGCAG +
Preference number: 5 (lower is better)
Translates to: FSKPSRRYTRLPIIT*ISTRQPEGAAQGVQ
Trigger: CTGCACCCCCTGAGCTGCCCCCTCTGGTTGCCTTGTAGAGATCCAGGTGATGATGGGCAGCCTGGTGTACCTGCGGCTGGGCTTGGAGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000507937.1
CDS-3UTR CAA 90 bp GAGGAAGAGGTGGGCCACCGCTGGACACTCTTGGGCCGAGGGGCAAGGGTGGACAGTCCACATTCAGCGTaGATTCCTGGCACAGCTCCT +
Preference number: 5 (lower is better)
Translates to: EEEVGHRWTLLGRGARVDSPHSA*IPGTAP
Trigger: AGGAGCTGTGCCAGGAATCAACGCTGAATGTGGACT...GTCCACCCTTGCCCCTCGGCCCAAGAGTGTCCAGCGGTGGCCCACCTCTTCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313386.9
ENST00000515098.5
ENST00000542098.2
CDS-3UTR CAA 90 bp GAGGAAGAGGTGGGCCACCGCTGGACACTCTTGGGCCGAGGGGCAAGGGTGGACTGGCCACAGATGAGCTaGATGGGAGGGTTGGAATCT +
Preference number: 5 (lower is better)
Translates to: EEEVGHRWTLLGRGARVDWPQMS*MGGLES
Trigger: AGATTCCAACCCTCCCATCAAGCTCATCTGTGGCCA...GTCCACCCTTGCCCCTCGGCCCAAGAGTGTCCAGCGGTGGCCCACCTCTTCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313386.9
ENST00000515098.5
ENST00000542098.2
CDS-3UTR CAA 90 bp AAGGACTCAGAGGGTTCTGTGCTGATGCTCAGCTGCCCAGGGCCGGGTGCTTTGGGTTGGGCCAGCGAGTaGGTGGGCGGGAAGAGTGAA +
Preference number: 5 (lower is better)
Translates to: KDSEGSVLMLSCPGPGALGWASE*VGGKSE
Trigger: TTCACTCTTCCCGCCCACCAACTCGCTGGCCCAACC...CAAAGCACCCGGCCCTGGGCAGCTGAGCATCAGCACAGAACCCTCTGAGTCCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313386.9
ENST00000515098.5
CDS-3UTR CAA 90 bp GGCCGAGGGGCAAGGGTGGACATAGCATTGGCATGGCAGCAAGAGACTTGGCTGGGTTGGGCCAGCGAGTaGGTGGGCGGGAAGAGTGAA +
Preference number: 5 (lower is better)
Translates to: GRGARVDIALAWQQETWLGWASE*VGGKSE
Trigger: TTCACTCTTCCCGCCCACCAACTCGCTGGCCCAACC...CAGCCAAGTCTCTTGCTGCCATGCCAATGCTATGTCCACCCTTGCCCCTCGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313386.9
ENST00000515098.5
CDS-3UTR CAA 90 bp TCTGCTGCTGCTGTTCCCGCGCGTCCCACACCGCATCTGACACAACACCACAGAACGAGGACTGGACGTTaGAGTCCGAGCAACTCCCCC +
Preference number: 5 (lower is better)
Translates to: SAAAVPARPTPHLTQHHRTRTGR*SPSNSP
Trigger: GGGGGAGTTGCTCGGACTCAAACGTCCAGTCCTCGT...TCTGTGGTGTTGTGTCAGATGCGGTGTGGGACGCGCGGGAACAGCAGCAGCAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512663.5
CDS-3UTR CAA 90 bp CACTGGATACCTGCTGGCCATGTTTTTGTTTGCGGCAGCCACCAGGCCGTGCCCACGAGGACTGGACGTTaGAGTCCGAGCAACTCCCCC +
Preference number: 5 (lower is better)
Translates to: HWIPAGHVFVCGSHQAVPTRTGR*SPSNSP
Trigger: GGGGGAGTTGCTCGGACTCAAACGTCCAGTCCTCGT...GGGCACGGCCTGGTGGCTGCCGCAAACAAAAACATGGCCAGCAGGTATCCAGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313386.9
ENST00000515098.5
CDS-3UTR CAA 90 bp GTAGTGGGAGGAAGAGGTGGGCCACCGCTGGACACTCTTGGGCCGAGGGGCAAGTTCCTGTCAATGGCTTaGCCCACTCGGGATACACTG +
Preference number: 5 (lower is better)
Translates to: VVGGRGGPPLDTLGPRGKFLSMA*PTRDTL
Trigger: CAGTGTATCCCGAGTGGGCAAAGCCATTGACAGGAA...CTTGCCCCTCGGCCCAAGAGTGTCCAGCGGTGGCCCACCTCTTCCTCCCACTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313386.9
ENST00000515098.5
ENST00000542098.2
CDS-3UTR CAA 90 bp GAGGTGGGCCACCGCTGGACACTCTTGGGCCGAGGGGCAAGGGTGGACATAGCAAGTCCACATTCAGCGTaGATTCCTGGCACAGCTCCT +
Preference number: 5 (lower is better)
Translates to: EVGHRWTLLGRGARVDIASPHSA*IPGTAP
Trigger: AGGAGCTGTGCCAGGAATCAACGCTGAATGTGGACT...TGCTATGTCCACCCTTGCCCCTCGGCCCAAGAGTGTCCAGCGGTGGCCCACCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313386.9
ENST00000515098.5
ENST00000542098.2
CDS-3UTR CAA 90 bp TGCCAAAGGGCTGCTCCAGTGCTCCCCTCAGTGGAACTCCTCAGCCAGGCGCTCAGCTTGATGGGAGGGTaGGAATCTGACGTCTGCTGG +
Preference number: 5 (lower is better)
Translates to: CQRAAPVLPSVELLSQALSLMGG*ESDVCW
Trigger: CCAGCAGACGTCAGATTCCAACCCTCCCATCAAGCT...GAGCGCCTGGCTGAGGAGTTCCACTGAGGGGAGCACTGGAGCAGCCCTTTGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313386.9
ENST00000515098.5
ENST00000542098.2
CDS-3UTR CAA 90 bp GGCTGCTCCAGTGCTCCCCTCAGTGGAACTCCTCAGCCAGGCGCTCTGAAACCACTGCTGGCCATGTTTTaGTTTGCGGCAGCCACCAGG +
Preference number: 5 (lower is better)
Translates to: GCSSAPLSGTPQPGALKPLLAMF*FAAATR
Trigger: CCTGGTGGCTGCCGCAAACAAAAACATGGCCAGCAG...TGGTTTCAGAGCGCCTGGCTGAGGAGTTCCACTGAGGGGAGCACTGGAGCAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313386.9
ENST00000515098.5
CDS-3UTR CAA 90 bp AAGCTCCCCGCAGTCAGGGATGCAAGTTGTGTTCTTCCTGCCTGGACACTGGATGGGACGGAGGACTGCTaGAGCCCGGGAGGTCAAGGC +
Preference number: 5 (lower is better)
Translates to: KLPAVRDASCVLPAWTLDGTEDC*SPGGQG
Trigger: GCCTTGACCTCCCGGGCTCAAGCAGTCCTCCGTCCC...ATCCAGTGTCCAGGCAGGAAGAACACAACTTGCATCCCTGACTGCGGGGAGCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515098.5
CDS-3UTR CAA 90 bp GCCAAAGGGCTGCTCCAGTGCTCCCCTCAGTGGAACTCCTCAGCCAGGCGCTCTAGTCCACATTCAGCGTaGATTCCTGGCACAGCTCCT +
Preference number: 5 (lower is better)
Translates to: AKGLLQCSPQWNSSARRSSPHSA*IPGTAP
Trigger: AGGAGCTGTGCCAGGAATCAACGCTGAATGTGGACT...AGAGCGCCTGGCTGAGGAGTTCCACTGAGGGGAGCACTGGAGCAGCCCTTTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313386.9
ENST00000515098.5
ENST00000542098.2
CDS-3UTR CAA 90 bp AGCCTCTGCCAAAGGGCTGCTCCAGTGCTCCCCTCAGTGGAACTCCTCAGCCAGAGCTTGATGGGAGGGTaGGAATCTGACGTCTGCTGG +
Preference number: 5 (lower is better)
Translates to: SLCQRAAPVLPSVELLSQSLMGG*ESDVCW
Trigger: CCAGCAGACGTCAGATTCCAACCCTCCCATCAAGCT...CTGGCTGAGGAGTTCCACTGAGGGGAGCACTGGAGCAGCCCTTTGGCAGAGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313386.9
ENST00000515098.5
ENST00000542098.2
CDS-3UTR CAA 90 bp TCTCCCTTTCCTTATGCCATGGAGCCAGGTGCCAGGCGTGGGCTGGTCCATCTCCTGCTGGCCATGTTTTaGTTTGCGGCAGCCACCAGG +
Preference number: 5 (lower is better)
Translates to: SPFPYAMEPGARRGLVHLLLAMF*FAAATR
Trigger: CCTGGTGGCTGCCGCAAACAAAAACATGGCCAGCAG...GAGATGGACCAGCCCACGCCTGGCACCTGGCTCCATGGCATAAGGAAAGGGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313386.9
ENST00000515098.5
CDS TCA 90 bp CAGTTGCCCAAGGTCAGGCGTCTGGGAAGTGGAGGAGCTGGGAACTaGACTGAAGCCAGACAGTCTGGCTCTGGCCTCAGAGTCCTTCTC +
Preference number: 5 (lower is better)
Translates to: QLPKVRRLGSGGAGN*TEARQSGSGLRVLL
Trigger: GAGAAGGACTCTGAGGCCAGAGCCAGACTGTCTGGCTTCAGTTCAGTTCCCAGCTCCTCCACTTCCCAGACGCCTGACCTTGGGCAACTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508647.5
CDS GCA 90 bp ACATGGCCACAGATGAGCTTGATGGGAGGGTTGGAATCTGACGTCTaGTGGCGGAGGATGGGGCAAGCGAACACGGAGTGGTACCAGCAC +
Preference number: 5 (lower is better)
Translates to: TWPQMSLMGGLESDV*WRRMGQANTEWYQH
Trigger: GTGCTGGTACCACTCCGTGTTCGCTTGCCCCATCCTCCGCCAGCAGACGTCAGATTCCAACCCTCCCATCAAGCTCATCTGTGGCCATGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000313386.9
ENST00000507575.5
ENST00000507937.1
ENST00000513162.5
ENST00000515098.5
ENST00000515360.5
ENST00000542098.2
CDS GCA 90 bp CGGAGTGTGTGGCTCTGGGGTCAGGTTCAAGTGCCCATTATTCCCTaGGAGGCCTTGGGCAAGTGCGTGCACATCTTGGGCCTCCATTTC +
Preference number: 5 (lower is better)
Translates to: RSVWLWGQVQVPIIP*EALGKCVHILGLHF
Trigger: GAAATGGAGGCCCAAGATGTGCACGCACTTGCCCAAGGCCTCGCAGGGAATAATGGGCACTTGAACCTGACCCCAGAGCCACACACTCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507937.1
CDS GCA 90 bp GAGAGAGGGGTCCCCTGGAGGGCCGGTTTCAAGGAGGCCTACAGATaGAGGTACCAACATCCTCATCATCGTCCTTCCGGAACCCTGTCA +
Preference number: 5 (lower is better)
Translates to: ERGVPWRAGFKEAYR*RYQHPHHRPSGTLS
Trigger: TGACAGGGTTCCGGAAGGACGATGATGAGGATGTTGGTACCTGCATCTGTAGGCCTCCTTGAAACCGGCCCTCCAGGGGACCCCTCTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512663.5
CDS CCA 90 bp CACACAGCCAGAGGCAAAGCTGCAGACAAGGAACAGGGGCTAGAGTaGCTCAGATCACAGCAGACAGGCAAAAAGGGCCAGCGCGCCATG +
Preference number: 5 (lower is better)
Translates to: HTARGKAADKEQGLE*LRSQQTGKKGQRAM
Trigger: CATGGCGCGCTGGCCCTTTTTGCCTGTCTGCTGTGATCTGAGCCACTCTAGCCCCTGTTCCTTGTCTGCAGCTTTGCCTCTGGCTGTGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000507937.1
CDS-3UTR CAA 90 bp TCTCCCTTTCCTTATGCCATGGAGCCAGGTGCCAGGCGTGGGCTGGTCCATCTCCACAGTCCACTGAAGTaGACCACCCTACCGAGACAG +
Preference number: 5 (lower is better)
Translates to: SPFPYAMEPGARRGLVHLHSPLK*TTLPRQ
Trigger: CTGTCTCGGTAGGGTGGTCAACTTCAGTGGACTGTG...GAGATGGACCAGCCCACGCCTGGCACCTGGCTCCATGGCATAAGGAAAGGGAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313386.9
ENST00000515098.5
ENST00000542098.2
CDS-3UTR CAA 90 bp GGCCGAGGGGCAAGGGTGGACATAGCATTGGCATGGCAGCAAGAGACTTGGCTGCACAGTCCACTGAAGTaGACCACCCTACCGAGACAG +
Preference number: 5 (lower is better)
Translates to: GRGARVDIALAWQQETWLHSPLK*TTLPRQ
Trigger: CTGTCTCGGTAGGGTGGTCAACTTCAGTGGACTGTG...CAGCCAAGTCTCTTGCTGCCATGCCAATGCTATGTCCACCCTTGCCCCTCGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313386.9
ENST00000515098.5
ENST00000542098.2
CDS-3UTR CAA 90 bp TCTCCCTTTCCTTATGCCATGGAGCCAGGTGCCAGGCGTGGGCTGGTCCATCTCGGCTGGGGGTGGATCTaGGGTACCTACAGTATCACT +
Preference number: 5 (lower is better)
Translates to: SPFPYAMEPGARRGLVHLGWGWI*GTYSIT
Trigger: AGTGATACTGTAGGTACCCAAGATCCACCCCCAGCC...GAGATGGACCAGCCCACGCCTGGCACCTGGCTCCATGGCATAAGGAAAGGGAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313386.9
ENST00000515098.5
CDS-3UTR CAA 90 bp AAGGACTCAGAGGGTTCTGTGCTGATGCTCAGCTGCCCAGGGCCGGGTGCTTTGGGCTGGGGGTGGATCTaGGGTACCTACAGTATCACT +
Preference number: 5 (lower is better)
Translates to: KDSEGSVLMLSCPGPGALGWGWI*GTYSIT
Trigger: AGTGATACTGTAGGTACCCAAGATCCACCCCCAGCC...CAAAGCACCCGGCCCTGGGCAGCTGAGCATCAGCACAGAACCCTCTGAGTCCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313386.9
ENST00000515098.5
CDS TCA 90 bp CTGCAGGATCTGCTGCTGCTGTTCCCGCGCGTCCCACACCGCATCTaGCACAACACCACAGATCTCAGAGTCGAAGTTCTGACGAAGGAG +
Preference number: 5 (lower is better)
Translates to: LQDLLLLFPRVPHRI*HNTTDLRVEVLTKE
Trigger: CTCCTTCGTCAGAACTTCGACTCTGAGATCTGTGGTGTTGTGTCAGATGCGGTGTGGGACGCGCGGGAACAGCAGCAGCAGATCCTGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507575.5
ENST00000513162.5
CDS-3UTR CAA 90 bp GTTCCCGCGCGTCCCACACCGCATCTGACACAACACCACAGATCTCAGAGTCGAAACTTCTGCAGGACCTaGTCCAGCTCTCTCTCCACG +
Preference number: 5 (lower is better)
Translates to: VPARPTPHLTQHHRSQSRNFCRT*SSSLST
Trigger: CGTGGAGAGAGAGCTGGACAAGGTCCTGCAGAAGTT...TCGACTCTGAGATCTGTGGTGTTGTGTCAGATGCGGTGTGGGACGCGCGGGAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512663.5
ENST00000512811.5
CDS-3UTR CAA 90 bp GAGGAAGAGGTGGGCCACCGCTGGACACTCTTGGGCCGAGGGGCAAGGGTGGACCCATTAATGAGCTTATaGAGTGCATCTCGGGAGATA +
Preference number: 5 (lower is better)
Translates to: EEEVGHRWTLLGRGARVDPLMSL*SASREI
Trigger: TATCTCCCGAGATGCACTCAATAAGCTCATTAATGG...GTCCACCCTTGCCCCTCGGCCCAAGAGTGTCCAGCGGTGGCCCACCTCTTCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313386.9
ENST00000515098.5
ENST00000542098.2
CDS-3UTR CAA 90 bp TCTCCCTTTCCTTATGCCATGGAGCCAGGTGCCAGGCGTGGGCTGGTCCATCTCAGGGTGGACATAGCATaGGCATGGCAGCAAGAGACT +
Preference number: 5 (lower is better)
Translates to: SPFPYAMEPGARRGLVHLRVDIA*AWQQET
Trigger: AGTCTCTTGCTGCCATGCCAATGCTATGTCCACCCT...GAGATGGACCAGCCCACGCCTGGCACCTGGCTCCATGGCATAAGGAAAGGGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313386.9
ENST00000515098.5
ENST00000542098.2
CDS-3UTR CAA 90 bp GAAGGATGTCTACTGCTGAAGACCAAATCCCTTGCCACTCTGTCGGTTGCTACTCACCGCTGGACACTCTaGGGCCGAGGGGCAAGGGTG +
Preference number: 5 (lower is better)
Translates to: EGCLLLKTKSLATLSVATHRWTL*GRGARV
Trigger: CACCCTTGCCCCTCGGCCCAAGAGTGTCCAGCGGTG...AGTAGCAACCGACAGAGTGGCAAGGGATTTGGTCTTCAGCAGTAGACATCCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313386.9
ENST00000515098.5
ENST00000542098.2
CDS-3UTR CAA 90 bp TCTCCCTTTCCTTATGCCATGGAGCCAGGTGCCAGGCGTGGGCTGGTCCATCTCCTGGTGGGTCATCAGTaGGTGACTTCCTGGCATACA +
Preference number: 5 (lower is better)
Translates to: SPFPYAMEPGARRGLVHLLVGHQ*VTSWHT
Trigger: TGTATGCCAGGAAGTCACCAACTGATGACCCACCAG...GAGATGGACCAGCCCACGCCTGGCACCTGGCTCCATGGCATAAGGAAAGGGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313386.9
ENST00000515098.5
CDS TCA 90 bp GGAGATAACATGGCCACAGATGAGCTTGATGGGAGGGTTGGAATCTaGCGTCTGCTGGCGGAGGATGGGGCAAGCGAACACGGAGTGGTA +
Preference number: 5 (lower is better)
Translates to: GDNMATDELDGRVGI*RLLAEDGASEHGVV
Trigger: TACCACTCCGTGTTCGCTTGCCCCATCCTCCGCCAGCAGACGTCAGATTCCAACCCTCCCATCAAGCTCATCTGTGGCCATGTTATCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000313386.9
ENST00000507575.5
ENST00000507937.1
ENST00000513162.5
ENST00000515098.5
ENST00000515360.5
ENST00000542098.2
CDS GCA 90 bp CTGTGGGAGACGGCCCATTCCAACGCAGGACCCAGGTCTTGTTCGTaGAGGGCTTCCAGGATTCGATTCAACTCTAGGAAAGGCTGCTTG +
Preference number: 5 (lower is better)
Translates to: LWETAHSNAGPRSCS*RASRIRFNSRKGCL
Trigger: CAAGCAGCCTTTCCTAGAGTTGAATCGAATCCTGGAAGCCCTGCACGAACAAGACCTGGGTCCTGCGTTGGAATGGGCCGTCTCCCACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313386.9
ENST00000515098.5
ENST00000515360.5
ENST00000542098.2
CDS CCA 90 bp GGCTCTGGGGTCAGGTTCAAGTGCCCATTATTCCCTGCGAGGCCTTaGGCAAGTGCGTGCACATCTTGGGCCTCCATTTCCTCATCTGTA +
Preference number: 5 (lower is better)
Translates to: GSGVRFKCPLFPARP*ASACTSWASISSSV
Trigger: TACAGATGAGGAAATGGAGGCCCAAGATGTGCACGCACTTGCCCAAGGCCTCGCAGGGAATAATGGGCACTTGAACCTGACCCCAGAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507937.1
CDS-3UTR CAA 90 bp GCTGTTCCCGCGCGTCCCACACCGCATCTGACACAACACCACAGATCTCAGAGTTTCCTGTCAATGGCTTaGCCCACTCGGGATACACTG +
Preference number: 5 (lower is better)
Translates to: AVPARPTPHLTQHHRSQSFLSMA*PTRDTL
Trigger: CAGTGTATCCCGAGTGGGCAAAGCCATTGACAGGAA...ACTCTGAGATCTGTGGTGTTGTGTCAGATGCGGTGTGGGACGCGCGGGAACAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512663.5
ENST00000512811.5
CDS-3UTR CAA 90 bp CCCGCGCGTCCCACACCGCATCTGACACAACACCACAGATCTCAGAGTCGAAGTAGTCCACATTCAGCGTaGATTCCTGGCACAGCTCCT +
Preference number: 5 (lower is better)
Translates to: PARPTPHLTQHHRSQSRSSPHSA*IPGTAP
Trigger: AGGAGCTGTGCCAGGAATCAACGCTGAATGTGGACT...ACTTCGACTCTGAGATCTGTGGTGTTGTGTCAGATGCGGTGTGGGACGCGCGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512811.5
CDS-3UTR CAA 90 bp GTTGACCACCCTACCGAGACAGACCAAGGCTCACAGGTGAAAACCCCTTTCAACAACTCCAGGGAGCTGTaGAGTTCCAGCAGGCGCTGC +
Preference number: 5 (lower is better)
Translates to: VDHPTETDQGSQVKTPFNNSREL*SSSRRC
Trigger: GCAGCGCCTGCTGGAACTCAACAGCTCCCTGGAGTT...GTTGAAAGGGGTTTTCACCTGTGAGCCTTGGTCTGTCTCGGTAGGGTGGTCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000313386.9
ENST00000515098.5
ENST00000542098.2
CDS-3UTR CAA 90 bp CAGTGGAACTCCTCAGCCAGGCGCTCTGAAACCAACCACAGTCCACTGAAGTTGTGCAGTCGGTGCAGCTaGAACTCCAGGGAGCTGTTG +
Preference number: 5 (lower is better)
Translates to: QWNSSARRSETNHSPLKLCSRCS*NSRELL
Trigger: CAACAGCTCCCTGGAGTTCAAGCTGCACCGACTGCA...CAACTTCAGTGGACTGTGGTTGGTTTCAGAGCGCCTGGCTGAGGAGTTCCACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313386.9
ENST00000515098.5
ENST00000542098.2
CDS-3UTR CAA 90 bp CTGAGGGCAGGGGTGGAAGGATGTCTACTGCTGAAGACCAAATCCCTTGCCACTTGCAGTCGGTGCAGCTaGAACTCCAGGGAGCTGTTG +
Preference number: 5 (lower is better)
Translates to: LRAGVEGCLLLKTKSLATCSRCS*NSRELL
Trigger: CAACAGCTCCCTGGAGTTCAAGCTGCACCGACTGCA...AGTGGCAAGGGATTTGGTCTTCAGCAGTAGACATCCTTCCACCCCTGCCCTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313386.9
ENST00000515098.5
ENST00000542098.2
CDS-3UTR CAA 90 bp TGCTCCCCTCAGTGGAACTCCTCAGCCAGGCGCTCTGAAACCAACCACAGTCCAAGTCAGGGATGCAAGTaGTGTTCTTCCTGCCTGGAC +
Preference number: 5 (lower is better)
Translates to: CSPQWNSSARRSETNHSPSQGCK*CSSCLD
Trigger: GTCCAGGCAGGAAGAACACAACTTGCATCCCTGACT...TGGACTGTGGTTGGTTTCAGAGCGCCTGGCTGAGGAGTTCCACTGAGGGGAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313386.9
ENST00000515098.5
CDS GCA 90 bp ACCCAAGGGCCTCCTTACTCCAACGCAGGACCCAGGTCTTGTTCGTaGAGGGCTTCCAGGATTCGATTCAACTCTAGGAAAGGCTGCTTG +
Preference number: 5 (lower is better)
Translates to: TQGPPYSNAGPRSCS*RASRIRFNSRKGCL
Trigger: CAAGCAGCCTTTCCTAGAGTTGAATCGAATCCTGGAAGCCCTGCACGAACAAGACCTGGGTCCTGCGTTGGAGTAAGGAGGCCCTTGGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507575.5
ENST00000513162.5
CDS-3UTR CAA 90 bp CCGAGGGGCAAGGGTGGACATAGCATTGGCATGGCAGCAAGAGACTTGGCTGAGTTCTGCACCGTATCTTaGATCTTCCGGCAGCACTGT +
Preference number: 5 (lower is better)
Translates to: PRGKGGHSIGMAARDLAEFCTVS*IFRQHC
Trigger: ACAGTGCTGCCGGAAGATCAAAGATACGGTGCAGAA...CTCAGCCAAGTCTCTTGCTGCCATGCCAATGCTATGTCCACCCTTGCCCCTCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313386.9
ENST00000515098.5
ENST00000542098.2
CDS-3UTR CAA 90 bp TCTGTGGGTGTTTTCTTAAGCAGCAGCTGCTGGTTGGGCCAGCGAGTTGGTGGGTTCCTGTCAATGGCTTaGCCCACTCGGGATACACTG +
Preference number: 5 (lower is better)
Translates to: SVGVFLSSSCWLGQRVGGFLSMA*PTRDTL
Trigger: CAGTGTATCCCGAGTGGGCAAAGCCATTGACAGGAA...CCCACCAACTCGCTGGCCCAACCAGCAGCTGCTGCTTAAGAAAACACCCACAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313386.9
ENST00000515098.5
CDS-3UTR CAA 90 bp CCAAATCCCTTGCCACTCTGTCGGTTGCTACTAAGTCAAACGCAAACAGAAACACACCGCTGGACACTCTaGGGCCGAGGGGCAAGGGTG +
Preference number: 5 (lower is better)
Translates to: PNPLPLCRLLLSQTQTETHRWTL*GRGARV
Trigger: CACCCTTGCCCCTCGGCCCAAGAGTGTCCAGCGGTG...TGTTTCTGTTTGCGTTTGACTTAGTAGCAACCGACAGAGTGGCAAGGGATTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313386.9
ENST00000515098.5
ENST00000542098.2
CDS-3UTR CAA 90 bp TGCTCCCCTCAGTGGAACTCCTCAGCCAGGCGCTCTGAAACCAACCACAGTCCATTCCCCCGAGCTCTCTaGCTTAACATAATGGCCCTA +
Preference number: 5 (lower is better)
Translates to: CSPQWNSSARRSETNHSPFPRAL*LNIMAL
Trigger: TAGGGCCATTATGTTAAGCAAGAGAGCTCGGGGGAA...TGGACTGTGGTTGGTTTCAGAGCGCCTGGCTGAGGAGTTCCACTGAGGGGAGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313386.9
ENST00000515098.5
CDS-3UTR CAA 90 bp CGCGCGTCCCACACCGCATCTGACACAACACCACAGATCTCAGAGTCGAAGTTCTTCTGCACCGTATCTTaGATCTTCCGGCAGCACTGC +
Preference number: 5 (lower is better)
Translates to: RASHTASDTTPQISESKFFCTVS*IFRQHC
Trigger: GCAGTGCTGCCGGAAGATCAAAGATACGGTGCAGAA...GAACTTCGACTCTGAGATCTGTGGTGTTGTGTCAGATGCGGTGTGGGACGCGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512811.5
CDS-3UTR CAA 90 bp ACTGCTGTGAATGTCCTTATGGTCCGAAGCCAGTTTCTGCACCGTATCTTTGATGCTGTCGCAGGGCACTaGCAAGGGTGGCCACCCACC +
Preference number: 5 (lower is better)
Translates to: TAVNVLMVRSQFLHRIFDAVAGH*QGWPPT
Trigger: GGTGGGTGGCCACCCTTGCAAGTGCCCTGCGACAGC...ATCAAAGATACGGTGCAGAAACTGGCTTCGGACCATAAGGACATTCACAGCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512663.5
CDS-3UTR CAA 90 bp GACTATTTACAGTGGGAGATGGTACATACTGTTGAGGCTGTAGTGGGAGGAAGAGGGACGGAGGACTGCTaGAGCCCGGGAGGTCAAGGC +
Preference number: 5 (lower is better)
Translates to: DYLQWEMVHTVEAVVGGRGTEDC*SPGGQG
Trigger: GCCTTGACCTCCCGGGCTCAAGCAGTCCTCCGTCCC...TCTTCCTCCCACTACAGCCTCAACAGTATGTACCATCTCCCACTGTAAATAGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000515098.5
ENST00000542098.2
CDS TCA 90 bp CAGACAGGCAAAAAGGGCCAGCGCGCCATGCTTCAGCATGGACCTTaGGACAGGGCTCTAAAATGGTGCACGGTCAAATCGGTCCTCAAA +
Preference number: 5 (lower is better)
Translates to: QTGKKGQRAMLQHGP*DRALKWCTVKSVLK
Trigger: TTTGAGGACCGATTTGACCGTGCACCATTTTAGAGCCCTGTCTCAAGGTCCATGCTGAAGCATGGCGCGCTGGCCCTTTTTGCCTGTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000507937.1
CDS GCA 90 bp CTCTATTCTAAATGCCAGCCCCGTAGCCCAGGAGGCAGCCCTGAATaGCAGGGTGAAAGAACTAGCTTCTCTTCCAGGTCCTGCCACTTT +
Preference number: 5 (lower is better)
Translates to: LYSKCQPRSPGGSPE*QGERTSFSSRSCHF
Trigger: AAAGTGGCAGGACCTGGAAGAGAAGCTAGTTCTTTCACCCTGGCATTCAGGGCTGCCTCCTGGGCTACGGGGCTGGCATTTAGAATAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000513162.5
ENST00000515360.5
CDS CCA 90 bp ATCACAGCAGACAGGCAAAAAGGGCCAGCGCGCCATGCTTCAGCATaGACCTTGAGACAGGGCTCTAAAATGGTGCACGGTCAAATCGGT +
Preference number: 5 (lower is better)
Translates to: ITADRQKGPARHASA*TLRQGSKMVHGQIG
Trigger: ACCGATTTGACCGTGCACCATTTTAGAGCCCTGTCTCAAGGTCCATGCTGAAGCATGGCGCGCTGGCCCTTTTTGCCTGTCTGCTGTGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000507937.1
CDS-3UTR CAA 90 bp CAGTGGAACTCCTCAGCCAGGCGCTCTGAAACCAACCACAGTCCACTGAAGTTGTTCCTGTCAATGGCTTaGCCCACTCGGGATACACTG +
Preference number: 5 (lower is better)
Translates to: QWNSSARRSETNHSPLKLFLSMA*PTRDTL
Trigger: CAGTGTATCCCGAGTGGGCAAAGCCATTGACAGGAA...CAACTTCAGTGGACTGTGGTTGGTTTCAGAGCGCCTGGCTGAGGAGTTCCACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313386.9
ENST00000515098.5
ENST00000542098.2
CDS-3UTR CAA 90 bp GGATGTCTACTGCTGAAGACCAAATCCCTTGCCACTCTGTCGGTTGCTACTAAGAACTCCAGGGAGCTGTaGAGTTCCAGCAGGCGCTGC +
Preference number: 5 (lower is better)
Translates to: GCLLLKTKSLATLSVATKNSREL*SSSRRC
Trigger: GCAGCGCCTGCTGGAACTCAACAGCTCCCTGGAGTT...CTTAGTAGCAACCGACAGAGTGGCAAGGGATTTGGTCTTCAGCAGTAGACATCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313386.9
ENST00000515098.5
ENST00000542098.2
CDS-3UTR CAA 90 bp TCTGAAACCAACCACAGTCCACTGAAGTTGACCACCCTACCGAGACAGACCAAGTGCAGTCGGTGCAGCTaGAACTCCAGGGAGCTGTTG +
Preference number: 5 (lower is better)
Translates to: SETNHSPLKLTTLPRQTKCSRCS*NSRELL
Trigger: CAACAGCTCCCTGGAGTTCAAGCTGCACCGACTGCA...CTTGGTCTGTCTCGGTAGGGTGGTCAACTTCAGTGGACTGTGGTTGGTTTCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313386.9
ENST00000515098.5
ENST00000542098.2
CDS-3UTR CAA 90 bp GTGGAAGGATGTCTACTGCTGAAGACCAAATCCCTTGCCACTCTGTCGGTTGCTTGGCCATGTTTTTGTTaGCGGCAGCCACCAGGCCGT +
Preference number: 5 (lower is better)
Translates to: VEGCLLLKTKSLATLSVAWPCFC*RQPPGR
Trigger: ACGGCCTGGTGGCTGCCGCAAACAAAAACATGGCCA...AGCAACCGACAGAGTGGCAAGGGATTTGGTCTTCAGCAGTAGACATCCTTCCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313386.9
ENST00000515098.5
CDS-3UTR CAA 90 bp AGACCCACTTCATGGAAGCCTAAAGCCCCCACATCAGGAACACCCCCATTCCTACTGGTGGGTCATCAGTaGGTGACTTCCTGGCATACA +
Preference number: 5 (lower is better)
Translates to: RPTSWKPKAPTSGTPPFLLVGHQ*VTSWHT
Trigger: TGTATGCCAGGAAGTCACCAACTGATGACCCACCAG...TAGGAATGGGGGTGTTCCTGATGTGGGGGCTTTAGGCTTCCATGAAGTGGGTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000313386.9
ENST00000515098.5
CDS-3UTR CAA 90 bp CAGTGGAACTCCTCAGCCAGGCGCTCTGAAACCAACCACAGTCCACTGAAGTTGAAAGCAGGAGATCACTaGAACCCAGGAGTTCAAGGC +
Preference number: 5 (lower is better)
Translates to: QWNSSARRSETNHSPLKLKAGDH*NPGVQG
Trigger: GCCTTGAACTCCTGGGTTCAAGTGATCTCCTGCTTT...CAACTTCAGTGGACTGTGGTTGGTTTCAGAGCGCCTGGCTGAGGAGTTCCACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313386.9
ENST00000515098.5
CDS TCA 90 bp ATTGAGGTGCTGTACTCAGACACCATCAACAGTCTAAATACACAGTaGCAGCTGTCCACTGTGGCGGAGTGTGTGGCTCTGGGGTCAGGT +
Preference number: 5 (lower is better)
Translates to: IEVLYSDTINSLNTQ*QLSTVAECVALGSG
Trigger: ACCTGACCCCAGAGCCACACACTCCGCCACAGTGGACAGCTGTCACTGTGTATTTAGACTGTTGATGGTGTCTGAGTACAGCACCTCAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507937.1
CDS CCA 90 bp CTAAGAAAGCCAGTTTCGGTCTCTGAAAGCACCGAGCACTGTTCCTaGCACATGGCAGGGCCTTGGCAAATGATGATTACCTCTCTACCC +
Preference number: 5 (lower is better)
Translates to: LRKPVSVSESTEHCS*HMAGPWQMMITSLP
Trigger: GGGTAGAGAGGTAATCATCATTTGCCAAGGCCCTGCCATGTGCCAGGAACAGTGCTCGGTGCTTTCAGAGACCGAAACTGGCTTTCTTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507937.1
CDS-3UTR CAA 90 bp CCTTTCATAGTTGCCATGTGGGAATGTAGGCCCTGTGTGGCTGGACCATGCCTTTTCTGCACCGTATCTTaGATCTTCCGGCAGCACTGT +
Preference number: 5 (lower is better)
Translates to: PFIVAMWECRPCVAGPCLFCTVS*IFRQHC
Trigger: ACAGTGCTGCCGGAAGATCAAAGATACGGTGCAGAA...AAGGCATGGTCCAGCCACACAGGGCCTACATTCCCACATGGCAACTATGAAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313386.9
ENST00000515098.5
CDS-3UTR CAA 90 bp CATTCCGTTCTAACTGGGACTATTTACAGTGGGAGATGGTACATACTGTTGAGGCGCAGGACCCAGGTCTaGTTCGTGCAGGGCTTCCAG +
Preference number: 5 (lower is better)
Translates to: HSVLTGTIYSGRWYILLRRRTQV*FVQGFQ
Trigger: CTGGAAGCCCTGCACGAACAAGACCTGGGTCCTGCG...CCTCAACAGTATGTACCATCTCCCACTGTAAATAGTCCCAGTTAGAACGGAATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313386.9
ENST00000515098.5
ENST00000542098.2
CDS-3UTR CAA 90 bp GCCCTGTTGTGCAAGTTACTTCATTTTCCTGAATCCCATTACACGGATTTCTCCCGCAGGACCCAGGTCTaGTTCGTGCAGGGCTTCCAG +
Preference number: 5 (lower is better)
Translates to: ALLCKLLHFPESHYTDFSRRTQV*FVQGFQ
Trigger: CTGGAAGCCCTGCACGAACAAGACCTGGGTCCTGCG...GGAGAAATCCGTGTAATGGGATTCAGGAAAATGAAGTAACTTGCACAACAGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313386.9
ENST00000515098.5
CDS-3UTR CAA 90 bp CTTGGGCCGAGGGGCAAGGGTGGACATAGCATTGGCATGGCAGCAAGAGACTTGCCATTAATGAGCTTATaGAGTGCATCTCGGGAGATA +
Preference number: 5 (lower is better)
Translates to: LGPRGKGGHSIGMAARDLPLMSL*SASREI
Trigger: TATCTCCCGAGATGCACTCAATAAGCTCATTAATGG...CAAGTCTCTTGCTGCCATGCCAATGCTATGTCCACCCTTGCCCCTCGGCCCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313386.9
ENST00000515098.5
ENST00000542098.2
CDS-3UTR CAA 90 bp CTCTTGGGCCGAGGGGCAAGGGTGGACATAGCATTGGCATGGCAGCAAGAGACTCCATTAATGAGCTTATaGAGTGCATCTCGGGAGATA +
Preference number: 5 (lower is better)
Translates to: LLGRGARVDIALAWQQETPLMSL*SASREI
Trigger: TATCTCCCGAGATGCACTCAATAAGCTCATTAATGG...AGTCTCTTGCTGCCATGCCAATGCTATGTCCACCCTTGCCCCTCGGCCCAAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313386.9
ENST00000515098.5
ENST00000542098.2
CDS CCA 90 bp CTTTATAATGGTGGCTATCAACTAGGCCGCCTAACAAATGGAGGTTaGGGTTCCCTTCTCGTGACAGTTGCATGGGGAAGGGAGCCTACT +
Preference number: 5 (lower is better)
Translates to: LYNGGYQLGRLTNGG*GSLLVTVAWGREPT
Trigger: AGTAGGCTCCCTTCCCCATGCAACTGTCACGAGAAGGGAACCCCAACCTCCATTTGTTAGGCGGCCTAGTTGATAGCCACCATTATAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507937.1
CDS-3UTR CAA 90 bp TTCTGCACCGTATCTTTGATCTTCCGGCAGCACTGTGACATCACCAGAGAGAGGTTCTGCACCGTATCTTaGATCTTCCGGCAGCACTGT +
Preference number: 5 (lower is better)
Translates to: FCTVSLIFRQHCDITRERFCTVS*IFRQHC
Trigger: ACAGTGCTGCCGGAAGATCAAAGATACGGTGCAGAA...CCTCTCTCTGGTGATGTCACAGTGCTGCCGGAAGATCAAAGATACGGTGCAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512663.5
CDS-3UTR CAA 90 bp TCTGAAACCAACCACAGTCCACTGAAGTTGACCACCCTACCGAGACAGACCAAGTTCTGCACCGTATCTTaGATCTTCCGGCAGCACTGT +
Preference number: 5 (lower is better)
Translates to: SETNHSPLKLTTLPRQTKFCTVS*IFRQHC
Trigger: ACAGTGCTGCCGGAAGATCAAAGATACGGTGCAGAA...CTTGGTCTGTCTCGGTAGGGTGGTCAACTTCAGTGGACTGTGGTTGGTTTCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313386.9
ENST00000515098.5
ENST00000542098.2
CDS-3UTR CAA 90 bp TCTAACTGGGACTATTTACAGTGGGAGATGGTACATACTGTTGAGGCTGTAGTGAACTCCAGGGAGCTGTaGAGTTCCAGCAGGCGCTGC +
Preference number: 5 (lower is better)
Translates to: SNWDYLQWEMVHTVEAVVNSREL*SSSRRC
Trigger: GCAGCGCCTGCTGGAACTCAACAGCTCCCTGGAGTT...CACTACAGCCTCAACAGTATGTACCATCTCCCACTGTAAATAGTCCCAGTTAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313386.9
ENST00000515098.5
ENST00000542098.2
CDS-3UTR CAA 90 bp ACCAAATCCCTTGCCACTCTGTCGGTTGCTACTAAGTCAAACGCAAACAGAAACTGGCCATGTTTTTGTTaGCGGCAGCCACCAGGCCGT +
Preference number: 5 (lower is better)
Translates to: TKSLATLSVATKSNANRNWPCFC*RQPPGR
Trigger: ACGGCCTGGTGGCTGCCGCAAACAAAAACATGGCCA...GTTTCTGTTTGCGTTTGACTTAGTAGCAACCGACAGAGTGGCAAGGGATTTGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313386.9
ENST00000515098.5
CDS-3UTR CAA 90 bp CAAAGTTATAAAACAACGGCATTCCGTTCTAACTGGGACTATTTACAGTGGGAGACGAGGACTGGACGTTaGAGTCCGAGCAACTCCCCC +
Preference number: 5 (lower is better)
Translates to: QSYKTTAFRSNWDYLQWETRTGR*SPSNSP
Trigger: GGGGGAGTTGCTCGGACTCAAACGTCCAGTCCTCGT...CTCCCACTGTAAATAGTCCCAGTTAGAACGGAATGCCGTTGTTTTATAACTTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313386.9
ENST00000515098.5
CDS-3UTR CAA 90 bp ACTGCTGTGAATGTCCTTATGGTCCGAAGCCAGTTTCTGCACCGTATCTTTGATTTCCTGTCAATGGCTTaGCCCACTCGGGATACACTG +
Preference number: 5 (lower is better)
Translates to: TAVNVLMVRSQFLHRIFDFLSMA*PTRDTL
Trigger: CAGTGTATCCCGAGTGGGCAAAGCCATTGACAGGAA...ATCAAAGATACGGTGCAGAAACTGGCTTCGGACCATAAGGACATTCACAGCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512663.5
CDS-3UTR CAA 90 bp GCCCTGTTGTGCAAGTTACTTCATTTTCCTGAATCCCATTACACGGATTTCTCCAGCTTGATGGGAGGGTaGGAATCTGACGTCTGCTGG +
Preference number: 5 (lower is better)
Translates to: ALLCKLLHFPESHYTDFSSLMGG*ESDVCW
Trigger: CCAGCAGACGTCAGATTCCAACCCTCCCATCAAGCT...GGAGAAATCCGTGTAATGGGATTCAGGAAAATGAAGTAACTTGCACAACAGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313386.9
ENST00000515098.5
CDS-3UTR CAA 90 bp ACCAAATCCCTTGCCACTCTGTCGGTTGCTACTAAGTCAAACGCAAACAGAAACAGTCAGGGATGCAAGTaGTGTTCTTCCTGCCTGGAC +
Preference number: 5 (lower is better)
Translates to: TKSLATLSVATKSNANRNSQGCK*CSSCLD
Trigger: GTCCAGGCAGGAAGAACACAACTTGCATCCCTGACT...GTTTCTGTTTGCGTTTGACTTAGTAGCAACCGACAGAGTGGCAAGGGATTTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313386.9
ENST00000515098.5
CDS GCA 90 bp ACAGTAGGGACACTTCAGCTTTCCTCCATTAATGAGCTTATTGAGTaGATCTCGGGAGATAACATGGCCACAGATGAGCTTGATGGGAGG +
Preference number: 5 (lower is better)
Translates to: TVGTLQLSSINELIE*ISGDNMATDELDGR
Trigger: CCTCCCATCAAGCTCATCTGTGGCCATGTTATCTCCCGAGATGCACTCAATAAGCTCATTAATGGAGGAAAGCTGAAGTGTCCCTACTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000313386.9
ENST00000507575.5
ENST00000507937.1
ENST00000513162.5
ENST00000515098.5
ENST00000515360.5
ENST00000542098.2
CDS GCA 90 bp CTTCTCTTCCAGGTCCTGCCACTTTTTAACTGTCTGACTTGGAACTaGTCAAATGGGAAAAGCCAGTTCACCTCTGGGAGCCTTCATTTC +
Preference number: 5 (lower is better)
Translates to: LLFQVLPLFNCLTWN*SNGKSQFTSGSLHF
Trigger: GAAATGAAGGCTCCCAGAGGTGAACTGGCTTTTCCCATTTGAGCAGTTCCAAGTCAGACAGTTAAAAAGTGGCAGGACCTGGAAGAGAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000513162.5
ENST00000515360.5
CDS CCA 90 bp TTTCCTCCATTAATGAGCTTATTGAGTGCATCTCGGGAGATAACATaGCCACAGATGAGCTTGATGGGAGGGTTGGAATCTGACGTCTGC +
Preference number: 5 (lower is better)
Translates to: FPPLMSLLSASREIT*PQMSLMGGLESDVC
Trigger: GCAGACGTCAGATTCCAACCCTCCCATCAAGCTCATCTGTGGCCATGTTATCTCCCGAGATGCACTCAATAAGCTCATTAATGGAGGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000313386.9
ENST00000507575.5
ENST00000507937.1
ENST00000513162.5
ENST00000515098.5
ENST00000515360.5
ENST00000542098.2
CDS-3UTR CAA 90 bp TCTAACTGGGACTATTTACAGTGGGAGATGGTACATACTGTTGAGGCTGTAGTGTGGCCACAGATGAGCTaGATGGGAGGGTTGGAATCT +
Preference number: 5 (lower is better)
Translates to: SNWDYLQWEMVHTVEAVVWPQMS*MGGLES
Trigger: AGATTCCAACCCTCCCATCAAGCTCATCTGTGGCCA...CACTACAGCCTCAACAGTATGTACCATCTCCCACTGTAAATAGTCCCAGTTAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313386.9
ENST00000515098.5
ENST00000542098.2
CDS-3UTR CAA 90 bp GCCCTGTTGTGCAAGTTACTTCATTTTCCTGAATCCCATTACACGGATTTCTCCTGGCCACAGATGAGCTaGATGGGAGGGTTGGAATCT +
Preference number: 5 (lower is better)
Translates to: ALLCKLLHFPESHYTDFSWPQMS*MGGLES
Trigger: AGATTCCAACCCTCCCATCAAGCTCATCTGTGGCCA...GGAGAAATCCGTGTAATGGGATTCAGGAAAATGAAGTAACTTGCACAACAGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313386.9
ENST00000515098.5
CDS-3UTR CAA 90 bp CATTCCGTTCTAACTGGGACTATTTACAGTGGGAGATGGTACATACTGTTGAGGAGGGTGGACATAGCATaGGCATGGCAGCAAGAGACT +
Preference number: 5 (lower is better)
Translates to: HSVLTGTIYSGRWYILLRRVDIA*AWQQET
Trigger: AGTCTCTTGCTGCCATGCCAATGCTATGTCCACCCT...CCTCAACAGTATGTACCATCTCCCACTGTAAATAGTCCCAGTTAGAACGGAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313386.9
ENST00000515098.5
ENST00000542098.2
CDS TCA 90 bp ACAGTGCACAGGGTAGTCCTGCGCAACAGAATCATCCTAAGGTGCTaGTGTTGTTCTTGCTGGGAAATGACGTTCTATAAACTGAGTCCA +
Preference number: 5 (lower is better)
Translates to: TVHRVVLRNRIILRC*CCSCWEMTFYKLSP
Trigger: TGGACTCAGTTTATAGAACGTCATTTCCCAGCAAGAACAACATCAGCACCTTAGGATGATTCTGTTGCGCAGGACTACCCTGTGCACTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507937.1
CDS-3UTR CAA 90 bp CATTCCGTTCTAACTGGGACTATTTACAGTGGGAGATGGTACATACTGTTGAGGTTCCCCCGAGCTCTCTaGCTTAACATAATGGCCCTA +
Preference number: 5 (lower is better)
Translates to: HSVLTGTIYSGRWYILLRFPRAL*LNIMAL
Trigger: TAGGGCCATTATGTTAAGCAAGAGAGCTCGGGGGAA...CCTCAACAGTATGTACCATCTCCCACTGTAAATAGTCCCAGTTAGAACGGAATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313386.9
ENST00000515098.5
CDS-3UTR CAA 90 bp CATTCCGTTCTAACTGGGACTATTTACAGTGGGAGATGGTACATACTGTTGAGGTTGCCACTCTGTCGGTaGCTACTAAGTCAAACGCAA +
Preference number: 5 (lower is better)
Translates to: HSVLTGTIYSGRWYILLRLPLCR*LLSQTQ
Trigger: TTGCGTTTGACTTAGTAGCAACCGACAGAGTGGCAA...CCTCAACAGTATGTACCATCTCCCACTGTAAATAGTCCCAGTTAGAACGGAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313386.9
ENST00000515098.5
ENST00000542098.2
CDS-3UTR CAA 90 bp GCCCTGTTGTGCAAGTTACTTCATTTTCCTGAATCCCATTACACGGATTTCTCCTTGCCACTCTGTCGGTaGCTACTAAGTCAAACGCAA +
Preference number: 5 (lower is better)
Translates to: ALLCKLLHFPESHYTDFSLPLCR*LLSQTQ
Trigger: TTGCGTTTGACTTAGTAGCAACCGACAGAGTGGCAA...GGAGAAATCCGTGTAATGGGATTCAGGAAAATGAAGTAACTTGCACAACAGGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313386.9
ENST00000515098.5
CDS-3UTR CAA 90 bp CAAAGTTATAAAACAACGGCATTCCGTTCTAACTGGGACTATTTACAGTGGGAGAGGGTGGACATAGCATaGGCATGGCAGCAAGAGACT +
Preference number: 5 (lower is better)
Translates to: QSYKTTAFRSNWDYLQWERVDIA*AWQQET
Trigger: AGTCTCTTGCTGCCATGCCAATGCTATGTCCACCCT...CTCCCACTGTAAATAGTCCCAGTTAGAACGGAATGCCGTTGTTTTATAACTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313386.9
ENST00000515098.5
ENST00000542098.2
CDS TCA 90 bp TATGAGGTAGGTACAATGATTAGACCCACTTTGCAGATGAGAAAATaGGACACAAAGATTAAATCAGTTGCCCAAGGTCAGGCGTCTGGG +
Preference number: 5 (lower is better)
Translates to: YEVGTMIRPTLQMRK*DTKIKSVAQGQASG
Trigger: CCCAGACGCCTGACCTTGGGCAACTGATTTAATCTTTGTGTCTCATTTTCTCATCTGCAAAGTGGGTCTAATCATTGTACCTACCTCATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508647.5
CDS-3UTR CAA 90 bp TTGTTCAAAGTTATAAAACAACGGCATTCCGTTCTAACTGGGACTATTTACAGTAACTTCTGCAGGACCTaGTCCAGCTCTCTCTCCACG +
Preference number: 5 (lower is better)
Translates to: LFKVIKQRHSVLTGTIYSNFCRT*SSSLST
Trigger: CGTGGAGAGAGAGCTGGACAAGGTCCTGCAGAAGTT...ACTGTAAATAGTCCCAGTTAGAACGGAATGCCGTTGTTTTATAACTTTGAACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313386.9
ENST00000515098.5
CDS TCA 90 bp GTCCATGGTAACAAATCAGATGAGCGTAGAATCAGTCCACTATATTaGGGTGCTGTACTCAGACACCATCAACAGTCTAAATACACAGTG +
Preference number: 5 (lower is better)
Translates to: VHGNKSDERRISPLY*GAVLRHHQQSKYTV
Trigger: CACTGTGTATTTAGACTGTTGATGGTGTCTGAGTACAGCACCTCAATATAGTGGACTGATTCTACGCTCATCTGATTTGTTACCATGGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507937.1
CDS TCA 90 bp CATAGGATTCTGTTTAACTGCCAGGTTAGACCTAGAGTTACCACCTaGTCCAGCAGTTCCACTCCGAAGGATATACCAGAAGAAATAAAA +
Preference number: 5 (lower is better)
Translates to: HRILFNCQVRPRVTT*SSSSTPKDIPEEIK
Trigger: TTTTATTTCTTCTGGTATATCCTTCGGAGTGGAACTGCTGGATCAGGTGGTAACTCTAGGTCTAACCTGGCAGTTAAACAGAATCCTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000513162.5
ENST00000515360.5
CDS CCA 90 bp AGAAGGTGGAAACAACCCAAATGTCCATCAGCTAGTGGAAAAACATaGCACATCCCTACAGTGGACTATTATTCAGCCATAGAAAGGAAT +
Preference number: 5 (lower is better)
Translates to: RRWKQPKCPSASGKT*HIPTVDYYSAIERN
Trigger: ATTCCTTTCTATGGCTGAATAATAGTCCACTGTAGGGATGTGCCATGTTTTTCCACTAGCTGATGGACATTTGGGTTGTTTCCACCTTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000513162.5
ENST00000515360.5
CDS GCA 90 bp ACTTACTATGGGTCAAGTGTTTATTTCAACTCATGGACTACAGCATaGATAGGATTCTGTTTAACTGCCAGGTTAGACCTAGAGTTACCA +
Preference number: 5 (lower is better)
Translates to: TYYGSSVYFNSWTTA*IGFCLTARLDLELP
Trigger: TGGTAACTCTAGGTCTAACCTGGCAGTTAAACAGAATCCTATGCATGCTGTAGTCCATGAGTTGAAATAAACACTTGACCCATAGTAAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000513162.5
ENST00000515360.5
CDS CCA 90 bp GAAATTACTGGTTGCTGTGAAATGAAGATGATCTGGCACTTACTATaGGTCAAGTGTTTATTTCAACTCATGGACTACAGCATGCATAGG +
Preference number: 5 (lower is better)
Translates to: EITGCCEMKMIWHLL*VKCLFQLMDYSMHR
Trigger: CCTATGCATGCTGTAGTCCATGAGTTGAAATAAACACTTGACCCATAGTAAGTGCCAGATCATCTTCATTTCACAGCAACCAGTAATTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000513162.5
ENST00000515360.5
CDS CCA 72 bp GTCCTCAGGGAGGCTGTCGCAGGGCACTTGCAAGGGTaGCCACCCACCTGCGCTGGCCAGCTCAGCCCGCAG +
Preference number: 6 (lower is better)
Translates to: VLREAVAGHLQG*PPTCAGQLSPQ
Trigger: CTGCGGGCTGAGCTGGCCAGCGCAGGTGGGTGGCCACCCTTGCAAGTGCCCTGCGACAGCCTCCCTGAGGAC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512663.5
CDS TCA 72 bp GCAGCCGAGCAAAGGGCTGGAAGTGCCGAGCATAGCTaGGGGCCTCCAGCTGCTTCGCGGGGCCTCCTGCCA +
Preference number: 6 (lower is better)
Translates to: AAEQRAGSAEHS*GPPAASRGLLP
Trigger: TGGCAGGAGGCCCCGCGAAGCAGCTGGAGGCCCTCAGCTATGCTCGGCACTTCCAGCCCTTTGCTCGGCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313386.9
ENST00000507575.5
ENST00000513162.5
ENST00000515098.5
ENST00000515360.5
ENST00000542098.2
CDS GCA 72 bp CAGGGTGCTCCCACCCCACGCCTGGAGCCGGCCACGTaGTCACCCTGTCAATGGCTTTGCCCACTCGGGATA +
Preference number: 6 (lower is better)
Translates to: QGAPTPRLEPAT*SPCQWLCPLGI
Trigger: TATCCCGAGTGGGCAAAGCCATTGACAGGGTGAGCACGTGGCCGGCTCCAGGCGTGGGGTGGGAGCACCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507575.5
ENST00000513162.5
CDS GCA 72 bp GGCTCTGGGTCCACCCCCAAGCGGGCAGCAGGACTGTaGAGCACAGCACAATATGCTGAGCCCGGTGGCTCC +
Preference number: 6 (lower is better)
Translates to: GSGSTPKRAAGL*STAQYAEPGGS
Trigger: GGAGCCACCGGGCTCAGCATATTGTGCTGTGCTGCACAGTCCTGCTGCCCGCTTGGGGGTGGACCCAGAGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000507937.1
CDS CAA 90 bp GCGGGGCCTCCTGCCAAGAGGCGGATGAAGTGCAGTCGGTGCAGCTaGAACTCCAGGGAGCTGTTGAGTTCCAGCAGGCGCTGCCTGTGG +
Preference number: 6 (lower is better)
Translates to: AGPPAKRRMKCSRCS*NSRELLSSSRRCLW
Trigger: CCACAGGCAGCGCCTGCTGGAACTCAACAGCTCCCTGGAGTTCAAGCTGCACCGACTGCACTTCATCCGCCTCTTGGCAGGAGGCCCCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313386.9
ENST00000507575.5
ENST00000513162.5
ENST00000515098.5
ENST00000515360.5
ENST00000542098.2
CDS GCA 72 bp ATAGCTGAGGGCCTCCAGCTGCTTCGCGGGGCCTCCTaGCAAGAGGCGGATGAAGTGCAGTCGGTGCAGCTT +
Preference number: 6 (lower is better)
Translates to: IAEGLQLLRGAS*QEADEVQSVQL
Trigger: AAGCTGCACCGACTGCACTTCATCCGCCTCTTGGCAGGAGGCCCCGCGAAGCAGCTGGAGGCCCTCAGCTAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313386.9
ENST00000507575.5
ENST00000513162.5
ENST00000515098.5
ENST00000515360.5
ENST00000542098.2
CDS GCA 72 bp GTGACTTCTCCAAGCCCAGCCGCAGGTACACCAGGCTaGCCATCATCACCTGGATCTCCCGCTGGTGCAGCC +
Preference number: 6 (lower is better)
Translates to: VTSPSPAAGTPG*PSSPGSPAGAA
Trigger: GGCTGCACCAGCGGGAGATCCAGGTGATGATGGGCAGCCTGGTGTACCTGCGGCTGGGCTTGGAGAAGTCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313386.9
ENST00000507575.5
ENST00000513162.5
ENST00000515098.5
ENST00000515360.5
ENST00000542098.2
CDS GCA 72 bp GTCTGGGACTCCAGCTCCCGGCCCAGGGCCGACAACTaGGAAGAGAACAAGCCCAAGGGCAGATTGTTCGGG +
Preference number: 6 (lower is better)
Translates to: VWDSSSRPRADN*EENKPKGRLFG
Trigger: CCCGAACAATCTGCCCTTGGGCTTGTTCTCTTCGCAGTTGTCGGCCCTGGGCCGGGAGCTGGAGTCCCAGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507457.5
CDS CAA 90 bp AGGCGGATGAAGTGCAGTCGGTGCAGCTTGAACTCCAGGGAGCTGTaGAGTTCCAGCAGGCGCTGCCTGTGGGAGACGGCCCATCTGGGA +
Preference number: 6 (lower is better)
Translates to: RRMKCSRCSLNSREL*SSSRRCLWETAHLG
Trigger: TCCCAGATGGGCCGTCTCCCACAGGCAGCGCCTGCTGGAACTCAACAGCTCCCTGGAGTTCAAGCTGCACCGACTGCACTTCATCCGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507575.5
ENST00000513162.5
CDS GCA 72 bp TTGAACTCCAGGGAGCTGTTGAGTTCCAGCAGGCGCTaGCTGTGGGAGACGGCCCATTCCAACGCAGGACCC +
Preference number: 6 (lower is better)
Translates to: LNSRELLSSSRR*LWETAHSNAGP
Trigger: GGGTCCTGCGTTGGAATGGGCCGTCTCCCACAGGCAGCGCCTGCTGGAACTCAACAGCTCCCTGGAGTTCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313386.9
ENST00000515098.5
ENST00000515360.5
ENST00000542098.2
CDS GCA 72 bp TGCTTCGCGGGGCCTCCTGCCAAGAGGCGGATGAAGTaGAGTCGGTGCAGCTTGAACTCCAGGGAGCTGTTG +
Preference number: 6 (lower is better)
Translates to: CFAGPPAKRRMK*SRCSLNSRELL
Trigger: CAACAGCTCCCTGGAGTTCAAGCTGCACCGACTGCACTTCATCCGCCTCTTGGCAGGAGGCCCCGCGAAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313386.9
ENST00000507575.5
ENST00000513162.5
ENST00000515098.5
ENST00000515360.5
ENST00000542098.2
CDS GCA 72 bp GGAACAGGCGTCCCGGGTAAAGGTCTCACAGATCTCTaGCCAGTGGCTGCTGTCCAGCAGGTGGCAGTAGGG +
Preference number: 6 (lower is better)
Translates to: GTGVPGKGLTDL*PVAAVQQVAVG
Trigger: CCCTACTGCCACCTGCTGGACAGCAGCCACTGGGCAGAGATCTGTGAGACCTTTACCCGGGACGCCTGTTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000313386.9
ENST00000507575.5
ENST00000507937.1
ENST00000513162.5
ENST00000515098.5
ENST00000515360.5
ENST00000542098.2
CDS GCA 72 bp TGCAGTGAGCCAAGACCACGCCATTGCACTCCATCCTaGTCACTTCCGACCCAGCGCGGTCGCACGAGGACT +
Preference number: 6 (lower is better)
Translates to: CSEPRPRHCTPS*SLPTQRGRTRT
Trigger: AGTCCTCGTGCGACCGCGCTGGGTCGGAAGTGAGCAGGATGGAGTGCAATGGCGTGGTCTTGGCTCACTGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502814.5
CDS CCA 72 bp CCCAGCCGCAGGTACACCAGGCTGCCCATCATCACCTaGATCTCTACAAGGCAACCAGAGGGGGCAGCTCAG +
Preference number: 6 (lower is better)
Translates to: PSRRYTRLPIIT*ISTRQPEGAAQ
Trigger: CTGAGCTGCCCCCTCTGGTTGCCTTGTAGAGATCCAGGTGATGATGGGCAGCCTGGTGTACCTGCGGCTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000507937.1
CDS CAA 90 bp AGGCGGATGAAGTGCAGTCGGTGCAGCTTGAACTCCAGGGAGCTGTaGAGTTCCAGCAGGCGCTGCCTGTGGGAGACGGCCCATTCCAAC +
Preference number: 6 (lower is better)
Translates to: RRMKCSRCSLNSREL*SSSRRCLWETAHSN
Trigger: GTTGGAATGGGCCGTCTCCCACAGGCAGCGCCTGCTGGAACTCAACAGCTCCCTGGAGTTCAAGCTGCACCGACTGCACTTCATCCGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313386.9
ENST00000515098.5
ENST00000515360.5
ENST00000542098.2
CDS TCA 72 bp GCAGAGGGGCGTGGGTTAGCTGGGAAGGTCTTGCAATaGTCCAGGGTGAGGTGCAAGAGAGGCAGGGACCTC +
Preference number: 6 (lower is better)
Translates to: AEGRGLAGKVLQ*SRVRCKRGRDL
Trigger: GAGGTCCCTGCCTCTCTTGCACCTCACCCTGGATCATTGCAAGACCTTCCCAGCTAACCCACGCCCCTCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507937.1
CDS GCA 72 bp GGGCCTCCTGCCAAGAGGCGGATGAAGTGCAGTCGGTaGAGCTTGAACTCCAGGGAGCTGTTGAGTTCCAGC +
Preference number: 6 (lower is better)
Translates to: GPPAKRRMKCSR*SLNSRELLSSS
Trigger: GCTGGAACTCAACAGCTCCCTGGAGTTCAAGCTGCACCGACTGCACTTCATCCGCCTCTTGGCAGGAGGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313386.9
ENST00000507575.5
ENST00000513162.5
ENST00000515098.5
ENST00000515360.5
ENST00000542098.2
CDS GCA 72 bp TTGAACTCCAGGGAGCTGTTGAGTTCCAGCAGGCGCTaGCTGTGGGAGACGGCCCATCTGGGAAGAAAGGGG +
Preference number: 6 (lower is better)
Translates to: LNSRELLSSSRR*LWETAHLGRKG
Trigger: CCCCTTTCTTCCCAGATGGGCCGTCTCCCACAGGCAGCGCCTGCTGGAACTCAACAGCTCCCTGGAGTTCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507575.5
ENST00000513162.5
CDS CAA 72 bp CCTGCCAAGAGGCGGATGAAGTGCAGTCGGTGCAGCTaGAACTCCAGGGAGCTGTTGAGTTCCAGCAGGCGC +
Preference number: 6 (lower is better)
Translates to: PAKRRMKCSRCS*NSRELLSSSRR
Trigger: GCGCCTGCTGGAACTCAACAGCTCCCTGGAGTTCAAGCTGCACCGACTGCACTTCATCCGCCTCTTGGCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313386.9
ENST00000507575.5
ENST00000513162.5
ENST00000515098.5
ENST00000515360.5
ENST00000542098.2
CDS GCA 72 bp CAGATGAGCTTGATGGGAGGGTTGGAATCTGACGTCTaGTGGCGGAGGATGGGGCAAGCGAACACGGAGTGG +
Preference number: 6 (lower is better)
Translates to: QMSLMGGLESDV*WRRMGQANTEW
Trigger: CCACTCCGTGTTCGCTTGCCCCATCCTCCGCCAGCAGACGTCAGATTCCAACCCTCCCATCAAGCTCATCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000313386.9
ENST00000507575.5
ENST00000507937.1
ENST00000513162.5
ENST00000515098.5
ENST00000515360.5
ENST00000542098.2
CDS CAA 90 bp GTTCTGACGAAGGAGGAGAGACAGGGCCTGGTGATGCGGGCACTCTaGCTGGCTCTCCTTCGAGTCCTTGTACATCCCAGCTTCAGGGTG +
Preference number: 6 (lower is better)
Translates to: VLTKEERQGLVMRAL*LALLRVLVHPSFRV
Trigger: CACCCTGAAGCTGGGATGTACAAGGACTCGAAGGAGAGCCAGCAAGAGTGCCCGCATCACCAGGCCCTGTCTCTCCTCCTTCGTCAGAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507575.5
ENST00000513162.5
CDS TCA 72 bp ATGGCCACAGATGAGCTTGATGGGAGGGTTGGAATCTaGCGTCTGCTGGCGGAGGATGGGGCAAGCGAACAC +
Preference number: 6 (lower is better)
Translates to: MATDELDGRVGI*RLLAEDGASEH
Trigger: GTGTTCGCTTGCCCCATCCTCCGCCAGCAGACGTCAGATTCCAACCCTCCCATCAAGCTCATCTGTGGCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000313386.9
ENST00000507575.5
ENST00000507937.1
ENST00000513162.5
ENST00000515098.5
ENST00000515360.5
ENST00000542098.2
CDS TCA 72 bp CTGCTGCTGCTGTTCCCGCGCGTCCCACACCGCATCTaGCACAACACCACAGATCTCAGAGTCGAAGTTCTG +
Preference number: 6 (lower is better)
Translates to: LLLLFPRVPHRI*HNTTDLRVEVL
Trigger: CAGAACTTCGACTCTGAGATCTGTGGTGTTGTGTCAGATGCGGTGTGGGACGCGCGGGAACAGCAGCAGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507575.5
ENST00000513162.5
CDS TCA 72 bp AAGGTCAGGCGTCTGGGAAGTGGAGGAGCTGGGAACTaGACTGAAGCCAGACAGTCTGGCTCTGGCCTCAGA +
Preference number: 6 (lower is better)
Translates to: KVRRLGSGGAGN*TEARQSGSGLR
Trigger: TCTGAGGCCAGAGCCAGACTGTCTGGCTTCAGTTCAGTTCCCAGCTCCTCCACTTCCCAGACGCCTGACCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508647.5
CDS TCA 72 bp CCTTATGGTCCGAAGCCAGTTTCTGCACCGTATCTTTaGTCTTCCGGCAGCACTGCGCTGGCCAGCTCAGCC +
Preference number: 6 (lower is better)
Translates to: PYGPKPVSAPYL*SSGSTALASSA
Trigger: GGCTGAGCTGGCCAGCGCAGTGCTGCCGGAAGATCAAAGATACGGTGCAGAAACTGGCTTCGGACCATAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512811.5
CDS GCA 72 bp AAATGCCAGCCCCGTAGCCCAGGAGGCAGCCCTGAATaGCAGGGTGAAAGAACTAGCTTCTCTTCCAGGTCC +
Preference number: 6 (lower is better)
Translates to: KCQPRSPGGSPE*QGERTSFSSRS
Trigger: GGACCTGGAAGAGAAGCTAGTTCTTTCACCCTGGCATTCAGGGCTGCCTCCTGGGCTACGGGGCTGGCATTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000513162.5
ENST00000515360.5
CDS GCA 72 bp GTCCCCTGGAGGGCCGGTTTCAAGGAGGCCTACAGATaGAGGTACCAACATCCTCATCATCGTCCTTCCGGA +
Preference number: 6 (lower is better)
Translates to: VPWRAGFKEAYR*RYQHPHHRPSG
Trigger: TCCGGAAGGACGATGATGAGGATGTTGGTACCTGCATCTGTAGGCCTCCTTGAAACCGGCCCTCCAGGGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512663.5
CDS CCA 72 bp ATGAGCTTGATGGGAGGGTTGGAATCTGACGTCTGCTaGCGGAGGATGGGGCAAGCGAACACGGAGTGGTAC +
Preference number: 6 (lower is better)
Translates to: MSLMGGLESDVC*RRMGQANTEWY
Trigger: GTACCACTCCGTGTTCGCTTGCCCCATCCTCCGCCAGCAGACGTCAGATTCCAACCCTCCCATCAAGCTCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000313386.9
ENST00000507575.5
ENST00000507937.1
ENST00000513162.5
ENST00000515098.5
ENST00000515360.5
ENST00000542098.2
CDS CCA 72 bp AGTGACAGCTGTCCACTGTGGCGGAGTGTGTGGCTCTaGGGTCAGGTTCAAGTGCCCATTATTCCCTGCGAG +
Preference number: 6 (lower is better)
Translates to: SDSCPLWRSVWL*GQVQVPIIPCE
Trigger: CTCGCAGGGAATAATGGGCACTTGAACCTGACCCCAGAGCCACACACTCCGCCACAGTGGACAGCTGTCACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507937.1
CDS CCA 72 bp CCTTCTCGTGACAGTTGCATGGGGAAGGGAGCCTACTaGCTGGAACCTCAGGTGCTGAATACCCCACAGTGC +
Preference number: 6 (lower is better)
Translates to: PSRDSCMGKGAY*LEPQVLNTPQC
Trigger: GCACTGTGGGGTATTCAGCACCTGAGGTTCCAGCCAGTAGGCTCCCTTCCCCATGCAACTGTCACGAGAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507937.1
CDS CAA 72 bp GTGGGAGACGGCCCATTCCAACGCAGGACCCAGGTCTaGTTCGTGCAGGGCTTCCAGGATTCGATTCAACTC +
Preference number: 6 (lower is better)
Translates to: VGDGPFQRRTQV*FVQGFQDSIQL
Trigger: GAGTTGAATCGAATCCTGGAAGCCCTGCACGAACAAGACCTGGGTCCTGCGTTGGAATGGGCCGTCTCCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313386.9
ENST00000515098.5
ENST00000515360.5
ENST00000542098.2
CDS CAA 90 bp TGGCTCTGGGGTCAGGTTCAAGTGCCCATTATTCCCTGCGAGGCCTaGGGCAAGTGCGTGCACATCTTGGGCCTCCATTTCCTCATCTGT +
Preference number: 6 (lower is better)
Translates to: WLWGQVQVPIIPCEA*GKCVHILGLHFLIC
Trigger: ACAGATGAGGAAATGGAGGCCCAAGATGTGCACGCACTTGCCCAAGGCCTCGCAGGGAATAATGGGCACTTGAACCTGACCCCAGAGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507937.1
CDS CCA 72 bp GACAGGCAAAAAGGGCCAGCGCGCCATGCTTCAGCATaGACCTTGAGACAGGGCTCTAAAATGGTGCACGGT +
Preference number: 6 (lower is better)
Translates to: DRQKGPARHASA*TLRQGSKMVHG
Trigger: ACCGTGCACCATTTTAGAGCCCTGTCTCAAGGTCCATGCTGAAGCATGGCGCGCTGGCCCTTTTTGCCTGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000507937.1
CDS CCA 72 bp CCAGCTCTCTCTCCACGCACGCACACTGCTCCATGGTaGCCTCAGCCTAATGCTCACGAAAACACTATGAGG +
Preference number: 6 (lower is better)
Translates to: PALSPRTHTAPW*PQPNAHENTMR
Trigger: CCTCATAGTGTTTTCGTGAGCATTAGGCTGAGGCCACCATGGAGCAGTGTGCGTGCGTGGAGAGAGAGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508647.5
CDS CAA 72 bp CCAAGGGCCTCCTTACTCCAACGCAGGACCCAGGTCTaGTTCGTGCAGGGCTTCCAGGATTCGATTCAACTC +
Preference number: 6 (lower is better)
Translates to: PRASLLQRRTQV*FVQGFQDSIQL
Trigger: GAGTTGAATCGAATCCTGGAAGCCCTGCACGAACAAGACCTGGGTCCTGCGTTGGAGTAAGGAGGCCCTTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507575.5
ENST00000513162.5
CDS CAA 72 bp TCCTTATGGTCCGAAGCCAGTTTCTGCACCGTATCTTaGATCTTCCGGCAGCACTGCGCTGGCCAGCTCAGC +
Preference number: 6 (lower is better)
Translates to: SLWSEASFCTVS*IFRQHCAGQLS
Trigger: GCTGAGCTGGCCAGCGCAGTGCTGCCGGAAGATCAAAGATACGGTGCAGAAACTGGCTTCGGACCATAAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512811.5
CDS CAA 90 bp GCAGACAGGCAAAAAGGGCCAGCGCGCCATGCTTCAGCATGGACCTaGAGACAGGGCTCTAAAATGGTGCACGGTCAAATCGGTCCTCAA +
Preference number: 6 (lower is better)
Translates to: ADRQKGPARHASAWT*RQGSKMVHGQIGPQ
Trigger: TTGAGGACCGATTTGACCGTGCACCATTTTAGAGCCCTGTCTCAAGGTCCATGCTGAAGCATGGCGCGCTGGCCCTTTTTGCCTGTCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000507937.1
CDS GCA 72 bp CAAATGATGATTACCTCTCTACCCTCCCACCTGTGCTaGCCTCACAGGGCTGGGTTGTACCTGACGCTAAGG +
Preference number: 6 (lower is better)
Translates to: QMMITSLPSHLC*PHRAGLYLTLR
Trigger: CCTTAGCGTCAGGTACAACCCAGCCCTGTGAGGGCAGCACAGGTGGGAGGGTAGAGAGGTAATCATCATTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507937.1
CDS GCA 72 bp TGGCAAATGATGATTACCTCTCTACCCTCCCACCTGTaGTGCCCTCACAGGGCTGGGTTGTACCTGACGCTA +
Preference number: 6 (lower is better)
Translates to: WQMMITSLPSHL*CPHRAGLYLTL
Trigger: TAGCGTCAGGTACAACCCAGCCCTGTGAGGGCAGCACAGGTGGGAGGGTAGAGAGGTAATCATCATTTGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507937.1
CDS GCA 72 bp CAAGTGCCCATTATTCCCTGCGAGGCCTTGGGCAAGTaGGTGCACATCTTGGGCCTCCATTTCCTCATCTGT +
Preference number: 6 (lower is better)
Translates to: QVPIIPCEALGK*VHILGLHFLIC
Trigger: ACAGATGAGGAAATGGAGGCCCAAGATGTGCACGCACTTGCCCAAGGCCTCGCAGGGAATAATGGGCACTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507937.1
CDS CCA 72 bp GGTGGCTATCAACTAGGCCGCCTAACAAATGGAGGTTaGGGTTCCCTTCTCGTGACAGTTGCATGGGGAAGG +
Preference number: 6 (lower is better)
Translates to: GGYQLGRLTNGG*GSLLVTVAWGR
Trigger: CCTTCCCCATGCAACTGTCACGAGAAGGGAACCCCAACCTCCATTTGTTAGGCGGCCTAGTTGATAGCCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507937.1
CDS CCA 72 bp AGAGGCAAAGCTGCAGACAAGGAACAGGGGCTAGAGTaGCTCAGATCACAGCAGACAGGCAAAAAGGGCCAG +
Preference number: 6 (lower is better)
Translates to: RGKAADKEQGLE*LRSQQTGKKGQ
Trigger: CTGGCCCTTTTTGCCTGTCTGCTGTGATCTGAGCCACTCTAGCCCCTGTTCCTTGTCTGCAGCTTTGCCTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000507937.1
CDS CCA 72 bp TGTCCAGCTCTCTCTCCACGCACGCACACTGCTCCATaGTGGCCTCAGCCTAATGCTCACGAAAACACTATG +
Preference number: 6 (lower is better)
Translates to: CPALSPRTHTAP*WPQPNAHENTM
Trigger: CATAGTGTTTTCGTGAGCATTAGGCTGAGGCCACCATGGAGCAGTGTGCGTGCGTGGAGAGAGAGCTGGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508647.5
CDS CAA 72 bp AGTGCATCTCGGGAGATAACATGGCCACAGATGAGCTaGATGGGAGGGTTGGAATCTGACGTCTGCTGGCGG +
Preference number: 6 (lower is better)
Translates to: SASREITWPQMS*MGGLESDVCWR
Trigger: CCGCCAGCAGACGTCAGATTCCAACCCTCCCATCAAGCTCATCTGTGGCCATGTTATCTCCCGAGATGCACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000313386.9
ENST00000507575.5
ENST00000507937.1
ENST00000513162.5
ENST00000515098.5
ENST00000515360.5
ENST00000542098.2
CDS CAA 90 bp AGCTTATTGAGTGCATCTCGGGAGATAACATGGCCACAGATGAGCTaGATGGGAGGGTTGGAATCTGACGTCTGCTGGCGGAGGATGGGG +
Preference number: 6 (lower is better)
Translates to: SLLSASREITWPQMS*MGGLESDVCWRRMG
Trigger: CCCCATCCTCCGCCAGCAGACGTCAGATTCCAACCCTCCCATCAAGCTCATCTGTGGCCATGTTATCTCCCGAGATGCACTCAATAAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000313386.9
ENST00000507575.5
ENST00000507937.1
ENST00000513162.5
ENST00000515098.5
ENST00000515360.5
ENST00000542098.2
CDS GCA 72 bp ACGGCCCATTCCAACGCAGGACCCAGGTCTTGTTCGTaGAGGGCTTCCAGGATTCGATTCAACTCTAGGAAA +
Preference number: 6 (lower is better)
Translates to: TAHSNAGPRSCS*RASRIRFNSRK
Trigger: TTTCCTAGAGTTGAATCGAATCCTGGAAGCCCTGCACGAACAAGACCTGGGTCCTGCGTTGGAATGGGCCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313386.9
ENST00000515098.5
ENST00000515360.5
ENST00000542098.2
CDS GCA 72 bp TGCCCATTATTCCCTGCGAGGCCTTGGGCAAGTGCGTaGACATCTTGGGCCTCCATTTCCTCATCTGTAGAA +
Preference number: 6 (lower is better)
Translates to: CPLFPARPWASA*TSWASISSSVE
Trigger: TTCTACAGATGAGGAAATGGAGGCCCAAGATGTGCACGCACTTGCCCAAGGCCTCGCAGGGAATAATGGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507937.1
CDS CAA 72 bp TGGTGGCTATCAACTAGGCCGCCTAACAAATGGAGGTaGGGGTTCCCTTCTCGTGACAGTTGCATGGGGAAG +
Preference number: 6 (lower is better)
Translates to: WWLSTRPPNKWR*GFPSRDSCMGK
Trigger: CTTCCCCATGCAACTGTCACGAGAAGGGAACCCCAACCTCCATTTGTTAGGCGGCCTAGTTGATAGCCACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507937.1
CDS GCA 72 bp CCTCCTTACTCCAACGCAGGACCCAGGTCTTGTTCGTaGAGGGCTTCCAGGATTCGATTCAACTCTAGGAAA +
Preference number: 6 (lower is better)
Translates to: PPYSNAGPRSCS*RASRIRFNSRK
Trigger: TTTCCTAGAGTTGAATCGAATCCTGGAAGCCCTGCACGAACAAGACCTGGGTCCTGCGTTGGAGTAAGGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507575.5
ENST00000513162.5
CDS TCA 72 bp CTGTACTCAGACACCATCAACAGTCTAAATACACAGTaGCAGCTGTCCACTGTGGCGGAGTGTGTGGCTCTG +
Preference number: 6 (lower is better)
Translates to: LYSDTINSLNTQ*QLSTVAECVAL
Trigger: CAGAGCCACACACTCCGCCACAGTGGACAGCTGTCACTGTGTATTTAGACTGTTGATGGTGTCTGAGTACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507937.1
CDS GCA 72 bp CAGGTCCTGCCACTTTTTAACTGTCTGACTTGGAACTaGTCAAATGGGAAAAGCCAGTTCACCTCTGGGAGC +
Preference number: 6 (lower is better)
Translates to: QVLPLFNCLTWN*SNGKSQFTSGS
Trigger: GCTCCCAGAGGTGAACTGGCTTTTCCCATTTGAGCAGTTCCAAGTCAGACAGTTAAAAAGTGGCAGGACCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000513162.5
ENST00000515360.5
CDS TCA 72 bp TATCTGCTCATCCTAATGACTGAAAAGTCCTTGGTGTaGCTAGGGAACAGTGAGCAGTTCCAAAGGGCCCCA +
Preference number: 6 (lower is better)
Translates to: YLLILMTEKSLV*LGNSEQFQRAP
Trigger: TGGGGCCCTTTGGAACTGCTCACTGTTCCCTAGTCACACCAAGGACTTTTCAGTCATTAGGATGAGCAGATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507937.1
CDS TCA 72 bp TTTCAACAAAATTCCTTCCAGGTAGGAATCAGAATATaGTGCGTTTCCCATCTGCCGGGTTCTGCTCCATGG +
Preference number: 6 (lower is better)
Translates to: FQQNSFQVGIRI*CVSHLPGSAPW
Trigger: CCATGGAGCAGAACCCGGCAGATGGGAAACGCATCATATTCTGATTCCTACCTGGAAGGAATTTTGTTGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000313386.9
ENST00000507575.5
ENST00000507937.1
ENST00000513162.5
ENST00000515098.5
ENST00000515360.5
ENST00000542098.2
CDS CCA 72 bp TTAATGAGCTTATTGAGTGCATCTCGGGAGATAACATaGCCACAGATGAGCTTGATGGGAGGGTTGGAATCT +
Preference number: 6 (lower is better)
Translates to: LMSLLSASREIT*PQMSLMGGLES
Trigger: AGATTCCAACCCTCCCATCAAGCTCATCTGTGGCCATGTTATCTCCCGAGATGCACTCAATAAGCTCATTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000313386.9
ENST00000507575.5
ENST00000507937.1
ENST00000513162.5
ENST00000515098.5
ENST00000515360.5
ENST00000542098.2
CDS TCA 72 bp AGGGTAGTCCTGCGCAACAGAATCATCCTAAGGTGCTaGTGTTGTTCTTGCTGGGAAATGACGTTCTATAAA +
Preference number: 6 (lower is better)
Translates to: RVVLRNRIILRC*CCSCWEMTFYK
Trigger: TTTATAGAACGTCATTTCCCAGCAAGAACAACATCAGCACCTTAGGATGATTCTGTTGCGCAGGACTACCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507937.1
CDS GCA 72 bp GGGTCAAGTGTTTATTTCAACTCATGGACTACAGCATaGATAGGATTCTGTTTAACTGCCAGGTTAGACCTA +
Preference number: 6 (lower is better)
Translates to: GSSVYFNSWTTA*IGFCLTARLDL
Trigger: TAGGTCTAACCTGGCAGTTAAACAGAATCCTATGCATGCTGTAGTCCATGAGTTGAAATAAACACTTGACCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000513162.5
ENST00000515360.5
CDS CCA 72 bp AAACAACCCAAATGTCCATCAGCTAGTGGAAAAACATaGCACATCCCTACAGTGGACTATTATTCAGCCATA +
Preference number: 6 (lower is better)
Translates to: KQPKCPSASGKT*HIPTVDYYSAI
Trigger: TATGGCTGAATAATAGTCCACTGTAGGGATGTGCCATGTTTTTCCACTAGCTGATGGACATTTGGGTTGTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000513162.5
ENST00000515360.5
CDS TCA 72 bp AACAAATCAGATGAGCGTAGAATCAGTCCACTATATTaGGGTGCTGTACTCAGACACCATCAACAGTCTAAA +
Preference number: 6 (lower is better)
Translates to: NKSDERRISPLY*GAVLRHHQQSK
Trigger: TTTAGACTGTTGATGGTGTCTGAGTACAGCACCTCAATATAGTGGACTGATTCTACGCTCATCTGATTTGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507937.1
CDS CAA 72 bp GTGCACGGTCAAATCGGTCCTCAAAGATCCCTCACATaGTTCATAAGATGTCACATATGTACTTATGTATGT +
Preference number: 6 (lower is better)
Translates to: VHGQIGPQRSLT*FIRCHICTYVC
Trigger: ACATACATAAGTACATATGTGACATCTTATGAACAATGTGAGGGATCTTTGAGGACCGATTTGACCGTGCAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507937.1
CDS CAA 90 bp TCTAAAATGGTGCACGGTCAAATCGGTCCTCAAAGATCCCTCACATaGTTCATAAGATGTCACATATGTACTTATGTATGTCTGACTCTA +
Preference number: 6 (lower is better)
Translates to: SKMVHGQIGPQRSLT*FIRCHICTYVCLTL
Trigger: TAGAGTCAGACATACATAAGTACATATGTGACATCTTATGAACAATGTGAGGGATCTTTGAGGACCGATTTGACCGTGCACCATTTTAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507937.1
CDS TCA 72 bp ACACAAAAGGCTACATGTGGTATGATTCCTTGTATATaGACTGTCCAAAATAGGCAAATCTATAGAGACAAA +
Preference number: 6 (lower is better)
Translates to: TQKATCGMIPCI*TVQNRQIYRDK
Trigger: TTTGTCTCTATAGATTTGCCTATTTTGGACAGTTCATATACAAGGAATCATACCACATGTAGCCTTTTGTGT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000513162.5
ENST00000515360.5