RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RMDN1 (Homo sapiens)

Ensembl gene IDs: ENSG00000176623

Ensembl transcript IDs: ENST00000406452.8, ENST00000430676.6, ENST00000517404.1, ENST00000517710.5, ENST00000517821.1, ENST00000518772.1, ENST00000519247.5, ENST00000519639.5, ENST00000519789.5, ENST00000519966.5, ENST00000521045.1, ENST00000522804.5, ENST00000522942.1, ENST00000523370.5, ENST00000523911.5, ENST00000524172.5

Found 244 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TCATACACCAATAGCTTTTTCTCCTCTTCTGAGGTTCTGCTAAGCTaGGCTACATCACGTGATGCCCGTGCCAAACGCCACAGTAACTCT +
Preference number: 1 (lower is better)
Translates to: SYTNSFFSSSEVLLS*ATSRDARAKRHSNS
Trigger: AGAGTTACTGTGGCGTTTGGCACGGGCATCACGTGATGTAGCTCAGCTTAGCAGAACCTCAGAAGAGGAGAAAAAGCTATTGGTGTATGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000522804.5
ENST00000524172.5
3UTR TCA 90 bp CAGTCAGGAATGATGGTGACATCAACCAACCACAAATTACCCACATaGGTGGCTGAGATAATGACACCTTTGCTTTCTGATGGTTCAAGG +
Preference number: 1 (lower is better)
Translates to: QSGMMVTSTNHKLPT*VAEIMTPLLSDGSR
Trigger: CCTTGAACCATCAGAAAGCAAAGGTGTCATTATCTCAGCCACTCATGTGGGTAATTTGTGGTTGGTTGATGTCACCATCATTCCTGACTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406452.8
3UTR GCA 90 bp CAACTGATAAAGTTTTTCTGTTTCTCCGCTTTCATACAGGTAGTCTaGTTGTTCAAGTATTTCTTCAACTGGGCATCATGGCACATGCCT +
Preference number: 1 (lower is better)
Translates to: QLIKFFCFSAFIQVV*LFKYFFNWASWHMP
Trigger: AGGCATGTGCCATGATGCCCAGTTGAAGAAATACTTGAACAAGCAGACTACCTGTATGAAAGCGGAGAAACAGAAAAACTTTATCAGTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000522804.5
ENST00000523370.5
3UTR GCA 90 bp CAACTGATAAAGTTTTTCTGTTTCTCCGCTTTCATACAGGTAGTCTaGTTGTTCAAGTATTTCTTCAACTTCATTTCAGGAGGCAATGGC +
Preference number: 1 (lower is better)
Translates to: QLIKFFCFSAFIQVV*LFKYFFNFISGGNG
Trigger: GCCATTGCCTCCTGAAATGAAGTTGAAGAAATACTTGAACAAGCAGACTACCTGTATGAAAGCGGAGAAACAGAAAAACTTTATCAGTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524172.5
3UTR GCA 90 bp GTGTTTAAACTTGGGTCCCATCTCCAAGATATCTTATTGTGTGTATaGAGGTATTCCAAAATTTGGAAAAACATCCCAAATCCAAGATGC +
Preference number: 1 (lower is better)
Translates to: VFKLGSHLQDILLCV*RYSKIWKNIPNPRC
Trigger: GCATCTTGGATTTGGGATGTTTTTCCAAATTTTGGAATACCTGCATACACACAATAAGATATCTTGGAGATGGGACCCAAGTTTAAACAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000406452.8
3UTR CCA 90 bp CATTGCTGGTATCCAGGATGCAAAATAATCTCTTTGCCTGAGCCATaGAGATTTATTTCTACCACTCTTATGGCGATTATTTATTTTACC +
Preference number: 1 (lower is better)
Translates to: HCWYPGCKIISLPEP*RFISTTLMAIIYFT
Trigger: GGTAAAATAAATAATCGCCATAAGAGTGGTAGAAATAAATCTCCATGGCTCAGGCAAAGAGATTATTTTGCATCCTGGATACCAGCAATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406452.8
ENST00000519966.5
3UTR GCA 90 bp CAGTTCAATTGCTTTCTCAAAATGCTCCTTGATGATATATGCATTTaGAATTTTAGCCTTGATGCCTTCATAATCTCCAACATCACTAAG +
Preference number: 1 (lower is better)
Translates to: QFNCFLKMLLDDICI*NFSLDAFIISNITK
Trigger: CTTAGTGATGTTGGAGATTATGAAGGCATCAAGGCTAAAATTGCAAATGCATATATCATCAAGGAGCATTTTGAGAAAGCAATTGAACTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524172.5
3UTR CCA 90 bp TATTCAGAATTCATAGTAAAGACGAAAGAAAGGCAGAGATCTGCTTaGTTGAATAGACTCCTTTTCCAAATCCTTATTATGAACACTCTG +
Preference number: 1 (lower is better)
Translates to: YSEFIVKTKERQRSA*LNRLLFQILIMNTL
Trigger: CAGAGTGTTCATAATAAGGATTTGGAAAAGGAGTCTATTCAACCAAGCAGATCTCTGCCTTTCTTTCGTCTTTACTATGAATTCTGAATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517710.5
3UTR-3UTR CCA 90 bp TGCTTTCTGATGGTTCAAGGTATGCAAACTTGGTCTCAATGCACAAAATTATTAAGGCGGAGGCTGCAGTaGGCCGAGATTGTGCCACTG +
Preference number: 2 (lower is better)
Translates to: CFLMVQGMQTWSQCTKLLRRRLQ*AEIVPL
Trigger: CAGTGGCACAATCTCGGCCCACTGCAGCCTCCGCCT...TAATAATTTTGTGCATTGAGACCAAGTTTGCATACCTTGAACCATCAGAAAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406452.8
3UTR-3UTR GCA 90 bp GAGCTACATCACGTGATGCCCGTGCCAAACGCCACAGTAACTCTGCATCTTCACTTCATACAGGTAGTCTaGTTGTTCAAGTATTTCTTC +
Preference number: 2 (lower is better)
Translates to: ELHHVMPVPNATVTLHLHFIQVV*LFKYFF
Trigger: GAAGAAATACTTGAACAAGCAGACTACCTGTATGAA...GTGAAGATGCAGAGTTACTGTGGCGTTTGGCACGGGCATCACGTGATGTAGCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522804.5
ENST00000523370.5
ENST00000524172.5
3UTR-3UTR CCA 90 bp AAAAATCCACCTACACACACAGTCTGTCTTTATCTAAGTGGATTCAAGATGCTCGTTAGCCGAGTGTGGTaGTACAACCCTGTAATCCCA +
Preference number: 2 (lower is better)
Translates to: KNPPTHTVCLYLSGFKMLVSRVW*YNPVIP
Trigger: TGGGATTACAGGGTTGTACCACCACACTCGGCTAAC...GAGCATCTTGAATCCACTTAGATAAAGACAGACTGTGTGTGTAGGTGGATTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000406452.8
3UTR-3UTR GCA 90 bp GAATTCATAGTAAAGACGAAAGAAAGGCAGAGATCTGCTTGGTTGAATAGACTCAGTTCGTTTTCAGGGTaGTGGTCTCCCTCAAGTAAG +
Preference number: 2 (lower is better)
Translates to: EFIVKTKERQRSAWLNRLSSFSG*WSPSSK
Trigger: CTTACTTGAGGGAGACCAGCACCCTGAAAACGAACT...GAGTCTATTCAACCAAGCAGATCTCTGCCTTTCTTTCGTCTTTACTATGAATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517710.5
3UTR-3UTR CCA 90 bp GAGGGAAACTGGCCTTCAAAAAGGACTGCGTATACCATAAAAGAGTTAAGTATTTCGTTTTCAGGGTGCTaGTCTCCCTCAAGTAAGAAA +
Preference number: 2 (lower is better)
Translates to: EGNWPSKRTAYTIKELSISFSGC*SPSSKK
Trigger: TTTCTTACTTGAGGGAGACCAGCACCCTGAAAACGA...AATACTTAACTCTTTTATGGTATACGCAGTCCTTTTTGAAGGCCAGTTTCCCTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000517710.5
3UTR-3UTR GCA 90 bp TCTTTGATACCAAGGCATTTCGGCAAATGTATAGCACCAAATACCCATAAGGTGATCACTAAGGCAGATTaGATACCACTTATGAGATGC +
Preference number: 2 (lower is better)
Translates to: SLIPRHFGKCIAPNTHKVITKAD*IPLMRC
Trigger: GCATCTCATAAGTGGTATGCAATCTGCCTTAGTGAT...CACCTTATGGGTATTTGGTGCTATACATTTGCCGAAATGCCTTGGTATCAAAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524172.5
3UTR-3UTR CCA 90 bp GCTTGGTTGAATAGACTCCTTTTCCAAATCCTTATTATGAACACTCTGGTAATTGTGATAGAGGGAAACTaGCCTTCAAAAAGGACTGCG +
Preference number: 2 (lower is better)
Translates to: AWLNRLLFQILIMNTLVIVIEGN*PSKRTA
Trigger: CGCAGTCCTTTTTGAAGGCCAGTTTCCCTCTATCAC...AATTACCAGAGTGTTCATAATAAGGATTTGGAAAAGGAGTCTATTCAACCAAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000517710.5
3UTR CAA 90 bp CAGAAGTTATTGAATATCATTCATTGTAGGTATGATTTAGCAGATTaGACTGAAGAAGGCAGCTTTCCAGTTCGTTTTCAGGGTGCTGGT +
Preference number: 2 (lower is better)
Translates to: QKLLNIIHCRYDLAD*TEEGSFPVRFQGAG
Trigger: ACCAGCACCCTGAAAACGAACTGGAAAGCTGCCTTCTTCAGTCAAATCTGCTAAATCATACCTACAATGAATGATATTCAATAACTTCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517710.5
3UTR-3UTR GCA 90 bp CCAAAATTTGGAAAAACATCCCAAATCCAAGATGCTTCTACTAGTCCCAAGTATAACTTAAAAAGATTTTaGAGTGGTGGCACTCCAGCC +
Preference number: 2 (lower is better)
Translates to: PKFGKTSQIQDASTSPKYNLKRF*SGGTPA
Trigger: GGCTGGAGTGCCACCACTGCAAAATCTTTTTAAGTT...ATACTTGGGACTAGTAGAAGCATCTTGGATTTGGGATGTTTTTCCAAATTTTGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000406452.8
3UTR-3UTR CCA 90 bp TGTGATCAATCCTTAGAAATCTCATACCATTTTGCATTGCTGGTATCCAGGATGTCTTTGCCTGAGCCATaGAGATTTATTTCTACCACT +
Preference number: 2 (lower is better)
Translates to: CDQSLEISYHFALLVSRMSLPEP*RFISTT
Trigger: AGTGGTAGAAATAAATCTCCATGGCTCAGGCAAAGA...CATCCTGGATACCAGCAATGCAAAATGGTATGAGATTTCTAAGGATTGATCACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406452.8
ENST00000519966.5
3UTR CAA 90 bp CCATCTCCAAGATATCTTATTGTGTGTATGCAGGTATTCCAAAATTaGGAAAAACATCCCAAATCCAAGATGCTTCTACTAGTCCCAAGT +
Preference number: 2 (lower is better)
Translates to: PSPRYLIVCMQVFQN*EKHPKSKMLLLVPS
Trigger: ACTTGGGACTAGTAGAAGCATCTTGGATTTGGGATGTTTTTCCAAATTTTGGAATACCTGCATACACACAATAAGATATCTTGGAGATGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000406452.8
3UTR-3UTR TCA 90 bp TGTGATCAATCCTTAGAAATCTCATACCATTTTGCATTGCTGGTATCCAGGATGAATAATCTCTTTGCCTaGGCCATGGAGATTTATTTC +
Preference number: 2 (lower is better)
Translates to: CDQSLEISYHFALLVSRMNNLFA*AMEIYF
Trigger: GAAATAAATCTCCATGGCTCAGGCAAAGAGATTATT...CATCCTGGATACCAGCAATGCAAAATGGTATGAGATTTCTAAGGATTGATCACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406452.8
ENST00000519966.5
3UTR CAA 90 bp ACTCTTAAGTTTTGTGTTCCTTCCATTCCATTAGGGAATAGAACTTaGCATCTGATGACAAATTCAGTTTACCATGAGACTACACCACAT +
Preference number: 2 (lower is better)
Translates to: TLKFCVPSIPLGNRT*HLMTNSVYHETTPH
Trigger: ATGTGGTGTAGTCTCATGGTAAACTGAATTTGTCATCAGATGCAAAGTTCTATTCCCTAATGGAATGGAAGGAACACAAAACTTAAGAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406452.8
3UTR CAA 90 bp TCAGAATTCATAGTAAAGACGAAAGAAAGGCAGAGATCTGCTTGGTaGAATAGACTCCTTTTCCAAATCCTTATTATGAACACTCTGGTA +
Preference number: 2 (lower is better)
Translates to: SEFIVKTKERQRSAW*NRLLFQILIMNTLV
Trigger: TACCAGAGTGTTCATAATAAGGATTTGGAAAAGGAGTCTATTCAACCAAGCAGATCTCTGCCTTTCTTTCGTCTTTACTATGAATTCTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517710.5
3UTR-3UTR GCA 90 bp TGCTTTCTGATGGTTCAAGGTATGCAAACTTGGTCTCAATGCACAAAATTATTATGCTGGTATCCAGGATaGAAAATAATCTCTTTGCCT +
Preference number: 2 (lower is better)
Translates to: CFLMVQGMQTWSQCTKLLCWYPG*KIISLP
Trigger: AGGCAAAGAGATTATTTTGCATCCTGGATACCAGCA...TAATAATTTTGTGCATTGAGACCAAGTTTGCATACCTTGAACCATCAGAAAGCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406452.8
3UTR-3UTR GCA 90 bp GAATTCATAGTAAAGACGAAAGAAAGGCAGAGATCTGCTTGGTTGAATAGACTCTACAAATGGTACCACTaGTGTATAAATTTTGCCATG +
Preference number: 2 (lower is better)
Translates to: EFIVKTKERQRSAWLNRLYKWYH*CINFAM
Trigger: CATGGCAAAATTTATACAGCAGTGGTACCATTTGTA...GAGTCTATTCAACCAAGCAGATCTCTGCCTTTCTTTCGTCTTTACTATGAATTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517710.5
3UTR-3UTR CCA 90 bp TGCTTTCTGATGGTTCAAGGTATGCAAACTTGGTCTCAATGCACAAAATTATTATCTTTGCCTGAGCCATaGAGATTTATTTCTACCACT +
Preference number: 2 (lower is better)
Translates to: CFLMVQGMQTWSQCTKLLSLPEP*RFISTT
Trigger: AGTGGTAGAAATAAATCTCCATGGCTCAGGCAAAGA...TAATAATTTTGTGCATTGAGACCAAGTTTGCATACCTTGAACCATCAGAAAGCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406452.8
3UTR-3UTR GCA 90 bp CCAAAATTTGGAAAAACATCCCAAATCCAAGATGCTTCTACTAGTCCCAAGTATCTACAAATATTTCTTTaGTTGATCTCCCATCCCAAT +
Preference number: 2 (lower is better)
Translates to: PKFGKTSQIQDASTSPKYLQIFL*LISHPN
Trigger: ATTGGGATGGGAGATCAAGCAAAGAAATATTTGTAG...ATACTTGGGACTAGTAGAAGCATCTTGGATTTGGGATGTTTTTCCAAATTTTGG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000406452.8
3UTR-3UTR CCA 90 bp TGCTTTCTGATGGTTCAAGGTATGCAAACTTGGTCTCAATGCACAAAATTATTAACCATTTTGCATTGCTaGTATCCAGGATGCAAAATA +
Preference number: 2 (lower is better)
Translates to: CFLMVQGMQTWSQCTKLLTILHC*YPGCKI
Trigger: TATTTTGCATCCTGGATACCAGCAATGCAAAATGGT...TAATAATTTTGTGCATTGAGACCAAGTTTGCATACCTTGAACCATCAGAAAGCA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000406452.8
3UTR-3UTR CAA 90 bp CCAGCAGAATGCCACATCCCTAGAAAGACCCACTTCCTGGCCCTTCAGCTGCTTACTGAAAGCCTGCCATaGTTGTTGCCGTTTAACAGC +
Preference number: 3 (lower is better)
Translates to: PAECHIPRKTHFLALQLLTESLP*LLPFNS
Trigger: GCTGTTAAACGGCAACAACAATGGCAGGCTTTCAGT...AAGCAGCTGAAGGGCCAGGAAGTGGGTCTTTCTAGGGATGTGGCATTCTGCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406452.8
3UTR TCA 72 bp AATAGCTTTTTCTCCTCTTCTGAGGTTCTGCTAAGCTaGGCTACATCACGTGATGCCCGTGCCAAACGCCAC +
Preference number: 3 (lower is better)
Translates to: NSFFSSSEVLLS*ATSRDARAKRH
Trigger: GTGGCGTTTGGCACGGGCATCACGTGATGTAGCTCAGCTTAGCAGAACCTCAGAAGAGGAGAAAAAGCTATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000522804.5
ENST00000524172.5
3UTR-3UTR CAA 90 bp CATCCAGCAGAATGCCACATCCCTAGAAAGACCCACTTCCTGGCCCTTCAGCTGAAATCTCATACCATTTaGCATTGCTGGTATCCAGGA +
Preference number: 3 (lower is better)
Translates to: HPAECHIPRKTHFLALQLKSHTI*HCWYPG
Trigger: TCCTGGATACCAGCAATGCAAAATGGTATGAGATTT...CAGCTGAAGGGCCAGGAAGTGGGTCTTTCTAGGGATGTGGCATTCTGCTGGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406452.8
3UTR-3UTR CAA 90 bp CCAGCAGAATGCCACATCCCTAGAAAGACCCACTTCCTGGCCCTTCAGCTGCTTCAAATATTTCTTTGCTaGATCTCCCATCCCAATGTG +
Preference number: 3 (lower is better)
Translates to: PAECHIPRKTHFLALQLLQIFLC*ISHPNV
Trigger: CACATTGGGATGGGAGATCAAGCAAAGAAATATTTG...AAGCAGCTGAAGGGCCAGGAAGTGGGTCTTTCTAGGGATGTGGCATTCTGCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406452.8
3UTR-3UTR CAA 90 bp CCAGCAGAATGCCACATCCCTAGAAAGACCCACTTCCTGGCCCTTCAGCTGCTTTCTACAAATATTTCTTaGCTTGATCTCCCATCCCAA +
Preference number: 3 (lower is better)
Translates to: PAECHIPRKTHFLALQLLSTNIS*LDLPSQ
Trigger: TTGGGATGGGAGATCAAGCAAAGAAATATTTGTAGA...AAGCAGCTGAAGGGCCAGGAAGTGGGTCTTTCTAGGGATGTGGCATTCTGCTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406452.8
3UTR TCA 72 bp ACTGAAAGCCTGCCATTGTTGTTGCCGTTTAACAGCTaGTACAGGTTTCTGGTGATGCTACTGTTGCCTAGC +
Preference number: 3 (lower is better)
Translates to: TESLPLLLPFNS*YRFLVMLLLPS
Trigger: GCTAGGCAACAGTAGCATCACCAGAAACCTGTATCAGCTGTTAAACGGCAACAACAATGGCAGGCTTTCAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406452.8
3UTR TCA 72 bp TGTTGTTGCCGTTTAACAGCTGATACAGGTTTCTGGTaGTGCTACTGTTGCCTAGCTACCCTGACCACATTA +
Preference number: 3 (lower is better)
Translates to: CCCRLTADTGFW*CYCCLATLTTL
Trigger: TAATGTGGTCAGGGTAGCTAGGCAACAGTAGCATCACCAGAAACCTGTATCAGCTGTTAAACGGCAACAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406452.8
3UTR TCA 72 bp ATGATGGTGACATCAACCAACCACAAATTACCCACATaGGTGGCTGAGATAATGACACCTTTGCTTTCTGAT +
Preference number: 3 (lower is better)
Translates to: MMVTSTNHKLPT*VAEIMTPLLSD
Trigger: ATCAGAAAGCAAAGGTGTCATTATCTCAGCCACTCATGTGGGTAATTTGTGGTTGGTTGATGTCACCATCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406452.8
3UTR-3UTR CAA 90 bp AAAAATCCACCTACACACACAGTCTGTCTTTATCTAAGTGGATTCAAGATGCTCAAACTTAAAAAGATTTaGCAGTGGTGGCACTCCAGC +
Preference number: 3 (lower is better)
Translates to: KNPPTHTVCLYLSGFKMLKLKKI*QWWHSS
Trigger: GCTGGAGTGCCACCACTGCAAAATCTTTTTAAGTTT...GAGCATCTTGAATCCACTTAGATAAAGACAGACTGTGTGTGTAGGTGGATTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000406452.8
3UTR-3UTR CAA 90 bp AATGTATGTGACAGGTTATGTGATAGAGGGAAACTGGCCTTCAAAAAGGACTGCTATGATTTAGCAGATTaGACTGAAGAAGGCAGCTTT +
Preference number: 3 (lower is better)
Translates to: NVCDRLCDRGKLAFKKDCYDLAD*TEEGSF
Trigger: AAAGCTGCCTTCTTCAGTCAAATCTGCTAAATCATA...GCAGTCCTTTTTGAAGGCCAGTTTCCCTCTATCACATAACCTGTCACATACATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000517710.5
3UTR GCA 72 bp AAGTTTTTCTGTTTCTCCGCTTTCATACAGGTAGTCTaGTTGTTCAAGTATTTCTTCAACTGGGCATCATGG +
Preference number: 3 (lower is better)
Translates to: KFFCFSAFIQVV*LFKYFFNWASW
Trigger: CCATGATGCCCAGTTGAAGAAATACTTGAACAAGCAGACTACCTGTATGAAAGCGGAGAAACAGAAAAACTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000522804.5
ENST00000523370.5
3UTR-3UTR CAA 90 bp CCAAAATTTGGAAAAACATCCCAAATCCAAGATGCTTCTACTAGTCCCAAGTATTCATACCATTTTGCATaGCTGGTATCCAGGATGCAA +
Preference number: 3 (lower is better)
Translates to: PKFGKTSQIQDASTSPKYSYHFA*LVSRMQ
Trigger: TTGCATCCTGGATACCAGCAATGCAAAATGGTATGA...ATACTTGGGACTAGTAGAAGCATCTTGGATTTGGGATGTTTTTCCAAATTTTGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000406452.8
3UTR GCA 72 bp CTTGGGTCCCATCTCCAAGATATCTTATTGTGTGTATaGAGGTATTCCAAAATTTGGAAAAACATCCCAAAT +
Preference number: 3 (lower is better)
Translates to: LGSHLQDILLCV*RYSKIWKNIPN
Trigger: ATTTGGGATGTTTTTCCAAATTTTGGAATACCTGCATACACACAATAAGATATCTTGGAGATGGGACCCAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000406452.8
3UTR GCA 72 bp CAGTACCTCAAAATGCTCCTTGATGATATATGCATTTaGAATTTTAGCCTTGATGCCTTCATAATCTCCAAC +
Preference number: 3 (lower is better)
Translates to: QYLKMLLDDICI*NFSLDAFIISN
Trigger: GTTGGAGATTATGAAGGCATCAAGGCTAAAATTGCAAATGCATATATCATCAAGGAGCATTTTGAGGTACTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522804.5
3UTR CCA 72 bp TATCCAGGATGCAAAATAATCTCTTTGCCTGAGCCATaGAGATTTATTTCTACCACTCTTATGGCGATTATT +
Preference number: 3 (lower is better)
Translates to: YPGCKIISLPEP*RFISTTLMAII
Trigger: AATAATCGCCATAAGAGTGGTAGAAATAAATCTCCATGGCTCAGGCAAAGAGATTATTTTGCATCCTGGATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406452.8
ENST00000519966.5
3UTR GCA 72 bp AAGTTTTTCTGTTTCTCCGCTTTCATACAGGTAGTCTaGTTGTTCAAGTATTTCTTCAACTTCATTTCAGGA +
Preference number: 3 (lower is better)
Translates to: KFFCFSAFIQVV*LFKYFFNFISG
Trigger: TCCTGAAATGAAGTTGAAGAAATACTTGAACAAGCAGACTACCTGTATGAAAGCGGAGAAACAGAAAAACTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524172.5
CDS-3UTR GCA 90 bp CCAGCAGAATGCCACATCCCTAGAAAGACCCACTTCCTGGCCCTTCAGCTGCTTAGTGGGCCGAGATTGTaGCACTGCACACCAGCCTGG +
Preference number: 4 (lower is better)
Translates to: PAECHIPRKTHFLALQLLSGPRL*HCTPAW
Trigger: CCAGGCTGGTGTGCAGTGGCACAATCTCGGCCCACT...AAGCAGCTGAAGGGCCAGGAAGTGGGTCTTTCTAGGGATGTGGCATTCTGCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406452.8
CDS-3UTR CCA 90 bp GCTACATCACGTGATGCCCGTGCCAAACGCCACAGTAACTCTGCATCTTCACTTGTAGCAGGCAGCTTCTaGGGCGCGTGGGGGCAAACC +
Preference number: 4 (lower is better)
Translates to: ATSRDARAKRHSNSASSLVAGSF*GAWGQT
Trigger: GGTTTGCCCCCACGCGCCCCAGAAGCTGCCTGCTAC...AAGTGAAGATGCAGAGTTACTGTGGCGTTTGGCACGGGCATCACGTGATGTAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524172.5
CDS-3UTR GCA 90 bp TTAAAAAGCCATCCAGCAGAATGCCACATCCCTAGAAAGACCCACTTCCTGGCCGCCAGCGCCATGACCTaGAACTTGCGGGCTGACCCT +
Preference number: 4 (lower is better)
Translates to: LKSHPAECHIPRKTHFLAASAMT*NLRADP
Trigger: AGGGTCAGCCCGCAAGTTGCAGGTCATGGCGCTGGC...GGCCAGGAAGTGGGTCTTTCTAGGGATGTGGCATTCTGCTGGATGGCTTTTTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000406452.8
CDS-3UTR TCA 90 bp TTAAAAAGCCATCCAGCAGAATGCCACATCCCTAGAAAGACCCACTTCCTGGCCCTGCAACTTGCGGGCTaGCCCTGCACTACTTCAGGC +
Preference number: 4 (lower is better)
Translates to: LKSHPAECHIPRKTHFLALQLAG*PCTTSG
Trigger: GCCTGAAGTAGTGCAGGGTCAGCCCGCAAGTTGCAG...GGCCAGGAAGTGGGTCTTTCTAGGGATGTGGCATTCTGCTGGATGGCTTTTTAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000406452.8
CDS-3UTR TCA 90 bp GCTACATCACGTGATGCCCGTGCCAAACGCCACAGTAACTCTGCATCTTCACTTCTGAGCTACATCACGTaGTGCCCGTGCCAAACGCCA +
Preference number: 4 (lower is better)
Translates to: ATSRDARAKRHSNSASSLLSYIT*CPCQTP
Trigger: TGGCGTTTGGCACGGGCATCACGTGATGTAGCTCAG...AAGTGAAGATGCAGAGTTACTGTGGCGTTTGGCACGGGCATCACGTGATGTAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522804.5
ENST00000523370.5
ENST00000524172.5
CDS-3UTR TCA 90 bp CATCCAGCAGAATGCCACATCCCTAGAAAGACCCACTTCCTGGCCCTTCAGCTGGAGGTTCTGCTAAGCTaGGCTACATCACGTGATGCC +
Preference number: 4 (lower is better)
Translates to: HPAECHIPRKTHFLALQLEVLLS*ATSRDA
Trigger: GGCATCACGTGATGTAGCTCAGCTTAGCAGAACCTC...CAGCTGAAGGGCCAGGAAGTGGGTCTTTCTAGGGATGTGGCATTCTGCTGGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406452.8
CDS-3UTR CCA 90 bp TTAAAAAGCCATCCAGCAGAATGCCACATCCCTAGAAAGACCCACTTCCTGGCCGACTGGCCTCCAGAATaGCCTCGAAGCGCCAGCCTA +
Preference number: 4 (lower is better)
Translates to: LKSHPAECHIPRKTHFLADWPPE*PRSASL
Trigger: TAGGCTGGCGCTTCGAGGCCATTCTGGAGGCCAGTC...GGCCAGGAAGTGGGTCTTTCTAGGGATGTGGCATTCTGCTGGATGGCTTTTTAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000523911.5
CDS-3UTR CCA 90 bp CCAGCAGAATGCCACATCCCTAGAAAGACCCACTTCCTGGCCCTTCAGCTGCTTCTTCAACTTTGGCTGTaGCATGAACCACAGCAGCCT +
Preference number: 4 (lower is better)
Translates to: PAECHIPRKTHFLALQLLLQLWL*HEPQQP
Trigger: AGGCTGCTGTGGTTCATGCCACAGCCAAAGTTGAAG...AAGCAGCTGAAGGGCCAGGAAGTGGGTCTTTCTAGGGATGTGGCATTCTGCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406452.8
CDS-3UTR GCA 90 bp TTCTGTTTCTCCGCTTTCATACAGGTAGTCTGCTTGTTCAAGTATTTCTTCAACCGCAATGCCCGCGGCTaGCCGAAGTCCCCGCAGGGA +
Preference number: 4 (lower is better)
Translates to: FCFSAFIQVVCLFKYFFNRNARG*PKSPQG
Trigger: TCCCTGCGGGGACTTCGGGCAGCCGCGGGCATTGCG...GTTGAAGAAATACTTGAACAAGCAGACTACCTGTATGAAAGCGGAGAAACAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522804.5
CDS-3UTR GCA 90 bp ATCTCATACCATTTTGCATTGCTGGTATCCAGGATGCAAAATAATCTCTTTGCCCGACAGGGGCCGCAATaGCCGCGGCTGCCCGAAGTC +
Preference number: 4 (lower is better)
Translates to: ISYHFALLVSRMQNNLFARQGPQ*PRLPEV
Trigger: GACTTCGGGCAGCCGCGGGCATTGCGGCCCCTGTCG...GGCAAAGAGATTATTTTGCATCCTGGATACCAGCAATGCAAAATGGTATGAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000406452.8
ENST00000519966.5
CDS-3UTR CCA 90 bp ATTTTAAAAAGCCATCCAGCAGAATGCCACATCCCTAGAAAGACCCACTTCCTGAGGCGGAGGCTGCAGTaGGCCGAGATTGTGCCACTG +
Preference number: 4 (lower is better)
Translates to: ILKSHPAECHIPRKTHFLRRRLQ*AEIVPL
Trigger: CAGTGGCACAATCTCGGCCCACTGCAGCCTCCGCCT...CAGGAAGTGGGTCTTTCTAGGGATGTGGCATTCTGCTGGATGGCTTTTTAAAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000406452.8
CDS-3UTR GCA 90 bp ACAGGTAGTCTGCTTGTTCAAGTATTTCTTCAACTGGGCATCATGGCACATGCCCCAGGAGGCAGTGGTTaGAGTGAGCTGAGATCGCAC +
Preference number: 4 (lower is better)
Translates to: TGSLLVQVFLQLGIMAHAPGGSG*SELRSH
Trigger: GTGCGATCTCAGCTCACTGCAACCACTGCCTCCTGG...GGCATGTGCCATGATGCCCAGTTGAAGAAATACTTGAACAAGCAGACTACCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000522804.5
ENST00000523370.5
CDS-3UTR CCA 90 bp TTAAAAAGCCATCCAGCAGAATGCCACATCCCTAGAAAGACCCACTTCCTGGCCGAAAGACCCACTTCCTaGCCCTTCAGCTGCTTCTGT +
Preference number: 4 (lower is better)
Translates to: LKSHPAECHIPRKTHFLAERPTS*PFSCFC
Trigger: ACAGAAGCAGCTGAAGGGCCAGGAAGTGGGTCTTTC...GGCCAGGAAGTGGGTCTTTCTAGGGATGTGGCATTCTGCTGGATGGCTTTTTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000406452.8
ENST00000519639.5
ENST00000523911.5
CDS-3UTR CCA 90 bp CCCATTTTAAAAAGCCATCCAGCAGAATGCCACATCCCTAGAAAGACCCACTTCGAAGCGCCAGCCTACTaGCAAGGAGCTGACATGCAG +
Preference number: 4 (lower is better)
Translates to: PILKSHPAECHIPRKTHFEAPAY*QGADMQ
Trigger: CTGCATGTCAGCTCCTTGCCAGTAGGCTGGCGCTTC...GAAGTGGGTCTTTCTAGGGATGTGGCATTCTGCTGGATGGCTTTTTAAAATGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000523911.5
CDS-3UTR CCA 90 bp CTCCGCTTTCATACAGGTAGTCTGCTTGTTCAAGTATTTCTTCAACTGGGCATCGACTGGCCTCCAGAATaGCCTCGAAGCGCCAGCCTA +
Preference number: 4 (lower is better)
Translates to: LRFHTGSLLVQVFLQLGIDWPPE*PRSASL
Trigger: TAGGCTGGCGCTTCGAGGCCATTCTGGAGGCCAGTC...GATGCCCAGTTGAAGAAATACTTGAACAAGCAGACTACCTGTATGAAAGCGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523370.5
CDS-3UTR TCA 90 bp ATCTCATACCATTTTGCATTGCTGGTATCCAGGATGCAAAATAATCTCTTTGCCGAGCAGCCAGCGCCATaGCCTGCAACTTGCGGGCTG +
Preference number: 4 (lower is better)
Translates to: ISYHFALLVSRMQNNLFAEQPAP*PATCGL
Trigger: CAGCCCGCAAGTTGCAGGTCATGGCGCTGGCTGCTC...GGCAAAGAGATTATTTTGCATCCTGGATACCAGCAATGCAAAATGGTATGAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406452.8
ENST00000519966.5
CDS-3UTR TCA 90 bp TGTGATCAATCCTTAGAAATCTCATACCATTTTGCATTGCTGGTATCCAGGATGGAGCAGCCAGCGCCATaGCCTGCAACTTGCGGGCTG +
Preference number: 4 (lower is better)
Translates to: CDQSLEISYHFALLVSRMEQPAP*PATCGL
Trigger: CAGCCCGCAAGTTGCAGGTCATGGCGCTGGCTGCTC...CATCCTGGATACCAGCAATGCAAAATGGTATGAGATTTCTAAGGATTGATCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406452.8
ENST00000519966.5
CDS-3UTR TCA 90 bp ATTTTAAAAAGCCATCCAGCAGAATGCCACATCCCTAGAAAGACCCACTTCCTGCTGAGCTACATCACGTaGTGCCCGTGCCAAACGCCA +
Preference number: 4 (lower is better)
Translates to: ILKSHPAECHIPRKTHFLLSYIT*CPCQTP
Trigger: TGGCGTTTGGCACGGGCATCACGTGATGTAGCTCAG...CAGGAAGTGGGTCTTTCTAGGGATGTGGCATTCTGCTGGATGGCTTTTTAAAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000406452.8
ENST00000523911.5
CDS-3UTR TCA 90 bp CCAGCAGAATGCCACATCCCTAGAAAGACCCACTTCCTGGCCCTTCAGCTGCTTAAACTTGTAAGCAACTaGGCAGCTTCTGTCTGTATC +
Preference number: 4 (lower is better)
Translates to: PAECHIPRKTHFLALQLLKLVSN*AASVCI
Trigger: GATACAGACAGAAGCTGCTCAGTTGCTTACAAGTTT...AAGCAGCTGAAGGGCCAGGAAGTGGGTCTTTCTAGGGATGTGGCATTCTGCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406452.8
CDS-3UTR GCA 90 bp GAAATCTCATACCATTTTGCATTGCTGGTATCCAGGATGCAAAATAATCTCTTTCGCAATGCCCGCGGCTaGCCGAAGTCCCCGCAGGGA +
Preference number: 4 (lower is better)
Translates to: EISYHFALLVSRMQNNLFRNARG*PKSPQG
Trigger: TCCCTGCGGGGACTTCGGGCAGCCGCGGGCATTGCG...AAAGAGATTATTTTGCATCCTGGATACCAGCAATGCAAAATGGTATGAGATTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000406452.8
ENST00000519966.5
CDS-3UTR GCA 90 bp GAAATCTCATACCATTTTGCATTGCTGGTATCCAGGATGCAAAATAATCTCTTTCGACAGGGGCCGCAATaGCCGCGGCTGCCCGAAGTC +
Preference number: 4 (lower is better)
Translates to: EISYHFALLVSRMQNNLFRQGPQ*PRLPEV
Trigger: GACTTCGGGCAGCCGCGGGCATTGCGGCCCCTGTCG...AAAGAGATTATTTTGCATCCTGGATACCAGCAATGCAAAATGGTATGAGATTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000406452.8
ENST00000519966.5
CDS-3UTR GCA 90 bp AAAGTTTTTCTGTTTCTCCGCTTTCATACAGGTAGTCTGCTTGTTCAAGTATTTCGACAGGGGCCGCAATaGCCGCGGCTGCCCGAAGTC +
Preference number: 4 (lower is better)
Translates to: KVFLFLRFHTGSLLVQVFRQGPQ*PRLPEV
Trigger: GACTTCGGGCAGCCGCGGGCATTGCGGCCCCTGTCG...AAATACTTGAACAAGCAGACTACCTGTATGAAAGCGGAGAAACAGAAAAACTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000522804.5
CDS-3UTR GCA 90 bp TTAAAAAGCCATCCAGCAGAATGCCACATCCCTAGAAAGACCCACTTCCTGGCCTCCTGGCCCTTCAGCTaGTTCTGTTTCTCTTCACCT +
Preference number: 4 (lower is better)
Translates to: LKSHPAECHIPRKTHFLASWPFS*FCFSSP
Trigger: AGGTGAAGAGAAACAGAAGCAGCTGAAGGGCCAGGA...GGCCAGGAAGTGGGTCTTTCTAGGGATGTGGCATTCTGCTGGATGGCTTTTTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000406452.8
ENST00000519639.5
ENST00000523911.5
CDS-3UTR GCA 90 bp GGGTTAGCAACTGATAAAGTTTTTCTGTTTCTCCGCTTTCATACAGGTAGTCTGGGCAAGGAGCTGACATaGAGCCCGGAGTCAGCTCCC +
Preference number: 4 (lower is better)
Translates to: GLATDKVFLFLRFHTGSLGKELT*SPESAP
Trigger: GGGAGCTGACTCCGGGCTGCATGTCAGCTCCTTGCC...CAGACTACCTGTATGAAAGCGGAGAAACAGAAAAACTTTATCAGTTGCTAACCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000523370.5
CDS-3UTR CCA 90 bp CATCCAGCAGAATGCCACATCCCTAGAAAGACCCACTTCCTGGCCCTTCAGCTGTTTGCTGTAGAAGTTTaGATCCACTTGTTCTGCCCT +
Preference number: 4 (lower is better)
Translates to: HPAECHIPRKTHFLALQLFAVEV*IHLFCP
Trigger: AGGGCAGAACAAGTGGATCCAAACTTCTACAGCAAA...CAGCTGAAGGGCCAGGAAGTGGGTCTTTCTAGGGATGTGGCATTCTGCTGGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406452.8
CDS-3UTR TCA 90 bp TTTCTCCGCTTTCATACAGGTAGTCTGCTTGTTCAAGTATTTCTTCAACTGGGCCTGAGCTACATCACGTaGTGCCCGTGCCAAACGCCA +
Preference number: 4 (lower is better)
Translates to: FLRFHTGSLLVQVFLQLGLSYIT*CPCQTP
Trigger: TGGCGTTTGGCACGGGCATCACGTGATGTAGCTCAG...GCCCAGTTGAAGAAATACTTGAACAAGCAGACTACCTGTATGAAAGCGGAGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522804.5
ENST00000523370.5
CDS-3UTR TCA 90 bp GGTAGTCTGCTTGTTCAAGTATTTCTTCAACTGGGCATCATGGCACATGCCTGTGAGGTTCTGCTAAGCTaGGCTACATCACGTGATGCC +
Preference number: 4 (lower is better)
Translates to: GSLLVQVFLQLGIMAHACEVLLS*ATSRDA
Trigger: GGCATCACGTGATGTAGCTCAGCTTAGCAGAACCTC...ACAGGCATGTGCCATGATGCCCAGTTGAAGAAATACTTGAACAAGCAGACTACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522804.5
ENST00000523370.5
CDS-3UTR TCA 90 bp CCCATTTTAAAAAGCCATCCAGCAGAATGCCACATCCCTAGAAAGACCCACTTCGAGGTTCTGCTAAGCTaGGCTACATCACGTGATGCC +
Preference number: 4 (lower is better)
Translates to: PILKSHPAECHIPRKTHFEVLLS*ATSRDA
Trigger: GGCATCACGTGATGTAGCTCAGCTTAGCAGAACCTC...GAAGTGGGTCTTTCTAGGGATGTGGCATTCTGCTGGATGGCTTTTTAAAATGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000406452.8
ENST00000523911.5
CDS-3UTR TCA 90 bp CATCCAGCAGAATGCCACATCCCTAGAAAGACCCACTTCCTGGCCCTTCAGCTGACCCATAAGGTGAATTaGAGTAGCATCTTTAGGGTT +
Preference number: 4 (lower is better)
Translates to: HPAECHIPRKTHFLALQLTHKVN*SSIFRV
Trigger: AACCCTAAAGATGCTACTTCAATTCACCTTATGGGT...CAGCTGAAGGGCCAGGAAGTGGGTCTTTCTAGGGATGTGGCATTCTGCTGGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406452.8
CDS-3UTR TCA 90 bp TTTCTCCGCTTTCATACAGGTAGTCTGCTTGTTCAAGTATTTCTTCAACTGGGCGTGGTTGCAGTGAGCTaGGATCGCACCTCCACACTC +
Preference number: 4 (lower is better)
Translates to: FLRFHTGSLLVQVFLQLGVVAVS*DRTSTL
Trigger: GAGTGTGGAGGTGCGATCTCAGCTCACTGCAACCAC...GCCCAGTTGAAGAAATACTTGAACAAGCAGACTACCTGTATGAAAGCGGAGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522804.5
ENST00000523370.5
CDS-3UTR TCA 90 bp TTTCTCCGCTTTCATACAGGTAGTCTGCTTGTTCAAGTATTTCTTCAACTGGGCAGGCAGTGGTTGCAGTaGGCTGAGATCGCACCTCCA +
Preference number: 4 (lower is better)
Translates to: FLRFHTGSLLVQVFLQLGRQWLQ*AEIAPP
Trigger: TGGAGGTGCGATCTCAGCTCACTGCAACCACTGCCT...GCCCAGTTGAAGAAATACTTGAACAAGCAGACTACCTGTATGAAAGCGGAGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522804.5
ENST00000523370.5
CDS-3UTR GCA 90 bp ATCTCATACCATTTTGCATTGCTGGTATCCAGGATGCAAAATAATCTCTTTGCCGCCAGCGCCATGACCTaGAACTTGCGGGCTGACCCT +
Preference number: 4 (lower is better)
Translates to: ISYHFALLVSRMQNNLFAASAMT*NLRADP
Trigger: AGGGTCAGCCCGCAAGTTGCAGGTCATGGCGCTGGC...GGCAAAGAGATTATTTTGCATCCTGGATACCAGCAATGCAAAATGGTATGAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406452.8
ENST00000519966.5
CDS-3UTR GCA 90 bp TTAAAAAGCCATCCAGCAGAATGCCACATCCCTAGAAAGACCCACTTCCTGGCCATCCTCCTCTGTGTGTaGTGGATAGTCCTTGGCTTT +
Preference number: 4 (lower is better)
Translates to: LKSHPAECHIPRKTHFLAILLCV*WIVLGF
Trigger: AAAGCCAAGGACTATCCAGCACACACAGAGGAGGAT...GGCCAGGAAGTGGGTCTTTCTAGGGATGTGGCATTCTGCTGGATGGCTTTTTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000406452.8
ENST00000519639.5
ENST00000523911.5
CDS-3UTR CCA 90 bp TCCGCTTTCATACAGGTAGTCTGCTTGTTCAAGTATTTCTTCAACTGGGCATCAGAAGCGCCAGCCTACTaGCAAGGAGCTGACATGCAG +
Preference number: 4 (lower is better)
Translates to: SAFIQVVCLFKYFFNWASEAPAY*QGADMQ
Trigger: CTGCATGTCAGCTCCTTGCCAGTAGGCTGGCGCTTC...TGATGCCCAGTTGAAGAAATACTTGAACAAGCAGACTACCTGTATGAAAGCGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523370.5
CDS-3UTR CCA 90 bp GGTAGTCTGCTTGTTCAAGTATTTCTTCAACTGGGCATCATGGCACATGCCTGTGAGACTCTTTGGCTGTaGCATGAACCACAGCAGCCT +
Preference number: 4 (lower is better)
Translates to: GSLLVQVFLQLGIMAHACETLWL*HEPQQP
Trigger: AGGCTGCTGTGGTTCATGCCACAGCCAAAGAGTCTC...ACAGGCATGTGCCATGATGCCCAGTTGAAGAAATACTTGAACAAGCAGACTACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522804.5
ENST00000523370.5
CDS-3UTR TCA 90 bp TGTGATCAATCCTTAGAAATCTCATACCATTTTGCATTGCTGGTATCCAGGATGCTGCAACTTGCGGGCTaGCCCTGCACTACTTCAGGC +
Preference number: 4 (lower is better)
Translates to: CDQSLEISYHFALLVSRMLQLAG*PCTTSG
Trigger: GCCTGAAGTAGTGCAGGGTCAGCCCGCAAGTTGCAG...CATCCTGGATACCAGCAATGCAAAATGGTATGAGATTTCTAAGGATTGATCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406452.8
ENST00000519966.5
CDS-3UTR TCA 90 bp TTCTGTTTCTCCGCTTTCATACAGGTAGTCTGCTTGTTCAAGTATTTCTTCAACCTGCAACTTGCGGGCTaGCCCTGCACTACTTCAGGC +
Preference number: 4 (lower is better)
Translates to: FCFSAFIQVVCLFKYFFNLQLAG*PCTTSG
Trigger: GCCTGAAGTAGTGCAGGGTCAGCCCGCAAGTTGCAG...GTTGAAGAAATACTTGAACAAGCAGACTACCTGTATGAAAGCGGAGAAACAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522804.5
CDS-3UTR TCA 90 bp CATCCAGCAGAATGCCACATCCCTAGAAAGACCCACTTCCTGGCCCTTCAGCTGAATAATCTCTTTGCCTaGGCCATGGAGATTTATTTC +
Preference number: 4 (lower is better)
Translates to: HPAECHIPRKTHFLALQLNNLFA*AMEIYF
Trigger: GAAATAAATCTCCATGGCTCAGGCAAAGAGATTATT...CAGCTGAAGGGCCAGGAAGTGGGTCTTTCTAGGGATGTGGCATTCTGCTGGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406452.8
CDS-3UTR TCA 90 bp TGTTTCTCCGCTTTCATACAGGTAGTCTGCTTGTTCAAGTATTTCTTCAACTGGGTGGTTGCAGTGAGCTaGGATCGCACCTCCACACTC +
Preference number: 4 (lower is better)
Translates to: CFSAFIQVVCLFKYFFNWVVAVS*DRTSTL
Trigger: GAGTGTGGAGGTGCGATCTCAGCTCACTGCAACCAC...CCAGTTGAAGAAATACTTGAACAAGCAGACTACCTGTATGAAAGCGGAGAAACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522804.5
ENST00000523370.5
CDS-3UTR TCA 90 bp GGGTTAGCAACTGATAAAGTTTTTCTGTTTCTCCGCTTTCATACAGGTAGTCTGGGTGGGAGGATCACTTaGACCCAGGAGGCAGTGGTT +
Preference number: 4 (lower is better)
Translates to: GLATDKVFLFLRFHTGSLGGRIT*TQEAVV
Trigger: AACCACTGCCTCCTGGGTTCAAGTGATCCTCCCACC...CAGACTACCTGTATGAAAGCGGAGAAACAGAAAAACTTTATCAGTTGCTAACCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000522804.5
ENST00000523370.5
CDS-3UTR GCA 90 bp ATTTGCAATTTTAGCCTTGATGCCTTCATAATCTCCAACATCACTAAGGCAGATGCCAGCGCCATGACCTaGAACTTGCGGGCTGACCCT +
Preference number: 4 (lower is better)
Translates to: ICNFSLDAFIISNITKADASAMT*NLRADP
Trigger: AGGGTCAGCCCGCAAGTTGCAGGTCATGGCGCTGGC...ATCTGCCTTAGTGATGTTGGAGATTATGAAGGCATCAAGGCTAAAATTGCAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522804.5
CDS-3UTR GCA 90 bp CCCATTTTAAAAAGCCATCCAGCAGAATGCCACATCCCTAGAAAGACCCACTTCTCCTGGCCCTTCAGCTaGTTCTGTTTCTCTTCACCT +
Preference number: 4 (lower is better)
Translates to: PILKSHPAECHIPRKTHFSWPFS*FCFSSP
Trigger: AGGTGAAGAGAAACAGAAGCAGCTGAAGGGCCAGGA...GAAGTGGGTCTTTCTAGGGATGTGGCATTCTGCTGGATGGCTTTTTAAAATGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000406452.8
ENST00000519639.5
ENST00000523911.5
CDS-3UTR CCA 90 bp CCCATTTTAAAAAGCCATCCAGCAGAATGCCACATCCCTAGAAAGACCCACTTCGTTAGCCGAGTGTGGTaGTACAACCCTGTAATCCCA +
Preference number: 4 (lower is better)
Translates to: PILKSHPAECHIPRKTHFVSRVW*YNPVIP
Trigger: TGGGATTACAGGGTTGTACCACCACACTCGGCTAAC...GAAGTGGGTCTTTCTAGGGATGTGGCATTCTGCTGGATGGCTTTTTAAAATGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000406452.8
CDS-3UTR CCA 90 bp ATTTTAAAAAGCCATCCAGCAGAATGCCACATCCCTAGAAAGACCCACTTCCTGGAAAGACCCACTTCCTaGCCCTTCAGCTGCTTCTGT +
Preference number: 4 (lower is better)
Translates to: ILKSHPAECHIPRKTHFLERPTS*PFSCFC
Trigger: ACAGAAGCAGCTGAAGGGCCAGGAAGTGGGTCTTTC...CAGGAAGTGGGTCTTTCTAGGGATGTGGCATTCTGCTGGATGGCTTTTTAAAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000406452.8
ENST00000519639.5
ENST00000523911.5
CDS-3UTR TCA 90 bp AAAAATCCACCTACACACACAGTCTGTCTTTATCTAAGTGGATTCAAGATGCTCCTGAGCTACATCACGTaGTGCCCGTGCCAAACGCCA +
Preference number: 4 (lower is better)
Translates to: KNPPTHTVCLYLSGFKMLLSYIT*CPCQTP
Trigger: TGGCGTTTGGCACGGGCATCACGTGATGTAGCTCAG...GAGCATCTTGAATCCACTTAGATAAAGACAGACTGTGTGTGTAGGTGGATTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000406452.8
CDS-3UTR TCA 90 bp ATCTCATACCATTTTGCATTGCTGGTATCCAGGATGCAAAATAATCTCTTTGCCCTGAGCTACATCACGTaGTGCCCGTGCCAAACGCCA +
Preference number: 4 (lower is better)
Translates to: ISYHFALLVSRMQNNLFALSYIT*CPCQTP
Trigger: TGGCGTTTGGCACGGGCATCACGTGATGTAGCTCAG...GGCAAAGAGATTATTTTGCATCCTGGATACCAGCAATGCAAAATGGTATGAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406452.8
ENST00000519966.5
CDS-3UTR TCA 90 bp CAACTGATAAAGTTTTTCTGTTTCTCCGCTTTCATACAGGTAGTCTGCTTGTTCCTGAGCTACATCACGTaGTGCCCGTGCCAAACGCCA +
Preference number: 4 (lower is better)
Translates to: QLIKFFCFSAFIQVVCLFLSYIT*CPCQTP
Trigger: TGGCGTTTGGCACGGGCATCACGTGATGTAGCTCAG...GAACAAGCAGACTACCTGTATGAAAGCGGAGAAACAGAAAAACTTTATCAGTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000522804.5
ENST00000523370.5
ENST00000524172.5
CDS-3UTR TCA 90 bp GAGGGAAACTGGCCTTCAAAAAGGACTGCGTATACCATAAAAGAGTTAAGTATTCGTCACGGACCAATGTaGCACGTGGGGAATCAGGCT +
Preference number: 4 (lower is better)
Translates to: EGNWPSKRTAYTIKELSIRHGPM*HVGNQA
Trigger: AGCCTGATTCCCCACGTGTCACATTGGTCCGTGACG...AATACTTAACTCTTTTATGGTATACGCAGTCCTTTTTGAAGGCCAGTTTCCCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000517710.5
CDS-3UTR TCA 90 bp TTCTGTTTCTCCGCTTTCATACAGGTAGTCTGCTTGTTCAAGTATTTCTTCAACGGTGGGAGGATCACTTaGACCCAGGAGGCAGTGGTT +
Preference number: 4 (lower is better)
Translates to: FCFSAFIQVVCLFKYFFNGGRIT*TQEAVV
Trigger: AACCACTGCCTCCTGGGTTCAAGTGATCCTCCCACC...GTTGAAGAAATACTTGAACAAGCAGACTACCTGTATGAAAGCGGAGAAACAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522804.5
ENST00000523370.5
CDS-3UTR GCA 90 bp TTAAAAAGCCATCCAGCAGAATGCCACATCCCTAGAAAGACCCACTTCCTGGCCAACTTAAAAAGATTTTaGAGTGGTGGCACTCCAGCC +
Preference number: 4 (lower is better)
Translates to: LKSHPAECHIPRKTHFLANLKRF*SGGTPA
Trigger: GGCTGGAGTGCCACCACTGCAAAATCTTTTTAAGTT...GGCCAGGAAGTGGGTCTTTCTAGGGATGTGGCATTCTGCTGGATGGCTTTTTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000406452.8
CDS-3UTR CCA 90 bp TTAAAAAGCCATCCAGCAGAATGCCACATCCCTAGAAAGACCCACTTCCTGGCCGTATTTCTTCAACTTTaGCTGTGGCATGAACCACAG +
Preference number: 4 (lower is better)
Translates to: LKSHPAECHIPRKTHFLAVFLQL*LWHEPQ
Trigger: CTGTGGTTCATGCCACAGCCAAAGTTGAAGAAATAC...GGCCAGGAAGTGGGTCTTTCTAGGGATGTGGCATTCTGCTGGATGGCTTTTTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000406452.8
ENST00000523911.5
CDS-3UTR CCA 90 bp TTAAAAAGCCATCCAGCAGAATGCCACATCCCTAGAAAGACCCACTTCCTGGCCTTTGCTGTAGAAGTTTaGATCCACTTGTTCTGCCCT +
Preference number: 4 (lower is better)
Translates to: LKSHPAECHIPRKTHFLAFAVEV*IHLFCP
Trigger: AGGGCAGAACAAGTGGATCCAAACTTCTACAGCAAA...GGCCAGGAAGTGGGTCTTTCTAGGGATGTGGCATTCTGCTGGATGGCTTTTTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000406452.8
ENST00000519639.5
CDS-3UTR CCA 90 bp CAACTGATAAAGTTTTTCTGTTTCTCCGCTTTCATACAGGTAGTCTGCTTGTTCGCCGCACTTTGGCTGTaGCATGAACCACAGCAGCCT +
Preference number: 4 (lower is better)
Translates to: QLIKFFCFSAFIQVVCLFAALWL*HEPQQP
Trigger: AGGCTGCTGTGGTTCATGCCACAGCCAAAGTGCGGC...GAACAAGCAGACTACCTGTATGAAAGCGGAGAAACAGAAAAACTTTATCAGTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524172.5
CDS-3UTR CCA 90 bp ATTTTAAAAAGCCATCCAGCAGAATGCCACATCCCTAGAAAGACCCACTTCCTGTTTTCAGTAAGCGACTaGCCTCCAGAATGGCCTCGA +
Preference number: 4 (lower is better)
Translates to: ILKSHPAECHIPRKTHFLFSVSD*PPEWPR
Trigger: TCGAGGCCATTCTGGAGGCCAGTCGCTTACTGAAAA...CAGGAAGTGGGTCTTTCTAGGGATGTGGCATTCTGCTGGATGGCTTTTTAAAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000523911.5
CDS-3UTR CCA 90 bp TCCGCTTTCATACAGGTAGTCTGCTTGTTCAAGTATTTCTTCAACTGGGCATCACACAGCGAGACTCTTTaGCTGTGGCATGAACCACAG +
Preference number: 4 (lower is better)
Translates to: SAFIQVVCLFKYFFNWASHSETL*LWHEPQ
Trigger: CTGTGGTTCATGCCACAGCCAAAGAGTCTCGCTGTG...TGATGCCCAGTTGAAGAAATACTTGAACAAGCAGACTACCTGTATGAAAGCGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522804.5
ENST00000523370.5
CDS-3UTR TCA 90 bp TTAAAAAGCCATCCAGCAGAATGCCACATCCCTAGAAAGACCCACTTCCTGGCCTTAGCAATTCTTCTTTaGTACCAAGGCATTTCGGCA +
Preference number: 4 (lower is better)
Translates to: LKSHPAECHIPRKTHFLALAILL*YQGISA
Trigger: TGCCGAAATGCCTTGGTATCAAAGAAGAATTGCTAA...GGCCAGGAAGTGGGTCTTTCTAGGGATGTGGCATTCTGCTGGATGGCTTTTTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000406452.8
ENST00000519639.5
ENST00000523911.5
CDS-3UTR TCA 90 bp AAATCTCATACCATTTTGCATTGCTGGTATCCAGGATGCAAAATAATCTCTTTGGGCGGGCAGATCACTTaGGGCCAGGAGTTTGAGACC +
Preference number: 4 (lower is better)
Translates to: KSHTILHCWYPGCKIISLGGQIT*GQEFET
Trigger: GGTCTCAAACTCCTGGCCTCAAGTGATCTGCCCGCC...CAAAGAGATTATTTTGCATCCTGGATACCAGCAATGCAAAATGGTATGAGATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406452.8
CDS-3UTR TCA 90 bp AAAGTTTTTCTGTTTCTCCGCTTTCATACAGGTAGTCTGCTTGTTCAAGTATTTCTACTGGCAAGGAGCTaGCATGCAGCCCGGAGTCAG +
Preference number: 4 (lower is better)
Translates to: KVFLFLRFHTGSLLVQVFLLARS*HAARSQ
Trigger: CTGACTCCGGGCTGCATGTCAGCTCCTTGCCAGTAG...AAATACTTGAACAAGCAGACTACCTGTATGAAAGCGGAGAAACAGAAAAACTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000523370.5
CDS-3UTR GCA 90 bp ATTTTAAAAAGCCATCCAGCAGAATGCCACATCCCTAGAAAGACCCACTTCCTGATCCTCCTCTGTGTGTaGTGGATAGTCCTTGGCTTT +
Preference number: 4 (lower is better)
Translates to: ILKSHPAECHIPRKTHFLILLCV*WIVLGF
Trigger: AAAGCCAAGGACTATCCAGCACACACAGAGGAGGAT...CAGGAAGTGGGTCTTTCTAGGGATGTGGCATTCTGCTGGATGGCTTTTTAAAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000406452.8
ENST00000519639.5
ENST00000523911.5
CDS-3UTR GCA 90 bp ATCTCATACCATTTTGCATTGCTGGTATCCAGGATGCAAAATAATCTCTTTGCCCCGAGATTGTGCCACTaGACACCAGCCTGGGAAACA +
Preference number: 4 (lower is better)
Translates to: ISYHFALLVSRMQNNLFAPRLCH*TPAWET
Trigger: TGTTTCCCAGGCTGGTGTGCAGTGGCACAATCTCGG...GGCAAAGAGATTATTTTGCATCCTGGATACCAGCAATGCAAAATGGTATGAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000406452.8
CDS-3UTR GCA 90 bp CCCATTTTAAAAAGCCATCCAGCAGAATGCCACATCCCTAGAAAGACCCACTTCGGGAAACTGAAAGCCTaGCATTGTTGTTGCCGTTTA +
Preference number: 4 (lower is better)
Translates to: PILKSHPAECHIPRKTHFGKLKA*HCCCRL
Trigger: TAAACGGCAACAACAATGGCAGGCTTTCAGTTTCCC...GAAGTGGGTCTTTCTAGGGATGTGGCATTCTGCTGGATGGCTTTTTAAAATGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000406452.8
CDS-3UTR GCA 90 bp AAGTTTTTCTGTTTCTCCGCTTTCATACAGGTAGTCTGCTTGTTCAAGTATTTCCCAGGAGGCAGTGGTTaGAGTGAGCTGAGATCGCAC +
Preference number: 4 (lower is better)
Translates to: KFFCFSAFIQVVCLFKYFPGGSG*SELRSH
Trigger: GTGCGATCTCAGCTCACTGCAACCACTGCCTCCTGG...GAAATACTTGAACAAGCAGACTACCTGTATGAAAGCGGAGAAACAGAAAAACTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000522804.5
ENST00000523370.5
CDS-3UTR CCA 90 bp TTAAAAAGCCATCCAGCAGAATGCCACATCCCTAGAAAGACCCACTTCCTGGCCTCTTTTGAAAGTTCCTaGGTTTCCCATTACCTCGAA +
Preference number: 4 (lower is better)
Translates to: LKSHPAECHIPRKTHFLASFESS*VSHYLE
Trigger: TTCGAGGTAATGGGAAACCCAGGAACTTTCAAAAGA...GGCCAGGAAGTGGGTCTTTCTAGGGATGTGGCATTCTGCTGGATGGCTTTTTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000406452.8
CDS-3UTR CCA 90 bp CCCATTTTAAAAAGCCATCCAGCAGAATGCCACATCCCTAGAAAGACCCACTTCGTGCTGGATAGTCCTTaGCTTTCATTAGCCAGAAAG +
Preference number: 4 (lower is better)
Translates to: PILKSHPAECHIPRKTHFVLDSP*LSLARK
Trigger: CTTTCTGGCTAATGAAAGCCAAGGACTATCCAGCAC...GAAGTGGGTCTTTCTAGGGATGTGGCATTCTGCTGGATGGCTTTTTAAAATGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000406452.8
ENST00000519639.5
ENST00000523911.5
CDS-3UTR CCA 90 bp TGTTTCTCCGCTTTCATACAGGTAGTCTGCTTGTTCAAGTATTTCTTCAACTGGGAGACTCTTTGGCTGTaGCATGAACCACAGCAGCCT +
Preference number: 4 (lower is better)
Translates to: CFSAFIQVVCLFKYFFNWETLWL*HEPQQP
Trigger: AGGCTGCTGTGGTTCATGCCACAGCCAAAGAGTCTC...CCAGTTGAAGAAATACTTGAACAAGCAGACTACCTGTATGAAAGCGGAGAAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522804.5
ENST00000523370.5
CDS-3UTR TCA 90 bp CAACTGATAAAGTTTTTCTGTTTCTCCGCTTTCATACAGGTAGTCTGCTTGTTCGAGGTTCTGCTAAGCTaGGCTACATCACGTGATGCC +
Preference number: 4 (lower is better)
Translates to: QLIKFFCFSAFIQVVCLFEVLLS*ATSRDA
Trigger: GGCATCACGTGATGTAGCTCAGCTTAGCAGAACCTC...GAACAAGCAGACTACCTGTATGAAAGCGGAGAAACAGAAAAACTTTATCAGTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000522804.5
ENST00000523370.5
ENST00000524172.5
CDS-3UTR TCA 90 bp AAAGTTTTTCTGTTTCTCCGCTTTCATACAGGTAGTCTGCTTGTTCAAGTATTTAGGCAGTGGTTGCAGTaGGCTGAGATCGCACCTCCA +
Preference number: 4 (lower is better)
Translates to: KVFLFLRFHTGSLLVQVFRQWLQ*AEIAPP
Trigger: TGGAGGTGCGATCTCAGCTCACTGCAACCACTGCCT...AAATACTTGAACAAGCAGACTACCTGTATGAAAGCGGAGAAACAGAAAAACTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000522804.5
ENST00000523370.5
CDS-3UTR GCA 90 bp TTAAAAAGCCATCCAGCAGAATGCCACATCCCTAGAAAGACCCACTTCCTGGCCAGGGTTCAGTTCAATTaGTTTCTCAAAATGCTCCTT +
Preference number: 4 (lower is better)
Translates to: LKSHPAECHIPRKTHFLARVQFN*FLKMLL
Trigger: AAGGAGCATTTTGAGAAAGCAATTGAACTGAACCCT...GGCCAGGAAGTGGGTCTTTCTAGGGATGTGGCATTCTGCTGGATGGCTTTTTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000406452.8
ENST00000519639.5
ENST00000523911.5
CDS-3UTR CCA 90 bp ATTTTAAAAAGCCATCCAGCAGAATGCCACATCCCTAGAAAGACCCACTTCCTGGTGCTGGATAGTCCTTaGCTTTCATTAGCCAGAAAG +
Preference number: 4 (lower is better)
Translates to: ILKSHPAECHIPRKTHFLVLDSP*LSLARK
Trigger: CTTTCTGGCTAATGAAAGCCAAGGACTATCCAGCAC...CAGGAAGTGGGTCTTTCTAGGGATGTGGCATTCTGCTGGATGGCTTTTTAAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000406452.8
ENST00000519639.5
ENST00000523911.5
CDS-3UTR CCA 90 bp GGGTTAGCAACTGATAAAGTTTTTCTGTTTCTCCGCTTTCATACAGGTAGTCTGTTTTCAGTAAGCGACTaGCCTCCAGAATGGCCTCGA +
Preference number: 4 (lower is better)
Translates to: GLATDKVFLFLRFHTGSLFSVSD*PPEWPR
Trigger: TCGAGGCCATTCTGGAGGCCAGTCGCTTACTGAAAA...CAGACTACCTGTATGAAAGCGGAGAAACAGAAAAACTTTATCAGTTGCTAACCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000523370.5
CDS-3UTR CCA 90 bp TTCTGTTTCTCCGCTTTCATACAGGTAGTCTGCTTGTTCAAGTATTTCTTCAACCACAGCGAGACTCTTTaGCTGTGGCATGAACCACAG +
Preference number: 4 (lower is better)
Translates to: FCFSAFIQVVCLFKYFFNHSETL*LWHEPQ
Trigger: CTGTGGTTCATGCCACAGCCAAAGAGTCTCGCTGTG...GTTGAAGAAATACTTGAACAAGCAGACTACCTGTATGAAAGCGGAGAAACAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522804.5
ENST00000523370.5
CDS-3UTR TCA 90 bp ATTTGCAATTTTAGCCTTGATGCCTTCATAATCTCCAACATCACTAAGGCAGATGAGGTTCTGCTAAGCTaGGCTACATCACGTGATGCC +
Preference number: 4 (lower is better)
Translates to: ICNFSLDAFIISNITKADEVLLS*ATSRDA
Trigger: GGCATCACGTGATGTAGCTCAGCTTAGCAGAACCTC...ATCTGCCTTAGTGATGTTGGAGATTATGAAGGCATCAAGGCTAAAATTGCAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000522804.5
ENST00000524172.5
CDS-3UTR TCA 90 bp CCCATTTTAAAAAGCCATCCAGCAGAATGCCACATCCCTAGAAAGACCCACTTCACCCATAAGGTGAATTaGAGTAGCATCTTTAGGGTT +
Preference number: 4 (lower is better)
Translates to: PILKSHPAECHIPRKTHFTHKVN*SSIFRV
Trigger: AACCCTAAAGATGCTACTTCAATTCACCTTATGGGT...GAAGTGGGTCTTTCTAGGGATGTGGCATTCTGCTGGATGGCTTTTTAAAATGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000406452.8
ENST00000519639.5
ENST00000523911.5
CDS-3UTR TCA 90 bp GGTTATGTGATAGAGGGAAACTGGCCTTCAAAAAGGACTGCGTATACCATAAAATTACGATGCACTAGGTaGGGCTACACAGAACCTTTG +
Preference number: 4 (lower is better)
Translates to: GYVIEGNWPSKRTAYTIKLRCTR*GYTEPL
Trigger: CAAAGGTTCTGTGTAGCCTCACCTAGTGCATCGTAA...TTTTATGGTATACGCAGTCCTTTTTGAAGGCCAGTTTCCCTCTATCACATAACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000517710.5
CDS-3UTR GCA 90 bp CCCATTTTAAAAAGCCATCCAGCAGAATGCCACATCCCTAGAAAGACCCACTTCATCACTAAGGCAGATTaGATACCACTTATGAGATGC +
Preference number: 4 (lower is better)
Translates to: PILKSHPAECHIPRKTHFITKAD*IPLMRC
Trigger: GCATCTCATAAGTGGTATGCAATCTGCCTTAGTGAT...GAAGTGGGTCTTTCTAGGGATGTGGCATTCTGCTGGATGGCTTTTTAAAATGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000406452.8
ENST00000519639.5
ENST00000523911.5
CDS-3UTR GCA 90 bp ACAGGTAGTCTGCTTGTTCAAGTATTTCTTCAACTGGGCATCATGGCACATGCCATCACTAAGGCAGATTaGATACCACTTATGAGATGC +
Preference number: 4 (lower is better)
Translates to: TGSLLVQVFLQLGIMAHAITKAD*IPLMRC
Trigger: GCATCTCATAAGTGGTATGCAATCTGCCTTAGTGAT...GGCATGTGCCATGATGCCCAGTTGAAGAAATACTTGAACAAGCAGACTACCTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522804.5
CDS-3UTR GCA 90 bp GGTTATGTGATAGAGGGAAACTGGCCTTCAAAAAGGACTGCGTATACCATAAAAATCCTCCTCTGTGTGTaGTGGATAGTCCTTGGCTTT +
Preference number: 4 (lower is better)
Translates to: GYVIEGNWPSKRTAYTIKILLCV*WIVLGF
Trigger: AAAGCCAAGGACTATCCAGCACACACAGAGGAGGAT...TTTTATGGTATACGCAGTCCTTTTTGAAGGCCAGTTTCCCTCTATCACATAACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000517710.5
CDS-3UTR CCA 90 bp ACAGGTAGTCTGCTTGTTCAAGTATTTCTTCAACTGGGCATCATGGCACATGCCTCTTTTGAAAGTTCCTaGGTTTCCCATTACCTCGAA +
Preference number: 4 (lower is better)
Translates to: TGSLLVQVFLQLGIMAHASFESS*VSHYLE
Trigger: TTCGAGGTAATGGGAAACCCAGGAACTTTCAAAAGA...GGCATGTGCCATGATGCCCAGTTGAAGAAATACTTGAACAAGCAGACTACCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522804.5
CDS-3UTR CCA 90 bp ATCTCATACCATTTTGCATTGCTGGTATCCAGGATGCAAAATAATCTCTTTGCCCTTCAACTTTGGCTGTaGCATGAACCACAGCAGCCT +
Preference number: 4 (lower is better)
Translates to: ISYHFALLVSRMQNNLFALQLWL*HEPQQP
Trigger: AGGCTGCTGTGGTTCATGCCACAGCCAAAGTTGAAG...GGCAAAGAGATTATTTTGCATCCTGGATACCAGCAATGCAAAATGGTATGAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406452.8
ENST00000519966.5
CDS-3UTR CCA 90 bp CCCATTTTAAAAAGCCATCCAGCAGAATGCCACATCCCTAGAAAGACCCACTTCTCTTTGCCTGAGCCATaGAGATTTATTTCTACCACT +
Preference number: 4 (lower is better)
Translates to: PILKSHPAECHIPRKTHFSLPEP*RFISTT
Trigger: AGTGGTAGAAATAAATCTCCATGGCTCAGGCAAAGA...GAAGTGGGTCTTTCTAGGGATGTGGCATTCTGCTGGATGGCTTTTTAAAATGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000406452.8
CDS-3UTR CCA 90 bp GAGGGAAACTGGCCTTCAAAAAGGACTGCGTATACCATAAAAGAGTTAAGTATTGACCAATGTGACACGTaGGGAATCAGGCTCCTGTTT +
Preference number: 4 (lower is better)
Translates to: EGNWPSKRTAYTIKELSIDQCDT*GIRLLF
Trigger: AAACAGGAGCCTGATTCCCCACGTGTCACATTGGTC...AATACTTAACTCTTTTATGGTATACGCAGTCCTTTTTGAAGGCCAGTTTCCCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000517710.5
CDS-3UTR CCA 90 bp TTAAAAAGCCATCCAGCAGAATGCCACATCCCTAGAAAGACCCACTTCCTGGCCTCTTTTGAAAGTTCCTaGGTTTCCCATTACCTTAAA +
Preference number: 4 (lower is better)
Translates to: LKSHPAECHIPRKTHFLASFESS*VSHYLK
Trigger: TTTAAGGTAATGGGAAACCCAGGAACTTTCAAAAGA...GGCCAGGAAGTGGGTCTTTCTAGGGATGTGGCATTCTGCTGGATGGCTTTTTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000523911.5
CDS-3UTR TCA 90 bp GAAATCTCATACCATTTTGCATTGCTGGTATCCAGGATGCAAAATAATCTCTTTGAGGTTCTGCTAAGCTaGGCTACATCACGTGATGCC +
Preference number: 4 (lower is better)
Translates to: EISYHFALLVSRMQNNLFEVLLS*ATSRDA
Trigger: GGCATCACGTGATGTAGCTCAGCTTAGCAGAACCTC...AAAGAGATTATTTTGCATCCTGGATACCAGCAATGCAAAATGGTATGAGATTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406452.8
ENST00000519966.5
CDS-3UTR TCA 90 bp ATTTTAAAAAGCCATCCAGCAGAATGCCACATCCCTAGAAAGACCCACTTCCTGACCCATAAGGTGAATTaGAGTAGCATCTTTAGGGTT +
Preference number: 4 (lower is better)
Translates to: ILKSHPAECHIPRKTHFLTHKVN*SSIFRV
Trigger: AACCCTAAAGATGCTACTTCAATTCACCTTATGGGT...CAGGAAGTGGGTCTTTCTAGGGATGTGGCATTCTGCTGGATGGCTTTTTAAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000406452.8
ENST00000519639.5
ENST00000523911.5
CDS-3UTR TCA 90 bp ATTTTAAAAAGCCATCCAGCAGAATGCCACATCCCTAGAAAGACCCACTTCCTGTTAGCAATTCTTCTTTaGTACCAAGGCATTTCGGCA +
Preference number: 4 (lower is better)
Translates to: ILKSHPAECHIPRKTHFLLAILL*YQGISA
Trigger: TGCCGAAATGCCTTGGTATCAAAGAAGAATTGCTAA...CAGGAAGTGGGTCTTTCTAGGGATGTGGCATTCTGCTGGATGGCTTTTTAAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000406452.8
ENST00000519639.5
ENST00000523911.5
CDS-3UTR TCA 90 bp CCCATTTTAAAAAGCCATCCAGCAGAATGCCACATCCCTAGAAAGACCCACTTCAGAATCAATCCAATTTaGAAATCCATCCCCCTGTAT +
Preference number: 4 (lower is better)
Translates to: PILKSHPAECHIPRKTHFRINPI*KSIPLY
Trigger: ATACAGGGGGATGGATTTTCAAATTGGATTGATTCT...GAAGTGGGTCTTTCTAGGGATGTGGCATTCTGCTGGATGGCTTTTTAAAATGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000406452.8
CDS-3UTR TCA 90 bp GGTTATGTGATAGAGGGAAACTGGCCTTCAAAAAGGACTGCGTATACCATAAAAGCTACACAGAACCTTTaGTATACATGTACGTGGGGA +
Preference number: 4 (lower is better)
Translates to: GYVIEGNWPSKRTAYTIKATQNL*YTCTWG
Trigger: TCCCCACGTACATGTATATCAAAGGTTCTGTGTAGC...TTTTATGGTATACGCAGTCCTTTTTGAAGGCCAGTTTCCCTCTATCACATAACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000517710.5
CDS-3UTR GCA 90 bp ATTTTAAAAAGCCATCCAGCAGAATGCCACATCCCTAGAAAGACCCACTTCCTGATCACTAAGGCAGATTaGATACCACTTATGAGATGC +
Preference number: 4 (lower is better)
Translates to: ILKSHPAECHIPRKTHFLITKAD*IPLMRC
Trigger: GCATCTCATAAGTGGTATGCAATCTGCCTTAGTGAT...CAGGAAGTGGGTCTTTCTAGGGATGTGGCATTCTGCTGGATGGCTTTTTAAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000406452.8
ENST00000519639.5
ENST00000523911.5
CDS-3UTR GCA 90 bp ATCTCATACCATTTTGCATTGCTGGTATCCAGGATGCAAAATAATCTCTTTGCCATCCTCCTCTGTGTGTaGTGGATAGTCCTTGGCTTT +
Preference number: 4 (lower is better)
Translates to: ISYHFALLVSRMQNNLFAILLCV*WIVLGF
Trigger: AAAGCCAAGGACTATCCAGCACACACAGAGGAGGAT...GGCAAAGAGATTATTTTGCATCCTGGATACCAGCAATGCAAAATGGTATGAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406452.8
ENST00000519966.5
CDS-3UTR GCA 90 bp CCAAAATTTGGAAAAACATCCCAAATCCAAGATGCTTCTACTAGTCCCAAGTATTCCTGGCCCTTCAGCTaGTTCTGTTTCTCTTCACCT +
Preference number: 4 (lower is better)
Translates to: PKFGKTSQIQDASTSPKYSWPFS*FCFSSP
Trigger: AGGTGAAGAGAAACAGAAGCAGCTGAAGGGCCAGGA...ATACTTGGGACTAGTAGAAGCATCTTGGATTTGGGATGTTTTTCCAAATTTTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000406452.8
CDS-3UTR CCA 90 bp GAAATCTCATACCATTTTGCATTGCTGGTATCCAGGATGCAAAATAATCTCTTTGAAAGACCCACTTCCTaGCCCTTCAGCTGCTTCTGT +
Preference number: 4 (lower is better)
Translates to: EISYHFALLVSRMQNNLFERPTS*PFSCFC
Trigger: ACAGAAGCAGCTGAAGGGCCAGGAAGTGGGTCTTTC...AAAGAGATTATTTTGCATCCTGGATACCAGCAATGCAAAATGGTATGAGATTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406452.8
3UTR CAA 72 bp TTTTTCTGTTTCTCCGCTTTCATACAGGTAGTCTGCTaGTTCAAGTATTTCTTCAACTGGGCATCATGGCAC +
Preference number: 4 (lower is better)
Translates to: FFCFSAFIQVVC*FKYFFNWASWH
Trigger: GTGCCATGATGCCCAGTTGAAGAAATACTTGAACAAGCAGACTACCTGTATGAAAGCGGAGAAACAGAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000522804.5
ENST00000523370.5
CDS-3UTR GCA 90 bp GGTAGTCTGCTTGTTCAAGTATTTCTTCAACTGGGCATCATGGCACATGCCTGTTTCATACAGGTAGTCTaGTTGTTCAAGTATTTCTTC +
Preference number: 4 (lower is better)
Translates to: GSLLVQVFLQLGIMAHACFIQVV*LFKYFF
Trigger: GAAGAAATACTTGAACAAGCAGACTACCTGTATGAA...ACAGGCATGTGCCATGATGCCCAGTTGAAGAAATACTTGAACAAGCAGACTACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522804.5
ENST00000523370.5
CDS-3UTR GCA 90 bp CCCATTTTAAAAAGCCATCCAGCAGAATGCCACATCCCTAGAAAGACCCACTTCTTCATACAGGTAGTCTaGTTGTTCAAGTATTTCTTC +
Preference number: 4 (lower is better)
Translates to: PILKSHPAECHIPRKTHFFIQVV*LFKYFF
Trigger: GAAGAAATACTTGAACAAGCAGACTACCTGTATGAA...GAAGTGGGTCTTTCTAGGGATGTGGCATTCTGCTGGATGGCTTTTTAAAATGGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000406452.8
ENST00000523911.5
CDS-3UTR GCA 90 bp ATTTTAAAAAGCCATCCAGCAGAATGCCACATCCCTAGAAAGACCCACTTCCTGAGGGTTCAGTTCAATTaGTTTCTCAAAATGCTCCTT +
Preference number: 4 (lower is better)
Translates to: ILKSHPAECHIPRKTHFLRVQFN*FLKMLL
Trigger: AAGGAGCATTTTGAGAAAGCAATTGAACTGAACCCT...CAGGAAGTGGGTCTTTCTAGGGATGTGGCATTCTGCTGGATGGCTTTTTAAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000406452.8
ENST00000519639.5
ENST00000523911.5
CDS-3UTR CCA 90 bp AAAAATCCACCTACACACACAGTCTGTCTTTATCTAAGTGGATTCAAGATGCTCGTGCTGGATAGTCCTTaGCTTTCATTAGCCAGAAAG +
Preference number: 4 (lower is better)
Translates to: KNPPTHTVCLYLSGFKMLVLDSP*LSLARK
Trigger: CTTTCTGGCTAATGAAAGCCAAGGACTATCCAGCAC...GAGCATCTTGAATCCACTTAGATAAAGACAGACTGTGTGTGTAGGTGGATTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000406452.8
CDS-3UTR CCA 90 bp GAATTCATAGTAAAGACGAAAGAAAGGCAGAGATCTGCTTGGTTGAATAGACTCGTGCTGGATAGTCCTTaGCTTTCATTAGCCAGAAAG +
Preference number: 4 (lower is better)
Translates to: EFIVKTKERQRSAWLNRLVLDSP*LSLARK
Trigger: CTTTCTGGCTAATGAAAGCCAAGGACTATCCAGCAC...GAGTCTATTCAACCAAGCAGATCTCTGCCTTTCTTTCGTCTTTACTATGAATTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517710.5
CDS-3UTR CCA 90 bp AAGTTTTTCTGTTTCTCCGCTTTCATACAGGTAGTCTGCTTGTTCAAGTATTTCAATATTGCCGCACTTTaGCTGTGGCATGAACCACAG +
Preference number: 4 (lower is better)
Translates to: KFFCFSAFIQVVCLFKYFNIAAL*LWHEPQ
Trigger: CTGTGGTTCATGCCACAGCCAAAGTGCGGCAATATT...GAAATACTTGAACAAGCAGACTACCTGTATGAAAGCGGAGAAACAGAAAAACTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524172.5
CDS-3UTR CCA 90 bp GAATTCATAGTAAAGACGAAAGAAAGGCAGAGATCTGCTTGGTTGAATAGACTCTCGTTTTCAGGGTGCTaGTCTCCCTCAAGTAAGAAA +
Preference number: 4 (lower is better)
Translates to: EFIVKTKERQRSAWLNRLSFSGC*SPSSKK
Trigger: TTTCTTACTTGAGGGAGACCAGCACCCTGAAAACGA...GAGTCTATTCAACCAAGCAGATCTCTGCCTTTCTTTCGTCTTTACTATGAATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517710.5
CDS-3UTR TCA 90 bp GGTTATGTGATAGAGGGAAACTGGCCTTCAAAAAGGACTGCGTATACCATAAAAAGAGATCTGCTTGGTTaGATAGACTCCTTTTCCAAA +
Preference number: 4 (lower is better)
Translates to: GYVIEGNWPSKRTAYTIKRDLLG*IDSFSK
Trigger: TTTGGAAAAGGAGTCTATTCAACCAAGCAGATCTCT...TTTTATGGTATACGCAGTCCTTTTTGAAGGCCAGTTTCCCTCTATCACATAACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000517710.5
CDS-3UTR CCA 90 bp GAGGGAAACTGGCCTTCAAAAAGGACTGCGTATACCATAAAAGAGTTAAGTATTTTTGCTGTAGAAGTTTaGATCCACTTGTTCTGCCCT +
Preference number: 4 (lower is better)
Translates to: EGNWPSKRTAYTIKELSIFAVEV*IHLFCP
Trigger: AGGGCAGAACAAGTGGATCCAAACTTCTACAGCAAA...AATACTTAACTCTTTTATGGTATACGCAGTCCTTTTTGAAGGCCAGTTTCCCTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000517710.5
CDS-3UTR CCA 90 bp TGCTTTCTGATGGTTCAAGGTATGCAAACTTGGTCTCAATGCACAAAATTATTAACATTTAAAGTAAACTaGCCAGGTGCGGTGGCTCAC +
Preference number: 4 (lower is better)
Translates to: CFLMVQGMQTWSQCTKLLTFKVN*PGAVAH
Trigger: GTGAGCCACCGCACCTGGCCAGTTTACTTTAAATGT...TAATAATTTTGTGCATTGAGACCAAGTTTGCATACCTTGAACCATCAGAAAGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406452.8
CDS-3UTR CCA 90 bp TGTGATCAATCCTTAGAAATCTCATACCATTTTGCATTGCTGGTATCCAGGATGTACAGCATCATTAAGTaGGAAACTGAAAGCCTGCCA +
Preference number: 4 (lower is better)
Translates to: CDQSLEISYHFALLVSRMYSIIK*ETESLP
Trigger: TGGCAGGCTTTCAGTTTCCCACTTAATGATGCTGTA...CATCCTGGATACCAGCAATGCAAAATGGTATGAGATTTCTAAGGATTGATCACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406452.8
CDS-3UTR TCA 90 bp ATCTCATACCATTTTGCATTGCTGGTATCCAGGATGCAAAATAATCTCTTTGCCACCCATAAGGTGAATTaGAGTAGCATCTTTAGGGTT +
Preference number: 4 (lower is better)
Translates to: ISYHFALLVSRMQNNLFATHKVN*SSIFRV
Trigger: AACCCTAAAGATGCTACTTCAATTCACCTTATGGGT...GGCAAAGAGATTATTTTGCATCCTGGATACCAGCAATGCAAAATGGTATGAGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406452.8
ENST00000519966.5
CDS-3UTR TCA 90 bp GAATTCATAGTAAAGACGAAAGAAAGGCAGAGATCTGCTTGGTTGAATAGACTCTTAGCAATTCTTCTTTaGTACCAAGGCATTTCGGCA +
Preference number: 4 (lower is better)
Translates to: EFIVKTKERQRSAWLNRLLAILL*YQGISA
Trigger: TGCCGAAATGCCTTGGTATCAAAGAAGAATTGCTAA...GAGTCTATTCAACCAAGCAGATCTCTGCCTTTCTTTCGTCTTTACTATGAATTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517710.5
CDS-3UTR TCA 90 bp TGCTTTCTGATGGTTCAAGGTATGCAAACTTGGTCTCAATGCACAAAATTATTATTGCCGTTTAACAGCTaGTACAGGTTTCTGGTGATG +
Preference number: 4 (lower is better)
Translates to: CFLMVQGMQTWSQCTKLLLPFNS*YRFLVM
Trigger: CATCACCAGAAACCTGTATCAGCTGTTAAACGGCAA...TAATAATTTTGTGCATTGAGACCAAGTTTGCATACCTTGAACCATCAGAAAGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406452.8
CDS-3UTR GCA 90 bp TTTCTCCGCTTTCATACAGGTAGTCTGCTTGTTCAAGTATTTCTTCAACTGGGCTTCATACAGGTAGTCTaGTTGTTCAAGTATTTCTTC +
Preference number: 4 (lower is better)
Translates to: FLRFHTGSLLVQVFLQLGFIQVV*LFKYFF
Trigger: GAAGAAATACTTGAACAAGCAGACTACCTGTATGAA...GCCCAGTTGAAGAAATACTTGAACAAGCAGACTACCTGTATGAAAGCGGAGAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522804.5
ENST00000523370.5
CDS-3UTR GCA 90 bp CAACTGATAAAGTTTTTCTGTTTCTCCGCTTTCATACAGGTAGTCTGCTTGTTCATCACTAAGGCAGATTaGATACCACTTATGAGATGC +
Preference number: 4 (lower is better)
Translates to: QLIKFFCFSAFIQVVCLFITKAD*IPLMRC
Trigger: GCATCTCATAAGTGGTATGCAATCTGCCTTAGTGAT...GAACAAGCAGACTACCTGTATGAAAGCGGAGAAACAGAAAAACTTTATCAGTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000522804.5
ENST00000524172.5
CDS-3UTR GCA 90 bp TGTGATCAATCCTTAGAAATCTCATACCATTTTGCATTGCTGGTATCCAGGATGTGCTGGTATCCAGGATaGAAAATAATCTCTTTGCCT +
Preference number: 4 (lower is better)
Translates to: CDQSLEISYHFALLVSRMCWYPG*KIISLP
Trigger: AGGCAAAGAGATTATTTTGCATCCTGGATACCAGCA...CATCCTGGATACCAGCAATGCAAAATGGTATGAGATTTCTAAGGATTGATCACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406452.8
ENST00000519966.5
CDS-3UTR GCA 90 bp ATCTCATACCATTTTGCATTGCTGGTATCCAGGATGCAAAATAATCTCTTTGCCTGCTGGTATCCAGGATaGAAAATAATCTCTTTGCCT +
Preference number: 4 (lower is better)
Translates to: ISYHFALLVSRMQNNLFACWYPG*KIISLP
Trigger: AGGCAAAGAGATTATTTTGCATCCTGGATACCAGCA...GGCAAAGAGATTATTTTGCATCCTGGATACCAGCAATGCAAAATGGTATGAGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000406452.8
ENST00000519966.5
CDS-3UTR GCA 90 bp ATCTCATACCATTTTGCATTGCTGGTATCCAGGATGCAAAATAATCTCTTTGCCCATACCATTTTGCATTaGTGGTATCCAGGATGCAAA +
Preference number: 4 (lower is better)
Translates to: ISYHFALLVSRMQNNLFAHTILH*WYPGCK
Trigger: TTTGCATCCTGGATACCAGCAATGCAAAATGGTATG...GGCAAAGAGATTATTTTGCATCCTGGATACCAGCAATGCAAAATGGTATGAGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000406452.8
ENST00000519966.5
CDS-3UTR GCA 90 bp TGTGATCAATCCTTAGAAATCTCATACCATTTTGCATTGCTGGTATCCAGGATGCATACCATTTTGCATTaGTGGTATCCAGGATGCAAA +
Preference number: 4 (lower is better)
Translates to: CDQSLEISYHFALLVSRMHTILH*WYPGCK
Trigger: TTTGCATCCTGGATACCAGCAATGCAAAATGGTATG...CATCCTGGATACCAGCAATGCAAAATGGTATGAGATTTCTAAGGATTGATCACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406452.8
ENST00000519966.5
CDS-3UTR GCA 90 bp AATGTATGTGACAGGTTATGTGATAGAGGGAAACTGGCCTTCAAAAAGGACTGCTACAAATGGTACCACTaGTGTATAAATTTTGCCATG +
Preference number: 4 (lower is better)
Translates to: NVCDRLCDRGKLAFKKDCYKWYH*CINFAM
Trigger: CATGGCAAAATTTATACAGCAGTGGTACCATTTGTA...GCAGTCCTTTTTGAAGGCCAGTTTCCCTCTATCACATAACCTGTCACATACATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000517710.5
CDS-3UTR CCA 90 bp AAATCTCATACCATTTTGCATTGCTGGTATCCAGGATGCAAAATAATCTCTTTGGTGCTGGATAGTCCTTaGCTTTCATTAGCCAGAAAG +
Preference number: 4 (lower is better)
Translates to: KSHTILHCWYPGCKIISLVLDSP*LSLARK
Trigger: CTTTCTGGCTAATGAAAGCCAAGGACTATCCAGCAC...CAAAGAGATTATTTTGCATCCTGGATACCAGCAATGCAAAATGGTATGAGATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406452.8
ENST00000519966.5
CDS-3UTR CCA 90 bp GCTTGGTTGAATAGACTCCTTTTCCAAATCCTTATTATGAACACTCTGGTAATTTCCAGCAGTCAGCTCTaGAATCCACACAAGAACAAT +
Preference number: 4 (lower is better)
Translates to: AWLNRLLFQILIMNTLVISSSQL*NPHKNN
Trigger: ATTGTTCTTGTGTGGATTCCAGAGCTGACTGCTGGA...AATTACCAGAGTGTTCATAATAAGGATTTGGAAAAGGAGTCTATTCAACCAAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517710.5
CDS-3UTR CCA 90 bp TTCTGTTTCTCCGCTTTCATACAGGTAGTCTGCTTGTTCAAGTATTTCTTCAACTCTTTTGAAAGTTCCTaGGTTTCCCATTACCACACT +
Preference number: 4 (lower is better)
Translates to: FCFSAFIQVVCLFKYFFNSFESS*VSHYHT
Trigger: AGTGTGGTAATGGGAAACCCAGGAACTTTCAAAAGA...GTTGAAGAAATACTTGAACAAGCAGACTACCTGTATGAAAGCGGAGAAACAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524172.5
CDS-3UTR TCA 90 bp ATAATCTCCAACATCACTAAGGCAGATTGCATACCACTTATGAGATGCAAAACTACCCATAAGGTGAATTaGAGTAGCATCTTTAGGGTT +
Preference number: 4 (lower is better)
Translates to: IISNITKADCIPLMRCKTTHKVN*SSIFRV
Trigger: AACCCTAAAGATGCTACTTCAATTCACCTTATGGGT...AGTTTTGCATCTCATAAGTGGTATGCAATCTGCCTTAGTGATGTTGGAGATTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524172.5
CDS-3UTR TCA 90 bp GAAATCTCATACCATTTTGCATTGCTGGTATCCAGGATGCAAAATAATCTCTTTAAACTTGTAAGCAACTaGGCAGCTTCTGTCTGTATC +
Preference number: 4 (lower is better)
Translates to: EISYHFALLVSRMQNNLFKLVSN*AASVCI
Trigger: GATACAGACAGAAGCTGCTCAGTTGCTTACAAGTTT...AAAGAGATTATTTTGCATCCTGGATACCAGCAATGCAAAATGGTATGAGATTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406452.8
ENST00000519966.5
CDS-3UTR TCA 90 bp TGCTTTCTGATGGTTCAAGGTATGCAAACTTGGTCTCAATGCACAAAATTATTACACAAATTACCCACATaGGTGGCTGAGATAATGACA +
Preference number: 4 (lower is better)
Translates to: CFLMVQGMQTWSQCTKLLHKLPT*VAEIMT
Trigger: TGTCATTATCTCAGCCACTCATGTGGGTAATTTGTG...TAATAATTTTGTGCATTGAGACCAAGTTTGCATACCTTGAACCATCAGAAAGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406452.8
CDS-3UTR GCA 90 bp ATCTCATACCATTTTGCATTGCTGGTATCCAGGATGCAAAATAATCTCTTTGCCAATCTCATACCATTTTaGATTGCTGGTATCCAGGAT +
Preference number: 4 (lower is better)
Translates to: ISYHFALLVSRMQNNLFANLIPF*IAGIQD
Trigger: ATCCTGGATACCAGCAATGCAAAATGGTATGAGATT...GGCAAAGAGATTATTTTGCATCCTGGATACCAGCAATGCAAAATGGTATGAGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000406452.8
ENST00000519966.5
CDS-3UTR GCA 90 bp AAAAATCCACCTACACACACAGTCTGTCTTTATCTAAGTGGATTCAAGATGCTCCCATCCTTGTTCCTGTaGGAGTTATGTCATATTTTT +
Preference number: 4 (lower is better)
Translates to: KNPPTHTVCLYLSGFKMLPSLFL*ELCHIF
Trigger: AAAAATATGACATAACTCGCACAGGAACAAGGATGG...GAGCATCTTGAATCCACTTAGATAAAGACAGACTGTGTGTGTAGGTGGATTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000406452.8
CDS-3UTR GCA 90 bp GAATTCATAGTAAAGACGAAAGAAAGGCAGAGATCTGCTTGGTTGAATAGACTCGCCTTCAAAAAGGACTaGGTATACCATAAAAGAGTT +
Preference number: 4 (lower is better)
Translates to: EFIVKTKERQRSAWLNRLAFKKD*VYHKRV
Trigger: AACTCTTTTATGGTATACGCAGTCCTTTTTGAAGGC...GAGTCTATTCAACCAAGCAGATCTCTGCCTTTCTTTCGTCTTTACTATGAATTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000517710.5
CDS-3UTR CCA 90 bp AAATCTCATACCATTTTGCATTGCTGGTATCCAGGATGCAAAATAATCTCTTTGGTATTTCTTCAACTTTaGCTGTGGCATGAACCACAG +
Preference number: 4 (lower is better)
Translates to: KSHTILHCWYPGCKIISLVFLQL*LWHEPQ
Trigger: CTGTGGTTCATGCCACAGCCAAAGTTGAAGAAATAC...CAAAGAGATTATTTTGCATCCTGGATACCAGCAATGCAAAATGGTATGAGATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406452.8
ENST00000519966.5
CDS-3UTR CCA 90 bp TGTGATCAATCCTTAGAAATCTCATACCATTTTGCATTGCTGGTATCCAGGATGACCATTTTGCATTGCTaGTATCCAGGATGCAAAATA +
Preference number: 4 (lower is better)
Translates to: CDQSLEISYHFALLVSRMTILHC*YPGCKI
Trigger: TATTTTGCATCCTGGATACCAGCAATGCAAAATGGT...CATCCTGGATACCAGCAATGCAAAATGGTATGAGATTTCTAAGGATTGATCACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000406452.8
ENST00000519966.5
CDS-3UTR CCA 90 bp GCTTGGTTGAATAGACTCCTTTTCCAAATCCTTATTATGAACACTCTGGTAATTAGGCAGAGATCTGCTTaGTTGAATAGACTCCTTTTC +
Preference number: 4 (lower is better)
Translates to: AWLNRLLFQILIMNTLVIRQRSA*LNRLLF
Trigger: GAAAAGGAGTCTATTCAACCAAGCAGATCTCTGCCT...AATTACCAGAGTGTTCATAATAAGGATTTGGAAAAGGAGTCTATTCAACCAAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517710.5
CDS-3UTR CCA 90 bp TGTTTCTCCGCTTTCATACAGGTAGTCTGCTTGTTCAAGTATTTCTTCAACTGGTCTTTTGAAAGTTCCTaGGTTTCCCATTACCTTAAA +
Preference number: 4 (lower is better)
Translates to: CFSAFIQVVCLFKYFFNWSFESS*VSHYLK
Trigger: TTTAAGGTAATGGGAAACCCAGGAACTTTCAAAAGA...CCAGTTGAAGAAATACTTGAACAAGCAGACTACCTGTATGAAAGCGGAGAAACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523370.5
CDS-3UTR TCA 90 bp GAAATCTCATACCATTTTGCATTGCTGGTATCCAGGATGCAAAATAATCTCTTTTTAGCAATTCTTCTTTaGTACCAAGGCATTTCGGCA +
Preference number: 4 (lower is better)
Translates to: EISYHFALLVSRMQNNLFLAILL*YQGISA
Trigger: TGCCGAAATGCCTTGGTATCAAAGAAGAATTGCTAA...AAAGAGATTATTTTGCATCCTGGATACCAGCAATGCAAAATGGTATGAGATTTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000406452.8
ENST00000519966.5
CDS-3UTR GCA 90 bp ATCTCATACCATTTTGCATTGCTGGTATCCAGGATGCAAAATAATCTCTTTGCCTTCATACAGGTAGTCTaGTTGTTCAAGTATTTCTTC +
Preference number: 4 (lower is better)
Translates to: ISYHFALLVSRMQNNLFAFIQVV*LFKYFF
Trigger: GAAGAAATACTTGAACAAGCAGACTACCTGTATGAA...GGCAAAGAGATTATTTTGCATCCTGGATACCAGCAATGCAAAATGGTATGAGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406452.8
ENST00000519966.5
CDS-3UTR GCA 90 bp TGTGATCAATCCTTAGAAATCTCATACCATTTTGCATTGCTGGTATCCAGGATGTTCATACAGGTAGTCTaGTTGTTCAAGTATTTCTTC +
Preference number: 4 (lower is better)
Translates to: CDQSLEISYHFALLVSRMFIQVV*LFKYFF
Trigger: GAAGAAATACTTGAACAAGCAGACTACCTGTATGAA...CATCCTGGATACCAGCAATGCAAAATGGTATGAGATTTCTAAGGATTGATCACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406452.8
ENST00000519966.5
CDS-3UTR GCA 90 bp TTCTGTTTCTCCGCTTTCATACAGGTAGTCTGCTTGTTCAAGTATTTCTTCAACTTCATACAGGTAGTCTaGTTGTTCAAGTATTTCTTC +
Preference number: 4 (lower is better)
Translates to: FCFSAFIQVVCLFKYFFNFIQVV*LFKYFF
Trigger: GAAGAAATACTTGAACAAGCAGACTACCTGTATGAA...GTTGAAGAAATACTTGAACAAGCAGACTACCTGTATGAAAGCGGAGAAACAGAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522804.5
ENST00000523370.5
ENST00000524172.5
CDS-3UTR GCA 90 bp GCTTTCATACAGGTAGTCTGCTTGTTCAAGTATTTCTTCAACTTCATTTCAGGAAGGGTTCAGTTCAATTaGTTTCTCAAAATGCTCCTT +
Preference number: 4 (lower is better)
Translates to: AFIQVVCLFKYFFNFISGRVQFN*FLKMLL
Trigger: AAGGAGCATTTTGAGAAAGCAATTGAACTGAACCCT...TCCTGAAATGAAGTTGAAGAAATACTTGAACAAGCAGACTACCTGTATGAAAGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524172.5
CDS-3UTR GCA 90 bp ATCTCATACCATTTTGCATTGCTGGTATCCAGGATGCAAAATAATCTCTTTGCCAGGGTTCAGTTCAATTaGTTTCTTATGAGATGCAAA +
Preference number: 4 (lower is better)
Translates to: ISYHFALLVSRMQNNLFARVQFN*FLMRCK
Trigger: TTTGCATCTCATAAGAAAGCAATTGAACTGAACCCT...GGCAAAGAGATTATTTTGCATCCTGGATACCAGCAATGCAAAATGGTATGAGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519966.5
CDS-3UTR CCA 90 bp GAAATCTCATACCATTTTGCATTGCTGGTATCCAGGATGCAAAATAATCTCTTTTCTTTTGAAAGTTCCTaGGTTTCCCATTACCTCGAA +
Preference number: 4 (lower is better)
Translates to: EISYHFALLVSRMQNNLFSFESS*VSHYLE
Trigger: TTCGAGGTAATGGGAAACCCAGGAACTTTCAAAAGA...AAAGAGATTATTTTGCATCCTGGATACCAGCAATGCAAAATGGTATGAGATTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000406452.8
ENST00000519966.5
CDS-3UTR CCA 90 bp AAATCTCATACCATTTTGCATTGCTGGTATCCAGGATGCAAAATAATCTCTTTGTCTTTGCCTGAGCCATaGAGATTTATTTCTACCACT +
Preference number: 4 (lower is better)
Translates to: KSHTILHCWYPGCKIISLSLPEP*RFISTT
Trigger: AGTGGTAGAAATAAATCTCCATGGCTCAGGCAAAGA...CAAAGAGATTATTTTGCATCCTGGATACCAGCAATGCAAAATGGTATGAGATTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406452.8
ENST00000519966.5
CDS-3UTR CCA 90 bp GCTTGGTTGAATAGACTCCTTTTCCAAATCCTTATTATGAACACTCTGGTAATTAATGTAAGGGATTCCTaGGGTTTGTTCTCAGTAATG +
Preference number: 4 (lower is better)
Translates to: AWLNRLLFQILIMNTLVINVRDS*GLFSVM
Trigger: CATTACTGAGAACAAACCCCAGGAATCCCTTACATT...AATTACCAGAGTGTTCATAATAAGGATTTGGAAAAGGAGTCTATTCAACCAAGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517710.5
CDS-3UTR TCA 90 bp GAAATCTCATACCATTTTGCATTGCTGGTATCCAGGATGCAAAATAATCTCTTTAATAATCTCTTTGCCTaGGCCATGGAGATTTATTTC +
Preference number: 4 (lower is better)
Translates to: EISYHFALLVSRMQNNLFNNLFA*AMEIYF
Trigger: GAAATAAATCTCCATGGCTCAGGCAAAGAGATTATT...AAAGAGATTATTTTGCATCCTGGATACCAGCAATGCAAAATGGTATGAGATTTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406452.8
ENST00000519966.5
CDS-3UTR GCA 90 bp GAAATCTCATACCATTTTGCATTGCTGGTATCCAGGATGCAAAATAATCTCTTTAATCTCATACCATTTTaGATTGCTGGTATCCAGGAT +
Preference number: 4 (lower is better)
Translates to: EISYHFALLVSRMQNNLFNLIPF*IAGIQD
Trigger: ATCCTGGATACCAGCAATGCAAAATGGTATGAGATT...AAAGAGATTATTTTGCATCCTGGATACCAGCAATGCAAAATGGTATGAGATTTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000406452.8
ENST00000519966.5
CDS-3UTR CCA 90 bp AAATCTCATACCATTTTGCATTGCTGGTATCCAGGATGCAAAATAATCTCTTTGACCATTTTGCATTGCTaGTATCCAGGATGCAAAATA +
Preference number: 4 (lower is better)
Translates to: KSHTILHCWYPGCKIISLTILHC*YPGCKI
Trigger: TATTTTGCATCCTGGATACCAGCAATGCAAAATGGT...CAAAGAGATTATTTTGCATCCTGGATACCAGCAATGCAAAATGGTATGAGATTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000406452.8
ENST00000519966.5
CDS-3UTR GCA 90 bp TGCTTTCTGATGGTTCAAGGTATGCAAACTTGGTCTCAATGCACAAAATTATTACTACAAATATTTCTTTaGTTGATCTCCCATCCCAAT +
Preference number: 4 (lower is better)
Translates to: CFLMVQGMQTWSQCTKLLLQIFL*LISHPN
Trigger: ATTGGGATGGGAGATCAAGCAAAGAAATATTTGTAG...TAATAATTTTGTGCATTGAGACCAAGTTTGCATACCTTGAACCATCAGAAAGCA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406452.8
CDS GCA 90 bp CGGAAAGGCAGAAGGCGCCACAGTCGAGCAGCCAGCGCCATGACCTaGAACTTGCGGGCTGACCCTGCACTACTTCAGGCAGCTACGGAG +
Preference number: 5 (lower is better)
Translates to: RKGRRRHSRAASAMT*NLRADPALLQAATE
Trigger: CTCCGTAGCTGCCTGAAGTAGTGCAGGGTCAGCCCGCAAGTTGCAGGTCATGGCGCTGGCTGCTCGACTGTGGCGCCTTCTGCCTTTCCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406452.8
ENST00000430676.6
ENST00000519966.5
ENST00000522804.5
CDS TCA 90 bp CACGTCGGAAAGGCAGAAGGCGCCACAGTCGAGCAGCCAGCGCCATaGCCTGCAACTTGCGGGCTGACCCTGCACTACTTCAGGCAGCTA +
Preference number: 5 (lower is better)
Translates to: HVGKAEGATVEQPAP*PATCGLTLHYFRQL
Trigger: TAGCTGCCTGAAGTAGTGCAGGGTCAGCCCGCAAGTTGCAGGTCATGGCGCTGGCTGCTCGACTGTGGCGCCTTCTGCCTTTCCGACGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406452.8
ENST00000430676.6
ENST00000519966.5
ENST00000522804.5
CDS CCA 90 bp ACAATCAGGTGGGGGCTGCACGGGAAGGAGAATGTAAGGGATTCCTaGGGTTTGTTCTCAGTAATGGGTCTCACCCTTAGTGGGGAAACG +
Preference number: 5 (lower is better)
Translates to: TIRWGLHGKENVRDS*GLFSVMGLTLSGET
Trigger: CGTTTCCCCACTAAGGGTGAGACCCATTACTGAGAACAAACCCCAGGAATCCCTTACATTCTCCTTCCCGTGCAGCCCCCACCTGATTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000517710.5
ENST00000519247.5
CDS CCA 90 bp CTCAATCCAGCAGTCAGCTCTGGAATCCACACAAGAACAATCAGGTaGGGGCTGCACGGGAAGGAGAATGTAAGGGATTCCTGGGGTTTG +
Preference number: 5 (lower is better)
Translates to: LNPAVSSGIHTRTIR*GLHGKENVRDSWGL
Trigger: CAAACCCCAGGAATCCCTTACATTCTCCTTCCCGTGCAGCCCCCACCTGATTGTTCTTGTGTGGATTCCAGAGCTGACTGCTGGATTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000517710.5
ENST00000519247.5
CDS-3UTR CAA 90 bp GCTACATCACGTGATGCCCGTGCCAAACGCCACAGTAACTCTGCATCTTCACTTCCTTGGGTTCTAATATaGCCGCACTTTGGCTGTGGC +
Preference number: 5 (lower is better)
Translates to: ATSRDARAKRHSNSASSLPWVLI*PHFGCG
Trigger: GCCACAGCCAAAGTGCGGCAATATTAGAACCCAAGG...AAGTGAAGATGCAGAGTTACTGTGGCGTTTGGCACGGGCATCACGTGATGTAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524172.5
CDS-3UTR CAA 90 bp TTTCTCCGCTTTCATACAGGTAGTCTGCTTGTTCAAGTATTTCTTCAACTGGGCGCCATGACCTGCAACTaGCGGGCTGACCCTGCACTA +
Preference number: 5 (lower is better)
Translates to: FLRFHTGSLLVQVFLQLGAMTCN*RADPAL
Trigger: TAGTGCAGGGTCAGCCCGCAAGTTGCAGGTCATGGC...GCCCAGTTGAAGAAATACTTGAACAAGCAGACTACCTGTATGAAAGCGGAGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522804.5
CDS-3UTR CAA 90 bp CCAGCAGAATGCCACATCCCTAGAAAGACCCACTTCCTGGCCCTTCAGCTGCTTTCATACCATTTTGCATaGCTGGTATCCAGGATGCAA +
Preference number: 5 (lower is better)
Translates to: PAECHIPRKTHFLALQLLSYHFA*LVSRMQ
Trigger: TTGCATCCTGGATACCAGCAATGCAAAATGGTATGA...AAGCAGCTGAAGGGCCAGGAAGTGGGTCTTTCTAGGGATGTGGCATTCTGCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406452.8
CDS-3UTR CAA 90 bp TTAAAAAGCCATCCAGCAGAATGCCACATCCCTAGAAAGACCCACTTCCTGGCCGAGATAATGACACCTTaGCTTTCTGATGGTTCAAGG +
Preference number: 5 (lower is better)
Translates to: LKSHPAECHIPRKTHFLAEIMTP*LSDGSR
Trigger: CCTTGAACCATCAGAAAGCAAAGGTGTCATTATCTC...GGCCAGGAAGTGGGTCTTTCTAGGGATGTGGCATTCTGCTGGATGGCTTTTTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000406452.8
CDS-3UTR CAA 90 bp AAATCTCATACCATTTTGCATTGCTGGTATCCAGGATGCAAAATAATCTCTTTGGCCATGACCTGCAACTaGCGGGCTGACCCTGCACTA +
Preference number: 5 (lower is better)
Translates to: KSHTILHCWYPGCKIISLAMTCN*RADPAL
Trigger: TAGTGCAGGGTCAGCCCGCAAGTTGCAGGTCATGGC...CAAAGAGATTATTTTGCATCCTGGATACCAGCAATGCAAAATGGTATGAGATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406452.8
ENST00000519966.5
CDS-3UTR CAA 90 bp TTAAAAAGCCATCCAGCAGAATGCCACATCCCTAGAAAGACCCACTTCCTGGCCTTTCTAGTGCTCTTTTaGCATACTCTAGGGCTTCAT +
Preference number: 5 (lower is better)
Translates to: LKSHPAECHIPRKTHFLAFLVLF*HTLGLH
Trigger: ATGAAGCCCTAGAGTATGCAAAAAGAGCACTAGAAA...GGCCAGGAAGTGGGTCTTTCTAGGGATGTGGCATTCTGCTGGATGGCTTTTTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000406452.8
ENST00000523911.5
CDS-3UTR CAA 90 bp CCCATTTTAAAAAGCCATCCAGCAGAATGCCACATCCCTAGAAAGACCCACTTCTTTTGCTGTAGAAGTTaGGATCCACTTGTTCTGCCC +
Preference number: 5 (lower is better)
Translates to: PILKSHPAECHIPRKTHFFCCRS*DPLVLP
Trigger: GGGCAGAACAAGTGGATCCAAACTTCTACAGCAAAA...GAAGTGGGTCTTTCTAGGGATGTGGCATTCTGCTGGATGGCTTTTTAAAATGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000406452.8
ENST00000519639.5
CDS-3UTR CAA 90 bp AATGTATGTGACAGGTTATGTGATAGAGGGAAACTGGCCTTCAAAAAGGACTGCAGGGATTCCTGGGGTTaGTTCTCAGTAATGGGTCTC +
Preference number: 5 (lower is better)
Translates to: NVCDRLCDRGKLAFKKDCRDSWG*FSVMGL
Trigger: GAGACCCATTACTGAGAACAAACCCCAGGAATCCCT...GCAGTCCTTTTTGAAGGCCAGTTTCCCTCTATCACATAACCTGTCACATACATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000517710.5
CDS-3UTR CAA 90 bp TTAAAAAGCCATCCAGCAGAATGCCACATCCCTAGAAAGACCCACTTCCTGGCCATACAGGTAGTCTGCTaGTTCAAGTATTTCTTCAAC +
Preference number: 5 (lower is better)
Translates to: LKSHPAECHIPRKTHFLAIQVVC*FKYFFN
Trigger: GTTGAAGAAATACTTGAACAAGCAGACTACCTGTAT...GGCCAGGAAGTGGGTCTTTCTAGGGATGTGGCATTCTGCTGGATGGCTTTTTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000406452.8
ENST00000523911.5
CDS-3UTR CAA 90 bp ATTTTAAAAAGCCATCCAGCAGAATGCCACATCCCTAGAAAGACCCACTTCCTGGAAGTTTGGATCCACTaGTTCTGCCCTGTGAAAGTA +
Preference number: 5 (lower is better)
Translates to: ILKSHPAECHIPRKTHFLEVWIH*FCPVKV
Trigger: TACTTTCACAGGGCAGAACAAGTGGATCCAAACTTC...CAGGAAGTGGGTCTTTCTAGGGATGTGGCATTCTGCTGGATGGCTTTTTAAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000406452.8
ENST00000519639.5
CDS-3UTR CAA 90 bp ATTTTAAAAAGCCATCCAGCAGAATGCCACATCCCTAGAAAGACCCACTTCCTGTTTTGCTGTAGAAGTTaGGATCCACTTGTTCTGCCC +
Preference number: 5 (lower is better)
Translates to: ILKSHPAECHIPRKTHFLFCCRS*DPLVLP
Trigger: GGGCAGAACAAGTGGATCCAAACTTCTACAGCAAAA...CAGGAAGTGGGTCTTTCTAGGGATGTGGCATTCTGCTGGATGGCTTTTTAAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000406452.8
ENST00000519639.5
CDS-3UTR CAA 90 bp TTAAAAAGCCATCCAGCAGAATGCCACATCCCTAGAAAGACCCACTTCCTGGCCTCTACAAATATTTCTTaGCTTGATCTCCCATCCCAA +
Preference number: 5 (lower is better)
Translates to: LKSHPAECHIPRKTHFLASTNIS*LDLPSQ
Trigger: TTGGGATGGGAGATCAAGCAAAGAAATATTTGTAGA...GGCCAGGAAGTGGGTCTTTCTAGGGATGTGGCATTCTGCTGGATGGCTTTTTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000406452.8
CDS-3UTR CAA 90 bp CCCATTTTAAAAAGCCATCCAGCAGAATGCCACATCCCTAGAAAGACCCACTTCTTTAGCAATTCTTCTTaGATACCAAGGCATTTCGGC +
Preference number: 5 (lower is better)
Translates to: PILKSHPAECHIPRKTHFFSNSS*IPRHFG
Trigger: GCCGAAATGCCTTGGTATCAAAGAAGAATTGCTAAA...GAAGTGGGTCTTTCTAGGGATGTGGCATTCTGCTGGATGGCTTTTTAAAATGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000406452.8
ENST00000519639.5
ENST00000523911.5
CDS-3UTR CAA 90 bp ATTTTAAAAAGCCATCCAGCAGAATGCCACATCCCTAGAAAGACCCACTTCCTGAAACTTAAAAAGATTTaGCAGTGGTGGCACTCCAGC +
Preference number: 5 (lower is better)
Translates to: ILKSHPAECHIPRKTHFLKLKKI*QWWHSS
Trigger: GCTGGAGTGCCACCACTGCAAAATCTTTTTAAGTTT...CAGGAAGTGGGTCTTTCTAGGGATGTGGCATTCTGCTGGATGGCTTTTTAAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000406452.8
CDS-3UTR CAA 90 bp TTTCTGTTTCTCCGCTTTCATACAGGTAGTCTGCTTGTTCAAGTATTTCTTCAACAGCCTCAAGCGCTGTaGTATCTGTCATCGCCTACA +
Preference number: 5 (lower is better)
Translates to: FLFLRFHTGSLLVQVFLQQPQAL*YLSSPT
Trigger: TGTAGGCGATGACAGATACAACAGCGCTTGAGGCTG...TTGAAGAAATACTTGAACAAGCAGACTACCTGTATGAAAGCGGAGAAACAGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524172.5
CDS-3UTR CAA 90 bp CTCCGCTTTCATACAGGTAGTCTGCTTGTTCAAGTATTTCTTCAACTGGGCATCTTTCTAGTGCTCTTTTaGCATACTCTAGGGCTTCAT +
Preference number: 5 (lower is better)
Translates to: LRFHTGSLLVQVFLQLGIFLVLF*HTLGLH
Trigger: ATGAAGCCCTAGAGTATGCAAAAAGAGCACTAGAAA...GATGCCCAGTTGAAGAAATACTTGAACAAGCAGACTACCTGTATGAAAGCGGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522804.5
CDS-3UTR CAA 90 bp ATTTTAAAAAGCCATCCAGCAGAATGCCACATCCCTAGAAAGACCCACTTCCTGTTTAGCAATTCTTCTTaGATACCAAGGCATTTCGGC +
Preference number: 5 (lower is better)
Translates to: ILKSHPAECHIPRKTHFLFSNSS*IPRHFG
Trigger: GCCGAAATGCCTTGGTATCAAAGAAGAATTGCTAAA...CAGGAAGTGGGTCTTTCTAGGGATGTGGCATTCTGCTGGATGGCTTTTTAAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000406452.8
ENST00000519639.5
ENST00000523911.5
CDS-3UTR CAA 90 bp ATTTTAAAAAGCCATCCAGCAGAATGCCACATCCCTAGAAAGACCCACTTCCTGAAATCTCATACCATTTaGCATTGCTGGTATCCAGGA +
Preference number: 5 (lower is better)
Translates to: ILKSHPAECHIPRKTHFLKSHTI*HCWYPG
Trigger: TCCTGGATACCAGCAATGCAAAATGGTATGAGATTT...CAGGAAGTGGGTCTTTCTAGGGATGTGGCATTCTGCTGGATGGCTTTTTAAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000406452.8
CDS-3UTR CAA 90 bp AATGTATGTGACAGGTTATGTGATAGAGGGAAACTGGCCTTCAAAAAGGACTGCCAGAGATCTGCTTGGTaGAATAGACTCCTTTTCCAA +
Preference number: 5 (lower is better)
Translates to: NVCDRLCDRGKLAFKKDCQRSAW*NRLLFQ
Trigger: TTGGAAAAGGAGTCTATTCAACCAAGCAGATCTCTG...GCAGTCCTTTTTGAAGGCCAGTTTCCCTCTATCACATAACCTGTCACATACATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000517710.5
CDS-3UTR CAA 90 bp GAGGGAAACTGGCCTTCAAAAAGGACTGCGTATACCATAAAAGAGTTAAGTATTGGCTACACAGAACCTTaGATATACATGTACGTGGGG +
Preference number: 5 (lower is better)
Translates to: EGNWPSKRTAYTIKELSIGYTEP*IYMYVG
Trigger: CCCCACGTACATGTATATCAAAGGTTCTGTGTAGCC...AATACTTAACTCTTTTATGGTATACGCAGTCCTTTTTGAAGGCCAGTTTCCCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000517710.5
CDS-3UTR CAA 90 bp GAGGGAAACTGGCCTTCAAAAAGGACTGCGTATACCATAAAAGAGTTAAGTATTGAAGTTTGGATCCACTaGTTCTGCCCTGTGAAAGTA +
Preference number: 5 (lower is better)
Translates to: EGNWPSKRTAYTIKELSIEVWIH*FCPVKV
Trigger: TACTTTCACAGGGCAGAACAAGTGGATCCAAACTTC...AATACTTAACTCTTTTATGGTATACGCAGTCCTTTTTGAAGGCCAGTTTCCCTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000517710.5
CDS-3UTR CAA 90 bp GAATTCATAGTAAAGACGAAAGAAAGGCAGAGATCTGCTTGGTTGAATAGACTCTTTTGCTGTAGAAGTTaGGATCCACTTGTTCTGCCC +
Preference number: 5 (lower is better)
Translates to: EFIVKTKERQRSAWLNRLFCCRS*DPLVLP
Trigger: GGGCAGAACAAGTGGATCCAAACTTCTACAGCAAAA...GAGTCTATTCAACCAAGCAGATCTCTGCCTTTCTTTCGTCTTTACTATGAATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517710.5
CDS GCA 90 bp CAACTGATAAAGTTTTTCTGTTTCTCCGCTTTCATACAGGTAGTCTaGTTGTTCAAGTATTTCTTCAACTTTGGCTGTGGCATGAACCAC +
Preference number: 5 (lower is better)
Translates to: QLIKFFCFSAFIQVV*LFKYFFNFGCGMNH
Trigger: GTGGTTCATGCCACAGCCAAAGTTGAAGAAATACTTGAACAAGCAGACTACCTGTATGAAAGCGGAGAAACAGAAAAACTTTATCAGTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000406452.8
ENST00000430676.6
ENST00000519789.5
ENST00000519966.5
ENST00000521045.1
ENST00000523911.5
CDS-3UTR CAA 90 bp CATACAGGTAGTCTGCTTGTTCAAGTATTTCTTCAACTGGGCATCATGGCACATATACAGGTAGTCTGCTaGTTCAAGTATTTCTTCAAC +
Preference number: 5 (lower is better)
Translates to: HTGSLLVQVFLQLGIMAHIQVVC*FKYFFN
Trigger: GTTGAAGAAATACTTGAACAAGCAGACTACCTGTAT...ATGTGCCATGATGCCCAGTTGAAGAAATACTTGAACAAGCAGACTACCTGTATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522804.5
ENST00000523370.5
CDS-3UTR CAA 90 bp AAATCTCATACCATTTTGCATTGCTGGTATCCAGGATGCAAAATAATCTCTTTGACTGAAAGCCTGCCATaGTTGTTGCCGTTTAACAGC +
Preference number: 5 (lower is better)
Translates to: KSHTILHCWYPGCKIISLTESLP*LLPFNS
Trigger: GCTGTTAAACGGCAACAACAATGGCAGGCTTTCAGT...CAAAGAGATTATTTTGCATCCTGGATACCAGCAATGCAAAATGGTATGAGATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406452.8
CDS-3UTR CAA 90 bp TTTCTCCGCTTTCATACAGGTAGTCTGCTTGTTCAAGTATTTCTTCAACTGGGCACCTCAAAATGCTCCTaGATGATATATGCATTTGCA +
Preference number: 5 (lower is better)
Translates to: FLRFHTGSLLVQVFLQLGTSKCS*MIYAFA
Trigger: TGCAAATGCATATATCATCAAGGAGCATTTTGAGGT...GCCCAGTTGAAGAAATACTTGAACAAGCAGACTACCTGTATGAAAGCGGAGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522804.5
CDS-3UTR CAA 90 bp AAAAATCCACCTACACACACAGTCTGTCTTTATCTAAGTGGATTCAAGATGCTCTTTCTAGTGCTCTTTTaGCATACTCTAGGGCTTCAT +
Preference number: 5 (lower is better)
Translates to: KNPPTHTVCLYLSGFKMLFLVLF*HTLGLH
Trigger: ATGAAGCCCTAGAGTATGCAAAAAGAGCACTAGAAA...GAGCATCTTGAATCCACTTAGATAAAGACAGACTGTGTGTGTAGGTGGATTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000406452.8
CDS-3UTR CAA 90 bp TGTGATCAATCCTTAGAAATCTCATACCATTTTGCATTGCTGGTATCCAGGATGTTTCTAGTGCTCTTTTaGCATACTCTAGGGCTTCAT +
Preference number: 5 (lower is better)
Translates to: CDQSLEISYHFALLVSRMFLVLF*HTLGLH
Trigger: ATGAAGCCCTAGAGTATGCAAAAAGAGCACTAGAAA...CATCCTGGATACCAGCAATGCAAAATGGTATGAGATTTCTAAGGATTGATCACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406452.8
ENST00000519966.5
CDS-3UTR CAA 90 bp GAATTCATAGTAAAGACGAAAGAAAGGCAGAGATCTGCTTGGTTGAATAGACTCTTTAGCAATTCTTCTTaGATACCAAGGCATTTCGGC +
Preference number: 5 (lower is better)
Translates to: EFIVKTKERQRSAWLNRLFSNSS*IPRHFG
Trigger: GCCGAAATGCCTTGGTATCAAAGAAGAATTGCTAAA...GAGTCTATTCAACCAAGCAGATCTCTGCCTTTCTTTCGTCTTTACTATGAATTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517710.5
CDS-3UTR CAA 90 bp ATCTCATACCATTTTGCATTGCTGGTATCCAGGATGCAAAATAATCTCTTTGCCTTTAGCAATTCTTCTTaGATACCAAGGCATTTCGGC +
Preference number: 5 (lower is better)
Translates to: ISYHFALLVSRMQNNLFAFSNSS*IPRHFG
Trigger: GCCGAAATGCCTTGGTATCAAAGAAGAATTGCTAAA...GGCAAAGAGATTATTTTGCATCCTGGATACCAGCAATGCAAAATGGTATGAGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406452.8
ENST00000519966.5
CDS-3UTR CAA 90 bp TGCTTTCTGATGGTTCAAGGTATGCAAACTTGGTCTCAATGCACAAAATTATTAGAAGTTTGGATCCACTaGTTCTGCCCTGTGAAAGTA +
Preference number: 5 (lower is better)
Translates to: CFLMVQGMQTWSQCTKLLEVWIH*FCPVKV
Trigger: TACTTTCACAGGGCAGAACAAGTGGATCCAAACTTC...TAATAATTTTGTGCATTGAGACCAAGTTTGCATACCTTGAACCATCAGAAAGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406452.8
CDS-3UTR CAA 90 bp AAAAATCCACCTACACACACAGTCTGTCTTTATCTAAGTGGATTCAAGATGCTCCTCCAAGATATCTTATaGTGTGTATGCAGGTATTCC +
Preference number: 5 (lower is better)
Translates to: KNPPTHTVCLYLSGFKMLLQDIL*CVCRYS
Trigger: GGAATACCTGCATACACACAATAAGATATCTTGGAG...GAGCATCTTGAATCCACTTAGATAAAGACAGACTGTGTGTGTAGGTGGATTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000406452.8
CDS-3UTR CAA 90 bp GGTTATGTGATAGAGGGAAACTGGCCTTCAAAAAGGACTGCGTATACCATAAAATATGATTTAGCAGATTaGACTGAAGAAGGCAGCTTT +
Preference number: 5 (lower is better)
Translates to: GYVIEGNWPSKRTAYTIKYDLAD*TEEGSF
Trigger: AAAGCTGCCTTCTTCAGTCAAATCTGCTAAATCATA...TTTTATGGTATACGCAGTCCTTTTTGAAGGCCAGTTTCCCTCTATCACATAACC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000517710.5
CDS GCA 90 bp TGTTGTGTAGTTTCAAGTATGTCTTTCCTAAAAGAAGTAAGTTTTTaGTGTAGAAGTTTGGATCCACTTGTTCTGCCCTGTGAAAGTAGC +
Preference number: 5 (lower is better)
Translates to: CCVVSSMSFLKEVSF*CRSLDPLVLPCESS
Trigger: GCTACTTTCACAGGGCAGAACAAGTGGATCCAAACTTCTACAGCAAAAACTTACTTCTTTTAGGAAAGACATACTTGAAACTACACAACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000406452.8
ENST00000430676.6
ENST00000517710.5
ENST00000517821.1
ENST00000519639.5
ENST00000522942.1
CDS-3UTR CAA 90 bp ATCTCATACCATTTTGCATTGCTGGTATCCAGGATGCAAAATAATCTCTTTGCCATACAGGTAGTCTGCTaGTTCAAGTATTTCTTCAAC +
Preference number: 5 (lower is better)
Translates to: ISYHFALLVSRMQNNLFAIQVVC*FKYFFN
Trigger: GTTGAAGAAATACTTGAACAAGCAGACTACCTGTAT...GGCAAAGAGATTATTTTGCATCCTGGATACCAGCAATGCAAAATGGTATGAGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406452.8
ENST00000519966.5
CDS-3UTR CAA 90 bp GCTTTCATACAGGTAGTCTGCTTGTTCAAGTATTTCTTCAACTTCATTTCAGGATTTCTAGTGCTCTTTTaGCATACTCTAGGGCTTCAT +
Preference number: 5 (lower is better)
Translates to: AFIQVVCLFKYFFNFISGFLVLF*HTLGLH
Trigger: ATGAAGCCCTAGAGTATGCAAAAAGAGCACTAGAAA...TCCTGAAATGAAGTTGAAGAAATACTTGAACAAGCAGACTACCTGTATGAAAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524172.5
CDS-3UTR CAA 90 bp AAATCTCATACCATTTTGCATTGCTGGTATCCAGGATGCAAAATAATCTCTTTGTCATACCATTTTGCATaGCTGGTATCCAGGATGCAA +
Preference number: 5 (lower is better)
Translates to: KSHTILHCWYPGCKIISLSYHFA*LVSRMQ
Trigger: TTGCATCCTGGATACCAGCAATGCAAAATGGTATGA...CAAAGAGATTATTTTGCATCCTGGATACCAGCAATGCAAAATGGTATGAGATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000406452.8
ENST00000519966.5
CDS-3UTR CAA 90 bp TGTGATCAATCCTTAGAAATCTCATACCATTTTGCATTGCTGGTATCCAGGATGAATTTGTGTTTAAACTaGGGTCCCATCTCCAAGATA +
Preference number: 5 (lower is better)
Translates to: CDQSLEISYHFALLVSRMNLCLN*GPISKI
Trigger: TATCTTGGAGATGGGACCCAAGTTTAAACACAAATT...CATCCTGGATACCAGCAATGCAAAATGGTATGAGATTTCTAAGGATTGATCACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406452.8
CDS-3UTR CAA 90 bp ATCTCATACCATTTTGCATTGCTGGTATCCAGGATGCAAAATAATCTCTTTGCCATGAAACAAGTGAATTaGTGTTTAAACTTGGGTCCC +
Preference number: 5 (lower is better)
Translates to: ISYHFALLVSRMQNNLFAMKQVN*CLNLGP
Trigger: GGGACCCAAGTTTAAACACAAATTCACTTGTTTCAT...GGCAAAGAGATTATTTTGCATCCTGGATACCAGCAATGCAAAATGGTATGAGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406452.8
CDS-3UTR CAA 90 bp GAAATCTCATACCATTTTGCATTGCTGGTATCCAGGATGCAAAATAATCTCTTTAAATCTCATACCATTTaGCATTGCTGGTATCCAGGA +
Preference number: 5 (lower is better)
Translates to: EISYHFALLVSRMQNNLFKSHTI*HCWYPG
Trigger: TCCTGGATACCAGCAATGCAAAATGGTATGAGATTT...AAAGAGATTATTTTGCATCCTGGATACCAGCAATGCAAAATGGTATGAGATTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406452.8
ENST00000519966.5
CDS-3UTR CAA 90 bp TGCTTTCTGATGGTTCAAGGTATGCAAACTTGGTCTCAATGCACAAAATTATTACAAATATTTCTTTGCTaGATCTCCCATCCCAATGTG +
Preference number: 5 (lower is better)
Translates to: CFLMVQGMQTWSQCTKLLQIFLC*ISHPNV
Trigger: CACATTGGGATGGGAGATCAAGCAAAGAAATATTTG...TAATAATTTTGTGCATTGAGACCAAGTTTGCATACCTTGAACCATCAGAAAGCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406452.8
CDS GCA 72 bp ATTACCTCGAAGCCGCGGAATCGACAGGGGCCGCAATaGCCGCGGCTGCCCGAAGTCCCCGCAGGGAGACGA +
Preference number: 6 (lower is better)
Translates to: ITSKPRNRQGPQ*PRLPEVPAGRR
Trigger: TCGTCTCCCTGCGGGGACTTCGGGCAGCCGCGGGCATTGCGGCCCCTGTCGATTCCGCGGCTTCGAGGTAAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000406452.8
ENST00000430676.6
ENST00000518772.1
ENST00000519966.5
ENST00000522804.5
CDS CAA 90 bp GGCAGAAGGCGCCACAGTCGAGCAGCCAGCGCCATGACCTGCAACTaGCGGGCTGACCCTGCACTACTTCAGGCAGCTACGGAGGCGGGC +
Preference number: 6 (lower is better)
Translates to: GRRRHSRAASAMTCN*RADPALLQAATEAG
Trigger: GCCCGCCTCCGTAGCTGCCTGAAGTAGTGCAGGGTCAGCCCGCAAGTTGCAGGTCATGGCGCTGGCTGCTCGACTGTGGCGCCTTCTGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406452.8
ENST00000430676.6
ENST00000519966.5
ENST00000522804.5
CDS TCA 72 bp TCGAGCAGCCAGCGCCATGACCTGCAACTTGCGGGCTaGCCCTGCACTACTTCAGGCAGCTACGGAGGCGGG +
Preference number: 6 (lower is better)
Translates to: SSSQRHDLQLAG*PCTTSGSYGGG
Trigger: CCCGCCTCCGTAGCTGCCTGAAGTAGTGCAGGGTCAGCCCGCAAGTTGCAGGTCATGGCGCTGGCTGCTCGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406452.8
ENST00000430676.6
ENST00000519966.5
ENST00000522804.5
CDS TCA 72 bp GAATGGCCTCGAAGCGCCAGCCTACTGGCAAGGAGCTaGCATGCAGCCCGGAGTCAGCTCCCTGCGGATGGG +
Preference number: 6 (lower is better)
Translates to: EWPRSASLLARS*HAARSQLPADG
Trigger: CCCATCCGCAGGGAGCTGACTCCGGGCTGCATGTCAGCTCCTTGCCAGTAGGCTGGCGCTTCGAGGCCATTC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523370.5
CDS CCA 72 bp ACTGGCCTCCAGAATGGCCTCGAAGCGCCAGCCTACTaGCAAGGAGCTGACATGCAGCCCGGAGTCAGCTCC +
Preference number: 6 (lower is better)
Translates to: TGLQNGLEAPAY*QGADMQPGVSS
Trigger: GGAGCTGACTCCGGGCTGCATGTCAGCTCCTTGCCAGTAGGCTGGCGCTTCGAGGCCATTCTGGAGGCCAGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523370.5
CDS CAA 72 bp CGCCACAGTCGAGCAGCCAGCGCCATGACCTGCAACTaGCGGGCTGACCCTGCACTACTTCAGGCAGCTACG +
Preference number: 6 (lower is better)
Translates to: RHSRAASAMTCN*RADPALLQAAT
Trigger: CGTAGCTGCCTGAAGTAGTGCAGGGTCAGCCCGCAAGTTGCAGGTCATGGCGCTGGCTGCTCGACTGTGGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406452.8
ENST00000430676.6
ENST00000519966.5
ENST00000522804.5
CDS TCA 72 bp AAGGCAGAAGGCGCCACAGTCGAGCAGCCAGCGCCATaGCCTGCAACTTGCGGGCTGACCCTGCACTACTTC +
Preference number: 6 (lower is better)
Translates to: KAEGATVEQPAP*PATCGLTLHYF
Trigger: GAAGTAGTGCAGGGTCAGCCCGCAAGTTGCAGGTCATGGCGCTGGCTGCTCGACTGTGGCGCCTTCTGCCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406452.8
ENST00000430676.6
ENST00000519966.5
ENST00000522804.5
CDS GCA 72 bp AGAAGGCGCCACAGTCGAGCAGCCAGCGCCATGACCTaGAACTTGCGGGCTGACCCTGCACTACTTCAGGCA +
Preference number: 6 (lower is better)
Translates to: RRRHSRAASAMT*NLRADPALLQA
Trigger: TGCCTGAAGTAGTGCAGGGTCAGCCCGCAAGTTGCAGGTCATGGCGCTGGCTGCTCGACTGTGGCGCCTTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406452.8
ENST00000430676.6
ENST00000519966.5
ENST00000522804.5
CDS CCA 72 bp AAATGGAAGGGACCTGTCCGGGCGTTCCAGGCACAGTaGCCCCGAGTTCTTTCCTCGGTTCACCACATTCCT +
Preference number: 6 (lower is better)
Translates to: KWKGPVRAFQAQ*PRVLSSVHHIP
Trigger: AGGAATGTGGTGAACCGAGGAAAGAACTCGGGGCCACTGTGCCTGGAACGCCCGGACAGGTCCCTTCCATTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521045.1
CDS CAA 72 bp CCTTCTCTGACAGCCCCAGTTAAGGATAGTGGAGGTTaGCAAAATGGAAGGGACCTGTCCGGGCGTTCCAGG +
Preference number: 6 (lower is better)
Translates to: PSLTAPVKDSGG*QNGRDLSGRSR
Trigger: CCTGGAACGCCCGGACAGGTCCCTTCCATTTTGCAAACCTCCACTATCCTTAACTGGGGCTGTCAGAGAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521045.1
CDS TCA 72 bp GTCTCACCCTTAGTGGGGAAACGTCACGGACCAATGTaGCACGTGGGGAATCAGGCTCCTGTTTATCCTCCT +
Preference number: 6 (lower is better)
Translates to: VSPLVGKRHGPM*HVGNQAPVYPP
Trigger: AGGAGGATAAACAGGAGCCTGATTCCCCACGTGTCACATTGGTCCGTGACGTTTCCCCACTAAGGGTGAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000517710.5
ENST00000519247.5
CDS CAA 90 bp GTTTCAAAACCCAAATACGACAAAGCTGAGAGTAAAAGGCCTCTTTaGAAAGTTCCTGGGTTTCCCATTACCTCGAAGCCGCGGAATCGA +
Preference number: 6 (lower is better)
Translates to: VSKPKYDKAESKRPL*KVPGFPITSKPRNR
Trigger: TCGATTCCGCGGCTTCGAGGTAATGGGAAACCCAGGAACTTTCAAAAGAGGCCTTTTACTCTCAGCTTTGTCGTATTTGGGTTTTGAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000406452.8
ENST00000430676.6
ENST00000518772.1
ENST00000519966.5
ENST00000522804.5
CDS TCA 72 bp TGGTCTCCCTCAAGTAAGAAATTACGATGCACTAGGTaGGGCTACACAGAACCTTTGATATACATGTACGTG +
Preference number: 6 (lower is better)
Translates to: WSPSSKKLRCTR*GYTEPLIYMYV
Trigger: CACGTACATGTATATCAAAGGTTCTGTGTAGCCTCACCTAGTGCATCGTAATTTCTTACTTGAGGGAGACCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517710.5
CDS GCA 72 bp AAGTTTTTCTGTTTCTCCGCTTTCATACAGGTAGTCTaGTTGTTCAAGTATTTCTTCAACTTTGGCTGTGGC +
Preference number: 6 (lower is better)
Translates to: KFFCFSAFIQVV*LFKYFFNFGCG
Trigger: GCCACAGCCAAAGTTGAAGAAATACTTGAACAAGCAGACTACCTGTATGAAAGCGGAGAAACAGAAAAACTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000406452.8
ENST00000430676.6
ENST00000519789.5
ENST00000519966.5
ENST00000521045.1
ENST00000523911.5
CDS CAA 72 bp TTTTTCTGTTTCTCCGCTTTCATACAGGTAGTCTGCTaGTTCAAGTATTTCTTCAACTTTGGCTGTGGCATG +
Preference number: 6 (lower is better)
Translates to: FFCFSAFIQVVC*FKYFFNFGCGM
Trigger: CATGCCACAGCCAAAGTTGAAGAAATACTTGAACAAGCAGACTACCTGTATGAAAGCGGAGAAACAGAAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000406452.8
ENST00000430676.6
ENST00000519789.5
ENST00000519966.5
ENST00000521045.1
ENST00000523911.5
CDS GCA 72 bp GTTTCAAGTATGTCTTTCCTAAAAGAAGTAAGTTTTTaGTGTAGAAGTTTGGATCCACTTGTTCTGCCCTGT +
Preference number: 6 (lower is better)
Translates to: VSSMSFLKEVSF*CRSLDPLVLPC
Trigger: ACAGGGCAGAACAAGTGGATCCAAACTTCTACAGCAAAAACTTACTTCTTTTAGGAAAGACATACTTGAAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000406452.8
ENST00000430676.6
ENST00000517710.5
ENST00000517821.1
ENST00000519639.5
ENST00000522942.1
CDS GCA 72 bp GTTTCAAGTATGTCTTTCCTAAAAGAAGTAAGTTTTTaGTGTAGAAGTTTGGATCCACTGCACATAAGAAAG +
Preference number: 6 (lower is better)
Translates to: VSSMSFLKEVSF*CRSLDPLHIRK
Trigger: CTTTCTTATGTGCAGTGGATCCAAACTTCTACAGCAAAAACTTACTTCTTTTAGGAAAGACATACTTGAAAC
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000517404.1