Pregenerated sensors for RLN2 (Homo sapiens)
Ensembl gene IDs: ENSG00000107014Ensembl transcript IDs: ENST00000416837.1
Found 5 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 72 bp | ACAGGTACATGTTGTTGTAGCTGTGGTAATGCTGGCTaGATCTCAGACAGGGTTAACTTCAGCTCCTGTGGC | + |
|
Preference number: 3 (lower is better) Translates to: TGTCCCSCGNAG*ISDRVNFSSCG Trigger: GCCACAGGAGCTGAAGTTAACCCTGTCTGAGATGCAGCCAGCATTACCACAGCTACAACAACATGTACCTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000416837.1 |
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| CDS-3UTR CCA 90 bp | ACATGTTGTTGTAGCTGTGGTAATGCTGGCTGCATCTCAGACAGGGTTAACTTCAAGGATGGCACAATTTaGAAAGGGCACCAAGGAACT | + |
|
Preference number: 4 (lower is better) Translates to: TCCCSCGNAGCISDRVNFKDGTI*KGHQGT Trigger: AGTTCCTTGGTGCCCTTTCCAAATTGTGCCATCCTT...GAAGTTAACCCTGTCTGAGATGCAGCCAGCATTACCACAGCTACAACAACATGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000416837.1 |
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| CDS-3UTR GCA 90 bp | TTTAATACAGGTACATGTTGTTGTAGCTGTGGTAATGCTGGCTGCATCTCAGACTGTGGTAATGCTGGCTaGATCTCAGACAGGGTTAAC | + |
|
Preference number: 4 (lower is better) Translates to: FNTGTCCCSCGNAGCISDCGNAG*ISDRVN Trigger: GTTAACCCTGTCTGAGATGCAGCCAGCATTACCACA...GTCTGAGATGCAGCCAGCATTACCACAGCTACAACAACATGTACCTGTATTAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000416837.1 |
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| CDS-3UTR GCA 90 bp | TTTAATACAGGTACATGTTGTTGTAGCTGTGGTAATGCTGGCTGCATCTCAGACTTGAATAAAATCACCTaGCACTGGTCTAGGTGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: FNTGTCCCSCGNAGCISDLNKIT*HWSRCL Trigger: CAGACACCTAGACCAGTGGCAGGTGATTTTATTCAA...GTCTGAGATGCAGCCAGCATTACCACAGCTACAACAACATGTACCTGTATTAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000416837.1 |
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| CDS-3UTR CAA 90 bp | TGTTGTAGCTGTGGTAATGCTGGCTGCATCTCAGACAGGGTTAACTTCAGCTCCGAAGGATGGCACAATTaGGAAAGGGCACCAAGGAAC | + |
|
Preference number: 5 (lower is better) Translates to: CCSCGNAGCISDRVNFSSEGWHN*ERAPRN Trigger: GTTCCTTGGTGCCCTTTCCAAATTGTGCCATCCTTC...GGAGCTGAAGTTAACCCTGTCTGAGATGCAGCCAGCATTACCACAGCTACAACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000416837.1 |
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