Pregenerated sensors for RIPPLY3 (Homo sapiens)
Ensembl gene IDs: ENSG00000183145Ensembl transcript IDs: ENST00000329553.3, ENST00000485272.5, ENST00000490393.1
Found 65 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | GAGTTTCTCCACGTTGGTCAGGCTGGTCCTTTTTGTTACTCTTATGGGAATTATGGATGCGTAGTGTCCTaGCTCGGGTGTCCCCAAGAG | + |
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Preference number: 2 (lower is better) Translates to: EFLHVGQAGPFCYSYGNYGCVVS*LGCPQE Trigger: CTCTTGGGGACACCCGAGCCAGGACACTACGCATCC...ATAATTCCCATAAGAGTAACAAAAAGGACCAGCCTGACCAACGTGGAGAAACTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000329553.3 |
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| 3UTR-3UTR GCA 90 bp | GAGTTTCTCCACGTTGGTCAGGCTGGTCCTTTTTGTTACTCTTATGGGAATTATGAAGCCTCTAGCCTCTaGACACTCAGCAGGGATGCG | + |
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Preference number: 2 (lower is better) Translates to: EFLHVGQAGPFCYSYGNYEASSL*TLSRDA Trigger: CGCATCCCTGCTGAGTGTGCAGAGGCTAGAGGCTTC...ATAATTCCCATAAGAGTAACAAAAAGGACCAGCCTGACCAACGTGGAGAAACTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000329553.3 |
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| 3UTR-3UTR TCA 90 bp | ACTCCCTATAAATTCATACACACAGGCCTCCTTATACAGTCATCACATACATTTGTCCCCAAGAGAACGTaGGGGGCAGGTCCCAGAGCA | + |
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Preference number: 2 (lower is better) Translates to: TPYKFIHTGLLIQSSHTFVPKRT*GAGPRA Trigger: TGCTCTGGGACCTGCCCCTCACGTTCTCTTGGGGAC...AAATGTATGTGATGACTGTATAAGGAGGCCTGTGTGTATGAATTTATAGGGAGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000329553.3 |
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| 3UTR-3UTR GCA 90 bp | CCCTATAAATTCATACACACAGGCCTCCTTATACAGTCATCACATACATTTTTACACACTCAGCAGGGATaGGTAGTGTCCTGGCTCGGG | + |
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Preference number: 2 (lower is better) Translates to: PYKFIHTGLLIQSSHTFLHTQQG*VVSWLG Trigger: CCCGAGCCAGGACACTACGCATCCCTGCTGAGTGTG...TAAAAATGTATGTGATGACTGTATAAGGAGGCCTGTGTGTATGAATTTATAGGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000329553.3 |
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| 3UTR-3UTR TCA 90 bp | CCCTATAAATTCATACACACAGGCCTCCTTATACAGTCATCACATACATTTTTAGCTGACTTTCTGTCATaGGTAGTGTGCAGGCCAGGG | + |
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Preference number: 2 (lower is better) Translates to: PYKFIHTGLLIQSSHTFLADFLS*VVCRPG Trigger: CCCTGGCCTGCACACTACTCATGACAGAAAGTCAGC...TAAAAATGTATGTGATGACTGTATAAGGAGGCCTGTGTGTATGAATTTATAGGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000329553.3 |
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| 3UTR-3UTR GCA 90 bp | ACTCCCTATAAATTCATACACACAGGCCTCCTTATACAGTCATCACATACATTTTTGCCCAGGCTGGAATaGAATGGTGCGATCTCGACT | + |
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Preference number: 2 (lower is better) Translates to: TPYKFIHTGLLIQSSHTFLPRLE*NGAIST Trigger: AGTCGAGATCGCACCATTGCATTCCAGCCTGGGCAA...AAATGTATGTGATGACTGTATAAGGAGGCCTGTGTGTATGAATTTATAGGGAGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000329553.3 |
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| 3UTR-3UTR TCA 90 bp | GAGTTTCTCCACGTTGGTCAGGCTGGTCCTTTTTGTTACTCTTATGGGAATTATTCTCAAAGGCATGCATaGGTGCACCAAAAACGAATT | + |
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Preference number: 2 (lower is better) Translates to: EFLHVGQAGPFCYSYGNYSQRHA*VHQKRI Trigger: AATTCGTTTTTGGTGCACTCATGCATGCCTTTGAGA...ATAATTCCCATAAGAGTAACAAAAAGGACCAGCCTGACCAACGTGGAGAAACTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000329553.3 |
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| 3UTR-3UTR GCA 90 bp | GAGTTTCTCCACGTTGGTCAGGCTGGTCCTTTTTGTTACTCTTATGGGAATTATAAAGGCATGCATGAGTaGACCAAAAACGAATTGCCA | + |
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Preference number: 2 (lower is better) Translates to: EFLHVGQAGPFCYSYGNYKGMHE*TKNELP Trigger: TGGCAATTCGTTTTTGGTGCACTCATGCATGCCTTT...ATAATTCCCATAAGAGTAACAAAAAGGACCAGCCTGACCAACGTGGAGAAACTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000329553.3 |
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| 3UTR-3UTR GCA 90 bp | CCCTATAAATTCATACACACAGGCCTCCTTATACAGTCATCACATACATTTTTACCAAGAAGTGGAGGTTaGAGTGAGCCGAGATTGTGT | + |
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Preference number: 2 (lower is better) Translates to: PYKFIHTGLLIQSSHTFLPRSGG*SEPRLC Trigger: ACACAATCTCGGCTCACTGCAACCTCCACTTCTTGG...TAAAAATGTATGTGATGACTGTATAAGGAGGCCTGTGTGTATGAATTTATAGGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000329553.3 |
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| 3UTR-3UTR CCA 90 bp | CCCTATAAATTCATACACACAGGCCTCCTTATACAGTCATCACATACATTTTTAAGGTTAAGTAGGAGGTaGAGTGGGCGACTATCTAGG | + |
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Preference number: 2 (lower is better) Translates to: PYKFIHTGLLIQSSHTFLRLSRR*SGRLSR Trigger: CCTAGATAGTCGCCCACTCCACCTCCTACTTAACCT...TAAAAATGTATGTGATGACTGTATAAGGAGGCCTGTGTGTATGAATTTATAGGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000329553.3 |
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| 3UTR-3UTR TCA 90 bp | CCCTATAAATTCATACACACAGGCCTCCTTATACAGTCATCACATACATTTTTATCATCACCTGATCAGTaGGTGACAATGCAGAAGGAG | + |
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Preference number: 2 (lower is better) Translates to: PYKFIHTGLLIQSSHTFLSSPDQ*VTMQKE Trigger: CTCCTTCTGCATTGTCACTCACTGATCAGGTGATGA...TAAAAATGTATGTGATGACTGTATAAGGAGGCCTGTGTGTATGAATTTATAGGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000329553.3 |
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| 3UTR-3UTR CCA 90 bp | ACTCCCTATAAATTCATACACACAGGCCTCCTTATACAGTCATCACATACATTTCCACGTTGGTCAGGCTaGTCCTTTTTGTTACTCTTA | + |
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Preference number: 2 (lower is better) Translates to: TPYKFIHTGLLIQSSHTFPRWSG*SFLLLL Trigger: TAAGAGTAACAAAAAGGACCAGCCTGACCAACGTGG...AAATGTATGTGATGACTGTATAAGGAGGCCTGTGTGTATGAATTTATAGGGAGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000329553.3 |
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| 3UTR-3UTR TCA 90 bp | ACTCCCTATAAATTCATACACACAGGCCTCCTTATACAGTCATCACATACATTTGAAGAATTCATCACCTaGTCAGTGAGTGACAATGCA | + |
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Preference number: 2 (lower is better) Translates to: TPYKFIHTGLLIQSSHTFEEFIT*SVSDNA Trigger: TGCATTGTCACTCACTGATCAGGTGATGAATTCTTC...AAATGTATGTGATGACTGTATAAGGAGGCCTGTGTGTATGAATTTATAGGGAGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000329553.3 |
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| 3UTR-3UTR CCA 90 bp | CCCTATAAATTCATACACACAGGCCTCCTTATACAGTCATCACATACATTTTTATTTTTGTTACTCTTATaGGAATTATTCGGCGGGTTA | + |
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Preference number: 2 (lower is better) Translates to: PYKFIHTGLLIQSSHTFLFLLLL*ELFGGL Trigger: TAACCCGCCGAATAATTCCCATAAGAGTAACAAAAA...TAAAAATGTATGTGATGACTGTATAAGGAGGCCTGTGTGTATGAATTTATAGGG 34% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000329553.3 |
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| 3UTR-3UTR CAA 90 bp | ACTCCCTATAAATTCATACACACAGGCCTCCTTATACAGTCATCACATACATTTCAGAGTTTCTCCACGTaGGTCAGGCTGGTCCTTTTT | + |
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Preference number: 3 (lower is better) Translates to: TPYKFIHTGLLIQSSHTFQSFST*VRLVLF Trigger: AAAAAGGACCAGCCTGACCAACGTGGAGAAACTCTG...AAATGTATGTGATGACTGTATAAGGAGGCCTGTGTGTATGAATTTATAGGGAGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000329553.3 |
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| 3UTR-3UTR CAA 90 bp | ACTCCCTATAAATTCATACACACAGGCCTCCTTATACAGTCATCACATACATTTAGACAGGAGAATCACTaGAACCCAAGAAGTGGAGGT | + |
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Preference number: 3 (lower is better) Translates to: TPYKFIHTGLLIQSSHTFRQENH*NPRSGG Trigger: ACCTCCACTTCTTGGGTTCAAGTGATTCTCCTGTCT...AAATGTATGTGATGACTGTATAAGGAGGCCTGTGTGTATGAATTTATAGGGAGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000329553.3 |
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| 3UTR-3UTR CAA 90 bp | CCCTATAAATTCATACACACAGGCCTCCTTATACAGTCATCACATACATTTTTAAATGCAGAAGGAGCTTaGAAAACTGGCTCTATGAGA | + |
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Preference number: 3 (lower is better) Translates to: PYKFIHTGLLIQSSHTFLNAEGA*KTGSMR Trigger: TCTCATAGAGCCAGTTTTCAAAGCTCCTTCTGCATT...TAAAAATGTATGTGATGACTGTATAAGGAGGCCTGTGTGTATGAATTTATAGGG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000329553.3 |
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| 3UTR-3UTR CAA 90 bp | ACTCCCTATAAATTCATACACACAGGCCTCCTTATACAGTCATCACATACATTTTCAGGCTGGTCCTTTTaGTTACTCTTATGGGAATTA | + |
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Preference number: 3 (lower is better) Translates to: TPYKFIHTGLLIQSSHTFSGWSF*LLLWEL Trigger: TAATTCCCATAAGAGTAACAAAAAGGACCAGCCTGA...AAATGTATGTGATGACTGTATAAGGAGGCCTGTGTGTATGAATTTATAGGGAGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000329553.3 |
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| CDS-3UTR TCA 90 bp | GAGTTTCTCCACGTTGGTCAGGCTGGTCCTTTTTGTTACTCTTATGGGAATTATCTTGAGGAGACACCTTaGGGGAGCGGACCCTCCCCC | + |
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Preference number: 4 (lower is better) Translates to: EFLHVGQAGPFCYSYGNYLEETP*GSGPSP Trigger: GGGGGAGGGTCCGCTCCCTCAAGGTGTCTCCTCAAG...ATAATTCCCATAAGAGTAACAAAAAGGACCAGCCTGACCAACGTGGAGAAACTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000329553.3 |
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| CDS-3UTR TCA 90 bp | GAGTTTCTCCACGTTGGTCAGGCTGGTCCTTTTTGTTACTCTTATGGGAATTATGCACTTGCCACCCCTTaGGGAGACACCTTGAGGGAG | + |
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Preference number: 4 (lower is better) Translates to: EFLHVGQAGPFCYSYGNYALATP*GDTLRE Trigger: CTCCCTCAAGGTGTCTCCTCAAGGGGTGGCAAGTGC...ATAATTCCCATAAGAGTAACAAAAAGGACCAGCCTGACCAACGTGGAGAAACTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000329553.3 |
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| CDS-3UTR CCA 90 bp | GAGTTTCTCCACGTTGGTCAGGCTGGTCCTTTTTGTTACTCTTATGGGAATTATCAGAAGATGGAGGGGTaGGGGTCCTTCCTCTGGCTC | + |
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Preference number: 4 (lower is better) Translates to: EFLHVGQAGPFCYSYGNYQKMEG*GSFLWL Trigger: GAGCCAGAGGAAGGACCCCCACCCCTCCATCTTCTG...ATAATTCCCATAAGAGTAACAAAAAGGACCAGCCTGACCAACGTGGAGAAACTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000329553.3 |
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| CDS-3UTR GCA 90 bp | GAGTTTCTCCACGTTGGTCAGGCTGGTCCTTTTTGTTACTCTTATGGGAATTATAAACTGGCCAGTACTTaGTCCCCGGAACTCCGCAGG | + |
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Preference number: 4 (lower is better) Translates to: EFLHVGQAGPFCYSYGNYKLAST*SPELRR Trigger: CCTGCGGAGTTCCGGGGAGCAAGTACTGGCCAGTTT...ATAATTCCCATAAGAGTAACAAAAAGGACCAGCCTGACCAACGTGGAGAAACTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000329553.3 |
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| CDS-3UTR CCA 90 bp | GAGTTTCTCCACGTTGGTCAGGCTGGTCCTTTTTGTTACTCTTATGGGAATTATTGGGGGTCCTTCCTCTaGCTCTTCAGCTTCGGAAGC | + |
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Preference number: 4 (lower is better) Translates to: EFLHVGQAGPFCYSYGNYWGSFL*LFSFGS Trigger: GCTTCCGAAGCTGAAGAGCCAGAGGAAGGACCCCCA...ATAATTCCCATAAGAGTAACAAAAAGGACCAGCCTGACCAACGTGGAGAAACTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000329553.3 |
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| CDS-3UTR CCA 90 bp | GAGTTTCTCCACGTTGGTCAGGCTGGTCCTTTTTGTTACTCTTATGGGAATTATCCTTGGTTGATGCCCTaGTCTCTGCCCTTTCCCCCT | + |
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Preference number: 4 (lower is better) Translates to: EFLHVGQAGPFCYSYGNYPWLMP*SLPFPP Trigger: AGGGGGAAAGGGCAGAGACCAGGGCATCAACCAAGG...ATAATTCCCATAAGAGTAACAAAAAGGACCAGCCTGACCAACGTGGAGAAACTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000329553.3 |
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| CDS-3UTR CCA 90 bp | GAGTTTCTCCACGTTGGTCAGGCTGGTCCTTTTTGTTACTCTTATGGGAATTATGAGGATCGCTGCCCTTaGTTGATGCCCTGGTCTCTG | + |
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Preference number: 4 (lower is better) Translates to: EFLHVGQAGPFCYSYGNYEDRCP*LMPWSL Trigger: CAGAGACCAGGGCATCAACCAAGGGCAGCGATCCTC...ATAATTCCCATAAGAGTAACAAAAAGGACCAGCCTGACCAACGTGGAGAAACTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000329553.3 |
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| CDS-3UTR TCA 90 bp | ACTCCCTATAAATTCATACACACAGGCCTCCTTATACAGTCATCACATACATTTATCGCTGCCCTTGGTTaGTGCCCTGGTCTCTGCCCT | + |
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Preference number: 4 (lower is better) Translates to: TPYKFIHTGLLIQSSHTFIAALG*CPGLCP Trigger: AGGGCAGAGACCAGGGCATCAACCAAGGGCAGCGAT...AAATGTATGTGATGACTGTATAAGGAGGCCTGTGTGTATGAATTTATAGGGAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000329553.3 |
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| CDS-3UTR TCA 90 bp | CCCTATAAATTCATACACACAGGCCTCCTTATACAGTCATCACATACATTTTTAGTGGTCACCCCCTCCTaGGGATCGCTGCCCTTGGTT | + |
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Preference number: 4 (lower is better) Translates to: PYKFIHTGLLIQSSHTFLVVTPS*GSLPLV Trigger: AACCAAGGGCAGCGATCCTCAGGAGGGGGTGACCAC...TAAAAATGTATGTGATGACTGTATAAGGAGGCCTGTGTGTATGAATTTATAGGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000329553.3 |
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| CDS-3UTR GCA 90 bp | CCCTATAAATTCATACACACAGGCCTCCTTATACAGTCATCACATACATTTTTACCTGGGCCATTTTCCTaGCGACCTCCCACCTCCTGG | + |
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Preference number: 4 (lower is better) Translates to: PYKFIHTGLLIQSSHTFLPGPFS*RPPTSW Trigger: CCAGGAGGTGGGAGGTCGGCAGGAAAATGGCCCAGG...TAAAAATGTATGTGATGACTGTATAAGGAGGCCTGTGTGTATGAATTTATAGGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000329553.3 |
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| CDS-3UTR GCA 90 bp | ACTCCCTATAAATTCATACACACAGGCCTCCTTATACAGTCATCACATACATTTCACACTCAGCAGGGATaGGTAGTGTCCTGGCTCGGG | + |
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Preference number: 4 (lower is better) Translates to: TPYKFIHTGLLIQSSHTFHTQQG*VVSWLG Trigger: CCCGAGCCAGGACACTACGCATCCCTGCTGAGTGTG...AAATGTATGTGATGACTGTATAAGGAGGCCTGTGTGTATGAATTTATAGGGAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000329553.3 |
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| CDS-3UTR GCA 90 bp | GAGTTTCTCCACGTTGGTCAGGCTGGTCCTTTTTGTTACTCTTATGGGAATTATTTGCCCAGGCTGGAATaGAATGGTGCGATCTCGACT | + |
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Preference number: 4 (lower is better) Translates to: EFLHVGQAGPFCYSYGNYLPRLE*NGAIST Trigger: AGTCGAGATCGCACCATTGCATTCCAGCCTGGGCAA...ATAATTCCCATAAGAGTAACAAAAAGGACCAGCCTGACCAACGTGGAGAAACTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000329553.3 |
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| CDS-3UTR CCA 90 bp | CCCTATAAATTCATACACACAGGCCTCCTTATACAGTCATCACATACATTTTTACGACCTCCCACCTCCTaGGGCAGAAGATGGAGGGGT | + |
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Preference number: 4 (lower is better) Translates to: PYKFIHTGLLIQSSHTFLRPPTS*GRRWRG Trigger: ACCCCTCCATCTTCTGCCCCAGGAGGTGGGAGGTCG...TAAAAATGTATGTGATGACTGTATAAGGAGGCCTGTGTGTATGAATTTATAGGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000329553.3 |
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| CDS-3UTR GCA 90 bp | CCCTATAAATTCATACACACAGGCCTCCTTATACAGTCATCACATACATTTTTACCTCCTGAGGATCGCTaGCCTTGGTTGATGCCCTGG | + |
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Preference number: 4 (lower is better) Translates to: PYKFIHTGLLIQSSHTFLPPEDR*PWLMPW Trigger: CCAGGGCATCAACCAAGGGCAGCGATCCTCAGGAGG...TAAAAATGTATGTGATGACTGTATAAGGAGGCCTGTGTGTATGAATTTATAGGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000329553.3 |
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| CDS-3UTR GCA 90 bp | ACTCCCTATAAATTCATACACACAGGCCTCCTTATACAGTCATCACATACATTTGAAGCCTCTAGCCTCTaGACACTCAGCAGGGATGCG | + |
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Preference number: 4 (lower is better) Translates to: TPYKFIHTGLLIQSSHTFEASSL*TLSRDA Trigger: CGCATCCCTGCTGAGTGTGCAGAGGCTAGAGGCTTC...AAATGTATGTGATGACTGTATAAGGAGGCCTGTGTGTATGAATTTATAGGGAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000329553.3 |
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| CDS-3UTR CCA 90 bp | CCCTATAAATTCATACACACAGGCCTCCTTATACAGTCATCACATACATTTTTAGCATCTCCAGGTGTCTaGATCCAAGGTCGCCACGGC | + |
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Preference number: 4 (lower is better) Translates to: PYKFIHTGLLIQSSHTFLASPGV*IQGRHG Trigger: GCCGTGGCGACCTTGGATCCAGACACCTGGAGATGC...TAAAAATGTATGTGATGACTGTATAAGGAGGCCTGTGTGTATGAATTTATAGGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000329553.3 |
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| CDS-3UTR CCA 90 bp | CCCTATAAATTCATACACACAGGCCTCCTTATACAGTCATCACATACATTTTTAGGATGCGTAGTGTCCTaGCTCGGGTGTCCCCAAGAG | + |
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Preference number: 4 (lower is better) Translates to: PYKFIHTGLLIQSSHTFLGCVVS*LGCPQE Trigger: CTCTTGGGGACACCCGAGCCAGGACACTACGCATCC...TAAAAATGTATGTGATGACTGTATAAGGAGGCCTGTGTGTATGAATTTATAGGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000329553.3 |
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| CDS-3UTR TCA 90 bp | GAGTTTCTCCACGTTGGTCAGGCTGGTCCTTTTTGTTACTCTTATGGGAATTATCTCCGCAGGTATTCTTaGCGCTTTGACATGGGTAAA | + |
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Preference number: 4 (lower is better) Translates to: EFLHVGQAGPFCYSYGNYLRRYS*RFDMGK Trigger: TTTACCCATGTCAAAGCGTCAAGAATACCTGCGGAG...ATAATTCCCATAAGAGTAACAAAAAGGACCAGCCTGACCAACGTGGAGAAACTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000329553.3 |
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| CDS-3UTR TCA 90 bp | ACTCCCTATAAATTCATACACACAGGCCTCCTTATACAGTCATCACATACATTTGCTGACTTTCTGTCATaGGTAGTGTGCAGGCCAGGG | + |
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Preference number: 4 (lower is better) Translates to: TPYKFIHTGLLIQSSHTFADFLS*VVCRPG Trigger: CCCTGGCCTGCACACTACTCATGACAGAAAGTCAGC...AAATGTATGTGATGACTGTATAAGGAGGCCTGTGTGTATGAATTTATAGGGAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000329553.3 |
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| CDS-3UTR GCA 90 bp | ACTCCCTATAAATTCATACACACAGGCCTCCTTATACAGTCATCACATACATTTTGGATGAGGAGCACTTaGCACCCCTTGAGGAGACAC | + |
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Preference number: 4 (lower is better) Translates to: TPYKFIHTGLLIQSSHTFWMRST*HPLRRH Trigger: GTGTCTCCTCAAGGGGTGGCAAGTGCTCCTCATCCA...AAATGTATGTGATGACTGTATAAGGAGGCCTGTGTGTATGAATTTATAGGGAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000329553.3 |
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| CDS-3UTR CCA 90 bp | CCCTATAAATTCATACACACAGGCCTCCTTATACAGTCATCACATACATTTTTACTTGCACTGGGAAACTaGCCAGTACTTGCTCCCCGG | + |
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Preference number: 4 (lower is better) Translates to: PYKFIHTGLLIQSSHTFLLALGN*PVLAPR Trigger: CCGGGGAGCAAGTACTGGCCAGTTTCCCAGTGCAAG...TAAAAATGTATGTGATGACTGTATAAGGAGGCCTGTGTGTATGAATTTATAGGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000329553.3 |
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| CDS-3UTR TCA 90 bp | ACTCCCTATAAATTCATACACACAGGCCTCCTTATACAGTCATCACATACATTTACTGATTCATTTGGATaGGGAGCACTTGCCACCCCT | + |
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Preference number: 4 (lower is better) Translates to: TPYKFIHTGLLIQSSHTFTDSFG*GALATP Trigger: AGGGGTGGCAAGTGCTCCTCATCCAAATGAATCAGT...AAATGTATGTGATGACTGTATAAGGAGGCCTGTGTGTATGAATTTATAGGGAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000329553.3 |
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| CDS-3UTR TCA 90 bp | ACTCCCTATAAATTCATACACACAGGCCTCCTTATACAGTCATCACATACATTTCCAGGAGACAGAGACTaGTTCATTTGGATGAGGAGC | + |
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Preference number: 4 (lower is better) Translates to: TPYKFIHTGLLIQSSHTFPGDRD*FIWMRS Trigger: GCTCCTCATCCAAATGAATCAGTCTCTGTCTCCTGG...AAATGTATGTGATGACTGTATAAGGAGGCCTGTGTGTATGAATTTATAGGGAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000329553.3 |
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| CDS-3UTR GCA 90 bp | ACTCCCTATAAATTCATACACACAGGCCTCCTTATACAGTCATCACATACATTTAAGTCAATCGTGGCTTaGACTGGGAAACTGGCCAGT | + |
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Preference number: 4 (lower is better) Translates to: TPYKFIHTGLLIQSSHTFKSIVA*TGKLAS Trigger: ACTGGCCAGTTTCCCAGTGCAAGCCACGATTGACTT...AAATGTATGTGATGACTGTATAAGGAGGCCTGTGTGTATGAATTTATAGGGAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000329553.3 |
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| CDS-3UTR GCA 90 bp | ACTCCCTATAAATTCATACACACAGGCCTCCTTATACAGTCATCACATACATTTCCAAGAAGTGGAGGTTaGAGTGAGCCGAGATTGTGT | + |
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Preference number: 4 (lower is better) Translates to: TPYKFIHTGLLIQSSHTFPRSGG*SEPRLC Trigger: ACACAATCTCGGCTCACTGCAACCTCCACTTCTTGG...AAATGTATGTGATGACTGTATAAGGAGGCCTGTGTGTATGAATTTATAGGGAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000329553.3 |
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| CDS-3UTR TCA 90 bp | ACTCCCTATAAATTCATACACACAGGCCTCCTTATACAGTCATCACATACATTTTCATCACCTGATCAGTaGGTGACAATGCAGAAGGAG | + |
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Preference number: 4 (lower is better) Translates to: TPYKFIHTGLLIQSSHTFSSPDQ*VTMQKE Trigger: CTCCTTCTGCATTGTCACTCACTGATCAGGTGATGA...AAATGTATGTGATGACTGTATAAGGAGGCCTGTGTGTATGAATTTATAGGGAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000329553.3 |
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| CDS-3UTR CCA 90 bp | ACTCCCTATAAATTCATACACACAGGCCTCCTTATACAGTCATCACATACATTTGATCCAAAAGTGTGTTaGTCAGCCCTAGGTTCAAGC | + |
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Preference number: 4 (lower is better) Translates to: TPYKFIHTGLLIQSSHTFDPKVC*SALGSS Trigger: GCTTGAACCTAGGGCTGACCAACACACTTTTGGATC...AAATGTATGTGATGACTGTATAAGGAGGCCTGTGTGTATGAATTTATAGGGAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000329553.3 |
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| CDS-3UTR TCA 90 bp | CCCTATAAATTCATACACACAGGCCTCCTTATACAGTCATCACATACATTTTTAACTCTTACAGGATGCTaGAACCCAAAGGCTCCCTTT | + |
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Preference number: 4 (lower is better) Translates to: PYKFIHTGLLIQSSHTFLTLTGC*NPKAPF Trigger: AAAGGGAGCCTTTGGGTTTCAGCATCCTGTAAGAGT...TAAAAATGTATGTGATGACTGTATAAGGAGGCCTGTGTGTATGAATTTATAGGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000329553.3 |
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| CDS-3UTR CCA 90 bp | CCCTATAAATTCATACACACAGGCCTCCTTATACAGTCATCACATACATTTTTAAGAGTTTCTCCACGTTaGTCAGGCTGGTCCTTTTTG | + |
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Preference number: 4 (lower is better) Translates to: PYKFIHTGLLIQSSHTFLRVSPR*SGWSFL Trigger: CAAAAAGGACCAGCCTGACCAACGTGGAGAAACTCT...TAAAAATGTATGTGATGACTGTATAAGGAGGCCTGTGTGTATGAATTTATAGGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000329553.3 |
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| CDS-3UTR CCA 90 bp | GAGTTTCTCCACGTTGGTCAGGCTGGTCCTTTTTGTTACTCTTATGGGAATTATTTTTTGTTACTCTTATaGGAATTATTCGGCGGGTTA | + |
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Preference number: 4 (lower is better) Translates to: EFLHVGQAGPFCYSYGNYFLLLL*ELFGGL Trigger: TAACCCGCCGAATAATTCCCATAAGAGTAACAAAAA...ATAATTCCCATAAGAGTAACAAAAAGGACCAGCCTGACCAACGTGGAGAAACTC 39% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENST00000329553.3 |
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| CDS-3UTR CCA 90 bp | CCCTATAAATTCATACACACAGGCCTCCTTATACAGTCATCACATACATTTTTACCACGTTGGTCAGGCTaGTCCTTTTTGTTACTCTTA | + |
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Preference number: 4 (lower is better) Translates to: PYKFIHTGLLIQSSHTFLPRWSG*SFLLLL Trigger: TAAGAGTAACAAAAAGGACCAGCCTGACCAACGTGG...TAAAAATGTATGTGATGACTGTATAAGGAGGCCTGTGTGTATGAATTTATAGGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000329553.3 |
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| CDS-3UTR TCA 90 bp | CCCTATAAATTCATACACACAGGCCTCCTTATACAGTCATCACATACATTTTTAGAAGAATTCATCACCTaGTCAGTGAGTGACAATGCA | + |
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Preference number: 4 (lower is better) Translates to: PYKFIHTGLLIQSSHTFLEEFIT*SVSDNA Trigger: TGCATTGTCACTCACTGATCAGGTGATGAATTCTTC...TAAAAATGTATGTGATGACTGTATAAGGAGGCCTGTGTGTATGAATTTATAGGG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000329553.3 |
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| CDS-3UTR GCA 90 bp | CCCTATAAATTCATACACACAGGCCTCCTTATACAGTCATCACATACATTTTTAAAAGGCATGCATGAGTaGACCAAAAACGAATTGCCA | + |
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Preference number: 4 (lower is better) Translates to: PYKFIHTGLLIQSSHTFLKGMHE*TKNELP Trigger: TGGCAATTCGTTTTTGGTGCACTCATGCATGCCTTT...TAAAAATGTATGTGATGACTGTATAAGGAGGCCTGTGTGTATGAATTTATAGGG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000329553.3 |
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| CDS-3UTR CAA 90 bp | GAGTTTCTCCACGTTGGTCAGGCTGGTCCTTTTTGTTACTCTTATGGGAATTATGATCGCTGCCCTTGGTaGATGCCCTGGTCTCTGCCC | + |
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Preference number: 5 (lower is better) Translates to: EFLHVGQAGPFCYSYGNYDRCPW*MPWSLP Trigger: GGGCAGAGACCAGGGCATCAACCAAGGGCAGCGATC...ATAATTCCCATAAGAGTAACAAAAAGGACCAGCCTGACCAACGTGGAGAAACTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000329553.3 |
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| CDS-3UTR CAA 90 bp | GAGTTTCTCCACGTTGGTCAGGCTGGTCCTTTTTGTTACTCTTATGGGAATTATAGCACTTGCCACCCCTaGAGGAGACACCTTGAGGGA | + |
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Preference number: 5 (lower is better) Translates to: EFLHVGQAGPFCYSYGNYSTCHP*RRHLEG Trigger: TCCCTCAAGGTGTCTCCTCAAGGGGTGGCAAGTGCT...ATAATTCCCATAAGAGTAACAAAAAGGACCAGCCTGACCAACGTGGAGAAACTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000329553.3 |
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| CDS-3UTR CAA 90 bp | ACTCCCTATAAATTCATACACACAGGCCTCCTTATACAGTCATCACATACATTTGAAACTGGCCAGTACTaGCTCCCCGGAACTCCGCAG | + |
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Preference number: 5 (lower is better) Translates to: TPYKFIHTGLLIQSSHTFETGQY*LPGTPQ Trigger: CTGCGGAGTTCCGGGGAGCAAGTACTGGCCAGTTTC...AAATGTATGTGATGACTGTATAAGGAGGCCTGTGTGTATGAATTTATAGGGAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000329553.3 |
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| CDS-3UTR CAA 90 bp | GAGTTTCTCCACGTTGGTCAGGCTGGTCCTTTTTGTTACTCTTATGGGAATTATCAGAGTTTCTCCACGTaGGTCAGGCTGGTCCTTTTT | + |
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Preference number: 5 (lower is better) Translates to: EFLHVGQAGPFCYSYGNYQSFST*VRLVLF Trigger: AAAAAGGACCAGCCTGACCAACGTGGAGAAACTCTG...ATAATTCCCATAAGAGTAACAAAAAGGACCAGCCTGACCAACGTGGAGAAACTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000329553.3 |
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| CDS-3UTR CAA 90 bp | ACTCCCTATAAATTCATACACACAGGCCTCCTTATACAGTCATCACATACATTTGAAGTCAATCGTGGCTaGCACTGGGAAACTGGCCAG | + |
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Preference number: 5 (lower is better) Translates to: TPYKFIHTGLLIQSSHTFEVNRG*HWETGQ Trigger: CTGGCCAGTTTCCCAGTGCAAGCCACGATTGACTTC...AAATGTATGTGATGACTGTATAAGGAGGCCTGTGTGTATGAATTTATAGGGAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000329553.3 |
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| CDS-3UTR CAA 90 bp | GAGTTTCTCCACGTTGGTCAGGCTGGTCCTTTTTGTTACTCTTATGGGAATTATAGACAGGAGAATCACTaGAACCCAAGAAGTGGAGGT | + |
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Preference number: 5 (lower is better) Translates to: EFLHVGQAGPFCYSYGNYRQENH*NPRSGG Trigger: ACCTCCACTTCTTGGGTTCAAGTGATTCTCCTGTCT...ATAATTCCCATAAGAGTAACAAAAAGGACCAGCCTGACCAACGTGGAGAAACTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000329553.3 |
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| CDS-3UTR CAA 90 bp | CCCTATAAATTCATACACACAGGCCTCCTTATACAGTCATCACATACATTTTTAACCCAAAGGCTCCCTTaGATCCAAAAGTGTGTTGGT | + |
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Preference number: 5 (lower is better) Translates to: PYKFIHTGLLIQSSHTFLTQRLP*IQKCVG Trigger: ACCAACACACTTTTGGATCAAAGGGAGCCTTTGGGT...TAAAAATGTATGTGATGACTGTATAAGGAGGCCTGTGTGTATGAATTTATAGGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000329553.3 |
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| CDS-3UTR CAA 90 bp | CCCTATAAATTCATACACACAGGCCTCCTTATACAGTCATCACATACATTTTTACAGAGACTGATTCATTaGGATGAGGAGCACTTGCCA | + |
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Preference number: 5 (lower is better) Translates to: PYKFIHTGLLIQSSHTFLQRLIH*DEEHLP Trigger: TGGCAAGTGCTCCTCATCCAAATGAATCAGTCTCTG...TAAAAATGTATGTGATGACTGTATAAGGAGGCCTGTGTGTATGAATTTATAGGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000329553.3 |
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| CDS-3UTR CAA 90 bp | ACTCCCTATAAATTCATACACACAGGCCTCCTTATACAGTCATCACATACATTTGGTATTCTTGACGCTTaGACATGGGTAAATAGACTC | + |
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Preference number: 5 (lower is better) Translates to: TPYKFIHTGLLIQSSHTFGILDA*TWVNRL Trigger: GAGTCTATTTACCCATGTCAAAGCGTCAAGAATACC...AAATGTATGTGATGACTGTATAAGGAGGCCTGTGTGTATGAATTTATAGGGAGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000329553.3 |
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| CDS CAA 90 bp | CGGCCGCCGCTTCGGGCTCCATGGTGCCGGCGGAGCCCGCGCCCCTaGCTGCGGCGCCGGCCTACGAGCGCGCCTAGATCCACTCGGGCT | + |
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Preference number: 6 (lower is better) Translates to: RPPLRAPWCRRSPRP*LRRRPTSAPRSTRA Trigger: AGCCCGAGTGGATCTAGGCGCGCTCGTAGGCCGGCGCCGCAGCAAGGGGCGCGGGCTCCGCCGGCACCATGGAGCCCGAAGCGGCGGCCG 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000329553.3 |
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| CDS GCA 72 bp | CAAGGTCGCCACGGCGCGGGGCTGCTGGGCTTCCCCTaGCGGATGTGGGATGTGAGGAGTCCCGGCTTCTCC | + |
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Preference number: 6 (lower is better) Translates to: QGRHGAGLLGFP*RMWDVRSPGFS Trigger: GGAGAAGCCGGGACTCCTCACATCCCACATCCGGCAGGGGAAGCCCAGCAGCCCCGCGCCGTGGCGACCTTG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000485272.5 |
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| CDS TCA 72 bp | CGGGGCTGCTGGGCTTCCCCTGCCGGATGTGGGATGTaGGGAGTCCCGGCTTCTCCGTCCCTCTGTGGTCCC | + |
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Preference number: 6 (lower is better) Translates to: RGCWASPAGCGM*GVPASPSLCGP Trigger: GGGACCACAGAGGGACGGAGAAGCCGGGACTCCTCACATCCCACATCCGGCAGGGGAAGCCCAGCAGCCCCG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000485272.5 |
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| CDS CCA 72 bp | CCCCGGAACTCCGCAGGTATTCTTGACGCTTTGACATaGGTAAATAGACTCGGCCTTCCAGTTCTGGTCAGC | + |
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Preference number: 6 (lower is better) Translates to: PRNSAGILDALT*VNRLGLPVLVS Trigger: GCTGACCAGAACTGGAAGGCCGAGTCTATTTACCCATGTCAAAGCGTCAAGAATACCTGCGGAGTTCCGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000490393.1 |
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| CDS CAA 72 bp | CTTGCTCCCCGGAACTCCGCAGGTATTCTTGACGCTTaGACATGGGTAAATAGACTCGGCCTTCCAGTTCTG | + |
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Preference number: 6 (lower is better) Translates to: LAPRNSAGILDA*TWVNRLGLPVL Trigger: CAGAACTGGAAGGCCGAGTCTATTTACCCATGTCAAAGCGTCAAGAATACCTGCGGAGTTCCGGGGAGCAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000490393.1 |
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