RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RIPOR3 (Homo sapiens)

Ensembl gene IDs: ENSG00000042062

Ensembl transcript IDs: ENST00000045083.6, ENST00000327979.8, ENST00000462493.1, ENST00000462842.1, ENST00000482129.1, ENST00000488529.5

Found 618 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp AGCAGGGCCAGCCACCTGCCAGCCTGCTGCATCCCCAGTGCCTCTTaGCGCAGAAGTGCCGAGCAGCTGACCGGCAGCGAGGCCTGGAGT +
Preference number: 1 (lower is better)
Translates to: SRASHLPACCIPSAS*RRSAEQLTGSEAWS
Trigger: ACTCCAGGCCTCGCTGCCGGTCAGCTGCTCGGCACTTCTGCGTCAAGAGGCACTGGGGATGCAGCAGGCTGGCAGGTGGCTGGCCCTGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
3UTR TCA 90 bp CCTGCTGCATCCCCAGTGCCTCTTGACGCAGAAGTGCCGAGCAGCTaGCCGGCAGCGAGGCCTGGAGTTCTACACACTTGCCTTGGAGCC +
Preference number: 1 (lower is better)
Translates to: PAASPVPLDAEVPSS*PAARPGVLHTCLGA
Trigger: GGCTCCAAGGCAAGTGTGTAGAACTCCAGGCCTCGCTGCCGGTCAGCTGCTCGGCACTTCTGCGTCAAGAGGCACTGGGGATGCAGCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
3UTR GCA 90 bp CCACCTGCCAGCCTGCTGCATCCCCAGTGCCTCTTGACGCAGAAGTaGCGAGCAGCTGACCGGCAGCGAGGCCTGGAGTTCTACACACTT +
Preference number: 1 (lower is better)
Translates to: PPASLLHPQCLLTQK*RAADRQRGLEFYTL
Trigger: AAGTGTGTAGAACTCCAGGCCTCGCTGCCGGTCAGCTGCTCGGCACTTCTGCGTCAAGAGGCACTGGGGATGCAGCAGGCTGGCAGGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
3UTR CCA 90 bp CATGCCCTGGGGCTGGGTCAATGGCCGGAGTCTCAGGTAGAGCTCTaGGCAGCTCACACTCCTGGAGGAGTGCACAGCACCATTACCCAG +
Preference number: 1 (lower is better)
Translates to: HALGLGQWPESQVEL*AAHTPGGVHSTITQ
Trigger: CTGGGTAATGGTGCTGTGCACTCCTCCAGGAGTGTGAGCTGCCCAGAGCTCTACCTGAGACTCCGGCCATTGACCCAGCCCCAGGGCATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
3UTR CCA 90 bp CCACCTTCCCCAGCTCACCAAGGTGACACCTGGCTGCTGCTGAAATaGCCTGAGCAGTCTTGCATTAGCAGGGCCAGCCACCTGCCAGCC +
Preference number: 1 (lower is better)
Translates to: PPSPAHQGDTWLLLK*PEQSCISRASHLPA
Trigger: GGCTGGCAGGTGGCTGGCCCTGCTAATGCAAGACTGCTCAGGCCATTTCAGCAGCAGCCAGGTGTCACCTTGGTGAGCTGGGGAAGGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
3UTR TCA 90 bp CCTTCCCACCTTCCCCAGCTCACCAAGGTGACACCTGGCTGCTGCTaGAATGGCCTGAGCAGTCTTGCATTAGCAGGGCCAGCCACCTGC +
Preference number: 1 (lower is better)
Translates to: PSHLPQLTKVTPGCC*NGLSSLALAGPATC
Trigger: GCAGGTGGCTGGCCCTGCTAATGCAAGACTGCTCAGGCCATTTCAGCAGCAGCCAGGTGTCACCTTGGTGAGCTGGGGAAGGTGGGAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
3UTR CCA 90 bp CTGCCTCTGTACAAAAGACCAGCCCATGCCCTGGGGCTGGGTCAATaGCCGGAGTCTCAGGTAGAGCTCTGGGCAGCTCACACTCCTGGA +
Preference number: 1 (lower is better)
Translates to: LPLYKRPAHALGLGQ*PESQVELWAAHTPG
Trigger: TCCAGGAGTGTGAGCTGCCCAGAGCTCTACCTGAGACTCCGGCCATTGACCCAGCCCCAGGGCATGGGCTGGTCTTTTGTACAGAGGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
3UTR CCA 90 bp CTCAACTTGCCTGGCCTTGGCCCTTTTGTAGGTGGCCACCTAGTTTaGCTCAGCTCTGCATCTCGGGGAAGGTCACACAGACCCTCAGCC +
Preference number: 1 (lower is better)
Translates to: LNLPGLGPFVGGHLV*LSSASRGRSHRPSA
Trigger: GGCTGAGGGTCTGTGTGACCTTCCCCGAGATGCAGAGCTGAGCCAAACTAGGTGGCCACCTACAAAAGGGCCAAGGCCAGGCAAGTTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
3UTR CCA 90 bp TGGCTTTGTGCCTTCCCACCTTCCCCAGCTCACCAAGGTGACACCTaGCTGCTGCTGAAATGGCCTGAGCAGTCTTGCATTAGCAGGGCC +
Preference number: 1 (lower is better)
Translates to: WLCAFPPSPAHQGDT*LLLKWPEQSCISRA
Trigger: GGCCCTGCTAATGCAAGACTGCTCAGGCCATTTCAGCAGCAGCCAGGTGTCACCTTGGTGAGCTGGGGAAGGTGGGAAGGCACAAAGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
3UTR CCA 90 bp TCAATGGCCGGAGTCTCAGGTAGAGCTCTGGGCAGCTCACACTCCTaGAGGAGTGCACAGCACCATTACCCAGAGTGCAGGCTATGTCCA +
Preference number: 1 (lower is better)
Translates to: SMAGVSGRALGSSHS*RSAQHHYPECRLCP
Trigger: TGGACATAGCCTGCACTCTGGGTAATGGTGCTGTGCACTCCTCCAGGAGTGTGAGCTGCCCAGAGCTCTACCTGAGACTCCGGCCATTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
3UTR CCA 90 bp GAGCAGCTGACCGGCAGCGAGGCCTGGAGTTCTACACACTTGCCTTaGAGCCTTTTATTTAGGGCCTCAACTTGCCTGGCCTTGGCCCTT +
Preference number: 1 (lower is better)
Translates to: EQLTGSEAWSSTHLP*SLLFRASTCLALAL
Trigger: AAGGGCCAAGGCCAGGCAAGTTGAGGCCCTAAATAAAAGGCTCCAAGGCAAGTGTGTAGAACTCCAGGCCTCGCTGCCGGTCAGCTGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
3UTR CCA 90 bp ACTTGCCTTGGAGCCTTTTATTTAGGGCCTCAACTTGCCTGGCCTTaGCCCTTTTGTAGGTGGCCACCTAGTTTGGCTCAGCTCTGCATC +
Preference number: 1 (lower is better)
Translates to: TCLGAFYLGPQLAWP*PFCRWPPSLAQLCI
Trigger: GATGCAGAGCTGAGCCAAACTAGGTGGCCACCTACAAAAGGGCCAAGGCCAGGCAAGTTGAGGCCCTAAATAAAAGGCTCCAAGGCAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
3UTR CCA 90 bp CTACACACTTGCCTTGGAGCCTTTTATTTAGGGCCTCAACTTGCCTaGCCTTGGCCCTTTTGTAGGTGGCCACCTAGTTTGGCTCAGCTC +
Preference number: 1 (lower is better)
Translates to: LHTCLGAFYLGPQLA*PWPFCRWPPSLAQL
Trigger: GAGCTGAGCCAAACTAGGTGGCCACCTACAAAAGGGCCAAGGCCAGGCAAGTTGAGGCCCTAAATAAAAGGCTCCAAGGCAAGTGTGTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
3UTR TCA 90 bp GTGAACTCTTTCTTTAGGCCAGTTGATGGCTTCTTAGCAGTTTATTaGCGAGATCCTAGGGTAGCTTCCGAAGCTGGGTTGATTGATTGC +
Preference number: 1 (lower is better)
Translates to: VNSFFRPVDGFLAVY*RDPRVASEAGLIDC
Trigger: GCAATCAATCAACCCAGCTTCGGAAGCTACCCTAGGATCTCGTCAATAAACTGCTAAGAAGCCATCAACTGGCCTAAAGAAAGAGTTCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
3UTR-3UTR CCA 90 bp CTGCATCCCCAGTGCCTCTTGACGCAGAAGTGCCGAGCAGCTGACCGGCAGCGAGACCAGCCCATGCCCTaGGGCTGGGTCAATGGCCGG +
Preference number: 2 (lower is better)
Translates to: LHPQCLLTQKCRAADRQRDQPMP*GWVNGR
Trigger: CCGGCCATTGACCCAGCCCCAGGGCATGGGCTGGTC...TCGCTGCCGGTCAGCTGCTCGGCACTTCTGCGTCAAGAGGCACTGGGGATGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
3UTR-3UTR CCA 90 bp GCCGCCGTCTGTGAGCTCCACCAGCACTCGCAGCAAGTCAGTCGGGCTGAGAGTCCCATGCCCTGGGGCTaGGTCAATGGCCGGAGTCTC +
Preference number: 2 (lower is better)
Translates to: AAVCELHQHSQQVSRAESPMPWG*VNGRSL
Trigger: GAGACTCCGGCCATTGACCCAGCCCCAGGGCATGGG...ACTCTCAGCCCGACTGACTTGCTGCGAGTGCTGGTGGAGCTCACAGACGGCGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
3UTR-3UTR CCA 90 bp GCCGCCGTCTGTGAGCTCCACCAGCACTCGCAGCAAGTCAGTCGGGCTGAGAGTCTGGGGCTGGGTCAATaGCCGGAGTCTCAGGTAGAG +
Preference number: 2 (lower is better)
Translates to: AAVCELHQHSQQVSRAESLGLGQ*PESQVE
Trigger: CTCTACCTGAGACTCCGGCCATTGACCCAGCCCCAG...ACTCTCAGCCCGACTGACTTGCTGCGAGTGCTGGTGGAGCTCACAGACGGCGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
3UTR-3UTR CCA 90 bp GGCCTTGGCCCTTTTGTAGGTGGCCACCTAGTTTGGCTCAGCTCTGCATCTCGGGACCAGCCCATGCCCTaGGGCTGGGTCAATGGCCGG +
Preference number: 2 (lower is better)
Translates to: GLGPFVGGHLVWLSSASRDQPMP*GWVNGR
Trigger: CCGGCCATTGACCCAGCCCCAGGGCATGGGCTGGTC...CCGAGATGCAGAGCTGAGCCAAACTAGGTGGCCACCTACAAAAGGGCCAAGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
3UTR-3UTR CCA 90 bp GCCGCCGTCTGTGAGCTCCACCAGCACTCGCAGCAAGTCAGTCGGGCTGAGAGTGGCAGCTCACACTCCTaGAGGAGTGCACAGCACCAT +
Preference number: 2 (lower is better)
Translates to: AAVCELHQHSQQVSRAESGSSHS*RSAQHH
Trigger: ATGGTGCTGTGCACTCCTCCAGGAGTGTGAGCTGCC...ACTCTCAGCCCGACTGACTTGCTGCGAGTGCTGGTGGAGCTCACAGACGGCGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
3UTR-3UTR CCA 90 bp CTGCATCCCCAGTGCCTCTTGACGCAGAAGTGCCGAGCAGCTGACCGGCAGCGATCTCAGGTAGAGCTCTaGGCAGCTCACACTCCTGGA +
Preference number: 2 (lower is better)
Translates to: LHPQCLLTQKCRAADRQRSQVEL*AAHTPG
Trigger: TCCAGGAGTGTGAGCTGCCCAGAGCTCTACCTGAGA...TCGCTGCCGGTCAGCTGCTCGGCACTTCTGCGTCAAGAGGCACTGGGGATGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
3UTR-3UTR CCA 90 bp GCCGCCGTCTGTGAGCTCCACCAGCACTCGCAGCAAGTCAGTCGGGCTGAGAGTCAACTTGCCTGGCCTTaGCCCTTTTGTAGGTGGCCA +
Preference number: 2 (lower is better)
Translates to: AAVCELHQHSQQVSRAESQLAWP*PFCRWP
Trigger: TGGCCACCTACAAAAGGGCCAAGGCCAGGCAAGTTG...ACTCTCAGCCCGACTGACTTGCTGCGAGTGCTGGTGGAGCTCACAGACGGCGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
3UTR-3UTR CCA 90 bp GCCGCCGTCTGTGAGCTCCACCAGCACTCGCAGCAAGTCAGTCGGGCTGAGAGTCACCAAGGTGACACCTaGCTGCTGCTGAAATGGCCT +
Preference number: 2 (lower is better)
Translates to: AAVCELHQHSQQVSRAESHQGDT*LLLKWP
Trigger: AGGCCATTTCAGCAGCAGCCAGGTGTCACCTTGGTG...ACTCTCAGCCCGACTGACTTGCTGCGAGTGCTGGTGGAGCTCACAGACGGCGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
3UTR-3UTR GCA 90 bp GCCGCCGTCTGTGAGCTCCACCAGCACTCGCAGCAAGTCAGTCGGGCTGAGAGTGTGCAGCCCCTGGAATaGTGTACCTTTGCCTTGCTT +
Preference number: 2 (lower is better)
Translates to: AAVCELHQHSQQVSRAESVQPLE*CTFALL
Trigger: AAGCAAGGCAAAGGTACAGCATTCCAGGGGCTGCAC...ACTCTCAGCCCGACTGACTTGCTGCGAGTGCTGGTGGAGCTCACAGACGGCGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
3UTR-3UTR GCA 90 bp CTGCATCCCCAGTGCCTCTTGACGCAGAAGTGCCGAGCAGCTGACCGGCAGCGAAGTTTGGCTCAGCTCTaGATCTCGGGGAAGGTCACA +
Preference number: 2 (lower is better)
Translates to: LHPQCLLTQKCRAADRQRSLAQL*ISGKVT
Trigger: TGTGACCTTCCCCGAGATGCAGAGCTGAGCCAAACT...TCGCTGCCGGTCAGCTGCTCGGCACTTCTGCGTCAAGAGGCACTGGGGATGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
3UTR CAA 90 bp CCTCAACTTGCCTGGCCTTGGCCCTTTTGTAGGTGGCCACCTAGTTaGGCTCAGCTCTGCATCTCGGGGAAGGTCACACAGACCCTCAGC +
Preference number: 2 (lower is better)
Translates to: PQLAWPWPFCRWPPS*AQLCISGKVTQTLS
Trigger: GCTGAGGGTCTGTGTGACCTTCCCCGAGATGCAGAGCTGAGCCAAACTAGGTGGCCACCTACAAAAGGGCCAAGGCCAGGCAAGTTGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
3UTR-3UTR GCA 90 bp TCTGCCTCTGTACAAAAGACCAGCCCATGCCCTGGGGCTGGGTCAATGGCCGGACACCATTACCCAGAGTaGAGGCTATGTCCAGGCTGG +
Preference number: 2 (lower is better)
Translates to: SASVQKTSPCPGAGSMAGHHYPE*RLCPGW
Trigger: CCAGCCTGGACATAGCCTGCACTCTGGGTAATGGTG...TCCGGCCATTGACCCAGCCCCAGGGCATGGGCTGGTCTTTTGTACAGAGGCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
3UTR CAA 90 bp AGTGCCGAGCAGCTGACCGGCAGCGAGGCCTGGAGTTCTACACACTaGCCTTGGAGCCTTTTATTTAGGGCCTCAACTTGCCTGGCCTTG +
Preference number: 2 (lower is better)
Translates to: SAEQLTGSEAWSSTH*PWSLLFRASTCLAL
Trigger: CAAGGCCAGGCAAGTTGAGGCCCTAAATAAAAGGCTCCAAGGCAAGTGTGTAGAACTCCAGGCCTCGCTGCCGGTCAGCTGCTCGGCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
3UTR-3UTR CCA 90 bp GGCTCCTGGGCTGATGTGGTGGCTTCTTCCCTTTGTGCTGCTGAACATAGGGAAGGGCCTCAACTTGCCTaGCCTTGGCCCTTTTGTAGG +
Preference number: 2 (lower is better)
Translates to: GSWADVVASSLCAAEHREGPQLA*PWPFCR
Trigger: CCTACAAAAGGGCCAAGGCCAGGCAAGTTGAGGCCC...TTCCCTATGTTCAGCAGCACAAAGGGAAGAAGCCACCACATCAGCCCAGGAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
3UTR-3UTR GCA 90 bp TTAGGGCCTCAACTTGCCTGGCCTTGGCCCTTTTGTAGGTGGCCACCTAGTTTGCACCATTACCCAGAGTaGAGGCTATGTCCAGGCTGG +
Preference number: 2 (lower is better)
Translates to: LGPQLAWPWPFCRWPPSLHHYPE*RLCPGW
Trigger: CCAGCCTGGACATAGCCTGCACTCTGGGTAATGGTG...CAAACTAGGTGGCCACCTACAAAAGGGCCAAGGCCAGGCAAGTTGAGGCCCTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
3UTR-3UTR CCA 90 bp TTAGGGCCTCAACTTGCCTGGCCTTGGCCCTTTTGTAGGTGGCCACCTAGTTTGTCTCAGGTAGAGCTCTaGGCAGCTCACACTCCTGGA +
Preference number: 2 (lower is better)
Translates to: LGPQLAWPWPFCRWPPSLSQVEL*AAHTPG
Trigger: TCCAGGAGTGTGAGCTGCCCAGAGCTCTACCTGAGA...CAAACTAGGTGGCCACCTACAAAAGGGCCAAGGCCAGGCAAGTTGAGGCCCTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
3UTR-3UTR TCA 90 bp GGCTCCTGGGCTGATGTGGTGGCTTCTTCCCTTTGTGCTGCTGAACATAGGGAAGCAAGTCAGTCGGGCTaGGAGTGTGGTTGTAGAAAC +
Preference number: 2 (lower is better)
Translates to: GSWADVVASSLCAAEHREASQSG*ECGCRN
Trigger: GTTTCTACAACCACACTCTCAGCCCGACTGACTTGC...TTCCCTATGTTCAGCAGCACAAAGGGAAGAAGCCACCACATCAGCCCAGGAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
3UTR-3UTR CCA 90 bp GCGAGGCCTGGAGTTCTACACACTTGCCTTGGAGCCTTTTATTTAGGGCCTCAAGGCAGCTCACACTCCTaGAGGAGTGCACAGCACCAT +
Preference number: 2 (lower is better)
Translates to: ARPGVLHTCLGAFYLGPQGSSHS*RSAQHH
Trigger: ATGGTGCTGTGCACTCCTCCAGGAGTGTGAGCTGCC...TTGAGGCCCTAAATAAAAGGCTCCAAGGCAAGTGTGTAGAACTCCAGGCCTCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
3UTR-3UTR TCA 90 bp TCGATGAGAATGTTCAAGTTAAAGTTCTCCAATGCCATTGCTACAGCAACCTCACCCAGCTCACCAAGGTaGCACCTGGCTGCTGCTGAA +
Preference number: 2 (lower is better)
Translates to: SMRMFKLKFSNAIATATSPSSPR*HLAAAE
Trigger: TTCAGCAGCAGCCAGGTGTCACCTTGGTGAGCTGGG...TGAGGTTGCTGTAGCAATGGCATTGGAGAACTTTAACTTGAACATTCTCATCGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
3UTR-3UTR TCA 90 bp AAGCAATTGCGTTCTTCAGTGAACTCTTTCTTTAGGCCAGTTGATGGCTTCTTATCAGGGCTCCTGGGCTaGTGTGGTGGCTTCTTCCCT +
Preference number: 2 (lower is better)
Translates to: KQLRSSVNSFFRPVDGFLSGLLG*CGGFFP
Trigger: AGGGAAGAAGCCACCACATCAGCCCAGGAGCCCTGA...TAAGAAGCCATCAACTGGCCTAAAGAAAGAGTTCACTGAAGAACGCAATTGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
3UTR-3UTR CCA 90 bp AAGCAATTGCGTTCTTCAGTGAACTCTTTCTTTAGGCCAGTTGATGGCTTCTTAGCTGCTCAGGGCTCCTaGGCTGATGTGGTGGCTTCT +
Preference number: 2 (lower is better)
Translates to: KQLRSSVNSFFRPVDGFLAAQGS*ADVVAS
Trigger: AGAAGCCACCACATCAGCCCAGGAGCCCTGAGCAGC...TAAGAAGCCATCAACTGGCCTAAAGAAAGAGTTCACTGAAGAACGCAATTGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
3UTR-3UTR GCA 90 bp TCGATGAGAATGTTCAAGTTAAAGTTCTCCAATGCCATTGCTACAGCAACCTCAGCTCTGTTGAGGCCGTaGAGCCCCTGGAATGCTGTA +
Preference number: 2 (lower is better)
Translates to: SMRMFKLKFSNAIATATSALLRP*SPWNAV
Trigger: TACAGCATTCCAGGGGCTGCACGGCCTCAACAGAGC...TGAGGTTGCTGTAGCAATGGCATTGGAGAACTTTAACTTGAACATTCTCATCGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
3UTR-3UTR GCA 90 bp TCGATGAGAATGTTCAAGTTAAAGTTCTCCAATGCCATTGCTACAGCAACCTCATGGCCTGAGCAGTCTTaGATTAGCAGGGCCAGCCAC +
Preference number: 2 (lower is better)
Translates to: SMRMFKLKFSNAIATATSWPEQS*ISRASH
Trigger: GTGGCTGGCCCTGCTAATGCAAGACTGCTCAGGCCA...TGAGGTTGCTGTAGCAATGGCATTGGAGAACTTTAACTTGAACATTCTCATCGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
3UTR-3UTR CCA 90 bp AAGCAATTGCGTTCTTCAGTGAACTCTTTCTTTAGGCCAGTTGATGGCTTCTTAAGGCCGTGCAGCCCCTaGAATGCTGTACCTTTGCCT +
Preference number: 2 (lower is better)
Translates to: KQLRSSVNSFFRPVDGFLRPCSP*NAVPLP
Trigger: AGGCAAAGGTACAGCATTCCAGGGGCTGCACGGCCT...TAAGAAGCCATCAACTGGCCTAAAGAAAGAGTTCACTGAAGAACGCAATTGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
3UTR-3UTR CCA 90 bp AAGCAATTGCGTTCTTCAGTGAACTCTTTCTTTAGGCCAGTTGATGGCTTCTTAGGTGGCCACCTAGTTTaGCTCAGCTCTGCATCTCGG +
Preference number: 2 (lower is better)
Translates to: KQLRSSVNSFFRPVDGFLGGHLV*LSSASR
Trigger: CCGAGATGCAGAGCTGAGCCAAACTAGGTGGCCACC...TAAGAAGCCATCAACTGGCCTAAAGAAAGAGTTCACTGAAGAACGCAATTGCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
3UTR-3UTR CCA 90 bp TCGATGAGAATGTTCAAGTTAAAGTTCTCCAATGCCATTGCTACAGCAACCTCATGGCCCTTTTGTAGGTaGCCACCTAGTTTGGCTCAG +
Preference number: 2 (lower is better)
Translates to: SMRMFKLKFSNAIATATSWPFCR*PPSLAQ
Trigger: CTGAGCCAAACTAGGTGGCCACCTACAAAAGGGCCA...TGAGGTTGCTGTAGCAATGGCATTGGAGAACTTTAACTTGAACATTCTCATCGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
3UTR-3UTR TCA 90 bp AAGCAATTGCGTTCTTCAGTGAACTCTTTCTTTAGGCCAGTTGATGGCTTCTTACGAAGCTGGGTTGATTaGTTGCATTTGGGTGCGGAT +
Preference number: 2 (lower is better)
Translates to: KQLRSSVNSFFRPVDGFLRSWVD*LHLGAD
Trigger: ATCCGCACCCAAATGCAATCAATCAACCCAGCTTCG...TAAGAAGCCATCAACTGGCCTAAAGAAAGAGTTCACTGAAGAACGCAATTGCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
3UTR-3UTR GCA 90 bp TCGATGAGAATGTTCAAGTTAAAGTTCTCCAATGCCATTGCTACAGCAACCTCAACCCTAGGTTCTCTCTaGACTATTAACACAGACATC +
Preference number: 2 (lower is better)
Translates to: SMRMFKLKFSNAIATATSTLGSL*TINTDI
Trigger: GATGTCTGTGTTAATAGTGCAGAGAGAACCTAGGGT...TGAGGTTGCTGTAGCAATGGCATTGGAGAACTTTAACTTGAACATTCTCATCGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
3UTR TCA 72 bp AGCCACCTGCCAGCCTGCTGCATCCCCAGTGCCTCTTaGCGCAGAAGTGCCGAGCAGCTGACCGGCAGCGAG +
Preference number: 3 (lower is better)
Translates to: SHLPACCIPSAS*RRSAEQLTGSE
Trigger: CTCGCTGCCGGTCAGCTGCTCGGCACTTCTGCGTCAAGAGGCACTGGGGATGCAGCAGGCTGGCAGGTGGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
3UTR GCA 72 bp AGCCTGCTGCATCCCCAGTGCCTCTTGACGCAGAAGTaGCGAGCAGCTGACCGGCAGCGAGGCCTGGAGTTC +
Preference number: 3 (lower is better)
Translates to: SLLHPQCLLTQK*RAADRQRGLEF
Trigger: GAACTCCAGGCCTCGCTGCCGGTCAGCTGCTCGGCACTTCTGCGTCAAGAGGCACTGGGGATGCAGCAGGCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
3UTR-3UTR CAA 90 bp GCCGCCGTCTGTGAGCTCCACCAGCACTCGCAGCAAGTCAGTCGGGCTGAGAGTAGGTGGCCACCTAGTTaGGCTCAGCTCTGCATCTCG +
Preference number: 3 (lower is better)
Translates to: AAVCELHQHSQQVSRAESRWPPS*AQLCIS
Trigger: CGAGATGCAGAGCTGAGCCAAACTAGGTGGCCACCT...ACTCTCAGCCCGACTGACTTGCTGCGAGTGCTGGTGGAGCTCACAGACGGCGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
3UTR TCA 72 bp TCCCCAGTGCCTCTTGACGCAGAAGTGCCGAGCAGCTaGCCGGCAGCGAGGCCTGGAGTTCTACACACTTGC +
Preference number: 3 (lower is better)
Translates to: SPVPLDAEVPSS*PAARPGVLHTC
Trigger: GCAAGTGTGTAGAACTCCAGGCCTCGCTGCCGGTCAGCTGCTCGGCACTTCTGCGTCAAGAGGCACTGGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
3UTR CCA 72 bp GGGCCTCAACTTGCCTGGCCTTGGCCCTTTTGTAGGTaGCCACCTAGTTTGGCTCAGCTCTGCATCTCGGGG +
Preference number: 3 (lower is better)
Translates to: GPQLAWPWPFCR*PPSLAQLCISG
Trigger: CCCCGAGATGCAGAGCTGAGCCAAACTAGGTGGCCACCTACAAAAGGGCCAAGGCCAGGCAAGTTGAGGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
3UTR CCA 72 bp CCAGCTCACCAAGGTGACACCTGGCTGCTGCTGAAATaGCCTGAGCAGTCTTGCATTAGCAGGGCCAGCCAC +
Preference number: 3 (lower is better)
Translates to: PAHQGDTWLLLK*PEQSCISRASH
Trigger: GTGGCTGGCCCTGCTAATGCAAGACTGCTCAGGCCATTTCAGCAGCAGCCAGGTGTCACCTTGGTGAGCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
3UTR GCA 72 bp CCCTTTTGTAGGTGGCCACCTAGTTTGGCTCAGCTCTaGATCTCGGGGAAGGTCACACAGACCCTCAGCCAG +
Preference number: 3 (lower is better)
Translates to: PFCRWPPSLAQL*ISGKVTQTLSQ
Trigger: CTGGCTGAGGGTCTGTGTGACCTTCCCCGAGATGCAGAGCTGAGCCAAACTAGGTGGCCACCTACAAAAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
3UTR CCA 72 bp CCTGGCCTTGGCCCTTTTGTAGGTGGCCACCTAGTTTaGCTCAGCTCTGCATCTCGGGGAAGGTCACACAGA +
Preference number: 3 (lower is better)
Translates to: PGLGPFVGGHLV*LSSASRGRSHR
Trigger: TCTGTGTGACCTTCCCCGAGATGCAGAGCTGAGCCAAACTAGGTGGCCACCTACAAAAGGGCCAAGGCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
3UTR CCA 72 bp CTACTGCCTGTGCTGCTCAGGGCTCCTGGGCTGATGTaGTGGCTTCTTCCCTTTGTGCTGCTGAACATAGGG +
Preference number: 3 (lower is better)
Translates to: LLPVLLRAPGLM*WLLPFVLLNIG
Trigger: CCCTATGTTCAGCAGCACAAAGGGAAGAAGCCACCACATCAGCCCAGGAGCCCTGAGCAGCACAGGCAGTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
3UTR CCA 72 bp ACCGGCAGCGAGGCCTGGAGTTCTACACACTTGCCTTaGAGCCTTTTATTTAGGGCCTCAACTTGCCTGGCC +
Preference number: 3 (lower is better)
Translates to: TGSEAWSSTHLP*SLLFRASTCLA
Trigger: GGCCAGGCAAGTTGAGGCCCTAAATAAAAGGCTCCAAGGCAAGTGTGTAGAACTCCAGGCCTCGCTGCCGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
3UTR CCA 72 bp CGCAGAAGTGCCGAGCAGCTGACCGGCAGCGAGGCCTaGAGTTCTACACACTTGCCTTGGAGCCTTTTATTT +
Preference number: 3 (lower is better)
Translates to: RRSAEQLTGSEA*SSTHLPWSLLF
Trigger: AAATAAAAGGCTCCAAGGCAAGTGTGTAGAACTCCAGGCCTCGCTGCCGGTCAGCTGCTCGGCACTTCTGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
3UTR CCA 72 bp CTGCCTGTGCTGCTCAGGGCTCCTGGGCTGATGTGGTaGCTTCTTCCCTTTGTGCTGCTGAACATAGGGAAA +
Preference number: 3 (lower is better)
Translates to: LPVLLRAPGLMW*LLPFVLLNIGK
Trigger: TTTCCCTATGTTCAGCAGCACAAAGGGAAGAAGCCACCACATCAGCCCAGGAGCCCTGAGCAGCACAGGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
3UTR-3UTR CAA 90 bp GCGAGGCCTGGAGTTCTACACACTTGCCTTGGAGCCTTTTATTTAGGGCCTCAAACCCTCAGCCAGAAGTaGAGCGCTCTGTTGAGGCCG +
Preference number: 3 (lower is better)
Translates to: ARPGVLHTCLGAFYLGPQTLSQK*SALLRP
Trigger: CGGCCTCAACAGAGCGCTCAACTTCTGGCTGAGGGT...TTGAGGCCCTAAATAAAAGGCTCCAAGGCAAGTGTGTAGAACTCCAGGCCTCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
3UTR CCA 72 bp AGGGTAGCTTCCGAAGCTGGGTTGATTGATTGCATTTaGGTGCGGATGGCCAAAGTGAGTGGCCCTACTGCC +
Preference number: 3 (lower is better)
Translates to: RVASEAGLIDCI*VRMAKVSGPTA
Trigger: GGCAGTAGGGCCACTCACTTTGGCCATCCGCACCCAAATGCAATCAATCAACCCAGCTTCGGAAGCTACCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
3UTR GCA 72 bp GATCCTAGGGTAGCTTCCGAAGCTGGGTTGATTGATTaGATTTGGGTGCGGATGGCCAAAGTGAGTGGCCCT +
Preference number: 3 (lower is better)
Translates to: DPRVASEAGLID*IWVRMAKVSGP
Trigger: AGGGCCACTCACTTTGGCCATCCGCACCCAAATGCAATCAATCAACCCAGCTTCGGAAGCTACCCTAGGATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
3UTR CCA 72 bp GGAGCCTTTTATTTAGGGCCTCAACTTGCCTGGCCTTaGCCCTTTTGTAGGTGGCCACCTAGTTTGGCTCAG +
Preference number: 3 (lower is better)
Translates to: GAFYLGPQLAWP*PFCRWPPSLAQ
Trigger: CTGAGCCAAACTAGGTGGCCACCTACAAAAGGGCCAAGGCCAGGCAAGTTGAGGCCCTAAATAAAAGGCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
3UTR-3UTR CAA 90 bp TCGATGAGAATGTTCAAGTTAAAGTTCTCCAATGCCATTGCTACAGCAACCTCAACCCTCAGCCAGAAGTaGAGCGCTCTGTTGAGGCCG +
Preference number: 3 (lower is better)
Translates to: SMRMFKLKFSNAIATATSTLSQK*SALLRP
Trigger: CGGCCTCAACAGAGCGCTCAACTTCTGGCTGAGGGT...TGAGGTTGCTGTAGCAATGGCATTGGAGAACTTTAACTTGAACATTCTCATCGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
3UTR TCA 72 bp TTCTTTAGGCCAGTTGATGGCTTCTTAGCAGTTTATTaGCGAGATCCTAGGGTAGCTTCCGAAGCTGGGTTG +
Preference number: 3 (lower is better)
Translates to: FFRPVDGFLAVY*RDPRVASEAGL
Trigger: CAACCCAGCTTCGGAAGCTACCCTAGGATCTCGTCAATAAACTGCTAAGAAGCCATCAACTGGCCTAAAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
3UTR GCA 72 bp CCATTGCTACAGCAACCTCAAACCCTAGGTTCTCTCTaGACTATTAACACAGACATCTCAGGACATGGTTTG +
Preference number: 3 (lower is better)
Translates to: PLLQQPQTLGSL*TINTDISGHGL
Trigger: CAAACCATGTCCTGAGATGTCTGTGTTAATAGTGCAGAGAGAACCTAGGGTTTGAGGTTGCTGTAGCAATGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
3UTR-3UTR CAA 90 bp AAGCAATTGCGTTCTTCAGTGAACTCTTTCTTTAGGCCAGTTGATGGCTTCTTATGGAGTTCTACACACTaGCCTTGGAGCCTTTTATTT +
Preference number: 3 (lower is better)
Translates to: KQLRSSVNSFFRPVDGFLWSSTH*PWSLLF
Trigger: AAATAAAAGGCTCCAAGGCAAGTGTGTAGAACTCCA...TAAGAAGCCATCAACTGGCCTAAAGAAAGAGTTCACTGAAGAACGCAATTGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR GCA 90 bp GCCGCCGTCTGTGAGCTCCACCAGCACTCGCAGCAAGTCAGTCGGGCTGAGAGTCGAAGGCCCGCTGCATaGTGGAGGCGCCGTCGCGCA +
Preference number: 4 (lower is better)
Translates to: AAVCELHQHSQQVSRAESRRPAA*WRRRRA
Trigger: TGCGCGACGGCGCCTCCAGCATGCAGCGGGCCTTCG...ACTCTCAGCCCGACTGACTTGCTGCGAGTGCTGGTGGAGCTCACAGACGGCGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR GCA 90 bp CTGCATCCCCAGTGCCTCTTGACGCAGAAGTGCCGAGCAGCTGACCGGCAGCGACGAAGGCCCGCTGCATaGTGGAGGCGCCGTCGCGCA +
Preference number: 4 (lower is better)
Translates to: LHPQCLLTQKCRAADRQRRRPAA*WRRRRA
Trigger: TGCGCGACGGCGCCTCCAGCATGCAGCGGGCCTTCG...TCGCTGCCGGTCAGCTGCTCGGCACTTCTGCGTCAAGAGGCACTGGGGATGCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR GCA 90 bp CTGCATCCCCAGTGCCTCTTGACGCAGAAGTGCCGAGCAGCTGACCGGCAGCGACTGCGGCCCAGCTCCTaGAGGCTCTCTCGGGCTGCG +
Preference number: 4 (lower is better)
Translates to: LHPQCLLTQKCRAADRQRLRPSS*RLSRAA
Trigger: CGCAGCCCGAGAGAGCCTGCAGGAGCTGGGCCGCAG...TCGCTGCCGGTCAGCTGCTCGGCACTTCTGCGTCAAGAGGCACTGGGGATGCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR CCA 90 bp CTGCATCCCCAGTGCCTCTTGACGCAGAAGTGCCGAGCAGCTGACCGGCAGCGAGGCAGAGGCTGGAGCTaGCCCAGCCGCTTCCCCTGC +
Preference number: 4 (lower is better)
Translates to: LHPQCLLTQKCRAADRQRGRGWS*PSRFPC
Trigger: GCAGGGGAAGCGGCTGGGCCAGCTCCAGCCTCTGCC...TCGCTGCCGGTCAGCTGCTCGGCACTTCTGCGTCAAGAGGCACTGGGGATGCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR CCA 90 bp CAGTGCCTCTTGACGCAGAAGTGCCGAGCAGCTGACCGGCAGCGAGGCCTGGAGGTCTGGGGCAGAGGCTaGAGCTGGCCCAGCCGCTTC +
Preference number: 4 (lower is better)
Translates to: QCLLTQKCRAADRQRGLEVWGRG*SWPSRF
Trigger: GAAGCGGCTGGGCCAGCTCCAGCCTCTGCCCCAGAC...CTCCAGGCCTCGCTGCCGGTCAGCTGCTCGGCACTTCTGCGTCAAGAGGCACTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR CCA 90 bp CAGTGCCTCTTGACGCAGAAGTGCCGAGCAGCTGACCGGCAGCGAGGCCTGGAGGACCAGCCCATGCCCTaGGGCTGGGTCAATGGCCGG +
Preference number: 4 (lower is better)
Translates to: QCLLTQKCRAADRQRGLEDQPMP*GWVNGR
Trigger: CCGGCCATTGACCCAGCCCCAGGGCATGGGCTGGTC...CTCCAGGCCTCGCTGCCGGTCAGCTGCTCGGCACTTCTGCGTCAAGAGGCACTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR GCA 90 bp CCTCTGTACAAAAGACCAGCCCATGCCCTGGGGCTGGGTCAATGGCCGGAGTCTCGGGCGAAGGCCCGCTaGATGCTGGAGGCGCCGTCG +
Preference number: 4 (lower is better)
Translates to: PLYKRPAHALGLGQWPESRAKAR*MLEAPS
Trigger: CGACGGCGCCTCCAGCATGCAGCGGGCCTTCGCCCG...AGACTCCGGCCATTGACCCAGCCCCAGGGCATGGGCTGGTCTTTTGTACAGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR GCA 90 bp CAGTGCCTCTTGACGCAGAAGTGCCGAGCAGCTGACCGGCAGCGAGGCCTGGAGGCCGAGGTGTGCTCCTaGCGTGCTCTGCAGGGCTTC +
Preference number: 4 (lower is better)
Translates to: QCLLTQKCRAADRQRGLEAEVCS*RALQGF
Trigger: GAAGCCCTGCAGAGCACGGCAGGAGCACACCTCGGC...CTCCAGGCCTCGCTGCCGGTCAGCTGCTCGGCACTTCTGCGTCAAGAGGCACTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR CCA 90 bp TGGGCAGCTCACACTCCTGGAGGAGTGCACAGCACCATTACCCAGAGTGCAGGCAGGCCCGCTGCATGCTaGAGGCGCCGTCGCGCAGGC +
Preference number: 4 (lower is better)
Translates to: WAAHTPGGVHSTITQSAGRPAAC*RRRRAG
Trigger: GCCTGCGCGACGGCGCCTCCAGCATGCAGCGGGCCT...GCCTGCACTCTGGGTAATGGTGCTGTGCACTCCTCCAGGAGTGTGAGCTGCCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR CCA 90 bp CCTCTGTACAAAAGACCAGCCCATGCCCTGGGGCTGGGTCAATGGCCGGAGTCTAGGCCCGCTGCATGCTaGAGGCGCCGTCGCGCAGGC +
Preference number: 4 (lower is better)
Translates to: PLYKRPAHALGLGQWPESRPAAC*RRRRAG
Trigger: GCCTGCGCGACGGCGCCTCCAGCATGCAGCGGGCCT...AGACTCCGGCCATTGACCCAGCCCCAGGGCATGGGCTGGTCTTTTGTACAGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR CCA 90 bp CAGTGCCTCTTGACGCAGAAGTGCCGAGCAGCTGACCGGCAGCGAGGCCTGGAGCGGAAGCCGAGGACCTaGTACTCCAGCTCCCGGAGC +
Preference number: 4 (lower is better)
Translates to: QCLLTQKCRAADRQRGLERKPRT*YSSSRS
Trigger: GCTCCGGGAGCTGGAGTACCAGGTCCTCGGCTTCCG...CTCCAGGCCTCGCTGCCGGTCAGCTGCTCGGCACTTCTGCGTCAAGAGGCACTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR CCA 90 bp TGGGCAGCTCACACTCCTGGAGGAGTGCACAGCACCATTACCCAGAGTGCAGGCCAGCCAGGCGAGCGCTaGCCGCCCTGCACACCCTCG +
Preference number: 4 (lower is better)
Translates to: WAAHTPGGVHSTITQSAGQPGER*PPCTPS
Trigger: CGAGGGTGTGCAGGGCGGCCAGCGCTCGCCTGGCTG...GCCTGCACTCTGGGTAATGGTGCTGTGCACTCCTCCAGGAGTGTGAGCTGCCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR CCA 90 bp CAGTGCCTCTTGACGCAGAAGTGCCGAGCAGCTGACCGGCAGCGAGGCCTGGAGGGGTGCAGGCGGCCATaGAGCTGGGGTTCCAGGAAG +
Preference number: 4 (lower is better)
Translates to: QCLLTQKCRAADRQRGLEGCRRP*SWGSRK
Trigger: CTTCCTGGAACCCCAGCTCCATGGCCGCCTGCACCC...CTCCAGGCCTCGCTGCCGGTCAGCTGCTCGGCACTTCTGCGTCAAGAGGCACTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327979.8
CDS-3UTR CCA 90 bp CAGTGCCTCTTGACGCAGAAGTGCCGAGCAGCTGACCGGCAGCGAGGCCTGGAGCTGGCCACCAGCCGCTaGTCCCGCTCTCTGGGAAGA +
Preference number: 4 (lower is better)
Translates to: QCLLTQKCRAADRQRGLELATSR*SRSLGR
Trigger: TCTTCCCAGAGAGCGGGACCAGCGGCTGGTGGCCAG...CTCCAGGCCTCGCTGCCGGTCAGCTGCTCGGCACTTCTGCGTCAAGAGGCACTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327979.8
CDS-3UTR GCA 90 bp GCCGCCGTCTGTGAGCTCCACCAGCACTCGCAGCAAGTCAGTCGGGCTGAGAGTTGCACTGCTGAAGCCTaGGAAGGAGGCGCTCCGGCC +
Preference number: 4 (lower is better)
Translates to: AAVCELHQHSQQVSRAESCTAEA*EGGAPA
Trigger: GGCCGGAGCGCCTCCTTCGCAGGCTTCAGCAGTGCA...ACTCTCAGCCCGACTGACTTGCTGCGAGTGCTGGTGGAGCTCACAGACGGCGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR GCA 90 bp GTGCACAGCACCATTACCCAGAGTGCAGGCTATGTCCAGGCTGGGCAGCAGCAACGGGCGAAGGCCCGCTaGATGCTGGAGGCGCCGTCG +
Preference number: 4 (lower is better)
Translates to: VHSTITQSAGYVQAGQQQRAKAR*MLEAPS
Trigger: CGACGGCGCCTCCAGCATGCAGCGGGCCTTCGCCCG...TTGCTGCTGCCCAGCCTGGACATAGCCTGCACTCTGGGTAATGGTGCTGTGCAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR GCA 90 bp TCTGCCTCTGTACAAAAGACCAGCCCATGCCCTGGGGCTGGGTCAATGGCCGGACTGCGGCCCAGCTCCTaGAGGCTCTCTCGGGCTGCG +
Preference number: 4 (lower is better)
Translates to: SASVQKTSPCPGAGSMAGLRPSS*RLSRAA
Trigger: CGCAGCCCGAGAGAGCCTGCAGGAGCTGGGCCGCAG...TCCGGCCATTGACCCAGCCCCAGGGCATGGGCTGGTCTTTTGTACAGAGGCAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR GCA 90 bp CTGCATCCCCAGTGCCTCTTGACGCAGAAGTGCCGAGCAGCTGACCGGCAGCGACCCGGAAGCTGGGGGTaGTCGGGGGTGTCCAGTTGT +
Preference number: 4 (lower is better)
Translates to: LHPQCLLTQKCRAADRQRPGSWG*SGVSSC
Trigger: ACAACTGGACACCCCCGAGCACCCCCAGCTTCCGGG...TCGCTGCCGGTCAGCTGCTCGGCACTTCTGCGTCAAGAGGCACTGGGGATGCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR GCA 90 bp CTGCATCCCCAGTGCCTCTTGACGCAGAAGTGCCGAGCAGCTGACCGGCAGCGACTCTCGGCCGAGGTGTaGTCCTGCCGTGCTCTGCAG +
Preference number: 4 (lower is better)
Translates to: LHPQCLLTQKCRAADRQRLSAEV*SCRALQ
Trigger: CTGCAGAGCACGGCAGGAGCACACCTCGGCCGAGAG...TCGCTGCCGGTCAGCTGCTCGGCACTTCTGCGTCAAGAGGCACTGGGGATGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR GCA 90 bp GCCGCCGTCTGTGAGCTCCACCAGCACTCGCAGCAAGTCAGTCGGGCTGAGAGTCTCTCGGCCGAGGTGTaGTCCTGCCGTGCTCTGCAG +
Preference number: 4 (lower is better)
Translates to: AAVCELHQHSQQVSRAESLSAEV*SCRALQ
Trigger: CTGCAGAGCACGGCAGGAGCACACCTCGGCCGAGAG...ACTCTCAGCCCGACTGACTTGCTGCGAGTGCTGGTGGAGCTCACAGACGGCGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR GCA 90 bp TGGGCAGCTCACACTCCTGGAGGAGTGCACAGCACCATTACCCAGAGTGCAGGCGAGCGCTGGCCGCCCTaGACACCCTCGGAGTGCCGT +
Preference number: 4 (lower is better)
Translates to: WAAHTPGGVHSTITQSAGERWPP*TPSECR
Trigger: ACGGCACTCCGAGGGTGTGCAGGGCGGCCAGCGCTC...GCCTGCACTCTGGGTAATGGTGCTGTGCACTCCTCCAGGAGTGTGAGCTGCCCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR GCA 90 bp CTGCATCCCCAGTGCCTCTTGACGCAGAAGTGCCGAGCAGCTGACCGGCAGCGAGGCCTGCTGGAGCCTTaGGTCGTTCTCTGCCAGGGC +
Preference number: 4 (lower is better)
Translates to: LHPQCLLTQKCRAADRQRGLLEP*VVLCQG
Trigger: GCCCTGGCAGAGAACGACGCAAGGCTCCAGCAGGCC...TCGCTGCCGGTCAGCTGCTCGGCACTTCTGCGTCAAGAGGCACTGGGGATGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR GCA 90 bp GCCGCCGTCTGTGAGCTCCACCAGCACTCGCAGCAAGTCAGTCGGGCTGAGAGTGGGAGGCCGGTGCCCTaGCGGGCTCTGATAATGCAG +
Preference number: 4 (lower is better)
Translates to: AAVCELHQHSQQVSRAESGRPVP*RALIMQ
Trigger: CTGCATTATCAGAGCCCGGCAGGGCACCGGCCTCCC...ACTCTCAGCCCGACTGACTTGCTGCGAGTGCTGGTGGAGCTCACAGACGGCGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327979.8
CDS-3UTR CCA 90 bp GCCGCCGTCTGTGAGCTCCACCAGCACTCGCAGCAAGTCAGTCGGGCTGAGAGTCACTGGGGACTGTCCTaGGCCTCCGTCCCCAAGGTG +
Preference number: 4 (lower is better)
Translates to: AAVCELHQHSQQVSRAESHWGLS*ASVPKV
Trigger: CACCTTGGGGACGGAGGCCCAGGACAGTCCCCAGTG...ACTCTCAGCCCGACTGACTTGCTGCGAGTGCTGGTGGAGCTCACAGACGGCGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000045083.6
CDS-3UTR CCA 90 bp AAAAGACCAGCCCATGCCCTGGGGCTGGGTCAATGGCCGGAGTCTCAGGTAGAGCTCTGGCAGGAGACCTaGGGGCAGGGGGTCCTCCCG +
Preference number: 4 (lower is better)
Translates to: KRPAHALGLGQWPESQVELWQET*GQGVLP
Trigger: CGGGAGGACCCCCTGCCCCCAGGTCTCCTGCCAGAG...CTCTACCTGAGACTCCGGCCATTGACCCAGCCCCAGGGCATGGGCTGGTCTTTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR CCA 90 bp CTGCATCCCCAGTGCCTCTTGACGCAGAAGTGCCGAGCAGCTGACCGGCAGCGAGAGGCTGTGCCGCTGTaGAACAGGGAGCCCTGTGGC +
Preference number: 4 (lower is better)
Translates to: LHPQCLLTQKCRAADRQREAVPL*NREPCG
Trigger: GCCACAGGGCTCCCTGTTCCACAGCGGCACAGCCTC...TCGCTGCCGGTCAGCTGCTCGGCACTTCTGCGTCAAGAGGCACTGGGGATGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR CCA 90 bp CAGTGCCTCTTGACGCAGAAGTGCCGAGCAGCTGACCGGCAGCGAGGCCTGGAGCAGCACGTCCAGCTCTaGGGCACCGGCTGTGAGTTC +
Preference number: 4 (lower is better)
Translates to: QCLLTQKCRAADRQRGLEQHVQL*GTGCEF
Trigger: GAACTCACAGCCGGTGCCCCAGAGCTGGACGTGCTG...CTCCAGGCCTCGCTGCCGGTCAGCTGCTCGGCACTTCTGCGTCAAGAGGCACTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR CCA 90 bp TGGGCAGCTCACACTCCTGGAGGAGTGCACAGCACCATTACCCAGAGTGCAGGCGGCAGAGGCTGGAGCTaGCCCAGCCGCTTCCCCTGC +
Preference number: 4 (lower is better)
Translates to: WAAHTPGGVHSTITQSAGGRGWS*PSRFPC
Trigger: GCAGGGGAAGCGGCTGGGCCAGCTCCAGCCTCTGCC...GCCTGCACTCTGGGTAATGGTGCTGTGCACTCCTCCAGGAGTGTGAGCTGCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR CCA 90 bp CTGCATCCCCAGTGCCTCTTGACGCAGAAGTGCCGAGCAGCTGACCGGCAGCGACACCGAACGACAGTGTaGTTTCCCGGGCTGCCGCCC +
Preference number: 4 (lower is better)
Translates to: LHPQCLLTQKCRAADRQRHRTTV*FPGLPP
Trigger: GGGCGGCAGCCCGGGAAACCACACTGTCGTTCGGTG...TCGCTGCCGGTCAGCTGCTCGGCACTTCTGCGTCAAGAGGCACTGGGGATGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR CCA 90 bp GCCGCCGTCTGTGAGCTCCACCAGCACTCGCAGCAAGTCAGTCGGGCTGAGAGTCACCGAACGACAGTGTaGTTTCCCGGGCTGCCGCCC +
Preference number: 4 (lower is better)
Translates to: AAVCELHQHSQQVSRAESHRTTV*FPGLPP
Trigger: GGGCGGCAGCCCGGGAAACCACACTGTCGTTCGGTG...ACTCTCAGCCCGACTGACTTGCTGCGAGTGCTGGTGGAGCTCACAGACGGCGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR CCA 90 bp CTGCATCCCCAGTGCCTCTTGACGCAGAAGTGCCGAGCAGCTGACCGGCAGCGACCCATGCCCTGGGGCTaGGTCAATGGCCGGAGTCTC +
Preference number: 4 (lower is better)
Translates to: LHPQCLLTQKCRAADRQRPMPWG*VNGRSL
Trigger: GAGACTCCGGCCATTGACCCAGCCCCAGGGCATGGG...TCGCTGCCGGTCAGCTGCTCGGCACTTCTGCGTCAAGAGGCACTGGGGATGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR TCA 90 bp GCCGCCGTCTGTGAGCTCCACCAGCACTCGCAGCAAGTCAGTCGGGCTGAGAGTACTCGATCCGACCCTTaGGCTTCCAACGCTGGCGGC +
Preference number: 4 (lower is better)
Translates to: AAVCELHQHSQQVSRAESTRSDP*ASNAGG
Trigger: GCCGCCAGCGTTGGAAGCTCAAGGGTCGGATCGAGT...ACTCTCAGCCCGACTGACTTGCTGCGAGTGCTGGTGGAGCTCACAGACGGCGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR TCA 90 bp CCTCTGTACAAAAGACCAGCCCATGCCCTGGGGCTGGGTCAATGGCCGGAGTCTGAAGTGCCGAGCAGCTaGCCGGCAGCGAGGCCTGGA +
Preference number: 4 (lower is better)
Translates to: PLYKRPAHALGLGQWPESEVPSS*PAARPG
Trigger: TCCAGGCCTCGCTGCCGGTCAGCTGCTCGGCACTTC...AGACTCCGGCCATTGACCCAGCCCCAGGGCATGGGCTGGTCTTTTGTACAGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR TCA 90 bp TGGGCAGCTCACACTCCTGGAGGAGTGCACAGCACCATTACCCAGAGTGCAGGCGAAGTGCCGAGCAGCTaGCCGGCAGCGAGGCCTGGA +
Preference number: 4 (lower is better)
Translates to: WAAHTPGGVHSTITQSAGEVPSS*PAARPG
Trigger: TCCAGGCCTCGCTGCCGGTCAGCTGCTCGGCACTTC...GCCTGCACTCTGGGTAATGGTGCTGTGCACTCCTCCAGGAGTGTGAGCTGCCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR GCA 90 bp CAGTGCCTCTTGACGCAGAAGTGCCGAGCAGCTGACCGGCAGCGAGGCCTGGAGCCCAGCAGCAAGGCCTaGTGTGTTGGCTGCTGTAGG +
Preference number: 4 (lower is better)
Translates to: QCLLTQKCRAADRQRGLEPSSKA*CVGCCR
Trigger: CCTACAGCAGCCAACACAGCAGGCCTTGCTGCTGGG...CTCCAGGCCTCGCTGCCGGTCAGCTGCTCGGCACTTCTGCGTCAAGAGGCACTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR GCA 90 bp TGGGCAGCTCACACTCCTGGAGGAGTGCACAGCACCATTACCCAGAGTGCAGGCGCTCCTGCCGTGCTCTaGAGGGCTTCAGCCGGTCCC +
Preference number: 4 (lower is better)
Translates to: WAAHTPGGVHSTITQSAGAPAVL*RASAGP
Trigger: GGGACCGGCTGAAGCCCTGCAGAGCACGGCAGGAGC...GCCTGCACTCTGGGTAATGGTGCTGTGCACTCCTCCAGGAGTGTGAGCTGCCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR GCA 90 bp CCTCTGTACAAAAGACCAGCCCATGCCCTGGGGCTGGGTCAATGGCCGGAGTCTCCGGATGCCGCCTGCTaGTCTGGACGCGGCCGATTG +
Preference number: 4 (lower is better)
Translates to: PLYKRPAHALGLGQWPESPDAAC*SGRGRL
Trigger: CAATCGGCCGCGTCCAGAGCAGCAGGCGGCATCCGG...AGACTCCGGCCATTGACCCAGCCCCAGGGCATGGGCTGGTCTTTTGTACAGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327979.8
CDS-3UTR CCA 90 bp CAGTGCCTCTTGACGCAGAAGTGCCGAGCAGCTGACCGGCAGCGAGGCCTGGAGTTGAGCTTCCAACGCTaGCGGCCCAGACGCATGAGC +
Preference number: 4 (lower is better)
Translates to: QCLLTQKCRAADRQRGLELSFQR*RPRRMS
Trigger: GCTCATGCGTCTGGGCCGCCAGCGTTGGAAGCTCAA...CTCCAGGCCTCGCTGCCGGTCAGCTGCTCGGCACTTCTGCGTCAAGAGGCACTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR CCA 90 bp GCCGCCGTCTGTGAGCTCCACCAGCACTCGCAGCAAGTCAGTCGGGCTGAGAGTGGGCCTCCAGAGAGGTaGGCCATCTCTGGCAGGAGA +
Preference number: 4 (lower is better)
Translates to: AAVCELHQHSQQVSRAESGPPER*AISGRR
Trigger: TCTCCTGCCAGAGATGGCCCACCTCTCTGGAGGCCC...ACTCTCAGCCCGACTGACTTGCTGCGAGTGCTGGTGGAGCTCACAGACGGCGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR CCA 90 bp GCCGCCGTCTGTGAGCTCCACCAGCACTCGCAGCAAGTCAGTCGGGCTGAGAGTGCTGGGTGGAGTCCGTaGGCCTCAGCAACTCCAGGA +
Preference number: 4 (lower is better)
Translates to: AAVCELHQHSQQVSRAESAGWSP*ASATPG
Trigger: TCCTGGAGTTGCTGAGGCCCACGGACTCCACCCAGC...ACTCTCAGCCCGACTGACTTGCTGCGAGTGCTGGTGGAGCTCACAGACGGCGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR CCA 90 bp CTGCATCCCCAGTGCCTCTTGACGCAGAAGTGCCGAGCAGCTGACCGGCAGCGATGCCGCCTGCTGCTCTaGACGCGGCCGATTGCTTGT +
Preference number: 4 (lower is better)
Translates to: LHPQCLLTQKCRAADRQRCRLLL*TRPIAC
Trigger: ACAAGCAATCGGCCGCGTCCAGAGCAGCAGGCGGCA...TCGCTGCCGGTCAGCTGCTCGGCACTTCTGCGTCAAGAGGCACTGGGGATGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327979.8
CDS-3UTR TCA 90 bp TGGGCAGCTCACACTCCTGGAGGAGTGCACAGCACCATTACCCAGAGTGCAGGCGGCTCTGTGCACTGCTaGAGCCTGCGAAGGAGGCGC +
Preference number: 4 (lower is better)
Translates to: WAAHTPGGVHSTITQSAGGSVHC*SLRRRR
Trigger: GCGCCTCCTTCGCAGGCTTCAGCAGTGCACAGAGCC...GCCTGCACTCTGGGTAATGGTGCTGTGCACTCCTCCAGGAGTGTGAGCTGCCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR TCA 90 bp GTGCACAGCACCATTACCCAGAGTGCAGGCTATGTCCAGGCTGGGCAGCAGCAATGGAACTCGCCCAGGTaGACCTCCAGGGCCCCCTCG +
Preference number: 4 (lower is better)
Translates to: VHSTITQSAGYVQAGQQQWNSPR*TSRAPS
Trigger: CGAGGGGGCCCTGGAGGTTCACCTGGGCGAGTTCCA...TTGCTGCTGCCCAGCCTGGACATAGCCTGCACTCTGGGTAATGGTGCTGTGCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR TCA 90 bp AAAAGACCAGCCCATGCCCTGGGGCTGGGTCAATGGCCGGAGTCTCAGGTAGAGCCTGCGGCCGCGTCGTaGAGAAGTCGGCGATGTCAC +
Preference number: 4 (lower is better)
Translates to: KRPAHALGLGQWPESQVEPAAAS*RSRRCH
Trigger: GTGACATCGCCGACTTCTTCACGACGCGGCCGCAGG...CTCTACCTGAGACTCCGGCCATTGACCCAGCCCCAGGGCATGGGCTGGTCTTTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR TCA 90 bp CCTCTGTACAAAAGACCAGCCCATGCCCTGGGGCTGGGTCAATGGCCGGAGTCTCCTGCGGCCGCGTCGTaGAGAAGTCGGCGATGTCAC +
Preference number: 4 (lower is better)
Translates to: PLYKRPAHALGLGQWPESPAAAS*RSRRCH
Trigger: GTGACATCGCCGACTTCTTCACGACGCGGCCGCAGG...AGACTCCGGCCATTGACCCAGCCCCAGGGCATGGGCTGGTCTTTTGTACAGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR TCA 90 bp CTGCATCCCCAGTGCCTCTTGACGCAGAAGTGCCGAGCAGCTGACCGGCAGCGAGGGGGTCCTCAGAGCTaGAGGAGTCCATCTCAGGCA +
Preference number: 4 (lower is better)
Translates to: LHPQCLLTQKCRAADRQRGGPQS*RSPSQA
Trigger: TGCCTGAGATGGACTCCTTCAGCTCTGAGGACCCCC...TCGCTGCCGGTCAGCTGCTCGGCACTTCTGCGTCAAGAGGCACTGGGGATGCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR TCA 90 bp GCCGCCGTCTGTGAGCTCCACCAGCACTCGCAGCAAGTCAGTCGGGCTGAGAGTGGAAGCTTCTGTTCCTaGCTGCACCAGCCAGGCGAG +
Preference number: 4 (lower is better)
Translates to: AAVCELHQHSQQVSRAESGSFCS*LHQPGE
Trigger: CTCGCCTGGCTGGTGCAGTCAGGAACAGAAGCTTCC...ACTCTCAGCCCGACTGACTTGCTGCGAGTGCTGGTGGAGCTCACAGACGGCGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR TCA 90 bp CTGCATCCCCAGTGCCTCTTGACGCAGAAGTGCCGAGCAGCTGACCGGCAGCGACCCAGCTCACCAAGGTaGCACCTGGCTGCTGCTGAA +
Preference number: 4 (lower is better)
Translates to: LHPQCLLTQKCRAADRQRPSSPR*HLAAAE
Trigger: TTCAGCAGCAGCCAGGTGTCACCTTGGTGAGCTGGG...TCGCTGCCGGTCAGCTGCTCGGCACTTCTGCGTCAAGAGGCACTGGGGATGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR TCA 90 bp TCTGCCTCTGTACAAAAGACCAGCCCATGCCCTGGGGCTGGGTCAATGGCCGGAACCAGCCGCCGTCTGTaGGCTCCACCAGCACTCGCA +
Preference number: 4 (lower is better)
Translates to: SASVQKTSPCPGAGSMAGTSRRL*APPALA
Trigger: TGCGAGTGCTGGTGGAGCTCACAGACGGCGGCTGGT...TCCGGCCATTGACCCAGCCCCAGGGCATGGGCTGGTCTTTTGTACAGAGGCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR TCA 90 bp GCCGCCGTCTGTGAGCTCCACCAGCACTCGCAGCAAGTCAGTCGGGCTGAGAGTTCAGGGCTCCTGGGCTaGTGTGGTGGCTTCTTCCCT +
Preference number: 4 (lower is better)
Translates to: AAVCELHQHSQQVSRAESSGLLG*CGGFFP
Trigger: AGGGAAGAAGCCACCACATCAGCCCAGGAGCCCTGA...ACTCTCAGCCCGACTGACTTGCTGCGAGTGCTGGTGGAGCTCACAGACGGCGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR TCA 90 bp CCTCTGTACAAAAGACCAGCCCATGCCCTGGGGCTGGGTCAATGGCCGGAGTCTCTGGGAAGATCGCCTTaGGGACCTGCTGCGCCCCGA +
Preference number: 4 (lower is better)
Translates to: PLYKRPAHALGLGQWPESLGRSP*GPAAPR
Trigger: TCGGGGCGCAGCAGGTCCTCAAGGCGATCTTCCCAG...AGACTCCGGCCATTGACCCAGCCCCAGGGCATGGGCTGGTCTTTTGTACAGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000327979.8
CDS-3UTR GCA 90 bp GCCGCCGTCTGTGAGCTCCACCAGCACTCGCAGCAAGTCAGTCGGGCTGAGAGTTCCACCACGATGACCTaGGGCCGCGTCGTGAAGAAG +
Preference number: 4 (lower is better)
Translates to: AAVCELHQHSQQVSRAESSTTMT*GRVVKK
Trigger: CTTCTTCACGACGCGGCCGCAGGTCATCGTGGTGGA...ACTCTCAGCCCGACTGACTTGCTGCGAGTGCTGGTGGAGCTCACAGACGGCGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR GCA 90 bp CCTCTGTACAAAAGACCAGCCCATGCCCTGGGGCTGGGTCAATGGCCGGAGTCTAGGTGGACGCCGACGTaGTGGTCTCCGTGTCTCGGG +
Preference number: 4 (lower is better)
Translates to: PLYKRPAHALGLGQWPESRWTPT*WSPCLG
Trigger: CCCGAGACACGGAGACCAGCACGTCGGCGTCCACCT...AGACTCCGGCCATTGACCCAGCCCCAGGGCATGGGCTGGTCTTTTGTACAGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR GCA 90 bp TGGGCAGCTCACACTCCTGGAGGAGTGCACAGCACCATTACCCAGAGTGCAGGCGCCGAGGTGTGCTCCTaGCGTGCTCTGCAGGGCTTC +
Preference number: 4 (lower is better)
Translates to: WAAHTPGGVHSTITQSAGAEVCS*RALQGF
Trigger: GAAGCCCTGCAGAGCACGGCAGGAGCACACCTCGGC...GCCTGCACTCTGGGTAATGGTGCTGTGCACTCCTCCAGGAGTGTGAGCTGCCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR GCA 90 bp TCTGCCTCTGTACAAAAGACCAGCCCATGCCCTGGGGCTGGGTCAATGGCCGGACCACAGCTGACCACCTaGTCCAGGAGCCTGCGGCAC +
Preference number: 4 (lower is better)
Translates to: SASVQKTSPCPGAGSMAGPQLTT*SRSLRH
Trigger: GTGCCGCAGGCTCCTGGAGCAGGTGGTCAGCTGTGG...TCCGGCCATTGACCCAGCCCCAGGGCATGGGCTGGTCTTTTGTACAGAGGCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR GCA 90 bp TGGGCAGCTCACACTCCTGGAGGAGTGCACAGCACCATTACCCAGAGTGCAGGCCCACAGCTGACCACCTaGTCCAGGAGCCTGCGGCAC +
Preference number: 4 (lower is better)
Translates to: WAAHTPGGVHSTITQSAGPQLTT*SRSLRH
Trigger: GTGCCGCAGGCTCCTGGAGCAGGTGGTCAGCTGTGG...GCCTGCACTCTGGGTAATGGTGCTGTGCACTCCTCCAGGAGTGTGAGCTGCCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR GCA 90 bp TCTGCCTCTGTACAAAAGACCAGCCCATGCCCTGGGGCTGGGTCAATGGCCGGATGCACACCCTCGGAGTaGCGTCCAGCTGGAGCAGCG +
Preference number: 4 (lower is better)
Translates to: SASVQKTSPCPGAGSMAGCTPSE*RPAGAA
Trigger: CGCTGCTCCAGCTGGACGGCACTCCGAGGGTGTGCA...TCCGGCCATTGACCCAGCCCCAGGGCATGGGCTGGTCTTTTGTACAGAGGCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR GCA 90 bp CTGCATCCCCAGTGCCTCTTGACGCAGAAGTGCCGAGCAGCTGACCGGCAGCGACTCTTGACGCAGAAGTaGCGAGCAGCTGACCGGCAG +
Preference number: 4 (lower is better)
Translates to: LHPQCLLTQKCRAADRQRLLTQK*RAADRQ
Trigger: CTGCCGGTCAGCTGCTCGGCACTTCTGCGTCAAGAG...TCGCTGCCGGTCAGCTGCTCGGCACTTCTGCGTCAAGAGGCACTGGGGATGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR GCA 90 bp GCCGCCGTCTGTGAGCTCCACCAGCACTCGCAGCAAGTCAGTCGGGCTGAGAGTAGTGAGTGGCCCTACTaGCTGTGCTGCTCAGGGCTC +
Preference number: 4 (lower is better)
Translates to: AAVCELHQHSQQVSRAESSEWPY*LCCSGL
Trigger: GAGCCCTGAGCAGCACAGGCAGTAGGGCCACTCACT...ACTCTCAGCCCGACTGACTTGCTGCGAGTGCTGGTGGAGCTCACAGACGGCGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR GCA 90 bp CTGCATCCCCAGTGCCTCTTGACGCAGAAGTGCCGAGCAGCTGACCGGCAGCGAATCGCCTTGAGGACCTaGTGCGCCCCGAGTCTTCCT +
Preference number: 4 (lower is better)
Translates to: LHPQCLLTQKCRAADRQRIALRT*CAPSLP
Trigger: AGGAAGACTCGGGGCGCAGCAGGTCCTCAAGGCGAT...TCGCTGCCGGTCAGCTGCTCGGCACTTCTGCGTCAAGAGGCACTGGGGATGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327979.8
CDS-3UTR CCA 90 bp AAAAGACCAGCCCATGCCCTGGGGCTGGGTCAATGGCCGGAGTCTCAGGTAGAGGATGGAGGTGGCCCTTaGGCCACCCAGCAGCAAGGC +
Preference number: 4 (lower is better)
Translates to: KRPAHALGLGQWPESQVEDGGGP*ATQQQG
Trigger: GCCTTGCTGCTGGGTGGCCCAAGGGCCACCTCCATC...CTCTACCTGAGACTCCGGCCATTGACCCAGCCCCAGGGCATGGGCTGGTCTTTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR CCA 90 bp CAGTGCCTCTTGACGCAGAAGTGCCGAGCAGCTGACCGGCAGCGAGGCCTGGAGTCTTCAATGGAGGCGTaGGGACCGAAGGTCAAGGGC +
Preference number: 4 (lower is better)
Translates to: QCLLTQKCRAADRQRGLESSMEA*GPKVKG
Trigger: GCCCTTGACCTTCGGTCCCCACGCCTCCATTGAAGA...CTCCAGGCCTCGCTGCCGGTCAGCTGCTCGGCACTTCTGCGTCAAGAGGCACTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR CCA 90 bp AAAAGACCAGCCCATGCCCTGGGGCTGGGTCAATGGCCGGAGTCTCAGGTAGAGGAGGTGGGCCATCTCTaGCAGGAGACCTGGGGGCAG +
Preference number: 4 (lower is better)
Translates to: KRPAHALGLGQWPESQVEEVGHL*QETWGQ
Trigger: CTGCCCCCAGGTCTCCTGCCAGAGATGGCCCACCTC...CTCTACCTGAGACTCCGGCCATTGACCCAGCCCCAGGGCATGGGCTGGTCTTTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR CCA 90 bp GCCGCCGTCTGTGAGCTCCACCAGCACTCGCAGCAAGTCAGTCGGGCTGAGAGTGTTGCCCCTTCCTCGTaGCCGTTCTGGCTACTCGAG +
Preference number: 4 (lower is better)
Translates to: AAVCELHQHSQQVSRAESVAPSS*PFWLLE
Trigger: CTCGAGTAGCCAGAACGGCCACGAGGAAGGGGCAAC...ACTCTCAGCCCGACTGACTTGCTGCGAGTGCTGGTGGAGCTCACAGACGGCGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR CCA 90 bp GGCCTTGGCCCTTTTGTAGGTGGCCACCTAGTTTGGCTCAGCTCTGCATCTCGGGTCTGGGGCAGAGGCTaGAGCTGGCCCAGCCGCTTC +
Preference number: 4 (lower is better)
Translates to: GLGPFVGGHLVWLSSASRVWGRG*SWPSRF
Trigger: GAAGCGGCTGGGCCAGCTCCAGCCTCTGCCCCAGAC...CCGAGATGCAGAGCTGAGCCAAACTAGGTGGCCACCTACAAAAGGGCCAAGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR CCA 90 bp TTAGGGCCTCAACTTGCCTGGCCTTGGCCCTTTTGTAGGTGGCCACCTAGTTTGCAGCCAGGCGAGCGCTaGCCGCCCTGCACACCCTCG +
Preference number: 4 (lower is better)
Translates to: LGPQLAWPWPFCRWPPSLQPGER*PPCTPS
Trigger: CGAGGGTGTGCAGGGCGGCCAGCGCTCGCCTGGCTG...CAAACTAGGTGGCCACCTACAAAAGGGCCAAGGCCAGGCAAGTTGAGGCCCTAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR CCA 90 bp TGGGCAGCTCACACTCCTGGAGGAGTGCACAGCACCATTACCCAGAGTGCAGGCAGGCGGCCATGGAGCTaGGGTTCCAGGAAGCCCTCC +
Preference number: 4 (lower is better)
Translates to: WAAHTPGGVHSTITQSAGRRPWS*GSRKPS
Trigger: GGAGGGCTTCCTGGAACCCCAGCTCCATGGCCGCCT...GCCTGCACTCTGGGTAATGGTGCTGTGCACTCCTCCAGGAGTGTGAGCTGCCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327979.8
CDS-3UTR CCA 90 bp CCTCTGTACAAAAGACCAGCCCATGCCCTGGGGCTGGGTCAATGGCCGGAGTCTCCCGAGTCTTCCTTCTaGTGCAGGGAGGCCGGTGCC +
Preference number: 4 (lower is better)
Translates to: PLYKRPAHALGLGQWPESPESSF*CREAGA
Trigger: GGCACCGGCCTCCCTGCACCAGAAGGAAGACTCGGG...AGACTCCGGCCATTGACCCAGCCCCAGGGCATGGGCTGGTCTTTTGTACAGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327979.8
CDS-3UTR TCA 90 bp CAGTGCCTCTTGACGCAGAAGTGCCGAGCAGCTGACCGGCAGCGAGGCCTGGAGCCAAGCCTTTCATCCTaGTGTGGAACTCGCCCAGGT +
Preference number: 4 (lower is better)
Translates to: QCLLTQKCRAADRQRGLEPSLSS*CGTRPG
Trigger: ACCTGGGCGAGTTCCACATCAGGATGAAAGGCTTGG...CTCCAGGCCTCGCTGCCGGTCAGCTGCTCGGCACTTCTGCGTCAAGAGGCACTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR TCA 90 bp TCTGCCTCTGTACAAAAGACCAGCCCATGCCCTGGGGCTGGGTCAATGGCCGGAGGCGGCCCAGACGCATaGGCACCTCATAGTGGTCTC +
Preference number: 4 (lower is better)
Translates to: SASVQKTSPCPGAGSMAGGGPDA*APHSGL
Trigger: GAGACCACTATGAGGTGCTCATGCGTCTGGGCCGCC...TCCGGCCATTGACCCAGCCCCAGGGCATGGGCTGGTCTTTTGTACAGAGGCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR TCA 90 bp GCCGCCGTCTGTGAGCTCCACCAGCACTCGCAGCAAGTCAGTCGGGCTGAGAGTGGTCTGGCTGTCATCTaGCTCGATCCGACCCTTGAG +
Preference number: 4 (lower is better)
Translates to: AAVCELHQHSQQVSRAESGLAVI*LDPTLE
Trigger: CTCAAGGGTCGGATCGAGTCAGATGACAGCCAGACC...ACTCTCAGCCCGACTGACTTGCTGCGAGTGCTGGTGGAGCTCACAGACGGCGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR TCA 90 bp GCCGCCGTCTGTGAGCTCCACCAGCACTCGCAGCAAGTCAGTCGGGCTGAGAGTTGTCAGACAGGTAGCTaGGGATGGAGGTGGCCCTTG +
Preference number: 4 (lower is better)
Translates to: AAVCELHQHSQQVSRAESCQTGS*GWRWPL
Trigger: CAAGGGCCACCTCCATCCTCAGCTACCTGTCTGACA...ACTCTCAGCCCGACTGACTTGCTGCGAGTGCTGGTGGAGCTCACAGACGGCGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR GCA 90 bp GTGCACAGCACCATTACCCAGAGTGCAGGCTATGTCCAGGCTGGGCAGCAGCAATGCACTGCTGAAGCCTaGGAAGGAGGCGCTCCGGCC +
Preference number: 4 (lower is better)
Translates to: VHSTITQSAGYVQAGQQQCTAEA*EGGAPA
Trigger: GGCCGGAGCGCCTCCTTCGCAGGCTTCAGCAGTGCA...TTGCTGCTGCCCAGCCTGGACATAGCCTGCACTCTGGGTAATGGTGCTGTGCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR GCA 90 bp CAGTGCCTCTTGACGCAGAAGTGCCGAGCAGCTGACCGGCAGCGAGGCCTGGAGACCCCTTCCGCAGCGTaGCGTACATCTTGGAGGATT +
Preference number: 4 (lower is better)
Translates to: QCLLTQKCRAADRQRGLETPSAA*RTSWRI
Trigger: AATCCTCCAAGATGTACGGCACGCTGCGGAAGGGGT...CTCCAGGCCTCGCTGCCGGTCAGCTGCTCGGCACTTCTGCGTCAAGAGGCACTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR GCA 90 bp CTGCATCCCCAGTGCCTCTTGACGCAGAAGTGCCGAGCAGCTGACCGGCAGCGAGCAGGCGGCACTGGATaGAGTAGTCCTCGTACAGCT +
Preference number: 4 (lower is better)
Translates to: LHPQCLLTQKCRAADRQRAGGTG*SSPRTA
Trigger: AGCTGTACGAGGACTACTGCATCCAGTGCCGCCTGC...TCGCTGCCGGTCAGCTGCTCGGCACTTCTGCGTCAAGAGGCACTGGGGATGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR GCA 90 bp GGCTCCTGGGCTGATGTGGTGGCTTCTTCCCTTTGTGCTGCTGAACATAGGGAATCCTCGGCGCACTCGTaGAGGCTGCGGCCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: GSWADVVASSLCAAEHRESSAHS*RLRPSS
Trigger: GGAGCTGGGCCGCAGCCTGCACGAGTGCGCCGAGGA...TTCCCTATGTTCAGCAGCACAAAGGGAAGAAGCCACCACATCAGCCCAGGAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR GCA 90 bp CCGGCAGCGAGGCCTGGAGTTCTACACACTTGCCTTGGAGCCTTTTATTTAGGGTCCTCGGCGCACTCGTaGAGGCTGCGGCCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: PAARPGVLHTCLGAFYLGSSAHS*RLRPSS
Trigger: GGAGCTGGGCCGCAGCCTGCACGAGTGCGCCGAGGA...CCCTAAATAAAAGGCTCCAAGGCAAGTGTGTAGAACTCCAGGCCTCGCTGCCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR GCA 90 bp CAGTGCCTCTTGACGCAGAAGTGCCGAGCAGCTGACCGGCAGCGAGGCCTGGAGATGTCCAGGTTCTCATaGAGCGTGGGGATGAAGGCC +
Preference number: 4 (lower is better)
Translates to: QCLLTQKCRAADRQRGLEMSRFS*SVGMKA
Trigger: GGCCTTCATCCCCACGCTGCATGAGAACCTGGACAT...CTCCAGGCCTCGCTGCCGGTCAGCTGCTCGGCACTTCTGCGTCAAGAGGCACTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR GCA 90 bp GGCCTTGGCCCTTTTGTAGGTGGCCACCTAGTTTGGCTCAGCTCTGCATCTCGGAGGTGGACGCCGACGTaGTGGTCTCCGTGTCTCGGG +
Preference number: 4 (lower is better)
Translates to: GLGPFVGGHLVWLSSASRRWTPT*WSPCLG
Trigger: CCCGAGACACGGAGACCAGCACGTCGGCGTCCACCT...CCGAGATGCAGAGCTGAGCCAAACTAGGTGGCCACCTACAAAAGGGCCAAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR GCA 90 bp CTCAACTTGCCTGGCCTTGGCCCTTTTGTAGGTGGCCACCTAGTTTGGCTCAGCGCTCCTGCCGTGCTCTaGAGGGCTTCAGCCGGTCCC +
Preference number: 4 (lower is better)
Translates to: LNLPGLGPFVGGHLVWLSAPAVL*RASAGP
Trigger: GGGACCGGCTGAAGCCCTGCAGAGCACGGCAGGAGC...GCTGAGCCAAACTAGGTGGCCACCTACAAAAGGGCCAAGGCCAGGCAAGTTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR GCA 90 bp AAAAGACCAGCCCATGCCCTGGGGCTGGGTCAATGGCCGGAGTCTCAGGTAGAGCCCTGCCAGGCCCTGTaGACCCTCTCCACAGCTTCA +
Preference number: 4 (lower is better)
Translates to: KRPAHALGLGQWPESQVEPCQAL*TLSTAS
Trigger: TGAAGCTGTGGAGAGGGTGCACAGGGCCTGGCAGGG...CTCTACCTGAGACTCCGGCCATTGACCCAGCCCCAGGGCATGGGCTGGTCTTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR GCA 90 bp CAGTGCCTCTTGACGCAGAAGTGCCGAGCAGCTGACCGGCAGCGAGGCCTGGAGCCTTGCGTCGTTCTCTaGCAGGGCGTTGGTGTAGAA +
Preference number: 4 (lower is better)
Translates to: QCLLTQKCRAADRQRGLEPCVVL*QGVGVE
Trigger: TTCTACACCAACGCCCTGGCAGAGAACGACGCAAGG...CTCCAGGCCTCGCTGCCGGTCAGCTGCTCGGCACTTCTGCGTCAAGAGGCACTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR GCA 90 bp GTGCACAGCACCATTACCCAGAGTGCAGGCTATGTCCAGGCTGGGCAGCAGCAAGGCCTGCTGGAGCCTTaGGTCGTTCTCTGCCAGGGC +
Preference number: 4 (lower is better)
Translates to: VHSTITQSAGYVQAGQQQGLLEP*VVLCQG
Trigger: GCCCTGGCAGAGAACGACGCAAGGCTCCAGCAGGCC...TTGCTGCTGCCCAGCCTGGACATAGCCTGCACTCTGGGTAATGGTGCTGTGCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR GCA 90 bp AAAAGACCAGCCCATGCCCTGGGGCTGGGTCAATGGCCGGAGTCTCAGGTAGAGGCTAGGCATGCGGCCTaGTGGAGCCTTGCGTCGTTC +
Preference number: 4 (lower is better)
Translates to: KRPAHALGLGQWPESQVEARHAA*WSLASF
Trigger: GAACGACGCAAGGCTCCAGCAGGCCGCATGCCTAGC...CTCTACCTGAGACTCCGGCCATTGACCCAGCCCCAGGGCATGGGCTGGTCTTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR GCA 90 bp CCTCTGTACAAAAGACCAGCCCATGCCCTGGGGCTGGGTCAATGGCCGGAGTCTAGCCACCTGCCAGCCTaGTGCATCCCCAGTGCCTCT +
Preference number: 4 (lower is better)
Translates to: PLYKRPAHALGLGQWPESSHLPA*CIPSAS
Trigger: AGAGGCACTGGGGATGCAGCAGGCTGGCAGGTGGCT...AGACTCCGGCCATTGACCCAGCCCCAGGGCATGGGCTGGTCTTTTGTACAGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR GCA 90 bp TCTGCCTCTGTACAAAAGACCAGCCCATGCCCTGGGGCTGGGTCAATGGCCGGAAGCCACCTGCCAGCCTaGTGCATCCCCAGTGCCTCT +
Preference number: 4 (lower is better)
Translates to: SASVQKTSPCPGAGSMAGSHLPA*CIPSAS
Trigger: AGAGGCACTGGGGATGCAGCAGGCTGGCAGGTGGCT...TCCGGCCATTGACCCAGCCCCAGGGCATGGGCTGGTCTTTTGTACAGAGGCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR GCA 90 bp GCCGCCGTCTGTGAGCTCCACCAGCACTCGCAGCAAGTCAGTCGGGCTGAGAGTGAAACCCTGGCTTTGTaGCTTCCCACCTTCCCCAGC +
Preference number: 4 (lower is better)
Translates to: AAVCELHQHSQQVSRAESETLAL*LPTFPS
Trigger: GCTGGGGAAGGTGGGAAGGCACAAAGCCAGGGTTTC...ACTCTCAGCCCGACTGACTTGCTGCGAGTGCTGGTGGAGCTCACAGACGGCGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR GCA 90 bp CTCAACTTGCCTGGCCTTGGCCCTTTTGTAGGTGGCCACCTAGTTTGGCTCAGCCCGCCAGCAAGCGTCTaGTCCCATCTGGCCCGGGAC +
Preference number: 4 (lower is better)
Translates to: LNLPGLGPFVGGHLVWLSPPASV*SHLARD
Trigger: GTCCCGGGCCAGATGGGAGCAGACGCTTGCTGGCGG...GCTGAGCCAAACTAGGTGGCCACCTACAAAAGGGCCAAGGCCAGGCAAGTTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327979.8
CDS-3UTR GCA 90 bp CAGTGCCTCTTGACGCAGAAGTGCCGAGCAGCTGACCGGCAGCGAGGCCTGGAGCCTCACTTTCCCTATTaGCGCCAGCAAGCGTCTGCT +
Preference number: 4 (lower is better)
Translates to: QCLLTQKCRAADRQRGLEPHFPY*RQQASA
Trigger: AGCAGACGCTTGCTGGCGGCAATAGGGAAAGTGAGG...CTCCAGGCCTCGCTGCCGGTCAGCTGCTCGGCACTTCTGCGTCAAGAGGCACTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327979.8
CDS-3UTR GCA 90 bp TCTGCCTCTGTACAAAAGACCAGCCCATGCCCTGGGGCTGGGTCAATGGCCGGAGTCTGGACACTCGAGTaGAGTCCCGCCGCCCTCCTT +
Preference number: 4 (lower is better)
Translates to: SASVQKTSPCPGAGSMAGVWTLE*SPAALL
Trigger: AAGGAGGGCGGCGGGACTGCACTCGAGTGTCCAGAC...TCCGGCCATTGACCCAGCCCCAGGGCATGGGCTGGTCTTTTGTACAGAGGCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327979.8
CDS-3UTR CCA 90 bp TGGGCAGCTCACACTCCTGGAGGAGTGCACAGCACCATTACCCAGAGTGCAGGCAGCCCTGTGGCAGGCTaGGGCTCTCCCCTCCTAAGT +
Preference number: 4 (lower is better)
Translates to: WAAHTPGGVHSTITQSAGSPVAG*GSPLLS
Trigger: ACTTAGGAGGGGAGAGCCCCAGCCTGCCACAGGGCT...GCCTGCACTCTGGGTAATGGTGCTGTGCACTCCTCCAGGAGTGTGAGCTGCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR CCA 90 bp TCTGCCTCTGTACAAAAGACCAGCCCATGCCCTGGGGCTGGGTCAATGGCCGGATCCTCGTGGCCGTTCTaGCTACTCGAGGCTGTGCCG +
Preference number: 4 (lower is better)
Translates to: SASVQKTSPCPGAGSMAGSSWPF*LLEAVP
Trigger: CGGCACAGCCTCGAGTAGCCAGAACGGCCACGAGGA...TCCGGCCATTGACCCAGCCCCAGGGCATGGGCTGGTCTTTTGTACAGAGGCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR CCA 90 bp TCTGCCTCTGTACAAAAGACCAGCCCATGCCCTGGGGCTGGGTCAATGGCCGGAGCTGGGTGGAGTCCGTaGGCCTCAGCAACTCCAGGA +
Preference number: 4 (lower is better)
Translates to: SASVQKTSPCPGAGSMAGAGWSP*ASATPG
Trigger: TCCTGGAGTTGCTGAGGCCCACGGACTCCACCCAGC...TCCGGCCATTGACCCAGCCCCAGGGCATGGGCTGGTCTTTTGTACAGAGGCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR CCA 90 bp CCGGCAGCGAGGCCTGGAGTTCTACACACTTGCCTTGGAGCCTTTTATTTAGGGTCCCGGAGCTGGGGCTaGGTGGAGTCCGTGGGCCTC +
Preference number: 4 (lower is better)
Translates to: PAARPGVLHTCLGAFYLGSRSWG*VESVGL
Trigger: GAGGCCCACGGACTCCACCCAGCCCCAGCTCCGGGA...CCCTAAATAAAAGGCTCCAAGGCAAGTGTGTAGAACTCCAGGCCTCGCTGCCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR CCA 90 bp GTGCACAGCACCATTACCCAGAGTGCAGGCTATGTCCAGGCTGGGCAGCAGCAAGGAGTGCCGTCCAGCTaGAGCAGCGCCCAGGCTCTT +
Preference number: 4 (lower is better)
Translates to: VHSTITQSAGYVQAGQQQGVPSS*SSAQAL
Trigger: AAGAGCCTGGGCGCTGCTCCAGCTGGACGGCACTCC...TTGCTGCTGCCCAGCCTGGACATAGCCTGCACTCTGGGTAATGGTGCTGTGCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR CCA 90 bp CTGCATCCCCAGTGCCTCTTGACGCAGAAGTGCCGAGCAGCTGACCGGCAGCGAGGCAGCTCACACTCCTaGAGGAGTGCACAGCACCAT +
Preference number: 4 (lower is better)
Translates to: LHPQCLLTQKCRAADRQRGSSHS*RSAQHH
Trigger: ATGGTGCTGTGCACTCCTCCAGGAGTGTGAGCTGCC...TCGCTGCCGGTCAGCTGCTCGGCACTTCTGCGTCAAGAGGCACTGGGGATGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR CCA 90 bp CTGCATCCCCAGTGCCTCTTGACGCAGAAGTGCCGAGCAGCTGACCGGCAGCGAGGGCCTCAACTTGCCTaGCCTTGGCCCTTTTGTAGG +
Preference number: 4 (lower is better)
Translates to: LHPQCLLTQKCRAADRQRGPQLA*PWPFCR
Trigger: CCTACAAAAGGGCCAAGGCCAGGCAAGTTGAGGCCC...TCGCTGCCGGTCAGCTGCTCGGCACTTCTGCGTCAAGAGGCACTGGGGATGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR CCA 90 bp CTGCATCCCCAGTGCCTCTTGACGCAGAAGTGCCGAGCAGCTGACCGGCAGCGAACCGGCAGCGAGGCCTaGAGTTCTACACACTTGCCT +
Preference number: 4 (lower is better)
Translates to: LHPQCLLTQKCRAADRQRTGSEA*SSTHLP
Trigger: AGGCAAGTGTGTAGAACTCCAGGCCTCGCTGCCGGT...TCGCTGCCGGTCAGCTGCTCGGCACTTCTGCGTCAAGAGGCACTGGGGATGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR CCA 90 bp CAGTGCCTCTTGACGCAGAAGTGCCGAGCAGCTGACCGGCAGCGAGGCCTGGAGCCTGGGCTGATGTGGTaGCTTCTTCCCTTTGTGCTG +
Preference number: 4 (lower is better)
Translates to: QCLLTQKCRAADRQRGLEPGLMW*LLPFVL
Trigger: CAGCACAAAGGGAAGAAGCCACCACATCAGCCCAGG...CTCCAGGCCTCGCTGCCGGTCAGCTGCTCGGCACTTCTGCGTCAAGAGGCACTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR CCA 90 bp CAGTGCCTCTTGACGCAGAAGTGCCGAGCAGCTGACCGGCAGCGAGGCCTGGAGGCTCCTGGGCTGATGTaGTGGCTTCTTCCCTTTGTG +
Preference number: 4 (lower is better)
Translates to: QCLLTQKCRAADRQRGLEAPGLM*WLLPFV
Trigger: CACAAAGGGAAGAAGCCACCACATCAGCCCAGGAGC...CTCCAGGCCTCGCTGCCGGTCAGCTGCTCGGCACTTCTGCGTCAAGAGGCACTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR CCA 90 bp GCCGCCGTCTGTGAGCTCCACCAGCACTCGCAGCAAGTCAGTCGGGCTGAGAGTAAATTCCATCCACACTaGCCACCAGCCGCTGGTCCC +
Preference number: 4 (lower is better)
Translates to: AAVCELHQHSQQVSRAESKFHPH*PPAAGP
Trigger: GGGACCAGCGGCTGGTGGCCAGTGTGGATGGAATTT...ACTCTCAGCCCGACTGACTTGCTGCGAGTGCTGGTGGAGCTCACAGACGGCGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327979.8
CDS-3UTR CCA 90 bp CTCAACTTGCCTGGCCTTGGCCCTTTTGTAGGTGGCCACCTAGTTTGGCTCAGCGCGTCTGCTCCCATCTaGCCCGGGACTCCCGGACTC +
Preference number: 4 (lower is better)
Translates to: LNLPGLGPFVGGHLVWLSASAPI*PGTPGL
Trigger: GAGTCCGGGAGTCCCGGGCCAGATGGGAGCAGACGC...GCTGAGCCAAACTAGGTGGCCACCTACAAAAGGGCCAAGGCCAGGCAAGTTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327979.8
CDS-3UTR TCA 90 bp CTGCATCCCCAGTGCCTCTTGACGCAGAAGTGCCGAGCAGCTGACCGGCAGCGAATCTCAGGCAGCTCCTaGCTCTGGCTTCTTAGGCTG +
Preference number: 4 (lower is better)
Translates to: LHPQCLLTQKCRAADRQRISGSS*LWLLRL
Trigger: CAGCCTAAGAAGCCAGAGTCAGGAGCTGCCTGAGAT...TCGCTGCCGGTCAGCTGCTCGGCACTTCTGCGTCAAGAGGCACTGGGGATGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR TCA 90 bp CCTCTGTACAAAAGACCAGCCCATGCCCTGGGGCTGGGTCAATGGCCGGAGTCTGGGCGAAGTCGGCATTaGGGAAGGCGAAGCTCTCCA +
Preference number: 4 (lower is better)
Translates to: PLYKRPAHALGLGQWPESGRSRH*GRRSSP
Trigger: TGGAGAGCTTCGCCTTCCTCAATGCCGACTTCGCCC...AGACTCCGGCCATTGACCCAGCCCCAGGGCATGGGCTGGTCTTTTGTACAGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR TCA 90 bp TGGGCAGCTCACACTCCTGGAGGAGTGCACAGCACCATTACCCAGAGTGCAGGCGGGCGAAGTCGGCATTaGGGAAGGCGAAGCTCTCCA +
Preference number: 4 (lower is better)
Translates to: WAAHTPGGVHSTITQSAGGRSRH*GRRSSP
Trigger: TGGAGAGCTTCGCCTTCCTCAATGCCGACTTCGCCC...GCCTGCACTCTGGGTAATGGTGCTGTGCACTCCTCCAGGAGTGTGAGCTGCCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR TCA 90 bp GTGCACAGCACCATTACCCAGAGTGCAGGCTATGTCCAGGCTGGGCAGCAGCAACTGGGGCACCGGCTGTaGGTTCCCTGGATGACGCTT +
Preference number: 4 (lower is better)
Translates to: VHSTITQSAGYVQAGQQQLGHRL*VPWMTL
Trigger: AAGCGTCATCCAGGGAACTCACAGCCGGTGCCCCAG...TTGCTGCTGCCCAGCCTGGACATAGCCTGCACTCTGGGTAATGGTGCTGTGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR TCA 90 bp CCTCTGTACAAAAGACCAGCCCATGCCCTGGGGCTGGGTCAATGGCCGGAGTCTGCCTGTCCCGCACAGTaGAGCTCCTCGATGAGTGTC +
Preference number: 4 (lower is better)
Translates to: PLYKRPAHALGLGQWPESACPAQ*SSSMSV
Trigger: GACACTCATCGAGGAGCTTCACTGTGCGGGACAGGC...AGACTCCGGCCATTGACCCAGCCCCAGGGCATGGGCTGGTCTTTTGTACAGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR TCA 90 bp TGGGCAGCTCACACTCCTGGAGGAGTGCACAGCACCATTACCCAGAGTGCAGGCGGAAGCTTCTGTTCCTaGCTGCACCAGCCAGGCGAG +
Preference number: 4 (lower is better)
Translates to: WAAHTPGGVHSTITQSAGGSFCS*LHQPGE
Trigger: CTCGCCTGGCTGGTGCAGTCAGGAACAGAAGCTTCC...GCCTGCACTCTGGGTAATGGTGCTGTGCACTCCTCCAGGAGTGTGAGCTGCCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR TCA 90 bp TCTGCCTCTGTACAAAAGACCAGCCCATGCCCTGGGGCTGGGTCAATGGCCGGAATCCCCAGTGCCTCTTaGCGCAGAAGTGCCGAGCAG +
Preference number: 4 (lower is better)
Translates to: SASVQKTSPCPGAGSMAGIPSAS*RRSAEQ
Trigger: CTGCTCGGCACTTCTGCGTCAAGAGGCACTGGGGAT...TCCGGCCATTGACCCAGCCCCAGGGCATGGGCTGGTCTTTTGTACAGAGGCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR TCA 90 bp CCTCTGTACAAAAGACCAGCCCATGCCCTGGGGCTGGGTCAATGGCCGGAGTCTCCCAGCTCACCAAGGTaGCACCTGGCTGCTGCTGAA +
Preference number: 4 (lower is better)
Translates to: PLYKRPAHALGLGQWPESPSSPR*HLAAAE
Trigger: TTCAGCAGCAGCCAGGTGTCACCTTGGTGAGCTGGG...AGACTCCGGCCATTGACCCAGCCCCAGGGCATGGGCTGGTCTTTTGTACAGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR TCA 90 bp TGGGCAGCTCACACTCCTGGAGGAGTGCACAGCACCATTACCCAGAGTGCAGGCTCAGGGCTCCTGGGCTaGTGTGGTGGCTTCTTCCCT +
Preference number: 4 (lower is better)
Translates to: WAAHTPGGVHSTITQSAGSGLLG*CGGFFP
Trigger: AGGGAAGAAGCCACCACATCAGCCCAGGAGCCCTGA...GCCTGCACTCTGGGTAATGGTGCTGTGCACTCCTCCAGGAGTGTGAGCTGCCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR TCA 90 bp TGGGCAGCTCACACTCCTGGAGGAGTGCACAGCACCATTACCCAGAGTGCAGGCTGCGGATGGCCAAAGTaGGTGGCCCTACTGCCTGTG +
Preference number: 4 (lower is better)
Translates to: WAAHTPGGVHSTITQSAGCGWPK*VALLPV
Trigger: CACAGGCAGTAGGGCCACTCACTTTGGCCATCCGCA...GCCTGCACTCTGGGTAATGGTGCTGTGCACTCCTCCAGGAGTGTGAGCTGCCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR GCA 90 bp GCCGCCGTCTGTGAGCTCCACCAGCACTCGCAGCAAGTCAGTCGGGCTGAGAGTCCTGTTGATGGACTTTaGGATCCTCCGGCTCTGTGC +
Preference number: 4 (lower is better)
Translates to: AAVCELHQHSQQVSRAESPVDGL*DPPALC
Trigger: GCACAGAGCCGGAGGATCGCAAAGTCCATCAACAGG...ACTCTCAGCCCGACTGACTTGCTGCGAGTGCTGGTGGAGCTCACAGACGGCGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR GCA 90 bp GCCGCCGTCTGTGAGCTCCACCAGCACTCGCAGCAAGTCAGTCGGGCTGAGAGTACCCCTTCCGCAGCGTaGCGTACATCTTGGAGGATT +
Preference number: 4 (lower is better)
Translates to: AAVCELHQHSQQVSRAESTPSAA*RTSWRI
Trigger: AATCCTCCAAGATGTACGGCACGCTGCGGAAGGGGT...ACTCTCAGCCCGACTGACTTGCTGCGAGTGCTGGTGGAGCTCACAGACGGCGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR GCA 90 bp TCTGCCTCTGTACAAAAGACCAGCCCATGCCCTGGGGCTGGGTCAATGGCCGGATCCGGGACAGAGGCGTaGGTAGCCCACCAAGCCTTT +
Preference number: 4 (lower is better)
Translates to: SASVQKTSPCPGAGSMAGSGTEA*VAHQAF
Trigger: AAAGGCTTGGTGGGCTACGCACGCCTCTGTCCCGGA...TCCGGCCATTGACCCAGCCCCAGGGCATGGGCTGGTCTTTTGTACAGAGGCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR GCA 90 bp CTGCATCCCCAGTGCCTCTTGACGCAGAAGTGCCGAGCAGCTGACCGGCAGCGAATGTCCAGGTTCTCATaGAGCGTGGGGATGAAGGCC +
Preference number: 4 (lower is better)
Translates to: LHPQCLLTQKCRAADRQRMSRFS*SVGMKA
Trigger: GGCCTTCATCCCCACGCTGCATGAGAACCTGGACAT...TCGCTGCCGGTCAGCTGCTCGGCACTTCTGCGTCAAGAGGCACTGGGGATGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR GCA 90 bp AAAAGACCAGCCCATGCCCTGGGGCTGGGTCAATGGCCGGAGTCTCAGGTAGAGTTCCTCCAGCCAGGCTaGTCTGCAAACGGGCCTCCA +
Preference number: 4 (lower is better)
Translates to: KRPAHALGLGQWPESQVEFLQPG*SANGPP
Trigger: TGGAGGCCCGTTTGCAGAGCAGCCTGGCTGGAGGAA...CTCTACCTGAGACTCCGGCCATTGACCCAGCCCCAGGGCATGGGCTGGTCTTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR GCA 90 bp AAAAGACCAGCCCATGCCCTGGGGCTGGGTCAATGGCCGGAGTCTCAGGTAGAGCCTGCTCCAGGAGCCTaGGGCACGCTATTTCCAGCT +
Preference number: 4 (lower is better)
Translates to: KRPAHALGLGQWPESQVEPAPGA*GTLFPA
Trigger: AGCTGGAAATAGCGTGCCGCAGGCTCCTGGAGCAGG...CTCTACCTGAGACTCCGGCCATTGACCCAGCCCCAGGGCATGGGCTGGTCTTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR GCA 90 bp CTCAACTTGCCTGGCCTTGGCCCTTTTGTAGGTGGCCACCTAGTTTGGCTCAGCCCCAGCCGCTTCCCCTaGAGCTTCCGGACCACCTTG +
Preference number: 4 (lower is better)
Translates to: LNLPGLGPFVGGHLVWLSPSRFP*SFRTTL
Trigger: CAAGGTGGTCCGGAAGCTGCAGGGGAAGCGGCTGGG...GCTGAGCCAAACTAGGTGGCCACCTACAAAAGGGCCAAGGCCAGGCAAGTTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR GCA 90 bp TGGGCAGCTCACACTCCTGGAGGAGTGCACAGCACCATTACCCAGAGTGCAGGCCTCTTGACGCAGAAGTaGCGAGCAGCTGACCGGCAG +
Preference number: 4 (lower is better)
Translates to: WAAHTPGGVHSTITQSAGLLTQK*RAADRQ
Trigger: CTGCCGGTCAGCTGCTCGGCACTTCTGCGTCAAGAG...GCCTGCACTCTGGGTAATGGTGCTGTGCACTCCTCCAGGAGTGTGAGCTGCCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR GCA 90 bp CAGTGCCTCTTGACGCAGAAGTGCCGAGCAGCTGACCGGCAGCGAGGCCTGGAGGCTGGGTTGATTGATTaGATTTGGGTGCGGATGGCC +
Preference number: 4 (lower is better)
Translates to: QCLLTQKCRAADRQRGLEAGLID*IWVRMA
Trigger: GGCCATCCGCACCCAAATGCAATCAATCAACCCAGC...CTCCAGGCCTCGCTGCCGGTCAGCTGCTCGGCACTTCTGCGTCAAGAGGCACTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR GCA 90 bp GCGAGGCCTGGAGTTCTACACACTTGCCTTGGAGCCTTTTATTTAGGGCCTCAACCCCCGGATGCCGCCTaGTGCTCTGGACGCGGCCGA +
Preference number: 4 (lower is better)
Translates to: ARPGVLHTCLGAFYLGPQPPDAA*CSGRGR
Trigger: TCGGCCGCGTCCAGAGCAGCAGGCGGCATCCGGGGG...TTGAGGCCCTAAATAAAAGGCTCCAAGGCAAGTGTGTAGAACTCCAGGCCTCGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327979.8
CDS-3UTR CCA 90 bp TGGGCAGCTCACACTCCTGGAGGAGTGCACAGCACCATTACCCAGAGTGCAGGCCCGTTCAGACCCGGCTaGTGTGTGCAGGGAGAGGAA +
Preference number: 4 (lower is better)
Translates to: WAAHTPGGVHSTITQSAGPFRPG*CVQGEE
Trigger: TTCCTCTCCCTGCACACACCAGCCGGGTCTGAACGG...GCCTGCACTCTGGGTAATGGTGCTGTGCACTCCTCCAGGAGTGTGAGCTGCCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000045083.6
CDS-3UTR CCA 90 bp CTGCATCCCCAGTGCCTCTTGACGCAGAAGTGCCGAGCAGCTGACCGGCAGCGAATCTTCTTCACCTGCTaGGGCTTCGGGTCTGCACAG +
Preference number: 4 (lower is better)
Translates to: LHPQCLLTQKCRAADRQRIFFTC*GFGSAQ
Trigger: CTGTGCAGACCCGAAGCCCCAGCAGGTGAAGAAGAT...TCGCTGCCGGTCAGCTGCTCGGCACTTCTGCGTCAAGAGGCACTGGGGATGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR CCA 90 bp GGCCTTGGCCCTTTTGTAGGTGGCCACCTAGTTTGGCTCAGCTCTGCATCTCGGTGGCGTCCAGACAGGTaGTCCAGCTCAGCCTGCTGC +
Preference number: 4 (lower is better)
Translates to: GLGPFVGGHLVWLSSASRWRPDR*SSSACC
Trigger: GCAGCAGGCTGAGCTGGACCACCTGTCTGGACGCCA...CCGAGATGCAGAGCTGAGCCAAACTAGGTGGCCACCTACAAAAGGGCCAAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR CCA 90 bp CTGCATCCCCAGTGCCTCTTGACGCAGAAGTGCCGAGCAGCTGACCGGCAGCGAGCCTGGAATTCCTCCTaGTGTCTTTGTGGCGTCCAG +
Preference number: 4 (lower is better)
Translates to: LHPQCLLTQKCRAADRQRAWNSS*CLCGVQ
Trigger: CTGGACGCCACAAAGACACCAGGAGGAATTCCAGGC...TCGCTGCCGGTCAGCTGCTCGGCACTTCTGCGTCAAGAGGCACTGGGGATGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR CCA 90 bp TCTGCCTCTGTACAAAAGACCAGCCCATGCCCTGGGGCTGGGTCAATGGCCGGAACTTGCCCGTGGGGCTaGGTGACACCAGGAAGCTCT +
Preference number: 4 (lower is better)
Translates to: SASVQKTSPCPGAGSMAGTCPWG*VTPGSS
Trigger: AGAGCTTCCTGGTGTCACCCAGCCCCACGGGCAAGT...TCCGGCCATTGACCCAGCCCCAGGGCATGGGCTGGTCTTTTGTACAGAGGCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR CCA 90 bp AAAAGACCAGCCCATGCCCTGGGGCTGGGTCAATGGCCGGAGTCTCAGGTAGAGAGCCCACATCTGAGGTaGACGCCGACGTGCTGGTCT +
Preference number: 4 (lower is better)
Translates to: KRPAHALGLGQWPESQVESPHLR*TPTCWS
Trigger: AGACCAGCACGTCGGCGTCCACCTCAGATGTGGGCT...CTCTACCTGAGACTCCGGCCATTGACCCAGCCCCAGGGCATGGGCTGGTCTTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR CCA 90 bp GTGCACAGCACCATTACCCAGAGTGCAGGCTATGTCCAGGCTGGGCAGCAGCAATCCTCGTGGCCGTTCTaGCTACTCGAGGCTGTGCCG +
Preference number: 4 (lower is better)
Translates to: VHSTITQSAGYVQAGQQQSSWPF*LLEAVP
Trigger: CGGCACAGCCTCGAGTAGCCAGAACGGCCACGAGGA...TTGCTGCTGCCCAGCCTGGACATAGCCTGCACTCTGGGTAATGGTGCTGTGCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR CCA 90 bp GGCTCCTGGGCTGATGTGGTGGCTTCTTCCCTTTGTGCTGCTGAACATAGGGAAGGAGCTGGGGCTGGGTaGAGTCCGTGGGCCTCAGCA +
Preference number: 4 (lower is better)
Translates to: GSWADVVASSLCAAEHREGAGAG*SPWASA
Trigger: TGCTGAGGCCCACGGACTCCACCCAGCCCCAGCTCC...TTCCCTATGTTCAGCAGCACAAAGGGAAGAAGCCACCACATCAGCCCAGGAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR CCA 90 bp CCTCTGTACAAAAGACCAGCCCATGCCCTGGGGCTGGGTCAATGGCCGGAGTCTTCCTTTCGGAGACCCTaGGAGCCCCCAAACAGGGAC +
Preference number: 4 (lower is better)
Translates to: PLYKRPAHALGLGQWPESSFRRP*EPPNRD
Trigger: GTCCCTGTTTGGGGGCTCCCAGGGTCTCCGAAAGGA...AGACTCCGGCCATTGACCCAGCCCCAGGGCATGGGCTGGTCTTTTGTACAGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR CCA 90 bp AAAAGACCAGCCCATGCCCTGGGGCTGGGTCAATGGCCGGAGTCTCAGGTAGAGAGGCATGCGGCCTGCTaGAGCCTTGCGTCGTTCTCT +
Preference number: 4 (lower is better)
Translates to: KRPAHALGLGQWPESQVERHAAC*SLASFS
Trigger: AGAGAACGACGCAAGGCTCCAGCAGGCCGCATGCCT...CTCTACCTGAGACTCCGGCCATTGACCCAGCCCCAGGGCATGGGCTGGTCTTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR CCA 90 bp CCTCTGTACAAAAGACCAGCCCATGCCCTGGGGCTGGGTCAATGGCCGGAGTCTCTGGGGCTGGGTCAATaGCCGGAGTCTCAGGTAGAG +
Preference number: 4 (lower is better)
Translates to: PLYKRPAHALGLGQWPESLGLGQ*PESQVE
Trigger: CTCTACCTGAGACTCCGGCCATTGACCCAGCCCCAG...AGACTCCGGCCATTGACCCAGCCCCAGGGCATGGGCTGGTCTTTTGTACAGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR CCA 90 bp CAGTGCCTCTTGACGCAGAAGTGCCGAGCAGCTGACCGGCAGCGAGGCCTGGAGTGGCCCTTTTGTAGGTaGCCACCTAGTTTGGCTCAG +
Preference number: 4 (lower is better)
Translates to: QCLLTQKCRAADRQRGLEWPFCR*PPSLAQ
Trigger: CTGAGCCAAACTAGGTGGCCACCTACAAAAGGGCCA...CTCCAGGCCTCGCTGCCGGTCAGCTGCTCGGCACTTCTGCGTCAAGAGGCACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR CCA 90 bp CCTCTGTACAAAAGACCAGCCCATGCCCTGGGGCTGGGTCAATGGCCGGAGTCTGCTGGTCCCGCTCTCTaGGAAGATCGCCTTGAGGAC +
Preference number: 4 (lower is better)
Translates to: PLYKRPAHALGLGQWPESAGPAL*EDRLED
Trigger: GTCCTCAAGGCGATCTTCCCAGAGAGCGGGACCAGC...AGACTCCGGCCATTGACCCAGCCCCAGGGCATGGGCTGGTCTTTTGTACAGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327979.8
CDS-3UTR TCA 90 bp CCGGCAGCGAGGCCTGGAGTTCTACACACTTGCCTTGGAGCCTTTTATTTAGGGGGCTCTGTGCACTGCTaGAGCCTGCGAAGGAGGCGC +
Preference number: 4 (lower is better)
Translates to: PAARPGVLHTCLGAFYLGGSVHC*SLRRRR
Trigger: GCGCCTCCTTCGCAGGCTTCAGCAGTGCACAGAGCC...CCCTAAATAAAAGGCTCCAAGGCAAGTGTGTAGAACTCCAGGCCTCGCTGCCGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR TCA 90 bp CTCAACTTGCCTGGCCTTGGCCCTTTTGTAGGTGGCCACCTAGTTTGGCTCAGCCAGGAAGCCCACATCTaGGGTGGACGCCGACGTGCT +
Preference number: 4 (lower is better)
Translates to: LNLPGLGPFVGGHLVWLSQEAHI*GGRRRA
Trigger: AGCACGTCGGCGTCCACCTCAGATGTGGGCTTCCTG...GCTGAGCCAAACTAGGTGGCCACCTACAAAAGGGCCAAGGCCAGGCAAGTTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR TCA 90 bp CCGGCAGCGAGGCCTGGAGTTCTACACACTTGCCTTGGAGCCTTTTATTTAGGGACCAGCCGCCGTCTGTaGGCTCCACCAGCACTCGCA +
Preference number: 4 (lower is better)
Translates to: PAARPGVLHTCLGAFYLGTSRRL*APPALA
Trigger: TGCGAGTGCTGGTGGAGCTCACAGACGGCGGCTGGT...CCCTAAATAAAAGGCTCCAAGGCAAGTGTGTAGAACTCCAGGCCTCGCTGCCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR GCA 90 bp GGCCTTGGCCCTTTTGTAGGTGGCCACCTAGTTTGGCTCAGCTCTGCATCTCGGAGTCTGTCCGCTCACTaGTGGCCAAAGCTGCCCTGC +
Preference number: 4 (lower is better)
Translates to: GLGPFVGGHLVWLSSASRSLSAH*WPKLPC
Trigger: GCAGGGCAGCTTTGGCCAGCAGTGAGCGGACAGACT...CCGAGATGCAGAGCTGAGCCAAACTAGGTGGCCACCTACAAAAGGGCCAAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000045083.6
CDS-3UTR GCA 90 bp GGCTCCTGGGCTGATGTGGTGGCTTCTTCCCTTTGTGCTGCTGAACATAGGGAACTGGGGCTTCGGGTCTaGACAGACCGACCCCTTCCG +
Preference number: 4 (lower is better)
Translates to: GSWADVVASSLCAAEHRELGLRV*TDRPLP
Trigger: CGGAAGGGGTCGGTCTGTGCAGACCCGAAGCCCCAG...TTCCCTATGTTCAGCAGCACAAAGGGAAGAAGCCACCACATCAGCCCAGGAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR GCA 90 bp CCGGCAGCGAGGCCTGGAGTTCTACACACTTGCCTTGGAGCCTTTTATTTAGGGCTGGGGCTTCGGGTCTaGACAGACCGACCCCTTCCG +
Preference number: 4 (lower is better)
Translates to: PAARPGVLHTCLGAFYLGLGLRV*TDRPLP
Trigger: CGGAAGGGGTCGGTCTGTGCAGACCCGAAGCCCCAG...CCCTAAATAAAAGGCTCCAAGGCAAGTGTGTAGAACTCCAGGCCTCGCTGCCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR GCA 90 bp GGCTCCTGGGCTGATGTGGTGGCTTCTTCCCTTTGTGCTGCTGAACATAGGGAACCCGGAAGCTGGGGGTaGTCGGGGGTGTCCAGTTGT +
Preference number: 4 (lower is better)
Translates to: GSWADVVASSLCAAEHREPGSWG*SGVSSC
Trigger: ACAACTGGACACCCCCGAGCACCCCCAGCTTCCGGG...TTCCCTATGTTCAGCAGCACAAAGGGAAGAAGCCACCACATCAGCCCAGGAGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR GCA 90 bp GGCTCCTGGGCTGATGTGGTGGCTTCTTCCCTTTGTGCTGCTGAACATAGGGAACCCAGCCGCTTCCCCTaGAGCTTCCGGACCACCTTG +
Preference number: 4 (lower is better)
Translates to: GSWADVVASSLCAAEHREPSRFP*SFRTTL
Trigger: CAAGGTGGTCCGGAAGCTGCAGGGGAAGCGGCTGGG...TTCCCTATGTTCAGCAGCACAAAGGGAAGAAGCCACCACATCAGCCCAGGAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR GCA 90 bp CTGCATCCCCAGTGCCTCTTGACGCAGAAGTGCCGAGCAGCTGACCGGCAGCGAGTGCAGCCCCTGGAATaGTGTACCTTTGCCTTGCTT +
Preference number: 4 (lower is better)
Translates to: LHPQCLLTQKCRAADRQRVQPLE*CTFALL
Trigger: AAGCAAGGCAAAGGTACAGCATTCCAGGGGCTGCAC...TCGCTGCCGGTCAGCTGCTCGGCACTTCTGCGTCAAGAGGCACTGGGGATGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR GCA 90 bp AAAAGACCAGCCCATGCCCTGGGGCTGGGTCAATGGCCGGAGTCTCAGGTAGAGCTGCTGCATCCCCAGTaGCTCTTGACGCAGAAGTGC +
Preference number: 4 (lower is better)
Translates to: KRPAHALGLGQWPESQVELLHPQ*LLTQKC
Trigger: GCACTTCTGCGTCAAGAGGCACTGGGGATGCAGCAG...CTCTACCTGAGACTCCGGCCATTGACCCAGCCCCAGGGCATGGGCTGGTCTTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR GCA 90 bp AAAAGACCAGCCCATGCCCTGGGGCTGGGTCAATGGCCGGAGTCTCAGGTAGAGTGGCCTGAGCAGTCTTaGATTAGCAGGGCCAGCCAC +
Preference number: 4 (lower is better)
Translates to: KRPAHALGLGQWPESQVEWPEQS*ISRASH
Trigger: GTGGCTGGCCCTGCTAATGCAAGACTGCTCAGGCCA...CTCTACCTGAGACTCCGGCCATTGACCCAGCCCCAGGGCATGGGCTGGTCTTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR GCA 90 bp GGCCTTGGCCCTTTTGTAGGTGGCCACCTAGTTTGGCTCAGCTCTGCATCTCGGAGTGAGTGGCCCTACTaGCTGTGCTGCTCAGGGCTC +
Preference number: 4 (lower is better)
Translates to: GLGPFVGGHLVWLSSASRSEWPY*LCCSGL
Trigger: GAGCCCTGAGCAGCACAGGCAGTAGGGCCACTCACT...CCGAGATGCAGAGCTGAGCCAAACTAGGTGGCCACCTACAAAAGGGCCAAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR GCA 90 bp CTGCATCCCCAGTGCCTCTTGACGCAGAAGTGCCGAGCAGCTGACCGGCAGCGAGCTGGGTTGATTGATTaGATTTGGGTGCGGATGGCC +
Preference number: 4 (lower is better)
Translates to: LHPQCLLTQKCRAADRQRAGLID*IWVRMA
Trigger: GGCCATCCGCACCCAAATGCAATCAATCAACCCAGC...TCGCTGCCGGTCAGCTGCTCGGCACTTCTGCGTCAAGAGGCACTGGGGATGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR GCA 90 bp GGCTCCTGGGCTGATGTGGTGGCTTCTTCCCTTTGTGCTGCTGAACATAGGGAATGGCCTGTGTCAGGGTaGAGGCGGCCATGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: GSWADVVASSLCAAEHREWPVSG*RRPWSW
Trigger: CCAGCTCCATGGCCGCCTGCACCCTGACACAGGCCA...TTCCCTATGTTCAGCAGCACAAAGGGAAGAAGCCACCACATCAGCCCAGGAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327979.8
CDS-3UTR GCA 90 bp CCTCTGTACAAAAGACCAGCCCATGCCCTGGGGCTGGGTCAATGGCCGGAGTCTCGCCCTCCTTGCAGCTaGCTCACTTTCCCTATTGCC +
Preference number: 4 (lower is better)
Translates to: PLYKRPAHALGLGQWPESRPPCS*LTFPIA
Trigger: GGCAATAGGGAAAGTGAGGCAGCTGCAAGGAGGGCG...AGACTCCGGCCATTGACCCAGCCCCAGGGCATGGGCTGGTCTTTTGTACAGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327979.8
CDS-3UTR CCA 90 bp TGGGCAGCTCACACTCCTGGAGGAGTGCACAGCACCATTACCCAGAGTGCAGGCCTCCTGGTGTCTTTGTaGCGTCCAGACAGGTGGTCC +
Preference number: 4 (lower is better)
Translates to: WAAHTPGGVHSTITQSAGLLVSL*RPDRWS
Trigger: GGACCACCTGTCTGGACGCCACAAAGACACCAGGAG...GCCTGCACTCTGGGTAATGGTGCTGTGCACTCCTCCAGGAGTGTGAGCTGCCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR CCA 90 bp GGCTCCTGGGCTGATGTGGTGGCTTCTTCCCTTTGTGCTGCTGAACATAGGGAAATCTCTCCCGGAAGCTaGGGGTGCTCGGGGGTGTCC +
Preference number: 4 (lower is better)
Translates to: GSWADVVASSLCAAEHREISPGS*GCSGVS
Trigger: GGACACCCCCGAGCACCCCCAGCTTCCGGGAGAGAT...TTCCCTATGTTCAGCAGCACAAAGGGAAGAAGCCACCACATCAGCCCAGGAGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR CCA 90 bp CCGGCAGCGAGGCCTGGAGTTCTACACACTTGCCTTGGAGCCTTTTATTTAGGGTGGACGCCGACGTGCTaGTCTCCGTGTCTCGGGGGT +
Preference number: 4 (lower is better)
Translates to: PAARPGVLHTCLGAFYLGWTPTC*SPCLGG
Trigger: ACCCCCGAGACACGGAGACCAGCACGTCGGCGTCCA...CCCTAAATAAAAGGCTCCAAGGCAAGTGTGTAGAACTCCAGGCCTCGCTGCCGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR CCA 90 bp TTAGGGCCTCAACTTGCCTGGCCTTGGCCCTTTTGTAGGTGGCCACCTAGTTTGTGGACGCCGACGTGCTaGTCTCCGTGTCTCGGGGGT +
Preference number: 4 (lower is better)
Translates to: LGPQLAWPWPFCRWPPSLWTPTC*SPCLGG
Trigger: ACCCCCGAGACACGGAGACCAGCACGTCGGCGTCCA...CAAACTAGGTGGCCACCTACAAAAGGGCCAAGGCCAGGCAAGTTGAGGCCCTAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR CCA 90 bp CCGGCAGCGAGGCCTGGAGTTCTACACACTTGCCTTGGAGCCTTTTATTTAGGGGAGGTGGGCCATCTCTaGCAGGAGACCTGGGGGCAG +
Preference number: 4 (lower is better)
Translates to: PAARPGVLHTCLGAFYLGEVGHL*QETWGQ
Trigger: CTGCCCCCAGGTCTCCTGCCAGAGATGGCCCACCTC...CCCTAAATAAAAGGCTCCAAGGCAAGTGTGTAGAACTCCAGGCCTCGCTGCCGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR CCA 90 bp GGCCTTGGCCCTTTTGTAGGTGGCCACCTAGTTTGGCTCAGCTCTGCATCTCGGTCCTTTCGGAGACCCTaGGAGCCCCCAAACAGGGAC +
Preference number: 4 (lower is better)
Translates to: GLGPFVGGHLVWLSSASRSFRRP*EPPNRD
Trigger: GTCCCTGTTTGGGGGCTCCCAGGGTCTCCGAAAGGA...CCGAGATGCAGAGCTGAGCCAAACTAGGTGGCCACCTACAAAAGGGCCAAGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR CCA 90 bp GGCTCCTGGGCTGATGTGGTGGCTTCTTCCCTTTGTGCTGCTGAACATAGGGAAGGTTCAGCAGCGTCGTaGCAGGGCAGGACAGGACCC +
Preference number: 4 (lower is better)
Translates to: GSWADVVASSLCAAEHREGSAAS*QGRTGP
Trigger: GGGTCCTGTCCTGCCCTGCCACGACGCTGCTGAACC...TTCCCTATGTTCAGCAGCACAAAGGGAAGAAGCCACCACATCAGCCCAGGAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR CCA 90 bp CAGTGCCTCTTGACGCAGAAGTGCCGAGCAGCTGACCGGCAGCGAGGCCTGGAGAAGGTTTTCTTGAGCTaGTTCAGCAGCGTCGTGGCA +
Preference number: 4 (lower is better)
Translates to: QCLLTQKCRAADRQRGLEKVFLS*FSSVVA
Trigger: TGCCACGACGCTGCTGAACCAGCTCAAGAAAACCTT...CTCCAGGCCTCGCTGCCGGTCAGCTGCTCGGCACTTCTGCGTCAAGAGGCACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR CCA 90 bp GCCGCCGTCTGTGAGCTCCACCAGCACTCGCAGCAAGTCAGTCGGGCTGAGAGTTCTCTGCCAGGGCGTTaGTGTAGAACAGCAAAGCCT +
Preference number: 4 (lower is better)
Translates to: AAVCELHQHSQQVSRAESSLPGR*CRTAKP
Trigger: AGGCTTTGCTGTTCTACACCAACGCCCTGGCAGAGA...ACTCTCAGCCCGACTGACTTGCTGCGAGTGCTGGTGGAGCTCACAGACGGCGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR CCA 90 bp GTGCACAGCACCATTACCCAGAGTGCAGGCTATGTCCAGGCTGGGCAGCAGCAACTGGGGCTGGGTCAATaGCCGGAGTCTCAGGTAGAG +
Preference number: 4 (lower is better)
Translates to: VHSTITQSAGYVQAGQQQLGLGQ*PESQVE
Trigger: CTCTACCTGAGACTCCGGCCATTGACCCAGCCCCAG...TTGCTGCTGCCCAGCCTGGACATAGCCTGCACTCTGGGTAATGGTGCTGTGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR CCA 90 bp CCTCTGTACAAAAGACCAGCCCATGCCCTGGGGCTGGGTCAATGGCCGGAGTCTAGGCCGTGCAGCCCCTaGAATGCTGTACCTTTGCCT +
Preference number: 4 (lower is better)
Translates to: PLYKRPAHALGLGQWPESRPCSP*NAVPLP
Trigger: AGGCAAAGGTACAGCATTCCAGGGGCTGCACGGCCT...AGACTCCGGCCATTGACCCAGCCCCAGGGCATGGGCTGGTCTTTTGTACAGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR CCA 90 bp AAAAGACCAGCCCATGCCCTGGGGCTGGGTCAATGGCCGGAGTCTCAGGTAGAGGGTGGCCACCTAGTTTaGCTCAGCTCTGCATCTCGG +
Preference number: 4 (lower is better)
Translates to: KRPAHALGLGQWPESQVEGGHLV*LSSASR
Trigger: CCGAGATGCAGAGCTGAGCCAAACTAGGTGGCCACC...CTCTACCTGAGACTCCGGCCATTGACCCAGCCCCAGGGCATGGGCTGGTCTTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
3UTR CAA 72 bp GCCTGGCCTTGGCCCTTTTGTAGGTGGCCACCTAGTTaGGCTCAGCTCTGCATCTCGGGGAAGGTCACACAG +
Preference number: 4 (lower is better)
Translates to: AWPWPFCRWPPS*AQLCISGKVTQ
Trigger: CTGTGTGACCTTCCCCGAGATGCAGAGCTGAGCCAAACTAGGTGGCCACCTACAAAAGGGCCAAGGCCAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR TCA 90 bp CCGGCAGCGAGGCCTGGAGTTCTACACACTTGCCTTGGAGCCTTTTATTTAGGGACTCGATCCGACCCTTaGGCTTCCAACGCTGGCGGC +
Preference number: 4 (lower is better)
Translates to: PAARPGVLHTCLGAFYLGTRSDP*ASNAGG
Trigger: GCCGCCAGCGTTGGAAGCTCAAGGGTCGGATCGAGT...CCCTAAATAAAAGGCTCCAAGGCAAGTGTGTAGAACTCCAGGCCTCGCTGCCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR TCA 90 bp GTGCACAGCACCATTACCCAGAGTGCAGGCTATGTCCAGGCTGGGCAGCAGCAACATGCAGCGTGGGGATaGAGGCCTTCTCCTCTTCGT +
Preference number: 4 (lower is better)
Translates to: VHSTITQSAGYVQAGQQQHAAWG*RPSPLR
Trigger: ACGAAGAGGAGAAGGCCTTCATCCCCACGCTGCATG...TTGCTGCTGCCCAGCCTGGACATAGCCTGCACTCTGGGTAATGGTGCTGTGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR TCA 90 bp CTCAACTTGCCTGGCCTTGGCCCTTTTGTAGGTGGCCACCTAGTTTGGCTCAGCGGGGGTCCTCAGAGCTaGAGGAGTCCATCTCAGGCA +
Preference number: 4 (lower is better)
Translates to: LNLPGLGPFVGGHLVWLSGGPQS*RSPSQA
Trigger: TGCCTGAGATGGACTCCTTCAGCTCTGAGGACCCCC...GCTGAGCCAAACTAGGTGGCCACCTACAAAAGGGCCAAGGCCAGGCAAGTTGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR TCA 90 bp GGCTCCTGGGCTGATGTGGTGGCTTCTTCCCTTTGTGCTGCTGAACATAGGGAACAGGAAGCCCACATCTaGGGTGGACGCCGACGTGCT +
Preference number: 4 (lower is better)
Translates to: GSWADVVASSLCAAEHREQEAHI*GGRRRA
Trigger: AGCACGTCGGCGTCCACCTCAGATGTGGGCTTCCTG...TTCCCTATGTTCAGCAGCACAAAGGGAAGAAGCCACCACATCAGCCCAGGAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR TCA 90 bp TTAGGGCCTCAACTTGCCTGGCCTTGGCCCTTTTGTAGGTGGCCACCTAGTTTGCTGGGGCACCGGCTGTaGGTTCCCTGGATGACGCTT +
Preference number: 4 (lower is better)
Translates to: LGPQLAWPWPFCRWPPSLLGHRL*VPWMTL
Trigger: AAGCGTCATCCAGGGAACTCACAGCCGGTGCCCCAG...CAAACTAGGTGGCCACCTACAAAAGGGCCAAGGCCAGGCAAGTTGAGGCCCTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR TCA 90 bp CTCAACTTGCCTGGCCTTGGCCCTTTTGTAGGTGGCCACCTAGTTTGGCTCAGCTGCGGATGGCCAAAGTaGGTGGCCCTACTGCCTGTG +
Preference number: 4 (lower is better)
Translates to: LNLPGLGPFVGGHLVWLSCGWPK*VALLPV
Trigger: CACAGGCAGTAGGGCCACTCACTTTGGCCATCCGCA...GCTGAGCCAAACTAGGTGGCCACCTACAAAAGGGCCAAGGCCAGGCAAGTTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR GCA 90 bp CCTCTGTACAAAAGACCAGCCCATGCCCTGGGGCTGGGTCAATGGCCGGAGTCTCCTGTTGATGGACTTTaGGATCCTCCGGCTCTGTGC +
Preference number: 4 (lower is better)
Translates to: PLYKRPAHALGLGQWPESPVDGL*DPPALC
Trigger: GCACAGAGCCGGAGGATCGCAAAGTCCATCAACAGG...AGACTCCGGCCATTGACCCAGCCCCAGGGCATGGGCTGGTCTTTTGTACAGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR GCA 90 bp CAGTGCCTCTTGACGCAGAAGTGCCGAGCAGCTGACCGGCAGCGAGGCCTGGAGCATCTTGGAGGATTTTaGAGGCATTCGCGATCTCAC +
Preference number: 4 (lower is better)
Translates to: QCLLTQKCRAADRQRGLEHLGGF*RHSRSH
Trigger: GTGAGATCGCGAATGCCTGCAAAATCCTCCAAGATG...CTCCAGGCCTCGCTGCCGGTCAGCTGCTCGGCACTTCTGCGTCAAGAGGCACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR GCA 90 bp TGGGCAGCTCACACTCCTGGAGGAGTGCACAGCACCATTACCCAGAGTGCAGGCCACTGCACCTCCAGCTaGAGCTTGATGGTACCCAAC +
Preference number: 4 (lower is better)
Translates to: WAAHTPGGVHSTITQSAGHCTSS*SLMVPN
Trigger: GTTGGGTACCATCAAGCTGCAGCTGGAGGTGCAGTG...GCCTGCACTCTGGGTAATGGTGCTGTGCACTCCTCCAGGAGTGTGAGCTGCCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR GCA 90 bp AAAAGACCAGCCCATGCCCTGGGGCTGGGTCAATGGCCGGAGTCTCAGGTAGAGCACTGCACCTCCAGCTaGAGCTTGATGGTACCCAAC +
Preference number: 4 (lower is better)
Translates to: KRPAHALGLGQWPESQVEHCTSS*SLMVPN
Trigger: GTTGGGTACCATCAAGCTGCAGCTGGAGGTGCAGTG...CTCTACCTGAGACTCCGGCCATTGACCCAGCCCCAGGGCATGGGCTGGTCTTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR GCA 90 bp CTCAACTTGCCTGGCCTTGGCCCTTTTGTAGGTGGCCACCTAGTTTGGCTCAGCCCTGCTCCAGGAGCCTaGGGCACGCTATTTCCAGCT +
Preference number: 4 (lower is better)
Translates to: LNLPGLGPFVGGHLVWLSPAPGA*GTLFPA
Trigger: AGCTGGAAATAGCGTGCCGCAGGCTCCTGGAGCAGG...GCTGAGCCAAACTAGGTGGCCACCTACAAAAGGGCCAAGGCCAGGCAAGTTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR GCA 90 bp CCTCTGTACAAAAGACCAGCCCATGCCCTGGGGCTGGGTCAATGGCCGGAGTCTCACCATTACCCAGAGTaGAGGCTATGTCCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: PLYKRPAHALGLGQWPESHHYPE*RLCPGW
Trigger: CCAGCCTGGACATAGCCTGCACTCTGGGTAATGGTG...AGACTCCGGCCATTGACCCAGCCCCAGGGCATGGGCTGGTCTTTTGTACAGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR GCA 90 bp GGCCTTGGCCCTTTTGTAGGTGGCCACCTAGTTTGGCTCAGCTCTGCATCTCGGGAAACCCTGGCTTTGTaGCTTCCCACCTTCCCCAGC +
Preference number: 4 (lower is better)
Translates to: GLGPFVGGHLVWLSSASRETLAL*LPTFPS
Trigger: GCTGGGGAAGGTGGGAAGGCACAAAGCCAGGGTTTC...CCGAGATGCAGAGCTGAGCCAAACTAGGTGGCCACCTACAAAAGGGCCAAGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR GCA 90 bp CCGGCAGCGAGGCCTGGAGTTCTACACACTTGCCTTGGAGCCTTTTATTTAGGGTCCCGCCGCCCTCCTTaGAGCTGCCTCACTTTCCCT +
Preference number: 4 (lower is better)
Translates to: PAARPGVLHTCLGAFYLGSRRPP*SCLTFP
Trigger: AGGGAAAGTGAGGCAGCTGCAAGGAGGGCGGCGGGA...CCCTAAATAAAAGGCTCCAAGGCAAGTGTGTAGAACTCCAGGCCTCGCTGCCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327979.8
CDS-3UTR CCA 90 bp GGCTCCTGGGCTGATGTGGTGGCTTCTTCCCTTTGTGCTGCTGAACATAGGGAACTGTCCGCTCACTGCTaGCCAAAGCTGCCCTGCGTC +
Preference number: 4 (lower is better)
Translates to: GSWADVVASSLCAAEHRELSAHC*PKLPCV
Trigger: GACGCAGGGCAGCTTTGGCCAGCAGTGAGCGGACAG...TTCCCTATGTTCAGCAGCACAAAGGGAAGAAGCCACCACATCAGCCCAGGAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000045083.6
CDS-3UTR CCA 90 bp TTAGGGCCTCAACTTGCCTGGCCTTGGCCCTTTTGTAGGTGGCCACCTAGTTTGGATGCTCCCAGACACTaGGGACTGTCCTGGGCCTCC +
Preference number: 4 (lower is better)
Translates to: LGPQLAWPWPFCRWPPSLDAPRH*GLSWAS
Trigger: GGAGGCCCAGGACAGTCCCCAGTGTCTGGGAGCATC...CAAACTAGGTGGCCACCTACAAAAGGGCCAAGGCCAGGCAAGTTGAGGCCCTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000045083.6
CDS-3UTR CCA 90 bp CCTCTGTACAAAAGACCAGCCCATGCCCTGGGGCTGGGTCAATGGCCGGAGTCTGCAACCTCACCGACATaGTGGTCACCTTTGGTGGCA +
Preference number: 4 (lower is better)
Translates to: PLYKRPAHALGLGQWPESATSPT*WSPLVA
Trigger: TGCCACCAAAGGTGACCACCATGTCGGTGAGGTTGC...AGACTCCGGCCATTGACCCAGCCCCAGGGCATGGGCTGGTCTTTTGTACAGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000045083.6
CDS-3UTR CCA 90 bp CCTCTGTACAAAAGACCAGCCCATGCCCTGGGGCTGGGTCAATGGCCGGAGTCTATCTTCTTCACCTGCTaGGGCTTCGGGTCTGCACAG +
Preference number: 4 (lower is better)
Translates to: PLYKRPAHALGLGQWPESIFFTC*GFGSAQ
Trigger: CTGTGCAGACCCGAAGCCCCAGCAGGTGAAGAAGAT...AGACTCCGGCCATTGACCCAGCCCCAGGGCATGGGCTGGTCTTTTGTACAGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR CCA 90 bp GGCTCCTGGGCTGATGTGGTGGCTTCTTCCCTTTGTGCTGCTGAACATAGGGAATGGCGTCCAGACAGGTaGTCCAGCTCAGCCTGCTGC +
Preference number: 4 (lower is better)
Translates to: GSWADVVASSLCAAEHREWRPDR*SSSACC
Trigger: GCAGCAGGCTGAGCTGGACCACCTGTCTGGACGCCA...TTCCCTATGTTCAGCAGCACAAAGGGAAGAAGCCACCACATCAGCCCAGGAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR CCA 90 bp GTGCACAGCACCATTACCCAGAGTGCAGGCTATGTCCAGGCTGGGCAGCAGCAATCTTCAATGGAGGCGTaGGGACCGAAGGTCAAGGGC +
Preference number: 4 (lower is better)
Translates to: VHSTITQSAGYVQAGQQQSSMEA*GPKVKG
Trigger: GCCCTTGACCTTCGGTCCCCACGCCTCCATTGAAGA...TTGCTGCTGCCCAGCCTGGACATAGCCTGCACTCTGGGTAATGGTGCTGTGCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR CCA 90 bp TTAGGGCCTCAACTTGCCTGGCCTTGGCCCTTTTGTAGGTGGCCACCTAGTTTGGGGCCTCCAGAGAGGTaGGCCATCTCTGGCAGGAGA +
Preference number: 4 (lower is better)
Translates to: LGPQLAWPWPFCRWPPSLGPPER*AISGRR
Trigger: TCTCCTGCCAGAGATGGCCCACCTCTCTGGAGGCCC...CAAACTAGGTGGCCACCTACAAAAGGGCCAAGGCCAGGCAAGTTGAGGCCCTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR CCA 90 bp TTAGGGCCTCAACTTGCCTGGCCTTGGCCCTTTTGTAGGTGGCCACCTAGTTTGCAGCACGTCCAGCTCTaGGGCACCGGCTGTGAGTTC +
Preference number: 4 (lower is better)
Translates to: LGPQLAWPWPFCRWPPSLQHVQL*GTGCEF
Trigger: GAACTCACAGCCGGTGCCCCAGAGCTGGACGTGCTG...CAAACTAGGTGGCCACCTACAAAAGGGCCAAGGCCAGGCAAGTTGAGGCCCTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR CCA 90 bp TCTGCCTCTGTACAAAAGACCAGCCCATGCCCTGGGGCTGGGTCAATGGCCGGACGTCCGCGAGGCCTGTaGGATGATCTCTTCAATGGA +
Preference number: 4 (lower is better)
Translates to: SASVQKTSPCPGAGSMAGRPRGL*DDLFNG
Trigger: TCCATTGAAGAGATCATCCCACAGGCCTCGCGGACG...TCCGGCCATTGACCCAGCCCCAGGGCATGGGCTGGTCTTTTGTACAGAGGCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR CCA 90 bp TGGGCAGCTCACACTCCTGGAGGAGTGCACAGCACCATTACCCAGAGTGCAGGCAATGATCTGTTCTTCTaGGAGCCCAGCTCCGGGGAG +
Preference number: 4 (lower is better)
Translates to: WAAHTPGGVHSTITQSAGNDLFF*EPSSGE
Trigger: CTCCCCGGAGCTGGGCTCCCAGAAGAACAGATCATT...GCCTGCACTCTGGGTAATGGTGCTGTGCACTCCTCCAGGAGTGTGAGCTGCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR CCA 90 bp TGGGCAGCTCACACTCCTGGAGGAGTGCACAGCACCATTACCCAGAGTGCAGGCCAACTTGCCTGGCCTTaGCCCTTTTGTAGGTGGCCA +
Preference number: 4 (lower is better)
Translates to: WAAHTPGGVHSTITQSAGQLAWP*PFCRWP
Trigger: TGGCCACCTACAAAAGGGCCAAGGCCAGGCAAGTTG...GCCTGCACTCTGGGTAATGGTGCTGTGCACTCCTCCAGGAGTGTGAGCTGCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR CCA 90 bp GCCGCCGTCTGTGAGCTCCACCAGCACTCGCAGCAAGTCAGTCGGGCTGAGAGTTGGCTGCTGCTGAAATaGCCTGAGCAGTCTTGCATT +
Preference number: 4 (lower is better)
Translates to: AAVCELHQHSQQVSRAESWLLLK*PEQSCI
Trigger: AATGCAAGACTGCTCAGGCCATTTCAGCAGCAGCCA...ACTCTCAGCCCGACTGACTTGCTGCGAGTGCTGGTGGAGCTCACAGACGGCGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR CCA 90 bp CTGCATCCCCAGTGCCTCTTGACGCAGAAGTGCCGAGCAGCTGACCGGCAGCGATGGCTGCTGCTGAAATaGCCTGAGCAGTCTTGCATT +
Preference number: 4 (lower is better)
Translates to: LHPQCLLTQKCRAADRQRWLLLK*PEQSCI
Trigger: AATGCAAGACTGCTCAGGCCATTTCAGCAGCAGCCA...TCGCTGCCGGTCAGCTGCTCGGCACTTCTGCGTCAAGAGGCACTGGGGATGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR TCA 90 bp GCCGCCGTCTGTGAGCTCCACCAGCACTCGCAGCAAGTCAGTCGGGCTGAGAGTTCCACCTTGCTGATGTaGAACTCCATCTTCCGAATG +
Preference number: 4 (lower is better)
Translates to: AAVCELHQHSQQVSRAESSTLLM*NSIFRM
Trigger: CATTCGGAAGATGGAGTTTCACATCAGCAAGGTGGA...ACTCTCAGCCCGACTGACTTGCTGCGAGTGCTGGTGGAGCTCACAGACGGCGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR TCA 90 bp CTCAACTTGCCTGGCCTTGGCCCTTTTGTAGGTGGCCACCTAGTTTGGCTCAGCTGTCAGACAGGTAGCTaGGGATGGAGGTGGCCCTTG +
Preference number: 4 (lower is better)
Translates to: LNLPGLGPFVGGHLVWLSCQTGS*GWRWPL
Trigger: CAAGGGCCACCTCCATCCTCAGCTACCTGTCTGACA...GCTGAGCCAAACTAGGTGGCCACCTACAAAAGGGCCAAGGCCAGGCAAGTTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR TCA 90 bp CCGGCAGCGAGGCCTGGAGTTCTACACACTTGCCTTGGAGCCTTTTATTTAGGGGCCTGTCCCGCACAGTaGAGCTCCTCGATGAGTGTC +
Preference number: 4 (lower is better)
Translates to: PAARPGVLHTCLGAFYLGACPAQ*SSSMSV
Trigger: GACACTCATCGAGGAGCTTCACTGTGCGGGACAGGC...CCCTAAATAAAAGGCTCCAAGGCAAGTGTGTAGAACTCCAGGCCTCGCTGCCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR GCA 90 bp CTCAACTTGCCTGGCCTTGGCCCTTTTGTAGGTGGCCACCTAGTTTGGCTCAGCGATCCTCCGGCTCTGTaGACTGCTGAAGCCTGCGAA +
Preference number: 4 (lower is better)
Translates to: LNLPGLGPFVGGHLVWLSDPPAL*TAEACE
Trigger: TTCGCAGGCTTCAGCAGTGCACAGAGCCGGAGGATC...GCTGAGCCAAACTAGGTGGCCACCTACAAAAGGGCCAAGGCCAGGCAAGTTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR GCA 90 bp TGGGCAGCTCACACTCCTGGAGGAGTGCACAGCACCATTACCCAGAGTGCAGGCTCCAGCTCAGCCTGCTaGACACACAGATACTCCTTG +
Preference number: 4 (lower is better)
Translates to: WAAHTPGGVHSTITQSAGSSSAC*THRYSL
Trigger: CAAGGAGTATCTGTGTGTGCAGCAGGCTGAGCTGGA...GCCTGCACTCTGGGTAATGGTGCTGTGCACTCCTCCAGGAGTGTGAGCTGCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR GCA 90 bp GGCTCCTGGGCTGATGTGGTGGCTTCTTCCCTTTGTGCTGCTGAACATAGGGAATCCGGGACAGAGGCGTaGGTAGCCCACCAAGCCTTT +
Preference number: 4 (lower is better)
Translates to: GSWADVVASSLCAAEHRESGTEA*VAHQAF
Trigger: AAAGGCTTGGTGGGCTACGCACGCCTCTGTCCCGGA...TTCCCTATGTTCAGCAGCACAAAGGGAAGAAGCCACCACATCAGCCCAGGAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR GCA 90 bp CCGGCAGCGAGGCCTGGAGTTCTACACACTTGCCTTGGAGCCTTTTATTTAGGGTCCACCACGATGACCTaGGGCCGCGTCGTGAAGAAG +
Preference number: 4 (lower is better)
Translates to: PAARPGVLHTCLGAFYLGSTTMT*GRVVKK
Trigger: CTTCTTCACGACGCGGCCGCAGGTCATCGTGGTGGA...CCCTAAATAAAAGGCTCCAAGGCAAGTGTGTAGAACTCCAGGCCTCGCTGCCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR GCA 90 bp CCGGCAGCGAGGCCTGGAGTTCTACACACTTGCCTTGGAGCCTTTTATTTAGGGCCCAGCAGCAAGGCCTaGTGTGTTGGCTGCTGTAGG +
Preference number: 4 (lower is better)
Translates to: PAARPGVLHTCLGAFYLGPSSKA*CVGCCR
Trigger: CCTACAGCAGCCAACACAGCAGGCCTTGCTGCTGGG...CCCTAAATAAAAGGCTCCAAGGCAAGTGTGTAGAACTCCAGGCCTCGCTGCCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR GCA 90 bp CCGGCAGCGAGGCCTGGAGTTCTACACACTTGCCTTGGAGCCTTTTATTTAGGGTTCCTCCAGCCAGGCTaGTCTGCAAACGGGCCTCCA +
Preference number: 4 (lower is better)
Translates to: PAARPGVLHTCLGAFYLGFLQPG*SANGPP
Trigger: TGGAGGCCCGTTTGCAGAGCAGCCTGGCTGGAGGAA...CCCTAAATAAAAGGCTCCAAGGCAAGTGTGTAGAACTCCAGGCCTCGCTGCCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR GCA 90 bp GTGCACAGCACCATTACCCAGAGTGCAGGCTATGTCCAGGCTGGGCAGCAGCAAGGGGAGGCCAGTTTCTaGAGCAGAGCTTTGCAGACT +
Preference number: 4 (lower is better)
Translates to: VHSTITQSAGYVQAGQQQGEASF*SRALQT
Trigger: AGTCTGCAAAGCTCTGCTGCAGAAACTGGCCTCCCC...TTGCTGCTGCCCAGCCTGGACATAGCCTGCACTCTGGGTAATGGTGCTGTGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR GCA 90 bp GTGCACAGCACCATTACCCAGAGTGCAGGCTATGTCCAGGCTGGGCAGCAGCAACCTTGCGTCGTTCTCTaGCAGGGCGTTGGTGTAGAA +
Preference number: 4 (lower is better)
Translates to: VHSTITQSAGYVQAGQQQPCVVL*QGVGVE
Trigger: TTCTACACCAACGCCCTGGCAGAGAACGACGCAAGG...TTGCTGCTGCCCAGCCTGGACATAGCCTGCACTCTGGGTAATGGTGCTGTGCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR GCA 90 bp CCTCTGTACAAAAGACCAGCCCATGCCCTGGGGCTGGGTCAATGGCCGGAGTCTGTGCAGCCCCTGGAATaGTGTACCTTTGCCTTGCTT +
Preference number: 4 (lower is better)
Translates to: PLYKRPAHALGLGQWPESVQPLE*CTFALL
Trigger: AAGCAAGGCAAAGGTACAGCATTCCAGGGGCTGCAC...AGACTCCGGCCATTGACCCAGCCCCAGGGCATGGGCTGGTCTTTTGTACAGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR GCA 90 bp CCTCTGTACAAAAGACCAGCCCATGCCCTGGGGCTGGGTCAATGGCCGGAGTCTTTTAGGGCCTCAACTTaGCTGGCCTTGGCCCTTTTG +
Preference number: 4 (lower is better)
Translates to: PLYKRPAHALGLGQWPESFRAST*LALALL
Trigger: CAAAAGGGCCAAGGCCAGGCAAGTTGAGGCCCTAAA...AGACTCCGGCCATTGACCCAGCCCCAGGGCATGGGCTGGTCTTTTGTACAGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR GCA 90 bp TGGGCAGCTCACACTCCTGGAGGAGTGCACAGCACCATTACCCAGAGTGCAGGCCTCGAGCTAGGGCTCTaGAAATTCCATCCACACTGG +
Preference number: 4 (lower is better)
Translates to: WAAHTPGGVHSTITQSAGLELGL*KFHPHW
Trigger: CCAGTGTGGATGGAATTTGCAGAGCCCTAGCTCGAG...GCCTGCACTCTGGGTAATGGTGCTGTGCACTCCTCCAGGAGTGTGAGCTGCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327979.8
CDS-3UTR CCA 90 bp GGCCTTGGCCCTTTTGTAGGTGGCCACCTAGTTTGGCTCAGCTCTGCATCTCGGGCCTGGAATTCCTCCTaGTGTCTTTGTGGCGTCCAG +
Preference number: 4 (lower is better)
Translates to: GLGPFVGGHLVWLSSASRAWNSS*CLCGVQ
Trigger: CTGGACGCCACAAAGACACCAGGAGGAATTCCAGGC...CCGAGATGCAGAGCTGAGCCAAACTAGGTGGCCACCTACAAAAGGGCCAAGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR CCA 90 bp GGCTCCTGGGCTGATGTGGTGGCTTCTTCCCTTTGTGCTGCTGAACATAGGGAATTGAGCTTCCAACGCTaGCGGCCCAGACGCATGAGC +
Preference number: 4 (lower is better)
Translates to: GSWADVVASSLCAAEHRELSFQR*RPRRMS
Trigger: GCTCATGCGTCTGGGCCGCCAGCGTTGGAAGCTCAA...TTCCCTATGTTCAGCAGCACAAAGGGAAGAAGCCACCACATCAGCCCAGGAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR CCA 90 bp CCGGCAGCGAGGCCTGGAGTTCTACACACTTGCCTTGGAGCCTTTTATTTAGGGTCTGGCTTCTTAGGCTaGGACCCCGGAGGTCGCTGT +
Preference number: 4 (lower is better)
Translates to: PAARPGVLHTCLGAFYLGSGFLG*DPGGRC
Trigger: ACAGCGACCTCCGGGGTCCCAGCCTAAGAAGCCAGA...CCCTAAATAAAAGGCTCCAAGGCAAGTGTGTAGAACTCCAGGCCTCGCTGCCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR CCA 90 bp GGCTCCTGGGCTGATGTGGTGGCTTCTTCCCTTTGTGCTGCTGAACATAGGGAATCTGGCTTCTTAGGCTaGGACCCCGGAGGTCGCTGT +
Preference number: 4 (lower is better)
Translates to: GSWADVVASSLCAAEHRESGFLG*DPGGRC
Trigger: ACAGCGACCTCCGGGGTCCCAGCCTAAGAAGCCAGA...TTCCCTATGTTCAGCAGCACAAAGGGAAGAAGCCACCACATCAGCCCAGGAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR CCA 90 bp CCGGCAGCGAGGCCTGGAGTTCTACACACTTGCCTTGGAGCCTTTTATTTAGGGGTTGCCCCTTCCTCGTaGCCGTTCTGGCTACTCGAG +
Preference number: 4 (lower is better)
Translates to: PAARPGVLHTCLGAFYLGVAPSS*PFWLLE
Trigger: CTCGAGTAGCCAGAACGGCCACGAGGAAGGGGCAAC...CCCTAAATAAAAGGCTCCAAGGCAAGTGTGTAGAACTCCAGGCCTCGCTGCCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR CCA 90 bp CAGTGCCTCTTGACGCAGAAGTGCCGAGCAGCTGACCGGCAGCGAGGCCTGGAGTCCAGGAGGCATTCCTaGACCAGCCTTGATAAATTA +
Preference number: 4 (lower is better)
Translates to: QCLLTQKCRAADRQRGLESRRHS*TSLDKL
Trigger: TAATTTATCAAGGCTGGTCCAGGAATGCCTCCTGGA...CTCCAGGCCTCGCTGCCGGTCAGCTGCTCGGCACTTCTGCGTCAAGAGGCACTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR CCA 90 bp CCGGCAGCGAGGCCTGGAGTTCTACACACTTGCCTTGGAGCCTTTTATTTAGGGGCTTCCGGACCACCTTaGCCTGTCCCGCACAGTGAA +
Preference number: 4 (lower is better)
Translates to: PAARPGVLHTCLGAFYLGASGPP*PVPHSE
Trigger: TTCACTGTGCGGGACAGGCCAAGGTGGTCCGGAAGC...CCCTAAATAAAAGGCTCCAAGGCAAGTGTGTAGAACTCCAGGCCTCGCTGCCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR CCA 90 bp AAAAGACCAGCCCATGCCCTGGGGCTGGGTCAATGGCCGGAGTCTCAGGTAGAGTCTCTGCCAGGGCGTTaGTGTAGAACAGCAAAGCCT +
Preference number: 4 (lower is better)
Translates to: KRPAHALGLGQWPESQVESLPGR*CRTAKP
Trigger: AGGCTTTGCTGTTCTACACCAACGCCCTGGCAGAGA...CTCTACCTGAGACTCCGGCCATTGACCCAGCCCCAGGGCATGGGCTGGTCTTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR CCA 90 bp GGCTCCTGGGCTGATGTGGTGGCTTCTTCCCTTTGTGCTGCTGAACATAGGGAAAGGCATGCGGCCTGCTaGAGCCTTGCGTCGTTCTCT +
Preference number: 4 (lower is better)
Translates to: GSWADVVASSLCAAEHRERHAAC*SLASFS
Trigger: AGAGAACGACGCAAGGCTCCAGCAGGCCGCATGCCT...TTCCCTATGTTCAGCAGCACAAAGGGAAGAAGCCACCACATCAGCCCAGGAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR CCA 90 bp GGCCTTGGCCCTTTTGTAGGTGGCCACCTAGTTTGGCTCAGCTCTGCATCTCGGCAGACTGGCACAGGCTaGCAGTCTGGTCGATGCTTT +
Preference number: 4 (lower is better)
Translates to: GLGPFVGGHLVWLSSASRQTGTG*QSGRCF
Trigger: AAAGCATCGACCAGACTGCCAGCCTGTGCCAGTCTG...CCGAGATGCAGAGCTGAGCCAAACTAGGTGGCCACCTACAAAAGGGCCAAGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR CCA 90 bp CTCAACTTGCCTGGCCTTGGCCCTTTTGTAGGTGGCCACCTAGTTTGGCTCAGCAGGCCGTGCAGCCCCTaGAATGCTGTACCTTTGCCT +
Preference number: 4 (lower is better)
Translates to: LNLPGLGPFVGGHLVWLSRPCSP*NAVPLP
Trigger: AGGCAAAGGTACAGCATTCCAGGGGCTGCACGGCCT...GCTGAGCCAAACTAGGTGGCCACCTACAAAAGGGCCAAGGCCAGGCAAGTTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR CCA 90 bp GTGCACAGCACCATTACCCAGAGTGCAGGCTATGTCCAGGCTGGGCAGCAGCAACAACTTGCCTGGCCTTaGCCCTTTTGTAGGTGGCCA +
Preference number: 4 (lower is better)
Translates to: VHSTITQSAGYVQAGQQQQLAWP*PFCRWP
Trigger: TGGCCACCTACAAAAGGGCCAAGGCCAGGCAAGTTG...TTGCTGCTGCCCAGCCTGGACATAGCCTGCACTCTGGGTAATGGTGCTGTGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR CCA 90 bp GTGCACAGCACCATTACCCAGAGTGCAGGCTATGTCCAGGCTGGGCAGCAGCAACACCAAGGTGACACCTaGCTGCTGCTGAAATGGCCT +
Preference number: 4 (lower is better)
Translates to: VHSTITQSAGYVQAGQQQHQGDT*LLLKWP
Trigger: AGGCCATTTCAGCAGCAGCCAGGTGTCACCTTGGTG...TTGCTGCTGCCCAGCCTGGACATAGCCTGCACTCTGGGTAATGGTGCTGTGCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR TCA 90 bp CCTCTGTACAAAAGACCAGCCCATGCCCTGGGGCTGGGTCAATGGCCGGAGTCTGCTCATCCACCTTGCTaGTGTGAAACTCCATCTTCC +
Preference number: 4 (lower is better)
Translates to: PLYKRPAHALGLGQWPESAHPPC*CETPSS
Trigger: GGAAGATGGAGTTTCACATCAGCAAGGTGGATGAGC...AGACTCCGGCCATTGACCCAGCCCCAGGGCATGGGCTGGTCTTTTGTACAGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR TCA 90 bp GGCTCCTGGGCTGATGTGGTGGCTTCTTCCCTTTGTGCTGCTGAACATAGGGAAGGTCTGGCTGTCATCTaGCTCGATCCGACCCTTGAG +
Preference number: 4 (lower is better)
Translates to: GSWADVVASSLCAAEHREGLAVI*LDPTLE
Trigger: CTCAAGGGTCGGATCGAGTCAGATGACAGCCAGACC...TTCCCTATGTTCAGCAGCACAAAGGGAAGAAGCCACCACATCAGCCCAGGAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR TCA 90 bp CTCAACTTGCCTGGCCTTGGCCCTTTTGTAGGTGGCCACCTAGTTTGGCTCAGCGCTGGAAGGTTTTCTTaGGCTGGTTCAGCAGCGTCG +
Preference number: 4 (lower is better)
Translates to: LNLPGLGPFVGGHLVWLSAGRFS*AGSAAS
Trigger: CGACGCTGCTGAACCAGCTCAAGAAAACCTTCCAGC...GCTGAGCCAAACTAGGTGGCCACCTACAAAAGGGCCAAGGCCAGGCAAGTTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR TCA 90 bp GCCGCCGTCTGTGAGCTCCACCAGCACTCGCAGCAAGTCAGTCGGGCTGAGAGTGACTTCTCTTTGTTCTaGGCAGAGCTTGTCCATCTT +
Preference number: 4 (lower is better)
Translates to: AAVCELHQHSQQVSRAESDFSLF*AELVHL
Trigger: AAGATGGACAAGCTCTGCTCAGAACAAAGAGAAGTC...ACTCTCAGCCCGACTGACTTGCTGCGAGTGCTGGTGGAGCTCACAGACGGCGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR TCA 90 bp CTGCATCCCCAGTGCCTCTTGACGCAGAAGTGCCGAGCAGCTGACCGGCAGCGAGACTTCTCTTTGTTCTaGGCAGAGCTTGTCCATCTT +
Preference number: 4 (lower is better)
Translates to: LHPQCLLTQKCRAADRQRDFSLF*AELVHL
Trigger: AAGATGGACAAGCTCTGCTCAGAACAAAGAGAAGTC...TCGCTGCCGGTCAGCTGCTCGGCACTTCTGCGTCAAGAGGCACTGGGGATGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR TCA 90 bp GGCCTTGGCCCTTTTGTAGGTGGCCACCTAGTTTGGCTCAGCTCTGCATCTCGGGCAAGTCAGTCGGGCTaGGAGTGTGGTTGTAGAAAC +
Preference number: 4 (lower is better)
Translates to: GLGPFVGGHLVWLSSASRASQSG*ECGCRN
Trigger: GTTTCTACAACCACACTCTCAGCCCGACTGACTTGC...CCGAGATGCAGAGCTGAGCCAAACTAGGTGGCCACCTACAAAAGGGCCAAGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR TCA 90 bp TCTGCCTCTGTACAAAAGACCAGCCCATGCCCTGGGGCTGGGTCAATGGCCGGACGAAGCTGGGTTGATTaGTTGCATTTGGGTGCGGAT +
Preference number: 4 (lower is better)
Translates to: SASVQKTSPCPGAGSMAGRSWVD*LHLGAD
Trigger: ATCCGCACCCAAATGCAATCAATCAACCCAGCTTCG...TCCGGCCATTGACCCAGCCCCAGGGCATGGGCTGGTCTTTTGTACAGAGGCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR GCA 90 bp GCGAGGCCTGGAGTTCTACACACTTGCCTTGGAGCCTTTTATTTAGGGCCTCAAACTGCTGGCCAAAGCTaGCCTGCGTCTCCTCCCCAC +
Preference number: 4 (lower is better)
Translates to: ARPGVLHTCLGAFYLGPQTAGQS*PASPPH
Trigger: GTGGGGAGGAGACGCAGGGCAGCTTTGGCCAGCAGT...TTGAGGCCCTAAATAAAAGGCTCCAAGGCAAGTGTGTAGAACTCCAGGCCTCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000045083.6
CDS-3UTR GCA 90 bp GTGCACAGCACCATTACCCAGAGTGCAGGCTATGTCCAGGCTGGGCAGCAGCAAAAGATCTTCTTCACCTaGTGGGGCTTCGGGTCTGCA +
Preference number: 4 (lower is better)
Translates to: VHSTITQSAGYVQAGQQQKIFFT*WGFGSA
Trigger: TGCAGACCCGAAGCCCCAGCAGGTGAAGAAGATCTT...TTGCTGCTGCCCAGCCTGGACATAGCCTGCACTCTGGGTAATGGTGCTGTGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR GCA 90 bp CCTCTGTACAAAAGACCAGCCCATGCCCTGGGGCTGGGTCAATGGCCGGAGTCTTCCATCTTCCGAATGTaGCTTTCCACACAGCGCGTT +
Preference number: 4 (lower is better)
Translates to: PLYKRPAHALGLGQWPESSIFRM*LSTQRV
Trigger: AACGCGCTGTGTGGAAAGGCACATTCGGAAGATGGA...AGACTCCGGCCATTGACCCAGCCCCAGGGCATGGGCTGGTCTTTTGTACAGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR GCA 90 bp TTAGGGCCTCAACTTGCCTGGCCTTGGCCCTTTTGTAGGTGGCCACCTAGTTTGGCAGGCGGCACTGGATaGAGTAGTCCTCGTACAGCT +
Preference number: 4 (lower is better)
Translates to: LGPQLAWPWPFCRWPPSLAGGTG*SSPRTA
Trigger: AGCTGTACGAGGACTACTGCATCCAGTGCCGCCTGC...CAAACTAGGTGGCCACCTACAAAAGGGCCAAGGCCAGGCAAGTTGAGGCCCTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR GCA 90 bp GCGAGGCCTGGAGTTCTACACACTTGCCTTGGAGCCTTTTATTTAGGGCCTCAAGGCTACTCGAGGCTGTaGCGCTGTGGAACAGGGAGC +
Preference number: 4 (lower is better)
Translates to: ARPGVLHTCLGAFYLGPQGYSRL*RCGTGS
Trigger: GCTCCCTGTTCCACAGCGGCACAGCCTCGAGTAGCC...TTGAGGCCCTAAATAAAAGGCTCCAAGGCAAGTGTGTAGAACTCCAGGCCTCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR GCA 90 bp GCGAGGCCTGGAGTTCTACACACTTGCCTTGGAGCCTTTTATTTAGGGCCTCAAGCTAGGCATGCGGCCTaGTGGAGCCTTGCGTCGTTC +
Preference number: 4 (lower is better)
Translates to: ARPGVLHTCLGAFYLGPQARHAA*WSLASF
Trigger: GAACGACGCAAGGCTCCAGCAGGCCGCATGCCTAGC...TTGAGGCCCTAAATAAAAGGCTCCAAGGCAAGTGTGTAGAACTCCAGGCCTCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR GCA 90 bp TTAGGGCCTCAACTTGCCTGGCCTTGGCCCTTTTGTAGGTGGCCACCTAGTTTGGCTCTGTTGAGGCCGTaGAGCCCCTGGAATGCTGTA +
Preference number: 4 (lower is better)
Translates to: LGPQLAWPWPFCRWPPSLALLRP*SPWNAV
Trigger: TACAGCATTCCAGGGGCTGCACGGCCTCAACAGAGC...CAAACTAGGTGGCCACCTACAAAAGGGCCAAGGCCAGGCAAGTTGAGGCCCTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR GCA 90 bp GGCCTTGGCCCTTTTGTAGGTGGCCACCTAGTTTGGCTCAGCTCTGCATCTCGGAGTTTGGCTCAGCTCTaGATCTCGGGGAAGGTCACA +
Preference number: 4 (lower is better)
Translates to: GLGPFVGGHLVWLSSASRSLAQL*ISGKVT
Trigger: TGTGACCTTCCCCGAGATGCAGAGCTGAGCCAAACT...CCGAGATGCAGAGCTGAGCCAAACTAGGTGGCCACCTACAAAAGGGCCAAGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR GCA 90 bp TTAGGGCCTCAACTTGCCTGGCCTTGGCCCTTTTGTAGGTGGCCACCTAGTTTGCTGCTGCATCCCCAGTaGCTCTTGACGCAGAAGTGC +
Preference number: 4 (lower is better)
Translates to: LGPQLAWPWPFCRWPPSLLLHPQ*LLTQKC
Trigger: GCACTTCTGCGTCAAGAGGCACTGGGGATGCAGCAG...CAAACTAGGTGGCCACCTACAAAAGGGCCAAGGCCAGGCAAGTTGAGGCCCTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR GCA 90 bp CAGTGCCTCTTGACGCAGAAGTGCCGAGCAGCTGACCGGCAGCGAGGCCTGGAGACCCTAGGTTCTCTCTaGACTATTAACACAGACATC +
Preference number: 4 (lower is better)
Translates to: QCLLTQKCRAADRQRGLETLGSL*TINTDI
Trigger: GATGTCTGTGTTAATAGTGCAGAGAGAACCTAGGGT...CTCCAGGCCTCGCTGCCGGTCAGCTGCTCGGCACTTCTGCGTCAAGAGGCACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR GCA 90 bp TTAGGGCCTCAACTTGCCTGGCCTTGGCCCTTTTGTAGGTGGCCACCTAGTTTGCTGGACGCGGCCGATTaGTTGTCAGTGTCACTCCCA +
Preference number: 4 (lower is better)
Translates to: LGPQLAWPWPFCRWPPSLLDAAD*LSVSLP
Trigger: TGGGAGTGACACTGACAAGCAATCGGCCGCGTCCAG...CAAACTAGGTGGCCACCTACAAAAGGGCCAAGGCCAGGCAAGTTGAGGCCCTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327979.8
CDS-3UTR GCA 90 bp GCGAGGCCTGGAGTTCTACACACTTGCCTTGGAGCCTTTTATTTAGGGCCTCAAGAGTCTTCCTTCTGGTaGAGGGAGGCCGGTGCCCTG +
Preference number: 4 (lower is better)
Translates to: ARPGVLHTCLGAFYLGPQESSFW*REAGAL
Trigger: CAGGGCACCGGCCTCCCTGCACCAGAAGGAAGACTC...TTGAGGCCCTAAATAAAAGGCTCCAAGGCAAGTGTGTAGAACTCCAGGCCTCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327979.8
CDS-3UTR CCA 90 bp CTCAACTTGCCTGGCCTTGGCCCTTTTGTAGGTGGCCACCTAGTTTGGCTCAGCACCTCACCGACATGGTaGTCACCTTTGGTGGCAGAC +
Preference number: 4 (lower is better)
Translates to: LNLPGLGPFVGGHLVWLSTSPTW*SPLVAD
Trigger: GTCTGCCACCAAAGGTGACCACCATGTCGGTGAGGT...GCTGAGCCAAACTAGGTGGCCACCTACAAAAGGGCCAAGGCCAGGCAAGTTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000045083.6
CDS-3UTR CCA 90 bp CCTCTGTACAAAAGACCAGCCCATGCCCTGGGGCTGGGTCAATGGCCGGAGTCTGCGTGCCGTACATCTTaGAGGATTTTGCAGGCATTC +
Preference number: 4 (lower is better)
Translates to: PLYKRPAHALGLGQWPESACRTS*RILQAF
Trigger: GAATGCCTGCAAAATCCTCCAAGATGTACGGCACGC...AGACTCCGGCCATTGACCCAGCCCCAGGGCATGGGCTGGTCTTTTGTACAGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR CCA 90 bp GCGAGGCCTGGAGTTCTACACACTTGCCTTGGAGCCTTTTATTTAGGGCCTCAAAGCCCTGTGGCAGGCTaGGGCTCTCCCCTCCTAAGT +
Preference number: 4 (lower is better)
Translates to: ARPGVLHTCLGAFYLGPQSPVAG*GSPLLS
Trigger: ACTTAGGAGGGGAGAGCCCCAGCCTGCCACAGGGCT...TTGAGGCCCTAAATAAAAGGCTCCAAGGCAAGTGTGTAGAACTCCAGGCCTCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR CCA 90 bp TGGGCAGCTCACACTCCTGGAGGAGTGCACAGCACCATTACCCAGAGTGCAGGCAGAGCTTTGCAGACTTaGAGGTGTACCATCAGCAGC +
Preference number: 4 (lower is better)
Translates to: WAAHTPGGVHSTITQSAGRALQT*RCTISS
Trigger: GCTGCTGATGGTACACCTCCAAGTCTGCAAAGCTCT...GCCTGCACTCTGGGTAATGGTGCTGTGCACTCCTCCAGGAGTGTGAGCTGCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR CCA 90 bp CTCAACTTGCCTGGCCTTGGCCCTTTTGTAGGTGGCCACCTAGTTTGGCTCAGCCGTCCGCGAGGCCTGTaGGATGATCTCTTCAATGGA +
Preference number: 4 (lower is better)
Translates to: LNLPGLGPFVGGHLVWLSRPRGL*DDLFNG
Trigger: TCCATTGAAGAGATCATCCCACAGGCCTCGCGGACG...GCTGAGCCAAACTAGGTGGCCACCTACAAAAGGGCCAAGGCCAGGCAAGTTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR CCA 90 bp AAAAGACCAGCCCATGCCCTGGGGCTGGGTCAATGGCCGGAGTCTCAGGTAGAGAAGGTTTTCTTGAGCTaGTTCAGCAGCGTCGTGGCA +
Preference number: 4 (lower is better)
Translates to: KRPAHALGLGQWPESQVEKVFLS*FSSVVA
Trigger: TGCCACGACGCTGCTGAACCAGCTCAAGAAAACCTT...CTCTACCTGAGACTCCGGCCATTGACCCAGCCCCAGGGCATGGGCTGGTCTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR CCA 90 bp GGCCTTGGCCCTTTTGTAGGTGGCCACCTAGTTTGGCTCAGCTCTGCATCTCGGACTTCCTTGGTGAGCTaGGTGAAGTGCTTCTCCAGG +
Preference number: 4 (lower is better)
Translates to: GLGPFVGGHLVWLSSASRTSLVS*VKCFSR
Trigger: CCTGGAGAAGCACTTCACCCAGCTCACCAAGGAAGT...CCGAGATGCAGAGCTGAGCCAAACTAGGTGGCCACCTACAAAAGGGCCAAGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR CCA 90 bp GGCTCCTGGGCTGATGTGGTGGCTTCTTCCCTTTGTGCTGCTGAACATAGGGAAACCGGCAGCGAGGCCTaGAGTTCTACACACTTGCCT +
Preference number: 4 (lower is better)
Translates to: GSWADVVASSLCAAEHRETGSEA*SSTHLP
Trigger: AGGCAAGTGTGTAGAACTCCAGGCCTCGCTGCCGGT...TTCCCTATGTTCAGCAGCACAAAGGGAAGAAGCCACCACATCAGCCCAGGAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR CCA 90 bp CTGCATCCCCAGTGCCTCTTGACGCAGAAGTGCCGAGCAGCTGACCGGCAGCGATTGATTGATTGCATTTaGGTGCGGATGGCCAAAGTG +
Preference number: 4 (lower is better)
Translates to: LHPQCLLTQKCRAADRQRLIDCI*VRMAKV
Trigger: CACTTTGGCCATCCGCACCCAAATGCAATCAATCAA...TCGCTGCCGGTCAGCTGCTCGGCACTTCTGCGTCAAGAGGCACTGGGGATGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR CCA 90 bp GGCTCCTGGGCTGATGTGGTGGCTTCTTCCCTTTGTGCTGCTGAACATAGGGAAACCATCGAGCAGGTCTaGACACTCGAGTGCAGTCCC +
Preference number: 4 (lower is better)
Translates to: GSWADVVASSLCAAEHRETIEQV*TLECSP
Trigger: GGGACTGCACTCGAGTGTCCAGACCTGCTCGATGGT...TTCCCTATGTTCAGCAGCACAAAGGGAAGAAGCCACCACATCAGCCCAGGAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327979.8
CDS-3UTR TCA 90 bp TCTGCCTCTGTACAAAAGACCAGCCCATGCCCTGGGGCTGGGTCAATGGCCGGATCCACCTTGCTGATGTaGAACTCCATCTTCCGAATG +
Preference number: 4 (lower is better)
Translates to: SASVQKTSPCPGAGSMAGSTLLM*NSIFRM
Trigger: CATTCGGAAGATGGAGTTTCACATCAGCAAGGTGGA...TCCGGCCATTGACCCAGCCCCAGGGCATGGGCTGGTCTTTTGTACAGAGGCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR TCA 90 bp GCCGCCGTCTGTGAGCTCCACCAGCACTCGCAGCAAGTCAGTCGGGCTGAGAGTAATTGCGTTCTTCAGTaGACTCTTTCTTTAGGCCAG +
Preference number: 4 (lower is better)
Translates to: AAVCELHQHSQQVSRAESNCVLQ*TLSLGQ
Trigger: CTGGCCTAAAGAAAGAGTTCACTGAAGAACGCAATT...ACTCTCAGCCCGACTGACTTGCTGCGAGTGCTGGTGGAGCTCACAGACGGCGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR GCA 90 bp TGGGCAGCTCACACTCCTGGAGGAGTGCACAGCACCATTACCCAGAGTGCAGGCCATCTTGGAGGATTTTaGAGGCATTCGCGATCTCAC +
Preference number: 4 (lower is better)
Translates to: WAAHTPGGVHSTITQSAGHLGGF*RHSRSH
Trigger: GTGAGATCGCGAATGCCTGCAAAATCCTCCAAGATG...GCCTGCACTCTGGGTAATGGTGCTGTGCACTCCTCCAGGAGTGTGAGCTGCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR GCA 90 bp GCCGCCGTCTGTGAGCTCCACCAGCACTCGCAGCAAGTCAGTCGGGCTGAGAGTGAGGCCTCTTTTCAATaGTTCGAAGATCTTCTTCAC +
Preference number: 4 (lower is better)
Translates to: AAVCELHQHSQQVSRAESEASFQ*FEDLLH
Trigger: GTGAAGAAGATCTTCGAAGCATTGAAAAGAGGCCTC...ACTCTCAGCCCGACTGACTTGCTGCGAGTGCTGGTGGAGCTCACAGACGGCGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR GCA 90 bp GCGAGGCCTGGAGTTCTACACACTTGCCTTGGAGCCTTTTATTTAGGGCCTCAAGATGTCACACGTCACTaGACCCACAGCCAGCGAGCC +
Preference number: 4 (lower is better)
Translates to: ARPGVLHTCLGAFYLGPQDVTRH*THSQRA
Trigger: GGCTCGCTGGCTGTGGGTGCAGTGACGTGTGACATC...TTGAGGCCCTAAATAAAAGGCTCCAAGGCAAGTGTGTAGAACTCCAGGCCTCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR GCA 90 bp GGCTCCTGGGCTGATGTGGTGGCTTCTTCCCTTTGTGCTGCTGAACATAGGGAATCAAACGGGTTCCACTaGACCTCCAGCTGCAGCTTG +
Preference number: 4 (lower is better)
Translates to: GSWADVVASSLCAAEHRESNGFH*TSSCSL
Trigger: CAAGCTGCAGCTGGAGGTGCAGTGGAACCCGTTTGA...TTCCCTATGTTCAGCAGCACAAAGGGAAGAAGCCACCACATCAGCCCAGGAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR GCA 90 bp AAAAGACCAGCCCATGCCCTGGGGCTGGGTCAATGGCCGGAGTCTCAGGTAGAGGTTCTCCAATGCCATTaGTACAGCAACCTCAAACCC +
Preference number: 4 (lower is better)
Translates to: KRPAHALGLGQWPESQVEVLQCH*YSNLKP
Trigger: GGGTTTGAGGTTGCTGTAGCAATGGCATTGGAGAAC...CTCTACCTGAGACTCCGGCCATTGACCCAGCCCCAGGGCATGGGCTGGTCTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR CCA 90 bp GGCTCCTGGGCTGATGTGGTGGCTTCTTCCCTTTGTGCTGCTGAACATAGGGAATGCCTCTCTCTGGCCTaGCACTTAGAACTGATGCCG +
Preference number: 4 (lower is better)
Translates to: GSWADVVASSLCAAEHRECLSLA*HLELMP
Trigger: CGGCATCAGTTCTAAGTGCCAGGCCAGAGAGAGGCA...TTCCCTATGTTCAGCAGCACAAAGGGAAGAAGCCACCACATCAGCCCAGGAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000045083.6
CDS-3UTR CCA 90 bp GTGCACAGCACCATTACCCAGAGTGCAGGCTATGTCCAGGCTGGGCAGCAGCAAGCGTGCCGTACATCTTaGAGGATTTTGCAGGCATTC +
Preference number: 4 (lower is better)
Translates to: VHSTITQSAGYVQAGQQQACRTS*RILQAF
Trigger: GAATGCCTGCAAAATCCTCCAAGATGTACGGCACGC...TTGCTGCTGCCCAGCCTGGACATAGCCTGCACTCTGGGTAATGGTGCTGTGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR CCA 90 bp GCGAGGCCTGGAGTTCTACACACTTGCCTTGGAGCCTTTTATTTAGGGCCTCAAAGCCCACATCTGAGGTaGACGCCGACGTGCTGGTCT +
Preference number: 4 (lower is better)
Translates to: ARPGVLHTCLGAFYLGPQSPHLR*TPTCWS
Trigger: AGACCAGCACGTCGGCGTCCACCTCAGATGTGGGCT...TTGAGGCCCTAAATAAAAGGCTCCAAGGCAAGTGTGTAGAACTCCAGGCCTCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR CCA 90 bp GGCCTTGGCCCTTTTGTAGGTGGCCACCTAGTTTGGCTCAGCTCTGCATCTCGGAGAGCTTTGCAGACTTaGAGGTGTACCATCAGCAGC +
Preference number: 4 (lower is better)
Translates to: GLGPFVGGHLVWLSSASRRALQT*RCTISS
Trigger: GCTGCTGATGGTACACCTCCAAGTCTGCAAAGCTCT...CCGAGATGCAGAGCTGAGCCAAACTAGGTGGCCACCTACAAAAGGGCCAAGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR CCA 90 bp GTGCACAGCACCATTACCCAGAGTGCAGGCTATGTCCAGGCTGGGCAGCAGCAACCTCTGACTCTGTGCTaGAAGGTTTTCTTGAGCTGG +
Preference number: 4 (lower is better)
Translates to: VHSTITQSAGYVQAGQQQPLTLC*KVFLSW
Trigger: CCAGCTCAAGAAAACCTTCCAGCACAGAGTCAGAGG...TTGCTGCTGCCCAGCCTGGACATAGCCTGCACTCTGGGTAATGGTGCTGTGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR CCA 90 bp GGCCTTGGCCCTTTTGTAGGTGGCCACCTAGTTTGGCTCAGCTCTGCATCTCGGCCTCTGACTCTGTGCTaGAAGGTTTTCTTGAGCTGG +
Preference number: 4 (lower is better)
Translates to: GLGPFVGGHLVWLSSASRPLTLC*KVFLSW
Trigger: CCAGCTCAAGAAAACCTTCCAGCACAGAGTCAGAGG...CCGAGATGCAGAGCTGAGCCAAACTAGGTGGCCACCTACAAAAGGGCCAAGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR CCA 90 bp GCGAGGCCTGGAGTTCTACACACTTGCCTTGGAGCCTTTTATTTAGGGCCTCAAGCTTCCGGACCACCTTaGCCTGTCCCGCACAGTGAA +
Preference number: 4 (lower is better)
Translates to: ARPGVLHTCLGAFYLGPQASGPP*PVPHSE
Trigger: TTCACTGTGCGGGACAGGCCAAGGTGGTCCGGAAGC...TTGAGGCCCTAAATAAAAGGCTCCAAGGCAAGTGTGTAGAACTCCAGGCCTCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR CCA 90 bp CCGGCAGCGAGGCCTGGAGTTCTACACACTTGCCTTGGAGCCTTTTATTTAGGGCACAGGCTGGCAGTCTaGTCGATGCTTTCAATGCCC +
Preference number: 4 (lower is better)
Translates to: PAARPGVLHTCLGAFYLGHRLAV*SMLSMP
Trigger: GGGCATTGAAAGCATCGACCAGACTGCCAGCCTGTG...CCCTAAATAAAAGGCTCCAAGGCAAGTGTGTAGAACTCCAGGCCTCGCTGCCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR CCA 90 bp TTAGGGCCTCAACTTGCCTGGCCTTGGCCCTTTTGTAGGTGGCCACCTAGTTTGCAGACTGGCACAGGCTaGCAGTCTGGTCGATGCTTT +
Preference number: 4 (lower is better)
Translates to: LGPQLAWPWPFCRWPPSLQTGTG*QSGRCF
Trigger: AAAGCATCGACCAGACTGCCAGCCTGTGCCAGTCTG...CAAACTAGGTGGCCACCTACAAAAGGGCCAAGGCCAGGCAAGTTGAGGCCCTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR CCA 90 bp GCCGCCGTCTGTGAGCTCCACCAGCACTCGCAGCAAGTCAGTCGGGCTGAGAGTTCAACATCTGCCTCCTaGCAAAAGACTTCTCTTTGT +
Preference number: 4 (lower is better)
Translates to: AAVCELHQHSQQVSRAESSTSAS*QKTSLC
Trigger: ACAAAGAGAAGTCTTTTGCCAGGAGGCAGATGTTGA...ACTCTCAGCCCGACTGACTTGCTGCGAGTGCTGGTGGAGCTCACAGACGGCGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR CCA 90 bp GCGAGGCCTGGAGTTCTACACACTTGCCTTGGAGCCTTTTATTTAGGGCCTCAAGCTGCTCAGGGCTCCTaGGCTGATGTGGTGGCTTCT +
Preference number: 4 (lower is better)
Translates to: ARPGVLHTCLGAFYLGPQAAQGS*ADVVAS
Trigger: AGAAGCCACCACATCAGCCCAGGAGCCCTGAGCAGC...TTGAGGCCCTAAATAAAAGGCTCCAAGGCAAGTGTGTAGAACTCCAGGCCTCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR CCA 90 bp TTAGGGCCTCAACTTGCCTGGCCTTGGCCCTTTTGTAGGTGGCCACCTAGTTTGACCTCACCGACATGGTaGTCACCATCGAGCAGGTCT +
Preference number: 4 (lower is better)
Translates to: LGPQLAWPWPFCRWPPSLTSPTW*SPSSRS
Trigger: AGACCTGCTCGATGGTGACCACCATGTCGGTGAGGT...CAAACTAGGTGGCCACCTACAAAAGGGCCAAGGCCAGGCAAGTTGAGGCCCTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327979.8
3UTR CAA 72 bp CAGCTGACCGGCAGCGAGGCCTGGAGTTCTACACACTaGCCTTGGAGCCTTTTATTTAGGGCCTCAACTTGC +
Preference number: 4 (lower is better)
Translates to: QLTGSEAWSSTH*PWSLLFRASTC
Trigger: GCAAGTTGAGGCCCTAAATAAAAGGCTCCAAGGCAAGTGTGTAGAACTCCAGGCCTCGCTGCCGGTCAGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR TCA 90 bp AAAAGACCAGCCCATGCCCTGGGGCTGGGTCAATGGCCGGAGTCTCAGGTAGAGCACACAGATACTCCTTaGGGCCTCTTTTCAATGCTT +
Preference number: 4 (lower is better)
Translates to: KRPAHALGLGQWPESQVEHTDTP*GLFSML
Trigger: AAGCATTGAAAAGAGGCCTCAAGGAGTATCTGTGTG...CTCTACCTGAGACTCCGGCCATTGACCCAGCCCCAGGGCATGGGCTGGTCTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR TCA 90 bp TTAGGGCCTCAACTTGCCTGGCCTTGGCCCTTTTGTAGGTGGCCACCTAGTTTGGCAACTCCGTCACCTTaGTGTCCAGGTTCTCATGCA +
Preference number: 4 (lower is better)
Translates to: LGPQLAWPWPFCRWPPSLATPSP*CPGSHA
Trigger: TGCATGAGAACCTGGACATCAAGGTGACGGAGTTGC...CAAACTAGGTGGCCACCTACAAAAGGGCCAAGGCCAGGCAAGTTGAGGCCCTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR TCA 90 bp CCGGCAGCGAGGCCTGGAGTTCTACACACTTGCCTTGGAGCCTTTTATTTAGGGGCGAGGCCTGTGGGATaGTCTCTTCAATGGATGTTG +
Preference number: 4 (lower is better)
Translates to: PAARPGVLHTCLGAFYLGARPVG*SLQWML
Trigger: CAACATCCATTGAAGAGATCATCCCACAGGCCTCGC...CCCTAAATAAAAGGCTCCAAGGCAAGTGTGTAGAACTCCAGGCCTCGCTGCCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR TCA 90 bp CCGGCAGCGAGGCCTGGAGTTCTACACACTTGCCTTGGAGCCTTTTATTTAGGGGCAAGTCAGTCGGGCTaGGAGTGTGGTTGTAGAAAC +
Preference number: 4 (lower is better)
Translates to: PAARPGVLHTCLGAFYLGASQSG*ECGCRN
Trigger: GTTTCTACAACCACACTCTCAGCCCGACTGACTTGC...CCCTAAATAAAAGGCTCCAAGGCAAGTGTGTAGAACTCCAGGCCTCGCTGCCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR TCA 90 bp CTCAACTTGCCTGGCCTTGGCCCTTTTGTAGGTGGCCACCTAGTTTGGCTCAGCCGAAGCTGGGTTGATTaGTTGCATTTGGGTGCGGAT +
Preference number: 4 (lower is better)
Translates to: LNLPGLGPFVGGHLVWLSRSWVD*LHLGAD
Trigger: ATCCGCACCCAAATGCAATCAATCAACCCAGCTTCG...GCTGAGCCAAACTAGGTGGCCACCTACAAAAGGGCCAAGGCCAGGCAAGTTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR TCA 90 bp CTCAACTTGCCTGGCCTTGGCCCTTTTGTAGGTGGCCACCTAGTTTGGCTCAGCCTTCCGAAGCTGGGTTaGTTGATTGCATTTGGGTGC +
Preference number: 4 (lower is better)
Translates to: LNLPGLGPFVGGHLVWLSLPKLG*LIAFGC
Trigger: GCACCCAAATGCAATCAATCAACCCAGCTTCGGAAG...GCTGAGCCAAACTAGGTGGCCACCTACAAAAGGGCCAAGGCCAGGCAAGTTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR GCA 90 bp TCTGCCTCTGTACAAAAGACCAGCCCATGCCCTGGGGCTGGGTCAATGGCCGGACAGCCAGAGGGAACCTaGAATTTCACCTCATTTAGA +
Preference number: 4 (lower is better)
Translates to: SASVQKTSPCPGAGSMAGQPEGT*NFTSFR
Trigger: TCTAAATGAGGTGAAATTGCAGGTTCCCTCTGGCTG...TCCGGCCATTGACCCAGCCCCAGGGCATGGGCTGGTCTTTTGTACAGAGGCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000045083.6
CDS-3UTR GCA 90 bp GCGAGGCCTGGAGTTCTACACACTTGCCTTGGAGCCTTTTATTTAGGGCCTCAAGATCCTCCGGCTCTGTaGACTGCTGAAGCCTGCGAA +
Preference number: 4 (lower is better)
Translates to: ARPGVLHTCLGAFYLGPQDPPAL*TAEACE
Trigger: TTCGCAGGCTTCAGCAGTGCACAGAGCCGGAGGATC...TTGAGGCCCTAAATAAAAGGCTCCAAGGCAAGTGTGTAGAACTCCAGGCCTCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR GCA 90 bp CCGGCAGCGAGGCCTGGAGTTCTACACACTTGCCTTGGAGCCTTTTATTTAGGGTCCAGCTCAGCCTGCTaGACACACAGATACTCCTTG +
Preference number: 4 (lower is better)
Translates to: PAARPGVLHTCLGAFYLGSSSAC*THRYSL
Trigger: CAAGGAGTATCTGTGTGTGCAGCAGGCTGAGCTGGA...CCCTAAATAAAAGGCTCCAAGGCAAGTGTGTAGAACTCCAGGCCTCGCTGCCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR GCA 90 bp CTCAACTTGCCTGGCCTTGGCCCTTTTGTAGGTGGCCACCTAGTTTGGCTCAGCTCTGCAGCAGAGCTTTaGAGACTTGGAGGTGTACCA +
Preference number: 4 (lower is better)
Translates to: LNLPGLGPFVGGHLVWLSSAAEL*RLGGVP
Trigger: TGGTACACCTCCAAGTCTGCAAAGCTCTGCTGCAGA...GCTGAGCCAAACTAGGTGGCCACCTACAAAAGGGCCAAGGCCAGGCAAGTTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR GCA 90 bp CTCAACTTGCCTGGCCTTGGCCCTTTTGTAGGTGGCCACCTAGTTTGGCTCAGCTCCAGAACGTGCTTTTaGTGTGCCACTTCTTCCAGG +
Preference number: 4 (lower is better)
Translates to: LNLPGLGPFVGGHLVWLSSRTCF*CATSSR
Trigger: CCTGGAAGAAGTGGCACAGCAAAAGCACGTTCTGGA...GCTGAGCCAAACTAGGTGGCCACCTACAAAAGGGCCAAGGCCAGGCAAGTTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR GCA 90 bp GTGCACAGCACCATTACCCAGAGTGCAGGCTATGTCCAGGCTGGGCAGCAGCAAAGTGTCTCCAGAACGTaGTTTTGCTGTGCCACTTCT +
Preference number: 4 (lower is better)
Translates to: VHSTITQSAGYVQAGQQQSVSRT*FCCATS
Trigger: AGAAGTGGCACAGCAAAAGCACGTTCTGGAGACACT...TTGCTGCTGCCCAGCCTGGACATAGCCTGCACTCTGGGTAATGGTGCTGTGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR GCA 90 bp CCTCTGTACAAAAGACCAGCCCATGCCCTGGGGCTGGGTCAATGGCCGGAGTCTCAATGGATGTTGCCTTaGCGACCTTCTCAAAGTCAA +
Preference number: 4 (lower is better)
Translates to: PLYKRPAHALGLGQWPESQWMLP*RPSQSQ
Trigger: TTGACTTTGAGAAGGTCGGCAAGGCAACATCCATTG...AGACTCCGGCCATTGACCCAGCCCCAGGGCATGGGCTGGTCTTTTGTACAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR GCA 90 bp GCGAGGCCTGGAGTTCTACACACTTGCCTTGGAGCCTTTTATTTAGGGCCTCAAGCTCTGTTGAGGCCGTaGAGCCCCTGGAATGCTGTA +
Preference number: 4 (lower is better)
Translates to: ARPGVLHTCLGAFYLGPQALLRP*SPWNAV
Trigger: TACAGCATTCCAGGGGCTGCACGGCCTCAACAGAGC...TTGAGGCCCTAAATAAAAGGCTCCAAGGCAAGTGTGTAGAACTCCAGGCCTCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR GCA 90 bp GCGAGGCCTGGAGTTCTACACACTTGCCTTGGAGCCTTTTATTTAGGGCCTCAATGGCCTGAGCAGTCTTaGATTAGCAGGGCCAGCCAC +
Preference number: 4 (lower is better)
Translates to: ARPGVLHTCLGAFYLGPQWPEQS*ISRASH
Trigger: GTGGCTGGCCCTGCTAATGCAAGACTGCTCAGGCCA...TTGAGGCCCTAAATAAAAGGCTCCAAGGCAAGTGTGTAGAACTCCAGGCCTCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR CCA 90 bp CCGGCAGCGAGGCCTGGAGTTCTACACACTTGCCTTGGAGCCTTTTATTTAGGGACTTCCTTGGTGAGCTaGGTGAAGTGCTTCTCCAGG +
Preference number: 4 (lower is better)
Translates to: PAARPGVLHTCLGAFYLGTSLVS*VKCFSR
Trigger: CCTGGAGAAGCACTTCACCCAGCTCACCAAGGAAGT...CCCTAAATAAAAGGCTCCAAGGCAAGTGTGTAGAACTCCAGGCCTCGCTGCCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR CCA 90 bp CCGGCAGCGAGGCCTGGAGTTCTACACACTTGCCTTGGAGCCTTTTATTTAGGGTGGCCCTTTTGTAGGTaGCCACCTAGTTTGGCTCAG +
Preference number: 4 (lower is better)
Translates to: PAARPGVLHTCLGAFYLGWPFCR*PPSLAQ
Trigger: CTGAGCCAAACTAGGTGGCCACCTACAAAAGGGCCA...CCCTAAATAAAAGGCTCCAAGGCAAGTGTGTAGAACTCCAGGCCTCGCTGCCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR TCA 90 bp CCGGCAGCGAGGCCTGGAGTTCTACACACTTGCCTTGGAGCCTTTTATTTAGGGGCTCATCCACCTTGCTaGTGTGAAACTCCATCTTCC +
Preference number: 4 (lower is better)
Translates to: PAARPGVLHTCLGAFYLGAHPPC*CETPSS
Trigger: GGAAGATGGAGTTTCACATCAGCAAGGTGGATGAGC...CCCTAAATAAAAGGCTCCAAGGCAAGTGTGTAGAACTCCAGGCCTCGCTGCCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR TCA 90 bp CCGGCAGCGAGGCCTGGAGTTCTACACACTTGCCTTGGAGCCTTTTATTTAGGGCTTCCGAAGCTGGGTTaGTTGATTGCATTTGGGTGC +
Preference number: 4 (lower is better)
Translates to: PAARPGVLHTCLGAFYLGLPKLG*LIAFGC
Trigger: GCACCCAAATGCAATCAATCAACCCAGCTTCGGAAG...CCCTAAATAAAAGGCTCCAAGGCAAGTGTGTAGAACTCCAGGCCTCGCTGCCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR TCA 90 bp AAAAGACCAGCCCATGCCCTGGGGCTGGGTCAATGGCCGGAGTCTCAGGTAGAGTTCTTAGCAGTTTATTaGCGAGATCCTAGGGTAGCT +
Preference number: 4 (lower is better)
Translates to: KRPAHALGLGQWPESQVEFLAVY*RDPRVA
Trigger: AGCTACCCTAGGATCTCGTCAATAAACTGCTAAGAA...CTCTACCTGAGACTCCGGCCATTGACCCAGCCCCAGGGCATGGGCTGGTCTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR GCA 90 bp AAAAGACCAGCCCATGCCCTGGGGCTGGGTCAATGGCCGGAGTCTCAGGTAGAGGAGGCCTCTTTTCAATaGTTCGAAGATCTTCTTCAC +
Preference number: 4 (lower is better)
Translates to: KRPAHALGLGQWPESQVEEASFQ*FEDLLH
Trigger: GTGAAGAAGATCTTCGAAGCATTGAAAAGAGGCCTC...CTCTACCTGAGACTCCGGCCATTGACCCAGCCCCAGGGCATGGGCTGGTCTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR GCA 90 bp GGCTCCTGGGCTGATGTGGTGGCTTCTTCCCTTTGTGCTGCTGAACATAGGGAATCTGCAGCAGAGCTTTaGAGACTTGGAGGTGTACCA +
Preference number: 4 (lower is better)
Translates to: GSWADVVASSLCAAEHRESAAEL*RLGGVP
Trigger: TGGTACACCTCCAAGTCTGCAAAGCTCTGCTGCAGA...TTCCCTATGTTCAGCAGCACAAAGGGAAGAAGCCACCACATCAGCCCAGGAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR GCA 90 bp CCGGCAGCGAGGCCTGGAGTTCTACACACTTGCCTTGGAGCCTTTTATTTAGGGTCCAGAACGTGCTTTTaGTGTGCCACTTCTTCCAGG +
Preference number: 4 (lower is better)
Translates to: PAARPGVLHTCLGAFYLGSRTCF*CATSSR
Trigger: CCTGGAAGAAGTGGCACAGCAAAAGCACGTTCTGGA...CCCTAAATAAAAGGCTCCAAGGCAAGTGTGTAGAACTCCAGGCCTCGCTGCCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR GCA 90 bp GTGCACAGCACCATTACCCAGAGTGCAGGCTATGTCCAGGCTGGGCAGCAGCAACTCTTCAATGGATGTTaGCTTGCCGACCTTCTCAAA +
Preference number: 4 (lower is better)
Translates to: VHSTITQSAGYVQAGQQQLFNGC*LADLLK
Trigger: TTTGAGAAGGTCGGCAAGGCAACATCCATTGAAGAG...TTGCTGCTGCCCAGCCTGGACATAGCCTGCACTCTGGGTAATGGTGCTGTGCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR GCA 90 bp TCGATGAGAATGTTCAAGTTAAAGTTCTCCAATGCCATTGCTACAGCAACCTCAGAGCGCTGGCCGCCCTaGACACCCTCGGAGTGCCGT +
Preference number: 4 (lower is better)
Translates to: SMRMFKLKFSNAIATATSERWPP*TPSECR
Trigger: ACGGCACTCCGAGGGTGTGCAGGGCGGCCAGCGCTC...TGAGGTTGCTGTAGCAATGGCATTGGAGAACTTTAACTTGAACATTCTCATCGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR GCA 90 bp TCTGCCTCTGTACAAAAGACCAGCCCATGCCCTGGGGCTGGGTCAATGGCCGGATGTGATTTCAACATCTaGCTCCTGGCAAAAGACTTC +
Preference number: 4 (lower is better)
Translates to: SASVQKTSPCPGAGSMAGCDFNI*LLAKDF
Trigger: GAAGTCTTTTGCCAGGAGGCAGATGTTGAAATCACA...TCCGGCCATTGACCCAGCCCCAGGGCATGGGCTGGTCTTTTGTACAGAGGCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR CCA 90 bp AAGCAATTGCGTTCTTCAGTGAACTCTTTCTTTAGGCCAGTTGATGGCTTCTTACTCTGGCAGGAGACCTaGGGGCAGGGGGTCCTCCCG +
Preference number: 4 (lower is better)
Translates to: KQLRSSVNSFFRPVDGFLLWQET*GQGVLP
Trigger: CGGGAGGACCCCCTGCCCCCAGGTCTCCTGCCAGAG...TAAGAAGCCATCAACTGGCCTAAAGAAAGAGTTCACTGAAGAACGCAATTGCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR CCA 90 bp TCTGCCTCTGTACAAAAGACCAGCCCATGCCCTGGGGCTGGGTCAATGGCCGGATCAACATCTGCCTCCTaGCAAAAGACTTCTCTTTGT +
Preference number: 4 (lower is better)
Translates to: SASVQKTSPCPGAGSMAGSTSAS*QKTSLC
Trigger: ACAAAGAGAAGTCTTTTGCCAGGAGGCAGATGTTGA...TCCGGCCATTGACCCAGCCCCAGGGCATGGGCTGGTCTTTTGTACAGAGGCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR CCA 90 bp GCGAGGCCTGGAGTTCTACACACTTGCCTTGGAGCCTTTTATTTAGGGCCTCAAGCTCCTGGGCTGATGTaGTGGCTTCTTCCCTTTGTG +
Preference number: 4 (lower is better)
Translates to: ARPGVLHTCLGAFYLGPQAPGLM*WLLPFV
Trigger: CACAAAGGGAAGAAGCCACCACATCAGCCCAGGAGC...TTGAGGCCCTAAATAAAAGGCTCCAAGGCAAGTGTGTAGAACTCCAGGCCTCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR TCA 90 bp GCGAGGCCTGGAGTTCTACACACTTGCCTTGGAGCCTTTTATTTAGGGCCTCAATCACGGAGTTCCTGTTaGTGGACTTTGCGATCCTCC +
Preference number: 4 (lower is better)
Translates to: ARPGVLHTCLGAFYLGPQSRSSC*WTLRSS
Trigger: GGAGGATCGCAAAGTCCATCAACAGGAACTCCGTGA...TTGAGGCCCTAAATAAAAGGCTCCAAGGCAAGTGTGTAGAACTCCAGGCCTCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR TCA 90 bp AAGCAATTGCGTTCTTCAGTGAACTCTTTCTTTAGGCCAGTTGATGGCTTCTTATGGAACTCGCCCAGGTaGACCTCCAGGGCCCCCTCG +
Preference number: 4 (lower is better)
Translates to: KQLRSSVNSFFRPVDGFLWNSPR*TSRAPS
Trigger: CGAGGGGGCCCTGGAGGTTCACCTGGGCGAGTTCCA...TAAGAAGCCATCAACTGGCCTAAAGAAAGAGTTCACTGAAGAACGCAATTGCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR GCA 90 bp GCGAGGCCTGGAGTTCTACACACTTGCCTTGGAGCCTTTTATTTAGGGCCTCAAAAGATCTTCTTCACCTaGTGGGGCTTCGGGTCTGCA +
Preference number: 4 (lower is better)
Translates to: ARPGVLHTCLGAFYLGPQKIFFT*WGFGSA
Trigger: TGCAGACCCGAAGCCCCAGCAGGTGAAGAAGATCTT...TTGAGGCCCTAAATAAAAGGCTCCAAGGCAAGTGTGTAGAACTCCAGGCCTCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR GCA 90 bp GTGCACAGCACCATTACCCAGAGTGCAGGCTATGTCCAGGCTGGGCAGCAGCAATGTGATTTCAACATCTaGCTCCTGGCAAAAGACTTC +
Preference number: 4 (lower is better)
Translates to: VHSTITQSAGYVQAGQQQCDFNI*LLAKDF
Trigger: GAAGTCTTTTGCCAGGAGGCAGATGTTGAAATCACA...TTGCTGCTGCCCAGCCTGGACATAGCCTGCACTCTGGGTAATGGTGCTGTGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR GCA 90 bp GCGAGGCCTGGAGTTCTACACACTTGCCTTGGAGCCTTTTATTTAGGGCCTCAATTTAGGGCCTCAACTTaGCTGGCCTTGGCCCTTTTG +
Preference number: 4 (lower is better)
Translates to: ARPGVLHTCLGAFYLGPQFRAST*LALALL
Trigger: CAAAAGGGCCAAGGCCAGGCAAGTTGAGGCCCTAAA...TTGAGGCCCTAAATAAAAGGCTCCAAGGCAAGTGTGTAGAACTCCAGGCCTCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR GCA 90 bp GGCTCCTGGGCTGATGTGGTGGCTTCTTCCCTTTGTGCTGCTGAACATAGGGAAGTTCTCCAATGCCATTaGTACAGCAACCTCAAACCC +
Preference number: 4 (lower is better)
Translates to: GSWADVVASSLCAAEHREVLQCH*YSNLKP
Trigger: GGGTTTGAGGTTGCTGTAGCAATGGCATTGGAGAAC...TTCCCTATGTTCAGCAGCACAAAGGGAAGAAGCCACCACATCAGCCCAGGAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR CCA 90 bp GCGAGGCCTGGAGTTCTACACACTTGCCTTGGAGCCTTTTATTTAGGGCCTCAATCTTCGTCCCAGGTCTaGCTGTCATCTGACTCGATC +
Preference number: 4 (lower is better)
Translates to: ARPGVLHTCLGAFYLGPQSSSQV*LSSDSI
Trigger: GATCGAGTCAGATGACAGCCAGACCTGGGACGAAGA...TTGAGGCCCTAAATAAAAGGCTCCAAGGCAAGTGTGTAGAACTCCAGGCCTCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR CCA 90 bp TCGATGAGAATGTTCAAGTTAAAGTTCTCCAATGCCATTGCTACAGCAACCTCAGGAGCTGGGGCTGGGTaGAGTCCGTGGGCCTCAGCA +
Preference number: 4 (lower is better)
Translates to: SMRMFKLKFSNAIATATSGAGAG*SPWASA
Trigger: TGCTGAGGCCCACGGACTCCACCCAGCCCCAGCTCC...TGAGGTTGCTGTAGCAATGGCATTGGAGAACTTTAACTTGAACATTCTCATCGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR CCA 90 bp TCGATGAGAATGTTCAAGTTAAAGTTCTCCAATGCCATTGCTACAGCAACCTCATCCAGCTCCCGGAGCTaGGGCTGGGTGGAGTCCGTG +
Preference number: 4 (lower is better)
Translates to: SMRMFKLKFSNAIATATSSSSRS*GWVESV
Trigger: CACGGACTCCACCCAGCCCCAGCTCCGGGAGCTGGA...TGAGGTTGCTGTAGCAATGGCATTGGAGAACTTTAACTTGAACATTCTCATCGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR CCA 90 bp AAGCAATTGCGTTCTTCAGTGAACTCTTTCTTTAGGCCAGTTGATGGCTTCTTATCCAGCTCCCGGAGCTaGGGCTGGGTGGAGTCCGTG +
Preference number: 4 (lower is better)
Translates to: KQLRSSVNSFFRPVDGFLSSSRS*GWVESV
Trigger: CACGGACTCCACCCAGCCCCAGCTCCGGGAGCTGGA...TAAGAAGCCATCAACTGGCCTAAAGAAAGAGTTCACTGAAGAACGCAATTGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR CCA 90 bp CTCAACTTGCCTGGCCTTGGCCCTTTTGTAGGTGGCCACCTAGTTTGGCTCAGCTCCAGGAGGCATTCCTaGACCAGCCTTGATAAATTA +
Preference number: 4 (lower is better)
Translates to: LNLPGLGPFVGGHLVWLSSRRHS*TSLDKL
Trigger: TAATTTATCAAGGCTGGTCCAGGAATGCCTCCTGGA...GCTGAGCCAAACTAGGTGGCCACCTACAAAAGGGCCAAGGCCAGGCAAGTTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR CCA 90 bp CTCAACTTGCCTGGCCTTGGCCCTTTTGTAGGTGGCCACCTAGTTTGGCTCAGCTCTACACACTTGCCTTaGAGCCTTTTATTTAGGGCC +
Preference number: 4 (lower is better)
Translates to: LNLPGLGPFVGGHLVWLSSTHLP*SLLFRA
Trigger: GGCCCTAAATAAAAGGCTCCAAGGCAAGTGTGTAGA...GCTGAGCCAAACTAGGTGGCCACCTACAAAAGGGCCAAGGCCAGGCAAGTTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR GCA 90 bp GGCTCCTGGGCTGATGTGGTGGCTTCTTCCCTTTGTGCTGCTGAACATAGGGAACTCTTCAATGGATGTTaGCTTGCCGACCTTCTCAAA +
Preference number: 4 (lower is better)
Translates to: GSWADVVASSLCAAEHRELFNGC*LADLLK
Trigger: TTTGAGAAGGTCGGCAAGGCAACATCCATTGAAGAG...TTCCCTATGTTCAGCAGCACAAAGGGAAGAAGCCACCACATCAGCCCAGGAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR GCA 90 bp TCGATGAGAATGTTCAAGTTAAAGTTCTCCAATGCCATTGCTACAGCAACCTCATGCACACCCTCGGAGTaGCGTCCAGCTGGAGCAGCG +
Preference number: 4 (lower is better)
Translates to: SMRMFKLKFSNAIATATSCTPSE*RPAGAA
Trigger: CGCTGCTCCAGCTGGACGGCACTCCGAGGGTGTGCA...TGAGGTTGCTGTAGCAATGGCATTGGAGAACTTTAACTTGAACATTCTCATCGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR GCA 90 bp CTCAACTTGCCTGGCCTTGGCCCTTTTGTAGGTGGCCACCTAGTTTGGCTCAGCGTTAAAGTTCTCCAATaGCATTGCTACAGCAACCTC +
Preference number: 4 (lower is better)
Translates to: LNLPGLGPFVGGHLVWLSVKVLQ*HCYSNL
Trigger: GAGGTTGCTGTAGCAATGGCATTGGAGAACTTTAAC...GCTGAGCCAAACTAGGTGGCCACCTACAAAAGGGCCAAGGCCAGGCAAGTTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR CCA 90 bp AAGCAATTGCGTTCTTCAGTGAACTCTTTCTTTAGGCCAGTTGATGGCTTCTTAATCTCTCCCGGAAGCTaGGGGTGCTCGGGGGTGTCC +
Preference number: 4 (lower is better)
Translates to: KQLRSSVNSFFRPVDGFLISPGS*GCSGVS
Trigger: GGACACCCCCGAGCACCCCCAGCTTCCGGGAGAGAT...TAAGAAGCCATCAACTGGCCTAAAGAAAGAGTTCACTGAAGAACGCAATTGCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR CCA 90 bp AAGCAATTGCGTTCTTCAGTGAACTCTTTCTTTAGGCCAGTTGATGGCTTCTTACGGAAGCCGAGGACCTaGTACTCCAGCTCCCGGAGC +
Preference number: 4 (lower is better)
Translates to: KQLRSSVNSFFRPVDGFLRKPRT*YSSSRS
Trigger: GCTCCGGGAGCTGGAGTACCAGGTCCTCGGCTTCCG...TAAGAAGCCATCAACTGGCCTAAAGAAAGAGTTCACTGAAGAACGCAATTGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR CCA 90 bp AAGCAATTGCGTTCTTCAGTGAACTCTTTCTTTAGGCCAGTTGATGGCTTCTTAGGTTCAGCAGCGTCGTaGCAGGGCAGGACAGGACCC +
Preference number: 4 (lower is better)
Translates to: KQLRSSVNSFFRPVDGFLGSAAS*QGRTGP
Trigger: GGGTCCTGTCCTGCCCTGCCACGACGCTGCTGAACC...TAAGAAGCCATCAACTGGCCTAAAGAAAGAGTTCACTGAAGAACGCAATTGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR CCA 90 bp TCGATGAGAATGTTCAAGTTAAAGTTCTCCAATGCCATTGCTACAGCAACCTCAGGAGTGCCGTCCAGCTaGAGCAGCGCCCAGGCTCTT +
Preference number: 4 (lower is better)
Translates to: SMRMFKLKFSNAIATATSGVPSS*SSAQAL
Trigger: AAGAGCCTGGGCGCTGCTCCAGCTGGACGGCACTCC...TGAGGTTGCTGTAGCAATGGCATTGGAGAACTTTAACTTGAACATTCTCATCGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR CCA 90 bp AAGCAATTGCGTTCTTCAGTGAACTCTTTCTTTAGGCCAGTTGATGGCTTCTTACCCATGCCCTGGGGCTaGGTCAATGGCCGGAGTCTC +
Preference number: 4 (lower is better)
Translates to: KQLRSSVNSFFRPVDGFLPMPWG*VNGRSL
Trigger: GAGACTCCGGCCATTGACCCAGCCCCAGGGCATGGG...TAAGAAGCCATCAACTGGCCTAAAGAAAGAGTTCACTGAAGAACGCAATTGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR CCA 90 bp GGCTCCTGGGCTGATGTGGTGGCTTCTTCCCTTTGTGCTGCTGAACATAGGGAATCTACACACTTGCCTTaGAGCCTTTTATTTAGGGCC +
Preference number: 4 (lower is better)
Translates to: GSWADVVASSLCAAEHRESTHLP*SLLFRA
Trigger: GGCCCTAAATAAAAGGCTCCAAGGCAAGTGTGTAGA...TTCCCTATGTTCAGCAGCACAAAGGGAAGAAGCCACCACATCAGCCCAGGAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR TCA 90 bp CCGGCAGCGAGGCCTGGAGTTCTACACACTTGCCTTGGAGCCTTTTATTTAGGGAATTGCGTTCTTCAGTaGACTCTTTCTTTAGGCCAG +
Preference number: 4 (lower is better)
Translates to: PAARPGVLHTCLGAFYLGNCVLQ*TLSLGQ
Trigger: CTGGCCTAAAGAAAGAGTTCACTGAAGAACGCAATT...CCCTAAATAAAAGGCTCCAAGGCAAGTGTGTAGAACTCCAGGCCTCGCTGCCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR TCA 90 bp AAGCAATTGCGTTCTTCAGTGAACTCTTTCTTTAGGCCAGTTGATGGCTTCTTAATCCCCAGTGCCTCTTaGCGCAGAAGTGCCGAGCAG +
Preference number: 4 (lower is better)
Translates to: KQLRSSVNSFFRPVDGFLIPSAS*RRSAEQ
Trigger: CTGCTCGGCACTTCTGCGTCAAGAGGCACTGGGGAT...TAAGAAGCCATCAACTGGCCTAAAGAAAGAGTTCACTGAAGAACGCAATTGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR GCA 90 bp AAGCAATTGCGTTCTTCAGTGAACTCTTTCTTTAGGCCAGTTGATGGCTTCTTAGATGTCACACGTCACTaGACCCACAGCCAGCGAGCC +
Preference number: 4 (lower is better)
Translates to: KQLRSSVNSFFRPVDGFLDVTRH*THSQRA
Trigger: GGCTCGCTGGCTGTGGGTGCAGTGACGTGTGACATC...TAAGAAGCCATCAACTGGCCTAAAGAAAGAGTTCACTGAAGAACGCAATTGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR GCA 90 bp GCGAGGCCTGGAGTTCTACACACTTGCCTTGGAGCCTTTTATTTAGGGCCTCAACAATGGATGTTGCCTTaGCGACCTTCTCAAAGTCAA +
Preference number: 4 (lower is better)
Translates to: ARPGVLHTCLGAFYLGPQQWMLP*RPSQSQ
Trigger: TTGACTTTGAGAAGGTCGGCAAGGCAACATCCATTG...TTGAGGCCCTAAATAAAAGGCTCCAAGGCAAGTGTGTAGAACTCCAGGCCTCGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR CCA 90 bp TCGATGAGAATGTTCAAGTTAAAGTTCTCCAATGCCATTGCTACAGCAACCTCAACTTGCCCGTGGGGCTaGGTGACACCAGGAAGCTCT +
Preference number: 4 (lower is better)
Translates to: SMRMFKLKFSNAIATATSTCPWG*VTPGSS
Trigger: AGAGCTTCCTGGTGTCACCCAGCCCCACGGGCAAGT...TGAGGTTGCTGTAGCAATGGCATTGGAGAACTTTAACTTGAACATTCTCATCGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR CCA 90 bp GCGAGGCCTGGAGTTCTACACACTTGCCTTGGAGCCTTTTATTTAGGGCCTCAATTGATTGATTGCATTTaGGTGCGGATGGCCAAAGTG +
Preference number: 4 (lower is better)
Translates to: ARPGVLHTCLGAFYLGPQLIDCI*VRMAKV
Trigger: CACTTTGGCCATCCGCACCCAAATGCAATCAATCAA...TTGAGGCCCTAAATAAAAGGCTCCAAGGCAAGTGTGTAGAACTCCAGGCCTCGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR CCA 90 bp TCGATGAGAATGTTCAAGTTAAAGTTCTCCAATGCCATTGCTACAGCAACCTCAGCCGGGACTCTTATCTaGCCTGTGTCAGGGTGCAGG +
Preference number: 4 (lower is better)
Translates to: SMRMFKLKFSNAIATATSAGTLI*PVSGCR
Trigger: CCTGCACCCTGACACAGGCCAGATAAGAGTCCCGGC...TGAGGTTGCTGTAGCAATGGCATTGGAGAACTTTAACTTGAACATTCTCATCGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327979.8
CDS-3UTR TCA 90 bp TCGATGAGAATGTTCAAGTTAAAGTTCTCCAATGCCATTGCTACAGCAACCTCACATGCAGCGTGGGGATaGAGGCCTTCTCCTCTTCGT +
Preference number: 4 (lower is better)
Translates to: SMRMFKLKFSNAIATATSHAAWG*RPSPLR
Trigger: ACGAAGAGGAGAAGGCCTTCATCCCCACGCTGCATG...TGAGGTTGCTGTAGCAATGGCATTGGAGAACTTTAACTTGAACATTCTCATCGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR GCA 90 bp GCGAGGCCTGGAGTTCTACACACTTGCCTTGGAGCCTTTTATTTAGGGCCTCAAACCCTAGGTTCTCTCTaGACTATTAACACAGACATC +
Preference number: 4 (lower is better)
Translates to: ARPGVLHTCLGAFYLGPQTLGSL*TINTDI
Trigger: GATGTCTGTGTTAATAGTGCAGAGAGAACCTAGGGT...TTGAGGCCCTAAATAAAAGGCTCCAAGGCAAGTGTGTAGAACTCCAGGCCTCGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR CCA 90 bp AAGCAATTGCGTTCTTCAGTGAACTCTTTCTTTAGGCCAGTTGATGGCTTCTTACTCCTGGTGTCTTTGTaGCGTCCAGACAGGTGGTCC +
Preference number: 4 (lower is better)
Translates to: KQLRSSVNSFFRPVDGFLLLVSL*RPDRWS
Trigger: GGACCACCTGTCTGGACGCCACAAAGACACCAGGAG...TAAGAAGCCATCAACTGGCCTAAAGAAAGAGTTCACTGAAGAACGCAATTGCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR CCA 90 bp TCGATGAGAATGTTCAAGTTAAAGTTCTCCAATGCCATTGCTACAGCAACCTCAGGGCCTCAACTTGCCTaGCCTTGGCCCTTTTGTAGG +
Preference number: 4 (lower is better)
Translates to: SMRMFKLKFSNAIATATSGPQLA*PWPFCR
Trigger: CCTACAAAAGGGCCAAGGCCAGGCAAGTTGAGGCCC...TGAGGTTGCTGTAGCAATGGCATTGGAGAACTTTAACTTGAACATTCTCATCGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR TCA 90 bp TCGATGAGAATGTTCAAGTTAAAGTTCTCCAATGCCATTGCTACAGCAACCTCACCAAGCCTTTCATCCTaGTGTGGAACTCGCCCAGGT +
Preference number: 4 (lower is better)
Translates to: SMRMFKLKFSNAIATATSPSLSS*CGTRPG
Trigger: ACCTGGGCGAGTTCCACATCAGGATGAAAGGCTTGG...TGAGGTTGCTGTAGCAATGGCATTGGAGAACTTTAACTTGAACATTCTCATCGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR TCA 90 bp AAGCAATTGCGTTCTTCAGTGAACTCTTTCTTTAGGCCAGTTGATGGCTTCTTAATCTCAGGCAGCTCCTaGCTCTGGCTTCTTAGGCTG +
Preference number: 4 (lower is better)
Translates to: KQLRSSVNSFFRPVDGFLISGSS*LWLLRL
Trigger: CAGCCTAAGAAGCCAGAGTCAGGAGCTGCCTGAGAT...TAAGAAGCCATCAACTGGCCTAAAGAAAGAGTTCACTGAAGAACGCAATTGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR TCA 90 bp AAGCAATTGCGTTCTTCAGTGAACTCTTTCTTTAGGCCAGTTGATGGCTTCTTAGCTGGAAGGTTTTCTTaGGCTGGTTCAGCAGCGTCG +
Preference number: 4 (lower is better)
Translates to: KQLRSSVNSFFRPVDGFLAGRFS*AGSAAS
Trigger: CGACGCTGCTGAACCAGCTCAAGAAAACCTTCCAGC...TAAGAAGCCATCAACTGGCCTAAAGAAAGAGTTCACTGAAGAACGCAATTGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR GCA 90 bp TCGATGAGAATGTTCAAGTTAAAGTTCTCCAATGCCATTGCTACAGCAACCTCATCAAACGGGTTCCACTaGACCTCCAGCTGCAGCTTG +
Preference number: 4 (lower is better)
Translates to: SMRMFKLKFSNAIATATSSNGFH*TSSCSL
Trigger: CAAGCTGCAGCTGGAGGTGCAGTGGAACCCGTTTGA...TGAGGTTGCTGTAGCAATGGCATTGGAGAACTTTAACTTGAACATTCTCATCGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR GCA 90 bp TCGATGAGAATGTTCAAGTTAAAGTTCTCCAATGCCATTGCTACAGCAACCTCAGGGGAGGCCAGTTTCTaGAGCAGAGCTTTGCAGACT +
Preference number: 4 (lower is better)
Translates to: SMRMFKLKFSNAIATATSGEASF*SRALQT
Trigger: AGTCTGCAAAGCTCTGCTGCAGAAACTGGCCTCCCC...TGAGGTTGCTGTAGCAATGGCATTGGAGAACTTTAACTTGAACATTCTCATCGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR CCA 90 bp AAGCAATTGCGTTCTTCAGTGAACTCTTTCTTTAGGCCAGTTGATGGCTTCTTAGGTGGTCACCTTTGGTaGCAGACAGGACAGCCTCTT +
Preference number: 4 (lower is better)
Translates to: KQLRSSVNSFFRPVDGFLGGHLW*QTGQPL
Trigger: AAGAGGCTGTCCTGTCTGCCACCAAAGGTGACCACC...TAAGAAGCCATCAACTGGCCTAAAGAAAGAGTTCACTGAAGAACGCAATTGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000045083.6
CDS-3UTR CCA 90 bp TCGATGAGAATGTTCAAGTTAAAGTTCTCCAATGCCATTGCTACAGCAACCTCAAATGATCTGTTCTTCTaGGAGCCCAGCTCCGGGGAG +
Preference number: 4 (lower is better)
Translates to: SMRMFKLKFSNAIATATSNDLFF*EPSSGE
Trigger: CTCCCCGGAGCTGGGCTCCCAGAAGAACAGATCATT...TGAGGTTGCTGTAGCAATGGCATTGGAGAACTTTAACTTGAACATTCTCATCGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR CCA 90 bp AAGCAATTGCGTTCTTCAGTGAACTCTTTCTTTAGGCCAGTTGATGGCTTCTTATCTCAGGTAGAGCTCTaGGCAGCTCACACTCCTGGA +
Preference number: 4 (lower is better)
Translates to: KQLRSSVNSFFRPVDGFLSQVEL*AAHTPG
Trigger: TCCAGGAGTGTGAGCTGCCCAGAGCTCTACCTGAGA...TAAGAAGCCATCAACTGGCCTAAAGAAAGAGTTCACTGAAGAACGCAATTGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR CCA 90 bp AAGCAATTGCGTTCTTCAGTGAACTCTTTCTTTAGGCCAGTTGATGGCTTCTTACACCAAGGTGACACCTaGCTGCTGCTGAAATGGCCT +
Preference number: 4 (lower is better)
Translates to: KQLRSSVNSFFRPVDGFLHQGDT*LLLKWP
Trigger: AGGCCATTTCAGCAGCAGCCAGGTGTCACCTTGGTG...TAAGAAGCCATCAACTGGCCTAAAGAAAGAGTTCACTGAAGAACGCAATTGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR CCA 90 bp TCGATGAGAATGTTCAAGTTAAAGTTCTCCAATGCCATTGCTACAGCAACCTCACCTGGGCTGATGTGGTaGCTTCTTCCCTTTGTGCTG +
Preference number: 4 (lower is better)
Translates to: SMRMFKLKFSNAIATATSPGLMW*LLPFVL
Trigger: CAGCACAAAGGGAAGAAGCCACCACATCAGCCCAGG...TGAGGTTGCTGTAGCAATGGCATTGGAGAACTTTAACTTGAACATTCTCATCGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR TCA 90 bp TCGATGAGAATGTTCAAGTTAAAGTTCTCCAATGCCATTGCTACAGCAACCTCATCACGGAGTTCCTGTTaGTGGACTTTGCGATCCTCC +
Preference number: 4 (lower is better)
Translates to: SMRMFKLKFSNAIATATSSRSSC*WTLRSS
Trigger: GGAGGATCGCAAAGTCCATCAACAGGAACTCCGTGA...TGAGGTTGCTGTAGCAATGGCATTGGAGAACTTTAACTTGAACATTCTCATCGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR TCA 90 bp TCGATGAGAATGTTCAAGTTAAAGTTCTCCAATGCCATTGCTACAGCAACCTCAGCAACTCCGTCACCTTaGTGTCCAGGTTCTCATGCA +
Preference number: 4 (lower is better)
Translates to: SMRMFKLKFSNAIATATSATPSP*CPGSHA
Trigger: TGCATGAGAACCTGGACATCAAGGTGACGGAGTTGC...TGAGGTTGCTGTAGCAATGGCATTGGAGAACTTTAACTTGAACATTCTCATCGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR CCA 90 bp TCGATGAGAATGTTCAAGTTAAAGTTCTCCAATGCCATTGCTACAGCAACCTCATCTTCGTCCCAGGTCTaGCTGTCATCTGACTCGATC +
Preference number: 4 (lower is better)
Translates to: SMRMFKLKFSNAIATATSSSSQV*LSSDSI
Trigger: GATCGAGTCAGATGACAGCCAGACCTGGGACGAAGA...TGAGGTTGCTGTAGCAATGGCATTGGAGAACTTTAACTTGAACATTCTCATCGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR GCA 90 bp AAGCAATTGCGTTCTTCAGTGAACTCTTTCTTTAGGCCAGTTGATGGCTTCTTATCCATCTTCCGAATGTaGCTTTCCACACAGCGCGTT +
Preference number: 4 (lower is better)
Translates to: KQLRSSVNSFFRPVDGFLSIFRM*LSTQRV
Trigger: AACGCGCTGTGTGGAAAGGCACATTCGGAAGATGGA...TAAGAAGCCATCAACTGGCCTAAAGAAAGAGTTCACTGAAGAACGCAATTGCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR GCA 90 bp AAGCAATTGCGTTCTTCAGTGAACTCTTTCTTTAGGCCAGTTGATGGCTTCTTAAGTGTCTCCAGAACGTaGTTTTGCTGTGCCACTTCT +
Preference number: 4 (lower is better)
Translates to: KQLRSSVNSFFRPVDGFLSVSRT*FCCATS
Trigger: AGAAGTGGCACAGCAAAAGCACGTTCTGGAGACACT...TAAGAAGCCATCAACTGGCCTAAAGAAAGAGTTCACTGAAGAACGCAATTGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR TCA 90 bp TCGATGAGAATGTTCAAGTTAAAGTTCTCCAATGCCATTGCTACAGCAACCTCATTCTTAGCAGTTTATTaGCGAGATCCTAGGGTAGCT +
Preference number: 4 (lower is better)
Translates to: SMRMFKLKFSNAIATATSFLAVY*RDPRVA
Trigger: AGCTACCCTAGGATCTCGTCAATAAACTGCTAAGAA...TGAGGTTGCTGTAGCAATGGCATTGGAGAACTTTAACTTGAACATTCTCATCGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS GCA 90 bp CTGCACCAGCCAGGCGAGCGCTGGCCGCCCTGCACACCCTCGGAGTaGCGTCCAGCTGGAGCAGCGCCCAGGCTCTTAAGGTCTGGGGCA +
Preference number: 5 (lower is better)
Translates to: LHQPGERWPPCTPSE*RPAGAAPRLLRSGA
Trigger: TGCCCCAGACCTTAAGAGCCTGGGCGCTGCTCCAGCTGGACGGCACTCCGAGGGTGTGCAGGGCGGCCAGCGCTCGCCTGGCTGGTGCAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000045083.6
ENST00000327979.8
ENST00000488529.5
CDS CCA 90 bp TGCCGTGCTCTGCAGGGCTTCAGCCGGTCCCGGAAGCCGAGGACCTaGTACTCCAGCTCCCGGAGCTGGGGCTGGGTGGAGTCCGTGGGC +
Preference number: 5 (lower is better)
Translates to: CRALQGFSRSRKPRT*YSSSRSWGWVESVG
Trigger: GCCCACGGACTCCACCCAGCCCCAGCTCCGGGAGCTGGAGTACCAGGTCCTCGGCTTCCGGGACCGGCTGAAGCCCTGCAGAGCACGGCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000045083.6
ENST00000327979.8
ENST00000462493.1
CDS CCA 90 bp AGGCGAGCGCTGGCCGCCCTGCACACCCTCGGAGTGCCGTCCAGCTaGAGCAGCGCCCAGGCTCTTAAGGTCTGGGGCAGAGGCTGGAGC +
Preference number: 5 (lower is better)
Translates to: RRALAALHTLGVPSS*SSAQALKVWGRGWS
Trigger: GCTCCAGCCTCTGCCCCAGACCTTAAGAGCCTGGGCGCTGCTCCAGCTGGACGGCACTCCGAGGGTGTGCAGGGCGGCCAGCGCTCGCCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000045083.6
ENST00000327979.8
ENST00000488529.5
CDS CCA 90 bp AGCCGGTCCCGGAAGCCGAGGACCTGGTACTCCAGCTCCCGGAGCTaGGGCTGGGTGGAGTCCGTGGGCCTCAGCAACTCCAGGACCTCC +
Preference number: 5 (lower is better)
Translates to: SRSRKPRTWYSSSRS*GWVESVGLSNSRTS
Trigger: GGAGGTCCTGGAGTTGCTGAGGCCCACGGACTCCACCCAGCCCCAGCTCCGGGAGCTGGAGTACCAGGTCCTCGGCTTCCGGGACCGGCT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000045083.6
ENST00000327979.8
ENST00000462493.1
CDS GCA 90 bp TCAGCAGCGTCGTGGCAGGGCAGGACAGGACCCTGCCAGGCCCTGTaGACCCTCTCCACAGCTTCAGGCACCCCTTCGTCCGCGAGGCCT +
Preference number: 5 (lower is better)
Translates to: SAASWQGRTGPCQAL*TLSTASGTPSSARP
Trigger: AGGCCTCGCGGACGAAGGGGTGCCTGAAGCTGTGGAGAGGGTGCACAGGGCCTGGCAGGGTCCTGTCCTGCCCTGCCACGACGCTGCTGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000045083.6
ENST00000327979.8
ENST00000482129.1
ENST00000488529.5
CDS GCA 90 bp CAGCCGCTGGTCCCGCTCTCTGGGAAGATCGCCTTGAGGACCTGCTaGGCCCCGAGTCTTCCTTCTGGTGCAGGGAGGCCGGTGCCCTGC +
Preference number: 5 (lower is better)
Translates to: QPLVPLSGKIALRTC*APSLPSGAGRPVPC
Trigger: GCAGGGCACCGGCCTCCCTGCACCAGAAGGAAGACTCGGGGCGCAGCAGGTCCTCAAGGCGATCTTCCCAGAGAGCGGGACCAGCGGCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327979.8
CDS GCA 90 bp CACCAGCCGCTGGTCCCGCTCTCTGGGAAGATCGCCTTGAGGACCTaGTGCGCCCCGAGTCTTCCTTCTGGTGCAGGGAGGCCGGTGCCC +
Preference number: 5 (lower is better)
Translates to: HQPLVPLSGKIALRT*CAPSLPSGAGRPVP
Trigger: GGGCACCGGCCTCCCTGCACCAGAAGGAAGACTCGGGGCGCAGCAGGTCCTCAAGGCGATCTTCCCAGAGAGCGGGACCAGCGGCTGGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327979.8
CDS CCA 90 bp GCCAGGCTGCTCTGCAAACGGGCCTCCAGAGAGGTGGGCCATCTCTaGCAGGAGACCTGGGGGCAGGGGGTCCTCCCGAGCCTCCTCTTC +
Preference number: 5 (lower is better)
Translates to: ARLLCKRASREVGHL*QETWGQGVLPSLLF
Trigger: GAAGAGGAGGCTCGGGAGGACCCCCTGCCCCCAGGTCTCCTGCCAGAGATGGCCCACCTCTCTGGAGGCCCGTTTGCAGAGCAGCCTGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000045083.6
ENST00000327979.8
ENST00000462493.1
CDS CCA 90 bp GGCCCGTCCTCTCTGTCCCCGGTTGCCCCTTCCTCGTGGCCGTTCTaGCTACTCGAGGCTGTGCCGCTGTGGAACAGGGAGCCCTGTGGC +
Preference number: 5 (lower is better)
Translates to: GPSSLSPVAPSSWPF*LLEAVPLWNREPCG
Trigger: GCCACAGGGCTCCCTGTTCCACAGCGGCACAGCCTCGAGTAGCCAGAACGGCCACGAGGAAGGGGCAACCGGGGACAGAGAGGACGGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000045083.6
ENST00000327979.8
ENST00000462493.1
CDS CCA 90 bp GCCACGCCAGGCCCGTCCTCTCTGTCCCCGGTTGCCCCTTCCTCGTaGCCGTTCTGGCTACTCGAGGCTGTGCCGCTGTGGAACAGGGAG +
Preference number: 5 (lower is better)
Translates to: ATPGPSSLSPVAPSS*PFWLLEAVPLWNRE
Trigger: CTCCCTGTTCCACAGCGGCACAGCCTCGAGTAGCCAGAACGGCCACGAGGAAGGGGCAACCGGGGACAGAGAGGACGGGCCTGGCGTGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000045083.6
ENST00000327979.8
ENST00000462493.1
CDS CCA 90 bp GGAAGCCGAGGACCTGGTACTCCAGCTCCCGGAGCTGGGGCTGGGTaGAGTCCGTGGGCCTCAGCAACTCCAGGACCTCCTGCAGAGGCC +
Preference number: 5 (lower is better)
Translates to: GSRGPGTPAPGAGAG*SPWASATPGPPAEA
Trigger: GGCCTCTGCAGGAGGTCCTGGAGTTGCTGAGGCCCACGGACTCCACCCAGCCCCAGCTCCGGGAGCTGGAGTACCAGGTCCTCGGCTTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000045083.6
ENST00000327979.8
ENST00000462493.1
CDS GCA 90 bp CGTGGAGCTCGGGTCACCCGGTGGGAGTGGTGGCCACTGGGTCACTaGTGGAAGGAGGTGCACTCACCGGAGACCCTGGGAGCCCCCAAA +
Preference number: 5 (lower is better)
Translates to: RGARVTRWEWWPLGH*WKEVHSPETLGAPK
Trigger: TTTGGGGGCTCCCAGGGTCTCCGGTGAGTGCACCTCCTTCCAGCAGTGACCCAGTGGCCACCACTCCCACCGGGTGACCCGAGCTCCACG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000462493.1
CDS CCA 90 bp TCCCGGAAGCCGAGGACCTGGTACTCCAGCTCCCGGAGCTGGGGCTaGGTGGAGTCCGTGGGCCTCAGCAACTCCAGGACCTCCTGCAGA +
Preference number: 5 (lower is better)
Translates to: SRKPRTWYSSSRSWG*VESVGLSNSRTSCR
Trigger: TCTGCAGGAGGTCCTGGAGTTGCTGAGGCCCACGGACTCCACCCAGCCCCAGCTCCGGGAGCTGGAGTACCAGGTCCTCGGCTTCCGGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000045083.6
ENST00000327979.8
ENST00000462493.1
CDS CCA 90 bp TGGAGCAGCGCCCAGGCTCTTAAGGTCTGGGGCAGAGGCTGGAGCTaGCCCAGCCGCTTCCCCTGCAGCTTCCGGACCACCTTGGCCTGT +
Preference number: 5 (lower is better)
Translates to: WSSAQALKVWGRGWS*PSRFPCSFRTTLAC
Trigger: ACAGGCCAAGGTGGTCCGGAAGCTGCAGGGGAAGCGGCTGGGCCAGCTCCAGCCTCTGCCCCAGACCTTAAGAGCCTGGGCGCTGCTCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000045083.6
ENST00000327979.8
ENST00000488529.5
CDS CCA 90 bp TCCAGCTGGAGCAGCGCCCAGGCTCTTAAGGTCTGGGGCAGAGGCTaGAGCTGGCCCAGCCGCTTCCCCTGCAGCTTCCGGACCACCTTG +
Preference number: 5 (lower is better)
Translates to: SSWSSAQALKVWGRG*SWPSRFPCSFRTTL
Trigger: CAAGGTGGTCCGGAAGCTGCAGGGGAAGCGGCTGGGCCAGCTCCAGCCTCTGCCCCAGACCTTAAGAGCCTGGGCGCTGCTCCAGCTGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000045083.6
ENST00000327979.8
ENST00000488529.5
CDS CCA 90 bp GGGGAGGCTGGCAGGAAACGTGGAGCTCGGGTCACCCGGTGGGAGTaGTGGCCACTGGGTCACTGCTGGAAGGAGGTGCACTCACCGGAG +
Preference number: 5 (lower is better)
Translates to: GEAGRKRGARVTRWE*WPLGHCWKEVHSPE
Trigger: CTCCGGTGAGTGCACCTCCTTCCAGCAGTGACCCAGTGGCCACCACTCCCACCGGGTGACCCGAGCTCCACGTTTCCTGCCAGCCTCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462493.1
CDS GCA 90 bp GTTGATGGACTTTGCGATCCTCCGGCTCTGTGCACTGCTGAAGCCTaGGAAGGAGGCGCTCCGGCCCACGACCCCCACGGCCCCTGTGTC +
Preference number: 5 (lower is better)
Translates to: VDGLCDPPALCTAEA*EGGAPAHDPHGPCV
Trigger: GACACAGGGGCCGTGGGGGTCGTGGGCCGGAGCGCCTCCTTCGCAGGCTTCAGCAGTGCACAGAGCCGGAGGATCGCAAAGTCCATCAAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000045083.6
ENST00000327979.8
ENST00000462493.1
CDS GCA 90 bp GACCTGCGGCCGCGTCGTGAAGAAGTCGGCGATGTCACACGTCACTaGACCCACAGCCAGCGAGCCCAGGCCCCGCAACTCCGTCACCTT +
Preference number: 5 (lower is better)
Translates to: DLRPRREEVGDVTRH*THSQRAQAPQLRHL
Trigger: AAGGTGACGGAGTTGCGGGGCCTGGGCTCGCTGGCTGTGGGTGCAGTGACGTGTGACATCGCCGACTTCTTCACGACGCGGCCGCAGGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000045083.6
ENST00000327979.8
ENST00000462493.1
CDS CCA 90 bp TGCAAACGGGCCTCCAGAGAGGTGGGCCATCTCTGGCAGGAGACCTaGGGGCAGGGGGTCCTCCCGAGCCTCCTCTTCAATGGAGGCGTG +
Preference number: 5 (lower is better)
Translates to: CKRASREVGHLWQET*GQGVLPSLLFNGGV
Trigger: CACGCCTCCATTGAAGAGGAGGCTCGGGAGGACCCCCTGCCCCCAGGTCTCCTGCCAGAGATGGCCCACCTCTCTGGAGGCCCGTTTGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000045083.6
ENST00000327979.8
ENST00000462493.1
CDS CCA 90 bp GCCGGTGCCCTGCCGGGCTCTGATAATGCAGCCGGGACTCTTATCTaGCCTGTGTCAGGGTGCAGGCGGCCATGGAGCTGGGGTTCCAGG +
Preference number: 5 (lower is better)
Translates to: AGALPGSDNAAGTLI*PVSGCRRPWSWGSR
Trigger: CCTGGAACCCCAGCTCCATGGCCGCCTGCACCCTGACACAGGCCAGATAAGAGTCCCGGCTGCATTATCAGAGCCCGGCAGGGCACCGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327979.8
CDS CCA 90 bp GCAGGAAACGTGGAGCTCGGGTCACCCGGTGGGAGTGGTGGCCACTaGGTCACTGCTGGAAGGAGGTGCACTCACCGGAGACCCTGGGAG +
Preference number: 5 (lower is better)
Translates to: AGNVELGSPGGSGGH*VTAGRRCTHRRPWE
Trigger: CTCCCAGGGTCTCCGGTGAGTGCACCTCCTTCCAGCAGTGACCCAGTGGCCACCACTCCCACCGGGTGACCCGAGCTCCACGTTTCCTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462493.1
CDS-3UTR CAA 90 bp CTGCATCCCCAGTGCCTCTTGACGCAGAAGTGCCGAGCAGCTGACCGGCAGCGACGGCCTGCTGGAGCCTaGCGTCGTTCTCTGCCAGGG +
Preference number: 5 (lower is better)
Translates to: LHPQCLLTQKCRAADRQRRPAGA*RRSLPG
Trigger: CCCTGGCAGAGAACGACGCAAGGCTCCAGCAGGCCG...TCGCTGCCGGTCAGCTGCTCGGCACTTCTGCGTCAAGAGGCACTGGGGATGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS GCA 90 bp TGTGGCAGGCTGGGGCTCTCCCCTCCTAAGTTCCTCCAGCCAGGCTaGTCTGCAAACGGGCCTCCAGAGAGGTGGGCCATCTCTGGCAGG +
Preference number: 5 (lower is better)
Translates to: CGRLGLSPPKFLQPG*SANGPPERWAISGR
Trigger: CCTGCCAGAGATGGCCCACCTCTCTGGAGGCCCGTTTGCAGAGCAGCCTGGCTGGAGGAACTTAGGAGGGGAGAGCCCCAGCCTGCCACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000045083.6
ENST00000327979.8
ENST00000462493.1
CDS GCA 90 bp TCTGCTCCCATCTGGCCCGGGACTCCCGGACTCGAGCTAGGGCTCTaGAAATTCCATCCACACTGGCCACCAGCCGCTGGTCCCGCTCTC +
Preference number: 5 (lower is better)
Translates to: SAPIWPGTPGLELGL*KFHPHWPPAAGPAL
Trigger: GAGAGCGGGACCAGCGGCTGGTGGCCAGTGTGGATGGAATTTGCAGAGCCCTAGCTCGAGTCCGGGAGTCCCGGGCCAGATGGGAGCAGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327979.8
CDS GCA 90 bp TCACCCGGTGGGAGTGGTGGCCACTGGGTCACTGCTGGAAGGAGGTaGACTCACCGGAGACCCTGGGAGCCCCCAAACAGGGACAGCTCA +
Preference number: 5 (lower is better)
Translates to: SPGGSGGHWVTAGRR*THRRPWEPPNRDSS
Trigger: TGAGCTGTCCCTGTTTGGGGGCTCCCAGGGTCTCCGGTGAGTGCACCTCCTTCCAGCAGTGACCCAGTGGCCACCACTCCCACCGGGTGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000462493.1
CDS CCA 90 bp GGCCACTGGGTCACTGCTGGAAGGAGGTGCACTCACCGGAGACCCTaGGAGCCCCCAAACAGGGACAGCTCATCCAGGGCGAAGTCGGCA +
Preference number: 5 (lower is better)
Translates to: GHWVTAGRRCTHRRP*EPPNRDSSSRAKSA
Trigger: TGCCGACTTCGCCCTGGATGAGCTGTCCCTGTTTGGGGGCTCCCAGGGTCTCCGGTGAGTGCACCTCCTTCCAGCAGTGACCCAGTGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000462493.1
CDS CCA 90 bp ACAGACGGGGAGGCTGGCAGGAAACGTGGAGCTCGGGTCACCCGGTaGGAGTGGTGGCCACTGGGTCACTGCTGGAAGGAGGTGCACTCA +
Preference number: 5 (lower is better)
Translates to: TDGEAGRKRGARVTR*EWWPLGHCWKEVHS
Trigger: TGAGTGCACCTCCTTCCAGCAGTGACCCAGTGGCCACCACTCCCACCGGGTGACCCGAGCTCCACGTTTCCTGCCAGCCTCCCCGTCTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462493.1
CDS GCA 90 bp GGCTGGAGGAAGCAGAGTCTACTCCCGCTAAGTCTGTCCGCTCACTaGTGGCCAAAGCTGCCCTGCGTCTCCTCCCCACCGCCAGCCAGA +
Preference number: 5 (lower is better)
Translates to: GWRKQSLLPLSLSAH*WPKLPCVSSPPPAR
Trigger: TCTGGCTGGCGGTGGGGAGGAGACGCAGGGCAGCTTTGGCCAGCAGTGAGCGGACAGACTTAGCGGGAGTAGACTCTGCTTCCTCCAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000462493.1
CDS GCA 90 bp TGCTGCGCCCCGAGTCTTCCTTCTGGTGCAGGGAGGCCGGTGCCCTaGCGGGCTCTGATAATGCAGCCGGGACTCTTATCTGGCCTGTGT +
Preference number: 5 (lower is better)
Translates to: CCAPSLPSGAGRPVP*RALIMQPGLLSGLC
Trigger: ACACAGGCCAGATAAGAGTCCCGGCTGCATTATCAGAGCCCGGCAGGGCACCGGCCTCCCTGCACCAGAAGGAAGACTCGGGGCGCAGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327979.8
CDS GCA 90 bp CTCCTTGCAGCTGCCTCACTTTCCCTATTGCCGCCAGCAAGCGTCTaGTCCCATCTGGCCCGGGACTCCCGGACTCGAGCTAGGGCTCTG +
Preference number: 5 (lower is better)
Translates to: LLAAASLSLLPPASV*SHLARDSRTRARAL
Trigger: CAGAGCCCTAGCTCGAGTCCGGGAGTCCCGGGCCAGATGGGAGCAGACGCTTGCTGGCGGCAATAGGGAAAGTGAGGCAGCTGCAAGGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327979.8
CDS-3UTR CAA 90 bp GCCGCCGTCTGTGAGCTCCACCAGCACTCGCAGCAAGTCAGTCGGGCTGAGAGTGACTCGATCCGACCCTaGAGCTTCCAACGCTGGCGG +
Preference number: 5 (lower is better)
Translates to: AAVCELHQHSQQVSRAESDSIRP*SFQRWR
Trigger: CCGCCAGCGTTGGAAGCTCAAGGGTCGGATCGAGTC...ACTCTCAGCCCGACTGACTTGCTGCGAGTGCTGGTGGAGCTCACAGACGGCGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR CAA 90 bp TGGGCAGCTCACACTCCTGGAGGAGTGCACAGCACCATTACCCAGAGTGCAGGCCCTCTCTGTCCCCGGTaGCCCCTTCCTCGTGGCCGT +
Preference number: 5 (lower is better)
Translates to: WAAHTPGGVHSTITQSAGPLCPR*PLPRGR
Trigger: ACGGCCACGAGGAAGGGGCAACCGGGGACAGAGAGG...GCCTGCACTCTGGGTAATGGTGCTGTGCACTCCTCCAGGAGTGTGAGCTGCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR CAA 90 bp TGGGCAGCTCACACTCCTGGAGGAGTGCACAGCACCATTACCCAGAGTGCAGGCCGGCCTGCTGGAGCCTaGCGTCGTTCTCTGCCAGGG +
Preference number: 5 (lower is better)
Translates to: WAAHTPGGVHSTITQSAGRPAGA*RRSLPG
Trigger: CCCTGGCAGAGAACGACGCAAGGCTCCAGCAGGCCG...GCCTGCACTCTGGGTAATGGTGCTGTGCACTCCTCCAGGAGTGTGAGCTGCCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR CAA 90 bp CAGTGCCTCTTGACGCAGAAGTGCCGAGCAGCTGACCGGCAGCGAGGCCTGGAGTCTGGACGCGGCCGATaGCTTGTCAGTGTCACTCCC +
Preference number: 5 (lower is better)
Translates to: QCLLTQKCRAADRQRGLESGRGR*LVSVTP
Trigger: GGGAGTGACACTGACAAGCAATCGGCCGCGTCCAGA...CTCCAGGCCTCGCTGCCGGTCAGCTGCTCGGCACTTCTGCGTCAAGAGGCACTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327979.8
CDS-3UTR CAA 90 bp CCTCTGTACAAAAGACCAGCCCATGCCCTGGGGCTGGGTCAATGGCCGGAGTCTGTCCCGCCGCCCTCCTaGCAGCTGCCTCACTTTCCC +
Preference number: 5 (lower is better)
Translates to: PLYKRPAHALGLGQWPESVPPPS*QLPHFP
Trigger: GGGAAAGTGAGGCAGCTGCAAGGAGGGCGGCGGGAC...AGACTCCGGCCATTGACCCAGCCCCAGGGCATGGGCTGGTCTTTTGTACAGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327979.8
CDS TCA 90 bp GGAGGTGTACCATCAGCAGCACGTCCAGCTCTGGGGCACCGGCTGTaGGTTCCCTGGATGACGCTTTCAGTGATGACGGTGGGGGCAGGG +
Preference number: 5 (lower is better)
Translates to: GGVPSAARPALGHRL*VPWMTLSVMTVGAG
Trigger: CCCTGCCCCCACCGTCATCACTGAAAGCGTCATCCAGGGAACTCACAGCCGGTGCCCCAGAGCTGGACGTGCTGCTGATGGTACACCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000045083.6
ENST00000327979.8
ENST00000488529.5
CDS GCA 90 bp GCAGGTCTGGACACTCGAGTGCAGTCCCGCCGCCCTCCTTGCAGCTaGCTCACTTTCCCTATTGCCGCCAGCAAGCGTCTGCTCCCATCT +
Preference number: 5 (lower is better)
Translates to: AGLDTRVQSRRPPCS*LTFPIAASKRLLPS
Trigger: AGATGGGAGCAGACGCTTGCTGGCGGCAATAGGGAAAGTGAGGCAGCTGCAAGGAGGGCGGCGGGACTGCACTCGAGTGTCCAGACCTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327979.8
CDS GCA 90 bp CATCGAGCAGGTCTGGACACTCGAGTGCAGTCCCGCCGCCCTCCTTaGAGCTGCCTCACTTTCCCTATTGCCGCCAGCAAGCGTCTGCTC +
Preference number: 5 (lower is better)
Translates to: HRAGLDTRVQSRRPP*SCLTFPIAASKRLL
Trigger: GAGCAGACGCTTGCTGGCGGCAATAGGGAAAGTGAGGCAGCTGCAAGGAGGGCGGCGGGACTGCACTCGAGTGTCCAGACCTGCTCGATG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327979.8
CDS CCA 90 bp CCAGACACTGGGGACTGTCCTGGGCCTCCGTCCCCAAGGTGTGGCTaGAGGAAGCAGAGTCTACTCCCGCTAAGTCTGTCCGCTCACTGC +
Preference number: 5 (lower is better)
Translates to: PDTGDCPGPPSPRCG*RKQSLLPLSLSAHC
Trigger: GCAGTGAGCGGACAGACTTAGCGGGAGTAGACTCTGCTTCCTCCAGCCACACCTTGGGGACGGAGGCCCAGGACAGTCCCCAGTGTCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000462493.1
CDS CCA 90 bp GGGACTCCCGGACTCGAGCTAGGGCTCTGCAAATTCCATCCACACTaGCCACCAGCCGCTGGTCCCGCTCTCTGGGAAGATCGCCTTGAG +
Preference number: 5 (lower is better)
Translates to: GTPGLELGLCKFHPH*PPAAGPALWEDRLE
Trigger: CTCAAGGCGATCTTCCCAGAGAGCGGGACCAGCGGCTGGTGGCCAGTGTGGATGGAATTTGCAGAGCCCTAGCTCGAGTCCGGGAGTCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327979.8
CDS-3UTR CAA 90 bp CAGTGCCTCTTGACGCAGAAGTGCCGAGCAGCTGACCGGCAGCGAGGCCTGGAGTTCCTCCTGGTGTCTTaGTGGCGTCCAGACAGGTGG +
Preference number: 5 (lower is better)
Translates to: QCLLTQKCRAADRQRGLEFLLVS*WRPDRW
Trigger: CCACCTGTCTGGACGCCACAAAGACACCAGGAGGAA...CTCCAGGCCTCGCTGCCGGTCAGCTGCTCGGCACTTCTGCGTCAAGAGGCACTG
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR CAA 90 bp CTGCATCCCCAGTGCCTCTTGACGCAGAAGTGCCGAGCAGCTGACCGGCAGCGACTCGGGGGTGTCCAGTaGTACAAGGAGCCCTTCCTG +
Preference number: 5 (lower is better)
Translates to: LHPQCLLTQKCRAADRQRLGGVQ*YKEPFL
Trigger: CAGGAAGGGCTCCTTGTACAACTGGACACCCCCGAG...TCGCTGCCGGTCAGCTGCTCGGCACTTCTGCGTCAAGAGGCACTGGGGATGCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR CAA 90 bp GCCGCCGTCTGTGAGCTCCACCAGCACTCGCAGCAAGTCAGTCGGGCTGAGAGTGCCTCACTTTCCCTATaGCCGCCAGCAAGCGTCTGC +
Preference number: 5 (lower is better)
Translates to: AAVCELHQHSQQVSRAESASLSL*PPASVC
Trigger: GCAGACGCTTGCTGGCGGCAATAGGGAAAGTGAGGC...ACTCTCAGCCCGACTGACTTGCTGCGAGTGCTGGTGGAGCTCACAGACGGCGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327979.8
CDS TCA 90 bp GGGGATGAAGGCCTTCTCCTCTTCGTCCCAGGTCTGGCTGTCATCTaGCTCGATCCGACCCTTGAGCTTCCAACGCTGGCGGCCCAGACG +
Preference number: 5 (lower is better)
Translates to: GDEGLLLFVPGLAVI*LDPTLELPTLAAQT
Trigger: CGTCTGGGCCGCCAGCGTTGGAAGCTCAAGGGTCGGATCGAGTCAGATGACAGCCAGACCTGGGACGAAGAGGAGAAGGCCTTCATCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000045083.6
ENST00000327979.8
ENST00000462493.1
CDS TCA 90 bp TCTCGGGGGTCCTCAGAGCTGAAGGAGTCCATCTCAGGCAGCTCCTaGCTCTGGCTTCTTAGGCTGGGACCCCGGAGGTCGCTGTCAGAC +
Preference number: 5 (lower is better)
Translates to: SRGSSELKESISGSS*LWLLRLGPRRSLSD
Trigger: GTCTGACAGCGACCTCCGGGGTCCCAGCCTAAGAAGCCAGAGTCAGGAGCTGCCTGAGATGGACTCCTTCAGCTCTGAGGACCCCCGAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000045083.6
ENST00000327979.8
ENST00000462493.1
CDS TCA 90 bp TGGACGCCGACGTGCTGGTCTCCGTGTCTCGGGGGTCCTCAGAGCTaGAGGAGTCCATCTCAGGCAGCTCCTGACTCTGGCTTCTTAGGC +
Preference number: 5 (lower is better)
Translates to: WTPTCWSPCLGGPQS*RSPSQAAPDSGFLG
Trigger: GCCTAAGAAGCCAGAGTCAGGAGCTGCCTGAGATGGACTCCTTCAGCTCTGAGGACCCCCGAGACACGGAGACCAGCACGTCGGCGTCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000045083.6
ENST00000327979.8
ENST00000462493.1
CDS TCA 90 bp GGGAGCCCCCAAACAGGGACAGCTCATCCAGGGCGAAGTCGGCATTaGGGAAGGCGAAGCTCTCCAGGATGCACTCCATCAGGCTCTCGG +
Preference number: 5 (lower is better)
Translates to: GSPQTGTAHPGRSRH*GRRSSPGCTPSGSR
Trigger: CCGAGAGCCTGATGGAGTGCATCCTGGAGAGCTTCGCCTTCCTCAATGCCGACTTCGCCCTGGATGAGCTGTCCCTGTTTGGGGGCTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000045083.6
ENST00000327979.8
ENST00000462493.1
CDS TCA 90 bp CGTTGGTGTAGAACAGCAAAGCCTTTTCCCGGAAGCTTCTGTTCCTaGCTGCACCAGCCAGGCGAGCGCTGGCCGCCCTGCACACCCTCG +
Preference number: 5 (lower is better)
Translates to: RWCRTAKPFPGSFCS*LHQPGERWPPCTPS
Trigger: CGAGGGTGTGCAGGGCGGCCAGCGCTCGCCTGGCTGGTGCAGTCAGGAACAGAAGCTTCCGGGAAAAGGCTTTGCTGTTCTACACCAACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000045083.6
ENST00000327979.8
ENST00000488529.5
CDS GCA 90 bp GGTGTAGAACAGCAAAGCCTTTTCCCGGAAGCTTCTGTTCCTGACTaGACCAGCCAGGCGAGCGCTGGCCGCCCTGCACACCCTCGGAGT +
Preference number: 5 (lower is better)
Translates to: GVEQQSLFPEASVPD*TSQASAGRPAHPRS
Trigger: ACTCCGAGGGTGTGCAGGGCGGCCAGCGCTCGCCTGGCTGGTGCAGTCAGGAACAGAAGCTTCCGGGAAAAGGCTTTGCTGTTCTACACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000045083.6
ENST00000327979.8
ENST00000488529.5
CDS-3UTR CAA 90 bp GCCGCCGTCTGTGAGCTCCACCAGCACTCGCAGCAAGTCAGTCGGGCTGAGAGTACCTCCAGCTGCAGCTaGATGGTACCCAACTCCGTG +
Preference number: 5 (lower is better)
Translates to: AAVCELHQHSQQVSRAESTSSCS*MVPNSV
Trigger: CACGGAGTTGGGTACCATCAAGCTGCAGCTGGAGGT...ACTCTCAGCCCGACTGACTTGCTGCGAGTGCTGGTGGAGCTCACAGACGGCGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS TCA 90 bp CGCTTCCCCTGCAGCTTCCGGACCACCTTGGCCTGTCCCGCACAGTaGAGCTCCTCGATGAGTGTCACTTCCTTGGTGAGCTGGGTGAAG +
Preference number: 5 (lower is better)
Translates to: RFPCSFRTTLACPAQ*SSSMSVTSLVSWVK
Trigger: CTTCACCCAGCTCACCAAGGAAGTGACACTCATCGAGGAGCTTCACTGTGCGGGACAGGCCAAGGTGGTCCGGAAGCTGCAGGGGAAGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000045083.6
ENST00000327979.8
ENST00000488529.5
CDS GCA 90 bp GCTGCTGTAGGACAGACAGGTAGTATCTCTCCCGGAAGCTGGGGGTaGTCGGGGGTGTCCAGTTGTACAAGGAGCCCTTCCTGCTGCCCA +
Preference number: 5 (lower is better)
Translates to: AAVGQTGSISPGSWG*SGVSSCTRSPSCCP
Trigger: TGGGCAGCAGGAAGGGCTCCTTGTACAACTGGACACCCCCGAGCACCCCCAGCTTCCGGGAGAGATACTACCTGTCTGTCCTACAGCAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000045083.6
ENST00000327979.8
ENST00000462493.1
CDS CCA 90 bp GGACAGCCTCTTCTACTCCGTGTCCCTCGCTGCCTCTCTCTGGCCTaGCACTTAGAACTGATGCCGTTCAGACCCGGCTGGTGTGTGCAG +
Preference number: 5 (lower is better)
Translates to: GQPLLLRVPRCLSLA*HLELMPFRPGWCVQ
Trigger: CTGCACACACCAGCCGGGTCTGAACGGCATCAGTTCTAAGTGCCAGGCCAGAGAGAGGCAGCGAGGGACACGGAGTAGAAGAGGCTGTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000462493.1
CDS CCA 90 bp CTGCCTCACTTTCCCTATTGCCGCCAGCAAGCGTCTGCTCCCATCTaGCCCGGGACTCCCGGACTCGAGCTAGGGCTCTGCAAATTCCAT +
Preference number: 5 (lower is better)
Translates to: LPHFPYCRQQASAPI*PGTPGLELGLCKFH
Trigger: ATGGAATTTGCAGAGCCCTAGCTCGAGTCCGGGAGTCCCGGGCCAGATGGGAGCAGACGCTTGCTGGCGGCAATAGGGAAAGTGAGGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327979.8
CDS-3UTR CAA 90 bp AAAAGACCAGCCCATGCCCTGGGGCTGGGTCAATGGCCGGAGTCTCAGGTAGAGCTGCCCATAGAAAACTaGCCCGTGGGGCTGGGTGAC +
Preference number: 5 (lower is better)
Translates to: KRPAHALGLGQWPESQVELPIEN*PVGLGD
Trigger: GTCACCCAGCCCCACGGGCAAGTTTTCTATGGGCAG...CTCTACCTGAGACTCCGGCCATTGACCCAGCCCCAGGGCATGGGCTGGTCTTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR CAA 90 bp TTAGGGCCTCAACTTGCCTGGCCTTGGCCCTTTTGTAGGTGGCCACCTAGTTTGCCTCTCTGTCCCCGGTaGCCCCTTCCTCGTGGCCGT +
Preference number: 5 (lower is better)
Translates to: LGPQLAWPWPFCRWPPSLPLCPR*PLPRGR
Trigger: ACGGCCACGAGGAAGGGGCAACCGGGGACAGAGAGG...CAAACTAGGTGGCCACCTACAAAAGGGCCAAGGCCAGGCAAGTTGAGGCCCTAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR CAA 90 bp CAGTGCCTCTTGACGCAGAAGTGCCGAGCAGCTGACCGGCAGCGAGGCCTGGAGCAGAGCTTTGCAGACTaGGAGGTGTACCATCAGCAG +
Preference number: 5 (lower is better)
Translates to: QCLLTQKCRAADRQRGLEQSFAD*EVYHQQ
Trigger: CTGCTGATGGTACACCTCCAAGTCTGCAAAGCTCTG...CTCCAGGCCTCGCTGCCGGTCAGCTGCTCGGCACTTCTGCGTCAAGAGGCACTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR CAA 90 bp CCTCTGTACAAAAGACCAGCCCATGCCCTGGGGCTGGGTCAATGGCCGGAGTCTCATCCCCAGTGCCTCTaGACGCAGAAGTGCCGAGCA +
Preference number: 5 (lower is better)
Translates to: PLYKRPAHALGLGQWPESHPQCL*TQKCRA
Trigger: TGCTCGGCACTTCTGCGTCAAGAGGCACTGGGGATG...AGACTCCGGCCATTGACCCAGCCCCAGGGCATGGGCTGGTCTTTTGTACAGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR CAA 90 bp CTCAACTTGCCTGGCCTTGGCCCTTTTGTAGGTGGCCACCTAGTTTGGCTCAGCTCTGGGAAGATCGCCTaGAGGACCTGCTGCGCCCCG +
Preference number: 5 (lower is better)
Translates to: LNLPGLGPFVGGHLVWLSSGKIA*RTCCAP
Trigger: CGGGGCGCAGCAGGTCCTCAAGGCGATCTTCCCAGA...GCTGAGCCAAACTAGGTGGCCACCTACAAAAGGGCCAAGGCCAGGCAAGTTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327979.8
CDS GCA 90 bp CACGTGAGCAACTTTGGCTCTAAGCATCTTACCAGGGCCACCACCTaGAGTCCCCACAACAACCTGGGAGGGGCTGCTGTCACCAGCCTC +
Preference number: 5 (lower is better)
Translates to: HVSNFGSKHLTRATT*SPHNNLGGAAVTSL
Trigger: GAGGCTGGTGACAGCAGCCCCTCCCAGGTTGTTGTGGGGACTGCAGGTGGTGGCCCTGGTAAGATGCTTAGAGCCAAAGTTGCTCACGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482129.1
CDS-3UTR CAA 90 bp GCCGCCGTCTGTGAGCTCCACCAGCACTCGCAGCAAGTCAGTCGGGCTGAGAGTCTCACGGAGTTCCTGTaGATGGACTTTGCGATCCTC +
Preference number: 5 (lower is better)
Translates to: AAVCELHQHSQQVSRAESLTEFL*MDFAIL
Trigger: GAGGATCGCAAAGTCCATCAACAGGAACTCCGTGAG...ACTCTCAGCCCGACTGACTTGCTGCGAGTGCTGGTGGAGCTCACAGACGGCGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR CAA 90 bp CAGTGCCTCTTGACGCAGAAGTGCCGAGCAGCTGACCGGCAGCGAGGCCTGGAGAGCGTGCCGTACATCTaGGAGGATTTTGCAGGCATT +
Preference number: 5 (lower is better)
Translates to: QCLLTQKCRAADRQRGLESVPYI*EDFAGI
Trigger: AATGCCTGCAAAATCCTCCAAGATGTACGGCACGCT...CTCCAGGCCTCGCTGCCGGTCAGCTGCTCGGCACTTCTGCGTCAAGAGGCACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR CAA 90 bp TCTGCCTCTGTACAAAAGACCAGCCCATGCCCTGGGGCTGGGTCAATGGCCGGATTCCTCCTGGTGTCTTaGTGGCGTCCAGACAGGTGG +
Preference number: 5 (lower is better)
Translates to: SASVQKTSPCPGAGSMAGFLLVS*WRPDRW
Trigger: CCACCTGTCTGGACGCCACAAAGACACCAGGAGGAA...TCCGGCCATTGACCCAGCCCCAGGGCATGGGCTGGTCTTTTGTACAGAGGCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR CAA 90 bp GTGCACAGCACCATTACCCAGAGTGCAGGCTATGTCCAGGCTGGGCAGCAGCAACTCGGGGGTGTCCAGTaGTACAAGGAGCCCTTCCTG +
Preference number: 5 (lower is better)
Translates to: VHSTITQSAGYVQAGQQQLGGVQ*YKEPFL
Trigger: CAGGAAGGGCTCCTTGTACAACTGGACACCCCCGAG...TTGCTGCTGCCCAGCCTGGACATAGCCTGCACTCTGGGTAATGGTGCTGTGCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR CAA 90 bp GCCGCCGTCTGTGAGCTCCACCAGCACTCGCAGCAAGTCAGTCGGGCTGAGAGTCTCCAGAACGTGCTTTaGCTGTGCCACTTCTTCCAG +
Preference number: 5 (lower is better)
Translates to: AAVCELHQHSQQVSRAESLQNVL*LCHFFQ
Trigger: CTGGAAGAAGTGGCACAGCAAAAGCACGTTCTGGAG...ACTCTCAGCCCGACTGACTTGCTGCGAGTGCTGGTGGAGCTCACAGACGGCGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR CAA 90 bp GTGCACAGCACCATTACCCAGAGTGCAGGCTATGTCCAGGCTGGGCAGCAGCAAATGCCCTTGAGGTGTTaGAGCGCTAGGCATGCGGCC +
Preference number: 5 (lower is better)
Translates to: VHSTITQSAGYVQAGQQQMPLRC*SARHAA
Trigger: GGCCGCATGCCTAGCGCTCAAACACCTCAAGGGCAT...TTGCTGCTGCCCAGCCTGGACATAGCCTGCACTCTGGGTAATGGTGCTGTGCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS TCA 90 bp GGAGCCCTTCCTGCTGCCCATAGAAAACTTGCCCGTGGGGCTGGGTaGCACCAGGAAGCTCTCAGTATCAAACGGGTTCCACTGCACCTC +
Preference number: 5 (lower is better)
Translates to: GALPAAHRKLARGAG*HQEALSIKRVPLHL
Trigger: GAGGTGCAGTGGAACCCGTTTGATACTGAGAGCTTCCTGGTGTCACCCAGCCCCACGGGCAAGTTTTCTATGGGCAGCAGGAAGGGCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000045083.6
ENST00000327979.8
ENST00000462493.1
CDS TCA 90 bp GAGGTCCCACGGGGCAGAGGCACAGCTGGGATCACAGCTACTGTTTaGCGGCACATTCTGCACCTTGAATGTGGCCTGGGGTTACCTCAC +
Preference number: 5 (lower is better)
Translates to: EVPRGRGTAGITATV*RHILHLECGLGLPH
Trigger: GTGAGGTAACCCCAGGCCACATTCAAGGTGCAGAATGTGCCGTCAAACAGTAGCTGTGATCCCAGCTGTGCCTCTGCCCCGTGGGACCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482129.1
CDS GCA 90 bp TGCAGCTTGATGGTACCCAACTCCGTGATGTCCACCACGATGACCTaGGGCCGCGTCGTGAAGAAGTCGGCGATGTCACACGTCACTGCA +
Preference number: 5 (lower is better)
Translates to: CSLMVPNSVMSTTMT*GRVVKKSAMSHVTA
Trigger: TGCAGTGACGTGTGACATCGCCGACTTCTTCACGACGCGGCCGCAGGTCATCGTGGTGGACATCACGGAGTTGGGTACCATCAAGCTGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000045083.6
ENST00000327979.8
ENST00000462493.1
CDS CCA 90 bp TCCTTGAGGCCTCTTTTCAATGCTTCGAAGATCTTCTTCACCTGCTaGGGCTTCGGGTCTGCACAGACCGACCCCTTCCGCAGCGTGCCG +
Preference number: 5 (lower is better)
Translates to: SLRPLFNASKIFFTC*GFGSAQTDPFRSVP
Trigger: CGGCACGCTGCGGAAGGGGTCGGTCTGTGCAGACCCGAAGCCCCAGCAGGTGAAGAAGATCTTCGAAGCATTGAAAAGAGGCCTCAAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000045083.6
ENST00000327979.8
ENST00000462493.1
CDS CCA 90 bp GCCAGCCTGGAATTCCTCCTGGTGTCTTTGTGGCGTCCAGACAGGTaGTCCAGCTCAGCCTGCTGCACACACAGATACTCCTTGAGGCCT +
Preference number: 5 (lower is better)
Translates to: ASLEFLLVSLWRPDR*SSSACCTHRYSLRP
Trigger: AGGCCTCAAGGAGTATCTGTGTGTGCAGCAGGCTGAGCTGGACCACCTGTCTGGACGCCACAAAGACACCAGGAGGAATTCCAGGCTGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000045083.6
ENST00000327979.8
ENST00000462493.1
CDS CCA 90 bp TCATGCAGCGTGGGGATGAAGGCCTTCTCCTCTTCGTCCCAGGTCTaGCTGTCATCTGACTCGATCCGACCCTTGAGCTTCCAACGCTGG +
Preference number: 5 (lower is better)
Translates to: SCSVGMKAFSSSSQV*LSSDSIRPLSFQRW
Trigger: CCAGCGTTGGAAGCTCAAGGGTCGGATCGAGTCAGATGACAGCCAGACCTGGGACGAAGAGGAGAAGGCCTTCATCCCCACGCTGCATGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000045083.6
ENST00000327979.8
ENST00000462493.1
CDS CCA 90 bp CTAAGCATCTTACCAGGGCCACCACCTGCAGTCCCCACAACAACCTaGGAGGGGCTGCTGTCACCAGCCTCTCCTTACAGACAAGGAACC +
Preference number: 5 (lower is better)
Translates to: LSILPGPPPAVPTTT*EGLLSPASPYRQGT
Trigger: GGTTCCTTGTCTGTAAGGAGAGGCTGGTGACAGCAGCCCCTCCCAGGTTGTTGTGGGGACTGCAGGTGGTGGCCCTGGTAAGATGCTTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482129.1
CDS-3UTR CAA 90 bp TCTGCCTCTGTACAAAAGACCAGCCCATGCCCTGGGGCTGGGTCAATGGCCGGACGCAACTCCGTCACCTaGATGTCCAGGTTCTCATGC +
Preference number: 5 (lower is better)
Translates to: SASVQKTSPCPGAGSMAGRNSVT*MSRFSC
Trigger: GCATGAGAACCTGGACATCAAGGTGACGGAGTTGCG...TCCGGCCATTGACCCAGCCCCAGGGCATGGGCTGGTCTTTTGTACAGAGGCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR CAA 90 bp CAGTGCCTCTTGACGCAGAAGTGCCGAGCAGCTGACCGGCAGCGAGGCCTGGAGTCTCTTCAATGGATGTaGCCTTGCCGACCTTCTCAA +
Preference number: 5 (lower is better)
Translates to: QCLLTQKCRAADRQRGLESLQWM*PCRPSQ
Trigger: TTGAGAAGGTCGGCAAGGCAACATCCATTGAAGAGA...CTCCAGGCCTCGCTGCCGGTCAGCTGCTCGGCACTTCTGCGTCAAGAGGCACTG
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS TCA 90 bp GGGACGGTGTGGCTTGATGCGAGGTCCCTTCCCTGCATTCCCATGTaGCACGTGAGCAACTTTGGCTCTAAGCATCTTACCAGGGCCACC +
Preference number: 5 (lower is better)
Translates to: GTVWLDARSLPCIPM*HVSNFGSKHLTRAT
Trigger: GGTGGCCCTGGTAAGATGCTTAGAGCCAAAGTTGCTCACGTGTCACATGGGAATGCAGGGAAGGGACCTCGCATCAAGCCACACCGTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482129.1
CDS GCA 90 bp CGGCACGCTATTTCCAGCTGTCCTGGGTACTTCCCTCTGACTCTGTaGTGGAAGGTTTTCTTGAGCTGGTTCAGCAGCGTCGTGGCAGGG +
Preference number: 5 (lower is better)
Translates to: RHAISSCPGYFPLTL*WKVFLSWFSSVVAG
Trigger: CCCTGCCACGACGCTGCTGAACCAGCTCAAGAAAACCTTCCAGCACAGAGTCAGAGGGAAGTACCCAGGACAGCTGGAAATAGCGTGCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000045083.6
ENST00000327979.8
ENST00000482129.1
ENST00000488529.5
CDS-3UTR CAA 90 bp AAAAGACCAGCCCATGCCCTGGGGCTGGGTCAATGGCCGGAGTCTCAGGTAGAGCTCACGGAGTTCCTGTaGATGGACTTTGCGATCCTC +
Preference number: 5 (lower is better)
Translates to: KRPAHALGLGQWPESQVELTEFL*MDFAIL
Trigger: GAGGATCGCAAAGTCCATCAACAGGAACTCCGTGAG...CTCTACCTGAGACTCCGGCCATTGACCCAGCCCCAGGGCATGGGCTGGTCTTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR CAA 90 bp CCGGCAGCGAGGCCTGGAGTTCTACACACTTGCCTTGGAGCCTTTTATTTAGGGCTGCCCATAGAAAACTaGCCCGTGGGGCTGGGTGAC +
Preference number: 5 (lower is better)
Translates to: PAARPGVLHTCLGAFYLGLPIEN*PVGLGD
Trigger: GTCACCCAGCCCCACGGGCAAGTTTTCTATGGGCAG...CCCTAAATAAAAGGCTCCAAGGCAAGTGTGTAGAACTCCAGGCCTCGCTGCCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR CAA 90 bp CCGGCAGCGAGGCCTGGAGTTCTACACACTTGCCTTGGAGCCTTTTATTTAGGGAGGGCGAAGTCGGCATaGAGGAAGGCGAAGCTCTCC +
Preference number: 5 (lower is better)
Translates to: PAARPGVLHTCLGAFYLGRAKSA*RKAKLS
Trigger: GGAGAGCTTCGCCTTCCTCAATGCCGACTTCGCCCT...CCCTAAATAAAAGGCTCCAAGGCAAGTGTGTAGAACTCCAGGCCTCGCTGCCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR CAA 90 bp GGCTCCTGGGCTGATGTGGTGGCTTCTTCCCTTTGTGCTGCTGAACATAGGGAAAGGGCGAAGTCGGCATaGAGGAAGGCGAAGCTCTCC +
Preference number: 5 (lower is better)
Translates to: GSWADVVASSLCAAEHRERAKSA*RKAKLS
Trigger: GGAGAGCTTCGCCTTCCTCAATGCCGACTTCGCCCT...TTCCCTATGTTCAGCAGCACAAAGGGAAGAAGCCACCACATCAGCCCAGGAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR CAA 90 bp TCTGCCTCTGTACAAAAGACCAGCCCATGCCCTGGGGCTGGGTCAATGGCCGGACTCCAGAACGTGCTTTaGCTGTGCCACTTCTTCCAG +
Preference number: 5 (lower is better)
Translates to: SASVQKTSPCPGAGSMAGLQNVL*LCHFFQ
Trigger: CTGGAAGAAGTGGCACAGCAAAAGCACGTTCTGGAG...TCCGGCCATTGACCCAGCCCCAGGGCATGGGCTGGTCTTTTGTACAGAGGCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR CAA 90 bp AAAAGACCAGCCCATGCCCTGGGGCTGGGTCAATGGCCGGAGTCTCAGGTAGAGATGAGTGTCACTTCCTaGGTGAGCTGGGTGAAGTGC +
Preference number: 5 (lower is better)
Translates to: KRPAHALGLGQWPESQVEMSVTS*VSWVKC
Trigger: GCACTTCACCCAGCTCACCAAGGAAGTGACACTCAT...CTCTACCTGAGACTCCGGCCATTGACCCAGCCCCAGGGCATGGGCTGGTCTTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR CAA 90 bp GGCTCCTGGGCTGATGTGGTGGCTTCTTCCCTTTGTGCTGCTGAACATAGGGAAATGCCCTTGAGGTGTTaGAGCGCTAGGCATGCGGCC +
Preference number: 5 (lower is better)
Translates to: GSWADVVASSLCAAEHREMPLRC*SARHAA
Trigger: GGCCGCATGCCTAGCGCTCAAACACCTCAAGGGCAT...TTCCCTATGTTCAGCAGCACAAAGGGAAGAAGCCACCACATCAGCCCAGGAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR CAA 90 bp GGCTCCTGGGCTGATGTGGTGGCTTCTTCCCTTTGTGCTGCTGAACATAGGGAAACCCTCAGCCAGAAGTaGAGCGCTCTGTTGAGGCCG +
Preference number: 5 (lower is better)
Translates to: GSWADVVASSLCAAEHRETLSQK*SALLRP
Trigger: CGGCCTCAACAGAGCGCTCAACTTCTGGCTGAGGGT...TTCCCTATGTTCAGCAGCACAAAGGGAAGAAGCCACCACATCAGCCCAGGAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR CAA 90 bp CCGGCAGCGAGGCCTGGAGTTCTACACACTTGCCTTGGAGCCTTTTATTTAGGGACCCTCAGCCAGAAGTaGAGCGCTCTGTTGAGGCCG +
Preference number: 5 (lower is better)
Translates to: PAARPGVLHTCLGAFYLGTLSQK*SALLRP
Trigger: CGGCCTCAACAGAGCGCTCAACTTCTGGCTGAGGGT...CCCTAAATAAAAGGCTCCAAGGCAAGTGTGTAGAACTCCAGGCCTCGCTGCCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS TCA 90 bp CACAGCTGGGATCACAGCTACTGTTTGACGGCACATTCTGCACCTTaGATGTGGCCTGGGGTTACCTCACTGAACCCCGTGCAGTGCCCT +
Preference number: 5 (lower is better)
Translates to: HSWDHSYCLTAHSAP*MWPGVTSLNPVQCP
Trigger: AGGGCACTGCACGGGGTTCAGTGAGGTAACCCCAGGCCACATTCAAGGTGCAGAATGTGCCGTCAAACAGTAGCTGTGATCCCAGCTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482129.1
CDS TCA 90 bp GTCCGCGAGGCCTGTGGGATGACTGAAAGCCCCAGTTCAGAAACCTaGATGGTGACTCGGGGAGAGCACATGACAAGGACCCGAAAGGTT +
Preference number: 5 (lower is better)
Translates to: VREACGMTESPSSET*MVTRGEHMTRTRKV
Trigger: AACCTTTCGGGTCCTTGTCATGTGCTCTCCCCGAGTCACCATTCAGGTTTCTGAACTGGGGCTTTCAGTCATCCCACAGGCCTCGCGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000482129.1
ENST00000488529.5
CDS GCA 90 bp TTTCAATGCTTCGAAGATCTTCTTCACCTGCTGGGGCTTCGGGTCTaGACAGACCGACCCCTTCCGCAGCGTGCCGTACATCTTGGAGGA +
Preference number: 5 (lower is better)
Translates to: FQCFEDLLHLLGLRV*TDRPLPQRAVHLGG
Trigger: TCCTCCAAGATGTACGGCACGCTGCGGAAGGGGTCGGTCTGTGCAGACCCGAAGCCCCAGCAGGTGAAGAAGATCTTCGAAGCATTGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000045083.6
ENST00000327979.8
ENST00000462493.1
CDS GCA 90 bp GCAGAGGCACAGCTGGGATCACAGCTACTGTTTGACGGCACATTCTaGACCTTGAATGTGGCCTGGGGTTACCTCACTGAACCCCGTGCA +
Preference number: 5 (lower is better)
Translates to: AEAQLGSQLLFDGTF*TLNVAWGYLTEPRA
Trigger: TGCACGGGGTTCAGTGAGGTAACCCCAGGCCACATTCAAGGTGCAGAATGTGCCGTCAAACAGTAGCTGTGATCCCAGCTGTGCCTCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482129.1
CDS CCA 90 bp CACGCTATTTCCAGCTGTCCTGGGTACTTCCCTCTGACTCTGTGCTaGAAGGTTTTCTTGAGCTGGTTCAGCAGCGTCGTGGCAGGGCAG +
Preference number: 5 (lower is better)
Translates to: HAISSCPGYFPLTLC*KVFLSWFSSVVAGQ
Trigger: CTGCCCTGCCACGACGCTGCTGAACCAGCTCAAGAAAACCTTCCAGCACAGAGTCAGAGGGAAGTACCCAGGACAGCTGGAAATAGCGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000045083.6
ENST00000327979.8
ENST00000482129.1
ENST00000488529.5
CDS-3UTR CAA 90 bp GCCGCCGTCTGTGAGCTCCACCAGCACTCGCAGCAAGTCAGTCGGGCTGAGAGTACACACAGATACTCCTaGAGGCCTCTTTTCAATGCT +
Preference number: 5 (lower is better)
Translates to: AAVCELHQHSQQVSRAESTHRYS*RPLFNA
Trigger: AGCATTGAAAAGAGGCCTCAAGGAGTATCTGTGTGT...ACTCTCAGCCCGACTGACTTGCTGCGAGTGCTGGTGGAGCTCACAGACGGCGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR CAA 90 bp GCGAGGCCTGGAGTTCTACACACTTGCCTTGGAGCCTTTTATTTAGGGCCTCAAGACTCGATCCGACCCTaGAGCTTCCAACGCTGGCGG +
Preference number: 5 (lower is better)
Translates to: ARPGVLHTCLGAFYLGPQDSIRP*SFQRWR
Trigger: CCGCCAGCGTTGGAAGCTCAAGGGTCGGATCGAGTC...TTGAGGCCCTAAATAAAAGGCTCCAAGGCAAGTGTGTAGAACTCCAGGCCTCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR CAA 90 bp TGGGCAGCTCACACTCCTGGAGGAGTGCACAGCACCATTACCCAGAGTGCAGGCATGCTTTCAATGCCCTaGAGGTGTTTGAGCGCTAGG +
Preference number: 5 (lower is better)
Translates to: WAAHTPGGVHSTITQSAGMLSMP*RCLSAR
Trigger: CCTAGCGCTCAAACACCTCAAGGGCATTGAAAGCAT...GCCTGCACTCTGGGTAATGGTGCTGTGCACTCCTCCAGGAGTGTGAGCTGCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR CAA 90 bp CCTCTGTACAAAAGACCAGCCCATGCCCTGGGGCTGGGTCAATGGCCGGAGTCTATGCTTTCAATGCCCTaGAGGTGTTTGAGCGCTAGG +
Preference number: 5 (lower is better)
Translates to: PLYKRPAHALGLGQWPESMLSMP*RCLSAR
Trigger: CCTAGCGCTCAAACACCTCAAGGGCATTGAAAGCAT...AGACTCCGGCCATTGACCCAGCCCCAGGGCATGGGCTGGTCTTTTGTACAGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR CAA 90 bp CCGGCAGCGAGGCCTGGAGTTCTACACACTTGCCTTGGAGCCTTTTATTTAGGGAGGTGGCCACCTAGTTaGGCTCAGCTCTGCATCTCG +
Preference number: 5 (lower is better)
Translates to: PAARPGVLHTCLGAFYLGRWPPS*AQLCIS
Trigger: CGAGATGCAGAGCTGAGCCAAACTAGGTGGCCACCT...CCCTAAATAAAAGGCTCCAAGGCAAGTGTGTAGAACTCCAGGCCTCGCTGCCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR CAA 90 bp AAAAGACCAGCCCATGCCCTGGGGCTGGGTCAATGGCCGGAGTCTCAGGTAGAGGCTTCCGAAGCTGGGTaGATTGATTGCATTTGGGTG +
Preference number: 5 (lower is better)
Translates to: KRPAHALGLGQWPESQVEASEAG*IDCIWV
Trigger: CACCCAAATGCAATCAATCAACCCAGCTTCGGAAGC...CTCTACCTGAGACTCCGGCCATTGACCCAGCCCCAGGGCATGGGCTGGTCTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS TCA 90 bp TGTGGCTTGATGCGAGGTCCCTTCCCTGCATTCCCATGTGACACGTaGGCAACTTTGGCTCTAAGCATCTTACCAGGGCCACCACCTGCA +
Preference number: 5 (lower is better)
Translates to: CGLMRGPFPAFPCDT*ATLALSILPGPPPA
Trigger: TGCAGGTGGTGGCCCTGGTAAGATGCTTAGAGCCAAAGTTGCTCACGTGTCACATGGGAATGCAGGGAAGGGACCTCGCATCAAGCCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482129.1
CDS GCA 90 bp ACAGACCGACCCCTTCCGCAGCGTGCCGTACATCTTGGAGGATTTTaGAGGCATTCGCGATCTCACGGAGTTCCTGTTGATGGACTTTGC +
Preference number: 5 (lower is better)
Translates to: TDRPLPQRAVHLGGF*RHSRSHGVPVDGLC
Trigger: GCAAAGTCCATCAACAGGAACTCCGTGAGATCGCGAATGCCTGCAAAATCCTCCAAGATGTACGGCACGCTGCGGAAGGGGTCGGTCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000045083.6
ENST00000327979.8
ENST00000462493.1
CDS CCA 90 bp TCACAGCTACTGTTTGACGGCACATTCTGCACCTTGAATGTGGCCTaGGGTTACCTCACTGAACCCCGTGCAGTGCCCTCCTCCTATGCA +
Preference number: 5 (lower is better)
Translates to: SQLLFDGTFCTLNVA*GYLTEPRAVPSSYA
Trigger: TGCATAGGAGGAGGGCACTGCACGGGGTTCAGTGAGGTAACCCCAGGCCACATTCAAGGTGCAGAATGTGCCGTCAAACAGTAGCTGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482129.1
CDS-3UTR CAA 90 bp TCTGCCTCTGTACAAAAGACCAGCCCATGCCCTGGGGCTGGGTCAATGGCCGGAACATCTTGGAGGATTTaGCAGGCATTCGCGATCTCA +
Preference number: 5 (lower is better)
Translates to: SASVQKTSPCPGAGSMAGTSWRI*QAFAIS
Trigger: TGAGATCGCGAATGCCTGCAAAATCCTCCAAGATGT...TCCGGCCATTGACCCAGCCCCAGGGCATGGGCTGGTCTTTTGTACAGAGGCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR CAA 90 bp TGGGCAGCTCACACTCCTGGAGGAGTGCACAGCACCATTACCCAGAGTGCAGGCTTCCACACAGCGCGTTaGCTTGTCCAGGTCATAATA +
Preference number: 5 (lower is better)
Translates to: WAAHTPGGVHSTITQSAGFHTAR*LVQVII
Trigger: TATTATGACCTGGACAAGCAAACGCGCTGTGTGGAA...GCCTGCACTCTGGGTAATGGTGCTGTGCACTCCTCCAGGAGTGTGAGCTGCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR CAA 90 bp CCGGCAGCGAGGCCTGGAGTTCTACACACTTGCCTTGGAGCCTTTTATTTAGGGCGCAACTCCGTCACCTaGATGTCCAGGTTCTCATGC +
Preference number: 5 (lower is better)
Translates to: PAARPGVLHTCLGAFYLGRNSVT*MSRFSC
Trigger: GCATGAGAACCTGGACATCAAGGTGACGGAGTTGCG...CCCTAAATAAAAGGCTCCAAGGCAAGTGTGTAGAACTCCAGGCCTCGCTGCCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR CAA 90 bp AAAAGACCAGCCCATGCCCTGGGGCTGGGTCAATGGCCGGAGTCTCAGGTAGAGTCAATGGATGTTGCCTaGCCGACCTTCTCAAAGTCA +
Preference number: 5 (lower is better)
Translates to: KRPAHALGLGQWPESQVESMDVA*PTFSKS
Trigger: TGACTTTGAGAAGGTCGGCAAGGCAACATCCATTGA...CTCTACCTGAGACTCCGGCCATTGACCCAGCCCCAGGGCATGGGCTGGTCTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR CAA 90 bp GCGAGGCCTGGAGTTCTACACACTTGCCTTGGAGCCTTTTATTTAGGGCCTCAAACATGGTGGTCACCTTaGGTGGCAGACAGGACAGCC +
Preference number: 5 (lower is better)
Translates to: ARPGVLHTCLGAFYLGPQTWWSP*VADRTA
Trigger: GGCTGTCCTGTCTGCCACCAAAGGTGACCACCATGT...TTGAGGCCCTAAATAAAAGGCTCCAAGGCAAGTGTGTAGAACTCCAGGCCTCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000045083.6
CDS-3UTR CAA 90 bp TGGGCAGCTCACACTCCTGGAGGAGTGCACAGCACCATTACCCAGAGTGCAGGCACACACAGATACTCCTaGAGGCCTCTTTTCAATGCT +
Preference number: 5 (lower is better)
Translates to: WAAHTPGGVHSTITQSAGTHRYS*RPLFNA
Trigger: AGCATTGAAAAGAGGCCTCAAGGAGTATCTGTGTGT...GCCTGCACTCTGGGTAATGGTGCTGTGCACTCCTCCAGGAGTGTGAGCTGCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR CAA 90 bp GTGCACAGCACCATTACCCAGAGTGCAGGCTATGTCCAGGCTGGGCAGCAGCAATCAATGGATGTTGCCTaGCCGACCTTCTCAAAGTCA +
Preference number: 5 (lower is better)
Translates to: VHSTITQSAGYVQAGQQQSMDVA*PTFSKS
Trigger: TGACTTTGAGAAGGTCGGCAAGGCAACATCCATTGA...TTGCTGCTGCCCAGCCTGGACATAGCCTGCACTCTGGGTAATGGTGCTGTGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR CAA 90 bp GGCCTTGGCCCTTTTGTAGGTGGCCACCTAGTTTGGCTCAGCTCTGCATCTCGGTCTCTTCAATGGATGTaGCCTTGCCGACCTTCTCAA +
Preference number: 5 (lower is better)
Translates to: GLGPFVGGHLVWLSSASRSLQWM*PCRPSQ
Trigger: TTGAGAAGGTCGGCAAGGCAACATCCATTGAAGAGA...CCGAGATGCAGAGCTGAGCCAAACTAGGTGGCCACCTACAAAAGGGCCAAGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR CAA 90 bp TTAGGGCCTCAACTTGCCTGGCCTTGGCCCTTTTGTAGGTGGCCACCTAGTTTGATGAGTGTCACTTCCTaGGTGAGCTGGGTGAAGTGC +
Preference number: 5 (lower is better)
Translates to: LGPQLAWPWPFCRWPPSLMSVTS*VSWVKC
Trigger: GCACTTCACCCAGCTCACCAAGGAAGTGACACTCAT...CAAACTAGGTGGCCACCTACAAAAGGGCCAAGGCCAGGCAAGTTGAGGCCCTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR CAA 90 bp GGCTCCTGGGCTGATGTGGTGGCTTCTTCCCTTTGTGCTGCTGAACATAGGGAAAGCGTGCCGTACATCTaGGAGGATTTTGCAGGCATT +
Preference number: 5 (lower is better)
Translates to: GSWADVVASSLCAAEHRESVPYI*EDFAGI
Trigger: AATGCCTGCAAAATCCTCCAAGATGTACGGCACGCT...TTCCCTATGTTCAGCAGCACAAAGGGAAGAAGCCACCACATCAGCCCAGGAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR CAA 90 bp TCTGCCTCTGTACAAAAGACCAGCCCATGCCCTGGGGCTGGGTCAATGGCCGGATGGAGTTCTACACACTaGCCTTGGAGCCTTTTATTT +
Preference number: 5 (lower is better)
Translates to: SASVQKTSPCPGAGSMAGWSSTH*PWSLLF
Trigger: AAATAAAAGGCTCCAAGGCAAGTGTGTAGAACTCCA...TCCGGCCATTGACCCAGCCCCAGGGCATGGGCTGGTCTTTTGTACAGAGGCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS GCA 90 bp TTGCCGACCTTCTCAAAGTCAAGGACAGAAAGTGTCTCCAGAACGTaGTTTTGCTGTGCCACTTCTTCCAGGAGGCATTCCTGGACCAGC +
Preference number: 5 (lower is better)
Translates to: LPTFSKSRTESVSRT*FCCATSSRRHSWTS
Trigger: GCTGGTCCAGGAATGCCTCCTGGAAGAAGTGGCACAGCAAAAGCACGTTCTGGAGACACTTTCTGTCCTTGACTTTGAGAAGGTCGGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000045083.6
ENST00000327979.8
ENST00000488529.5
CDS CCA 90 bp TCCAGAACGTGCTTTTGCTGTGCCACTTCTTCCAGGAGGCATTCCTaGACCAGCCTTGATAAATTAGGGGAGGCCAGTTTCTGCAGCAGA +
Preference number: 5 (lower is better)
Translates to: SRTCFCCATSSRRHS*TSLDKLGEASFCSR
Trigger: TCTGCTGCAGAAACTGGCCTCCCCTAATTTATCAAGGCTGGTCCAGGAATGCCTCCTGGAAGAAGTGGCACAGCAAAAGCACGTTCTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000045083.6
ENST00000327979.8
ENST00000488529.5
CDS-3UTR CAA 90 bp GCGAGGCCTGGAGTTCTACACACTTGCCTTGGAGCCTTTTATTTAGGGCCTCAAGCTTCCGAAGCTGGGTaGATTGATTGCATTTGGGTG +
Preference number: 5 (lower is better)
Translates to: ARPGVLHTCLGAFYLGPQASEAG*IDCIWV
Trigger: CACCCAAATGCAATCAATCAACCCAGCTTCGGAAGC...TTGAGGCCCTAAATAAAAGGCTCCAAGGCAAGTGTGTAGAACTCCAGGCCTCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR CAA 90 bp CCTCTGTACAAAAGACCAGCCCATGCCCTGGGGCTGGGTCAATGGCCGGAGTCTCTTTCTTTAAAGCAATaGCGTTCTTCAGTGAACTCT +
Preference number: 5 (lower is better)
Translates to: PLYKRPAHALGLGQWPESLSLKQ*RSSVNS
Trigger: AGAGTTCACTGAAGAACGCAATTGCTTTAAAGAAAG...AGACTCCGGCCATTGACCCAGCCCCAGGGCATGGGCTGGTCTTTTGTACAGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS GCA 90 bp ACCTTCTCAAAGTCAAGGACAGAAAGTGTCTCCAGAACGTGCTTTTaGTGTGCCACTTCTTCCAGGAGGCATTCCTGGACCAGCCTTGAT +
Preference number: 5 (lower is better)
Translates to: TFSKSRTESVSRTCF*CATSSRRHSWTSLD
Trigger: ATCAAGGCTGGTCCAGGAATGCCTCCTGGAAGAAGTGGCACAGCAAAAGCACGTTCTGGAGACACTTTCTGTCCTTGACTTTGAGAAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000045083.6
ENST00000327979.8
ENST00000488529.5
CDS-3UTR CAA 90 bp TCGATGAGAATGTTCAAGTTAAAGTTCTCCAATGCCATTGCTACAGCAACCTCACATCCCCAGTGCCTCTaGACGCAGAAGTGCCGAGCA +
Preference number: 5 (lower is better)
Translates to: SMRMFKLKFSNAIATATSHPQCL*TQKCRA
Trigger: TGCTCGGCACTTCTGCGTCAAGAGGCACTGGGGATG...TGAGGTTGCTGTAGCAATGGCATTGGAGAACTTTAACTTGAACATTCTCATCGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR CAA 90 bp AAGCAATTGCGTTCTTCAGTGAACTCTTTCTTTAGGCCAGTTGATGGCTTCTTAGACGCGGCCGATTGCTaGTCAGTGTCACTCCCAGCT +
Preference number: 5 (lower is better)
Translates to: KQLRSSVNSFFRPVDGFLDAADC*SVSLPA
Trigger: AGCTGGGAGTGACACTGACAAGCAATCGGCCGCGTC...TAAGAAGCCATCAACTGGCCTAAAGAAAGAGTTCACTGAAGAACGCAATTGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327979.8
CDS-3UTR CAA 90 bp AAGCAATTGCGTTCTTCAGTGAACTCTTTCTTTAGGCCAGTTGATGGCTTCTTAACCTCCAGCTGCAGCTaGATGGTACCCAACTCCGTG +
Preference number: 5 (lower is better)
Translates to: KQLRSSVNSFFRPVDGFLTSSCS*MVPNSV
Trigger: CACGGAGTTGGGTACCATCAAGCTGCAGCTGGAGGT...TAAGAAGCCATCAACTGGCCTAAAGAAAGAGTTCACTGAAGAACGCAATTGCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR CAA 90 bp GCGAGGCCTGGAGTTCTACACACTTGCCTTGGAGCCTTTTATTTAGGGCCTCAATGGAGTTCTACACACTaGCCTTGGAGCCTTTTATTT +
Preference number: 5 (lower is better)
Translates to: ARPGVLHTCLGAFYLGPQWSSTH*PWSLLF
Trigger: AAATAAAAGGCTCCAAGGCAAGTGTGTAGAACTCCA...TTGAGGCCCTAAATAAAAGGCTCCAAGGCAAGTGTGTAGAACTCCAGGCCTCGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR CAA 90 bp TCGATGAGAATGTTCAAGTTAAAGTTCTCCAATGCCATTGCTACAGCAACCTCACAGAGCTTTGCAGACTaGGAGGTGTACCATCAGCAG +
Preference number: 5 (lower is better)
Translates to: SMRMFKLKFSNAIATATSQSFAD*EVYHQQ
Trigger: CTGCTGATGGTACACCTCCAAGTCTGCAAAGCTCTG...TGAGGTTGCTGTAGCAATGGCATTGGAGAACTTTAACTTGAACATTCTCATCGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR CAA 90 bp TCGATGAGAATGTTCAAGTTAAAGTTCTCCAATGCCATTGCTACAGCAACCTCAACATCTTGGAGGATTTaGCAGGCATTCGCGATCTCA +
Preference number: 5 (lower is better)
Translates to: SMRMFKLKFSNAIATATSTSWRI*QAFAIS
Trigger: TGAGATCGCGAATGCCTGCAAAATCCTCCAAGATGT...TGAGGTTGCTGTAGCAATGGCATTGGAGAACTTTAACTTGAACATTCTCATCGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR CAA 90 bp TCGATGAGAATGTTCAAGTTAAAGTTCTCCAATGCCATTGCTACAGCAACCTCATTCCACACAGCGCGTTaGCTTGTCCAGGTCATAATA +
Preference number: 5 (lower is better)
Translates to: SMRMFKLKFSNAIATATSFHTAR*LVQVII
Trigger: TATTATGACCTGGACAAGCAAACGCGCTGTGTGGAA...TGAGGTTGCTGTAGCAATGGCATTGGAGAACTTTAACTTGAACATTCTCATCGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS-3UTR CAA 90 bp TCGATGAGAATGTTCAAGTTAAAGTTCTCCAATGCCATTGCTACAGCAACCTCACTTTCTTTAAAGCAATaGCGTTCTTCAGTGAACTCT +
Preference number: 5 (lower is better)
Translates to: SMRMFKLKFSNAIATATSLSLKQ*RSSVNS
Trigger: AGAGTTCACTGAAGAACGCAATTGCTTTAAAGAAAG...TGAGGTTGCTGTAGCAATGGCATTGGAGAACTTTAACTTGAACATTCTCATCGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS GCA 72 bp CCAGGCGAGCGCTGGCCGCCCTGCACACCCTCGGAGTaGCGTCCAGCTGGAGCAGCGCCCAGGCTCTTAAGG +
Preference number: 6 (lower is better)
Translates to: PGERWPPCTPSE*RPAGAAPRLLR
Trigger: CCTTAAGAGCCTGGGCGCTGCTCCAGCTGGACGGCACTCCGAGGGTGTGCAGGGCGGCCAGCGCTCGCCTGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000045083.6
ENST00000327979.8
ENST00000488529.5
CDS CCA 72 bp CCGTCCAGCTGGAGCAGCGCCCAGGCTCTTAAGGTCTaGGGCAGAGGCTGGAGCTGGCCCAGCCGCTTCCCC +
Preference number: 6 (lower is better)
Translates to: PSSWSSAQALKV*GRGWSWPSRFP
Trigger: GGGGAAGCGGCTGGGCCAGCTCCAGCCTCTGCCCCAGACCTTAAGAGCCTGGGCGCTGCTCCAGCTGGACGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000045083.6
ENST00000327979.8
ENST00000488529.5
CDS CAA 72 bp CGAGGGCCACGCCAGGCCCGTCCTCTCTGTCCCCGGTaGCCCCTTCCTCGTGGCCGTTCTGGCTACTCGAGG +
Preference number: 6 (lower is better)
Translates to: RGPRQARPLCPR*PLPRGRSGYSR
Trigger: CCTCGAGTAGCCAGAACGGCCACGAGGAAGGGGCAACCGGGGACAGAGAGGACGGGCCTGGCGTGGCCCTCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000045083.6
ENST00000327979.8
ENST00000462493.1
CDS GCA 72 bp CTTTGCGATCCTCCGGCTCTGTGCACTGCTGAAGCCTaGGAAGGAGGCGCTCCGGCCCACGACCCCCACGGC +
Preference number: 6 (lower is better)
Translates to: LCDPPALCTAEA*EGGAPAHDPHG
Trigger: GCCGTGGGGGTCGTGGGCCGGAGCGCCTCCTTCGCAGGCTTCAGCAGTGCACAGAGCCGGAGGATCGCAAAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000045083.6
ENST00000327979.8
ENST00000462493.1
CDS GCA 72 bp CTCCATCAGGCTCTCGGCCGAGGTGTGCTCCTGCCGTaGTCTGCAGGGCTTCAGCCGGTCCCGGAAGCCGAG +
Preference number: 6 (lower is better)
Translates to: LHQALGRGVLLP*SAGLQPVPEAE
Trigger: CTCGGCTTCCGGGACCGGCTGAAGCCCTGCAGAGCACGGCAGGAGCACACCTCGGCCGAGAGCCTGATGGAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000045083.6
ENST00000327979.8
ENST00000462493.1
CDS CCA 72 bp GGCCCGTCCTCTCTGTCCCCGGTTGCCCCTTCCTCGTaGCCGTTCTGGCTACTCGAGGCTGTGCCGCTGTGG +
Preference number: 6 (lower is better)
Translates to: GPSSLSPVAPSS*PFWLLEAVPLW
Trigger: CCACAGCGGCACAGCCTCGAGTAGCCAGAACGGCCACGAGGAAGGGGCAACCGGGGACAGAGAGGACGGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000045083.6
ENST00000327979.8
ENST00000462493.1
CDS CCA 72 bp CCGAGGACCTGGTACTCCAGCTCCCGGAGCTGGGGCTaGGTGGAGTCCGTGGGCCTCAGCAACTCCAGGACC +
Preference number: 6 (lower is better)
Translates to: PRTWYSSSRSWG*VESVGLSNSRT
Trigger: GGTCCTGGAGTTGCTGAGGCCCACGGACTCCACCCAGCCCCAGCTCCGGGAGCTGGAGTACCAGGTCCTCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000045083.6
ENST00000327979.8
ENST00000462493.1
CDS CCA 72 bp GCCCAGGCTCTTAAGGTCTGGGGCAGAGGCTGGAGCTaGCCCAGCCGCTTCCCCTGCAGCTTCCGGACCACC +
Preference number: 6 (lower is better)
Translates to: AQALKVWGRGWS*PSRFPCSFRTT
Trigger: GGTGGTCCGGAAGCTGCAGGGGAAGCGGCTGGGCCAGCTCCAGCCTCTGCCCCAGACCTTAAGAGCCTGGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000045083.6
ENST00000327979.8
ENST00000488529.5
CDS CCA 72 bp AGCAGCGCCCAGGCTCTTAAGGTCTGGGGCAGAGGCTaGAGCTGGCCCAGCCGCTTCCCCTGCAGCTTCCGG +
Preference number: 6 (lower is better)
Translates to: SSAQALKVWGRG*SWPSRFPCSFR
Trigger: CCGGAAGCTGCAGGGGAAGCGGCTGGGCCAGCTCCAGCCTCTGCCCCAGACCTTAAGAGCCTGGGCGCTGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000045083.6
ENST00000327979.8
ENST00000488529.5
CDS CCA 72 bp CTGGCCGCCCTGCACACCCTCGGAGTGCCGTCCAGCTaGAGCAGCGCCCAGGCTCTTAAGGTCTGGGGCAGA +
Preference number: 6 (lower is better)
Translates to: LAALHTLGVPSS*SSAQALKVWGR
Trigger: TCTGCCCCAGACCTTAAGAGCCTGGGCGCTGCTCCAGCTGGACGGCACTCCGAGGGTGTGCAGGGCGGCCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000045083.6
ENST00000327979.8
ENST00000488529.5
CDS TCA 72 bp GGAACTCGCCCAGGTGAACCTCCAGGGCCCCCTCGATaGGCCACATGTCCTCGGCGCACTCGTGCAGGCTGC +
Preference number: 6 (lower is better)
Translates to: GTRPGEPPGPPR*ATCPRRTRAGC
Trigger: GCAGCCTGCACGAGTGCGCCGAGGACATGTGGCTCATCGAGGGGGCCCTGGAGGTTCACCTGGGCGAGTTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000045083.6
ENST00000327979.8
ENST00000462493.1
CDS GCA 72 bp CGGGTCACCCGGTGGGAGTGGTGGCCACTGGGTCACTaGTGGAAGGAGGTGCACTCACCGGAGACCCTGGGA +
Preference number: 6 (lower is better)
Translates to: RVTRWEWWPLGH*WKEVHSPETLG
Trigger: TCCCAGGGTCTCCGGTGAGTGCACCTCCTTCCAGCAGTGACCCAGTGGCCACCACTCCCACCGGGTGACCCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462493.1
CDS CCA 72 bp GGACCTGGTACTCCAGCTCCCGGAGCTGGGGCTGGGTaGAGTCCGTGGGCCTCAGCAACTCCAGGACCTCCT +
Preference number: 6 (lower is better)
Translates to: GPGTPAPGAGAG*SPWASATPGPP
Trigger: AGGAGGTCCTGGAGTTGCTGAGGCCCACGGACTCCACCCAGCCCCAGCTCCGGGAGCTGGAGTACCAGGTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000045083.6
ENST00000327979.8
ENST00000462493.1
CDS CCA 72 bp GTCACCCGGTGGGAGTGGTGGCCACTGGGTCACTGCTaGAAGGAGGTGCACTCACCGGAGACCCTGGGAGCC +
Preference number: 6 (lower is better)
Translates to: VTRWEWWPLGHC*KEVHSPETLGA
Trigger: GGCTCCCAGGGTCTCCGGTGAGTGCACCTCCTTCCAGCAGTGACCCAGTGGCCACCACTCCCACCGGGTGAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462493.1
CDS GCA 72 bp ATGCACTCCATCAGGCTCTCGGCCGAGGTGTGCTCCTaGCGTGCTCTGCAGGGCTTCAGCCGGTCCCGGAAG +
Preference number: 6 (lower is better)
Translates to: MHSIRLSAEVCS*RALQGFSRSRK
Trigger: CTTCCGGGACCGGCTGAAGCCCTGCAGAGCACGGCAGGAGCACACCTCGGCCGAGAGCCTGATGGAGTGCAT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000045083.6
ENST00000327979.8
ENST00000462493.1
CDS GCA 72 bp GGGAGTGGTGGCCACTGGGTCACTGCTGGAAGGAGGTaGACTCACCGGAGACCCTGGGAGCCCCCAAACAGG +
Preference number: 6 (lower is better)
Translates to: GSGGHWVTAGRR*THRRPWEPPNR
Trigger: CCTGTTTGGGGGCTCCCAGGGTCTCCGGTGAGTGCACCTCCTTCCAGCAGTGACCCAGTGGCCACCACTCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000462493.1
CDS CCA 72 bp GCCTCCAGAGAGGTGGGCCATCTCTGGCAGGAGACCTaGGGGCAGGGGGTCCTCCCGAGCCTCCTCTTCAAT +
Preference number: 6 (lower is better)
Translates to: ASREVGHLWQET*GQGVLPSLLFN
Trigger: ATTGAAGAGGAGGCTCGGGAGGACCCCCTGCCCCCAGGTCTCCTGCCAGAGATGGCCCACCTCTCTGGAGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000045083.6
ENST00000327979.8
ENST00000462493.1
CDS CCA 72 bp GAGGCTGGCAGGAAACGTGGAGCTCGGGTCACCCGGTaGGAGTGGTGGCCACTGGGTCACTGCTGGAAGGAG +
Preference number: 6 (lower is better)
Translates to: EAGRKRGARVTR*EWWPLGHCWKE
Trigger: CTCCTTCCAGCAGTGACCCAGTGGCCACCACTCCCACCGGGTGACCCGAGCTCCACGTTTCCTGCCAGCCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462493.1
CDS TCA 72 bp ACCAGCCGCTGGTCCCGCTCTCTGGGAAGATCGCCTTaGGGACCTGCTGCGCCCCGAGTCTTCCTTCTGGTG +
Preference number: 6 (lower is better)
Translates to: TSRWSRSLGRSP*GPAAPRVFLLV
Trigger: CACCAGAAGGAAGACTCGGGGCGCAGCAGGTCCTCAAGGCGATCTTCCCAGAGAGCGGGACCAGCGGCTGGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327979.8
CDS GCA 72 bp CTGGTCCCGCTCTCTGGGAAGATCGCCTTGAGGACCTaGTGCGCCCCGAGTCTTCCTTCTGGTGCAGGGAGG +
Preference number: 6 (lower is better)
Translates to: LVPLSGKIALRT*CAPSLPSGAGR
Trigger: CCTCCCTGCACCAGAAGGAAGACTCGGGGCGCAGCAGGTCCTCAAGGCGATCTTCCCAGAGAGCGGGACCAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327979.8
CDS GCA 72 bp GCTGCCTCACTTTCCCTATTGCCGCCAGCAAGCGTCTaGTCCCATCTGGCCCGGGACTCCCGGACTCGAGCT +
Preference number: 6 (lower is better)
Translates to: AASLSLLPPASV*SHLARDSRTRA
Trigger: AGCTCGAGTCCGGGAGTCCCGGGCCAGATGGGAGCAGACGCTTGCTGGCGGCAATAGGGAAAGTGAGGCAGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327979.8
CDS CCA 72 bp GTGTGCAGGGAGAGGAAGCCAGATGCTCCCAGACACTaGGGACTGTCCTGGGCCTCCGTCCCCAAGGTGTGG +
Preference number: 6 (lower is better)
Translates to: VCRERKPDAPRH*GLSWASVPKVW
Trigger: CCACACCTTGGGGACGGAGGCCCAGGACAGTCCCCAGTGTCTGGGAGCATCTGGCTTCCTCTCCCTGCACAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000462493.1
CDS CCA 72 bp TCTCTGTCCCCGGTTGCCCCTTCCTCGTGGCCGTTCTaGCTACTCGAGGCTGTGCCGCTGTGGAACAGGGAG +
Preference number: 6 (lower is better)
Translates to: SLSPVAPSSWPF*LLEAVPLWNRE
Trigger: CTCCCTGTTCCACAGCGGCACAGCCTCGAGTAGCCAGAACGGCCACGAGGAAGGGGCAACCGGGGACAGAGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000045083.6
ENST00000327979.8
ENST00000462493.1
CDS CCA 72 bp TTTCCCTATTGCCGCCAGCAAGCGTCTGCTCCCATCTaGCCCGGGACTCCCGGACTCGAGCTAGGGCTCTGC +
Preference number: 6 (lower is better)
Translates to: FPYCRQQASAPI*PGTPGLELGLC
Trigger: GCAGAGCCCTAGCTCGAGTCCGGGAGTCCCGGGCCAGATGGGAGCAGACGCTTGCTGGCGGCAATAGGGAAA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327979.8
CDS CCA 72 bp GTCACTGCTGGAAGGAGGTGCACTCACCGGAGACCCTaGGAGCCCCCAAACAGGGACAGCTCATCCAGGGCG +
Preference number: 6 (lower is better)
Translates to: VTAGRRCTHRRP*EPPNRDSSSRA
Trigger: CGCCCTGGATGAGCTGTCCCTGTTTGGGGGCTCCCAGGGTCTCCGGTGAGTGCACCTCCTTCCAGCAGTGAC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000462493.1
CDS CAA 72 bp CACCAGCCGCTGGTCCCGCTCTCTGGGAAGATCGCCTaGAGGACCTGCTGCGCCCCGAGTCTTCCTTCTGGT +
Preference number: 6 (lower is better)
Translates to: HQPLVPLSGKIA*RTCCAPSLPSG
Trigger: ACCAGAAGGAAGACTCGGGGCGCAGCAGGTCCTCAAGGCGATCTTCCCAGAGAGCGGGACCAGCGGCTGGTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327979.8
CDS TCA 72 bp GATCTCACCCACTTCGTGGTCTCTGAGGACCGGCTCTaGGGCAAGTGGGGGATGTGCGGGGATGGCATGGGG +
Preference number: 6 (lower is better)
Translates to: DLTHFVVSEDRL*GKWGMCGDGMG
Trigger: CCCCATGCCATCCCCGCACATCCCCCACTTGCCTCAGAGCCGGTCCTCAGAGACCACGAAGTGGGTGAGATC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000462493.1
CDS GCA 72 bp CAGCAAAGCCTTTTCCCGGAAGCTTCTGTTCCTGACTaGACCAGCCAGGCGAGCGCTGGCCGCCCTGCACAC +
Preference number: 6 (lower is better)
Translates to: QQSLFPEASVPD*TSQASAGRPAH
Trigger: GTGTGCAGGGCGGCCAGCGCTCGCCTGGCTGGTGCAGTCAGGAACAGAAGCTTCCGGGAAAAGGCTTTGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000045083.6
ENST00000327979.8
ENST00000488529.5
CDS GCA 72 bp ATCTGGCCCGGGACTCCCGGACTCGAGCTAGGGCTCTaGAAATTCCATCCACACTGGCCACCAGCCGCTGGT +
Preference number: 6 (lower is better)
Translates to: IWPGTPGLELGL*KFHPHWPPAAG
Trigger: ACCAGCGGCTGGTGGCCAGTGTGGATGGAATTTGCAGAGCCCTAGCTCGAGTCCGGGAGTCCCGGGCCAGAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327979.8
CDS GCA 72 bp GACACTCGAGTGCAGTCCCGCCGCCCTCCTTGCAGCTaGCTCACTTTCCCTATTGCCGCCAGCAAGCGTCTG +
Preference number: 6 (lower is better)
Translates to: DTRVQSRRPPCS*LTFPIAASKRL
Trigger: CAGACGCTTGCTGGCGGCAATAGGGAAAGTGAGGCAGCTGCAAGGAGGGCGGCGGGACTGCACTCGAGTGTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327979.8
CDS GCA 72 bp GGTCTGGACACTCGAGTGCAGTCCCGCCGCCCTCCTTaGAGCTGCCTCACTTTCCCTATTGCCGCCAGCAAG +
Preference number: 6 (lower is better)
Translates to: GLDTRVQSRRPP*SCLTFPIAASK
Trigger: CTTGCTGGCGGCAATAGGGAAAGTGAGGCAGCTGCAAGGAGGGCGGCGGGACTGCACTCGAGTGTCCAGACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327979.8
CDS CCA 72 bp GGGGACTGTCCTGGGCCTCCGTCCCCAAGGTGTGGCTaGAGGAAGCAGAGTCTACTCCCGCTAAGTCTGTCC +
Preference number: 6 (lower is better)
Translates to: GDCPGPPSPRCG*RKQSLLPLSLS
Trigger: GGACAGACTTAGCGGGAGTAGACTCTGCTTCCTCCAGCCACACCTTGGGGACGGAGGCCCAGGACAGTCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000462493.1
CDS CCA 72 bp CCCTTGAGGTGTTTGAGCGCTAGGCATGCGGCCTGCTaGAGCCTTGCGTCGTTCTCTGCCAGGGCGTTGGTG +
Preference number: 6 (lower is better)
Translates to: PLRCLSARHAAC*SLASFSARALV
Trigger: CACCAACGCCCTGGCAGAGAACGACGCAAGGCTCCAGCAGGCCGCATGCCTAGCGCTCAAACACCTCAAGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000045083.6
ENST00000327979.8
ENST00000462842.1
CDS CCA 72 bp CTGCCGGGCTCTGATAATGCAGCCGGGACTCTTATCTaGCCTGTGTCAGGGTGCAGGCGGCCATGGAGCTGG +
Preference number: 6 (lower is better)
Translates to: LPGSDNAAGTLI*PVSGCRRPWSW
Trigger: CCAGCTCCATGGCCGCCTGCACCCTGACACAGGCCAGATAAGAGTCCCGGCTGCATTATCAGAGCCCGGCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327979.8
CDS CAA 90 bp CCATCGAGCAGGTCTGGACACTCGAGTGCAGTCCCGCCGCCCTCCTaGCAGCTGCCTCACTTTCCCTATTGCCGCCAGCAAGCGTCTGCT +
Preference number: 6 (lower is better)
Translates to: PSSRSGHSSAVPPPS*QLPHFPYCRQQASA
Trigger: AGCAGACGCTTGCTGGCGGCAATAGGGAAAGTGAGGCAGCTGCAAGGAGGGCGGCGGGACTGCACTCGAGTGTCCAGACCTGCTCGATGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327979.8
CDS TCA 72 bp ACGTGCTGGTCTCCGTGTCTCGGGGGTCCTCAGAGCTaGAGGAGTCCATCTCAGGCAGCTCCTGACTCTGGC +
Preference number: 6 (lower is better)
Translates to: TCWSPCLGGPQS*RSPSQAAPDSG
Trigger: GCCAGAGTCAGGAGCTGCCTGAGATGGACTCCTTCAGCTCTGAGGACCCCCGAGACACGGAGACCAGCACGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000045083.6
ENST00000327979.8
ENST00000462493.1
CDS TCA 72 bp AGAACAGCAAAGCCTTTTCCCGGAAGCTTCTGTTCCTaGCTGCACCAGCCAGGCGAGCGCTGGCCGCCCTGC +
Preference number: 6 (lower is better)
Translates to: RTAKPFPGSFCS*LHQPGERWPPC
Trigger: GCAGGGCGGCCAGCGCTCGCCTGGCTGGTGCAGTCAGGAACAGAAGCTTCCGGGAAAAGGCTTTGCTGTTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000045083.6
ENST00000327979.8
ENST00000488529.5
CDS GCA 72 bp AAGCAGAGTCTACTCCCGCTAAGTCTGTCCGCTCACTaGTGGCCAAAGCTGCCCTGCGTCTCCTCCCCACCG +
Preference number: 6 (lower is better)
Translates to: KQSLLPLSLSAH*WPKLPCVSSPP
Trigger: CGGTGGGGAGGAGACGCAGGGCAGCTTTGGCCAGCAGTGAGCGGACAGACTTAGCGGGAGTAGACTCTGCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000462493.1
CDS GCA 72 bp GTTCCTGTTGATGGACTTTGCGATCCTCCGGCTCTGTaGACTGCTGAAGCCTGCGAAGGAGGCGCTCCGGCC +
Preference number: 6 (lower is better)
Translates to: VPVDGLCDPPAL*TAEACEGGAPA
Trigger: GGCCGGAGCGCCTCCTTCGCAGGCTTCAGCAGTGCACAGAGCCGGAGGATCGCAAAGTCCATCAACAGGAAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000045083.6
ENST00000327979.8
ENST00000462493.1
CDS GCA 72 bp ATGCCCTTGAGGTGTTTGAGCGCTAGGCATGCGGCCTaGTGGAGCCTTGCGTCGTTCTCTGCCAGGGCGTTG +
Preference number: 6 (lower is better)
Translates to: MPLRCLSARHAA*WSLASFSARAL
Trigger: CAACGCCCTGGCAGAGAACGACGCAAGGCTCCAGCAGGCCGCATGCCTAGCGCTCAAACACCTCAAGGGCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000045083.6
ENST00000327979.8
ENST00000462842.1
CDS GCA 72 bp CCGAGTCTTCCTTCTGGTGCAGGGAGGCCGGTGCCCTaGCGGGCTCTGATAATGCAGCCGGGACTCTTATCT +
Preference number: 6 (lower is better)
Translates to: PSLPSGAGRPVP*RALIMQPGLLS
Trigger: AGATAAGAGTCCCGGCTGCATTATCAGAGCCCGGCAGGGCACCGGCCTCCCTGCACCAGAAGGAAGACTCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327979.8
CDS CCA 72 bp AACCTCACCGACATGGTGGTCACCATCGAGCAGGTCTaGACACTCGAGTGCAGTCCCGCCGCCCTCCTTGCA +
Preference number: 6 (lower is better)
Translates to: NLTDMVVTIEQV*TLECSPAALLA
Trigger: TGCAAGGAGGGCGGCGGGACTGCACTCGAGTGTCCAGACCTGCTCGATGGTGACCACCATGTCGGTGAGGTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327979.8
CDS CCA 72 bp CTGCTGTCACCAGCCTCTCCTTACAGACAAGGAACCTaGCCTTCTGAGGGGAGGTCCCACGGGGCAGAGGCA +
Preference number: 6 (lower is better)
Translates to: LLSPASPYRQGT*PSEGRSHGAEA
Trigger: TGCCTCTGCCCCGTGGGACCTCCCCTCAGAAGGCCAGGTTCCTTGTCTGTAAGGAGAGGCTGGTGACAGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482129.1
CDS CAA 72 bp TCCCAGGTCTGGCTGTCATCTGACTCGATCCGACCCTaGAGCTTCCAACGCTGGCGGCCCAGACGCATGAGC +
Preference number: 6 (lower is better)
Translates to: SQVWLSSDSIRP*SFQRWRPRRMS
Trigger: GCTCATGCGTCTGGGCCGCCAGCGTTGGAAGCTCAAGGGTCGGATCGAGTCAGATGACAGCCAGACCTGGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000045083.6
ENST00000327979.8
ENST00000462493.1
CDS CAA 90 bp TGGGAGCCCCCAAACAGGGACAGCTCATCCAGGGCGAAGTCGGCATaGAGGAAGGCGAAGCTCTCCAGGATGCACTCCATCAGGCTCTCG +
Preference number: 6 (lower is better)
Translates to: WEPPNRDSSSRAKSA*RKAKLSRMHSIRLS
Trigger: CGAGAGCCTGATGGAGTGCATCCTGGAGAGCTTCGCCTTCCTCAATGCCGACTTCGCCCTGGATGAGCTGTCCCTGTTTGGGGGCTCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000045083.6
ENST00000327979.8
ENST00000462493.1
CDS TCA 72 bp GGCCTTCTCCTCTTCGTCCCAGGTCTGGCTGTCATCTaGCTCGATCCGACCCTTGAGCTTCCAACGCTGGCG +
Preference number: 6 (lower is better)
Translates to: GLLLFVPGLAVI*LDPTLELPTLA
Trigger: CGCCAGCGTTGGAAGCTCAAGGGTCGGATCGAGTCAGATGACAGCCAGACCTGGGACGAAGAGGAGAAGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000045083.6
ENST00000327979.8
ENST00000462493.1
CDS TCA 72 bp TCCTCAGAGCTGAAGGAGTCCATCTCAGGCAGCTCCTaGCTCTGGCTTCTTAGGCTGGGACCCCGGAGGTCG +
Preference number: 6 (lower is better)
Translates to: SSELKESISGSS*LWLLRLGPRRS
Trigger: CGACCTCCGGGGTCCCAGCCTAAGAAGCCAGAGTCAGGAGCTGCCTGAGATGGACTCCTTCAGCTCTGAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000045083.6
ENST00000327979.8
ENST00000462493.1
CDS TCA 72 bp CCATCAGCAGCACGTCCAGCTCTGGGGCACCGGCTGTaGGTTCCCTGGATGACGCTTTCAGTGATGACGGTG +
Preference number: 6 (lower is better)
Translates to: PSAARPALGHRL*VPWMTLSVMTV
Trigger: CACCGTCATCACTGAAAGCGTCATCCAGGGAACTCACAGCCGGTGCCCCAGAGCTGGACGTGCTGCTGATGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000045083.6
ENST00000327979.8
ENST00000488529.5
CDS GCA 72 bp GCTTCGGGTCTGCACAGACCGACCCCTTCCGCAGCGTaGCGTACATCTTGGAGGATTTTGCAGGCATTCGCG +
Preference number: 6 (lower is better)
Translates to: ASGLHRPTPSAA*RTSWRILQAFA
Trigger: CGCGAATGCCTGCAAAATCCTCCAAGATGTACGGCACGCTGCGGAAGGGGTCGGTCTGTGCAGACCCGAAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000045083.6
ENST00000327979.8
ENST00000462493.1
CDS GCA 72 bp GGACAGACAGGTAGTATCTCTCCCGGAAGCTGGGGGTaGTCGGGGGTGTCCAGTTGTACAAGGAGCCCTTCC +
Preference number: 6 (lower is better)
Translates to: GQTGSISPGSWG*SGVSSCTRSPS
Trigger: GGAAGGGCTCCTTGTACAACTGGACACCCCCGAGCACCCCCAGCTTCCGGGAGAGATACTACCTGTCTGTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000045083.6
ENST00000327979.8
ENST00000462493.1
CDS CCA 72 bp CTTCTACTCCGTGTCCCTCGCTGCCTCTCTCTGGCCTaGCACTTAGAACTGATGCCGTTCAGACCCGGCTGG +
Preference number: 6 (lower is better)
Translates to: LLLRVPRCLSLA*HLELMPFRPGW
Trigger: CCAGCCGGGTCTGAACGGCATCAGTTCTAAGTGCCAGGCCAGAGAGAGGCAGCGAGGGACACGGAGTAGAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000462493.1
CDS CCA 72 bp GGACTCGAGCTAGGGCTCTGCAAATTCCATCCACACTaGCCACCAGCCGCTGGTCCCGCTCTCTGGGAAGAT +
Preference number: 6 (lower is better)
Translates to: GLELGLCKFHPH*PPAAGPALWED
Trigger: ATCTTCCCAGAGAGCGGGACCAGCGGCTGGTGGCCAGTGTGGATGGAATTTGCAGAGCCCTAGCTCGAGTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327979.8
CDS CCA 72 bp TTACCAGGGCCACCACCTGCAGTCCCCACAACAACCTaGGAGGGGCTGCTGTCACCAGCCTCTCCTTACAGA +
Preference number: 6 (lower is better)
Translates to: LPGPPPAVPTTT*EGLLSPASPYR
Trigger: TCTGTAAGGAGAGGCTGGTGACAGCAGCCCCTCCCAGGTTGTTGTGGGGACTGCAGGTGGTGGCCCTGGTAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482129.1
CDS TCA 72 bp TGCAGCTTCCGGACCACCTTGGCCTGTCCCGCACAGTaGAGCTCCTCGATGAGTGTCACTTCCTTGGTGAGC +
Preference number: 6 (lower is better)
Translates to: CSFRTTLACPAQ*SSSMSVTSLVS
Trigger: GCTCACCAAGGAAGTGACACTCATCGAGGAGCTTCACTGTGCGGGACAGGCCAAGGTGGTCCGGAAGCTGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000045083.6
ENST00000327979.8
ENST00000488529.5
CDS TCA 72 bp CGGGGCAGAGGCACAGCTGGGATCACAGCTACTGTTTaGCGGCACATTCTGCACCTTGAATGTGGCCTGGGG +
Preference number: 6 (lower is better)
Translates to: RGRGTAGITATV*RHILHLECGLG
Trigger: CCCCAGGCCACATTCAAGGTGCAGAATGTGCCGTCAAACAGTAGCTGTGATCCCAGCTGTGCCTCTGCCCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482129.1
CDS TCA 72 bp CAGGCACCCCTTCGTCCGCGAGGCCTGTGGGATGACTaGAAGCCCCAGTTCAGAAACCTGAATGGTGACTCG +
Preference number: 6 (lower is better)
Translates to: QAPLRPRGLWDD*KPQFRNLNGDS
Trigger: CGAGTCACCATTCAGGTTTCTGAACTGGGGCTTTCAGTCATCCCACAGGCCTCGCGGACGAAGGGGTGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000482129.1
ENST00000488529.5
CDS GCA 72 bp TTCGAAGATCTTCTTCACCTGCTGGGGCTTCGGGTCTaGACAGACCGACCCCTTCCGCAGCGTGCCGTACAT +
Preference number: 6 (lower is better)
Translates to: FEDLLHLLGLRV*TDRPLPQRAVH
Trigger: ATGTACGGCACGCTGCGGAAGGGGTCGGTCTGTGCAGACCCGAAGCCCCAGCAGGTGAAGAAGATCTTCGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000045083.6
ENST00000327979.8
ENST00000462493.1
CDS GCA 72 bp ATGGTACCCAACTCCGTGATGTCCACCACGATGACCTaGGGCCGCGTCGTGAAGAAGTCGGCGATGTCACAC +
Preference number: 6 (lower is better)
Translates to: MVPNSVMSTTMT*GRVVKKSAMSH
Trigger: GTGTGACATCGCCGACTTCTTCACGACGCGGCCGCAGGTCATCGTGGTGGACATCACGGAGTTGGGTACCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000045083.6
ENST00000327979.8
ENST00000462493.1
CDS GCA 72 bp ATGTGGCCTGGGGTTACCTCACTGAACCCCGTGCAGTaGCCTCCTCCTATGCAGATAGGGAAGCAGAGGCTC +
Preference number: 6 (lower is better)
Translates to: MWPGVTSLNPVQ*PPPMQIGKQRL
Trigger: GAGCCTCTGCTTCCCTATCTGCATAGGAGGAGGGCACTGCACGGGGTTCAGTGAGGTAACCCCAGGCCACAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482129.1
CDS GCA 72 bp CACCACCTGCAGTCCCCACAACAACCTGGGAGGGGCTaGTGTCACCAGCCTCTCCTTACAGACAAGGAACCT +
Preference number: 6 (lower is better)
Translates to: HHLQSPQQPGRG*CHQPLLTDKEP
Trigger: AGGTTCCTTGTCTGTAAGGAGAGGCTGGTGACAGCAGCCCCTCCCAGGTTGTTGTGGGGACTGCAGGTGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482129.1
CDS CCA 72 bp GCTGTAGGACAGACAGGTAGTATCTCTCCCGGAAGCTaGGGGTGCTCGGGGGTGTCCAGTTGTACAAGGAGC +
Preference number: 6 (lower is better)
Translates to: AVGQTGSISPGS*GCSGVSSCTRS
Trigger: GCTCCTTGTACAACTGGACACCCCCGAGCACCCCCAGCTTCCGGGAGAGATACTACCTGTCTGTCCTACAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000045083.6
ENST00000327979.8
ENST00000462493.1
CDS CCA 72 bp GGCTGTGAATGGAGGGGTAAGCAGAAGTGGAGTCCATaGTTCCGGGTCCATCAGCCACCAGGTGCCGACAGT +
Preference number: 6 (lower is better)
Translates to: GCEWRGKQKWSP*FRVHQPPGADS
Trigger: ACTGTCGGCACCTGGTGGCTGATGGACCCGGAACCATGGACTCCACTTCTGCTTACCCCTCCATTCACAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462842.1
CDS CAA 72 bp GCACAGACCGACCCCTTCCGCAGCGTGCCGTACATCTaGGAGGATTTTGCAGGCATTCGCGATCTCACGGAG +
Preference number: 6 (lower is better)
Translates to: AQTDPFRSVPYI*EDFAGIRDLTE
Trigger: CTCCGTGAGATCGCGAATGCCTGCAAAATCCTCCAAGATGTACGGCACGCTGCGGAAGGGGTCGGTCTGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000045083.6
ENST00000327979.8
ENST00000462493.1
CDS CAA 90 bp TTCGGGTCTGCACAGACCGACCCCTTCCGCAGCGTGCCGTACATCTaGGAGGATTTTGCAGGCATTCGCGATCTCACGGAGTTCCTGTTG +
Preference number: 6 (lower is better)
Translates to: FGSAQTDPFRSVPYI*EDFAGIRDLTEFLL
Trigger: CAACAGGAACTCCGTGAGATCGCGAATGCCTGCAAAATCCTCCAAGATGTACGGCACGCTGCGGAAGGGGTCGGTCTGTGCAGACCCGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000045083.6
ENST00000327979.8
ENST00000462493.1
CDS GCA 72 bp AACTTTGGCTCTAAGCATCTTACCAGGGCCACCACCTaGAGTCCCCACAACAACCTGGGAGGGGCTGCTGTC +
Preference number: 6 (lower is better)
Translates to: NFGSKHLTRATT*SPHNNLGGAAV
Trigger: GACAGCAGCCCCTCCCAGGTTGTTGTGGGGACTGCAGGTGGTGGCCCTGGTAAGATGCTTAGAGCCAAAGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482129.1
CDS CCA 72 bp CACAGACCGACCCCTTCCGCAGCGTGCCGTACATCTTaGAGGATTTTGCAGGCATTCGCGATCTCACGGAGT +
Preference number: 6 (lower is better)
Translates to: HRPTPSAACRTS*RILQAFAISRS
Trigger: ACTCCGTGAGATCGCGAATGCCTGCAAAATCCTCCAAGATGTACGGCACGCTGCGGAAGGGGTCGGTCTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000045083.6
ENST00000327979.8
ENST00000462493.1
CDS CCA 72 bp CCTGCTGGAGCCTTGCGTCGTTCTCTGCCAGGGCGTTaGTGTAGAACAGCAAAGCCTTTTCCCGGAAGCTTC +
Preference number: 6 (lower is better)
Translates to: PAGALRRSLPGR*CRTAKPFPGSF
Trigger: GAAGCTTCCGGGAAAAGGCTTTGCTGTTCTACACCAACGCCCTGGCAGAGAACGACGCAAGGCTCCAGCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS CCA 72 bp CTGTTTGACGGCACATTCTGCACCTTGAATGTGGCCTaGGGTTACCTCACTGAACCCCGTGCAGTGCCCTCC +
Preference number: 6 (lower is better)
Translates to: LFDGTFCTLNVA*GYLTEPRAVPS
Trigger: GGAGGGCACTGCACGGGGTTCAGTGAGGTAACCCCAGGCCACATTCAAGGTGCAGAATGTGCCGTCAAACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482129.1
CDS CAA 90 bp AAGCTCTCAGTATCAAACGGGTTCCACTGCACCTCCAGCTGCAGCTaGATGGTACCCAACTCCGTGATGTCCACCACGATGACCTGCGGC +
Preference number: 6 (lower is better)
Translates to: KLSVSNGFHCTSSCS*MVPNSVMSTTMTCG
Trigger: GCCGCAGGTCATCGTGGTGGACATCACGGAGTTGGGTACCATCAAGCTGCAGCTGGAGGTGCAGTGGAACCCGTTTGATACTGAGAGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000045083.6
ENST00000327979.8
ENST00000462493.1
CDS TCA 72 bp CCTGCTGCCCATAGAAAACTTGCCCGTGGGGCTGGGTaGCACCAGGAAGCTCTCAGTATCAAACGGGTTCCA +
Preference number: 6 (lower is better)
Translates to: PAAHRKLARGAG*HQEALSIKRVP
Trigger: TGGAACCCGTTTGATACTGAGAGCTTCCTGGTGTCACCCAGCCCCACGGGCAAGTTTTCTATGGGCAGCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000045083.6
ENST00000327979.8
ENST00000462493.1
CDS TCA 72 bp CAAACAGGGACAGCTCATCCAGGGCGAAGTCGGCATTaGGGAAGGCGAAGCTCTCCAGGATGCACTCCATCA +
Preference number: 6 (lower is better)
Translates to: QTGTAHPGRSRH*GRRSSPGCTPS
Trigger: TGATGGAGTGCATCCTGGAGAGCTTCGCCTTCCTCAATGCCGACTTCGCCCTGGATGAGCTGTCCCTGTTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000045083.6
ENST00000327979.8
ENST00000462493.1
CDS CCA 72 bp CCTCTTTTCAATGCTTCGAAGATCTTCTTCACCTGCTaGGGCTTCGGGTCTGCACAGACCGACCCCTTCCGC +
Preference number: 6 (lower is better)
Translates to: PLFNASKIFFTC*GFGSAQTDPFR
Trigger: GCGGAAGGGGTCGGTCTGTGCAGACCCGAAGCCCCAGCAGGTGAAGAAGATCTTCGAAGCATTGAAAAGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000045083.6
ENST00000327979.8
ENST00000462493.1
CDS CAA 72 bp TTGTACAAGGAGCCCTTCCTGCTGCCCATAGAAAACTaGCCCGTGGGGCTGGGTGACACCAGGAAGCTCTCA +
Preference number: 6 (lower is better)
Translates to: LYKEPFLLPIEN*PVGLGDTRKLS
Trigger: TGAGAGCTTCCTGGTGTCACCCAGCCCCACGGGCAAGTTTTCTATGGGCAGCAGGAAGGGCTCCTTGTACAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000045083.6
ENST00000327979.8
ENST00000462493.1
CDS CAA 90 bp GGTGTCCAGTTGTACAAGGAGCCCTTCCTGCTGCCCATAGAAAACTaGCCCGTGGGGCTGGGTGACACCAGGAAGCTCTCAGTATCAAAC +
Preference number: 6 (lower is better)
Translates to: GVQLYKEPFLLPIEN*PVGLGDTRKLSVSN
Trigger: GTTTGATACTGAGAGCTTCCTGGTGTCACCCAGCCCCACGGGCAAGTTTTCTATGGGCAGCAGGAAGGGCTCCTTGTACAACTGGACACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000045083.6
ENST00000327979.8
ENST00000462493.1
CDS TCA 72 bp GCCTGTGGGATGACTGAAAGCCCCAGTTCAGAAACCTaGATGGTGACTCGGGGAGAGCACATGACAAGGACC +
Preference number: 6 (lower is better)
Translates to: ACGMTESPSSET*MVTRGEHMTRT
Trigger: GGTCCTTGTCATGTGCTCTCCCCGAGTCACCATTCAGGTTTCTGAACTGGGGCTTTCAGTCATCCCACAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000482129.1
ENST00000488529.5
CDS GCA 72 bp CCCCTTCCGCAGCGTGCCGTACATCTTGGAGGATTTTaGAGGCATTCGCGATCTCACGGAGTTCCTGTTGAT +
Preference number: 6 (lower is better)
Translates to: PLPQRAVHLGGF*RHSRSHGVPVD
Trigger: ATCAACAGGAACTCCGTGAGATCGCGAATGCCTGCAAAATCCTCCAAGATGTACGGCACGCTGCGGAAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000045083.6
ENST00000327979.8
ENST00000462493.1
CDS GCA 72 bp CTCTCAGTATCAAACGGGTTCCACTGCACCTCCAGCTaGAGCTTGATGGTACCCAACTCCGTGATGTCCACC +
Preference number: 6 (lower is better)
Translates to: LSVSNGFHCTSS*SLMVPNSVMST
Trigger: GGTGGACATCACGGAGTTGGGTACCATCAAGCTGCAGCTGGAGGTGCAGTGGAACCCGTTTGATACTGAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000045083.6
ENST00000327979.8
ENST00000462493.1
CDS CCA 72 bp TCCAGCTGTCCTGGGTACTTCCCTCTGACTCTGTGCTaGAAGGTTTTCTTGAGCTGGTTCAGCAGCGTCGTG +
Preference number: 6 (lower is better)
Translates to: SSCPGYFPLTLC*KVFLSWFSSVV
Trigger: CACGACGCTGCTGAACCAGCTCAAGAAAACCTTCCAGCACAGAGTCAGAGGGAAGTACCCAGGACAGCTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000045083.6
ENST00000327979.8
ENST00000482129.1
ENST00000488529.5
CDS GCA 72 bp TTGTGGCGTCCAGACAGGTGGTCCAGCTCAGCCTGCTaGACACACAGATACTCCTTGAGGCCTCTTTTCAAT +
Preference number: 6 (lower is better)
Translates to: LWRPDRWSSSAC*THRYSLRPLFN
Trigger: ATTGAAAAGAGGCCTCAAGGAGTATCTGTGTGTGCAGCAGGCTGAGCTGGACCACCTGTCTGGACGCCACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000045083.6
ENST00000327979.8
ENST00000462493.1
CDS CAA 72 bp GATTTTGCAGGCATTCGCGATCTCACGGAGTTCCTGTaGATGGACTTTGCGATCCTCCGGCTCTGTGCACTG +
Preference number: 6 (lower is better)
Translates to: DFAGIRDLTEFL*MDFAILRLCAL
Trigger: CAGTGCACAGAGCCGGAGGATCGCAAAGTCCATCAACAGGAACTCCGTGAGATCGCGAATGCCTGCAAAATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000045083.6
ENST00000327979.8
ENST00000462493.1
CDS TCA 72 bp TGGCTTGATGCGAGGTCCCTTCCCTGCATTCCCATGTaGCACGTGAGCAACTTTGGCTCTAAGCATCTTACC +
Preference number: 6 (lower is better)
Translates to: WLDARSLPCIPM*HVSNFGSKHLT
Trigger: GGTAAGATGCTTAGAGCCAAAGTTGCTCACGTGTCACATGGGAATGCAGGGAAGGGACCTCGCATCAAGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482129.1
CDS GCA 72 bp CAGCTGGGATCACAGCTACTGTTTGACGGCACATTCTaGACCTTGAATGTGGCCTGGGGTTACCTCACTGAA +
Preference number: 6 (lower is better)
Translates to: QLGSQLLFDGTF*TLNVAWGYLTE
Trigger: TTCAGTGAGGTAACCCCAGGCCACATTCAAGGTGCAGAATGTGCCGTCAAACAGTAGCTGTGATCCCAGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482129.1
CDS GCA 72 bp CTGCACACACAGATACTCCTTGAGGCCTCTTTTCAATaGTTCGAAGATCTTCTTCACCTGCTGGGGCTTCGG +
Preference number: 6 (lower is better)
Translates to: LHTQILLEASFQ*FEDLLHLLGLR
Trigger: CCGAAGCCCCAGCAGGTGAAGAAGATCTTCGAAGCATTGAAAAGAGGCCTCAAGGAGTATCTGTGTGTGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000045083.6
ENST00000327979.8
ENST00000462493.1
CDS CAA 90 bp CCTCCTATGCAGATAGGGAAGCAGAGGCTCAGAGATGTGAATCATTaGCCTAGAGTCACACAGCTGACTGAAGAGTGTGCTGCAACTCCA +
Preference number: 6 (lower is better)
Translates to: PPMQIGKQRLRDVNH*PRVTQLTEECAATP
Trigger: TGGAGTTGCAGCACACTCTTCAGTCAGCTGTGTGACTCTAGGCAAATGATTCACATCTCTGAGCCTCTGCTTCCCTATCTGCATAGGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482129.1
CDS CAA 72 bp GAGGCCTGTGGGATGATCTCTTCAATGGATGTTGCCTaGCCGACCTTCTCAAAGTCAAGGACAGAAAGTGTC +
Preference number: 6 (lower is better)
Translates to: EACGMISSMDVA*PTFSKSRTESV
Trigger: GACACTTTCTGTCCTTGACTTTGAGAAGGTCGGCAAGGCAACATCCATTGAAGAGATCATCCCACAGGCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000045083.6
ENST00000327979.8
CDS GCA 72 bp TTCTCAAAGTCAAGGACAGAAAGTGTCTCCAGAACGTaGTTTTGCTGTGCCACTTCTTCCAGGAGGCATTCC +
Preference number: 6 (lower is better)
Translates to: FSKSRTESVSRT*FCCATSSRRHS
Trigger: GGAATGCCTCCTGGAAGAAGTGGCACAGCAAAAGCACGTTCTGGAGACACTTTCTGTCCTTGACTTTGAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000045083.6
ENST00000327979.8
ENST00000488529.5
CDS CAA 72 bp TTCCCTCCACTAGGACTCTCTTCAATGGATGTTGCCTaGCCGACCTTCTCAAAGTCAAGGACAGAAAGTGTC +
Preference number: 6 (lower is better)
Translates to: FPPLGLSSMDVA*PTFSKSRTESV
Trigger: GACACTTTCTGTCCTTGACTTTGAGAAGGTCGGCAAGGCAACATCCATTGAAGAGAGTCCTAGTGGAGGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488529.5
CDS CAA 90 bp GCCCATCTTTCTCTAAACAACGTTCAGGACACGATCGGTCCATCTTaGGGCCCTGTGTACACAGTCACAAGATCTATACTGTGGTGTTTA +
Preference number: 6 (lower is better)
Translates to: AHLSLNNVQDTIGPS*GPVYTVTRSILWCL
Trigger: TAAACACCACAGTATAGATCTTGTGACTGTGTACACAGGGCCCAAAGATGGACCGATCGTGTCCTGAACGTTGTTTAGAGAAAGATGGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462842.1
CDS CAA 72 bp TCTCTAAACAACGTTCAGGACACGATCGGTCCATCTTaGGGCCCTGTGTACACAGTCACAAGATCTATACTG +
Preference number: 6 (lower is better)
Translates to: SLNNVQDTIGPS*GPVYTVTRSIL
Trigger: CAGTATAGATCTTGTGACTGTGTACACAGGGCCCAAAGATGGACCGATCGTGTCCTGAACGTTGTTTAGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462842.1