RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RIPOR2 (Homo sapiens)

Ensembl gene IDs: ENSG00000111913

Ensembl transcript IDs: ENST00000259698.9, ENST00000378023.8, ENST00000463828.1, ENST00000473070.1, ENST00000510784.8, ENST00000538035.6, ENST00000540914.5, ENST00000606385.1, ENST00000613507.4, ENST00000643623.1, ENST00000643898.2, ENST00000644411.1, ENST00000644621.1, ENST00000645100.1, ENST00000645703.1, ENST00000647136.1, ENST00000647309.1

Found 1606 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AAGAATGAATGCCTTGGGCATGACAAGAAGCAGCCCTGCTTCCTCTaGAGCTCTGCCTCAAAGGGAACAAGTCCCACCACTTCCCTGACC +
Preference number: 1 (lower is better)
Translates to: KNECLGHDKKQPCFL*SSASKGTSPTTSLT
Trigger: GGTCAGGGAAGTGGTGGGACTTGTTCCCTTTGAGGCAGAGCTCCAGAGGAAGCAGGGCTGCTTCTTGTCATGCCCAAGGCATTCATTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000645100.1
ENST00000647136.1
3UTR CCA 90 bp ACTTCCCTGACCAGGCCCTGGCATCATGGGAGCAATCCCATTCTCTaGCCTGGAGCATTCTATAATGCTGGCCACATGCAGAAACATTAC +
Preference number: 1 (lower is better)
Translates to: TSLTRPWHHGSNPIL*PGAFYNAGHMQKHY
Trigger: GTAATGTTTCTGCATGTGGCCAGCATTATAGAATGCTCCAGGCCAGAGAATGGGATTGCTCCCATGATGCCAGGGCCTGGTCAGGGAAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
3UTR TCA 90 bp GATTTCTTAGCGCAAGGTAGGAAGGGCCTTGCAGGGATCTGTCTCTaGCACTCAAGATGGCACAAAAGCACATGGGAAAACGTCTTTCGG +
Preference number: 1 (lower is better)
Translates to: DFLAQGRKGLAGICL*HSRWHKSTWENVFR
Trigger: CCGAAAGACGTTTTCCCATGTGCTTTTGTGCCATCTTGAGTGTCAGAGACAGATCCCTGCAAGGCCCTTCCTACCTTGCGCTAAGAAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
3UTR CCA 90 bp ATTGGCCATGAGTTGATCACTGAGGAGGTTGAGGGATGGGCACACTaGGATCCATTAGAGGATCTTCTCTACTTCTGTTTGAAATTTTTA +
Preference number: 1 (lower is better)
Translates to: IGHELITEEVEGWAH*DPLEDLLYFCLKFL
Trigger: TAAAAATTTCAAACAGAAGTAGAGAAGATCCTCTAATGGATCCCAGTGTGCCCATCCCTCAACCTCCTCAGTGATCAACTCATGGCCAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000510784.8
ENST00000540914.5
3UTR TCA 90 bp ACAGTTGATATTCCACAGTTTAAATTACACTCACATATATTGTTTTaGTACCTTGGCATACCCCACCTTGTACACTCTTTAGAGGAAGAA +
Preference number: 1 (lower is better)
Translates to: TVDIPQFKLHSHILF*YLGIPHLVHSLEEE
Trigger: TTCTTCCTCTAAAGAGTGTACAAGGTGGGGTATGCCAAGGTATCAAAACAATATATGTGAGTGTAATTTAAACTGTGGAATATCAACTGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
3UTR-3UTR CCA 90 bp AATGCCTTGGGCATGACAAGAAGCAGCCCTGCTTCCTCTGGAGCTCTGCCTCAATCCCTGACCAGGCCCTaGCATCATGGGAGCAATCCC +
Preference number: 2 (lower is better)
Translates to: NALGMTRSSPASSGALPQSLTRP*HHGSNP
Trigger: GGGATTGCTCCCATGATGCCAGGGCCTGGTCAGGGA...TTGAGGCAGAGCTCCAGAGGAAGCAGGGCTGCTTCTTGTCATGCCCAAGGCATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000645100.1
ENST00000647136.1
3UTR-3UTR CCA 90 bp TTCCCTGACCAGGCCCTGGCATCATGGGAGCAATCCCATTCTCTGGCCTGGAGCCTGGGGTGGGTCGAATaGGACAAATTCTGCAAGTTA +
Preference number: 2 (lower is better)
Translates to: FPDQALASWEQSHSLAWSLGWVE*DKFCKL
Trigger: TAACTTGCAGAATTTGTCCCATTCGACCCACCCCAG...GCTCCAGGCCAGAGAATGGGATTGCTCCCATGATGCCAGGGCCTGGTCAGGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
3UTR-3UTR TCA 90 bp AACAAGTCCCACCACTTCCCTGACCAGGCCCTGGCATCATGGGAGCAATCCCATAGATTGGCCATGAGTTaGTCACTGAGGAGGTTGAGG +
Preference number: 2 (lower is better)
Translates to: NKSHHFPDQALASWEQSHRLAMS*SLRRLR
Trigger: CCTCAACCTCCTCAGTGATCAACTCATGGCCAATCT...ATGGGATTGCTCCCATGATGCCAGGGCCTGGTCAGGGAAGTGGTGGGACTTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510784.8
ENST00000540914.5
3UTR-3UTR GCA 90 bp GTCTTGAACTCTTGGGCTCCAGCAATCCTGGGCTTCCCAAAGTGTTGGGATTACGACAAGAAGCAGCCCTaGTTCCTCTGGAGCTCTGCC +
Preference number: 2 (lower is better)
Translates to: VLNSWAPAILGFPKCWDYDKKQP*FLWSSA
Trigger: GGCAGAGCTCCAGAGGAAGCAGGGCTGCTTCTTGTC...GTAATCCCAACACTTTGGGAAGCCCAGGATTGCTGGAGCCCAAGAGTTCAAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000645100.1
ENST00000647136.1
3UTR-3UTR CCA 90 bp TTCCCTGACCAGGCCCTGGCATCATGGGAGCAATCCCATTCTCTGGCCTGGAGCTGGCACAAAAGCACATaGGAAAACGTCTTTCGGTCT +
Preference number: 2 (lower is better)
Translates to: FPDQALASWEQSHSLAWSWHKST*ENVFRS
Trigger: AGACCGAAAGACGTTTTCCCATGTGCTTTTGTGCCA...GCTCCAGGCCAGAGAATGGGATTGCTCCCATGATGCCAGGGCCTGGTCAGGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
3UTR-3UTR CCA 90 bp AAGGGAACAAGTCCCACCACTTCCCTGACCAGGCCCTGGCATCATGGGAGCAATTATTCAAGAGGATGCTaGGGTGGGTCGAATGGGACA +
Preference number: 2 (lower is better)
Translates to: KGTSPTTSLTRPWHHGSNYSRGC*GGSNGT
Trigger: TGTCCCATTCGACCCACCCCAGCATCCTCTTGAATA...ATTGCTCCCATGATGCCAGGGCCTGGTCAGGGAAGTGGTGGGACTTGTTCCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
3UTR-3UTR CCA 90 bp CAAGAAGCAGCCCTGCTTCCTCTGGAGCTCTGCCTCAAAGGGAACAAGTCCCACTATTCAAGAGGATGCTaGGGTGGGTCGAATGGGACA +
Preference number: 2 (lower is better)
Translates to: QEAALLPLELCLKGNKSHYSRGC*GGSNGT
Trigger: TGTCCCATTCGACCCACCCCAGCATCCTCTTGAATA...GTGGGACTTGTTCCCTTTGAGGCAGAGCTCCAGAGGAAGCAGGGCTGCTTCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
3UTR-3UTR CCA 90 bp CAGCCCTGCTTCCTCTGGAGCTCTGCCTCAAAGGGAACAAGTCCCACCACTTCCCAATGCCAGTTGCTATaGGCACAGAGTTGGAGAGAA +
Preference number: 2 (lower is better)
Translates to: QPCFLWSSASKGTSPTTSQCQLL*AQSWRE
Trigger: TTCTCTCCAACTCTGTGCCCATAGCAACTGGCATTG...GGAAGTGGTGGGACTTGTTCCCTTTGAGGCAGAGCTCCAGAGGAAGCAGGGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
3UTR-3UTR TCA 90 bp AATGCCTTGGGCATGACAAGAAGCAGCCCTGCTTCCTCTGGAGCTCTGCCTCAAGCAGGGATCTGTCTCTaGCACTCAAGATGGCACAAA +
Preference number: 2 (lower is better)
Translates to: NALGMTRSSPASSGALPQAGICL*HSRWHK
Trigger: TTTGTGCCATCTTGAGTGTCAGAGACAGATCCCTGC...TTGAGGCAGAGCTCCAGAGGAAGCAGGGCTGCTTCTTGTCATGCCCAAGGCATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000645100.1
ENST00000647136.1
3UTR-3UTR TCA 90 bp TGCTTCCTCTGGAGCTCTGCCTCAAAGGGAACAAGTCCCACCACTTCCCTGACCCTCCATCCAGTTAGGTaGCACTCCTTGCTGATTTCT +
Preference number: 2 (lower is better)
Translates to: CFLWSSASKGTSPTTSLTLHPVR*HSLLIS
Trigger: AGAAATCAGCAAGGAGTGTCACCTAACTGGATGGAG...GGTCAGGGAAGTGGTGGGACTTGTTCCCTTTGAGGCAGAGCTCCAGAGGAAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
3UTR-3UTR TCA 90 bp AGCAGCCCTGCTTCCTCTGGAGCTCTGCCTCAAAGGGAACAAGTCCCACCACTTCTCCATCCAGTTAGGTaGCACTCCTTGCTGATTTCT +
Preference number: 2 (lower is better)
Translates to: SSPASSGALPQREQVPPLLHPVR*HSLLIS
Trigger: AGAAATCAGCAAGGAGTGTCACCTAACTGGATGGAG...AAGTGGTGGGACTTGTTCCCTTTGAGGCAGAGCTCCAGAGGAAGCAGGGCTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
3UTR-3UTR GCA 90 bp AACAAGTCCCACCACTTCCCTGACCAGGCCCTGGCATCATGGGAGCAATCCCATAAATATTCAAGAGGATaGTGGGGTGGGTCGAATGGG +
Preference number: 2 (lower is better)
Translates to: NKSHHFPDQALASWEQSHKYSRG*WGGSNG
Trigger: CCCATTCGACCCACCCCAGCATCCTCTTGAATATTT...ATGGGATTGCTCCCATGATGCCAGGGCCTGGTCAGGGAAGTGGTGGGACTTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
3UTR-3UTR GCA 90 bp TGCTTCCTCTGGAGCTCTGCCTCAAAGGGAACAAGTCCCACCACTTCCCTGACCAAATATTCAAGAGGATaGTGGGGTGGGTCGAATGGG +
Preference number: 2 (lower is better)
Translates to: CFLWSSASKGTSPTTSLTKYSRG*WGGSNG
Trigger: CCCATTCGACCCACCCCAGCATCCTCTTGAATATTT...GGTCAGGGAAGTGGTGGGACTTGTTCCCTTTGAGGCAGAGCTCCAGAGGAAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
3UTR-3UTR CCA 90 bp AGCAGCCCTGCTTCCTCTGGAGCTCTGCCTCAAAGGGAACAAGTCCCACCACTTCTGGGGTGGGTCGAATaGGACAAATTCTGCAAGTTA +
Preference number: 2 (lower is better)
Translates to: SSPASSGALPQREQVPPLLGWVE*DKFCKL
Trigger: TAACTTGCAGAATTTGTCCCATTCGACCCACCCCAG...AAGTGGTGGGACTTGTTCCCTTTGAGGCAGAGCTCCAGAGGAAGCAGGGCTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
3UTR-3UTR CCA 90 bp AGAAGCAGCCCTGCTTCCTCTGGAGCTCTGCCTCAAAGGGAACAAGTCCCACCACAATGCCAGTTGCTATaGGCACAGAGTTGGAGAGAA +
Preference number: 2 (lower is better)
Translates to: RSSPASSGALPQREQVPPQCQLL*AQSWRE
Trigger: TTCTCTCCAACTCTGTGCCCATAGCAACTGGCATTG...TGGTGGGACTTGTTCCCTTTGAGGCAGAGCTCCAGAGGAAGCAGGGCTGCTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
3UTR-3UTR TCA 90 bp ATGTTTGAACTATTTGGCCAGGGAATCCTACCAGTGAGTGATTTCCCTGGGGGCAACCTCTGCCTCAAGTaGTCCTCCCACCTCAGACTC +
Preference number: 2 (lower is better)
Translates to: MFELFGQGILPVSDFPGGNLCLK*SSHLRL
Trigger: GAGTCTGAGGTGGGAGGATCACTTGAGGCAGAGGTT...GCCCCCAGGGAAATCACTCACTGGTAGGATTCCCTGGCCAAATAGTTCAAACAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
3UTR-3UTR TCA 90 bp GGCATCATGGGAGCAATCCCATTCTCTGGCCTGGAGCATTCTATAATGCTGGCCGCAGGGATCTGTCTCTaGCACTCAAGATGGCACAAA +
Preference number: 2 (lower is better)
Translates to: GIMGAIPFSGLEHSIMLAAGICL*HSRWHK
Trigger: TTTGTGCCATCTTGAGTGTCAGAGACAGATCCCTGC...GGCCAGCATTATAGAATGCTCCAGGCCAGAGAATGGGATTGCTCCCATGATGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
3UTR-3UTR GCA 90 bp GTGATTTCCCTGGGGGCAGTAACCACCCCTCAGGATGTCCTTCTTTCTAATCCCGCAATTATGGCTCACTaGAGCCTGAATCTTCTGGGC +
Preference number: 2 (lower is better)
Translates to: VISLGAVTTPQDVLLSNPAIMAH*SLNLLG
Trigger: GCCCAGAAGATTCAGGCTGCAGTGAGCCATAATTGC...GGGATTAGAAAGAAGGACATCCTGAGGGGTGGTTACTGCCCCCAGGGAAATCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
3UTR-3UTR GCA 90 bp GAACTATTTGGCCAGGGAATCCTACCAGTGAGTGATTTCCCTGGGGGCAGTAACTCACCCAGTCTGGAGTaGAGTGGGGCAATTATGGCT +
Preference number: 2 (lower is better)
Translates to: ELFGQGILPVSDFPGGSNSPSLE*SGAIMA
Trigger: AGCCATAATTGCCCCACTGCACTCCAGACTGGGTGA...GTTACTGCCCCCAGGGAAATCACTCACTGGTAGGATTCCCTGGCCAAATAGTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
3UTR-3UTR CCA 90 bp AGAAGCAGCCCTGCTTCCTCTGGAGCTCTGCCTCAAAGGGAACAAGTCCCACCACACAATATCTGGGACTaGTTGCAGAAGAATCCAGAG +
Preference number: 2 (lower is better)
Translates to: RSSPASSGALPQREQVPPHNIWD*LQKNPE
Trigger: CTCTGGATTCTTCTGCAACCAGTCCCAGATATTGTG...TGGTGGGACTTGTTCCCTTTGAGGCAGAGCTCCAGAGGAAGCAGGGCTGCTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510784.8
ENST00000540914.5
3UTR-3UTR CCA 90 bp GGCATCATGGGAGCAATCCCATTCTCTGGCCTGGAGCATTCTATAATGCTGGCCAAGAGGATGCTGGGGTaGGTCGAATGGGACAAATTC +
Preference number: 2 (lower is better)
Translates to: GIMGAIPFSGLEHSIMLAKRMLG*VEWDKF
Trigger: GAATTTGTCCCATTCGACCCACCCCAGCATCCTCTT...GGCCAGCATTATAGAATGCTCCAGGCCAGAGAATGGGATTGCTCCCATGATGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
3UTR-3UTR CCA 90 bp GGCATCATGGGAGCAATCCCATTCTCTGGCCTGGAGCATTCTATAATGCTGGCCTATTCAAGAGGATGCTaGGGTGGGTCGAATGGGACA +
Preference number: 2 (lower is better)
Translates to: GIMGAIPFSGLEHSIMLAYSRGC*GGSNGT
Trigger: TGTCCCATTCGACCCACCCCAGCATCCTCTTGAATA...GGCCAGCATTATAGAATGCTCCAGGCCAGAGAATGGGATTGCTCCCATGATGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
3UTR-3UTR CCA 90 bp AATGCCTTGGGCATGACAAGAAGCAGCCCTGCTTCCTCTGGAGCTCTGCCTCAACAATGCCAGTTGCTATaGGCACAGAGTTGGAGAGAA +
Preference number: 2 (lower is better)
Translates to: NALGMTRSSPASSGALPQQCQLL*AQSWRE
Trigger: TTCTCTCCAACTCTGTGCCCATAGCAACTGGCATTG...TTGAGGCAGAGCTCCAGAGGAAGCAGGGCTGCTTCTTGTCATGCCCAAGGCATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000645100.1
ENST00000647136.1
3UTR-3UTR CCA 90 bp AAACCATGTCAACCACAAAGCCTTGGGAAACAGAACTGCTATATCCCTCTGCCTTCCCTGACCAGGCCCTaGCATCATGGGAGCAATCCC +
Preference number: 2 (lower is better)
Translates to: KPCQPQSLGKQNCYIPLPSLTRP*HHGSNP
Trigger: GGGATTGCTCCCATGATGCCAGGGCCTGGTCAGGGA...AGGCAGAGGGATATAGCAGTTCTGTTTCCCAAGGCTTTGTGGTTGACATGGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510784.8
ENST00000540914.5
3UTR-3UTR TCA 90 bp GTGATTTCCCTGGGGGCAGTAACCACCCCTCAGGATGTCCTTCTTTCTAATCCCCCATTAGGATTTCTCTaGCTTCTAGGTTCCTCCACC +
Preference number: 2 (lower is better)
Translates to: VISLGAVTTPQDVLLSNPPLGFL*LLGSST
Trigger: GGTGGAGGAACCTAGAAGTCAGAGAAATCCTAATGG...GGGATTAGAAAGAAGGACATCCTGAGGGGTGGTTACTGCCCCCAGGGAAATCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
3UTR-3UTR GCA 90 bp AACAAGTCCCACCACTTCCCTGACCAGGCCCTGGCATCATGGGAGCAATCCCATTTACAAGCAAAACAATaGCAGTTGCTATGGGCACAG +
Preference number: 2 (lower is better)
Translates to: NKSHHFPDQALASWEQSHLQAKQ*QLLWAQ
Trigger: CTGTGCCCATAGCAACTGGCATTGTTTTGCTTGTAA...ATGGGATTGCTCCCATGATGCCAGGGCCTGGTCAGGGAAGTGGTGGGACTTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
3UTR-3UTR GCA 90 bp CAAGAAGCAGCCCTGCTTCCTCTGGAGCTCTGCCTCAAAGGGAACAAGTCCCACTTACAAGCAAAACAATaGCAGTTGCTATGGGCACAG +
Preference number: 2 (lower is better)
Translates to: QEAALLPLELCLKGNKSHLQAKQ*QLLWAQ
Trigger: CTGTGCCCATAGCAACTGGCATTGTTTTGCTTGTAA...GTGGGACTTGTTCCCTTTGAGGCAGAGCTCCAGAGGAAGCAGGGCTGCTTCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
3UTR-3UTR CCA 90 bp GGCATCATGGGAGCAATCCCATTCTCTGGCCTGGAGCATTCTATAATGCTGGCCCTGGGGTGGGTCGAATaGGACAAATTCTGCAAGTTA +
Preference number: 2 (lower is better)
Translates to: GIMGAIPFSGLEHSIMLALGWVE*DKFCKL
Trigger: TAACTTGCAGAATTTGTCCCATTCGACCCACCCCAG...GGCCAGCATTATAGAATGCTCCAGGCCAGAGAATGGGATTGCTCCCATGATGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
3UTR-3UTR CCA 90 bp AGAAGCAGCCCTGCTTCCTCTGGAGCTCTGCCTCAAAGGGAACAAGTCCCACCAAGCAATCCCATTCTCTaGCCTGGAGCATTCTATAAT +
Preference number: 2 (lower is better)
Translates to: RSSPASSGALPQREQVPPSNPIL*PGAFYN
Trigger: ATTATAGAATGCTCCAGGCCAGAGAATGGGATTGCT...TGGTGGGACTTGTTCCCTTTGAGGCAGAGCTCCAGAGGAAGCAGGGCTGCTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
3UTR-3UTR TCA 90 bp ATGTTTGAACTATTTGGCCAGGGAATCCTACCAGTGAGTGATTTCCCTGGGGGCGGGACTACTCAACCCTaGGAACACGACCGAGAAAAA +
Preference number: 2 (lower is better)
Translates to: MFELFGQGILPVSDFPGGGTTQP*EHDREK
Trigger: TTTTTCTCGGTCGTGTTCTCAGGGTTGAGTAGTCCC...GCCCCCAGGGAAATCACTCACTGGTAGGATTCCCTGGCCAAATAGTTCAAACAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
3UTR-3UTR TCA 90 bp GCAATCCCATTCTCTGGCCTGGAGCATTCTATAATGCTGGCCACATGCAGAAACGCAGGGATCTGTCTCTaGCACTCAAGATGGCACAAA +
Preference number: 2 (lower is better)
Translates to: AIPFSGLEHSIMLATCRNAGICL*HSRWHK
Trigger: TTTGTGCCATCTTGAGTGTCAGAGACAGATCCCTGC...GTTTCTGCATGTGGCCAGCATTATAGAATGCTCCAGGCCAGAGAATGGGATTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
3UTR-3UTR TCA 90 bp GTCTTGAACTCTTGGGCTCCAGCAATCCTGGGCTTCCCAAAGTGTTGGGATTACCTCCATCCAGTTAGGTaGCACTCCTTGCTGATTTCT +
Preference number: 2 (lower is better)
Translates to: VLNSWAPAILGFPKCWDYLHPVR*HSLLIS
Trigger: AGAAATCAGCAAGGAGTGTCACCTAACTGGATGGAG...GTAATCCCAACACTTTGGGAAGCCCAGGATTGCTGGAGCCCAAGAGTTCAAGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000645100.1
ENST00000647136.1
3UTR-3UTR GCA 90 bp GAACTATTTGGCCAGGGAATCCTACCAGTGAGTGATTTCCCTGGGGGCAGTAACTCACATGGGCTGGAGTaGAGTAGTGTAATCTCAGCT +
Preference number: 2 (lower is better)
Translates to: ELFGQGILPVSDFPGGSNSHGLE*SSVISA
Trigger: AGCTGAGATTACACTACTGCACTCCAGCCCATGTGA...GTTACTGCCCCCAGGGAAATCACTCACTGGTAGGATTCCCTGGCCAAATAGTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
3UTR-3UTR CCA 90 bp CCTGGCATCATGGGAGCAATCCCATTCTCTGGCCTGGAGCATTCTATAATGCTGCAATGCCAGTTGCTATaGGCACAGAGTTGGAGAGAA +
Preference number: 2 (lower is better)
Translates to: PGIMGAIPFSGLEHSIMLQCQLL*AQSWRE
Trigger: TTCTCTCCAACTCTGTGCCCATAGCAACTGGCATTG...CAGCATTATAGAATGCTCCAGGCCAGAGAATGGGATTGCTCCCATGATGCCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
3UTR-3UTR CCA 90 bp AAGTGGCAATGTCTTCGGTGTTTTACAAAAGGCGCTAGCTATCTAAGGCATCTGCCGGTCTTGAACTCTTaGGCTCCAGCAATCCTGGGC +
Preference number: 2 (lower is better)
Translates to: KWQCLRCFTKGASYLRHLPVLNS*APAILG
Trigger: GCCCAGGATTGCTGGAGCCCAAGAGTTCAAGACCGG...CAGATGCCTTAGATAGCTAGCGCCTTTTGTAAAACACCGAAGACATTGCCACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000510784.8
ENST00000540914.5
3UTR CAA 90 bp CAGCATATAATTTTTCCTCTGAGGACTGAGGAAAGAATGAATGCCTaGGGCATGACAAGAAGCAGCCCTGCTTCCTCTGGAGCTCTGCCT +
Preference number: 2 (lower is better)
Translates to: QHIIFPLRTEERMNA*GMTRSSPASSGALP
Trigger: AGGCAGAGCTCCAGAGGAAGCAGGGCTGCTTCTTGTCATGCCCAAGGCATTCATTCTTTCCTCAGTCCTCAGAGGAAAAATTATATGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000645100.1
ENST00000647136.1
3UTR-3UTR TCA 90 bp ATGTTTGAACTATTTGGCCAGGGAATCCTACCAGTGAGTGATTTCCCTGGGGGCCCATTAGGATTTCTCTaGCTTCTAGGTTCCTCCACC +
Preference number: 2 (lower is better)
Translates to: MFELFGQGILPVSDFPGGPLGFL*LLGSST
Trigger: GGTGGAGGAACCTAGAAGTCAGAGAAATCCTAATGG...GCCCCCAGGGAAATCACTCACTGGTAGGATTCCCTGGCCAAATAGTTCAAACAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
3UTR-3UTR TCA 90 bp GGGACTGGTTGCAGAAGAATCCAGAGGGAAGTCAGCAGGTTGAAGAATAGGAAAAGATTGGCCATGAGTTaGTCACTGAGGAGGTTGAGG +
Preference number: 2 (lower is better)
Translates to: GTGCRRIQREVSRLKNRKRLAMS*SLRRLR
Trigger: CCTCAACCTCCTCAGTGATCAACTCATGGCCAATCT...TTTCCTATTCTTCAACCTGCTGACTTCCCTCTGGATTCTTCTGCAACCAGTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
3UTR-3UTR TCA 90 bp AAATGGCACAATATCTGGGACTGGTTGCAGAAGAATCCAGAGGGAAGTCAGCAGAGATTGGCCATGAGTTaGTCACTGAGGAGGTTGAGG +
Preference number: 2 (lower is better)
Translates to: KWHNIWDWLQKNPEGSQQRLAMS*SLRRLR
Trigger: CCTCAACCTCCTCAGTGATCAACTCATGGCCAATCT...CTGCTGACTTCCCTCTGGATTCTTCTGCAACCAGTCCCAGATATTGTGCCATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
3UTR-3UTR TCA 90 bp GGGGTGGGTCGAATGGGACAAATTCTGCAAGTTAGAAGCACTAAATGTCCTCCAGCAGGGATCTGTCTCTaGCACTCAAGATGGCACAAA +
Preference number: 2 (lower is better)
Translates to: GVGRMGQILQVRSTKCPPAGICL*HSRWHK
Trigger: TTTGTGCCATCTTGAGTGTCAGAGACAGATCCCTGC...TGGAGGACATTTAGTGCTTCTAACTTGCAGAATTTGTCCCATTCGACCCACCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
3UTR-3UTR GCA 90 bp ATGTTTGAACTATTTGGCCAGGGAATCCTACCAGTGAGTGATTTCCCTGGGGGCTCACATGGGCTGGAGTaGAGTAGTGTAATCTCAGCT +
Preference number: 2 (lower is better)
Translates to: MFELFGQGILPVSDFPGGSHGLE*SSVISA
Trigger: AGCTGAGATTACACTACTGCACTCCAGCCCATGTGA...GCCCCCAGGGAAATCACTCACTGGTAGGATTCCCTGGCCAAATAGTTCAAACAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
3UTR-3UTR GCA 90 bp AGAATGAATGCCTTGGGCATGACAAGAAGCAGCCCTGCTTCCTCTGGAGCTCTGTTACAAGCAAAACAATaGCAGTTGCTATGGGCACAG +
Preference number: 2 (lower is better)
Translates to: RMNALGMTRSSPASSGALLQAKQ*QLLWAQ
Trigger: CTGTGCCCATAGCAACTGGCATTGTTTTGCTTGTAA...CAGAGCTCCAGAGGAAGCAGGGCTGCTTCTTGTCATGCCCAAGGCATTCATTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000645100.1
ENST00000647136.1
3UTR-3UTR TCA 90 bp AAAATGGCACAATATCTGGGACTGGTTGCAGAAGAATCCAGAGGGAAGTCAGCAAGATTGGCCATGAGTTaGTCACTGAGGAGGTTGAGG +
Preference number: 2 (lower is better)
Translates to: KMAQYLGLVAEESRGKSARLAMS*SLRRLR
Trigger: CCTCAACCTCCTCAGTGATCAACTCATGGCCAATCT...TGCTGACTTCCCTCTGGATTCTTCTGCAACCAGTCCCAGATATTGTGCCATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
3UTR-3UTR TCA 90 bp GTCTTGAACTCTTGGGCTCCAGCAATCCTGGGCTTCCCAAAGTGTTGGGATTACTTTTCCTCTGAGGACTaGGGAAAGAATGAATGCCTT +
Preference number: 2 (lower is better)
Translates to: VLNSWAPAILGFPKCWDYFSSED*GKNECL
Trigger: AAGGCATTCATTCTTTCCTCAGTCCTCAGAGGAAAA...GTAATCCCAACACTTTGGGAAGCCCAGGATTGCTGGAGCCCAAGAGTTCAAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000645100.1
ENST00000647136.1
3UTR-3UTR CCA 90 bp GCAATCCCATTCTCTGGCCTGGAGCATTCTATAATGCTGGCCACATGCAGAAACTGGCACAAAAGCACATaGGAAAACGTCTTTCGGTCT +
Preference number: 2 (lower is better)
Translates to: AIPFSGLEHSIMLATCRNWHKST*ENVFRS
Trigger: AGACCGAAAGACGTTTTCCCATGTGCTTTTGTGCCA...GTTTCTGCATGTGGCCAGCATTATAGAATGCTCCAGGCCAGAGAATGGGATTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
3UTR-3UTR TCA 90 bp GATAAGTTCACAGTTGAAAGAACCATTTGCCAGAAGCCTGGCAAACAATTTGCAAACCTCTGCCTCAAGTaGTCCTCCCACCTCAGACTC +
Preference number: 2 (lower is better)
Translates to: DKFTVERTICQKPGKQFANLCLK*SSHLRL
Trigger: GAGTCTGAGGTGGGAGGATCACTTGAGGCAGAGGTT...TGCAAATTGTTTGCCAGGCTTCTGGCAAATGGTTCTTTCAACTGTGAACTTATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
3UTR-3UTR TCA 90 bp ATAAAATGGCACAATATCTGGGACTGGTTGCAGAAGAATCCAGAGGGAAGTCAGAGATTGGCCATGAGTTaGTCACTGAGGAGGTTGAGG +
Preference number: 2 (lower is better)
Translates to: IKWHNIWDWLQKNPEGSQRLAMS*SLRRLR
Trigger: CCTCAACCTCCTCAGTGATCAACTCATGGCCAATCT...CTGACTTCCCTCTGGATTCTTCTGCAACCAGTCCCAGATATTGTGCCATTTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
3UTR-3UTR TCA 90 bp GATAAAATGGCACAATATCTGGGACTGGTTGCAGAAGAATCCAGAGGGAAGTCAGCAGGGATCTGTCTCTaGCACTCAAGATGGCACAAA +
Preference number: 2 (lower is better)
Translates to: DKMAQYLGLVAEESRGKSAGICL*HSRWHK
Trigger: TTTGTGCCATCTTGAGTGTCAGAGACAGATCCCTGC...TGACTTCCCTCTGGATTCTTCTGCAACCAGTCCCAGATATTGTGCCATTTTATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510784.8
ENST00000540914.5
3UTR-3UTR GCA 90 bp GAACTATTTGGCCAGGGAATCCTACCAGTGAGTGATTTCCCTGGGGGCAGTAACACGACCGAGAAAAACTaGAAGGCATATGATGTTTGT +
Preference number: 2 (lower is better)
Translates to: ELFGQGILPVSDFPGGSNTTEKN*KAYDVC
Trigger: ACAAACATCATATGCCTTGCAGTTTTTCTCGGTCGT...GTTACTGCCCCCAGGGAAATCACTCACTGGTAGGATTCCCTGGCCAAATAGTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
3UTR-3UTR GCA 90 bp CTCCACTCCTACTCCATTAGGATTTCTCTGACTTCTAGGTTCCTCCACCTCAAATCACATGGGCTGGAGTaGAGTAGTGTAATCTCAGCT +
Preference number: 2 (lower is better)
Translates to: LHSYSIRISLTSRFLHLKSHGLE*SSVISA
Trigger: AGCTGAGATTACACTACTGCACTCCAGCCCATGTGA...TTTGAGGTGGAGGAACCTAGAAGTCAGAGAAATCCTAATGGAGTAGGAGTGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
3UTR-3UTR CCA 90 bp ATTCAAGAGGATGCTGGGGTGGGTCGAATGGGACAAATTCTGCAAGTTAGAAGCTGGCACAAAAGCACATaGGAAAACGTCTTTCGGTCT +
Preference number: 2 (lower is better)
Translates to: IQEDAGVGRMGQILQVRSWHKST*ENVFRS
Trigger: AGACCGAAAGACGTTTTCCCATGTGCTTTTGTGCCA...GCTTCTAACTTGCAGAATTTGTCCCATTCGACCCACCCCAGCATCCTCTTGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
3UTR-3UTR TCA 90 bp ATTACACTCACATATATTGTTTTGATACCTTGGCATACCCCACCTTGTACACTCAGGGAATCCTACCAGTaGGTGATTTCCCTGGGGGCA +
Preference number: 2 (lower is better)
Translates to: ITLTYIVLIPWHTPPCTLRESYQ*VISLGA
Trigger: TGCCCCCAGGGAAATCACTCACTGGTAGGATTCCCT...GAGTGTACAAGGTGGGGTATGCCAAGGTATCAAAACAATATATGTGAGTGTAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
3UTR-3UTR GCA 90 bp GATATGTACACGATAAGTTCACAGTTGAAAGAACCATTTGCCAGAAGCCTGGCAGCAATTATGGCTCACTaGAGCCTGAATCTTCTGGGC +
Preference number: 2 (lower is better)
Translates to: DMYTISSQLKEPFARSLAAIMAH*SLNLLG
Trigger: GCCCAGAAGATTCAGGCTGCAGTGAGCCATAATTGC...TGCCAGGCTTCTGGCAAATGGTTCTTTCAACTGTGAACTTATCGTGTACATATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
3UTR-3UTR GCA 90 bp GATAAGTTCACAGTTGAAAGAACCATTTGCCAGAAGCCTGGCAAACAATTTGCATCACCCAGTCTGGAGTaGAGTGGGGCAATTATGGCT +
Preference number: 2 (lower is better)
Translates to: DKFTVERTICQKPGKQFASPSLE*SGAIMA
Trigger: AGCCATAATTGCCCCACTGCACTCCAGACTGGGTGA...TGCAAATTGTTTGCCAGGCTTCTGGCAAATGGTTCTTTCAACTGTGAACTTATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
3UTR-3UTR GCA 90 bp TCTGGCCTGGAGCATTCTATAATGCTGGCCACATGCAGAAACATTACAAGCAAAAAATATTCAAGAGGATaGTGGGGTGGGTCGAATGGG +
Preference number: 2 (lower is better)
Translates to: SGLEHSIMLATCRNITSKKYSRG*WGGSNG
Trigger: CCCATTCGACCCACCCCAGCATCCTCTTGAATATTT...TTTGCTTGTAATGTTTCTGCATGTGGCCAGCATTATAGAATGCTCCAGGCCAGA
46% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
3UTR-3UTR TCA 90 bp ATGTTTGAACTATTTGGCCAGGGAATCCTACCAGTGAGTGATTTCCCTGGGGGCGATGGACTCTTTCACTaGGTATTATTAGACACAATC +
Preference number: 2 (lower is better)
Translates to: MFELFGQGILPVSDFPGGDGLFH*VLLDTI
Trigger: GATTGTGTCTAATAATACTCAGTGAAAGAGTCCATC...GCCCCCAGGGAAATCACTCACTGGTAGGATTCCCTGGCCAAATAGTTCAAACAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
3UTR-3UTR TCA 90 bp GATAAGTTCACAGTTGAAAGAACCATTTGCCAGAAGCCTGGCAAACAATTTGCAGGGACTACTCAACCCTaGGAACACGACCGAGAAAAA +
Preference number: 2 (lower is better)
Translates to: DKFTVERTICQKPGKQFAGTTQP*EHDREK
Trigger: TTTTTCTCGGTCGTGTTCTCAGGGTTGAGTAGTCCC...TGCAAATTGTTTGCCAGGCTTCTGGCAAATGGTTCTTTCAACTGTGAACTTATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
3UTR-3UTR TCA 90 bp GATATGTACACGATAAGTTCACAGTTGAAAGAACCATTTGCCAGAAGCCTGGCACCATTAGGATTTCTCTaGCTTCTAGGTTCCTCCACC +
Preference number: 2 (lower is better)
Translates to: DMYTISSQLKEPFARSLAPLGFL*LLGSST
Trigger: GGTGGAGGAACCTAGAAGTCAGAGAAATCCTAATGG...TGCCAGGCTTCTGGCAAATGGTTCTTTCAACTGTGAACTTATCGTGTACATATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
3UTR-3UTR TCA 90 bp TCCAAATATTCAAGAGGATGCTGGGGTGGGTCGAATGGGACAAATTCTGCAAGTGGGAAGTCAGCAGGTTaGAGAATAGGAAACAAGATT +
Preference number: 2 (lower is better)
Translates to: SKYSRGCWGGSNGTNSASGKSAG*RIGNKI
Trigger: AATCTTGTTTCCTATTCTTCAACCTGCTGACTTCCC...ACTTGCAGAATTTGTCCCATTCGACCCACCCCAGCATCCTCTTGAATATTTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510784.8
ENST00000540914.5
3UTR-3UTR CCA 90 bp ATTACACTCACATATATTGTTTTGATACCTTGGCATACCCCACCTTGTACACTCCAGTCTGGAGTGCAGTaGGGCAATTATGGCTCACTG +
Preference number: 2 (lower is better)
Translates to: ITLTYIVLIPWHTPPCTLQSGVQ*GNYGSL
Trigger: CAGTGAGCCATAATTGCCCCACTGCACTCCAGACTG...GAGTGTACAAGGTGGGGTATGCCAAGGTATCAAAACAATATATGTGAGTGTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
3UTR-3UTR CCA 90 bp ATGTTTGAACTATTTGGCCAGGGAATCCTACCAGTGAGTGATTTCCCTGGGGGCAGACTCCAGAGTAGCTaGGAGCACATAAAATTAAAA +
Preference number: 2 (lower is better)
Translates to: MFELFGQGILPVSDFPGGRLQSS*EHIKLK
Trigger: TTTTAATTTTATGTGCTCCCAGCTACTCTGGAGTCT...GCCCCCAGGGAAATCACTCACTGGTAGGATTCCCTGGCCAAATAGTTCAAACAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
3UTR-3UTR CCA 90 bp ATAAAATGGCACAATATCTGGGACTGGTTGCAGAAGAATCCAGAGGGAAGTCAGTGGCACAAAAGCACATaGGAAAACGTCTTTCGGTCT +
Preference number: 2 (lower is better)
Translates to: IKWHNIWDWLQKNPEGSQWHKST*ENVFRS
Trigger: AGACCGAAAGACGTTTTCCCATGTGCTTTTGTGCCA...CTGACTTCCCTCTGGATTCTTCTGCAACCAGTCCCAGATATTGTGCCATTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000510784.8
ENST00000540914.5
3UTR-3UTR CCA 90 bp ATATTCAAGAGGATGCTGGGGTGGGTCGAATGGGACAAATTCTGCAAGTTAGAATGGCACAAAAGCACATaGGAAAACGTCTTTCGGTCT +
Preference number: 2 (lower is better)
Translates to: IFKRMLGWVEWDKFCKLEWHKST*ENVFRS
Trigger: AGACCGAAAGACGTTTTCCCATGTGCTTTTGTGCCA...TTCTAACTTGCAGAATTTGTCCCATTCGACCCACCCCAGCATCCTCTTGAATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
3UTR-3UTR CCA 90 bp GAGCATTCTATAATGCTGGCCACATGCAGAAACATTACAAGCAAAACAATGCCAAAGAGGATGCTGGGGTaGGTCGAATGGGACAAATTC +
Preference number: 2 (lower is better)
Translates to: EHSIMLATCRNITSKTMPKRMLG*VEWDKF
Trigger: GAATTTGTCCCATTCGACCCACCCCAGCATCCTCTT...TGGCATTGTTTTGCTTGTAATGTTTCTGCATGTGGCCAGCATTATAGAATGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
3UTR-3UTR CCA 90 bp GCATTCTATAATGCTGGCCACATGCAGAAACATTACAAGCAAAACAATGCCAGTAAGAGGATGCTGGGGTaGGTCGAATGGGACAAATTC +
Preference number: 2 (lower is better)
Translates to: AFYNAGHMQKHYKQNNASKRMLG*VEWDKF
Trigger: GAATTTGTCCCATTCGACCCACCCCAGCATCCTCTT...ACTGGCATTGTTTTGCTTGTAATGTTTCTGCATGTGGCCAGCATTATAGAATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
3UTR-3UTR TCA 90 bp TTTCAACCATTTAACATAAGCTATAGGCTATACCTCCTAACTACAGACTGTACAAACCTCTGCCTCAAGTaGTCCTCCCACCTCAGACTC +
Preference number: 2 (lower is better)
Translates to: FQPFNISYRLYLLTTDCTNLCLK*SSHLRL
Trigger: GAGTCTGAGGTGGGAGGATCACTTGAGGCAGAGGTT...TGTACAGTCTGTAGTTAGGAGGTATAGCCTATAGCTTATGTTAAATGGTTGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
3UTR-3UTR TCA 90 bp CTCCACTCCTACTCCATTAGGATTTCTCTGACTTCTAGGTTCCTCCACCTCAAAAGCATCACAGGTTTGTaGATCTACAGCTTTTGGTTT +
Preference number: 2 (lower is better)
Translates to: LHSYSIRISLTSRFLHLKSITGL*IYSFWF
Trigger: AAACCAAAAGCTGTAGATTCACAAACCTGTGATGCT...TTTGAGGTGGAGGAACCTAGAAGTCAGAGAAATCCTAATGGAGTAGGAGTGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
3UTR-3UTR TCA 90 bp ATATACAGATATGTACACGATAAGTTCACAGTTGAAAGAACCATTTGCCAGAAGAGGGAATCCTACCAGTaGGTGATTTCCCTGGGGGCA +
Preference number: 2 (lower is better)
Translates to: IYRYVHDKFTVERTICQKRESYQ*VISLGA
Trigger: TGCCCCCAGGGAAATCACTCACTGGTAGGATTCCCT...CTTCTGGCAAATGGTTCTTTCAACTGTGAACTTATCGTGTACATATCTGTATAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
3UTR-3UTR TCA 90 bp GATATGTACACGATAAGTTCACAGTTGAAAGAACCATTTGCCAGAAGCCTGGCAATGGGACCTGATGTTTaGACTATTTGGCCAGGGAAT +
Preference number: 2 (lower is better)
Translates to: DMYTISSQLKEPFARSLAMGPDV*TIWPGN
Trigger: ATTCCCTGGCCAAATAGTTCAAACATCAGGTCCCAT...TGCCAGGCTTCTGGCAAATGGTTCTTTCAACTGTGAACTTATCGTGTACATATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
3UTR-3UTR TCA 90 bp GAGCATTCTATAATGCTGGCCACATGCAGAAACATTACAAGCAAAACAATGCCACTCCATCCAGTTAGGTaGCACTCCTTGCTGATTTCT +
Preference number: 2 (lower is better)
Translates to: EHSIMLATCRNITSKTMPLHPVR*HSLLIS
Trigger: AGAAATCAGCAAGGAGTGTCACCTAACTGGATGGAG...TGGCATTGTTTTGCTTGTAATGTTTCTGCATGTGGCCAGCATTATAGAATGCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
3UTR-3UTR GCA 90 bp ATTACACTCACATATATTGTTTTGATACCTTGGCATACCCCACCTTGTACACTCGCAATTATGGCTCACTaGAGCCTGAATCTTCTGGGC +
Preference number: 2 (lower is better)
Translates to: ITLTYIVLIPWHTPPCTLAIMAH*SLNLLG
Trigger: GCCCAGAAGATTCAGGCTGCAGTGAGCCATAATTGC...GAGTGTACAAGGTGGGGTATGCCAAGGTATCAAAACAATATATGTGAGTGTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
3UTR-3UTR GCA 90 bp CTCCACTCCTACTCCATTAGGATTTCTCTGACTTCTAGGTTCCTCCACCTCAAAACGACCGAGAAAAACTaGAAGGCATATGATGTTTGT +
Preference number: 2 (lower is better)
Translates to: LHSYSIRISLTSRFLHLKTTEKN*KAYDVC
Trigger: ACAAACATCATATGCCTTGCAGTTTTTCTCGGTCGT...TTTGAGGTGGAGGAACCTAGAAGTCAGAGAAATCCTAATGGAGTAGGAGTGGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
3UTR-3UTR GCA 90 bp GAGCATTCTATAATGCTGGCCACATGCAGAAACATTACAAGCAAAACAATGCCAAAATATTCAAGAGGATaGTGGGGTGGGTCGAATGGG +
Preference number: 2 (lower is better)
Translates to: EHSIMLATCRNITSKTMPKYSRG*WGGSNG
Trigger: CCCATTCGACCCACCCCAGCATCCTCTTGAATATTT...TGGCATTGTTTTGCTTGTAATGTTTCTGCATGTGGCCAGCATTATAGAATGCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
3UTR-3UTR TCA 90 bp GATAAGTTCACAGTTGAAAGAACCATTTGCCAGAAGCCTGGCAAACAATTTGCAATGGGACCTGATGTTTaGACTATTTGGCCAGGGAAT +
Preference number: 2 (lower is better)
Translates to: DKFTVERTICQKPGKQFAMGPDV*TIWPGN
Trigger: ATTCCCTGGCCAAATAGTTCAAACATCAGGTCCCAT...TGCAAATTGTTTGCCAGGCTTCTGGCAAATGGTTCTTTCAACTGTGAACTTATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
3UTR-3UTR CCA 90 bp ATATACAGATATGTACACGATAAGTTCACAGTTGAAAGAACCATTTGCCAGAAGCAGTCTGGAGTGCAGTaGGGCAATTATGGCTCACTG +
Preference number: 2 (lower is better)
Translates to: IYRYVHDKFTVERTICQKQSGVQ*GNYGSL
Trigger: CAGTGAGCCATAATTGCCCCACTGCACTCCAGACTG...CTTCTGGCAAATGGTTCTTTCAACTGTGAACTTATCGTGTACATATCTGTATAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
3UTR-3UTR CCA 90 bp CTCCACTCCTACTCCATTAGGATTTCTCTGACTTCTAGGTTCCTCCACCTCAAAAGACTCCAGAGTAGCTaGGAGCACATAAAATTAAAA +
Preference number: 2 (lower is better)
Translates to: LHSYSIRISLTSRFLHLKRLQSS*EHIKLK
Trigger: TTTTAATTTTATGTGCTCCCAGCTACTCTGGAGTCT...TTTGAGGTGGAGGAACCTAGAAGTCAGAGAAATCCTAATGGAGTAGGAGTGGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
3UTR-3UTR TCA 90 bp TTTCAACCATTTAACATAAGCTATAGGCTATACCTCCTAACTACAGACTGTACAGGGACTACTCAACCCTaGGAACACGACCGAGAAAAA +
Preference number: 2 (lower is better)
Translates to: FQPFNISYRLYLLTTDCTGTTQP*EHDREK
Trigger: TTTTTCTCGGTCGTGTTCTCAGGGTTGAGTAGTCCC...TGTACAGTCTGTAGTTAGGAGGTATAGCCTATAGCTTATGTTAAATGGTTGAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
3UTR-3UTR TCA 90 bp GATAAGTTCACAGTTGAAAGAACCATTTGCCAGAAGCCTGGCAAACAATTTGCAAGCAATAATGGGACCTaGTGTTTGAACTATTTGGCC +
Preference number: 2 (lower is better)
Translates to: DKFTVERTICQKPGKQFASNNGT*CLNYLA
Trigger: GGCCAAATAGTTCAAACATCAGGTCCCATTATTGCT...TGCAAATTGTTTGCCAGGCTTCTGGCAAATGGTTCTTTCAACTGTGAACTTATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
3UTR-3UTR GCA 90 bp GATATGTACACGATAAGTTCACAGTTGAAAGAACCATTTGCCAGAAGCCTGGCAACGACCGAGAAAAACTaGAAGGCATATGATGTTTGT +
Preference number: 2 (lower is better)
Translates to: DMYTISSQLKEPFARSLATTEKN*KAYDVC
Trigger: ACAAACATCATATGCCTTGCAGTTTTTCTCGGTCGT...TGCCAGGCTTCTGGCAAATGGTTCTTTCAACTGTGAACTTATCGTGTACATATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
3UTR-3UTR TCA 90 bp GATAAGTTCACAGTTGAAAGAACCATTTGCCAGAAGCCTGGCAAACAATTTGCAAGCATCACAGGTTTGTaGATCTACAGCTTTTGGTTT +
Preference number: 2 (lower is better)
Translates to: DKFTVERTICQKPGKQFASITGL*IYSFWF
Trigger: AAACCAAAAGCTGTAGATTCACAAACCTGTGATGCT...TGCAAATTGTTTGCCAGGCTTCTGGCAAATGGTTCTTTCAACTGTGAACTTATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
3UTR-3UTR TCA 90 bp TTTCAACCATTTAACATAAGCTATAGGCTATACCTCCTAACTACAGACTGTACACCATTAGGATTTCTCTaGCTTCTAGGTTCCTCCACC +
Preference number: 2 (lower is better)
Translates to: FQPFNISYRLYLLTTDCTPLGFL*LLGSST
Trigger: GGTGGAGGAACCTAGAAGTCAGAGAAATCCTAATGG...TGTACAGTCTGTAGTTAGGAGGTATAGCCTATAGCTTATGTTAAATGGTTGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
3UTR-3UTR TCA 90 bp ATTACACTCACATATATTGTTTTGATACCTTGGCATACCCCACCTTGTACACTCAGCAATAATGGGACCTaGTGTTTGAACTATTTGGCC +
Preference number: 2 (lower is better)
Translates to: ITLTYIVLIPWHTPPCTLSNNGT*CLNYLA
Trigger: GGCCAAATAGTTCAAACATCAGGTCCCATTATTGCT...GAGTGTACAAGGTGGGGTATGCCAAGGTATCAAAACAATATATGTGAGTGTAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
3UTR-3UTR TCA 90 bp GATAAGTTCACAGTTGAAAGAACCATTTGCCAGAAGCCTGGCAAACAATTTGCAGATGGACTCTTTCACTaGGTATTATTAGACACAATC +
Preference number: 2 (lower is better)
Translates to: DKFTVERTICQKPGKQFADGLFH*VLLDTI
Trigger: GATTGTGTCTAATAATACTCAGTGAAAGAGTCCATC...TGCAAATTGTTTGCCAGGCTTCTGGCAAATGGTTCTTTCAACTGTGAACTTATC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
3UTR-3UTR TCA 90 bp TTTCAACCATTTAACATAAGCTATAGGCTATACCTCCTAACTACAGACTGTACAATGGGACCTGATGTTTaGACTATTTGGCCAGGGAAT +
Preference number: 2 (lower is better)
Translates to: FQPFNISYRLYLLTTDCTMGPDV*TIWPGN
Trigger: ATTCCCTGGCCAAATAGTTCAAACATCAGGTCCCAT...TGTACAGTCTGTAGTTAGGAGGTATAGCCTATAGCTTATGTTAAATGGTTGAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
3UTR-3UTR GCA 90 bp ATTACACTCACATATATTGTTTTGATACCTTGGCATACCCCACCTTGTACACTCACGACCGAGAAAAACTaGAAGGCATATGATGTTTGT +
Preference number: 2 (lower is better)
Translates to: ITLTYIVLIPWHTPPCTLTTEKN*KAYDVC
Trigger: ACAAACATCATATGCCTTGCAGTTTTTCTCGGTCGT...GAGTGTACAAGGTGGGGTATGCCAAGGTATCAAAACAATATATGTGAGTGTAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
3UTR-3UTR CCA 90 bp GATAAGTTCACAGTTGAAAGAACCATTTGCCAGAAGCCTGGCAAACAATTTGCAAGACTCCAGAGTAGCTaGGAGCACATAAAATTAAAA +
Preference number: 2 (lower is better)
Translates to: DKFTVERTICQKPGKQFARLQSS*EHIKLK
Trigger: TTTTAATTTTATGTGCTCCCAGCTACTCTGGAGTCT...TGCAAATTGTTTGCCAGGCTTCTGGCAAATGGTTCTTTCAACTGTGAACTTATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
3UTR-3UTR TCA 90 bp ATTACACTCACATATATTGTTTTGATACCTTGGCATACCCCACCTTGTACACTCGATGGACTCTTTCACTaGGTATTATTAGACACAATC +
Preference number: 2 (lower is better)
Translates to: ITLTYIVLIPWHTPPCTLDGLFH*VLLDTI
Trigger: GATTGTGTCTAATAATACTCAGTGAAAGAGTCCATC...GAGTGTACAAGGTGGGGTATGCCAAGGTATCAAAACAATATATGTGAGTGTAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
3UTR-3UTR TCA 90 bp TTTCAACCATTTAACATAAGCTATAGGCTATACCTCCTAACTACAGACTGTACAAGCAATAATGGGACCTaGTGTTTGAACTATTTGGCC +
Preference number: 2 (lower is better)
Translates to: FQPFNISYRLYLLTTDCTSNNGT*CLNYLA
Trigger: GGCCAAATAGTTCAAACATCAGGTCCCATTATTGCT...TGTACAGTCTGTAGTTAGGAGGTATAGCCTATAGCTTATGTTAAATGGTTGAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
3UTR-3UTR CCA 90 bp TTTCAACCATTTAACATAAGCTATAGGCTATACCTCCTAACTACAGACTGTACACATTTGCCAGAAGCCTaGCAAACAATTTGCACTTTG +
Preference number: 2 (lower is better)
Translates to: FQPFNISYRLYLLTTDCTHLPEA*QTICTL
Trigger: CAAAGTGCAAATTGTTTGCCAGGCTTCTGGCAAATG...TGTACAGTCTGTAGTTAGGAGGTATAGCCTATAGCTTATGTTAAATGGTTGAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
3UTR-3UTR TCA 90 bp ATATACAGATATGTACACGATAAGTTCACAGTTGAAAGAACCATTTGCCAGAAGAAACTGCAAGGCATATaGTGTTTGTCGAAGTATCAC +
Preference number: 2 (lower is better)
Translates to: IYRYVHDKFTVERTICQKKLQGI*CLSKYH
Trigger: GTGATACTTCGACAAACATCATATGCCTTGCAGTTT...CTTCTGGCAAATGGTTCTTTCAACTGTGAACTTATCGTGTACATATCTGTATAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
3UTR-3UTR TCA 90 bp TTTCAACCATTTAACATAAGCTATAGGCTATACCTCCTAACTACAGACTGTACATCACATATATTGTTTTaGTACCTTGGCATACCCCAC +
Preference number: 2 (lower is better)
Translates to: FQPFNISYRLYLLTTDCTSHILF*YLGIPH
Trigger: GTGGGGTATGCCAAGGTATCAAAACAATATATGTGA...TGTACAGTCTGTAGTTAGGAGGTATAGCCTATAGCTTATGTTAAATGGTTGAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
3UTR-3UTR TCA 90 bp ATATACAGATATGTACACGATAAGTTCACAGTTGAAAGAACCATTTGCCAGAAGTCACATATATTGTTTTaGTACCTTGGCATACCCCAC +
Preference number: 2 (lower is better)
Translates to: IYRYVHDKFTVERTICQKSHILF*YLGIPH
Trigger: GTGGGGTATGCCAAGGTATCAAAACAATATATGTGA...CTTCTGGCAAATGGTTCTTTCAACTGTGAACTTATCGTGTACATATCTGTATAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
3UTR-3UTR TCA 90 bp TTTCAACCATTTAACATAAGCTATAGGCTATACCTCCTAACTACAGACTGTACAGATGGACTCTTTCACTaGGTATTATTAGACACAATC +
Preference number: 2 (lower is better)
Translates to: FQPFNISYRLYLLTTDCTDGLFH*VLLDTI
Trigger: GATTGTGTCTAATAATACTCAGTGAAAGAGTCCATC...TGTACAGTCTGTAGTTAGGAGGTATAGCCTATAGCTTATGTTAAATGGTTGAAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
3UTR-3UTR CAA 90 bp CAGCCCTGCTTCCTCTGGAGCTCTGCCTCAAAGGGAACAAGTCCCACCACTTCCAAGGTAGGAAGGGCCTaGCAGGGATCTGTCTCTGAC +
Preference number: 3 (lower is better)
Translates to: QPCFLWSSASKGTSPTTSKVGRA*QGSVSD
Trigger: GTCAGAGACAGATCCCTGCAAGGCCCTTCCTACCTT...GGAAGTGGTGGGACTTGTTCCCTTTGAGGCAGAGCTCCAGAGGAAGCAGGGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
3UTR CCA 72 bp AAGTCCCACCACTTCCCTGACCAGGCCCTGGCATCATaGGAGCAATCCCATTCTCTGGCCTGGAGCATTCTA +
Preference number: 3 (lower is better)
Translates to: KSHHFPDQALAS*EQSHSLAWSIL
Trigger: TAGAATGCTCCAGGCCAGAGAATGGGATTGCTCCCATGATGCCAGGGCCTGGTCAGGGAAGTGGTGGGACTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
3UTR CCA 72 bp TGCCTTGGGCATGACAAGAAGCAGCCCTGCTTCCTCTaGAGCTCTGCCTCAAAGGGAACAAGTCCCACCACT +
Preference number: 3 (lower is better)
Translates to: CLGHDKKQPCFL*SSASKGTSPTT
Trigger: AGTGGTGGGACTTGTTCCCTTTGAGGCAGAGCTCCAGAGGAAGCAGGGCTGCTTCTTGTCATGCCCAAGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000645100.1
ENST00000647136.1
3UTR-3UTR CAA 90 bp GCCTCAAAGGGAACAAGTCCCACCACTTCCCTGACCAGGCCCTGGCATCATGGGAAGATTGGCCATGAGTaGATCACTGAGGAGGTTGAG +
Preference number: 3 (lower is better)
Translates to: ASKGTSPTTSLTRPWHHGKIGHE*ITEEVE
Trigger: CTCAACCTCCTCAGTGATCAACTCATGGCCAATCTT...CCCATGATGCCAGGGCCTGGTCAGGGAAGTGGTGGGACTTGTTCCCTTTGAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510784.8
ENST00000540914.5
3UTR-3UTR CAA 90 bp CAGCCCTGCTTCCTCTGGAGCTCTGCCTCAAAGGGAACAAGTCCCACCACTTCCGCAAAACAATGCCAGTaGCTATGGGCACAGAGTTGG +
Preference number: 3 (lower is better)
Translates to: QPCFLWSSASKGTSPTTSAKQCQ*LWAQSW
Trigger: CCAACTCTGTGCCCATAGCAACTGGCATTGTTTTGC...GGAAGTGGTGGGACTTGTTCCCTTTGAGGCAGAGCTCCAGAGGAAGCAGGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
3UTR CCA 72 bp ACCAGGCCCTGGCATCATGGGAGCAATCCCATTCTCTaGCCTGGAGCATTCTATAATGCTGGCCACATGCAG +
Preference number: 3 (lower is better)
Translates to: TRPWHHGSNPIL*PGAFYNAGHMQ
Trigger: CTGCATGTGGCCAGCATTATAGAATGCTCCAGGCCAGAGAATGGGATTGCTCCCATGATGCCAGGGCCTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
3UTR-3UTR CAA 90 bp AACAAGTCCCACCACTTCCCTGACCAGGCCCTGGCATCATGGGAGCAATCCCATGCAAAACAATGCCAGTaGCTATGGGCACAGAGTTGG +
Preference number: 3 (lower is better)
Translates to: NKSHHFPDQALASWEQSHAKQCQ*LWAQSW
Trigger: CCAACTCTGTGCCCATAGCAACTGGCATTGTTTTGC...ATGGGATTGCTCCCATGATGCCAGGGCCTGGTCAGGGAAGTGGTGGGACTTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
3UTR-3UTR CAA 90 bp CAAGAAGCAGCCCTGCTTCCTCTGGAGCTCTGCCTCAAAGGGAACAAGTCCCACGCAAAACAATGCCAGTaGCTATGGGCACAGAGTTGG +
Preference number: 3 (lower is better)
Translates to: QEAALLPLELCLKGNKSHAKQCQ*LWAQSW
Trigger: CCAACTCTGTGCCCATAGCAACTGGCATTGTTTTGC...GTGGGACTTGTTCCCTTTGAGGCAGAGCTCCAGAGGAAGCAGGGCTGCTTCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
3UTR-3UTR CAA 90 bp TGCTTCCTCTGGAGCTCTGCCTCAAAGGGAACAAGTCCCACCACTTCCCTGACCGCAAAACAATGCCAGTaGCTATGGGCACAGAGTTGG +
Preference number: 3 (lower is better)
Translates to: CFLWSSASKGTSPTTSLTAKQCQ*LWAQSW
Trigger: CCAACTCTGTGCCCATAGCAACTGGCATTGTTTTGC...GGTCAGGGAAGTGGTGGGACTTGTTCCCTTTGAGGCAGAGCTCCAGAGGAAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
3UTR-3UTR CAA 90 bp AGAAGCAGCCCTGCTTCCTCTGGAGCTCTGCCTCAAAGGGAACAAGTCCCACCAGCAAAACAATGCCAGTaGCTATGGGCACAGAGTTGG +
Preference number: 3 (lower is better)
Translates to: RSSPASSGALPQREQVPPAKQCQ*LWAQSW
Trigger: CCAACTCTGTGCCCATAGCAACTGGCATTGTTTTGC...TGGTGGGACTTGTTCCCTTTGAGGCAGAGCTCCAGAGGAAGCAGGGCTGCTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
3UTR CCA 72 bp GGTCTCCCTATGTTGACCATACCGGTCTTGAACTCTTaGGCTCCAGCAATCCTGGGCTTCCCAAAGTGTTGG +
Preference number: 3 (lower is better)
Translates to: GLPMLTIPVLNS*APAILGFPKCW
Trigger: CCAACACTTTGGGAAGCCCAGGATTGCTGGAGCCCAAGAGTTCAAGACCGGTATGGTCAACATAGGGAGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000645100.1
ENST00000647136.1
3UTR-3UTR CAA 90 bp GAACTATTTGGCCAGGGAATCCTACCAGTGAGTGATTTCCCTGGGGGCAGTAACTTGCCCAGGTTGGTCTaGAACCTCCTGGGCTTAAGC +
Preference number: 3 (lower is better)
Translates to: ELFGQGILPVSDFPGGSNLPRLV*NLLGLS
Trigger: GCTTAAGCCCAGGAGGTTCAAGACCAACCTGGGCAA...GTTACTGCCCCCAGGGAAATCACTCACTGGTAGGATTCCCTGGCCAAATAGTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
3UTR-3UTR CAA 90 bp TGCTTCCTCTGGAGCTCTGCCTCAAAGGGAACAAGTCCCACCACTTCCCTGACCAATATCTGGGACTGGTaGCAGAAGAATCCAGAGGGA +
Preference number: 3 (lower is better)
Translates to: CFLWSSASKGTSPTTSLTNIWDW*QKNPEG
Trigger: TCCCTCTGGATTCTTCTGCAACCAGTCCCAGATATT...GGTCAGGGAAGTGGTGGGACTTGTTCCCTTTGAGGCAGAGCTCCAGAGGAAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510784.8
ENST00000540914.5
3UTR-3UTR CAA 90 bp CTCCACTCCTACTCCATTAGGATTTCTCTGACTTCTAGGTTCCTCCACCTCAAAGCTATGTTGCCCAGGTaGGTCTTGAACCTCCTGGGC +
Preference number: 3 (lower is better)
Translates to: LHSYSIRISLTSRFLHLKAMLPR*VLNLLG
Trigger: GCCCAGGAGGTTCAAGACCAACCTGGGCAACATAGC...TTTGAGGTGGAGGAACCTAGAAGTCAGAGAAATCCTAATGGAGTAGGAGTGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
3UTR-3UTR CAA 90 bp AAGGGAACAAGTCCCACCACTTCCCTGACCAGGCCCTGGCATCATGGGAGCAATAGGGAAGTCAGCAGGTaGAAGAATAGGAAACAAGAT +
Preference number: 3 (lower is better)
Translates to: KGTSPTTSLTRPWHHGSNREVSR*KNRKQD
Trigger: ATCTTGTTTCCTATTCTTCAACCTGCTGACTTCCCT...ATTGCTCCCATGATGCCAGGGCCTGGTCAGGGAAGTGGTGGGACTTGTTCCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510784.8
ENST00000540914.5
3UTR-3UTR CAA 90 bp GGGGTGGGTCGAATGGGACAAATTCTGCAAGTTAGAAGCACTAAATGTCCTCCAAAGGTAGGAAGGGCCTaGCAGGGATCTGTCTCTGAC +
Preference number: 3 (lower is better)
Translates to: GVGRMGQILQVRSTKCPPKVGRA*QGSVSD
Trigger: GTCAGAGACAGATCCCTGCAAGGCCCTTCCTACCTT...TGGAGGACATTTAGTGCTTCTAACTTGCAGAATTTGTCCCATTCGACCCACCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
3UTR-3UTR CAA 90 bp TCTGGCCTGGAGCATTCTATAATGCTGGCCACATGCAGAAACATTACAAGCAAAAAGGTAGGAAGGGCCTaGCAGGGATCTGTCTCTGAC +
Preference number: 3 (lower is better)
Translates to: SGLEHSIMLATCRNITSKKVGRA*QGSVSD
Trigger: GTCAGAGACAGATCCCTGCAAGGCCCTTCCTACCTT...TTTGCTTGTAATGTTTCTGCATGTGGCCAGCATTATAGAATGCTCCAGGCCAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
3UTR-3UTR CAA 90 bp GTGATTTCCCTGGGGGCAGTAACCACCCCTCAGGATGTCCTTCTTTCTAATCCCACATTTTTATTTCAGTaGTCGTGTCTCTCAGGCTCT +
Preference number: 3 (lower is better)
Translates to: VISLGAVTTPQDVLLSNPTFLFQ*SCLSGS
Trigger: AGAGCCTGAGAGACACGACAACTGAAATAAAAATGT...GGGATTAGAAAGAAGGACATCCTGAGGGGTGGTTACTGCCCCCAGGGAAATCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
3UTR-3UTR CAA 90 bp GATAAGTTCACAGTTGAAAGAACCATTTGCCAGAAGCCTGGCAAACAATTTGCAGCTATGTTGCCCAGGTaGGTCTTGAACCTCCTGGGC +
Preference number: 3 (lower is better)
Translates to: DKFTVERTICQKPGKQFAAMLPR*VLNLLG
Trigger: GCCCAGGAGGTTCAAGACCAACCTGGGCAACATAGC...TGCAAATTGTTTGCCAGGCTTCTGGCAAATGGTTCTTTCAACTGTGAACTTATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
3UTR-3UTR CAA 90 bp ATTACACTCACATATATTGTTTTGATACCTTGGCATACCCCACCTTGTACACTCGCTATGTTGCCCAGGTaGGTCTTGAACCTCCTGGGC +
Preference number: 3 (lower is better)
Translates to: ITLTYIVLIPWHTPPCTLAMLPR*VLNLLG
Trigger: GCCCAGGAGGTTCAAGACCAACCTGGGCAACATAGC...GAGTGTACAAGGTGGGGTATGCCAAGGTATCAAAACAATATATGTGAGTGTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
3UTR-3UTR CAA 90 bp AAAATGGCACAATATCTGGGACTGGTTGCAGAAGAATCCAGAGGGAAGTCAGCAAAGATTGGCCATGAGTaGATCACTGAGGAGGTTGAG +
Preference number: 3 (lower is better)
Translates to: KMAQYLGLVAEESRGKSAKIGHE*ITEEVE
Trigger: CTCAACCTCCTCAGTGATCAACTCATGGCCAATCTT...TGCTGACTTCCCTCTGGATTCTTCTGCAACCAGTCCCAGATATTGTGCCATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
3UTR-3UTR CAA 90 bp AAACCATGTCAACCACAAAGCCTTGGGAAACAGAACTGCTATATCCCTCTGCCTAATATCTGGGACTGGTaGCAGAAGAATCCAGAGGGA +
Preference number: 3 (lower is better)
Translates to: KPCQPQSLGKQNCYIPLPNIWDW*QKNPEG
Trigger: TCCCTCTGGATTCTTCTGCAACCAGTCCCAGATATT...AGGCAGAGGGATATAGCAGTTCTGTTTCCCAAGGCTTTGTGGTTGACATGGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510784.8
ENST00000540914.5
3UTR-3UTR CAA 90 bp AAACCATGTCAACCACAAAGCCTTGGGAAACAGAACTGCTATATCCCTCTGCCTGAAAGAATGAATGCCTaGGGCATGACAAGAAGCAGC +
Preference number: 3 (lower is better)
Translates to: KPCQPQSLGKQNCYIPLPERMNA*GMTRSS
Trigger: GCTGCTTCTTGTCATGCCCAAGGCATTCATTCTTTC...AGGCAGAGGGATATAGCAGTTCTGTTTCCCAAGGCTTTGTGGTTGACATGGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510784.8
ENST00000540914.5
3UTR GCA 72 bp AAGAGGATGCTGGGGTGGGTCGAATGGGACAAATTCTaGAAGTTAGAAGCACTAAATGTCCTCCATCCAGTT +
Preference number: 3 (lower is better)
Translates to: KRMLGWVEWDKF*KLEALNVLHPV
Trigger: AACTGGATGGAGGACATTTAGTGCTTCTAACTTGCAGAATTTGTCCCATTCGACCCACCCCAGCATCCTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
3UTR-3UTR CAA 90 bp ATTACACTCACATATATTGTTTTGATACCTTGGCATACCCCACCTTGTACACTCTTGCCCAGGTTGGTCTaGAACCTCCTGGGCTTAAGC +
Preference number: 3 (lower is better)
Translates to: ITLTYIVLIPWHTPPCTLLPRLV*NLLGLS
Trigger: GCTTAAGCCCAGGAGGTTCAAGACCAACCTGGGCAA...GAGTGTACAAGGTGGGGTATGCCAAGGTATCAAAACAATATATGTGAGTGTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
3UTR-3UTR CAA 90 bp GAACTATTTGGCCAGGGAATCCTACCAGTGAGTGATTTCCCTGGGGGCAGTAACGTGAATCTACAGCTTTaGGTTTTGATTTGTCTTAGC +
Preference number: 3 (lower is better)
Translates to: ELFGQGILPVSDFPGGSNVNLQL*VLICLS
Trigger: GCTAAGACAAATCAAAACCAAAAGCTGTAGATTCAC...GTTACTGCCCCCAGGGAAATCACTCACTGGTAGGATTCCCTGGCCAAATAGTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
3UTR GCA 72 bp AAACCATGTCAACCACAAAGCCTTGGGAAACAGAACTaGTATATCCCTCTGCCTAGTGCTCACCCCAAAATA +
Preference number: 3 (lower is better)
Translates to: KPCQPQSLGKQN*YIPLPSAHPKI
Trigger: TATTTTGGGGTGAGCACTAGGCAGAGGGATATAGCAGTTCTGTTTCCCAAGGCTTTGTGGTTGACATGGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000510784.8
ENST00000540914.5
3UTR CCA 72 bp GTACAACCATGGATAAAATGGCACAATATCTGGGACTaGTTGCAGAAGAATCCAGAGGGAAGTCAGCAGGTT +
Preference number: 3 (lower is better)
Translates to: VQPWIKWHNIWD*LQKNPEGSQQV
Trigger: AACCTGCTGACTTCCCTCTGGATTCTTCTGCAACCAGTCCCAGATATTGTGCCATTTTATCCATGGTTGTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
3UTR-3UTR CAA 90 bp GTACAACCATGGATAAAATGGCACAATATCTGGGACTGGTTGCAGAAGAATCCAAAGATTGGCCATGAGTaGATCACTGAGGAGGTTGAG +
Preference number: 3 (lower is better)
Translates to: VQPWIKWHNIWDWLQKNPKIGHE*ITEEVE
Trigger: CTCAACCTCCTCAGTGATCAACTCATGGCCAATCTT...TGGATTCTTCTGCAACCAGTCCCAGATATTGTGCCATTTTATCCATGGTTGTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
3UTR TCA 72 bp AAATGTTCCTCCACTCCTACTCCATTAGGATTTCTCTaGCTTCTAGGTTCCTCCACCTCAAAGAGCATCACA +
Preference number: 3 (lower is better)
Translates to: KCSSTPTPLGFL*LLGSSTSKSIT
Trigger: TGTGATGCTCTTTGAGGTGGAGGAACCTAGAAGTCAGAGAAATCCTAATGGAGTAGGAGTGGAGGAACATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
3UTR-3UTR CAA 90 bp CTCCACTCCTACTCCATTAGGATTTCTCTGACTTCTAGGTTCCTCCACCTCAAAACATTTTTATTTCAGTaGTCGTGTCTCTCAGGCTCT +
Preference number: 3 (lower is better)
Translates to: LHSYSIRISLTSRFLHLKTFLFQ*SCLSGS
Trigger: AGAGCCTGAGAGACACGACAACTGAAATAAAAATGT...TTTGAGGTGGAGGAACCTAGAAGTCAGAGAAATCCTAATGGAGTAGGAGTGGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
3UTR CCA 72 bp TTCCAAATATTCAAGAGGATGCTGGGGTGGGTCGAATaGGACAAATTCTGCAAGTTAGAAGCACTAAATGTC +
Preference number: 3 (lower is better)
Translates to: FQIFKRMLGWVE*DKFCKLEALNV
Trigger: GACATTTAGTGCTTCTAACTTGCAGAATTTGTCCCATTCGACCCACCCCAGCATCCTCTTGAATATTTGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
3UTR-3UTR CAA 90 bp CTCCACTCCTACTCCATTAGGATTTCTCTGACTTCTAGGTTCCTCCACCTCAAAGTGAATCTACAGCTTTaGGTTTTGATTTGTCTTAGC +
Preference number: 3 (lower is better)
Translates to: LHSYSIRISLTSRFLHLKVNLQL*VLICLS
Trigger: GCTAAGACAAATCAAAACCAAAAGCTGTAGATTCAC...TTTGAGGTGGAGGAACCTAGAAGTCAGAGAAATCCTAATGGAGTAGGAGTGGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
3UTR-3UTR CAA 90 bp GATAAGTTCACAGTTGAAAGAACCATTTGCCAGAAGCCTGGCAAACAATTTGCATATTGTTTTGATACCTaGGCATACCCCACCTTGTAC +
Preference number: 3 (lower is better)
Translates to: DKFTVERTICQKPGKQFAYCFDT*AYPTLY
Trigger: GTACAAGGTGGGGTATGCCAAGGTATCAAAACAATA...TGCAAATTGTTTGCCAGGCTTCTGGCAAATGGTTCTTTCAACTGTGAACTTATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
3UTR-3UTR CAA 90 bp GATATGTACACGATAAGTTCACAGTTGAAAGAACCATTTGCCAGAAGCCTGGCACTCACATATATTGTTTaGATACCTTGGCATACCCCA +
Preference number: 3 (lower is better)
Translates to: DMYTISSQLKEPFARSLALTYIV*IPWHTP
Trigger: TGGGGTATGCCAAGGTATCAAAACAATATATGTGAG...TGCCAGGCTTCTGGCAAATGGTTCTTTCAACTGTGAACTTATCGTGTACATATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
3UTR-3UTR CAA 90 bp GATATGTACACGATAAGTTCACAGTTGAAAGAACCATTTGCCAGAAGCCTGGCAGAATGGTCTTGTACTTaGCTTAATGAACTTGCATCT +
Preference number: 3 (lower is better)
Translates to: DMYTISSQLKEPFARSLAEWSCT*LNELAS
Trigger: AGATGCAAGTTCATTAAGCAAAGTACAAGACCATTC...TGCCAGGCTTCTGGCAAATGGTTCTTTCAACTGTGAACTTATCGTGTACATATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
3UTR-3UTR CAA 90 bp GATAAGTTCACAGTTGAAAGAACCATTTGCCAGAAGCCTGGCAAACAATTTGCAGAATGGTCTTGTACTTaGCTTAATGAACTTGCATCT +
Preference number: 3 (lower is better)
Translates to: DKFTVERTICQKPGKQFAEWSCT*LNELAS
Trigger: AGATGCAAGTTCATTAAGCAAAGTACAAGACCATTC...TGCAAATTGTTTGCCAGGCTTCTGGCAAATGGTTCTTTCAACTGTGAACTTATC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
3UTR-3UTR CAA 90 bp ATTACACTCACATATATTGTTTTGATACCTTGGCATACCCCACCTTGTACACTCGAATGGTCTTGTACTTaGCTTAATGAACTTGCATCT +
Preference number: 3 (lower is better)
Translates to: ITLTYIVLIPWHTPPCTLEWSCT*LNELAS
Trigger: AGATGCAAGTTCATTAAGCAAAGTACAAGACCATTC...GAGTGTACAAGGTGGGGTATGCCAAGGTATCAAAACAATATATGTGAGTGTAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
3UTR-3UTR CAA 90 bp ATATACAGATATGTACACGATAAGTTCACAGTTGAAAGAACCATTTGCCAGAAGACATTTTTATTTCAGTaGTCGTGTCTCTCAGGCTCT +
Preference number: 3 (lower is better)
Translates to: IYRYVHDKFTVERTICQKTFLFQ*SCLSGS
Trigger: AGAGCCTGAGAGACACGACAACTGAAATAAAAATGT...CTTCTGGCAAATGGTTCTTTCAACTGTGAACTTATCGTGTACATATCTGTATAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
3UTR-3UTR CAA 90 bp TTTCAACCATTTAACATAAGCTATAGGCTATACCTCCTAACTACAGACTGTACACTCACATATATTGTTTaGATACCTTGGCATACCCCA +
Preference number: 3 (lower is better)
Translates to: FQPFNISYRLYLLTTDCTLTYIV*IPWHTP
Trigger: TGGGGTATGCCAAGGTATCAAAACAATATATGTGAG...TGTACAGTCTGTAGTTAGGAGGTATAGCCTATAGCTTATGTTAAATGGTTGAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
3UTR-3UTR CAA 90 bp ATATACAGATATGTACACGATAAGTTCACAGTTGAAAGAACCATTTGCCAGAAGGTGAATCTACAGCTTTaGGTTTTGATTTGTCTTAGC +
Preference number: 3 (lower is better)
Translates to: IYRYVHDKFTVERTICQKVNLQL*VLICLS
Trigger: GCTAAGACAAATCAAAACCAAAAGCTGTAGATTCAC...CTTCTGGCAAATGGTTCTTTCAACTGTGAACTTATCGTGTACATATCTGTATAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CCA 90 bp TTCCCTGACCAGGCCCTGGCATCATGGGAGCAATCCCATTCTCTGGCCTGGAGCGGGGAGCCTGTTGAGTaGGAGGTGAGGGCGCAGTCC +
Preference number: 4 (lower is better)
Translates to: FPDQALASWEQSHSLAWSGEPVE*EVRAQS
Trigger: GGACTGCGCCCTCACCTCCCACTCAACAGGCTCCCC...GCTCCAGGCCAGAGAATGGGATTGCTCCCATGATGCCAGGGCCTGGTCAGGGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR TCA 90 bp AGAAGCAGCCCTGCTTCCTCTGGAGCTCTGCCTCAAAGGGAACAAGTCCCACCAGGGAGGGCAGGTCACTaGAGGAGCGGCTGCGGTGCA +
Preference number: 4 (lower is better)
Translates to: RSSPASSGALPQREQVPPGRAGH*RSGCGA
Trigger: TGCACCGCAGCCGCTCCTTCAGTGACCTGCCCTCCC...TGGTGGGACTTGTTCCCTTTGAGGCAGAGCTCCAGAGGAAGCAGGGCTGCTTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644411.1
CDS-3UTR TCA 90 bp GCAGCCCTGCTTCCTCTGGAGCTCTGCCTCAAAGGGAACAAGTCCCACCACTTCCTGTTGAGTGGGAGGTaGGGGCGCAGTCCCCGTTGG +
Preference number: 4 (lower is better)
Translates to: AALLPLELCLKGNKSHHFLLSGR*GRSPRW
Trigger: CCAACGGGGACTGCGCCCTCACCTCCCACTCAACAG...GAAGTGGTGGGACTTGTTCCCTTTGAGGCAGAGCTCCAGAGGAAGCAGGGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR TCA 90 bp AAGGGAACAAGTCCCACCACTTCCCTGACCAGGCCCTGGCATCATGGGAGCAATCTCAGCCCCAGCACCTaGGGACTGTCGGCGGCAAGC +
Preference number: 4 (lower is better)
Translates to: KGTSPTTSLTRPWHHGSNLSPST*GLSAAS
Trigger: GCTTGCCGCCGACAGTCCTCAGGTGCTGGGGCTGAG...ATTGCTCCCATGATGCCAGGGCCTGGTCAGGGAAGTGGTGGGACTTGTTCCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR GCA 90 bp GCCTCAAAGGGAACAAGTCCCACCACTTCCCTGACCAGGCCCTGGCATCATGGGCCGCACCTCCGGCTTTaGAGACAGCCTGAGCTGGCT +
Preference number: 4 (lower is better)
Translates to: ASKGTSPTTSLTRPWHHGPHLRL*RQPELA
Trigger: AGCCAGCTCAGGCTGTCTGCAAAGCCGGAGGTGCGG...CCCATGATGCCAGGGCCTGGTCAGGGAAGTGGTGGGACTTGTTCCCTTTGAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644411.1
CDS-3UTR CCA 90 bp CAGCCCTGCTTCCTCTGGAGCTCTGCCTCAAAGGGAACAAGTCCCACCACTTCCGGGGAGCCTGTTGAGTaGGAGGTGAGGGCGCAGTCC +
Preference number: 4 (lower is better)
Translates to: QPCFLWSSASKGTSPTTSGEPVE*EVRAQS
Trigger: GGACTGCGCCCTCACCTCCCACTCAACAGGCTCCCC...GGAAGTGGTGGGACTTGTTCCCTTTGAGGCAGAGCTCCAGAGGAAGCAGGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR TCA 90 bp GCCTCAAAGGGAACAAGTCCCACCACTTCCCTGACCAGGCCCTGGCATCATGGGCTTGTTCCCAGCGCCTaGGGATGCGGTCATGTCCTC +
Preference number: 4 (lower is better)
Translates to: ASKGTSPTTSLTRPWHHGLVPSA*GCGHVL
Trigger: GAGGACATGACCGCATCCTCAGGCGCTGGGAACAAG...CCCATGATGCCAGGGCCTGGTCAGGGAAGTGGTGGGACTTGTTCCCTTTGAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR TCA 90 bp TGCTTCCTCTGGAGCTCTGCCTCAAAGGGAACAAGTCCCACCACTTCCCTGACCCTGTTGAGTGGGAGGTaGGGGCGCAGTCCCCGTTGG +
Preference number: 4 (lower is better)
Translates to: CFLWSSASKGTSPTTSLTLLSGR*GRSPRW
Trigger: CCAACGGGGACTGCGCCCTCACCTCCCACTCAACAG...GGTCAGGGAAGTGGTGGGACTTGTTCCCTTTGAGGCAGAGCTCCAGAGGAAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR TCA 90 bp AGCAGCCCTGCTTCCTCTGGAGCTCTGCCTCAAAGGGAACAAGTCCCACCACTTGGAAGGGGAGCCTGTTaGGTGGGAGGTGAGGGCGCA +
Preference number: 4 (lower is better)
Translates to: SSPASSGALPQREQVPPLGRGAC*VGGEGA
Trigger: TGCGCCCTCACCTCCCACTCAACAGGCTCCCCTTCC...AAGTGGTGGGACTTGTTCCCTTTGAGGCAGAGCTCCAGAGGAAGCAGGGCTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR GCA 90 bp GCAGCCCTGCTTCCTCTGGAGCTCTGCCTCAAAGGGAACAAGTCCCACCACTTCTCCGCACCAATGCAATaGCCGGAGCTGCCCGCACCT +
Preference number: 4 (lower is better)
Translates to: AALLPLELCLKGNKSHHFSAPMQ*PELPAP
Trigger: AGGTGCGGGCAGCTCCGGGCATTGCATTGGTGCGGA...GAAGTGGTGGGACTTGTTCCCTTTGAGGCAGAGCTCCAGAGGAAGCAGGGCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644411.1
CDS-3UTR GCA 90 bp TTCCCTGACCAGGCCCTGGCATCATGGGAGCAATCCCATTCTCTGGCCTGGAGCTCTCCCGGGCAGCTTTaGTGGCAGGGGATGTTGCGA +
Preference number: 4 (lower is better)
Translates to: FPDQALASWEQSHSLAWSSPGQL*WQGMLR
Trigger: TCGCAACATCCCCTGCCAGCAAAGCTGCCCGGGAGA...GCTCCAGGCCAGAGAATGGGATTGCTCCCATGATGCCAGGGCCTGGTCAGGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR CCA 90 bp GCCTCAAAGGGAACAAGTCCCACCACTTCCCTGACCAGGCCCTGGCATCATGGGCTGGATCGCCTTTCCTaGAGGCCGCTGAAACCCGCA +
Preference number: 4 (lower is better)
Translates to: ASKGTSPTTSLTRPWHHGLDRLS*RPLKPA
Trigger: TGCGGGTTTCAGCGGCCTCCAGGAAAGGCGATCCAG...CCCATGATGCCAGGGCCTGGTCAGGGAAGTGGTGGGACTTGTTCCCTTTGAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR CCA 90 bp CAGCCCTGCTTCCTCTGGAGCTCTGCCTCAAAGGGAACAAGTCCCACCACTTCCCCCGGGCAGCTTTGCTaGCAGGGGATGTTGCGAAGG +
Preference number: 4 (lower is better)
Translates to: QPCFLWSSASKGTSPTTSPGQLC*QGMLRR
Trigger: CCTTCGCAACATCCCCTGCCAGCAAAGCTGCCCGGG...GGAAGTGGTGGGACTTGTTCCCTTTGAGGCAGAGCTCCAGAGGAAGCAGGGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR CCA 90 bp AGAAGCAGCCCTGCTTCCTCTGGAGCTCTGCCTCAAAGGGAACAAGTCCCACCAGGGGAGCCTGTTGAGTaGGAGGTGAGGGCGCAGTCC +
Preference number: 4 (lower is better)
Translates to: RSSPASSGALPQREQVPPGEPVE*EVRAQS
Trigger: GGACTGCGCCCTCACCTCCCACTCAACAGGCTCCCC...TGGTGGGACTTGTTCCCTTTGAGGCAGAGCTCCAGAGGAAGCAGGGCTGCTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR CCA 90 bp CAGCCCTGCTTCCTCTGGAGCTCTGCCTCAAAGGGAACAAGTCCCACCACTTCCGGTAGTCGGTTGAGCTaGCGCCTCCGGATCCTGTCC +
Preference number: 4 (lower is better)
Translates to: QPCFLWSSASKGTSPTTSGSRLS*RLRILS
Trigger: GGACAGGATCCGGAGGCGCCAGCTCAACCGACTACC...GGAAGTGGTGGGACTTGTTCCCTTTGAGGCAGAGCTCCAGAGGAAGCAGGGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510784.8
CDS-3UTR TCA 90 bp ACTTCCCTGACCAGGCCCTGGCATCATGGGAGCAATCCCATTCTCTGGCCTGGATTTCCTGGAGGCCGCTaGAACCCGCAAAGGACTGGC +
Preference number: 4 (lower is better)
Translates to: TSLTRPWHHGSNPILWPGFPGGR*NPQRTG
Trigger: GCCAGTCCTTTGCGGGTTTCAGCGGCCTCCAGGAAA...TCCAGGCCAGAGAATGGGATTGCTCCCATGATGCCAGGGCCTGGTCAGGGAAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR TCA 90 bp GCAGCCCTGCTTCCTCTGGAGCTCTGCCTCAAAGGGAACAAGTCCCACCACTTCCTTGTTCCCAGCGCCTaGGGATGCGGTCATGTCCTC +
Preference number: 4 (lower is better)
Translates to: AALLPLELCLKGNKSHHFLVPSA*GCGHVL
Trigger: GAGGACATGACCGCATCCTCAGGCGCTGGGAACAAG...GAAGTGGTGGGACTTGTTCCCTTTGAGGCAGAGCTCCAGAGGAAGCAGGGCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR GCA 90 bp CAGCCCTGCTTCCTCTGGAGCTCTGCCTCAAAGGGAACAAGTCCCACCACTTCCTCTCCCGGGCAGCTTTaGTGGCAGGGGATGTTGCGA +
Preference number: 4 (lower is better)
Translates to: QPCFLWSSASKGTSPTTSSPGQL*WQGMLR
Trigger: TCGCAACATCCCCTGCCAGCAAAGCTGCCCGGGAGA...GGAAGTGGTGGGACTTGTTCCCTTTGAGGCAGAGCTCCAGAGGAAGCAGGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR GCA 90 bp TTCCCTGACCAGGCCCTGGCATCATGGGAGCAATCCCATTCTCTGGCCTGGAGCGACAAGAAGCAGCCCTaGTTCCTCTGGAGCTCTGCC +
Preference number: 4 (lower is better)
Translates to: FPDQALASWEQSHSLAWSDKKQP*FLWSSA
Trigger: GGCAGAGCTCCAGAGGAAGCAGGGCTGCTTCTTGTC...GCTCCAGGCCAGAGAATGGGATTGCTCCCATGATGCCAGGGCCTGGTCAGGGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR GCA 90 bp TTCCCTGACCAGGCCCTGGCATCATGGGAGCAATCCCATTCTCTGGCCTGGAGCGTGATCACAGCTCACTaGAGCCTCAATCTCCCGGGC +
Preference number: 4 (lower is better)
Translates to: FPDQALASWEQSHSLAWSVITAH*SLNLPG
Trigger: GCCCGGGAGATTGAGGCTGCAGTGAGCTGTGATCAC...GCTCCAGGCCAGAGAATGGGATTGCTCCCATGATGCCAGGGCCTGGTCAGGGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000645100.1
ENST00000647136.1
CDS-3UTR CCA 90 bp GTGATTTCCCTGGGGGCAGTAACCACCCCTCAGGATGTCCTTCTTTCTAATCCCCGGGAGGAAGTCGGGTaGACGCGAGCTGTCCCCAGC +
Preference number: 4 (lower is better)
Translates to: VISLGAVTTPQDVLLSNPREEVG*TRAVPS
Trigger: GCTGGGGACAGCTCGCGTCCACCCGACTTCCTCCCG...GGGATTAGAAAGAAGGACATCCTGAGGGGTGGTTACTGCCCCCAGGGAAATCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000259698.9
CDS-3UTR CCA 90 bp GCAGCCCTGCTTCCTCTGGAGCTCTGCCTCAAAGGGAACAAGTCCCACCACTTCGCAGACAGCCTGAGCTaGCTCACTTGGGTGAAGGGG +
Preference number: 4 (lower is better)
Translates to: AALLPLELCLKGNKSHHFADSLS*LTWVKG
Trigger: CCCCTTCACCCAAGTGAGCCAGCTCAGGCTGTCTGC...GAAGTGGTGGGACTTGTTCCCTTTGAGGCAGAGCTCCAGAGGAAGCAGGGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644411.1
CDS-3UTR CCA 90 bp AAGGGAACAAGTCCCACCACTTCCCTGACCAGGCCCTGGCATCATGGGAGCAATCCCGGGCAGCTTTGCTaGCAGGGGATGTTGCGAAGG +
Preference number: 4 (lower is better)
Translates to: KGTSPTTSLTRPWHHGSNPGQLC*QGMLRR
Trigger: CCTTCGCAACATCCCCTGCCAGCAAAGCTGCCCGGG...ATTGCTCCCATGATGCCAGGGCCTGGTCAGGGAAGTGGTGGGACTTGTTCCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR CCA 90 bp GCCTCAAAGGGAACAAGTCCCACCACTTCCCTGACCAGGCCCTGGCATCATGGGCCGAGGCAGGTTTTCTaGGCTCCTCTGGGTCTTCCT +
Preference number: 4 (lower is better)
Translates to: ASKGTSPTTSLTRPWHHGPRQVF*APLGLP
Trigger: AGGAAGACCCAGAGGAGCCCAGAAAACCTGCCTCGG...CCCATGATGCCAGGGCCTGGTCAGGGAAGTGGTGGGACTTGTTCCCTTTGAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR CCA 90 bp GCCTCAAAGGGAACAAGTCCCACCACTTCCCTGACCAGGCCCTGGCATCATGGGAGAGCAGCCTGTCTGTaGCCATTGGCACCTCTGCAG +
Preference number: 4 (lower is better)
Translates to: ASKGTSPTTSLTRPWHHGRAACL*PLAPLQ
Trigger: CTGCAGAGGTGCCAATGGCCACAGACAGGCTGCTCT...CCCATGATGCCAGGGCCTGGTCAGGGAAGTGGTGGGACTTGTTCCCTTTGAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR CCA 90 bp TTCCCTGACCAGGCCCTGGCATCATGGGAGCAATCCCATTCTCTGGCCTGGAGCCCGGTCTTGAACTCTTaGGCTCCAGCAATCCTGGGC +
Preference number: 4 (lower is better)
Translates to: FPDQALASWEQSHSLAWSPVLNS*APAILG
Trigger: GCCCAGGATTGCTGGAGCCCAAGAGTTCAAGACCGG...GCTCCAGGCCAGAGAATGGGATTGCTCCCATGATGCCAGGGCCTGGTCAGGGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000645100.1
ENST00000647136.1
CDS-3UTR TCA 90 bp TGCTTCCTCTGGAGCTCTGCCTCAAAGGGAACAAGTCCCACCACTTCCCTGACCTTTCCTGGAGGCCGCTaGAACCCGCAAAGGACTGGC +
Preference number: 4 (lower is better)
Translates to: CFLWSSASKGTSPTTSLTFPGGR*NPQRTG
Trigger: GCCAGTCCTTTGCGGGTTTCAGCGGCCTCCAGGAAA...GGTCAGGGAAGTGGTGGGACTTGTTCCCTTTGAGGCAGAGCTCCAGAGGAAGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR TCA 90 bp AGAAGCAGCCCTGCTTCCTCTGGAGCTCTGCCTCAAAGGGAACAAGTCCCACCATCGACAGCCACTACCTaGGGTCGGGCTGCAAACAGC +
Preference number: 4 (lower is better)
Translates to: RSSPASSGALPQREQVPPSTATT*GRAANS
Trigger: GCTGTTTGCAGCCCGACCTCAGGTAGTGGCTGTCGA...TGGTGGGACTTGTTCCCTTTGAGGCAGAGCTCCAGAGGAAGCAGGGCTGCTTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR TCA 90 bp AGCAGCCCTGCTTCCTCTGGAGCTCTGCCTCAAAGGGAACAAGTCCCACCACTTTCGACAGCCACTACCTaGGGTCGGGCTGCAAACAGC +
Preference number: 4 (lower is better)
Translates to: SSPASSGALPQREQVPPLSTATT*GRAANS
Trigger: GCTGTTTGCAGCCCGACCTCAGGTAGTGGCTGTCGA...AAGTGGTGGGACTTGTTCCCTTTGAGGCAGAGCTCCAGAGGAAGCAGGGCTGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR TCA 90 bp GTGATTTCCCTGGGGGCAGTAACCACCCCTCAGGATGTCCTTCTTTCTAATCCCCTGTTGAGTGGGAGGTaGGGGCGCAGTCCCCGTTGG +
Preference number: 4 (lower is better)
Translates to: VISLGAVTTPQDVLLSNPLLSGR*GRSPRW
Trigger: CCAACGGGGACTGCGCCCTCACCTCCCACTCAACAG...GGGATTAGAAAGAAGGACATCCTGAGGGGTGGTTACTGCCCCCAGGGAAATCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR TCA 90 bp CCTGGCATCATGGGAGCAATCCCATTCTCTGGCCTGGAGCATTCTATAATGCTGCTCAGCCCCAGCACCTaGGGACTGTCGGCGGCAAGC +
Preference number: 4 (lower is better)
Translates to: PGIMGAIPFSGLEHSIMLLSPST*GLSAAS
Trigger: GCTTGCCGCCGACAGTCCTCAGGTGCTGGGGCTGAG...CAGCATTATAGAATGCTCCAGGCCAGAGAATGGGATTGCTCCCATGATGCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR TCA 90 bp GTCTTGAACTCTTGGGCTCCAGCAATCCTGGGCTTCCCAAAGTGTTGGGATTACCTCAGCCCCAGCACCTaGGGACTGTCGGCGGCAAGC +
Preference number: 4 (lower is better)
Translates to: VLNSWAPAILGFPKCWDYLSPST*GLSAAS
Trigger: GCTTGCCGCCGACAGTCCTCAGGTGCTGGGGCTGAG...GTAATCCCAACACTTTGGGAAGCCCAGGATTGCTGGAGCCCAAGAGTTCAAGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000645100.1
ENST00000647136.1
CDS-3UTR GCA 90 bp AACAAGTCCCACCACTTCCCTGACCAGGCCCTGGCATCATGGGAGCAATCCCATTCTCCCGGGCAGCTTTaGTGGCAGGGGATGTTGCGA +
Preference number: 4 (lower is better)
Translates to: NKSHHFPDQALASWEQSHSPGQL*WQGMLR
Trigger: TCGCAACATCCCCTGCCAGCAAAGCTGCCCGGGAGA...ATGGGATTGCTCCCATGATGCCAGGGCCTGGTCAGGGAAGTGGTGGGACTTGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR GCA 90 bp GCCTCAAAGGGAACAAGTCCCACCACTTCCCTGACCAGGCCCTGGCATCATGGGTTCTCAAGGAACAGGTaGTCAGCCCCAGCACCTGAG +
Preference number: 4 (lower is better)
Translates to: ASKGTSPTTSLTRPWHHGFSRNR*SAPAPE
Trigger: CTCAGGTGCTGGGGCTGAGCACCTGTTCCTTGAGAA...CCCATGATGCCAGGGCCTGGTCAGGGAAGTGGTGGGACTTGTTCCCTTTGAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR GCA 90 bp GCCTCAAAGGGAACAAGTCCCACCACTTCCCTGACCAGGCCCTGGCATCATGGGGGCCATTGGCACCTCTaGAGATGTGAGCCTCTTGAC +
Preference number: 4 (lower is better)
Translates to: ASKGTSPTTSLTRPWHHGGHWHL*RCEPLD
Trigger: GTCAAGAGGCTCACATCTGCAGAGGTGCCAATGGCC...CCCATGATGCCAGGGCCTGGTCAGGGAAGTGGTGGGACTTGTTCCCTTTGAGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR CCA 90 bp AGAAGCAGCCCTGCTTCCTCTGGAGCTCTGCCTCAAAGGGAACAAGTCCCACCACTGGATCGCCTTTCCTaGAGGCCGCTGAAACCCGCA +
Preference number: 4 (lower is better)
Translates to: RSSPASSGALPQREQVPPLDRLS*RPLKPA
Trigger: TGCGGGTTTCAGCGGCCTCCAGGAAAGGCGATCCAG...TGGTGGGACTTGTTCCCTTTGAGGCAGAGCTCCAGAGGAAGCAGGGCTGCTTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR CCA 90 bp GCCTCAAAGGGAACAAGTCCCACCACTTCCCTGACCAGGCCCTGGCATCATGGGTTGCTGGCACCATCCTaGAGGCGTCGCTGGATACAA +
Preference number: 4 (lower is better)
Translates to: ASKGTSPTTSLTRPWHHGLLAPS*RRRWIQ
Trigger: TTGTATCCAGCGACGCCTCCAGGATGGTGCCAGCAA...CCCATGATGCCAGGGCCTGGTCAGGGAAGTGGTGGGACTTGTTCCCTTTGAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR CCA 90 bp CAGCCCTGCTTCCTCTGGAGCTCTGCCTCAAAGGGAACAAGTCCCACCACTTCCAGAGCAGCCTGTCTGTaGCCATTGGCACCTCTGCAG +
Preference number: 4 (lower is better)
Translates to: QPCFLWSSASKGTSPTTSRAACL*PLAPLQ
Trigger: CTGCAGAGGTGCCAATGGCCACAGACAGGCTGCTCT...GGAAGTGGTGGGACTTGTTCCCTTTGAGGCAGAGCTCCAGAGGAAGCAGGGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR CCA 90 bp AGCAGCCCTGCTTCCTCTGGAGCTCTGCCTCAAAGGGAACAAGTCCCACCACTTTCCCTGACCAGGCCCTaGCATCATGGGAGCAATCCC +
Preference number: 4 (lower is better)
Translates to: SSPASSGALPQREQVPPLSLTRP*HHGSNP
Trigger: GGGATTGCTCCCATGATGCCAGGGCCTGGTCAGGGA...AAGTGGTGGGACTTGTTCCCTTTGAGGCAGAGCTCCAGAGGAAGCAGGGCTGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR CCA 90 bp CAGCCCTGCTTCCTCTGGAGCTCTGCCTCAAAGGGAACAAGTCCCACCACTTCCCAGCCCTGCTTCCTCTaGAGCTCTGCCTCAAAGGGA +
Preference number: 4 (lower is better)
Translates to: QPCFLWSSASKGTSPTTSQPCFL*SSASKG
Trigger: TCCCTTTGAGGCAGAGCTCCAGAGGAAGCAGGGCTG...GGAAGTGGTGGGACTTGTTCCCTTTGAGGCAGAGCTCCAGAGGAAGCAGGGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR CCA 90 bp GCAGCCCTGCTTCCTCTGGAGCTCTGCCTCAAAGGGAACAAGTCCCACCACTTCCCGGTCTTGAACTCTTaGGCTCCAGCAATCCTGGGC +
Preference number: 4 (lower is better)
Translates to: AALLPLELCLKGNKSHHFPVLNS*APAILG
Trigger: GCCCAGGATTGCTGGAGCCCAAGAGTTCAAGACCGG...GAAGTGGTGGGACTTGTTCCCTTTGAGGCAGAGCTCCAGAGGAAGCAGGGCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000645100.1
ENST00000647136.1
CDS-3UTR TCA 90 bp ATGGGAGCAATCCCATTCTCTGGCCTGGAGCATTCTATAATGCTGGCCACATGCGCTGGCTCACTTGGGTaGAGGGGACCCCGGGAGGAA +
Preference number: 4 (lower is better)
Translates to: MGAIPFSGLEHSIMLATCAGSLG*RGPREE
Trigger: TTCCTCCCGGGGTCCCCTTCACCCAAGTGAGCCAGC...GCATGTGGCCAGCATTATAGAATGCTCCAGGCCAGAGAATGGGATTGCTCCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644411.1
CDS-3UTR TCA 90 bp AATGCCTTGGGCATGACAAGAAGCAGCCCTGCTTCCTCTGGAGCTCTGCCTCAATTTCCTGGAGGCCGCTaGAACCCGCAAAGGACTGGC +
Preference number: 4 (lower is better)
Translates to: NALGMTRSSPASSGALPQFPGGR*NPQRTG
Trigger: GCCAGTCCTTTGCGGGTTTCAGCGGCCTCCAGGAAA...TTGAGGCAGAGCTCCAGAGGAAGCAGGGCTGCTTCTTGTCATGCCCAAGGCATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000645100.1
ENST00000647136.1
CDS-3UTR TCA 90 bp ATGTTTGAACTATTTGGCCAGGGAATCCTACCAGTGAGTGATTTCCCTGGGGGCGGGAGGGCAGGTCACTaGAGGAGCGGCTGCGGTGCA +
Preference number: 4 (lower is better)
Translates to: MFELFGQGILPVSDFPGGGRAGH*RSGCGA
Trigger: TGCACCGCAGCCGCTCCTTCAGTGACCTGCCCTCCC...GCCCCCAGGGAAATCACTCACTGGTAGGATTCCCTGGCCAAATAGTTCAAACAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000259698.9
ENST00000613507.4
CDS-3UTR TCA 90 bp GAACTATTTGGCCAGGGAATCCTACCAGTGAGTGATTTCCCTGGGGGCAGTAACGGAAGGGGAGCCTGTTaGGTGGGAGGTGAGGGCGCA +
Preference number: 4 (lower is better)
Translates to: ELFGQGILPVSDFPGGSNGRGAC*VGGEGA
Trigger: TGCGCCCTCACCTCCCACTCAACAGGCTCCCCTTCC...GTTACTGCCCCCAGGGAAATCACTCACTGGTAGGATTCCCTGGCCAAATAGTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR TCA 90 bp GCCTCAAAGGGAACAAGTCCCACCACTTCCCTGACCAGGCCCTGGCATCATGGGGTTCCTGGAAGATGCTaGGCTGGTGTCATCCATACC +
Preference number: 4 (lower is better)
Translates to: ASKGTSPTTSLTRPWHHGVPGRC*AGVIHT
Trigger: GGTATGGATGACACCAGCTCAGCATCTTCCAGGAAC...CCCATGATGCCAGGGCCTGGTCAGGGAAGTGGTGGGACTTGTTCCCTTTGAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR TCA 90 bp TTCCCTGACCAGGCCCTGGCATCATGGGAGCAATCCCATTCTCTGGCCTGGAGCGTTCCTGGAAGATGCTaGGCTGGTGTCATCCATACC +
Preference number: 4 (lower is better)
Translates to: FPDQALASWEQSHSLAWSVPGRC*AGVIHT
Trigger: GGTATGGATGACACCAGCTCAGCATCTTCCAGGAAC...GCTCCAGGCCAGAGAATGGGATTGCTCCCATGATGCCAGGGCCTGGTCAGGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR TCA 90 bp AATGGCACAATATCTGGGACTGGTTGCAGAAGAATCCAGAGGGAAGTCAGCAGGCTCAGCCCCAGCACCTaGGGACTGTCGGCGGCAAGC +
Preference number: 4 (lower is better)
Translates to: NGTISGTGCRRIQREVSRLSPST*GLSAAS
Trigger: GCTTGCCGCCGACAGTCCTCAGGTGCTGGGGCTGAG...CCTGCTGACTTCCCTCTGGATTCTTCTGCAACCAGTCCCAGATATTGTGCCATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR GCA 90 bp GTGATTTCCCTGGGGGCAGTAACCACCCCTCAGGATGTCCTTCTTTCTAATCCCAAGCCTCCGCACCAATaGAATGCCCGGAGCTGCCCG +
Preference number: 4 (lower is better)
Translates to: VISLGAVTTPQDVLLSNPKPPHQ*NARSCP
Trigger: CGGGCAGCTCCGGGCATTGCATTGGTGCGGAGGCTT...GGGATTAGAAAGAAGGACATCCTGAGGGGTGGTTACTGCCCCCAGGGAAATCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000259698.9
CDS-3UTR GCA 90 bp AATGCCTTGGGCATGACAAGAAGCAGCCCTGCTTCCTCTGGAGCTCTGCCTCAATCTCCTCTGAAGGGCTaGTGCCTTGTTCCCAGCGCC +
Preference number: 4 (lower is better)
Translates to: NALGMTRSSPASSGALPQSPLKG*CLVPSA
Trigger: GGCGCTGGGAACAAGGCAGCAGCCCTTCAGAGGAGA...TTGAGGCAGAGCTCCAGAGGAAGCAGGGCTGCTTCTTGTCATGCCCAAGGCATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000645100.1
ENST00000647136.1
CDS-3UTR GCA 90 bp TTCCCTGACCAGGCCCTGGCATCATGGGAGCAATCCCATTCTCTGGCCTGGAGCCTTCCTCTGGAGCTCTaGCTCAAAGGGAACAAGTCC +
Preference number: 4 (lower is better)
Translates to: FPDQALASWEQSHSLAWSLPLEL*LKGNKS
Trigger: GGACTTGTTCCCTTTGAGGCAGAGCTCCAGAGGAAG...GCTCCAGGCCAGAGAATGGGATTGCTCCCATGATGCCAGGGCCTGGTCAGGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR GCA 90 bp AGAAGCAGCCCTGCTTCCTCTGGAGCTCTGCCTCAAAGGGAACAAGTCCCACCAGACAAGAAGCAGCCCTaGTTCCTCTGGAGCTCTGCC +
Preference number: 4 (lower is better)
Translates to: RSSPASSGALPQREQVPPDKKQP*FLWSSA
Trigger: GGCAGAGCTCCAGAGGAAGCAGGGCTGCTTCTTGTC...TGGTGGGACTTGTTCCCTTTGAGGCAGAGCTCCAGAGGAAGCAGGGCTGCTTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR CCA 90 bp ATCATGGGAGCAATCCCATTCTCTGGCCTGGAGCATTCTATAATGCTGGCCACACGGGAGGAAGTCGGGTaGACGCGAGCTGTCCCCAGC +
Preference number: 4 (lower is better)
Translates to: IMGAIPFSGLEHSIMLATREEVG*TRAVPS
Trigger: GCTGGGGACAGCTCGCGTCCACCCGACTTCCTCCCG...TGTGGCCAGCATTATAGAATGCTCCAGGCCAGAGAATGGGATTGCTCCCATGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644411.1
CDS-3UTR CCA 90 bp GTGATTTCCCTGGGGGCAGTAACCACCCCTCAGGATGTCCTTCTTTCTAATCCCCCCGGGCAGCTTTGCTaGCAGGGGATGTTGCGAAGG +
Preference number: 4 (lower is better)
Translates to: VISLGAVTTPQDVLLSNPPGQLC*QGMLRR
Trigger: CCTTCGCAACATCCCCTGCCAGCAAAGCTGCCCGGG...GGGATTAGAAAGAAGGACATCCTGAGGGGTGGTTACTGCCCCCAGGGAAATCAC
58% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CCA 90 bp CAGCCCTGCTTCCTCTGGAGCTCTGCCTCAAAGGGAACAAGTCCCACCACTTCCTCCATACCCTCATTCTaGGAGGCCAAGCTGCTGAGG +
Preference number: 4 (lower is better)
Translates to: QPCFLWSSASKGTSPTTSSIPSF*EAKLLR
Trigger: CCTCAGCAGCTTGGCCTCCCAGAATGAGGGTATGGA...GGAAGTGGTGGGACTTGTTCCCTTTGAGGCAGAGCTCCAGAGGAAGCAGGGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR CCA 90 bp AAGGGAACAAGTCCCACCACTTCCCTGACCAGGCCCTGGCATCATGGGAGCAATCCGAGGCAGGTTTTCTaGGCTCCTCTGGGTCTTCCT +
Preference number: 4 (lower is better)
Translates to: KGTSPTTSLTRPWHHGSNPRQVF*APLGLP
Trigger: AGGAAGACCCAGAGGAGCCCAGAAAACCTGCCTCGG...ATTGCTCCCATGATGCCAGGGCCTGGTCAGGGAAGTGGTGGGACTTGTTCCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR CCA 90 bp ACTTCCCTGACCAGGCCCTGGCATCATGGGAGCAATCCCATTCTCTGGCCTGGACCTGTCTGTGGCCATTaGCACCTCTGCAGATGTGAG +
Preference number: 4 (lower is better)
Translates to: TSLTRPWHHGSNPILWPGPVCGH*HLCRCE
Trigger: CTCACATCTGCAGAGGTGCCAATGGCCACAGACAGG...TCCAGGCCAGAGAATGGGATTGCTCCCATGATGCCAGGGCCTGGTCAGGGAAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR CCA 90 bp TGCTTCCTCTGGAGCTCTGCCTCAAAGGGAACAAGTCCCACCACTTCCCTGACCAGAGCAGCCTGTCTGTaGCCATTGGCACCTCTGCAG +
Preference number: 4 (lower is better)
Translates to: CFLWSSASKGTSPTTSLTRAACL*PLAPLQ
Trigger: CTGCAGAGGTGCCAATGGCCACAGACAGGCTGCTCT...GGTCAGGGAAGTGGTGGGACTTGTTCCCTTTGAGGCAGAGCTCCAGAGGAAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR CCA 90 bp AAGGGAACAAGTCCCACCACTTCCCTGACCAGGCCCTGGCATCATGGGAGCAATAGAGCAGCCTGTCTGTaGCCATTGGCACCTCTGCAG +
Preference number: 4 (lower is better)
Translates to: KGTSPTTSLTRPWHHGSNRAACL*PLAPLQ
Trigger: CTGCAGAGGTGCCAATGGCCACAGACAGGCTGCTCT...ATTGCTCCCATGATGCCAGGGCCTGGTCAGGGAAGTGGTGGGACTTGTTCCCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR CCA 90 bp AACAAGTCCCACCACTTCCCTGACCAGGCCCTGGCATCATGGGAGCAATCCCATGGGCTCCAGCAATCCTaGGCTTCCCAAAGTGTTGGG +
Preference number: 4 (lower is better)
Translates to: NKSHHFPDQALASWEQSHGLQQS*ASQSVG
Trigger: CCCAACACTTTGGGAAGCCCAGGATTGCTGGAGCCC...ATGGGATTGCTCCCATGATGCCAGGGCCTGGTCAGGGAAGTGGTGGGACTTGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000645100.1
ENST00000647136.1
CDS-3UTR TCA 90 bp GTGATTTCCCTGGGGGCAGTAACCACCCCTCAGGATGTCCTTCTTTCTAATCCCTTTCCTGGAGGCCGCTaGAACCCGCAAAGGACTGGC +
Preference number: 4 (lower is better)
Translates to: VISLGAVTTPQDVLLSNPFPGGR*NPQRTG
Trigger: GCCAGTCCTTTGCGGGTTTCAGCGGCCTCCAGGAAA...GGGATTAGAAAGAAGGACATCCTGAGGGGTGGTTACTGCCCCCAGGGAAATCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR TCA 90 bp GCCTCAAAGGGAACAAGTCCCACCACTTCCCTGACCAGGCCCTGGCATCATGGGTGGCCTGAGGCTTCTTaGGAGCGGAGGAATTTTCAA +
Preference number: 4 (lower is better)
Translates to: ASKGTSPTTSLTRPWHHGWPEAS*ERRNFQ
Trigger: TTGAAAATTCCTCCGCTCTCAAGAAGCCTCAGGCCA...CCCATGATGCCAGGGCCTGGTCAGGGAAGTGGTGGGACTTGTTCCCTTTGAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR TCA 90 bp GCAGCCCTGCTTCCTCTGGAGCTCTGCCTCAAAGGGAACAAGTCCCACCACTTCCTACCTACCAGGATGTaGGTTGCTAGCCCTTTGAGC +
Preference number: 4 (lower is better)
Translates to: AALLPLELCLKGNKSHHFLPTRM*VASPLS
Trigger: GCTCAAAGGGCTAGCAACTCACATCCTGGTAGGTAG...GAAGTGGTGGGACTTGTTCCCTTTGAGGCAGAGCTCCAGAGGAAGCAGGGCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR TCA 90 bp GGCATCATGGGAGCAATCCCATTCTCTGGCCTGGAGCATTCTATAATGCTGGCCTCGACAGCCACTACCTaGGGTCGGGCTGCAAACAGC +
Preference number: 4 (lower is better)
Translates to: GIMGAIPFSGLEHSIMLASTATT*GRAANS
Trigger: GCTGTTTGCAGCCCGACCTCAGGTAGTGGCTGTCGA...GGCCAGCATTATAGAATGCTCCAGGCCAGAGAATGGGATTGCTCCCATGATGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR TCA 90 bp GGCCATGAGTTGATCACTGAGGAGGTTGAGGGATGGGCACACTGGGATCCATTACTTGTTCCCAGCGCCTaGGGATGCGGTCATGTCCTC +
Preference number: 4 (lower is better)
Translates to: GHELITEEVEGWAHWDPLLVPSA*GCGHVL
Trigger: GAGGACATGACCGCATCCTCAGGCGCTGGGAACAAG...TAATGGATCCCAGTGTGCCCATCCCTCAACCTCCTCAGTGATCAACTCATGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR TCA 90 bp CAGCCCTGCTTCCTCTGGAGCTCTGCCTCAAAGGGAACAAGTCCCACCACTTCCATGGACATTCTCCTCTaGAGGGCTGCTGCCTTGTTC +
Preference number: 4 (lower is better)
Translates to: QPCFLWSSASKGTSPTTSMDILL*RAAALF
Trigger: GAACAAGGCAGCAGCCCTTCAGAGGAGAATGTCCAT...GGAAGTGGTGGGACTTGTTCCCTTTGAGGCAGAGCTCCAGAGGAAGCAGGGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR TCA 90 bp ATGTTTGAACTATTTGGCCAGGGAATCCTACCAGTGAGTGATTTCCCTGGGGGCCTGTTGAGTGGGAGGTaGGGGCGCAGTCCCCGTTGG +
Preference number: 4 (lower is better)
Translates to: MFELFGQGILPVSDFPGGLLSGR*GRSPRW
Trigger: CCAACGGGGACTGCGCCCTCACCTCCCACTCAACAG...GCCCCCAGGGAAATCACTCACTGGTAGGATTCCCTGGCCAAATAGTTCAAACAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR TCA 90 bp AATGGCACAATATCTGGGACTGGTTGCAGAAGAATCCAGAGGGAAGTCAGCAGGCTGTTGAGTGGGAGGTaGGGGCGCAGTCCCCGTTGG +
Preference number: 4 (lower is better)
Translates to: NGTISGTGCRRIQREVSRLLSGR*GRSPRW
Trigger: CCAACGGGGACTGCGCCCTCACCTCCCACTCAACAG...CCTGCTGACTTCCCTCTGGATTCTTCTGCAACCAGTCCCAGATATTGTGCCATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR TCA 90 bp CAGCCCTGCTTCCTCTGGAGCTCTGCCTCAAAGGGAACAAGTCCCACCACTTCCTTCCTCCTTCAGGTGTaGCTTTGGCTCTTGGCCTTC +
Preference number: 4 (lower is better)
Translates to: QPCFLWSSASKGTSPTTSFLLQV*LWLLAF
Trigger: GAAGGCCAAGAGCCAAAGTCACACCTGAAGGAGGAA...GGAAGTGGTGGGACTTGTTCCCTTTGAGGCAGAGCTCCAGAGGAAGCAGGGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR TCA 90 bp AAATGGCACAATATCTGGGACTGGTTGCAGAAGAATCCAGAGGGAAGTCAGCAGCTCAGCCCCAGCACCTaGGGACTGTCGGCGGCAAGC +
Preference number: 4 (lower is better)
Translates to: KWHNIWDWLQKNPEGSQQLSPST*GLSAAS
Trigger: GCTTGCCGCCGACAGTCCTCAGGTGCTGGGGCTGAG...CTGCTGACTTCCCTCTGGATTCTTCTGCAACCAGTCCCAGATATTGTGCCATTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR TCA 90 bp TTCCCTGACCAGGCCCTGGCATCATGGGAGCAATCCCATTCTCTGGCCTGGAGCGCAGGGATCTGTCTCTaGCACTCAAGATGGCACAAA +
Preference number: 4 (lower is better)
Translates to: FPDQALASWEQSHSLAWSAGICL*HSRWHK
Trigger: TTTGTGCCATCTTGAGTGTCAGAGACAGATCCCTGC...GCTCCAGGCCAGAGAATGGGATTGCTCCCATGATGCCAGGGCCTGGTCAGGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR GCA 90 bp GCAATCCCATTCTCTGGCCTGGAGCATTCTATAATGCTGGCCACATGCAGAAACTGCAATGCCCGGAGCTaGCCGCACCTCCGGCTTTGC +
Preference number: 4 (lower is better)
Translates to: AIPFSGLEHSIMLATCRNCNARS*PHLRLC
Trigger: GCAAAGCCGGAGGTGCGGGCAGCTCCGGGCATTGCA...GTTTCTGCATGTGGCCAGCATTATAGAATGCTCCAGGCCAGAGAATGGGATTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644411.1
CDS-3UTR GCA 90 bp GAACTATTTGGCCAGGGAATCCTACCAGTGAGTGATTTCCCTGGGGGCAGTAACTCCGCACCAATGCAATaGCCGGAGCTGCCCGCACCT +
Preference number: 4 (lower is better)
Translates to: ELFGQGILPVSDFPGGSNSAPMQ*PELPAP
Trigger: AGGTGCGGGCAGCTCCGGGCATTGCATTGGTGCGGA...GTTACTGCCCCCAGGGAAATCACTCACTGGTAGGATTCCCTGGCCAAATAGTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000259698.9
CDS-3UTR GCA 90 bp GTGATTTCCCTGGGGGCAGTAACCACCCCTCAGGATGTCCTTCTTTCTAATCCCTCTCCCGGGCAGCTTTaGTGGCAGGGGATGTTGCGA +
Preference number: 4 (lower is better)
Translates to: VISLGAVTTPQDVLLSNPSPGQL*WQGMLR
Trigger: TCGCAACATCCCCTGCCAGCAAAGCTGCCCGGGAGA...GGGATTAGAAAGAAGGACATCCTGAGGGGTGGTTACTGCCCCCAGGGAAATCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR GCA 90 bp AGAATGAATGCCTTGGGCATGACAAGAAGCAGCCCTGCTTCCTCTGGAGCTCTGTCTCCTCTGAAGGGCTaGTGCCTTGTTCCCAGCGCC +
Preference number: 4 (lower is better)
Translates to: RMNALGMTRSSPASSGALSPLKG*CLVPSA
Trigger: GGCGCTGGGAACAAGGCAGCAGCCCTTCAGAGGAGA...CAGAGCTCCAGAGGAAGCAGGGCTGCTTCTTGTCATGCCCAAGGCATTCATTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000645100.1
ENST00000647136.1
CDS-3UTR GCA 90 bp AGCAGCCCTGCTTCCTCTGGAGCTCTGCCTCAAAGGGAACAAGTCCCACCACTTTTCTCAAGGAACAGGTaGTCAGCCCCAGCACCTGAG +
Preference number: 4 (lower is better)
Translates to: SSPASSGALPQREQVPPLFSRNR*SAPAPE
Trigger: CTCAGGTGCTGGGGCTGAGCACCTGTTCCTTGAGAA...AAGTGGTGGGACTTGTTCCCTTTGAGGCAGAGCTCCAGAGGAAGCAGGGCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR GCA 90 bp AGAAGCAGCCCTGCTTCCTCTGGAGCTCTGCCTCAAAGGGAACAAGTCCCACCATTCTCAAGGAACAGGTaGTCAGCCCCAGCACCTGAG +
Preference number: 4 (lower is better)
Translates to: RSSPASSGALPQREQVPPFSRNR*SAPAPE
Trigger: CTCAGGTGCTGGGGCTGAGCACCTGTTCCTTGAGAA...TGGTGGGACTTGTTCCCTTTGAGGCAGAGCTCCAGAGGAAGCAGGGCTGCTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR GCA 90 bp TGCTTCCTCTGGAGCTCTGCCTCAAAGGGAACAAGTCCCACCACTTCCCTGACCTTCTCAAGGAACAGGTaGTCAGCCCCAGCACCTGAG +
Preference number: 4 (lower is better)
Translates to: CFLWSSASKGTSPTTSLTFSRNR*SAPAPE
Trigger: CTCAGGTGCTGGGGCTGAGCACCTGTTCCTTGAGAA...GGTCAGGGAAGTGGTGGGACTTGTTCCCTTTGAGGCAGAGCTCCAGAGGAAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR GCA 90 bp TTCCCTGACCAGGCCCTGGCATCATGGGAGCAATCCCATTCTCTGGCCTGGAGCGCCTCCTCAGACTCTTaGAGAAGTGCTTCTGCAACA +
Preference number: 4 (lower is better)
Translates to: FPDQALASWEQSHSLAWSASSDS*RSASAT
Trigger: TGTTGCAGAAGCACTTCTGCAAGAGTCTGAGGAGGC...GCTCCAGGCCAGAGAATGGGATTGCTCCCATGATGCCAGGGCCTGGTCAGGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR GCA 90 bp TGCTTCCTCTGGAGCTCTGCCTCAAAGGGAACAAGTCCCACCACTTCCCTGACCGGCCATTGGCACCTCTaGAGATGTGAGCCTCTTGAC +
Preference number: 4 (lower is better)
Translates to: CFLWSSASKGTSPTTSLTGHWHL*RCEPLD
Trigger: GTCAAGAGGCTCACATCTGCAGAGGTGCCAATGGCC...GGTCAGGGAAGTGGTGGGACTTGTTCCCTTTGAGGCAGAGCTCCAGAGGAAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR GCA 90 bp AATGCCTTGGGCATGACAAGAAGCAGCCCTGCTTCCTCTGGAGCTCTGCCTCAAGACAAGAAGCAGCCCTaGTTCCTCTGGAGCTCTGCC +
Preference number: 4 (lower is better)
Translates to: NALGMTRSSPASSGALPQDKKQP*FLWSSA
Trigger: GGCAGAGCTCCAGAGGAAGCAGGGCTGCTTCTTGTC...TTGAGGCAGAGCTCCAGAGGAAGCAGGGCTGCTTCTTGTCATGCCCAAGGCATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000645100.1
ENST00000647136.1
CDS-3UTR CCA 90 bp GGGACTGGTTGCAGAAGAATCCAGAGGGAAGTCAGCAGGTTGAAGAATAGGAAACGGGAGGAAGTCGGGTaGACGCGAGCTGTCCCCAGC +
Preference number: 4 (lower is better)
Translates to: GTGCRRIQREVSRLKNRKREEVG*TRAVPS
Trigger: GCTGGGGACAGCTCGCGTCCACCCGACTTCCTCCCG...TTTCCTATTCTTCAACCTGCTGACTTCCCTCTGGATTCTTCTGCAACCAGTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644621.1
CDS-3UTR CCA 90 bp GTGATTTCCCTGGGGGCAGTAACCACCCCTCAGGATGTCCTTCTTTCTAATCCCCTGGATCGCCTTTCCTaGAGGCCGCTGAAACCCGCA +
Preference number: 4 (lower is better)
Translates to: VISLGAVTTPQDVLLSNPLDRLS*RPLKPA
Trigger: TGCGGGTTTCAGCGGCCTCCAGGAAAGGCGATCCAG...GGGATTAGAAAGAAGGACATCCTGAGGGGTGGTTACTGCCCCCAGGGAAATCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CCA 90 bp GGCATCATGGGAGCAATCCCATTCTCTGGCCTGGAGCATTCTATAATGCTGGCCCTGGATCGCCTTTCCTaGAGGCCGCTGAAACCCGCA +
Preference number: 4 (lower is better)
Translates to: GIMGAIPFSGLEHSIMLALDRLS*RPLKPA
Trigger: TGCGGGTTTCAGCGGCCTCCAGGAAAGGCGATCCAG...GGCCAGCATTATAGAATGCTCCAGGCCAGAGAATGGGATTGCTCCCATGATGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR CCA 90 bp AACAAGTCCCACCACTTCCCTGACCAGGCCCTGGCATCATGGGAGCAATCCCATTTGCTGGCACCATCCTaGAGGCGTCGCTGGATACAA +
Preference number: 4 (lower is better)
Translates to: NKSHHFPDQALASWEQSHLLAPS*RRRWIQ
Trigger: TTGTATCCAGCGACGCCTCCAGGATGGTGCCAGCAA...ATGGGATTGCTCCCATGATGCCAGGGCCTGGTCAGGGAAGTGGTGGGACTTGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR CCA 90 bp CATGAGTTGATCACTGAGGAGGTTGAGGGATGGGCACACTGGGATCCATTAGAGCCCGGGCAGCTTTGCTaGCAGGGGATGTTGCGAAGG +
Preference number: 4 (lower is better)
Translates to: HELITEEVEGWAHWDPLEPGQLC*QGMLRR
Trigger: CCTTCGCAACATCCCCTGCCAGCAAAGCTGCCCGGG...CTCTAATGGATCCCAGTGTGCCCATCCCTCAACCTCCTCAGTGATCAACTCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR CCA 90 bp GCCTCAAAGGGAACAAGTCCCACCACTTCCCTGACCAGGCCCTGGCATCATGGGTACCCTGGCTGTACATaGACATTCTCCTCTGAAGGG +
Preference number: 4 (lower is better)
Translates to: ASKGTSPTTSLTRPWHHGYPGCT*TFSSEG
Trigger: CCCTTCAGAGGAGAATGTCCATGTACAGCCAGGGTA...CCCATGATGCCAGGGCCTGGTCAGGGAAGTGGTGGGACTTGTTCCCTTTGAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR CCA 90 bp CAGCCCTGCTTCCTCTGGAGCTCTGCCTCAAAGGGAACAAGTCCCACCACTTCCGTTTCCGGGGTACCCTaGCTGTACATGGACATTCTC +
Preference number: 4 (lower is better)
Translates to: QPCFLWSSASKGTSPTTSVSGVP*LYMDIL
Trigger: GAGAATGTCCATGTACAGCCAGGGTACCCCGGAAAC...GGAAGTGGTGGGACTTGTTCCCTTTGAGGCAGAGCTCCAGAGGAAGCAGGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR CCA 90 bp TGCTTCCTCTGGAGCTCTGCCTCAAAGGGAACAAGTCCCACCACTTCCCTGACCGAAGCTGAGCGACAGTaGCATTTTCTCCTCGGCTGC +
Preference number: 4 (lower is better)
Translates to: CFLWSSASKGTSPTTSLTEAERQ*HFLLGC
Trigger: GCAGCCGAGGAGAAAATGCCACTGTCGCTCAGCTTC...GGTCAGGGAAGTGGTGGGACTTGTTCCCTTTGAGGCAGAGCTCCAGAGGAAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR CCA 90 bp AGAAGCAGCCCTGCTTCCTCTGGAGCTCTGCCTCAAAGGGAACAAGTCCCACCAGAAGCTGAGCGACAGTaGCATTTTCTCCTCGGCTGC +
Preference number: 4 (lower is better)
Translates to: RSSPASSGALPQREQVPPEAERQ*HFLLGC
Trigger: GCAGCCGAGGAGAAAATGCCACTGTCGCTCAGCTTC...TGGTGGGACTTGTTCCCTTTGAGGCAGAGCTCCAGAGGAAGCAGGGCTGCTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR CCA 90 bp AACAAGTCCCACCACTTCCCTGACCAGGCCCTGGCATCATGGGAGCAATCCCATGAAGCTGAGCGACAGTaGCATTTTCTCCTCGGCTGC +
Preference number: 4 (lower is better)
Translates to: NKSHHFPDQALASWEQSHEAERQ*HFLLGC
Trigger: GCAGCCGAGGAGAAAATGCCACTGTCGCTCAGCTTC...ATGGGATTGCTCCCATGATGCCAGGGCCTGGTCAGGGAAGTGGTGGGACTTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR CCA 90 bp GCAATCCCATTCTCTGGCCTGGAGCATTCTATAATGCTGGCCACATGCAGAAACGGGGAGCCTGTTGAGTaGGAGGTGAGGGCGCAGTCC +
Preference number: 4 (lower is better)
Translates to: AIPFSGLEHSIMLATCRNGEPVE*EVRAQS
Trigger: GGACTGCGCCCTCACCTCCCACTCAACAGGCTCCCC...GTTTCTGCATGTGGCCAGCATTATAGAATGCTCCAGGCCAGAGAATGGGATTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR CCA 90 bp ATGTTTGAACTATTTGGCCAGGGAATCCTACCAGTGAGTGATTTCCCTGGGGGCGGGGAGCCTGTTGAGTaGGAGGTGAGGGCGCAGTCC +
Preference number: 4 (lower is better)
Translates to: MFELFGQGILPVSDFPGGGEPVE*EVRAQS
Trigger: GGACTGCGCCCTCACCTCCCACTCAACAGGCTCCCC...GCCCCCAGGGAAATCACTCACTGGTAGGATTCCCTGGCCAAATAGTTCAAACAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CCA 90 bp AACAAGTCCCACCACTTCCCTGACCAGGCCCTGGCATCATGGGAGCAATCCCATCTCCCAGGGAGTTCCTaGAAGATGCTGAGCTGGTGT +
Preference number: 4 (lower is better)
Translates to: NKSHHFPDQALASWEQSHLPGSS*KMLSWC
Trigger: ACACCAGCTCAGCATCTTCCAGGAACTCCCTGGGAG...ATGGGATTGCTCCCATGATGCCAGGGCCTGGTCAGGGAAGTGGTGGGACTTGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR CCA 90 bp AGGGCCTTGCAGGGATCTGTCTCTGACACTCAAGATGGCACAAAAGCACATGGGGCGGCAAGCCTCAGATaGGGCCGAGGCAGGTTTTCT +
Preference number: 4 (lower is better)
Translates to: RALQGSVSDTQDGTKAHGAASLR*GRGRFS
Trigger: AGAAAACCTGCCTCGGCCCCATCTGAGGCTTGCCGC...CCCATGTGCTTTTGTGCCATCTTGAGTGTCAGAGACAGATCCCTGCAAGGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR CCA 90 bp AACAAGTCCCACCACTTCCCTGACCAGGCCCTGGCATCATGGGAGCAATCCCATCCTGTCTGTGGCCATTaGCACCTCTGCAGATGTGAG +
Preference number: 4 (lower is better)
Translates to: NKSHHFPDQALASWEQSHPVCGH*HLCRCE
Trigger: CTCACATCTGCAGAGGTGCCAATGGCCACAGACAGG...ATGGGATTGCTCCCATGATGCCAGGGCCTGGTCAGGGAAGTGGTGGGACTTGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR CCA 90 bp AAGGGAACAAGTCCCACCACTTCCCTGACCAGGCCCTGGCATCATGGGAGCAATCCTGTCTGTGGCCATTaGCACCTCTGCAGATGTGAG +
Preference number: 4 (lower is better)
Translates to: KGTSPTTSLTRPWHHGSNPVCGH*HLCRCE
Trigger: CTCACATCTGCAGAGGTGCCAATGGCCACAGACAGG...ATTGCTCCCATGATGCCAGGGCCTGGTCAGGGAAGTGGTGGGACTTGTTCCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR CCA 90 bp TTCCCTGACCAGGCCCTGGCATCATGGGAGCAATCCCATTCTCTGGCCTGGAGCTATTCAAGAGGATGCTaGGGTGGGTCGAATGGGACA +
Preference number: 4 (lower is better)
Translates to: FPDQALASWEQSHSLAWSYSRGC*GGSNGT
Trigger: TGTCCCATTCGACCCACCCCAGCATCCTCTTGAATA...GCTCCAGGCCAGAGAATGGGATTGCTCCCATGATGCCAGGGCCTGGTCAGGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR CCA 90 bp AGGGCCTTGCAGGGATCTGTCTCTGACACTCAAGATGGCACAAAAGCACATGGGTCCCTGACCAGGCCCTaGCATCATGGGAGCAATCCC +
Preference number: 4 (lower is better)
Translates to: RALQGSVSDTQDGTKAHGSLTRP*HHGSNP
Trigger: GGGATTGCTCCCATGATGCCAGGGCCTGGTCAGGGA...CCCATGTGCTTTTGTGCCATCTTGAGTGTCAGAGACAGATCCCTGCAAGGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR CCA 90 bp GGCCATGAGTTGATCACTGAGGAGGTTGAGGGATGGGCACACTGGGATCCATTATCCCTGACCAGGCCCTaGCATCATGGGAGCAATCCC +
Preference number: 4 (lower is better)
Translates to: GHELITEEVEGWAHWDPLSLTRP*HHGSNP
Trigger: GGGATTGCTCCCATGATGCCAGGGCCTGGTCAGGGA...TAATGGATCCCAGTGTGCCCATCCCTCAACCTCCTCAGTGATCAACTCATGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510784.8
ENST00000540914.5
CDS-3UTR CCA 90 bp AATGCCTTGGGCATGACAAGAAGCAGCCCTGCTTCCTCTGGAGCTCTGCCTCAACAGCCCTGCTTCCTCTaGAGCTCTGCCTCAAAGGGA +
Preference number: 4 (lower is better)
Translates to: NALGMTRSSPASSGALPQQPCFL*SSASKG
Trigger: TCCCTTTGAGGCAGAGCTCCAGAGGAAGCAGGGCTG...TTGAGGCAGAGCTCCAGAGGAAGCAGGGCTGCTTCTTGTCATGCCCAAGGCATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000645100.1
ENST00000647136.1
CDS-3UTR CCA 90 bp GGCCATGAGTTGATCACTGAGGAGGTTGAGGGATGGGCACACTGGGATCCATTAAACCCACCAGGGTGGTaGAAGCTGAGGACGCTCCAG +
Preference number: 4 (lower is better)
Translates to: GHELITEEVEGWAHWDPLNPPGW*KLRTLQ
Trigger: CTGGAGCGTCCTCAGCTTCCACCACCCTGGTGGGTT...TAATGGATCCCAGTGTGCCCATCCCTCAACCTCCTCAGTGATCAACTCATGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643623.1
CDS-3UTR CCA 90 bp GAACTATTTGGCCAGGGAATCCTACCAGTGAGTGATTTCCCTGGGGGCAGTAACCCGAACCCACCAGGGTaGTGGAAGCTGAGGACGCTC +
Preference number: 4 (lower is better)
Translates to: ELFGQGILPVSDFPGGSNPNPPG*WKLRTL
Trigger: GAGCGTCCTCAGCTTCCACCACCCTGGTGGGTTCGG...GTTACTGCCCCCAGGGAAATCACTCACTGGTAGGATTCCCTGGCCAAATAGTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000538035.6
CDS-3UTR CCA 90 bp CATGAGTTGATCACTGAGGAGGTTGAGGGATGGGCACACTGGGATCCATTAGAGCCCGACCGTACCCTGTaGGCTTCAGATGCCCGAACC +
Preference number: 4 (lower is better)
Translates to: HELITEEVEGWAHWDPLEPDRTL*ASDART
Trigger: GGTTCGGGCATCTGAAGCCCACAGGGTACGGTCGGG...CTCTAATGGATCCCAGTGTGCCCATCCCTCAACCTCCTCAGTGATCAACTCATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643623.1
CDS-3UTR TCA 90 bp AAATGGCACAATATCTGGGACTGGTTGCAGAAGAATCCAGAGGGAAGTCAGCAGGCTGGCTCACTTGGGTaGAGGGGACCCCGGGAGGAA +
Preference number: 4 (lower is better)
Translates to: KWHNIWDWLQKNPEGSQQAGSLG*RGPREE
Trigger: TTCCTCCCGGGGTCCCCTTCACCCAAGTGAGCCAGC...CTGCTGACTTCCCTCTGGATTCTTCTGCAACCAGTCCCAGATATTGTGCCATTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644621.1
CDS-3UTR TCA 90 bp AACAAGTCCCACCACTTCCCTGACCAGGCCCTGGCATCATGGGAGCAATCCCATTTCTTCAGTTTGGCCTaGGGCTTCTTGAGAGCGGAG +
Preference number: 4 (lower is better)
Translates to: NKSHHFPDQALASWEQSHFFSLA*GFLRAE
Trigger: CTCCGCTCTCAAGAAGCCTCAGGCCAAACTGAAGAA...ATGGGATTGCTCCCATGATGCCAGGGCCTGGTCAGGGAAGTGGTGGGACTTGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR TCA 90 bp ATGGGAGCAATCCCATTCTCTGGCCTGGAGCATTCTATAATGCTGGCCACATGCCTTGTTCCCAGCGCCTaGGGATGCGGTCATGTCCTC +
Preference number: 4 (lower is better)
Translates to: MGAIPFSGLEHSIMLATCLVPSA*GCGHVL
Trigger: GAGGACATGACCGCATCCTCAGGCGCTGGGAACAAG...GCATGTGGCCAGCATTATAGAATGCTCCAGGCCAGAGAATGGGATTGCTCCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR TCA 90 bp CAAGAAGCAGCCCTGCTTCCTCTGGAGCTCTGCCTCAAAGGGAACAAGTCCCACATGGACATTCTCCTCTaGAGGGCTGCTGCCTTGTTC +
Preference number: 4 (lower is better)
Translates to: QEAALLPLELCLKGNKSHMDILL*RAAALF
Trigger: GAACAAGGCAGCAGCCCTTCAGAGGAGAATGTCCAT...GTGGGACTTGTTCCCTTTGAGGCAGAGCTCCAGAGGAAGCAGGGCTGCTTCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR TCA 90 bp AGAATGAATGCCTTGGGCATGACAAGAAGCAGCCCTGCTTCCTCTGGAGCTCTGAGAAGGAGTGGTCTTTaGAGGTGGGCGTTTCCGGGG +
Preference number: 4 (lower is better)
Translates to: RMNALGMTRSSPASSGALRRSGL*RWAFPG
Trigger: CCCCGGAAACGCCCACCTTCAAAGACCACTCCTTCT...CAGAGCTCCAGAGGAAGCAGGGCTGCTTCTTGTCATGCCCAAGGCATTCATTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000645100.1
ENST00000647136.1
CDS-3UTR TCA 90 bp AAATGGCACAATATCTGGGACTGGTTGCAGAAGAATCCAGAGGGAAGTCAGCAGCTGTTGAGTGGGAGGTaGGGGCGCAGTCCCCGTTGG +
Preference number: 4 (lower is better)
Translates to: KWHNIWDWLQKNPEGSQQLLSGR*GRSPRW
Trigger: CCAACGGGGACTGCGCCCTCACCTCCCACTCAACAG...CTGCTGACTTCCCTCTGGATTCTTCTGCAACCAGTCCCAGATATTGTGCCATTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR TCA 90 bp GGGGTGGGTCGAATGGGACAAATTCTGCAAGTTAGAAGCACTAAATGTCCTCCACTGTTGAGTGGGAGGTaGGGGCGCAGTCCCCGTTGG +
Preference number: 4 (lower is better)
Translates to: GVGRMGQILQVRSTKCPPLLSGR*GRSPRW
Trigger: CCAACGGGGACTGCGCCCTCACCTCCCACTCAACAG...TGGAGGACATTTAGTGCTTCTAACTTGCAGAATTTGTCCCATTCGACCCACCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR TCA 90 bp ACAATATCTGGGACTGGTTGCAGAAGAATCCAGAGGGAAGTCAGCAGGTTGAAGGGAAGGGGAGCCTGTTaGGTGGGAGGTGAGGGCGCA +
Preference number: 4 (lower is better)
Translates to: TISGTGCRRIQREVSRLKGRGAC*VGGEGA
Trigger: TGCGCCCTCACCTCCCACTCAACAGGCTCCCCTTCC...CTTCAACCTGCTGACTTCCCTCTGGATTCTTCTGCAACCAGTCCCAGATATTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR TCA 90 bp AAATGGCACAATATCTGGGACTGGTTGCAGAAGAATCCAGAGGGAAGTCAGCAGGGAAGGGGAGCCTGTTaGGTGGGAGGTGAGGGCGCA +
Preference number: 4 (lower is better)
Translates to: KWHNIWDWLQKNPEGSQQGRGAC*VGGEGA
Trigger: TGCGCCCTCACCTCCCACTCAACAGGCTCCCCTTCC...CTGCTGACTTCCCTCTGGATTCTTCTGCAACCAGTCCCAGATATTGTGCCATTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR TCA 90 bp AAGGGAACAAGTCCCACCACTTCCCTGACCAGGCCCTGGCATCATGGGAGCAATTTCCTCCTTCAGGTGTaGCTTTGGCTCTTGGCCTTC +
Preference number: 4 (lower is better)
Translates to: KGTSPTTSLTRPWHHGSNFLLQV*LWLLAF
Trigger: GAAGGCCAAGAGCCAAAGTCACACCTGAAGGAGGAA...ATTGCTCCCATGATGCCAGGGCCTGGTCAGGGAAGTGGTGGGACTTGTTCCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR TCA 90 bp TGCTTCCTCTGGAGCTCTGCCTCAAAGGGAACAAGTCCCACCACTTCCCTGACCTTCCTCCTTCAGGTGTaGCTTTGGCTCTTGGCCTTC +
Preference number: 4 (lower is better)
Translates to: CFLWSSASKGTSPTTSLTFLLQV*LWLLAF
Trigger: GAAGGCCAAGAGCCAAAGTCACACCTGAAGGAGGAA...GGTCAGGGAAGTGGTGGGACTTGTTCCCTTTGAGGCAGAGCTCCAGAGGAAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR TCA 90 bp CTCCACTCCTACTCCATTAGGATTTCTCTGACTTCTAGGTTCCTCCACCTCAAACTCAGCCCCAGCACCTaGGGACTGTCGGCGGCAAGC +
Preference number: 4 (lower is better)
Translates to: LHSYSIRISLTSRFLHLKLSPST*GLSAAS
Trigger: GCTTGCCGCCGACAGTCCTCAGGTGCTGGGGCTGAG...TTTGAGGTGGAGGAACCTAGAAGTCAGAGAAATCCTAATGGAGTAGGAGTGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR TCA 90 bp AGAAGCAGCCCTGCTTCCTCTGGAGCTCTGCCTCAAAGGGAACAAGTCCCACCAGCAAGGAAGGCAGTTTaGGCGAGTTACTTCCCCAGA +
Preference number: 4 (lower is better)
Translates to: RSSPASSGALPQREQVPPARKAV*ASYFPR
Trigger: TCTGGGGAAGTAACTCGCTCAAACTGCCTTCCTTGC...TGGTGGGACTTGTTCCCTTTGAGGCAGAGCTCCAGAGGAAGCAGGGCTGCTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540914.5
CDS-3UTR TCA 90 bp GCAGCCCTGCTTCCTCTGGAGCTCTGCCTCAAAGGGAACAAGTCCCACCACTTCGCAGGGATCTGTCTCTaGCACTCAAGATGGCACAAA +
Preference number: 4 (lower is better)
Translates to: AALLPLELCLKGNKSHHFAGICL*HSRWHK
Trigger: TTTGTGCCATCTTGAGTGTCAGAGACAGATCCCTGC...GAAGTGGTGGGACTTGTTCCCTTTGAGGCAGAGCTCCAGAGGAAGCAGGGCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR TCA 90 bp ACTTCCCTGACCAGGCCCTGGCATCATGGGAGCAATCCCATTCTCTGGCCTGGATCCATGGCCTGTTTCTaGTCCAGTGTAATCGCGAAG +
Preference number: 4 (lower is better)
Translates to: TSLTRPWHHGSNPILWPGSMACF*SSVIAK
Trigger: CTTCGCGATTACACTGGATCAGAAACAGGCCATGGA...TCCAGGCCAGAGAATGGGATTGCTCCCATGATGCCAGGGCCTGGTCAGGGAAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510784.8
CDS-3UTR TCA 90 bp GGGACTGGTTGCAGAAGAATCCAGAGGGAAGTCAGCAGGTTGAAGAATAGGAAATGGTCGGTAGTCGGTTaGGCTGGCGCCTCCGGATCC +
Preference number: 4 (lower is better)
Translates to: GTGCRRIQREVSRLKNRKWSVVG*AGASGS
Trigger: GGATCCGGAGGCGCCAGCTCAACCGACTACCGACCA...TTTCCTATTCTTCAACCTGCTGACTTCCCTCTGGATTCTTCTGCAACCAGTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510784.8
CDS-3UTR TCA 90 bp GTGATTTCCCTGGGGGCAGTAACCACCCCTCAGGATGTCCTTCTTTCTAATCCCCAGGGTGGTGGAAGCTaGGGACGCTCCAGTTTCAAC +
Preference number: 4 (lower is better)
Translates to: VISLGAVTTPQDVLLSNPQGGGS*GRSSFN
Trigger: GTTGAAACTGGAGCGTCCTCAGCTTCCACCACCCTG...GGGATTAGAAAGAAGGACATCCTGAGGGGTGGTTACTGCCCCCAGGGAAATCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000538035.6
CDS-3UTR GCA 90 bp ATCATGGGAGCAATCCCATTCTCTGGCCTGGAGCATTCTATAATGCTGGCCACAAAGCCTCCGCACCAATaGAATGCCCGGAGCTGCCCG +
Preference number: 4 (lower is better)
Translates to: IMGAIPFSGLEHSIMLATKPPHQ*NARSCP
Trigger: CGGGCAGCTCCGGGCATTGCATTGGTGCGGAGGCTT...TGTGGCCAGCATTATAGAATGCTCCAGGCCAGAGAATGGGATTGCTCCCATGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644411.1
CDS-3UTR GCA 90 bp AATGGCACAATATCTGGGACTGGTTGCAGAAGAATCCAGAGGGAAGTCAGCAGGAAGCCTCCGCACCAATaGAATGCCCGGAGCTGCCCG +
Preference number: 4 (lower is better)
Translates to: NGTISGTGCRRIQREVSRKPPHQ*NARSCP
Trigger: CGGGCAGCTCCGGGCATTGCATTGGTGCGGAGGCTT...CCTGCTGACTTCCCTCTGGATTCTTCTGCAACCAGTCCCAGATATTGTGCCATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644621.1
CDS-3UTR GCA 90 bp ATGGGAGCAATCCCATTCTCTGGCCTGGAGCATTCTATAATGCTGGCCACATGCTCTCCTCTGAAGGGCTaGTGCCTTGTTCCCAGCGCC +
Preference number: 4 (lower is better)
Translates to: MGAIPFSGLEHSIMLATCSPLKG*CLVPSA
Trigger: GGCGCTGGGAACAAGGCAGCAGCCCTTCAGAGGAGA...GCATGTGGCCAGCATTATAGAATGCTCCAGGCCAGAGAATGGGATTGCTCCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR GCA 90 bp GAACTATTTGGCCAGGGAATCCTACCAGTGAGTGATTTCCCTGGGGGCAGTAACTCTCCTCTGAAGGGCTaGTGCCTTGTTCCCAGCGCC +
Preference number: 4 (lower is better)
Translates to: ELFGQGILPVSDFPGGSNSPLKG*CLVPSA
Trigger: GGCGCTGGGAACAAGGCAGCAGCCCTTCAGAGGAGA...GTTACTGCCCCCAGGGAAATCACTCACTGGTAGGATTCCCTGGCCAAATAGTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR GCA 90 bp GCAGCCCTGCTTCCTCTGGAGCTCTGCCTCAAAGGGAACAAGTCCCACCACTTCTTGTCTGGGGAAGGATaGAGCCACCTAAAGAAGGAG +
Preference number: 4 (lower is better)
Translates to: AALLPLELCLKGNKSHHFLSGEG*SHLKKE
Trigger: CTCCTTCTTTAGGTGGCTGCATCCTTCCCCAGACAA...GAAGTGGTGGGACTTGTTCCCTTTGAGGCAGAGCTCCAGAGGAAGCAGGGCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644411.1
CDS-3UTR GCA 90 bp GCAGCCCTGCTTCCTCTGGAGCTCTGCCTCAAAGGGAACAAGTCCCACCACTTCGCCTCCTCAGACTCTTaGAGAAGTGCTTCTGCAACA +
Preference number: 4 (lower is better)
Translates to: AALLPLELCLKGNKSHHFASSDS*RSASAT
Trigger: TGTTGCAGAAGCACTTCTGCAAGAGTCTGAGGAGGC...GAAGTGGTGGGACTTGTTCCCTTTGAGGCAGAGCTCCAGAGGAAGCAGGGCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR GCA 90 bp GCCTCAAAGGGAACAAGTCCCACCACTTCCCTGACCAGGCCCTGGCATCATGGGAGCCTCTTGACCAGCTaGTTTGTGATGTTTCCTTCC +
Preference number: 4 (lower is better)
Translates to: ASKGTSPTTSLTRPWHHGSLLTS*FVMFPS
Trigger: GGAAGGAAACATCACAAAGCAGCTGGTCAAGAGGCT...CCCATGATGCCAGGGCCTGGTCAGGGAAGTGGTGGGACTTGTTCCCTTTGAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR GCA 90 bp GTGATTTCCCTGGGGGCAGTAACCACCCCTCAGGATGTCCTTCTTTCTAATCCCTGTCCAGGCTCTCGTTaGCTGTGGTCAGTGGGAGAG +
Preference number: 4 (lower is better)
Translates to: VISLGAVTTPQDVLLSNPCPGSR*LWSVGE
Trigger: CTCTCCCACTGACCACAGGCAACGAGAGCCTGGACA...GGGATTAGAAAGAAGGACATCCTGAGGGGTGGTTACTGCCCCCAGGGAAATCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR GCA 90 bp GAACTATTTGGCCAGGGAATCCTACCAGTGAGTGATTTCCCTGGGGGCAGTAACGCTGGGCCAGGAGGTTaGTGGGAGCAAGGTCACTCA +
Preference number: 4 (lower is better)
Translates to: ELFGQGILPVSDFPGGSNAGPGG*WEQGHS
Trigger: TGAGTGACCTTGCTCCCAGCAACCTCCTGGCCCAGC...GTTACTGCCCCCAGGGAAATCACTCACTGGTAGGATTCCCTGGCCAAATAGTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR GCA 90 bp GCCTCAAAGGGAACAAGTCCCACCACTTCCCTGACCAGGCCCTGGCATCATGGGAAATATTCAAGAGGATaGTGGGGTGGGTCGAATGGG +
Preference number: 4 (lower is better)
Translates to: ASKGTSPTTSLTRPWHHGKYSRG*WGGSNG
Trigger: CCCATTCGACCCACCCCAGCATCCTCTTGAATATTT...CCCATGATGCCAGGGCCTGGTCAGGGAAGTGGTGGGACTTGTTCCCTTTGAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR GCA 90 bp TTCCCTGACCAGGCCCTGGCATCATGGGAGCAATCCCATTCTCTGGCCTGGAGCAAATATTCAAGAGGATaGTGGGGTGGGTCGAATGGG +
Preference number: 4 (lower is better)
Translates to: FPDQALASWEQSHSLAWSKYSRG*WGGSNG
Trigger: CCCATTCGACCCACCCCAGCATCCTCTTGAATATTT...GCTCCAGGCCAGAGAATGGGATTGCTCCCATGATGCCAGGGCCTGGTCAGGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR CCA 90 bp GAACTATTTGGCCAGGGAATCCTACCAGTGAGTGATTTCCCTGGGGGCAGTAACCTGGATCGCCTTTCCTaGAGGCCGCTGAAACCCGCA +
Preference number: 4 (lower is better)
Translates to: ELFGQGILPVSDFPGGSNLDRLS*RPLKPA
Trigger: TGCGGGTTTCAGCGGCCTCCAGGAAAGGCGATCCAG...GTTACTGCCCCCAGGGAAATCACTCACTGGTAGGATTCCCTGGCCAAATAGTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CCA 90 bp ATGTTTGAACTATTTGGCCAGGGAATCCTACCAGTGAGTGATTTCCCTGGGGGCCCCGGGCAGCTTTGCTaGCAGGGGATGTTGCGAAGG +
Preference number: 4 (lower is better)
Translates to: MFELFGQGILPVSDFPGGPGQLC*QGMLRR
Trigger: CCTTCGCAACATCCCCTGCCAGCAAAGCTGCCCGGG...GCCCCCAGGGAAATCACTCACTGGTAGGATTCCCTGGCCAAATAGTTCAAACAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CCA 90 bp AATGGCACAATATCTGGGACTGGTTGCAGAAGAATCCAGAGGGAAGTCAGCAGGCCCGGGCAGCTTTGCTaGCAGGGGATGTTGCGAAGG +
Preference number: 4 (lower is better)
Translates to: NGTISGTGCRRIQREVSRPGQLC*QGMLRR
Trigger: CCTTCGCAACATCCCCTGCCAGCAAAGCTGCCCGGG...CCTGCTGACTTCCCTCTGGATTCTTCTGCAACCAGTCCCAGATATTGTGCCATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR CCA 90 bp GTGATTTCCCTGGGGGCAGTAACCACCCCTCAGGATGTCCTTCTTTCTAATCCCAGACAGACAGCCGCCTaGGCTTGTCTGGGGAAGGAT +
Preference number: 4 (lower is better)
Translates to: VISLGAVTTPQDVLLSNPRQTAA*ACLGKD
Trigger: ATCCTTCCCCAGACAAGCCCAGGCGGCTGTCTGTCT...GGGATTAGAAAGAAGGACATCCTGAGGGGTGGTTACTGCCCCCAGGGAAATCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000259698.9
ENST00000613507.4
CDS-3UTR CCA 90 bp AAATGGCACAATATCTGGGACTGGTTGCAGAAGAATCCAGAGGGAAGTCAGCAGGGGGAGCCTGTTGAGTaGGAGGTGAGGGCGCAGTCC +
Preference number: 4 (lower is better)
Translates to: KWHNIWDWLQKNPEGSQQGEPVE*EVRAQS
Trigger: GGACTGCGCCCTCACCTCCCACTCAACAGGCTCCCC...CTGCTGACTTCCCTCTGGATTCTTCTGCAACCAGTCCCAGATATTGTGCCATTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR CCA 90 bp CAAGAAGCAGCCCTGCTTCCTCTGGAGCTCTGCCTCAAAGGGAACAAGTCCCACTTTTCTGGGCTCCTCTaGGTCTTCCTCCTTCAGGTG +
Preference number: 4 (lower is better)
Translates to: QEAALLPLELCLKGNKSHFSGLL*VFLLQV
Trigger: CACCTGAAGGAGGAAGACCCAGAGGAGCCCAGAAAA...GTGGGACTTGTTCCCTTTGAGGCAGAGCTCCAGAGGAAGCAGGGCTGCTTCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR CCA 90 bp GTGATTTCCCTGGGGGCAGTAACCACCCCTCAGGATGTCCTTCTTTCTAATCCCCCGAGGCAGGTTTTCTaGGCTCCTCTGGGTCTTCCT +
Preference number: 4 (lower is better)
Translates to: VISLGAVTTPQDVLLSNPPRQVF*APLGLP
Trigger: AGGAAGACCCAGAGGAGCCCAGAAAACCTGCCTCGG...GGGATTAGAAAGAAGGACATCCTGAGGGGTGGTTACTGCCCCCAGGGAAATCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CCA 90 bp GAACTATTTGGCCAGGGAATCCTACCAGTGAGTGATTTCCCTGGGGGCAGTAACGCGGCAAGCCTCAGATaGGGCCGAGGCAGGTTTTCT +
Preference number: 4 (lower is better)
Translates to: ELFGQGILPVSDFPGGSNAASLR*GRGRFS
Trigger: AGAAAACCTGCCTCGGCCCCATCTGAGGCTTGCCGC...GTTACTGCCCCCAGGGAAATCACTCACTGGTAGGATTCCCTGGCCAAATAGTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CCA 90 bp GTGATTTCCCTGGGGGCAGTAACCACCCCTCAGGATGTCCTTCTTTCTAATCCCAGAGCAGCCTGTCTGTaGCCATTGGCACCTCTGCAG +
Preference number: 4 (lower is better)
Translates to: VISLGAVTTPQDVLLSNPRAACL*PLAPLQ
Trigger: CTGCAGAGGTGCCAATGGCCACAGACAGGCTGCTCT...GGGATTAGAAAGAAGGACATCCTGAGGGGTGGTTACTGCCCCCAGGGAAATCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CCA 90 bp ACTTCCCTGACCAGGCCCTGGCATCATGGGAGCAATCCCATTCTCTGGCCTGGAAAGAGGATGCTGGGGTaGGTCGAATGGGACAAATTC +
Preference number: 4 (lower is better)
Translates to: TSLTRPWHHGSNPILWPGKRMLG*VEWDKF
Trigger: GAATTTGTCCCATTCGACCCACCCCAGCATCCTCTT...TCCAGGCCAGAGAATGGGATTGCTCCCATGATGCCAGGGCCTGGTCAGGGAAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR CCA 90 bp CAGCCCTGCTTCCTCTGGAGCTCTGCCTCAAAGGGAACAAGTCCCACCACTTCCTATTCAAGAGGATGCTaGGGTGGGTCGAATGGGACA +
Preference number: 4 (lower is better)
Translates to: QPCFLWSSASKGTSPTTSYSRGC*GGSNGT
Trigger: TGTCCCATTCGACCCACCCCAGCATCCTCTTGAATA...GGAAGTGGTGGGACTTGTTCCCTTTGAGGCAGAGCTCCAGAGGAAGCAGGGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR CCA 90 bp AATGCCTTGGGCATGACAAGAAGCAGCCCTGCTTCCTCTGGAGCTCTGCCTCAACAGGCCCTGGCATCATaGGAGCAATCCCATTCTCTG +
Preference number: 4 (lower is better)
Translates to: NALGMTRSSPASSGALPQQALAS*EQSHSL
Trigger: CAGAGAATGGGATTGCTCCCATGATGCCAGGGCCTG...TTGAGGCAGAGCTCCAGAGGAAGCAGGGCTGCTTCTTGTCATGCCCAAGGCATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000645100.1
ENST00000647136.1
CDS-3UTR CCA 90 bp AGGGCCTTGCAGGGATCTGTCTCTGACACTCAAGATGGCACAAAAGCACATGGGCAGCCCTGCTTCCTCTaGAGCTCTGCCTCAAAGGGA +
Preference number: 4 (lower is better)
Translates to: RALQGSVSDTQDGTKAHGQPCFL*SSASKG
Trigger: TCCCTTTGAGGCAGAGCTCCAGAGGAAGCAGGGCTG...CCCATGTGCTTTTGTGCCATCTTGAGTGTCAGAGACAGATCCCTGCAAGGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR CCA 90 bp GAACTATTTGGCCAGGGAATCCTACCAGTGAGTGATTTCCCTGGGGGCAGTAACAACCCACCAGGGTGGTaGAAGCTGAGGACGCTCCAG +
Preference number: 4 (lower is better)
Translates to: ELFGQGILPVSDFPGGSNNPPGW*KLRTLQ
Trigger: CTGGAGCGTCCTCAGCTTCCACCACCCTGGTGGGTT...GTTACTGCCCCCAGGGAAATCACTCACTGGTAGGATTCCCTGGCCAAATAGTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000538035.6
CDS-3UTR CCA 90 bp ATGTTTGAACTATTTGGCCAGGGAATCCTACCAGTGAGTGATTTCCCTGGGGGCCCCGACCGTACCCTGTaGGCTTCAGATGCCCGAACC +
Preference number: 4 (lower is better)
Translates to: MFELFGQGILPVSDFPGGPDRTL*ASDART
Trigger: GGTTCGGGCATCTGAAGCCCACAGGGTACGGTCGGG...GCCCCCAGGGAAATCACTCACTGGTAGGATTCCCTGGCCAAATAGTTCAAACAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000538035.6
CDS-3UTR TCA 90 bp GGCCATGAGTTGATCACTGAGGAGGTTGAGGGATGGGCACACTGGGATCCATTAGGGATCCTACCAACATaGTTTCCGGGAGTCTGGTCG +
Preference number: 4 (lower is better)
Translates to: GHELITEEVEGWAHWDPLGILPT*FPGVWS
Trigger: CGACCAGACTCCCGGAAATCATGTTGGTAGGATCCC...TAATGGATCCCAGTGTGCCCATCCCTCAACCTCCTCAGTGATCAACTCATGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR TCA 90 bp GCAATCCCATTCTCTGGCCTGGAGCATTCTATAATGCTGGCCACATGCAGAAACTTTCCTGGAGGCCGCTaGAACCCGCAAAGGACTGGC +
Preference number: 4 (lower is better)
Translates to: AIPFSGLEHSIMLATCRNFPGGR*NPQRTG
Trigger: GCCAGTCCTTTGCGGGTTTCAGCGGCCTCCAGGAAA...GTTTCTGCATGTGGCCAGCATTATAGAATGCTCCAGGCCAGAGAATGGGATTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR TCA 90 bp AGAAGCAGCCCTGCTTCCTCTGGAGCTCTGCCTCAAAGGGAACAAGTCCCACCATGGCCTGAGGCTTCTTaGGAGCGGAGGAATTTTCAA +
Preference number: 4 (lower is better)
Translates to: RSSPASSGALPQREQVPPWPEAS*ERRNFQ
Trigger: TTGAAAATTCCTCCGCTCTCAAGAAGCCTCAGGCCA...TGGTGGGACTTGTTCCCTTTGAGGCAGAGCTCCAGAGGAAGCAGGGCTGCTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR TCA 90 bp AGCAGCCCTGCTTCCTCTGGAGCTCTGCCTCAAAGGGAACAAGTCCCACCACTTTCCAGCTCCGTCTGGTaGACCTCCAGATATTCATCA +
Preference number: 4 (lower is better)
Translates to: SSPASSGALPQREQVPPLSSSVW*TSRYSS
Trigger: TGATGAATATCTGGAGGTTCACCAGACGGAGCTGGA...AAGTGGTGGGACTTGTTCCCTTTGAGGCAGAGCTCCAGAGGAAGCAGGGCTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR TCA 90 bp ATGTTTGAACTATTTGGCCAGGGAATCCTACCAGTGAGTGATTTCCCTGGGGGCCTTGTTCCCAGCGCCTaGGGATGCGGTCATGTCCTC +
Preference number: 4 (lower is better)
Translates to: MFELFGQGILPVSDFPGGLVPSA*GCGHVL
Trigger: GAGGACATGACCGCATCCTCAGGCGCTGGGAACAAG...GCCCCCAGGGAAATCACTCACTGGTAGGATTCCCTGGCCAAATAGTTCAAACAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR TCA 90 bp ATGGGAGCAATCCCATTCTCTGGCCTGGAGCATTCTATAATGCTGGCCACATGCAGAAGGAGTGGTCTTTaGAGGTGGGCGTTTCCGGGG +
Preference number: 4 (lower is better)
Translates to: MGAIPFSGLEHSIMLATCRRSGL*RWAFPG
Trigger: CCCCGGAAACGCCCACCTTCAAAGACCACTCCTTCT...GCATGTGGCCAGCATTATAGAATGCTCCAGGCCAGAGAATGGGATTGCTCCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR TCA 90 bp CATGAGTTGATCACTGAGGAGGTTGAGGGATGGGCACACTGGGATCCATTAGAGAGAAGGAGTGGTCTTTaGAGGTGGGCGTTTCCGGGG +
Preference number: 4 (lower is better)
Translates to: HELITEEVEGWAHWDPLERRSGL*RWAFPG
Trigger: CCCCGGAAACGCCCACCTTCAAAGACCACTCCTTCT...CTCTAATGGATCCCAGTGTGCCCATCCCTCAACCTCCTCAGTGATCAACTCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR TCA 90 bp AAAATGGCACAATATCTGGGACTGGTTGCAGAAGAATCCAGAGGGAAGTCAGCACTGTTGAGTGGGAGGTaGGGGCGCAGTCCCCGTTGG +
Preference number: 4 (lower is better)
Translates to: KMAQYLGLVAEESRGKSALLSGR*GRSPRW
Trigger: CCAACGGGGACTGCGCCCTCACCTCCCACTCAACAG...TGCTGACTTCCCTCTGGATTCTTCTGCAACCAGTCCCAGATATTGTGCCATTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR TCA 90 bp AAAATGGCACAATATCTGGGACTGGTTGCAGAAGAATCCAGAGGGAAGTCAGCAGGAAGGGGAGCCTGTTaGGTGGGAGGTGAGGGCGCA +
Preference number: 4 (lower is better)
Translates to: KMAQYLGLVAEESRGKSAGRGAC*VGGEGA
Trigger: TGCGCCCTCACCTCCCACTCAACAGGCTCCCCTTCC...TGCTGACTTCCCTCTGGATTCTTCTGCAACCAGTCCCAGATATTGTGCCATTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR TCA 90 bp GGCCATGAGTTGATCACTGAGGAGGTTGAGGGATGGGCACACTGGGATCCATTACTCATTCACCCTCAGTaGTCTCCGTCCAAGAGGCAG +
Preference number: 4 (lower is better)
Translates to: GHELITEEVEGWAHWDPLLIHPQ*SPSKRQ
Trigger: CTGCCTCTTGGACGGAGATCACTGAGGGTGAATGAG...TAATGGATCCCAGTGTGCCCATCCCTCAACCTCCTCAGTGATCAACTCATGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510784.8
ENST00000540914.5
CDS-3UTR TCA 90 bp CAGCCCTGCTTCCTCTGGAGCTCTGCCTCAAAGGGAACAAGTCCCACCACTTCCCTCCATCCAGTTAGGTaGCACTCCTTGCTGATTTCT +
Preference number: 4 (lower is better)
Translates to: QPCFLWSSASKGTSPTTSLHPVR*HSLLIS
Trigger: AGAAATCAGCAAGGAGTGTCACCTAACTGGATGGAG...GGAAGTGGTGGGACTTGTTCCCTTTGAGGCAGAGCTCCAGAGGAAGCAGGGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR TCA 90 bp GTGATTTCCCTGGGGGCAGTAACCACCCCTCAGGATGTCCTTCTTTCTAATCCCCACTGCCGACCGAGGTaGTTTCCTTTCCTTGGGTTG +
Preference number: 4 (lower is better)
Translates to: VISLGAVTTPQDVLLSNPHCRPR*FPFLGL
Trigger: CAACCCAAGGAAAGGAAATCACCTCGGTCGGCAGTG...GGGATTAGAAAGAAGGACATCCTGAGGGGTGGTTACTGCCCCCAGGGAAATCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000613507.4
CDS-3UTR GCA 90 bp AATGGCACAATATCTGGGACTGGTTGCAGAAGAATCCAGAGGGAAGTCAGCAGGTCTCCTCTGAAGGGCTaGTGCCTTGTTCCCAGCGCC +
Preference number: 4 (lower is better)
Translates to: NGTISGTGCRRIQREVSRSPLKG*CLVPSA
Trigger: GGCGCTGGGAACAAGGCAGCAGCCCTTCAGAGGAGA...CCTGCTGACTTCCCTCTGGATTCTTCTGCAACCAGTCCCAGATATTGTGCCATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR GCA 90 bp GTGATTTCCCTGGGGGCAGTAACCACCCCTCAGGATGTCCTTCTTTCTAATCCCTTCTCAAGGAACAGGTaGTCAGCCCCAGCACCTGAG +
Preference number: 4 (lower is better)
Translates to: VISLGAVTTPQDVLLSNPFSRNR*SAPAPE
Trigger: CTCAGGTGCTGGGGCTGAGCACCTGTTCCTTGAGAA...GGGATTAGAAAGAAGGACATCCTGAGGGGTGGTTACTGCCCCCAGGGAAATCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR GCA 90 bp CAAGAAGCAGCCCTGCTTCCTCTGGAGCTCTGCCTCAAAGGGAACAAGTCCCACGCCTCCTCAGACTCTTaGAGAAGTGCTTCTGCAACA +
Preference number: 4 (lower is better)
Translates to: QEAALLPLELCLKGNKSHASSDS*RSASAT
Trigger: TGTTGCAGAAGCACTTCTGCAAGAGTCTGAGGAGGC...GTGGGACTTGTTCCCTTTGAGGCAGAGCTCCAGAGGAAGCAGGGCTGCTTCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR GCA 90 bp GTGATTTCCCTGGGGGCAGTAACCACCCCTCAGGATGTCCTTCTTTCTAATCCCGGCCATTGGCACCTCTaGAGATGTGAGCCTCTTGAC +
Preference number: 4 (lower is better)
Translates to: VISLGAVTTPQDVLLSNPGHWHL*RCEPLD
Trigger: GTCAAGAGGCTCACATCTGCAGAGGTGCCAATGGCC...GGGATTAGAAAGAAGGACATCCTGAGGGGTGGTTACTGCCCCCAGGGAAATCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR GCA 90 bp GTGATTTCCCTGGGGGCAGTAACCACCCCTCAGGATGTCCTTCTTTCTAATCCCAACTGGAAGACCTGCTaGGGCTTACTGCTGGCTTGC +
Preference number: 4 (lower is better)
Translates to: VISLGAVTTPQDVLLSNPNWKTC*GLLLAC
Trigger: GCAAGCCAGCAGTAAGCCGCAGCAGGTCTTCCAGTT...GGGATTAGAAAGAAGGACATCCTGAGGGGTGGTTACTGCCCCCAGGGAAATCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR GCA 90 bp GTGATTTCCCTGGGGGCAGTAACCACCCCTCAGGATGTCCTTCTTTCTAATCCCGTGCAGTACTGGAGGTaGCTGACGATGGTGATGTCC +
Preference number: 4 (lower is better)
Translates to: VISLGAVTTPQDVLLSNPVQYWR*LTMVMS
Trigger: GGACATCACCATCGTCAGGCACCTCCAGTACTGCAC...GGGATTAGAAAGAAGGACATCCTGAGGGGTGGTTACTGCCCCCAGGGAAATCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR GCA 90 bp TGGATAAAATGGCACAATATCTGGGACTGGTTGCAGAAGAATCCAGAGGGAAGTTCCGCTCGCAGCAGCTaGGGCGCGCGGGGTGAAGTT +
Preference number: 4 (lower is better)
Translates to: WIKWHNIWDWLQKNPEGSSARSS*GARGEV
Trigger: AACTTCACCCCGCGCGCCGCAGCTGCTGCGAGCGGA...ACTTCCCTCTGGATTCTTCTGCAACCAGTCCCAGATATTGTGCCATTTTATCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644621.1
CDS-3UTR CCA 90 bp CAGCCCTGCTTCCTCTGGAGCTCTGCCTCAAAGGGAACAAGTCCCACCACTTCCACACTCAGGGTTCTCTaGCATATAAAAGCCTCCGCA +
Preference number: 4 (lower is better)
Translates to: QPCFLWSSASKGTSPTTSTLRVL*HIKASA
Trigger: TGCGGAGGCTTTTATATGCCAGAGAACCCTGAGTGT...GGAAGTGGTGGGACTTGTTCCCTTTGAGGCAGAGCTCCAGAGGAAGCAGGGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644411.1
CDS-3UTR CCA 90 bp ATGTTTGAACTATTTGGCCAGGGAATCCTACCAGTGAGTGATTTCCCTGGGGGCCTGGATCGCCTTTCCTaGAGGCCGCTGAAACCCGCA +
Preference number: 4 (lower is better)
Translates to: MFELFGQGILPVSDFPGGLDRLS*RPLKPA
Trigger: TGCGGGTTTCAGCGGCCTCCAGGAAAGGCGATCCAG...GCCCCCAGGGAAATCACTCACTGGTAGGATTCCCTGGCCAAATAGTTCAAACAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CCA 90 bp GGCCATGAGTTGATCACTGAGGAGGTTGAGGGATGGGCACACTGGGATCCATTATTGCTGGCACCATCCTaGAGGCGTCGCTGGATACAA +
Preference number: 4 (lower is better)
Translates to: GHELITEEVEGWAHWDPLLLAPS*RRRWIQ
Trigger: TTGTATCCAGCGACGCCTCCAGGATGGTGCCAGCAA...TAATGGATCCCAGTGTGCCCATCCCTCAACCTCCTCAGTGATCAACTCATGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR CCA 90 bp AGGGCCTTGCAGGGATCTGTCTCTGACACTCAAGATGGCACAAAAGCACATGGGTTGCTGGCACCATCCTaGAGGCGTCGCTGGATACAA +
Preference number: 4 (lower is better)
Translates to: RALQGSVSDTQDGTKAHGLLAPS*RRRWIQ
Trigger: TTGTATCCAGCGACGCCTCCAGGATGGTGCCAGCAA...CCCATGTGCTTTTGTGCCATCTTGAGTGTCAGAGACAGATCCCTGCAAGGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR CCA 90 bp ATTCAAGAGGATGCTGGGGTGGGTCGAATGGGACAAATTCTGCAAGTTAGAAGCCCCGGGCAGCTTTGCTaGCAGGGGATGTTGCGAAGG +
Preference number: 4 (lower is better)
Translates to: IQEDAGVGRMGQILQVRSPGQLC*QGMLRR
Trigger: CCTTCGCAACATCCCCTGCCAGCAAAGCTGCCCGGG...GCTTCTAACTTGCAGAATTTGTCCCATTCGACCCACCCCAGCATCCTCTTGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR CCA 90 bp AGAAGCAGCCCTGCTTCCTCTGGAGCTCTGCCTCAAAGGGAACAAGTCCCACCACTGCAAACAGCTCTTTaGTCTCACAGGTCACGCTAC +
Preference number: 4 (lower is better)
Translates to: RSSPASSGALPQREQVPPLQTAL*SHRSRY
Trigger: GTAGCGTGACCTGTGAGACCAAAGAGCTGTTTGCAG...TGGTGGGACTTGTTCCCTTTGAGGCAGAGCTCCAGAGGAAGCAGGGCTGCTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR CCA 90 bp CAAGAAGCAGCCCTGCTTCCTCTGGAGCTCTGCCTCAAAGGGAACAAGTCCCACTACCCTGGCTGTACATaGACATTCTCCTCTGAAGGG +
Preference number: 4 (lower is better)
Translates to: QEAALLPLELCLKGNKSHYPGCT*TFSSEG
Trigger: CCCTTCAGAGGAGAATGTCCATGTACAGCCAGGGTA...GTGGGACTTGTTCCCTTTGAGGCAGAGCTCCAGAGGAAGCAGGGCTGCTTCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR CCA 90 bp AGGGCCTTGCAGGGATCTGTCTCTGACACTCAAGATGGCACAAAAGCACATGGGGAAGCTGAGCGACAGTaGCATTTTCTCCTCGGCTGC +
Preference number: 4 (lower is better)
Translates to: RALQGSVSDTQDGTKAHGEAERQ*HFLLGC
Trigger: GCAGCCGAGGAGAAAATGCCACTGTCGCTCAGCTTC...CCCATGTGCTTTTGTGCCATCTTGAGTGTCAGAGACAGATCCCTGCAAGGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR CCA 90 bp AAAATGGCACAATATCTGGGACTGGTTGCAGAAGAATCCAGAGGGAAGTCAGCAGGGGAGCCTGTTGAGTaGGAGGTGAGGGCGCAGTCC +
Preference number: 4 (lower is better)
Translates to: KMAQYLGLVAEESRGKSAGEPVE*EVRAQS
Trigger: GGACTGCGCCCTCACCTCCCACTCAACAGGCTCCCC...TGCTGACTTCCCTCTGGATTCTTCTGCAACCAGTCCCAGATATTGTGCCATTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR CCA 90 bp GCAGCCCTGCTTCCTCTGGAGCTCTGCCTCAAAGGGAACAAGTCCCACCACTTCCTGGATTTGTTGAGTTaGAAGGGGAGCCTGTTGAGT +
Preference number: 4 (lower is better)
Translates to: AALLPLELCLKGNKSHHFLDLLS*KGSLLS
Trigger: ACTCAACAGGCTCCCCTTCCAACTCAACAAATCCAG...GAAGTGGTGGGACTTGTTCCCTTTGAGGCAGAGCTCCAGAGGAAGCAGGGCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR CCA 90 bp AGAATGAATGCCTTGGGCATGACAAGAAGCAGCCCTGCTTCCTCTGGAGCTCTGTCCATACCCTCATTCTaGGAGGCCAAGCTGCTGAGG +
Preference number: 4 (lower is better)
Translates to: RMNALGMTRSSPASSGALSIPSF*EAKLLR
Trigger: CCTCAGCAGCTTGGCCTCCCAGAATGAGGGTATGGA...CAGAGCTCCAGAGGAAGCAGGGCTGCTTCTTGTCATGCCCAAGGCATTCATTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000645100.1
ENST00000647136.1
CDS-3UTR CCA 90 bp GTGATTTCCCTGGGGGCAGTAACCACCCCTCAGGATGTCCTTCTTTCTAATCCCTCCATACCCTCATTCTaGGAGGCCAAGCTGCTGAGG +
Preference number: 4 (lower is better)
Translates to: VISLGAVTTPQDVLLSNPSIPSF*EAKLLR
Trigger: CCTCAGCAGCTTGGCCTCCCAGAATGAGGGTATGGA...GGGATTAGAAAGAAGGACATCCTGAGGGGTGGTTACTGCCCCCAGGGAAATCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CCA 90 bp GAACTATTTGGCCAGGGAATCCTACCAGTGAGTGATTTCCCTGGGGGCAGTAACCCGAGGCAGGTTTTCTaGGCTCCTCTGGGTCTTCCT +
Preference number: 4 (lower is better)
Translates to: ELFGQGILPVSDFPGGSNPRQVF*APLGLP
Trigger: AGGAAGACCCAGAGGAGCCCAGAAAACCTGCCTCGG...GTTACTGCCCCCAGGGAAATCACTCACTGGTAGGATTCCCTGGCCAAATAGTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CCA 90 bp ATGGGAGCAATCCCATTCTCTGGCCTGGAGCATTCTATAATGCTGGCCACATGCCCGAGGCAGGTTTTCTaGGCTCCTCTGGGTCTTCCT +
Preference number: 4 (lower is better)
Translates to: MGAIPFSGLEHSIMLATCPRQVF*APLGLP
Trigger: AGGAAGACCCAGAGGAGCCCAGAAAACCTGCCTCGG...GCATGTGGCCAGCATTATAGAATGCTCCAGGCCAGAGAATGGGATTGCTCCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR CCA 90 bp GCAATCCCATTCTCTGGCCTGGAGCATTCTATAATGCTGGCCACATGCAGAAACGCGGCAAGCCTCAGATaGGGCCGAGGCAGGTTTTCT +
Preference number: 4 (lower is better)
Translates to: AIPFSGLEHSIMLATCRNAASLR*GRGRFS
Trigger: AGAAAACCTGCCTCGGCCCCATCTGAGGCTTGCCGC...GTTTCTGCATGTGGCCAGCATTATAGAATGCTCCAGGCCAGAGAATGGGATTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR CCA 90 bp ATCATGGGAGCAATCCCATTCTCTGGCCTGGAGCATTCTATAATGCTGGCCACAGCGGCAAGCCTCAGATaGGGCCGAGGCAGGTTTTCT +
Preference number: 4 (lower is better)
Translates to: IMGAIPFSGLEHSIMLATAASLR*GRGRFS
Trigger: AGAAAACCTGCCTCGGCCCCATCTGAGGCTTGCCGC...TGTGGCCAGCATTATAGAATGCTCCAGGCCAGAGAATGGGATTGCTCCCATGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR CCA 90 bp GGCATCATGGGAGCAATCCCATTCTCTGGCCTGGAGCATTCTATAATGCTGGCCCCTGTCTGTGGCCATTaGCACCTCTGCAGATGTGAG +
Preference number: 4 (lower is better)
Translates to: GIMGAIPFSGLEHSIMLAPVCGH*HLCRCE
Trigger: CTCACATCTGCAGAGGTGCCAATGGCCACAGACAGG...GGCCAGCATTATAGAATGCTCCAGGCCAGAGAATGGGATTGCTCCCATGATGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR CCA 90 bp CCTGGCATCATGGGAGCAATCCCATTCTCTGGCCTGGAGCATTCTATAATGCTGAGAGCAGCCTGTCTGTaGCCATTGGCACCTCTGCAG +
Preference number: 4 (lower is better)
Translates to: PGIMGAIPFSGLEHSIMLRAACL*PLAPLQ
Trigger: CTGCAGAGGTGCCAATGGCCACAGACAGGCTGCTCT...CAGCATTATAGAATGCTCCAGGCCAGAGAATGGGATTGCTCCCATGATGCCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR CCA 90 bp GTGATTTCCCTGGGGGCAGTAACCACCCCTCAGGATGTCCTTCTTTCTAATCCCATGCCCCCTGGCTTCTaGGTGAACCGACCTGTAACT +
Preference number: 4 (lower is better)
Translates to: VISLGAVTTPQDVLLSNPMPPGF*VNRPVT
Trigger: AGTTACAGGTCGGTTCACCCAGAAGCCAGGGGGCAT...GGGATTAGAAAGAAGGACATCCTGAGGGGTGGTTACTGCCCCCAGGGAAATCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CCA 90 bp GAACTATTTGGCCAGGGAATCCTACCAGTGAGTGATTTCCCTGGGGGCAGTAACGTTGCCTGTGGTCAGTaGGAGAGGACTTCCTGCCAC +
Preference number: 4 (lower is better)
Translates to: ELFGQGILPVSDFPGGSNVACGQ*ERTSCH
Trigger: GTGGCAGGAAGTCCTCTCCCACTGACCACAGGCAAC...GTTACTGCCCCCAGGGAAATCACTCACTGGTAGGATTCCCTGGCCAAATAGTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CCA 90 bp GTGATTTCCCTGGGGGCAGTAACCACCCCTCAGGATGTCCTTCTTTCTAATCCCGCCCGGTCCAGAATTTaGGACACCAGGGTTCGAAAC +
Preference number: 4 (lower is better)
Translates to: VISLGAVTTPQDVLLSNPARSRI*DTRVRN
Trigger: GTTTCGAACCCTGGTGTCCCAAATTCTGGACCGGGC...GGGATTAGAAAGAAGGACATCCTGAGGGGTGGTTACTGCCCCCAGGGAAATCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CCA 90 bp ACTTCCCTGACCAGGCCCTGGCATCATGGGAGCAATCCCATTCTCTGGCCTGGAAGGAGAGAGCAGCCCTaGAGTTTGTATGCATTCTTG +
Preference number: 4 (lower is better)
Translates to: TSLTRPWHHGSNPILWPGRREQP*SLYAFL
Trigger: CAAGAATGCATACAAACTCCAGGGCTGCTCTCTCCT...TCCAGGCCAGAGAATGGGATTGCTCCCATGATGCCAGGGCCTGGTCAGGGAAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540914.5
CDS-3UTR CCA 90 bp ACTTCCCTGACCAGGCCCTGGCATCATGGGAGCAATCCCATTCTCTGGCCTGGACTGGGGTGGGTCGAATaGGACAAATTCTGCAAGTTA +
Preference number: 4 (lower is better)
Translates to: TSLTRPWHHGSNPILWPGLGWVE*DKFCKL
Trigger: TAACTTGCAGAATTTGTCCCATTCGACCCACCCCAG...TCCAGGCCAGAGAATGGGATTGCTCCCATGATGCCAGGGCCTGGTCAGGGAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR CCA 90 bp TGCTTCCTCTGGAGCTCTGCCTCAAAGGGAACAAGTCCCACCACTTCCCTGACCAAGAGGATGCTGGGGTaGGTCGAATGGGACAAATTC +
Preference number: 4 (lower is better)
Translates to: CFLWSSASKGTSPTTSLTKRMLG*VEWDKF
Trigger: GAATTTGTCCCATTCGACCCACCCCAGCATCCTCTT...GGTCAGGGAAGTGGTGGGACTTGTTCCCTTTGAGGCAGAGCTCCAGAGGAAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR CCA 90 bp AGAAGCAGCCCTGCTTCCTCTGGAGCTCTGCCTCAAAGGGAACAAGTCCCACCATATTCAAGAGGATGCTaGGGTGGGTCGAATGGGACA +
Preference number: 4 (lower is better)
Translates to: RSSPASSGALPQREQVPPYSRGC*GGSNGT
Trigger: TGTCCCATTCGACCCACCCCAGCATCCTCTTGAATA...TGGTGGGACTTGTTCCCTTTGAGGCAGAGCTCCAGAGGAAGCAGGGCTGCTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR CCA 90 bp ACTTCCCTGACCAGGCCCTGGCATCATGGGAGCAATCCCATTCTCTGGCCTGGACAATGCCAGTTGCTATaGGCACAGAGTTGGAGAGAA +
Preference number: 4 (lower is better)
Translates to: TSLTRPWHHGSNPILWPGQCQLL*AQSWRE
Trigger: TTCTCTCCAACTCTGTGCCCATAGCAACTGGCATTG...TCCAGGCCAGAGAATGGGATTGCTCCCATGATGCCAGGGCCTGGTCAGGGAAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR CCA 90 bp ATCATGGGAGCAATCCCATTCTCTGGCCTGGAGCATTCTATAATGCTGGCCACATCCCTGACCAGGCCCTaGCATCATGGGAGCAATCCC +
Preference number: 4 (lower is better)
Translates to: IMGAIPFSGLEHSIMLATSLTRP*HHGSNP
Trigger: GGGATTGCTCCCATGATGCCAGGGCCTGGTCAGGGA...TGTGGCCAGCATTATAGAATGCTCCAGGCCAGAGAATGGGATTGCTCCCATGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR CCA 90 bp ATGGGAGCAATCCCATTCTCTGGCCTGGAGCATTCTATAATGCTGGCCACATGCCAGCCCTGCTTCCTCTaGAGCTCTGCCTCAAAGGGA +
Preference number: 4 (lower is better)
Translates to: MGAIPFSGLEHSIMLATCQPCFL*SSASKG
Trigger: TCCCTTTGAGGCAGAGCTCCAGAGGAAGCAGGGCTG...GCATGTGGCCAGCATTATAGAATGCTCCAGGCCAGAGAATGGGATTGCTCCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
3UTR CAA 72 bp GGGTCTCCCTATGTTGACCATACCGGTCTTGAACTCTaGGGCTCCAGCAATCCTGGGCTTCCCAAAGTGTTG +
Preference number: 4 (lower is better)
Translates to: GSPYVDHTGLEL*GSSNPGLPKVL
Trigger: CAACACTTTGGGAAGCCCAGGATTGCTGGAGCCCAAGAGTTCAAGACCGGTATGGTCAACATAGGGAGACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000645100.1
ENST00000647136.1
CDS-3UTR TCA 90 bp GGGACTGGTTGCAGAAGAATCCAGAGGGAAGTCAGCAGGTTGAAGAATAGGAAATTTCCTGGAGGCCGCTaGAACCCGCAAAGGACTGGC +
Preference number: 4 (lower is better)
Translates to: GTGCRRIQREVSRLKNRKFPGGR*NPQRTG
Trigger: GCCAGTCCTTTGCGGGTTTCAGCGGCCTCCAGGAAA...TTTCCTATTCTTCAACCTGCTGACTTCCCTCTGGATTCTTCTGCAACCAGTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR TCA 90 bp AAATGGCACAATATCTGGGACTGGTTGCAGAAGAATCCAGAGGGAAGTCAGCAGTTTCCTGGAGGCCGCTaGAACCCGCAAAGGACTGGC +
Preference number: 4 (lower is better)
Translates to: KWHNIWDWLQKNPEGSQQFPGGR*NPQRTG
Trigger: GCCAGTCCTTTGCGGGTTTCAGCGGCCTCCAGGAAA...CTGCTGACTTCCCTCTGGATTCTTCTGCAACCAGTCCCAGATATTGTGCCATTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR TCA 90 bp GGGGTGGGTCGAATGGGACAAATTCTGCAAGTTAGAAGCACTAAATGTCCTCCATTTCCTGGAGGCCGCTaGAACCCGCAAAGGACTGGC +
Preference number: 4 (lower is better)
Translates to: GVGRMGQILQVRSTKCPPFPGGR*NPQRTG
Trigger: GCCAGTCCTTTGCGGGTTTCAGCGGCCTCCAGGAAA...TGGAGGACATTTAGTGCTTCTAACTTGCAGAATTTGTCCCATTCGACCCACCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR TCA 90 bp CAGCCCTGCTTCCTCTGGAGCTCTGCCTCAAAGGGAACAAGTCCCACCACTTCCCGGAGGAATTTTCAATaGAGGAGTTACACCTGGATC +
Preference number: 4 (lower is better)
Translates to: QPCFLWSSASKGTSPTTSRRNFQ*RSYTWI
Trigger: GATCCAGGTGTAACTCCTTCATTGAAAATTCCTCCG...GGAAGTGGTGGGACTTGTTCCCTTTGAGGCAGAGCTCCAGAGGAAGCAGGGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR TCA 90 bp GTGATTTCCCTGGGGGCAGTAACCACCCCTCAGGATGTCCTTCTTTCTAATCCCTTCTTCAGTTTGGCCTaGGGCTTCTTGAGAGCGGAG +
Preference number: 4 (lower is better)
Translates to: VISLGAVTTPQDVLLSNPFFSLA*GFLRAE
Trigger: CTCCGCTCTCAAGAAGCCTCAGGCCAAACTGAAGAA...GGGATTAGAAAGAAGGACATCCTGAGGGGTGGTTACTGCCCCCAGGGAAATCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR TCA 90 bp TGCTTCCTCTGGAGCTCTGCCTCAAAGGGAACAAGTCCCACCACTTCCCTGACCCCAGACCTTTCATCTTaGTGGAGAATTCTCCCAGCA +
Preference number: 4 (lower is better)
Translates to: CFLWSSASKGTSPTTSLTPDLSS*WRILPA
Trigger: TGCTGGGAGAATTCTCCATCAAGATGAAAGGTCTGG...GGTCAGGGAAGTGGTGGGACTTGTTCCCTTTGAGGCAGAGCTCCAGAGGAAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR TCA 90 bp GGCATCATGGGAGCAATCCCATTCTCTGGCCTGGAGCATTCTATAATGCTGGCCCTACCTACCAGGATGTaGGTTGCTAGCCCTTTGAGC +
Preference number: 4 (lower is better)
Translates to: GIMGAIPFSGLEHSIMLALPTRM*VASPLS
Trigger: GCTCAAAGGGCTAGCAACTCACATCCTGGTAGGTAG...GGCCAGCATTATAGAATGCTCCAGGCCAGAGAATGGGATTGCTCCCATGATGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR TCA 90 bp ACAATATCTGGGACTGGTTGCAGAAGAATCCAGAGGGAAGTCAGCAGGTTGAAGTCGACAGCCACTACCTaGGGTCGGGCTGCAAACAGC +
Preference number: 4 (lower is better)
Translates to: TISGTGCRRIQREVSRLKSTATT*GRAANS
Trigger: GCTGTTTGCAGCCCGACCTCAGGTAGTGGCTGTCGA...CTTCAACCTGCTGACTTCCCTCTGGATTCTTCTGCAACCAGTCCCAGATATTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR TCA 90 bp GGGGTGGGTCGAATGGGACAAATTCTGCAAGTTAGAAGCACTAAATGTCCTCCATCGACAGCCACTACCTaGGGTCGGGCTGCAAACAGC +
Preference number: 4 (lower is better)
Translates to: GVGRMGQILQVRSTKCPPSTATT*GRAANS
Trigger: GCTGTTTGCAGCCCGACCTCAGGTAGTGGCTGTCGA...TGGAGGACATTTAGTGCTTCTAACTTGCAGAATTTGTCCCATTCGACCCACCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR TCA 90 bp ACAATATCTGGGACTGGTTGCAGAAGAATCCAGAGGGAAGTCAGCAGGTTGAAGCTTGTTCCCAGCGCCTaGGGATGCGGTCATGTCCTC +
Preference number: 4 (lower is better)
Translates to: TISGTGCRRIQREVSRLKLVPSA*GCGHVL
Trigger: GAGGACATGACCGCATCCTCAGGCGCTGGGAACAAG...CTTCAACCTGCTGACTTCCCTCTGGATTCTTCTGCAACCAGTCCCAGATATTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR TCA 90 bp GGGGTGGGTCGAATGGGACAAATTCTGCAAGTTAGAAGCACTAAATGTCCTCCACTTGTTCCCAGCGCCTaGGGATGCGGTCATGTCCTC +
Preference number: 4 (lower is better)
Translates to: GVGRMGQILQVRSTKCPPLVPSA*GCGHVL
Trigger: GAGGACATGACCGCATCCTCAGGCGCTGGGAACAAG...TGGAGGACATTTAGTGCTTCTAACTTGCAGAATTTGTCCCATTCGACCCACCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR TCA 90 bp GGCATCATGGGAGCAATCCCATTCTCTGGCCTGGAGCATTCTATAATGCTGGCCATGGACATTCTCCTCTaGAGGGCTGCTGCCTTGTTC +
Preference number: 4 (lower is better)
Translates to: GIMGAIPFSGLEHSIMLAMDILL*RAAALF
Trigger: GAACAAGGCAGCAGCCCTTCAGAGGAGAATGTCCAT...GGCCAGCATTATAGAATGCTCCAGGCCAGAGAATGGGATTGCTCCCATGATGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR TCA 90 bp GTGATTTCCCTGGGGGCAGTAACCACCCCTCAGGATGTCCTTCTTTCTAATCCCATGGACATTCTCCTCTaGAGGGCTGCTGCCTTGTTC +
Preference number: 4 (lower is better)
Translates to: VISLGAVTTPQDVLLSNPMDILL*RAAALF
Trigger: GAACAAGGCAGCAGCCCTTCAGAGGAGAATGTCCAT...GGGATTAGAAAGAAGGACATCCTGAGGGGTGGTTACTGCCCCCAGGGAAATCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR TCA 90 bp AGGGCCTTGCAGGGATCTGTCTCTGACACTCAAGATGGCACAAAAGCACATGGGATGGACATTCTCCTCTaGAGGGCTGCTGCCTTGTTC +
Preference number: 4 (lower is better)
Translates to: RALQGSVSDTQDGTKAHGMDILL*RAAALF
Trigger: GAACAAGGCAGCAGCCCTTCAGAGGAGAATGTCCAT...CCCATGTGCTTTTGTGCCATCTTGAGTGTCAGAGACAGATCCCTGCAAGGCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR TCA 90 bp TGGATAAAATGGCACAATATCTGGGACTGGTTGCAGAAGAATCCAGAGGGAAGTCTGTTGAGTGGGAGGTaGGGGCGCAGTCCCCGTTGG +
Preference number: 4 (lower is better)
Translates to: WIKWHNIWDWLQKNPEGSLLSGR*GRSPRW
Trigger: CCAACGGGGACTGCGCCCTCACCTCCCACTCAACAG...ACTTCCCTCTGGATTCTTCTGCAACCAGTCCCAGATATTGTGCCATTTTATCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR TCA 90 bp ATAAAATGGCACAATATCTGGGACTGGTTGCAGAAGAATCCAGAGGGAAGTCAGGGAAGGGGAGCCTGTTaGGTGGGAGGTGAGGGCGCA +
Preference number: 4 (lower is better)
Translates to: IKWHNIWDWLQKNPEGSQGRGAC*VGGEGA
Trigger: TGCGCCCTCACCTCCCACTCAACAGGCTCCCCTTCC...CTGACTTCCCTCTGGATTCTTCTGCAACCAGTCCCAGATATTGTGCCATTTTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR TCA 90 bp ATATTCAAGAGGATGCTGGGGTGGGTCGAATGGGACAAATTCTGCAAGTTAGAAGGAAGGGGAGCCTGTTaGGTGGGAGGTGAGGGCGCA +
Preference number: 4 (lower is better)
Translates to: IFKRMLGWVEWDKFCKLEGRGAC*VGGEGA
Trigger: TGCGCCCTCACCTCCCACTCAACAGGCTCCCCTTCC...TTCTAACTTGCAGAATTTGTCCCATTCGACCCACCCCAGCATCCTCTTGAATAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR TCA 90 bp CAGCCCTGCTTCCTCTGGAGCTCTGCCTCAAAGGGAACAAGTCCCACCACTTCCAATTTCTGGATTTGTTaGGTTGGAAGGGGAGCCTGT +
Preference number: 4 (lower is better)
Translates to: QPCFLWSSASKGTSPTTSNFWIC*VGRGAC
Trigger: ACAGGCTCCCCTTCCAACTCAACAAATCCAGAAATT...GGAAGTGGTGGGACTTGTTCCCTTTGAGGCAGAGCTCCAGAGGAAGCAGGGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR TCA 90 bp GTGATTTCCCTGGGGGCAGTAACCACCCCTCAGGATGTCCTTCTTTCTAATCCCGTTCCTGGAAGATGCTaGGCTGGTGTCATCCATACC +
Preference number: 4 (lower is better)
Translates to: VISLGAVTTPQDVLLSNPVPGRC*AGVIHT
Trigger: GGTATGGATGACACCAGCTCAGCATCTTCCAGGAAC...GGGATTAGAAAGAAGGACATCCTGAGGGGTGGTTACTGCCCCCAGGGAAATCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR TCA 90 bp AGGGCCTTGCAGGGATCTGTCTCTGACACTCAAGATGGCACAAAAGCACATGGGGTTCCTGGAAGATGCTaGGCTGGTGTCATCCATACC +
Preference number: 4 (lower is better)
Translates to: RALQGSVSDTQDGTKAHGVPGRC*AGVIHT
Trigger: GGTATGGATGACACCAGCTCAGCATCTTCCAGGAAC...CCCATGTGCTTTTGTGCCATCTTGAGTGTCAGAGACAGATCCCTGCAAGGCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR TCA 90 bp GTGATTTCCCTGGGGGCAGTAACCACCCCTCAGGATGTCCTTCTTTCTAATCCCTTCCTCCTTCAGGTGTaGCTTTGGCTCTTGGCCTTC +
Preference number: 4 (lower is better)
Translates to: VISLGAVTTPQDVLLSNPFLLQV*LWLLAF
Trigger: GAAGGCCAAGAGCCAAAGTCACACCTGAAGGAGGAA...GGGATTAGAAAGAAGGACATCCTGAGGGGTGGTTACTGCCCCCAGGGAAATCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR TCA 90 bp GATATGTACACGATAAGTTCACAGTTGAAAGAACCATTTGCCAGAAGCCTGGCACTCAGCCCCAGCACCTaGGGACTGTCGGCGGCAAGC +
Preference number: 4 (lower is better)
Translates to: DMYTISSQLKEPFARSLALSPST*GLSAAS
Trigger: GCTTGCCGCCGACAGTCCTCAGGTGCTGGGGCTGAG...TGCCAGGCTTCTGGCAAATGGTTCTTTCAACTGTGAACTTATCGTGTACATATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR TCA 90 bp CCTGGCATCATGGGAGCAATCCCATTCTCTGGCCTGGAGCATTCTATAATGCTGCTCATTCACCCTCAGTaGTCTCCGTCCAAGAGGCAG +
Preference number: 4 (lower is better)
Translates to: PGIMGAIPFSGLEHSIMLLIHPQ*SPSKRQ
Trigger: CTGCCTCTTGGACGGAGATCACTGAGGGTGAATGAG...CAGCATTATAGAATGCTCCAGGCCAGAGAATGGGATTGCTCCCATGATGCCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR GCA 90 bp ACAATATCTGGGACTGGTTGCAGAAGAATCCAGAGGGAAGTCAGCAGGTTGAAGTCTCCCGGGCAGCTTTaGTGGCAGGGGATGTTGCGA +
Preference number: 4 (lower is better)
Translates to: TISGTGCRRIQREVSRLKSPGQL*WQGMLR
Trigger: TCGCAACATCCCCTGCCAGCAAAGCTGCCCGGGAGA...CTTCAACCTGCTGACTTCCCTCTGGATTCTTCTGCAACCAGTCCCAGATATTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR GCA 90 bp AGCAGCCCTGCTTCCTCTGGAGCTCTGCCTCAAAGGGAACAAGTCCCACCACTTTTCAGTTTCCACCGCTaGCGGCCATACTTCATGAAA +
Preference number: 4 (lower is better)
Translates to: SSPASSGALPQREQVPPLFSFHR*RPYFMK
Trigger: TTTCATGAAGTATGGCCGGCAGCGGTGGAAACTGAA...AAGTGGTGGGACTTGTTCCCTTTGAGGCAGAGCTCCAGAGGAAGCAGGGCTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR GCA 90 bp TTCCCTGACCAGGCCCTGGCATCATGGGAGCAATCCCATTCTCTGGCCTGGAGCCATCCCAGCTCTGCTTaGCATTTACTTCTATTTTGC +
Preference number: 4 (lower is better)
Translates to: FPDQALASWEQSHSLAWSHPSSA*HLLLFC
Trigger: GCAAAATAGAAGTAAATGGCAAGCAGAGCTGGGATG...GCTCCAGGCCAGAGAATGGGATTGCTCCCATGATGCCAGGGCCTGGTCAGGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR GCA 90 bp ATGGGAGCAATCCCATTCTCTGGCCTGGAGCATTCTATAATGCTGGCCACATGCGGCCATTGGCACCTCTaGAGATGTGAGCCTCTTGAC +
Preference number: 4 (lower is better)
Translates to: MGAIPFSGLEHSIMLATCGHWHL*RCEPLD
Trigger: GTCAAGAGGCTCACATCTGCAGAGGTGCCAATGGCC...GCATGTGGCCAGCATTATAGAATGCTCCAGGCCAGAGAATGGGATTGCTCCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR GCA 90 bp CAGCCCTGCTTCCTCTGGAGCTCTGCCTCAAAGGGAACAAGTCCCACCACTTCCCATCTAGAAAGGATCTaGAGCCTTCAGATTCTCCAC +
Preference number: 4 (lower is better)
Translates to: QPCFLWSSASKGTSPTTSHLERI*SLQILH
Trigger: GTGGAGAATCTGAAGGCTGCAGATCCTTTCTAGATG...GGAAGTGGTGGGACTTGTTCCCTTTGAGGCAGAGCTCCAGAGGAAGCAGGGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR GCA 90 bp ATGTTTGAACTATTTGGCCAGGGAATCCTACCAGTGAGTGATTTCCCTGGGGGCGTCCTGAGTACTTCCTaGTGGGCCAGGAGGTTGCTG +
Preference number: 4 (lower is better)
Translates to: MFELFGQGILPVSDFPGGVLSTS*WARRLL
Trigger: CAGCAACCTCCTGGCCCAGCAGGAAGTACTCAGGAC...GCCCCCAGGGAAATCACTCACTGGTAGGATTCCCTGGCCAAATAGTTCAAACAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR GCA 90 bp GAACTATTTGGCCAGGGAATCCTACCAGTGAGTGATTTCCCTGGGGGCAGTAACCAGAGCCAGGCAAGCTaGTTTCTGGAGCTGGAGGTT +
Preference number: 4 (lower is better)
Translates to: ELFGQGILPVSDFPGGSNQSQAS*FLELEV
Trigger: AACCTCCAGCTCCAGAAAGCAGCTTGCCTGGCTCTG...GTTACTGCCCCCAGGGAAATCACTCACTGGTAGGATTCCCTGGCCAAATAGTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR GCA 90 bp GTGATTTCCCTGGGGGCAGTAACCACCCCTCAGGATGTCCTTCTTTCTAATCCCTCACCCAGTCTGGAGTaGAGTGGGGCAATTATGGCT +
Preference number: 4 (lower is better)
Translates to: VISLGAVTTPQDVLLSNPSPSLE*SGAIMA
Trigger: AGCCATAATTGCCCCACTGCACTCCAGACTGGGTGA...GGGATTAGAAAGAAGGACATCCTGAGGGGTGGTTACTGCCCCCAGGGAAATCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR GCA 90 bp AGAAGCAGCCCTGCTTCCTCTGGAGCTCTGCCTCAAAGGGAACAAGTCCCACCAAAATATTCAAGAGGATaGTGGGGTGGGTCGAATGGG +
Preference number: 4 (lower is better)
Translates to: RSSPASSGALPQREQVPPKYSRG*WGGSNG
Trigger: CCCATTCGACCCACCCCAGCATCCTCTTGAATATTT...TGGTGGGACTTGTTCCCTTTGAGGCAGAGCTCCAGAGGAAGCAGGGCTGCTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR GCA 90 bp GGCATCATGGGAGCAATCCCATTCTCTGGCCTGGAGCATTCTATAATGCTGGCCCTTCCTCTGGAGCTCTaGCTCAAAGGGAACAAGTCC +
Preference number: 4 (lower is better)
Translates to: GIMGAIPFSGLEHSIMLALPLEL*LKGNKS
Trigger: GGACTTGTTCCCTTTGAGGCAGAGCTCCAGAGGAAG...GGCCAGCATTATAGAATGCTCCAGGCCAGAGAATGGGATTGCTCCCATGATGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR GCA 90 bp AGGGCCTTGCAGGGATCTGTCTCTGACACTCAAGATGGCACAAAAGCACATGGGCTTCCTCTGGAGCTCTaGCTCAAAGGGAACAAGTCC +
Preference number: 4 (lower is better)
Translates to: RALQGSVSDTQDGTKAHGLPLEL*LKGNKS
Trigger: GGACTTGTTCCCTTTGAGGCAGAGCTCCAGAGGAAG...CCCATGTGCTTTTGTGCCATCTTGAGTGTCAGAGACAGATCCCTGCAAGGCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR GCA 90 bp GCAATCCCATTCTCTGGCCTGGAGCATTCTATAATGCTGGCCACATGCAGAAACGACAAGAAGCAGCCCTaGTTCCTCTGGAGCTCTGCC +
Preference number: 4 (lower is better)
Translates to: AIPFSGLEHSIMLATCRNDKKQP*FLWSSA
Trigger: GGCAGAGCTCCAGAGGAAGCAGGGCTGCTTCTTGTC...GTTTCTGCATGTGGCCAGCATTATAGAATGCTCCAGGCCAGAGAATGGGATTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR GCA 90 bp GCCTCAAAGGGAACAAGTCCCACCACTTCCCTGACCAGGCCCTGGCATCATGGGATGAGCCACCGCACCTaGTCACAGCATATAATTTTT +
Preference number: 4 (lower is better)
Translates to: ASKGTSPTTSLTRPWHHGMSHRT*SQHIIF
Trigger: AAAAATTATATGCTGTGAGCAGGTGCGGTGGCTCAT...CCCATGATGCCAGGGCCTGGTCAGGGAAGTGGTGGGACTTGTTCCCTTTGAGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000645100.1
ENST00000647136.1
CDS-3UTR GCA 90 bp GTGATTTCCCTGGGGGCAGTAACCACCCCTCAGGATGTCCTTCTTTCTAATCCCTCCTTCAGTTCTGCTTaGAAAAAGTGCGCGTGCCCC +
Preference number: 4 (lower is better)
Translates to: VISLGAVTTPQDVLLSNPSFSSA*KKCACP
Trigger: GGGGCACGCGCACTTTTTGCAAGCAGAACTGAAGGA...GGGATTAGAAAGAAGGACATCCTGAGGGGTGGTTACTGCCCCCAGGGAAATCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000538035.6
CDS-3UTR CCA 90 bp GCAGCCCTGCTTCCTCTGGAGCTCTGCCTCAAAGGGAACAAGTCCCACCACTTCAAACCCGCAAAGGACTaGCTTCTAATGATCCCATTG +
Preference number: 4 (lower is better)
Translates to: AALLPLELCLKGNKSHHFKPAKD*LLMIPL
Trigger: CAATGGGATCATTAGAAGCCAGTCCTTTGCGGGTTT...GAAGTGGTGGGACTTGTTCCCTTTGAGGCAGAGCTCCAGAGGAAGCAGGGCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR CCA 90 bp GGGACTGGTTGCAGAAGAATCCAGAGGGAAGTCAGCAGGTTGAAGAATAGGAAACTGGATCGCCTTTCCTaGAGGCCGCTGAAACCCGCA +
Preference number: 4 (lower is better)
Translates to: GTGCRRIQREVSRLKNRKLDRLS*RPLKPA
Trigger: TGCGGGTTTCAGCGGCCTCCAGGAAAGGCGATCCAG...TTTCCTATTCTTCAACCTGCTGACTTCCCTCTGGATTCTTCTGCAACCAGTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR CCA 90 bp ATTCAAGAGGATGCTGGGGTGGGTCGAATGGGACAAATTCTGCAAGTTAGAAGCCTGGATCGCCTTTCCTaGAGGCCGCTGAAACCCGCA +
Preference number: 4 (lower is better)
Translates to: IQEDAGVGRMGQILQVRSLDRLS*RPLKPA
Trigger: TGCGGGTTTCAGCGGCCTCCAGGAAAGGCGATCCAG...GCTTCTAACTTGCAGAATTTGTCCCATTCGACCCACCCCAGCATCCTCTTGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR CCA 90 bp AAATGGCACAATATCTGGGACTGGTTGCAGAAGAATCCAGAGGGAAGTCAGCAGCTGGATCGCCTTTCCTaGAGGCCGCTGAAACCCGCA +
Preference number: 4 (lower is better)
Translates to: KWHNIWDWLQKNPEGSQQLDRLS*RPLKPA
Trigger: TGCGGGTTTCAGCGGCCTCCAGGAAAGGCGATCCAG...CTGCTGACTTCCCTCTGGATTCTTCTGCAACCAGTCCCAGATATTGTGCCATTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR CCA 90 bp GTGATTTCCCTGGGGGCAGTAACCACCCCTCAGGATGTCCTTCTTTCTAATCCCCTTGCTTCATTTTGCTaGCACCATCCTGGAGGCGTC +
Preference number: 4 (lower is better)
Translates to: VISLGAVTTPQDVLLSNPLASFC*HHPGGV
Trigger: GACGCCTCCAGGATGGTGCCAGCAAAATGAAGCAAG...GGGATTAGAAAGAAGGACATCCTGAGGGGTGGTTACTGCCCCCAGGGAAATCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CCA 90 bp AGAATGAATGCCTTGGGCATGACAAGAAGCAGCCCTGCTTCCTCTGGAGCTCTGCTTGCTTCATTTTGCTaGCACCATCCTGGAGGCGTC +
Preference number: 4 (lower is better)
Translates to: RMNALGMTRSSPASSGALLASFC*HHPGGV
Trigger: GACGCCTCCAGGATGGTGCCAGCAAAATGAAGCAAG...CAGAGCTCCAGAGGAAGCAGGGCTGCTTCTTGTCATGCCCAAGGCATTCATTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000645100.1
ENST00000647136.1
CDS-3UTR CCA 90 bp GCCTCAAAGGGAACAAGTCCCACCACTTCCCTGACCAGGCCCTGGCATCATGGGCTAGCTCCACTTCAATaGTGCACATATTCTCTGTGT +
Preference number: 4 (lower is better)
Translates to: ASKGTSPTTSLTRPWHHGLAPLQ*CTYSLC
Trigger: ACACAGAGAATATGTGCACCATTGAAGTGGAGCTAG...CCCATGATGCCAGGGCCTGGTCAGGGAAGTGGTGGGACTTGTTCCCTTTGAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR CCA 90 bp GGCCATGAGTTGATCACTGAGGAGGTTGAGGGATGGGCACACTGGGATCCATTAGTTTCCGGGGTACCCTaGCTGTACATGGACATTCTC +
Preference number: 4 (lower is better)
Translates to: GHELITEEVEGWAHWDPLVSGVP*LYMDIL
Trigger: GAGAATGTCCATGTACAGCCAGGGTACCCCGGAAAC...TAATGGATCCCAGTGTGCCCATCCCTCAACCTCCTCAGTGATCAACTCATGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR CCA 90 bp GTGATTTCCCTGGGGGCAGTAACCACCCCTCAGGATGTCCTTCTTTCTAATCCCGGCTGCGGTGCAGCTTaGCAAAGAAAGTGTCTTGCA +
Preference number: 4 (lower is better)
Translates to: VISLGAVTTPQDVLLSNPGCGAA*QRKCLA
Trigger: TGCAAGACACTTTCTTTGCCAAGCTGCACCGCAGCC...GGGATTAGAAAGAAGGACATCCTGAGGGGTGGTTACTGCCCCCAGGGAAATCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000259698.9
ENST00000613507.4
CDS-3UTR CCA 90 bp TGGATAAAATGGCACAATATCTGGGACTGGTTGCAGAAGAATCCAGAGGGAAGTGGGGAGCCTGTTGAGTaGGAGGTGAGGGCGCAGTCC +
Preference number: 4 (lower is better)
Translates to: WIKWHNIWDWLQKNPEGSGEPVE*EVRAQS
Trigger: GGACTGCGCCCTCACCTCCCACTCAACAGGCTCCCC...ACTTCCCTCTGGATTCTTCTGCAACCAGTCCCAGATATTGTGCCATTTTATCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR CCA 90 bp GATAAAATGGCACAATATCTGGGACTGGTTGCAGAAGAATCCAGAGGGAAGTCAGGGGAGCCTGTTGAGTaGGAGGTGAGGGCGCAGTCC +
Preference number: 4 (lower is better)
Translates to: DKMAQYLGLVAEESRGKSGEPVE*EVRAQS
Trigger: GGACTGCGCCCTCACCTCCCACTCAACAGGCTCCCC...TGACTTCCCTCTGGATTCTTCTGCAACCAGTCCCAGATATTGTGCCATTTTATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR CCA 90 bp AAGGGAACAAGTCCCACCACTTCCCTGACCAGGCCCTGGCATCATGGGAGCAATCTGGATTTGTTGAGTTaGAAGGGGAGCCTGTTGAGT +
Preference number: 4 (lower is better)
Translates to: KGTSPTTSLTRPWHHGSNLDLLS*KGSLLS
Trigger: ACTCAACAGGCTCCCCTTCCAACTCAACAAATCCAG...ATTGCTCCCATGATGCCAGGGCCTGGTCAGGGAAGTGGTGGGACTTGTTCCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR CCA 90 bp AGCAGCCCTGCTTCCTCTGGAGCTCTGCCTCAAAGGGAACAAGTCCCACCACTTCTGGATTTGTTGAGTTaGAAGGGGAGCCTGTTGAGT +
Preference number: 4 (lower is better)
Translates to: SSPASSGALPQREQVPPLLDLLS*KGSLLS
Trigger: ACTCAACAGGCTCCCCTTCCAACTCAACAAATCCAG...AAGTGGTGGGACTTGTTCCCTTTGAGGCAGAGCTCCAGAGGAAGCAGGGCTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR CCA 90 bp CATGAGTTGATCACTGAGGAGGTTGAGGGATGGGCACACTGGGATCCATTAGAGTCCATACCCTCATTCTaGGAGGCCAAGCTGCTGAGG +
Preference number: 4 (lower is better)
Translates to: HELITEEVEGWAHWDPLESIPSF*EAKLLR
Trigger: CCTCAGCAGCTTGGCCTCCCAGAATGAGGGTATGGA...CTCTAATGGATCCCAGTGTGCCCATCCCTCAACCTCCTCAGTGATCAACTCATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR CCA 90 bp AAGGGAACAAGTCCCACCACTTCCCTGACCAGGCCCTGGCATCATGGGAGCAATTGGAAGATGCTGAGCTaGTGTCATCCATACCCTCAT +
Preference number: 4 (lower is better)
Translates to: KGTSPTTSLTRPWHHGSNWKMLS*CHPYPH
Trigger: ATGAGGGTATGGATGACACCAGCTCAGCATCTTCCA...ATTGCTCCCATGATGCCAGGGCCTGGTCAGGGAAGTGGTGGGACTTGTTCCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR CCA 90 bp TGCTTCCTCTGGAGCTCTGCCTCAAAGGGAACAAGTCCCACCACTTCCCTGACCTGGAAGATGCTGAGCTaGTGTCATCCATACCCTCAT +
Preference number: 4 (lower is better)
Translates to: CFLWSSASKGTSPTTSLTWKMLS*CHPYPH
Trigger: ATGAGGGTATGGATGACACCAGCTCAGCATCTTCCA...GGTCAGGGAAGTGGTGGGACTTGTTCCCTTTGAGGCAGAGCTCCAGAGGAAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR CCA 90 bp GAACTATTTGGCCAGGGAATCCTACCAGTGAGTGATTTCCCTGGGGGCAGTAACCTCCCAGGGAGTTCCTaGAAGATGCTGAGCTGGTGT +
Preference number: 4 (lower is better)
Translates to: ELFGQGILPVSDFPGGSNLPGSS*KMLSWC
Trigger: ACACCAGCTCAGCATCTTCCAGGAACTCCCTGGGAG...GTTACTGCCCCCAGGGAAATCACTCACTGGTAGGATTCCCTGGCCAAATAGTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CCA 90 bp CCTGGCATCATGGGAGCAATCCCATTCTCTGGCCTGGAGCATTCTATAATGCTGCTCCCAGGGAGTTCCTaGAAGATGCTGAGCTGGTGT +
Preference number: 4 (lower is better)
Translates to: PGIMGAIPFSGLEHSIMLLPGSS*KMLSWC
Trigger: ACACCAGCTCAGCATCTTCCAGGAACTCCCTGGGAG...CAGCATTATAGAATGCTCCAGGCCAGAGAATGGGATTGCTCCCATGATGCCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR CCA 90 bp GTGATTTCCCTGGGGGCAGTAACCACCCCTCAGGATGTCCTTCTTTCTAATCCCTTTTCTGGGCTCCTCTaGGTCTTCCTCCTTCAGGTG +
Preference number: 4 (lower is better)
Translates to: VISLGAVTTPQDVLLSNPFSGLL*VFLLQV
Trigger: CACCTGAAGGAGGAAGACCCAGAGGAGCCCAGAAAA...GGGATTAGAAAGAAGGACATCCTGAGGGGTGGTTACTGCCCCCAGGGAAATCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CCA 90 bp AGGGCCTTGCAGGGATCTGTCTCTGACACTCAAGATGGCACAAAAGCACATGGGTTTTCTGGGCTCCTCTaGGTCTTCCTCCTTCAGGTG +
Preference number: 4 (lower is better)
Translates to: RALQGSVSDTQDGTKAHGFSGLL*VFLLQV
Trigger: CACCTGAAGGAGGAAGACCCAGAGGAGCCCAGAAAA...CCCATGTGCTTTTGTGCCATCTTGAGTGTCAGAGACAGATCCCTGCAAGGCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR CCA 90 bp AATGGCACAATATCTGGGACTGGTTGCAGAAGAATCCAGAGGGAAGTCAGCAGGCCGAGGCAGGTTTTCTaGGCTCCTCTGGGTCTTCCT +
Preference number: 4 (lower is better)
Translates to: NGTISGTGCRRIQREVSRPRQVF*APLGLP
Trigger: AGGAAGACCCAGAGGAGCCCAGAAAACCTGCCTCGG...CCTGCTGACTTCCCTCTGGATTCTTCTGCAACCAGTCCCAGATATTGTGCCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR CCA 90 bp GTGATTTCCCTGGGGGCAGTAACCACCCCTCAGGATGTCCTTCTTTCTAATCCCATTTGCTGCACGAGTTaGGTGCAGTACTGGAGGTGC +
Preference number: 4 (lower is better)
Translates to: VISLGAVTTPQDVLLSNPICCTS*VQYWRC
Trigger: GCACCTCCAGTACTGCACCCAACTCGTGCAGCAAAT...GGGATTAGAAAGAAGGACATCCTGAGGGGTGGTTACTGCCCCCAGGGAAATCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CCA 90 bp GAACTATTTGGCCAGGGAATCCTACCAGTGAGTGATTTCCCTGGGGGCAGTAACCCATGGAAACTTGCCTaGCCAGCTGGCTCAGGTAAC +
Preference number: 4 (lower is better)
Translates to: ELFGQGILPVSDFPGGSNPWKLA*PAGSGN
Trigger: GTTACCTGAGCCAGCTGGCCAGGCAAGTTTCCATGG...GTTACTGCCCCCAGGGAAATCACTCACTGGTAGGATTCCCTGGCCAAATAGTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CCA 90 bp ATGTTTGAACTATTTGGCCAGGGAATCCTACCAGTGAGTGATTTCCCTGGGGGCCTGAGTACTTCCTGCTaGGCCAGGAGGTTGCTGGGA +
Preference number: 4 (lower is better)
Translates to: MFELFGQGILPVSDFPGGLSTSC*ARRLLG
Trigger: TCCCAGCAACCTCCTGGCCCAGCAGGAAGTACTCAG...GCCCCCAGGGAAATCACTCACTGGTAGGATTCCCTGGCCAAATAGTTCAAACAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CCA 90 bp GCCTCAAAGGGAACAAGTCCCACCACTTCCCTGACCAGGCCCTGGCATCATGGGTTTGAAAAGAAGGAGTaGTCTTTGAAGGTGGGCGTT +
Preference number: 4 (lower is better)
Translates to: ASKGTSPTTSLTRPWHHGFEKKE*SLKVGV
Trigger: AACGCCCACCTTCAAAGACCACTCCTTCTTTTCAAA...CCCATGATGCCAGGGCCTGGTCAGGGAAGTGGTGGGACTTGTTCCCTTTGAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000645100.1
ENST00000647136.1
CDS-3UTR CCA 90 bp ACTTCCCTGACCAGGCCCTGGCATCATGGGAGCAATCCCATTCTCTGGCCTGGACACAATATCTGGGACTaGTTGCAGAAGAATCCAGAG +
Preference number: 4 (lower is better)
Translates to: TSLTRPWHHGSNPILWPGHNIWD*LQKNPE
Trigger: CTCTGGATTCTTCTGCAACCAGTCCCAGATATTGTG...TCCAGGCCAGAGAATGGGATTGCTCCCATGATGCCAGGGCCTGGTCAGGGAAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510784.8
ENST00000540914.5
CDS-3UTR CCA 90 bp AACAAGTCCCACCACTTCCCTGACCAGGCCCTGGCATCATGGGAGCAATCCCATCTGGGGTGGGTCGAATaGGACAAATTCTGCAAGTTA +
Preference number: 4 (lower is better)
Translates to: NKSHHFPDQALASWEQSHLGWVE*DKFCKL
Trigger: TAACTTGCAGAATTTGTCCCATTCGACCCACCCCAG...ATGGGATTGCTCCCATGATGCCAGGGCCTGGTCAGGGAAGTGGTGGGACTTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR CCA 90 bp TGCTTCCTCTGGAGCTCTGCCTCAAAGGGAACAAGTCCCACCACTTCCCTGACCCAATGCCAGTTGCTATaGGCACAGAGTTGGAGAGAA +
Preference number: 4 (lower is better)
Translates to: CFLWSSASKGTSPTTSLTQCQLL*AQSWRE
Trigger: TTCTCTCCAACTCTGTGCCCATAGCAACTGGCATTG...GGTCAGGGAAGTGGTGGGACTTGTTCCCTTTGAGGCAGAGCTCCAGAGGAAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR TCA 90 bp AAAATGGCACAATATCTGGGACTGGTTGCAGAAGAATCCAGAGGGAAGTCAGCATTTCCTGGAGGCCGCTaGAACCCGCAAAGGACTGGC +
Preference number: 4 (lower is better)
Translates to: KMAQYLGLVAEESRGKSAFPGGR*NPQRTG
Trigger: GCCAGTCCTTTGCGGGTTTCAGCGGCCTCCAGGAAA...TGCTGACTTCCCTCTGGATTCTTCTGCAACCAGTCCCAGATATTGTGCCATTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR TCA 90 bp AGCAGCCCTGCTTCCTCTGGAGCTCTGCCTCAAAGGGAACAAGTCCCACCACTTCGGAGGAATTTTCAATaGAGGAGTTACACCTGGATC +
Preference number: 4 (lower is better)
Translates to: SSPASSGALPQREQVPPLRRNFQ*RSYTWI
Trigger: GATCCAGGTGTAACTCCTTCATTGAAAATTCCTCCG...AAGTGGTGGGACTTGTTCCCTTTGAGGCAGAGCTCCAGAGGAAGCAGGGCTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR TCA 90 bp GGCATCATGGGAGCAATCCCATTCTCTGGCCTGGAGCATTCTATAATGCTGGCCTGGCCTGAGGCTTCTTaGGAGCGGAGGAATTTTCAA +
Preference number: 4 (lower is better)
Translates to: GIMGAIPFSGLEHSIMLAWPEAS*ERRNFQ
Trigger: TTGAAAATTCCTCCGCTCTCAAGAAGCCTCAGGCCA...GGCCAGCATTATAGAATGCTCCAGGCCAGAGAATGGGATTGCTCCCATGATGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR TCA 90 bp ATGGGAGCAATCCCATTCTCTGGCCTGGAGCATTCTATAATGCTGGCCACATGCTTCTTCAGTTTGGCCTaGGGCTTCTTGAGAGCGGAG +
Preference number: 4 (lower is better)
Translates to: MGAIPFSGLEHSIMLATCFFSLA*GFLRAE
Trigger: CTCCGCTCTCAAGAAGCCTCAGGCCAAACTGAAGAA...GCATGTGGCCAGCATTATAGAATGCTCCAGGCCAGAGAATGGGATTGCTCCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR TCA 90 bp GTGATTTCCCTGGGGGCAGTAACCACCCCTCAGGATGTCCTTCTTTCTAATCCCTCCAGCTCCGTCTGGTaGACCTCCAGATATTCATCA +
Preference number: 4 (lower is better)
Translates to: VISLGAVTTPQDVLLSNPSSSVW*TSRYSS
Trigger: TGATGAATATCTGGAGGTTCACCAGACGGAGCTGGA...GGGATTAGAAAGAAGGACATCCTGAGGGGTGGTTACTGCCCCCAGGGAAATCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR TCA 90 bp AGAATGAATGCCTTGGGCATGACAAGAAGCAGCCCTGCTTCCTCTGGAGCTCTGTCCAGCTCCGTCTGGTaGACCTCCAGATATTCATCA +
Preference number: 4 (lower is better)
Translates to: RMNALGMTRSSPASSGALSSSVW*TSRYSS
Trigger: TGATGAATATCTGGAGGTTCACCAGACGGAGCTGGA...CAGAGCTCCAGAGGAAGCAGGGCTGCTTCTTGTCATGCCCAAGGCATTCATTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000645100.1
ENST00000647136.1
CDS-3UTR TCA 90 bp GAACTATTTGGCCAGGGAATCCTACCAGTGAGTGATTTCCCTGGGGGCAGTAACCTACCTACCAGGATGTaGGTTGCTAGCCCTTTGAGC +
Preference number: 4 (lower is better)
Translates to: ELFGQGILPVSDFPGGSNLPTRM*VASPLS
Trigger: GCTCAAAGGGCTAGCAACTCACATCCTGGTAGGTAG...GTTACTGCCCCCAGGGAAATCACTCACTGGTAGGATTCCCTGGCCAAATAGTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR TCA 90 bp GTCTTGAACTCTTGGGCTCCAGCAATCCTGGGCTTCCCAAAGTGTTGGGATTACCTACCTACCAGGATGTaGGTTGCTAGCCCTTTGAGC +
Preference number: 4 (lower is better)
Translates to: VLNSWAPAILGFPKCWDYLPTRM*VASPLS
Trigger: GCTCAAAGGGCTAGCAACTCACATCCTGGTAGGTAG...GTAATCCCAACACTTTGGGAAGCCCAGGATTGCTGGAGCCCAAGAGTTCAAGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000645100.1
ENST00000647136.1
CDS-3UTR TCA 90 bp CTCCACTCCTACTCCATTAGGATTTCTCTGACTTCTAGGTTCCTCCACCTCAAATCGACAGCCACTACCTaGGGTCGGGCTGCAAACAGC +
Preference number: 4 (lower is better)
Translates to: LHSYSIRISLTSRFLHLKSTATT*GRAANS
Trigger: GCTGTTTGCAGCCCGACCTCAGGTAGTGGCTGTCGA...TTTGAGGTGGAGGAACCTAGAAGTCAGAGAAATCCTAATGGAGTAGGAGTGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR TCA 90 bp AAAATGGCACAATATCTGGGACTGGTTGCAGAAGAATCCAGAGGGAAGTCAGCATCGACAGCCACTACCTaGGGTCGGGCTGCAAACAGC +
Preference number: 4 (lower is better)
Translates to: KMAQYLGLVAEESRGKSASTATT*GRAANS
Trigger: GCTGTTTGCAGCCCGACCTCAGGTAGTGGCTGTCGA...TGCTGACTTCCCTCTGGATTCTTCTGCAACCAGTCCCAGATATTGTGCCATTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR TCA 90 bp AAATGGCACAATATCTGGGACTGGTTGCAGAAGAATCCAGAGGGAAGTCAGCAGAGAAGGAGTGGTCTTTaGAGGTGGGCGTTTCCGGGG +
Preference number: 4 (lower is better)
Translates to: KWHNIWDWLQKNPEGSQQRRSGL*RWAFPG
Trigger: CCCCGGAAACGCCCACCTTCAAAGACCACTCCTTCT...CTGCTGACTTCCCTCTGGATTCTTCTGCAACCAGTCCCAGATATTGTGCCATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR TCA 90 bp GTACAACCATGGATAAAATGGCACAATATCTGGGACTGGTTGCAGAAGAATCCAGGAAGGGGAGCCTGTTaGGTGGGAGGTGAGGGCGCA +
Preference number: 4 (lower is better)
Translates to: VQPWIKWHNIWDWLQKNPGRGAC*VGGEGA
Trigger: TGCGCCCTCACCTCCCACTCAACAGGCTCCCCTTCC...TGGATTCTTCTGCAACCAGTCCCAGATATTGTGCCATTTTATCCATGGTTGTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
CDS-3UTR TCA 90 bp AGAAGCAGCCCTGCTTCCTCTGGAGCTCTGCCTCAAAGGGAACAAGTCCCACCAAATTTCTGGATTTGTTaGGTTGGAAGGGGAGCCTGT +
Preference number: 4 (lower is better)
Translates to: RSSPASSGALPQREQVPPNFWIC*VGRGAC
Trigger: ACAGGCTCCCCTTCCAACTCAACAAATCCAGAAATT...TGGTGGGACTTGTTCCCTTTGAGGCAGAGCTCCAGAGGAAGCAGGGCTGCTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR TCA 90 bp GAACTATTTGGCCAGGGAATCCTACCAGTGAGTGATTTCCCTGGGGGCAGTAACGTTCCTGGAAGATGCTaGGCTGGTGTCATCCATACC +
Preference number: 4 (lower is better)
Translates to: ELFGQGILPVSDFPGGSNVPGRC*AGVIHT
Trigger: GGTATGGATGACACCAGCTCAGCATCTTCCAGGAAC...GTTACTGCCCCCAGGGAAATCACTCACTGGTAGGATTCCCTGGCCAAATAGTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR TCA 90 bp CATGAGTTGATCACTGAGGAGGTTGAGGGATGGGCACACTGGGATCCATTAGAGTTCCTCCTTCAGGTGTaGCTTTGGCTCTTGGCCTTC +
Preference number: 4 (lower is better)
Translates to: HELITEEVEGWAHWDPLEFLLQV*LWLLAF
Trigger: GAAGGCCAAGAGCCAAAGTCACACCTGAAGGAGGAA...CTCTAATGGATCCCAGTGTGCCCATCCCTCAACCTCCTCAGTGATCAACTCATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR TCA 90 bp GCATTCTATAATGCTGGCCACATGCAGAAACATTACAAGCAAAACAATGCCAGTCTCAGCCCCAGCACCTaGGGACTGTCGGCGGCAAGC +
Preference number: 4 (lower is better)
Translates to: AFYNAGHMQKHYKQNNASLSPST*GLSAAS
Trigger: GCTTGCCGCCGACAGTCCTCAGGTGCTGGGGCTGAG...ACTGGCATTGTTTTGCTTGTAATGTTTCTGCATGTGGCCAGCATTATAGAATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR TCA 90 bp GGCCATGAGTTGATCACTGAGGAGGTTGAGGGATGGGCACACTGGGATCCATTAAGATTGGCCATGAGTTaGTCACTGAGGAGGTTGAGG +
Preference number: 4 (lower is better)
Translates to: GHELITEEVEGWAHWDPLRLAMS*SLRRLR
Trigger: CCTCAACCTCCTCAGTGATCAACTCATGGCCAATCT...TAATGGATCCCAGTGTGCCCATCCCTCAACCTCCTCAGTGATCAACTCATGGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR TCA 90 bp ATCATGGGAGCAATCCCATTCTCTGGCCTGGAGCATTCTATAATGCTGGCCACACTCATTCACCCTCAGTaGTCTCCGTCCAAGAGGCAG +
Preference number: 4 (lower is better)
Translates to: IMGAIPFSGLEHSIMLATLIHPQ*SPSKRQ
Trigger: CTGCCTCTTGGACGGAGATCACTGAGGGTGAATGAG...TGTGGCCAGCATTATAGAATGCTCCAGGCCAGAGAATGGGATTGCTCCCATGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR TCA 90 bp AGGGCCTTGCAGGGATCTGTCTCTGACACTCAAGATGGCACAAAAGCACATGGGGCAGGGATCTGTCTCTaGCACTCAAGATGGCACAAA +
Preference number: 4 (lower is better)
Translates to: RALQGSVSDTQDGTKAHGAGICL*HSRWHK
Trigger: TTTGTGCCATCTTGAGTGTCAGAGACAGATCCCTGC...CCCATGTGCTTTTGTGCCATCTTGAGTGTCAGAGACAGATCCCTGCAAGGCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR TCA 90 bp ACTTCCCTGACCAGGCCCTGGCATCATGGGAGCAATCCCATTCTCTGGCCTGGATTTTCCTCTGAGGACTaGGGAAAGAATGAATGCCTT +
Preference number: 4 (lower is better)
Translates to: TSLTRPWHHGSNPILWPGFSSED*GKNECL
Trigger: AAGGCATTCATTCTTTCCTCAGTCCTCAGAGGAAAA...TCCAGGCCAGAGAATGGGATTGCTCCCATGATGCCAGGGCCTGGTCAGGGAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000645100.1
ENST00000647136.1
CDS-3UTR GCA 90 bp GATAAAATGGCACAATATCTGGGACTGGTTGCAGAAGAATCCAGAGGGAAGTCACCGCACCTCCGGCTTTaGAGACAGCCTGAGCTGGCT +
Preference number: 4 (lower is better)
Translates to: DKMAQYLGLVAEESRGKSPHLRL*RQPELA
Trigger: AGCCAGCTCAGGCTGTCTGCAAAGCCGGAGGTGCGG...TGACTTCCCTCTGGATTCTTCTGCAACCAGTCCCAGATATTGTGCCATTTTATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644621.1
CDS-3UTR GCA 90 bp ATAAAATGGCACAATATCTGGGACTGGTTGCAGAAGAATCCAGAGGGAAGTCAGTCCGCACCAATGCAATaGCCGGAGCTGCCCGCACCT +
Preference number: 4 (lower is better)
Translates to: IKWHNIWDWLQKNPEGSQSAPMQ*PELPAP
Trigger: AGGTGCGGGCAGCTCCGGGCATTGCATTGGTGCGGA...CTGACTTCCCTCTGGATTCTTCTGCAACCAGTCCCAGATATTGTGCCATTTTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644621.1
CDS-3UTR GCA 90 bp CTCCACTCCTACTCCATTAGGATTTCTCTGACTTCTAGGTTCCTCCACCTCAAATCTCCCGGGCAGCTTTaGTGGCAGGGGATGTTGCGA +
Preference number: 4 (lower is better)
Translates to: LHSYSIRISLTSRFLHLKSPGQL*WQGMLR
Trigger: TCGCAACATCCCCTGCCAGCAAAGCTGCCCGGGAGA...TTTGAGGTGGAGGAACCTAGAAGTCAGAGAAATCCTAATGGAGTAGGAGTGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR GCA 90 bp GCAGCCCTGCTTCCTCTGGAGCTCTGCCTCAAAGGGAACAAGTCCCACCACTTCCATCCCAGCTCTGCTTaGCATTTACTTCTATTTTGC +
Preference number: 4 (lower is better)
Translates to: AALLPLELCLKGNKSHHFHPSSA*HLLLFC
Trigger: GCAAAATAGAAGTAAATGGCAAGCAGAGCTGGGATG...GAAGTGGTGGGACTTGTTCCCTTTGAGGCAGAGCTCCAGAGGAAGCAGGGCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR GCA 90 bp GCAGCCCTGCTTCCTCTGGAGCTCTGCCTCAAAGGGAACAAGTCCCACCACTTCTCTCCATCCCAGCTCTaGTTGCCATTTACTTCTATT +
Preference number: 4 (lower is better)
Translates to: AALLPLELCLKGNKSHHFSPSQL*LPFTSI
Trigger: AATAGAAGTAAATGGCAAGCAGAGCTGGGATGGAGA...GAAGTGGTGGGACTTGTTCCCTTTGAGGCAGAGCTCCAGAGGAAGCAGGGCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR GCA 90 bp CTCCACTCCTACTCCATTAGGATTTCTCTGACTTCTAGGTTCCTCCACCTCAAATCTCCTCTGAAGGGCTaGTGCCTTGTTCCCAGCGCC +
Preference number: 4 (lower is better)
Translates to: LHSYSIRISLTSRFLHLKSPLKG*CLVPSA
Trigger: GGCGCTGGGAACAAGGCAGCAGCCCTTCAGAGGAGA...TTTGAGGTGGAGGAACCTAGAAGTCAGAGAAATCCTAATGGAGTAGGAGTGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR GCA 90 bp AAAATGGCACAATATCTGGGACTGGTTGCAGAAGAATCCAGAGGGAAGTCAGCATCTCCTCTGAAGGGCTaGTGCCTTGTTCCCAGCGCC +
Preference number: 4 (lower is better)
Translates to: KMAQYLGLVAEESRGKSASPLKG*CLVPSA
Trigger: GGCGCTGGGAACAAGGCAGCAGCCCTTCAGAGGAGA...TGCTGACTTCCCTCTGGATTCTTCTGCAACCAGTCCCAGATATTGTGCCATTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR GCA 90 bp TCCAAATATTCAAGAGGATGCTGGGGTGGGTCGAATGGGACAAATTCTGCAAGTTCTCCTCTGAAGGGCTaGTGCCTTGTTCCCAGCGCC +
Preference number: 4 (lower is better)
Translates to: SKYSRGCWGGSNGTNSASSPLKG*CLVPSA
Trigger: GGCGCTGGGAACAAGGCAGCAGCCCTTCAGAGGAGA...ACTTGCAGAATTTGTCCCATTCGACCCACCCCAGCATCCTCTTGAATATTTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR GCA 90 bp AATGGCACAATATCTGGGACTGGTTGCAGAAGAATCCAGAGGGAAGTCAGCAGGTTCTCAAGGAACAGGTaGTCAGCCCCAGCACCTGAG +
Preference number: 4 (lower is better)
Translates to: NGTISGTGCRRIQREVSRFSRNR*SAPAPE
Trigger: CTCAGGTGCTGGGGCTGAGCACCTGTTCCTTGAGAA...CCTGCTGACTTCCCTCTGGATTCTTCTGCAACCAGTCCCAGATATTGTGCCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR GCA 90 bp AATGGCACAATATCTGGGACTGGTTGCAGAAGAATCCAGAGGGAAGTCAGCAGGGGCCATTGGCACCTCTaGAGATGTGAGCCTCTTGAC +
Preference number: 4 (lower is better)
Translates to: NGTISGTGCRRIQREVSRGHWHL*RCEPLD
Trigger: GTCAAGAGGCTCACATCTGCAGAGGTGCCAATGGCC...CCTGCTGACTTCCCTCTGGATTCTTCTGCAACCAGTCCCAGATATTGTGCCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR GCA 90 bp ATGTTTGAACTATTTGGCCAGGGAATCCTACCAGTGAGTGATTTCCCTGGGGGCGGCCATTGGCACCTCTaGAGATGTGAGCCTCTTGAC +
Preference number: 4 (lower is better)
Translates to: MFELFGQGILPVSDFPGGGHWHL*RCEPLD
Trigger: GTCAAGAGGCTCACATCTGCAGAGGTGCCAATGGCC...GCCCCCAGGGAAATCACTCACTGGTAGGATTCCCTGGCCAAATAGTTCAAACAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR GCA 90 bp CAAGAAGCAGCCCTGCTTCCTCTGGAGCTCTGCCTCAAAGGGAACAAGTCCCACCATCTAGAAAGGATCTaGAGCCTTCAGATTCTCCAC +
Preference number: 4 (lower is better)
Translates to: QEAALLPLELCLKGNKSHHLERI*SLQILH
Trigger: GTGGAGAATCTGAAGGCTGCAGATCCTTTCTAGATG...GTGGGACTTGTTCCCTTTGAGGCAGAGCTCCAGAGGAAGCAGGGCTGCTTCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR GCA 90 bp ATGTTTGAACTATTTGGCCAGGGAATCCTACCAGTGAGTGATTTCCCTGGGGGCGTGCAGTACTGGAGGTaGCTGACGATGGTGATGTCC +
Preference number: 4 (lower is better)
Translates to: MFELFGQGILPVSDFPGGVQYWR*LTMVMS
Trigger: GGACATCACCATCGTCAGGCACCTCCAGTACTGCAC...GCCCCCAGGGAAATCACTCACTGGTAGGATTCCCTGGCCAAATAGTTCAAACAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR GCA 90 bp ATGTTTGAACTATTTGGCCAGGGAATCCTACCAGTGAGTGATTTCCCTGGGGGCAAGCTGGCCTCCAGCTaGTTCATCACTCTGTCCGCT +
Preference number: 4 (lower is better)
Translates to: MFELFGQGILPVSDFPGGKLASS*FITLSA
Trigger: AGCGGACAGAGTGATGAAGCAGCTGGAGGCCAGCTT...GCCCCCAGGGAAATCACTCACTGGTAGGATTCCCTGGCCAAATAGTTCAAACAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR GCA 90 bp CTCCACTCCTACTCCATTAGGATTTCTCTGACTTCTAGGTTCCTCCACCTCAAAGCTGGGCCAGGAGGTTaGTGGGAGCAAGGTCACTCA +
Preference number: 4 (lower is better)
Translates to: LHSYSIRISLTSRFLHLKAGPGG*WEQGHS
Trigger: TGAGTGACCTTGCTCCCAGCAACCTCCTGGCCCAGC...TTTGAGGTGGAGGAACCTAGAAGTCAGAGAAATCCTAATGGAGTAGGAGTGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR GCA 90 bp ATGTTTGAACTATTTGGCCAGGGAATCCTACCAGTGAGTGATTTCCCTGGGGGCCAGAGCCAGGCAAGCTaGTTTCTGGAGCTGGAGGTT +
Preference number: 4 (lower is better)
Translates to: MFELFGQGILPVSDFPGGQSQAS*FLELEV
Trigger: AACCTCCAGCTCCAGAAAGCAGCTTGCCTGGCTCTG...GCCCCCAGGGAAATCACTCACTGGTAGGATTCCCTGGCCAAATAGTTCAAACAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR GCA 90 bp GTGATTTCCCTGGGGGCAGTAACCACCCCTCAGGATGTCCTTCTTTCTAATCCCGTCCAATTGTTCATATaGCAGCCGCCCATCTTCTCC +
Preference number: 4 (lower is better)
Translates to: VISLGAVTTPQDVLLSNPVQLFI*QPPIFS
Trigger: GGAGAAGATGGGCGGCTGGCATATGAACAATTGGAC...GGGATTAGAAAGAAGGACATCCTGAGGGGTGGTTACTGCCCCCAGGGAAATCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR GCA 90 bp CAGCCCTGCTTCCTCTGGAGCTCTGCCTCAAAGGGAACAAGTCCCACCACTTCCTTACAAGCAAAACAATaGCAGTTGCTATGGGCACAG +
Preference number: 4 (lower is better)
Translates to: QPCFLWSSASKGTSPTTSLQAKQ*QLLWAQ
Trigger: CTGTGCCCATAGCAACTGGCATTGTTTTGCTTGTAA...GGAAGTGGTGGGACTTGTTCCCTTTGAGGCAGAGCTCCAGAGGAAGCAGGGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR GCA 90 bp ACTTCCCTGACCAGGCCCTGGCATCATGGGAGCAATCCCATTCTCTGGCCTGGAATGAGCCACCGCACCTaGTCACAGCATATAATTTTT +
Preference number: 4 (lower is better)
Translates to: TSLTRPWHHGSNPILWPGMSHRT*SQHIIF
Trigger: AAAAATTATATGCTGTGAGCAGGTGCGGTGGCTCAT...TCCAGGCCAGAGAATGGGATTGCTCCCATGATGCCAGGGCCTGGTCAGGGAAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000645100.1
ENST00000647136.1
CDS-3UTR GCA 90 bp ATAAAATGGCACAATATCTGGGACTGGTTGCAGAAGAATCCAGAGGGAAGTCAGCCTGTGGGCTTCAGATaGCCGAACCCACCAGGGTGG +
Preference number: 4 (lower is better)
Translates to: IKWHNIWDWLQKNPEGSQPVGFR*PNPPGW
Trigger: CCACCCTGGTGGGTTCGGGCATCTGAAGCCCACAGG...CTGACTTCCCTCTGGATTCTTCTGCAACCAGTCCCAGATATTGTGCCATTTTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643623.1
CDS-3UTR GCA 90 bp CATGAGTTGATCACTGAGGAGGTTGAGGGATGGGCACACTGGGATCCATTAGAGTCTGCTTGCAAAAAGTaGGCGTGCCCCTTTCGCTCA +
Preference number: 4 (lower is better)
Translates to: HELITEEVEGWAHWDPLESACKK*ACPFRS
Trigger: TGAGCGAAAGGGGCACGCGCACTTTTTGCAAGCAGA...CTCTAATGGATCCCAGTGTGCCCATCCCTCAACCTCCTCAGTGATCAACTCATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000643623.1
CDS-3UTR GCA 90 bp GCATTCTATAATGCTGGCCACATGCAGAAACATTACAAGCAAAACAATGCCAGTTCCGCTCGCAGCAGCTaGGGCGCGCGGGGTGAAGTT +
Preference number: 4 (lower is better)
Translates to: AFYNAGHMQKHYKQNNASSARSS*GARGEV
Trigger: AACTTCACCCCGCGCGCCGCAGCTGCTGCGAGCGGA...ACTGGCATTGTTTTGCTTGTAATGTTTCTGCATGTGGCCAGCATTATAGAATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644411.1
CDS-3UTR CCA 90 bp CTCCACTCCTACTCCATTAGGATTTCTCTGACTTCTAGGTTCCTCCACCTCAAAGCAGACAGCCTGAGCTaGCTCACTTGGGTGAAGGGG +
Preference number: 4 (lower is better)
Translates to: LHSYSIRISLTSRFLHLKADSLS*LTWVKG
Trigger: CCCCTTCACCCAAGTGAGCCAGCTCAGGCTGTCTGC...TTTGAGGTGGAGGAACCTAGAAGTCAGAGAAATCCTAATGGAGTAGGAGTGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259698.9
CDS-3UTR CCA 90 bp AAAATGGCACAATATCTGGGACTGGTTGCAGAAGAATCCAGAGGGAAGTCAGCACTGGATCGCCTTTCCTaGAGGCCGCTGAAACCCGCA +
Preference number: 4 (lower is better)
Translates to: KMAQYLGLVAEESRGKSALDRLS*RPLKPA
Trigger: TGCGGGTTTCAGCGGCCTCCAGGAAAGGCGATCCAG...TGCTGACTTCCCTCTGGATTCTTCTGCAACCAGTCCCAGATATTGTGCCATTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR CCA 90 bp AATGGCACAATATCTGGGACTGGTTGCAGAAGAATCCAGAGGGAAGTCAGCAGGTTGCTGGCACCATCCTaGAGGCGTCGCTGGATACAA +
Preference number: 4 (lower is better)
Translates to: NGTISGTGCRRIQREVSRLLAPS*RRRWIQ
Trigger: TTGTATCCAGCGACGCCTCCAGGATGGTGCCAGCAA...CCTGCTGACTTCCCTCTGGATTCTTCTGCAACCAGTCCCAGATATTGTGCCATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR CCA 90 bp GTCTTGAACTCTTGGGCTCCAGCAATCCTGGGCTTCCCAAAGTGTTGGGATTACCTTGCTTCATTTTGCTaGCACCATCCTGGAGGCGTC +
Preference number: 4 (lower is better)
Translates to: VLNSWAPAILGFPKCWDYLASFC*HHPGGV
Trigger: GACGCCTCCAGGATGGTGCCAGCAAAATGAAGCAAG...GTAATCCCAACACTTTGGGAAGCCCAGGATTGCTGGAGCCCAAGAGTTCAAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000645100.1
ENST00000647136.1
CDS-3UTR CCA 90 bp AAGTGGCAATGTCTTCGGTGTTTTACAAAAGGCGCTAGCTATCTAAGGCATCTGCCCGGGCAGCTTTGCTaGCAGGGGATGTTGCGAAGG +
Preference number: 4 (lower is better)
Translates to: KWQCLRCFTKGASYLRHLPGQLC*QGMLRR
Trigger: CCTTCGCAACATCCCCTGCCAGCAAAGCTGCCCGGG...CAGATGCCTTAGATAGCTAGCGCCTTTTGTAAAACACCGAAGACATTGCCACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000510784.8
ENST00000540914.5
CDS-3UTR CCA 90 bp ATAAAATGGCACAATATCTGGGACTGGTTGCAGAAGAATCCAGAGGGAAGTCAGCCCGGGCAGCTTTGCTaGCAGGGGATGTTGCGAAGG +
Preference number: 4 (lower is better)
Translates to: IKWHNIWDWLQKNPEGSQPGQLC*QGMLRR
Trigger: CCTTCGCAACATCCCCTGCCAGCAAAGCTGCCCGGG...CTGACTTCCCTCTGGATTCTTCTGCAACCAGTCCCAGATATTGTGCCATTTTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR CCA 90 bp GGCCATGAGTTGATCACTGAGGAGGTTGAGGGATGGGCACACTGGGATCCATTATACCCTGGCTGTACATaGACATTCTCCTCTGAAGGG +
Preference number: 4 (lower is better)
Translates to: GHELITEEVEGWAHWDPLYPGCT*TFSSEG
Trigger: CCCTTCAGAGGAGAATGTCCATGTACAGCCAGGGTA...TAATGGATCCCAGTGTGCCCATCCCTCAACCTCCTCAGTGATCAACTCATGGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR CCA 90 bp GAACTATTTGGCCAGGGAATCCTACCAGTGAGTGATTTCCCTGGGGGCAGTAACGTTTCCGGGGTACCCTaGCTGTACATGGACATTCTC +
Preference number: 4 (lower is better)
Translates to: ELFGQGILPVSDFPGGSNVSGVP*LYMDIL
Trigger: GAGAATGTCCATGTACAGCCAGGGTACCCCGGAAAC...GTTACTGCCCCCAGGGAAATCACTCACTGGTAGGATTCCCTGGCCAAATAGTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CCA 90 bp ATCATGGGAGCAATCCCATTCTCTGGCCTGGAGCATTCTATAATGCTGGCCACAGAAGCTGAGCGACAGTaGCATTTTCTCCTCGGCTGC +
Preference number: 4 (lower is better)
Translates to: IMGAIPFSGLEHSIMLATEAERQ*HFLLGC
Trigger: GCAGCCGAGGAGAAAATGCCACTGTCGCTCAGCTTC...TGTGGCCAGCATTATAGAATGCTCCAGGCCAGAGAATGGGATTGCTCCCATGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR CCA 90 bp GCAATCCCATTCTCTGGCCTGGAGCATTCTATAATGCTGGCCACATGCAGAAACTCCATACCCTCATTCTaGGAGGCCAAGCTGCTGAGG +
Preference number: 4 (lower is better)
Translates to: AIPFSGLEHSIMLATCRNSIPSF*EAKLLR
Trigger: CCTCAGCAGCTTGGCCTCCCAGAATGAGGGTATGGA...GTTTCTGCATGTGGCCAGCATTATAGAATGCTCCAGGCCAGAGAATGGGATTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR CCA 90 bp AATGGCACAATATCTGGGACTGGTTGCAGAAGAATCCAGAGGGAAGTCAGCAGGCTCCCAGGGAGTTCCTaGAAGATGCTGAGCTGGTGT +
Preference number: 4 (lower is better)
Translates to: NGTISGTGCRRIQREVSRLPGSS*KMLSWC
Trigger: ACACCAGCTCAGCATCTTCCAGGAACTCCCTGGGAG...CCTGCTGACTTCCCTCTGGATTCTTCTGCAACCAGTCCCAGATATTGTGCCATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR CCA 90 bp GGGACTGGTTGCAGAAGAATCCAGAGGGAAGTCAGCAGGTTGAAGAATAGGAAACCGAGGCAGGTTTTCTaGGCTCCTCTGGGTCTTCCT +
Preference number: 4 (lower is better)
Translates to: GTGCRRIQREVSRLKNRKPRQVF*APLGLP
Trigger: AGGAAGACCCAGAGGAGCCCAGAAAACCTGCCTCGG...TTTCCTATTCTTCAACCTGCTGACTTCCCTCTGGATTCTTCTGCAACCAGTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR CCA 90 bp AATGGCACAATATCTGGGACTGGTTGCAGAAGAATCCAGAGGGAAGTCAGCAGGCCTGTCTGTGGCCATTaGCACCTCTGCAGATGTGAG +
Preference number: 4 (lower is better)
Translates to: NGTISGTGCRRIQREVSRPVCGH*HLCRCE
Trigger: CTCACATCTGCAGAGGTGCCAATGGCCACAGACAGG...CCTGCTGACTTCCCTCTGGATTCTTCTGCAACCAGTCCCAGATATTGTGCCATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR CCA 90 bp ATGTTTGAACTATTTGGCCAGGGAATCCTACCAGTGAGTGATTTCCCTGGGGGCCCTGTCTGTGGCCATTaGCACCTCTGCAGATGTGAG +
Preference number: 4 (lower is better)
Translates to: MFELFGQGILPVSDFPGGPVCGH*HLCRCE
Trigger: CTCACATCTGCAGAGGTGCCAATGGCCACAGACAGG...GCCCCCAGGGAAATCACTCACTGGTAGGATTCCCTGGCCAAATAGTTCAAACAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CCA 90 bp GGGACTGGTTGCAGAAGAATCCAGAGGGAAGTCAGCAGGTTGAAGAATAGGAAAAGAGCAGCCTGTCTGTaGCCATTGGCACCTCTGCAG +
Preference number: 4 (lower is better)
Translates to: GTGCRRIQREVSRLKNRKRAACL*PLAPLQ
Trigger: CTGCAGAGGTGCCAATGGCCACAGACAGGCTGCTCT...TTTCCTATTCTTCAACCTGCTGACTTCCCTCTGGATTCTTCTGCAACCAGTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR CCA 90 bp GAACTATTTGGCCAGGGAATCCTACCAGTGAGTGATTTCCCTGGGGGCAGTAACCAGTTCTGGCAAAGCTaGCCTCCAGCTGCTTCATCA +
Preference number: 4 (lower is better)
Translates to: ELFGQGILPVSDFPGGSNQFWQS*PPAASS
Trigger: TGATGAAGCAGCTGGAGGCCAGCTTTGCCAGAACTG...GTTACTGCCCCCAGGGAAATCACTCACTGGTAGGATTCCCTGGCCAAATAGTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CCA 90 bp ATGTTTGAACTATTTGGCCAGGGAATCCTACCAGTGAGTGATTTCCCTGGGGGCGCCCGGTCCAGAATTTaGGACACCAGGGTTCGAAAC +
Preference number: 4 (lower is better)
Translates to: MFELFGQGILPVSDFPGGARSRI*DTRVRN
Trigger: GTTTCGAACCCTGGTGTCCCAAATTCTGGACCGGGC...GCCCCCAGGGAAATCACTCACTGGTAGGATTCCCTGGCCAAATAGTTCAAACAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CCA 90 bp ATGTTTGAACTATTTGGCCAGGGAATCCTACCAGTGAGTGATTTCCCTGGGGGCCCATGGAAACTTGCCTaGCCAGCTGGCTCAGGTAAC +
Preference number: 4 (lower is better)
Translates to: MFELFGQGILPVSDFPGGPWKLA*PAGSGN
Trigger: GTTACCTGAGCCAGCTGGCCAGGCAAGTTTCCATGG...GCCCCCAGGGAAATCACTCACTGGTAGGATTCCCTGGCCAAATAGTTCAAACAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CCA 90 bp GAACTATTTGGCCAGGGAATCCTACCAGTGAGTGATTTCCCTGGGGGCAGTAACGCAGAGTCTGAACCATaGAAACTTGCCTGGCCAGCT +
Preference number: 4 (lower is better)
Translates to: ELFGQGILPVSDFPGGSNAESEP*KLAWPA
Trigger: AGCTGGCCAGGCAAGTTTCCATGGTTCAGACTCTGC...GTTACTGCCCCCAGGGAAATCACTCACTGGTAGGATTCCCTGGCCAAATAGTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CCA 90 bp CTCCACTCCTACTCCATTAGGATTTCTCTGACTTCTAGGTTCCTCCACCTCAAAGGGCCAGGAGGTTGCTaGGAGCAAGGTCACTCATGG +
Preference number: 4 (lower is better)
Translates to: LHSYSIRISLTSRFLHLKGPGGC*EQGHSW
Trigger: CCATGAGTGACCTTGCTCCCAGCAACCTCCTGGCCC...TTTGAGGTGGAGGAACCTAGAAGTCAGAGAAATCCTAATGGAGTAGGAGTGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CCA 90 bp GAACTATTTGGCCAGGGAATCCTACCAGTGAGTGATTTCCCTGGGGGCAGTAACCAGTCTGGAGTGCAGTaGGGCAATTATGGCTCACTG +
Preference number: 4 (lower is better)
Translates to: ELFGQGILPVSDFPGGSNQSGVQ*GNYGSL
Trigger: CAGTGAGCCATAATTGCCCCACTGCACTCCAGACTG...GTTACTGCCCCCAGGGAAATCACTCACTGGTAGGATTCCCTGGCCAAATAGTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CCA 90 bp AAGGGAACAAGTCCCACCACTTCCCTGACCAGGCCCTGGCATCATGGGAGCAATTGGCACAAAAGCACATaGGAAAACGTCTTTCGGTCT +
Preference number: 4 (lower is better)
Translates to: KGTSPTTSLTRPWHHGSNWHKST*ENVFRS
Trigger: AGACCGAAAGACGTTTTCCCATGTGCTTTTGTGCCA...ATTGCTCCCATGATGCCAGGGCCTGGTCAGGGAAGTGGTGGGACTTGTTCCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR CCA 90 bp ATCATGGGAGCAATCCCATTCTCTGGCCTGGAGCATTCTATAATGCTGGCCACACAGGCCCTGGCATCATaGGAGCAATCCCATTCTCTG +
Preference number: 4 (lower is better)
Translates to: IMGAIPFSGLEHSIMLATQALAS*EQSHSL
Trigger: CAGAGAATGGGATTGCTCCCATGATGCCAGGGCCTG...TGTGGCCAGCATTATAGAATGCTCCAGGCCAGAGAATGGGATTGCTCCCATGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR CCA 90 bp GCAATCCCATTCTCTGGCCTGGAGCATTCTATAATGCTGGCCACATGCAGAAACCAGGCCCTGGCATCATaGGAGCAATCCCATTCTCTG +
Preference number: 4 (lower is better)
Translates to: AIPFSGLEHSIMLATCRNQALAS*EQSHSL
Trigger: CAGAGAATGGGATTGCTCCCATGATGCCAGGGCCTG...GTTTCTGCATGTGGCCAGCATTATAGAATGCTCCAGGCCAGAGAATGGGATTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR CCA 90 bp GGGACTGGTTGCAGAAGAATCCAGAGGGAAGTCAGCAGGTTGAAGAATAGGAAAGGGCTCCAGCAATCCTaGGCTTCCCAAAGTGTTGGG +
Preference number: 4 (lower is better)
Translates to: GTGCRRIQREVSRLKNRKGLQQS*ASQSVG
Trigger: CCCAACACTTTGGGAAGCCCAGGATTGCTGGAGCCC...TTTCCTATTCTTCAACCTGCTGACTTCCCTCTGGATTCTTCTGCAACCAGTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510784.8
ENST00000540914.5
CDS-3UTR CCA 90 bp GATAAAATGGCACAATATCTGGGACTGGTTGCAGAAGAATCCAGAGGGAAGTCACCGAACCCACCAGGGTaGTGGAAGCTGAGGACGCTC +
Preference number: 4 (lower is better)
Translates to: DKMAQYLGLVAEESRGKSPNPPG*WKLRTL
Trigger: GAGCGTCCTCAGCTTCCACCACCCTGGTGGGTTCGG...TGACTTCCCTCTGGATTCTTCTGCAACCAGTCCCAGATATTGTGCCATTTTATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643623.1
CDS-3UTR CCA 90 bp ATAAAATGGCACAATATCTGGGACTGGTTGCAGAAGAATCCAGAGGGAAGTCAGCTGGTCGGTAGTCCTTaGCCCGTTCCTCCACTCCCC +
Preference number: 4 (lower is better)
Translates to: IKWHNIWDWLQKNPEGSQLVGSP*PVPPLP
Trigger: GGGGAGTGGAGGAACGGGCCAAGGACTACCGACCAG...CTGACTTCCCTCTGGATTCTTCTGCAACCAGTCCCAGATATTGTGCCATTTTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643623.1
CDS-3UTR TCA 90 bp GCAATCCCATTCTCTGGCCTGGAGCATTCTATAATGCTGGCCACATGCAGAAACTTCTTCAGTTTGGCCTaGGGCTTCTTGAGAGCGGAG +
Preference number: 4 (lower is better)
Translates to: AIPFSGLEHSIMLATCRNFFSLA*GFLRAE
Trigger: CTCCGCTCTCAAGAAGCCTCAGGCCAAACTGAAGAA...GTTTCTGCATGTGGCCAGCATTATAGAATGCTCCAGGCCAGAGAATGGGATTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR TCA 90 bp GAACTATTTGGCCAGGGAATCCTACCAGTGAGTGATTTCCCTGGGGGCAGTAACTCCAGCTCCGTCTGGTaGACCTCCAGATATTCATCA +
Preference number: 4 (lower is better)
Translates to: ELFGQGILPVSDFPGGSNSSSVW*TSRYSS
Trigger: TGATGAATATCTGGAGGTTCACCAGACGGAGCTGGA...GTTACTGCCCCCAGGGAAATCACTCACTGGTAGGATTCCCTGGCCAAATAGTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR TCA 90 bp CCTGGCATCATGGGAGCAATCCCATTCTCTGGCCTGGAGCATTCTATAATGCTGTCCAGCTCCGTCTGGTaGACCTCCAGATATTCATCA +
Preference number: 4 (lower is better)
Translates to: PGIMGAIPFSGLEHSIMLSSSVW*TSRYSS
Trigger: TGATGAATATCTGGAGGTTCACCAGACGGAGCTGGA...CAGCATTATAGAATGCTCCAGGCCAGAGAATGGGATTGCTCCCATGATGCCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR TCA 90 bp GCAGCCCTGCTTCCTCTGGAGCTCTGCCTCAAAGGGAACAAGTCCCACCACTTCTTCATATCTTTTAACTaGGCTGTCAACTTGTCCAGC +
Preference number: 4 (lower is better)
Translates to: AALLPLELCLKGNKSHHFFISFN*AVNLSS
Trigger: GCTGGACAAGTTGACAGCTCAGTTAAAAGATATGAA...GAAGTGGTGGGACTTGTTCCCTTTGAGGCAGAGCTCCAGAGGAAGCAGGGCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR TCA 90 bp CAAGAAGCAGCCCTGCTTCCTCTGGAGCTCTGCCTCAAAGGGAACAAGTCCCACTCTACCTTACTTATATaGAACTCCAGGCGTCTCATG +
Preference number: 4 (lower is better)
Translates to: QEAALLPLELCLKGNKSHSTLLI*NSRRLM
Trigger: CATGAGACGCCTGGAGTTTCATATAAGTAAGGTAGA...GTGGGACTTGTTCCCTTTGAGGCAGAGCTCCAGAGGAAGCAGGGCTGCTTCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR TCA 90 bp AGAATGAATGCCTTGGGCATGACAAGAAGCAGCCCTGCTTCCTCTGGAGCTCTGCCAGACCTTTCATCTTaGTGGAGAATTCTCCCAGCA +
Preference number: 4 (lower is better)
Translates to: RMNALGMTRSSPASSGALPDLSS*WRILPA
Trigger: TGCTGGGAGAATTCTCCATCAAGATGAAAGGTCTGG...CAGAGCTCCAGAGGAAGCAGGGCTGCTTCTTGTCATGCCCAAGGCATTCATTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000645100.1
ENST00000647136.1
CDS-3UTR TCA 90 bp ATAAAATGGCACAATATCTGGGACTGGTTGCAGAAGAATCCAGAGGGAAGTCAGTCGACAGCCACTACCTaGGGTCGGGCTGCAAACAGC +
Preference number: 4 (lower is better)
Translates to: IKWHNIWDWLQKNPEGSQSTATT*GRAANS
Trigger: GCTGTTTGCAGCCCGACCTCAGGTAGTGGCTGTCGA...CTGACTTCCCTCTGGATTCTTCTGCAACCAGTCCCAGATATTGTGCCATTTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR TCA 90 bp TGCAGAAGAATCCAGAGGGAAGTCAGCAGGTTGAAGAATAGGAAACAAGATTGGTCGACAGCCACTACCTaGGGTCGGGCTGCAAACAGC +
Preference number: 4 (lower is better)
Translates to: CRRIQREVSRLKNRKQDWSTATT*GRAANS
Trigger: GCTGTTTGCAGCCCGACCTCAGGTAGTGGCTGTCGA...CCAATCTTGTTTCCTATTCTTCAACCTGCTGACTTCCCTCTGGATTCTTCTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR TCA 90 bp ATAAAATGGCACAATATCTGGGACTGGTTGCAGAAGAATCCAGAGGGAAGTCAGCTTGTTCCCAGCGCCTaGGGATGCGGTCATGTCCTC +
Preference number: 4 (lower is better)
Translates to: IKWHNIWDWLQKNPEGSQLVPSA*GCGHVL
Trigger: GAGGACATGACCGCATCCTCAGGCGCTGGGAACAAG...CTGACTTCCCTCTGGATTCTTCTGCAACCAGTCCCAGATATTGTGCCATTTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR TCA 90 bp AATGGCACAATATCTGGGACTGGTTGCAGAAGAATCCAGAGGGAAGTCAGCAGGATGGACATTCTCCTCTaGAGGGCTGCTGCCTTGTTC +
Preference number: 4 (lower is better)
Translates to: NGTISGTGCRRIQREVSRMDILL*RAAALF
Trigger: GAACAAGGCAGCAGCCCTTCAGAGGAGAATGTCCAT...CCTGCTGACTTCCCTCTGGATTCTTCTGCAACCAGTCCCAGATATTGTGCCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR TCA 90 bp TCCAAATATTCAAGAGGATGCTGGGGTGGGTCGAATGGGACAAATTCTGCAAGTAGAAGGAGTGGTCTTTaGAGGTGGGCGTTTCCGGGG +
Preference number: 4 (lower is better)
Translates to: SKYSRGCWGGSNGTNSASRRSGL*RWAFPG
Trigger: CCCCGGAAACGCCCACCTTCAAAGACCACTCCTTCT...ACTTGCAGAATTTGTCCCATTCGACCCACCCCAGCATCCTCTTGAATATTTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR TCA 90 bp ATTACACTCACATATATTGTTTTGATACCTTGGCATACCCCACCTTGTACACTCGGGAGGGCAGGTCACTaGAGGAGCGGCTGCGGTGCA +
Preference number: 4 (lower is better)
Translates to: ITLTYIVLIPWHTPPCTLGRAGH*RSGCGA
Trigger: TGCACCGCAGCCGCTCCTTCAGTGACCTGCCCTCCC...GAGTGTACAAGGTGGGGTATGCCAAGGTATCAAAACAATATATGTGAGTGTAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259698.9
ENST00000613507.4
CDS-3UTR TCA 90 bp GCATTCTATAATGCTGGCCACATGCAGAAACATTACAAGCAAAACAATGCCAGTCTGTTGAGTGGGAGGTaGGGGCGCAGTCCCCGTTGG +
Preference number: 4 (lower is better)
Translates to: AFYNAGHMQKHYKQNNASLLSGR*GRSPRW
Trigger: CCAACGGGGACTGCGCCCTCACCTCCCACTCAACAG...ACTGGCATTGTTTTGCTTGTAATGTTTCTGCATGTGGCCAGCATTATAGAATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR TCA 90 bp GATAAGTTCACAGTTGAAAGAACCATTTGCCAGAAGCCTGGCAAACAATTTGCAGGAAGGGGAGCCTGTTaGGTGGGAGGTGAGGGCGCA +
Preference number: 4 (lower is better)
Translates to: DKFTVERTICQKPGKQFAGRGAC*VGGEGA
Trigger: TGCGCCCTCACCTCCCACTCAACAGGCTCCCCTTCC...TGCAAATTGTTTGCCAGGCTTCTGGCAAATGGTTCTTTCAACTGTGAACTTATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR TCA 90 bp GAGCATTCTATAATGCTGGCCACATGCAGAAACATTACAAGCAAAACAATGCCAGGAAGGGGAGCCTGTTaGGTGGGAGGTGAGGGCGCA +
Preference number: 4 (lower is better)
Translates to: EHSIMLATCRNITSKTMPGRGAC*VGGEGA
Trigger: TGCGCCCTCACCTCCCACTCAACAGGCTCCCCTTCC...TGGCATTGTTTTGCTTGTAATGTTTCTGCATGTGGCCAGCATTATAGAATGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR TCA 90 bp ATCATGGGAGCAATCCCATTCTCTGGCCTGGAGCATTCTATAATGCTGGCCACAGTTCCTGGAAGATGCTaGGCTGGTGTCATCCATACC +
Preference number: 4 (lower is better)
Translates to: IMGAIPFSGLEHSIMLATVPGRC*AGVIHT
Trigger: GGTATGGATGACACCAGCTCAGCATCTTCCAGGAAC...TGTGGCCAGCATTATAGAATGCTCCAGGCCAGAGAATGGGATTGCTCCCATGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR TCA 90 bp ATCATGGGAGCAATCCCATTCTCTGGCCTGGAGCATTCTATAATGCTGGCCACATTCCTCCTTCAGGTGTaGCTTTGGCTCTTGGCCTTC +
Preference number: 4 (lower is better)
Translates to: IMGAIPFSGLEHSIMLATFLLQV*LWLLAF
Trigger: GAAGGCCAAGAGCCAAAGTCACACCTGAAGGAGGAA...TGTGGCCAGCATTATAGAATGCTCCAGGCCAGAGAATGGGATTGCTCCCATGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR TCA 90 bp CATTTTTATTTCAGTTGTCGTGTCTCTCAGGCTCTAAACAATTTCCAGCCCAAACTCAGCCCCAGCACCTaGGGACTGTCGGCGGCAAGC +
Preference number: 4 (lower is better)
Translates to: HFYFSCRVSQALNNFQPKLSPST*GLSAAS
Trigger: GCTTGCCGCCGACAGTCCTCAGGTGCTGGGGCTGAG...TTTGGGCTGGAAATTGTTTAGAGCCTGAGAGACACGACAACTGAAATAAAAATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR TCA 90 bp GTGATTTCCCTGGGGGCAGTAACCACCCCTCAGGATGTCCTTCTTTCTAATCCCCTATGTTCTCATCACTaGCAGCTGCGAGTTTCTCCA +
Preference number: 4 (lower is better)
Translates to: VISLGAVTTPQDVLLSNPLCSHH*QLRVSP
Trigger: TGGAGAAACTCGCAGCTGTCAGTGATGAGAACATAG...GGGATTAGAAAGAAGGACATCCTGAGGGGTGGTTACTGCCCCCAGGGAAATCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR TCA 90 bp GTGATTTCCCTGGGGGCAGTAACCACCCCTCAGGATGTCCTTCTTTCTAATCCCGCAACTTCAGTTCCATaGCGACCTCCGACTTTAACA +
Preference number: 4 (lower is better)
Translates to: VISLGAVTTPQDVLLSNPATSVP*RPPTLT
Trigger: TGTTAAAGTCGGAGGTCGTCATGGAACTGAAGTTGC...GGGATTAGAAAGAAGGACATCCTGAGGGGTGGTTACTGCCCCCAGGGAAATCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR TCA 90 bp GAACTATTTGGCCAGGGAATCCTACCAGTGAGTGATTTCCCTGGGGGCAGTAACGGGACTACTCAACCCTaGGAACACGACCGAGAAAAA +
Preference number: 4 (lower is better)
Translates to: ELFGQGILPVSDFPGGSNGTTQP*EHDREK
Trigger: TTTTTCTCGGTCGTGTTCTCAGGGTTGAGTAGTCCC...GTTACTGCCCCCAGGGAAATCACTCACTGGTAGGATTCCCTGGCCAAATAGTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR TCA 90 bp CATGAGTTGATCACTGAGGAGGTTGAGGGATGGGCACACTGGGATCCATTAGAGAGATTGGCCATGAGTTaGTCACTGAGGAGGTTGAGG +
Preference number: 4 (lower is better)
Translates to: HELITEEVEGWAHWDPLERLAMS*SLRRLR
Trigger: CCTCAACCTCCTCAGTGATCAACTCATGGCCAATCT...CTCTAATGGATCCCAGTGTGCCCATCCCTCAACCTCCTCAGTGATCAACTCATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR TCA 90 bp TGCTTCCTCTGGAGCTCTGCCTCAAAGGGAACAAGTCCCACCACTTCCCTGACCGGGAAGTCAGCAGGTTaGAGAATAGGAAACAAGATT +
Preference number: 4 (lower is better)
Translates to: CFLWSSASKGTSPTTSLTGKSAG*RIGNKI
Trigger: AATCTTGTTTCCTATTCTTCAACCTGCTGACTTCCC...GGTCAGGGAAGTGGTGGGACTTGTTCCCTTTGAGGCAGAGCTCCAGAGGAAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510784.8
ENST00000540914.5
CDS-3UTR TCA 90 bp AACAAGTCCCACCACTTCCCTGACCAGGCCCTGGCATCATGGGAGCAATCCCATGCACCATTTAGTTTCTaGTCGTCAAGGTGTTTAGCA +
Preference number: 4 (lower is better)
Translates to: NKSHHFPDQALASWEQSHAPFSF*SSRCLA
Trigger: TGCTAAACACCTTGACGATCAGAAACTAAATGGTGC...ATGGGATTGCTCCCATGATGCCAGGGCCTGGTCAGGGAAGTGGTGGGACTTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR TCA 90 bp AACAAGTCCCACCACTTCCCTGACCAGGCCCTGGCATCATGGGAGCAATCCCATTTTTCCTCTGAGGACTaGGGAAAGAATGAATGCCTT +
Preference number: 4 (lower is better)
Translates to: NKSHHFPDQALASWEQSHFSSED*GKNECL
Trigger: AAGGCATTCATTCTTTCCTCAGTCCTCAGAGGAAAA...ATGGGATTGCTCCCATGATGCCAGGGCCTGGTCAGGGAAGTGGTGGGACTTGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000645100.1
ENST00000647136.1
CDS-3UTR GCA 90 bp TGCAGAAGAATCCAGAGGGAAGTCAGCAGGTTGAAGAATAGGAAACAAGATTGGTCTCCCGGGCAGCTTTaGTGGCAGGGGATGTTGCGA +
Preference number: 4 (lower is better)
Translates to: CRRIQREVSRLKNRKQDWSPGQL*WQGMLR
Trigger: TCGCAACATCCCCTGCCAGCAAAGCTGCCCGGGAGA...CCAATCTTGTTTCCTATTCTTCAACCTGCTGACTTCCCTCTGGATTCTTCTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR GCA 90 bp ATAAAATGGCACAATATCTGGGACTGGTTGCAGAAGAATCCAGAGGGAAGTCAGTCTCCCGGGCAGCTTTaGTGGCAGGGGATGTTGCGA +
Preference number: 4 (lower is better)
Translates to: IKWHNIWDWLQKNPEGSQSPGQL*WQGMLR
Trigger: TCGCAACATCCCCTGCCAGCAAAGCTGCCCGGGAGA...CTGACTTCCCTCTGGATTCTTCTGCAACCAGTCCCAGATATTGTGCCATTTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR GCA 90 bp GATAAAATGGCACAATATCTGGGACTGGTTGCAGAAGAATCCAGAGGGAAGTCATCTCCCGGGCAGCTTTaGTGGCAGGGGATGTTGCGA +
Preference number: 4 (lower is better)
Translates to: DKMAQYLGLVAEESRGKSSPGQL*WQGMLR
Trigger: TCGCAACATCCCCTGCCAGCAAAGCTGCCCGGGAGA...TGACTTCCCTCTGGATTCTTCTGCAACCAGTCCCAGATATTGTGCCATTTTATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR GCA 90 bp AGGGCCTTGCAGGGATCTGTCTCTGACACTCAAGATGGCACAAAAGCACATGGGTTCAGTTTCCACCGCTaGCGGCCATACTTCATGAAA +
Preference number: 4 (lower is better)
Translates to: RALQGSVSDTQDGTKAHGFSFHR*RPYFMK
Trigger: TTTCATGAAGTATGGCCGGCAGCGGTGGAAACTGAA...CCCATGTGCTTTTGTGCCATCTTGAGTGTCAGAGACAGATCCCTGCAAGGCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR GCA 90 bp AAGGGAACAAGTCCCACCACTTCCCTGACCAGGCCCTGGCATCATGGGAGCAATTCTCCATCCCAGCTCTaGTTGCCATTTACTTCTATT +
Preference number: 4 (lower is better)
Translates to: KGTSPTTSLTRPWHHGSNSPSQL*LPFTSI
Trigger: AATAGAAGTAAATGGCAAGCAGAGCTGGGATGGAGA...ATTGCTCCCATGATGCCAGGGCCTGGTCAGGGAAGTGGTGGGACTTGTTCCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR GCA 90 bp ATAAAATGGCACAATATCTGGGACTGGTTGCAGAAGAATCCAGAGGGAAGTCAGTCTCCTCTGAAGGGCTaGTGCCTTGTTCCCAGCGCC +
Preference number: 4 (lower is better)
Translates to: IKWHNIWDWLQKNPEGSQSPLKG*CLVPSA
Trigger: GGCGCTGGGAACAAGGCAGCAGCCCTTCAGAGGAGA...CTGACTTCCCTCTGGATTCTTCTGCAACCAGTCCCAGATATTGTGCCATTTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR GCA 90 bp GAACTATTTGGCCAGGGAATCCTACCAGTGAGTGATTTCCCTGGGGGCAGTAACTTGTCTGGGGAAGGATaGAGCCACCTAAAGAAGGAG +
Preference number: 4 (lower is better)
Translates to: ELFGQGILPVSDFPGGSNLSGEG*SHLKKE
Trigger: CTCCTTCTTTAGGTGGCTGCATCCTTCCCCAGACAA...GTTACTGCCCCCAGGGAAATCACTCACTGGTAGGATTCCCTGGCCAAATAGTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000259698.9
ENST00000613507.4
CDS-3UTR GCA 90 bp AAATGGCACAATATCTGGGACTGGTTGCAGAAGAATCCAGAGGGAAGTCAGCAGTTCTCAAGGAACAGGTaGTCAGCCCCAGCACCTGAG +
Preference number: 4 (lower is better)
Translates to: KWHNIWDWLQKNPEGSQQFSRNR*SAPAPE
Trigger: CTCAGGTGCTGGGGCTGAGCACCTGTTCCTTGAGAA...CTGCTGACTTCCCTCTGGATTCTTCTGCAACCAGTCCCAGATATTGTGCCATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR GCA 90 bp CATGAGTTGATCACTGAGGAGGTTGAGGGATGGGCACACTGGGATCCATTAGAGGCCTCCTCAGACTCTTaGAGAAGTGCTTCTGCAACA +
Preference number: 4 (lower is better)
Translates to: HELITEEVEGWAHWDPLEASSDS*RSASAT
Trigger: TGTTGCAGAAGCACTTCTGCAAGAGTCTGAGGAGGC...CTCTAATGGATCCCAGTGTGCCCATCCCTCAACCTCCTCAGTGATCAACTCATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR GCA 90 bp GAACTATTTGGCCAGGGAATCCTACCAGTGAGTGATTTCCCTGGGGGCAGTAACGCCTCCTCAGACTCTTaGAGAAGTGCTTCTGCAACA +
Preference number: 4 (lower is better)
Translates to: ELFGQGILPVSDFPGGSNASSDS*RSASAT
Trigger: TGTTGCAGAAGCACTTCTGCAAGAGTCTGAGGAGGC...GTTACTGCCCCCAGGGAAATCACTCACTGGTAGGATTCCCTGGCCAAATAGTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR GCA 90 bp CCTGGCATCATGGGAGCAATCCCATTCTCTGGCCTGGAGCATTCTATAATGCTGGCCTCCTCAGACTCTTaGAGAAGTGCTTCTGCAACA +
Preference number: 4 (lower is better)
Translates to: PGIMGAIPFSGLEHSIMLASSDS*RSASAT
Trigger: TGTTGCAGAAGCACTTCTGCAAGAGTCTGAGGAGGC...CAGCATTATAGAATGCTCCAGGCCAGAGAATGGGATTGCTCCCATGATGCCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR GCA 90 bp GTGATTTCCCTGGGGGCAGTAACCACCCCTCAGGATGTCCTTCTTTCTAATCCCAGCCTCTTGACCAGCTaGTTTGTGATGTTTCCTTCC +
Preference number: 4 (lower is better)
Translates to: VISLGAVTTPQDVLLSNPSLLTS*FVMFPS
Trigger: GGAAGGAAACATCACAAAGCAGCTGGTCAAGAGGCT...GGGATTAGAAAGAAGGACATCCTGAGGGGTGGTTACTGCCCCCAGGGAAATCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR GCA 90 bp ATTCAAGAGGATGCTGGGGTGGGTCGAATGGGACAAATTCTGCAAGTTAGAAGCGGCCATTGGCACCTCTaGAGATGTGAGCCTCTTGAC +
Preference number: 4 (lower is better)
Translates to: IQEDAGVGRMGQILQVRSGHWHL*RCEPLD
Trigger: GTCAAGAGGCTCACATCTGCAGAGGTGCCAATGGCC...GCTTCTAACTTGCAGAATTTGTCCCATTCGACCCACCCCAGCATCCTCTTGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR GCA 90 bp GAACTATTTGGCCAGGGAATCCTACCAGTGAGTGATTTCCCTGGGGGCAGTAACTTAAACTGGAAGACCTaGTGCGGCTTACTGCTGGCT +
Preference number: 4 (lower is better)
Translates to: ELFGQGILPVSDFPGGSNLNWKT*CGLLLA
Trigger: AGCCAGCAGTAAGCCGCAGCAGGTCTTCCAGTTTAA...GTTACTGCCCCCAGGGAAATCACTCACTGGTAGGATTCCCTGGCCAAATAGTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR GCA 90 bp GTGATTTCCCTGGGGGCAGTAACCACCCCTCAGGATGTCCTTCTTTCTAATCCCATTTTTGGAGGCTGCTaGCAAGTAAAGCGTCACAGC +
Preference number: 4 (lower is better)
Translates to: VISLGAVTTPQDVLLSNPIFGGC*QVKRHS
Trigger: GCTGTGACGCTTTACTTGGCAGCAGCCTCCAAAAAT...GGGATTAGAAAGAAGGACATCCTGAGGGGTGGTTACTGCCCCCAGGGAAATCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR GCA 90 bp GTGATTTCCCTGGGGGCAGTAACCACCCCTCAGGATGTCCTTCTTTCTAATCCCCTGATTTTTGGAGGCTaGTGCCAAGTAAAGCGTCAC +
Preference number: 4 (lower is better)
Translates to: VISLGAVTTPQDVLLSNPLIFGG*CQVKRH
Trigger: GTGACGCTTTACTTGGCAGCAGCCTCCAAAAATCAG...GGGATTAGAAAGAAGGACATCCTGAGGGGTGGTTACTGCCCCCAGGGAAATCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR GCA 90 bp ATGTTTGAACTATTTGGCCAGGGAATCCTACCAGTGAGTGATTTCCCTGGGGGCTCACCCAGTCTGGAGTaGAGTGGGGCAATTATGGCT +
Preference number: 4 (lower is better)
Translates to: MFELFGQGILPVSDFPGGSPSLE*SGAIMA
Trigger: AGCCATAATTGCCCCACTGCACTCCAGACTGGGTGA...GCCCCCAGGGAAATCACTCACTGGTAGGATTCCCTGGCCAAATAGTTCAAACAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR GCA 90 bp GTGATTTCCCTGGGGGCAGTAACCACCCCTCAGGATGTCCTTCTTTCTAATCCCTCACATGGGCTGGAGTaGAGTAGTGTAATCTCAGCT +
Preference number: 4 (lower is better)
Translates to: VISLGAVTTPQDVLLSNPSHGLE*SSVISA
Trigger: AGCTGAGATTACACTACTGCACTCCAGCCCATGTGA...GGGATTAGAAAGAAGGACATCCTGAGGGGTGGTTACTGCCCCCAGGGAAATCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR GCA 90 bp GGCATCATGGGAGCAATCCCATTCTCTGGCCTGGAGCATTCTATAATGCTGGCCGAGCGGCCTAAAACCTaGTCATGGCAAAGGAACAAA +
Preference number: 4 (lower is better)
Translates to: GIMGAIPFSGLEHSIMLAERPKT*SWQRNK
Trigger: TTTGTTCCTTTGCCATGAGCAGGTTTTAGGCCGCTC...GGCCAGCATTATAGAATGCTCCAGGCCAGAGAATGGGATTGCTCCCATGATGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510784.8
CDS-3UTR GCA 90 bp TGCTTCCTCTGGAGCTCTGCCTCAAAGGGAACAAGTCCCACCACTTCCCTGACCATGAGCCACCGCACCTaGTCACAGCATATAATTTTT +
Preference number: 4 (lower is better)
Translates to: CFLWSSASKGTSPTTSLTMSHRT*SQHIIF
Trigger: AAAAATTATATGCTGTGAGCAGGTGCGGTGGCTCAT...GGTCAGGGAAGTGGTGGGACTTGTTCCCTTTGAGGCAGAGCTCCAGAGGAAGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000645100.1
ENST00000647136.1
CDS-3UTR GCA 90 bp GGCATCATGGGAGCAATCCCATTCTCTGGCCTGGAGCATTCTATAATGCTGGCCACTGCTATATCCCTCTaGCTAGTGCTCACCCCAAAA +
Preference number: 4 (lower is better)
Translates to: GIMGAIPFSGLEHSIMLATAISL*LVLTPK
Trigger: TTTTGGGGTGAGCACTAGGCAGAGGGATATAGCAGT...GGCCAGCATTATAGAATGCTCCAGGCCAGAGAATGGGATTGCTCCCATGATGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510784.8
ENST00000540914.5
CDS-3UTR CCA 90 bp TGGATAAAATGGCACAATATCTGGGACTGGTTGCAGAAGAATCCAGAGGGAAGTGCAGACAGCCTGAGCTaGCTCACTTGGGTGAAGGGG +
Preference number: 4 (lower is better)
Translates to: WIKWHNIWDWLQKNPEGSADSLS*LTWVKG
Trigger: CCCCTTCACCCAAGTGAGCCAGCTCAGGCTGTCTGC...ACTTCCCTCTGGATTCTTCTGCAACCAGTCCCAGATATTGTGCCATTTTATCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644621.1
CDS-3UTR CCA 90 bp GGCCATGAGTTGATCACTGAGGAGGTTGAGGGATGGGCACACTGGGATCCATTAACACTCAGGGTTCTCTaGCATATAAAAGCCTCCGCA +
Preference number: 4 (lower is better)
Translates to: GHELITEEVEGWAHWDPLTLRVL*HIKASA
Trigger: TGCGGAGGCTTTTATATGCCAGAGAACCCTGAGTGT...TAATGGATCCCAGTGTGCCCATCCCTCAACCTCCTCAGTGATCAACTCATGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644621.1
CDS-3UTR CCA 90 bp AAATGGCACAATATCTGGGACTGGTTGCAGAAGAATCCAGAGGGAAGTCAGCAGTTGCTGGCACCATCCTaGAGGCGTCGCTGGATACAA +
Preference number: 4 (lower is better)
Translates to: KWHNIWDWLQKNPEGSQQLLAPS*RRRWIQ
Trigger: TTGTATCCAGCGACGCCTCCAGGATGGTGCCAGCAA...CTGCTGACTTCCCTCTGGATTCTTCTGCAACCAGTCCCAGATATTGTGCCATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR CCA 90 bp GGGGTGGGTCGAATGGGACAAATTCTGCAAGTTAGAAGCACTAAATGTCCTCCATTGCTGGCACCATCCTaGAGGCGTCGCTGGATACAA +
Preference number: 4 (lower is better)
Translates to: GVGRMGQILQVRSTKCPPLLAPS*RRRWIQ
Trigger: TTGTATCCAGCGACGCCTCCAGGATGGTGCCAGCAA...TGGAGGACATTTAGTGCTTCTAACTTGCAGAATTTGTCCCATTCGACCCACCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR CCA 90 bp ATGTTTGAACTATTTGGCCAGGGAATCCTACCAGTGAGTGATTTCCCTGGGGGCCTTGCTTCATTTTGCTaGCACCATCCTGGAGGCGTC +
Preference number: 4 (lower is better)
Translates to: MFELFGQGILPVSDFPGGLASFC*HHPGGV
Trigger: GACGCCTCCAGGATGGTGCCAGCAAAATGAAGCAAG...GCCCCCAGGGAAATCACTCACTGGTAGGATTCCCTGGCCAAATAGTTCAAACAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CCA 90 bp CCTGGCATCATGGGAGCAATCCCATTCTCTGGCCTGGAGCATTCTATAATGCTGCTGCAAACAGCTCTTTaGTCTCACAGGTCACGCTAC +
Preference number: 4 (lower is better)
Translates to: PGIMGAIPFSGLEHSIMLLQTAL*SHRSRY
Trigger: GTAGCGTGACCTGTGAGACCAAAGAGCTGTTTGCAG...CAGCATTATAGAATGCTCCAGGCCAGAGAATGGGATTGCTCCCATGATGCCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR CCA 90 bp GATATGTACACGATAAGTTCACAGTTGAAAGAACCATTTGCCAGAAGCCTGGCACCGCCTGGGCTTGTCTaGGGAAGGATGCAGCCACCT +
Preference number: 4 (lower is better)
Translates to: DMYTISSQLKEPFARSLAPPGLV*GRMQPP
Trigger: AGGTGGCTGCATCCTTCCCCAGACAAGCCCAGGCGG...TGCCAGGCTTCTGGCAAATGGTTCTTTCAACTGTGAACTTATCGTGTACATATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259698.9
ENST00000613507.4
CDS-3UTR CCA 90 bp CTCCACTCCTACTCCATTAGGATTTCTCTGACTTCTAGGTTCCTCCACCTCAAAAGACAGACAGCCGCCTaGGCTTGTCTGGGGAAGGAT +
Preference number: 4 (lower is better)
Translates to: LHSYSIRISLTSRFLHLKRQTAA*ACLGKD
Trigger: ATCCTTCCCCAGACAAGCCCAGGCGGCTGTCTGTCT...TTTGAGGTGGAGGAACCTAGAAGTCAGAGAAATCCTAATGGAGTAGGAGTGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259698.9
ENST00000613507.4
CDS-3UTR CCA 90 bp AGGGCCTTGCAGGGATCTGTCTCTGACACTCAAGATGGCACAAAAGCACATGGGCTGGATTTGTTGAGTTaGAAGGGGAGCCTGTTGAGT +
Preference number: 4 (lower is better)
Translates to: RALQGSVSDTQDGTKAHGLDLLS*KGSLLS
Trigger: ACTCAACAGGCTCCCCTTCCAACTCAACAAATCCAG...CCCATGTGCTTTTGTGCCATCTTGAGTGTCAGAGACAGATCCCTGCAAGGCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR CCA 90 bp GGGGTGGGTCGAATGGGACAAATTCTGCAAGTTAGAAGCACTAAATGTCCTCCATCCATACCCTCATTCTaGGAGGCCAAGCTGCTGAGG +
Preference number: 4 (lower is better)
Translates to: GVGRMGQILQVRSTKCPPSIPSF*EAKLLR
Trigger: CCTCAGCAGCTTGGCCTCCCAGAATGAGGGTATGGA...TGGAGGACATTTAGTGCTTCTAACTTGCAGAATTTGTCCCATTCGACCCACCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR CCA 90 bp AAATGGCACAATATCTGGGACTGGTTGCAGAAGAATCCAGAGGGAAGTCAGCAGTCCATACCCTCATTCTaGGAGGCCAAGCTGCTGAGG +
Preference number: 4 (lower is better)
Translates to: KWHNIWDWLQKNPEGSQQSIPSF*EAKLLR
Trigger: CCTCAGCAGCTTGGCCTCCCAGAATGAGGGTATGGA...CTGCTGACTTCCCTCTGGATTCTTCTGCAACCAGTCCCAGATATTGTGCCATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR CCA 90 bp AAATGGCACAATATCTGGGACTGGTTGCAGAAGAATCCAGAGGGAAGTCAGCAGCTCCCAGGGAGTTCCTaGAAGATGCTGAGCTGGTGT +
Preference number: 4 (lower is better)
Translates to: KWHNIWDWLQKNPEGSQQLPGSS*KMLSWC
Trigger: ACACCAGCTCAGCATCTTCCAGGAACTCCCTGGGAG...CTGCTGACTTCCCTCTGGATTCTTCTGCAACCAGTCCCAGATATTGTGCCATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR CCA 90 bp ATGTTTGAACTATTTGGCCAGGGAATCCTACCAGTGAGTGATTTCCCTGGGGGCTTTTCTGGGCTCCTCTaGGTCTTCCTCCTTCAGGTG +
Preference number: 4 (lower is better)
Translates to: MFELFGQGILPVSDFPGGFSGLL*VFLLQV
Trigger: CACCTGAAGGAGGAAGACCCAGAGGAGCCCAGAAAA...GCCCCCAGGGAAATCACTCACTGGTAGGATTCCCTGGCCAAATAGTTCAAACAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CCA 90 bp AAAATGGCACAATATCTGGGACTGGTTGCAGAAGAATCCAGAGGGAAGTCAGCACCGAGGCAGGTTTTCTaGGCTCCTCTGGGTCTTCCT +
Preference number: 4 (lower is better)
Translates to: KMAQYLGLVAEESRGKSAPRQVF*APLGLP
Trigger: AGGAAGACCCAGAGGAGCCCAGAAAACCTGCCTCGG...TGCTGACTTCCCTCTGGATTCTTCTGCAACCAGTCCCAGATATTGTGCCATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR CCA 90 bp TGGATAAAATGGCACAATATCTGGGACTGGTTGCAGAAGAATCCAGAGGGAAGTGCGGCAAGCCTCAGATaGGGCCGAGGCAGGTTTTCT +
Preference number: 4 (lower is better)
Translates to: WIKWHNIWDWLQKNPEGSAASLR*GRGRFS
Trigger: AGAAAACCTGCCTCGGCCCCATCTGAGGCTTGCCGC...ACTTCCCTCTGGATTCTTCTGCAACCAGTCCCAGATATTGTGCCATTTTATCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR CCA 90 bp AAGTGGCAATGTCTTCGGTGTTTTACAAAAGGCGCTAGCTATCTAAGGCATCTGGCGGCAAGCCTCAGATaGGGCCGAGGCAGGTTTTCT +
Preference number: 4 (lower is better)
Translates to: KWQCLRCFTKGASYLRHLAASLR*GRGRFS
Trigger: AGAAAACCTGCCTCGGCCCCATCTGAGGCTTGCCGC...CAGATGCCTTAGATAGCTAGCGCCTTTTGTAAAACACCGAAGACATTGCCACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000510784.8
ENST00000540914.5
CDS-3UTR CCA 90 bp ATATTCAAGAGGATGCTGGGGTGGGTCGAATGGGACAAATTCTGCAAGTTAGAAGCGGCAAGCCTCAGATaGGGCCGAGGCAGGTTTTCT +
Preference number: 4 (lower is better)
Translates to: IFKRMLGWVEWDKFCKLEAASLR*GRGRFS
Trigger: AGAAAACCTGCCTCGGCCCCATCTGAGGCTTGCCGC...TTCTAACTTGCAGAATTTGTCCCATTCGACCCACCCCAGCATCCTCTTGAATAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR CCA 90 bp TGCAGAAGAATCCAGAGGGAAGTCAGCAGGTTGAAGAATAGGAAACAAGATTGGGCGGCAAGCCTCAGATaGGGCCGAGGCAGGTTTTCT +
Preference number: 4 (lower is better)
Translates to: CRRIQREVSRLKNRKQDWAASLR*GRGRFS
Trigger: AGAAAACCTGCCTCGGCCCCATCTGAGGCTTGCCGC...CCAATCTTGTTTCCTATTCTTCAACCTGCTGACTTCCCTCTGGATTCTTCTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR CCA 90 bp ACAATATCTGGGACTGGTTGCAGAAGAATCCAGAGGGAAGTCAGCAGGTTGAAGCCTGTCTGTGGCCATTaGCACCTCTGCAGATGTGAG +
Preference number: 4 (lower is better)
Translates to: TISGTGCRRIQREVSRLKPVCGH*HLCRCE
Trigger: CTCACATCTGCAGAGGTGCCAATGGCCACAGACAGG...CTTCAACCTGCTGACTTCCCTCTGGATTCTTCTGCAACCAGTCCCAGATATTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR CCA 90 bp ATGTTTGAACTATTTGGCCAGGGAATCCTACCAGTGAGTGATTTCCCTGGGGGCGACTTCCTGCCACACTaGTCCCAACTCCTGTGTCTT +
Preference number: 4 (lower is better)
Translates to: MFELFGQGILPVSDFPGGDFLPH*SQLLCL
Trigger: AAGACACAGGAGTTGGGACCAGTGTGGCAGGAAGTC...GCCCCCAGGGAAATCACTCACTGGTAGGATTCCCTGGCCAAATAGTTCAAACAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CCA 90 bp CTCCACTCCTACTCCATTAGGATTTCTCTGACTTCTAGGTTCCTCCACCTCAAAGGCTCTCGTTGCCTGTaGTCAGTGGGAGAGGACTTC +
Preference number: 4 (lower is better)
Translates to: LHSYSIRISLTSRFLHLKGSRCL*SVGEDF
Trigger: GAAGTCCTCTCCCACTGACCACAGGCAACGAGAGCC...TTTGAGGTGGAGGAACCTAGAAGTCAGAGAAATCCTAATGGAGTAGGAGTGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CCA 90 bp GAACTATTTGGCCAGGGAATCCTACCAGTGAGTGATTTCCCTGGGGGCAGTAACCAGGGTTCGAAACACTaGGTCTGCAAGTCCTGGATA +
Preference number: 4 (lower is better)
Translates to: ELFGQGILPVSDFPGGSNQGSKH*VCKSWI
Trigger: TATCCAGGACTTGCAGACCCAGTGTTTCGAACCCTG...GTTACTGCCCCCAGGGAAATCACTCACTGGTAGGATTCCCTGGCCAAATAGTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CCA 90 bp ATGTTTGAACTATTTGGCCAGGGAATCCTACCAGTGAGTGATTTCCCTGGGGGCGCAGAGTCTGAACCATaGAAACTTGCCTGGCCAGCT +
Preference number: 4 (lower is better)
Translates to: MFELFGQGILPVSDFPGGAESEP*KLAWPA
Trigger: AGCTGGCCAGGCAAGTTTCCATGGTTCAGACTCTGC...GCCCCCAGGGAAATCACTCACTGGTAGGATTCCCTGGCCAAATAGTTCAAACAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CCA 90 bp CTCCACTCCTACTCCATTAGGATTTCTCTGACTTCTAGGTTCCTCCACCTCAAACTGAGTACTTCCTGCTaGGCCAGGAGGTTGCTGGGA +
Preference number: 4 (lower is better)
Translates to: LHSYSIRISLTSRFLHLKLSTSC*ARRLLG
Trigger: TCCCAGCAACCTCCTGGCCCAGCAGGAAGTACTCAG...TTTGAGGTGGAGGAACCTAGAAGTCAGAGAAATCCTAATGGAGTAGGAGTGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CCA 90 bp GTGATTTCCCTGGGGGCAGTAACCACCCCTCAGGATGTCCTTCTTTCTAATCCCCTTCGTTGTCCTCTCTaGTTAATAGCAGAGCCAGAG +
Preference number: 4 (lower is better)
Translates to: VISLGAVTTPQDVLLSNPLRCPL*LIAEPE
Trigger: CTCTGGCTCTGCTATTAACCAGAGAGGACAACGAAG...GGGATTAGAAAGAAGGACATCCTGAGGGGTGGTTACTGCCCCCAGGGAAATCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CCA 90 bp CAAGAAGCAGCCCTGCTTCCTCTGGAGCTCTGCCTCAAAGGGAACAAGTCCCACTTTGAAAAGAAGGAGTaGTCTTTGAAGGTGGGCGTT +
Preference number: 4 (lower is better)
Translates to: QEAALLPLELCLKGNKSHFEKKE*SLKVGV
Trigger: AACGCCCACCTTCAAAGACCACTCCTTCTTTTCAAA...GTGGGACTTGTTCCCTTTGAGGCAGAGCTCCAGAGGAAGCAGGGCTGCTTCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000645100.1
ENST00000647136.1
CDS-3UTR CCA 90 bp AGGGCCTTGCAGGGATCTGTCTCTGACACTCAAGATGGCACAAAAGCACATGGGCTGGGGTGGGTCGAATaGGACAAATTCTGCAAGTTA +
Preference number: 4 (lower is better)
Translates to: RALQGSVSDTQDGTKAHGLGWVE*DKFCKL
Trigger: TAACTTGCAGAATTTGTCCCATTCGACCCACCCCAG...CCCATGTGCTTTTGTGCCATCTTGAGTGTCAGAGACAGATCCCTGCAAGGCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR CCA 90 bp AGGGCCTTGCAGGGATCTGTCTCTGACACTCAAGATGGCACAAAAGCACATGGGCAATGCCAGTTGCTATaGGCACAGAGTTGGAGAGAA +
Preference number: 4 (lower is better)
Translates to: RALQGSVSDTQDGTKAHGQCQLL*AQSWRE
Trigger: TTCTCTCCAACTCTGTGCCCATAGCAACTGGCATTG...CCCATGTGCTTTTGTGCCATCTTGAGTGTCAGAGACAGATCCCTGCAAGGCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR CCA 90 bp TGCTTCCTCTGGAGCTCTGCCTCAAAGGGAACAAGTCCCACCACTTCCCTGACCAGCAATCCCATTCTCTaGCCTGGAGCATTCTATAAT +
Preference number: 4 (lower is better)
Translates to: CFLWSSASKGTSPTTSLTSNPIL*PGAFYN
Trigger: ATTATAGAATGCTCCAGGCCAGAGAATGGGATTGCT...GGTCAGGGAAGTGGTGGGACTTGTTCCCTTTGAGGCAGAGCTCCAGAGGAAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR TCA 90 bp ATGTTTGAACTATTTGGCCAGGGAATCCTACCAGTGAGTGATTTCCCTGGGGGCTGGCCTGAGGCTTCTTaGGAGCGGAGGAATTTTCAA +
Preference number: 4 (lower is better)
Translates to: MFELFGQGILPVSDFPGGWPEAS*ERRNFQ
Trigger: TTGAAAATTCCTCCGCTCTCAAGAAGCCTCAGGCCA...GCCCCCAGGGAAATCACTCACTGGTAGGATTCCCTGGCCAAATAGTTCAAACAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR TCA 90 bp ACAATATCTGGGACTGGTTGCAGAAGAATCCAGAGGGAAGTCAGCAGGTTGAAGTTCTTCAGTTTGGCCTaGGGCTTCTTGAGAGCGGAG +
Preference number: 4 (lower is better)
Translates to: TISGTGCRRIQREVSRLKFFSLA*GFLRAE
Trigger: CTCCGCTCTCAAGAAGCCTCAGGCCAAACTGAAGAA...CTTCAACCTGCTGACTTCCCTCTGGATTCTTCTGCAACCAGTCCCAGATATTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR TCA 90 bp ATGTTTGAACTATTTGGCCAGGGAATCCTACCAGTGAGTGATTTCCCTGGGGGCTCCAGCTCCGTCTGGTaGACCTCCAGATATTCATCA +
Preference number: 4 (lower is better)
Translates to: MFELFGQGILPVSDFPGGSSSVW*TSRYSS
Trigger: TGATGAATATCTGGAGGTTCACCAGACGGAGCTGGA...GCCCCCAGGGAAATCACTCACTGGTAGGATTCCCTGGCCAAATAGTTCAAACAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR TCA 90 bp ATCATGGGAGCAATCCCATTCTCTGGCCTGGAGCATTCTATAATGCTGGCCACATCCAGCTCCGTCTGGTaGACCTCCAGATATTCATCA +
Preference number: 4 (lower is better)
Translates to: IMGAIPFSGLEHSIMLATSSSVW*TSRYSS
Trigger: TGATGAATATCTGGAGGTTCACCAGACGGAGCTGGA...TGTGGCCAGCATTATAGAATGCTCCAGGCCAGAGAATGGGATTGCTCCCATGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR TCA 90 bp CATGAGTTGATCACTGAGGAGGTTGAGGGATGGGCACACTGGGATCCATTAGAGCCAGACCTTTCATCTTaGTGGAGAATTCTCCCAGCA +
Preference number: 4 (lower is better)
Translates to: HELITEEVEGWAHWDPLEPDLSS*WRILPA
Trigger: TGCTGGGAGAATTCTCCATCAAGATGAAAGGTCTGG...CTCTAATGGATCCCAGTGTGCCCATCCCTCAACCTCCTCAGTGATCAACTCATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR TCA 90 bp TGCTTCCTCTGGAGCTCTGCCTCAAAGGGAACAAGTCCCACCACTTCCCTGACCGCCGGCCATACTTCATaGAAATTTCATATTGATCTC +
Preference number: 4 (lower is better)
Translates to: CFLWSSASKGTSPTTSLTAGHTS*KFHIDL
Trigger: GAGATCAATATGAAATTTTCATGAAGTATGGCCGGC...GGTCAGGGAAGTGGTGGGACTTGTTCCCTTTGAGGCAGAGCTCCAGAGGAAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR TCA 90 bp AAGGGAACAAGTCCCACCACTTCCCTGACCAGGCCCTGGCATCATGGGAGCAATGCCGGCCATACTTCATaGAAATTTCATATTGATCTC +
Preference number: 4 (lower is better)
Translates to: KGTSPTTSLTRPWHHGSNAGHTS*KFHIDL
Trigger: GAGATCAATATGAAATTTTCATGAAGTATGGCCGGC...ATTGCTCCCATGATGCCAGGGCCTGGTCAGGGAAGTGGTGGGACTTGTTCCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR TCA 90 bp ACAATATCTGGGACTGGTTGCAGAAGAATCCAGAGGGAAGTCAGCAGGTTGAAGCTACCTACCAGGATGTaGGTTGCTAGCCCTTTGAGC +
Preference number: 4 (lower is better)
Translates to: TISGTGCRRIQREVSRLKLPTRM*VASPLS
Trigger: GCTCAAAGGGCTAGCAACTCACATCCTGGTAGGTAG...CTTCAACCTGCTGACTTCCCTCTGGATTCTTCTGCAACCAGTCCCAGATATTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR TCA 90 bp GATATGTACACGATAAGTTCACAGTTGAAAGAACCATTTGCCAGAAGCCTGGCATCGACAGCCACTACCTaGGGTCGGGCTGCAAACAGC +
Preference number: 4 (lower is better)
Translates to: DMYTISSQLKEPFARSLASTATT*GRAANS
Trigger: GCTGTTTGCAGCCCGACCTCAGGTAGTGGCTGTCGA...TGCCAGGCTTCTGGCAAATGGTTCTTTCAACTGTGAACTTATCGTGTACATATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR TCA 90 bp GGGACTGGTTGCAGAAGAATCCAGAGGGAAGTCAGCAGGTTGAAGAATAGGAAAATGGACATTCTCCTCTaGAGGGCTGCTGCCTTGTTC +
Preference number: 4 (lower is better)
Translates to: GTGCRRIQREVSRLKNRKMDILL*RAAALF
Trigger: GAACAAGGCAGCAGCCCTTCAGAGGAGAATGTCCAT...TTTCCTATTCTTCAACCTGCTGACTTCCCTCTGGATTCTTCTGCAACCAGTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR TCA 90 bp GGGGTGGGTCGAATGGGACAAATTCTGCAAGTTAGAAGCACTAAATGTCCTCCAATGGACATTCTCCTCTaGAGGGCTGCTGCCTTGTTC +
Preference number: 4 (lower is better)
Translates to: GVGRMGQILQVRSTKCPPMDILL*RAAALF
Trigger: GAACAAGGCAGCAGCCCTTCAGAGGAGAATGTCCAT...TGGAGGACATTTAGTGCTTCTAACTTGCAGAATTTGTCCCATTCGACCCACCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR TCA 90 bp CATTTTTATTTCAGTTGTCGTGTCTCTCAGGCTCTAAACAATTTCCAGCCCAAAGGAAGGGGAGCCTGTTaGGTGGGAGGTGAGGGCGCA +
Preference number: 4 (lower is better)
Translates to: HFYFSCRVSQALNNFQPKGRGAC*VGGEGA
Trigger: TGCGCCCTCACCTCCCACTCAACAGGCTCCCCTTCC...TTTGGGCTGGAAATTGTTTAGAGCCTGAGAGACACGACAACTGAAATAAAAATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR TCA 90 bp GGCATCATGGGAGCAATCCCATTCTCTGGCCTGGAGCATTCTATAATGCTGGCCAATTTCTGGATTTGTTaGGTTGGAAGGGGAGCCTGT +
Preference number: 4 (lower is better)
Translates to: GIMGAIPFSGLEHSIMLANFWIC*VGRGAC
Trigger: ACAGGCTCCCCTTCCAACTCAACAAATCCAGAAATT...GGCCAGCATTATAGAATGCTCCAGGCCAGAGAATGGGATTGCTCCCATGATGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR TCA 90 bp GGCCATGAGTTGATCACTGAGGAGGTTGAGGGATGGGCACACTGGGATCCATTAAATTTCTGGATTTGTTaGGTTGGAAGGGGAGCCTGT +
Preference number: 4 (lower is better)
Translates to: GHELITEEVEGWAHWDPLNFWIC*VGRGAC
Trigger: ACAGGCTCCCCTTCCAACTCAACAAATCCAGAAATT...TAATGGATCCCAGTGTGCCCATCCCTCAACCTCCTCAGTGATCAACTCATGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR TCA 90 bp ACAATATCTGGGACTGGTTGCAGAAGAATCCAGAGGGAAGTCAGCAGGTTGAAGGTTCCTGGAAGATGCTaGGCTGGTGTCATCCATACC +
Preference number: 4 (lower is better)
Translates to: TISGTGCRRIQREVSRLKVPGRC*AGVIHT
Trigger: GGTATGGATGACACCAGCTCAGCATCTTCCAGGAAC...CTTCAACCTGCTGACTTCCCTCTGGATTCTTCTGCAACCAGTCCCAGATATTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR TCA 90 bp AGAAGCAGCCCTGCTTCCTCTGGAGCTCTGCCTCAAAGGGAACAAGTCCCACCATCTTGGTTCAGATCCTaGAACTCTTTATACTGCTCT +
Preference number: 4 (lower is better)
Translates to: RSSPASSGALPQREQVPPSWFRS*NSLYCS
Trigger: AGAGCAGTATAAAGAGTTTCAGGATCTGAACCAAGA...TGGTGGGACTTGTTCCCTTTGAGGCAGAGCTCCAGAGGAAGCAGGGCTGCTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR TCA 90 bp GAACTATTTGGCCAGGGAATCCTACCAGTGAGTGATTTCCCTGGGGGCAGTAACCTATGTTCTCATCACTaGCAGCTGCGAGTTTCTCCA +
Preference number: 4 (lower is better)
Translates to: ELFGQGILPVSDFPGGSNLCSHH*QLRVSP
Trigger: TGGAGAAACTCGCAGCTGTCAGTGATGAGAACATAG...GTTACTGCCCCCAGGGAAATCACTCACTGGTAGGATTCCCTGGCCAAATAGTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR TCA 90 bp GAACTATTTGGCCAGGGAATCCTACCAGTGAGTGATTTCCCTGGGGGCAGTAACGCAACTTCAGTTCCATaGCGACCTCCGACTTTAACA +
Preference number: 4 (lower is better)
Translates to: ELFGQGILPVSDFPGGSNATSVP*RPPTLT
Trigger: TGTTAAAGTCGGAGGTCGTCATGGAACTGAAGTTGC...GTTACTGCCCCCAGGGAAATCACTCACTGGTAGGATTCCCTGGCCAAATAGTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR TCA 90 bp GTGATTTCCCTGGGGGCAGTAACCACCCCTCAGGATGTCCTTCTTTCTAATCCCATGGGACCTGATGTTTaGACTATTTGGCCAGGGAAT +
Preference number: 4 (lower is better)
Translates to: VISLGAVTTPQDVLLSNPMGPDV*TIWPGN
Trigger: ATTCCCTGGCCAAATAGTTCAAACATCAGGTCCCAT...GGGATTAGAAAGAAGGACATCCTGAGGGGTGGTTACTGCCCCCAGGGAAATCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR TCA 90 bp ATGGGAGCAATCCCATTCTCTGGCCTGGAGCATTCTATAATGCTGGCCACATGCCTCCATCCAGTTAGGTaGCACTCCTTGCTGATTTCT +
Preference number: 4 (lower is better)
Translates to: MGAIPFSGLEHSIMLATCLHPVR*HSLLIS
Trigger: AGAAATCAGCAAGGAGTGTCACCTAACTGGATGGAG...GCATGTGGCCAGCATTATAGAATGCTCCAGGCCAGAGAATGGGATTGCTCCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR TCA 90 bp TGCAGAAGAATCCAGAGGGAAGTCAGCAGGTTGAAGAATAGGAAACAAGATTGGCAGGGTGGTGGAAGCTaGGGACGCTCCAGTTTCAAC +
Preference number: 4 (lower is better)
Translates to: CRRIQREVSRLKNRKQDWQGGGS*GRSSFN
Trigger: GTTGAAACTGGAGCGTCCTCAGCTTCCACCACCCTG...CCAATCTTGTTTCCTATTCTTCAACCTGCTGACTTCCCTCTGGATTCTTCTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643623.1
CDS-3UTR GCA 90 bp ATTACACTCACATATATTGTTTTGATACCTTGGCATACCCCACCTTGTACACTCTGCAATGCCCGGAGCTaGCCGCACCTCCGGCTTTGC +
Preference number: 4 (lower is better)
Translates to: ITLTYIVLIPWHTPPCTLCNARS*PHLRLC
Trigger: GCAAAGCCGGAGGTGCGGGCAGCTCCGGGCATTGCA...GAGTGTACAAGGTGGGGTATGCCAAGGTATCAAAACAATATATGTGAGTGTAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259698.9
CDS-3UTR GCA 90 bp GAACTATTTGGCCAGGGAATCCTACCAGTGAGTGATTTCCCTGGGGGCAGTAACGATGTTGCGAAGGCTTaGTTCATTTTGCTGGCACCA +
Preference number: 4 (lower is better)
Translates to: ELFGQGILPVSDFPGGSNDVAKA*FILLAP
Trigger: TGGTGCCAGCAAAATGAAGCAAGCCTTCGCAACATC...GTTACTGCCCCCAGGGAAATCACTCACTGGTAGGATTCCCTGGCCAAATAGTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR GCA 90 bp CCTGGCATCATGGGAGCAATCCCATTCTCTGGCCTGGAGCATTCTATAATGCTGGATGTTGCGAAGGCTTaGTTCATTTTGCTGGCACCA +
Preference number: 4 (lower is better)
Translates to: PGIMGAIPFSGLEHSIMLDVAKA*FILLAP
Trigger: TGGTGCCAGCAAAATGAAGCAAGCCTTCGCAACATC...CAGCATTATAGAATGCTCCAGGCCAGAGAATGGGATTGCTCCCATGATGCCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR GCA 90 bp CATGAGTTGATCACTGAGGAGGTTGAGGGATGGGCACACTGGGATCCATTAGAGTTCAGTTTCCACCGCTaGCGGCCATACTTCATGAAA +
Preference number: 4 (lower is better)
Translates to: HELITEEVEGWAHWDPLEFSFHR*RPYFMK
Trigger: TTTCATGAAGTATGGCCGGCAGCGGTGGAAACTGAA...CTCTAATGGATCCCAGTGTGCCCATCCCTCAACCTCCTCAGTGATCAACTCATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR GCA 90 bp CCTGGCATCATGGGAGCAATCCCATTCTCTGGCCTGGAGCATTCTATAATGCTGTTCAGTTTCCACCGCTaGCGGCCATACTTCATGAAA +
Preference number: 4 (lower is better)
Translates to: PGIMGAIPFSGLEHSIMLFSFHR*RPYFMK
Trigger: TTTCATGAAGTATGGCCGGCAGCGGTGGAAACTGAA...CAGCATTATAGAATGCTCCAGGCCAGAGAATGGGATTGCTCCCATGATGCCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR GCA 90 bp GAACTATTTGGCCAGGGAATCCTACCAGTGAGTGATTTCCCTGGGGGCAGTAACTTCAGTTTCCACCGCTaGCGGCCATACTTCATGAAA +
Preference number: 4 (lower is better)
Translates to: ELFGQGILPVSDFPGGSNFSFHR*RPYFMK
Trigger: TTTCATGAAGTATGGCCGGCAGCGGTGGAAACTGAA...GTTACTGCCCCCAGGGAAATCACTCACTGGTAGGATTCCCTGGCCAAATAGTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR GCA 90 bp AATGCCTTGGGCATGACAAGAAGCAGCCCTGCTTCCTCTGGAGCTCTGCCTCAACATCCCAGCTCTGCTTaGCATTTACTTCTATTTTGC +
Preference number: 4 (lower is better)
Translates to: NALGMTRSSPASSGALPQHPSSA*HLLLFC
Trigger: GCAAAATAGAAGTAAATGGCAAGCAGAGCTGGGATG...TTGAGGCAGAGCTCCAGAGGAAGCAGGGCTGCTTCTTGTCATGCCCAAGGCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000645100.1
ENST00000647136.1
CDS-3UTR GCA 90 bp ATGTTTGAACTATTTGGCCAGGGAATCCTACCAGTGAGTGATTTCCCTGGGGGCGCCTCCTCAGACTCTTaGAGAAGTGCTTCTGCAACA +
Preference number: 4 (lower is better)
Translates to: MFELFGQGILPVSDFPGGASSDS*RSASAT
Trigger: TGTTGCAGAAGCACTTCTGCAAGAGTCTGAGGAGGC...GCCCCCAGGGAAATCACTCACTGGTAGGATTCCCTGGCCAAATAGTTCAAACAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR GCA 90 bp ATGGGAGCAATCCCATTCTCTGGCCTGGAGCATTCTATAATGCTGGCCACATGCAGCCTCTTGACCAGCTaGTTTGTGATGTTTCCTTCC +
Preference number: 4 (lower is better)
Translates to: MGAIPFSGLEHSIMLATCSLLTS*FVMFPS
Trigger: GGAAGGAAACATCACAAAGCAGCTGGTCAAGAGGCT...GCATGTGGCCAGCATTATAGAATGCTCCAGGCCAGAGAATGGGATTGCTCCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR GCA 90 bp CTCCACTCCTACTCCATTAGGATTTCTCTGACTTCTAGGTTCCTCCACCTCAAAGTGCAGTACTGGAGGTaGCTGACGATGGTGATGTCC +
Preference number: 4 (lower is better)
Translates to: LHSYSIRISLTSRFLHLKVQYWR*LTMVMS
Trigger: GGACATCACCATCGTCAGGCACCTCCAGTACTGCAC...TTTGAGGTGGAGGAACCTAGAAGTCAGAGAAATCCTAATGGAGTAGGAGTGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR GCA 90 bp CTCCACTCCTACTCCATTAGGATTTCTCTGACTTCTAGGTTCCTCCACCTCAAAAAGCTGGCCTCCAGCTaGTTCATCACTCTGTCCGCT +
Preference number: 4 (lower is better)
Translates to: LHSYSIRISLTSRFLHLKKLASS*FITLSA
Trigger: AGCGGACAGAGTGATGAAGCAGCTGGAGGCCAGCTT...TTTGAGGTGGAGGAACCTAGAAGTCAGAGAAATCCTAATGGAGTAGGAGTGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR GCA 90 bp GATATGTACACGATAAGTTCACAGTTGAAAGAACCATTTGCCAGAAGCCTGGCAGCTGGGCCAGGAGGTTaGTGGGAGCAAGGTCACTCA +
Preference number: 4 (lower is better)
Translates to: DMYTISSQLKEPFARSLAAGPGG*WEQGHS
Trigger: TGAGTGACCTTGCTCCCAGCAACCTCCTGGCCCAGC...TGCCAGGCTTCTGGCAAATGGTTCTTTCAACTGTGAACTTATCGTGTACATATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR GCA 90 bp GAACTATTTGGCCAGGGAATCCTACCAGTGAGTGATTTCCCTGGGGGCAGTAACATTTTTGGAGGCTGCTaGCAAGTAAAGCGTCACAGC +
Preference number: 4 (lower is better)
Translates to: ELFGQGILPVSDFPGGSNIFGGC*QVKRHS
Trigger: GCTGTGACGCTTTACTTGGCAGCAGCCTCCAAAAAT...GTTACTGCCCCCAGGGAAATCACTCACTGGTAGGATTCCCTGGCCAAATAGTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR GCA 90 bp ATGTTTGAACTATTTGGCCAGGGAATCCTACCAGTGAGTGATTTCCCTGGGGGCGCAATTATGGCTCACTaGAGCCTGAATCTTCTGGGC +
Preference number: 4 (lower is better)
Translates to: MFELFGQGILPVSDFPGGAIMAH*SLNLLG
Trigger: GCCCAGAAGATTCAGGCTGCAGTGAGCCATAATTGC...GCCCCCAGGGAAATCACTCACTGGTAGGATTCCCTGGCCAAATAGTTCAAACAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR GCA 90 bp AATGCCTTGGGCATGACAAGAAGCAGCCCTGCTTCCTCTGGAGCTCTGCCTCAATTACAAGCAAAACAATaGCAGTTGCTATGGGCACAG +
Preference number: 4 (lower is better)
Translates to: NALGMTRSSPASSGALPQLQAKQ*QLLWAQ
Trigger: CTGTGCCCATAGCAACTGGCATTGTTTTGCTTGTAA...TTGAGGCAGAGCTCCAGAGGAAGCAGGGCTGCTTCTTGTCATGCCCAAGGCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000645100.1
ENST00000647136.1
CDS-3UTR GCA 90 bp GATAAAATGGCACAATATCTGGGACTGGTTGCAGAAGAATCCAGAGGGAAGTCAGTGATCACAGCTCACTaGAGCCTCAATCTCCCGGGC +
Preference number: 4 (lower is better)
Translates to: DKMAQYLGLVAEESRGKSVITAH*SLNLPG
Trigger: GCCCGGGAGATTGAGGCTGCAGTGAGCTGTGATCAC...TGACTTCCCTCTGGATTCTTCTGCAACCAGTCCCAGATATTGTGCCATTTTATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510784.8
ENST00000540914.5
CDS-3UTR GCA 90 bp ATATTCAAGAGGATGCTGGGGTGGGTCGAATGGGACAAATTCTGCAAGTTAGAAGTGATCACAGCTCACTaGAGCCTCAATCTCCCGGGC +
Preference number: 4 (lower is better)
Translates to: IFKRMLGWVEWDKFCKLEVITAH*SLNLPG
Trigger: GCCCGGGAGATTGAGGCTGCAGTGAGCTGTGATCAC...TTCTAACTTGCAGAATTTGTCCCATTCGACCCACCCCAGCATCCTCTTGAATAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000645100.1
ENST00000647136.1
CDS-3UTR GCA 90 bp ATGGGAGCAATCCCATTCTCTGGCCTGGAGCATTCTATAATGCTGGCCACATGCACTGCTATATCCCTCTaGCTAGTGCTCACCCCAAAA +
Preference number: 4 (lower is better)
Translates to: MGAIPFSGLEHSIMLATCTAISL*LVLTPK
Trigger: TTTTGGGGTGAGCACTAGGCAGAGGGATATAGCAGT...GCATGTGGCCAGCATTATAGAATGCTCCAGGCCAGAGAATGGGATTGCTCCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510784.8
ENST00000540914.5
CDS-3UTR GCA 90 bp GGGACTGGTTGCAGAAGAATCCAGAGGGAAGTCAGCAGGTTGAAGAATAGGAAATGCAAAAAGTGCGCGTaGCCCTTTCGCTCAGCAACT +
Preference number: 4 (lower is better)
Translates to: GTGCRRIQREVSRLKNRKCKKCA*PFRSAT
Trigger: AGTTGCTGAGCGAAAGGGGCACGCGCACTTTTTGCA...TTTCCTATTCTTCAACCTGCTGACTTCCCTCTGGATTCTTCTGCAACCAGTCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000643623.1
CDS-3UTR CCA 90 bp GAGCATTCTATAATGCTGGCCACATGCAGAAACATTACAAGCAAAACAATGCCACTGAGCTGGCTCACTTaGGTGAAGGGGACCCCGGGA +
Preference number: 4 (lower is better)
Translates to: EHSIMLATCRNITSKTMPLSWLT*VKGTPG
Trigger: TCCCGGGGTCCCCTTCACCCAAGTGAGCCAGCTCAG...TGGCATTGTTTTGCTTGTAATGTTTCTGCATGTGGCCAGCATTATAGAATGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000644411.1
CDS-3UTR CCA 90 bp GGGACTGGTTGCAGAAGAATCCAGAGGGAAGTCAGCAGGTTGAAGAATAGGAAACTTGCTTCATTTTGCTaGCACCATCCTGGAGGCGTC +
Preference number: 4 (lower is better)
Translates to: GTGCRRIQREVSRLKNRKLASFC*HHPGGV
Trigger: GACGCCTCCAGGATGGTGCCAGCAAAATGAAGCAAG...TTTCCTATTCTTCAACCTGCTGACTTCCCTCTGGATTCTTCTGCAACCAGTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR CCA 90 bp GCAATCCCATTCTCTGGCCTGGAGCATTCTATAATGCTGGCCACATGCAGAAACCTGCAAACAGCTCTTTaGTCTCACAGGTCACGCTAC +
Preference number: 4 (lower is better)
Translates to: AIPFSGLEHSIMLATCRNLQTAL*SHRSRY
Trigger: GTAGCGTGACCTGTGAGACCAAAGAGCTGTTTGCAG...GTTTCTGCATGTGGCCAGCATTATAGAATGCTCCAGGCCAGAGAATGGGATTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR CCA 90 bp ATCATGGGAGCAATCCCATTCTCTGGCCTGGAGCATTCTATAATGCTGGCCACATACCCTGGCTGTACATaGACATTCTCCTCTGAAGGG +
Preference number: 4 (lower is better)
Translates to: IMGAIPFSGLEHSIMLATYPGCT*TFSSEG
Trigger: CCCTTCAGAGGAGAATGTCCATGTACAGCCAGGGTA...TGTGGCCAGCATTATAGAATGCTCCAGGCCAGAGAATGGGATTGCTCCCATGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR CCA 90 bp ATGTTTGAACTATTTGGCCAGGGAATCCTACCAGTGAGTGATTTCCCTGGGGGCTACCCTGGCTGTACATaGACATTCTCCTCTGAAGGG +
Preference number: 4 (lower is better)
Translates to: MFELFGQGILPVSDFPGGYPGCT*TFSSEG
Trigger: CCCTTCAGAGGAGAATGTCCATGTACAGCCAGGGTA...GCCCCCAGGGAAATCACTCACTGGTAGGATTCCCTGGCCAAATAGTTCAAACAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CCA 90 bp GGGACTGGTTGCAGAAGAATCCAGAGGGAAGTCAGCAGGTTGAAGAATAGGAAAGTTTCCGGGGTACCCTaGCTGTACATGGACATTCTC +
Preference number: 4 (lower is better)
Translates to: GTGCRRIQREVSRLKNRKVSGVP*LYMDIL
Trigger: GAGAATGTCCATGTACAGCCAGGGTACCCCGGAAAC...TTTCCTATTCTTCAACCTGCTGACTTCCCTCTGGATTCTTCTGCAACCAGTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR CCA 90 bp AAATGGCACAATATCTGGGACTGGTTGCAGAAGAATCCAGAGGGAAGTCAGCAGGTTTCCGGGGTACCCTaGCTGTACATGGACATTCTC +
Preference number: 4 (lower is better)
Translates to: KWHNIWDWLQKNPEGSQQVSGVP*LYMDIL
Trigger: GAGAATGTCCATGTACAGCCAGGGTACCCCGGAAAC...CTGCTGACTTCCCTCTGGATTCTTCTGCAACCAGTCCCAGATATTGTGCCATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR CCA 90 bp GGGGTGGGTCGAATGGGACAAATTCTGCAAGTTAGAAGCACTAAATGTCCTCCAGTTTCCGGGGTACCCTaGCTGTACATGGACATTCTC +
Preference number: 4 (lower is better)
Translates to: GVGRMGQILQVRSTKCPPVSGVP*LYMDIL
Trigger: GAGAATGTCCATGTACAGCCAGGGTACCCCGGAAAC...TGGAGGACATTTAGTGCTTCTAACTTGCAGAATTTGTCCCATTCGACCCACCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR CCA 90 bp GATAAGTTCACAGTTGAAAGAACCATTTGCCAGAAGCCTGGCAAACAATTTGCACCGCCTGGGCTTGTCTaGGGAAGGATGCAGCCACCT +
Preference number: 4 (lower is better)
Translates to: DKFTVERTICQKPGKQFAPPGLV*GRMQPP
Trigger: AGGTGGCTGCATCCTTCCCCAGACAAGCCCAGGCGG...TGCAAATTGTTTGCCAGGCTTCTGGCAAATGGTTCTTTCAACTGTGAACTTATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259698.9
ENST00000613507.4
CDS-3UTR CCA 90 bp GAGCATTCTATAATGCTGGCCACATGCAGAAACATTACAAGCAAAACAATGCCACCGCCTGGGCTTGTCTaGGGAAGGATGCAGCCACCT +
Preference number: 4 (lower is better)
Translates to: EHSIMLATCRNITSKTMPPPGLV*GRMQPP
Trigger: AGGTGGCTGCATCCTTCCCCAGACAAGCCCAGGCGG...TGGCATTGTTTTGCTTGTAATGTTTCTGCATGTGGCCAGCATTATAGAATGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644411.1
CDS-3UTR CCA 90 bp CATTTTTATTTCAGTTGTCGTGTCTCTCAGGCTCTAAACAATTTCCAGCCCAAAGGGGAGCCTGTTGAGTaGGAGGTGAGGGCGCAGTCC +
Preference number: 4 (lower is better)
Translates to: HFYFSCRVSQALNNFQPKGEPVE*EVRAQS
Trigger: GGACTGCGCCCTCACCTCCCACTCAACAGGCTCCCC...TTTGGGCTGGAAATTGTTTAGAGCCTGAGAGACACGACAACTGAAATAAAAATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CCA 90 bp ATTACACTCACATATATTGTTTTGATACCTTGGCATACCCCACCTTGTACACTCGGGGAGCCTGTTGAGTaGGAGGTGAGGGCGCAGTCC +
Preference number: 4 (lower is better)
Translates to: ITLTYIVLIPWHTPPCTLGEPVE*EVRAQS
Trigger: GGACTGCGCCCTCACCTCCCACTCAACAGGCTCCCC...GAGTGTACAAGGTGGGGTATGCCAAGGTATCAAAACAATATATGTGAGTGTAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CCA 90 bp GAACTATTTGGCCAGGGAATCCTACCAGTGAGTGATTTCCCTGGGGGCAGTAACTGGAAGATGCTGAGCTaGTGTCATCCATACCCTCAT +
Preference number: 4 (lower is better)
Translates to: ELFGQGILPVSDFPGGSNWKMLS*CHPYPH
Trigger: ATGAGGGTATGGATGACACCAGCTCAGCATCTTCCA...GTTACTGCCCCCAGGGAAATCACTCACTGGTAGGATTCCCTGGCCAAATAGTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CCA 90 bp CATGAGTTGATCACTGAGGAGGTTGAGGGATGGGCACACTGGGATCCATTAGAGTGGAAGATGCTGAGCTaGTGTCATCCATACCCTCAT +
Preference number: 4 (lower is better)
Translates to: HELITEEVEGWAHWDPLEWKMLS*CHPYPH
Trigger: ATGAGGGTATGGATGACACCAGCTCAGCATCTTCCA...CTCTAATGGATCCCAGTGTGCCCATCCCTCAACCTCCTCAGTGATCAACTCATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR CCA 90 bp CCTGGCATCATGGGAGCAATCCCATTCTCTGGCCTGGAGCATTCTATAATGCTGTGGAAGATGCTGAGCTaGTGTCATCCATACCCTCAT +
Preference number: 4 (lower is better)
Translates to: PGIMGAIPFSGLEHSIMLWKMLS*CHPYPH
Trigger: ATGAGGGTATGGATGACACCAGCTCAGCATCTTCCA...CAGCATTATAGAATGCTCCAGGCCAGAGAATGGGATTGCTCCCATGATGCCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR CCA 90 bp ATTCAAGAGGATGCTGGGGTGGGTCGAATGGGACAAATTCTGCAAGTTAGAAGCTTTTCTGGGCTCCTCTaGGTCTTCCTCCTTCAGGTG +
Preference number: 4 (lower is better)
Translates to: IQEDAGVGRMGQILQVRSFSGLL*VFLLQV
Trigger: CACCTGAAGGAGGAAGACCCAGAGGAGCCCAGAAAA...GCTTCTAACTTGCAGAATTTGTCCCATTCGACCCACCCCAGCATCCTCTTGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR CCA 90 bp GATAAAATGGCACAATATCTGGGACTGGTTGCAGAAGAATCCAGAGGGAAGTCACCGAGGCAGGTTTTCTaGGCTCCTCTGGGTCTTCCT +
Preference number: 4 (lower is better)
Translates to: DKMAQYLGLVAEESRGKSPRQVF*APLGLP
Trigger: AGGAAGACCCAGAGGAGCCCAGAAAACCTGCCTCGG...TGACTTCCCTCTGGATTCTTCTGCAACCAGTCCCAGATATTGTGCCATTTTATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR CCA 90 bp GTACAACCATGGATAAAATGGCACAATATCTGGGACTGGTTGCAGAAGAATCCAGCGGCAAGCCTCAGATaGGGCCGAGGCAGGTTTTCT +
Preference number: 4 (lower is better)
Translates to: VQPWIKWHNIWDWLQKNPAASLR*GRGRFS
Trigger: AGAAAACCTGCCTCGGCCCCATCTGAGGCTTGCCGC...TGGATTCTTCTGCAACCAGTCCCAGATATTGTGCCATTTTATCCATGGTTGTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
CDS-3UTR CCA 90 bp CTCCACTCCTACTCCATTAGGATTTCTCTGACTTCTAGGTTCCTCCACCTCAAACCTGTCTGTGGCCATTaGCACCTCTGCAGATGTGAG +
Preference number: 4 (lower is better)
Translates to: LHSYSIRISLTSRFLHLKPVCGH*HLCRCE
Trigger: CTCACATCTGCAGAGGTGCCAATGGCCACAGACAGG...TTTGAGGTGGAGGAACCTAGAAGTCAGAGAAATCCTAATGGAGTAGGAGTGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CCA 90 bp TGCAGAAGAATCCAGAGGGAAGTCAGCAGGTTGAAGAATAGGAAACAAGATTGGAGAGCAGCCTGTCTGTaGCCATTGGCACCTCTGCAG +
Preference number: 4 (lower is better)
Translates to: CRRIQREVSRLKNRKQDWRAACL*PLAPLQ
Trigger: CTGCAGAGGTGCCAATGGCCACAGACAGGCTGCTCT...CCAATCTTGTTTCCTATTCTTCAACCTGCTGACTTCCCTCTGGATTCTTCTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR CCA 90 bp ATAAAATGGCACAATATCTGGGACTGGTTGCAGAAGAATCCAGAGGGAAGTCAGAGAGCAGCCTGTCTGTaGCCATTGGCACCTCTGCAG +
Preference number: 4 (lower is better)
Translates to: IKWHNIWDWLQKNPEGSQRAACL*PLAPLQ
Trigger: CTGCAGAGGTGCCAATGGCCACAGACAGGCTGCTCT...CTGACTTCCCTCTGGATTCTTCTGCAACCAGTCCCAGATATTGTGCCATTTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR CCA 90 bp CTCCACTCCTACTCCATTAGGATTTCTCTGACTTCTAGGTTCCTCCACCTCAAACATCACTCTGTCCGCTaGGCTGTGGTAGACACCAAC +
Preference number: 4 (lower is better)
Translates to: LHSYSIRISLTSRFLHLKHHSVR*AVVDTN
Trigger: GTTGGTGTCTACCACAGCCCAGCGGACAGAGTGATG...TTTGAGGTGGAGGAACCTAGAAGTCAGAGAAATCCTAATGGAGTAGGAGTGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CCA 90 bp CTCCACTCCTACTCCATTAGGATTTCTCTGACTTCTAGGTTCCTCCACCTCAAAGCCCGGTCCAGAATTTaGGACACCAGGGTTCGAAAC +
Preference number: 4 (lower is better)
Translates to: LHSYSIRISLTSRFLHLKARSRI*DTRVRN
Trigger: GTTTCGAACCCTGGTGTCCCAAATTCTGGACCGGGC...TTTGAGGTGGAGGAACCTAGAAGTCAGAGAAATCCTAATGGAGTAGGAGTGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CCA 90 bp CTCCACTCCTACTCCATTAGGATTTCTCTGACTTCTAGGTTCCTCCACCTCAAACCATGGAAACTTGCCTaGCCAGCTGGCTCAGGTAAC +
Preference number: 4 (lower is better)
Translates to: LHSYSIRISLTSRFLHLKPWKLA*PAGSGN
Trigger: GTTACCTGAGCCAGCTGGCCAGGCAAGTTTCCATGG...TTTGAGGTGGAGGAACCTAGAAGTCAGAGAAATCCTAATGGAGTAGGAGTGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CCA 90 bp AATGCCTTGGGCATGACAAGAAGCAGCCCTGCTTCCTCTGGAGCTCTGCCTCAATTTGAAAAGAAGGAGTaGTCTTTGAAGGTGGGCGTT +
Preference number: 4 (lower is better)
Translates to: NALGMTRSSPASSGALPQFEKKE*SLKVGV
Trigger: AACGCCCACCTTCAAAGACCACTCCTTCTTTTCAAA...TTGAGGCAGAGCTCCAGAGGAAGCAGGGCTGCTTCTTGTCATGCCCAAGGCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000645100.1
ENST00000647136.1
CDS-3UTR CCA 90 bp ATGGGAGCAATCCCATTCTCTGGCCTGGAGCATTCTATAATGCTGGCCACATGCCAATGCCAGTTGCTATaGGCACAGAGTTGGAGAGAA +
Preference number: 4 (lower is better)
Translates to: MGAIPFSGLEHSIMLATCQCQLL*AQSWRE
Trigger: TTCTCTCCAACTCTGTGCCCATAGCAACTGGCATTG...GCATGTGGCCAGCATTATAGAATGCTCCAGGCCAGAGAATGGGATTGCTCCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR CCA 90 bp GATATGTACACGATAAGTTCACAGTTGAAAGAACCATTTGCCAGAAGCCTGGCAGTTGCCCAAGCCCTCTaGAGGGCAGCTTCCGCATCT +
Preference number: 4 (lower is better)
Translates to: DMYTISSQLKEPFARSLAVAQAL*RAASAS
Trigger: AGATGCGGAAGCTGCCCTCCAGAGGGCTTGGGCAAC...TGCCAGGCTTCTGGCAAATGGTTCTTTCAACTGTGAACTTATCGTGTACATATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613507.4
CDS-3UTR TCA 90 bp GATAAGTTCACAGTTGAAAGAACCATTTGCCAGAAGCCTGGCAAACAATTTGCATTTCCTGGAGGCCGCTaGAACCCGCAAAGGACTGGC +
Preference number: 4 (lower is better)
Translates to: DKFTVERTICQKPGKQFAFPGGR*NPQRTG
Trigger: GCCAGTCCTTTGCGGGTTTCAGCGGCCTCCAGGAAA...TGCAAATTGTTTGCCAGGCTTCTGGCAAATGGTTCTTTCAACTGTGAACTTATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR TCA 90 bp AAATGGCACAATATCTGGGACTGGTTGCAGAAGAATCCAGAGGGAAGTCAGCAGTGGCCTGAGGCTTCTTaGGAGCGGAGGAATTTTCAA +
Preference number: 4 (lower is better)
Translates to: KWHNIWDWLQKNPEGSQQWPEAS*ERRNFQ
Trigger: TTGAAAATTCCTCCGCTCTCAAGAAGCCTCAGGCCA...CTGCTGACTTCCCTCTGGATTCTTCTGCAACCAGTCCCAGATATTGTGCCATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR TCA 90 bp AAATGGCACAATATCTGGGACTGGTTGCAGAAGAATCCAGAGGGAAGTCAGCAGTCCAGCTCCGTCTGGTaGACCTCCAGATATTCATCA +
Preference number: 4 (lower is better)
Translates to: KWHNIWDWLQKNPEGSQQSSSVW*TSRYSS
Trigger: TGATGAATATCTGGAGGTTCACCAGACGGAGCTGGA...CTGCTGACTTCCCTCTGGATTCTTCTGCAACCAGTCCCAGATATTGTGCCATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR TCA 90 bp ATGTTTGAACTATTTGGCCAGGGAATCCTACCAGTGAGTGATTTCCCTGGGGGCCCAGACCTTTCATCTTaGTGGAGAATTCTCCCAGCA +
Preference number: 4 (lower is better)
Translates to: MFELFGQGILPVSDFPGGPDLSS*WRILPA
Trigger: TGCTGGGAGAATTCTCCATCAAGATGAAAGGTCTGG...GCCCCCAGGGAAATCACTCACTGGTAGGATTCCCTGGCCAAATAGTTCAAACAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR TCA 90 bp ATCATGGGAGCAATCCCATTCTCTGGCCTGGAGCATTCTATAATGCTGGCCACACCAGACCTTTCATCTTaGTGGAGAATTCTCCCAGCA +
Preference number: 4 (lower is better)
Translates to: IMGAIPFSGLEHSIMLATPDLSS*WRILPA
Trigger: TGCTGGGAGAATTCTCCATCAAGATGAAAGGTCTGG...TGTGGCCAGCATTATAGAATGCTCCAGGCCAGAGAATGGGATTGCTCCCATGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR TCA 90 bp AAACCATGTCAACCACAAAGCCTTGGGAAACAGAACTGCTATATCCCTCTGCCTCTACCTACCAGGATGTaGGTTGCTAGCCCTTTGAGC +
Preference number: 4 (lower is better)
Translates to: KPCQPQSLGKQNCYIPLPLPTRM*VASPLS
Trigger: GCTCAAAGGGCTAGCAACTCACATCCTGGTAGGTAG...AGGCAGAGGGATATAGCAGTTCTGTTTCCCAAGGCTTTGTGGTTGACATGGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510784.8
ENST00000540914.5
CDS-3UTR TCA 90 bp GATAAGTTCACAGTTGAAAGAACCATTTGCCAGAAGCCTGGCAAACAATTTGCATCGACAGCCACTACCTaGGGTCGGGCTGCAAACAGC +
Preference number: 4 (lower is better)
Translates to: DKFTVERTICQKPGKQFASTATT*GRAANS
Trigger: GCTGTTTGCAGCCCGACCTCAGGTAGTGGCTGTCGA...TGCAAATTGTTTGCCAGGCTTCTGGCAAATGGTTCTTTCAACTGTGAACTTATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR TCA 90 bp GAGCATTCTATAATGCTGGCCACATGCAGAAACATTACAAGCAAAACAATGCCACTTGTTCCCAGCGCCTaGGGATGCGGTCATGTCCTC +
Preference number: 4 (lower is better)
Translates to: EHSIMLATCRNITSKTMPLVPSA*GCGHVL
Trigger: GAGGACATGACCGCATCCTCAGGCGCTGGGAACAAG...TGGCATTGTTTTGCTTGTAATGTTTCTGCATGTGGCCAGCATTATAGAATGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR TCA 90 bp GTACAACCATGGATAAAATGGCACAATATCTGGGACTGGTTGCAGAAGAATCCAAGAAGGAGTGGTCTTTaGAGGTGGGCGTTTCCGGGG +
Preference number: 4 (lower is better)
Translates to: VQPWIKWHNIWDWLQKNPRRSGL*RWAFPG
Trigger: CCCCGGAAACGCCCACCTTCAAAGACCACTCCTTCT...TGGATTCTTCTGCAACCAGTCCCAGATATTGTGCCATTTTATCCATGGTTGTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
CDS-3UTR TCA 90 bp GATATGTACACGATAAGTTCACAGTTGAAAGAACCATTTGCCAGAAGCCTGGCAAGAAGGAGTGGTCTTTaGAGGTGGGCGTTTCCGGGG +
Preference number: 4 (lower is better)
Translates to: DMYTISSQLKEPFARSLARRSGL*RWAFPG
Trigger: CCCCGGAAACGCCCACCTTCAAAGACCACTCCTTCT...TGCCAGGCTTCTGGCAAATGGTTCTTTCAACTGTGAACTTATCGTGTACATATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR TCA 90 bp GAACTATTTGGCCAGGGAATCCTACCAGTGAGTGATTTCCCTGGGGGCAGTAACAATTTCTGGATTTGTTaGGTTGGAAGGGGAGCCTGT +
Preference number: 4 (lower is better)
Translates to: ELFGQGILPVSDFPGGSNNFWIC*VGRGAC
Trigger: ACAGGCTCCCCTTCCAACTCAACAAATCCAGAAATT...GTTACTGCCCCCAGGGAAATCACTCACTGGTAGGATTCCCTGGCCAAATAGTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR TCA 90 bp AAAATGGCACAATATCTGGGACTGGTTGCAGAAGAATCCAGAGGGAAGTCAGCAGTTCCTGGAAGATGCTaGGCTGGTGTCATCCATACC +
Preference number: 4 (lower is better)
Translates to: KMAQYLGLVAEESRGKSAVPGRC*AGVIHT
Trigger: GGTATGGATGACACCAGCTCAGCATCTTCCAGGAAC...TGCTGACTTCCCTCTGGATTCTTCTGCAACCAGTCCCAGATATTGTGCCATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR TCA 90 bp CTCCACTCCTACTCCATTAGGATTTCTCTGACTTCTAGGTTCCTCCACCTCAAATTCCTCCTTCAGGTGTaGCTTTGGCTCTTGGCCTTC +
Preference number: 4 (lower is better)
Translates to: LHSYSIRISLTSRFLHLKFLLQV*LWLLAF
Trigger: GAAGGCCAAGAGCCAAAGTCACACCTGAAGGAGGAA...TTTGAGGTGGAGGAACCTAGAAGTCAGAGAAATCCTAATGGAGTAGGAGTGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR TCA 90 bp ATATACAGATATGTACACGATAAGTTCACAGTTGAAAGAACCATTTGCCAGAAGCTCAGCCCCAGCACCTaGGGACTGTCGGCGGCAAGC +
Preference number: 4 (lower is better)
Translates to: IYRYVHDKFTVERTICQKLSPST*GLSAAS
Trigger: GCTTGCCGCCGACAGTCCTCAGGTGCTGGGGCTGAG...CTTCTGGCAAATGGTTCTTTCAACTGTGAACTTATCGTGTACATATCTGTATAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR TCA 90 bp GAACTATTTGGCCAGGGAATCCTACCAGTGAGTGATTTCCCTGGGGGCAGTAACGCACTTGGTCCAGAATaGCAGCAAAGACAGCTTTTT +
Preference number: 4 (lower is better)
Translates to: ELFGQGILPVSDFPGGSNALGPE*QQRQLF
Trigger: AAAAAGCTGTCTTTGCTGTCATTCTGGACCAAGTGC...GTTACTGCCCCCAGGGAAATCACTCACTGGTAGGATTCCCTGGCCAAATAGTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR TCA 90 bp GAACTATTTGGCCAGGGAATCCTACCAGTGAGTGATTTCCCTGGGGGCAGTAACCTGGATATTCTTTGTTaGCAGTTCTGGCAAAGCTGG +
Preference number: 4 (lower is better)
Translates to: ELFGQGILPVSDFPGGSNLDILC*QFWQSW
Trigger: CCAGCTTTGCCAGAACTGTCAACAAAGAATATCCAG...GTTACTGCCCCCAGGGAAATCACTCACTGGTAGGATTCCCTGGCCAAATAGTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR TCA 90 bp ATGTTTGAACTATTTGGCCAGGGAATCCTACCAGTGAGTGATTTCCCTGGGGGCAGTGATTGCAGAGTCTaGACCATGGAAACTTGCCTG +
Preference number: 4 (lower is better)
Translates to: MFELFGQGILPVSDFPGGSDCRV*TMETCL
Trigger: CAGGCAAGTTTCCATGGTTCAGACTCTGCAATCACT...GCCCCCAGGGAAATCACTCACTGGTAGGATTCCCTGGCCAAATAGTTCAAACAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR TCA 90 bp GAACTATTTGGCCAGGGAATCCTACCAGTGAGTGATTTCCCTGGGGGCAGTAACATGGGACCTGATGTTTaGACTATTTGGCCAGGGAAT +
Preference number: 4 (lower is better)
Translates to: ELFGQGILPVSDFPGGSNMGPDV*TIWPGN
Trigger: ATTCCCTGGCCAAATAGTTCAAACATCAGGTCCCAT...GTTACTGCCCCCAGGGAAATCACTCACTGGTAGGATTCCCTGGCCAAATAGTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR TCA 90 bp GTGATTTCCCTGGGGGCAGTAACCACCCCTCAGGATGTCCTTCTTTCTAATCCCAGCAATAATGGGACCTaGTGTTTGAACTATTTGGCC +
Preference number: 4 (lower is better)
Translates to: VISLGAVTTPQDVLLSNPSNNGT*CLNYLA
Trigger: GGCCAAATAGTTCAAACATCAGGTCCCATTATTGCT...GGGATTAGAAAGAAGGACATCCTGAGGGGTGGTTACTGCCCCCAGGGAAATCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR TCA 90 bp GGGACTGGTTGCAGAAGAATCCAGAGGGAAGTCAGCAGGTTGAAGAATAGGAAAAGTTACTGCCCAGATTaGAGACTCCAAAGTGGGCAG +
Preference number: 4 (lower is better)
Translates to: GTGCRRIQREVSRLKNRKSYCPD*RLQSGQ
Trigger: CTGCCCACTTTGGAGTCTTCAATCTGGGCAGTAACT...TTTCCTATTCTTCAACCTGCTGACTTCCCTCTGGATTCTTCTGCAACCAGTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378023.8
ENST00000540914.5
CDS-3UTR TCA 90 bp ACAATATCTGGGACTGGTTGCAGAAGAATCCAGAGGGAAGTCAGCAGGTTGAAGAGATTGGCCATGAGTTaGTCACTGAGGAGGTTGAGG +
Preference number: 4 (lower is better)
Translates to: TISGTGCRRIQREVSRLKRLAMS*SLRRLR
Trigger: CCTCAACCTCCTCAGTGATCAACTCATGGCCAATCT...CTTCAACCTGCTGACTTCCCTCTGGATTCTTCTGCAACCAGTCCCAGATATTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR TCA 90 bp GGCATCATGGGAGCAATCCCATTCTCTGGCCTGGAGCATTCTATAATGCTGGCCGCACCATTTAGTTTCTaGTCGTCAAGGTGTTTAGCA +
Preference number: 4 (lower is better)
Translates to: GIMGAIPFSGLEHSIMLAAPFSF*SSRCLA
Trigger: TGCTAAACACCTTGACGATCAGAAACTAAATGGTGC...GGCCAGCATTATAGAATGCTCCAGGCCAGAGAATGGGATTGCTCCCATGATGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR TCA 90 bp ATCATGGGAGCAATCCCATTCTCTGGCCTGGAGCATTCTATAATGCTGGCCACACTCCATCCAGTTAGGTaGCACTCCTTGCTGATTTCT +
Preference number: 4 (lower is better)
Translates to: IMGAIPFSGLEHSIMLATLHPVR*HSLLIS
Trigger: AGAAATCAGCAAGGAGTGTCACCTAACTGGATGGAG...TGTGGCCAGCATTATAGAATGCTCCAGGCCAGAGAATGGGATTGCTCCCATGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR GCA 90 bp GGCCATGAGTTGATCACTGAGGAGGTTGAGGGATGGGCACACTGGGATCCATTATCTCCATCCCAGCTCTaGTTGCCATTTACTTCTATT +
Preference number: 4 (lower is better)
Translates to: GHELITEEVEGWAHWDPLSPSQL*LPFTSI
Trigger: AATAGAAGTAAATGGCAAGCAGAGCTGGGATGGAGA...TAATGGATCCCAGTGTGCCCATCCCTCAACCTCCTCAGTGATCAACTCATGGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR GCA 90 bp GGCATCATGGGAGCAATCCCATTCTCTGGCCTGGAGCATTCTATAATGCTGGCCTCTCCATCCCAGCTCTaGTTGCCATTTACTTCTATT +
Preference number: 4 (lower is better)
Translates to: GIMGAIPFSGLEHSIMLASPSQL*LPFTSI
Trigger: AATAGAAGTAAATGGCAAGCAGAGCTGGGATGGAGA...GGCCAGCATTATAGAATGCTCCAGGCCAGAGAATGGGATTGCTCCCATGATGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR GCA 90 bp CCTGGCATCATGGGAGCAATCCCATTCTCTGGCCTGGAGCATTCTATAATGCTGGCAAAGAAAGTGTCTTaGAAGGCACTCAAGACAGAC +
Preference number: 4 (lower is better)
Translates to: PGIMGAIPFSGLEHSIMLAKKVS*KALKTD
Trigger: GTCTGTCTTGAGTGCCTTGCAAGACACTTTCTTTGC...CAGCATTATAGAATGCTCCAGGCCAGAGAATGGGATTGCTCCCATGATGCCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644411.1
CDS-3UTR GCA 90 bp AAGTGGCAATGTCTTCGGTGTTTTACAAAAGGCGCTAGCTATCTAAGGCATCTGTTCTCAAGGAACAGGTaGTCAGCCCCAGCACCTGAG +
Preference number: 4 (lower is better)
Translates to: KWQCLRCFTKGASYLRHLFSRNR*SAPAPE
Trigger: CTCAGGTGCTGGGGCTGAGCACCTGTTCCTTGAGAA...CAGATGCCTTAGATAGCTAGCGCCTTTTGTAAAACACCGAAGACATTGCCACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000510784.8
ENST00000540914.5
CDS-3UTR GCA 90 bp GATAAAATGGCACAATATCTGGGACTGGTTGCAGAAGAATCCAGAGGGAAGTCATTCTCAAGGAACAGGTaGTCAGCCCCAGCACCTGAG +
Preference number: 4 (lower is better)
Translates to: DKMAQYLGLVAEESRGKSFSRNR*SAPAPE
Trigger: CTCAGGTGCTGGGGCTGAGCACCTGTTCCTTGAGAA...TGACTTCCCTCTGGATTCTTCTGCAACCAGTCCCAGATATTGTGCCATTTTATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR GCA 90 bp ATCATGGGAGCAATCCCATTCTCTGGCCTGGAGCATTCTATAATGCTGGCCACAAGCCTCTTGACCAGCTaGTTTGTGATGTTTCCTTCC +
Preference number: 4 (lower is better)
Translates to: IMGAIPFSGLEHSIMLATSLLTS*FVMFPS
Trigger: GGAAGGAAACATCACAAAGCAGCTGGTCAAGAGGCT...TGTGGCCAGCATTATAGAATGCTCCAGGCCAGAGAATGGGATTGCTCCCATGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR GCA 90 bp GATAAAATGGCACAATATCTGGGACTGGTTGCAGAAGAATCCAGAGGGAAGTCAGGCCATTGGCACCTCTaGAGATGTGAGCCTCTTGAC +
Preference number: 4 (lower is better)
Translates to: DKMAQYLGLVAEESRGKSGHWHL*RCEPLD
Trigger: GTCAAGAGGCTCACATCTGCAGAGGTGCCAATGGCC...TGACTTCCCTCTGGATTCTTCTGCAACCAGTCCCAGATATTGTGCCATTTTATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR GCA 90 bp TGCAGAAGAATCCAGAGGGAAGTCAGCAGGTTGAAGAATAGGAAACAAGATTGGGGCCATTGGCACCTCTaGAGATGTGAGCCTCTTGAC +
Preference number: 4 (lower is better)
Translates to: CRRIQREVSRLKNRKQDWGHWHL*RCEPLD
Trigger: GTCAAGAGGCTCACATCTGCAGAGGTGCCAATGGCC...CCAATCTTGTTTCCTATTCTTCAACCTGCTGACTTCCCTCTGGATTCTTCTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR GCA 90 bp TGGATAAAATGGCACAATATCTGGGACTGGTTGCAGAAGAATCCAGAGGGAAGTGGCCATTGGCACCTCTaGAGATGTGAGCCTCTTGAC +
Preference number: 4 (lower is better)
Translates to: WIKWHNIWDWLQKNPEGSGHWHL*RCEPLD
Trigger: GTCAAGAGGCTCACATCTGCAGAGGTGCCAATGGCC...ACTTCCCTCTGGATTCTTCTGCAACCAGTCCCAGATATTGTGCCATTTTATCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR GCA 90 bp GAACTATTTGGCCAGGGAATCCTACCAGTGAGTGATTTCCCTGGGGGCAGTAACCATCTAGAAAGGATCTaGAGCCTTCAGATTCTCCAC +
Preference number: 4 (lower is better)
Translates to: ELFGQGILPVSDFPGGSNHLERI*SLQILH
Trigger: GTGGAGAATCTGAAGGCTGCAGATCCTTTCTAGATG...GTTACTGCCCCCAGGGAAATCACTCACTGGTAGGATTCCCTGGCCAAATAGTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR GCA 90 bp CCTGGCATCATGGGAGCAATCCCATTCTCTGGCCTGGAGCATTCTATAATGCTGCATCTAGAAAGGATCTaGAGCCTTCAGATTCTCCAC +
Preference number: 4 (lower is better)
Translates to: PGIMGAIPFSGLEHSIMLHLERI*SLQILH
Trigger: GTGGAGAATCTGAAGGCTGCAGATCCTTTCTAGATG...CAGCATTATAGAATGCTCCAGGCCAGAGAATGGGATTGCTCCCATGATGCCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR GCA 90 bp GATATGTACACGATAAGTTCACAGTTGAAAGAACCATTTGCCAGAAGCCTGGCATGGGAGAGGACTTCCTaGCACACTGGTCCCAACTCC +
Preference number: 4 (lower is better)
Translates to: DMYTISSQLKEPFARSLAWERTS*HTGPNS
Trigger: GGAGTTGGGACCAGTGTGGCAGGAAGTCCTCTCCCA...TGCCAGGCTTCTGGCAAATGGTTCTTTCAACTGTGAACTTATCGTGTACATATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR GCA 90 bp GAACTATTTGGCCAGGGAATCCTACCAGTGAGTGATTTCCCTGGGGGCAGTAACGAGAAAACAATTTGCTaGACGAGTTGGGTGCAGTAC +
Preference number: 4 (lower is better)
Translates to: ELFGQGILPVSDFPGGSNEKTIC*TSWVQY
Trigger: GTACTGCACCCAACTCGTGCAGCAAATTGTTTTCTC...GTTACTGCCCCCAGGGAAATCACTCACTGGTAGGATTCCCTGGCCAAATAGTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR GCA 90 bp CTCCACTCCTACTCCATTAGGATTTCTCTGACTTCTAGGTTCCTCCACCTCAAAAGACACCAACAGGGCTaGAGCACTTGGTCCAGAATG +
Preference number: 4 (lower is better)
Translates to: LHSYSIRISLTSRFLHLKRHQQG*STWSRM
Trigger: CATTCTGGACCAAGTGCTGCAGCCCTGTTGGTGTCT...TTTGAGGTGGAGGAACCTAGAAGTCAGAGAAATCCTAATGGAGTAGGAGTGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR GCA 90 bp GTGATTTCCCTGGGGGCAGTAACCACCCCTCAGGATGTCCTTCTTTCTAATCCCTCGAAACACTGGGTCTaGAAGTCCTGGATATTCTTT +
Preference number: 4 (lower is better)
Translates to: VISLGAVTTPQDVLLSNPSKHWV*KSWIFF
Trigger: AAAGAATATCCAGGACTTGCAGACCCAGTGTTTCGA...GGGATTAGAAAGAAGGACATCCTGAGGGGTGGTTACTGCCCCCAGGGAAATCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR GCA 90 bp GATAAGTTCACAGTTGAAAGAACCATTTGCCAGAAGCCTGGCAAACAATTTGCAGCTGGGCCAGGAGGTTaGTGGGAGCAAGGTCACTCA +
Preference number: 4 (lower is better)
Translates to: DKFTVERTICQKPGKQFAAGPGG*WEQGHS
Trigger: TGAGTGACCTTGCTCCCAGCAACCTCCTGGCCCAGC...TGCAAATTGTTTGCCAGGCTTCTGGCAAATGGTTCTTTCAACTGTGAACTTATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR GCA 90 bp GATATGTACACGATAAGTTCACAGTTGAAAGAACCATTTGCCAGAAGCCTGGCAGTCCTGAGTACTTCCTaGTGGGCCAGGAGGTTGCTG +
Preference number: 4 (lower is better)
Translates to: DMYTISSQLKEPFARSLAVLSTS*WARRLL
Trigger: CAGCAACCTCCTGGCCCAGCAGGAAGTACTCAGGAC...TGCCAGGCTTCTGGCAAATGGTTCTTTCAACTGTGAACTTATCGTGTACATATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR GCA 90 bp ATGTTTGAACTATTTGGCCAGGGAATCCTACCAGTGAGTGATTTCCCTGGGGGCATTTTTGGAGGCTGCTaGCAAGTAAAGCGTCACAGC +
Preference number: 4 (lower is better)
Translates to: MFELFGQGILPVSDFPGGIFGGC*QVKRHS
Trigger: GCTGTGACGCTTTACTTGGCAGCAGCCTCCAAAAAT...GCCCCCAGGGAAATCACTCACTGGTAGGATTCCCTGGCCAAATAGTTCAAACAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR GCA 90 bp AAATGGCACAATATCTGGGACTGGTTGCAGAAGAATCCAGAGGGAAGTCAGCAGCCTCCTCCCCCATGTTaGTGCAGGTTTTTAAATCCC +
Preference number: 4 (lower is better)
Translates to: KWHNIWDWLQKNPEGSQQPPPPC*CRFLNP
Trigger: GGGATTTAAAAACCTGCAGCAACATGGGGGAGGAGG...CTGCTGACTTCCCTCTGGATTCTTCTGCAACCAGTCCCAGATATTGTGCCATTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000378023.8
ENST00000540914.5
CDS-3UTR GCA 90 bp AGGGCCTTGCAGGGATCTGTCTCTGACACTCAAGATGGCACAAAAGCACATGGGACAAATCGGTATGTTTaGAGAGTGTCGACAATTGCC +
Preference number: 4 (lower is better)
Translates to: RALQGSVSDTQDGTKAHGTNRYV*RVSTIA
Trigger: GGCAATTGTCGACACTCTGCAAACATACCGATTTGT...CCCATGTGCTTTTGTGCCATCTTGAGTGTCAGAGACAGATCCCTGCAAGGCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540914.5
CDS-3UTR GCA 90 bp AGGGCCTTGCAGGGATCTGTCTCTGACACTCAAGATGGCACAAAAGCACATGGGTTACAAGCAAAACAATaGCAGTTGCTATGGGCACAG +
Preference number: 4 (lower is better)
Translates to: RALQGSVSDTQDGTKAHGLQAKQ*QLLWAQ
Trigger: CTGTGCCCATAGCAACTGGCATTGTTTTGCTTGTAA...CCCATGTGCTTTTGTGCCATCTTGAGTGTCAGAGACAGATCCCTGCAAGGCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR GCA 90 bp GTACAACCATGGATAAAATGGCACAATATCTGGGACTGGTTGCAGAAGAATCCAGTGATCACAGCTCACTaGAGCCTCAATCTCCCGGGC +
Preference number: 4 (lower is better)
Translates to: VQPWIKWHNIWDWLQKNPVITAH*SLNLPG
Trigger: GCCCGGGAGATTGAGGCTGCAGTGAGCTGTGATCAC...TGGATTCTTCTGCAACCAGTCCCAGATATTGTGCCATTTTATCCATGGTTGTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510784.8
ENST00000540914.5
CDS-3UTR CCA 90 bp ATTACACTCACATATATTGTTTTGATACCTTGGCATACCCCACCTTGTACACTCCTGAGCTGGCTCACTTaGGTGAAGGGGACCCCGGGA +
Preference number: 4 (lower is better)
Translates to: ITLTYIVLIPWHTPPCTLLSWLT*VKGTPG
Trigger: TCCCGGGGTCCCCTTCACCCAAGTGAGCCAGCTCAG...GAGTGTACAAGGTGGGGTATGCCAAGGTATCAAAACAATATATGTGAGTGTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000259698.9
CDS-3UTR CCA 90 bp CAGCCCTGCTTCCTCTGGAGCTCTGCCTCAAAGGGAACAAGTCCCACCACTTCCGGATTGTTGTTTTTGTaGCCTAAATTGTGCATTTTC +
Preference number: 4 (lower is better)
Translates to: QPCFLWSSASKGTSPTTSGLLFL*PKLCIF
Trigger: GAAAATGCACAATTTAGGCCACAAAAACAACAATCC...GGAAGTGGTGGGACTTGTTCCCTTTGAGGCAGAGCTCCAGAGGAAGCAGGGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR CCA 90 bp ACTTCCCTGACCAGGCCCTGGCATCATGGGAGCAATCCCATTCTCTGGCCTGGAGGATTGTTGTTTTTGTaGCCTAAATTGTGCATTTTC +
Preference number: 4 (lower is better)
Translates to: TSLTRPWHHGSNPILWPGGLLFL*PKLCIF
Trigger: GAAAATGCACAATTTAGGCCACAAAAACAACAATCC...TCCAGGCCAGAGAATGGGATTGCTCCCATGATGCCAGGGCCTGGTCAGGGAAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR CCA 90 bp TGGATAAAATGGCACAATATCTGGGACTGGTTGCAGAAGAATCCAGAGGGAAGTTTGCTGGCACCATCCTaGAGGCGTCGCTGGATACAA +
Preference number: 4 (lower is better)
Translates to: WIKWHNIWDWLQKNPEGSLLAPS*RRRWIQ
Trigger: TTGTATCCAGCGACGCCTCCAGGATGGTGCCAGCAA...ACTTCCCTCTGGATTCTTCTGCAACCAGTCCCAGATATTGTGCCATTTTATCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR CCA 90 bp CATTTTTATTTCAGTTGTCGTGTCTCTCAGGCTCTAAACAATTTCCAGCCCAAACCCGGGCAGCTTTGCTaGCAGGGGATGTTGCGAAGG +
Preference number: 4 (lower is better)
Translates to: HFYFSCRVSQALNNFQPKPGQLC*QGMLRR
Trigger: CCTTCGCAACATCCCCTGCCAGCAAAGCTGCCCGGG...TTTGGGCTGGAAATTGTTTAGAGCCTGAGAGACACGACAACTGAAATAAAAATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CCA 90 bp GTGATTTCCCTGGGGGCAGTAACCACCCCTCAGGATGTCCTTCTTTCTAATCCCCTAGCTCCACTTCAATaGTGCACATATTCTCTGTGT +
Preference number: 4 (lower is better)
Translates to: VISLGAVTTPQDVLLSNPLAPLQ*CTYSLC
Trigger: ACACAGAGAATATGTGCACCATTGAAGTGGAGCTAG...GGGATTAGAAAGAAGGACATCCTGAGGGGTGGTTACTGCCCCCAGGGAAATCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CCA 90 bp AGGGCCTTGCAGGGATCTGTCTCTGACACTCAAGATGGCACAAAAGCACATGGGCTAGCTCCACTTCAATaGTGCACATATTCTCTGTGT +
Preference number: 4 (lower is better)
Translates to: RALQGSVSDTQDGTKAHGLAPLQ*CTYSLC
Trigger: ACACAGAGAATATGTGCACCATTGAAGTGGAGCTAG...CCCATGTGCTTTTGTGCCATCTTGAGTGTCAGAGACAGATCCCTGCAAGGCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR CCA 90 bp AGAATGAATGCCTTGGGCATGACAAGAAGCAGCCCTGCTTCCTCTGGAGCTCTGCTAGCTCCACTTCAATaGTGCACATATTCTCTGTGT +
Preference number: 4 (lower is better)
Translates to: RMNALGMTRSSPASSGALLAPLQ*CTYSLC
Trigger: ACACAGAGAATATGTGCACCATTGAAGTGGAGCTAG...CAGAGCTCCAGAGGAAGCAGGGCTGCTTCTTGTCATGCCCAAGGCATTCATTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000645100.1
ENST00000647136.1
CDS-3UTR CCA 90 bp GGGACTGGTTGCAGAAGAATCCAGAGGGAAGTCAGCAGGTTGAAGAATAGGAAACTGCAAACAGCTCTTTaGTCTCACAGGTCACGCTAC +
Preference number: 4 (lower is better)
Translates to: GTGCRRIQREVSRLKNRKLQTAL*SHRSRY
Trigger: GTAGCGTGACCTGTGAGACCAAAGAGCTGTTTGCAG...TTTCCTATTCTTCAACCTGCTGACTTCCCTCTGGATTCTTCTGCAACCAGTCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR CCA 90 bp ATAAAATGGCACAATATCTGGGACTGGTTGCAGAAGAATCCAGAGGGAAGTCAGGAAGCTGAGCGACAGTaGCATTTTCTCCTCGGCTGC +
Preference number: 4 (lower is better)
Translates to: IKWHNIWDWLQKNPEGSQEAERQ*HFLLGC
Trigger: GCAGCCGAGGAGAAAATGCCACTGTCGCTCAGCTTC...CTGACTTCCCTCTGGATTCTTCTGCAACCAGTCCCAGATATTGTGCCATTTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR CCA 90 bp AATGGCACAATATCTGGGACTGGTTGCAGAAGAATCCAGAGGGAAGTCAGCAGGCTGGATTTGTTGAGTTaGAAGGGGAGCCTGTTGAGT +
Preference number: 4 (lower is better)
Translates to: NGTISGTGCRRIQREVSRLDLLS*KGSLLS
Trigger: ACTCAACAGGCTCCCCTTCCAACTCAACAAATCCAG...CCTGCTGACTTCCCTCTGGATTCTTCTGCAACCAGTCCCAGATATTGTGCCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR CCA 90 bp ATAAAATGGCACAATATCTGGGACTGGTTGCAGAAGAATCCAGAGGGAAGTCAGTCCATACCCTCATTCTaGGAGGCCAAGCTGCTGAGG +
Preference number: 4 (lower is better)
Translates to: IKWHNIWDWLQKNPEGSQSIPSF*EAKLLR
Trigger: CCTCAGCAGCTTGGCCTCCCAGAATGAGGGTATGGA...CTGACTTCCCTCTGGATTCTTCTGCAACCAGTCCCAGATATTGTGCCATTTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR CCA 90 bp AATGGCACAATATCTGGGACTGGTTGCAGAAGAATCCAGAGGGAAGTCAGCAGGTGGAAGATGCTGAGCTaGTGTCATCCATACCCTCAT +
Preference number: 4 (lower is better)
Translates to: NGTISGTGCRRIQREVSRWKMLS*CHPYPH
Trigger: ATGAGGGTATGGATGACACCAGCTCAGCATCTTCCA...CCTGCTGACTTCCCTCTGGATTCTTCTGCAACCAGTCCCAGATATTGTGCCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR CCA 90 bp ATGTTTGAACTATTTGGCCAGGGAATCCTACCAGTGAGTGATTTCCCTGGGGGCTGGAAGATGCTGAGCTaGTGTCATCCATACCCTCAT +
Preference number: 4 (lower is better)
Translates to: MFELFGQGILPVSDFPGGWKMLS*CHPYPH
Trigger: ATGAGGGTATGGATGACACCAGCTCAGCATCTTCCA...GCCCCCAGGGAAATCACTCACTGGTAGGATTCCCTGGCCAAATAGTTCAAACAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CCA 90 bp ATAAAATGGCACAATATCTGGGACTGGTTGCAGAAGAATCCAGAGGGAAGTCAGCTCCCAGGGAGTTCCTaGAAGATGCTGAGCTGGTGT +
Preference number: 4 (lower is better)
Translates to: IKWHNIWDWLQKNPEGSQLPGSS*KMLSWC
Trigger: ACACCAGCTCAGCATCTTCCAGGAACTCCCTGGGAG...CTGACTTCCCTCTGGATTCTTCTGCAACCAGTCCCAGATATTGTGCCATTTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR CCA 90 bp ATATTCAAGAGGATGCTGGGGTGGGTCGAATGGGACAAATTCTGCAAGTTAGAACTCCCAGGGAGTTCCTaGAAGATGCTGAGCTGGTGT +
Preference number: 4 (lower is better)
Translates to: IFKRMLGWVEWDKFCKLELPGSS*KMLSWC
Trigger: ACACCAGCTCAGCATCTTCCAGGAACTCCCTGGGAG...TTCTAACTTGCAGAATTTGTCCCATTCGACCCACCCCAGCATCCTCTTGAATAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR CCA 90 bp TCTGGCCTGGAGCATTCTATAATGCTGGCCACATGCAGAAACATTACAAGCAAACTCCCAGGGAGTTCCTaGAAGATGCTGAGCTGGTGT +
Preference number: 4 (lower is better)
Translates to: SGLEHSIMLATCRNITSKLPGSS*KMLSWC
Trigger: ACACCAGCTCAGCATCTTCCAGGAACTCCCTGGGAG...TTTGCTTGTAATGTTTCTGCATGTGGCCAGCATTATAGAATGCTCCAGGCCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR CCA 90 bp AAAATGGCACAATATCTGGGACTGGTTGCAGAAGAATCCAGAGGGAAGTCAGCATTTTCTGGGCTCCTCTaGGTCTTCCTCCTTCAGGTG +
Preference number: 4 (lower is better)
Translates to: KMAQYLGLVAEESRGKSAFSGLL*VFLLQV
Trigger: CACCTGAAGGAGGAAGACCCAGAGGAGCCCAGAAAA...TGCTGACTTCCCTCTGGATTCTTCTGCAACCAGTCCCAGATATTGTGCCATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR CCA 90 bp GATAAGTTCACAGTTGAAAGAACCATTTGCCAGAAGCCTGGCAAACAATTTGCAGCGGCAAGCCTCAGATaGGGCCGAGGCAGGTTTTCT +
Preference number: 4 (lower is better)
Translates to: DKFTVERTICQKPGKQFAAASLR*GRGRFS
Trigger: AGAAAACCTGCCTCGGCCCCATCTGAGGCTTGCCGC...TGCAAATTGTTTGCCAGGCTTCTGGCAAATGGTTCTTTCAACTGTGAACTTATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CCA 90 bp GATAAAATGGCACAATATCTGGGACTGGTTGCAGAAGAATCCAGAGGGAAGTCACCTGTCTGTGGCCATTaGCACCTCTGCAGATGTGAG +
Preference number: 4 (lower is better)
Translates to: DKMAQYLGLVAEESRGKSPVCGH*HLCRCE
Trigger: CTCACATCTGCAGAGGTGCCAATGGCCACAGACAGG...TGACTTCCCTCTGGATTCTTCTGCAACCAGTCCCAGATATTGTGCCATTTTATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR CCA 90 bp CTCCACTCCTACTCCATTAGGATTTCTCTGACTTCTAGGTTCCTCCACCTCAAACAGTTCTGGCAAAGCTaGCCTCCAGCTGCTTCATCA +
Preference number: 4 (lower is better)
Translates to: LHSYSIRISLTSRFLHLKQFWQS*PPAASS
Trigger: TGATGAAGCAGCTGGAGGCCAGCTTTGCCAGAACTG...TTTGAGGTGGAGGAACCTAGAAGTCAGAGAAATCCTAATGGAGTAGGAGTGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CCA 90 bp GTGATTTCCCTGGGGGCAGTAACCACCCCTCAGGATGTCCTTCTTTCTAATCCCTGGGTCTGCAAGTCCTaGATATTCTTTGTTGACAGT +
Preference number: 4 (lower is better)
Translates to: VISLGAVTTPQDVLLSNPWVCKS*IFFVDS
Trigger: ACTGTCAACAAAGAATATCCAGGACTTGCAGACCCA...GGGATTAGAAAGAAGGACATCCTGAGGGGTGGTTACTGCCCCCAGGGAAATCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CCA 90 bp GATAAGTTCACAGTTGAAAGAACCATTTGCCAGAAGCCTGGCAAACAATTTGCAGGGCCAGGAGGTTGCTaGGAGCAAGGTCACTCATGG +
Preference number: 4 (lower is better)
Translates to: DKFTVERTICQKPGKQFAGPGGC*EQGHSW
Trigger: CCATGAGTGACCTTGCTCCCAGCAACCTCCTGGCCC...TGCAAATTGTTTGCCAGGCTTCTGGCAAATGGTTCTTTCAACTGTGAACTTATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CCA 90 bp GATATGTACACGATAAGTTCACAGTTGAAAGAACCATTTGCCAGAAGCCTGGCACTGAGTACTTCCTGCTaGGCCAGGAGGTTGCTGGGA +
Preference number: 4 (lower is better)
Translates to: DMYTISSQLKEPFARSLALSTSC*ARRLLG
Trigger: TCCCAGCAACCTCCTGGCCCAGCAGGAAGTACTCAG...TGCCAGGCTTCTGGCAAATGGTTCTTTCAACTGTGAACTTATCGTGTACATATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CCA 90 bp GTGATTTCCCTGGGGGCAGTAACCACCCCTCAGGATGTCCTTCTTTCTAATCCCTTTGAAAAGAAGGAGTaGTCTTTGAAGGTGGGCGTT +
Preference number: 4 (lower is better)
Translates to: VISLGAVTTPQDVLLSNPFEKKE*SLKVGV
Trigger: AACGCCCACCTTCAAAGACCACTCCTTCTTTTCAAA...GGGATTAGAAAGAAGGACATCCTGAGGGGTGGTTACTGCCCCCAGGGAAATCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000538035.6
ENST00000643898.2
CDS-3UTR CCA 90 bp ATAAAATGGCACAATATCTGGGACTGGTTGCAGAAGAATCCAGAGGGAAGTCAGCAGGCCCTGGCATCATaGGAGCAATCCCATTCTCTG +
Preference number: 4 (lower is better)
Translates to: IKWHNIWDWLQKNPEGSQQALAS*EQSHSL
Trigger: CAGAGAATGGGATTGCTCCCATGATGCCAGGGCCTG...CTGACTTCCCTCTGGATTCTTCTGCAACCAGTCCCAGATATTGTGCCATTTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510784.8
ENST00000540914.5
CDS-3UTR CCA 90 bp TGCAGAAGAATCCAGAGGGAAGTCAGCAGGTTGAAGAATAGGAAACAAGATTGGCAGGCCCTGGCATCATaGGAGCAATCCCATTCTCTG +
Preference number: 4 (lower is better)
Translates to: CRRIQREVSRLKNRKQDWQALAS*EQSHSL
Trigger: CAGAGAATGGGATTGCTCCCATGATGCCAGGGCCTG...CCAATCTTGTTTCCTATTCTTCAACCTGCTGACTTCCCTCTGGATTCTTCTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510784.8
ENST00000540914.5
CDS-3UTR CCA 90 bp GAGCATTCTATAATGCTGGCCACATGCAGAAACATTACAAGCAAAACAATGCCATCCCTGACCAGGCCCTaGCATCATGGGAGCAATCCC +
Preference number: 4 (lower is better)
Translates to: EHSIMLATCRNITSKTMPSLTRP*HHGSNP
Trigger: GGGATTGCTCCCATGATGCCAGGGCCTGGTCAGGGA...TGGCATTGTTTTGCTTGTAATGTTTCTGCATGTGGCCAGCATTATAGAATGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR CCA 90 bp CCTGGCATCATGGGAGCAATCCCATTCTCTGGCCTGGAGCATTCTATAATGCTGGTCTTGCAGCTATCCTaGAAGTTAAGTCCAGACGTA +
Preference number: 4 (lower is better)
Translates to: PGIMGAIPFSGLEHSIMLVLQLS*KLSPDV
Trigger: TACGTCTGGACTTAACTTCCAGGATAGCTGCAAGAC...CAGCATTATAGAATGCTCCAGGCCAGAGAATGGGATTGCTCCCATGATGCCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510784.8
CDS-3UTR CCA 90 bp TCTGGCCTGGAGCATTCTATAATGCTGGCCACATGCAGAAACATTACAAGCAAAGCGAAGGTAACACCATaGTCCCAACAGAGCGGCCTA +
Preference number: 4 (lower is better)
Translates to: SGLEHSIMLATCRNITSKAKVTP*SQQSGL
Trigger: TAGGCCGCTCTGTTGGGACCATGGTGTTACCTTCGC...TTTGCTTGTAATGTTTCTGCATGTGGCCAGCATTATAGAATGCTCCAGGCCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510784.8
CDS-3UTR CCA 90 bp TCCAAATATTCAAGAGGATGCTGGGGTGGGTCGAATGGGACAAATTCTGCAAGTGATCCTGTCCCTCCATaGCCTGTTTCTGATCCAGTG +
Preference number: 4 (lower is better)
Translates to: SKYSRGCWGGSNGTNSASDPVPP*PVSDPV
Trigger: CACTGGATCAGAAACAGGCCATGGAGGGACAGGATC...ACTTGCAGAATTTGTCCCATTCGACCCACCCCAGCATCCTCTTGAATATTTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510784.8
CDS-3UTR TCA 90 bp TTTCAACCATTTAACATAAGCTATAGGCTATACCTCCTAACTACAGACTGTACAGCTGGCTCACTTGGGTaGAGGGGACCCCGGGAGGAA +
Preference number: 4 (lower is better)
Translates to: FQPFNISYRLYLLTTDCTAGSLG*RGPREE
Trigger: TTCCTCCCGGGGTCCCCTTCACCCAAGTGAGCCAGC...TGTACAGTCTGTAGTTAGGAGGTATAGCCTATAGCTTATGTTAAATGGTTGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259698.9
CDS-3UTR TCA 90 bp GCAATCCCATTCTCTGGCCTGGAGCATTCTATAATGCTGGCCACATGCAGAAACCGGAGGAATTTTCAATaGAGGAGTTACACCTGGATC +
Preference number: 4 (lower is better)
Translates to: AIPFSGLEHSIMLATCRNRRNFQ*RSYTWI
Trigger: GATCCAGGTGTAACTCCTTCATTGAAAATTCCTCCG...GTTTCTGCATGTGGCCAGCATTATAGAATGCTCCAGGCCAGAGAATGGGATTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR TCA 90 bp CTCCACTCCTACTCCATTAGGATTTCTCTGACTTCTAGGTTCCTCCACCTCAAATGGCCTGAGGCTTCTTaGGAGCGGAGGAATTTTCAA +
Preference number: 4 (lower is better)
Translates to: LHSYSIRISLTSRFLHLKWPEAS*ERRNFQ
Trigger: TTGAAAATTCCTCCGCTCTCAAGAAGCCTCAGGCCA...TTTGAGGTGGAGGAACCTAGAAGTCAGAGAAATCCTAATGGAGTAGGAGTGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR TCA 90 bp TGCAGAAGAATCCAGAGGGAAGTCAGCAGGTTGAAGAATAGGAAACAAGATTGGTTCTTCAGTTTGGCCTaGGGCTTCTTGAGAGCGGAG +
Preference number: 4 (lower is better)
Translates to: CRRIQREVSRLKNRKQDWFFSLA*GFLRAE
Trigger: CTCCGCTCTCAAGAAGCCTCAGGCCAAACTGAAGAA...CCAATCTTGTTTCCTATTCTTCAACCTGCTGACTTCCCTCTGGATTCTTCTGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR TCA 90 bp ATATTCAAGAGGATGCTGGGGTGGGTCGAATGGGACAAATTCTGCAAGTTAGAATTCTTCAGTTTGGCCTaGGGCTTCTTGAGAGCGGAG +
Preference number: 4 (lower is better)
Translates to: IFKRMLGWVEWDKFCKLEFFSLA*GFLRAE
Trigger: CTCCGCTCTCAAGAAGCCTCAGGCCAAACTGAAGAA...TTCTAACTTGCAGAATTTGTCCCATTCGACCCACCCCAGCATCCTCTTGAATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR TCA 90 bp GATAAAATGGCACAATATCTGGGACTGGTTGCAGAAGAATCCAGAGGGAAGTCATTCTTCAGTTTGGCCTaGGGCTTCTTGAGAGCGGAG +
Preference number: 4 (lower is better)
Translates to: DKMAQYLGLVAEESRGKSFFSLA*GFLRAE
Trigger: CTCCGCTCTCAAGAAGCCTCAGGCCAAACTGAAGAA...TGACTTCCCTCTGGATTCTTCTGCAACCAGTCCCAGATATTGTGCCATTTTATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR TCA 90 bp TCCAAATATTCAAGAGGATGCTGGGGTGGGTCGAATGGGACAAATTCTGCAAGTTCCAGCTCCGTCTGGTaGACCTCCAGATATTCATCA +
Preference number: 4 (lower is better)
Translates to: SKYSRGCWGGSNGTNSASSSSVW*TSRYSS
Trigger: TGATGAATATCTGGAGGTTCACCAGACGGAGCTGGA...ACTTGCAGAATTTGTCCCATTCGACCCACCCCAGCATCCTCTTGAATATTTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR TCA 90 bp GGCCATGAGTTGATCACTGAGGAGGTTGAGGGATGGGCACACTGGGATCCATTATTCATATCTTTTAACTaGGCTGTCAACTTGTCCAGC +
Preference number: 4 (lower is better)
Translates to: GHELITEEVEGWAHWDPLFISFN*AVNLSS
Trigger: GCTGGACAAGTTGACAGCTCAGTTAAAAGATATGAA...TAATGGATCCCAGTGTGCCCATCCCTCAACCTCCTCAGTGATCAACTCATGGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR TCA 90 bp GTCTTGAACTCTTGGGCTCCAGCAATCCTGGGCTTCCCAAAGTGTTGGGATTACTCTACCTTACTTATATaGAACTCCAGGCGTCTCATG +
Preference number: 4 (lower is better)
Translates to: VLNSWAPAILGFPKCWDYSTLLI*NSRRLM
Trigger: CATGAGACGCCTGGAGTTTCATATAAGTAAGGTAGA...GTAATCCCAACACTTTGGGAAGCCCAGGATTGCTGGAGCCCAAGAGTTCAAGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000645100.1
ENST00000647136.1
CDS-3UTR TCA 90 bp GAACTATTTGGCCAGGGAATCCTACCAGTGAGTGATTTCCCTGGGGGCAGTAACTCTACCTTACTTATATaGAACTCCAGGCGTCTCATG +
Preference number: 4 (lower is better)
Translates to: ELFGQGILPVSDFPGGSNSTLLI*NSRRLM
Trigger: CATGAGACGCCTGGAGTTTCATATAAGTAAGGTAGA...GTTACTGCCCCCAGGGAAATCACTCACTGGTAGGATTCCCTGGCCAAATAGTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR TCA 90 bp AAATGGCACAATATCTGGGACTGGTTGCAGAAGAATCCAGAGGGAAGTCAGCAGCCAGACCTTTCATCTTaGTGGAGAATTCTCCCAGCA +
Preference number: 4 (lower is better)
Translates to: KWHNIWDWLQKNPEGSQQPDLSS*WRILPA
Trigger: TGCTGGGAGAATTCTCCATCAAGATGAAAGGTCTGG...CTGCTGACTTCCCTCTGGATTCTTCTGCAACCAGTCCCAGATATTGTGCCATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR TCA 90 bp ACAATATCTGGGACTGGTTGCAGAAGAATCCAGAGGGAAGTCAGCAGGTTGAAGCCAGACCTTTCATCTTaGTGGAGAATTCTCCCAGCA +
Preference number: 4 (lower is better)
Translates to: TISGTGCRRIQREVSRLKPDLSS*WRILPA
Trigger: TGCTGGGAGAATTCTCCATCAAGATGAAAGGTCTGG...CTTCAACCTGCTGACTTCCCTCTGGATTCTTCTGCAACCAGTCCCAGATATTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR TCA 90 bp GTGATTTCCCTGGGGGCAGTAACCACCCCTCAGGATGTCCTTCTTTCTAATCCCATGAAAATTTCATATTaGTCTCCAGGACAGAGGCGT +
Preference number: 4 (lower is better)
Translates to: VISLGAVTTPQDVLLSNPMKISY*SPGQRR
Trigger: ACGCCTCTGTCCTGGAGATCAATATGAAATTTTCAT...GGGATTAGAAAGAAGGACATCCTGAGGGGTGGTTACTGCCCCCAGGGAAATCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR TCA 90 bp GGCCATGAGTTGATCACTGAGGAGGTTGAGGGATGGGCACACTGGGATCCATTAATGAAAATTTCATATTaGTCTCCAGGACAGAGGCGT +
Preference number: 4 (lower is better)
Translates to: GHELITEEVEGWAHWDPLMKISY*SPGQRR
Trigger: ACGCCTCTGTCCTGGAGATCAATATGAAATTTTCAT...TAATGGATCCCAGTGTGCCCATCCCTCAACCTCCTCAGTGATCAACTCATGGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR TCA 90 bp AGAATGAATGCCTTGGGCATGACAAGAAGCAGCCCTGCTTCCTCTGGAGCTCTGGCCGGCCATACTTCATaGAAATTTCATATTGATCTC +
Preference number: 4 (lower is better)
Translates to: RMNALGMTRSSPASSGALAGHTS*KFHIDL
Trigger: GAGATCAATATGAAATTTTCATGAAGTATGGCCGGC...CAGAGCTCCAGAGGAAGCAGGGCTGCTTCTTGTCATGCCCAAGGCATTCATTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000645100.1
ENST00000647136.1
CDS-3UTR TCA 90 bp TGCAGAAGAATCCAGAGGGAAGTCAGCAGGTTGAAGAATAGGAAACAAGATTGGCTACCTACCAGGATGTaGGTTGCTAGCCCTTTGAGC +
Preference number: 4 (lower is better)
Translates to: CRRIQREVSRLKNRKQDWLPTRM*VASPLS
Trigger: GCTCAAAGGGCTAGCAACTCACATCCTGGTAGGTAG...CCAATCTTGTTTCCTATTCTTCAACCTGCTGACTTCCCTCTGGATTCTTCTGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR TCA 90 bp TCTGGCCTGGAGCATTCTATAATGCTGGCCACATGCAGAAACATTACAAGCAAACTACCTACCAGGATGTaGGTTGCTAGCCCTTTGAGC +
Preference number: 4 (lower is better)
Translates to: SGLEHSIMLATCRNITSKLPTRM*VASPLS
Trigger: GCTCAAAGGGCTAGCAACTCACATCCTGGTAGGTAG...TTTGCTTGTAATGTTTCTGCATGTGGCCAGCATTATAGAATGCTCCAGGCCAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR TCA 90 bp ATAAAATGGCACAATATCTGGGACTGGTTGCAGAAGAATCCAGAGGGAAGTCAGCTACCTACCAGGATGTaGGTTGCTAGCCCTTTGAGC +
Preference number: 4 (lower is better)
Translates to: IKWHNIWDWLQKNPEGSQLPTRM*VASPLS
Trigger: GCTCAAAGGGCTAGCAACTCACATCCTGGTAGGTAG...CTGACTTCCCTCTGGATTCTTCTGCAACCAGTCCCAGATATTGTGCCATTTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR TCA 90 bp ATTACACTCACATATATTGTTTTGATACCTTGGCATACCCCACCTTGTACACTCTCGACAGCCACTACCTaGGGTCGGGCTGCAAACAGC +
Preference number: 4 (lower is better)
Translates to: ITLTYIVLIPWHTPPCTLSTATT*GRAANS
Trigger: GCTGTTTGCAGCCCGACCTCAGGTAGTGGCTGTCGA...GAGTGTACAAGGTGGGGTATGCCAAGGTATCAAAACAATATATGTGAGTGTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR TCA 90 bp CATTTTTATTTCAGTTGTCGTGTCTCTCAGGCTCTAAACAATTTCCAGCCCAAACTTGTTCCCAGCGCCTaGGGATGCGGTCATGTCCTC +
Preference number: 4 (lower is better)
Translates to: HFYFSCRVSQALNNFQPKLVPSA*GCGHVL
Trigger: GAGGACATGACCGCATCCTCAGGCGCTGGGAACAAG...TTTGGGCTGGAAATTGTTTAGAGCCTGAGAGACACGACAACTGAAATAAAAATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR TCA 90 bp TGCAGAAGAATCCAGAGGGAAGTCAGCAGGTTGAAGAATAGGAAACAAGATTGGATGGACATTCTCCTCTaGAGGGCTGCTGCCTTGTTC +
Preference number: 4 (lower is better)
Translates to: CRRIQREVSRLKNRKQDWMDILL*RAAALF
Trigger: GAACAAGGCAGCAGCCCTTCAGAGGAGAATGTCCAT...CCAATCTTGTTTCCTATTCTTCAACCTGCTGACTTCCCTCTGGATTCTTCTGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR TCA 90 bp GCATTCTATAATGCTGGCCACATGCAGAAACATTACAAGCAAAACAATGCCAGTAGAAGGAGTGGTCTTTaGAGGTGGGCGTTTCCGGGG +
Preference number: 4 (lower is better)
Translates to: AFYNAGHMQKHYKQNNASRRSGL*RWAFPG
Trigger: CCCCGGAAACGCCCACCTTCAAAGACCACTCCTTCT...ACTGGCATTGTTTTGCTTGTAATGTTTCTGCATGTGGCCAGCATTATAGAATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR TCA 90 bp GAGCATTCTATAATGCTGGCCACATGCAGAAACATTACAAGCAAAACAATGCCAAGAAGGAGTGGTCTTTaGAGGTGGGCGTTTCCGGGG +
Preference number: 4 (lower is better)
Translates to: EHSIMLATCRNITSKTMPRRSGL*RWAFPG
Trigger: CCCCGGAAACGCCCACCTTCAAAGACCACTCCTTCT...TGGCATTGTTTTGCTTGTAATGTTTCTGCATGTGGCCAGCATTATAGAATGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR TCA 90 bp TTTCAACCATTTAACATAAGCTATAGGCTATACCTCCTAACTACAGACTGTACACTGTTGAGTGGGAGGTaGGGGCGCAGTCCCCGTTGG +
Preference number: 4 (lower is better)
Translates to: FQPFNISYRLYLLTTDCTLLSGR*GRSPRW
Trigger: CCAACGGGGACTGCGCCCTCACCTCCCACTCAACAG...TGTACAGTCTGTAGTTAGGAGGTATAGCCTATAGCTTATGTTAAATGGTTGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR TCA 90 bp TGCAGAAGAATCCAGAGGGAAGTCAGCAGGTTGAAGAATAGGAAACAAGATTGGGTTCCTGGAAGATGCTaGGCTGGTGTCATCCATACC +
Preference number: 4 (lower is better)
Translates to: CRRIQREVSRLKNRKQDWVPGRC*AGVIHT
Trigger: GGTATGGATGACACCAGCTCAGCATCTTCCAGGAAC...CCAATCTTGTTTCCTATTCTTCAACCTGCTGACTTCCCTCTGGATTCTTCTGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR TCA 90 bp AAGTGGCAATGTCTTCGGTGTTTTACAAAAGGCGCTAGCTATCTAAGGCATCTGGTTCCTGGAAGATGCTaGGCTGGTGTCATCCATACC +
Preference number: 4 (lower is better)
Translates to: KWQCLRCFTKGASYLRHLVPGRC*AGVIHT
Trigger: GGTATGGATGACACCAGCTCAGCATCTTCCAGGAAC...CAGATGCCTTAGATAGCTAGCGCCTTTTGTAAAACACCGAAGACATTGCCACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000510784.8
ENST00000540914.5
CDS-3UTR TCA 90 bp GATAAAATGGCACAATATCTGGGACTGGTTGCAGAAGAATCCAGAGGGAAGTCATTCCTCCTTCAGGTGTaGCTTTGGCTCTTGGCCTTC +
Preference number: 4 (lower is better)
Translates to: DKMAQYLGLVAEESRGKSFLLQV*LWLLAF
Trigger: GAAGGCCAAGAGCCAAAGTCACACCTGAAGGAGGAA...TGACTTCCCTCTGGATTCTTCTGCAACCAGTCCCAGATATTGTGCCATTTTATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR TCA 90 bp GAACTATTTGGCCAGGGAATCCTACCAGTGAGTGATTTCCCTGGGGGCAGTAACAAGCACTTTCAACTGTaGGACTTAAACTGGAAGACC +
Preference number: 4 (lower is better)
Translates to: ELFGQGILPVSDFPGGSNKHFQL*DLNWKT
Trigger: GGTCTTCCAGTTTAAGTCTCACAGTTGAAAGTGCTT...GTTACTGCCCCCAGGGAAATCACTCACTGGTAGGATTCCCTGGCCAAATAGTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR TCA 90 bp ATGTTTGAACTATTTGGCCAGGGAATCCTACCAGTGAGTGATTTCCCTGGGGGCGCACTTGGTCCAGAATaGCAGCAAAGACAGCTTTTT +
Preference number: 4 (lower is better)
Translates to: MFELFGQGILPVSDFPGGALGPE*QQRQLF
Trigger: AAAAAGCTGTCTTTGCTGTCATTCTGGACCAAGTGC...GCCCCCAGGGAAATCACTCACTGGTAGGATTCCCTGGCCAAATAGTTCAAACAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR TCA 90 bp CTCCACTCCTACTCCATTAGGATTTCTCTGACTTCTAGGTTCCTCCACCTCAAAAATACTGGAAAACAGTaGCGACTTCCGAGGACAGGC +
Preference number: 4 (lower is better)
Translates to: LHSYSIRISLTSRFLHLKNTGKQ*RLPRTG
Trigger: GCCTGTCCTCGGAAGTCGTCACTGTTTTCCAGTATT...TTTGAGGTGGAGGAACCTAGAAGTCAGAGAAATCCTAATGGAGTAGGAGTGGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR TCA 90 bp GTGATTTCCCTGGGGGCAGTAACCACCCCTCAGGATGTCCTTCTTTCTAATCCCCTGAGGCCACATTTCTaGTTTCTTCAGTATCAGATT +
Preference number: 4 (lower is better)
Translates to: VISLGAVTTPQDVLLSNPLRPHF*FLQYQI
Trigger: AATCTGATACTGAAGAAATCAGAAATGTGGCCTCAG...GGGATTAGAAAGAAGGACATCCTGAGGGGTGGTTACTGCCCCCAGGGAAATCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR TCA 90 bp GTGATTTCCCTGGGGGCAGTAACCACCCCTCAGGATGTCCTTCTTTCTAATCCCAGCATCACAGGTTTGTaGATCTACAGCTTTTGGTTT +
Preference number: 4 (lower is better)
Translates to: VISLGAVTTPQDVLLSNPSITGL*IYSFWF
Trigger: AAACCAAAAGCTGTAGATTCACAAACCTGTGATGCT...GGGATTAGAAAGAAGGACATCCTGAGGGGTGGTTACTGCCCCCAGGGAAATCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR TCA 90 bp GATATGTACACGATAAGTTCACAGTTGAAAGAACCATTTGCCAGAAGCCTGGCAAGGGAATCCTACCAGTaGGTGATTTCCCTGGGGGCA +
Preference number: 4 (lower is better)
Translates to: DMYTISSQLKEPFARSLARESYQ*VISLGA
Trigger: TGCCCCCAGGGAAATCACTCACTGGTAGGATTCCCT...TGCCAGGCTTCTGGCAAATGGTTCTTTCAACTGTGAACTTATCGTGTACATATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR TCA 90 bp TGGATAAAATGGCACAATATCTGGGACTGGTTGCAGAAGAATCCAGAGGGAAGTGCAAGGAAGGCAGTTTaGGCGAGTTACTTCCCCAGA +
Preference number: 4 (lower is better)
Translates to: WIKWHNIWDWLQKNPEGSARKAV*ASYFPR
Trigger: TCTGGGGAAGTAACTCGCTCAAACTGCCTTCCTTGC...ACTTCCCTCTGGATTCTTCTGCAACCAGTCCCAGATATTGTGCCATTTTATCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378023.8
ENST00000540914.5
CDS-3UTR TCA 90 bp AAACCATGTCAACCACAAAGCCTTGGGAAACAGAACTGCTATATCCCTCTGCCTAGATTGGCCATGAGTTaGTCACTGAGGAGGTTGAGG +
Preference number: 4 (lower is better)
Translates to: KPCQPQSLGKQNCYIPLPRLAMS*SLRRLR
Trigger: CCTCAACCTCCTCAGTGATCAACTCATGGCCAATCT...AGGCAGAGGGATATAGCAGTTCTGTTTCCCAAGGCTTTGTGGTTGACATGGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510784.8
ENST00000540914.5
CDS-3UTR TCA 90 bp CATGAGTTGATCACTGAGGAGGTTGAGGGATGGGCACACTGGGATCCATTAGAGGCACCATTTAGTTTCTaGTCGTCAAGGTGTTTAGCA +
Preference number: 4 (lower is better)
Translates to: HELITEEVEGWAHWDPLEAPFSF*SSRCLA
Trigger: TGCTAAACACCTTGACGATCAGAAACTAAATGGTGC...CTCTAATGGATCCCAGTGTGCCCATCCCTCAACCTCCTCAGTGATCAACTCATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510784.8
ENST00000540914.5
CDS-3UTR TCA 90 bp ATTCAAGAGGATGCTGGGGTGGGTCGAATGGGACAAATTCTGCAAGTTAGAAGCCTCCATCCAGTTAGGTaGCACTCCTTGCTGATTTCT +
Preference number: 4 (lower is better)
Translates to: IQEDAGVGRMGQILQVRSLHPVR*HSLLIS
Trigger: AGAAATCAGCAAGGAGTGTCACCTAACTGGATGGAG...GCTTCTAACTTGCAGAATTTGTCCCATTCGACCCACCCCAGCATCCTCTTGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR TCA 90 bp ATGGGAGCAATCCCATTCTCTGGCCTGGAGCATTCTATAATGCTGGCCACATGCTTTTCCTCTGAGGACTaGGGAAAGAATGAATGCCTT +
Preference number: 4 (lower is better)
Translates to: MGAIPFSGLEHSIMLATCFSSED*GKNECL
Trigger: AAGGCATTCATTCTTTCCTCAGTCCTCAGAGGAAAA...GCATGTGGCCAGCATTATAGAATGCTCCAGGCCAGAGAATGGGATTGCTCCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000645100.1
ENST00000647136.1
CDS-3UTR GCA 90 bp ACAATATCTGGGACTGGTTGCAGAAGAATCCAGAGGGAAGTCAGCAGGTTGAAGGATGTTGCGAAGGCTTaGTTCATTTTGCTGGCACCA +
Preference number: 4 (lower is better)
Translates to: TISGTGCRRIQREVSRLKDVAKA*FILLAP
Trigger: TGGTGCCAGCAAAATGAAGCAAGCCTTCGCAACATC...CTTCAACCTGCTGACTTCCCTCTGGATTCTTCTGCAACCAGTCCCAGATATTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR GCA 90 bp GGGACTGGTTGCAGAAGAATCCAGAGGGAAGTCAGCAGGTTGAAGAATAGGAAATTCAGTTTCCACCGCTaGCGGCCATACTTCATGAAA +
Preference number: 4 (lower is better)
Translates to: GTGCRRIQREVSRLKNRKFSFHR*RPYFMK
Trigger: TTTCATGAAGTATGGCCGGCAGCGGTGGAAACTGAA...TTTCCTATTCTTCAACCTGCTGACTTCCCTCTGGATTCTTCTGCAACCAGTCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR GCA 90 bp CATGAGTTGATCACTGAGGAGGTTGAGGGATGGGCACACTGGGATCCATTAGAGTCTCCATCCCAGCTCTaGTTGCCATTTACTTCTATT +
Preference number: 4 (lower is better)
Translates to: HELITEEVEGWAHWDPLESPSQL*LPFTSI
Trigger: AATAGAAGTAAATGGCAAGCAGAGCTGGGATGGAGA...CTCTAATGGATCCCAGTGTGCCCATCCCTCAACCTCCTCAGTGATCAACTCATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR GCA 90 bp ATTACACTCACATATATTGTTTTGATACCTTGGCATACCCCACCTTGTACACTCTCTCCTCTGAAGGGCTaGTGCCTTGTTCCCAGCGCC +
Preference number: 4 (lower is better)
Translates to: ITLTYIVLIPWHTPPCTLSPLKG*CLVPSA
Trigger: GGCGCTGGGAACAAGGCAGCAGCCCTTCAGAGGAGA...GAGTGTACAAGGTGGGGTATGCCAAGGTATCAAAACAATATATGTGAGTGTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR GCA 90 bp AGGGCCTTGCAGGGATCTGTCTCTGACACTCAAGATGGCACAAAAGCACATGGGTTGCAGAAGTGCTTCTaGAACATCATTCTCAAGGAA +
Preference number: 4 (lower is better)
Translates to: RALQGSVSDTQDGTKAHGLQKCF*NIILKE
Trigger: TTCCTTGAGAATGATGTTGCAGAAGCACTTCTGCAA...CCCATGTGCTTTTGTGCCATCTTGAGTGTCAGAGACAGATCCCTGCAAGGCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR GCA 90 bp GTGATTTCCCTGGGGGCAGTAACCACCCCTCAGGATGTCCTTCTTTCTAATCCCTTGCAGAAGTGCTTCTaGAACATCATTCTCAAGGAA +
Preference number: 4 (lower is better)
Translates to: VISLGAVTTPQDVLLSNPLQKCF*NIILKE
Trigger: TTCCTTGAGAATGATGTTGCAGAAGCACTTCTGCAA...GGGATTAGAAAGAAGGACATCCTGAGGGGTGGTTACTGCCCCCAGGGAAATCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR GCA 90 bp AAAATGGCACAATATCTGGGACTGGTTGCAGAAGAATCCAGAGGGAAGTCAGCAGCCTCCTCAGACTCTTaGAGAAGTGCTTCTGCAACA +
Preference number: 4 (lower is better)
Translates to: KMAQYLGLVAEESRGKSAASSDS*RSASAT
Trigger: TGTTGCAGAAGCACTTCTGCAAGAGTCTGAGGAGGC...TGCTGACTTCCCTCTGGATTCTTCTGCAACCAGTCCCAGATATTGTGCCATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR GCA 90 bp GGGACTGGTTGCAGAAGAATCCAGAGGGAAGTCAGCAGGTTGAAGAATAGGAAAAGCCTCTTGACCAGCTaGTTTGTGATGTTTCCTTCC +
Preference number: 4 (lower is better)
Translates to: GTGCRRIQREVSRLKNRKSLLTS*FVMFPS
Trigger: GGAAGGAAACATCACAAAGCAGCTGGTCAAGAGGCT...TTTCCTATTCTTCAACCTGCTGACTTCCCTCTGGATTCTTCTGCAACCAGTCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR GCA 90 bp GATAAGTTCACAGTTGAAAGAACCATTTGCCAGAAGCCTGGCAAACAATTTGCATGGGAGAGGACTTCCTaGCACACTGGTCCCAACTCC +
Preference number: 4 (lower is better)
Translates to: DKFTVERTICQKPGKQFAWERTS*HTGPNS
Trigger: GGAGTTGGGACCAGTGTGGCAGGAAGTCCTCTCCCA...TGCAAATTGTTTGCCAGGCTTCTGGCAAATGGTTCTTTCAACTGTGAACTTATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR GCA 90 bp GAACTATTTGGCCAGGGAATCCTACCAGTGAGTGATTTCCCTGGGGGCAGTAACTCCATCACTTGGATCTaGCTAGAAAGCTTCTCTAAG +
Preference number: 4 (lower is better)
Translates to: ELFGQGILPVSDFPGGSNSITWI*LESFSK
Trigger: CTTAGAGAAGCTTTCTAGGCAGATCCAAGTGATGGA...GTTACTGCCCCCAGGGAAATCACTCACTGGTAGGATTCCCTGGCCAAATAGTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR GCA 90 bp GATATGTACACGATAAGTTCACAGTTGAAAGAACCATTTGCCAGAAGCCTGGCAAAGCTGGCCTCCAGCTaGTTCATCACTCTGTCCGCT +
Preference number: 4 (lower is better)
Translates to: DMYTISSQLKEPFARSLAKLASS*FITLSA
Trigger: AGCGGACAGAGTGATGAAGCAGCTGGAGGCCAGCTT...TGCCAGGCTTCTGGCAAATGGTTCTTTCAACTGTGAACTTATCGTGTACATATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR GCA 90 bp GTGATTTCCCTGGGGGCAGTAACCACCCCTCAGGATGTCCTTCTTTCTAATCCCACGACCGAGAAAAACTaGAAGGCATATGATGTTTGT +
Preference number: 4 (lower is better)
Translates to: VISLGAVTTPQDVLLSNPTTEKN*KAYDVC
Trigger: ACAAACATCATATGCCTTGCAGTTTTTCTCGGTCGT...GGGATTAGAAAGAAGGACATCCTGAGGGGTGGTTACTGCCCCCAGGGAAATCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR GCA 90 bp ATATTCAAGAGGATGCTGGGGTGGGTCGAATGGGACAAATTCTGCAAGTTAGAACTTCCTCTGGAGCTCTaGCTCAAAGGGAACAAGTCC +
Preference number: 4 (lower is better)
Translates to: IFKRMLGWVEWDKFCKLELPLEL*LKGNKS
Trigger: GGACTTGTTCCCTTTGAGGCAGAGCTCCAGAGGAAG...TTCTAACTTGCAGAATTTGTCCCATTCGACCCACCCCAGCATCCTCTTGAATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR GCA 90 bp ATGGGAGCAATCCCATTCTCTGGCCTGGAGCATTCTATAATGCTGGCCACATGCATGAGCCACCGCACCTaGTCACAGCATATAATTTTT +
Preference number: 4 (lower is better)
Translates to: MGAIPFSGLEHSIMLATCMSHRT*SQHIIF
Trigger: AAAAATTATATGCTGTGAGCAGGTGCGGTGGCTCAT...GCATGTGGCCAGCATTATAGAATGCTCCAGGCCAGAGAATGGGATTGCTCCCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000645100.1
ENST00000647136.1
CDS-3UTR GCA 90 bp GATAAAATGGCACAATATCTGGGACTGGTTGCAGAAGAATCCAGAGGGAAGTCATCCTTCAGTTCTGCTTaGAAAAAGTGCGCGTGCCCC +
Preference number: 4 (lower is better)
Translates to: DKMAQYLGLVAEESRGKSSFSSA*KKCACP
Trigger: GGGGCACGCGCACTTTTTGCAAGCAGAACTGAAGGA...TGACTTCCCTCTGGATTCTTCTGCAACCAGTCCCAGATATTGTGCCATTTTATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000643623.1
CDS-3UTR CCA 90 bp GCAATCCCATTCTCTGGCCTGGAGCATTCTATAATGCTGGCCACATGCAGAAACAAACCCGCAAAGGACTaGCTTCTAATGATCCCATTG +
Preference number: 4 (lower is better)
Translates to: AIPFSGLEHSIMLATCRNKPAKD*LLMIPL
Trigger: CAATGGGATCATTAGAAGCCAGTCCTTTGCGGGTTT...GTTTCTGCATGTGGCCAGCATTATAGAATGCTCCAGGCCAGAGAATGGGATTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR CCA 90 bp ATGTTTGAACTATTTGGCCAGGGAATCCTACCAGTGAGTGATTTCCCTGGGGGCAAACCCGCAAAGGACTaGCTTCTAATGATCCCATTG +
Preference number: 4 (lower is better)
Translates to: MFELFGQGILPVSDFPGGKPAKD*LLMIPL
Trigger: CAATGGGATCATTAGAAGCCAGTCCTTTGCGGGTTT...GCCCCCAGGGAAATCACTCACTGGTAGGATTCCCTGGCCAAATAGTTCAAACAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CCA 90 bp ATAAAATGGCACAATATCTGGGACTGGTTGCAGAAGAATCCAGAGGGAAGTCAGCTTGCTTCATTTTGCTaGCACCATCCTGGAGGCGTC +
Preference number: 4 (lower is better)
Translates to: IKWHNIWDWLQKNPEGSQLASFC*HHPGGV
Trigger: GACGCCTCCAGGATGGTGCCAGCAAAATGAAGCAAG...CTGACTTCCCTCTGGATTCTTCTGCAACCAGTCCCAGATATTGTGCCATTTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR CCA 90 bp TGCAGAAGAATCCAGAGGGAAGTCAGCAGGTTGAAGAATAGGAAACAAGATTGGCTTGCTTCATTTTGCTaGCACCATCCTGGAGGCGTC +
Preference number: 4 (lower is better)
Translates to: CRRIQREVSRLKNRKQDWLASFC*HHPGGV
Trigger: GACGCCTCCAGGATGGTGCCAGCAAAATGAAGCAAG...CCAATCTTGTTTCCTATTCTTCAACCTGCTGACTTCCCTCTGGATTCTTCTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR CCA 90 bp TGGATAAAATGGCACAATATCTGGGACTGGTTGCAGAAGAATCCAGAGGGAAGTCTTGCTTCATTTTGCTaGCACCATCCTGGAGGCGTC +
Preference number: 4 (lower is better)
Translates to: WIKWHNIWDWLQKNPEGSLASFC*HHPGGV
Trigger: GACGCCTCCAGGATGGTGCCAGCAAAATGAAGCAAG...ACTTCCCTCTGGATTCTTCTGCAACCAGTCCCAGATATTGTGCCATTTTATCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR CCA 90 bp GAACTATTTGGCCAGGGAATCCTACCAGTGAGTGATTTCCCTGGGGGCAGTAACCTAGCTCCACTTCAATaGTGCACATATTCTCTGTGT +
Preference number: 4 (lower is better)
Translates to: ELFGQGILPVSDFPGGSNLAPLQ*CTYSLC
Trigger: ACACAGAGAATATGTGCACCATTGAAGTGGAGCTAG...GTTACTGCCCCCAGGGAAATCACTCACTGGTAGGATTCCCTGGCCAAATAGTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CCA 90 bp AAAATGGCACAATATCTGGGACTGGTTGCAGAAGAATCCAGAGGGAAGTCAGCATACCCTGGCTGTACATaGACATTCTCCTCTGAAGGG +
Preference number: 4 (lower is better)
Translates to: KMAQYLGLVAEESRGKSAYPGCT*TFSSEG
Trigger: CCCTTCAGAGGAGAATGTCCATGTACAGCCAGGGTA...TGCTGACTTCCCTCTGGATTCTTCTGCAACCAGTCCCAGATATTGTGCCATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR CCA 90 bp TCTGGCCTGGAGCATTCTATAATGCTGGCCACATGCAGAAACATTACAAGCAAAGTTTCCGGGGTACCCTaGCTGTACATGGACATTCTC +
Preference number: 4 (lower is better)
Translates to: SGLEHSIMLATCRNITSKVSGVP*LYMDIL
Trigger: GAGAATGTCCATGTACAGCCAGGGTACCCCGGAAAC...TTTGCTTGTAATGTTTCTGCATGTGGCCAGCATTATAGAATGCTCCAGGCCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR CCA 90 bp AAGTGGCAATGTCTTCGGTGTTTTACAAAAGGCGCTAGCTATCTAAGGCATCTGGTTTCCGGGGTACCCTaGCTGTACATGGACATTCTC +
Preference number: 4 (lower is better)
Translates to: KWQCLRCFTKGASYLRHLVSGVP*LYMDIL
Trigger: GAGAATGTCCATGTACAGCCAGGGTACCCCGGAAAC...CAGATGCCTTAGATAGCTAGCGCCTTTTGTAAAACACCGAAGACATTGCCACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000510784.8
ENST00000540914.5
CDS-3UTR CCA 90 bp GCATTCTATAATGCTGGCCACATGCAGAAACATTACAAGCAAAACAATGCCAGTAGACAGACAGCCGCCTaGGCTTGTCTGGGGAAGGAT +
Preference number: 4 (lower is better)
Translates to: AFYNAGHMQKHYKQNNASRQTAA*ACLGKD
Trigger: ATCCTTCCCCAGACAAGCCCAGGCGGCTGTCTGTCT...ACTGGCATTGTTTTGCTTGTAATGTTTCTGCATGTGGCCAGCATTATAGAATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644411.1
CDS-3UTR CCA 90 bp ATATTCAAGAGGATGCTGGGGTGGGTCGAATGGGACAAATTCTGCAAGTTAGAAGGCTGCGGTGCAGCTTaGCAAAGAAAGTGTCTTGCA +
Preference number: 4 (lower is better)
Translates to: IFKRMLGWVEWDKFCKLEGCGAA*QRKCLA
Trigger: TGCAAGACACTTTCTTTGCCAAGCTGCACCGCAGCC...TTCTAACTTGCAGAATTTGTCCCATTCGACCCACCCCAGCATCCTCTTGAATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644411.1
CDS-3UTR CCA 90 bp GTACAACCATGGATAAAATGGCACAATATCTGGGACTGGTTGCAGAAGAATCCAGAAGCTGAGCGACAGTaGCATTTTCTCCTCGGCTGC +
Preference number: 4 (lower is better)
Translates to: VQPWIKWHNIWDWLQKNPEAERQ*HFLLGC
Trigger: GCAGCCGAGGAGAAAATGCCACTGTCGCTCAGCTTC...TGGATTCTTCTGCAACCAGTCCCAGATATTGTGCCATTTTATCCATGGTTGTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
CDS-3UTR CCA 90 bp GATATGTACACGATAAGTTCACAGTTGAAAGAACCATTTGCCAGAAGCCTGGCAGAAGCTGAGCGACAGTaGCATTTTCTCCTCGGCTGC +
Preference number: 4 (lower is better)
Translates to: DMYTISSQLKEPFARSLAEAERQ*HFLLGC
Trigger: GCAGCCGAGGAGAAAATGCCACTGTCGCTCAGCTTC...TGCCAGGCTTCTGGCAAATGGTTCTTTCAACTGTGAACTTATCGTGTACATATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CCA 90 bp TTTCAACCATTTAACATAAGCTATAGGCTATACCTCCTAACTACAGACTGTACAGGGGAGCCTGTTGAGTaGGAGGTGAGGGCGCAGTCC +
Preference number: 4 (lower is better)
Translates to: FQPFNISYRLYLLTTDCTGEPVE*EVRAQS
Trigger: GGACTGCGCCCTCACCTCCCACTCAACAGGCTCCCC...TGTACAGTCTGTAGTTAGGAGGTATAGCCTATAGCTTATGTTAAATGGTTGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CCA 90 bp ACAATATCTGGGACTGGTTGCAGAAGAATCCAGAGGGAAGTCAGCAGGTTGAAGCTGGATTTGTTGAGTTaGAAGGGGAGCCTGTTGAGT +
Preference number: 4 (lower is better)
Translates to: TISGTGCRRIQREVSRLKLDLLS*KGSLLS
Trigger: ACTCAACAGGCTCCCCTTCCAACTCAACAAATCCAG...CTTCAACCTGCTGACTTCCCTCTGGATTCTTCTGCAACCAGTCCCAGATATTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR CCA 90 bp GGGACTGGTTGCAGAAGAATCCAGAGGGAAGTCAGCAGGTTGAAGAATAGGAAATGGAAGATGCTGAGCTaGTGTCATCCATACCCTCAT +
Preference number: 4 (lower is better)
Translates to: GTGCRRIQREVSRLKNRKWKMLS*CHPYPH
Trigger: ATGAGGGTATGGATGACACCAGCTCAGCATCTTCCA...TTTCCTATTCTTCAACCTGCTGACTTCCCTCTGGATTCTTCTGCAACCAGTCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR CCA 90 bp GATATGTACACGATAAGTTCACAGTTGAAAGAACCATTTGCCAGAAGCCTGGCACTCCCAGGGAGTTCCTaGAAGATGCTGAGCTGGTGT +
Preference number: 4 (lower is better)
Translates to: DMYTISSQLKEPFARSLALPGSS*KMLSWC
Trigger: ACACCAGCTCAGCATCTTCCAGGAACTCCCTGGGAG...TGCCAGGCTTCTGGCAAATGGTTCTTTCAACTGTGAACTTATCGTGTACATATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CCA 90 bp ATAAAATGGCACAATATCTGGGACTGGTTGCAGAAGAATCCAGAGGGAAGTCAGTTTTCTGGGCTCCTCTaGGTCTTCCTCCTTCAGGTG +
Preference number: 4 (lower is better)
Translates to: IKWHNIWDWLQKNPEGSQFSGLL*VFLLQV
Trigger: CACCTGAAGGAGGAAGACCCAGAGGAGCCCAGAAAA...CTGACTTCCCTCTGGATTCTTCTGCAACCAGTCCCAGATATTGTGCCATTTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR CCA 90 bp TGGATAAAATGGCACAATATCTGGGACTGGTTGCAGAAGAATCCAGAGGGAAGTTTTTCTGGGCTCCTCTaGGTCTTCCTCCTTCAGGTG +
Preference number: 4 (lower is better)
Translates to: WIKWHNIWDWLQKNPEGSFSGLL*VFLLQV
Trigger: CACCTGAAGGAGGAAGACCCAGAGGAGCCCAGAAAA...ACTTCCCTCTGGATTCTTCTGCAACCAGTCCCAGATATTGTGCCATTTTATCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR CCA 90 bp GATAAGTTCACAGTTGAAAGAACCATTTGCCAGAAGCCTGGCAAACAATTTGCACCGAGGCAGGTTTTCTaGGCTCCTCTGGGTCTTCCT +
Preference number: 4 (lower is better)
Translates to: DKFTVERTICQKPGKQFAPRQVF*APLGLP
Trigger: AGGAAGACCCAGAGGAGCCCAGAAAACCTGCCTCGG...TGCAAATTGTTTGCCAGGCTTCTGGCAAATGGTTCTTTCAACTGTGAACTTATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CCA 90 bp GCATTCTATAATGCTGGCCACATGCAGAAACATTACAAGCAAAACAATGCCAGTCCGAGGCAGGTTTTCTaGGCTCCTCTGGGTCTTCCT +
Preference number: 4 (lower is better)
Translates to: AFYNAGHMQKHYKQNNASPRQVF*APLGLP
Trigger: AGGAAGACCCAGAGGAGCCCAGAAAACCTGCCTCGG...ACTGGCATTGTTTTGCTTGTAATGTTTCTGCATGTGGCCAGCATTATAGAATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR CCA 90 bp ATTACACTCACATATATTGTTTTGATACCTTGGCATACCCCACCTTGTACACTCGCGGCAAGCCTCAGATaGGGCCGAGGCAGGTTTTCT +
Preference number: 4 (lower is better)
Translates to: ITLTYIVLIPWHTPPCTLAASLR*GRGRFS
Trigger: AGAAAACCTGCCTCGGCCCCATCTGAGGCTTGCCGC...GAGTGTACAAGGTGGGGTATGCCAAGGTATCAAAACAATATATGTGAGTGTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CCA 90 bp GATATGTACACGATAAGTTCACAGTTGAAAGAACCATTTGCCAGAAGCCTGGCACCTGTCTGTGGCCATTaGCACCTCTGCAGATGTGAG +
Preference number: 4 (lower is better)
Translates to: DMYTISSQLKEPFARSLAPVCGH*HLCRCE
Trigger: CTCACATCTGCAGAGGTGCCAATGGCCACAGACAGG...TGCCAGGCTTCTGGCAAATGGTTCTTTCAACTGTGAACTTATCGTGTACATATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CCA 90 bp GATATGTACACGATAAGTTCACAGTTGAAAGAACCATTTGCCAGAAGCCTGGCAATGCCCCCTGGCTTCTaGGTGAACCGACCTGTAACT +
Preference number: 4 (lower is better)
Translates to: DMYTISSQLKEPFARSLAMPPGF*VNRPVT
Trigger: AGTTACAGGTCGGTTCACCCAGAAGCCAGGGGGCAT...TGCCAGGCTTCTGGCAAATGGTTCTTTCAACTGTGAACTTATCGTGTACATATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CCA 90 bp ATTACACTCACATATATTGTTTTGATACCTTGGCATACCCCACCTTGTACACTCGGGCCAGGAGGTTGCTaGGAGCAAGGTCACTCATGG +
Preference number: 4 (lower is better)
Translates to: ITLTYIVLIPWHTPPCTLGPGGC*EQGHSW
Trigger: CCATGAGTGACCTTGCTCCCAGCAACCTCCTGGCCC...GAGTGTACAAGGTGGGGTATGCCAAGGTATCAAAACAATATATGTGAGTGTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CCA 90 bp ATGTTTGAACTATTTGGCCAGGGAATCCTACCAGTGAGTGATTTCCCTGGGGGCGCTGCTTTCTGGAGCTaGAGGTTTGTCTTTGTTAGT +
Preference number: 4 (lower is better)
Translates to: MFELFGQGILPVSDFPGGAAFWS*RFVFVS
Trigger: ACTAACAAAGACAAACCTCCAGCTCCAGAAAGCAGC...GCCCCCAGGGAAATCACTCACTGGTAGGATTCCCTGGCCAAATAGTTCAAACAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CCA 90 bp GTCTTGAACTCTTGGGCTCCAGCAATCCTGGGCTTCCCAAAGTGTTGGGATTACTTTGAAAAGAAGGAGTaGTCTTTGAAGGTGGGCGTT +
Preference number: 4 (lower is better)
Translates to: VLNSWAPAILGFPKCWDYFEKKE*SLKVGV
Trigger: AACGCCCACCTTCAAAGACCACTCCTTCTTTTCAAA...GTAATCCCAACACTTTGGGAAGCCCAGGATTGCTGGAGCCCAAGAGTTCAAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000645100.1
ENST00000647136.1
CDS-3UTR CCA 90 bp AATGGCACAATATCTGGGACTGGTTGCAGAAGAATCCAGAGGGAAGTCAGCAGGCACAATATCTGGGACTaGTTGCAGAAGAATCCAGAG +
Preference number: 4 (lower is better)
Translates to: NGTISGTGCRRIQREVSRHNIWD*LQKNPE
Trigger: CTCTGGATTCTTCTGCAACCAGTCCCAGATATTGTG...CCTGCTGACTTCCCTCTGGATTCTTCTGCAACCAGTCCCAGATATTGTGCCATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR CCA 90 bp ATCATGGGAGCAATCCCATTCTCTGGCCTGGAGCATTCTATAATGCTGGCCACATGGCACAAAAGCACATaGGAAAACGTCTTTCGGTCT +
Preference number: 4 (lower is better)
Translates to: IMGAIPFSGLEHSIMLATWHKST*ENVFRS
Trigger: AGACCGAAAGACGTTTTCCCATGTGCTTTTGTGCCA...TGTGGCCAGCATTATAGAATGCTCCAGGCCAGAGAATGGGATTGCTCCCATGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR CCA 90 bp ATTCAAGAGGATGCTGGGGTGGGTCGAATGGGACAAATTCTGCAAGTTAGAAGCCTGGGGTGGGTCGAATaGGACAAATTCTGCAAGTTA +
Preference number: 4 (lower is better)
Translates to: IQEDAGVGRMGQILQVRSLGWVE*DKFCKL
Trigger: TAACTTGCAGAATTTGTCCCATTCGACCCACCCCAG...GCTTCTAACTTGCAGAATTTGTCCCATTCGACCCACCCCAGCATCCTCTTGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR CCA 90 bp GAGCATTCTATAATGCTGGCCACATGCAGAAACATTACAAGCAAAACAATGCCACAGCCCTGCTTCCTCTaGAGCTCTGCCTCAAAGGGA +
Preference number: 4 (lower is better)
Translates to: EHSIMLATCRNITSKTMPQPCFL*SSASKG
Trigger: TCCCTTTGAGGCAGAGCTCCAGAGGAAGCAGGGCTG...TGGCATTGTTTTGCTTGTAATGTTTCTGCATGTGGCCAGCATTATAGAATGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR CCA 90 bp GAGCATTCTATAATGCTGGCCACATGCAGAAACATTACAAGCAAAACAATGCCAGGGCTCCAGCAATCCTaGGCTTCCCAAAGTGTTGGG +
Preference number: 4 (lower is better)
Translates to: EHSIMLATCRNITSKTMPGLQQS*ASQSVG
Trigger: CCCAACACTTTGGGAAGCCCAGGATTGCTGGAGCCC...TGGCATTGTTTTGCTTGTAATGTTTCTGCATGTGGCCAGCATTATAGAATGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000645100.1
ENST00000647136.1
CDS-3UTR CCA 90 bp GAGCATTCTATAATGCTGGCCACATGCAGAAACATTACAAGCAAAACAATGCCACCGGTCTTGAACTCTTaGGCTCCAGCAATCCTGGGC +
Preference number: 4 (lower is better)
Translates to: EHSIMLATCRNITSKTMPPVLNS*APAILG
Trigger: GCCCAGGATTGCTGGAGCCCAAGAGTTCAAGACCGG...TGGCATTGTTTTGCTTGTAATGTTTCTGCATGTGGCCAGCATTATAGAATGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000645100.1
ENST00000647136.1
CDS-3UTR TCA 90 bp GGGACTGGTTGCAGAAGAATCCAGAGGGAAGTCAGCAGGTTGAAGAATAGGAAACGGAGGAATTTTCAATaGAGGAGTTACACCTGGATC +
Preference number: 4 (lower is better)
Translates to: GTGCRRIQREVSRLKNRKRRNFQ*RSYTWI
Trigger: GATCCAGGTGTAACTCCTTCATTGAAAATTCCTCCG...TTTCCTATTCTTCAACCTGCTGACTTCCCTCTGGATTCTTCTGCAACCAGTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR TCA 90 bp AAATGGCACAATATCTGGGACTGGTTGCAGAAGAATCCAGAGGGAAGTCAGCAGCGGAGGAATTTTCAATaGAGGAGTTACACCTGGATC +
Preference number: 4 (lower is better)
Translates to: KWHNIWDWLQKNPEGSQQRRNFQ*RSYTWI
Trigger: GATCCAGGTGTAACTCCTTCATTGAAAATTCCTCCG...CTGCTGACTTCCCTCTGGATTCTTCTGCAACCAGTCCCAGATATTGTGCCATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR TCA 90 bp GATAAAATGGCACAATATCTGGGACTGGTTGCAGAAGAATCCAGAGGGAAGTCATGGCCTGAGGCTTCTTaGGAGCGGAGGAATTTTCAA +
Preference number: 4 (lower is better)
Translates to: DKMAQYLGLVAEESRGKSWPEAS*ERRNFQ
Trigger: TTGAAAATTCCTCCGCTCTCAAGAAGCCTCAGGCCA...TGACTTCCCTCTGGATTCTTCTGCAACCAGTCCCAGATATTGTGCCATTTTATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR TCA 90 bp TCTGGCCTGGAGCATTCTATAATGCTGGCCACATGCAGAAACATTACAAGCAAATGGCCTGAGGCTTCTTaGGAGCGGAGGAATTTTCAA +
Preference number: 4 (lower is better)
Translates to: SGLEHSIMLATCRNITSKWPEAS*ERRNFQ
Trigger: TTGAAAATTCCTCCGCTCTCAAGAAGCCTCAGGCCA...TTTGCTTGTAATGTTTCTGCATGTGGCCAGCATTATAGAATGCTCCAGGCCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR TCA 90 bp TGGATAAAATGGCACAATATCTGGGACTGGTTGCAGAAGAATCCAGAGGGAAGTTCCAGCTCCGTCTGGTaGACCTCCAGATATTCATCA +
Preference number: 4 (lower is better)
Translates to: WIKWHNIWDWLQKNPEGSSSSVW*TSRYSS
Trigger: TGATGAATATCTGGAGGTTCACCAGACGGAGCTGGA...ACTTCCCTCTGGATTCTTCTGCAACCAGTCCCAGATATTGTGCCATTTTATCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR TCA 90 bp ATAAAATGGCACAATATCTGGGACTGGTTGCAGAAGAATCCAGAGGGAAGTCAGTCCAGCTCCGTCTGGTaGACCTCCAGATATTCATCA +
Preference number: 4 (lower is better)
Translates to: IKWHNIWDWLQKNPEGSQSSSVW*TSRYSS
Trigger: TGATGAATATCTGGAGGTTCACCAGACGGAGCTGGA...CTGACTTCCCTCTGGATTCTTCTGCAACCAGTCCCAGATATTGTGCCATTTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR TCA 90 bp GAACTATTTGGCCAGGGAATCCTACCAGTGAGTGATTTCCCTGGGGGCAGTAACTTCATATCTTTTAACTaGGCTGTCAACTTGTCCAGC +
Preference number: 4 (lower is better)
Translates to: ELFGQGILPVSDFPGGSNFISFN*AVNLSS
Trigger: GCTGGACAAGTTGACAGCTCAGTTAAAAGATATGAA...GTTACTGCCCCCAGGGAAATCACTCACTGGTAGGATTCCCTGGCCAAATAGTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR TCA 90 bp ATGGGAGCAATCCCATTCTCTGGCCTGGAGCATTCTATAATGCTGGCCACATGCTTCATATCTTTTAACTaGGCTGTCAACTTGTCCAGC +
Preference number: 4 (lower is better)
Translates to: MGAIPFSGLEHSIMLATCFISFN*AVNLSS
Trigger: GCTGGACAAGTTGACAGCTCAGTTAAAAGATATGAA...GCATGTGGCCAGCATTATAGAATGCTCCAGGCCAGAGAATGGGATTGCTCCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR TCA 90 bp AATGGCACAATATCTGGGACTGGTTGCAGAAGAATCCAGAGGGAAGTCAGCAGGTCTACCTTACTTATATaGAACTCCAGGCGTCTCATG +
Preference number: 4 (lower is better)
Translates to: NGTISGTGCRRIQREVSRSTLLI*NSRRLM
Trigger: CATGAGACGCCTGGAGTTTCATATAAGTAAGGTAGA...CCTGCTGACTTCCCTCTGGATTCTTCTGCAACCAGTCCCAGATATTGTGCCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR TCA 90 bp CTCCACTCCTACTCCATTAGGATTTCTCTGACTTCTAGGTTCCTCCACCTCAAACCAGACCTTTCATCTTaGTGGAGAATTCTCCCAGCA +
Preference number: 4 (lower is better)
Translates to: LHSYSIRISLTSRFLHLKPDLSS*WRILPA
Trigger: TGCTGGGAGAATTCTCCATCAAGATGAAAGGTCTGG...TTTGAGGTGGAGGAACCTAGAAGTCAGAGAAATCCTAATGGAGTAGGAGTGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR TCA 90 bp AAACCATGTCAACCACAAAGCCTTGGGAAACAGAACTGCTATATCCCTCTGCCTCCAGACCTTTCATCTTaGTGGAGAATTCTCCCAGCA +
Preference number: 4 (lower is better)
Translates to: KPCQPQSLGKQNCYIPLPPDLSS*WRILPA
Trigger: TGCTGGGAGAATTCTCCATCAAGATGAAAGGTCTGG...AGGCAGAGGGATATAGCAGTTCTGTTTCCCAAGGCTTTGTGGTTGACATGGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510784.8
ENST00000540914.5
CDS-3UTR TCA 90 bp CCTGGCATCATGGGAGCAATCCCATTCTCTGGCCTGGAGCATTCTATAATGCTGATGAAAATTTCATATTaGTCTCCAGGACAGAGGCGT +
Preference number: 4 (lower is better)
Translates to: PGIMGAIPFSGLEHSIMLMKISY*SPGQRR
Trigger: ACGCCTCTGTCCTGGAGATCAATATGAAATTTTCAT...CAGCATTATAGAATGCTCCAGGCCAGAGAATGGGATTGCTCCCATGATGCCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR TCA 90 bp GATATGTACACGATAAGTTCACAGTTGAAAGAACCATTTGCCAGAAGCCTGGCACTACCTACCAGGATGTaGGTTGCTAGCCCTTTGAGC +
Preference number: 4 (lower is better)
Translates to: DMYTISSQLKEPFARSLALPTRM*VASPLS
Trigger: GCTCAAAGGGCTAGCAACTCACATCCTGGTAGGTAG...TGCCAGGCTTCTGGCAAATGGTTCTTTCAACTGTGAACTTATCGTGTACATATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR TCA 90 bp ATTACACTCACATATATTGTTTTGATACCTTGGCATACCCCACCTTGTACACTCAGAAGGAGTGGTCTTTaGAGGTGGGCGTTTCCGGGG +
Preference number: 4 (lower is better)
Translates to: ITLTYIVLIPWHTPPCTLRRSGL*RWAFPG
Trigger: CCCCGGAAACGCCCACCTTCAAAGACCACTCCTTCT...GAGTGTACAAGGTGGGGTATGCCAAGGTATCAAAACAATATATGTGAGTGTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR TCA 90 bp GGGACTGGTTGCAGAAGAATCCAGAGGGAAGTCAGCAGGTTGAAGAATAGGAAAAATTTCTGGATTTGTTaGGTTGGAAGGGGAGCCTGT +
Preference number: 4 (lower is better)
Translates to: GTGCRRIQREVSRLKNRKNFWIC*VGRGAC
Trigger: ACAGGCTCCCCTTCCAACTCAACAAATCCAGAAATT...TTTCCTATTCTTCAACCTGCTGACTTCCCTCTGGATTCTTCTGCAACCAGTCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR TCA 90 bp ACAATATCTGGGACTGGTTGCAGAAGAATCCAGAGGGAAGTCAGCAGGTTGAAGAATTTCTGGATTTGTTaGGTTGGAAGGGGAGCCTGT +
Preference number: 4 (lower is better)
Translates to: TISGTGCRRIQREVSRLKNFWIC*VGRGAC
Trigger: ACAGGCTCCCCTTCCAACTCAACAAATCCAGAAATT...CTTCAACCTGCTGACTTCCCTCTGGATTCTTCTGCAACCAGTCCCAGATATTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR TCA 90 bp GAACTATTTGGCCAGGGAATCCTACCAGTGAGTGATTTCCCTGGGGGCAGTAACTCTTGGTTCAGATCCTaGAACTCTTTATACTGCTCT +
Preference number: 4 (lower is better)
Translates to: ELFGQGILPVSDFPGGSNSWFRS*NSLYCS
Trigger: AGAGCAGTATAAAGAGTTTCAGGATCTGAACCAAGA...GTTACTGCCCCCAGGGAAATCACTCACTGGTAGGATTCCCTGGCCAAATAGTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR TCA 90 bp CTCCACTCCTACTCCATTAGGATTTCTCTGACTTCTAGGTTCCTCCACCTCAAAAGTGATTGCAGAGTCTaGACCATGGAAACTTGCCTG +
Preference number: 4 (lower is better)
Translates to: LHSYSIRISLTSRFLHLKSDCRV*TMETCL
Trigger: CAGGCAAGTTTCCATGGTTCAGACTCTGCAATCACT...TTTGAGGTGGAGGAACCTAGAAGTCAGAGAAATCCTAATGGAGTAGGAGTGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR TCA 90 bp CTCCACTCCTACTCCATTAGGATTTCTCTGACTTCTAGGTTCCTCCACCTCAAAGCAAGGCCTTTTCCCTaGAATGCTGATTTTTGGAGG +
Preference number: 4 (lower is better)
Translates to: LHSYSIRISLTSRFLHLKARPFP*NADFWR
Trigger: CCTCCAAAAATCAGCATTTCAGGGAAAAGGCCTTGC...TTTGAGGTGGAGGAACCTAGAAGTCAGAGAAATCCTAATGGAGTAGGAGTGGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR TCA 90 bp GATAAGTTCACAGTTGAAAGAACCATTTGCCAGAAGCCTGGCAAACAATTTGCAAGGGAATCCTACCAGTaGGTGATTTCCCTGGGGGCA +
Preference number: 4 (lower is better)
Translates to: DKFTVERTICQKPGKQFARESYQ*VISLGA
Trigger: TGCCCCCAGGGAAATCACTCACTGGTAGGATTCCCT...TGCAAATTGTTTGCCAGGCTTCTGGCAAATGGTTCTTTCAACTGTGAACTTATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR TCA 90 bp ATAAAATGGCACAATATCTGGGACTGGTTGCAGAAGAATCCAGAGGGAAGTCAGCATTGTCTTAGCAGGTaGCTTCAATCCAGAGAGGGG +
Preference number: 4 (lower is better)
Translates to: IKWHNIWDWLQKNPEGSQHCLSR*LQSREG
Trigger: CCCCTCTCTGGATTGAAGTCACCTGCTAAGACAATG...CTGACTTCCCTCTGGATTCTTCTGCAACCAGTCCCAGATATTGTGCCATTTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378023.8
ENST00000540914.5
CDS-3UTR TCA 90 bp TGCAGAAGAATCCAGAGGGAAGTCAGCAGGTTGAAGAATAGGAAACAAGATTGGCATTGTCTTAGCAGGTaGCTTCAATCCAGAGAGGGG +
Preference number: 4 (lower is better)
Translates to: CRRIQREVSRLKNRKQDWHCLSR*LQSREG
Trigger: CCCCTCTCTGGATTGAAGTCACCTGCTAAGACAATG...CCAATCTTGTTTCCTATTCTTCAACCTGCTGACTTCCCTCTGGATTCTTCTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378023.8
ENST00000540914.5
CDS-3UTR TCA 90 bp TGCAGAAGAATCCAGAGGGAAGTCAGCAGGTTGAAGAATAGGAAACAAGATTGGAGATTGGCCATGAGTTaGTCACTGAGGAGGTTGAGG +
Preference number: 4 (lower is better)
Translates to: CRRIQREVSRLKNRKQDWRLAMS*SLRRLR
Trigger: CCTCAACCTCCTCAGTGATCAACTCATGGCCAATCT...CCAATCTTGTTTCCTATTCTTCAACCTGCTGACTTCCCTCTGGATTCTTCTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR TCA 90 bp GCATTCTATAATGCTGGCCACATGCAGAAACATTACAAGCAAAACAATGCCAGTCTCATTCACCCTCAGTaGTCTCCGTCCAAGAGGCAG +
Preference number: 4 (lower is better)
Translates to: AFYNAGHMQKHYKQNNASLIHPQ*SPSKRQ
Trigger: CTGCCTCTTGGACGGAGATCACTGAGGGTGAATGAG...ACTGGCATTGTTTTGCTTGTAATGTTTCTGCATGTGGCCAGCATTATAGAATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR GCA 90 bp TTTCAACCATTTAACATAAGCTATAGGCTATACCTCCTAACTACAGACTGTACACCGCACCTCCGGCTTTaGAGACAGCCTGAGCTGGCT +
Preference number: 4 (lower is better)
Translates to: FQPFNISYRLYLLTTDCTPHLRL*RQPELA
Trigger: AGCCAGCTCAGGCTGTCTGCAAAGCCGGAGGTGCGG...TGTACAGTCTGTAGTTAGGAGGTATAGCCTATAGCTTATGTTAAATGGTTGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259698.9
CDS-3UTR GCA 90 bp CTCCACTCCTACTCCATTAGGATTTCTCTGACTTCTAGGTTCCTCCACCTCAAAGATGTTGCGAAGGCTTaGTTCATTTTGCTGGCACCA +
Preference number: 4 (lower is better)
Translates to: LHSYSIRISLTSRFLHLKDVAKA*FILLAP
Trigger: TGGTGCCAGCAAAATGAAGCAAGCCTTCGCAACATC...TTTGAGGTGGAGGAACCTAGAAGTCAGAGAAATCCTAATGGAGTAGGAGTGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR GCA 90 bp AAAATGGCACAATATCTGGGACTGGTTGCAGAAGAATCCAGAGGGAAGTCAGCAGATGTTGCGAAGGCTTaGTTCATTTTGCTGGCACCA +
Preference number: 4 (lower is better)
Translates to: KMAQYLGLVAEESRGKSADVAKA*FILLAP
Trigger: TGGTGCCAGCAAAATGAAGCAAGCCTTCGCAACATC...TGCTGACTTCCCTCTGGATTCTTCTGCAACCAGTCCCAGATATTGTGCCATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR GCA 90 bp CTCCACTCCTACTCCATTAGGATTTCTCTGACTTCTAGGTTCCTCCACCTCAAATTCAGTTTCCACCGCTaGCGGCCATACTTCATGAAA +
Preference number: 4 (lower is better)
Translates to: LHSYSIRISLTSRFLHLKFSFHR*RPYFMK
Trigger: TTTCATGAAGTATGGCCGGCAGCGGTGGAAACTGAA...TTTGAGGTGGAGGAACCTAGAAGTCAGAGAAATCCTAATGGAGTAGGAGTGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR GCA 90 bp ATGTTTGAACTATTTGGCCAGGGAATCCTACCAGTGAGTGATTTCCCTGGGGGCCATCCCAGCTCTGCTTaGCATTTACTTCTATTTTGC +
Preference number: 4 (lower is better)
Translates to: MFELFGQGILPVSDFPGGHPSSA*HLLLFC
Trigger: GCAAAATAGAAGTAAATGGCAAGCAGAGCTGGGATG...GCCCCCAGGGAAATCACTCACTGGTAGGATTCCCTGGCCAAATAGTTCAAACAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR GCA 90 bp AATGGCACAATATCTGGGACTGGTTGCAGAAGAATCCAGAGGGAAGTCAGCAGGCATCCCAGCTCTGCTTaGCATTTACTTCTATTTTGC +
Preference number: 4 (lower is better)
Translates to: NGTISGTGCRRIQREVSRHPSSA*HLLLFC
Trigger: GCAAAATAGAAGTAAATGGCAAGCAGAGCTGGGATG...CCTGCTGACTTCCCTCTGGATTCTTCTGCAACCAGTCCCAGATATTGTGCCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR GCA 90 bp ATGTTTGAACTATTTGGCCAGGGAATCCTACCAGTGAGTGATTTCCCTGGGGGCTCTCCATCCCAGCTCTaGTTGCCATTTACTTCTATT +
Preference number: 4 (lower is better)
Translates to: MFELFGQGILPVSDFPGGSPSQL*LPFTSI
Trigger: AATAGAAGTAAATGGCAAGCAGAGCTGGGATGGAGA...GCCCCCAGGGAAATCACTCACTGGTAGGATTCCCTGGCCAAATAGTTCAAACAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR GCA 90 bp GATAAGTTCACAGTTGAAAGAACCATTTGCCAGAAGCCTGGCAAACAATTTGCATTCTCAAGGAACAGGTaGTCAGCCCCAGCACCTGAG +
Preference number: 4 (lower is better)
Translates to: DKFTVERTICQKPGKQFAFSRNR*SAPAPE
Trigger: CTCAGGTGCTGGGGCTGAGCACCTGTTCCTTGAGAA...TGCAAATTGTTTGCCAGGCTTCTGGCAAATGGTTCTTTCAACTGTGAACTTATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR GCA 90 bp GAACTATTTGGCCAGGGAATCCTACCAGTGAGTGATTTCCCTGGGGGCAGTAACTTGCAGAAGTGCTTCTaGAACATCATTCTCAAGGAA +
Preference number: 4 (lower is better)
Translates to: ELFGQGILPVSDFPGGSNLQKCF*NIILKE
Trigger: TTCCTTGAGAATGATGTTGCAGAAGCACTTCTGCAA...GTTACTGCCCCCAGGGAAATCACTCACTGGTAGGATTCCCTGGCCAAATAGTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR GCA 90 bp TGGATAAAATGGCACAATATCTGGGACTGGTTGCAGAAGAATCCAGAGGGAAGTGCCTCCTCAGACTCTTaGAGAAGTGCTTCTGCAACA +
Preference number: 4 (lower is better)
Translates to: WIKWHNIWDWLQKNPEGSASSDS*RSASAT
Trigger: TGTTGCAGAAGCACTTCTGCAAGAGTCTGAGGAGGC...ACTTCCCTCTGGATTCTTCTGCAACCAGTCCCAGATATTGTGCCATTTTATCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR GCA 90 bp CTCCACTCCTACTCCATTAGGATTTCTCTGACTTCTAGGTTCCTCCACCTCAAAAGCCTCTTGACCAGCTaGTTTGTGATGTTTCCTTCC +
Preference number: 4 (lower is better)
Translates to: LHSYSIRISLTSRFLHLKSLLTS*FVMFPS
Trigger: GGAAGGAAACATCACAAAGCAGCTGGTCAAGAGGCT...TTTGAGGTGGAGGAACCTAGAAGTCAGAGAAATCCTAATGGAGTAGGAGTGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR GCA 90 bp GGGACTGGTTGCAGAAGAATCCAGAGGGAAGTCAGCAGGTTGAAGAATAGGAAACATCTAGAAAGGATCTaGAGCCTTCAGATTCTCCAC +
Preference number: 4 (lower is better)
Translates to: GTGCRRIQREVSRLKNRKHLERI*SLQILH
Trigger: GTGGAGAATCTGAAGGCTGCAGATCCTTTCTAGATG...TTTCCTATTCTTCAACCTGCTGACTTCCCTCTGGATTCTTCTGCAACCAGTCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR GCA 90 bp GGGGTGGGTCGAATGGGACAAATTCTGCAAGTTAGAAGCACTAAATGTCCTCCACATCTAGAAAGGATCTaGAGCCTTCAGATTCTCCAC +
Preference number: 4 (lower is better)
Translates to: GVGRMGQILQVRSTKCPPHLERI*SLQILH
Trigger: GTGGAGAATCTGAAGGCTGCAGATCCTTTCTAGATG...TGGAGGACATTTAGTGCTTCTAACTTGCAGAATTTGTCCCATTCGACCCACCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR GCA 90 bp GATAAGTTCACAGTTGAAAGAACCATTTGCCAGAAGCCTGGCAAACAATTTGCAAACTGGAAGACCTGCTaGGGCTTACTGCTGGCTTGC +
Preference number: 4 (lower is better)
Translates to: DKFTVERTICQKPGKQFANWKTC*GLLLAC
Trigger: GCAAGCCAGCAGTAAGCCGCAGCAGGTCTTCCAGTT...TGCAAATTGTTTGCCAGGCTTCTGGCAAATGGTTCTTTCAACTGTGAACTTATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR GCA 90 bp CATTTTTATTTCAGTTGTCGTGTCTCTCAGGCTCTAAACAATTTCCAGCCCAAATGGGAGAGGACTTCCTaGCACACTGGTCCCAACTCC +
Preference number: 4 (lower is better)
Translates to: HFYFSCRVSQALNNFQPKWERTS*HTGPNS
Trigger: GGAGTTGGGACCAGTGTGGCAGGAAGTCCTCTCCCA...TTTGGGCTGGAAATTGTTTAGAGCCTGAGAGACACGACAACTGAAATAAAAATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR GCA 90 bp ATTACACTCACATATATTGTTTTGATACCTTGGCATACCCCACCTTGTACACTCTGTCCAGGCTCTCGTTaGCTGTGGTCAGTGGGAGAG +
Preference number: 4 (lower is better)
Translates to: ITLTYIVLIPWHTPPCTLCPGSR*LWSVGE
Trigger: CTCTCCCACTGACCACAGGCAACGAGAGCCTGGACA...GAGTGTACAAGGTGGGGTATGCCAAGGTATCAAAACAATATATGTGAGTGTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR GCA 90 bp GATATGTACACGATAAGTTCACAGTTGAAAGAACCATTTGCCAGAAGCCTGGCAAGACACCAACAGGGCTaGAGCACTTGGTCCAGAATG +
Preference number: 4 (lower is better)
Translates to: DMYTISSQLKEPFARSLARHQQG*STWSRM
Trigger: CATTCTGGACCAAGTGCTGCAGCCCTGTTGGTGTCT...TGCCAGGCTTCTGGCAAATGGTTCTTTCAACTGTGAACTTATCGTGTACATATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR GCA 90 bp ATGTTTGAACTATTTGGCCAGGGAATCCTACCAGTGAGTGATTTCCCTGGGGGCTCGAAACACTGGGTCTaGAAGTCCTGGATATTCTTT +
Preference number: 4 (lower is better)
Translates to: MFELFGQGILPVSDFPGGSKHWV*KSWIFF
Trigger: AAAGAATATCCAGGACTTGCAGACCCAGTGTTTCGA...GCCCCCAGGGAAATCACTCACTGGTAGGATTCCCTGGCCAAATAGTTCAAACAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR GCA 90 bp CTCCACTCCTACTCCATTAGGATTTCTCTGACTTCTAGGTTCCTCCACCTCAAACTGATTTTTGGAGGCTaGTGCCAAGTAAAGCGTCAC +
Preference number: 4 (lower is better)
Translates to: LHSYSIRISLTSRFLHLKLIFGG*CQVKRH
Trigger: GTGACGCTTTACTTGGCAGCAGCCTCCAAAAATCAG...TTTGAGGTGGAGGAACCTAGAAGTCAGAGAAATCCTAATGGAGTAGGAGTGGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR GCA 90 bp GATATGTACACGATAAGTTCACAGTTGAAAGAACCATTTGCCAGAAGCCTGGCATCACCCAGTCTGGAGTaGAGTGGGGCAATTATGGCT +
Preference number: 4 (lower is better)
Translates to: DMYTISSQLKEPFARSLASPSLE*SGAIMA
Trigger: AGCCATAATTGCCCCACTGCACTCCAGACTGGGTGA...TGCCAGGCTTCTGGCAAATGGTTCTTTCAACTGTGAACTTATCGTGTACATATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR GCA 90 bp ATAAAATGGCACAATATCTGGGACTGGTTGCAGAAGAATCCAGAGGGAAGTCAGCCTCCTCCCCCATGTTaGTGCAGGTTTTTAAATCCC +
Preference number: 4 (lower is better)
Translates to: IKWHNIWDWLQKNPEGSQPPPPC*CRFLNP
Trigger: GGGATTTAAAAACCTGCAGCAACATGGGGGAGGAGG...CTGACTTCCCTCTGGATTCTTCTGCAACCAGTCCCAGATATTGTGCCATTTTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000378023.8
ENST00000540914.5
CDS-3UTR GCA 90 bp ATCATGGGAGCAATCCCATTCTCTGGCCTGGAGCATTCTATAATGCTGGCCACATTACAAGCAAAACAATaGCAGTTGCTATGGGCACAG +
Preference number: 4 (lower is better)
Translates to: IMGAIPFSGLEHSIMLATLQAKQ*QLLWAQ
Trigger: CTGTGCCCATAGCAACTGGCATTGTTTTGCTTGTAA...TGTGGCCAGCATTATAGAATGCTCCAGGCCAGAGAATGGGATTGCTCCCATGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR GCA 90 bp TTTCAACCATTTAACATAAGCTATAGGCTATACCTCCTAACTACAGACTGTACACCTGTGGGCTTCAGATaGCCGAACCCACCAGGGTGG +
Preference number: 4 (lower is better)
Translates to: FQPFNISYRLYLLTTDCTPVGFR*PNPPGW
Trigger: CCACCCTGGTGGGTTCGGGCATCTGAAGCCCACAGG...TGTACAGTCTGTAGTTAGGAGGTATAGCCTATAGCTTATGTTAAATGGTTGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538035.6
CDS-3UTR GCA 90 bp GATAAAATGGCACAATATCTGGGACTGGTTGCAGAAGAATCCAGAGGGAAGTCAGGCATCCTTCAGTTCTaGTTGCAAAAAGTGCGCGTG +
Preference number: 4 (lower is better)
Translates to: DKMAQYLGLVAEESRGKSGILQF*LQKVRV
Trigger: CACGCGCACTTTTTGCAAGCAGAACTGAAGGATGCC...TGACTTCCCTCTGGATTCTTCTGCAACCAGTCCCAGATATTGTGCCATTTTATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000643623.1
CDS-3UTR GCA 90 bp GATATGTACACGATAAGTTCACAGTTGAAAGAACCATTTGCCAGAAGCCTGGCAGGCAGCTTCCGCATCTaGCCTGAAGAAAGCAGTTTC +
Preference number: 4 (lower is better)
Translates to: DMYTISSQLKEPFARSLAGSFRI*PEESSF
Trigger: GAAACTGCTTTCTTCAGGGCAGATGCGGAAGCTGCC...TGCCAGGCTTCTGGCAAATGGTTCTTTCAACTGTGAACTTATCGTGTACATATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613507.4
CDS-3UTR CCA 90 bp GGGACTGGTTGCAGAAGAATCCAGAGGGAAGTCAGCAGGTTGAAGAATAGGAAAAAACCCGCAAAGGACTaGCTTCTAATGATCCCATTG +
Preference number: 4 (lower is better)
Translates to: GTGCRRIQREVSRLKNRKKPAKD*LLMIPL
Trigger: CAATGGGATCATTAGAAGCCAGTCCTTTGCGGGTTT...TTTCCTATTCTTCAACCTGCTGACTTCCCTCTGGATTCTTCTGCAACCAGTCCC
47% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR CCA 90 bp AATGCCTTGGGCATGACAAGAAGCAGCCCTGCTTCCTCTGGAGCTCTGCCTCAAGGATTGTTGTTTTTGTaGCCTAAATTGTGCATTTTC +
Preference number: 4 (lower is better)
Translates to: NALGMTRSSPASSGALPQGLLFL*PKLCIF
Trigger: GAAAATGCACAATTTAGGCCACAAAAACAACAATCC...TTGAGGCAGAGCTCCAGAGGAAGCAGGGCTGCTTCTTGTCATGCCCAAGGCATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000645100.1
ENST00000647136.1
CDS-3UTR CCA 90 bp GATAAGTTCACAGTTGAAAGAACCATTTGCCAGAAGCCTGGCAAACAATTTGCATTGCTGGCACCATCCTaGAGGCGTCGCTGGATACAA +
Preference number: 4 (lower is better)
Translates to: DKFTVERTICQKPGKQFALLAPS*RRRWIQ
Trigger: TTGTATCCAGCGACGCCTCCAGGATGGTGCCAGCAA...TGCAAATTGTTTGCCAGGCTTCTGGCAAATGGTTCTTTCAACTGTGAACTTATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CCA 90 bp AATGGCACAATATCTGGGACTGGTTGCAGAAGAATCCAGAGGGAAGTCAGCAGGCTAGCTCCACTTCAATaGTGCACATATTCTCTGTGT +
Preference number: 4 (lower is better)
Translates to: NGTISGTGCRRIQREVSRLAPLQ*CTYSLC
Trigger: ACACAGAGAATATGTGCACCATTGAAGTGGAGCTAG...CCTGCTGACTTCCCTCTGGATTCTTCTGCAACCAGTCCCAGATATTGTGCCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR CCA 90 bp TGGATAAAATGGCACAATATCTGGGACTGGTTGCAGAAGAATCCAGAGGGAAGTCTGCAAACAGCTCTTTaGTCTCACAGGTCACGCTAC +
Preference number: 4 (lower is better)
Translates to: WIKWHNIWDWLQKNPEGSLQTAL*SHRSRY
Trigger: GTAGCGTGACCTGTGAGACCAAAGAGCTGTTTGCAG...ACTTCCCTCTGGATTCTTCTGCAACCAGTCCCAGATATTGTGCCATTTTATCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR CCA 90 bp ATAAAATGGCACAATATCTGGGACTGGTTGCAGAAGAATCCAGAGGGAAGTCAGTACCCTGGCTGTACATaGACATTCTCCTCTGAAGGG +
Preference number: 4 (lower is better)
Translates to: IKWHNIWDWLQKNPEGSQYPGCT*TFSSEG
Trigger: CCCTTCAGAGGAGAATGTCCATGTACAGCCAGGGTA...CTGACTTCCCTCTGGATTCTTCTGCAACCAGTCCCAGATATTGTGCCATTTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR CCA 90 bp CTCCACTCCTACTCCATTAGGATTTCTCTGACTTCTAGGTTCCTCCACCTCAAACTGGATTTGTTGAGTTaGAAGGGGAGCCTGTTGAGT +
Preference number: 4 (lower is better)
Translates to: LHSYSIRISLTSRFLHLKLDLLS*KGSLLS
Trigger: ACTCAACAGGCTCCCCTTCCAACTCAACAAATCCAG...TTTGAGGTGGAGGAACCTAGAAGTCAGAGAAATCCTAATGGAGTAGGAGTGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CCA 90 bp GATATGTACACGATAAGTTCACAGTTGAAAGAACCATTTGCCAGAAGCCTGGCATTTTCTGGGCTCCTCTaGGTCTTCCTCCTTCAGGTG +
Preference number: 4 (lower is better)
Translates to: DMYTISSQLKEPFARSLAFSGLL*VFLLQV
Trigger: CACCTGAAGGAGGAAGACCCAGAGGAGCCCAGAAAA...TGCCAGGCTTCTGGCAAATGGTTCTTTCAACTGTGAACTTATCGTGTACATATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CCA 90 bp CATTTTTATTTCAGTTGTCGTGTCTCTCAGGCTCTAAACAATTTCCAGCCCAAACCGAGGCAGGTTTTCTaGGCTCCTCTGGGTCTTCCT +
Preference number: 4 (lower is better)
Translates to: HFYFSCRVSQALNNFQPKPRQVF*APLGLP
Trigger: AGGAAGACCCAGAGGAGCCCAGAAAACCTGCCTCGG...TTTGGGCTGGAAATTGTTTAGAGCCTGAGAGACACGACAACTGAAATAAAAATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CCA 90 bp GAGCATTCTATAATGCTGGCCACATGCAGAAACATTACAAGCAAAACAATGCCACCTGTCTGTGGCCATTaGCACCTCTGCAGATGTGAG +
Preference number: 4 (lower is better)
Translates to: EHSIMLATCRNITSKTMPPVCGH*HLCRCE
Trigger: CTCACATCTGCAGAGGTGCCAATGGCCACAGACAGG...TGGCATTGTTTTGCTTGTAATGTTTCTGCATGTGGCCAGCATTATAGAATGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR CCA 90 bp CATTTTTATTTCAGTTGTCGTGTCTCTCAGGCTCTAAACAATTTCCAGCCCAAAAGAGCAGCCTGTCTGTaGCCATTGGCACCTCTGCAG +
Preference number: 4 (lower is better)
Translates to: HFYFSCRVSQALNNFQPKRAACL*PLAPLQ
Trigger: CTGCAGAGGTGCCAATGGCCACAGACAGGCTGCTCT...TTTGGGCTGGAAATTGTTTAGAGCCTGAGAGACACGACAACTGAAATAAAAATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CCA 90 bp ATTACACTCACATATATTGTTTTGATACCTTGGCATACCCCACCTTGTACACTCAGAGCAGCCTGTCTGTaGCCATTGGCACCTCTGCAG +
Preference number: 4 (lower is better)
Translates to: ITLTYIVLIPWHTPPCTLRAACL*PLAPLQ
Trigger: CTGCAGAGGTGCCAATGGCCACAGACAGGCTGCTCT...GAGTGTACAAGGTGGGGTATGCCAAGGTATCAAAACAATATATGTGAGTGTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CCA 90 bp GATATGTACACGATAAGTTCACAGTTGAAAGAACCATTTGCCAGAAGCCTGGCAGACTTCCTGCCACACTaGTCCCAACTCCTGTGTCTT +
Preference number: 4 (lower is better)
Translates to: DMYTISSQLKEPFARSLADFLPH*SQLLCL
Trigger: AAGACACAGGAGTTGGGACCAGTGTGGCAGGAAGTC...TGCCAGGCTTCTGGCAAATGGTTCTTTCAACTGTGAACTTATCGTGTACATATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CCA 90 bp CATTTTTATTTCAGTTGTCGTGTCTCTCAGGCTCTAAACAATTTCCAGCCCAAAGTTGCCTGTGGTCAGTaGGAGAGGACTTCCTGCCAC +
Preference number: 4 (lower is better)
Translates to: HFYFSCRVSQALNNFQPKVACGQ*ERTSCH
Trigger: GTGGCAGGAAGTCCTCTCCCACTGACCACAGGCAAC...TTTGGGCTGGAAATTGTTTAGAGCCTGAGAGACACGACAACTGAAATAAAAATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CCA 90 bp CATTTTTATTTCAGTTGTCGTGTCTCTCAGGCTCTAAACAATTTCCAGCCCAAAGGCTCTCGTTGCCTGTaGTCAGTGGGAGAGGACTTC +
Preference number: 4 (lower is better)
Translates to: HFYFSCRVSQALNNFQPKGSRCL*SVGEDF
Trigger: GAAGTCCTCTCCCACTGACCACAGGCAACGAGAGCC...TTTGGGCTGGAAATTGTTTAGAGCCTGAGAGACACGACAACTGAAATAAAAATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CCA 90 bp GATATGTACACGATAAGTTCACAGTTGAAAGAACCATTTGCCAGAAGCCTGGCAATTTGCTGCACGAGTTaGGTGCAGTACTGGAGGTGC +
Preference number: 4 (lower is better)
Translates to: DMYTISSQLKEPFARSLAICCTS*VQYWRC
Trigger: GCACCTCCAGTACTGCACCCAACTCGTGCAGCAAAT...TGCCAGGCTTCTGGCAAATGGTTCTTTCAACTGTGAACTTATCGTGTACATATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CCA 90 bp GATAAGTTCACAGTTGAAAGAACCATTTGCCAGAAGCCTGGCAAACAATTTGCACATCACTCTGTCCGCTaGGCTGTGGTAGACACCAAC +
Preference number: 4 (lower is better)
Translates to: DKFTVERTICQKPGKQFAHHSVR*AVVDTN
Trigger: GTTGGTGTCTACCACAGCCCAGCGGACAGAGTGATG...TGCAAATTGTTTGCCAGGCTTCTGGCAAATGGTTCTTTCAACTGTGAACTTATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CCA 90 bp GATATGTACACGATAAGTTCACAGTTGAAAGAACCATTTGCCAGAAGCCTGGCAGCAGAGTCTGAACCATaGAAACTTGCCTGGCCAGCT +
Preference number: 4 (lower is better)
Translates to: DMYTISSQLKEPFARSLAAESEP*KLAWPA
Trigger: AGCTGGCCAGGCAAGTTTCCATGGTTCAGACTCTGC...TGCCAGGCTTCTGGCAAATGGTTCTTTCAACTGTGAACTTATCGTGTACATATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CCA 90 bp CATTTTTATTTCAGTTGTCGTGTCTCTCAGGCTCTAAACAATTTCCAGCCCAAACTGAGTACTTCCTGCTaGGCCAGGAGGTTGCTGGGA +
Preference number: 4 (lower is better)
Translates to: HFYFSCRVSQALNNFQPKLSTSC*ARRLLG
Trigger: TCCCAGCAACCTCCTGGCCCAGCAGGAAGTACTCAG...TTTGGGCTGGAAATTGTTTAGAGCCTGAGAGACACGACAACTGAAATAAAAATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CCA 90 bp GATATGTACACGATAAGTTCACAGTTGAAAGAACCATTTGCCAGAAGCCTGGCACAGTCTGGAGTGCAGTaGGGCAATTATGGCTCACTG +
Preference number: 4 (lower is better)
Translates to: DMYTISSQLKEPFARSLAQSGVQ*GNYGSL
Trigger: CAGTGAGCCATAATTGCCCCACTGCACTCCAGACTG...TGCCAGGCTTCTGGCAAATGGTTCTTTCAACTGTGAACTTATCGTGTACATATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CCA 90 bp GGGACTGGTTGCAGAAGAATCCAGAGGGAAGTCAGCAGGTTGAAGAATAGGAAACACAATATCTGGGACTaGTTGCAGAAGAATCCAGAG +
Preference number: 4 (lower is better)
Translates to: GTGCRRIQREVSRLKNRKHNIWD*LQKNPE
Trigger: CTCTGGATTCTTCTGCAACCAGTCCCAGATATTGTG...TTTCCTATTCTTCAACCTGCTGACTTCCCTCTGGATTCTTCTGCAACCAGTCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR CCA 90 bp GGGGTGGGTCGAATGGGACAAATTCTGCAAGTTAGAAGCACTAAATGTCCTCCATGGCACAAAAGCACATaGGAAAACGTCTTTCGGTCT +
Preference number: 4 (lower is better)
Translates to: GVGRMGQILQVRSTKCPPWHKST*ENVFRS
Trigger: AGACCGAAAGACGTTTTCCCATGTGCTTTTGTGCCA...TGGAGGACATTTAGTGCTTCTAACTTGCAGAATTTGTCCCATTCGACCCACCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR CCA 90 bp ATAAAATGGCACAATATCTGGGACTGGTTGCAGAAGAATCCAGAGGGAAGTCAGAAGAGGATGCTGGGGTaGGTCGAATGGGACAAATTC +
Preference number: 4 (lower is better)
Translates to: IKWHNIWDWLQKNPEGSQKRMLG*VEWDKF
Trigger: GAATTTGTCCCATTCGACCCACCCCAGCATCCTCTT...CTGACTTCCCTCTGGATTCTTCTGCAACCAGTCCCAGATATTGTGCCATTTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000510784.8
ENST00000540914.5
CDS-3UTR CCA 90 bp TGGATAAAATGGCACAATATCTGGGACTGGTTGCAGAAGAATCCAGAGGGAAGTTATTCAAGAGGATGCTaGGGTGGGTCGAATGGGACA +
Preference number: 4 (lower is better)
Translates to: WIKWHNIWDWLQKNPEGSYSRGC*GGSNGT
Trigger: TGTCCCATTCGACCCACCCCAGCATCCTCTTGAATA...ACTTCCCTCTGGATTCTTCTGCAACCAGTCCCAGATATTGTGCCATTTTATCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510784.8
ENST00000540914.5
CDS-3UTR CCA 90 bp TCCAAATATTCAAGAGGATGCTGGGGTGGGTCGAATGGGACAAATTCTGCAAGTCAATGCCAGTTGCTATaGGCACAGAGTTGGAGAGAA +
Preference number: 4 (lower is better)
Translates to: SKYSRGCWGGSNGTNSASQCQLL*AQSWRE
Trigger: TTCTCTCCAACTCTGTGCCCATAGCAACTGGCATTG...ACTTGCAGAATTTGTCCCATTCGACCCACCCCAGCATCCTCTTGAATATTTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR CCA 90 bp AAATGGCACAATATCTGGGACTGGTTGCAGAAGAATCCAGAGGGAAGTCAGCAGCCTAAAACCTGCTCATaGCAAAGGAACAAAAGGGTC +
Preference number: 4 (lower is better)
Translates to: KWHNIWDWLQKNPEGSQQPKTCS*QRNKRV
Trigger: GACCCTTTTGTTCCTTTGCCATGAGCAGGTTTTAGG...CTGCTGACTTCCCTCTGGATTCTTCTGCAACCAGTCCCAGATATTGTGCCATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510784.8
CDS-3UTR CCA 90 bp CCTGGCATCATGGGAGCAATCCCATTCTCTGGCCTGGAGCATTCTATAATGCTGTCAACCACAAAGCCTTaGGAAACAGAACTGCTATAT +
Preference number: 4 (lower is better)
Translates to: PGIMGAIPFSGLEHSIMLSTTKP*ETELLY
Trigger: ATATAGCAGTTCTGTTTCCCAAGGCTTTGTGGTTGA...CAGCATTATAGAATGCTCCAGGCCAGAGAATGGGATTGCTCCCATGATGCCAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510784.8
ENST00000540914.5
CDS-3UTR CCA 90 bp TTTCAACCATTTAACATAAGCTATAGGCTATACCTCCTAACTACAGACTGTACACTGGTCGGTAGTCCTTaGCCCGTTCCTCCACTCCCC +
Preference number: 4 (lower is better)
Translates to: FQPFNISYRLYLLTTDCTLVGSP*PVPPLP
Trigger: GGGGAGTGGAGGAACGGGCCAAGGACTACCGACCAG...TGTACAGTCTGTAGTTAGGAGGTATAGCCTATAGCTTATGTTAAATGGTTGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538035.6
CDS-3UTR TCA 90 bp ATTACACTCACATATATTGTTTTGATACCTTGGCATACCCCACCTTGTACACTCGGGATCCTACCAACATaGTTTCCGGGAGTCTGGTCG +
Preference number: 4 (lower is better)
Translates to: ITLTYIVLIPWHTPPCTLGILPT*FPGVWS
Trigger: CGACCAGACTCCCGGAAATCATGTTGGTAGGATCCC...GAGTGTACAAGGTGGGGTATGCCAAGGTATCAAAACAATATATGTGAGTGTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR TCA 90 bp TTTCAACCATTTAACATAAGCTATAGGCTATACCTCCTAACTACAGACTGTACATTTCCTGGAGGCCGCTaGAACCCGCAAAGGACTGGC +
Preference number: 4 (lower is better)
Translates to: FQPFNISYRLYLLTTDCTFPGGR*NPQRTG
Trigger: GCCAGTCCTTTGCGGGTTTCAGCGGCCTCCAGGAAA...TGTACAGTCTGTAGTTAGGAGGTATAGCCTATAGCTTATGTTAAATGGTTGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR TCA 90 bp TCCAAATATTCAAGAGGATGCTGGGGTGGGTCGAATGGGACAAATTCTGCAAGTCGGAGGAATTTTCAATaGAGGAGTTACACCTGGATC +
Preference number: 4 (lower is better)
Translates to: SKYSRGCWGGSNGTNSASRRNFQ*RSYTWI
Trigger: GATCCAGGTGTAACTCCTTCATTGAAAATTCCTCCG...ACTTGCAGAATTTGTCCCATTCGACCCACCCCAGCATCCTCTTGAATATTTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR TCA 90 bp GATAAGTTCACAGTTGAAAGAACCATTTGCCAGAAGCCTGGCAAACAATTTGCATTCTTCAGTTTGGCCTaGGGCTTCTTGAGAGCGGAG +
Preference number: 4 (lower is better)
Translates to: DKFTVERTICQKPGKQFAFFSLA*GFLRAE
Trigger: CTCCGCTCTCAAGAAGCCTCAGGCCAAACTGAAGAA...TGCAAATTGTTTGCCAGGCTTCTGGCAAATGGTTCTTTCAACTGTGAACTTATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR TCA 90 bp GAGCATTCTATAATGCTGGCCACATGCAGAAACATTACAAGCAAAACAATGCCATTCTTCAGTTTGGCCTaGGGCTTCTTGAGAGCGGAG +
Preference number: 4 (lower is better)
Translates to: EHSIMLATCRNITSKTMPFFSLA*GFLRAE
Trigger: CTCCGCTCTCAAGAAGCCTCAGGCCAAACTGAAGAA...TGGCATTGTTTTGCTTGTAATGTTTCTGCATGTGGCCAGCATTATAGAATGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR TCA 90 bp GATATGTACACGATAAGTTCACAGTTGAAAGAACCATTTGCCAGAAGCCTGGCATCCAGCTCCGTCTGGTaGACCTCCAGATATTCATCA +
Preference number: 4 (lower is better)
Translates to: DMYTISSQLKEPFARSLASSSVW*TSRYSS
Trigger: TGATGAATATCTGGAGGTTCACCAGACGGAGCTGGA...TGCCAGGCTTCTGGCAAATGGTTCTTTCAACTGTGAACTTATCGTGTACATATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR TCA 90 bp AATGGCACAATATCTGGGACTGGTTGCAGAAGAATCCAGAGGGAAGTCAGCAGGTTCATATCTTTTAACTaGGCTGTCAACTTGTCCAGC +
Preference number: 4 (lower is better)
Translates to: NGTISGTGCRRIQREVSRFISFN*AVNLSS
Trigger: GCTGGACAAGTTGACAGCTCAGTTAAAAGATATGAA...CCTGCTGACTTCCCTCTGGATTCTTCTGCAACCAGTCCCAGATATTGTGCCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR TCA 90 bp GGGGTGGGTCGAATGGGACAAATTCTGCAAGTTAGAAGCACTAAATGTCCTCCATCTACCTTACTTATATaGAACTCCAGGCGTCTCATG +
Preference number: 4 (lower is better)
Translates to: GVGRMGQILQVRSTKCPPSTLLI*NSRRLM
Trigger: CATGAGACGCCTGGAGTTTCATATAAGTAAGGTAGA...TGGAGGACATTTAGTGCTTCTAACTTGCAGAATTTGTCCCATTCGACCCACCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR TCA 90 bp AAATGGCACAATATCTGGGACTGGTTGCAGAAGAATCCAGAGGGAAGTCAGCAGTCTACCTTACTTATATaGAACTCCAGGCGTCTCATG +
Preference number: 4 (lower is better)
Translates to: KWHNIWDWLQKNPEGSQQSTLLI*NSRRLM
Trigger: CATGAGACGCCTGGAGTTTCATATAAGTAAGGTAGA...CTGCTGACTTCCCTCTGGATTCTTCTGCAACCAGTCCCAGATATTGTGCCATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR TCA 90 bp ATTCAAGAGGATGCTGGGGTGGGTCGAATGGGACAAATTCTGCAAGTTAGAAGCTCTACCTTACTTATATaGAACTCCAGGCGTCTCATG +
Preference number: 4 (lower is better)
Translates to: IQEDAGVGRMGQILQVRSSTLLI*NSRRLM
Trigger: CATGAGACGCCTGGAGTTTCATATAAGTAAGGTAGA...GCTTCTAACTTGCAGAATTTGTCCCATTCGACCCACCCCAGCATCCTCTTGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR TCA 90 bp ATAAAATGGCACAATATCTGGGACTGGTTGCAGAAGAATCCAGAGGGAAGTCAGCCAGACCTTTCATCTTaGTGGAGAATTCTCCCAGCA +
Preference number: 4 (lower is better)
Translates to: IKWHNIWDWLQKNPEGSQPDLSS*WRILPA
Trigger: TGCTGGGAGAATTCTCCATCAAGATGAAAGGTCTGG...CTGACTTCCCTCTGGATTCTTCTGCAACCAGTCCCAGATATTGTGCCATTTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR TCA 90 bp ATGTTTGAACTATTTGGCCAGGGAATCCTACCAGTGAGTGATTTCCCTGGGGGCATGAAAATTTCATATTaGTCTCCAGGACAGAGGCGT +
Preference number: 4 (lower is better)
Translates to: MFELFGQGILPVSDFPGGMKISY*SPGQRR
Trigger: ACGCCTCTGTCCTGGAGATCAATATGAAATTTTCAT...GCCCCCAGGGAAATCACTCACTGGTAGGATTCCCTGGCCAAATAGTTCAAACAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR TCA 90 bp AATGGCACAATATCTGGGACTGGTTGCAGAAGAATCCAGAGGGAAGTCAGCAGGATGAAAATTTCATATTaGTCTCCAGGACAGAGGCGT +
Preference number: 4 (lower is better)
Translates to: NGTISGTGCRRIQREVSRMKISY*SPGQRR
Trigger: ACGCCTCTGTCCTGGAGATCAATATGAAATTTTCAT...CCTGCTGACTTCCCTCTGGATTCTTCTGCAACCAGTCCCAGATATTGTGCCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR TCA 90 bp GCAATCCCATTCTCTGGCCTGGAGCATTCTATAATGCTGGCCACATGCAGAAACGCCGGCCATACTTCATaGAAATTTCATATTGATCTC +
Preference number: 4 (lower is better)
Translates to: AIPFSGLEHSIMLATCRNAGHTS*KFHIDL
Trigger: GAGATCAATATGAAATTTTCATGAAGTATGGCCGGC...GTTTCTGCATGTGGCCAGCATTATAGAATGCTCCAGGCCAGAGAATGGGATTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR TCA 90 bp ATGTTTGAACTATTTGGCCAGGGAATCCTACCAGTGAGTGATTTCCCTGGGGGCGCCGGCCATACTTCATaGAAATTTCATATTGATCTC +
Preference number: 4 (lower is better)
Translates to: MFELFGQGILPVSDFPGGAGHTS*KFHIDL
Trigger: GAGATCAATATGAAATTTTCATGAAGTATGGCCGGC...GCCCCCAGGGAAATCACTCACTGGTAGGATTCCCTGGCCAAATAGTTCAAACAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR TCA 90 bp AATGGCACAATATCTGGGACTGGTTGCAGAAGAATCCAGAGGGAAGTCAGCAGGGCCGGCCATACTTCATaGAAATTTCATATTGATCTC +
Preference number: 4 (lower is better)
Translates to: NGTISGTGCRRIQREVSRAGHTS*KFHIDL
Trigger: GAGATCAATATGAAATTTTCATGAAGTATGGCCGGC...CCTGCTGACTTCCCTCTGGATTCTTCTGCAACCAGTCCCAGATATTGTGCCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR TCA 90 bp ATATACAGATATGTACACGATAAGTTCACAGTTGAAAGAACCATTTGCCAGAAGCTTGTTCCCAGCGCCTaGGGATGCGGTCATGTCCTC +
Preference number: 4 (lower is better)
Translates to: IYRYVHDKFTVERTICQKLVPSA*GCGHVL
Trigger: GAGGACATGACCGCATCCTCAGGCGCTGGGAACAAG...CTTCTGGCAAATGGTTCTTTCAACTGTGAACTTATCGTGTACATATCTGTATAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR TCA 90 bp GATAAGTTCACAGTTGAAAGAACCATTTGCCAGAAGCCTGGCAAACAATTTGCATTCCTCCTTCAGGTGTaGCTTTGGCTCTTGGCCTTC +
Preference number: 4 (lower is better)
Translates to: DKFTVERTICQKPGKQFAFLLQV*LWLLAF
Trigger: GAAGGCCAAGAGCCAAAGTCACACCTGAAGGAGGAA...TGCAAATTGTTTGCCAGGCTTCTGGCAAATGGTTCTTTCAACTGTGAACTTATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR TCA 90 bp CTCCACTCCTACTCCATTAGGATTTCTCTGACTTCTAGGTTCCTCCACCTCAAAGCACTTGGTCCAGAATaGCAGCAAAGACAGCTTTTT +
Preference number: 4 (lower is better)
Translates to: LHSYSIRISLTSRFLHLKALGPE*QQRQLF
Trigger: AAAAAGCTGTCTTTGCTGTCATTCTGGACCAAGTGC...TTTGAGGTGGAGGAACCTAGAAGTCAGAGAAATCCTAATGGAGTAGGAGTGGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR TCA 90 bp ATGTTTGAACTATTTGGCCAGGGAATCCTACCAGTGAGTGATTTCCCTGGGGGCAAACTGCAAGGCATATaGTGTTTGTCGAAGTATCAC +
Preference number: 4 (lower is better)
Translates to: MFELFGQGILPVSDFPGGKLQGI*CLSKYH
Trigger: GTGATACTTCGACAAACATCATATGCCTTGCAGTTT...GCCCCCAGGGAAATCACTCACTGGTAGGATTCCCTGGCCAAATAGTTCAAACAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR TCA 90 bp ATTACACTCACATATATTGTTTTGATACCTTGGCATACCCCACCTTGTACACTCAACCTCTGCCTCAAGTaGTCCTCCCACCTCAGACTC +
Preference number: 4 (lower is better)
Translates to: ITLTYIVLIPWHTPPCTLNLCLK*SSHLRL
Trigger: GAGTCTGAGGTGGGAGGATCACTTGAGGCAGAGGTT...GAGTGTACAAGGTGGGGTATGCCAAGGTATCAAAACAATATATGTGAGTGTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR TCA 90 bp CATTTTTATTTCAGTTGTCGTGTCTCTCAGGCTCTAAACAATTTCCAGCCCAAAAGGGAATCCTACCAGTaGGTGATTTCCCTGGGGGCA +
Preference number: 4 (lower is better)
Translates to: HFYFSCRVSQALNNFQPKRESYQ*VISLGA
Trigger: TGCCCCCAGGGAAATCACTCACTGGTAGGATTCCCT...TTTGGGCTGGAAATTGTTTAGAGCCTGAGAGACACGACAACTGAAATAAAAATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR TCA 90 bp CTCCACTCCTACTCCATTAGGATTTCTCTGACTTCTAGGTTCCTCCACCTCAAAATGGGACCTGATGTTTaGACTATTTGGCCAGGGAAT +
Preference number: 4 (lower is better)
Translates to: LHSYSIRISLTSRFLHLKMGPDV*TIWPGN
Trigger: ATTCCCTGGCCAAATAGTTCAAACATCAGGTCCCAT...TTTGAGGTGGAGGAACCTAGAAGTCAGAGAAATCCTAATGGAGTAGGAGTGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR TCA 90 bp GTACAACCATGGATAAAATGGCACAATATCTGGGACTGGTTGCAGAAGAATCCAAGTTACTGCCCAGATTaGAGACTCCAAAGTGGGCAG +
Preference number: 4 (lower is better)
Translates to: VQPWIKWHNIWDWLQKNPSYCPD*RLQSGQ
Trigger: CTGCCCACTTTGGAGTCTTCAATCTGGGCAGTAACT...TGGATTCTTCTGCAACCAGTCCCAGATATTGTGCCATTTTATCCATGGTTGTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378023.8
ENST00000540914.5
CDS-3UTR TCA 90 bp GTACAACCATGGATAAAATGGCACAATATCTGGGACTGGTTGCAGAAGAATCCAGCAGGGATCTGTCTCTaGCACTCAAGATGGCACAAA +
Preference number: 4 (lower is better)
Translates to: VQPWIKWHNIWDWLQKNPAGICL*HSRWHK
Trigger: TTTGTGCCATCTTGAGTGTCAGAGACAGATCCCTGC...TGGATTCTTCTGCAACCAGTCCCAGATATTGTGCCATTTTATCCATGGTTGTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510784.8
ENST00000540914.5
CDS-3UTR GCA 90 bp ATATTCAAGAGGATGCTGGGGTGGGTCGAATGGGACAAATTCTGCAAGTTAGAAGATGTTGCGAAGGCTTaGTTCATTTTGCTGGCACCA +
Preference number: 4 (lower is better)
Translates to: IFKRMLGWVEWDKFCKLEDVAKA*FILLAP
Trigger: TGGTGCCAGCAAAATGAAGCAAGCCTTCGCAACATC...TTCTAACTTGCAGAATTTGTCCCATTCGACCCACCCCAGCATCCTCTTGAATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR GCA 90 bp TCTGGCCTGGAGCATTCTATAATGCTGGCCACATGCAGAAACATTACAAGCAAAGATGTTGCGAAGGCTTaGTTCATTTTGCTGGCACCA +
Preference number: 4 (lower is better)
Translates to: SGLEHSIMLATCRNITSKDVAKA*FILLAP
Trigger: TGGTGCCAGCAAAATGAAGCAAGCCTTCGCAACATC...TTTGCTTGTAATGTTTCTGCATGTGGCCAGCATTATAGAATGCTCCAGGCCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR GCA 90 bp ATATACAGATATGTACACGATAAGTTCACAGTTGAAAGAACCATTTGCCAGAAGTCTCCCGGGCAGCTTTaGTGGCAGGGGATGTTGCGA +
Preference number: 4 (lower is better)
Translates to: IYRYVHDKFTVERTICQKSPGQL*WQGMLR
Trigger: TCGCAACATCCCCTGCCAGCAAAGCTGCCCGGGAGA...CTTCTGGCAAATGGTTCTTTCAACTGTGAACTTATCGTGTACATATCTGTATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR GCA 90 bp GGGACTGGTTGCAGAAGAATCCAGAGGGAAGTCAGCAGGTTGAAGAATAGGAAACATCCCAGCTCTGCTTaGCATTTACTTCTATTTTGC +
Preference number: 4 (lower is better)
Translates to: GTGCRRIQREVSRLKNRKHPSSA*HLLLFC
Trigger: GCAAAATAGAAGTAAATGGCAAGCAGAGCTGGGATG...TTTCCTATTCTTCAACCTGCTGACTTCCCTCTGGATTCTTCTGCAACCAGTCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR GCA 90 bp AAATGGCACAATATCTGGGACTGGTTGCAGAAGAATCCAGAGGGAAGTCAGCAGCATCCCAGCTCTGCTTaGCATTTACTTCTATTTTGC +
Preference number: 4 (lower is better)
Translates to: KWHNIWDWLQKNPEGSQQHPSSA*HLLLFC
Trigger: GCAAAATAGAAGTAAATGGCAAGCAGAGCTGGGATG...CTGCTGACTTCCCTCTGGATTCTTCTGCAACCAGTCCCAGATATTGTGCCATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR GCA 90 bp GGGACTGGTTGCAGAAGAATCCAGAGGGAAGTCAGCAGGTTGAAGAATAGGAAATCTCCATCCCAGCTCTaGTTGCCATTTACTTCTATT +
Preference number: 4 (lower is better)
Translates to: GTGCRRIQREVSRLKNRKSPSQL*LPFTSI
Trigger: AATAGAAGTAAATGGCAAGCAGAGCTGGGATGGAGA...TTTCCTATTCTTCAACCTGCTGACTTCCCTCTGGATTCTTCTGCAACCAGTCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR GCA 90 bp ATGTTTGAACTATTTGGCCAGGGAATCCTACCAGTGAGTGATTTCCCTGGGGGCTTGCAGAAGTGCTTCTaGAACATCATTCTCAAGGAA +
Preference number: 4 (lower is better)
Translates to: MFELFGQGILPVSDFPGGLQKCF*NIILKE
Trigger: TTCCTTGAGAATGATGTTGCAGAAGCACTTCTGCAA...GCCCCCAGGGAAATCACTCACTGGTAGGATTCCCTGGCCAAATAGTTCAAACAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR GCA 90 bp GTACAACCATGGATAAAATGGCACAATATCTGGGACTGGTTGCAGAAGAATCCAGCCTCCTCAGACTCTTaGAGAAGTGCTTCTGCAACA +
Preference number: 4 (lower is better)
Translates to: VQPWIKWHNIWDWLQKNPASSDS*RSASAT
Trigger: TGTTGCAGAAGCACTTCTGCAAGAGTCTGAGGAGGC...TGGATTCTTCTGCAACCAGTCCCAGATATTGTGCCATTTTATCCATGGTTGTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
CDS-3UTR GCA 90 bp GATATGTACACGATAAGTTCACAGTTGAAAGAACCATTTGCCAGAAGCCTGGCAGCCTCCTCAGACTCTTaGAGAAGTGCTTCTGCAACA +
Preference number: 4 (lower is better)
Translates to: DMYTISSQLKEPFARSLAASSDS*RSASAT
Trigger: TGTTGCAGAAGCACTTCTGCAAGAGTCTGAGGAGGC...TGCCAGGCTTCTGGCAAATGGTTCTTTCAACTGTGAACTTATCGTGTACATATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR GCA 90 bp GATAAAATGGCACAATATCTGGGACTGGTTGCAGAAGAATCCAGAGGGAAGTCAAGCCTCTTGACCAGCTaGTTTGTGATGTTTCCTTCC +
Preference number: 4 (lower is better)
Translates to: DKMAQYLGLVAEESRGKSSLLTS*FVMFPS
Trigger: GGAAGGAAACATCACAAAGCAGCTGGTCAAGAGGCT...TGACTTCCCTCTGGATTCTTCTGCAACCAGTCCCAGATATTGTGCCATTTTATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR GCA 90 bp TGCAGAAGAATCCAGAGGGAAGTCAGCAGGTTGAAGAATAGGAAACAAGATTGGAGCCTCTTGACCAGCTaGTTTGTGATGTTTCCTTCC +
Preference number: 4 (lower is better)
Translates to: CRRIQREVSRLKNRKQDWSLLTS*FVMFPS
Trigger: GGAAGGAAACATCACAAAGCAGCTGGTCAAGAGGCT...CCAATCTTGTTTCCTATTCTTCAACCTGCTGACTTCCCTCTGGATTCTTCTGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR GCA 90 bp ATTACACTCACATATATTGTTTTGATACCTTGGCATACCCCACCTTGTACACTCGGCCATTGGCACCTCTaGAGATGTGAGCCTCTTGAC +
Preference number: 4 (lower is better)
Translates to: ITLTYIVLIPWHTPPCTLGHWHL*RCEPLD
Trigger: GTCAAGAGGCTCACATCTGCAGAGGTGCCAATGGCC...GAGTGTACAAGGTGGGGTATGCCAAGGTATCAAAACAATATATGTGAGTGTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR GCA 90 bp CTCCACTCCTACTCCATTAGGATTTCTCTGACTTCTAGGTTCCTCCACCTCAAACATCTAGAAAGGATCTaGAGCCTTCAGATTCTCCAC +
Preference number: 4 (lower is better)
Translates to: LHSYSIRISLTSRFLHLKHLERI*SLQILH
Trigger: GTGGAGAATCTGAAGGCTGCAGATCCTTTCTAGATG...TTTGAGGTGGAGGAACCTAGAAGTCAGAGAAATCCTAATGGAGTAGGAGTGGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR GCA 90 bp GATATGTACACGATAAGTTCACAGTTGAAAGAACCATTTGCCAGAAGCCTGGCATTAAACTGGAAGACCTaGTGCGGCTTACTGCTGGCT +
Preference number: 4 (lower is better)
Translates to: DMYTISSQLKEPFARSLALNWKT*CGLLLA
Trigger: AGCCAGCAGTAAGCCGCAGCAGGTCTTCCAGTTTAA...TGCCAGGCTTCTGGCAAATGGTTCTTTCAACTGTGAACTTATCGTGTACATATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR GCA 90 bp ATTACACTCACATATATTGTTTTGATACCTTGGCATACCCCACCTTGTACACTCGTGCAGTACTGGAGGTaGCTGACGATGGTGATGTCC +
Preference number: 4 (lower is better)
Translates to: ITLTYIVLIPWHTPPCTLVQYWR*LTMVMS
Trigger: GGACATCACCATCGTCAGGCACCTCCAGTACTGCAC...GAGTGTACAAGGTGGGGTATGCCAAGGTATCAAAACAATATATGTGAGTGTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR GCA 90 bp GATAAGTTCACAGTTGAAAGAACCATTTGCCAGAAGCCTGGCAAACAATTTGCAAGACACCAACAGGGCTaGAGCACTTGGTCCAGAATG +
Preference number: 4 (lower is better)
Translates to: DKFTVERTICQKPGKQFARHQQG*STWSRM
Trigger: CATTCTGGACCAAGTGCTGCAGCCCTGTTGGTGTCT...TGCAAATTGTTTGCCAGGCTTCTGGCAAATGGTTCTTTCAACTGTGAACTTATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR GCA 90 bp CATTTTTATTTCAGTTGTCGTGTCTCTCAGGCTCTAAACAATTTCCAGCCCAAACAGAGCCAGGCAAGCTaGTTTCTGGAGCTGGAGGTT +
Preference number: 4 (lower is better)
Translates to: HFYFSCRVSQALNNFQPKQSQAS*FLELEV
Trigger: AACCTCCAGCTCCAGAAAGCAGCTTGCCTGGCTCTG...TTTGGGCTGGAAATTGTTTAGAGCCTGAGAGACACGACAACTGAAATAAAAATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR GCA 90 bp GGGACTGGTTGCAGAAGAATCCAGAGGGAAGTCAGCAGGTTGAAGAATAGGAAAACAAATCGGTATGTTTaGAGAGTGTCGACAATTGCC +
Preference number: 4 (lower is better)
Translates to: GTGCRRIQREVSRLKNRKTNRYV*RVSTIA
Trigger: GGCAATTGTCGACACTCTGCAAACATACCGATTTGT...TTTCCTATTCTTCAACCTGCTGACTTCCCTCTGGATTCTTCTGCAACCAGTCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378023.8
ENST00000540914.5
CDS-3UTR GCA 90 bp AAGTGGCAATGTCTTCGGTGTTTTACAAAAGGCGCTAGCTATCTAAGGCATCTGAAATATTCAAGAGGATaGTGGGGTGGGTCGAATGGG +
Preference number: 4 (lower is better)
Translates to: KWQCLRCFTKGASYLRHLKYSRG*WGGSNG
Trigger: CCCATTCGACCCACCCCAGCATCCTCTTGAATATTT...CAGATGCCTTAGATAGCTAGCGCCTTTTGTAAAACACCGAAGACATTGCCACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000510784.8
ENST00000540914.5
CDS-3UTR GCA 90 bp GAGCATTCTATAATGCTGGCCACATGCAGAAACATTACAAGCAAAACAATGCCACTTCCTCTGGAGCTCTaGCTCAAAGGGAACAAGTCC +
Preference number: 4 (lower is better)
Translates to: EHSIMLATCRNITSKTMPLPLEL*LKGNKS
Trigger: GGACTTGTTCCCTTTGAGGCAGAGCTCCAGAGGAAG...TGGCATTGTTTTGCTTGTAATGTTTCTGCATGTGGCCAGCATTATAGAATGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR GCA 90 bp GATAAGTTCACAGTTGAAAGAACCATTTGCCAGAAGCCTGGCAAACAATTTGCATGCAAAAAGTGCGCGTaGCCCTTTCGCTCAGCAACT +
Preference number: 4 (lower is better)
Translates to: DKFTVERTICQKPGKQFACKKCA*PFRSAT
Trigger: AGTTGCTGAGCGAAAGGGGCACGCGCACTTTTTGCA...TGCAAATTGTTTGCCAGGCTTCTGGCAAATGGTTCTTTCAACTGTGAACTTATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000538035.6
CDS-3UTR CCA 90 bp CTCCACTCCTACTCCATTAGGATTTCTCTGACTTCTAGGTTCCTCCACCTCAAAAAACCCGCAAAGGACTaGCTTCTAATGATCCCATTG +
Preference number: 4 (lower is better)
Translates to: LHSYSIRISLTSRFLHLKKPAKD*LLMIPL
Trigger: CAATGGGATCATTAGAAGCCAGTCCTTTGCGGGTTT...TTTGAGGTGGAGGAACCTAGAAGTCAGAGAAATCCTAATGGAGTAGGAGTGGAG
46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CCA 90 bp GTGATTTCCCTGGGGGCAGTAACCACCCCTCAGGATGTCCTTCTTTCTAATCCCGGATTGTTGTTTTTGTaGCCTAAATTGTGCATTTTC +
Preference number: 4 (lower is better)
Translates to: VISLGAVTTPQDVLLSNPGLLFL*PKLCIF
Trigger: GAAAATGCACAATTTAGGCCACAAAAACAACAATCC...GGGATTAGAAAGAAGGACATCCTGAGGGGTGGTTACTGCCCCCAGGGAAATCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CCA 90 bp GGCATCATGGGAGCAATCCCATTCTCTGGCCTGGAGCATTCTATAATGCTGGCCGGATTGTTGTTTTTGTaGCCTAAATTGTGCATTTTC +
Preference number: 4 (lower is better)
Translates to: GIMGAIPFSGLEHSIMLAGLLFL*PKLCIF
Trigger: GAAAATGCACAATTTAGGCCACAAAAACAACAATCC...GGCCAGCATTATAGAATGCTCCAGGCCAGAGAATGGGATTGCTCCCATGATGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR CCA 90 bp GGCCATGAGTTGATCACTGAGGAGGTTGAGGGATGGGCACACTGGGATCCATTAGGATTGTTGTTTTTGTaGCCTAAATTGTGCATTTTC +
Preference number: 4 (lower is better)
Translates to: GHELITEEVEGWAHWDPLGLLFL*PKLCIF
Trigger: GAAAATGCACAATTTAGGCCACAAAAACAACAATCC...TAATGGATCCCAGTGTGCCCATCCCTCAACCTCCTCAGTGATCAACTCATGGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR CCA 90 bp CATTTTTATTTCAGTTGTCGTGTCTCTCAGGCTCTAAACAATTTCCAGCCCAAATTGCTGGCACCATCCTaGAGGCGTCGCTGGATACAA +
Preference number: 4 (lower is better)
Translates to: HFYFSCRVSQALNNFQPKLLAPS*RRRWIQ
Trigger: TTGTATCCAGCGACGCCTCCAGGATGGTGCCAGCAA...TTTGGGCTGGAAATTGTTTAGAGCCTGAGAGACACGACAACTGAAATAAAAATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CCA 90 bp GAGCATTCTATAATGCTGGCCACATGCAGAAACATTACAAGCAAAACAATGCCACTTGCTTCATTTTGCTaGCACCATCCTGGAGGCGTC +
Preference number: 4 (lower is better)
Translates to: EHSIMLATCRNITSKTMPLASFC*HHPGGV
Trigger: GACGCCTCCAGGATGGTGCCAGCAAAATGAAGCAAG...TGGCATTGTTTTGCTTGTAATGTTTCTGCATGTGGCCAGCATTATAGAATGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR CCA 90 bp AAATGGCACAATATCTGGGACTGGTTGCAGAAGAATCCAGAGGGAAGTCAGCAGCTAGCTCCACTTCAATaGTGCACATATTCTCTGTGT +
Preference number: 4 (lower is better)
Translates to: KWHNIWDWLQKNPEGSQQLAPLQ*CTYSLC
Trigger: ACACAGAGAATATGTGCACCATTGAAGTGGAGCTAG...CTGCTGACTTCCCTCTGGATTCTTCTGCAACCAGTCCCAGATATTGTGCCATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR CCA 90 bp GGGGTGGGTCGAATGGGACAAATTCTGCAAGTTAGAAGCACTAAATGTCCTCCACTAGCTCCACTTCAATaGTGCACATATTCTCTGTGT +
Preference number: 4 (lower is better)
Translates to: GVGRMGQILQVRSTKCPPLAPLQ*CTYSLC
Trigger: ACACAGAGAATATGTGCACCATTGAAGTGGAGCTAG...TGGAGGACATTTAGTGCTTCTAACTTGCAGAATTTGTCCCATTCGACCCACCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR CCA 90 bp GTACAACCATGGATAAAATGGCACAATATCTGGGACTGGTTGCAGAAGAATCCACTGCAAACAGCTCTTTaGTCTCACAGGTCACGCTAC +
Preference number: 4 (lower is better)
Translates to: VQPWIKWHNIWDWLQKNPLQTAL*SHRSRY
Trigger: GTAGCGTGACCTGTGAGACCAAAGAGCTGTTTGCAG...TGGATTCTTCTGCAACCAGTCCCAGATATTGTGCCATTTTATCCATGGTTGTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
CDS-3UTR CCA 90 bp GATATGTACACGATAAGTTCACAGTTGAAAGAACCATTTGCCAGAAGCCTGGCACTGCAAACAGCTCTTTaGTCTCACAGGTCACGCTAC +
Preference number: 4 (lower is better)
Translates to: DMYTISSQLKEPFARSLALQTAL*SHRSRY
Trigger: GTAGCGTGACCTGTGAGACCAAAGAGCTGTTTGCAG...TGCCAGGCTTCTGGCAAATGGTTCTTTCAACTGTGAACTTATCGTGTACATATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CCA 90 bp GATATGTACACGATAAGTTCACAGTTGAAAGAACCATTTGCCAGAAGCCTGGCATACCCTGGCTGTACATaGACATTCTCCTCTGAAGGG +
Preference number: 4 (lower is better)
Translates to: DMYTISSQLKEPFARSLAYPGCT*TFSSEG
Trigger: CCCTTCAGAGGAGAATGTCCATGTACAGCCAGGGTA...TGCCAGGCTTCTGGCAAATGGTTCTTTCAACTGTGAACTTATCGTGTACATATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CCA 90 bp GATAAGTTCACAGTTGAAAGAACCATTTGCCAGAAGCCTGGCAAACAATTTGCAGTTTCCGGGGTACCCTaGCTGTACATGGACATTCTC +
Preference number: 4 (lower is better)
Translates to: DKFTVERTICQKPGKQFAVSGVP*LYMDIL
Trigger: GAGAATGTCCATGTACAGCCAGGGTACCCCGGAAAC...TGCAAATTGTTTGCCAGGCTTCTGGCAAATGGTTCTTTCAACTGTGAACTTATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CCA 90 bp GCATTCTATAATGCTGGCCACATGCAGAAACATTACAAGCAAAACAATGCCAGTGTTTCCGGGGTACCCTaGCTGTACATGGACATTCTC +
Preference number: 4 (lower is better)
Translates to: AFYNAGHMQKHYKQNNASVSGVP*LYMDIL
Trigger: GAGAATGTCCATGTACAGCCAGGGTACCCCGGAAAC...ACTGGCATTGTTTTGCTTGTAATGTTTCTGCATGTGGCCAGCATTATAGAATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR CCA 90 bp ATATTCAAGAGGATGCTGGGGTGGGTCGAATGGGACAAATTCTGCAAGTTAGAACACCTAAAGAAGGAGTaGTCTTTGAAGGTGGGCGTT +
Preference number: 4 (lower is better)
Translates to: IFKRMLGWVEWDKFCKLEHLKKE*SLKVGV
Trigger: AACGCCCACCTTCAAAGACCACTCCTTCTTTAGGTG...TTCTAACTTGCAGAATTTGTCCCATTCGACCCACCCCAGCATCCTCTTGAATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644411.1
CDS-3UTR CCA 90 bp ATTACACTCACATATATTGTTTTGATACCTTGGCATACCCCACCTTGTACACTCGAAGCTGAGCGACAGTaGCATTTTCTCCTCGGCTGC +
Preference number: 4 (lower is better)
Translates to: ITLTYIVLIPWHTPPCTLEAERQ*HFLLGC
Trigger: GCAGCCGAGGAGAAAATGCCACTGTCGCTCAGCTTC...GAGTGTACAAGGTGGGGTATGCCAAGGTATCAAAACAATATATGTGAGTGTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CCA 90 bp TCTGGCCTGGAGCATTCTATAATGCTGGCCACATGCAGAAACATTACAAGCAAACTGGATTTGTTGAGTTaGAAGGGGAGCCTGTTGAGT +
Preference number: 4 (lower is better)
Translates to: SGLEHSIMLATCRNITSKLDLLS*KGSLLS
Trigger: ACTCAACAGGCTCCCCTTCCAACTCAACAAATCCAG...TTTGCTTGTAATGTTTCTGCATGTGGCCAGCATTATAGAATGCTCCAGGCCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR CCA 90 bp TGGATAAAATGGCACAATATCTGGGACTGGTTGCAGAAGAATCCAGAGGGAAGTCTGGATTTGTTGAGTTaGAAGGGGAGCCTGTTGAGT +
Preference number: 4 (lower is better)
Translates to: WIKWHNIWDWLQKNPEGSLDLLS*KGSLLS
Trigger: ACTCAACAGGCTCCCCTTCCAACTCAACAAATCCAG...ACTTCCCTCTGGATTCTTCTGCAACCAGTCCCAGATATTGTGCCATTTTATCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR CCA 90 bp ATTACACTCACATATATTGTTTTGATACCTTGGCATACCCCACCTTGTACACTCTCCATACCCTCATTCTaGGAGGCCAAGCTGCTGAGG +
Preference number: 4 (lower is better)
Translates to: ITLTYIVLIPWHTPPCTLSIPSF*EAKLLR
Trigger: CCTCAGCAGCTTGGCCTCCCAGAATGAGGGTATGGA...GAGTGTACAAGGTGGGGTATGCCAAGGTATCAAAACAATATATGTGAGTGTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CCA 90 bp ATAAAATGGCACAATATCTGGGACTGGTTGCAGAAGAATCCAGAGGGAAGTCAGTGGAAGATGCTGAGCTaGTGTCATCCATACCCTCAT +
Preference number: 4 (lower is better)
Translates to: IKWHNIWDWLQKNPEGSQWKMLS*CHPYPH
Trigger: ATGAGGGTATGGATGACACCAGCTCAGCATCTTCCA...CTGACTTCCCTCTGGATTCTTCTGCAACCAGTCCCAGATATTGTGCCATTTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR CCA 90 bp GCATTCTATAATGCTGGCCACATGCAGAAACATTACAAGCAAAACAATGCCAGTTTTTCTGGGCTCCTCTaGGTCTTCCTCCTTCAGGTG +
Preference number: 4 (lower is better)
Translates to: AFYNAGHMQKHYKQNNASFSGLL*VFLLQV
Trigger: CACCTGAAGGAGGAAGACCCAGAGGAGCCCAGAAAA...ACTGGCATTGTTTTGCTTGTAATGTTTCTGCATGTGGCCAGCATTATAGAATGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR CCA 90 bp TTTCAACCATTTAACATAAGCTATAGGCTATACCTCCTAACTACAGACTGTACAGCGGCAAGCCTCAGATaGGGCCGAGGCAGGTTTTCT +
Preference number: 4 (lower is better)
Translates to: FQPFNISYRLYLLTTDCTAASLR*GRGRFS
Trigger: AGAAAACCTGCCTCGGCCCCATCTGAGGCTTGCCGC...TGTACAGTCTGTAGTTAGGAGGTATAGCCTATAGCTTATGTTAAATGGTTGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CCA 90 bp CATTTTTATTTCAGTTGTCGTGTCTCTCAGGCTCTAAACAATTTCCAGCCCAAAAGTTGGGTGCAGTACTaGAGGTGCCTGACGATGGTG +
Preference number: 4 (lower is better)
Translates to: HFYFSCRVSQALNNFQPKSWVQY*RCLTMV
Trigger: CACCATCGTCAGGCACCTCCAGTACTGCACCCAACT...TTTGGGCTGGAAATTGTTTAGAGCCTGAGAGACACGACAACTGAAATAAAAATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CCA 90 bp ATTACACTCACATATATTGTTTTGATACCTTGGCATACCCCACCTTGTACACTCAGTTGGGTGCAGTACTaGAGGTGCCTGACGATGGTG +
Preference number: 4 (lower is better)
Translates to: ITLTYIVLIPWHTPPCTLSWVQY*RCLTMV
Trigger: CACCATCGTCAGGCACCTCCAGTACTGCACCCAACT...GAGTGTACAAGGTGGGGTATGCCAAGGTATCAAAACAATATATGTGAGTGTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CCA 90 bp GATAAGTTCACAGTTGAAAGAACCATTTGCCAGAAGCCTGGCAAACAATTTGCAATTTGCTGCACGAGTTaGGTGCAGTACTGGAGGTGC +
Preference number: 4 (lower is better)
Translates to: DKFTVERTICQKPGKQFAICCTS*VQYWRC
Trigger: GCACCTCCAGTACTGCACCCAACTCGTGCAGCAAAT...TGCAAATTGTTTGCCAGGCTTCTGGCAAATGGTTCTTTCAACTGTGAACTTATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CCA 90 bp GAACTATTTGGCCAGGGAATCCTACCAGTGAGTGATTTCCCTGGGGGCAGTAACCTTTTTGTGAAATTCTaGTATGGCTTCCACAACAGA +
Preference number: 4 (lower is better)
Translates to: ELFGQGILPVSDFPGGSNLFVKF*YGFHNR
Trigger: TCTGTTGTGGAAGCCATACCAGAATTTCACAAAAAG...GTTACTGCCCCCAGGGAAATCACTCACTGGTAGGATTCCCTGGCCAAATAGTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CCA 90 bp GATAAGTTCACAGTTGAAAGAACCATTTGCCAGAAGCCTGGCAAACAATTTGCACAGTTCTGGCAAAGCTaGCCTCCAGCTGCTTCATCA +
Preference number: 4 (lower is better)
Translates to: DKFTVERTICQKPGKQFAQFWQS*PPAASS
Trigger: TGATGAAGCAGCTGGAGGCCAGCTTTGCCAGAACTG...TGCAAATTGTTTGCCAGGCTTCTGGCAAATGGTTCTTTCAACTGTGAACTTATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CCA 90 bp GATAAGTTCACAGTTGAAAGAACCATTTGCCAGAAGCCTGGCAAACAATTTGCACAGTCTGGAGTGCAGTaGGGCAATTATGGCTCACTG +
Preference number: 4 (lower is better)
Translates to: DKFTVERTICQKPGKQFAQSGVQ*GNYGSL
Trigger: CAGTGAGCCATAATTGCCCCACTGCACTCCAGACTG...TGCAAATTGTTTGCCAGGCTTCTGGCAAATGGTTCTTTCAACTGTGAACTTATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CCA 90 bp GAACTATTTGGCCAGGGAATCCTACCAGTGAGTGATTTCCCTGGGGGCAGTAACAGACTCCAGAGTAGCTaGGAGCACATAAAATTAAAA +
Preference number: 4 (lower is better)
Translates to: ELFGQGILPVSDFPGGSNRLQSS*EHIKLK
Trigger: TTTTAATTTTATGTGCTCCCAGCTACTCTGGAGTCT...GTTACTGCCCCCAGGGAAATCACTCACTGGTAGGATTCCCTGGCCAAATAGTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CCA 90 bp ATGTTTGAACTATTTGGCCAGGGAATCCTACCAGTGAGTGATTTCCCTGGGGGCATTGTTTTGATACCTTaGCATACCCCACCTTGTACA +
Preference number: 4 (lower is better)
Translates to: MFELFGQGILPVSDFPGGIVLIP*HTPPCT
Trigger: TGTACAAGGTGGGGTATGCCAAGGTATCAAAACAAT...GCCCCCAGGGAAATCACTCACTGGTAGGATTCCCTGGCCAAATAGTTCAAACAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CCA 90 bp TGCAGAAGAATCCAGAGGGAAGTCAGCAGGTTGAAGAATAGGAAACAAGATTGGAGGAGAGAGCAGCCCTaGAGTTTGTATGCATTCTTG +
Preference number: 4 (lower is better)
Translates to: CRRIQREVSRLKNRKQDWRREQP*SLYAFL
Trigger: CAAGAATGCATACAAACTCCAGGGCTGCTCTCTCCT...CCAATCTTGTTTCCTATTCTTCAACCTGCTGACTTCCCTCTGGATTCTTCTGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378023.8
ENST00000540914.5
CDS-3UTR CCA 90 bp AAATGGCACAATATCTGGGACTGGTTGCAGAAGAATCCAGAGGGAAGTCAGCAGTTTGAAAAGAAGGAGTaGTCTTTGAAGGTGGGCGTT +
Preference number: 4 (lower is better)
Translates to: KWHNIWDWLQKNPEGSQQFEKKE*SLKVGV
Trigger: AACGCCCACCTTCAAAGACCACTCCTTCTTTTCAAA...CTGCTGACTTCCCTCTGGATTCTTCTGCAACCAGTCCCAGATATTGTGCCATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR CCA 90 bp AAAATGGCACAATATCTGGGACTGGTTGCAGAAGAATCCAGAGGGAAGTCAGCATGGCACAAAAGCACATaGGAAAACGTCTTTCGGTCT +
Preference number: 4 (lower is better)
Translates to: KMAQYLGLVAEESRGKSAWHKST*ENVFRS
Trigger: AGACCGAAAGACGTTTTCCCATGTGCTTTTGTGCCA...TGCTGACTTCCCTCTGGATTCTTCTGCAACCAGTCCCAGATATTGTGCCATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000510784.8
ENST00000540914.5
CDS-3UTR CCA 90 bp AAATGGCACAATATCTGGGACTGGTTGCAGAAGAATCCAGAGGGAAGTCAGCAGAGCAATCCCATTCTCTaGCCTGGAGCATTCTATAAT +
Preference number: 4 (lower is better)
Translates to: KWHNIWDWLQKNPEGSQQSNPIL*PGAFYN
Trigger: ATTATAGAATGCTCCAGGCCAGAGAATGGGATTGCT...CTGCTGACTTCCCTCTGGATTCTTCTGCAACCAGTCCCAGATATTGTGCCATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510784.8
ENST00000540914.5
3UTR CAA 72 bp CAACCATGGATAAAATGGCACAATATCTGGGACTGGTaGCAGAAGAATCCAGAGGGAAGTCAGCAGGTTGAA +
Preference number: 4 (lower is better)
Translates to: QPWIKWHNIWDW*QKNPEGSQQVE
Trigger: TTCAACCTGCTGACTTCCCTCTGGATTCTTCTGCAACCAGTCCCAGATATTGTGCCATTTTATCCATGGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
CDS-3UTR TCA 90 bp TGCAGAAGAATCCAGAGGGAAGTCAGCAGGTTGAAGAATAGGAAACAAGATTGGCGGAGGAATTTTCAATaGAGGAGTTACACCTGGATC +
Preference number: 4 (lower is better)
Translates to: CRRIQREVSRLKNRKQDWRRNFQ*RSYTWI
Trigger: GATCCAGGTGTAACTCCTTCATTGAAAATTCCTCCG...CCAATCTTGTTTCCTATTCTTCAACCTGCTGACTTCCCTCTGGATTCTTCTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR TCA 90 bp GAGCATTCTATAATGCTGGCCACATGCAGAAACATTACAAGCAAAACAATGCCATGGCCTGAGGCTTCTTaGGAGCGGAGGAATTTTCAA +
Preference number: 4 (lower is better)
Translates to: EHSIMLATCRNITSKTMPWPEAS*ERRNFQ
Trigger: TTGAAAATTCCTCCGCTCTCAAGAAGCCTCAGGCCA...TGGCATTGTTTTGCTTGTAATGTTTCTGCATGTGGCCAGCATTATAGAATGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR TCA 90 bp CATTTTTATTTCAGTTGTCGTGTCTCTCAGGCTCTAAACAATTTCCAGCCCAAATTCTTCAGTTTGGCCTaGGGCTTCTTGAGAGCGGAG +
Preference number: 4 (lower is better)
Translates to: HFYFSCRVSQALNNFQPKFFSLA*GFLRAE
Trigger: CTCCGCTCTCAAGAAGCCTCAGGCCAAACTGAAGAA...TTTGGGCTGGAAATTGTTTAGAGCCTGAGAGACACGACAACTGAAATAAAAATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR TCA 90 bp AAATGGCACAATATCTGGGACTGGTTGCAGAAGAATCCAGAGGGAAGTCAGCAGTTCATATCTTTTAACTaGGCTGTCAACTTGTCCAGC +
Preference number: 4 (lower is better)
Translates to: KWHNIWDWLQKNPEGSQQFISFN*AVNLSS
Trigger: GCTGGACAAGTTGACAGCTCAGTTAAAAGATATGAA...CTGCTGACTTCCCTCTGGATTCTTCTGCAACCAGTCCCAGATATTGTGCCATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR TCA 90 bp CTCCACTCCTACTCCATTAGGATTTCTCTGACTTCTAGGTTCCTCCACCTCAAATCTACCTTACTTATATaGAACTCCAGGCGTCTCATG +
Preference number: 4 (lower is better)
Translates to: LHSYSIRISLTSRFLHLKSTLLI*NSRRLM
Trigger: CATGAGACGCCTGGAGTTTCATATAAGTAAGGTAGA...TTTGAGGTGGAGGAACCTAGAAGTCAGAGAAATCCTAATGGAGTAGGAGTGGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR TCA 90 bp AAAATGGCACAATATCTGGGACTGGTTGCAGAAGAATCCAGAGGGAAGTCAGCATCTACCTTACTTATATaGAACTCCAGGCGTCTCATG +
Preference number: 4 (lower is better)
Translates to: KMAQYLGLVAEESRGKSASTLLI*NSRRLM
Trigger: CATGAGACGCCTGGAGTTTCATATAAGTAAGGTAGA...TGCTGACTTCCCTCTGGATTCTTCTGCAACCAGTCCCAGATATTGTGCCATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR TCA 90 bp ATTCAAGAGGATGCTGGGGTGGGTCGAATGGGACAAATTCTGCAAGTTAGAAGCATGAAAATTTCATATTaGTCTCCAGGACAGAGGCGT +
Preference number: 4 (lower is better)
Translates to: IQEDAGVGRMGQILQVRSMKISY*SPGQRR
Trigger: ACGCCTCTGTCCTGGAGATCAATATGAAATTTTCAT...GCTTCTAACTTGCAGAATTTGTCCCATTCGACCCACCCCAGCATCCTCTTGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR TCA 90 bp ACAATATCTGGGACTGGTTGCAGAAGAATCCAGAGGGAAGTCAGCAGGTTGAAGGCCGGCCATACTTCATaGAAATTTCATATTGATCTC +
Preference number: 4 (lower is better)
Translates to: TISGTGCRRIQREVSRLKAGHTS*KFHIDL
Trigger: GAGATCAATATGAAATTTTCATGAAGTATGGCCGGC...CTTCAACCTGCTGACTTCCCTCTGGATTCTTCTGCAACCAGTCCCAGATATTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR TCA 90 bp ATTACACTCACATATATTGTTTTGATACCTTGGCATACCCCACCTTGTACACTCCTACCTACCAGGATGTaGGTTGCTAGCCCTTTGAGC +
Preference number: 4 (lower is better)
Translates to: ITLTYIVLIPWHTPPCTLLPTRM*VASPLS
Trigger: GCTCAAAGGGCTAGCAACTCACATCCTGGTAGGTAG...GAGTGTACAAGGTGGGGTATGCCAAGGTATCAAAACAATATATGTGAGTGTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR TCA 90 bp CATTTTTATTTCAGTTGTCGTGTCTCTCAGGCTCTAAACAATTTCCAGCCCAAACTACCTACCAGGATGTaGGTTGCTAGCCCTTTGAGC +
Preference number: 4 (lower is better)
Translates to: HFYFSCRVSQALNNFQPKLPTRM*VASPLS
Trigger: GCTCAAAGGGCTAGCAACTCACATCCTGGTAGGTAG...TTTGGGCTGGAAATTGTTTAGAGCCTGAGAGACACGACAACTGAAATAAAAATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR TCA 90 bp ATTACACTCACATATATTGTTTTGATACCTTGGCATACCCCACCTTGTACACTCATGGACATTCTCCTCTaGAGGGCTGCTGCCTTGTTC +
Preference number: 4 (lower is better)
Translates to: ITLTYIVLIPWHTPPCTLMDILL*RAAALF
Trigger: GAACAAGGCAGCAGCCCTTCAGAGGAGAATGTCCAT...GAGTGTACAAGGTGGGGTATGCCAAGGTATCAAAACAATATATGTGAGTGTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR TCA 90 bp ATATACAGATATGTACACGATAAGTTCACAGTTGAAAGAACCATTTGCCAGAAGAGAAGGAGTGGTCTTTaGAGGTGGGCGTTTCCGGGG +
Preference number: 4 (lower is better)
Translates to: IYRYVHDKFTVERTICQKRRSGL*RWAFPG
Trigger: CCCCGGAAACGCCCACCTTCAAAGACCACTCCTTCT...CTTCTGGCAAATGGTTCTTTCAACTGTGAACTTATCGTGTACATATCTGTATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR TCA 90 bp TTTCAACCATTTAACATAAGCTATAGGCTATACCTCCTAACTACAGACTGTACAAGAAGGAGTGGTCTTTaGAGGTGGGCGTTTCCGGGG +
Preference number: 4 (lower is better)
Translates to: FQPFNISYRLYLLTTDCTRRSGL*RWAFPG
Trigger: CCCCGGAAACGCCCACCTTCAAAGACCACTCCTTCT...TGTACAGTCTGTAGTTAGGAGGTATAGCCTATAGCTTATGTTAAATGGTTGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR TCA 90 bp ACAATATCTGGGACTGGTTGCAGAAGAATCCAGAGGGAAGTCAGCAGGTTGAAGTCTTGGTTCAGATCCTaGAACTCTTTATACTGCTCT +
Preference number: 4 (lower is better)
Translates to: TISGTGCRRIQREVSRLKSWFRS*NSLYCS
Trigger: AGAGCAGTATAAAGAGTTTCAGGATCTGAACCAAGA...CTTCAACCTGCTGACTTCCCTCTGGATTCTTCTGCAACCAGTCCCAGATATTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR TCA 90 bp ATTCAAGAGGATGCTGGGGTGGGTCGAATGGGACAAATTCTGCAAGTTAGAAGCTCTTGGTTCAGATCCTaGAACTCTTTATACTGCTCT +
Preference number: 4 (lower is better)
Translates to: IQEDAGVGRMGQILQVRSSWFRS*NSLYCS
Trigger: AGAGCAGTATAAAGAGTTTCAGGATCTGAACCAAGA...GCTTCTAACTTGCAGAATTTGTCCCATTCGACCCACCCCAGCATCCTCTTGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR TCA 90 bp GATATGTACACGATAAGTTCACAGTTGAAAGAACCATTTGCCAGAAGCCTGGCACTATGTTCTCATCACTaGCAGCTGCGAGTTTCTCCA +
Preference number: 4 (lower is better)
Translates to: DMYTISSQLKEPFARSLALCSHH*QLRVSP
Trigger: TGGAGAAACTCGCAGCTGTCAGTGATGAGAACATAG...TGCCAGGCTTCTGGCAAATGGTTCTTTCAACTGTGAACTTATCGTGTACATATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR TCA 90 bp GATAAGTTCACAGTTGAAAGAACCATTTGCCAGAAGCCTGGCAAACAATTTGCAAATACTGGAAAACAGTaGCGACTTCCGAGGACAGGC +
Preference number: 4 (lower is better)
Translates to: DKFTVERTICQKPGKQFANTGKQ*RLPRTG
Trigger: GCCTGTCCTCGGAAGTCGTCACTGTTTTCCAGTATT...TGCAAATTGTTTGCCAGGCTTCTGGCAAATGGTTCTTTCAACTGTGAACTTATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR TCA 90 bp AAAATGGCACAATATCTGGGACTGGTTGCAGAAGAATCCAGAGGGAAGTCAGCAGGGAAGTCAGCAGGTTaGAGAATAGGAAACAAGATT +
Preference number: 4 (lower is better)
Translates to: KMAQYLGLVAEESRGKSAGKSAG*RIGNKI
Trigger: AATCTTGTTTCCTATTCTTCAACCTGCTGACTTCCC...TGCTGACTTCCCTCTGGATTCTTCTGCAACCAGTCCCAGATATTGTGCCATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR TCA 90 bp AAACCATGTCAACCACAAAGCCTTGGGAAACAGAACTGCTATATCCCTCTGCCTGGGAAGTCAGCAGGTTaGAGAATAGGAAACAAGATT +
Preference number: 4 (lower is better)
Translates to: KPCQPQSLGKQNCYIPLPGKSAG*RIGNKI
Trigger: AATCTTGTTTCCTATTCTTCAACCTGCTGACTTCCC...AGGCAGAGGGATATAGCAGTTCTGTTTCCCAAGGCTTTGTGGTTGACATGGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510784.8
ENST00000540914.5
CDS-3UTR GCA 90 bp GATATGTACACGATAAGTTCACAGTTGAAAGAACCATTTGCCAGAAGCCTGGCAGATGTTGCGAAGGCTTaGTTCATTTTGCTGGCACCA +
Preference number: 4 (lower is better)
Translates to: DMYTISSQLKEPFARSLADVAKA*FILLAP
Trigger: TGGTGCCAGCAAAATGAAGCAAGCCTTCGCAACATC...TGCCAGGCTTCTGGCAAATGGTTCTTTCAACTGTGAACTTATCGTGTACATATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR GCA 90 bp GTACAACCATGGATAAAATGGCACAATATCTGGGACTGGTTGCAGAAGAATCCAGATGTTGCGAAGGCTTaGTTCATTTTGCTGGCACCA +
Preference number: 4 (lower is better)
Translates to: VQPWIKWHNIWDWLQKNPDVAKA*FILLAP
Trigger: TGGTGCCAGCAAAATGAAGCAAGCCTTCGCAACATC...TGGATTCTTCTGCAACCAGTCCCAGATATTGTGCCATTTTATCCATGGTTGTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
CDS-3UTR GCA 90 bp GTACAACCATGGATAAAATGGCACAATATCTGGGACTGGTTGCAGAAGAATCCATTCAGTTTCCACCGCTaGCGGCCATACTTCATGAAA +
Preference number: 4 (lower is better)
Translates to: VQPWIKWHNIWDWLQKNPFSFHR*RPYFMK
Trigger: TTTCATGAAGTATGGCCGGCAGCGGTGGAAACTGAA...TGGATTCTTCTGCAACCAGTCCCAGATATTGTGCCATTTTATCCATGGTTGTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
CDS-3UTR GCA 90 bp CTCCACTCCTACTCCATTAGGATTTCTCTGACTTCTAGGTTCCTCCACCTCAAACATCCCAGCTCTGCTTaGCATTTACTTCTATTTTGC +
Preference number: 4 (lower is better)
Translates to: LHSYSIRISLTSRFLHLKHPSSA*HLLLFC
Trigger: GCAAAATAGAAGTAAATGGCAAGCAGAGCTGGGATG...TTTGAGGTGGAGGAACCTAGAAGTCAGAGAAATCCTAATGGAGTAGGAGTGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR GCA 90 bp AAATGGCACAATATCTGGGACTGGTTGCAGAAGAATCCAGAGGGAAGTCAGCAGTTGCAGAAGTGCTTCTaGAACATCATTCTCAAGGAA +
Preference number: 4 (lower is better)
Translates to: KWHNIWDWLQKNPEGSQQLQKCF*NIILKE
Trigger: TTCCTTGAGAATGATGTTGCAGAAGCACTTCTGCAA...CTGCTGACTTCCCTCTGGATTCTTCTGCAACCAGTCCCAGATATTGTGCCATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR GCA 90 bp ATTCAAGAGGATGCTGGGGTGGGTCGAATGGGACAAATTCTGCAAGTTAGAAGCTTGCAGAAGTGCTTCTaGAACATCATTCTCAAGGAA +
Preference number: 4 (lower is better)
Translates to: IQEDAGVGRMGQILQVRSLQKCF*NIILKE
Trigger: TTCCTTGAGAATGATGTTGCAGAAGCACTTCTGCAA...GCTTCTAACTTGCAGAATTTGTCCCATTCGACCCACCCCAGCATCCTCTTGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR GCA 90 bp GATAAGTTCACAGTTGAAAGAACCATTTGCCAGAAGCCTGGCAAACAATTTGCAGCCTCCTCAGACTCTTaGAGAAGTGCTTCTGCAACA +
Preference number: 4 (lower is better)
Translates to: DKFTVERTICQKPGKQFAASSDS*RSASAT
Trigger: TGTTGCAGAAGCACTTCTGCAAGAGTCTGAGGAGGC...TGCAAATTGTTTGCCAGGCTTCTGGCAAATGGTTCTTTCAACTGTGAACTTATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR GCA 90 bp TGCAGAAGAATCCAGAGGGAAGTCAGCAGGTTGAAGAATAGGAAACAAGATTGGCATCTAGAAAGGATCTaGAGCCTTCAGATTCTCCAC +
Preference number: 4 (lower is better)
Translates to: CRRIQREVSRLKNRKQDWHLERI*SLQILH
Trigger: GTGGAGAATCTGAAGGCTGCAGATCCTTTCTAGATG...CCAATCTTGTTTCCTATTCTTCAACCTGCTGACTTCCCTCTGGATTCTTCTGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR GCA 90 bp GATAAGTTCACAGTTGAAAGAACCATTTGCCAGAAGCCTGGCAAACAATTTGCATTAAACTGGAAGACCTaGTGCGGCTTACTGCTGGCT +
Preference number: 4 (lower is better)
Translates to: DKFTVERTICQKPGKQFALNWKT*CGLLLA
Trigger: AGCCAGCAGTAAGCCGCAGCAGGTCTTCCAGTTTAA...TGCAAATTGTTTGCCAGGCTTCTGGCAAATGGTTCTTTCAACTGTGAACTTATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR GCA 90 bp ATATACAGATATGTACACGATAAGTTCACAGTTGAAAGAACCATTTGCCAGAAGTGTCCAGGCTCTCGTTaGCTGTGGTCAGTGGGAGAG +
Preference number: 4 (lower is better)
Translates to: IYRYVHDKFTVERTICQKCPGSR*LWSVGE
Trigger: CTCTCCCACTGACCACAGGCAACGAGAGCCTGGACA...CTTCTGGCAAATGGTTCTTTCAACTGTGAACTTATCGTGTACATATCTGTATAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR GCA 90 bp ATATACAGATATGTACACGATAAGTTCACAGTTGAAAGAACCATTTGCCAGAAGGTCCTGAGTACTTCCTaGTGGGCCAGGAGGTTGCTG +
Preference number: 4 (lower is better)
Translates to: IYRYVHDKFTVERTICQKVLSTS*WARRLL
Trigger: CAGCAACCTCCTGGCCCAGCAGGAAGTACTCAGGAC...CTTCTGGCAAATGGTTCTTTCAACTGTGAACTTATCGTGTACATATCTGTATAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR GCA 90 bp GATATGTACACGATAAGTTCACAGTTGAAAGAACCATTTGCCAGAAGCCTGGCAATTTTTGGAGGCTGCTaGCAAGTAAAGCGTCACAGC +
Preference number: 4 (lower is better)
Translates to: DMYTISSQLKEPFARSLAIFGGC*QVKRHS
Trigger: GCTGTGACGCTTTACTTGGCAGCAGCCTCCAAAAAT...TGCCAGGCTTCTGGCAAATGGTTCTTTCAACTGTGAACTTATCGTGTACATATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR GCA 90 bp GATAAGTTCACAGTTGAAAGAACCATTTGCCAGAAGCCTGGCAAACAATTTGCAGTCCAATTGTTCATATaGCAGCCGCCCATCTTCTCC +
Preference number: 4 (lower is better)
Translates to: DKFTVERTICQKPGKQFAVQLFI*QPPIFS
Trigger: GGAGAAGATGGGCGGCTGGCATATGAACAATTGGAC...TGCAAATTGTTTGCCAGGCTTCTGGCAAATGGTTCTTTCAACTGTGAACTTATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR GCA 90 bp GATAAGTTCACAGTTGAAAGAACCATTTGCCAGAAGCCTGGCAAACAATTTGCAGCAATTATGGCTCACTaGAGCCTGAATCTTCTGGGC +
Preference number: 4 (lower is better)
Translates to: DKFTVERTICQKPGKQFAAIMAH*SLNLLG
Trigger: GCCCAGAAGATTCAGGCTGCAGTGAGCCATAATTGC...TGCAAATTGTTTGCCAGGCTTCTGGCAAATGGTTCTTTCAACTGTGAACTTATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR GCA 90 bp TGCAGAAGAATCCAGAGGGAAGTCAGCAGGTTGAAGAATAGGAAACAAGATTGGCTTGGGAAACAGAACTaGTATATCCCTCTGCCTAGT +
Preference number: 4 (lower is better)
Translates to: CRRIQREVSRLKNRKQDWLGKQN*YIPLPS
Trigger: ACTAGGCAGAGGGATATAGCAGTTCTGTTTCCCAAG...CCAATCTTGTTTCCTATTCTTCAACCTGCTGACTTCCCTCTGGATTCTTCTGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510784.8
ENST00000540914.5
CDS-3UTR GCA 90 bp GATAAGTTCACAGTTGAAAGAACCATTTGCCAGAAGCCTGGCAAACAATTTGCAGGCATCCTTCAGTTCTaGTTGCAAAAAGTGCGCGTG +
Preference number: 4 (lower is better)
Translates to: DKFTVERTICQKPGKQFAGILQF*LQKVRV
Trigger: CACGCGCACTTTTTGCAAGCAGAACTGAAGGATGCC...TGCAAATTGTTTGCCAGGCTTCTGGCAAATGGTTCTTTCAACTGTGAACTTATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000538035.6
CDS-3UTR GCA 90 bp TTTCAACCATTTAACATAAGCTATAGGCTATACCTCCTAACTACAGACTGTACATTCCTTTCCTTGGGTTaGCCAAGCCCTCTGGAGGGC +
Preference number: 4 (lower is better)
Translates to: FQPFNISYRLYLLTTDCTFLSLG*PSPLEG
Trigger: GCCCTCCAGAGGGCTTGGGCAACCCAAGGAAAGGAA...TGTACAGTCTGTAGTTAGGAGGTATAGCCTATAGCTTATGTTAAATGGTTGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613507.4
CDS-3UTR CCA 90 bp TGCAGAAGAATCCAGAGGGAAGTCAGCAGGTTGAAGAATAGGAAACAAGATTGGAAACCCGCAAAGGACTaGCTTCTAATGATCCCATTG +
Preference number: 4 (lower is better)
Translates to: CRRIQREVSRLKNRKQDWKPAKD*LLMIPL
Trigger: CAATGGGATCATTAGAAGCCAGTCCTTTGCGGGTTT...CCAATCTTGTTTCCTATTCTTCAACCTGCTGACTTCCCTCTGGATTCTTCTGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR CCA 90 bp GATAAAATGGCACAATATCTGGGACTGGTTGCAGAAGAATCCAGAGGGAAGTCAAAACCCGCAAAGGACTaGCTTCTAATGATCCCATTG +
Preference number: 4 (lower is better)
Translates to: DKMAQYLGLVAEESRGKSKPAKD*LLMIPL
Trigger: CAATGGGATCATTAGAAGCCAGTCCTTTGCGGGTTT...TGACTTCCCTCTGGATTCTTCTGCAACCAGTCCCAGATATTGTGCCATTTTATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR CCA 90 bp TGGATAAAATGGCACAATATCTGGGACTGGTTGCAGAAGAATCCAGAGGGAAGTAAACCCGCAAAGGACTaGCTTCTAATGATCCCATTG +
Preference number: 4 (lower is better)
Translates to: WIKWHNIWDWLQKNPEGSKPAKD*LLMIPL
Trigger: CAATGGGATCATTAGAAGCCAGTCCTTTGCGGGTTT...ACTTCCCTCTGGATTCTTCTGCAACCAGTCCCAGATATTGTGCCATTTTATCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR CCA 90 bp GAACTATTTGGCCAGGGAATCCTACCAGTGAGTGATTTCCCTGGGGGCAGTAACGGATTGTTGTTTTTGTaGCCTAAATTGTGCATTTTC +
Preference number: 4 (lower is better)
Translates to: ELFGQGILPVSDFPGGSNGLLFL*PKLCIF
Trigger: GAAAATGCACAATTTAGGCCACAAAAACAACAATCC...GTTACTGCCCCCAGGGAAATCACTCACTGGTAGGATTCCCTGGCCAAATAGTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CCA 90 bp CATTTTTATTTCAGTTGTCGTGTCTCTCAGGCTCTAAACAATTTCCAGCCCAAACTTGCTTCATTTTGCTaGCACCATCCTGGAGGCGTC +
Preference number: 4 (lower is better)
Translates to: HFYFSCRVSQALNNFQPKLASFC*HHPGGV
Trigger: GACGCCTCCAGGATGGTGCCAGCAAAATGAAGCAAG...TTTGGGCTGGAAATTGTTTAGAGCCTGAGAGACACGACAACTGAAATAAAAATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CCA 90 bp CTCCACTCCTACTCCATTAGGATTTCTCTGACTTCTAGGTTCCTCCACCTCAAACTAGCTCCACTTCAATaGTGCACATATTCTCTGTGT +
Preference number: 4 (lower is better)
Translates to: LHSYSIRISLTSRFLHLKLAPLQ*CTYSLC
Trigger: ACACAGAGAATATGTGCACCATTGAAGTGGAGCTAG...TTTGAGGTGGAGGAACCTAGAAGTCAGAGAAATCCTAATGGAGTAGGAGTGGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CCA 90 bp GAGCATTCTATAATGCTGGCCACATGCAGAAACATTACAAGCAAAACAATGCCACTGCAAACAGCTCTTTaGTCTCACAGGTCACGCTAC +
Preference number: 4 (lower is better)
Translates to: EHSIMLATCRNITSKTMPLQTAL*SHRSRY
Trigger: GTAGCGTGACCTGTGAGACCAAAGAGCTGTTTGCAG...TGGCATTGTTTTGCTTGTAATGTTTCTGCATGTGGCCAGCATTATAGAATGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR CCA 90 bp GATAAGTTCACAGTTGAAAGAACCATTTGCCAGAAGCCTGGCAAACAATTTGCACTGCAAACAGCTCTTTaGTCTCACAGGTCACGCTAC +
Preference number: 4 (lower is better)
Translates to: DKFTVERTICQKPGKQFALQTAL*SHRSRY
Trigger: GTAGCGTGACCTGTGAGACCAAAGAGCTGTTTGCAG...TGCAAATTGTTTGCCAGGCTTCTGGCAAATGGTTCTTTCAACTGTGAACTTATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CCA 90 bp GAGCATTCTATAATGCTGGCCACATGCAGAAACATTACAAGCAAAACAATGCCATACCCTGGCTGTACATaGACATTCTCCTCTGAAGGG +
Preference number: 4 (lower is better)
Translates to: EHSIMLATCRNITSKTMPYPGCT*TFSSEG
Trigger: CCCTTCAGAGGAGAATGTCCATGTACAGCCAGGGTA...TGGCATTGTTTTGCTTGTAATGTTTCTGCATGTGGCCAGCATTATAGAATGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR CCA 90 bp CATTTTTATTTCAGTTGTCGTGTCTCTCAGGCTCTAAACAATTTCCAGCCCAAAGTTTCCGGGGTACCCTaGCTGTACATGGACATTCTC +
Preference number: 4 (lower is better)
Translates to: HFYFSCRVSQALNNFQPKVSGVP*LYMDIL
Trigger: GAGAATGTCCATGTACAGCCAGGGTACCCCGGAAAC...TTTGGGCTGGAAATTGTTTAGAGCCTGAGAGACACGACAACTGAAATAAAAATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CCA 90 bp GTACAACCATGGATAAAATGGCACAATATCTGGGACTGGTTGCAGAAGAATCCATGGAAGATGCTGAGCTaGTGTCATCCATACCCTCAT +
Preference number: 4 (lower is better)
Translates to: VQPWIKWHNIWDWLQKNPWKMLS*CHPYPH
Trigger: ATGAGGGTATGGATGACACCAGCTCAGCATCTTCCA...TGGATTCTTCTGCAACCAGTCCCAGATATTGTGCCATTTTATCCATGGTTGTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
CDS-3UTR CCA 90 bp ATTACACTCACATATATTGTTTTGATACCTTGGCATACCCCACCTTGTACACTCGACTTCCTGCCACACTaGTCCCAACTCCTGTGTCTT +
Preference number: 4 (lower is better)
Translates to: ITLTYIVLIPWHTPPCTLDFLPH*SQLLCL
Trigger: AAGACACAGGAGTTGGGACCAGTGTGGCAGGAAGTC...GAGTGTACAAGGTGGGGTATGCCAAGGTATCAAAACAATATATGTGAGTGTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CCA 90 bp ATATACAGATATGTACACGATAAGTTCACAGTTGAAAGAACCATTTGCCAGAAGGTTGCCTGTGGTCAGTaGGAGAGGACTTCCTGCCAC +
Preference number: 4 (lower is better)
Translates to: IYRYVHDKFTVERTICQKVACGQ*ERTSCH
Trigger: GTGGCAGGAAGTCCTCTCCCACTGACCACAGGCAAC...CTTCTGGCAAATGGTTCTTTCAACTGTGAACTTATCGTGTACATATCTGTATAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CCA 90 bp TTTCAACCATTTAACATAAGCTATAGGCTATACCTCCTAACTACAGACTGTACAGGCTCTCGTTGCCTGTaGTCAGTGGGAGAGGACTTC +
Preference number: 4 (lower is better)
Translates to: FQPFNISYRLYLLTTDCTGSRCL*SVGEDF
Trigger: GAAGTCCTCTCCCACTGACCACAGGCAACGAGAGCC...TGTACAGTCTGTAGTTAGGAGGTATAGCCTATAGCTTATGTTAAATGGTTGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CCA 90 bp ATATACAGATATGTACACGATAAGTTCACAGTTGAAAGAACCATTTGCCAGAAGGGCTCTCGTTGCCTGTaGTCAGTGGGAGAGGACTTC +
Preference number: 4 (lower is better)
Translates to: IYRYVHDKFTVERTICQKGSRCL*SVGEDF
Trigger: GAAGTCCTCTCCCACTGACCACAGGCAACGAGAGCC...CTTCTGGCAAATGGTTCTTTCAACTGTGAACTTATCGTGTACATATCTGTATAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CCA 90 bp CTCCACTCCTACTCCATTAGGATTTCTCTGACTTCTAGGTTCCTCCACCTCAAATGGGTCTGCAAGTCCTaGATATTCTTTGTTGACAGT +
Preference number: 4 (lower is better)
Translates to: LHSYSIRISLTSRFLHLKWVCKS*IFFVDS
Trigger: ACTGTCAACAAAGAATATCCAGGACTTGCAGACCCA...TTTGAGGTGGAGGAACCTAGAAGTCAGAGAAATCCTAATGGAGTAGGAGTGGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CCA 90 bp GATATGTACACGATAAGTTCACAGTTGAAAGAACCATTTGCCAGAAGCCTGGCAAGGCAAGCTGCTTTCTaGAGCTGGAGGTTTGTCTTT +
Preference number: 4 (lower is better)
Translates to: DMYTISSQLKEPFARSLARQAAF*SWRFVF
Trigger: AAAGACAAACCTCCAGCTCCAGAAAGCAGCTTGCCT...TGCCAGGCTTCTGGCAAATGGTTCTTTCAACTGTGAACTTATCGTGTACATATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CCA 90 bp CTCCACTCCTACTCCATTAGGATTTCTCTGACTTCTAGGTTCCTCCACCTCAAACATTTGCCAGAAGCCTaGCAAACAATTTGCACTTTG +
Preference number: 4 (lower is better)
Translates to: LHSYSIRISLTSRFLHLKHLPEA*QTICTL
Trigger: CAAAGTGCAAATTGTTTGCCAGGCTTCTGGCAAATG...TTTGAGGTGGAGGAACCTAGAAGTCAGAGAAATCCTAATGGAGTAGGAGTGGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CCA 90 bp GCATTCTATAATGCTGGCCACATGCAGAAACATTACAAGCAAAACAATGCCAGTTATTCAAGAGGATGCTaGGGTGGGTCGAATGGGACA +
Preference number: 4 (lower is better)
Translates to: AFYNAGHMQKHYKQNNASYSRGC*GGSNGT
Trigger: TGTCCCATTCGACCCACCCCAGCATCCTCTTGAATA...ACTGGCATTGTTTTGCTTGTAATGTTTCTGCATGTGGCCAGCATTATAGAATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR CCA 90 bp CATTTTTATTTCAGTTGTCGTGTCTCTCAGGCTCTAAACAATTTCCAGCCCAAAGTGATTTCCTTTCCTTaGGTTGCCCAAGCCCTCTGG +
Preference number: 4 (lower is better)
Translates to: HFYFSCRVSQALNNFQPKVISFP*VAQALW
Trigger: CCAGAGGGCTTGGGCAACCCAAGGAAAGGAAATCAC...TTTGGGCTGGAAATTGTTTAGAGCCTGAGAGACACGACAACTGAAATAAAAATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000613507.4
CDS-3UTR TCA 90 bp CATTTTTATTTCAGTTGTCGTGTCTCTCAGGCTCTAAACAATTTCCAGCCCAAATGGCCTGAGGCTTCTTaGGAGCGGAGGAATTTTCAA +
Preference number: 4 (lower is better)
Translates to: HFYFSCRVSQALNNFQPKWPEAS*ERRNFQ
Trigger: TTGAAAATTCCTCCGCTCTCAAGAAGCCTCAGGCCA...TTTGGGCTGGAAATTGTTTAGAGCCTGAGAGACACGACAACTGAAATAAAAATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR TCA 90 bp TGCAGAAGAATCCAGAGGGAAGTCAGCAGGTTGAAGAATAGGAAACAAGATTGGTCTACCTTACTTATATaGAACTCCAGGCGTCTCATG +
Preference number: 4 (lower is better)
Translates to: CRRIQREVSRLKNRKQDWSTLLI*NSRRLM
Trigger: CATGAGACGCCTGGAGTTTCATATAAGTAAGGTAGA...CCAATCTTGTTTCCTATTCTTCAACCTGCTGACTTCCCTCTGGATTCTTCTGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR TCA 90 bp GATAAGTTCACAGTTGAAAGAACCATTTGCCAGAAGCCTGGCAAACAATTTGCACCAGACCTTTCATCTTaGTGGAGAATTCTCCCAGCA +
Preference number: 4 (lower is better)
Translates to: DKFTVERTICQKPGKQFAPDLSS*WRILPA
Trigger: TGCTGGGAGAATTCTCCATCAAGATGAAAGGTCTGG...TGCAAATTGTTTGCCAGGCTTCTGGCAAATGGTTCTTTCAACTGTGAACTTATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR TCA 90 bp CTCCACTCCTACTCCATTAGGATTTCTCTGACTTCTAGGTTCCTCCACCTCAAAATGAAAATTTCATATTaGTCTCCAGGACAGAGGCGT +
Preference number: 4 (lower is better)
Translates to: LHSYSIRISLTSRFLHLKMKISY*SPGQRR
Trigger: ACGCCTCTGTCCTGGAGATCAATATGAAATTTTCAT...TTTGAGGTGGAGGAACCTAGAAGTCAGAGAAATCCTAATGGAGTAGGAGTGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR TCA 90 bp GATATGTACACGATAAGTTCACAGTTGAAAGAACCATTTGCCAGAAGCCTGGCAAATTTCTGGATTTGTTaGGTTGGAAGGGGAGCCTGT +
Preference number: 4 (lower is better)
Translates to: DMYTISSQLKEPFARSLANFWIC*VGRGAC
Trigger: ACAGGCTCCCCTTCCAACTCAACAAATCCAGAAATT...TGCCAGGCTTCTGGCAAATGGTTCTTTCAACTGTGAACTTATCGTGTACATATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR TCA 90 bp CTCCACTCCTACTCCATTAGGATTTCTCTGACTTCTAGGTTCCTCCACCTCAAATCTTGGTTCAGATCCTaGAACTCTTTATACTGCTCT +
Preference number: 4 (lower is better)
Translates to: LHSYSIRISLTSRFLHLKSWFRS*NSLYCS
Trigger: AGAGCAGTATAAAGAGTTTCAGGATCTGAACCAAGA...TTTGAGGTGGAGGAACCTAGAAGTCAGAGAAATCCTAATGGAGTAGGAGTGGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR TCA 90 bp TCCAAATATTCAAGAGGATGCTGGGGTGGGTCGAATGGGACAAATTCTGCAAGTTCTTGGTTCAGATCCTaGAACTCTTTATACTGCTCT +
Preference number: 4 (lower is better)
Translates to: SKYSRGCWGGSNGTNSASSWFRS*NSLYCS
Trigger: AGAGCAGTATAAAGAGTTTCAGGATCTGAACCAAGA...ACTTGCAGAATTTGTCCCATTCGACCCACCCCAGCATCCTCTTGAATATTTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR TCA 90 bp CTCCACTCCTACTCCATTAGGATTTCTCTGACTTCTAGGTTCCTCCACCTCAAAAAAGACAGCTTTTTGTaGAATTCTGGTATGGCTTCC +
Preference number: 4 (lower is better)
Translates to: LHSYSIRISLTSRFLHLKKDSFL*NSGMAS
Trigger: GGAAGCCATACCAGAATTTCACAAAAAGCTGTCTTT...TTTGAGGTGGAGGAACCTAGAAGTCAGAGAAATCCTAATGGAGTAGGAGTGGAG
43% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR TCA 90 bp GATATGTACACGATAAGTTCACAGTTGAAAGAACCATTTGCCAGAAGCCTGGCACTGGATATTCTTTGTTaGCAGTTCTGGCAAAGCTGG +
Preference number: 4 (lower is better)
Translates to: DMYTISSQLKEPFARSLALDILC*QFWQSW
Trigger: CCAGCTTTGCCAGAACTGTCAACAAAGAATATCCAG...TGCCAGGCTTCTGGCAAATGGTTCTTTCAACTGTGAACTTATCGTGTACATATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR TCA 90 bp ATTACACTCACATATATTGTTTTGATACCTTGGCATACCCCACCTTGTACACTCAATACTGGAAAACAGTaGCGACTTCCGAGGACAGGC +
Preference number: 4 (lower is better)
Translates to: ITLTYIVLIPWHTPPCTLNTGKQ*RLPRTG
Trigger: GCCTGTCCTCGGAAGTCGTCACTGTTTTCCAGTATT...GAGTGTACAAGGTGGGGTATGCCAAGGTATCAAAACAATATATGTGAGTGTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR TCA 90 bp ATATACAGATATGTACACGATAAGTTCACAGTTGAAAGAACCATTTGCCAGAAGAACCTCTGCCTCAAGTaGTCCTCCCACCTCAGACTC +
Preference number: 4 (lower is better)
Translates to: IYRYVHDKFTVERTICQKNLCLK*SSHLRL
Trigger: GAGTCTGAGGTGGGAGGATCACTTGAGGCAGAGGTT...CTTCTGGCAAATGGTTCTTTCAACTGTGAACTTATCGTGTACATATCTGTATAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR TCA 90 bp CTCCACTCCTACTCCATTAGGATTTCTCTGACTTCTAGGTTCCTCCACCTCAAATCACATATATTGTTTTaGTACCTTGGCATACCCCAC +
Preference number: 4 (lower is better)
Translates to: LHSYSIRISLTSRFLHLKSHILF*YLGIPH
Trigger: GTGGGGTATGCCAAGGTATCAAAACAATATATGTGA...TTTGAGGTGGAGGAACCTAGAAGTCAGAGAAATCCTAATGGAGTAGGAGTGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR TCA 90 bp GATAAAATGGCACAATATCTGGGACTGGTTGCAGAAGAATCCAGAGGGAAGTCAGGGAAGTCAGCAGGTTaGAGAATAGGAAACAAGATT +
Preference number: 4 (lower is better)
Translates to: DKMAQYLGLVAEESRGKSGKSAG*RIGNKI
Trigger: AATCTTGTTTCCTATTCTTCAACCTGCTGACTTCCC...TGACTTCCCTCTGGATTCTTCTGCAACCAGTCCCAGATATTGTGCCATTTTATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR TCA 90 bp GATAAGTTCACAGTTGAAAGAACCATTTGCCAGAAGCCTGGCAAACAATTTGCACTTCCGCATCTGCCCTaGAGAAAGCAGTTTCATTCA +
Preference number: 4 (lower is better)
Translates to: DKFTVERTICQKPGKQFALPHLP*RKQFHS
Trigger: TGAATGAAACTGCTTTCTTCAGGGCAGATGCGGAAG...TGCAAATTGTTTGCCAGGCTTCTGGCAAATGGTTCTTTCAACTGTGAACTTATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613507.4
CDS-3UTR GCA 90 bp GAGCATTCTATAATGCTGGCCACATGCAGAAACATTACAAGCAAAACAATGCCAGATGTTGCGAAGGCTTaGTTCATTTTGCTGGCACCA +
Preference number: 4 (lower is better)
Translates to: EHSIMLATCRNITSKTMPDVAKA*FILLAP
Trigger: TGGTGCCAGCAAAATGAAGCAAGCCTTCGCAACATC...TGGCATTGTTTTGCTTGTAATGTTTCTGCATGTGGCCAGCATTATAGAATGCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR GCA 90 bp GCATTCTATAATGCTGGCCACATGCAGAAACATTACAAGCAAAACAATGCCAGTTTCAGTTTCCACCGCTaGCGGCCATACTTCATGAAA +
Preference number: 4 (lower is better)
Translates to: AFYNAGHMQKHYKQNNASFSFHR*RPYFMK
Trigger: TTTCATGAAGTATGGCCGGCAGCGGTGGAAACTGAA...ACTGGCATTGTTTTGCTTGTAATGTTTCTGCATGTGGCCAGCATTATAGAATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR GCA 90 bp GATAAAATGGCACAATATCTGGGACTGGTTGCAGAAGAATCCAGAGGGAAGTCACATCCCAGCTCTGCTTaGCATTTACTTCTATTTTGC +
Preference number: 4 (lower is better)
Translates to: DKMAQYLGLVAEESRGKSHPSSA*HLLLFC
Trigger: GCAAAATAGAAGTAAATGGCAAGCAGAGCTGGGATG...TGACTTCCCTCTGGATTCTTCTGCAACCAGTCCCAGATATTGTGCCATTTTATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR GCA 90 bp TGCAGAAGAATCCAGAGGGAAGTCAGCAGGTTGAAGAATAGGAAACAAGATTGGTCTCCATCCCAGCTCTaGTTGCCATTTACTTCTATT +
Preference number: 4 (lower is better)
Translates to: CRRIQREVSRLKNRKQDWSPSQL*LPFTSI
Trigger: AATAGAAGTAAATGGCAAGCAGAGCTGGGATGGAGA...CCAATCTTGTTTCCTATTCTTCAACCTGCTGACTTCCCTCTGGATTCTTCTGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR GCA 90 bp ATTACACTCACATATATTGTTTTGATACCTTGGCATACCCCACCTTGTACACTCTTGTCTGGGGAAGGATaGAGCCACCTAAAGAAGGAG +
Preference number: 4 (lower is better)
Translates to: ITLTYIVLIPWHTPPCTLLSGEG*SHLKKE
Trigger: CTCCTTCTTTAGGTGGCTGCATCCTTCCCCAGACAA...GAGTGTACAAGGTGGGGTATGCCAAGGTATCAAAACAATATATGTGAGTGTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000259698.9
ENST00000613507.4
CDS-3UTR GCA 90 bp GATATGTACACGATAAGTTCACAGTTGAAAGAACCATTTGCCAGAAGCCTGGCAGCAAAGAAAGTGTCTTaGAAGGCACTCAAGACAGAC +
Preference number: 4 (lower is better)
Translates to: DMYTISSQLKEPFARSLAAKKVS*KALKTD
Trigger: GTCTGTCTTGAGTGCCTTGCAAGACACTTTCTTTGC...TGCCAGGCTTCTGGCAAATGGTTCTTTCAACTGTGAACTTATCGTGTACATATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259698.9
ENST00000613507.4
CDS-3UTR GCA 90 bp TTTCAACCATTTAACATAAGCTATAGGCTATACCTCCTAACTACAGACTGTACATTCTCAAGGAACAGGTaGTCAGCCCCAGCACCTGAG +
Preference number: 4 (lower is better)
Translates to: FQPFNISYRLYLLTTDCTFSRNR*SAPAPE
Trigger: CTCAGGTGCTGGGGCTGAGCACCTGTTCCTTGAGAA...TGTACAGTCTGTAGTTAGGAGGTATAGCCTATAGCTTATGTTAAATGGTTGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR GCA 90 bp GATAAGTTCACAGTTGAAAGAACCATTTGCCAGAAGCCTGGCAAACAATTTGCAAGCCTCTTGACCAGCTaGTTTGTGATGTTTCCTTCC +
Preference number: 4 (lower is better)
Translates to: DKFTVERTICQKPGKQFASLLTS*FVMFPS
Trigger: GGAAGGAAACATCACAAAGCAGCTGGTCAAGAGGCT...TGCAAATTGTTTGCCAGGCTTCTGGCAAATGGTTCTTTCAACTGTGAACTTATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR GCA 90 bp GAGCATTCTATAATGCTGGCCACATGCAGAAACATTACAAGCAAAACAATGCCAAGCCTCTTGACCAGCTaGTTTGTGATGTTTCCTTCC +
Preference number: 4 (lower is better)
Translates to: EHSIMLATCRNITSKTMPSLLTS*FVMFPS
Trigger: GGAAGGAAACATCACAAAGCAGCTGGTCAAGAGGCT...TGGCATTGTTTTGCTTGTAATGTTTCTGCATGTGGCCAGCATTATAGAATGCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR GCA 90 bp GCATTCTATAATGCTGGCCACATGCAGAAACATTACAAGCAAAACAATGCCAGTAGCCTCTTGACCAGCTaGTTTGTGATGTTTCCTTCC +
Preference number: 4 (lower is better)
Translates to: AFYNAGHMQKHYKQNNASSLLTS*FVMFPS
Trigger: GGAAGGAAACATCACAAAGCAGCTGGTCAAGAGGCT...ACTGGCATTGTTTTGCTTGTAATGTTTCTGCATGTGGCCAGCATTATAGAATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR GCA 90 bp ATATACAGATATGTACACGATAAGTTCACAGTTGAAAGAACCATTTGCCAGAAGGGCCATTGGCACCTCTaGAGATGTGAGCCTCTTGAC +
Preference number: 4 (lower is better)
Translates to: IYRYVHDKFTVERTICQKGHWHL*RCEPLD
Trigger: GTCAAGAGGCTCACATCTGCAGAGGTGCCAATGGCC...CTTCTGGCAAATGGTTCTTTCAACTGTGAACTTATCGTGTACATATCTGTATAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR GCA 90 bp CTCCACTCCTACTCCATTAGGATTTCTCTGACTTCTAGGTTCCTCCACCTCAAAGGCTTACTGCTGGCTTaGATTTTAGAATATCATCCA +
Preference number: 4 (lower is better)
Translates to: LHSYSIRISLTSRFLHLKGLLLA*ILEYHP
Trigger: TGGATGATATTCTAAAATGCAAGCCAGCAGTAAGCC...TTTGAGGTGGAGGAACCTAGAAGTCAGAGAAATCCTAATGGAGTAGGAGTGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR GCA 90 bp ATATACAGATATGTACACGATAAGTTCACAGTTGAAAGAACCATTTGCCAGAAGAACTGGAAGACCTGCTaGGGCTTACTGCTGGCTTGC +
Preference number: 4 (lower is better)
Translates to: IYRYVHDKFTVERTICQKNWKTC*GLLLAC
Trigger: GCAAGCCAGCAGTAAGCCGCAGCAGGTCTTCCAGTT...CTTCTGGCAAATGGTTCTTTCAACTGTGAACTTATCGTGTACATATCTGTATAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR GCA 90 bp ATTACACTCACATATATTGTTTTGATACCTTGGCATACCCCACCTTGTACACTCTTAAACTGGAAGACCTaGTGCGGCTTACTGCTGGCT +
Preference number: 4 (lower is better)
Translates to: ITLTYIVLIPWHTPPCTLLNWKT*CGLLLA
Trigger: AGCCAGCAGTAAGCCGCAGCAGGTCTTCCAGTTTAA...GAGTGTACAAGGTGGGGTATGCCAAGGTATCAAAACAATATATGTGAGTGTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR GCA 90 bp GATATGTACACGATAAGTTCACAGTTGAAAGAACCATTTGCCAGAAGCCTGGCAGAGAAAACAATTTGCTaGACGAGTTGGGTGCAGTAC +
Preference number: 4 (lower is better)
Translates to: DMYTISSQLKEPFARSLAEKTIC*TSWVQY
Trigger: GTACTGCACCCAACTCGTGCAGCAAATTGTTTTCTC...TGCCAGGCTTCTGGCAAATGGTTCTTTCAACTGTGAACTTATCGTGTACATATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR GCA 90 bp TTTCAACCATTTAACATAAGCTATAGGCTATACCTCCTAACTACAGACTGTACACAGAGCCAGGCAAGCTaGTTTCTGGAGCTGGAGGTT +
Preference number: 4 (lower is better)
Translates to: FQPFNISYRLYLLTTDCTQSQAS*FLELEV
Trigger: AACCTCCAGCTCCAGAAAGCAGCTTGCCTGGCTCTG...TGTACAGTCTGTAGTTAGGAGGTATAGCCTATAGCTTATGTTAAATGGTTGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR GCA 90 bp GATAAGTTCACAGTTGAAAGAACCATTTGCCAGAAGCCTGGCAAACAATTTGCATCACATGGGCTGGAGTaGAGTAGTGTAATCTCAGCT +
Preference number: 4 (lower is better)
Translates to: DKFTVERTICQKPGKQFASHGLE*SSVISA
Trigger: AGCTGAGATTACACTACTGCACTCCAGCCCATGTGA...TGCAAATTGTTTGCCAGGCTTCTGGCAAATGGTTCTTTCAACTGTGAACTTATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR GCA 90 bp TCTGGCCTGGAGCATTCTATAATGCTGGCCACATGCAGAAACATTACAAGCAAATTACAAGCAAAACAATaGCAGTTGCTATGGGCACAG +
Preference number: 4 (lower is better)
Translates to: SGLEHSIMLATCRNITSKLQAKQ*QLLWAQ
Trigger: CTGTGCCCATAGCAACTGGCATTGTTTTGCTTGTAA...TTTGCTTGTAATGTTTCTGCATGTGGCCAGCATTATAGAATGCTCCAGGCCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR CCA 90 bp ATAAAATGGCACAATATCTGGGACTGGTTGCAGAAGAATCCAGAGGGAAGTCAGCTAGCTCCACTTCAATaGTGCACATATTCTCTGTGT +
Preference number: 4 (lower is better)
Translates to: IKWHNIWDWLQKNPEGSQLAPLQ*CTYSLC
Trigger: ACACAGAGAATATGTGCACCATTGAAGTGGAGCTAG...CTGACTTCCCTCTGGATTCTTCTGCAACCAGTCCCAGATATTGTGCCATTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR CCA 90 bp CATTTTTATTTCAGTTGTCGTGTCTCTCAGGCTCTAAACAATTTCCAGCCCAAACTGCAAACAGCTCTTTaGTCTCACAGGTCACGCTAC +
Preference number: 4 (lower is better)
Translates to: HFYFSCRVSQALNNFQPKLQTAL*SHRSRY
Trigger: GTAGCGTGACCTGTGAGACCAAAGAGCTGTTTGCAG...TTTGGGCTGGAAATTGTTTAGAGCCTGAGAGACACGACAACTGAAATAAAAATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CCA 90 bp CATTTTTATTTCAGTTGTCGTGTCTCTCAGGCTCTAAACAATTTCCAGCCCAAATACCCTGGCTGTACATaGACATTCTCCTCTGAAGGG +
Preference number: 4 (lower is better)
Translates to: HFYFSCRVSQALNNFQPKYPGCT*TFSSEG
Trigger: CCCTTCAGAGGAGAATGTCCATGTACAGCCAGGGTA...TTTGGGCTGGAAATTGTTTAGAGCCTGAGAGACACGACAACTGAAATAAAAATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CCA 90 bp TTTCAACCATTTAACATAAGCTATAGGCTATACCTCCTAACTACAGACTGTACAGAAGCTGAGCGACAGTaGCATTTTCTCCTCGGCTGC +
Preference number: 4 (lower is better)
Translates to: FQPFNISYRLYLLTTDCTEAERQ*HFLLGC
Trigger: GCAGCCGAGGAGAAAATGCCACTGTCGCTCAGCTTC...TGTACAGTCTGTAGTTAGGAGGTATAGCCTATAGCTTATGTTAAATGGTTGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CCA 90 bp ATATACAGATATGTACACGATAAGTTCACAGTTGAAAGAACCATTTGCCAGAAGTCCATACCCTCATTCTaGGAGGCCAAGCTGCTGAGG +
Preference number: 4 (lower is better)
Translates to: IYRYVHDKFTVERTICQKSIPSF*EAKLLR
Trigger: CCTCAGCAGCTTGGCCTCCCAGAATGAGGGTATGGA...CTTCTGGCAAATGGTTCTTTCAACTGTGAACTTATCGTGTACATATCTGTATAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CCA 90 bp GATAAGTTCACAGTTGAAAGAACCATTTGCCAGAAGCCTGGCAAACAATTTGCATGGAAGATGCTGAGCTaGTGTCATCCATACCCTCAT +
Preference number: 4 (lower is better)
Translates to: DKFTVERTICQKPGKQFAWKMLS*CHPYPH
Trigger: ATGAGGGTATGGATGACACCAGCTCAGCATCTTCCA...TGCAAATTGTTTGCCAGGCTTCTGGCAAATGGTTCTTTCAACTGTGAACTTATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CCA 90 bp ATATACAGATATGTACACGATAAGTTCACAGTTGAAAGAACCATTTGCCAGAAGCTCCCAGGGAGTTCCTaGAAGATGCTGAGCTGGTGT +
Preference number: 4 (lower is better)
Translates to: IYRYVHDKFTVERTICQKLPGSS*KMLSWC
Trigger: ACACCAGCTCAGCATCTTCCAGGAACTCCCTGGGAG...CTTCTGGCAAATGGTTCTTTCAACTGTGAACTTATCGTGTACATATCTGTATAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CCA 90 bp ATATACAGATATGTACACGATAAGTTCACAGTTGAAAGAACCATTTGCCAGAAGCCTGTCTGTGGCCATTaGCACCTCTGCAGATGTGAG +
Preference number: 4 (lower is better)
Translates to: IYRYVHDKFTVERTICQKPVCGH*HLCRCE
Trigger: CTCACATCTGCAGAGGTGCCAATGGCCACAGACAGG...CTTCTGGCAAATGGTTCTTTCAACTGTGAACTTATCGTGTACATATCTGTATAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CCA 90 bp TTTCAACCATTTAACATAAGCTATAGGCTATACCTCCTAACTACAGACTGTACAATGCCCCCTGGCTTCTaGGTGAACCGACCTGTAACT +
Preference number: 4 (lower is better)
Translates to: FQPFNISYRLYLLTTDCTMPPGF*VNRPVT
Trigger: AGTTACAGGTCGGTTCACCCAGAAGCCAGGGGGCAT...TGTACAGTCTGTAGTTAGGAGGTATAGCCTATAGCTTATGTTAAATGGTTGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CCA 90 bp ATATACAGATATGTACACGATAAGTTCACAGTTGAAAGAACCATTTGCCAGAAGAGTTGGGTGCAGTACTaGAGGTGCCTGACGATGGTG +
Preference number: 4 (lower is better)
Translates to: IYRYVHDKFTVERTICQKSWVQY*RCLTMV
Trigger: CACCATCGTCAGGCACCTCCAGTACTGCACCCAACT...CTTCTGGCAAATGGTTCTTTCAACTGTGAACTTATCGTGTACATATCTGTATAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CCA 90 bp ATATACAGATATGTACACGATAAGTTCACAGTTGAAAGAACCATTTGCCAGAAGCATCACTCTGTCCGCTaGGCTGTGGTAGACACCAAC +
Preference number: 4 (lower is better)
Translates to: IYRYVHDKFTVERTICQKHHSVR*AVVDTN
Trigger: GTTGGTGTCTACCACAGCCCAGCGGACAGAGTGATG...CTTCTGGCAAATGGTTCTTTCAACTGTGAACTTATCGTGTACATATCTGTATAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CCA 90 bp ATTACACTCACATATATTGTTTTGATACCTTGGCATACCCCACCTTGTACACTCCAGGGTTCGAAACACTaGGTCTGCAAGTCCTGGATA +
Preference number: 4 (lower is better)
Translates to: ITLTYIVLIPWHTPPCTLQGSKH*VCKSWI
Trigger: TATCCAGGACTTGCAGACCCAGTGTTTCGAACCCTG...GAGTGTACAAGGTGGGGTATGCCAAGGTATCAAAACAATATATGTGAGTGTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CCA 90 bp TTTCAACCATTTAACATAAGCTATAGGCTATACCTCCTAACTACAGACTGTACAGCCCGGTCCAGAATTTaGGACACCAGGGTTCGAAAC +
Preference number: 4 (lower is better)
Translates to: FQPFNISYRLYLLTTDCTARSRI*DTRVRN
Trigger: GTTTCGAACCCTGGTGTCCCAAATTCTGGACCGGGC...TGTACAGTCTGTAGTTAGGAGGTATAGCCTATAGCTTATGTTAAATGGTTGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CCA 90 bp GATAAGTTCACAGTTGAAAGAACCATTTGCCAGAAGCCTGGCAAACAATTTGCAAGGCAAGCTGCTTTCTaGAGCTGGAGGTTTGTCTTT +
Preference number: 4 (lower is better)
Translates to: DKFTVERTICQKPGKQFARQAAF*SWRFVF
Trigger: AAAGACAAACCTCCAGCTCCAGAAAGCAGCTTGCCT...TGCAAATTGTTTGCCAGGCTTCTGGCAAATGGTTCTTTCAACTGTGAACTTATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CCA 90 bp GATAAAATGGCACAATATCTGGGACTGGTTGCAGAAGAATCCAGAGGGAAGTCATTTGAAAAGAAGGAGTaGTCTTTGAAGGTGGGCGTT +
Preference number: 4 (lower is better)
Translates to: DKMAQYLGLVAEESRGKSFEKKE*SLKVGV
Trigger: AACGCCCACCTTCAAAGACCACTCCTTCTTTTCAAA...TGACTTCCCTCTGGATTCTTCTGCAACCAGTCCCAGATATTGTGCCATTTTATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR CCA 90 bp ATAAAATGGCACAATATCTGGGACTGGTTGCAGAAGAATCCAGAGGGAAGTCAGTTTGAAAAGAAGGAGTaGTCTTTGAAGGTGGGCGTT +
Preference number: 4 (lower is better)
Translates to: IKWHNIWDWLQKNPEGSQFEKKE*SLKVGV
Trigger: AACGCCCACCTTCAAAGACCACTCCTTCTTTTCAAA...CTGACTTCCCTCTGGATTCTTCTGCAACCAGTCCCAGATATTGTGCCATTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR CCA 90 bp GCATTCTATAATGCTGGCCACATGCAGAAACATTACAAGCAAAACAATGCCAGTCTGGGGTGGGTCGAATaGGACAAATTCTGCAAGTTA +
Preference number: 4 (lower is better)
Translates to: AFYNAGHMQKHYKQNNASLGWVE*DKFCKL
Trigger: TAACTTGCAGAATTTGTCCCATTCGACCCACCCCAG...ACTGGCATTGTTTTGCTTGTAATGTTTCTGCATGTGGCCAGCATTATAGAATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR TCA 90 bp TTTCAACCATTTAACATAAGCTATAGGCTATACCTCCTAACTACAGACTGTACATTCTTCAGTTTGGCCTaGGGCTTCTTGAGAGCGGAG +
Preference number: 4 (lower is better)
Translates to: FQPFNISYRLYLLTTDCTFFSLA*GFLRAE
Trigger: CTCCGCTCTCAAGAAGCCTCAGGCCAAACTGAAGAA...TGTACAGTCTGTAGTTAGGAGGTATAGCCTATAGCTTATGTTAAATGGTTGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR TCA 90 bp TGCAGAAGAATCCAGAGGGAAGTCAGCAGGTTGAAGAATAGGAAACAAGATTGGTTCATATCTTTTAACTaGGCTGTCAACTTGTCCAGC +
Preference number: 4 (lower is better)
Translates to: CRRIQREVSRLKNRKQDWFISFN*AVNLSS
Trigger: GCTGGACAAGTTGACAGCTCAGTTAAAAGATATGAA...CCAATCTTGTTTCCTATTCTTCAACCTGCTGACTTCCCTCTGGATTCTTCTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR TCA 90 bp TGGATAAAATGGCACAATATCTGGGACTGGTTGCAGAAGAATCCAGAGGGAAGTTTCATATCTTTTAACTaGGCTGTCAACTTGTCCAGC +
Preference number: 4 (lower is better)
Translates to: WIKWHNIWDWLQKNPEGSFISFN*AVNLSS
Trigger: GCTGGACAAGTTGACAGCTCAGTTAAAAGATATGAA...ACTTCCCTCTGGATTCTTCTGCAACCAGTCCCAGATATTGTGCCATTTTATCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR TCA 90 bp ATTACACTCACATATATTGTTTTGATACCTTGGCATACCCCACCTTGTACACTCCCAGACCTTTCATCTTaGTGGAGAATTCTCCCAGCA +
Preference number: 4 (lower is better)
Translates to: ITLTYIVLIPWHTPPCTLPDLSS*WRILPA
Trigger: TGCTGGGAGAATTCTCCATCAAGATGAAAGGTCTGG...GAGTGTACAAGGTGGGGTATGCCAAGGTATCAAAACAATATATGTGAGTGTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR TCA 90 bp TGCAGAAGAATCCAGAGGGAAGTCAGCAGGTTGAAGAATAGGAAACAAGATTGGATGAAAATTTCATATTaGTCTCCAGGACAGAGGCGT +
Preference number: 4 (lower is better)
Translates to: CRRIQREVSRLKNRKQDWMKISY*SPGQRR
Trigger: ACGCCTCTGTCCTGGAGATCAATATGAAATTTTCAT...CCAATCTTGTTTCCTATTCTTCAACCTGCTGACTTCCCTCTGGATTCTTCTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR TCA 90 bp ATAAAATGGCACAATATCTGGGACTGGTTGCAGAAGAATCCAGAGGGAAGTCAGGCCGGCCATACTTCATaGAAATTTCATATTGATCTC +
Preference number: 4 (lower is better)
Translates to: IKWHNIWDWLQKNPEGSQAGHTS*KFHIDL
Trigger: GAGATCAATATGAAATTTTCATGAAGTATGGCCGGC...CTGACTTCCCTCTGGATTCTTCTGCAACCAGTCCCAGATATTGTGCCATTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR TCA 90 bp ATATTCAAGAGGATGCTGGGGTGGGTCGAATGGGACAAATTCTGCAAGTTAGAAGCCGGCCATACTTCATaGAAATTTCATATTGATCTC +
Preference number: 4 (lower is better)
Translates to: IFKRMLGWVEWDKFCKLEAGHTS*KFHIDL
Trigger: GAGATCAATATGAAATTTTCATGAAGTATGGCCGGC...TTCTAACTTGCAGAATTTGTCCCATTCGACCCACCCCAGCATCCTCTTGAATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR TCA 90 bp ATATACAGATATGTACACGATAAGTTCACAGTTGAAAGAACCATTTGCCAGAAGATGGACATTCTCCTCTaGAGGGCTGCTGCCTTGTTC +
Preference number: 4 (lower is better)
Translates to: IYRYVHDKFTVERTICQKMDILL*RAAALF
Trigger: GAACAAGGCAGCAGCCCTTCAGAGGAGAATGTCCAT...CTTCTGGCAAATGGTTCTTTCAACTGTGAACTTATCGTGTACATATCTGTATAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR TCA 90 bp GAGCATTCTATAATGCTGGCCACATGCAGAAACATTACAAGCAAAACAATGCCAAATTTCTGGATTTGTTaGGTTGGAAGGGGAGCCTGT +
Preference number: 4 (lower is better)
Translates to: EHSIMLATCRNITSKTMPNFWIC*VGRGAC
Trigger: ACAGGCTCCCCTTCCAACTCAACAAATCCAGAAATT...TGGCATTGTTTTGCTTGTAATGTTTCTGCATGTGGCCAGCATTATAGAATGCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR TCA 90 bp TTTCAACCATTTAACATAAGCTATAGGCTATACCTCCTAACTACAGACTGTACAGTTCCTGGAAGATGCTaGGCTGGTGTCATCCATACC +
Preference number: 4 (lower is better)
Translates to: FQPFNISYRLYLLTTDCTVPGRC*AGVIHT
Trigger: GGTATGGATGACACCAGCTCAGCATCTTCCAGGAAC...TGTACAGTCTGTAGTTAGGAGGTATAGCCTATAGCTTATGTTAAATGGTTGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR TCA 90 bp ATATACAGATATGTACACGATAAGTTCACAGTTGAAAGAACCATTTGCCAGAAGTTCCTCCTTCAGGTGTaGCTTTGGCTCTTGGCCTTC +
Preference number: 4 (lower is better)
Translates to: IYRYVHDKFTVERTICQKFLLQV*LWLLAF
Trigger: GAAGGCCAAGAGCCAAAGTCACACCTGAAGGAGGAA...CTTCTGGCAAATGGTTCTTTCAACTGTGAACTTATCGTGTACATATCTGTATAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR TCA 90 bp TGGATAAAATGGCACAATATCTGGGACTGGTTGCAGAAGAATCCAGAGGGAAGTTCTTGGTTCAGATCCTaGAACTCTTTATACTGCTCT +
Preference number: 4 (lower is better)
Translates to: WIKWHNIWDWLQKNPEGSSWFRS*NSLYCS
Trigger: AGAGCAGTATAAAGAGTTTCAGGATCTGAACCAAGA...ACTTCCCTCTGGATTCTTCTGCAACCAGTCCCAGATATTGTGCCATTTTATCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR TCA 90 bp TGCAGAAGAATCCAGAGGGAAGTCAGCAGGTTGAAGAATAGGAAACAAGATTGGTCTTGGTTCAGATCCTaGAACTCTTTATACTGCTCT +
Preference number: 4 (lower is better)
Translates to: CRRIQREVSRLKNRKQDWSWFRS*NSLYCS
Trigger: AGAGCAGTATAAAGAGTTTCAGGATCTGAACCAAGA...CCAATCTTGTTTCCTATTCTTCAACCTGCTGACTTCCCTCTGGATTCTTCTGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR TCA 90 bp GATATGTACACGATAAGTTCACAGTTGAAAGAACCATTTGCCAGAAGCCTGGCAAAGCACTTTCAACTGTaGGACTTAAACTGGAAGACC +
Preference number: 4 (lower is better)
Translates to: DMYTISSQLKEPFARSLAKHFQL*DLNWKT
Trigger: GGTCTTCCAGTTTAAGTCTCACAGTTGAAAGTGCTT...TGCCAGGCTTCTGGCAAATGGTTCTTTCAACTGTGAACTTATCGTGTACATATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR TCA 90 bp CATTTTTATTTCAGTTGTCGTGTCTCTCAGGCTCTAAACAATTTCCAGCCCAAACTATGTTCTCATCACTaGCAGCTGCGAGTTTCTCCA +
Preference number: 4 (lower is better)
Translates to: HFYFSCRVSQALNNFQPKLCSHH*QLRVSP
Trigger: TGGAGAAACTCGCAGCTGTCAGTGATGAGAACATAG...TTTGGGCTGGAAATTGTTTAGAGCCTGAGAGACACGACAACTGAAATAAAAATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR TCA 90 bp ATTACACTCACATATATTGTTTTGATACCTTGGCATACCCCACCTTGTACACTCGCAACTTCAGTTCCATaGCGACCTCCGACTTTAACA +
Preference number: 4 (lower is better)
Translates to: ITLTYIVLIPWHTPPCTLATSVP*RPPTLT
Trigger: TGTTAAAGTCGGAGGTCGTCATGGAACTGAAGTTGC...GAGTGTACAAGGTGGGGTATGCCAAGGTATCAAAACAATATATGTGAGTGTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR TCA 90 bp CTCCACTCCTACTCCATTAGGATTTCTCTGACTTCTAGGTTCCTCCACCTCAAAGATGGACTCTTTCACTaGGTATTATTAGACACAATC +
Preference number: 4 (lower is better)
Translates to: LHSYSIRISLTSRFLHLKDGLFH*VLLDTI
Trigger: GATTGTGTCTAATAATACTCAGTGAAAGAGTCCATC...TTTGAGGTGGAGGAACCTAGAAGTCAGAGAAATCCTAATGGAGTAGGAGTGGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR TCA 90 bp CATTTTTATTTCAGTTGTCGTGTCTCTCAGGCTCTAAACAATTTCCAGCCCAAACCATTAGGATTTCTCTaGCTTCTAGGTTCCTCCACC +
Preference number: 4 (lower is better)
Translates to: HFYFSCRVSQALNNFQPKPLGFL*LLGSST
Trigger: GGTGGAGGAACCTAGAAGTCAGAGAAATCCTAATGG...TTTGGGCTGGAAATTGTTTAGAGCCTGAGAGACACGACAACTGAAATAAAAATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR TCA 90 bp ATTACACTCACATATATTGTTTTGATACCTTGGCATACCCCACCTTGTACACTCCCATTAGGATTTCTCTaGCTTCTAGGTTCCTCCACC +
Preference number: 4 (lower is better)
Translates to: ITLTYIVLIPWHTPPCTLPLGFL*LLGSST
Trigger: GGTGGAGGAACCTAGAAGTCAGAGAAATCCTAATGG...GAGTGTACAAGGTGGGGTATGCCAAGGTATCAAAACAATATATGTGAGTGTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR TCA 90 bp GATATGTACACGATAAGTTCACAGTTGAAAGAACCATTTGCCAGAAGCCTGGCAAGCAATAATGGGACCTaGTGTTTGAACTATTTGGCC +
Preference number: 4 (lower is better)
Translates to: DMYTISSQLKEPFARSLASNNGT*CLNYLA
Trigger: GGCCAAATAGTTCAAACATCAGGTCCCATTATTGCT...TGCCAGGCTTCTGGCAAATGGTTCTTTCAACTGTGAACTTATCGTGTACATATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR GCA 90 bp ATTACACTCACATATATTGTTTTGATACCTTGGCATACCCCACCTTGTACACTCGATGTTGCGAAGGCTTaGTTCATTTTGCTGGCACCA +
Preference number: 4 (lower is better)
Translates to: ITLTYIVLIPWHTPPCTLDVAKA*FILLAP
Trigger: TGGTGCCAGCAAAATGAAGCAAGCCTTCGCAACATC...GAGTGTACAAGGTGGGGTATGCCAAGGTATCAAAACAATATATGTGAGTGTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR GCA 90 bp ATTACACTCACATATATTGTTTTGATACCTTGGCATACCCCACCTTGTACACTCTTCAGTTTCCACCGCTaGCGGCCATACTTCATGAAA +
Preference number: 4 (lower is better)
Translates to: ITLTYIVLIPWHTPPCTLFSFHR*RPYFMK
Trigger: TTTCATGAAGTATGGCCGGCAGCGGTGGAAACTGAA...GAGTGTACAAGGTGGGGTATGCCAAGGTATCAAAACAATATATGTGAGTGTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR GCA 90 bp TGCAGAAGAATCCAGAGGGAAGTCAGCAGGTTGAAGAATAGGAAACAAGATTGGTTGCAGAAGTGCTTCTaGAACATCATTCTCAAGGAA +
Preference number: 4 (lower is better)
Translates to: CRRIQREVSRLKNRKQDWLQKCF*NIILKE
Trigger: TTCCTTGAGAATGATGTTGCAGAAGCACTTCTGCAA...CCAATCTTGTTTCCTATTCTTCAACCTGCTGACTTCCCTCTGGATTCTTCTGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR GCA 90 bp GATAAAATGGCACAATATCTGGGACTGGTTGCAGAAGAATCCAGAGGGAAGTCATTGCAGAAGTGCTTCTaGAACATCATTCTCAAGGAA +
Preference number: 4 (lower is better)
Translates to: DKMAQYLGLVAEESRGKSLQKCF*NIILKE
Trigger: TTCCTTGAGAATGATGTTGCAGAAGCACTTCTGCAA...TGACTTCCCTCTGGATTCTTCTGCAACCAGTCCCAGATATTGTGCCATTTTATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR GCA 90 bp GCATTCTATAATGCTGGCCACATGCAGAAACATTACAAGCAAAACAATGCCAGTCATCTAGAAAGGATCTaGAGCCTTCAGATTCTCCAC +
Preference number: 4 (lower is better)
Translates to: AFYNAGHMQKHYKQNNASHLERI*SLQILH
Trigger: GTGGAGAATCTGAAGGCTGCAGATCCTTTCTAGATG...ACTGGCATTGTTTTGCTTGTAATGTTTCTGCATGTGGCCAGCATTATAGAATGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR GCA 90 bp GATAAGTTCACAGTTGAAAGAACCATTTGCCAGAAGCCTGGCAAACAATTTGCACATCTAGAAAGGATCTaGAGCCTTCAGATTCTCCAC +
Preference number: 4 (lower is better)
Translates to: DKFTVERTICQKPGKQFAHLERI*SLQILH
Trigger: GTGGAGAATCTGAAGGCTGCAGATCCTTTCTAGATG...TGCAAATTGTTTGCCAGGCTTCTGGCAAATGGTTCTTTCAACTGTGAACTTATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR GCA 90 bp GATAAGTTCACAGTTGAAAGAACCATTTGCCAGAAGCCTGGCAAACAATTTGCAGAGAAAACAATTTGCTaGACGAGTTGGGTGCAGTAC +
Preference number: 4 (lower is better)
Translates to: DKFTVERTICQKPGKQFAEKTIC*TSWVQY
Trigger: GTACTGCACCCAACTCGTGCAGCAAATTGTTTTCTC...TGCAAATTGTTTGCCAGGCTTCTGGCAAATGGTTCTTTCAACTGTGAACTTATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR GCA 90 bp TTTCAACCATTTAACATAAGCTATAGGCTATACCTCCTAACTACAGACTGTACAAGACACCAACAGGGCTaGAGCACTTGGTCCAGAATG +
Preference number: 4 (lower is better)
Translates to: FQPFNISYRLYLLTTDCTRHQQG*STWSRM
Trigger: CATTCTGGACCAAGTGCTGCAGCCCTGTTGGTGTCT...TGTACAGTCTGTAGTTAGGAGGTATAGCCTATAGCTTATGTTAAATGGTTGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR GCA 90 bp GAGCATTCTATAATGCTGGCCACATGCAGAAACATTACAAGCAAAACAATGCCACTTGGGAAACAGAACTaGTATATCCCTCTGCCTAGT +
Preference number: 4 (lower is better)
Translates to: EHSIMLATCRNITSKTMPLGKQN*YIPLPS
Trigger: ACTAGGCAGAGGGATATAGCAGTTCTGTTTCCCAAG...TGGCATTGTTTTGCTTGTAATGTTTCTGCATGTGGCCAGCATTATAGAATGCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510784.8
ENST00000540914.5
CDS-3UTR GCA 90 bp TTTCAACCATTTAACATAAGCTATAGGCTATACCTCCTAACTACAGACTGTACATCTGCTTGCAAAAAGTaGGCGTGCCCCTTTCGCTCA +
Preference number: 4 (lower is better)
Translates to: FQPFNISYRLYLLTTDCTSACKK*ACPFRS
Trigger: TGAGCGAAAGGGGCACGCGCACTTTTTGCAAGCAGA...TGTACAGTCTGTAGTTAGGAGGTATAGCCTATAGCTTATGTTAAATGGTTGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000538035.6
CDS-3UTR CCA 90 bp ATTACACTCACATATATTGTTTTGATACCTTGGCATACCCCACCTTGTACACTCACACTCAGGGTTCTCTaGCATATAAAAGCCTCCGCA +
Preference number: 4 (lower is better)
Translates to: ITLTYIVLIPWHTPPCTLTLRVL*HIKASA
Trigger: TGCGGAGGCTTTTATATGCCAGAGAACCCTGAGTGT...GAGTGTACAAGGTGGGGTATGCCAAGGTATCAAAACAATATATGTGAGTGTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000259698.9
CDS-3UTR CCA 90 bp GAGCATTCTATAATGCTGGCCACATGCAGAAACATTACAAGCAAAACAATGCCAAAACCCGCAAAGGACTaGCTTCTAATGATCCCATTG +
Preference number: 4 (lower is better)
Translates to: EHSIMLATCRNITSKTMPKPAKD*LLMIPL
Trigger: CAATGGGATCATTAGAAGCCAGTCCTTTGCGGGTTT...TGGCATTGTTTTGCTTGTAATGTTTCTGCATGTGGCCAGCATTATAGAATGCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR CCA 90 bp TTTCAACCATTTAACATAAGCTATAGGCTATACCTCCTAACTACAGACTGTACACTTGCTTCATTTTGCTaGCACCATCCTGGAGGCGTC +
Preference number: 4 (lower is better)
Translates to: FQPFNISYRLYLLTTDCTLASFC*HHPGGV
Trigger: GACGCCTCCAGGATGGTGCCAGCAAAATGAAGCAAG...TGTACAGTCTGTAGTTAGGAGGTATAGCCTATAGCTTATGTTAAATGGTTGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CCA 90 bp CATTTTTATTTCAGTTGTCGTGTCTCTCAGGCTCTAAACAATTTCCAGCCCAAACACCTAAAGAAGGAGTaGTCTTTGAAGGTGGGCGTT +
Preference number: 4 (lower is better)
Translates to: HFYFSCRVSQALNNFQPKHLKKE*SLKVGV
Trigger: AACGCCCACCTTCAAAGACCACTCCTTCTTTAGGTG...TTTGGGCTGGAAATTGTTTAGAGCCTGAGAGACACGACAACTGAAATAAAAATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000259698.9
ENST00000613507.4
CDS-3UTR CCA 90 bp ATTACACTCACATATATTGTTTTGATACCTTGGCATACCCCACCTTGTACACTCCACCTAAAGAAGGAGTaGTCTTTGAAGGTGGGCGTT +
Preference number: 4 (lower is better)
Translates to: ITLTYIVLIPWHTPPCTLHLKKE*SLKVGV
Trigger: AACGCCCACCTTCAAAGACCACTCCTTCTTTAGGTG...GAGTGTACAAGGTGGGGTATGCCAAGGTATCAAAACAATATATGTGAGTGTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259698.9
ENST00000613507.4
CDS-3UTR CCA 90 bp ATTACACTCACATATATTGTTTTGATACCTTGGCATACCCCACCTTGTACACTCCTGGATTTGTTGAGTTaGAAGGGGAGCCTGTTGAGT +
Preference number: 4 (lower is better)
Translates to: ITLTYIVLIPWHTPPCTLLDLLS*KGSLLS
Trigger: ACTCAACAGGCTCCCCTTCCAACTCAACAAATCCAG...GAGTGTACAAGGTGGGGTATGCCAAGGTATCAAAACAATATATGTGAGTGTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CCA 90 bp CATTTTTATTTCAGTTGTCGTGTCTCTCAGGCTCTAAACAATTTCCAGCCCAAATGGAAGATGCTGAGCTaGTGTCATCCATACCCTCAT +
Preference number: 4 (lower is better)
Translates to: HFYFSCRVSQALNNFQPKWKMLS*CHPYPH
Trigger: ATGAGGGTATGGATGACACCAGCTCAGCATCTTCCA...TTTGGGCTGGAAATTGTTTAGAGCCTGAGAGACACGACAACTGAAATAAAAATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CCA 90 bp TTTCAACCATTTAACATAAGCTATAGGCTATACCTCCTAACTACAGACTGTACACAGTTCTGGCAAAGCTaGCCTCCAGCTGCTTCATCA +
Preference number: 4 (lower is better)
Translates to: FQPFNISYRLYLLTTDCTQFWQS*PPAASS
Trigger: TGATGAAGCAGCTGGAGGCCAGCTTTGCCAGAACTG...TGTACAGTCTGTAGTTAGGAGGTATAGCCTATAGCTTATGTTAAATGGTTGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CCA 90 bp ATTACACTCACATATATTGTTTTGATACCTTGGCATACCCCACCTTGTACACTCCTTCGTTGTCCTCTCTaGTTAATAGCAGAGCCAGAG +
Preference number: 4 (lower is better)
Translates to: ITLTYIVLIPWHTPPCTLLRCPL*LIAEPE
Trigger: CTCTGGCTCTGCTATTAACCAGAGAGGACAACGAAG...GAGTGTACAAGGTGGGGTATGCCAAGGTATCAAAACAATATATGTGAGTGTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CCA 90 bp GATAAGTTCACAGTTGAAAGAACCATTTGCCAGAAGCCTGGCAAACAATTTGCAGCTGCTTTCTGGAGCTaGAGGTTTGTCTTTGTTAGT +
Preference number: 4 (lower is better)
Translates to: DKFTVERTICQKPGKQFAAAFWS*RFVFVS
Trigger: ACTAACAAAGACAAACCTCCAGCTCCAGAAAGCAGC...TGCAAATTGTTTGCCAGGCTTCTGGCAAATGGTTCTTTCAACTGTGAACTTATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CCA 90 bp GAGCATTCTATAATGCTGGCCACATGCAGAAACATTACAAGCAAAACAATGCCATGGCACAAAAGCACATaGGAAAACGTCTTTCGGTCT +
Preference number: 4 (lower is better)
Translates to: EHSIMLATCRNITSKTMPWHKST*ENVFRS
Trigger: AGACCGAAAGACGTTTTCCCATGTGCTTTTGTGCCA...TGGCATTGTTTTGCTTGTAATGTTTCTGCATGTGGCCAGCATTATAGAATGCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR CCA 90 bp ATATTCAAGAGGATGCTGGGGTGGGTCGAATGGGACAAATTCTGCAAGTTAGAATCAACCACAAAGCCTTaGGAAACAGAACTGCTATAT +
Preference number: 4 (lower is better)
Translates to: IFKRMLGWVEWDKFCKLESTTKP*ETELLY
Trigger: ATATAGCAGTTCTGTTTCCCAAGGCTTTGTGGTTGA...TTCTAACTTGCAGAATTTGTCCCATTCGACCCACCCCAGCATCCTCTTGAATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510784.8
ENST00000540914.5
CDS-3UTR TCA 90 bp GATATGTACACGATAAGTTCACAGTTGAAAGAACCATTTGCCAGAAGCCTGGCAGCCGGCCATACTTCATaGAAATTTCATATTGATCTC +
Preference number: 4 (lower is better)
Translates to: DMYTISSQLKEPFARSLAAGHTS*KFHIDL
Trigger: GAGATCAATATGAAATTTTCATGAAGTATGGCCGGC...TGCCAGGCTTCTGGCAAATGGTTCTTTCAACTGTGAACTTATCGTGTACATATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR TCA 90 bp GATAAGTTCACAGTTGAAAGAACCATTTGCCAGAAGCCTGGCAAACAATTTGCAAAGCACTTTCAACTGTaGGACTTAAACTGGAAGACC +
Preference number: 4 (lower is better)
Translates to: DKFTVERTICQKPGKQFAKHFQL*DLNWKT
Trigger: GGTCTTCCAGTTTAAGTCTCACAGTTGAAAGTGCTT...TGCAAATTGTTTGCCAGGCTTCTGGCAAATGGTTCTTTCAACTGTGAACTTATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR TCA 90 bp CATTTTTATTTCAGTTGTCGTGTCTCTCAGGCTCTAAACAATTTCCAGCCCAAAGCACTTGGTCCAGAATaGCAGCAAAGACAGCTTTTT +
Preference number: 4 (lower is better)
Translates to: HFYFSCRVSQALNNFQPKALGPE*QQRQLF
Trigger: AAAAAGCTGTCTTTGCTGTCATTCTGGACCAAGTGC...TTTGGGCTGGAAATTGTTTAGAGCCTGAGAGACACGACAACTGAAATAAAAATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR TCA 90 bp ATATACAGATATGTACACGATAAGTTCACAGTTGAAAGAACCATTTGCCAGAAGAATACTGGAAAACAGTaGCGACTTCCGAGGACAGGC +
Preference number: 4 (lower is better)
Translates to: IYRYVHDKFTVERTICQKNTGKQ*RLPRTG
Trigger: GCCTGTCCTCGGAAGTCGTCACTGTTTTCCAGTATT...CTTCTGGCAAATGGTTCTTTCAACTGTGAACTTATCGTGTACATATCTGTATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR TCA 90 bp GAGCATTCTATAATGCTGGCCACATGCAGAAACATTACAAGCAAAACAATGCCAGCACCATTTAGTTTCTaGTCGTCAAGGTGTTTAGCA +
Preference number: 4 (lower is better)
Translates to: EHSIMLATCRNITSKTMPAPFSF*SSRCLA
Trigger: TGCTAAACACCTTGACGATCAGAAACTAAATGGTGC...TGGCATTGTTTTGCTTGTAATGTTTCTGCATGTGGCCAGCATTATAGAATGCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR TCA 90 bp GCATTCTATAATGCTGGCCACATGCAGAAACATTACAAGCAAAACAATGCCAGTTTTTCCTCTGAGGACTaGGGAAAGAATGAATGCCTT +
Preference number: 4 (lower is better)
Translates to: AFYNAGHMQKHYKQNNASFSSED*GKNECL
Trigger: AAGGCATTCATTCTTTCCTCAGTCCTCAGAGGAAAA...ACTGGCATTGTTTTGCTTGTAATGTTTCTGCATGTGGCCAGCATTATAGAATGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000645100.1
ENST00000647136.1
CDS-3UTR GCA 90 bp GCATTCTATAATGCTGGCCACATGCAGAAACATTACAAGCAAAACAATGCCAGTCATCCCAGCTCTGCTTaGCATTTACTTCTATTTTGC +
Preference number: 4 (lower is better)
Translates to: AFYNAGHMQKHYKQNNASHPSSA*HLLLFC
Trigger: GCAAAATAGAAGTAAATGGCAAGCAGAGCTGGGATG...ACTGGCATTGTTTTGCTTGTAATGTTTCTGCATGTGGCCAGCATTATAGAATGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR GCA 90 bp GATAAGTTCACAGTTGAAAGAACCATTTGCCAGAAGCCTGGCAAACAATTTGCATCTCCATCCCAGCTCTaGTTGCCATTTACTTCTATT +
Preference number: 4 (lower is better)
Translates to: DKFTVERTICQKPGKQFASPSQL*LPFTSI
Trigger: AATAGAAGTAAATGGCAAGCAGAGCTGGGATGGAGA...TGCAAATTGTTTGCCAGGCTTCTGGCAAATGGTTCTTTCAACTGTGAACTTATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR GCA 90 bp CATTTTTATTTCAGTTGTCGTGTCTCTCAGGCTCTAAACAATTTCCAGCCCAAAGCAAAGAAAGTGTCTTaGAAGGCACTCAAGACAGAC +
Preference number: 4 (lower is better)
Translates to: HFYFSCRVSQALNNFQPKAKKVS*KALKTD
Trigger: GTCTGTCTTGAGTGCCTTGCAAGACACTTTCTTTGC...TTTGGGCTGGAAATTGTTTAGAGCCTGAGAGACACGACAACTGAAATAAAAATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000259698.9
ENST00000613507.4
CDS-3UTR GCA 90 bp GATATGTACACGATAAGTTCACAGTTGAAAGAACCATTTGCCAGAAGCCTGGCATTGCAGAAGTGCTTCTaGAACATCATTCTCAAGGAA +
Preference number: 4 (lower is better)
Translates to: DMYTISSQLKEPFARSLALQKCF*NIILKE
Trigger: TTCCTTGAGAATGATGTTGCAGAAGCACTTCTGCAA...TGCCAGGCTTCTGGCAAATGGTTCTTTCAACTGTGAACTTATCGTGTACATATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR GCA 90 bp GTACAACCATGGATAAAATGGCACAATATCTGGGACTGGTTGCAGAAGAATCCATTGCAGAAGTGCTTCTaGAACATCATTCTCAAGGAA +
Preference number: 4 (lower is better)
Translates to: VQPWIKWHNIWDWLQKNPLQKCF*NIILKE
Trigger: TTCCTTGAGAATGATGTTGCAGAAGCACTTCTGCAA...TGGATTCTTCTGCAACCAGTCCCAGATATTGTGCCATTTTATCCATGGTTGTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
CDS-3UTR GCA 90 bp ATTACACTCACATATATTGTTTTGATACCTTGGCATACCCCACCTTGTACACTCCATCTAGAAAGGATCTaGAGCCTTCAGATTCTCCAC +
Preference number: 4 (lower is better)
Translates to: ITLTYIVLIPWHTPPCTLHLERI*SLQILH
Trigger: GTGGAGAATCTGAAGGCTGCAGATCCTTTCTAGATG...GAGTGTACAAGGTGGGGTATGCCAAGGTATCAAAACAATATATGTGAGTGTAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR GCA 90 bp GATAAGTTCACAGTTGAAAGAACCATTTGCCAGAAGCCTGGCAAACAATTTGCATCCATCACTTGGATCTaGCTAGAAAGCTTCTCTAAG +
Preference number: 4 (lower is better)
Translates to: DKFTVERTICQKPGKQFASITWI*LESFSK
Trigger: CTTAGAGAAGCTTTCTAGGCAGATCCAAGTGATGGA...TGCAAATTGTTTGCCAGGCTTCTGGCAAATGGTTCTTTCAACTGTGAACTTATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR GCA 90 bp GATAAGTTCACAGTTGAAAGAACCATTTGCCAGAAGCCTGGCAAACAATTTGCATCGAAACACTGGGTCTaGAAGTCCTGGATATTCTTT +
Preference number: 4 (lower is better)
Translates to: DKFTVERTICQKPGKQFASKHWV*KSWIFF
Trigger: AAAGAATATCCAGGACTTGCAGACCCAGTGTTTCGA...TGCAAATTGTTTGCCAGGCTTCTGGCAAATGGTTCTTTCAACTGTGAACTTATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR GCA 90 bp TTTCAACCATTTAACATAAGCTATAGGCTATACCTCCTAACTACAGACTGTACAGTCCAATTGTTCATATaGCAGCCGCCCATCTTCTCC +
Preference number: 4 (lower is better)
Translates to: FQPFNISYRLYLLTTDCTVQLFI*QPPIFS
Trigger: GGAGAAGATGGGCGGCTGGCATATGAACAATTGGAC...TGTACAGTCTGTAGTTAGGAGGTATAGCCTATAGCTTATGTTAAATGGTTGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR GCA 90 bp ATATACAGATATGTACACGATAAGTTCACAGTTGAAAGAACCATTTGCCAGAAGGCAATTATGGCTCACTaGAGCCTGAATCTTCTGGGC +
Preference number: 4 (lower is better)
Translates to: IYRYVHDKFTVERTICQKAIMAH*SLNLLG
Trigger: GCCCAGAAGATTCAGGCTGCAGTGAGCCATAATTGC...CTTCTGGCAAATGGTTCTTTCAACTGTGAACTTATCGTGTACATATCTGTATAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR GCA 90 bp TTTCAACCATTTAACATAAGCTATAGGCTATACCTCCTAACTACAGACTGTACAGCAATTATGGCTCACTaGAGCCTGAATCTTCTGGGC +
Preference number: 4 (lower is better)
Translates to: FQPFNISYRLYLLTTDCTAIMAH*SLNLLG
Trigger: GCCCAGAAGATTCAGGCTGCAGTGAGCCATAATTGC...TGTACAGTCTGTAGTTAGGAGGTATAGCCTATAGCTTATGTTAAATGGTTGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CCA 90 bp CATTTTTATTTCAGTTGTCGTGTCTCTCAGGCTCTAAACAATTTCCAGCCCAAAAAACCCGCAAAGGACTaGCTTCTAATGATCCCATTG +
Preference number: 4 (lower is better)
Translates to: HFYFSCRVSQALNNFQPKKPAKD*LLMIPL
Trigger: CAATGGGATCATTAGAAGCCAGTCCTTTGCGGGTTT...TTTGGGCTGGAAATTGTTTAGAGCCTGAGAGACACGACAACTGAAATAAAAATG
41% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CCA 90 bp CTCCACTCCTACTCCATTAGGATTTCTCTGACTTCTAGGTTCCTCCACCTCAAAGGATTGTTGTTTTTGTaGCCTAAATTGTGCATTTTC +
Preference number: 4 (lower is better)
Translates to: LHSYSIRISLTSRFLHLKGLLFL*PKLCIF
Trigger: GAAAATGCACAATTTAGGCCACAAAAACAACAATCC...TTTGAGGTGGAGGAACCTAGAAGTCAGAGAAATCCTAATGGAGTAGGAGTGGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CCA 90 bp GCATTCTATAATGCTGGCCACATGCAGAAACATTACAAGCAAAACAATGCCAGTCTAGCTCCACTTCAATaGTGCACATATTCTCTGTGT +
Preference number: 4 (lower is better)
Translates to: AFYNAGHMQKHYKQNNASLAPLQ*CTYSLC
Trigger: ACACAGAGAATATGTGCACCATTGAAGTGGAGCTAG...ACTGGCATTGTTTTGCTTGTAATGTTTCTGCATGTGGCCAGCATTATAGAATGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR CCA 90 bp ATATACAGATATGTACACGATAAGTTCACAGTTGAAAGAACCATTTGCCAGAAGCTGCAAACAGCTCTTTaGTCTCACAGGTCACGCTAC +
Preference number: 4 (lower is better)
Translates to: IYRYVHDKFTVERTICQKLQTAL*SHRSRY
Trigger: GTAGCGTGACCTGTGAGACCAAAGAGCTGTTTGCAG...CTTCTGGCAAATGGTTCTTTCAACTGTGAACTTATCGTGTACATATCTGTATAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CCA 90 bp TTTCAACCATTTAACATAAGCTATAGGCTATACCTCCTAACTACAGACTGTACATACCCTGGCTGTACATaGACATTCTCCTCTGAAGGG +
Preference number: 4 (lower is better)
Translates to: FQPFNISYRLYLLTTDCTYPGCT*TFSSEG
Trigger: CCCTTCAGAGGAGAATGTCCATGTACAGCCAGGGTA...TGTACAGTCTGTAGTTAGGAGGTATAGCCTATAGCTTATGTTAAATGGTTGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CCA 90 bp TTTCAACCATTTAACATAAGCTATAGGCTATACCTCCTAACTACAGACTGTACACAGGGTTCGAAACACTaGGTCTGCAAGTCCTGGATA +
Preference number: 4 (lower is better)
Translates to: FQPFNISYRLYLLTTDCTQGSKH*VCKSWI
Trigger: TATCCAGGACTTGCAGACCCAGTGTTTCGAACCCTG...TGTACAGTCTGTAGTTAGGAGGTATAGCCTATAGCTTATGTTAAATGGTTGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CCA 90 bp GATATGTACACGATAAGTTCACAGTTGAAAGAACCATTTGCCAGAAGCCTGGCAGAGCAAGGTCACTCATaGTTTGTAGCAGTTTTTCAT +
Preference number: 4 (lower is better)
Translates to: DMYTISSQLKEPFARSLAEQGHS*FVAVFH
Trigger: ATGAAAAACTGCTACAAACCATGAGTGACCTTGCTC...TGCCAGGCTTCTGGCAAATGGTTCTTTCAACTGTGAACTTATCGTGTACATATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CCA 90 bp GATATGTACACGATAAGTTCACAGTTGAAAGAACCATTTGCCAGAAGCCTGGCAATTGTTTTGATACCTTaGCATACCCCACCTTGTACA +
Preference number: 4 (lower is better)
Translates to: DMYTISSQLKEPFARSLAIVLIP*HTPPCT
Trigger: TGTACAAGGTGGGGTATGCCAAGGTATCAAAACAAT...TGCCAGGCTTCTGGCAAATGGTTCTTTCAACTGTGAACTTATCGTGTACATATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CCA 90 bp GCATTCTATAATGCTGGCCACATGCAGAAACATTACAAGCAAAACAATGCCAGTAGCAATCCCATTCTCTaGCCTGGAGCATTCTATAAT +
Preference number: 4 (lower is better)
Translates to: AFYNAGHMQKHYKQNNASSNPIL*PGAFYN
Trigger: ATTATAGAATGCTCCAGGCCAGAGAATGGGATTGCT...ACTGGCATTGTTTTGCTTGTAATGTTTCTGCATGTGGCCAGCATTATAGAATGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR TCA 90 bp GATAAGTTCACAGTTGAAAGAACCATTTGCCAGAAGCCTGGCAAACAATTTGCATTCATATCTTTTAACTaGGCTGTCAACTTGTCCAGC +
Preference number: 4 (lower is better)
Translates to: DKFTVERTICQKPGKQFAFISFN*AVNLSS
Trigger: GCTGGACAAGTTGACAGCTCAGTTAAAAGATATGAA...TGCAAATTGTTTGCCAGGCTTCTGGCAAATGGTTCTTTCAACTGTGAACTTATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR TCA 90 bp CATTTTTATTTCAGTTGTCGTGTCTCTCAGGCTCTAAACAATTTCCAGCCCAAATCTACCTTACTTATATaGAACTCCAGGCGTCTCATG +
Preference number: 4 (lower is better)
Translates to: HFYFSCRVSQALNNFQPKSTLLI*NSRRLM
Trigger: CATGAGACGCCTGGAGTTTCATATAAGTAAGGTAGA...TTTGGGCTGGAAATTGTTTAGAGCCTGAGAGACACGACAACTGAAATAAAAATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR TCA 90 bp GAGCATTCTATAATGCTGGCCACATGCAGAAACATTACAAGCAAAACAATGCCAATGAAAATTTCATATTaGTCTCCAGGACAGAGGCGT +
Preference number: 4 (lower is better)
Translates to: EHSIMLATCRNITSKTMPMKISY*SPGQRR
Trigger: ACGCCTCTGTCCTGGAGATCAATATGAAATTTTCAT...TGGCATTGTTTTGCTTGTAATGTTTCTGCATGTGGCCAGCATTATAGAATGCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR TCA 90 bp GATAAGTTCACAGTTGAAAGAACCATTTGCCAGAAGCCTGGCAAACAATTTGCAAAAGACAGCTTTTTGTaGAATTCTGGTATGGCTTCC +
Preference number: 4 (lower is better)
Translates to: DKFTVERTICQKPGKQFAKDSFL*NSGMAS
Trigger: GGAAGCCATACCAGAATTTCACAAAAAGCTGTCTTT...TGCAAATTGTTTGCCAGGCTTCTGGCAAATGGTTCTTTCAACTGTGAACTTATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR TCA 90 bp TTTCAACCATTTAACATAAGCTATAGGCTATACCTCCTAACTACAGACTGTACAGCAAGGCCTTTTCCCTaGAATGCTGATTTTTGGAGG +
Preference number: 4 (lower is better)
Translates to: FQPFNISYRLYLLTTDCTARPFP*NADFWR
Trigger: CCTCCAAAAATCAGCATTTCAGGGAAAAGGCCTTGC...TGTACAGTCTGTAGTTAGGAGGTATAGCCTATAGCTTATGTTAAATGGTTGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR TCA 90 bp GATAAGTTCACAGTTGAAAGAACCATTTGCCAGAAGCCTGGCAAACAATTTGCACTGAGGCCACATTTCTaGTTTCTTCAGTATCAGATT +
Preference number: 4 (lower is better)
Translates to: DKFTVERTICQKPGKQFALRPHF*FLQYQI
Trigger: AATCTGATACTGAAGAAATCAGAAATGTGGCCTCAG...TGCAAATTGTTTGCCAGGCTTCTGGCAAATGGTTCTTTCAACTGTGAACTTATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR TCA 90 bp ATATACAGATATGTACACGATAAGTTCACAGTTGAAAGAACCATTTGCCAGAAGGCAACTTCAGTTCCATaGCGACCTCCGACTTTAACA +
Preference number: 4 (lower is better)
Translates to: IYRYVHDKFTVERTICQKATSVP*RPPTLT
Trigger: TGTTAAAGTCGGAGGTCGTCATGGAACTGAAGTTGC...CTTCTGGCAAATGGTTCTTTCAACTGTGAACTTATCGTGTACATATCTGTATAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR TCA 90 bp ATATACAGATATGTACACGATAAGTTCACAGTTGAAAGAACCATTTGCCAGAAGCCATTAGGATTTCTCTaGCTTCTAGGTTCCTCCACC +
Preference number: 4 (lower is better)
Translates to: IYRYVHDKFTVERTICQKPLGFL*LLGSST
Trigger: GGTGGAGGAACCTAGAAGTCAGAGAAATCCTAATGG...CTTCTGGCAAATGGTTCTTTCAACTGTGAACTTATCGTGTACATATCTGTATAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR TCA 90 bp CATTTTTATTTCAGTTGTCGTGTCTCTCAGGCTCTAAACAATTTCCAGCCCAAAAGCAATAATGGGACCTaGTGTTTGAACTATTTGGCC +
Preference number: 4 (lower is better)
Translates to: HFYFSCRVSQALNNFQPKSNNGT*CLNYLA
Trigger: GGCCAAATAGTTCAAACATCAGGTCCCATTATTGCT...TTTGGGCTGGAAATTGTTTAGAGCCTGAGAGACACGACAACTGAAATAAAAATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR TCA 90 bp GAGCATTCTATAATGCTGGCCACATGCAGAAACATTACAAGCAAAACAATGCCAGTCAATGCTGAATACTaGCCAATCTCTAATTCCAAG +
Preference number: 4 (lower is better)
Translates to: EHSIMLATCRNITSKTMPVNAEY*PISNSK
Trigger: CTTGGAATTAGAGATTGGTCAGTATTCAGCATTGAC...TGGCATTGTTTTGCTTGTAATGTTTCTGCATGTGGCCAGCATTATAGAATGCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510784.8
ENST00000540914.5
CDS-3UTR GCA 90 bp TTTCAACCATTTAACATAAGCTATAGGCTATACCTCCTAACTACAGACTGTACATTCAGTTTCCACCGCTaGCGGCCATACTTCATGAAA +
Preference number: 4 (lower is better)
Translates to: FQPFNISYRLYLLTTDCTFSFHR*RPYFMK
Trigger: TTTCATGAAGTATGGCCGGCAGCGGTGGAAACTGAA...TGTACAGTCTGTAGTTAGGAGGTATAGCCTATAGCTTATGTTAAATGGTTGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR GCA 90 bp ATTACACTCACATATATTGTTTTGATACCTTGGCATACCCCACCTTGTACACTCCATCCCAGCTCTGCTTaGCATTTACTTCTATTTTGC +
Preference number: 4 (lower is better)
Translates to: ITLTYIVLIPWHTPPCTLHPSSA*HLLLFC
Trigger: GCAAAATAGAAGTAAATGGCAAGCAGAGCTGGGATG...GAGTGTACAAGGTGGGGTATGCCAAGGTATCAAAACAATATATGTGAGTGTAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR GCA 90 bp CATTTTTATTTCAGTTGTCGTGTCTCTCAGGCTCTAAACAATTTCCAGCCCAAATCTCCATCCCAGCTCTaGTTGCCATTTACTTCTATT +
Preference number: 4 (lower is better)
Translates to: HFYFSCRVSQALNNFQPKSPSQL*LPFTSI
Trigger: AATAGAAGTAAATGGCAAGCAGAGCTGGGATGGAGA...TTTGGGCTGGAAATTGTTTAGAGCCTGAGAGACACGACAACTGAAATAAAAATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR GCA 90 bp GAGCATTCTATAATGCTGGCCACATGCAGAAACATTACAAGCAAAACAATGCCATTGCAGAAGTGCTTCTaGAACATCATTCTCAAGGAA +
Preference number: 4 (lower is better)
Translates to: EHSIMLATCRNITSKTMPLQKCF*NIILKE
Trigger: TTCCTTGAGAATGATGTTGCAGAAGCACTTCTGCAA...TGGCATTGTTTTGCTTGTAATGTTTCTGCATGTGGCCAGCATTATAGAATGCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR GCA 90 bp ATTACACTCACATATATTGTTTTGATACCTTGGCATACCCCACCTTGTACACTCTCCATCACTTGGATCTaGCTAGAAAGCTTCTCTAAG +
Preference number: 4 (lower is better)
Translates to: ITLTYIVLIPWHTPPCTLSITWI*LESFSK
Trigger: CTTAGAGAAGCTTTCTAGGCAGATCCAAGTGATGGA...GAGTGTACAAGGTGGGGTATGCCAAGGTATCAAAACAATATATGTGAGTGTAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR GCA 90 bp CATTTTTATTTCAGTTGTCGTGTCTCTCAGGCTCTAAACAATTTCCAGCCCAAATCCATCACTTGGATCTaGCTAGAAAGCTTCTCTAAG +
Preference number: 4 (lower is better)
Translates to: HFYFSCRVSQALNNFQPKSITWI*LESFSK
Trigger: CTTAGAGAAGCTTTCTAGGCAGATCCAAGTGATGGA...TTTGGGCTGGAAATTGTTTAGAGCCTGAGAGACACGACAACTGAAATAAAAATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR GCA 90 bp CATTTTTATTTCAGTTGTCGTGTCTCTCAGGCTCTAAACAATTTCCAGCCCAAATCGAAACACTGGGTCTaGAAGTCCTGGATATTCTTT +
Preference number: 4 (lower is better)
Translates to: HFYFSCRVSQALNNFQPKSKHWV*KSWIFF
Trigger: AAAGAATATCCAGGACTTGCAGACCCAGTGTTTCGA...TTTGGGCTGGAAATTGTTTAGAGCCTGAGAGACACGACAACTGAAATAAAAATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR GCA 90 bp TTTCAACCATTTAACATAAGCTATAGGCTATACCTCCTAACTACAGACTGTACATCACATGGGCTGGAGTaGAGTAGTGTAATCTCAGCT +
Preference number: 4 (lower is better)
Translates to: FQPFNISYRLYLLTTDCTSHGLE*SSVISA
Trigger: AGCTGAGATTACACTACTGCACTCCAGCCCATGTGA...TGTACAGTCTGTAGTTAGGAGGTATAGCCTATAGCTTATGTTAAATGGTTGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CCA 90 bp TGCAGAAGAATCCAGAGGGAAGTCAGCAGGTTGAAGAATAGGAAACAAGATTGGGGATTGTTGTTTTTGTaGCCTAAATTGTGCATTTTC +
Preference number: 4 (lower is better)
Translates to: CRRIQREVSRLKNRKQDWGLLFL*PKLCIF
Trigger: GAAAATGCACAATTTAGGCCACAAAAACAACAATCC...CCAATCTTGTTTCCTATTCTTCAACCTGCTGACTTCCCTCTGGATTCTTCTGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR CCA 90 bp ATAAAATGGCACAATATCTGGGACTGGTTGCAGAAGAATCCAGAGGGAAGTCAGGGATTGTTGTTTTTGTaGCCTAAATTGTGCATTTTC +
Preference number: 4 (lower is better)
Translates to: IKWHNIWDWLQKNPEGSQGLLFL*PKLCIF
Trigger: GAAAATGCACAATTTAGGCCACAAAAACAACAATCC...CTGACTTCCCTCTGGATTCTTCTGCAACCAGTCCCAGATATTGTGCCATTTTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR CCA 90 bp ATATACAGATATGTACACGATAAGTTCACAGTTGAAAGAACCATTTGCCAGAAGCTGGATTTGTTGAGTTaGAAGGGGAGCCTGTTGAGT +
Preference number: 4 (lower is better)
Translates to: IYRYVHDKFTVERTICQKLDLLS*KGSLLS
Trigger: ACTCAACAGGCTCCCCTTCCAACTCAACAAATCCAG...CTTCTGGCAAATGGTTCTTTCAACTGTGAACTTATCGTGTACATATCTGTATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CCA 90 bp ATTACACTCACATATATTGTTTTGATACCTTGGCATACCCCACCTTGTACACTCTGGGTCTGCAAGTCCTaGATATTCTTTGTTGACAGT +
Preference number: 4 (lower is better)
Translates to: ITLTYIVLIPWHTPPCTLWVCKS*IFFVDS
Trigger: ACTGTCAACAAAGAATATCCAGGACTTGCAGACCCA...GAGTGTACAAGGTGGGGTATGCCAAGGTATCAAAACAATATATGTGAGTGTAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CCA 90 bp CATTTTTATTTCAGTTGTCGTGTCTCTCAGGCTCTAAACAATTTCCAGCCCAAATGGGTCTGCAAGTCCTaGATATTCTTTGTTGACAGT +
Preference number: 4 (lower is better)
Translates to: HFYFSCRVSQALNNFQPKWVCKS*IFFVDS
Trigger: ACTGTCAACAAAGAATATCCAGGACTTGCAGACCCA...TTTGGGCTGGAAATTGTTTAGAGCCTGAGAGACACGACAACTGAAATAAAAATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CCA 90 bp ATATACAGATATGTACACGATAAGTTCACAGTTGAAAGAACCATTTGCCAGAAGCTTCGTTGTCCTCTCTaGTTAATAGCAGAGCCAGAG +
Preference number: 4 (lower is better)
Translates to: IYRYVHDKFTVERTICQKLRCPL*LIAEPE
Trigger: CTCTGGCTCTGCTATTAACCAGAGAGGACAACGAAG...CTTCTGGCAAATGGTTCTTTCAACTGTGAACTTATCGTGTACATATCTGTATAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CCA 90 bp ATATACAGATATGTACACGATAAGTTCACAGTTGAAAGAACCATTTGCCAGAAGAGGCAAGCTGCTTTCTaGAGCTGGAGGTTTGTCTTT +
Preference number: 4 (lower is better)
Translates to: IYRYVHDKFTVERTICQKRQAAF*SWRFVF
Trigger: AAAGACAAACCTCCAGCTCCAGAAAGCAGCTTGCCT...CTTCTGGCAAATGGTTCTTTCAACTGTGAACTTATCGTGTACATATCTGTATAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CCA 90 bp GATATGTACACGATAAGTTCACAGTTGAAAGAACCATTTGCCAGAAGCCTGGCAAGACTCCAGAGTAGCTaGGAGCACATAAAATTAAAA +
Preference number: 4 (lower is better)
Translates to: DMYTISSQLKEPFARSLARLQSS*EHIKLK
Trigger: TTTTAATTTTATGTGCTCCCAGCTACTCTGGAGTCT...TGCCAGGCTTCTGGCAAATGGTTCTTTCAACTGTGAACTTATCGTGTACATATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CCA 90 bp ATTACACTCACATATATTGTTTTGATACCTTGGCATACCCCACCTTGTACACTCCATTTGCCAGAAGCCTaGCAAACAATTTGCACTTTG +
Preference number: 4 (lower is better)
Translates to: ITLTYIVLIPWHTPPCTLHLPEA*QTICTL
Trigger: CAAAGTGCAAATTGTTTGCCAGGCTTCTGGCAAATG...GAGTGTACAAGGTGGGGTATGCCAAGGTATCAAAACAATATATGTGAGTGTAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR TCA 90 bp ATATACAGATATGTACACGATAAGTTCACAGTTGAAAGAACCATTTGCCAGAAGCGGAGGAATTTTCAATaGAGGAGTTACACCTGGATC +
Preference number: 4 (lower is better)
Translates to: IYRYVHDKFTVERTICQKRRNFQ*RSYTWI
Trigger: GATCCAGGTGTAACTCCTTCATTGAAAATTCCTCCG...CTTCTGGCAAATGGTTCTTTCAACTGTGAACTTATCGTGTACATATCTGTATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR TCA 90 bp TTTCAACCATTTAACATAAGCTATAGGCTATACCTCCTAACTACAGACTGTACACGGAGGAATTTTCAATaGAGGAGTTACACCTGGATC +
Preference number: 4 (lower is better)
Translates to: FQPFNISYRLYLLTTDCTRRNFQ*RSYTWI
Trigger: GATCCAGGTGTAACTCCTTCATTGAAAATTCCTCCG...TGTACAGTCTGTAGTTAGGAGGTATAGCCTATAGCTTATGTTAAATGGTTGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR TCA 90 bp CATTTTTATTTCAGTTGTCGTGTCTCTCAGGCTCTAAACAATTTCCAGCCCAAATTCATATCTTTTAACTaGGCTGTCAACTTGTCCAGC +
Preference number: 4 (lower is better)
Translates to: HFYFSCRVSQALNNFQPKFISFN*AVNLSS
Trigger: GCTGGACAAGTTGACAGCTCAGTTAAAAGATATGAA...TTTGGGCTGGAAATTGTTTAGAGCCTGAGAGACACGACAACTGAAATAAAAATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR TCA 90 bp ATTACACTCACATATATTGTTTTGATACCTTGGCATACCCCACCTTGTACACTCGCCGGCCATACTTCATaGAAATTTCATATTGATCTC +
Preference number: 4 (lower is better)
Translates to: ITLTYIVLIPWHTPPCTLAGHTS*KFHIDL
Trigger: GAGATCAATATGAAATTTTCATGAAGTATGGCCGGC...GAGTGTACAAGGTGGGGTATGCCAAGGTATCAAAACAATATATGTGAGTGTAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR TCA 90 bp TTTCAACCATTTAACATAAGCTATAGGCTATACCTCCTAACTACAGACTGTACAAATTTCTGGATTTGTTaGGTTGGAAGGGGAGCCTGT +
Preference number: 4 (lower is better)
Translates to: FQPFNISYRLYLLTTDCTNFWIC*VGRGAC
Trigger: ACAGGCTCCCCTTCCAACTCAACAAATCCAGAAATT...TGTACAGTCTGTAGTTAGGAGGTATAGCCTATAGCTTATGTTAAATGGTTGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR TCA 90 bp ATTACACTCACATATATTGTTTTGATACCTTGGCATACCCCACCTTGTACACTCTCTTGGTTCAGATCCTaGAACTCTTTATACTGCTCT +
Preference number: 4 (lower is better)
Translates to: ITLTYIVLIPWHTPPCTLSWFRS*NSLYCS
Trigger: AGAGCAGTATAAAGAGTTTCAGGATCTGAACCAAGA...GAGTGTACAAGGTGGGGTATGCCAAGGTATCAAAACAATATATGTGAGTGTAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR TCA 90 bp CATTTTTATTTCAGTTGTCGTGTCTCTCAGGCTCTAAACAATTTCCAGCCCAAAAAAGACAGCTTTTTGTaGAATTCTGGTATGGCTTCC +
Preference number: 4 (lower is better)
Translates to: HFYFSCRVSQALNNFQPKKDSFL*NSGMAS
Trigger: GGAAGCCATACCAGAATTTCACAAAAAGCTGTCTTT...TTTGGGCTGGAAATTGTTTAGAGCCTGAGAGACACGACAACTGAAATAAAAATG
39% GC, longest homopolymer 6 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR TCA 90 bp ATATACAGATATGTACACGATAAGTTCACAGTTGAAAGAACCATTTGCCAGAAGCTGGATATTCTTTGTTaGCAGTTCTGGCAAAGCTGG +
Preference number: 4 (lower is better)
Translates to: IYRYVHDKFTVERTICQKLDILC*QFWQSW
Trigger: CCAGCTTTGCCAGAACTGTCAACAAAGAATATCCAG...CTTCTGGCAAATGGTTCTTTCAACTGTGAACTTATCGTGTACATATCTGTATAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR TCA 90 bp TTTCAACCATTTAACATAAGCTATAGGCTATACCTCCTAACTACAGACTGTACACTGGATATTCTTTGTTaGCAGTTCTGGCAAAGCTGG +
Preference number: 4 (lower is better)
Translates to: FQPFNISYRLYLLTTDCTLDILC*QFWQSW
Trigger: CCAGCTTTGCCAGAACTGTCAACAAAGAATATCCAG...TGTACAGTCTGTAGTTAGGAGGTATAGCCTATAGCTTATGTTAAATGGTTGAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR TCA 90 bp ATTACACTCACATATATTGTTTTGATACCTTGGCATACCCCACCTTGTACACTCAAACTGCAAGGCATATaGTGTTTGTCGAAGTATCAC +
Preference number: 4 (lower is better)
Translates to: ITLTYIVLIPWHTPPCTLKLQGI*CLSKYH
Trigger: GTGATACTTCGACAAACATCATATGCCTTGCAGTTT...GAGTGTACAAGGTGGGGTATGCCAAGGTATCAAAACAATATATGTGAGTGTAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR TCA 90 bp CATTTTTATTTCAGTTGTCGTGTCTCTCAGGCTCTAAACAATTTCCAGCCCAAAAGCATCACAGGTTTGTaGATCTACAGCTTTTGGTTT +
Preference number: 4 (lower is better)
Translates to: HFYFSCRVSQALNNFQPKSITGL*IYSFWF
Trigger: AAACCAAAAGCTGTAGATTCACAAACCTGTGATGCT...TTTGGGCTGGAAATTGTTTAGAGCCTGAGAGACACGACAACTGAAATAAAAATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR TCA 90 bp ATATACAGATATGTACACGATAAGTTCACAGTTGAAAGAACCATTTGCCAGAAGATGGGACCTGATGTTTaGACTATTTGGCCAGGGAAT +
Preference number: 4 (lower is better)
Translates to: IYRYVHDKFTVERTICQKMGPDV*TIWPGN
Trigger: ATTCCCTGGCCAAATAGTTCAAACATCAGGTCCCAT...CTTCTGGCAAATGGTTCTTTCAACTGTGAACTTATCGTGTACATATCTGTATAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR GCA 90 bp CATTTTTATTTCAGTTGTCGTGTCTCTCAGGCTCTAAACAATTTCCAGCCCAAAGGCTTACTGCTGGCTTaGATTTTAGAATATCATCCA +
Preference number: 4 (lower is better)
Translates to: HFYFSCRVSQALNNFQPKGLLLA*ILEYHP
Trigger: TGGATGATATTCTAAAATGCAAGCCAGCAGTAAGCC...TTTGGGCTGGAAATTGTTTAGAGCCTGAGAGACACGACAACTGAAATAAAAATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR GCA 90 bp ATATACAGATATGTACACGATAAGTTCACAGTTGAAAGAACCATTTGCCAGAAGGAGAAAACAATTTGCTaGACGAGTTGGGTGCAGTAC +
Preference number: 4 (lower is better)
Translates to: IYRYVHDKFTVERTICQKEKTIC*TSWVQY
Trigger: GTACTGCACCCAACTCGTGCAGCAAATTGTTTTCTC...CTTCTGGCAAATGGTTCTTTCAACTGTGAACTTATCGTGTACATATCTGTATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CCA 90 bp ATATACAGATATGTACACGATAAGTTCACAGTTGAAAGAACCATTTGCCAGAAGAAACCCGCAAAGGACTaGCTTCTAATGATCCCATTG +
Preference number: 4 (lower is better)
Translates to: IYRYVHDKFTVERTICQKKPAKD*LLMIPL
Trigger: CAATGGGATCATTAGAAGCCAGTCCTTTGCGGGTTT...CTTCTGGCAAATGGTTCTTTCAACTGTGAACTTATCGTGTACATATCTGTATAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CCA 90 bp GATAAGTTCACAGTTGAAAGAACCATTTGCCAGAAGCCTGGCAAACAATTTGCACTTTTTGTGAAATTCTaGTATGGCTTCCACAACAGA +
Preference number: 4 (lower is better)
Translates to: DKFTVERTICQKPGKQFALFVKF*YGFHNR
Trigger: TCTGTTGTGGAAGCCATACCAGAATTTCACAAAAAG...TGCAAATTGTTTGCCAGGCTTCTGGCAAATGGTTCTTTCAACTGTGAACTTATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CCA 90 bp CATTTTTATTTCAGTTGTCGTGTCTCTCAGGCTCTAAACAATTTCCAGCCCAAAGAGCAAGGTCACTCATaGTTTGTAGCAGTTTTTCAT +
Preference number: 4 (lower is better)
Translates to: HFYFSCRVSQALNNFQPKEQGHS*FVAVFH
Trigger: ATGAAAAACTGCTACAAACCATGAGTGACCTTGCTC...TTTGGGCTGGAAATTGTTTAGAGCCTGAGAGACACGACAACTGAAATAAAAATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CCA 90 bp TTTCAACCATTTAACATAAGCTATAGGCTATACCTCCTAACTACAGACTGTACAGCTGCTTTCTGGAGCTaGAGGTTTGTCTTTGTTAGT +
Preference number: 4 (lower is better)
Translates to: FQPFNISYRLYLLTTDCTAAFWS*RFVFVS
Trigger: ACTAACAAAGACAAACCTCCAGCTCCAGAAAGCAGC...TGTACAGTCTGTAGTTAGGAGGTATAGCCTATAGCTTATGTTAAATGGTTGAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CCA 90 bp CATTTTTATTTCAGTTGTCGTGTCTCTCAGGCTCTAAACAATTTCCAGCCCAAAATTGTTTTGATACCTTaGCATACCCCACCTTGTACA +
Preference number: 4 (lower is better)
Translates to: HFYFSCRVSQALNNFQPKIVLIP*HTPPCT
Trigger: TGTACAAGGTGGGGTATGCCAAGGTATCAAAACAAT...TTTGGGCTGGAAATTGTTTAGAGCCTGAGAGACACGACAACTGAAATAAAAATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR TCA 90 bp ATATACAGATATGTACACGATAAGTTCACAGTTGAAAGAACCATTTGCCAGAAGTCTACCTTACTTATATaGAACTCCAGGCGTCTCATG +
Preference number: 4 (lower is better)
Translates to: IYRYVHDKFTVERTICQKSTLLI*NSRRLM
Trigger: CATGAGACGCCTGGAGTTTCATATAAGTAAGGTAGA...CTTCTGGCAAATGGTTCTTTCAACTGTGAACTTATCGTGTACATATCTGTATAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR TCA 90 bp CATTTTTATTTCAGTTGTCGTGTCTCTCAGGCTCTAAACAATTTCCAGCCCAAAGATGGACTCTTTCACTaGGTATTATTAGACACAATC +
Preference number: 4 (lower is better)
Translates to: HFYFSCRVSQALNNFQPKDGLFH*VLLDTI
Trigger: GATTGTGTCTAATAATACTCAGTGAAAGAGTCCATC...TTTGGGCTGGAAATTGTTTAGAGCCTGAGAGACACGACAACTGAAATAAAAATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR GCA 90 bp ATATACAGATATGTACACGATAAGTTCACAGTTGAAAGAACCATTTGCCAGAAGCATCCCAGCTCTGCTTaGCATTTACTTCTATTTTGC +
Preference number: 4 (lower is better)
Translates to: IYRYVHDKFTVERTICQKHPSSA*HLLLFC
Trigger: GCAAAATAGAAGTAAATGGCAAGCAGAGCTGGGATG...CTTCTGGCAAATGGTTCTTTCAACTGTGAACTTATCGTGTACATATCTGTATAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR GCA 90 bp TTTCAACCATTTAACATAAGCTATAGGCTATACCTCCTAACTACAGACTGTACATCTCCATCCCAGCTCTaGTTGCCATTTACTTCTATT +
Preference number: 4 (lower is better)
Translates to: FQPFNISYRLYLLTTDCTSPSQL*LPFTSI
Trigger: AATAGAAGTAAATGGCAAGCAGAGCTGGGATGGAGA...TGTACAGTCTGTAGTTAGGAGGTATAGCCTATAGCTTATGTTAAATGGTTGAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CCA 90 bp GCATTCTATAATGCTGGCCACATGCAGAAACATTACAAGCAAAACAATGCCAGTGGATTGTTGTTTTTGTaGCCTAAATTGTGCATTTTC +
Preference number: 4 (lower is better)
Translates to: AFYNAGHMQKHYKQNNASGLLFL*PKLCIF
Trigger: GAAAATGCACAATTTAGGCCACAAAAACAACAATCC...ACTGGCATTGTTTTGCTTGTAATGTTTCTGCATGTGGCCAGCATTATAGAATGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR CCA 90 bp CATTTTTATTTCAGTTGTCGTGTCTCTCAGGCTCTAAACAATTTCCAGCCCAAACTTTTTGTGAAATTCTaGTATGGCTTCCACAACAGA +
Preference number: 4 (lower is better)
Translates to: HFYFSCRVSQALNNFQPKLFVKF*YGFHNR
Trigger: TCTGTTGTGGAAGCCATACCAGAATTTCACAAAAAG...TTTGGGCTGGAAATTGTTTAGAGCCTGAGAGACACGACAACTGAAATAAAAATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CCA 90 bp ATTACACTCACATATATTGTTTTGATACCTTGGCATACCCCACCTTGTACACTCAGACTCCAGAGTAGCTaGGAGCACATAAAATTAAAA +
Preference number: 4 (lower is better)
Translates to: ITLTYIVLIPWHTPPCTLRLQSS*EHIKLK
Trigger: TTTTAATTTTATGTGCTCCCAGCTACTCTGGAGTCT...GAGTGTACAAGGTGGGGTATGCCAAGGTATCAAAACAATATATGTGAGTGTAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CCA 90 bp ATATACAGATATGTACACGATAAGTTCACAGTTGAAAGAACCATTTGCCAGAAGCATTTGCCAGAAGCCTaGCAAACAATTTGCACTTTG +
Preference number: 4 (lower is better)
Translates to: IYRYVHDKFTVERTICQKHLPEA*QTICTL
Trigger: CAAAGTGCAAATTGTTTGCCAGGCTTCTGGCAAATG...CTTCTGGCAAATGGTTCTTTCAACTGTGAACTTATCGTGTACATATCTGTATAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CCA 90 bp TTTCAACCATTTAACATAAGCTATAGGCTATACCTCCTAACTACAGACTGTACATTTGAAAAGAAGGAGTaGTCTTTGAAGGTGGGCGTT +
Preference number: 4 (lower is better)
Translates to: FQPFNISYRLYLLTTDCTFEKKE*SLKVGV
Trigger: AACGCCCACCTTCAAAGACCACTCCTTCTTTTCAAA...TGTACAGTCTGTAGTTAGGAGGTATAGCCTATAGCTTATGTTAAATGGTTGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538035.6
ENST00000643898.2
CDS-3UTR TCA 90 bp TTTCAACCATTTAACATAAGCTATAGGCTATACCTCCTAACTACAGACTGTACATTCATATCTTTTAACTaGGCTGTCAACTTGTCCAGC +
Preference number: 4 (lower is better)
Translates to: FQPFNISYRLYLLTTDCTFISFN*AVNLSS
Trigger: GCTGGACAAGTTGACAGCTCAGTTAAAAGATATGAA...TGTACAGTCTGTAGTTAGGAGGTATAGCCTATAGCTTATGTTAAATGGTTGAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR TCA 90 bp TTTCAACCATTTAACATAAGCTATAGGCTATACCTCCTAACTACAGACTGTACAGCCGGCCATACTTCATaGAAATTTCATATTGATCTC +
Preference number: 4 (lower is better)
Translates to: FQPFNISYRLYLLTTDCTAGHTS*KFHIDL
Trigger: GAGATCAATATGAAATTTTCATGAAGTATGGCCGGC...TGTACAGTCTGTAGTTAGGAGGTATAGCCTATAGCTTATGTTAAATGGTTGAAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR TCA 90 bp ATATACAGATATGTACACGATAAGTTCACAGTTGAAAGAACCATTTGCCAGAAGTCTTGGTTCAGATCCTaGAACTCTTTATACTGCTCT +
Preference number: 4 (lower is better)
Translates to: IYRYVHDKFTVERTICQKSWFRS*NSLYCS
Trigger: AGAGCAGTATAAAGAGTTTCAGGATCTGAACCAAGA...CTTCTGGCAAATGGTTCTTTCAACTGTGAACTTATCGTGTACATATCTGTATAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR TCA 90 bp TTTCAACCATTTAACATAAGCTATAGGCTATACCTCCTAACTACAGACTGTACACTGAGGCCACATTTCTaGTTTCTTCAGTATCAGATT +
Preference number: 4 (lower is better)
Translates to: FQPFNISYRLYLLTTDCTLRPHF*FLQYQI
Trigger: AATCTGATACTGAAGAAATCAGAAATGTGGCCTCAG...TGTACAGTCTGTAGTTAGGAGGTATAGCCTATAGCTTATGTTAAATGGTTGAAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR TCA 90 bp TTTCAACCATTTAACATAAGCTATAGGCTATACCTCCTAACTACAGACTGTACAAAACTGCAAGGCATATaGTGTTTGTCGAAGTATCAC +
Preference number: 4 (lower is better)
Translates to: FQPFNISYRLYLLTTDCTKLQGI*CLSKYH
Trigger: GTGATACTTCGACAAACATCATATGCCTTGCAGTTT...TGTACAGTCTGTAGTTAGGAGGTATAGCCTATAGCTTATGTTAAATGGTTGAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR TCA 90 bp TTTCAACCATTTAACATAAGCTATAGGCTATACCTCCTAACTACAGACTGTACAAGCATCACAGGTTTGTaGATCTACAGCTTTTGGTTT +
Preference number: 4 (lower is better)
Translates to: FQPFNISYRLYLLTTDCTSITGL*IYSFWF
Trigger: AAACCAAAAGCTGTAGATTCACAAACCTGTGATGCT...TGTACAGTCTGTAGTTAGGAGGTATAGCCTATAGCTTATGTTAAATGGTTGAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR GCA 90 bp ATATACAGATATGTACACGATAAGTTCACAGTTGAAAGAACCATTTGCCAGAAGGGCTTACTGCTGGCTTaGATTTTAGAATATCATCCA +
Preference number: 4 (lower is better)
Translates to: IYRYVHDKFTVERTICQKGLLLA*ILEYHP
Trigger: TGGATGATATTCTAAAATGCAAGCCAGCAGTAAGCC...CTTCTGGCAAATGGTTCTTTCAACTGTGAACTTATCGTGTACATATCTGTATAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CCA 90 bp ATTACACTCACATATATTGTTTTGATACCTTGGCATACCCCACCTTGTACACTCGGATTGTTGTTTTTGTaGCCTAAATTGTGCATTTTC +
Preference number: 4 (lower is better)
Translates to: ITLTYIVLIPWHTPPCTLGLLFL*PKLCIF
Trigger: GAAAATGCACAATTTAGGCCACAAAAACAACAATCC...GAGTGTACAAGGTGGGGTATGCCAAGGTATCAAAACAATATATGTGAGTGTAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CCA 90 bp ATATACAGATATGTACACGATAAGTTCACAGTTGAAAGAACCATTTGCCAGAAGGAGCAAGGTCACTCATaGTTTGTAGCAGTTTTTCAT +
Preference number: 4 (lower is better)
Translates to: IYRYVHDKFTVERTICQKEQGHS*FVAVFH
Trigger: ATGAAAAACTGCTACAAACCATGAGTGACCTTGCTC...CTTCTGGCAAATGGTTCTTTCAACTGTGAACTTATCGTGTACATATCTGTATAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CCA 90 bp TTTCAACCATTTAACATAAGCTATAGGCTATACCTCCTAACTACAGACTGTACAATTGTTTTGATACCTTaGCATACCCCACCTTGTACA +
Preference number: 4 (lower is better)
Translates to: FQPFNISYRLYLLTTDCTIVLIP*HTPPCT
Trigger: TGTACAAGGTGGGGTATGCCAAGGTATCAAAACAAT...TGTACAGTCTGTAGTTAGGAGGTATAGCCTATAGCTTATGTTAAATGGTTGAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CCA 90 bp ATATACAGATATGTACACGATAAGTTCACAGTTGAAAGAACCATTTGCCAGAAGCTTTTTGTGAAATTCTaGTATGGCTTCCACAACAGA +
Preference number: 4 (lower is better)
Translates to: IYRYVHDKFTVERTICQKLFVKF*YGFHNR
Trigger: TCTGTTGTGGAAGCCATACCAGAATTTCACAAAAAG...CTTCTGGCAAATGGTTCTTTCAACTGTGAACTTATCGTGTACATATCTGTATAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS GCA 90 bp CCTCCGCACCAATGCAATGCCCGGAGCTGCCCGCACCTCCGGCTTTaGAGACAGCCTGAGCTGGCTCACTTGGGTGAAGGGGACCCCGGG +
Preference number: 5 (lower is better)
Translates to: PPHQCNARSCPHLRL*RQPELAHLGEGDPG
Trigger: CCCGGGGTCCCCTTCACCCAAGTGAGCCAGCTCAGGCTGTCTGCAAAGCCGGAGGTGCGGGCAGCTCCGGGCATTGCATTGGTGCGGAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259698.9
ENST00000644411.1
ENST00000644621.1
CDS-3UTR CAA 90 bp GCCTCAAAGGGAACAAGTCCCACCACTTCCCTGACCAGGCCCTGGCATCATGGGAGGGCGCAGTCCCCGTaGGGCAGGTCACTGAAGCTG +
Preference number: 5 (lower is better)
Translates to: ASKGTSPTTSLTRPWHHGRAQSP*GRSLKL
Trigger: CAGCTTCAGTGACCTGCCCAACGGGGACTGCGCCCT...CCCATGATGCCAGGGCCTGGTCAGGGAAGTGGTGGGACTTGTTCCCTTTGAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS TCA 90 bp AGGCAGCAGCCCCGGCAGTCTCAGCAGTCACACTGCCGACCGAGGTaGTTTCCTTTCCTTGGGTTGCCCAAGCCCTCTGGAGGGCAGCTT +
Preference number: 5 (lower is better)
Translates to: RQQPRQSQQSHCRPR*FPFLGLPKPSGGQL
Trigger: AAGCTGCCCTCCAGAGGGCTTGGGCAACCCAAGGAAAGGAAATCACCTCGGTCGGCAGTGTGACTGCTGAGACTGCCGGGGCTGCTGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613507.4
CDS TCA 90 bp GTGGGCGTTTCCGGGGTACCCTGGCTGTACATGGACATTCTCCTCTaGAGGGCTGCTGCCTTGTTCCCAGCGCCTGAGGATGCGGTCATG +
Preference number: 5 (lower is better)
Translates to: VGVSGVPWLYMDILL*RAAALFPAPEDAVM
Trigger: CATGACCGCATCCTCAGGCGCTGGGAACAAGGCAGCAGCCCTTCAGAGGAGAATGTCCATGTACAGCCAGGGTACCCCGGAAACGCCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000259698.9
ENST00000378023.8
ENST00000510784.8
ENST00000538035.6
ENST00000540914.5
ENST00000613507.4
ENST00000643623.1
ENST00000643898.2
ENST00000644411.1
ENST00000644621.1
ENST00000645100.1
ENST00000647136.1
CDS GCA 90 bp CCCTTTCGCTCAGCAACTTCCCGACCGTACCCTGTGGGCTTCAGATaGCCGAACCCACCAGGGTGGTGGAAGCTGAGGACGCTCCAGTTT +
Preference number: 5 (lower is better)
Translates to: PFRSATSRPYPVGFR*PNPPGWWKLRTLQF
Trigger: AAACTGGAGCGTCCTCAGCTTCCACCACCCTGGTGGGTTCGGGCATCTGAAGCCCACAGGGTACGGTCGGGAAGTTGCTGAGCGAAAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000538035.6
ENST00000643623.1
CDS CCA 90 bp GCAGTCTCAGCAGTCACACTGCCGACCGAGGTGATTTCCTTTCCTTaGGTTGCCCAAGCCCTCTGGAGGGCAGCTTCCGCATCTGCCCTG +
Preference number: 5 (lower is better)
Translates to: AVSAVTLPTEVISFP*VAQALWRAASASAL
Trigger: CAGGGCAGATGCGGAAGCTGCCCTCCAGAGGGCTTGGGCAACCCAAGGAAAGGAAATCACCTCGGTCGGCAGTGTGACTGCTGAGACTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613507.4
CDS-3UTR CAA 90 bp CAAGAAGCAGCCCTGCTTCCTCTGGAGCTCTGCCTCAAAGGGAACAAGTCCCACAGCTCTAGCACGGCCTaGGGACTCGGCCTGAGGGAG +
Preference number: 5 (lower is better)
Translates to: QEAALLPLELCLKGNKSHSSSTA*GLGLRE
Trigger: CTCCCTCAGGCCGAGTCCCAAGGCCGTGCTAGAGCT...GTGGGACTTGTTCCCTTTGAGGCAGAGCTCCAGAGGAAGCAGGGCTGCTTCTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644411.1
CDS-3UTR CAA 90 bp AGAAGCAGCCCTGCTTCCTCTGGAGCTCTGCCTCAAAGGGAACAAGTCCCACCAAGGGCGCAGTCCCCGTaGGGCAGGTCACTGAAGCTG +
Preference number: 5 (lower is better)
Translates to: RSSPASSGALPQREQVPPRAQSP*GRSLKL
Trigger: CAGCTTCAGTGACCTGCCCAACGGGGACTGCGCCCT...TGGTGGGACTTGTTCCCTTTGAGGCAGAGCTCCAGAGGAAGCAGGGCTGCTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS GCA 90 bp GGACTCGGCCTGAGGGAGGGCAGGTCACTGAAGGAGCGGCTGCGGTaGAGCTTGGCAAAGAAAGTGTCTTGCAAGGCACTCAAGACAGAC +
Preference number: 5 (lower is better)
Translates to: GLGLREGRSLKERLR*SLAKKVSCKALKTD
Trigger: GTCTGTCTTGAGTGCCTTGCAAGACACTTTCTTTGCCAAGCTGCACCGCAGCCGCTCCTTCAGTGACCTGCCCTCCCTCAGGCCGAGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259698.9
ENST00000613507.4
ENST00000644411.1
CDS GCA 90 bp CCACTCCCCAGGGCATCCTTCAGTTCTGCTTGCAAAAAGTGCGCGTaGCCCTTTCGCTCAGCAACTTCCCGACCGTACCCTGTGGGCTTC +
Preference number: 5 (lower is better)
Translates to: PLPRASFSSACKKCA*PFRSATSRPYPVGF
Trigger: GAAGCCCACAGGGTACGGTCGGGAAGTTGCTGAGCGAAAGGGGCACGCGCACTTTTTGCAAGCAGAACTGAAGGATGCCCTGGGGAGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000538035.6
ENST00000643623.1
CDS CCA 90 bp AGGACTGTCGGCGGCAAGCCTCAGATGGGGCCGAGGCAGGTTTTCTaGGCTCCTCTGGGTCTTCCTCCTTCAGGTGTGACTTTGGCTCTT +
Preference number: 5 (lower is better)
Translates to: RTVGGKPQMGPRQVF*APLGLPPSGVTLAL
Trigger: AAGAGCCAAAGTCACACCTGAAGGAGGAAGACCCAGAGGAGCCCAGAAAACCTGCCTCGGCCCCATCTGAGGCTTGCCGCCGACAGTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000259698.9
ENST00000378023.8
ENST00000510784.8
ENST00000538035.6
ENST00000540914.5
ENST00000613507.4
ENST00000643623.1
ENST00000643898.2
ENST00000644411.1
ENST00000644621.1
ENST00000645100.1
ENST00000647136.1
CDS CCA 90 bp AGGGAGGTGGAGAAGGAGGAGGAGGTCTTTCATGGACGGTTGAGCTaGCGCCTCCGGATCCTGTCCCTCCATGGCCTGTTTCTGATCCAG +
Preference number: 5 (lower is better)
Translates to: REVEKEEEVFHGRLS*RLRILSLHGLFLIQ
Trigger: CTGGATCAGAAACAGGCCATGGAGGGACAGGATCCGGAGGCGCCAGCTCAACCGTCCATGAAAGACCTCCTCCTCCTTCTCCACCTCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606385.1
CDS GCA 90 bp CTCAGCAGTCACACTGCCGACCGAGGTGATTTCCTTTCCTTGGGTTaGCCAAGCCCTCTGGAGGGCAGCTTCCGCATCTGCCCTGAAGAA +
Preference number: 5 (lower is better)
Translates to: LSSHTADRGDFLSLG*PSPLEGSFRICPEE
Trigger: TTCTTCAGGGCAGATGCGGAAGCTGCCCTCCAGAGGGCTTGGGCAACCCAAGGAAAGGAAATCACCTCGGTCGGCAGTGTGACTGCTGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613507.4
CDS CCA 90 bp ACGACGACGGCTCCTTGTCATGTCAGGGGCACACTCAGGGTTCTCTaGCATATAAAAGCCTCCGCACCAATGCAATGCCCGGAGCTGCCC +
Preference number: 5 (lower is better)
Translates to: TTTAPCHVRGTLRVL*HIKASAPMQCPELP
Trigger: GGGCAGCTCCGGGCATTGCATTGGTGCGGAGGCTTTTATATGCCAGAGAACCCTGAGTGTGCCCCTGACATGACAAGGAGCCGTCGTCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259698.9
ENST00000644411.1
ENST00000644621.1
CDS CCA 90 bp GTGCCTGACGATGGTGATGTCCAGGCTCTCGTTGCCTGTGGTCAGTaGGAGAGGACTTCCTGCCACACTGGTCCCAACTCCTGTGTCTTC +
Preference number: 5 (lower is better)
Translates to: VPDDGDVQALVACGQ*ERTSCHTGPNSCVF
Trigger: GAAGACACAGGAGTTGGGACCAGTGTGGCAGGAAGTCCTCTCCCACTGACCACAGGCAACGAGAGCCTGGACATCACCATCGTCAGGCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259698.9
ENST00000463828.1
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CAA 90 bp GCCTCAAAGGGAACAAGTCCCACCACTTCCCTGACCAGGCCCTGGCATCATGGGAAGAAGGAGTGGTCTTaGAAGGTGGGCGTTTCCGGG +
Preference number: 5 (lower is better)
Translates to: ASKGTSPTTSLTRPWHHGKKEWS*KVGVSG
Trigger: CCCGGAAACGCCCACCTTCAAAGACCACTCCTTCTT...CCCATGATGCCAGGGCCTGGTCAGGGAAGTGGTGGGACTTGTTCCCTTTGAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR CAA 90 bp GGCATCATGGGAGCAATCCCATTCTCTGGCCTGGAGCATTCTATAATGCTGGCCGACAGCCGCCTGGGCTaGTCTGGGGAAGGATGCAGC +
Preference number: 5 (lower is better)
Translates to: GIMGAIPFSGLEHSIMLADSRLG*SGEGCS
Trigger: GCTGCATCCTTCCCCAGACAAGCCCAGGCGGCTGTC...GGCCAGCATTATAGAATGCTCCAGGCCAGAGAATGGGATTGCTCCCATGATGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644411.1
CDS-3UTR CAA 90 bp GTGATTTCCCTGGGGGCAGTAACCACCCCTCAGGATGTCCTTCTTTCTAATCCCAGGGCGCAGTCCCCGTaGGGCAGGTCACTGAAGCTG +
Preference number: 5 (lower is better)
Translates to: VISLGAVTTPQDVLLSNPRAQSP*GRSLKL
Trigger: CAGCTTCAGTGACCTGCCCAACGGGGACTGCGCCCT...GGGATTAGAAAGAAGGACATCCTGAGGGGTGGTTACTGCCCCCAGGGAAATCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CAA 90 bp AGAATGAATGCCTTGGGCATGACAAGAAGCAGCCCTGCTTCCTCTGGAGCTCTGAGGGCGCAGTCCCCGTaGGGCAGGTCACTGAAGCTG +
Preference number: 5 (lower is better)
Translates to: RMNALGMTRSSPASSGALRAQSP*GRSLKL
Trigger: CAGCTTCAGTGACCTGCCCAACGGGGACTGCGCCCT...CAGAGCTCCAGAGGAAGCAGGGCTGCTTCTTGTCATGCCCAAGGCATTCATTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000645100.1
ENST00000647136.1
CDS-3UTR CAA 90 bp ACTTCCCTGACCAGGCCCTGGCATCATGGGAGCAATCCCATTCTCTGGCCTGGATCCAGTTCCACAGGCTaGAGCTCAGAGGCCTCCTCA +
Preference number: 5 (lower is better)
Translates to: TSLTRPWHHGSNPILWPGSSSTG*SSEASS
Trigger: TGAGGAGGCCTCTGAGCTCAAGCCTGTGGAACTGGA...TCCAGGCCAGAGAATGGGATTGCTCCCATGATGCCAGGGCCTGGTCAGGGAAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS TCA 90 bp TCCCATTGGGCCCTCCAGGCGAAAAAGACTGGGATCCTACCAACATaGTTTCCGGGAGTCTGGTCGGTAGTCCTTGGCCCGTTCCTCCAC +
Preference number: 5 (lower is better)
Translates to: SHWALQAKKTGILPT*FPGVWSVVLGPFLH
Trigger: GTGGAGGAACGGGCCAAGGACTACCGACCAGACTCCCGGAAATCATGTTGGTAGGATCCCAGTCTTTTTCGCCTGGAGGGCCCAATGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000538035.6
ENST00000643623.1
CDS GCA 90 bp AGACTCTCCCGGGCAGCTTTGCTGGCAGGGGATGTTGCGAAGGCTTaGTTCATTTTGCTGGCACCATCCTGGAGGCGTCGCTGGATACAA +
Preference number: 5 (lower is better)
Translates to: RLSRAALLAGDVAKA*FILLAPSWRRRWIQ
Trigger: TTGTATCCAGCGACGCCTCCAGGATGGTGCCAGCAAAATGAAGCAAGCCTTCGCAACATCCCCTGCCAGCAAAGCTGCCCGGGAGAGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000259698.9
ENST00000378023.8
ENST00000510784.8
ENST00000538035.6
ENST00000540914.5
ENST00000613507.4
ENST00000643623.1
ENST00000643898.2
ENST00000644411.1
ENST00000644621.1
ENST00000645100.1
ENST00000647136.1
CDS CCA 90 bp CACCTGGATCGCCTTTCCTGGAGGCCGCTGAAACCCGCAAAGGACTaGCTTCTAATGATCCCATTGGGCCCTCCAGGCGAAAAAGACTGG +
Preference number: 5 (lower is better)
Translates to: HLDRLSWRPLKPAKD*LLMIPLGPPGEKDW
Trigger: CCAGTCTTTTTCGCCTGGAGGGCCCAATGGGATCATTAGAAGCCAGTCCTTTGCGGGTTTCAGCGGCCTCCAGGAAAGGCGATCCAGGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000259698.9
ENST00000378023.8
ENST00000510784.8
ENST00000538035.6
ENST00000540914.5
ENST00000613507.4
ENST00000643623.1
ENST00000643898.2
ENST00000644411.1
ENST00000644621.1
ENST00000645100.1
ENST00000647136.1
ENST00000647309.1
CDS CCA 90 bp CTGGGCTCCTCTGGGTCTTCCTCCTTCAGGTGTGACTTTGGCTCTTaGCCTTCTCCCAGGGAGTTCCTGGAAGATGCTGAGCTGGTGTCA +
Preference number: 5 (lower is better)
Translates to: LGSSGSSSFRCDFGS*PSPREFLEDAELVS
Trigger: TGACACCAGCTCAGCATCTTCCAGGAACTCCCTGGGAGAAGGCCAAGAGCCAAAGTCACACCTGAAGGAGGAAGACCCAGAGGAGCCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000259698.9
ENST00000378023.8
ENST00000510784.8
ENST00000538035.6
ENST00000540914.5
ENST00000613507.4
ENST00000643623.1
ENST00000643898.2
ENST00000644411.1
ENST00000644621.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR CAA 90 bp ACTTCCCTGACCAGGCCCTGGCATCATGGGAGCAATCCCATTCTCTGGCCTGGAAAGAAGGAGTGGTCTTaGAAGGTGGGCGTTTCCGGG +
Preference number: 5 (lower is better)
Translates to: TSLTRPWHHGSNPILWPGKKEWS*KVGVSG
Trigger: CCCGGAAACGCCCACCTTCAAAGACCACTCCTTCTT...TCCAGGCCAGAGAATGGGATTGCTCCCATGATGCCAGGGCCTGGTCAGGGAAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR CAA 90 bp GCAGCCCTGCTTCCTCTGGAGCTCTGCCTCAAAGGGAACAAGTCCCACCACTTCCCTTCAGGTGTGACTTaGGCTCTTGGCCTTCTCCCA +
Preference number: 5 (lower is better)
Translates to: AALLPLELCLKGNKSHHFPSGVT*ALGLLP
Trigger: TGGGAGAAGGCCAAGAGCCAAAGTCACACCTGAAGG...GAAGTGGTGGGACTTGTTCCCTTTGAGGCAGAGCTCCAGAGGAAGCAGGGCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR CAA 90 bp AGAAGCAGCCCTGCTTCCTCTGGAGCTCTGCCTCAAAGGGAACAAGTCCCACCATCCAGTTCCACAGGCTaGAGCTCAGAGGCCTCCTCA +
Preference number: 5 (lower is better)
Translates to: RSSPASSGALPQREQVPPSSSTG*SSEASS
Trigger: TGAGGAGGCCTCTGAGCTCAAGCCTGTGGAACTGGA...TGGTGGGACTTGTTCCCTTTGAGGCAGAGCTCCAGAGGAAGCAGGGCTGCTTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR CAA 90 bp GTGATTTCCCTGGGGGCAGTAACCACCCCTCAGGATGTCCTTCTTTCTAATCCCTGCTGGGCCAGGAGGTaGCTGGGAGCAAGGTCACTC +
Preference number: 5 (lower is better)
Translates to: VISLGAVTTPQDVLLSNPCWARR*LGARSL
Trigger: GAGTGACCTTGCTCCCAGCAACCTCCTGGCCCAGCA...GGGATTAGAAAGAAGGACATCCTGAGGGGTGGTTACTGCCCCCAGGGAAATCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS TCA 90 bp TCCCATTGGGCCCTCCAGGCGAAAAAGACTGGGATCCTACCAACATaGTTTCCGGGAGTCTGGTCGGTAGTCCTAACGACGACGGCTCCT +
Preference number: 5 (lower is better)
Translates to: SHWALQAKKTGILPT*FPGVWSVVLTTTAP
Trigger: AGGAGCCGTCGTCGTTAGGACTACCGACCAGACTCCCGGAAATCATGTTGGTAGGATCCCAGTCTTTTTCGCCTGGAGGGCCCAATGGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000644411.1
ENST00000644621.1
ENST00000647136.1
CDS CCA 90 bp CTGCCGACCGAGGTGATTTCCTTTCCTTGGGTTGCCCAAGCCCTCTaGAGGGCAGCTTCCGCATCTGCCCTGAAGAAAGCAGTTTCATTC +
Preference number: 5 (lower is better)
Translates to: LPTEVISFPWVAQAL*RAASASALKKAVSF
Trigger: GAATGAAACTGCTTTCTTCAGGGCAGATGCGGAAGCTGCCCTCCAGAGGGCTTGGGCAACCCAAGGAAAGGAAATCACCTCGGTCGGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613507.4
CDS-3UTR CAA 90 bp AAATGGCACAATATCTGGGACTGGTTGCAGAAGAATCCAGAGGGAAGTCAGCAGCCTGAGCTGGCTCACTaGGGTGAAGGGGACCCCGGG +
Preference number: 5 (lower is better)
Translates to: KWHNIWDWLQKNPEGSQQPELAH*GEGDPG
Trigger: CCCGGGGTCCCCTTCACCCAAGTGAGCCAGCTCAGG...CTGCTGACTTCCCTCTGGATTCTTCTGCAACCAGTCCCAGATATTGTGCCATTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644621.1
CDS-3UTR CAA 90 bp ACTTCCCTGACCAGGCCCTGGCATCATGGGAGCAATCCCATTCTCTGGCCTGGAAAGGCTTGCTTCATTTaGCTGGCACCATCCTGGAGG +
Preference number: 5 (lower is better)
Translates to: TSLTRPWHHGSNPILWPGKACFI*LAPSWR
Trigger: CCTCCAGGATGGTGCCAGCAAAATGAAGCAAGCCTT...TCCAGGCCAGAGAATGGGATTGCTCCCATGATGCCAGGGCCTGGTCAGGGAAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR CAA 90 bp GCAGCCCTGCTTCCTCTGGAGCTCTGCCTCAAAGGGAACAAGTCCCACCACTTCGGATGTTGCGAAGGCTaGCTTCATTTTGCTGGCACC +
Preference number: 5 (lower is better)
Translates to: AALLPLELCLKGNKSHHFGCCEG*LHFAGT
Trigger: GGTGCCAGCAAAATGAAGCAAGCCTTCGCAACATCC...GAAGTGGTGGGACTTGTTCCCTTTGAGGCAGAGCTCCAGAGGAAGCAGGGCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR CAA 90 bp CAGCCCTGCTTCCTCTGGAGCTCTGCCTCAAAGGGAACAAGTCCCACCACTTCCTGCTGGCAGGGGATGTaGCGAAGGCTTGCTTCATTT +
Preference number: 5 (lower is better)
Translates to: QPCFLWSSASKGTSPTTSCWQGM*RRLASF
Trigger: AAATGAAGCAAGCCTTCGCAACATCCCCTGCCAGCA...GGAAGTGGTGGGACTTGTTCCCTTTGAGGCAGAGCTCCAGAGGAAGCAGGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR CAA 90 bp GCCTCAAAGGGAACAAGTCCCACCACTTCCCTGACCAGGCCCTGGCATCATGGGTCCTTGAAGCTCCGATaGATCTCTGTCAGACTCTCC +
Preference number: 5 (lower is better)
Translates to: ASKGTSPTTSLTRPWHHGSLKLR*ISVRLS
Trigger: GGAGAGTCTGACAGAGATCAATCGGAGCTTCAAGGA...CCCATGATGCCAGGGCCTGGTCAGGGAAGTGGTGGGACTTGTTCCCTTTGAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR CAA 90 bp CAGCCCTGCTTCCTCTGGAGCTCTGCCTCAAAGGGAACAAGTCCCACCACTTCCGCTGCAAACAGCTCTTaGGTCTCACAGGTCACGCTA +
Preference number: 5 (lower is better)
Translates to: QPCFLWSSASKGTSPTTSAANSS*VSQVTL
Trigger: TAGCGTGACCTGTGAGACCAAAGAGCTGTTTGCAGC...GGAAGTGGTGGGACTTGTTCCCTTTGAGGCAGAGCTCCAGAGGAAGCAGGGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR CAA 90 bp ATGTTTGAACTATTTGGCCAGGGAATCCTACCAGTGAGTGATTTCCCTGGGGGCGACAGCCGCCTGGGCTaGTCTGGGGAAGGATGCAGC +
Preference number: 5 (lower is better)
Translates to: MFELFGQGILPVSDFPGGDSRLG*SGEGCS
Trigger: GCTGCATCCTTCCCCAGACAAGCCCAGGCGGCTGTC...GCCCCCAGGGAAATCACTCACTGGTAGGATTCCCTGGCCAAATAGTTCAAACAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000259698.9
ENST00000613507.4
CDS-3UTR CAA 90 bp ATGTTTGAACTATTTGGCCAGGGAATCCTACCAGTGAGTGATTTCCCTGGGGGCAGCTCTAGCACGGCCTaGGGACTCGGCCTGAGGGAG +
Preference number: 5 (lower is better)
Translates to: MFELFGQGILPVSDFPGGSSSTA*GLGLRE
Trigger: CTCCCTCAGGCCGAGTCCCAAGGCCGTGCTAGAGCT...GCCCCCAGGGAAATCACTCACTGGTAGGATTCCCTGGCCAAATAGTTCAAACAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000259698.9
ENST00000613507.4
CDS-3UTR CAA 90 bp AGAAGCAGCCCTGCTTCCTCTGGAGCTCTGCCTCAAAGGGAACAAGTCCCACCACCTTCAGGTGTGACTTaGGCTCTTGGCCTTCTCCCA +
Preference number: 5 (lower is better)
Translates to: RSSPASSGALPQREQVPPPSGVT*ALGLLP
Trigger: TGGGAGAAGGCCAAGAGCCAAAGTCACACCTGAAGG...TGGTGGGACTTGTTCCCTTTGAGGCAGAGCTCCAGAGGAAGCAGGGCTGCTTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR CAA 90 bp AGCAGCCCTGCTTCCTCTGGAGCTCTGCCTCAAAGGGAACAAGTCCCACCACTTAAGGTAGGAAGGGCCTaGCAGGGATCTGTCTCTGAC +
Preference number: 5 (lower is better)
Translates to: SSPASSGALPQREQVPPLKVGRA*QGSVSD
Trigger: GTCAGAGACAGATCCCTGCAAGGCCCTTCCTACCTT...AAGTGGTGGGACTTGTTCCCTTTGAGGCAGAGCTCCAGAGGAAGCAGGGCTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR CAA 90 bp CAAGAAGCAGCCCTGCTTCCTCTGGAGCTCTGCCTCAAAGGGAACAAGTCCCACAAGGTAGGAAGGGCCTaGCAGGGATCTGTCTCTGAC +
Preference number: 5 (lower is better)
Translates to: QEAALLPLELCLKGNKSHKVGRA*QGSVSD
Trigger: GTCAGAGACAGATCCCTGCAAGGCCCTTCCTACCTT...GTGGGACTTGTTCCCTTTGAGGCAGAGCTCCAGAGGAAGCAGGGCTGCTTCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS TCA 90 bp CATGGACATTCTCCTCTGAAGGGCTGCTGCCTTGTTCCCAGCGCCTaGGGATGCGGTCATGTCCTCCACGTCAAATGGATACCAGGTGAT +
Preference number: 5 (lower is better)
Translates to: HGHSPLKGCCLVPSA*GCGHVLHVKWIPGD
Trigger: ATCACCTGGTATCCATTTGACGTGGAGGACATGACCGCATCCTCAGGCGCTGGGAACAAGGCAGCAGCCCTTCAGAGGAGAATGTCCATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000259698.9
ENST00000378023.8
ENST00000510784.8
ENST00000538035.6
ENST00000540914.5
ENST00000613507.4
ENST00000643623.1
ENST00000643898.2
ENST00000644411.1
ENST00000644621.1
ENST00000645100.1
ENST00000647136.1
CDS GCA 90 bp GACTCTTGCAGAAGTGCTTCTGCAACATCATTCTCAAGGAACAGGTaGTCAGCCCCAGCACCTGAGGACTGTCGGCGGCAAGCCTCAGAT +
Preference number: 5 (lower is better)
Translates to: DSCRSASATSFSRNR*SAPAPEDCRRQASD
Trigger: ATCTGAGGCTTGCCGCCGACAGTCCTCAGGTGCTGGGGCTGAGCACCTGTTCCTTGAGAATGATGTTGCAGAAGCACTTCTGCAAGAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000259698.9
ENST00000378023.8
ENST00000510784.8
ENST00000538035.6
ENST00000540914.5
ENST00000613507.4
ENST00000643623.1
ENST00000643898.2
ENST00000644411.1
ENST00000644621.1
ENST00000645100.1
ENST00000647136.1
CDS CCA 90 bp CCTTCAGGTGTGACTTTGGCTCTTGGCCTTCTCCCAGGGAGTTCCTaGAAGATGCTGAGCTGGTGTCATCCATACCCTCATTCTGGGAGG +
Preference number: 5 (lower is better)
Translates to: PSGVTLALGLLPGSS*KMLSWCHPYPHSGR
Trigger: CCTCCCAGAATGAGGGTATGGATGACACCAGCTCAGCATCTTCCAGGAACTCCCTGGGAGAAGGCCAAGAGCCAAAGTCACACCTGAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000259698.9
ENST00000378023.8
ENST00000510784.8
ENST00000538035.6
ENST00000540914.5
ENST00000613507.4
ENST00000643623.1
ENST00000643898.2
ENST00000644411.1
ENST00000644621.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR CAA 90 bp ACTTCCCTGACCAGGCCCTGGCATCATGGGAGCAATCCCATTCTCTGGCCTGGACTTCTAATGATCCCATaGGGCCCTCCAGGCGAAAAA +
Preference number: 5 (lower is better)
Translates to: TSLTRPWHHGSNPILWPGLLMIP*GPPGEK
Trigger: TTTTTCGCCTGGAGGGCCCAATGGGATCATTAGAAG...TCCAGGCCAGAGAATGGGATTGCTCCCATGATGCCAGGGCCTGGTCAGGGAAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR CAA 90 bp TGCTTCCTCTGGAGCTCTGCCTCAAAGGGAACAAGTCCCACCACTTCCCTGACCGGATGTTGCGAAGGCTaGCTTCATTTTGCTGGCACC +
Preference number: 5 (lower is better)
Translates to: CFLWSSASKGTSPTTSLTGCCEG*LHFAGT
Trigger: GGTGCCAGCAAAATGAAGCAAGCCTTCGCAACATCC...GGTCAGGGAAGTGGTGGGACTTGTTCCCTTTGAGGCAGAGCTCCAGAGGAAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR CAA 90 bp AGCAGCCCTGCTTCCTCTGGAGCTCTGCCTCAAAGGGAACAAGTCCCACCACTTGGATGTTGCGAAGGCTaGCTTCATTTTGCTGGCACC +
Preference number: 5 (lower is better)
Translates to: SSPASSGALPQREQVPPLGCCEG*LHFAGT
Trigger: GGTGCCAGCAAAATGAAGCAAGCCTTCGCAACATCC...AAGTGGTGGGACTTGTTCCCTTTGAGGCAGAGCTCCAGAGGAAGCAGGGCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR CAA 90 bp AGAAGCAGCCCTGCTTCCTCTGGAGCTCTGCCTCAAAGGGAACAAGTCCCACCAGGATGTTGCGAAGGCTaGCTTCATTTTGCTGGCACC +
Preference number: 5 (lower is better)
Translates to: RSSPASSGALPQREQVPPGCCEG*LHFAGT
Trigger: GGTGCCAGCAAAATGAAGCAAGCCTTCGCAACATCC...TGGTGGGACTTGTTCCCTTTGAGGCAGAGCTCCAGAGGAAGCAGGGCTGCTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR CAA 90 bp AAGGGAACAAGTCCCACCACTTCCCTGACCAGGCCCTGGCATCATGGGAGCAATGCTGCAAACAGCTCTTaGGTCTCACAGGTCACGCTA +
Preference number: 5 (lower is better)
Translates to: KGTSPTTSLTRPWHHGSNAANSS*VSQVTL
Trigger: TAGCGTGACCTGTGAGACCAAAGAGCTGTTTGCAGC...ATTGCTCCCATGATGCCAGGGCCTGGTCAGGGAAGTGGTGGGACTTGTTCCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR CAA 90 bp ATTCAAGAGGATGCTGGGGTGGGTCGAATGGGACAAATTCTGCAAGTTAGAAGCAGGGCGCAGTCCCCGTaGGGCAGGTCACTGAAGCTG +
Preference number: 5 (lower is better)
Translates to: IQEDAGVGRMGQILQVRSRAQSP*GRSLKL
Trigger: CAGCTTCAGTGACCTGCCCAACGGGGACTGCGCCCT...GCTTCTAACTTGCAGAATTTGTCCCATTCGACCCACCCCAGCATCCTCTTGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS GCA 90 bp GGGCAGCTTTGCTGGCAGGGGATGTTGCGAAGGCTTGCTTCATTTTaGTGGCACCATCCTGGAGGCGTCGCTGGATACAATAAGCTTCAT +
Preference number: 5 (lower is better)
Translates to: GQLCWQGMLRRLASF*WHHPGGVAGYNKLH
Trigger: ATGAAGCTTATTGTATCCAGCGACGCCTCCAGGATGGTGCCAGCAAAATGAAGCAAGCCTTCGCAACATCCCCTGCCAGCAAAGCTGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000259698.9
ENST00000378023.8
ENST00000510784.8
ENST00000538035.6
ENST00000540914.5
ENST00000613507.4
ENST00000643623.1
ENST00000643898.2
ENST00000644411.1
ENST00000644621.1
ENST00000645100.1
ENST00000647136.1
CDS GCA 90 bp TTCCACAGGCTTGAGCTCAGAGGCCTCCTCAGACTCTTGCAGAAGTaGTTCTGCAACATCATTCTCAAGGAACAGGTGCTCAGCCCCAGC +
Preference number: 5 (lower is better)
Translates to: FHRLELRGLLRLLQK*FCNIILKEQVLSPS
Trigger: GCTGGGGCTGAGCACCTGTTCCTTGAGAATGATGTTGCAGAAGCACTTCTGCAAGAGTCTGAGGAGGCCTCTGAGCTCAAGCCTGTGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000259698.9
ENST00000378023.8
ENST00000510784.8
ENST00000538035.6
ENST00000540914.5
ENST00000613507.4
ENST00000643623.1
ENST00000643898.2
ENST00000644411.1
ENST00000644621.1
ENST00000645100.1
ENST00000647136.1
CDS CCA 90 bp AGTGTCTTGCAAGGCACTCAAGACAGACAGCCGCCTGGGCTTGTCTaGGGAAGGATGCAGCCACCTAAAGAAGGAGTGGTCTTTGAAGGT +
Preference number: 5 (lower is better)
Translates to: SVLQGTQDRQPPGLV*GRMQPPKEGVVFEG
Trigger: ACCTTCAAAGACCACTCCTTCTTTAGGTGGCTGCATCCTTCCCCAGACAAGCCCAGGCGGCTGTCTGTCTTGAGTGCCTTGCAAGACACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259698.9
ENST00000613507.4
ENST00000644411.1
CDS-3UTR CAA 90 bp TCTGGCCTGGAGCATTCTATAATGCTGGCCACATGCAGAAACATTACAAGCAAACCTGAGCTGGCTCACTaGGGTGAAGGGGACCCCGGG +
Preference number: 5 (lower is better)
Translates to: SGLEHSIMLATCRNITSKPELAH*GEGDPG
Trigger: CCCGGGGTCCCCTTCACCCAAGTGAGCCAGCTCAGG...TTTGCTTGTAATGTTTCTGCATGTGGCCAGCATTATAGAATGCTCCAGGCCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644411.1
CDS-3UTR CAA 90 bp AGAAGCAGCCCTGCTTCCTCTGGAGCTCTGCCTCAAAGGGAACAAGTCCCACCATCCTTGAAGCTCCGATaGATCTCTGTCAGACTCTCC +
Preference number: 5 (lower is better)
Translates to: RSSPASSGALPQREQVPPSLKLR*ISVRLS
Trigger: GGAGAGTCTGACAGAGATCAATCGGAGCTTCAAGGA...TGGTGGGACTTGTTCCCTTTGAGGCAGAGCTCCAGAGGAAGCAGGGCTGCTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR CAA 90 bp AAGGGAACAAGTCCCACCACTTCCCTGACCAGGCCCTGGCATCATGGGAGCAATTCCTTGAAGCTCCGATaGATCTCTGTCAGACTCTCC +
Preference number: 5 (lower is better)
Translates to: KGTSPTTSLTRPWHHGSNSLKLR*ISVRLS
Trigger: GGAGAGTCTGACAGAGATCAATCGGAGCTTCAAGGA...ATTGCTCCCATGATGCCAGGGCCTGGTCAGGGAAGTGGTGGGACTTGTTCCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR CAA 90 bp GCCTCAAAGGGAACAAGTCCCACCACTTCCCTGACCAGGCCCTGGCATCATGGGTTCTCTGTGTACTCCTaGAAGCTCCGATTGATCTCT +
Preference number: 5 (lower is better)
Translates to: ASKGTSPTTSLTRPWHHGFSVYS*KLRLIS
Trigger: AGAGATCAATCGGAGCTTCAAGGAGTACACAGAGAA...CCCATGATGCCAGGGCCTGGTCAGGGAAGTGGTGGGACTTGTTCCCTTTGAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR CAA 90 bp AGCAGCCCTGCTTCCTCTGGAGCTCTGCCTCAAAGGGAACAAGTCCCACCACTTGCCAGACCTTTCATCTaGATGGAGAATTCTCCCAGC +
Preference number: 5 (lower is better)
Translates to: SSPASSGALPQREQVPPLARPFI*MENSPS
Trigger: GCTGGGAGAATTCTCCATCAAGATGAAAGGTCTGGC...AAGTGGTGGGACTTGTTCCCTTTGAGGCAGAGCTCCAGAGGAAGCAGGGCTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR CAA 90 bp TGCTTCCTCTGGAGCTCTGCCTCAAAGGGAACAAGTCCCACCACTTCCCTGACCTTGAGCTCCGTGACCTaGATGGAGATGAACCCAACT +
Preference number: 5 (lower is better)
Translates to: CFLWSSASKGTSPTTSLTLSSVT*MEMNPT
Trigger: AGTTGGGTTCATCTCCATCAAGGTCACGGAGCTCAA...GGTCAGGGAAGTGGTGGGACTTGTTCCCTTTGAGGCAGAGCTCCAGAGGAAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR CAA 90 bp CAAGAAGCAGCCCTGCTTCCTCTGGAGCTCTGCCTCAAAGGGAACAAGTCCCACTTGAGCTCCGTGACCTaGATGGAGATGAACCCAACT +
Preference number: 5 (lower is better)
Translates to: QEAALLPLELCLKGNKSHLSSVT*MEMNPT
Trigger: AGTTGGGTTCATCTCCATCAAGGTCACGGAGCTCAA...GTGGGACTTGTTCCCTTTGAGGCAGAGCTCCAGAGGAAGCAGGGCTGCTTCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR CAA 90 bp GTGATTTCCCTGGGGGCAGTAACCACCCCTCAGGATGTCCTTCTTTCTAATCCCAAGAAGGAGTGGTCTTaGAAGGTGGGCGTTTCCGGG +
Preference number: 5 (lower is better)
Translates to: VISLGAVTTPQDVLLSNPKKEWS*KVGVSG
Trigger: CCCGGAAACGCCCACCTTCAAAGACCACTCCTTCTT...GGGATTAGAAAGAAGGACATCCTGAGGGGTGGTTACTGCCCCCAGGGAAATCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CAA 90 bp GCAGCCCTGCTTCCTCTGGAGCTCTGCCTCAAAGGGAACAAGTCCCACCACTTCGGCAAAGAAAGTGTCTaGCAAGGCACTCAAGACAGA +
Preference number: 5 (lower is better)
Translates to: AALLPLELCLKGNKSHHFGKESV*QGTQDR
Trigger: TCTGTCTTGAGTGCCTTGCAAGACACTTTCTTTGCC...GAAGTGGTGGGACTTGTTCCCTTTGAGGCAGAGCTCCAGAGGAAGCAGGGCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644411.1
CDS-3UTR CAA 90 bp CTCCACTCCTACTCCATTAGGATTTCTCTGACTTCTAGGTTCCTCCACCTCAAAAGGGCGCAGTCCCCGTaGGGCAGGTCACTGAAGCTG +
Preference number: 5 (lower is better)
Translates to: LHSYSIRISLTSRFLHLKRAQSP*GRSLKL
Trigger: CAGCTTCAGTGACCTGCCCAACGGGGACTGCGCCCT...TTTGAGGTGGAGGAACCTAGAAGTCAGAGAAATCCTAATGGAGTAGGAGTGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CAA 90 bp GGCATCATGGGAGCAATCCCATTCTCTGGCCTGGAGCATTCTATAATGCTGGCCCCTTCAGGTGTGACTTaGGCTCTTGGCCTTCTCCCA +
Preference number: 5 (lower is better)
Translates to: GIMGAIPFSGLEHSIMLAPSGVT*ALGLLP
Trigger: TGGGAGAAGGCCAAGAGCCAAAGTCACACCTGAAGG...GGCCAGCATTATAGAATGCTCCAGGCCAGAGAATGGGATTGCTCCCATGATGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR CAA 90 bp GTGATTTCCCTGGGGGCAGTAACCACCCCTCAGGATGTCCTTCTTTCTAATCCCTTGCCCAGGTTGGTCTaGAACCTCCTGGGCTTAAGC +
Preference number: 5 (lower is better)
Translates to: VISLGAVTTPQDVLLSNPLPRLV*NLLGLS
Trigger: GCTTAAGCCCAGGAGGTTCAAGACCAACCTGGGCAA...GGGATTAGAAAGAAGGACATCCTGAGGGGTGGTTACTGCCCCCAGGGAAATCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CAA 90 bp AGGGCCTTGCAGGGATCTGTCTCTGACACTCAAGATGGCACAAAAGCACATGGGAAGGTAGGAAGGGCCTaGCAGGGATCTGTCTCTGAC +
Preference number: 5 (lower is better)
Translates to: RALQGSVSDTQDGTKAHGKVGRA*QGSVSD
Trigger: GTCAGAGACAGATCCCTGCAAGGCCCTTCCTACCTT...CCCATGTGCTTTTGTGCCATCTTGAGTGTCAGAGACAGATCCCTGCAAGGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR CAA 90 bp GGCATCATGGGAGCAATCCCATTCTCTGGCCTGGAGCATTCTATAATGCTGGCCAAGGTAGGAAGGGCCTaGCAGGGATCTGTCTCTGAC +
Preference number: 5 (lower is better)
Translates to: GIMGAIPFSGLEHSIMLAKVGRA*QGSVSD
Trigger: GTCAGAGACAGATCCCTGCAAGGCCCTTCCTACCTT...GGCCAGCATTATAGAATGCTCCAGGCCAGAGAATGGGATTGCTCCCATGATGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS TCA 90 bp ACCTTCCTCAAAGCTACGCGAAGCAGCTCAGCAAGGAAGGCAGTTTaGGCGAGTTACTTCCCCAGAGAGAGAAGGACAAACAGCCTCCTC +
Preference number: 5 (lower is better)
Translates to: TFLKATRSSSARKAV*ASYFPRERRTNSLL
Trigger: GAGGAGGCTGTTTGTCCTTCTCTCTCTGGGGAAGTAACTCGCTCAAACTGCCTTCCTTGCTGAGCTGCTTCGCGTAGCTTTGAGGAAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378023.8
ENST00000540914.5
CDS GCA 90 bp TCTGTGGCCATTGGCACCTCTGCAGATGTGAGCCTCTTGACCAGCTaGTTTGTGATGTTTCCTTCCGAAGTGTCCAGTTCCACAGGCTTG +
Preference number: 5 (lower is better)
Translates to: SVAIGTSADVSLLTS*FVMFPSEVSSSTGL
Trigger: CAAGCCTGTGGAACTGGACACTTCGGAAGGAAACATCACAAAGCAGCTGGTCAAGAGGCTCACATCTGCAGAGGTGCCAATGGCCACAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000259698.9
ENST00000378023.8
ENST00000473070.1
ENST00000510784.8
ENST00000538035.6
ENST00000540914.5
ENST00000613507.4
ENST00000643623.1
ENST00000643898.2
ENST00000644411.1
ENST00000644621.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR CAA 90 bp GGCCATGAGTTGATCACTGAGGAGGTTGAGGGATGGGCACACTGGGATCCATTAAAGGCTTGCTTCATTTaGCTGGCACCATCCTGGAGG +
Preference number: 5 (lower is better)
Translates to: GHELITEEVEGWAHWDPLKACFI*LAPSWR
Trigger: CCTCCAGGATGGTGCCAGCAAAATGAAGCAAGCCTT...TAATGGATCCCAGTGTGCCCATCCCTCAACCTCCTCAGTGATCAACTCATGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR CAA 90 bp AGAATGAATGCCTTGGGCATGACAAGAAGCAGCCCTGCTTCCTCTGGAGCTCTGAAGGCTTGCTTCATTTaGCTGGCACCATCCTGGAGG +
Preference number: 5 (lower is better)
Translates to: RMNALGMTRSSPASSGALKACFI*LAPSWR
Trigger: CCTCCAGGATGGTGCCAGCAAAATGAAGCAAGCCTT...CAGAGCTCCAGAGGAAGCAGGGCTGCTTCTTGTCATGCCCAAGGCATTCATTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000645100.1
ENST00000647136.1
CDS-3UTR CAA 90 bp GGCATCATGGGAGCAATCCCATTCTCTGGCCTGGAGCATTCTATAATGCTGGCCTGCTGGCAGGGGATGTaGCGAAGGCTTGCTTCATTT +
Preference number: 5 (lower is better)
Translates to: GIMGAIPFSGLEHSIMLACWQGM*RRLASF
Trigger: AAATGAAGCAAGCCTTCGCAACATCCCCTGCCAGCA...GGCCAGCATTATAGAATGCTCCAGGCCAGAGAATGGGATTGCTCCCATGATGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR CAA 90 bp ACTTCCCTGACCAGGCCCTGGCATCATGGGAGCAATCCCATTCTCTGGCCTGGACCATCCCAGCTCTGCTaGCCATTTACTTCTATTTTG +
Preference number: 5 (lower is better)
Translates to: TSLTRPWHHGSNPILWPGPSQLC*PFTSIL
Trigger: CAAAATAGAAGTAAATGGCAAGCAGAGCTGGGATGG...TCCAGGCCAGAGAATGGGATTGCTCCCATGATGCCAGGGCCTGGTCAGGGAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR CAA 90 bp GCAGCCCTGCTTCCTCTGGAGCTCTGCCTCAAAGGGAACAAGTCCCACCACTTCCCATCCCAGCTCTGCTaGCCATTTACTTCTATTTTG +
Preference number: 5 (lower is better)
Translates to: AALLPLELCLKGNKSHHFPSQLC*PFTSIL
Trigger: CAAAATAGAAGTAAATGGCAAGCAGAGCTGGGATGG...GAAGTGGTGGGACTTGTTCCCTTTGAGGCAGAGCTCCAGAGGAAGCAGGGCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR CAA 90 bp GAACTATTTGGCCAGGGAATCCTACCAGTGAGTGATTTCCCTGGGGGCAGTAACAAGAAGGAGTGGTCTTaGAAGGTGGGCGTTTCCGGG +
Preference number: 5 (lower is better)
Translates to: ELFGQGILPVSDFPGGSNKKEWS*KVGVSG
Trigger: CCCGGAAACGCCCACCTTCAAAGACCACTCCTTCTT...GTTACTGCCCCCAGGGAAATCACTCACTGGTAGGATTCCCTGGCCAAATAGTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CAA 90 bp ATGTTTGAACTATTTGGCCAGGGAATCCTACCAGTGAGTGATTTCCCTGGGGGCCGGCTGCGGTGCAGCTaGGCAAAGAAAGTGTCTTGC +
Preference number: 5 (lower is better)
Translates to: MFELFGQGILPVSDFPGGRLRCS*AKKVSC
Trigger: GCAAGACACTTTCTTTGCCAAGCTGCACCGCAGCCG...GCCCCCAGGGAAATCACTCACTGGTAGGATTCCCTGGCCAAATAGTTCAAACAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000259698.9
ENST00000613507.4
CDS-3UTR CAA 90 bp ATAAAATGGCACAATATCTGGGACTGGTTGCAGAAGAATCCAGAGGGAAGTCAGAGGGCGCAGTCCCCGTaGGGCAGGTCACTGAAGCTG +
Preference number: 5 (lower is better)
Translates to: IKWHNIWDWLQKNPEGSQRAQSP*GRSLKL
Trigger: CAGCTTCAGTGACCTGCCCAACGGGGACTGCGCCCT...CTGACTTCCCTCTGGATTCTTCTGCAACCAGTCCCAGATATTGTGCCATTTTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR CAA 90 bp CATGAGTTGATCACTGAGGAGGTTGAGGGATGGGCACACTGGGATCCATTAGAGCCTTCAGGTGTGACTTaGGCTCTTGGCCTTCTCCCA +
Preference number: 5 (lower is better)
Translates to: HELITEEVEGWAHWDPLEPSGVT*ALGLLP
Trigger: TGGGAGAAGGCCAAGAGCCAAAGTCACACCTGAAGG...CTCTAATGGATCCCAGTGTGCCCATCCCTCAACCTCCTCAGTGATCAACTCATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR CAA 90 bp ATGTTTGAACTATTTGGCCAGGGAATCCTACCAGTGAGTGATTTCCCTGGGGGCTCCAGTTCCACAGGCTaGAGCTCAGAGGCCTCCTCA +
Preference number: 5 (lower is better)
Translates to: MFELFGQGILPVSDFPGGSSSTG*SSEASS
Trigger: TGAGGAGGCCTCTGAGCTCAAGCCTGTGGAACTGGA...GCCCCCAGGGAAATCACTCACTGGTAGGATTCCCTGGCCAAATAGTTCAAACAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CAA 90 bp ATCATGGGAGCAATCCCATTCTCTGGCCTGGAGCATTCTATAATGCTGGCCACATCCAGTTCCACAGGCTaGAGCTCAGAGGCCTCCTCA +
Preference number: 5 (lower is better)
Translates to: IMGAIPFSGLEHSIMLATSSSTG*SSEASS
Trigger: TGAGGAGGCCTCTGAGCTCAAGCCTGTGGAACTGGA...TGTGGCCAGCATTATAGAATGCTCCAGGCCAGAGAATGGGATTGCTCCCATGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR CAA 90 bp ATGTTTGAACTATTTGGCCAGGGAATCCTACCAGTGAGTGATTTCCCTGGGGGCCTGAACCATGGAAACTaGCCTGGCCAGCTGGCTCAG +
Preference number: 5 (lower is better)
Translates to: MFELFGQGILPVSDFPGGLNHGN*PGQLAQ
Trigger: CTGAGCCAGCTGGCCAGGCAAGTTTCCATGGTTCAG...GCCCCCAGGGAAATCACTCACTGGTAGGATTCCCTGGCCAAATAGTTCAAACAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CAA 90 bp AACAAGTCCCACCACTTCCCTGACCAGGCCCTGGCATCATGGGAGCAATCCCATAATATCTGGGACTGGTaGCAGAAGAATCCAGAGGGA +
Preference number: 5 (lower is better)
Translates to: NKSHHFPDQALASWEQSHNIWDW*QKNPEG
Trigger: TCCCTCTGGATTCTTCTGCAACCAGTCCCAGATATT...ATGGGATTGCTCCCATGATGCCAGGGCCTGGTCAGGGAAGTGGTGGGACTTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510784.8
ENST00000540914.5
CDS-3UTR CAA 90 bp AAGTGGCAATGTCTTCGGTGTTTTACAAAAGGCGCTAGCTATCTAAGGCATCTGCTGGTCGGTAGTCGGTaGAGCTGGCGCCTCCGGATC +
Preference number: 5 (lower is better)
Translates to: KWQCLRCFTKGASYLRHLLVGSR*SWRLRI
Trigger: GATCCGGAGGCGCCAGCTCAACCGACTACCGACCAG...CAGATGCCTTAGATAGCTAGCGCCTTTTGTAAAACACCGAAGACATTGCCACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510784.8
CDS-3UTR CAA 90 bp GTGATTTCCCTGGGGGCAGTAACCACCCCTCAGGATGTCCTTCTTTCTAATCCCATCCTTCAGTTCTGCTaGCAAAAAGTGCGCGTGCCC +
Preference number: 5 (lower is better)
Translates to: VISLGAVTTPQDVLLSNPILQFC*QKVRVP
Trigger: GGGCACGCGCACTTTTTGCAAGCAGAACTGAAGGAT...GGGATTAGAAAGAAGGACATCCTGAGGGGTGGTTACTGCCCCCAGGGAAATCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000538035.6
CDS-3UTR CAA 90 bp AGGGCCTTGCAGGGATCTGTCTCTGACACTCAAGATGGCACAAAAGCACATGGGGAGCAGCCCTGGAGTTaGTATGCATTCTTGCGAGGT +
Preference number: 5 (lower is better)
Translates to: RALQGSVSDTQDGTKAHGEQPWS*YAFLRG
Trigger: ACCTCGCAAGAATGCATACAAACTCCAGGGCTGCTC...CCCATGTGCTTTTGTGCCATCTTGAGTGTCAGAGACAGATCCCTGCAAGGCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540914.5
CDS TCA 90 bp TCCCATTGGGCCCTCCAGGCGAAAAAGACTGGGATCCTACCAACATaGTTTCCGGGAGTCTGGTCGGTAGTCCCTGCTAATATTTTCTGC +
Preference number: 5 (lower is better)
Translates to: SHWALQAKKTGILPT*FPGVWSVVPANIFC
Trigger: GCAGAAAATATTAGCAGGGACTACCGACCAGACTCCCGGAAATCATGTTGGTAGGATCCCAGTCTTTTTCGCCTGGAGGGCCCAATGGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000645703.1
CDS GCA 90 bp GTGTCCAGTTCCACAGGCTTGAGCTCAGAGGCCTCCTCAGACTCTTaGAGAAGTGCTTCTGCAACATCATTCTCAAGGAACAGGTGCTCA +
Preference number: 5 (lower is better)
Translates to: VSSSTGLSSEASSDS*RSASATSFSRNRCS
Trigger: TGAGCACCTGTTCCTTGAGAATGATGTTGCAGAAGCACTTCTGCAAGAGTCTGAGGAGGCCTCTGAGCTCAAGCCTGTGGAACTGGACAC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000259698.9
ENST00000378023.8
ENST00000510784.8
ENST00000538035.6
ENST00000540914.5
ENST00000613507.4
ENST00000643623.1
ENST00000643898.2
ENST00000644411.1
ENST00000644621.1
ENST00000645100.1
ENST00000647136.1
CDS CCA 90 bp CAGCTTTGCTGGCAGGGGATGTTGCGAAGGCTTGCTTCATTTTGCTaGCACCATCCTGGAGGCGTCGCTGGATACAATAAGCTTCATAGA +
Preference number: 5 (lower is better)
Translates to: QLCWQGMLRRLASFC*HHPGGVAGYNKLHR
Trigger: TCTATGAAGCTTATTGTATCCAGCGACGCCTCCAGGATGGTGCCAGCAAAATGAAGCAAGCCTTCGCAACATCCCCTGCCAGCAAAGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000259698.9
ENST00000378023.8
ENST00000510784.8
ENST00000538035.6
ENST00000540914.5
ENST00000613507.4
ENST00000643623.1
ENST00000643898.2
ENST00000644411.1
ENST00000644621.1
ENST00000645100.1
ENST00000647136.1
CDS CCA 90 bp TCCTGTGTCTTCAGTGAGCGCTTCACTGAGATGCCCCCTGGCTTCTaGGTGAACCGACCTGTAACTATTGAAGGTGGGCAAAACATTAGC +
Preference number: 5 (lower is better)
Translates to: SCVFSERFTEMPPGF*VNRPVTIEGGQNIS
Trigger: GCTAATGTTTTGCCCACCTTCAATAGTTACAGGTCGGTTCACCCAGAAGCCAGGGGGCATCTCAGTGAAGCGCTCACTGAAGACACAGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000463828.1
CDS-3UTR CAA 90 bp AGGGCCTTGCAGGGATCTGTCTCTGACACTCAAGATGGCACAAAAGCACATGGGCTTCTAATGATCCCATaGGGCCCTCCAGGCGAAAAA +
Preference number: 5 (lower is better)
Translates to: RALQGSVSDTQDGTKAHGLLMIP*GPPGEK
Trigger: TTTTTCGCCTGGAGGGCCCAATGGGATCATTAGAAG...CCCATGTGCTTTTGTGCCATCTTGAGTGTCAGAGACAGATCCCTGCAAGGCCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR CAA 90 bp GAACTATTTGGCCAGGGAATCCTACCAGTGAGTGATTTCCCTGGGGGCAGTAACAAGGCTTGCTTCATTTaGCTGGCACCATCCTGGAGG +
Preference number: 5 (lower is better)
Translates to: ELFGQGILPVSDFPGGSNKACFI*LAPSWR
Trigger: CCTCCAGGATGGTGCCAGCAAAATGAAGCAAGCCTT...GTTACTGCCCCCAGGGAAATCACTCACTGGTAGGATTCCCTGGCCAAATAGTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CAA 90 bp CATGAGTTGATCACTGAGGAGGTTGAGGGATGGGCACACTGGGATCCATTAGAGAAGGCTTGCTTCATTTaGCTGGCACCATCCTGGAGG +
Preference number: 5 (lower is better)
Translates to: HELITEEVEGWAHWDPLEKACFI*LAPSWR
Trigger: CCTCCAGGATGGTGCCAGCAAAATGAAGCAAGCCTT...CTCTAATGGATCCCAGTGTGCCCATCCCTCAACCTCCTCAGTGATCAACTCATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR CAA 90 bp GGCATCATGGGAGCAATCCCATTCTCTGGCCTGGAGCATTCTATAATGCTGGCCTCCTTGAAGCTCCGATaGATCTCTGTCAGACTCTCC +
Preference number: 5 (lower is better)
Translates to: GIMGAIPFSGLEHSIMLASLKLR*ISVRLS
Trigger: GGAGAGTCTGACAGAGATCAATCGGAGCTTCAAGGA...GGCCAGCATTATAGAATGCTCCAGGCCAGAGAATGGGATTGCTCCCATGATGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR CAA 90 bp CATGAGTTGATCACTGAGGAGGTTGAGGGATGGGCACACTGGGATCCATTAGAGGCTGCAAACAGCTCTTaGGTCTCACAGGTCACGCTA +
Preference number: 5 (lower is better)
Translates to: HELITEEVEGWAHWDPLEAANSS*VSQVTL
Trigger: TAGCGTGACCTGTGAGACCAAAGAGCTGTTTGCAGC...CTCTAATGGATCCCAGTGTGCCCATCCCTCAACCTCCTCAGTGATCAACTCATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR CAA 90 bp ATGTTTGAACTATTTGGCCAGGGAATCCTACCAGTGAGTGATTTCCCTGGGGGCAAGAAGGAGTGGTCTTaGAAGGTGGGCGTTTCCGGG +
Preference number: 5 (lower is better)
Translates to: MFELFGQGILPVSDFPGGKKEWS*KVGVSG
Trigger: CCCGGAAACGCCCACCTTCAAAGACCACTCCTTCTT...GCCCCCAGGGAAATCACTCACTGGTAGGATTCCCTGGCCAAATAGTTCAAACAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CAA 90 bp GATATGTACACGATAAGTTCACAGTTGAAAGAACCATTTGCCAGAAGCCTGGCAAGCTCTAGCACGGCCTaGGGACTCGGCCTGAGGGAG +
Preference number: 5 (lower is better)
Translates to: DMYTISSQLKEPFARSLASSSTA*GLGLRE
Trigger: CTCCCTCAGGCCGAGTCCCAAGGCCGTGCTAGAGCT...TGCCAGGCTTCTGGCAAATGGTTCTTTCAACTGTGAACTTATCGTGTACATATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259698.9
ENST00000613507.4
CDS-3UTR CAA 90 bp ATGTTTGAACTATTTGGCCAGGGAATCCTACCAGTGAGTGATTTCCCTGGGGGCCCTTCAGGTGTGACTTaGGCTCTTGGCCTTCTCCCA +
Preference number: 5 (lower is better)
Translates to: MFELFGQGILPVSDFPGGPSGVT*ALGLLP
Trigger: TGGGAGAAGGCCAAGAGCCAAAGTCACACCTGAAGG...GCCCCCAGGGAAATCACTCACTGGTAGGATTCCCTGGCCAAATAGTTCAAACAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CAA 90 bp GCCTCAAAGGGAACAAGTCCCACCACTTCCCTGACCAGGCCCTGGCATCATGGGCAAATTCATGACTTCTaGGTTCAGATCCTGAAACTC +
Preference number: 5 (lower is better)
Translates to: ASKGTSPTTSLTRPWHHGQIHDF*VQILKL
Trigger: GAGTTTCAGGATCTGAACCAAGAAGTCATGAATTTG...CCCATGATGCCAGGGCCTGGTCAGGGAAGTGGTGGGACTTGTTCCCTTTGAGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR CAA 90 bp GCCTCAAAGGGAACAAGTCCCACCACTTCCCTGACCAGGCCCTGGCATCATGGGTGTCATCAGGTAGATTaGAAAAGAAGGAGTGGTCTT +
Preference number: 5 (lower is better)
Translates to: ASKGTSPTTSLTRPWHHGCHQVD*KRRSGL
Trigger: AAGACCACTCCTTCTTTTCAAATCTACCTGATGACA...CCCATGATGCCAGGGCCTGGTCAGGGAAGTGGTGGGACTTGTTCCCTTTGAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000645100.1
ENST00000647136.1
CDS-3UTR CAA 90 bp AGAATGAATGCCTTGGGCATGACAAGAAGCAGCCCTGCTTCCTCTGGAGCTCTGGCAAAACAATGCCAGTaGCTATGGGCACAGAGTTGG +
Preference number: 5 (lower is better)
Translates to: RMNALGMTRSSPASSGALAKQCQ*LWAQSW
Trigger: CCAACTCTGTGCCCATAGCAACTGGCATTGTTTTGC...CAGAGCTCCAGAGGAAGCAGGGCTGCTTCTTGTCATGCCCAAGGCATTCATTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000645100.1
ENST00000647136.1
CDS-3UTR CAA 90 bp AGAAGCAGCCCTGCTTCCTCTGGAGCTCTGCCTCAAAGGGAACAAGTCCCACCAAGGAACAAAAGGGTCTaGCAGCTATCCTGGAAGTTA +
Preference number: 5 (lower is better)
Translates to: RSSPASSGALPQREQVPPRNKRV*QLSWKL
Trigger: TAACTTCCAGGATAGCTGCAAGACCCTTTTGTTCCT...TGGTGGGACTTGTTCCCTTTGAGGCAGAGCTCCAGAGGAAGCAGGGCTGCTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510784.8
CDS TCA 90 bp CCAGGGTTCGAAACACTGGGTCTGCAAGTCCTGGATATTCTTTGTTaGCAGTTCTGGCAAAGCTGGCCTCCAGCTGCTTCATCACTCTGT +
Preference number: 5 (lower is better)
Translates to: PGFETLGLQVLDILC*QFWQSWPPAASSLC
Trigger: ACAGAGTGATGAAGCAGCTGGAGGCCAGCTTTGCCAGAACTGTCAACAAAGAATATCCAGGACTTGCAGACCCAGTGTTTCGAACCCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259698.9
ENST00000463828.1
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS TCA 90 bp TCCCATTGGGCCCTCCAGGCGAAAAAGACTGGGATCCTACCAACATaGTTTCCGGGAGTCTGGTCGGTAGTCCTTCACCAAAAACATCAT +
Preference number: 5 (lower is better)
Translates to: SHWALQAKKTGILPT*FPGVWSVVLHQKHH
Trigger: ATGATGTTTTTGGTGAAGGACTACCGACCAGACTCCCGGAAATCATGTTGGTAGGATCCCAGTCTTTTTCGCCTGGAGGGCCCAATGGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000613507.4
ENST00000643898.2
ENST00000645100.1
CDS GCA 90 bp AATCGCGAAGGTAACACCATGGTCCCAACAGAGCGGCCTAAAACCTaGTCATGGCAAAGGAACAAAAGGGTCTTGCAGCTATCCTGGAAG +
Preference number: 5 (lower is better)
Translates to: NREGNTMVPTERPKT*SWQRNKRVLQLSWK
Trigger: CTTCCAGGATAGCTGCAAGACCCTTTTGTTCCTTTGCCATGAGCAGGTTTTAGGCCGCTCTGTTGGGACCATGGTGTTACCTTCGCGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000510784.8
ENST00000606385.1
CDS CCA 90 bp CTCTGTCCGCTGGGCTGTGGTAGACACCAACAGGGCTGCAGCACTTaGTCCAGAATGACAGCAAAGACAGCTTTTTGTGAAATTCTGGTA +
Preference number: 5 (lower is better)
Translates to: LCPLGCGRHQQGCST*SRMTAKTAFCEILV
Trigger: TACCAGAATTTCACAAAAAGCTGTCTTTGCTGTCATTCTGGACCAAGTGCTGCAGCCCTGTTGGTGTCTACCACAGCCCAGCGGACAGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000259698.9
ENST00000463828.1
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CAA 90 bp TCCAAATATTCAAGAGGATGCTGGGGTGGGTCGAATGGGACAAATTCTGCAAGTAACGACGACGGCTCCTaGTCATGTCAGGGGCACACT +
Preference number: 5 (lower is better)
Translates to: SKYSRGCWGGSNGTNSASNDDGS*SCQGHT
Trigger: AGTGTGCCCCTGACATGACAAGGAGCCGTCGTCGTT...ACTTGCAGAATTTGTCCCATTCGACCCACCCCAGCATCCTCTTGAATATTTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000644411.1
ENST00000647136.1
CDS-3UTR CAA 90 bp GTCTTGAACTCTTGGGCTCCAGCAATCCTGGGCTTCCCAAAGTGTTGGGATTACCTTCTAATGATCCCATaGGGCCCTCCAGGCGAAAAA +
Preference number: 5 (lower is better)
Translates to: VLNSWAPAILGFPKCWDYLLMIP*GPPGEK
Trigger: TTTTTCGCCTGGAGGGCCCAATGGGATCATTAGAAG...GTAATCCCAACACTTTGGGAAGCCCAGGATTGCTGGAGCCCAAGAGTTCAAGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000645100.1
ENST00000647136.1
CDS-3UTR CAA 90 bp ATGGGAGCAATCCCATTCTCTGGCCTGGAGCATTCTATAATGCTGGCCACATGCCTTCTAATGATCCCATaGGGCCCTCCAGGCGAAAAA +
Preference number: 5 (lower is better)
Translates to: MGAIPFSGLEHSIMLATCLLMIP*GPPGEK
Trigger: TTTTTCGCCTGGAGGGCCCAATGGGATCATTAGAAG...GCATGTGGCCAGCATTATAGAATGCTCCAGGCCAGAGAATGGGATTGCTCCCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR CAA 90 bp AATGGCACAATATCTGGGACTGGTTGCAGAAGAATCCAGAGGGAAGTCAGCAGGAAGGCTTGCTTCATTTaGCTGGCACCATCCTGGAGG +
Preference number: 5 (lower is better)
Translates to: NGTISGTGCRRIQREVSRKACFI*LAPSWR
Trigger: CCTCCAGGATGGTGCCAGCAAAATGAAGCAAGCCTT...CCTGCTGACTTCCCTCTGGATTCTTCTGCAACCAGTCCCAGATATTGTGCCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR CAA 90 bp ATGTTTGAACTATTTGGCCAGGGAATCCTACCAGTGAGTGATTTCCCTGGGGGCGGATGTTGCGAAGGCTaGCTTCATTTTGCTGGCACC +
Preference number: 5 (lower is better)
Translates to: MFELFGQGILPVSDFPGGGCCEG*LHFAGT
Trigger: GGTGCCAGCAAAATGAAGCAAGCCTTCGCAACATCC...GCCCCCAGGGAAATCACTCACTGGTAGGATTCCCTGGCCAAATAGTTCAAACAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CAA 90 bp CCTGGCATCATGGGAGCAATCCCATTCTCTGGCCTGGAGCATTCTATAATGCTGGCCAGACCTTTCATCTaGATGGAGAATTCTCCCAGC +
Preference number: 5 (lower is better)
Translates to: PGIMGAIPFSGLEHSIMLARPFI*MENSPS
Trigger: GCTGGGAGAATTCTCCATCAAGATGAAAGGTCTGGC...CAGCATTATAGAATGCTCCAGGCCAGAGAATGGGATTGCTCCCATGATGCCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR CAA 90 bp AGCAGCCCTGCTTCCTCTGGAGCTCTGCCTCAAAGGGAACAAGTCCCACCACTTCCATTTACTTCTATTTaGCCTTTCAGTTTCCACCGC +
Preference number: 5 (lower is better)
Translates to: SSPASSGALPQREQVPPLPFTSI*PFSFHR
Trigger: GCGGTGGAAACTGAAAGGCAAAATAGAAGTAAATGG...AAGTGGTGGGACTTGTTCCCTTTGAGGCAGAGCTCCAGAGGAAGCAGGGCTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR CAA 90 bp AACAAGTCCCACCACTTCCCTGACCAGGCCCTGGCATCATGGGAGCAATCCCATCCATTTACTTCTATTTaGCCTTTCAGTTTCCACCGC +
Preference number: 5 (lower is better)
Translates to: NKSHHFPDQALASWEQSHPFTSI*PFSFHR
Trigger: GCGGTGGAAACTGAAAGGCAAAATAGAAGTAAATGG...ATGGGATTGCTCCCATGATGCCAGGGCCTGGTCAGGGAAGTGGTGGGACTTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR CAA 90 bp GAACTATTTGGCCAGGGAATCCTACCAGTGAGTGATTTCCCTGGGGGCAGTAACTTGAGCTCCGTGACCTaGATGGAGATGAACCCAACT +
Preference number: 5 (lower is better)
Translates to: ELFGQGILPVSDFPGGSNLSSVT*MEMNPT
Trigger: AGTTGGGTTCATCTCCATCAAGGTCACGGAGCTCAA...GTTACTGCCCCCAGGGAAATCACTCACTGGTAGGATTCCCTGGCCAAATAGTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CAA 90 bp CATGAGTTGATCACTGAGGAGGTTGAGGGATGGGCACACTGGGATCCATTAGAGTTGAGCTCCGTGACCTaGATGGAGATGAACCCAACT +
Preference number: 5 (lower is better)
Translates to: HELITEEVEGWAHWDPLELSSVT*MEMNPT
Trigger: AGTTGGGTTCATCTCCATCAAGGTCACGGAGCTCAA...CTCTAATGGATCCCAGTGTGCCCATCCCTCAACCTCCTCAGTGATCAACTCATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR CAA 90 bp GTCTTGAACTCTTGGGCTCCAGCAATCCTGGGCTTCCCAAAGTGTTGGGATTACTTGAGCTCCGTGACCTaGATGGAGATGAACCCAACT +
Preference number: 5 (lower is better)
Translates to: VLNSWAPAILGFPKCWDYLSSVT*MEMNPT
Trigger: AGTTGGGTTCATCTCCATCAAGGTCACGGAGCTCAA...GTAATCCCAACACTTTGGGAAGCCCAGGATTGCTGGAGCCCAAGAGTTCAAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000645100.1
ENST00000647136.1
CDS-3UTR CAA 90 bp GTGATTTCCCTGGGGGCAGTAACCACCCCTCAGGATGTCCTTCTTTCTAATCCCGGCAAAGAAAGTGTCTaGCAAGGCACTCAAGACAGA +
Preference number: 5 (lower is better)
Translates to: VISLGAVTTPQDVLLSNPGKESV*QGTQDR
Trigger: TCTGTCTTGAGTGCCTTGCAAGACACTTTCTTTGCC...GGGATTAGAAAGAAGGACATCCTGAGGGGTGGTTACTGCCCCCAGGGAAATCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000259698.9
ENST00000613507.4
CDS-3UTR CAA 90 bp TCCAAATATTCAAGAGGATGCTGGGGTGGGTCGAATGGGACAAATTCTGCAAGTCGGCTGCGGTGCAGCTaGGCAAAGAAAGTGTCTTGC +
Preference number: 5 (lower is better)
Translates to: SKYSRGCWGGSNGTNSASRLRCS*AKKVSC
Trigger: GCAAGACACTTTCTTTGCCAAGCTGCACCGCAGCCG...ACTTGCAGAATTTGTCCCATTCGACCCACCCCAGCATCCTCTTGAATATTTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644411.1
CDS-3UTR CAA 90 bp GAGCATTCTATAATGCTGGCCACATGCAGAAACATTACAAGCAAAACAATGCCAAGGGCGCAGTCCCCGTaGGGCAGGTCACTGAAGCTG +
Preference number: 5 (lower is better)
Translates to: EHSIMLATCRNITSKTMPRAQSP*GRSLKL
Trigger: CAGCTTCAGTGACCTGCCCAACGGGGACTGCGCCCT...TGGCATTGTTTTGCTTGTAATGTTTCTGCATGTGGCCAGCATTATAGAATGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR CAA 90 bp ACAATATCTGGGACTGGTTGCAGAAGAATCCAGAGGGAAGTCAGCAGGTTGAAGCCTTCAGGTGTGACTTaGGCTCTTGGCCTTCTCCCA +
Preference number: 5 (lower is better)
Translates to: TISGTGCRRIQREVSRLKPSGVT*ALGLLP
Trigger: TGGGAGAAGGCCAAGAGCCAAAGTCACACCTGAAGG...CTTCAACCTGCTGACTTCCCTCTGGATTCTTCTGCAACCAGTCCCAGATATTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR CAA 90 bp AAAATGGCACAATATCTGGGACTGGTTGCAGAAGAATCCAGAGGGAAGTCAGCATCCAGTTCCACAGGCTaGAGCTCAGAGGCCTCCTCA +
Preference number: 5 (lower is better)
Translates to: KMAQYLGLVAEESRGKSASSSTG*SSEASS
Trigger: TGAGGAGGCCTCTGAGCTCAAGCCTGTGGAACTGGA...TGCTGACTTCCCTCTGGATTCTTCTGCAACCAGTCCCAGATATTGTGCCATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR CAA 90 bp GCAGCCCTGCTTCCTCTGGAGCTCTGCCTCAAAGGGAACAAGTCCCACCACTTCCAAATTCATGACTTCTaGGTTCAGATCCTGAAACTC +
Preference number: 5 (lower is better)
Translates to: AALLPLELCLKGNKSHHFQIHDF*VQILKL
Trigger: GAGTTTCAGGATCTGAACCAAGAAGTCATGAATTTG...GAAGTGGTGGGACTTGTTCCCTTTGAGGCAGAGCTCCAGAGGAAGCAGGGCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR CAA 90 bp CTCCACTCCTACTCCATTAGGATTTCTCTGACTTCTAGGTTCCTCCACCTCAAAATGTCCAGGCTCTCGTaGCCTGTGGTCAGTGGGAGA +
Preference number: 5 (lower is better)
Translates to: LHSYSIRISLTSRFLHLKMSRLS*PVVSGR
Trigger: TCTCCCACTGACCACAGGCAACGAGAGCCTGGACAT...TTTGAGGTGGAGGAACCTAGAAGTCAGAGAAATCCTAATGGAGTAGGAGTGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CAA 90 bp ATGTTTGAACTATTTGGCCAGGGAATCCTACCAGTGAGTGATTTCCCTGGGGGCAATTTGCTGCACGAGTaGGGTGCAGTACTGGAGGTG +
Preference number: 5 (lower is better)
Translates to: MFELFGQGILPVSDFPGGNLLHE*GAVLEV
Trigger: CACCTCCAGTACTGCACCCAACTCGTGCAGCAAATT...GCCCCCAGGGAAATCACTCACTGGTAGGATTCCCTGGCCAAATAGTTCAAACAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CAA 90 bp GATATGTACACGATAAGTTCACAGTTGAAAGAACCATTTGCCAGAAGCCTGGCATGCTGGGCCAGGAGGTaGCTGGGAGCAAGGTCACTC +
Preference number: 5 (lower is better)
Translates to: DMYTISSQLKEPFARSLACWARR*LGARSL
Trigger: GAGTGACCTTGCTCCCAGCAACCTCCTGGCCCAGCA...TGCCAGGCTTCTGGCAAATGGTTCTTTCAACTGTGAACTTATCGTGTACATATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CAA 90 bp GGCCATGAGTTGATCACTGAGGAGGTTGAGGGATGGGCACACTGGGATCCATTAAAGATTGGCCATGAGTaGATCACTGAGGAGGTTGAG +
Preference number: 5 (lower is better)
Translates to: GHELITEEVEGWAHWDPLKIGHE*ITEEVE
Trigger: CTCAACCTCCTCAGTGATCAACTCATGGCCAATCTT...TAATGGATCCCAGTGTGCCCATCCCTCAACCTCCTCAGTGATCAACTCATGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR CAA 90 bp AGAATGAATGCCTTGGGCATGACAAGAAGCAGCCCTGCTTCCTCTGGAGCTCTGAAGATTGGCCATGAGTaGATCACTGAGGAGGTTGAG +
Preference number: 5 (lower is better)
Translates to: RMNALGMTRSSPASSGALKIGHE*ITEEVE
Trigger: CTCAACCTCCTCAGTGATCAACTCATGGCCAATCTT...CAGAGCTCCAGAGGAAGCAGGGCTGCTTCTTGTCATGCCCAAGGCATTCATTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510784.8
ENST00000540914.5
CDS TCA 90 bp TGGGCTGTGGTAGACACCAACAGGGCTGCAGCACTTGGTCCAGAATaGCAGCAAAGACAGCTTTTTGTGAAATTCTGGTATGGCTTCCAC +
Preference number: 5 (lower is better)
Translates to: WAVVDTNRAAALGPE*QQRQLFVKFWYGFH
Trigger: GTGGAAGCCATACCAGAATTTCACAAAAAGCTGTCTTTGCTGTCATTCTGGACCAAGTGCTGCAGCCCTGTTGGTGTCTACCACAGCCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000259698.9
ENST00000463828.1
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CAA 90 bp GGGGTGGGTCGAATGGGACAAATTCTGCAAGTTAGAAGCACTAAATGTCCTCCAAAGGCTTGCTTCATTTaGCTGGCACCATCCTGGAGG +
Preference number: 5 (lower is better)
Translates to: GVGRMGQILQVRSTKCPPKACFI*LAPSWR
Trigger: CCTCCAGGATGGTGCCAGCAAAATGAAGCAAGCCTT...TGGAGGACATTTAGTGCTTCTAACTTGCAGAATTTGTCCCATTCGACCCACCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR CAA 90 bp ACAATATCTGGGACTGGTTGCAGAAGAATCCAGAGGGAAGTCAGCAGGTTGAAGGGATGTTGCGAAGGCTaGCTTCATTTTGCTGGCACC +
Preference number: 5 (lower is better)
Translates to: TISGTGCRRIQREVSRLKGCCEG*LHFAGT
Trigger: GGTGCCAGCAAAATGAAGCAAGCCTTCGCAACATCC...CTTCAACCTGCTGACTTCCCTCTGGATTCTTCTGCAACCAGTCCCAGATATTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR CAA 90 bp AAATGGCACAATATCTGGGACTGGTTGCAGAAGAATCCAGAGGGAAGTCAGCAGGGATGTTGCGAAGGCTaGCTTCATTTTGCTGGCACC +
Preference number: 5 (lower is better)
Translates to: KWHNIWDWLQKNPEGSQQGCCEG*LHFAGT
Trigger: GGTGCCAGCAAAATGAAGCAAGCCTTCGCAACATCC...CTGCTGACTTCCCTCTGGATTCTTCTGCAACCAGTCCCAGATATTGTGCCATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR CAA 90 bp GGGACTGGTTGCAGAAGAATCCAGAGGGAAGTCAGCAGGTTGAAGAATAGGAAATGCTGGCAGGGGATGTaGCGAAGGCTTGCTTCATTT +
Preference number: 5 (lower is better)
Translates to: GTGCRRIQREVSRLKNRKCWQGM*RRLASF
Trigger: AAATGAAGCAAGCCTTCGCAACATCCCCTGCCAGCA...TTTCCTATTCTTCAACCTGCTGACTTCCCTCTGGATTCTTCTGCAACCAGTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR CAA 90 bp GTGATTTCCCTGGGGGCAGTAACCACCCCTCAGGATGTCCTTCTTTCTAATCCCTTCTCTGTGTACTCCTaGAAGCTCCGATTGATCTCT +
Preference number: 5 (lower is better)
Translates to: VISLGAVTTPQDVLLSNPFSVYS*KLRLIS
Trigger: AGAGATCAATCGGAGCTTCAAGGAGTACACAGAGAA...GGGATTAGAAAGAAGGACATCCTGAGGGGTGGTTACTGCCCCCAGGGAAATCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CAA 90 bp AGAATGAATGCCTTGGGCATGACAAGAAGCAGCCCTGCTTCCTCTGGAGCTCTGTTCTCTGTGTACTCCTaGAAGCTCCGATTGATCTCT +
Preference number: 5 (lower is better)
Translates to: RMNALGMTRSSPASSGALFSVYS*KLRLIS
Trigger: AGAGATCAATCGGAGCTTCAAGGAGTACACAGAGAA...CAGAGCTCCAGAGGAAGCAGGGCTGCTTCTTGTCATGCCCAAGGCATTCATTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000645100.1
ENST00000647136.1
CDS-3UTR CAA 90 bp AATGGCACAATATCTGGGACTGGTTGCAGAAGAATCCAGAGGGAAGTCAGCAGGGCCAGACCTTTCATCTaGATGGAGAATTCTCCCAGC +
Preference number: 5 (lower is better)
Translates to: NGTISGTGCRRIQREVSRARPFI*MENSPS
Trigger: GCTGGGAGAATTCTCCATCAAGATGAAAGGTCTGGC...CCTGCTGACTTCCCTCTGGATTCTTCTGCAACCAGTCCCAGATATTGTGCCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR CAA 90 bp ATCATGGGAGCAATCCCATTCTCTGGCCTGGAGCATTCTATAATGCTGGCCACAGCCAGACCTTTCATCTaGATGGAGAATTCTCCCAGC +
Preference number: 5 (lower is better)
Translates to: IMGAIPFSGLEHSIMLATARPFI*MENSPS
Trigger: GCTGGGAGAATTCTCCATCAAGATGAAAGGTCTGGC...TGTGGCCAGCATTATAGAATGCTCCAGGCCAGAGAATGGGATTGCTCCCATGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR CAA 90 bp GTGATTTCCCTGGGGGCAGTAACCACCCCTCAGGATGTCCTTCTTTCTAATCCCCCATCCCAGCTCTGCTaGCCATTTACTTCTATTTTG +
Preference number: 5 (lower is better)
Translates to: VISLGAVTTPQDVLLSNPPSQLC*PFTSIL
Trigger: CAAAATAGAAGTAAATGGCAAGCAGAGCTGGGATGG...GGGATTAGAAAGAAGGACATCCTGAGGGGTGGTTACTGCCCCCAGGGAAATCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CAA 90 bp GGGGTGGGTCGAATGGGACAAATTCTGCAAGTTAGAAGCACTAAATGTCCTCCAGCTGCAAACAGCTCTTaGGTCTCACAGGTCACGCTA +
Preference number: 5 (lower is better)
Translates to: GVGRMGQILQVRSTKCPPAANSS*VSQVTL
Trigger: TAGCGTGACCTGTGAGACCAAAGAGCTGTTTGCAGC...TGGAGGACATTTAGTGCTTCTAACTTGCAGAATTTGTCCCATTCGACCCACCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR CAA 90 bp AAAATGGCACAATATCTGGGACTGGTTGCAGAAGAATCCAGAGGGAAGTCAGCAAAGAAGGAGTGGTCTTaGAAGGTGGGCGTTTCCGGG +
Preference number: 5 (lower is better)
Translates to: KMAQYLGLVAEESRGKSAKKEWS*KVGVSG
Trigger: CCCGGAAACGCCCACCTTCAAAGACCACTCCTTCTT...TGCTGACTTCCCTCTGGATTCTTCTGCAACCAGTCCCAGATATTGTGCCATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR CAA 90 bp AAAATGGCACAATATCTGGGACTGGTTGCAGAAGAATCCAGAGGGAAGTCAGCACCTTCAGGTGTGACTTaGGCTCTTGGCCTTCTCCCA +
Preference number: 5 (lower is better)
Translates to: KMAQYLGLVAEESRGKSAPSGVT*ALGLLP
Trigger: TGGGAGAAGGCCAAGAGCCAAAGTCACACCTGAAGG...TGCTGACTTCCCTCTGGATTCTTCTGCAACCAGTCCCAGATATTGTGCCATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR CAA 90 bp TCCAAATATTCAAGAGGATGCTGGGGTGGGTCGAATGGGACAAATTCTGCAAGTCCTTCAGGTGTGACTTaGGCTCTTGGCCTTCTCCCA +
Preference number: 5 (lower is better)
Translates to: SKYSRGCWGGSNGTNSASPSGVT*ALGLLP
Trigger: TGGGAGAAGGCCAAGAGCCAAAGTCACACCTGAAGG...ACTTGCAGAATTTGTCCCATTCGACCCACCCCAGCATCCTCTTGAATATTTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR CAA 90 bp ATAAAATGGCACAATATCTGGGACTGGTTGCAGAAGAATCCAGAGGGAAGTCAGTCCAGTTCCACAGGCTaGAGCTCAGAGGCCTCCTCA +
Preference number: 5 (lower is better)
Translates to: IKWHNIWDWLQKNPEGSQSSSTG*SSEASS
Trigger: TGAGGAGGCCTCTGAGCTCAAGCCTGTGGAACTGGA...CTGACTTCCCTCTGGATTCTTCTGCAACCAGTCCCAGATATTGTGCCATTTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR CAA 90 bp CAAGAAGCAGCCCTGCTTCCTCTGGAGCTCTGCCTCAAAGGGAACAAGTCCCACCAAATTCATGACTTCTaGGTTCAGATCCTGAAACTC +
Preference number: 5 (lower is better)
Translates to: QEAALLPLELCLKGNKSHQIHDF*VQILKL
Trigger: GAGTTTCAGGATCTGAACCAAGAAGTCATGAATTTG...GTGGGACTTGTTCCCTTTGAGGCAGAGCTCCAGAGGAAGCAGGGCTGCTTCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR CAA 90 bp GTGATTTCCCTGGGGGCAGTAACCACCCCTCAGGATGTCCTTCTTTCTAATCCCTCTCTAAGAGACTTCTaGCCACAAATGGGGTTTTGC +
Preference number: 5 (lower is better)
Translates to: VISLGAVTTPQDVLLSNPSLRDF*PQMGFC
Trigger: GCAAAACCCCATTTGTGGCAAGAAGTCTCTTAGAGA...GGGATTAGAAAGAAGGACATCCTGAGGGGTGGTTACTGCCCCCAGGGAAATCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CAA 90 bp GTGATTTCCCTGGGGGCAGTAACCACCCCTCAGGATGTCCTTCTTTCTAATCCCGAGTTTCTCCATCACTaGGATCTGCCTAGAAAGCTT +
Preference number: 5 (lower is better)
Translates to: VISLGAVTTPQDVLLSNPEFLHH*DLPRKL
Trigger: AAGCTTTCTAGGCAGATCCAAGTGATGGAGAAACTC...GGGATTAGAAAGAAGGACATCCTGAGGGGTGGTTACTGCCCCCAGGGAAATCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CAA 90 bp CTCCACTCCTACTCCATTAGGATTTCTCTGACTTCTAGGTTCCTCCACCTCAAATTGCCCAGGTTGGTCTaGAACCTCCTGGGCTTAAGC +
Preference number: 5 (lower is better)
Translates to: LHSYSIRISLTSRFLHLKLPRLV*NLLGLS
Trigger: GCTTAAGCCCAGGAGGTTCAAGACCAACCTGGGCAA...TTTGAGGTGGAGGAACCTAGAAGTCAGAGAAATCCTAATGGAGTAGGAGTGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CAA 90 bp ATCATGGGAGCAATCCCATTCTCTGGCCTGGAGCATTCTATAATGCTGGCCACAGCAAAACAATGCCAGTaGCTATGGGCACAGAGTTGG +
Preference number: 5 (lower is better)
Translates to: IMGAIPFSGLEHSIMLATAKQCQ*LWAQSW
Trigger: CCAACTCTGTGCCCATAGCAACTGGCATTGTTTTGC...TGTGGCCAGCATTATAGAATGCTCCAGGCCAGAGAATGGGATTGCTCCCATGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR CAA 90 bp AGGGCCTTGCAGGGATCTGTCTCTGACACTCAAGATGGCACAAAAGCACATGGGGTCAACCACAAAGCCTaGGGAAACAGAACTGCTATA +
Preference number: 5 (lower is better)
Translates to: RALQGSVSDTQDGTKAHGVNHKA*GNRTAI
Trigger: TATAGCAGTTCTGTTTCCCAAGGCTTTGTGGTTGAC...CCCATGTGCTTTTGTGCCATCTTGAGTGTCAGAGACAGATCCCTGCAAGGCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000510784.8
ENST00000540914.5
CDS-3UTR CAA 90 bp GGGACTGGTTGCAGAAGAATCCAGAGGGAAGTCAGCAGGTTGAAGAATAGGAAAATCCTTCAGTTCTGCTaGCAAAAAGTGCGCGTGCCC +
Preference number: 5 (lower is better)
Translates to: GTGCRRIQREVSRLKNRKILQFC*QKVRVP
Trigger: GGGCACGCGCACTTTTTGCAAGCAGAACTGAAGGAT...TTTCCTATTCTTCAACCTGCTGACTTCCCTCTGGATTCTTCTGCAACCAGTCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000643623.1
CDS CCA 90 bp GTACTTCCTGCTGGGCCAGGAGGTTGCTGGGAGCAAGGTCACTCATaGTTTGTAGCAGTTTTTCATCTCTTAGTGATTGCAGAGTCTGAA +
Preference number: 5 (lower is better)
Translates to: VLPAGPGGCWEQGHS*FVAVFHLLVIAESE
Trigger: TTCAGACTCTGCAATCACTAAGAGATGAAAAACTGCTACAAACCATGAGTGACCTTGCTCCCAGCAACCTCCTGGCCCAGCAGGAAGTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CAA 90 bp ATATACAGATATGTACACGATAAGTTCACAGTTGAAAGAACCATTTGCCAGAAGCCTGAGCTGGCTCACTaGGGTGAAGGGGACCCCGGG +
Preference number: 5 (lower is better)
Translates to: IYRYVHDKFTVERTICQKPELAH*GEGDPG
Trigger: CCCGGGGTCCCCTTCACCCAAGTGAGCCAGCTCAGG...CTTCTGGCAAATGGTTCTTTCAACTGTGAACTTATCGTGTACATATCTGTATAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259698.9
CDS-3UTR CAA 90 bp ACAATATCTGGGACTGGTTGCAGAAGAATCCAGAGGGAAGTCAGCAGGTTGAAGCTTCTAATGATCCCATaGGGCCCTCCAGGCGAAAAA +
Preference number: 5 (lower is better)
Translates to: TISGTGCRRIQREVSRLKLLMIP*GPPGEK
Trigger: TTTTTCGCCTGGAGGGCCCAATGGGATCATTAGAAG...CTTCAACCTGCTGACTTCCCTCTGGATTCTTCTGCAACCAGTCCCAGATATTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR CAA 90 bp CTCCACTCCTACTCCATTAGGATTTCTCTGACTTCTAGGTTCCTCCACCTCAAAGGATGTTGCGAAGGCTaGCTTCATTTTGCTGGCACC +
Preference number: 5 (lower is better)
Translates to: LHSYSIRISLTSRFLHLKGCCEG*LHFAGT
Trigger: GGTGCCAGCAAAATGAAGCAAGCCTTCGCAACATCC...TTTGAGGTGGAGGAACCTAGAAGTCAGAGAAATCCTAATGGAGTAGGAGTGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CAA 90 bp AAAATGGCACAATATCTGGGACTGGTTGCAGAAGAATCCAGAGGGAAGTCAGCAGGATGTTGCGAAGGCTaGCTTCATTTTGCTGGCACC +
Preference number: 5 (lower is better)
Translates to: KMAQYLGLVAEESRGKSAGCCEG*LHFAGT
Trigger: GGTGCCAGCAAAATGAAGCAAGCCTTCGCAACATCC...TGCTGACTTCCCTCTGGATTCTTCTGCAACCAGTCCCAGATATTGTGCCATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR CAA 90 bp AAAATGGCACAATATCTGGGACTGGTTGCAGAAGAATCCAGAGGGAAGTCAGCATGCTGGCAGGGGATGTaGCGAAGGCTTGCTTCATTT +
Preference number: 5 (lower is better)
Translates to: KMAQYLGLVAEESRGKSACWQGM*RRLASF
Trigger: AAATGAAGCAAGCCTTCGCAACATCCCCTGCCAGCA...TGCTGACTTCCCTCTGGATTCTTCTGCAACCAGTCCCAGATATTGTGCCATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR CAA 90 bp CTCCACTCCTACTCCATTAGGATTTCTCTGACTTCTAGGTTCCTCCACCTCAAATGCTGGCAGGGGATGTaGCGAAGGCTTGCTTCATTT +
Preference number: 5 (lower is better)
Translates to: LHSYSIRISLTSRFLHLKCWQGM*RRLASF
Trigger: AAATGAAGCAAGCCTTCGCAACATCCCCTGCCAGCA...TTTGAGGTGGAGGAACCTAGAAGTCAGAGAAATCCTAATGGAGTAGGAGTGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CAA 90 bp TCCAAATATTCAAGAGGATGCTGGGGTGGGTCGAATGGGACAAATTCTGCAAGTTGCTGGCAGGGGATGTaGCGAAGGCTTGCTTCATTT +
Preference number: 5 (lower is better)
Translates to: SKYSRGCWGGSNGTNSASCWQGM*RRLASF
Trigger: AAATGAAGCAAGCCTTCGCAACATCCCCTGCCAGCA...ACTTGCAGAATTTGTCCCATTCGACCCACCCCAGCATCCTCTTGAATATTTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR CAA 90 bp GGGACTGGTTGCAGAAGAATCCAGAGGGAAGTCAGCAGGTTGAAGAATAGGAAATCCTTGAAGCTCCGATaGATCTCTGTCAGACTCTCC +
Preference number: 5 (lower is better)
Translates to: GTGCRRIQREVSRLKNRKSLKLR*ISVRLS
Trigger: GGAGAGTCTGACAGAGATCAATCGGAGCTTCAAGGA...TTTCCTATTCTTCAACCTGCTGACTTCCCTCTGGATTCTTCTGCAACCAGTCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR CAA 90 bp CATGAGTTGATCACTGAGGAGGTTGAGGGATGGGCACACTGGGATCCATTAGAGTTCTCTGTGTACTCCTaGAAGCTCCGATTGATCTCT +
Preference number: 5 (lower is better)
Translates to: HELITEEVEGWAHWDPLEFSVYS*KLRLIS
Trigger: AGAGATCAATCGGAGCTTCAAGGAGTACACAGAGAA...CTCTAATGGATCCCAGTGTGCCCATCCCTCAACCTCCTCAGTGATCAACTCATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR CAA 90 bp ACAATATCTGGGACTGGTTGCAGAAGAATCCAGAGGGAAGTCAGCAGGTTGAAGGCCAGACCTTTCATCTaGATGGAGAATTCTCCCAGC +
Preference number: 5 (lower is better)
Translates to: TISGTGCRRIQREVSRLKARPFI*MENSPS
Trigger: GCTGGGAGAATTCTCCATCAAGATGAAAGGTCTGGC...CTTCAACCTGCTGACTTCCCTCTGGATTCTTCTGCAACCAGTCCCAGATATTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR CAA 90 bp CATGAGTTGATCACTGAGGAGGTTGAGGGATGGGCACACTGGGATCCATTAGAGCCATCCCAGCTCTGCTaGCCATTTACTTCTATTTTG +
Preference number: 5 (lower is better)
Translates to: HELITEEVEGWAHWDPLEPSQLC*PFTSIL
Trigger: CAAAATAGAAGTAAATGGCAAGCAGAGCTGGGATGG...CTCTAATGGATCCCAGTGTGCCCATCCCTCAACCTCCTCAGTGATCAACTCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR CAA 90 bp CCTGGCATCATGGGAGCAATCCCATTCTCTGGCCTGGAGCATTCTATAATGCTGCCATCCCAGCTCTGCTaGCCATTTACTTCTATTTTG +
Preference number: 5 (lower is better)
Translates to: PGIMGAIPFSGLEHSIMLPSQLC*PFTSIL
Trigger: CAAAATAGAAGTAAATGGCAAGCAGAGCTGGGATGG...CAGCATTATAGAATGCTCCAGGCCAGAGAATGGGATTGCTCCCATGATGCCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR CAA 90 bp CTCCACTCCTACTCCATTAGGATTTCTCTGACTTCTAGGTTCCTCCACCTCAAAGCTGCAAACAGCTCTTaGGTCTCACAGGTCACGCTA +
Preference number: 5 (lower is better)
Translates to: LHSYSIRISLTSRFLHLKAANSS*VSQVTL
Trigger: TAGCGTGACCTGTGAGACCAAAGAGCTGTTTGCAGC...TTTGAGGTGGAGGAACCTAGAAGTCAGAGAAATCCTAATGGAGTAGGAGTGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CAA 90 bp ATAAAATGGCACAATATCTGGGACTGGTTGCAGAAGAATCCAGAGGGAAGTCAGAAGAAGGAGTGGTCTTaGAAGGTGGGCGTTTCCGGG +
Preference number: 5 (lower is better)
Translates to: IKWHNIWDWLQKNPEGSQKKEWS*KVGVSG
Trigger: CCCGGAAACGCCCACCTTCAAAGACCACTCCTTCTT...CTGACTTCCCTCTGGATTCTTCTGCAACCAGTCCCAGATATTGTGCCATTTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR CAA 90 bp GATAAAATGGCACAATATCTGGGACTGGTTGCAGAAGAATCCAGAGGGAAGTCAAAGAAGGAGTGGTCTTaGAAGGTGGGCGTTTCCGGG +
Preference number: 5 (lower is better)
Translates to: DKMAQYLGLVAEESRGKSKKEWS*KVGVSG
Trigger: CCCGGAAACGCCCACCTTCAAAGACCACTCCTTCTT...TGACTTCCCTCTGGATTCTTCTGCAACCAGTCCCAGATATTGTGCCATTTTATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR CAA 90 bp ATGTTTGAACTATTTGGCCAGGGAATCCTACCAGTGAGTGATTTCCCTGGGGGCGGCAAAGAAAGTGTCTaGCAAGGCACTCAAGACAGA +
Preference number: 5 (lower is better)
Translates to: MFELFGQGILPVSDFPGGGKESV*QGTQDR
Trigger: TCTGTCTTGAGTGCCTTGCAAGACACTTTCTTTGCC...GCCCCCAGGGAAATCACTCACTGGTAGGATTCCCTGGCCAAATAGTTCAAACAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000259698.9
ENST00000613507.4
CDS-3UTR CAA 90 bp ATAAAATGGCACAATATCTGGGACTGGTTGCAGAAGAATCCAGAGGGAAGTCAGCCTTCAGGTGTGACTTaGGCTCTTGGCCTTCTCCCA +
Preference number: 5 (lower is better)
Translates to: IKWHNIWDWLQKNPEGSQPSGVT*ALGLLP
Trigger: TGGGAGAAGGCCAAGAGCCAAAGTCACACCTGAAGG...CTGACTTCCCTCTGGATTCTTCTGCAACCAGTCCCAGATATTGTGCCATTTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR CAA 90 bp GATATGTACACGATAAGTTCACAGTTGAAAGAACCATTTGCCAGAAGCCTGGCATCCAGTTCCACAGGCTaGAGCTCAGAGGCCTCCTCA +
Preference number: 5 (lower is better)
Translates to: DMYTISSQLKEPFARSLASSSTG*SSEASS
Trigger: TGAGGAGGCCTCTGAGCTCAAGCCTGTGGAACTGGA...TGCCAGGCTTCTGGCAAATGGTTCTTTCAACTGTGAACTTATCGTGTACATATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CAA 90 bp GATATGTACACGATAAGTTCACAGTTGAAAGAACCATTTGCCAGAAGCCTGGCAATGTCCAGGCTCTCGTaGCCTGTGGTCAGTGGGAGA +
Preference number: 5 (lower is better)
Translates to: DMYTISSQLKEPFARSLAMSRLS*PVVSGR
Trigger: TCTCCCACTGACCACAGGCAACGAGAGCCTGGACAT...TGCCAGGCTTCTGGCAAATGGTTCTTTCAACTGTGAACTTATCGTGTACATATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CAA 90 bp ATGTTTGAACTATTTGGCCAGGGAATCCTACCAGTGAGTGATTTCCCTGGGGGCGCCTCACTAACTTCGTaGTCCTCTCTGGTTAATAGC +
Preference number: 5 (lower is better)
Translates to: MFELFGQGILPVSDFPGGASLTS*SSLVNS
Trigger: GCTATTAACCAGAGAGGACAACGAAGTTAGTGAGGC...GCCCCCAGGGAAATCACTCACTGGTAGGATTCCCTGGCCAAATAGTTCAAACAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CAA 90 bp ATGTTTGAACTATTTGGCCAGGGAATCCTACCAGTGAGTGATTTCCCTGGGGGCAGGAAATTTGTCCAATaGTTCATATGCCAGCCGCCC +
Preference number: 5 (lower is better)
Translates to: MFELFGQGILPVSDFPGGRKFVQ*FICQPP
Trigger: GGGCGGCTGGCATATGAACAATTGGACAAATTTCCT...GCCCCCAGGGAAATCACTCACTGGTAGGATTCCCTGGCCAAATAGTTCAAACAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CAA 90 bp GTGATTTCCCTGGGGGCAGTAACCACCCCTCAGGATGTCCTTCTTTCTAATCCCCAGTCTCGAGGAAATTaGTCCAATTGTTCATATGCC +
Preference number: 5 (lower is better)
Translates to: VISLGAVTTPQDVLLSNPQSRGN*SNCSYA
Trigger: GGCATATGAACAATTGGACAAATTTCCTCGAGACTG...GGGATTAGAAAGAAGGACATCCTGAGGGGTGGTTACTGCCCCCAGGGAAATCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CAA 90 bp GATATGTACACGATAAGTTCACAGTTGAAAGAACCATTTGCCAGAAGCCTGGCAGCTATGTTGCCCAGGTaGGTCTTGAACCTCCTGGGC +
Preference number: 5 (lower is better)
Translates to: DMYTISSQLKEPFARSLAAMLPR*VLNLLG
Trigger: GCCCAGGAGGTTCAAGACCAACCTGGGCAACATAGC...TGCCAGGCTTCTGGCAAATGGTTCTTTCAACTGTGAACTTATCGTGTACATATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CAA 90 bp GTGATTTCCCTGGGGGCAGTAACCACCCCTCAGGATGTCCTTCTTTCTAATCCCTATTGTTTTGATACCTaGGCATACCCCACCTTGTAC +
Preference number: 5 (lower is better)
Translates to: VISLGAVTTPQDVLLSNPYCFDT*AYPTLY
Trigger: GTACAAGGTGGGGTATGCCAAGGTATCAAAACAATA...GGGATTAGAAAGAAGGACATCCTGAGGGGTGGTTACTGCCCCCAGGGAAATCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CAA 90 bp GGCCATGAGTTGATCACTGAGGAGGTTGAGGGATGGGCACACTGGGATCCATTAAACAAATCGGTATGTTaGCAGAGTGTCGACAATTGC +
Preference number: 5 (lower is better)
Translates to: GHELITEEVEGWAHWDPLNKSVC*QSVDNC
Trigger: GCAATTGTCGACACTCTGCAAACATACCGATTTGTT...TAATGGATCCCAGTGTGCCCATCCCTCAACCTCCTCAGTGATCAACTCATGGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378023.8
ENST00000540914.5
CDS-3UTR CAA 90 bp GGCATCATGGGAGCAATCCCATTCTCTGGCCTGGAGCATTCTATAATGCTGGCCAACAAATCGGTATGTTaGCAGAGTGTCGACAATTGC +
Preference number: 5 (lower is better)
Translates to: GIMGAIPFSGLEHSIMLANKSVC*QSVDNC
Trigger: GCAATTGTCGACACTCTGCAAACATACCGATTTGTT...GGCCAGCATTATAGAATGCTCCAGGCCAGAGAATGGGATTGCTCCCATGATGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540914.5
CDS-3UTR CAA 90 bp GGCCATGAGTTGATCACTGAGGAGGTTGAGGGATGGGCACACTGGGATCCATTAAGGGAAGTCAGCAGGTaGAAGAATAGGAAACAAGAT +
Preference number: 5 (lower is better)
Translates to: GHELITEEVEGWAHWDPLREVSR*KNRKQD
Trigger: ATCTTGTTTCCTATTCTTCAACCTGCTGACTTCCCT...TAATGGATCCCAGTGTGCCCATCCCTCAACCTCCTCAGTGATCAACTCATGGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR CAA 90 bp ATAAAATGGCACAATATCTGGGACTGGTTGCAGAAGAATCCAGAGGGAAGTCAGAAGGTAGGAAGGGCCTaGCAGGGATCTGTCTCTGAC +
Preference number: 5 (lower is better)
Translates to: IKWHNIWDWLQKNPEGSQKVGRA*QGSVSD
Trigger: GTCAGAGACAGATCCCTGCAAGGCCCTTCCTACCTT...CTGACTTCCCTCTGGATTCTTCTGCAACCAGTCCCAGATATTGTGCCATTTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510784.8
ENST00000540914.5
CDS GCA 90 bp ATAGAGCAAGGCCTTTTCCCTGAAATGCTGATTTTTGGAGGCTGCTaGCAAGTAAAGCGTCACAGCCTCACTAACTTCGTTGTCCTCTCT +
Preference number: 5 (lower is better)
Translates to: IEQGLFPEMLIFGGC*QVKRHSLTNFVVLS
Trigger: AGAGAGGACAACGAAGTTAGTGAGGCTGTGACGCTTTACTTGGCAGCAGCCTCCAAAAATCAGCATTTCAGGGAAAAGGCCTTGCTCTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS GCA 90 bp GTAATAGAGCAAGGCCTTTTCCCTGAAATGCTGATTTTTGGAGGCTaGTGCCAAGTAAAGCGTCACAGCCTCACTAACTTCGTTGTCCTC +
Preference number: 5 (lower is better)
Translates to: VIEQGLFPEMLIFGG*CQVKRHSLTNFVVL
Trigger: GAGGACAACGAAGTTAGTGAGGCTGTGACGCTTTACTTGGCAGCAGCCTCCAAAAATCAGCATTTCAGGGAAAAGGCCTTGCTCTATTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS CCA 90 bp TGCAGCCTGGTGAAACGGTGTTTACGACAGTCTACACGGCACTACTaGGTATGCTGTCTCCTTGGATTGTGTCATATTTTTAACCCAGTG +
Preference number: 5 (lower is better)
Translates to: CSLVKRCLRQSTRHY*VCCLLGLCHIFNPV
Trigger: CACTGGGTTAAAAATATGACACAATCCAAGGAGACAGCATACCCAGTAGTGCCGTGTAGACTGTCGTAAACACCGTTTCACCAGGCTGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000606385.1
CDS-3UTR CAA 90 bp TGCAGAAGAATCCAGAGGGAAGTCAGCAGGTTGAAGAATAGGAAACAAGATTGGAAGGCTTGCTTCATTTaGCTGGCACCATCCTGGAGG +
Preference number: 5 (lower is better)
Translates to: CRRIQREVSRLKNRKQDWKACFI*LAPSWR
Trigger: CCTCCAGGATGGTGCCAGCAAAATGAAGCAAGCCTT...CCAATCTTGTTTCCTATTCTTCAACCTGCTGACTTCCCTCTGGATTCTTCTGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR CAA 90 bp ATATTCAAGAGGATGCTGGGGTGGGTCGAATGGGACAAATTCTGCAAGTTAGAAGGATGTTGCGAAGGCTaGCTTCATTTTGCTGGCACC +
Preference number: 5 (lower is better)
Translates to: IFKRMLGWVEWDKFCKLEGCCEG*LHFAGT
Trigger: GGTGCCAGCAAAATGAAGCAAGCCTTCGCAACATCC...TTCTAACTTGCAGAATTTGTCCCATTCGACCCACCCCAGCATCCTCTTGAATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR CAA 90 bp GATAAAATGGCACAATATCTGGGACTGGTTGCAGAAGAATCCAGAGGGAAGTCATGCTGGCAGGGGATGTaGCGAAGGCTTGCTTCATTT +
Preference number: 5 (lower is better)
Translates to: DKMAQYLGLVAEESRGKSCWQGM*RRLASF
Trigger: AAATGAAGCAAGCCTTCGCAACATCCCCTGCCAGCA...TGACTTCCCTCTGGATTCTTCTGCAACCAGTCCCAGATATTGTGCCATTTTATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR CAA 90 bp ATATTCAAGAGGATGCTGGGGTGGGTCGAATGGGACAAATTCTGCAAGTTAGAATGCTGGCAGGGGATGTaGCGAAGGCTTGCTTCATTT +
Preference number: 5 (lower is better)
Translates to: IFKRMLGWVEWDKFCKLECWQGM*RRLASF
Trigger: AAATGAAGCAAGCCTTCGCAACATCCCCTGCCAGCA...TTCTAACTTGCAGAATTTGTCCCATTCGACCCACCCCAGCATCCTCTTGAATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR CAA 90 bp TGCAGAAGAATCCAGAGGGAAGTCAGCAGGTTGAAGAATAGGAAACAAGATTGGTGCTGGCAGGGGATGTaGCGAAGGCTTGCTTCATTT +
Preference number: 5 (lower is better)
Translates to: CRRIQREVSRLKNRKQDWCWQGM*RRLASF
Trigger: AAATGAAGCAAGCCTTCGCAACATCCCCTGCCAGCA...CCAATCTTGTTTCCTATTCTTCAACCTGCTGACTTCCCTCTGGATTCTTCTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR CAA 90 bp AAAATGGCACAATATCTGGGACTGGTTGCAGAAGAATCCAGAGGGAAGTCAGCATCCTTGAAGCTCCGATaGATCTCTGTCAGACTCTCC +
Preference number: 5 (lower is better)
Translates to: KMAQYLGLVAEESRGKSASLKLR*ISVRLS
Trigger: GGAGAGTCTGACAGAGATCAATCGGAGCTTCAAGGA...TGCTGACTTCCCTCTGGATTCTTCTGCAACCAGTCCCAGATATTGTGCCATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR CAA 90 bp AAAATGGCACAATATCTGGGACTGGTTGCAGAAGAATCCAGAGGGAAGTCAGCAGCCAGACCTTTCATCTaGATGGAGAATTCTCCCAGC +
Preference number: 5 (lower is better)
Translates to: KMAQYLGLVAEESRGKSAARPFI*MENSPS
Trigger: GCTGGGAGAATTCTCCATCAAGATGAAAGGTCTGGC...TGCTGACTTCCCTCTGGATTCTTCTGCAACCAGTCCCAGATATTGTGCCATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR CAA 90 bp ATGGGAGCAATCCCATTCTCTGGCCTGGAGCATTCTATAATGCTGGCCACATGCCCATTTACTTCTATTTaGCCTTTCAGTTTCCACCGC +
Preference number: 5 (lower is better)
Translates to: MGAIPFSGLEHSIMLATCPFTSI*PFSFHR
Trigger: GCGGTGGAAACTGAAAGGCAAAATAGAAGTAAATGG...GCATGTGGCCAGCATTATAGAATGCTCCAGGCCAGAGAATGGGATTGCTCCCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR CAA 90 bp GAACTATTTGGCCAGGGAATCCTACCAGTGAGTGATTTCCCTGGGGGCAGTAACCCATTTACTTCTATTTaGCCTTTCAGTTTCCACCGC +
Preference number: 5 (lower is better)
Translates to: ELFGQGILPVSDFPGGSNPFTSI*PFSFHR
Trigger: GCGGTGGAAACTGAAAGGCAAAATAGAAGTAAATGG...GTTACTGCCCCCAGGGAAATCACTCACTGGTAGGATTCCCTGGCCAAATAGTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CAA 90 bp TGCAGAAGAATCCAGAGGGAAGTCAGCAGGTTGAAGAATAGGAAACAAGATTGGGCTGCAAACAGCTCTTaGGTCTCACAGGTCACGCTA +
Preference number: 5 (lower is better)
Translates to: CRRIQREVSRLKNRKQDWAANSS*VSQVTL
Trigger: TAGCGTGACCTGTGAGACCAAAGAGCTGTTTGCAGC...CCAATCTTGTTTCCTATTCTTCAACCTGCTGACTTCCCTCTGGATTCTTCTGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR CAA 90 bp GATAAAATGGCACAATATCTGGGACTGGTTGCAGAAGAATCCAGAGGGAAGTCAGCTGCAAACAGCTCTTaGGTCTCACAGGTCACGCTA +
Preference number: 5 (lower is better)
Translates to: DKMAQYLGLVAEESRGKSAANSS*VSQVTL
Trigger: TAGCGTGACCTGTGAGACCAAAGAGCTGTTTGCAGC...TGACTTCCCTCTGGATTCTTCTGCAACCAGTCCCAGATATTGTGCCATTTTATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR CAA 90 bp TGGATAAAATGGCACAATATCTGGGACTGGTTGCAGAAGAATCCAGAGGGAAGTGCTGCAAACAGCTCTTaGGTCTCACAGGTCACGCTA +
Preference number: 5 (lower is better)
Translates to: WIKWHNIWDWLQKNPEGSAANSS*VSQVTL
Trigger: TAGCGTGACCTGTGAGACCAAAGAGCTGTTTGCAGC...ACTTCCCTCTGGATTCTTCTGCAACCAGTCCCAGATATTGTGCCATTTTATCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR CAA 90 bp TTTCAACCATTTAACATAAGCTATAGGCTATACCTCCTAACTACAGACTGTACAAGGGCGCAGTCCCCGTaGGGCAGGTCACTGAAGCTG +
Preference number: 5 (lower is better)
Translates to: FQPFNISYRLYLLTTDCTRAQSP*GRSLKL
Trigger: CAGCTTCAGTGACCTGCCCAACGGGGACTGCGCCCT...TGTACAGTCTGTAGTTAGGAGGTATAGCCTATAGCTTATGTTAAATGGTTGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CAA 90 bp GATATGTACACGATAAGTTCACAGTTGAAAGAACCATTTGCCAGAAGCCTGGCACCTTCAGGTGTGACTTaGGCTCTTGGCCTTCTCCCA +
Preference number: 5 (lower is better)
Translates to: DMYTISSQLKEPFARSLAPSGVT*ALGLLP
Trigger: TGGGAGAAGGCCAAGAGCCAAAGTCACACCTGAAGG...TGCCAGGCTTCTGGCAAATGGTTCTTTCAACTGTGAACTTATCGTGTACATATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CAA 90 bp GATAAGTTCACAGTTGAAAGAACCATTTGCCAGAAGCCTGGCAAACAATTTGCATCCAGTTCCACAGGCTaGAGCTCAGAGGCCTCCTCA +
Preference number: 5 (lower is better)
Translates to: DKFTVERTICQKPGKQFASSSTG*SSEASS
Trigger: TGAGGAGGCCTCTGAGCTCAAGCCTGTGGAACTGGA...TGCAAATTGTTTGCCAGGCTTCTGGCAAATGGTTCTTTCAACTGTGAACTTATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CAA 90 bp GCATTCTATAATGCTGGCCACATGCAGAAACATTACAAGCAAAACAATGCCAGTTCCAGTTCCACAGGCTaGAGCTCAGAGGCCTCCTCA +
Preference number: 5 (lower is better)
Translates to: AFYNAGHMQKHYKQNNASSSSTG*SSEASS
Trigger: TGAGGAGGCCTCTGAGCTCAAGCCTGTGGAACTGGA...ACTGGCATTGTTTTGCTTGTAATGTTTCTGCATGTGGCCAGCATTATAGAATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR CAA 90 bp GTGATTTCCCTGGGGGCAGTAACCACCCCTCAGGATGTCCTTCTTTCTAATCCCCAAATTCATGACTTCTaGGTTCAGATCCTGAAACTC +
Preference number: 5 (lower is better)
Translates to: VISLGAVTTPQDVLLSNPQIHDF*VQILKL
Trigger: GAGTTTCAGGATCTGAACCAAGAAGTCATGAATTTG...GGGATTAGAAAGAAGGACATCCTGAGGGGTGGTTACTGCCCCCAGGGAAATCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CAA 90 bp GGCATCATGGGAGCAATCCCATTCTCTGGCCTGGAGCATTCTATAATGCTGGCCCAAATTCATGACTTCTaGGTTCAGATCCTGAAACTC +
Preference number: 5 (lower is better)
Translates to: GIMGAIPFSGLEHSIMLAQIHDF*VQILKL
Trigger: GAGTTTCAGGATCTGAACCAAGAAGTCATGAATTTG...GGCCAGCATTATAGAATGCTCCAGGCCAGAGAATGGGATTGCTCCCATGATGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR CAA 90 bp GATAAGTTCACAGTTGAAAGAACCATTTGCCAGAAGCCTGGCAAACAATTTGCAATGTCCAGGCTCTCGTaGCCTGTGGTCAGTGGGAGA +
Preference number: 5 (lower is better)
Translates to: DKFTVERTICQKPGKQFAMSRLS*PVVSGR
Trigger: TCTCCCACTGACCACAGGCAACGAGAGCCTGGACAT...TGCAAATTGTTTGCCAGGCTTCTGGCAAATGGTTCTTTCAACTGTGAACTTATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CAA 90 bp GATAAGTTCACAGTTGAAAGAACCATTTGCCAGAAGCCTGGCAAACAATTTGCACTGAACCATGGAAACTaGCCTGGCCAGCTGGCTCAG +
Preference number: 5 (lower is better)
Translates to: DKFTVERTICQKPGKQFALNHGN*PGQLAQ
Trigger: CTGAGCCAGCTGGCCAGGCAAGTTTCCATGGTTCAG...TGCAAATTGTTTGCCAGGCTTCTGGCAAATGGTTCTTTCAACTGTGAACTTATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CAA 90 bp GAACTATTTGGCCAGGGAATCCTACCAGTGAGTGATTTCCCTGGGGGCAGTAACGCTGGAGGTTTGTCTTaGTTAGTGCTTCACAGTAAT +
Preference number: 5 (lower is better)
Translates to: ELFGQGILPVSDFPGGSNAGGLS*LVLHSN
Trigger: ATTACTGTGAAGCACTAACAAAGACAAACCTCCAGC...GTTACTGCCCCCAGGGAAATCACTCACTGGTAGGATTCCCTGGCCAAATAGTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CAA 90 bp GTGATTTCCCTGGGGGCAGTAACCACCCCTCAGGATGTCCTTCTTTCTAATCCCACGATAAGTTCACAGTaGAAAGAACCATTTGCCAGA +
Preference number: 5 (lower is better)
Translates to: VISLGAVTTPQDVLLSNPTISSQ*KEPFAR
Trigger: TCTGGCAAATGGTTCTTTCAACTGTGAACTTATCGT...GGGATTAGAAAGAAGGACATCCTGAGGGGTGGTTACTGCCCCCAGGGAAATCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CAA 90 bp TGCAGAAGAATCCAGAGGGAAGTCAGCAGGTTGAAGAATAGGAAACAAGATTGGAGCAAGGAAGGCAGTTaGAGCGAGTTACTTCCCCAG +
Preference number: 5 (lower is better)
Translates to: CRRIQREVSRLKNRKQDWSKEGS*SELLPQ
Trigger: CTGGGGAAGTAACTCGCTCAAACTGCCTTCCTTGCT...CCAATCTTGTTTCCTATTCTTCAACCTGCTGACTTCCCTCTGGATTCTTCTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378023.8
ENST00000540914.5
CDS-3UTR CAA 90 bp GATAAAATGGCACAATATCTGGGACTGGTTGCAGAAGAATCCAGAGGGAAGTCAAGCAAGGAAGGCAGTTaGAGCGAGTTACTTCCCCAG +
Preference number: 5 (lower is better)
Translates to: DKMAQYLGLVAEESRGKSSKEGS*SELLPQ
Trigger: CTGGGGAAGTAACTCGCTCAAACTGCCTTCCTTGCT...TGACTTCCCTCTGGATTCTTCTGCAACCAGTCCCAGATATTGTGCCATTTTATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378023.8
ENST00000540914.5
CDS-3UTR CAA 90 bp GGCCATGAGTTGATCACTGAGGAGGTTGAGGGATGGGCACACTGGGATCCATTATGTCATCAGGTAGATTaGAAAAGAAGGAGTGGTCTT +
Preference number: 5 (lower is better)
Translates to: GHELITEEVEGWAHWDPLCHQVD*KRRSGL
Trigger: AAGACCACTCCTTCTTTTCAAATCTACCTGATGACA...TAATGGATCCCAGTGTGCCCATCCCTCAACCTCCTCAGTGATCAACTCATGGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR CAA 90 bp GGGGTGGGTCGAATGGGACAAATTCTGCAAGTTAGAAGCACTAAATGTCCTCCAGAAAGAATGAATGCCTaGGGCATGACAAGAAGCAGC +
Preference number: 5 (lower is better)
Translates to: GVGRMGQILQVRSTKCPPERMNA*GMTRSS
Trigger: GCTGCTTCTTGTCATGCCCAAGGCATTCATTCTTTC...TGGAGGACATTTAGTGCTTCTAACTTGCAGAATTTGTCCCATTCGACCCACCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000645100.1
ENST00000647136.1
CDS-3UTR CAA 90 bp AATGGCACAATATCTGGGACTGGTTGCAGAAGAATCCAGAGGGAAGTCAGCAGGGTCAACCACAAAGCCTaGGGAAACAGAACTGCTATA +
Preference number: 5 (lower is better)
Translates to: NGTISGTGCRRIQREVSRVNHKA*GNRTAI
Trigger: TATAGCAGTTCTGTTTCCCAAGGCTTTGTGGTTGAC...CCTGCTGACTTCCCTCTGGATTCTTCTGCAACCAGTCCCAGATATTGTGCCATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510784.8
ENST00000540914.5
CDS TCA 90 bp CAGAGGTGTTCAGGAAATCAAAGCTTTCTAAAGCACTTTCAACTGTaGGACTTAAACTGGAAGACCTGCTGCGGCTTACTGCTGGCTTGC +
Preference number: 5 (lower is better)
Translates to: QRCSGNQSFLKHFQL*DLNWKTCCGLLLAC
Trigger: GCAAGCCAGCAGTAAGCCGCAGCAGGTCTTCCAGTTTAAGTCTCACAGTTGAAAGTGCTTTAGAAAGCTTTGATTTCCTGAACACCTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS TCA 90 bp GGGGACAGGCTAGCAGGAAAAAGGGTAAATAGTTACTGCCCAGATTaGAGACTCCAAAGTGGGCAGACAACAAATCGGTATGTTTGCAGA +
Preference number: 5 (lower is better)
Translates to: GDRLAGKRVNSYCPD*RLQSGQTTNRYVCR
Trigger: TCTGCAAACATACCGATTTGTTGTCTGCCCACTTTGGAGTCTTCAATCTGGGCAGTAACTATTTACCCTTTTTCCTGCTAGCCTGTCCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378023.8
ENST00000540914.5
CDS-3UTR CAA 90 bp CATTTTTATTTCAGTTGTCGTGTCTCTCAGGCTCTAAACAATTTCCAGCCCAAAAACGACGACGGCTCCTaGTCATGTCAGGGGCACACT +
Preference number: 5 (lower is better)
Translates to: HFYFSCRVSQALNNFQPKNDDGS*SCQGHT
Trigger: AGTGTGCCCCTGACATGACAAGGAGCCGTCGTCGTT...TTTGGGCTGGAAATTGTTTAGAGCCTGAGAGACACGACAACTGAAATAAAAATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000259698.9
CDS-3UTR CAA 90 bp ATAAAATGGCACAATATCTGGGACTGGTTGCAGAAGAATCCAGAGGGAAGTCAGCTTCTAATGATCCCATaGGGCCCTCCAGGCGAAAAA +
Preference number: 5 (lower is better)
Translates to: IKWHNIWDWLQKNPEGSQLLMIP*GPPGEK
Trigger: TTTTTCGCCTGGAGGGCCCAATGGGATCATTAGAAG...CTGACTTCCCTCTGGATTCTTCTGCAACCAGTCCCAGATATTGTGCCATTTTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR CAA 90 bp TGCAGAAGAATCCAGAGGGAAGTCAGCAGGTTGAAGAATAGGAAACAAGATTGGCTTCTAATGATCCCATaGGGCCCTCCAGGCGAAAAA +
Preference number: 5 (lower is better)
Translates to: CRRIQREVSRLKNRKQDWLLMIP*GPPGEK
Trigger: TTTTTCGCCTGGAGGGCCCAATGGGATCATTAGAAG...CCAATCTTGTTTCCTATTCTTCAACCTGCTGACTTCCCTCTGGATTCTTCTGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR CAA 90 bp GATATGTACACGATAAGTTCACAGTTGAAAGAACCATTTGCCAGAAGCCTGGCAAAGGCTTGCTTCATTTaGCTGGCACCATCCTGGAGG +
Preference number: 5 (lower is better)
Translates to: DMYTISSQLKEPFARSLAKACFI*LAPSWR
Trigger: CCTCCAGGATGGTGCCAGCAAAATGAAGCAAGCCTT...TGCCAGGCTTCTGGCAAATGGTTCTTTCAACTGTGAACTTATCGTGTACATATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CAA 90 bp GATATGTACACGATAAGTTCACAGTTGAAAGAACCATTTGCCAGAAGCCTGGCAGGATGTTGCGAAGGCTaGCTTCATTTTGCTGGCACC +
Preference number: 5 (lower is better)
Translates to: DMYTISSQLKEPFARSLAGCCEG*LHFAGT
Trigger: GGTGCCAGCAAAATGAAGCAAGCCTTCGCAACATCC...TGCCAGGCTTCTGGCAAATGGTTCTTTCAACTGTGAACTTATCGTGTACATATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CAA 90 bp TGCAGAAGAATCCAGAGGGAAGTCAGCAGGTTGAAGAATAGGAAACAAGATTGGTCCTTGAAGCTCCGATaGATCTCTGTCAGACTCTCC +
Preference number: 5 (lower is better)
Translates to: CRRIQREVSRLKNRKQDWSLKLR*ISVRLS
Trigger: GGAGAGTCTGACAGAGATCAATCGGAGCTTCAAGGA...CCAATCTTGTTTCCTATTCTTCAACCTGCTGACTTCCCTCTGGATTCTTCTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR CAA 90 bp GGGACTGGTTGCAGAAGAATCCAGAGGGAAGTCAGCAGGTTGAAGAATAGGAAATTCTCTGTGTACTCCTaGAAGCTCCGATTGATCTCT +
Preference number: 5 (lower is better)
Translates to: GTGCRRIQREVSRLKNRKFSVYS*KLRLIS
Trigger: AGAGATCAATCGGAGCTTCAAGGAGTACACAGAGAA...TTTCCTATTCTTCAACCTGCTGACTTCCCTCTGGATTCTTCTGCAACCAGTCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR CAA 90 bp TCTGGCCTGGAGCATTCTATAATGCTGGCCACATGCAGAAACATTACAAGCAAAGCCAGACCTTTCATCTaGATGGAGAATTCTCCCAGC +
Preference number: 5 (lower is better)
Translates to: SGLEHSIMLATCRNITSKARPFI*MENSPS
Trigger: GCTGGGAGAATTCTCCATCAAGATGAAAGGTCTGGC...TTTGCTTGTAATGTTTCTGCATGTGGCCAGCATTATAGAATGCTCCAGGCCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR CAA 90 bp GCAATCCCATTCTCTGGCCTGGAGCATTCTATAATGCTGGCCACATGCAGAAACCCATTTACTTCTATTTaGCCTTTCAGTTTCCACCGC +
Preference number: 5 (lower is better)
Translates to: AIPFSGLEHSIMLATCRNPFTSI*PFSFHR
Trigger: GCGGTGGAAACTGAAAGGCAAAATAGAAGTAAATGG...GTTTCTGCATGTGGCCAGCATTATAGAATGCTCCAGGCCAGAGAATGGGATTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR CAA 90 bp AAATGGCACAATATCTGGGACTGGTTGCAGAAGAATCCAGAGGGAAGTCAGCAGCCATCCCAGCTCTGCTaGCCATTTACTTCTATTTTG +
Preference number: 5 (lower is better)
Translates to: KWHNIWDWLQKNPEGSQQPSQLC*PFTSIL
Trigger: CAAAATAGAAGTAAATGGCAAGCAGAGCTGGGATGG...CTGCTGACTTCCCTCTGGATTCTTCTGCAACCAGTCCCAGATATTGTGCCATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR CAA 90 bp TGGATAAAATGGCACAATATCTGGGACTGGTTGCAGAAGAATCCAGAGGGAAGTTTGAGCTCCGTGACCTaGATGGAGATGAACCCAACT +
Preference number: 5 (lower is better)
Translates to: WIKWHNIWDWLQKNPEGSLSSVT*MEMNPT
Trigger: AGTTGGGTTCATCTCCATCAAGGTCACGGAGCTCAA...ACTTCCCTCTGGATTCTTCTGCAACCAGTCCCAGATATTGTGCCATTTTATCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR CAA 90 bp TCTGGCCTGGAGCATTCTATAATGCTGGCCACATGCAGAAACATTACAAGCAAATTGAGCTCCGTGACCTaGATGGAGATGAACCCAACT +
Preference number: 5 (lower is better)
Translates to: SGLEHSIMLATCRNITSKLSSVT*MEMNPT
Trigger: AGTTGGGTTCATCTCCATCAAGGTCACGGAGCTCAA...TTTGCTTGTAATGTTTCTGCATGTGGCCAGCATTATAGAATGCTCCAGGCCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR CAA 90 bp GATATGTACACGATAAGTTCACAGTTGAAAGAACCATTTGCCAGAAGCCTGGCAGCTGCAAACAGCTCTTaGGTCTCACAGGTCACGCTA +
Preference number: 5 (lower is better)
Translates to: DMYTISSQLKEPFARSLAAANSS*VSQVTL
Trigger: TAGCGTGACCTGTGAGACCAAAGAGCTGTTTGCAGC...TGCCAGGCTTCTGGCAAATGGTTCTTTCAACTGTGAACTTATCGTGTACATATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CAA 90 bp GCATTCTATAATGCTGGCCACATGCAGAAACATTACAAGCAAAACAATGCCAGTAAGAAGGAGTGGTCTTaGAAGGTGGGCGTTTCCGGG +
Preference number: 5 (lower is better)
Translates to: AFYNAGHMQKHYKQNNASKKEWS*KVGVSG
Trigger: CCCGGAAACGCCCACCTTCAAAGACCACTCCTTCTT...ACTGGCATTGTTTTGCTTGTAATGTTTCTGCATGTGGCCAGCATTATAGAATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR CAA 90 bp GATAAGTTCACAGTTGAAAGAACCATTTGCCAGAAGCCTGGCAAACAATTTGCACCTTCAGGTGTGACTTaGGCTCTTGGCCTTCTCCCA +
Preference number: 5 (lower is better)
Translates to: DKFTVERTICQKPGKQFAPSGVT*ALGLLP
Trigger: TGGGAGAAGGCCAAGAGCCAAAGTCACACCTGAAGG...TGCAAATTGTTTGCCAGGCTTCTGGCAAATGGTTCTTTCAACTGTGAACTTATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CAA 90 bp GATATGTACACGATAAGTTCACAGTTGAAAGAACCATTTGCCAGAAGCCTGGCAAATTTGCTGCACGAGTaGGGTGCAGTACTGGAGGTG +
Preference number: 5 (lower is better)
Translates to: DMYTISSQLKEPFARSLANLLHE*GAVLEV
Trigger: CACCTCCAGTACTGCACCCAACTCGTGCAGCAAATT...TGCCAGGCTTCTGGCAAATGGTTCTTTCAACTGTGAACTTATCGTGTACATATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CAA 90 bp ATTACACTCACATATATTGTTTTGATACCTTGGCATACCCCACCTTGTACACTCCTGAACCATGGAAACTaGCCTGGCCAGCTGGCTCAG +
Preference number: 5 (lower is better)
Translates to: ITLTYIVLIPWHTPPCTLLNHGN*PGQLAQ
Trigger: CTGAGCCAGCTGGCCAGGCAAGTTTCCATGGTTCAG...GAGTGTACAAGGTGGGGTATGCCAAGGTATCAAAACAATATATGTGAGTGTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CAA 90 bp TTTCAACCATTTAACATAAGCTATAGGCTATACCTCCTAACTACAGACTGTACATGCTGGGCCAGGAGGTaGCTGGGAGCAAGGTCACTC +
Preference number: 5 (lower is better)
Translates to: FQPFNISYRLYLLTTDCTCWARR*LGARSL
Trigger: GAGTGACCTTGCTCCCAGCAACCTCCTGGCCCAGCA...TGTACAGTCTGTAGTTAGGAGGTATAGCCTATAGCTTATGTTAAATGGTTGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CAA 90 bp GAACTATTTGGCCAGGGAATCCTACCAGTGAGTGATTTCCCTGGGGGCAGTAACTTCTTCAGTATCAGATaGACACAATGTCACCAGCAT +
Preference number: 5 (lower is better)
Translates to: ELFGQGILPVSDFPGGSNFFSIR*TQCHQH
Trigger: ATGCTGGTGACATTGTGTCAATCTGATACTGAAGAA...GTTACTGCCCCCAGGGAAATCACTCACTGGTAGGATTCCCTGGCCAAATAGTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CAA 90 bp ATGTTTGAACTATTTGGCCAGGGAATCCTACCAGTGAGTGATTTCCCTGGGGGCCAGTCTCGAGGAAATTaGTCCAATTGTTCATATGCC +
Preference number: 5 (lower is better)
Translates to: MFELFGQGILPVSDFPGGQSRGN*SNCSYA
Trigger: GGCATATGAACAATTGGACAAATTTCCTCGAGACTG...GCCCCCAGGGAAATCACTCACTGGTAGGATTCCCTGGCCAAATAGTTCAAACAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CAA 90 bp ATGTTTGAACTATTTGGCCAGGGAATCCTACCAGTGAGTGATTTCCCTGGGGGCTATTGTTTTGATACCTaGGCATACCCCACCTTGTAC +
Preference number: 5 (lower is better)
Translates to: MFELFGQGILPVSDFPGGYCFDT*AYPTLY
Trigger: GTACAAGGTGGGGTATGCCAAGGTATCAAAACAATA...GCCCCCAGGGAAATCACTCACTGGTAGGATTCCCTGGCCAAATAGTTCAAACAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CAA 90 bp GAACTATTTGGCCAGGGAATCCTACCAGTGAGTGATTTCCCTGGGGGCAGTAACTGTCATCAGGTAGATTaGAAAAGAAGGAGTGGTCTT +
Preference number: 5 (lower is better)
Translates to: ELFGQGILPVSDFPGGSNCHQVD*KRRSGL
Trigger: AAGACCACTCCTTCTTTTCAAATCTACCTGATGACA...GTTACTGCCCCCAGGGAAATCACTCACTGGTAGGATTCCCTGGCCAAATAGTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000538035.6
ENST00000643898.2
CDS-3UTR CAA 90 bp CATGAGTTGATCACTGAGGAGGTTGAGGGATGGGCACACTGGGATCCATTAGAGTGTCATCAGGTAGATTaGAAAAGAAGGAGTGGTCTT +
Preference number: 5 (lower is better)
Translates to: HELITEEVEGWAHWDPLECHQVD*KRRSGL
Trigger: AAGACCACTCCTTCTTTTCAAATCTACCTGATGACA...CTCTAATGGATCCCAGTGTGCCCATCCCTCAACCTCCTCAGTGATCAACTCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS TCA 90 bp ATGACTTCAGCAGGGGATCAGAGCTTTAGAGCTTCATCATTCATGTaGGCCAAGTGCGAAATTTCAGCCTGTCTCTCCTCTAAATGCAGT +
Preference number: 5 (lower is better)
Translates to: MTSAGDQSFRASSFM*AKCEISACLSSKCS
Trigger: ACTGCATTTAGAGGAGAGACAGGCTGAAATTTCGCACTTGGCTCACATGAATGATGAAGCTCTAAAGCTCTGATCCCCTGCTGAAGTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606385.1
CDS GCA 90 bp ATGTTCTCATCACTGACAGCTGCGAGTTTCTCCATCACTTGGATCTaGCTAGAAAGCTTCTCTAAGAGACTTCTTGCCACAAATGGGGTT +
Preference number: 5 (lower is better)
Translates to: MFSSLTAASFSITWI*LESFSKRLLATNGV
Trigger: AACCCCATTTGTGGCAAGAAGTCTCTTAGAGAAGCTTTCTAGGCAGATCCAAGTGATGGAGAAACTCGCAGCTGTCAGTGATGAGAACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259698.9
ENST00000463828.1
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CAA 90 bp GTACAACCATGGATAAAATGGCACAATATCTGGGACTGGTTGCAGAAGAATCCACTTCTAATGATCCCATaGGGCCCTCCAGGCGAAAAA +
Preference number: 5 (lower is better)
Translates to: VQPWIKWHNIWDWLQKNPLLMIP*GPPGEK
Trigger: TTTTTCGCCTGGAGGGCCCAATGGGATCATTAGAAG...TGGATTCTTCTGCAACCAGTCCCAGATATTGTGCCATTTTATCCATGGTTGTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
CDS-3UTR CAA 90 bp GATATGTACACGATAAGTTCACAGTTGAAAGAACCATTTGCCAGAAGCCTGGCATCCTTGAAGCTCCGATaGATCTCTGTCAGACTCTCC +
Preference number: 5 (lower is better)
Translates to: DMYTISSQLKEPFARSLASLKLR*ISVRLS
Trigger: GGAGAGTCTGACAGAGATCAATCGGAGCTTCAAGGA...TGCCAGGCTTCTGGCAAATGGTTCTTTCAACTGTGAACTTATCGTGTACATATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CAA 90 bp AAAATGGCACAATATCTGGGACTGGTTGCAGAAGAATCCAGAGGGAAGTCAGCATTCTCTGTGTACTCCTaGAAGCTCCGATTGATCTCT +
Preference number: 5 (lower is better)
Translates to: KMAQYLGLVAEESRGKSAFSVYS*KLRLIS
Trigger: AGAGATCAATCGGAGCTTCAAGGAGTACACAGAGAA...TGCTGACTTCCCTCTGGATTCTTCTGCAACCAGTCCCAGATATTGTGCCATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR CAA 90 bp TCCAAATATTCAAGAGGATGCTGGGGTGGGTCGAATGGGACAAATTCTGCAAGTTTCTCTGTGTACTCCTaGAAGCTCCGATTGATCTCT +
Preference number: 5 (lower is better)
Translates to: SKYSRGCWGGSNGTNSASFSVYS*KLRLIS
Trigger: AGAGATCAATCGGAGCTTCAAGGAGTACACAGAGAA...ACTTGCAGAATTTGTCCCATTCGACCCACCCCAGCATCCTCTTGAATATTTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR CAA 90 bp GATATGTACACGATAAGTTCACAGTTGAAAGAACCATTTGCCAGAAGCCTGGCAGCCAGACCTTTCATCTaGATGGAGAATTCTCCCAGC +
Preference number: 5 (lower is better)
Translates to: DMYTISSQLKEPFARSLAARPFI*MENSPS
Trigger: GCTGGGAGAATTCTCCATCAAGATGAAAGGTCTGGC...TGCCAGGCTTCTGGCAAATGGTTCTTTCAACTGTGAACTTATCGTGTACATATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CAA 90 bp GGGACTGGTTGCAGAAGAATCCAGAGGGAAGTCAGCAGGTTGAAGAATAGGAAACCATTTACTTCTATTTaGCCTTTCAGTTTCCACCGC +
Preference number: 5 (lower is better)
Translates to: GTGCRRIQREVSRLKNRKPFTSI*PFSFHR
Trigger: GCGGTGGAAACTGAAAGGCAAAATAGAAGTAAATGG...TTTCCTATTCTTCAACCTGCTGACTTCCCTCTGGATTCTTCTGCAACCAGTCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR CAA 90 bp AAATGGCACAATATCTGGGACTGGTTGCAGAAGAATCCAGAGGGAAGTCAGCAGCCATTTACTTCTATTTaGCCTTTCAGTTTCCACCGC +
Preference number: 5 (lower is better)
Translates to: KWHNIWDWLQKNPEGSQQPFTSI*PFSFHR
Trigger: GCGGTGGAAACTGAAAGGCAAAATAGAAGTAAATGG...CTGCTGACTTCCCTCTGGATTCTTCTGCAACCAGTCCCAGATATTGTGCCATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR CAA 90 bp TCCAAATATTCAAGAGGATGCTGGGGTGGGTCGAATGGGACAAATTCTGCAAGTCCATCCCAGCTCTGCTaGCCATTTACTTCTATTTTG +
Preference number: 5 (lower is better)
Translates to: SKYSRGCWGGSNGTNSASPSQLC*PFTSIL
Trigger: CAAAATAGAAGTAAATGGCAAGCAGAGCTGGGATGG...ACTTGCAGAATTTGTCCCATTCGACCCACCCCAGCATCCTCTTGAATATTTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR CAA 90 bp GATATGTACACGATAAGTTCACAGTTGAAAGAACCATTTGCCAGAAGCCTGGCATTGAGCTCCGTGACCTaGATGGAGATGAACCCAACT +
Preference number: 5 (lower is better)
Translates to: DMYTISSQLKEPFARSLALSSVT*MEMNPT
Trigger: AGTTGGGTTCATCTCCATCAAGGTCACGGAGCTCAA...TGCCAGGCTTCTGGCAAATGGTTCTTTCAACTGTGAACTTATCGTGTACATATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CAA 90 bp CATTTTTATTTCAGTTGTCGTGTCTCTCAGGCTCTAAACAATTTCCAGCCCAAAAAGAAGGAGTGGTCTTaGAAGGTGGGCGTTTCCGGG +
Preference number: 5 (lower is better)
Translates to: HFYFSCRVSQALNNFQPKKKEWS*KVGVSG
Trigger: CCCGGAAACGCCCACCTTCAAAGACCACTCCTTCTT...TTTGGGCTGGAAATTGTTTAGAGCCTGAGAGACACGACAACTGAAATAAAAATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CAA 90 bp CTCCACTCCTACTCCATTAGGATTTCTCTGACTTCTAGGTTCCTCCACCTCAAACCTGGATATTCTTTGTaGACAGTTCTGGCAAAGCTG +
Preference number: 5 (lower is better)
Translates to: LHSYSIRISLTSRFLHLKPGYSL*TVLAKL
Trigger: CAGCTTTGCCAGAACTGTCAACAAAGAATATCCAGG...TTTGAGGTGGAGGAACCTAGAAGTCAGAGAAATCCTAATGGAGTAGGAGTGGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CAA 90 bp ATGTTTGAACTATTTGGCCAGGGAATCCTACCAGTGAGTGATTTCCCTGGGGGCACATTTTTATTTCAGTaGTCGTGTCTCTCAGGCTCT +
Preference number: 5 (lower is better)
Translates to: MFELFGQGILPVSDFPGGTFLFQ*SCLSGS
Trigger: AGAGCCTGAGAGACACGACAACTGAAATAAAAATGT...GCCCCCAGGGAAATCACTCACTGGTAGGATTCCCTGGCCAAATAGTTCAAACAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CAA 90 bp GAACTATTTGGCCAGGGAATCCTACCAGTGAGTGATTTCCCTGGGGGCAGTAACGAATGGTCTTGTACTTaGCTTAATGAACTTGCATCT +
Preference number: 5 (lower is better)
Translates to: ELFGQGILPVSDFPGGSNEWSCT*LNELAS
Trigger: AGATGCAAGTTCATTAAGCAAAGTACAAGACCATTC...GTTACTGCCCCCAGGGAAATCACTCACTGGTAGGATTCCCTGGCCAAATAGTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CAA 90 bp ATCATGGGAGCAATCCCATTCTCTGGCCTGGAGCATTCTATAATGCTGGCCACATGTCATCAGGTAGATTaGAAAAGAAGGAGTGGTCTT +
Preference number: 5 (lower is better)
Translates to: IMGAIPFSGLEHSIMLATCHQVD*KRRSGL
Trigger: AAGACCACTCCTTCTTTTCAAATCTACCTGATGACA...TGTGGCCAGCATTATAGAATGCTCCAGGCCAGAGAATGGGATTGCTCCCATGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000645100.1
ENST00000647136.1
CDS-3UTR CAA 90 bp GCAATCCCATTCTCTGGCCTGGAGCATTCTATAATGCTGGCCACATGCAGAAACTGTCATCAGGTAGATTaGAAAAGAAGGAGTGGTCTT +
Preference number: 5 (lower is better)
Translates to: AIPFSGLEHSIMLATCRNCHQVD*KRRSGL
Trigger: AAGACCACTCCTTCTTTTCAAATCTACCTGATGACA...GTTTCTGCATGTGGCCAGCATTATAGAATGCTCCAGGCCAGAGAATGGGATTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000645100.1
ENST00000647136.1
CDS-3UTR CAA 90 bp TCTGGCCTGGAGCATTCTATAATGCTGGCCACATGCAGAAACATTACAAGCAAAAAGATTGGCCATGAGTaGATCACTGAGGAGGTTGAG +
Preference number: 5 (lower is better)
Translates to: SGLEHSIMLATCRNITSKKIGHE*ITEEVE
Trigger: CTCAACCTCCTCAGTGATCAACTCATGGCCAATCTT...TTTGCTTGTAATGTTTCTGCATGTGGCCAGCATTATAGAATGCTCCAGGCCAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000510784.8
ENST00000540914.5
CDS-3UTR CAA 90 bp ACAATATCTGGGACTGGTTGCAGAAGAATCCAGAGGGAAGTCAGCAGGTTGAAGAGGGAAGTCAGCAGGTaGAAGAATAGGAAACAAGAT +
Preference number: 5 (lower is better)
Translates to: TISGTGCRRIQREVSRLKREVSR*KNRKQD
Trigger: ATCTTGTTTCCTATTCTTCAACCTGCTGACTTCCCT...CTTCAACCTGCTGACTTCCCTCTGGATTCTTCTGCAACCAGTCCCAGATATTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR CAA 90 bp ATAAAATGGCACAATATCTGGGACTGGTTGCAGAAGAATCCAGAGGGAAGTCAGAATATCTGGGACTGGTaGCAGAAGAATCCAGAGGGA +
Preference number: 5 (lower is better)
Translates to: IKWHNIWDWLQKNPEGSQNIWDW*QKNPEG
Trigger: TCCCTCTGGATTCTTCTGCAACCAGTCCCAGATATT...CTGACTTCCCTCTGGATTCTTCTGCAACCAGTCCCAGATATTGTGCCATTTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR CAA 90 bp TCTGGCCTGGAGCATTCTATAATGCTGGCCACATGCAGAAACATTACAAGCAAAAATATCTGGGACTGGTaGCAGAAGAATCCAGAGGGA +
Preference number: 5 (lower is better)
Translates to: SGLEHSIMLATCRNITSKNIWDW*QKNPEG
Trigger: TCCCTCTGGATTCTTCTGCAACCAGTCCCAGATATT...TTTGCTTGTAATGTTTCTGCATGTGGCCAGCATTATAGAATGCTCCAGGCCAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000510784.8
ENST00000540914.5
CDS-3UTR CAA 90 bp GATAAAATGGCACAATATCTGGGACTGGTTGCAGAAGAATCCAGAGGGAAGTCAGAAAGAATGAATGCCTaGGGCATGACAAGAAGCAGC +
Preference number: 5 (lower is better)
Translates to: DKMAQYLGLVAEESRGKSERMNA*GMTRSS
Trigger: GCTGCTTCTTGTCATGCCCAAGGCATTCATTCTTTC...TGACTTCCCTCTGGATTCTTCTGCAACCAGTCCCAGATATTGTGCCATTTTATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510784.8
ENST00000540914.5
CDS-3UTR CAA 90 bp ATATTCAAGAGGATGCTGGGGTGGGTCGAATGGGACAAATTCTGCAAGTTAGAAGAAAGAATGAATGCCTaGGGCATGACAAGAAGCAGC +
Preference number: 5 (lower is better)
Translates to: IFKRMLGWVEWDKFCKLEERMNA*GMTRSS
Trigger: GCTGCTTCTTGTCATGCCCAAGGCATTCATTCTTTC...TTCTAACTTGCAGAATTTGTCCCATTCGACCCACCCCAGCATCCTCTTGAATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000645100.1
ENST00000647136.1
CDS TCA 90 bp ACGTCTTTCGGTCTTTTAAATCACAGTTGTCTCATTCACCCTCAGTaGTCTCCGTCCAAGAGGCAGCACCATTTAGTTTCTGATCGTCAA +
Preference number: 5 (lower is better)
Translates to: TSFGLLNHSCLIHPQ*SPSKRQHHLVSDRQ
Trigger: TTGACGATCAGAAACTAAATGGTGCTGCCTCTTGGACGGAGATCACTGAGGGTGAATGAGACAACTGTGATTTAAAAGACCGAAAGACGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000473070.1
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR CAA 90 bp GATAAGTTCACAGTTGAAAGAACCATTTGCCAGAAGCCTGGCAAACAATTTGCACTTCTAATGATCCCATaGGGCCCTCCAGGCGAAAAA +
Preference number: 5 (lower is better)
Translates to: DKFTVERTICQKPGKQFALLMIP*GPPGEK
Trigger: TTTTTCGCCTGGAGGGCCCAATGGGATCATTAGAAG...TGCAAATTGTTTGCCAGGCTTCTGGCAAATGGTTCTTTCAACTGTGAACTTATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CAA 90 bp CATTTTTATTTCAGTTGTCGTGTCTCTCAGGCTCTAAACAATTTCCAGCCCAAAAAGGCTTGCTTCATTTaGCTGGCACCATCCTGGAGG +
Preference number: 5 (lower is better)
Translates to: HFYFSCRVSQALNNFQPKKACFI*LAPSWR
Trigger: CCTCCAGGATGGTGCCAGCAAAATGAAGCAAGCCTT...TTTGGGCTGGAAATTGTTTAGAGCCTGAGAGACACGACAACTGAAATAAAAATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CAA 90 bp CATTTTTATTTCAGTTGTCGTGTCTCTCAGGCTCTAAACAATTTCCAGCCCAAATGCTGGCAGGGGATGTaGCGAAGGCTTGCTTCATTT +
Preference number: 5 (lower is better)
Translates to: HFYFSCRVSQALNNFQPKCWQGM*RRLASF
Trigger: AAATGAAGCAAGCCTTCGCAACATCCCCTGCCAGCA...TTTGGGCTGGAAATTGTTTAGAGCCTGAGAGACACGACAACTGAAATAAAAATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CAA 90 bp ATTACACTCACATATATTGTTTTGATACCTTGGCATACCCCACCTTGTACACTCTGCTGGCAGGGGATGTaGCGAAGGCTTGCTTCATTT +
Preference number: 5 (lower is better)
Translates to: ITLTYIVLIPWHTPPCTLCWQGM*RRLASF
Trigger: AAATGAAGCAAGCCTTCGCAACATCCCCTGCCAGCA...GAGTGTACAAGGTGGGGTATGCCAAGGTATCAAAACAATATATGTGAGTGTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CAA 90 bp GATAAAATGGCACAATATCTGGGACTGGTTGCAGAAGAATCCAGAGGGAAGTCATTCTCTGTGTACTCCTaGAAGCTCCGATTGATCTCT +
Preference number: 5 (lower is better)
Translates to: DKMAQYLGLVAEESRGKSFSVYS*KLRLIS
Trigger: AGAGATCAATCGGAGCTTCAAGGAGTACACAGAGAA...TGACTTCCCTCTGGATTCTTCTGCAACCAGTCCCAGATATTGTGCCATTTTATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR CAA 90 bp GAGCATTCTATAATGCTGGCCACATGCAGAAACATTACAAGCAAAACAATGCCAGCCAGACCTTTCATCTaGATGGAGAATTCTCCCAGC +
Preference number: 5 (lower is better)
Translates to: EHSIMLATCRNITSKTMPARPFI*MENSPS
Trigger: GCTGGGAGAATTCTCCATCAAGATGAAAGGTCTGGC...TGGCATTGTTTTGCTTGTAATGTTTCTGCATGTGGCCAGCATTATAGAATGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR CAA 90 bp TGCAGAAGAATCCAGAGGGAAGTCAGCAGGTTGAAGAATAGGAAACAAGATTGGCCATCCCAGCTCTGCTaGCCATTTACTTCTATTTTG +
Preference number: 5 (lower is better)
Translates to: CRRIQREVSRLKNRKQDWPSQLC*PFTSIL
Trigger: CAAAATAGAAGTAAATGGCAAGCAGAGCTGGGATGG...CCAATCTTGTTTCCTATTCTTCAACCTGCTGACTTCCCTCTGGATTCTTCTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR CAA 90 bp GATAAGTTCACAGTTGAAAGAACCATTTGCCAGAAGCCTGGCAAACAATTTGCATTGAGCTCCGTGACCTaGATGGAGATGAACCCAACT +
Preference number: 5 (lower is better)
Translates to: DKFTVERTICQKPGKQFALSSVT*MEMNPT
Trigger: AGTTGGGTTCATCTCCATCAAGGTCACGGAGCTCAA...TGCAAATTGTTTGCCAGGCTTCTGGCAAATGGTTCTTTCAACTGTGAACTTATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CAA 90 bp ATTACACTCACATATATTGTTTTGATACCTTGGCATACCCCACCTTGTACACTCGCTGCAAACAGCTCTTaGGTCTCACAGGTCACGCTA +
Preference number: 5 (lower is better)
Translates to: ITLTYIVLIPWHTPPCTLAANSS*VSQVTL
Trigger: TAGCGTGACCTGTGAGACCAAAGAGCTGTTTGCAGC...GAGTGTACAAGGTGGGGTATGCCAAGGTATCAAAACAATATATGTGAGTGTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CAA 90 bp ATATACAGATATGTACACGATAAGTTCACAGTTGAAAGAACCATTTGCCAGAAGCGGCTGCGGTGCAGCTaGGCAAAGAAAGTGTCTTGC +
Preference number: 5 (lower is better)
Translates to: IYRYVHDKFTVERTICQKRLRCS*AKKVSC
Trigger: GCAAGACACTTTCTTTGCCAAGCTGCACCGCAGCCG...CTTCTGGCAAATGGTTCTTTCAACTGTGAACTTATCGTGTACATATCTGTATAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259698.9
ENST00000613507.4
CDS-3UTR CAA 90 bp ATATACAGATATGTACACGATAAGTTCACAGTTGAAAGAACCATTTGCCAGAAGTCCAGTTCCACAGGCTaGAGCTCAGAGGCCTCCTCA +
Preference number: 5 (lower is better)
Translates to: IYRYVHDKFTVERTICQKSSSTG*SSEASS
Trigger: TGAGGAGGCCTCTGAGCTCAAGCCTGTGGAACTGGA...CTTCTGGCAAATGGTTCTTTCAACTGTGAACTTATCGTGTACATATCTGTATAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CAA 90 bp AAATGGCACAATATCTGGGACTGGTTGCAGAAGAATCCAGAGGGAAGTCAGCAGCAAATTCATGACTTCTaGGTTCAGATCCTGAAACTC +
Preference number: 5 (lower is better)
Translates to: KWHNIWDWLQKNPEGSQQQIHDF*VQILKL
Trigger: GAGTTTCAGGATCTGAACCAAGAAGTCATGAATTTG...CTGCTGACTTCCCTCTGGATTCTTCTGCAACCAGTCCCAGATATTGTGCCATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR CAA 90 bp GGGACTGGTTGCAGAAGAATCCAGAGGGAAGTCAGCAGGTTGAAGAATAGGAAACAAATTCATGACTTCTaGGTTCAGATCCTGAAACTC +
Preference number: 5 (lower is better)
Translates to: GTGCRRIQREVSRLKNRKQIHDF*VQILKL
Trigger: GAGTTTCAGGATCTGAACCAAGAAGTCATGAATTTG...TTTCCTATTCTTCAACCTGCTGACTTCCCTCTGGATTCTTCTGCAACCAGTCCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR CAA 90 bp ATATACAGATATGTACACGATAAGTTCACAGTTGAAAGAACCATTTGCCAGAAGATGTCCAGGCTCTCGTaGCCTGTGGTCAGTGGGAGA +
Preference number: 5 (lower is better)
Translates to: IYRYVHDKFTVERTICQKMSRLS*PVVSGR
Trigger: TCTCCCACTGACCACAGGCAACGAGAGCCTGGACAT...CTTCTGGCAAATGGTTCTTTCAACTGTGAACTTATCGTGTACATATCTGTATAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CAA 90 bp GATATGTACACGATAAGTTCACAGTTGAAAGAACCATTTGCCAGAAGCCTGGCAGCCTCACTAACTTCGTaGTCCTCTCTGGTTAATAGC +
Preference number: 5 (lower is better)
Translates to: DMYTISSQLKEPFARSLAASLTS*SSLVNS
Trigger: GCTATTAACCAGAGAGGACAACGAAGTTAGTGAGGC...TGCCAGGCTTCTGGCAAATGGTTCTTTCAACTGTGAACTTATCGTGTACATATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CAA 90 bp CTCCACTCCTACTCCATTAGGATTTCTCTGACTTCTAGGTTCCTCCACCTCAAAGCTGGAGGTTTGTCTTaGTTAGTGCTTCACAGTAAT +
Preference number: 5 (lower is better)
Translates to: LHSYSIRISLTSRFLHLKAGGLS*LVLHSN
Trigger: ATTACTGTGAAGCACTAACAAAGACAAACCTCCAGC...TTTGAGGTGGAGGAACCTAGAAGTCAGAGAAATCCTAATGGAGTAGGAGTGGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CAA 90 bp ATATACAGATATGTACACGATAAGTTCACAGTTGAAAGAACCATTTGCCAGAAGGCTATGTTGCCCAGGTaGGTCTTGAACCTCCTGGGC +
Preference number: 5 (lower is better)
Translates to: IYRYVHDKFTVERTICQKAMLPR*VLNLLG
Trigger: GCCCAGGAGGTTCAAGACCAACCTGGGCAACATAGC...CTTCTGGCAAATGGTTCTTTCAACTGTGAACTTATCGTGTACATATCTGTATAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CAA 90 bp TGGATAAAATGGCACAATATCTGGGACTGGTTGCAGAAGAATCCAGAGGGAAGTGCAGAGTGTCGACAATaGCCCTTTAAAGACTCAAAG +
Preference number: 5 (lower is better)
Translates to: WIKWHNIWDWLQKNPEGSAECRQ*PFKDSK
Trigger: CTTTGAGTCTTTAAAGGGCAATTGTCGACACTCTGC...ACTTCCCTCTGGATTCTTCTGCAACCAGTCCCAGATATTGTGCCATTTTATCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378023.8
ENST00000540914.5
CDS-3UTR CAA 90 bp AAAATGGCACAATATCTGGGACTGGTTGCAGAAGAATCCAGAGGGAAGTCAGCAAGGGAAGTCAGCAGGTaGAAGAATAGGAAACAAGAT +
Preference number: 5 (lower is better)
Translates to: KMAQYLGLVAEESRGKSAREVSR*KNRKQD
Trigger: ATCTTGTTTCCTATTCTTCAACCTGCTGACTTCCCT...TGCTGACTTCCCTCTGGATTCTTCTGCAACCAGTCCCAGATATTGTGCCATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR CAA 90 bp GTACAACCATGGATAAAATGGCACAATATCTGGGACTGGTTGCAGAAGAATCCAAATATCTGGGACTGGTaGCAGAAGAATCCAGAGGGA +
Preference number: 5 (lower is better)
Translates to: VQPWIKWHNIWDWLQKNPNIWDW*QKNPEG
Trigger: TCCCTCTGGATTCTTCTGCAACCAGTCCCAGATATT...TGGATTCTTCTGCAACCAGTCCCAGATATTGTGCCATTTTATCCATGGTTGTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
CDS-3UTR CAA 90 bp GAGCATTCTATAATGCTGGCCACATGCAGAAACATTACAAGCAAAACAATGCCAGCAAAACAATGCCAGTaGCTATGGGCACAGAGTTGG +
Preference number: 5 (lower is better)
Translates to: EHSIMLATCRNITSKTMPAKQCQ*LWAQSW
Trigger: CCAACTCTGTGCCCATAGCAACTGGCATTGTTTTGC...TGGCATTGTTTTGCTTGTAATGTTTCTGCATGTGGCCAGCATTATAGAATGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS CCA 90 bp TTTCCTATGTTCTCATCACTGACAGCTGCGAGTTTCTCCATCACTTaGATCTGCCTAGAAAGCTTCTCTAAGAGACTTCTTGCCACAAAT +
Preference number: 5 (lower is better)
Translates to: FPMFSSLTAASFSIT*ICLESFSKRLLATN
Trigger: ATTTGTGGCAAGAAGTCTCTTAGAGAAGCTTTCTAGGCAGATCCAAGTGATGGAGAAACTCGCAGCTGTCAGTGATGAGAACATAGGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259698.9
ENST00000463828.1
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CAA 90 bp ATTACACTCACATATATTGTTTTGATACCTTGGCATACCCCACCTTGTACACTCTCCTTGAAGCTCCGATaGATCTCTGTCAGACTCTCC +
Preference number: 5 (lower is better)
Translates to: ITLTYIVLIPWHTPPCTLSLKLR*ISVRLS
Trigger: GGAGAGTCTGACAGAGATCAATCGGAGCTTCAAGGA...GAGTGTACAAGGTGGGGTATGCCAAGGTATCAAAACAATATATGTGAGTGTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CAA 90 bp CATTTTTATTTCAGTTGTCGTGTCTCTCAGGCTCTAAACAATTTCCAGCCCAAATCCTTGAAGCTCCGATaGATCTCTGTCAGACTCTCC +
Preference number: 5 (lower is better)
Translates to: HFYFSCRVSQALNNFQPKSLKLR*ISVRLS
Trigger: GGAGAGTCTGACAGAGATCAATCGGAGCTTCAAGGA...TTTGGGCTGGAAATTGTTTAGAGCCTGAGAGACACGACAACTGAAATAAAAATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CAA 90 bp ATAAAATGGCACAATATCTGGGACTGGTTGCAGAAGAATCCAGAGGGAAGTCAGCCATTTACTTCTATTTaGCCTTTCAGTTTCCACCGC +
Preference number: 5 (lower is better)
Translates to: IKWHNIWDWLQKNPEGSQPFTSI*PFSFHR
Trigger: GCGGTGGAAACTGAAAGGCAAAATAGAAGTAAATGG...CTGACTTCCCTCTGGATTCTTCTGCAACCAGTCCCAGATATTGTGCCATTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR CAA 90 bp TCTGGCCTGGAGCATTCTATAATGCTGGCCACATGCAGAAACATTACAAGCAAACCATTTACTTCTATTTaGCCTTTCAGTTTCCACCGC +
Preference number: 5 (lower is better)
Translates to: SGLEHSIMLATCRNITSKPFTSI*PFSFHR
Trigger: GCGGTGGAAACTGAAAGGCAAAATAGAAGTAAATGG...TTTGCTTGTAATGTTTCTGCATGTGGCCAGCATTATAGAATGCTCCAGGCCAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR CAA 90 bp TTTCAACCATTTAACATAAGCTATAGGCTATACCTCCTAACTACAGACTGTACACCTTCAGGTGTGACTTaGGCTCTTGGCCTTCTCCCA +
Preference number: 5 (lower is better)
Translates to: FQPFNISYRLYLLTTDCTPSGVT*ALGLLP
Trigger: TGGGAGAAGGCCAAGAGCCAAAGTCACACCTGAAGG...TGTACAGTCTGTAGTTAGGAGGTATAGCCTATAGCTTATGTTAAATGGTTGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CAA 90 bp CTCCACTCCTACTCCATTAGGATTTCTCTGACTTCTAGGTTCCTCCACCTCAAACAAATTCATGACTTCTaGGTTCAGATCCTGAAACTC +
Preference number: 5 (lower is better)
Translates to: LHSYSIRISLTSRFLHLKQIHDF*VQILKL
Trigger: GAGTTTCAGGATCTGAACCAAGAAGTCATGAATTTG...TTTGAGGTGGAGGAACCTAGAAGTCAGAGAAATCCTAATGGAGTAGGAGTGGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CAA 90 bp GATATGTACACGATAAGTTCACAGTTGAAAGAACCATTTGCCAGAAGCCTGGCACGGCTTACTGCTGGCTaGCATTTTAGAATATCATCC +
Preference number: 5 (lower is better)
Translates to: DMYTISSQLKEPFARSLARLTAG*HFRISS
Trigger: GGATGATATTCTAAAATGCAAGCCAGCAGTAAGCCG...TGCCAGGCTTCTGGCAAATGGTTCTTTCAACTGTGAACTTATCGTGTACATATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CAA 90 bp GATATGTACACGATAAGTTCACAGTTGAAAGAACCATTTGCCAGAAGCCTGGCACCTGGATATTCTTTGTaGACAGTTCTGGCAAAGCTG +
Preference number: 5 (lower is better)
Translates to: DMYTISSQLKEPFARSLAPGYSL*TVLAKL
Trigger: CAGCTTTGCCAGAACTGTCAACAAAGAATATCCAGG...TGCCAGGCTTCTGGCAAATGGTTCTTTCAACTGTGAACTTATCGTGTACATATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CAA 90 bp GATAAGTTCACAGTTGAAAGAACCATTTGCCAGAAGCCTGGCAAACAATTTGCAGCCTCACTAACTTCGTaGTCCTCTCTGGTTAATAGC +
Preference number: 5 (lower is better)
Translates to: DKFTVERTICQKPGKQFAASLTS*SSLVNS
Trigger: GCTATTAACCAGAGAGGACAACGAAGTTAGTGAGGC...TGCAAATTGTTTGCCAGGCTTCTGGCAAATGGTTCTTTCAACTGTGAACTTATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CAA 90 bp GATAAGTTCACAGTTGAAAGAACCATTTGCCAGAAGCCTGGCAAACAATTTGCAAGGAAATTTGTCCAATaGTTCATATGCCAGCCGCCC +
Preference number: 5 (lower is better)
Translates to: DKFTVERTICQKPGKQFARKFVQ*FICQPP
Trigger: GGGCGGCTGGCATATGAACAATTGGACAAATTTCCT...TGCAAATTGTTTGCCAGGCTTCTGGCAAATGGTTCTTTCAACTGTGAACTTATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CAA 90 bp TTTCAACCATTTAACATAAGCTATAGGCTATACCTCCTAACTACAGACTGTACATTGCCCAGGTTGGTCTaGAACCTCCTGGGCTTAAGC +
Preference number: 5 (lower is better)
Translates to: FQPFNISYRLYLLTTDCTLPRLV*NLLGLS
Trigger: GCTTAAGCCCAGGAGGTTCAAGACCAACCTGGGCAA...TGTACAGTCTGTAGTTAGGAGGTATAGCCTATAGCTTATGTTAAATGGTTGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CAA 90 bp CTCCACTCCTACTCCATTAGGATTTCTCTGACTTCTAGGTTCCTCCACCTCAAACTCACATATATTGTTTaGATACCTTGGCATACCCCA +
Preference number: 5 (lower is better)
Translates to: LHSYSIRISLTSRFLHLKLTYIV*IPWHTP
Trigger: TGGGGTATGCCAAGGTATCAAAACAATATATGTGAG...TTTGAGGTGGAGGAACCTAGAAGTCAGAGAAATCCTAATGGAGTAGGAGTGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CAA 90 bp CTCCACTCCTACTCCATTAGGATTTCTCTGACTTCTAGGTTCCTCCACCTCAAAACGATAAGTTCACAGTaGAAAGAACCATTTGCCAGA +
Preference number: 5 (lower is better)
Translates to: LHSYSIRISLTSRFLHLKTISSQ*KEPFAR
Trigger: TCTGGCAAATGGTTCTTTCAACTGTGAACTTATCGT...TTTGAGGTGGAGGAACCTAGAAGTCAGAGAAATCCTAATGGAGTAGGAGTGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CAA 90 bp GATAAAATGGCACAATATCTGGGACTGGTTGCAGAAGAATCCAGAGGGAAGTCAAGGGAAGTCAGCAGGTaGAAGAATAGGAAACAAGAT +
Preference number: 5 (lower is better)
Translates to: DKMAQYLGLVAEESRGKSREVSR*KNRKQD
Trigger: ATCTTGTTTCCTATTCTTCAACCTGCTGACTTCCCT...TGACTTCCCTCTGGATTCTTCTGCAACCAGTCCCAGATATTGTGCCATTTTATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR CAA 90 bp GAGCATTCTATAATGCTGGCCACATGCAGAAACATTACAAGCAAAACAATGCCAGAAAGAATGAATGCCTaGGGCATGACAAGAAGCAGC +
Preference number: 5 (lower is better)
Translates to: EHSIMLATCRNITSKTMPERMNA*GMTRSS
Trigger: GCTGCTTCTTGTCATGCCCAAGGCATTCATTCTTTC...TGGCATTGTTTTGCTTGTAATGTTTCTGCATGTGGCCAGCATTATAGAATGCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000645100.1
ENST00000647136.1
CDS TCA 90 bp TCACCCTCAGTGATCTCCGTCCAAGAGGCAGCACCATTTAGTTTCTaGTCGTCAAGGTGTTTAGCATCTTTTAGAATATCATCCAAATTC +
Preference number: 5 (lower is better)
Translates to: SPSVISVQEAAPFSF*SSRCLASFRISSKF
Trigger: GAATTTGGATGATATTCTAAAAGATGCTAAACACCTTGACGATCAGAAACTAAATGGTGCTGCCTCTTGGACGGAGATCACTGAGGGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000473070.1
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS TCA 90 bp TTATACTTGGTCCTCTTTAATTATACAGAGTTGCCCCCAGAGTACTaGAATGATAGACTAGAACACGATGACTTCAGCAGGGGATCAGAG +
Preference number: 5 (lower is better)
Translates to: LYLVLFNYTELPPEY*NDRLEHDDFSRGSE
Trigger: CTCTGATCCCCTGCTGAAGTCATCGTGTTCTAGTCTATCATTTCAGTACTCTGGGGGCAACTCTGTATAATTAAAGAGGACCAAGTATAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000606385.1
CDS-3UTR CAA 90 bp TTTCAACCATTTAACATAAGCTATAGGCTATACCTCCTAACTACAGACTGTACAGGATGTTGCGAAGGCTaGCTTCATTTTGCTGGCACC +
Preference number: 5 (lower is better)
Translates to: FQPFNISYRLYLLTTDCTGCCEG*LHFAGT
Trigger: GGTGCCAGCAAAATGAAGCAAGCCTTCGCAACATCC...TGTACAGTCTGTAGTTAGGAGGTATAGCCTATAGCTTATGTTAAATGGTTGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CAA 90 bp TTTCAACCATTTAACATAAGCTATAGGCTATACCTCCTAACTACAGACTGTACATGCTGGCAGGGGATGTaGCGAAGGCTTGCTTCATTT +
Preference number: 5 (lower is better)
Translates to: FQPFNISYRLYLLTTDCTCWQGM*RRLASF
Trigger: AAATGAAGCAAGCCTTCGCAACATCCCCTGCCAGCA...TGTACAGTCTGTAGTTAGGAGGTATAGCCTATAGCTTATGTTAAATGGTTGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CAA 90 bp GCATTCTATAATGCTGGCCACATGCAGAAACATTACAAGCAAAACAATGCCAGTTTCTCTGTGTACTCCTaGAAGCTCCGATTGATCTCT +
Preference number: 5 (lower is better)
Translates to: AFYNAGHMQKHYKQNNASFSVYS*KLRLIS
Trigger: AGAGATCAATCGGAGCTTCAAGGAGTACACAGAGAA...ACTGGCATTGTTTTGCTTGTAATGTTTCTGCATGTGGCCAGCATTATAGAATGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS-3UTR CAA 90 bp ATATACAGATATGTACACGATAAGTTCACAGTTGAAAGAACCATTTGCCAGAAGGCTGCAAACAGCTCTTaGGTCTCACAGGTCACGCTA +
Preference number: 5 (lower is better)
Translates to: IYRYVHDKFTVERTICQKAANSS*VSQVTL
Trigger: TAGCGTGACCTGTGAGACCAAAGAGCTGTTTGCAGC...CTTCTGGCAAATGGTTCTTTCAACTGTGAACTTATCGTGTACATATCTGTATAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CAA 90 bp GCATTCTATAATGCTGGCCACATGCAGAAACATTACAAGCAAAACAATGCCAGTTGTCATCAGGTAGATTaGAATAGAGCTCTAGCACGG +
Preference number: 5 (lower is better)
Translates to: AFYNAGHMQKHYKQNNASCHQVD*NRALAR
Trigger: CCGTGCTAGAGCTCTATTCAAATCTACCTGATGACA...ACTGGCATTGTTTTGCTTGTAATGTTTCTGCATGTGGCCAGCATTATAGAATGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644411.1
CDS-3UTR CAA 90 bp TGGATAAAATGGCACAATATCTGGGACTGGTTGCAGAAGAATCCAGAGGGAAGTCAAATTCATGACTTCTaGGTTCAGATCCTGAAACTC +
Preference number: 5 (lower is better)
Translates to: WIKWHNIWDWLQKNPEGSQIHDF*VQILKL
Trigger: GAGTTTCAGGATCTGAACCAAGAAGTCATGAATTTG...ACTTCCCTCTGGATTCTTCTGCAACCAGTCCCAGATATTGTGCCATTTTATCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
ENST00000644621.1
CDS-3UTR CAA 90 bp ATATACAGATATGTACACGATAAGTTCACAGTTGAAAGAACCATTTGCCAGAAGAATTTGCTGCACGAGTaGGGTGCAGTACTGGAGGTG +
Preference number: 5 (lower is better)
Translates to: IYRYVHDKFTVERTICQKNLLHE*GAVLEV
Trigger: CACCTCCAGTACTGCACCCAACTCGTGCAGCAAATT...CTTCTGGCAAATGGTTCTTTCAACTGTGAACTTATCGTGTACATATCTGTATAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CAA 90 bp TTTCAACCATTTAACATAAGCTATAGGCTATACCTCCTAACTACAGACTGTACAAATTTGCTGCACGAGTaGGGTGCAGTACTGGAGGTG +
Preference number: 5 (lower is better)
Translates to: FQPFNISYRLYLLTTDCTNLLHE*GAVLEV
Trigger: CACCTCCAGTACTGCACCCAACTCGTGCAGCAAATT...TGTACAGTCTGTAGTTAGGAGGTATAGCCTATAGCTTATGTTAAATGGTTGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CAA 90 bp GATAAGTTCACAGTTGAAAGAACCATTTGCCAGAAGCCTGGCAAACAATTTGCATCTCTAAGAGACTTCTaGCCACAAATGGGGTTTTGC +
Preference number: 5 (lower is better)
Translates to: DKFTVERTICQKPGKQFASLRDF*PQMGFC
Trigger: GCAAAACCCCATTTGTGGCAAGAAGTCTCTTAGAGA...TGCAAATTGTTTGCCAGGCTTCTGGCAAATGGTTCTTTCAACTGTGAACTTATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CAA 90 bp ATTACACTCACATATATTGTTTTGATACCTTGGCATACCCCACCTTGTACACTCGCCTCACTAACTTCGTaGTCCTCTCTGGTTAATAGC +
Preference number: 5 (lower is better)
Translates to: ITLTYIVLIPWHTPPCTLASLTS*SSLVNS
Trigger: GCTATTAACCAGAGAGGACAACGAAGTTAGTGAGGC...GAGTGTACAAGGTGGGGTATGCCAAGGTATCAAAACAATATATGTGAGTGTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CAA 90 bp CATTTTTATTTCAGTTGTCGTGTCTCTCAGGCTCTAAACAATTTCCAGCCCAAAAGGAAATTTGTCCAATaGTTCATATGCCAGCCGCCC +
Preference number: 5 (lower is better)
Translates to: HFYFSCRVSQALNNFQPKRKFVQ*FICQPP
Trigger: GGGCGGCTGGCATATGAACAATTGGACAAATTTCCT...TTTGGGCTGGAAATTGTTTAGAGCCTGAGAGACACGACAACTGAAATAAAAATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CAA 90 bp GATATGTACACGATAAGTTCACAGTTGAAAGAACCATTTGCCAGAAGCCTGGCACAGTCTCGAGGAAATTaGTCCAATTGTTCATATGCC +
Preference number: 5 (lower is better)
Translates to: DMYTISSQLKEPFARSLAQSRGN*SNCSYA
Trigger: GGCATATGAACAATTGGACAAATTTCCTCGAGACTG...TGCCAGGCTTCTGGCAAATGGTTCTTTCAACTGTGAACTTATCGTGTACATATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CAA 90 bp CTCCACTCCTACTCCATTAGGATTTCTCTGACTTCTAGGTTCCTCCACCTCAAAGAATGGTCTTGTACTTaGCTTAATGAACTTGCATCT +
Preference number: 5 (lower is better)
Translates to: LHSYSIRISLTSRFLHLKEWSCT*LNELAS
Trigger: AGATGCAAGTTCATTAAGCAAAGTACAAGACCATTC...TTTGAGGTGGAGGAACCTAGAAGTCAGAGAAATCCTAATGGAGTAGGAGTGGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CAA 90 bp GAGCATTCTATAATGCTGGCCACATGCAGAAACATTACAAGCAAAACAATGCCAGCAGAGTGTCGACAATaGCCCTTTAAAGACTCAAAG +
Preference number: 5 (lower is better)
Translates to: EHSIMLATCRNITSKTMPAECRQ*PFKDSK
Trigger: CTTTGAGTCTTTAAAGGGCAATTGTCGACACTCTGC...TGGCATTGTTTTGCTTGTAATGTTTCTGCATGTGGCCAGCATTATAGAATGCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540914.5
CDS-3UTR CAA 90 bp ATATTCAAGAGGATGCTGGGGTGGGTCGAATGGGACAAATTCTGCAAGTTAGAATGTCATCAGGTAGATTaGAAAAGAAGGAGTGGTCTT +
Preference number: 5 (lower is better)
Translates to: IFKRMLGWVEWDKFCKLECHQVD*KRRSGL
Trigger: AAGACCACTCCTTCTTTTCAAATCTACCTGATGACA...TTCTAACTTGCAGAATTTGTCCCATTCGACCCACCCCAGCATCCTCTTGAATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000510784.8
ENST00000540914.5
ENST00000645100.1
ENST00000647136.1
CDS-3UTR CAA 90 bp GTACAACCATGGATAAAATGGCACAATATCTGGGACTGGTTGCAGAAGAATCCAAGGGAAGTCAGCAGGTaGAAGAATAGGAAACAAGAT +
Preference number: 5 (lower is better)
Translates to: VQPWIKWHNIWDWLQKNPREVSR*KNRKQD
Trigger: ATCTTGTTTCCTATTCTTCAACCTGCTGACTTCCCT...TGGATTCTTCTGCAACCAGTCCCAGATATTGTGCCATTTTATCCATGGTTGTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
CDS TCA 90 bp AAGAGGGTTTCTGAGGCCACATTTCTGATTTCTTCAGTATCAGATTaGCACAATGTCACCAGCATTTTAATGCTTTCAGTAGCCTCAAGG +
Preference number: 5 (lower is better)
Translates to: KRVSEATFLISSVSD*HNVTSILMLSVASR
Trigger: CCTTGAGGCTACTGAAAGCATTAAAATGCTGGTGACATTGTGTCAATCTGATACTGAAGAAATCAGAAATGTGGCCTCAGAAACCCTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CAA 90 bp ATATACAGATATGTACACGATAAGTTCACAGTTGAAAGAACCATTTGCCAGAAGCTTCTAATGATCCCATaGGGCCCTCCAGGCGAAAAA +
Preference number: 5 (lower is better)
Translates to: IYRYVHDKFTVERTICQKLLMIP*GPPGEK
Trigger: TTTTTCGCCTGGAGGGCCCAATGGGATCATTAGAAG...CTTCTGGCAAATGGTTCTTTCAACTGTGAACTTATCGTGTACATATCTGTATAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CAA 90 bp TTTCAACCATTTAACATAAGCTATAGGCTATACCTCCTAACTACAGACTGTACATCCTTGAAGCTCCGATaGATCTCTGTCAGACTCTCC +
Preference number: 5 (lower is better)
Translates to: FQPFNISYRLYLLTTDCTSLKLR*ISVRLS
Trigger: GGAGAGTCTGACAGAGATCAATCGGAGCTTCAAGGA...TGTACAGTCTGTAGTTAGGAGGTATAGCCTATAGCTTATGTTAAATGGTTGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CAA 90 bp ATTACACTCACATATATTGTTTTGATACCTTGGCATACCCCACCTTGTACACTCTTCTCTGTGTACTCCTaGAAGCTCCGATTGATCTCT +
Preference number: 5 (lower is better)
Translates to: ITLTYIVLIPWHTPPCTLFSVYS*KLRLIS
Trigger: AGAGATCAATCGGAGCTTCAAGGAGTACACAGAGAA...GAGTGTACAAGGTGGGGTATGCCAAGGTATCAAAACAATATATGTGAGTGTAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CAA 90 bp CATTTTTATTTCAGTTGTCGTGTCTCTCAGGCTCTAAACAATTTCCAGCCCAAATTCTCTGTGTACTCCTaGAAGCTCCGATTGATCTCT +
Preference number: 5 (lower is better)
Translates to: HFYFSCRVSQALNNFQPKFSVYS*KLRLIS
Trigger: AGAGATCAATCGGAGCTTCAAGGAGTACACAGAGAA...TTTGGGCTGGAAATTGTTTAGAGCCTGAGAGACACGACAACTGAAATAAAAATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CAA 90 bp ATATACAGATATGTACACGATAAGTTCACAGTTGAAAGAACCATTTGCCAGAAGGCCAGACCTTTCATCTaGATGGAGAATTCTCCCAGC +
Preference number: 5 (lower is better)
Translates to: IYRYVHDKFTVERTICQKARPFI*MENSPS
Trigger: GCTGGGAGAATTCTCCATCAAGATGAAAGGTCTGGC...CTTCTGGCAAATGGTTCTTTCAACTGTGAACTTATCGTGTACATATCTGTATAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CAA 90 bp GATAAGTTCACAGTTGAAAGAACCATTTGCCAGAAGCCTGGCAAACAATTTGCACCATTTACTTCTATTTaGCCTTTCAGTTTCCACCGC +
Preference number: 5 (lower is better)
Translates to: DKFTVERTICQKPGKQFAPFTSI*PFSFHR
Trigger: GCGGTGGAAACTGAAAGGCAAAATAGAAGTAAATGG...TGCAAATTGTTTGCCAGGCTTCTGGCAAATGGTTCTTTCAACTGTGAACTTATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CAA 90 bp CATTTTTATTTCAGTTGTCGTGTCTCTCAGGCTCTAAACAATTTCCAGCCCAAACCATCCCAGCTCTGCTaGCCATTTACTTCTATTTTG +
Preference number: 5 (lower is better)
Translates to: HFYFSCRVSQALNNFQPKPSQLC*PFTSIL
Trigger: CAAAATAGAAGTAAATGGCAAGCAGAGCTGGGATGG...TTTGGGCTGGAAATTGTTTAGAGCCTGAGAGACACGACAACTGAAATAAAAATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CAA 90 bp TTTCAACCATTTAACATAAGCTATAGGCTATACCTCCTAACTACAGACTGTACATTGAGCTCCGTGACCTaGATGGAGATGAACCCAACT +
Preference number: 5 (lower is better)
Translates to: FQPFNISYRLYLLTTDCTLSSVT*MEMNPT
Trigger: AGTTGGGTTCATCTCCATCAAGGTCACGGAGCTCAA...TGTACAGTCTGTAGTTAGGAGGTATAGCCTATAGCTTATGTTAAATGGTTGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CAA 90 bp CATTTTTATTTCAGTTGTCGTGTCTCTCAGGCTCTAAACAATTTCCAGCCCAAATGTCATCAGGTAGATTaGAATAGAGCTCTAGCACGG +
Preference number: 5 (lower is better)
Translates to: HFYFSCRVSQALNNFQPKCHQVD*NRALAR
Trigger: CCGTGCTAGAGCTCTATTCAAATCTACCTGATGACA...TTTGGGCTGGAAATTGTTTAGAGCCTGAGAGACACGACAACTGAAATAAAAATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000259698.9
ENST00000613507.4
CDS-3UTR CAA 90 bp GATATGTACACGATAAGTTCACAGTTGAAAGAACCATTTGCCAGAAGCCTGGCACAAATTCATGACTTCTaGGTTCAGATCCTGAAACTC +
Preference number: 5 (lower is better)
Translates to: DMYTISSQLKEPFARSLAQIHDF*VQILKL
Trigger: GAGTTTCAGGATCTGAACCAAGAAGTCATGAATTTG...TGCCAGGCTTCTGGCAAATGGTTCTTTCAACTGTGAACTTATCGTGTACATATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CAA 90 bp ATTACACTCACATATATTGTTTTGATACCTTGGCATACCCCACCTTGTACACTCCGGCTTACTGCTGGCTaGCATTTTAGAATATCATCC +
Preference number: 5 (lower is better)
Translates to: ITLTYIVLIPWHTPPCTLRLTAG*HFRISS
Trigger: GGATGATATTCTAAAATGCAAGCCAGCAGTAAGCCG...GAGTGTACAAGGTGGGGTATGCCAAGGTATCAAAACAATATATGTGAGTGTAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CAA 90 bp CATTTTTATTTCAGTTGTCGTGTCTCTCAGGCTCTAAACAATTTCCAGCCCAAAGAGTTTCTCCATCACTaGGATCTGCCTAGAAAGCTT +
Preference number: 5 (lower is better)
Translates to: HFYFSCRVSQALNNFQPKEFLHH*DLPRKL
Trigger: AAGCTTTCTAGGCAGATCCAAGTGATGGAGAAACTC...TTTGGGCTGGAAATTGTTTAGAGCCTGAGAGACACGACAACTGAAATAAAAATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CAA 90 bp ATTACACTCACATATATTGTTTTGATACCTTGGCATACCCCACCTTGTACACTCGAGTTTCTCCATCACTaGGATCTGCCTAGAAAGCTT +
Preference number: 5 (lower is better)
Translates to: ITLTYIVLIPWHTPPCTLEFLHH*DLPRKL
Trigger: AAGCTTTCTAGGCAGATCCAAGTGATGGAGAAACTC...GAGTGTACAAGGTGGGGTATGCCAAGGTATCAAAACAATATATGTGAGTGTAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CAA 90 bp GATATGTACACGATAAGTTCACAGTTGAAAGAACCATTTGCCAGAAGCCTGGCAACATTTTTATTTCAGTaGTCGTGTCTCTCAGGCTCT +
Preference number: 5 (lower is better)
Translates to: DMYTISSQLKEPFARSLATFLFQ*SCLSGS
Trigger: AGAGCCTGAGAGACACGACAACTGAAATAAAAATGT...TGCCAGGCTTCTGGCAAATGGTTCTTTCAACTGTGAACTTATCGTGTACATATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CAA 90 bp GTACAACCATGGATAAAATGGCACAATATCTGGGACTGGTTGCAGAAGAATCCATGTCATCAGGTAGATTaGAAAAGAAGGAGTGGTCTT +
Preference number: 5 (lower is better)
Translates to: VQPWIKWHNIWDWLQKNPCHQVD*KRRSGL
Trigger: AAGACCACTCCTTCTTTTCAAATCTACCTGATGACA...TGGATTCTTCTGCAACCAGTCCCAGATATTGTGCCATTTTATCCATGGTTGTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000540914.5
ENST00000643623.1
CDS-3UTR CAA 90 bp CATTTTTATTTCAGTTGTCGTGTCTCTCAGGCTCTAAACAATTTCCAGCCCAAAGCTGGAGGTTTGTCTTaGTTAGTGCTTCACAGTAAT +
Preference number: 5 (lower is better)
Translates to: HFYFSCRVSQALNNFQPKAGGLS*LVLHSN
Trigger: ATTACTGTGAAGCACTAACAAAGACAAACCTCCAGC...TTTGGGCTGGAAATTGTTTAGAGCCTGAGAGACACGACAACTGAAATAAAAATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CAA 90 bp GATAAGTTCACAGTTGAAAGAACCATTTGCCAGAAGCCTGGCAAACAATTTGCATTCTTCAGTATCAGATaGACACAATGTCACCAGCAT +
Preference number: 5 (lower is better)
Translates to: DKFTVERTICQKPGKQFAFFSIR*TQCHQH
Trigger: ATGCTGGTGACATTGTGTCAATCTGATACTGAAGAA...TGCAAATTGTTTGCCAGGCTTCTGGCAAATGGTTCTTTCAACTGTGAACTTATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CAA 90 bp ATATACAGATATGTACACGATAAGTTCACAGTTGAAAGAACCATTTGCCAGAAGAGGAAATTTGTCCAATaGTTCATATGCCAGCCGCCC +
Preference number: 5 (lower is better)
Translates to: IYRYVHDKFTVERTICQKRKFVQ*FICQPP
Trigger: GGGCGGCTGGCATATGAACAATTGGACAAATTTCCT...CTTCTGGCAAATGGTTCTTTCAACTGTGAACTTATCGTGTACATATCTGTATAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CAA 90 bp CATTTTTATTTCAGTTGTCGTGTCTCTCAGGCTCTAAACAATTTCCAGCCCAAATATTGTTTTGATACCTaGGCATACCCCACCTTGTAC +
Preference number: 5 (lower is better)
Translates to: HFYFSCRVSQALNNFQPKYCFDT*AYPTLY
Trigger: GTACAAGGTGGGGTATGCCAAGGTATCAAAACAATA...TTTGGGCTGGAAATTGTTTAGAGCCTGAGAGACACGACAACTGAAATAAAAATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CAA 90 bp GATAAGTTCACAGTTGAAAGAACCATTTGCCAGAAGCCTGGCAAACAATTTGCAACGATAAGTTCACAGTaGAAAGAACCATTTGCCAGA +
Preference number: 5 (lower is better)
Translates to: DKFTVERTICQKPGKQFATISSQ*KEPFAR
Trigger: TCTGGCAAATGGTTCTTTCAACTGTGAACTTATCGT...TGCAAATTGTTTGCCAGGCTTCTGGCAAATGGTTCTTTCAACTGTGAACTTATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CAA 90 bp TTTCAACCATTTAACATAAGCTATAGGCTATACCTCCTAACTACAGACTGTACATTCTCTGTGTACTCCTaGAAGCTCCGATTGATCTCT +
Preference number: 5 (lower is better)
Translates to: FQPFNISYRLYLLTTDCTFSVYS*KLRLIS
Trigger: AGAGATCAATCGGAGCTTCAAGGAGTACACAGAGAA...TGTACAGTCTGTAGTTAGGAGGTATAGCCTATAGCTTATGTTAAATGGTTGAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CAA 90 bp TTTCAACCATTTAACATAAGCTATAGGCTATACCTCCTAACTACAGACTGTACACCATCCCAGCTCTGCTaGCCATTTACTTCTATTTTG +
Preference number: 5 (lower is better)
Translates to: FQPFNISYRLYLLTTDCTPSQLC*PFTSIL
Trigger: CAAAATAGAAGTAAATGGCAAGCAGAGCTGGGATGG...TGTACAGTCTGTAGTTAGGAGGTATAGCCTATAGCTTATGTTAAATGGTTGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CAA 90 bp TTTCAACCATTTAACATAAGCTATAGGCTATACCTCCTAACTACAGACTGTACATGTCATCAGGTAGATTaGAATAGAGCTCTAGCACGG +
Preference number: 5 (lower is better)
Translates to: FQPFNISYRLYLLTTDCTCHQVD*NRALAR
Trigger: CCGTGCTAGAGCTCTATTCAAATCTACCTGATGACA...TGTACAGTCTGTAGTTAGGAGGTATAGCCTATAGCTTATGTTAAATGGTTGAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259698.9
ENST00000613507.4
CDS-3UTR CAA 90 bp TTTCAACCATTTAACATAAGCTATAGGCTATACCTCCTAACTACAGACTGTACACGGCTTACTGCTGGCTaGCATTTTAGAATATCATCC +
Preference number: 5 (lower is better)
Translates to: FQPFNISYRLYLLTTDCTRLTAG*HFRISS
Trigger: GGATGATATTCTAAAATGCAAGCCAGCAGTAAGCCG...TGTACAGTCTGTAGTTAGGAGGTATAGCCTATAGCTTATGTTAAATGGTTGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CAA 90 bp TTTCAACCATTTAACATAAGCTATAGGCTATACCTCCTAACTACAGACTGTACATCTCTAAGAGACTTCTaGCCACAAATGGGGTTTTGC +
Preference number: 5 (lower is better)
Translates to: FQPFNISYRLYLLTTDCTSLRDF*PQMGFC
Trigger: GCAAAACCCCATTTGTGGCAAGAAGTCTCTTAGAGA...TGTACAGTCTGTAGTTAGGAGGTATAGCCTATAGCTTATGTTAAATGGTTGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CAA 90 bp ATATACAGATATGTACACGATAAGTTCACAGTTGAAAGAACCATTTGCCAGAAGTCTCTAAGAGACTTCTaGCCACAAATGGGGTTTTGC +
Preference number: 5 (lower is better)
Translates to: IYRYVHDKFTVERTICQKSLRDF*PQMGFC
Trigger: GCAAAACCCCATTTGTGGCAAGAAGTCTCTTAGAGA...CTTCTGGCAAATGGTTCTTTCAACTGTGAACTTATCGTGTACATATCTGTATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CAA 90 bp ATATACAGATATGTACACGATAAGTTCACAGTTGAAAGAACCATTTGCCAGAAGGAGTTTCTCCATCACTaGGATCTGCCTAGAAAGCTT +
Preference number: 5 (lower is better)
Translates to: IYRYVHDKFTVERTICQKEFLHH*DLPRKL
Trigger: AAGCTTTCTAGGCAGATCCAAGTGATGGAGAAACTC...CTTCTGGCAAATGGTTCTTTCAACTGTGAACTTATCGTGTACATATCTGTATAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CAA 90 bp ATATACAGATATGTACACGATAAGTTCACAGTTGAAAGAACCATTTGCCAGAAGCCTGGATATTCTTTGTaGACAGTTCTGGCAAAGCTG +
Preference number: 5 (lower is better)
Translates to: IYRYVHDKFTVERTICQKPGYSL*TVLAKL
Trigger: CAGCTTTGCCAGAACTGTCAACAAAGAATATCCAGG...CTTCTGGCAAATGGTTCTTTCAACTGTGAACTTATCGTGTACATATCTGTATAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CAA 90 bp TTTCAACCATTTAACATAAGCTATAGGCTATACCTCCTAACTACAGACTGTACACCTGGATATTCTTTGTaGACAGTTCTGGCAAAGCTG +
Preference number: 5 (lower is better)
Translates to: FQPFNISYRLYLLTTDCTPGYSL*TVLAKL
Trigger: CAGCTTTGCCAGAACTGTCAACAAAGAATATCCAGG...TGTACAGTCTGTAGTTAGGAGGTATAGCCTATAGCTTATGTTAAATGGTTGAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CAA 90 bp CATTTTTATTTCAGTTGTCGTGTCTCTCAGGCTCTAAACAATTTCCAGCCCAAATTCTTCAGTATCAGATaGACACAATGTCACCAGCAT +
Preference number: 5 (lower is better)
Translates to: HFYFSCRVSQALNNFQPKFFSIR*TQCHQH
Trigger: ATGCTGGTGACATTGTGTCAATCTGATACTGAAGAA...TTTGGGCTGGAAATTGTTTAGAGCCTGAGAGACACGACAACTGAAATAAAAATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CAA 90 bp ATTACACTCACATATATTGTTTTGATACCTTGGCATACCCCACCTTGTACACTCTTCTTCAGTATCAGATaGACACAATGTCACCAGCAT +
Preference number: 5 (lower is better)
Translates to: ITLTYIVLIPWHTPPCTLFFSIR*TQCHQH
Trigger: ATGCTGGTGACATTGTGTCAATCTGATACTGAAGAA...GAGTGTACAAGGTGGGGTATGCCAAGGTATCAAAACAATATATGTGAGTGTAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CAA 90 bp CATTTTTATTTCAGTTGTCGTGTCTCTCAGGCTCTAAACAATTTCCAGCCCAAAACATTTTTATTTCAGTaGTCGTGTCTCTCAGGCTCT +
Preference number: 5 (lower is better)
Translates to: HFYFSCRVSQALNNFQPKTFLFQ*SCLSGS
Trigger: AGAGCCTGAGAGACACGACAACTGAAATAAAAATGT...TTTGGGCTGGAAATTGTTTAGAGCCTGAGAGACACGACAACTGAAATAAAAATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CAA 90 bp CATTTTTATTTCAGTTGTCGTGTCTCTCAGGCTCTAAACAATTTCCAGCCCAAACTCACATATATTGTTTaGATACCTTGGCATACCCCA +
Preference number: 5 (lower is better)
Translates to: HFYFSCRVSQALNNFQPKLTYIV*IPWHTP
Trigger: TGGGGTATGCCAAGGTATCAAAACAATATATGTGAG...TTTGGGCTGGAAATTGTTTAGAGCCTGAGAGACACGACAACTGAAATAAAAATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CAA 90 bp ATTACACTCACATATATTGTTTTGATACCTTGGCATACCCCACCTTGTACACTCACGATAAGTTCACAGTaGAAAGAACCATTTGCCAGA +
Preference number: 5 (lower is better)
Translates to: ITLTYIVLIPWHTPPCTLTISSQ*KEPFAR
Trigger: TCTGGCAAATGGTTCTTTCAACTGTGAACTTATCGT...GAGTGTACAAGGTGGGGTATGCCAAGGTATCAAAACAATATATGTGAGTGTAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS TCA 90 bp TGCGGCTTACTGCTGGCTTGCATTTTAGAATATCATCCAAATTCATaGCTTCTTGGTTCAGATCCTGAAACTCTTTATACTGCTCTTTAT +
Preference number: 5 (lower is better)
Translates to: CGLLLACILEYHPNS*LLGSDPETLYTALY
Trigger: ATAAAGAGCAGTATAAAGAGTTTCAGGATCTGAACCAAGAAGTCATGAATTTGGATGATATTCTAAAATGCAAGCCAGCAGTAAGCCGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CAA 90 bp TTTCAACCATTTAACATAAGCTATAGGCTATACCTCCTAACTACAGACTGTACACCATTTACTTCTATTTaGCCTTTCAGTTTCCACCGC +
Preference number: 5 (lower is better)
Translates to: FQPFNISYRLYLLTTDCTPFTSI*PFSFHR
Trigger: GCGGTGGAAACTGAAAGGCAAAATAGAAGTAAATGG...TGTACAGTCTGTAGTTAGGAGGTATAGCCTATAGCTTATGTTAAATGGTTGAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CAA 90 bp TTTCAACCATTTAACATAAGCTATAGGCTATACCTCCTAACTACAGACTGTACAGCCACAAATGGGGTTTaGCTTGAGAAAACAATTTGC +
Preference number: 5 (lower is better)
Translates to: FQPFNISYRLYLLTTDCTATNGV*LEKTIC
Trigger: GCAAATTGTTTTCTCAAGCAAAACCCCATTTGTGGC...TGTACAGTCTGTAGTTAGGAGGTATAGCCTATAGCTTATGTTAAATGGTTGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CAA 90 bp ATATACAGATATGTACACGATAAGTTCACAGTTGAAAGAACCATTTGCCAGAAGGCCACAAATGGGGTTTaGCTTGAGAAAACAATTTGC +
Preference number: 5 (lower is better)
Translates to: IYRYVHDKFTVERTICQKATNGV*LEKTIC
Trigger: GCAAATTGTTTTCTCAAGCAAAACCCCATTTGTGGC...CTTCTGGCAAATGGTTCTTTCAACTGTGAACTTATCGTGTACATATCTGTATAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CAA 90 bp TTTCAACCATTTAACATAAGCTATAGGCTATACCTCCTAACTACAGACTGTACAGCTGGAGGTTTGTCTTaGTTAGTGCTTCACAGTAAT +
Preference number: 5 (lower is better)
Translates to: FQPFNISYRLYLLTTDCTAGGLS*LVLHSN
Trigger: ATTACTGTGAAGCACTAACAAAGACAAACCTCCAGC...TGTACAGTCTGTAGTTAGGAGGTATAGCCTATAGCTTATGTTAAATGGTTGAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CAA 90 bp ATTACACTCACATATATTGTTTTGATACCTTGGCATACCCCACCTTGTACACTCGTGAATCTACAGCTTTaGGTTTTGATTTGTCTTAGC +
Preference number: 5 (lower is better)
Translates to: ITLTYIVLIPWHTPPCTLVNLQL*VLICLS
Trigger: GCTAAGACAAATCAAAACCAAAAGCTGTAGATTCAC...GAGTGTACAAGGTGGGGTATGCCAAGGTATCAAAACAATATATGTGAGTGTAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CAA 90 bp CATTTTTATTTCAGTTGTCGTGTCTCTCAGGCTCTAAACAATTTCCAGCCCAAAGAATGGTCTTGTACTTaGCTTAATGAACTTGCATCT +
Preference number: 5 (lower is better)
Translates to: HFYFSCRVSQALNNFQPKEWSCT*LNELAS
Trigger: AGATGCAAGTTCATTAAGCAAAGTACAAGACCATTC...TTTGGGCTGGAAATTGTTTAGAGCCTGAGAGACACGACAACTGAAATAAAAATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CAA 90 bp ATATACAGATATGTACACGATAAGTTCACAGTTGAAAGAACCATTTGCCAGAAGTATTGTTTTGATACCTaGGCATACCCCACCTTGTAC +
Preference number: 5 (lower is better)
Translates to: IYRYVHDKFTVERTICQKYCFDT*AYPTLY
Trigger: GTACAAGGTGGGGTATGCCAAGGTATCAAAACAATA...CTTCTGGCAAATGGTTCTTTCAACTGTGAACTTATCGTGTACATATCTGTATAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CAA 90 bp ATATACAGATATGTACACGATAAGTTCACAGTTGAAAGAACCATTTGCCAGAAGCAAATTCATGACTTCTaGGTTCAGATCCTGAAACTC +
Preference number: 5 (lower is better)
Translates to: IYRYVHDKFTVERTICQKQIHDF*VQILKL
Trigger: GAGTTTCAGGATCTGAACCAAGAAGTCATGAATTTG...CTTCTGGCAAATGGTTCTTTCAACTGTGAACTTATCGTGTACATATCTGTATAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CAA 90 bp TTTCAACCATTTAACATAAGCTATAGGCTATACCTCCTAACTACAGACTGTACAACATTTTTATTTCAGTaGTCGTGTCTCTCAGGCTCT +
Preference number: 5 (lower is better)
Translates to: FQPFNISYRLYLLTTDCTTFLFQ*SCLSGS
Trigger: AGAGCCTGAGAGACACGACAACTGAAATAAAAATGT...TGTACAGTCTGTAGTTAGGAGGTATAGCCTATAGCTTATGTTAAATGGTTGAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CAA 90 bp ATATACAGATATGTACACGATAAGTTCACAGTTGAAAGAACCATTTGCCAGAAGCTCACATATATTGTTTaGATACCTTGGCATACCCCA +
Preference number: 5 (lower is better)
Translates to: IYRYVHDKFTVERTICQKLTYIV*IPWHTP
Trigger: TGGGGTATGCCAAGGTATCAAAACAATATATGTGAG...CTTCTGGCAAATGGTTCTTTCAACTGTGAACTTATCGTGTACATATCTGTATAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CAA 90 bp TTTCAACCATTTAACATAAGCTATAGGCTATACCTCCTAACTACAGACTGTACAGTGAATCTACAGCTTTaGGTTTTGATTTGTCTTAGC +
Preference number: 5 (lower is better)
Translates to: FQPFNISYRLYLLTTDCTVNLQL*VLICLS
Trigger: GCTAAGACAAATCAAAACCAAAAGCTGTAGATTCAC...TGTACAGTCTGTAGTTAGGAGGTATAGCCTATAGCTTATGTTAAATGGTTGAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS-3UTR CAA 90 bp ATATACAGATATGTACACGATAAGTTCACAGTTGAAAGAACCATTTGCCAGAAGGAATGGTCTTGTACTTaGCTTAATGAACTTGCATCT +
Preference number: 5 (lower is better)
Translates to: IYRYVHDKFTVERTICQKEWSCT*LNELAS
Trigger: AGATGCAAGTTCATTAAGCAAAGTACAAGACCATTC...CTTCTGGCAAATGGTTCTTTCAACTGTGAACTTATCGTGTACATATCTGTATAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS GCA 72 bp CAATGCAATGCCCGGAGCTGCCCGCACCTCCGGCTTTaGAGACAGCCTGAGCTGGCTCACTTGGGTGAAGGG +
Preference number: 6 (lower is better)
Translates to: QCNARSCPHLRL*RQPELAHLGEG
Trigger: CCCTTCACCCAAGTGAGCCAGCTCAGGCTGTCTGCAAAGCCGGAGGTGCGGGCAGCTCCGGGCATTGCATTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259698.9
ENST00000644411.1
ENST00000644621.1
CDS GCA 72 bp TCAGCAACTTCCCGACCGTACCCTGTGGGCTTCAGATaGCCGAACCCACCAGGGTGGTGGAAGCTGAGGACG +
Preference number: 6 (lower is better)
Translates to: SATSRPYPVGFR*PNPPGWWKLRT
Trigger: CGTCCTCAGCTTCCACCACCCTGGTGGGTTCGGGCATCTGAAGCCCACAGGGTACGGTCGGGAAGTTGCTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000538035.6
ENST00000643623.1
CDS CCA 72 bp GGCGGCAAGCCTCAGATGGGGCCGAGGCAGGTTTTCTaGGCTCCTCTGGGTCTTCCTCCTTCAGGTGTGACT +
Preference number: 6 (lower is better)
Translates to: GGKPQMGPRQVF*APLGLPPSGVT
Trigger: AGTCACACCTGAAGGAGGAAGACCCAGAGGAGCCCAGAAAACCTGCCTCGGCCCCATCTGAGGCTTGCCGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000259698.9
ENST00000378023.8
ENST00000510784.8
ENST00000538035.6
ENST00000540914.5
ENST00000613507.4
ENST00000643623.1
ENST00000643898.2
ENST00000644411.1
ENST00000644621.1
ENST00000645100.1
ENST00000647136.1
CDS CAA 72 bp GAGCCTGTTGAGTGGGAGGTGAGGGCGCAGTCCCCGTaGGGCAGGTCACTGAAGCTGAGCGACAGTGGCATT +
Preference number: 6 (lower is better)
Translates to: EPVEWEVRAQSP*GRSLKLSDSGI
Trigger: AATGCCACTGTCGCTCAGCTTCAGTGACCTGCCCAACGGGGACTGCGCCCTCACCTCCCACTCAACAGGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000259698.9
ENST00000378023.8
ENST00000510784.8
ENST00000538035.6
ENST00000540914.5
ENST00000613507.4
ENST00000643623.1
ENST00000643898.2
ENST00000644411.1
ENST00000644621.1
ENST00000645100.1
ENST00000647136.1
CDS CAA 90 bp GGCCTGAGGGAGGGCAGGTCACTGAAGGAGCGGCTGCGGTGCAGCTaGGCAAAGAAAGTGTCTTGCAAGGCACTCAAGACAGACAGCCGC +
Preference number: 6 (lower is better)
Translates to: GLREGRSLKERLRCS*AKKVSCKALKTDSR
Trigger: GCGGCTGTCTGTCTTGAGTGCCTTGCAAGACACTTTCTTTGCCAAGCTGCACCGCAGCCGCTCCTTCAGTGACCTGCCCTCCCTCAGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259698.9
ENST00000613507.4
ENST00000644411.1
CDS TCA 72 bp CCCCGGCAGTCTCAGCAGTCACACTGCCGACCGAGGTaGTTTCCTTTCCTTGGGTTGCCCAAGCCCTCTGGA +
Preference number: 6 (lower is better)
Translates to: PRQSQQSHCRPR*FPFLGLPKPSG
Trigger: TCCAGAGGGCTTGGGCAACCCAAGGAAAGGAAATCACCTCGGTCGGCAGTGTGACTGCTGAGACTGCCGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613507.4
CDS GCA 72 bp CGGGCAGCTTTGCTGGCAGGGGATGTTGCGAAGGCTTaGTTCATTTTGCTGGCACCATCCTGGAGGCGTCGC +
Preference number: 6 (lower is better)
Translates to: RAALLAGDVAKA*FILLAPSWRRR
Trigger: GCGACGCCTCCAGGATGGTGCCAGCAAAATGAAGCAAGCCTTCGCAACATCCCCTGCCAGCAAAGCTGCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000259698.9
ENST00000378023.8
ENST00000510784.8
ENST00000538035.6
ENST00000540914.5
ENST00000613507.4
ENST00000643623.1
ENST00000643898.2
ENST00000644411.1
ENST00000644621.1
ENST00000645100.1
ENST00000647136.1
CDS CCA 72 bp GCAGTCACACTGCCGACCGAGGTGATTTCCTTTCCTTaGGTTGCCCAAGCCCTCTGGAGGGCAGCTTCCGCA +
Preference number: 6 (lower is better)
Translates to: AVTLPTEVISFP*VAQALWRAASA
Trigger: TGCGGAAGCTGCCCTCCAGAGGGCTTGGGCAACCCAAGGAAAGGAAATCACCTCGGTCGGCAGTGTGACTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613507.4
CDS CAA 72 bp CCGGGCAGCTTTGCTGGCAGGGGATGTTGCGAAGGCTaGCTTCATTTTGCTGGCACCATCCTGGAGGCGTCG +
Preference number: 6 (lower is better)
Translates to: PGSFAGRGCCEG*LHFAGTILEAS
Trigger: CGACGCCTCCAGGATGGTGCCAGCAAAATGAAGCAAGCCTTCGCAACATCCCCTGCCAGCAAAGCTGCCCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000259698.9
ENST00000378023.8
ENST00000510784.8
ENST00000538035.6
ENST00000540914.5
ENST00000613507.4
ENST00000643623.1
ENST00000643898.2
ENST00000644411.1
ENST00000644621.1
ENST00000645100.1
ENST00000647136.1
CDS TCA 72 bp TCCGGGGTACCCTGGCTGTACATGGACATTCTCCTCTaGAGGGCTGCTGCCTTGTTCCCAGCGCCTGAGGAT +
Preference number: 6 (lower is better)
Translates to: SGVPWLYMDILL*RAAALFPAPED
Trigger: ATCCTCAGGCGCTGGGAACAAGGCAGCAGCCCTTCAGAGGAGAATGTCCATGTACAGCCAGGGTACCCCGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000259698.9
ENST00000378023.8
ENST00000510784.8
ENST00000538035.6
ENST00000540914.5
ENST00000613507.4
ENST00000643623.1
ENST00000643898.2
ENST00000644411.1
ENST00000644621.1
ENST00000645100.1
ENST00000647136.1
CDS GCA 72 bp CTGAGGGAGGGCAGGTCACTGAAGGAGCGGCTGCGGTaGAGCTTGGCAAAGAAAGTGTCTTGCAAGGCACTC +
Preference number: 6 (lower is better)
Translates to: LREGRSLKERLR*SLAKKVSCKAL
Trigger: GAGTGCCTTGCAAGACACTTTCTTTGCCAAGCTGCACCGCAGCCGCTCCTTCAGTGACCTGCCCTCCCTCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259698.9
ENST00000613507.4
ENST00000644411.1
CDS CCA 72 bp CGCCTTTCCTGGAGGCCGCTGAAACCCGCAAAGGACTaGCTTCTAATGATCCCATTGGGCCCTCCAGGCGAA +
Preference number: 6 (lower is better)
Translates to: RLSWRPLKPAKD*LLMIPLGPPGE
Trigger: TTCGCCTGGAGGGCCCAATGGGATCATTAGAAGCCAGTCCTTTGCGGGTTTCAGCGGCCTCCAGGAAAGGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000259698.9
ENST00000378023.8
ENST00000510784.8
ENST00000538035.6
ENST00000540914.5
ENST00000613507.4
ENST00000643623.1
ENST00000643898.2
ENST00000644411.1
ENST00000644621.1
ENST00000645100.1
ENST00000647136.1
ENST00000647309.1
CDS CCA 72 bp GATGGTGATGTCCAGGCTCTCGTTGCCTGTGGTCAGTaGGAGAGGACTTCCTGCCACACTGGTCCCAACTCC +
Preference number: 6 (lower is better)
Translates to: DGDVQALVACGQ*ERTSCHTGPNS
Trigger: GGAGTTGGGACCAGTGTGGCAGGAAGTCCTCTCCCACTGACCACAGGCAACGAGAGCCTGGACATCACCATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259698.9
ENST00000463828.1
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS CAA 72 bp GGGAGTCTGGTCGGTAGTCCTAACGACGACGGCTCCTaGTCATGTCAGGGGCACACTCAGGGTTCTCTGGCA +
Preference number: 6 (lower is better)
Translates to: GSLVGSPNDDGS*SCQGHTQGSLA
Trigger: TGCCAGAGAACCCTGAGTGTGCCCCTGACATGACAAGGAGCCGTCGTCGTTAGGACTACCGACCAGACTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000644411.1
ENST00000644621.1
ENST00000647136.1
CDS CAA 90 bp CAGACTCTCCCGGGCAGCTTTGCTGGCAGGGGATGTTGCGAAGGCTaGCTTCATTTTGCTGGCACCATCCTGGAGGCGTCGCTGGATACA +
Preference number: 6 (lower is better)
Translates to: QTLPGSFAGRGCCEG*LHFAGTILEASLDT
Trigger: TGTATCCAGCGACGCCTCCAGGATGGTGCCAGCAAAATGAAGCAAGCCTTCGCAACATCCCCTGCCAGCAAAGCTGCCCGGGAGAGTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000259698.9
ENST00000378023.8
ENST00000510784.8
ENST00000538035.6
ENST00000540914.5
ENST00000613507.4
ENST00000643623.1
ENST00000643898.2
ENST00000644411.1
ENST00000644621.1
ENST00000645100.1
ENST00000647136.1
CDS GCA 72 bp GTTCTCTGGCATATAAAAGCCTCCGCACCAATGCAATaGCCGGAGCTGCCCGCACCTCCGGCTTTGCAGACA +
Preference number: 6 (lower is better)
Translates to: VLWHIKASAPMQ*PELPAPPALQT
Trigger: TGTCTGCAAAGCCGGAGGTGCGGGCAGCTCCGGGCATTGCATTGGTGCGGAGGCTTTTATATGCCAGAGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259698.9
ENST00000644411.1
ENST00000644621.1
CDS GCA 72 bp CAGACTCTCCCGGGCAGCTTTGCTGGCAGGGGATGTTaGGAAGGCTTGCTTCATTTTGCTGGCACCATCCTG +
Preference number: 6 (lower is better)
Translates to: QTLPGSFAGRGC*EGLLHFAGTIL
Trigger: CAGGATGGTGCCAGCAAAATGAAGCAAGCCTTCGCAACATCCCCTGCCAGCAAAGCTGCCCGGGAGAGTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000259698.9
ENST00000378023.8
ENST00000510784.8
ENST00000538035.6
ENST00000540914.5
ENST00000613507.4
ENST00000643623.1
ENST00000643898.2
ENST00000644411.1
ENST00000644621.1
ENST00000645100.1
ENST00000647136.1
CDS CAA 72 bp GGGGAAGGATGCAGCCACCTAAAGAAGGAGTGGTCTTaGAAGGTGGGCGTTTCCGGGGTACCCTGGCTGTAC +
Preference number: 6 (lower is better)
Translates to: GEGCSHLKKEWS*KVGVSGVPWLY
Trigger: GTACAGCCAGGGTACCCCGGAAACGCCCACCTTCAAAGACCACTCCTTCTTTAGGTGGCTGCATCCTTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259698.9
ENST00000613507.4
ENST00000644411.1
CDS TCA 72 bp TCTCCTCTGAAGGGCTGCTGCCTTGTTCCCAGCGCCTaGGGATGCGGTCATGTCCTCCACGTCAAATGGATA +
Preference number: 6 (lower is better)
Translates to: SPLKGCCLVPSA*GCGHVLHVKWI
Trigger: TATCCATTTGACGTGGAGGACATGACCGCATCCTCAGGCGCTGGGAACAAGGCAGCAGCCCTTCAGAGGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000259698.9
ENST00000378023.8
ENST00000510784.8
ENST00000538035.6
ENST00000540914.5
ENST00000613507.4
ENST00000643623.1
ENST00000643898.2
ENST00000644411.1
ENST00000644621.1
ENST00000645100.1
ENST00000647136.1
CDS TCA 72 bp CCGGGAGTCTGGTCGGTAGTCCATTGTCTTAGCAGGTaGCTTCAATCCAGAGAGGGGGACAGGCTAGCAGGA +
Preference number: 6 (lower is better)
Translates to: PGVWSVVHCLSR*LQSREGDRLAG
Trigger: TCCTGCTAGCCTGTCCCCCTCTCTGGATTGAAGTCACCTGCTAAGACAATGGACTACCGACCAGACTCCCGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378023.8
ENST00000540914.5
CDS CCA 72 bp CAGCCACTACCTGAGGTCGGGCTGCAAACAGCTCTTTaGTCTCACAGGTCACGCTACCTACCAGGATGTGAG +
Preference number: 6 (lower is better)
Translates to: QPLPEVGLQTAL*SHRSRYLPGCE
Trigger: CTCACATCCTGGTAGGTAGCGTGACCTGTGAGACCAAAGAGCTGTTTGCAGCCCGACCTCAGGTAGTGGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000259698.9
ENST00000378023.8
ENST00000510784.8
ENST00000538035.6
ENST00000540914.5
ENST00000613507.4
ENST00000643623.1
ENST00000643898.2
ENST00000644411.1
ENST00000644621.1
ENST00000645100.1
ENST00000647136.1
CDS CCA 72 bp CTGGAGGAAAGCAGAGGCTCAGCCCGGTCCAGAATTTaGGACACCAGGGTTCGAAACACTGGGTCTGCAAGT +
Preference number: 6 (lower is better)
Translates to: LEESRGSARSRI*DTRVRNTGSAS
Trigger: ACTTGCAGACCCAGTGTTTCGAACCCTGGTGTCCCAAATTCTGGACCGGGCTGAGCCTCTGCTTTCCTCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259698.9
ENST00000463828.1
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS CAA 72 bp TCAGACTCTCCCGGGCAGCTTTGCTGGCAGGGGATGTaGCGAAGGCTTGCTTCATTTTGCTGGCACCATCCT +
Preference number: 6 (lower is better)
Translates to: SDSPGQLCWQGM*RRLASFCWHHP
Trigger: AGGATGGTGCCAGCAAAATGAAGCAAGCCTTCGCAACATCCCCTGCCAGCAAAGCTGCCCGGGAGAGTCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000259698.9
ENST00000378023.8
ENST00000510784.8
ENST00000538035.6
ENST00000540914.5
ENST00000613507.4
ENST00000643623.1
ENST00000643898.2
ENST00000644411.1
ENST00000644621.1
ENST00000645100.1
ENST00000647136.1
CDS CAA 72 bp TCTTGCAAGGCACTCAAGACAGACAGCCGCCTGGGCTaGTCTGGGGAAGGATGCAGCCACCTAAAGAAGGAG +
Preference number: 6 (lower is better)
Translates to: SCKALKTDSRLG*SGEGCSHLKKE
Trigger: CTCCTTCTTTAGGTGGCTGCATCCTTCCCCAGACAAGCCCAGGCGGCTGTCTGTCTTGAGTGCCTTGCAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259698.9
ENST00000613507.4
ENST00000644411.1
CDS GCA 72 bp AGAAGTGCTTCTGCAACATCATTCTCAAGGAACAGGTaGTCAGCCCCAGCACCTGAGGACTGTCGGCGGCAA +
Preference number: 6 (lower is better)
Translates to: RSASATSFSRNR*SAPAPEDCRRQ
Trigger: TTGCCGCCGACAGTCCTCAGGTGCTGGGGCTGAGCACCTGTTCCTTGAGAATGATGTTGCAGAAGCACTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000259698.9
ENST00000378023.8
ENST00000510784.8
ENST00000538035.6
ENST00000540914.5
ENST00000613507.4
ENST00000643623.1
ENST00000643898.2
ENST00000644411.1
ENST00000644621.1
ENST00000645100.1
ENST00000647136.1
CDS CCA 72 bp GCTCCTTGTCATGTCAGGGGCACACTCAGGGTTCTCTaGCATATAAAAGCCTCCGCACCAATGCAATGCCCG +
Preference number: 6 (lower is better)
Translates to: APCHVRGTLRVL*HIKASAPMQCP
Trigger: CGGGCATTGCATTGGTGCGGAGGCTTTTATATGCCAGAGAACCCTGAGTGTGCCCCTGACATGACAAGGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259698.9
ENST00000644411.1
ENST00000644621.1
CDS CAA 72 bp TTGCTGGCAGGGGATGTTGCGAAGGCTTGCTTCATTTaGCTGGCACCATCCTGGAGGCGTCGCTGGATACAA +
Preference number: 6 (lower is better)
Translates to: LLAGDVAKACFI*LAPSWRRRWIQ
Trigger: TTGTATCCAGCGACGCCTCCAGGATGGTGCCAGCAAAATGAAGCAAGCCTTCGCAACATCCCCTGCCAGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000259698.9
ENST00000378023.8
ENST00000510784.8
ENST00000538035.6
ENST00000540914.5
ENST00000613507.4
ENST00000643623.1
ENST00000643898.2
ENST00000644411.1
ENST00000644621.1
ENST00000645100.1
ENST00000647136.1
CDS GCA 72 bp CTCAGAGGCCTCCTCAGACTCTTGCAGAAGTGCTTCTaGAACATCATTCTCAAGGAACAGGTGCTCAGCCCC +
Preference number: 6 (lower is better)
Translates to: LRGLLRLLQKCF*NIILKEQVLSP
Trigger: GGGGCTGAGCACCTGTTCCTTGAGAATGATGTTGCAGAAGCACTTCTGCAAGAGTCTGAGGAGGCCTCTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000259698.9
ENST00000378023.8
ENST00000510784.8
ENST00000538035.6
ENST00000540914.5
ENST00000613507.4
ENST00000643623.1
ENST00000643898.2
ENST00000644411.1
ENST00000644621.1
ENST00000645100.1
ENST00000647136.1
CDS CCA 72 bp TGGCAGGGGATGTTGCGAAGGCTTGCTTCATTTTGCTaGCACCATCCTGGAGGCGTCGCTGGATACAATAAG +
Preference number: 6 (lower is better)
Translates to: WQGMLRRLASFC*HHPGGVAGYNK
Trigger: CTTATTGTATCCAGCGACGCCTCCAGGATGGTGCCAGCAAAATGAAGCAAGCCTTCGCAACATCCCCTGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000259698.9
ENST00000378023.8
ENST00000510784.8
ENST00000538035.6
ENST00000540914.5
ENST00000613507.4
ENST00000643623.1
ENST00000643898.2
ENST00000644411.1
ENST00000644621.1
ENST00000645100.1
ENST00000647136.1
CDS CCA 72 bp TTCAGTGAGCGCTTCACTGAGATGCCCCCTGGCTTCTaGGTGAACCGACCTGTAACTGTGTTTCTCAGTCTC +
Preference number: 6 (lower is better)
Translates to: FSERFTEMPPGF*VNRPVTVFLSL
Trigger: GAGACTGAGAAACACAGTTACAGGTCGGTTCACCCAGAAGCCAGGGGGCATCTCAGTGAAGCGCTCACTGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS CCA 72 bp GAGAAAACAATTTGCTGCACGAGTTGGGTGCAGTACTaGAGGTGCCTGACGATGGTGATGTCCAGGCTCTCG +
Preference number: 6 (lower is better)
Translates to: EKTICCTSWVQY*RCLTMVMSRLS
Trigger: CGAGAGCCTGGACATCACCATCGTCAGGCACCTCCAGTACTGCACCCAACTCGTGCAGCAAATTGTTTTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259698.9
ENST00000463828.1
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS CCA 72 bp TTCAGTGAGCGCTTCACTGAGATGCCCCCTGGCTTCTaGGTGAACCGACCTGTAACTATTGAAGGTGGGCAA +
Preference number: 6 (lower is better)
Translates to: FSERFTEMPPGF*VNRPVTIEGGQ
Trigger: TTGCCCACCTTCAATAGTTACAGGTCGGTTCACCCAGAAGCCAGGGGGCATCTCAGTGAAGCGCTCACTGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000463828.1
CDS CAA 90 bp AAGAAAGTGTCTTGCAAGGCACTCAAGACAGACAGCCGCCTGGGCTaGTCTGGGGAAGGATGCAGCCACCTAAAGAAGGAGTGGTCTTTG +
Preference number: 6 (lower is better)
Translates to: KKVSCKALKTDSRLG*SGEGCSHLKKEWSL
Trigger: CAAAGACCACTCCTTCTTTAGGTGGCTGCATCCTTCCCCAGACAAGCCCAGGCGGCTGTCTGTCTTGAGTGCCTTGCAAGACACTTTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259698.9
ENST00000613507.4
ENST00000644411.1
CDS CAA 90 bp GACCTTCCTCAAAGCTACGCGAAGCAGCTCAGCAAGGAAGGCAGTTaGAGCGAGTTACTTCCCCAGAGAGAGAAGGACAAACAGCCTCCT +
Preference number: 6 (lower is better)
Translates to: DLPQSYAKQLSKEGS*SELLPQREKDKQPP
Trigger: AGGAGGCTGTTTGTCCTTCTCTCTCTGGGGAAGTAACTCGCTCAAACTGCCTTCCTTGCTGAGCTGCTTCGCGTAGCTTTGAGGAAGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378023.8
ENST00000540914.5
CDS TCA 72 bp TCTTTGGTCTCACAGGTCACGCTACCTACCAGGATGTaGGTTGCTAGCCCTTTGAGCTCCGTGACCTTGATG +
Preference number: 6 (lower is better)
Translates to: SLVSQVTLPTRM*VASPLSSVTLM
Trigger: CATCAAGGTCACGGAGCTCAAAGGGCTAGCAACTCACATCCTGGTAGGTAGCGTGACCTGTGAGACCAAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000259698.9
ENST00000378023.8
ENST00000510784.8
ENST00000538035.6
ENST00000540914.5
ENST00000613507.4
ENST00000643623.1
ENST00000643898.2
ENST00000644411.1
ENST00000644621.1
ENST00000645100.1
ENST00000647136.1
CDS CAA 90 bp AGTGTCCAGTTCCACAGGCTTGAGCTCAGAGGCCTCCTCAGACTCTaGCAGAAGTGCTTCTGCAACATCATTCTCAAGGAACAGGTGCTC +
Preference number: 6 (lower is better)
Translates to: SVQFHRLELRGLLRL*QKCFCNIILKEQVL
Trigger: GAGCACCTGTTCCTTGAGAATGATGTTGCAGAAGCACTTCTGCAAGAGTCTGAGGAGGCCTCTGAGCTCAAGCCTGTGGAACTGGACACT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000259698.9
ENST00000378023.8
ENST00000510784.8
ENST00000538035.6
ENST00000540914.5
ENST00000613507.4
ENST00000643623.1
ENST00000643898.2
ENST00000644411.1
ENST00000644621.1
ENST00000645100.1
ENST00000647136.1
CDS CAA 90 bp AGCTGCTTTGTGATGTTTCCTTCCGAAGTGTCCAGTTCCACAGGCTaGAGCTCAGAGGCCTCCTCAGACTCTTGCAGAAGTGCTTCTGCA +
Preference number: 6 (lower is better)
Translates to: SCFVMFPSEVSSSTG*SSEASSDSCRSASA
Trigger: TGCAGAAGCACTTCTGCAAGAGTCTGAGGAGGCCTCTGAGCTCAAGCCTGTGGAACTGGACACTTCGGAAGGAAACATCACAAAGCAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000259698.9
ENST00000378023.8
ENST00000510784.8
ENST00000538035.6
ENST00000540914.5
ENST00000613507.4
ENST00000643623.1
ENST00000643898.2
ENST00000644411.1
ENST00000644621.1
ENST00000645100.1
ENST00000647136.1
CDS CAA 90 bp ACTTCAATGGTGCACATATTCTCTGTGTACTCCTTGAAGCTCCGATaGATCTCTGTCAGACTCTCCCGGGCAGCTTTGCTGGCAGGGGAT +
Preference number: 6 (lower is better)
Translates to: TSMVHIFSVYSLKLR*ISVRLSRAALLAGD
Trigger: ATCCCCTGCCAGCAAAGCTGCCCGGGAGAGTCTGACAGAGATCAATCGGAGCTTCAAGGAGTACACAGAGAATATGTGCACCATTGAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000259698.9
ENST00000378023.8
ENST00000510784.8
ENST00000538035.6
ENST00000540914.5
ENST00000613507.4
ENST00000643623.1
ENST00000643898.2
ENST00000644411.1
ENST00000644621.1
ENST00000645100.1
ENST00000647136.1
CDS CAA 90 bp ACCAGGGTTCGAAACACTGGGTCTGCAAGTCCTGGATATTCTTTGTaGACAGTTCTGGCAAAGCTGGCCTCCAGCTGCTTCATCACTCTG +
Preference number: 6 (lower is better)
Translates to: TRVRNTGSASPGYSL*TVLAKLASSCFITL
Trigger: CAGAGTGATGAAGCAGCTGGAGGCCAGCTTTGCCAGAACTGTCAACAAAGAATATCCAGGACTTGCAGACCCAGTGTTTCGAACCCTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259698.9
ENST00000463828.1
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS CAA 90 bp GACACCAGGGTTCGAAACACTGGGTCTGCAAGTCCTGGATATTCTTaGTTGACAGTTCTGGCAAAGCTGGCCTCCAGCTGCTTCATCACT +
Preference number: 6 (lower is better)
Translates to: DTRVRNTGSASPGYS*LTVLAKLASSCFIT
Trigger: AGTGATGAAGCAGCTGGAGGCCAGCTTTGCCAGAACTGTCAACAAAGAATATCCAGGACTTGCAGACCCAGTGTTTCGAACCCTGGTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259698.9
ENST00000463828.1
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS TCA 72 bp AAAGCTACGCGAAGCAGCTCAGCAAGGAAGGCAGTTTaGGCGAGTTACTTCCCCAGAGAGAGAAGGACAAAC +
Preference number: 6 (lower is better)
Translates to: KATRSSSARKAV*ASYFPRERRTN
Trigger: GTTTGTCCTTCTCTCTCTGGGGAAGTAACTCGCTCAAACTGCCTTCCTTGCTGAGCTGCTTCGCGTAGCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378023.8
ENST00000540914.5
CDS CCA 72 bp TTTTCAATGAAGGAGTTACACCTGGATCGCCTTTCCTaGAGGCCGCTGAAACCCGCAAAGGACTGGCTTCTA +
Preference number: 6 (lower is better)
Translates to: FSMKELHLDRLS*RPLKPAKDWLL
Trigger: TAGAAGCCAGTCCTTTGCGGGTTTCAGCGGCCTCCAGGAAAGGCGATCCAGGTGTAACTCCTTCATTGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000259698.9
ENST00000378023.8
ENST00000510784.8
ENST00000538035.6
ENST00000540914.5
ENST00000613507.4
ENST00000643623.1
ENST00000643898.2
ENST00000644411.1
ENST00000644621.1
ENST00000645100.1
ENST00000647136.1
ENST00000647309.1
CDS CCA 72 bp GGACACCAGGGTTCGAAACACTGGGTCTGCAAGTCCTaGATATTCTTTGTTGACAGTTCTGGCAAAGCTGGC +
Preference number: 6 (lower is better)
Translates to: GHQGSKHWVCKS*IFFVDSSGKAG
Trigger: GCCAGCTTTGCCAGAACTGTCAACAAAGAATATCCAGGACTTGCAGACCCAGTGTTTCGAACCCTGGTGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259698.9
ENST00000463828.1
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS CAA 72 bp GTGCACATATTCTCTGTGTACTCCTTGAAGCTCCGATaGATCTCTGTCAGACTCTCCCGGGCAGCTTTGCTG +
Preference number: 6 (lower is better)
Translates to: VHIFSVYSLKLR*ISVRLSRAALL
Trigger: CAGCAAAGCTGCCCGGGAGAGTCTGACAGAGATCAATCGGAGCTTCAAGGAGTACACAGAGAATATGTGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000259698.9
ENST00000378023.8
ENST00000510784.8
ENST00000538035.6
ENST00000540914.5
ENST00000613507.4
ENST00000643623.1
ENST00000643898.2
ENST00000644411.1
ENST00000644621.1
ENST00000645100.1
ENST00000647136.1
CDS CAA 72 bp CGAAACACTGGGTCTGCAAGTCCTGGATATTCTTTGTaGACAGTTCTGGCAAAGCTGGCCTCCAGCTGCTTC +
Preference number: 6 (lower is better)
Translates to: RNTGSASPGYSL*TVLAKLASSCF
Trigger: GAAGCAGCTGGAGGCCAGCTTTGCCAGAACTGTCAACAAAGAATATCCAGGACTTGCAGACCCAGTGTTTCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259698.9
ENST00000463828.1
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS CAA 72 bp GTTCGAAACACTGGGTCTGCAAGTCCTGGATATTCTTaGTTGACAGTTCTGGCAAAGCTGGCCTCCAGCTGC +
Preference number: 6 (lower is better)
Translates to: VRNTGSASPGYS*LTVLAKLASSC
Trigger: GCAGCTGGAGGCCAGCTTTGCCAGAACTGTCAACAAAGAATATCCAGGACTTGCAGACCCAGTGTTTCGAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259698.9
ENST00000463828.1
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS CAA 72 bp CAAAGCTACGCGAAGCAGCTCAGCAAGGAAGGCAGTTaGAGCGAGTTACTTCCCCAGAGAGAGAAGGACAAA +
Preference number: 6 (lower is better)
Translates to: QSYAKQLSKEGS*SELLPQREKDK
Trigger: TTTGTCCTTCTCTCTCTGGGGAAGTAACTCGCTCAAACTGCCTTCCTTGCTGAGCTGCTTCGCGTAGCTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378023.8
ENST00000540914.5
CDS CAA 72 bp TTTCTGTGCACAAACCACAGGTCAAGTCCACATGGTTaGCATCGGGCCCCAACAGCACCCACTGAAAACAGT +
Preference number: 6 (lower is better)
Translates to: FLCTNHRSSPHG*HRAPTAPTENS
Trigger: ACTGTTTTCAGTGGGTGCTGTTGGGGCCCGATGCAAACCATGTGGACTTGACCTGTGGTTTGTGCACAGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000463828.1
CDS CAA 72 bp CAGCCTGGACCATATGACCACCACCTGGTGAGCCGTTaGCTCCCACACGTGAATTCTGTTCTGTTCTTGAAA +
Preference number: 6 (lower is better)
Translates to: QPGPYDHHLVSR*LPHVNSVLFLK
Trigger: TTTCAAGAACAGAACAGAATTCACGTGTGGGAGCAAACGGCTCACCAGGTGGTGGTCATATGGTCCAGGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000645703.1
ENST00000647309.1
CDS TCA 72 bp GAAACACTGGGTCTGCAAGTCCTGGATATTCTTTGTTaGCAGTTCTGGCAAAGCTGGCCTCCAGCTGCTTCA +
Preference number: 6 (lower is better)
Translates to: ETLGLQVLDILC*QFWQSWPPAAS
Trigger: TGAAGCAGCTGGAGGCCAGCTTTGCCAGAACTGTCAACAAAGAATATCCAGGACTTGCAGACCCAGTGTTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259698.9
ENST00000463828.1
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS TCA 72 bp TGTCATCAGGTAGATTTGAAAAGAAGGAGTGGTCTTTaGAGGTGGGCGTTTCCGGGGTACCCTGGCTGTACA +
Preference number: 6 (lower is better)
Translates to: CHQVDLKRRSGL*RWAFPGYPGCT
Trigger: TGTACAGCCAGGGTACCCCGGAAACGCCCACCTTCAAAGACCACTCCTTCTTTTCAAATCTACCTGATGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000378023.8
ENST00000510784.8
ENST00000538035.6
ENST00000540914.5
ENST00000643623.1
ENST00000643898.2
ENST00000644621.1
ENST00000645100.1
ENST00000647136.1
CDS CCA 72 bp GCCTCAAGGATTTTCAGAGCCAGGCAAGCTGCTTTCTaGAGCTGGAGGTTTGTCTTTGTTAGTGCTTCACAG +
Preference number: 6 (lower is better)
Translates to: ASRIFRARQAAF*SWRFVFVSASQ
Trigger: CTGTGAAGCACTAACAAAGACAAACCTCCAGCTCCAGAAAGCAGCTTGCCTGGCTCTGAAAATCCTTGAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS CAA 90 bp ATGACGACCTCCGACTTTAACACAGTCTCGAGGAAATTTGTCCAATaGTTCATATGCCAGCCGCCCATCTTCTCCCAGAGACAAGAGGGT +
Preference number: 6 (lower is better)
Translates to: MTTSDFNTVSRKFVQ*FICQPPIFSQRQEG
Trigger: ACCCTCTTGTCTCTGGGAGAAGATGGGCGGCTGGCATATGAACAATTGGACAAATTTCCTCGAGACTGTGTTAAAGTCGGAGGTCGTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS TCA 72 bp TGTAGCAGTTTTTCATCTCTTAGTGATTGCAGAGTCTaGACCATGGAAACTTGCCTGGCCAGCTGGCTCAGG +
Preference number: 6 (lower is better)
Translates to: CSSFSSLSDCRV*TMETCLASWLR
Trigger: CCTGAGCCAGCTGGCCAGGCAAGTTTCCATGGTTCAGACTCTGCAATCACTAAGAGATGAAAAACTGCTACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS TCA 72 bp GCAGGGGATCAGAGCTTTAGAGCTTCATCATTCATGTaGGCCAAGTGCGAAATTTCAGCCTGTCTCTCCTCT +
Preference number: 6 (lower is better)
Translates to: AGDQSFRASSFM*AKCEISACLSS
Trigger: AGAGGAGAGACAGGCTGAAATTTCGCACTTGGCTCACATGAATGATGAAGCTCTAAAGCTCTGATCCCCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606385.1
CDS TCA 72 bp TTTGTCTGTCAACAAGAATCCAACAGTTCAGGCTCTTaGCACGTCCCTCTTCAGCCTAGGGTGTGCAGATGT +
Preference number: 6 (lower is better)
Translates to: FVCQQESNSSGS*HVPLQPRVCRC
Trigger: ACATCTGCACACCCTAGGCTGAAGAGGGACGTGTCAAGAGCCTGAACTGTTGGATTCTTGTTGACAGACAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000645703.1
ENST00000647309.1
CDS GCA 72 bp GGCCTTTTCCCTGAAATGCTGATTTTTGGAGGCTGCTaGCAAGTAAAGCGTCACAGCCTCACTAACTTCGTT +
Preference number: 6 (lower is better)
Translates to: GLFPEMLIFGGC*QVKRHSLTNFV
Trigger: AACGAAGTTAGTGAGGCTGTGACGCTTTACTTGGCAGCAGCCTCCAAAAATCAGCATTTCAGGGAAAAGGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS GCA 72 bp CAAGGCCTTTTCCCTGAAATGCTGATTTTTGGAGGCTaGTGCCAAGTAAAGCGTCACAGCCTCACTAACTTC +
Preference number: 6 (lower is better)
Translates to: QGLFPEMLIFGG*CQVKRHSLTNF
Trigger: GAAGTTAGTGAGGCTGTGACGCTTTACTTGGCAGCAGCCTCCAAAAATCAGCATTTCAGGGAAAAGGCCTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS GCA 72 bp AACACAGTCTCGAGGAAATTTGTCCAATTGTTCATATaGCAGCCGCCCATCTTCTCCCAGAGACAAGAGGGT +
Preference number: 6 (lower is better)
Translates to: NTVSRKFVQLFI*QPPIFSQRQEG
Trigger: ACCCTCTTGTCTCTGGGAGAAGATGGGCGGCTGGCATATGAACAATTGGACAAATTTCCTCGAGACTGTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS CAA 72 bp TCAGAGCCAGGCAAGCTGCTTTCTGGAGCTGGAGGTTaGTCTTTGTTAGTGCTTCACAGTAATAGAGCAAGG +
Preference number: 6 (lower is better)
Translates to: SEPGKLLSGAGG*SLLVLHSNRAR
Trigger: CCTTGCTCTATTACTGTGAAGCACTAACAAAGACAAACCTCCAGCTCCAGAAAGCAGCTTGCCTGGCTCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS CAA 72 bp GAGCACATTTGTACTCTGGTAAGAAGCCCAGGCCAATaGCTGCTGGGTTGTCATGGCAACAGAAATACACAC +
Preference number: 6 (lower is better)
Translates to: EHICTLVRSPGQ*LLGCHGNRNTH
Trigger: GTGTGTATTTCTGTTGCCATGACAACCCAGCAGCAATTGGCCTGGGCTTCTTACCAGAGTACAAATGTGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606385.1
CDS CAA 90 bp CAAGGATTTTCAGAGCCAGGCAAGCTGCTTTCTGGAGCTGGAGGTTaGTCTTTGTTAGTGCTTCACAGTAATAGAGCAAGGCCTTTTCCC +
Preference number: 6 (lower is better)
Translates to: QGFSEPGKLLSGAGG*SLLVLHSNRARPFP
Trigger: GGGAAAAGGCCTTGCTCTATTACTGTGAAGCACTAACAAAGACAAACCTCCAGCTCCAGAAAGCAGCTTGCCTGGCTCTGAAAATCCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS CAA 90 bp GCACATTTGTACTCTGGTAAGAAGCCCAGGCCAATTGCTGCTGGGTaGTCATGGCAACAGAAATACACACCATTTACACATCAGCTTCTG +
Preference number: 6 (lower is better)
Translates to: AHLYSGKKPRPIAAG*SWQQKYTPFTHQLL
Trigger: CAGAAGCTGATGTGTAAATGGTGTGTATTTCTGTTGCCATGACAACCCAGCAGCAATTGGCCTGGGCTTCTTACCAGAGTACAAATGTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606385.1
CDS CAA 90 bp TCGTGTCAAGAGCACATTTGTACTCTGGTAAGAAGCCCAGGCCAATaGCTGCTGGGTTGTCATGGCAACAGAAATACACACCATTTACAC +
Preference number: 6 (lower is better)
Translates to: SCQEHICTLVRSPGQ*LLGCHGNRNTHHLH
Trigger: GTGTAAATGGTGTGTATTTCTGTTGCCATGACAACCCAGCAGCAATTGGCCTGGGCTTCTTACCAGAGTACAAATGTGCTCTTGACACGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606385.1
CDS GCA 72 bp TCACTGACAGCTGCGAGTTTCTCCATCACTTGGATCTaGCTAGAAAGCTTCTCTAAGAGACTTCTTGCCACA +
Preference number: 6 (lower is better)
Translates to: SLTAASFSITWI*LESFSKRLLAT
Trigger: TGTGGCAAGAAGTCTCTTAGAGAAGCTTTCTAGGCAGATCCAAGTGATGGAGAAACTCGCAGCTGTCAGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259698.9
ENST00000463828.1
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS CCA 72 bp GGTAAGAAGCCCAGGCCAATTGCTGCTGGGTTGTCATaGCAACAGAAATACACACCATTTACACATCAGCTT +
Preference number: 6 (lower is better)
Translates to: GKKPRPIAAGLS*QQKYTPFTHQL
Trigger: AAGCTGATGTGTAAATGGTGTGTATTTCTGTTGCCATGACAACCCAGCAGCAATTGGCCTGGGCTTCTTACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606385.1
CDS CAA 72 bp TCCGACTTTAACACAGTCTCGAGGAAATTTGTCCAATaGTTCATATGCCAGCCGCCCATCTTCTCCCAGAGA +
Preference number: 6 (lower is better)
Translates to: SDFNTVSRKFVQ*FICQPPIFSQR
Trigger: TCTCTGGGAGAAGATGGGCGGCTGGCATATGAACAATTGGACAAATTTCCTCGAGACTGTGTTAAAGTCGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS CAA 72 bp TGGCAAAGTCTGATAAGCATCGTGTCAAGAGCACATTaGTACTCTGGTAAGAAGCCCAGGCCAATTGCTGCT +
Preference number: 6 (lower is better)
Translates to: WQSLISIVSRAH*YSGKKPRPIAA
Trigger: AGCAGCAATTGGCCTGGGCTTCTTACCAGAGTACAAATGTGCTCTTGACACGATGCTTATCAGACTTTGCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606385.1
CDS CAA 90 bp AAAATTGTCTGGCAAAGTCTGATAAGCATCGTGTCAAGAGCACATTaGTACTCTGGTAAGAAGCCCAGGCCAATTGCTGCTGGGTTGTCA +
Preference number: 6 (lower is better)
Translates to: KIVWQSLISIVSRAH*YSGKKPRPIAAGLS
Trigger: TGACAACCCAGCAGCAATTGGCCTGGGCTTCTTACCAGAGTACAAATGTGCTCTTGACACGATGCTTATCAGACTTTGCCAGACAATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606385.1
CDS GCA 72 bp CCGGGAGTCTGGTCGGTAGTCCCTGCTAATATTTTCTaGAGACAAAATCTGATTATGGCAAGTAAAGTTGCC +
Preference number: 6 (lower is better)
Translates to: PGVWSVVPANIF*RQNLIMASKVA
Trigger: GGCAACTTTACTTGCCATAATCAGATTTTGTCTGCAGAAAATATTAGCAGGGACTACCGACCAGACTCCCGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000645703.1
CDS CAA 72 bp TACTCTGGTAAGAAGCCCAGGCCAATTGCTGCTGGGTaGTCATGGCAACAGAAATACACACCATTTACACAT +
Preference number: 6 (lower is better)
Translates to: YSGKKPRPIAAG*SWQQKYTPFTH
Trigger: ATGTGTAAATGGTGTGTATTTCTGTTGCCATGACAACCCAGCAGCAATTGGCCTGGGCTTCTTACCAGAGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606385.1
CDS CAA 90 bp GGTGTTTACGACAGTCTACACGGCACTACTGGGTATGCTGTCTCCTaGGATTGTGTCATATTTTTAACCCAGTGGGAAATTCATAGGATC +
Preference number: 6 (lower is better)
Translates to: GVYDSLHGTTGYAVS*DCVIFLTQWEIHRI
Trigger: GATCCTATGAATTTCCCACTGGGTTAAAAATATGACACAATCCAAGGAGACAGCATACCCAGTAGTGCCGTGTAGACTGTCGTAAACACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000606385.1
CDS GCA 72 bp CATGAAAATTTCATATTGATCTCCAGGACAGAGGCGTaGAAAGCCAGCCAGACCTTTCATCTTGATGGAGAA +
Preference number: 6 (lower is better)
Translates to: HENFILISRTEA*KASQTFHLDGE
Trigger: TTCTCCATCAAGATGAAAGGTCTGGCTGGCTTTGCACGCCTCTGTCCTGGAGATCAATATGAAATTTTCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000259698.9
ENST00000378023.8
ENST00000510784.8
ENST00000538035.6
ENST00000540914.5
ENST00000613507.4
ENST00000643623.1
ENST00000643898.2
ENST00000644411.1
ENST00000644621.1
ENST00000645100.1
ENST00000647136.1
CDS CAA 72 bp AGCTTCTCTAAGAGACTTCTTGCCACAAATGGGGTTTaGCTTGAGAAAACAATTTGCTGCACGAGTTGGGTG +
Preference number: 6 (lower is better)
Translates to: SFSKRLLATNGV*LEKTICCTSWV
Trigger: CACCCAACTCGTGCAGCAAATTGTTTTCTCAAGCAAAACCCCATTTGTGGCAAGAAGTCTCTTAGAGAAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000259698.9
ENST00000463828.1
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS CAA 72 bp ACATGGGAAAACGTCTTTCGGTCTTTTAAATCACAGTaGTCTCATTCACCCTCAGTGATCTCCGTCCAAGAG +
Preference number: 6 (lower is better)
Translates to: TWENVFRSFKSQ*SHSPSVISVQE
Trigger: CTCTTGGACGGAGATCACTGAGGGTGAATGAGACAACTGTGATTTAAAAGACCGAAAGACGTTTTCCCATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000473070.1
ENST00000510784.8
ENST00000540914.5
ENST00000644411.1
ENST00000645100.1
ENST00000647136.1
CDS CAA 72 bp GACAGTCTACACGGCACTACTGGGTATGCTGTCTCCTaGGATTGTGTCATATTTTTAACCCAGTGGGAAATT +
Preference number: 6 (lower is better)
Translates to: DSLHGTTGYAVS*DCVIFLTQWEI
Trigger: AATTTCCCACTGGGTTAAAAATATGACACAATCCAAGGAGACAGCATACCCAGTAGTGCCGTGTAGACTGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000606385.1
CDS TCA 72 bp TCAGGAAATCAAAGCTTTCTAAAGCACTTTCAACTGTaGGACTTAAACTGGAAGACCTGCTGCGGCTTACTG +
Preference number: 6 (lower is better)
Translates to: SGNQSFLKHFQL*DLNWKTCCGLL
Trigger: CAGTAAGCCGCAGCAGGTCTTCCAGTTTAAGTCTCACAGTTGAAAGTGCTTTAGAAAGCTTTGATTTCCTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259698.9
ENST00000538035.6
ENST00000613507.4
ENST00000643898.2
CDS TCA 72 bp CTAGCAGGAAAAAGGGTAAATAGTTACTGCCCAGATTaGAGACTCCAAAGTGGGCAGACAACAAATCGGTAT +
Preference number: 6 (lower is better)
Translates to: LAGKRVNSYCPD*RLQSGQTTNRY
Trigger: ATACCGATTTGTTGTCTGCCCACTTTGGAGTCTTCAATCTGGGCAGTAACTATTTACCCTTTTTCCTGCTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378023.8
ENST00000540914.5