RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RINL (Homo sapiens)

Ensembl gene IDs: ENSG00000187994

Ensembl transcript IDs: ENST00000589111.5, ENST00000591812.2, ENST00000593424.5, ENST00000593809.1, ENST00000596919.5, ENST00000596961.1, ENST00000598048.1, ENST00000598904.5, ENST00000599911.1, ENST00000602238.1, ENST00000634378.1, ENST00000634563.1, ENST00000634567.1, ENST00000634655.1, ENST00000634669.1, ENST00000634936.1, ENST00000635119.1, ENST00000635328.1, ENST00000635411.1, ENST00000635542.2

Found 330 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AGGGGTCCCAGGAAAAGGGAACAGCCTACCTCTGGGCCTTTGCACTaGCTCATCCTGCTTCTCGGAATGCTCTTCCTAATACCCACTCTG +
Preference number: 1 (lower is better)
Translates to: RGPRKREQPTSGPLH*LILLLGMLFLIPTL
Trigger: CAGAGTGGGTATTAGGAAGAGCATTCCGAGAAGCAGGATGAGCCAGTGCAAAGGCCCAGAGGTAGGCTGTTCCCTTTTCCTGGGACCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000591812.2
ENST00000593424.5
ENST00000634655.1
ENST00000635542.2
3UTR-3UTR GCA 90 bp GGGGTCCCAGGAAAAGGGAACAGCCTACCTCTGGGCCTTTGCACTGGCTCATCCGGGGTCCCACTGTTTTaGCCAGGCTGGTCTCAAACT +
Preference number: 2 (lower is better)
Translates to: GVPGKGNSLPLGLCTGSSGVPLF*PGWSQT
Trigger: AGTTTGAGACCAGCCTGGGCAAAACAGTGGGACCCC...GGATGAGCCAGTGCAAAGGCCCAGAGGTAGGCTGTTCCCTTTTCCTGGGACCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000591812.2
ENST00000593424.5
ENST00000634655.1
ENST00000635542.2
3UTR-3UTR TCA 90 bp GGGGTCCCAGGAAAAGGGAACAGCCTACCTCTGGGCCTTTGCACTGGCTCATCCTTGGGATTACAGGCATaGACGGAGGGGTGTGAAACC +
Preference number: 2 (lower is better)
Translates to: GVPGKGNSLPLGLCTGSSLGLQA*TEGCET
Trigger: GGTTTCACACCCCTCCGTTCATGCCTGTAATCCCAA...GGATGAGCCAGTGCAAAGGCCCAGAGGTAGGCTGTTCCCTTTTCCTGGGACCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000591812.2
ENST00000593424.5
ENST00000634655.1
ENST00000635542.2
3UTR-3UTR TCA 90 bp GAGGGGTCCCAGGAAAAGGGAACAGCCTACCTCTGGGCCTTTGCACTGGCTCATTTGGGATTACAGGCATaGACGGAGGGGTGTGAAACC +
Preference number: 2 (lower is better)
Translates to: EGSQEKGTAYLWAFALAHLGLQA*TEGCET
Trigger: GGTTTCACACCCCTCCGTTCATGCCTGTAATCCCAA...ATGAGCCAGTGCAAAGGCCCAGAGGTAGGCTGTTCCCTTTTCCTGGGACCCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000591812.2
ENST00000593424.5
ENST00000634655.1
ENST00000635542.2
3UTR-3UTR TCA 90 bp GAGGGGTCCCAGGAAAAGGGAACAGCCTACCTCTGGGCCTTTGCACTGGCTCATAACTGCAAAGCCTCCTaGGTAGCTGGTACCACAGGA +
Preference number: 2 (lower is better)
Translates to: EGSQEKGTAYLWAFALAHNCKAS*VAGTTG
Trigger: TCCTGTGGTACCAGCTACTCAGGAGGCTTTGCAGTT...ATGAGCCAGTGCAAAGGCCCAGAGGTAGGCTGTTCCCTTTTCCTGGGACCCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000591812.2
ENST00000593424.5
ENST00000634655.1
ENST00000635542.2
3UTR-3UTR GCA 90 bp CCCTGTTCCTCAAGCAAGATGCCAGACGTACCTGGGTCAGTCCAGACTCCTGACCTACCTCTGGGCCTTTaGACTGGCTCATCCTGCTTC +
Preference number: 2 (lower is better)
Translates to: PCSSSKMPDVPGSVQTPDLPLGL*TGSSCF
Trigger: GAAGCAGGATGAGCCAGTGCAAAGGCCCAGAGGTAG...GTCAGGAGTCTGGACTGACCCAGGTACGTCTGGCATCTTGCTTGAGGAACAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000591812.2
ENST00000593424.5
ENST00000634655.1
ENST00000635542.2
3UTR-3UTR CCA 90 bp CAGCCTACCTCTGGGCCTTTGCACTGGCTCATCCTGCTTCTCGGAATGCTCTTCAGCCTCCTGAGTAGCTaGTACCACAGGAGTACGCCA +
Preference number: 2 (lower is better)
Translates to: QPTSGPLHWLILLLGMLFSLLSS*YHRSTP
Trigger: TGGCGTACTCCTGTGGTACCAGCTACTCAGGAGGCT...GAAGAGCATTCCGAGAAGCAGGATGAGCCAGTGCAAAGGCCCAGAGGTAGGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000591812.2
ENST00000593424.5
ENST00000634655.1
ENST00000635542.2
3UTR-3UTR CCA 90 bp CCCTGTTCCTCAAGCAAGATGCCAGACGTACCTGGGTCAGTCCAGACTCCTGACTCTGGGCCTTTGCACTaGCTCATCCTGCTTCTCGGA +
Preference number: 2 (lower is better)
Translates to: PCSSSKMPDVPGSVQTPDSGPLH*LILLLG
Trigger: TCCGAGAAGCAGGATGAGCCAGTGCAAAGGCCCAGA...GTCAGGAGTCTGGACTGACCCAGGTACGTCTGGCATCTTGCTTGAGGAACAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000591812.2
ENST00000593424.5
ENST00000634655.1
ENST00000635542.2
3UTR-3UTR CCA 90 bp CCCTGTTCCTCAAGCAAGATGCCAGACGTACCTGGGTCAGTCCAGACTCCTGACGGAACAGCCTACCTCTaGGCCTTTGCACTGGCTCAT +
Preference number: 2 (lower is better)
Translates to: PCSSSKMPDVPGSVQTPDGTAYL*AFALAH
Trigger: ATGAGCCAGTGCAAAGGCCCAGAGGTAGGCTGTTCC...GTCAGGAGTCTGGACTGACCCAGGTACGTCTGGCATCTTGCTTGAGGAACAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000591812.2
ENST00000593424.5
ENST00000634655.1
ENST00000635542.2
3UTR-3UTR GCA 90 bp GCTCATCCTGCTTCTCGGAATGCTCTTCCTAATACCCACTCTGCTCCTCCCTTCGGGGTCCCACTGTTTTaGCCAGGCTGGTCTCAAACT +
Preference number: 2 (lower is better)
Translates to: AHPASRNALPNTHSAPPFGVPLF*PGWSQT
Trigger: AGTTTGAGACCAGCCTGGGCAAAACAGTGGGACCCC...GAAGGGAGGAGCAGAGTGGGTATTAGGAAGAGCATTCCGAGAAGCAGGATGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000591812.2
ENST00000593424.5
ENST00000634655.1
ENST00000635542.2
3UTR-3UTR GCA 90 bp CCCTGTTCCTCAAGCAAGATGCCAGACGTACCTGGGTCAGTCCAGACTCCTGACTCCTTCAGGCCTTTCTaGAGATGTCACCTCAGTGAG +
Preference number: 2 (lower is better)
Translates to: PCSSSKMPDVPGSVQTPDSFRPF*RCHLSE
Trigger: CTCACTGAGGTGACATCTGCAGAAAGGCCTGAAGGA...GTCAGGAGTCTGGACTGACCCAGGTACGTCTGGCATCTTGCTTGAGGAACAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000591812.2
ENST00000593424.5
ENST00000634655.1
ENST00000635542.2
3UTR-3UTR GCA 90 bp CAGCCTACCTCTGGGCCTTTGCACTGGCTCATCCTGCTTCTCGGAATGCTCTTCTCCTTCAGGCCTTTCTaGAGATGTCACCTCAGTGAG +
Preference number: 2 (lower is better)
Translates to: QPTSGPLHWLILLLGMLFSFRPF*RCHLSE
Trigger: CTCACTGAGGTGACATCTGCAGAAAGGCCTGAAGGA...GAAGAGCATTCCGAGAAGCAGGATGAGCCAGTGCAAAGGCCCAGAGGTAGGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000591812.2
ENST00000593424.5
ENST00000634655.1
ENST00000635542.2
3UTR-3UTR GCA 90 bp TGTTCCTCAAGCAAGATGCCAGACGTACCTGGGTCAGTCCAGACTCCTGACCTACTACCTCTGGGCCTTTaGACTGGCTCATCCTGCTTC +
Preference number: 2 (lower is better)
Translates to: CSSSKMPDVPGSVQTPDLLPLGL*TGSSCF
Trigger: GAAGCAGGATGAGCCAGTGCAAAGGCCCAGAGGTAG...TAGGTCAGGAGTCTGGACTGACCCAGGTACGTCTGGCATCTTGCTTGAGGAACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000591812.2
ENST00000593424.5
ENST00000634655.1
ENST00000635542.2
3UTR-3UTR CCA 90 bp GCTCATCCTGCTTCTCGGAATGCTCTTCCTAATACCCACTCTGCTCCTCCCTTCAGCCTCCTGAGTAGCTaGTACCACAGGAGTACGCCA +
Preference number: 2 (lower is better)
Translates to: AHPASRNALPNTHSAPPFSLLSS*YHRSTP
Trigger: TGGCGTACTCCTGTGGTACCAGCTACTCAGGAGGCT...GAAGGGAGGAGCAGAGTGGGTATTAGGAAGAGCATTCCGAGAAGCAGGATGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000591812.2
ENST00000593424.5
ENST00000634655.1
ENST00000635542.2
3UTR-3UTR CCA 90 bp CAAGCAAGATGCCAGACGTACCTGGGTCAGTCCAGACTCCTGACCTATGTGGTTAGCCTCCTGAGTAGCTaGTACCACAGGAGTACGCCA +
Preference number: 2 (lower is better)
Translates to: QARCQTYLGQSRLLTYVVSLLSS*YHRSTP
Trigger: TGGCGTACTCCTGTGGTACCAGCTACTCAGGAGGCT...AACCACATAGGTCAGGAGTCTGGACTGACCCAGGTACGTCTGGCATCTTGCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000591812.2
ENST00000593424.5
ENST00000634655.1
ENST00000635542.2
3UTR-3UTR TCA 90 bp TGTTCCTCAAGCAAGATGCCAGACGTACCTGGGTCAGTCCAGACTCCTGACCTATTGGGATTACAGGCATaGACGGAGGGGTGTGAAACC +
Preference number: 2 (lower is better)
Translates to: CSSSKMPDVPGSVQTPDLLGLQA*TEGCET
Trigger: GGTTTCACACCCCTCCGTTCATGCCTGTAATCCCAA...TAGGTCAGGAGTCTGGACTGACCCAGGTACGTCTGGCATCTTGCTTGAGGAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000591812.2
ENST00000593424.5
ENST00000634655.1
ENST00000635542.2
3UTR-3UTR TCA 90 bp CAAGCAAGATGCCAGACGTACCTGGGTCAGTCCAGACTCCTGACCTATGTGGTTTTGGGATTACAGGCATaGACGGAGGGGTGTGAAACC +
Preference number: 2 (lower is better)
Translates to: QARCQTYLGQSRLLTYVVLGLQA*TEGCET
Trigger: GGTTTCACACCCCTCCGTTCATGCCTGTAATCCCAA...AACCACATAGGTCAGGAGTCTGGACTGACCCAGGTACGTCTGGCATCTTGCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000591812.2
ENST00000593424.5
ENST00000634655.1
ENST00000635542.2
3UTR-3UTR GCA 90 bp GTCACCTCAGTGAGGCTTTCTCTGATACGCCTGTCTAAAACTGCAAAGCCTCCTGGGGTCCCACTGTTTTaGCCAGGCTGGTCTCAAACT +
Preference number: 2 (lower is better)
Translates to: VTSVRLSLIRLSKTAKPPGVPLF*PGWSQT
Trigger: AGTTTGAGACCAGCCTGGGCAAAACAGTGGGACCCC...AGGAGGCTTTGCAGTTTTAGACAGGCGTATCAGAGAAAGCCTCACTGAGGTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000591812.2
ENST00000593424.5
ENST00000634655.1
ENST00000635542.2
3UTR CCA 72 bp AGGGAGGGGTCCCAGGAAAAGGGAACAGCCTACCTCTaGGCCTTTGCACTGGCTCATCCTGCTTCTCGGAAT +
Preference number: 3 (lower is better)
Translates to: REGSQEKGTAYL*AFALAHPASRN
Trigger: ATTCCGAGAAGCAGGATGAGCCAGTGCAAAGGCCCAGAGGTAGGCTGTTCCCTTTTCCTGGGACCCCTCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000591812.2
ENST00000593424.5
ENST00000634655.1
ENST00000635542.2
3UTR GCA 72 bp GTCCCAGGAAAAGGGAACAGCCTACCTCTGGGCCTTTaGACTGGCTCATCCTGCTTCTCGGAATGCTCTTCC +
Preference number: 3 (lower is better)
Translates to: VPGKGNSLPLGL*TGSSCFSECSS
Trigger: GGAAGAGCATTCCGAGAAGCAGGATGAGCCAGTGCAAAGGCCCAGAGGTAGGCTGTTCCCTTTTCCTGGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000591812.2
ENST00000593424.5
ENST00000634655.1
ENST00000635542.2
3UTR TCA 72 bp CAAGATGCCAGACGTACCTGGGTCAGTCCAGACTCCTaGCCTATGTGGTTTAGGAGCAGCAAGGAGGAGGGA +
Preference number: 3 (lower is better)
Translates to: QDARRTWVSPDS*PMWFRSSKEEG
Trigger: TCCCTCCTCCTTGCTGCTCCTAAACCACATAGGTCAGGAGTCTGGACTGACCCAGGTACGTCTGGCATCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000591812.2
ENST00000593424.5
ENST00000634655.1
ENST00000635542.2
CDS-3UTR CCA 90 bp GGGGTCCCAGGAAAAGGGAACAGCCTACCTCTGGGCCTTTGCACTGGCTCATCCGGGGCGCAGGCAGCGTaGAGGTGCGCAAGGCGCTCG +
Preference number: 4 (lower is better)
Translates to: GVPGKGNSLPLGLCTGSSGAQAA*RCARRS
Trigger: CGAGCGCCTTGCGCACCTCCACGCTGCCTGCGCCCC...GGATGAGCCAGTGCAAAGGCCCAGAGGTAGGCTGTTCCCTTTTCCTGGGACCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000591812.2
ENST00000635542.2
CDS-3UTR GCA 90 bp GAGGGGTCCCAGGAAAAGGGAACAGCCTACCTCTGGGCCTTTGCACTGGCTCATAGAGGAGCGCCACCTTaGGGCGCGGGGCGCAGGCAG +
Preference number: 4 (lower is better)
Translates to: EGSQEKGTAYLWAFALAHRGAPP*GAGRRQ
Trigger: CTGCCTGCGCCCCGCGCCGCAAGGTGGCGCTCCTCT...ATGAGCCAGTGCAAAGGCCCAGAGGTAGGCTGTTCCCTTTTCCTGGGACCCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000591812.2
ENST00000593424.5
ENST00000634655.1
ENST00000635542.2
CDS-3UTR GCA 90 bp GAGGGGTCCCAGGAAAAGGGAACAGCCTACCTCTGGGCCTTTGCACTGGCTCATCTGCGGTGCCACTGGTaGAGGGAGGCGCGGGCCTCG +
Preference number: 4 (lower is better)
Translates to: EGSQEKGTAYLWAFALAHLRCHW*REARAS
Trigger: CGAGGCCCGCGCCTCCCTGCACCAGTGGCACCGCAG...ATGAGCCAGTGCAAAGGCCCAGAGGTAGGCTGTTCCCTTTTCCTGGGACCCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000591812.2
ENST00000593424.5
ENST00000634655.1
ENST00000635542.2
CDS-3UTR TCA 90 bp GGGGTCCCAGGAAAAGGGAACAGCCTACCTCTGGGCCTTTGCACTGGCTCATCCGGTCCACTTCCGGGCTaGGCGGGCCTTTCACCCAGG +
Preference number: 4 (lower is better)
Translates to: GVPGKGNSLPLGLCTGSSGPLPG*AGLSPR
Trigger: CCTGGGTGAAAGGCCCGCTCAGCCCGGAAGTGGACC...GGATGAGCCAGTGCAAAGGCCCAGAGGTAGGCTGTTCCCTTTTCCTGGGACCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000591812.2
ENST00000635542.2
CDS-3UTR GCA 90 bp GAGGGGTCCCAGGAAAAGGGAACAGCCTACCTCTGGGCCTTTGCACTGGCTCATCCGCCGCAGCTCCGGTaGTCGGAGTGTGCGGAGTCG +
Preference number: 4 (lower is better)
Translates to: EGSQEKGTAYLWAFALAHPPQLR*SECAES
Trigger: CGACTCCGCACACTCCGAGCACCGGAGCTGCGGCGG...ATGAGCCAGTGCAAAGGCCCAGAGGTAGGCTGTTCCCTTTTCCTGGGACCCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000591812.2
ENST00000635542.2
CDS-3UTR GCA 90 bp GAGGGGTCCCAGGAAAAGGGAACAGCCTACCTCTGGGCCTTTGCACTGGCTCATCAAGGCGCTCGTGGATaGGGCTCCGCAAGGCGGGGG +
Preference number: 4 (lower is better)
Translates to: EGSQEKGTAYLWAFALAHQGARG*GSARRG
Trigger: CCCCCGCCTTGCGGAGCCGCATCCACGAGCGCCTTG...ATGAGCCAGTGCAAAGGCCCAGAGGTAGGCTGTTCCCTTTTCCTGGGACCCCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000591812.2
ENST00000635542.2
CDS-3UTR GCA 90 bp CCCAGGAAAAGGGAACAGCCTACCTCTGGGCCTTTGCACTGGCTCATCCTGCTTCTGCGGTGCCACTGGTaGAGGGAGGCGCGGGCCTCG +
Preference number: 4 (lower is better)
Translates to: PRKREQPTSGPLHWLILLLRCHW*REARAS
Trigger: CGAGGCCCGCGCCTCCCTGCACCAGTGGCACCGCAG...AAGCAGGATGAGCCAGTGCAAAGGCCCAGAGGTAGGCTGTTCCCTTTTCCTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000591812.2
ENST00000593424.5
ENST00000634655.1
ENST00000635542.2
CDS-3UTR GCA 90 bp CCCTGTTCCTCAAGCAAGATGCCAGACGTACCTGGGTCAGTCCAGACTCCTGACCAAGGCGCTCGTGGATaGGGCTCCGCAAGGCGGGGG +
Preference number: 4 (lower is better)
Translates to: PCSSSKMPDVPGSVQTPDQGARG*GSARRG
Trigger: CCCCCGCCTTGCGGAGCCGCATCCACGAGCGCCTTG...GTCAGGAGTCTGGACTGACCCAGGTACGTCTGGCATCTTGCTTGAGGAACAGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000591812.2
ENST00000635542.2
CDS-3UTR GCA 90 bp TCAGTCCAGACTCCTGACCTATGTGGTTTAGGAGCAGCAAGGAGGAGGGAGGGGAGCGTCCGCCTGCGGTaGCACTGGTGCAGGGAGGCG +
Preference number: 4 (lower is better)
Translates to: SVQTPDLCGLGAARRREGSVRLR*HWCREA
Trigger: CGCCTCCCTGCACCAGTGGCACCGCAGGCGGACGCT...CCCCTCCCTCCTCCTTGCTGCTCCTAAACCACATAGGTCAGGAGTCTGGACTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000591812.2
ENST00000593424.5
ENST00000634655.1
ENST00000635542.2
CDS-3UTR GCA 90 bp CCCTGTTCCTCAAGCAAGATGCCAGACGTACCTGGGTCAGTCCAGACTCCTGACAGCGTCCGCCTGCGGTaGCACTGGTGCAGGGAGGCG +
Preference number: 4 (lower is better)
Translates to: PCSSSKMPDVPGSVQTPDSVRLR*HWCREA
Trigger: CGCCTCCCTGCACCAGTGGCACCGCAGGCGGACGCT...GTCAGGAGTCTGGACTGACCCAGGTACGTCTGGCATCTTGCTTGAGGAACAGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000591812.2
ENST00000593424.5
ENST00000634655.1
ENST00000635542.2
CDS-3UTR TCA 90 bp CCCTGTTCCTCAAGCAAGATGCCAGACGTACCTGGGTCAGTCCAGACTCCTGACAGGTGCCGCACATCCTaGAGCAGCTCCGTGGCCGGG +
Preference number: 4 (lower is better)
Translates to: PCSSSKMPDVPGSVQTPDRCRTS*SSSVAG
Trigger: CCCGGCCACGGAGCTGCTTCAGGATGTGCGGCACCT...GTCAGGAGTCTGGACTGACCCAGGTACGTCTGGCATCTTGCTTGAGGAACAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000591812.2
ENST00000635542.2
CDS-3UTR GCA 90 bp TGTTCCTCAAGCAAGATGCCAGACGTACCTGGGTCAGTCCAGACTCCTGACCTAAGAGGAGCGCCACCTTaGGGCGCGGGGCGCAGGCAG +
Preference number: 4 (lower is better)
Translates to: CSSSKMPDVPGSVQTPDLRGAPP*GAGRRQ
Trigger: CTGCCTGCGCCCCGCGCCGCAAGGTGGCGCTCCTCT...TAGGTCAGGAGTCTGGACTGACCCAGGTACGTCTGGCATCTTGCTTGAGGAACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000591812.2
ENST00000593424.5
ENST00000634655.1
ENST00000635542.2
CDS-3UTR GCA 90 bp GCTCATCCTGCTTCTCGGAATGCTCTTCCTAATACCCACTCTGCTCCTCCCTTCAGAGGAGCGCCACCTTaGGGCGCGGGGCGCAGGCAG +
Preference number: 4 (lower is better)
Translates to: AHPASRNALPNTHSAPPFRGAPP*GAGRRQ
Trigger: CTGCCTGCGCCCCGCGCCGCAAGGTGGCGCTCCTCT...GAAGGGAGGAGCAGAGTGGGTATTAGGAAGAGCATTCCGAGAAGCAGGATGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000591812.2
ENST00000593424.5
ENST00000634655.1
ENST00000635542.2
CDS-3UTR GCA 90 bp GCTCATCCTGCTTCTCGGAATGCTCTTCCTAATACCCACTCTGCTCCTCCCTTCCTGCGGTGCCACTGGTaGAGGGAGGCGCGGGCCTCG +
Preference number: 4 (lower is better)
Translates to: AHPASRNALPNTHSAPPFLRCHW*REARAS
Trigger: CGAGGCCCGCGCCTCCCTGCACCAGTGGCACCGCAG...GAAGGGAGGAGCAGAGTGGGTATTAGGAAGAGCATTCCGAGAAGCAGGATGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000591812.2
ENST00000593424.5
ENST00000634655.1
ENST00000635542.2
CDS-3UTR GCA 90 bp CCCAGGAAAAGGGAACAGCCTACCTCTGGGCCTTTGCACTGGCTCATCCTGCTTTGTGCAGCGTCCGCCTaGGGTGCCACTGGTGCAGGG +
Preference number: 4 (lower is better)
Translates to: PRKREQPTSGPLHWLILLCAASA*GATGAG
Trigger: CCCTGCACCAGTGGCACCGCAGGCGGACGCTGCACA...AAGCAGGATGAGCCAGTGCAAAGGCCCAGAGGTAGGCTGTTCCCTTTTCCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000591812.2
ENST00000593424.5
ENST00000634655.1
ENST00000635542.2
CDS-3UTR CCA 90 bp GAGGGGTCCCAGGAAAAGGGAACAGCCTACCTCTGGGCCTTTGCACTGGCTCATGGCTTCGGTACTGCCTaGCCACGTAGCTGCTCCGGG +
Preference number: 4 (lower is better)
Translates to: EGSQEKGTAYLWAFALAHGFGTA*PRSCSG
Trigger: CCCGGAGCAGCTACGTGGCCAGGCAGTACCGAAGCC...ATGAGCCAGTGCAAAGGCCCAGAGGTAGGCTGTTCCCTTTTCCTGGGACCCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000591812.2
ENST00000635542.2
CDS-3UTR CCA 90 bp CCCAGGAAAAGGGAACAGCCTACCTCTGGGCCTTTGCACTGGCTCATCCTGCTTCCTGAAGCAGCTCCGTaGCCGGGTCCCCAGACCCGT +
Preference number: 4 (lower is better)
Translates to: PRKREQPTSGPLHWLILLPEAAP*PGPQTR
Trigger: ACGGGTCTGGGGACCCGGCCACGGAGCTGCTTCAGG...AAGCAGGATGAGCCAGTGCAAAGGCCCAGAGGTAGGCTGTTCCCTTTTCCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000591812.2
ENST00000635542.2
CDS-3UTR CCA 90 bp TGTTCCTCAAGCAAGATGCCAGACGTACCTGGGTCAGTCCAGACTCCTGACCTAGGCGCCAGCACCGCCTaGCACACCGCCGTCTCCAGC +
Preference number: 4 (lower is better)
Translates to: CSSSKMPDVPGSVQTPDLGASTA*HTAVSS
Trigger: GCTGGAGACGGCGGTGTGCCAGGCGGTGCTGGCGCC...TAGGTCAGGAGTCTGGACTGACCCAGGTACGTCTGGCATCTTGCTTGAGGAACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000591812.2
ENST00000635542.2
CDS-3UTR CCA 90 bp GCTCATCCTGCTTCTCGGAATGCTCTTCCTAATACCCACTCTGCTCCTCCCTTCGGCGCCAGCACCGCCTaGCACACCGCCGTCTCCAGC +
Preference number: 4 (lower is better)
Translates to: AHPASRNALPNTHSAPPFGASTA*HTAVSS
Trigger: GCTGGAGACGGCGGTGTGCCAGGCGGTGCTGGCGCC...GAAGGGAGGAGCAGAGTGGGTATTAGGAAGAGCATTCCGAGAAGCAGGATGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000591812.2
ENST00000635542.2
CDS-3UTR CCA 90 bp CAAGCAAGATGCCAGACGTACCTGGGTCAGTCCAGACTCCTGACCTATGTGGTTGGGGCGCAGGCAGCGTaGAGGTGCGCAAGGCGCTCG +
Preference number: 4 (lower is better)
Translates to: QARCQTYLGQSRLLTYVVGAQAA*RCARRS
Trigger: CGAGCGCCTTGCGCACCTCCACGCTGCCTGCGCCCC...AACCACATAGGTCAGGAGTCTGGACTGACCCAGGTACGTCTGGCATCTTGCTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000591812.2
ENST00000635542.2
CDS-3UTR CCA 90 bp GAGGGGTCCCAGGAAAAGGGAACAGCCTACCTCTGGGCCTTTGCACTGGCTCATGCCCCCAGGGGATCTTaGTTCTCGCCTCGAGCCAGG +
Preference number: 4 (lower is better)
Translates to: EGSQEKGTAYLWAFALAHAPRGS*FSPRAR
Trigger: CCTGGCTCGAGGCGAGAACCAAGATCCCCTGGGGGC...ATGAGCCAGTGCAAAGGCCCAGAGGTAGGCTGTTCCCTTTTCCTGGGACCCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000591812.2
ENST00000593424.5
ENST00000634655.1
ENST00000635542.2
CDS-3UTR TCA 90 bp CCCAGGAAAAGGGAACAGCCTACCTCTGGGCCTTTGCACTGGCTCATCCTGCTTGTGGCTCTAGGGTGCTaGGGACCCCTAGAGGGGTCC +
Preference number: 4 (lower is better)
Translates to: PRKREQPTSGPLHWLILLVALGC*GPLEGS
Trigger: GGACCCCTCTAGGGGTCCTCAGCACCCTAGAGCCAC...AAGCAGGATGAGCCAGTGCAAAGGCCCAGAGGTAGGCTGTTCCCTTTTCCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000591812.2
ENST00000635542.2
CDS-3UTR TCA 90 bp CAAGCAAGATGCCAGACGTACCTGGGTCAGTCCAGACTCCTGACCTATGTGGTTACCCAGGAGACCCCGTaGGGCGCAGGGTTCCTGGGG +
Preference number: 4 (lower is better)
Translates to: QARCQTYLGQSRLLTYVVTQETP*GAGFLG
Trigger: CCCCAGGAACCCTGCGCCTCACGGGGTCTCCTGGGT...AACCACATAGGTCAGGAGTCTGGACTGACCCAGGTACGTCTGGCATCTTGCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000591812.2
ENST00000635542.2
CDS-3UTR TCA 90 bp CCCTGTTCCTCAAGCAAGATGCCAGACGTACCTGGGTCAGTCCAGACTCCTGACGGGACCCCCAGAATCTaGGGCGATGCGCACCCGAAG +
Preference number: 4 (lower is better)
Translates to: PCSSSKMPDVPGSVQTPDGTPRI*GDAHPK
Trigger: CTTCGGGTGCGCATCGCCTCAGATTCTGGGGGTCCC...GTCAGGAGTCTGGACTGACCCAGGTACGTCTGGCATCTTGCTTGAGGAACAGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000591812.2
ENST00000635542.2
CDS-3UTR TCA 90 bp TCAGTCCAGACTCCTGACCTATGTGGTTTAGGAGCAGCAAGGAGGAGGGAGGGGTGTCCGGGCTCCAGATaGGTTCCTCGGTCAGCGCCG +
Preference number: 4 (lower is better)
Translates to: SVQTPDLCGLGAARRREGCPGSR*VPRSAP
Trigger: CGGCGCTGACCGAGGAACTCATCTGGAGCCCGGACA...CCCCTCCCTCCTCCTTGCTGCTCCTAAACCACATAGGTCAGGAGTCTGGACTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000591812.2
ENST00000593424.5
ENST00000634655.1
ENST00000635542.2
CDS-3UTR TCA 90 bp GGGGTCCCAGGAAAAGGGAACAGCCTACCTCTGGGCCTTTGCACTGGCTCATCCGGCAGGGGGCTTGTTTaGGCCAGGAGGTTAAGGCTG +
Preference number: 4 (lower is better)
Translates to: GVPGKGNSLPLGLCTGSSGRGLV*ARRLRL
Trigger: CAGCCTTAACCTCCTGGCTCAAACAAGCCCCCTGCC...GGATGAGCCAGTGCAAAGGCCCAGAGGTAGGCTGTTCCCTTTTCCTGGGACCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000591812.2
ENST00000593424.5
ENST00000634655.1
ENST00000635542.2
CDS-3UTR GCA 90 bp CAAGCAAGATGCCAGACGTACCTGGGTCAGTCCAGACTCCTGACCTATGTGGTTCCGCCGCAGCTCCGGTaGTCGGAGTGTGCGGAGTCG +
Preference number: 4 (lower is better)
Translates to: QARCQTYLGQSRLLTYVVPPQLR*SECAES
Trigger: CGACTCCGCACACTCCGAGCACCGGAGCTGCGGCGG...AACCACATAGGTCAGGAGTCTGGACTGACCCAGGTACGTCTGGCATCTTGCTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000591812.2
ENST00000635542.2
CDS-3UTR GCA 90 bp TCAGTCCAGACTCCTGACCTATGTGGTTTAGGAGCAGCAAGGAGGAGGGAGGGGCAGGCAGCGTGGAGGTaGGCAAGGCGCTCGTGGATG +
Preference number: 4 (lower is better)
Translates to: SVQTPDLCGLGAARRREGQAAWR*ARRSWM
Trigger: CATCCACGAGCGCCTTGCGCACCTCCACGCTGCCTG...CCCCTCCCTCCTCCTTGCTGCTCCTAAACCACATAGGTCAGGAGTCTGGACTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000591812.2
ENST00000635542.2
CDS-3UTR GCA 90 bp CCCAGGAAAAGGGAACAGCCTACCTCTGGGCCTTTGCACTGGCTCATCCTGCTTCAGGCAGCGTGGAGGTaGGCAAGGCGCTCGTGGATG +
Preference number: 4 (lower is better)
Translates to: PRKREQPTSGPLHWLILLQAAWR*ARRSWM
Trigger: CATCCACGAGCGCCTTGCGCACCTCCACGCTGCCTG...AAGCAGGATGAGCCAGTGCAAAGGCCCAGAGGTAGGCTGTTCCCTTTTCCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000591812.2
ENST00000635542.2
CDS-3UTR CCA 90 bp CCCAGGAAAAGGGAACAGCCTACCTCTGGGCCTTTGCACTGGCTCATCCTGCTTAGAGCCGGCCCAGGATaGTCCACTTCCGGGCTGAGC +
Preference number: 4 (lower is better)
Translates to: PRKREQPTSGPLHWLILLRAGPG*STSGLS
Trigger: GCTCAGCCCGGAAGTGGACCATCCTGGGCCGGCTCT...AAGCAGGATGAGCCAGTGCAAAGGCCCAGAGGTAGGCTGTTCCCTTTTCCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000591812.2
ENST00000635542.2
CDS-3UTR CCA 90 bp CCCAGGAAAAGGGAACAGCCTACCTCTGGGCCTTTGCACTGGCTCATCCTGCTTGGCTTCGGTACTGCCTaGCCACGTAGCTGCTCCGGG +
Preference number: 4 (lower is better)
Translates to: PRKREQPTSGPLHWLILLGFGTA*PRSCSG
Trigger: CCCGGAGCAGCTACGTGGCCAGGCAGTACCGAAGCC...AAGCAGGATGAGCCAGTGCAAAGGCCCAGAGGTAGGCTGTTCCCTTTTCCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000591812.2
ENST00000635542.2
CDS-3UTR CCA 90 bp CCCAGGAAAAGGGAACAGCCTACCTCTGGGCCTTTGCACTGGCTCATCCTGCTTGGGTCCCCAGACCCGTaGGGACCCCCAGAATCTGAG +
Preference number: 4 (lower is better)
Translates to: PRKREQPTSGPLHWLILLGSPDP*GPPESE
Trigger: CTCAGATTCTGGGGGTCCCCACGGGTCTGGGGACCC...AAGCAGGATGAGCCAGTGCAAAGGCCCAGAGGTAGGCTGTTCCCTTTTCCTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000591812.2
ENST00000635542.2
CDS-3UTR CCA 90 bp CAGCCTACCTCTGGGCCTTTGCACTGGCTCATCCTGCTTCTCGGAATGCTCTTCGGGTCCCCAGACCCGTaGGGACCCCCAGAATCTGAG +
Preference number: 4 (lower is better)
Translates to: QPTSGPLHWLILLLGMLFGSPDP*GPPESE
Trigger: CTCAGATTCTGGGGGTCCCCACGGGTCTGGGGACCC...GAAGAGCATTCCGAGAAGCAGGATGAGCCAGTGCAAAGGCCCAGAGGTAGGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000591812.2
ENST00000635542.2
CDS-3UTR CCA 90 bp CCCAGGAAAAGGGAACAGCCTACCTCTGGGCCTTTGCACTGGCTCATCCTGCTTGCCCCCAGGGGATCTTaGTTCTCGCCTCGAGCCAGG +
Preference number: 4 (lower is better)
Translates to: PRKREQPTSGPLHWLILLAPRGS*FSPRAR
Trigger: CCTGGCTCGAGGCGAGAACCAAGATCCCCTGGGGGC...AAGCAGGATGAGCCAGTGCAAAGGCCCAGAGGTAGGCTGTTCCCTTTTCCTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000591812.2
ENST00000593424.5
ENST00000634655.1
ENST00000635542.2
CDS-3UTR TCA 90 bp GGGGTCCCAGGAAAAGGGAACAGCCTACCTCTGGGCCTTTGCACTGGCTCATCCACTGGACGTGAATGGTaGGCACGTCCTCAGGGCCTT +
Preference number: 4 (lower is better)
Translates to: GVPGKGNSLPLGLCTGSSTGREW*ARPQGL
Trigger: AAGGCCCTGAGGACGTGCTCACCATTCACGTCCAGT...GGATGAGCCAGTGCAAAGGCCCAGAGGTAGGCTGTTCCCTTTTCCTGGGACCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000591812.2
ENST00000635542.2
CDS-3UTR GCA 90 bp GGGGTCCCAGGAAAAGGGAACAGCCTACCTCTGGGCCTTTGCACTGGCTCATCCTGTGGGGACTTCAGGTaGCTTGTCTTCTGGCTGGGC +
Preference number: 4 (lower is better)
Translates to: GVPGKGNSLPLGLCTGSSCGDFR*LVFWLG
Trigger: GCCCAGCCAGAAGACAAGGCACCTGAAGTCCCCACA...GGATGAGCCAGTGCAAAGGCCCAGAGGTAGGCTGTTCCCTTTTCCTGGGACCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000591812.2
ENST00000635542.2
CDS-3UTR GCA 90 bp GGGGTCCCAGGAAAAGGGAACAGCCTACCTCTGGGCCTTTGCACTGGCTCATCCGGGGCAGGTCTGGCATaGAGAGGTTGGAGGATTCCA +
Preference number: 4 (lower is better)
Translates to: GVPGKGNSLPLGLCTGSSGAGLA*RGWRIP
Trigger: TGGAATCCTCCAACCTCTGCATGCCAGACCTGCCCC...GGATGAGCCAGTGCAAAGGCCCAGAGGTAGGCTGTTCCCTTTTCCTGGGACCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000591812.2
ENST00000635542.2
CDS-3UTR GCA 90 bp GGGGTCCCAGGAAAAGGGAACAGCCTACCTCTGGGCCTTTGCACTGGCTCATCCAACTCTACGTCCAGCTaGGTGTCCCCAATGTCCGGG +
Preference number: 4 (lower is better)
Translates to: GVPGKGNSLPLGLCTGSSNSTSS*VSPMSG
Trigger: CCCGGACATTGGGGACACGCAGCTGGACGTAGAGTT...GGATGAGCCAGTGCAAAGGCCCAGAGGTAGGCTGTTCCCTTTTCCTGGGACCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000591812.2
ENST00000593424.5
ENST00000634655.1
ENST00000635542.2
CDS-3UTR GCA 90 bp GTCACCTCAGTGAGGCTTTCTCTGATACGCCTGTCTAAAACTGCAAAGCCTCCTCTGCGGTGCCACTGGTaGAGGGAGGCGCGGGCCTCG +
Preference number: 4 (lower is better)
Translates to: VTSVRLSLIRLSKTAKPPLRCHW*REARAS
Trigger: CGAGGCCCGCGCCTCCCTGCACCAGTGGCACCGCAG...AGGAGGCTTTGCAGTTTTAGACAGGCGTATCAGAGAAAGCCTCACTGAGGTGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000591812.2
ENST00000593424.5
ENST00000634655.1
ENST00000635542.2
CDS-3UTR GCA 90 bp TGTTCCTCAAGCAAGATGCCAGACGTACCTGGGTCAGTCCAGACTCCTGACCTATGTGCAGCGTCCGCCTaGGGTGCCACTGGTGCAGGG +
Preference number: 4 (lower is better)
Translates to: CSSSKMPDVPGSVQTPDLCAASA*GATGAG
Trigger: CCCTGCACCAGTGGCACCGCAGGCGGACGCTGCACA...TAGGTCAGGAGTCTGGACTGACCCAGGTACGTCTGGCATCTTGCTTGAGGAACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000591812.2
ENST00000593424.5
ENST00000634655.1
ENST00000635542.2
CDS-3UTR GCA 90 bp GGGGTCCCAGGAAAAGGGAACAGCCTACCTCTGGGCCTTTGCACTGGCTCATCCTTGCCCAGGCTGGAGTaGAATGGCGCAATCTCCGCT +
Preference number: 4 (lower is better)
Translates to: GVPGKGNSLPLGLCTGSSLPRLE*NGAISA
Trigger: AGCGGAGATTGCGCCATTGCACTCCAGCCTGGGCAA...GGATGAGCCAGTGCAAAGGCCCAGAGGTAGGCTGTTCCCTTTTCCTGGGACCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000591812.2
ENST00000593424.5
ENST00000634655.1
ENST00000635542.2
CDS-3UTR CCA 90 bp TCAGTCCAGACTCCTGACCTATGTGGTTTAGGAGCAGCAAGGAGGAGGGAGGGGCTCAACACCAGGGCCTaGCTGGGGTCACGTCCTGTG +
Preference number: 4 (lower is better)
Translates to: SVQTPDLCGLGAARRREGLNTRA*LGSRPV
Trigger: CACAGGACGTGACCCCAGCCAGGCCCTGGTGTTGAG...CCCCTCCCTCCTCCTTGCTGCTCCTAAACCACATAGGTCAGGAGTCTGGACTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000591812.2
ENST00000635542.2
CDS-3UTR CCA 90 bp GGGGTCCCAGGAAAAGGGAACAGCCTACCTCTGGGCCTTTGCACTGGCTCATCCGAGATGGGGCAGGTCTaGCATGCAGAGGTTGGAGGA +
Preference number: 4 (lower is better)
Translates to: GVPGKGNSLPLGLCTGSSEMGQV*HAEVGG
Trigger: TCCTCCAACCTCTGCATGCCAGACCTGCCCCATCTC...GGATGAGCCAGTGCAAAGGCCCAGAGGTAGGCTGTTCCCTTTTCCTGGGACCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000591812.2
ENST00000635542.2
CDS-3UTR CCA 90 bp GAGGGGTCCCAGGAAAAGGGAACAGCCTACCTCTGGGCCTTTGCACTGGCTCATGAGGCGCAGGGTTCCTaGGGGCTGGATCATGTCTCT +
Preference number: 4 (lower is better)
Translates to: EGSQEKGTAYLWAFALAHEAQGS*GLDHVS
Trigger: AGAGACATGATCCAGCCCCCAGGAACCCTGCGCCTC...ATGAGCCAGTGCAAAGGCCCAGAGGTAGGCTGTTCCCTTTTCCTGGGACCCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000591812.2
ENST00000635542.2
CDS-3UTR CCA 90 bp CCCTGTTCCTCAAGCAAGATGCCAGACGTACCTGGGTCAGTCCAGACTCCTGACCCTCTTCCAGTAGGCTaGCGAGAGCCGGCCCAGGAT +
Preference number: 4 (lower is better)
Translates to: PCSSSKMPDVPGSVQTPDPLPVG*REPAQD
Trigger: ATCCTGGGCCGGCTCTCGCCAGCCTACTGGAAGAGG...GTCAGGAGTCTGGACTGACCCAGGTACGTCTGGCATCTTGCTTGAGGAACAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000591812.2
ENST00000635542.2
CDS-3UTR CCA 90 bp TCAGTCCAGACTCCTGACCTATGTGGTTTAGGAGCAGCAAGGAGGAGGGAGGGGCCTCTTCCAGTAGGCTaGCGAGAGCCGGCCCAGGAT +
Preference number: 4 (lower is better)
Translates to: SVQTPDLCGLGAARRREGPLPVG*REPAQD
Trigger: ATCCTGGGCCGGCTCTCGCCAGCCTACTGGAAGAGG...CCCCTCCCTCCTCCTTGCTGCTCCTAAACCACATAGGTCAGGAGTCTGGACTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000591812.2
ENST00000635542.2
CDS-3UTR CCA 90 bp CAGCCTACCTCTGGGCCTTTGCACTGGCTCATCCTGCTTCTCGGAATGCTCTTCGATCCTCGTCCTTCTTaGGGAGCCCAGGACCCCTGC +
Preference number: 4 (lower is better)
Translates to: QPTSGPLHWLILLLGMLFDPRPS*GAQDPC
Trigger: GCAGGGGTCCTGGGCTCCCCAAGAAGGACGAGGATC...GAAGAGCATTCCGAGAAGCAGGATGAGCCAGTGCAAAGGCCCAGAGGTAGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000591812.2
ENST00000635542.2
CDS-3UTR CCA 90 bp GCTCATCCTGCTTCTCGGAATGCTCTTCCTAATACCCACTCTGCTCCTCCCTTCTGCGCAAGGCGCTCGTaGATGCGGCTCCGCAAGGCG +
Preference number: 4 (lower is better)
Translates to: AHPASRNALPNTHSAPPFCARRS*MRLRKA
Trigger: CGCCTTGCGGAGCCGCATCCACGAGCGCCTTGCGCA...GAAGGGAGGAGCAGAGTGGGTATTAGGAAGAGCATTCCGAGAAGCAGGATGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000591812.2
ENST00000635542.2
CDS-3UTR CCA 90 bp CAAGCAAGATGCCAGACGTACCTGGGTCAGTCCAGACTCCTGACCTATGTGGTTTGCGCAAGGCGCTCGTaGATGCGGCTCCGCAAGGCG +
Preference number: 4 (lower is better)
Translates to: QARCQTYLGQSRLLTYVVCARRS*MRLRKA
Trigger: CGCCTTGCGGAGCCGCATCCACGAGCGCCTTGCGCA...AACCACATAGGTCAGGAGTCTGGACTGACCCAGGTACGTCTGGCATCTTGCTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000591812.2
ENST00000635542.2
CDS-3UTR CCA 90 bp TCAGTCCAGACTCCTGACCTATGTGGTTTAGGAGCAGCAAGGAGGAGGGAGGGGGGGAGAGGTGGGAGCTaGGTCAGAAGGGCACCAGGT +
Preference number: 4 (lower is better)
Translates to: SVQTPDLCGLGAARRREGGRGGS*VRRAPG
Trigger: ACCTGGTGCCCTTCTGACCCAGCTCCCACCTCTCCC...CCCCTCCCTCCTCCTTGCTGCTCCTAAACCACATAGGTCAGGAGTCTGGACTGA
60% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000593424.5
ENST00000634655.1
CDS-3UTR TCA 90 bp GCTCATCCTGCTTCTCGGAATGCTCTTCCTAATACCCACTCTGCTCCTCCCTTCGTGGCTCTAGGGTGCTaGGGACCCCTAGAGGGGTCC +
Preference number: 4 (lower is better)
Translates to: AHPASRNALPNTHSAPPFVALGC*GPLEGS
Trigger: GGACCCCTCTAGGGGTCCTCAGCACCCTAGAGCCAC...GAAGGGAGGAGCAGAGTGGGTATTAGGAAGAGCATTCCGAGAAGCAGGATGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000591812.2
ENST00000635542.2
CDS-3UTR TCA 90 bp CAGCCTACCTCTGGGCCTTTGCACTGGCTCATCCTGCTTCTCGGAATGCTCTTCTCTGGCTCTGTTTCTTaGGGGGTCTGCTCCCTCCCC +
Preference number: 4 (lower is better)
Translates to: QPTSGPLHWLILLLGMLFSGSVS*GVCSLP
Trigger: GGGGAGGGAGCAGACCCCTCAAGAAACAGAGCCAGA...GAAGAGCATTCCGAGAAGCAGGATGAGCCAGTGCAAAGGCCCAGAGGTAGGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000591812.2
ENST00000635542.2
CDS-3UTR TCA 90 bp GGGGTCCCAGGAAAAGGGAACAGCCTACCTCTGGGCCTTTGCACTGGCTCATCCACCAGAGACTGGACGTaGATGGTGAGCACGTCCTCA +
Preference number: 4 (lower is better)
Translates to: GVPGKGNSLPLGLCTGSSTRDWT*MVSTSS
Trigger: TGAGGACGTGCTCACCATTCACGTCCAGTCTCTGGT...GGATGAGCCAGTGCAAAGGCCCAGAGGTAGGCTGTTCCCTTTTCCTGGGACCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000591812.2
ENST00000635542.2
CDS-3UTR TCA 90 bp CAAGCAAGATGCCAGACGTACCTGGGTCAGTCCAGACTCCTGACCTATGTGGTTGGGACCCCCAGAATCTaGGGCGATGCGCACCCGAAG +
Preference number: 4 (lower is better)
Translates to: QARCQTYLGQSRLLTYVVGTPRI*GDAHPK
Trigger: CTTCGGGTGCGCATCGCCTCAGATTCTGGGGGTCCC...AACCACATAGGTCAGGAGTCTGGACTGACCCAGGTACGTCTGGCATCTTGCTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000591812.2
ENST00000635542.2
CDS-3UTR TCA 90 bp CAAGCAAGATGCCAGACGTACCTGGGTCAGTCCAGACTCCTGACCTATGTGGTTTGTCCGGGCTCCAGATaGGTTCCTCGGTCAGCGCCG +
Preference number: 4 (lower is better)
Translates to: QARCQTYLGQSRLLTYVVCPGSR*VPRSAP
Trigger: CGGCGCTGACCGAGGAACTCATCTGGAGCCCGGACA...AACCACATAGGTCAGGAGTCTGGACTGACCCAGGTACGTCTGGCATCTTGCTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000591812.2
ENST00000593424.5
ENST00000634655.1
ENST00000635542.2
CDS-3UTR TCA 90 bp CAGCCTACCTCTGGGCCTTTGCACTGGCTCATCCTGCTTCTCGGAATGCTCTTCGCCTGGGCTCTGGGATaGTCCTTTCTGTGCAGCGTC +
Preference number: 4 (lower is better)
Translates to: QPTSGPLHWLILLLGMLFAWALG*SFLCSV
Trigger: GACGCTGCACAGAAAGGATCATCCCAGAGCCCAGGC...GAAGAGCATTCCGAGAAGCAGGATGAGCCAGTGCAAAGGCCCAGAGGTAGGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000591812.2
ENST00000635542.2
CDS-3UTR TCA 90 bp CCCAGGAAAAGGGAACAGCCTACCTCTGGGCCTTTGCACTGGCTCATCCTGCTTGGCAGGGGGCTTGTTTaGGCCAGGAGGTTAAGGCTG +
Preference number: 4 (lower is better)
Translates to: PRKREQPTSGPLHWLILLGRGLV*ARRLRL
Trigger: CAGCCTTAACCTCCTGGCTCAAACAAGCCCCCTGCC...AAGCAGGATGAGCCAGTGCAAAGGCCCAGAGGTAGGCTGTTCCCTTTTCCTGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000591812.2
ENST00000593424.5
ENST00000634655.1
ENST00000635542.2
CDS-3UTR TCA 90 bp TCAGTCCAGACTCCTGACCTATGTGGTTTAGGAGCAGCAAGGAGGAGGGAGGGGGGCAGGGGGCTTGTTTaGGCCAGGAGGTTAAGGCTG +
Preference number: 4 (lower is better)
Translates to: SVQTPDLCGLGAARRREGGRGLV*ARRLRL
Trigger: CAGCCTTAACCTCCTGGCTCAAACAAGCCCCCTGCC...CCCCTCCCTCCTCCTTGCTGCTCCTAAACCACATAGGTCAGGAGTCTGGACTGA
59% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000591812.2
ENST00000593424.5
ENST00000634655.1
ENST00000635542.2
CDS-3UTR GCA 90 bp GGGGTCCCAGGAAAAGGGAACAGCCTACCTCTGGGCCTTTGCACTGGCTCATCCGGGCCATCGTCAGGTTaGAGGAAGCCAGTGAGTCAT +
Preference number: 4 (lower is better)
Translates to: GVPGKGNSLPLGLCTGSSGPSSG*RKPVSH
Trigger: ATGACTCACTGGCTTCCTGCAACCTGACGATGGCCC...GGATGAGCCAGTGCAAAGGCCCAGAGGTAGGCTGTTCCCTTTTCCTGGGACCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000591812.2
ENST00000635542.2
CDS-3UTR GCA 90 bp GCTCATCCTGCTTCTCGGAATGCTCTTCCTAATACCCACTCTGCTCCTCCCTTCCCGGTGCTCGGAGTGTaGGGAGTCGTGTCCACAGGG +
Preference number: 4 (lower is better)
Translates to: AHPASRNALPNTHSAPPFPVLGV*GVVSTG
Trigger: CCCTGTGGACACGACTCCGCACACTCCGAGCACCGG...GAAGGGAGGAGCAGAGTGGGTATTAGGAAGAGCATTCCGAGAAGCAGGATGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000591812.2
ENST00000635542.2
CDS-3UTR GCA 90 bp CAAGCAAGATGCCAGACGTACCTGGGTCAGTCCAGACTCCTGACCTATGTGGTTCCGGTGCTCGGAGTGTaGGGAGTCGTGTCCACAGGG +
Preference number: 4 (lower is better)
Translates to: QARCQTYLGQSRLLTYVVPVLGV*GVVSTG
Trigger: CCCTGTGGACACGACTCCGCACACTCCGAGCACCGG...AACCACATAGGTCAGGAGTCTGGACTGACCCAGGTACGTCTGGCATCTTGCTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000591812.2
ENST00000635542.2
CDS-3UTR GCA 90 bp GAGGGGTCCCAGGAAAAGGGAACAGCCTACCTCTGGGCCTTTGCACTGGCTCATAACTCTACGTCCAGCTaGGTGTCCCCAATGTCCGGG +
Preference number: 4 (lower is better)
Translates to: EGSQEKGTAYLWAFALAHNSTSS*VSPMSG
Trigger: CCCGGACATTGGGGACACGCAGCTGGACGTAGAGTT...ATGAGCCAGTGCAAAGGCCCAGAGGTAGGCTGTTCCCTTTTCCTGGGACCCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000591812.2
ENST00000593424.5
ENST00000634655.1
ENST00000635542.2
CDS-3UTR GCA 90 bp GAGGGGTCCCAGGAAAAGGGAACAGCCTACCTCTGGGCCTTTGCACTGGCTCATTTGCCCAGGCTGGAGTaGAATGGCGCAATCTCCGCT +
Preference number: 4 (lower is better)
Translates to: EGSQEKGTAYLWAFALAHLPRLE*NGAISA
Trigger: AGCGGAGATTGCGCCATTGCACTCCAGCCTGGGCAA...ATGAGCCAGTGCAAAGGCCCAGAGGTAGGCTGTTCCCTTTTCCTGGGACCCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000591812.2
ENST00000593424.5
ENST00000634655.1
ENST00000635542.2
CDS-3UTR CCA 90 bp TCAGTCCAGACTCCTGACCTATGTGGTTTAGGAGCAGCAAGGAGGAGGGAGGGGGCCTCACCCCCTCTGTaGGGACTTCAGGTGCCTTGT +
Preference number: 4 (lower is better)
Translates to: SVQTPDLCGLGAARRREGASPPL*GLQVPC
Trigger: ACAAGGCACCTGAAGTCCCCACAGAGGGGGTGAGGC...CCCCTCCCTCCTCCTTGCTGCTCCTAAACCACATAGGTCAGGAGTCTGGACTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000591812.2
ENST00000635542.2
CDS-3UTR CCA 90 bp TCAGTCCAGACTCCTGACCTATGTGGTTTAGGAGCAGCAAGGAGGAGGGAGGGGAGGGCCTCCGCATCCTaGGTATCCAGCTCTGGCACA +
Preference number: 4 (lower is better)
Translates to: SVQTPDLCGLGAARRREGRASAS*VSSSGT
Trigger: TGTGCCAGAGCTGGATACCCAGGATGCGGAGGCCCT...CCCCTCCCTCCTCCTTGCTGCTCCTAAACCACATAGGTCAGGAGTCTGGACTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000591812.2
ENST00000635542.2
CDS-3UTR CCA 90 bp CCCAGGAAAAGGGAACAGCCTACCTCTGGGCCTTTGCACTGGCTCATCCTGCTTCCTGGGGTGTCCTGTTaGACCCTGCCGATCTGCACA +
Preference number: 4 (lower is better)
Translates to: PRKREQPTSGPLHWLILLPGVSC*TLPICT
Trigger: TGTGCAGATCGGCAGGGTCCAACAGGACACCCCAGG...AAGCAGGATGAGCCAGTGCAAAGGCCCAGAGGTAGGCTGTTCCCTTTTCCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000591812.2
ENST00000635542.2
CDS-3UTR CCA 90 bp GAGGGGTCCCAGGAAAAGGGAACAGCCTACCTCTGGGCCTTTGCACTGGCTCATGGAAAGCACCTTCCCTaGGGTGTCCTGTTGGACCCT +
Preference number: 4 (lower is better)
Translates to: EGSQEKGTAYLWAFALAHGKHLP*GVLLDP
Trigger: AGGGTCCAACAGGACACCCCAGGGAAGGTGCTTTCC...ATGAGCCAGTGCAAAGGCCCAGAGGTAGGCTGTTCCCTTTTCCTGGGACCCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000591812.2
ENST00000635542.2
CDS-3UTR CCA 90 bp CCCTGTTCCTCAAGCAAGATGCCAGACGTACCTGGGTCAGTCCAGACTCCTGACGAGGCGCAGGGTTCCTaGGGGCTGGATCATGTCTCT +
Preference number: 4 (lower is better)
Translates to: PCSSSKMPDVPGSVQTPDEAQGS*GLDHVS
Trigger: AGAGACATGATCCAGCCCCCAGGAACCCTGCGCCTC...GTCAGGAGTCTGGACTGACCCAGGTACGTCTGGCATCTTGCTTGAGGAACAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000591812.2
ENST00000635542.2
CDS-3UTR CCA 90 bp GCTCATCCTGCTTCTCGGAATGCTCTTCCTAATACCCACTCTGCTCCTCCCTTCCTCCAGCGCGGGGCCTaGATCCTCGTCCTTCTTGGG +
Preference number: 4 (lower is better)
Translates to: AHPASRNALPNTHSAPPFLQRGA*ILVLLG
Trigger: CCCAAGAAGGACGAGGATCCAGGCCCCGCGCTGGAG...GAAGGGAGGAGCAGAGTGGGTATTAGGAAGAGCATTCCGAGAAGCAGGATGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000591812.2
ENST00000635542.2
CDS-3UTR CCA 90 bp TGTTCCTCAAGCAAGATGCCAGACGTACCTGGGTCAGTCCAGACTCCTGACCTACTCCAGCGCGGGGCCTaGATCCTCGTCCTTCTTGGG +
Preference number: 4 (lower is better)
Translates to: CSSSKMPDVPGSVQTPDLLQRGA*ILVLLG
Trigger: CCCAAGAAGGACGAGGATCCAGGCCCCGCGCTGGAG...TAGGTCAGGAGTCTGGACTGACCCAGGTACGTCTGGCATCTTGCTTGAGGAACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000591812.2
ENST00000635542.2
CDS-3UTR CCA 90 bp CAAGCAAGATGCCAGACGTACCTGGGTCAGTCCAGACTCCTGACCTATGTGGTTGCCCCCAGGGGATCTTaGTTCTCGCCTCGAGCCAGG +
Preference number: 4 (lower is better)
Translates to: QARCQTYLGQSRLLTYVVAPRGS*FSPRAR
Trigger: CCTGGCTCGAGGCGAGAACCAAGATCCCCTGGGGGC...AACCACATAGGTCAGGAGTCTGGACTGACCCAGGTACGTCTGGCATCTTGCTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000591812.2
ENST00000593424.5
ENST00000634655.1
ENST00000635542.2
CDS-3UTR CCA 90 bp TGTTCCTCAAGCAAGATGCCAGACGTACCTGGGTCAGTCCAGACTCCTGACCTAGCCCCCAGGGGATCTTaGTTCTCGCCTCGAGCCAGG +
Preference number: 4 (lower is better)
Translates to: CSSSKMPDVPGSVQTPDLAPRGS*FSPRAR
Trigger: CCTGGCTCGAGGCGAGAACCAAGATCCCCTGGGGGC...TAGGTCAGGAGTCTGGACTGACCCAGGTACGTCTGGCATCTTGCTTGAGGAACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000591812.2
ENST00000593424.5
ENST00000634655.1
ENST00000635542.2
CDS-3UTR CCA 90 bp TCAGTCCAGACTCCTGACCTATGTGGTTTAGGAGCAGCAAGGAGGAGGGAGGGGGCGCCCCAAACCACGTaGTCAGGTAGTACCCAGCCT +
Preference number: 4 (lower is better)
Translates to: SVQTPDLCGLGAARRREGAPQTT*SGSTQP
Trigger: AGGCTGGGTACTACCTGACCACGTGGTTTGGGGCGC...CCCCTCCCTCCTCCTTGCTGCTCCTAAACCACATAGGTCAGGAGTCTGGACTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000591812.2
ENST00000593424.5
ENST00000634655.1
ENST00000635542.2
CDS-3UTR CCA 90 bp GGGGTCCCAGGAAAAGGGAACAGCCTACCTCTGGGCCTTTGCACTGGCTCATCCTCTGGGCCTTTGCACTaGCTCATCCTGCTTCTCGGA +
Preference number: 4 (lower is better)
Translates to: GVPGKGNSLPLGLCTGSSSGPLH*LILLLG
Trigger: TCCGAGAAGCAGGATGAGCCAGTGCAAAGGCCCAGA...GGATGAGCCAGTGCAAAGGCCCAGAGGTAGGCTGTTCCCTTTTCCTGGGACCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000591812.2
ENST00000593424.5
ENST00000634655.1
ENST00000635542.2
CDS-3UTR CCA 90 bp GAGGGGTCCCAGGAAAAGGGAACAGCCTACCTCTGGGCCTTTGCACTGGCTCATCTACTTGCAGCCAGATaGGCAGTCACCTGGGCTCTG +
Preference number: 4 (lower is better)
Translates to: EGSQEKGTAYLWAFALAHLLAAR*AVTWAL
Trigger: CAGAGCCCAGGTGACTGCCCATCTGGCTGCAAGTAG...ATGAGCCAGTGCAAAGGCCCAGAGGTAGGCTGTTCCCTTTTCCTGGGACCCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000593424.5
ENST00000634655.1
CDS-3UTR TCA 90 bp GTCACCTCAGTGAGGCTTTCTCTGATACGCCTGTCTAAAACTGCAAAGCCTCCTGGTCCACTTCCGGGCTaGGCGGGCCTTTCACCCAGG +
Preference number: 4 (lower is better)
Translates to: VTSVRLSLIRLSKTAKPPGPLPG*AGLSPR
Trigger: CCTGGGTGAAAGGCCCGCTCAGCCCGGAAGTGGACC...AGGAGGCTTTGCAGTTTTAGACAGGCGTATCAGAGAAAGCCTCACTGAGGTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000591812.2
ENST00000635542.2
CDS-3UTR TCA 90 bp GAGGGGTCCCAGGAAAAGGGAACAGCCTACCTCTGGGCCTTTGCACTGGCTCATACCAGAGACTGGACGTaGATGGTGAGCACGTCCTCA +
Preference number: 4 (lower is better)
Translates to: EGSQEKGTAYLWAFALAHTRDWT*MVSTSS
Trigger: TGAGGACGTGCTCACCATTCACGTCCAGTCTCTGGT...ATGAGCCAGTGCAAAGGCCCAGAGGTAGGCTGTTCCCTTTTCCTGGGACCCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000591812.2
ENST00000635542.2
CDS-3UTR TCA 90 bp GTCACCTCAGTGAGGCTTTCTCTGATACGCCTGTCTAAAACTGCAAAGCCTCCTAGGTGCCGCACATCCTaGAGCAGCTCCGTGGCCGGG +
Preference number: 4 (lower is better)
Translates to: VTSVRLSLIRLSKTAKPPRCRTS*SSSVAG
Trigger: CCCGGCCACGGAGCTGCTTCAGGATGTGCGGCACCT...AGGAGGCTTTGCAGTTTTAGACAGGCGTATCAGAGAAAGCCTCACTGAGGTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000591812.2
ENST00000635542.2
CDS-3UTR TCA 90 bp GGGGTCCCAGGAAAAGGGAACAGCCTACCTCTGGGCCTTTGCACTGGCTCATCCAACTGCAAAGCCTCCTaGGTAGCTGGTACCACAGGA +
Preference number: 4 (lower is better)
Translates to: GVPGKGNSLPLGLCTGSSNCKAS*VAGTTG
Trigger: TCCTGTGGTACCAGCTACTCAGGAGGCTTTGCAGTT...GGATGAGCCAGTGCAAAGGCCCAGAGGTAGGCTGTTCCCTTTTCCTGGGACCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000591812.2
ENST00000593424.5
ENST00000634655.1
ENST00000635542.2
CDS-3UTR GCA 90 bp TCAGTCCAGACTCCTGACCTATGTGGTTTAGGAGCAGCAAGGAGGAGGGAGGGGCTCGGAGGAGAGGCCTaGAGTAGCAGGAAGTGGAGA +
Preference number: 4 (lower is better)
Translates to: SVQTPDLCGLGAARRREGLGGEA*SSRKWR
Trigger: TCTCCACTTCCTGCTACTGCAGGCCTCTCCTCCGAG...CCCCTCCCTCCTCCTTGCTGCTCCTAAACCACATAGGTCAGGAGTCTGGACTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000591812.2
ENST00000635542.2
CDS-3UTR GCA 90 bp CCCAGGAAAAGGGAACAGCCTACCTCTGGGCCTTTGCACTGGCTCATCCTGCTTCTCGGAGGAGAGGCCTaGAGTAGCAGGAAGTGGAGA +
Preference number: 4 (lower is better)
Translates to: PRKREQPTSGPLHWLILLLGGEA*SSRKWR
Trigger: TCTCCACTTCCTGCTACTGCAGGCCTCTCCTCCGAG...AAGCAGGATGAGCCAGTGCAAAGGCCCAGAGGTAGGCTGTTCCCTTTTCCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000591812.2
ENST00000635542.2
CDS-3UTR GCA 90 bp CCCTGTTCCTCAAGCAAGATGCCAGACGTACCTGGGTCAGTCCAGACTCCTGACCAGAATCTGAGGCGATaGGCACCCGAAGGCTTCGGT +
Preference number: 4 (lower is better)
Translates to: PCSSSKMPDVPGSVQTPDQNLRR*APEGFG
Trigger: ACCGAAGCCTTCGGGTGCGCATCGCCTCAGATTCTG...GTCAGGAGTCTGGACTGACCCAGGTACGTCTGGCATCTTGCTTGAGGAACAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000591812.2
ENST00000635542.2
CDS-3UTR GCA 90 bp GAGGGGTCCCAGGAAAAGGGAACAGCCTACCTCTGGGCCTTTGCACTGGCTCATCCGCATAGACATCTCTaGACACCTCCAAGAGGAGCG +
Preference number: 4 (lower is better)
Translates to: EGSQEKGTAYLWAFALAHPHRHL*TPPRGA
Trigger: CGCTCCTCTTGGAGGTGTGCAGAGATGTCTATGCGG...ATGAGCCAGTGCAAAGGCCCAGAGGTAGGCTGTTCCCTTTTCCTGGGACCCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000591812.2
ENST00000593424.5
ENST00000634655.1
ENST00000635542.2
CDS-3UTR GCA 90 bp GTCACCTCAGTGAGGCTTTCTCTGATACGCCTGTCTAAAACTGCAAAGCCTCCTTGTGCAGCGTCCGCCTaGGGTGCCACTGGTGCAGGG +
Preference number: 4 (lower is better)
Translates to: VTSVRLSLIRLSKTAKPPCAASA*GATGAG
Trigger: CCCTGCACCAGTGGCACCGCAGGCGGACGCTGCACA...AGGAGGCTTTGCAGTTTTAGACAGGCGTATCAGAGAAAGCCTCACTGAGGTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000591812.2
ENST00000593424.5
ENST00000634655.1
ENST00000635542.2
CDS-3UTR GCA 90 bp GGGGTCCCAGGAAAAGGGAACAGCCTACCTCTGGGCCTTTGCACTGGCTCATCCGTTCCTCAAGCAAGATaGCAGACGTACCTGGGTCAG +
Preference number: 4 (lower is better)
Translates to: GVPGKGNSLPLGLCTGSSVPQAR*QTYLGQ
Trigger: CTGACCCAGGTACGTCTGGCATCTTGCTTGAGGAAC...GGATGAGCCAGTGCAAAGGCCCAGAGGTAGGCTGTTCCCTTTTCCTGGGACCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000591812.2
ENST00000593424.5
ENST00000634655.1
ENST00000635542.2
CDS-3UTR GCA 90 bp TCAGTCCAGACTCCTGACCTATGTGGTTTAGGAGCAGCAAGGAGGAGGGAGGGGTTGCCCAGGCTGGAGTaGAATGGCGCAATCTCCGCT +
Preference number: 4 (lower is better)
Translates to: SVQTPDLCGLGAARRREGLPRLE*NGAISA
Trigger: AGCGGAGATTGCGCCATTGCACTCCAGCCTGGGCAA...CCCCTCCCTCCTCCTTGCTGCTCCTAAACCACATAGGTCAGGAGTCTGGACTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000591812.2
ENST00000593424.5
ENST00000634655.1
ENST00000635542.2
CDS-3UTR CCA 90 bp CAAGCAAGATGCCAGACGTACCTGGGTCAGTCCAGACTCCTGACCTATGTGGTTCTCAACACCAGGGCCTaGCTGGGGTCACGTCCTGTG +
Preference number: 4 (lower is better)
Translates to: QARCQTYLGQSRLLTYVVLNTRA*LGSRPV
Trigger: CACAGGACGTGACCCCAGCCAGGCCCTGGTGTTGAG...AACCACATAGGTCAGGAGTCTGGACTGACCCAGGTACGTCTGGCATCTTGCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000591812.2
ENST00000635542.2
CDS-3UTR CCA 90 bp TCAGTCCAGACTCCTGACCTATGTGGTTTAGGAGCAGCAAGGAGGAGGGAGGGGGCAAGAGCAGGGTTCTaGGCAGAACATCCCTGCTGG +
Preference number: 4 (lower is better)
Translates to: SVQTPDLCGLGAARRREGARAGF*AEHPCW
Trigger: CCAGCAGGGATGTTCTGCCCAGAACCCTGCTCTTGC...CCCCTCCCTCCTCCTTGCTGCTCCTAAACCACATAGGTCAGGAGTCTGGACTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000591812.2
ENST00000635542.2
CDS-3UTR CCA 90 bp CCCAGGAAAAGGGAACAGCCTACCTCTGGGCCTTTGCACTGGCTCATCCTGCTTCTGTGTGTTCATCTCTaGGCCCTAGAGTGGGAGGGG +
Preference number: 4 (lower is better)
Translates to: PRKREQPTSGPLHWLILLLCVHL*ALEWEG
Trigger: CCCCTCCCACTCTAGGGCCCAGAGATGAACACACAG...AAGCAGGATGAGCCAGTGCAAAGGCCCAGAGGTAGGCTGTTCCCTTTTCCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000591812.2
ENST00000635542.2
CDS-3UTR CCA 90 bp CCCTGTTCCTCAAGCAAGATGCCAGACGTACCTGGGTCAGTCCAGACTCCTGACAGGGTTCCTGGGGGCTaGATCATGTCTCTGAGCAGC +
Preference number: 4 (lower is better)
Translates to: PCSSSKMPDVPGSVQTPDRVPGG*IMSLSS
Trigger: GCTGCTCAGAGACATGATCCAGCCCCCAGGAACCCT...GTCAGGAGTCTGGACTGACCCAGGTACGTCTGGCATCTTGCTTGAGGAACAGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000591812.2
ENST00000635542.2
CDS-3UTR CCA 90 bp GTCACCTCAGTGAGGCTTTCTCTGATACGCCTGTCTAAAACTGCAAAGCCTCCTCCTGAAGCAGCTCCGTaGCCGGGTCCCCAGACCCGT +
Preference number: 4 (lower is better)
Translates to: VTSVRLSLIRLSKTAKPPPEAAP*PGPQTR
Trigger: ACGGGTCTGGGGACCCGGCCACGGAGCTGCTTCAGG...AGGAGGCTTTGCAGTTTTAGACAGGCGTATCAGAGAAAGCCTCACTGAGGTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000591812.2
ENST00000635542.2
CDS-3UTR CCA 90 bp CAAGCAAGATGCCAGACGTACCTGGGTCAGTCCAGACTCCTGACCTATGTGGTTGATCCTCGTCCTTCTTaGGGAGCCCAGGACCCCTGC +
Preference number: 4 (lower is better)
Translates to: QARCQTYLGQSRLLTYVVDPRPS*GAQDPC
Trigger: GCAGGGGTCCTGGGCTCCCCAAGAAGGACGAGGATC...AACCACATAGGTCAGGAGTCTGGACTGACCCAGGTACGTCTGGCATCTTGCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000591812.2
ENST00000635542.2
CDS-3UTR CCA 90 bp GGGGTCCCAGGAAAAGGGAACAGCCTACCTCTGGGCCTTTGCACTGGCTCATCCCAGTCACCTGGGCTCTaGGATGATCCTTTCTGTGCA +
Preference number: 4 (lower is better)
Translates to: GVPGKGNSLPLGLCTGSSQSPGL*DDPFCA
Trigger: TGCACAGAAAGGATCATCCCAGAGCCCAGGTGACTG...GGATGAGCCAGTGCAAAGGCCCAGAGGTAGGCTGTTCCCTTTTCCTGGGACCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000593424.5
ENST00000634655.1
CDS-3UTR CCA 90 bp CCCTGTTCCTCAAGCAAGATGCCAGACGTACCTGGGTCAGTCCAGACTCCTGACCTACTTGCAGCCAGATaGGCAGTCACCTGGGCTCTG +
Preference number: 4 (lower is better)
Translates to: PCSSSKMPDVPGSVQTPDLLAAR*AVTWAL
Trigger: CAGAGCCCAGGTGACTGCCCATCTGGCTGCAAGTAG...GTCAGGAGTCTGGACTGACCCAGGTACGTCTGGCATCTTGCTTGAGGAACAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000593424.5
ENST00000634655.1
CDS-3UTR TCA 90 bp CAGCCTACCTCTGGGCCTTTGCACTGGCTCATCCTGCTTCTCGGAATGCTCTTCTGGGGTCACGTCCTGTaGCCAAGAAACTCCCTAGTG +
Preference number: 4 (lower is better)
Translates to: QPTSGPLHWLILLLGMLFWGHVL*PRNSLV
Trigger: CACTAGGGAGTTTCTTGGTCACAGGACGTGACCCCA...GAAGAGCATTCCGAGAAGCAGGATGAGCCAGTGCAAAGGCCCAGAGGTAGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000591812.2
ENST00000635542.2
CDS-3UTR TCA 90 bp CCCTGTTCCTCAAGCAAGATGCCAGACGTACCTGGGTCAGTCCAGACTCCTGACTGGGGTCACGTCCTGTaGCCAAGAAACTCCCTAGTG +
Preference number: 4 (lower is better)
Translates to: PCSSSKMPDVPGSVQTPDWGHVL*PRNSLV
Trigger: CACTAGGGAGTTTCTTGGTCACAGGACGTGACCCCA...GTCAGGAGTCTGGACTGACCCAGGTACGTCTGGCATCTTGCTTGAGGAACAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000591812.2
ENST00000635542.2
CDS-3UTR TCA 90 bp GCTCATCCTGCTTCTCGGAATGCTCTTCCTAATACCCACTCTGCTCCTCCCTTCTCTGGCTCTGTTTCTTaGGGGGTCTGCTCCCTCCCC +
Preference number: 4 (lower is better)
Translates to: AHPASRNALPNTHSAPPFSGSVS*GVCSLP
Trigger: GGGGAGGGAGCAGACCCCTCAAGAAACAGAGCCAGA...GAAGGGAGGAGCAGAGTGGGTATTAGGAAGAGCATTCCGAGAAGCAGGATGAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000591812.2
ENST00000635542.2
CDS-3UTR TCA 90 bp CAGCCTACCTCTGGGCCTTTGCACTGGCTCATCCTGCTTCTCGGAATGCTCTTCGCTGGATCATGTCTCTaGGCAGCCTCTGGCTCTGTT +
Preference number: 4 (lower is better)
Translates to: QPTSGPLHWLILLLGMLFAGSCL*AASGSV
Trigger: AACAGAGCCAGAGGCTGCTCAGAGACATGATCCAGC...GAAGAGCATTCCGAGAAGCAGGATGAGCCAGTGCAAAGGCCCAGAGGTAGGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000591812.2
ENST00000635542.2
CDS-3UTR TCA 90 bp CCCTGTTCCTCAAGCAAGATGCCAGACGTACCTGGGTCAGTCCAGACTCCTGACGAGTCCTTTGCCAGGTaGTCCTGGAGGTCAGTAAGG +
Preference number: 4 (lower is better)
Translates to: PCSSSKMPDVPGSVQTPDESFAR*SWRSVR
Trigger: CCTTACTGACCTCCAGGATCACCTGGCAAAGGACTC...GTCAGGAGTCTGGACTGACCCAGGTACGTCTGGCATCTTGCTTGAGGAACAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000591812.2
ENST00000635542.2
CDS-3UTR TCA 90 bp CAGCCTACCTCTGGGCCTTTGCACTGGCTCATCCTGCTTCTCGGAATGCTCTTCGAGTCCTTTGCCAGGTaGTCCTGGAGGTCAGTAAGG +
Preference number: 4 (lower is better)
Translates to: QPTSGPLHWLILLLGMLFESFAR*SWRSVR
Trigger: CCTTACTGACCTCCAGGATCACCTGGCAAAGGACTC...GAAGAGCATTCCGAGAAGCAGGATGAGCCAGTGCAAAGGCCCAGAGGTAGGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000591812.2
ENST00000635542.2
CDS-3UTR TCA 90 bp GTCACCTCAGTGAGGCTTTCTCTGATACGCCTGTCTAAAACTGCAAAGCCTCCTTGTCCGGGCTCCAGATaGGTTCCTCGGTCAGCGCCG +
Preference number: 4 (lower is better)
Translates to: VTSVRLSLIRLSKTAKPPCPGSR*VPRSAP
Trigger: CGGCGCTGACCGAGGAACTCATCTGGAGCCCGGACA...AGGAGGCTTTGCAGTTTTAGACAGGCGTATCAGAGAAAGCCTCACTGAGGTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000591812.2
ENST00000593424.5
ENST00000634655.1
ENST00000635542.2
CDS-3UTR TCA 90 bp CAAGCAAGATGCCAGACGTACCTGGGTCAGTCCAGACTCCTGACCTATGTGGTTGCCTGGGCTCTGGGATaGTCCTTTCTGTGCAGCGTC +
Preference number: 4 (lower is better)
Translates to: QARCQTYLGQSRLLTYVVAWALG*SFLCSV
Trigger: GACGCTGCACAGAAAGGATCATCCCAGAGCCCAGGC...AACCACATAGGTCAGGAGTCTGGACTGACCCAGGTACGTCTGGCATCTTGCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000591812.2
ENST00000635542.2
CDS-3UTR TCA 90 bp CAAGCAAGATGCCAGACGTACCTGGGTCAGTCCAGACTCCTGACCTATGTGGTTGGCAGGGGGCTTGTTTaGGCCAGGAGGTTAAGGCTG +
Preference number: 4 (lower is better)
Translates to: QARCQTYLGQSRLLTYVVGRGLV*ARRLRL
Trigger: CAGCCTTAACCTCCTGGCTCAAACAAGCCCCCTGCC...AACCACATAGGTCAGGAGTCTGGACTGACCCAGGTACGTCTGGCATCTTGCTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000591812.2
ENST00000593424.5
ENST00000634655.1
ENST00000635542.2
CDS-3UTR GCA 90 bp CCCAGGAAAAGGGAACAGCCTACCTCTGGGCCTTTGCACTGGCTCATCCTGCTTGGGCCATCGTCAGGTTaGAGGAAGCCAGTGAGTCAT +
Preference number: 4 (lower is better)
Translates to: PRKREQPTSGPLHWLILLGPSSG*RKPVSH
Trigger: ATGACTCACTGGCTTCCTGCAACCTGACGATGGCCC...AAGCAGGATGAGCCAGTGCAAAGGCCCAGAGGTAGGCTGTTCCCTTTTCCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000591812.2
ENST00000635542.2
CDS-3UTR GCA 90 bp GAGGGGTCCCAGGAAAAGGGAACAGCCTACCTCTGGGCCTTTGCACTGGCTCATTGGGCAGAACATCCCTaGTGGCTGATAGAAAGGCCA +
Preference number: 4 (lower is better)
Translates to: EGSQEKGTAYLWAFALAHWAEHP*WLIERP
Trigger: TGGCCTTTCTATCAGCCAGCAGGGATGTTCTGCCCA...ATGAGCCAGTGCAAAGGCCCAGAGGTAGGCTGTTCCCTTTTCCTGGGACCCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000591812.2
ENST00000635542.2
CDS-3UTR GCA 90 bp CCCTGTTCCTCAAGCAAGATGCCAGACGTACCTGGGTCAGTCCAGACTCCTGACTGTCCTGTTGGACCCTaGCGATCTGCACAGGATCTG +
Preference number: 4 (lower is better)
Translates to: PCSSSKMPDVPGSVQTPDCPVGP*RSAQDL
Trigger: CAGATCCTGTGCAGATCGGCAGGGTCCAACAGGACA...GTCAGGAGTCTGGACTGACCCAGGTACGTCTGGCATCTTGCTTGAGGAACAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000591812.2
ENST00000635542.2
CDS-3UTR GCA 90 bp CAGCCTACCTCTGGGCCTTTGCACTGGCTCATCCTGCTTCTCGGAATGCTCTTCCCGCATAGACATCTCTaGACACCTCCAAGAGGAGCG +
Preference number: 4 (lower is better)
Translates to: QPTSGPLHWLILLLGMLFPHRHL*TPPRGA
Trigger: CGCTCCTCTTGGAGGTGTGCAGAGATGTCTATGCGG...GAAGAGCATTCCGAGAAGCAGGATGAGCCAGTGCAAAGGCCCAGAGGTAGGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000591812.2
ENST00000593424.5
ENST00000634655.1
ENST00000635542.2
CDS-3UTR GCA 90 bp GGGGTCCCAGGAAAAGGGAACAGCCTACCTCTGGGCCTTTGCACTGGCTCATCCTGTCACAGTCTCTTCTaGCCATGGCTCCTTAAAGGG +
Preference number: 4 (lower is better)
Translates to: GVPGKGNSLPLGLCTGSSCHSLF*PWLLKG
Trigger: CCCTTTAAGGAGCCATGGGCAGAAGAGACTGTGACA...GGATGAGCCAGTGCAAAGGCCCAGAGGTAGGCTGTTCCCTTTTCCTGGGACCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000591812.2
ENST00000593424.5
ENST00000634655.1
ENST00000635542.2
CDS-3UTR GCA 90 bp CCCAGGAAAAGGGAACAGCCTACCTCTGGGCCTTTGCACTGGCTCATCCTGCTTGGGGTCCCACTGTTTTaGCCAGGCTGGTCTCAAACT +
Preference number: 4 (lower is better)
Translates to: PRKREQPTSGPLHWLILLGVPLF*PGWSQT
Trigger: AGTTTGAGACCAGCCTGGGCAAAACAGTGGGACCCC...AAGCAGGATGAGCCAGTGCAAAGGCCCAGAGGTAGGCTGTTCCCTTTTCCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000591812.2
ENST00000593424.5
ENST00000634655.1
ENST00000635542.2
CDS-3UTR GCA 90 bp CCCAGGAAAAGGGAACAGCCTACCTCTGGGCCTTTGCACTGGCTCATCCTGCTTCTACCTCTGGGCCTTTaGACTGGCTCATCCTGCTTC +
Preference number: 4 (lower is better)
Translates to: PRKREQPTSGPLHWLILLLPLGL*TGSSCF
Trigger: GAAGCAGGATGAGCCAGTGCAAAGGCCCAGAGGTAG...AAGCAGGATGAGCCAGTGCAAAGGCCCAGAGGTAGGCTGTTCCCTTTTCCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000591812.2
ENST00000593424.5
ENST00000634655.1
ENST00000635542.2
CDS-3UTR GCA 90 bp TCAGTCCAGACTCCTGACCTATGTGGTTTAGGAGCAGCAAGGAGGAGGGAGGGGCTACCTCTGGGCCTTTaGACTGGCTCATCCTGCTTC +
Preference number: 4 (lower is better)
Translates to: SVQTPDLCGLGAARRREGLPLGL*TGSSCF
Trigger: GAAGCAGGATGAGCCAGTGCAAAGGCCCAGAGGTAG...CCCCTCCCTCCTCCTTGCTGCTCCTAAACCACATAGGTCAGGAGTCTGGACTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000591812.2
ENST00000593424.5
ENST00000634655.1
ENST00000635542.2
CDS-3UTR GCA 90 bp GGGGTCCCAGGAAAAGGGAACAGCCTACCTCTGGGCCTTTGCACTGGCTCATCCAGGCATGCGCCACCATaGCCGGCTAAGTTTGTATTT +
Preference number: 4 (lower is better)
Translates to: GVPGKGNSLPLGLCTGSSRHAPP*PAKFVF
Trigger: AAATACAAACTTAGCCGGGCATGGTGGCGCATGCCT...GGATGAGCCAGTGCAAAGGCCCAGAGGTAGGCTGTTCCCTTTTCCTGGGACCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000591812.2
ENST00000593424.5
ENST00000634655.1
ENST00000635542.2
CDS-3UTR GCA 90 bp CCCAGGAAAAGGGAACAGCCTACCTCTGGGCCTTTGCACTGGCTCATCCTGCTTACCCTCCCTTCTACTTaGAGCCAGATGGGCAGTCAC +
Preference number: 4 (lower is better)
Translates to: PRKREQPTSGPLHWLILLTLPST*SQMGSH
Trigger: GTGACTGCCCATCTGGCTGCAAGTAGAAGGGAGGGT...AAGCAGGATGAGCCAGTGCAAAGGCCCAGAGGTAGGCTGTTCCCTTTTCCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593424.5
ENST00000634655.1
CDS-3UTR CCA 90 bp CCCTGTTCCTCAAGCAAGATGCCAGACGTACCTGGGTCAGTCCAGACTCCTGACAGGTGCCTTGTCTTCTaGCTGGGCCATCGTCAGGTT +
Preference number: 4 (lower is better)
Translates to: PCSSSKMPDVPGSVQTPDRCLVF*LGHRQV
Trigger: AACCTGACGATGGCCCAGCCAGAAGACAAGGCACCT...GTCAGGAGTCTGGACTGACCCAGGTACGTCTGGCATCTTGCTTGAGGAACAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000591812.2
ENST00000635542.2
CDS-3UTR CCA 90 bp GAGGGGTCCCAGGAAAAGGGAACAGCCTACCTCTGGGCCTTTGCACTGGCTCATGCAGAACATCCCTGCTaGCTGATAGAAAGGCCAGGA +
Preference number: 4 (lower is better)
Translates to: EGSQEKGTAYLWAFALAHAEHPC*LIERPG
Trigger: TCCTGGCCTTTCTATCAGCCAGCAGGGATGTTCTGC...ATGAGCCAGTGCAAAGGCCCAGAGGTAGGCTGTTCCCTTTTCCTGGGACCCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000591812.2
ENST00000635542.2
CDS-3UTR CCA 90 bp GAGGGGTCCCAGGAAAAGGGAACAGCCTACCTCTGGGCCTTTGCACTGGCTCATAGAGCTGGTTCACAATaGAAAGCACCTTCCCTGGGG +
Preference number: 4 (lower is better)
Translates to: EGSQEKGTAYLWAFALAHRAGSQ*KAPSLG
Trigger: CCCCAGGGAAGGTGCTTTCCATTGTGAACCAGCTCT...ATGAGCCAGTGCAAAGGCCCAGAGGTAGGCTGTTCCCTTTTCCTGGGACCCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000591812.2
ENST00000635542.2
CDS-3UTR CCA 90 bp GTCACCTCAGTGAGGCTTTCTCTGATACGCCTGTCTAAAACTGCAAAGCCTCCTAGAGCCGGCCCAGGATaGTCCACTTCCGGGCTGAGC +
Preference number: 4 (lower is better)
Translates to: VTSVRLSLIRLSKTAKPPRAGPG*STSGLS
Trigger: GCTCAGCCCGGAAGTGGACCATCCTGGGCCGGCTCT...AGGAGGCTTTGCAGTTTTAGACAGGCGTATCAGAGAAAGCCTCACTGAGGTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000591812.2
ENST00000635542.2
CDS-3UTR CCA 90 bp GCTCATCCTGCTTCTCGGAATGCTCTTCCTAATACCCACTCTGCTCCTCCCTTCGCGCCCCAAACCACGTaGTCAGGTAGTACCCAGCCT +
Preference number: 4 (lower is better)
Translates to: AHPASRNALPNTHSAPPFAPQTT*SGSTQP
Trigger: AGGCTGGGTACTACCTGACCACGTGGTTTGGGGCGC...GAAGGGAGGAGCAGAGTGGGTATTAGGAAGAGCATTCCGAGAAGCAGGATGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000591812.2
ENST00000593424.5
ENST00000634655.1
ENST00000635542.2
CDS-3UTR CCA 90 bp CAAGCAAGATGCCAGACGTACCTGGGTCAGTCCAGACTCCTGACCTATGTGGTTGCGCCCCAAACCACGTaGTCAGGTAGTACCCAGCCT +
Preference number: 4 (lower is better)
Translates to: QARCQTYLGQSRLLTYVVAPQTT*SGSTQP
Trigger: AGGCTGGGTACTACCTGACCACGTGGTTTGGGGCGC...AACCACATAGGTCAGGAGTCTGGACTGACCCAGGTACGTCTGGCATCTTGCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000591812.2
ENST00000593424.5
ENST00000634655.1
ENST00000635542.2
CDS-3UTR CCA 90 bp GGGGTCCCAGGAAAAGGGAACAGCCTACCTCTGGGCCTTTGCACTGGCTCATCCAGTCTCTTCTGCCCATaGCTCCTTAAAGGGCAGGTT +
Preference number: 4 (lower is better)
Translates to: GVPGKGNSLPLGLCTGSSSLFCP*LLKGQV
Trigger: AACCTGCCCTTTAAGGAGCCATGGGCAGAAGAGACT...GGATGAGCCAGTGCAAAGGCCCAGAGGTAGGCTGTTCCCTTTTCCTGGGACCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000591812.2
ENST00000593424.5
ENST00000634655.1
ENST00000635542.2
CDS-3UTR CCA 90 bp CCCAGGAAAAGGGAACAGCCTACCTCTGGGCCTTTGCACTGGCTCATCCTGCTTAGCCTCCTGAGTAGCTaGTACCACAGGAGTACGCCA +
Preference number: 4 (lower is better)
Translates to: PRKREQPTSGPLHWLILLSLLSS*YHRSTP
Trigger: TGGCGTACTCCTGTGGTACCAGCTACTCAGGAGGCT...AAGCAGGATGAGCCAGTGCAAAGGCCCAGAGGTAGGCTGTTCCCTTTTCCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000591812.2
ENST00000593424.5
ENST00000634655.1
ENST00000635542.2
CDS-3UTR CCA 90 bp TCAGTCCAGACTCCTGACCTATGTGGTTTAGGAGCAGCAAGGAGGAGGGAGGGGGGAACAGCCTACCTCTaGGCCTTTGCACTGGCTCAT +
Preference number: 4 (lower is better)
Translates to: SVQTPDLCGLGAARRREGGTAYL*AFALAH
Trigger: ATGAGCCAGTGCAAAGGCCCAGAGGTAGGCTGTTCC...CCCCTCCCTCCTCCTTGCTGCTCCTAAACCACATAGGTCAGGAGTCTGGACTGA
57% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000591812.2
ENST00000593424.5
ENST00000634655.1
ENST00000635542.2
CDS-3UTR CCA 90 bp CAGCCTACCTCTGGGCCTTTGCACTGGCTCATCCTGCTTCTCGGAATGCTCTTCGGAACAGCCTACCTCTaGGCCTTTGCACTGGCTCAT +
Preference number: 4 (lower is better)
Translates to: QPTSGPLHWLILLLGMLFGTAYL*AFALAH
Trigger: ATGAGCCAGTGCAAAGGCCCAGAGGTAGGCTGTTCC...GAAGAGCATTCCGAGAAGCAGGATGAGCCAGTGCAAAGGCCCAGAGGTAGGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000591812.2
ENST00000593424.5
ENST00000634655.1
ENST00000635542.2
CDS-3UTR TCA 90 bp GCTCATCCTGCTTCTCGGAATGCTCTTCCTAATACCCACTCTGCTCCTCCCTTCACTGGACGTGAATGGTaGGCACGTCCTCAGGGCCTT +
Preference number: 4 (lower is better)
Translates to: AHPASRNALPNTHSAPPFTGREW*ARPQGL
Trigger: AAGGCCCTGAGGACGTGCTCACCATTCACGTCCAGT...GAAGGGAGGAGCAGAGTGGGTATTAGGAAGAGCATTCCGAGAAGCAGGATGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000591812.2
ENST00000635542.2
CDS-3UTR TCA 90 bp CAGCCTACCTCTGGGCCTTTGCACTGGCTCATCCTGCTTCTCGGAATGCTCTTCTTGGGATTACAGGCATaGACGGAGGGGTGTGAAACC +
Preference number: 4 (lower is better)
Translates to: QPTSGPLHWLILLLGMLFLGLQA*TEGCET
Trigger: GGTTTCACACCCCTCCGTTCATGCCTGTAATCCCAA...GAAGAGCATTCCGAGAAGCAGGATGAGCCAGTGCAAAGGCCCAGAGGTAGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000591812.2
ENST00000593424.5
ENST00000634655.1
ENST00000635542.2
CDS-3UTR TCA 90 bp CCCTGTTCCTCAAGCAAGATGCCAGACGTACCTGGGTCAGTCCAGACTCCTGACTTGGGATTACAGGCATaGACGGAGGGGTGTGAAACC +
Preference number: 4 (lower is better)
Translates to: PCSSSKMPDVPGSVQTPDLGLQA*TEGCET
Trigger: GGTTTCACACCCCTCCGTTCATGCCTGTAATCCCAA...GTCAGGAGTCTGGACTGACCCAGGTACGTCTGGCATCTTGCTTGAGGAACAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000591812.2
ENST00000593424.5
ENST00000634655.1
ENST00000635542.2
CDS-3UTR TCA 90 bp CAGCCTACCTCTGGGCCTTTGCACTGGCTCATCCTGCTTCTCGGAATGCTCTTCGTCAGTCCAGACTCCTaGCCTATGTGGTTTAGGAGC +
Preference number: 4 (lower is better)
Translates to: QPTSGPLHWLILLLGMLFVSPDS*PMWFRS
Trigger: GCTCCTAAACCACATAGGTCAGGAGTCTGGACTGAC...GAAGAGCATTCCGAGAAGCAGGATGAGCCAGTGCAAAGGCCCAGAGGTAGGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000591812.2
ENST00000593424.5
ENST00000634655.1
ENST00000635542.2
CDS-3UTR TCA 90 bp CCCTGTTCCTCAAGCAAGATGCCAGACGTACCTGGGTCAGTCCAGACTCCTGACGTCAGTCCAGACTCCTaGCCTATGTGGTTTAGGAGC +
Preference number: 4 (lower is better)
Translates to: PCSSSKMPDVPGSVQTPDVSPDS*PMWFRS
Trigger: GCTCCTAAACCACATAGGTCAGGAGTCTGGACTGAC...GTCAGGAGTCTGGACTGACCCAGGTACGTCTGGCATCTTGCTTGAGGAACAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000591812.2
ENST00000593424.5
ENST00000634655.1
ENST00000635542.2
CDS-3UTR TCA 90 bp TCAGTCCAGACTCCTGACCTATGTGGTTTAGGAGCAGCAAGGAGGAGGGAGGGGGTCAGTCCAGACTCCTaGCCTATGTGGTTTAGGAGC +
Preference number: 4 (lower is better)
Translates to: SVQTPDLCGLGAARRREGVSPDS*PMWFRS
Trigger: GCTCCTAAACCACATAGGTCAGGAGTCTGGACTGAC...CCCCTCCCTCCTCCTTGCTGCTCCTAAACCACATAGGTCAGGAGTCTGGACTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000591812.2
ENST00000593424.5
ENST00000634655.1
ENST00000635542.2
CDS-3UTR TCA 90 bp CAGCCTACCTCTGGGCCTTTGCACTGGCTCATCCTGCTTCTCGGAATGCTCTTCAGGTTAAGGCTGCAGTaGGCCGAGATCATGCCACTA +
Preference number: 4 (lower is better)
Translates to: QPTSGPLHWLILLLGMLFRLRLQ*AEIMPL
Trigger: TAGTGGCATGATCTCGGCTCACTGCAGCCTTAACCT...GAAGAGCATTCCGAGAAGCAGGATGAGCCAGTGCAAAGGCCCAGAGGTAGGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000591812.2
ENST00000593424.5
ENST00000634655.1
ENST00000635542.2
CDS-3UTR TCA 90 bp CCCTGTTCCTCAAGCAAGATGCCAGACGTACCTGGGTCAGTCCAGACTCCTGACAGGTTAAGGCTGCAGTaGGCCGAGATCATGCCACTA +
Preference number: 4 (lower is better)
Translates to: PCSSSKMPDVPGSVQTPDRLRLQ*AEIMPL
Trigger: TAGTGGCATGATCTCGGCTCACTGCAGCCTTAACCT...GTCAGGAGTCTGGACTGACCCAGGTACGTCTGGCATCTTGCTTGAGGAACAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000591812.2
ENST00000593424.5
ENST00000634655.1
ENST00000635542.2
CDS-3UTR TCA 90 bp GAGGGGTCCCAGGAAAAGGGAACAGCCTACCTCTGGGCCTTTGCACTGGCTCATTTGAGGTTAGGAGTTTaGGACCAGCCTGGGCAACAA +
Preference number: 4 (lower is better)
Translates to: EGSQEKGTAYLWAFALAHLRLGV*DQPGQQ
Trigger: TTGTTGCCCAGGCTGGTCTCAAACTCCTAACCTCAA...ATGAGCCAGTGCAAAGGCCCAGAGGTAGGCTGTTCCCTTTTCCTGGGACCCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000591812.2
ENST00000593424.5
ENST00000634655.1
ENST00000635542.2
CDS-3UTR TCA 90 bp CAAGCAAGATGCCAGACGTACCTGGGTCAGTCCAGACTCCTGACCTATGTGGTTACCTGGGCTCTGGGATaGTCCTTTCTGTGCAGCGTC +
Preference number: 4 (lower is better)
Translates to: QARCQTYLGQSRLLTYVVTWALG*SFLCSV
Trigger: GACGCTGCACAGAAAGGATCATCCCAGAGCCCAGGT...AACCACATAGGTCAGGAGTCTGGACTGACCCAGGTACGTCTGGCATCTTGCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000593424.5
ENST00000634655.1
CDS-3UTR GCA 90 bp CAAGCAAGATGCCAGACGTACCTGGGTCAGTCCAGACTCCTGACCTATGTGGTTGGGGCAGGTCTGGCATaGAGAGGTTGGAGGATTCCA +
Preference number: 4 (lower is better)
Translates to: QARCQTYLGQSRLLTYVVGAGLA*RGWRIP
Trigger: TGGAATCCTCCAACCTCTGCATGCCAGACCTGCCCC...AACCACATAGGTCAGGAGTCTGGACTGACCCAGGTACGTCTGGCATCTTGCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000591812.2
ENST00000635542.2
CDS-3UTR GCA 90 bp CCCAGGAAAAGGGAACAGCCTACCTCTGGGCCTTTGCACTGGCTCATCCTGCTTTGGACCCTGCCGATCTaGACAGGATCTGTGTGTTCA +
Preference number: 4 (lower is better)
Translates to: PRKREQPTSGPLHWLILLWTLPI*TGSVCS
Trigger: TGAACACACAGATCCTGTGCAGATCGGCAGGGTCCA...AAGCAGGATGAGCCAGTGCAAAGGCCCAGAGGTAGGCTGTTCCCTTTTCCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000591812.2
ENST00000635542.2
CDS-3UTR GCA 90 bp CCCTGTTCCTCAAGCAAGATGCCAGACGTACCTGGGTCAGTCCAGACTCCTGACGATGTAGGAGTCCTTTaGCAGGTGATCCTGGAGGTC +
Preference number: 4 (lower is better)
Translates to: PCSSSKMPDVPGSVQTPDDVGVL*QVILEV
Trigger: GACCTCCAGGATCACCTGGCAAAGGACTCCTACATC...GTCAGGAGTCTGGACTGACCCAGGTACGTCTGGCATCTTGCTTGAGGAACAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000591812.2
ENST00000635542.2
CDS-3UTR GCA 90 bp CAGCCTACCTCTGGGCCTTTGCACTGGCTCATCCTGCTTCTCGGAATGCTCTTCGATGTAGGAGTCCTTTaGCAGGTGATCCTGGAGGTC +
Preference number: 4 (lower is better)
Translates to: QPTSGPLHWLILLLGMLFDVGVL*QVILEV
Trigger: GACCTCCAGGATCACCTGGCAAAGGACTCCTACATC...GAAGAGCATTCCGAGAAGCAGGATGAGCCAGTGCAAAGGCCCAGAGGTAGGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000591812.2
ENST00000635542.2
CDS-3UTR GCA 90 bp CAAGCAAGATGCCAGACGTACCTGGGTCAGTCCAGACTCCTGACCTATGTGGTTAACTCTACGTCCAGCTaGGTGTCCCCAATGTCCGGG +
Preference number: 4 (lower is better)
Translates to: QARCQTYLGQSRLLTYVVNSTSS*VSPMSG
Trigger: CCCGGACATTGGGGACACGCAGCTGGACGTAGAGTT...AACCACATAGGTCAGGAGTCTGGACTGACCCAGGTACGTCTGGCATCTTGCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000591812.2
ENST00000593424.5
ENST00000634655.1
ENST00000635542.2
CDS-3UTR GCA 90 bp GCTCATCCTGCTTCTCGGAATGCTCTTCCTAATACCCACTCTGCTCCTCCCTTCAACTCTACGTCCAGCTaGGTGTCCCCAATGTCCGGG +
Preference number: 4 (lower is better)
Translates to: AHPASRNALPNTHSAPPFNSTSS*VSPMSG
Trigger: CCCGGACATTGGGGACACGCAGCTGGACGTAGAGTT...GAAGGGAGGAGCAGAGTGGGTATTAGGAAGAGCATTCCGAGAAGCAGGATGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000591812.2
ENST00000593424.5
ENST00000634655.1
ENST00000635542.2
CDS-3UTR GCA 90 bp CCCAGGAAAAGGGAACAGCCTACCTCTGGGCCTTTGCACTGGCTCATCCTGCTTGTTCCTCAAGCAAGATaGCAGACGTACCTGGGTCAG +
Preference number: 4 (lower is better)
Translates to: PRKREQPTSGPLHWLILLVPQAR*QTYLGQ
Trigger: CTGACCCAGGTACGTCTGGCATCTTGCTTGAGGAAC...AAGCAGGATGAGCCAGTGCAAAGGCCCAGAGGTAGGCTGTTCCCTTTTCCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000591812.2
ENST00000593424.5
ENST00000634655.1
ENST00000635542.2
CDS-3UTR GCA 90 bp TCAGTCCAGACTCCTGACCTATGTGGTTTAGGAGCAGCAAGGAGGAGGGAGGGGGTTCCTCAAGCAAGATaGCAGACGTACCTGGGTCAG +
Preference number: 4 (lower is better)
Translates to: SVQTPDLCGLGAARRREGVPQAR*QTYLGQ
Trigger: CTGACCCAGGTACGTCTGGCATCTTGCTTGAGGAAC...CCCCTCCCTCCTCCTTGCTGCTCCTAAACCACATAGGTCAGGAGTCTGGACTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000591812.2
ENST00000593424.5
ENST00000634655.1
ENST00000635542.2
CDS-3UTR CCA 90 bp CAAGCAAGATGCCAGACGTACCTGGGTCAGTCCAGACTCCTGACCTATGTGGTTGAGATGGGGCAGGTCTaGCATGCAGAGGTTGGAGGA +
Preference number: 4 (lower is better)
Translates to: QARCQTYLGQSRLLTYVVEMGQV*HAEVGG
Trigger: TCCTCCAACCTCTGCATGCCAGACCTGCCCCATCTC...AACCACATAGGTCAGGAGTCTGGACTGACCCAGGTACGTCTGGCATCTTGCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000591812.2
ENST00000635542.2
CDS-3UTR CCA 90 bp TGTTCCTCAAGCAAGATGCCAGACGTACCTGGGTCAGTCCAGACTCCTGACCTAAGAAAGGCCAGGAGATaGGGCAGGTCTGGCATGCAG +
Preference number: 4 (lower is better)
Translates to: CSSSKMPDVPGSVQTPDLRKARR*GRSGMQ
Trigger: CTGCATGCCAGACCTGCCCCATCTCCTGGCCTTTCT...TAGGTCAGGAGTCTGGACTGACCCAGGTACGTCTGGCATCTTGCTTGAGGAACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000591812.2
ENST00000635542.2
CDS-3UTR CCA 90 bp CCCAGGAAAAGGGAACAGCCTACCTCTGGGCCTTTGCACTGGCTCATCCTGCTTGCAGAACATCCCTGCTaGCTGATAGAAAGGCCAGGA +
Preference number: 4 (lower is better)
Translates to: PRKREQPTSGPLHWLILLAEHPC*LIERPG
Trigger: TCCTGGCCTTTCTATCAGCCAGCAGGGATGTTCTGC...AAGCAGGATGAGCCAGTGCAAAGGCCCAGAGGTAGGCTGTTCCCTTTTCCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000591812.2
ENST00000635542.2
CDS-3UTR CCA 90 bp CAAGCAAGATGCCAGACGTACCTGGGTCAGTCCAGACTCCTGACCTATGTGGTTGCAAGAGCAGGGTTCTaGGCAGAACATCCCTGCTGG +
Preference number: 4 (lower is better)
Translates to: QARCQTYLGQSRLLTYVVARAGF*AEHPCW
Trigger: CCAGCAGGGATGTTCTGCCCAGAACCCTGCTCTTGC...AACCACATAGGTCAGGAGTCTGGACTGACCCAGGTACGTCTGGCATCTTGCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000591812.2
ENST00000635542.2
CDS-3UTR CCA 90 bp TGTTCCTCAAGCAAGATGCCAGACGTACCTGGGTCAGTCCAGACTCCTGACCTACTGTGTGTTCATCTCTaGGCCCTAGAGTGGGAGGGG +
Preference number: 4 (lower is better)
Translates to: CSSSKMPDVPGSVQTPDLLCVHL*ALEWEG
Trigger: CCCCTCCCACTCTAGGGCCCAGAGATGAACACACAG...TAGGTCAGGAGTCTGGACTGACCCAGGTACGTCTGGCATCTTGCTTGAGGAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000591812.2
ENST00000635542.2
CDS-3UTR CCA 90 bp GCTCATCCTGCTTCTCGGAATGCTCTTCCTAATACCCACTCTGCTCCTCCCTTCGGAAAGCACCTTCCCTaGGGTGTCCTGTTGGACCCT +
Preference number: 4 (lower is better)
Translates to: AHPASRNALPNTHSAPPFGKHLP*GVLLDP
Trigger: AGGGTCCAACAGGACACCCCAGGGAAGGTGCTTTCC...GAAGGGAGGAGCAGAGTGGGTATTAGGAAGAGCATTCCGAGAAGCAGGATGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000591812.2
ENST00000635542.2
CDS-3UTR CCA 90 bp CAGCCTACCTCTGGGCCTTTGCACTGGCTCATCCTGCTTCTCGGAATGCTCTTCTCTCTGAGCAGCCTCTaGCTCTGTTTCTTGAGGGGT +
Preference number: 4 (lower is better)
Translates to: QPTSGPLHWLILLLGMLFSLSSL*LCFLRG
Trigger: ACCCCTCAAGAAACAGAGCCAGAGGCTGCTCAGAGA...GAAGAGCATTCCGAGAAGCAGGATGAGCCAGTGCAAAGGCCCAGAGGTAGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000591812.2
ENST00000635542.2
CDS-3UTR CCA 90 bp CCCTGTTCCTCAAGCAAGATGCCAGACGTACCTGGGTCAGTCCAGACTCCTGACTCTCTGAGCAGCCTCTaGCTCTGTTTCTTGAGGGGT +
Preference number: 4 (lower is better)
Translates to: PCSSSKMPDVPGSVQTPDSLSSL*LCFLRG
Trigger: ACCCCTCAAGAAACAGAGCCAGAGGCTGCTCAGAGA...GTCAGGAGTCTGGACTGACCCAGGTACGTCTGGCATCTTGCTTGAGGAACAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000591812.2
ENST00000635542.2
CDS-3UTR TCA 90 bp CAAGCAAGATGCCAGACGTACCTGGGTCAGTCCAGACTCCTGACCTATGTGGTTGCTGGATCATGTCTCTaGGCAGCCTCTGGCTCTGTT +
Preference number: 4 (lower is better)
Translates to: QARCQTYLGQSRLLTYVVAGSCL*AASGSV
Trigger: AACAGAGCCAGAGGCTGCTCAGAGACATGATCCAGC...AACCACATAGGTCAGGAGTCTGGACTGACCCAGGTACGTCTGGCATCTTGCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000591812.2
ENST00000635542.2
CDS-3UTR TCA 90 bp CCCTGTTCCTCAAGCAAGATGCCAGACGTACCTGGGTCAGTCCAGACTCCTGACTTCCAAAGACAGCCCTaGTGTAGGAGTCCTTTGCCA +
Preference number: 4 (lower is better)
Translates to: PCSSSKMPDVPGSVQTPDFQRQP*CRSPLP
Trigger: TGGCAAAGGACTCCTACATCAGGGCTGTCTTTGGAA...GTCAGGAGTCTGGACTGACCCAGGTACGTCTGGCATCTTGCTTGAGGAACAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000591812.2
ENST00000635542.2
CDS-3UTR GCA 90 bp TGTTCCTCAAGCAAGATGCCAGACGTACCTGGGTCAGTCCAGACTCCTGACCTATGTCCTGTTGGACCCTaGCGATCTGCACAGGATCTG +
Preference number: 4 (lower is better)
Translates to: CSSSKMPDVPGSVQTPDLCPVGP*RSAQDL
Trigger: CAGATCCTGTGCAGATCGGCAGGGTCCAACAGGACA...TAGGTCAGGAGTCTGGACTGACCCAGGTACGTCTGGCATCTTGCTTGAGGAACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000591812.2
ENST00000635542.2
CDS-3UTR GCA 90 bp TGTTCCTCAAGCAAGATGCCAGACGTACCTGGGTCAGTCCAGACTCCTGACCTACCGCATAGACATCTCTaGACACCTCCAAGAGGAGCG +
Preference number: 4 (lower is better)
Translates to: CSSSKMPDVPGSVQTPDLPHRHL*TPPRGA
Trigger: CGCTCCTCTTGGAGGTGTGCAGAGATGTCTATGCGG...TAGGTCAGGAGTCTGGACTGACCCAGGTACGTCTGGCATCTTGCTTGAGGAACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000591812.2
ENST00000593424.5
ENST00000634655.1
ENST00000635542.2
CDS-3UTR GCA 90 bp CCCAGGAAAAGGGAACAGCCTACCTCTGGGCCTTTGCACTGGCTCATCCTGCTTTGTCACAGTCTCTTCTaGCCATGGCTCCTTAAAGGG +
Preference number: 4 (lower is better)
Translates to: PRKREQPTSGPLHWLILLCHSLF*PWLLKG
Trigger: CCCTTTAAGGAGCCATGGGCAGAAGAGACTGTGACA...AAGCAGGATGAGCCAGTGCAAAGGCCCAGAGGTAGGCTGTTCCCTTTTCCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000591812.2
ENST00000593424.5
ENST00000634655.1
ENST00000635542.2
CDS-3UTR GCA 90 bp CAAGCAAGATGCCAGACGTACCTGGGTCAGTCCAGACTCCTGACCTATGTGGTTGGGGTCCCACTGTTTTaGCCAGGCTGGTCTCAAACT +
Preference number: 4 (lower is better)
Translates to: QARCQTYLGQSRLLTYVVGVPLF*PGWSQT
Trigger: AGTTTGAGACCAGCCTGGGCAAAACAGTGGGACCCC...AACCACATAGGTCAGGAGTCTGGACTGACCCAGGTACGTCTGGCATCTTGCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000591812.2
ENST00000593424.5
ENST00000634655.1
ENST00000635542.2
CDS-3UTR GCA 90 bp CCCAGGAAAAGGGAACAGCCTACCTCTGGGCCTTTGCACTGGCTCATCCTGCTTTCCTTCAGGCCTTTCTaGAGATGTCACCTCAGTGAG +
Preference number: 4 (lower is better)
Translates to: PRKREQPTSGPLHWLILLSFRPF*RCHLSE
Trigger: CTCACTGAGGTGACATCTGCAGAAAGGCCTGAAGGA...AAGCAGGATGAGCCAGTGCAAAGGCCCAGAGGTAGGCTGTTCCCTTTTCCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000591812.2
ENST00000593424.5
ENST00000634655.1
ENST00000635542.2
CDS-3UTR GCA 90 bp GCTCATCCTGCTTCTCGGAATGCTCTTCCTAATACCCACTCTGCTCCTCCCTTCCTACCTCTGGGCCTTTaGACTGGCTCATCCTGCTTC +
Preference number: 4 (lower is better)
Translates to: AHPASRNALPNTHSAPPFLPLGL*TGSSCF
Trigger: GAAGCAGGATGAGCCAGTGCAAAGGCCCAGAGGTAG...GAAGGGAGGAGCAGAGTGGGTATTAGGAAGAGCATTCCGAGAAGCAGGATGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000591812.2
ENST00000593424.5
ENST00000634655.1
ENST00000635542.2
CDS-3UTR GCA 90 bp TCAGTCCAGACTCCTGACCTATGTGGTTTAGGAGCAGCAAGGAGGAGGGAGGGGAGGCATGCGCCACCATaGCCGGCTAAGTTTGTATTT +
Preference number: 4 (lower is better)
Translates to: SVQTPDLCGLGAARRREGRHAPP*PAKFVF
Trigger: AAATACAAACTTAGCCGGGCATGGTGGCGCATGCCT...CCCCTCCCTCCTCCTTGCTGCTCCTAAACCACATAGGTCAGGAGTCTGGACTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000591812.2
ENST00000593424.5
ENST00000634655.1
ENST00000635542.2
CDS-3UTR GCA 90 bp TGTTCCTCAAGCAAGATGCCAGACGTACCTGGGTCAGTCCAGACTCCTGACCTAACCCTCCCTTCTACTTaGAGCCAGATGGGCAGTCAC +
Preference number: 4 (lower is better)
Translates to: CSSSKMPDVPGSVQTPDLTLPST*SQMGSH
Trigger: GTGACTGCCCATCTGGCTGCAAGTAGAAGGGAGGGT...TAGGTCAGGAGTCTGGACTGACCCAGGTACGTCTGGCATCTTGCTTGAGGAACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000593424.5
ENST00000634655.1
CDS-3UTR CCA 90 bp CAAGCAAGATGCCAGACGTACCTGGGTCAGTCCAGACTCCTGACCTATGTGGTTAGGTGCCTTGTCTTCTaGCTGGGCCATCGTCAGGTT +
Preference number: 4 (lower is better)
Translates to: QARCQTYLGQSRLLTYVVRCLVF*LGHRQV
Trigger: AACCTGACGATGGCCCAGCCAGAAGACAAGGCACCT...AACCACATAGGTCAGGAGTCTGGACTGACCCAGGTACGTCTGGCATCTTGCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000591812.2
ENST00000635542.2
CDS-3UTR CCA 90 bp GTCACCTCAGTGAGGCTTTCTCTGATACGCCTGTCTAAAACTGCAAAGCCTCCTGCCTCACCCCCTCTGTaGGGACTTCAGGTGCCTTGT +
Preference number: 4 (lower is better)
Translates to: VTSVRLSLIRLSKTAKPPASPPL*GLQVPC
Trigger: ACAAGGCACCTGAAGTCCCCACAGAGGGGGTGAGGC...AGGAGGCTTTGCAGTTTTAGACAGGCGTATCAGAGAAAGCCTCACTGAGGTGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000591812.2
ENST00000635542.2
CDS-3UTR CCA 90 bp CCCAGGAAAAGGGAACAGCCTACCTCTGGGCCTTTGCACTGGCTCATCCTGCTTAGTCTCTTCTGCCCATaGCTCCTTAAAGGGCAGGTT +
Preference number: 4 (lower is better)
Translates to: PRKREQPTSGPLHWLILLSLFCP*LLKGQV
Trigger: AACCTGCCCTTTAAGGAGCCATGGGCAGAAGAGACT...AAGCAGGATGAGCCAGTGCAAAGGCCCAGAGGTAGGCTGTTCCCTTTTCCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000591812.2
ENST00000593424.5
ENST00000634655.1
ENST00000635542.2
CDS-3UTR CCA 90 bp TCAGTCCAGACTCCTGACCTATGTGGTTTAGGAGCAGCAAGGAGGAGGGAGGGGAGTCTCTTCTGCCCATaGCTCCTTAAAGGGCAGGTT +
Preference number: 4 (lower is better)
Translates to: SVQTPDLCGLGAARRREGSLFCP*LLKGQV
Trigger: AACCTGCCCTTTAAGGAGCCATGGGCAGAAGAGACT...CCCCTCCCTCCTCCTTGCTGCTCCTAAACCACATAGGTCAGGAGTCTGGACTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000591812.2
ENST00000593424.5
ENST00000634655.1
ENST00000635542.2
CDS-3UTR CCA 90 bp CCCTGTTCCTCAAGCAAGATGCCAGACGTACCTGGGTCAGTCCAGACTCCTGACACCCCTAGTTGTCACTaGTCCCTGTCACAGTCTCTT +
Preference number: 4 (lower is better)
Translates to: PCSSSKMPDVPGSVQTPDTPSCH*SLSQSL
Trigger: AAGAGACTGTGACAGGGACCAGTGACAACTAGGGGT...GTCAGGAGTCTGGACTGACCCAGGTACGTCTGGCATCTTGCTTGAGGAACAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000591812.2
ENST00000593424.5
ENST00000634655.1
ENST00000635542.2
CDS-3UTR CCA 90 bp CAGCCTACCTCTGGGCCTTTGCACTGGCTCATCCTGCTTCTCGGAATGCTCTTCACCCCTAGTTGTCACTaGTCCCTGTCACAGTCTCTT +
Preference number: 4 (lower is better)
Translates to: QPTSGPLHWLILLLGMLFTPSCH*SLSQSL
Trigger: AAGAGACTGTGACAGGGACCAGTGACAACTAGGGGT...GAAGAGCATTCCGAGAAGCAGGATGAGCCAGTGCAAAGGCCCAGAGGTAGGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000591812.2
ENST00000593424.5
ENST00000634655.1
ENST00000635542.2
CDS-3UTR CCA 90 bp CCCAGGAAAAGGGAACAGCCTACCTCTGGGCCTTTGCACTGGCTCATCCTGCTTACCCCTAGTTGTCACTaGTCCCTGTCACAGTCTCTT +
Preference number: 4 (lower is better)
Translates to: PRKREQPTSGPLHWLILLTPSCH*SLSQSL
Trigger: AAGAGACTGTGACAGGGACCAGTGACAACTAGGGGT...AAGCAGGATGAGCCAGTGCAAAGGCCCAGAGGTAGGCTGTTCCCTTTTCCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000591812.2
ENST00000593424.5
ENST00000634655.1
ENST00000635542.2
CDS-3UTR CCA 90 bp TGTTCCTCAAGCAAGATGCCAGACGTACCTGGGTCAGTCCAGACTCCTGACCTAAGCCTCCTGAGTAGCTaGTACCACAGGAGTACGCCA +
Preference number: 4 (lower is better)
Translates to: CSSSKMPDVPGSVQTPDLSLLSS*YHRSTP
Trigger: TGGCGTACTCCTGTGGTACCAGCTACTCAGGAGGCT...TAGGTCAGGAGTCTGGACTGACCCAGGTACGTCTGGCATCTTGCTTGAGGAACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000591812.2
ENST00000593424.5
ENST00000634655.1
ENST00000635542.2
CDS-3UTR CCA 90 bp GCTCATCCTGCTTCTCGGAATGCTCTTCCTAATACCCACTCTGCTCCTCCCTTCTCTGGGCCTTTGCACTaGCTCATCCTGCTTCTCGGA +
Preference number: 4 (lower is better)
Translates to: AHPASRNALPNTHSAPPFSGPLH*LILLLG
Trigger: TCCGAGAAGCAGGATGAGCCAGTGCAAAGGCCCAGA...GAAGGGAGGAGCAGAGTGGGTATTAGGAAGAGCATTCCGAGAAGCAGGATGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000591812.2
ENST00000593424.5
ENST00000634655.1
ENST00000635542.2
CDS-3UTR CCA 90 bp TGTTCCTCAAGCAAGATGCCAGACGTACCTGGGTCAGTCCAGACTCCTGACCTAGGAACAGCCTACCTCTaGGCCTTTGCACTGGCTCAT +
Preference number: 4 (lower is better)
Translates to: CSSSKMPDVPGSVQTPDLGTAYL*AFALAH
Trigger: ATGAGCCAGTGCAAAGGCCCAGAGGTAGGCTGTTCC...TAGGTCAGGAGTCTGGACTGACCCAGGTACGTCTGGCATCTTGCTTGAGGAACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000591812.2
ENST00000593424.5
ENST00000634655.1
ENST00000635542.2
CDS-3UTR CCA 90 bp CAAGCAAGATGCCAGACGTACCTGGGTCAGTCCAGACTCCTGACCTATGTGGTTGGAACAGCCTACCTCTaGGCCTTTGCACTGGCTCAT +
Preference number: 4 (lower is better)
Translates to: QARCQTYLGQSRLLTYVVGTAYL*AFALAH
Trigger: ATGAGCCAGTGCAAAGGCCCAGAGGTAGGCTGTTCC...AACCACATAGGTCAGGAGTCTGGACTGACCCAGGTACGTCTGGCATCTTGCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000591812.2
ENST00000593424.5
ENST00000634655.1
ENST00000635542.2
CDS-3UTR CCA 90 bp TCAGTCCAGACTCCTGACCTATGTGGTTTAGGAGCAGCAAGGAGGAGGGAGGGGAAAAACGATCACAATTaGGCACGGTGGCTCACGCCT +
Preference number: 4 (lower is better)
Translates to: SVQTPDLCGLGAARRREGKNDHN*ARWLTP
Trigger: AGGCGTGAGCCACCGTGCCCAATTGTGATCGTTTTT...CCCCTCCCTCCTCCTTGCTGCTCCTAAACCACATAGGTCAGGAGTCTGGACTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000591812.2
ENST00000593424.5
ENST00000634655.1
ENST00000635542.2
CDS-3UTR CCA 90 bp CCCAGGAAAAGGGAACAGCCTACCTCTGGGCCTTTGCACTGGCTCATCCTGCTTAAAAACGATCACAATTaGGCACGGTGGCTCACGCCT +
Preference number: 4 (lower is better)
Translates to: PRKREQPTSGPLHWLILLKNDHN*ARWLTP
Trigger: AGGCGTGAGCCACCGTGCCCAATTGTGATCGTTTTT...AAGCAGGATGAGCCAGTGCAAAGGCCCAGAGGTAGGCTGTTCCCTTTTCCTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000591812.2
ENST00000593424.5
ENST00000634655.1
ENST00000635542.2
CDS-3UTR TCA 90 bp CCCTGTTCCTCAAGCAAGATGCCAGACGTACCTGGGTCAGTCCAGACTCCTGACGGATCTGGTAGGTATTaGCTTCTCCTGGTAAAGGTC +
Preference number: 4 (lower is better)
Translates to: PCSSSKMPDVPGSVQTPDGSGRY*LLLVKV
Trigger: GACCTTTACCAGGAGAAGTCAATACCTACCAGATCC...GTCAGGAGTCTGGACTGACCCAGGTACGTCTGGCATCTTGCTTGAGGAACAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000591812.2
ENST00000635542.2
CDS-3UTR TCA 90 bp GCTCATCCTGCTTCTCGGAATGCTCTTCCTAATACCCACTCTGCTCCTCCCTTCTTGGGATTACAGGCATaGACGGAGGGGTGTGAAACC +
Preference number: 4 (lower is better)
Translates to: AHPASRNALPNTHSAPPFLGLQA*TEGCET
Trigger: GGTTTCACACCCCTCCGTTCATGCCTGTAATCCCAA...GAAGGGAGGAGCAGAGTGGGTATTAGGAAGAGCATTCCGAGAAGCAGGATGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000591812.2
ENST00000593424.5
ENST00000634655.1
ENST00000635542.2
CDS-3UTR TCA 90 bp GCTCATCCTGCTTCTCGGAATGCTCTTCCTAATACCCACTCTGCTCCTCCCTTCAACTGCAAAGCCTCCTaGGTAGCTGGTACCACAGGA +
Preference number: 4 (lower is better)
Translates to: AHPASRNALPNTHSAPPFNCKAS*VAGTTG
Trigger: TCCTGTGGTACCAGCTACTCAGGAGGCTTTGCAGTT...GAAGGGAGGAGCAGAGTGGGTATTAGGAAGAGCATTCCGAGAAGCAGGATGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000591812.2
ENST00000593424.5
ENST00000634655.1
ENST00000635542.2
CDS-3UTR TCA 90 bp CAAGCAAGATGCCAGACGTACCTGGGTCAGTCCAGACTCCTGACCTATGTGGTTAACTGCAAAGCCTCCTaGGTAGCTGGTACCACAGGA +
Preference number: 4 (lower is better)
Translates to: QARCQTYLGQSRLLTYVVNCKAS*VAGTTG
Trigger: TCCTGTGGTACCAGCTACTCAGGAGGCTTTGCAGTT...AACCACATAGGTCAGGAGTCTGGACTGACCCAGGTACGTCTGGCATCTTGCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000591812.2
ENST00000593424.5
ENST00000634655.1
ENST00000635542.2
CDS-3UTR TCA 90 bp CAAGCAAGATGCCAGACGTACCTGGGTCAGTCCAGACTCCTGACCTATGTGGTTGTCAGTCCAGACTCCTaGCCTATGTGGTTTAGGAGC +
Preference number: 4 (lower is better)
Translates to: QARCQTYLGQSRLLTYVVVSPDS*PMWFRS
Trigger: GCTCCTAAACCACATAGGTCAGGAGTCTGGACTGAC...AACCACATAGGTCAGGAGTCTGGACTGACCCAGGTACGTCTGGCATCTTGCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000591812.2
ENST00000593424.5
ENST00000634655.1
ENST00000635542.2
CDS-3UTR TCA 90 bp TGTTCCTCAAGCAAGATGCCAGACGTACCTGGGTCAGTCCAGACTCCTGACCTAAGGTTAAGGCTGCAGTaGGCCGAGATCATGCCACTA +
Preference number: 4 (lower is better)
Translates to: CSSSKMPDVPGSVQTPDLRLRLQ*AEIMPL
Trigger: TAGTGGCATGATCTCGGCTCACTGCAGCCTTAACCT...TAGGTCAGGAGTCTGGACTGACCCAGGTACGTCTGGCATCTTGCTTGAGGAACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000591812.2
ENST00000593424.5
ENST00000634655.1
ENST00000635542.2
CDS-3UTR TCA 90 bp GTCACCTCAGTGAGGCTTTCTCTGATACGCCTGTCTAAAACTGCAAAGCCTCCTACCTGGGCTCTGGGATaGTCCTTTCTGTGCAGCGTC +
Preference number: 4 (lower is better)
Translates to: VTSVRLSLIRLSKTAKPPTWALG*SFLCSV
Trigger: GACGCTGCACAGAAAGGATCATCCCAGAGCCCAGGT...AGGAGGCTTTGCAGTTTTAGACAGGCGTATCAGAGAAAGCCTCACTGAGGTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593424.5
ENST00000634655.1
CDS-3UTR GCA 90 bp TGTTCCTCAAGCAAGATGCCAGACGTACCTGGGTCAGTCCAGACTCCTGACCTATGGACCCTGCCGATCTaGACAGGATCTGTGTGTTCA +
Preference number: 4 (lower is better)
Translates to: CSSSKMPDVPGSVQTPDLWTLPI*TGSVCS
Trigger: TGAACACACAGATCCTGTGCAGATCGGCAGGGTCCA...TAGGTCAGGAGTCTGGACTGACCCAGGTACGTCTGGCATCTTGCTTGAGGAACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000591812.2
ENST00000635542.2
CDS-3UTR GCA 90 bp CAAGCAAGATGCCAGACGTACCTGGGTCAGTCCAGACTCCTGACCTATGTGGTTGTTCCTCAAGCAAGATaGCAGACGTACCTGGGTCAG +
Preference number: 4 (lower is better)
Translates to: QARCQTYLGQSRLLTYVVVPQAR*QTYLGQ
Trigger: CTGACCCAGGTACGTCTGGCATCTTGCTTGAGGAAC...AACCACATAGGTCAGGAGTCTGGACTGACCCAGGTACGTCTGGCATCTTGCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000591812.2
ENST00000593424.5
ENST00000634655.1
ENST00000635542.2
CDS-3UTR CCA 90 bp TGTTCCTCAAGCAAGATGCCAGACGTACCTGGGTCAGTCCAGACTCCTGACCTACCAGGGACACACCTCTaGGAATCTTCTGGATCTGGT +
Preference number: 4 (lower is better)
Translates to: CSSSKMPDVPGSVQTPDLPGTHL*ESSGSG
Trigger: ACCAGATCCAGAAGATTCCCAGAGGTGTGTCCCTGG...TAGGTCAGGAGTCTGGACTGACCCAGGTACGTCTGGCATCTTGCTTGAGGAACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000591812.2
ENST00000635542.2
CDS-3UTR CCA 90 bp GCTCATCCTGCTTCTCGGAATGCTCTTCCTAATACCCACTCTGCTCCTCCCTTCCCAGGGACACACCTCTaGGAATCTTCTGGATCTGGT +
Preference number: 4 (lower is better)
Translates to: AHPASRNALPNTHSAPPFPGTHL*ESSGSG
Trigger: ACCAGATCCAGAAGATTCCCAGAGGTGTGTCCCTGG...GAAGGGAGGAGCAGAGTGGGTATTAGGAAGAGCATTCCGAGAAGCAGGATGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000591812.2
ENST00000635542.2
CDS-3UTR CCA 90 bp GCTCATCCTGCTTCTCGGAATGCTCTTCCTAATACCCACTCTGCTCCTCCCTTCAGAGCTGGTTCACAATaGAAAGCACCTTCCCTGGGG +
Preference number: 4 (lower is better)
Translates to: AHPASRNALPNTHSAPPFRAGSQ*KAPSLG
Trigger: CCCCAGGGAAGGTGCTTTCCATTGTGAACCAGCTCT...GAAGGGAGGAGCAGAGTGGGTATTAGGAAGAGCATTCCGAGAAGCAGGATGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000591812.2
ENST00000635542.2
CDS-3UTR CCA 90 bp GTCACCTCAGTGAGGCTTTCTCTGATACGCCTGTCTAAAACTGCAAAGCCTCCTAGGGTTCCTGGGGGCTaGATCATGTCTCTGAGCAGC +
Preference number: 4 (lower is better)
Translates to: VTSVRLSLIRLSKTAKPPRVPGG*IMSLSS
Trigger: GCTGCTCAGAGACATGATCCAGCCCCCAGGAACCCT...AGGAGGCTTTGCAGTTTTAGACAGGCGTATCAGAGAAAGCCTCACTGAGGTGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000591812.2
ENST00000635542.2
CDS-3UTR TCA 90 bp CAAGCAAGATGCCAGACGTACCTGGGTCAGTCCAGACTCCTGACCTATGTGGTTTTCCAAAGACAGCCCTaGTGTAGGAGTCCTTTGCCA +
Preference number: 4 (lower is better)
Translates to: QARCQTYLGQSRLLTYVVFQRQP*CRSPLP
Trigger: TGGCAAAGGACTCCTACATCAGGGCTGTCTTTGGAA...AACCACATAGGTCAGGAGTCTGGACTGACCCAGGTACGTCTGGCATCTTGCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000591812.2
ENST00000635542.2
CDS-3UTR TCA 90 bp GCTCATCCTGCTTCTCGGAATGCTCTTCCTAATACCCACTCTGCTCCTCCCTTCTTGAGGTTAGGAGTTTaGGACCAGCCTGGGCAACAA +
Preference number: 4 (lower is better)
Translates to: AHPASRNALPNTHSAPPFLRLGV*DQPGQQ
Trigger: TTGTTGCCCAGGCTGGTCTCAAACTCCTAACCTCAA...GAAGGGAGGAGCAGAGTGGGTATTAGGAAGAGCATTCCGAGAAGCAGGATGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000591812.2
ENST00000593424.5
ENST00000634655.1
ENST00000635542.2
CDS-3UTR TCA 90 bp TGTTCCTCAAGCAAGATGCCAGACGTACCTGGGTCAGTCCAGACTCCTGACCTATTGAGGTTAGGAGTTTaGGACCAGCCTGGGCAACAA +
Preference number: 4 (lower is better)
Translates to: CSSSKMPDVPGSVQTPDLLRLGV*DQPGQQ
Trigger: TTGTTGCCCAGGCTGGTCTCAAACTCCTAACCTCAA...TAGGTCAGGAGTCTGGACTGACCCAGGTACGTCTGGCATCTTGCTTGAGGAACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000591812.2
ENST00000593424.5
ENST00000634655.1
ENST00000635542.2
CDS-3UTR GCA 90 bp GCTCATCCTGCTTCTCGGAATGCTCTTCCTAATACCCACTCTGCTCCTCCCTTCTGTCACAGTCTCTTCTaGCCATGGCTCCTTAAAGGG +
Preference number: 4 (lower is better)
Translates to: AHPASRNALPNTHSAPPFCHSLF*PWLLKG
Trigger: CCCTTTAAGGAGCCATGGGCAGAAGAGACTGTGACA...GAAGGGAGGAGCAGAGTGGGTATTAGGAAGAGCATTCCGAGAAGCAGGATGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000591812.2
ENST00000593424.5
ENST00000634655.1
ENST00000635542.2
CDS-3UTR GCA 90 bp CAAGCAAGATGCCAGACGTACCTGGGTCAGTCCAGACTCCTGACCTATGTGGTTTCCTTCAGGCCTTTCTaGAGATGTCACCTCAGTGAG +
Preference number: 4 (lower is better)
Translates to: QARCQTYLGQSRLLTYVVSFRPF*RCHLSE
Trigger: CTCACTGAGGTGACATCTGCAGAAAGGCCTGAAGGA...AACCACATAGGTCAGGAGTCTGGACTGACCCAGGTACGTCTGGCATCTTGCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000591812.2
ENST00000593424.5
ENST00000634655.1
ENST00000635542.2
CDS-3UTR GCA 90 bp TGTTCCTCAAGCAAGATGCCAGACGTACCTGGGTCAGTCCAGACTCCTGACCTAAGGCATGCGCCACCATaGCCGGCTAAGTTTGTATTT +
Preference number: 4 (lower is better)
Translates to: CSSSKMPDVPGSVQTPDLRHAPP*PAKFVF
Trigger: AAATACAAACTTAGCCGGGCATGGTGGCGCATGCCT...TAGGTCAGGAGTCTGGACTGACCCAGGTACGTCTGGCATCTTGCTTGAGGAACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000591812.2
ENST00000593424.5
ENST00000634655.1
ENST00000635542.2
CDS-3UTR CCA 90 bp CAAGCAAGATGCCAGACGTACCTGGGTCAGTCCAGACTCCTGACCTATGTGGTTACCCCTAGTTGTCACTaGTCCCTGTCACAGTCTCTT +
Preference number: 4 (lower is better)
Translates to: QARCQTYLGQSRLLTYVVTPSCH*SLSQSL
Trigger: AAGAGACTGTGACAGGGACCAGTGACAACTAGGGGT...AACCACATAGGTCAGGAGTCTGGACTGACCCAGGTACGTCTGGCATCTTGCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000591812.2
ENST00000593424.5
ENST00000634655.1
ENST00000635542.2
CDS-3UTR CCA 90 bp GTCACCTCAGTGAGGCTTTCTCTGATACGCCTGTCTAAAACTGCAAAGCCTCCTAGCCTCCTGAGTAGCTaGTACCACAGGAGTACGCCA +
Preference number: 4 (lower is better)
Translates to: VTSVRLSLIRLSKTAKPPSLLSS*YHRSTP
Trigger: TGGCGTACTCCTGTGGTACCAGCTACTCAGGAGGCT...AGGAGGCTTTGCAGTTTTAGACAGGCGTATCAGAGAAAGCCTCACTGAGGTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000591812.2
ENST00000593424.5
ENST00000634655.1
ENST00000635542.2
CDS-3UTR CCA 90 bp CAAGCAAGATGCCAGACGTACCTGGGTCAGTCCAGACTCCTGACCTATGTGGTTAAAAACGATCACAATTaGGCACGGTGGCTCACGCCT +
Preference number: 4 (lower is better)
Translates to: QARCQTYLGQSRLLTYVVKNDHN*ARWLTP
Trigger: AGGCGTGAGCCACCGTGCCCAATTGTGATCGTTTTT...AACCACATAGGTCAGGAGTCTGGACTGACCCAGGTACGTCTGGCATCTTGCTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000591812.2
ENST00000593424.5
ENST00000634655.1
ENST00000635542.2
CDS-3UTR CCA 90 bp GCTCATCCTGCTTCTCGGAATGCTCTTCCTAATACCCACTCTGCTCCTCCCTTCAAAAACGATCACAATTaGGCACGGTGGCTCACGCCT +
Preference number: 4 (lower is better)
Translates to: AHPASRNALPNTHSAPPFKNDHN*ARWLTP
Trigger: AGGCGTGAGCCACCGTGCCCAATTGTGATCGTTTTT...GAAGGGAGGAGCAGAGTGGGTATTAGGAAGAGCATTCCGAGAAGCAGGATGAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000591812.2
ENST00000593424.5
ENST00000634655.1
ENST00000635542.2
CDS-3UTR TCA 90 bp GTCACCTCAGTGAGGCTTTCTCTGATACGCCTGTCTAAAACTGCAAAGCCTCCTAACTGCAAAGCCTCCTaGGTAGCTGGTACCACAGGA +
Preference number: 4 (lower is better)
Translates to: VTSVRLSLIRLSKTAKPPNCKAS*VAGTTG
Trigger: TCCTGTGGTACCAGCTACTCAGGAGGCTTTGCAGTT...AGGAGGCTTTGCAGTTTTAGACAGGCGTATCAGAGAAAGCCTCACTGAGGTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000591812.2
ENST00000593424.5
ENST00000634655.1
ENST00000635542.2
CDS-3UTR TCA 90 bp GTCACCTCAGTGAGGCTTTCTCTGATACGCCTGTCTAAAACTGCAAAGCCTCCTAGGTTAAGGCTGCAGTaGGCCGAGATCATGCCACTA +
Preference number: 4 (lower is better)
Translates to: VTSVRLSLIRLSKTAKPPRLRLQ*AEIMPL
Trigger: TAGTGGCATGATCTCGGCTCACTGCAGCCTTAACCT...AGGAGGCTTTGCAGTTTTAGACAGGCGTATCAGAGAAAGCCTCACTGAGGTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000591812.2
ENST00000593424.5
ENST00000634655.1
ENST00000635542.2
CDS-3UTR GCA 90 bp GTCACCTCAGTGAGGCTTTCTCTGATACGCCTGTCTAAAACTGCAAAGCCTCCTTGGGCAGAACATCCCTaGTGGCTGATAGAAAGGCCA +
Preference number: 4 (lower is better)
Translates to: VTSVRLSLIRLSKTAKPPWAEHP*WLIERP
Trigger: TGGCCTTTCTATCAGCCAGCAGGGATGTTCTGCCCA...AGGAGGCTTTGCAGTTTTAGACAGGCGTATCAGAGAAAGCCTCACTGAGGTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000591812.2
ENST00000635542.2
CDS-3UTR CCA 90 bp GTCACCTCAGTGAGGCTTTCTCTGATACGCCTGTCTAAAACTGCAAAGCCTCCTCAGTCACCTGGGCTCTaGGATGATCCTTTCTGTGCA +
Preference number: 4 (lower is better)
Translates to: VTSVRLSLIRLSKTAKPPQSPGL*DDPFCA
Trigger: TGCACAGAAAGGATCATCCCAGAGCCCAGGTGACTG...AGGAGGCTTTGCAGTTTTAGACAGGCGTATCAGAGAAAGCCTCACTGAGGTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593424.5
ENST00000634655.1
CDS-3UTR GCA 90 bp GTCACCTCAGTGAGGCTTTCTCTGATACGCCTGTCTAAAACTGCAAAGCCTCCTTGTCACAGTCTCTTCTaGCCATGGCTCCTTAAAGGG +
Preference number: 4 (lower is better)
Translates to: VTSVRLSLIRLSKTAKPPCHSLF*PWLLKG
Trigger: CCCTTTAAGGAGCCATGGGCAGAAGAGACTGTGACA...AGGAGGCTTTGCAGTTTTAGACAGGCGTATCAGAGAAAGCCTCACTGAGGTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000591812.2
ENST00000593424.5
ENST00000634655.1
ENST00000635542.2
CDS-3UTR GCA 90 bp GTCACCTCAGTGAGGCTTTCTCTGATACGCCTGTCTAAAACTGCAAAGCCTCCTAGGCATGCGCCACCATaGCCGGCTAAGTTTGTATTT +
Preference number: 4 (lower is better)
Translates to: VTSVRLSLIRLSKTAKPPRHAPP*PAKFVF
Trigger: AAATACAAACTTAGCCGGGCATGGTGGCGCATGCCT...AGGAGGCTTTGCAGTTTTAGACAGGCGTATCAGAGAAAGCCTCACTGAGGTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000591812.2
ENST00000593424.5
ENST00000634655.1
ENST00000635542.2
CDS GCA 90 bp AAGAGGAGCGCCACCTTGCGGCGCGGGGCGCAGGCAGCGTGGAGGTaGGCAAGGCGCTCGTGGATGCGGCTCCGCAAGGCGGGGGCGGGG +
Preference number: 5 (lower is better)
Translates to: KRSATLRRGAQAAWR*ARRSWMRLRKAGAG
Trigger: CCCCGCCCCCGCCTTGCGGAGCCGCATCCACGAGCGCCTTGCGCACCTCCACGCTGCCTGCGCCCCGCGCCGCAAGGTGGCGCTCCTCTT
77% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000589111.5
ENST00000591812.2
ENST00000598904.5
ENST00000634669.1
ENST00000635328.1
ENST00000635542.2
CDS GCA 90 bp CGCCCGCAGGGCTGTCTGTCGCCGCCGCAGCCGCCGCAGCTCCGGTaGTCGGAGTGTGCGGAGTCGTGTCCACAGGGCCGGCTTCAGGGG +
Preference number: 5 (lower is better)
Translates to: RPQGCLSPPQPPQLR*SECAESCPQGRLQG
Trigger: CCCCTGAAGCCGGCCCTGTGGACACGACTCCGCACACTCCGAGCACCGGAGCTGCGGCGGCTGCGGCGGCGACAGACAGCCCTGCGGGCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000589111.5
ENST00000591812.2
ENST00000598904.5
ENST00000634669.1
ENST00000635328.1
ENST00000635542.2
CDS GCA 90 bp CTGTCTGTCGCCGCCGCAGCCGCCGCAGCTCCGGTGCTCGGAGTGTaGGGAGTCGTGTCCACAGGGCCGGCTTCAGGGGCGCCAGCACCG +
Preference number: 5 (lower is better)
Translates to: LSVAAAAAAAPVLGV*GVVSTGPASGAPAP
Trigger: CGGTGCTGGCGCCCCTGAAGCCGGCCCTGTGGACACGACTCCGCACACTCCGAGCACCGGAGCTGCGGCGGCTGCGGCGGCGACAGACAG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000589111.5
ENST00000591812.2
ENST00000598904.5
ENST00000634669.1
ENST00000635328.1
ENST00000635542.2
CDS CCA 90 bp ACCTCCAAGAGGAGCGCCACCTTGCGGCGCGGGGCGCAGGCAGCGTaGAGGTGCGCAAGGCGCTCGTGGATGCGGCTCCGCAAGGCGGGG +
Preference number: 5 (lower is better)
Translates to: TSKRSATLRRGAQAA*RCARRSWMRLRKAG
Trigger: CCCCGCCTTGCGGAGCCGCATCCACGAGCGCCTTGCGCACCTCCACGCTGCCTGCGCCCCGCGCCGCAAGGTGGCGCTCCTCTTGGAGGT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000589111.5
ENST00000591812.2
ENST00000598904.5
ENST00000634669.1
ENST00000635328.1
ENST00000635542.2
CDS CCA 90 bp CGGAGTCGTGTCCACAGGGCCGGCTTCAGGGGCGCCAGCACCGCCTaGCACACCGCCGTCTCCAGCGCGGGGCCTGGATCCTCGTCCTTC +
Preference number: 5 (lower is better)
Translates to: RSRVHRAGFRGASTA*HTAVSSAGPGSSSF
Trigger: GAAGGACGAGGATCCAGGCCCCGCGCTGGAGACGGCGGTGTGCCAGGCGGTGCTGGCGCCCCTGAAGCCGGCCCTGTGGACACGACTCCG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000589111.5
ENST00000591812.2
ENST00000598904.5
ENST00000634669.1
ENST00000635328.1
ENST00000635542.2
CDS TCA 90 bp CCAGTAGGCTGGCGAGAGCCGGCCCAGGATGGTCCACTTCCGGGCTaGGCGGGCCTTTCACCCAGGAGACCCCGTGAGGCGCAGGGTTCC +
Preference number: 5 (lower is better)
Translates to: PVGWREPAQDGPLPG*AGLSPRRPREAQGS
Trigger: GGAACCCTGCGCCTCACGGGGTCTCCTGGGTGAAAGGCCCGCTCAGCCCGGAAGTGGACCATCCTGGGCCGGCTCTCGCCAGCCTACTGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000589111.5
ENST00000591812.2
ENST00000598904.5
ENST00000634669.1
ENST00000635328.1
ENST00000635542.2
CDS GCA 90 bp GGCCCGCATAGACATCTCTGCACACCTCCAAGAGGAGCGCCACCTTaGGGCGCGGGGCGCAGGCAGCGTGGAGGTGCGCAAGGCGCTCGT +
Preference number: 5 (lower is better)
Translates to: GPHRHLCTPPRGAPP*GAGRRQRGGAQGAR
Trigger: ACGAGCGCCTTGCGCACCTCCACGCTGCCTGCGCCCCGCGCCGCAAGGTGGCGCTCCTCTTGGAGGTGTGCAGAGATGTCTATGCGGGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000589111.5
ENST00000591812.2
ENST00000598904.5
ENST00000634669.1
ENST00000635328.1
ENST00000635542.2
CDS GCA 90 bp GGGGATCTTGGTTCTCGCCTCGAGCCAGGCCCGCATAGACATCTCTaGACACCTCCAAGAGGAGCGCCACCTTGCGGCGCGGGGCGCAGG +
Preference number: 5 (lower is better)
Translates to: GDLGSRLEPGPHRHL*TPPRGAPPCGAGRR
Trigger: CCTGCGCCCCGCGCCGCAAGGTGGCGCTCCTCTTGGAGGTGTGCAGAGATGTCTATGCGGGCCTGGCTCGAGGCGAGAACCAAGATCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000589111.5
ENST00000591812.2
ENST00000593424.5
ENST00000598904.5
ENST00000634655.1
ENST00000634669.1
ENST00000635328.1
ENST00000635542.2
CDS TCA 90 bp GAAACTCTACGTCCAGCTGCGTGTCCCCAATGTCCGGGCTCCAGATaGGTTCCTCGGTCAGCGCCGGCAGGAAGGCGTCGGCCCCCAGGG +
Preference number: 5 (lower is better)
Translates to: ETLRPAACPQCPGSR*VPRSAPAGRRRPPG
Trigger: CCCTGGGGGCCGACGCCTTCCTGCCGGCGCTGACCGAGGAACTCATCTGGAGCCCGGACATTGGGGACACGCAGCTGGACGTAGAGTTTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000589111.5
ENST00000591812.2
ENST00000593424.5
ENST00000593809.1
ENST00000596961.1
ENST00000598904.5
ENST00000634563.1
ENST00000634567.1
ENST00000634655.1
ENST00000634669.1
ENST00000635328.1
ENST00000635542.2
CDS CCA 90 bp TCTTCCTCCTCCTCTTCCAGTAGGCTGGCGAGAGCCGGCCCAGGATaGTCCACTTCCGGGCTGAGCGGGCCTTTCACCCAGGAGACCCCG +
Preference number: 5 (lower is better)
Translates to: SSSSSSSRLARAGPG*STSGLSGPFTQETP
Trigger: CGGGGTCTCCTGGGTGAAAGGCCCGCTCAGCCCGGAAGTGGACCATCCTGGGCCGGCTCTCGCCAGCCTACTGGAAGAGGAGGAGGAAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000589111.5
ENST00000591812.2
ENST00000598904.5
ENST00000634669.1
ENST00000635328.1
ENST00000635542.2
CDS CCA 90 bp AAGGCGCGTAGACACCTTCCATCCGATCCCCAGGACCACGAGGGCTaGCTGCCCCTCCACCTTGTCGGGCATGACAGCGCCTCCTACCAG +
Preference number: 5 (lower is better)
Translates to: KARRHLPSDPQDHEG*LPLHLVGHDSASYQ
Trigger: CTGGTAGGAGGCGCTGTCATGCCCGACAAGGTGGAGGGGCAGCCAGCCCTCGTGGTCCTGGGGATCGGATGGAAGGTGTCTACGCGCCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000596961.1
ENST00000634567.1
CDS GCA 90 bp CGCGTAGACACCTTCCATCCGATCCCCAGGACCACGAGGGCTGGCTaGCCCTCCACCTTGTCGGGCATGACAGCGCCTCCTACCAGAATC +
Preference number: 5 (lower is better)
Translates to: RVDTFHPIPRTTRAG*PSTLSGMTAPPTRI
Trigger: GATTCTGGTAGGAGGCGCTGTCATGCCCGACAAGGTGGAGGGGCAGCCAGCCCTCGTGGTCCTGGGGATCGGATGGAAGGTGTCTACGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000596961.1
ENST00000634567.1
CDS-3UTR CAA 90 bp CCCAGGAAAAGGGAACAGCCTACCTCTGGGCCTTTGCACTGGCTCATCCTGCTTAAGAGGAGCGCCACCTaGCGGCGCGGGGCGCAGGCA +
Preference number: 5 (lower is better)
Translates to: PRKREQPTSGPLHWLILLKRSAT*RRGAQA
Trigger: TGCCTGCGCCCCGCGCCGCAAGGTGGCGCTCCTCTT...AAGCAGGATGAGCCAGTGCAAAGGCCCAGAGGTAGGCTGTTCCCTTTTCCTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000591812.2
ENST00000593424.5
ENST00000634655.1
ENST00000635542.2
CDS-3UTR CAA 90 bp CCCTGTTCCTCAAGCAAGATGCCAGACGTACCTGGGTCAGTCCAGACTCCTGACAAGAGGAGCGCCACCTaGCGGCGCGGGGCGCAGGCA +
Preference number: 5 (lower is better)
Translates to: PCSSSKMPDVPGSVQTPDKRSAT*RRGAQA
Trigger: TGCCTGCGCCCCGCGCCGCAAGGTGGCGCTCCTCTT...GTCAGGAGTCTGGACTGACCCAGGTACGTCTGGCATCTTGCTTGAGGAACAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000591812.2
ENST00000593424.5
ENST00000634655.1
ENST00000635542.2
CDS TCA 90 bp TCCCTTCTACTTGCAGCCAGATGGGCAGTCACCTGGGCTCTGGGATaGTCCTTTCTGTGCAGCGTCCGCCTGCGGTGCCACTGGTGCAGG +
Preference number: 5 (lower is better)
Translates to: SLLLAARWAVTWALG*SFLCSVRLRCHWCR
Trigger: CCTGCACCAGTGGCACCGCAGGCGGACGCTGCACAGAAAGGATCATCCCAGAGCCCAGGTGACTGCCCATCTGGCTGCAAGTAGAAGGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000593424.5
ENST00000634655.1
CDS TCA 90 bp TCCCCAGGACCACGAGGGCTGGCTGCCCCTCCACCTTGTCGGGCATaGCAGCGCCTCCTACCAGAATCTTCAGGACCGCATAGATTCCTC +
Preference number: 5 (lower is better)
Translates to: SPGPRGLAAPPPCRA*QRLLPESSGPHRFL
Trigger: GAGGAATCTATGCGGTCCTGAAGATTCTGGTAGGAGGCGCTGTCATGCCCGACAAGGTGGAGGGGCAGCCAGCCCTCGTGGTCCTGGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000596961.1
ENST00000634567.1
CDS CCA 90 bp CACCCTCCCTTCTACTTGCAGCCAGATGGGCAGTCACCTGGGCTCTaGGATGATCCTTTCTGTGCAGCGTCCGCCTGCGGTGCCACTGGT +
Preference number: 5 (lower is better)
Translates to: HPPFYLQPDGQSPGL*DDPFCAASACGATG
Trigger: ACCAGTGGCACCGCAGGCGGACGCTGCACAGAAAGGATCATCCCAGAGCCCAGGTGACTGCCCATCTGGCTGCAAGTAGAAGGGAGGGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000593424.5
ENST00000634655.1
CDS-3UTR CAA 90 bp GCTCATCCTGCTTCTCGGAATGCTCTTCCTAATACCCACTCTGCTCCTCCCTTCAAGAGGAGCGCCACCTaGCGGCGCGGGGCGCAGGCA +
Preference number: 5 (lower is better)
Translates to: AHPASRNALPNTHSAPPFKRSAT*RRGAQA
Trigger: TGCCTGCGCCCCGCGCCGCAAGGTGGCGCTCCTCTT...GAAGGGAGGAGCAGAGTGGGTATTAGGAAGAGCATTCCGAGAAGCAGGATGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000591812.2
ENST00000593424.5
ENST00000634655.1
ENST00000635542.2
CDS-3UTR CAA 90 bp TGTTCCTCAAGCAAGATGCCAGACGTACCTGGGTCAGTCCAGACTCCTGACCTAAAGAGGAGCGCCACCTaGCGGCGCGGGGCGCAGGCA +
Preference number: 5 (lower is better)
Translates to: CSSSKMPDVPGSVQTPDLKRSAT*RRGAQA
Trigger: TGCCTGCGCCCCGCGCCGCAAGGTGGCGCTCCTCTT...TAGGTCAGGAGTCTGGACTGACCCAGGTACGTCTGGCATCTTGCTTGAGGAACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000591812.2
ENST00000593424.5
ENST00000634655.1
ENST00000635542.2
CDS-3UTR CAA 90 bp CCCAGGAAAAGGGAACAGCCTACCTCTGGGCCTTTGCACTGGCTCATCCTGCTTGGCCCCCAGGGGATCTaGGTTCTCGCCTCGAGCCAG +
Preference number: 5 (lower is better)
Translates to: PRKREQPTSGPLHWLILLGPQGI*VLASSQ
Trigger: CTGGCTCGAGGCGAGAACCAAGATCCCCTGGGGGCC...AAGCAGGATGAGCCAGTGCAAAGGCCCAGAGGTAGGCTGTTCCCTTTTCCTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000591812.2
ENST00000593424.5
ENST00000634655.1
ENST00000635542.2
CDS-3UTR CAA 90 bp CCCTGTTCCTCAAGCAAGATGCCAGACGTACCTGGGTCAGTCCAGACTCCTGACGGCCCCCAGGGGATCTaGGTTCTCGCCTCGAGCCAG +
Preference number: 5 (lower is better)
Translates to: PCSSSKMPDVPGSVQTPDGPQGI*VLASSQ
Trigger: CTGGCTCGAGGCGAGAACCAAGATCCCCTGGGGGCC...GTCAGGAGTCTGGACTGACCCAGGTACGTCTGGCATCTTGCTTGAGGAACAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000591812.2
ENST00000593424.5
ENST00000634655.1
ENST00000635542.2
CDS CCA 90 bp CCCTCCCCCAGCCTCTGTGGGTCTCCAGGTAGAGCTGGTTCACAATaGAAAGCACCTTCCCTGGGGTGTCCTGTTGGACCCTGCCGATCT +
Preference number: 5 (lower is better)
Translates to: PSPSLCGSPGRAGSQ*KAPSLGCPVGPCRS
Trigger: AGATCGGCAGGGTCCAACAGGACACCCCAGGGAAGGTGCTTTCCATTGTGAACCAGCTCTACCTGGAGACCCACAGAGGCTGGGGGAGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000589111.5
ENST00000591812.2
ENST00000598904.5
ENST00000634669.1
ENST00000635328.1
ENST00000635542.2
CDS-3UTR CAA 90 bp CCCAGGAAAAGGGAACAGCCTACCTCTGGGCCTTTGCACTGGCTCATCCTGCTTCCCTGGGGTGTCCTGTaGGACCCTGCCGATCTGCAC +
Preference number: 5 (lower is better)
Translates to: PRKREQPTSGPLHWLILLPWGVL*DPADLH
Trigger: GTGCAGATCGGCAGGGTCCAACAGGACACCCCAGGG...AAGCAGGATGAGCCAGTGCAAAGGCCCAGAGGTAGGCTGTTCCCTTTTCCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000591812.2
ENST00000635542.2
CDS GCA 90 bp GGGAGCTGGGTCAGAAGGGCACCAGGTCTCACCCTCCCTTCTACTTaGAGCCAGATGGGCAGTCACCTGGGCTCTGGGATGATCCTTTCT +
Preference number: 5 (lower is better)
Translates to: GSWVRRAPGLTLPST*SQMGSHLGSGMILS
Trigger: AGAAAGGATCATCCCAGAGCCCAGGTGACTGCCCATCTGGCTGCAAGTAGAAGGGAGGGTGAGACCTGGTGCCCTTCTGACCCAGCTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000593424.5
ENST00000634655.1
CDS-3UTR CAA 90 bp GAGGGGTCCCAGGAAAAGGGAACAGCCTACCTCTGGGCCTTTGCACTGGCTCATGGGGTCCTGTCTGCTTaGTTCACCTGTGGTGGGACC +
Preference number: 5 (lower is better)
Translates to: EGSQEKGTAYLWAFALAHGVLSA*FTCGGT
Trigger: GGTCCCACCACAGGTGAACAAAGCAGACAGGACCCC...ATGAGCCAGTGCAAAGGCCCAGAGGTAGGCTGTTCCCTTTTCCTGGGACCCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000591812.2
ENST00000635542.2
CDS-3UTR CAA 90 bp CAAGCAAGATGCCAGACGTACCTGGGTCAGTCCAGACTCCTGACCTATGTGGTTGGCCCCCAGGGGATCTaGGTTCTCGCCTCGAGCCAG +
Preference number: 5 (lower is better)
Translates to: QARCQTYLGQSRLLTYVVGPQGI*VLASSQ
Trigger: CTGGCTCGAGGCGAGAACCAAGATCCCCTGGGGGCC...AACCACATAGGTCAGGAGTCTGGACTGACCCAGGTACGTCTGGCATCTTGCTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000591812.2
ENST00000593424.5
ENST00000634655.1
ENST00000635542.2
CDS TCA 90 bp CTGTTGGACCCTGCCGATCTGCACAGGATCTGGAGCCAGCAGAAGTaGGAAGGTGTCCTAGGTATCCAAGGGACCAACCCTGGTCCCCTC +
Preference number: 5 (lower is better)
Translates to: LLDPADLHRIWSQQK*EGVLGIQGTNPGPL
Trigger: GAGGGGACCAGGGTTGGTCCCTTGGATACCTAGGACACCTTCTCACTTCTGCTGGCTCCAGATCCTGTGCAGATCGGCAGGGTCCAACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000589111.5
ENST00000634669.1
CDS GCA 90 bp CCCAGGACCCCTGCTTCCAAAGACAGCCCTGATGTAGGAGTCCTTTaGCAGGTGATCCTGGAGGTCAGTAAGGAGGTGCCGCACATCCTG +
Preference number: 5 (lower is better)
Translates to: PRTPASKDSPDVGVL*QVILEVSKEVPHIL
Trigger: CAGGATGTGCGGCACCTCCTTACTGACCTCCAGGATCACCTGGCAAAGGACTCCTACATCAGGGCTGTCTTTGGAAGCAGGGGTCCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000589111.5
ENST00000591812.2
ENST00000598904.5
ENST00000634669.1
ENST00000635328.1
ENST00000635542.2
CDS-3UTR CAA 90 bp GAGGGGTCCCAGGAAAAGGGAACAGCCTACCTCTGGGCCTTTGCACTGGCTCATTGGGCCATCGTCAGGTaGCAGGAAGCCAGTGAGTCA +
Preference number: 5 (lower is better)
Translates to: EGSQEKGTAYLWAFALAHWAIVR*QEASES
Trigger: TGACTCACTGGCTTCCTGCAACCTGACGATGGCCCA...ATGAGCCAGTGCAAAGGCCCAGAGGTAGGCTGTTCCCTTTTCCTGGGACCCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000591812.2
ENST00000635542.2
CDS-3UTR CAA 90 bp CCCTGTTCCTCAAGCAAGATGCCAGACGTACCTGGGTCAGTCCAGACTCCTGACGGGACTTCAGGTGCCTaGTCTTCTGGCTGGGCCATC +
Preference number: 5 (lower is better)
Translates to: PCSSSKMPDVPGSVQTPDGTSGA*SSGWAI
Trigger: GATGGCCCAGCCAGAAGACAAGGCACCTGAAGTCCC...GTCAGGAGTCTGGACTGACCCAGGTACGTCTGGCATCTTGCTTGAGGAACAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000591812.2
ENST00000635542.2
CDS GCA 90 bp GGTGTGAAACCCCTAGTTGTCACTGGTCCCTGTCACAGTCTCTTCTaGCCATGGCTCCTTAAAGGGCAGGTTGGCCTGTGGGGAGAGGTG +
Preference number: 5 (lower is better)
Translates to: GVKPLVVTGPCHSLF*PWLLKGQVGLWGEV
Trigger: CACCTCTCCCCACAGGCCAACCTGCCCTTTAAGGAGCCATGGGCAGAAGAGACTGTGACAGGGACCAGTGACAACTAGGGGTTTCACACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000593424.5
ENST00000634655.1
CDS CCA 90 bp GTTCTGGGCAGAACATCCCTGCTGGCTGATAGAAAGGCCAGGAGATaGGGCAGGTCTGGCATGCAGAGGTTGGAGGATTCCAGGGACACA +
Preference number: 5 (lower is better)
Translates to: VLGRTSLLADRKARR*GRSGMQRLEDSRDT
Trigger: TGTGTCCCTGGAATCCTCCAACCTCTGCATGCCAGACCTGCCCCATCTCCTGGCCTTTCTATCAGCCAGCAGGGATGTTCTGCCCAGAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000591812.2
ENST00000598904.5
ENST00000635328.1
ENST00000635542.2
CDS CCA 90 bp GTGGGTCTCCAGGTAGAGCTGGTTCACAATGGAAAGCACCTTCCCTaGGGTGTCCTGTTGGACCCTGCCGATCTGCACAGGATCTGTGTG +
Preference number: 5 (lower is better)
Translates to: VGLQVELVHNGKHLP*GVLLDPADLHRICV
Trigger: CACACAGATCCTGTGCAGATCGGCAGGGTCCAACAGGACACCCCAGGGAAGGTGCTTTCCATTGTGAACCAGCTCTACCTGGAGACCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000591812.2
ENST00000598904.5
ENST00000635328.1
ENST00000635542.2
CDS CCA 90 bp CAGATGGGTGACCTGTACCTGCTGGCTGATAGAAAGGCCAGGAGATaGGGCAGGTCTGGCATGCAGAGGTTGGAGGATTCCAGGGACACA +
Preference number: 5 (lower is better)
Translates to: QMGDLYLLADRKARR*GRSGMQRLEDSRDT
Trigger: TGTGTCCCTGGAATCCTCCAACCTCTGCATGCCAGACCTGCCCCATCTCCTGGCCTTTCTATCAGCCAGCAGGTACAGGTCACCCATCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000589111.5
ENST00000596919.5
ENST00000634669.1
ENST00000634936.1
CDS-3UTR CAA 90 bp CAGCCTACCTCTGGGCCTTTGCACTGGCTCATCCTGCTTCTCGGAATGCTCTTCAGGCAGGGGGCTTGTTaGAGCCAGGAGGTTAAGGCT +
Preference number: 5 (lower is better)
Translates to: QPTSGPLHWLILLLGMLFRQGAC*SQEVKA
Trigger: AGCCTTAACCTCCTGGCTCAAACAAGCCCCCTGCCT...GAAGAGCATTCCGAGAAGCAGGATGAGCCAGTGCAAAGGCCCAGAGGTAGGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000591812.2
ENST00000593424.5
ENST00000634655.1
ENST00000635542.2
CDS-3UTR CAA 90 bp CCCAGGAAAAGGGAACAGCCTACCTCTGGGCCTTTGCACTGGCTCATCCTGCTTAGGCAGGGGGCTTGTTaGAGCCAGGAGGTTAAGGCT +
Preference number: 5 (lower is better)
Translates to: PRKREQPTSGPLHWLILLRQGAC*SQEVKA
Trigger: AGCCTTAACCTCCTGGCTCAAACAAGCCCCCTGCCT...AAGCAGGATGAGCCAGTGCAAAGGCCCAGAGGTAGGCTGTTCCCTTTTCCTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000591812.2
ENST00000593424.5
ENST00000634655.1
ENST00000635542.2
CDS-3UTR CAA 90 bp CCCAGGAAAAGGGAACAGCCTACCTCTGGGCCTTTGCACTGGCTCATCCTGCTTTGTAGTCTCAGCTACTaGGTAGGCAGAGGCAGGGGG +
Preference number: 5 (lower is better)
Translates to: PRKREQPTSGPLHWLILLCSLSY*VGRGRG
Trigger: CCCCCTGCCTCTGCCTACCAAGTAGCTGAGACTACA...AAGCAGGATGAGCCAGTGCAAAGGCCCAGAGGTAGGCTGTTCCCTTTTCCTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000591812.2
ENST00000593424.5
ENST00000634655.1
ENST00000635542.2
CDS-3UTR CAA 90 bp CCCTGTTCCTCAAGCAAGATGCCAGACGTACCTGGGTCAGTCCAGACTCCTGACTGTAGTCTCAGCTACTaGGTAGGCAGAGGCAGGGGG +
Preference number: 5 (lower is better)
Translates to: PCSSSKMPDVPGSVQTPDCSLSY*VGRGRG
Trigger: CCCCCTGCCTCTGCCTACCAAGTAGCTGAGACTACA...GTCAGGAGTCTGGACTGACCCAGGTACGTCTGGCATCTTGCTTGAGGAACAGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000591812.2
ENST00000593424.5
ENST00000634655.1
ENST00000635542.2
CDS CCA 90 bp GTATTGACTTCTCCTGGTAAAGGTCCTGACCTCAACACCAGGGCCTaGCTGGGGTCACGTCCTGTGACCAAGAAACTCCCTAGTGGCCAC +
Preference number: 5 (lower is better)
Translates to: VLTSPGKGPDLNTRA*LGSRPVTKKLPSGH
Trigger: GTGGCCACTAGGGAGTTTCTTGGTCACAGGACGTGACCCCAGCCAGGCCCTGGTGTTGAGGTCAGGACCTTTACCAGGAGAAGTCAATAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000591812.2
ENST00000598048.1
ENST00000598904.5
ENST00000599911.1
ENST00000634378.1
ENST00000635119.1
ENST00000635328.1
ENST00000635542.2
CDS CCA 90 bp CCAGCAGAAGTGAGAAGGTGTCCTAGGTATCCAAGGGACCAACCCTaGTCCCCTCAAGGCGCCAGGAGACTTACTTCCCAGCTTCATTGC +
Preference number: 5 (lower is better)
Translates to: PAEVRRCPRYPRDQP*SPQGARRLTSQLHC
Trigger: GCAATGAAGCTGGGAAGTAAGTCTCCTGGCGCCTTGAGGGGACCAGGGTTGGTCCCTTGGATACCTAGGACACCTTCTCACTTCTGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000589111.5
ENST00000634669.1
CDS-3UTR CAA 90 bp TGTTCCTCAAGCAAGATGCCAGACGTACCTGGGTCAGTCCAGACTCCTGACCTAGGGACTTCAGGTGCCTaGTCTTCTGGCTGGGCCATC +
Preference number: 5 (lower is better)
Translates to: CSSSKMPDVPGSVQTPDLGTSGA*SSGWAI
Trigger: GATGGCCCAGCCAGAAGACAAGGCACCTGAAGTCCC...TAGGTCAGGAGTCTGGACTGACCCAGGTACGTCTGGCATCTTGCTTGAGGAACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000591812.2
ENST00000635542.2
CDS-3UTR CAA 90 bp TCAGTCCAGACTCCTGACCTATGTGGTTTAGGAGCAGCAAGGAGGAGGGAGGGGTCTGGCATGCAGAGGTaGGAGGATTCCAGGGACACA +
Preference number: 5 (lower is better)
Translates to: SVQTPDLCGLGAARRREGSGMQR*EDSRDT
Trigger: TGTGTCCCTGGAATCCTCCAACCTCTGCATGCCAGA...CCCCTCCCTCCTCCTTGCTGCTCCTAAACCACATAGGTCAGGAGTCTGGACTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000591812.2
ENST00000635542.2
CDS-3UTR CAA 90 bp GTCACCTCAGTGAGGCTTTCTCTGATACGCCTGTCTAAAACTGCAAAGCCTCCTCCCTGGGGTGTCCTGTaGGACCCTGCCGATCTGCAC +
Preference number: 5 (lower is better)
Translates to: VTSVRLSLIRLSKTAKPPPWGVL*DPADLH
Trigger: GTGCAGATCGGCAGGGTCCAACAGGACACCCCAGGG...AGGAGGCTTTGCAGTTTTAGACAGGCGTATCAGAGAAAGCCTCACTGAGGTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000591812.2
ENST00000635542.2
CDS-3UTR CAA 90 bp CCCAGGAAAAGGGAACAGCCTACCTCTGGGCCTTTGCACTGGCTCATCCTGCTTGAAAAACGATCACAATaGGGCACGGTGGCTCACGCC +
Preference number: 5 (lower is better)
Translates to: PRKREQPTSGPLHWLILLEKRSQ*GTVAHA
Trigger: GGCGTGAGCCACCGTGCCCAATTGTGATCGTTTTTC...AAGCAGGATGAGCCAGTGCAAAGGCCCAGAGGTAGGCTGTTCCCTTTTCCTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000591812.2
ENST00000593424.5
ENST00000634655.1
ENST00000635542.2
CDS CCA 90 bp AGTCTGGGCCCCAAAGCCCCATTCATTCCCTTGGAGCAAGGAAATTaGCAGGTTGGCTGTGCCCTCTTTAGAGAACCGTGCCTCACCTGT +
Preference number: 5 (lower is better)
Translates to: SLGPKAPFIPLEQGN*QVGCALFREPCLTC
Trigger: ACAGGTGAGGCACGGTTCTCTAAAGAGGGCACAGCCAACCTGCCAATTTCCTTGCTCCAAGGGAATGAATGGGGCTTTGGGGCCCAGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000589111.5
ENST00000596919.5
ENST00000634669.1
ENST00000634936.1
CDS CCA 90 bp GTATTGACTTCTCCTGGTAAAGGTCCTGACCTCAACACCAGGGCCTaGCTGGGGTCACGTCCTGTGACCAAGAAACTCTGTTCTCGGAGG +
Preference number: 5 (lower is better)
Translates to: VLTSPGKGPDLNTRA*LGSRPVTKKLCSRR
Trigger: CCTCCGAGAACAGAGTTTCTTGGTCACAGGACGTGACCCCAGCCAGGCCCTGGTGTTGAGGTCAGGACCTTTACCAGGAGAAGTCAATAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000596919.5
ENST00000634936.1
CDS-3UTR CAA 90 bp GCTCATCCTGCTTCTCGGAATGCTCTTCCTAATACCCACTCTGCTCCTCCCTTCTGGGCCATCGTCAGGTaGCAGGAAGCCAGTGAGTCA +
Preference number: 5 (lower is better)
Translates to: AHPASRNALPNTHSAPPFWAIVR*QEASES
Trigger: TGACTCACTGGCTTCCTGCAACCTGACGATGGCCCA...GAAGGGAGGAGCAGAGTGGGTATTAGGAAGAGCATTCCGAGAAGCAGGATGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000591812.2
ENST00000635542.2
CDS-3UTR CAA 90 bp GCTCATCCTGCTTCTCGGAATGCTCTTCCTAATACCCACTCTGCTCCTCCCTTCAGGCAGGGGGCTTGTTaGAGCCAGGAGGTTAAGGCT +
Preference number: 5 (lower is better)
Translates to: AHPASRNALPNTHSAPPFRQGAC*SQEVKA
Trigger: AGCCTTAACCTCCTGGCTCAAACAAGCCCCCTGCCT...GAAGGGAGGAGCAGAGTGGGTATTAGGAAGAGCATTCCGAGAAGCAGGATGAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000591812.2
ENST00000593424.5
ENST00000634655.1
ENST00000635542.2
CDS-3UTR CAA 90 bp CAAGCAAGATGCCAGACGTACCTGGGTCAGTCCAGACTCCTGACCTATGTGGTTAGGCAGGGGGCTTGTTaGAGCCAGGAGGTTAAGGCT +
Preference number: 5 (lower is better)
Translates to: QARCQTYLGQSRLLTYVVRQGAC*SQEVKA
Trigger: AGCCTTAACCTCCTGGCTCAAACAAGCCCCCTGCCT...AACCACATAGGTCAGGAGTCTGGACTGACCCAGGTACGTCTGGCATCTTGCTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000591812.2
ENST00000593424.5
ENST00000634655.1
ENST00000635542.2
CDS-3UTR CAA 90 bp GCTCATCCTGCTTCTCGGAATGCTCTTCCTAATACCCACTCTGCTCCTCCCTTCTGTAGTCTCAGCTACTaGGTAGGCAGAGGCAGGGGG +
Preference number: 5 (lower is better)
Translates to: AHPASRNALPNTHSAPPFCSLSY*VGRGRG
Trigger: CCCCCTGCCTCTGCCTACCAAGTAGCTGAGACTACA...GAAGGGAGGAGCAGAGTGGGTATTAGGAAGAGCATTCCGAGAAGCAGGATGAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000591812.2
ENST00000593424.5
ENST00000634655.1
ENST00000635542.2
CDS GCA 90 bp AGCTCATCTGGATCTAAGAGCTCCATAAGAAACTCTACGTCCAGCTaGGTGTCCCCAATGTCCGGGCTCCAGATGAGTTCCTCGGTCAGC +
Preference number: 5 (lower is better)
Translates to: SSSGSKSSIRNSTSS*VSPMSGLQMSSSVS
Trigger: GCTGACCGAGGAACTCATCTGGAGCCCGGACATTGGGGACACGCAGCTGGACGTAGAGTTTCTTATGGAGCTCTTAGATCCAGATGAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000589111.5
ENST00000591812.2
ENST00000593424.5
ENST00000593809.1
ENST00000596961.1
ENST00000598904.5
ENST00000634563.1
ENST00000634567.1
ENST00000634655.1
ENST00000634669.1
ENST00000635328.1
ENST00000635542.2
CDS CCA 90 bp GCGCCGGTCCAGCTGATAGTTCTTAGTGATCAATTGACTGTGGGCTaGAACCTCAGGGGAGGTGCCTTACCTCTGGGAATCTTCTGGATC +
Preference number: 5 (lower is better)
Translates to: APVQLIVLSDQLTVG*NLRGGALPLGIFWI
Trigger: GATCCAGAAGATTCCCAGAGGTAAGGCACCTCCCCTGAGGTTCCAGCCCACAGTCAATTGATCACTAAGAACTATCAGCTGGACCGGCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599911.1
ENST00000635119.1
CDS-3UTR CAA 90 bp CAAGCAAGATGCCAGACGTACCTGGGTCAGTCCAGACTCCTGACCTATGTGGTTGAAAAACGATCACAATaGGGCACGGTGGCTCACGCC +
Preference number: 5 (lower is better)
Translates to: QARCQTYLGQSRLLTYVVEKRSQ*GTVAHA
Trigger: GGCGTGAGCCACCGTGCCCAATTGTGATCGTTTTTC...AACCACATAGGTCAGGAGTCTGGACTGACCCAGGTACGTCTGGCATCTTGCTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000591812.2
ENST00000593424.5
ENST00000634655.1
ENST00000635542.2
CDS CCA 90 bp TCCTCAAACCCAGTAGTCTGGGCCCCAAAGCCCCATTCATTCCCTTaGAGCAAGGAAATTGGCAGGTTGGCTGTGCCCTCTTTAGAGAAC +
Preference number: 5 (lower is better)
Translates to: SSNPVVWAPKPHSFP*SKEIGRLAVPSLEN
Trigger: GTTCTCTAAAGAGGGCACAGCCAACCTGCCAATTTCCTTGCTCCAAGGGAATGAATGGGGCTTTGGGGCCCAGACTACTGGGTTTGAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000589111.5
ENST00000596919.5
ENST00000634669.1
ENST00000634936.1
CDS-3UTR CAA 90 bp GTCACCTCAGTGAGGCTTTCTCTGATACGCCTGTCTAAAACTGCAAAGCCTCCTTCTGGCATGCAGAGGTaGGAGGATTCCAGGGACACA +
Preference number: 5 (lower is better)
Translates to: VTSVRLSLIRLSKTAKPPSGMQR*EDSRDT
Trigger: TGTGTCCCTGGAATCCTCCAACCTCTGCATGCCAGA...AGGAGGCTTTGCAGTTTTAGACAGGCGTATCAGAGAAAGCCTCACTGAGGTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000591812.2
ENST00000635542.2
CDS CCA 90 bp CTCTCTCTAGTCTCCAGTTCTATATTCTCCTCAAACCCAGTAGTCTaGGCCCCAAAGCCCCATTCATTCCCTTGGAGCAAGGAAATTGGC +
Preference number: 5 (lower is better)
Translates to: LSLVSSSIFSSNPVV*APKPHSFPWSKEIG
Trigger: GCCAATTTCCTTGCTCCAAGGGAATGAATGGGGCTTTGGGGCCCAGACTACTGGGTTTGAGGAGAATATAGAACTGGAGACTAGAGAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000589111.5
ENST00000596919.5
ENST00000634669.1
ENST00000634936.1
CDS CCA 72 bp AGGAGCGCCACCTTGCGGCGCGGGGCGCAGGCAGCGTaGAGGTGCGCAAGGCGCTCGTGGATGCGGCTCCGC +
Preference number: 6 (lower is better)
Translates to: RSATLRRGAQAA*RCARRSWMRLR
Trigger: GCGGAGCCGCATCCACGAGCGCCTTGCGCACCTCCACGCTGCCTGCGCCCCGCGCCGCAAGGTGGCGCTCCT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000589111.5
ENST00000591812.2
ENST00000598904.5
ENST00000634669.1
ENST00000635328.1
ENST00000635542.2
CDS GCA 72 bp GGCTGTCTGTCGCCGCCGCAGCCGCCGCAGCTCCGGTaGTCGGAGTGTGCGGAGTCGTGTCCACAGGGCCGG +
Preference number: 6 (lower is better)
Translates to: GCLSPPQPPQLR*SECAESCPQGR
Trigger: CCGGCCCTGTGGACACGACTCCGCACACTCCGAGCACCGGAGCTGCGGCGGCTGCGGCGGCGACAGACAGCC
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000589111.5
ENST00000591812.2
ENST00000598904.5
ENST00000634669.1
ENST00000635328.1
ENST00000635542.2
CDS GCA 72 bp TCCTTTCTGTGCAGCGTCCGCCTGCGGTGCCACTGGTaGAGGGAGGCGCGGGCCTCGGAGCTGAGCCCCCGG +
Preference number: 6 (lower is better)
Translates to: SFLCSVRLRCHW*REARASELSPR
Trigger: CCGGGGGCTCAGCTCCGAGGCCCGCGCCTCCCTGCACCAGTGGCACCGCAGGCGGACGCTGCACAGAAAGGA
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000589111.5
ENST00000591812.2
ENST00000593424.5
ENST00000596961.1
ENST00000598904.5
ENST00000634567.1
ENST00000634655.1
ENST00000634669.1
ENST00000635328.1
ENST00000635542.2
CDS TCA 72 bp TGGCGAGAGCCGGCCCAGGATGGTCCACTTCCGGGCTaGGCGGGCCTTTCACCCAGGAGACCCCGTGAGGCG +
Preference number: 6 (lower is better)
Translates to: WREPAQDGPLPG*AGLSPRRPREA
Trigger: CGCCTCACGGGGTCTCCTGGGTGAAAGGCCCGCTCAGCCCGGAAGTGGACCATCCTGGGCCGGCTCTCGCCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000589111.5
ENST00000591812.2
ENST00000598904.5
ENST00000634669.1
ENST00000635328.1
ENST00000635542.2
CDS GCA 72 bp GGGCTCTGGGATGATCCTTTCTGTGCAGCGTCCGCCTaGGGTGCCACTGGTGCAGGGAGGCGCGGGCCTCGG +
Preference number: 6 (lower is better)
Translates to: GLWDDPFCAASA*GATGAGRRGPR
Trigger: CCGAGGCCCGCGCCTCCCTGCACCAGTGGCACCGCAGGCGGACGCTGCACAGAAAGGATCATCCCAGAGCCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000589111.5
ENST00000591812.2
ENST00000593424.5
ENST00000596961.1
ENST00000598904.5
ENST00000634567.1
ENST00000634655.1
ENST00000634669.1
ENST00000635328.1
ENST00000635542.2
CDS TCA 72 bp TCCGGGCTGAGCGGGCCTTTCACCCAGGAGACCCCGTaGGGCGCAGGGTTCCTGGGGGCTGGATCATGTCTC +
Preference number: 6 (lower is better)
Translates to: SGLSGPFTQETP*GAGFLGAGSCL
Trigger: GAGACATGATCCAGCCCCCAGGAACCCTGCGCCTCACGGGGTCTCCTGGGTGAAAGGCCCGCTCAGCCCGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000589111.5
ENST00000591812.2
ENST00000598904.5
ENST00000634669.1
ENST00000635328.1
ENST00000635542.2
CDS TCA 72 bp CGTCCAGCTGCGTGTCCCCAATGTCCGGGCTCCAGATaGGTTCCTCGGTCAGCGCCGGCAGGAAGGCGTCGG +
Preference number: 6 (lower is better)
Translates to: RPAACPQCPGSR*VPRSAPAGRRR
Trigger: CCGACGCCTTCCTGCCGGCGCTGACCGAGGAACTCATCTGGAGCCCGGACATTGGGGACACGCAGCTGGACG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000589111.5
ENST00000591812.2
ENST00000593424.5
ENST00000593809.1
ENST00000596961.1
ENST00000598904.5
ENST00000634563.1
ENST00000634567.1
ENST00000634655.1
ENST00000634669.1
ENST00000635328.1
ENST00000635542.2
CDS GCA 72 bp AGACATCTCTGCACACCTCCAAGAGGAGCGCCACCTTaGGGCGCGGGGCGCAGGCAGCGTGGAGGTGCGCAA +
Preference number: 6 (lower is better)
Translates to: RHLCTPPRGAPP*GAGRRQRGGAQ
Trigger: TTGCGCACCTCCACGCTGCCTGCGCCCCGCGCCGCAAGGTGGCGCTCCTCTTGGAGGTGTGCAGAGATGTCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000589111.5
ENST00000591812.2
ENST00000598904.5
ENST00000634669.1
ENST00000635328.1
ENST00000635542.2
CDS CCA 72 bp CCGTCTCCAGCGCGGGGCCTGGATCCTCGTCCTTCTTaGGGAGCCCAGGACCCCTGCTTCCAAAGACAGCCC +
Preference number: 6 (lower is better)
Translates to: PSPARGLDPRPS*GAQDPCFQRQP
Trigger: GGGCTGTCTTTGGAAGCAGGGGTCCTGGGCTCCCCAAGAAGGACGAGGATCCAGGCCCCGCGCTGGAGACGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000589111.5
ENST00000591812.2
ENST00000598904.5
ENST00000634669.1
ENST00000635328.1
ENST00000635542.2
CDS GCA 72 bp GGTTCTCGCCTCGAGCCAGGCCCGCATAGACATCTCTaGACACCTCCAAGAGGAGCGCCACCTTGCGGCGCG +
Preference number: 6 (lower is better)
Translates to: GSRLEPGPHRHL*TPPRGAPPCGA
Trigger: CGCGCCGCAAGGTGGCGCTCCTCTTGGAGGTGTGCAGAGATGTCTATGCGGGCCTGGCTCGAGGCGAGAACC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000589111.5
ENST00000591812.2
ENST00000593424.5
ENST00000598904.5
ENST00000634655.1
ENST00000634669.1
ENST00000635328.1
ENST00000635542.2
CDS GCA 72 bp ACCTTCCATCCGATCCCCAGGACCACGAGGGCTGGCTaGCCCTCCACCTTGTCGGGCATGACAGCGCCTCCT +
Preference number: 6 (lower is better)
Translates to: TFHPIPRTTRAG*PSTLSGMTAPP
Trigger: AGGAGGCGCTGTCATGCCCGACAAGGTGGAGGGGCAGCCAGCCCTCGTGGTCCTGGGGATCGGATGGAAGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000596961.1
ENST00000634567.1
CDS CCA 72 bp TCCTCTTCCAGTAGGCTGGCGAGAGCCGGCCCAGGATaGTCCACTTCCGGGCTGAGCGGGCCTTTCACCCAG +
Preference number: 6 (lower is better)
Translates to: SSSSRLARAGPG*STSGLSGPFTQ
Trigger: CTGGGTGAAAGGCCCGCTCAGCCCGGAAGTGGACCATCCTGGGCCGGCTCTCGCCAGCCTACTGGAAGAGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000589111.5
ENST00000591812.2
ENST00000598904.5
ENST00000634669.1
ENST00000635328.1
ENST00000635542.2
CDS CCA 72 bp AGACACCTTCCATCCGATCCCCAGGACCACGAGGGCTaGCTGCCCCTCCACCTTGTCGGGCATGACAGCGCC +
Preference number: 6 (lower is better)
Translates to: RHLPSDPQDHEG*LPLHLVGHDSA
Trigger: GGCGCTGTCATGCCCGACAAGGTGGAGGGGCAGCCAGCCCTCGTGGTCCTGGGGATCGGATGGAAGGTGTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000596961.1
ENST00000634567.1
CDS CAA 90 bp TTCCATCCGATCCCCAGGACCACGAGGGCTGGCTGCCCCTCCACCTaGTCGGGCATGACAGCGCCTCCTACCAGAATCTTCAGGACCGCA +
Preference number: 6 (lower is better)
Translates to: FHPIPRTTRAGCPST*SGMTAPPTRIFRTA
Trigger: TGCGGTCCTGAAGATTCTGGTAGGAGGCGCTGTCATGCCCGACAAGGTGGAGGGGCAGCCAGCCCTCGTGGTCCTGGGGATCGGATGGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000596961.1
ENST00000634567.1
CDS CAA 90 bp TGTGGTGGGACCAGCCTCACCCCCTCTGTGGGGACTTCAGGTGCCTaGTCTTCTGGCTGGGCCATCGTCAGGTTGCAGGAAGCCAGTGAG +
Preference number: 6 (lower is better)
Translates to: CGGTSLTPSVGTSGA*SSGWAIVRLQEASE
Trigger: CTCACTGGCTTCCTGCAACCTGACGATGGCCCAGCCAGAAGACAAGGCACCTGAAGTCCCCACAGAGGGGGTGAGGCTGGTCCCACCACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000589111.5
ENST00000591812.2
ENST00000634669.1
ENST00000635542.2
CDS CCA 72 bp TTCCTTCAAGGTCTTCCTCCTCCTCTTCCAGTAGGCTaGCGAGAGCCGGCCCAGGATGGTCCACTTCCGGGC +
Preference number: 6 (lower is better)
Translates to: FLQGLPPPLPVG*REPAQDGPLPG
Trigger: GCCCGGAAGTGGACCATCCTGGGCCGGCTCTCGCCAGCCTACTGGAAGAGGAGGAGGAAGACCTTGAAGGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000589111.5
ENST00000591812.2
ENST00000598904.5
ENST00000634669.1
ENST00000635328.1
ENST00000635542.2
CDS CCA 72 bp GGTAGTGGGCAATGTGGTGCAGCGCCCCAAACCACGTaGTCAGGTAGTACCCAGCCTCTCCCCGCAGCTCAT +
Preference number: 6 (lower is better)
Translates to: GSGQCGAAPQTT*SGSTQPLPAAH
Trigger: ATGAGCTGCGGGGAGAGGCTGGGTACTACCTGACCACGTGGTTTGGGGCGCTGCACCACATTGCCCACTACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000589111.5
ENST00000591812.2
ENST00000593424.5
ENST00000593809.1
ENST00000596961.1
ENST00000598904.5
ENST00000634563.1
ENST00000634567.1
ENST00000634655.1
ENST00000634669.1
ENST00000635328.1
ENST00000635542.2
CDS CAA 90 bp ACCCTGGTCCCCTCAAGGCGCCAGGAGACTTACTTCCCAGCTTCATaGCTGGAGGTGCTGAGGCTTAGCTCCTGGCCCCTCCTCAGTCAG +
Preference number: 6 (lower is better)
Translates to: TLVPSRRQETYFPAS*LEVLRLSSWPLLSQ
Trigger: CTGACTGAGGAGGGGCCAGGAGCTAAGCCTCAGCACCTCCAGCAATGAAGCTGGGAAGTAAGTCTCCTGGCGCCTTGAGGGGACCAGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000589111.5
ENST00000634669.1
CDS TCA 72 bp TGGGGAGCCCAGGACCCCTGCTTCCAAAGACAGCCCTaGTGTAGGAGTCCTTTGCCAGGTGATCCCGAAGGC +
Preference number: 6 (lower is better)
Translates to: WGAQDPCFQRQP*CRSPLPGDPEG
Trigger: GCCTTCGGGATCACCTGGCAAAGGACTCCTACATCAGGGCTGTCTTTGGAAGCAGGGGTCCTGGGCTCCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000602238.1
ENST00000635411.1
CDS GCA 72 bp GTCAGAAGGGCACCAGGTCTCACCCTCCCTTCTACTTaGAGCCAGATGGGCAGTCACCTGGGCTCTGGGATG +
Preference number: 6 (lower is better)
Translates to: VRRAPGLTLPST*SQMGSHLGSGM
Trigger: CATCCCAGAGCCCAGGTGACTGCCCATCTGGCTGCAAGTAGAAGGGAGGGTGAGACCTGGTGCCCTTCTGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000593424.5
ENST00000634655.1
CDS CCA 72 bp TCTGCTTTGTTCACCTGTGGTGGGACCAGCCTGGGATaGACAGTGTCCAGGGAGTCAGGGGTCAGAGGTGGG +
Preference number: 6 (lower is better)
Translates to: SALFTCGGTSLG*TVSRESGVRGG
Trigger: CCCACCTCTGACCCCTGACTCCCTGGACACTGTCCATCCCAGGCTGGTCCCACCACAGGTGAACAAAGCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000598048.1
ENST00000634378.1
CDS CAA 72 bp AAGGCCAGGAGATGGGGCAGGTCTGGCATGCAGAGGTaGGAGGATTCCAGGGACACACCCCTAGTGGCCACA +
Preference number: 6 (lower is better)
Translates to: KARRWGRSGMQR*EDSRDTPLVAT
Trigger: TGTGGCCACTAGGGGTGTGTCCCTGGAATCCTCCAACCTCTGCATGCCAGACCTGCCCCATCTCCTGGCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000589111.5
ENST00000634669.1
CDS CAA 72 bp CCTCACCTCACCCCCTCTGTGGGGACTTCAGGTGCCTaGTCTTCTGGCTGGGCCATCGTCAGGTTGCAGGAA +
Preference number: 6 (lower is better)
Translates to: PHLTPSVGTSGA*SSGWAIVRLQE
Trigger: TTCCTGCAACCTGACGATGGCCCAGCCAGAAGACAAGGCACCTGAAGTCCCCACAGAGGGGGTGAGGTGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000598048.1
ENST00000634378.1
CDS CAA 72 bp AGGGTGCTGAGGACCCCTAGAGGGGTCCTGTCTGCTTaGTTCACCTGTGGTGGGACCAGCCTGGGATGGACA +
Preference number: 6 (lower is better)
Translates to: RVLRTPRGVLSA*FTCGGTSLGWT
Trigger: TGTCCATCCCAGGCTGGTCCCACCACAGGTGAACAAAGCAGACAGGACCCCTCTAGGGGTCCTCAGCACCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000598048.1
ENST00000634378.1
CDS CAA 90 bp TGGGAGCTGGGTCAGAAGGGCACCAGGTCTCACCCTCCCTTCTACTaGCAGCCAGATGGGCAGTCACCTGGGCTCTGGGATGATCCTTTC +
Preference number: 6 (lower is better)
Translates to: WELGQKGTRSHPPFY*QPDGQSPGLWDDPF
Trigger: GAAAGGATCATCCCAGAGCCCAGGTGACTGCCCATCTGGCTGCAAGTAGAAGGGAGGGTGAGACCTGGTGCCCTTCTGACCCAGCTCCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000593424.5
ENST00000634655.1
CDS TCA 72 bp TTCTGGCTGGGCCATCGTCAGGTTGCAGGAAGCCAGTaGGTCATGACCTGGCCTCTGTTCTCGGAGGAGAGG +
Preference number: 6 (lower is better)
Translates to: FWLGHRQVAGSQ*VMTWPLFSEER
Trigger: CCTCTCCTCCGAGAACAGAGGCCAGGTCATGACTCACTGGCTTCCTGCAACCTGACGATGGCCCAGCCAGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000589111.5
ENST00000591812.2
ENST00000598048.1
ENST00000599911.1
ENST00000634378.1
ENST00000634669.1
ENST00000635119.1
ENST00000635542.2
CDS TCA 72 bp TGGGGAGCCCAGGACCCCTGCTTCCAAAGACAGCCCTaGTGTAGGAGTCCTTTGCCAGGTGATCCTGGAGGT +
Preference number: 6 (lower is better)
Translates to: WGAQDPCFQRQP*CRSPLPGDPGG
Trigger: ACCTCCAGGATCACCTGGCAAAGGACTCCTACATCAGGGCTGTCTTTGGAAGCAGGGGTCCTGGGCTCCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000589111.5
ENST00000591812.2
ENST00000598904.5
ENST00000634669.1
ENST00000635328.1
ENST00000635542.2
CDS GCA 72 bp CCCCTAGTTGTCACTGGTCCCTGTCACAGTCTCTTCTaGCCATGGCTCCTTAAAGGGCAGGTTGGCCTGGGC +
Preference number: 6 (lower is better)
Translates to: PLVVTGPCHSLF*PWLLKGQVGLG
Trigger: GCCCAGGCCAACCTGCCCTTTAAGGAGCCATGGGCAGAAGAGACTGTGACAGGGACCAGTGACAACTAGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000589111.5
ENST00000591812.2
ENST00000598904.5
ENST00000634669.1
ENST00000635328.1
ENST00000635542.2
CDS GCA 72 bp TGGAAAGCACCTTCCCTGGGGTGTCCTGTTGGACCCTaGCGATCTGCACAGGATCTGGAGCCAGCAGAAGTG +
Preference number: 6 (lower is better)
Translates to: WKAPSLGCPVGP*RSAQDLEPAEV
Trigger: CACTTCTGCTGGCTCCAGATCCTGTGCAGATCGGCAGGGTCCAACAGGACACCCCAGGGAAGGTGCTTTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000589111.5
ENST00000634669.1
CDS CCA 72 bp TCCTGTCTGCTTTGTTCACCTGTGGTGGGACCAGCCTaGGATGGACAGTGTCCAGGGAGTCAGGGGTCAGAG +
Preference number: 6 (lower is better)
Translates to: SCLLCSPVVGPA*DGQCPGSQGSE
Trigger: CTCTGACCCCTGACTCCCTGGACACTGTCCATCCCAGGCTGGTCCCACCACAGGTGAACAAAGCAGACAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000598048.1
ENST00000634378.1
CDS GCA 72 bp CCCCTAGTTGTCACTGGTCCCTGTCACAGTCTCTTCTaGCCATGGCTCCTTAAAGGGCAGGTTGGCCTGTGG +
Preference number: 6 (lower is better)
Translates to: PLVVTGPCHSLF*PWLLKGQVGLW
Trigger: CCACAGGCCAACCTGCCCTTTAAGGAGCCATGGGCAGAAGAGACTGTGACAGGGACCAGTGACAACTAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593424.5
ENST00000634655.1
CDS CCA 72 bp TCTCCTGGTAAAGGTCCTGACCTCAACACCAGGGCCTaGCTGGGGTCACGTCCTGTGACCAAGAAACTCCCT +
Preference number: 6 (lower is better)
Translates to: SPGKGPDLNTRA*LGSRPVTKKLP
Trigger: AGGGAGTTTCTTGGTCACAGGACGTGACCCCAGCCAGGCCCTGGTGTTGAGGTCAGGACCTTTACCAGGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000591812.2
ENST00000598048.1
ENST00000598904.5
ENST00000599911.1
ENST00000634378.1
ENST00000635119.1
ENST00000635328.1
ENST00000635542.2
CDS CCA 72 bp CAGGTAGAGCTGGTTCACAATGGAAAGCACCTTCCCTaGGGTGTCCTGTTGGACCCTGCCGATCTGCACAGG +
Preference number: 6 (lower is better)
Translates to: QVELVHNGKHLP*GVLLDPADLHR
Trigger: CCTGTGCAGATCGGCAGGGTCCAACAGGACACCCCAGGGAAGGTGCTTTCCATTGTGAACCAGCTCTACCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000589111.5
ENST00000591812.2
ENST00000598904.5
ENST00000634669.1
ENST00000635328.1
ENST00000635542.2
CDS CCA 72 bp GACCTGTACCTGCTGGCTGATAGAAAGGCCAGGAGATaGGGCAGGTCTGGCATGCAGAGGTTGGAGGATTCC +
Preference number: 6 (lower is better)
Translates to: DLYLLADRKARR*GRSGMQRLEDS
Trigger: GGAATCCTCCAACCTCTGCATGCCAGACCTGCCCCATCTCCTGGCCTTTCTATCAGCCAGCAGGTACAGGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000589111.5
ENST00000596919.5
ENST00000634669.1
ENST00000634936.1
CDS CCA 72 bp GTGAGAAGGTGTCCTAGGTATCCAAGGGACCAACCCTaGTCCCCTCAAGGCGCCAGGAGACTTACTTCCCAG +
Preference number: 6 (lower is better)
Translates to: VRRCPRYPRDQP*SPQGARRLTSQ
Trigger: CTGGGAAGTAAGTCTCCTGGCGCCTTGAGGGGACCAGGGTTGGTCCCTTGGATACCTAGGACACCTTCTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000589111.5
ENST00000634669.1
CDS CCA 72 bp TTCACAATGGAAAGCACCTTCCCTGGGGTGTCCTGTTaGACCCTGCCGATCTGCACAGGATCTGGAGCCAGC +
Preference number: 6 (lower is better)
Translates to: FTMESTFPGVSC*TLPICTGSGAS
Trigger: GCTGGCTCCAGATCCTGTGCAGATCGGCAGGGTCCAACAGGACACCCCAGGGAAGGTGCTTTCCATTGTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000589111.5
ENST00000634669.1
CDS CAA 72 bp CCCAGTAGTCTGGGCCCCAAAGCCCCATTCATTCCCTaGGAGCAAGGAAATTGGCAGGTTGGCTGTGCCCTC +
Preference number: 6 (lower is better)
Translates to: PSSLGPKAPFIP*EQGNWQVGCAL
Trigger: GAGGGCACAGCCAACCTGCCAATTTCCTTGCTCCAAGGGAATGAATGGGGCTTTGGGGCCCAGACTACTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000589111.5
ENST00000596919.5
ENST00000634669.1
ENST00000634936.1
CDS CAA 72 bp GTTCACAATGGAAAGCACCTTCCCTGGGGTGTCCTGTaGGACCCTGCCGATCTGCACAGGATCTGGAGCCAG +
Preference number: 6 (lower is better)
Translates to: VHNGKHLPWGVL*DPADLHRIWSQ
Trigger: CTGGCTCCAGATCCTGTGCAGATCGGCAGGGTCCAACAGGACACCCCAGGGAAGGTGCTTTCCATTGTGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000589111.5
ENST00000634669.1
CDS TCA 72 bp CCTGCCGATCTGCACAGGATCTGGAGCCAGCAGAAGTaGGAAGGTGTCCTAGGTATCCAAGGGACCAACCCT +
Preference number: 6 (lower is better)
Translates to: PADLHRIWSQQK*EGVLGIQGTNP
Trigger: AGGGTTGGTCCCTTGGATACCTAGGACACCTTCTCACTTCTGCTGGCTCCAGATCCTGTGCAGATCGGCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000589111.5
ENST00000634669.1
CDS GCA 72 bp TGGAAAGCACCTTCCCTGGGGTGTCCTGTTGGACCCTaGCGATCTGCACAGGATCTGTGTGTTCATCTCTGG +
Preference number: 6 (lower is better)
Translates to: WKAPSLGCPVGP*RSAQDLCVHLW
Trigger: CCAGAGATGAACACACAGATCCTGTGCAGATCGGCAGGGTCCAACAGGACACCCCAGGGAAGGTGCTTTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000591812.2
ENST00000598904.5
ENST00000635328.1
ENST00000635542.2
CDS GCA 72 bp CCTGCTTCCAAAGACAGCCCTGATGTAGGAGTCCTTTaGCAGGTGATCCTGGAGGTCAGTAAGGAGGTGCCG +
Preference number: 6 (lower is better)
Translates to: PASKDSPDVGVL*QVILEVSKEVP
Trigger: CGGCACCTCCTTACTGACCTCCAGGATCACCTGGCAAAGGACTCCTACATCAGGGCTGTCTTTGGAAGCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000589111.5
ENST00000591812.2
ENST00000598904.5
ENST00000634669.1
ENST00000635328.1
ENST00000635542.2
CDS CCA 72 bp AGAACATCCCTGCTGGCTGATAGAAAGGCCAGGAGATaGGGCAGGTCTGGCATGCAGAGGTTGGAGGATTCC +
Preference number: 6 (lower is better)
Translates to: RTSLLADRKARR*GRSGMQRLEDS
Trigger: GGAATCCTCCAACCTCTGCATGCCAGACCTGCCCCATCTCCTGGCCTTTCTATCAGCCAGCAGGGATGTTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000591812.2
ENST00000598904.5
ENST00000635328.1
ENST00000635542.2
CDS CCA 72 bp CCAGTAGTCTGGGCCCCAAAGCCCCATTCATTCCCTTaGAGCAAGGAAATTGGCAGGTTGGCTGTGCCCTCT +
Preference number: 6 (lower is better)
Translates to: PVVWAPKPHSFP*SKEIGRLAVPS
Trigger: AGAGGGCACAGCCAACCTGCCAATTTCCTTGCTCCAAGGGAATGAATGGGGCTTTGGGGCCCAGACTACTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000589111.5
ENST00000596919.5
ENST00000634669.1
ENST00000634936.1
CDS CCA 72 bp TCTCCTGGTAAAGGTCCTGACCTCAACACCAGGGCCTaGCTGGGGTCACGTCCTGTGACCAAGAAACTCTGT +
Preference number: 6 (lower is better)
Translates to: SPGKGPDLNTRA*LGSRPVTKKLC
Trigger: ACAGAGTTTCTTGGTCACAGGACGTGACCCCAGCCAGGCCCTGGTGTTGAGGTCAGGACCTTTACCAGGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000596919.5
ENST00000634936.1
CDS CAA 90 bp GTAGAGCTGGTTCACAATGGAAAGCACCTTCCCTGGGGTGTCCTGTaGGACCCTGCCGATCTGCACAGGATCTGTGTGTTCATCTCTGGG +
Preference number: 6 (lower is better)
Translates to: VELVHNGKHLPWGVL*DPADLHRICVFISG
Trigger: CCCAGAGATGAACACACAGATCCTGTGCAGATCGGCAGGGTCCAACAGGACACCCCAGGGAAGGTGCTTTCCATTGTGAACCAGCTCTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000591812.2
ENST00000598904.5
ENST00000635328.1
ENST00000635542.2
CDS CAA 72 bp GTTCACAATGGAAAGCACCTTCCCTGGGGTGTCCTGTaGGACCCTGCCGATCTGCACAGGATCTGTGTGTTC +
Preference number: 6 (lower is better)
Translates to: VHNGKHLPWGVL*DPADLHRICVF
Trigger: GAACACACAGATCCTGTGCAGATCGGCAGGGTCCAACAGGACACCCCAGGGAAGGTGCTTTCCATTGTGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000591812.2
ENST00000598904.5
ENST00000635328.1
ENST00000635542.2
CDS CAA 72 bp ACCGCGCCGGTCCAGCTGATAGTTCTTAGTGATCAATaGACTGTGGGCTGGAACCTCAGGGGAGGTGCCTTA +
Preference number: 6 (lower is better)
Translates to: TAPVQLIVLSDQ*TVGWNLRGGAL
Trigger: TAAGGCACCTCCCCTGAGGTTCCAGCCCACAGTCAATTGATCACTAAGAACTATCAGCTGGACCGGCGCGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599911.1
ENST00000635119.1
CDS GCA 72 bp GGATCTAAGAGCTCCATAAGAAACTCTACGTCCAGCTaGGTGTCCCCAATGTCCGGGCTCCAGATGAGTTCC +
Preference number: 6 (lower is better)
Translates to: GSKSSIRNSTSS*VSPMSGLQMSS
Trigger: GGAACTCATCTGGAGCCCGGACATTGGGGACACGCAGCTGGACGTAGAGTTTCTTATGGAGCTCTTAGATCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000589111.5
ENST00000591812.2
ENST00000593424.5
ENST00000593809.1
ENST00000596961.1
ENST00000598904.5
ENST00000634563.1
ENST00000634567.1
ENST00000634655.1
ENST00000634669.1
ENST00000635328.1
ENST00000635542.2
CDS CCA 72 bp TTCACAATGGAAAGCACCTTCCCTGGGGTGTCCTGTTaGACCCTGCCGATCTGCACAGGATCTGTGTGTTCA +
Preference number: 6 (lower is better)
Translates to: FTMESTFPGVSC*TLPICTGSVCS
Trigger: TGAACACACAGATCCTGTGCAGATCGGCAGGGTCCAACAGGACACCCCAGGGAAGGTGCTTTCCATTGTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000591812.2
ENST00000598904.5
ENST00000635328.1
ENST00000635542.2
CDS CCA 72 bp CCCAAAGCCCCATTCATTCCCTTGGAGCAAGGAAATTaGCAGGTTGGCTGTGCCCTCTTTAGAGAACCGTGC +
Preference number: 6 (lower is better)
Translates to: PKAPFIPLEQGN*QVGCALFREPC
Trigger: GCACGGTTCTCTAAAGAGGGCACAGCCAACCTGCCAATTTCCTTGCTCCAAGGGAATGAATGGGGCTTTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000589111.5
ENST00000596919.5
ENST00000634669.1
ENST00000634936.1
CDS CAA 90 bp CTCCTCAAACCCAGTAGTCTGGGCCCCAAAGCCCCATTCATTCCCTaGGAGCAAGGAAATTGGCAGGTTGGCTGTGCCCTCTTTAGAGAA +
Preference number: 6 (lower is better)
Translates to: LLKPSSLGPKAPFIP*EQGNWQVGCALFRE
Trigger: TTCTCTAAAGAGGGCACAGCCAACCTGCCAATTTCCTTGCTCCAAGGGAATGAATGGGGCTTTGGGGCCCAGACTACTGGGTTTGAGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000589111.5
ENST00000596919.5
ENST00000634669.1
ENST00000634936.1
CDS CCA 72 bp GTCTCCAGTTCTATATTCTCCTCAAACCCAGTAGTCTaGGCCCCAAAGCCCCATTCATTCCCTTGGAGCAAG +
Preference number: 6 (lower is better)
Translates to: VSSSIFSSNPVV*APKPHSFPWSK
Trigger: CTTGCTCCAAGGGAATGAATGGGGCTTTGGGGCCCAGACTACTGGGTTTGAGGAGAATATAGAACTGGAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000589111.5
ENST00000596919.5
ENST00000634669.1
ENST00000634936.1