RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RIN3 (Homo sapiens)

Ensembl gene IDs: ENSG00000100599

Ensembl transcript IDs: ENST00000216487.12, ENST00000418924.6, ENST00000553959.1, ENST00000554888.1, ENST00000555589.5, ENST00000555891.1, ENST00000555908.5, ENST00000556385.5, ENST00000556418.1, ENST00000557762.1, ENST00000620541.4

Found 1017 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CCAGCGTCCGCGCCTGCTGCTCGGGCTCCAGGTACGACACGCAGATaGAGTCCTGCGGAGACGCGAGGGGCCTGTGGTCACGGCGGGGCC +
Preference number: 1 (lower is better)
Translates to: PASAPAARAPGTTRR*SPAETRGACGHGGA
Trigger: GGCCCCGCCGTGACCACAGGCCCCTCGCGTCTCCGCAGGACTTCATCTGCGTGTCGTACCTGGAGCCCGAGCAGCAGGCGCGGACGCTGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556418.1
3UTR GCA 90 bp GGTCCGCGGAGCTGGCCGTGCTTGGCGCCCTGGCGTGTGTCTAGCTaGTTCTTGCCGGGCACAGAGCTGCGGGGTCTGGGGGCACCGGGA +
Preference number: 1 (lower is better)
Translates to: GPRSWPCLAPWRVSS*FLPGTELRGLGAPG
Trigger: TCCCGGTGCCCCCAGACCCCGCAGCTCTGTGCCCGGCAAGAAGCAGCTAGACACACGCCAGGGCGCCAAGCACGGCCAGCTCCGCGGACC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
3UTR GCA 90 bp GCCTGGGCCTGGGTGTCCGCCCGCGACGCCAGCGTCCGCGCCTGCTaGTCGGGCTCCAGGTACGACACGCAGATGAAGTCCTGCGGAGAC +
Preference number: 1 (lower is better)
Translates to: AWAWVSARDASVRAC*SGSRYDTQMKSCGD
Trigger: GTCTCCGCAGGACTTCATCTGCGTGTCGTACCTGGAGCCCGAGCAGCAGGCGCGGACGCTGGCGTCGCGGGCGGACACCCAGGCCCAGGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556418.1
3UTR GCA 90 bp AGCGCCTGGGCCTGGGTGTCCGCCCGCGACGCCAGCGTCCGCGCCTaGTGCTCGGGCTCCAGGTACGACACGCAGATGAAGTCCTGCGGA +
Preference number: 1 (lower is better)
Translates to: SAWAWVSARDASVRA*CSGSRYDTQMKSCG
Trigger: TCCGCAGGACTTCATCTGCGTGTCGTACCTGGAGCCCGAGCAGCAGGCGCGGACGCTGGCGTCGCGGGCGGACACCCAGGCCCAGGCGCT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556418.1
3UTR GCA 90 bp GCCTGGGCCTGGGTGTCCGCCCGCGACGCCAGCGTCCGCGCCTGCTaGTCGGGCTCCAGGTACGACACGCAGATGAAGTCCTGTACGGAG +
Preference number: 1 (lower is better)
Translates to: AWAWVSARDASVRAC*SGSRYDTQMKSCTE
Trigger: CTCCGTACAGGACTTCATCTGCGTGTCGTACCTGGAGCCCGAGCAGCAGGCGCGGACGCTGGCGTCGCGGGCGGACACCCAGGCCCAGGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555589.5
3UTR GCA 90 bp AGCGCCTGGGCCTGGGTGTCCGCCCGCGACGCCAGCGTCCGCGCCTaGTGCTCGGGCTCCAGGTACGACACGCAGATGAAGTCCTGTACG +
Preference number: 1 (lower is better)
Translates to: SAWAWVSARDASVRA*CSGSRYDTQMKSCT
Trigger: CGTACAGGACTTCATCTGCGTGTCGTACCTGGAGCCCGAGCAGCAGGCGCGGACGCTGGCGTCGCGGGCGGACACCCAGGCCCAGGCGCT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555589.5
3UTR GCA 90 bp AGGCCCCTCCCTGGATGGATAGCGGGTGGCGGGCGCCAAGCTGTCTaGGAGTCCGGCACCTGCGCCTTTCCCGTCTCTGCCGCGAGCCTG +
Preference number: 1 (lower is better)
Translates to: RPLPGWIAGGGRQAV*ESGTCAFPVSAASL
Trigger: CAGGCTCGCGGCAGAGACGGGAAAGGCGCAGGTGCCGGACTCGCAGACAGCTTGGCGCCCGCCACCCGCTATCCATCCAGGGAGGGGCCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556418.1
3UTR GCA 90 bp CGCGCCTGCTGCTCGGGCTCCAGGTACGACACGCAGATGAAGTCCTaGGGAGACGCGAGGGGCCTGTGGTCACGGCGGGGCCCTGTCTCC +
Preference number: 1 (lower is better)
Translates to: RACCSGSRYDTQMKS*GDARGLWSRRGPVS
Trigger: GGAGACAGGGCCCCGCCGTGACCACAGGCCCCTCGCGTCTCCGCAGGACTTCATCTGCGTGTCGTACCTGGAGCCCGAGCAGCAGGCGCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556418.1
3UTR CCA 90 bp AGGTACGACACGCAGATGAAGTCCTGCGGAGACGCGAGGGGCCTGTaGTCACGGCGGGGCCCTGTCTCCTCAGGCGCCCTCTCCCGGCCC +
Preference number: 1 (lower is better)
Translates to: RYDTQMKSCGDARGL*SRRGPVSSGALSRP
Trigger: GGGCCGGGAGAGGGCGCCTGAGGAGACAGGGCCCCGCCGTGACCACAGGCCCCTCGCGTCTCCGCAGGACTTCATCTGCGTGTCGTACCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556418.1
3UTR GCA 90 bp CGACGTTGGCCTGGGCACGTCATGGAATGGCCCATGTCCCTCTGCTaGGTGGACGTCGCGGTCGGGAGTGCGCAGCCAGAGGCGGGGCCA +
Preference number: 1 (lower is better)
Translates to: RRWPGHVMEWPMSLC*VDVAVGSAQPEAGP
Trigger: TGGCCCCGCCTCTGGCTGCGCACTCCCGACCGCGACGTCCACGCAGCAGAGGGACATGGGCCATTCCATGACGTGCCCAGGCCAACGTCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
3UTR GCA 90 bp CTGCGACGTTGGCCTGGGCACGTCATGGAATGGCCCATGTCCCTCTaGTGCGTGGACGTCGCGGTCGGGAGTGCGCAGCCAGAGGCGGGG +
Preference number: 1 (lower is better)
Translates to: LRRWPGHVMEWPMSL*CVDVAVGSAQPEAG
Trigger: CCCCGCCTCTGGCTGCGCACTCCCGACCGCGACGTCCACGCAGCAGAGGGACATGGGCCATTCCATGACGTGCCCAGGCCAACGTCGCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
3UTR GCA 90 bp CCTGAGGCGGGGCTGGGCTTGTCCATGGGTCCGCGGAGCTGGCCGTaGTTGGCGCCCTGGCGTGTGTCTAGCTGCTTCTTGCCGGGCACA +
Preference number: 1 (lower is better)
Translates to: PEAGLGLSMGPRSWP*LAPWRVSSCFLPGT
Trigger: TGTGCCCGGCAAGAAGCAGCTAGACACACGCCAGGGCGCCAAGCACGGCCAGCTCCGCGGACCCATGGACAAGCCCAGCCCCGCCTCAGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
3UTR CCA 90 bp GTTGGCCTGGGCACGTCATGGAATGGCCCATGTCCCTCTGCTGCGTaGACGTCGCGGTCGGGAGTGCGCAGCCAGAGGCGGGGCCAGACG +
Preference number: 1 (lower is better)
Translates to: VGLGTSWNGPCPSAA*TSRSGVRSQRRGQT
Trigger: CGTCTGGCCCCGCCTCTGGCTGCGCACTCCCGACCGCGACGTCCACGCAGCAGAGGGACATGGGCCATTCCATGACGTGCCCAGGCCAAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
3UTR CCA 90 bp AGGCGGGGCTGGGCTTGTCCATGGGTCCGCGGAGCTGGCCGTGCTTaGCGCCCTGGCGTGTGTCTAGCTGCTTCTTGCCGGGCACAGAGC +
Preference number: 1 (lower is better)
Translates to: RRGWACPWVRGAGRA*RPGVCLAASCRAQS
Trigger: GCTCTGTGCCCGGCAAGAAGCAGCTAGACACACGCCAGGGCGCCAAGCACGGCCAGCTCCGCGGACCCATGGACAAGCCCAGCCCCGCCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
3UTR CCA 90 bp TCGAGCCCCGGCTGTAAAGTGGGGATAGCGCCCGCCTCCCATAAATaGGCGAGCAGGCGCTGGAAGCTCCGGCCCGGAGCGGCCTCGCCT +
Preference number: 1 (lower is better)
Translates to: SSPGCKVGIAPASHK*ASRRWKLRPGAASP
Trigger: AGGCGAGGCCGCTCCGGGCCGGAGCTTCCAGCGCCTGCTCGCCCATTTATGGGAGGCGGGCGCTATCCCCACTTTACAGCCGGGGCTCGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556418.1
3UTR GCA 90 bp GGAGCTGGCCGTGCTTGGCGCCCTGGCGTGTGTCTAGCTGCTTCTTaGCGGGCACAGAGCTGCGGGGTCTGGGGGCACCGGGAGCTAAGA +
Preference number: 1 (lower is better)
Translates to: GAGRAWRPGVCLAAS*RAQSCGVWGHRELR
Trigger: TCTTAGCTCCCGGTGCCCCCAGACCCCGCAGCTCTGTGCCCGGCAAGAAGCAGCTAGACACACGCCAGGGCGCCAAGCACGGCCAGCTCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
3UTR CCA 90 bp CTGGGCTTGTCCATGGGTCCGCGGAGCTGGCCGTGCTTGGCGCCCTaGCGTGTGTCTAGCTGCTTCTTGCCGGGCACAGAGCTGCGGGGT +
Preference number: 1 (lower is better)
Translates to: LGLSMGPRSWPCLAP*RVSSCFLPGTELRG
Trigger: ACCCCGCAGCTCTGTGCCCGGCAAGAAGCAGCTAGACACACGCCAGGGCGCCAAGCACGGCCAGCTCCGCGGACCCATGGACAAGCCCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
3UTR TCA 90 bp CCCTTGTGGCCGGATTGGGAACAGCAGGCCTGCGCGGGAAGCGGCTaGGGATCCCGGCTCGGCGGAGACCGTGATGGCAACTGGTGGCTA +
Preference number: 1 (lower is better)
Translates to: PLWPDWEQQACAGSG*GSRLGGDRDGNWWL
Trigger: TAGCCACCAGTTGCCATCACGGTCTCCGCCGAGCCGGGATCCTCAGCCGCTTCCCGCGCAGGCCTGCTGTTCCCAATCCGGCCACAAGGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556418.1
3UTR GCA 90 bp TGGCGCCCTGGCGTGTGTCTAGCTGCTTCTTGCCGGGCACAGAGCTaGGGGGTCTGGGGGCACCGGGAGCTAAGAGCAGGCTCTGGTGCA +
Preference number: 1 (lower is better)
Translates to: WRPGVCLAASCRAQS*GVWGHRELRAGSGA
Trigger: TGCACCAGAGCCTGCTCTTAGCTCCCGGTGCCCCCAGACCCCGCAGCTCTGTGCCCGGCAAGAAGCAGCTAGACACACGCCAGGGCGCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
3UTR CCA 90 bp GTTTTCCCTGAGGCGGGGCTGGGCTTGTCCATGGGTCCGCGGAGCTaGCCGTGCTTGGCGCCCTGGCGTGTGTCTAGCTGCTTCTTGCCG +
Preference number: 1 (lower is better)
Translates to: VFPEAGLGLSMGPRS*PCLAPWRVSSCFLP
Trigger: CGGCAAGAAGCAGCTAGACACACGCCAGGGCGCCAAGCACGGCCAGCTCCGCGGACCCATGGACAAGCCCAGCCCCGCCTCAGGGAAAAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
3UTR CCA 90 bp AACCGACACCCTGAGGTGCTCCTGAGATGCTGGGTCCACCCTGAGTaGCACGGGGAGCAGCTGTGGCCGGTGCTCCTTCCTAGGCCAGTC +
Preference number: 1 (lower is better)
Translates to: NRHPEVLLRCWVHPE*HGEQLWPVLLPRPV
Trigger: GACTGGCCTAGGAAGGAGCACCGGCCACAGCTGCTCCCCGTGCCACTCAGGGTGGACCCAGCATCTCAGGAGCACCTCAGGGTGTCGGTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
3UTR CCA 90 bp GGAGGCCTGTCTCTTAACCGACACCCTGAGGTGCTCCTGAGATGCTaGGTCCACCCTGAGTGGCACGGGGAGCAGCTGTGGCCGGTGCTC +
Preference number: 1 (lower is better)
Translates to: GGLSLNRHPEVLLRC*VHPEWHGEQLWPVL
Trigger: GAGCACCGGCCACAGCTGCTCCCCGTGCCACTCAGGGTGGACCCAGCATCTCAGGAGCACCTCAGGGTGTCGGTTAAGAGACAGGCCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
3UTR TCA 90 bp ACAGCTCGATTTCACAGGCACAGTTTGCGTCATGGGCTGTGGGCCTaGGGCTGGAGACTAGGGGGAATCCGGGGGCCCGGTCTCTTGGGG +
Preference number: 1 (lower is better)
Translates to: TARFHRHSLRHGLWA*GWRLGGIRGPGLLG
Trigger: CCCCAAGAGACCGGGCCCCCGGATTCCCCCTAGTCTCCAGCCTCAGGCCCACAGCCCATGACGCAAACTGTGCCTGTGAAATCGAGCTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000555589.5
3UTR CCA 90 bp CCGGACTTTGGTCTTCTAAGGACACCCTCTCGGAAACGCGGCGTCTaGGAGGGGCAGTGGGAAGGTTCTTCTTCGCAGGCAGTGGCGGGG +
Preference number: 1 (lower is better)
Translates to: PDFGLLRTPSRKRGV*EGQWEGSSSQAVAG
Trigger: CCCCGCCACTGCCTGCGAAGAAGAACCTTCCCACTGCCCCTCCCAGACGCCGCGTTTCCGAGAGGGTGTCCTTAGAAGACCAAAGTCCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555589.5
3UTR CCA 90 bp ATTTTCACAACTGTCCTGCGACGTTGGCCTGGGCACGTCATGGAATaGCCCATGTCCCTCTGCTGCGTGGACGTCGCGGTCGGGAGTGCG +
Preference number: 1 (lower is better)
Translates to: IFTTVLRRWPGHVME*PMSLCCVDVAVGSA
Trigger: CGCACTCCCGACCGCGACGTCCACGCAGCAGAGGGACATGGGCCATTCCATGACGTGCCCAGGCCAACGTCGCAGGACAGTTGTGAAAAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
3UTR CCA 90 bp GAGGTGGGCGGCAAAGGGCGTGCAGGGCAATTTCCAAGAGGTGGCTaGTCGGTGGGCAGGGCGCTGCTGCAGTCCTCGATGAAAATAGGA +
Preference number: 1 (lower is better)
Translates to: EVGGKGRAGQFPRGG*SVGRALLQSSMKIG
Trigger: TCCTATTTTCATCGAGGACTGCAGCAGCGCCCTGCCCACCGACCAGCCACCTCTTGGAAATTGCCCTGCACGCCCTTTGCCGCCCACCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555589.5
3UTR CCA 90 bp CCTGGGCCAGGCTTGGACCAAGAGTGTCCATGTCCCTACAGTCTGTaGGAGTCCGGGGTGTTGGGAGGGGATGGGAACAGAGGTGTGCTG +
Preference number: 1 (lower is better)
Translates to: PGPGLDQECPCPYSL*ESGVLGGDGNRGVL
Trigger: CAGCACACCTCTGTTCCCATCCCCTCCCAACACCCCGGACTCCCACAGACTGTAGGGACATGGACACTCTTGGTCCAAGCCTGGCCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556418.1
3UTR TCA 90 bp CCTTGCCCAGGATCATGGAGGGCTTCTTCTTCACGCTGGGGCTGCTaGACTGCTCCAGCTCCTCCTCCGTGCTGCTGGTGGAGTAGGAGT +
Preference number: 1 (lower is better)
Translates to: PCPGSWRASSSRWGC*TAPAPPPCCWWSRS
Trigger: ACTCCTACTCCACCAGCAGCACGGAGGAGGAGCTGGAGCAGTTCAGCAGCCCCAGCGTGAAGAAGAAGCCCTCCATGATCCTGGGCAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555589.5
3UTR GCA 90 bp CGCGTCTCGGAGTCCCTGCAAAGAGGAGCCGGCGCGTCCCCTGGCTaGTGGTCCACAGGCTCCCCATCATTCATTCATTCATTCATTCCC +
Preference number: 1 (lower is better)
Translates to: RVSESLQRGAGASPG*WSTGSPSFIHSFIP
Trigger: GGGAATGAATGAATGAATGAATGATGGGGAGCCTGTGGACCAGCAGCCAGGGGACGCGCCGGCTCCTCTTTGCAGGGACTCCGAGACGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556418.1
3UTR CCA 90 bp ATCAGAGGTGGGCGGCAAAGGGCGTGCAGGGCAATTTCCAAGAGGTaGCTGGTCGGTGGGCAGGGCGCTGCTGCAGTCCTCGATGAAAAT +
Preference number: 1 (lower is better)
Translates to: IRGGRQRACRAISKR*LVGGQGAAAVLDEN
Trigger: ATTTTCATCGAGGACTGCAGCAGCGCCCTGCCCACCGACCAGCCACCTCTTGGAAATTGCCCTGCACGCCCTTTGCCGCCCACCTCTGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555589.5
3UTR GCA 90 bp GCGCCATCATCTCCAGGCTGTACACCTTGTAGTCCTGCACCAGGCTaGCAAAGTACGAGCCCTTGTCCTGCGCCAGCTCCACCACCTTCT +
Preference number: 1 (lower is better)
Translates to: APSSPGCTPCSPAPG*QSTSPCPAPAPPPS
Trigger: AGAAGGTGGTGGAGCTGGCGCAGGACAAGGGCTCGTACTTTGGCAGCCTGGTGCAGGACTACAAGGTGTACAGCCTGGAGATGATGGCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555589.5
3UTR CCA 90 bp GTCTCGGAGTCCCTGCAAAGAGGAGCCGGCGCGTCCCCTGGCTGCTaGTCCACAGGCTCCCCATCATTCATTCATTCATTCATTCCCTCC +
Preference number: 1 (lower is better)
Translates to: VSESLQRGAGASPGC*STGSPSFIHSFIPS
Trigger: GGAGGGAATGAATGAATGAATGAATGATGGGGAGCCTGTGGACCAGCAGCCAGGGGACGCGCCGGCTCCTCTTTGCAGGGACTCCGAGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556418.1
3UTR CCA 90 bp AAGGCGCGTCTCGGAGTCCCTGCAAAGAGGAGCCGGCGCGTCCCCTaGCTGCTGGTCCACAGGCTCCCCATCATTCATTCATTCATTCAT +
Preference number: 1 (lower is better)
Translates to: KARLGVPAKRSRRVP*LLVHRLPIIHSFIH
Trigger: ATGAATGAATGAATGAATGATGGGGAGCCTGTGGACCAGCAGCCAGGGGACGCGCCGGCTCCTCTTTGCAGGGACTCCGAGACGCGCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556418.1
3UTR CCA 90 bp ATGTTATTTTCACAACTGTCCTGCGACGTTGGCCTGGGCACGTCATaGAATGGCCCATGTCCCTCTGCTGCGTGGACGTCGCGGTCGGGA +
Preference number: 1 (lower is better)
Translates to: MLFSQLSCDVGLGTS*NGPCPSAAWTSRSG
Trigger: TCCCGACCGCGACGTCCACGCAGCAGAGGGACATGGGCCATTCCATGACGTGCCCAGGCCAACGTCGCAGGACAGTTGTGAAAATAACAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
3UTR GCA 90 bp AGGAAAGCGTGGAACATGCTGCTGAAACTGGCAAAGCTCAGCCGGTaGCGAGCCTTGCCCAGGATCATGGAGGGCTTCTTCTTCACGCTG +
Preference number: 1 (lower is better)
Translates to: RKAWNMLLKLAKLSR*RALPRIMEGFFFTL
Trigger: CAGCGTGAAGAAGAAGCCCTCCATGATCCTGGGCAAGGCTCGGCACCGGCTGAGCTTTGCCAGTTTCAGCAGCATGTTCCACGCTTTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555589.5
3UTR GCA 90 bp GGCTCAGCATCAGGAACCCCTAAGGTAGAAGCAGGAAGTACGGGATaGCTGGGCCAGGCTTGGACCAAGAGTGTCCATGTCCCTACAGTC +
Preference number: 1 (lower is better)
Translates to: GSASGTPKVEAGSTG*LGQAWTKSVHVPTV
Trigger: GACTGTAGGGACATGGACACTCTTGGTCCAAGCCTGGCCCAGGCATCCCGTACTTCCTGCTTCTACCTTAGGGGTTCCTGATGCTGAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556418.1
3UTR CCA 90 bp GGACGAGCGTCATGTTATTTTCACAACTGTCCTGCGACGTTGGCCTaGGCACGTCATGGAATGGCCCATGTCCCTCTGCTGCGTGGACGT +
Preference number: 1 (lower is better)
Translates to: GRASCYFHNCPATLA*ARHGMAHVPLLRGR
Trigger: ACGTCCACGCAGCAGAGGGACATGGGCCATTCCATGACGTGCCCAGGCCAACGTCGCAGGACAGTTGTGAAAATAACATGACGCTCGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
3UTR CCA 90 bp GCCTTGGACGAGCGTCATGTTATTTTCACAACTGTCCTGCGACGTTaGCCTGGGCACGTCATGGAATGGCCCATGTCCCTCTGCTGCGTG +
Preference number: 1 (lower is better)
Translates to: ALDERHVIFTTVLRR*PGHVMEWPMSLCCV
Trigger: CACGCAGCAGAGGGACATGGGCCATTCCATGACGTGCCCAGGCCAACGTCGCAGGACAGTTGTGAAAATAACATGACGCTCGTCCAAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
3UTR CCA 90 bp ACTTCTGCAGGATCTTCTCCATCATGGGCACCTCCGGCACGCTGGTaGTCACACCTAGGTCAGTGGTGGTGGTGGCCAGGATCACTAACT +
Preference number: 1 (lower is better)
Translates to: TSAGSSPSWAPPARW*SHLGQWWWWPGSLT
Trigger: AGTTAGTGATCCTGGCCACCACCACCACTGACCTAGGTGTGACCACCAGCGTGCCGGAGGTGCCCATGATGGAGAAGATCCTGCAGAAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555589.5
3UTR TCA 90 bp TGTACAGCTTGCGGTTGTTGGAGAGGAAAGCGTGGAACATGCTGCTaGAACTGGCAAAGCTCAGCCGGTGCCGAGCCTTGCCCAGGATCA +
Preference number: 1 (lower is better)
Translates to: CTACGCWRGKRGTCC*NWQSSAGAEPCPGS
Trigger: TGATCCTGGGCAAGGCTCGGCACCGGCTGAGCTTTGCCAGTTTCAGCAGCATGTTCCACGCTTTCCTCTCCAACAACCGCAAGCTGTACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555589.5
3UTR TCA 90 bp CTAGGTCAGTGGTGGTGGTGGCCAGGATCACTAACTGGTTCTCCTTaGGCTGCTGCAGCGAACCATCCTTGCTGTGGATCTGATGCAGGC +
Preference number: 1 (lower is better)
Translates to: LGQWWWWPGSLTGSP*AAAANHPCCGSDAG
Trigger: GCCTGCATCAGATCCACAGCAAGGATGGTTCGCTGCAGCAGCTCAAGGAGAACCAGTTAGTGATCCTGGCCACCACCACCACTGACCTAG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555589.5
3UTR TCA 90 bp CTCCTGCACCCTTCCTGCTTGCCCAGGGAGAACACCAATGCCTGCTaGTATGTTTCTAGACGCACCCAAGTCCTGGACACACACTGGCAG +
Preference number: 1 (lower is better)
Translates to: LLHPSCLPRENTNAC*YVSRRTQVLDTHWQ
Trigger: CTGCCAGTGTGTGTCCAGGACTTGGGTGCGTCTAGAAACATATCAGCAGGCATTGGTGTTCTCCCTGGGCAAGCAGGAAGGGTGCAGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556418.1
3UTR CCA 90 bp TCCACCACCTTCTTGTACAGCTTGCGGTTGTTGGAGAGGAAAGCGTaGAACATGCTGCTGAAACTGGCAAAGCTCAGCCGGTGCCGAGCC +
Preference number: 1 (lower is better)
Translates to: STTFLYSLRLLERKA*NMLLKLAKLSRCRA
Trigger: GGCTCGGCACCGGCTGAGCTTTGCCAGTTTCAGCAGCATGTTCCACGCTTTCCTCTCCAACAACCGCAAGCTGTACAAGAAGGTGGTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555589.5
3UTR CCA 90 bp GTGGTCACACCTAGGTCAGTGGTGGTGGTGGCCAGGATCACTAACTaGTTCTCCTTGAGCTGCTGCAGCGAACCATCCTTGCTGTGGATC +
Preference number: 1 (lower is better)
Translates to: VVTPRSVVVVARITN*FSLSCCSEPSLLWI
Trigger: GATCCACAGCAAGGATGGTTCGCTGCAGCAGCTCAAGGAGAACCAGTTAGTGATCCTGGCCACCACCACCACTGACCTAGGTGTGACCAC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555589.5
3UTR TCA 90 bp GGCGCCCCTGAGGCATGTGAACCATGGGCTGTGCCCTCCCAGAGGTaGCAGCTTCATATGCAGAGGATGATAGGATGTGATATGCACTGT +
Preference number: 1 (lower is better)
Translates to: GAPEACEPWAVPSQR*QLHMQRMIGCDMHC
Trigger: ACAGTGCATATCACATCCTATCATCCTCTGCATATGAAGCTGTCACCTCTGGGAGGGCACAGCCCATGGTTCACATGCCTCAGGGGCGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556418.1
3UTR TCA 90 bp CCTGTCTCCCAGGCCTGGGCTCTGCTTATTATAGATGCACCATCTTaGAAGCCAGGAGTGTGGCTCAGGACTGGTCTGCTCTGGGTGTCA +
Preference number: 1 (lower is better)
Translates to: PVSQAWALLIIDAPS*KPGVWLRTGLLWVS
Trigger: TGACACCCAGAGCAGACCAGTCCTGAGCCACACTCCTGGCTTTCAAGATGGTGCATCTATAATAAGCAGAGCCCAGGCCTGGGAGACAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556418.1
3UTR GCA 90 bp AGGAAGTGGCCTTGGACGAGCGTCATGTTATTTTCACAACTGTCCTaGGACGTTGGCCTGGGCACGTCATGGAATGGCCCATGTCCCTCT +
Preference number: 1 (lower is better)
Translates to: RKWPWTSVMLFSQLS*DVGLGTSWNGPCPS
Trigger: AGAGGGACATGGGCCATTCCATGACGTGCCCAGGCCAACGTCGCAGGACAGTTGTGAAAATAACATGACGCTCGTCCAAGGCCACTTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
3UTR TCA 90 bp TGGTTCTCCTTGAGCTGCTGCAGCGAACCATCCTTGCTGTGGATCTaGTGCAGGCATGAGTTGATGGCTTCCTTCAGGGGCTTCAGGACA +
Preference number: 1 (lower is better)
Translates to: WFSLSCCSEPSLLWI*CRHELMASFRGFRT
Trigger: TGTCCTGAAGCCCCTGAAGGAAGCCATCAACTCATGCCTGCATCAGATCCACAGCAAGGATGGTTCGCTGCAGCAGCTCAAGGAGAACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555589.5
3UTR CCA 90 bp CTCGGTGTCTCAGGGCTATTAGGACTTGCCCTCAGGAAGTGGCCTTaGACGAGCGTCATGTTATTTTCACAACTGTCCTGCGACGTTGGC +
Preference number: 1 (lower is better)
Translates to: LGVSGLLGLALRKWP*TSVMLFSQLSCDVG
Trigger: GCCAACGTCGCAGGACAGTTGTGAAAATAACATGACGCTCGTCCAAGGCCACTTCCTGAGGGCAAGTCCTAATAGCCCTGAGACACCGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
3UTR CCA 90 bp TGCCGTCTCGGTGTCTCAGGGCTATTAGGACTTGCCCTCAGGAAGTaGCCTTGGACGAGCGTCATGTTATTTTCACAACTGTCCTGCGAC +
Preference number: 1 (lower is better)
Translates to: CRLGVSGLLGLALRK*PWTSVMLFSQLSCD
Trigger: GTCGCAGGACAGTTGTGAAAATAACATGACGCTCGTCCAAGGCCACTTCCTGAGGGCAAGTCCTAATAGCCCTGAGACACCGAGACGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
3UTR TCA 90 bp GCTGCAGCGAACCATCCTTGCTGTGGATCTGATGCAGGCATGAGTTaGTGGCTTCCTTCAGGGGCTTCAGGACACATTTGTACAAGGCAG +
Preference number: 1 (lower is better)
Translates to: AAANHPCCGSDAGMS*WLPSGASGHICTRQ
Trigger: CTGCCTTGTACAAATGTGTCCTGAAGCCCCTGAAGGAAGCCATCAACTCATGCCTGCATCAGATCCACAGCAAGGATGGTTCGCTGCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555589.5
3UTR TCA 90 bp GAGCTGCTGCAGCGAACCATCCTTGCTGTGGATCTGATGCAGGCATaGGTTGATGGCTTCCTTCAGGGGCTTCAGGACACATTTGTACAA +
Preference number: 1 (lower is better)
Translates to: ELLQRTILAVDLMQA*VDGFLQGLQDTFVQ
Trigger: TTGTACAAATGTGTCCTGAAGCCCCTGAAGGAAGCCATCAACTCATGCCTGCATCAGATCCACAGCAAGGATGGTTCGCTGCAGCAGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555589.5
3UTR CCA 90 bp TATTATAGATGCACCATCTTGAAAGCCAGGAGTGTGGCTCAGGACTaGTCTGCTCTGGGTGTCAGAGGAGTGAGTCTGCATAGCTGCTCA +
Preference number: 1 (lower is better)
Translates to: YYRCTILKARSVAQD*SALGVRGVSLHSCS
Trigger: TGAGCAGCTATGCAGACTCACTCCTCTGACACCCAGAGCAGACCAGTCCTGAGCCACACTCCTGGCTTTCAAGATGGTGCATCTATAATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556418.1
3UTR TCA 90 bp GATGAGTTTGCAGGTCTTGAGCAGGATGGAGATCTTCTTCTCAGGTaGGTAGGCCTTGTGCATGCTGGTGAACTTCTGCAGGATCTTCTC +
Preference number: 1 (lower is better)
Translates to: DEFAGLEQDGDLLLR*VGLVHAGELLQDLL
Trigger: GAGAAGATCCTGCAGAAGTTCACCAGCATGCACAAGGCCTACTCACCTGAGAAGAAGATCTCCATCCTGCTCAAGACCTGCAAACTCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555589.5
3UTR GCA 90 bp CTAATGAAGAACATGCCGTCTCGGTGTCTCAGGGCTATTAGGACTTaGCCTCAGGAAGTGGCCTTGGACGAGCGTCATGTTATTTTCACA +
Preference number: 1 (lower is better)
Translates to: LMKNMPSRCLRAIRT*PQEVALDERHVIFT
Trigger: TGTGAAAATAACATGACGCTCGTCCAAGGCCACTTCCTGAGGGCAAGTCCTAATAGCCCTGAGACACCGAGACGGCATGTTCTTCATTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
3UTR-3UTR CCA 90 bp GCGAGGCGACGCCTGCGGGCTGGGGCTGGGCACTCGCAGCACGAGCAGGGCGCCCCCTTGTGGCCGGATTaGGAACAGCAGGCCTGCGCG +
Preference number: 2 (lower is better)
Translates to: ARRRLRAGAGHSQHEQGAPLWPD*EQQACA
Trigger: CGCGCAGGCCTGCTGTTCCCAATCCGGCCACAAGGG...GGCGCCCTGCTCGTGCTGCGAGTGCCCAGCCCCAGCCCGCAGGCGTCGCCTCGC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000556418.1
3UTR-3UTR CCA 90 bp CTGCGGAGACGCGAGGGGCCTGTGGTCACGGCGGGGCCCTGTCTCCTCAGGCGCCTGGGCGCAGTCGGGTaGGGAAGGCCCGGCATGAGC +
Preference number: 2 (lower is better)
Translates to: LRRREGPVVTAGPCLLRRLGAVG*GRPGMS
Trigger: GCTCATGCCGGGCCTTCCCCACCCGACTGCGCCCAG...GCGCCTGAGGAGACAGGGCCCCGCCGTGACCACAGGCCCCTCGCGTCTCCGCAG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556418.1
3UTR-3UTR CCA 90 bp GCGAGGCGACGCCTGCGGGCTGGGGCTGGGCACTCGCAGCACGAGCAGGGCGCCGGGAGTCCGGGGTGTTaGGAGGGGATGGGAACAGAG +
Preference number: 2 (lower is better)
Translates to: ARRRLRAGAGHSQHEQGAGSPGC*EGMGTE
Trigger: CTCTGTTCCCATCCCCTCCCAACACCCCGGACTCCC...GGCGCCCTGCTCGTGCTGCGAGTGCCCAGCCCCAGCCCGCAGGCGTCGCCTCGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000556418.1
3UTR CAA 90 bp TGCAGGCAGAGAGGCTGCGCGCGGGGCTGCCCCCTTGTGGCCGGATaGGGAACAGCAGGCCTGCGCGGGAAGCGGCTGAGGATCCCGGCT +
Preference number: 2 (lower is better)
Translates to: CRQRGCARGCPLVAG*GTAGLRGKRLRIPA
Trigger: AGCCGGGATCCTCAGCCGCTTCCCGCGCAGGCCTGCTGTTCCCAATCCGGCCACAAGGGGGCAGCCCCGCGCGCAGCCTCTCTGCCTGCA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000556418.1
3UTR-3UTR GCA 90 bp TGGATAGCGGGTGGCGGGCGCCAAGCTGTCTGCGAGTCCGGCACCTGCGCCTTTGGCTGCGCGCGGGGCTaGCCCCTTGTGGCCGGATTG +
Preference number: 2 (lower is better)
Translates to: WIAGGGRQAVCESGTCAFGCARG*PLVAGL
Trigger: CAATCCGGCCACAAGGGGGCAGCCCCGCGCGCAGCC...AAAGGCGCAGGTGCCGGACTCGCAGACAGCTTGGCGCCCGCCACCCGCTATCCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556418.1
3UTR-3UTR CCA 90 bp GCGAGGCGACGCCTGCGGGCTGGGGCTGGGCACTCGCAGCACGAGCAGGGCGCCGGTGTTGGGAGGGGATaGGAACAGAGGTGTGCTGGA +
Preference number: 2 (lower is better)
Translates to: ARRRLRAGAGHSQHEQGAGVGRG*EQRCAG
Trigger: TCCAGCACACCTCTGTTCCCATCCCCTCCCAACACC...GGCGCCCTGCTCGTGCTGCGAGTGCCCAGCCCCAGCCCGCAGGCGTCGCCTCGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556418.1
3UTR-3UTR CCA 90 bp GATAGCGGGTGGCGGGCGCCAAGCTGTCTGCGAGTCCGGCACCTGCGCCTTTCCAGCCGGCGCGTCCCCTaGCTGCTGGTCCACAGGCTC +
Preference number: 2 (lower is better)
Translates to: DSGWRAPSCLRVRHLRLSSRRVP*LLVHRL
Trigger: GAGCCTGTGGACCAGCAGCCAGGGGACGCGCCGGCT...GGAAAGGCGCAGGTGCCGGACTCGCAGACAGCTTGGCGCCCGCCACCCGCTATC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556418.1
3UTR CAA 90 bp CGGAGCTGGCCGTGCTTGGCGCCCTGGCGTGTGTCTAGCTGCTTCTaGCCGGGCACAGAGCTGCGGGGTCTGGGGGCACCGGGAGCTAAG +
Preference number: 2 (lower is better)
Translates to: RSWPCLAPWRVSSCF*PGTELRGLGAPGAK
Trigger: CTTAGCTCCCGGTGCCCCCAGACCCCGCAGCTCTGTGCCCGGCAAGAAGCAGCTAGACACACGCCAGGGCGCCAAGCACGGCCAGCTCCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
3UTR CAA 90 bp GAGGCGGGGCTGGGCTTGTCCATGGGTCCGCGGAGCTGGCCGTGCTaGGCGCCCTGGCGTGTGTCTAGCTGCTTCTTGCCGGGCACAGAG +
Preference number: 2 (lower is better)
Translates to: EAGLGLSMGPRSWPC*APWRVSSCFLPGTE
Trigger: CTCTGTGCCCGGCAAGAAGCAGCTAGACACACGCCAGGGCGCCAAGCACGGCCAGCTCCGCGGACCCATGGACAAGCCCAGCCCCGCCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
3UTR-3UTR GCA 90 bp GTCCTGTACGGAGGAGCGGGAGGCCCGGGCCTTGTTGAGAGTACGCCGGCGCTCGAACCCTCCCCCAGCTaGAGGGCGGGGTCCATGAGC +
Preference number: 2 (lower is better)
Translates to: VLYGGAGGPGLVESTPALEPSPS*RAGSMS
Trigger: GCTCATGGACCCCGCCCTGCAGCTGGGGGAGGGTTC...GAGCGCCGGCGTACTCTCAACAAGGCCCGGGCCTCCCGCTCCTCCGTACAGGAC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000555589.5
3UTR-3UTR GCA 90 bp CCCGGGCATCCCATAGTGCGGGCGGGCAACACAGTCCAGCCCCTTAGGGCTGCAGCCAGCGTCCGCGCCTaGTGCTCGGGCTCCAGGTAC +
Preference number: 2 (lower is better)
Translates to: PGHPIVRAGNTVQPLRAAASVRA*CSGSRY
Trigger: GTACCTGGAGCCCGAGCAGCAGGCGCGGACGCTGGC...TGCAGCCCTAAGGGGCTGGACTGTGTTGCCCGCCCGCACTATGGGATGCCCGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556418.1
3UTR-3UTR GCA 90 bp CTGCGGAGACGCGAGGGGCCTGTGGTCACGGCGGGGCCCTGTCTCCTCAGGCGCACACCTGCCGGGCTTTaGCTTTGCTCCCACTGCCTG +
Preference number: 2 (lower is better)
Translates to: LRRREGPVVTAGPCLLRRTPAGL*LCSHCL
Trigger: CAGGCAGTGGGAGCAAAGGCAAAGCCCGGCAGGTGT...GCGCCTGAGGAGACAGGGCCCCGCCGTGACCACAGGCCCCTCGCGTCTCCGCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556418.1
3UTR-3UTR CCA 90 bp GTCCTGTACGGAGGAGCGGGAGGCCCGGGCCTTGTTGAGAGTACGCCGGCGCTCGGAGGCAGGCTGAGCTaGTCCCCCTCTGCCGCCATC +
Preference number: 2 (lower is better)
Translates to: VLYGGAGGPGLVESTPALGGRLS*SPSAAI
Trigger: GATGGCGGCAGAGGGGGACCAGCTCAGCCTGCCTCC...GAGCGCCGGCGTACTCTCAACAAGGCCCGGGCCTCCCGCTCCTCCGTACAGGAC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555589.5
3UTR-3UTR CCA 90 bp GTCCTGTACGGAGGAGCGGGAGGCCCGGGCCTTGTTGAGAGTACGCCGGCGCTCGGCTTTGGCCCTCTCTaGGTGGACCCGGCGTGGGTG +
Preference number: 2 (lower is better)
Translates to: VLYGGAGGPGLVESTPALGFGPL*VDPAWV
Trigger: CACCCACGCCGGGTCCACCCAGAGAGGGCCAAAGCC...GAGCGCCGGCGTACTCTCAACAAGGCCCGGGCCTCCCGCTCCTCCGTACAGGAC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555589.5
3UTR-3UTR GCA 90 bp GGAGCTGGCCGTGCTTGGCGCCCTGGCGTGTGTCTAGCTGCTTCTTGCCGGGCACCCATGTCCCTCTGCTaGGTGGACGTCGCGGTCGGG +
Preference number: 2 (lower is better)
Translates to: GAGRAWRPGVCLAASCRAPMSLC*VDVAVG
Trigger: CCCGACCGCGACGTCCACGCAGCAGAGGGACATGGG...TGCCCGGCAAGAAGCAGCTAGACACACGCCAGGGCGCCAAGCACGGCCAGCTCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
3UTR-3UTR GCA 90 bp GCACAGAGCTGCGGGGTCTGGGGGCACCGGGAGCTAAGAGCAGGCTCTGGTGCACGCCGGTTTGTTGGCTaGAGCGGCCTGGAGCGCCTC +
Preference number: 2 (lower is better)
Translates to: AQSCGVWGHRELRAGSGARRFVG*SGLERL
Trigger: GAGGCGCTCCAGGCCGCTGCAGCCAACAAACCGGCG...TGCACCAGAGCCTGCTCTTAGCTCCCGGTGCCCCCAGACCCCGCAGCTCTGTGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
3UTR-3UTR GCA 90 bp CCAGCCCCACACCTGCCGGGCTTTGCCTTTGCTCCCACTGCCTGTGTGGCCTTGTGCAGGCAGAGAGGCTaGGCGCGGGGCTGCCCCCTT +
Preference number: 2 (lower is better)
Translates to: PAPHLPGFAFAPTACVALCRQRG*ARGCPL
Trigger: AAGGGGGCAGCCCCGCGCGCAGCCTCTCTGCCTGCA...CAAGGCCACACAGGCAGTGGGAGCAAAGGCAAAGCCCGGCAGGTGTGGGGCTGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000556418.1
3UTR-3UTR CCA 90 bp AGTGGCACGGGGAGCAGCTGTGGCCGGTGCTCCTTCCTAGGCCAGTCCTGGGGAAGGGCGCCGGTTTGTTaGCTGCAGCGGCCTGGAGCG +
Preference number: 2 (lower is better)
Translates to: SGTGSSCGRCSFLGQSWGRAPVC*LQRPGA
Trigger: CGCTCCAGGCCGCTGCAGCCAACAAACCGGCGCCCT...TCCCCAGGACTGGCCTAGGAAGGAGCACCGGCCACAGCTGCTCCCCGTGCCACT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
3UTR-3UTR CCA 90 bp GATAGCGGGTGGCGGGCGCCAAGCTGTCTGCGAGTCCGGCACCTGCGCCTTTCCGCGTCCCCTGGCTGCTaGTCCACAGGCTCCCCATCA +
Preference number: 2 (lower is better)
Translates to: DSGWRAPSCLRVRHLRLSASPGC*STGSPS
Trigger: TGATGGGGAGCCTGTGGACCAGCAGCCAGGGGACGC...GGAAAGGCGCAGGTGCCGGACTCGCAGACAGCTTGGCGCCCGCCACCCGCTATC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556418.1
3UTR CAA 90 bp TGTCCTGTAGGGAAAGGCCCTGTTTTCCCTGAGGCGGGGCTGGGCTaGTCCATGGGTCCGCGGAGCTGGCCGTGCTTGGCGCCCTGGCGT +
Preference number: 2 (lower is better)
Translates to: CPVGKGPVFPEAGLG*SMGPRSWPCLAPWR
Trigger: ACGCCAGGGCGCCAAGCACGGCCAGCTCCGCGGACCCATGGACAAGCCCAGCCCCGCCTCAGGGAAAACAGGGCCTTTCCCTACAGGACA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
3UTR-3UTR TCA 90 bp GTCCGCGGAGCTGGCCGTGCTTGGCGCCCTGGCGTGTGTCTAGCTGCTTCTTGCATGCTGGGTCCACCCTaGGTGGCACGGGGAGCAGCT +
Preference number: 2 (lower is better)
Translates to: VRGAGRAWRPGVCLAASCMLGPP*VARGAA
Trigger: AGCTGCTCCCCGTGCCACTCAGGGTGGACCCAGCAT...GCAAGAAGCAGCTAGACACACGCCAGGGCGCCAAGCACGGCCAGCTCCGCGGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
3UTR-3UTR GCA 90 bp TCCCTCCAGGTGAGTTCCCTGCACCCCAGGCGCAATGCTGGGCACGGAGGGCAGCCCCAAGGCATGGTGTaGGGAGGAGGCACTGGGAGG +
Preference number: 2 (lower is better)
Translates to: SLQVSSLHPRRNAGHGGQPQGMV*GGGTGR
Trigger: CCTCCCAGTGCCTCCTCCGCACACCATGCCTTGGGG...CTGCCCTCCGTGCCCAGCATTGCGCCTGGGGTGCAGGGAACTCACCTGGAGGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556418.1
3UTR-3UTR CCA 90 bp ATGGGTCCGCGGAGCTGGCCGTGCTTGGCGCCCTGGCGTGTGTCTAGCTGCTTCTGTCCCTCTGCTGCGTaGACGTCGCGGTCGGGAGTG +
Preference number: 2 (lower is better)
Translates to: MGPRSWPCLAPWRVSSCFCPSAA*TSRSGV
Trigger: CACTCCCGACCGCGACGTCCACGCAGCAGAGGGACA...GAAGCAGCTAGACACACGCCAGGGCGCCAAGCACGGCCAGCTCCGCGGACCCAT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
3UTR-3UTR CCA 90 bp CTGTGTCCTGGCCTTGCTCCGTGCTCTCCCGGGGCGTGTCCTCAGGGCCGTCTGTTTCCAAGAGGTGGCTaGTCGGTGGGCAGGGCGCTG +
Preference number: 2 (lower is better)
Translates to: LCPGLAPCSPGACPQGRLFPRGG*SVGRAL
Trigger: CAGCGCCCTGCCCACCGACCAGCCACCTCTTGGAAA...CAGACGGCCCTGAGGACACGCCCCGGGAGAGCACGGAGCAAGGCCAGGACACAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555589.5
3UTR-3UTR CCA 90 bp CAGGGCCCCGTAGGTGGTGGTCAGATAGTAGGAACCCTCCCCCAGCTGCAGGGCGGCGGCTGGTTCGGATaGTCTGGGGGACCTGGGGCA +
Preference number: 2 (lower is better)
Translates to: QGPVGGGQIVGTLPQLQGGGWFG*SGGPGA
Trigger: TGCCCCAGGTCCCCCAGACCATCCGAACCAGCCGCC...GCCCTGCAGCTGGGGGAGGGTTCCTACTATCTGACCACCACCTACGGGGCCCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000555589.5
3UTR-3UTR CCA 90 bp CTGCGGAGACGCGAGGGGCCTGTGGTCACGGCGGGGCCCTGTCTCCTCAGGCGCAAGCTAGTACAGGGCTaGGGCCAGAACTCAAGCCTC +
Preference number: 2 (lower is better)
Translates to: LRRREGPVVTAGPCLLRRKLVQG*GQNSSL
Trigger: GAGGCTTGAGTTCTGGCCCCAGCCCTGTACTAGCTT...GCGCCTGAGGAGACAGGGCCCCGCCGTGACCACAGGCCCCTCGCGTCTCCGCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556418.1
3UTR CAA 90 bp ACGCAGATGAAGTCCTGTACGGAGGAGCGGGAGGCCCGGGCCTTGTaGAGAGTACGCCGGCGCTCCCAGCGGTGGATGGAGTCCTGCACC +
Preference number: 2 (lower is better)
Translates to: TQMKSCTEEREARAL*RVRRRSQRWMESCT
Trigger: GGTGCAGGACTCCATCCACCGCTGGGAGCGCCGGCGTACTCTCAACAAGGCCCGGGCCTCCCGCTCCTCCGTACAGGACTTCATCTGCGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555589.5
3UTR-3UTR TCA 90 bp TGCTGCTCGGGCTCCAGGTACGACACGCAGATGAAGTCCTGTACGGAGGAGCGGCTTGGGGAGGCAGGCTaGGCTGGTCCCCCTCTGCCG +
Preference number: 2 (lower is better)
Translates to: CCSGSRYDTQMKSCTEERLGEAG*AGPPLP
Trigger: CGGCAGAGGGGGACCAGCTCAGCCTGCCTCCCCAAG...CCGCTCCTCCGTACAGGACTTCATCTGCGTGTCGTACCTGGAGCCCGAGCAGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000555589.5
3UTR-3UTR TCA 90 bp CCTCCCTGGATGGATAGCGGGTGGCGGGCGCCAAGCTGTCTGCGAGTCCGGCACTGTGGGCAGGAAAACTaGGTCCCAGAGTGGGGCAGG +
Preference number: 2 (lower is better)
Translates to: PPWMDSGWRAPSCLRVRHCGQEN*VPEWGR
Trigger: CCTGCCCCACTCTGGGACTCAGTTTTCCTGCCCACA...GTGCCGGACTCGCAGACAGCTTGGCGCCCGCCACCCGCTATCCATCCAGGGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556418.1
3UTR-3UTR GCA 90 bp TGTGAAGAGGGCGCCGGTTTGTTGGCTGCAGCGGCCTGGAGCGCCTCTCTCCTGTGGCCCATGTCCCTCTaGTGCGTGGACGTCGCGGTC +
Preference number: 2 (lower is better)
Translates to: CEEGAGLLAAAAWSASLLWPMSL*CVDVAV
Trigger: GACCGCGACGTCCACGCAGCAGAGGGACATGGGCCA...CAGGAGAGAGGCGCTCCAGGCCGCTGCAGCCAACAAACCGGCGCCCTCTTCACA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
3UTR-3UTR GCA 90 bp ATTCTCCCCACACGATGGCTCCTGCAATCTGCCACAGCTCTGGGGCGTGTCCTGCCGCGGAGCTGGCCGTaGTTGGCGCCCTGGCGTGTG +
Preference number: 2 (lower is better)
Translates to: ILPTRWLLQSATALGRVLPRSWP*LAPWRV
Trigger: CACACGCCAGGGCGCCAAGCACGGCCAGCTCCGCGG...CAGGACACGCCCCAGAGCTGTGGCAGATTGCAGGAGCCATCGTGTGGGGAGAAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
3UTR-3UTR GCA 90 bp GATAGCGGGTGGCGGGCGCCAAGCTGTCTGCGAGTCCGGCACCTGCGCCTTTCCTTACACACCCAGTCCTaGTCTGTCCCAGGCCCTGGG +
Preference number: 2 (lower is better)
Translates to: DSGWRAPSCLRVRHLRLSLHTQS*SVPGPG
Trigger: CCCAGGGCCTGGGACAGAGCAGGACTGGGTGTGTAA...GGAAAGGCGCAGGTGCCGGACTCGCAGACAGCTTGGCGCCCGCCACCCGCTATC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556418.1
3UTR-3UTR CCA 90 bp GGTCCGCGGAGCTGGCCGTGCTTGGCGCCCTGGCGTGTGTCTAGCTGCTTCTTGCCTGCGACGTTGGCCTaGGCACGTCATGGAATGGCC +
Preference number: 2 (lower is better)
Translates to: GPRSWPCLAPWRVSSCFLPATLA*ARHGMA
Trigger: GGCCATTCCATGACGTGCCCAGGCCAACGTCGCAGG...CAAGAAGCAGCTAGACACACGCCAGGGCGCCAAGCACGGCCAGCTCCGCGGACC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
3UTR-3UTR CCA 90 bp CCGGGCACAGAGCTGCGGGGTCTGGGGGCACCGGGAGCTAAGAGCAGGCTCTGGCTTGCCCTCAGGAAGTaGCCTTGGACGAGCGTCATG +
Preference number: 2 (lower is better)
Translates to: PGTELRGLGAPGAKSRLWLALRK*PWTSVM
Trigger: CATGACGCTCGTCCAAGGCCACTTCCTGAGGGCAAG...CCAGAGCCTGCTCTTAGCTCCCGGTGCCCCCAGACCCCGCAGCTCTGTGCCCGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
3UTR-3UTR CCA 90 bp CAGGGCCCCGTAGGTGGTGGTCAGATAGTAGGAACCCTCCCCCAGCTGCAGGGCTGGGTGGACCCGGCGTaGGTGTCTCCAAGGCCATCG +
Preference number: 2 (lower is better)
Translates to: QGPVGGGQIVGTLPQLQGWVDPA*VSPRPS
Trigger: CGATGGCCTTGGAGACACCCACGCCGGGTCCACCCA...GCCCTGCAGCTGGGGGAGGGTTCCTACTATCTGACCACCACCTACGGGGCCCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000555589.5
3UTR-3UTR CCA 90 bp CCCGGGCATCCCATAGTGCGGGCGGGCAACACAGTCCAGCCCCTTAGGGCTGCAGGGCCACTGGGTTGGTaGGGGTTACGCAGACCCTTG +
Preference number: 2 (lower is better)
Translates to: PGHPIVRAGNTVQPLRAAGPLGW*GLRRPL
Trigger: CAAGGGTCTGCGTAACCCCCACCAACCCAGTGGCCC...TGCAGCCCTAAGGGGCTGGACTGTGTTGCCCGCCCGCACTATGGGATGCCCGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556418.1
3UTR-3UTR CCA 90 bp CCCGGGCATCCCATAGTGCGGGCGGGCAACACAGTCCAGCCCCTTAGGGCTGCACCCGCCTCCCATAAATaGGCGAGCAGGCGCTGGAAG +
Preference number: 2 (lower is better)
Translates to: PGHPIVRAGNTVQPLRAAPASHK*ASRRWK
Trigger: CTTCCAGCGCCTGCTCGCCCATTTATGGGAGGCGGG...TGCAGCCCTAAGGGGCTGGACTGTGTTGCCCGCCCGCACTATGGGATGCCCGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556418.1
3UTR-3UTR GCA 90 bp ATGGGTCCGCGGAGCTGGCCGTGCTTGGCGCCCTGGCGTGTGTCTAGCTGCTTCAAGAGCAGGCTCTGGTaGAGGGGTGGAGGCCTGTCT +
Preference number: 2 (lower is better)
Translates to: MGPRSWPCLAPWRVSSCFKSRLW*RGGGLS
Trigger: AGACAGGCCTCCACCCCTGCACCAGAGCCTGCTCTT...GAAGCAGCTAGACACACGCCAGGGCGCCAAGCACGGCCAGCTCCGCGGACCCAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
3UTR-3UTR CCA 90 bp GGTCCGCGGAGCTGGCCGTGCTTGGCGCCCTGGCGTGTGTCTAGCTGCTTCTTGGGGCACGTCATGGAATaGCCCATGTCCCTCTGCTGC +
Preference number: 2 (lower is better)
Translates to: GPRSWPCLAPWRVSSCFLGHVME*PMSLCC
Trigger: GCAGCAGAGGGACATGGGCCATTCCATGACGTGCCC...CAAGAAGCAGCTAGACACACGCCAGGGCGCCAAGCACGGCCAGCTCCGCGGACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
3UTR-3UTR CCA 90 bp TGGGTCCGCGGAGCTGGCCGTGCTTGGCGCCCTGGCGTGTGTCTAGCTGCTTCTTGCAAAGACCGAGGATaGGGTGGGTGTGGGGGACTC +
Preference number: 2 (lower is better)
Translates to: WVRGAGRAWRPGVCLAASCKDRG*GGCGGL
Trigger: GAGTCCCCCACACCCACCCCATCCTCGGTCTTTGCA...AGAAGCAGCTAGACACACGCCAGGGCGCCAAGCACGGCCAGCTCCGCGGACCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
3UTR-3UTR CCA 90 bp GGTCCGCGGAGCTGGCCGTGCTTGGCGCCCTGGCGTGTGTCTAGCTGCTTCTTGTGCAAAGACCGAGGATaGGGTGGGTGTGGGGGACTC +
Preference number: 2 (lower is better)
Translates to: GPRSWPCLAPWRVSSCFLCKDRG*GGCGGL
Trigger: GAGTCCCCCACACCCACCCCATCCTCGGTCTTTGCA...CAAGAAGCAGCTAGACACACGCCAGGGCGCCAAGCACGGCCAGCTCCGCGGACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
3UTR-3UTR CCA 90 bp GCTGAACTGCTCCAGCTCCTCCTCCGTGCTGCTGGTGGAGTAGGAGTCCTGGTCGAGGTGGCTGGTCGGTaGGCAGGGCGCTGCTGCAGT +
Preference number: 2 (lower is better)
Translates to: AELLQLLLRAAGGVGVLVEVAGR*AGRCCS
Trigger: ACTGCAGCAGCGCCCTGCCCACCGACCAGCCACCTC...GACCAGGACTCCTACTCCACCAGCAGCACGGAGGAGGAGCTGGAGCAGTTCAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555589.5
3UTR-3UTR CCA 90 bp GCTGAACTGCTCCAGCTCCTCCTCCGTGCTGCTGGTGGAGTAGGAGTCCTGGTCCTTCTTCGCAGGCAGTaGCGGGGCGGGGACCTGCTG +
Preference number: 2 (lower is better)
Translates to: AELLQLLLRAAGGVGVLVLLRRQ*RGGDLL
Trigger: CAGCAGGTCCCCGCCCCGCCACTGCCTGCGAAGAAG...GACCAGGACTCCTACTCCACCAGCAGCACGGAGGAGGAGCTGGAGCAGTTCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555589.5
3UTR-3UTR CCA 90 bp GTCCTGTACGGAGGAGCGGGAGGCCCGGGCCTTGTTGAGAGTACGCCGGCGCTCCCAGGGCCCCGTAGGTaGTGGTCAGATAGTAGGAAC +
Preference number: 2 (lower is better)
Translates to: VLYGGAGGPGLVESTPALPGPRR*WSDSRN
Trigger: GTTCCTACTATCTGACCACCACCTACGGGGCCCTGG...GAGCGCCGGCGTACTCTCAACAAGGCCCGGGCCTCCCGCTCCTCCGTACAGGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555589.5
3UTR-3UTR CCA 90 bp CCAGCCCCACACCTGCCGGGCTTTGCCTTTGCTCCCACTGCCTGTGTGGCCTTGGCCCTTCCTCTGGTGTaGGGAGTCTCACTGCTCCCC +
Preference number: 2 (lower is better)
Translates to: PAPHLPGFAFAPTACVALALPLV*GVSLLP
Trigger: GGGGAGCAGTGAGACTCCCCACACCAGAGGAAGGGC...CAAGGCCACACAGGCAGTGGGAGCAAAGGCAAAGCCCGGCAGGTGTGGGGCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556418.1
3UTR-3UTR CCA 90 bp GCGAGGCGACGCCTGCGGGCTGGGGCTGGGCACTCGCAGCACGAGCAGGGCGCCGGAGGACTCACACCATaGAAATGGACAGAAGCTAAA +
Preference number: 2 (lower is better)
Translates to: ARRRLRAGAGHSQHEQGAGGLTP*KWTEAK
Trigger: TTTAGCTTCTGTCCATTTCCATGGTGTGAGTCCTCC...GGCGCCCTGCTCGTGCTGCGAGTGCCCAGCCCCAGCCCGCAGGCGTCGCCTCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556418.1
3UTR-3UTR TCA 90 bp TCCCTCCAGGTGAGTTCCCTGCACCCCAGGCGCAATGCTGGGCACGGAGGGCAGGTGCCCTCCCAGAGGTaGCAGCTTCATATGCAGAGG +
Preference number: 2 (lower is better)
Translates to: SLQVSSLHPRRNAGHGGQVPSQR*QLHMQR
Trigger: CCTCTGCATATGAAGCTGTCACCTCTGGGAGGGCAC...CTGCCCTCCGTGCCCAGCATTGCGCCTGGGGTGCAGGGAACTCACCTGGAGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556418.1
3UTR-3UTR GCA 90 bp TGGGAGGGGATGGGAACAGAGGTGTGCTGGAGCTGGCTCACACCCGCCAGGGAGCTCCTGCACCCTTCCTaGTTGCCCAGGGAGAACACC +
Preference number: 2 (lower is better)
Translates to: WEGMGTEVCWSWLTPARELLHPS*LPRENT
Trigger: GGTGTTCTCCCTGGGCAAGCAGGAAGGGTGCAGGAG...CTCCCTGGCGGGTGTGAGCCAGCTCCAGCACACCTCTGTTCCCATCCCCTCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556418.1
3UTR-3UTR GCA 90 bp CTGCGGAGACGCGAGGGGCCTGTGGTCACGGCGGGGCCCTGTCTCCTCAGGCGCGTTTCATCCATACTCTaGCTGGCTCAGCATCAGGAA +
Preference number: 2 (lower is better)
Translates to: LRRREGPVVTAGPCLLRRVSSIL*LAQHQE
Trigger: TTCCTGATGCTGAGCCAGGCAGAGTATGGATGAAAC...GCGCCTGAGGAGACAGGGCCCCGCCGTGACCACAGGCCCCTCGCGTCTCCGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556418.1
3UTR-3UTR GCA 90 bp TCCCTCCAGGTGAGTTCCCTGCACCCCAGGCGCAATGCTGGGCACGGAGGGCAGCTCCGTCTTAGTGGCTaGCTCAGGGCTCCTTGTCCT +
Preference number: 2 (lower is better)
Translates to: SLQVSSLHPRRNAGHGGQLRLSG*LRAPCP
Trigger: AGGACAAGGAGCCCTGAGGCAGCCACTAAGACGGAG...CTGCCCTCCGTGCCCAGCATTGCGCCTGGGGTGCAGGGAACTCACCTGGAGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556418.1
3UTR-3UTR CCA 90 bp CGACACCCTGAGGTGCTCCTGAGATGCTGGGTCCACCCTGAGTGGCACGGGGAGGGGCACGTCATGGAATaGCCCATGTCCCTCTGCTGC +
Preference number: 2 (lower is better)
Translates to: RHPEVLLRCWVHPEWHGEGHVME*PMSLCC
Trigger: GCAGCAGAGGGACATGGGCCATTCCATGACGTGCCC...CTCCCCGTGCCACTCAGGGTGGACCCAGCATCTCAGGAGCACCTCAGGGTGTCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
3UTR-3UTR CCA 90 bp CGACACCCTGAGGTGCTCCTGAGATGCTGGGTCCACCCTGAGTGGCACGGGGAGGGCCTGGGCACGTCATaGAATGGCCCATGTCCCTCT +
Preference number: 2 (lower is better)
Translates to: RHPEVLLRCWVHPEWHGEGLGTS*NGPCPS
Trigger: AGAGGGACATGGGCCATTCCATGACGTGCCCAGGCC...CTCCCCGTGCCACTCAGGGTGGACCCAGCATCTCAGGAGCACCTCAGGGTGTCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
3UTR-3UTR CCA 90 bp GTCCGCGGAGCTGGCCGTGCTTGGCGCCCTGGCGTGTGTCTAGCTGCTTCTTGCCTTGCCCTCAGGAAGTaGCCTTGGACGAGCGTCATG +
Preference number: 2 (lower is better)
Translates to: VRGAGRAWRPGVCLAASCLALRK*PWTSVM
Trigger: CATGACGCTCGTCCAAGGCCACTTCCTGAGGGCAAG...GCAAGAAGCAGCTAGACACACGCCAGGGCGCCAAGCACGGCCAGCTCCGCGGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
3UTR-3UTR CCA 90 bp AGTGGCACGGGGAGCAGCTGTGGCCGGTGCTCCTTCCTAGGCCAGTCCTGGGGAGGGACTCATGGGGAATaGCCTGAGGAGCTACGTGTG +
Preference number: 2 (lower is better)
Translates to: SGTGSSCGRCSFLGQSWGGTHGE*PEELRV
Trigger: CACACGTAGCTCCTCAGGCCATTCCCCATGAGTCCC...TCCCCAGGACTGGCCTAGGAAGGAGCACCGGCCACAGCTGCTCCCCGTGCCACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
3UTR-3UTR CCA 90 bp GCTCCAGGGCCCCGTAGGTGGTGGTCAGATAGTAGGAACCCTCCCCCAGCTGCAAGGTGGCATCAGAGGTaGGCGGCAAAGGGCGTGCAG +
Preference number: 2 (lower is better)
Translates to: APGPRRWWSDSRNPPPAARWHQR*AAKGVQ
Trigger: CTGCACGCCCTTTGCCGCCCACCTCTGATGCCACCT...TGCAGCTGGGGGAGGGTTCCTACTATCTGACCACCACCTACGGGGCCCTGGAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000555589.5
3UTR-3UTR CCA 90 bp CTGCTCCAGCTCCTCCTCCGTGCTGCTGGTGGAGTAGGAGTCCTGGTCGGTGGCACTGGAGGCTGCCCCTaGCTTCATCGCTTCCTCCCT +
Preference number: 2 (lower is better)
Translates to: LLQLLLRAAGGVGVLVGGTGGCP*LHRFLP
Trigger: AGGGAGGAAGCGATGAAGCCAGGGGCAGCCTCCAGT...GCCACCGACCAGGACTCCTACTCCACCAGCAGCACGGAGGAGGAGCTGGAGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555589.5
3UTR-3UTR CCA 90 bp CCTCCCTGGATGGATAGCGGGTGGCGGGCGCCAAGCTGTCTGCGAGTCCGGCACGGTTACGCAGACCCTTaGCAGCTGCTGCATTTGTCC +
Preference number: 2 (lower is better)
Translates to: PPWMDSGWRAPSCLRVRHGYADP*QLLHLS
Trigger: GGACAAATGCAGCAGCTGCCAAGGGTCTGCGTAACC...GTGCCGGACTCGCAGACAGCTTGGCGCCCGCCACCCGCTATCCATCCAGGGAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556418.1
3UTR-3UTR CCA 90 bp CGAGGCCGGGCTCCTGTCAAGAGCTTCACGGGGACCGCCCATTTCTTCCAGGAGTGGGCTGGGCATGTTTaGGGAACTGGGGGCAGCTGG +
Preference number: 2 (lower is better)
Translates to: RGRAPVKSFTGTAHFFQEWAGHV*GTGGSW
Trigger: CCAGCTGCCCCCAGTTCCCCAAACATGCCCAGCCCA...CTCCTGGAAGAAATGGGCGGTCCCCGTGAAGCTCTTGACAGGAGCCCGGCCTCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000556418.1
3UTR-3UTR CCA 90 bp TGGATAGCGGGTGGCGGGCGCCAAGCTGTCTGCGAGTCCGGCACCTGCGCCTTTGAAGTACGGGATGCCTaGGCCAGGCTTGGACCAAGA +
Preference number: 2 (lower is better)
Translates to: WIAGGGRQAVCESGTCAFEVRDA*ARLGPR
Trigger: TCTTGGTCCAAGCCTGGCCCAGGCATCCCGTACTTC...AAAGGCGCAGGTGCCGGACTCGCAGACAGCTTGGCGCCCGCCACCCGCTATCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556418.1
3UTR-3UTR CCA 90 bp TCCCTCCAGGTGAGTTCCCTGCACCCCAGGCGCAATGCTGGGCACGGAGGGCAGGACCGTGATGGCAACTaGTGGCTAGGGCTTAGGCGA +
Preference number: 2 (lower is better)
Translates to: SLQVSSLHPRRNAGHGGQDRDGN*WLGLRR
Trigger: TCGCCTAAGCCCTAGCCACCAGTTGCCATCACGGTC...CTGCCCTCCGTGCCCAGCATTGCGCCTGGGGTGCAGGGAACTCACCTGGAGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556418.1
3UTR-3UTR TCA 90 bp CGACACCCTGAGGTGCTCCTGAGATGCTGGGTCCACCCTGAGTGGCACGGGGAGCTGAGGAGCTACGTGTaGAGAGGGCGCCGGTTTGTT +
Preference number: 2 (lower is better)
Translates to: RHPEVLLRCWVHPEWHGELRSYV*RGRRFV
Trigger: AACAAACCGGCGCCCTCTTCACACGTAGCTCCTCAG...CTCCCCGTGCCACTCAGGGTGGACCCAGCATCTCAGGAGCACCTCAGGGTGTCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
3UTR-3UTR TCA 90 bp ATGGGTCCGCGGAGCTGGCCGTGCTTGGCGCCCTGGCGTGTGTCTAGCTGCTTCTCATGGGGAATGGCCTaGGGAGCTACGTGTGAAGAG +
Preference number: 2 (lower is better)
Translates to: MGPRSWPCLAPWRVSSCFSWGMA*GATCEE
Trigger: CTCTTCACACGTAGCTCCTCAGGCCATTCCCCATGA...GAAGCAGCTAGACACACGCCAGGGCGCCAAGCACGGCCAGCTCCGCGGACCCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
3UTR-3UTR GCA 90 bp TGCCGGGCACAGAGCTGCGGGGTCTGGGGGCACCGGGAGCTAAGAGCAGGCTCTAGGGCTATTAGGACTTaGCCTCAGGAAGTGGCCTTG +
Preference number: 2 (lower is better)
Translates to: CRAQSCGVWGHRELRAGSRAIRT*PQEVAL
Trigger: CAAGGCCACTTCCTGAGGGCAAGTCCTAATAGCCCT...AGAGCCTGCTCTTAGCTCCCGGTGCCCCCAGACCCCGCAGCTCTGTGCCCGGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
3UTR-3UTR GCA 90 bp GTGGTCACACCTAGGTCAGTGGTGGTGGTGGCCAGGATCACTAACTGGTTCTCCGGGGCGGGGACCTGCTaGAAGGGACTGGAGGCTGCC +
Preference number: 2 (lower is better)
Translates to: VVTPRSVVVVARITNWFSGAGTC*KGLEAA
Trigger: GGCAGCCTCCAGTCCCTTGCAGCAGGTCCCCGCCCC...GGAGAACCAGTTAGTGATCCTGGCCACCACCACCACTGACCTAGGTGTGACCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555589.5
3UTR-3UTR GCA 90 bp CGAGCCTTGCCCAGGATCATGGAGGGCTTCTTCTTCACGCTGGGGCTGCTGAACGAGCTGGTCCCCCTCTaGCGCCATCCCCGGACTTTG +
Preference number: 2 (lower is better)
Translates to: RALPRIMEGFFFTLGLLNELVPL*RHPRTL
Trigger: CAAAGTCCGGGGATGGCGGCAGAGGGGGACCAGCTC...GTTCAGCAGCCCCAGCGTGAAGAAGAAGCCCTCCATGATCCTGGGCAAGGCTCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000555589.5
3UTR-3UTR GCA 90 bp TGGATAGCGGGTGGCGGGCGCCAAGCTGTCTGCGAGTCCGGCACCTGCGCCTTTGTGTCTCATTCCTCCTaGACCCTTCCTGCTTGCCCA +
Preference number: 2 (lower is better)
Translates to: WIAGGGRQAVCESGTCAFVSHSS*TLPACP
Trigger: TGGGCAAGCAGGAAGGGTGCAGGAGGAATGAGACAC...AAAGGCGCAGGTGCCGGACTCGCAGACAGCTTGGCGCCCGCCACCCGCTATCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556418.1
3UTR-3UTR GCA 90 bp CCTCCCTGGATGGATAGCGGGTGGCGGGCGCCAAGCTGTCTGCGAGTCCGGCACACCCTTGGCAGCTGCTaGATTTGTCCAGGGACTAAG +
Preference number: 2 (lower is better)
Translates to: PPWMDSGWRAPSCLRVRHTLGSC*ICPGTK
Trigger: CTTAGTCCCTGGACAAATGCAGCAGCTGCCAAGGGT...GTGCCGGACTCGCAGACAGCTTGGCGCCCGCCACCCGCTATCCATCCAGGGAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556418.1
3UTR-3UTR CCA 90 bp CGACACCCTGAGGTGCTCCTGAGATGCTGGGTCCACCCTGAGTGGCACGGGGAGGGGACTCATGGGGAATaGCCTGAGGAGCTACGTGTG +
Preference number: 2 (lower is better)
Translates to: RHPEVLLRCWVHPEWHGEGTHGE*PEELRV
Trigger: CACACGTAGCTCCTCAGGCCATTCCCCATGAGTCCC...CTCCCCGTGCCACTCAGGGTGGACCCAGCATCTCAGGAGCACCTCAGGGTGTCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
3UTR-3UTR CCA 90 bp CTGCTCCAGCTCCTCCTCCGTGCTGCTGGTGGAGTAGGAGTCCTGGTCGGTGGCTTCACCTCTGTGTCCTaGCCTTGCTCCGTGCTCTCC +
Preference number: 2 (lower is better)
Translates to: LLQLLLRAAGGVGVLVGGFTSVS*PCSVLS
Trigger: GGAGAGCACGGAGCAAGGCCAGGACACAGAGGTGAA...GCCACCGACCAGGACTCCTACTCCACCAGCAGCACGGAGGAGGAGCTGGAGCAG
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555589.5
3UTR-3UTR CCA 90 bp TGCTGCTCGGGCTCCAGGTACGACACGCAGATGAAGTCCTGTACGGAGGAGCGGGCTCCCAGCGGTGGATaGAGTCCTGCACCTCCACAC +
Preference number: 2 (lower is better)
Translates to: CCSGSRYDTQMKSCTEERAPSGG*SPAPPH
Trigger: GTGTGGAGGTGCAGGACTCCATCCACCGCTGGGAGC...CCGCTCCTCCGTACAGGACTTCATCTGCGTGTCGTACCTGGAGCCCGAGCAGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555589.5
3UTR-3UTR CCA 90 bp AAGGGAGGTGCGAGCCCGCCCGGGCATCCCATAGTGCGGGCGGGCAACACAGTCGCATGTTTGGGGAACTaGGGGCAGCTGGATTTGATG +
Preference number: 2 (lower is better)
Translates to: KGGASPPGHPIVRAGNTVACLGN*GQLDLM
Trigger: CATCAAATCCAGCTGCCCCCAGTTCCCCAAACATGC...GACTGTGTTGCCCGCCCGCACTATGGGATGCCCGGGCGGGCTCGCACCTCCCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556418.1
3UTR-3UTR CCA 90 bp CCTCCCTGGATGGATAGCGGGTGGCGGGCGCCAAGCTGTCTGCGAGTCCGGCACAGCTCTGGATGTGCCTaGCTCACTAGTCCAACTCTC +
Preference number: 2 (lower is better)
Translates to: PPWMDSGWRAPSCLRVRHSSGCA*LTSPTL
Trigger: GAGAGTTGGACTAGTGAGCCAGGCACATCCAGAGCT...GTGCCGGACTCGCAGACAGCTTGGCGCCCGCCACCCGCTATCCATCCAGGGAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556418.1
3UTR-3UTR TCA 90 bp TCAGTGGTGGTGGTGGCCAGGATCACTAACTGGTTCTCCTTGAGCTGCTGCAGCCACCCCCAAGCTGTCTaGGAGGGAGGCCAGGGAGCC +
Preference number: 2 (lower is better)
Translates to: SVVVVARITNWFSLSCCSHPQAV*EGGQGA
Trigger: GGCTCCCTGGCCTCCCTCTCAGACAGCTTGGGGGTG...GCTGCAGCAGCTCAAGGAGAACCAGTTAGTGATCCTGGCCACCACCACCACTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555589.5
3UTR-3UTR TCA 90 bp CGTGAGGTTGCTGCGGGCCAGCACATACATGAGCACAGGCAGGAAGTCATCCGCCCTGGTCGGTGGCCATaGCAGACACCCCCAAGCTGT +
Preference number: 2 (lower is better)
Translates to: REVAAGQHIHEHRQEVIRPGRWP*QTPPSC
Trigger: ACAGCTTGGGGGTGTCTGTCATGGCCACCGACCAGG...GCGGATGACTTCCTGCCTGTGCTCATGTATGTGCTGGCCCGCAGCAACCTCACG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555589.5
3UTR-3UTR TCA 90 bp GTCCTGTACGGAGGAGCGGGAGGCCCGGGCCTTGTTGAGAGTACGCCGGCGCTCGATCTGATGCAGGCATaGGTTGATGGCTTCCTTCAG +
Preference number: 2 (lower is better)
Translates to: VLYGGAGGPGLVESTPALDLMQA*VDGFLQ
Trigger: CTGAAGGAAGCCATCAACTCATGCCTGCATCAGATC...GAGCGCCGGCGTACTCTCAACAAGGCCCGGGCCTCCCGCTCCTCCGTACAGGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555589.5
3UTR-3UTR TCA 90 bp TCCCTCCAGGTGAGTTCCCTGCACCCCAGGCGCAATGCTGGGCACGGAGGGCAGTTAAAGGATGGGCAGTaGCAGCCAGTGAAGAAGGGG +
Preference number: 2 (lower is better)
Translates to: SLQVSSLHPRRNAGHGGQLKDGQ*QPVKKG
Trigger: CCCCTTCTTCACTGGCTGTCACTGCCCATCCTTTAA...CTGCCCTCCGTGCCCAGCATTGCGCCTGGGGTGCAGGGAACTCACCTGGAGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556418.1
3UTR-3UTR GCA 90 bp TGCAGGGGTGGAGGCCTGTCTCTTAACCGACACCCTGAGGTGCTCCTGAGATGCAGCAGCTGTGGCCGGTaGTCCTTCCTAGGCCAGTCC +
Preference number: 2 (lower is better)
Translates to: CRGGGLSLNRHPEVLLRCSSCGR*SFLGQS
Trigger: GGACTGGCCTAGGAAGGAGCACCGGCCACAGCTGCT...GCATCTCAGGAGCACCTCAGGGTGTCGGTTAAGAGACAGGCCTCCACCCCTGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
3UTR-3UTR GCA 90 bp CAGGGCCCCGTAGGTGGTGGTCAGATAGTAGGAACCCTCCCCCAGCTGCAGGGCGTCTCTTGGGGGCTCTaGTGGCTTCCCTCTTTCTTG +
Preference number: 2 (lower is better)
Translates to: QGPVGGGQIVGTLPQLQGVSWGL*WLPSFL
Trigger: CAAGAAAGAGGGAAGCCAGCAGAGCCCCCAAGAGAC...GCCCTGCAGCTGGGGGAGGGTTCCTACTATCTGACCACCACCTACGGGGCCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000555589.5
3UTR-3UTR GCA 90 bp TGGTCTGCTCTGGGTGTCAGAGGAGTGAGTCTGCATAGCTGCTCACAGCTCTGGCCAGCCCCTGCAGGGTaGTGGGTCCTAGGAGGGGCT +
Preference number: 2 (lower is better)
Translates to: WSALGVRGVSLHSCSQLWPAPAG*WVLGGA
Trigger: AGCCCCTCCTAGGACCCAGCACCCTGCAGGGGCTGG...CCAGAGCTGTGAGCAGCTATGCAGACTCACTCCTCTGACACCCAGAGCAGACCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556418.1
3UTR-3UTR CCA 90 bp TCTCCCCACACGATGGCTCCTGCAATCTGCCACAGCTCTGGGGCGTGTCCTGTACCTGCGACGTTGGCCTaGGCACGTCATGGAATGGCC +
Preference number: 2 (lower is better)
Translates to: SPHTMAPAICHSSGACPVPATLA*ARHGMA
Trigger: GGCCATTCCATGACGTGCCCAGGCCAACGTCGCAGG...TACAGGACACGCCCCAGAGCTGTGGCAGATTGCAGGAGCCATCGTGTGGGGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
3UTR-3UTR CCA 90 bp GTGGTCACACCTAGGTCAGTGGTGGTGGTGGCCAGGATCACTAACTGGTTCTCCGGCGTGGGGCCCACCTaGAGGTGGGTGAGGTGGCAT +
Preference number: 2 (lower is better)
Translates to: VVTPRSVVVVARITNWFSGVGPT*RWVRWH
Trigger: ATGCCACCTCACCCACCTCCAGGTGGGCCCCACGCC...GGAGAACCAGTTAGTGATCCTGGCCACCACCACCACTGACCTAGGTGTGACCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555589.5
3UTR-3UTR CCA 90 bp CGAGCCTTGCCCAGGATCATGGAGGGCTTCTTCTTCACGCTGGGGCTGCTGAACATGGTCTGGGGGACCTaGGGCATGGGGTGTGACGTG +
Preference number: 2 (lower is better)
Translates to: RALPRIMEGFFFTLGLLNMVWGT*GMGCDV
Trigger: CACGTCACACCCCATGCCCCAGGTCCCCCAGACCAT...GTTCAGCAGCCCCAGCGTGAAGAAGAAGCCCTCCATGATCCTGGGCAAGGCTCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000555589.5
3UTR-3UTR CCA 90 bp GTACGAGCCCTTGTCCTGCGCCAGCTCCACCACCTTCTTGTACAGCTTGCGGTTTTGGCCCTCTCTGGGTaGACCCGGCGTGGGTGTCTC +
Preference number: 2 (lower is better)
Translates to: VRALVLRQLHHLLVQLAVLALSG*TRRGCL
Trigger: GAGACACCCACGCCGGGTCCACCCAGAGAGGGCCAA...AACCGCAAGCTGTACAAGAAGGTGGTGGAGCTGGCGCAGGACAAGGGCTCGTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555589.5
3UTR-3UTR CCA 90 bp GCAGCCAGTGAACTGGGCTGGGCATGTTTGGGGAACTGGGGGCAGCTGGATTTGTGGGGGCCCTTCCTCTaGTGTGGGGAGTCTCACTGC +
Preference number: 2 (lower is better)
Translates to: AASELGWACLGNWGQLDLWGPFL*CGESHC
Trigger: GCAGTGAGACTCCCCACACCAGAGGAAGGGCCCCCA...CAAATCCAGCTGCCCCCAGTTCCCCAAACATGCCCAGCCCAGTTCACTGGCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000556418.1
3UTR-3UTR CCA 90 bp TGGATAGCGGGTGGCGGGCGCCAAGCTGTCTGCGAGTCCGGCACCTGCGCCTTTCATAGTCAGCCTGTGTaGGCAGGAAAACTGAGTCCC +
Preference number: 2 (lower is better)
Translates to: WIAGGGRQAVCESGTCAFHSQPV*AGKLSP
Trigger: GGGACTCAGTTTTCCTGCCCACACAGGCTGACTATG...AAAGGCGCAGGTGCCGGACTCGCAGACAGCTTGGCGCCCGCCACCCGCTATCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556418.1
3UTR-3UTR TCA 90 bp TGGTCTGCTCTGGGTGTCAGAGGAGTGAGTCTGCATAGCTGCTCACAGCTCTGGGGGGGCAGCTGGATTTaGTGCAGCCTGGGGGTGGGT +
Preference number: 2 (lower is better)
Translates to: WSALGVRGVSLHSCSQLWGGSWI*CSLGVG
Trigger: ACCCACCCCCAGGCTGCATCAAATCCAGCTGCCCCC...CCAGAGCTGTGAGCAGCTATGCAGACTCACTCCTCTGACACCCAGAGCAGACCA
61% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000556418.1
3UTR-3UTR GCA 90 bp ATTCTCCCCACACGATGGCTCCTGCAATCTGCCACAGCTCTGGGGCGTGTCCTGGAGGTGCTCCTGAGATaGTGGGTCCACCCTGAGTGG +
Preference number: 2 (lower is better)
Translates to: ILPTRWLLQSATALGRVLEVLLR*WVHPEW
Trigger: CCACTCAGGGTGGACCCAGCATCTCAGGAGCACCTC...CAGGACACGCCCCAGAGCTGTGGCAGATTGCAGGAGCCATCGTGTGGGGAGAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
3UTR-3UTR GCA 90 bp CGAGCCTTGCCCAGGATCATGGAGGGCTTCTTCTTCACGCTGGGGCTGCTGAACGGGCGGCAAAGGGCGTaGAGGGCAATTTCCAAGAGG +
Preference number: 2 (lower is better)
Translates to: RALPRIMEGFFFTLGLLNGRQRA*RAISKR
Trigger: CCTCTTGGAAATTGCCCTGCACGCCCTTTGCCGCCC...GTTCAGCAGCCCCAGCGTGAAGAAGAAGCCCTCCATGATCCTGGGCAAGGCTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555589.5
3UTR-3UTR GCA 90 bp GTGGTCACACCTAGGTCAGTGGTGGTGGTGGCCAGGATCACTAACTGGTTCTCCTCTGTGTCCTGGCCTTaGTCCGTGCTCTCCCGGGGC +
Preference number: 2 (lower is better)
Translates to: VVTPRSVVVVARITNWFSSVSWP*SVLSRG
Trigger: GCCCCGGGAGAGCACGGAGCAAGGCCAGGACACAGA...GGAGAACCAGTTAGTGATCCTGGCCACCACCACCACTGACCTAGGTGTGACCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555589.5
3UTR-3UTR GCA 90 bp GTGCTGGAGCTGGCTCACACCCGCCAGGGAGAGCCGACTGCATACACTTCTTTCTGTGGGGAGTCTCACTaGTCCCCTAAGGCAGGGCTG +
Preference number: 2 (lower is better)
Translates to: VLELAHTRQGEPTAYTSFCGESH*SPKAGL
Trigger: CAGCCCTGCCTTAGGGGAGCAGTGAGACTCCCCACA...GAAAGAAGTGTATGCAGTCGGCTCTCCCTGGCGGGTGTGAGCCAGCTCCAGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556418.1
3UTR-3UTR CCA 90 bp CGAGCCTTGCCCAGGATCATGGAGGGCTTCTTCTTCACGCTGGGGCTGCTGAACGTCATCATGGGCGGCTaGTTCGGATGGTCTGGGGGA +
Preference number: 2 (lower is better)
Translates to: RALPRIMEGFFFTLGLLNVIMGG*FGWSGG
Trigger: TCCCCCAGACCATCCGAACCAGCCGCCCATGATGAC...GTTCAGCAGCCCCAGCGTGAAGAAGAAGCCCTCCATGATCCTGGGCAAGGCTCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000555589.5
3UTR-3UTR CCA 90 bp CCGAGCCTTGCCCAGGATCATGGAGGGCTTCTTCTTCACGCTGGGGCTGCTGAAGCCTGCAGTGGGGCATaGGAGTCTCTCGCAGGTCAT +
Preference number: 2 (lower is better)
Translates to: PSLAQDHGGLLLHAGAAEACSGA*ESLAGH
Trigger: ATGACCTGCGAGAGACTCCCATGCCCCACTGCAGGC...TTCAGCAGCCCCAGCGTGAAGAAGAAGCCCTCCATGATCCTGGGCAAGGCTCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555589.5
3UTR-3UTR CCA 90 bp TGCTGCTCGGGCTCCAGGTACGACACGCAGATGAAGTCCTGTACGGAGGAGCGGGGGCCCCGTAGGTGGTaGTCAGATAGTAGGAACCCT +
Preference number: 2 (lower is better)
Translates to: CCSGSRYDTQMKSCTEERGPRRW*SDSRNP
Trigger: AGGGTTCCTACTATCTGACCACCACCTACGGGGCCC...CCGCTCCTCCGTACAGGACTTCATCTGCGTGTCGTACCTGGAGCCCGAGCAGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000555589.5
3UTR-3UTR CCA 90 bp TGGTCTGCTCTGGGTGTCAGAGGAGTGAGTCTGCATAGCTGCTCACAGCTCTGGGGAGGGGTGGGCCACTaGGTTGGTGGGGGTTACGCA +
Preference number: 2 (lower is better)
Translates to: WSALGVRGVSLHSCSQLWGGVGH*VGGGYA
Trigger: TGCGTAACCCCCACCAACCCAGTGGCCCACCCCTCC...CCAGAGCTGTGAGCAGCTATGCAGACTCACTCCTCTGACACCCAGAGCAGACCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000556418.1
3UTR-3UTR CCA 90 bp CGAGGCCGGGCTCCTGTCAAGAGCTTCACGGGGACCGCCCATTTCTTCCAGGAGCATCCATACTCTGCCTaGCTCAGCATCAGGAACCCC +
Preference number: 2 (lower is better)
Translates to: RGRAPVKSFTGTAHFFQEHPYSA*LSIRNP
Trigger: GGGGTTCCTGATGCTGAGCCAGGCAGAGTATGGATG...CTCCTGGAAGAAATGGGCGGTCCCCGTGAAGCTCTTGACAGGAGCCCGGCCTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556418.1
3UTR CAA 90 bp TGGAACATGCTGCTGAAACTGGCAAAGCTCAGCCGGTGCCGAGCCTaGCCCAGGATCATGGAGGGCTTCTTCTTCACGCTGGGGCTGCTG +
Preference number: 2 (lower is better)
Translates to: WNMLLKLAKLSRCRA*PRIMEGFFFTLGLL
Trigger: CAGCAGCCCCAGCGTGAAGAAGAAGCCCTCCATGATCCTGGGCAAGGCTCGGCACCGGCTGAGCTTTGCCAGTTTCAGCAGCATGTTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555589.5
3UTR-3UTR GCA 90 bp GCTGAACTGCTCCAGCTCCTCCTCCGTGCTGCTGGTGGAGTAGGAGTCCTGGTCTTCACAGGCACAGTTTaGGTCATGGGCTGTGGGCCT +
Preference number: 2 (lower is better)
Translates to: AELLQLLLRAAGGVGVLVFTGTV*VMGCGP
Trigger: AGGCCCACAGCCCATGACGCAAACTGTGCCTGTGAA...GACCAGGACTCCTACTCCACCAGCAGCACGGAGGAGGAGCTGGAGCAGTTCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555589.5
3UTR-3UTR GCA 90 bp CTGCACCTCCACACTCAGCTGCCGGGTCACCGTGATCTTGTCGTAGCTCTTGATCTGGGGCTGCTGAACTaGTCCAGCTCCTCCTCCGTG +
Preference number: 2 (lower is better)
Translates to: LHLHTQLPGHRDLVVALDLGLLN*SSSSSV
Trigger: CACGGAGGAGGAGCTGGAGCAGTTCAGCAGCCCCAG...ATCAAGAGCTACGACAAGATCACGGTGACCCGGCAGCTGAGTGTGGAGGTGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555589.5
3UTR-3UTR CCA 90 bp CGAGCCTTGCCCAGGATCATGGAGGGCTTCTTCTTCACGCTGGGGCTGCTGAACTCTCGCAGGTCATCATaGGCGGCTGGTTCGGATGGT +
Preference number: 2 (lower is better)
Translates to: RALPRIMEGFFFTLGLLNSRRSS*AAGSDG
Trigger: ACCATCCGAACCAGCCGCCCATGATGACCTGCGAGA...GTTCAGCAGCCCCAGCGTGAAGAAGAAGCCCTCCATGATCCTGGGCAAGGCTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555589.5
3UTR-3UTR CCA 90 bp AACTGGCAAAGCTCAGCCGGTGCCGAGCCTTGCCCAGGATCATGGAGGGCTTCTGTCTGGGAGGGGCAGTaGGAAGGTTCTTCTTCGCAG +
Preference number: 2 (lower is better)
Translates to: NWQSSAGAEPCPGSWRASVWEGQ*EGSSSQ
Trigger: CTGCGAAGAAGAACCTTCCCACTGCCCCTCCCAGAC...AGAAGCCCTCCATGATCCTGGGCAAGGCTCGGCACCGGCTGAGCTTTGCCAGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555589.5
3UTR-3UTR CCA 90 bp TGCTGCTCGGGCTCCAGGTACGACACGCAGATGAAGTCCTGTACGGAGGAGCGGGCCATCCCCGGACTTTaGTCTTCTAAGGACACCCTC +
Preference number: 2 (lower is better)
Translates to: CCSGSRYDTQMKSCTEERAIPGL*SSKDTL
Trigger: GAGGGTGTCCTTAGAAGACCAAAGTCCGGGGATGGC...CCGCTCCTCCGTACAGGACTTCATCTGCGTGTCGTACCTGGAGCCCGAGCAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555589.5
3UTR-3UTR CCA 90 bp CTTTGCTCCCACTGCCTGTGTGGCCTTGATTCGTCGAGCCCCGGCTGTAAAGTGGACGCACCCAAGTCCTaGACACACACTGGCAGCAGG +
Preference number: 2 (lower is better)
Translates to: LCSHCLCGLDSSSPGCKVDAPKS*THTGSR
Trigger: CCTGCTGCCAGTGTGTGTCCAGGACTTGGGTGCGTC...CACTTTACAGCCGGGGCTCGACGAATCAAGGCCACACAGGCAGTGGGAGCAAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556418.1
3UTR-3UTR CCA 90 bp CGTCTCCCAAACAGTGGGTGGTCCGTTTCATCCATACTCTGCCTGGCTCAGCATGAGGTGTGCTGGAGCTaGCTCACACCCGCCAGGGAG +
Preference number: 2 (lower is better)
Translates to: RLPNSGWSVSSILCLAQHEVCWS*LTPARE
Trigger: CTCCCTGGCGGGTGTGAGCCAGCTCCAGCACACCTC...ATGCTGAGCCAGGCAGAGTATGGATGAAACGGACCACCCACTGTTTGGGAGACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556418.1
3UTR CAA 90 bp CCCAGCTGCAGGGCGGGGTCCATGAGCTCCATCATGTACTCCACATaGAGAAGCATCTCCGTGAGGTTGCTGCGGGCCAGCACATACATG +
Preference number: 2 (lower is better)
Translates to: PSCRAGSMSSIMYST*RSISVRLLRASTYM
Trigger: CATGTATGTGCTGGCCCGCAGCAACCTCACGGAGATGCTTCTCAATGTGGAGTACATGATGGAGCTCATGGACCCCGCCCTGCAGCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555589.5
3UTR-3UTR TCA 90 bp GTGTCTCCAAGGCCATCGCCTGTGTGCAGAGCTCAGCGTTCTCTAAGGGAGCTGAGCTCTGGCATGCTGTaGGGATCGCTGGCTTTCACC +
Preference number: 2 (lower is better)
Translates to: VSPRPSPVCRAQRSLRELSSGML*GSLAFT
Trigger: GGTGAAAGCCAGCGATCCTCACAGCATGCCAGAGCT...CAGCTCCCTTAGAGAACGCTGAGCTCTGCACACAGGCGATGGCCTTGGAGACAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555589.5
3UTR-3UTR GCA 90 bp GCGTCATGTTATTTTCACAACTGTCCTGCGACGTTGGCCTGGGCACGTCATGGATGGCCCATGTCCCTCTaGTGCGTGGACGTCGCGGTC +
Preference number: 2 (lower is better)
Translates to: ASCYFHNCPATLAWARHGWPMSL*CVDVAV
Trigger: GACCGCGACGTCCACGCAGCAGAGGGACATGGGCCA...TCCATGACGTGCCCAGGCCAACGTCGCAGGACAGTTGTGAAAATAACATGACGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
3UTR-3UTR CCA 90 bp GAGAGGAAAGCGTGGAACATGCTGCTGAAACTGGCAAAGCTCAGCCGGTGCCGACCTCCTCCGTGCTGCTaGTGGAGTAGGAGTCCTGGT +
Preference number: 2 (lower is better)
Translates to: ERKAWNMLLKLAKLSRCRPPPCC*WSRSPG
Trigger: ACCAGGACTCCTACTCCACCAGCAGCACGGAGGAGG...TCGGCACCGGCTGAGCTTTGCCAGTTTCAGCAGCATGTTCCACGCTTTCCTCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555589.5
3UTR-3UTR CCA 90 bp CCTGCACCCCAGGCGCAATGCTGGGCACGGAGGGCAGCACAGATAAGAAGGGAGCTCCCAAACAGTGGGTaGTCCGTTTCATCCATACTC +
Preference number: 2 (lower is better)
Translates to: PAPQAQCWARRAAQIRRELPNSG*SVSSIL
Trigger: GAGTATGGATGAAACGGACCACCCACTGTTTGGGAG...CTCCCTTCTTATCTGTGCTGCCCTCCGTGCCCAGCATTGCGCCTGGGGTGCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556418.1
3UTR CAA 90 bp GGCCTTGGACGAGCGTCATGTTATTTTCACAACTGTCCTGCGACGTaGGCCTGGGCACGTCATGGAATGGCCCATGTCCCTCTGCTGCGT +
Preference number: 2 (lower is better)
Translates to: GLGRASCYFHNCPAT*AWARHGMAHVPLLR
Trigger: ACGCAGCAGAGGGACATGGGCCATTCCATGACGTGCCCAGGCCAACGTCGCAGGACAGTTGTGAAAATAACATGACGCTCGTCCAAGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
3UTR-3UTR GCA 90 bp GATGGCTTCCTTCAGGGGCTTCAGGACACATTTGTACAAGGCAGACTCTACAATGGCGGGGCGGGGACCTaGTGCAAGGGACTGGAGGCT +
Preference number: 2 (lower is better)
Translates to: DGFLQGLQDTFVQGRLYNGGAGT*CKGLEA
Trigger: AGCCTCCAGTCCCTTGCAGCAGGTCCCCGCCCCGCC...ATTGTAGAGTCTGCCTTGTACAAATGTGTCCTGAAGCCCCTGAAGGAAGCCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000555589.5
3UTR-3UTR GCA 90 bp TCAGTGGTGGTGGTGGCCAGGATCACTAACTGGTTCTCCTTGAGCTGCTGCAGCTGGGCAGCTCTGGCATaGTGTGAGGATCGCTGGCTT +
Preference number: 2 (lower is better)
Translates to: SVVVVARITNWFSLSCCSWAALA*CEDRWL
Trigger: AAGCCAGCGATCCTCACAGCATGCCAGAGCTGCCCA...GCTGCAGCAGCTCAAGGAGAACCAGTTAGTGATCCTGGCCACCACCACCACTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555589.5
3UTR-3UTR GCA 90 bp ACACCTAGGTCAGTGGTGGTGGTGGCCAGGATCACTAACTGGTTCTCCTTGAGCGCTCCTCCTCCGTGCTaGTGGTGGAGTAGGAGTCCT +
Preference number: 2 (lower is better)
Translates to: TPRSVVVVARITNWFSLSAPPPC*WWSRSP
Trigger: AGGACTCCTACTCCACCAGCAGCACGGAGGAGGAGC...GCTCAAGGAGAACCAGTTAGTGATCCTGGCCACCACCACCACTGACCTAGGTGT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555589.5
3UTR-3UTR GCA 90 bp AAGGGAGGTGCGAGCCCGCCCGGGCATCCCATAGTGCGGGCGGGCAACACAGTCTCTGCTTATTATAGATaGACCATCTTGAAAGCCAGG +
Preference number: 2 (lower is better)
Translates to: KGGASPPGHPIVRAGNTVSAYYR*TILKAR
Trigger: CCTGGCTTTCAAGATGGTGCATCTATAATAAGCAGA...GACTGTGTTGCCCGCCCGCACTATGGGATGCCCGGGCGGGCTCGCACCTCCCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556418.1
3UTR-3UTR CCA 90 bp GCTCCACCACCTTCTTGTACAGCTTGCGGTTGTTGGAGAGGAAAGCGTGGAACATGGAGGTGGGTGAGGTaGCATCAGAGGTGGGCGGCA +
Preference number: 2 (lower is better)
Translates to: APPPSCTACGCWRGKRGTWRWVR*HQRWAA
Trigger: TGCCGCCCACCTCTGATGCCACCTCACCCACCTCCA...TGTTCCACGCTTTCCTCTCCAACAACCGCAAGCTGTACAAGAAGGTGGTGGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555589.5
3UTR-3UTR CCA 90 bp CCGAGCCTTGCCCAGGATCATGGAGGGCTTCTTCTTCACGCTGGGGCTGCTGAATGCTGTGAGGATCGCTaGCTTTCACCTCTGTGTCCT +
Preference number: 2 (lower is better)
Translates to: PSLAQDHGGLLLHAGAAECCEDR*LSPLCP
Trigger: AGGACACAGAGGTGAAAGCCAGCGATCCTCACAGCA...TTCAGCAGCCCCAGCGTGAAGAAGAAGCCCTCCATGATCCTGGGCAAGGCTCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555589.5
3UTR-3UTR CCA 90 bp TCAGTGGTGGTGGTGGCCAGGATCACTAACTGGTTCTCCTTGAGCTGCTGCAGCAACTCTGGAGAGCTCTaGGAATGGGCAGTGGCCTGG +
Preference number: 2 (lower is better)
Translates to: SVVVVARITNWFSLSCCSNSGEL*EWAVAW
Trigger: CCAGGCCACTGCCCATTCCCAGAGCTCTCCAGAGTT...GCTGCAGCAGCTCAAGGAGAACCAGTTAGTGATCCTGGCCACCACCACCACTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555589.5
3UTR CAA 90 bp CTGCCAAAGTACGAGCCCTTGTCCTGCGCCAGCTCCACCACCTTCTaGTACAGCTTGCGGTTGTTGGAGAGGAAAGCGTGGAACATGCTG +
Preference number: 2 (lower is better)
Translates to: LPKYEPLSCASSTTF*YSLRLLERKAWNML
Trigger: CAGCATGTTCCACGCTTTCCTCTCCAACAACCGCAAGCTGTACAAGAAGGTGGTGGAGCTGGCGCAGGACAAGGGCTCGTACTTTGGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555589.5
3UTR-3UTR TCA 90 bp CTGGGAGATGAATTAAGGCGCGTCTCGGAGTCCCTGCAAAGAGGAGCCGGCGCGAACACCAATGCCTGCTaGTATGTTTCTAGACGCACC +
Preference number: 2 (lower is better)
Translates to: LGDELRRVSESLQRGAGANTNAC*YVSRRT
Trigger: GGTGCGTCTAGAAACATATCAGCAGGCATTGGTGTT...CGCGCCGGCTCCTCTTTGCAGGGACTCCGAGACGCGCCTTAATTCATCTCCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556418.1
3UTR-3UTR TCA 90 bp TCACACAGCAAGCTAGTACAGGGCTGGGGCCAGAACTCAAGCCTCCTGTCTCCCGAGCAAGGCTGTAGATaGGCCTGTGGGCTCCTTAAA +
Preference number: 2 (lower is better)
Translates to: SHSKLVQGWGQNSSLLSPEQGCR*ACGLLK
Trigger: TTTAAGGAGCCCACAGGCTCATCTACAGCCTTGCTC...GGGAGACAGGAGGCTTGAGTTCTGGCCCCAGCCCTGTACTAGCTTGCTGTGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556418.1
3UTR-3UTR GCA 90 bp ACATGCCGTCTCGGTGTCTCAGGGCTATTAGGACTTGCCCTCAGGAAGTGGCCTTTTTCACAACTGTCCTaGGACGTTGGCCTGGGCACG +
Preference number: 2 (lower is better)
Translates to: TCRLGVSGLLGLALRKWPFSQLS*DVGLGT
Trigger: CGTGCCCAGGCCAACGTCGCAGGACAGTTGTGAAAA...AGGCCACTTCCTGAGGGCAAGTCCTAATAGCCCTGAGACACCGAGACGGCATGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
3UTR-3UTR GCA 90 bp TGGTCTGCTCTGGGTGTCAGAGGAGTGAGTCTGCATAGCTGCTCACAGCTCTGGCAGACCCTTGGCAGCTaGTGCATTTGTCCAGGGACT +
Preference number: 2 (lower is better)
Translates to: WSALGVRGVSLHSCSQLWQTLGS*CICPGT
Trigger: AGTCCCTGGACAAATGCAGCAGCTGCCAAGGGTCTG...CCAGAGCTGTGAGCAGCTATGCAGACTCACTCCTCTGACACCCAGAGCAGACCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556418.1
3UTR-3UTR CCA 90 bp TCATGTTATTTTCACAACTGTCCTGCGACGTTGGCCTGGGCACGTCATGGAATGTGTCCCTCTGCTGCGTaGACGTCGCGGTCGGGAGTG +
Preference number: 2 (lower is better)
Translates to: SCYFHNCPATLAWARHGMCPSAA*TSRSGV
Trigger: CACTCCCGACCGCGACGTCCACGCAGCAGAGGGACA...CATTCCATGACGTGCCCAGGCCAACGTCGCAGGACAGTTGTGAAAATAACATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
3UTR-3UTR CCA 90 bp CGTCTCCCAAACAGTGGGTGGTCCGTTTCATCCATACTCTGCCTGGCTCAGCATGCCAGTGAACTGGGCTaGGCATGTTTGGGGAACTGG +
Preference number: 2 (lower is better)
Translates to: RLPNSGWSVSSILCLAQHASELG*ACLGNW
Trigger: CCAGTTCCCCAAACATGCCCAGCCCAGTTCACTGGC...ATGCTGAGCCAGGCAGAGTATGGATGAAACGGACCACCCACTGTTTGGGAGACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556418.1
3UTR-3UTR CCA 90 bp CTGGGAGATGAATTAAGGCGCGTCTCGGAGTCCCTGCAAAGAGGAGCCGGCGCGAGTCGTCTTAAAGGATaGGCAGTGACAGCCAGTGAA +
Preference number: 2 (lower is better)
Translates to: LGDELRRVSESLQRGAGASRLKG*AVTASE
Trigger: TTCACTGGCTGTCACTGCCCATCCTTTAAGACGACT...CGCGCCGGCTCCTCTTTGCAGGGACTCCGAGACGCGCCTTAATTCATCTCCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556418.1
3UTR CAA 90 bp CCCTTGTCCTGCGCCAGCTCCACCACCTTCTTGTACAGCTTGCGGTaGTTGGAGAGGAAAGCGTGGAACATGCTGCTGAAACTGGCAAAG +
Preference number: 2 (lower is better)
Translates to: PLSCASSTTFLYSLR*LERKAWNMLLKLAK
Trigger: CTTTGCCAGTTTCAGCAGCATGTTCCACGCTTTCCTCTCCAACAACCGCAAGCTGTACAAGAAGGTGGTGGAGCTGGCGCAGGACAAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555589.5
3UTR CAA 90 bp TACGAGCCCTTGTCCTGCGCCAGCTCCACCACCTTCTTGTACAGCTaGCGGTTGTTGGAGAGGAAAGCGTGGAACATGCTGCTGAAACTG +
Preference number: 2 (lower is better)
Translates to: YEPLSCASSTTFLYS*RLLERKAWNMLLKL
Trigger: CAGTTTCAGCAGCATGTTCCACGCTTTCCTCTCCAACAACCGCAAGCTGTACAAGAAGGTGGTGGAGCTGGCGCAGGACAAGGGCTCGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555589.5
3UTR-3UTR CCA 90 bp GATGGCTTCCTTCAGGGGCTTCAGGACACATTTGTACAAGGCAGACTCTACAATGGGCCCACCTGGAGGTaGGTGAGGTGGCATCAGAGG +
Preference number: 2 (lower is better)
Translates to: DGFLQGLQDTFVQGRLYNGPTWR*VRWHQR
Trigger: CCTCTGATGCCACCTCACCCACCTCCAGGTGGGCCC...ATTGTAGAGTCTGCCTTGTACAAATGTGTCCTGAAGCCCCTGAAGGAAGCCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555589.5
3UTR-3UTR CCA 90 bp GCTCCACCACCTTCTTGTACAGCTTGCGGTTGTTGGAGAGGAAAGCGTGGAACAGGAGCCCTTGAACTCTaGAGAGCTCTGGGAATGGGC +
Preference number: 2 (lower is better)
Translates to: APPPSCTACGCWRGKRGTGALEL*RALGMG
Trigger: GCCCATTCCCAGAGCTCTCCAGAGTTCAAGGGCTCC...TGTTCCACGCTTTCCTCTCCAACAACCGCAAGCTGTACAAGAAGGTGGTGGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555589.5
3UTR CAA 90 bp TTGTCCTGCGCCAGCTCCACCACCTTCTTGTACAGCTTGCGGTTGTaGGAGAGGAAAGCGTGGAACATGCTGCTGAAACTGGCAAAGCTC +
Preference number: 2 (lower is better)
Translates to: LSCASSTTFLYSLRL*ERKAWNMLLKLAKL
Trigger: GAGCTTTGCCAGTTTCAGCAGCATGTTCCACGCTTTCCTCTCCAACAACCGCAAGCTGTACAAGAAGGTGGTGGAGCTGGCGCAGGACAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555589.5
3UTR-3UTR TCA 90 bp TGGTCTGCTCTGGGTGTCAGAGGAGTGAGTCTGCATAGCTGCTCACAGCTCTGGGGGGCGGGACTGGTTTaGATACTGAGTCTGTATAGA +
Preference number: 2 (lower is better)
Translates to: WSALGVRGVSLHSCSQLWGAGLV*ILSLYR
Trigger: TCTATACAGACTCAGTATTCAAACCAGTCCCGCCCC...CCAGAGCTGTGAGCAGCTATGCAGACTCACTCCTCTGACACCCAGAGCAGACCA
54% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000556418.1
3UTR-3UTR CCA 90 bp GTACGAGCCCTTGTCCTGCGCCAGCTCCACCACCTTCTTGTACAGCTTGCGGTTTTGGAGAGGAAAGCGTaGAACATGCTGCTGAAACTG +
Preference number: 2 (lower is better)
Translates to: VRALVLRQLHHLLVQLAVLERKA*NMLLKL
Trigger: CAGTTTCAGCAGCATGTTCCACGCTTTCCTCTCCAA...AACCGCAAGCTGTACAAGAAGGTGGTGGAGCTGGCGCAGGACAAGGGCTCGTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555589.5
3UTR CAA 90 bp TCTCGGTGTCTCAGGGCTATTAGGACTTGCCCTCAGGAAGTGGCCTaGGACGAGCGTCATGTTATTTTCACAACTGTCCTGCGACGTTGG +
Preference number: 2 (lower is better)
Translates to: SRCLRAIRTCPQEVA*DERHVIFTTVLRRW
Trigger: CCAACGTCGCAGGACAGTTGTGAAAATAACATGACGCTCGTCCAAGGCCACTTCCTGAGGGCAAGTCCTAATAGCCCTGAGACACCGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
3UTR CAA 90 bp ATGAGCTCCATCATGTACTCCACATTGAGAAGCATCTCCGTGAGGTaGCTGCGGGCCAGCACATACATGAGCACAGGCAGGAAGTCATCC +
Preference number: 2 (lower is better)
Translates to: MSSIMYSTLRSISVR*LRASTYMSTGRKSS
Trigger: GGATGACTTCCTGCCTGTGCTCATGTATGTGCTGGCCCGCAGCAACCTCACGGAGATGCTTCTCAATGTGGAGTACATGATGGAGCTCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555589.5
3UTR-3UTR TCA 90 bp CCTGCACCCCAGGCGCAATGCTGGGCACGGAGGGCAGCACAGATAAGAAGGGAGAGTCAGTTATTAAATTaGTTAGCCATAGTCAGCCTG +
Preference number: 2 (lower is better)
Translates to: PAPQAQCWARRAAQIRRESQLLN*LAIVSL
Trigger: CAGGCTGACTATGGCTAATCAATTTAATAACTGACT...CTCCCTTCTTATCTGTGCTGCCCTCCGTGCCCAGCATTGCGCCTGGGGTGCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556418.1
3UTR CCA 72 bp TCCCGGGGCGTGTCCTCAGGGCCGTCTGAGGTCCCTTaGGGAGGCAGGCTGAGCTGGTCCCCCTCTGCCGCC +
Preference number: 3 (lower is better)
Translates to: SRGVSSGPSEVP*GGRLSWSPSAA
Trigger: GGCGGCAGAGGGGGACCAGCTCAGCCTGCCTCCCCAAGGGACCTCAGACGGCCCTGAGGACACGCCCCGGGA
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000555589.5
3UTR CCA 72 bp GCAGGCAGAGAGGCTGCGCGCGGGGCTGCCCCCTTGTaGCCGGATTGGGAACAGCAGGCCTGCGCGGGAAGC +
Preference number: 3 (lower is better)
Translates to: AGREAARGAAPL*PDWEQQACAGS
Trigger: GCTTCCCGCGCAGGCCTGCTGTTCCCAATCCGGCCACAAGGGGGCAGCCCCGCGCGCAGCCTCTCTGCCTGC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000556418.1
3UTR GCA 72 bp GCCTGGGTGTCCGCCCGCGACGCCAGCGTCCGCGCCTaGTGCTCGGGCTCCAGGTACGACACGCAGATGAAG +
Preference number: 3 (lower is better)
Translates to: AWVSARDASVRA*CSGSRYDTQMK
Trigger: CTTCATCTGCGTGTCGTACCTGGAGCCCGAGCAGCAGGCGCGGACGCTGGCGTCGCGGGCGGACACCCAGGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555589.5
ENST00000556418.1
3UTR GCA 72 bp GCTCAGGGCTGCAGGCAGAGAGGCTGCGCGCGGGGCTaGCCCCTTGTGGCCGGATTGGGAACAGCAGGCCTG +
Preference number: 3 (lower is better)
Translates to: AQGCRQRGCARG*PLVAGLGTAGL
Trigger: CAGGCCTGCTGTTCCCAATCCGGCCACAAGGGGGCAGCCCCGCGCGCAGCCTCTCTGCCTGCAGCCCTGAGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556418.1
3UTR CCA 72 bp GAGGCGGGGCTGGGCTTGTCCATGGGTCCGCGGAGCTaGCCGTGCTTGGCGCCCTGGCGTGTGTCTAGCTGC +
Preference number: 3 (lower is better)
Translates to: EAGLGLSMGPRS*PCLAPWRVSSC
Trigger: GCAGCTAGACACACGCCAGGGCGCCAAGCACGGCCAGCTCCGCGGACCCATGGACAAGCCCAGCCCCGCCTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
3UTR CCA 72 bp ATAGCGCCCGCCTCCCATAAATGGGCGAGCAGGCGCTaGAAGCTCCGGCCCGGAGCGGCCTCGCCTTCCCCG +
Preference number: 3 (lower is better)
Translates to: IAPASHKWASRR*KLRPGAASPSP
Trigger: CGGGGAAGGCGAGGCCGCTCCGGGCCGGAGCTTCCAGCGCCTGCTCGCCCATTTATGGGAGGCGGGCGCTAT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556418.1
3UTR GCA 72 bp CGTGCTTGGCGCCCTGGCGTGTGTCTAGCTGCTTCTTaGCGGGCACAGAGCTGCGGGGTCTGGGGGCACCGG +
Preference number: 3 (lower is better)
Translates to: RAWRPGVCLAAS*RAQSCGVWGHR
Trigger: CCGGTGCCCCCAGACCCCGCAGCTCTGTGCCCGGCAAGAAGCAGCTAGACACACGCCAGGGCGCCAAGCACG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
3UTR GCA 72 bp TGGGTGTCCGCCCGCGACGCCAGCGTCCGCGCCTGCTaGTCGGGCTCCAGGTACGACACGCAGATGAAGTCC +
Preference number: 3 (lower is better)
Translates to: WVSARDASVRAC*SGSRYDTQMKS
Trigger: GGACTTCATCTGCGTGTCGTACCTGGAGCCCGAGCAGCAGGCGCGGACGCTGGCGTCGCGGGCGGACACCCA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555589.5
ENST00000556418.1
3UTR CCA 72 bp ACGCAGATGAAGTCCTGCGGAGACGCGAGGGGCCTGTaGTCACGGCGGGGCCCTGTCTCCTCAGGCGCCCTC +
Preference number: 3 (lower is better)
Translates to: TQMKSCGDARGL*SRRGPVSSGAL
Trigger: GAGGGCGCCTGAGGAGACAGGGCCCCGCCGTGACCACAGGCCCCTCGCGTCTCCGCAGGACTTCATCTGCGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556418.1
3UTR-3UTR CAA 90 bp AGTGGCACGGGGAGCAGCTGTGGCCGGTGCTCCTTCCTAGGCCAGTCCTGGGGAGAGGGCGCCGGTTTGTaGGCTGCAGCGGCCTGGAGC +
Preference number: 3 (lower is better)
Translates to: SGTGSSCGRCSFLGQSWGEGAGL*AAAAWS
Trigger: GCTCCAGGCCGCTGCAGCCAACAAACCGGCGCCCTC...TCCCCAGGACTGGCCTAGGAAGGAGCACCGGCCACAGCTGCTCCCCGTGCCACT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
3UTR-3UTR CAA 90 bp GTCCTGTACGGAGGAGCGGGAGGCCCGGGCCTTGTTGAGAGTACGCCGGCGCTCAGCCGGTGCCGAGCCTaGCCCAGGATCATGGAGGGC +
Preference number: 3 (lower is better)
Translates to: VLYGGAGGPGLVESTPALSRCRA*PRIMEG
Trigger: GCCCTCCATGATCCTGGGCAAGGCTCGGCACCGGCT...GAGCGCCGGCGTACTCTCAACAAGGCCCGGGCCTCCCGCTCCTCCGTACAGGAC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555589.5
3UTR-3UTR CAA 90 bp CCTCCCTGGATGGATAGCGGGTGGCGGGCGCCAAGCTGTCTGCGAGTCCGGCACGGGTGGGCCACTGGGTaGGTGGGGGTTACGCAGACC +
Preference number: 3 (lower is better)
Translates to: PPWMDSGWRAPSCLRVRHGWATG*VGVTQT
Trigger: GGTCTGCGTAACCCCCACCAACCCAGTGGCCCACCC...GTGCCGGACTCGCAGACAGCTTGGCGCCCGCCACCCGCTATCCATCCAGGGAGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000556418.1
3UTR TCA 72 bp CCGGATTGGGAACAGCAGGCCTGCGCGGGAAGCGGCTaGGGATCCCGGCTCGGCGGAGACCGTGATGGCAAC +
Preference number: 3 (lower is better)
Translates to: PDWEQQACAGSG*GSRLGGDRDGN
Trigger: GTTGCCATCACGGTCTCCGCCGAGCCGGGATCCTCAGCCGCTTCCCGCGCAGGCCTGCTGTTCCCAATCCGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556418.1
3UTR GCA 72 bp AGCTGGCCGTGCTTGGCGCCCTGGCGTGTGTCTAGCTaGTTCTTGCCGGGCACAGAGCTGCGGGGTCTGGGG +
Preference number: 3 (lower is better)
Translates to: SWPCLAPWRVSS*FLPGTELRGLG
Trigger: CCCCAGACCCCGCAGCTCTGTGCCCGGCAAGAAGCAGCTAGACACACGCCAGGGCGCCAAGCACGGCCAGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
3UTR GCA 72 bp CCTGGATGGATAGCGGGTGGCGGGCGCCAAGCTGTCTaGGAGTCCGGCACCTGCGCCTTTCCCGTCTCTGCC +
Preference number: 3 (lower is better)
Translates to: PGWIAGGGRQAV*ESGTCAFPVSA
Trigger: GGCAGAGACGGGAAAGGCGCAGGTGCCGGACTCGCAGACAGCTTGGCGCCCGCCACCCGCTATCCATCCAGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556418.1
3UTR GCA 72 bp TGCTCGGGCTCCAGGTACGACACGCAGATGAAGTCCTaGGGAGACGCGAGGGGCCTGTGGTCACGGCGGGGC +
Preference number: 3 (lower is better)
Translates to: CSGSRYDTQMKS*GDARGLWSRRG
Trigger: GCCCCGCCGTGACCACAGGCCCCTCGCGTCTCCGCAGGACTTCATCTGCGTGTCGTACCTGGAGCCCGAGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556418.1
3UTR CCA 72 bp GGCACGTCATGGAATGGCCCATGTCCCTCTGCTGCGTaGACGTCGCGGTCGGGAGTGCGCAGCCAGAGGCGG +
Preference number: 3 (lower is better)
Translates to: GTSWNGPCPSAA*TSRSGVRSQRR
Trigger: CCGCCTCTGGCTGCGCACTCCCGACCGCGACGTCCACGCAGCAGAGGGACATGGGCCATTCCATGACGTGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
3UTR TCA 72 bp AGTCCTGTACGGAGGAGCGGGAGGCCCGGGCCTTGTTaGGAGTACGCCGGCGCTCCCAGCGGTGGATGGAGT +
Preference number: 3 (lower is better)
Translates to: SPVRRSGRPGPC*EYAGAPSGGWS
Trigger: ACTCCATCCACCGCTGGGAGCGCCGGCGTACTCTCAACAAGGCCCGGGCCTCCCGCTCCTCCGTACAGGACT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555589.5
3UTR GCA 72 bp TGGCCTGGGCACGTCATGGAATGGCCCATGTCCCTCTaGTGCGTGGACGTCGCGGTCGGGAGTGCGCAGCCA +
Preference number: 3 (lower is better)
Translates to: WPGHVMEWPMSL*CVDVAVGSAQP
Trigger: TGGCTGCGCACTCCCGACCGCGACGTCCACGCAGCAGAGGGACATGGGCCATTCCATGACGTGCCCAGGCCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
3UTR CCA 72 bp TCCATGGGTCCGCGGAGCTGGCCGTGCTTGGCGCCCTaGCGTGTGTCTAGCTGCTTCTTGCCGGGCACAGAG +
Preference number: 3 (lower is better)
Translates to: SMGPRSWPCLAP*RVSSCFLPGTE
Trigger: CTCTGTGCCCGGCAAGAAGCAGCTAGACACACGCCAGGGCGCCAAGCACGGCCAGCTCCGCGGACCCATGGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
3UTR CCA 72 bp GGGCGGCAAAGGGCGTGCAGGGCAATTTCCAAGAGGTaGCTGGTCGGTGGGCAGGGCGCTGCTGCAGTCCTC +
Preference number: 3 (lower is better)
Translates to: GRQRACRAISKR*LVGGQGAAAVL
Trigger: GAGGACTGCAGCAGCGCCCTGCCCACCGACCAGCCACCTCTTGGAAATTGCCCTGCACGCCCTTTGCCGCCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555589.5
3UTR CCA 72 bp GGATCCCGGCTCGGCGGAGACCGTGATGGCAACTGGTaGCTAGGGCTTAGGCGAGGCCGGGCTCCTGTCAAG +
Preference number: 3 (lower is better)
Translates to: GSRLGGDRDGNW*LGLRRGRAPVK
Trigger: CTTGACAGGAGCCCGGCCTCGCCTAAGCCCTAGCCACCAGTTGCCATCACGGTCTCCGCCGAGCCGGGATCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556418.1
3UTR CCA 72 bp GGCTGTAAAGTGGGGATAGCGCCCGCCTCCCATAAATaGGCGAGCAGGCGCTGGAAGCTCCGGCCCGGAGCG +
Preference number: 3 (lower is better)
Translates to: GCKVGIAPASHK*ASRRWKLRPGA
Trigger: CGCTCCGGGCCGGAGCTTCCAGCGCCTGCTCGCCCATTTATGGGAGGCGGGCGCTATCCCCACTTTACAGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556418.1
3UTR-3UTR CAA 90 bp CCTGCACCCCAGGCGCAATGCTGGGCACGGAGGGCAGCACAGATAAGAAGGGAGCCCCTTGTGGCCGGATaGGGAACAGCAGGCCTGCGC +
Preference number: 3 (lower is better)
Translates to: PAPQAQCWARRAAQIRREPLVAG*GTAGLR
Trigger: GCGCAGGCCTGCTGTTCCCAATCCGGCCACAAGGGG...CTCCCTTCTTATCTGTGCTGCCCTCCGTGCCCAGCATTGCGCCTGGGGTGCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556418.1
3UTR GCA 72 bp AGAGTACGCCGGCGCTCCCAGCGGTGGATGGAGTCCTaGACCTCCACACTCAGCTGCCGGGTCACCGTGATC +
Preference number: 3 (lower is better)
Translates to: RVRRRSQRWMES*TSTLSCRVTVI
Trigger: GATCACGGTGACCCGGCAGCTGAGTGTGGAGGTGCAGGACTCCATCCACCGCTGGGAGCGCCGGCGTACTCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555589.5
3UTR CCA 72 bp CCTGAGGTGCTCCTGAGATGCTGGGTCCACCCTGAGTaGCACGGGGAGCAGCTGTGGCCGGTGCTCCTTCCT +
Preference number: 3 (lower is better)
Translates to: PEVLLRCWVHPE*HGEQLWPVLLP
Trigger: AGGAAGGAGCACCGGCCACAGCTGCTCCCCGTGCCACTCAGGGTGGACCCAGCATCTCAGGAGCACCTCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
3UTR CCA 72 bp CTGCAGTGGGGCATGGGAGTCTCTCGCAGGTCATCATaGGCGGCTGGTTCGGATGGTCTGGGGGACCTGGGG +
Preference number: 3 (lower is better)
Translates to: LQWGMGVSRRSS*AAGSDGLGDLG
Trigger: CCCCAGGTCCCCCAGACCATCCGAACCAGCCGCCCATGATGACCTGCGAGAGACTCCCATGCCCCACTGCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000555589.5
3UTR-3UTR CAA 90 bp GGAGCTGGCCGTGCTTGGCGCCCTGGCGTGTGTCTAGCTGCTTCTTGCCGGGCAAACTGTCCTGCGACGTaGGCCTGGGCACGTCATGGA +
Preference number: 3 (lower is better)
Translates to: GAGRAWRPGVCLAASCRANCPAT*AWARHG
Trigger: TCCATGACGTGCCCAGGCCAACGTCGCAGGACAGTT...TGCCCGGCAAGAAGCAGCTAGACACACGCCAGGGCGCCAAGCACGGCCAGCTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
3UTR-3UTR CAA 90 bp ATTCTCCCCACACGATGGCTCCTGCAATCTGCCACAGCTCTGGGGCGTGTCCTGGAGGGCGCCGGTTTGTaGGCTGCAGCGGCCTGGAGC +
Preference number: 3 (lower is better)
Translates to: ILPTRWLLQSATALGRVLEGAGL*AAAAWS
Trigger: GCTCCAGGCCGCTGCAGCCAACAAACCGGCGCCCTC...CAGGACACGCCCCAGAGCTGTGGCAGATTGCAGGAGCCATCGTGTGGGGAGAAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
3UTR-3UTR CAA 90 bp GCACAGAGCTGCGGGGTCTGGGGGCACCGGGAGCTAAGAGCAGGCTCTGGTGCAAGCTCGGGCCCTTCTTaGCAAAGACCGAGGATGGGG +
Preference number: 3 (lower is better)
Translates to: AQSCGVWGHRELRAGSGASSGPS*QRPRMG
Trigger: CCCCATCCTCGGTCTTTGCAAAGAAGGGCCCGAGCT...TGCACCAGAGCCTGCTCTTAGCTCCCGGTGCCCCCAGACCCCGCAGCTCTGTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
3UTR-3UTR CAA 90 bp GCTGAACTGCTCCAGCTCCTCCTCCGTGCTGCTGGTGGAGTAGGAGTCCTGGTCGGGCGGGACTGGGGGTaGTTTGGCTGTCCTGGGCAG +
Preference number: 3 (lower is better)
Translates to: AELLQLLLRAAGGVGVLVGRDWG*FGCPGQ
Trigger: CTGCCCAGGACAGCCAAACAACCCCCAGTCCCGCCC...GACCAGGACTCCTACTCCACCAGCAGCACGGAGGAGGAGCTGGAGCAGTTCAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555589.5
3UTR-3UTR CAA 90 bp TGCTGCTCGGGCTCCAGGTACGACACGCAGATGAAGTCCTGTACGGAGGAGCGGGGGTCCACCAGGGCCTaGAGCTCGGTGCTCTGCAGC +
Preference number: 3 (lower is better)
Translates to: CCSGSRYDTQMKSCTEERGSTRA*SSVLCS
Trigger: GCTGCAGAGCACCGAGCTCAAGGCCCTGGTGGACCC...CCGCTCCTCCGTACAGGACTTCATCTGCGTGTCGTACCTGGAGCCCGAGCAGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555589.5
3UTR-3UTR CAA 90 bp CGAGGCCGGGCTCCTGTCAAGAGCTTCACGGGGACCGCCCATTTCTTCCAGGAGCTGGGCTGGGCATGTTaGGGGAACTGGGGGCAGCTG +
Preference number: 3 (lower is better)
Translates to: RGRAPVKSFTGTAHFFQELGWAC*GNWGQL
Trigger: CAGCTGCCCCCAGTTCCCCAAACATGCCCAGCCCAG...CTCCTGGAAGAAATGGGCGGTCCCCGTGAAGCTCTTGACAGGAGCCCGGCCTCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000556418.1
3UTR TCA 72 bp GGGGGACTCATGGGGAATGGCCTGAGGAGCTACGTGTaGAGAGGGCGCCGGTTTGTTGGCTGCAGCGGCCTG +
Preference number: 3 (lower is better)
Translates to: GGLMGNGLRSYV*RGRRFVGCSGL
Trigger: CAGGCCGCTGCAGCCAACAAACCGGCGCCCTCTTCACACGTAGCTCCTCAGGCCATTCCCCATGAGTCCCCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
3UTR GCA 72 bp AGCCCCACACCTGCCGGGCTTTGCCTTTGCTCCCACTaGCTGTGTGGCCTTGATTCGTCGAGCCCCGGCTGT +
Preference number: 3 (lower is better)
Translates to: SPTPAGLCLCSH*LCGLDSSSPGC
Trigger: ACAGCCGGGGCTCGACGAATCAAGGCCACACAGGCAGTGGGAGCAAAGGCAAAGCCCGGCAGGTGTGGGGCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556418.1
3UTR CCA 72 bp ACTGTCCTGCGACGTTGGCCTGGGCACGTCATGGAATaGCCCATGTCCCTCTGCTGCGTGGACGTCGCGGTC +
Preference number: 3 (lower is better)
Translates to: TVLRRWPGHVME*PMSLCCVDVAV
Trigger: GACCGCGACGTCCACGCAGCAGAGGGACATGGGCCATTCCATGACGTGCCCAGGCCAACGTCGCAGGACAGT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
3UTR CCA 72 bp GGCAAAGGGCGTGCAGGGCAATTTCCAAGAGGTGGCTaGTCGGTGGGCAGGGCGCTGCTGCAGTCCTCGATG +
Preference number: 3 (lower is better)
Translates to: GKGRAGQFPRGG*SVGRALLQSSM
Trigger: CATCGAGGACTGCAGCAGCGCCCTGCCCACCGACCAGCCACCTCTTGGAAATTGCCCTGCACGCCCTTTGCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555589.5
3UTR CCA 72 bp AAGCAGGGCTTTGGCCCTCTCTGGGTGGACCCGGCGTaGGTGTCTCCAAGGCCATCGCCTGTGTGCAGAGCT +
Preference number: 3 (lower is better)
Translates to: KQGFGPLWVDPA*VSPRPSPVCRA
Trigger: AGCTCTGCACACAGGCGATGGCCTTGGAGACACCCACGCCGGGTCCACCCAGAGAGGGCCAAAGCCCTGCTT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555589.5
3UTR-3UTR CAA 90 bp CGAGGCCGGGCTCCTGTCAAGAGCTTCACGGGGACCGCCCATTTCTTCCAGGAGCTGCCTCAGGGCTCCTaGTCCTCCATTAGGCCTCCC +
Preference number: 3 (lower is better)
Translates to: RGRAPVKSFTGTAHFFQELPQGS*SSIRPP
Trigger: GGGAGGCCTAATGGAGGACAAGGAGCCCTGAGGCAG...CTCCTGGAAGAAATGGGCGGTCCCCGTGAAGCTCTTGACAGGAGCCCGGCCTCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556418.1
3UTR GCA 72 bp TGGCTTCATCGCTTCCTCCCTGAGGGGGCCCAGGCCTaGAGTGGGGCATGGGAGTCTCTCGCAGGTCATCAT +
Preference number: 3 (lower is better)
Translates to: WLHRFLPEGAQA*SGAWESLAGHH
Trigger: ATGATGACCTGCGAGAGACTCCCATGCCCCACTGCAGGCCTGGGCCCCCTCAGGGAGGAAGCGATGAAGCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000555589.5
3UTR GCA 72 bp CTCCCTCCAGGTGAGTTCCCTGCACCCCAGGCGCAATaGTGGGCACGGAGGGCAGCACAGATAAGAAGGGAG +
Preference number: 3 (lower is better)
Translates to: LPPGEFPAPQAQ*WARRAAQIRRE
Trigger: CTCCCTTCTTATCTGTGCTGCCCTCCGTGCCCAGCATTGCGCCTGGGGTGCAGGGAACTCACCTGGAGGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556418.1
3UTR-3UTR CAA 90 bp GTCCTGGGGAAACTAAGCTCGGGCCCTTCTTTGCAAAGACCGAGGATGGGGTGGGAAGAGGGCGCCGGTTaGTTGGCTGCAGCGGCCTGG +
Preference number: 3 (lower is better)
Translates to: VLGKLSSGPSLQRPRMGWEEGAG*LAAAAW
Trigger: CCAGGCCGCTGCAGCCAACAAACCGGCGCCCTCTTC...CCACCCCATCCTCGGTCTTTGCAAAGAAGGGCCCGAGCTTAGTTTCCCCAGGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
3UTR-3UTR CAA 90 bp CCTCCCTGGATGGATAGCGGGTGGCGGGCGCCAAGCTGTCTGCGAGTCCGGCACTCAGAGGAGGGGCTGTaGGAGAAACTGAGTCGTCTT +
Preference number: 3 (lower is better)
Translates to: PPWMDSGWRAPSCLRVRHSEEGL*EKLSRL
Trigger: AAGACGACTCAGTTTCTCCAACAGCCCCTCCTCTGA...GTGCCGGACTCGCAGACAGCTTGGCGCCCGCCACCCGCTATCCATCCAGGGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556418.1
3UTR-3UTR CAA 90 bp ATGGGTCCGCGGAGCTGGCCGTGCTTGGCGCCCTGGCGTGTGTCTAGCTGCTTCCCTCAGGAAGTGGCCTaGGACGAGCGTCATGTTATT +
Preference number: 3 (lower is better)
Translates to: MGPRSWPCLAPWRVSSCFPQEVA*DERHVI
Trigger: AATAACATGACGCTCGTCCAAGGCCACTTCCTGAGG...GAAGCAGCTAGACACACGCCAGGGCGCCAAGCACGGCCAGCTCCGCGGACCCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
3UTR-3UTR CAA 90 bp TCCCTCCAGGTGAGTTCCCTGCACCCCAGGCGCAATGCTGGGCACGGAGGGCAGGATGCCAAGTTGAAGTaGGCCATGGAGGACTCACAC +
Preference number: 3 (lower is better)
Translates to: SLQVSSLHPRRNAGHGGQDAKLK*AMEDSH
Trigger: GTGTGAGTCCTCCATGGCCAACTTCAACTTGGCATC...CTGCCCTCCGTGCCCAGCATTGCGCCTGGGGTGCAGGGAACTCACCTGGAGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556418.1
3UTR TCA 72 bp TGCTGCTGGTGGAGTAGGAGTCCTGGTCGGTGGCCATaGCAGACACCCCCAAGCTGTCTGAGAGGGAGGCCA +
Preference number: 3 (lower is better)
Translates to: CCWWSRSPGRWP*QTPPSCLRGRP
Trigger: TGGCCTCCCTCTCAGACAGCTTGGGGGTGTCTGTCATGGCCACCGACCAGGACTCCTACTCCACCAGCAGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555589.5
3UTR TCA 72 bp GGATCATGGAGGGCTTCTTCTTCACGCTGGGGCTGCTaGACTGCTCCAGCTCCTCCTCCGTGCTGCTGGTGG +
Preference number: 3 (lower is better)
Translates to: GSWRASSSRWGC*TAPAPPPCCWW
Trigger: CCACCAGCAGCACGGAGGAGGAGCTGGAGCAGTTCAGCAGCCCCAGCGTGAAGAAGAAGCCCTCCATGATCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555589.5
3UTR CCA 72 bp GGATCTTCTCCATCATGGGCACCTCCGGCACGCTGGTaGTCACACCTAGGTCAGTGGTGGTGGTGGCCAGGA +
Preference number: 3 (lower is better)
Translates to: GSSPSWAPPARW*SHLGQWWWWPG
Trigger: TCCTGGCCACCACCACCACTGACCTAGGTGTGACCACCAGCGTGCCGGAGGTGCCCATGATGGAGAAGATCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555589.5
3UTR CCA 72 bp GCAGGATCTTCTCCATCATGGGCACCTCCGGCACGCTaGTGGTCACACCTAGGTCAGTGGTGGTGGTGGCCA +
Preference number: 3 (lower is better)
Translates to: AGSSPSWAPPAR*WSHLGQWWWWP
Trigger: TGGCCACCACCACCACTGACCTAGGTGTGACCACCAGCGTGCCGGAGGTGCCCATGATGGAGAAGATCCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555589.5
3UTR-3UTR CAA 90 bp CTGGGAGATGAATTAAGGCGCGTCTCGGAGTCCCTGCAAAGAGGAGCCGGCGCGGGGTTACGCAGACCCTaGGCAGCTGCTGCATTTGTC +
Preference number: 3 (lower is better)
Translates to: LGDELRRVSESLQRGAGAGLRRP*AAAAFV
Trigger: GACAAATGCAGCAGCTGCCAAGGGTCTGCGTAACCC...CGCGCCGGCTCCTCTTTGCAGGGACTCCGAGACGCGCCTTAATTCATCTCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556418.1
3UTR GCA 72 bp TCCTGCACCAGGCTGCCAAAGTACGAGCCCTTGTCCTaGGCCAGCTCCACCACCTTCTTGTACAGCTTGCGG +
Preference number: 3 (lower is better)
Translates to: SCTRLPKYEPLS*ASSTTFLYSLR
Trigger: CCGCAAGCTGTACAAGAAGGTGGTGGAGCTGGCGCAGGACAAGGGCTCGTACTTTGGCAGCCTGGTGCAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555589.5
3UTR GCA 72 bp GGGTCATCATGGTGCGAATCTCCTGCAGCATCTCCGTaGTGGAGGTCTGGCGCGCCATCATCTCCAGGCTGT +
Preference number: 3 (lower is better)
Translates to: GSSWCESPAASP*WRSGAPSSPGC
Trigger: ACAGCCTGGAGATGATGGCGCGCCAGACCTCCAGCACGGAGATGCTGCAGGAGATTCGCACCATGATGACCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555589.5
3UTR GCA 72 bp GGCTTGGCGCCCCTGAGGCATGTGAACCATGGGCTGTaGCCTCCCAGAGGTGACAGCTTCATATGCAGAGGA +
Preference number: 3 (lower is better)
Translates to: GLAPLRHVNHGL*PPRGDSFICRG
Trigger: TCCTCTGCATATGAAGCTGTCACCTCTGGGAGGGCACAGCCCATGGTTCACATGCCTCAGGGGCGCCAAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556418.1
3UTR GCA 72 bp GAGTCCCTGCAAAGAGGAGCCGGCGCGTCCCCTGGCTaGTGGTCCACAGGCTCCCCATCATTCATTCATTCA +
Preference number: 3 (lower is better)
Translates to: ESLQRGAGASPG*WSTGSPSFIHS
Trigger: TGAATGAATGAATGATGGGGAGCCTGTGGACCAGCAGCCAGGGGACGCGCCGGCTCCTCTTTGCAGGGACTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556418.1
3UTR CCA 72 bp TCCCCACACGATGGCTCCTGCAATCTGCCACAGCTCTaGGGCGTGTCCTGTAGGGAAAGGCCCTGTTTTCCC +
Preference number: 3 (lower is better)
Translates to: SPHDGSCNLPQL*GVSCRERPCFP
Trigger: GGGAAAACAGGGCCTTTCCCTACAGGACACGCCCCAGAGCTGTGGCAGATTGCAGGAGCCATCGTGTGGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
3UTR CCA 72 bp GCACCTCCGGCACGCTGGTGGTCACACCTAGGTCAGTaGTGGTGGTGGCCAGGATCACTAACTGGTTCTCCT +
Preference number: 3 (lower is better)
Translates to: APPARWWSHLGQ*WWWPGSLTGSP
Trigger: AGGAGAACCAGTTAGTGATCCTGGCCACCACCACCACTGACCTAGGTGTGACCACCAGCGTGCCGGAGGTGC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555589.5
3UTR-3UTR CAA 90 bp ATTTCCAAGAGGTGGCTGGTCGGTGGGCAGGGCGCTGCTGCAGTCCTCGATGAATTTCACAGGCACAGTTaGCGTCATGGGCTGTGGGCC +
Preference number: 3 (lower is better)
Translates to: ISKRWLVGGQGAAAVLDEFHRHS*RHGLWA
Trigger: GGCCCACAGCCCATGACGCAAACTGTGCCTGTGAAA...TTCATCGAGGACTGCAGCAGCGCCCTGCCCACCGACCAGCCACCTCTTGGAAAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555589.5
3UTR TCA 72 bp GTGAAGAAGGGGAGATTGACCAGTGAGGGCAGCGGTTaGGCAGCCAGTGAACTGGGCTGGGCATGTTTGGGG +
Preference number: 3 (lower is better)
Translates to: VKKGRLTSEGSG*AASELGWACLG
Trigger: CCCCAAACATGCCCAGCCCAGTTCACTGGCTGCTCAACCGCTGCCCTCACTGGTCAATCTCCCCTTCTTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556418.1
3UTR-3UTR CAA 90 bp GCTCCACCACCTTCTTGTACAGCTTGCGGTTGTTGGAGAGGAAAGCGTGGAACACTGAGAAGCAGGGCTTaGGCCCTCTCTGGGTGGACC +
Preference number: 3 (lower is better)
Translates to: APPPSCTACGCWRGKRGTLRSRA*ALSGWT
Trigger: GGTCCACCCAGAGAGGGCCAAAGCCCTGCTTCTCAG...TGTTCCACGCTTTCCTCTCCAACAACCGCAAGCTGTACAAGAAGGTGGTGGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555589.5
3UTR GCA 72 bp TGGAACATGCTGCTGAAACTGGCAAAGCTCAGCCGGTaGCGAGCCTTGCCCAGGATCATGGAGGGCTTCTTC +
Preference number: 3 (lower is better)
Translates to: WNMLLKLAKLSR*RALPRIMEGFF
Trigger: GAAGAAGCCCTCCATGATCCTGGGCAAGGCTCGGCACCGGCTGAGCTTTGCCAGTTTCAGCAGCATGTTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555589.5
3UTR GCA 72 bp GGGTTGGTGGGGGTTACGCAGACCCTTGGCAGCTGCTaGATTTGTCCAGGGACTAAGGAGCAAGGCTGTAGA +
Preference number: 3 (lower is better)
Translates to: GLVGVTQTLGSC*ICPGTKEQGCR
Trigger: TCTACAGCCTTGCTCCTTAGTCCCTGGACAAATGCAGCAGCTGCCAAGGGTCTGCGTAACCCCCACCAACCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000556418.1
3UTR GCA 72 bp ACTGGGTTGGTGGGGGTTACGCAGACCCTTGGCAGCTaGTGCATTTGTCCAGGGACTAAGGAGCAAGGCTGT +
Preference number: 3 (lower is better)
Translates to: TGLVGVTQTLGS*CICPGTKEQGC
Trigger: ACAGCCTTGCTCCTTAGTCCCTGGACAAATGCAGCAGCTGCCAAGGGTCTGCGTAACCCCCACCAACCCAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000556418.1
3UTR CCA 72 bp TCATCATGGTGCGAATCTCCTGCAGCATCTCCGTGCTaGAGGTCTGGCGCGCCATCATCTCCAGGCTGTACA +
Preference number: 3 (lower is better)
Translates to: SSWCESPAASPC*RSGAPSSPGCT
Trigger: TGTACAGCCTGGAGATGATGGCGCGCCAGACCTCCAGCACGGAGATGCTGCAGGAGATTCGCACCATGATGA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555589.5
3UTR-3UTR CAA 90 bp CCTCCCTGGATGGATAGCGGGTGGCGGGCGCCAAGCTGTCTGCGAGTCCGGCACGAGTCAGTTATTAAATaGATTAGCCATAGTCAGCCT +
Preference number: 3 (lower is better)
Translates to: PPWMDSGWRAPSCLRVRHESVIK*ISHSQP
Trigger: AGGCTGACTATGGCTAATCAATTTAATAACTGACTC...GTGCCGGACTCGCAGACAGCTTGGCGCCCGCCACCCGCTATCCATCCAGGGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556418.1
3UTR GCA 72 bp TCAGGAACCCCTAAGGTAGAAGCAGGAAGTACGGGATaGCTGGGCCAGGCTTGGACCAAGAGTGTCCATGTC +
Preference number: 3 (lower is better)
Translates to: SGTPKVEAGSTG*LGQAWTKSVHV
Trigger: GACATGGACACTCTTGGTCCAAGCCTGGCCCAGGCATCCCGTACTTCCTGCTTCTACCTTAGGGGTTCCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556418.1
3UTR CCA 72 bp CCTAGGTCAGTGGTGGTGGTGGCCAGGATCACTAACTaGTTCTCCTTGAGCTGCTGCAGCGAACCATCCTTG +
Preference number: 3 (lower is better)
Translates to: PRSVVVVARITN*FSLSCCSEPSL
Trigger: CAAGGATGGTTCGCTGCAGCAGCTCAAGGAGAACCAGTTAGTGATCCTGGCCACCACCACCACTGACCTAGG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555589.5
3UTR-3UTR CAA 90 bp TCAGTGGTGGTGGTGGCCAGGATCACTAACTGGTTCTCCTTGAGCTGCTGCAGCTACAGCTTGCGGTTGTaGGAGAGGAAAGCGTGGAAC +
Preference number: 3 (lower is better)
Translates to: SVVVVARITNWFSLSCCSYSLRL*ERKAWN
Trigger: GTTCCACGCTTTCCTCTCCAACAACCGCAAGCTGTA...GCTGCAGCAGCTCAAGGAGAACCAGTTAGTGATCCTGGCCACCACCACCACTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555589.5
3UTR TCA 72 bp TTGAGCTGCTGCAGCGAACCATCCTTGCTGTGGATCTaGTGCAGGCATGAGTTGATGGCTTCCTTCAGGGGC +
Preference number: 3 (lower is better)
Translates to: LSCCSEPSLLWI*CRHELMASFRG
Trigger: GCCCCTGAAGGAAGCCATCAACTCATGCCTGCATCAGATCCACAGCAAGGATGGTTCGCTGCAGCAGCTCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555589.5
3UTR TCA 72 bp TGGTGGTGGTGGCCAGGATCACTAACTGGTTCTCCTTaGGCTGCTGCAGCGAACCATCCTTGCTGTGGATCT +
Preference number: 3 (lower is better)
Translates to: WWWWPGSLTGSP*AAAANHPCCGS
Trigger: AGATCCACAGCAAGGATGGTTCGCTGCAGCAGCTCAAGGAGAACCAGTTAGTGATCCTGGCCACCACCACCA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555589.5
3UTR GCA 72 bp CCTTGGACGAGCGTCATGTTATTTTCACAACTGTCCTaGGACGTTGGCCTGGGCACGTCATGGAATGGCCCA +
Preference number: 3 (lower is better)
Translates to: PWTSVMLFSQLS*DVGLGTSWNGP
Trigger: TGGGCCATTCCATGACGTGCCCAGGCCAACGTCGCAGGACAGTTGTGAAAATAACATGACGCTCGTCCAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
3UTR GCA 72 bp AACATGCCGTCTCGGTGTCTCAGGGCTATTAGGACTTaGCCTCAGGAAGTGGCCTTGGACGAGCGTCATGTT +
Preference number: 3 (lower is better)
Translates to: NMPSRCLRAIRT*PQEVALDERHV
Trigger: AACATGACGCTCGTCCAAGGCCACTTCCTGAGGGCAAGTCCTAATAGCCCTGAGACACCGAGACGGCATGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
3UTR CCA 72 bp GAGCGTCATGTTATTTTCACAACTGTCCTGCGACGTTaGCCTGGGCACGTCATGGAATGGCCCATGTCCCTC +
Preference number: 3 (lower is better)
Translates to: ERHVIFTTVLRR*PGHVMEWPMSL
Trigger: GAGGGACATGGGCCATTCCATGACGTGCCCAGGCCAACGTCGCAGGACAGTTGTGAAAATAACATGACGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
3UTR TCA 72 bp CCTTCCTGCTTGCCCAGGGAGAACACCAATGCCTGCTaGTATGTTTCTAGACGCACCCAAGTCCTGGACACA +
Preference number: 3 (lower is better)
Translates to: PSCLPRENTNAC*YVSRRTQVLDT
Trigger: TGTGTCCAGGACTTGGGTGCGTCTAGAAACATATCAGCAGGCATTGGTGTTCTCCCTGGGCAAGCAGGAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556418.1
3UTR GCA 72 bp TTATTAAATTCTCCCCACACGATGGCTCCTGCAATCTaGCACAGCTCTGGGGCGTGTCCTGTAGGGAAAGGC +
Preference number: 3 (lower is better)
Translates to: LLNSPHTMAPAI*HSSGACPVGKG
Trigger: GCCTTTCCCTACAGGACACGCCCCAGAGCTGTGGCAGATTGCAGGAGCCATCGTGTGGGGAGAATTTAATAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
3UTR GCA 72 bp TCCTGTCTCCCAGGCCTGGGCTCTGCTTATTATAGATaGACCATCTTGAAAGCCAGGAGTGTGGCTCAGGAC +
Preference number: 3 (lower is better)
Translates to: SCLPGLGSAYYR*TILKARSVAQD
Trigger: GTCCTGAGCCACACTCCTGGCTTTCAAGATGGTGCATCTATAATAAGCAGAGCCCAGGCCTGGGAGACAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556418.1
3UTR CCA 72 bp TCATGTTATTTTCACAACTGTCCTGCGACGTTGGCCTaGGCACGTCATGGAATGGCCCATGTCCCTCTGCTG +
Preference number: 3 (lower is better)
Translates to: SCYFHNCPATLA*ARHGMAHVPLL
Trigger: CAGCAGAGGGACATGGGCCATTCCATGACGTGCCCAGGCCAACGTCGCAGGACAGTTGTGAAAATAACATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
3UTR TCA 72 bp GCAGGTCTTGAGCAGGATGGAGATCTTCTTCTCAGGTaGGTAGGCCTTGTGCATGCTGGTGAACTTCTGCAG +
Preference number: 3 (lower is better)
Translates to: AGLEQDGDLLLR*VGLVHAGELLQ
Trigger: CTGCAGAAGTTCACCAGCATGCACAAGGCCTACTCACCTGAGAAGAAGATCTCCATCCTGCTCAAGACCTGC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555589.5
3UTR TCA 72 bp GAGGCATGTGAACCATGGGCTGTGCCCTCCCAGAGGTaGCAGCTTCATATGCAGAGGATGATAGGATGTGAT +
Preference number: 3 (lower is better)
Translates to: EACEPWAVPSQR*QLHMQRMIGCD
Trigger: ATCACATCCTATCATCCTCTGCATATGAAGCTGTCACCTCTGGGAGGGCACAGCCCATGGTTCACATGCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556418.1
3UTR CCA 72 bp TTCTTGTACAGCTTGCGGTTGTTGGAGAGGAAAGCGTaGAACATGCTGCTGAAACTGGCAAAGCTCAGCCGG +
Preference number: 3 (lower is better)
Translates to: FLYSLRLLERKA*NMLLKLAKLSR
Trigger: CCGGCTGAGCTTTGCCAGTTTCAGCAGCATGTTCCACGCTTTCCTCTCCAACAACCGCAAGCTGTACAAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555589.5
3UTR CCA 72 bp GAGGGGCTGTTGGAGAAACTGAGTCGTCTTAAAGGATaGGCAGTGACAGCCAGTGAAGAAGGGGAGATTGAC +
Preference number: 3 (lower is better)
Translates to: EGLLEKLSRLKG*AVTASEEGEID
Trigger: GTCAATCTCCCCTTCTTCACTGGCTGTCACTGCCCATCCTTTAAGACGACTCAGTTTCTCCAACAGCCCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556418.1
3UTR CCA 72 bp TCAGGGCTATTAGGACTTGCCCTCAGGAAGTGGCCTTaGACGAGCGTCATGTTATTTTCACAACTGTCCTGC +
Preference number: 3 (lower is better)
Translates to: SGLLGLALRKWP*TSVMLFSQLSC
Trigger: GCAGGACAGTTGTGAAAATAACATGACGCTCGTCCAAGGCCACTTCCTGAGGGCAAGTCCTAATAGCCCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
3UTR CCA 72 bp GGTGTCTCAGGGCTATTAGGACTTGCCCTCAGGAAGTaGCCTTGGACGAGCGTCATGTTATTTTCACAACTG +
Preference number: 3 (lower is better)
Translates to: GVSGLLGLALRK*PWTSVMLFSQL
Trigger: CAGTTGTGAAAATAACATGACGCTCGTCCAAGGCCACTTCCTGAGGGCAAGTCCTAATAGCCCTGAGACACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
3UTR TCA 72 bp CACTTCTTTCCAACTCCACATTCAGTGATGCCAAGTTaGAGTTGGCCATGGAGGACTCACACCATGGAAATG +
Preference number: 3 (lower is better)
Translates to: HFFPTPHSVMPS*SWPWRTHTMEM
Trigger: CATTTCCATGGTGTGAGTCCTCCATGGCCAACTTCAACTTGGCATCACTGAATGTGGAGTTGGAAAGAAGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556418.1
CDS-3UTR TCA 90 bp GCGAGGCGACGCCTGCGGGCTGGGGCTGGGCACTCGCAGCACGAGCAGGGCGCCAGGCCCGGGCCTTGTTaGGAGTACGCCGGCGCTCCC +
Preference number: 4 (lower is better)
Translates to: ARRRLRAGAGHSQHEQGARPGPC*EYAGAP
Trigger: GGGAGCGCCGGCGTACTCTCAACAAGGCCCGGGCCT...GGCGCCCTGCTCGTGCTGCGAGTGCCCAGCCCCAGCCCGCAGGCGTCGCCTCGC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556418.1
CDS-3UTR GCA 90 bp GCGAGGCGACGCCTGCGGGCTGGGGCTGGGCACTCGCAGCACGAGCAGGGCGCCAGCGTCCGCGCCTGCTaGTCGGGCTCCAGGTACGAC +
Preference number: 4 (lower is better)
Translates to: ARRRLRAGAGHSQHEQGASVRAC*SGSRYD
Trigger: GTCGTACCTGGAGCCCGAGCAGCAGGCGCGGACGCT...GGCGCCCTGCTCGTGCTGCGAGTGCCCAGCCCCAGCCCGCAGGCGTCGCCTCGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556418.1
CDS-3UTR GCA 90 bp CCCTCTGCTGCGTGGACGTCGCGGTCGGGAGTGCGCAGCCAGAGGCGGGGCCAGTGCCGGGCACAGAGCTaGGGGGTCTGGGGGCACCGG +
Preference number: 4 (lower is better)
Translates to: PSAAWTSRSGVRSQRRGQCRAQS*GVWGHR
Trigger: CCGGTGCCCCCAGACCCCGCAGCTCTGTGCCCGGCA...CTGGCCCCGCCTCTGGCTGCGCACTCCCGACCGCGACGTCCACGCAGCAGAGGG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR CCA 90 bp CGAGGCGACGCCTGCGGGCTGGGGCTGGGCACTCGCAGCACGAGCAGGGCGCCCTGGGTGGACCCGGCGTaGGTGTCTCCAAGGCCATCG +
Preference number: 4 (lower is better)
Translates to: RGDACGLGLGTRSTSRAPWVDPA*VSPRPS
Trigger: CGATGGCCTTGGAGACACCCACGCCGGGTCCACCCA...GGGCGCCCTGCTCGTGCTGCGAGTGCCCAGCCCCAGCCCGCAGGCGTCGCCTCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556418.1
CDS-3UTR CCA 90 bp GCGAGGCGACGCCTGCGGGCTGGGGCTGGGCACTCGCAGCACGAGCAGGGCGCCGCAGCATCTCCGTGCTaGAGGTCTGGCGCGCCATCA +
Preference number: 4 (lower is better)
Translates to: ARRRLRAGAGHSQHEQGAAASPC*RSGAPS
Trigger: TGATGGCGCGCCAGACCTCCAGCACGGAGATGCTGC...GGCGCCCTGCTCGTGCTGCGAGTGCCCAGCCCCAGCCCGCAGGCGTCGCCTCGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556418.1
CDS-3UTR CCA 90 bp GCGAGGCGACGCCTGCGGGCTGGGGCTGGGCACTCGCAGCACGAGCAGGGCGCCCCTCCGGCACGCTGGTaGTCACACCTAGGTCAGTGG +
Preference number: 4 (lower is better)
Translates to: ARRRLRAGAGHSQHEQGAPPARW*SHLGQW
Trigger: CCACTGACCTAGGTGTGACCACCAGCGTGCCGGAGG...GGCGCCCTGCTCGTGCTGCGAGTGCCCAGCCCCAGCCCGCAGGCGTCGCCTCGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556418.1
CDS-3UTR GCA 90 bp CCCTCTGCTGCGTGGACGTCGCGGTCGGGAGTGCGCAGCCAGAGGCGGGGCCAGGAGCTGGTCCCCCTCTaGCGCCATCCCCGGACTTTG +
Preference number: 4 (lower is better)
Translates to: PSAAWTSRSGVRSQRRGQELVPL*RHPRTL
Trigger: CAAAGTCCGGGGATGGCGGCAGAGGGGGACCAGCTC...CTGGCCCCGCCTCTGGCTGCGCACTCCCGACCGCGACGTCCACGCAGCAGAGGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR GCA 90 bp TGCCGGGCACAGAGCTGCGGGGTCTGGGGGCACCGGGAGCTAAGAGCAGGCTCTCCGCGGAGCTGGCCGTaGTTGGCGCCCTGGCGTGTG +
Preference number: 4 (lower is better)
Translates to: CRAQSCGVWGHRELRAGSPRSWP*LAPWRV
Trigger: CACACGCCAGGGCGCCAAGCACGGCCAGCTCCGCGG...AGAGCCTGCTCTTAGCTCCCGGTGCCCCCAGACCCCGCAGCTCTGTGCCCGGCA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR GCA 90 bp GCGAGGCGACGCCTGCGGGCTGGGGCTGGGCACTCGCAGCACGAGCAGGGCGCCTTACACACCCAGTCCTaGTCTGTCCCAGGCCCTGGG +
Preference number: 4 (lower is better)
Translates to: ARRRLRAGAGHSQHEQGALHTQS*SVPGPG
Trigger: CCCAGGGCCTGGGACAGAGCAGGACTGGGTGTGTAA...GGCGCCCTGCTCGTGCTGCGAGTGCCCAGCCCCAGCCCGCAGGCGTCGCCTCGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556418.1
CDS-3UTR CCA 90 bp CCTCCCTGGATGGATAGCGGGTGGCGGGCGCCAAGCTGTCTGCGAGTCCGGCACTGGGCGAGCAGGCGCTaGAAGCTCCGGCCCGGAGCG +
Preference number: 4 (lower is better)
Translates to: PPWMDSGWRAPSCLRVRHWASRR*KLRPGA
Trigger: CGCTCCGGGCCGGAGCTTCCAGCGCCTGCTCGCCCA...GTGCCGGACTCGCAGACAGCTTGGCGCCCGCCACCCGCTATCCATCCAGGGAGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556418.1
CDS-3UTR CCA 90 bp CTGCGGAGACGCGAGGGGCCTGTGGTCACGGCGGGGCCCTGTCTCCTCAGGCGCGGGCTGCAAGAGCCCTaGGGCTCTGAGGAGCTGCGT +
Preference number: 4 (lower is better)
Translates to: LRRREGPVVTAGPCLLRRGLQEP*GSEELR
Trigger: ACGCAGCTCCTCAGAGCCCCAGGGCTCTTGCAGCCC...GCGCCTGAGGAGACAGGGCCCCGCCGTGACCACAGGCCCCTCGCGTCTCCGCAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556418.1
CDS-3UTR TCA 90 bp CGAGGCGACGCCTGCGGGCTGGGGCTGGGCACTCGCAGCACGAGCAGGGCGCCCCGGTTGAGCAGCCAGTaGACTGGGCTGGGCATGTTT +
Preference number: 4 (lower is better)
Translates to: RGDACGLGLGTRSTSRAPRLSSQ*TGLGMF
Trigger: AAACATGCCCAGCCCAGTTCACTGGCTGCTCAACCG...GGGCGCCCTGCTCGTGCTGCGAGTGCCCAGCCCCAGCCCGCAGGCGTCGCCTCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556418.1
CDS-3UTR GCA 90 bp GTCCGCGGAGCTGGCCGTGCTTGGCGCCCTGGCGTGTGTCTAGCTGCTTCTTGCTGCCGGGCACAGAGCTaGGGGGTCTGGGGGCACCGG +
Preference number: 4 (lower is better)
Translates to: VRGAGRAWRPGVCLAASCCRAQS*GVWGHR
Trigger: CCGGTGCCCCCAGACCCCGCAGCTCTGTGCCCGGCA...GCAAGAAGCAGCTAGACACACGCCAGGGCGCCAAGCACGGCCAGCTCCGCGGAC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR GCA 90 bp GATAGCGGGTGGCGGGCGCCAAGCTGTCTGCGAGTCCGGCACCTGCGCCTTTCCGGGCGCCAAGCTGTCTaGGAGTCCGGCACCTGCGCC +
Preference number: 4 (lower is better)
Translates to: DSGWRAPSCLRVRHLRLSGRQAV*ESGTCA
Trigger: GGCGCAGGTGCCGGACTCGCAGACAGCTTGGCGCCC...GGAAAGGCGCAGGTGCCGGACTCGCAGACAGCTTGGCGCCCGCCACCCGCTATC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556418.1
CDS-3UTR CCA 90 bp CCCTCTGCTGCGTGGACGTCGCGGTCGGGAGTGCGCAGCCAGAGGCGGGGCCAGAGTGGAAGTCGCGCTTaGGCTCGCTGCGCAGCAGGT +
Preference number: 4 (lower is better)
Translates to: PSAAWTSRSGVRSQRRGQSGSRA*ARCAAG
Trigger: ACCTGCTGCGCAGCGAGCCCAAGCGCGACTTCCACT...CTGGCCCCGCCTCTGGCTGCGCACTCCCGACCGCGACGTCCACGCAGCAGAGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR CCA 90 bp GCGAGGCGACGCCTGCGGGCTGGGGCTGGGCACTCGCAGCACGAGCAGGGCGCCGCCAGTGAACTGGGCTaGGCATGTTTGGGGAACTGG +
Preference number: 4 (lower is better)
Translates to: ARRRLRAGAGHSQHEQGAASELG*ACLGNW
Trigger: CCAGTTCCCCAAACATGCCCAGCCCAGTTCACTGGC...GGCGCCCTGCTCGTGCTGCGAGTGCCCAGCCCCAGCCCGCAGGCGTCGCCTCGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556418.1
CDS-3UTR CCA 90 bp AAGGGAGGTGCGAGCCCGCCCGGGCATCCCATAGTGCGGGCGGGCAACACAGTCAGCCGGCGCGTCCCCTaGCTGCTGGTCCACAGGCTC +
Preference number: 4 (lower is better)
Translates to: KGGASPPGHPIVRAGNTVSRRVP*LLVHRL
Trigger: GAGCCTGTGGACCAGCAGCCAGGGGACGCGCCGGCT...GACTGTGTTGCCCGCCCGCACTATGGGATGCCCGGGCGGGCTCGCACCTCCCTT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556418.1
CDS-3UTR CCA 90 bp GGGCCCTTCCTCTGGTGTGGGGAGTCTCACTGCTCCCCTAAGGCAGGGCTGGGCGACGCGAGGGGCCTGTaGTCACGGCGGGGCCCTGTC +
Preference number: 4 (lower is better)
Translates to: GPFLWCGESHCSPKAGLGDARGL*SRRGPV
Trigger: GACAGGGCCCCGCCGTGACCACAGGCCCCTCGCGTC...GCCCAGCCCTGCCTTAGGGGAGCAGTGAGACTCCCCACACCAGAGGAAGGGCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000556418.1
3UTR CAA 72 bp CCGTGCTTGGCGCCCTGGCGTGTGTCTAGCTGCTTCTaGCCGGGCACAGAGCTGCGGGGTCTGGGGGCACCG +
Preference number: 4 (lower is better)
Translates to: PCLAPWRVSSCF*PGTELRGLGAP
Trigger: CGGTGCCCCCAGACCCCGCAGCTCTGTGCCCGGCAAGAAGCAGCTAGACACACGCCAGGGCGCCAAGCACGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR TCA 90 bp CCCTCTGCTGCGTGGACGTCGCGGTCGGGAGTGCGCAGCCAGAGGCGGGGCCAGGCAGGGCGGGGTCCATaGGCTCCATCATGTACTCCA +
Preference number: 4 (lower is better)
Translates to: PSAAWTSRSGVRSQRRGQAGRGP*APSCTP
Trigger: TGGAGTACATGATGGAGCTCATGGACCCCGCCCTGC...CTGGCCCCGCCTCTGGCTGCGCACTCCCGACCGCGACGTCCACGCAGCAGAGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR TCA 90 bp AGCTGCTTCTTGCCGGGCACAGAGCTGCGGGGTCTGGGGGCACCGGGAGCTAAGAGGCCCGGGCCTTGTTaGGAGTACGCCGGCGCTCCC +
Preference number: 4 (lower is better)
Translates to: SCFLPGTELRGLGAPGAKRPGPC*EYAGAP
Trigger: GGGAGCGCCGGCGTACTCTCAACAAGGCCCGGGCCT...CTTAGCTCCCGGTGCCCCCAGACCCCGCAGCTCTGTGCCCGGCAAGAAGCAGCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR TCA 90 bp TGGGAGGGGATGGGAACAGAGGTGTGCTGGAGCTGGCTCACACCCGCCAGGGAGTGCGCGGGAAGCGGCTaGGGATCCCGGCTCGGCGGA +
Preference number: 4 (lower is better)
Translates to: WEGMGTEVCWSWLTPARECAGSG*GSRLGG
Trigger: TCCGCCGAGCCGGGATCCTCAGCCGCTTCCCGCGCA...CTCCCTGGCGGGTGTGAGCCAGCTCCAGCACACCTCTGTTCCCATCCCCTCCCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556418.1
CDS-3UTR GCA 90 bp CTGTGTCCTGGCCTTGCTCCGTGCTCTCCCGGGGCGTGTCCTCAGGGCCGTCTGGAGGGGGCCCAGGCCTaGAGTGGGGCATGGGAGTCT +
Preference number: 4 (lower is better)
Translates to: LCPGLAPCSPGACPQGRLEGAQA*SGAWES
Trigger: AGACTCCCATGCCCCACTGCAGGCCTGGGCCCCCTC...CAGACGGCCCTGAGGACACGCCCCGGGAGAGCACGGAGCAAGGCCAGGACACAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000555589.5
CDS-3UTR GCA 90 bp CCCTCTGCTGCGTGGACGTCGCGGTCGGGAGTGCGCAGCCAGAGGCGGGGCCAGCAAGGGACTGGAGGCTaGCCCTGGCTTCATCGCTTC +
Preference number: 4 (lower is better)
Translates to: PSAAWTSRSGVRSQRRGQQGTGG*PWLHRF
Trigger: GAAGCGATGAAGCCAGGGGCAGCCTCCAGTCCCTTG...CTGGCCCCGCCTCTGGCTGCGCACTCCCGACCGCGACGTCCACGCAGCAGAGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216487.12
CDS-3UTR GCA 90 bp AGTGGCACGGGGAGCAGCTGTGGCCGGTGCTCCTTCCTAGGCCAGTCCTGGGGAGGCGGGGCGGGGACCTaGTGCAAGGGACTGGAGGCT +
Preference number: 4 (lower is better)
Translates to: SGTGSSCGRCSFLGQSWGGGAGT*CKGLEA
Trigger: AGCCTCCAGTCCCTTGCAGCAGGTCCCCGCCCCGCC...TCCCCAGGACTGGCCTAGGAAGGAGCACCGGCCACAGCTGCTCCCCGTGCCACT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000216487.12
CDS-3UTR GCA 90 bp TGCCGGGCACAGAGCTGCGGGGTCTGGGGGCACCGGGAGCTAAGAGCAGGCTCTCCTGGCCTTGCTCCGTaGTCTCCCGGGGCGTGTCCT +
Preference number: 4 (lower is better)
Translates to: CRAQSCGVWGHRELRAGSPGLAP*SPGACP
Trigger: AGGACACGCCCCGGGAGAGCACGGAGCAAGGCCAGG...AGAGCCTGCTCTTAGCTCCCGGTGCCCCCAGACCCCGCAGCTCTGTGCCCGGCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR GCA 90 bp GCGAGGCGACGCCTGCGGGCTGGGGCTGGGCACTCGCAGCACGAGCAGGGCGCCATGGTGCGAATCTCCTaGAGCATCTCCGTGCTGGAG +
Preference number: 4 (lower is better)
Translates to: ARRRLRAGAGHSQHEQGAMVRIS*SISVLE
Trigger: CTCCAGCACGGAGATGCTGCAGGAGATTCGCACCAT...GGCGCCCTGCTCGTGCTGCGAGTGCCCAGCCCCAGCCCGCAGGCGTCGCCTCGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556418.1
CDS-3UTR GCA 90 bp CTGTGTCCTGGCCTTGCTCCGTGCTCTCCCGGGGCGTGTCCTCAGGGCCGTCTGAGCTCCTCCTCGGAGTaGAGGGCGGGGTCCACCAGG +
Preference number: 4 (lower is better)
Translates to: LCPGLAPCSPGACPQGRLSSSSE*RAGSTR
Trigger: CCTGGTGGACCCCGCCCTGCACTCCGAGGAGGAGCT...CAGACGGCCCTGAGGACACGCCCCGGGAGAGCACGGAGCAAGGCCAGGACACAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555589.5
CDS-3UTR GCA 90 bp GTCCTGTACGGAGGAGCGGGAGGCCCGGGCCTTGTTGAGAGTACGCCGGCGCTCAGCGTCCGCGCCTGCTaGTCGGGCTCCAGGTACGAC +
Preference number: 4 (lower is better)
Translates to: VLYGGAGGPGLVESTPALSVRAC*SGSRYD
Trigger: GTCGTACCTGGAGCCCGAGCAGCAGGCGCGGACGCT...GAGCGCCGGCGTACTCTCAACAAGGCCCGGGCCTCCCGCTCCTCCGTACAGGAC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555589.5
CDS-3UTR GCA 90 bp GATAGCGGGTGGCGGGCGCCAAGCTGTCTGCGAGTCCGGCACCTGCGCCTTTCCAACTTCTCCGCGCACTaGGCGCACAGCGCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: DSGWRAPSCLRVRHLRLSNFSAH*AHSAWA
Trigger: GGCCCAGGCGCTGTGCGCGCAGTGCGCGGAGAAGTT...GGAAAGGCGCAGGTGCCGGACTCGCAGACAGCTTGGCGCCCGCCACCCGCTATC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556418.1
CDS-3UTR GCA 90 bp GTCCGCGGAGCTGGCCGTGCTTGGCGCCCTGGCGTGTGTCTAGCTGCTTCTTGCAGCACGAACAGCCGGTaGGCCTGCGGCCGCTCCACC +
Preference number: 4 (lower is better)
Translates to: VRGAGRAWRPGVCLAASCSTNSR*ACGRST
Trigger: GGTGGAGCGGCCGCAGGCGCACCGGCTGTTCGTGCT...GCAAGAAGCAGCTAGACACACGCCAGGGCGCCAAGCACGGCCAGCTCCGCGGAC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR GCA 90 bp AAGGGAGGTGCGAGCCCGCCCGGGCATCCCATAGTGCGGGCGGGCAACACAGTCGCACCCCAGGCGCAATaGTGGGCACGGAGGGCAGCA +
Preference number: 4 (lower is better)
Translates to: KGGASPPGHPIVRAGNTVAPQAQ*WARRAA
Trigger: TGCTGCCCTCCGTGCCCAGCATTGCGCCTGGGGTGC...GACTGTGTTGCCCGCCCGCACTATGGGATGCCCGGGCGGGCTCGCACCTCCCTT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556418.1
CDS-3UTR CCA 90 bp TGCCGGGCACAGAGCTGCGGGGTCTGGGGGCACCGGGAGCTAAGAGCAGGCTCTGGCGTGGGGCCCACCTaGAGGTGGGTGAGGTGGCAT +
Preference number: 4 (lower is better)
Translates to: CRAQSCGVWGHRELRAGSGVGPT*RWVRWH
Trigger: ATGCCACCTCACCCACCTCCAGGTGGGCCCCACGCC...AGAGCCTGCTCTTAGCTCCCGGTGCCCCCAGACCCCGCAGCTCTGTGCCCGGCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR CCA 90 bp GTCCTGTACGGAGGAGCGGGAGGCCCGGGCCTTGTTGAGAGTACGCCGGCGCTCGGCGGCTGGTTCGGATaGTCTGGGGGACCTGGGGCA +
Preference number: 4 (lower is better)
Translates to: VLYGGAGGPGLVESTPALGGWFG*SGGPGA
Trigger: TGCCCCAGGTCCCCCAGACCATCCGAACCAGCCGCC...GAGCGCCGGCGTACTCTCAACAAGGCCCGGGCCTCCCGCTCCTCCGTACAGGAC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000555589.5
CDS-3UTR CCA 90 bp GTCCGCGGAGCTGGCCGTGCTTGGCGCCCTGGCGTGTGTCTAGCTGCTTCTTGCGCGTCGTCCGCCAGCTaGAAGCAGCGCCCGTCCACC +
Preference number: 4 (lower is better)
Translates to: VRGAGRAWRPGVCLAASCASSAS*KQRPST
Trigger: GGTGGACGGGCGCTGCTTCCAGCTGGCGGACGACGC...GCAAGAAGCAGCTAGACACACGCCAGGGCGCCAAGCACGGCCAGCTCCGCGGAC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR CCA 90 bp CCGGGCACAGAGCTGCGGGGTCTGGGGGCACCGGGAGCTAAGAGCAGGCTCTGGGGAGCTGGCCGTGCTTaGCGCCCTGGCGTGTGTCTA +
Preference number: 4 (lower is better)
Translates to: PGTELRGLGAPGAKSRLWGAGRA*RPGVCL
Trigger: TAGACACACGCCAGGGCGCCAAGCACGGCCAGCTCC...CCAGAGCCTGCTCTTAGCTCCCGGTGCCCCCAGACCCCGCAGCTCTGTGCCCGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR CCA 90 bp GGAGCTGGCCGTGCTTGGCGCCCTGGCGTGTGTCTAGCTGCTTCTTGCCGGGCAATGGGTCCGCGGAGCTaGCCGTGCTTGGCGCCCTGG +
Preference number: 4 (lower is better)
Translates to: GAGRAWRPGVCLAASCRAMGPRS*PCLAPW
Trigger: CCAGGGCGCCAAGCACGGCCAGCTCCGCGGACCCAT...TGCCCGGCAAGAAGCAGCTAGACACACGCCAGGGCGCCAAGCACGGCCAGCTCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR CCA 90 bp GCGAGGCGACGCCTGCGGGCTGGGGCTGGGCACTCGCAGCACGAGCAGGGCGCCCATCCATACTCTGCCTaGCTCAGCATCAGGAACCCC +
Preference number: 4 (lower is better)
Translates to: ARRRLRAGAGHSQHEQGAHPYSA*LSIRNP
Trigger: GGGGTTCCTGATGCTGAGCCAGGCAGAGTATGGATG...GGCGCCCTGCTCGTGCTGCGAGTGCCCAGCCCCAGCCCGCAGGCGTCGCCTCGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556418.1
CDS-3UTR CCA 90 bp TGGATAGCGGGTGGCGGGCGCCAAGCTGTCTGCGAGTCCGGCACCTGCGCCTTTCCTGCGGGCTGGGGCTaGGCACTCGCAGCACGAGCA +
Preference number: 4 (lower is better)
Translates to: WIAGGGRQAVCESGTCAFPAGWG*ALAARA
Trigger: TGCTCGTGCTGCGAGTGCCCAGCCCCAGCCCGCAGG...AAAGGCGCAGGTGCCGGACTCGCAGACAGCTTGGCGCCCGCCACCCGCTATCCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556418.1
CDS-3UTR CCA 90 bp TGGATAGCGGGTGGCGGGCGCCAAGCTGTCTGCGAGTCCGGCACCTGCGCCTTTCTGGGCGCAGTCGGGTaGGGAAGGCCCGGCATGAGC +
Preference number: 4 (lower is better)
Translates to: WIAGGGRQAVCESGTCAFLGAVG*GRPGMS
Trigger: GCTCATGCCGGGCCTTCCCCACCCGACTGCGCCCAG...AAAGGCGCAGGTGCCGGACTCGCAGACAGCTTGGCGCCCGCCACCCGCTATCCA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556418.1
CDS-3UTR CCA 90 bp TGGGTCCGCGGAGCTGGCCGTGCTTGGCGCCCTGGCGTGTGTCTAGCTGCTTCTCTTCTTCGCAGGCAGTaGCGGGGCGGGGACAGGGGG +
Preference number: 4 (lower is better)
Translates to: WVRGAGRAWRPGVCLAASLLRRQ*RGGDRG
Trigger: CCCCCTGTCCCCGCCCCGCCACTGCCTGCGAAGAAG...AGAAGCAGCTAGACACACGCCAGGGCGCCAAGCACGGCCAGCTCCGCGGACCCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000620541.4
CDS-3UTR TCA 90 bp AATGGCCCATGTCCCTCTGCTGCGTGGACGTCGCGGTCGGGAGTGCGCAGCCAGCACCCCCAAGCTGTCTaGGAGGGAGGCCAGGGAGCC +
Preference number: 4 (lower is better)
Translates to: NGPCPSAAWTSRSGVRSQHPQAV*EGGQGA
Trigger: GGCTCCCTGGCCTCCCTCTCAGACAGCTTGGGGGTG...CTGGCTGCGCACTCCCGACCGCGACGTCCACGCAGCAGAGGGACATGGGCCATT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR TCA 90 bp CGACACCCTGAGGTGCTCCTGAGATGCTGGGTCCACCCTGAGTGGCACGGGGAGAGGCCCGGGCCTTGTTaGGAGTACGCCGGCGCTCCC +
Preference number: 4 (lower is better)
Translates to: RHPEVLLRCWVHPEWHGERPGPC*EYAGAP
Trigger: GGGAGCGCCGGCGTACTCTCAACAAGGCCCGGGCCT...CTCCCCGTGCCACTCAGGGTGGACCCAGCATCTCAGGAGCACCTCAGGGTGTCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR TCA 90 bp GATAGCGGGTGGCGGGCGCCAAGCTGTCTGCGAGTCCGGCACCTGCGCCTTTCCGGGGGCAGCTGGATTTaGTGCAGCCTGGGGGTGGGT +
Preference number: 4 (lower is better)
Translates to: DSGWRAPSCLRVRHLRLSGGSWI*CSLGVG
Trigger: ACCCACCCCCAGGCTGCATCAAATCCAGCTGCCCCC...GGAAAGGCGCAGGTGCCGGACTCGCAGACAGCTTGGCGCCCGCCACCCGCTATC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000556418.1
CDS-3UTR GCA 90 bp AATGGCCCATGTCCCTCTGCTGCGTGGACGTCGCGGTCGGGAGTGCGCAGCCAGGAGGGGGCCCAGGCCTaGAGTGGGGCATGGGAGTCT +
Preference number: 4 (lower is better)
Translates to: NGPCPSAAWTSRSGVRSQEGAQA*SGAWES
Trigger: AGACTCCCATGCCCCACTGCAGGCCTGGGCCCCCTC...CTGGCTGCGCACTCCCGACCGCGACGTCCACGCAGCAGAGGGACATGGGCCATT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000216487.12
CDS-3UTR GCA 90 bp CTGCTCCAGCTCCTCCTCCGTGCTGCTGGTGGAGTAGGAGTCCTGGTCGGTGGCGGGGCGGGGACCTGCTaGAAGGGACTGGAGGCTGCC +
Preference number: 4 (lower is better)
Translates to: LLQLLLRAAGGVGVLVGGGAGTC*KGLEAA
Trigger: GGCAGCCTCCAGTCCCTTGCAGCAGGTCCCCGCCCC...GCCACCGACCAGGACTCCTACTCCACCAGCAGCACGGAGGAGGAGCTGGAGCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555589.5
CDS-3UTR GCA 90 bp GGTCCGCGGAGCTGGCCGTGCTTGGCGCCCTGGCGTGTGTCTAGCTGCTTCTTGCCTGGCCTTGCTCCGTaGTCTCCCGGGGCGTGTCCT +
Preference number: 4 (lower is better)
Translates to: GPRSWPCLAPWRVSSCFLPGLAP*SPGACP
Trigger: AGGACACGCCCCGGGAGAGCACGGAGCAAGGCCAGG...CAAGAAGCAGCTAGACACACGCCAGGGCGCCAAGCACGGCCAGCTCCGCGGACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR GCA 90 bp CCGGGCACAGAGCTGCGGGGTCTGGGGGCACCGGGAGCTAAGAGCAGGCTCTGGCTGGGGCTGCTGAACTaGTCCAGCTCCTCCTCCGTG +
Preference number: 4 (lower is better)
Translates to: PGTELRGLGAPGAKSRLWLGLLN*SSSSSV
Trigger: CACGGAGGAGGAGCTGGAGCAGTTCAGCAGCCCCAG...CCAGAGCCTGCTCTTAGCTCCCGGTGCCCCCAGACCCCGCAGCTCTGTGCCCGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR GCA 90 bp CTGTGTCCTGGCCTTGCTCCGTGCTCTCCCGGGGCGTGTCCTCAGGGCCGTCTGCCTGCAGCATCTCCGTaGTGGAGGTCTGGCGCGCCA +
Preference number: 4 (lower is better)
Translates to: LCPGLAPCSPGACPQGRLPAASP*WRSGAP
Trigger: TGGCGCGCCAGACCTCCAGCACGGAGATGCTGCAGG...CAGACGGCCCTGAGGACACGCCCCGGGAGAGCACGGAGCAAGGCCAGGACACAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555589.5
CDS-3UTR GCA 90 bp GGAGCTGGCCGTGCTTGGCGCCCTGGCGTGTGTCTAGCTGCTTCTTGCCGGGCAAGCTCCTCCTCGGAGTaGAGGGCGGGGTCCACCAGG +
Preference number: 4 (lower is better)
Translates to: GAGRAWRPGVCLAASCRASSSSE*RAGSTR
Trigger: CCTGGTGGACCCCGCCCTGCACTCCGAGGAGGAGCT...TGCCCGGCAAGAAGCAGCTAGACACACGCCAGGGCGCCAAGCACGGCCAGCTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR GCA 90 bp TGGGTCCGCGGAGCTGGCCGTGCTTGGCGCCCTGGCGTGTGTCTAGCTGCTTCTAGCGTCCGCGCCTGCTaGTCGGGCTCCAGGTACGAC +
Preference number: 4 (lower is better)
Translates to: WVRGAGRAWRPGVCLAASSVRAC*SGSRYD
Trigger: GTCGTACCTGGAGCCCGAGCAGCAGGCGCGGACGCT...AGAAGCAGCTAGACACACGCCAGGGCGCCAAGCACGGCCAGCTCCGCGGACCCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR GCA 90 bp TCGCAGGTCATCATGGGCGGCTGGTTCGGATGGTCTGGGGGACCTGGGGCATGGGCCAGCGTCCGCGCCTaGTGCTCGGGCTCCAGGTAC +
Preference number: 4 (lower is better)
Translates to: SQVIMGGWFGWSGGPGAWASVRA*CSGSRY
Trigger: GTACCTGGAGCCCGAGCAGCAGGCGCGGACGCTGGC...CCATGCCCCAGGTCCCCCAGACCATCCGAACCAGCCGCCCATGATGACCTGCGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000555589.5
CDS-3UTR GCA 90 bp CGACACCCTGAGGTGCTCCTGAGATGCTGGGTCCACCCTGAGTGGCACGGGGAGGCCAGCGTCCGCGCCTaGTGCTCGGGCTCCAGGTAC +
Preference number: 4 (lower is better)
Translates to: RHPEVLLRCWVHPEWHGEASVRA*CSGSRY
Trigger: GTACCTGGAGCCCGAGCAGCAGGCGCGGACGCTGGC...CTCCCCGTGCCACTCAGGGTGGACCCAGCATCTCAGGAGCACCTCAGGGTGTCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR GCA 90 bp TGTGAAGAGGGCGCCGGTTTGTTGGCTGCAGCGGCCTGGAGCGCCTCTCTCCTGAGCACGAACAGCCGGTaGGCCTGCGGCCGCTCCACC +
Preference number: 4 (lower is better)
Translates to: CEEGAGLLAAAAWSASLLSTNSR*ACGRST
Trigger: GGTGGAGCGGCCGCAGGCGCACCGGCTGTTCGTGCT...CAGGAGAGAGGCGCTCCAGGCCGCTGCAGCCAACAAACCGGCGCCCTCTTCACA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR GCA 90 bp GTCCGCGGAGCTGGCCGTGCTTGGCGCCCTGGCGTGTGTCTAGCTGCTTCTTGCCCCATGTCCCTCTGCTaGGTGGACGTCGCGGTCGGG +
Preference number: 4 (lower is better)
Translates to: VRGAGRAWRPGVCLAASCPMSLC*VDVAVG
Trigger: CCCGACCGCGACGTCCACGCAGCAGAGGGACATGGG...GCAAGAAGCAGCTAGACACACGCCAGGGCGCCAAGCACGGCCAGCTCCGCGGAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR GCA 90 bp GGAGCTGGCCGTGCTTGGCGCCCTGGCGTGTGTCTAGCTGCTTCTTGCCGGGCACGCCGGTTTGTTGGCTaGAGCGGCCTGGAGCGCCTC +
Preference number: 4 (lower is better)
Translates to: GAGRAWRPGVCLAASCRARRFVG*SGLERL
Trigger: GAGGCGCTCCAGGCCGCTGCAGCCAACAAACCGGCG...TGCCCGGCAAGAAGCAGCTAGACACACGCCAGGGCGCCAAGCACGGCCAGCTCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR GCA 90 bp CCTGCACCCCAGGCGCAATGCTGGGCACGGAGGGCAGCACAGATAAGAAGGGAGGGCTGCGCGCGGGGCTaGCCCCTTGTGGCCGGATTG +
Preference number: 4 (lower is better)
Translates to: PAPQAQCWARRAAQIRREGCARG*PLVAGL
Trigger: CAATCCGGCCACAAGGGGGCAGCCCCGCGCGCAGCC...CTCCCTTCTTATCTGTGCTGCCCTCCGTGCCCAGCATTGCGCCTGGGGTGCAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000556418.1
CDS-3UTR GCA 90 bp AAGGGAGGTGCGAGCCCGCCCGGGCATCCCATAGTGCGGGCGGGCAACACAGTCGCGTCTCGGAGTCCCTaGAAAGAGGAGCCGGCGCGT +
Preference number: 4 (lower is better)
Translates to: KGGASPPGHPIVRAGNTVASRSP*KEEPAR
Trigger: ACGCGCCGGCTCCTCTTTGCAGGGACTCCGAGACGC...GACTGTGTTGCCCGCCCGCACTATGGGATGCCCGGGCGGGCTCGCACCTCCCTT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556418.1
CDS-3UTR CCA 90 bp GAGGGGGCCCAGGCCTGCAGTGGGGCATGGGAGTCTCTCGCAGGTCATCATGGGCTTCTTCGCAGGCAGTaGCGGGGCGGGGACCTGCTG +
Preference number: 4 (lower is better)
Translates to: EGAQACSGAWESLAGHHGLLRRQ*RGGDLL
Trigger: CAGCAGGTCCCCGCCCCGCCACTGCCTGCGAAGAAG...CCCATGATGACCTGCGAGAGACTCCCATGCCCCACTGCAGGCCTGGGCCCCCTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000555589.5
CDS-3UTR CCA 90 bp GGTCCGCGGAGCTGGCCGTGCTTGGCGCCCTGGCGTGTGTCTAGCTGCTTCTTGGGCTTTGGCCCTCTCTaGGTGGACCCGGCGTGGGTG +
Preference number: 4 (lower is better)
Translates to: GPRSWPCLAPWRVSSCFLGFGPL*VDPAWV
Trigger: CACCCACGCCGGGTCCACCCAGAGAGGGCCAAAGCC...CAAGAAGCAGCTAGACACACGCCAGGGCGCCAAGCACGGCCAGCTCCGCGGACC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR CCA 90 bp GTCCGCGGAGCTGGCCGTGCTTGGCGCCCTGGCGTGTGTCTAGCTGCTTCTTGCGGCTTTGGCCCTCTCTaGGTGGACCCGGCGTGGGTG +
Preference number: 4 (lower is better)
Translates to: VRGAGRAWRPGVCLAASCGFGPL*VDPAWV
Trigger: CACCCACGCCGGGTCCACCCAGAGAGGGCCAAAGCC...GCAAGAAGCAGCTAGACACACGCCAGGGCGCCAAGCACGGCCAGCTCCGCGGAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR CCA 90 bp CCCTCTGCTGCGTGGACGTCGCGGTCGGGAGTGCGCAGCCAGAGGCGGGGCCAGGGAGCCCTTGAACTCTaGAGAGCTCTGGGAATGGGC +
Preference number: 4 (lower is better)
Translates to: PSAAWTSRSGVRSQRRGQGALEL*RALGMG
Trigger: GCCCATTCCCAGAGCTCTCCAGAGTTCAAGGGCTCC...CTGGCCCCGCCTCTGGCTGCGCACTCCCGACCGCGACGTCCACGCAGCAGAGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR CCA 90 bp TGCCGGGCACAGAGCTGCGGGGTCTGGGGGCACCGGGAGCTAAGAGCAGGCTCTTGTCCCTCTGCTGCGTaGACGTCGCGGTCGGGAGTG +
Preference number: 4 (lower is better)
Translates to: CRAQSCGVWGHRELRAGSCPSAA*TSRSGV
Trigger: CACTCCCGACCGCGACGTCCACGCAGCAGAGGGACA...AGAGCCTGCTCTTAGCTCCCGGTGCCCCCAGACCCCGCAGCTCTGTGCCCGGCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR CCA 90 bp TGGGTCCGCGGAGCTGGCCGTGCTTGGCGCCCTGGCGTGTGTCTAGCTGCTTCTAGGGCGCCGGTTTGTTaGCTGCAGCGGCCTGGAGCG +
Preference number: 4 (lower is better)
Translates to: WVRGAGRAWRPGVCLAASRAPVC*LQRPGA
Trigger: CGCTCCAGGCCGCTGCAGCCAACAAACCGGCGCCCT...AGAAGCAGCTAGACACACGCCAGGGCGCCAAGCACGGCCAGCTCCGCGGACCCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR CCA 90 bp TGCCGGGCACAGAGCTGCGGGGTCTGGGGGCACCGGGAGCTAAGAGCAGGCTCTTGGGTCCACCCTGAGTaGCACGGGGAGCAGCTGTGG +
Preference number: 4 (lower is better)
Translates to: CRAQSCGVWGHRELRAGSWVHPE*HGEQLW
Trigger: CCACAGCTGCTCCCCGTGCCACTCAGGGTGGACCCA...AGAGCCTGCTCTTAGCTCCCGGTGCCCCCAGACCCCGCAGCTCTGTGCCCGGCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR CCA 90 bp CCTCCCTGGATGGATAGCGGGTGGCGGGCGCCAAGCTGTCTGCGAGTCCGGCACGCGTCCCCTGGCTGCTaGTCCACAGGCTCCCCATCA +
Preference number: 4 (lower is better)
Translates to: PPWMDSGWRAPSCLRVRHASPGC*STGSPS
Trigger: TGATGGGGAGCCTGTGGACCAGCAGCCAGGGGACGC...GTGCCGGACTCGCAGACAGCTTGGCGCCCGCCACCCGCTATCCATCCAGGGAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556418.1
3UTR CAA 72 bp GGGAAAGGCCCTGTTTTCCCTGAGGCGGGGCTGGGCTaGTCCATGGGTCCGCGGAGCTGGCCGTGCTTGGCG +
Preference number: 4 (lower is better)
Translates to: GKGPVFPEAGLG*SMGPRSWPCLA
Trigger: CGCCAAGCACGGCCAGCTCCGCGGACCCATGGACAAGCCCAGCCCCGCCTCAGGGAAAACAGGGCCTTTCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR TCA 90 bp GGGGAGCAGCTGTGGCCGGTGCTCCTTCCTAGGCCAGTCCTGGGGAAACTAAGCCTTGGGGAGGCAGGCTaGGCTGGTCCCCCTCTGCCG +
Preference number: 4 (lower is better)
Translates to: GEQLWPVLLPRPVLGKLSLGEAG*AGPPLP
Trigger: CGGCAGAGGGGGACCAGCTCAGCCTGCCTCCCCAAG...GCTTAGTTTCCCCAGGACTGGCCTAGGAAGGAGCACCGGCCACAGCTGCTCCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR TCA 90 bp CAGGGCCCCGTAGGTGGTGGTCAGATAGTAGGAACCCTCCCCCAGCTGCAGGGCCACCCCCAAGCTGTCTaGGAGGGAGGCCAGGGAGCC +
Preference number: 4 (lower is better)
Translates to: QGPVGGGQIVGTLPQLQGHPQAV*EGGQGA
Trigger: GGCTCCCTGGCCTCCCTCTCAGACAGCTTGGGGGTG...GCCCTGCAGCTGGGGGAGGGTTCCTACTATCTGACCACCACCTACGGGGCCCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000555589.5
CDS-3UTR TCA 90 bp AGTGGCACGGGGAGCAGCTGTGGCCGGTGCTCCTTCCTAGGCCAGTCCTGGGGAGCAGCAGGTAGCCCTTaGTGCAGTGCGGCAGCGCGT +
Preference number: 4 (lower is better)
Translates to: SGTGSSCGRCSFLGQSWGAAGSP*CSAAAR
Trigger: ACGCGCTGCCGCACTGCATCAAGGGCTACCTGCTGC...TCCCCAGGACTGGCCTAGGAAGGAGCACCGGCCACAGCTGCTCCCCGTGCCACT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR TCA 90 bp GGGCCCTTCCTCTGGTGTGGGGAGTCTCACTGCTCCCCTAAGGCAGGGCTGGGCCTGCCTGTGTGGCCTTaGTTCGTCGAGCCCCGGCTG +
Preference number: 4 (lower is better)
Translates to: GPFLWCGESHCSPKAGLGLPVWP*FVEPRL
Trigger: CAGCCGGGGCTCGACGAATCAAGGCCACACAGGCAG...GCCCAGCCCTGCCTTAGGGGAGCAGTGAGACTCCCCACACCAGAGGAAGGGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000556418.1
CDS-3UTR GCA 90 bp GGGGAGCAGCTGTGGCCGGTGCTCCTTCCTAGGCCAGTCCTGGGGAAACTAAGCCGGCGTGTCGGATCATaGCGCCGGCAGCTCCGGGAC +
Preference number: 4 (lower is better)
Translates to: GEQLWPVLLPRPVLGKLSRRVGS*RRQLRD
Trigger: GTCCCGGAGCTGCCGGCGGCATGATCCGACACGCCG...GCTTAGTTTCCCCAGGACTGGCCTAGGAAGGAGCACCGGCCACAGCTGCTCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR GCA 90 bp GCACAGAGCTGCGGGGTCTGGGGGCACCGGGAGCTAAGAGCAGGCTCTGGTGCAGAGCTGGTCCCCCTCTaGCGCCATCCCCGGACTTTG +
Preference number: 4 (lower is better)
Translates to: AQSCGVWGHRELRAGSGAELVPL*RHPRTL
Trigger: CAAAGTCCGGGGATGGCGGCAGAGGGGGACCAGCTC...TGCACCAGAGCCTGCTCTTAGCTCCCGGTGCCCCCAGACCCCGCAGCTCTGTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR GCA 90 bp CTGCGGAGACGCGAGGGGCCTGTGGTCACGGCGGGGCCCTGTCTCCTCAGGCGCAGTCCTGCACCAGGCTaGCAAAGTACGAGCCCTTGT +
Preference number: 4 (lower is better)
Translates to: LRRREGPVVTAGPCLLRRSPAPG*QSTSPC
Trigger: ACAAGGGCTCGTACTTTGGCAGCCTGGTGCAGGACT...GCGCCTGAGGAGACAGGGCCCCGCCGTGACCACAGGCCCCTCGCGTCTCCGCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556418.1
CDS-3UTR GCA 90 bp ATGGGTCCGCGGAGCTGGCCGTGCTTGGCGCCCTGGCGTGTGTCTAGCTGCTTCCCTGCAGCATCTCCGTaGTGGAGGTCTGGCGCGCCA +
Preference number: 4 (lower is better)
Translates to: MGPRSWPCLAPWRVSSCFPAASP*WRSGAP
Trigger: TGGCGCGCCAGACCTCCAGCACGGAGATGCTGCAGG...GAAGCAGCTAGACACACGCCAGGGCGCCAAGCACGGCCAGCTCCGCGGACCCAT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR GCA 90 bp GGGGAGCAGCTGTGGCCGGTGCTCCTTCCTAGGCCAGTCCTGGGGAAACTAAGCGCCAGCGTCCGCGCCTaGTGCTCGGGCTCCAGGTAC +
Preference number: 4 (lower is better)
Translates to: GEQLWPVLLPRPVLGKLSASVRA*CSGSRY
Trigger: GTACCTGGAGCCCGAGCAGCAGGCGCGGACGCTGGC...GCTTAGTTTCCCCAGGACTGGCCTAGGAAGGAGCACCGGCCACAGCTGCTCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR GCA 90 bp GGAGCTGGCCGTGCTTGGCGCCCTGGCGTGTGTCTAGCTGCTTCTTGCCGGGCATGGCCCATGTCCCTCTaGTGCGTGGACGTCGCGGTC +
Preference number: 4 (lower is better)
Translates to: GAGRAWRPGVCLAASCRAWPMSL*CVDVAV
Trigger: GACCGCGACGTCCACGCAGCAGAGGGACATGGGCCA...TGCCCGGCAAGAAGCAGCTAGACACACGCCAGGGCGCCAAGCACGGCCAGCTCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR GCA 90 bp AAGGGAGGTGCGAGCCCGCCCGGGCATCCCATAGTGCGGGCGGGCAACACAGTCGCAGGAAGTACGGGATaGCTGGGCCAGGCTTGGACC +
Preference number: 4 (lower is better)
Translates to: KGGASPPGHPIVRAGNTVAGSTG*LGQAWT
Trigger: GGTCCAAGCCTGGCCCAGGCATCCCGTACTTCCTGC...GACTGTGTTGCCCGCCCGCACTATGGGATGCCCGGGCGGGCTCGCACCTCCCTT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556418.1
CDS-3UTR GCA 90 bp GGGCCCTTCCTCTGGTGTGGGGAGTCTCACTGCTCCCCTAAGGCAGGGCTGGGCCCCCAAGGCATGGTGTaGGGAGGAGGCACTGGGAGG +
Preference number: 4 (lower is better)
Translates to: GPFLWCGESHCSPKAGLGPQGMV*GGGTGR
Trigger: CCTCCCAGTGCCTCCTCCGCACACCATGCCTTGGGG...GCCCAGCCCTGCCTTAGGGGAGCAGTGAGACTCCCCACACCAGAGGAAGGGCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000556418.1
CDS-3UTR CCA 90 bp TGTGAAGAGGGCGCCGGTTTGTTGGCTGCAGCGGCCTGGAGCGCCTCTCTCCTGGCGCCCGCATGTCCCTaGCTCTGGCCCTCTGGAAGG +
Preference number: 4 (lower is better)
Translates to: CEEGAGLLAAAAWSASLLAPACP*LWPSGR
Trigger: CCTTCCAGAGGGCCAGAGCCAGGGACATGCGGGCGC...CAGGAGAGAGGCGCTCCAGGCCGCTGCAGCCAACAAACCGGCGCCCTCTTCACA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR CCA 90 bp CTGCTCCAGCTCCTCCTCCGTGCTGCTGGTGGAGTAGGAGTCCTGGTCGGTGGCCCCGGTGCAGGATCCTaGCCACCTCTGCCTGGCCCA +
Preference number: 4 (lower is better)
Translates to: LLQLLLRAAGGVGVLVGGPGAGS*PPLPGP
Trigger: TGGGCCAGGCAGAGGTGGCCAGGATCCTGCACCGGG...GCCACCGACCAGGACTCCTACTCCACCAGCAGCACGGAGGAGGAGCTGGAGCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555589.5
CDS-3UTR CCA 90 bp TGGCACGGGGAGCAGCTGTGGCCGGTGCTCCTTCCTAGGCCAGTCCTGGGGAAAGAGGTGGCTGGTCGGTaGGCAGGGCGCTGCTGCAGT +
Preference number: 4 (lower is better)
Translates to: WHGEQLWPVLLPRPVLGKEVAGR*AGRCCS
Trigger: ACTGCAGCAGCGCCCTGCCCACCGACCAGCCACCTC...TTTCCCCAGGACTGGCCTAGGAAGGAGCACCGGCCACAGCTGCTCCCCGTGCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR CCA 90 bp TGTGAAGAGGGCGCCGGTTTGTTGGCTGCAGCGGCCTGGAGCGCCTCTCTCCTGCTTCTTCGCAGGCAGTaGCGGGGCGGGGACCTGCTG +
Preference number: 4 (lower is better)
Translates to: CEEGAGLLAAAAWSASLLLLRRQ*RGGDLL
Trigger: CAGCAGGTCCCCGCCCCGCCACTGCCTGCGAAGAAG...CAGGAGAGAGGCGCTCCAGGCCGCTGCAGCCAACAAACCGGCGCCCTCTTCACA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216487.12
CDS-3UTR CCA 90 bp GGAGCTGGCCGTGCTTGGCGCCCTGGCGTGTGTCTAGCTGCTTCTTGCCGGGCATGGGTGGACCCGGCGTaGGTGTCTCCAAGGCCATCG +
Preference number: 4 (lower is better)
Translates to: GAGRAWRPGVCLAASCRAWVDPA*VSPRPS
Trigger: CGATGGCCTTGGAGACACCCACGCCGGGTCCACCCA...TGCCCGGCAAGAAGCAGCTAGACACACGCCAGGGCGCCAAGCACGGCCAGCTCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR CCA 90 bp CTGCGGAGACGCGAGGGGCCTGTGGTCACGGCGGGGCCCTGTCTCCTCAGGCGCCCTTGCCCAGGATCATaGAGGGCTTCTTCTTCACGC +
Preference number: 4 (lower is better)
Translates to: LRRREGPVVTAGPCLLRRPCPGS*RASSSR
Trigger: GCGTGAAGAAGAAGCCCTCCATGATCCTGGGCAAGG...GCGCCTGAGGAGACAGGGCCCCGCCGTGACCACAGGCCCCTCGCGTCTCCGCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556418.1
CDS-3UTR CCA 90 bp CTGCGGAGACGCGAGGGGCCTGTGGTCACGGCGGGGCCCTGTCTCCTCAGGCGCTCACACCTAGGTCAGTaGTGGTGGTGGCCAGGATCA +
Preference number: 4 (lower is better)
Translates to: LRRREGPVVTAGPCLLRRSHLGQ*WWWPGS
Trigger: TGATCCTGGCCACCACCACCACTGACCTAGGTGTGA...GCGCCTGAGGAGACAGGGCCCCGCCGTGACCACAGGCCCCTCGCGTCTCCGCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556418.1
CDS-3UTR CCA 90 bp GATAGCGGGTGGCGGGCGCCAAGCTGTCTGCGAGTCCGGCACCTGCGCCTTTCCGCACCTCCGGCACGCTaGTGGTCACACCTAGGTCAG +
Preference number: 4 (lower is better)
Translates to: DSGWRAPSCLRVRHLRLSAPPAR*WSHLGQ
Trigger: CTGACCTAGGTGTGACCACCAGCGTGCCGGAGGTGC...GGAAAGGCGCAGGTGCCGGACTCGCAGACAGCTTGGCGCCCGCCACCCGCTATC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556418.1
CDS-3UTR CCA 90 bp CCTCCCTGGATGGATAGCGGGTGGCGGGCGCCAAGCTGTCTGCGAGTCCGGCACGCTCCCAGCGGTGGATaGAGTCCTGCACCTCCACAC +
Preference number: 4 (lower is better)
Translates to: PPWMDSGWRAPSCLRVRHAPSGG*SPAPPH
Trigger: GTGTGGAGGTGCAGGACTCCATCCACCGCTGGGAGC...GTGCCGGACTCGCAGACAGCTTGGCGCCCGCCACCCGCTATCCATCCAGGGAGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556418.1
CDS-3UTR CCA 90 bp CCAGCCCCACACCTGCCGGGCTTTGCCTTTGCTCCCACTGCCTGTGTGGCCTTGCGGCGCTCCCAGCGGTaGATGGAGTCCTGCACCTCC +
Preference number: 4 (lower is better)
Translates to: PAPHLPGFAFAPTACVALRRSQR*MESCTS
Trigger: GGAGGTGCAGGACTCCATCCACCGCTGGGAGCGCCG...CAAGGCCACACAGGCAGTGGGAGCAAAGGCAAAGCCCGGCAGGTGTGGGGCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556418.1
CDS-3UTR CCA 90 bp TGGGTCCGCGGAGCTGGCCGTGCTTGGCGCCCTGGCGTGTGTCTAGCTGCTTCTGGCCTCACAGGAAGTTaGGCTCCCGCACCACCAGGC +
Preference number: 4 (lower is better)
Translates to: WVRGAGRAWRPGVCLAASGLTGS*APAPPG
Trigger: GCCTGGTGGTGCGGGAGCCCAACTTCCTGTGAGGCC...AGAAGCAGCTAGACACACGCCAGGGCGCCAAGCACGGCCAGCTCCGCGGACCCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR CCA 90 bp CCGGGCACAGAGCTGCGGGGTCTGGGGGCACCGGGAGCTAAGAGCAGGCTCTGGGGCCTGGGCACGTCATaGAATGGCCCATGTCCCTCT +
Preference number: 4 (lower is better)
Translates to: PGTELRGLGAPGAKSRLWGLGTS*NGPCPS
Trigger: AGAGGGACATGGGCCATTCCATGACGTGCCCAGGCC...CCAGAGCCTGCTCTTAGCTCCCGGTGCCCCCAGACCCCGCAGCTCTGTGCCCGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR CCA 90 bp TGGGTCCGCGGAGCTGGCCGTGCTTGGCGCCCTGGCGTGTGTCTAGCTGCTTCTTGGGTCCACCCTGAGTaGCACGGGGAGCAGCTGTGG +
Preference number: 4 (lower is better)
Translates to: WVRGAGRAWRPGVCLAASWVHPE*HGEQLW
Trigger: CCACAGCTGCTCCCCGTGCCACTCAGGGTGGACCCA...AGAAGCAGCTAGACACACGCCAGGGCGCCAAGCACGGCCAGCTCCGCGGACCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR CCA 90 bp ATGGGTCCGCGGAGCTGGCCGTGCTTGGCGCCCTGGCGTGTGTCTAGCTGCTTCGGAGCTGGCCGTGCTTaGCGCCCTGGCGTGTGTCTA +
Preference number: 4 (lower is better)
Translates to: MGPRSWPCLAPWRVSSCFGAGRA*RPGVCL
Trigger: TAGACACACGCCAGGGCGCCAAGCACGGCCAGCTCC...GAAGCAGCTAGACACACGCCAGGGCGCCAAGCACGGCCAGCTCCGCGGACCCAT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR CCA 90 bp AAGGGAGGTGCGAGCCCGCCCGGGCATCCCATAGTGCGGGCGGGCAACACAGTCTGGATGGATAGCGGGTaGCGGGCGCCAAGCTGTCTG +
Preference number: 4 (lower is better)
Translates to: KGGASPPGHPIVRAGNTVWMDSG*RAPSCL
Trigger: CAGACAGCTTGGCGCCCGCCACCCGCTATCCATCCA...GACTGTGTTGCCCGCCCGCACTATGGGATGCCCGGGCGGGCTCGCACCTCCCTT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556418.1
3UTR CAA 72 bp AAGTCCTGTACGGAGGAGCGGGAGGCCCGGGCCTTGTaGAGAGTACGCCGGCGCTCCCAGCGGTGGATGGAG +
Preference number: 4 (lower is better)
Translates to: KSCTEEREARAL*RVRRRSQRWME
Trigger: CTCCATCCACCGCTGGGAGCGCCGGCGTACTCTCAACAAGGCCCGGGCCTCCCGCTCCTCCGTACAGGACTT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555589.5
CDS-3UTR TCA 90 bp CCGGACTTTGGTCTTCTAAGGACACCCTCTCGGAAACGCGGCGTCTGGGAGGGGCTTGGGGAGGCAGGCTaGGCTGGTCCCCCTCTGCCG +
Preference number: 4 (lower is better)
Translates to: PDFGLLRTPSRKRGVWEGLGEAG*AGPPLP
Trigger: CGGCAGAGGGGGACCAGCTCAGCCTGCCTCCCCAAG...CCCCTCCCAGACGCCGCGTTTCCGAGAGGGTGTCCTTAGAAGACCAAAGTCCGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000555589.5
CDS-3UTR TCA 90 bp TGGGTCCGCGGAGCTGGCCGTGCTTGGCGCCCTGGCGTGTGTCTAGCTGCTTCTCCTGGTCGGTGGCCATaGCAGACACCCCCAAGCTGT +
Preference number: 4 (lower is better)
Translates to: WVRGAGRAWRPGVCLAASPGRWP*QTPPSC
Trigger: ACAGCTTGGGGGTGTCTGTCATGGCCACCGACCAGG...AGAAGCAGCTAGACACACGCCAGGGCGCCAAGCACGGCCAGCTCCGCGGACCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR TCA 90 bp GATAGCGGGTGGCGGGCGCCAAGCTGTCTGCGAGTCCGGCACCTGCGCCTTTCCGCAGGGCGGGGTCCATaGGCTCCATCATGTACTCCA +
Preference number: 4 (lower is better)
Translates to: DSGWRAPSCLRVRHLRLSAGRGP*APSCTP
Trigger: TGGAGTACATGATGGAGCTCATGGACCCCGCCCTGC...GGAAAGGCGCAGGTGCCGGACTCGCAGACAGCTTGGCGCCCGCCACCCGCTATC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556418.1
CDS-3UTR TCA 90 bp GGCACGTCATGGAATGGCCCATGTCCCTCTGCTGCGTGGACGTCGCGGTCGGGAATGCTGGGTCCACCCTaGGTGGCACGGGGAGCAGCT +
Preference number: 4 (lower is better)
Translates to: GTSWNGPCPSAAWTSRSGMLGPP*VARGAA
Trigger: AGCTGCTCCCCGTGCCACTCAGGGTGGACCCAGCAT...TCCCGACCGCGACGTCCACGCAGCAGAGGGACATGGGCCATTCCATGACGTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR TCA 90 bp TGGGTCCGCGGAGCTGGCCGTGCTTGGCGCCCTGGCGTGTGTCTAGCTGCTTCTACCCTGAGGTGCTCCTaGGATGCTGGGTCCACCCTG +
Preference number: 4 (lower is better)
Translates to: WVRGAGRAWRPGVCLAASTLRCS*DAGSTL
Trigger: CAGGGTGGACCCAGCATCTCAGGAGCACCTCAGGGT...AGAAGCAGCTAGACACACGCCAGGGCGCCAAGCACGGCCAGCTCCGCGGACCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR TCA 90 bp TCCCTCCAGGTGAGTTCCCTGCACCCCAGGCGCAATGCTGGGCACGGAGGGCAGGCTGGAGCAGCCAGGTaGTGTCACGGCTCCTTAGCC +
Preference number: 4 (lower is better)
Translates to: SLQVSSLHPRRNAGHGGQAGAAR*CHGSLA
Trigger: GGCTAAGGAGCCGTGACATCACCTGGCTGCTCCAGC...CTGCCCTCCGTGCCCAGCATTGCGCCTGGGGTGCAGGGAACTCACCTGGAGGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556418.1
CDS-3UTR TCA 90 bp GCGAGGCGACGCCTGCGGGCTGGGGCTGGGCACTCGCAGCACGAGCAGGGCGCCAACACCAATGCCTGCTaGTATGTTTCTAGACGCACC +
Preference number: 4 (lower is better)
Translates to: ARRRLRAGAGHSQHEQGANTNAC*YVSRRT
Trigger: GGTGCGTCTAGAAACATATCAGCAGGCATTGGTGTT...GGCGCCCTGCTCGTGCTGCGAGTGCCCAGCCCCAGCCCGCAGGCGTCGCCTCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556418.1
CDS-3UTR TCA 90 bp AAGGGAGGTGCGAGCCCGCCCGGGCATCCCATAGTGCGGGCGGGCAACACAGTCTGTGGGCAGGAAAACTaGGTCCCAGAGTGGGGCAGG +
Preference number: 4 (lower is better)
Translates to: KGGASPPGHPIVRAGNTVCGQEN*VPEWGR
Trigger: CCTGCCCCACTCTGGGACTCAGTTTTCCTGCCCACA...GACTGTGTTGCCCGCCCGCACTATGGGATGCCCGGGCGGGCTCGCACCTCCCTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556418.1
CDS-3UTR GCA 90 bp CTGTGTCCTGGCCTTGCTCCGTGCTCTCCCGGGGCGTGTCCTCAGGGCCGTCTGTGGCCCAGACTCAGCTaGAGCCACACCGGGCATGTT +
Preference number: 4 (lower is better)
Translates to: LCPGLAPCSPGACPQGRLWPRLS*SHTGHV
Trigger: AACATGCCCGGTGTGGCTGCAGCTGAGTCTGGGCCA...CAGACGGCCCTGAGGACACGCCCCGGGAGAGCACGGAGCAAGGCCAGGACACAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555589.5
CDS-3UTR GCA 90 bp GTCCGCGGAGCTGGCCGTGCTTGGCGCCCTGGCGTGTGTCTAGCTGCTTCTTGCCCAGCTGCTTCGAGCTaGTGTCCCGGCGAACCAGGA +
Preference number: 4 (lower is better)
Translates to: VRGAGRAWRPGVCLAASCPAASS*CPGEPG
Trigger: TCCTGGTTCGCCGGGACAGCAGCTCGAAGCAGCTGG...GCAAGAAGCAGCTAGACACACGCCAGGGCGCCAAGCACGGCCAGCTCCGCGGAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR GCA 90 bp GCTCCAGGGCCCCGTAGGTGGTGGTCAGATAGTAGGAACCCTCCCCCAGCTGCACCTGGCCTTGCTCCGTaGTCTCCCGGGGCGTGTCCT +
Preference number: 4 (lower is better)
Translates to: APGPRRWWSDSRNPPPAAPGLAP*SPGACP
Trigger: AGGACACGCCCCGGGAGAGCACGGAGCAAGGCCAGG...TGCAGCTGGGGGAGGGTTCCTACTATCTGACCACCACCTACGGGGCCCTGGAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000555589.5
CDS-3UTR GCA 90 bp AAGGGAGGTGCGAGCCCGCCCGGGCATCCCATAGTGCGGGCGGGCAACACAGTCGCTCCTCCTCCGTGCTaGTGGTGGAGTAGGAGTCCT +
Preference number: 4 (lower is better)
Translates to: KGGASPPGHPIVRAGNTVAPPPC*WWSRSP
Trigger: AGGACTCCTACTCCACCAGCAGCACGGAGGAGGAGC...GACTGTGTTGCCCGCCCGCACTATGGGATGCCCGGGCGGGCTCGCACCTCCCTT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556418.1
CDS-3UTR GCA 90 bp ATGGGTCCGCGGAGCTGGCCGTGCTTGGCGCCCTGGCGTGTGTCTAGCTGCTTCGCAAAGCTCAGCCGGTaGCGAGCCTTGCCCAGGATC +
Preference number: 4 (lower is better)
Translates to: MGPRSWPCLAPWRVSSCFAKLSR*RALPRI
Trigger: GATCCTGGGCAAGGCTCGGCACCGGCTGAGCTTTGC...GAAGCAGCTAGACACACGCCAGGGCGCCAAGCACGGCCAGCTCCGCGGACCCAT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR GCA 90 bp GGGGAGCAGCTGTGGCCGGTGCTCCTTCCTAGGCCAGTCCTGGGGAAACTAAGCAACTTCTCCGCGCACTaGGCGCACAGCGCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: GEQLWPVLLPRPVLGKLSNFSAH*AHSAWA
Trigger: GGCCCAGGCGCTGTGCGCGCAGTGCGCGGAGAAGTT...GCTTAGTTTCCCCAGGACTGGCCTAGGAAGGAGCACCGGCCACAGCTGCTCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR GCA 90 bp TCTCCCCACACGATGGCTCCTGCAATCTGCCACAGCTCTGGGGCGTGTCCTGTACCGCGGAGCTGGCCGTaGTTGGCGCCCTGGCGTGTG +
Preference number: 4 (lower is better)
Translates to: SPHTMAPAICHSSGACPVPRSWP*LAPWRV
Trigger: CACACGCCAGGGCGCCAAGCACGGCCAGCTCCGCGG...TACAGGACACGCCCCAGAGCTGTGGCAGATTGCAGGAGCCATCGTGTGGGGAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR GCA 90 bp CTGCGGAGACGCGAGGGGCCTGTGGTCACGGCGGGGCCCTGTCTCCTCAGGCGCGTGAGTCTGCATAGCTaGTCACAGCTCTGGATGTGC +
Preference number: 4 (lower is better)
Translates to: LRRREGPVVTAGPCLLRRVSLHS*SQLWMC
Trigger: GCACATCCAGAGCTGTGAGCAGCTATGCAGACTCAC...GCGCCTGAGGAGACAGGGCCCCGCCGTGACCACAGGCCCCTCGCGTCTCCGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556418.1
CDS-3UTR CCA 90 bp AATGGCCCATGTCCCTCTGCTGCGTGGACGTCGCGGTCGGGAGTGCGCAGCCAGTGCTGGCCTCAAGGATaGCCTGGGGTAGCCGCAGTG +
Preference number: 4 (lower is better)
Translates to: NGPCPSAAWTSRSGVRSQCWPQG*PGVAAV
Trigger: CACTGCGGCTACCCCAGGCCATCCTTGAGGCCAGCA...CTGGCTGCGCACTCCCGACCGCGACGTCCACGCAGCAGAGGGACATGGGCCATT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR CCA 90 bp AGTGGCACGGGGAGCAGCTGTGGCCGGTGCTCCTTCCTAGGCCAGTCCTGGGGATTTCCAAGAGGTGGCTaGTCGGTGGGCAGGGCGCTG +
Preference number: 4 (lower is better)
Translates to: SGTGSSCGRCSFLGQSWGFPRGG*SVGRAL
Trigger: CAGCGCCCTGCCCACCGACCAGCCACCTCTTGGAAA...TCCCCAGGACTGGCCTAGGAAGGAGCACCGGCCACAGCTGCTCCCCGTGCCACT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR CCA 90 bp TGGGTCCGCGGAGCTGGCCGTGCTTGGCGCCCTGGCGTGTGTCTAGCTGCTTCTAGGTGGCATCAGAGGTaGGCGGCAAAGGGCGTGCAG +
Preference number: 4 (lower is better)
Translates to: WVRGAGRAWRPGVCLAASRWHQR*AAKGVQ
Trigger: CTGCACGCCCTTTGCCGCCCACCTCTGATGCCACCT...AGAAGCAGCTAGACACACGCCAGGGCGCCAAGCACGGCCAGCTCCGCGGACCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR CCA 90 bp AATGGCCCATGTCCCTCTGCTGCGTGGACGTCGCGGTCGGGAGTGCGCAGCCAGTGGAGGTGGGTGAGGTaGCATCAGAGGTGGGCGGCA +
Preference number: 4 (lower is better)
Translates to: NGPCPSAAWTSRSGVRSQWRWVR*HQRWAA
Trigger: TGCCGCCCACCTCTGATGCCACCTCACCCACCTCCA...CTGGCTGCGCACTCCCGACCGCGACGTCCACGCAGCAGAGGGACATGGGCCATT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR CCA 90 bp GGTCCGCGGAGCTGGCCGTGCTTGGCGCCCTGGCGTGTGTCTAGCTGCTTCTTGTGGAGGTGGGTGAGGTaGCATCAGAGGTGGGCGGCA +
Preference number: 4 (lower is better)
Translates to: GPRSWPCLAPWRVSSCFLWRWVR*HQRWAA
Trigger: TGCCGCCCACCTCTGATGCCACCTCACCCACCTCCA...CAAGAAGCAGCTAGACACACGCCAGGGCGCCAAGCACGGCCAGCTCCGCGGACC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR CCA 90 bp TGGCACGGGGAGCAGCTGTGGCCGGTGCTCCTTCCTAGGCCAGTCCTGGGGAAAGGGCCCACCTGGAGGTaGGTGAGGTGGCATCAGAGG +
Preference number: 4 (lower is better)
Translates to: WHGEQLWPVLLPRPVLGKGPTWR*VRWHQR
Trigger: CCTCTGATGCCACCTCACCCACCTCCAGGTGGGCCC...TTTCCCCAGGACTGGCCTAGGAAGGAGCACCGGCCACAGCTGCTCCCCGTGCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR CCA 90 bp GTCCGCGGAGCTGGCCGTGCTTGGCGCCCTGGCGTGTGTCTAGCTGCTTCTTGCATGGTCTGGGGGACCTaGGGCATGGGGTGTGACGTG +
Preference number: 4 (lower is better)
Translates to: VRGAGRAWRPGVCLAASCMVWGT*GMGCDV
Trigger: CACGTCACACCCCATGCCCCAGGTCCCCCAGACCAT...GCAAGAAGCAGCTAGACACACGCCAGGGCGCCAAGCACGGCCAGCTCCGCGGAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000216487.12
CDS-3UTR CCA 90 bp GGGGAGCAGCTGTGGCCGGTGCTCCTTCCTAGGCCAGTCCTGGGGAAACTAAGCGGAGGCAGGCTGAGCTaGTCCCCCTCTGCCGCCATC +
Preference number: 4 (lower is better)
Translates to: GEQLWPVLLPRPVLGKLSGGRLS*SPSAAI
Trigger: GATGGCGGCAGAGGGGGACCAGCTCAGCCTGCCTCC...GCTTAGTTTCCCCAGGACTGGCCTAGGAAGGAGCACCGGCCACAGCTGCTCCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR CCA 90 bp CCCTCTGCTGCGTGGACGTCGCGGTCGGGAGTGCGCAGCCAGAGGCGGGGCCAGTGCTGTGAGGATCGCTaGCTTTCACCTCTGTGTCCT +
Preference number: 4 (lower is better)
Translates to: PSAAWTSRSGVRSQRRGQCCEDR*LSPLCP
Trigger: AGGACACAGAGGTGAAAGCCAGCGATCCTCACAGCA...CTGGCCCCGCCTCTGGCTGCGCACTCCCGACCGCGACGTCCACGCAGCAGAGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR CCA 90 bp CGAGGCCGGGCTCCTGTCAAGAGCTTCACGGGGACCGCCCATTTCTTCCAGGAGGGCTTTGGCCCTCTCTaGGTGGACCCGGCGTGGGTG +
Preference number: 4 (lower is better)
Translates to: RGRAPVKSFTGTAHFFQEGFGPL*VDPAWV
Trigger: CACCCACGCCGGGTCCACCCAGAGAGGGCCAAAGCC...CTCCTGGAAGAAATGGGCGGTCCCCGTGAAGCTCTTGACAGGAGCCCGGCCTCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556418.1
CDS-3UTR CCA 90 bp GTCCGCGGAGCTGGCCGTGCTTGGCGCCCTGGCGTGTGTCTAGCTGCTTCTTGCCCTCCGTGCTGCTGGTaGAGTAGGAGTCCTGGTCGG +
Preference number: 4 (lower is better)
Translates to: VRGAGRAWRPGVCLAASCPPCCW*SRSPGR
Trigger: CCGACCAGGACTCCTACTCCACCAGCAGCACGGAGG...GCAAGAAGCAGCTAGACACACGCCAGGGCGCCAAGCACGGCCAGCTCCGCGGAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR CCA 90 bp AGTGGCACGGGGAGCAGCTGTGGCCGGTGCTCCTTCCTAGGCCAGTCCTGGGGACCTCCGTGCTGCTGGTaGAGTAGGAGTCCTGGTCGG +
Preference number: 4 (lower is better)
Translates to: SGTGSSCGRCSFLGQSWGPPCCW*SRSPGR
Trigger: CCGACCAGGACTCCTACTCCACCAGCAGCACGGAGG...TCCCCAGGACTGGCCTAGGAAGGAGCACCGGCCACAGCTGCTCCCCGTGCCACT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR CCA 90 bp ATGGGTCCGCGGAGCTGGCCGTGCTTGGCGCCCTGGCGTGTGTCTAGCTGCTTCGCACCTCCGGCACGCTaGTGGTCACACCTAGGTCAG +
Preference number: 4 (lower is better)
Translates to: MGPRSWPCLAPWRVSSCFAPPAR*WSHLGQ
Trigger: CTGACCTAGGTGTGACCACCAGCGTGCCGGAGGTGC...GAAGCAGCTAGACACACGCCAGGGCGCCAAGCACGGCCAGCTCCGCGGACCCAT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR CCA 90 bp GGGCCCTTCCTCTGGTGTGGGGAGTCTCACTGCTCCCCTAAGGCAGGGCTGGGCCCCATAGGGCTTCCCTaGGTTGCCGAGGGCCATGGA +
Preference number: 4 (lower is better)
Translates to: GPFLWCGESHCSPKAGLGPIGLP*VAEGHG
Trigger: TCCATGGCCCTCGGCAACCCAGGGAAGCCCTATGGG...GCCCAGCCCTGCCTTAGGGGAGCAGTGAGACTCCCCACACCAGAGGAAGGGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000556418.1
CDS-3UTR CCA 90 bp ATGGGTCCGCGGAGCTGGCCGTGCTTGGCGCCCTGGCGTGTGTCTAGCTGCTTCCCCATAGGGCTTCCCTaGGTTGCCGAGGGCCATGGA +
Preference number: 4 (lower is better)
Translates to: MGPRSWPCLAPWRVSSCFPIGLP*VAEGHG
Trigger: TCCATGGCCCTCGGCAACCCAGGGAAGCCCTATGGG...GAAGCAGCTAGACACACGCCAGGGCGCCAAGCACGGCCAGCTCCGCGGACCCAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR CCA 90 bp GGGGAGCAGCTGTGGCCGGTGCTCCTTCCTAGGCCAGTCCTGGGGAAACTAAGCCGGCGCTCCCAGCGGTaGATGGAGTCCTGCACCTCC +
Preference number: 4 (lower is better)
Translates to: GEQLWPVLLPRPVLGKLSRRSQR*MESCTS
Trigger: GGAGGTGCAGGACTCCATCCACCGCTGGGAGCGCCG...GCTTAGTTTCCCCAGGACTGGCCTAGGAAGGAGCACCGGCCACAGCTGCTCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR CCA 90 bp AATGGCCCATGTCCCTCTGCTGCGTGGACGTCGCGGTCGGGAGTGCGCAGCCAGCCTGCGACGTTGGCCTaGGCACGTCATGGAATGGCC +
Preference number: 4 (lower is better)
Translates to: NGPCPSAAWTSRSGVRSQPATLA*ARHGMA
Trigger: GGCCATTCCATGACGTGCCCAGGCCAACGTCGCAGG...CTGGCTGCGCACTCCCGACCGCGACGTCCACGCAGCAGAGGGACATGGGCCATT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR CCA 90 bp TGGGTCCGCGGAGCTGGCCGTGCTTGGCGCCCTGGCGTGTGTCTAGCTGCTTCTCCTGCGACGTTGGCCTaGGCACGTCATGGAATGGCC +
Preference number: 4 (lower is better)
Translates to: WVRGAGRAWRPGVCLAASPATLA*ARHGMA
Trigger: GGCCATTCCATGACGTGCCCAGGCCAACGTCGCAGG...AGAAGCAGCTAGACACACGCCAGGGCGCCAAGCACGGCCAGCTCCGCGGACCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR CCA 90 bp TGTGAAGAGGGCGCCGGTTTGTTGGCTGCAGCGGCCTGGAGCGCCTCTCTCCTGCACGGGGAGCAGCTGTaGCCGGTGCTCCTTCCTAGG +
Preference number: 4 (lower is better)
Translates to: CEEGAGLLAAAAWSASLLHGEQL*PVLLPR
Trigger: CCTAGGAAGGAGCACCGGCCACAGCTGCTCCCCGTG...CAGGAGAGAGGCGCTCCAGGCCGCTGCAGCCAACAAACCGGCGCCCTCTTCACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR CCA 90 bp AATGGCCCATGTCCCTCTGCTGCGTGGACGTCGCGGTCGGGAGTGCGCAGCCAGCCGTGCTTGGCGCCCTaGCGTGTGTCTAGCTGCTTC +
Preference number: 4 (lower is better)
Translates to: NGPCPSAAWTSRSGVRSQPCLAP*RVSSCF
Trigger: GAAGCAGCTAGACACACGCCAGGGCGCCAAGCACGG...CTGGCTGCGCACTCCCGACCGCGACGTCCACGCAGCAGAGGGACATGGGCCATT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR CCA 90 bp CCTGCACCCCAGGCGCAATGCTGGGCACGGAGGGCAGCACAGATAAGAAGGGAGATGGTGTCTGGGACATaGCCCCACCGGGCCCCTCCC +
Preference number: 4 (lower is better)
Translates to: PAPQAQCWARRAAQIRREMVSGT*PHRAPP
Trigger: GGGAGGGGCCCGGTGGGGCCATGTCCCAGACACCAT...CTCCCTTCTTATCTGTGCTGCCCTCCGTGCCCAGCATTGCGCCTGGGGTGCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000556418.1
CDS-3UTR CCA 90 bp CCAGCCCCACACCTGCCGGGCTTTGCCTTTGCTCCCACTGCCTGTGTGGCCTTGGAGGTGTGCTGGAGCTaGCTCACACCCGCCAGGGAG +
Preference number: 4 (lower is better)
Translates to: PAPHLPGFAFAPTACVALEVCWS*LTPARE
Trigger: CTCCCTGGCGGGTGTGAGCCAGCTCCAGCACACCTC...CAAGGCCACACAGGCAGTGGGAGCAAAGGCAAAGCCCGGCAGGTGTGGGGCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556418.1
CDS-3UTR CCA 90 bp CCTCCCTGGATGGATAGCGGGTGGCGGGCGCCAAGCTGTCTGCGAGTCCGGCACCGTGATGGCAACTGGTaGCTAGGGCTTAGGCGAGGC +
Preference number: 4 (lower is better)
Translates to: PPWMDSGWRAPSCLRVRHRDGNW*LGLRRG
Trigger: GCCTCGCCTAAGCCCTAGCCACCAGTTGCCATCACG...GTGCCGGACTCGCAGACAGCTTGGCGCCCGCCACCCGCTATCCATCCAGGGAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556418.1
CDS-3UTR CCA 90 bp CCAGCCCCACACCTGCCGGGCTTTGCCTTTGCTCCCACTGCCTGTGTGGCCTTGCCCTTGTGGCCGGATTaGGAACAGCAGGCCTGCGCG +
Preference number: 4 (lower is better)
Translates to: PAPHLPGFAFAPTACVALPLWPD*EQQACA
Trigger: CGCGCAGGCCTGCTGTTCCCAATCCGGCCACAAGGG...CAAGGCCACACAGGCAGTGGGAGCAAAGGCAAAGCCCGGCAGGTGTGGGGCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556418.1
3UTR CAA 72 bp ATGAAGTCCTGTACGGAGGAGCGGGAGGCCCGGGCCTaGTTGAGAGTACGCCGGCGCTCCCAGCGGTGGATG +
Preference number: 4 (lower is better)
Translates to: MKSCTEEREARA*LRVRRRSQRWM
Trigger: CATCCACCGCTGGGAGCGCCGGCGTACTCTCAACAAGGCCCGGGCCTCCCGCTCCTCCGTACAGGACTTCAT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555589.5
CDS-3UTR TCA 90 bp CGACACCCTGAGGTGCTCCTGAGATGCTGGGTCCACCCTGAGTGGCACGGGGAGCTGATGCCCCGGCGGTaGGGAAGGCAGTTTTTCGGG +
Preference number: 4 (lower is better)
Translates to: RHPEVLLRCWVHPEWHGELMPRR*GRQFFG
Trigger: CCCGAAAAACTGCCTTCCTCACCGCCGGGGCATCAG...CTCCCCGTGCCACTCAGGGTGGACCCAGCATCTCAGGAGCACCTCAGGGTGTCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR TCA 90 bp CCAGCCCCACACCTGCCGGGCTTTGCCTTTGCTCCCACTGCCTGTGTGGCCTTGCCTGGTCGGTGGCCATaGCAGACACCCCCAAGCTGT +
Preference number: 4 (lower is better)
Translates to: PAPHLPGFAFAPTACVALPGRWP*QTPPSC
Trigger: ACAGCTTGGGGGTGTCTGTCATGGCCACCGACCAGG...CAAGGCCACACAGGCAGTGGGAGCAAAGGCAAAGCCCGGCAGGTGTGGGGCTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000556418.1
CDS-3UTR TCA 90 bp GGGGAGCAGCTGTGGCCGGTGCTCCTTCCTAGGCCAGTCCTGGGGAAACTAAGCGCAGCAGGTAGCCCTTaGTGCAGTGCGGCAGCGCGT +
Preference number: 4 (lower is better)
Translates to: GEQLWPVLLPRPVLGKLSAAGSP*CSAAAR
Trigger: ACGCGCTGCCGCACTGCATCAAGGGCTACCTGCTGC...GCTTAGTTTCCCCAGGACTGGCCTAGGAAGGAGCACCGGCCACAGCTGCTCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR GCA 90 bp CCGAGCCTTGCCCAGGATCATGGAGGGCTTCTTCTTCACGCTGGGGCTGCTGAACGGCGTGTCGGATCATaGCGCCGGCAGCTCCGGGAC +
Preference number: 4 (lower is better)
Translates to: PSLAQDHGGLLLHAGAAERRVGS*RRQLRD
Trigger: GTCCCGGAGCTGCCGGCGGCATGATCCGACACGCCG...TTCAGCAGCCCCAGCGTGAAGAAGAAGCCCTCCATGATCCTGGGCAAGGCTCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555589.5
CDS-3UTR GCA 90 bp GAGGGGGCCCAGGCCTGCAGTGGGGCATGGGAGTCTCTCGCAGGTCATCATGGGACACAGAGCACCAGCTaGTTCGAGCTGCTGTCCCGG +
Preference number: 4 (lower is better)
Translates to: EGAQACSGAWESLAGHHGTQSTS*FELLSR
Trigger: CCGGGACAGCAGCTCGAAGCAGCTGGTGCTCTGTGT...CCCATGATGACCTGCGAGAGACTCCCATGCCCCACTGCAGGCCTGGGCCCCCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000555589.5
CDS-3UTR GCA 90 bp ATGGGTCCGCGGAGCTGGCCGTGCTTGGCGCCCTGGCGTGTGTCTAGCTGCTTCGGGCGGCAAAGGGCGTaGAGGGCAATTTCCAAGAGG +
Preference number: 4 (lower is better)
Translates to: MGPRSWPCLAPWRVSSCFGRQRA*RAISKR
Trigger: CCTCTTGGAAATTGCCCTGCACGCCCTTTGCCGCCC...GAAGCAGCTAGACACACGCCAGGGCGCCAAGCACGGCCAGCTCCGCGGACCCAT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR GCA 90 bp AACTGTCCTGCGACGTTGGCCTGGGCACGTCATGGAATGGCCCATGTCCCTCTGGGGGCGGGGACCTGCTaGAAGGGACTGGAGGCTGCC +
Preference number: 4 (lower is better)
Translates to: NCPATLAWARHGMAHVPLGAGTC*KGLEAA
Trigger: GGCAGCCTCCAGTCCCTTGCAGCAGGTCCCCGCCCC...CAGAGGGACATGGGCCATTCCATGACGTGCCCAGGCCAACGTCGCAGGACAGTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000216487.12
CDS-3UTR GCA 90 bp AACTGGCAAAGCTCAGCCGGTGCCGAGCCTTGCCCAGGATCATGGAGGGCTTCTGGCGGGGCGGGGACCTaGTGCAAGGGACTGGAGGCT +
Preference number: 4 (lower is better)
Translates to: NWQSSAGAEPCPGSWRASGGAGT*CKGLEA
Trigger: AGCCTCCAGTCCCTTGCAGCAGGTCCCCGCCCCGCC...AGAAGCCCTCCATGATCCTGGGCAAGGCTCGGCACCGGCTGAGCTTTGCCAGTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555589.5
CDS-3UTR GCA 90 bp TGGGTCCGCGGAGCTGGCCGTGCTTGGCGCCCTGGCGTGTGTCTAGCTGCTTCTGCTCCTCCTCCGTGCTaGTGGTGGAGTAGGAGTCCT +
Preference number: 4 (lower is better)
Translates to: WVRGAGRAWRPGVCLAASAPPPC*WWSRSP
Trigger: AGGACTCCTACTCCACCAGCAGCACGGAGGAGGAGC...AGAAGCAGCTAGACACACGCCAGGGCGCCAAGCACGGCCAGCTCCGCGGACCCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR GCA 90 bp GCACAGAGCTGCGGGGTCTGGGGGCACCGGGAGCTAAGAGCAGGCTCTGGTGCACCAGCTCCTCCTCCGTaGTGCTGGTGGAGTAGGAGT +
Preference number: 4 (lower is better)
Translates to: AQSCGVWGHRELRAGSGAPAPPP*CWWSRS
Trigger: ACTCCTACTCCACCAGCAGCACGGAGGAGGAGCTGG...TGCACCAGAGCCTGCTCTTAGCTCCCGGTGCCCCCAGACCCCGCAGCTCTGTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR GCA 90 bp CCAGCCCCACACCTGCCGGGCTTTGCCTTTGCTCCCACTGCCTGTGTGGCCTTGCTGGGGCTGCTGAACTaGTCCAGCTCCTCCTCCGTG +
Preference number: 4 (lower is better)
Translates to: PAPHLPGFAFAPTACVALLGLLN*SSSSSV
Trigger: CACGGAGGAGGAGCTGGAGCAGTTCAGCAGCCCCAG...CAAGGCCACACAGGCAGTGGGAGCAAAGGCAAAGCCCGGCAGGTGTGGGGCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556418.1
CDS-3UTR GCA 90 bp TGTGAAGAGGGCGCCGGTTTGTTGGCTGCAGCGGCCTGGAGCGCCTCTCTCCTGGCAAAGCTCAGCCGGTaGCGAGCCTTGCCCAGGATC +
Preference number: 4 (lower is better)
Translates to: CEEGAGLLAAAAWSASLLAKLSR*RALPRI
Trigger: GATCCTGGGCAAGGCTCGGCACCGGCTGAGCTTTGC...CAGGAGAGAGGCGCTCCAGGCCGCTGCAGCCAACAAACCGGCGCCCTCTTCACA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR GCA 90 bp CCGGGCACAGAGCTGCGGGGTCTGGGGGCACCGGGAGCTAAGAGCAGGCTCTGGATGGTGCGAATCTCCTaGAGCATCTCCGTGCTGGAG +
Preference number: 4 (lower is better)
Translates to: PGTELRGLGAPGAKSRLWMVRIS*SISVLE
Trigger: CTCCAGCACGGAGATGCTGCAGGAGATTCGCACCAT...CCAGAGCCTGCTCTTAGCTCCCGGTGCCCCCAGACCCCGCAGCTCTGTGCCCGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR GCA 90 bp CTGTGTCCTGGCCTTGCTCCGTGCTCTCCCGGGGCGTGTCCTCAGGGCCGTCTGACCTCCACACTCAGCTaGCGGGTCACCGTGATCTTG +
Preference number: 4 (lower is better)
Translates to: LCPGLAPCSPGACPQGRLTSTLS*RVTVIL
Trigger: CAAGATCACGGTGACCCGGCAGCTGAGTGTGGAGGT...CAGACGGCCCTGAGGACACGCCCCGGGAGAGCACGGAGCAAGGCCAGGACACAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555589.5
CDS-3UTR GCA 90 bp GGGCCCTTCCTCTGGTGTGGGGAGTCTCACTGCTCCCCTAAGGCAGGGCTGGGCTGTGGGGAGTCTCACTaGTCCCCTAAGGCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: GPFLWCGESHCSPKAGLGCGESH*SPKAGL
Trigger: CAGCCCTGCCTTAGGGGAGCAGTGAGACTCCCCACA...GCCCAGCCCTGCCTTAGGGGAGCAGTGAGACTCCCCACACCAGAGGAAGGGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000556418.1
CDS-3UTR GCA 90 bp CTGGGAGATGAATTAAGGCGCGTCTCGGAGTCCCTGCAAAGAGGAGCCGGCGCGCCAGCCCCTGCAGGGTaGTGGGTCCTAGGAGGGGCT +
Preference number: 4 (lower is better)
Translates to: LGDELRRVSESLQRGAGAPAPAG*WVLGGA
Trigger: AGCCCCTCCTAGGACCCAGCACCCTGCAGGGGCTGG...CGCGCCGGCTCCTCTTTGCAGGGACTCCGAGACGCGCCTTAATTCATCTCCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556418.1
CDS-3UTR CCA 90 bp CCGGGCACAGAGCTGCGGGGTCTGGGGGCACCGGGAGCTAAGAGCAGGCTCTGGGTTTTTCGGGTTGGCTaGCAGACAAAGCCGCATGCC +
Preference number: 4 (lower is better)
Translates to: PGTELRGLGAPGAKSRLWVFRVG*QTKPHA
Trigger: GGCATGCGGCTTTGTCTGCCAGCCAACCCGAAAAAC...CCAGAGCCTGCTCTTAGCTCCCGGTGCCCCCAGACCCCGCAGCTCTGTGCCCGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR CCA 90 bp GCACAGAGCTGCGGGGTCTGGGGGCACCGGGAGCTAAGAGCAGGCTCTGGTGCAGCCTCAAGGATGGCCTaGGGTAGCCGCAGTGTGAAG +
Preference number: 4 (lower is better)
Translates to: AQSCGVWGHRELRAGSGAASRMA*GSRSVK
Trigger: CTTCACACTGCGGCTACCCCAGGCCATCCTTGAGGC...TGCACCAGAGCCTGCTCTTAGCTCCCGGTGCCCCCAGACCCCGCAGCTCTGTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR CCA 90 bp AGCTGCTTCTTGCCGGGCACAGAGCTGCGGGGTCTGGGGGCACCGGGAGCTAAGGCCTCAAGGATGGCCTaGGGTAGCCGCAGTGTGAAG +
Preference number: 4 (lower is better)
Translates to: SCFLPGTELRGLGAPGAKASRMA*GSRSVK
Trigger: CTTCACACTGCGGCTACCCCAGGCCATCCTTGAGGC...CTTAGCTCCCGGTGCCCCCAGACCCCGCAGCTCTGTGCCCGGCAAGAAGCAGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR CCA 90 bp CCGGACTTTGGTCTTCTAAGGACACCCTCTCGGAAACGCGGCGTCTGGGAGGGGGAGGTGGCTGGTCGGTaGGCAGGGCGCTGCTGCAGT +
Preference number: 4 (lower is better)
Translates to: PDFGLLRTPSRKRGVWEGEVAGR*AGRCCS
Trigger: ACTGCAGCAGCGCCCTGCCCACCGACCAGCCACCTC...CCCCTCCCAGACGCCGCGTTTCCGAGAGGGTGTCCTTAGAAGACCAAAGTCCGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555589.5
CDS-3UTR CCA 90 bp ATGGGTCCGCGGAGCTGGCCGTGCTTGGCGCCCTGGCGTGTGTCTAGCTGCTTCGTCATCATGGGCGGCTaGTTCGGATGGTCTGGGGGA +
Preference number: 4 (lower is better)
Translates to: MGPRSWPCLAPWRVSSCFVIMGG*FGWSGG
Trigger: TCCCCCAGACCATCCGAACCAGCCGCCCATGATGAC...GAAGCAGCTAGACACACGCCAGGGCGCCAAGCACGGCCAGCTCCGCGGACCCAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000216487.12
CDS-3UTR CCA 90 bp GCACAGAGCTGCGGGGTCTGGGGGCACCGGGAGCTAAGAGCAGGCTCTGGTGCAACTGGAGGCTGCCCCTaGCTTCATCGCTTCCTCCCT +
Preference number: 4 (lower is better)
Translates to: AQSCGVWGHRELRAGSGATGGCP*LHRFLP
Trigger: AGGGAGGAAGCGATGAAGCCAGGGGCAGCCTCCAGT...TGCACCAGAGCCTGCTCTTAGCTCCCGGTGCCCCCAGACCCCGCAGCTCTGTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000216487.12
CDS-3UTR CCA 90 bp CCTCCCTGGATGGATAGCGGGTGGCGGGCGCCAAGCTGTCTGCGAGTCCGGCACGGAGCCCTTGAACTCTaGAGAGCTCTGGGAATGGGC +
Preference number: 4 (lower is better)
Translates to: PPWMDSGWRAPSCLRVRHGALEL*RALGMG
Trigger: GCCCATTCCCAGAGCTCTCCAGAGTTCAAGGGCTCC...GTGCCGGACTCGCAGACAGCTTGGCGCCCGCCACCCGCTATCCATCCAGGGAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556418.1
CDS-3UTR CCA 90 bp GAGGGGGCCCAGGCCTGCAGTGGGGCATGGGAGTCTCTCGCAGGTCATCATGGGCCTCCTCCGTGCTGCTaGTGGAGTAGGAGTCCTGGT +
Preference number: 4 (lower is better)
Translates to: EGAQACSGAWESLAGHHGPPPCC*WSRSPG
Trigger: ACCAGGACTCCTACTCCACCAGCAGCACGGAGGAGG...CCCATGATGACCTGCGAGAGACTCCCATGCCCCACTGCAGGCCTGGGCCCCCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000555589.5
CDS-3UTR CCA 90 bp TGGCACGGGGAGCAGCTGTGGCCGGTGCTCCTTCCTAGGCCAGTCCTGGGGAAATCCGTGCTGGAGGTCTaGCGCGCCATCATCTCCAGG +
Preference number: 4 (lower is better)
Translates to: WHGEQLWPVLLPRPVLGKSVLEV*RAIISR
Trigger: CCTGGAGATGATGGCGCGCCAGACCTCCAGCACGGA...TTTCCCCAGGACTGGCCTAGGAAGGAGCACCGGCCACAGCTGCTCCCCGTGCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR CCA 90 bp CAGGGCCCCGTAGGTGGTGGTCAGATAGTAGGAACCCTCCCCCAGCTGCAGGGCGCACCTCCGGCACGCTaGTGGTCACACCTAGGTCAG +
Preference number: 4 (lower is better)
Translates to: QGPVGGGQIVGTLPQLQGAPPAR*WSHLGQ
Trigger: CTGACCTAGGTGTGACCACCAGCGTGCCGGAGGTGC...GCCCTGCAGCTGGGGGAGGGTTCCTACTATCTGACCACCACCTACGGGGCCCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000555589.5
CDS-3UTR CCA 90 bp TGGCACGGGGAGCAGCTGTGGCCGGTGCTCCTTCCTAGGCCAGTCCTGGGGAAAGCTCCCAGCGGTGGATaGAGTCCTGCACCTCCACAC +
Preference number: 4 (lower is better)
Translates to: WHGEQLWPVLLPRPVLGKAPSGG*SPAPPH
Trigger: GTGTGGAGGTGCAGGACTCCATCCACCGCTGGGAGC...TTTCCCCAGGACTGGCCTAGGAAGGAGCACCGGCCACAGCTGCTCCCCGTGCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR CCA 90 bp ATTCTCCCCACACGATGGCTCCTGCAATCTGCCACAGCTCTGGGGCGTGTCCTGGCGTCGTCCGCCAGCTaGAAGCAGCGCCCGTCCACC +
Preference number: 4 (lower is better)
Translates to: ILPTRWLLQSATALGRVLASSAS*KQRPST
Trigger: GGTGGACGGGCGCTGCTTCCAGCTGGCGGACGACGC...CAGGACACGCCCCAGAGCTGTGGCAGATTGCAGGAGCCATCGTGTGGGGAGAAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR CCA 90 bp TGCCGGGCACAGAGCTGCGGGGTCTGGGGGCACCGGGAGCTAAGAGCAGGCTCTCTTGCCCTCAGGAAGTaGCCTTGGACGAGCGTCATG +
Preference number: 4 (lower is better)
Translates to: CRAQSCGVWGHRELRAGSLALRK*PWTSVM
Trigger: CATGACGCTCGTCCAAGGCCACTTCCTGAGGGCAAG...AGAGCCTGCTCTTAGCTCCCGGTGCCCCCAGACCCCGCAGCTCTGTGCCCGGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR CCA 90 bp GTCCGCGGAGCTGGCCGTGCTTGGCGCCCTGGCGTGTGTCTAGCTGCTTCTTGCTGCAAAGACCGAGGATaGGGTGGGTGTGGGGGACTC +
Preference number: 4 (lower is better)
Translates to: VRGAGRAWRPGVCLAASCCKDRG*GGCGGL
Trigger: GAGTCCCCCACACCCACCCCATCCTCGGTCTTTGCA...GCAAGAAGCAGCTAGACACACGCCAGGGCGCCAAGCACGGCCAGCTCCGCGGAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR CCA 90 bp ATGGGTCCGCGGAGCTGGCCGTGCTTGGCGCCCTGGCGTGTGTCTAGCTGCTTCGTGCTCCTGAGATGCTaGGTCCACCCTGAGTGGCAC +
Preference number: 4 (lower is better)
Translates to: MGPRSWPCLAPWRVSSCFVLLRC*VHPEWH
Trigger: GTGCCACTCAGGGTGGACCCAGCATCTCAGGAGCAC...GAAGCAGCTAGACACACGCCAGGGCGCCAAGCACGGCCAGCTCCGCGGACCCAT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR CCA 90 bp GGCACGTCATGGAATGGCCCATGTCCCTCTGCTGCGTGGACGTCGCGGTCGGGAGCTAAGAGCAGGCTCTaGTGCAGGGGTGGAGGCCTG +
Preference number: 4 (lower is better)
Translates to: GTSWNGPCPSAAWTSRSGAKSRL*CRGGGL
Trigger: CAGGCCTCCACCCCTGCACCAGAGCCTGCTCTTAGC...TCCCGACCGCGACGTCCACGCAGCAGAGGGACATGGGCCATTCCATGACGTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR CCA 90 bp GGAGCCGGCGCGTCCCCTGGCTGCTGGTCCACAGGCTCCCCATCATTCATTCATAGCAGGGATGGTGTCTaGGACATGGCCCCACCGGGC +
Preference number: 4 (lower is better)
Translates to: GAGASPGCWSTGSPSFIHSRDGV*DMAPPG
Trigger: GCCCGGTGGGGCCATGTCCCAGACACCATCCCTGCT...ATGAATGAATGATGGGGAGCCTGTGGACCAGCAGCCAGGGGACGCGCCGGCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000556418.1
CDS-3UTR CCA 90 bp TGGGAGGGGATGGGAACAGAGGTGTGCTGGAGCTGGCTCACACCCGCCAGGGAGTGGGCTGGGCATGTTTaGGGAACTGGGGGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: WEGMGTEVCWSWLTPAREWAGHV*GTGGSW
Trigger: CCAGCTGCCCCCAGTTCCCCAAACATGCCCAGCCCA...CTCCCTGGCGGGTGTGAGCCAGCTCCAGCACACCTCTGTTCCCATCCCCTCCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000556418.1
CDS-3UTR CCA 90 bp TCACACAGCAAGCTAGTACAGGGCTGGGGCCAGAACTCAAGCCTCCTGTCTCCCGCGACGCCTGCGGGCTaGGGCTGGGCACTCGCAGCA +
Preference number: 4 (lower is better)
Translates to: SHSKLVQGWGQNSSLLSPATPAG*GWALAA
Trigger: TGCTGCGAGTGCCCAGCCCCAGCCCGCAGGCGTCGC...GGGAGACAGGAGGCTTGAGTTCTGGCCCCAGCCCTGTACTAGCTTGCTGTGTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556418.1
CDS-3UTR CCA 90 bp GTGCTGGAGCTGGCTCACACCCGCCAGGGAGAGCCGACTGCATACACTTCTTTCAGGCCCCTCCCTGGATaGATAGCGGGTGGCGGGCGC +
Preference number: 4 (lower is better)
Translates to: VLELAHTRQGEPTAYTSFRPLPG*IAGGGR
Trigger: GCGCCCGCCACCCGCTATCCATCCAGGGAGGGGCCT...GAAAGAAGTGTATGCAGTCGGCTCTCCCTGGCGGGTGTGAGCCAGCTCCAGCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556418.1
CDS-3UTR TCA 90 bp GCTCCAGGGCCCCGTAGGTGGTGGTCAGATAGTAGGAACCCTCCCCCAGCTGCAGCTTCTCCAGGATGCTaGTGCCCCGGCGGTGAGGAA +
Preference number: 4 (lower is better)
Translates to: APGPRRWWSDSRNPPPAAASPGC*CPGGEE
Trigger: TTCCTCACCGCCGGGGCATCAGCATCCTGGAGAAGC...TGCAGCTGGGGGAGGGTTCCTACTATCTGACCACCACCTACGGGGCCCTGGAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000555589.5
CDS-3UTR TCA 90 bp AATGGCCCATGTCCCTCTGCTGCGTGGACGTCGCGGTCGGGAGTGCGCAGCCAGGGGGTAGCCGCAGTGTaGAGGGCAGTAAGTCTCTAC +
Preference number: 4 (lower is better)
Translates to: NGPCPSAAWTSRSGVRSQGVAAV*RAVSLY
Trigger: GTAGAGACTTACTGCCCTTCACACTGCGGCTACCCC...CTGGCTGCGCACTCCCGACCGCGACGTCCACGCAGCAGAGGGACATGGGCCATT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR TCA 90 bp GGTCCGCGGAGCTGGCCGTGCTTGGCGCCCTGGCGTGTGTCTAGCTGCTTCTTGTGGTCTCAAGGTCCGTaGAGCTGCTGGCCTCAAGGA +
Preference number: 4 (lower is better)
Translates to: GPRSWPCLAPWRVSSCFLWSQGP*SCWPQG
Trigger: TCCTTGAGGCCAGCAGCTTCACGGACCTTGAGACCA...CAAGAAGCAGCTAGACACACGCCAGGGCGCCAAGCACGGCCAGCTCCGCGGACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR TCA 90 bp GTCCTGGGGAAACTAAGCTCGGGCCCTTCTTTGCAAAGACCGAGGATGGGGTGGCTTGGGGAGGCAGGCTaGGCTGGTCCCCCTCTGCCG +
Preference number: 4 (lower is better)
Translates to: VLGKLSSGPSLQRPRMGWLGEAG*AGPPLP
Trigger: CGGCAGAGGGGGACCAGCTCAGCCTGCCTCCCCAAG...CCACCCCATCCTCGGTCTTTGCAAAGAAGGGCCCGAGCTTAGTTTCCCCAGGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR TCA 90 bp TCACAACTGTCCTGCGACGTTGGCCTGGGCACGTCATGGAATGGCCCATGTCCCCACCCCCAAGCTGTCTaGGAGGGAGGCCAGGGAGCC +
Preference number: 4 (lower is better)
Translates to: SQLSCDVGLGTSWNGPCPHPQAV*EGGQGA
Trigger: GGCTCCCTGGCCTCCCTCTCAGACAGCTTGGGGGTG...GGGACATGGGCCATTCCATGACGTGCCCAGGCCAACGTCGCAGGACAGTTGTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR TCA 90 bp TCATGGAATGGCCCATGTCCCTCTGCTGCGTGGACGTCGCGGTCGGGAGTGCGCGCAGGGCGGGGTCCATaGGCTCCATCATGTACTCCA +
Preference number: 4 (lower is better)
Translates to: SWNGPCPSAAWTSRSGVRAGRGP*APSCTP
Trigger: TGGAGTACATGATGGAGCTCATGGACCCCGCCCTGC...GCGCACTCCCGACCGCGACGTCCACGCAGCAGAGGGACATGGGCCATTCCATGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR TCA 90 bp GTCCGCGGAGCTGGCCGTGCTTGGCGCCCTGGCGTGTGTCTAGCTGCTTCTTGCTCTTGTCGTAGCTCTTaGTGTGCTCCAGGGCCCCGT +
Preference number: 4 (lower is better)
Translates to: VRGAGRAWRPGVCLAASCSCRSS*CAPGPR
Trigger: ACGGGGCCCTGGAGCACATCAAGAGCTACGACAAGA...GCAAGAAGCAGCTAGACACACGCCAGGGCGCCAAGCACGGCCAGCTCCGCGGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR TCA 90 bp CCCGGGCATCCCATAGTGCGGGCGGGCAACACAGTCCAGCCCCTTAGGGCTGCATCTTGTCGTAGCTCTTaGTGTGCTCCAGGGCCCCGT +
Preference number: 4 (lower is better)
Translates to: PGHPIVRAGNTVQPLRAASCRSS*CAPGPR
Trigger: ACGGGGCCCTGGAGCACATCAAGAGCTACGACAAGA...TGCAGCCCTAAGGGGCTGGACTGTGTTGCCCGCCCGCACTATGGGATGCCCGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556418.1
CDS-3UTR GCA 90 bp TGTGAAGAGGGCGCCGGTTTGTTGGCTGCAGCGGCCTGGAGCGCCTCTCTCCTGTGGCCCAGACTCAGCTaGAGCCACACCGGGCATGTT +
Preference number: 4 (lower is better)
Translates to: CEEGAGLLAAAAWSASLLWPRLS*SHTGHV
Trigger: AACATGCCCGGTGTGGCTGCAGCTGAGTCTGGGCCA...CAGGAGAGAGGCGCTCCAGGCCGCTGCAGCCAACAAACCGGCGCCCTCTTCACA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR GCA 90 bp GGCACGTCATGGAATGGCCCATGTCCCTCTGCTGCGTGGACGTCGCGGTCGGGAACACAGAGCACCAGCTaGTTCGAGCTGCTGTCCCGG +
Preference number: 4 (lower is better)
Translates to: GTSWNGPCPSAAWTSRSGTQSTS*FELLSR
Trigger: CCGGGACAGCAGCTCGAAGCAGCTGGTGCTCTGTGT...TCCCGACCGCGACGTCCACGCAGCAGAGGGACATGGGCCATTCCATGACGTGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR GCA 90 bp GGAGCTGGCCGTGCTTGGCGCCCTGGCGTGTGTCTAGCTGCTTCTTGCCGGGCATGGGCAGCTCTGGCATaGTGTGAGGATCGCTGGCTT +
Preference number: 4 (lower is better)
Translates to: GAGRAWRPGVCLAASCRAWAALA*CEDRWL
Trigger: AAGCCAGCGATCCTCACAGCATGCCAGAGCTGCCCA...TGCCCGGCAAGAAGCAGCTAGACACACGCCAGGGCGCCAAGCACGGCCAGCTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR GCA 90 bp AGGTGGGCGGCAAAGGGCGTGCAGGGCAATTTCCAAGAGGTGGCTGGTCGGTGGGCAAAGCTCAGCCGGTaGCGAGCCTTGCCCAGGATC +
Preference number: 4 (lower is better)
Translates to: RWAAKGVQGNFQEVAGRWAKLSR*RALPRI
Trigger: GATCCTGGGCAAGGCTCGGCACCGGCTGAGCTTTGC...CCACCGACCAGCCACCTCTTGGAAATTGCCCTGCACGCCCTTTGCCGCCCACCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555589.5
CDS-3UTR GCA 90 bp TCACAACTGTCCTGCGACGTTGGCCTGGGCACGTCATGGAATGGCCCATGTCCCAGCTCCTCCTCGGAGTaGAGGGCGGGGTCCACCAGG +
Preference number: 4 (lower is better)
Translates to: SQLSCDVGLGTSWNGPCPSSSSE*RAGSTR
Trigger: CCTGGTGGACCCCGCCCTGCACTCCGAGGAGGAGCT...GGGACATGGGCCATTCCATGACGTGCCCAGGCCAACGTCGCAGGACAGTTGTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR GCA 90 bp GATAGCGGGTGGCGGGCGCCAAGCTGTCTGCGAGTCCGGCACCTGCGCCTTTCCGCAGCGAACCATCCTTaGTGTGGATCTGATGCAGGC +
Preference number: 4 (lower is better)
Translates to: DSGWRAPSCLRVRHLRLSAANHP*CGSDAG
Trigger: GCCTGCATCAGATCCACAGCAAGGATGGTTCGCTGC...GGAAAGGCGCAGGTGCCGGACTCGCAGACAGCTTGGCGCCCGCCACCCGCTATC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556418.1
CDS-3UTR GCA 90 bp GGAGCCGGCGCGTCCCCTGGCTGCTGGTCCACAGGCTCCCCATCATTCATTCATAGGGCTTCCCTGGGTTaGCGAGGGCCATGGAGTCGT +
Preference number: 4 (lower is better)
Translates to: GAGASPGCWSTGSPSFIHRASLG*RGPWSR
Trigger: ACGACTCCATGGCCCTCGGCAACCCAGGGAAGCCCT...ATGAATGAATGATGGGGAGCCTGTGGACCAGCAGCCAGGGGACGCGCCGGCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556418.1
CDS-3UTR GCA 90 bp TCACAACTGTCCTGCGACGTTGGCCTGGGCACGTCATGGAATGGCCCATGTCCCGAACCCTCCCCCAGCTaGAGGGCGGGGTCCATGAGC +
Preference number: 4 (lower is better)
Translates to: SQLSCDVGLGTSWNGPCPEPSPS*RAGSMS
Trigger: GCTCATGGACCCCGCCCTGCAGCTGGGGGAGGGTTC...GGGACATGGGCCATTCCATGACGTGCCCAGGCCAACGTCGCAGGACAGTTGTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR GCA 90 bp GCTCCTGCAATCTGCCACAGCTCTGGGGCGTGTCCTGTAGGGAAAGGCCCTGTTAGCGTCCGCGCCTGCTaGTCGGGCTCCAGGTACGAC +
Preference number: 4 (lower is better)
Translates to: APAICHSSGACPVGKGPVSVRAC*SGSRYD
Trigger: GTCGTACCTGGAGCCCGAGCAGCAGGCGCGGACGCT...AACAGGGCCTTTCCCTACAGGACACGCCCCAGAGCTGTGGCAGATTGCAGGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR GCA 90 bp CGTCTCGGTGTCTCAGGGCTATTAGGACTTGCCCTCAGGAAGTGGCCTTGGACGAACAGCCGGTGCGCCTaGGGCCGCTCCACCGCGAAC +
Preference number: 4 (lower is better)
Translates to: RLGVSGLLGLALRKWPWTNSRCA*GRSTAN
Trigger: GTTCGCGGTGGAGCGGCCGCAGGCGCACCGGCTGTT...CGTCCAAGGCCACTTCCTGAGGGCAAGTCCTAATAGCCCTGAGACACCGAGACG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR GCA 90 bp AACTGTCCTGCGACGTTGGCCTGGGCACGTCATGGAATGGCCCATGTCCCTCTGCCCATGTCCCTCTGCTaGGTGGACGTCGCGGTCGGG +
Preference number: 4 (lower is better)
Translates to: NCPATLAWARHGMAHVPLPMSLC*VDVAVG
Trigger: CCCGACCGCGACGTCCACGCAGCAGAGGGACATGGG...CAGAGGGACATGGGCCATTCCATGACGTGCCCAGGCCAACGTCGCAGGACAGTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR GCA 90 bp GGGGAGCAGCTGTGGCCGGTGCTCCTTCCTAGGCCAGTCCTGGGGAAACTAAGCAGCAGCTGTGGCCGGTaGTCCTTCCTAGGCCAGTCC +
Preference number: 4 (lower is better)
Translates to: GEQLWPVLLPRPVLGKLSSSCGR*SFLGQS
Trigger: GGACTGGCCTAGGAAGGAGCACCGGCCACAGCTGCT...GCTTAGTTTCCCCAGGACTGGCCTAGGAAGGAGCACCGGCCACAGCTGCTCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR GCA 90 bp CGACACCCTGAGGTGCTCCTGAGATGCTGGGTCCACCCTGAGTGGCACGGGGAGTGTCTAGCTGCTTCTTaGCGGGCACAGAGCTGCGGG +
Preference number: 4 (lower is better)
Translates to: RHPEVLLRCWVHPEWHGECLAAS*RAQSCG
Trigger: CCCGCAGCTCTGTGCCCGGCAAGAAGCAGCTAGACA...CTCCCCGTGCCACTCAGGGTGGACCCAGCATCTCAGGAGCACCTCAGGGTGTCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR GCA 90 bp GGTCCGCGGAGCTGGCCGTGCTTGGCGCCCTGGCGTGTGTCTAGCTGCTTCTTGATGGCTCCTGCAATCTaGCACAGCTCTGGGGCGTGT +
Preference number: 4 (lower is better)
Translates to: GPRSWPCLAPWRVSSCFLMAPAI*HSSGAC
Trigger: ACACGCCCCAGAGCTGTGGCAGATTGCAGGAGCCAT...CAAGAAGCAGCTAGACACACGCCAGGGCGCCAAGCACGGCCAGCTCCGCGGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR GCA 90 bp CTTTGCTCCCACTGCCTGTGTGGCCTTGATTCGTCGAGCCCCGGCTGTAAAGTGTGCAGGCAGAGAGGCTaGGCGCGGGGCTGCCCCCTT +
Preference number: 4 (lower is better)
Translates to: LCSHCLCGLDSSSPGCKVCRQRG*ARGCPL
Trigger: AAGGGGGCAGCCCCGCGCGCAGCCTCTCTGCCTGCA...CACTTTACAGCCGGGGCTCGACGAATCAAGGCCACACAGGCAGTGGGAGCAAAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000556418.1
CDS-3UTR GCA 90 bp AAGGGAGGTGCGAGCCCGCCCGGGCATCCCATAGTGCGGGCGGGCAACACAGTCTGCCTTTGCTCCCACTaGCTGTGTGGCCTTGATTCG +
Preference number: 4 (lower is better)
Translates to: KGGASPPGHPIVRAGNTVCLCSH*LCGLDS
Trigger: CGAATCAAGGCCACACAGGCAGTGGGAGCAAAGGCA...GACTGTGTTGCCCGCCCGCACTATGGGATGCCCGGGCGGGCTCGCACCTCCCTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556418.1
CDS-3UTR GCA 90 bp CTTTGCTCCCACTGCCTGTGTGGCCTTGATTCGTCGAGCCCCGGCTGTAAAGTGGGCGCGTCCCCTGGCTaGTGGTCCACAGGCTCCCCA +
Preference number: 4 (lower is better)
Translates to: LCSHCLCGLDSSSPGCKVGASPG*WSTGSP
Trigger: TGGGGAGCCTGTGGACCAGCAGCCAGGGGACGCGCC...CACTTTACAGCCGGGGCTCGACGAATCAAGGCCACACAGGCAGTGGGAGCAAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000556418.1
CDS-3UTR GCA 90 bp CGAGGCCGGGCTCCTGTCAAGAGCTTCACGGGGACCGCCCATTTCTTCCAGGAGACGCAGATGAAGTCCTaGGGAGACGCGAGGGGCCTG +
Preference number: 4 (lower is better)
Translates to: RGRAPVKSFTGTAHFFQETQMKS*GDARGL
Trigger: CAGGCCCCTCGCGTCTCCGCAGGACTTCATCTGCGT...CTCCTGGAAGAAATGGGCGGTCCCCGTGAAGCTCTTGACAGGAGCCCGGCCTCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556418.1
CDS-3UTR CCA 90 bp TGCAGGGGTGGAGGCCTGTCTCTTAACCGACACCCTGAGGTGCTCCTGAGATGCGCGCCCGCATGTCCCTaGCTCTGGCCCTCTGGAAGG +
Preference number: 4 (lower is better)
Translates to: CRGGGLSLNRHPEVLLRCAPACP*LWPSGR
Trigger: CCTTCCAGAGGGCCAGAGCCAGGGACATGCGGGCGC...GCATCTCAGGAGCACCTCAGGGTGTCGGTTAAGAGACAGGCCTCCACCCCTGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR CCA 90 bp CGTGAGGTTGCTGCGGGCCAGCACATACATGAGCACAGGCAGGAAGTCATCCGCGCGCCCGCATGTCCCTaGCTCTGGCCCTCTGGAAGG +
Preference number: 4 (lower is better)
Translates to: REVAAGQHIHEHRQEVIRAPACP*LWPSGR
Trigger: CCTTCCAGAGGGCCAGAGCCAGGGACATGCGGGCGC...GCGGATGACTTCCTGCCTGTGCTCATGTATGTGCTGGCCCGCAGCAACCTCACG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555589.5
CDS-3UTR CCA 90 bp AACTGTCCTGCGACGTTGGCCTGGGCACGTCATGGAATGGCCCATGTCCCTCTGCCCGGTGCAGGATCCTaGCCACCTCTGCCTGGCCCA +
Preference number: 4 (lower is better)
Translates to: NCPATLAWARHGMAHVPLPGAGS*PPLPGP
Trigger: TGGGCCAGGCAGAGGTGGCCAGGATCCTGCACCGGG...CAGAGGGACATGGGCCATTCCATGACGTGCCCAGGCCAACGTCGCAGGACAGTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR CCA 90 bp ATTCTCCCCACACGATGGCTCCTGCAATCTGCCACAGCTCTGGGGCGTGTCCTGGAGGTGGCTGGTCGGTaGGCAGGGCGCTGCTGCAGT +
Preference number: 4 (lower is better)
Translates to: ILPTRWLLQSATALGRVLEVAGR*AGRCCS
Trigger: ACTGCAGCAGCGCCCTGCCCACCGACCAGCCACCTC...CAGGACACGCCCCAGAGCTGTGGCAGATTGCAGGAGCCATCGTGTGGGGAGAAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR CCA 90 bp CGAGCCTTGCCCAGGATCATGGAGGGCTTCTTCTTCACGCTGGGGCTGCTGAACGGCGTGGGGCCCACCTaGAGGTGGGTGAGGTGGCAT +
Preference number: 4 (lower is better)
Translates to: RALPRIMEGFFFTLGLLNGVGPT*RWVRWH
Trigger: ATGCCACCTCACCCACCTCCAGGTGGGCCCCACGCC...GTTCAGCAGCCCCAGCGTGAAGAAGAAGCCCTCCATGATCCTGGGCAAGGCTCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555589.5
CDS-3UTR CCA 90 bp ATTCTCCCCACACGATGGCTCCTGCAATCTGCCACAGCTCTGGGGCGTGTCCTGGGCGTGGGGCCCACCTaGAGGTGGGTGAGGTGGCAT +
Preference number: 4 (lower is better)
Translates to: ILPTRWLLQSATALGRVLGVGPT*RWVRWH
Trigger: ATGCCACCTCACCCACCTCCAGGTGGGCCCCACGCC...CAGGACACGCCCCAGAGCTGTGGCAGATTGCAGGAGCCATCGTGTGGGGAGAAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR CCA 90 bp GCTCCTGCAATCTGCCACAGCTCTGGGGCGTGTCCTGTAGGGAAAGGCCCTGTTGGAGGCAGGCTGAGCTaGTCCCCCTCTGCCGCCATC +
Preference number: 4 (lower is better)
Translates to: APAICHSSGACPVGKGPVGGRLS*SPSAAI
Trigger: GATGGCGGCAGAGGGGGACCAGCTCAGCCTGCCTCC...AACAGGGCCTTTCCCTACAGGACACGCCCCAGAGCTGTGGCAGATTGCAGGAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR CCA 90 bp GGTGGCATCAGAGGTGGGCGGCAAAGGGCGTGCAGGGCAATTTCCAAGAGGTGGTTGGCCCTCTCTGGGTaGACCCGGCGTGGGTGTCTC +
Preference number: 4 (lower is better)
Translates to: GGIRGGRQRACRAISKRWLALSG*TRRGCL
Trigger: GAGACACCCACGCCGGGTCCACCCAGAGAGGGCCAA...CCACCTCTTGGAAATTGCCCTGCACGCCCTTTGCCGCCCACCTCTGATGCCACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555589.5
CDS-3UTR CCA 90 bp CCCGGGCATCCCATAGTGCGGGCGGGCAACACAGTCCAGCCCCTTAGGGCTGCAAACTCTGGAGAGCTCTaGGAATGGGCAGTGGCCTGG +
Preference number: 4 (lower is better)
Translates to: PGHPIVRAGNTVQPLRAANSGEL*EWAVAW
Trigger: CCAGGCCACTGCCCATTCCCAGAGCTCTCCAGAGTT...TGCAGCCCTAAGGGGCTGGACTGTGTTGCCCGCCCGCACTATGGGATGCCCGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556418.1
CDS-3UTR CCA 90 bp CCTGCACCCCAGGCGCAATGCTGGGCACGGAGGGCAGCACAGATAAGAAGGGAGCCTCCGTGCTGCTGGTaGAGTAGGAGTCCTGGTCGG +
Preference number: 4 (lower is better)
Translates to: PAPQAQCWARRAAQIRREPPCCW*SRSPGR
Trigger: CCGACCAGGACTCCTACTCCACCAGCAGCACGGAGG...CTCCCTTCTTATCTGTGCTGCCCTCCGTGCCCAGCATTGCGCCTGGGGTGCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556418.1
CDS-3UTR CCA 90 bp GTCCTGTACGGAGGAGCGGGAGGCCCGGGCCTTGTTGAGAGTACGCCGGCGCTCTCACACCTAGGTCAGTaGTGGTGGTGGCCAGGATCA +
Preference number: 4 (lower is better)
Translates to: VLYGGAGGPGLVESTPALSHLGQ*WWWPGS
Trigger: TGATCCTGGCCACCACCACCACTGACCTAGGTGTGA...GAGCGCCGGCGTACTCTCAACAAGGCCCGGGCCTCCCGCTCCTCCGTACAGGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555589.5
CDS-3UTR CCA 90 bp AGCTGCTTCTTGCCGGGCACAGAGCTGCGGGGTCTGGGGGCACCGGGAGCTAAGGGGCCCCGTAGGTGGTaGTCAGATAGTAGGAACCCT +
Preference number: 4 (lower is better)
Translates to: SCFLPGTELRGLGAPGAKGPRRW*SDSRNP
Trigger: AGGGTTCCTACTATCTGACCACCACCTACGGGGCCC...CTTAGCTCCCGGTGCCCCCAGACCCCGCAGCTCTGTGCCCGGCAAGAAGCAGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR CCA 90 bp ATGGGTCCGCGGAGCTGGCCGTGCTTGGCGCCCTGGCGTGTGTCTAGCTGCTTCCCAGGGCCCCGTAGGTaGTGGTCAGATAGTAGGAAC +
Preference number: 4 (lower is better)
Translates to: MGPRSWPCLAPWRVSSCFPGPRR*WSDSRN
Trigger: GTTCCTACTATCTGACCACCACCTACGGGGCCCTGG...GAAGCAGCTAGACACACGCCAGGGCGCCAAGCACGGCCAGCTCCGCGGACCCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR CCA 90 bp TCCCTCCAGGTGAGTTCCCTGCACCCCAGGCGCAATGCTGGGCACGGAGGGCAGCCAGGGCCCCGTAGGTaGTGGTCAGATAGTAGGAAC +
Preference number: 4 (lower is better)
Translates to: SLQVSSLHPRRNAGHGGQPGPRR*WSDSRN
Trigger: GTTCCTACTATCTGACCACCACCTACGGGGCCCTGG...CTGCCCTCCGTGCCCAGCATTGCGCCTGGGGTGCAGGGAACTCACCTGGAGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556418.1
CDS-3UTR CCA 90 bp TGGGTCCGCGGAGCTGGCCGTGCTTGGCGCCCTGGCGTGTGTCTAGCTGCTTCTCCAGGGCCCCGTAGGTaGTGGTCAGATAGTAGGAAC +
Preference number: 4 (lower is better)
Translates to: WVRGAGRAWRPGVCLAASPGPRR*WSDSRN
Trigger: GTTCCTACTATCTGACCACCACCTACGGGGCCCTGG...AGAAGCAGCTAGACACACGCCAGGGCGCCAAGCACGGCCAGCTCCGCGGACCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR CCA 90 bp AACTGTCCTGCGACGTTGGCCTGGGCACGTCATGGAATGGCCCATGTCCCTCTGCGGCGCTCCCAGCGGTaGATGGAGTCCTGCACCTCC +
Preference number: 4 (lower is better)
Translates to: NCPATLAWARHGMAHVPLRRSQR*MESCTS
Trigger: GGAGGTGCAGGACTCCATCCACCGCTGGGAGCGCCG...CAGAGGGACATGGGCCATTCCATGACGTGCCCAGGCCAACGTCGCAGGACAGTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR CCA 90 bp TGGCACGGGGAGCAGCTGTGGCCGGTGCTCCTTCCTAGGCCAGTCCTGGGGAAAGTGCTCCTGAGATGCTaGGTCCACCCTGAGTGGCAC +
Preference number: 4 (lower is better)
Translates to: WHGEQLWPVLLPRPVLGKVLLRC*VHPEWH
Trigger: GTGCCACTCAGGGTGGACCCAGCATCTCAGGAGCAC...TTTCCCCAGGACTGGCCTAGGAAGGAGCACCGGCCACAGCTGCTCCCCGTGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR CCA 90 bp CGTCTCGGTGTCTCAGGGCTATTAGGACTTGCCCTCAGGAAGTGGCCTTGGACGATGGGTCCGCGGAGCTaGCCGTGCTTGGCGCCCTGG +
Preference number: 4 (lower is better)
Translates to: RLGVSGLLGLALRKWPWTMGPRS*PCLAPW
Trigger: CCAGGGCGCCAAGCACGGCCAGCTCCGCGGACCCAT...CGTCCAAGGCCACTTCCTGAGGGCAAGTCCTAATAGCCCTGAGACACCGAGACG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR CCA 90 bp GGAGCCGGCGCGTCCCCTGGCTGCTGGTCCACAGGCTCCCCATCATTCATTCATGGGCCACTGGGTTGGTaGGGGTTACGCAGACCCTTG +
Preference number: 4 (lower is better)
Translates to: GAGASPGCWSTGSPSFIHGPLGW*GLRRPL
Trigger: CAAGGGTCTGCGTAACCCCCACCAACCCAGTGGCCC...ATGAATGAATGATGGGGAGCCTGTGGACCAGCAGCCAGGGGACGCGCCGGCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000556418.1
CDS-3UTR CCA 90 bp GCAGCCAGTGAACTGGGCTGGGCATGTTTGGGGAACTGGGGGCAGCTGGATTTGCCCCAGGCGCAATGCTaGGCACGGAGGGCAGCACAG +
Preference number: 4 (lower is better)
Translates to: AASELGWACLGNWGQLDLPQAQC*ARRAAQ
Trigger: CTGTGCTGCCCTCCGTGCCCAGCATTGCGCCTGGGG...CAAATCCAGCTGCCCCCAGTTCCCCAAACATGCCCAGCCCAGTTCACTGGCTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000556418.1
CDS-3UTR CCA 90 bp CCTGCACCCCAGGCGCAATGCTGGGCACGGAGGGCAGCACAGATAAGAAGGGAGGCCTGGCTTCCCAGCTaGGCCGACAGTTCTGGGAGA +
Preference number: 4 (lower is better)
Translates to: PAPQAQCWARRAAQIRREAWLPS*ADSSGR
Trigger: TCTCCCAGAACTGTCGGCCCAGCTGGGAAGCCAGGC...CTCCCTTCTTATCTGTGCTGCCCTCCGTGCCCAGCATTGCGCCTGGGGTGCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556418.1
CDS-3UTR TCA 90 bp GGGCCCTTCCTCTGGTGTGGGGAGTCTCACTGCTCCCCTAAGGCAGGGCTGGGCGGGCCAGCACATACATaGGCACAGGCAGGAAGTCAT +
Preference number: 4 (lower is better)
Translates to: GPFLWCGESHCSPKAGLGGPAHT*AQAGSH
Trigger: ATGACTTCCTGCCTGTGCTCATGTATGTGCTGGCCC...GCCCAGCCCTGCCTTAGGGGAGCAGTGAGACTCCCCACACCAGAGGAAGGGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556418.1
CDS-3UTR TCA 90 bp GAGAGGAAAGCGTGGAACATGCTGCTGAAACTGGCAAAGCTCAGCCGGTGCCGAAGGCCCGGGCCTTGTTaGGAGTACGCCGGCGCTCCC +
Preference number: 4 (lower is better)
Translates to: ERKAWNMLLKLAKLSRCRRPGPC*EYAGAP
Trigger: GGGAGCGCCGGCGTACTCTCAACAAGGCCCGGGCCT...TCGGCACCGGCTGAGCTTTGCCAGTTTCAGCAGCATGTTCCACGCTTTCCTCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555589.5
CDS-3UTR TCA 90 bp CGACACCCTGAGGTGCTCCTGAGATGCTGGGTCCACCCTGAGTGGCACGGGGAGGGTACGACACGCAGATaGAGTCCTGTACGGAGGAGC +
Preference number: 4 (lower is better)
Translates to: RHPEVLLRCWVHPEWHGEGTTRR*SPVRRS
Trigger: GCTCCTCCGTACAGGACTTCATCTGCGTGTCGTACC...CTCCCCGTGCCACTCAGGGTGGACCCAGCATCTCAGGAGCACCTCAGGGTGTCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR TCA 90 bp CCTGCACCCCAGGCGCAATGCTGGGCACGGAGGGCAGCACAGATAAGAAGGGAGGGTACGACACGCAGATaGAGTCCTGCGGAGACGCGA +
Preference number: 4 (lower is better)
Translates to: PAPQAQCWARRAAQIRREGTTRR*SPAETR
Trigger: TCGCGTCTCCGCAGGACTTCATCTGCGTGTCGTACC...CTCCCTTCTTATCTGTGCTGCCCTCCGTGCCCAGCATTGCGCCTGGGGTGCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556418.1
CDS-3UTR GCA 90 bp GGGGAGCAGCTGTGGCCGGTGCTCCTTCCTAGGCCAGTCCTGGGGAAACTAAGCACACAGAGCACCAGCTaGTTCGAGCTGCTGTCCCGG +
Preference number: 4 (lower is better)
Translates to: GEQLWPVLLPRPVLGKLSTQSTS*FELLSR
Trigger: CCGGGACAGCAGCTCGAAGCAGCTGGTGCTCTGTGT...GCTTAGTTTCCCCAGGACTGGCCTAGGAAGGAGCACCGGCCACAGCTGCTCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR GCA 90 bp GGAGCTGGCCGTGCTTGGCGCCCTGGCGTGTGTCTAGCTGCTTCTTGCCGGGCATTCACAGGCACAGTTTaGGTCATGGGCTGTGGGCCT +
Preference number: 4 (lower is better)
Translates to: GAGRAWRPGVCLAASCRAFTGTV*VMGCGP
Trigger: AGGCCCACAGCCCATGACGCAAACTGTGCCTGTGAA...TGCCCGGCAAGAAGCAGCTAGACACACGCCAGGGCGCCAAGCACGGCCAGCTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR GCA 90 bp ATTCTCCCCACACGATGGCTCCTGCAATCTGCCACAGCTCTGGGGCGTGTCCTGTCTGTGTCCTGGCCTTaGTCCGTGCTCTCCCGGGGC +
Preference number: 4 (lower is better)
Translates to: ILPTRWLLQSATALGRVLSVSWP*SVLSRG
Trigger: GCCCCGGGAGAGCACGGAGCAAGGCCAGGACACAGA...CAGGACACGCCCCAGAGCTGTGGCAGATTGCAGGAGCCATCGTGTGGGGAGAAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR GCA 90 bp ATGGGTCCGCGGAGCTGGCCGTGCTTGGCGCCCTGGCGTGTGTCTAGCTGCTTCAGTCCTGCACCAGGCTaGCAAAGTACGAGCCCTTGT +
Preference number: 4 (lower is better)
Translates to: MGPRSWPCLAPWRVSSCFSPAPG*QSTSPC
Trigger: ACAAGGGCTCGTACTTTGGCAGCCTGGTGCAGGACT...GAAGCAGCTAGACACACGCCAGGGCGCCAAGCACGGCCAGCTCCGCGGACCCAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR GCA 90 bp TCACACAGCAAGCTAGTACAGGGCTGGGGCCAGAACTCAAGCCTCCTGTCTCCCAGCTCCTCCTCGGAGTaGAGGGCGGGGTCCACCAGG +
Preference number: 4 (lower is better)
Translates to: SHSKLVQGWGQNSSLLSPSSSSE*RAGSTR
Trigger: CCTGGTGGACCCCGCCCTGCACTCCGAGGAGGAGCT...GGGAGACAGGAGGCTTGAGTTCTGGCCCCAGCCCTGTACTAGCTTGCTGTGTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556418.1
CDS-3UTR GCA 90 bp GAGGGGGCCCAGGCCTGCAGTGGGGCATGGGAGTCTCTCGCAGGTCATCATGGGGCAGCGAACCATCCTTaGTGTGGATCTGATGCAGGC +
Preference number: 4 (lower is better)
Translates to: EGAQACSGAWESLAGHHGAANHP*CGSDAG
Trigger: GCCTGCATCAGATCCACAGCAAGGATGGTTCGCTGC...CCCATGATGACCTGCGAGAGACTCCCATGCCCCACTGCAGGCCTGGGCCCCCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000555589.5
CDS-3UTR GCA 90 bp GATAGCGGGTGGCGGGCGCCAAGCTGTCTGCGAGTCCGGCACCTGCGCCTTTCCTTCTCCTTGAGCTGCTaGAGCGAACCATCCTTGCTG +
Preference number: 4 (lower is better)
Translates to: DSGWRAPSCLRVRHLRLSFSLSC*SEPSLL
Trigger: CAGCAAGGATGGTTCGCTGCAGCAGCTCAAGGAGAA...GGAAAGGCGCAGGTGCCGGACTCGCAGACAGCTTGGCGCCCGCCACCCGCTATC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556418.1
CDS-3UTR GCA 90 bp GATAGCGGGTGGCGGGCGCCAAGCTGTCTGCGAGTCCGGCACCTGCGCCTTTCCTGGTTCTCCTTGAGCTaGTGCAGCGAACCATCCTTG +
Preference number: 4 (lower is better)
Translates to: DSGWRAPSCLRVRHLRLSWFSLS*CSEPSL
Trigger: CAAGGATGGTTCGCTGCAGCAGCTCAAGGAGAACCA...GGAAAGGCGCAGGTGCCGGACTCGCAGACAGCTTGGCGCCCGCCACCCGCTATC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556418.1
CDS-3UTR GCA 90 bp CGTCTCGGTGTCTCAGGGCTATTAGGACTTGCCCTCAGGAAGTGGCCTTGGACGGAACCCTCCCCCAGCTaGAGGGCGGGGTCCATGAGC +
Preference number: 4 (lower is better)
Translates to: RLGVSGLLGLALRKWPWTEPSPS*RAGSMS
Trigger: GCTCATGGACCCCGCCCTGCAGCTGGGGGAGGGTTC...CGTCCAAGGCCACTTCCTGAGGGCAAGTCCTAATAGCCCTGAGACACCGAGACG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR GCA 90 bp GTACGAGCCCTTGTCCTGCGCCAGCTCCACCACCTTCTTGTACAGCTTGCGGTTGAACCCTCCCCCAGCTaGAGGGCGGGGTCCATGAGC +
Preference number: 4 (lower is better)
Translates to: VRALVLRQLHHLLVQLAVEPSPS*RAGSMS
Trigger: GCTCATGGACCCCGCCCTGCAGCTGGGGGAGGGTTC...AACCGCAAGCTGTACAAGAAGGTGGTGGAGCTGGCGCAGGACAAGGGCTCGTAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000555589.5
CDS-3UTR GCA 90 bp CCGTCTCGGTGTCTCAGGGCTATTAGGACTTGCCCTCAGGAAGTGGCCTTGGACAACTTCTCCGCGCACTaGGCGCACAGCGCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: PSRCLRAIRTCPQEVALDNFSAH*AHSAWA
Trigger: GGCCCAGGCGCTGTGCGCGCAGTGCGCGGAGAAGTT...GTCCAAGGCCACTTCCTGAGGGCAAGTCCTAATAGCCCTGAGACACCGAGACGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR GCA 90 bp TGTGAAGAGGGCGCCGGTTTGTTGGCTGCAGCGGCCTGGAGCGCCTCTCTCCTGATGGCTCCTGCAATCTaGCACAGCTCTGGGGCGTGT +
Preference number: 4 (lower is better)
Translates to: CEEGAGLLAAAAWSASLLMAPAI*HSSGAC
Trigger: ACACGCCCCAGAGCTGTGGCAGATTGCAGGAGCCAT...CAGGAGAGAGGCGCTCCAGGCCGCTGCAGCCAACAAACCGGCGCCCTCTTCACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR GCA 90 bp TCCCTCCAGGTGAGTTCCCTGCACCCCAGGCGCAATGCTGGGCACGGAGGGCAGTGCACCCTTCCTGCTTaGCCAGGGAGAACACCAATG +
Preference number: 4 (lower is better)
Translates to: SLQVSSLHPRRNAGHGGQCTLPA*PGRTPM
Trigger: CATTGGTGTTCTCCCTGGGCAAGCAGGAAGGGTGCA...CTGCCCTCCGTGCCCAGCATTGCGCCTGGGGTGCAGGGAACTCACCTGGAGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556418.1
CDS-3UTR CCA 90 bp TGTGAAGAGGGCGCCGGTTTGTTGGCTGCAGCGGCCTGGAGCGCCTCTCTCCTGTCCTTTGCCAACAACTaGAACCGGACCCGTGGGGTC +
Preference number: 4 (lower is better)
Translates to: CEEGAGLLAAAAWSASLLSFANN*NRTRGV
Trigger: GACCCCACGGGTCCGGTTCCAGTTGTTGGCAAAGGA...CAGGAGAGAGGCGCTCCAGGCCGCTGCAGCCAACAAACCGGCGCCCTCTTCACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR CCA 90 bp AGCTGCTTCTTGCCGGGCACAGAGCTGCGGGGTCTGGGGGCACCGGGAGCTAAGGTTTTTCGGGTTGGCTaGCAGACAAAGCCGCATGCC +
Preference number: 4 (lower is better)
Translates to: SCFLPGTELRGLGAPGAKVFRVG*QTKPHA
Trigger: GGCATGCGGCTTTGTCTGCCAGCCAACCCGAAAAAC...CTTAGCTCCCGGTGCCCCCAGACCCCGCAGCTCTGTGCCCGGCAAGAAGCAGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR CCA 90 bp CCGTCTCGGTGTCTCAGGGCTATTAGGACTTGCCCTCAGGAAGTGGCCTTGGACCCCGGTGCAGGATCCTaGCCACCTCTGCCTGGCCCA +
Preference number: 4 (lower is better)
Translates to: PSRCLRAIRTCPQEVALDPGAGS*PPLPGP
Trigger: TGGGCCAGGCAGAGGTGGCCAGGATCCTGCACCGGG...GTCCAAGGCCACTTCCTGAGGGCAAGTCCTAATAGCCCTGAGACACCGAGACGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR CCA 90 bp TGCTGCTCGGGCTCCAGGTACGACACGCAGATGAAGTCCTGTACGGAGGAGCGGAGGTGGCATCAGAGGTaGGCGGCAAAGGGCGTGCAG +
Preference number: 4 (lower is better)
Translates to: CCSGSRYDTQMKSCTEERRWHQR*AAKGVQ
Trigger: CTGCACGCCCTTTGCCGCCCACCTCTGATGCCACCT...CCGCTCCTCCGTACAGGACTTCATCTGCGTGTCGTACCTGGAGCCCGAGCAGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555589.5
CDS-3UTR CCA 90 bp ATTCTCCCCACACGATGGCTCCTGCAATCTGCCACAGCTCTGGGGCGTGTCCTGGGGCCCACCTGGAGGTaGGTGAGGTGGCATCAGAGG +
Preference number: 4 (lower is better)
Translates to: ILPTRWLLQSATALGRVLGPTWR*VRWHQR
Trigger: CCTCTGATGCCACCTCACCCACCTCCAGGTGGGCCC...CAGGACACGCCCCAGAGCTGTGGCAGATTGCAGGAGCCATCGTGTGGGGAGAAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR CCA 90 bp TGCTGCTCGGGCTCCAGGTACGACACGCAGATGAAGTCCTGTACGGAGGAGCGGATGGTCTGGGGGACCTaGGGCATGGGGTGTGACGTG +
Preference number: 4 (lower is better)
Translates to: CCSGSRYDTQMKSCTEERMVWGT*GMGCDV
Trigger: CACGTCACACCCCATGCCCCAGGTCCCCCAGACCAT...CCGCTCCTCCGTACAGGACTTCATCTGCGTGTCGTACCTGGAGCCCGAGCAGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000555589.5
CDS-3UTR CCA 90 bp CTGCTCCAGCTCCTCCTCCGTGCTGCTGGTGGAGTAGGAGTCCTGGTCGGTGGCGTCTGGGAGGGGCAGTaGGAAGGTTCTTCTTCGCAG +
Preference number: 4 (lower is better)
Translates to: LLQLLLRAAGGVGVLVGGVWEGQ*EGSSSQ
Trigger: CTGCGAAGAAGAACCTTCCCACTGCCCCTCCCAGAC...GCCACCGACCAGGACTCCTACTCCACCAGCAGCACGGAGGAGGAGCTGGAGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555589.5
CDS-3UTR CCA 90 bp TGGCACGGGGAGCAGCTGTGGCCGGTGCTCCTTCCTAGGCCAGTCCTGGGGAAAGTCTGGGAGGGGCAGTaGGAAGGTTCTTCTTCGCAG +
Preference number: 4 (lower is better)
Translates to: WHGEQLWPVLLPRPVLGKVWEGQ*EGSSSQ
Trigger: CTGCGAAGAAGAACCTTCCCACTGCCCCTCCCAGAC...TTTCCCCAGGACTGGCCTAGGAAGGAGCACCGGCCACAGCTGCTCCCCGTGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR CCA 90 bp GTCCGCGGAGCTGGCCGTGCTTGGCGCCCTGGCGTGTGTCTAGCTGCTTCTTGCGCCATCCCCGGACTTTaGTCTTCTAAGGACACCCTC +
Preference number: 4 (lower is better)
Translates to: VRGAGRAWRPGVCLAASCAIPGL*SSKDTL
Trigger: GAGGGTGTCCTTAGAAGACCAAAGTCCGGGGATGGC...GCAAGAAGCAGCTAGACACACGCCAGGGCGCCAAGCACGGCCAGCTCCGCGGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR CCA 90 bp AGGTGGCATCAGAGGTGGGCGGCAAAGGGCGTGCAGGGCAATTTCCAAGAGGTGTGGGTGGACCCGGCGTaGGTGTCTCCAAGGCCATCG +
Preference number: 4 (lower is better)
Translates to: RWHQRWAAKGVQGNFQEVWVDPA*VSPRPS
Trigger: CGATGGCCTTGGAGACACCCACGCCGGGTCCACCCA...CACCTCTTGGAAATTGCCCTGCACGCCCTTTGCCGCCCACCTCTGATGCCACCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555589.5
CDS-3UTR CCA 90 bp GTACGAGCCCTTGTCCTGCGCCAGCTCCACCACCTTCTTGTACAGCTTGCGGTTGGCTTTGGCCCTCTCTaGGTGGACCCGGCGTGGGTG +
Preference number: 4 (lower is better)
Translates to: VRALVLRQLHHLLVQLAVGFGPL*VDPAWV
Trigger: CACCCACGCCGGGTCCACCCAGAGAGGGCCAAAGCC...AACCGCAAGCTGTACAAGAAGGTGGTGGAGCTGGCGCAGGACAAGGGCTCGTAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555589.5
CDS-3UTR CCA 90 bp CGACACCCTGAGGTGCTCCTGAGATGCTGGGTCCACCCTGAGTGGCACGGGGAGGGAGCCCTTGAACTCTaGAGAGCTCTGGGAATGGGC +
Preference number: 4 (lower is better)
Translates to: RHPEVLLRCWVHPEWHGEGALEL*RALGMG
Trigger: GCCCATTCCCAGAGCTCTCCAGAGTTCAAGGGCTCC...CTCCCCGTGCCACTCAGGGTGGACCCAGCATCTCAGGAGCACCTCAGGGTGTCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR CCA 90 bp GGAGCTGGCCGTGCTTGGCGCCCTGGCGTGTGTCTAGCTGCTTCTTGCCGGGCACCTTGCCCAGGATCATaGAGGGCTTCTTCTTCACGC +
Preference number: 4 (lower is better)
Translates to: GAGRAWRPGVCLAASCRAPCPGS*RASSSR
Trigger: GCGTGAAGAAGAAGCCCTCCATGATCCTGGGCAAGG...TGCCCGGCAAGAAGCAGCTAGACACACGCCAGGGCGCCAAGCACGGCCAGCTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR CCA 90 bp TGGATAGCGGGTGGCGGGCGCCAAGCTGTCTGCGAGTCCGGCACCTGCGCCTTTGGTCAGTGGTGGTGGTaGCCAGGATCACTAACTGGT +
Preference number: 4 (lower is better)
Translates to: WIAGGGRQAVCESGTCAFGQWWW*PGSLTG
Trigger: ACCAGTTAGTGATCCTGGCCACCACCACCACTGACC...AAAGGCGCAGGTGCCGGACTCGCAGACAGCTTGGCGCCCGCCACCCGCTATCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556418.1
CDS-3UTR CCA 90 bp GCACAGAGCTGCGGGGTCTGGGGGCACCGGGAGCTAAGAGCAGGCTCTGGTGCACACCTAGGTCAGTGGTaGTGGTGGCCAGGATCACTA +
Preference number: 4 (lower is better)
Translates to: AQSCGVWGHRELRAGSGAHLGQW*WWPGSL
Trigger: TAGTGATCCTGGCCACCACCACCACTGACCTAGGTG...TGCACCAGAGCCTGCTCTTAGCTCCCGGTGCCCCCAGACCCCGCAGCTCTGTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR CCA 90 bp GAGGGGGCCCAGGCCTGCAGTGGGGCATGGGAGTCTCTCGCAGGTCATCATGGGCACCTAGGTCAGTGGTaGTGGTGGCCAGGATCACTA +
Preference number: 4 (lower is better)
Translates to: EGAQACSGAWESLAGHHGHLGQW*WWPGSL
Trigger: TAGTGATCCTGGCCACCACCACCACTGACCTAGGTG...CCCATGATGACCTGCGAGAGACTCCCATGCCCCACTGCAGGCCTGGGCCCCCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000555589.5
CDS-3UTR CCA 90 bp ATGGGTCCGCGGAGCTGGCCGTGCTTGGCGCCCTGGCGTGTGTCTAGCTGCTTCCACCTAGGTCAGTGGTaGTGGTGGCCAGGATCACTA +
Preference number: 4 (lower is better)
Translates to: MGPRSWPCLAPWRVSSCFHLGQW*WWPGSL
Trigger: TAGTGATCCTGGCCACCACCACCACTGACCTAGGTG...GAAGCAGCTAGACACACGCCAGGGCGCCAAGCACGGCCAGCTCCGCGGACCCAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR CCA 90 bp AGTGGCACGGGGAGCAGCTGTGGCCGGTGCTCCTTCCTAGGCCAGTCCTGGGGATCACACCTAGGTCAGTaGTGGTGGTGGCCAGGATCA +
Preference number: 4 (lower is better)
Translates to: SGTGSSCGRCSFLGQSWGSHLGQ*WWWPGS
Trigger: TGATCCTGGCCACCACCACCACTGACCTAGGTGTGA...TCCCCAGGACTGGCCTAGGAAGGAGCACCGGCCACAGCTGCTCCCCGTGCCACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR CCA 90 bp GCTGAACTGCTCCAGCTCCTCCTCCGTGCTGCTGGTGGAGTAGGAGTCCTGGTCCCTCCGGCACGCTGGTaGTCACACCTAGGTCAGTGG +
Preference number: 4 (lower is better)
Translates to: AELLQLLLRAAGGVGVLVPPARW*SHLGQW
Trigger: CCACTGACCTAGGTGTGACCACCAGCGTGCCGGAGG...GACCAGGACTCCTACTCCACCAGCAGCACGGAGGAGGAGCTGGAGCAGTTCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555589.5
CDS-3UTR CCA 90 bp CAGGGCCCCGTAGGTGGTGGTCAGATAGTAGGAACCCTCCCCCAGCTGCAGGGCGGGCCCCGTAGGTGGTaGTCAGATAGTAGGAACCCT +
Preference number: 4 (lower is better)
Translates to: QGPVGGGQIVGTLPQLQGGPRRW*SDSRNP
Trigger: AGGGTTCCTACTATCTGACCACCACCTACGGGGCCC...GCCCTGCAGCTGGGGGAGGGTTCCTACTATCTGACCACCACCTACGGGGCCCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000555589.5
CDS-3UTR CCA 90 bp TGGCACGGGGAGCAGCTGTGGCCGGTGCTCCTTCCTAGGCCAGTCCTGGGGAAAGGGCCCCGTAGGTGGTaGTCAGATAGTAGGAACCCT +
Preference number: 4 (lower is better)
Translates to: WHGEQLWPVLLPRPVLGKGPRRW*SDSRNP
Trigger: AGGGTTCCTACTATCTGACCACCACCTACGGGGCCC...TTTCCCCAGGACTGGCCTAGGAAGGAGCACCGGCCACAGCTGCTCCCCGTGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR CCA 90 bp GCTGAACTGCTCCAGCTCCTCCTCCGTGCTGCTGGTGGAGTAGGAGTCCTGGTCGCTCCCAGCGGTGGATaGAGTCCTGCACCTCCACAC +
Preference number: 4 (lower is better)
Translates to: AELLQLLLRAAGGVGVLVAPSGG*SPAPPH
Trigger: GTGTGGAGGTGCAGGACTCCATCCACCGCTGGGAGC...GACCAGGACTCCTACTCCACCAGCAGCACGGAGGAGGAGCTGGAGCAGTTCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555589.5
CDS-3UTR CCA 90 bp CGACACCCTGAGGTGCTCCTGAGATGCTGGGTCCACCCTGAGTGGCACGGGGAGCTTGCCCTCAGGAAGTaGCCTTGGACGAGCGTCATG +
Preference number: 4 (lower is better)
Translates to: RHPEVLLRCWVHPEWHGELALRK*PWTSVM
Trigger: CATGACGCTCGTCCAAGGCCACTTCCTGAGGGCAAG...CTCCCCGTGCCACTCAGGGTGGACCCAGCATCTCAGGAGCACCTCAGGGTGTCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR CCA 90 bp CCGTCTCGGTGTCTCAGGGCTATTAGGACTTGCCCTCAGGAAGTGGCCTTGGACAGGGCGCCGGTTTGTTaGCTGCAGCGGCCTGGAGCG +
Preference number: 4 (lower is better)
Translates to: PSRCLRAIRTCPQEVALDRAPVC*LQRPGA
Trigger: CGCTCCAGGCCGCTGCAGCCAACAAACCGGCGCCCT...GTCCAAGGCCACTTCCTGAGGGCAAGTCCTAATAGCCCTGAGACACCGAGACGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR CCA 90 bp TGTGAAGAGGGCGCCGGTTTGTTGGCTGCAGCGGCCTGGAGCGCCTCTCTCCTGGGGACTCATGGGGAATaGCCTGAGGAGCTACGTGTG +
Preference number: 4 (lower is better)
Translates to: CEEGAGLLAAAAWSASLLGTHGE*PEELRV
Trigger: CACACGTAGCTCCTCAGGCCATTCCCCATGAGTCCC...CAGGAGAGAGGCGCTCCAGGCCGCTGCAGCCAACAAACCGGCGCCCTCTTCACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR CCA 90 bp GTCCTGGGGAAACTAAGCTCGGGCCCTTCTTTGCAAAGACCGAGGATGGGGTGGTCCCTGAGGCGGGGCTaGGCTTGTCCATGGGTCCGC +
Preference number: 4 (lower is better)
Translates to: VLGKLSSGPSLQRPRMGWSLRRG*ACPWVR
Trigger: GCGGACCCATGGACAAGCCCAGCCCCGCCTCAGGGA...CCACCCCATCCTCGGTCTTTGCAAAGAAGGGCCCGAGCTTAGTTTCCCCAGGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR CCA 90 bp CCAGCCCCACACCTGCCGGGCTTTGCCTTTGCTCCCACTGCCTGTGTGGCCTTGGGTGTTGGGAGGGGATaGGAACAGAGGTGTGCTGGA +
Preference number: 4 (lower is better)
Translates to: PAPHLPGFAFAPTACVALGVGRG*EQRCAG
Trigger: TCCAGCACACCTCTGTTCCCATCCCCTCCCAACACC...CAAGGCCACACAGGCAGTGGGAGCAAAGGCAAAGCCCGGCAGGTGTGGGGCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556418.1
CDS-3UTR TCA 90 bp ATTCTCCCCACACGATGGCTCCTGCAATCTGCCACAGCTCTGGGGCGTGTCCTGCTGATGCCCCGGCGGTaGGGAAGGCAGTTTTTCGGG +
Preference number: 4 (lower is better)
Translates to: ILPTRWLLQSATALGRVLLMPRR*GRQFFG
Trigger: CCCGAAAAACTGCCTTCCTCACCGCCGGGGCATCAG...CAGGACACGCCCCAGAGCTGTGGCAGATTGCAGGAGCCATCGTGTGGGGAGAAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR TCA 90 bp GGGGAGCAGCTGTGGCCGGTGCTCCTTCCTAGGCCAGTCCTGGGGAAACTAAGCTGGTCTCAAGGTCCGTaGAGCTGCTGGCCTCAAGGA +
Preference number: 4 (lower is better)
Translates to: GEQLWPVLLPRPVLGKLSWSQGP*SCWPQG
Trigger: TCCTTGAGGCCAGCAGCTTCACGGACCTTGAGACCA...GCTTAGTTTCCCCAGGACTGGCCTAGGAAGGAGCACCGGCCACAGCTGCTCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR TCA 90 bp AACTGGCAAAGCTCAGCCGGTGCCGAGCCTTGCCCAGGATCATGGAGGGCTTCTCCTGGTCGGTGGCCATaGCAGACACCCCCAAGCTGT +
Preference number: 4 (lower is better)
Translates to: NWQSSAGAEPCPGSWRASPGRWP*QTPPSC
Trigger: ACAGCTTGGGGGTGTCTGTCATGGCCACCGACCAGG...AGAAGCCCTCCATGATCCTGGGCAAGGCTCGGCACCGGCTGAGCTTTGCCAGTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555589.5
CDS-3UTR TCA 90 bp AGCTGCTTCTTGCCGGGCACAGAGCTGCGGGGTCTGGGGGCACCGGGAGCTAAGCTAACTGGTTCTCCTTaGGCTGCTGCAGCGAACCAT +
Preference number: 4 (lower is better)
Translates to: SCFLPGTELRGLGAPGAKLTGSP*AAAANH
Trigger: ATGGTTCGCTGCAGCAGCTCAAGGAGAACCAGTTAG...CTTAGCTCCCGGTGCCCCCAGACCCCGCAGCTCTGTGCCCGGCAAGAAGCAGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR TCA 90 bp TGGCACGGGGAGCAGCTGTGGCCGGTGCTCCTTCCTAGGCCAGTCCTGGGGAAATCATGGGGAATGGCCTaGGGAGCTACGTGTGAAGAG +
Preference number: 4 (lower is better)
Translates to: WHGEQLWPVLLPRPVLGKSWGMA*GATCEE
Trigger: CTCTTCACACGTAGCTCCTCAGGCCATTCCCCATGA...TTTCCCCAGGACTGGCCTAGGAAGGAGCACCGGCCACAGCTGCTCCCCGTGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR TCA 90 bp GGGAAACTAAGCTCGGGCCCTTCTTTGCAAAGACCGAGGATGGGGTGGGTGTGGATGCTGGGTCCACCCTaGGTGGCACGGGGAGCAGCT +
Preference number: 4 (lower is better)
Translates to: GKLSSGPSLQRPRMGWVWMLGPP*VARGAA
Trigger: AGCTGCTCCCCGTGCCACTCAGGGTGGACCCAGCAT...CCACACCCACCCCATCCTCGGTCTTTGCAAAGAAGGGCCCGAGCTTAGTTTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR TCA 90 bp CCCGGGCATCCCATAGTGCGGGCGGGCAACACAGTCCAGCCCCTTAGGGCTGCAGAGCAAGGCTGTAGATaGGCCTGTGGGCTCCTTAAA +
Preference number: 4 (lower is better)
Translates to: PGHPIVRAGNTVQPLRAAEQGCR*ACGLLK
Trigger: TTTAAGGAGCCCACAGGCTCATCTACAGCCTTGCTC...TGCAGCCCTAAGGGGCTGGACTGTGTTGCCCGCCCGCACTATGGGATGCCCGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556418.1
CDS-3UTR TCA 90 bp GGCTTCTCAGAGGAGGGGCTGTTGGAGAAACTGAGTCGTCTTAAAGGATGGGCAGGGGAAGGCCCGGCATaGGCAGGGCGGGCAAGGCGA +
Preference number: 4 (lower is better)
Translates to: GFSEEGLLEKLSRLKGWAGEGPA*AGRARR
Trigger: TCGCCTTGCCCGCCCTGCTCATGCCGGGCCTTCCCC...TGCCCATCCTTTAAGACGACTCAGTTTCTCCAACAGCCCCTCCTCTGAGAAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556418.1
CDS-3UTR GCA 90 bp AATGGCCCATGTCCCTCTGCTGCGTGGACGTCGCGGTCGGGAGTGCGCAGCCAGCCTCTTCCTCTCCTTTaGCAACAACTGGAACCGGAC +
Preference number: 4 (lower is better)
Translates to: NGPCPSAAWTSRSGVRSQPLPLL*QQLEPD
Trigger: GTCCGGTTCCAGTTGTTGGCAAAGGAGAGGAAGAGG...CTGGCTGCGCACTCCCGACCGCGACGTCCACGCAGCAGAGGGACATGGGCCATT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR GCA 90 bp TCATGGAATGGCCCATGTCCCTCTGCTGCGTGGACGTCGCGGTCGGGAGTGCGCAGGCCATCGCCTGTGTaGAGAGCTCAGCGTTCTCTA +
Preference number: 4 (lower is better)
Translates to: SWNGPCPSAAWTSRSGVRRPSPV*RAQRSL
Trigger: TAGAGAACGCTGAGCTCTGCACACAGGCGATGGCCT...GCGCACTCCCGACCGCGACGTCCACGCAGCAGAGGGACATGGGCCATTCCATGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR GCA 90 bp TGCAGGGGTGGAGGCCTGTCTCTTAACCGACACCCTGAGGTGCTCCTGAGATGCCTGGGGCTGCTGAACTaGTCCAGCTCCTCCTCCGTG +
Preference number: 4 (lower is better)
Translates to: CRGGGLSLNRHPEVLLRCLGLLN*SSSSSV
Trigger: CACGGAGGAGGAGCTGGAGCAGTTCAGCAGCCCCAG...GCATCTCAGGAGCACCTCAGGGTGTCGGTTAAGAGACAGGCCTCCACCCCTGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR GCA 90 bp ATTTCCAAGAGGTGGCTGGTCGGTGGGCAGGGCGCTGCTGCAGTCCTCGATGAACTGGGGCTGCTGAACTaGTCCAGCTCCTCCTCCGTG +
Preference number: 4 (lower is better)
Translates to: ISKRWLVGGQGAAAVLDELGLLN*SSSSSV
Trigger: CACGGAGGAGGAGCTGGAGCAGTTCAGCAGCCCCAG...TTCATCGAGGACTGCAGCAGCGCCCTGCCCACCGACCAGCCACCTCTTGGAAAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555589.5
CDS-3UTR GCA 90 bp GGAGCTGGCCGTGCTTGGCGCCCTGGCGTGTGTCTAGCTGCTTCTTGCCGGGCAGCTGGGTCATCATGGTaGGAATCTCCTGCAGCATCT +
Preference number: 4 (lower is better)
Translates to: GAGRAWRPGVCLAASCRAAGSSW*ESPAAS
Trigger: AGATGCTGCAGGAGATTCGCACCATGATGACCCAGC...TGCCCGGCAAGAAGCAGCTAGACACACGCCAGGGCGCCAAGCACGGCCAGCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR GCA 90 bp GGGCCCTTCCTCTGGTGTGGGGAGTCTCACTGCTCCCCTAAGGCAGGGCTGGGCGCTGGGTCATCATGGTaGGAATCTCCTGCAGCATCT +
Preference number: 4 (lower is better)
Translates to: GPFLWCGESHCSPKAGLGAGSSW*ESPAAS
Trigger: AGATGCTGCAGGAGATTCGCACCATGATGACCCAGC...GCCCAGCCCTGCCTTAGGGGAGCAGTGAGACTCCCCACACCAGAGGAAGGGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556418.1
CDS-3UTR GCA 90 bp TCATGGAATGGCCCATGTCCCTCTGCTGCGTGGACGTCGCGGTCGGGAGTGCGCGCAGCGAACCATCCTTaGTGTGGATCTGATGCAGGC +
Preference number: 4 (lower is better)
Translates to: SWNGPCPSAAWTSRSGVRAANHP*CGSDAG
Trigger: GCCTGCATCAGATCCACAGCAAGGATGGTTCGCTGC...GCGCACTCCCGACCGCGACGTCCACGCAGCAGAGGGACATGGGCCATTCCATGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR GCA 90 bp AGTGGCACGGGGAGCAGCTGTGGCCGGTGCTCCTTCCTAGGCCAGTCCTGGGGATTCTCCTTGAGCTGCTaGAGCGAACCATCCTTGCTG +
Preference number: 4 (lower is better)
Translates to: SGTGSSCGRCSFLGQSWGFSLSC*SEPSLL
Trigger: CAGCAAGGATGGTTCGCTGCAGCAGCTCAAGGAGAA...TCCCCAGGACTGGCCTAGGAAGGAGCACCGGCCACAGCTGCTCCCCGTGCCACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR GCA 90 bp GGTCCGCGGAGCTGGCCGTGCTTGGCGCCCTGGCGTGTGTCTAGCTGCTTCTTGTGGTTCTCCTTGAGCTaGTGCAGCGAACCATCCTTG +
Preference number: 4 (lower is better)
Translates to: GPRSWPCLAPWRVSSCFLWFSLS*CSEPSL
Trigger: CAAGGATGGTTCGCTGCAGCAGCTCAAGGAGAACCA...CAAGAAGCAGCTAGACACACGCCAGGGCGCCAAGCACGGCCAGCTCCGCGGACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR GCA 90 bp GCTCCTGCAATCTGCCACAGCTCTGGGGCGTGTCCTGTAGGGAAAGGCCCTGTTAGGGCTTCCCTGGGTTaGCGAGGGCCATGGAGTCGT +
Preference number: 4 (lower is better)
Translates to: APAICHSSGACPVGKGPVRASLG*RGPWSR
Trigger: ACGACTCCATGGCCCTCGGCAACCCAGGGAAGCCCT...AACAGGGCCTTTCCCTACAGGACACGCCCCAGAGCTGTGGCAGATTGCAGGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR GCA 90 bp CGTGAGGTTGCTGCGGGCCAGCACATACATGAGCACAGGCAGGAAGTCATCCGCAGGGCTTCCCTGGGTTaGCGAGGGCCATGGAGTCGT +
Preference number: 4 (lower is better)
Translates to: REVAAGQHIHEHRQEVIRRASLG*RGPWSR
Trigger: ACGACTCCATGGCCCTCGGCAACCCAGGGAAGCCCT...GCGGATGACTTCCTGCCTGTGCTCATGTATGTGCTGGCCCGCAGCAACCTCACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555589.5
CDS-3UTR GCA 90 bp TCTCCCCACACGATGGCTCCTGCAATCTGCCACAGCTCTGGGGCGTGTCCTGTAAGGGCTTCCCTGGGTTaGCGAGGGCCATGGAGTCGT +
Preference number: 4 (lower is better)
Translates to: SPHTMAPAICHSSGACPVRASLG*RGPWSR
Trigger: ACGACTCCATGGCCCTCGGCAACCCAGGGAAGCCCT...TACAGGACACGCCCCAGAGCTGTGGCAGATTGCAGGAGCCATCGTGTGGGGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR GCA 90 bp CCTGCACCCCAGGCGCAATGCTGGGCACGGAGGGCAGCACAGATAAGAAGGGAGACCTCCACACTCAGCTaGCGGGTCACCGTGATCTTG +
Preference number: 4 (lower is better)
Translates to: PAPQAQCWARRAAQIRRETSTLS*RVTVIL
Trigger: CAAGATCACGGTGACCCGGCAGCTGAGTGTGGAGGT...CTCCCTTCTTATCTGTGCTGCCCTCCGTGCCCAGCATTGCGCCTGGGGTGCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556418.1
CDS-3UTR GCA 90 bp CGTCTCCCAAACAGTGGGTGGTCCGTTTCATCCATACTCTGCCTGGCTCAGCATGCCAGCGTCCGCGCCTaGTGCTCGGGCTCCAGGTAC +
Preference number: 4 (lower is better)
Translates to: RLPNSGWSVSSILCLAQHASVRA*CSGSRY
Trigger: GTACCTGGAGCCCGAGCAGCAGGCGCGGACGCTGGC...ATGCTGAGCCAGGCAGAGTATGGATGAAACGGACCACCCACTGTTTGGGAGACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556418.1
CDS-3UTR GCA 90 bp GTGGTCACACCTAGGTCAGTGGTGGTGGTGGCCAGGATCACTAACTGGTTCTCCAACTTCTCCGCGCACTaGGCGCACAGCGCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: VVTPRSVVVVARITNWFSNFSAH*AHSAWA
Trigger: GGCCCAGGCGCTGTGCGCGCAGTGCGCGGAGAAGTT...GGAGAACCAGTTAGTGATCCTGGCCACCACCACCACTGACCTAGGTGTGACCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555589.5
CDS-3UTR GCA 90 bp CCAGCCCCACACCTGCCGGGCTTTGCCTTTGCTCCCACTGCCTGTGTGGCCTTGGTGTCTCATTCCTCCTaGACCCTTCCTGCTTGCCCA +
Preference number: 4 (lower is better)
Translates to: PAPHLPGFAFAPTACVALVSHSS*TLPACP
Trigger: TGGGCAAGCAGGAAGGGTGCAGGAGGAATGAGACAC...CAAGGCCACACAGGCAGTGGGAGCAAAGGCAAAGCCCGGCAGGTGTGGGGCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556418.1
CDS-3UTR GCA 90 bp TGGGAGGGGATGGGAACAGAGGTGTGCTGGAGCTGGCTCACACCCGCCAGGGAGCAGACCCTTGGCAGCTaGTGCATTTGTCCAGGGACT +
Preference number: 4 (lower is better)
Translates to: WEGMGTEVCWSWLTPAREQTLGS*CICPGT
Trigger: AGTCCCTGGACAAATGCAGCAGCTGCCAAGGGTCTG...CTCCCTGGCGGGTGTGAGCCAGCTCCAGCACACCTCTGTTCCCATCCCCTCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556418.1
CDS-3UTR CCA 90 bp AGGTGGCATCAGAGGTGGGCGGCAAAGGGCGTGCAGGGCAATTTCCAAGAGGTGTGCTGGCCTCAAGGATaGCCTGGGGTAGCCGCAGTG +
Preference number: 4 (lower is better)
Translates to: RWHQRWAAKGVQGNFQEVCWPQG*PGVAAV
Trigger: CACTGCGGCTACCCCAGGCCATCCTTGAGGCCAGCA...CACCTCTTGGAAATTGCCCTGCACGCCCTTTGCCGCCCACCTCTGATGCCACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555589.5
CDS-3UTR CCA 90 bp TCACAACTGTCCTGCGACGTTGGCCTGGGCACGTCATGGAATGGCCCATGTCCCTTTCCAAGAGGTGGCTaGTCGGTGGGCAGGGCGCTG +
Preference number: 4 (lower is better)
Translates to: SQLSCDVGLGTSWNGPCPFPRGG*SVGRAL
Trigger: CAGCGCCCTGCCCACCGACCAGCCACCTCTTGGAAA...GGGACATGGGCCATTCCATGACGTGCCCAGGCCAACGTCGCAGGACAGTTGTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR CCA 90 bp TCGCAGGTCATCATGGGCGGCTGGTTCGGATGGTCTGGGGGACCTGGGGCATGGGCCATCCCCGGACTTTaGTCTTCTAAGGACACCCTC +
Preference number: 4 (lower is better)
Translates to: SQVIMGGWFGWSGGPGAWAIPGL*SSKDTL
Trigger: GAGGGTGTCCTTAGAAGACCAAAGTCCGGGGATGGC...CCATGCCCCAGGTCCCCCAGACCATCCGAACCAGCCGCCCATGATGACCTGCGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000555589.5
CDS-3UTR CCA 90 bp CCGTCTCGGTGTCTCAGGGCTATTAGGACTTGCCCTCAGGAAGTGGCCTTGGACTTGGCCCTCTCTGGGTaGACCCGGCGTGGGTGTCTC +
Preference number: 4 (lower is better)
Translates to: PSRCLRAIRTCPQEVALDLALSG*TRRGCL
Trigger: GAGACACCCACGCCGGGTCCACCCAGAGAGGGCCAA...GTCCAAGGCCACTTCCTGAGGGCAAGTCCTAATAGCCCTGAGACACCGAGACGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR CCA 90 bp CTGCTCCAGCTCCTCCTCCGTGCTGCTGGTGGAGTAGGAGTCCTGGTCGGTGGCCCTTGCCCAGGATCATaGAGGGCTTCTTCTTCACGC +
Preference number: 4 (lower is better)
Translates to: LLQLLLRAAGGVGVLVGGPCPGS*RASSSR
Trigger: GCGTGAAGAAGAAGCCCTCCATGATCCTGGGCAAGG...GCCACCGACCAGGACTCCTACTCCACCAGCAGCACGGAGGAGGAGCTGGAGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555589.5
CDS-3UTR CCA 90 bp CGAGCCTTGCCCAGGATCATGGAGGGCTTCTTCTTCACGCTGGGGCTGCTGAACTCCGTGCTGGAGGTCTaGCGCGCCATCATCTCCAGG +
Preference number: 4 (lower is better)
Translates to: RALPRIMEGFFFTLGLLNSVLEV*RAIISR
Trigger: CCTGGAGATGATGGCGCGCCAGACCTCCAGCACGGA...GTTCAGCAGCCCCAGCGTGAAGAAGAAGCCCTCCATGATCCTGGGCAAGGCTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555589.5
CDS-3UTR CCA 90 bp GCTCCTGCAATCTGCCACAGCTCTGGGGCGTGTCCTGTAGGGAAAGGCCCTGTTGCAGCATCTCCGTGCTaGAGGTCTGGCGCGCCATCA +
Preference number: 4 (lower is better)
Translates to: APAICHSSGACPVGKGPVAASPC*RSGAPS
Trigger: TGATGGCGCGCCAGACCTCCAGCACGGAGATGCTGC...AACAGGGCCTTTCCCTACAGGACACGCCCCAGAGCTGTGGCAGATTGCAGGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR CCA 90 bp GTCCGCGGAGCTGGCCGTGCTTGGCGCCCTGGCGTGTGTCTAGCTGCTTCTTGCGCCAGGATCACTAACTaGTTCTCCTTGAGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: VRGAGRAWRPGVCLAASCARITN*FSLSCC
Trigger: GCAGCAGCTCAAGGAGAACCAGTTAGTGATCCTGGC...GCAAGAAGCAGCTAGACACACGCCAGGGCGCCAAGCACGGCCAGCTCCGCGGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR CCA 90 bp ATTCTCCCCACACGATGGCTCCTGCAATCTGCCACAGCTCTGGGGCGTGTCCTGCCTCCGGCACGCTGGTaGTCACACCTAGGTCAGTGG +
Preference number: 4 (lower is better)
Translates to: ILPTRWLLQSATALGRVLPPARW*SHLGQW
Trigger: CCACTGACCTAGGTGTGACCACCAGCGTGCCGGAGG...CAGGACACGCCCCAGAGCTGTGGCAGATTGCAGGAGCCATCGTGTGGGGAGAAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR CCA 90 bp CGAGGCCGGGCTCCTGTCAAGAGCTTCACGGGGACCGCCCATTTCTTCCAGGAGGGGCCCCGTAGGTGGTaGTCAGATAGTAGGAACCCT +
Preference number: 4 (lower is better)
Translates to: RGRAPVKSFTGTAHFFQEGPRRW*SDSRNP
Trigger: AGGGTTCCTACTATCTGACCACCACCTACGGGGCCC...CTCCTGGAAGAAATGGGCGGTCCCCGTGAAGCTCTTGACAGGAGCCCGGCCTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000556418.1
CDS-3UTR CCA 90 bp GCTCCAGGGCCCCGTAGGTGGTGGTCAGATAGTAGGAACCCTCCCCCAGCTGCACCAGGGCCCCGTAGGTaGTGGTCAGATAGTAGGAAC +
Preference number: 4 (lower is better)
Translates to: APGPRRWWSDSRNPPPAAPGPRR*WSDSRN
Trigger: GTTCCTACTATCTGACCACCACCTACGGGGCCCTGG...TGCAGCTGGGGGAGGGTTCCTACTATCTGACCACCACCTACGGGGCCCTGGAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000555589.5
CDS-3UTR CCA 90 bp ATTCTCCCCACACGATGGCTCCTGCAATCTGCCACAGCTCTGGGGCGTGTCCTGGCTCCCAGCGGTGGATaGAGTCCTGCACCTCCACAC +
Preference number: 4 (lower is better)
Translates to: ILPTRWLLQSATALGRVLAPSGG*SPAPPH
Trigger: GTGTGGAGGTGCAGGACTCCATCCACCGCTGGGAGC...CAGGACACGCCCCAGAGCTGTGGCAGATTGCAGGAGCCATCGTGTGGGGAGAAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR CCA 90 bp TCAGTGGTGGTGGTGGCCAGGATCACTAACTGGTTCTCCTTGAGCTGCTGCAGCCGGCGCTCCCAGCGGTaGATGGAGTCCTGCACCTCC +
Preference number: 4 (lower is better)
Translates to: SVVVVARITNWFSLSCCSRRSQR*MESCTS
Trigger: GGAGGTGCAGGACTCCATCCACCGCTGGGAGCGCCG...GCTGCAGCAGCTCAAGGAGAACCAGTTAGTGATCCTGGCCACCACCACCACTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555589.5
CDS-3UTR CCA 90 bp ATTCTCCCCACACGATGGCTCCTGCAATCTGCCACAGCTCTGGGGCGTGTCCTGGCTAAGAGCAGGCTCTaGTGCAGGGGTGGAGGCCTG +
Preference number: 4 (lower is better)
Translates to: ILPTRWLLQSATALGRVLAKSRL*CRGGGL
Trigger: CAGGCCTCCACCCCTGCACCAGAGCCTGCTCTTAGC...CAGGACACGCCCCAGAGCTGTGGCAGATTGCAGGAGCCATCGTGTGGGGAGAAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR CCA 90 bp CGTCTCGGTGTCTCAGGGCTATTAGGACTTGCCCTCAGGAAGTGGCCTTGGACGCAGAGCTGCGGGGTCTaGGGGCACCGGGAGCTAAGA +
Preference number: 4 (lower is better)
Translates to: RLGVSGLLGLALRKWPWTQSCGV*GHRELR
Trigger: TCTTAGCTCCCGGTGCCCCCAGACCCCGCAGCTCTG...CGTCCAAGGCCACTTCCTGAGGGCAAGTCCTAATAGCCCTGAGACACCGAGACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR CCA 90 bp TGGGTCCGCGGAGCTGGCCGTGCTTGGCGCCCTGGCGTGTGTCTAGCTGCTTCTATTCTCCCCACACGATaGCTCCTGCAATCTGCCACA +
Preference number: 4 (lower is better)
Translates to: WVRGAGRAWRPGVCLAASILPTR*LLQSAT
Trigger: TGTGGCAGATTGCAGGAGCCATCGTGTGGGGAGAAT...AGAAGCAGCTAGACACACGCCAGGGCGCCAAGCACGGCCAGCTCCGCGGACCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR CCA 90 bp GTCTCATTCCTCCTGCACCCTTCCTGCTTGCCCAGGGAGAACACCAATGCCTGCGGAGGGGTGGGCCACTaGGTTGGTGGGGGTTACGCA +
Preference number: 4 (lower is better)
Translates to: VSFLLHPSCLPRENTNACGGVGH*VGGGYA
Trigger: TGCGTAACCCCCACCAACCCAGTGGCCCACCCCTCC...GCAGGCATTGGTGTTCTCCCTGGGCAAGCAGGAAGGGTGCAGGAGGAATGAGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000556418.1
CDS-3UTR CCA 90 bp TGGATAGCGGGTGGCGGGCGCCAAGCTGTCTGCGAGTCCGGCACCTGCGCCTTTGCATGTTTGGGGAACTaGGGGCAGCTGGATTTGATG +
Preference number: 4 (lower is better)
Translates to: WIAGGGRQAVCESGTCAFACLGN*GQLDLM
Trigger: CATCAAATCCAGCTGCCCCCAGTTCCCCAAACATGC...AAAGGCGCAGGTGCCGGACTCGCAGACAGCTTGGCGCCCGCCACCCGCTATCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556418.1
CDS-3UTR CCA 90 bp AAGGGAGGTGCGAGCCCGCCCGGGCATCCCATAGTGCGGGCGGGCAACACAGTCCCTGTCTCCCAGGCCTaGGCTCTGCTTATTATAGAT +
Preference number: 4 (lower is better)
Translates to: KGGASPPGHPIVRAGNTVPVSQA*ALLIID
Trigger: ATCTATAATAAGCAGAGCCCAGGCCTGGGAGACAGG...GACTGTGTTGCCCGCCCGCACTATGGGATGCCCGGGCGGGCTCGCACCTCCCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556418.1
CDS-3UTR CCA 90 bp TCCCTCCAGGTGAGTTCCCTGCACCCCAGGCGCAATGCTGGGCACGGAGGGCAGCATAGTCAGCCTGTGTaGGCAGGAAAACTGAGTCCC +
Preference number: 4 (lower is better)
Translates to: SLQVSSLHPRRNAGHGGQHSQPV*AGKLSP
Trigger: GGGACTCAGTTTTCCTGCCCACACAGGCTGACTATG...CTGCCCTCCGTGCCCAGCATTGCGCCTGGGGTGCAGGGAACTCACCTGGAGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556418.1
CDS-3UTR CCA 90 bp GTCTCATTCCTCCTGCACCCTTCCTGCTTGCCCAGGGAGAACACCAATGCCTGCGGGGCTGCCCCCTTGTaGCCGGATTGGGAACAGCAG +
Preference number: 4 (lower is better)
Translates to: VSFLLHPSCLPRENTNACGAAPL*PDWEQQ
Trigger: CTGCTGTTCCCAATCCGGCCACAAGGGGGCAGCCCC...GCAGGCATTGGTGTTCTCCCTGGGCAAGCAGGAAGGGTGCAGGAGGAATGAGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000556418.1
CDS-3UTR TCA 90 bp GGGAAACTAAGCTCGGGCCCTTCTTTGCAAAGACCGAGGATGGGGTGGGTGTGGGCTTCTCCAGGATGCTaGTGCCCCGGCGGTGAGGAA +
Preference number: 4 (lower is better)
Translates to: GKLSSGPSLQRPRMGWVWASPGC*CPGGEE
Trigger: TTCCTCACCGCCGGGGCATCAGCATCCTGGAGAAGC...CCACACCCACCCCATCCTCGGTCTTTGCAAAGAAGGGCCCGAGCTTAGTTTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR TCA 90 bp CCGGGCACAGAGCTGCGGGGTCTGGGGGCACCGGGAGCTAAGAGCAGGCTCTGGGCAGTAAGTCTCTACTaGCACAGTAGAACGCAATCA +
Preference number: 4 (lower is better)
Translates to: PGTELRGLGAPGAKSRLWAVSLY*HSRTQS
Trigger: TGATTGCGTTCTACTGTGTCAGTAGAGACTTACTGC...CCAGAGCCTGCTCTTAGCTCCCGGTGCCCCCAGACCCCGCAGCTCTGTGCCCGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR TCA 90 bp AGCTGCTTCTTGCCGGGCACAGAGCTGCGGGGTCTGGGGGCACCGGGAGCTAAGGATCTGATGCAGGCATaGGTTGATGGCTTCCTTCAG +
Preference number: 4 (lower is better)
Translates to: SCFLPGTELRGLGAPGAKDLMQA*VDGFLQ
Trigger: CTGAAGGAAGCCATCAACTCATGCCTGCATCAGATC...CTTAGCTCCCGGTGCCCCCAGACCCCGCAGCTCTGTGCCCGGCAAGAAGCAGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR TCA 90 bp CCCGGGCATCCCATAGTGCGGGCGGGCAACACAGTCCAGCCCCTTAGGGCTGCATCCTTGCTGTGGATCTaGTGCAGGCATGAGTTGATG +
Preference number: 4 (lower is better)
Translates to: PGHPIVRAGNTVQPLRAASLLWI*CRHELM
Trigger: CATCAACTCATGCCTGCATCAGATCCACAGCAAGGA...TGCAGCCCTAAGGGGCTGGACTGTGTTGCCCGCCCGCACTATGGGATGCCCGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556418.1
CDS-3UTR TCA 90 bp AGCTGCTTCTTGCCGGGCACAGAGCTGCGGGGTCTGGGGGCACCGGGAGCTAAGTCCTTGCTGTGGATCTaGTGCAGGCATGAGTTGATG +
Preference number: 4 (lower is better)
Translates to: SCFLPGTELRGLGAPGAKSLLWI*CRHELM
Trigger: CATCAACTCATGCCTGCATCAGATCCACAGCAAGGA...CTTAGCTCCCGGTGCCCCCAGACCCCGCAGCTCTGTGCCCGGCAAGAAGCAGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR TCA 90 bp GCACAGAGCTGCGGGGTCTGGGGGCACCGGGAGCTAAGAGCAGGCTCTGGTGCACCTTGTGCATGCTGGTaGACTTCTGCAGGATCTTCT +
Preference number: 4 (lower is better)
Translates to: AQSCGVWGHRELRAGSGAPCACW*TSAGSS
Trigger: AGAAGATCCTGCAGAAGTTCACCAGCATGCACAAGG...TGCACCAGAGCCTGCTCTTAGCTCCCGGTGCCCCCAGACCCCGCAGCTCTGTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR TCA 90 bp CCGGACTTTGGTCTTCTAAGGACACCCTCTCGGAAACGCGGCGTCTGGGAGGGGTCTTGTCGTAGCTCTTaGTGTGCTCCAGGGCCCCGT +
Preference number: 4 (lower is better)
Translates to: PDFGLLRTPSRKRGVWEGSCRSS*CAPGPR
Trigger: ACGGGGCCCTGGAGCACATCAAGAGCTACGACAAGA...CCCCTCCCAGACGCCGCGTTTCCGAGAGGGTGTCCTTAGAAGACCAAAGTCCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555589.5
CDS-3UTR TCA 90 bp TGCTGCTCGGGCTCCAGGTACGACACGCAGATGAAGTCCTGTACGGAGGAGCGGGGTACGACACGCAGATaGAGTCCTGTACGGAGGAGC +
Preference number: 4 (lower is better)
Translates to: CCSGSRYDTQMKSCTEERGTTRR*SPVRRS
Trigger: GCTCCTCCGTACAGGACTTCATCTGCGTGTCGTACC...CCGCTCCTCCGTACAGGACTTCATCTGCGTGTCGTACCTGGAGCCCGAGCAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555589.5
CDS-3UTR TCA 90 bp TGGTCTGCTCTGGGTGTCAGAGGAGTGAGTCTGCATAGCTGCTCACAGCTCTGGGCTCGGCGGAGACCGTaGTGGCAACTGGTGGCTAGG +
Preference number: 4 (lower is better)
Translates to: WSALGVRGVSLHSCSQLWARRRP*WQLVAR
Trigger: CCTAGCCACCAGTTGCCATCACGGTCTCCGCCGAGC...CCAGAGCTGTGAGCAGCTATGCAGACTCACTCCTCTGACACCCAGAGCAGACCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556418.1
CDS-3UTR GCA 90 bp TGGGTCCGCGGAGCTGGCCGTGCTTGGCGCCCTGGCGTGTGTCTAGCTGCTTCTGCAGACAAAGCCGCATaGCATCTTCCTCTTCCTCTT +
Preference number: 4 (lower is better)
Translates to: WVRGAGRAWRPGVCLAASADKAA*HLPLPL
Trigger: AAGAGGAAGAGGAAGATGGCATGCGGCTTTGTCTGC...AGAAGCAGCTAGACACACGCCAGGGCGCCAAGCACGGCCAGCTCCGCGGACCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR GCA 90 bp TGCAGGGGTGGAGGCCTGTCTCTTAACCGACACCCTGAGGTGCTCCTGAGATGCGGGCGGCAAAGGGCGTaGAGGGCAATTTCCAAGAGG +
Preference number: 4 (lower is better)
Translates to: CRGGGLSLNRHPEVLLRCGRQRA*RAISKR
Trigger: CCTCTTGGAAATTGCCCTGCACGCCCTTTGCCGCCC...GCATCTCAGGAGCACCTCAGGGTGTCGGTTAAGAGACAGGCCTCCACCCCTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR GCA 90 bp AGGTGGCATCAGAGGTGGGCGGCAAAGGGCGTGCAGGGCAATTTCCAAGAGGTGGGGCGGCAAAGGGCGTaGAGGGCAATTTCCAAGAGG +
Preference number: 4 (lower is better)
Translates to: RWHQRWAAKGVQGNFQEVGRQRA*RAISKR
Trigger: CCTCTTGGAAATTGCCCTGCACGCCCTTTGCCGCCC...CACCTCTTGGAAATTGCCCTGCACGCCCTTTGCCGCCCACCTCTGATGCCACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555589.5
CDS-3UTR GCA 90 bp AGGTGGGCGGCAAAGGGCGTGCAGGGCAATTTCCAAGAGGTGGCTGGTCGGTGGAGGCCATCGCCTGTGTaGAGAGCTCAGCGTTCTCTA +
Preference number: 4 (lower is better)
Translates to: RWAAKGVQGNFQEVAGRWRPSPV*RAQRSL
Trigger: TAGAGAACGCTGAGCTCTGCACACAGGCGATGGCCT...CCACCGACCAGCCACCTCTTGGAAATTGCCCTGCACGCCCTTTGCCGCCCACCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555589.5
CDS-3UTR GCA 90 bp TCACACAGCAAGCTAGTACAGGGCTGGGGCCAGAACTCAAGCCTCCTGTCTCCCGCAAAGCTCAGCCGGTaGCGAGCCTTGCCCAGGATC +
Preference number: 4 (lower is better)
Translates to: SHSKLVQGWGQNSSLLSPAKLSR*RALPRI
Trigger: GATCCTGGGCAAGGCTCGGCACCGGCTGAGCTTTGC...GGGAGACAGGAGGCTTGAGTTCTGGCCCCAGCCCTGTACTAGCTTGCTGTGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556418.1
CDS-3UTR GCA 90 bp GATAGCGGGTGGCGGGCGCCAAGCTGTCTGCGAGTCCGGCACCTGCGCCTTTCCCCTTCTTGTACAGCTTaGGGTTGTTGGAGAGGAAAG +
Preference number: 4 (lower is better)
Translates to: DSGWRAPSCLRVRHLRLSPSCTA*GCWRGK
Trigger: CTTTCCTCTCCAACAACCGCAAGCTGTACAAGAAGG...GGAAAGGCGCAGGTGCCGGACTCGCAGACAGCTTGGCGCCCGCCACCCGCTATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556418.1
CDS-3UTR GCA 90 bp CGACACCCTGAGGTGCTCCTGAGATGCTGGGTCCACCCTGAGTGGCACGGGGAGTTCTCCTTGAGCTGCTaGAGCGAACCATCCTTGCTG +
Preference number: 4 (lower is better)
Translates to: RHPEVLLRCWVHPEWHGEFSLSC*SEPSLL
Trigger: CAGCAAGGATGGTTCGCTGCAGCAGCTCAAGGAGAA...CTCCCCGTGCCACTCAGGGTGGACCCAGCATCTCAGGAGCACCTCAGGGTGTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR GCA 90 bp TCTCCCCACACGATGGCTCCTGCAATCTGCCACAGCTCTGGGGCGTGTCCTGTACGGTGGATGGAGTCCTaGACCTCCACACTCAGCTGC +
Preference number: 4 (lower is better)
Translates to: SPHTMAPAICHSSGACPVRWMES*TSTLSC
Trigger: GCAGCTGAGTGTGGAGGTGCAGGACTCCATCCACCG...TACAGGACACGCCCCAGAGCTGTGGCAGATTGCAGGAGCCATCGTGTGGGGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR GCA 90 bp ACATGCCGTCTCGGTGTCTCAGGGCTATTAGGACTTGCCCTCAGGAAGTGGCCTTGGCCCATGTCCCTCTaGTGCGTGGACGTCGCGGTC +
Preference number: 4 (lower is better)
Translates to: TCRLGVSGLLGLALRKWPWPMSL*CVDVAV
Trigger: GACCGCGACGTCCACGCAGCAGAGGGACATGGGCCA...AGGCCACTTCCTGAGGGCAAGTCCTAATAGCCCTGAGACACCGAGACGGCATGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR GCA 90 bp AACTGTCCTGCGACGTTGGCCTGGGCACGTCATGGAATGGCCCATGTCCCTCTGTGTCTAGCTGCTTCTTaGCGGGCACAGAGCTGCGGG +
Preference number: 4 (lower is better)
Translates to: NCPATLAWARHGMAHVPLCLAAS*RAQSCG
Trigger: CCCGCAGCTCTGTGCCCGGCAAGAAGCAGCTAGACA...CAGAGGGACATGGGCCATTCCATGACGTGCCCAGGCCAACGTCGCAGGACAGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR GCA 90 bp GCAGCCAGTGAACTGGGCTGGGCATGTTTGGGGAACTGGGGGCAGCTGGATTTGCTCCTGCACCCTTCCTaGTTGCCCAGGGAGAACACC +
Preference number: 4 (lower is better)
Translates to: AASELGWACLGNWGQLDLLLHPS*LPRENT
Trigger: GGTGTTCTCCCTGGGCAAGCAGGAAGGGTGCAGGAG...CAAATCCAGCTGCCCCCAGTTCCCCAAACATGCCCAGCCCAGTTCACTGGCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000556418.1
CDS-3UTR GCA 90 bp GCAGCCAGTGAACTGGGCTGGGCATGTTTGGGGAACTGGGGGCAGCTGGATTTGGTGAACCATGGGCTGTaGCCTCCCAGAGGTGACAGC +
Preference number: 4 (lower is better)
Translates to: AASELGWACLGNWGQLDLVNHGL*PPRGDS
Trigger: GCTGTCACCTCTGGGAGGGCACAGCCCATGGTTCAC...CAAATCCAGCTGCCCCCAGTTCCCCAAACATGCCCAGCCCAGTTCACTGGCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000556418.1
CDS-3UTR GCA 90 bp TCACACAGCAAGCTAGTACAGGGCTGGGGCCAGAACTCAAGCCTCCTGTCTCCCACCCAGCCCCACACCTaGCGGGCTTTGCCTTTGCTC +
Preference number: 4 (lower is better)
Translates to: SHSKLVQGWGQNSSLLSPTQPHT*RALPLL
Trigger: GAGCAAAGGCAAAGCCCGGCAGGTGTGGGGCTGGGT...GGGAGACAGGAGGCTTGAGTTCTGGCCCCAGCCCTGTACTAGCTTGCTGTGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556418.1
CDS-3UTR CCA 90 bp GGGGAGCAGCTGTGGCCGGTGCTCCTTCCTAGGCCAGTCCTGGGGAAACTAAGCGGCAGTTTTTCGGGTTaGCTGGCAGACAAAGCCGCA +
Preference number: 4 (lower is better)
Translates to: GEQLWPVLLPRPVLGKLSGSFSG*LADKAA
Trigger: TGCGGCTTTGTCTGCCAGCCAACCCGAAAAACTGCC...GCTTAGTTTCCCCAGGACTGGCCTAGGAAGGAGCACCGGCCACAGCTGCTCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR CCA 90 bp CCGAGCCTTGCCCAGGATCATGGAGGGCTTCTTCTTCACGCTGGGGCTGCTGAAGCCTCAAGGATGGCCTaGGGTAGCCGCAGTGTGAAG +
Preference number: 4 (lower is better)
Translates to: PSLAQDHGGLLLHAGAAEASRMA*GSRSVK
Trigger: CTTCACACTGCGGCTACCCCAGGCCATCCTTGAGGC...TTCAGCAGCCCCAGCGTGAAGAAGAAGCCCTCCATGATCCTGGGCAAGGCTCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555589.5
CDS-3UTR CCA 90 bp CGTGAGGTTGCTGCGGGCCAGCACATACATGAGCACAGGCAGGAAGTCATCCGCGCAATTTCCAAGAGGTaGCTGGTCGGTGGGCAGGGC +
Preference number: 4 (lower is better)
Translates to: REVAAGQHIHEHRQEVIRAISKR*LVGGQG
Trigger: GCCCTGCCCACCGACCAGCCACCTCTTGGAAATTGC...GCGGATGACTTCCTGCCTGTGCTCATGTATGTGCTGGCCCGCAGCAACCTCACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555589.5
CDS-3UTR CCA 90 bp GGGAAACTAAGCTCGGGCCCTTCTTTGCAAAGACCGAGGATGGGGTGGGTGTGGAGGTGGCATCAGAGGTaGGCGGCAAAGGGCGTGCAG +
Preference number: 4 (lower is better)
Translates to: GKLSSGPSLQRPRMGWVWRWHQR*AAKGVQ
Trigger: CTGCACGCCCTTTGCCGCCCACCTCTGATGCCACCT...CCACACCCACCCCATCCTCGGTCTTTGCAAAGAAGGGCCCGAGCTTAGTTTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR CCA 90 bp GTGGTCACACCTAGGTCAGTGGTGGTGGTGGCCAGGATCACTAACTGGTTCTCCCTGGTTCGGATGGTCTaGGGGACCTGGGGCATGGGG +
Preference number: 4 (lower is better)
Translates to: VVTPRSVVVVARITNWFSLVRMV*GTWGMG
Trigger: CCCCATGCCCCAGGTCCCCCAGACCATCCGAACCAG...GGAGAACCAGTTAGTGATCCTGGCCACCACCACCACTGACCTAGGTGTGACCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555589.5
CDS-3UTR CCA 90 bp CGTGAGGTTGCTGCGGGCCAGCACATACATGAGCACAGGCAGGAAGTCATCCGCGCCTGCAGTGGGGCATaGGAGTCTCTCGCAGGTCAT +
Preference number: 4 (lower is better)
Translates to: REVAAGQHIHEHRQEVIRACSGA*ESLAGH
Trigger: ATGACCTGCGAGAGACTCCCATGCCCCACTGCAGGC...GCGGATGACTTCCTGCCTGTGCTCATGTATGTGCTGGCCCGCAGCAACCTCACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555589.5
CDS-3UTR CCA 90 bp CGAGCCTTGCCCAGGATCATGGAGGGCTTCTTCTTCACGCTGGGGCTGCTGAACACTGGAGGCTGCCCCTaGCTTCATCGCTTCCTCCCT +
Preference number: 4 (lower is better)
Translates to: RALPRIMEGFFFTLGLLNTGGCP*LHRFLP
Trigger: AGGGAGGAAGCGATGAAGCCAGGGGCAGCCTCCAGT...GTTCAGCAGCCCCAGCGTGAAGAAGAAGCCCTCCATGATCCTGGGCAAGGCTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555589.5
CDS-3UTR CCA 90 bp GTACGAGCCCTTGTCCTGCGCCAGCTCCACCACCTTCTTGTACAGCTTGCGGTTCCTCCGTGCTGCTGGTaGAGTAGGAGTCCTGGTCGG +
Preference number: 4 (lower is better)
Translates to: VRALVLRQLHHLLVQLAVPPCCW*SRSPGR
Trigger: CCGACCAGGACTCCTACTCCACCAGCAGCACGGAGG...AACCGCAAGCTGTACAAGAAGGTGGTGGAGCTGGCGCAGGACAAGGGCTCGTAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555589.5
CDS-3UTR CCA 90 bp ATGGGTCCGCGGAGCTGGCCGTGCTTGGCGCCCTGGCGTGTGTCTAGCTGCTTCACAGCTTGCGGTTGTTaGAGAGGAAAGCGTGGAACA +
Preference number: 4 (lower is better)
Translates to: MGPRSWPCLAPWRVSSCFTACGC*RGKRGT
Trigger: TGTTCCACGCTTTCCTCTCCAACAACCGCAAGCTGT...GAAGCAGCTAGACACACGCCAGGGCGCCAAGCACGGCCAGCTCCGCGGACCCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR CCA 90 bp AATGGCCCATGTCCCTCTGCTGCGTGGACGTCGCGGTCGGGAGTGCGCAGCCAGACAGCTTGCGGTTGTTaGAGAGGAAAGCGTGGAACA +
Preference number: 4 (lower is better)
Translates to: NGPCPSAAWTSRSGVRSQTACGC*RGKRGT
Trigger: TGTTCCACGCTTTCCTCTCCAACAACCGCAAGCTGT...CTGGCTGCGCACTCCCGACCGCGACGTCCACGCAGCAGAGGGACATGGGCCATT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR CCA 90 bp GTCTCATTCCTCCTGCACCCTTCCTGCTTGCCCAGGGAGAACACCAATGCCTGCTCCGTGCTGGAGGTCTaGCGCGCCATCATCTCCAGG +
Preference number: 4 (lower is better)
Translates to: VSFLLHPSCLPRENTNACSVLEV*RAIISR
Trigger: CCTGGAGATGATGGCGCGCCAGACCTCCAGCACGGA...GCAGGCATTGGTGTTCTCCCTGGGCAAGCAGGAAGGGTGCAGGAGGAATGAGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556418.1
CDS-3UTR CCA 90 bp CGACACCCTGAGGTGCTCCTGAGATGCTGGGTCCACCCTGAGTGGCACGGGGAGGCCAGGATCACTAACTaGTTCTCCTTGAGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: RHPEVLLRCWVHPEWHGEARITN*FSLSCC
Trigger: GCAGCAGCTCAAGGAGAACCAGTTAGTGATCCTGGC...CTCCCCGTGCCACTCAGGGTGGACCCAGCATCTCAGGAGCACCTCAGGGTGTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR CCA 90 bp GGGGAGCAGCTGTGGCCGGTGCTCCTTCCTAGGCCAGTCCTGGGGAAACTAAGCGGTCAGTGGTGGTGGTaGCCAGGATCACTAACTGGT +
Preference number: 4 (lower is better)
Translates to: GEQLWPVLLPRPVLGKLSGQWWW*PGSLTG
Trigger: ACCAGTTAGTGATCCTGGCCACCACCACCACTGACC...GCTTAGTTTCCCCAGGACTGGCCTAGGAAGGAGCACCGGCCACAGCTGCTCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR CCA 90 bp GGAGCCGGCGCGTCCCCTGGCTGCTGGTCCACAGGCTCCCCATCATTCATTCATCACCTAGGTCAGTGGTaGTGGTGGCCAGGATCACTA +
Preference number: 4 (lower is better)
Translates to: GAGASPGCWSTGSPSFIHHLGQW*WWPGSL
Trigger: TAGTGATCCTGGCCACCACCACCACTGACCTAGGTG...ATGAATGAATGATGGGGAGCCTGTGGACCAGCAGCCAGGGGACGCGCCGGCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556418.1
CDS-3UTR CCA 90 bp CCGTCTCGGTGTCTCAGGGCTATTAGGACTTGCCCTCAGGAAGTGGCCTTGGACCCTCCGGCACGCTGGTaGTCACACCTAGGTCAGTGG +
Preference number: 4 (lower is better)
Translates to: PSRCLRAIRTCPQEVALDPPARW*SHLGQW
Trigger: CCACTGACCTAGGTGTGACCACCAGCGTGCCGGAGG...GTCCAAGGCCACTTCCTGAGGGCAAGTCCTAATAGCCCTGAGACACCGAGACGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR CCA 90 bp ATGCTGCTGAAACTGGCAAAGCTCAGCCGGTGCCGAGCCTTGCCCAGGATCATGCCCATAGGGCTTCCCTaGGTTGCCGAGGGCCATGGA +
Preference number: 4 (lower is better)
Translates to: MLLKLAKLSRCRALPRIMPIGLP*VAEGHG
Trigger: TCCATGGCCCTCGGCAACCCAGGGAAGCCCTATGGG...CATGATCCTGGGCAAGGCTCGGCACCGGCTGAGCTTTGCCAGTTTCAGCAGCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555589.5
CDS-3UTR CCA 90 bp ATTCTCCCCACACGATGGCTCCTGCAATCTGCCACAGCTCTGGGGCGTGTCCTGGGGCACGTCATGGAATaGCCCATGTCCCTCTGCTGC +
Preference number: 4 (lower is better)
Translates to: ILPTRWLLQSATALGRVLGHVME*PMSLCC
Trigger: GCAGCAGAGGGACATGGGCCATTCCATGACGTGCCC...CAGGACACGCCCCAGAGCTGTGGCAGATTGCAGGAGCCATCGTGTGGGGAGAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR CCA 90 bp AACTGTCCTGCGACGTTGGCCTGGGCACGTCATGGAATGGCCCATGTCCCTCTGGGCCTGGGCACGTCATaGAATGGCCCATGTCCCTCT +
Preference number: 4 (lower is better)
Translates to: NCPATLAWARHGMAHVPLGLGTS*NGPCPS
Trigger: AGAGGGACATGGGCCATTCCATGACGTGCCCAGGCC...CAGAGGGACATGGGCCATTCCATGACGTGCCCAGGCCAACGTCGCAGGACAGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR CCA 90 bp GGGGAGCAGCTGTGGCCGGTGCTCCTTCCTAGGCCAGTCCTGGGGAAACTAAGCAATCTGCCACAGCTCTaGGGCGTGTCCTGTAGGGAA +
Preference number: 4 (lower is better)
Translates to: GEQLWPVLLPRPVLGKLSNLPQL*GVSCRE
Trigger: TTCCCTACAGGACACGCCCCAGAGCTGTGGCAGATT...GCTTAGTTTCCCCAGGACTGGCCTAGGAAGGAGCACCGGCCACAGCTGCTCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR CCA 90 bp TGTGAAGAGGGCGCCGGTTTGTTGGCTGCAGCGGCCTGGAGCGCCTCTCTCCTGATTCTCCCCACACGATaGCTCCTGCAATCTGCCACA +
Preference number: 4 (lower is better)
Translates to: CEEGAGLLAAAAWSASLLILPTR*LLQSAT
Trigger: TGTGGCAGATTGCAGGAGCCATCGTGTGGGGAGAAT...CAGGAGAGAGGCGCTCCAGGCCGCTGCAGCCAACAAACCGGCGCCCTCTTCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR CCA 90 bp CGAGGCCGGGCTCCTGTCAAGAGCTTCACGGGGACCGCCCATTTCTTCCAGGAGGGTTACGCAGACCCTTaGCAGCTGCTGCATTTGTCC +
Preference number: 4 (lower is better)
Translates to: RGRAPVKSFTGTAHFFQEGYADP*QLLHLS
Trigger: GGACAAATGCAGCAGCTGCCAAGGGTCTGCGTAACC...CTCCTGGAAGAAATGGGCGGTCCCCGTGAAGCTCTTGACAGGAGCCCGGCCTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556418.1
CDS-3UTR CCA 90 bp CGAGGCCGGGCTCCTGTCAAGAGCTTCACGGGGACCGCCCATTTCTTCCAGGAGAAGCTAGTACAGGGCTaGGGCCAGAACTCAAGCCTC +
Preference number: 4 (lower is better)
Translates to: RGRAPVKSFTGTAHFFQEKLVQG*GQNSSL
Trigger: GAGGCTTGAGTTCTGGCCCCAGCCCTGTACTAGCTT...CTCCTGGAAGAAATGGGCGGTCCCCGTGAAGCTCTTGACAGGAGCCCGGCCTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556418.1
CDS-3UTR CCA 90 bp TCACACAGCAAGCTAGTACAGGGCTGGGGCCAGAACTCAAGCCTCCTGTCTCCCGGGAGTCCGGGGTGTTaGGAGGGGATGGGAACAGAG +
Preference number: 4 (lower is better)
Translates to: SHSKLVQGWGQNSSLLSPGSPGC*EGMGTE
Trigger: CTCTGTTCCCATCCCCTCCCAACACCCCGGACTCCC...GGGAGACAGGAGGCTTGAGTTCTGGCCCCAGCCCTGTACTAGCTTGCTGTGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000556418.1
CDS-3UTR CCA 90 bp CTGGGAGATGAATTAAGGCGCGTCTCGGAGTCCCTGCAAAGAGGAGCCGGCGCGGACCGTGATGGCAACTaGTGGCTAGGGCTTAGGCGA +
Preference number: 4 (lower is better)
Translates to: LGDELRRVSESLQRGAGADRDGN*WLGLRR
Trigger: TCGCCTAAGCCCTAGCCACCAGTTGCCATCACGGTC...CGCGCCGGCTCCTCTTTGCAGGGACTCCGAGACGCGCCTTAATTCATCTCCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556418.1
CDS-3UTR TCA 90 bp GTGGTCACACCTAGGTCAGTGGTGGTGGTGGCCAGGATCACTAACTGGTTCTCCCTGATGCCCCGGCGGTaGGGAAGGCAGTTTTTCGGG +
Preference number: 4 (lower is better)
Translates to: VVTPRSVVVVARITNWFSLMPRR*GRQFFG
Trigger: CCCGAAAAACTGCCTTCCTCACCGCCGGGGCATCAG...GGAGAACCAGTTAGTGATCCTGGCCACCACCACCACTGACCTAGGTGTGACCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000555589.5
CDS-3UTR TCA 90 bp AACTGGCAAAGCTCAGCCGGTGCCGAGCCTTGCCCAGGATCATGGAGGGCTTCTTGGTCTCAAGGTCCGTaGAGCTGCTGGCCTCAAGGA +
Preference number: 4 (lower is better)
Translates to: NWQSSAGAEPCPGSWRASWSQGP*SCWPQG
Trigger: TCCTTGAGGCCAGCAGCTTCACGGACCTTGAGACCA...AGAAGCCCTCCATGATCCTGGGCAAGGCTCGGCACCGGCTGAGCTTTGCCAGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555589.5
CDS-3UTR TCA 90 bp CCGAGCCTTGCCCAGGATCATGGAGGGCTTCTTCTTCACGCTGGGGCTGCTGAAAGCTCTGGCATGCTGTaGGGATCGCTGGCTTTCACC +
Preference number: 4 (lower is better)
Translates to: PSLAQDHGGLLLHAGAAESSGML*GSLAFT
Trigger: GGTGAAAGCCAGCGATCCTCACAGCATGCCAGAGCT...TTCAGCAGCCCCAGCGTGAAGAAGAAGCCCTCCATGATCCTGGGCAAGGCTCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555589.5
CDS-3UTR TCA 90 bp GGCTTCTCAGAGGAGGGGCTGTTGGAGAAACTGAGTCGTCTTAAAGGATGGGCACACCCCCAAGCTGTCTaGGAGGGAGGCCAGGGAGCC +
Preference number: 4 (lower is better)
Translates to: GFSEEGLLEKLSRLKGWAHPQAV*EGGQGA
Trigger: GGCTCCCTGGCCTCCCTCTCAGACAGCTTGGGGGTG...TGCCCATCCTTTAAGACGACTCAGTTTCTCCAACAGCCCCTCCTCTGAGAAGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000556418.1
CDS-3UTR TCA 90 bp TGTGAAGAGGGCGCCGGTTTGTTGGCTGCAGCGGCCTGGAGCGCCTCTCTCCTGTCCTTGCTGTGGATCTaGTGCAGGCATGAGTTGATG +
Preference number: 4 (lower is better)
Translates to: CEEGAGLLAAAAWSASLLSLLWI*CRHELM
Trigger: CATCAACTCATGCCTGCATCAGATCCACAGCAAGGA...CAGGAGAGAGGCGCTCCAGGCCGCTGCAGCCAACAAACCGGCGCCCTCTTCACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR TCA 90 bp TCGCAGGTCATCATGGGCGGCTGGTTCGGATGGTCTGGGGGACCTGGGGCATGGTCCTTGCTGTGGATCTaGTGCAGGCATGAGTTGATG +
Preference number: 4 (lower is better)
Translates to: SQVIMGGWFGWSGGPGAWSLLWI*CRHELM
Trigger: CATCAACTCATGCCTGCATCAGATCCACAGCAAGGA...CCATGCCCCAGGTCCCCCAGACCATCCGAACCAGCCGCCCATGATGACCTGCGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000555589.5
CDS-3UTR TCA 90 bp TCGCAGGTCATCATGGGCGGCTGGTTCGGATGGTCTGGGGGACCTGGGGCATGGCCTTGTGCATGCTGGTaGACTTCTGCAGGATCTTCT +
Preference number: 4 (lower is better)
Translates to: SQVIMGGWFGWSGGPGAWPCACW*TSAGSS
Trigger: AGAAGATCCTGCAGAAGTTCACCAGCATGCACAAGG...CCATGCCCCAGGTCCCCCAGACCATCCGAACCAGCCGCCCATGATGACCTGCGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000555589.5
CDS-3UTR TCA 90 bp CGAGGCCGGGCTCCTGTCAAGAGCTTCACGGGGACCGCCCATTTCTTCCAGGAGTTAAAGGATGGGCAGTaGCAGCCAGTGAAGAAGGGG +
Preference number: 4 (lower is better)
Translates to: RGRAPVKSFTGTAHFFQELKDGQ*QPVKKG
Trigger: CCCCTTCTTCACTGGCTGTCACTGCCCATCCTTTAA...CTCCTGGAAGAAATGGGCGGTCCCCGTGAAGCTCTTGACAGGAGCCCGGCCTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556418.1
CDS-3UTR TCA 90 bp GTGCTGGAGCTGGCTCACACCCGCCAGGGAGAGCCGACTGCATACACTTCTTTCGTGCCCTCCCAGAGGTaGCAGCTTCATATGCAGAGG +
Preference number: 4 (lower is better)
Translates to: VLELAHTRQGEPTAYTSFVPSQR*QLHMQR
Trigger: CCTCTGCATATGAAGCTGTCACCTCTGGGAGGGCAC...GAAAGAAGTGTATGCAGTCGGCTCTCCCTGGCGGGTGTGAGCCAGCTCCAGCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556418.1
CDS-3UTR TCA 90 bp CCCGGGCATCCCATAGTGCGGGCGGGCAACACAGTCCAGCCCCTTAGGGCTGCACAACTCCACATTCAGTaGTGCCAAGTTGAAGTTGGC +
Preference number: 4 (lower is better)
Translates to: PGHPIVRAGNTVQPLRAAQLHIQ*CQVEVG
Trigger: GCCAACTTCAACTTGGCATCACTGAATGTGGAGTTG...TGCAGCCCTAAGGGGCTGGACTGTGTTGCCCGCCCGCACTATGGGATGCCCGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556418.1
CDS-3UTR GCA 90 bp CGTCTCGGTGTCTCAGGGCTATTAGGACTTGCCCTCAGGAAGTGGCCTTGGACGTGGCCCAGACTCAGCTaGAGCCACACCGGGCATGTT +
Preference number: 4 (lower is better)
Translates to: RLGVSGLLGLALRKWPWTWPRLS*SHTGHV
Trigger: AACATGCCCGGTGTGGCTGCAGCTGAGTCTGGGCCA...CGTCCAAGGCCACTTCCTGAGGGCAAGTCCTAATAGCCCTGAGACACCGAGACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR GCA 90 bp TCAGTGGTGGTGGTGGCCAGGATCACTAACTGGTTCTCCTTGAGCTGCTGCAGCCCAGCTGCTTCGAGCTaGTGTCCCGGCGAACCAGGA +
Preference number: 4 (lower is better)
Translates to: SVVVVARITNWFSLSCCSPAASS*CPGEPG
Trigger: TCCTGGTTCGCCGGGACAGCAGCTCGAAGCAGCTGG...GCTGCAGCAGCTCAAGGAGAACCAGTTAGTGATCCTGGCCACCACCACCACTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555589.5
CDS-3UTR GCA 90 bp ATGCTGCTGAAACTGGCAAAGCTCAGCCGGTGCCGAGCCTTGCCCAGGATCATGCAAGGGACTGGAGGCTaGCCCTGGCTTCATCGCTTC +
Preference number: 4 (lower is better)
Translates to: MLLKLAKLSRCRALPRIMQGTGG*PWLHRF
Trigger: GAAGCGATGAAGCCAGGGGCAGCCTCCAGTCCCTTG...CATGATCCTGGGCAAGGCTCGGCACCGGCTGAGCTTTGCCAGTTTCAGCAGCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555589.5
CDS-3UTR GCA 90 bp CGAGCCTTGCCCAGGATCATGGAGGGCTTCTTCTTCACGCTGGGGCTGCTGAACTGGGCAGCTCTGGCATaGTGTGAGGATCGCTGGCTT +
Preference number: 4 (lower is better)
Translates to: RALPRIMEGFFFTLGLLNWAALA*CEDRWL
Trigger: AAGCCAGCGATCCTCACAGCATGCCAGAGCTGCCCA...GTTCAGCAGCCCCAGCGTGAAGAAGAAGCCCTCCATGATCCTGGGCAAGGCTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555589.5
CDS-3UTR GCA 90 bp GCTGAACTGCTCCAGCTCCTCCTCCGTGCTGCTGGTGGAGTAGGAGTCCTGGTCAGTCCTGCACCAGGCTaGCAAAGTACGAGCCCTTGT +
Preference number: 4 (lower is better)
Translates to: AELLQLLLRAAGGVGVLVSPAPG*QSTSPC
Trigger: ACAAGGGCTCGTACTTTGGCAGCCTGGTGCAGGACT...GACCAGGACTCCTACTCCACCAGCAGCACGGAGGAGGAGCTGGAGCAGTTCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555589.5
CDS-3UTR GCA 90 bp TGCCGGGCACAGAGCTGCGGGGTCTGGGGGCACCGGGAGCTAAGAGCAGGCTCTATGCTGGTGAACTTCTaGAGGATCTTCTCCATCATG +
Preference number: 4 (lower is better)
Translates to: CRAQSCGVWGHRELRAGSMLVNF*RIFSIM
Trigger: CATGATGGAGAAGATCCTGCAGAAGTTCACCAGCAT...AGAGCCTGCTCTTAGCTCCCGGTGCCCCCAGACCCCGCAGCTCTGTGCCCGGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR GCA 90 bp TCACAACTGTCCTGCGACGTTGGCCTGGGCACGTCATGGAATGGCCCATGTCCCACCTCCACACTCAGCTaGCGGGTCACCGTGATCTTG +
Preference number: 4 (lower is better)
Translates to: SQLSCDVGLGTSWNGPCPTSTLS*RVTVIL
Trigger: CAAGATCACGGTGACCCGGCAGCTGAGTGTGGAGGT...GGGACATGGGCCATTCCATGACGTGCCCAGGCCAACGTCGCAGGACAGTTGTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR GCA 90 bp AAGTGGCCTTGGACGAGCGTCATGTTATTTTCACAACTGTCCTGCGACGTTGGCAACAGCCGGTGCGCCTaGGGCCGCTCCACCGCGAAC +
Preference number: 4 (lower is better)
Translates to: KWPWTSVMLFSQLSCDVGNSRCA*GRSTAN
Trigger: GTTCGCGGTGGAGCGGCCGCAGGCGCACCGGCTGTT...GCCAACGTCGCAGGACAGTTGTGAAAATAACATGACGCTCGTCCAAGGCCACTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR GCA 90 bp GCGTCATGTTATTTTCACAACTGTCCTGCGACGTTGGCCTGGGCACGTCATGGACGCCGGTTTGTTGGCTaGAGCGGCCTGGAGCGCCTC +
Preference number: 4 (lower is better)
Translates to: ASCYFHNCPATLAWARHGRRFVG*SGLERL
Trigger: GAGGCGCTCCAGGCCGCTGCAGCCAACAAACCGGCG...TCCATGACGTGCCCAGGCCAACGTCGCAGGACAGTTGTGAAAATAACATGACGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR GCA 90 bp GCTCCTGCAATCTGCCACAGCTCTGGGGCGTGTCCTGTAGGGAAAGGCCCTGTTCCACACGATGGCTCCTaGAATCTGCCACAGCTCTGG +
Preference number: 4 (lower is better)
Translates to: APAICHSSGACPVGKGPVPHDGS*NLPQLW
Trigger: CCAGAGCTGTGGCAGATTGCAGGAGCCATCGTGTGG...AACAGGGCCTTTCCCTACAGGACACGCCCCAGAGCTGTGGCAGATTGCAGGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR GCA 90 bp GGGCCCTTCCTCTGGTGTGGGGAGTCTCACTGCTCCCCTAAGGCAGGGCTGGGCGTTTCATCCATACTCTaGCTGGCTCAGCATCAGGAA +
Preference number: 4 (lower is better)
Translates to: GPFLWCGESHCSPKAGLGVSSIL*LAQHQE
Trigger: TTCCTGATGCTGAGCCAGGCAGAGTATGGATGAAAC...GCCCAGCCCTGCCTTAGGGGAGCAGTGAGACTCCCCACACCAGAGGAAGGGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556418.1
CDS-3UTR CCA 90 bp GGCACGTCATGGAATGGCCCATGTCCCTCTGCTGCGTGGACGTCGCGGTCGGGACTTCCCTCTTTCTTGTaGAGGATTCAGCGAGGAGTC +
Preference number: 4 (lower is better)
Translates to: GTSWNGPCPSAAWTSRSGLPSFL*RIQRGV
Trigger: GACTCCTCGCTGAATCCTCCACAAGAAAGAGGGAAG...TCCCGACCGCGACGTCCACGCAGCAGAGGGACATGGGCCATTCCATGACGTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR CCA 90 bp TCGCAGGTCATCATGGGCGGCTGGTTCGGATGGTCTGGGGGACCTGGGGCATGGCTTCCCTCTTTCTTGTaGAGGATTCAGCGAGGAGTC +
Preference number: 4 (lower is better)
Translates to: SQVIMGGWFGWSGGPGAWLPSFL*RIQRGV
Trigger: GACTCCTCGCTGAATCCTCCACAAGAAAGAGGGAAG...CCATGCCCCAGGTCCCCCAGACCATCCGAACCAGCCGCCCATGATGACCTGCGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000555589.5
CDS-3UTR CCA 90 bp GAGAGGAAAGCGTGGAACATGCTGCTGAAACTGGCAAAGCTCAGCCGGTGCCGATTTCCAAGAGGTGGCTaGTCGGTGGGCAGGGCGCTG +
Preference number: 4 (lower is better)
Translates to: ERKAWNMLLKLAKLSRCRFPRGG*SVGRAL
Trigger: CAGCGCCCTGCCCACCGACCAGCCACCTCTTGGAAA...TCGGCACCGGCTGAGCTTTGCCAGTTTCAGCAGCATGTTCCACGCTTTCCTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555589.5
CDS-3UTR CCA 90 bp GAGAGGAAAGCGTGGAACATGCTGCTGAAACTGGCAAAGCTCAGCCGGTGCCGATGGAGGTGGGTGAGGTaGCATCAGAGGTGGGCGGCA +
Preference number: 4 (lower is better)
Translates to: ERKAWNMLLKLAKLSRCRWRWVR*HQRWAA
Trigger: TGCCGCCCACCTCTGATGCCACCTCACCCACCTCCA...TCGGCACCGGCTGAGCTTTGCCAGTTTCAGCAGCATGTTCCACGCTTTCCTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555589.5
CDS-3UTR CCA 90 bp ACACCTAGGTCAGTGGTGGTGGTGGCCAGGATCACTAACTGGTTCTCCTTGAGCGGGCCCACCTGGAGGTaGGTGAGGTGGCATCAGAGG +
Preference number: 4 (lower is better)
Translates to: TPRSVVVVARITNWFSLSGPTWR*VRWHQR
Trigger: CCTCTGATGCCACCTCACCCACCTCCAGGTGGGCCC...GCTCAAGGAGAACCAGTTAGTGATCCTGGCCACCACCACCACTGACCTAGGTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555589.5
CDS-3UTR CCA 90 bp GTGTCTCCAAGGCCATCGCCTGTGTGCAGAGCTCAGCGTTCTCTAAGGGAGCTGGTCATCATGGGCGGCTaGTTCGGATGGTCTGGGGGA +
Preference number: 4 (lower is better)
Translates to: VSPRPSPVCRAQRSLRELVIMGG*FGWSGG
Trigger: TCCCCCAGACCATCCGAACCAGCCGCCCATGATGAC...CAGCTCCCTTAGAGAACGCTGAGCTCTGCACACAGGCGATGGCCTTGGAGACAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555589.5
CDS-3UTR CCA 90 bp TCTCCCCACACGATGGCTCCTGCAATCTGCCACAGCTCTGGGGCGTGTCCTGTATCTCGCAGGTCATCATaGGCGGCTGGTTCGGATGGT +
Preference number: 4 (lower is better)
Translates to: SPHTMAPAICHSSGACPVSRRSS*AAGSDG
Trigger: ACCATCCGAACCAGCCGCCCATGATGACCTGCGAGA...TACAGGACACGCCCCAGAGCTGTGGCAGATTGCAGGAGCCATCGTGTGGGGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216487.12
CDS-3UTR CCA 90 bp AACTGGCAAAGCTCAGCCGGTGCCGAGCCTTGCCCAGGATCATGGAGGGCTTCTTCTCGCAGGTCATCATaGGCGGCTGGTTCGGATGGT +
Preference number: 4 (lower is better)
Translates to: NWQSSAGAEPCPGSWRASSRRSS*AAGSDG
Trigger: ACCATCCGAACCAGCCGCCCATGATGACCTGCGAGA...AGAAGCCCTCCATGATCCTGGGCAAGGCTCGGCACCGGCTGAGCTTTGCCAGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555589.5
CDS-3UTR CCA 90 bp GCTCCACCACCTTCTTGTACAGCTTGCGGTTGTTGGAGAGGAAAGCGTGGAACAGGAGGCAGGCTGAGCTaGTCCCCCTCTGCCGCCATC +
Preference number: 4 (lower is better)
Translates to: APPPSCTACGCWRGKRGTGGRLS*SPSAAI
Trigger: GATGGCGGCAGAGGGGGACCAGCTCAGCCTGCCTCC...TGTTCCACGCTTTCCTCTCCAACAACCGCAAGCTGTACAAGAAGGTGGTGGAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555589.5
CDS-3UTR CCA 90 bp ATTCTCCCCACACGATGGCTCCTGCAATCTGCCACAGCTCTGGGGCGTGTCCTGTTCACCTCTGTGTCCTaGCCTTGCTCCGTGCTCTCC +
Preference number: 4 (lower is better)
Translates to: ILPTRWLLQSATALGRVLFTSVS*PCSVLS
Trigger: GGAGAGCACGGAGCAAGGCCAGGACACAGAGGTGAA...CAGGACACGCCCCAGAGCTGTGGCAGATTGCAGGAGCCATCGTGTGGGGAGAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR CCA 90 bp CCGGACTTTGGTCTTCTAAGGACACCCTCTCGGAAACGCGGCGTCTGGGAGGGGGTTGTTTGGCTGTCCTaGGCAGCTCTGGCATGCTGT +
Preference number: 4 (lower is better)
Translates to: PDFGLLRTPSRKRGVWEGVVWLS*AALACC
Trigger: ACAGCATGCCAGAGCTGCCCAGGACAGCCAAACAAC...CCCCTCCCAGACGCCGCGTTTCCGAGAGGGTGTCCTTAGAAGACCAAAGTCCGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555589.5
CDS-3UTR CCA 90 bp TCACAACTGTCCTGCGACGTTGGCCTGGGCACGTCATGGAATGGCCCATGTCCCAACTCTGGAGAGCTCTaGGAATGGGCAGTGGCCTGG +
Preference number: 4 (lower is better)
Translates to: SQLSCDVGLGTSWNGPCPNSGEL*EWAVAW
Trigger: CCAGGCCACTGCCCATTCCCAGAGCTCTCCAGAGTT...GGGACATGGGCCATTCCATGACGTGCCCAGGCCAACGTCGCAGGACAGTTGTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR CCA 90 bp AGGTGGCATCAGAGGTGGGCGGCAAAGGGCGTGCAGGGCAATTTCCAAGAGGTGGGAGCCCTTGAACTCTaGAGAGCTCTGGGAATGGGC +
Preference number: 4 (lower is better)
Translates to: RWHQRWAAKGVQGNFQEVGALEL*RALGMG
Trigger: GCCCATTCCCAGAGCTCTCCAGAGTTCAAGGGCTCC...CACCTCTTGGAAATTGCCCTGCACGCCCTTTGCCGCCCACCTCTGATGCCACCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555589.5
CDS-3UTR CCA 90 bp CGTCTCGGTGTCTCAGGGCTATTAGGACTTGCCCTCAGGAAGTGGCCTTGGACGCCTCCTCCGTGCTGCTaGTGGAGTAGGAGTCCTGGT +
Preference number: 4 (lower is better)
Translates to: RLGVSGLLGLALRKWPWTPPPCC*WSRSPG
Trigger: ACCAGGACTCCTACTCCACCAGCAGCACGGAGGAGG...CGTCCAAGGCCACTTCCTGAGGGCAAGTCCTAATAGCCCTGAGACACCGAGACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR CCA 90 bp TGGGTCCGCGGAGCTGGCCGTGCTTGGCGCCCTGGCGTGTGTCTAGCTGCTTCTTTGGAGAGGAAAGCGTaGAACATGCTGCTGAAACTG +
Preference number: 4 (lower is better)
Translates to: WVRGAGRAWRPGVCLAASLERKA*NMLLKL
Trigger: CAGTTTCAGCAGCATGTTCCACGCTTTCCTCTCCAA...AGAAGCAGCTAGACACACGCCAGGGCGCCAAGCACGGCCAGCTCCGCGGACCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR CCA 90 bp CTGCTCCAGCTCCTCCTCCGTGCTGCTGGTGGAGTAGGAGTCCTGGTCGGTGGCACAGCTTGCGGTTGTTaGAGAGGAAAGCGTGGAACA +
Preference number: 4 (lower is better)
Translates to: LLQLLLRAAGGVGVLVGGTACGC*RGKRGT
Trigger: TGTTCCACGCTTTCCTCTCCAACAACCGCAAGCTGT...GCCACCGACCAGGACTCCTACTCCACCAGCAGCACGGAGGAGGAGCTGGAGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555589.5
CDS-3UTR CCA 90 bp TGGGAGGGGATGGGAACAGAGGTGTGCTGGAGCTGGCTCACACCCGCCAGGGAGACAGCTTGCGGTTGTTaGAGAGGAAAGCGTGGAACA +
Preference number: 4 (lower is better)
Translates to: WEGMGTEVCWSWLTPARETACGC*RGKRGT
Trigger: TGTTCCACGCTTTCCTCTCCAACAACCGCAAGCTGT...CTCCCTGGCGGGTGTGAGCCAGCTCCAGCACACCTCTGTTCCCATCCCCTCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556418.1
CDS-3UTR CCA 90 bp TGCAGGGGTGGAGGCCTGTCTCTTAACCGACACCCTGAGGTGCTCCTGAGATGCACTGTCCTGCGACGTTaGCCTGGGCACGTCATGGAA +
Preference number: 4 (lower is better)
Translates to: CRGGGLSLNRHPEVLLRCTVLRR*PGHVME
Trigger: TTCCATGACGTGCCCAGGCCAACGTCGCAGGACAGT...GCATCTCAGGAGCACCTCAGGGTGTCGGTTAAGAGACAGGCCTCCACCCCTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR CCA 90 bp GGAGCCGGCGCGTCCCCTGGCTGCTGGTCCACAGGCTCCCCATCATTCATTCATAGCTCTGGATGTGCCTaGCTCACTAGTCCAACTCTC +
Preference number: 4 (lower is better)
Translates to: GAGASPGCWSTGSPSFIHSSGCA*LTSPTL
Trigger: GAGAGTTGGACTAGTGAGCCAGGCACATCCAGAGCT...ATGAATGAATGATGGGGAGCCTGTGGACCAGCAGCCAGGGGACGCGCCGGCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556418.1
CDS-3UTR CCA 90 bp TGGTCTGCTCTGGGTGTCAGAGGAGTGAGTCTGCATAGCTGCTCACAGCTCTGGCCCGCCTCCCATAAATaGGCGAGCAGGCGCTGGAAG +
Preference number: 4 (lower is better)
Translates to: WSALGVRGVSLHSCSQLWPASHK*ASRRWK
Trigger: CTTCCAGCGCCTGCTCGCCCATTTATGGGAGGCGGG...CCAGAGCTGTGAGCAGCTATGCAGACTCACTCCTCTGACACCCAGAGCAGACCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556418.1
CDS-3UTR CCA 90 bp GGCTTCTCAGAGGAGGGGCTGTTGGAGAAACTGAGTCGTCTTAAAGGATGGGCACCGGGTGAAGGAGGCTaGGCGCAGTCGGGTGGGGAA +
Preference number: 4 (lower is better)
Translates to: GFSEEGLLEKLSRLKGWAPGEGG*AQSGGE
Trigger: TTCCCCACCCGACTGCGCCCAGCCTCCTTCACCCGG...TGCCCATCCTTTAAGACGACTCAGTTTCTCCAACAGCCCCTCCTCTGAGAAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556418.1
3UTR CAA 72 bp CTGCTGAAACTGGCAAAGCTCAGCCGGTGCCGAGCCTaGCCCAGGATCATGGAGGGCTTCTTCTTCACGCTG +
Preference number: 4 (lower is better)
Translates to: LLKLAKLSRCRA*PRIMEGFFFTL
Trigger: CAGCGTGAAGAAGAAGCCCTCCATGATCCTGGGCAAGGCTCGGCACCGGCTGAGCTTTGCCAGTTTCAGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555589.5
CDS-3UTR TCA 90 bp CGTCTCGGTGTCTCAGGGCTATTAGGACTTGCCCTCAGGAAGTGGCCTTGGACGTCTTGTCGTAGCTCTTaGTGTGCTCCAGGGCCCCGT +
Preference number: 4 (lower is better)
Translates to: RLGVSGLLGLALRKWPWTSCRSS*CAPGPR
Trigger: ACGGGGCCCTGGAGCACATCAAGAGCTACGACAAGA...CGTCCAAGGCCACTTCCTGAGGGCAAGTCCTAATAGCCCTGAGACACCGAGACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR TCA 90 bp GTCCTGGGGAAACTAAGCTCGGGCCCTTCTTTGCAAAGACCGAGGATGGGGTGGGGTACGACACGCAGATaGAGTCCTGTACGGAGGAGC +
Preference number: 4 (lower is better)
Translates to: VLGKLSSGPSLQRPRMGWGTTRR*SPVRRS
Trigger: GCTCCTCCGTACAGGACTTCATCTGCGTGTCGTACC...CCACCCCATCCTCGGTCTTTGCAAAGAAGGGCCCGAGCTTAGTTTCCCCAGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR GCA 90 bp TCATGTTATTTTCACAACTGTCCTGCGACGTTGGCCTGGGCACGTCATGGAATGCGGCGTGTCGGATCATaGCGCCGGCAGCTCCGGGAC +
Preference number: 4 (lower is better)
Translates to: SCYFHNCPATLAWARHGMRRVGS*RRQLRD
Trigger: GTCCCGGAGCTGCCGGCGGCATGATCCGACACGCCG...CATTCCATGACGTGCCCAGGCCAACGTCGCAGGACAGTTGTGAAAATAACATGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR GCA 90 bp AGACAAGAGGAAGTGGATCACACTAGGTCATCTCTGGGGAAAATGAGAAGCCGGCGGCGTGTCGGATCATaGCGCCGGCAGCTCCGGGAC +
Preference number: 4 (lower is better)
Translates to: RQEEVDHTRSSLGKMRSRRRVGS*RRQLRD
Trigger: GTCCCGGAGCTGCCGGCGGCATGATCCGACACGCCG...CCGGCTTCTCATTTTCCCCAGAGATGACCTAGTGTGATCCACTTCCTCTTGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557762.1
CDS-3UTR GCA 90 bp GCTCCTGCAATCTGCCACAGCTCTGGGGCGTGTCCTGTAGGGAAAGGCCCTGTTTTCACAGGCACAGTTTaGGTCATGGGCTGTGGGCCT +
Preference number: 4 (lower is better)
Translates to: APAICHSSGACPVGKGPVFTGTV*VMGCGP
Trigger: AGGCCCACAGCCCATGACGCAAACTGTGCCTGTGAA...AACAGGGCCTTTCCCTACAGGACACGCCCCAGAGCTGTGGCAGATTGCAGGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR GCA 90 bp GCTCCACCACCTTCTTGTACAGCTTGCGGTTGTTGGAGAGGAAAGCGTGGAACAGAGCTGGTCCCCCTCTaGCGCCATCCCCGGACTTTG +
Preference number: 4 (lower is better)
Translates to: APPPSCTACGCWRGKRGTELVPL*RHPRTL
Trigger: CAAAGTCCGGGGATGGCGGCAGAGGGGGACCAGCTC...TGTTCCACGCTTTCCTCTCCAACAACCGCAAGCTGTACAAGAAGGTGGTGGAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000555589.5
CDS-3UTR GCA 90 bp GCGTCATGTTATTTTCACAACTGTCCTGCGACGTTGGCCTGGGCACGTCATGGATCTGTGTCCTGGCCTTaGTCCGTGCTCTCCCGGGGC +
Preference number: 4 (lower is better)
Translates to: ASCYFHNCPATLAWARHGSVSWP*SVLSRG
Trigger: GCCCCGGGAGAGCACGGAGCAAGGCCAGGACACAGA...TCCATGACGTGCCCAGGCCAACGTCGCAGGACAGTTGTGAAAATAACATGACGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR GCA 90 bp CCGTCTCGGTGTCTCAGGGCTATTAGGACTTGCCCTCAGGAAGTGGCCTTGGACTGGGCAGCTCTGGCATaGTGTGAGGATCGCTGGCTT +
Preference number: 4 (lower is better)
Translates to: PSRCLRAIRTCPQEVALDWAALA*CEDRWL
Trigger: AAGCCAGCGATCCTCACAGCATGCCAGAGCTGCCCA...GTCCAAGGCCACTTCCTGAGGGCAAGTCCTAATAGCCCTGAGACACCGAGACGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR GCA 90 bp CTGCACCTCCACACTCAGCTGCCGGGTCACCGTGATCTTGTCGTAGCTCTTGATCCAGCTCCTCCTCCGTaGTGCTGGTGGAGTAGGAGT +
Preference number: 4 (lower is better)
Translates to: LHLHTQLPGHRDLVVALDPAPPP*CWWSRS
Trigger: ACTCCTACTCCACCAGCAGCACGGAGGAGGAGCTGG...ATCAAGAGCTACGACAAGATCACGGTGACCCGGCAGCTGAGTGTGGAGGTGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555589.5
CDS-3UTR GCA 90 bp ATTCTCCCCACACGATGGCTCCTGCAATCTGCCACAGCTCTGGGGCGTGTCCTGAGTCCTGCACCAGGCTaGCAAAGTACGAGCCCTTGT +
Preference number: 4 (lower is better)
Translates to: ILPTRWLLQSATALGRVLSPAPG*QSTSPC
Trigger: ACAAGGGCTCGTACTTTGGCAGCCTGGTGCAGGACT...CAGGACACGCCCCAGAGCTGTGGCAGATTGCAGGAGCCATCGTGTGGGGAGAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR GCA 90 bp GCGTCATGTTATTTTCACAACTGTCCTGCGACGTTGGCCTGGGCACGTCATGGACCTGCAGCATCTCCGTaGTGGAGGTCTGGCGCGCCA +
Preference number: 4 (lower is better)
Translates to: ASCYFHNCPATLAWARHGPAASP*WRSGAP
Trigger: TGGCGCGCCAGACCTCCAGCACGGAGATGCTGCAGG...TCCATGACGTGCCCAGGCCAACGTCGCAGGACAGTTGTGAAAATAACATGACGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR GCA 90 bp CGAGCCTTGCCCAGGATCATGGAGGGCTTCTTCTTCACGCTGGGGCTGCTGAACATGGTGCGAATCTCCTaGAGCATCTCCGTGCTGGAG +
Preference number: 4 (lower is better)
Translates to: RALPRIMEGFFFTLGLLNMVRIS*SISVLE
Trigger: CTCCAGCACGGAGATGCTGCAGGAGATTCGCACCAT...GTTCAGCAGCCCCAGCGTGAAGAAGAAGCCCTCCATGATCCTGGGCAAGGCTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555589.5
CDS-3UTR GCA 90 bp GCTGAACTGCTCCAGCTCCTCCTCCGTGCTGCTGGTGGAGTAGGAGTCCTGGTCGCTGGGTCATCATGGTaGGAATCTCCTGCAGCATCT +
Preference number: 4 (lower is better)
Translates to: AELLQLLLRAAGGVGVLVAGSSW*ESPAAS
Trigger: AGATGCTGCAGGAGATTCGCACCATGATGACCCAGC...GACCAGGACTCCTACTCCACCAGCAGCACGGAGGAGGAGCTGGAGCAGTTCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555589.5
CDS-3UTR GCA 90 bp TCTCCCCACACGATGGCTCCTGCAATCTGCCACAGCTCTGGGGCGTGTCCTGTATTTTCACAACTGTCCTaGGACGTTGGCCTGGGCACG +
Preference number: 4 (lower is better)
Translates to: SPHTMAPAICHSSGACPVFSQLS*DVGLGT
Trigger: CGTGCCCAGGCCAACGTCGCAGGACAGTTGTGAAAA...TACAGGACACGCCCCAGAGCTGTGGCAGATTGCAGGAGCCATCGTGTGGGGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR GCA 90 bp CGTCTCGGTGTCTCAGGGCTATTAGGACTTGCCCTCAGGAAGTGGCCTTGGACGGCTCGGGCCCTTCTTTaGAAAGACCGAGGATGGGGT +
Preference number: 4 (lower is better)
Translates to: RLGVSGLLGLALRKWPWTARALL*KDRGWG
Trigger: ACCCCATCCTCGGTCTTTGCAAAGAAGGGCCCGAGC...CGTCCAAGGCCACTTCCTGAGGGCAAGTCCTAATAGCCCTGAGACACCGAGACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR GCA 90 bp CCGTCTCGGTGTCTCAGGGCTATTAGGACTTGCCCTCAGGAAGTGGCCTTGGACTGGCGTGTGTCTAGCTaGTTCTTGCCGGGCACAGAG +
Preference number: 4 (lower is better)
Translates to: PSRCLRAIRTCPQEVALDWRVSS*FLPGTE
Trigger: CTCTGTGCCCGGCAAGAAGCAGCTAGACACACGCCA...GTCCAAGGCCACTTCCTGAGGGCAAGTCCTAATAGCCCTGAGACACCGAGACGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR GCA 90 bp GTCCTGGGGAAACTAAGCTCGGGCCCTTCTTTGCAAAGACCGAGGATGGGGTGGTGGCGTGTGTCTAGCTaGTTCTTGCCGGGCACAGAG +
Preference number: 4 (lower is better)
Translates to: VLGKLSSGPSLQRPRMGWWRVSS*FLPGTE
Trigger: CTCTGTGCCCGGCAAGAAGCAGCTAGACACACGCCA...CCACCCCATCCTCGGTCTTTGCAAAGAAGGGCCCGAGCTTAGTTTCCCCAGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR GCA 90 bp TGGTCTGCTCTGGGTGTCAGAGGAGTGAGTCTGCATAGCTGCTCACAGCTCTGGACACCTGCCGGGCTTTaGCTTTGCTCCCACTGCCTG +
Preference number: 4 (lower is better)
Translates to: WSALGVRGVSLHSCSQLWTPAGL*LCSHCL
Trigger: CAGGCAGTGGGAGCAAAGGCAAAGCCCGGCAGGTGT...CCAGAGCTGTGAGCAGCTATGCAGACTCACTCCTCTGACACCCAGAGCAGACCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556418.1
CDS-3UTR CCA 90 bp CGTCTCGGTGTCTCAGGGCTATTAGGACTTGCCCTCAGGAAGTGGCCTTGGACGAACCCAGACCCAGGTTaGCGATGGTCTCAAGGTCCG +
Preference number: 4 (lower is better)
Translates to: RLGVSGLLGLALRKWPWTNPDPG*RWSQGP
Trigger: CGGACCTTGAGACCATCGCCAACCTGGGTCTGGGTT...CGTCCAAGGCCACTTCCTGAGGGCAAGTCCTAATAGCCCTGAGACACCGAGACG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR CCA 90 bp GCCCTCAGGAAGTGGCCTTGGACGAGCGTCATGTTATTTTCACAACTGTCCTGCCTGGTTCGGATGGTCTaGGGGACCTGGGGCATGGGG +
Preference number: 4 (lower is better)
Translates to: ALRKWPWTSVMLFSQLSCLVRMV*GTWGMG
Trigger: CCCCATGCCCCAGGTCCCCCAGACCATCCGAACCAG...GCAGGACAGTTGTGAAAATAACATGACGCTCGTCCAAGGCCACTTCCTGAGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000216487.12
CDS-3UTR CCA 90 bp GTCCTGGGGAAACTAAGCTCGGGCCCTTCTTTGCAAAGACCGAGGATGGGGTGGGTCTGGGAGGGGCAGTaGGAAGGTTCTTCTTCGCAG +
Preference number: 4 (lower is better)
Translates to: VLGKLSSGPSLQRPRMGWVWEGQ*EGSSSQ
Trigger: CTGCGAAGAAGAACCTTCCCACTGCCCCTCCCAGAC...CCACCCCATCCTCGGTCTTTGCAAAGAAGGGCCCGAGCTTAGTTTCCCCAGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR CCA 90 bp ATTCTCCCCACACGATGGCTCCTGCAATCTGCCACAGCTCTGGGGCGTGTCCTGGCCATCCCCGGACTTTaGTCTTCTAAGGACACCCTC +
Preference number: 4 (lower is better)
Translates to: ILPTRWLLQSATALGRVLAIPGL*SSKDTL
Trigger: GAGGGTGTCCTTAGAAGACCAAAGTCCGGGGATGGC...CAGGACACGCCCCAGAGCTGTGGCAGATTGCAGGAGCCATCGTGTGGGGAGAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR CCA 90 bp CCGGACTTTGGTCTTCTAAGGACACCCTCTCGGAAACGCGGCGTCTGGGAGGGGTGCTGTGAGGATCGCTaGCTTTCACCTCTGTGTCCT +
Preference number: 4 (lower is better)
Translates to: PDFGLLRTPSRKRGVWEGCCEDR*LSPLCP
Trigger: AGGACACAGAGGTGAAAGCCAGCGATCCTCACAGCA...CCCCTCCCAGACGCCGCGTTTCCGAGAGGGTGTCCTTAGAAGACCAAAGTCCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555589.5
CDS-3UTR CCA 90 bp TGCAGGGGTGGAGGCCTGTCTCTTAACCGACACCCTGAGGTGCTCCTGAGATGCGTTGTTTGGCTGTCCTaGGCAGCTCTGGCATGCTGT +
Preference number: 4 (lower is better)
Translates to: CRGGGLSLNRHPEVLLRCVVWLS*AALACC
Trigger: ACAGCATGCCAGAGCTGCCCAGGACAGCCAAACAAC...GCATCTCAGGAGCACCTCAGGGTGTCGGTTAAGAGACAGGCCTCCACCCCTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR CCA 90 bp GCTCCTGCAATCTGCCACAGCTCTGGGGCGTGTCCTGTAGGGAAAGGCCCTGTTGTTGTTTGGCTGTCCTaGGCAGCTCTGGCATGCTGT +
Preference number: 4 (lower is better)
Translates to: APAICHSSGACPVGKGPVVVWLS*AALACC
Trigger: ACAGCATGCCAGAGCTGCCCAGGACAGCCAAACAAC...AACAGGGCCTTTCCCTACAGGACACGCCCCAGAGCTGTGGCAGATTGCAGGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR CCA 90 bp GCGTCATGTTATTTTCACAACTGTCCTGCGACGTTGGCCTGGGCACGTCATGGATTGGCCCTCTCTGGGTaGACCCGGCGTGGGTGTCTC +
Preference number: 4 (lower is better)
Translates to: ASCYFHNCPATLAWARHGLALSG*TRRGCL
Trigger: GAGACACCCACGCCGGGTCCACCCAGAGAGGGCCAA...TCCATGACGTGCCCAGGCCAACGTCGCAGGACAGTTGTGAAAATAACATGACGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR CCA 90 bp AACTGTCCTGCGACGTTGGCCTGGGCACGTCATGGAATGGCCCATGTCCCTCTGCCTTGCCCAGGATCATaGAGGGCTTCTTCTTCACGC +
Preference number: 4 (lower is better)
Translates to: NCPATLAWARHGMAHVPLPCPGS*RASSSR
Trigger: GCGTGAAGAAGAAGCCCTCCATGATCCTGGGCAAGG...CAGAGGGACATGGGCCATTCCATGACGTGCCCAGGCCAACGTCGCAGGACAGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR CCA 90 bp ACACCTAGGTCAGTGGTGGTGGTGGCCAGGATCACTAACTGGTTCTCCTTGAGCGCAGCATCTCCGTGCTaGAGGTCTGGCGCGCCATCA +
Preference number: 4 (lower is better)
Translates to: TPRSVVVVARITNWFSLSAASPC*RSGAPS
Trigger: TGATGGCGCGCCAGACCTCCAGCACGGAGATGCTGC...GCTCAAGGAGAACCAGTTAGTGATCCTGGCCACCACCACCACTGACCTAGGTGT
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555589.5
CDS-3UTR CCA 90 bp ATTCTCCCCACACGATGGCTCCTGCAATCTGCCACAGCTCTGGGGCGTGTCCTGGGTCAGTGGTGGTGGTaGCCAGGATCACTAACTGGT +
Preference number: 4 (lower is better)
Translates to: ILPTRWLLQSATALGRVLGQWWW*PGSLTG
Trigger: ACCAGTTAGTGATCCTGGCCACCACCACCACTGACC...CAGGACACGCCCCAGAGCTGTGGCAGATTGCAGGAGCCATCGTGTGGGGAGAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR CCA 90 bp AGGTGGCATCAGAGGTGGGCGGCAAAGGGCGTGCAGGGCAATTTCCAAGAGGTGGGTCAGTGGTGGTGGTaGCCAGGATCACTAACTGGT +
Preference number: 4 (lower is better)
Translates to: RWHQRWAAKGVQGNFQEVGQWWW*PGSLTG
Trigger: ACCAGTTAGTGATCCTGGCCACCACCACCACTGACC...CACCTCTTGGAAATTGCCCTGCACGCCCTTTGCCGCCCACCTCTGATGCCACCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555589.5
CDS-3UTR CCA 90 bp GCCCTCAGGAAGTGGCCTTGGACGAGCGTCATGTTATTTTCACAACTGTCCTGCGGCCTCACAGGAAGTTaGGCTCCCGCACCACCAGGC +
Preference number: 4 (lower is better)
Translates to: ALRKWPWTSVMLFSQLSCGLTGS*APAPPG
Trigger: GCCTGGTGGTGCGGGAGCCCAACTTCCTGTGAGGCC...GCAGGACAGTTGTGAAAATAACATGACGCTCGTCCAAGGCCACTTCCTGAGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR CCA 90 bp GCCCTCAGGAAGTGGCCTTGGACGAGCGTCATGTTATTTTCACAACTGTCCTGCTGTCCCTCTGCTGCGTaGACGTCGCGGTCGGGAGTG +
Preference number: 4 (lower is better)
Translates to: ALRKWPWTSVMLFSQLSCCPSAA*TSRSGV
Trigger: CACTCCCGACCGCGACGTCCACGCAGCAGAGGGACA...GCAGGACAGTTGTGAAAATAACATGACGCTCGTCCAAGGCCACTTCCTGAGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR TCA 90 bp ACATGCCGTCTCGGTGTCTCAGGGCTATTAGGACTTGCCCTCAGGAAGTGGCCTGGGGTAGCCGCAGTGTaGAGGGCAGTAAGTCTCTAC +
Preference number: 4 (lower is better)
Translates to: TCRLGVSGLLGLALRKWPGVAAV*RAVSLY
Trigger: GTAGAGACTTACTGCCCTTCACACTGCGGCTACCCC...AGGCCACTTCCTGAGGGCAAGTCCTAATAGCCCTGAGACACCGAGACGGCATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR TCA 90 bp ACATGCCGTCTCGGTGTCTCAGGGCTATTAGGACTTGCCCTCAGGAAGTGGCCTAGCTCTGGCATGCTGTaGGGATCGCTGGCTTTCACC +
Preference number: 4 (lower is better)
Translates to: TCRLGVSGLLGLALRKWPSSGML*GSLAFT
Trigger: GGTGAAAGCCAGCGATCCTCACAGCATGCCAGAGCT...AGGCCACTTCCTGAGGGCAAGTCCTAATAGCCCTGAGACACCGAGACGGCATGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR TCA 90 bp TGTTATTTTCACAACTGTCCTGCGACGTTGGCCTGGGCACGTCATGGAATGGCCCCTGGTCGGTGGCCATaGCAGACACCCCCAAGCTGT +
Preference number: 4 (lower is better)
Translates to: CYFHNCPATLAWARHGMAPGRWP*QTPPSC
Trigger: ACAGCTTGGGGGTGTCTGTCATGGCCACCGACCAGG...GGCCATTCCATGACGTGCCCAGGCCAACGTCGCAGGACAGTTGTGAAAATAACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR TCA 90 bp CCGAGCCTTGCCCAGGATCATGGAGGGCTTCTTCTTCACGCTGGGGCTGCTGAACTAACTGGTTCTCCTTaGGCTGCTGCAGCGAACCAT +
Preference number: 4 (lower is better)
Translates to: PSLAQDHGGLLLHAGAAELTGSP*AAAANH
Trigger: ATGGTTCGCTGCAGCAGCTCAAGGAGAACCAGTTAG...TTCAGCAGCCCCAGCGTGAAGAAGAAGCCCTCCATGATCCTGGGCAAGGCTCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555589.5
CDS-3UTR TCA 90 bp ATTCTCCCCACACGATGGCTCCTGCAATCTGCCACAGCTCTGGGGCGTGTCCTGCTAACTGGTTCTCCTTaGGCTGCTGCAGCGAACCAT +
Preference number: 4 (lower is better)
Translates to: ILPTRWLLQSATALGRVLLTGSP*AAAANH
Trigger: ATGGTTCGCTGCAGCAGCTCAAGGAGAACCAGTTAG...CAGGACACGCCCCAGAGCTGTGGCAGATTGCAGGAGCCATCGTGTGGGGAGAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR TCA 90 bp GTCCTGGGGAAACTAAGCTCGGGCCCTTCTTTGCAAAGACCGAGGATGGGGTGGGGGCCAGCACATACATaGGCACAGGCAGGAAGTCAT +
Preference number: 4 (lower is better)
Translates to: VLGKLSSGPSLQRPRMGWGPAHT*AQAGSH
Trigger: ATGACTTCCTGCCTGTGCTCATGTATGTGCTGGCCC...CCACCCCATCCTCGGTCTTTGCAAAGAAGGGCCCGAGCTTAGTTTCCCCAGGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR TCA 90 bp CCGTCTCGGTGTCTCAGGGCTATTAGGACTTGCCCTCAGGAAGTGGCCTTGGACGGGCCAGCACATACATaGGCACAGGCAGGAAGTCAT +
Preference number: 4 (lower is better)
Translates to: PSRCLRAIRTCPQEVALDGPAHT*AQAGSH
Trigger: ATGACTTCCTGCCTGTGCTCATGTATGTGCTGGCCC...GTCCAAGGCCACTTCCTGAGGGCAAGTCCTAATAGCCCTGAGACACCGAGACGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR TCA 90 bp GGGAAACTAAGCTCGGGCCCTTCTTTGCAAAGACCGAGGATGGGGTGGGTGTGGTCATGGGGAATGGCCTaGGGAGCTACGTGTGAAGAG +
Preference number: 4 (lower is better)
Translates to: GKLSSGPSLQRPRMGWVWSWGMA*GATCEE
Trigger: CTCTTCACACGTAGCTCCTCAGGCCATTCCCCATGA...CCACACCCACCCCATCCTCGGTCTTTGCAAAGAAGGGCCCGAGCTTAGTTTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR TCA 90 bp AGCGTCATGTTATTTTCACAACTGTCCTGCGACGTTGGCCTGGGCACGTCATGGACCCTGAGGTGCTCCTaGGATGCTGGGTCCACCCTG +
Preference number: 4 (lower is better)
Translates to: SVMLFSQLSCDVGLGTSWTLRCS*DAGSTL
Trigger: CAGGGTGGACCCAGCATCTCAGGAGCACCTCAGGGT...CCATGACGTGCCCAGGCCAACGTCGCAGGACAGTTGTGAAAATAACATGACGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR TCA 90 bp TGGATAGCGGGTGGCGGGCGCCAAGCTGTCTGCGAGTCCGGCACCTGCGCCTTTGACTGGTTTGAATACTaGGTCTGTATAGAGAGAGGT +
Preference number: 4 (lower is better)
Translates to: WIAGGGRQAVCESGTCAFDWFEY*VCIERG
Trigger: ACCTCTCTCTATACAGACTCAGTATTCAAACCAGTC...AAAGGCGCAGGTGCCGGACTCGCAGACAGCTTGGCGCCCGCCACCCGCTATCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556418.1
CDS-3UTR GCA 90 bp TGCTGCTCGGGCTCCAGGTACGACACGCAGATGAAGTCCTGTACGGAGGAGCGGGCAGACAAAGCCGCATaGCATCTTCCTCTTCCTCTT +
Preference number: 4 (lower is better)
Translates to: CCSGSRYDTQMKSCTEERADKAA*HLPLPL
Trigger: AAGAGGAAGAGGAAGATGGCATGCGGCTTTGTCTGC...CCGCTCCTCCGTACAGGACTTCATCTGCGTGTCGTACCTGGAGCCCGAGCAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555589.5
CDS-3UTR GCA 90 bp GTGTCTCCAAGGCCATCGCCTGTGTGCAGAGCTCAGCGTTCTCTAAGGGAGCTGGTCTCTTGGGGGCTCTaGTGGCTTCCCTCTTTCTTG +
Preference number: 4 (lower is better)
Translates to: VSPRPSPVCRAQRSLRELVSWGL*WLPSFL
Trigger: CAAGAAAGAGGGAAGCCAGCAGAGCCCCCAAGAGAC...CAGCTCCCTTAGAGAACGCTGAGCTCTGCACACAGGCGATGGCCTTGGAGACAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555589.5
CDS-3UTR GCA 90 bp CCGTCTCGGTGTCTCAGGGCTATTAGGACTTGCCCTCAGGAAGTGGCCTTGGACGTCTCTTGGGGGCTCTaGTGGCTTCCCTCTTTCTTG +
Preference number: 4 (lower is better)
Translates to: PSRCLRAIRTCPQEVALDVSWGL*WLPSFL
Trigger: CAAGAAAGAGGGAAGCCAGCAGAGCCCCCAAGAGAC...GTCCAAGGCCACTTCCTGAGGGCAAGTCCTAATAGCCCTGAGACACCGAGACGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR GCA 90 bp CGTGAGGTTGCTGCGGGCCAGCACATACATGAGCACAGGCAGGAAGTCATCCGCTGGTTCTCCTTGAGCTaGTGCAGCGAACCATCCTTG +
Preference number: 4 (lower is better)
Translates to: REVAAGQHIHEHRQEVIRWFSLS*CSEPSL
Trigger: CAAGGATGGTTCGCTGCAGCAGCTCAAGGAGAACCA...GCGGATGACTTCCTGCCTGTGCTCATGTATGTGCTGGCCCGCAGCAACCTCACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555589.5
CDS-3UTR GCA 90 bp ACACCTAGGTCAGTGGTGGTGGTGGCCAGGATCACTAACTGGTTCTCCTTGAGCCGGTGGATGGAGTCCTaGACCTCCACACTCAGCTGC +
Preference number: 4 (lower is better)
Translates to: TPRSVVVVARITNWFSLSRWMES*TSTLSC
Trigger: GCAGCTGAGTGTGGAGGTGCAGGACTCCATCCACCG...GCTCAAGGAGAACCAGTTAGTGATCCTGGCCACCACCACCACTGACCTAGGTGT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555589.5
CDS-3UTR GCA 90 bp CGTCTCCCAAACAGTGGGTGGTCCGTTTCATCCATACTCTGCCTGGCTCAGCATCGGTGGATGGAGTCCTaGACCTCCACACTCAGCTGC +
Preference number: 4 (lower is better)
Translates to: RLPNSGWSVSSILCLAQHRWMES*TSTLSC
Trigger: GCAGCTGAGTGTGGAGGTGCAGGACTCCATCCACCG...ATGCTGAGCCAGGCAGAGTATGGATGAAACGGACCACCCACTGTTTGGGAGACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556418.1
CDS-3UTR GCA 90 bp TCTCCCCACACGATGGCTCCTGCAATCTGCCACAGCTCTGGGGCGTGTCCTGTAAGGGCTATTAGGACTTaGCCTCAGGAAGTGGCCTTG +
Preference number: 4 (lower is better)
Translates to: SPHTMAPAICHSSGACPVRAIRT*PQEVAL
Trigger: CAAGGCCACTTCCTGAGGGCAAGTCCTAATAGCCCT...TACAGGACACGCCCCAGAGCTGTGGCAGATTGCAGGAGCCATCGTGTGGGGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR GCA 90 bp GCAGCCAGTGAACTGGGCTGGGCATGTTTGGGGAACTGGGGGCAGCTGGATTTGACCCTTGGCAGCTGCTaGATTTGTCCAGGGACTAAG +
Preference number: 4 (lower is better)
Translates to: AASELGWACLGNWGQLDLTLGSC*ICPGTK
Trigger: CTTAGTCCCTGGACAAATGCAGCAGCTGCCAAGGGT...CAAATCCAGCTGCCCCCAGTTCCCCAAACATGCCCAGCCCAGTTCACTGGCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000556418.1
CDS-3UTR GCA 90 bp TTGGCCATGGAGGACTCACACCATGGAAATGGACAGAAGCTAAAATCAGAGCTTCCCGGGGCTCAGGGCTaGAGGCAGAGAGGCTGCGCG +
Preference number: 4 (lower is better)
Translates to: LAMEDSHHGNGQKLKSELPGAQG*RQRGCA
Trigger: CGCGCAGCCTCTCTGCCTGCAGCCCTGAGCCCCGGG...AAGCTCTGATTTTAGCTTCTGTCCATTTCCATGGTGTGAGTCCTCCATGGCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556418.1
CDS-3UTR CCA 90 bp AGACAAGAGGAAGTGGATCACACTAGGTCATCTCTGGGGAAAATGAGAAGCCGGGCGCCCGCATGTCCCTaGCTCTGGCCCTCTGGAAGG +
Preference number: 4 (lower is better)
Translates to: RQEEVDHTRSSLGKMRSRAPACP*LWPSGR
Trigger: CCTTCCAGAGGGCCAGAGCCAGGGACATGCGGGCGC...CCGGCTTCTCATTTTCCCCAGAGATGACCTAGTGTGATCCACTTCCTCTTGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557762.1
CDS-3UTR CCA 90 bp GCCCTCAGGAAGTGGCCTTGGACGAGCGTCATGTTATTTTCACAACTGTCCTGCTGCTGGCCTCAAGGATaGCCTGGGGTAGCCGCAGTG +
Preference number: 4 (lower is better)
Translates to: ALRKWPWTSVMLFSQLSCCWPQG*PGVAAV
Trigger: CACTGCGGCTACCCCAGGCCATCCTTGAGGCCAGCA...GCAGGACAGTTGTGAAAATAACATGACGCTCGTCCAAGGCCACTTCCTGAGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR CCA 90 bp GTGGTCACACCTAGGTCAGTGGTGGTGGTGGCCAGGATCACTAACTGGTTCTCCTTCACCTCTGTGTCCTaGCCTTGCTCCGTGCTCTCC +
Preference number: 4 (lower is better)
Translates to: VVTPRSVVVVARITNWFSFTSVS*PCSVLS
Trigger: GGAGAGCACGGAGCAAGGCCAGGACACAGAGGTGAA...GGAGAACCAGTTAGTGATCCTGGCCACCACCACCACTGACCTAGGTGTGACCAC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555589.5
CDS-3UTR CCA 90 bp GCTCCTGCAATCTGCCACAGCTCTGGGGCGTGTCCTGTAGGGAAAGGCCCTGTTTGCTGTGAGGATCGCTaGCTTTCACCTCTGTGTCCT +
Preference number: 4 (lower is better)
Translates to: APAICHSSGACPVGKGPVCCEDR*LSPLCP
Trigger: AGGACACAGAGGTGAAAGCCAGCGATCCTCACAGCA...AACAGGGCCTTTCCCTACAGGACACGCCCCAGAGCTGTGGCAGATTGCAGGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR CCA 90 bp GTGGTCACACCTAGGTCAGTGGTGGTGGTGGCCAGGATCACTAACTGGTTCTCCAACTCTGGAGAGCTCTaGGAATGGGCAGTGGCCTGG +
Preference number: 4 (lower is better)
Translates to: VVTPRSVVVVARITNWFSNSGEL*EWAVAW
Trigger: CCAGGCCACTGCCCATTCCCAGAGCTCTCCAGAGTT...GGAGAACCAGTTAGTGATCCTGGCCACCACCACCACTGACCTAGGTGTGACCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555589.5
CDS-3UTR CCA 90 bp CGTCTCCCAAACAGTGGGTGGTCCGTTTCATCCATACTCTGCCTGGCTCAGCATCCTCCTCCGTGCTGCTaGTGGAGTAGGAGTCCTGGT +
Preference number: 4 (lower is better)
Translates to: RLPNSGWSVSSILCLAQHPPPCC*WSRSPG
Trigger: ACCAGGACTCCTACTCCACCAGCAGCACGGAGGAGG...ATGCTGAGCCAGGCAGAGTATGGATGAAACGGACCACCCACTGTTTGGGAGACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556418.1
CDS-3UTR CCA 90 bp CCTGCACCCCAGGCGCAATGCTGGGCACGGAGGGCAGCACAGATAAGAAGGGAGTTGGAGAGGAAAGCGTaGAACATGCTGCTGAAACTG +
Preference number: 4 (lower is better)
Translates to: PAPQAQCWARRAAQIRRELERKA*NMLLKL
Trigger: CAGTTTCAGCAGCATGTTCCACGCTTTCCTCTCCAA...CTCCCTTCTTATCTGTGCTGCCCTCCGTGCCCAGCATTGCGCCTGGGGTGCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556418.1
CDS-3UTR CCA 90 bp TGTTATTTTCACAACTGTCCTGCGACGTTGGCCTGGGCACGTCATGGAATGGCCTCCGTGCTGGAGGTCTaGCGCGCCATCATCTCCAGG +
Preference number: 4 (lower is better)
Translates to: CYFHNCPATLAWARHGMASVLEV*RAIISR
Trigger: CCTGGAGATGATGGCGCGCCAGACCTCCAGCACGGA...GGCCATTCCATGACGTGCCCAGGCCAACGTCGCAGGACAGTTGTGAAAATAACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR CCA 90 bp CGTCTCGGTGTCTCAGGGCTATTAGGACTTGCCCTCAGGAAGTGGCCTTGGACGTCACACCTAGGTCAGTaGTGGTGGTGGCCAGGATCA +
Preference number: 4 (lower is better)
Translates to: RLGVSGLLGLALRKWPWTSHLGQ*WWWPGS
Trigger: TGATCCTGGCCACCACCACCACTGACCTAGGTGTGA...CGTCCAAGGCCACTTCCTGAGGGCAAGTCCTAATAGCCCTGAGACACCGAGACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR CCA 90 bp TGTTATTTTCACAACTGTCCTGCGACGTTGGCCTGGGCACGTCATGGAATGGCCGCACCTCCGGCACGCTaGTGGTCACACCTAGGTCAG +
Preference number: 4 (lower is better)
Translates to: CYFHNCPATLAWARHGMAAPPAR*WSHLGQ
Trigger: CTGACCTAGGTGTGACCACCAGCGTGCCGGAGGTGC...GGCCATTCCATGACGTGCCCAGGCCAACGTCGCAGGACAGTTGTGAAAATAACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR CCA 90 bp TGTTATTTTCACAACTGTCCTGCGACGTTGGCCTGGGCACGTCATGGAATGGCCAGTGGAAGTCGCGCTTaGGCTCGCTGCGCAGCAGGT +
Preference number: 4 (lower is better)
Translates to: CYFHNCPATLAWARHGMASGSRA*ARCAAG
Trigger: ACCTGCTGCGCAGCGAGCCCAAGCGCGACTTCCACT...GGCCATTCCATGACGTGCCCAGGCCAACGTCGCAGGACAGTTGTGAAAATAACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR CCA 90 bp CCTGAGCCTCAGTTTCCCTTTCCGTCTAATGAAGAACATGCCGTCTCGGTGTCTCACGGGGAGCAGCTGTaGCCGGTGCTCCTTCCTAGG +
Preference number: 4 (lower is better)
Translates to: PEPQFPFPSNEEHAVSVSHGEQL*PVLLPR
Trigger: CCTAGGAAGGAGCACCGGCCACAGCTGCTCCCCGTG...AGACACCGAGACGGCATGTTCTTCATTAGACGGAAAGGGAAACTGAGGCTCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR CCA 90 bp CCTGAGCCTCAGTTTCCCTTTCCGTCTAATGAAGAACATGCCGTCTCGGTGTCTCAGAGCTGCGGGGTCTaGGGGCACCGGGAGCTAAGA +
Preference number: 4 (lower is better)
Translates to: PEPQFPFPSNEEHAVSVSQSCGV*GHRELR
Trigger: TCTTAGCTCCCGGTGCCCCCAGACCCCGCAGCTCTG...AGACACCGAGACGGCATGTTCTTCATTAGACGGAAAGGGAAACTGAGGCTCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR CCA 90 bp TGTTATTTTCACAACTGTCCTGCGACGTTGGCCTGGGCACGTCATGGAATGGCCCCGTGCTTGGCGCCCTaGCGTGTGTCTAGCTGCTTC +
Preference number: 4 (lower is better)
Translates to: CYFHNCPATLAWARHGMAPCLAP*RVSSCF
Trigger: GAAGCAGCTAGACACACGCCAGGGCGCCAAGCACGG...GGCCATTCCATGACGTGCCCAGGCCAACGTCGCAGGACAGTTGTGAAAATAACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR CCA 90 bp GGCTTCTCAGAGGAGGGGCTGTTGGAGAAACTGAGTCGTCTTAAAGGATGGGCAGCCCTTCCTCTGGTGTaGGGAGTCTCACTGCTCCCC +
Preference number: 4 (lower is better)
Translates to: GFSEEGLLEKLSRLKGWAALPLV*GVSLLP
Trigger: GGGGAGCAGTGAGACTCCCCACACCAGAGGAAGGGC...TGCCCATCCTTTAAGACGACTCAGTTTCTCCAACAGCCCCTCCTCTGAGAAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556418.1
3UTR CAA 72 bp TACGAGCCCTTGTCCTGCGCCAGCTCCACCACCTTCTaGTACAGCTTGCGGTTGTTGGAGAGGAAAGCGTGG +
Preference number: 4 (lower is better)
Translates to: YEPLSCASSTTF*YSLRLLERKAW
Trigger: CCACGCTTTCCTCTCCAACAACCGCAAGCTGTACAAGAAGGTGGTGGAGCTGGCGCAGGACAAGGGCTCGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555589.5
CDS-3UTR TCA 90 bp AACTGTCCTGCGACGTTGGCCTGGGCACGTCATGGAATGGCCCATGTCCCTCTGGATCTGATGCAGGCATaGGTTGATGGCTTCCTTCAG +
Preference number: 4 (lower is better)
Translates to: NCPATLAWARHGMAHVPLDLMQA*VDGFLQ
Trigger: CTGAAGGAAGCCATCAACTCATGCCTGCATCAGATC...CAGAGGGACATGGGCCATTCCATGACGTGCCCAGGCCAACGTCGCAGGACAGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR TCA 90 bp TCACAACTGTCCTGCGACGTTGGCCTGGGCACGTCATGGAATGGCCCATGTCCCCCTTGTGCATGCTGGTaGACTTCTGCAGGATCTTCT +
Preference number: 4 (lower is better)
Translates to: SQLSCDVGLGTSWNGPCPPCACW*TSAGSS
Trigger: AGAAGATCCTGCAGAAGTTCACCAGCATGCACAAGG...GGGACATGGGCCATTCCATGACGTGCCCAGGCCAACGTCGCAGGACAGTTGTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR TCA 90 bp GTGCTGGAGCTGGCTCACACCCGCCAGGGAGAGCCGACTGCATACACTTCTTTCCCTTGTGCATGCTGGTaGACTTCTGCAGGATCTTCT +
Preference number: 4 (lower is better)
Translates to: VLELAHTRQGEPTAYTSFPCACW*TSAGSS
Trigger: AGAAGATCCTGCAGAAGTTCACCAGCATGCACAAGG...GAAAGAAGTGTATGCAGTCGGCTCTCCCTGGCGGGTGTGAGCCAGCTCCAGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556418.1
CDS-3UTR TCA 90 bp GAGAGGAAAGCGTGGAACATGCTGCTGAAACTGGCAAAGCTCAGCCGGTGCCGAGGGCCAGCACATACATaGGCACAGGCAGGAAGTCAT +
Preference number: 4 (lower is better)
Translates to: ERKAWNMLLKLAKLSRCRGPAHT*AQAGSH
Trigger: ATGACTTCCTGCCTGTGCTCATGTATGTGCTGGCCC...TCGGCACCGGCTGAGCTTTGCCAGTTTCAGCAGCATGTTCCACGCTTTCCTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555589.5
CDS-3UTR TCA 90 bp GCTCCACCACCTTCTTGTACAGCTTGCGGTTGTTGGAGAGGAAAGCGTGGAACAGCAGGGCGGGGTCCATaGGCTCCATCATGTACTCCA +
Preference number: 4 (lower is better)
Translates to: APPPSCTACGCWRGKRGTAGRGP*APSCTP
Trigger: TGGAGTACATGATGGAGCTCATGGACCCCGCCCTGC...TGTTCCACGCTTTCCTCTCCAACAACCGCAAGCTGTACAAGAAGGTGGTGGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555589.5
CDS-3UTR TCA 90 bp AGACAAGAGGAAGTGGATCACACTAGGTCATCTCTGGGGAAAATGAGAAGCCGGAAAATGAGAAGCCGGTaGGGCCAGCGCCCTGGCCCC +
Preference number: 4 (lower is better)
Translates to: RQEEVDHTRSSLGKMRSRKMRSR*GQRPGP
Trigger: GGGGCCAGGGCGCTGGCCTCACCGGCTTCTCATTTT...CCGGCTTCTCATTTTCCCCAGAGATGACCTAGTGTGATCCACTTCCTCTTGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000557762.1
CDS-3UTR TCA 90 bp CCTCCCTGGATGGATAGCGGGTGGCGGGCGCCAAGCTGTCTGCGAGTCCGGCACAGTCAGTTATTAAATTaGTTAGCCATAGTCAGCCTG +
Preference number: 4 (lower is better)
Translates to: PPWMDSGWRAPSCLRVRHSQLLN*LAIVSL
Trigger: CAGGCTGACTATGGCTAATCAATTTAATAACTGACT...GTGCCGGACTCGCAGACAGCTTGGCGCCCGCCACCCGCTATCCATCCAGGGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556418.1
CDS-3UTR GCA 90 bp GAGAGGAAAGCGTGGAACATGCTGCTGAAACTGGCAAAGCTCAGCCGGTGCCGATTCACAGGCACAGTTTaGGTCATGGGCTGTGGGCCT +
Preference number: 4 (lower is better)
Translates to: ERKAWNMLLKLAKLSRCRFTGTV*VMGCGP
Trigger: AGGCCCACAGCCCATGACGCAAACTGTGCCTGTGAA...TCGGCACCGGCTGAGCTTTGCCAGTTTCAGCAGCATGTTCCACGCTTTCCTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555589.5
CDS-3UTR GCA 90 bp GCCCTCAGGAAGTGGCCTTGGACGAGCGTCATGTTATTTTCACAACTGTCCTGCGCTCCTCCTCCGTGCTaGTGGTGGAGTAGGAGTCCT +
Preference number: 4 (lower is better)
Translates to: ALRKWPWTSVMLFSQLSCAPPPC*WWSRSP
Trigger: AGGACTCCTACTCCACCAGCAGCACGGAGGAGGAGC...GCAGGACAGTTGTGAAAATAACATGACGCTCGTCCAAGGCCACTTCCTGAGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR GCA 90 bp GGCTTCTCAGAGGAGGGGCTGTTGGAGAAACTGAGTCGTCTTAAAGGATGGGCACCAGCTCCTCCTCCGTaGTGCTGGTGGAGTAGGAGT +
Preference number: 4 (lower is better)
Translates to: GFSEEGLLEKLSRLKGWAPAPPP*CWWSRS
Trigger: ACTCCTACTCCACCAGCAGCACGGAGGAGGAGCTGG...TGCCCATCCTTTAAGACGACTCAGTTTCTCCAACAGCCCCTCCTCTGAGAAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556418.1
CDS-3UTR GCA 90 bp ATGCTGCTGAAACTGGCAAAGCTCAGCCGGTGCCGAGCCTTGCCCAGGATCATGTTCTCCTTGAGCTGCTaGAGCGAACCATCCTTGCTG +
Preference number: 4 (lower is better)
Translates to: MLLKLAKLSRCRALPRIMFSLSC*SEPSLL
Trigger: CAGCAAGGATGGTTCGCTGCAGCAGCTCAAGGAGAA...CATGATCCTGGGCAAGGCTCGGCACCGGCTGAGCTTTGCCAGTTTCAGCAGCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555589.5
CDS-3UTR GCA 90 bp GTCCTGGGGAAACTAAGCTCGGGCCCTTCTTTGCAAAGACCGAGGATGGGGTGGTGGTTCTCCTTGAGCTaGTGCAGCGAACCATCCTTG +
Preference number: 4 (lower is better)
Translates to: VLGKLSSGPSLQRPRMGWWFSLS*CSEPSL
Trigger: CAAGGATGGTTCGCTGCAGCAGCTCAAGGAGAACCA...CCACCCCATCCTCGGTCTTTGCAAAGAAGGGCCCGAGCTTAGTTTCCCCAGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR GCA 90 bp GTCCTGGGGAAACTAAGCTCGGGCCCTTCTTTGCAAAGACCGAGGATGGGGTGGAGGGCTATTAGGACTTaGCCTCAGGAAGTGGCCTTG +
Preference number: 4 (lower is better)
Translates to: VLGKLSSGPSLQRPRMGWRAIRT*PQEVAL
Trigger: CAAGGCCACTTCCTGAGGGCAAGTCCTAATAGCCCT...CCACCCCATCCTCGGTCTTTGCAAAGAAGGGCCCGAGCTTAGTTTCCCCAGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR GCA 90 bp TGTTATTTTCACAACTGTCCTGCGACGTTGGCCTGGGCACGTCATGGAATGGCCGAGGTGCTCCTGAGATaGTGGGTCCACCCTGAGTGG +
Preference number: 4 (lower is better)
Translates to: CYFHNCPATLAWARHGMAEVLLR*WVHPEW
Trigger: CCACTCAGGGTGGACCCAGCATCTCAGGAGCACCTC...GGCCATTCCATGACGTGCCCAGGCCAACGTCGCAGGACAGTTGTGAAAATAACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR GCA 90 bp AGCGTCATGTTATTTTCACAACTGTCCTGCGACGTTGGCCTGGGCACGTCATGGAAGAGCAGGCTCTGGTaGAGGGGTGGAGGCCTGTCT +
Preference number: 4 (lower is better)
Translates to: SVMLFSQLSCDVGLGTSWKSRLW*RGGGLS
Trigger: AGACAGGCCTCCACCCCTGCACCAGAGCCTGCTCTT...CCATGACGTGCCCAGGCCAACGTCGCAGGACAGTTGTGAAAATAACATGACGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR CCA 90 bp GGCTGTACACCTTGTAGTCCTGCACCAGGCTGCCAAAGTACGAGCCCTTGTCCTGTTTTTCGGGTTGGCTaGCAGACAAAGCCGCATGCC +
Preference number: 4 (lower is better)
Translates to: GCTPCSPAPGCQSTSPCPVFRVG*QTKPHA
Trigger: GGCATGCGGCTTTGTCTGCCAGCCAACCCGAAAAAC...AGGACAAGGGCTCGTACTTTGGCAGCCTGGTGCAGGACTACAAGGTGTACAGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555589.5
CDS-3UTR CCA 90 bp GAGAGGAAAGCGTGGAACATGCTGCTGAAACTGGCAAAGCTCAGCCGGTGCCGAGGCAGTTTTTCGGGTTaGCTGGCAGACAAAGCCGCA +
Preference number: 4 (lower is better)
Translates to: ERKAWNMLLKLAKLSRCRGSFSG*LADKAA
Trigger: TGCGGCTTTGTCTGCCAGCCAACCCGAAAAACTGCC...TCGGCACCGGCTGAGCTTTGCCAGTTTCAGCAGCATGTTCCACGCTTTCCTCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555589.5
CDS-3UTR CCA 90 bp TGCAGGGGTGGAGGCCTGTCTCTTAACCGACACCCTGAGGTGCTCCTGAGATGCCTTCCCTCTTTCTTGTaGAGGATTCAGCGAGGAGTC +
Preference number: 4 (lower is better)
Translates to: CRGGGLSLNRHPEVLLRCLPSFL*RIQRGV
Trigger: GACTCCTCGCTGAATCCTCCACAAGAAAGAGGGAAG...GCATCTCAGGAGCACCTCAGGGTGTCGGTTAAGAGACAGGCCTCCACCCCTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR CCA 90 bp TGTTATTTTCACAACTGTCCTGCGACGTTGGCCTGGGCACGTCATGGAATGGCCGCAATTTCCAAGAGGTaGCTGGTCGGTGGGCAGGGC +
Preference number: 4 (lower is better)
Translates to: CYFHNCPATLAWARHGMAAISKR*LVGGQG
Trigger: GCCCTGCCCACCGACCAGCCACCTCTTGGAAATTGC...GGCCATTCCATGACGTGCCCAGGCCAACGTCGCAGGACAGTTGTGAAAATAACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR CCA 90 bp AGTTTCCCTTTCCGTCTAATGAAGAACATGCCGTCTCGGTGTCTCAGGGCTATTGGCGGCTGGTTCGGATaGTCTGGGGGACCTGGGGCA +
Preference number: 4 (lower is better)
Translates to: SFPFRLMKNMPSRCLRAIGGWFG*SGGPGA
Trigger: TGCCCCAGGTCCCCCAGACCATCCGAACCAGCCGCC...AATAGCCCTGAGACACCGAGACGGCATGTTCTTCATTAGACGGAAAGGGAAACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000216487.12
CDS-3UTR CCA 90 bp GCGTCATGTTATTTTCACAACTGTCCTGCGACGTTGGCCTGGGCACGTCATGGAGCCTGCAGTGGGGCATaGGAGTCTCTCGCAGGTCAT +
Preference number: 4 (lower is better)
Translates to: ASCYFHNCPATLAWARHGACSGA*ESLAGH
Trigger: ATGACCTGCGAGAGACTCCCATGCCCCACTGCAGGC...TCCATGACGTGCCCAGGCCAACGTCGCAGGACAGTTGTGAAAATAACATGACGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216487.12
CDS-3UTR CCA 90 bp TCATGTTATTTTCACAACTGTCCTGCGACGTTGGCCTGGGCACGTCATGGAATGTGGGTGGACCCGGCGTaGGTGTCTCCAAGGCCATCG +
Preference number: 4 (lower is better)
Translates to: SCYFHNCPATLAWARHGMWVDPA*VSPRPS
Trigger: CGATGGCCTTGGAGACACCCACGCCGGGTCCACCCA...CATTCCATGACGTGCCCAGGCCAACGTCGCAGGACAGTTGTGAAAATAACATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR CCA 90 bp GCGTCATGTTATTTTCACAACTGTCCTGCGACGTTGGCCTGGGCACGTCATGGACCTCCTCCGTGCTGCTaGTGGAGTAGGAGTCCTGGT +
Preference number: 4 (lower is better)
Translates to: ASCYFHNCPATLAWARHGPPPCC*WSRSPG
Trigger: ACCAGGACTCCTACTCCACCAGCAGCACGGAGGAGG...TCCATGACGTGCCCAGGCCAACGTCGCAGGACAGTTGTGAAAATAACATGACGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR CCA 90 bp CCTGAGCCTCAGTTTCCCTTTCCGTCTAATGAAGAACATGCCGTCTCGGTGTCTGCAGCATCTCCGTGCTaGAGGTCTGGCGCGCCATCA +
Preference number: 4 (lower is better)
Translates to: PEPQFPFPSNEEHAVSVSAASPC*RSGAPS
Trigger: TGATGGCGCGCCAGACCTCCAGCACGGAGATGCTGC...AGACACCGAGACGGCATGTTCTTCATTAGACGGAAAGGGAAACTGAGGCTCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR CCA 90 bp CCTGAGCCTCAGTTTCCCTTTCCGTCTAATGAAGAACATGCCGTCTCGGTGTCTCCCATAGGGCTTCCCTaGGTTGCCGAGGGCCATGGA +
Preference number: 4 (lower is better)
Translates to: PEPQFPFPSNEEHAVSVSPIGLP*VAEGHG
Trigger: TCCATGGCCCTCGGCAACCCAGGGAAGCCCTATGGG...AGACACCGAGACGGCATGTTCTTCATTAGACGGAAAGGGAAACTGAGGCTCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR CCA 90 bp GGCTTCTCAGAGGAGGGGCTGTTGGAGAAACTGAGTCGTCTTAAAGGATGGGCAGACGCACCCAAGTCCTaGACACACACTGGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: GFSEEGLLEKLSRLKGWADAPKS*THTGSR
Trigger: CCTGCTGCCAGTGTGTGTCCAGGACTTGGGTGCGTC...TGCCCATCCTTTAAGACGACTCAGTTTCTCCAACAGCCCCTCCTCTGAGAAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556418.1
CDS-3UTR TCA 90 bp GCCCTCAGGAAGTGGCCTTGGACGAGCGTCATGTTATTTTCACAACTGTCCTGCAGCTCTGGCATGCTGTaGGGATCGCTGGCTTTCACC +
Preference number: 4 (lower is better)
Translates to: ALRKWPWTSVMLFSQLSCSSGML*GSLAFT
Trigger: GGTGAAAGCCAGCGATCCTCACAGCATGCCAGAGCT...GCAGGACAGTTGTGAAAATAACATGACGCTCGTCCAAGGCCACTTCCTGAGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR TCA 90 bp AGCGTCATGTTATTTTCACAACTGTCCTGCGACGTTGGCCTGGGCACGTCATGGCTGAGGAGCTACGTGTaGAGAGGGCGCCGGTTTGTT +
Preference number: 4 (lower is better)
Translates to: SVMLFSQLSCDVGLGTSWLRSYV*RGRRFV
Trigger: AACAAACCGGCGCCCTCTTCACACGTAGCTCCTCAG...CCATGACGTGCCCAGGCCAACGTCGCAGGACAGTTGTGAAAATAACATGACGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR TCA 90 bp GCCCTCAGGAAGTGGCCTTGGACGAGCGTCATGTTATTTTCACAACTGTCCTGCCTGAGGAGCTACGTGTaGAGAGGGCGCCGGTTTGTT +
Preference number: 4 (lower is better)
Translates to: ALRKWPWTSVMLFSQLSCLRSYV*RGRRFV
Trigger: AACAAACCGGCGCCCTCTTCACACGTAGCTCCTCAG...GCAGGACAGTTGTGAAAATAACATGACGCTCGTCCAAGGCCACTTCCTGAGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR TCA 90 bp TCACACAGCAAGCTAGTACAGGGCTGGGGCCAGAACTCAAGCCTCCTGTCTCCCGGCTGTTGGAGAAACTaGGTCGTCTTAAAGGATGGG +
Preference number: 4 (lower is better)
Translates to: SHSKLVQGWGQNSSLLSPGCWRN*VVLKDG
Trigger: CCCATCCTTTAAGACGACTCAGTTTCTCCAACAGCC...GGGAGACAGGAGGCTTGAGTTCTGGCCCCAGCCCTGTACTAGCTTGCTGTGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556418.1
CDS-3UTR TCA 90 bp CGTCTCCCAAACAGTGGGTGGTCCGTTTCATCCATACTCTGCCTGGCTCAGCATTGGGTGTCAGAGGAGTaGGTCTGCATAGCTGCTCAC +
Preference number: 4 (lower is better)
Translates to: RLPNSGWSVSSILCLAQHWVSEE*VCIAAH
Trigger: GTGAGCAGCTATGCAGACTCACTCCTCTGACACCCA...ATGCTGAGCCAGGCAGAGTATGGATGAAACGGACCACCCACTGTTTGGGAGACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556418.1
CDS-3UTR GCA 90 bp GGGAAACTAAGCTCGGGCCCTTCTTTGCAAAGACCGAGGATGGGGTGGGTGTGGGCAGACAAAGCCGCATaGCATCTTCCTCTTCCTCTT +
Preference number: 4 (lower is better)
Translates to: GKLSSGPSLQRPRMGWVWADKAA*HLPLPL
Trigger: AAGAGGAAGAGGAAGATGGCATGCGGCTTTGTCTGC...CCACACCCACCCCATCCTCGGTCTTTGCAAAGAAGGGCCCGAGCTTAGTTTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR GCA 90 bp GATGGCTTCCTTCAGGGGCTTCAGGACACATTTGTACAAGGCAGACTCTACAATTCTGTGTCCTGGCCTTaGTCCGTGCTCTCCCGGGGC +
Preference number: 4 (lower is better)
Translates to: DGFLQGLQDTFVQGRLYNSVSWP*SVLSRG
Trigger: GCCCCGGGAGAGCACGGAGCAAGGCCAGGACACAGA...ATTGTAGAGTCTGCCTTGTACAAATGTGTCCTGAAGCCCCTGAAGGAAGCCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555589.5
CDS-3UTR GCA 90 bp TGCAGGGGTGGAGGCCTGTCTCTTAACCGACACCCTGAGGTGCTCCTGAGATGCCCTTCTTGTACAGCTTaGGGTTGTTGGAGAGGAAAG +
Preference number: 4 (lower is better)
Translates to: CRGGGLSLNRHPEVLLRCPSCTA*GCWRGK
Trigger: CTTTCCTCTCCAACAACCGCAAGCTGTACAAGAAGG...GCATCTCAGGAGCACCTCAGGGTGTCGGTTAAGAGACAGGCCTCCACCCCTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR GCA 90 bp AACTGGCAAAGCTCAGCCGGTGCCGAGCCTTGCCCAGGATCATGGAGGGCTTCTCCTTCTTGTACAGCTTaGGGTTGTTGGAGAGGAAAG +
Preference number: 4 (lower is better)
Translates to: NWQSSAGAEPCPGSWRASPSCTA*GCWRGK
Trigger: CTTTCCTCTCCAACAACCGCAAGCTGTACAAGAAGG...AGAAGCCCTCCATGATCCTGGGCAAGGCTCGGCACCGGCTGAGCTTTGCCAGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555589.5
CDS-3UTR GCA 90 bp AACTGTCCTGCGACGTTGGCCTGGGCACGTCATGGAATGGCCCATGTCCCTCTGCCTTCTTGTACAGCTTaGGGTTGTTGGAGAGGAAAG +
Preference number: 4 (lower is better)
Translates to: NCPATLAWARHGMAHVPLPSCTA*GCWRGK
Trigger: CTTTCCTCTCCAACAACCGCAAGCTGTACAAGAAGG...CAGAGGGACATGGGCCATTCCATGACGTGCCCAGGCCAACGTCGCAGGACAGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR GCA 90 bp ACATGCCGTCTCGGTGTCTCAGGGCTATTAGGACTTGCCCTCAGGAAGTGGCCTGCTGGGTCATCATGGTaGGAATCTCCTGCAGCATCT +
Preference number: 4 (lower is better)
Translates to: TCRLGVSGLLGLALRKWPAGSSW*ESPAAS
Trigger: AGATGCTGCAGGAGATTCGCACCATGATGACCCAGC...AGGCCACTTCCTGAGGGCAAGTCCTAATAGCCCTGAGACACCGAGACGGCATGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR GCA 90 bp GGTGGCATCAGAGGTGGGCGGCAAAGGGCGTGCAGGGCAATTTCCAAGAGGTGGATGCTGGTGAACTTCTaGAGGATCTTCTCCATCATG +
Preference number: 4 (lower is better)
Translates to: GGIRGGRQRACRAISKRWMLVNF*RIFSIM
Trigger: CATGATGGAGAAGATCCTGCAGAAGTTCACCAGCAT...CCACCTCTTGGAAATTGCCCTGCACGCCCTTTGCCGCCCACCTCTGATGCCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555589.5
CDS-3UTR GCA 90 bp TTGGCCATGGAGGACTCACACCATGGAAATGGACAGAAGCTAAAATCAGAGCTTGAACCCTCCCCCAGCTaGAGGGCGGGGTCCATGAGC +
Preference number: 4 (lower is better)
Translates to: LAMEDSHHGNGQKLKSELEPSPS*RAGSMS
Trigger: GCTCATGGACCCCGCCCTGCAGCTGGGGGAGGGTTC...AAGCTCTGATTTTAGCTTCTGTCCATTTCCATGGTGTGAGTCCTCCATGGCCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000556418.1
CDS-3UTR GCA 90 bp GCGTCATGTTATTTTCACAACTGTCCTGCGACGTTGGCCTGGGCACGTCATGGAACCTCCACACTCAGCTaGCGGGTCACCGTGATCTTG +
Preference number: 4 (lower is better)
Translates to: ASCYFHNCPATLAWARHGTSTLS*RVTVIL
Trigger: CAAGATCACGGTGACCCGGCAGCTGAGTGTGGAGGT...TCCATGACGTGCCCAGGCCAACGTCGCAGGACAGTTGTGAAAATAACATGACGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR GCA 90 bp AGCGTCATGTTATTTTCACAACTGTCCTGCGACGTTGGCCTGGGCACGTCATGGGCTCGGGCCCTTCTTTaGAAAGACCGAGGATGGGGT +
Preference number: 4 (lower is better)
Translates to: SVMLFSQLSCDVGLGTSWARALL*KDRGWG
Trigger: ACCCCATCCTCGGTCTTTGCAAAGAAGGGCCCGAGC...CCATGACGTGCCCAGGCCAACGTCGCAGGACAGTTGTGAAAATAACATGACGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR GCA 90 bp AAGTGGCCTTGGACGAGCGTCATGTTATTTTCACAACTGTCCTGCGACGTTGGCGAGGTGCTCCTGAGATaGTGGGTCCACCCTGAGTGG +
Preference number: 4 (lower is better)
Translates to: KWPWTSVMLFSQLSCDVGEVLLR*WVHPEW
Trigger: CCACTCAGGGTGGACCCAGCATCTCAGGAGCACCTC...GCCAACGTCGCAGGACAGTTGTGAAAATAACATGACGCTCGTCCAAGGCCACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR GCA 90 bp CCTGAGCCTCAGTTTCCCTTTCCGTCTAATGAAGAACATGCCGTCTCGGTGTCTAAGAGCAGGCTCTGGTaGAGGGGTGGAGGCCTGTCT +
Preference number: 4 (lower is better)
Translates to: PEPQFPFPSNEEHAVSVSKSRLW*RGGGLS
Trigger: AGACAGGCCTCCACCCCTGCACCAGAGCCTGCTCTT...AGACACCGAGACGGCATGTTCTTCATTAGACGGAAAGGGAAACTGAGGCTCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR GCA 90 bp AGCGTCATGTTATTTTCACAACTGTCCTGCGACGTTGGCCTGGGCACGTCATGGCCACACGATGGCTCCTaGAATCTGCCACAGCTCTGG +
Preference number: 4 (lower is better)
Translates to: SVMLFSQLSCDVGLGTSWPHDGS*NLPQLW
Trigger: CCAGAGCTGTGGCAGATTGCAGGAGCCATCGTGTGG...CCATGACGTGCCCAGGCCAACGTCGCAGGACAGTTGTGAAAATAACATGACGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR GCA 90 bp GGCTTCTCAGAGGAGGGGCTGTTGGAGAAACTGAGTCGTCTTAAAGGATGGGCACTCCGTCTTAGTGGCTaGCTCAGGGCTCCTTGTCCT +
Preference number: 4 (lower is better)
Translates to: GFSEEGLLEKLSRLKGWALRLSG*LRAPCP
Trigger: AGGACAAGGAGCCCTGAGGCAGCCACTAAGACGGAG...TGCCCATCCTTTAAGACGACTCAGTTTCTCCAACAGCCCCTCCTCTGAGAAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556418.1
CDS-3UTR CCA 90 bp GCGTCATGTTATTTTCACAACTGTCCTGCGACGTTGGCCTGGGCACGTCATGGAAACCCAGACCCAGGTTaGCGATGGTCTCAAGGTCCG +
Preference number: 4 (lower is better)
Translates to: ASCYFHNCPATLAWARHGNPDPG*RWSQGP
Trigger: CGGACCTTGAGACCATCGCCAACCTGGGTCTGGGTT...TCCATGACGTGCCCAGGCCAACGTCGCAGGACAGTTGTGAAAATAACATGACGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR CCA 90 bp AAGTGGCCTTGGACGAGCGTCATGTTATTTTCACAACTGTCCTGCGACGTTGGCGCAATTTCCAAGAGGTaGCTGGTCGGTGGGCAGGGC +
Preference number: 4 (lower is better)
Translates to: KWPWTSVMLFSQLSCDVGAISKR*LVGGQG
Trigger: GCCCTGCCCACCGACCAGCCACCTCTTGGAAATTGC...GCCAACGTCGCAGGACAGTTGTGAAAATAACATGACGCTCGTCCAAGGCCACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR CCA 90 bp GCCCTCAGGAAGTGGCCTTGGACGAGCGTCATGTTATTTTCACAACTGTCCTGCTTCACCTCTGTGTCCTaGCCTTGCTCCGTGCTCTCC +
Preference number: 4 (lower is better)
Translates to: ALRKWPWTSVMLFSQLSCFTSVS*PCSVLS
Trigger: GGAGAGCACGGAGCAAGGCCAGGACACAGAGGTGAA...GCAGGACAGTTGTGAAAATAACATGACGCTCGTCCAAGGCCACTTCCTGAGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR CCA 90 bp AAGTGGCCTTGGACGAGCGTCATGTTATTTTCACAACTGTCCTGCGACGTTGGCGGGCACGTCATGGAATaGCCCATGTCCCTCTGCTGC +
Preference number: 4 (lower is better)
Translates to: KWPWTSVMLFSQLSCDVGGHVME*PMSLCC
Trigger: GCAGCAGAGGGACATGGGCCATTCCATGACGTGCCC...GCCAACGTCGCAGGACAGTTGTGAAAATAACATGACGCTCGTCCAAGGCCACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR CCA 90 bp CGTCTCCCAAACAGTGGGTGGTCCGTTTCATCCATACTCTGCCTGGCTCAGCATAGTGTGGCTCAGGACTaGTCTGCTCTGGGTGTCAGA +
Preference number: 4 (lower is better)
Translates to: RLPNSGWSVSSILCLAQHSVAQD*SALGVR
Trigger: TCTGACACCCAGAGCAGACCAGTCCTGAGCCACACT...ATGCTGAGCCAGGCAGAGTATGGATGAAACGGACCACCCACTGTTTGGGAGACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556418.1
CDS-3UTR CCA 90 bp CTGGGAGATGAATTAAGGCGCGTCTCGGAGTCCCTGCAAAGAGGAGCCGGCGCGGGAGGACTCACACCATaGAAATGGACAGAAGCTAAA +
Preference number: 4 (lower is better)
Translates to: LGDELRRVSESLQRGAGAGGLTP*KWTEAK
Trigger: TTTAGCTTCTGTCCATTTCCATGGTGTGAGTCCTCC...CGCGCCGGCTCCTCTTTGCAGGGACTCCGAGACGCGCCTTAATTCATCTCCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556418.1
CDS-3UTR CCA 90 bp GGCTTCTCAGAGGAGGGGCTGTTGGAGAAACTGAGTCGTCTTAAAGGATGGGCATGCCTGGGCCAGGCTTaGACCAAGAGTGTCCATGTC +
Preference number: 4 (lower is better)
Translates to: GFSEEGLLEKLSRLKGWACLGQA*TKSVHV
Trigger: GACATGGACACTCTTGGTCCAAGCCTGGCCCAGGCA...TGCCCATCCTTTAAGACGACTCAGTTTCTCCAACAGCCCCTCCTCTGAGAAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556418.1
CDS-3UTR CCA 90 bp TGGTCTGCTCTGGGTGTCAGAGGAGTGAGTCTGCATAGCTGCTCACAGCTCTGGCCGTCTCCCAAACAGTaGGTGGTCCGTTTCATCCAT +
Preference number: 4 (lower is better)
Translates to: WSALGVRGVSLHSCSQLWPSPKQ*VVRFIH
Trigger: ATGGATGAAACGGACCACCCACTGTTTGGGAGACGG...CCAGAGCTGTGAGCAGCTATGCAGACTCACTCCTCTGACACCCAGAGCAGACCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556418.1
3UTR CAA 72 bp CGAGCGTCATGTTATTTTCACAACTGTCCTGCGACGTaGGCCTGGGCACGTCATGGAATGGCCCATGTCCCT +
Preference number: 4 (lower is better)
Translates to: RASCYFHNCPAT*AWARHGMAHVP
Trigger: AGGGACATGGGCCATTCCATGACGTGCCCAGGCCAACGTCGCAGGACAGTTGTGAAAATAACATGACGCTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR TCA 90 bp GGCTGTACACCTTGTAGTCCTGCACCAGGCTGCCAAAGTACGAGCCCTTGTCCTGATCTGATGCAGGCATaGGTTGATGGCTTCCTTCAG +
Preference number: 4 (lower is better)
Translates to: GCTPCSPAPGCQSTSPCPDLMQA*VDGFLQ
Trigger: CTGAAGGAAGCCATCAACTCATGCCTGCATCAGATC...AGGACAAGGGCTCGTACTTTGGCAGCCTGGTGCAGGACTACAAGGTGTACAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555589.5
CDS-3UTR TCA 90 bp TGGTCTGCTCTGGGTGTCAGAGGAGTGAGTCTGCATAGCTGCTCACAGCTCTGGGATCTGATGCAGGCATaGGTTGATGGCTTCCTTCAG +
Preference number: 4 (lower is better)
Translates to: WSALGVRGVSLHSCSQLWDLMQA*VDGFLQ
Trigger: CTGAAGGAAGCCATCAACTCATGCCTGCATCAGATC...CCAGAGCTGTGAGCAGCTATGCAGACTCACTCCTCTGACACCCAGAGCAGACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556418.1
CDS-3UTR GCA 90 bp GCCCTCAGGAAGTGGCCTTGGACGAGCGTCATGTTATTTTCACAACTGTCCTGCGTCTCTTGGGGGCTCTaGTGGCTTCCCTCTTTCTTG +
Preference number: 4 (lower is better)
Translates to: ALRKWPWTSVMLFSQLSCVSWGL*WLPSFL
Trigger: CAAGAAAGAGGGAAGCCAGCAGAGCCCCCAAGAGAC...GCAGGACAGTTGTGAAAATAACATGACGCTCGTCCAAGGCCACTTCCTGAGGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR GCA 90 bp GCGTCATGTTATTTTCACAACTGTCCTGCGACGTTGGCCTGGGCACGTCATGGAAGGCCATCGCCTGTGTaGAGAGCTCAGCGTTCTCTA +
Preference number: 4 (lower is better)
Translates to: ASCYFHNCPATLAWARHGRPSPV*RAQRSL
Trigger: TAGAGAACGCTGAGCTCTGCACACAGGCGATGGCCT...TCCATGACGTGCCCAGGCCAACGTCGCAGGACAGTTGTGAAAATAACATGACGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR GCA 90 bp TCATGTTATTTTCACAACTGTCCTGCGACGTTGGCCTGGGCACGTCATGGAATGCCAGCTCCTCCTCCGTaGTGCTGGTGGAGTAGGAGT +
Preference number: 4 (lower is better)
Translates to: SCYFHNCPATLAWARHGMPAPPP*CWWSRS
Trigger: ACTCCTACTCCACCAGCAGCACGGAGGAGGAGCTGG...CATTCCATGACGTGCCCAGGCCAACGTCGCAGGACAGTTGTGAAAATAACATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR GCA 90 bp TTGGCCATGGAGGACTCACACCATGGAAATGGACAGAAGCTAAAATCAGAGCTTCCTGCAGCATCTCCGTaGTGGAGGTCTGGCGCGCCA +
Preference number: 4 (lower is better)
Translates to: LAMEDSHHGNGQKLKSELPAASP*WRSGAP
Trigger: TGGCGCGCCAGACCTCCAGCACGGAGATGCTGCAGG...AAGCTCTGATTTTAGCTTCTGTCCATTTCCATGGTGTGAGTCCTCCATGGCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556418.1
CDS-3UTR GCA 90 bp TGTTATTTTCACAACTGTCCTGCGACGTTGGCCTGGGCACGTCATGGAATGGCCATGGTGCGAATCTCCTaGAGCATCTCCGTGCTGGAG +
Preference number: 4 (lower is better)
Translates to: CYFHNCPATLAWARHGMAMVRIS*SISVLE
Trigger: CTCCAGCACGGAGATGCTGCAGGAGATTCGCACCAT...GGCCATTCCATGACGTGCCCAGGCCAACGTCGCAGGACAGTTGTGAAAATAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR GCA 90 bp GTGCTGGAGCTGGCTCACACCCGCCAGGGAGAGCCGACTGCATACACTTCTTTCATGCTGGTGAACTTCTaGAGGATCTTCTCCATCATG +
Preference number: 4 (lower is better)
Translates to: VLELAHTRQGEPTAYTSFMLVNF*RIFSIM
Trigger: CATGATGGAGAAGATCCTGCAGAAGTTCACCAGCAT...GAAAGAAGTGTATGCAGTCGGCTCTCCCTGGCGGGTGTGAGCCAGCTCCAGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556418.1
CDS-3UTR GCA 90 bp TCATGTTATTTTCACAACTGTCCTGCGACGTTGGCCTGGGCACGTCATGGAATGCGGTGGATGGAGTCCTaGACCTCCACACTCAGCTGC +
Preference number: 4 (lower is better)
Translates to: SCYFHNCPATLAWARHGMRWMES*TSTLSC
Trigger: GCAGCTGAGTGTGGAGGTGCAGGACTCCATCCACCG...CATTCCATGACGTGCCCAGGCCAACGTCGCAGGACAGTTGTGAAAATAACATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR GCA 90 bp GCGTCATGTTATTTTCACAACTGTCCTGCGACGTTGGCCTGGGCACGTCATGGATTTTCACAACTGTCCTaGGACGTTGGCCTGGGCACG +
Preference number: 4 (lower is better)
Translates to: ASCYFHNCPATLAWARHGFSQLS*DVGLGT
Trigger: CGTGCCCAGGCCAACGTCGCAGGACAGTTGTGAAAA...TCCATGACGTGCCCAGGCCAACGTCGCAGGACAGTTGTGAAAATAACATGACGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR GCA 90 bp AGTTTCCCTTTCCGTCTAATGAAGAACATGCCGTCTCGGTGTCTCAGGGCTATTAGCAGCTGTGGCCGGTaGTCCTTCCTAGGCCAGTCC +
Preference number: 4 (lower is better)
Translates to: SFPFRLMKNMPSRCLRAISSCGR*SFLGQS
Trigger: GGACTGGCCTAGGAAGGAGCACCGGCCACAGCTGCT...AATAGCCCTGAGACACCGAGACGGCATGTTCTTCATTAGACGGAAAGGGAAACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR GCA 90 bp TTGGCCATGGAGGACTCACACCATGGAAATGGACAGAAGCTAAAATCAGAGCTTTGCGAGTCCGGCACCTaGGCCTTTCCCGTCTCTGCC +
Preference number: 4 (lower is better)
Translates to: LAMEDSHHGNGQKLKSELCESGT*AFPVSA
Trigger: GGCAGAGACGGGAAAGGCGCAGGTGCCGGACTCGCA...AAGCTCTGATTTTAGCTTCTGTCCATTTCCATGGTGTGAGTCCTCCATGGCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556418.1
CDS-3UTR CCA 90 bp TTGGCCATGGAGGACTCACACCATGGAAATGGACAGAAGCTAAAATCAGAGCTTTTGGCCCTCTCTGGGTaGACCCGGCGTGGGTGTCTC +
Preference number: 4 (lower is better)
Translates to: LAMEDSHHGNGQKLKSELLALSG*TRRGCL
Trigger: GAGACACCCACGCCGGGTCCACCCAGAGAGGGCCAA...AAGCTCTGATTTTAGCTTCTGTCCATTTCCATGGTGTGAGTCCTCCATGGCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556418.1
CDS-3UTR CCA 90 bp AAGTGGCCTTGGACGAGCGTCATGTTATTTTCACAACTGTCCTGCGACGTTGGCGGGACTCATGGGGAATaGCCTGAGGAGCTACGTGTG +
Preference number: 4 (lower is better)
Translates to: KWPWTSVMLFSQLSCDVGGTHGE*PEELRV
Trigger: CACACGTAGCTCCTCAGGCCATTCCCCATGAGTCCC...GCCAACGTCGCAGGACAGTTGTGAAAATAACATGACGCTCGTCCAAGGCCACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR CCA 90 bp TGTTATTTTCACAACTGTCCTGCGACGTTGGCCTGGGCACGTCATGGAATGGCCAATCTGCCACAGCTCTaGGGCGTGTCCTGTAGGGAA +
Preference number: 4 (lower is better)
Translates to: CYFHNCPATLAWARHGMANLPQL*GVSCRE
Trigger: TTCCCTACAGGACACGCCCCAGAGCTGTGGCAGATT...GGCCATTCCATGACGTGCCCAGGCCAACGTCGCAGGACAGTTGTGAAAATAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR CCA 90 bp GTCTCATTCCTCCTGCACCCTTCCTGCTTGCCCAGGGAGAACACCAATGCCTGCAGTCGTCTTAAAGGATaGGCAGTGACAGCCAGTGAA +
Preference number: 4 (lower is better)
Translates to: VSFLLHPSCLPRENTNACSRLKG*AVTASE
Trigger: TTCACTGGCTGTCACTGCCCATCCTTTAAGACGACT...GCAGGCATTGGTGTTCTCCCTGGGCAAGCAGGAAGGGTGCAGGAGGAATGAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556418.1
CDS-3UTR CCA 90 bp TGGTCTGCTCTGGGTGTCAGAGGAGTGAGTCTGCATAGCTGCTCACAGCTCTGGCTCCCAAACAGTGGGTaGTCCGTTTCATCCATACTC +
Preference number: 4 (lower is better)
Translates to: WSALGVRGVSLHSCSQLWLPNSG*SVSSIL
Trigger: GAGTATGGATGAAACGGACCACCCACTGTTTGGGAG...CCAGAGCTGTGAGCAGCTATGCAGACTCACTCCTCTGACACCCAGAGCAGACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556418.1
3UTR CAA 72 bp TGCGCCAGCTCCACCACCTTCTTGTACAGCTTGCGGTaGTTGGAGAGGAAAGCGTGGAACATGCTGCTGAAA +
Preference number: 4 (lower is better)
Translates to: CASSTTFLYSLR*LERKAWNMLLK
Trigger: TTTCAGCAGCATGTTCCACGCTTTCCTCTCCAACAACCGCAAGCTGTACAAGAAGGTGGTGGAGCTGGCGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555589.5
3UTR CAA 72 bp ATCATGTACTCCACATTGAGAAGCATCTCCGTGAGGTaGCTGCGGGCCAGCACATACATGAGCACAGGCAGG +
Preference number: 4 (lower is better)
Translates to: IMYSTLRSISVR*LRASTYMSTGR
Trigger: CCTGCCTGTGCTCATGTATGTGCTGGCCCGCAGCAACCTCACGGAGATGCTTCTCAATGTGGAGTACATGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555589.5
CDS-3UTR TCA 90 bp AGACAAGAGGAAGTGGATCACACTAGGTCATCTCTGGGGAAAATGAGAAGCCGGCATCTCTGGGGAAAATaGGAAGCCGGTGAGGCCAGC +
Preference number: 4 (lower is better)
Translates to: RQEEVDHTRSSLGKMRSRHLWGK*EAGEAS
Trigger: GCTGGCCTCACCGGCTTCTCATTTTCCCCAGAGATG...CCGGCTTCTCATTTTCCCCAGAGATGACCTAGTGTGATCCACTTCCTCTTGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000557762.1
CDS-3UTR GCA 90 bp CCTGAGCCTCAGTTTCCCTTTCCGTCTAATGAAGAACATGCCGTCTCGGTGTCTGCAGCGAACCATCCTTaGTGTGGATCTGATGCAGGC +
Preference number: 4 (lower is better)
Translates to: PEPQFPFPSNEEHAVSVSAANHP*CGSDAG
Trigger: GCCTGCATCAGATCCACAGCAAGGATGGTTCGCTGC...AGACACCGAGACGGCATGTTCTTCATTAGACGGAAAGGGAAACTGAGGCTCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR GCA 90 bp AGACAAGAGGAAGTGGATCACACTAGGTCATCTCTGGGGAAAATGAGAAGCCGGTCTCCGGCTTCACCCTaGCATCTTGGGTGTGGCAGA +
Preference number: 4 (lower is better)
Translates to: RQEEVDHTRSSLGKMRSRSPASP*HLGCGR
Trigger: TCTGCCACACCCAAGATGGCAGGGTGAAGCCGGAGA...CCGGCTTCTCATTTTCCCCAGAGATGACCTAGTGTGATCCACTTCCTCTTGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557762.1
CDS-3UTR CCA 90 bp CCTGAGCCTCAGTTTCCCTTTCCGTCTAATGAAGAACATGCCGTCTCGGTGTCTGGCAGTTTTTCGGGTTaGCTGGCAGACAAAGCCGCA +
Preference number: 4 (lower is better)
Translates to: PEPQFPFPSNEEHAVSVSGSFSG*LADKAA
Trigger: TGCGGCTTTGTCTGCCAGCCAACCCGAAAAACTGCC...AGACACCGAGACGGCATGTTCTTCATTAGACGGAAAGGGAAACTGAGGCTCAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR CCA 90 bp GGCTGTACACCTTGTAGTCCTGCACCAGGCTGCCAAAGTACGAGCCCTTGTCCTTTGGAGAGGAAAGCGTaGAACATGCTGCTGAAACTG +
Preference number: 4 (lower is better)
Translates to: GCTPCSPAPGCQSTSPCPLERKA*NMLLKL
Trigger: CAGTTTCAGCAGCATGTTCCACGCTTTCCTCTCCAA...AGGACAAGGGCTCGTACTTTGGCAGCCTGGTGCAGGACTACAAGGTGTACAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555589.5
CDS-3UTR CCA 90 bp TCATGTTATTTTCACAACTGTCCTGCGACGTTGGCCTGGGCACGTCATGGAATGACTGTCCTGCGACGTTaGCCTGGGCACGTCATGGAA +
Preference number: 4 (lower is better)
Translates to: SCYFHNCPATLAWARHGMTVLRR*PGHVME
Trigger: TTCCATGACGTGCCCAGGCCAACGTCGCAGGACAGT...CATTCCATGACGTGCCCAGGCCAACGTCGCAGGACAGTTGTGAAAATAACATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR CCA 90 bp AGTTTCCCTTTCCGTCTAATGAAGAACATGCCGTCTCGGTGTCTCAGGGCTATTTGCAAAGACCGAGGATaGGGTGGGTGTGGGGGACTC +
Preference number: 4 (lower is better)
Translates to: SFPFRLMKNMPSRCLRAICKDRG*GGCGGL
Trigger: GAGTCCCCCACACCCACCCCATCCTCGGTCTTTGCA...AATAGCCCTGAGACACCGAGACGGCATGTTCTTCATTAGACGGAAAGGGAAACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR CCA 90 bp TTGGCCATGGAGGACTCACACCATGGAAATGGACAGAAGCTAAAATCAGAGCTTTGGGGGCCCTTCCTCTaGTGTGGGGAGTCTCACTGC +
Preference number: 4 (lower is better)
Translates to: LAMEDSHHGNGQKLKSELWGPFL*CGESHC
Trigger: GCAGTGAGACTCCCCACACCAGAGGAAGGGCCCCCA...AAGCTCTGATTTTAGCTTCTGTCCATTTCCATGGTGTGAGTCCTCCATGGCCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000556418.1
CDS-3UTR TCA 90 bp GGCTTCTCAGAGGAGGGGCTGTTGGAGAAACTGAGTCGTCTTAAAGGATGGGCAGGGGCGGGACTGGTTTaGATACTGAGTCTGTATAGA +
Preference number: 4 (lower is better)
Translates to: GFSEEGLLEKLSRLKGWAGAGLV*ILSLYR
Trigger: TCTATACAGACTCAGTATTCAAACCAGTCCCGCCCC...TGCCCATCCTTTAAGACGACTCAGTTTCTCCAACAGCCCCTCCTCTGAGAAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556418.1
CDS-3UTR CCA 90 bp GATGGCTTCCTTCAGGGGCTTCAGGACACATTTGTACAAGGCAGACTCTACAATAACCCAGACCCAGGTTaGCGATGGTCTCAAGGTCCG +
Preference number: 4 (lower is better)
Translates to: DGFLQGLQDTFVQGRLYNNPDPG*RWSQGP
Trigger: CGGACCTTGAGACCATCGCCAACCTGGGTCTGGGTT...ATTGTAGAGTCTGCCTTGTACAAATGTGTCCTGAAGCCCCTGAAGGAAGCCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555589.5
CDS-3UTR CCA 90 bp AGTTTCCCTTTCCGTCTAATGAAGAACATGCCGTCTCGGTGTCTCAGGGCTATTAACTCTGGAGAGCTCTaGGAATGGGCAGTGGCCTGG +
Preference number: 4 (lower is better)
Translates to: SFPFRLMKNMPSRCLRAINSGEL*EWAVAW
Trigger: CCAGGCCACTGCCCATTCCCAGAGCTCTCCAGAGTT...AATAGCCCTGAGACACCGAGACGGCATGTTCTTCATTAGACGGAAAGGGAAACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR TCA 90 bp GGGAAACTAAGCTCGGGCCCTTCTTTGCAAAGACCGAGGATGGGGTGGGTGTGGAGAACGCAATCAATCTaGAGATGTCCTCAAACACAA +
Preference number: 4 (lower is better)
Translates to: GKLSSGPSLQRPRMGWVWRTQSI*RCPQTQ
Trigger: TTGTGTTTGAGGACATCTTCAGATTGATTGCGTTCT...CCACACCCACCCCATCCTCGGTCTTTGCAAAGAAGGGCCCGAGCTTAGTTTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR CCA 90 bp AGACAAGAGGAAGTGGATCACACTAGGTCATCTCTGGGGAAAATGAGAAGCCGGCTGCCATCTTGGGTGTaGCAGATACTTGCAAGTGGG +
Preference number: 4 (lower is better)
Translates to: RQEEVDHTRSSLGKMRSRLPSWV*QILASG
Trigger: CCCACTTGCAAGTATCTGCCACACCCAAGATGGCAG...CCGGCTTCTCATTTTCCCCAGAGATGACCTAGTGTGATCCACTTCCTCTTGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557762.1
CDS-3UTR CCA 90 bp TTGGCCATGGAGGACTCACACCATGGAAATGGACAGAAGCTAAAATCAGAGCTTGAAGTACGGGATGCCTaGGCCAGGCTTGGACCAAGA +
Preference number: 4 (lower is better)
Translates to: LAMEDSHHGNGQKLKSELEVRDA*ARLGPR
Trigger: TCTTGGTCCAAGCCTGGCCCAGGCATCCCGTACTTC...AAGCTCTGATTTTAGCTTCTGTCCATTTCCATGGTGTGAGTCCTCCATGGCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556418.1
CDS-3UTR GCA 90 bp GCGTCATGTTATTTTCACAACTGTCCTGCGACGTTGGCCTGGGCACGTCATGGAATGCTGGTGAACTTCTaGAGGATCTTCTCCATCATG +
Preference number: 4 (lower is better)
Translates to: ASCYFHNCPATLAWARHGMLVNF*RIFSIM
Trigger: CATGATGGAGAAGATCCTGCAGAAGTTCACCAGCAT...TCCATGACGTGCCCAGGCCAACGTCGCAGGACAGTTGTGAAAATAACATGACGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR CCA 90 bp GATGGCTTCCTTCAGGGGCTTCAGGACACATTTGTACAAGGCAGACTCTACAATGCCAGGATCACTAACTaGTTCTCCTTGAGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: DGFLQGLQDTFVQGRLYNARITN*FSLSCC
Trigger: GCAGCAGCTCAAGGAGAACCAGTTAGTGATCCTGGC...ATTGTAGAGTCTGCCTTGTACAAATGTGTCCTGAAGCCCCTGAAGGAAGCCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555589.5
CDS-3UTR CCA 90 bp AGACAAGAGGAAGTGGATCACACTAGGTCATCTCTGGGGAAAATGAGAAGCCGGTTCACCCTGCCATCTTaGGTGTGGCAGATACTTGCA +
Preference number: 4 (lower is better)
Translates to: RQEEVDHTRSSLGKMRSRFTLPS*VWQILA
Trigger: TGCAAGTATCTGCCACACCCAAGATGGCAGGGTGAA...CCGGCTTCTCATTTTCCCCAGAGATGACCTAGTGTGATCCACTTCCTCTTGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557762.1
CDS-3UTR TCA 90 bp TTGGCCATGGAGGACTCACACCATGGAAATGGACAGAAGCTAAAATCAGAGCTTCTAACTGGTTCTCCTTaGGCTGCTGCAGCGAACCAT +
Preference number: 4 (lower is better)
Translates to: LAMEDSHHGNGQKLKSELLTGSP*AAAANH
Trigger: ATGGTTCGCTGCAGCAGCTCAAGGAGAACCAGTTAG...AAGCTCTGATTTTAGCTTCTGTCCATTTCCATGGTGTGAGTCCTCCATGGCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556418.1
CDS-3UTR TCA 90 bp TTGGCCATGGAGGACTCACACCATGGAAATGGACAGAAGCTAAAATCAGAGCTTGACAGTTCTGGGAGATaGATTAAGGCGCGTCTCGGA +
Preference number: 4 (lower is better)
Translates to: LAMEDSHHGNGQKLKSELDSSGR*IKARLG
Trigger: TCCGAGACGCGCCTTAATTCATCTCCCAGAACTGTC...AAGCTCTGATTTTAGCTTCTGTCCATTTCCATGGTGTGAGTCCTCCATGGCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556418.1
CDS-3UTR CCA 90 bp TTGGCCATGGAGGACTCACACCATGGAAATGGACAGAAGCTAAAATCAGAGCTTGCCAGGATCACTAACTaGTTCTCCTTGAGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: LAMEDSHHGNGQKLKSELARITN*FSLSCC
Trigger: GCAGCAGCTCAAGGAGAACCAGTTAGTGATCCTGGC...AAGCTCTGATTTTAGCTTCTGTCCATTTCCATGGTGTGAGTCCTCCATGGCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556418.1
CDS-3UTR CCA 90 bp AGACAAGAGGAAGTGGATCACACTAGGTCATCTCTGGGGAAAATGAGAAGCCGGGTTCTTCCCACCGGATaGTATTTGTCTTTGCAGAGG +
Preference number: 4 (lower is better)
Translates to: RQEEVDHTRSSLGKMRSRVLPTG*YLSLQR
Trigger: CCTCTGCAAAGACAAATACCATCCGGTGGGAAGAAC...CCGGCTTCTCATTTTCCCCAGAGATGACCTAGTGTGATCCACTTCCTCTTGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557762.1
3UTR CAA 72 bp CTTTCCAACTCCACATTCAGTGATGCCAAGTTGAAGTaGGCCATGGAGGACTCACACCATGGAAATGGACAG +
Preference number: 4 (lower is better)
Translates to: LSNSTFSDAKLK*AMEDSHHGNGQ
Trigger: CTGTCCATTTCCATGGTGTGAGTCCTCCATGGCCAACTTCAACTTGGCATCACTGAATGTGGAGTTGGAAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556418.1
CDS-3UTR TCA 90 bp TCATGTTATTTTCACAACTGTCCTGCGACGTTGGCCTGGGCACGTCATGGAATGGCAGTAAGTCTCTACTaGCACAGTAGAACGCAATCA +
Preference number: 4 (lower is better)
Translates to: SCYFHNCPATLAWARHGMAVSLY*HSRTQS
Trigger: TGATTGCGTTCTACTGTGTCAGTAGAGACTTACTGC...CATTCCATGACGTGCCCAGGCCAACGTCGCAGGACAGTTGTGAAAATAACATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR GCA 90 bp AGACAAGAGGAAGTGGATCACACTAGGTCATCTCTGGGGAAAATGAGAAGCCGGGATGGTATTTGTCTTTaGAGAGGTCGCTTTCGAGAG +
Preference number: 4 (lower is better)
Translates to: RQEEVDHTRSSLGKMRSRDGICL*RGRFRE
Trigger: CTCTCGAAAGCGACCTCTGCAAAGACAAATACCATC...CCGGCTTCTCATTTTCCCCAGAGATGACCTAGTGTGATCCACTTCCTCTTGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557762.1
CDS-3UTR CCA 90 bp AGACAAGAGGAAGTGGATCACACTAGGTCATCTCTGGGGAAAATGAGAAGCCGGAAAGACAAGAGGAAGTaGATCACACTAGGTCATCTC +
Preference number: 4 (lower is better)
Translates to: RQEEVDHTRSSLGKMRSRKDKRK*ITLGHL
Trigger: GAGATGACCTAGTGTGATCCACTTCCTCTTGTCTTT...CCGGCTTCTCATTTTCCCCAGAGATGACCTAGTGTGATCCACTTCCTCTTGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557762.1
3UTR CAA 72 bp ACACTTCTTTCCAACTCCACATTCAGTGATGCCAAGTaGAAGTTGGCCATGGAGGACTCACACCATGGAAAT +
Preference number: 4 (lower is better)
Translates to: TLLSNSTFSDAK*KLAMEDSHHGN
Trigger: ATTTCCATGGTGTGAGTCCTCCATGGCCAACTTCAACTTGGCATCACTGAATGTGGAGTTGGAAAGAAGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556418.1
CDS-3UTR TCA 90 bp AGTTTCCCTTTCCGTCTAATGAAGAACATGCCGTCTCGGTGTCTCAGGGCTATTAGAACGCAATCAATCTaGAGATGTCCTCAAACACAA +
Preference number: 4 (lower is better)
Translates to: SFPFRLMKNMPSRCLRAIRTQSI*RCPQTQ
Trigger: TTGTGTTTGAGGACATCTTCAGATTGATTGCGTTCT...AATAGCCCTGAGACACCGAGACGGCATGTTCTTCATTAGACGGAAAGGGAAACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR GCA 90 bp TTGGCCATGGAGGACTCACACCATGGAAATGGACAGAAGCTAAAATCAGAGCTTTCTGCTTATTATAGATaGACCATCTTGAAAGCCAGG +
Preference number: 4 (lower is better)
Translates to: LAMEDSHHGNGQKLKSELSAYYR*TILKAR
Trigger: CCTGGCTTTCAAGATGGTGCATCTATAATAAGCAGA...AAGCTCTGATTTTAGCTTCTGTCCATTTCCATGGTGTGAGTCCTCCATGGCCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556418.1
CDS GCA 90 bp AGCCGGTGCGCCTGCGGCCGCTCCACCGCGAACTTCTCCGCGCACTaGGCGCACAGCGCCTGGGCCTGGGTGTCCGCCCGCGACGCCAGC +
Preference number: 5 (lower is better)
Translates to: SRCACGRSTANFSAH*AHSAWAWVSARDAS
Trigger: GCTGGCGTCGCGGGCGGACACCCAGGCCCAGGCGCTGTGCGCGCAGTGCGCGGAGAAGTTCGCGGTGGAGCGGCCGCAGGCGCACCGGCT
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000216487.12
ENST00000418924.6
ENST00000620541.4
CDS-3UTR CAA 90 bp CGAGGCGACGCCTGCGGGCTGGGGCTGGGCACTCGCAGCACGAGCAGGGCGCCCCGGGAGGCCCGGGCCTaGTTGAGAGTACGCCGGCGC +
Preference number: 5 (lower is better)
Translates to: RGDACGLGLGTRSTSRAPREARA*LRVRRR
Trigger: GCGCCGGCGTACTCTCAACAAGGCCCGGGCCTCCCG...GGGCGCCCTGCTCGTGCTGCGAGTGCCCAGCCCCAGCCCGCAGGCGTCGCCTCG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556418.1
CDS-3UTR CAA 90 bp GCGAGGCGACGCCTGCGGGCTGGGGCTGGGCACTCGCAGCACGAGCAGGGCGCCGAGGCCCGGGCCTTGTaGAGAGTACGCCGGCGCTCC +
Preference number: 5 (lower is better)
Translates to: ARRRLRAGAGHSQHEQGAEARAL*RVRRRS
Trigger: GGAGCGCCGGCGTACTCTCAACAAGGCCCGGGCCTC...GGCGCCCTGCTCGTGCTGCGAGTGCCCAGCCCCAGCCCGCAGGCGTCGCCTCGC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556418.1
CDS-3UTR CAA 90 bp CCCTCTGCTGCGTGGACGTCGCGGTCGGGAGTGCGCAGCCAGAGGCGGGGCCAGGAGGGCGCCGGTTTGTaGGCTGCAGCGGCCTGGAGC +
Preference number: 5 (lower is better)
Translates to: PSAAWTSRSGVRSQRRGQEGAGL*AAAAWS
Trigger: GCTCCAGGCCGCTGCAGCCAACAAACCGGCGCCCTC...CTGGCCCCGCCTCTGGCTGCGCACTCCCGACCGCGACGTCCACGCAGCAGAGGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS GCA 90 bp TCCGCCAGCTGGAAGCAGCGCCCGTCCACCAGCACGAACAGCCGGTaGGCCTGCGGCCGCTCCACCGCGAACTTCTCCGCGCACTGCGCG +
Preference number: 5 (lower is better)
Translates to: SASWKQRPSTSTNSR*ACGRSTANFSAHCA
Trigger: CGCGCAGTGCGCGGAGAAGTTCGCGGTGGAGCGGCCGCAGGCGCACCGGCTGTTCGTGCTGGTGGACGGGCGCTGCTTCCAGCTGGCGGA
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000216487.12
ENST00000418924.6
ENST00000620541.4
CDS-3UTR CAA 90 bp CCCTCTGCTGCGTGGACGTCGCGGTCGGGAGTGCGCAGCCAGAGGCGGGGCCAGGGGCCTCACAGGAAGTaGGGCTCCCGCACCACCAGG +
Preference number: 5 (lower is better)
Translates to: PSAAWTSRSGVRSQRRGQGPHRK*GSRTTR
Trigger: CCTGGTGGTGCGGGAGCCCAACTTCCTGTGAGGCCC...CTGGCCCCGCCTCTGGCTGCGCACTCCCGACCGCGACGTCCACGCAGCAGAGGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR CAA 90 bp CCCTCTGCTGCGTGGACGTCGCGGTCGGGAGTGCGCAGCCAGAGGCGGGGCCAGGAAGAGGGCGCCGGTTaGTTGGCTGCAGCGGCCTGG +
Preference number: 5 (lower is better)
Translates to: PSAAWTSRSGVRSQRRGQEEGAG*LAAAAW
Trigger: CCAGGCCGCTGCAGCCAACAAACCGGCGCCCTCTTC...CTGGCCCCGCCTCTGGCTGCGCACTCCCGACCGCGACGTCCACGCAGCAGAGGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS GCA 90 bp AGCTGGAAGCAGCGCCCGTCCACCAGCACGAACAGCCGGTGCGCCTaGGGCCGCTCCACCGCGAACTTCTCCGCGCACTGCGCGCACAGC +
Preference number: 5 (lower is better)
Translates to: SWKQRPSTSTNSRCA*GRSTANFSAHCAHS
Trigger: GCTGTGCGCGCAGTGCGCGGAGAAGTTCGCGGTGGAGCGGCCGCAGGCGCACCGGCTGTTCGTGCTGGTGGACGGGCGCTGCTTCCAGCT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000216487.12
ENST00000418924.6
ENST00000620541.4
CDS-3UTR CAA 90 bp CGAGGCGACGCCTGCGGGCTGGGGCTGGGCACTCGCAGCACGAGCAGGGCGCCCAGCATCTCCGTGAGGTaGCTGCGGGCCAGCACATAC +
Preference number: 5 (lower is better)
Translates to: RGDACGLGLGTRSTSRAPSISVR*LRASTY
Trigger: GTATGTGCTGGCCCGCAGCAACCTCACGGAGATGCT...GGGCGCCCTGCTCGTGCTGCGAGTGCCCAGCCCCAGCCCGCAGGCGTCGCCTCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556418.1
CDS-3UTR CAA 90 bp CCCTCTGCTGCGTGGACGTCGCGGTCGGGAGTGCGCAGCCAGAGGCGGGGCCAGAGCATCTCCGTGAGGTaGCTGCGGGCCAGCACATAC +
Preference number: 5 (lower is better)
Translates to: PSAAWTSRSGVRSQRRGQSISVR*LRASTY
Trigger: GTATGTGCTGGCCCGCAGCAACCTCACGGAGATGCT...CTGGCCCCGCCTCTGGCTGCGCACTCCCGACCGCGACGTCCACGCAGCAGAGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR CAA 90 bp TGGCACGGGGAGCAGCTGTGGCCGGTGCTCCTTCCTAGGCCAGTCCTGGGGAAAGAGGCGGGGCTGGGCTaGTCCATGGGTCCGCGGAGC +
Preference number: 5 (lower is better)
Translates to: WHGEQLWPVLLPRPVLGKEAGLG*SMGPRS
Trigger: GCTCCGCGGACCCATGGACAAGCCCAGCCCCGCCTC...TTTCCCCAGGACTGGCCTAGGAAGGAGCACCGGCCACAGCTGCTCCCCGTGCCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS TCA 90 bp CGTCTCGGAGTCCCTGTACGGAGGAGCGGGAGGCCCGGGCCTTGTTaGGAGTACGCCGGCGCTCCCAGCGGTGGATGGAGTCCTGCACCT +
Preference number: 5 (lower is better)
Translates to: RLGVPVRRSGRPGPC*EYAGAPSGGWSPAP
Trigger: AGGTGCAGGACTCCATCCACCGCTGGGAGCGCCGGCGTACTCTCAACAAGGCCCGGGCCTCCCGCTCCTCCGTACAGGGACTCCGAGACG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553959.1
CDS-3UTR CAA 90 bp AGCTGCTTCTTGCCGGGCACAGAGCTGCGGGGTCTGGGGGCACCGGGAGCTAAGGGGCGGGACTGGGGGTaGTTTGGCTGTCCTGGGCAG +
Preference number: 5 (lower is better)
Translates to: SCFLPGTELRGLGAPGAKGRDWG*FGCPGQ
Trigger: CTGCCCAGGACAGCCAAACAACCCCCAGTCCCGCCC...CTTAGCTCCCGGTGCCCCCAGACCCCGCAGCTCTGTGCCCGGCAAGAAGCAGCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR CAA 90 bp CCGGGCACAGAGCTGCGGGGTCTGGGGGCACCGGGAGCTAAGAGCAGGCTCTGGCCAAAGTACGAGCCCTaGTCCTGCGCCAGCTCCACC +
Preference number: 5 (lower is better)
Translates to: PGTELRGLGAPGAKSRLWPKYEP*SCASST
Trigger: GGTGGAGCTGGCGCAGGACAAGGGCTCGTACTTTGG...CCAGAGCCTGCTCTTAGCTCCCGGTGCCCCCAGACCCCGCAGCTCTGTGCCCGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR CAA 90 bp AGTGGCACGGGGAGCAGCTGTGGCCGGTGCTCCTTCCTAGGCCAGTCCTGGGGAGGGTCCACCAGGGCCTaGAGCTCGGTGCTCTGCAGC +
Preference number: 5 (lower is better)
Translates to: SGTGSSCGRCSFLGQSWGGSTRA*SSVLCS
Trigger: GCTGCAGAGCACCGAGCTCAAGGCCCTGGTGGACCC...TCCCCAGGACTGGCCTAGGAAGGAGCACCGGCCACAGCTGCTCCCCGTGCCACT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR CAA 90 bp CCCGGGCATCCCATAGTGCGGGCGGGCAACACAGTCCAGCCCCTTAGGGCTGCAGGGTCCACCAGGGCCTaGAGCTCGGTGCTCTGCAGC +
Preference number: 5 (lower is better)
Translates to: PGHPIVRAGNTVQPLRAAGSTRA*SSVLCS
Trigger: GCTGCAGAGCACCGAGCTCAAGGCCCTGGTGGACCC...TGCAGCCCTAAGGGGCTGGACTGTGTTGCCCGCCCGCACTATGGGATGCCCGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556418.1
CDS-3UTR CAA 90 bp TGGCACGGGGAGCAGCTGTGGCCGGTGCTCCTTCCTAGGCCAGTCCTGGGGAAAGAGGCCCGGGCCTTGTaGAGAGTACGCCGGCGCTCC +
Preference number: 5 (lower is better)
Translates to: WHGEQLWPVLLPRPVLGKEARAL*RVRRRS
Trigger: GGAGCGCCGGCGTACTCTCAACAAGGCCCGGGCCTC...TTTCCCCAGGACTGGCCTAGGAAGGAGCACCGGCCACAGCTGCTCCCCGTGCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR CAA 90 bp GGTCCGCGGAGCTGGCCGTGCTTGGCGCCCTGGCGTGTGTCTAGCTGCTTCTTGGGGCCTCACAGGAAGTaGGGCTCCCGCACCACCAGG +
Preference number: 5 (lower is better)
Translates to: GPRSWPCLAPWRVSSCFLGPHRK*GSRTTR
Trigger: CCTGGTGGTGCGGGAGCCCAACTTCCTGTGAGGCCC...CAAGAAGCAGCTAGACACACGCCAGGGCGCCAAGCACGGCCAGCTCCGCGGACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR CAA 90 bp TGGCACGGGGAGCAGCTGTGGCCGGTGCTCCTTCCTAGGCCAGTCCTGGGGAAAGAGGGCGCCGGTTTGTaGGCTGCAGCGGCCTGGAGC +
Preference number: 5 (lower is better)
Translates to: WHGEQLWPVLLPRPVLGKEGAGL*AAAAWS
Trigger: GCTCCAGGCCGCTGCAGCCAACAAACCGGCGCCCTC...TTTCCCCAGGACTGGCCTAGGAAGGAGCACCGGCCACAGCTGCTCCCCGTGCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR CAA 90 bp AATGGCCCATGTCCCTCTGCTGCGTGGACGTCGCGGTCGGGAGTGCGCAGCCAGGAAGAGGGCGCCGGTTaGTTGGCTGCAGCGGCCTGG +
Preference number: 5 (lower is better)
Translates to: NGPCPSAAWTSRSGVRSQEEGAG*LAAAAW
Trigger: CCAGGCCGCTGCAGCCAACAAACCGGCGCCCTCTTC...CTGGCTGCGCACTCCCGACCGCGACGTCCACGCAGCAGAGGGACATGGGCCATT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS TCA 90 bp CAAAGTGGAAGTCGCGCTTGGGCTCGCTGCGCAGCAGGTAGCCCTTaGTGCAGTGCGGCAGCGCGTCGTCCGCCAGCTGGAAGCAGCGCC +
Preference number: 5 (lower is better)
Translates to: QSGSRAWARCAAGSP*CSAAARRPPAGSSA
Trigger: GGCGCTGCTTCCAGCTGGCGGACGACGCGCTGCCGCACTGCATCAAGGGCTACCTGCTGCGCAGCGAGCCCAAGCGCGACTTCCACTTTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000216487.12
ENST00000418924.6
ENST00000620541.4
CDS TCA 90 bp TCTCAGGCCTCACCTGTACGGAGGAGCGGGAGGCCCGGGCCTTGTTaGGAGTACGCCGGCGCTCCCAGCGGTGGATGGAGTCCTGCACCT +
Preference number: 5 (lower is better)
Translates to: SQASPVRRSGRPGPC*EYAGAPSGGWSPAP
Trigger: AGGTGCAGGACTCCATCCACCGCTGGGAGCGCCGGCGTACTCTCAACAAGGCCCGGGCCTCCCGCTCCTCCGTACAGGTGAGGCCTGAGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556418.1
CDS-3UTR CAA 90 bp CAGGGCCCCGTAGGTGGTGGTCAGATAGTAGGAACCCTCCCCCAGCTGCAGGGCCTCTGTGTCCTGGCCTaGCTCCGTGCTCTCCCGGGG +
Preference number: 5 (lower is better)
Translates to: QGPVGGGQIVGTLPQLQGLCVLA*LRALPG
Trigger: CCCCGGGAGAGCACGGAGCAAGGCCAGGACACAGAG...GCCCTGCAGCTGGGGGAGGGTTCCTACTATCTGACCACCACCTACGGGGCCCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000555589.5
CDS-3UTR CAA 90 bp CGACACCCTGAGGTGCTCCTGAGATGCTGGGTCCACCCTGAGTGGCACGGGGAGAGCCGGTGCCGAGCCTaGCCCAGGATCATGGAGGGC +
Preference number: 5 (lower is better)
Translates to: RHPEVLLRCWVHPEWHGESRCRA*PRIMEG
Trigger: GCCCTCCATGATCCTGGGCAAGGCTCGGCACCGGCT...CTCCCCGTGCCACTCAGGGTGGACCCAGCATCTCAGGAGCACCTCAGGGTGTCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR CAA 90 bp CCGGACTTTGGTCTTCTAAGGACACCCTCTCGGAAACGCGGCGTCTGGGAGGGGCGGGAGGCCCGGGCCTaGTTGAGAGTACGCCGGCGC +
Preference number: 5 (lower is better)
Translates to: PDFGLLRTPSRKRGVWEGREARA*LRVRRR
Trigger: GCGCCGGCGTACTCTCAACAAGGCCCGGGCCTCCCG...CCCCTCCCAGACGCCGCGTTTCCGAGAGGGTGTCCTTAGAAGACCAAAGTCCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555589.5
CDS-3UTR CAA 90 bp TGGGTCCGCGGAGCTGGCCGTGCTTGGCGCCCTGGCGTGTGTCTAGCTGCTTCTAAGTGGAAGTCGCGCTaGGGCTCGCTGCGCAGCAGG +
Preference number: 5 (lower is better)
Translates to: WVRGAGRAWRPGVCLAASKWKSR*GSLRSR
Trigger: CCTGCTGCGCAGCGAGCCCAAGCGCGACTTCCACTT...AGAAGCAGCTAGACACACGCCAGGGCGCCAAGCACGGCCAGCTCCGCGGACCCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR CAA 90 bp AATGGCCCATGTCCCTCTGCTGCGTGGACGTCGCGGTCGGGAGTGCGCAGCCAGAAGTGGAAGTCGCGCTaGGGCTCGCTGCGCAGCAGG +
Preference number: 5 (lower is better)
Translates to: NGPCPSAAWTSRSGVRSQKWKSR*GSLRSR
Trigger: CCTGCTGCGCAGCGAGCCCAAGCGCGACTTCCACTT...CTGGCTGCGCACTCCCGACCGCGACGTCCACGCAGCAGAGGGACATGGGCCATT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR CAA 90 bp CCAGCCCCACACCTGCCGGGCTTTGCCTTTGCTCCCACTGCCTGTGTGGCCTTGCCCCTTGTGGCCGGATaGGGAACAGCAGGCCTGCGC +
Preference number: 5 (lower is better)
Translates to: PAPHLPGFAFAPTACVALPLVAG*GTAGLR
Trigger: GCGCAGGCCTGCTGTTCCCAATCCGGCCACAAGGGG...CAAGGCCACACAGGCAGTGGGAGCAAAGGCAAAGCCCGGCAGGTGTGGGGCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556418.1
CDS-3UTR CAA 90 bp AGTGGCACGGGGAGCAGCTGTGGCCGGTGCTCCTTCCTAGGCCAGTCCTGGGGAGGGACTGGGGGTTGTTaGGCTGTCCTGGGCAGCTCT +
Preference number: 5 (lower is better)
Translates to: SGTGSSCGRCSFLGQSWGGTGGC*AVLGSS
Trigger: AGAGCTGCCCAGGACAGCCAAACAACCCCCAGTCCC...TCCCCAGGACTGGCCTAGGAAGGAGCACCGGCCACAGCTGCTCCCCGTGCCACT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR CAA 90 bp AGTGGCACGGGGAGCAGCTGTGGCCGGTGCTCCTTCCTAGGCCAGTCCTGGGGACTGAGAAGCAGGGCTTaGGCCCTCTCTGGGTGGACC +
Preference number: 5 (lower is better)
Translates to: SGTGSSCGRCSFLGQSWGLRSRA*ALSGWT
Trigger: GGTCCACCCAGAGAGGGCCAAAGCCCTGCTTCTCAG...TCCCCAGGACTGGCCTAGGAAGGAGCACCGGCCACAGCTGCTCCCCGTGCCACT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR CAA 90 bp GGGCCCTTCCTCTGGTGTGGGGAGTCTCACTGCTCCCCTAAGGCAGGGCTGGGCCTGAGAAGCAGGGCTTaGGCCCTCTCTGGGTGGACC +
Preference number: 5 (lower is better)
Translates to: GPFLWCGESHCSPKAGLGLRSRA*ALSGWT
Trigger: GGTCCACCCAGAGAGGGCCAAAGCCCTGCTTCTCAG...GCCCAGCCCTGCCTTAGGGGAGCAGTGAGACTCCCCACACCAGAGGAAGGGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556418.1
CDS-3UTR CAA 90 bp GGAGCCGGCGCGTCCCCTGGCTGCTGGTCCACAGGCTCCCCATCATTCATTCATAGCCGGTGCCGAGCCTaGCCCAGGATCATGGAGGGC +
Preference number: 5 (lower is better)
Translates to: GAGASPGCWSTGSPSFIHSRCRA*PRIMEG
Trigger: GCCCTCCATGATCCTGGGCAAGGCTCGGCACCGGCT...ATGAATGAATGATGGGGAGCCTGTGGACCAGCAGCCAGGGGACGCGCCGGCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556418.1
CDS-3UTR CAA 90 bp CCGGACTTTGGTCTTCTAAGGACACCCTCTCGGAAACGCGGCGTCTGGGAGGGGGAGGCCCGGGCCTTGTaGAGAGTACGCCGGCGCTCC +
Preference number: 5 (lower is better)
Translates to: PDFGLLRTPSRKRGVWEGEARAL*RVRRRS
Trigger: GGAGCGCCGGCGTACTCTCAACAAGGCCCGGGCCTC...CCCCTCCCAGACGCCGCGTTTCCGAGAGGGTGTCCTTAGAAGACCAAAGTCCGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555589.5
CDS-3UTR CAA 90 bp ATGGGTCCGCGGAGCTGGCCGTGCTTGGCGCCCTGGCGTGTGTCTAGCTGCTTCGTGTCTAGCTGCTTCTaGCCGGGCACAGAGCTGCGG +
Preference number: 5 (lower is better)
Translates to: MGPRSWPCLAPWRVSSCFVSSCF*PGTELR
Trigger: CCGCAGCTCTGTGCCCGGCAAGAAGCAGCTAGACAC...GAAGCAGCTAGACACACGCCAGGGCGCCAAGCACGGCCAGCTCCGCGGACCCAT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR CAA 90 bp TGCAGGGGTGGAGGCCTGTCTCTTAACCGACACCCTGAGGTGCTCCTGAGATGCGAGGCGGGGCTGGGCTaGTCCATGGGTCCGCGGAGC +
Preference number: 5 (lower is better)
Translates to: CRGGGLSLNRHPEVLLRCEAGLG*SMGPRS
Trigger: GCTCCGCGGACCCATGGACAAGCCCAGCCCCGCCTC...GCATCTCAGGAGCACCTCAGGGTGTCGGTTAAGAGACAGGCCTCCACCCCTGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR CAA 90 bp GGGCCCTTCCTCTGGTGTGGGGAGTCTCACTGCTCCCCTAAGGCAGGGCTGGGCACTGCCTGTGTGGCCTaGATTCGTCGAGCCCCGGCT +
Preference number: 5 (lower is better)
Translates to: GPFLWCGESHCSPKAGLGTACVA*IRRAPA
Trigger: AGCCGGGGCTCGACGAATCAAGGCCACACAGGCAGT...GCCCAGCCCTGCCTTAGGGGAGCAGTGAGACTCCCCACACCAGAGGAAGGGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000556418.1
CDS-3UTR CAA 90 bp TCGCAGGTCATCATGGGCGGCTGGTTCGGATGGTCTGGGGGACCTGGGGCATGGGGGACTGGGGGTTGTTaGGCTGTCCTGGGCAGCTCT +
Preference number: 5 (lower is better)
Translates to: SQVIMGGWFGWSGGPGAWGTGGC*AVLGSS
Trigger: AGAGCTGCCCAGGACAGCCAAACAACCCCCAGTCCC...CCATGCCCCAGGTCCCCCAGACCATCCGAACCAGCCGCCCATGATGACCTGCGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000555589.5
CDS-3UTR CAA 90 bp TGCTGCTCGGGCTCCAGGTACGACACGCAGATGAAGTCCTGTACGGAGGAGCGGGGGCGGGACTGGGGGTaGTTTGGCTGTCCTGGGCAG +
Preference number: 5 (lower is better)
Translates to: CCSGSRYDTQMKSCTEERGRDWG*FGCPGQ
Trigger: CTGCCCAGGACAGCCAAACAACCCCCAGTCCCGCCC...CCGCTCCTCCGTACAGGACTTCATCTGCGTGTCGTACCTGGAGCCCGAGCAGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000555589.5
CDS-3UTR CAA 90 bp TCGCAGGTCATCATGGGCGGCTGGTTCGGATGGTCTGGGGGACCTGGGGCATGGCTGAGAAGCAGGGCTTaGGCCCTCTCTGGGTGGACC +
Preference number: 5 (lower is better)
Translates to: SQVIMGGWFGWSGGPGAWLRSRA*ALSGWT
Trigger: GGTCCACCCAGAGAGGGCCAAAGCCCTGCTTCTCAG...CCATGCCCCAGGTCCCCCAGACCATCCGAACCAGCCGCCCATGATGACCTGCGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000555589.5
CDS-3UTR CAA 90 bp GCTGAACTGCTCCAGCTCCTCCTCCGTGCTGCTGGTGGAGTAGGAGTCCTGGTCAGCCGGTGCCGAGCCTaGCCCAGGATCATGGAGGGC +
Preference number: 5 (lower is better)
Translates to: AELLQLLLRAAGGVGVLVSRCRA*PRIMEG
Trigger: GCCCTCCATGATCCTGGGCAAGGCTCGGCACCGGCT...GACCAGGACTCCTACTCCACCAGCAGCACGGAGGAGGAGCTGGAGCAGTTCAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555589.5
CDS-3UTR CAA 90 bp AATGGCCCATGTCCCTCTGCTGCGTGGACGTCGCGGTCGGGAGTGCGCAGCCAGAGCATCTCCGTGAGGTaGCTGCGGGCCAGCACATAC +
Preference number: 5 (lower is better)
Translates to: NGPCPSAAWTSRSGVRSQSISVR*LRASTY
Trigger: GTATGTGCTGGCCCGCAGCAACCTCACGGAGATGCT...CTGGCTGCGCACTCCCGACCGCGACGTCCACGCAGCAGAGGGACATGGGCCATT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR CAA 90 bp TGCAGGGGTGGAGGCCTGTCTCTTAACCGACACCCTGAGGTGCTCCTGAGATGCGAGGCCCGGGCCTTGTaGAGAGTACGCCGGCGCTCC +
Preference number: 5 (lower is better)
Translates to: CRGGGLSLNRHPEVLLRCEARAL*RVRRRS
Trigger: GGAGCGCCGGCGTACTCTCAACAAGGCCCGGGCCTC...GCATCTCAGGAGCACCTCAGGGTGTCGGTTAAGAGACAGGCCTCCACCCCTGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR CAA 90 bp AGTGGCACGGGGAGCAGCTGTGGCCGGTGCTCCTTCCTAGGCCAGTCCTGGGGAAACTGTCCTGCGACGTaGGCCTGGGCACGTCATGGA +
Preference number: 5 (lower is better)
Translates to: SGTGSSCGRCSFLGQSWGNCPAT*AWARHG
Trigger: TCCATGACGTGCCCAGGCCAACGTCGCAGGACAGTT...TCCCCAGGACTGGCCTAGGAAGGAGCACCGGCCACAGCTGCTCCCCGTGCCACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR CAA 90 bp AACTGTCCTGCGACGTTGGCCTGGGCACGTCATGGAATGGCCCATGTCCCTCTGCGGAGCTGGCCGTGCTaGGCGCCCTGGCGTGTGTCT +
Preference number: 5 (lower is better)
Translates to: NCPATLAWARHGMAHVPLRSWPC*APWRVS
Trigger: AGACACACGCCAGGGCGCCAAGCACGGCCAGCTCCG...CAGAGGGACATGGGCCATTCCATGACGTGCCCAGGCCAACGTCGCAGGACAGTT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR CAA 90 bp TGGGAGGGGATGGGAACAGAGGTGTGCTGGAGCTGGCTCACACCCGCCAGGGAGCTGCCTCAGGGCTCCTaGTCCTCCATTAGGCCTCCC +
Preference number: 5 (lower is better)
Translates to: WEGMGTEVCWSWLTPARELPQGS*SSIRPP
Trigger: GGGAGGCCTAATGGAGGACAAGGAGCCCTGAGGCAG...CTCCCTGGCGGGTGTGAGCCAGCTCCAGCACACCTCTGTTCCCATCCCCTCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556418.1
CDS-3UTR CAA 90 bp CCGGGCACAGAGCTGCGGGGTCTGGGGGCACCGGGAGCTAAGAGCAGGCTCTGGTGGCTTCCCTCTTTCTaGTGGAGGATTCAGCGAGGA +
Preference number: 5 (lower is better)
Translates to: PGTELRGLGAPGAKSRLWWLPSF*WRIQRG
Trigger: TCCTCGCTGAATCCTCCACAAGAAAGAGGGAAGCCA...CCAGAGCCTGCTCTTAGCTCCCGGTGCCCCCAGACCCCGCAGCTCTGTGCCCGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR CAA 90 bp GCTCCTGCAATCTGCCACAGCTCTGGGGCGTGTCCTGTAGGGAAAGGCCCTGTTCTCTGTGTCCTGGCCTaGCTCCGTGCTCTCCCGGGG +
Preference number: 5 (lower is better)
Translates to: APAICHSSGACPVGKGPVLCVLA*LRALPG
Trigger: CCCCGGGAGAGCACGGAGCAAGGCCAGGACACAGAG...AACAGGGCCTTTCCCTACAGGACACGCCCCAGAGCTGTGGCAGATTGCAGGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR CAA 90 bp TCTCCCCACACGATGGCTCCTGCAATCTGCCACAGCTCTGGGGCGTGTCCTGTAAGCCGGTGCCGAGCCTaGCCCAGGATCATGGAGGGC +
Preference number: 5 (lower is better)
Translates to: SPHTMAPAICHSSGACPVSRCRA*PRIMEG
Trigger: GCCCTCCATGATCCTGGGCAAGGCTCGGCACCGGCT...TACAGGACACGCCCCAGAGCTGTGGCAGATTGCAGGAGCCATCGTGTGGGGAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR CAA 90 bp ATTCTCCCCACACGATGGCTCCTGCAATCTGCCACAGCTCTGGGGCGTGTCCTGGGGTCCACCAGGGCCTaGAGCTCGGTGCTCTGCAGC +
Preference number: 5 (lower is better)
Translates to: ILPTRWLLQSATALGRVLGSTRA*SSVLCS
Trigger: GCTGCAGAGCACCGAGCTCAAGGCCCTGGTGGACCC...CAGGACACGCCCCAGAGCTGTGGCAGATTGCAGGAGCCATCGTGTGGGGAGAAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR CAA 90 bp CCCTCTGCTGCGTGGACGTCGCGGTCGGGAGTGCGCAGCCAGAGGCGGGGCCAGGGCTTCAGGACACATTaGTACAAGGCAGACTCTACA +
Preference number: 5 (lower is better)
Translates to: PSAAWTSRSGVRSQRRGQGFRTH*YKADST
Trigger: TGTAGAGTCTGCCTTGTACAAATGTGTCCTGAAGCC...CTGGCCCCGCCTCTGGCTGCGCACTCCCGACCGCGACGTCCACGCAGCAGAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR CAA 90 bp TCGCAGGTCATCATGGGCGGCTGGTTCGGATGGTCTGGGGGACCTGGGGCATGGAGCATCTCCGTGAGGTaGCTGCGGGCCAGCACATAC +
Preference number: 5 (lower is better)
Translates to: SQVIMGGWFGWSGGPGAWSISVR*LRASTY
Trigger: GTATGTGCTGGCCCGCAGCAACCTCACGGAGATGCT...CCATGCCCCAGGTCCCCCAGACCATCCGAACCAGCCGCCCATGATGACCTGCGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000555589.5
CDS-3UTR CAA 90 bp TGGATAGCGGGTGGCGGGCGCCAAGCTGTCTGCGAGTCCGGCACCTGCGCCTTTCTGCACCCTTCCTGCTaGCCCAGGGAGAACACCAAT +
Preference number: 5 (lower is better)
Translates to: WIAGGGRQAVCESGTCAFLHPSC*PRENTN
Trigger: ATTGGTGTTCTCCCTGGGCAAGCAGGAAGGGTGCAG...AAAGGCGCAGGTGCCGGACTCGCAGACAGCTTGGCGCCCGCCACCCGCTATCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556418.1
CDS-3UTR CAA 90 bp GTGCTGGAGCTGGCTCACACCCGCCAGGGAGAGCCGACTGCATACACTTCTTTCGGGTGGGCCACTGGGTaGGTGGGGGTTACGCAGACC +
Preference number: 5 (lower is better)
Translates to: VLELAHTRQGEPTAYTSFGWATG*VGVTQT
Trigger: GGTCTGCGTAACCCCCACCAACCCAGTGGCCCACCC...GAAAGAAGTGTATGCAGTCGGCTCTCCCTGGCGGGTGTGAGCCAGCTCCAGCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000556418.1
CDS-3UTR CAA 90 bp CCCGGGCATCCCATAGTGCGGGCGGGCAACACAGTCCAGCCCCTTAGGGCTGCAAGAGTGGGGCAGGGATaGCTGAGGGTCACACAGCAA +
Preference number: 5 (lower is better)
Translates to: PGHPIVRAGNTVQPLRAARVGQG*LRVTQQ
Trigger: TTGCTGTGTGACCCTCAGCAATCCCTGCCCCACTCT...TGCAGCCCTAAGGGGCTGGACTGTGTTGCCCGCCCGCACTATGGGATGCCCGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556418.1
CDS CCA 90 bp AAGGTTGGCAGGGCCCAAGCCTGCCCATGCCAGGGCCAAGGTCTCTaGCCTTTGATAGGATGTGCTCCTTGCGCCCTGGGTCTCCAGCCA +
Preference number: 5 (lower is better)
Translates to: KVGRAQACPCQGQGL*PLIGCAPCALGLQP
Trigger: TGGCTGGAGACCCAGGGCGCAAGGAGCACATCCTATCAAAGGCCAGAGACCTTGGCCCTGGCATGGGCAGGCTTGGGCCCTGCCAACCTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554888.1
CDS-3UTR CAA 90 bp TCATGGAATGGCCCATGTCCCTCTGCTGCGTGGACGTCGCGGTCGGGAGTGCGCAAACCCAGACCCAGGTaGGCGATGGTCTCAAGGTCC +
Preference number: 5 (lower is better)
Translates to: SWNGPCPSAAWTSRSGVRKPRPR*AMVSRS
Trigger: GGACCTTGAGACCATCGCCAACCTGGGTCTGGGTTT...GCGCACTCCCGACCGCGACGTCCACGCAGCAGAGGGACATGGGCCATTCCATGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR CAA 90 bp CTGTGTCCTGGCCTTGCTCCGTGCTCTCCCGGGGCGTGTCCTCAGGGCCGTCTGAGCTCCACCACCTTCTaGTACAGCTTGCGGTTGTTG +
Preference number: 5 (lower is better)
Translates to: LCPGLAPCSPGACPQGRLSSTTF*YSLRLL
Trigger: CAACAACCGCAAGCTGTACAAGAAGGTGGTGGAGCT...CAGACGGCCCTGAGGACACGCCCCGGGAGAGCACGGAGCAAGGCCAGGACACAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555589.5
CDS-3UTR CAA 90 bp GGTGGCATCAGAGGTGGGCGGCAAAGGGCGTGCAGGGCAATTTCCAAGAGGTGGCCAAAGTACGAGCCCTaGTCCTGCGCCAGCTCCACC +
Preference number: 5 (lower is better)
Translates to: GGIRGGRQRACRAISKRWPKYEP*SCASST
Trigger: GGTGGAGCTGGCGCAGGACAAGGGCTCGTACTTTGG...CCACCTCTTGGAAATTGCCCTGCACGCCCTTTGCCGCCCACCTCTGATGCCACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555589.5
CDS-3UTR CAA 90 bp GTGCTGGAGCTGGCTCACACCCGCCAGGGAGAGCCGACTGCATACACTTCTTTCCTGGGCTGGGCATGTTaGGGGAACTGGGGGCAGCTG +
Preference number: 5 (lower is better)
Translates to: VLELAHTRQGEPTAYTSFLGWAC*GNWGQL
Trigger: CAGCTGCCCCCAGTTCCCCAAACATGCCCAGCCCAG...GAAAGAAGTGTATGCAGTCGGCTCTCCCTGGCGGGTGTGAGCCAGCTCCAGCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000556418.1
CDS-3UTR CAA 90 bp TGGTCTGCTCTGGGTGTCAGAGGAGTGAGTCTGCATAGCTGCTCACAGCTCTGGCGCGGGGCTGCCCCCTaGTGGCCGGATTGGGAACAG +
Preference number: 5 (lower is better)
Translates to: WSALGVRGVSLHSCSQLWRGAAP*WPDWEQ
Trigger: CTGTTCCCAATCCGGCCACAAGGGGGCAGCCCCGCG...CCAGAGCTGTGAGCAGCTATGCAGACTCACTCCTCTGACACCCAGAGCAGACCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000556418.1
CDS-3UTR CAA 90 bp ACATGCCGTCTCGGTGTCTCAGGGCTATTAGGACTTGCCCTCAGGAAGTGGCCTCTCTGTGTCCTGGCCTaGCTCCGTGCTCTCCCGGGG +
Preference number: 5 (lower is better)
Translates to: TCRLGVSGLLGLALRKWPLCVLA*LRALPG
Trigger: CCCCGGGAGAGCACGGAGCAAGGCCAGGACACAGAG...AGGCCACTTCCTGAGGGCAAGTCCTAATAGCCCTGAGACACCGAGACGGCATGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR CAA 90 bp AATGGCCCATGTCCCTCTGCTGCGTGGACGTCGCGGTCGGGAGTGCGCAGCCAGTACAGCTTGCGGTTGTaGGAGAGGAAAGCGTGGAAC +
Preference number: 5 (lower is better)
Translates to: NGPCPSAAWTSRSGVRSQYSLRL*ERKAWN
Trigger: GTTCCACGCTTTCCTCTCCAACAACCGCAAGCTGTA...CTGGCTGCGCACTCCCGACCGCGACGTCCACGCAGCAGAGGGACATGGGCCATT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR CAA 90 bp GGGCCCTTCCTCTGGTGTGGGGAGTCTCACTGCTCCCCTAAGGCAGGGCTGGGCTACAGCTTGCGGTTGTaGGAGAGGAAAGCGTGGAAC +
Preference number: 5 (lower is better)
Translates to: GPFLWCGESHCSPKAGLGYSLRL*ERKAWN
Trigger: GTTCCACGCTTTCCTCTCCAACAACCGCAAGCTGTA...GCCCAGCCCTGCCTTAGGGGAGCAGTGAGACTCCCCACACCAGAGGAAGGGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556418.1
CDS-3UTR CAA 90 bp GGTCCGCGGAGCTGGCCGTGCTTGGCGCCCTGGCGTGTGTCTAGCTGCTTCTTGTACAGCTTGCGGTTGTaGGAGAGGAAAGCGTGGAAC +
Preference number: 5 (lower is better)
Translates to: GPRSWPCLAPWRVSSCFLYSLRL*ERKAWN
Trigger: GTTCCACGCTTTCCTCTCCAACAACCGCAAGCTGTA...CAAGAAGCAGCTAGACACACGCCAGGGCGCCAAGCACGGCCAGCTCCGCGGACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR CAA 90 bp GGTCCGCGGAGCTGGCCGTGCTTGGCGCCCTGGCGTGTGTCTAGCTGCTTCTTGTTGTACAGCTTGCGGTaGTTGGAGAGGAAAGCGTGG +
Preference number: 5 (lower is better)
Translates to: GPRSWPCLAPWRVSSCFLLYSLR*LERKAW
Trigger: CCACGCTTTCCTCTCCAACAACCGCAAGCTGTACAA...CAAGAAGCAGCTAGACACACGCCAGGGCGCCAAGCACGGCCAGCTCCGCGGACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR CAA 90 bp GGGCCCTTCCTCTGGTGTGGGGAGTCTCACTGCTCCCCTAAGGCAGGGCTGGGCAGCTCCACCACCTTCTaGTACAGCTTGCGGTTGTTG +
Preference number: 5 (lower is better)
Translates to: GPFLWCGESHCSPKAGLGSSTTF*YSLRLL
Trigger: CAACAACCGCAAGCTGTACAAGAAGGTGGTGGAGCT...GCCCAGCCCTGCCTTAGGGGAGCAGTGAGACTCCCCACACCAGAGGAAGGGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556418.1
CDS-3UTR CAA 90 bp GCAGCCAGTGAACTGGGCTGGGCATGTTTGGGGAACTGGGGGCAGCTGGATTTGCCAAAGTACGAGCCCTaGTCCTGCGCCAGCTCCACC +
Preference number: 5 (lower is better)
Translates to: AASELGWACLGNWGQLDLPKYEP*SCASST
Trigger: GGTGGAGCTGGCGCAGGACAAGGGCTCGTACTTTGG...CAAATCCAGCTGCCCCCAGTTCCCCAAACATGCCCAGCCCAGTTCACTGGCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000556418.1
CDS-3UTR CAA 90 bp TGTTATTTTCACAACTGTCCTGCGACGTTGGCCTGGGCACGTCATGGAATGGCCCGGGAGGCCCGGGCCTaGTTGAGAGTACGCCGGCGC +
Preference number: 5 (lower is better)
Translates to: CYFHNCPATLAWARHGMAREARA*LRVRRR
Trigger: GCGCCGGCGTACTCTCAACAAGGCCCGGGCCTCCCG...GGCCATTCCATGACGTGCCCAGGCCAACGTCGCAGGACAGTTGTGAAAATAACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR CAA 90 bp GCGTCATGTTATTTTCACAACTGTCCTGCGACGTTGGCCTGGGCACGTCATGGACGGGAGGCCCGGGCCTaGTTGAGAGTACGCCGGCGC +
Preference number: 5 (lower is better)
Translates to: ASCYFHNCPATLAWARHGREARA*LRVRRR
Trigger: GCGCCGGCGTACTCTCAACAAGGCCCGGGCCTCCCG...TCCATGACGTGCCCAGGCCAACGTCGCAGGACAGTTGTGAAAATAACATGACGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR CAA 90 bp CCCGGGCATCCCATAGTGCGGGCGGGCAACACAGTCCAGCCCCTTAGGGCTGCATCAGAGGAGGGGCTGTaGGAGAAACTGAGTCGTCTT +
Preference number: 5 (lower is better)
Translates to: PGHPIVRAGNTVQPLRAASEEGL*EKLSRL
Trigger: AAGACGACTCAGTTTCTCCAACAGCCCCTCCTCTGA...TGCAGCCCTAAGGGGCTGGACTGTGTTGCCCGCCCGCACTATGGGATGCCCGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556418.1
CDS-3UTR CAA 90 bp CCCGGGCATCCCATAGTGCGGGCGGGCAACACAGTCCAGCCCCTTAGGGCTGCAGATGCCAAGTTGAAGTaGGCCATGGAGGACTCACAC +
Preference number: 5 (lower is better)
Translates to: PGHPIVRAGNTVQPLRAADAKLK*AMEDSH
Trigger: GTGTGAGTCCTCCATGGCCAACTTCAACTTGGCATC...TGCAGCCCTAAGGGGCTGGACTGTGTTGCCCGCCCGCACTATGGGATGCCCGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556418.1
CDS-3UTR CAA 90 bp TGGCACGGGGAGCAGCTGTGGCCGGTGCTCCTTCCTAGGCCAGTCCTGGGGAAATTGTACAGCTTGCGGTaGTTGGAGAGGAAAGCGTGG +
Preference number: 5 (lower is better)
Translates to: WHGEQLWPVLLPRPVLGKLYSLR*LERKAW
Trigger: CCACGCTTTCCTCTCCAACAACCGCAAGCTGTACAA...TTTCCCCAGGACTGGCCTAGGAAGGAGCACCGGCCACAGCTGCTCCCCGTGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR CAA 90 bp TGCCGGGCACAGAGCTGCGGGGTCTGGGGGCACCGGGAGCTAAGAGCAGGCTCTACCTTCTTGTACAGCTaGCGGTTGTTGGAGAGGAAA +
Preference number: 5 (lower is better)
Translates to: CRAQSCGVWGHRELRAGSTFLYS*RLLERK
Trigger: TTTCCTCTCCAACAACCGCAAGCTGTACAAGAAGGT...AGAGCCTGCTCTTAGCTCCCGGTGCCCCCAGACCCCGCAGCTCTGTGCCCGGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR CAA 90 bp GGGAAACTAAGCTCGGGCCCTTCTTTGCAAAGACCGAGGATGGGGTGGGTGTGGCCAAAGTACGAGCCCTaGTCCTGCGCCAGCTCCACC +
Preference number: 5 (lower is better)
Translates to: GKLSSGPSLQRPRMGWVWPKYEP*SCASST
Trigger: GGTGGAGCTGGCGCAGGACAAGGGCTCGTACTTTGG...CCACACCCACCCCATCCTCGGTCTTTGCAAAGAAGGGCCCGAGCTTAGTTTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR CAA 90 bp CCTGCACCCCAGGCGCAATGCTGGGCACGGAGGGCAGCACAGATAAGAAGGGAGAGGCAGACTCTACAATaGCTTCGAGCTCCTCCTCGG +
Preference number: 5 (lower is better)
Translates to: PAPQAQCWARRAAQIRRERQTLQ*LRAPPR
Trigger: CCGAGGAGGAGCTCGAAGCAATTGTAGAGTCTGCCT...CTCCCTTCTTATCTGTGCTGCCCTCCGTGCCCAGCATTGCGCCTGGGGTGCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556418.1
CDS-3UTR CAA 90 bp TCATGGAATGGCCCATGTCCCTCTGCTGCGTGGACGTCGCGGTCGGGAGTGCGCCCTCAGGAAGTGGCCTaGGACGAGCGTCATGTTATT +
Preference number: 5 (lower is better)
Translates to: SWNGPCPSAAWTSRSGVRPQEVA*DERHVI
Trigger: AATAACATGACGCTCGTCCAAGGCCACTTCCTGAGG...GCGCACTCCCGACCGCGACGTCCACGCAGCAGAGGGACATGGGCCATTCCATGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR CAA 90 bp TCTCCCCACACGATGGCTCCTGCAATCTGCCACAGCTCTGGGGCGTGTCCTGTAAGCTCGGGCCCTTCTTaGCAAAGACCGAGGATGGGG +
Preference number: 5 (lower is better)
Translates to: SPHTMAPAICHSSGACPVSSGPS*QRPRMG
Trigger: CCCCATCCTCGGTCTTTGCAAAGAAGGGCCCGAGCT...TACAGGACACGCCCCAGAGCTGTGGCAGATTGCAGGAGCCATCGTGTGGGGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR CAA 90 bp GCGTCATGTTATTTTCACAACTGTCCTGCGACGTTGGCCTGGGCACGTCATGGACGGAGCTGGCCGTGCTaGGCGCCCTGGCGTGTGTCT +
Preference number: 5 (lower is better)
Translates to: ASCYFHNCPATLAWARHGRSWPC*APWRVS
Trigger: AGACACACGCCAGGGCGCCAAGCACGGCCAGCTCCG...TCCATGACGTGCCCAGGCCAACGTCGCAGGACAGTTGTGAAAATAACATGACGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR CAA 90 bp TCACACAGCAAGCTAGTACAGGGCTGGGGCCAGAACTCAAGCCTCCTGTCTCCCCACACCTGCCGGGCTTaGCCTTTGCTCCCACTGCCT +
Preference number: 5 (lower is better)
Translates to: SHSKLVQGWGQNSSLLSPHTCRA*PLLPLP
Trigger: AGGCAGTGGGAGCAAAGGCAAAGCCCGGCAGGTGTG...GGGAGACAGGAGGCTTGAGTTCTGGCCCCAGCCCTGTACTAGCTTGCTGTGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556418.1
CDS-3UTR CAA 90 bp CGAGCCTTGCCCAGGATCATGGAGGGCTTCTTCTTCACGCTGGGGCTGCTGAACAAACCCAGACCCAGGTaGGCGATGGTCTCAAGGTCC +
Preference number: 5 (lower is better)
Translates to: RALPRIMEGFFFTLGLLNKPRPR*AMVSRS
Trigger: GGACCTTGAGACCATCGCCAACCTGGGTCTGGGTTT...GTTCAGCAGCCCCAGCGTGAAGAAGAAGCCCTCCATGATCCTGGGCAAGGCTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555589.5
CDS-3UTR CAA 90 bp CGTGAGGTTGCTGCGGGCCAGCACATACATGAGCACAGGCAGGAAGTCATCCGCTTTCACAGGCACAGTTaGCGTCATGGGCTGTGGGCC +
Preference number: 5 (lower is better)
Translates to: REVAAGQHIHEHRQEVIRFHRHS*RHGLWA
Trigger: GGCCCACAGCCCATGACGCAAACTGTGCCTGTGAAA...GCGGATGACTTCCTGCCTGTGCTCATGTATGTGCTGGCCCGCAGCAACCTCACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555589.5
CDS-3UTR CAA 90 bp TGTTATTTTCACAACTGTCCTGCGACGTTGGCCTGGGCACGTCATGGAATGGCCGGGCGGGACTGGGGGTaGTTTGGCTGTCCTGGGCAG +
Preference number: 5 (lower is better)
Translates to: CYFHNCPATLAWARHGMAGRDWG*FGCPGQ
Trigger: CTGCCCAGGACAGCCAAACAACCCCCAGTCCCGCCC...GGCCATTCCATGACGTGCCCAGGCCAACGTCGCAGGACAGTTGTGAAAATAACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR CAA 90 bp ATGGGTCCGCGGAGCTGGCCGTGCTTGGCGCCCTGGCGTGTGTCTAGCTGCTTCATCATGTACTCCACATaGAGAAGCATCTCCGTGAGG +
Preference number: 5 (lower is better)
Translates to: MGPRSWPCLAPWRVSSCFIMYST*RSISVR
Trigger: CCTCACGGAGATGCTTCTCAATGTGGAGTACATGAT...GAAGCAGCTAGACACACGCCAGGGCGCCAAGCACGGCCAGCTCCGCGGACCCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS CCA 90 bp GCGATGGTCTCAAGGTCCGTGAAGCTGCTGGCCTCAAGGATGGCCTaGGGTAGCCGCAGTGTGAAGGGCAGTAAGTCTCTACTGACACAG +
Preference number: 5 (lower is better)
Translates to: AMVSRSVKLLASRMA*GSRSVKGSKSLLTQ
Trigger: CTGTGTCAGTAGAGACTTACTGCCCTTCACACTGCGGCTACCCCAGGCCATCCTTGAGGCCAGCAGCTTCACGGACCTTGAGACCATCGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000216487.12
ENST00000418924.6
ENST00000620541.4
CDS CCA 90 bp CCCTGTTGCTGCCCCTACAGGAAGTTTCTTCTAGAACCCCTGCAATaGGAGGCCTGGTCCACGCAGGACTCCAGGCTGTCCTTGAAGCTG +
Preference number: 5 (lower is better)
Translates to: PCCCPYRKFLLEPLQ*EAWSTQDSRLSLKL
Trigger: CAGCTTCAAGGACAGCCTGGAGTCCTGCGTGGACCAGGCCTCCCATTGCAGGGGTTCTAGAAGAAACTTCCTGTAGGGGCAGCAACAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556385.5
CDS-3UTR CAA 90 bp GGTGGCATCAGAGGTGGGCGGCAAAGGGCGTGCAGGGCAATTTCCAAGAGGTGGTCCTCTTCCTCTCCTTaGCCAACAACTGGAACCGGA +
Preference number: 5 (lower is better)
Translates to: GGIRGGRQRACRAISKRWSSSSP*PTTGTG
Trigger: TCCGGTTCCAGTTGTTGGCAAAGGAGAGGAAGAGGA...CCACCTCTTGGAAATTGCCCTGCACGCCCTTTGCCGCCCACCTCTGATGCCACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555589.5
CDS-3UTR CAA 90 bp CCGTCTCGGTGTCTCAGGGCTATTAGGACTTGCCCTCAGGAAGTGGCCTTGGACAAACCCAGACCCAGGTaGGCGATGGTCTCAAGGTCC +
Preference number: 5 (lower is better)
Translates to: PSRCLRAIRTCPQEVALDKPRPR*AMVSRS
Trigger: GGACCTTGAGACCATCGCCAACCTGGGTCTGGGTTT...GTCCAAGGCCACTTCCTGAGGGCAAGTCCTAATAGCCCTGAGACACCGAGACGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR CAA 90 bp GGGAAACTAAGCTCGGGCCCTTCTTTGCAAAGACCGAGGATGGGGTGGGTGTGGTTTCACAGGCACAGTTaGCGTCATGGGCTGTGGGCC +
Preference number: 5 (lower is better)
Translates to: GKLSSGPSLQRPRMGWVWFHRHS*RHGLWA
Trigger: GGCCCACAGCCCATGACGCAAACTGTGCCTGTGAAA...CCACACCCACCCCATCCTCGGTCTTTGCAAAGAAGGGCCCGAGCTTAGTTTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR CAA 90 bp TGCTGCTCGGGCTCCAGGTACGACACGCAGATGAAGTCCTGTACGGAGGAGCGGTTGTACAGCTTGCGGTaGTTGGAGAGGAAAGCGTGG +
Preference number: 5 (lower is better)
Translates to: CCSGSRYDTQMKSCTEERLYSLR*LERKAW
Trigger: CCACGCTTTCCTCTCCAACAACCGCAAGCTGTACAA...CCGCTCCTCCGTACAGGACTTCATCTGCGTGTCGTACCTGGAGCCCGAGCAGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555589.5
CDS-3UTR CAA 90 bp AACTGGCAAAGCTCAGCCGGTGCCGAGCCTTGCCCAGGATCATGGAGGGCTTCTAGGCAGACTCTACAATaGCTTCGAGCTCCTCCTCGG +
Preference number: 5 (lower is better)
Translates to: NWQSSAGAEPCPGSWRASRQTLQ*LRAPPR
Trigger: CCGAGGAGGAGCTCGAAGCAATTGTAGAGTCTGCCT...AGAAGCCCTCCATGATCCTGGGCAAGGCTCGGCACCGGCTGAGCTTTGCCAGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555589.5
CDS-3UTR CAA 90 bp GGTGGCATCAGAGGTGGGCGGCAAAGGGCGTGCAGGGCAATTTCCAAGAGGTGGACTAACTGGTTCTCCTaGAGCTGCTGCAGCGAACCA +
Preference number: 5 (lower is better)
Translates to: GGIRGGRQRACRAISKRWTNWFS*SCCSEP
Trigger: TGGTTCGCTGCAGCAGCTCAAGGAGAACCAGTTAGT...CCACCTCTTGGAAATTGCCCTGCACGCCCTTTGCCGCCCACCTCTGATGCCACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555589.5
CDS GCA 90 bp AGCCTGCCCATGCCAGGGCCAAGGTCTCTGGCCTTTGATAGGATGTaGTCCTTGCGCCCTGGGTCTCCAGCCATTCAGATGACTGTAAAG +
Preference number: 5 (lower is better)
Translates to: SLPMPGPRSLAFDRM*SLRPGSPAIQMTVK
Trigger: CTTTACAGTCATCTGAATGGCTGGAGACCCAGGGCGCAAGGAGCACATCCTATCAAAGGCCAGAGACCTTGGCCCTGGCATGGGCAGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554888.1
CDS GCA 90 bp CTCACCTCCCCTTCCTCCCTGAGAAACTCCTCTCCGGCTTCACCCTaGCATCTTGGGTGTGGCAGATACTTGCAAGTGGGTGTGAGGGTT +
Preference number: 5 (lower is better)
Translates to: LTSPSSLRNSSPASP*HLGCGRYLQVGVRV
Trigger: AACCCTCACACCCACTTGCAAGTATCTGCCACACCCAAGATGGCAGGGTGAAGCCGGAGAGGAGTTTCTCAGGGAGGAAGGGGAGGTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557762.1
CDS CCA 90 bp AGCATGTTGACGGACACTCGCTTCTCCTTCTCACGCTCTAAGCAATaGTTCTGCTCCAGTGAGGGTCCCGAAGGCAAGCATGGGGAGCGG +
Preference number: 5 (lower is better)
Translates to: SMLTDTRFSFSRSKQ*FCSSEGPEGKHGER
Trigger: CCGCTCCCCATGCTTGCCTTCGGGACCCTCACTGGAGCAGAACCATTGCTTAGAGCGTGAGAAGGAGAAGCGAGTGTCCGTCAACATGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418924.6
ENST00000555908.5
CDS-3UTR CAA 90 bp GCCCTCAGGAAGTGGCCTTGGACGAGCGTCATGTTATTTTCACAACTGTCCTGCCTGAGAAGCAGGGCTTaGGCCCTCTCTGGGTGGACC +
Preference number: 5 (lower is better)
Translates to: ALRKWPWTSVMLFSQLSCLRSRA*ALSGWT
Trigger: GGTCCACCCAGAGAGGGCCAAAGCCCTGCTTCTCAG...GCAGGACAGTTGTGAAAATAACATGACGCTCGTCCAAGGCCACTTCCTGAGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR CAA 90 bp AACTGGCAAAGCTCAGCCGGTGCCGAGCCTTGCCCAGGATCATGGAGGGCTTCTTACAGCTTGCGGTTGTaGGAGAGGAAAGCGTGGAAC +
Preference number: 5 (lower is better)
Translates to: NWQSSAGAEPCPGSWRASYSLRL*ERKAWN
Trigger: GTTCCACGCTTTCCTCTCCAACAACCGCAAGCTGTA...AGAAGCCCTCCATGATCCTGGGCAAGGCTCGGCACCGGCTGAGCTTTGCCAGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555589.5
CDS-3UTR CAA 90 bp GCTCCTGCAATCTGCCACAGCTCTGGGGCGTGTCCTGTAGGGAAAGGCCCTGTTAGCTCCACCACCTTCTaGTACAGCTTGCGGTTGTTG +
Preference number: 5 (lower is better)
Translates to: APAICHSSGACPVGKGPVSSTTF*YSLRLL
Trigger: CAACAACCGCAAGCTGTACAAGAAGGTGGTGGAGCT...AACAGGGCCTTTCCCTACAGGACACGCCCCAGAGCTGTGGCAGATTGCAGGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR CAA 90 bp GTCCTGGGGAAACTAAGCTCGGGCCCTTCTTTGCAAAGACCGAGGATGGGGTGGAGGCAGACTCTACAATaGCTTCGAGCTCCTCCTCGG +
Preference number: 5 (lower is better)
Translates to: VLGKLSSGPSLQRPRMGWRQTLQ*LRAPPR
Trigger: CCGAGGAGGAGCTCGAAGCAATTGTAGAGTCTGCCT...CCACCCCATCCTCGGTCTTTGCAAAGAAGGGCCCGAGCTTAGTTTCCCCAGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR CAA 90 bp GGGGAGCAGCTGTGGCCGGTGCTCCTTCCTAGGCCAGTCCTGGGGAAACTAAGCGGCTTCAGGACACATTaGTACAAGGCAGACTCTACA +
Preference number: 5 (lower is better)
Translates to: GEQLWPVLLPRPVLGKLSGFRTH*YKADST
Trigger: TGTAGAGTCTGCCTTGTACAAATGTGTCCTGAAGCC...GCTTAGTTTCCCCAGGACTGGCCTAGGAAGGAGCACCGGCCACAGCTGCTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR CAA 90 bp TGCAGGGGTGGAGGCCTGTCTCTTAACCGACACCCTGAGGTGCTCCTGAGATGCACTAACTGGTTCTCCTaGAGCTGCTGCAGCGAACCA +
Preference number: 5 (lower is better)
Translates to: CRGGGLSLNRHPEVLLRCTNWFS*SCCSEP
Trigger: TGGTTCGCTGCAGCAGCTCAAGGAGAACCAGTTAGT...GCATCTCAGGAGCACCTCAGGGTGTCGGTTAAGAGACAGGCCTCCACCCCTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS TCA 90 bp CCCGGCGAACCAGGAACATCGAGGTCTCACCCAGAGCCAGCATGTTaGCGGACACTCGCTTCTCCTTCTCACGCTCTAAGCAATGGTTCT +
Preference number: 5 (lower is better)
Translates to: PGEPGTSRSHPEPAC*RTLASPSHALSNGS
Trigger: AGAACCATTGCTTAGAGCGTGAGAAGGAGAAGCGAGTGTCCGTCAACATGCTGGCTCTGGGTGAGACCTCGATGTTCCTGGTTCGCCGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418924.6
ENST00000555908.5
CDS GCA 90 bp TTGACGGACACTCGCTTCTCCTTCTCACGCTCTAAGCAATGGTTCTaGTCCAGTGAGGGTCCCGAAGGCAAGCATGGGGAGCGGGATTCT +
Preference number: 5 (lower is better)
Translates to: LTDTRFSFSRSKQWF*SSEGPEGKHGERDS
Trigger: AGAATCCCGCTCCCCATGCTTGCCTTCGGGACCCTCACTGGAGCAGAACCATTGCTTAGAGCGTGAGAAGGAGAAGCGAGTGTCCGTCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418924.6
ENST00000555908.5
CDS CCA 90 bp GCGATGGTCTCAAGGTCCGTGAAGCTGCTGGCCTCAAGGATGGCCTaGGGTAGCCGCAGTGTGAAGGGCAGTAAGTCTTCGACTTTTCTT +
Preference number: 5 (lower is better)
Translates to: AMVSRSVKLLASRMA*GSRSVKGSKSSTFL
Trigger: AAGAAAAGTCGAAGACTTACTGCCCTTCACACTGCGGCTACCCCAGGCCATCCTTGAGGCCAGCAGCTTCACGGACCTTGAGACCATCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555589.5
CDS-3UTR CAA 90 bp CGTCTCGGTGTCTCAGGGCTATTAGGACTTGCCCTCAGGAAGTGGCCTTGGACGTCCTCTTCCTCTCCTTaGCCAACAACTGGAACCGGA +
Preference number: 5 (lower is better)
Translates to: RLGVSGLLGLALRKWPWTSSSSP*PTTGTG
Trigger: TCCGGTTCCAGTTGTTGGCAAAGGAGAGGAAGAGGA...CGTCCAAGGCCACTTCCTGAGGGCAAGTCCTAATAGCCCTGAGACACCGAGACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR CAA 90 bp ACACCTAGGTCAGTGGTGGTGGTGGCCAGGATCACTAACTGGTTCTCCTTGAGCAGGCAGTTTTTCGGGTaGGCTGGCAGACAAAGCCGC +
Preference number: 5 (lower is better)
Translates to: TPRSVVVVARITNWFSLSRQFFG*AGRQSR
Trigger: GCGGCTTTGTCTGCCAGCCAACCCGAAAAACTGCCT...GCTCAAGGAGAACCAGTTAGTGATCCTGGCCACCACCACCACTGACCTAGGTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555589.5
CDS-3UTR CAA 90 bp AAGTGGCCTTGGACGAGCGTCATGTTATTTTCACAACTGTCCTGCGACGTTGGCGGGACTGGGGGTTGTTaGGCTGTCCTGGGCAGCTCT +
Preference number: 5 (lower is better)
Translates to: KWPWTSVMLFSQLSCDVGGTGGC*AVLGSS
Trigger: AGAGCTGCCCAGGACAGCCAAACAACCCCCAGTCCC...GCCAACGTCGCAGGACAGTTGTGAAAATAACATGACGCTCGTCCAAGGCCACTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR CAA 90 bp GTCTCATTCCTCCTGCACCCTTCCTGCTTGCCCAGGGAGAACACCAATGCCTGCTTGTACAGCTTGCGGTaGTTGGAGAGGAAAGCGTGG +
Preference number: 5 (lower is better)
Translates to: VSFLLHPSCLPRENTNACLYSLR*LERKAW
Trigger: CCACGCTTTCCTCTCCAACAACCGCAAGCTGTACAA...GCAGGCATTGGTGTTCTCCCTGGGCAAGCAGGAAGGGTGCAGGAGGAATGAGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556418.1
CDS-3UTR CAA 90 bp GGGAAACTAAGCTCGGGCCCTTCTTTGCAAAGACCGAGGATGGGGTGGGTGTGGAGCTCCACCACCTTCTaGTACAGCTTGCGGTTGTTG +
Preference number: 5 (lower is better)
Translates to: GKLSSGPSLQRPRMGWVWSSTTF*YSLRLL
Trigger: CAACAACCGCAAGCTGTACAAGAAGGTGGTGGAGCT...CCACACCCACCCCATCCTCGGTCTTTGCAAAGAAGGGCCCGAGCTTAGTTTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR CAA 90 bp GATGGCTTCCTTCAGGGGCTTCAGGACACATTTGTACAAGGCAGACTCTACAATGGGTCCACCAGGGCCTaGAGCTCGGTGCTCTGCAGC +
Preference number: 5 (lower is better)
Translates to: DGFLQGLQDTFVQGRLYNGSTRA*SSVLCS
Trigger: GCTGCAGAGCACCGAGCTCAAGGCCCTGGTGGACCC...ATTGTAGAGTCTGCCTTGTACAAATGTGTCCTGAAGCCCCTGAAGGAAGCCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555589.5
CDS-3UTR CAA 90 bp CGTCTCGGTGTCTCAGGGCTATTAGGACTTGCCCTCAGGAAGTGGCCTTGGACGACTAACTGGTTCTCCTaGAGCTGCTGCAGCGAACCA +
Preference number: 5 (lower is better)
Translates to: RLGVSGLLGLALRKWPWTTNWFS*SCCSEP
Trigger: TGGTTCGCTGCAGCAGCTCAAGGAGAACCAGTTAGT...CGTCCAAGGCCACTTCCTGAGGGCAAGTCCTAATAGCCCTGAGACACCGAGACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS CCA 90 bp TGCCCCTACAGGAAGTTTCTTCTAGAACCCCTGCAATGGGAGGCCTaGTCCACGCAGGACTCCAGGCTGTCCTTGAAGCTGATGATACAG +
Preference number: 5 (lower is better)
Translates to: CPYRKFLLEPLQWEA*STQDSRLSLKLMIQ
Trigger: CTGTATCATCAGCTTCAAGGACAGCCTGGAGTCCTGCGTGGACCAGGCCTCCCATTGCAGGGGTTCTAGAAGAAACTTCCTGTAGGGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556385.5
CDS-3UTR CAA 90 bp GCCCTCAGGAAGTGGCCTTGGACGAGCGTCATGTTATTTTCACAACTGTCCTGCTTTCACAGGCACAGTTaGCGTCATGGGCTGTGGGCC +
Preference number: 5 (lower is better)
Translates to: ALRKWPWTSVMLFSQLSCFHRHS*RHGLWA
Trigger: GGCCCACAGCCCATGACGCAAACTGTGCCTGTGAAA...GCAGGACAGTTGTGAAAATAACATGACGCTCGTCCAAGGCCACTTCCTGAGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR CAA 90 bp TCACAACTGTCCTGCGACGTTGGCCTGGGCACGTCATGGAATGGCCCATGTCCCACCTTCTTGTACAGCTaGCGGTTGTTGGAGAGGAAA +
Preference number: 5 (lower is better)
Translates to: SQLSCDVGLGTSWNGPCPTFLYS*RLLERK
Trigger: TTTCCTCTCCAACAACCGCAAGCTGTACAAGAAGGT...GGGACATGGGCCATTCCATGACGTGCCCAGGCCAACGTCGCAGGACAGTTGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR CAA 90 bp TGCAGGGGTGGAGGCCTGTCTCTTAACCGACACCCTGAGGTGCTCCTGAGATGCATCATGTACTCCACATaGAGAAGCATCTCCGTGAGG +
Preference number: 5 (lower is better)
Translates to: CRGGGLSLNRHPEVLLRCIMYST*RSISVR
Trigger: CCTCACGGAGATGCTTCTCAATGTGGAGTACATGAT...GCATCTCAGGAGCACCTCAGGGTGTCGGTTAAGAGACAGGCCTCCACCCCTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR CAA 90 bp CCGAGCCTTGCCCAGGATCATGGAGGGCTTCTTCTTCACGCTGGGGCTGCTGAAATCATGTACTCCACATaGAGAAGCATCTCCGTGAGG +
Preference number: 5 (lower is better)
Translates to: PSLAQDHGGLLLHAGAAEIMYST*RSISVR
Trigger: CCTCACGGAGATGCTTCTCAATGTGGAGTACATGAT...TTCAGCAGCCCCAGCGTGAAGAAGAAGCCCTCCATGATCCTGGGCAAGGCTCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555589.5
CDS-3UTR CAA 90 bp TCATGTTATTTTCACAACTGTCCTGCGACGTTGGCCTGGGCACGTCATGGAATGGTGTCTAGCTGCTTCTaGCCGGGCACAGAGCTGCGG +
Preference number: 5 (lower is better)
Translates to: SCYFHNCPATLAWARHGMVSSCF*PGTELR
Trigger: CCGCAGCTCTGTGCCCGGCAAGAAGCAGCTAGACAC...CATTCCATGACGTGCCCAGGCCAACGTCGCAGGACAGTTGTGAAAATAACATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR CAA 90 bp GGCTTCTCAGAGGAGGGGCTGTTGGAGAAACTGAGTCGTCTTAAAGGATGGGCAGGGTTACGCAGACCCTaGGCAGCTGCTGCATTTGTC +
Preference number: 5 (lower is better)
Translates to: GFSEEGLLEKLSRLKGWAGLRRP*AAAAFV
Trigger: GACAAATGCAGCAGCTGCCAAGGGTCTGCGTAACCC...TGCCCATCCTTTAAGACGACTCAGTTTCTCCAACAGCCCCTCCTCTGAGAAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556418.1
CDS-3UTR CAA 90 bp TCACACAGCAAGCTAGTACAGGGCTGGGGCCAGAACTCAAGCCTCCTGTCTCCCACCTTCTTGTACAGCTaGCGGTTGTTGGAGAGGAAA +
Preference number: 5 (lower is better)
Translates to: SHSKLVQGWGQNSSLLSPTFLYS*RLLERK
Trigger: TTTCCTCTCCAACAACCGCAAGCTGTACAAGAAGGT...GGGAGACAGGAGGCTTGAGTTCTGGCCCCAGCCCTGTACTAGCTTGCTGTGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556418.1
CDS-3UTR CAA 90 bp GTACGAGCCCTTGTCCTGCGCCAGCTCCACCACCTTCTTGTACAGCTTGCGGTTGGCTTCAGGACACATTaGTACAAGGCAGACTCTACA +
Preference number: 5 (lower is better)
Translates to: VRALVLRQLHHLLVQLAVGFRTH*YKADST
Trigger: TGTAGAGTCTGCCTTGTACAAATGTGTCCTGAAGCC...AACCGCAAGCTGTACAAGAAGGTGGTGGAGCTGGCGCAGGACAAGGGCTCGTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555589.5
CDS-3UTR CAA 90 bp GTCTCATTCCTCCTGCACCCTTCCTGCTTGCCCAGGGAGAACACCAATGCCTGCGGCTTCAGGACACATTaGTACAAGGCAGACTCTACA +
Preference number: 5 (lower is better)
Translates to: VSFLLHPSCLPRENTNACGFRTH*YKADST
Trigger: TGTAGAGTCTGCCTTGTACAAATGTGTCCTGAAGCC...GCAGGCATTGGTGTTCTCCCTGGGCAAGCAGGAAGGGTGCAGGAGGAATGAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556418.1
CDS GCA 90 bp TGTTGGCTTCCCAAATGGAAACCTCCCTTCTCCACTTCCTCCTCGTaGCTGAGATCAAACTCTCCCAGGAGAGAAGGTCTTGTCTGTGCC +
Preference number: 5 (lower is better)
Translates to: CWLPKWKPPFSTSSS*LRSNSPRREGLVCA
Trigger: GGCACAGACAAGACCTTCTCTCCTGGGAGAGTTTGATCTCAGGCACGAGGAGGAAGTGGAGAAGGGAGGTTTCCATTTGGGAAGCCAACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554888.1
CDS-3UTR CAA 90 bp TGTTATTTTCACAACTGTCCTGCGACGTTGGCCTGGGCACGTCATGGAATGGCCTCCTCTTCCTCTCCTTaGCCAACAACTGGAACCGGA +
Preference number: 5 (lower is better)
Translates to: CYFHNCPATLAWARHGMASSSSP*PTTGTG
Trigger: TCCGGTTCCAGTTGTTGGCAAAGGAGAGGAAGAGGA...GGCCATTCCATGACGTGCCCAGGCCAACGTCGCAGGACAGTTGTGAAAATAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR CAA 90 bp TCATGTTATTTTCACAACTGTCCTGCGACGTTGGCCTGGGCACGTCATGGAATGAGGCAGTTTTTCGGGTaGGCTGGCAGACAAAGCCGC +
Preference number: 5 (lower is better)
Translates to: SCYFHNCPATLAWARHGMRQFFG*AGRQSR
Trigger: GCGGCTTTGTCTGCCAGCCAACCCGAAAAACTGCCT...CATTCCATGACGTGCCCAGGCCAACGTCGCAGGACAGTTGTGAAAATAACATGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR CAA 90 bp GCTCCACCACCTTCTTGTACAGCTTGCGGTTGTTGGAGAGGAAAGCGTGGAACATGGCTTCCCTCTTTCTaGTGGAGGATTCAGCGAGGA +
Preference number: 5 (lower is better)
Translates to: APPPSCTACGCWRGKRGTWLPSF*WRIQRG
Trigger: TCCTCGCTGAATCCTCCACAAGAAAGAGGGAAGCCA...TGTTCCACGCTTTCCTCTCCAACAACCGCAAGCTGTACAAGAAGGTGGTGGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555589.5
CDS-3UTR CAA 90 bp AAGTGGCCTTGGACGAGCGTCATGTTATTTTCACAACTGTCCTGCGACGTTGGCAGGCAGACTCTACAATaGCTTCGAGCTCCTCCTCGG +
Preference number: 5 (lower is better)
Translates to: KWPWTSVMLFSQLSCDVGRQTLQ*LRAPPR
Trigger: CCGAGGAGGAGCTCGAAGCAATTGTAGAGTCTGCCT...GCCAACGTCGCAGGACAGTTGTGAAAATAACATGACGCTCGTCCAAGGCCACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR CAA 90 bp AGTTTCCCTTTCCGTCTAATGAAGAACATGCCGTCTCGGTGTCTCAGGGCTATTAGCTCGGGCCCTTCTTaGCAAAGACCGAGGATGGGG +
Preference number: 5 (lower is better)
Translates to: SFPFRLMKNMPSRCLRAISSGPS*QRPRMG
Trigger: CCCCATCCTCGGTCTTTGCAAAGAAGGGCCCGAGCT...AATAGCCCTGAGACACCGAGACGGCATGTTCTTCATTAGACGGAAAGGGAAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS CCA 90 bp AACGCTGCTCTTTCCATATTTATTATCACTATTTCACATGAAGGTTaGCAGGGCCCAAGCCTGCCCATGCCAGGGCCAAGGTCTCTGGCC +
Preference number: 5 (lower is better)
Translates to: NAALSIFIITISHEG*QGPSLPMPGPRSLA
Trigger: GGCCAGAGACCTTGGCCCTGGCATGGGCAGGCTTGGGCCCTGCCAACCTTCATGTGAAATAGTGATAATAAATATGGAAAGAGCAGCGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554888.1
CDS-3UTR CAA 90 bp CCTGAGCCTCAGTTTCCCTTTCCGTCTAATGAAGAACATGCCGTCTCGGTGTCTTGGCTTCCCTCTTTCTaGTGGAGGATTCAGCGAGGA +
Preference number: 5 (lower is better)
Translates to: PEPQFPFPSNEEHAVSVSWLPSF*WRIQRG
Trigger: TCCTCGCTGAATCCTCCACAAGAAAGAGGGAAGCCA...AGACACCGAGACGGCATGTTCTTCATTAGACGGAAAGGGAAACTGAGGCTCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR CAA 90 bp CCTGAGCCTCAGTTTCCCTTTCCGTCTAATGAAGAACATGCCGTCTCGGTGTCTCCTCAGGAAGTGGCCTaGGACGAGCGTCATGTTATT +
Preference number: 5 (lower is better)
Translates to: PEPQFPFPSNEEHAVSVSPQEVA*DERHVI
Trigger: AATAACATGACGCTCGTCCAAGGCCACTTCCTGAGG...AGACACCGAGACGGCATGTTCTTCATTAGACGGAAAGGGAAACTGAGGCTCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216487.12
ENST00000620541.4
CDS-3UTR CAA 90 bp AGACAAGAGGAAGTGGATCACACTAGGTCATCTCTGGGGAAAATGAGAAGCCGGGGGTGTGGCAGATACTaGCAAGTGGGTGTGAGGGTT +
Preference number: 5 (lower is better)
Translates to: RQEEVDHTRSSLGKMRSRGCGRY*QVGVRV
Trigger: AACCCTCACACCCACTTGCAAGTATCTGCCACACCC...CCGGCTTCTCATTTTCCCCAGAGATGACCTAGTGTGATCCACTTCCTCTTGTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000557762.1
CDS-3UTR CAA 90 bp AGACAAGAGGAAGTGGATCACACTAGGTCATCTCTGGGGAAAATGAGAAGCCGGCTTCACCCTGCCATCTaGGGTGTGGCAGATACTTGC +
Preference number: 5 (lower is better)
Translates to: RQEEVDHTRSSLGKMRSRLHPAI*GVADTC
Trigger: GCAAGTATCTGCCACACCCAAGATGGCAGGGTGAAG...CCGGCTTCTCATTTTCCCCAGAGATGACCTAGTGTGATCCACTTCCTCTTGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557762.1
CDS-3UTR CAA 90 bp GCTCCACCACCTTCTTGTACAGCTTGCGGTTGTTGGAGAGGAAAGCGTGGAACAACCTTCTTGTACAGCTaGCGGTTGTTGGAGAGGAAA +
Preference number: 5 (lower is better)
Translates to: APPPSCTACGCWRGKRGTTFLYS*RLLERK
Trigger: TTTCCTCTCCAACAACCGCAAGCTGTACAAGAAGGT...TGTTCCACGCTTTCCTCTCCAACAACCGCAAGCTGTACAAGAAGGTGGTGGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555589.5
CDS-3UTR CAA 90 bp AGACAAGAGGAAGTGGATCACACTAGGTCATCTCTGGGGAAAATGAGAAGCCGGCCCACCGGATGGTATTaGTCTTTGCAGAGGTCGCTT +
Preference number: 5 (lower is better)
Translates to: RQEEVDHTRSSLGKMRSRPTGWY*SLQRSL
Trigger: AAGCGACCTCTGCAAAGACAAATACCATCCGGTGGG...CCGGCTTCTCATTTTCCCCAGAGATGACCTAGTGTGATCCACTTCCTCTTGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557762.1
CDS GCA 90 bp TCCCCAACGGATTCCCAGTTCTTCCCACCGGATGGTATTTGTCTTTaGAGAGGTCGCTTTCGAGAGAAAGAAACCAGCATCCAGAATTTC +
Preference number: 5 (lower is better)
Translates to: SPTDSQFFPPDGICL*RGRFREKETSIQNF
Trigger: GAAATTCTGGATGCTGGTTTCTTTCTCTCGAAAGCGACCTCTGCAAAGACAAATACCATCCGGTGGGAAGAACTGGGAATCCGTTGGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557762.1
CDS-3UTR CAA 90 bp TTGGCCATGGAGGACTCACACCATGGAAATGGACAGAAGCTAAAATCAGAGCTTACTAACTGGTTCTCCTaGAGCTGCTGCAGCGAACCA +
Preference number: 5 (lower is better)
Translates to: LAMEDSHHGNGQKLKSELTNWFS*SCCSEP
Trigger: TGGTTCGCTGCAGCAGCTCAAGGAGAACCAGTTAGT...AAGCTCTGATTTTAGCTTCTGTCCATTTCCATGGTGTGAGTCCTCCATGGCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556418.1
CDS-3UTR CAA 90 bp AGACAAGAGGAAGTGGATCACACTAGGTCATCTCTGGGGAAAATGAGAAGCCGGGGATGGTATTTGTCTTaGCAGAGGTCGCTTTCGAGA +
Preference number: 5 (lower is better)
Translates to: RQEEVDHTRSSLGKMRSRGWYLS*QRSLSR
Trigger: TCTCGAAAGCGACCTCTGCAAAGACAAATACCATCC...CCGGCTTCTCATTTTCCCCAGAGATGACCTAGTGTGATCCACTTCCTCTTGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000557762.1
CDS-3UTR CAA 90 bp TTGGCCATGGAGGACTCACACCATGGAAATGGACAGAAGCTAAAATCAGAGCTTATCATGTACTCCACATaGAGAAGCATCTCCGTGAGG +
Preference number: 5 (lower is better)
Translates to: LAMEDSHHGNGQKLKSELIMYST*RSISVR
Trigger: CCTCACGGAGATGCTTCTCAATGTGGAGTACATGAT...AAGCTCTGATTTTAGCTTCTGTCCATTTCCATGGTGTGAGTCCTCCATGGCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556418.1
CDS-3UTR CAA 90 bp GGCTTCTCAGAGGAGGGGCTGTTGGAGAAACTGAGTCGTCTTAAAGGATGGGCAGAGTCAGTTATTAAATaGATTAGCCATAGTCAGCCT +
Preference number: 5 (lower is better)
Translates to: GFSEEGLLEKLSRLKGWAESVIK*ISHSQP
Trigger: AGGCTGACTATGGCTAATCAATTTAATAACTGACTC...TGCCCATCCTTTAAGACGACTCAGTTTCTCCAACAGCCCCTCCTCTGAGAAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556418.1
CDS CCA 72 bp GTCCCGGGCGCCCGCATGTCCCTGGCTCTGGCCCTCTaGAAGGGCCAGGCCGCCGCTGCCGCCGCGCTCTGG +
Preference number: 6 (lower is better)
Translates to: VPGARMSLALAL*KGQAAAAAALW
Trigger: CCAGAGCGCGGCGGCAGCGGCGGCCTGGCCCTTCCAGAGGGCCAGAGCCAGGGACATGCGGGCGCCCGGGAC
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000216487.12
ENST00000555589.5
ENST00000620541.4
CDS GCA 72 bp GCCTGCGGCCGCTCCACCGCGAACTTCTCCGCGCACTaGGCGCACAGCGCCTGGGCCTGGGTGTCCGCCCGC +
Preference number: 6 (lower is better)
Translates to: ACGRSTANFSAH*AHSAWAWVSAR
Trigger: GCGGGCGGACACCCAGGCCCAGGCGCTGTGCGCGCAGTGCGCGGAGAAGTTCGCGGTGGAGCGGCCGCAGGC
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000216487.12
ENST00000418924.6
ENST00000620541.4
CDS GCA 72 bp CAGCGCCCGTCCACCAGCACGAACAGCCGGTGCGCCTaGGGCCGCTCCACCGCGAACTTCTCCGCGCACTGC +
Preference number: 6 (lower is better)
Translates to: QRPSTSTNSRCA*GRSTANFSAHC
Trigger: GCAGTGCGCGGAGAAGTTCGCGGTGGAGCGGCCGCAGGCGCACCGGCTGTTCGTGCTGGTGGACGGGCGCTG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000216487.12
ENST00000418924.6
ENST00000620541.4
CDS GCA 72 bp TGGAAGCAGCGCCCGTCCACCAGCACGAACAGCCGGTaGGCCTGCGGCCGCTCCACCGCGAACTTCTCCGCG +
Preference number: 6 (lower is better)
Translates to: WKQRPSTSTNSR*ACGRSTANFSA
Trigger: CGCGGAGAAGTTCGCGGTGGAGCGGCCGCAGGCGCACCGGCTGTTCGTGCTGGTGGACGGGCGCTGCTTCCA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000216487.12
ENST00000418924.6
ENST00000620541.4
CDS CCA 72 bp CCCTTGATGCAGTGCGGCAGCGCGTCGTCCGCCAGCTaGAAGCAGCGCCCGTCCACCAGCACGAACAGCCGG +
Preference number: 6 (lower is better)
Translates to: PLMQCGSASSAS*KQRPSTSTNSR
Trigger: CCGGCTGTTCGTGCTGGTGGACGGGCGCTGCTTCCAGCTGGCGGACGACGCGCTGCCGCACTGCATCAAGGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000216487.12
ENST00000418924.6
ENST00000620541.4
CDS CAA 72 bp GGCCTCACCTGTACGGAGGAGCGGGAGGCCCGGGCCTaGTTGAGAGTACGCCGGCGCTCCCAGCGGTGGATG +
Preference number: 6 (lower is better)
Translates to: GLTCTEEREARA*LRVRRRSQRWM
Trigger: CATCCACCGCTGGGAGCGCCGGCGTACTCTCAACAAGGCCCGGGCCTCCCGCTCCTCCGTACAGGTGAGGCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556418.1
CDS CAA 72 bp CGGAGTCCCTGTACGGAGGAGCGGGAGGCCCGGGCCTaGTTGAGAGTACGCCGGCGCTCCCAGCGGTGGATG +
Preference number: 6 (lower is better)
Translates to: RSPCTEEREARA*LRVRRRSQRWM
Trigger: CATCCACCGCTGGGAGCGCCGGCGTACTCTCAACAAGGCCCGGGCCTCCCGCTCCTCCGTACAGGGACTCCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553959.1
CDS CAA 90 bp CCGCTCTCAGGCCTCACCTGTACGGAGGAGCGGGAGGCCCGGGCCTaGTTGAGAGTACGCCGGCGCTCCCAGCGGTGGATGGAGTCCTGC +
Preference number: 6 (lower is better)
Translates to: PLSGLTCTEEREARA*LRVRRRSQRWMESC
Trigger: GCAGGACTCCATCCACCGCTGGGAGCGCCGGCGTACTCTCAACAAGGCCCGGGCCTCCCGCTCCTCCGTACAGGTGAGGCCTGAGAGCGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556418.1
CDS CAA 90 bp CTCTCAGGCCTCACCTGTACGGAGGAGCGGGAGGCCCGGGCCTTGTaGAGAGTACGCCGGCGCTCCCAGCGGTGGATGGAGTCCTGCACC +
Preference number: 6 (lower is better)
Translates to: LSGLTCTEEREARAL*RVRRRSQRWMESCT
Trigger: GGTGCAGGACTCCATCCACCGCTGGGAGCGCCGGCGTACTCTCAACAAGGCCCGGGCCTCCCGCTCCTCCGTACAGGTGAGGCCTGAGAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556418.1
CDS TCA 72 bp AGTCGCGCTTGGGCTCGCTGCGCAGCAGGTAGCCCTTaGTGCAGTGCGGCAGCGCGTCGTCCGCCAGCTGGA +
Preference number: 6 (lower is better)
Translates to: SRAWARCAAGSP*CSAAARRPPAG
Trigger: TCCAGCTGGCGGACGACGCGCTGCCGCACTGCATCAAGGGCTACCTGCTGCGCAGCGAGCCCAAGCGCGACT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000216487.12
ENST00000418924.6
ENST00000620541.4
CDS TCA 72 bp GTCCCTGTACGGAGGAGCGGGAGGCCCGGGCCTTGTTaGGAGTACGCCGGCGCTCCCAGCGGTGGATGGAGT +
Preference number: 6 (lower is better)
Translates to: VPVRRSGRPGPC*EYAGAPSGGWS
Trigger: ACTCCATCCACCGCTGGGAGCGCCGGCGTACTCTCAACAAGGCCCGGGCCTCCCGCTCCTCCGTACAGGGAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553959.1
CDS CAA 72 bp CTCACCTGTACGGAGGAGCGGGAGGCCCGGGCCTTGTaGAGAGTACGCCGGCGCTCCCAGCGGTGGATGGAG +
Preference number: 6 (lower is better)
Translates to: LTCTEEREARAL*RVRRRSQRWME
Trigger: CTCCATCCACCGCTGGGAGCGCCGGCGTACTCTCAACAAGGCCCGGGCCTCCCGCTCCTCCGTACAGGTGAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556418.1
CDS CAA 72 bp AGTCCCTGTACGGAGGAGCGGGAGGCCCGGGCCTTGTaGAGAGTACGCCGGCGCTCCCAGCGGTGGATGGAG +
Preference number: 6 (lower is better)
Translates to: SPCTEEREARAL*RVRRRSQRWME
Trigger: CTCCATCCACCGCTGGGAGCGCCGGCGTACTCTCAACAAGGCCCGGGCCTCCCGCTCCTCCGTACAGGGACT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553959.1
CDS TCA 72 bp TCACCTGTACGGAGGAGCGGGAGGCCCGGGCCTTGTTaGGAGTACGCCGGCGCTCCCAGCGGTGGATGGAGT +
Preference number: 6 (lower is better)
Translates to: SPVRRSGRPGPC*EYAGAPSGGWS
Trigger: ACTCCATCCACCGCTGGGAGCGCCGGCGTACTCTCAACAAGGCCCGGGCCTCCCGCTCCTCCGTACAGGTGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556418.1
CDS CAA 90 bp GGCAGGGCCCAAGCCTGCCCATGCCAGGGCCAAGGTCTCTGGCCTTaGATAGGATGTGCTCCTTGCGCCCTGGGTCTCCAGCCATTCAGA +
Preference number: 6 (lower is better)
Translates to: GRAQACPCQGQGLWP*IGCAPCALGLQPFR
Trigger: TCTGAATGGCTGGAGACCCAGGGCGCAAGGAGCACATCCTATCAAAGGCCAGAGACCTTGGCCCTGGCATGGGCAGGCTTGGGCCCTGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554888.1
CDS CAA 90 bp CCCCTGCAATGGGAGGCCTGGTCCACGCAGGACTCCAGGCTGTCCTaGAAGCTGATGATACAGGAAGCTGAGAGACAGGCCGTGAGCCAG +
Preference number: 6 (lower is better)
Translates to: PLQWEAWSTQDSRLS*KLMIQEAERQAVSQ
Trigger: CTGGCTCACGGCCTGTCTCTCAGCTTCCTGTATCATCAGCTTCAAGGACAGCCTGGAGTCCTGCGTGGACCAGGCCTCCCATTGCAGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556385.5
CDS CAA 90 bp CCCAGCTGCAGGGCGGGGTCCATGAGCTCCATCATGTACTCCACATaGAGAAGCATCTCCGTGAGGTTGCTGGGTTGCCGAGGGCCATGG +
Preference number: 6 (lower is better)
Translates to: PSCRAGSMSSIMYST*RSISVRLLGCRGPW
Trigger: CCATGGCCCTCGGCAACCCAGCAACCTCACGGAGATGCTTCTCAATGTGGAGTACATGATGGAGCTCATGGACCCCGCCCTGCAGCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553959.1
CDS GCA 72 bp AAGGAAAGTGGACACAGAGCACCAGCTGCTTCGAGCTaGTGTCCCGGCGAACCAGGAACATCCCAGCCACCA +
Preference number: 6 (lower is better)
Translates to: KESGHRAPAASS*CPGEPGTSQPP
Trigger: TGGTGGCTGGGATGTTCCTGGTTCGCCGGGACAGCAGCTCGAAGCAGCTGGTGCTCTGTGTCCACTTTCCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000216487.12
ENST00000555589.5
ENST00000556385.5
ENST00000620541.4
CDS CCA 72 bp TGCCCCTACAGGAAGTTTCTTCTAGAACCCCTGCAATaGGAGGCCTGGTCCACGCAGGACTCCAGGCTGTCC +
Preference number: 6 (lower is better)
Translates to: CPYRKFLLEPLQ*EAWSTQDSRLS
Trigger: GGACAGCCTGGAGTCCTGCGTGGACCAGGCCTCCCATTGCAGGGGTTCTAGAAGAAACTTCCTGTAGGGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556385.5
CDS CCA 72 bp TCAAGGTCCGTGAAGCTGCTGGCCTCAAGGATGGCCTaGGGTAGCCGCAGTGTGAAGGGCAGTAAGTCTTCG +
Preference number: 6 (lower is better)
Translates to: SRSVKLLASRMA*GSRSVKGSKSS
Trigger: CGAAGACTTACTGCCCTTCACACTGCGGCTACCCCAGGCCATCCTTGAGGCCAGCAGCTTCACGGACCTTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555589.5
CDS CAA 72 bp TGGGAGGCCTGGTCCACGCAGGACTCCAGGCTGTCCTaGAAGCTGATGATACAGGAAGCTGAGAGACAGGCC +
Preference number: 6 (lower is better)
Translates to: WEAWSTQDSRLS*KLMIQEAERQA
Trigger: GGCCTGTCTCTCAGCTTCCTGTATCATCAGCTTCAAGGACAGCCTGGAGTCCTGCGTGGACCAGGCCTCCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556385.5
CDS GCA 72 bp AAGGAAAGTGGACACAGAGCACCAGCTGCTTCGAGCTaGTGTCCCGGCGAACCAGGAACATCGAGGTCTCAC +
Preference number: 6 (lower is better)
Translates to: KESGHRAPAASS*CPGEPGTSRSH
Trigger: GTGAGACCTCGATGTTCCTGGTTCGCCGGGACAGCAGCTCGAAGCAGCTGGTGCTCTGTGTCCACTTTCCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418924.6
ENST00000555908.5
CDS CCA 72 bp TCAAGGTCCGTGAAGCTGCTGGCCTCAAGGATGGCCTaGGGTAGCCGCAGTGTGAAGGGCAGTAAGTCTCTA +
Preference number: 6 (lower is better)
Translates to: SRSVKLLASRMA*GSRSVKGSKSL
Trigger: TAGAGACTTACTGCCCTTCACACTGCGGCTACCCCAGGCCATCCTTGAGGCCAGCAGCTTCACGGACCTTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000216487.12
ENST00000418924.6
ENST00000554888.1
ENST00000620541.4
CDS CAA 90 bp TCCCGGCGAACCAGGAACATCGAGGTCTCACCCAGAGCCAGCATGTaGACGGACACTCGCTTCTCCTTCTCACGCTCTAAGCAATGGTTC +
Preference number: 6 (lower is better)
Translates to: SRRTRNIEVSPRASM*TDTRFSFSRSKQWF
Trigger: GAACCATTGCTTAGAGCGTGAGAAGGAGAAGCGAGTGTCCGTCAACATGCTGGCTCTGGGTGAGACCTCGATGTTCCTGGTTCGCCGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418924.6
ENST00000555908.5
CDS TCA 72 bp CCAGGAACATCGAGGTCTCACCCAGAGCCAGCATGTTaGCGGACACTCGCTTCTCCTTCTCACGCTCTAAGC +
Preference number: 6 (lower is better)
Translates to: PGTSRSHPEPAC*RTLASPSHALS
Trigger: GCTTAGAGCGTGAGAAGGAGAAGCGAGTGTCCGTCAACATGCTGGCTCTGGGTGAGACCTCGATGTTCCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418924.6
ENST00000555908.5
CDS GCA 72 bp ACTCGCTTCTCCTTCTCACGCTCTAAGCAATGGTTCTaGTCCAGTGAGGGTCCCGAAGGCAAGCATGGGGAG +
Preference number: 6 (lower is better)
Translates to: TRFSFSRSKQWF*SSEGPEGKHGE
Trigger: CTCCCCATGCTTGCCTTCGGGACCCTCACTGGAGCAGAACCATTGCTTAGAGCGTGAGAAGGAGAAGCGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418924.6
ENST00000555908.5
CDS GCA 72 bp TTTCACATGAAGGTTGGCAGGGCCCAAGCCTGCCCATaGCAGGGCCAAGGTCTCTGGCCTTTGATAGGATGT +
Preference number: 6 (lower is better)
Translates to: FHMKVGRAQACP*QGQGLWPLIGC
Trigger: ACATCCTATCAAAGGCCAGAGACCTTGGCCCTGGCATGGGCAGGCTTGGGCCCTGCCAACCTTCATGTGAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554888.1
CDS GCA 72 bp CCTTCCTCCCTGAGAAACTCCTCTCCGGCTTCACCCTaGCATCTTGGGTGTGGCAGATACTTGCAAGTGGGT +
Preference number: 6 (lower is better)
Translates to: PSSLRNSSPASP*HLGCGRYLQVG
Trigger: ACCCACTTGCAAGTATCTGCCACACCCAAGATGGCAGGGTGAAGCCGGAGAGGAGTTTCTCAGGGAGGAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557762.1
CDS CAA 72 bp GGGCCAAGGTCTCTGGCCTTTGATAGGATGTGCTCCTaGCGCCCTGGGTCTCCAGCCATTCAGATGACTGTA +
Preference number: 6 (lower is better)
Translates to: GPRSLAFDRMCS*RPGSPAIQMTV
Trigger: TACAGTCATCTGAATGGCTGGAGACCCAGGGCGCAAGGAGCACATCCTATCAAAGGCCAGAGACCTTGGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554888.1
CDS CCA 72 bp ACGGACACTCGCTTCTCCTTCTCACGCTCTAAGCAATaGTTCTGCTCCAGTGAGGGTCCCGAAGGCAAGCAT +
Preference number: 6 (lower is better)
Translates to: TDTRFSFSRSKQ*FCSSEGPEGKH
Trigger: ATGCTTGCCTTCGGGACCCTCACTGGAGCAGAACCATTGCTTAGAGCGTGAGAAGGAGAAGCGAGTGTCCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418924.6
ENST00000555908.5
CDS CAA 72 bp ACCAGGAACATCGAGGTCTCACCCAGAGCCAGCATGTaGACGGACACTCGCTTCTCCTTCTCACGCTCTAAG +
Preference number: 6 (lower is better)
Translates to: TRNIEVSPRASM*TDTRFSFSRSK
Trigger: CTTAGAGCGTGAGAAGGAGAAGCGAGTGTCCGTCAACATGCTGGCTCTGGGTGAGACCTCGATGTTCCTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418924.6
ENST00000555908.5
CDS GCA 72 bp AAGGAAAGTGGACACAGAGCACCAGCTGCTTCGAGCTaGTGTCCCGGCGAACCAGGAACATCTGAAACCAAA +
Preference number: 6 (lower is better)
Translates to: KESGHRAPAASS*CPGEPGTSETK
Trigger: TTTGGTTTCAGATGTTCCTGGTTCGCCGGGACAGCAGCTCGAAGCAGCTGGTGCTCTGTGTCCACTTTCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555891.1
CDS GCA 72 bp CCCAAATGGAAACCTCCCTTCTCCACTTCCTCCTCGTaGCTGAGATCAAACTCTCCCAGGAGAGAAGGTCTT +
Preference number: 6 (lower is better)
Translates to: PKWKPPFSTSSS*LRSNSPRREGL
Trigger: AAGACCTTCTCTCCTGGGAGAGTTTGATCTCAGGCACGAGGAGGAAGTGGAGAAGGGAGGTTTCCATTTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554888.1
CDS CAA 90 bp GGGCTCTTCCCCAACGGATTCCCAGTTCTTCCCACCGGATGGTATTaGTCTTTGCAGAGGTCGCTTTCGAGAGAAAGAAACCAGCATCCA +
Preference number: 6 (lower is better)
Translates to: GLFPNGFPVLPTGWY*SLQRSLSRERNQHP
Trigger: TGGATGCTGGTTTCTTTCTCTCGAAAGCGACCTCTGCAAAGACAAATACCATCCGGTGGGAAGAACTGGGAATCCGTTGGGGAAGAGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557762.1
CDS TCA 72 bp AATGGAAACCTCCCTTCTCCACTTCCTCCTCGTGCCTaGGATCAAACTCTCCCAGGAGAGAAGGTCTTGTCT +
Preference number: 6 (lower is better)
Translates to: NGNLPSPLPPRA*DQTLPGEKVLS
Trigger: AGACAAGACCTTCTCTCCTGGGAGAGTTTGATCTCAGGCACGAGGAGGAAGTGGAGAAGGGAGGTTTCCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554888.1
CDS TCA 72 bp CGCCCTGGGTCTCCAGCCATTCAGATGACTGTAAAGTaGACCTTTCCTTGGCTCCAGGGGAAAATGATTGTG +
Preference number: 6 (lower is better)
Translates to: RPGSPAIQMTVK*TFPWLQGKMIV
Trigger: CACAATCATTTTCCCCTGGAGCCAAGGAAAGGTTCACTTTACAGTCATCTGAATGGCTGGAGACCCAGGGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554888.1
CDS CCA 72 bp CTCTTCCCCAACGGATTCCCAGTTCTTCCCACCGGATaGTATTTGTCTTTGCAGAGGTCGCTTTCGAGAGAA +
Preference number: 6 (lower is better)
Translates to: LFPNGFPVLPTG*YLSLQRSLSRE
Trigger: TTCTCTCGAAAGCGACCTCTGCAAAGACAAATACCATCCGGTGGGAAGAACTGGGAATCCGTTGGGGAAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557762.1
CDS CAA 72 bp CCCAACGGATTCCCAGTTCTTCCCACCGGATGGTATTaGTCTTTGCAGAGGTCGCTTTCGAGAGAAAGAAAC +
Preference number: 6 (lower is better)
Translates to: PNGFPVLPTGWY*SLQRSLSRERN
Trigger: GTTTCTTTCTCTCGAAAGCGACCTCTGCAAAGACAAATACCATCCGGTGGGAAGAACTGGGAATCCGTTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557762.1
CDS GCA 72 bp GATTCCCAGTTCTTCCCACCGGATGGTATTTGTCTTTaGAGAGGTCGCTTTCGAGAGAAAGAAACCAGCATC +
Preference number: 6 (lower is better)
Translates to: DSQFFPPDGICL*RGRFREKETSI
Trigger: GATGCTGGTTTCTTTCTCTCGAAAGCGACCTCTGCAAAGACAAATACCATCCGGTGGGAAGAACTGGGAATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557762.1
CDS CAA 72 bp GGATTCCCAGTTCTTCCCACCGGATGGTATTTGTCTTaGCAGAGGTCGCTTTCGAGAGAAAGAAACCAGCAT +
Preference number: 6 (lower is better)
Translates to: GFPVLPTGWYLS*QRSLSRERNQH
Trigger: ATGCTGGTTTCTTTCTCTCGAAAGCGACCTCTGCAAAGACAAATACCATCCGGTGGGAAGAACTGGGAATCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557762.1
CDS CAA 90 bp TTCCCCAACGGATTCCCAGTTCTTCCCACCGGATGGTATTTGTCTTaGCAGAGGTCGCTTTCGAGAGAAAGAAACCAGCATCCAGAATTT +
Preference number: 6 (lower is better)
Translates to: FPNGFPVLPTGWYLS*QRSLSRERNQHPEF
Trigger: AAATTCTGGATGCTGGTTTCTTTCTCTCGAAAGCGACCTCTGCAAAGACAAATACCATCCGGTGGGAAGAACTGGGAATCCGTTGGGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557762.1