RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RIN2 (Homo sapiens)

Ensembl gene IDs: ENSG00000132669

Ensembl transcript IDs: ENST00000255006.12, ENST00000412571.1, ENST00000426012.1, ENST00000432334.2, ENST00000440354.2, ENST00000459721.5, ENST00000465815.1, ENST00000467569.5, ENST00000484638.1, ENST00000488077.1, ENST00000616029.2, ENST00000648165.1, ENST00000648440.1

Found 558 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GGAAGGAAGGCAGGGATGAAGCCATCCACAGGAGTGAGAATCACCTaGCGCACTGCATCGCAAGCATCTGCTGTTGAATTCAAAAGAACT +
Preference number: 1 (lower is better)
Translates to: GRKAGMKPSTGVRIT*RTASQASAVEFKRT
Trigger: AGTTCTTTTGAATTCAACAGCAGATGCTTGCGATGCAGTGCGTCAGGTGATTCTCACTCCTGTGGATGGCTTCATCCCTGCCTTCCTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
3UTR CCA 90 bp AACGTGAACAAGAGAACAGTACATCCGATTTCCAAAGGCATTCTGTaGCCAGTGTCAGGAATACGTTGCTTTAAGAAATCCAGCAGTCTC +
Preference number: 1 (lower is better)
Translates to: NVNKRTVHPISKGIL*PVSGIRCFKKSSSL
Trigger: GAGACTGCTGGATTTCTTAAAGCAACGTATTCCTGACACTGGCCACAGAATGCCTTTGGAAATCGGATGTACTGTTCTCTTGTTCACGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
3UTR TCA 90 bp AGGAGTGAGAATCACCTGACGCACTGCATCGCAAGCATCTGCTGTTaGATTCAAAAGAACTTGTATCTTAAGTGTTTCTTCTGCACATAT +
Preference number: 1 (lower is better)
Translates to: RSENHLTHCIASICC*IQKNLYLKCFFCTY
Trigger: ATATGTGCAGAAGAAACACTTAAGATACAAGTTCTTTTGAATTCAACAGCAGATGCTTGCGATGCAGTGCGTCAGGTGATTCTCACTCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255006.12
ENST00000440354.2
ENST00000648440.1
3UTR GCA 90 bp TCTATCTCTTTTTCTACATCTTTTGAAGAGCCTGAACCAGCAGACTaGACTCCTCAGTCCTTTGTTAGAGTTCATATTTCTCTCTCTACC +
Preference number: 1 (lower is better)
Translates to: SISFSTSFEEPEPAD*TPQSFVRVHISLST
Trigger: GGTAGAGAGAGAAATATGAACTCTAACAAAGGACTGAGGAGTGCAGTCTGCTGGTTCAGGCTCTTCAAAAGATGTAGAAAAAGAGATAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
3UTR-3UTR GCA 90 bp AGCTACCTTGCGTGGCTAAAGTTGCCCTTGGCCGAGTTGGCCTGTGGATGGCTTCAGCTCCCCTTTGGATaGACCACTGGGAAGTCCCGC +
Preference number: 2 (lower is better)
Translates to: SYLAWLKLPLAELACGWLQLPFG*TTGKSR
Trigger: GCGGGACTTCCCAGTGGTGCATCCAAAGGGGAGCTG...AAGCCATCCACAGGCCAACTCGGCCAAGGGCAACTTTAGCCACGCAAGGTAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255006.12
ENST00000440354.2
ENST00000648440.1
3UTR-3UTR GCA 90 bp AGTTGCCCTTGGCCGAGTTGGCCTGTGGATGGCTTAGTCACTACACTGAGGGGTCCCCGAGGAGGTGACTaGTTTTCAAGCTCAAGCATG +
Preference number: 2 (lower is better)
Translates to: SCPWPSWPVDGLVTTLRGPRGGD*FSSSSM
Trigger: CATGCTTGAGCTTGAAAAGCAGTCACCTCCTCGGGG...ACCCCTCAGTGTAGTGACTAAGCCATCCACAGGCCAACTCGGCCAAGGGCAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000255006.12
ENST00000440354.2
ENST00000648440.1
3UTR-3UTR GCA 90 bp CCAGCAGACTGCACTCCTCAGTCCTTTGTTAGAGTTCATATTTCTCTCTCTACCCAGCTCCCCTTTGGATaGACCACTGGGAAGTCCCGC +
Preference number: 2 (lower is better)
Translates to: PADCTPQSFVRVHISLSTQLPFG*TTGKSR
Trigger: GCGGGACTTCCCAGTGGTGCATCCAAAGGGGAGCTG...GGTAGAGAGAGAAATATGAACTCTAACAAAGGACTGAGGAGTGCAGTCTGCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
3UTR-3UTR CCA 90 bp AGCAAAACACCACTAAACGTGAACAAGAGAACAGTACATCCGATTTCCAAAGGCTGCCCTTGGCCGAGTTaGCCTGTGGATGGCTTAGTC +
Preference number: 2 (lower is better)
Translates to: SKTPLNVNKRTVHPISKGCPWPS*PVDGLV
Trigger: GACTAAGCCATCCACAGGCCAACTCGGCCAAGGGCA...GCCTTTGGAAATCGGATGTACTGTTCTCTTGTTCACGTTTAGTGGTGTTTTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
3UTR-3UTR TCA 90 bp AGCAAAACACCACTAAACGTGAACAAGAGAACAGTACATCCGATTTCCAAAGGCGGAGTGAGAATCACCTaGCGCACTGCATCGCAAGCA +
Preference number: 2 (lower is better)
Translates to: SKTPLNVNKRTVHPISKGGVRIT*RTASQA
Trigger: TGCTTGCGATGCAGTGCGTCAGGTGATTCTCACTCC...GCCTTTGGAAATCGGATGTACTGTTCTCTTGTTCACGTTTAGTGGTGTTTTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
3UTR-3UTR TCA 90 bp TGCACTCCTCAGTCCTTTGTTAGAGTTCATATTTCTCTCTCTACCTCTCTCTACAGCCATCCACAGGAGTaGGAATCACCTGACGCACTG +
Preference number: 2 (lower is better)
Translates to: CTPQSFVRVHISLSTSLYSHPQE*ESPDAL
Trigger: CAGTGCGTCAGGTGATTCTCACTCCTGTGGATGGCT...GTAGAGAGAGGTAGAGAGAGAAATATGAACTCTAACAAAGGACTGAGGAGTGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
3UTR-3UTR TCA 90 bp TGCACTCCTCAGTCCTTTGTTAGAGTTCATATTTCTCTCTCTACCTCTCTCTACAGCCAACCTAGAACCTaGCTGGGGGTAGGTAGCAAA +
Preference number: 2 (lower is better)
Translates to: CTPQSFVRVHISLSTSLYSQPRT*LGVGSK
Trigger: TTTGCTACCTACCCCCAGTCAGGTTCTAGGTTGGCT...GTAGAGAGAGGTAGAGAGAGAAATATGAACTCTAACAAAGGACTGAGGAGTGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
3UTR-3UTR TCA 90 bp ACGTGGATACAAGACCCTCATAGTTTGTGCACCTGCAAACTGGTTTTATTTAACGGAGTGAGAATCACCTaGCGCACTGCATCGCAAGCA +
Preference number: 2 (lower is better)
Translates to: TWIQDPHSLCTCKLVLFNGVRIT*RTASQA
Trigger: TGCTTGCGATGCAGTGCGTCAGGTGATTCTCACTCC...GTTAAATAAAACCAGTTTGCAGGTGCACAAACTATGAGGGTCTTGTATCCACGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
3UTR-3UTR CCA 90 bp AGCAAAACACCACTAAACGTGAACAAGAGAACAGTACATCCGATTTCCAAAGGCGAGTTGGCCTGTGGATaGCTTAGTCACTACACTGAG +
Preference number: 2 (lower is better)
Translates to: SKTPLNVNKRTVHPISKGELACG*LSHYTE
Trigger: CTCAGTGTAGTGACTAAGCCATCCACAGGCCAACTC...GCCTTTGGAAATCGGATGTACTGTTCTCTTGTTCACGTTTAGTGGTGTTTTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
3UTR-3UTR CCA 90 bp ATGCAATTCTCCATTGCCAAAAGAGAATCCTACTGTTTCACAAACCTCAGCTACGAGTTGGCCTGTGGATaGCTTAGTCACTACACTGAG +
Preference number: 2 (lower is better)
Translates to: MQFSIAKRESYCFTNLSYELACG*LSHYTE
Trigger: CTCAGTGTAGTGACTAAGCCATCCACAGGCCAACTC...GTAGCTGAGGTTTGTGAAACAGTAGGATTCTCTTTTGGCAATGGAGAATTGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255006.12
ENST00000440354.2
ENST00000648440.1
3UTR-3UTR GCA 90 bp CGCACTGCATCGCAAGCATCTGCTGTTGAATTCAAAAGAACTTGTATCTTAAGTAAACCTCAGCTACCTTaGGTGGCTAAAGTTGCCCTT +
Preference number: 2 (lower is better)
Translates to: RTASQASAVEFKRTCILSKPQLP*VAKVAL
Trigger: AAGGGCAACTTTAGCCACGCAAGGTAGCTGAGGTTT...ACTTAAGATACAAGTTCTTTTGAATTCAACAGCAGATGCTTGCGATGCAGTGCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255006.12
ENST00000440354.2
ENST00000648440.1
3UTR-3UTR GCA 90 bp CACAGTACAATAACATGTTTTTGTAACTACCTGTGTTACGTGGATACAAGACCCAATCACCTGACGCACTaGATCGCAAGCATCTGCTGT +
Preference number: 2 (lower is better)
Translates to: HSTITCFCNYLCYVDTRPNHLTH*IASICC
Trigger: ACAGCAGATGCTTGCGATGCAGTGCGTCAGGTGATT...GGGTCTTGTATCCACGTAACACAGGTAGTTACAAAAACATGTTATTGTACTGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
3UTR CAA 90 bp CATCTTTTGAAGAGCCTGAACCAGCAGACTGCACTCCTCAGTCCTTaGTTAGAGTTCATATTTCTCTCTCTACCTCTCTCTACATTCATT +
Preference number: 2 (lower is better)
Translates to: HLLKSLNQQTALLSP*LEFIFLSLPLSTFI
Trigger: AATGAATGTAGAGAGAGGTAGAGAGAGAAATATGAACTCTAACAAAGGACTGAGGAGTGCAGTCTGCTGGTTCAGGCTCTTCAAAAGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
3UTR-3UTR GCA 90 bp TTGTTAGAGTTCATATTTCTCTCTCTACCTCTCTCTACATTCATTTCTCTCCTTCCCCGAGGAGGTGACTaGTTTTCAAGCTCAAGCATG +
Preference number: 2 (lower is better)
Translates to: LLEFIFLSLPLSTFISLLPRGGD*FSSSSM
Trigger: CATGCTTGAGCTTGAAAAGCAGTCACCTCCTCGGGG...AAGGAGAGAAATGAATGTAGAGAGAGGTAGAGAGAGAAATATGAACTCTAACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
3UTR-3UTR GCA 90 bp CACAGTACAATAACATGTTTTTGTAACTACCTGTGTTACGTGGATACAAGACCCCTCTCCCCACAAAGTTaGCAAAACATCCAGTTACAG +
Preference number: 2 (lower is better)
Translates to: HSTITCFCNYLCYVDTRPLSPQS*QNIQLQ
Trigger: CTGTAACTGGATGTTTTGGCAACTTTGTGGGGAGAG...GGGTCTTGTATCCACGTAACACAGGTAGTTACAAAAACATGTTATTGTACTGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
3UTR CAA 90 bp TATTTTAAGCATAGGTGGTTCCTTCTATCTCTTTTTCTACATCTTTaGAAGAGCCTGAACCAGCAGACTGCACTCCTCAGTCCTTTGTTA +
Preference number: 2 (lower is better)
Translates to: YFKHRWFLLSLFLHL*KSLNQQTALLSPLL
Trigger: TAACAAAGGACTGAGGAGTGCAGTCTGCTGGTTCAGGCTCTTCAAAAGATGTAGAAAAAGAGATAGAAGGAACCACCTATGCTTAAAATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
3UTR-3UTR GCA 90 bp CACAGTACAATAACATGTTTTTGTAACTACCTGTGTTACGTGGATACAAGACCCGTGTCAGGAATACGTTaGTTTAAGAAATCCAGCAGT +
Preference number: 2 (lower is better)
Translates to: HSTITCFCNYLCYVDTRPVSGIR*FKKSSS
Trigger: ACTGCTGGATTTCTTAAAGCAACGTATTCCTGACAC...GGGTCTTGTATCCACGTAACACAGGTAGTTACAAAAACATGTTATTGTACTGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
3UTR-3UTR CAA 90 bp GCCGAGTTGGCCTGTGGATGGCTTAGTCACTACACTGAGGGGTCCCCGAGGAGGGCTTCCAGCTCCCCTTaGGATGCACCACTGGGAAGT +
Preference number: 3 (lower is better)
Translates to: AELACGWLSHYTEGSPRRASSSP*DAPLGS
Trigger: ACTTCCCAGTGGTGCATCCAAAGGGGAGCTGGAAGC...CCTCCTCGGGGACCCCTCAGTGTAGTGACTAAGCCATCCACAGGCCAACTCGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000255006.12
ENST00000440354.2
ENST00000648440.1
3UTR CCA 72 bp TGGCTAAAGTTGCCCTTGGCCGAGTTGGCCTGTGGATaGCTTAGTCACTACACTGAGGGGTCCCCGAGGAGG +
Preference number: 3 (lower is better)
Translates to: WLKLPLAELACG*LSHYTEGSPRR
Trigger: CCTCCTCGGGGACCCCTCAGTGTAGTGACTAAGCCATCCACAGGCCAACTCGGCCAAGGGCAACTTTAGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255006.12
ENST00000440354.2
ENST00000648440.1
3UTR TCA 72 bp GCAGGGATGAAGCCATCCACAGGAGTGAGAATCACCTaGCGCACTGCATCGCAAGCATCTGCTGTTGAATTC +
Preference number: 3 (lower is better)
Translates to: AGMKPSTGVRIT*RTASQASAVEF
Trigger: GAATTCAACAGCAGATGCTTGCGATGCAGTGCGTCAGGTGATTCTCACTCCTGTGGATGGCTTCATCCCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255006.12
ENST00000440354.2
ENST00000648440.1
3UTR-3UTR CAA 90 bp CATCTTTTGAAGAGCCTGAACCAGCAGACTGCACTCCTCAGTCCTTTGTTAGAGTTGCCCTTGGCCGAGTaGGCCTGTGGATGGCTTAGT +
Preference number: 3 (lower is better)
Translates to: HLLKSLNQQTALLSPLLELPLAE*ACGWLS
Trigger: ACTAAGCCATCCACAGGCCAACTCGGCCAAGGGCAA...CTCTAACAAAGGACTGAGGAGTGCAGTCTGCTGGTTCAGGCTCTTCAAAAGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
3UTR TCA 72 bp CTGCACATATACATACCTGTAAGCCAACCTAGAACCTaGCTGGGGGTAGGTAGCAAACAATCTCAGGACACT +
Preference number: 3 (lower is better)
Translates to: LHIYIPVSQPRT*LGVGSKQSQDT
Trigger: AGTGTCCTGAGATTGTTTGCTACCTACCCCCAGTCAGGTTCTAGGTTGGCTTACAGGTATGTATATGTGCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000255006.12
ENST00000440354.2
ENST00000648440.1
3UTR-3UTR CAA 90 bp TTCTACAAGCAAATCACACATGGAATAGATTTTGCCAAACCTCACTGCATATTTCTTGCGTGGCTAAAGTaGCCCTTGGCCGAGTTGGCC +
Preference number: 3 (lower is better)
Translates to: FYKQITHGIDFAKPHCIFLAWLK*PLAELA
Trigger: GGCCAACTCGGCCAAGGGCAACTTTAGCCACGCAAG...AAATATGCAGTGAGGTTTGGCAAAATCTATTCCATGTGTGATTTGCTTGTAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
3UTR-3UTR CAA 90 bp CATCTTTTGAAGAGCCTGAACCAGCAGACTGCACTCCTCAGTCCTTTGTTAGAGACAATCTCAGGACACTaGAACCATCAGATGCAATTC +
Preference number: 3 (lower is better)
Translates to: HLLKSLNQQTALLSPLLETISGH*NHQMQF
Trigger: GAATTGCATCTGATGGTTCAAGTGTCCTGAGATTGT...CTCTAACAAAGGACTGAGGAGTGCAGTCTGCTGGTTCAGGCTCTTCAAAAGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
3UTR-3UTR CAA 90 bp ACGTGGATACAAGACCCTCATAGTTTGTGCACCTGCAAACTGGTTTTATTTAACTCTCTCCCCACAAAGTaGCCAAAACATCCAGTTACA +
Preference number: 3 (lower is better)
Translates to: TWIQDPHSLCTCKLVLFNSLPTK*PKHPVT
Trigger: TGTAACTGGATGTTTTGGCAACTTTGTGGGGAGAGA...GTTAAATAAAACCAGTTTGCAGGTGCACAAACTATGAGGGTCTTGTATCCACGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
3UTR-3UTR CAA 90 bp CACAGTACAATAACATGTTTTTGTAACTACCTGTGTTACGTGGATACAAGACCCACAATCTCAGGACACTaGAACCATCAGATGCAATTC +
Preference number: 3 (lower is better)
Translates to: HSTITCFCNYLCYVDTRPTISGH*NHQMQF
Trigger: GAATTGCATCTGATGGTTCAAGTGTCCTGAGATTGT...GGGTCTTGTATCCACGTAACACAGGTAGTTACAAAAACATGTTATTGTACTGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
CDS-3UTR CCA 90 bp GCCGAGTTGGCCTGTGGATGGCTTAGTCACTACACTGAGGGGTCCCCGAGGAGGGCCGTGATTCAGAGCTaGGCGGCGGGGCCCTTGTGC +
Preference number: 4 (lower is better)
Translates to: AELACGWLSHYTEGSPRRAVIQS*AAGPLC
Trigger: GCACAAGGGCCCCGCCGCCCAGCTCTGAATCACGGC...CCTCCTCGGGGACCCCTCAGTGTAGTGACTAAGCCATCCACAGGCCAACTCGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
CDS-3UTR CCA 90 bp TGCCCTTGGCCGAGTTGGCCTGTGGATGGCTTAGTCACTACACTGAGGGGTCCCCGCTGCCGGCCTCCATaGCACGGGGGCCGTGATTCA +
Preference number: 4 (lower is better)
Translates to: CPWPSWPVDGLVTTLRGPRCRPP*HGGRDS
Trigger: TGAATCACGGCCCCCGTGCCATGGAGGCCGGCAGCG...GGGACCCCTCAGTGTAGTGACTAAGCCATCCACAGGCCAACTCGGCCAAGGGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
CDS-3UTR GCA 90 bp CAAGCATGTAGAAGCGGGAAGGCAAGGCTTCCAGCTCCCCTTTGGATGCACCACCCCGGAGGCTGGGCCTaGAGGACCTCTGCTGCCTCC +
Preference number: 4 (lower is better)
Translates to: QACRSGKARLPAPLWMHHPGGWA*RTSAAS
Trigger: GGAGGCAGCAGAGGTCCTGCAGGCCCAGCCTCCGGG...GTGGTGCATCCAAAGGGGAGCTGGAAGCCTTGCCTTCCCGCTTCTACATGCTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255006.12
ENST00000440354.2
ENST00000648440.1
CDS-3UTR GCA 90 bp GCCGAGTTGGCCTGTGGATGGCTTAGTCACTACACTGAGGGGTCCCCGAGGAGGCCCCGTTGGTCTGGCTaGACTCCAGCTCTGAAGGCG +
Preference number: 4 (lower is better)
Translates to: AELACGWLSHYTEGSPRRPRWSG*TPALKA
Trigger: CGCCTTCAGAGCTGGAGTGCAGCCAGACCAACGGGG...CCTCCTCGGGGACCCCTCAGTGTAGTGACTAAGCCATCCACAGGCCAACTCGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
CDS-3UTR GCA 90 bp GCCGAGTTGGCCTGTGGATGGCTTAGTCACTACACTGAGGGGTCCCCGAGGAGGACCGAGTCCGCTCCGTaGCATTCGCGTTGGGAGTCC +
Preference number: 4 (lower is better)
Translates to: AELACGWLSHYTEGSPRRTESAP*HSRWES
Trigger: GGACTCCCAACGCGAATGGCACGGAGCGGACTCGGT...CCTCCTCGGGGACCCCTCAGTGTAGTGACTAAGCCATCCACAGGCCAACTCGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
CDS-3UTR GCA 90 bp CAAGCATGTAGAAGCGGGAAGGCAAGGCTTCCAGCTCCCCTTTGGATGCACCACGGGCCCCACCTGGGCTaGCAGCTGTGCCCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: QACRSGKARLPAPLWMHHGPHLG*QLCPAP
Trigger: TGGAGCTGGGCACAGCTGGCAGCCCAGGTGGGGCCC...GTGGTGCATCCAAAGGGGAGCTGGAAGCCTTGCCTTCCCGCTTCTACATGCTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
CDS-3UTR CCA 90 bp GCCGAGTTGGCCTGTGGATGGCTTAGTCACTACACTGAGGGGTCCCCGAGGAGGACTATTAATAGCGGGTaGCGGGGGCCTGGGTGGGGG +
Preference number: 4 (lower is better)
Translates to: AELACGWLSHYTEGSPRRTINSG*RGPGWG
Trigger: CCCCCACCCAGGCCCCCGCCACCCGCTATTAATAGT...CCTCCTCGGGGACCCCTCAGTGTAGTGACTAAGCCATCCACAGGCCAACTCGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
CDS-3UTR TCA 90 bp GCCGAGTTGGCCTGTGGATGGCTTAGTCACTACACTGAGGGGTCCCCGAGGAGGGCCGGTCCAAGATGCTaGGCCTGTTGGAGAGGCTGT +
Preference number: 4 (lower is better)
Translates to: AELACGWLSHYTEGSPRRAGPRC*ACWRGC
Trigger: ACAGCCTCTCCAACAGGCTCAGCATCTTGGACCGGC...CCTCCTCGGGGACCCCTCAGTGTAGTGACTAAGCCATCCACAGGCCAACTCGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255006.12
ENST00000440354.2
ENST00000648440.1
CDS-3UTR GCA 90 bp GTCCCCGAGGAGGTGACTGCTTTTCAAGCTCAAGCATGTAGAAGCGGGAAGGCACCCGGAGGCTGGGCCTaGAGGACCTCTGCTGCCTCC +
Preference number: 4 (lower is better)
Translates to: VPEEVTAFQAQACRSGKAPGGWA*RTSAAS
Trigger: GGAGGCAGCAGAGGTCCTGCAGGCCCAGCCTCCGGG...TGCCTTCCCGCTTCTACATGCTTGAGCTTGAAAAGCAGTCACCTCCTCGGGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255006.12
ENST00000440354.2
ENST00000648440.1
CDS-3UTR GCA 90 bp GCCGAGTTGGCCTGTGGATGGCTTAGTCACTACACTGAGGGGTCCCCGAGGAGGGAAGGTTCGGGGGTTTaGTGTCAGCTGGGGAGCTCC +
Preference number: 4 (lower is better)
Translates to: AELACGWLSHYTEGSPRREGSGV*CQLGSS
Trigger: GGAGCTCCCCAGCTGACAGCAAACCCCCGAACCTTC...CCTCCTCGGGGACCCCTCAGTGTAGTGACTAAGCCATCCACAGGCCAACTCGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
CDS-3UTR GCA 90 bp GTCCCCGAGGAGGTGACTGCTTTTCAAGCTCAAGCATGTAGAAGCGGGAAGGCAGGGCCCCACCTGGGCTaGCAGCTGTGCCCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: VPEEVTAFQAQACRSGKAGPHLG*QLCPAP
Trigger: TGGAGCTGGGCACAGCTGGCAGCCCAGGTGGGGCCC...TGCCTTCCCGCTTCTACATGCTTGAGCTTGAAAAGCAGTCACCTCCTCGGGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
CDS-3UTR GCA 90 bp GCCGAGTTGGCCTGTGGATGGCTTAGTCACTACACTGAGGGGTCCCCGAGGAGGAAAGCTCGGCGATCCTaGGGACCATCCGCTTCTCCG +
Preference number: 4 (lower is better)
Translates to: AELACGWLSHYTEGSPRRKARRS*GPSASP
Trigger: CGGAGAAGCGGATGGTCCGCAGGATCGCCGAGCTTT...CCTCCTCGGGGACCCCTCAGTGTAGTGACTAAGCCATCCACAGGCCAACTCGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
CDS-3UTR CCA 90 bp GCCGAGTTGGCCTGTGGATGGCTTAGTCACTACACTGAGGGGTCCCCGAGGAGGTCAGCTGCAGCCATATaGGGTGGGTGTGGAGGAGCC +
Preference number: 4 (lower is better)
Translates to: AELACGWLSHYTEGSPRRSAAAI*GGCGGA
Trigger: GGCTCCTCCACACCCACCCCATATGGCTGCAGCTGA...CCTCCTCGGGGACCCCTCAGTGTAGTGACTAAGCCATCCACAGGCCAACTCGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255006.12
ENST00000440354.2
ENST00000648440.1
CDS-3UTR CCA 90 bp AGTTGCCCTTGGCCGAGTTGGCCTGTGGATGGCTTAGTCACTACACTGAGGGGTCGCTGCCGGCCTCCATaGCACGGGGGCCGTGATTCA +
Preference number: 4 (lower is better)
Translates to: SCPWPSWPVDGLVTTLRGRCRPP*HGGRDS
Trigger: TGAATCACGGCCCCCGTGCCATGGAGGCCGGCAGCG...ACCCCTCAGTGTAGTGACTAAGCCATCCACAGGCCAACTCGGCCAAGGGCAACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
CDS-3UTR CCA 90 bp GCCGAGTTGGCCTGTGGATGGCTTAGTCACTACACTGAGGGGTCCCCGAGGAGGCGTCCACAGAGGGGATaGTCCGGTTGGTGGTTCTCC +
Preference number: 4 (lower is better)
Translates to: AELACGWLSHYTEGSPRRRPQRG*SGWWFS
Trigger: GGAGAACCACCAACCGGACCATCCCCTCTGTGGACG...CCTCCTCGGGGACCCCTCAGTGTAGTGACTAAGCCATCCACAGGCCAACTCGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000255006.12
ENST00000440354.2
ENST00000648440.1
CDS-3UTR TCA 90 bp GCCGAGTTGGCCTGTGGATGGCTTAGTCACTACACTGAGGGGTCCCCGAGGAGGCCCGCAGCAGCAGCATaGCCTTCTTTTCCGGCGAAT +
Preference number: 4 (lower is better)
Translates to: AELACGWLSHYTEGSPRRPAAAA*PSFPAN
Trigger: ATTCGCCGGAAAAGAAGGTCATGCTGCTGCTGCGGG...CCTCCTCGGGGACCCCTCAGTGTAGTGACTAAGCCATCCACAGGCCAACTCGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000255006.12
ENST00000440354.2
ENST00000648440.1
CDS-3UTR GCA 90 bp CTGCTTTTCAAGCTCAAGCATGTAGAAGCGGGAAGGCAAGGCTTCCAGCTCCCCCCAGCGAGGCTCCACTaGACGCCGGGGACTCCCCTT +
Preference number: 4 (lower is better)
Translates to: LLFKLKHVEAGRQGFQLPPARLH*TPGTPL
Trigger: AAGGGGAGTCCCCGGCGTGCAGTGGAGCCTCGCTGG...GGGGAGCTGGAAGCCTTGCCTTCCCGCTTCTACATGCTTGAGCTTGAAAAGCAG
61% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000255006.12
CDS-3UTR GCA 90 bp GCCGAGTTGGCCTGTGGATGGCTTAGTCACTACACTGAGGGGTCCCCGAGGAGGCTGCAGGACCTCTGCTaGCTCCTCCTCACTCAGACT +
Preference number: 4 (lower is better)
Translates to: AELACGWLSHYTEGSPRRLQDLC*LLLTQT
Trigger: AGTCTGAGTGAGGAGGAGGCAGCAGAGGTCCTGCAG...CCTCCTCGGGGACCCCTCAGTGTAGTGACTAAGCCATCCACAGGCCAACTCGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255006.12
ENST00000440354.2
ENST00000648440.1
CDS-3UTR CCA 90 bp GCCGAGTTGGCCTGTGGATGGCTTAGTCACTACACTGAGGGGTCCCCGAGGAGGCATATGGGGTGGGTGTaGAGGAGCCGGTCCAAGATG +
Preference number: 4 (lower is better)
Translates to: AELACGWLSHYTEGSPRRHMGWV*RSRSKM
Trigger: CATCTTGGACCGGCTCCTCCACACCCACCCCATATG...CCTCCTCGGGGACCCCTCAGTGTAGTGACTAAGCCATCCACAGGCCAACTCGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000255006.12
ENST00000440354.2
ENST00000648440.1
CDS-3UTR CCA 90 bp AGTTGGCCTGTGGATGGCTTAGTCACTACACTGAGGGGTCCCCGAGGAGGTGACAAGATCCCCGGAGGCTaGGCCTGCAGGACCTCTGCT +
Preference number: 4 (lower is better)
Translates to: SWPVDGLVTTLRGPRGGDKIPGG*ACRTSA
Trigger: AGCAGAGGTCCTGCAGGCCCAGCCTCCGGGGATCTT...GTCACCTCCTCGGGGACCCCTCAGTGTAGTGACTAAGCCATCCACAGGCCAACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000255006.12
ENST00000440354.2
ENST00000648440.1
CDS-3UTR CCA 90 bp AGTTGGCCTGTGGATGGCTTAGTCACTACACTGAGGGGTCCCCGAGGAGGTGACCCGTGCCATTCGCGTTaGGAGTCCTTGTGCTCGGCC +
Preference number: 4 (lower is better)
Translates to: SWPVDGLVTTLRGPRGGDPCHSR*ESLCSA
Trigger: GGCCGAGCACAAGGACTCCCAACGCGAATGGCACGG...GTCACCTCCTCGGGGACCCCTCAGTGTAGTGACTAAGCCATCCACAGGCCAACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
CDS-3UTR TCA 90 bp AGTTGGCCTGTGGATGGCTTAGTCACTACACTGAGGGGTCCCCGAGGAGGTGACGAGGCTGTCATAGCCTaGGTCCCGGGCACAGGTCTT +
Preference number: 4 (lower is better)
Translates to: SWPVDGLVTTLRGPRGGDEAVIA*VPGTGL
Trigger: AAGACCTGTGCCCGGGACTCAGGCTATGACAGCCTC...GTCACCTCCTCGGGGACCCCTCAGTGTAGTGACTAAGCCATCCACAGGCCAACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255006.12
ENST00000440354.2
ENST00000648440.1
CDS-3UTR TCA 90 bp AGTTGGCCTGTGGATGGCTTAGTCACTACACTGAGGGGTCCCCGAGGAGGTGACCCTCCACGTGCCCCTTaGGGGGCTTCAAGATGCACT +
Preference number: 4 (lower is better)
Translates to: SWPVDGLVTTLRGPRGGDPPRAP*GASRCT
Trigger: AGTGCATCTTGAAGCCCCTCAAGGGGCACGTGGAGG...GTCACCTCCTCGGGGACCCCTCAGTGTAGTGACTAAGCCATCCACAGGCCAACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000255006.12
ENST00000440354.2
ENST00000648440.1
CDS-3UTR TCA 90 bp GCCGAGTTGGCCTGTGGATGGCTTAGTCACTACACTGAGGGGTCCCCGAGGAGGAGCCATCCACAGGAGTaGGAATCACCTGACGCACTG +
Preference number: 4 (lower is better)
Translates to: AELACGWLSHYTEGSPRRSHPQE*ESPDAL
Trigger: CAGTGCGTCAGGTGATTCTCACTCCTGTGGATGGCT...CCTCCTCGGGGACCCCTCAGTGTAGTGACTAAGCCATCCACAGGCCAACTCGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255006.12
ENST00000440354.2
ENST00000648440.1
CDS-3UTR GCA 90 bp TGCCCTTGGCCGAGTTGGCCTGTGGATGGCTTAGTCACTACACTGAGGGGTCCCCTGCAGGACCTCTGCTaGCTCCTCCTCACTCAGACT +
Preference number: 4 (lower is better)
Translates to: CPWPSWPVDGLVTTLRGPLQDLC*LLLTQT
Trigger: AGTCTGAGTGAGGAGGAGGCAGCAGAGGTCCTGCAG...GGGACCCCTCAGTGTAGTGACTAAGCCATCCACAGGCCAACTCGGCCAAGGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255006.12
ENST00000440354.2
ENST00000648440.1
CDS-3UTR GCA 90 bp CAAGCATGTAGAAGCGGGAAGGCAAGGCTTCCAGCTCCCCTTTGGATGCACCACGGCCTGCAGGACCTCTaGTGCCTCCTCCTCACTCAG +
Preference number: 4 (lower is better)
Translates to: QACRSGKARLPAPLWMHHGLQDL*CLLLTQ
Trigger: CTGAGTGAGGAGGAGGCAGCAGAGGTCCTGCAGGCC...GTGGTGCATCCAAAGGGGAGCTGGAAGCCTTGCCTTCCCGCTTCTACATGCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255006.12
ENST00000440354.2
ENST00000648440.1
CDS-3UTR GCA 90 bp AGCTACCTTGCGTGGCTAAAGTTGCCCTTGGCCGAGTTGGCCTGTGGATGGCTTGGCCTGCAGGACCTCTaGTGCCTCCTCCTCACTCAG +
Preference number: 4 (lower is better)
Translates to: SYLAWLKLPLAELACGWLGLQDL*CLLLTQ
Trigger: CTGAGTGAGGAGGAGGCAGCAGAGGTCCTGCAGGCC...AAGCCATCCACAGGCCAACTCGGCCAAGGGCAACTTTAGCCACGCAAGGTAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255006.12
ENST00000440354.2
ENST00000648440.1
CDS-3UTR GCA 90 bp AGTTGCCCTTGGCCGAGTTGGCCTGTGGATGGCTTAGTCACTACACTGAGGGGTCCCCGTTGGTCTGGCTaGACTCCAGCTCTGAAGGCG +
Preference number: 4 (lower is better)
Translates to: SCPWPSWPVDGLVTTLRGPRWSG*TPALKA
Trigger: CGCCTTCAGAGCTGGAGTGCAGCCAGACCAACGGGG...ACCCCTCAGTGTAGTGACTAAGCCATCCACAGGCCAACTCGGCCAAGGGCAACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
CDS-3UTR GCA 90 bp AGTTGCCCTTGGCCGAGTTGGCCTGTGGATGGCTTAGTCACTACACTGAGGGGTACCGAGTCCGCTCCGTaGCATTCGCGTTGGGAGTCC +
Preference number: 4 (lower is better)
Translates to: SCPWPSWPVDGLVTTLRGTESAP*HSRWES
Trigger: GGACTCCCAACGCGAATGGCACGGAGCGGACTCGGT...ACCCCTCAGTGTAGTGACTAAGCCATCCACAGGCCAACTCGGCCAAGGGCAACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
CDS-3UTR GCA 90 bp TGCCCTTGGCCGAGTTGGCCTGTGGATGGCTTAGTCACTACACTGAGGGGTCCCTCTGCAGCATGTCGGTaGTGGACACGTGGCACTCCT +
Preference number: 4 (lower is better)
Translates to: CPWPSWPVDGLVTTLRGPSAACR*WTRGTP
Trigger: AGGAGTGCCACGTGTCCAGCACCGACATGCTGCAGA...GGGACCCCTCAGTGTAGTGACTAAGCCATCCACAGGCCAACTCGGCCAAGGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
CDS-3UTR GCA 90 bp TGCCCTTGGCCGAGTTGGCCTGTGGATGGCTTAGTCACTACACTGAGGGGTCCCTCCTGCGGATTCCTCTaGCGCACAAGCTGCAGGTTC +
Preference number: 4 (lower is better)
Translates to: CPWPSWPVDGLVTTLRGPSCGFL*RTSCRF
Trigger: GAACCTGCAGCTTGTGCGGCAGAGGAATCCGCAGGA...GGGACCCCTCAGTGTAGTGACTAAGCCATCCACAGGCCAACTCGGCCAAGGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255006.12
ENST00000440354.2
ENST00000648440.1
CDS-3UTR GCA 90 bp AGTTGGCCTGTGGATGGCTTAGTCACTACACTGAGGGGTCCCCGAGGAGGTGACCAGCTCCCCTTTGGATaGACCACTGGGAAGTCCCGC +
Preference number: 4 (lower is better)
Translates to: SWPVDGLVTTLRGPRGGDQLPFG*TTGKSR
Trigger: GCGGGACTTCCCAGTGGTGCATCCAAAGGGGAGCTG...GTCACCTCCTCGGGGACCCCTCAGTGTAGTGACTAAGCCATCCACAGGCCAACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000255006.12
ENST00000440354.2
ENST00000648440.1
CDS-3UTR CCA 90 bp CAAGCATGTAGAAGCGGGAAGGCAAGGCTTCCAGCTCCCCTTTGGATGCACCACGACCGCGGGCGCCCATaGTCCAAGCTGTCATTTCCC +
Preference number: 4 (lower is better)
Translates to: QACRSGKARLPAPLWMHHDRGRP*SKLSFP
Trigger: GGGAAATGACAGCTTGGACCATGGGCGCCCGCGGTC...GTGGTGCATCCAAAGGGGAGCTGGAAGCCTTGCCTTCCCGCTTCTACATGCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255006.12
ENST00000440354.2
ENST00000648440.1
CDS-3UTR CCA 90 bp CAAGCATGTAGAAGCGGGAAGGCAAGGCTTCCAGCTCCCCTTTGGATGCACCACAAGATCCCCGGAGGCTaGGCCTGCAGGACCTCTGCT +
Preference number: 4 (lower is better)
Translates to: QACRSGKARLPAPLWMHHKIPGG*ACRTSA
Trigger: AGCAGAGGTCCTGCAGGCCCAGCCTCCGGGGATCTT...GTGGTGCATCCAAAGGGGAGCTGGAAGCCTTGCCTTCCCGCTTCTACATGCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255006.12
ENST00000440354.2
ENST00000648440.1
CDS-3UTR CCA 90 bp AGCTACCTTGCGTGGCTAAAGTTGCCCTTGGCCGAGTTGGCCTGTGGATGGCTTAGCACAGGGCCCCGTTaGTCTGGCTGCACTCCAGCT +
Preference number: 4 (lower is better)
Translates to: SYLAWLKLPLAELACGWLSTGPR*SGCTPA
Trigger: AGCTGGAGTGCAGCCAGACCAACGGGGCCCTGTGCT...AAGCCATCCACAGGCCAACTCGGCCAAGGGCAACTTTAGCCACGCAAGGTAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
CDS-3UTR CCA 90 bp TGCCCTTGGCCGAGTTGGCCTGTGGATGGCTTAGTCACTACACTGAGGGGTCCCAGGGGATGGTCCGGTTaGTGGTTCTCCGTTTGTGCC +
Preference number: 4 (lower is better)
Translates to: CPWPSWPVDGLVTTLRGPRGWSG*WFSVCA
Trigger: GGCACAAACGGAGAACCACCAACCGGACCATCCCCT...GGGACCCCTCAGTGTAGTGACTAAGCCATCCACAGGCCAACTCGGCCAAGGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255006.12
ENST00000440354.2
ENST00000648440.1
CDS-3UTR CCA 90 bp GCCGAGTTGGCCTGTGGATGGCTTAGTCACTACACTGAGGGGTCCCCGAGGAGGACAAAGTGGAAGATGTaGGGCTGTGGTCGGCTGTGC +
Preference number: 4 (lower is better)
Translates to: AELACGWLSHYTEGSPRRTKWKM*GCGRLC
Trigger: GCACAGCCGACCACAGCCCCACATCTTCCACTTTGT...CCTCCTCGGGGACCCCTCAGTGTAGTGACTAAGCCATCCACAGGCCAACTCGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255006.12
ENST00000440354.2
ENST00000648440.1
CDS-3UTR TCA 90 bp AGCTACCTTGCGTGGCTAAAGTTGCCCTTGGCCGAGTTGGCCTGTGGATGGCTTTCTGCAGCTGGGACTTaGCGAGCTTGGGCAGCACGA +
Preference number: 4 (lower is better)
Translates to: SYLAWLKLPLAELACGWLSAAGT*RAWAAR
Trigger: TCGTGCTGCCCAAGCTCGTCAAGTCCCAGCTGCAGA...AAGCCATCCACAGGCCAACTCGGCCAAGGGCAACTTTAGCCACGCAAGGTAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
CDS-3UTR TCA 90 bp AGTTGGCCTGTGGATGGCTTAGTCACTACACTGAGGGGTCCCCGAGGAGGTGACGAGCCATCGGCCATGTaGAAGTCCTTCAGCATGGCC +
Preference number: 4 (lower is better)
Translates to: SWPVDGLVTTLRGPRGGDEPSAM*KSFSMA
Trigger: GGCCATGCTGAAGGACTTTCACATGGCCGATGGCTC...GTCACCTCCTCGGGGACCCCTCAGTGTAGTGACTAAGCCATCCACAGGCCAACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255006.12
ENST00000440354.2
ENST00000648440.1
CDS-3UTR TCA 90 bp AGTTGGCCTGTGGATGGCTTAGTCACTACACTGAGGGGTCCCCGAGGAGGTGACCCCGCAGCAGCAGCATaGCCTTCTTTTCCGGCGAAT +
Preference number: 4 (lower is better)
Translates to: SWPVDGLVTTLRGPRGGDPAAAA*PSFPAN
Trigger: ATTCGCCGGAAAAGAAGGTCATGCTGCTGCTGCGGG...GTCACCTCCTCGGGGACCCCTCAGTGTAGTGACTAAGCCATCCACAGGCCAACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000255006.12
ENST00000440354.2
ENST00000648440.1
CDS-3UTR GCA 90 bp AGCTACCTTGCGTGGCTAAAGTTGCCCTTGGCCGAGTTGGCCTGTGGATGGCTTCGTTGGGAGTCCTTGTaGTCGGCCGTTTCAGGCCTC +
Preference number: 4 (lower is better)
Translates to: SYLAWLKLPLAELACGWLRWESL*SAVSGL
Trigger: GAGGCCTGAAACGGCCGAGCACAAGGACTCCCAACG...AAGCCATCCACAGGCCAACTCGGCCAAGGGCAACTTTAGCCACGCAAGGTAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
CDS-3UTR GCA 90 bp CAAGCATGTAGAAGCGGGAAGGCAAGGCTTCCAGCTCCCCTTTGGATGCACCACGCCGCTCAAGGTCTTTaGACCGCCCTCTGCTTCCAG +
Preference number: 4 (lower is better)
Translates to: QACRSGKARLPAPLWMHHAAQGL*TALCFQ
Trigger: CTGGAAGCAGAGGGCGGTGCAAAGACCTTGAGCGGC...GTGGTGCATCCAAAGGGGAGCTGGAAGCCTTGCCTTCCCGCTTCTACATGCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
CDS-3UTR GCA 90 bp AGTTGGCCTGTGGATGGCTTAGTCACTACACTGAGGGGTCCCCGAGGAGGTGACGTGTCCTCTGCCAGCTaGTGCCATGTCTCGTCAACG +
Preference number: 4 (lower is better)
Translates to: SWPVDGLVTTLRGPRGGDVSSAS*CHVSST
Trigger: CGTTGACGAGACATGGCAGCAGCTGGCAGAGGACAC...GTCACCTCCTCGGGGACCCCTCAGTGTAGTGACTAAGCCATCCACAGGCCAACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255006.12
ENST00000440354.2
ENST00000648440.1
CDS-3UTR GCA 90 bp GCCGAGTTGGCCTGTGGATGGCTTAGTCACTACACTGAGGGGTCCCCGAGGAGGCCCCGAGGAGGTGACTaGTTTTCAAGCTCAAGCATG +
Preference number: 4 (lower is better)
Translates to: AELACGWLSHYTEGSPRRPRGGD*FSSSSM
Trigger: CATGCTTGAGCTTGAAAAGCAGTCACCTCCTCGGGG...CCTCCTCGGGGACCCCTCAGTGTAGTGACTAAGCCATCCACAGGCCAACTCGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000255006.12
ENST00000440354.2
ENST00000648440.1
CDS-3UTR CCA 90 bp CTGCTTTTCAAGCTCAAGCATGTAGAAGCGGGAAGGCAAGGCTTCCAGCTCCCCGACCGCGGGCGCCCATaGTCCAAGCTGTCATTTCCC +
Preference number: 4 (lower is better)
Translates to: LLFKLKHVEAGRQGFQLPDRGRP*SKLSFP
Trigger: GGGAAATGACAGCTTGGACCATGGGCGCCCGCGGTC...GGGGAGCTGGAAGCCTTGCCTTCCCGCTTCTACATGCTTGAGCTTGAAAAGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255006.12
ENST00000440354.2
ENST00000648440.1
CDS-3UTR CCA 90 bp AGTTGGCCTGTGGATGGCTTAGTCACTACACTGAGGGGTCCCCGAGGAGGTGACCATATGGGGTGGGTGTaGAGGAGCCGGTCCAAGATG +
Preference number: 4 (lower is better)
Translates to: SWPVDGLVTTLRGPRGGDHMGWV*RSRSKM
Trigger: CATCTTGGACCGGCTCCTCCACACCCACCCCATATG...GTCACCTCCTCGGGGACCCCTCAGTGTAGTGACTAAGCCATCCACAGGCCAACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000255006.12
ENST00000440354.2
ENST00000648440.1
CDS-3UTR CCA 90 bp GTCCCCGAGGAGGTGACTGCTTTTCAAGCTCAAGCATGTAGAAGCGGGAAGGCATGCAGCCATATGGGGTaGGTGTGGAGGAGCCGGTCC +
Preference number: 4 (lower is better)
Translates to: VPEEVTAFQAQACRSGKACSHMG*VWRSRS
Trigger: GGACCGGCTCCTCCACACCCACCCCATATGGCTGCA...TGCCTTCCCGCTTCTACATGCTTGAGCTTGAAAAGCAGTCACCTCCTCGGGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000255006.12
ENST00000440354.2
ENST00000648440.1
CDS-3UTR CCA 90 bp AGCTACCTTGCGTGGCTAAAGTTGCCCTTGGCCGAGTTGGCCTGTGGATGGCTTTCAGCTGCAGCCATATaGGGTGGGTGTGGAGGAGCC +
Preference number: 4 (lower is better)
Translates to: SYLAWLKLPLAELACGWLSAAAI*GGCGGA
Trigger: GGCTCCTCCACACCCACCCCATATGGCTGCAGCTGA...AAGCCATCCACAGGCCAACTCGGCCAAGGGCAACTTTAGCCACGCAAGGTAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255006.12
ENST00000440354.2
ENST00000648440.1
CDS-3UTR CCA 90 bp GCCGAGTTGGCCTGTGGATGGCTTAGTCACTACACTGAGGGGTCCCCGAGGAGGGACATAGGTCAGGACTaGCAAGAAGTCATCAGCGCC +
Preference number: 4 (lower is better)
Translates to: AELACGWLSHYTEGSPRRDIGQD*QEVISA
Trigger: GGCGCTGATGACTTCTTGCCAGTCCTGACCTATGTC...CCTCCTCGGGGACCCCTCAGTGTAGTGACTAAGCCATCCACAGGCCAACTCGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255006.12
ENST00000440354.2
ENST00000648440.1
CDS-3UTR CCA 90 bp TGCCCTTGGCCGAGTTGGCCTGTGGATGGCTTAGTCACTACACTGAGGGGTCCCGGATGGTCCGGTTGGTaGTTCTCCGTTTGTGCCACT +
Preference number: 4 (lower is better)
Translates to: CPWPSWPVDGLVTTLRGPGWSGW*FSVCAT
Trigger: AGTGGCACAAACGGAGAACCACCAACCGGACCATCC...GGGACCCCTCAGTGTAGTGACTAAGCCATCCACAGGCCAACTCGGCCAAGGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255006.12
ENST00000440354.2
ENST00000648440.1
CDS-3UTR CCA 90 bp CAAGCATGTAGAAGCGGGAAGGCAAGGCTTCCAGCTCCCCTTTGGATGCACCACCGTCCACAGAGGGGATaGTCCGGTTGGTGGTTCTCC +
Preference number: 4 (lower is better)
Translates to: QACRSGKARLPAPLWMHHRPQRG*SGWWFS
Trigger: GGAGAACCACCAACCGGACCATCCCCTCTGTGGACG...GTGGTGCATCCAAAGGGGAGCTGGAAGCCTTGCCTTCCCGCTTCTACATGCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255006.12
ENST00000440354.2
ENST00000648440.1
CDS-3UTR CCA 90 bp TGCCCTTGGCCGAGTTGGCCTGTGGATGGCTTAGTCACTACACTGAGGGGTCCCCTTTGGATGCACCACTaGGAAGTCCCGCCTGTCTTC +
Preference number: 4 (lower is better)
Translates to: CPWPSWPVDGLVTTLRGPLWMHH*EVPPVF
Trigger: GAAGACAGGCGGGACTTCCCAGTGGTGCATCCAAAG...GGGACCCCTCAGTGTAGTGACTAAGCCATCCACAGGCCAACTCGGCCAAGGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255006.12
ENST00000440354.2
ENST00000648440.1
CDS-3UTR TCA 90 bp AGTTGCCCTTGGCCGAGTTGGCCTGTGGATGGCTTAGTCACTACACTGAGGGGTGTTTCAGGCCTCCACTaGGGTCCTGGCTGTGCACTT +
Preference number: 4 (lower is better)
Translates to: SCPWPSWPVDGLVTTLRGVSGLH*GPGCAL
Trigger: AAGTGCACAGCCAGGACCTCAGTGGAGGCCTGAAAC...ACCCCTCAGTGTAGTGACTAAGCCATCCACAGGCCAACTCGGCCAAGGGCAACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
CDS-3UTR TCA 90 bp CAAGCATGTAGAAGCGGGAAGGCAAGGCTTCCAGCTCCCCTTTGGATGCACCACGAGCCATCGGCCATGTaGAAGTCCTTCAGCATGGCC +
Preference number: 4 (lower is better)
Translates to: QACRSGKARLPAPLWMHHEPSAM*KSFSMA
Trigger: GGCCATGCTGAAGGACTTTCACATGGCCGATGGCTC...GTGGTGCATCCAAAGGGGAGCTGGAAGCCTTGCCTTCCCGCTTCTACATGCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255006.12
ENST00000440354.2
ENST00000648440.1
CDS-3UTR TCA 90 bp CAAGCATGTAGAAGCGGGAAGGCAAGGCTTCCAGCTCCCCTTTGGATGCACCACCCCGCAGCAGCAGCATaGCCTTCTTTTCCGGCGAAT +
Preference number: 4 (lower is better)
Translates to: QACRSGKARLPAPLWMHHPAAAA*PSFPAN
Trigger: ATTCGCCGGAAAAGAAGGTCATGCTGCTGCTGCGGG...GTGGTGCATCCAAAGGGGAGCTGGAAGCCTTGCCTTCCCGCTTCTACATGCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000255006.12
ENST00000440354.2
ENST00000648440.1
CDS-3UTR TCA 90 bp GTCCCCGAGGAGGTGACTGCTTTTCAAGCTCAAGCATGTAGAAGCGGGAAGGCAGGTGTCTCTGGTTTCTaGGCTGAGCAGTCGCGCTGC +
Preference number: 4 (lower is better)
Translates to: VPEEVTAFQAQACRSGKAGVSGF*AEQSRC
Trigger: GCAGCGCGACTGCTCAGCTCAGAAACCAGAGACACC...TGCCTTCCCGCTTCTACATGCTTGAGCTTGAAAAGCAGTCACCTCCTCGGGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255006.12
ENST00000440354.2
ENST00000648440.1
CDS-3UTR TCA 90 bp AGTTGGCCTGTGGATGGCTTAGTCACTACACTGAGGGGTCCCCGAGGAGGTGACGGAGTGAGAATCACCTaGCGCACTGCATCGCAAGCA +
Preference number: 4 (lower is better)
Translates to: SWPVDGLVTTLRGPRGGDGVRIT*RTASQA
Trigger: TGCTTGCGATGCAGTGCGTCAGGTGATTCTCACTCC...GTCACCTCCTCGGGGACCCCTCAGTGTAGTGACTAAGCCATCCACAGGCCAACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255006.12
ENST00000440354.2
ENST00000648440.1
CDS-3UTR GCA 90 bp TGCCCTTGGCCGAGTTGGCCTGTGGATGGCTTAGTCACTACACTGAGGGGTCCCTCCAGAAAAGAAGCCTaGTTCTTCAGCCGGGGTGGA +
Preference number: 4 (lower is better)
Translates to: CPWPSWPVDGLVTTLRGPSRKEA*FFSRGG
Trigger: TCCACCCCGGCTGAAGAAGCAGGCTTCTTTTCTGGA...GGGACCCCTCAGTGTAGTGACTAAGCCATCCACAGGCCAACTCGGCCAAGGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
CDS-3UTR GCA 90 bp CTGCTTTTCAAGCTCAAGCATGTAGAAGCGGGAAGGCAAGGCTTCCAGCTCCCCCGTAGTCCTCCAGGCTaGTGTTGGTGTCCGCCTCGT +
Preference number: 4 (lower is better)
Translates to: LLFKLKHVEAGRQGFQLPRSPPG*CWCPPR
Trigger: ACGAGGCGGACACCAACAGCAGCCTGGAGGACTACG...GGGGAGCTGGAAGCCTTGCCTTCCCGCTTCTACATGCTTGAGCTTGAAAAGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
CDS-3UTR GCA 90 bp AGTTGCCCTTGGCCGAGTTGGCCTGTGGATGGCTTAGTCACTACACTGAGGGGTAACTGCCGGATGGTCTaGAGCATGTCGGTGCTGGAC +
Preference number: 4 (lower is better)
Translates to: SCPWPSWPVDGLVTTLRGNCRMV*SMSVLD
Trigger: GTCCAGCACCGACATGCTGCAGACCATCCGGCAGTT...ACCCCTCAGTGTAGTGACTAAGCCATCCACAGGCCAACTCGGCCAAGGGCAACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
CDS-3UTR GCA 90 bp CTGCTTTTCAAGCTCAAGCATGTAGAAGCGGGAAGGCAAGGCTTCCAGCTCCCCAGCATGGCCTCCACGTaGCCCTTGAGGGGCTTCAAG +
Preference number: 4 (lower is better)
Translates to: LLFKLKHVEAGRQGFQLPSMAST*PLRGFK
Trigger: CTTGAAGCCCCTCAAGGGGCACGTGGAGGCCATGCT...GGGGAGCTGGAAGCCTTGCCTTCCCGCTTCTACATGCTTGAGCTTGAAAAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000255006.12
ENST00000440354.2
ENST00000648440.1
CDS-3UTR GCA 90 bp GTCCCCGAGGAGGTGACTGCTTTTCAAGCTCAAGCATGTAGAAGCGGGAAGGCAAGCATGGCCTCCACGTaGCCCTTGAGGGGCTTCAAG +
Preference number: 4 (lower is better)
Translates to: VPEEVTAFQAQACRSGKASMAST*PLRGFK
Trigger: CTTGAAGCCCCTCAAGGGGCACGTGGAGGCCATGCT...TGCCTTCCCGCTTCTACATGCTTGAGCTTGAAAAGCAGTCACCTCCTCGGGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000255006.12
ENST00000440354.2
ENST00000648440.1
CDS-3UTR GCA 90 bp AGTTGGCCTGTGGATGGCTTAGTCACTACACTGAGGGGTCCCCGAGGAGGTGACCTCTGCCGCACAAGCTaGAGGTTCTCCTTGAGTTGC +
Preference number: 4 (lower is better)
Translates to: SWPVDGLVTTLRGPRGGDLCRTS*RFSLSC
Trigger: GCAACTCAAGGAGAACCTGCAGCTTGTGCGGCAGAG...GTCACCTCCTCGGGGACCCCTCAGTGTAGTGACTAAGCCATCCACAGGCCAACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255006.12
ENST00000440354.2
ENST00000648440.1
CDS-3UTR GCA 90 bp AGTTGCCCTTGGCCGAGTTGGCCTGTGGATGGCTTAGTCACTACACTGAGGGGTTCCTGCGGATTCCTCTaGCGCACAAGCTGCAGGTTC +
Preference number: 4 (lower is better)
Translates to: SCPWPSWPVDGLVTTLRGSCGFL*RTSCRF
Trigger: GAACCTGCAGCTTGTGCGGCAGAGGAATCCGCAGGA...ACCCCTCAGTGTAGTGACTAAGCCATCCACAGGCCAACTCGGCCAAGGGCAACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255006.12
ENST00000440354.2
ENST00000648440.1
CDS-3UTR CCA 90 bp CTAAAGTTGCCCTTGGCCGAGTTGGCCTGTGGATGGCTTAGTCACTACACTGAGTGCAGCCATATGGGGTaGGTGTGGAGGAGCCGGTCC +
Preference number: 4 (lower is better)
Translates to: LKLPLAELACGWLSHYTECSHMG*VWRSRS
Trigger: GGACCGGCTCCTCCACACCCACCCCATATGGCTGCA...CTCAGTGTAGTGACTAAGCCATCCACAGGCCAACTCGGCCAAGGGCAACTTTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255006.12
ENST00000440354.2
ENST00000648440.1
CDS-3UTR CCA 90 bp TGCCCTTGGCCGAGTTGGCCTGTGGATGGCTTAGTCACTACACTGAGGGGTCCCGGCAAATTCCTTGAGTaGGGCCCCAAATTCACAGGG +
Preference number: 4 (lower is better)
Translates to: CPWPSWPVDGLVTTLRGPGKFLE*GPKFTG
Trigger: CCCTGTGAATTTGGGGCCCCACTCAAGGAATTTGCC...GGGACCCCTCAGTGTAGTGACTAAGCCATCCACAGGCCAACTCGGCCAAGGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255006.12
ENST00000440354.2
ENST00000648440.1
CDS-3UTR CCA 90 bp AGTTGCCCTTGGCCGAGTTGGCCTGTGGATGGCTTAGTCACTACACTGAGGGGTGAGGAAAGAGGCCTATaGGGAGGTGGAAGGTTCGGG +
Preference number: 4 (lower is better)
Translates to: SCPWPSWPVDGLVTTLRGEERGL*GGGRFG
Trigger: CCCGAACCTTCCACCTCCCCATAGGCCTCTTTCCTC...ACCCCTCAGTGTAGTGACTAAGCCATCCACAGGCCAACTCGGCCAAGGGCAACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
CDS-3UTR CCA 90 bp CTAAAGTTGCCCTTGGCCGAGTTGGCCTGTGGATGGCTTAGTCACTACACTGAGAGCACAGGGCCCCGTTaGTCTGGCTGCACTCCAGCT +
Preference number: 4 (lower is better)
Translates to: LKLPLAELACGWLSHYTESTGPR*SGCTPA
Trigger: AGCTGGAGTGCAGCCAGACCAACGGGGCCCTGTGCT...CTCAGTGTAGTGACTAAGCCATCCACAGGCCAACTCGGCCAAGGGCAACTTTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
CDS-3UTR CCA 90 bp CAAGCATGTAGAAGCGGGAAGGCAAGGCTTCCAGCTCCCCTTTGGATGCACCACTCTGGCATGCTCGTCTaGGTTTCAGTCCTGGCCAGC +
Preference number: 4 (lower is better)
Translates to: QACRSGKARLPAPLWMHHSGMLV*VSVLAS
Trigger: GCTGGCCAGGACTGAAACCCAGACGAGCATGCCAGA...GTGGTGCATCCAAAGGGGAGCTGGAAGCCTTGCCTTCCCGCTTCTACATGCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
CDS-3UTR CCA 90 bp CTGCTTTTCAAGCTCAAGCATGTAGAAGCGGGAAGGCAAGGCTTCCAGCTCCCCCCTCCAGGCTGCTGTTaGTGTCCGCCTCGTAGCCAA +
Preference number: 4 (lower is better)
Translates to: LLFKLKHVEAGRQGFQLPPPGCC*CPPRSQ
Trigger: TTGGCTACGAGGCGGACACCAACAGCAGCCTGGAGG...GGGGAGCTGGAAGCCTTGCCTTCCCGCTTCTACATGCTTGAGCTTGAAAAGCAG
58% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
CDS-3UTR CCA 90 bp AGTTGGCCTGTGGATGGCTTAGTCACTACACTGAGGGGTCCCCGAGGAGGTGACGGATGGTCCGGTTGGTaGTTCTCCGTTTGTGCCACT +
Preference number: 4 (lower is better)
Translates to: SWPVDGLVTTLRGPRGGDGWSGW*FSVCAT
Trigger: AGTGGCACAAACGGAGAACCACCAACCGGACCATCC...GTCACCTCCTCGGGGACCCCTCAGTGTAGTGACTAAGCCATCCACAGGCCAACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255006.12
ENST00000440354.2
ENST00000648440.1
CDS-3UTR CCA 90 bp CAAGCATGTAGAAGCGGGAAGGCAAGGCTTCCAGCTCCCCTTTGGATGCACCACAGGGGATGGTCCGGTTaGTGGTTCTCCGTTTGTGCC +
Preference number: 4 (lower is better)
Translates to: QACRSGKARLPAPLWMHHRGWSG*WFSVCA
Trigger: GGCACAAACGGAGAACCACCAACCGGACCATCCCCT...GTGGTGCATCCAAAGGGGAGCTGGAAGCCTTGCCTTCCCGCTTCTACATGCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255006.12
ENST00000440354.2
ENST00000648440.1
CDS-3UTR CCA 90 bp AGTTGGCCTGTGGATGGCTTAGTCACTACACTGAGGGGTCCCCGAGGAGGTGACCTTTGGATGCACCACTaGGAAGTCCCGCCTGTCTTC +
Preference number: 4 (lower is better)
Translates to: SWPVDGLVTTLRGPRGGDLWMHH*EVPPVF
Trigger: GAAGACAGGCGGGACTTCCCAGTGGTGCATCCAAAG...GTCACCTCCTCGGGGACCCCTCAGTGTAGTGACTAAGCCATCCACAGGCCAACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255006.12
ENST00000440354.2
ENST00000648440.1
CDS-3UTR CCA 90 bp AGCTACCTTGCGTGGCTAAAGTTGCCCTTGGCCGAGTTGGCCTGTGGATGGCTTTGCCCTTGGCCGAGTTaGCCTGTGGATGGCTTAGTC +
Preference number: 4 (lower is better)
Translates to: SYLAWLKLPLAELACGWLCPWPS*PVDGLV
Trigger: GACTAAGCCATCCACAGGCCAACTCGGCCAAGGGCA...AAGCCATCCACAGGCCAACTCGGCCAAGGGCAACTTTAGCCACGCAAGGTAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255006.12
ENST00000440354.2
ENST00000648440.1
CDS-3UTR TCA 90 bp AGTTGCCCTTGGCCGAGTTGGCCTGTGGATGGCTTAGTCACTACACTGAGGGGTGCTGCACTCCAGCTCTaGAGGCGTCCTGGTTTTGAT +
Preference number: 4 (lower is better)
Translates to: SCPWPSWPVDGLVTTLRGAALQL*RRPGFD
Trigger: ATCAAAACCAGGACGCCTTCAGAGCTGGAGTGCAGC...ACCCCTCAGTGTAGTGACTAAGCCATCCACAGGCCAACTCGGCCAAGGGCAACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
CDS-3UTR TCA 90 bp CAAGCATGTAGAAGCGGGAAGGCAAGGCTTCCAGCTCCCCTTTGGATGCACCACAGCCATCCACAGGAGTaGGAATCACCTGACGCACTG +
Preference number: 4 (lower is better)
Translates to: QACRSGKARLPAPLWMHHSHPQE*ESPDAL
Trigger: CAGTGCGTCAGGTGATTCTCACTCCTGTGGATGGCT...GTGGTGCATCCAAAGGGGAGCTGGAAGCCTTGCCTTCCCGCTTCTACATGCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255006.12
ENST00000440354.2
ENST00000648440.1
CDS-3UTR GCA 90 bp GTCCCCGAGGAGGTGACTGCTTTTCAAGCTCAAGCATGTAGAAGCGGGAAGGCACTTCTCCTCTCCCACTaGAGTTCAGCCCAACCTCCC +
Preference number: 4 (lower is better)
Translates to: VPEEVTAFQAQACRSGKALLLSH*SSAQPP
Trigger: GGGAGGTTGGGCTGAACTGCAGTGGGAGAGGAGAAG...TGCCTTCCCGCTTCTACATGCTTGAGCTTGAAAAGCAGTCACCTCCTCGGGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255006.12
CDS-3UTR GCA 90 bp GTCCCCGAGGAGGTGACTGCTTTTCAAGCTCAAGCATGTAGAAGCGGGAAGGCACTGCAGGACCTCTGCTaGCTCCTCCTCACTCAGACT +
Preference number: 4 (lower is better)
Translates to: VPEEVTAFQAQACRSGKALQDLC*LLLTQT
Trigger: AGTCTGAGTGAGGAGGAGGCAGCAGAGGTCCTGCAG...TGCCTTCCCGCTTCTACATGCTTGAGCTTGAAAAGCAGTCACCTCCTCGGGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255006.12
ENST00000440354.2
ENST00000648440.1
CDS-3UTR GCA 90 bp CAAGCATGTAGAAGCGGGAAGGCAAGGCTTCCAGCTCCCCTTTGGATGCACCACCTCTGCCGCACAAGCTaGAGGTTCTCCTTGAGTTGC +
Preference number: 4 (lower is better)
Translates to: QACRSGKARLPAPLWMHHLCRTS*RFSLSC
Trigger: GCAACTCAAGGAGAACCTGCAGCTTGTGCGGCAGAG...GTGGTGCATCCAAAGGGGAGCTGGAAGCCTTGCCTTCCCGCTTCTACATGCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255006.12
ENST00000440354.2
ENST00000648440.1
CDS-3UTR GCA 90 bp AGCTACCTTGCGTGGCTAAAGTTGCCCTTGGCCGAGTTGGCCTGTGGATGGCTTGTGGTTCTCCGTTTGTaGCACTGCCTCAGGGTGTCT +
Preference number: 4 (lower is better)
Translates to: SYLAWLKLPLAELACGWLVVLRL*HCLRVS
Trigger: AGACACCCTGAGGCAGTGGCACAAACGGAGAACCAC...AAGCCATCCACAGGCCAACTCGGCCAAGGGCAACTTTAGCCACGCAAGGTAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255006.12
ENST00000440354.2
ENST00000648440.1
CDS-3UTR GCA 90 bp CAAGCATGTAGAAGCGGGAAGGCAAGGCTTCCAGCTCCCCTTTGGATGCACCACGTGGTTCTCCGTTTGTaGCACTGCCTCAGGGTGTCT +
Preference number: 4 (lower is better)
Translates to: QACRSGKARLPAPLWMHHVVLRL*HCLRVS
Trigger: AGACACCCTGAGGCAGTGGCACAAACGGAGAACCAC...GTGGTGCATCCAAAGGGGAGCTGGAAGCCTTGCCTTCCCGCTTCTACATGCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255006.12
ENST00000440354.2
ENST00000648440.1
CDS-3UTR GCA 90 bp CAAGCATGTAGAAGCGGGAAGGCAAGGCTTCCAGCTCCCCTTTGGATGCACCACTCCTCTGCCAGCTGCTaGCATGTCTCGTCAACGAAG +
Preference number: 4 (lower is better)
Translates to: QACRSGKARLPAPLWMHHSSASC*HVSSTK
Trigger: CTTCGTTGACGAGACATGGCAGCAGCTGGCAGAGGA...GTGGTGCATCCAAAGGGGAGCTGGAAGCCTTGCCTTCCCGCTTCTACATGCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255006.12
ENST00000440354.2
ENST00000648440.1
CDS-3UTR GCA 90 bp GTCCCCGAGGAGGTGACTGCTTTTCAAGCTCAAGCATGTAGAAGCGGGAAGGCAGTGTCCTCTGCCAGCTaGTGCCATGTCTCGTCAACG +
Preference number: 4 (lower is better)
Translates to: VPEEVTAFQAQACRSGKAVSSAS*CHVSST
Trigger: CGTTGACGAGACATGGCAGCAGCTGGCAGAGGACAC...TGCCTTCCCGCTTCTACATGCTTGAGCTTGAAAAGCAGTCACCTCCTCGGGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255006.12
ENST00000440354.2
ENST00000648440.1
CDS-3UTR GCA 90 bp AGTTGGCCTGTGGATGGCTTAGTCACTACACTGAGGGGTCCCCGAGGAGGTGACCCCCGAGGAGGTGACTaGTTTTCAAGCTCAAGCATG +
Preference number: 4 (lower is better)
Translates to: SWPVDGLVTTLRGPRGGDPRGGD*FSSSSM
Trigger: CATGCTTGAGCTTGAAAAGCAGTCACCTCCTCGGGG...GTCACCTCCTCGGGGACCCCTCAGTGTAGTGACTAAGCCATCCACAGGCCAACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000255006.12
ENST00000440354.2
ENST00000648440.1
CDS-3UTR CCA 90 bp TGCCCTTGGCCGAGTTGGCCTGTGGATGGCTTAGTCACTACACTGAGGGGTCCCCCTCCACTGAGGTCCTaGCTGTGCACTTTCAAGAAA +
Preference number: 4 (lower is better)
Translates to: CPWPSWPVDGLVTTLRGPPPLRS*LCTFKK
Trigger: TTTCTTGAAAGTGCACAGCCAGGACCTCAGTGGAGG...GGGACCCCTCAGTGTAGTGACTAAGCCATCCACAGGCCAACTCGGCCAAGGGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
CDS-3UTR CCA 90 bp CATCTTTTGAAGAGCCTGAACCAGCAGACTGCACTCCTCAGTCCTTTGTTAGAGGCCGTGATTCAGAGCTaGGCGGCGGGGCCCTTGTGC +
Preference number: 4 (lower is better)
Translates to: HLLKSLNQQTALLSPLLEAVIQS*AAGPLC
Trigger: GCACAAGGGCCCCGCCGCCCAGCTCTGAATCACGGC...CTCTAACAAAGGACTGAGGAGTGCAGTCTGCTGGTTCAGGCTCTTCAAAAGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
CDS-3UTR CCA 90 bp CTGCTTTTCAAGCTCAAGCATGTAGAAGCGGGAAGGCAAGGCTTCCAGCTCCCCAGGGGATGGTCCGGTTaGTGGTTCTCCGTTTGTGCC +
Preference number: 4 (lower is better)
Translates to: LLFKLKHVEAGRQGFQLPRGWSG*WFSVCA
Trigger: GGCACAAACGGAGAACCACCAACCGGACCATCCCCT...GGGGAGCTGGAAGCCTTGCCTTCCCGCTTCTACATGCTTGAGCTTGAAAAGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000255006.12
ENST00000440354.2
ENST00000648440.1
CDS-3UTR CCA 90 bp CAAGCATGTAGAAGCGGGAAGGCAAGGCTTCCAGCTCCCCTTTGGATGCACCACCTCAGCTACCTTGCGTaGCTAAAGTTGCCCTTGGCC +
Preference number: 4 (lower is better)
Translates to: QACRSGKARLPAPLWMHHLSYLA*LKLPLA
Trigger: GGCCAAGGGCAACTTTAGCCACGCAAGGTAGCTGAG...GTGGTGCATCCAAAGGGGAGCTGGAAGCCTTGCCTTCCCGCTTCTACATGCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255006.12
ENST00000440354.2
ENST00000648440.1
CDS-3UTR CCA 90 bp AGCTACCTTGCGTGGCTAAAGTTGCCCTTGGCCGAGTTGGCCTGTGGATGGCTTCTCAGCTACCTTGCGTaGCTAAAGTTGCCCTTGGCC +
Preference number: 4 (lower is better)
Translates to: SYLAWLKLPLAELACGWLLSYLA*LKLPLA
Trigger: GGCCAAGGGCAACTTTAGCCACGCAAGGTAGCTGAG...AAGCCATCCACAGGCCAACTCGGCCAAGGGCAACTTTAGCCACGCAAGGTAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255006.12
ENST00000440354.2
ENST00000648440.1
3UTR CAA 72 bp AGCTACCTTGCGTGGCTAAAGTTGCCCTTGGCCGAGTaGGCCTGTGGATGGCTTAGTCACTACACTGAGGGG +
Preference number: 4 (lower is better)
Translates to: SYLAWLKLPLAE*ACGWLSHYTEG
Trigger: CCCCTCAGTGTAGTGACTAAGCCATCCACAGGCCAACTCGGCCAAGGGCAACTTTAGCCACGCAAGGTAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255006.12
ENST00000440354.2
ENST00000648440.1
CDS-3UTR TCA 90 bp AGCTACCTTGCGTGGCTAAAGTTGCCCTTGGCCGAGTTGGCCTGTGGATGGCTTGGCCATTTTCCAGGTTaGCATCTGTCCGCACCATCT +
Preference number: 4 (lower is better)
Translates to: SYLAWLKLPLAELACGWLGHFPG*HLSAPS
Trigger: AGATGGTGCGGACAGATGTCAACCTGGAAAATGGCC...AAGCCATCCACAGGCCAACTCGGCCAAGGGCAACTTTAGCCACGCAAGGTAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255006.12
ENST00000440354.2
ENST00000648440.1
CDS-3UTR TCA 90 bp CAAGCATGTAGAAGCGGGAAGGCAAGGCTTCCAGCTCCCCTTTGGATGCACCACTGTCACACTGGGCTATaGCATAGGTCAGGACTGGCA +
Preference number: 4 (lower is better)
Translates to: QACRSGKARLPAPLWMHHCHTGL*HRSGLA
Trigger: TGCCAGTCCTGACCTATGTCATAGCCCAGTGTGACA...GTGGTGCATCCAAAGGGGAGCTGGAAGCCTTGCCTTCCCGCTTCTACATGCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255006.12
ENST00000440354.2
ENST00000648440.1
CDS-3UTR TCA 90 bp AGCTACCTTGCGTGGCTAAAGTTGCCCTTGGCCGAGTTGGCCTGTGGATGGCTTTGTCACACTGGGCTATaGCATAGGTCAGGACTGGCA +
Preference number: 4 (lower is better)
Translates to: SYLAWLKLPLAELACGWLCHTGL*HRSGLA
Trigger: TGCCAGTCCTGACCTATGTCATAGCCCAGTGTGACA...AAGCCATCCACAGGCCAACTCGGCCAAGGGCAACTTTAGCCACGCAAGGTAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255006.12
ENST00000440354.2
ENST00000648440.1
CDS-3UTR TCA 90 bp AGCTACCTTGCGTGGCTAAAGTTGCCCTTGGCCGAGTTGGCCTGTGGATGGCTTTTCTCAGCGCAGATCTaGCACACATCCTCAGTGGTG +
Preference number: 4 (lower is better)
Translates to: SYLAWLKLPLAELACGWLFSAQI*HTSSVV
Trigger: CACCACTGAGGATGTGTGTCAGATCTGCGCTGAGAA...AAGCCATCCACAGGCCAACTCGGCCAAGGGCAACTTTAGCCACGCAAGGTAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255006.12
ENST00000440354.2
ENST00000648440.1
CDS-3UTR TCA 90 bp AGTTGCCCTTGGCCGAGTTGGCCTGTGGATGGCTTAGTCACTACACTGAGGGGTTTCTCAGCGCAGATCTaGCACACATCCTCAGTGGTG +
Preference number: 4 (lower is better)
Translates to: SCPWPSWPVDGLVTTLRGFSAQI*HTSSVV
Trigger: CACCACTGAGGATGTGTGTCAGATCTGCGCTGAGAA...ACCCCTCAGTGTAGTGACTAAGCCATCCACAGGCCAACTCGGCCAAGGGCAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255006.12
ENST00000440354.2
ENST00000648440.1
CDS-3UTR TCA 90 bp AGCTACCTTGCGTGGCTAAAGTTGCCCTTGGCCGAGTTGGCCTGTGGATGGCTTTCTTCTAGGAGGTGGTaGGGTCTTCTTCCCCGTTCT +
Preference number: 4 (lower is better)
Translates to: SYLAWLKLPLAELACGWLSSRRW*GLLPRS
Trigger: AGAACGGGGAAGAAGACCTCACCACCTCCTAGAAGA...AAGCCATCCACAGGCCAACTCGGCCAAGGGCAACTTTAGCCACGCAAGGTAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255006.12
ENST00000440354.2
ENST00000648440.1
CDS-3UTR GCA 90 bp GTCCCCGAGGAGGTGACTGCTTTTCAAGCTCAAGCATGTAGAAGCGGGAAGGCATCACTCAGACTCAGCTaGAGCCATATGGGGTGGGTG +
Preference number: 4 (lower is better)
Translates to: VPEEVTAFQAQACRSGKASLRLS*SHMGWV
Trigger: CACCCACCCCATATGGCTGCAGCTGAGTCTGAGTGA...TGCCTTCCCGCTTCTACATGCTTGAGCTTGAAAAGCAGTCACCTCCTCGGGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000255006.12
ENST00000440354.2
ENST00000648440.1
CDS-3UTR GCA 90 bp GTCCCCGAGGAGGTGACTGCTTTTCAAGCTCAAGCATGTAGAAGCGGGAAGGCAACCTGGGTCATGAACTaGCGGATGGTCTGCAGCATG +
Preference number: 4 (lower is better)
Translates to: VPEEVTAFQAQACRSGKATWVMN*RMVCSM
Trigger: CATGCTGCAGACCATCCGGCAGTTCATGACCCAGGT...TGCCTTCCCGCTTCTACATGCTTGAGCTTGAAAAGCAGTCACCTCCTCGGGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
CDS-3UTR GCA 90 bp TGCCCTTGGCCGAGTTGGCCTGTGGATGGCTTAGTCACTACACTGAGGGGTCCCGCTGAGCAGTCGCGCTaGTTGTTCTTCTTGGAAATT +
Preference number: 4 (lower is better)
Translates to: CPWPSWPVDGLVTTLRGPAEQSR*LFFLEI
Trigger: AATTTCCAAGAAGAACAAGCAGCGCGACTGCTCAGC...GGGACCCCTCAGTGTAGTGACTAAGCCATCCACAGGCCAACTCGGCCAAGGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255006.12
ENST00000440354.2
ENST00000648440.1
CDS-3UTR GCA 90 bp GTCCCCGAGGAGGTGACTGCTTTTCAAGCTCAAGCATGTAGAAGCGGGAAGGCACTCCGTTTGTGCCACTaGCTCAGGGTGTCTCTGGTT +
Preference number: 4 (lower is better)
Translates to: VPEEVTAFQAQACRSGKALRLCH*LRVSLV
Trigger: AACCAGAGACACCCTGAGGCAGTGGCACAAACGGAG...TGCCTTCCCGCTTCTACATGCTTGAGCTTGAAAAGCAGTCACCTCCTCGGGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255006.12
ENST00000440354.2
ENST00000648440.1
CDS-3UTR CCA 90 bp CTAAAGTTGCCCTTGGCCGAGTTGGCCTGTGGATGGCTTAGTCACTACACTGAGCATATGGGGTGGGTGTaGAGGAGCCGGTCCAAGATG +
Preference number: 4 (lower is better)
Translates to: LKLPLAELACGWLSHYTEHMGWV*RSRSKM
Trigger: CATCTTGGACCGGCTCCTCCACACCCACCCCATATG...CTCAGTGTAGTGACTAAGCCATCCACAGGCCAACTCGGCCAAGGGCAACTTTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255006.12
ENST00000440354.2
ENST00000648440.1
CDS-3UTR CCA 90 bp CAAGCATGTAGAAGCGGGAAGGCAAGGCTTCCAGCTCCCCTTTGGATGCACCACGGCAAATTCCTTGAGTaGGGCCCCAAATTCACAGGG +
Preference number: 4 (lower is better)
Translates to: QACRSGKARLPAPLWMHHGKFLE*GPKFTG
Trigger: CCCTGTGAATTTGGGGCCCCACTCAAGGAATTTGCC...GTGGTGCATCCAAAGGGGAGCTGGAAGCCTTGCCTTCCCGCTTCTACATGCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255006.12
ENST00000440354.2
ENST00000648440.1
CDS-3UTR CCA 90 bp CTAAAGTTGCCCTTGGCCGAGTTGGCCTGTGGATGGCTTAGTCACTACACTGAGGAGGAAAGAGGCCTATaGGGAGGTGGAAGGTTCGGG +
Preference number: 4 (lower is better)
Translates to: LKLPLAELACGWLSHYTEEERGL*GGGRFG
Trigger: CCCGAACCTTCCACCTCCCCATAGGCCTCTTTCCTC...CTCAGTGTAGTGACTAAGCCATCCACAGGCCAACTCGGCCAAGGGCAACTTTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
CDS-3UTR CCA 90 bp GTCCCCGAGGAGGTGACTGCTTTTCAAGCTCAAGCATGTAGAAGCGGGAAGGCACTTCTTCAGCCGGGGTaGAGGGATGGGAGTTGGTTT +
Preference number: 4 (lower is better)
Translates to: VPEEVTAFQAQACRSGKALLQPG*RDGSWF
Trigger: AAACCAACTCCCATCCCTCCACCCCGGCTGAAGAAG...TGCCTTCCCGCTTCTACATGCTTGAGCTTGAAAAGCAGTCACCTCCTCGGGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
CDS-3UTR CCA 90 bp GCCGAGTTGGCCTGTGGATGGCTTAGTCACTACACTGAGGGGTCCCCGAGGAGGAGATGCACTTGTGCATaGCTTTTTCCAGCACCACAT +
Preference number: 4 (lower is better)
Translates to: AELACGWLSHYTEGSPRRRCTCA*LFPAPH
Trigger: ATGTGGTGCTGGAAAAAGCCATGCACAAGTGCATCT...CCTCCTCGGGGACCCCTCAGTGTAGTGACTAAGCCATCCACAGGCCAACTCGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000255006.12
ENST00000440354.2
ENST00000648440.1
CDS-3UTR CCA 90 bp CTGCTTTTCAAGCTCAAGCATGTAGAAGCGGGAAGGCAAGGCTTCCAGCTCCCCACAAAGTGGAAGATGTaGGGCTGTGGTCGGCTGTGC +
Preference number: 4 (lower is better)
Translates to: LLFKLKHVEAGRQGFQLPTKWKM*GCGRLC
Trigger: GCACAGCCGACCACAGCCCCACATCTTCCACTTTGT...GGGGAGCTGGAAGCCTTGCCTTCCCGCTTCTACATGCTTGAGCTTGAAAAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255006.12
ENST00000440354.2
ENST00000648440.1
CDS-3UTR CCA 90 bp AGTTGGCCTGTGGATGGCTTAGTCACTACACTGAGGGGTCCCCGAGGAGGTGACGACACTGCAAACATTTaGGAGCTGCCAAGCCCTTTC +
Preference number: 4 (lower is better)
Translates to: SWPVDGLVTTLRGPRGGDDTANI*ELPSPF
Trigger: GAAAGGGCTTGGCAGCTCCCAAATGTTTGCAGTGTC...GTCACCTCCTCGGGGACCCCTCAGTGTAGTGACTAAGCCATCCACAGGCCAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648440.1
CDS-3UTR TCA 90 bp CTGCTTTTCAAGCTCAAGCATGTAGAAGCGGGAAGGCAAGGCTTCCAGCTCCCCGCTGCAGGTTCTCCTTaGGTTGCTTCCATGAGCCAT +
Preference number: 4 (lower is better)
Translates to: LLFKLKHVEAGRQGFQLPAAGSP*VASMSH
Trigger: ATGGCTCATGGAAGCAACTCAAGGAGAACCTGCAGC...GGGGAGCTGGAAGCCTTGCCTTCCCGCTTCTACATGCTTGAGCTTGAAAAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255006.12
ENST00000440354.2
ENST00000648440.1
CDS-3UTR TCA 90 bp AGCTACCTTGCGTGGCTAAAGTTGCCCTTGGCCGAGTTGGCCTGTGGATGGCTTCTGTGCAACCACTGTTaGCCTCCTGAAATGCAACTC +
Preference number: 4 (lower is better)
Translates to: SYLAWLKLPLAELACGWLLCNHC*PPEMQL
Trigger: GAGTTGCATTTCAGGAGGTCAACAGTGGTTGCACAG...AAGCCATCCACAGGCCAACTCGGCCAAGGGCAACTTTAGCCACGCAAGGTAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255006.12
ENST00000440354.2
ENST00000648440.1
CDS-3UTR GCA 90 bp CTAAAGTTGCCCTTGGCCGAGTTGGCCTGTGGATGGCTTAGTCACTACACTGAGTCACTCAGACTCAGCTaGAGCCATATGGGGTGGGTG +
Preference number: 4 (lower is better)
Translates to: LKLPLAELACGWLSHYTESLRLS*SHMGWV
Trigger: CACCCACCCCATATGGCTGCAGCTGAGTCTGAGTGA...CTCAGTGTAGTGACTAAGCCATCCACAGGCCAACTCGGCCAAGGGCAACTTTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255006.12
ENST00000440354.2
ENST00000648440.1
CDS-3UTR GCA 90 bp GTCCCCGAGGAGGTGACTGCTTTTCAAGCTCAAGCATGTAGAAGCGGGAAGGCACCCCGAGGAGGTGACTaGTTTTCAAGCTCAAGCATG +
Preference number: 4 (lower is better)
Translates to: VPEEVTAFQAQACRSGKAPRGGD*FSSSSM
Trigger: CATGCTTGAGCTTGAAAAGCAGTCACCTCCTCGGGG...TGCCTTCCCGCTTCTACATGCTTGAGCTTGAAAAGCAGTCACCTCCTCGGGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000255006.12
ENST00000440354.2
ENST00000648440.1
CDS-3UTR GCA 90 bp CAAGCATGTAGAAGCGGGAAGGCAAGGCTTCCAGCTCCCCTTTGGATGCACCACCCTGAACCAGCAGACTaGACTCCTCAGTCCTTTGTT +
Preference number: 4 (lower is better)
Translates to: QACRSGKARLPAPLWMHHPEPAD*TPQSFV
Trigger: AACAAAGGACTGAGGAGTGCAGTCTGCTGGTTCAGG...GTGGTGCATCCAAAGGGGAGCTGGAAGCCTTGCCTTCCCGCTTCTACATGCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
CDS-3UTR GCA 90 bp GCCGAGTTGGCCTGTGGATGGCTTAGTCACTACACTGAGGGGTCCCCGAGGAGGGACCCTCATAGTTTGTaGACCTGCAAACTGGTTTTA +
Preference number: 4 (lower is better)
Translates to: AELACGWLSHYTEGSPRRDPHSL*TCKLVL
Trigger: TAAAACCAGTTTGCAGGTGCACAAACTATGAGGGTC...CCTCCTCGGGGACCCCTCAGTGTAGTGACTAAGCCATCCACAGGCCAACTCGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
CDS-3UTR CCA 90 bp CTGCTTTTCAAGCTCAAGCATGTAGAAGCGGGAAGGCAAGGCTTCCAGCTCCCCTGTCTTACCATGCTGTaGGTTTCAGCGGGTTCCAGG +
Preference number: 4 (lower is better)
Translates to: LLFKLKHVEAGRQGFQLPCLTML*VSAGSR
Trigger: CCTGGAACCCGCTGAAACCCACAGCATGGTAAGACA...GGGGAGCTGGAAGCCTTGCCTTCCCGCTTCTACATGCTTGAGCTTGAAAAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255006.12
ENST00000440354.2
ENST00000648440.1
CDS-3UTR CCA 90 bp CTGCTTTTCAAGCTCAAGCATGTAGAAGCGGGAAGGCAAGGCTTCCAGCTCCCCGACATAGGTCAGGACTaGCAAGAAGTCATCAGCGCC +
Preference number: 4 (lower is better)
Translates to: LLFKLKHVEAGRQGFQLPDIGQD*QEVISA
Trigger: GGCGCTGATGACTTCTTGCCAGTCCTGACCTATGTC...GGGGAGCTGGAAGCCTTGCCTTCCCGCTTCTACATGCTTGAGCTTGAAAAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255006.12
ENST00000440354.2
ENST00000648440.1
CDS-3UTR CCA 90 bp CTAAAGTTGCCCTTGGCCGAGTTGGCCTGTGGATGGCTTAGTCACTACACTGAGCTTTGGATGCACCACTaGGAAGTCCCGCCTGTCTTC +
Preference number: 4 (lower is better)
Translates to: LKLPLAELACGWLSHYTELWMHH*EVPPVF
Trigger: GAAGACAGGCGGGACTTCCCAGTGGTGCATCCAAAG...CTCAGTGTAGTGACTAAGCCATCCACAGGCCAACTCGGCCAAGGGCAACTTTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255006.12
ENST00000440354.2
ENST00000648440.1
CDS-3UTR TCA 90 bp CATCTTTTGAAGAGCCTGAACCAGCAGACTGCACTCCTCAGTCCTTTGTTAGAGGAGGCTGTCATAGCCTaGGTCCCGGGCACAGGTCTT +
Preference number: 4 (lower is better)
Translates to: HLLKSLNQQTALLSPLLEEAVIA*VPGTGL
Trigger: AAGACCTGTGCCCGGGACTCAGGCTATGACAGCCTC...CTCTAACAAAGGACTGAGGAGTGCAGTCTGCTGGTTCAGGCTCTTCAAAAGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
CDS-3UTR TCA 90 bp CATCTTTTGAAGAGCCTGAACCAGCAGACTGCACTCCTCAGTCCTTTGTTAGAGGCCGGTCCAAGATGCTaGGCCTGTTGGAGAGGCTGT +
Preference number: 4 (lower is better)
Translates to: HLLKSLNQQTALLSPLLEAGPRC*ACWRGC
Trigger: ACAGCCTCTCCAACAGGCTCAGCATCTTGGACCGGC...CTCTAACAAAGGACTGAGGAGTGCAGTCTGCTGGTTCAGGCTCTTCAAAAGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
CDS-3UTR TCA 90 bp AGCTACCTTGCGTGGCTAAAGTTGCCCTTGGCCGAGTTGGCCTGTGGATGGCTTCTCCGACTTGGCTGTTaGAATGGCATAAGGCAACTT +
Preference number: 4 (lower is better)
Translates to: SYLAWLKLPLAELACGWLLRLGC*NGIRQL
Trigger: AAGTTGCCTTATGCCATTTCAACAGCCAAGTCGGAG...AAGCCATCCACAGGCCAACTCGGCCAAGGGCAACTTTAGCCACGCAAGGTAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
CDS-3UTR TCA 90 bp ACGTGGATACAAGACCCTCATAGTTTGTGCACCTGCAAACTGGTTTTATTTAACATGGCACGGGGGCCGTaGTTCAGAGCTGGGCGGCGG +
Preference number: 4 (lower is better)
Translates to: TWIQDPHSLCTCKLVLFNMARGP*FRAGRR
Trigger: CCGCCGCCCAGCTCTGAATCACGGCCCCCGTGCCAT...GTTAAATAAAACCAGTTTGCAGGTGCACAAACTATGAGGGTCTTGTATCCACGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
CDS-3UTR TCA 90 bp CTGCTTTTCAAGCTCAAGCATGTAGAAGCGGGAAGGCAAGGCTTCCAGCTCCCCCTTGAGTTGCTTCCATaGGCCATCGGCCATGTGAAA +
Preference number: 4 (lower is better)
Translates to: LLFKLKHVEAGRQGFQLPLELLP*AIGHVK
Trigger: TTTCACATGGCCGATGGCTCATGGAAGCAACTCAAG...GGGGAGCTGGAAGCCTTGCCTTCCCGCTTCTACATGCTTGAGCTTGAAAAGCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000255006.12
ENST00000440354.2
ENST00000648440.1
CDS-3UTR TCA 90 bp GCCGAGTTGGCCTGTGGATGGCTTAGTCACTACACTGAGGGGTCCCCGAGGAGGCATAAGGATCGTTCTTaGTGCGTTTGTAGACAAAGT +
Preference number: 4 (lower is better)
Translates to: AELACGWLSHYTEGSPRRHKDRS*CVCRQS
Trigger: ACTTTGTCTACAAACGCATCAAGAACGATCCTTATG...CCTCCTCGGGGACCCCTCAGTGTAGTGACTAAGCCATCCACAGGCCAACTCGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255006.12
ENST00000440354.2
ENST00000648440.1
CDS-3UTR TCA 90 bp AGTTGCCCTTGGCCGAGTTGGCCTGTGGATGGCTTAGTCACTACACTGAGGGGTCCCCGTTCTGGAAAATaGTGCCATAAGGATCGTTCT +
Preference number: 4 (lower is better)
Translates to: SCPWPSWPVDGLVTTLRGPRSGK*CHKDRS
Trigger: AGAACGATCCTTATGGCATCATTTTCCAGAACGGGG...ACCCCTCAGTGTAGTGACTAAGCCATCCACAGGCCAACTCGGCCAAGGGCAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000255006.12
ENST00000440354.2
ENST00000648440.1
CDS-3UTR TCA 90 bp CTAAAGTTGCCCTTGGCCGAGTTGGCCTGTGGATGGCTTAGTCACTACACTGAGAGCCAACCTAGAACCTaGCTGGGGGTAGGTAGCAAA +
Preference number: 4 (lower is better)
Translates to: LKLPLAELACGWLSHYTESQPRT*LGVGSK
Trigger: TTTGCTACCTACCCCCAGTCAGGTTCTAGGTTGGCT...CTCAGTGTAGTGACTAAGCCATCCACAGGCCAACTCGGCCAAGGGCAACTTTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000255006.12
ENST00000440354.2
ENST00000648440.1
CDS-3UTR GCA 90 bp ATGCAATTCTCCATTGCCAAAAGAGAATCCTACTGTTTCACAAACCTCAGCTACCCCGGAGGCTGGGCCTaGAGGACCTCTGCTGCCTCC +
Preference number: 4 (lower is better)
Translates to: MQFSIAKRESYCFTNLSYPGGWA*RTSAAS
Trigger: GGAGGCAGCAGAGGTCCTGCAGGCCCAGCCTCCGGG...GTAGCTGAGGTTTGTGAAACAGTAGGATTCTCTTTTGGCAATGGAGAATTGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255006.12
ENST00000440354.2
ENST00000648440.1
CDS-3UTR GCA 90 bp ACGTGGATACAAGACCCTCATAGTTTGTGCACCTGCAAACTGGTTTTATTTAACCTGGGCTGCCAGCTGTaGCCAGCTCCAGCTCCGGGC +
Preference number: 4 (lower is better)
Translates to: TWIQDPHSLCTCKLVLFNLGCQL*PAPAPG
Trigger: GCCCGGAGCTGGAGCTGGGCACAGCTGGCAGCCCAG...GTTAAATAAAACCAGTTTGCAGGTGCACAAACTATGAGGGTCTTGTATCCACGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
CDS-3UTR GCA 90 bp ATGCAATTCTCCATTGCCAAAAGAGAATCCTACTGTTTCACAAACCTCAGCTACCTGGGCTGCCAGCTGTaGCCAGCTCCAGCTCCGGGC +
Preference number: 4 (lower is better)
Translates to: MQFSIAKRESYCFTNLSYLGCQL*PAPAPG
Trigger: GCCCGGAGCTGGAGCTGGGCACAGCTGGCAGCCCAG...GTAGCTGAGGTTTGTGAAACAGTAGGATTCTCTTTTGGCAATGGAGAATTGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
CDS-3UTR GCA 90 bp AGTTGCCCTTGGCCGAGTTGGCCTGTGGATGGCTTAGTCACTACACTGAGGGGTGCAGCACGAAGGAGCTaGTCCTTTTCTTTTTGGACT +
Preference number: 4 (lower is better)
Translates to: SCPWPSWPVDGLVTTLRGAARRS*SFSFWT
Trigger: AGTCCAAAAAGAAAAGGAGCAGCTCCTTCGTGCTGC...ACCCCTCAGTGTAGTGACTAAGCCATCCACAGGCCAACTCGGCCAAGGGCAACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
CDS-3UTR GCA 90 bp CTAAAGTTGCCCTTGGCCGAGTTGGCCTGTGGATGGCTTAGTCACTACACTGAGAGGTTCTCCTTGAGTTaGTTCCATGAGCCATCGGCC +
Preference number: 4 (lower is better)
Translates to: LKLPLAELACGWLSHYTERFSLS*FHEPSA
Trigger: GGCCGATGGCTCATGGAAGCAACTCAAGGAGAACCT...CTCAGTGTAGTGACTAAGCCATCCACAGGCCAACTCGGCCAAGGGCAACTTTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255006.12
ENST00000440354.2
ENST00000648440.1
CDS-3UTR GCA 90 bp AGTTGGCCTGTGGATGGCTTAGTCACTACACTGAGGGGTCCCCGAGGAGGTGACGTTGACCTCCTGAAATaGAACTCGGAGGTAATTCTG +
Preference number: 4 (lower is better)
Translates to: SWPVDGLVTTLRGPRGGDVDLLK*NSEVIL
Trigger: CAGAATTACCTCCGAGTTGCATTTCAGGAGGTCAAC...GTCACCTCCTCGGGGACCCCTCAGTGTAGTGACTAAGCCATCCACAGGCCAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255006.12
ENST00000440354.2
ENST00000648440.1
CDS-3UTR GCA 90 bp CATCTTTTGAAGAGCCTGAACCAGCAGACTGCACTCCTCAGTCCTTTGTTAGAGCAGCTCCCCTTTGGATaGACCACTGGGAAGTCCCGC +
Preference number: 4 (lower is better)
Translates to: HLLKSLNQQTALLSPLLEQLPFG*TTGKSR
Trigger: GCGGGACTTCCCAGTGGTGCATCCAAAGGGGAGCTG...CTCTAACAAAGGACTGAGGAGTGCAGTCTGCTGGTTCAGGCTCTTCAAAAGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
CDS-3UTR GCA 90 bp CAAGCATGTAGAAGCGGGAAGGCAAGGCTTCCAGCTCCCCTTTGGATGCACCACAAACCTCAGCTACCTTaGGTGGCTAAAGTTGCCCTT +
Preference number: 4 (lower is better)
Translates to: QACRSGKARLPAPLWMHHKPQLP*VAKVAL
Trigger: AAGGGCAACTTTAGCCACGCAAGGTAGCTGAGGTTT...GTGGTGCATCCAAAGGGGAGCTGGAAGCCTTGCCTTCCCGCTTCTACATGCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255006.12
ENST00000440354.2
ENST00000648440.1
CDS-3UTR GCA 90 bp AGTTGGCCTGTGGATGGCTTAGTCACTACACTGAGGGGTCCCCGAGGAGGTGACCTCTCCCCACAAAGTTaGCAAAACATCCAGTTACAG +
Preference number: 4 (lower is better)
Translates to: SWPVDGLVTTLRGPRGGDLSPQS*QNIQLQ
Trigger: CTGTAACTGGATGTTTTGGCAACTTTGTGGGGAGAG...GTCACCTCCTCGGGGACCCCTCAGTGTAGTGACTAAGCCATCCACAGGCCAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
CDS-3UTR CCA 90 bp CCAGCAGACTGCACTCCTCAGTCCTTTGTTAGAGTTCATATTTCTCTCTCTACCAAGATCCCCGGAGGCTaGGCCTGCAGGACCTCTGCT +
Preference number: 4 (lower is better)
Translates to: PADCTPQSFVRVHISLSTKIPGG*ACRTSA
Trigger: AGCAGAGGTCCTGCAGGCCCAGCCTCCGGGGATCTT...GGTAGAGAGAGAAATATGAACTCTAACAAAGGACTGAGGAGTGCAGTCTGCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
CDS-3UTR CCA 90 bp CATCTTTTGAAGAGCCTGAACCAGCAGACTGCACTCCTCAGTCCTTTGTTAGAGGCCGGGGTGGAGGGATaGGAGTTGGTTTCGTTCCAG +
Preference number: 4 (lower is better)
Translates to: HLLKSLNQQTALLSPLLEAGVEG*ELVSFQ
Trigger: CTGGAACGAAACCAACTCCCATCCCTCCACCCCGGC...CTCTAACAAAGGACTGAGGAGTGCAGTCTGCTGGTTCAGGCTCTTCAAAAGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
CDS-3UTR TCA 90 bp CCAGCAGACTGCACTCCTCAGTCCTTTGTTAGAGTTCATATTTCTCTCTCTACCGAGGCTGTCATAGCCTaGGTCCCGGGCACAGGTCTT +
Preference number: 4 (lower is better)
Translates to: PADCTPQSFVRVHISLSTEAVIA*VPGTGL
Trigger: AAGACCTGTGCCCGGGACTCAGGCTATGACAGCCTC...GGTAGAGAGAGAAATATGAACTCTAACAAAGGACTGAGGAGTGCAGTCTGCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
CDS-3UTR TCA 90 bp AGCTACCTTGCGTGGCTAAAGTTGCCCTTGGCCGAGTTGGCCTGTGGATGGCTTTGCAGTAGAAAGCAATaGGCCGGAATAAATCTGCGA +
Preference number: 4 (lower is better)
Translates to: SYLAWLKLPLAELACGWLCSRKQ*AGINLR
Trigger: TCGCAGATTTATTCCGGCTCATTGCTTTCTACTGCA...AAGCCATCCACAGGCCAACTCGGCCAAGGGCAACTTTAGCCACGCAAGGTAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
CDS-3UTR TCA 90 bp AGTTGCCCTTGGCCGAGTTGGCCTGTGGATGGCTTAGTCACTACACTGAGGGGTCATGTTTGTTATGGTTaGCTGTTTCTGGCATGCTCG +
Preference number: 4 (lower is better)
Translates to: SCPWPSWPVDGLVTTLRGHVCYG*LFLACS
Trigger: CGAGCATGCCAGAAACAGTCAACCATAACAAACATG...ACCCCTCAGTGTAGTGACTAAGCCATCCACAGGCCAACTCGGCCAAGGGCAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
CDS-3UTR TCA 90 bp CTAAAGTTGCCCTTGGCCGAGTTGGCCTGTGGATGGCTTAGTCACTACACTGAGCTGTGCAACCACTGTTaGCCTCCTGAAATGCAACTC +
Preference number: 4 (lower is better)
Translates to: LKLPLAELACGWLSHYTELCNHC*PPEMQL
Trigger: GAGTTGCATTTCAGGAGGTCAACAGTGGTTGCACAG...CTCAGTGTAGTGACTAAGCCATCCACAGGCCAACTCGGCCAAGGGCAACTTTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255006.12
ENST00000440354.2
ENST00000648440.1
CDS-3UTR TCA 90 bp CTGCTTTTCAAGCTCAAGCATGTAGAAGCGGGAAGGCAAGGCTTCCAGCTCCCCACACATCCTCAGTGGTaGTGTAAGGTCTCACAAGGA +
Preference number: 4 (lower is better)
Translates to: LLFKLKHVEAGRQGFQLPTHPQW*CKVSQG
Trigger: TCCTTGTGAGACCTTACATCACCACTGAGGATGTGT...GGGGAGCTGGAAGCCTTGCCTTCCCGCTTCTACATGCTTGAGCTTGAAAAGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255006.12
ENST00000440354.2
ENST00000648440.1
CDS-3UTR TCA 90 bp CTGCTTTTCAAGCTCAAGCATGTAGAAGCGGGAAGGCAAGGCTTCCAGCTCCCCCCCCGTTCTGGAAAATaGTGCCATAAGGATCGTTCT +
Preference number: 4 (lower is better)
Translates to: LLFKLKHVEAGRQGFQLPPRSGK*CHKDRS
Trigger: AGAACGATCCTTATGGCATCATTTTCCAGAACGGGG...GGGGAGCTGGAAGCCTTGCCTTCCCGCTTCTACATGCTTGAGCTTGAAAAGCAG
52% GC, longest homopolymer 8 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000255006.12
ENST00000440354.2
ENST00000648440.1
CDS-3UTR TCA 90 bp GCCGAGTTGGCCTGTGGATGGCTTAGTCACTACACTGAGGGGTCCCCGAGGAGGGCAAGCATCTGCTGTTaGATTCAAAAGAACTTGTAT +
Preference number: 4 (lower is better)
Translates to: AELACGWLSHYTEGSPRRASICC*IQKNLY
Trigger: ATACAAGTTCTTTTGAATTCAACAGCAGATGCTTGC...CCTCCTCGGGGACCCCTCAGTGTAGTGACTAAGCCATCCACAGGCCAACTCGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000255006.12
ENST00000440354.2
ENST00000648440.1
CDS-3UTR GCA 90 bp CATCTTTTGAAGAGCCTGAACCAGCAGACTGCACTCCTCAGTCCTTTGTTAGAGTCTGCAGCATGTCGGTaGTGGACACGTGGCACTCCT +
Preference number: 4 (lower is better)
Translates to: HLLKSLNQQTALLSPLLESAACR*WTRGTP
Trigger: AGGAGTGCCACGTGTCCAGCACCGACATGCTGCAGA...CTCTAACAAAGGACTGAGGAGTGCAGTCTGCTGGTTCAGGCTCTTCAAAAGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
CDS-3UTR GCA 90 bp CAAGCATGTAGAAGCGGGAAGGCAAGGCTTCCAGCTCCCCTTTGGATGCACCACTTCAAGATGCACTTGTaGATGGCTTTTTCCAGCACC +
Preference number: 4 (lower is better)
Translates to: QACRSGKARLPAPLWMHHFKMHL*MAFSST
Trigger: GGTGCTGGAAAAAGCCATGCACAAGTGCATCTTGAA...GTGGTGCATCCAAAGGGGAGCTGGAAGCCTTGCCTTCCCGCTTCTACATGCTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000255006.12
ENST00000440354.2
ENST00000648440.1
CDS-3UTR GCA 90 bp CTAAAGTTGCCCTTGGCCGAGTTGGCCTGTGGATGGCTTAGTCACTACACTGAGAATCACCTGACGCACTaGATCGCAAGCATCTGCTGT +
Preference number: 4 (lower is better)
Translates to: LKLPLAELACGWLSHYTENHLTH*IASICC
Trigger: ACAGCAGATGCTTGCGATGCAGTGCGTCAGGTGATT...CTCAGTGTAGTGACTAAGCCATCCACAGGCCAACTCGGCCAAGGGCAACTTTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255006.12
ENST00000440354.2
ENST00000648440.1
CDS-3UTR CCA 90 bp CTAAAGTTGCCCTTGGCCGAGTTGGCCTGTGGATGGCTTAGTCACTACACTGAGGCTGAGCCTCCGACTTaGCTGTTGAAATGGCATAAG +
Preference number: 4 (lower is better)
Translates to: LKLPLAELACGWLSHYTEAEPPT*LLKWHK
Trigger: CTTATGCCATTTCAACAGCCAAGTCGGAGGCTCAGC...CTCAGTGTAGTGACTAAGCCATCCACAGGCCAACTCGGCCAAGGGCAACTTTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
CDS-3UTR CCA 90 bp CCAGCAGACTGCACTCCTCAGTCCTTTGTTAGAGTTCATATTTCTCTCTCTACCGCCGGGGTGGAGGGATaGGAGTTGGTTTCGTTCCAG +
Preference number: 4 (lower is better)
Translates to: PADCTPQSFVRVHISLSTAGVEG*ELVSFQ
Trigger: CTGGAACGAAACCAACTCCCATCCCTCCACCCCGGC...GGTAGAGAGAGAAATATGAACTCTAACAAAGGACTGAGGAGTGCAGTCTGCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
CDS-3UTR CCA 90 bp AGCTACCTTGCGTGGCTAAAGTTGCCCTTGGCCGAGTTGGCCTGTGGATGGCTTCAGACTTGTACCGGTTaGAAGCTTGTTCTTTTCCTG +
Preference number: 4 (lower is better)
Translates to: SYLAWLKLPLAELACGWLQTCTG*KLVLFL
Trigger: CAGGAAAAGAACAAGCTTCCAACCGGTACAAGTCTG...AAGCCATCCACAGGCCAACTCGGCCAAGGGCAACTTTAGCCACGCAAGGTAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648440.1
CDS-3UTR TCA 90 bp GTCCCCGAGGAGGTGACTGCTTTTCAAGCTCAAGCATGTAGAAGCGGGAAGGCAATCTTGGTAGATTTATaGACCAGGAAGATCCCCGGA +
Preference number: 4 (lower is better)
Translates to: VPEEVTAFQAQACRSGKAILVDL*TRKIPG
Trigger: TCCGGGGATCTTCCTGGTTCATAAATCTACCAAGAT...TGCCTTCCCGCTTCTACATGCTTGAGCTTGAAAAGCAGTCACCTCCTCGGGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000255006.12
ENST00000440354.2
ENST00000648440.1
CDS-3UTR TCA 90 bp CTGCTTTTCAAGCTCAAGCATGTAGAAGCGGGAAGGCAAGGCTTCCAGCTCCCCATCTTGGTAGATTTATaGACCAGGAAGATCCCCGGA +
Preference number: 4 (lower is better)
Translates to: LLFKLKHVEAGRQGFQLPILVDL*TRKIPG
Trigger: TCCGGGGATCTTCCTGGTTCATAAATCTACCAAGAT...GGGGAGCTGGAAGCCTTGCCTTCCCGCTTCTACATGCTTGAGCTTGAAAAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000255006.12
ENST00000440354.2
ENST00000648440.1
CDS-3UTR TCA 90 bp CAAGCATGTAGAAGCGGGAAGGCAAGGCTTCCAGCTCCCCTTTGGATGCACCACGCCAACCAAATGAGATaGCTATGCATCTTTACACAG +
Preference number: 4 (lower is better)
Translates to: QACRSGKARLPAPLWMHHANQMR*LCIFTQ
Trigger: CTGTGTAAAGATGCATAGTCATCTCATTTGGTTGGC...GTGGTGCATCCAAAGGGGAGCTGGAAGCCTTGCCTTCCCGCTTCTACATGCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
CDS-3UTR TCA 90 bp AGCTACCTTGCGTGGCTAAAGTTGCCCTTGGCCGAGTTGGCCTGTGGATGGCTTGCCAACCAAATGAGATaGCTATGCATCTTTACACAG +
Preference number: 4 (lower is better)
Translates to: SYLAWLKLPLAELACGWLANQMR*LCIFTQ
Trigger: CTGTGTAAAGATGCATAGTCATCTCATTTGGTTGGC...AAGCCATCCACAGGCCAACTCGGCCAAGGGCAACTTTAGCCACGCAAGGTAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
CDS-3UTR TCA 90 bp CTGCTTTTCAAGCTCAAGCATGTAGAAGCGGGAAGGCAAGGCTTCCAGCTCCCCTTTTCCTGGCTTCCCTaGAGGGTAAAGTGGATTCTT +
Preference number: 4 (lower is better)
Translates to: LLFKLKHVEAGRQGFQLPFSWLP*RVKWIL
Trigger: AAGAATCCACTTTACCCTTCAGGGAAGCCAGGAAAA...GGGGAGCTGGAAGCCTTGCCTTCCCGCTTCTACATGCTTGAGCTTGAAAAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000648440.1
CDS-3UTR GCA 90 bp CCAGCAGACTGCACTCCTCAGTCCTTTGTTAGAGTTCATATTTCTCTCTCTACCAGCCAAACAGAGGCATaGTCCGGTCGAACTCCAGCG +
Preference number: 4 (lower is better)
Translates to: PADCTPQSFVRVHISLSTSQTEA*SGRTPA
Trigger: CGCTGGAGTTCGACCGGAGCATGCCTCTGTTTGGCT...GGTAGAGAGAGAAATATGAACTCTAACAAAGGACTGAGGAGTGCAGTCTGCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
CDS-3UTR GCA 90 bp CTGCTTTTCAAGCTCAAGCATGTAGAAGCGGGAAGGCAAGGCTTCCAGCTCCCCTTCAAGATGCACTTGTaGATGGCTTTTTCCAGCACC +
Preference number: 4 (lower is better)
Translates to: LLFKLKHVEAGRQGFQLPFKMHL*MAFSST
Trigger: GGTGCTGGAAAAAGCCATGCACAAGTGCATCTTGAA...GGGGAGCTGGAAGCCTTGCCTTCCCGCTTCTACATGCTTGAGCTTGAAAAGCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000255006.12
ENST00000440354.2
ENST00000648440.1
CDS-3UTR GCA 90 bp AGTTGCCCTTGGCCGAGTTGGCCTGTGGATGGCTTAGTCACTACACTGAGGGGTGGCGAATACATCTTCTaGATGGTCATGAACTTGACT +
Preference number: 4 (lower is better)
Translates to: SCPWPSWPVDGLVTTLRGGEYIF*MVMNLT
Trigger: AGTCAAGTTCATGACCATGCAGAAGATGTATTCGCC...ACCCCTCAGTGTAGTGACTAAGCCATCCACAGGCCAACTCGGCCAAGGGCAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255006.12
ENST00000440354.2
ENST00000648440.1
CDS-3UTR GCA 90 bp CATCTTTTGAAGAGCCTGAACCAGCAGACTGCACTCCTCAGTCCTTTGTTAGAGAGGGTAAGTGTCCTCTaGCAGCTGCTGCCATGTCTC +
Preference number: 4 (lower is better)
Translates to: HLLKSLNQQTALLSPLLERVSVL*QLLPCL
Trigger: GAGACATGGCAGCAGCTGGCAGAGGACACTTACCCT...CTCTAACAAAGGACTGAGGAGTGCAGTCTGCTGGTTCAGGCTCTTCAAAAGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
CDS-3UTR CCA 90 bp TGCACTCCTCAGTCCTTTGTTAGAGTTCATATTTCTCTCTCTACCTCTCTCTACTGCAGCCATATGGGGTaGGTGTGGAGGAGCCGGTCC +
Preference number: 4 (lower is better)
Translates to: CTPQSFVRVHISLSTSLYCSHMG*VWRSRS
Trigger: GGACCGGCTCCTCCACACCCACCCCATATGGCTGCA...GTAGAGAGAGGTAGAGAGAGAAATATGAACTCTAACAAAGGACTGAGGAGTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
CDS-3UTR CCA 90 bp CATCTTTTGAAGAGCCTGAACCAGCAGACTGCACTCCTCAGTCCTTTGTTAGAGCTCAGCTACCTTGCGTaGCTAAAGTTGCCCTTGGCC +
Preference number: 4 (lower is better)
Translates to: HLLKSLNQQTALLSPLLELSYLA*LKLPLA
Trigger: GGCCAAGGGCAACTTTAGCCACGCAAGGTAGCTGAG...CTCTAACAAAGGACTGAGGAGTGCAGTCTGCTGGTTCAGGCTCTTCAAAAGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
CDS-3UTR TCA 90 bp CCAGCAGACTGCACTCCTCAGTCCTTTGTTAGAGTTCATATTTCTCTCTCTACCTTTATAAGGCAGAGCTaGCGCAGGGAGGCAGGACAG +
Preference number: 4 (lower is better)
Translates to: PADCTPQSFVRVHISLSTFIRQS*RREAGQ
Trigger: CTGTCCTGCCTCCCTGCGTCAGCTCTGCCTTATAAA...GGTAGAGAGAGAAATATGAACTCTAACAAAGGACTGAGGAGTGCAGTCTGCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
CDS-3UTR TCA 90 bp TGCACTCCTCAGTCCTTTGTTAGAGTTCATATTTCTCTCTCTACCTCTCTCTACGGTGTCTCTGGTTTCTaGGCTGAGCAGTCGCGCTGC +
Preference number: 4 (lower is better)
Translates to: CTPQSFVRVHISLSTSLYGVSGF*AEQSRC
Trigger: GCAGCGCGACTGCTCAGCTCAGAAACCAGAGACACC...GTAGAGAGAGGTAGAGAGAGAAATATGAACTCTAACAAAGGACTGAGGAGTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
CDS-3UTR GCA 90 bp CCAGCAGACTGCACTCCTCAGTCCTTTGTTAGAGTTCATATTTCTCTCTCTACCTCACTCAGACTCAGCTaGAGCCATATGGGGTGGGTG +
Preference number: 4 (lower is better)
Translates to: PADCTPQSFVRVHISLSTSLRLS*SHMGWV
Trigger: CACCCACCCCATATGGCTGCAGCTGAGTCTGAGTGA...GGTAGAGAGAGAAATATGAACTCTAACAAAGGACTGAGGAGTGCAGTCTGCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
CDS-3UTR GCA 90 bp CTACAAGCAAATCACACATGGAATAGATTTTGCCAAACCTCACTGCATATTTACATGTCGCTCAGCCGCTaGCGGCCTCCATGGCACGGG +
Preference number: 4 (lower is better)
Translates to: LQANHTWNRFCQTSLHIYMSLSR*RPPWHG
Trigger: CCCGTGCCATGGAGGCCGGCAGCGGCTGAGCGACAT...GTAAATATGCAGTGAGGTTTGGCAAAATCTATTCCATGTGTGATTTGCTTGTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
CDS-3UTR GCA 90 bp TGCACTCCTCAGTCCTTTGTTAGAGTTCATATTTCTCTCTCTACCTCTCTCTACACCCCGCTCACCTTCTaGAGCTGGGACTTGACGAGC +
Preference number: 4 (lower is better)
Translates to: CTPQSFVRVHISLSTSLYTPLTF*SWDLTS
Trigger: GCTCGTCAAGTCCCAGCTGCAGAAGGTGAGCGGGGT...GTAGAGAGAGGTAGAGAGAGAAATATGAACTCTAACAAAGGACTGAGGAGTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
CDS-3UTR GCA 90 bp CTGCTTTTCAAGCTCAAGCATGTAGAAGCGGGAAGGCAAGGCTTCCAGCTCCCCGGCGAATACATCTTCTaGATGGTCATGAACTTGACT +
Preference number: 4 (lower is better)
Translates to: LLFKLKHVEAGRQGFQLPGEYIF*MVMNLT
Trigger: AGTCAAGTTCATGACCATGCAGAAGATGTATTCGCC...GGGGAGCTGGAAGCCTTGCCTTCCCGCTTCTACATGCTTGAGCTTGAAAAGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255006.12
ENST00000440354.2
ENST00000648440.1
CDS-3UTR GCA 90 bp CAAGCATGTAGAAGCGGGAAGGCAAGGCTTCCAGCTCCCCTTTGGATGCACCACCTTTATCAGAGAAAGTaGTCCATATGCGCTTGTCAA +
Preference number: 4 (lower is better)
Translates to: QACRSGKARLPAPLWMHHLYQRK*SICACQ
Trigger: TTGACAAGCGCATATGGAGCACTTTCTCTGATAAAG...GTGGTGCATCCAAAGGGGAGCTGGAAGCCTTGCCTTCCCGCTTCTACATGCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255006.12
ENST00000440354.2
ENST00000648440.1
CDS-3UTR GCA 90 bp CCAGCAGACTGCACTCCTCAGTCCTTTGTTAGAGTTCATATTTCTCTCTCTACCCTCCGTTTGTGCCACTaGCTCAGGGTGTCTCTGGTT +
Preference number: 4 (lower is better)
Translates to: PADCTPQSFVRVHISLSTLRLCH*LRVSLV
Trigger: AACCAGAGACACCCTGAGGCAGTGGCACAAACGGAG...GGTAGAGAGAGAAATATGAACTCTAACAAAGGACTGAGGAGTGCAGTCTGCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
CDS-3UTR GCA 90 bp AGCTACCTTGCGTGGCTAAAGTTGCCCTTGGCCGAGTTGGCCTGTGGATGGCTTGTGTCAGGAATACGTTaGTTTAAGAAATCCAGCAGT +
Preference number: 4 (lower is better)
Translates to: SYLAWLKLPLAELACGWLVSGIR*FKKSSS
Trigger: ACTGCTGGATTTCTTAAAGCAACGTATTCCTGACAC...AAGCCATCCACAGGCCAACTCGGCCAAGGGCAACTTTAGCCACGCAAGGTAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
CDS-3UTR GCA 90 bp AGTTGGCCTGTGGATGGCTTAGTCACTACACTGAGGGGTCCCCGAGGAGGTGACGCACCACATTGTATGTaGTTTCCTTTATGGCAAATT +
Preference number: 4 (lower is better)
Translates to: SWPVDGLVTTLRGPRGGDAPHCM*FPLWQI
Trigger: AATTTGCCATAAAGGAAAGCACATACAATGTGGTGC...GTCACCTCCTCGGGGACCCCTCAGTGTAGTGACTAAGCCATCCACAGGCCAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000440354.2
CDS-3UTR CCA 90 bp CATCTTTTGAAGAGCCTGAACCAGCAGACTGCACTCCTCAGTCCTTTGTTAGAGTGTCTTACCATGCTGTaGGTTTCAGCGGGTTCCAGG +
Preference number: 4 (lower is better)
Translates to: HLLKSLNQQTALLSPLLECLTML*VSAGSR
Trigger: CCTGGAACCCGCTGAAACCCACAGCATGGTAAGACA...CTCTAACAAAGGACTGAGGAGTGCAGTCTGCTGGTTCAGGCTCTTCAAAAGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
CDS-3UTR CCA 90 bp AGCAAAACACCACTAAACGTGAACAAGAGAACAGTACATCCGATTTCCAAAGGCTCAGCTGCAGCCATATaGGGTGGGTGTGGAGGAGCC +
Preference number: 4 (lower is better)
Translates to: SKTPLNVNKRTVHPISKGSAAAI*GGCGGA
Trigger: GGCTCCTCCACACCCACCCCATATGGCTGCAGCTGA...GCCTTTGGAAATCGGATGTACTGTTCTCTTGTTCACGTTTAGTGGTGTTTTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
CDS-3UTR CCA 90 bp ACGTGGATACAAGACCCTCATAGTTTGTGCACCTGCAAACTGGTTTTATTTAACCCGTGCCATTCGCGTTaGGAGTCCTTGTGCTCGGCC +
Preference number: 4 (lower is better)
Translates to: TWIQDPHSLCTCKLVLFNPCHSR*ESLCSA
Trigger: GGCCGAGCACAAGGACTCCCAACGCGAATGGCACGG...GTTAAATAAAACCAGTTTGCAGGTGCACAAACTATGAGGGTCTTGTATCCACGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
CDS-3UTR CCA 90 bp ACGTGGATACAAGACCCTCATAGTTTGTGCACCTGCAAACTGGTTTTATTTAACACTATTAATAGCGGGTaGCGGGGGCCTGGGTGGGGG +
Preference number: 4 (lower is better)
Translates to: TWIQDPHSLCTCKLVLFNTINSG*RGPGWG
Trigger: CCCCCACCCAGGCCCCCGCCACCCGCTATTAATAGT...GTTAAATAAAACCAGTTTGCAGGTGCACAAACTATGAGGGTCTTGTATCCACGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
CDS-3UTR CCA 90 bp GTCCCCGAGGAGGTGACTGCTTTTCAAGCTCAAGCATGTAGAAGCGGGAAGGCAACTACCTGTGTTACGTaGATACAAGACCCTCATAGT +
Preference number: 4 (lower is better)
Translates to: VPEEVTAFQAQACRSGKATTCVT*IQDPHS
Trigger: ACTATGAGGGTCTTGTATCCACGTAACACAGGTAGT...TGCCTTCCCGCTTCTACATGCTTGAGCTTGAAAAGCAGTCACCTCCTCGGGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
CDS-3UTR TCA 90 bp CCAGCAGACTGCACTCCTCAGTCCTTTGTTAGAGTTCATATTTCTCTCTCTACCGGCCATTTTCCAGGTTaGCATCTGTCCGCACCATCT +
Preference number: 4 (lower is better)
Translates to: PADCTPQSFVRVHISLSTGHFPG*HLSAPS
Trigger: AGATGGTGCGGACAGATGTCAACCTGGAAAATGGCC...GGTAGAGAGAGAAATATGAACTCTAACAAAGGACTGAGGAGTGCAGTCTGCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
CDS-3UTR TCA 90 bp CAATTCTCCATTGCCAAAAGAGAATCCTACTGTTTCACAAACCTCAGCTACCTTGCCGGTCCAAGATGCTaGGCCTGTTGGAGAGGCTGT +
Preference number: 4 (lower is better)
Translates to: QFSIAKRESYCFTNLSYLAGPRC*ACWRGC
Trigger: ACAGCCTCTCCAACAGGCTCAGCATCTTGGACCGGC...AAGGTAGCTGAGGTTTGTGAAACAGTAGGATTCTCTTTTGGCAATGGAGAATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255006.12
ENST00000440354.2
ENST00000648440.1
CDS-3UTR TCA 90 bp TGCACTCCTCAGTCCTTTGTTAGAGTTCATATTTCTCTCTCTACCTCTCTCTACGTTTCAGGCCTCCACTaGGGTCCTGGCTGTGCACTT +
Preference number: 4 (lower is better)
Translates to: CTPQSFVRVHISLSTSLYVSGLH*GPGCAL
Trigger: AAGTGCACAGCCAGGACCTCAGTGGAGGCCTGAAAC...GTAGAGAGAGGTAGAGAGAGAAATATGAACTCTAACAAAGGACTGAGGAGTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
CDS-3UTR TCA 90 bp ATGCAATTCTCCATTGCCAAAAGAGAATCCTACTGTTTCACAAACCTCAGCTACTCTGCAGCTGGGACTTaGCGAGCTTGGGCAGCACGA +
Preference number: 4 (lower is better)
Translates to: MQFSIAKRESYCFTNLSYSAAGT*RAWAAR
Trigger: TCGTGCTGCCCAAGCTCGTCAAGTCCCAGCTGCAGA...GTAGCTGAGGTTTGTGAAACAGTAGGATTCTCTTTTGGCAATGGAGAATTGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
CDS-3UTR TCA 90 bp CGCACTGCATCGCAAGCATCTGCTGTTGAATTCAAAAGAACTTGTATCTTAAGTCCTCCACGTGCCCCTTaGGGGGCTTCAAGATGCACT +
Preference number: 4 (lower is better)
Translates to: RTASQASAVEFKRTCILSPPRAP*GASRCT
Trigger: AGTGCATCTTGAAGCCCCTCAAGGGGCACGTGGAGG...ACTTAAGATACAAGTTCTTTTGAATTCAACAGCAGATGCTTGCGATGCAGTGCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000255006.12
ENST00000440354.2
ENST00000648440.1
CDS-3UTR TCA 90 bp ATGCAATTCTCCATTGCCAAAAGAGAATCCTACTGTTTCACAAACCTCAGCTACGGTGTCTCTGGTTTCTaGGCTGAGCAGTCGCGCTGC +
Preference number: 4 (lower is better)
Translates to: MQFSIAKRESYCFTNLSYGVSGF*AEQSRC
Trigger: GCAGCGCGACTGCTCAGCTCAGAAACCAGAGACACC...GTAGCTGAGGTTTGTGAAACAGTAGGATTCTCTTTTGGCAATGGAGAATTGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255006.12
ENST00000440354.2
ENST00000648440.1
CDS-3UTR TCA 90 bp CCAGCAGACTGCACTCCTCAGTCCTTTGTTAGAGTTCATATTTCTCTCTCTACCTCTTCTAGGAGGTGGTaGGGTCTTCTTCCCCGTTCT +
Preference number: 4 (lower is better)
Translates to: PADCTPQSFVRVHISLSTSSRRW*GLLPRS
Trigger: AGAACGGGGAAGAAGACCTCACCACCTCCTAGAAGA...GGTAGAGAGAGAAATATGAACTCTAACAAAGGACTGAGGAGTGCAGTCTGCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
CDS-3UTR TCA 90 bp CCAGCAGACTGCACTCCTCAGTCCTTTGTTAGAGTTCATATTTCTCTCTCTACCAGCCAACCTAGAACCTaGCTGGGGGTAGGTAGCAAA +
Preference number: 4 (lower is better)
Translates to: PADCTPQSFVRVHISLSTSQPRT*LGVGSK
Trigger: TTTGCTACCTACCCCCAGTCAGGTTCTAGGTTGGCT...GGTAGAGAGAGAAATATGAACTCTAACAAAGGACTGAGGAGTGCAGTCTGCTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
CDS-3UTR TCA 90 bp AGTTGCCCTTGGCCGAGTTGGCCTGTGGATGGCTTAGTCACTACACTGAGGGGTGCAAGCATCTGCTGTTaGATTCAAAAGAACTTGTAT +
Preference number: 4 (lower is better)
Translates to: SCPWPSWPVDGLVTTLRGASICC*IQKNLY
Trigger: ATACAAGTTCTTTTGAATTCAACAGCAGATGCTTGC...ACCCCTCAGTGTAGTGACTAAGCCATCCACAGGCCAACTCGGCCAAGGGCAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255006.12
ENST00000440354.2
ENST00000648440.1
CDS-3UTR TCA 90 bp CCAGCAGACTGCACTCCTCAGTCCTTTGTTAGAGTTCATATTTCTCTCTCTACCGGGGACTCCGTAGTTTaGGAGGCTGTGAAATTCCTC +
Preference number: 4 (lower is better)
Translates to: PADCTPQSFVRVHISLSTGDSVV*EAVKFL
Trigger: GAGGAATTTCACAGCCTCTCAAACTACGGAGTCCCC...GGTAGAGAGAGAAATATGAACTCTAACAAAGGACTGAGGAGTGCAGTCTGCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648440.1
CDS-3UTR GCA 90 bp CAAGCATGTAGAAGCGGGAAGGCAAGGCTTCCAGCTCCCCTTTGGATGCACCACCTGGTTTTGATAGAATaGACTCCATTTATAAGGCAG +
Preference number: 4 (lower is better)
Translates to: QACRSGKARLPAPLWMHHLVLIE*TPFIRQ
Trigger: CTGCCTTATAAATGGAGTGCATTCTATCAAAACCAG...GTGGTGCATCCAAAGGGGAGCTGGAAGCCTTGCCTTCCCGCTTCTACATGCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
CDS-3UTR GCA 90 bp CAATTCTCCATTGCCAAAAGAGAATCCTACTGTTTCACAAACCTCAGCTACCTTACCCCGCTCACCTTCTaGAGCTGGGACTTGACGAGC +
Preference number: 4 (lower is better)
Translates to: QFSIAKRESYCFTNLSYLTPLTF*SWDLTS
Trigger: GCTCGTCAAGTCCCAGCTGCAGAAGGTGAGCGGGGT...AAGGTAGCTGAGGTTTGTGAAACAGTAGGATTCTCTTTTGGCAATGGAGAATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
CDS-3UTR GCA 90 bp CAATTCTCCATTGCCAAAAGAGAATCCTACTGTTTCACAAACCTCAGCTACCTTAAAGCTCGGCGATCCTaGGGACCATCCGCTTCTCCG +
Preference number: 4 (lower is better)
Translates to: QFSIAKRESYCFTNLSYLKARRS*GPSASP
Trigger: CGGAGAAGCGGATGGTCCGCAGGATCGCCGAGCTTT...AAGGTAGCTGAGGTTTGTGAAACAGTAGGATTCTCTTTTGGCAATGGAGAATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
CDS-3UTR GCA 90 bp CGCACTGCATCGCAAGCATCTGCTGTTGAATTCAAAAGAACTTGTATCTTAAGTAGCATGGCCTCCACGTaGCCCTTGAGGGGCTTCAAG +
Preference number: 4 (lower is better)
Translates to: RTASQASAVEFKRTCILSSMAST*PLRGFK
Trigger: CTTGAAGCCCCTCAAGGGGCACGTGGAGGCCATGCT...ACTTAAGATACAAGTTCTTTTGAATTCAACAGCAGATGCTTGCGATGCAGTGCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255006.12
ENST00000440354.2
ENST00000648440.1
CDS-3UTR GCA 90 bp AGCAAAACACCACTAAACGTGAACAAGAGAACAGTACATCCGATTTCCAAAGGCTCCTGCGGATTCCTCTaGCGCACAAGCTGCAGGTTC +
Preference number: 4 (lower is better)
Translates to: SKTPLNVNKRTVHPISKGSCGFL*RTSCRF
Trigger: GAACCTGCAGCTTGTGCGGCAGAGGAATCCGCAGGA...GCCTTTGGAAATCGGATGTACTGTTCTCTTGTTCACGTTTAGTGGTGTTTTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
CDS-3UTR GCA 90 bp TGCACTCCTCAGTCCTTTGTTAGAGTTCATATTTCTCTCTCTACCTCTCTCTACGTGTCCTCTGCCAGCTaGTGCCATGTCTCGTCAACG +
Preference number: 4 (lower is better)
Translates to: CTPQSFVRVHISLSTSLYVSSAS*CHVSST
Trigger: CGTTGACGAGACATGGCAGCAGCTGGCAGAGGACAC...GTAGAGAGAGGTAGAGAGAGAAATATGAACTCTAACAAAGGACTGAGGAGTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
CDS-3UTR GCA 90 bp CGCACTGCATCGCAAGCATCTGCTGTTGAATTCAAAAGAACTTGTATCTTAAGTCAGCTCCCCTTTGGATaGACCACTGGGAAGTCCCGC +
Preference number: 4 (lower is better)
Translates to: RTASQASAVEFKRTCILSQLPFG*TTGKSR
Trigger: GCGGGACTTCCCAGTGGTGCATCCAAAGGGGAGCTG...ACTTAAGATACAAGTTCTTTTGAATTCAACAGCAGATGCTTGCGATGCAGTGCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255006.12
ENST00000440354.2
ENST00000648440.1
CDS-3UTR CCA 90 bp CAATTCTCCATTGCCAAAAGAGAATCCTACTGTTTCACAAACCTCAGCTACCTTAGGGCCCCGTTGGTCTaGCTGCACTCCAGCTCTGAA +
Preference number: 4 (lower is better)
Translates to: QFSIAKRESYCFTNLSYLRAPLV*LHSSSE
Trigger: TTCAGAGCTGGAGTGCAGCCAGACCAACGGGGCCCT...AAGGTAGCTGAGGTTTGTGAAACAGTAGGATTCTCTTTTGGCAATGGAGAATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
CDS-3UTR CCA 90 bp CGCACTGCATCGCAAGCATCTGCTGTTGAATTCAAAAGAACTTGTATCTTAAGTAGGGCCCCGTTGGTCTaGCTGCACTCCAGCTCTGAA +
Preference number: 4 (lower is better)
Translates to: RTASQASAVEFKRTCILSRAPLV*LHSSSE
Trigger: TTCAGAGCTGGAGTGCAGCCAGACCAACGGGGCCCT...ACTTAAGATACAAGTTCTTTTGAATTCAACAGCAGATGCTTGCGATGCAGTGCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
CDS-3UTR CCA 90 bp CATCTTTTGAAGAGCCTGAACCAGCAGACTGCACTCCTCAGTCCTTTGTTAGAGCCTCCACTGAGGTCCTaGCTGTGCACTTTCAAGAAA +
Preference number: 4 (lower is better)
Translates to: HLLKSLNQQTALLSPLLEPPLRS*LCTFKK
Trigger: TTTCTTGAAAGTGCACAGCCAGGACCTCAGTGGAGG...CTCTAACAAAGGACTGAGGAGTGCAGTCTGCTGGTTCAGGCTCTTCAAAAGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
CDS-3UTR CCA 90 bp TGCACTCCTCAGTCCTTTGTTAGAGTTCATATTTCTCTCTCTACCTCTCTCTACTCGGTGCTGGACACGTaGCACTCCTTGTTCTCCTGC +
Preference number: 4 (lower is better)
Translates to: CTPQSFVRVHISLSTSLYSVLDT*HSLFSC
Trigger: GCAGGAGAACAAGGAGTGCCACGTGTCCAGCACCGA...GTAGAGAGAGGTAGAGAGAGAAATATGAACTCTAACAAAGGACTGAGGAGTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
CDS-3UTR CCA 90 bp ATGCAATTCTCCATTGCCAAAAGAGAATCCTACTGTTTCACAAACCTCAGCTACCGTCCACAGAGGGGATaGTCCGGTTGGTGGTTCTCC +
Preference number: 4 (lower is better)
Translates to: MQFSIAKRESYCFTNLSYRPQRG*SGWWFS
Trigger: GGAGAACCACCAACCGGACCATCCCCTCTGTGGACG...GTAGCTGAGGTTTGTGAAACAGTAGGATTCTCTTTTGGCAATGGAGAATTGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255006.12
ENST00000440354.2
ENST00000648440.1
CDS-3UTR CCA 90 bp CATCTTTTGAAGAGCCTGAACCAGCAGACTGCACTCCTCAGTCCTTTGTTAGAGGAGTTGGCCTGTGGATaGCTTAGTCACTACACTGAG +
Preference number: 4 (lower is better)
Translates to: HLLKSLNQQTALLSPLLEELACG*LSHYTE
Trigger: CTCAGTGTAGTGACTAAGCCATCCACAGGCCAACTC...CTCTAACAAAGGACTGAGGAGTGCAGTCTGCTGGTTCAGGCTCTTCAAAAGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
CDS-3UTR GCA 90 bp CTACAAGCAAATCACACATGGAATAGATTTTGCCAAACCTCACTGCATATTTACGGCCTGCAGGACCTCTaGTGCCTCCTCCTCACTCAG +
Preference number: 4 (lower is better)
Translates to: LQANHTWNRFCQTSLHIYGLQDL*CLLLTQ
Trigger: CTGAGTGAGGAGGAGGCAGCAGAGGTCCTGCAGGCC...GTAAATATGCAGTGAGGTTTGGCAAAATCTATTCCATGTGTGATTTGCTTGTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
CDS-3UTR GCA 90 bp GTCCCCGAGGAGGTGACTGCTTTTCAAGCTCAAGCATGTAGAAGCGGGAAGGCAGGGAAAAGGTGTATGTaGTTTCCTTTATGGCAAATT +
Preference number: 4 (lower is better)
Translates to: VPEEVTAFQAQACRSGKAGKRCM*FPLWQI
Trigger: AATTTGCCATAAAGGAAAGCACATACACCTTTTCCC...TGCCTTCCCGCTTCTACATGCTTGAGCTTGAAAAGCAGTCACCTCCTCGGGGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
CDS-3UTR GCA 90 bp ACGTGGATACAAGACCCTCATAGTTTGTGCACCTGCAAACTGGTTTTATTTAACAGCCAAACAGAGGCATaGTCCGGTCGAACTCCAGCG +
Preference number: 4 (lower is better)
Translates to: TWIQDPHSLCTCKLVLFNSQTEA*SGRTPA
Trigger: CGCTGGAGTTCGACCGGAGCATGCCTCTGTTTGGCT...GTTAAATAAAACCAGTTTGCAGGTGCACAAACTATGAGGGTCTTGTATCCACGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
CDS-3UTR GCA 90 bp TGCACTCCTCAGTCCTTTGTTAGAGTTCATATTTCTCTCTCTACCTCTCTCTACCTCTGCCGCACAAGCTaGAGGTTCTCCTTGAGTTGC +
Preference number: 4 (lower is better)
Translates to: CTPQSFVRVHISLSTSLYLCRTS*RFSLSC
Trigger: GCAACTCAAGGAGAACCTGCAGCTTGTGCGGCAGAG...GTAGAGAGAGGTAGAGAGAGAAATATGAACTCTAACAAAGGACTGAGGAGTGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
CDS-3UTR GCA 90 bp AGCAAAACACCACTAAACGTGAACAAGAGAACAGTACATCCGATTTCCAAAGGCCTCCGTTTGTGCCACTaGCTCAGGGTGTCTCTGGTT +
Preference number: 4 (lower is better)
Translates to: SKTPLNVNKRTVHPISKGLRLCH*LRVSLV
Trigger: AACCAGAGACACCCTGAGGCAGTGGCACAAACGGAG...GCCTTTGGAAATCGGATGTACTGTTCTCTTGTTCACGTTTAGTGGTGTTTTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
CDS-3UTR GCA 90 bp AGCAAAACACCACTAAACGTGAACAAGAGAACAGTACATCCGATTTCCAAAGGCTCCTCTGCCAGCTGCTaGCATGTCTCGTCAACGAAG +
Preference number: 4 (lower is better)
Translates to: SKTPLNVNKRTVHPISKGSSASC*HVSSTK
Trigger: CTTCGTTGACGAGACATGGCAGCAGCTGGCAGAGGA...GCCTTTGGAAATCGGATGTACTGTTCTCTTGTTCACGTTTAGTGGTGTTTTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
CDS-3UTR CCA 90 bp CAATTCTCCATTGCCAAAAGAGAATCCTACTGTTTCACAAACCTCAGCTACCTTTCTGGGTTTCAGTCCTaGCCAGCCGAGGGCTTGTGT +
Preference number: 4 (lower is better)
Translates to: QFSIAKRESYCFTNLSYLSGFQS*PAEGLC
Trigger: ACACAAGCCCTCGGCTGGCCAGGACTGAAACCCAGA...AAGGTAGCTGAGGTTTGTGAAACAGTAGGATTCTCTTTTGGCAATGGAGAATTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
CDS-3UTR CCA 90 bp CAATTCTCCATTGCCAAAAGAGAATCCTACTGTTTCACAAACCTCAGCTACCTTTCTGGCATGCTCGTCTaGGTTTCAGTCCTGGCCAGC +
Preference number: 4 (lower is better)
Translates to: QFSIAKRESYCFTNLSYLSGMLV*VSVLAS
Trigger: GCTGGCCAGGACTGAAACCCAGACGAGCATGCCAGA...AAGGTAGCTGAGGTTTGTGAAACAGTAGGATTCTCTTTTGGCAATGGAGAATTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
CDS-3UTR CCA 90 bp ATGCAATTCTCCATTGCCAAAAGAGAATCCTACTGTTTCACAAACCTCAGCTACCTCACCTTCTGCAGCTaGGACTTGACGAGCTTGGGC +
Preference number: 4 (lower is better)
Translates to: MQFSIAKRESYCFTNLSYLTFCS*DLTSLG
Trigger: GCCCAAGCTCGTCAAGTCCCAGCTGCAGAAGGTGAG...GTAGCTGAGGTTTGTGAAACAGTAGGATTCTCTTTTGGCAATGGAGAATTGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
CDS-3UTR CCA 90 bp AGCAAAACACCACTAAACGTGAACAAGAGAACAGTACATCCGATTTCCAAAGGCACAAAGTGGAAGATGTaGGGCTGTGGTCGGCTGTGC +
Preference number: 4 (lower is better)
Translates to: SKTPLNVNKRTVHPISKGTKWKM*GCGRLC
Trigger: GCACAGCCGACCACAGCCCCACATCTTCCACTTTGT...GCCTTTGGAAATCGGATGTACTGTTCTCTTGTTCACGTTTAGTGGTGTTTTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
CDS-3UTR CCA 90 bp ATGCAATTCTCCATTGCCAAAAGAGAATCCTACTGTTTCACAAACCTCAGCTACTGCCCTTGGCCGAGTTaGCCTGTGGATGGCTTAGTC +
Preference number: 4 (lower is better)
Translates to: MQFSIAKRESYCFTNLSYCPWPS*PVDGLV
Trigger: GACTAAGCCATCCACAGGCCAACTCGGCCAAGGGCA...GTAGCTGAGGTTTGTGAAACAGTAGGATTCTCTTTTGGCAATGGAGAATTGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255006.12
ENST00000440354.2
ENST00000648440.1
CDS-3UTR TCA 90 bp ATGCAATTCTCCATTGCCAAAAGAGAATCCTACTGTTTCACAAACCTCAGCTACGCCAGTTCTTCAAGCTaGGCCTCCGACTTGGCTGTT +
Preference number: 4 (lower is better)
Translates to: MQFSIAKRESYCFTNLSYASSSS*ASDLAV
Trigger: AACAGCCAAGTCGGAGGCTCAGCTTGAAGAACTGGC...GTAGCTGAGGTTTGTGAAACAGTAGGATTCTCTTTTGGCAATGGAGAATTGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
CDS-3UTR TCA 90 bp CGCACTGCATCGCAAGCATCTGCTGTTGAATTCAAAAGAACTTGTATCTTAAGTGCCAGTTCTTCAAGCTaGGCCTCCGACTTGGCTGTT +
Preference number: 4 (lower is better)
Translates to: RTASQASAVEFKRTCILSASSSS*ASDLAV
Trigger: AACAGCCAAGTCGGAGGCTCAGCTTGAAGAACTGGC...ACTTAAGATACAAGTTCTTTTGAATTCAACAGCAGATGCTTGCGATGCAGTGCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
CDS-3UTR TCA 90 bp CGCACTGCATCGCAAGCATCTGCTGTTGAATTCAAAAGAACTTGTATCTTAAGTTTTATAAGGCAGAGCTaGCGCAGGGAGGCAGGACAG +
Preference number: 4 (lower is better)
Translates to: RTASQASAVEFKRTCILSFIRQS*RREAGQ
Trigger: CTGTCCTGCCTCCCTGCGTCAGCTCTGCCTTATAAA...ACTTAAGATACAAGTTCTTTTGAATTCAACAGCAGATGCTTGCGATGCAGTGCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
CDS-3UTR TCA 90 bp ACGTGGATACAAGACCCTCATAGTTTGTGCACCTGCAAACTGGTTTTATTTAACGCTGCACTCCAGCTCTaGAGGCGTCCTGGTTTTGAT +
Preference number: 4 (lower is better)
Translates to: TWIQDPHSLCTCKLVLFNAALQL*RRPGFD
Trigger: ATCAAAACCAGGACGCCTTCAGAGCTGGAGTGCAGC...GTTAAATAAAACCAGTTTGCAGGTGCACAAACTATGAGGGTCTTGTATCCACGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
CDS-3UTR TCA 90 bp CCAGCAGACTGCACTCCTCAGTCCTTTGTTAGAGTTCATATTTCTCTCTCTACCACACATCCTCAGTGGTaGTGTAAGGTCTCACAAGGA +
Preference number: 4 (lower is better)
Translates to: PADCTPQSFVRVHISLSTTHPQW*CKVSQG
Trigger: TCCTTGTGAGACCTTACATCACCACTGAGGATGTGT...GGTAGAGAGAGAAATATGAACTCTAACAAAGGACTGAGGAGTGCAGTCTGCTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
CDS-3UTR TCA 90 bp TGCACTCCTCAGTCCTTTGTTAGAGTTCATATTTCTCTCTCTACCTCTCTCTACTTCTCAGCGCAGATCTaGCACACATCCTCAGTGGTG +
Preference number: 4 (lower is better)
Translates to: CTPQSFVRVHISLSTSLYFSAQI*HTSSVV
Trigger: CACCACTGAGGATGTGTGTCAGATCTGCGCTGAGAA...GTAGAGAGAGGTAGAGAGAGAAATATGAACTCTAACAAAGGACTGAGGAGTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
CDS-3UTR TCA 90 bp CGCACTGCATCGCAAGCATCTGCTGTTGAATTCAAAAGAACTTGTATCTTAAGTGGAGTGAGAATCACCTaGCGCACTGCATCGCAAGCA +
Preference number: 4 (lower is better)
Translates to: RTASQASAVEFKRTCILSGVRIT*RTASQA
Trigger: TGCTTGCGATGCAGTGCGTCAGGTGATTCTCACTCC...ACTTAAGATACAAGTTCTTTTGAATTCAACAGCAGATGCTTGCGATGCAGTGCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255006.12
ENST00000440354.2
ENST00000648440.1
CDS-3UTR TCA 90 bp CAATTCTCCATTGCCAAAAGAGAATCCTACTGTTTCACAAACCTCAGCTACCTTAGCCATCCACAGGAGTaGGAATCACCTGACGCACTG +
Preference number: 4 (lower is better)
Translates to: QFSIAKRESYCFTNLSYLSHPQE*ESPDAL
Trigger: CAGTGCGTCAGGTGATTCTCACTCCTGTGGATGGCT...AAGGTAGCTGAGGTTTGTGAAACAGTAGGATTCTCTTTTGGCAATGGAGAATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255006.12
ENST00000440354.2
ENST00000648440.1
CDS-3UTR GCA 90 bp CTACAAGCAAATCACACATGGAATAGATTTTGCCAAACCTCACTGCATATTTACGAAGGTTCGGGGGTTTaGTGTCAGCTGGGGAGCTCC +
Preference number: 4 (lower is better)
Translates to: LQANHTWNRFCQTSLHIYEGSGV*CQLGSS
Trigger: GGAGCTCCCCAGCTGACAGCAAACCCCCGAACCTTC...GTAAATATGCAGTGAGGTTTGGCAAAATCTATTCCATGTGTGATTTGCTTGTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
CDS-3UTR GCA 90 bp CAATTCTCCATTGCCAAAAGAGAATCCTACTGTTTCACAAACCTCAGCTACCTTACCTGGGTCATGAACTaGCGGATGGTCTGCAGCATG +
Preference number: 4 (lower is better)
Translates to: QFSIAKRESYCFTNLSYLTWVMN*RMVCSM
Trigger: CATGCTGCAGACCATCCGGCAGTTCATGACCCAGGT...AAGGTAGCTGAGGTTTGTGAAACAGTAGGATTCTCTTTTGGCAATGGAGAATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
CDS-3UTR GCA 90 bp AGCAAAACACCACTAAACGTGAACAAGAGAACAGTACATCCGATTTCCAAAGGCAGGTTCTCCTTGAGTTaGTTCCATGAGCCATCGGCC +
Preference number: 4 (lower is better)
Translates to: SKTPLNVNKRTVHPISKGRFSLS*FHEPSA
Trigger: GGCCGATGGCTCATGGAAGCAACTCAAGGAGAACCT...GCCTTTGGAAATCGGATGTACTGTTCTCTTGTTCACGTTTAGTGGTGTTTTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
CDS-3UTR GCA 90 bp CGCACTGCATCGCAAGCATCTGCTGTTGAATTCAAAAGAACTTGTATCTTAAGTTCCTCTGCCAGCTGCTaGCATGTCTCGTCAACGAAG +
Preference number: 4 (lower is better)
Translates to: RTASQASAVEFKRTCILSSSASC*HVSSTK
Trigger: CTTCGTTGACGAGACATGGCAGCAGCTGGCAGAGGA...ACTTAAGATACAAGTTCTTTTGAATTCAACAGCAGATGCTTGCGATGCAGTGCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255006.12
ENST00000440354.2
ENST00000648440.1
CDS-3UTR GCA 90 bp ATGCAATTCTCCATTGCCAAAAGAGAATCCTACTGTTTCACAAACCTCAGCTACAGGGTAAGTGTCCTCTaGCAGCTGCTGCCATGTCTC +
Preference number: 4 (lower is better)
Translates to: MQFSIAKRESYCFTNLSYRVSVL*QLLPCL
Trigger: GAGACATGGCAGCAGCTGGCAGAGGACACTTACCCT...GTAGCTGAGGTTTGTGAAACAGTAGGATTCTCTTTTGGCAATGGAGAATTGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255006.12
ENST00000440354.2
ENST00000648440.1
CDS-3UTR CCA 90 bp AGCAAAACACCACTAAACGTGAACAAGAGAACAGTACATCCGATTTCCAAAGGCGGCAAATTCCTTGAGTaGGGCCCCAAATTCACAGGG +
Preference number: 4 (lower is better)
Translates to: SKTPLNVNKRTVHPISKGGKFLE*GPKFTG
Trigger: CCCTGTGAATTTGGGGCCCCACTCAAGGAATTTGCC...GCCTTTGGAAATCGGATGTACTGTTCTCTTGTTCACGTTTAGTGGTGTTTTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
CDS-3UTR CCA 90 bp CCAGCAGACTGCACTCCTCAGTCCTTTGTTAGAGTTCATATTTCTCTCTCTACCATGGTTGACTGTTTCTaGCATGCTCGTCTGGGTTTC +
Preference number: 4 (lower is better)
Translates to: PADCTPQSFVRVHISLSTMVDCF*HARLGF
Trigger: GAAACCCAGACGAGCATGCCAGAAACAGTCAACCAT...GGTAGAGAGAGAAATATGAACTCTAACAAAGGACTGAGGAGTGCAGTCTGCTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
CDS-3UTR CCA 90 bp ACGTGGATACAAGACCCTCATAGTTTGTGCACCTGCAAACTGGTTTTATTTAACTGGAGGGATGGGAGTTaGTTTCGTTCCAGGCAGAGC +
Preference number: 4 (lower is better)
Translates to: TWIQDPHSLCTCKLVLFNWRDGS*FRSRQS
Trigger: GCTCTGCCTGGAACGAAACCAACTCCCATCCCTCCA...GTTAAATAAAACCAGTTTGCAGGTGCACAAACTATGAGGGTCTTGTATCCACGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
CDS-3UTR CCA 90 bp CTACAAGCAAATCACACATGGAATAGATTTTGCCAAACCTCACTGCATATTTACCCTCCAGGCTGCTGTTaGTGTCCGCCTCGTAGCCAA +
Preference number: 4 (lower is better)
Translates to: LQANHTWNRFCQTSLHIYPPGCC*CPPRSQ
Trigger: TTGGCTACGAGGCGGACACCAACAGCAGCCTGGAGG...GTAAATATGCAGTGAGGTTTGGCAAAATCTATTCCATGTGTGATTTGCTTGTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
CDS-3UTR CCA 90 bp CCAGCAGACTGCACTCCTCAGTCCTTTGTTAGAGTTCATATTTCTCTCTCTACCAGCACCACATCTATTTaGTCTTCAGGGATCAGCGAC +
Preference number: 4 (lower is better)
Translates to: PADCTPQSFVRVHISLSTSTTSI*SSGISD
Trigger: GTCGCTGATCCCTGAAGACCAAATAGATGTGGTGCT...GGTAGAGAGAGAAATATGAACTCTAACAAAGGACTGAGGAGTGCAGTCTGCTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
CDS-3UTR CCA 90 bp CACAGTACAATAACATGTTTTTGTAACTACCTGTGTTACGTGGATACAAGACCCTGCCCTTGGCCGAGTTaGCCTGTGGATGGCTTAGTC +
Preference number: 4 (lower is better)
Translates to: HSTITCFCNYLCYVDTRPCPWPS*PVDGLV
Trigger: GACTAAGCCATCCACAGGCCAACTCGGCCAAGGGCA...GGGTCTTGTATCCACGTAACACAGGTAGTTACAAAAACATGTTATTGTACTGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
CDS-3UTR TCA 90 bp TGCACTCCTCAGTCCTTTGTTAGAGTTCATATTTCTCTCTCTACCTCTCTCTACCTGTGCAACCACTGTTaGCCTCCTGAAATGCAACTC +
Preference number: 4 (lower is better)
Translates to: CTPQSFVRVHISLSTSLYLCNHC*PPEMQL
Trigger: GAGTTGCATTTCAGGAGGTCAACAGTGGTTGCACAG...GTAGAGAGAGGTAGAGAGAGAAATATGAACTCTAACAAAGGACTGAGGAGTGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
CDS-3UTR TCA 90 bp CAATTCTCCATTGCCAAAAGAGAATCCTACTGTTTCACAAACCTCAGCTACCTTTCTTCTAGGAGGTGGTaGGGTCTTCTTCCCCGTTCT +
Preference number: 4 (lower is better)
Translates to: QFSIAKRESYCFTNLSYLSSRRW*GLLPRS
Trigger: AGAACGGGGAAGAAGACCTCACCACCTCCTAGAAGA...AAGGTAGCTGAGGTTTGTGAAACAGTAGGATTCTCTTTTGGCAATGGAGAATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255006.12
ENST00000440354.2
ENST00000648440.1
CDS-3UTR TCA 90 bp CGCACTGCATCGCAAGCATCTGCTGTTGAATTCAAAAGAACTTGTATCTTAAGTAGCCAACCTAGAACCTaGCTGGGGGTAGGTAGCAAA +
Preference number: 4 (lower is better)
Translates to: RTASQASAVEFKRTCILSSQPRT*LGVGSK
Trigger: TTTGCTACCTACCCCCAGTCAGGTTCTAGGTTGGCT...ACTTAAGATACAAGTTCTTTTGAATTCAACAGCAGATGCTTGCGATGCAGTGCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000255006.12
ENST00000440354.2
ENST00000648440.1
CDS-3UTR GCA 90 bp TTCTACAAGCAAATCACACATGGAATAGATTTTGCCAAACCTCACTGCATATTTCGTTGGGAGTCCTTGTaGTCGGCCGTTTCAGGCCTC +
Preference number: 4 (lower is better)
Translates to: FYKQITHGIDFAKPHCIFRWESL*SAVSGL
Trigger: GAGGCCTGAAACGGCCGAGCACAAGGACTCCCAACG...AAATATGCAGTGAGGTTTGGCAAAATCTATTCCATGTGTGATTTGCTTGTAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
CDS-3UTR GCA 90 bp CGCACTGCATCGCAAGCATCTGCTGTTGAATTCAAAAGAACTTGTATCTTAAGTCTTTGCACCGCCCTCTaGTTCCAGAAAAGAAGCCTG +
Preference number: 4 (lower is better)
Translates to: RTASQASAVEFKRTCILSLCTAL*FQKRSL
Trigger: CAGGCTTCTTTTCTGGAAGCAGAGGGCGGTGCAAAG...ACTTAAGATACAAGTTCTTTTGAATTCAACAGCAGATGCTTGCGATGCAGTGCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
CDS-3UTR GCA 90 bp ACGTGGATACAAGACCCTCATAGTTTGTGCACCTGCAAACTGGTTTTATTTAACCTTTGCACCGCCCTCTaGTTCCAGAAAAGAAGCCTG +
Preference number: 4 (lower is better)
Translates to: TWIQDPHSLCTCKLVLFNLCTAL*FQKRSL
Trigger: CAGGCTTCTTTTCTGGAAGCAGAGGGCGGTGCAAAG...GTTAAATAAAACCAGTTTGCAGGTGCACAAACTATGAGGGTCTTGTATCCACGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
CDS-3UTR GCA 90 bp TTCTACAAGCAAATCACACATGGAATAGATTTTGCCAAACCTCACTGCATATTTGCCGCTCAAGGTCTTTaGACCGCCCTCTGCTTCCAG +
Preference number: 4 (lower is better)
Translates to: FYKQITHGIDFAKPHCIFAAQGL*TALCFQ
Trigger: CTGGAAGCAGAGGGCGGTGCAAAGACCTTGAGCGGC...AAATATGCAGTGAGGTTTGGCAAAATCTATTCCATGTGTGATTTGCTTGTAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
CDS-3UTR GCA 90 bp CTACAAGCAAATCACACATGGAATAGATTTTGCCAAACCTCACTGCATATTTACAACTGCCGGATGGTCTaGAGCATGTCGGTGCTGGAC +
Preference number: 4 (lower is better)
Translates to: LQANHTWNRFCQTSLHIYNCRMV*SMSVLD
Trigger: GTCCAGCACCGACATGCTGCAGACCATCCGGCAGTT...GTAAATATGCAGTGAGGTTTGGCAAAATCTATTCCATGTGTGATTTGCTTGTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
CDS-3UTR GCA 90 bp TGCACTCCTCAGTCCTTTGTTAGAGTTCATATTTCTCTCTCTACCTCTCTCTACCCTGAACCAGCAGACTaGACTCCTCAGTCCTTTGTT +
Preference number: 4 (lower is better)
Translates to: CTPQSFVRVHISLSTSLYPEPAD*TPQSFV
Trigger: AACAAAGGACTGAGGAGTGCAGTCTGCTGGTTCAGG...GTAGAGAGAGGTAGAGAGAGAAATATGAACTCTAACAAAGGACTGAGGAGTGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
CDS-3UTR CCA 90 bp CTACAAGCAAATCACACATGGAATAGATTTTGCCAAACCTCACTGCATATTTACAGGCCTATGGGGAGGTaGAAGGTTCGGGGGTTTGCT +
Preference number: 4 (lower is better)
Translates to: LQANHTWNRFCQTSLHIYRPMGR*KVRGFA
Trigger: AGCAAACCCCCGAACCTTCCACCTCCCCATAGGCCT...GTAAATATGCAGTGAGGTTTGGCAAAATCTATTCCATGTGTGATTTGCTTGTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
CDS-3UTR CCA 90 bp AGCAAAACACCACTAAACGTGAACAAGAGAACAGTACATCCGATTTCCAAAGGCAGCCGAGGGCTTGTGTaGAGACTATTAATAGCGGGT +
Preference number: 4 (lower is better)
Translates to: SKTPLNVNKRTVHPISKGSRGLV*RLLIAG
Trigger: ACCCGCTATTAATAGTCTCCACACAAGCCCTCGGCT...GCCTTTGGAAATCGGATGTACTGTTCTCTTGTTCACGTTTAGTGGTGTTTTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
CDS-3UTR CCA 90 bp CTACAAGCAAATCACACATGGAATAGATTTTGCCAAACCTCACTGCATATTTACTCGGTGCTGGACACGTaGCACTCCTTGTTCTCCTGC +
Preference number: 4 (lower is better)
Translates to: LQANHTWNRFCQTSLHIYSVLDT*HSLFSC
Trigger: GCAGGAGAACAAGGAGTGCCACGTGTCCAGCACCGA...GTAAATATGCAGTGAGGTTTGGCAAAATCTATTCCATGTGTGATTTGCTTGTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
CDS-3UTR CCA 90 bp CTACAAGCAAATCACACATGGAATAGATTTTGCCAAACCTCACTGCATATTTACGCAGCATGTCGGTGCTaGACACGTGGCACTCCTTGT +
Preference number: 4 (lower is better)
Translates to: LQANHTWNRFCQTSLHIYAACRC*TRGTPC
Trigger: ACAAGGAGTGCCACGTGTCCAGCACCGACATGCTGC...GTAAATATGCAGTGAGGTTTGGCAAAATCTATTCCATGTGTGATTTGCTTGTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
CDS-3UTR CCA 90 bp CCAGCAGACTGCACTCCTCAGTCCTTTGTTAGAGTTCATATTTCTCTCTCTACCAGATGCACTTGTGCATaGCTTTTTCCAGCACCACAT +
Preference number: 4 (lower is better)
Translates to: PADCTPQSFVRVHISLSTRCTCA*LFPAPH
Trigger: ATGTGGTGCTGGAAAAAGCCATGCACAAGTGCATCT...GGTAGAGAGAGAAATATGAACTCTAACAAAGGACTGAGGAGTGCAGTCTGCTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
3UTR CAA 72 bp AAGAGCCTGAACCAGCAGACTGCACTCCTCAGTCCTTaGTTAGAGTTCATATTTCTCTCTCTACCTCTCTCT +
Preference number: 4 (lower is better)
Translates to: KSLNQQTALLSP*LEFIFLSLPLS
Trigger: AGAGAGAGGTAGAGAGAGAAATATGAACTCTAACAAAGGACTGAGGAGTGCAGTCTGCTGGTTCAGGCTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
CDS-3UTR TCA 90 bp TGCACTCCTCAGTCCTTTGTTAGAGTTCATATTTCTCTCTCTACCTCTCTCTACCTCCGACTTGGCTGTTaGAATGGCATAAGGCAACTT +
Preference number: 4 (lower is better)
Translates to: CTPQSFVRVHISLSTSLYLRLGC*NGIRQL
Trigger: AAGTTGCCTTATGCCATTTCAACAGCCAAGTCGGAG...GTAGAGAGAGGTAGAGAGAGAAATATGAACTCTAACAAAGGACTGAGGAGTGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
CDS-3UTR TCA 90 bp TTCTACAAGCAAATCACACATGGAATAGATTTTGCCAAACCTCACTGCATATTTGAGCCATCGGCCATGTaGAAGTCCTTCAGCATGGCC +
Preference number: 4 (lower is better)
Translates to: FYKQITHGIDFAKPHCIFEPSAM*KSFSMA
Trigger: GGCCATGCTGAAGGACTTTCACATGGCCGATGGCTC...AAATATGCAGTGAGGTTTGGCAAAATCTATTCCATGTGTGATTTGCTTGTAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
CDS-3UTR TCA 90 bp CAATTCTCCATTGCCAAAAGAGAATCCTACTGTTTCACAAACCTCAGCTACCTTCTTGAGTTGCTTCCATaGGCCATCGGCCATGTGAAA +
Preference number: 4 (lower is better)
Translates to: QFSIAKRESYCFTNLSYLLELLP*AIGHVK
Trigger: TTTCACATGGCCGATGGCTCATGGAAGCAACTCAAG...AAGGTAGCTGAGGTTTGTGAAACAGTAGGATTCTCTTTTGGCAATGGAGAATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255006.12
ENST00000440354.2
ENST00000648440.1
CDS-3UTR TCA 90 bp CACAGTACAATAACATGTTTTTGTAACTACCTGTGTTACGTGGATACAAGACCCGCTGCAGGTTCTCCTTaGGTTGCTTCCATGAGCCAT +
Preference number: 4 (lower is better)
Translates to: HSTITCFCNYLCYVDTRPAAGSP*VASMSH
Trigger: ATGGCTCATGGAAGCAACTCAAGGAGAACCTGCAGC...GGGTCTTGTATCCACGTAACACAGGTAGTTACAAAAACATGTTATTGTACTGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
CDS-3UTR TCA 90 bp TGCACTCCTCAGTCCTTTGTTAGAGTTCATATTTCTCTCTCTACCTCTCTCTACACACATCCTCAGTGGTaGTGTAAGGTCTCACAAGGA +
Preference number: 4 (lower is better)
Translates to: CTPQSFVRVHISLSTSLYTHPQW*CKVSQG
Trigger: TCCTTGTGAGACCTTACATCACCACTGAGGATGTGT...GTAGAGAGAGGTAGAGAGAGAAATATGAACTCTAACAAAGGACTGAGGAGTGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
CDS-3UTR GCA 90 bp CACAGTACAATAACATGTTTTTGTAACTACCTGTGTTACGTGGATACAAGACCCAGCACCCGAAGTAGGTaGATTTGTCCCGGGAAAGCT +
Preference number: 4 (lower is better)
Translates to: HSTITCFCNYLCYVDTRPSTRSR*ICPGKA
Trigger: AGCTTTCCCGGGACAAATGCACCTACTTCGGGTGCT...GGGTCTTGTATCCACGTAACACAGGTAGTTACAAAAACATGTTATTGTACTGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
CDS-3UTR GCA 90 bp CTACAAGCAAATCACACATGGAATAGATTTTGCCAAACCTCACTGCATATTTACAGGGTAAGTGTCCTCTaGCAGCTGCTGCCATGTCTC +
Preference number: 4 (lower is better)
Translates to: LQANHTWNRFCQTSLHIYRVSVL*QLLPCL
Trigger: GAGACATGGCAGCAGCTGGCAGAGGACACTTACCCT...GTAAATATGCAGTGAGGTTTGGCAAAATCTATTCCATGTGTGATTTGCTTGTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
CDS-3UTR GCA 90 bp CAATTCTCCATTGCCAAAAGAGAATCCTACTGTTTCACAAACCTCAGCTACCTTAATCACCTGACGCACTaGATCGCAAGCATCTGCTGT +
Preference number: 4 (lower is better)
Translates to: QFSIAKRESYCFTNLSYLNHLTH*IASICC
Trigger: ACAGCAGATGCTTGCGATGCAGTGCGTCAGGTGATT...AAGGTAGCTGAGGTTTGTGAAACAGTAGGATTCTCTTTTGGCAATGGAGAATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255006.12
ENST00000440354.2
ENST00000648440.1
CDS-3UTR CCA 90 bp CACAGTACAATAACATGTTTTTGTAACTACCTGTGTTACGTGGATACAAGACCCTGTCTTACCATGCTGTaGGTTTCAGCGGGTTCCAGG +
Preference number: 4 (lower is better)
Translates to: HSTITCFCNYLCYVDTRPCLTML*VSAGSR
Trigger: CCTGGAACCCGCTGAAACCCACAGCATGGTAAGACA...GGGTCTTGTATCCACGTAACACAGGTAGTTACAAAAACATGTTATTGTACTGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
CDS-3UTR CCA 90 bp ACGTGGATACAAGACCCTCATAGTTTGTGCACCTGCAAACTGGTTTTATTTAACGCTGAGCCTCCGACTTaGCTGTTGAAATGGCATAAG +
Preference number: 4 (lower is better)
Translates to: TWIQDPHSLCTCKLVLFNAEPPT*LLKWHK
Trigger: CTTATGCCATTTCAACAGCCAAGTCGGAGGCTCAGC...GTTAAATAAAACCAGTTTGCAGGTGCACAAACTATGAGGGTCTTGTATCCACGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
CDS-3UTR CCA 90 bp TTGTTAGAGTTCATATTTCTCTCTCTACCTCTCTCTACATTCATTTCTCTCCTTAGGCCTATGGGGAGGTaGAAGGTTCGGGGGTTTGCT +
Preference number: 4 (lower is better)
Translates to: LLEFIFLSLPLSTFISLLRPMGR*KVRGFA
Trigger: AGCAAACCCCCGAACCTTCCACCTCCCCATAGGCCT...AAGGAGAGAAATGAATGTAGAGAGAGGTAGAGAGAGAAATATGAACTCTAACAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
CDS-3UTR CCA 90 bp TTCTACAAGCAAATCACACATGGAATAGATTTTGCCAAACCTCACTGCATATTTTCTGGGTTTCAGTCCTaGCCAGCCGAGGGCTTGTGT +
Preference number: 4 (lower is better)
Translates to: FYKQITHGIDFAKPHCIFSGFQS*PAEGLC
Trigger: ACACAAGCCCTCGGCTGGCCAGGACTGAAACCCAGA...AAATATGCAGTGAGGTTTGGCAAAATCTATTCCATGTGTGATTTGCTTGTAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
CDS-3UTR CCA 90 bp CATCTTTTGAAGAGCCTGAACCAGCAGACTGCACTCCTCAGTCCTTTGTTAGAGTTCCCATGTTTGTTATaGTTGACTGTTTCTGGCATG +
Preference number: 4 (lower is better)
Translates to: HLLKSLNQQTALLSPLLEFPCLL*LTVSGM
Trigger: CATGCCAGAAACAGTCAACCATAACAAACATGGGAA...CTCTAACAAAGGACTGAGGAGTGCAGTCTGCTGGTTCAGGCTCTTCAAAAGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
CDS-3UTR CCA 90 bp CTACAAGCAAATCACACATGGAATAGATTTTGCCAAACCTCACTGCATATTTACTGGAGGGATGGGAGTTaGTTTCGTTCCAGGCAGAGC +
Preference number: 4 (lower is better)
Translates to: LQANHTWNRFCQTSLHIYWRDGS*FRSRQS
Trigger: GCTCTGCCTGGAACGAAACCAACTCCCATCCCTCCA...GTAAATATGCAGTGAGGTTTGGCAAAATCTATTCCATGTGTGATTTGCTTGTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
CDS-3UTR CCA 90 bp CTACAAGCAAATCACACATGGAATAGATTTTGCCAAACCTCACTGCATATTTACCTTCTTCAGCCGGGGTaGAGGGATGGGAGTTGGTTT +
Preference number: 4 (lower is better)
Translates to: LQANHTWNRFCQTSLHIYLLQPG*RDGSWF
Trigger: AAACCAACTCCCATCCCTCCACCCCGGCTGAAGAAG...GTAAATATGCAGTGAGGTTTGGCAAAATCTATTCCATGTGTGATTTGCTTGTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
CDS-3UTR CCA 90 bp TTCTACAAGCAAATCACACATGGAATAGATTTTGCCAAACCTCACTGCATATTTCTCACCTTCTGCAGCTaGGACTTGACGAGCTTGGGC +
Preference number: 4 (lower is better)
Translates to: FYKQITHGIDFAKPHCIFLTFCS*DLTSLG
Trigger: GCCCAAGCTCGTCAAGTCCCAGCTGCAGAAGGTGAG...AAATATGCAGTGAGGTTTGGCAAAATCTATTCCATGTGTGATTTGCTTGTAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
CDS-3UTR CCA 90 bp CACAGTACAATAACATGTTTTTGTAACTACCTGTGTTACGTGGATACAAGACCCGACATAGGTCAGGACTaGCAAGAAGTCATCAGCGCC +
Preference number: 4 (lower is better)
Translates to: HSTITCFCNYLCYVDTRPDIGQD*QEVISA
Trigger: GGCGCTGATGACTTCTTGCCAGTCCTGACCTATGTC...GGGTCTTGTATCCACGTAACACAGGTAGTTACAAAAACATGTTATTGTACTGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
CDS-3UTR TCA 90 bp CGCACTGCATCGCAAGCATCTGCTGTTGAATTCAAAAGAACTTGTATCTTAAGTCCCCGTTCTGGAAAATaGTGCCATAAGGATCGTTCT +
Preference number: 4 (lower is better)
Translates to: RTASQASAVEFKRTCILSPRSGK*CHKDRS
Trigger: AGAACGATCCTTATGGCATCATTTTCCAGAACGGGG...ACTTAAGATACAAGTTCTTTTGAATTCAACAGCAGATGCTTGCGATGCAGTGCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000255006.12
ENST00000440354.2
ENST00000648440.1
CDS-3UTR TCA 90 bp TTGTTAGAGTTCATATTTCTCTCTCTACCTCTCTCTACATTCATTTCTCTCCTTGGAGTGAGAATCACCTaGCGCACTGCATCGCAAGCA +
Preference number: 4 (lower is better)
Translates to: LLEFIFLSLPLSTFISLLGVRIT*RTASQA
Trigger: TGCTTGCGATGCAGTGCGTCAGGTGATTCTCACTCC...AAGGAGAGAAATGAATGTAGAGAGAGGTAGAGAGAGAAATATGAACTCTAACAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
CDS-3UTR GCA 90 bp CTACAAGCAAATCACACATGGAATAGATTTTGCCAAACCTCACTGCATATTTACAGCACCCGAAGTAGGTaGATTTGTCCCGGGAAAGCT +
Preference number: 4 (lower is better)
Translates to: LQANHTWNRFCQTSLHIYSTRSR*ICPGKA
Trigger: AGCTTTCCCGGGACAAATGCACCTACTTCGGGTGCT...GTAAATATGCAGTGAGGTTTGGCAAAATCTATTCCATGTGTGATTTGCTTGTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
CDS-3UTR GCA 90 bp CAATTCTCCATTGCCAAAAGAGAATCCTACTGTTTCACAAACCTCAGCTACCTTGCTGAGCAGTCGCGCTaGTTGTTCTTCTTGGAAATT +
Preference number: 4 (lower is better)
Translates to: QFSIAKRESYCFTNLSYLAEQSR*LFFLEI
Trigger: AATTTCCAAGAAGAACAAGCAGCGCGACTGCTCAGC...AAGGTAGCTGAGGTTTGTGAAACAGTAGGATTCTCTTTTGGCAATGGAGAATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255006.12
ENST00000440354.2
ENST00000648440.1
CDS-3UTR GCA 90 bp ACGTGGATACAAGACCCTCATAGTTTGTGCACCTGCAAACTGGTTTTATTTAACGCTGAGCAGTCGCGCTaGTTGTTCTTCTTGGAAATT +
Preference number: 4 (lower is better)
Translates to: TWIQDPHSLCTCKLVLFNAEQSR*LFFLEI
Trigger: AATTTCCAAGAAGAACAAGCAGCGCGACTGCTCAGC...GTTAAATAAAACCAGTTTGCAGGTGCACAAACTATGAGGGTCTTGTATCCACGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
CDS-3UTR GCA 90 bp TTGTTAGAGTTCATATTTCTCTCTCTACCTCTCTCTACATTCATTTCTCTCCTTGTGGTTCTCCGTTTGTaGCACTGCCTCAGGGTGTCT +
Preference number: 4 (lower is better)
Translates to: LLEFIFLSLPLSTFISLLVVLRL*HCLRVS
Trigger: AGACACCCTGAGGCAGTGGCACAAACGGAGAACCAC...AAGGAGAGAAATGAATGTAGAGAGAGGTAGAGAGAGAAATATGAACTCTAACAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
CDS-3UTR GCA 90 bp TGCACTCCTCAGTCCTTTGTTAGAGTTCATATTTCTCTCTCTACCTCTCTCTACGTTGACCTCCTGAAATaGAACTCGGAGGTAATTCTG +
Preference number: 4 (lower is better)
Translates to: CTPQSFVRVHISLSTSLYVDLLK*NSEVIL
Trigger: CAGAATTACCTCCGAGTTGCATTTCAGGAGGTCAAC...GTAGAGAGAGGTAGAGAGAGAAATATGAACTCTAACAAAGGACTGAGGAGTGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
CDS-3UTR CCA 90 bp CGCACTGCATCGCAAGCATCTGCTGTTGAATTCAAAAGAACTTGTATCTTAAGTAGCACCACATCTATTTaGTCTTCAGGGATCAGCGAC +
Preference number: 4 (lower is better)
Translates to: RTASQASAVEFKRTCILSSTTSI*SSGISD
Trigger: GTCGCTGATCCCTGAAGACCAAATAGATGTGGTGCT...ACTTAAGATACAAGTTCTTTTGAATTCAACAGCAGATGCTTGCGATGCAGTGCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
CDS-3UTR TCA 90 bp CGCACTGCATCGCAAGCATCTGCTGTTGAATTCAAAAGAACTTGTATCTTAAGTATCTTGGTAGATTTATaGACCAGGAAGATCCCCGGA +
Preference number: 4 (lower is better)
Translates to: RTASQASAVEFKRTCILSILVDL*TRKIPG
Trigger: TCCGGGGATCTTCCTGGTTCATAAATCTACCAAGAT...ACTTAAGATACAAGTTCTTTTGAATTCAACAGCAGATGCTTGCGATGCAGTGCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255006.12
ENST00000440354.2
ENST00000648440.1
CDS-3UTR TCA 90 bp CAATTCTCCATTGCCAAAAGAGAATCCTACTGTTTCACAAACCTCAGCTACCTTCATGTTTGTTATGGTTaGCTGTTTCTGGCATGCTCG +
Preference number: 4 (lower is better)
Translates to: QFSIAKRESYCFTNLSYLHVCYG*LFLACS
Trigger: CGAGCATGCCAGAAACAGTCAACCATAACAAACATG...AAGGTAGCTGAGGTTTGTGAAACAGTAGGATTCTCTTTTGGCAATGGAGAATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
CDS-3UTR TCA 90 bp TTCTACAAGCAAATCACACATGGAATAGATTTTGCCAAACCTCACTGCATATTTTGTCACACTGGGCTATaGCATAGGTCAGGACTGGCA +
Preference number: 4 (lower is better)
Translates to: FYKQITHGIDFAKPHCIFCHTGL*HRSGLA
Trigger: TGCCAGTCCTGACCTATGTCATAGCCCAGTGTGACA...AAATATGCAGTGAGGTTTGGCAAAATCTATTCCATGTGTGATTTGCTTGTAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
CDS-3UTR GCA 90 bp TTGTTAGAGTTCATATTTCTCTCTCTACCTCTCTCTACATTCATTTCTCTCCTTTCCAGAAAAGAAGCCTaGTTCTTCAGCCGGGGTGGA +
Preference number: 4 (lower is better)
Translates to: LLEFIFLSLPLSTFISLLSRKEA*FFSRGG
Trigger: TCCACCCCGGCTGAAGAAGCAGGCTTCTTTTCTGGA...AAGGAGAGAAATGAATGTAGAGAGAGGTAGAGAGAGAAATATGAACTCTAACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
CDS-3UTR GCA 90 bp CAATTCTCCATTGCCAAAAGAGAATCCTACTGTTTCACAAACCTCAGCTACCTTTTCAAGATGCACTTGTaGATGGCTTTTTCCAGCACC +
Preference number: 4 (lower is better)
Translates to: QFSIAKRESYCFTNLSYLFKMHL*MAFSST
Trigger: GGTGCTGGAAAAAGCCATGCACAAGTGCATCTTGAA...AAGGTAGCTGAGGTTTGTGAAACAGTAGGATTCTCTTTTGGCAATGGAGAATTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000255006.12
ENST00000440354.2
ENST00000648440.1
CDS-3UTR GCA 90 bp TTGTTAGAGTTCATATTTCTCTCTCTACCTCTCTCTACATTCATTTCTCTCCTTAGGTTCTCCTTGAGTTaGTTCCATGAGCCATCGGCC +
Preference number: 4 (lower is better)
Translates to: LLEFIFLSLPLSTFISLLRFSLS*FHEPSA
Trigger: GGCCGATGGCTCATGGAAGCAACTCAAGGAGAACCT...AAGGAGAGAAATGAATGTAGAGAGAGGTAGAGAGAGAAATATGAACTCTAACAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
CDS-3UTR GCA 90 bp ATGCAATTCTCCATTGCCAAAAGAGAATCCTACTGTTTCACAAACCTCAGCTACGTTGACCTCCTGAAATaGAACTCGGAGGTAATTCTG +
Preference number: 4 (lower is better)
Translates to: MQFSIAKRESYCFTNLSYVDLLK*NSEVIL
Trigger: CAGAATTACCTCCGAGTTGCATTTCAGGAGGTCAAC...GTAGCTGAGGTTTGTGAAACAGTAGGATTCTCTTTTGGCAATGGAGAATTGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255006.12
ENST00000440354.2
ENST00000648440.1
CDS-3UTR GCA 90 bp CGCACTGCATCGCAAGCATCTGCTGTTGAATTCAAAAGAACTTGTATCTTAAGTCTCTCCCCACAAAGTTaGCAAAACATCCAGTTACAG +
Preference number: 4 (lower is better)
Translates to: RTASQASAVEFKRTCILSLSPQS*QNIQLQ
Trigger: CTGTAACTGGATGTTTTGGCAACTTTGTGGGGAGAG...ACTTAAGATACAAGTTCTTTTGAATTCAACAGCAGATGCTTGCGATGCAGTGCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
CDS-3UTR GCA 90 bp CATCTTTTGAAGAGCCTGAACCAGCAGACTGCACTCCTCAGTCCTTTGTTAGAGCATAGTTTGTGCACCTaGAAACTGGTTTTATTTAAC +
Preference number: 4 (lower is better)
Translates to: HLLKSLNQQTALLSPLLEHSLCT*KLVLFN
Trigger: GTTAAATAAAACCAGTTTGCAGGTGCACAAACTATG...CTCTAACAAAGGACTGAGGAGTGCAGTCTGCTGGTTCAGGCTCTTCAAAAGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
CDS-3UTR CCA 90 bp CTACAAGCAAATCACACATGGAATAGATTTTGCCAAACCTCACTGCATATTTACAGCCGAGGGCTTGTGTaGAGACTATTAATAGCGGGT +
Preference number: 4 (lower is better)
Translates to: LQANHTWNRFCQTSLHIYSRGLV*RLLIAG
Trigger: ACCCGCTATTAATAGTCTCCACACAAGCCCTCGGCT...GTAAATATGCAGTGAGGTTTGGCAAAATCTATTCCATGTGTGATTTGCTTGTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
CDS-3UTR TCA 90 bp TGCACTCCTCAGTCCTTTGTTAGAGTTCATATTTCTCTCTCTACCTCTCTCTACCATAAGGATCGTTCTTaGTGCGTTTGTAGACAAAGT +
Preference number: 4 (lower is better)
Translates to: CTPQSFVRVHISLSTSLYHKDRS*CVCRQS
Trigger: ACTTTGTCTACAAACGCATCAAGAACGATCCTTATG...GTAGAGAGAGGTAGAGAGAGAAATATGAACTCTAACAAAGGACTGAGGAGTGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
CDS-3UTR GCA 90 bp CAATTCTCCATTGCCAAAAGAGAATCCTACTGTTTCACAAACCTCAGCTACCTTGGCGAATACATCTTCTaGATGGTCATGAACTTGACT +
Preference number: 4 (lower is better)
Translates to: QFSIAKRESYCFTNLSYLGEYIF*MVMNLT
Trigger: AGTCAAGTTCATGACCATGCAGAAGATGTATTCGCC...AAGGTAGCTGAGGTTTGTGAAACAGTAGGATTCTCTTTTGGCAATGGAGAATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255006.12
ENST00000440354.2
ENST00000648440.1
CDS-3UTR GCA 90 bp TTCTACAAGCAAATCACACATGGAATAGATTTTGCCAAACCTCACTGCATATTTAATCACCTGACGCACTaGATCGCAAGCATCTGCTGT +
Preference number: 4 (lower is better)
Translates to: FYKQITHGIDFAKPHCIFNHLTH*IASICC
Trigger: ACAGCAGATGCTTGCGATGCAGTGCGTCAGGTGATT...AAATATGCAGTGAGGTTTGGCAAAATCTATTCCATGTGTGATTTGCTTGTAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
CDS-3UTR GCA 90 bp ACGTGGATACAAGACCCTCATAGTTTGTGCACCTGCAAACTGGTTTTATTTAACGACCCTCATAGTTTGTaGACCTGCAAACTGGTTTTA +
Preference number: 4 (lower is better)
Translates to: TWIQDPHSLCTCKLVLFNDPHSL*TCKLVL
Trigger: TAAAACCAGTTTGCAGGTGCACAAACTATGAGGGTC...GTTAAATAAAACCAGTTTGCAGGTGCACAAACTATGAGGGTCTTGTATCCACGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
CDS-3UTR GCA 90 bp CACAGTACAATAACATGTTTTTGTAACTACCTGTGTTACGTGGATACAAGACCCCAAACATTTGGGAGCTaGCAAGCCCTTTCAACAACA +
Preference number: 4 (lower is better)
Translates to: HSTITCFCNYLCYVDTRPQTFGS*QALSTT
Trigger: TGTTGTTGAAAGGGCTTGGCAGCTCCCAAATGTTTG...GGGTCTTGTATCCACGTAACACAGGTAGTTACAAAAACATGTTATTGTACTGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000648440.1
CDS-3UTR CCA 90 bp ACGTGGATACAAGACCCTCATAGTTTGTGCACCTGCAAACTGGTTTTATTTAACACTACCTGTGTTACGTaGATACAAGACCCTCATAGT +
Preference number: 4 (lower is better)
Translates to: TWIQDPHSLCTCKLVLFNTTCVT*IQDPHS
Trigger: ACTATGAGGGTCTTGTATCCACGTAACACAGGTAGT...GTTAAATAAAACCAGTTTGCAGGTGCACAAACTATGAGGGTCTTGTATCCACGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
CDS-3UTR TCA 90 bp CTACAAGCAAATCACACATGGAATAGATTTTGCCAAACCTCACTGCATATTTACTGCAGTAGAAAGCAATaGGCCGGAATAAATCTGCGA +
Preference number: 4 (lower is better)
Translates to: LQANHTWNRFCQTSLHIYCSRKQ*AGINLR
Trigger: TCGCAGATTTATTCCGGCTCATTGCTTTCTACTGCA...GTAAATATGCAGTGAGGTTTGGCAAAATCTATTCCATGTGTGATTTGCTTGTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
CDS-3UTR TCA 90 bp ATGCAATTCTCCATTGCCAAAAGAGAATCCTACTGTTTCACAAACCTCAGCTACCATAAGGATCGTTCTTaGTGCGTTTGTAGACAAAGT +
Preference number: 4 (lower is better)
Translates to: MQFSIAKRESYCFTNLSYHKDRS*CVCRQS
Trigger: ACTTTGTCTACAAACGCATCAAGAACGATCCTTATG...GTAGCTGAGGTTTGTGAAACAGTAGGATTCTCTTTTGGCAATGGAGAATTGCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255006.12
ENST00000440354.2
ENST00000648440.1
CDS-3UTR GCA 90 bp TGCACTCCTCAGTCCTTTGTTAGAGTTCATATTTCTCTCTCTACCTCTCTCTACGGGAAAAGGTGTATGTaGTTTCCTTTATGGCAAATT +
Preference number: 4 (lower is better)
Translates to: CTPQSFVRVHISLSTSLYGKRCM*FPLWQI
Trigger: AATTTGCCATAAAGGAAAGCACATACACCTTTTCCC...GTAGAGAGAGGTAGAGAGAGAAATATGAACTCTAACAAAGGACTGAGGAGTGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
CDS-3UTR GCA 90 bp TTGTTAGAGTTCATATTTCTCTCTCTACCTCTCTCTACATTCATTTCTCTCCTTGCAGCACGAAGGAGCTaGTCCTTTTCTTTTTGGACT +
Preference number: 4 (lower is better)
Translates to: LLEFIFLSLPLSTFISLLAARRS*SFSFWT
Trigger: AGTCCAAAAAGAAAAGGAGCAGCTCCTTCGTGCTGC...AAGGAGAGAAATGAATGTAGAGAGAGGTAGAGAGAGAAATATGAACTCTAACAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
CDS-3UTR GCA 90 bp CAATTCTCCATTGCCAAAAGAGAATCCTACTGTTTCACAAACCTCAGCTACCTTCTTTATCAGAGAAAGTaGTCCATATGCGCTTGTCAA +
Preference number: 4 (lower is better)
Translates to: QFSIAKRESYCFTNLSYLLYQRK*SICACQ
Trigger: TTGACAAGCGCATATGGAGCACTTTCTCTGATAAAG...AAGGTAGCTGAGGTTTGTGAAACAGTAGGATTCTCTTTTGGCAATGGAGAATTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255006.12
ENST00000440354.2
ENST00000648440.1
CDS-3UTR CCA 90 bp TTGTTAGAGTTCATATTTCTCTCTCTACCTCTCTCTACATTCATTTCTCTCCTTATGGTTGACTGTTTCTaGCATGCTCGTCTGGGTTTC +
Preference number: 4 (lower is better)
Translates to: LLEFIFLSLPLSTFISLLMVDCF*HARLGF
Trigger: GAAACCCAGACGAGCATGCCAGAAACAGTCAACCAT...AAGGAGAGAAATGAATGTAGAGAGAGGTAGAGAGAGAAATATGAACTCTAACAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
CDS-3UTR CCA 90 bp ACGTGGATACAAGACCCTCATAGTTTGTGCACCTGCAAACTGGTTTTATTTAACTTCCCATGTTTGTTATaGTTGACTGTTTCTGGCATG +
Preference number: 4 (lower is better)
Translates to: TWIQDPHSLCTCKLVLFNFPCLL*LTVSGM
Trigger: CATGCCAGAAACAGTCAACCATAACAAACATGGGAA...GTTAAATAAAACCAGTTTGCAGGTGCACAAACTATGAGGGTCTTGTATCCACGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
CDS-3UTR GCA 90 bp CACAGTACAATAACATGTTTTTGTAACTACCTGTGTTACGTGGATACAAGACCCCTTTATCAGAGAAAGTaGTCCATATGCGCTTGTCAA +
Preference number: 4 (lower is better)
Translates to: HSTITCFCNYLCYVDTRPLYQRK*SICACQ
Trigger: TTGACAAGCGCATATGGAGCACTTTCTCTGATAAAG...GGGTCTTGTATCCACGTAACACAGGTAGTTACAAAAACATGTTATTGTACTGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
CDS-3UTR GCA 90 bp TGCACTCCTCAGTCCTTTGTTAGAGTTCATATTTCTCTCTCTACCTCTCTCTACCATAGTTTGTGCACCTaGAAACTGGTTTTATTTAAC +
Preference number: 4 (lower is better)
Translates to: CTPQSFVRVHISLSTSLYHSLCT*KLVLFN
Trigger: GTTAAATAAAACCAGTTTGCAGGTGCACAAACTATG...GTAGAGAGAGGTAGAGAGAGAAATATGAACTCTAACAAAGGACTGAGGAGTGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
3UTR CAA 72 bp ACTACCTGTGTTACGTGGATACAAGACCCTCATAGTTaGTGCACCTGCAAACTGGTTTTATTTAACATAAGT +
Preference number: 4 (lower is better)
Translates to: TTCVTWIQDPHS*CTCKLVLFNIS
Trigger: ACTTATGTTAAATAAAACCAGTTTGCAGGTGCACAAACTATGAGGGTCTTGTATCCACGTAACACAGGTAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
CDS-3UTR TCA 90 bp TTCTACAAGCAAATCACACATGGAATAGATTTTGCCAAACCTCACTGCATATTTGGTAAAGTGGATTCTTaGGAAAATGAGTCCAACATG +
Preference number: 4 (lower is better)
Translates to: FYKQITHGIDFAKPHCIFGKVDS*ENESNM
Trigger: CATGTTGGACTCATTTTCTCAAGAATCCACTTTACC...AAATATGCAGTGAGGTTTGGCAAAATCTATTCCATGTGTGATTTGCTTGTAGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648440.1
CDS-3UTR GCA 90 bp TTGTTAGAGTTCATATTTCTCTCTCTACCTCTCTCTACATTCATTTCTCTCCTTGTGTCAGGAATACGTTaGTTTAAGAAATCCAGCAGT +
Preference number: 4 (lower is better)
Translates to: LLEFIFLSLPLSTFISLLVSGIR*FKKSSS
Trigger: ACTGCTGGATTTCTTAAAGCAACGTATTCCTGACAC...AAGGAGAGAAATGAATGTAGAGAGAGGTAGAGAGAGAAATATGAACTCTAACAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
CDS-3UTR GCA 90 bp TTGTTAGAGTTCATATTTCTCTCTCTACCTCTCTCTACATTCATTTCTCTCCTTCTGGTTTTGATAGAATaGACTCCATTTATAAGGCAG +
Preference number: 4 (lower is better)
Translates to: LLEFIFLSLPLSTFISLLLVLIE*TPFIRQ
Trigger: CTGCCTTATAAATGGAGTGCATTCTATCAAAACCAG...AAGGAGAGAAATGAATGTAGAGAGAGGTAGAGAGAGAAATATGAACTCTAACAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
CDS GCA 90 bp GGCCCCACCTGGGCTGCCAGCTGTGCCCAGCTCCAGCTCCGGGCCTaGGCCCGGCCGGCCGCCGCTCAAGGTCTTTGCACCGCCCTCTGC +
Preference number: 5 (lower is better)
Translates to: GPTWAASCAQLQLRA*ARPAAAQGLCTALC
Trigger: GCAGAGGGCGGTGCAAAGACCTTGAGCGGCGGCCGGCCGGGCGCAGGCCCGGAGCTGGAGCTGGGCACAGCTGGCAGCCCAGGTGGGGCC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255006.12
ENST00000484638.1
ENST00000648440.1
CDS GCA 90 bp CTCCAGCTCCGGGCCTGCGCCCGGCCGGCCGCCGCTCAAGGTCTTTaGACCGCCCTCTGCTTCCAGAAAAGAAGCCTGCTTCTTCAGCCG +
Preference number: 5 (lower is better)
Translates to: LQLRACARPAAAQGL*TALCFQKRSLLLQP
Trigger: CGGCTGAAGAAGCAGGCTTCTTTTCTGGAAGCAGAGGGCGGTGCAAAGACCTTGAGCGGCGGCCGGCCGGGCGCAGGCCCGGAGCTGGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255006.12
ENST00000484638.1
ENST00000648440.1
CDS GCA 90 bp GCCTGCGCCCGGCCGGCCGCCGCTCAAGGTCTTTGCACCGCCCTCTaGTTCCAGAAAAGAAGCCTGCTTCTTCAGCCGGGGTGGAGGGAT +
Preference number: 5 (lower is better)
Translates to: ACARPAAAQGLCTAL*FQKRSLLLQPGWRD
Trigger: ATCCCTCCACCCCGGCTGAAGAAGCAGGCTTCTTTTCTGGAAGCAGAGGGCGGTGCAAAGACCTTGAGCGGCGGCCGGCCGGGCGCAGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255006.12
ENST00000484638.1
ENST00000648440.1
CDS-3UTR CAA 90 bp GCCGAGTTGGCCTGTGGATGGCTTAGTCACTACACTGAGGGGTCCCCGAGGAGGAAGCACAGGGCCCCGTaGGTCTGGCTGCACTCCAGC +
Preference number: 5 (lower is better)
Translates to: AELACGWLSHYTEGSPRRKHRAP*VWLHSS
Trigger: GCTGGAGTGCAGCCAGACCAACGGGGCCCTGTGCTT...CCTCCTCGGGGACCCCTCAGTGTAGTGACTAAGCCATCCACAGGCCAACTCGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
CDS TCA 90 bp GCTGCAGCCATATGGGGTGGGTGTGGAGGAGCCGGTCCAAGATGCTaGGCCTGTTGGAGAGGCTGTCATAGCCTGAGTCCCGGGCACAGG +
Preference number: 5 (lower is better)
Translates to: AAAIWGGCGGAGPRC*ACWRGCHSLSPGHR
Trigger: CCTGTGCCCGGGACTCAGGCTATGACAGCCTCTCCAACAGGCTCAGCATCTTGGACCGGCTCCTCCACACCCACCCCATATGGCTGCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000255006.12
ENST00000440354.2
ENST00000459721.5
ENST00000467569.5
ENST00000484638.1
ENST00000648440.1
CDS CCA 90 bp TTAGCCGGTGCTGGCTCAGAGAGCAGACTTCCCTCAGCAGCTCCATaGAGCACCGCAGCTCCCAGGCTCAGGCAGCAAGCCGACGAGTTG +
Preference number: 5 (lower is better)
Translates to: LAGAGSESRLPSAAP*STAAPRLRQQADEL
Trigger: CAACTCGTCGGCTTGCTGCCTGAGCCTGGGAGCTGCGGTGCTCCATGGAGCTGCTGAGGGAAGTCTGCTCTCTGAGCCAGCACCGGCTAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000432334.2
ENST00000648165.1
CDS-3UTR CAA 90 bp GCCGAGTTGGCCTGTGGATGGCTTAGTCACTACACTGAGGGGTCCCCGAGGAGGGGAAGGTTCGGGGGTTaGCTGTCAGCTGGGGAGCTC +
Preference number: 5 (lower is better)
Translates to: AELACGWLSHYTEGSPRRGRFGG*LSAGEL
Trigger: GAGCTCCCCAGCTGACAGCAAACCCCCGAACCTTCC...CCTCCTCGGGGACCCCTCAGTGTAGTGACTAAGCCATCCACAGGCCAACTCGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
CDS GCA 90 bp ATGAACCAGGAAGATCCCCGGAGGCTGGGCCTGCAGGACCTCTGCTaGCTCCTCCTCACTCAGACTCAGCTGCAGCCATATGGGGTGGGT +
Preference number: 5 (lower is better)
Translates to: MNQEDPRRLGLQDLC*LLLTQTQLQPYGVG
Trigger: ACCCACCCCATATGGCTGCAGCTGAGTCTGAGTGAGGAGGAGGCAGCAGAGGTCCTGCAGGCCCAGCCTCCGGGGATCTTCCTGGTTCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000255006.12
ENST00000440354.2
ENST00000467569.5
ENST00000484638.1
ENST00000648440.1
CDS GCA 90 bp CGCTTCTCCGGGGTCATGAAGGAGCTGAACACCCCGCTCACCTTCTaGAGCTGGGACTTGACGAGCTTGGGCAGCACGAAGGAGCTGCTC +
Preference number: 5 (lower is better)
Translates to: RFSGVMKELNTPLTF*SWDLTSLGSTKELL
Trigger: GAGCAGCTCCTTCGTGCTGCCCAAGCTCGTCAAGTCCCAGCTGCAGAAGGTGAGCGGGGTGTTCAGCTCCTTCATGACCCCGGAGAAGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255006.12
ENST00000484638.1
ENST00000648440.1
CDS CCA 90 bp GTAACAATCAGCAGCTGGGCTCGGGCAAGCTCCCTTAGCCGGTGCTaGCTCAGAGAGCAGACTTCCCTCAGCAGCTCCATGGAGCACCGC +
Preference number: 5 (lower is better)
Translates to: VTISSWARASSLSRC*LREQTSLSSSMEHR
Trigger: GCGGTGCTCCATGGAGCTGCTGAGGGAAGTCTGCTCTCTGAGCCAGCACCGGCTAAGGGAGCTTGCCCGAGCCCAGCTGCTGATTGTTAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000432334.2
ENST00000648165.1
CDS-3UTR CAA 90 bp TGCCCTTGGCCGAGTTGGCCTGTGGATGGCTTAGTCACTACACTGAGGGGTCCCAAGAAACTTCCTCGCTaGTCCAGACCGCGGGCGCCC +
Preference number: 5 (lower is better)
Translates to: CPWPSWPVDGLVTTLRGPKKLPR*SRPRAP
Trigger: GGGCGCCCGCGGTCTGGACAAGCGAGGAAGTTTCTT...GGGACCCCTCAGTGTAGTGACTAAGCCATCCACAGGCCAACTCGGCCAAGGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255006.12
ENST00000440354.2
ENST00000648440.1
CDS-3UTR CAA 90 bp TGCCCTTGGCCGAGTTGGCCTGTGGATGGCTTAGTCACTACACTGAGGGGTCCCTCGCGTTGGGAGTCCTaGTGCTCGGCCGTTTCAGGC +
Preference number: 5 (lower is better)
Translates to: CPWPSWPVDGLVTTLRGPSRWES*CSAVSG
Trigger: GCCTGAAACGGCCGAGCACAAGGACTCCCAACGCGA...GGGACCCCTCAGTGTAGTGACTAAGCCATCCACAGGCCAACTCGGCCAAGGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
CDS-3UTR CAA 90 bp GCCGAGTTGGCCTGTGGATGGCTTAGTCACTACACTGAGGGGTCCCCGAGGAGGTTCTGCAGCTGGGACTaGACGAGCTTGGGCAGCACG +
Preference number: 5 (lower is better)
Translates to: AELACGWLSHYTEGSPRRFCSWD*TSLGST
Trigger: CGTGCTGCCCAAGCTCGTCAAGTCCCAGCTGCAGAA...CCTCCTCGGGGACCCCTCAGTGTAGTGACTAAGCCATCCACAGGCCAACTCGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
CDS GCA 90 bp GCGCCATGGTCTCTTGGTCACTTTCCCCCTCGTAGTCCTCCAGGCTaGTGTTGGTGTCCGCCTCGTAGCCAAACAGAGGCATGCTCCGGT +
Preference number: 5 (lower is better)
Translates to: APWSLGHFPPRSPPG*CWCPPRSQTEACSG
Trigger: ACCGGAGCATGCCTCTGTTTGGCTACGAGGCGGACACCAACAGCAGCCTGGAGGACTACGAGGGGGAAAGTGACCAAGAGACCATGGCGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000255006.12
ENST00000484638.1
ENST00000648440.1
CDS GCA 90 bp CTGGTAACAATCAGCAGCTGGGCTCGGGCAAGCTCCCTTAGCCGGTaGTGGCTCAGAGAGCAGACTTCCCTCAGCAGCTCCATGGAGCAC +
Preference number: 5 (lower is better)
Translates to: LVTISSWARASSLSR*WLREQTSLSSSMEH
Trigger: GTGCTCCATGGAGCTGCTGAGGGAAGTCTGCTCTCTGAGCCAGCACCGGCTAAGGGAGCTTGCCCGAGCCCAGCTGCTGATTGTTACCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000432334.2
ENST00000648165.1
CDS-3UTR CAA 90 bp CAAGCATGTAGAAGCGGGAAGGCAAGGCTTCCAGCTCCCCTTTGGATGCACCACAAGCACAGGGCCCCGTaGGTCTGGCTGCACTCCAGC +
Preference number: 5 (lower is better)
Translates to: QACRSGKARLPAPLWMHHKHRAP*VWLHSS
Trigger: GCTGGAGTGCAGCCAGACCAACGGGGCCCTGTGCTT...GTGGTGCATCCAAAGGGGAGCTGGAAGCCTTGCCTTCCCGCTTCTACATGCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
CDS-3UTR CAA 90 bp GCCGAGTTGGCCTGTGGATGGCTTAGTCACTACACTGAGGGGTCCCCGAGGAGGTCAGGGTCCCCCACCTaGAACTTCTCAGCGCAGATC +
Preference number: 5 (lower is better)
Translates to: AELACGWLSHYTEGSPRRSGSPT*NFSAQI
Trigger: GATCTGCGCTGAGAAGTTCAAGGTGGGGGACCCTGA...CCTCCTCGGGGACCCCTCAGTGTAGTGACTAAGCCATCCACAGGCCAACTCGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000255006.12
ENST00000440354.2
ENST00000648440.1
CDS TCA 90 bp GAGCCGGTCCAAGATGCTGAGCCTGTTGGAGAGGCTGTCATAGCCTaGGTCCCGGGCACAGGTCTTCACGTCCTCTTCCTCGGAATAGCC +
Preference number: 5 (lower is better)
Translates to: EPVQDAEPVGEAVIA*VPGTGLHVLFLGIA
Trigger: GGCTATTCCGAGGAAGAGGACGTGAAGACCTGTGCCCGGGACTCAGGCTATGACAGCCTCTCCAACAGGCTCAGCATCTTGGACCGGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000255006.12
ENST00000440354.2
ENST00000459721.5
ENST00000467569.5
ENST00000484638.1
ENST00000648440.1
CDS GCA 90 bp CCTGCAGGAAGCTCACGTAGTCCTGCACTAAGCACCCGAAGTAGGTaGATTTGTCCCGGGAAAGCTCGGCGATCCTGCGGACCATCCGCT +
Preference number: 5 (lower is better)
Translates to: PAGSSRSPALSTRSR*ICPGKARRSCGPSA
Trigger: AGCGGATGGTCCGCAGGATCGCCGAGCTTTCCCGGGACAAATGCACCTACTTCGGGTGCTTAGTGCAGGACTACGTGAGCTTCCTGCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255006.12
ENST00000484638.1
ENST00000648440.1
CDS GCA 90 bp TCCACAGAGGGGATGGTCCGGTTGGTGGTTCTCCGTTTGTGCCACTaGCTCAGGGTGTCTCTGGTTTCTGAGCTGAGCAGTCGCGCTGCT +
Preference number: 5 (lower is better)
Translates to: STEGMVRLVVLRLCH*LRVSLVSELSSRAA
Trigger: AGCAGCGCGACTGCTCAGCTCAGAAACCAGAGACACCCTGAGGCAGTGGCACAAACGGAGAACCACCAACCGGACCATCCCCTCTGTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255006.12
ENST00000440354.2
ENST00000484638.1
ENST00000648440.1
CDS GCA 90 bp CTTCTGCCCCAGCCCTTCACGCCAGCATCTCTTCTCCTCTCCCACTaGAGTTCAGCCCAACCTCCCCAGCGTTCTGAAGGGCTTGCACAT +
Preference number: 5 (lower is better)
Translates to: LLPQPFTPASLLLSH*SSAQPPQRSEGLAH
Trigger: ATGTGCAAGCCCTTCAGAACGCTGGGGAGGTTGGGCTGAACTGCAGTGGGAGAGGAGAAGAGATGCTGGCGTGAAGGGCTGGGGCAGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000412571.1
ENST00000426012.1
CDS-3UTR CAA 90 bp AGCTACCTTGCGTGGCTAAAGTTGCCCTTGGCCGAGTTGGCCTGTGGATGGCTTCGCCGCTCAAGGTCTTaGCACCGCCCTCTGCTTCCA +
Preference number: 5 (lower is better)
Translates to: SYLAWLKLPLAELACGWLRRSRS*HRPLLP
Trigger: TGGAAGCAGAGGGCGGTGCAAAGACCTTGAGCGGCG...AAGCCATCCACAGGCCAACTCGGCCAAGGGCAACTTTAGCCACGCAAGGTAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
CDS-3UTR CAA 90 bp TGCCCTTGGCCGAGTTGGCCTGTGGATGGCTTAGTCACTACACTGAGGGGTCCCTGGCTAAAGTTGCCCTaGGCCGAGTTGGCCTGTGGA +
Preference number: 5 (lower is better)
Translates to: CPWPSWPVDGLVTTLRGPWLKLP*AELACG
Trigger: TCCACAGGCCAACTCGGCCAAGGGCAACTTTAGCCA...GGGACCCCTCAGTGTAGTGACTAAGCCATCCACAGGCCAACTCGGCCAAGGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255006.12
ENST00000440354.2
ENST00000648440.1
CDS GCA 90 bp AAGTCGTCCACAGAGGGGATGGTCCGGTTGGTGGTTCTCCGTTTGTaGCACTGCCTCAGGGTGTCTCTGGTTTCTGAGCTGAGCAGTCGC +
Preference number: 5 (lower is better)
Translates to: KSSTEGMVRLVVLRL*HCLRVSLVSELSSR
Trigger: GCGACTGCTCAGCTCAGAAACCAGAGACACCCTGAGGCAGTGGCACAAACGGAGAACCACCAACCGGACCATCCCCTCTGTGGACGACTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255006.12
ENST00000440354.2
ENST00000484638.1
ENST00000648440.1
CDS CCA 90 bp ACCGCCCTCTGCTTCCAGAAAAGAAGCCTGCTTCTTCAGCCGGGGTaGAGGGATGGGAGTTGGTTTCGTTCCAGGCAGAGCTACGTTCCC +
Preference number: 5 (lower is better)
Translates to: TALCFQKRSLLLQPG*RDGSWFRSRQSYVP
Trigger: GGGAACGTAGCTCTGCCTGGAACGAAACCAACTCCCATCCCTCCACCCCGGCTGAAGAAGCAGGCTTCTTTTCTGGAAGCAGAGGGCGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255006.12
ENST00000484638.1
ENST00000648440.1
CDS CCA 90 bp TGGTCTCTTGGTCACTTTCCCCCTCGTAGTCCTCCAGGCTGCTGTTaGTGTCCGCCTCGTAGCCAAACAGAGGCATGCTCCGGTCGAACT +
Preference number: 5 (lower is better)
Translates to: WSLGHFPPRSPPGCC*CPPRSQTEACSGRT
Trigger: AGTTCGACCGGAGCATGCCTCTGTTTGGCTACGAGGCGGACACCAACAGCAGCCTGGAGGACTACGAGGGGGAAAGTGACCAAGAGACCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000255006.12
ENST00000484638.1
ENST00000648440.1
CDS-3UTR CAA 90 bp CTGCTTTTCAAGCTCAAGCATGTAGAAGCGGGAAGGCAAGGCTTCCAGCTCCCCGCCTCCACGTGCCCCTaGAGGGGCTTCAAGATGCAC +
Preference number: 5 (lower is better)
Translates to: LLFKLKHVEAGRQGFQLPASTCP*RGFKMH
Trigger: GTGCATCTTGAAGCCCCTCAAGGGGCACGTGGAGGC...GGGGAGCTGGAAGCCTTGCCTTCCCGCTTCTACATGCTTGAGCTTGAAAAGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000255006.12
ENST00000440354.2
ENST00000648440.1
CDS-3UTR CAA 90 bp GTCCCCGAGGAGGTGACTGCTTTTCAAGCTCAAGCATGTAGAAGCGGGAAGGCAGCCTCCACGTGCCCCTaGAGGGGCTTCAAGATGCAC +
Preference number: 5 (lower is better)
Translates to: VPEEVTAFQAQACRSGKAASTCP*RGFKMH
Trigger: GTGCATCTTGAAGCCCCTCAAGGGGCACGTGGAGGC...TGCCTTCCCGCTTCTACATGCTTGAGCTTGAAAAGCAGTCACCTCCTCGGGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000255006.12
ENST00000440354.2
ENST00000648440.1
CDS-3UTR CAA 90 bp CAAGCATGTAGAAGCGGGAAGGCAAGGCTTCCAGCTCCCCTTTGGATGCACCACGAGGGGATGGTCCGGTaGGTGGTTCTCCGTTTGTGC +
Preference number: 5 (lower is better)
Translates to: QACRSGKARLPAPLWMHHEGMVR*VVLRLC
Trigger: GCACAAACGGAGAACCACCAACCGGACCATCCCCTC...GTGGTGCATCCAAAGGGGAGCTGGAAGCCTTGCCTTCCCGCTTCTACATGCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255006.12
ENST00000440354.2
ENST00000648440.1
CDS-3UTR CAA 90 bp AGTTGGCCTGTGGATGGCTTAGTCACTACACTGAGGGGTCCCCGAGGAGGTGACGCTTCCAGCTCCCCTTaGGATGCACCACTGGGAAGT +
Preference number: 5 (lower is better)
Translates to: SWPVDGLVTTLRGPRGGDASSSP*DAPLGS
Trigger: ACTTCCCAGTGGTGCATCCAAAGGGGAGCTGGAAGC...GTCACCTCCTCGGGGACCCCTCAGTGTAGTGACTAAGCCATCCACAGGCCAACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000255006.12
ENST00000440354.2
ENST00000648440.1
CDS-3UTR CAA 90 bp CAAGCATGTAGAAGCGGGAAGGCAAGGCTTCCAGCTCCCCTTTGGATGCACCACCTTGCGTGGCTAAAGTaGCCCTTGGCCGAGTTGGCC +
Preference number: 5 (lower is better)
Translates to: QACRSGKARLPAPLWMHHLAWLK*PLAELA
Trigger: GGCCAACTCGGCCAAGGGCAACTTTAGCCACGCAAG...GTGGTGCATCCAAAGGGGAGCTGGAAGCCTTGCCTTCCCGCTTCTACATGCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255006.12
ENST00000440354.2
ENST00000648440.1
CDS-3UTR CAA 90 bp GCCGAGTTGGCCTGTGGATGGCTTAGTCACTACACTGAGGGGTCCCCGAGGAGGCGGGGACTCCGTAGTTaGAGAGGCTGTGAAATTCCT +
Preference number: 5 (lower is better)
Translates to: AELACGWLSHYTEGSPRRRGLRS*RGCEIP
Trigger: AGGAATTTCACAGCCTCTCAAACTACGGAGTCCCCG...CCTCCTCGGGGACCCCTCAGTGTAGTGACTAAGCCATCCACAGGCCAACTCGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000648440.1
CDS TCA 90 bp AGCTGCAGGTTCTCCTTGAGTTGCTTCCATGAGCCATCGGCCATGTaGAAGTCCTTCAGCATGGCCTCCACGTGCCCCTTGAGGGGCTTC +
Preference number: 5 (lower is better)
Translates to: SCRFSLSCFHEPSAM*KSFSMASTCPLRGF
Trigger: GAAGCCCCTCAAGGGGCACGTGGAGGCCATGCTGAAGGACTTTCACATGGCCGATGGCTCATGGAAGCAACTCAAGGAGAACCTGCAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000255006.12
ENST00000440354.2
ENST00000484638.1
ENST00000648440.1
CDS-3UTR CAA 90 bp CAAGCATGTAGAAGCGGGAAGGCAAGGCTTCCAGCTCCCCTTTGGATGCACCACGACACGTGGCACTCCTaGTTCTCCTGCAGGAAGCTC +
Preference number: 5 (lower is better)
Translates to: QACRSGKARLPAPLWMHHDTWHS*FSCRKL
Trigger: GAGCTTCCTGCAGGAGAACAAGGAGTGCCACGTGTC...GTGGTGCATCCAAAGGGGAGCTGGAAGCCTTGCCTTCCCGCTTCTACATGCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
CDS-3UTR CAA 90 bp CTGCTTTTCAAGCTCAAGCATGTAGAAGCGGGAAGGCAAGGCTTCCAGCTCCCCGAGGGGATGGTCCGGTaGGTGGTTCTCCGTTTGTGC +
Preference number: 5 (lower is better)
Translates to: LLFKLKHVEAGRQGFQLPEGMVR*VVLRLC
Trigger: GCACAAACGGAGAACCACCAACCGGACCATCCCCTC...GGGGAGCTGGAAGCCTTGCCTTCCCGCTTCTACATGCTTGAGCTTGAAAAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000255006.12
ENST00000440354.2
ENST00000648440.1
CDS-3UTR CAA 90 bp AGTTGCCCTTGGCCGAGTTGGCCTGTGGATGGCTTAGTCACTACACTGAGGGGTTGGCTAAAGTTGCCCTaGGCCGAGTTGGCCTGTGGA +
Preference number: 5 (lower is better)
Translates to: SCPWPSWPVDGLVTTLRGWLKLP*AELACG
Trigger: TCCACAGGCCAACTCGGCCAAGGGCAACTTTAGCCA...ACCCCTCAGTGTAGTGACTAAGCCATCCACAGGCCAACTCGGCCAAGGGCAACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255006.12
ENST00000440354.2
ENST00000648440.1
CDS-3UTR CAA 90 bp GTCCCCGAGGAGGTGACTGCTTTTCAAGCTCAAGCATGTAGAAGCGGGAAGGCACTTGCGTGGCTAAAGTaGCCCTTGGCCGAGTTGGCC +
Preference number: 5 (lower is better)
Translates to: VPEEVTAFQAQACRSGKALAWLK*PLAELA
Trigger: GGCCAACTCGGCCAAGGGCAACTTTAGCCACGCAAG...TGCCTTCCCGCTTCTACATGCTTGAGCTTGAAAAGCAGTCACCTCCTCGGGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255006.12
ENST00000440354.2
ENST00000648440.1
CDS TCA 90 bp CCAGCTCCTGCGGATTCCTCTGCCGCACAAGCTGCAGGTTCTCCTTaGGTTGCTTCCATGAGCCATCGGCCATGTGAAAGTCCTTCAGCA +
Preference number: 5 (lower is better)
Translates to: PAPADSSAAQAAGSP*VASMSHRPCESPSA
Trigger: TGCTGAAGGACTTTCACATGGCCGATGGCTCATGGAAGCAACTCAAGGAGAACCTGCAGCTTGTGCGGCAGAGGAATCCGCAGGAGCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255006.12
ENST00000440354.2
ENST00000484638.1
ENST00000648440.1
CDS GCA 90 bp CAGCAATCAATCCCCTTCACGCCAGCATCTCTTCTCCTCTCCCACTaGAGTTCAGCCCAACCTCCCCAGCGTTCTGAAGGGCTTGCACAT +
Preference number: 5 (lower is better)
Translates to: QQSIPFTPASLLLSH*SSAQPPQRSEGLAH
Trigger: ATGTGCAAGCCCTTCAGAACGCTGGGGAGGTTGGGCTGAACTGCAGTGGGAGAGGAGAAGAGATGCTGGCGTGAAGGGGATTGATTGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648165.1
CDS-3UTR CAA 90 bp CTAAAGTTGCCCTTGGCCGAGTTGGCCTGTGGATGGCTTAGTCACTACACTGAGTGGGACTTGACGAGCTaGGGCAGCACGAAGGAGCTG +
Preference number: 5 (lower is better)
Translates to: LKLPLAELACGWLSHYTEWDLTS*GSTKEL
Trigger: CAGCTCCTTCGTGCTGCCCAAGCTCGTCAAGTCCCA...CTCAGTGTAGTGACTAAGCCATCCACAGGCCAACTCGGCCAAGGGCAACTTTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
CDS-3UTR CAA 90 bp CTAAAGTTGCCCTTGGCCGAGTTGGCCTGTGGATGGCTTAGTCACTACACTGAGGAGGGGATGGTCCGGTaGGTGGTTCTCCGTTTGTGC +
Preference number: 5 (lower is better)
Translates to: LKLPLAELACGWLSHYTEEGMVR*VVLRLC
Trigger: GCACAAACGGAGAACCACCAACCGGACCATCCCCTC...CTCAGTGTAGTGACTAAGCCATCCACAGGCCAACTCGGCCAAGGGCAACTTTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255006.12
ENST00000440354.2
ENST00000648440.1
CDS-3UTR CAA 90 bp GTCCCCGAGGAGGTGACTGCTTTTCAAGCTCAAGCATGTAGAAGCGGGAAGGCATCAGGGTCCCCCACCTaGAACTTCTCAGCGCAGATC +
Preference number: 5 (lower is better)
Translates to: VPEEVTAFQAQACRSGKASGSPT*NFSAQI
Trigger: GATCTGCGCTGAGAAGTTCAAGGTGGGGGACCCTGA...TGCCTTCCCGCTTCTACATGCTTGAGCTTGAAAAGCAGTCACCTCCTCGGGGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000255006.12
ENST00000440354.2
ENST00000648440.1
CDS-3UTR CAA 90 bp GTCCCCGAGGAGGTGACTGCTTTTCAAGCTCAAGCATGTAGAAGCGGGAAGGCATTGCCCTTGGCCGAGTaGGCCTGTGGATGGCTTAGT +
Preference number: 5 (lower is better)
Translates to: VPEEVTAFQAQACRSGKALPLAE*ACGWLS
Trigger: ACTAAGCCATCCACAGGCCAACTCGGCCAAGGGCAA...TGCCTTCCCGCTTCTACATGCTTGAGCTTGAAAAGCAGTCACCTCCTCGGGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255006.12
ENST00000440354.2
ENST00000648440.1
CDS TCA 90 bp ATTCCTCTGCCGCACAAGCTGCAGGTTCTCCTTGAGTTGCTTCCATaGGCCATCGGCCATGTGAAAGTCCTTCAGCATGGCCTCCACGTG +
Preference number: 5 (lower is better)
Translates to: IPLPHKLQVLLELLP*AIGHVKVLQHGLHV
Trigger: CACGTGGAGGCCATGCTGAAGGACTTTCACATGGCCGATGGCTCATGGAAGCAACTCAAGGAGAACCTGCAGCTTGTGCGGCAGAGGAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255006.12
ENST00000440354.2
ENST00000484638.1
ENST00000648440.1
CDS TCA 90 bp TCCGGGTTCTGTGGGTTTCAGCGGGTTCCAGGCCATTTTCCAGGTTaGCATCTGTCCGCACCATCTCCTGTTTCAGTTCTCCGATCTCCG +
Preference number: 5 (lower is better)
Translates to: SGFCGFQRVPGHFPG*HLSAPSPVSVLRSP
Trigger: CGGAGATCGGAGAACTGAAACAGGAGATGGTGCGGACAGATGTCAACCTGGAAAATGGCCTGGAACCCGCTGAAACCCACAGAACCCGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000467569.5
ENST00000488077.1
CDS-3UTR CAA 90 bp CAAGCATGTAGAAGCGGGAAGGCAAGGCTTCCAGCTCCCCTTTGGATGCACCACAGGCCATTTTCCAGGTaGACATCTGTCCGCACCATC +
Preference number: 5 (lower is better)
Translates to: QACRSGKARLPAPLWMHHRPFSR*TSVRTI
Trigger: GATGGTGCGGACAGATGTCAACCTGGAAAATGGCCT...GTGGTGCATCCAAAGGGGAGCTGGAAGCCTTGCCTTCCCGCTTCTACATGCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255006.12
ENST00000440354.2
ENST00000648440.1
CDS-3UTR CAA 90 bp AGTTGGCCTGTGGATGGCTTAGTCACTACACTGAGGGGTCCCCGAGGAGGTGACGGCTTCAAGATGCACTaGTGCATGGCTTTTTCCAGC +
Preference number: 5 (lower is better)
Translates to: SWPVDGLVTTLRGPRGGDGFKMH*CMAFSS
Trigger: GCTGGAAAAAGCCATGCACAAGTGCATCTTGAAGCC...GTCACCTCCTCGGGGACCCCTCAGTGTAGTGACTAAGCCATCCACAGGCCAACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000255006.12
ENST00000440354.2
ENST00000648440.1
CDS-3UTR CAA 90 bp CTAAAGTTGCCCTTGGCCGAGTTGGCCTGTGGATGGCTTAGTCACTACACTGAGTTGCCCTTGGCCGAGTaGGCCTGTGGATGGCTTAGT +
Preference number: 5 (lower is better)
Translates to: LKLPLAELACGWLSHYTELPLAE*ACGWLS
Trigger: ACTAAGCCATCCACAGGCCAACTCGGCCAAGGGCAA...CTCAGTGTAGTGACTAAGCCATCCACAGGCCAACTCGGCCAAGGGCAACTTTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255006.12
ENST00000440354.2
ENST00000648440.1
CDS-3UTR CAA 90 bp CAAGCATGTAGAAGCGGGAAGGCAAGGCTTCCAGCTCCCCTTTGGATGCACCACGTACCGGTTGGAAGCTaGTTCTTTTCCTGGCTTCCC +
Preference number: 5 (lower is better)
Translates to: QACRSGKARLPAPLWMHHVPVGS*FFSWLP
Trigger: GGGAAGCCAGGAAAAGAACAAGCTTCCAACCGGTAC...GTGGTGCATCCAAAGGGGAGCTGGAAGCCTTGCCTTCCCGCTTCTACATGCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648440.1
CDS-3UTR CAA 90 bp TGCCCTTGGCCGAGTTGGCCTGTGGATGGCTTAGTCACTACACTGAGGGGTCCCGAAATTCCTCCAGACTaGTACCGGTTGGAAGCTTGT +
Preference number: 5 (lower is better)
Translates to: CPWPSWPVDGLVTTLRGPEIPPD*YRLEAC
Trigger: ACAAGCTTCCAACCGGTACAAGTCTGGAGGAATTTC...GGGACCCCTCAGTGTAGTGACTAAGCCATCCACAGGCCAACTCGGCCAAGGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648440.1
CDS CCA 90 bp TCCAGGCAGAGCTACGTTCCCATGTTTGTTATGGTTGACTGTTTCTaGCATGCTCGTCTGGGTTTCAGTCCTGGCCAGCCGAGGGCTTGT +
Preference number: 5 (lower is better)
Translates to: SRQSYVPMFVMVDCF*HARLGFSPGQPRAC
Trigger: ACAAGCCCTCGGCTGGCCAGGACTGAAACCCAGACGAGCATGCCAGAAACAGTCAACCATAACAAACATGGGAACGTAGCTCTGCCTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255006.12
ENST00000484638.1
ENST00000648440.1
CDS CCA 90 bp CTGCTTCCAGAAAAGAAGCCTGCTTCTTCAGCCGGGGTGGAGGGATaGGAGTTGGTTTCGTTCCAGGCAGAGCTACGTTCCCATGTTTGT +
Preference number: 5 (lower is better)
Translates to: LLPEKKPASSAGVEG*ELVSFQAELRSHVC
Trigger: ACAAACATGGGAACGTAGCTCTGCCTGGAACGAAACCAACTCCCATCCCTCCACCCCGGCTGAAGAAGCAGGCTTCTTTTCTGGAAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255006.12
ENST00000484638.1
ENST00000648440.1
CDS-3UTR CAA 90 bp TGCCCTTGGCCGAGTTGGCCTGTGGATGGCTTAGTCACTACACTGAGGGGTCCCGAAGGCGTCCTGGTTTaGATAGAATGCACTCCATTT +
Preference number: 5 (lower is better)
Translates to: CPWPSWPVDGLVTTLRGPEGVLV*IECTPF
Trigger: AAATGGAGTGCATTCTATCAAAACCAGGACGCCTTC...GGGACCCCTCAGTGTAGTGACTAAGCCATCCACAGGCCAACTCGGCCAAGGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
CDS-3UTR CAA 90 bp GTCCCCGAGGAGGTGACTGCTTTTCAAGCTCAAGCATGTAGAAGCGGGAAGGCAAGCTGCAGGTTCTCCTaGAGTTGCTTCCATGAGCCA +
Preference number: 5 (lower is better)
Translates to: VPEEVTAFQAQACRSGKASCRFS*SCFHEP
Trigger: TGGCTCATGGAAGCAACTCAAGGAGAACCTGCAGCT...TGCCTTCCCGCTTCTACATGCTTGAGCTTGAAAAGCAGTCACCTCCTCGGGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255006.12
ENST00000440354.2
ENST00000648440.1
CDS-3UTR CAA 90 bp AGTTGGCCTGTGGATGGCTTAGTCACTACACTGAGGGGTCCCCGAGGAGGTGACGAGCAGTCGCGCTGCTaGTTCTTCTTGGAAATTCTT +
Preference number: 5 (lower is better)
Translates to: SWPVDGLVTTLRGPRGGDEQSRC*FFLEIL
Trigger: AAGAATTTCCAAGAAGAACAAGCAGCGCGACTGCTC...GTCACCTCCTCGGGGACCCCTCAGTGTAGTGACTAAGCCATCCACAGGCCAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255006.12
ENST00000440354.2
ENST00000648440.1
CDS TCA 90 bp TTACCATGCTGTGGGTTTCAGCGGGTTCCAGGCCATTTTCCAGGTTaGCATCTGTCCGCACCATCTCCTGTTTCAGTTCTCCGATCTCCG +
Preference number: 5 (lower is better)
Translates to: LPCCGFQRVPGHFPG*HLSAPSPVSVLRSP
Trigger: CGGAGATCGGAGAACTGAAACAGGAGATGGTGCGGACAGATGTCAACCTGGAAAATGGCCTGGAACCCGCTGAAACCCACAGCATGGTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255006.12
ENST00000440354.2
ENST00000459721.5
ENST00000648440.1
CDS GCA 90 bp ATAATGAATTACCCCTTCACGCCAGCATCTCTTCTCCTCTCCCACTaGAGTTCAGCCCAACCTCCCCAGCGTTCTGAAGGGCTTGCACAT +
Preference number: 5 (lower is better)
Translates to: IMNYPFTPASLLLSH*SSAQPPQRSEGLAH
Trigger: ATGTGCAAGCCCTTCAGAACGCTGGGGAGGTTGGGCTGAACTGCAGTGGGAGAGGAGAAGAGATGCTGGCGTGAAGGGGTAATTCATTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432334.2
CDS-3UTR CAA 90 bp CCAGCAGACTGCACTCCTCAGTCCTTTGTTAGAGTTCATATTTCTCTCTCTACCTCCGTGCCATTCGCGTaGGGAGTCCTTGTGCTCGGC +
Preference number: 5 (lower is better)
Translates to: PADCTPQSFVRVHISLSTSVPFA*GVLVLG
Trigger: GCCGAGCACAAGGACTCCCAACGCGAATGGCACGGA...GGTAGAGAGAGAAATATGAACTCTAACAAAGGACTGAGGAGTGCAGTCTGCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
CDS-3UTR CAA 90 bp CCAGCAGACTGCACTCCTCAGTCCTTTGTTAGAGTTCATATTTCTCTCTCTACCCGCCGCTCAAGGTCTTaGCACCGCCCTCTGCTTCCA +
Preference number: 5 (lower is better)
Translates to: PADCTPQSFVRVHISLSTRRSRS*HRPLLP
Trigger: TGGAAGCAGAGGGCGGTGCAAAGACCTTGAGCGGCG...GGTAGAGAGAGAAATATGAACTCTAACAAAGGACTGAGGAGTGCAGTCTGCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
CDS-3UTR CAA 90 bp CAAGCATGTAGAAGCGGGAAGGCAAGGCTTCCAGCTCCCCTTTGGATGCACCACGTGCTCCATATGCGCTaGTCAAGTAATAGCCTCCTT +
Preference number: 5 (lower is better)
Translates to: QACRSGKARLPAPLWMHHVLHMR*SSNSLL
Trigger: AAGGAGGCTATTACTTGACAAGCGCATATGGAGCAC...GTGGTGCATCCAAAGGGGAGCTGGAAGCCTTGCCTTCCCGCTTCTACATGCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255006.12
ENST00000440354.2
ENST00000648440.1
CDS TCA 90 bp TTGGTTTCGTTCCAGGCAGAGCTACGTTCCCATGTTTGTTATGGTTaGCTGTTTCTGGCATGCTCGTCTGGGTTTCAGTCCTGGCCAGCC +
Preference number: 5 (lower is better)
Translates to: LVSFQAELRSHVCYG*LFLACSSGFQSWPA
Trigger: GGCTGGCCAGGACTGAAACCCAGACGAGCATGCCAGAAACAGTCAACCATAACAAACATGGGAACGTAGCTCTGCCTGGAACGAAACCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255006.12
ENST00000484638.1
ENST00000648440.1
CDS CCA 90 bp GGAGTTGGTTTCGTTCCAGGCAGAGCTACGTTCCCATGTTTGTTATaGTTGACTGTTTCTGGCATGCTCGTCTGGGTTTCAGTCCTGGCC +
Preference number: 5 (lower is better)
Translates to: GVGFVPGRATFPCLL*LTVSGMLVWVSVLA
Trigger: GGCCAGGACTGAAACCCAGACGAGCATGCCAGAAACAGTCAACCATAACAAACATGGGAACGTAGCTCTGCCTGGAACGAAACCAACTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255006.12
ENST00000484638.1
ENST00000648440.1
CDS CCA 90 bp CAGAAAAGAAGCCTGCTTCTTCAGCCGGGGTGGAGGGATGGGAGTTaGTTTCGTTCCAGGCAGAGCTACGTTCCCATGTTTGTTATGGTT +
Preference number: 5 (lower is better)
Translates to: QKRSLLLQPGWRDGS*FRSRQSYVPMFVMV
Trigger: AACCATAACAAACATGGGAACGTAGCTCTGCCTGGAACGAAACCAACTCCCATCCCTCCACCCCGGCTGAAGAAGCAGGCTTCTTTTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255006.12
ENST00000484638.1
ENST00000648440.1
CDS-3UTR CAA 90 bp CCAGCAGACTGCACTCCTCAGTCCTTTGTTAGAGTTCATATTTCTCTCTCTACCTTCTGCAGCTGGGACTaGACGAGCTTGGGCAGCACG +
Preference number: 5 (lower is better)
Translates to: PADCTPQSFVRVHISLSTFCSWD*TSLGST
Trigger: CGTGCTGCCCAAGCTCGTCAAGTCCCAGCTGCAGAA...GGTAGAGAGAGAAATATGAACTCTAACAAAGGACTGAGGAGTGCAGTCTGCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
CDS-3UTR CAA 90 bp TGCCCTTGGCCGAGTTGGCCTGTGGATGGCTTAGTCACTACACTGAGGGGTCCCCGCTGCTTGTTCTTCTaGGAAATTCTTTATCAGAGA +
Preference number: 5 (lower is better)
Translates to: CPWPSWPVDGLVTTLRGPRCLFF*EILYQR
Trigger: TCTCTGATAAAGAATTTCCAAGAAGAACAAGCAGCG...GGGACCCCTCAGTGTAGTGACTAAGCCATCCACAGGCCAACTCGGCCAAGGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255006.12
ENST00000440354.2
ENST00000648440.1
CDS-3UTR CAA 90 bp GTCCCCGAGGAGGTGACTGCTTTTCAAGCTCAAGCATGTAGAAGCGGGAAGGCAGAGCAGTCGCGCTGCTaGTTCTTCTTGGAAATTCTT +
Preference number: 5 (lower is better)
Translates to: VPEEVTAFQAQACRSGKAEQSRC*FFLEIL
Trigger: AAGAATTTCCAAGAAGAACAAGCAGCGCGACTGCTC...TGCCTTCCCGCTTCTACATGCTTGAGCTTGAAAAGCAGTCACCTCCTCGGGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255006.12
ENST00000440354.2
ENST00000648440.1
CDS-3UTR CAA 90 bp CATCTTTTGAAGAGCCTGAACCAGCAGACTGCACTCCTCAGTCCTTTGTTAGAGGCTTCCAGCTCCCCTTaGGATGCACCACTGGGAAGT +
Preference number: 5 (lower is better)
Translates to: HLLKSLNQQTALLSPLLEASSSP*DAPLGS
Trigger: ACTTCCCAGTGGTGCATCCAAAGGGGAGCTGGAAGC...CTCTAACAAAGGACTGAGGAGTGCAGTCTGCTGGTTCAGGCTCTTCAAAAGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
CDS TCA 90 bp TTTCCAGCACCACATTGTATGTGCTTTCCTTTATGGCAAATTCCTTaGGTGGGGCCCCAAATTCACAGGGCAGGCGGAGGGAGAGGACTT +
Preference number: 5 (lower is better)
Translates to: FPAPHCMCFPLWQIP*VGPQIHRAGGGRGL
Trigger: AAGTCCTCTCCCTCCGCCTGCCCTGTGAATTTGGGGCCCCACTCAAGGAATTTGCCATAAAGGAAAGCACATACAATGTGGTGCTGGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000440354.2
CDS CCA 90 bp CAGGGAAAAGGTGTATGTGCTTTCCTTTATGGCAAATTCCTTGAGTaGGGCCCCAAATTCACAGGGCAGGCGGAGGGAGAGGACTTTCTT +
Preference number: 5 (lower is better)
Translates to: QGKGVCAFLYGKFLE*GPKFTGQAEGEDFL
Trigger: AAGAAAGTCCTCTCCCTCCGCCTGCCCTGTGAATTTGGGGCCCCACTCAAGGAATTTGCCATAAAGGAAAGCACATACACCTTTTCCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255006.12
ENST00000467569.5
ENST00000648440.1
CDS CCA 90 bp ACGTTCCCATGTTTGTTATGGTTGACTGTTTCTGGCATGCTCGTCTaGGTTTCAGTCCTGGCCAGCCGAGGGCTTGTGTGGAGACTATTA +
Preference number: 5 (lower is better)
Translates to: TFPCLLWLTVSGMLV*VSVLASRGLVWRLL
Trigger: TAATAGTCTCCACACAAGCCCTCGGCTGGCCAGGACTGAAACCCAGACGAGCATGCCAGAAACAGTCAACCATAACAAACATGGGAACGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255006.12
ENST00000484638.1
ENST00000648440.1
CDS CCA 90 bp CAGCACCACATTGTATGTGCTTTCCTTTATGGCAAATTCCTTGAGTaGGGCCCCAAATTCACAGGGCAGGCGGAGGGAGAGGACTTTCTT +
Preference number: 5 (lower is better)
Translates to: QHHIVCAFLYGKFLE*GPKFTGQAEGEDFL
Trigger: AAGAAAGTCCTCTCCCTCCGCCTGCCCTGTGAATTTGGGGCCCCACTCAAGGAATTTGCCATAAAGGAAAGCACATACAATGTGGTGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440354.2
CDS-3UTR CAA 90 bp GTCCCCGAGGAGGTGACTGCTTTTCAAGCTCAAGCATGTAGAAGCGGGAAGGCATTTATGGCAAATTCCTaGAGTGGGGCCCCAAATTCA +
Preference number: 5 (lower is better)
Translates to: VPEEVTAFQAQACRSGKAFMANS*SGAPNS
Trigger: TGAATTTGGGGCCCCACTCAAGGAATTTGCCATAAA...TGCCTTCCCGCTTCTACATGCTTGAGCTTGAAAAGCAGTCACCTCCTCGGGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000255006.12
ENST00000440354.2
ENST00000648440.1
CDS-3UTR CAA 90 bp TGCACTCCTCAGTCCTTTGTTAGAGTTCATATTTCTCTCTCTACCTCTCTCTACGGAAGGTTCGGGGGTTaGCTGTCAGCTGGGGAGCTC +
Preference number: 5 (lower is better)
Translates to: CTPQSFVRVHISLSTSLYGRFGG*LSAGEL
Trigger: GAGCTCCCCAGCTGACAGCAAACCCCCGAACCTTCC...GTAGAGAGAGGTAGAGAGAGAAATATGAACTCTAACAAAGGACTGAGGAGTGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
CDS-3UTR CAA 90 bp TGCACTCCTCAGTCCTTTGTTAGAGTTCATATTTCTCTCTCTACCTCTCTCTACTCGCGTTGGGAGTCCTaGTGCTCGGCCGTTTCAGGC +
Preference number: 5 (lower is better)
Translates to: CTPQSFVRVHISLSTSLYSRWES*CSAVSG
Trigger: GCCTGAAACGGCCGAGCACAAGGACTCCCAACGCGA...GTAGAGAGAGGTAGAGAGAGAAATATGAACTCTAACAAAGGACTGAGGAGTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
CDS-3UTR CAA 90 bp AGCAAAACACCACTAAACGTGAACAAGAGAACAGTACATCCGATTTCCAAAGGCGCCTCCACGTGCCCCTaGAGGGGCTTCAAGATGCAC +
Preference number: 5 (lower is better)
Translates to: SKTPLNVNKRTVHPISKGASTCP*RGFKMH
Trigger: GTGCATCTTGAAGCCCCTCAAGGGGCACGTGGAGGC...GCCTTTGGAAATCGGATGTACTGTTCTCTTGTTCACGTTTAGTGGTGTTTTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
CDS-3UTR CAA 90 bp AGTTGGCCTGTGGATGGCTTAGTCACTACACTGAGGGGTCCCCGAGGAGGTGACTGCATGGTCATGAACTaGACTTTGATTTTCTCCACA +
Preference number: 5 (lower is better)
Translates to: SWPVDGLVTTLRGPRGGDCMVMN*TLIFST
Trigger: TGTGGAGAAAATCAAAGTCAAGTTCATGACCATGCA...GTCACCTCCTCGGGGACCCCTCAGTGTAGTGACTAAGCCATCCACAGGCCAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000255006.12
ENST00000440354.2
ENST00000648440.1
CDS TCA 90 bp TTCTCCGTTTGTGCCACTGCCTCAGGGTGTCTCTGGTTTCTGAGCTaGGCAGTCGCGCTGCTTGTTCTTCTTGGAAATTCTTTATCAGAG +
Preference number: 5 (lower is better)
Translates to: FSVCATASGCLWFLS*AVALLVLLGNSLSE
Trigger: CTCTGATAAAGAATTTCCAAGAAGAACAAGCAGCGCGACTGCTCAGCTCAGAAACCAGAGACACCCTGAGGCAGTGGCACAAACGGAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255006.12
ENST00000440354.2
ENST00000484638.1
ENST00000648440.1
CDS TCA 90 bp AATGGTAGAACATCCTGTATGTGCTTTCCTTTATGGCAAATTCCTTaGGTGGGGCCCCAAATTCACAGGGCAGGCGGAGGGAGAGGACTT +
Preference number: 5 (lower is better)
Translates to: NGRTSCMCFPLWQIP*VGPQIHRAGGGRGL
Trigger: AAGTCCTCTCCCTCCGCCTGCCCTGTGAATTTGGGGCCCCACTCAAGGAATTTGCCATAAAGGAAAGCACATACAGGATGTTCTACCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484638.1
CDS TCA 90 bp CTTGCCTGCTTCTCCATGGTAATCAGCAATCAATCCTTGTCCAGGTaGTCCAAGTCAGCATCCCAAACGAAGGCAGCCAGATGCTGTGTT +
Preference number: 5 (lower is better)
Translates to: LACFSMVISNQSLSR*SKSASQTKAARCCV
Trigger: AACACAGCATCTGGCTGCCTTCGTTTGGGATGCTGACTTGGATCACCTGGACAAGGATTGATTGCTGATTACCATGGAGAAGCAGGCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616029.2
CDS GCA 90 bp GTCTCCATCCTGTTACAAGGAACCCAGGCTGCAACCAGGAAAAACTaGCATCAGAAAGTTTATCTAAGCCGGAGCAAACTTGGCTGGACC +
Preference number: 5 (lower is better)
Translates to: VSILLQGTQAATRKN*HQKVYLSRSKLGWT
Trigger: GGTCCAGCCAAGTTTGCTCCGGCTTAGATAAACTTTCTGATGGCAGTTTTTCCTGGTTGCAGCCTGGGTTCCTTGTAACAGGATGGAGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000432334.2
ENST00000616029.2
ENST00000648165.1
CDS GCA 90 bp CTGTTAGGCAGAGTTCCTGCCTATGATTCCTTAGAGAAGCCGCGATaGGTACATTGGTTCTACCTCCTTCAGAGTAGAGACCCCACAGAA +
Preference number: 5 (lower is better)
Translates to: LLGRVPAYDSLEKPR*VHWFYLLQSRDPTE
Trigger: TTCTGTGGGGTCTCTACTCTGAAGGAGGTAGAACCAATGTACGCATCGCGGCTTCTCTAAGGAATCATAGGCAGGAACTCTGCCTAACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616029.2
CDS-3UTR CAA 90 bp CTAAAGTTGCCCTTGGCCGAGTTGGCCTGTGGATGGCTTAGTCACTACACTGAGAGCGTTCTGAAGGGCTaGCACATTTTATCTTTTCCG +
Preference number: 5 (lower is better)
Translates to: LKLPLAELACGWLSHYTESVLKG*HILSFP
Trigger: CGGAAAAGATAAAATGTGCAAGCCCTTCAGAACGCT...CTCAGTGTAGTGACTAAGCCATCCACAGGCCAACTCGGCCAAGGGCAACTTTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255006.12
CDS-3UTR CAA 90 bp CTAAAGTTGCCCTTGGCCGAGTTGGCCTGTGGATGGCTTAGTCACTACACTGAGGAAGGCGTCCTGGTTTaGATAGAATGCACTCCATTT +
Preference number: 5 (lower is better)
Translates to: LKLPLAELACGWLSHYTEEGVLV*IECTPF
Trigger: AAATGGAGTGCATTCTATCAAAACCAGGACGCCTTC...CTCAGTGTAGTGACTAAGCCATCCACAGGCCAACTCGGCCAAGGGCAACTTTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
CDS-3UTR CAA 90 bp CTGCTTTTCAAGCTCAAGCATGTAGAAGCGGGAAGGCAAGGCTTCCAGCTCCCCGCTACGTTCCCATGTTaGTTATGGTTGACTGTTTCT +
Preference number: 5 (lower is better)
Translates to: LLFKLKHVEAGRQGFQLPATFPC*LWLTVS
Trigger: AGAAACAGTCAACCATAACAAACATGGGAACGTAGC...GGGGAGCTGGAAGCCTTGCCTTCCCGCTTCTACATGCTTGAGCTTGAAAAGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
CDS-3UTR CAA 90 bp AGTTGCCCTTGGCCGAGTTGGCCTGTGGATGGCTTAGTCACTACACTGAGGGGTTGCATGGTCATGAACTaGACTTTGATTTTCTCCACA +
Preference number: 5 (lower is better)
Translates to: SCPWPSWPVDGLVTTLRGCMVMN*TLIFST
Trigger: TGTGGAGAAAATCAAAGTCAAGTTCATGACCATGCA...ACCCCTCAGTGTAGTGACTAAGCCATCCACAGGCCAACTCGGCCAAGGGCAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255006.12
ENST00000440354.2
ENST00000648440.1
CDS TCA 90 bp ATTAATAAAGCACAGGGCCCCGTTGGTCTGGCTGCACTCCAGCTCTaGAGGCGTCCTGGTTTTGATAGAATGCACTCCATTTATAAGGCA +
Preference number: 5 (lower is better)
Translates to: INKAQGPVGLAALQL*RRPGFDRMHSIYKA
Trigger: TGCCTTATAAATGGAGTGCATTCTATCAAAACCAGGACGCCTTCAGAGCTGGAGTGCAGCCAGACCAACGGGGCCCTGTGCTTTATTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255006.12
ENST00000484638.1
ENST00000648440.1
CDS CCA 90 bp AGAGTTCCTGCCTATGATTCCTTAGAGAAGCCGCGATGCGTACATTaGTTCTACCTCCTTCAGAGTAGAGACCCCACAGAAGTGGAGATA +
Preference number: 5 (lower is better)
Translates to: RVPAYDSLEKPRCVH*FYLLQSRDPTEVEI
Trigger: TATCTCCACTTCTGTGGGGTCTCTACTCTGAAGGAGGTAGAACCAATGTACGCATCGCGGCTTCTCTAAGGAATCATAGGCAGGAACTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616029.2
CDS-3UTR CAA 90 bp CCAGCAGACTGCACTCCTCAGTCCTTTGTTAGAGTTCATATTTCTCTCTCTACCAGGCCATTTTCCAGGTaGACATCTGTCCGCACCATC +
Preference number: 5 (lower is better)
Translates to: PADCTPQSFVRVHISLSTRPFSR*TSVRTI
Trigger: GATGGTGCGGACAGATGTCAACCTGGAAAATGGCCT...GGTAGAGAGAGAAATATGAACTCTAACAAAGGACTGAGGAGTGCAGTCTGCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
CDS-3UTR CAA 90 bp AGCAAAACACCACTAAACGTGAACAAGAGAACAGTACATCCGATTTCCAAAGGCGTGGAGGGATGGGAGTaGGTTTCGTTCCAGGCAGAG +
Preference number: 5 (lower is better)
Translates to: SKTPLNVNKRTVHPISKGVEGWE*VSFQAE
Trigger: CTCTGCCTGGAACGAAACCAACTCCCATCCCTCCAC...GCCTTTGGAAATCGGATGTACTGTTCTCTTGTTCACGTTTAGTGGTGTTTTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
CDS-3UTR CAA 90 bp ACGTGGATACAAGACCCTCATAGTTTGTGCACCTGCAAACTGGTTTTATTTAACGGGCGCCATGGTCTCTaGGTCACTTTCCCCCTCGTA +
Preference number: 5 (lower is better)
Translates to: TWIQDPHSLCTCKLVLFNGRHGL*VTFPLV
Trigger: TACGAGGGGGAAAGTGACCAAGAGACCATGGCGCCC...GTTAAATAAAACCAGTTTGCAGGTGCACAAACTATGAGGGTCTTGTATCCACGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
CDS-3UTR CAA 90 bp CGCACTGCATCGCAAGCATCTGCTGTTGAATTCAAAAGAACTTGTATCTTAAGTGGGCGCCATGGTCTCTaGGTCACTTTCCCCCTCGTA +
Preference number: 5 (lower is better)
Translates to: RTASQASAVEFKRTCILSGRHGL*VTFPLV
Trigger: TACGAGGGGGAAAGTGACCAAGAGACCATGGCGCCC...ACTTAAGATACAAGTTCTTTTGAATTCAACAGCAGATGCTTGCGATGCAGTGCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
CDS-3UTR CAA 90 bp AGCAAAACACCACTAAACGTGAACAAGAGAACAGTACATCCGATTTCCAAAGGCTGGCTAAAGTTGCCCTaGGCCGAGTTGGCCTGTGGA +
Preference number: 5 (lower is better)
Translates to: SKTPLNVNKRTVHPISKGWLKLP*AELACG
Trigger: TCCACAGGCCAACTCGGCCAAGGGCAACTTTAGCCA...GCCTTTGGAAATCGGATGTACTGTTCTCTTGTTCACGTTTAGTGGTGTTTTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
CDS-3UTR CAA 90 bp CAATTCTCCATTGCCAAAAGAGAATCCTACTGTTTCACAAACCTCAGCTACCTTCTTGCGTGGCTAAAGTaGCCCTTGGCCGAGTTGGCC +
Preference number: 5 (lower is better)
Translates to: QFSIAKRESYCFTNLSYLLAWLK*PLAELA
Trigger: GGCCAACTCGGCCAAGGGCAACTTTAGCCACGCAAG...AAGGTAGCTGAGGTTTGTGAAACAGTAGGATTCTCTTTTGGCAATGGAGAATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255006.12
ENST00000440354.2
ENST00000648440.1
CDS-3UTR CAA 90 bp CTAAAGTTGCCCTTGGCCGAGTTGGCCTGTGGATGGCTTAGTCACTACACTGAGACAATCTCAGGACACTaGAACCATCAGATGCAATTC +
Preference number: 5 (lower is better)
Translates to: LKLPLAELACGWLSHYTETISGH*NHQMQF
Trigger: GAATTGCATCTGATGGTTCAAGTGTCCTGAGATTGT...CTCAGTGTAGTGACTAAGCCATCCACAGGCCAACTCGGCCAAGGGCAACTTTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255006.12
ENST00000440354.2
ENST00000648440.1
CDS TCA 90 bp TGTACTCGATTTCAGTGTCCAATTCAAGCATGTCACACTGGGCTATaGCATAGGTCAGGACTGGCAAGAAGTCATCAGCGCCATACATCC +
Preference number: 5 (lower is better)
Translates to: CTRFQCPIQACHTGL*HRSGLARSHQRHTS
Trigger: GGATGTATGGCGCTGATGACTTCTTGCCAGTCCTGACCTATGTCATAGCCCAGTGTGACATGCTTGAATTGGACACTGAAATCGAGTACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255006.12
ENST00000440354.2
ENST00000484638.1
ENST00000648440.1
CDS GCA 90 bp GACTCACACGGCTACACTGAATTCTACTTTGCACACGCTGGATCTTaGTGCATTACTGTTTCCATCATTGGGAGTAGGTGGATATGGCAC +
Preference number: 5 (lower is better)
Translates to: DSHGYTEFYFAHAGS*CITVSIIGSRWIWH
Trigger: GTGCCATATCCACCTACTCCCAATGATGGAAACAGTAATGCAGCAAGATCCAGCGTGTGCAAAGTAGAATTCAGTGTAGCCGTGTGAGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467569.5
CDS GCA 90 bp TGTCTTACCATGCTGAGAATGCAAAATGAGTCCATCCTCTTTAGCTaGTCCCCTGTAAGCCTTCTGGAGACTCACACGGCTACACTGAAT +
Preference number: 5 (lower is better)
Translates to: CLTMLRMQNESILFS*SPVSLLETHTATLN
Trigger: ATTCAGTGTAGCCGTGTGAGTCTCCAGAAGGCTTACAGGGGAGCAGCTAAAGAGGATGGACTCATTTTGCATTCTCAGCATGGTAAGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467569.5
CDS-3UTR CAA 90 bp CCAGCAGACTGCACTCCTCAGTCCTTTGTTAGAGTTCATATTTCTCTCTCTACCCCTCCGACTTGGCTGTaGAAATGGCATAAGGCAACT +
Preference number: 5 (lower is better)
Translates to: PADCTPQSFVRVHISLSTPPTWL*KWHKAT
Trigger: AGTTGCCTTATGCCATTTCAACAGCCAAGTCGGAGG...GGTAGAGAGAGAAATATGAACTCTAACAAAGGACTGAGGAGTGCAGTCTGCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
CDS-3UTR CAA 90 bp ACGTGGATACAAGACCCTCATAGTTTGTGCACCTGCAAACTGGTTTTATTTAACGTGGAGGGATGGGAGTaGGTTTCGTTCCAGGCAGAG +
Preference number: 5 (lower is better)
Translates to: TWIQDPHSLCTCKLVLFNVEGWE*VSFQAE
Trigger: CTCTGCCTGGAACGAAACCAACTCCCATCCCTCCAC...GTTAAATAAAACCAGTTTGCAGGTGCACAAACTATGAGGGTCTTGTATCCACGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
CDS-3UTR CAA 90 bp CACAGTACAATAACATGTTTTTGTAACTACCTGTGTTACGTGGATACAAGACCCTGGGACTTGACGAGCTaGGGCAGCACGAAGGAGCTG +
Preference number: 5 (lower is better)
Translates to: HSTITCFCNYLCYVDTRPWDLTS*GSTKEL
Trigger: CAGCTCCTTCGTGCTGCCCAAGCTCGTCAAGTCCCA...GGGTCTTGTATCCACGTAACACAGGTAGTTACAAAAACATGTTATTGTACTGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
CDS-3UTR CAA 90 bp CCAGCAGACTGCACTCCTCAGTCCTTTGTTAGAGTTCATATTTCTCTCTCTACCCAGCACCACATCTATTaGGTCTTCAGGGATCAGCGA +
Preference number: 5 (lower is better)
Translates to: PADCTPQSFVRVHISLSTQHHIY*VFRDQR
Trigger: TCGCTGATCCCTGAAGACCAAATAGATGTGGTGCTG...GGTAGAGAGAGAAATATGAACTCTAACAAAGGACTGAGGAGTGCAGTCTGCTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
CDS-3UTR CAA 90 bp CAATTCTCCATTGCCAAAAGAGAATCCTACTGTTTCACAAACCTCAGCTACCTTTCAGGGTCCCCCACCTaGAACTTCTCAGCGCAGATC +
Preference number: 5 (lower is better)
Translates to: QFSIAKRESYCFTNLSYLSGSPT*NFSAQI
Trigger: GATCTGCGCTGAGAAGTTCAAGGTGGGGGACCCTGA...AAGGTAGCTGAGGTTTGTGAAACAGTAGGATTCTCTTTTGGCAATGGAGAATTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000255006.12
ENST00000440354.2
ENST00000648440.1
CDS GCA 90 bp TCACACGGCTACACTGAATTCTACTTTGCACACGCTGGATCTTGCTaGATTACTGTTTCCATCATTGGGAGTAGGTGGATATGGCACAGA +
Preference number: 5 (lower is better)
Translates to: SHGYTEFYFAHAGSC*ITVSIIGSRWIWHR
Trigger: TCTGTGCCATATCCACCTACTCCCAATGATGGAAACAGTAATGCAGCAAGATCCAGCGTGTGCAAAGTAGAATTCAGTGTAGCCGTGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000467569.5
ENST00000488077.1
CDS-3UTR CAA 90 bp AGCAAAACACCACTAAACGTGAACAAGAGAACAGTACATCCGATTTCCAAAGGCAGGCCATTTTCCAGGTaGACATCTGTCCGCACCATC +
Preference number: 5 (lower is better)
Translates to: SKTPLNVNKRTVHPISKGRPFSR*TSVRTI
Trigger: GATGGTGCGGACAGATGTCAACCTGGAAAATGGCCT...GCCTTTGGAAATCGGATGTACTGTTCTCTTGTTCACGTTTAGTGGTGTTTTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
CDS-3UTR CAA 90 bp CATCTTTTGAAGAGCCTGAACCAGCAGACTGCACTCCTCAGTCCTTTGTTAGAGTTTATGGCAAATTCCTaGAGTGGGGCCCCAAATTCA +
Preference number: 5 (lower is better)
Translates to: HLLKSLNQQTALLSPLLEFMANS*SGAPNS
Trigger: TGAATTTGGGGCCCCACTCAAGGAATTTGCCATAAA...CTCTAACAAAGGACTGAGGAGTGCAGTCTGCTGGTTCAGGCTCTTCAAAAGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
CDS-3UTR CAA 90 bp TTGTTAGAGTTCATATTTCTCTCTCTACCTCTCTCTACATTCATTTCTCTCCTTTCCGTGCCATTCGCGTaGGGAGTCCTTGTGCTCGGC +
Preference number: 5 (lower is better)
Translates to: LLEFIFLSLPLSTFISLLSVPFA*GVLVLG
Trigger: GCCGAGCACAAGGACTCCCAACGCGAATGGCACGGA...AAGGAGAGAAATGAATGTAGAGAGAGGTAGAGAGAGAAATATGAACTCTAACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
CDS TCA 90 bp TCCAGACTTGTACCGGTTGGAAGCTTGTTCTTTTCCTGGCTTCCCTaGAGGGTAAAGTGGATTCTTGAGAAAATGAGTCCAACATGTCCA +
Preference number: 5 (lower is better)
Translates to: SRLVPVGSLFFSWLP*RVKWILEKMSPTCP
Trigger: TGGACATGTTGGACTCATTTTCTCAAGAATCCACTTTACCCTTCAGGGAAGCCAGGAAAAGAACAAGCTTCCAACCGGTACAAGTCTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648440.1
CDS GCA 90 bp ACCCGCAGCAGCAGCATGACCTTCTTTTCCGGCGAATACATCTTCTaGATGGTCATGAACTTGACTTTGATTTTCTCCACATCCACAAAA +
Preference number: 5 (lower is better)
Translates to: TRSSSMTFFSGEYIF*MVMNLTLIFSTSTK
Trigger: TTTTGTGGATGTGGAGAAAATCAAAGTCAAGTTCATGACCATGCAGAAGATGTATTCGCCGGAAAAGAAGGTCATGCTGCTGCTGCGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000255006.12
ENST00000440354.2
ENST00000484638.1
ENST00000648440.1
CDS GCA 90 bp AATGAATTAGTCCTCTTAGGATCCCCATGTGCCTTGGTCCAGATCTaGTCCCATCAGACCACAATGAAAGCTTTTAAGATATCCCTCCTG +
Preference number: 5 (lower is better)
Translates to: NELVLLGSPCALVQI*SHQTTMKAFKISLL
Trigger: CAGGAGGGATATCTTAAAAGCTTTCATTGTGGTCTGATGGGAGCAGATCTGGACCAAGGCACATGGGGATCCTAAGAGGACTAATTCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000616029.2
ENST00000648165.1
CDS-3UTR CAA 90 bp CTACAAGCAAATCACACATGGAATAGATTTTGCCAAACCTCACTGCATATTTACGACACGTGGCACTCCTaGTTCTCCTGCAGGAAGCTC +
Preference number: 5 (lower is better)
Translates to: LQANHTWNRFCQTSLHIYDTWHS*FSCRKL
Trigger: GAGCTTCCTGCAGGAGAACAAGGAGTGCCACGTGTC...GTAAATATGCAGTGAGGTTTGGCAAAATCTATTCCATGTGTGATTTGCTTGTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
CDS-3UTR CAA 90 bp AGCAAAACACCACTAAACGTGAACAAGAGAACAGTACATCCGATTTCCAAAGGCCAGCACCACATCTATTaGGTCTTCAGGGATCAGCGA +
Preference number: 5 (lower is better)
Translates to: SKTPLNVNKRTVHPISKGQHHIY*VFRDQR
Trigger: TCGCTGATCCCTGAAGACCAAATAGATGTGGTGCTG...GCCTTTGGAAATCGGATGTACTGTTCTCTTGTTCACGTTTAGTGGTGTTTTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
CDS-3UTR CAA 90 bp ATGCAATTCTCCATTGCCAAAAGAGAATCCTACTGTTTCACAAACCTCAGCTACAGCTGCAGGTTCTCCTaGAGTTGCTTCCATGAGCCA +
Preference number: 5 (lower is better)
Translates to: MQFSIAKRESYCFTNLSYSCRFS*SCFHEP
Trigger: TGGCTCATGGAAGCAACTCAAGGAGAACCTGCAGCT...GTAGCTGAGGTTTGTGAAACAGTAGGATTCTCTTTTGGCAATGGAGAATTGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255006.12
ENST00000440354.2
ENST00000648440.1
CDS-3UTR CAA 90 bp CGCACTGCATCGCAAGCATCTGCTGTTGAATTCAAAAGAACTTGTATCTTAAGTAGCTGCAGGTTCTCCTaGAGTTGCTTCCATGAGCCA +
Preference number: 5 (lower is better)
Translates to: RTASQASAVEFKRTCILSSCRFS*SCFHEP
Trigger: TGGCTCATGGAAGCAACTCAAGGAGAACCTGCAGCT...ACTTAAGATACAAGTTCTTTTGAATTCAACAGCAGATGCTTGCGATGCAGTGCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255006.12
ENST00000440354.2
ENST00000648440.1
CDS-3UTR CAA 90 bp CTACAAGCAAATCACACATGGAATAGATTTTGCCAAACCTCACTGCATATTTACTTGCCCTTGGCCGAGTaGGCCTGTGGATGGCTTAGT +
Preference number: 5 (lower is better)
Translates to: LQANHTWNRFCQTSLHIYLPLAE*ACGWLS
Trigger: ACTAAGCCATCCACAGGCCAACTCGGCCAAGGGCAA...GTAAATATGCAGTGAGGTTTGGCAAAATCTATTCCATGTGTGATTTGCTTGTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
CDS TCA 90 bp TTTTTAACTGGAAATATAGTCCCTGTTAGGCAGAGTTCCTGCCTATaGTTCCTTAGAGAAGCCGCGATGCGTACATTGGTTCTACCTCCT +
Preference number: 5 (lower is better)
Translates to: FLTGNIVPVRQSSCL*FLREAAMRTLVLPP
Trigger: AGGAGGTAGAACCAATGTACGCATCGCGGCTTCTCTAAGGAATCATAGGCAGGAACTCTGCCTAACAGGGACTATATTTCCAGTTAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000616029.2
CDS-3UTR CAA 90 bp CCAGCAGACTGCACTCCTCAGTCCTTTGTTAGAGTTCATATTTCTCTCTCTACCGCTACGTTCCCATGTTaGTTATGGTTGACTGTTTCT +
Preference number: 5 (lower is better)
Translates to: PADCTPQSFVRVHISLSTATFPC*LWLTVS
Trigger: AGAAACAGTCAACCATAACAAACATGGGAACGTAGC...GGTAGAGAGAGAAATATGAACTCTAACAAAGGACTGAGGAGTGCAGTCTGCTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
CDS-3UTR CAA 90 bp CAATTCTCCATTGCCAAAAGAGAATCCTACTGTTTCACAAACCTCAGCTACCTTGGCTTCAAGATGCACTaGTGCATGGCTTTTTCCAGC +
Preference number: 5 (lower is better)
Translates to: QFSIAKRESYCFTNLSYLGFKMH*CMAFSS
Trigger: GCTGGAAAAAGCCATGCACAAGTGCATCTTGAAGCC...AAGGTAGCTGAGGTTTGTGAAACAGTAGGATTCTCTTTTGGCAATGGAGAATTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000255006.12
ENST00000440354.2
ENST00000648440.1
CDS-3UTR CAA 90 bp AGCAAAACACCACTAAACGTGAACAAGAGAACAGTACATCCGATTTCCAAAGGCGTGCTCCATATGCGCTaGTCAAGTAATAGCCTCCTT +
Preference number: 5 (lower is better)
Translates to: SKTPLNVNKRTVHPISKGVLHMR*SSNSLL
Trigger: AAGGAGGCTATTACTTGACAAGCGCATATGGAGCAC...GCCTTTGGAAATCGGATGTACTGTTCTCTTGTTCACGTTTAGTGGTGTTTTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
CDS-3UTR CAA 90 bp CATCTTTTGAAGAGCCTGAACCAGCAGACTGCACTCCTCAGTCCTTTGTTAGAGCGCTGCTTGTTCTTCTaGGAAATTCTTTATCAGAGA +
Preference number: 5 (lower is better)
Translates to: HLLKSLNQQTALLSPLLERCLFF*EILYQR
Trigger: TCTCTGATAAAGAATTTCCAAGAAGAACAAGCAGCG...CTCTAACAAAGGACTGAGGAGTGCAGTCTGCTGGTTCAGGCTCTTCAAAAGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
CDS-3UTR CAA 90 bp TTGTTAGAGTTCATATTTCTCTCTCTACCTCTCTCTACATTCATTTCTCTCCTTGCTTCCAGCTCCCCTTaGGATGCACCACTGGGAAGT +
Preference number: 5 (lower is better)
Translates to: LLEFIFLSLPLSTFISLLASSSP*DAPLGS
Trigger: ACTTCCCAGTGGTGCATCCAAAGGGGAGCTGGAAGC...AAGGAGAGAAATGAATGTAGAGAGAGGTAGAGAGAGAAATATGAACTCTAACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
CDS-3UTR CAA 90 bp CAATTCTCCATTGCCAAAAGAGAATCCTACTGTTTCACAAACCTCAGCTACCTTGTGCTCCATATGCGCTaGTCAAGTAATAGCCTCCTT +
Preference number: 5 (lower is better)
Translates to: QFSIAKRESYCFTNLSYLVLHMR*SSNSLL
Trigger: AAGGAGGCTATTACTTGACAAGCGCATATGGAGCAC...AAGGTAGCTGAGGTTTGTGAAACAGTAGGATTCTCTTTTGGCAATGGAGAATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255006.12
ENST00000440354.2
ENST00000648440.1
CDS-3UTR CAA 90 bp AGCAAAACACCACTAAACGTGAACAAGAGAACAGTACATCCGATTTCCAAAGGCTCTCTCCCCACAAAGTaGCCAAAACATCCAGTTACA +
Preference number: 5 (lower is better)
Translates to: SKTPLNVNKRTVHPISKGSLPTK*PKHPVT
Trigger: TGTAACTGGATGTTTTGGCAACTTTGTGGGGAGAGA...GCCTTTGGAAATCGGATGTACTGTTCTCTTGTTCACGTTTAGTGGTGTTTTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
CDS-3UTR CAA 90 bp CTACAAGCAAATCACACATGGAATAGATTTTGCCAAACCTCACTGCATATTTACGGACACTGCAAACATTaGGGAGCTGCCAAGCCCTTT +
Preference number: 5 (lower is better)
Translates to: LQANHTWNRFCQTSLHIYGHCKH*GAAKPF
Trigger: AAAGGGCTTGGCAGCTCCCAAATGTTTGCAGTGTCC...GTAAATATGCAGTGAGGTTTGGCAAAATCTATTCCATGTGTGATTTGCTTGTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648440.1
CDS-3UTR CAA 90 bp CGCACTGCATCGCAAGCATCTGCTGTTGAATTCAAAAGAACTTGTATCTTAAGTTTTATGGCAAATTCCTaGAGTGGGGCCCCAAATTCA +
Preference number: 5 (lower is better)
Translates to: RTASQASAVEFKRTCILSFMANS*SGAPNS
Trigger: TGAATTTGGGGCCCCACTCAAGGAATTTGCCATAAA...ACTTAAGATACAAGTTCTTTTGAATTCAACAGCAGATGCTTGCGATGCAGTGCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000255006.12
ENST00000440354.2
ENST00000648440.1
CDS-3UTR CAA 90 bp TGCACTCCTCAGTCCTTTGTTAGAGTTCATATTTCTCTCTCTACCTCTCTCTACACAATCTCAGGACACTaGAACCATCAGATGCAATTC +
Preference number: 5 (lower is better)
Translates to: CTPQSFVRVHISLSTSLYTISGH*NHQMQF
Trigger: GAATTGCATCTGATGGTTCAAGTGTCCTGAGATTGT...GTAGAGAGAGGTAGAGAGAGAAATATGAACTCTAACAAAGGACTGAGGAGTGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
CDS-3UTR CAA 90 bp ATGCAATTCTCCATTGCCAAAAGAGAATCCTACTGTTTCACAAACCTCAGCTACTCTCTCCCCACAAAGTaGCCAAAACATCCAGTTACA +
Preference number: 5 (lower is better)
Translates to: MQFSIAKRESYCFTNLSYSLPTK*PKHPVT
Trigger: TGTAACTGGATGTTTTGGCAACTTTGTGGGGAGAGA...GTAGCTGAGGTTTGTGAAACAGTAGGATTCTCTTTTGGCAATGGAGAATTGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
CDS-3UTR CAA 90 bp CACAGTACAATAACATGTTTTTGTAACTACCTGTGTTACGTGGATACAAGACCCCAAGACCCTCATAGTTaGTGCACCTGCAAACTGGTT +
Preference number: 5 (lower is better)
Translates to: HSTITCFCNYLCYVDTRPQDPHS*CTCKLV
Trigger: AACCAGTTTGCAGGTGCACAAACTATGAGGGTCTTG...GGGTCTTGTATCCACGTAACACAGGTAGTTACAAAAACATGTTATTGTACTGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
CDS TCA 90 bp AAGCTTGTTCTTTTCCTGGCTTCCCTGAAGGGTAAAGTGGATTCTTaGGAAAATGAGTCCAACATGTCCAGTAGATGTTTCCAGATACTA +
Preference number: 5 (lower is better)
Translates to: KLVLFLASLKGKVDS*ENESNMSSRCFQIL
Trigger: TAGTATCTGGAAACATCTACTGGACATGTTGGACTCATTTTCTCAAGAATCCACTTTACCCTTCAGGGAAGCCAGGAAAAGAACAAGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648440.1
CDS-3UTR CAA 90 bp TTGTTAGAGTTCATATTTCTCTCTCTACCTCTCTCTACATTCATTTCTCTCCTTCCTCCGACTTGGCTGTaGAAATGGCATAAGGCAACT +
Preference number: 5 (lower is better)
Translates to: LLEFIFLSLPLSTFISLLPPTWL*KWHKAT
Trigger: AGTTGCCTTATGCCATTTCAACAGCCAAGTCGGAGG...AAGGAGAGAAATGAATGTAGAGAGAGGTAGAGAGAGAAATATGAACTCTAACAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
CDS-3UTR CAA 90 bp TTCTACAAGCAAATCACACATGGAATAGATTTTGCCAAACCTCACTGCATATTTGGCTTCAAGATGCACTaGTGCATGGCTTTTTCCAGC +
Preference number: 5 (lower is better)
Translates to: FYKQITHGIDFAKPHCIFGFKMH*CMAFSS
Trigger: GCTGGAAAAAGCCATGCACAAGTGCATCTTGAAGCC...AAATATGCAGTGAGGTTTGGCAAAATCTATTCCATGTGTGATTTGCTTGTAGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
CDS-3UTR CAA 90 bp AGCAAAACACCACTAAACGTGAACAAGAGAACAGTACATCCGATTTCCAAAGGCGTCATGAACTTGACTTaGATTTTCTCCACATCCACA +
Preference number: 5 (lower is better)
Translates to: SKTPLNVNKRTVHPISKGVMNLT*IFSTST
Trigger: TGTGGATGTGGAGAAAATCAAAGTCAAGTTCATGAC...GCCTTTGGAAATCGGATGTACTGTTCTCTTGTTCACGTTTAGTGGTGTTTTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
CDS-3UTR CAA 90 bp CTACAAGCAAATCACACATGGAATAGATTTTGCCAAACCTCACTGCATATTTACGAGCAGTCGCGCTGCTaGTTCTTCTTGGAAATTCTT +
Preference number: 5 (lower is better)
Translates to: LQANHTWNRFCQTSLHIYEQSRC*FFLEIL
Trigger: AAGAATTTCCAAGAAGAACAAGCAGCGCGACTGCTC...GTAAATATGCAGTGAGGTTTGGCAAAATCTATTCCATGTGTGATTTGCTTGTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
CDS-3UTR CAA 90 bp ATGCAATTCTCCATTGCCAAAAGAGAATCCTACTGTTTCACAAACCTCAGCTACGTCATGAACTTGACTTaGATTTTCTCCACATCCACA +
Preference number: 5 (lower is better)
Translates to: MQFSIAKRESYCFTNLSYVMNLT*IFSTST
Trigger: TGTGGATGTGGAGAAAATCAAAGTCAAGTTCATGAC...GTAGCTGAGGTTTGTGAAACAGTAGGATTCTCTTTTGGCAATGGAGAATTGCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255006.12
ENST00000440354.2
ENST00000648440.1
CDS-3UTR CAA 90 bp CGCACTGCATCGCAAGCATCTGCTGTTGAATTCAAAAGAACTTGTATCTTAAGTCGCTGCTTGTTCTTCTaGGAAATTCTTTATCAGAGA +
Preference number: 5 (lower is better)
Translates to: RTASQASAVEFKRTCILSRCLFF*EILYQR
Trigger: TCTCTGATAAAGAATTTCCAAGAAGAACAAGCAGCG...ACTTAAGATACAAGTTCTTTTGAATTCAACAGCAGATGCTTGCGATGCAGTGCG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255006.12
ENST00000440354.2
ENST00000648440.1
CDS-3UTR CAA 90 bp TTGTTAGAGTTCATATTTCTCTCTCTACCTCTCTCTACATTCATTTCTCTCCTTCAAGACCCTCATAGTTaGTGCACCTGCAAACTGGTT +
Preference number: 5 (lower is better)
Translates to: LLEFIFLSLPLSTFISLLQDPHS*CTCKLV
Trigger: AACCAGTTTGCAGGTGCACAAACTATGAGGGTCTTG...AAGGAGAGAAATGAATGTAGAGAGAGGTAGAGAGAGAAATATGAACTCTAACAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
CDS-3UTR CAA 90 bp CAATTCTCCATTGCCAAAAGAGAATCCTACTGTTTCACAAACCTCAGCTACCTTTTTTCCAGCACCACATaGTATGTGCTTTCCTTTATG +
Preference number: 5 (lower is better)
Translates to: QFSIAKRESYCFTNLSYLFSSTT*YVLSFM
Trigger: CATAAAGGAAAGCACATACAATGTGGTGCTGGAAAA...AAGGTAGCTGAGGTTTGTGAAACAGTAGGATTCTCTTTTGGCAATGGAGAATTG
40% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000440354.2
CDS-3UTR CAA 90 bp TTCTACAAGCAAATCACACATGGAATAGATTTTGCCAAACCTCACTGCATATTTCCAGACTTGTACCGGTaGGAAGCTTGTTCTTTTCCT +
Preference number: 5 (lower is better)
Translates to: FYKQITHGIDFAKPHCIFPDLYR*EACSFP
Trigger: AGGAAAAGAACAAGCTTCCAACCGGTACAAGTCTGG...AAATATGCAGTGAGGTTTGGCAAAATCTATTCCATGTGTGATTTGCTTGTAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648440.1
CDS-3UTR CAA 90 bp CTACAAGCAAATCACACATGGAATAGATTTTGCCAAACCTCACTGCATATTTACACAATCTCAGGACACTaGAACCATCAGATGCAATTC +
Preference number: 5 (lower is better)
Translates to: LQANHTWNRFCQTSLHIYTISGH*NHQMQF
Trigger: GAATTGCATCTGATGGTTCAAGTGTCCTGAGATTGT...GTAAATATGCAGTGAGGTTTGGCAAAATCTATTCCATGTGTGATTTGCTTGTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255006.12
ENST00000648440.1
CDS CCA 90 bp TTCCTAAATCTTAGCGTCCTCCTCATAAACATCATTGAAATAAACTaGGGATCCATTTCAGCATTTTTAACTGGAAATATAGTCCCTGTT +
Preference number: 5 (lower is better)
Translates to: FLNLSVLLINIIEIN*GSISAFLTGNIVPV
Trigger: AACAGGGACTATATTTCCAGTTAAAAATGCTGAAATGGATCCCCAGTTTATTTCAATGATGTTTATGAGGAGGACGCTAAGATTTAGGAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000616029.2
CDS TCA 72 bp GCTCAGCCGCTGCCGGCCTCCATGGCACGGGGGCCGTaGTTCAGAGCTGGGCGGCGGGGCCCTTGTGCAATC +
Preference number: 6 (lower is better)
Translates to: AQPLPASMARGP*FRAGRRGPCAI
Trigger: GATTGCACAAGGGCCCCGCCGCCCAGCTCTGAATCACGGCCCCCGTGCCATGGAGGCCGGCAGCGGCTGAGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000255006.12
ENST00000484638.1
ENST00000648440.1
CDS CCA 72 bp GAAATGCTCATGTCGCTCAGCCGCTGCCGGCCTCCATaGCACGGGGGCCGTGATTCAGAGCTGGGCGGCGGG +
Preference number: 6 (lower is better)
Translates to: EMLMSLSRCRPP*HGGRDSELGGG
Trigger: CCCGCCGCCCAGCTCTGAATCACGGCCCCCGTGCCATGGAGGCCGGCAGCGGCTGAGCGACATGAGCATTTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000255006.12
ENST00000484638.1
ENST00000648440.1
CDS CAA 72 bp CCGGGCCTGCGCCCGGCCGGCCGCCGCTCAAGGTCTTaGCACCGCCCTCTGCTTCCAGAAAAGAAGCCTGCT +
Preference number: 6 (lower is better)
Translates to: PGLRPAGRRSRS*HRPLLPEKKPA
Trigger: AGCAGGCTTCTTTTCTGGAAGCAGAGGGCGGTGCAAAGACCTTGAGCGGCGGCCGGCCGGGCGCAGGCCCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255006.12
ENST00000484638.1
ENST00000648440.1
CDS GCA 72 bp CGGGCCTGCGCCCGGCCGGCCGCCGCTCAAGGTCTTTaGACCGCCCTCTGCTTCCAGAAAAGAAGCCTGCTT +
Preference number: 6 (lower is better)
Translates to: RACARPAAAQGL*TALCFQKRSLL
Trigger: AAGCAGGCTTCTTTTCTGGAAGCAGAGGGCGGTGCAAAGACCTTGAGCGGCGGCCGGCCGGGCGCAGGCCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255006.12
ENST00000484638.1
ENST00000648440.1
CDS TCA 72 bp TATCTAAGCCGGAGCAAACTTGGCTGGACCGGCCCCTaGCCCGCCTTGGCGCTGCCGCCCCTGTCTTCTGCG +
Preference number: 6 (lower is better)
Translates to: YLSRSKLGWTGP*PALALPPLSSA
Trigger: CGCAGAAGACAGGGGCGGCAGCGCCAAGGCGGGTCAGGGGCCGGTCCAGCCAAGTTTGCTCCGGCTTAGATA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000432334.2
ENST00000616029.2
ENST00000648165.1
CDS GCA 72 bp CGGCCGGCCGCCGCTCAAGGTCTTTGCACCGCCCTCTaGTTCCAGAAAAGAAGCCTGCTTCTTCAGCCGGGG +
Preference number: 6 (lower is better)
Translates to: RPAAAQGLCTAL*FQKRSLLLQPG
Trigger: CCCCGGCTGAAGAAGCAGGCTTCTTTTCTGGAAGCAGAGGGCGGTGCAAAGACCTTGAGCGGCGGCCGGCCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255006.12
ENST00000484638.1
ENST00000648440.1
CDS CCA 72 bp GCTGGCTCAGAGAGCAGACTTCCCTCAGCAGCTCCATaGAGCACCGCAGCTCCCAGGCTCAGGCAGCAAGCC +
Preference number: 6 (lower is better)
Translates to: AGSESRLPSAAP*STAAPRLRQQA
Trigger: GGCTTGCTGCCTGAGCCTGGGAGCTGCGGTGCTCCATGGAGCTGCTGAGGGAAGTCTGCTCTCTGAGCCAGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000432334.2
ENST00000648165.1
CDS GCA 72 bp ATCAGCAGCTGGGCTCGGGCAAGCTCCCTTAGCCGGTaGTGGCTCAGAGAGCAGACTTCCCTCAGCAGCTCC +
Preference number: 6 (lower is better)
Translates to: ISSWARASSLSR*WLREQTSLSSS
Trigger: GGAGCTGCTGAGGGAAGTCTGCTCTCTGAGCCAGCACCGGCTAAGGGAGCTTGCCCGAGCCCAGCTGCTGAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000432334.2
ENST00000648165.1
CDS CCA 72 bp AGCAGCTGGGCTCGGGCAAGCTCCCTTAGCCGGTGCTaGCTCAGAGAGCAGACTTCCCTCAGCAGCTCCATG +
Preference number: 6 (lower is better)
Translates to: SSWARASSLSRC*LREQTSLSSSM
Trigger: CATGGAGCTGCTGAGGGAAGTCTGCTCTCTGAGCCAGCACCGGCTAAGGGAGCTTGCCCGAGCCCAGCTGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000432334.2
ENST00000648165.1
CDS GCA 72 bp GTCGGGGCGAAGACCCCCAGCTCCTGCGGATTCCTCTaGCGCACAAGCTGCAGGTTCTCCTTGAGTTGCTTC +
Preference number: 6 (lower is better)
Translates to: VGAKTPSSCGFL*RTSCRFSLSCF
Trigger: GAAGCAACTCAAGGAGAACCTGCAGCTTGTGCGGCAGAGGAATCCGCAGGAGCTGGGGGTCTTCGCCCCGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000255006.12
ENST00000440354.2
ENST00000484638.1
ENST00000648440.1
CDS CCA 72 bp AGAAACTTCCTCGCTTGTCCAGACCGCGGGCGCCCATaGTCCAAGCTGTCATTTCCCCCAGCGAGGCTCCAC +
Preference number: 6 (lower is better)
Translates to: RNFLACPDRGRP*SKLSFPPARLH
Trigger: GTGGAGCCTCGCTGGGGGAAATGACAGCTTGGACCATGGGCGCCCGCGGTCTGGACAAGCGAGGAAGTTTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000255006.12
ENST00000432334.2
ENST00000440354.2
ENST00000459721.5
ENST00000465815.1
ENST00000467569.5
ENST00000488077.1
ENST00000648165.1
ENST00000648440.1
CDS CCA 72 bp GTCTGGGTTTCAGTCCTGGCCAGCCGAGGGCTTGTGTaGAGACTATTAATAGCGGGTGGCGGGGGCCTGGGT +
Preference number: 6 (lower is better)
Translates to: VWVSVLASRGLV*RLLIAGGGGLG
Trigger: ACCCAGGCCCCCGCCACCCGCTATTAATAGTCTCCACACAAGCCCTCGGCTGGCCAGGACTGAAACCCAGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000255006.12
ENST00000484638.1
ENST00000648440.1
CDS GCA 72 bp CTCCCCTTCACGCCAGCATCTCTTCTCCTCTCCCACTaGAGTTCAGCCCAACCTCCCCAGCGTTCTGAAGGG +
Preference number: 6 (lower is better)
Translates to: LPFTPASLLLSH*SSAQPPQRSEG
Trigger: CCCTTCAGAACGCTGGGGAGGTTGGGCTGAACTGCAGTGGGAGAGGAGAAGAGATGCTGGCGTGAAGGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255006.12
CDS GCA 72 bp TGCTGTTGGTGTCCGCCTCGTAGCCAAACAGAGGCATaGTCCGGTCGAACTCCAGCGAGTCGGAGGAGGAAG +
Preference number: 6 (lower is better)
Translates to: CCWCPPRSQTEA*SGRTPASRRRK
Trigger: CTTCCTCCTCCGACTCGCTGGAGTTCGACCGGAGCATGCCTCTGTTTGGCTACGAGGCGGACACCAACAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255006.12
ENST00000484638.1
ENST00000648440.1
CDS GCA 72 bp GGGGTCATGAAGGAGCTGAACACCCCGCTCACCTTCTaGAGCTGGGACTTGACGAGCTTGGGCAGCACGAAG +
Preference number: 6 (lower is better)
Translates to: GVMKELNTPLTF*SWDLTSLGSTK
Trigger: CTTCGTGCTGCCCAAGCTCGTCAAGTCCCAGCTGCAGAAGGTGAGCGGGGTGTTCAGCTCCTTCATGACCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255006.12
ENST00000484638.1
ENST00000648440.1
CDS GCA 72 bp GAAGCGGGAAGGCAAGGCTTCCAGCTCCCCTTTGGATaGACCACTGGGAAGTCCCGCCTGTCTTCTAGGAGG +
Preference number: 6 (lower is better)
Translates to: EAGRQGFQLPFG*TTGKSRLSSRR
Trigger: CCTCCTAGAAGACAGGCGGGACTTCCCAGTGGTGCATCCAAAGGGGAGCTGGAAGCCTTGCCTTCCCGCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255006.12
ENST00000440354.2
ENST00000484638.1
ENST00000648440.1
CDS GCA 72 bp CAGCCCTTCACGCCAGCATCTCTTCTCCTCTCCCACTaGAGTTCAGCCCAACCTCCCCAGCGTTCTGAAGGG +
Preference number: 6 (lower is better)
Translates to: QPFTPASLLLSH*SSAQPPQRSEG
Trigger: CCCTTCAGAACGCTGGGGAGGTTGGGCTGAACTGCAGTGGGAGAGGAGAAGAGATGCTGGCGTGAAGGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412571.1
ENST00000426012.1
CDS CCA 72 bp GAGGCAGGACAGACACCGTCGGAGGAAAGAGGCCTATaGGGAGGTGGAAGGTTCGGGGGTTTGCTGTCAGCT +
Preference number: 6 (lower is better)
Translates to: EAGQTPSEERGL*GGGRFGGLLSA
Trigger: AGCTGACAGCAAACCCCCGAACCTTCCACCTCCCCATAGGCCTCTTTCCTCCGACGGTGTCTGTCCTGCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000255006.12
ENST00000484638.1
ENST00000648440.1
CDS CCA 72 bp GGTCACTTTCCCCCTCGTAGTCCTCCAGGCTGCTGTTaGTGTCCGCCTCGTAGCCAAACAGAGGCATGCTCC +
Preference number: 6 (lower is better)
Translates to: GHFPPRSPPGCC*CPPRSQTEACS
Trigger: GGAGCATGCCTCTGTTTGGCTACGAGGCGGACACCAACAGCAGCCTGGAGGACTACGAGGGGGAAAGTGACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000255006.12
ENST00000484638.1
ENST00000648440.1
CDS CCA 72 bp CTGCCATCAGAAAGTTTATCTAAGCCGGAGCAAACTTaGCTGGACCGGCCCCTGACCCGCCTTGGCGCTGCC +
Preference number: 6 (lower is better)
Translates to: LPSESLSKPEQT*LDRPLTRLGAA
Trigger: GGCAGCGCCAAGGCGGGTCAGGGGCCGGTCCAGCCAAGTTTGCTCCGGCTTAGATAAACTTTCTGATGGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000432334.2
ENST00000616029.2
ENST00000648165.1
CDS CAA 72 bp CTGAGCAGCTCTCAAATAAAGACAGCCTCAGCCGTCTaGCACAGCACGGCCCCTCTCCGTGCCCGAGTCCTG +
Preference number: 6 (lower is better)
Translates to: LSSSQIKTASAV*HSTAPLRARVL
Trigger: CAGGACTCGGGCACGGAGAGGGGCCGTGCTGTGCAAGACGGCTGAGGCTGTCTTTATTTGAGAGCTGCTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000432334.2
ENST00000648165.1
CDS TCA 72 bp ATATGGGGTGGGTGTGGAGGAGCCGGTCCAAGATGCTaGGCCTGTTGGAGAGGCTGTCATAGCCTGAGTCCC +
Preference number: 6 (lower is better)
Translates to: IWGGCGGAGPRC*ACWRGCHSLSP
Trigger: GGGACTCAGGCTATGACAGCCTCTCCAACAGGCTCAGCATCTTGGACCGGCTCCTCCACACCCACCCCATAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000255006.12
ENST00000440354.2
ENST00000459721.5
ENST00000467569.5
ENST00000484638.1
ENST00000648440.1
CDS GCA 72 bp TACCCCTTCACGCCAGCATCTCTTCTCCTCTCCCACTaGAGTTCAGCCCAACCTCCCCAGCGTTCTGAAGGG +
Preference number: 6 (lower is better)
Translates to: YPFTPASLLLSH*SSAQPPQRSEG
Trigger: CCCTTCAGAACGCTGGGGAGGTTGGGCTGAACTGCAGTGGGAGAGGAGAAGAGATGCTGGCGTGAAGGGGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432334.2
CDS GCA 72 bp TGGTCCAAGCTGTCATTTCCCCCAGCGAGGCTCCACTaGACGCCGGGGACTCATCTCCCTTCAGCCCAATTT +
Preference number: 6 (lower is better)
Translates to: WSKLSFPPARLH*TPGTHLPSAQF
Trigger: AAATTGGGCTGAAGGGAGATGAGTCCCCGGCGTGCAGTGGAGCCTCGCTGGGGGAAATGACAGCTTGGACCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000459721.5
ENST00000467569.5
CDS GCA 72 bp ATCCCCTTCACGCCAGCATCTCTTCTCCTCTCCCACTaGAGTTCAGCCCAACCTCCCCAGCGTTCTGAAGGG +
Preference number: 6 (lower is better)
Translates to: IPFTPASLLLSH*SSAQPPQRSEG
Trigger: CCCTTCAGAACGCTGGGGAGGTTGGGCTGAACTGCAGTGGGAGAGGAGAAGAGATGCTGGCGTGAAGGGGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648165.1
CDS TCA 72 bp CAAGATGCTGAGCCTGTTGGAGAGGCTGTCATAGCCTaGGTCCCGGGCACAGGTCTTCACGTCCTCTTCCTC +
Preference number: 6 (lower is better)
Translates to: QDAEPVGEAVIA*VPGTGLHVLFL
Trigger: GAGGAAGAGGACGTGAAGACCTGTGCCCGGGACTCAGGCTATGACAGCCTCTCCAACAGGCTCAGCATCTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000255006.12
ENST00000440354.2
ENST00000459721.5
ENST00000467569.5
ENST00000484638.1
ENST00000648440.1
CDS GCA 72 bp TCTCTTGGTCACTTTCCCCCTCGTAGTCCTCCAGGCTaGTGTTGGTGTCCGCCTCGTAGCCAAACAGAGGCA +
Preference number: 6 (lower is better)
Translates to: SLGHFPPRSPPG*CWCPPRSQTEA
Trigger: TGCCTCTGTTTGGCTACGAGGCGGACACCAACAGCAGCCTGGAGGACTACGAGGGGGAAAGTGACCAAGAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000255006.12
ENST00000484638.1
ENST00000648440.1
CDS GCA 72 bp AGCTCACGTAGTCCTGCACTAAGCACCCGAAGTAGGTaGATTTGTCCCGGGAAAGCTCGGCGATCCTGCGGA +
Preference number: 6 (lower is better)
Translates to: SSRSPALSTRSR*ICPGKARRSCG
Trigger: TCCGCAGGATCGCCGAGCTTTCCCGGGACAAATGCACCTACTTCGGGTGCTTAGTGCAGGACTACGTGAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255006.12
ENST00000484638.1
ENST00000648440.1
CDS GCA 72 bp GGGATGGTCCGGTTGGTGGTTCTCCGTTTGTGCCACTaGCTCAGGGTGTCTCTGGTTTCTGAGCTGAGCAGT +
Preference number: 6 (lower is better)
Translates to: GMVRLVVLRLCH*LRVSLVSELSS
Trigger: ACTGCTCAGCTCAGAAACCAGAGACACCCTGAGGCAGTGGCACAAACGGAGAACCACCAACCGGACCATCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255006.12
ENST00000440354.2
ENST00000484638.1
ENST00000648440.1
CDS GCA 72 bp ACAGAGGGGATGGTCCGGTTGGTGGTTCTCCGTTTGTaGCACTGCCTCAGGGTGTCTCTGGTTTCTGAGCTG +
Preference number: 6 (lower is better)
Translates to: TEGMVRLVVLRL*HCLRVSLVSEL
Trigger: CAGCTCAGAAACCAGAGACACCCTGAGGCAGTGGCACAAACGGAGAACCACCAACCGGACCATCCCCTCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255006.12
ENST00000440354.2
ENST00000484638.1
ENST00000648440.1
CDS GCA 72 bp TGGTCCAAGCTGTCATTTCCCCCAGCGAGGCTCCACTaGACGCCGGGGACTCCTGGCGAGAGTATCATTTTT +
Preference number: 6 (lower is better)
Translates to: WSKLSFPPARLH*TPGTPGESIIF
Trigger: AAAAATGATACTCTCGCCAGGAGTCCCCGGCGTGCAGTGGAGCCTCGCTGGGGGAAATGACAGCTTGGACCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000648165.1
CDS CCA 72 bp CTCGGAGGTAATTCTGGAAGTCGTCCACAGAGGGGATaGTCCGGTTGGTGGTTCTCCGTTTGTGCCACTGCC +
Preference number: 6 (lower is better)
Translates to: LGGNSGSRPQRG*SGWWFSVCATA
Trigger: GGCAGTGGCACAAACGGAGAACCACCAACCGGACCATCCCCTCTGTGGACGACTTCCAGAATTACCTCCGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255006.12
ENST00000440354.2
ENST00000484638.1
ENST00000648440.1
CDS CAA 72 bp GGGCTGTGGTCGGCTGTGCAGCTCCGCCTTGATTTTTaGAGGGTAAGTGTCCTCTGCCAGCTGCTGCCATGT +
Preference number: 6 (lower is better)
Translates to: GLWSAVQLRLDF*RVSVLCQLLPC
Trigger: ACATGGCAGCAGCTGGCAGAGGACACTTACCCTCAAAAAATCAAGGCGGAGCTGCACAGCCGACCACAGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000255006.12
ENST00000440354.2
ENST00000484638.1
ENST00000648440.1
CDS CAA 90 bp GAAGATGTGGGGCTGTGGTCGGCTGTGCAGCTCCGCCTTGATTTTTaGAGGGTAAGTGTCCTCTGCCAGCTGCTGCCATGTCTCGTCAAC +
Preference number: 6 (lower is better)
Translates to: EDVGLWSAVQLRLDF*RVSVLCQLLPCLVN
Trigger: GTTGACGAGACATGGCAGCAGCTGGCAGAGGACACTTACCCTCAAAAAATCAAGGCGGAGCTGCACAGCCGACCACAGCCCCACATCTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000255006.12
ENST00000440354.2
ENST00000484638.1
ENST00000648440.1
CDS CAA 90 bp AAGGACAAACTGAGCAGCTCTCAAATAAAGACAGCCTCAGCCGTCTaGCACAGCACGGCCCCTCTCCGTGCCCGAGTCCTGTGCCTGTAT +
Preference number: 6 (lower is better)
Translates to: KDKLSSSQIKTASAV*HSTAPLRARVLCLY
Trigger: ATACAGGCACAGGACTCGGGCACGGAGAGGGGCCGTGCTGTGCAAGACGGCTGAGGCTGTCTTTATTTGAGAGCTGCTCAGTTTGTCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000432334.2
ENST00000648165.1
CDS GCA 72 bp TGGTCCAAGCTGTCATTTCCCCCAGCGAGGCTCCACTaGACGCCGGGGACTCCTGAAGGTAGAGACATTTTT +
Preference number: 6 (lower is better)
Translates to: WSKLSFPPARLH*TPGTPEGRDIF
Trigger: AAAAATGTCTCTACCTTCAGGAGTCCCCGGCGTGCAGTGGAGCCTCGCTGGGGGAAATGACAGCTTGGACCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000488077.1
CDS CCA 72 bp AGCCTGCTTCTTCAGCCGGGGTGGAGGGATGGGAGTTaGTTTCGTTCCAGGCAGAGCTACGTTCCCATGTTT +
Preference number: 6 (lower is better)
Translates to: SLLLQPGWRDGS*FRSRQSYVPMF
Trigger: AAACATGGGAACGTAGCTCTGCCTGGAACGAAACCAACTCCCATCCCTCCACCCCGGCTGAAGAAGCAGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255006.12
ENST00000484638.1
ENST00000648440.1
CDS CCA 72 bp GAAAAGAAGCCTGCTTCTTCAGCCGGGGTGGAGGGATaGGAGTTGGTTTCGTTCCAGGCAGAGCTACGTTCC +
Preference number: 6 (lower is better)
Translates to: EKKPASSAGVEG*ELVSFQAELRS
Trigger: GGAACGTAGCTCTGCCTGGAACGAAACCAACTCCCATCCCTCCACCCCGGCTGAAGAAGCAGGCTTCTTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255006.12
ENST00000484638.1
ENST00000648440.1
CDS CCA 72 bp TGCTTCCAGAAAAGAAGCCTGCTTCTTCAGCCGGGGTaGAGGGATGGGAGTTGGTTTCGTTCCAGGCAGAGC +
Preference number: 6 (lower is better)
Translates to: CFQKRSLLLQPG*RDGSWFRSRQS
Trigger: GCTCTGCCTGGAACGAAACCAACTCCCATCCCTCCACCCCGGCTGAAGAAGCAGGCTTCTTTTCTGGAAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255006.12
ENST00000484638.1
ENST00000648440.1
CDS CCA 72 bp AATTCTGGAAGTCGTCCACAGAGGGGATGGTCCGGTTaGTGGTTCTCCGTTTGTGCCACTGCCTCAGGGTGT +
Preference number: 6 (lower is better)
Translates to: NSGSRPQRGWSG*WFSVCATASGC
Trigger: ACACCCTGAGGCAGTGGCACAAACGGAGAACCACCAACCGGACCATCCCCTCTGTGGACGACTTCCAGAATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255006.12
ENST00000440354.2
ENST00000484638.1
ENST00000648440.1
CDS CAA 72 bp AAGCCTGCTTCTTCAGCCGGGGTGGAGGGATGGGAGTaGGTTTCGTTCCAGGCAGAGCTACGTTCCCATGTT +
Preference number: 6 (lower is better)
Translates to: KPASSAGVEGWE*VSFQAELRSHV
Trigger: AACATGGGAACGTAGCTCTGCCTGGAACGAAACCAACTCCCATCCCTCCACCCCGGCTGAAGAAGCAGGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255006.12
ENST00000484638.1
ENST00000648440.1
CDS TCA 72 bp CCGCACAAGCTGCAGGTTCTCCTTGAGTTGCTTCCATaGGCCATCGGCCATGTGAAAGTCCTTCAGCATGGC +
Preference number: 6 (lower is better)
Translates to: PHKLQVLLELLP*AIGHVKVLQHG
Trigger: GCCATGCTGAAGGACTTTCACATGGCCGATGGCTCATGGAAGCAACTCAAGGAGAACCTGCAGCTTGTGCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255006.12
ENST00000440354.2
ENST00000484638.1
ENST00000648440.1
CDS CAA 90 bp TTCCGGGTTCTGTGGGTTTCAGCGGGTTCCAGGCCATTTTCCAGGTaGACATCTGTCCGCACCATCTCCTGTTTCAGTTCTCCGATCTCC +
Preference number: 6 (lower is better)
Translates to: FRVLWVSAGSRPFSR*TSVRTISCFSSPIS
Trigger: GGAGATCGGAGAACTGAAACAGGAGATGGTGCGGACAGATGTCAACCTGGAAAATGGCCTGGAACCCGCTGAAACCCACAGAACCCGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000467569.5
ENST00000488077.1
CDS CAA 90 bp CGCCGGGGACTCCGTAGTTTGAGAGGCTGTGAAATTCCTCCAGACTaGTACCGGTTGGAAGCTTGTTCTTTTCCTGGCTTCCCTGAAGGG +
Preference number: 6 (lower is better)
Translates to: RRGLRSLRGCEIPPD*YRLEACSFPGFPEG
Trigger: CCCTTCAGGGAAGCCAGGAAAAGAACAAGCTTCCAACCGGTACAAGTCTGGAGGAATTTCACAGCCTCTCAAACTACGGAGTCCCCGGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648440.1
CDS CCA 72 bp GGTGTATGTGCTTTCCTTTATGGCAAATTCCTTGAGTaGGGCCCCAAATTCACAGGGCAGGCGGAGGGAGAG +
Preference number: 6 (lower is better)
Translates to: GVCAFLYGKFLE*GPKFTGQAEGE
Trigger: CTCTCCCTCCGCCTGCCCTGTGAATTTGGGGCCCCACTCAAGGAATTTGCCATAAAGGAAAGCACATACACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255006.12
ENST00000467569.5
ENST00000648440.1
CDS CCA 72 bp TGTTTGTTATGGTTGACTGTTTCTGGCATGCTCGTCTaGGTTTCAGTCCTGGCCAGCCGAGGGCTTGTGTGG +
Preference number: 6 (lower is better)
Translates to: CLLWLTVSGMLV*VSVLASRGLVW
Trigger: CCACACAAGCCCTCGGCTGGCCAGGACTGAAACCCAGACGAGCATGCCAGAAACAGTCAACCATAACAAACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255006.12
ENST00000484638.1
ENST00000648440.1
CDS CCA 72 bp CCTGTATGTGCTTTCCTTTATGGCAAATTCCTTGAGTaGGGCCCCAAATTCACAGGGCAGGCGGAGGGAGAG +
Preference number: 6 (lower is better)
Translates to: PVCAFLYGKFLE*GPKFTGQAEGE
Trigger: CTCTCCCTCCGCCTGCCCTGTGAATTTGGGGCCCCACTCAAGGAATTTGCCATAAAGGAAAGCACATACAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484638.1
CDS CAA 72 bp GCAATTGTGTCAATGAGCTTAAAGAAACTTCCTCGCTaGTCCAGACCGCGGGCGCCCATGGTCCAAGCTGTC +
Preference number: 6 (lower is better)
Translates to: AIVSMSLKKLPR*SRPRAPMVQAV
Trigger: GACAGCTTGGACCATGGGCGCCCGCGGTCTGGACAAGCGAGGAAGTTTCTTTAAGCTCATTGACACAATTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000255006.12
ENST00000440354.2
ENST00000459721.5
ENST00000467569.5
ENST00000488077.1
ENST00000648440.1
CDS CAA 72 bp TCAAGGCTTCCTTTTACCTTAAAGAAACTTCCTCGCTaGTCCAGACCGCGGGCGCCCATGGTCCAAGCTGTC +
Preference number: 6 (lower is better)
Translates to: SRLPFTLKKLPR*SRPRAPMVQAV
Trigger: GACAGCTTGGACCATGGGCGCCCGCGGTCTGGACAAGCGAGGAAGTTTCTTTAAGGTAAAAGGAAGCCTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000432334.2
ENST00000648165.1
CDS CAA 90 bp CTTACCATGCTGTGGGTTTCAGCGGGTTCCAGGCCATTTTCCAGGTaGACATCTGTCCGCACCATCTCCTGTTTCAGTTCTCCGATCTCC +
Preference number: 6 (lower is better)
Translates to: LTMLWVSAGSRPFSR*TSVRTISCFSSPIS
Trigger: GGAGATCGGAGAACTGAAACAGGAGATGGTGCGGACAGATGTCAACCTGGAAAATGGCCTGGAACCCGCTGAAACCCACAGCATGGTAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255006.12
ENST00000440354.2
ENST00000459721.5
ENST00000648440.1
CDS CAA 90 bp CCAGAAAAGAAGCCTGCTTCTTCAGCCGGGGTGGAGGGATGGGAGTaGGTTTCGTTCCAGGCAGAGCTACGTTCCCATGTTTGTTATGGT +
Preference number: 6 (lower is better)
Translates to: PEKKPASSAGVEGWE*VSFQAELRSHVCYG
Trigger: ACCATAACAAACATGGGAACGTAGCTCTGCCTGGAACGAAACCAACTCCCATCCCTCCACCCCGGCTGAAGAAGCAGGCTTCTTTTCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255006.12
ENST00000484638.1
ENST00000648440.1
CDS CAA 90 bp AGATCCCAATCAAGGCTTCCTTTTACCTTAAAGAAACTTCCTCGCTaGTCCAGACCGCGGGCGCCCATGGTCCAAGCTGTCATTTCCCCC +
Preference number: 6 (lower is better)
Translates to: RSQSRLPFTLKKLPR*SRPRAPMVQAVISP
Trigger: GGGGGAAATGACAGCTTGGACCATGGGCGCCCGCGGTCTGGACAAGCGAGGAAGTTTCTTTAAGGTAAAAGGAAGCCTTGATTGGGATCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000432334.2
ENST00000648165.1
CDS TCA 72 bp TGTGAAAGTCCTTCAGCATGGCCTCCACGTGCCCCTTaGGGGGCTTCAAGATGCACTTGTGCATGGCTTTTT +
Preference number: 6 (lower is better)
Translates to: CESPSAWPPRAP*GASRCTCAWLF
Trigger: AAAAAGCCATGCACAAGTGCATCTTGAAGCCCCTCAAGGGGCACGTGGAGGCCATGCTGAAGGACTTTCACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000255006.12
ENST00000440354.2
ENST00000484638.1
ENST00000648440.1
CDS TCA 72 bp CCACATTGTATGTGCTTTCCTTTATGGCAAATTCCTTaGGTGGGGCCCCAAATTCACAGGGCAGGCGGAGGG +
Preference number: 6 (lower is better)
Translates to: PHCMCFPLWQIP*VGPQIHRAGGG
Trigger: CCCTCCGCCTGCCCTGTGAATTTGGGGCCCCACTCAAGGAATTTGCCATAAAGGAAAGCACATACAATGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000440354.2
CDS TCA 72 bp ACATCCTGTATGTGCTTTCCTTTATGGCAAATTCCTTaGGTGGGGCCCCAAATTCACAGGGCAGGCGGAGGG +
Preference number: 6 (lower is better)
Translates to: TSCMCFPLWQIP*VGPQIHRAGGG
Trigger: CCCTCCGCCTGCCCTGTGAATTTGGGGCCCCACTCAAGGAATTTGCCATAAAGGAAAGCACATACAGGATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484638.1
CDS CCA 72 bp AGCTACGTTCCCATGTTTGTTATGGTTGACTGTTTCTaGCATGCTCGTCTGGGTTTCAGTCCTGGCCAGCCG +
Preference number: 6 (lower is better)
Translates to: SYVPMFVMVDCF*HARLGFSPGQP
Trigger: CGGCTGGCCAGGACTGAAACCCAGACGAGCATGCCAGAAACAGTCAACCATAACAAACATGGGAACGTAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255006.12
ENST00000484638.1
ENST00000648440.1
CDS CAA 72 bp CTGTGGGTTTCAGCGGGTTCCAGGCCATTTTCCAGGTaGACATCTGTCCGCACCATCTCCTGTTTCAGTTCT +
Preference number: 6 (lower is better)
Translates to: LWVSAGSRPFSR*TSVRTISCFSS
Trigger: AGAACTGAAACAGGAGATGGTGCGGACAGATGTCAACCTGGAAAATGGCCTGGAACCCGCTGAAACCCACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000255006.12
ENST00000440354.2
ENST00000459721.5
ENST00000467569.5
ENST00000484638.1
ENST00000488077.1
ENST00000648440.1
CDS CAA 72 bp TCTTCTGCGGTCCCCGGCCAGGCGAGGACCAGAGTTTaGTTCTCGGAGATTCTTGCCTTTCTTGTTTTAGCA +
Preference number: 6 (lower is better)
Translates to: SSAVPGQARTRV*FSEILAFLVLA
Trigger: TGCTAAAACAAGAAAGGCAAGAATCTCCGAGAACAAAACTCTGGTCCTCGCCTGGCCGGGGACCGCAGAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000432334.2
ENST00000616029.2
ENST00000648165.1
CDS CAA 90 bp GTTGGTTTCGTTCCAGGCAGAGCTACGTTCCCATGTTTGTTATGGTaGACTGTTTCTGGCATGCTCGTCTGGGTTTCAGTCCTGGCCAGC +
Preference number: 6 (lower is better)
Translates to: VGFVPGRATFPCLLW*TVSGMLVWVSVLAS
Trigger: GCTGGCCAGGACTGAAACCCAGACGAGCATGCCAGAAACAGTCAACCATAACAAACATGGGAACGTAGCTCTGCCTGGAACGAAACCAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255006.12
ENST00000484638.1
ENST00000648440.1
CDS CAA 90 bp GGGATGGGAGTTGGTTTCGTTCCAGGCAGAGCTACGTTCCCATGTTaGTTATGGTTGACTGTTTCTGGCATGCTCGTCTGGGTTTCAGTC +
Preference number: 6 (lower is better)
Translates to: GMGVGFVPGRATFPC*LWLTVSGMLVWVSV
Trigger: GACTGAAACCCAGACGAGCATGCCAGAAACAGTCAACCATAACAAACATGGGAACGTAGCTCTGCCTGGAACGAAACCAACTCCCATCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255006.12
ENST00000484638.1
ENST00000648440.1
CDS TCA 72 bp ACTTCTCAGCGCAGATCTGACACACATCCTCAGTGGTaGTGTAAGGTCTCACAAGGAGGGTCTTTCCTGTGC +
Preference number: 6 (lower is better)
Translates to: TSQRRSDTHPQW*CKVSQGGSFLC
Trigger: GCACAGGAAAGACCCTCCTTGTGAGACCTTACATCACCACTGAGGATGTGTGTCAGATCTGCGCTGAGAAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255006.12
ENST00000440354.2
ENST00000484638.1
ENST00000648440.1
CDS CCA 72 bp ATTGTATGTGCTTTCCTTTATGGCAAATTCCTTGAGTaGGGCCCCAAATTCACAGGGCAGGCGGAGGGAGAG +
Preference number: 6 (lower is better)
Translates to: IVCAFLYGKFLE*GPKFTGQAEGE
Trigger: CTCTCCCTCCGCCTGCCCTGTGAATTTGGGGCCCCACTCAAGGAATTTGCCATAAAGGAAAGCACATACAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440354.2
CDS CCA 72 bp GGCAGCCCTCATAGGACTAAGGACACTGCAAACATTTaGGAGCTGCCAAGCCCTTTCAACAACACCACTGAA +
Preference number: 6 (lower is better)
Translates to: GSPHRTKDTANI*ELPSPFNNTTE
Trigger: TTCAGTGGTGTTGTTGAAAGGGCTTGGCAGCTCCCAAATGTTTGCAGTGTCCTTAGTCCTATGAGGGCTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648440.1
CDS CAA 72 bp AACATCCTGTATGTGCTTTCCTTTATGGCAAATTCCTaGAGTGGGGCCCCAAATTCACAGGGCAGGCGGAGG +
Preference number: 6 (lower is better)
Translates to: NILYVLSFMANS*SGAPNSQGRRR
Trigger: CCTCCGCCTGCCCTGTGAATTTGGGGCCCCACTCAAGGAATTTGCCATAAAGGAAAGCACATACAGGATGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484638.1
CDS TCA 72 bp TTCCAGGCAGAGCTACGTTCCCATGTTTGTTATGGTTaGCTGTTTCTGGCATGCTCGTCTGGGTTTCAGTCC +
Preference number: 6 (lower is better)
Translates to: FQAELRSHVCYG*LFLACSSGFQS
Trigger: GGACTGAAACCCAGACGAGCATGCCAGAAACAGTCAACCATAACAAACATGGGAACGTAGCTCTGCCTGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255006.12
ENST00000484638.1
ENST00000648440.1
CDS TCA 72 bp GTCTCACAAGGAGGGTCTTTCCTGTGCAACCACTGTTaGCCTCCTGAAATGCAACTCGGAGGTAATTCTGGA +
Preference number: 6 (lower is better)
Translates to: VSQGGSFLCNHC*PPEMQLGGNSG
Trigger: TCCAGAATTACCTCCGAGTTGCATTTCAGGAGGTCAACAGTGGTTGCACAGGAAAGACCCTCCTTGTGAGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255006.12
ENST00000440354.2
ENST00000484638.1
ENST00000648440.1
CDS TCA 72 bp GCCCCGTCTTGGCCTCCCAAAGTAAGATTACAGATGTaGGCCACCTACCTGGCGAGAGTATCATTTTTGTTG +
Preference number: 6 (lower is better)
Translates to: APSWPPKVRLQM*ATYLARVSFLL
Trigger: CAACAAAAATGATACTCTCGCCAGGTAGGTGGCTCACATCTGTAATCTTACTTTGGGAGGCCAAGACGGGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000616029.2
CDS GCA 72 bp GGTCTTTCCTGTGCAACCACTGTTGACCTCCTGAAATaGAACTCGGAGGTAATTCTGGAAGTCGTCCACAGA +
Preference number: 6 (lower is better)
Translates to: GLSCATTVDLLK*NSEVILEVVHR
Trigger: TCTGTGGACGACTTCCAGAATTACCTCCGAGTTGCATTTCAGGAGGTCAACAGTGGTTGCACAGGAAAGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255006.12
ENST00000440354.2
ENST00000484638.1
ENST00000648440.1
CDS GCA 72 bp ATGCTGAGAATGCAAAATGAGTCCATCCTCTTTAGCTaGTCCCCTGTAAGCCTTCTGGAGACTCACACGGCT +
Preference number: 6 (lower is better)
Translates to: MLRMQNESILFS*SPVSLLETHTA
Trigger: AGCCGTGTGAGTCTCCAGAAGGCTTACAGGGGAGCAGCTAAAGAGGATGGACTCATTTTGCATTCTCAGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467569.5
CDS CCA 72 bp GCCTATGATTCCTTAGAGAAGCCGCGATGCGTACATTaGTTCTACCTCCTTCAGAGTAGAGACCCCACAGAA +
Preference number: 6 (lower is better)
Translates to: AYDSLEKPRCVH*FYLLQSRDPTE
Trigger: TTCTGTGGGGTCTCTACTCTGAAGGAGGTAGAACCAATGTACGCATCGCGGCTTCTCTAAGGAATCATAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616029.2
CDS CAA 72 bp GTTCCAGGCAGAGCTACGTTCCCATGTTTGTTATGGTaGACTGTTTCTGGCATGCTCGTCTGGGTTTCAGTC +
Preference number: 6 (lower is better)
Translates to: VPGRATFPCLLW*TVSGMLVWVSV
Trigger: GACTGAAACCCAGACGAGCATGCCAGAAACAGTCAACCATAACAAACATGGGAACGTAGCTCTGCCTGGAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255006.12
ENST00000484638.1
ENST00000648440.1
CDS CAA 72 bp GTTGGTTTCGTTCCAGGCAGAGCTACGTTCCCATGTTaGTTATGGTTGACTGTTTCTGGCATGCTCGTCTGG +
Preference number: 6 (lower is better)
Translates to: VGFVPGRATFPC*LWLTVSGMLVW
Trigger: CCAGACGAGCATGCCAGAAACAGTCAACCATAACAAACATGGGAACGTAGCTCTGCCTGGAACGAAACCAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255006.12
ENST00000484638.1
ENST00000648440.1
CDS TCA 72 bp TTTCAGTGTCCAATTCAAGCATGTCACACTGGGCTATaGCATAGGTCAGGACTGGCAAGAAGTCATCAGCGC +
Preference number: 6 (lower is better)
Translates to: FQCPIQACHTGL*HRSGLARSHQR
Trigger: GCGCTGATGACTTCTTGCCAGTCCTGACCTATGTCATAGCCCAGTGTGACATGCTTGAATTGGACACTGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255006.12
ENST00000440354.2
ENST00000484638.1
ENST00000648440.1
CDS TCA 72 bp TTCTCCATGGTAATCAGCAATCAATCCTTGTCCAGGTaGTCCAAGTCAGCATCCCAAACGAAGGCAGCCAGA +
Preference number: 6 (lower is better)
Translates to: FSMVISNQSLSR*SKSASQTKAAR
Trigger: TCTGGCTGCCTTCGTTTGGGATGCTGACTTGGATCACCTGGACAAGGATTGATTGCTGATTACCATGGAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616029.2
CDS GCA 72 bp AGAGTTCCTGCCTATGATTCCTTAGAGAAGCCGCGATaGGTACATTGGTTCTACCTCCTTCAGAGTAGAGAC +
Preference number: 6 (lower is better)
Translates to: RVPAYDSLEKPR*VHWFYLLQSRD
Trigger: GTCTCTACTCTGAAGGAGGTAGAACCAATGTACGCATCGCGGCTTCTCTAAGGAATCATAGGCAGGAACTCT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616029.2
CDS CCA 72 bp TTCGTTCCAGGCAGAGCTACGTTCCCATGTTTGTTATaGTTGACTGTTTCTGGCATGCTCGTCTGGGTTTCA +
Preference number: 6 (lower is better)
Translates to: FVPGRATFPCLL*LTVSGMLVWVS
Trigger: TGAAACCCAGACGAGCATGCCAGAAACAGTCAACCATAACAAACATGGGAACGTAGCTCTGCCTGGAACGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255006.12
ENST00000484638.1
ENST00000648440.1
CDS CAA 72 bp CTCCGTAGTTTGAGAGGCTGTGAAATTCCTCCAGACTaGTACCGGTTGGAAGCTTGTTCTTTTCCTGGCTTC +
Preference number: 6 (lower is better)
Translates to: LRSLRGCEIPPD*YRLEACSFPGF
Trigger: GAAGCCAGGAAAAGAACAAGCTTCCAACCGGTACAAGTCTGGAGGAATTTCACAGCCTCTCAAACTACGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648440.1
CDS CAA 90 bp CCTGTAAGCCTTCTGGAGACTCACACGGCTACACTGAATTCTACTTaGCACACGCTGGATCTTGCTGCATTACTGTTTCCATCATTGGGA +
Preference number: 6 (lower is better)
Translates to: PVSLLETHTATLNST*HTLDLAALLFPSLG
Trigger: TCCCAATGATGGAAACAGTAATGCAGCAAGATCCAGCGTGTGCAAAGTAGAATTCAGTGTAGCCGTGTGAGTCTCCAGAAGGCTTACAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467569.5
CDS TCA 72 bp GGAAATATAGTCCCTGTTAGGCAGAGTTCCTGCCTATaGTTCCTTAGAGAAGCCGCGATGCGTACATTGGTT +
Preference number: 6 (lower is better)
Translates to: GNIVPVRQSSCL*FLREAAMRTLV
Trigger: AACCAATGTACGCATCGCGGCTTCTCTAAGGAATCATAGGCAGGAACTCTGCCTAACAGGGACTATATTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616029.2
CDS GCA 72 bp GGCTACACTGAATTCTACTTTGCACACGCTGGATCTTaGTGCATTACTGTTTCCATCATTGGGAGTAGGTGG +
Preference number: 6 (lower is better)
Translates to: GYTEFYFAHAGS*CITVSIIGSRW
Trigger: CCACCTACTCCCAATGATGGAAACAGTAATGCAGCAAGATCCAGCGTGTGCAAAGTAGAATTCAGTGTAGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000467569.5
ENST00000488077.1
CDS GCA 72 bp GTCCTCTTAGGATCCCCATGTGCCTTGGTCCAGATCTaGTCCCATCAGACCACAATGAAAGCTTTTAAGATA +
Preference number: 6 (lower is better)
Translates to: VLLGSPCALVQI*SHQTTMKAFKI
Trigger: TATCTTAAAAGCTTTCATTGTGGTCTGATGGGAGCAGATCTGGACCAAGGCACATGGGGATCCTAAGAGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000616029.2
ENST00000648165.1
CDS CAA 72 bp CTTCTGGAGACTCACACGGCTACACTGAATTCTACTTaGCACACGCTGGATCTTGCTGCATTACTGTTTCCA +
Preference number: 6 (lower is better)
Translates to: LLETHTATLNST*HTLDLAALLFP
Trigger: TGGAAACAGTAATGCAGCAAGATCCAGCGTGTGCAAAGTAGAATTCAGTGTAGCCGTGTGAGTCTCCAGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467569.5
CDS CAA 72 bp CCAAATGAATTAGTCCTCTTAGGATCCCCATGTGCCTaGGTCCAGATCTGCTCCCATCAGACCACAATGAAA +
Preference number: 6 (lower is better)
Translates to: PNELVLLGSPCA*VQICSHQTTMK
Trigger: TTTCATTGTGGTCTGATGGGAGCAGATCTGGACCAAGGCACATGGGGATCCTAAGAGGACTAATTCATTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000616029.2
ENST00000648165.1
CDS CAA 90 bp TCTACTTTGCACACGCTGGATCTTGCTGCATTACTGTTTCCATCATaGGGAGTAGGTGGATATGGCACAGACAATTTTAGGTTTCCGGGT +
Preference number: 6 (lower is better)
Translates to: STLHTLDLAALLFPS*GVGGYGTDNFRFPG
Trigger: ACCCGGAAACCTAAAATTGTCTGTGCCATATCCACCTACTCCCAATGATGGAAACAGTAATGCAGCAAGATCCAGCGTGTGCAAAGTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000467569.5
ENST00000488077.1
CDS CAA 90 bp GAAGTGTCACCAAATGAATTAGTCCTCTTAGGATCCCCATGTGCCTaGGTCCAGATCTGCTCCCATCAGACCACAATGAAAGCTTTTAAG +
Preference number: 6 (lower is better)
Translates to: EVSPNELVLLGSPCA*VQICSHQTTMKAFK
Trigger: CTTAAAAGCTTTCATTGTGGTCTGATGGGAGCAGATCTGGACCAAGGCACATGGGGATCCTAAGAGGACTAATTCATTTGGTGACACTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000616029.2
ENST00000648165.1
CDS TCA 72 bp GTGCCTTGGTCCAGATCTGCTCCCATCAGACCACAATaGAAGCTTTTAAGATATCCCTCCTGTCTTTCTCTT +
Preference number: 6 (lower is better)
Translates to: VPWSRSAPIRPQ*KLLRYPSCLSL
Trigger: AAGAGAAAGACAGGAGGGATATCTTAAAAGCTTTCATTGTGGTCTGATGGGAGCAGATCTGGACCAAGGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000616029.2
ENST00000648165.1
CDS TCA 72 bp GTACCGGTTGGAAGCTTGTTCTTTTCCTGGCTTCCCTaGAGGGTAAAGTGGATTCTTGAGAAAATGAGTCCA +
Preference number: 6 (lower is better)
Translates to: VPVGSLFFSWLP*RVKWILEKMSP
Trigger: TGGACTCATTTTCTCAAGAATCCACTTTACCCTTCAGGGAAGCCAGGAAAAGAACAAGCTTCCAACCGGTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648440.1
CDS GCA 72 bp CTATCTTTGTTGAGTATTTTGACACGTGGCAATGCATaGCCTAACTCCCAGCCAAACCTAGAACAAGCCAAC +
Preference number: 6 (lower is better)
Translates to: LSLLSILTRGNA*PNSQPNLEQAN
Trigger: GTTGGCTTGTTCTAGGTTTGGCTGGGAGTTAGGGCATGCATTGCCACGTGTCAAAATACTCAACAAAGATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616029.2
CDS CAA 72 bp CACACGCTGGATCTTGCTGCATTACTGTTTCCATCATaGGGAGTAGGTGGATATGGCACAGACAATTTTAGG +
Preference number: 6 (lower is better)
Translates to: HTLDLAALLFPS*GVGGYGTDNFR
Trigger: CCTAAAATTGTCTGTGCCATATCCACCTACTCCCAATGATGGAAACAGTAATGCAGCAAGATCCAGCGTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000467569.5
ENST00000488077.1
CDS TCA 72 bp CTTTTCCTGGCTTCCCTGAAGGGTAAAGTGGATTCTTaGGAAAATGAGTCCAACATGTCCAGTAGATGTTTC +
Preference number: 6 (lower is better)
Translates to: LFLASLKGKVDS*ENESNMSSRCF
Trigger: GAAACATCTACTGGACATGTTGGACTCATTTTCTCAAGAATCCACTTTACCCTTCAGGGAAGCCAGGAAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648440.1
CDS GCA 72 bp AGCAGCATGACCTTCTTTTCCGGCGAATACATCTTCTaGATGGTCATGAACTTGACTTTGATTTTCTCCACA +
Preference number: 6 (lower is better)
Translates to: SSMTFFSGEYIF*MVMNLTLIFST
Trigger: TGTGGAGAAAATCAAAGTCAAGTTCATGACCATGCAGAAGATGTATTCGCCGGAAAAGAAGGTCATGCTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000255006.12
ENST00000440354.2
ENST00000484638.1
ENST00000648440.1
CDS GCA 72 bp TACACTGAATTCTACTTTGCACACGCTGGATCTTGCTaGATTACTGTTTCCATCATTGGGAGTAGGTGGATA +
Preference number: 6 (lower is better)
Translates to: YTEFYFAHAGSC*ITVSIIGSRWI
Trigger: TATCCACCTACTCCCAATGATGGAAACAGTAATGCAGCAAGATCCAGCGTGTGCAAAGTAGAATTCAGTGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000467569.5
ENST00000488077.1
CDS CAA 72 bp GGAAATTCTTTATCAGAGAAAGTGCTCCATATGCGCTaGTCAAGTAATAGCCTCCTTCTCCATGTAACAGCG +
Preference number: 6 (lower is better)
Translates to: GNSLSEKVLHMR*SSNSLLLHVTA
Trigger: CGCTGTTACATGGAGAAGGAGGCTATTACTTGACAAGCGCATATGGAGCACTTTCTCTGATAAAGAATTTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255006.12
ENST00000440354.2
ENST00000484638.1
ENST00000648440.1