RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RIMS2 (Homo sapiens)

Ensembl gene IDs: ENSG00000176406

Ensembl transcript IDs: ENST00000262231.14, ENST00000339750.3, ENST00000395361.3, ENST00000408894.6, ENST00000436393.6, ENST00000501515.6, ENST00000504942.6, ENST00000507677.5, ENST00000507740.5, ENST00000511046.1, ENST00000512598.5, ENST00000515551.5, ENST00000523362.5, ENST00000632716.1, ENST00000666250.1, ENST00000668113.1

Found 943 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CCTGCCCTTGGACATCCAACACTAGGTTCTTTGGCCTTTGGACTCTaGAACTTGCACCAGTGGCTTGCTGGTGGCTCTCAGGCCTTTGAC +
Preference number: 1 (lower is better)
Translates to: PALGHPTLGSLAFGL*NLHQWLAGGSQAFD
Trigger: GTCAAAGGCCTGAGAGCCACCAGCAAGCCACTGGTGCAAGTTCCAGAGTCCAAAGGCCAAAGAACCTAGTGTTGGATGTCCAAGGGCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507677.5
3UTR CCA 90 bp CACTCTTCCTGCCCTTGGACATCCAACACTAGGTTCTTTGGCCTTTaGACTCTGGAACTTGCACCAGTGGCTTGCTGGTGGCTCTCAGGC +
Preference number: 1 (lower is better)
Translates to: HSSCPWTSNTRFFGL*TLELAPVACWWLSG
Trigger: GCCTGAGAGCCACCAGCAAGCCACTGGTGCAAGTTCCAGAGTCCAAAGGCCAAAGAACCTAGTGTTGGATGTCCAAGGGCAGGAAGAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507677.5
3UTR TCA 90 bp CTGACTGCTCTGATTCCCGCCCAGAGGAGGGCTGATGATTGTTCCTaGCCACTTCTTTGGTCTCCTGCTTTTCACCTGATGCTTCCTAGG +
Preference number: 1 (lower is better)
Translates to: LTALIPAQRRADDCS*PLLWSPAFHLMLPR
Trigger: CCTAGGAAGCATCAGGTGAAAAGCAGGAGACCAAAGAAGTGGTCAGGAACAATCATCAGCCCTCCTCTGGGCGGGAATCAGAGCAGTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
3UTR CCA 90 bp AGGAAGACTCACCCAATCCACCATCCAGTCGGCTGCCAATGCAGCTaGAACAAAGCGGGTGAAGAAGGTGGGATAACCTTGCTTGCTAAG +
Preference number: 1 (lower is better)
Translates to: RKTHPIHHPVGCQCS*NKAGEEGGITLLAK
Trigger: CTTAGCAAGCAAGGTTATCCCACCTTCTTCACCCGCTTTGTTCCAGCTGCATTGGCAGCCGACTGGATGGTGGATTGGGTGAGTCTTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507677.5
3UTR TCA 90 bp GAAGCAGACTCCCATGAGAACTCTGCAGGGTTTCCTTCTCCCAGTTaGGGAATCGCCCCAGAAGGATATGGAGAAATCCTCTCACCCATT +
Preference number: 1 (lower is better)
Translates to: EADSHENSAGFPSPS*GIAPEGYGEILSPI
Trigger: AATGGGTGAGAGGATTTCTCCATATCCTTCTGGGGCGATTCCTCAACTGGGAGAAGGAAACCCTGCAGAGTTCTCATGGGAGTCTGCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507740.5
3UTR GCA 90 bp CATTTCACAGTCCAGAGGTGGATGTGTGAACTCCTGTTTCTTCAGTaGATAAATGCCCACAGAACCCTGAGGGCATCACGAGCTGAGGGA +
Preference number: 1 (lower is better)
Translates to: HFTVQRWMCELLFLQ*INAHRTLRASRAEG
Trigger: TCCCTCAGCTCGTGATGCCCTCAGGGTTCTGTGGGCATTTATGCACTGAAGAAACAGGAGTTCACACATCCACCTCTGGACTGTGAAATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507740.5
3UTR CCA 90 bp CATATCCTTTATTGTTGCCTATGGAGCCTTGGCATCTGGGGTCCCTaGGAAAGTGAAGGTGTTGGCATCAATGGCAGCCATGTTGTTAGG +
Preference number: 1 (lower is better)
Translates to: HILYCCLWSLGIWGP*ESEGVGINGSHVVR
Trigger: CCTAACAACATGGCTGCCATTGATGCCAACACCTTCACTTTCCCAGGGACCCCAGATGCCAAGGCTCCATAGGCAACAATAAAGGATATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507740.5
3UTR CCA 90 bp CTATCATACCCACTACAGGACCATCATATCCTTTATTGTTGCCTATaGAGCCTTGGCATCTGGGGTCCCTGGGAAAGTGAAGGTGTTGGC +
Preference number: 1 (lower is better)
Translates to: LSYPLQDHHILYCCL*SLGIWGPWESEGVG
Trigger: GCCAACACCTTCACTTTCCCAGGGACCCCAGATGCCAAGGCTCCATAGGCAACAATAAAGGATATGATGGTCCTGTAGTGGGTATGATAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507740.5
3UTR CCA 90 bp TGCAGGGTTTCCTTCTCCCAGTTGAGGAATCGCCCCAGAAGGATATaGAGAAATCCTCTCACCCATTCATATCCACACGTAGAAGCTAGT +
Preference number: 1 (lower is better)
Translates to: CRVSFSQLRNRPRRI*RNPLTHSYPHVEAS
Trigger: ACTAGCTTCTACGTGTGGATATGAATGGGTGAGAGGATTTCTCCATATCCTTCTGGGGCGATTCCTCAACTGGGAGAAGGAAACCCTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507740.5
3UTR TCA 90 bp CTGATGATTGTTCCTGACCACTTCTTTGGTCTCCTGCTTTTCACCTaGTGCTTCCTAGGATTACACTCCTCACCTGTAACACCGCTTCAT +
Preference number: 1 (lower is better)
Translates to: LMIVPDHFFGLLLFT*CFLGLHSSPVTPLH
Trigger: ATGAAGCGGTGTTACAGGTGAGGAGTGTAATCCTAGGAAGCATCAGGTGAAAAGCAGGAGACCAAAGAAGTGGTCAGGAACAATCATCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
3UTR GCA 90 bp CTAATTCTATCATACCCACTACAGGACCATCATATCCTTTATTGTTaGCTATGGAGCCTTGGCATCTGGGGTCCCTGGGAAAGTGAAGGT +
Preference number: 1 (lower is better)
Translates to: LILSYPLQDHHILYC*LWSLGIWGPWESEG
Trigger: ACCTTCACTTTCCCAGGGACCCCAGATGCCAAGGCTCCATAGGCAACAATAAAGGATATGATGGTCCTGTAGTGGGTATGATAGAATTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507740.5
3UTR TCA 90 bp AGGGCATCACGAGCTGAGGGAGTTGAGACAAACACATTGAGCACATaGTTTTTACGTGCACAGAATGTCAAGGTTTACATCAGTAGTAGG +
Preference number: 1 (lower is better)
Translates to: RASRAEGVETNTLST*FLRAQNVKVYISSR
Trigger: CCTACTACTGATGTAAACCTTGACATTCTGTGCACGTAAAAATCATGTGCTCAATGTGTTTGTCTCAACTCCCTCAGCTCGTGATGCCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000507740.5
3UTR CCA 90 bp CCCTTTACTTTTCAAACATACTATGTACAGGGCAACAACGGTCACTaGCATAGTGCTAGTTACATGACTAAACCACAAGTCGAGGTGCAG +
Preference number: 1 (lower is better)
Translates to: PFTFQTYYVQGNNGH*HSASYMTKPQVEVQ
Trigger: CTGCACCTCGACTTGTGGTTTAGTCATGTAACTAGCACTATGCCAGTGACCGTTGTTGCCCTGTACATAGTATGTTTGAAAAGTAAAGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
3UTR TCA 90 bp CAGAATTTTGTTTTTCAGAGTCCAACACATCTTAGCATTAGTAATTaGCGTGCCCATGGAGCTACAAAGTCTGCCACTCTTCCTGCTGGA +
Preference number: 1 (lower is better)
Translates to: QNFVFQSPTHLSISN*RAHGATKSATLPAG
Trigger: TCCAGCAGGAAGAGTGGCAGACTTTGTAGCTCCATGGGCACGTCAATTACTAATGCTAAGATGTGTTGGACTCTGAAAAACAAAATTCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
3UTR GCA 90 bp TTCTTTAGGGCACAATGTGTGCAACTTCCTCTGAGAACACAGGATTaGTTTGTATCCCTAGAAACAGGCTCAGAAGACACAACATTAAGC +
Preference number: 1 (lower is better)
Translates to: FFRAQCVQLPLRTQD*FVSLETGSEDTTLS
Trigger: GCTTAATGTTGTGTCTTCTGAGCCTGTTTCTAGGGATACAAAGCAATCCTGTGTTCTCAGAGGAAGTTGCACACATTGTGCCCTAAAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
3UTR TCA 90 bp GAGATTAATCCATGGCTTCAGATTGGACCAGAACTCGAGTGTCATTaGATTCCAAATCTGATAGTTCTTCACAGCTCTGCTCTTTCACCT +
Preference number: 1 (lower is better)
Translates to: EINPWLQIGPELECH*IPNLIVLHSSALSP
Trigger: AGGTGAAAGAGCAGAGCTGTGAAGAACTATCAGATTTGGAATTCAATGACACTCGAGTTCTGGTCCAATCTGAAGCCATGGATTAATCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
3UTR CCA 90 bp CTCTCTTGCAAAGTATTTCTCAATACACATTTCACAGTCCAGAGGTaGATGTGTGAACTCCTGTTTCTTCAGTGCATAAATGCCCACAGA +
Preference number: 1 (lower is better)
Translates to: LSCKVFLNTHFTVQR*MCELLFLQCINAHR
Trigger: TCTGTGGGCATTTATGCACTGAAGAAACAGGAGTTCACACATCCACCTCTGGACTGTGAAATGTGTATTGAGAAATACTTTGCAAGAGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507740.5
3UTR CCA 90 bp AATCTACCTCAAACTCCATATTTTCCAGGTGAGGAAATGAAATCCTaGAGATTAAGTGACCTGAGTCAGGGCATATGGAAGATGTGTGTG +
Preference number: 1 (lower is better)
Translates to: NLPQTPYFPGEEMKS*RLSDLSQGIWKMCV
Trigger: CACACACATCTTCCATATGCCCTGACTCAGGTCACTTAATCTCCAGGATTTCATTTCCTCACCTGGAAAATATGGAGTTTGAGGTAGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507740.5
3UTR GCA 90 bp GTCAAGGTTTACATCAGTAGTAGGCAGACAGCTTTGGTGATCTCTTaGCTAATTCTATCATACCCACTACAGGACCATCATATCCTTTAT +
Preference number: 1 (lower is better)
Translates to: VKVYISSRQTALVIS*LILSYPLQDHHILY
Trigger: ATAAAGGATATGATGGTCCTGTAGTGGGTATGATAGAATTAGGCAAGAGATCACCAAAGCTGTCTGCCTACTACTGATGTAAACCTTGAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507740.5
3UTR CCA 90 bp AAATATATGGGACAGATAGGGGGAATTGGACTCGAGTTGAGTCTTTaGAAATGGAGGAAATGGTTGTTTCCAAGAATAGAGAGACAGCTA +
Preference number: 1 (lower is better)
Translates to: KYMGQIGGIGLELSL*KWRKWLFPRIERQL
Trigger: TAGCTGTCTCTCTATTCTTGGAAACAACCATTTCCTCCATTTCCAAAGACTCAACTCGAGTCCAATTCCCCCTATCTGTCCCATATATTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000507740.5
3UTR CCA 90 bp TATATATGGGATAAAGGAAAAATATATGGGACAGATAGGGGGAATTaGACTCGAGTTGAGTCTTTGGAAATGGAGGAAATGGTTGTTTCC +
Preference number: 1 (lower is better)
Translates to: YIWDKGKIYGTDRGN*TRVESLEMEEMVVS
Trigger: GGAAACAACCATTTCCTCCATTTCCAAAGACTCAACTCGAGTCCAATTCCCCCTATCTGTCCCATATATTTTTCCTTTATCCCATATATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000507740.5
3UTR CAA 90 bp GCCTATGGAGCCTTGGCATCTGGGGTCCCTGGGAAAGTGAAGGTGTaGGCATCAATGGCAGCCATGTTGTTAGGGTTTAGTCAGGAGTTG +
Preference number: 2 (lower is better)
Translates to: AYGALASGVPGKVKV*ASMAAMLLGFSQEL
Trigger: CAACTCCTGACTAAACCCTAACAACATGGCTGCCATTGATGCCAACACCTTCACTTTCCCAGGGACCCCAGATGCCAAGGCTCCATAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507740.5
3UTR-3UTR TCA 90 bp CCAACACTAGGTTCTTTGGCCTTTGGACTCTGGAACTTGCACCAGTGGCTTGCTCCCTCTGGAGAACACTaGCTAATACAGCCACCCTAC +
Preference number: 2 (lower is better)
Translates to: PTLGSLAFGLWNLHQWLAPSGEH*LIQPPY
Trigger: GTAGGGTGGCTGTATTAGTCAGTGTTCTCCAGAGGG...AGCAAGCCACTGGTGCAAGTTCCAGAGTCCAAAGGCCAAAGAACCTAGTGTTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507677.5
3UTR CAA 90 bp GTGTTGGCATCAATGGCAGCCATGTTGTTAGGGTTTAGTCAGGAGTaGCCGAAAGAGCTCATTCGTGAGCTGGGAGTTGCAAGAAGGGAC +
Preference number: 2 (lower is better)
Translates to: VLASMAAMLLGFSQE*PKELIRELGVARRD
Trigger: GTCCCTTCTTGCAACTCCCAGCTCACGAATGAGCTCTTTCGGCAACTCCTGACTAAACCCTAACAACATGGCTGCCATTGATGCCAACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507740.5
3UTR-3UTR TCA 90 bp GAACTCTGCAGGGTTTCCTTCTCCCAGTTGAGGAATCGCCCCAGAAGGATATGGGTGTGCAACTTCCTCTaGGAACACAGGATTGCTTTG +
Preference number: 2 (lower is better)
Translates to: ELCRVSFSQLRNRPRRIWVCNFL*EHRIAL
Trigger: CAAAGCAATCCTGTGTTCTCAGAGGAAGTTGCACAC...CCATATCCTTCTGGGGCGATTCCTCAACTGGGAGAAGGAAACCCTGCAGAGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507740.5
3UTR-3UTR TCA 90 bp GAACTCTGCAGGGTTTCCTTCTCCCAGTTGAGGAATCGCCCCAGAAGGATATGGGCTGATGATTGTTCCTaGCCACTTCTTTGGTCTCCT +
Preference number: 2 (lower is better)
Translates to: ELCRVSFSQLRNRPRRIWADDCS*PLLWSP
Trigger: AGGAGACCAAAGAAGTGGTCAGGAACAATCATCAGC...CCATATCCTTCTGGGGCGATTCCTCAACTGGGAGAAGGAAACCCTGCAGAGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507740.5
3UTR-3UTR GCA 90 bp CACAGAACCCTGAGGGCATCACGAGCTGAGGGAGTTGAGACAAACACATTGAGCGGTTTAGTCAGGAGTTaGCGAAAGAGCTCATTCGTG +
Preference number: 2 (lower is better)
Translates to: HRTLRASRAEGVETNTLSGLVRS*RKSSFV
Trigger: CACGAATGAGCTCTTTCGGCAACTCCTGACTAAACC...GCTCAATGTGTTTGTCTCAACTCCCTCAGCTCGTGATGCCCTCAGGGTTCTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507740.5
3UTR-3UTR GCA 90 bp CCAACACTAGGTTCTTTGGCCTTTGGACTCTGGAACTTGCACCAGTGGCTTGCTCTCCCTTCCCCAGCTTaGAGAAATTCTATGGTGGGA +
Preference number: 2 (lower is better)
Translates to: PTLGSLAFGLWNLHQWLALPSPA*RNSMVG
Trigger: TCCCACCATAGAATTTCTGCAAGCTGGGGAAGGGAG...AGCAAGCCACTGGTGCAAGTTCCAGAGTCCAAAGGCCAAAGAACCTAGTGTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507677.5
3UTR-3UTR CCA 90 bp GAACTCTGCAGGGTTTCCTTCTCCCAGTTGAGGAATCGCCCCAGAAGGATATGGTCCATGGCTTCAGATTaGACCAGAACTCGAGTGTCA +
Preference number: 2 (lower is better)
Translates to: ELCRVSFSQLRNRPRRIWSMASD*TRTRVS
Trigger: TGACACTCGAGTTCTGGTCCAATCTGAAGCCATGGA...CCATATCCTTCTGGGGCGATTCCTCAACTGGGAGAAGGAAACCCTGCAGAGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507740.5
3UTR-3UTR CCA 90 bp TGGAACAAAGCGGGTGAAGAAGGTGGGATAACCTTGCTTGCTAAGTTTTCTGGCGGACTAAGCCACTACTaGCTTCTCCCTTCCCCAGCT +
Preference number: 2 (lower is better)
Translates to: WNKAGEEGGITLLAKFSGGLSHY*LLPSPA
Trigger: AGCTGGGGAAGGGAGAAGCCAGTAGTGGCTTAGTCC...GCCAGAAAACTTAGCAAGCAAGGTTATCCCACCTTCTTCACCCGCTTTGTTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507677.5
3UTR CAA 90 bp ACCCACTACAGGACCATCATATCCTTTATTGTTGCCTATGGAGCCTaGGCATCTGGGGTCCCTGGGAAAGTGAAGGTGTTGGCATCAATG +
Preference number: 2 (lower is better)
Translates to: THYRTIISFIVAYGA*ASGVPGKVKVLASM
Trigger: CATTGATGCCAACACCTTCACTTTCCCAGGGACCCCAGATGCCAAGGCTCCATAGGCAACAATAAAGGATATGATGGTCCTGTAGTGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507740.5
3UTR-3UTR GCA 90 bp CCTCTCACCCATTCATATCCACACGTAGAAGCTAGTCTCCGGACAGGTTGTTACGGCGTTTTAAAGAAATaGTCTACTGAGGGCCGCTGC +
Preference number: 2 (lower is better)
Translates to: PLTHSYPHVEASLRTGCYGVLKK*STEGRC
Trigger: GCAGCGGCCCTCAGTAGAGCATTTCTTTAAAACGCC...GTAACAACCTGTCCGGAGACTAGCTTCTACGTGTGGATATGAATGGGTGAGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507740.5
3UTR-3UTR TCA 90 bp GAACTCTGCAGGGTTTCCTTCTCCCAGTTGAGGAATCGCCCCAGAAGGATATGGCCCACAAAGCAAAACTaGCACTTTAGCAGAAACACA +
Preference number: 2 (lower is better)
Translates to: ELCRVSFSQLRNRPRRIWPTKQN*HFSRNT
Trigger: TGTGTTTCTGCTAAAGTGTCAGTTTTGCTTTGTGGG...CCATATCCTTCTGGGGCGATTCCTCAACTGGGAGAAGGAAACCCTGCAGAGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507740.5
3UTR-3UTR GCA 90 bp CTTTTCAAACATACTATGTACAGGGCAACAACGGTCACTGGCATAGTGCTAGTTTCCTGCTGGACTGACTaGTCTGATTCCCGCCCAGAG +
Preference number: 2 (lower is better)
Translates to: LFKHTMYRATTVTGIVLVSCWTD*SDSRPE
Trigger: CTCTGGGCGGGAATCAGAGCAGTCAGTCCAGCAGGA...AACTAGCACTATGCCAGTGACCGTTGTTGCCCTGTACATAGTATGTTTGAAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
3UTR-3UTR CCA 90 bp ATATGGAGAAATCCTCTCACCCATTCATATCCACACGTAGAAGCTAGTCTCCGGTGCCACTCTTCCTGCTaGACTGACTGCTCTGATTCC +
Preference number: 2 (lower is better)
Translates to: IWRNPLTHSYPHVEASLRCHSSC*TDCSDS
Trigger: GGAATCAGAGCAGTCAGTCCAGCAGGAAGAGTGGCA...CCGGAGACTAGCTTCTACGTGTGGATATGAATGGGTGAGAGGATTTCTCCATAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507740.5
3UTR-3UTR CCA 90 bp TGCTGGATGATTCCTTTCACTCTTCCTGCCCTTGGACATCCAACACTAGGTTCTTTGGCCTTTGGACTCTaGAACTTGCACCAGTGGCTT +
Preference number: 2 (lower is better)
Translates to: CWMIPFTLPALGHPTLGSLAFGL*NLHQWL
Trigger: AAGCCACTGGTGCAAGTTCCAGAGTCCAAAGGCCAA...AGAACCTAGTGTTGGATGTCCAAGGGCAGGAAGAGTGAAAGGAATCATCCAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507677.5
3UTR-3UTR CCA 90 bp TGGAACAAAGCGGGTGAAGAAGGTGGGATAACCTTGCTTGCTAAGTTTTCTGGCCACTCTTCCTGCCCTTaGACATCCAACACTAGGTTC +
Preference number: 2 (lower is better)
Translates to: WNKAGEEGGITLLAKFSGHSSCP*TSNTRF
Trigger: GAACCTAGTGTTGGATGTCCAAGGGCAGGAAGAGTG...GCCAGAAAACTTAGCAAGCAAGGTTATCCCACCTTCTTCACCCGCTTTGTTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507677.5
3UTR-3UTR TCA 90 bp CTGAAGCAGACTCCCATGAGAACTCTGCAGGGTTTCCTTCTCCCAGTTGAGGAAATAGTGCTAGTTACATaGCTAAACCACAAGTCGAGG +
Preference number: 2 (lower is better)
Translates to: LKQTPMRTLQGFLLPVEEIVLVT*LNHKSR
Trigger: CCTCGACTTGTGGTTTAGTCATGTAACTAGCACTAT...TTCCTCAACTGGGAGAAGGAAACCCTGCAGAGTTCTCATGGGAGTCTGCTTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507740.5
3UTR-3UTR TCA 90 bp CACAGAACCCTGAGGGCATCACGAGCTGAGGGAGTTGAGACAAACACATTGAGCTCGTCAAATACATGCTaGCTTACTTTAATGTACTCC +
Preference number: 2 (lower is better)
Translates to: HRTLRASRAEGVETNTLSSSNTC*LTLMYS
Trigger: GGAGTACATTAAAGTAAGTCAGCATGTATTTGACGA...GCTCAATGTGTTTGTCTCAACTCCCTCAGCTCGTGATGCCCTCAGGGTTCTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507740.5
3UTR-3UTR TCA 90 bp GCTGGTAAAGTATTGTTTCTAGATGTGTCTGTAAGGTGTTGCCAGAGGAGACTGCTGGAACAAAGCGGGTaGAGAAGGTGGGATAACCTT +
Preference number: 2 (lower is better)
Translates to: AGKVLFLDVSVRCCQRRLLEQSG*RRWDNL
Trigger: AAGGTTATCCCACCTTCTTCACCCGCTTTGTTCCAG...CAGTCTCCTCTGGCAACACCTTACAGACACATCTAGAAACAATACTTTACCAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507677.5
3UTR-3UTR CCA 90 bp CTTTTCAAACATACTATGTACAGGGCAACAACGGTCACTGGCATAGTGCTAGTTTGCCACTCTTCCTGCTaGACTGACTGCTCTGATTCC +
Preference number: 2 (lower is better)
Translates to: LFKHTMYRATTVTGIVLVCHSSC*TDCSDS
Trigger: GGAATCAGAGCAGTCAGTCCAGCAGGAAGAGTGGCA...AACTAGCACTATGCCAGTGACCGTTGTTGCCCTGTACATAGTATGTTTGAAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
3UTR-3UTR CCA 90 bp CACAGAACCCTGAGGGCATCACGAGCTGAGGGAGTTGAGACAAACACATTGAGCTTTAACAACTTTACCTaGGTCCATCAGAATGTCAAG +
Preference number: 2 (lower is better)
Translates to: HRTLRASRAEGVETNTLSFNNFT*VHQNVK
Trigger: CTTGACATTCTGATGGACCCAGGTAAAGTTGTTAAA...GCTCAATGTGTTTGTCTCAACTCCCTCAGCTCGTGATGCCCTCAGGGTTCTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507740.5
3UTR-3UTR TCA 90 bp CCTCTCACCCATTCATATCCACACGTAGAAGCTAGTCTCCGGACAGGTTGTTACATCAAACATGGGGTATaGGAGAGGATCAGATCAAAA +
Preference number: 2 (lower is better)
Translates to: PLTHSYPHVEASLRTGCYIKHGV*ERIRSK
Trigger: TTTTGATCTGATCCTCTCTCATACCCCATGTTTGAT...GTAACAACCTGTCCGGAGACTAGCTTCTACGTGTGGATATGAATGGGTGAGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507740.5
3UTR-3UTR GCA 90 bp GTTCTTTTAACAACTTTACCTGGGTCCATCAGAATGTCAAGACACAGTCTTGGTGTCTGCCACTCTTCCTaGTGGACTGACTGCTCTGAT +
Preference number: 2 (lower is better)
Translates to: VLLTTLPGSIRMSRHSLGVCHSS*WTDCSD
Trigger: ATCAGAGCAGTCAGTCCAGCAGGAAGAGTGGCAGAC...ACCAAGACTGTGTCTTGACATTCTGATGGACCCAGGTAAAGTTGTTAAAAGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
3UTR-3UTR GCA 90 bp CTTTTCAAACATACTATGTACAGGGCAACAACGGTCACTGGCATAGTGCTAGTTTGGAGCTACAAAGTCTaGCACTCTTCCTGCTGGACT +
Preference number: 2 (lower is better)
Translates to: LFKHTMYRATTVTGIVLVWSYKV*HSSCWT
Trigger: AGTCCAGCAGGAAGAGTGGCAGACTTTGTAGCTCCA...AACTAGCACTATGCCAGTGACCGTTGTTGCCCTGTACATAGTATGTTTGAAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
3UTR-3UTR GCA 90 bp CTAAGACCAGCAGTCCACTTATGTTATCGAGAAGTAGGAGACGGTGATTTCATTTGGAGCTACAAAGTCTaGCACTCTTCCTGCTGGACT +
Preference number: 2 (lower is better)
Translates to: LRPAVHLCYREVGDGDFIWSYKV*HSSCWT
Trigger: AGTCCAGCAGGAAGAGTGGCAGACTTTGTAGCTCCA...AATGAAATCACCGTCTCCTACTTCTCGATAACATAAGTGGACTGCTGGTCTTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507740.5
3UTR-3UTR GCA 90 bp AAGTTTTCTGGCTTCTTTCTTTTTCCTGTGCTGGATGATTCCTTTCACTCTTCCTTGGACTCTGGAACTTaGACCAGTGGCTTGCTGGTG +
Preference number: 2 (lower is better)
Translates to: KFSGFFLFPVLDDSFHSSLDSGT*TSGLLV
Trigger: CACCAGCAAGCCACTGGTGCAAGTTCCAGAGTCCAA...GGAAGAGTGAAAGGAATCATCCAGCACAGGAAAAAGAAAGAAGCCAGAAAACTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000507677.5
3UTR-3UTR CCA 90 bp GTTCTTTTAACAACTTTACCTGGGTCCATCAGAATGTCAAGACACAGTCTTGGTTGCCACTCTTCCTGCTaGACTGACTGCTCTGATTCC +
Preference number: 2 (lower is better)
Translates to: VLLTTLPGSIRMSRHSLGCHSSC*TDCSDS
Trigger: GGAATCAGAGCAGTCAGTCCAGCAGGAAGAGTGGCA...ACCAAGACTGTGTCTTGACATTCTGATGGACCCAGGTAAAGTTGTTAAAAGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
3UTR CAA 90 bp GGTGCCATTGAAAAGGGCTTCTGTTGCATGAAACTGACTGATTCTTaGAGATTAATCCATGGCTTCAGATTGGACCAGAACTCGAGTGTC +
Preference number: 2 (lower is better)
Translates to: GAIEKGFCCMKLTDS*RLIHGFRLDQNSSV
Trigger: GACACTCGAGTTCTGGTCCAATCTGAAGCCATGGATTAATCTCAAAGAATCAGTCAGTTTCATGCAACAGAAGCCCTTTTCAATGGCACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
3UTR CAA 90 bp CGTGCACAGAATGTCAAGGTTTACATCAGTAGTAGGCAGACAGCTTaGGTGATCTCTTGCCTAATTCTATCATACCCACTACAGGACCAT +
Preference number: 2 (lower is better)
Translates to: RAQNVKVYISSRQTA*VISCLILSYPLQDH
Trigger: ATGGTCCTGTAGTGGGTATGATAGAATTAGGCAAGAGATCACCAAAGCTGTCTGCCTACTACTGATGTAAACCTTGACATTCTGTGCACG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507740.5
3UTR-3UTR TCA 90 bp CTTTTCAAACATACTATGTACAGGGCAACAACGGTCACTGGCATAGTGCTAGTTGCTGATGATTGTTCCTaGCCACTTCTTTGGTCTCCT +
Preference number: 2 (lower is better)
Translates to: LFKHTMYRATTVTGIVLVADDCS*PLLWSP
Trigger: AGGAGACCAAAGAAGTGGTCAGGAACAATCATCAGC...AACTAGCACTATGCCAGTGACCGTTGTTGCCCTGTACATAGTATGTTTGAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
3UTR-3UTR TCA 90 bp GGTTTAGTCAGGAGTTGCCGAAAGAGCTCATTCGTGAGCTGGGAGTTGCAAGAAACTTTAACCCCTGTATaGATAATGCTGGTGCTAAAA +
Preference number: 2 (lower is better)
Translates to: GLVRSCRKSSFVSWELQETLTPV*IMLVLK
Trigger: TTTTAGCACCAGCATTATTCATACAGGGGTTAAAGT...TTCTTGCAACTCCCAGCTCACGAATGAGCTCTTTCGGCAACTCCTGACTAAACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507740.5
3UTR-3UTR TCA 90 bp TTAAGACCTGTAGCTGCAGATTTTCTGAGCCATTCTTCCCACTGCACATGCTTTGTTGCCAGAGGAGACTaGCATTTGAATATGTGGACT +
Preference number: 2 (lower is better)
Translates to: LRPVAADFLSHSSHCTCFVARGD*HLNMWT
Trigger: AGTCCACATATTCAAATGTCAGTCTCCTCTGGCAAC...AAAGCATGTGCAGTGGGAAGAATGGCTCAGAAAATCTGCAGCTACAGGTCTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507677.5
3UTR-3UTR GCA 90 bp GGTTTAGTCAGGAGTTGCCGAAAGAGCTCATTCGTGAGCTGGGAGTTGCAAGAAACTCCCAAGTCATGTTaGAAAATCCTTTTCAACATG +
Preference number: 2 (lower is better)
Translates to: GLVRSCRKSSFVSWELQETPKSC*KILFNM
Trigger: CATGTTGAAAAGGATTTTGCAACATGACTTGGGAGT...TTCTTGCAACTCCCAGCTCACGAATGAGCTCTTTCGGCAACTCCTGACTAAACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507740.5
3UTR-3UTR CCA 90 bp CTTTTCAAACATACTATGTACAGGGCAACAACGGTCACTGGCATAGTGCTAGTTTCCATGGCTTCAGATTaGACCAGAACTCGAGTGTCA +
Preference number: 2 (lower is better)
Translates to: LFKHTMYRATTVTGIVLVSMASD*TRTRVS
Trigger: TGACACTCGAGTTCTGGTCCAATCTGAAGCCATGGA...AACTAGCACTATGCCAGTGACCGTTGTTGCCCTGTACATAGTATGTTTGAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
3UTR-3UTR CCA 90 bp GGTTTAGTCAGGAGTTGCCGAAAGAGCTCATTCGTGAGCTGGGAGTTGCAAGAATTTGAGATTAATCCATaGCTTCAGATTGGACCAGAA +
Preference number: 2 (lower is better)
Translates to: GLVRSCRKSSFVSWELQEFEINP*LQIGPE
Trigger: TTCTGGTCCAATCTGAAGCCATGGATTAATCTCAAA...TTCTTGCAACTCCCAGCTCACGAATGAGCTCTTTCGGCAACTCCTGACTAAACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507740.5
3UTR-3UTR CCA 90 bp CTTTTCAAACATACTATGTACAGGGCAACAACGGTCACTGGCATAGTGCTAGTTATAGCTCCATTTCTGTaGCATATCAGGGCTTTGGGG +
Preference number: 2 (lower is better)
Translates to: LFKHTMYRATTVTGIVLVIAPFL*HIRALG
Trigger: CCCCAAAGCCCTGATATGCCACAGAAATGGAGCTAT...AACTAGCACTATGCCAGTGACCGTTGTTGCCCTGTACATAGTATGTTTGAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
3UTR-3UTR CCA 90 bp TTAAGACCTGTAGCTGCAGATTTTCTGAGCCATTCTTCCCACTGCACATGCTTTAAATGGACTCACACTTaGACTAAGCCACTACTGGCT +
Preference number: 2 (lower is better)
Translates to: LRPVAADFLSHSSHCTCFKWTHT*TKPLLA
Trigger: AGCCAGTAGTGGCTTAGTCCAAGTGTGAGTCCATTT...AAAGCATGTGCAGTGGGAAGAATGGCTCAGAAAATCTGCAGCTACAGGTCTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507677.5
3UTR CAA 90 bp GGGGGAATTGGACTCGAGTTGAGTCTTTGGAAATGGAGGAAATGGTaGTTTCCAAGAATAGAGAGACAGCTAGACTTAGATTTCAGTTCG +
Preference number: 2 (lower is better)
Translates to: GGIGLELSLWKWRKW*FPRIERQLDLDFSS
Trigger: CGAACTGAAATCTAAGTCTAGCTGTCTCTCTATTCTTGGAAACAACCATTTCCTCCATTTCCAAAGACTCAACTCGAGTCCAATTCCCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000507740.5
3UTR-3UTR TCA 90 bp GTTCTTTTAACAACTTTACCTGGGTCCATCAGAATGTCAAGACACAGTCTTGGTGTGTGCAACTTCCTCTaGGAACACAGGATTGCTTTG +
Preference number: 2 (lower is better)
Translates to: VLLTTLPGSIRMSRHSLGVCNFL*EHRIAL
Trigger: CAAAGCAATCCTGTGTTCTCAGAGGAAGTTGCACAC...ACCAAGACTGTGTCTTGACATTCTGATGGACCCAGGTAAAGTTGTTAAAAGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
3UTR-3UTR TCA 90 bp GTTCTTTTAACAACTTTACCTGGGTCCATCAGAATGTCAAGACACAGTCTTGGTCTCCTGCTTTTCACCTaGTGCTTCCTAGGATTACAC +
Preference number: 2 (lower is better)
Translates to: VLLTTLPGSIRMSRHSLGLLLFT*CFLGLH
Trigger: GTGTAATCCTAGGAAGCATCAGGTGAAAAGCAGGAG...ACCAAGACTGTGTCTTGACATTCTGATGGACCCAGGTAAAGTTGTTAAAAGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
3UTR-3UTR TCA 90 bp ACTGGAATTCCCTTTACTTTTCAAACATACTATGTACAGGGCAACAACGGTCACCTCCTGCTTTTCACCTaGTGCTTCCTAGGATTACAC +
Preference number: 2 (lower is better)
Translates to: TGIPFTFQTYYVQGNNGHLLLFT*CFLGLH
Trigger: GTGTAATCCTAGGAAGCATCAGGTGAAAAGCAGGAG...GTGACCGTTGTTGCCCTGTACATAGTATGTTTGAAAAGTAAAGGGAATTCCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
3UTR-3UTR TCA 90 bp ACTGGAATTCCCTTTACTTTTCAAACATACTATGTACAGGGCAACAACGGTCACGCTGATGATTGTTCCTaGCCACTTCTTTGGTCTCCT +
Preference number: 2 (lower is better)
Translates to: TGIPFTFQTYYVQGNNGHADDCS*PLLWSP
Trigger: AGGAGACCAAAGAAGTGGTCAGGAACAATCATCAGC...GTGACCGTTGTTGCCCTGTACATAGTATGTTTGAAAAGTAAAGGGAATTCCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
3UTR-3UTR TCA 90 bp CTTTTCAAACATACTATGTACAGGGCAACAACGGTCACTGGCATAGTGCTAGTTCTTAGCATTAGTAATTaGCGTGCCCATGGAGCTACA +
Preference number: 2 (lower is better)
Translates to: LFKHTMYRATTVTGIVLVLSISN*RAHGAT
Trigger: TGTAGCTCCATGGGCACGTCAATTACTAATGCTAAG...AACTAGCACTATGCCAGTGACCGTTGTTGCCCTGTACATAGTATGTTTGAAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
3UTR-3UTR GCA 90 bp CTTTTCAAACATACTATGTACAGGGCAACAACGGTCACTGGCATAGTGCTAGTTACTTCTTTGGTCTCCTaGTTTTCACCTGATGCTTCC +
Preference number: 2 (lower is better)
Translates to: LFKHTMYRATTVTGIVLVTSLVS*FSPDAS
Trigger: GGAAGCATCAGGTGAAAAGCAGGAGACCAAAGAAGT...AACTAGCACTATGCCAGTGACCGTTGTTGCCCTGTACATAGTATGTTTGAAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
3UTR-3UTR CCA 90 bp ACTGGAATTCCCTTTACTTTTCAAACATACTATGTACAGGGCAACAACGGTCACTCCATGGCTTCAGATTaGACCAGAACTCGAGTGTCA +
Preference number: 2 (lower is better)
Translates to: TGIPFTFQTYYVQGNNGHSMASD*TRTRVS
Trigger: TGACACTCGAGTTCTGGTCCAATCTGAAGCCATGGA...GTGACCGTTGTTGCCCTGTACATAGTATGTTTGAAAAGTAAAGGGAATTCCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
3UTR-3UTR CCA 90 bp TCCCAACTGGAATTCCCTTTACTTTTCAAACATACTATGTACAGGGCAACAACGATAGCTCCATTTCTGTaGCATATCAGGGCTTTGGGG +
Preference number: 2 (lower is better)
Translates to: SQLEFPLLFKHTMYRATTIAPFL*HIRALG
Trigger: CCCCAAAGCCCTGATATGCCACAGAAATGGAGCTAT...CGTTGTTGCCCTGTACATAGTATGTTTGAAAAGTAAAGGGAATTCCAGTTGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
3UTR-3UTR CCA 90 bp CTTTTCAAACATACTATGTACAGGGCAACAACGGTCACTGGCATAGTGCTAGTTGCTCTGAATCAAACATaGGGTATGAGAGAGGATCAG +
Preference number: 2 (lower is better)
Translates to: LFKHTMYRATTVTGIVLVALNQT*GMREDQ
Trigger: CTGATCCTCTCTCATACCCCATGTTTGATTCAGAGC...AACTAGCACTATGCCAGTGACCGTTGTTGCCCTGTACATAGTATGTTTGAAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
3UTR-3UTR CCA 90 bp AAGTTTTCTGGCTTCTTTCTTTTTCCTGTGCTGGATGATTCCTTTCACTCTTCCAGGTTCTTTGGCCTTTaGACTCTGGAACTTGCACCA +
Preference number: 2 (lower is better)
Translates to: KFSGFFLFPVLDDSFHSSRFFGL*TLELAP
Trigger: TGGTGCAAGTTCCAGAGTCCAAAGGCCAAAGAACCT...GGAAGAGTGAAAGGAATCATCCAGCACAGGAAAAAGAAAGAAGCCAGAAAACTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000507677.5
3UTR-3UTR GCA 90 bp GTTCTTTTAACAACTTTACCTGGGTCCATCAGAATGTCAAGACACAGTCTTGGTACTTCTTTGGTCTCCTaGTTTTCACCTGATGCTTCC +
Preference number: 2 (lower is better)
Translates to: VLLTTLPGSIRMSRHSLGTSLVS*FSPDAS
Trigger: GGAAGCATCAGGTGAAAAGCAGGAGACCAAAGAAGT...ACCAAGACTGTGTCTTGACATTCTGATGGACCCAGGTAAAGTTGTTAAAAGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
3UTR-3UTR GCA 90 bp ACTGGAATTCCCTTTACTTTTCAAACATACTATGTACAGGGCAACAACGGTCACACTTCTTTGGTCTCCTaGTTTTCACCTGATGCTTCC +
Preference number: 2 (lower is better)
Translates to: TGIPFTFQTYYVQGNNGHTSLVS*FSPDAS
Trigger: GGAAGCATCAGGTGAAAAGCAGGAGACCAAAGAAGT...GTGACCGTTGTTGCCCTGTACATAGTATGTTTGAAAAGTAAAGGGAATTCCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
3UTR-3UTR GCA 90 bp AGCCACAGAATTTTGTTTTTCAGAGTCCAACACATCTTAGCATTAGTAATTGACGTCTGCCACTCTTCCTaGTGGACTGACTGCTCTGAT +
Preference number: 2 (lower is better)
Translates to: SHRILFFRVQHILALVIDVCHSS*WTDCSD
Trigger: ATCAGAGCAGTCAGTCCAGCAGGAAGAGTGGCAGAC...GTCAATTACTAATGCTAAGATGTGTTGGACTCTGAAAAACAAAATTCTGTGGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
3UTR-3UTR CCA 90 bp CTTTTCAAACATACTATGTACAGGGCAACAACGGTCACTGGCATAGTGCTAGTTTGTAACACCGCTTCATaGCTGTATAGCTCCATTTCT +
Preference number: 2 (lower is better)
Translates to: LFKHTMYRATTVTGIVLVCNTAS*LYSSIS
Trigger: AGAAATGGAGCTATACAGCCATGAAGCGGTGTTACA...AACTAGCACTATGCCAGTGACCGTTGTTGCCCTGTACATAGTATGTTTGAAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
3UTR-3UTR CCA 90 bp AGCCACAGAATTTTGTTTTTCAGAGTCCAACACATCTTAGCATTAGTAATTGACTGCCACTCTTCCTGCTaGACTGACTGCTCTGATTCC +
Preference number: 2 (lower is better)
Translates to: SHRILFFRVQHILALVIDCHSSC*TDCSDS
Trigger: GGAATCAGAGCAGTCAGTCCAGCAGGAAGAGTGGCA...GTCAATTACTAATGCTAAGATGTGTTGGACTCTGAAAAACAAAATTCTGTGGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
3UTR-3UTR CCA 90 bp ACTGGAATTCCCTTTACTTTTCAAACATACTATGTACAGGGCAACAACGGTCACGCTCTGAATCAAACATaGGGTATGAGAGAGGATCAG +
Preference number: 2 (lower is better)
Translates to: TGIPFTFQTYYVQGNNGHALNQT*GMREDQ
Trigger: CTGATCCTCTCTCATACCCCATGTTTGATTCAGAGC...GTGACCGTTGTTGCCCTGTACATAGTATGTTTGAAAAGTAAAGGGAATTCCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
3UTR CAA 90 bp AAAATATATGGGACAGATAGGGGGAATTGGACTCGAGTTGAGTCTTaGGAAATGGAGGAAATGGTTGTTTCCAAGAATAGAGAGACAGCT +
Preference number: 2 (lower is better)
Translates to: KIYGTDRGNWTRVES*EMEEMVVSKNRETA
Trigger: AGCTGTCTCTCTATTCTTGGAAACAACCATTTCCTCCATTTCCAAAGACTCAACTCGAGTCCAATTCCCCCTATCTGTCCCATATATTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000507740.5
3UTR-3UTR TCA 90 bp CTTTTCAAACATACTATGTACAGGGCAACAACGGTCACTGGCATAGTGCTAGTTATCAAACATGGGGTATaGGAGAGGATCAGATCAAAA +
Preference number: 2 (lower is better)
Translates to: LFKHTMYRATTVTGIVLVIKHGV*ERIRSK
Trigger: TTTTGATCTGATCCTCTCTCATACCCCATGTTTGAT...AACTAGCACTATGCCAGTGACCGTTGTTGCCCTGTACATAGTATGTTTGAAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
3UTR-3UTR TCA 90 bp ACTGGAATTCCCTTTACTTTTCAAACATACTATGTACAGGGCAACAACGGTCACATAGTGCTAGTTACATaGCTAAACCACAAGTCGAGG +
Preference number: 2 (lower is better)
Translates to: TGIPFTFQTYYVQGNNGHIVLVT*LNHKSR
Trigger: CCTCGACTTGTGGTTTAGTCATGTAACTAGCACTAT...GTGACCGTTGTTGCCCTGTACATAGTATGTTTGAAAAGTAAAGGGAATTCCAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
3UTR-3UTR CCA 90 bp ACTGGAATTCCCTTTACTTTTCAAACATACTATGTACAGGGCAACAACGGTCACTGTAACACCGCTTCATaGCTGTATAGCTCCATTTCT +
Preference number: 2 (lower is better)
Translates to: TGIPFTFQTYYVQGNNGHCNTAS*LYSSIS
Trigger: AGAAATGGAGCTATACAGCCATGAAGCGGTGTTACA...GTGACCGTTGTTGCCCTGTACATAGTATGTTTGAAAAGTAAAGGGAATTCCAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
3UTR-3UTR CCA 90 bp TCCCAACTGGAATTCCCTTTACTTTTCAAACATACTATGTACAGGGCAACAACGTGTAACACCGCTTCATaGCTGTATAGCTCCATTTCT +
Preference number: 2 (lower is better)
Translates to: SQLEFPLLFKHTMYRATTCNTAS*LYSSIS
Trigger: AGAAATGGAGCTATACAGCCATGAAGCGGTGTTACA...CGTTGTTGCCCTGTACATAGTATGTTTGAAAAGTAAAGGGAATTCCAGTTGGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
3UTR-3UTR CCA 90 bp CTAAGACCAGCAGTCCACTTATGTTATCGAGAAGTAGGAGACGGTGATTTCATTGTCAAGACACAGTCTTaGTGTATTTCATATTGCACC +
Preference number: 2 (lower is better)
Translates to: LRPAVHLCYREVGDGDFIVKTQS*CISYCT
Trigger: GGTGCAATATGAAATACACCAAGACTGTGTCTTGAC...AATGAAATCACCGTCTCCTACTTCTCGATAACATAAGTGGACTGCTGGTCTTAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507740.5
3UTR-3UTR CCA 90 bp CTTTTCAAACATACTATGTACAGGGCAACAACGGTCACTGGCATAGTGCTAGTTGTCAAGACACAGTCTTaGTGTATTTCATATTGCACC +
Preference number: 2 (lower is better)
Translates to: LFKHTMYRATTVTGIVLVVKTQS*CISYCT
Trigger: GGTGCAATATGAAATACACCAAGACTGTGTCTTGAC...AACTAGCACTATGCCAGTGACCGTTGTTGCCCTGTACATAGTATGTTTGAAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
3UTR-3UTR TCA 90 bp AGCCACAGAATTTTGTTTTTCAGAGTCCAACACATCTTAGCATTAGTAATTGACGCTGATGATTGTTCCTaGCCACTTCTTTGGTCTCCT +
Preference number: 2 (lower is better)
Translates to: SHRILFFRVQHILALVIDADDCS*PLLWSP
Trigger: AGGAGACCAAAGAAGTGGTCAGGAACAATCATCAGC...GTCAATTACTAATGCTAAGATGTGTTGGACTCTGAAAAACAAAATTCTGTGGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
3UTR-3UTR TCA 90 bp GTTCTTTTAACAACTTTACCTGGGTCCATCAGAATGTCAAGACACAGTCTTGGTATCAAACATGGGGTATaGGAGAGGATCAGATCAAAA +
Preference number: 2 (lower is better)
Translates to: VLLTTLPGSIRMSRHSLGIKHGV*ERIRSK
Trigger: TTTTGATCTGATCCTCTCTCATACCCCATGTTTGAT...ACCAAGACTGTGTCTTGACATTCTGATGGACCCAGGTAAAGTTGTTAAAAGAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
3UTR-3UTR TCA 90 bp CTTTTCAAACATACTATGTACAGGGCAACAACGGTCACTGGCATAGTGCTAGTTTCGTCAAATACATGCTaGCTTACTTTAATGTACTCC +
Preference number: 2 (lower is better)
Translates to: LFKHTMYRATTVTGIVLVSSNTC*LTLMYS
Trigger: GGAGTACATTAAAGTAAGTCAGCATGTATTTGACGA...AACTAGCACTATGCCAGTGACCGTTGTTGCCCTGTACATAGTATGTTTGAAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
3UTR-3UTR TCA 90 bp ACTGGAATTCCCTTTACTTTTCAAACATACTATGTACAGGGCAACAACGGTCACGCACAAAAGATTATGTaGCTGCATCTTAGTATCAGG +
Preference number: 2 (lower is better)
Translates to: TGIPFTFQTYYVQGNNGHAQKIM*LHLSIR
Trigger: CCTGATACTAAGATGCAGTCACATAATCTTTTGTGC...GTGACCGTTGTTGCCCTGTACATAGTATGTTTGAAAAGTAAAGGGAATTCCAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
3UTR-3UTR TCA 90 bp TCCCAACTGGAATTCCCTTTACTTTTCAAACATACTATGTACAGGGCAACAACGGCACAAAAGATTATGTaGCTGCATCTTAGTATCAGG +
Preference number: 2 (lower is better)
Translates to: SQLEFPLLFKHTMYRATTAQKIM*LHLSIR
Trigger: CCTGATACTAAGATGCAGTCACATAATCTTTTGTGC...CGTTGTTGCCCTGTACATAGTATGTTTGAAAAGTAAAGGGAATTCCAGTTGGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
3UTR-3UTR GCA 90 bp GTTCTTTTAACAACTTTACCTGGGTCCATCAGAATGTCAAGACACAGTCTTGGTGAAAAGGGCTTCTGTTaGATGAAACTGACTGATTCT +
Preference number: 2 (lower is better)
Translates to: VLLTTLPGSIRMSRHSLGEKGFC*MKLTDS
Trigger: AGAATCAGTCAGTTTCATGCAACAGAAGCCCTTTTC...ACCAAGACTGTGTCTTGACATTCTGATGGACCCAGGTAAAGTTGTTAAAAGAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
3UTR-3UTR GCA 90 bp CTTTTCAAACATACTATGTACAGGGCAACAACGGTCACTGGCATAGTGCTAGTTACTCCCAAGTCATGTTaGAAAATCCTTTTCAACATG +
Preference number: 2 (lower is better)
Translates to: LFKHTMYRATTVTGIVLVTPKSC*KILFNM
Trigger: CATGTTGAAAAGGATTTTGCAACATGACTTGGGAGT...AACTAGCACTATGCCAGTGACCGTTGTTGCCCTGTACATAGTATGTTTGAAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
3UTR-3UTR CCA 90 bp AGCCACAGAATTTTGTTTTTCAGAGTCCAACACATCTTAGCATTAGTAATTGACATAGCTCCATTTCTGTaGCATATCAGGGCTTTGGGG +
Preference number: 2 (lower is better)
Translates to: SHRILFFRVQHILALVIDIAPFL*HIRALG
Trigger: CCCCAAAGCCCTGATATGCCACAGAAATGGAGCTAT...GTCAATTACTAATGCTAAGATGTGTTGGACTCTGAAAAACAAAATTCTGTGGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
3UTR-3UTR CCA 90 bp ACTGGAATTCCCTTTACTTTTCAAACATACTATGTACAGGGCAACAACGGTCACGTCAAGACACAGTCTTaGTGTATTTCATATTGCACC +
Preference number: 2 (lower is better)
Translates to: TGIPFTFQTYYVQGNNGHVKTQS*CISYCT
Trigger: GGTGCAATATGAAATACACCAAGACTGTGTCTTGAC...GTGACCGTTGTTGCCCTGTACATAGTATGTTTGAAAAGTAAAGGGAATTCCAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
3UTR-3UTR CCA 90 bp CTTTTCAAACATACTATGTACAGGGCAACAACGGTCACTGGCATAGTGCTAGTTTTTAACAACTTTACCTaGGTCCATCAGAATGTCAAG +
Preference number: 2 (lower is better)
Translates to: LFKHTMYRATTVTGIVLVFNNFT*VHQNVK
Trigger: CTTGACATTCTGATGGACCCAGGTAAAGTTGTTAAA...AACTAGCACTATGCCAGTGACCGTTGTTGCCCTGTACATAGTATGTTTGAAAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
3UTR-3UTR TCA 90 bp TCCCAACTGGAATTCCCTTTACTTTTCAAACATACTATGTACAGGGCAACAACGGAACTCGAGTGTCATTaGATTCCAAATCTGATAGTT +
Preference number: 2 (lower is better)
Translates to: SQLEFPLLFKHTMYRATTELECH*IPNLIV
Trigger: AACTATCAGATTTGGAATTCAATGACACTCGAGTTC...CGTTGTTGCCCTGTACATAGTATGTTTGAAAAGTAAAGGGAATTCCAGTTGGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
3UTR-3UTR TCA 90 bp ACTGGAATTCCCTTTACTTTTCAAACATACTATGTACAGGGCAACAACGGTCACGAACTCGAGTGTCATTaGATTCCAAATCTGATAGTT +
Preference number: 2 (lower is better)
Translates to: TGIPFTFQTYYVQGNNGHELECH*IPNLIV
Trigger: AACTATCAGATTTGGAATTCAATGACACTCGAGTTC...GTGACCGTTGTTGCCCTGTACATAGTATGTTTGAAAAGTAAAGGGAATTCCAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
3UTR-3UTR TCA 90 bp GTTCTTTTAACAACTTTACCTGGGTCCATCAGAATGTCAAGACACAGTCTTGGTGAACTCGAGTGTCATTaGATTCCAAATCTGATAGTT +
Preference number: 2 (lower is better)
Translates to: VLLTTLPGSIRMSRHSLGELECH*IPNLIV
Trigger: AACTATCAGATTTGGAATTCAATGACACTCGAGTTC...ACCAAGACTGTGTCTTGACATTCTGATGGACCCAGGTAAAGTTGTTAAAAGAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
3UTR-3UTR TCA 90 bp TCCCAACTGGAATTCCCTTTACTTTTCAAACATACTATGTACAGGGCAACAACGTCGTCAAATACATGCTaGCTTACTTTAATGTACTCC +
Preference number: 2 (lower is better)
Translates to: SQLEFPLLFKHTMYRATTSSNTC*LTLMYS
Trigger: GGAGTACATTAAAGTAAGTCAGCATGTATTTGACGA...CGTTGTTGCCCTGTACATAGTATGTTTGAAAAGTAAAGGGAATTCCAGTTGGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
3UTR-3UTR TCA 90 bp GTTCTTTTAACAACTTTACCTGGGTCCATCAGAATGTCAAGACACAGTCTTGGTACTTTAACCCCTGTATaGATAATGCTGGTGCTAAAA +
Preference number: 2 (lower is better)
Translates to: VLLTTLPGSIRMSRHSLGTLTPV*IMLVLK
Trigger: TTTTAGCACCAGCATTATTCATACAGGGGTTAAAGT...ACCAAGACTGTGTCTTGACATTCTGATGGACCCAGGTAAAGTTGTTAAAAGAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
3UTR-3UTR CCA 90 bp TCCCAACTGGAATTCCCTTTACTTTTCAAACATACTATGTACAGGGCAACAACGTTTGAGATTAATCCATaGCTTCAGATTGGACCAGAA +
Preference number: 2 (lower is better)
Translates to: SQLEFPLLFKHTMYRATTFEINP*LQIGPE
Trigger: TTCTGGTCCAATCTGAAGCCATGGATTAATCTCAAA...CGTTGTTGCCCTGTACATAGTATGTTTGAAAAGTAAAGGGAATTCCAGTTGGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
3UTR GCA 72 bp ACGTGCCCATGGAGCTACAAAGTCTGCCACTCTTCCTaGTGGACTGACTGCTCTGATTCCCGCCCAGAGGAG +
Preference number: 3 (lower is better)
Translates to: TCPWSYKVCHSS*WTDCSDSRPEE
Trigger: CTCCTCTGGGCGGGAATCAGAGCAGTCAGTCCAGCAGGAAGAGTGGCAGACTTTGTAGCTCCATGGGCACGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
3UTR GCA 72 bp GAGAGGAAGACTCACCCAATCCACCATCCAGTCGGCTaGCAATGCAGCTGGAACAAAGCGGGTGAAGAAGGT +
Preference number: 3 (lower is better)
Translates to: ERKTHPIHHPVG*QCSWNKAGEEG
Trigger: ACCTTCTTCACCCGCTTTGTTCCAGCTGCATTGGCAGCCGACTGGATGGTGGATTGGGTGAGTCTTCCTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507677.5
3UTR CCA 72 bp CACCCAATCCACCATCCAGTCGGCTGCCAATGCAGCTaGAACAAAGCGGGTGAAGAAGGTGGGATAACCTTG +
Preference number: 3 (lower is better)
Translates to: HPIHHPVGCQCS*NKAGEEGGITL
Trigger: CAAGGTTATCCCACCTTCTTCACCCGCTTTGTTCCAGCTGCATTGGCAGCCGACTGGATGGTGGATTGGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507677.5
3UTR GCA 72 bp AAGACTCACCCAATCCACCATCCAGTCGGCTGCCAATaGAGCTGGAACAAAGCGGGTGAAGAAGGTGGGATA +
Preference number: 3 (lower is better)
Translates to: KTHPIHHPVGCQ*SWNKAGEEGGI
Trigger: TATCCCACCTTCTTCACCCGCTTTGTTCCAGCTGCATTGGCAGCCGACTGGATGGTGGATTGGGTGAGTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507677.5
3UTR CCA 72 bp GGACATCCAACACTAGGTTCTTTGGCCTTTGGACTCTaGAACTTGCACCAGTGGCTTGCTGGTGGCTCTCAG +
Preference number: 3 (lower is better)
Translates to: GHPTLGSLAFGL*NLHQWLAGGSQ
Trigger: CTGAGAGCCACCAGCAAGCCACTGGTGCAAGTTCCAGAGTCCAAAGGCCAAAGAACCTAGTGTTGGATGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507677.5
3UTR CCA 72 bp TGCCCTTGGACATCCAACACTAGGTTCTTTGGCCTTTaGACTCTGGAACTTGCACCAGTGGCTTGCTGGTGG +
Preference number: 3 (lower is better)
Translates to: CPWTSNTRFFGL*TLELAPVACWW
Trigger: CCACCAGCAAGCCACTGGTGCAAGTTCCAGAGTCCAAAGGCCAAAGAACCTAGTGTTGGATGTCCAAGGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507677.5
3UTR TCA 72 bp CTGATTCCCGCCCAGAGGAGGGCTGATGATTGTTCCTaGCCACTTCTTTGGTCTCCTGCTTTTCACCTGATG +
Preference number: 3 (lower is better)
Translates to: LIPAQRRADDCS*PLLWSPAFHLM
Trigger: CATCAGGTGAAAAGCAGGAGACCAAAGAAGTGGTCAGGAACAATCATCAGCCCTCCTCTGGGCGGGAATCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
3UTR-3UTR CAA 90 bp GAACTCTGCAGGGTTTCCTTCTCCCAGTTGAGGAATCGCCCCAGAAGGATATGGTTCCTGACCACTTCTTaGGTCTCCTGCTTTTCACCT +
Preference number: 3 (lower is better)
Translates to: ELCRVSFSQLRNRPRRIWFLTTS*VSCFSP
Trigger: AGGTGAAAAGCAGGAGACCAAAGAAGTGGTCAGGAA...CCATATCCTTCTGGGGCGATTCCTCAACTGGGAGAAGGAAACCCTGCAGAGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507740.5
3UTR-3UTR CAA 90 bp TTAAGACCTGTAGCTGCAGATTTTCTGAGCCATTCTTCCCACTGCACATGCTTTACTTGCACCAGTGGCTaGCTGGTGGCTCTCAGGCCT +
Preference number: 3 (lower is better)
Translates to: LRPVAADFLSHSSHCTCFTCTSG*LVALRP
Trigger: AGGCCTGAGAGCCACCAGCAAGCCACTGGTGCAAGT...AAAGCATGTGCAGTGGGAAGAATGGCTCAGAAAATCTGCAGCTACAGGTCTTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507677.5
3UTR-3UTR CAA 90 bp TGCTGGATGATTCCTTTCACTCTTCCTGCCCTTGGACATCCAACACTAGGTTCTTTTGGACTCTGGAACTaGCACCAGTGGCTTGCTGGT +
Preference number: 3 (lower is better)
Translates to: CWMIPFTLPALGHPTLGSFGLWN*HQWLAG
Trigger: ACCAGCAAGCCACTGGTGCAAGTTCCAGAGTCCAAA...AGAACCTAGTGTTGGATGTCCAAGGGCAGGAAGAGTGAAAGGAATCATCCAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507677.5
3UTR GCA 72 bp TCATACCCACTACAGGACCATCATATCCTTTATTGTTaGCTATGGAGCCTTGGCATCTGGGGTCCCTGGGAA +
Preference number: 3 (lower is better)
Translates to: SYPLQDHHILYC*LWSLGIWGPWE
Trigger: TTCCCAGGGACCCCAGATGCCAAGGCTCCATAGGCAACAATAAAGGATATGATGGTCCTGTAGTGGGTATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507740.5
3UTR CCA 72 bp CCACTACAGGACCATCATATCCTTTATTGTTGCCTATaGAGCCTTGGCATCTGGGGTCCCTGGGAAAGTGAA +
Preference number: 3 (lower is better)
Translates to: PLQDHHILYCCL*SLGIWGPWESE
Trigger: TTCACTTTCCCAGGGACCCCAGATGCCAAGGCTCCATAGGCAACAATAAAGGATATGATGGTCCTGTAGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507740.5
3UTR CCA 72 bp CCTGTGCTGGATGATTCCTTTCACTCTTCCTGCCCTTaGACATCCAACACTAGGTTCTTTGGCCTTTGGACT +
Preference number: 3 (lower is better)
Translates to: PVLDDSFHSSCP*TSNTRFFGLWT
Trigger: AGTCCAAAGGCCAAAGAACCTAGTGTTGGATGTCCAAGGGCAGGAAGAGTGAAAGGAATCATCCAGCACAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507677.5
3UTR-3UTR CAA 90 bp CACAGAACCCTGAGGGCATCACGAGCTGAGGGAGTTGAGACAAACACATTGAGCACTCGAGTTGAGTCTTaGGAAATGGAGGAAATGGTT +
Preference number: 3 (lower is better)
Translates to: HRTLRASRAEGVETNTLSTRVES*EMEEMV
Trigger: AACCATTTCCTCCATTTCCAAAGACTCAACTCGAGT...GCTCAATGTGTTTGTCTCAACTCCCTCAGCTCGTGATGCCCTCAGGGTTCTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507740.5
3UTR-3UTR CAA 90 bp CACAGAACCCTGAGGGCATCACGAGCTGAGGGAGTTGAGACAAACACATTGAGCAGCTTTGGTGATCTCTaGCCTAATTCTATCATACCC +
Preference number: 3 (lower is better)
Translates to: HRTLRASRAEGVETNTLSSFGDL*PNSIIP
Trigger: GGGTATGATAGAATTAGGCAAGAGATCACCAAAGCT...GCTCAATGTGTTTGTCTCAACTCCCTCAGCTCGTGATGCCCTCAGGGTTCTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507740.5
3UTR CCA 72 bp TCCTTCTCCCAGTTGAGGAATCGCCCCAGAAGGATATaGAGAAATCCTCTCACCCATTCATATCCACACGTA +
Preference number: 3 (lower is better)
Translates to: SFSQLRNRPRRI*RNPLTHSYPHV
Trigger: TACGTGTGGATATGAATGGGTGAGAGGATTTCTCCATATCCTTCTGGGGCGATTCCTCAACTGGGAGAAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507740.5
3UTR CCA 72 bp TTAGTCAGGAGTTGCCGAAAGAGCTCATTCGTGAGCTaGGAGTTGCAAGAAGGGACTCGCATGGATCATTAT +
Preference number: 3 (lower is better)
Translates to: LVRSCRKSSFVS*ELQEGTRMDHY
Trigger: ATAATGATCCATGCGAGTCCCTTCTTGCAACTCCCAGCTCACGAATGAGCTCTTTCGGCAACTCCTGACTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507740.5
3UTR CCA 72 bp CATATCCTTTATTGTTGCCTATGGAGCCTTGGCATCTaGGGTCCCTGGGAAAGTGAAGGTGTTGGCATCAAT +
Preference number: 3 (lower is better)
Translates to: HILYCCLWSLGI*GPWESEGVGIN
Trigger: ATTGATGCCAACACCTTCACTTTCCCAGGGACCCCAGATGCCAAGGCTCCATAGGCAACAATAAAGGATATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507740.5
3UTR-3UTR CAA 90 bp CCTCTCACCCATTCATATCCACACGTAGAAGCTAGTCTCCGGACAGGTTGTTACCCAAAGGCAGGGGTTTaGACTTTAGGAGATTTTCAC +
Preference number: 3 (lower is better)
Translates to: PLTHSYPHVEASLRTGCYPKAGV*TLGDFH
Trigger: GTGAAAATCTCCTAAAGTCAAAACCCCTGCCTTTGG...GTAACAACCTGTCCGGAGACTAGCTTCTACGTGTGGATATGAATGGGTGAGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507740.5
3UTR-3UTR CAA 90 bp CACAGAACCCTGAGGGCATCACGAGCTGAGGGAGTTGAGACAAACACATTGAGCTGTCAAGACACAGTCTaGGTGTATTTCATATTGCAC +
Preference number: 3 (lower is better)
Translates to: HRTLRASRAEGVETNTLSCQDTV*VYFILH
Trigger: GTGCAATATGAAATACACCAAGACTGTGTCTTGACA...GCTCAATGTGTTTGTCTCAACTCCCTCAGCTCGTGATGCCCTCAGGGTTCTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507740.5
3UTR-3UTR CAA 90 bp TTAAGACCTGTAGCTGCAGATTTTCTGAGCCATTCTTCCCACTGCACATGCTTTTCTCCCTTCCCCAGCTaGCAGAAATTCTATGGTGGG +
Preference number: 3 (lower is better)
Translates to: LRPVAADFLSHSSHCTCFSPFPS*QKFYGG
Trigger: CCCACCATAGAATTTCTGCAAGCTGGGGAAGGGAGA...AAAGCATGTGCAGTGGGAAGAATGGCTCAGAAAATCTGCAGCTACAGGTCTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000507677.5
3UTR-3UTR CAA 90 bp CTGAAGCAGACTCCCATGAGAACTCTGCAGGGTTTCCTTCTCCCAGTTGAGGAACTTTGTATCACCCTGTaGCATTCTCTCTCCTTTTTA +
Preference number: 3 (lower is better)
Translates to: LKQTPMRTLQGFLLPVEELCITL*HSLSFL
Trigger: TAAAAAGGAGAGAGAATGCAACAGGGTGATACAAAG...TTCCTCAACTGGGAGAAGGAAACCCTGCAGAGTTCTCATGGGAGTCTGCTTCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000507740.5
3UTR-3UTR CAA 90 bp GAACTCTGCAGGGTTTCCTTCTCCCAGTTGAGGAATCGCCCCAGAAGGATATGGTACTCCCAAGTCATGTaGCAAAATCCTTTTCAACAT +
Preference number: 3 (lower is better)
Translates to: ELCRVSFSQLRNRPRRIWYSQVM*QNPFQH
Trigger: ATGTTGAAAAGGATTTTGCAACATGACTTGGGAGTA...CCATATCCTTCTGGGGCGATTCCTCAACTGGGAGAAGGAAACCCTGCAGAGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000507740.5
3UTR-3UTR CAA 90 bp CACAGAACCCTGAGGGCATCACGAGCTGAGGGAGTTGAGACAAACACATTGAGCAAATGGAGGAAATGGTaGTTTCCAAGAATAGAGAGA +
Preference number: 3 (lower is better)
Translates to: HRTLRASRAEGVETNTLSKWRKW*FPRIER
Trigger: TCTCTCTATTCTTGGAAACAACCATTTCCTCCATTT...GCTCAATGTGTTTGTCTCAACTCCCTCAGCTCGTGATGCCCTCAGGGTTCTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507740.5
3UTR-3UTR CAA 90 bp TTAAGACCTGTAGCTGCAGATTTTCTGAGCCATTCTTCCCACTGCACATGCTTTCCAACACTAGGTTCTTaGGCCTTTGGACTCTGGAAC +
Preference number: 3 (lower is better)
Translates to: LRPVAADFLSHSSHCTCFPTLGS*AFGLWN
Trigger: GTTCCAGAGTCCAAAGGCCAAAGAACCTAGTGTTGG...AAAGCATGTGCAGTGGGAAGAATGGCTCAGAAAATCTGCAGCTACAGGTCTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507677.5
3UTR TCA 72 bp GTTCCTGACCACTTCTTTGGTCTCCTGCTTTTCACCTaGTGCTTCCTAGGATTACACTCCTCACCTGTAACA +
Preference number: 3 (lower is better)
Translates to: VPDHFFGLLLFT*CFLGLHSSPVT
Trigger: TGTTACAGGTGAGGAGTGTAATCCTAGGAAGCATCAGGTGAAAAGCAGGAGACCAAAGAAGTGGTCAGGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
3UTR GCA 72 bp GGACTAAGCCACTACTGGCTTCTCCCTTCCCCAGCTTaGAGAAATTCTATGGTGGGACTTTGTCTTATAATC +
Preference number: 3 (lower is better)
Translates to: GLSHYWLLPSPA*RNSMVGLCLII
Trigger: GATTATAAGACAAAGTCCCACCATAGAATTTCTGCAAGCTGGGGAAGGGAGAAGCCAGTAGTGGCTTAGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507677.5
3UTR GCA 72 bp CTTTTTCCTGTGCTGGATGATTCCTTTCACTCTTCCTaGCCTTGGACATCCAACACTAGGTTCTTTGGCCTT +
Preference number: 3 (lower is better)
Translates to: LFPVLDDSFHSS*PWTSNTRFFGL
Trigger: AAGGCCAAAGAACCTAGTGTTGGATGTCCAAGGGCAGGAAGAGTGAAAGGAATCATCCAGCACAGGAAAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000507677.5
3UTR GCA 72 bp GCACAATGTGTGCAACTTCCTCTGAGAACACAGGATTaGTTTGTATCCCTAGAAACAGGCTCAGAAGACACA +
Preference number: 3 (lower is better)
Translates to: AQCVQLPLRTQD*FVSLETGSEDT
Trigger: TGTGTCTTCTGAGCCTGTTTCTAGGGATACAAAGCAATCCTGTGTTCTCAGAGGAAGTTGCACACATTGTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
3UTR-3UTR CAA 90 bp GGTTTAGTCAGGAGTTGCCGAAAGAGCTCATTCGTGAGCTGGGAGTTGCAAGAAAAACTGACTGATTCTTaGAGATTAATCCATGGCTTC +
Preference number: 3 (lower is better)
Translates to: GLVRSCRKSSFVSWELQEKLTDS*RLIHGF
Trigger: GAAGCCATGGATTAATCTCAAAGAATCAGTCAGTTT...TTCTTGCAACTCCCAGCTCACGAATGAGCTCTTTCGGCAACTCCTGACTAAACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000507740.5
3UTR-3UTR CAA 90 bp CTTTTCAAACATACTATGTACAGGGCAACAACGGTCACTGGCATAGTGCTAGTTTTCCTGACCACTTCTTaGGTCTCCTGCTTTTCACCT +
Preference number: 3 (lower is better)
Translates to: LFKHTMYRATTVTGIVLVFLTTS*VSCFSP
Trigger: AGGTGAAAAGCAGGAGACCAAAGAAGTGGTCAGGAA...AACTAGCACTATGCCAGTGACCGTTGTTGCCCTGTACATAGTATGTTTGAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
3UTR-3UTR CAA 90 bp TGCTGGATGATTCCTTTCACTCTTCCTGCCCTTGGACATCCAACACTAGGTTCTTATATCCTATTAGTTTaGTCCCTCTGGAGAACACTG +
Preference number: 3 (lower is better)
Translates to: CWMIPFTLPALGHPTLGSYILLV*SLWRTL
Trigger: CAGTGTTCTCCAGAGGGACAAAACTAATAGGATATA...AGAACCTAGTGTTGGATGTCCAAGGGCAGGAAGAGTGAAAGGAATCATCCAGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507677.5
3UTR TCA 72 bp CCATGGCTTCAGATTGGACCAGAACTCGAGTGTCATTaGATTCCAAATCTGATAGTTCTTCACAGCTCTGCT +
Preference number: 3 (lower is better)
Translates to: PWLQIGPELECH*IPNLIVLHSSA
Trigger: AGCAGAGCTGTGAAGAACTATCAGATTTGGAATTCAATGACACTCGAGTTCTGGTCCAATCTGAAGCCATGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
3UTR-3UTR CAA 90 bp TCCCAACTGGAATTCCCTTTACTTTTCAAACATACTATGTACAGGGCAACAACGTTCCTGACCACTTCTTaGGTCTCCTGCTTTTCACCT +
Preference number: 3 (lower is better)
Translates to: SQLEFPLLFKHTMYRATTFLTTS*VSCFSP
Trigger: AGGTGAAAAGCAGGAGACCAAAGAAGTGGTCAGGAA...CGTTGTTGCCCTGTACATAGTATGTTTGAAAAGTAAAGGGAATTCCAGTTGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
3UTR-3UTR CAA 90 bp CTTTTCAAACATACTATGTACAGGGCAACAACGGTCACTGGCATAGTGCTAGTTCCAAAGGCAGGGGTTTaGACTTTAGGAGATTTTCAC +
Preference number: 3 (lower is better)
Translates to: LFKHTMYRATTVTGIVLVPKAGV*TLGDFH
Trigger: GTGAAAATCTCCTAAAGTCAAAACCCCTGCCTTTGG...AACTAGCACTATGCCAGTGACCGTTGTTGCCCTGTACATAGTATGTTTGAAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
3UTR-3UTR CAA 90 bp GTTCTTTTAACAACTTTACCTGGGTCCATCAGAATGTCAAGACACAGTCTTGGTGAACTTAGGAGAAATTaGACCTTGCAGCTCCACCCA +
Preference number: 3 (lower is better)
Translates to: VLLTTLPGSIRMSRHSLGELRRN*TLQLHP
Trigger: TGGGTGGAGCTGCAAGGTCAAATTTCTCCTAAGTTC...ACCAAGACTGTGTCTTGACATTCTGATGGACCCAGGTAAAGTTGTTAAAAGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
3UTR-3UTR CAA 90 bp TCCCAACTGGAATTCCCTTTACTTTTCAAACATACTATGTACAGGGCAACAACGGAACTTAGGAGAAATTaGACCTTGCAGCTCCACCCA +
Preference number: 3 (lower is better)
Translates to: SQLEFPLLFKHTMYRATTELRRN*TLQLHP
Trigger: TGGGTGGAGCTGCAAGGTCAAATTTCTCCTAAGTTC...CGTTGTTGCCCTGTACATAGTATGTTTGAAAAGTAAAGGGAATTCCAGTTGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
3UTR-3UTR CAA 90 bp TGGAACAAAGCGGGTGAAGAAGGTGGGATAACCTTGCTTGCTAAGTTTTCTGGCTTCTATGGTGGGACTTaGTCTTATAATCATATGAGC +
Preference number: 3 (lower is better)
Translates to: WNKAGEEGGITLLAKFSGFYGGT*SYNHMS
Trigger: GCTCATATGATTATAAGACAAAGTCCCACCATAGAA...GCCAGAAAACTTAGCAAGCAAGGTTATCCCACCTTCTTCACCCGCTTTGTTCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507677.5
3UTR TCA 72 bp CGAGCTGAGGGAGTTGAGACAAACACATTGAGCACATaGTTTTTACGTGCACAGAATGTCAAGGTTTACATC +
Preference number: 3 (lower is better)
Translates to: RAEGVETNTLST*FLRAQNVKVYI
Trigger: GATGTAAACCTTGACATTCTGTGCACGTAAAAATCATGTGCTCAATGTGTTTGTCTCAACTCCCTCAGCTCG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000507740.5
3UTR GCA 72 bp TACATCAGTAGTAGGCAGACAGCTTTGGTGATCTCTTaGCTAATTCTATCATACCCACTACAGGACCATCAT +
Preference number: 3 (lower is better)
Translates to: YISSRQTALVIS*LILSYPLQDHH
Trigger: ATGATGGTCCTGTAGTGGGTATGATAGAATTAGGCAAGAGATCACCAAAGCTGTCTGCCTACTACTGATGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507740.5
3UTR CCA 72 bp CAAACTCCATATTTTCCAGGTGAGGAAATGAAATCCTaGAGATTAAGTGACCTGAGTCAGGGCATATGGAAG +
Preference number: 3 (lower is better)
Translates to: QTPYFPGEEMKS*RLSDLSQGIWK
Trigger: CTTCCATATGCCCTGACTCAGGTCACTTAATCTCCAGGATTTCATTTCCTCACCTGGAAAATATGGAGTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507740.5
3UTR-3UTR CAA 90 bp CTAAGACCAGCAGTCCACTTATGTTATCGAGAAGTAGGAGACGGTGATTTCATTTCTGAGAACACAGGATaGCTTTGTATCCCTAGAAAC +
Preference number: 3 (lower is better)
Translates to: LRPAVHLCYREVGDGDFISENTG*LCIPRN
Trigger: GTTTCTAGGGATACAAAGCAATCCTGTGTTCTCAGA...AATGAAATCACCGTCTCCTACTTCTCGATAACATAAGTGGACTGCTGGTCTTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507740.5
3UTR CCA 72 bp TTTCAAACATACTATGTACAGGGCAACAACGGTCACTaGCATAGTGCTAGTTACATGACTAAACCACAAGTC +
Preference number: 3 (lower is better)
Translates to: FQTYYVQGNNGH*HSASYMTKPQV
Trigger: GACTTGTGGTTTAGTCATGTAACTAGCACTATGCCAGTGACCGTTGTTGCCCTGTACATAGTATGTTTGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
3UTR-3UTR CAA 90 bp GTTCTTTTAACAACTTTACCTGGGTCCATCAGAATGTCAAGACACAGTCTTGGTTCTGAGAACACAGGATaGCTTTGTATCCCTAGAAAC +
Preference number: 3 (lower is better)
Translates to: VLLTTLPGSIRMSRHSLGSENTG*LCIPRN
Trigger: GTTTCTAGGGATACAAAGCAATCCTGTGTTCTCAGA...ACCAAGACTGTGTCTTGACATTCTGATGGACCCAGGTAAAGTTGTTAAAAGAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
3UTR-3UTR CAA 90 bp ACTGGAATTCCCTTTACTTTTCAAACATACTATGTACAGGGCAACAACGGTCACTCTGAGAACACAGGATaGCTTTGTATCCCTAGAAAC +
Preference number: 3 (lower is better)
Translates to: TGIPFTFQTYYVQGNNGHSENTG*LCIPRN
Trigger: GTTTCTAGGGATACAAAGCAATCCTGTGTTCTCAGA...GTGACCGTTGTTGCCCTGTACATAGTATGTTTGAAAAGTAAAGGGAATTCCAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
3UTR-3UTR CAA 90 bp CTTTTCAAACATACTATGTACAGGGCAACAACGGTCACTGGCATAGTGCTAGTTAATATAAAGGTGCCATaGAAAAGGGCTTCTGTTGCA +
Preference number: 3 (lower is better)
Translates to: LFKHTMYRATTVTGIVLVNIKVP*KRASVA
Trigger: TGCAACAGAAGCCCTTTTCAATGGCACCTTTATATT...AACTAGCACTATGCCAGTGACCGTTGTTGCCCTGTACATAGTATGTTTGAAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
3UTR-3UTR CAA 90 bp CTTTTCAAACATACTATGTACAGGGCAACAACGGTCACTGGCATAGTGCTAGTTTGTAGCCACAGAATTTaGTTTTTCAGAGTCCAACAC +
Preference number: 3 (lower is better)
Translates to: LFKHTMYRATTVTGIVLVCSHRI*FFRVQH
Trigger: GTGTTGGACTCTGAAAAACAAAATTCTGTGGCTACA...AACTAGCACTATGCCAGTGACCGTTGTTGCCCTGTACATAGTATGTTTGAAAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
3UTR-3UTR CAA 90 bp CTTTTCAAACATACTATGTACAGGGCAACAACGGTCACTGGCATAGTGCTAGTTTGTCAAGACACAGTCTaGGTGTATTTCATATTGCAC +
Preference number: 3 (lower is better)
Translates to: LFKHTMYRATTVTGIVLVCQDTV*VYFILH
Trigger: GTGCAATATGAAATACACCAAGACTGTGTCTTGACA...AACTAGCACTATGCCAGTGACCGTTGTTGCCCTGTACATAGTATGTTTGAAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
3UTR-3UTR CAA 90 bp GTTCTTTTAACAACTTTACCTGGGTCCATCAGAATGTCAAGACACAGTCTTGGTAATATAAAGGTGCCATaGAAAAGGGCTTCTGTTGCA +
Preference number: 3 (lower is better)
Translates to: VLLTTLPGSIRMSRHSLGNIKVP*KRASVA
Trigger: TGCAACAGAAGCCCTTTTCAATGGCACCTTTATATT...ACCAAGACTGTGTCTTGACATTCTGATGGACCCAGGTAAAGTTGTTAAAAGAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
3UTR-3UTR CAA 90 bp ACTGGAATTCCCTTTACTTTTCAAACATACTATGTACAGGGCAACAACGGTCACAATATAAAGGTGCCATaGAAAAGGGCTTCTGTTGCA +
Preference number: 3 (lower is better)
Translates to: TGIPFTFQTYYVQGNNGHNIKVP*KRASVA
Trigger: TGCAACAGAAGCCCTTTTCAATGGCACCTTTATATT...GTGACCGTTGTTGCCCTGTACATAGTATGTTTGAAAAGTAAAGGGAATTCCAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
3UTR-3UTR CAA 90 bp GTTCTTTTAACAACTTTACCTGGGTCCATCAGAATGTCAAGACACAGTCTTGGTCTTTGTATCACCCTGTaGCATTCTCTCTCCTTTTTA +
Preference number: 3 (lower is better)
Translates to: VLLTTLPGSIRMSRHSLGLCITL*HSLSFL
Trigger: TAAAAAGGAGAGAGAATGCAACAGGGTGATACAAAG...ACCAAGACTGTGTCTTGACATTCTGATGGACCCAGGTAAAGTTGTTAAAAGAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
3UTR-3UTR CAA 90 bp TCCCAACTGGAATTCCCTTTACTTTTCAAACATACTATGTACAGGGCAACAACGCTTTGTATCACCCTGTaGCATTCTCTCTCCTTTTTA +
Preference number: 3 (lower is better)
Translates to: SQLEFPLLFKHTMYRATTLCITL*HSLSFL
Trigger: TAAAAAGGAGAGAGAATGCAACAGGGTGATACAAAG...CGTTGTTGCCCTGTACATAGTATGTTTGAAAAGTAAAGGGAATTCCAGTTGGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
3UTR-3UTR CAA 90 bp ACTGGAATTCCCTTTACTTTTCAAACATACTATGTACAGGGCAACAACGGTCACCTTTGTATCACCCTGTaGCATTCTCTCTCCTTTTTA +
Preference number: 3 (lower is better)
Translates to: TGIPFTFQTYYVQGNNGHLCITL*HSLSFL
Trigger: TAAAAAGGAGAGAGAATGCAACAGGGTGATACAAAG...GTGACCGTTGTTGCCCTGTACATAGTATGTTTGAAAAGTAAAGGGAATTCCAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
3UTR-3UTR CAA 90 bp GTTCTTTTAACAACTTTACCTGGGTCCATCAGAATGTCAAGACACAGTCTTGGTAAACATGGTGTATCTTaGTATCACCCTGTTGCATTC +
Preference number: 3 (lower is better)
Translates to: VLLTTLPGSIRMSRHSLGKHGVS*YHPVAF
Trigger: GAATGCAACAGGGTGATACAAAGATACACCATGTTT...ACCAAGACTGTGTCTTGACATTCTGATGGACCCAGGTAAAGTTGTTAAAAGAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
3UTR-3UTR CAA 90 bp TCCCAACTGGAATTCCCTTTACTTTTCAAACATACTATGTACAGGGCAACAACGAAACATGGTGTATCTTaGTATCACCCTGTTGCATTC +
Preference number: 3 (lower is better)
Translates to: SQLEFPLLFKHTMYRATTKHGVS*YHPVAF
Trigger: GAATGCAACAGGGTGATACAAAGATACACCATGTTT...CGTTGTTGCCCTGTACATAGTATGTTTGAAAAGTAAAGGGAATTCCAGTTGGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
3UTR-3UTR CAA 90 bp CTTTTCAAACATACTATGTACAGGGCAACAACGGTCACTGGCATAGTGCTAGTTTACTCCCAAGTCATGTaGCAAAATCCTTTTCAACAT +
Preference number: 3 (lower is better)
Translates to: LFKHTMYRATTVTGIVLVYSQVM*QNPFQH
Trigger: ATGTTGAAAAGGATTTTGCAACATGACTTGGGAGTA...AACTAGCACTATGCCAGTGACCGTTGTTGCCCTGTACATAGTATGTTTGAAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
3UTR-3UTR CAA 90 bp TCCCAACTGGAATTCCCTTTACTTTTCAAACATACTATGTACAGGGCAACAACGTGTCAAGACACAGTCTaGGTGTATTTCATATTGCAC +
Preference number: 3 (lower is better)
Translates to: SQLEFPLLFKHTMYRATTCQDTV*VYFILH
Trigger: GTGCAATATGAAATACACCAAGACTGTGTCTTGACA...CGTTGTTGCCCTGTACATAGTATGTTTGAAAAGTAAAGGGAATTCCAGTTGGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
3UTR-3UTR CAA 90 bp CTAAGACCAGCAGTCCACTTATGTTATCGAGAAGTAGGAGACGGTGATTTCATTCTATTAAATCAATTGTaGCTGGTACACAGGTGTCTA +
Preference number: 3 (lower is better)
Translates to: LRPAVHLCYREVGDGDFILLNQL*LVHRCL
Trigger: TAGACACCTGTGTACCAGCAACAATTGATTTAATAG...AATGAAATCACCGTCTCCTACTTCTCGATAACATAAGTGGACTGCTGGTCTTAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507740.5
3UTR-3UTR CAA 90 bp CTTTTCAAACATACTATGTACAGGGCAACAACGGTCACTGGCATAGTGCTAGTTCTATTAAATCAATTGTaGCTGGTACACAGGTGTCTA +
Preference number: 3 (lower is better)
Translates to: LFKHTMYRATTVTGIVLVLLNQL*LVHRCL
Trigger: TAGACACCTGTGTACCAGCAACAATTGATTTAATAG...AACTAGCACTATGCCAGTGACCGTTGTTGCCCTGTACATAGTATGTTTGAAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
3UTR-3UTR CAA 90 bp ACTGGAATTCCCTTTACTTTTCAAACATACTATGTACAGGGCAACAACGGTCACGGTCTATTAAATCAATaGTTGCTGGTACACAGGTGT +
Preference number: 3 (lower is better)
Translates to: TGIPFTFQTYYVQGNNGHGLLNQ*LLVHRC
Trigger: ACACCTGTGTACCAGCAACAATTGATTTAATAGACC...GTGACCGTTGTTGCCCTGTACATAGTATGTTTGAAAAGTAAAGGGAATTCCAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
3UTR CCA 72 bp GCAAATTCAGAGGCATCTACAGCTCTGAATCAAACATaGGGTATGAGAGAGGATCAGATCAAAACTTGTAAT +
Preference number: 3 (lower is better)
Translates to: ANSEASTALNQT*GMREDQIKTCN
Trigger: ATTACAAGTTTTGATCTGATCCTCTCTCATACCCCATGTTTGATTCAGAGCTGTAGATGCCTCTGAATTTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
3UTR-3UTR CAA 90 bp TCCCAACTGGAATTCCCTTTACTTTTCAAACATACTATGTACAGGGCAACAACGAGAACTCGAGTGTCATaGAATTCCAAATCTGATAGT +
Preference number: 3 (lower is better)
Translates to: SQLEFPLLFKHTMYRATTRTRVS*NSKSDS
Trigger: ACTATCAGATTTGGAATTCAATGACACTCGAGTTCT...CGTTGTTGCCCTGTACATAGTATGTTTGAAAAGTAAAGGGAATTCCAGTTGGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
3UTR-3UTR CAA 90 bp GTTCTTTTAACAACTTTACCTGGGTCCATCAGAATGTCAAGACACAGTCTTGGTAAACTGACTGATTCTTaGAGATTAATCCATGGCTTC +
Preference number: 3 (lower is better)
Translates to: VLLTTLPGSIRMSRHSLGKLTDS*RLIHGF
Trigger: GAAGCCATGGATTAATCTCAAAGAATCAGTCAGTTT...ACCAAGACTGTGTCTTGACATTCTGATGGACCCAGGTAAAGTTGTTAAAAGAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
3UTR-3UTR CAA 90 bp TCCCAACTGGAATTCCCTTTACTTTTCAAACATACTATGTACAGGGCAACAACGAAACTGACTGATTCTTaGAGATTAATCCATGGCTTC +
Preference number: 3 (lower is better)
Translates to: SQLEFPLLFKHTMYRATTKLTDS*RLIHGF
Trigger: GAAGCCATGGATTAATCTCAAAGAATCAGTCAGTTT...CGTTGTTGCCCTGTACATAGTATGTTTGAAAAGTAAAGGGAATTCCAGTTGGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
3UTR-3UTR CAA 90 bp AGCCACAGAATTTTGTTTTTCAGAGTCCAACACATCTTAGCATTAGTAATTGACAGAACTCGAGTGTCATaGAATTCCAAATCTGATAGT +
Preference number: 3 (lower is better)
Translates to: SHRILFFRVQHILALVIDRTRVS*NSKSDS
Trigger: ACTATCAGATTTGGAATTCAATGACACTCGAGTTCT...GTCAATTACTAATGCTAAGATGTGTTGGACTCTGAAAAACAAAATTCTGTGGCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR TCA 90 bp GGACTCTGGAACTTGCACCAGTGGCTTGCTGGTGGCTCTCAGGCCTTTGACCACTGCACTCCAGCCTGGTaGCAGAGCAGGACTCTGTCT +
Preference number: 4 (lower is better)
Translates to: GLWNLHQWLAGGSQAFDHCTPAW*QSRTLS
Trigger: AGACAGAGTCCTGCTCTGTCACCAGGCTGGAGTGCA...GTGGTCAAAGGCCTGAGAGCCACCAGCAAGCCACTGGTGCAAGTTCCAGAGTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507677.5
CDS-3UTR TCA 90 bp ATTACACTCCTCACCTGTAACACCGCTTCATGGCTGTATAGCTCCATTTCTGTGGGCTGCAGAGGCGGCTaGGAGGCCGCCGGGATGGGA +
Preference number: 4 (lower is better)
Translates to: ITLLTCNTASWLYSSISVGCRGG*EAAGMG
Trigger: TCCCATCCCGGCGGCCTCTCAGCCGCCTCTGCAGCC...CACAGAAATGGAGCTATACAGCCATGAAGCGGTGTTACAGGTGAGGAGTGTAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CCA 90 bp GGACTCTGGAACTTGCACCAGTGGCTTGCTGGTGGCTCTCAGGCCTTTGACCACGGACTAAGCCACTACTaGCTTCTCCCTTCCCCAGCT +
Preference number: 4 (lower is better)
Translates to: GLWNLHQWLAGGSQAFDHGLSHY*LLPSPA
Trigger: AGCTGGGGAAGGGAGAAGCCAGTAGTGGCTTAGTCC...GTGGTCAAAGGCCTGAGAGCCACCAGCAAGCCACTGGTGCAAGTTCCAGAGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507677.5
CDS-3UTR TCA 90 bp AGAAACAGGCTCAGAAGACACAACATTAAGCATGCAGTGTTACCAGGGTTTGCAGGCTGCAGAGGCGGCTaGGAGGCCGCCGGGATGGGA +
Preference number: 4 (lower is better)
Translates to: RNRLRRHNIKHAVLPGFAGCRGG*EAAGMG
Trigger: TCCCATCCCGGCGGCCTCTCAGCCGCCTCTGCAGCC...TGCAAACCCTGGTAACACTGCATGCTTAATGTTGTGTCTTCTGAGCCTGTTTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CCA 90 bp GGACTCTGGAACTTGCACCAGTGGCTTGCTGGTGGCTCTCAGGCCTTTGACCACGGCTGCCAATGCAGCTaGAACAAAGCGGGTGAAGAA +
Preference number: 4 (lower is better)
Translates to: GLWNLHQWLAGGSQAFDHGCQCS*NKAGEE
Trigger: TTCTTCACCCGCTTTGTTCCAGCTGCATTGGCAGCC...GTGGTCAAAGGCCTGAGAGCCACCAGCAAGCCACTGGTGCAAGTTCCAGAGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507677.5
CDS-3UTR GCA 90 bp GGACTCTGGAACTTGCACCAGTGGCTTGCTGGTGGCTCTCAGGCCTTTGACCACCTCCCTTCCCCAGCTTaGAGAAATTCTATGGTGGGA +
Preference number: 4 (lower is better)
Translates to: GLWNLHQWLAGGSQAFDHLPSPA*RNSMVG
Trigger: TCCCACCATAGAATTTCTGCAAGCTGGGGAAGGGAG...GTGGTCAAAGGCCTGAGAGCCACCAGCAAGCCACTGGTGCAAGTTCCAGAGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507677.5
CDS-3UTR CCA 90 bp CTGAAGCAGACTCCCATGAGAACTCTGCAGGGTTTCCTTCTCCCAGTTGAGGAAGACGTTCAGTGGATCTaGAGCGGGTGGTGGTCCGCT +
Preference number: 4 (lower is better)
Translates to: LKQTPMRTLQGFLLPVEEDVQWI*SGWWSA
Trigger: AGCGGACCACCACCCGCTCCAGATCCACTGAACGTC...TTCCTCAACTGGGAGAAGGAAACCCTGCAGAGTTCTCATGGGAGTCTGCTTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507740.5
CDS-3UTR TCA 90 bp GTTCTTTTAACAACTTTACCTGGGTCCATCAGAATGTCAAGACACAGTCTTGGTGGTGCCACGGGACCCTaGGGCTCTGGCCCCTGCCTC +
Preference number: 4 (lower is better)
Translates to: VLLTTLPGSIRMSRHSLGGATGP*GSGPCL
Trigger: GAGGCAGGGGCCAGAGCCTCAGGGTCCCGTGGCACC...ACCAAGACTGTGTCTTGACATTCTGATGGACCCAGGTAAAGTTGTTAAAAGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339750.3
CDS-3UTR TCA 90 bp TGGAACAAAGCGGGTGAAGAAGGTGGGATAACCTTGCTTGCTAAGTTTTCTGGCGGCAGGGGAATCGCTTaGACCCAGGAGGCGGAGGTT +
Preference number: 4 (lower is better)
Translates to: WNKAGEEGGITLLAKFSGGRGIA*TQEAEV
Trigger: AACCTCCGCCTCCTGGGTTCAAGCGATTCCCCTGCC...GCCAGAAAACTTAGCAAGCAAGGTTATCCCACCTTCTTCACCCGCTTTGTTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507677.5
CDS-3UTR TCA 90 bp CCTCTCACCCATTCATATCCACACGTAGAAGCTAGTCTCCGGACAGGTTGTTACATGCCCACAGAACCCTaGGGGCATCACGAGCTGAGG +
Preference number: 4 (lower is better)
Translates to: PLTHSYPHVEASLRTGCYMPTEP*GHHELR
Trigger: CCTCAGCTCGTGATGCCCTCAGGGTTCTGTGGGCAT...GTAACAACCTGTCCGGAGACTAGCTTCTACGTGTGGATATGAATGGGTGAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507740.5
CDS-3UTR GCA 90 bp GTTCTTTTAACAACTTTACCTGGGTCCATCAGAATGTCAAGACACAGTCTTGGTCGGCTCTGGGAGCGCTaGATGGAGCGCCCCGCAGCG +
Preference number: 4 (lower is better)
Translates to: VLLTTLPGSIRMSRHSLGRLWER*MERPAA
Trigger: CGCTGCGGGGCGCTCCATGCAGCGCTCCCAGAGCCG...ACCAAGACTGTGTCTTGACATTCTGATGGACCCAGGTAAAGTTGTTAAAAGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339750.3
CDS-3UTR GCA 90 bp CCAACACTAGGTTCTTTGGCCTTTGGACTCTGGAACTTGCACCAGTGGCTTGCTCTTGCACCAGTGGCTTaGTGGTGGCTCTCAGGCCTT +
Preference number: 4 (lower is better)
Translates to: PTLGSLAFGLWNLHQWLALAPVA*WWLSGL
Trigger: AAGGCCTGAGAGCCACCAGCAAGCCACTGGTGCAAG...AGCAAGCCACTGGTGCAAGTTCCAGAGTCCAAAGGCCAAAGAACCTAGTGTTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507677.5
CDS-3UTR CCA 90 bp CCTCTCACCCATTCATATCCACACGTAGAAGCTAGTCTCCGGACAGGTTGTTACTGGATCTGGAGCGGGTaGTGGTCCGCTCAAGGAGAG +
Preference number: 4 (lower is better)
Translates to: PLTHSYPHVEASLRTGCYWIWSG*WSAQGE
Trigger: CTCTCCTTGAGCGGACCACCACCCGCTCCAGATCCA...GTAACAACCTGTCCGGAGACTAGCTTCTACGTGTGGATATGAATGGGTGAGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507740.5
CDS-3UTR CCA 90 bp ATTACACTCCTCACCTGTAACACCGCTTCATGGCTGTATAGCTCCATTTCTGTGGGCCAGAAGCCAGGTTaGTGCCACGGGACCCTGAGG +
Preference number: 4 (lower is better)
Translates to: ITLLTCNTASWLYSSISVGQKPG*CHGTLR
Trigger: CCTCAGGGTCCCGTGGCACCAACCTGGCTTCTGGCC...CACAGAAATGGAGCTATACAGCCATGAAGCGGTGTTACAGGTGAGGAGTGTAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339750.3
CDS-3UTR CCA 90 bp GGACTCTGGAACTTGCACCAGTGGCTTGCTGGTGGCTCTCAGGCCTTTGACCACAGGTTCTTTGGCCTTTaGACTCTGGAACTTGCACCA +
Preference number: 4 (lower is better)
Translates to: GLWNLHQWLAGGSQAFDHRFFGL*TLELAP
Trigger: TGGTGCAAGTTCCAGAGTCCAAAGGCCAAAGAACCT...GTGGTCAAAGGCCTGAGAGCCACCAGCAAGCCACTGGTGCAAGTTCCAGAGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507677.5
CDS-3UTR CCA 90 bp GAACTCTGCAGGGTTTCCTTCTCCCAGTTGAGGAATCGCCCCAGAAGGATATGGTGGAGCCTTGGCATCTaGGGTCCCTGGGAAAGTGAA +
Preference number: 4 (lower is better)
Translates to: ELCRVSFSQLRNRPRRIWWSLGI*GPWESE
Trigger: TTCACTTTCCCAGGGACCCCAGATGCCAAGGCTCCA...CCATATCCTTCTGGGGCGATTCCTCAACTGGGAGAAGGAAACCCTGCAGAGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507740.5
CDS-3UTR TCA 90 bp ATTACACTCCTCACCTGTAACACCGCTTCATGGCTGTATAGCTCCATTTCTGTGGGCCACGGGCCCGGATaGTTTCTACCTCCAGCTGTC +
Preference number: 4 (lower is better)
Translates to: ITLLTCNTASWLYSSISVGHGPG*FLPPAV
Trigger: GACAGCTGGAGGTAGAAATCATCCGGGCCCGTGGCC...CACAGAAATGGAGCTATACAGCCATGAAGCGGTGTTACAGGTGAGGAGTGTAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR TCA 90 bp GGACTCTGGAACTTGCACCAGTGGCTTGCTGGTGGCTCTCAGGCCTTTGACCACGTTGCCAGAGGAGACTaGCATTTGAATATGTGGACT +
Preference number: 4 (lower is better)
Translates to: GLWNLHQWLAGGSQAFDHVARGD*HLNMWT
Trigger: AGTCCACATATTCAAATGTCAGTCTCCTCTGGCAAC...GTGGTCAAAGGCCTGAGAGCCACCAGCAAGCCACTGGTGCAAGTTCCAGAGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507677.5
CDS-3UTR GCA 90 bp ATTACACTCCTCACCTGTAACACCGCTTCATGGCTGTATAGCTCCATTTCTGTGCAGAAGCCAGGTTGGTaGCACGGGACCCTGAGGCTC +
Preference number: 4 (lower is better)
Translates to: ITLLTCNTASWLYSSISVQKPGW*HGTLRL
Trigger: GAGCCTCAGGGTCCCGTGGCACCAACCTGGCTTCTG...CACAGAAATGGAGCTATACAGCCATGAAGCGGTGTTACAGGTGAGGAGTGTAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339750.3
CDS-3UTR CCA 90 bp ATTACACTCCTCACCTGTAACACCGCTTCATGGCTGTATAGCTCCATTTCTGTGATCTGGAGCGGGTGGTaGTCCGCTCAAGGAGAGGCC +
Preference number: 4 (lower is better)
Translates to: ITLLTCNTASWLYSSISVIWSGW*SAQGEA
Trigger: GGCCTCTCCTTGAGCGGACCACCACCCGCTCCAGAT...CACAGAAATGGAGCTATACAGCCATGAAGCGGTGTTACAGGTGAGGAGTGTAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CCA 90 bp CACAGAACCCTGAGGGCATCACGAGCTGAGGGAGTTGAGACAAACACATTGAGCCTTGATGGGCTTGTCTaGACAGACCCAGTACGAGGA +
Preference number: 4 (lower is better)
Translates to: HRTLRASRAEGVETNTLSLDGLV*TDPVRG
Trigger: TCCTCGTACTGGGTCTGTCCAGACAAGCCCATCAAG...GCTCAATGTGTTTGTCTCAACTCCCTCAGCTCGTGATGCCCTCAGGGTTCTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507740.5
CDS-3UTR CCA 90 bp ACTGGAATTCCCTTTACTTTTCAAACATACTATGTACAGGGCAACAACGGTCACTCTGGGAGCGCTGCATaGAGCGCCCCGCAGCGCTGG +
Preference number: 4 (lower is better)
Translates to: TGIPFTFQTYYVQGNNGHSGSAA*SAPQRW
Trigger: CCAGCGCTGCGGGGCGCTCCATGCAGCGCTCCCAGA...GTGACCGTTGTTGCCCTGTACATAGTATGTTTGAAAAGTAAAGGGAATTCCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339750.3
CDS-3UTR CCA 90 bp CCTCTCACCCATTCATATCCACACGTAGAAGCTAGTCTCCGGACAGGTTGTTACTTGCCTATGGAGCCTTaGCATCTGGGGTCCCTGGGA +
Preference number: 4 (lower is better)
Translates to: PLTHSYPHVEASLRTGCYLPMEP*HLGSLG
Trigger: TCCCAGGGACCCCAGATGCCAAGGCTCCATAGGCAA...GTAACAACCTGTCCGGAGACTAGCTTCTACGTGTGGATATGAATGGGTGAGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507740.5
CDS-3UTR TCA 90 bp CTGAAGCAGACTCCCATGAGAACTCTGCAGGGTTTCCTTCTCCCAGTTGAGGAAGCCAAGCATTGCTCCTaGATCTCGAGGTACACTTCC +
Preference number: 4 (lower is better)
Translates to: LKQTPMRTLQGFLLPVEEAKHCS*ISRYTS
Trigger: GGAAGTGTACCTCGAGATTCAGGAGCAATGCTTGGC...TTCCTCAACTGGGAGAAGGAAACCCTGCAGAGTTCTCATGGGAGTCTGCTTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507740.5
CDS-3UTR TCA 90 bp CTGAAGCAGACTCCCATGAGAACTCTGCAGGGTTTCCTTCTCCCAGTTGAGGAATGCGACTGGAGTACTTaGTGGGCTTGTCTGGACAGA +
Preference number: 4 (lower is better)
Translates to: LKQTPMRTLQGFLLPVEECDWST*WACLDR
Trigger: TCTGTCCAGACAAGCCCATCAAGTACTCCAGTCGCA...TTCCTCAACTGGGAGAAGGAAACCCTGCAGAGTTCTCATGGGAGTCTGCTTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507740.5
CDS-3UTR TCA 90 bp CACAGAACCCTGAGGGCATCACGAGCTGAGGGAGTTGAGACAAACACATTGAGCAGCAGAGCCTGTGCCTaGGTATTTGTGACTATGCTG +
Preference number: 4 (lower is better)
Translates to: HRTLRASRAEGVETNTLSSRACA*VFVTML
Trigger: CAGCATAGTCACAAATACTCAGGCACAGGCTCTGCT...GCTCAATGTGTTTGTCTCAACTCCCTCAGCTCGTGATGCCCTCAGGGTTCTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507740.5
CDS-3UTR TCA 90 bp CACAGAACCCTGAGGGCATCACGAGCTGAGGGAGTTGAGACAAACACATTGAGCGAAAGAGCTCATTCGTaGGCTGGGAGTTGCAAGAAG +
Preference number: 4 (lower is better)
Translates to: HRTLRASRAEGVETNTLSERAHS*AGSCKK
Trigger: CTTCTTGCAACTCCCAGCTCACGAATGAGCTCTTTC...GCTCAATGTGTTTGTCTCAACTCCCTCAGCTCGTGATGCCCTCAGGGTTCTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507740.5
CDS-3UTR GCA 90 bp GAACTCTGCAGGGTTTCCTTCTCCCAGTTGAGGAATCGCCCCAGAAGGATATGGTGGAGCTACAAAGTCTaGCACTCTTCCTGCTGGACT +
Preference number: 4 (lower is better)
Translates to: ELCRVSFSQLRNRPRRIWWSYKV*HSSCWT
Trigger: AGTCCAGCAGGAAGAGTGGCAGACTTTGTAGCTCCA...CCATATCCTTCTGGGGCGATTCCTCAACTGGGAGAAGGAAACCCTGCAGAGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507740.5
CDS-3UTR CCA 90 bp CACAGAACCCTGAGGGCATCACGAGCTGAGGGAGTTGAGACAAACACATTGAGCGGGGTAGGAGGACTATaGTTTGTGGTCCTTTGTGCA +
Preference number: 4 (lower is better)
Translates to: HRTLRASRAEGVETNTLSGVGGL*FVVLCA
Trigger: TGCACAAAGGACCACAAACCATAGTCCTCCTACCCC...GCTCAATGTGTTTGTCTCAACTCCCTCAGCTCGTGATGCCCTCAGGGTTCTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507740.5
CDS-3UTR CCA 90 bp GAACTCTGCAGGGTTTCCTTCTCCCAGTTGAGGAATCGCCCCAGAAGGATATGGAGTCTGGTCTATCTATaGGTAGTGGACTCCTCCTGG +
Preference number: 4 (lower is better)
Translates to: ELCRVSFSQLRNRPRRIWSLVYL*VVDSSW
Trigger: CCAGGAGGAGTCCACTACCCATAGATAGACCAGACT...CCATATCCTTCTGGGGCGATTCCTCAACTGGGAGAAGGAAACCCTGCAGAGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507740.5
CDS-3UTR CCA 90 bp CCTCTCACCCATTCATATCCACACGTAGAAGCTAGTCTCCGGACAGGTTGTTACTTGCAACCTCCGTGTTaGGCTCTCTCCATGGAGCTG +
Preference number: 4 (lower is better)
Translates to: PLTHSYPHVEASLRTGCYLQPPC*ALSMEL
Trigger: CAGCTCCATGGAGAGAGCCCAACACGGAGGTTGCAA...GTAACAACCTGTCCGGAGACTAGCTTCTACGTGTGGATATGAATGGGTGAGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507740.5
CDS-3UTR CCA 90 bp ATTACACTCCTCACCTGTAACACCGCTTCATGGCTGTATAGCTCCATTTCTGTGGACGTTCAGTGGATCTaGAGCGGGTGGTGGTCCGCT +
Preference number: 4 (lower is better)
Translates to: ITLLTCNTASWLYSSISVDVQWI*SGWWSA
Trigger: AGCGGACCACCACCCGCTCCAGATCCACTGAACGTC...CACAGAAATGGAGCTATACAGCCATGAAGCGGTGTTACAGGTGAGGAGTGTAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CCA 90 bp ATTACACTCCTCACCTGTAACACCGCTTCATGGCTGTATAGCTCCATTTCTGTGGAGACGTGGCTTTCCTaGCCGCCGGGACCTCCAATT +
Preference number: 4 (lower is better)
Translates to: ITLLTCNTASWLYSSISVETWLS*PPGPPI
Trigger: AATTGGAGGTCCCGGCGGCCAGGAAAGCCACGTCTC...CACAGAAATGGAGCTATACAGCCATGAAGCGGTGTTACAGGTGAGGAGTGTAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339750.3
CDS-3UTR CCA 90 bp GTTCTTTTAACAACTTTACCTGGGTCCATCAGAATGTCAAGACACAGTCTTGGTAGCCCGGAGGAGACGTaGCTTTCCTGGCCGCCGGGA +
Preference number: 4 (lower is better)
Translates to: VLLTTLPGSIRMSRHSLGSPEET*LSWPPG
Trigger: TCCCGGCGGCCAGGAAAGCCACGTCTCCTCCGGGCT...ACCAAGACTGTGTCTTGACATTCTGATGGACCCAGGTAAAGTTGTTAAAAGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339750.3
CDS-3UTR CCA 90 bp TCCCAACTGGAATTCCCTTTACTTTTCAAACATACTATGTACAGGGCAACAACGAGATACGCGGCGTCTTaGCGGCTGGGGCGCAGCGTC +
Preference number: 4 (lower is better)
Translates to: SQLEFPLLFKHTMYRATTRYAAS*RLGRSV
Trigger: GACGCTGCGCCCCAGCCGCCAAGACGCCGCGTATCT...CGTTGTTGCCCTGTACATAGTATGTTTGAAAAGTAAAGGGAATTCCAGTTGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339750.3
CDS-3UTR TCA 90 bp CACAGAACCCTGAGGGCATCACGAGCTGAGGGAGTTGAGACAAACACATTGAGCTCTTTGGAATGCCTATaGCTTCTCCTGTTGGAGTCC +
Preference number: 4 (lower is better)
Translates to: HRTLRASRAEGVETNTLSSLECL*LLLLES
Trigger: GGACTCCAACAGGAGAAGTCATAGGCATTCCAAAGA...GCTCAATGTGTTTGTCTCAACTCCCTCAGCTCGTGATGCCCTCAGGGTTCTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507740.5
CDS-3UTR TCA 90 bp CTTTTCAAACATACTATGTACAGGGCAACAACGGTCACTGGCATAGTGCTAGTTGGCCACGGGCCCGGATaGTTTCTACCTCCAGCTGTC +
Preference number: 4 (lower is better)
Translates to: LFKHTMYRATTVTGIVLVGHGPG*FLPPAV
Trigger: GACAGCTGGAGGTAGAAATCATCCGGGCCCGTGGCC...AACTAGCACTATGCCAGTGACCGTTGTTGCCCTGTACATAGTATGTTTGAAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR GCA 90 bp ATTACACTCCTCACCTGTAACACCGCTTCATGGCTGTATAGCTCCATTTCTGTGACCCATTGCAGGTGTTaGCAGAGTCTGGCGTCCCAC +
Preference number: 4 (lower is better)
Translates to: ITLLTCNTASWLYSSISVTHCRC*QSLASH
Trigger: GTGGGACGCCAGACTCTGGCAACACCTGCAATGGGT...CACAGAAATGGAGCTATACAGCCATGAAGCGGTGTTACAGGTGAGGAGTGTAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR GCA 90 bp ATTACACTCCTCACCTGTAACACCGCTTCATGGCTGTATAGCTCCATTTCTGTGCCTCCAGGGAGTTCATaGAGGGAAAGTAGCCGGCCA +
Preference number: 4 (lower is better)
Translates to: ITLLTCNTASWLYSSISVPPGSS*RESSRP
Trigger: TGGCCGGCTACTTTCCCTGCATGAACTCCCTGGAGG...CACAGAAATGGAGCTATACAGCCATGAAGCGGTGTTACAGGTGAGGAGTGTAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339750.3
CDS-3UTR GCA 90 bp GAACTCTGCAGGGTTTCCTTCTCCCAGTTGAGGAATCGCCCCAGAAGGATATGGTTGGGGATGCCTCACTaGTATGCCAAGACGTATGAT +
Preference number: 4 (lower is better)
Translates to: ELCRVSFSQLRNRPRRIWLGMPH*YAKTYD
Trigger: ATCATACGTCTTGGCATAGCAGTGAGGCATCCCCAA...CCATATCCTTCTGGGGCGATTCCTCAACTGGGAGAAGGAAACCCTGCAGAGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507740.5
CDS-3UTR GCA 90 bp CTGAAGCAGACTCCCATGAGAACTCTGCAGGGTTTCCTTCTCCCAGTTGAGGAAGGCGTTTTAAAGAAATaGTCTACTGAGGGCCGCTGC +
Preference number: 4 (lower is better)
Translates to: LKQTPMRTLQGFLLPVEEGVLKK*STEGRC
Trigger: GCAGCGGCCCTCAGTAGAGCATTTCTTTAAAACGCC...TTCCTCAACTGGGAGAAGGAAACCCTGCAGAGTTCTCATGGGAGTCTGCTTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507740.5
CDS-3UTR CCA 90 bp CCTGTCCTGTCAGCTTCCCTGGTTTTAAGCCTTTCAAAATGGACTCACACTTGGTTGCAACCTCCGTGTTaGGCTCTCTCCATGGAGCTG +
Preference number: 4 (lower is better)
Translates to: PVLSASLVLSLSKWTHTWLQPPC*ALSMEL
Trigger: CAGCTCCATGGAGAGAGCCCAACACGGAGGTTGCAA...CCAAGTGTGAGTCCATTTTGAAAGGCTTAAAACCAGGGAAGCTGACAGGACAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507677.5
CDS-3UTR CCA 90 bp CTTTTCAAACATACTATGTACAGGGCAACAACGGTCACTGGCATAGTGCTAGTTCCTGCCGGCCCATCTTaGACGAGGACCCGCTTTTCC +
Preference number: 4 (lower is better)
Translates to: LFKHTMYRATTVTGIVLVPAGPS*TRTRFS
Trigger: GGAAAAGCGGGTCCTCGTCCAAGATGGGCCGGCAGG...AACTAGCACTATGCCAGTGACCGTTGTTGCCCTGTACATAGTATGTTTGAAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339750.3
CDS-3UTR CCA 90 bp TCCCAACTGGAATTCCCTTTACTTTTCAAACATACTATGTACAGGGCAACAACGAGGCTACTCCGGCTCTaGGAGCGCTGCATGGAGCGC +
Preference number: 4 (lower is better)
Translates to: SQLEFPLLFKHTMYRATTRLLRL*ERCMER
Trigger: GCGCTCCATGCAGCGCTCCCAGAGCCGGAGTAGCCT...CGTTGTTGCCCTGTACATAGTATGTTTGAAAAGTAAAGGGAATTCCAGTTGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339750.3
CDS-3UTR CCA 90 bp CCAACACTAGGTTCTTTGGCCTTTGGACTCTGGAACTTGCACCAGTGGCTTGCTTTGGCCTTTGGACTCTaGAACTTGCACCAGTGGCTT +
Preference number: 4 (lower is better)
Translates to: PTLGSLAFGLWNLHQWLALAFGL*NLHQWL
Trigger: AAGCCACTGGTGCAAGTTCCAGAGTCCAAAGGCCAA...AGCAAGCCACTGGTGCAAGTTCCAGAGTCCAAAGGCCAAAGAACCTAGTGTTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507677.5
CDS-3UTR CCA 90 bp ATTACACTCCTCACCTGTAACACCGCTTCATGGCTGTATAGCTCCATTTCTGTGAGCCGACATGTTTGGTaGAGCCGAACCACCCTAGGG +
Preference number: 4 (lower is better)
Translates to: ITLLTCNTASWLYSSISVSRHVW*SRTTLG
Trigger: CCCTAGGGTGGTTCGGCTCCACCAAACATGTCGGCT...CACAGAAATGGAGCTATACAGCCATGAAGCGGTGTTACAGGTGAGGAGTGTAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000666250.1
ENST00000668113.1
CDS-3UTR TCA 90 bp CTGAAGCAGACTCCCATGAGAACTCTGCAGGGTTTCCTTCTCCCAGTTGAGGAAAGCCAATTCCTCCTCTaGACTGCTCAACGAAATCTG +
Preference number: 4 (lower is better)
Translates to: LKQTPMRTLQGFLLPVEESQFLL*TAQRNL
Trigger: CAGATTTCGTTGAGCAGTTCAGAGGAGGAATTGGCT...TTCCTCAACTGGGAGAAGGAAACCCTGCAGAGTTCTCATGGGAGTCTGCTTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507740.5
CDS-3UTR TCA 90 bp ACTGGAATTCCCTTTACTTTTCAAACATACTATGTACAGGGCAACAACGGTCACGGCCACGGGCCCGGATaGTTTCTACCTCCAGCTGTC +
Preference number: 4 (lower is better)
Translates to: TGIPFTFQTYYVQGNNGHGHGPG*FLPPAV
Trigger: GACAGCTGGAGGTAGAAATCATCCGGGCCCGTGGCC...GTGACCGTTGTTGCCCTGTACATAGTATGTTTGAAAAGTAAAGGGAATTCCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR TCA 90 bp TGCTGGATGATTCCTTTCACTCTTCCTGCCCTTGGACATCCAACACTAGGTTCTCCCTCTGGAGAACACTaGCTAATACAGCCACCCTAC +
Preference number: 4 (lower is better)
Translates to: CWMIPFTLPALGHPTLGSPSGEH*LIQPPY
Trigger: GTAGGGTGGCTGTATTAGTCAGTGTTCTCCAGAGGG...AGAACCTAGTGTTGGATGTCCAAGGGCAGGAAGAGTGAAAGGAATCATCCAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507677.5
CDS-3UTR TCA 90 bp CCTCTCACCCATTCATATCCACACGTAGAAGCTAGTCTCCGGACAGGTTGTTACAAAGAAATGCTCTACTaGGGGCCGCTGCTAAGACCA +
Preference number: 4 (lower is better)
Translates to: PLTHSYPHVEASLRTGCYKEMLY*GPLLRP
Trigger: TGGTCTTAGCAGCGGCCCTCAGTAGAGCATTTCTTT...GTAACAACCTGTCCGGAGACTAGCTTCTACGTGTGGATATGAATGGGTGAGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507740.5
CDS-3UTR TCA 90 bp GAACTCTGCAGGGTTTCCTTCTCCCAGTTGAGGAATCGCCCCAGAAGGATATGGGAATTGGACTCGAGTTaGGTCTTTGGAAATGGAGGA +
Preference number: 4 (lower is better)
Translates to: ELCRVSFSQLRNRPRRIWELDSS*VFGNGG
Trigger: TCCTCCATTTCCAAAGACTCAACTCGAGTCCAATTC...CCATATCCTTCTGGGGCGATTCCTCAACTGGGAGAAGGAAACCCTGCAGAGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507740.5
CDS-3UTR GCA 90 bp CACAGAACCCTGAGGGCATCACGAGCTGAGGGAGTTGAGACAAACACATTGAGCTGGAGATCTAGGCATTaGGGTATCCGAAGTAGCATA +
Preference number: 4 (lower is better)
Translates to: HRTLRASRAEGVETNTLSWRSRH*GIRSSI
Trigger: TATGCTACTTCGGATACCGCAATGCCTAGATCTCCA...GCTCAATGTGTTTGTCTCAACTCCCTCAGCTCGTGATGCCCTCAGGGTTCTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507740.5
CDS-3UTR GCA 90 bp ATTACACTCCTCACCTGTAACACCGCTTCATGGCTGTATAGCTCCATTTCTGTGCCTTCTCTCATGCCGTaGTCGGGACACTTCAGCATG +
Preference number: 4 (lower is better)
Translates to: ITLLTCNTASWLYSSISVPSLMP*SGHFSM
Trigger: CATGCTGAAGTGTCCCGAGCACGGCATGAGAGAAGG...CACAGAAATGGAGCTATACAGCCATGAAGCGGTGTTACAGGTGAGGAGTGTAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR GCA 90 bp AGAAACAGGCTCAGAAGACACAACATTAAGCATGCAGTGTTACCAGGGTTTGCAACCCATTGCAGGTGTTaGCAGAGTCTGGCGTCCCAC +
Preference number: 4 (lower is better)
Translates to: RNRLRRHNIKHAVLPGFATHCRC*QSLASH
Trigger: GTGGGACGCCAGACTCTGGCAACACCTGCAATGGGT...TGCAAACCCTGGTAACACTGCATGCTTAATGTTGTGTCTTCTGAGCCTGTTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR GCA 90 bp CACAGAACCCTGAGGGCATCACGAGCTGAGGGAGTTGAGACAAACACATTGAGCAAGATTTGTGATCCATaGGGCCATAATCTCCCCAGA +
Preference number: 4 (lower is better)
Translates to: HRTLRASRAEGVETNTLSKICDP*GHNLPR
Trigger: TCTGGGGAGATTATGGCCGCATGGATCACAAATCTT...GCTCAATGTGTTTGTCTCAACTCCCTCAGCTCGTGATGCCCTCAGGGTTCTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507740.5
CDS-3UTR GCA 90 bp TCCCAACTGGAATTCCCTTTACTTTTCAAACATACTATGTACAGGGCAACAACGGCCCAAGGTGCCCACTaGAGTGTCAGACTGGCTGCC +
Preference number: 4 (lower is better)
Translates to: SQLEFPLLFKHTMYRATTAQGAH*SVRLAA
Trigger: GGCAGCCAGTCTGACACTGCAGTGGGCACCTTGGGC...CGTTGTTGCCCTGTACATAGTATGTTTGAAAAGTAAAGGGAATTCCAGTTGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000666250.1
CDS-3UTR GCA 90 bp TGCTGGATGATTCCTTTCACTCTTCCTGCCCTTGGACATCCAACACTAGGTTCTTTGGACTCTGGAACTTaGACCAGTGGCTTGCTGGTG +
Preference number: 4 (lower is better)
Translates to: CWMIPFTLPALGHPTLGSLDSGT*TSGLLV
Trigger: CACCAGCAAGCCACTGGTGCAAGTTCCAGAGTCCAA...AGAACCTAGTGTTGGATGTCCAAGGGCAGGAAGAGTGAAAGGAATCATCCAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507677.5
CDS-3UTR GCA 90 bp CTGAAGCAGACTCCCATGAGAACTCTGCAGGGTTTCCTTCTCCCAGTTGAGGAAGGTTTAGTCAGGAGTTaGCGAAAGAGCTCATTCGTG +
Preference number: 4 (lower is better)
Translates to: LKQTPMRTLQGFLLPVEEGLVRS*RKSSFV
Trigger: CACGAATGAGCTCTTTCGGCAACTCCTGACTAAACC...TTCCTCAACTGGGAGAAGGAAACCCTGCAGAGTTCTCATGGGAGTCTGCTTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507740.5
CDS-3UTR CCA 90 bp CACAGAACCCTGAGGGCATCACGAGCTGAGGGAGTTGAGACAAACACATTGAGCACACTTCCTCAAATGTaGCTCCTTGCAGTAGTCTTC +
Preference number: 4 (lower is better)
Translates to: HRTLRASRAEGVETNTLSTLPQM*LLAVVF
Trigger: GAAGACTACTGCAAGGAGCCACATTTGAGGAAGTGT...GCTCAATGTGTTTGTCTCAACTCCCTCAGCTCGTGATGCCCTCAGGGTTCTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507740.5
CDS-3UTR CCA 90 bp ATTACACTCCTCACCTGTAACACCGCTTCATGGCTGTATAGCTCCATTTCTGTGTTGCAACCTCCGTGTTaGGCTCTCTCCATGGAGCTG +
Preference number: 4 (lower is better)
Translates to: ITLLTCNTASWLYSSISVLQPPC*ALSMEL
Trigger: CAGCTCCATGGAGAGAGCCCAACACGGAGGTTGCAA...CACAGAAATGGAGCTATACAGCCATGAAGCGGTGTTACAGGTGAGGAGTGTAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CCA 90 bp TCCCAACTGGAATTCCCTTTACTTTTCAAACATACTATGTACAGGGCAACAACGATCTGGAGCGGGTGGTaGTCCGCTCAAGGAGAGGCC +
Preference number: 4 (lower is better)
Translates to: SQLEFPLLFKHTMYRATTIWSGW*SAQGEA
Trigger: GGCCTCTCCTTGAGCGGACCACCACCCGCTCCAGAT...CGTTGTTGCCCTGTACATAGTATGTTTGAAAAGTAAAGGGAATTCCAGTTGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CCA 90 bp GTTCTTTTAACAACTTTACCTGGGTCCATCAGAATGTCAAGACACAGTCTTGGTATCTGGAGCGGGTGGTaGTCCGCTCAAGGAGAGGCC +
Preference number: 4 (lower is better)
Translates to: VLLTTLPGSIRMSRHSLGIWSGW*SAQGEA
Trigger: GGCCTCTCCTTGAGCGGACCACCACCCGCTCCAGAT...ACCAAGACTGTGTCTTGACATTCTGATGGACCCAGGTAAAGTTGTTAAAAGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CCA 90 bp AGAAACAGGCTCAGAAGACACAACATTAAGCATGCAGTGTTACCAGGGTTTGCACTTTGGTGGAAGCTGTaGAAGCTGTCGGCCCCTTCG +
Preference number: 4 (lower is better)
Translates to: RNRLRRHNIKHAVLPGFALWWKL*KLSAPS
Trigger: CGAAGGGGCCGACAGCTTCCACAGCTTCCACCAAAG...TGCAAACCCTGGTAACACTGCATGCTTAATGTTGTGTCTTCTGAGCCTGTTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CCA 90 bp GAACTCTGCAGGGTTTCCTTCTCCCAGTTGAGGAATCGCCCCAGAAGGATATGGGCTCTGAATCAAACATaGGGTATGAGAGAGGATCAG +
Preference number: 4 (lower is better)
Translates to: ELCRVSFSQLRNRPRRIWALNQT*GMREDQ
Trigger: CTGATCCTCTCTCATACCCCATGTTTGATTCAGAGC...CCATATCCTTCTGGGGCGATTCCTCAACTGGGAGAAGGAAACCCTGCAGAGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507740.5
CDS-3UTR CCA 90 bp CTGAAGCAGACTCCCATGAGAACTCTGCAGGGTTTCCTTCTCCCAGTTGAGGAAGGCAACAACGGTCACTaGCATAGTGCTAGTTACATG +
Preference number: 4 (lower is better)
Translates to: LKQTPMRTLQGFLLPVEEGNNGH*HSASYM
Trigger: CATGTAACTAGCACTATGCCAGTGACCGTTGTTGCC...TTCCTCAACTGGGAGAAGGAAACCCTGCAGAGTTCTCATGGGAGTCTGCTTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507740.5
CDS-3UTR CCA 90 bp CCTCTCACCCATTCATATCCACACGTAGAAGCTAGTCTCCGGACAGGTTGTTACAGGGTGCAAAGACATTaGGGATGCCTCACTGCTATG +
Preference number: 4 (lower is better)
Translates to: PLTHSYPHVEASLRTGCYRVQRH*GCLTAM
Trigger: CATAGCAGTGAGGCATCCCCAATGTCTTTGCACCCT...GTAACAACCTGTCCGGAGACTAGCTTCTACGTGTGGATATGAATGGGTGAGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507740.5
CDS-3UTR CCA 90 bp GGTTTAGTCAGGAGTTGCCGAAAGAGCTCATTCGTGAGCTGGGAGTTGCAAGAACGCCCCAGAAGGATATaGAGAAATCCTCTCACCCAT +
Preference number: 4 (lower is better)
Translates to: GLVRSCRKSSFVSWELQERPRRI*RNPLTH
Trigger: ATGGGTGAGAGGATTTCTCCATATCCTTCTGGGGCG...TTCTTGCAACTCCCAGCTCACGAATGAGCTCTTTCGGCAACTCCTGACTAAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507740.5
CDS-3UTR CCA 90 bp CCTCTCACCCATTCATATCCACACGTAGAAGCTAGTCTCCGGACAGGTTGTTACAGCTCATTCGTGAGCTaGGAGTTGCAAGAAGGGACT +
Preference number: 4 (lower is better)
Translates to: PLTHSYPHVEASLRTGCYSSFVS*ELQEGT
Trigger: AGTCCCTTCTTGCAACTCCCAGCTCACGAATGAGCT...GTAACAACCTGTCCGGAGACTAGCTTCTACGTGTGGATATGAATGGGTGAGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507740.5
3UTR CAA 72 bp TCAATGGCAGCCATGTTGTTAGGGTTTAGTCAGGAGTaGCCGAAAGAGCTCATTCGTGAGCTGGGAGTTGCA +
Preference number: 4 (lower is better)
Translates to: SMAAMLLGFSQE*PKELIRELGVA
Trigger: TGCAACTCCCAGCTCACGAATGAGCTCTTTCGGCAACTCCTGACTAAACCCTAACAACATGGCTGCCATTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507740.5
3UTR CAA 72 bp ATCATACCCACTACAGGACCATCATATCCTTTATTGTaGCCTATGGAGCCTTGGCATCTGGGGTCCCTGGGA +
Preference number: 4 (lower is better)
Translates to: IIPTTGPSYPLL*PMEPWHLGSLG
Trigger: TCCCAGGGACCCCAGATGCCAAGGCTCCATAGGCAACAATAAAGGATATGATGGTCCTGTAGTGGGTATGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507740.5
CDS-3UTR TCA 90 bp TGCTGGATGATTCCTTTCACTCTTCCTGCCCTTGGACATCCAACACTAGGTTCTTGCACAAAGCCGACCTaGTTCAGTCATCTTTCCTCC +
Preference number: 4 (lower is better)
Translates to: CWMIPFTLPALGHPTLGSCTKPT*FSHLSS
Trigger: GGAGGAAAGATGACTGAATCAGGTCGGCTTTGTGCA...AGAACCTAGTGTTGGATGTCCAAGGGCAGGAAGAGTGAAAGGAATCATCCAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507677.5
CDS-3UTR TCA 90 bp GGTTTAGTCAGGAGTTGCCGAAAGAGCTCATTCGTGAGCTGGGAGTTGCAAGAAGAGACATCATGCGTCTaGAGTTTGTACCAATGTGGC +
Preference number: 4 (lower is better)
Translates to: GLVRSCRKSSFVSWELQEETSCV*SLYQCG
Trigger: GCCACATTGGTACAAACTTCAGACGCATGATGTCTC...TTCTTGCAACTCCCAGCTCACGAATGAGCTCTTTCGGCAACTCCTGACTAAACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507740.5
CDS-3UTR TCA 90 bp CTGAAGCAGACTCCCATGAGAACTCTGCAGGGTTTCCTTCTCCCAGTTGAGGAAATAACATCTACTCGATaGGGAGACCCTGATGGTGAA +
Preference number: 4 (lower is better)
Translates to: LKQTPMRTLQGFLLPVEEITSTR*GDPDGE
Trigger: TTCACCATCAGGGTCTCCTCATCGAGTAGATGTTAT...TTCCTCAACTGGGAGAAGGAAACCCTGCAGAGTTCTCATGGGAGTCTGCTTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507740.5
CDS-3UTR TCA 90 bp CCTCTCACCCATTCATATCCACACGTAGAAGCTAGTCTCCGGACAGGTTGTTACAGGCCGTTGTTCTGTTaGTCTGGATCTGTGATATGG +
Preference number: 4 (lower is better)
Translates to: PLTHSYPHVEASLRTGCYRPLFC*SGSVIW
Trigger: CCATATCACAGATCCAGATCAACAGAACAACGGCCT...GTAACAACCTGTCCGGAGACTAGCTTCTACGTGTGGATATGAATGGGTGAGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507740.5
CDS-3UTR TCA 90 bp CACAGAACCCTGAGGGCATCACGAGCTGAGGGAGTTGAGACAAACACATTGAGCATAGTGCTAGTTACATaGCTAAACCACAAGTCGAGG +
Preference number: 4 (lower is better)
Translates to: HRTLRASRAEGVETNTLSIVLVT*LNHKSR
Trigger: CCTCGACTTGTGGTTTAGTCATGTAACTAGCACTAT...GCTCAATGTGTTTGTCTCAACTCCCTCAGCTCGTGATGCCCTCAGGGTTCTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507740.5
CDS-3UTR TCA 90 bp ATTACACTCCTCACCTGTAACACCGCTTCATGGCTGTATAGCTCCATTTCTGTGTCCGTTTGGCTGAGCTaGGAAGCACTGCGACTTTTC +
Preference number: 4 (lower is better)
Translates to: ITLLTCNTASWLYSSISVSVWLS*EALRLF
Trigger: GAAAAGTCGCAGTGCTTCTCAGCTCAGCCAAACGGA...CACAGAAATGGAGCTATACAGCCATGAAGCGGTGTTACAGGTGAGGAGTGTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000666250.1
CDS-3UTR TCA 90 bp CCTGTCCTGTCAGCTTCCCTGGTTTTAAGCCTTTCAAAATGGACTCACACTTGGCTGGAACAAAGCGGGTaGAGAAGGTGGGATAACCTT +
Preference number: 4 (lower is better)
Translates to: PVLSASLVLSLSKWTHTWLEQSG*RRWDNL
Trigger: AAGGTTATCCCACCTTCTTCACCCGCTTTGTTCCAG...CCAAGTGTGAGTCCATTTTGAAAGGCTTAAAACCAGGGAAGCTGACAGGACAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507677.5
CDS-3UTR TCA 90 bp GAACTCTGCAGGGTTTCCTTCTCCCAGTTGAGGAATCGCCCCAGAAGGATATGGTCCATATTTTCCAGGTaGGGAAATGAAATCCTGGAG +
Preference number: 4 (lower is better)
Translates to: ELCRVSFSQLRNRPRRIWSIFSR*GNEILE
Trigger: CTCCAGGATTTCATTTCCTCACCTGGAAAATATGGA...CCATATCCTTCTGGGGCGATTCCTCAACTGGGAGAAGGAAACCCTGCAGAGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507740.5
CDS-3UTR GCA 90 bp GGTTTAGTCAGGAGTTGCCGAAAGAGCTCATTCGTGAGCTGGGAGTTGCAAGAAAAGATTCAGTACCCGTaGAGCTTTCGGCTTTCTCCT +
Preference number: 4 (lower is better)
Translates to: GLVRSCRKSSFVSWELQEKIQYP*SFRLSP
Trigger: AGGAGAAAGCCGAAAGCTGCACGGGTACTGAATCTT...TTCTTGCAACTCCCAGCTCACGAATGAGCTCTTTCGGCAACTCCTGACTAAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507740.5
CDS-3UTR GCA 90 bp AGAAACAGGCTCAGAAGACACAACATTAAGCATGCAGTGTTACCAGGGTTTGCACCTTCTCTCATGCCGTaGTCGGGACACTTCAGCATG +
Preference number: 4 (lower is better)
Translates to: RNRLRRHNIKHAVLPGFAPSLMP*SGHFSM
Trigger: CATGCTGAAGTGTCCCGAGCACGGCATGAGAGAAGG...TGCAAACCCTGGTAACACTGCATGCTTAATGTTGTGTCTTCTGAGCCTGTTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR GCA 90 bp ATTACACTCCTCACCTGTAACACCGCTTCATGGCTGTATAGCTCCATTTCTGTGCTATGCCTTCTCTCATaGCGTGCTCGGGACACTTCA +
Preference number: 4 (lower is better)
Translates to: ITLLTCNTASWLYSSISVLCLLS*RARDTS
Trigger: TGAAGTGTCCCGAGCACGGCATGAGAGAAGGCATAG...CACAGAAATGGAGCTATACAGCCATGAAGCGGTGTTACAGGTGAGGAGTGTAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR GCA 90 bp GGTTTAGTCAGGAGTTGCCGAAAGAGCTCATTCGTGAGCTGGGAGTTGCAAGAAATTCTCTTTGACCTTTaGAACCTCCGTGTTGGGCTC +
Preference number: 4 (lower is better)
Translates to: GLVRSCRKSSFVSWELQEILFDL*NLRVGL
Trigger: GAGCCCAACACGGAGGTTGCAAAGGTCAAAGAGAAT...TTCTTGCAACTCCCAGCTCACGAATGAGCTCTTTCGGCAACTCCTGACTAAACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507740.5
CDS-3UTR GCA 90 bp CTTTTCAAACATACTATGTACAGGGCAACAACGGTCACTGGCATAGTGCTAGTTGCTTTTTGCCACTGGTaGCCAAGGTGCCCACTGCAG +
Preference number: 4 (lower is better)
Translates to: LFKHTMYRATTVTGIVLVAFCHW*PRCPLQ
Trigger: CTGCAGTGGGCACCTTGGGCACCAGTGGCAAAAAGC...AACTAGCACTATGCCAGTGACCGTTGTTGCCCTGTACATAGTATGTTTGAAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000666250.1
CDS-3UTR CCA 90 bp ATATGGAGAAATCCTCTCACCCATTCATATCCACACGTAGAAGCTAGTCTCCGGGCCTCCCATCTTCCCTaGAAGGGAGATCTTTTGCTC +
Preference number: 4 (lower is better)
Translates to: IWRNPLTHSYPHVEASLRASHLP*KGDLLL
Trigger: GAGCAAAAGATCTCCCTTCCAGGGAAGATGGGAGGC...CCGGAGACTAGCTTCTACGTGTGGATATGAATGGGTGAGAGGATTTCTCCATAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507740.5
CDS-3UTR CCA 90 bp CCTGTCCTGTCAGCTTCCCTGGTTTTAAGCCTTTCAAAATGGACTCACACTTGGTCTTCGTGGCATATATaGAGAAGGGTGGGGAAGTGG +
Preference number: 4 (lower is better)
Translates to: PVLSASLVLSLSKWTHTWSSWHI*RRVGKW
Trigger: CCACTTCCCCACCCTTCTCCATATATGCCACGAAGA...CCAAGTGTGAGTCCATTTTGAAAGGCTTAAAACCAGGGAAGCTGACAGGACAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000507677.5
CDS-3UTR CCA 90 bp ACTGGAATTCCCTTTACTTTTCAAACATACTATGTACAGGGCAACAACGGTCACTGGATCTGGAGCGGGTaGTGGTCCGCTCAAGGAGAG +
Preference number: 4 (lower is better)
Translates to: TGIPFTFQTYYVQGNNGHWIWSG*WSAQGE
Trigger: CTCTCCTTGAGCGGACCACCACCCGCTCCAGATCCA...GTGACCGTTGTTGCCCTGTACATAGTATGTTTGAAAAGTAAAGGGAATTCCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CCA 90 bp GTTCTTTTAACAACTTTACCTGGGTCCATCAGAATGTCAAGACACAGTCTTGGTGACGTTCAGTGGATCTaGAGCGGGTGGTGGTCCGCT +
Preference number: 4 (lower is better)
Translates to: VLLTTLPGSIRMSRHSLGDVQWI*SGWWSA
Trigger: AGCGGACCACCACCCGCTCCAGATCCACTGAACGTC...ACCAAGACTGTGTCTTGACATTCTGATGGACCCAGGTAAAGTTGTTAAAAGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CCA 90 bp ATTACACTCCTCACCTGTAACACCGCTTCATGGCTGTATAGCTCCATTTCTGTGCTTGATGGGCTTGTCTaGACAGACCCAGTACGAGGA +
Preference number: 4 (lower is better)
Translates to: ITLLTCNTASWLYSSISVLDGLV*TDPVRG
Trigger: TCCTCGTACTGGGTCTGTCCAGACAAGCCCATCAAG...CACAGAAATGGAGCTATACAGCCATGAAGCGGTGTTACAGGTGAGGAGTGTAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CCA 90 bp ATTACACTCCTCACCTGTAACACCGCTTCATGGCTGTATAGCTCCATTTCTGTGCAACGTTCCCTTTGGTaGAAGCTGTGGAAGCTGTCG +
Preference number: 4 (lower is better)
Translates to: ITLLTCNTASWLYSSISVQRSLW*KLWKLS
Trigger: CGACAGCTTCCACAGCTTCCACCAAAGGGAACGTTG...CACAGAAATGGAGCTATACAGCCATGAAGCGGTGTTACAGGTGAGGAGTGTAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CCA 90 bp CCTCTCACCCATTCATATCCACACGTAGAAGCTAGTCTCCGGACAGGTTGTTACTTTTACATACGGTGCTaGCAGTGTCTTGGAACCTGG +
Preference number: 4 (lower is better)
Translates to: PLTHSYPHVEASLRTGCYFYIRC*QCLGTW
Trigger: CCAGGTTCCAAGACACTGCCAGCACCGTATGTAAAA...GTAACAACCTGTCCGGAGACTAGCTTCTACGTGTGGATATGAATGGGTGAGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507740.5
CDS-3UTR CCA 90 bp CCTCTCACCCATTCATATCCACACGTAGAAGCTAGTCTCCGGACAGGTTGTTACTCCATGGCTTCAGATTaGACCAGAACTCGAGTGTCA +
Preference number: 4 (lower is better)
Translates to: PLTHSYPHVEASLRTGCYSMASD*TRTRVS
Trigger: TGACACTCGAGTTCTGGTCCAATCTGAAGCCATGGA...GTAACAACCTGTCCGGAGACTAGCTTCTACGTGTGGATATGAATGGGTGAGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507740.5
CDS-3UTR CCA 90 bp GTTCTTTTAACAACTTTACCTGGGTCCATCAGAATGTCAAGACACAGTCTTGGTGCCGCTTTTTGCCACTaGTGCCCAAGGTGCCCACTG +
Preference number: 4 (lower is better)
Translates to: VLLTTLPGSIRMSRHSLGAAFCH*CPRCPL
Trigger: CAGTGGGCACCTTGGGCACCAGTGGCAAAAAGCGGC...ACCAAGACTGTGTCTTGACATTCTGATGGACCCAGGTAAAGTTGTTAAAAGAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000666250.1
CDS-3UTR CCA 90 bp CCTGTCCTGTCAGCTTCCCTGGTTTTAAGCCTTTCAAAATGGACTCACACTTGGCACTCTTCCTGCCCTTaGACATCCAACACTAGGTTC +
Preference number: 4 (lower is better)
Translates to: PVLSASLVLSLSKWTHTWHSSCP*TSNTRF
Trigger: GAACCTAGTGTTGGATGTCCAAGGGCAGGAAGAGTG...CCAAGTGTGAGTCCATTTTGAAAGGCTTAAAACCAGGGAAGCTGACAGGACAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507677.5
CDS-3UTR CCA 90 bp CTGAAGCAGACTCCCATGAGAACTCTGCAGGGTTTCCTTCTCCCAGTTGAGGAAACAGATAGGGGGAATTaGACTCGAGTTGAGTCTTTG +
Preference number: 4 (lower is better)
Translates to: LKQTPMRTLQGFLLPVEETDRGN*TRVESL
Trigger: CAAAGACTCAACTCGAGTCCAATTCCCCCTATCTGT...TTCCTCAACTGGGAGAAGGAAACCCTGCAGAGTTCTCATGGGAGTCTGCTTCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000507740.5
CDS-3UTR CCA 90 bp CCTCTCACCCATTCATATCCACACGTAGAAGCTAGTCTCCGGACAGGTTGTTACCTTTATTGTTGCCTATaGAGCCTTGGCATCTGGGGT +
Preference number: 4 (lower is better)
Translates to: PLTHSYPHVEASLRTGCYLYCCL*SLGIWG
Trigger: ACCCCAGATGCCAAGGCTCCATAGGCAACAATAAAG...GTAACAACCTGTCCGGAGACTAGCTTCTACGTGTGGATATGAATGGGTGAGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507740.5
CDS-3UTR CCA 90 bp TCCCAACTGGAATTCCCTTTACTTTTCAAACATACTATGTACAGGGCAACAACGTCCTCCTCCGTGAGGTaGCTGAGGTCAGGCATCTCG +
Preference number: 4 (lower is better)
Translates to: SQLEFPLLFKHTMYRATTSSSVR*LRSGIS
Trigger: CGAGATGCCTGACCTCAGCCACCTCACGGAGGAGGA...CGTTGTTGCCCTGTACATAGTATGTTTGAAAAGTAAAGGGAATTCCAGTTGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CCA 90 bp GTTCTTTTAACAACTTTACCTGGGTCCATCAGAATGTCAAGACACAGTCTTGGTTCCTCCTCCGTGAGGTaGCTGAGGTCAGGCATCTCG +
Preference number: 4 (lower is better)
Translates to: VLLTTLPGSIRMSRHSLGSSSVR*LRSGIS
Trigger: CGAGATGCCTGACCTCAGCCACCTCACGGAGGAGGA...ACCAAGACTGTGTCTTGACATTCTGATGGACCCAGGTAAAGTTGTTAAAAGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000666250.1
ENST00000668113.1
3UTR CAA 72 bp TCTATCATACCCACTACAGGACCATCATATCCTTTATaGTTGCCTATGGAGCCTTGGCATCTGGGGTCCCTG +
Preference number: 4 (lower is better)
Translates to: SIIPTTGPSYPL*LPMEPWHLGSL
Trigger: CAGGGACCCCAGATGCCAAGGCTCCATAGGCAACAATAAAGGATATGATGGTCCTGTAGTGGGTATGATAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507740.5
CDS-3UTR TCA 90 bp GGTTTAGTCAGGAGTTGCCGAAAGAGCTCATTCGTGAGCTGGGAGTTGCAAGAATCGTATCTTCTATTCTaGTCTCTGGACACAGATGGG +
Preference number: 4 (lower is better)
Translates to: GLVRSCRKSSFVSWELQESYLLF*SLDTDG
Trigger: CCCATCTGTGTCCAGAGATCAGAATAGAAGATACGA...TTCTTGCAACTCCCAGCTCACGAATGAGCTCTTTCGGCAACTCCTGACTAAACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507740.5
CDS-3UTR TCA 90 bp TGGAACAAAGCGGGTGAAGAAGGTGGGATAACCTTGCTTGCTAAGTTTTCTGGCGAGACATCATGCGTCTaGAGTTTGTACCAATGTGGC +
Preference number: 4 (lower is better)
Translates to: WNKAGEEGGITLLAKFSGETSCV*SLYQCG
Trigger: GCCACATTGGTACAAACTTCAGACGCATGATGTCTC...GCCAGAAAACTTAGCAAGCAAGGTTATCCCACCTTCTTCACCCGCTTTGTTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507677.5
CDS-3UTR TCA 90 bp GAACTCTGCAGGGTTTCCTTCTCCCAGTTGAGGAATCGCCCCAGAAGGATATGGGATAATGTTGAGCTTTaGAGATCTCGACCATCATGT +
Preference number: 4 (lower is better)
Translates to: ELCRVSFSQLRNRPRRIWDNVEL*RSRPSC
Trigger: ACATGATGGTCGAGATCTTCAAAGCTCAACATTATC...CCATATCCTTCTGGGGCGATTCCTCAACTGGGAGAAGGAAACCCTGCAGAGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507740.5
CDS-3UTR TCA 90 bp AGAAACAGGCTCAGAAGACACAACATTAAGCATGCAGTGTTACCAGGGTTTGCATGCGACTGGAGTACTTaGTGGGCTTGTCTGGACAGA +
Preference number: 4 (lower is better)
Translates to: RNRLRRHNIKHAVLPGFACDWST*WACLDR
Trigger: TCTGTCCAGACAAGCCCATCAAGTACTCCAGTCGCA...TGCAAACCCTGGTAACACTGCATGCTTAATGTTGTGTCTTCTGAGCCTGTTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR TCA 90 bp CCTCTCACCCATTCATATCCACACGTAGAAGCTAGTCTCCGGACAGGTTGTTACCTTAGCATTAGTAATTaGCGTGCCCATGGAGCTACA +
Preference number: 4 (lower is better)
Translates to: PLTHSYPHVEASLRTGCYLSISN*RAHGAT
Trigger: TGTAGCTCCATGGGCACGTCAATTACTAATGCTAAG...GTAACAACCTGTCCGGAGACTAGCTTCTACGTGTGGATATGAATGGGTGAGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507740.5
CDS-3UTR TCA 90 bp AGAAACAGGCTCAGAAGACACAACATTAAGCATGCAGTGTTACCAGGGTTTGCATCCTCCTGGGCGTTCTaGTTGGACAGACATGTAGCT +
Preference number: 4 (lower is better)
Translates to: RNRLRRHNIKHAVLPGFASSWAF*LDRHVA
Trigger: AGCTACATGTCTGTCCAATCAGAACGCCCAGGAGGA...TGCAAACCCTGGTAACACTGCATGCTTAATGTTGTGTCTTCTGAGCCTGTTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000666250.1
CDS-3UTR TCA 90 bp ATTACACTCCTCACCTGTAACACCGCTTCATGGCTGTATAGCTCCATTTCTGTGACTGCGACTTTTCCGTaGCAGACCAACGATAGCTAC +
Preference number: 4 (lower is better)
Translates to: ITLLTCNTASWLYSSISVTATFP*QTNDSY
Trigger: GTAGCTATCGTTGGTCTGTCACGGAAAAGTCGCAGT...CACAGAAATGGAGCTATACAGCCATGAAGCGGTGTTACAGGTGAGGAGTGTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000666250.1
CDS-3UTR TCA 90 bp TCCCAACTGGAATTCCCTTTACTTTTCAAACATACTATGTACAGGGCAACAACGCTGCTTCCGTTTGGCTaGGCTGAGAAGCACTGCGAC +
Preference number: 4 (lower is better)
Translates to: SQLEFPLLFKHTMYRATTLLPFG*AEKHCD
Trigger: GTCGCAGTGCTTCTCAGCTCAGCCAAACGGAAGCAG...CGTTGTTGCCCTGTACATAGTATGTTTGAAAAGTAAAGGGAATTCCAGTTGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000666250.1
CDS-3UTR GCA 90 bp AGAAACAGGCTCAGAAGACACAACATTAAGCATGCAGTGTTACCAGGGTTTGCACTATGCCTTCTCTCATaGCGTGCTCGGGACACTTCA +
Preference number: 4 (lower is better)
Translates to: RNRLRRHNIKHAVLPGFALCLLS*RARDTS
Trigger: TGAAGTGTCCCGAGCACGGCATGAGAGAAGGCATAG...TGCAAACCCTGGTAACACTGCATGCTTAATGTTGTGTCTTCTGAGCCTGTTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR GCA 90 bp CTGAAGCAGACTCCCATGAGAACTCTGCAGGGTTTCCTTCTCCCAGTTGAGGAAAAAGAAACATCACTATaGCTTCTCTCATGCCGTGCT +
Preference number: 4 (lower is better)
Translates to: LKQTPMRTLQGFLLPVEEKETSL*LLSCRA
Trigger: AGCACGGCATGAGAGAAGGCATAGTGATGTTTCTTT...TTCCTCAACTGGGAGAAGGAAACCCTGCAGAGTTCTCATGGGAGTCTGCTTCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000507740.5
CDS-3UTR GCA 90 bp TGCTGGATGATTCCTTTCACTCTTCCTGCCCTTGGACATCCAACACTAGGTTCTCCAGTTGTGCATGTGTaGTATCAGGTATTCGCGGTA +
Preference number: 4 (lower is better)
Translates to: CWMIPFTLPALGHPTLGSPVVHV*YQVFAV
Trigger: TACCGCGAATACCTGATAGCACACATGCACAACTGG...AGAACCTAGTGTTGGATGTCCAAGGGCAGGAAGAGTGAAAGGAATCATCCAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507677.5
CDS-3UTR GCA 90 bp ATATGGAGAAATCCTCTCACCCATTCATATCCACACGTAGAAGCTAGTCTCCGGTGTAGACTCTCGGCTTaGCTGTCGAGTCATCCAGTT +
Preference number: 4 (lower is better)
Translates to: IWRNPLTHSYPHVEASLRCRLSA*LSSHPV
Trigger: AACTGGATGACTCGACAGGCAAGCCGAGAGTCTACA...CCGGAGACTAGCTTCTACGTGTGGATATGAATGGGTGAGAGGATTTCTCCATAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507740.5
CDS-3UTR GCA 90 bp GTTCTTTTAACAACTTTACCTGGGTCCATCAGAATGTCAAGACACAGTCTTGGTACCCATTGCAGGTGTTaGCAGAGTCTGGCGTCCCAC +
Preference number: 4 (lower is better)
Translates to: VLLTTLPGSIRMSRHSLGTHCRC*QSLASH
Trigger: GTGGGACGCCAGACTCTGGCAACACCTGCAATGGGT...ACCAAGACTGTGTCTTGACATTCTGATGGACCCAGGTAAAGTTGTTAAAAGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR GCA 90 bp ACTGGAATTCCCTTTACTTTTCAAACATACTATGTACAGGGCAACAACGGTCACAAAGTAGCCGGCCAGTaGCTCGAAGGAGGCAGACAG +
Preference number: 4 (lower is better)
Translates to: TGIPFTFQTYYVQGNNGHKVAGQ*LEGGRQ
Trigger: CTGTCTGCCTCCTTCGAGGCACTGGCCGGCTACTTT...GTGACCGTTGTTGCCCTGTACATAGTATGTTTGAAAAGTAAAGGGAATTCCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339750.3
CDS-3UTR GCA 90 bp ACTGGAATTCCCTTTACTTTTCAAACATACTATGTACAGGGCAACAACGGTCACTCCTGCTGGACTGACTaGTCTGATTCCCGCCCAGAG +
Preference number: 4 (lower is better)
Translates to: TGIPFTFQTYYVQGNNGHSCWTD*SDSRPE
Trigger: CTCTGGGCGGGAATCAGAGCAGTCAGTCCAGCAGGA...GTGACCGTTGTTGCCCTGTACATAGTATGTTTGAAAAGTAAAGGGAATTCCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR GCA 90 bp GTTCTTTTAACAACTTTACCTGGGTCCATCAGAATGTCAAGACACAGTCTTGGTTCCTGCTGGACTGACTaGTCTGATTCCCGCCCAGAG +
Preference number: 4 (lower is better)
Translates to: VLLTTLPGSIRMSRHSLGSCWTD*SDSRPE
Trigger: CTCTGGGCGGGAATCAGAGCAGTCAGTCCAGCAGGA...ACCAAGACTGTGTCTTGACATTCTGATGGACCCAGGTAAAGTTGTTAAAAGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR GCA 90 bp AGAAACAGGCTCAGAAGACACAACATTAAGCATGCAGTGTTACCAGGGTTTGCAGTCTGCCACTCTTCCTaGTGGACTGACTGCTCTGAT +
Preference number: 4 (lower is better)
Translates to: RNRLRRHNIKHAVLPGFAVCHSS*WTDCSD
Trigger: ATCAGAGCAGTCAGTCCAGCAGGAAGAGTGGCAGAC...TGCAAACCCTGGTAACACTGCATGCTTAATGTTGTGTCTTCTGAGCCTGTTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR GCA 90 bp ATTACACTCCTCACCTGTAACACCGCTTCATGGCTGTATAGCTCCATTTCTGTGCTGCTTCACAATCCCTaGCATCCCTGTGATGATGGT +
Preference number: 4 (lower is better)
Translates to: ITLLTCNTASWLYSSISVLLHNP*HPCDDG
Trigger: ACCATCATCACAGGGATGGCAGGGATTGTGAAGCAG...CACAGAAATGGAGCTATACAGCCATGAAGCGGTGTTACAGGTGAGGAGTGTAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507740.5
ENST00000666250.1
CDS-3UTR GCA 90 bp ATTACACTCCTCACCTGTAACACCGCTTCATGGCTGTATAGCTCCATTTCTGTGTGGCTGTCTATCTGCTaGTTCACAATCCCTGCCATC +
Preference number: 4 (lower is better)
Translates to: ITLLTCNTASWLYSSISVWLSIC*FTIPAI
Trigger: GATGGCAGGGATTGTGAAGCAGCAGATAGACAGCCA...CACAGAAATGGAGCTATACAGCCATGAAGCGGTGTTACAGGTGAGGAGTGTAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507740.5
ENST00000666250.1
CDS-3UTR GCA 90 bp ACTGGAATTCCCTTTACTTTTCAAACATACTATGTACAGGGCAACAACGGTCACCACTGGTGCCCAAGGTaGCCACTGCAGTGTCAGACT +
Preference number: 4 (lower is better)
Translates to: TGIPFTFQTYYVQGNNGHHWCPR*PLQCQT
Trigger: AGTCTGACACTGCAGTGGGCACCTTGGGCACCAGTG...GTGACCGTTGTTGCCCTGTACATAGTATGTTTGAAAAGTAAAGGGAATTCCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000666250.1
CDS-3UTR GCA 90 bp ATTACACTCCTCACCTGTAACACCGCTTCATGGCTGTATAGCTCCATTTCTGTGTCTTCAGTGCATAAATaGCCACAGAACCCTGAGGGC +
Preference number: 4 (lower is better)
Translates to: ITLLTCNTASWLYSSISVSSVHK*PQNPEG
Trigger: GCCCTCAGGGTTCTGTGGGCATTTATGCACTGAAGA...CACAGAAATGGAGCTATACAGCCATGAAGCGGTGTTACAGGTGAGGAGTGTAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507740.5
CDS-3UTR CCA 90 bp ATTACACTCCTCACCTGTAACACCGCTTCATGGCTGTATAGCTCCATTTCTGTGGGGGTAGGAGGACTATaGTTTGTGGTCCTTTGTGCA +
Preference number: 4 (lower is better)
Translates to: ITLLTCNTASWLYSSISVGVGGL*FVVLCA
Trigger: TGCACAAAGGACCACAAACCATAGTCCTCCTACCCC...CACAGAAATGGAGCTATACAGCCATGAAGCGGTGTTACAGGTGAGGAGTGTAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CCA 90 bp CCTCTCACCCATTCATATCCACACGTAGAAGCTAGTCTCCGGACAGGTTGTTACTTGTATATTCAGGCGTaGAAGCCAATTCCTCCTCTG +
Preference number: 4 (lower is better)
Translates to: PLTHSYPHVEASLRTGCYLYIQA*KPIPPL
Trigger: CAGAGGAGGAATTGGCTTCCACGCCTGAATATACAA...GTAACAACCTGTCCGGAGACTAGCTTCTACGTGTGGATATGAATGGGTGAGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507740.5
CDS-3UTR CCA 90 bp GCTGGTAAAGTATTGTTTCTAGATGTGTCTGTAAGGTGTTGCCAGAGGAGACTGGCCTCCCATCTTCCCTaGAAGGGAGATCTTTTGCTC +
Preference number: 4 (lower is better)
Translates to: AGKVLFLDVSVRCCQRRLASHLP*KGDLLL
Trigger: GAGCAAAAGATCTCCCTTCCAGGGAAGATGGGAGGC...CAGTCTCCTCTGGCAACACCTTACAGACACATCTAGAAACAATACTTTACCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507677.5
CDS-3UTR CCA 90 bp AGAAACAGGCTCAGAAGACACAACATTAAGCATGCAGTGTTACCAGGGTTTGCAGCCTCCCATCTTCCCTaGAAGGGAGATCTTTTGCTC +
Preference number: 4 (lower is better)
Translates to: RNRLRRHNIKHAVLPGFAASHLP*KGDLLL
Trigger: GAGCAAAAGATCTCCCTTCCAGGGAAGATGGGAGGC...TGCAAACCCTGGTAACACTGCATGCTTAATGTTGTGTCTTCTGAGCCTGTTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CCA 90 bp GTTCTTTTAACAACTTTACCTGGGTCCATCAGAATGTCAAGACACAGTCTTGGTCTTTGGTGGAAGCTGTaGAAGCTGTCGGCCCCTTCG +
Preference number: 4 (lower is better)
Translates to: VLLTTLPGSIRMSRHSLGLWWKL*KLSAPS
Trigger: CGAAGGGGCCGACAGCTTCCACAGCTTCCACCAAAG...ACCAAGACTGTGTCTTGACATTCTGATGGACCCAGGTAAAGTTGTTAAAAGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CCA 90 bp TCCCAACTGGAATTCCCTTTACTTTTCAAACATACTATGTACAGGGCAACAACGCTTTGGTGGAAGCTGTaGAAGCTGTCGGCCCCTTCG +
Preference number: 4 (lower is better)
Translates to: SQLEFPLLFKHTMYRATTLWWKL*KLSAPS
Trigger: CGAAGGGGCCGACAGCTTCCACAGCTTCCACCAAAG...CGTTGTTGCCCTGTACATAGTATGTTTGAAAAGTAAAGGGAATTCCAGTTGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CCA 90 bp AGAAACAGGCTCAGAAGACACAACATTAAGCATGCAGTGTTACCAGGGTTTGCATGCCACTCTTCCTGCTaGACTGACTGCTCTGATTCC +
Preference number: 4 (lower is better)
Translates to: RNRLRRHNIKHAVLPGFACHSSC*TDCSDS
Trigger: GGAATCAGAGCAGTCAGTCCAGCAGGAAGAGTGGCA...TGCAAACCCTGGTAACACTGCATGCTTAATGTTGTGTCTTCTGAGCCTGTTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CCA 90 bp CCTCTCACCCATTCATATCCACACGTAGAAGCTAGTCTCCGGACAGGTTGTTACTGTGATGATGGTCAATaGTCTGACTGTATCTGGAGC +
Preference number: 4 (lower is better)
Translates to: PLTHSYPHVEASLRTGCYCDDGQ*SDCIWS
Trigger: GCTCCAGATACAGTCAGACCATTGACCATCATCACA...GTAACAACCTGTCCGGAGACTAGCTTCTACGTGTGGATATGAATGGGTGAGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507740.5
CDS-3UTR CCA 90 bp CACAGAACCCTGAGGGCATCACGAGCTGAGGGAGTTGAGACAAACACATTGAGCGAGGAAATGAAATCCTaGAGATTAAGTGACCTGAGT +
Preference number: 4 (lower is better)
Translates to: HRTLRASRAEGVETNTLSEEMKS*RLSDLS
Trigger: ACTCAGGTCACTTAATCTCCAGGATTTCATTTCCTC...GCTCAATGTGTTTGTCTCAACTCCCTCAGCTCGTGATGCCCTCAGGGTTCTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507740.5
CDS-3UTR CCA 90 bp ACTGGAATTCCCTTTACTTTTCAAACATACTATGTACAGGGCAACAACGGTCACAGCCGACATGTTTGGTaGAGCCGAACCACCCTAGGG +
Preference number: 4 (lower is better)
Translates to: TGIPFTFQTYYVQGNNGHSRHVW*SRTTLG
Trigger: CCCTAGGGTGGTTCGGCTCCACCAAACATGTCGGCT...GTGACCGTTGTTGCCCTGTACATAGTATGTTTGAAAAGTAAAGGGAATTCCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000666250.1
ENST00000668113.1
CDS-3UTR TCA 90 bp ATTACACTCCTCACCTGTAACACCGCTTCATGGCTGTATAGCTCCATTTCTGTGTCTTTGGAATGCCTATaGCTTCTCCTGTTGGAGTCC +
Preference number: 4 (lower is better)
Translates to: ITLLTCNTASWLYSSISVSLECL*LLLLES
Trigger: GGACTCCAACAGGAGAAGTCATAGGCATTCCAAAGA...CACAGAAATGGAGCTATACAGCCATGAAGCGGTGTTACAGGTGAGGAGTGTAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR TCA 90 bp GAACTCTGCAGGGTTTCCTTCTCCCAGTTGAGGAATCGCCCCAGAAGGATATGGTCGAGTTCTTTCCATTaGATAAGATCGCTGATTTTC +
Preference number: 4 (lower is better)
Translates to: ELCRVSFSQLRNRPRRIWSSSFH*IRSLIF
Trigger: GAAAATCAGCGATCTTATTCAATGGAAAGAACTCGA...CCATATCCTTCTGGGGCGATTCCTCAACTGGGAGAAGGAAACCCTGCAGAGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507740.5
CDS-3UTR TCA 90 bp ATTACACTCCTCACCTGTAACACCGCTTCATGGCTGTATAGCTCCATTTCTGTGAGCCAATTCCTCCTCTaGACTGCTCAACGAAATCTG +
Preference number: 4 (lower is better)
Translates to: ITLLTCNTASWLYSSISVSQFLL*TAQRNL
Trigger: CAGATTTCGTTGAGCAGTTCAGAGGAGGAATTGGCT...CACAGAAATGGAGCTATACAGCCATGAAGCGGTGTTACAGGTGAGGAGTGTAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR TCA 90 bp ATTACACTCCTCACCTGTAACACCGCTTCATGGCTGTATAGCTCCATTTCTGTGTCTCGAACACGAGCTTaGTCCCAAAGGGTAATCTCT +
Preference number: 4 (lower is better)
Translates to: ITLLTCNTASWLYSSISVSRTRA*SQRVIS
Trigger: AGAGATTACCCTTTGGGATCAAGCTCGTGTTCGAGA...CACAGAAATGGAGCTATACAGCCATGAAGCGGTGTTACAGGTGAGGAGTGTAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR TCA 90 bp GGTTTAGTCAGGAGTTGCCGAAAGAGCTCATTCGTGAGCTGGGAGTTGCAAGAAATCACTTATTCTCTTTaGCCTTTGCAACCTCCGTGT +
Preference number: 4 (lower is better)
Translates to: GLVRSCRKSSFVSWELQEITYSL*PLQPPC
Trigger: ACACGGAGGTTGCAAAGGTCAAAGAGAATAAGTGAT...TTCTTGCAACTCCCAGCTCACGAATGAGCTCTTTCGGCAACTCCTGACTAAACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507740.5
CDS-3UTR TCA 90 bp CCAACACTAGGTTCTTTGGCCTTTGGACTCTGGAACTTGCACCAGTGGCTTGCTGATAATGTTGAGCTTTaGAGATCTCGACCATCATGT +
Preference number: 4 (lower is better)
Translates to: PTLGSLAFGLWNLHQWLADNVEL*RSRPSC
Trigger: ACATGATGGTCGAGATCTTCAAAGCTCAACATTATC...AGCAAGCCACTGGTGCAAGTTCCAGAGTCCAAAGGCCAAAGAACCTAGTGTTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507677.5
CDS-3UTR TCA 90 bp TGGAACAAAGCGGGTGAAGAAGGTGGGATAACCTTGCTTGCTAAGTTTTCTGGCATAACATCTACTCGATaGGGAGACCCTGATGGTGAA +
Preference number: 4 (lower is better)
Translates to: WNKAGEEGGITLLAKFSGITSTR*GDPDGE
Trigger: TTCACCATCAGGGTCTCCTCATCGAGTAGATGTTAT...GCCAGAAAACTTAGCAAGCAAGGTTATCCCACCTTCTTCACCCGCTTTGTTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507677.5
CDS-3UTR TCA 90 bp ATTACACTCCTCACCTGTAACACCGCTTCATGGCTGTATAGCTCCATTTCTGTGAAGGCATCGACCTCATaGGGTTTGTATCAGGACGTT +
Preference number: 4 (lower is better)
Translates to: ITLLTCNTASWLYSSISVKASTS*GLYQDV
Trigger: AACGTCCTGATACAAACCTCATGAGGTCGATGCCTT...CACAGAAATGGAGCTATACAGCCATGAAGCGGTGTTACAGGTGAGGAGTGTAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR TCA 90 bp ATTACACTCCTCACCTGTAACACCGCTTCATGGCTGTATAGCTCCATTTCTGTGTCCATCATTCCTACCTaGATGTCACCCATTGCAGGT +
Preference number: 4 (lower is better)
Translates to: ITLLTCNTASWLYSSISVSIIPT*MSPIAG
Trigger: ACCTGCAATGGGTGACATTCAGGTAGGAATGATGGA...CACAGAAATGGAGCTATACAGCCATGAAGCGGTGTTACAGGTGAGGAGTGTAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR TCA 90 bp AGCCACAGAATTTTGTTTTTCAGAGTCCAACACATCTTAGCATTAGTAATTGACGGCCACGGGCCCGGATaGTTTCTACCTCCAGCTGTC +
Preference number: 4 (lower is better)
Translates to: SHRILFFRVQHILALVIDGHGPG*FLPPAV
Trigger: GACAGCTGGAGGTAGAAATCATCCGGGCCCGTGGCC...GTCAATTACTAATGCTAAGATGTGTTGGACTCTGAAAAACAAAATTCTGTGGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR TCA 90 bp ATTACACTCCTCACCTGTAACACCGCTTCATGGCTGTATAGCTCCATTTCTGTGGTGTGCAACTTCCTCTaGGAACACAGGATTGCTTTG +
Preference number: 4 (lower is better)
Translates to: ITLLTCNTASWLYSSISVVCNFL*EHRIAL
Trigger: CAAAGCAATCCTGTGTTCTCAGAGGAAGTTGCACAC...CACAGAAATGGAGCTATACAGCCATGAAGCGGTGTTACAGGTGAGGAGTGTAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR TCA 90 bp GAACTCTGCAGGGTTTCCTTCTCCCAGTTGAGGAATCGCCCCAGAAGGATATGGGAACTCGAGTGTCATTaGATTCCAAATCTGATAGTT +
Preference number: 4 (lower is better)
Translates to: ELCRVSFSQLRNRPRRIWELECH*IPNLIV
Trigger: AACTATCAGATTTGGAATTCAATGACACTCGAGTTC...CCATATCCTTCTGGGGCGATTCCTCAACTGGGAGAAGGAAACCCTGCAGAGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507740.5
CDS-3UTR TCA 90 bp ATATGGAGAAATCCTCTCACCCATTCATATCCACACGTAGAAGCTAGTCTCCGGCTCCTGCTTTTCACCTaGTGCTTCCTAGGATTACAC +
Preference number: 4 (lower is better)
Translates to: IWRNPLTHSYPHVEASLRLLLFT*CFLGLH
Trigger: GTGTAATCCTAGGAAGCATCAGGTGAAAAGCAGGAG...CCGGAGACTAGCTTCTACGTGTGGATATGAATGGGTGAGAGGATTTCTCCATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507740.5
CDS-3UTR TCA 90 bp GGTTTAGTCAGGAGTTGCCGAAAGAGCTCATTCGTGAGCTGGGAGTTGCAAGAATCTTTAAATGACACATaGGTTCAGGGAATGAGCTGC +
Preference number: 4 (lower is better)
Translates to: GLVRSCRKSSFVSWELQESLNDT*VQGMSC
Trigger: GCAGCTCATTCCCTGAACTCATGTGTCATTTAAAGA...TTCTTGCAACTCCCAGCTCACGAATGAGCTCTTTCGGCAACTCCTGACTAAACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507740.5
CDS-3UTR TCA 90 bp TCCCAACTGGAATTCCCTTTACTTTTCAAACATACTATGTACAGGGCAACAACGGGGTCCCTGGGAAAGTaGAGGTGTTGGCATCAATGG +
Preference number: 4 (lower is better)
Translates to: SQLEFPLLFKHTMYRATTGSLGK*RCWHQW
Trigger: CCATTGATGCCAACACCTTCACTTTCCCAGGGACCC...CGTTGTTGCCCTGTACATAGTATGTTTGAAAAGTAAAGGGAATTCCAGTTGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507740.5
CDS-3UTR TCA 90 bp CTGAAGCAGACTCCCATGAGAACTCTGCAGGGTTTCCTTCTCCCAGTTGAGGAATGGACAGATGTTTATTaGGCAGCTATGTGTCAAACA +
Preference number: 4 (lower is better)
Translates to: LKQTPMRTLQGFLLPVEEWTDVY*AAMCQT
Trigger: TGTTTGACACATAGCTGCTCAATAAACATCTGTCCA...TTCCTCAACTGGGAGAAGGAAACCCTGCAGAGTTCTCATGGGAGTCTGCTTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507740.5
CDS-3UTR GCA 90 bp GTTCTTTTAACAACTTTACCTGGGTCCATCAGAATGTCAAGACACAGTCTTGGTCCTTCTCTCATGCCGTaGTCGGGACACTTCAGCATG +
Preference number: 4 (lower is better)
Translates to: VLLTTLPGSIRMSRHSLGPSLMP*SGHFSM
Trigger: CATGCTGAAGTGTCCCGAGCACGGCATGAGAGAAGG...ACCAAGACTGTGTCTTGACATTCTGATGGACCCAGGTAAAGTTGTTAAAAGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR GCA 90 bp CTGAAGCAGACTCCCATGAGAACTCTGCAGGGTTTCCTTCTCCCAGTTGAGGAATCTGATATAGATCTTTaGCTTGATGGTCGATCCATC +
Preference number: 4 (lower is better)
Translates to: LKQTPMRTLQGFLLPVEESDIDL*LDGRSI
Trigger: GATGGATCGACCATCAAGGCAAAGATCTATATCAGA...TTCCTCAACTGGGAGAAGGAAACCCTGCAGAGTTCTCATGGGAGTCTGCTTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507740.5
CDS-3UTR GCA 90 bp CACAGAACCCTGAGGGCATCACGAGCTGAGGGAGTTGAGACAAACACATTGAGCGGAAGGGAGATCTTTTaGTCCCAAAATTGTAACTAT +
Preference number: 4 (lower is better)
Translates to: HRTLRASRAEGVETNTLSGREIF*SQNCNY
Trigger: ATAGTTACAATTTTGGGAGCAAAAGATCTCCCTTCC...GCTCAATGTGTTTGTCTCAACTCCCTCAGCTCGTGATGCCCTCAGGGTTCTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507740.5
CDS-3UTR GCA 90 bp ATTACACTCCTCACCTGTAACACCGCTTCATGGCTGTATAGCTCCATTTCTGTGATTCTCTTTGACCTTTaGAACCTCCGTGTTGGGCTC +
Preference number: 4 (lower is better)
Translates to: ITLLTCNTASWLYSSISVILFDL*NLRVGL
Trigger: GAGCCCAACACGGAGGTTGCAAAGGTCAAAGAGAAT...CACAGAAATGGAGCTATACAGCCATGAAGCGGTGTTACAGGTGAGGAGTGTAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR GCA 90 bp ATTACACTCCTCACCTGTAACACCGCTTCATGGCTGTATAGCTCCATTTCTGTGTGGCTGTCTATCTGCTaGTTCACAATCCCTGTCTCT +
Preference number: 4 (lower is better)
Translates to: ITLLTCNTASWLYSSISVWLSIC*FTIPVS
Trigger: AGAGACAGGGATTGTGAAGCAGCAGATAGACAGCCA...CACAGAAATGGAGCTATACAGCCATGAAGCGGTGTTACAGGTGAGGAGTGTAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000668113.1
CDS-3UTR GCA 90 bp ATTACACTCCTCACCTGTAACACCGCTTCATGGCTGTATAGCTCCATTTCTGTGCAAAGACATTGGGGATaGCTCACTGCTATGCCAAGA +
Preference number: 4 (lower is better)
Translates to: ITLLTCNTASWLYSSISVQRHWG*LTAMPR
Trigger: TCTTGGCATAGCAGTGAGGCATCCCCAATGTCTTTG...CACAGAAATGGAGCTATACAGCCATGAAGCGGTGTTACAGGTGAGGAGTGTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507740.5
ENST00000666250.1
CDS-3UTR CCA 90 bp GGTTTAGTCAGGAGTTGCCGAAAGAGCTCATTCGTGAGCTGGGAGTTGCAAGAAGAGGACTATGGTTTGTaGTCCTTTGTGCATAAGAAC +
Preference number: 4 (lower is better)
Translates to: GLVRSCRKSSFVSWELQEEDYGL*SFVHKN
Trigger: GTTCTTATGCACAAAGGACCACAAACCATAGTCCTC...TTCTTGCAACTCCCAGCTCACGAATGAGCTCTTTCGGCAACTCCTGACTAAACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507740.5
CDS-3UTR CCA 90 bp ATTACACTCCTCACCTGTAACACCGCTTCATGGCTGTATAGCTCCATTTCTGTGGAGCTAGGATCTAAGTaGTGCTGTTTCCGTAGTGAG +
Preference number: 4 (lower is better)
Translates to: ITLLTCNTASWLYSSISVELGSK*CCFRSE
Trigger: CTCACTACGGAAACAGCACCACTTAGATCCTAGCTC...CACAGAAATGGAGCTATACAGCCATGAAGCGGTGTTACAGGTGAGGAGTGTAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CCA 90 bp ATTACACTCCTCACCTGTAACACCGCTTCATGGCTGTATAGCTCCATTTCTGTGAACATAAGGATTCCTTaGCCTCCCATCTTCCCTGGA +
Preference number: 4 (lower is better)
Translates to: ITLLTCNTASWLYSSISVNIRIP*PPIFPG
Trigger: TCCAGGGAAGATGGGAGGCCAAGGAATCCTTATGTT...CACAGAAATGGAGCTATACAGCCATGAAGCGGTGTTACAGGTGAGGAGTGTAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CCA 90 bp ATATGGAGAAATCCTCTCACCCATTCATATCCACACGTAGAAGCTAGTCTCCGGATGGAGCTGTCTTCGTaGCATATATGGAGAAGGGTG +
Preference number: 4 (lower is better)
Translates to: IWRNPLTHSYPHVEASLRMELSS*HIWRRV
Trigger: CACCCTTCTCCATATATGCCACGAAGACAGCTCCAT...CCGGAGACTAGCTTCTACGTGTGGATATGAATGGGTGAGAGGATTTCTCCATAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507740.5
CDS-3UTR CCA 90 bp CTTTTCAAACATACTATGTACAGGGCAACAACGGTCACTGGCATAGTGCTAGTTGTTGGGCTCTCTCCATaGAGCTGTCTTCGTGGCATA +
Preference number: 4 (lower is better)
Translates to: LFKHTMYRATTVTGIVLVVGLSP*SCLRGI
Trigger: TATGCCACGAAGACAGCTCCATGGAGAGAGCCCAAC...AACTAGCACTATGCCAGTGACCGTTGTTGCCCTGTACATAGTATGTTTGAAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CCA 90 bp GTTCTTTTAACAACTTTACCTGGGTCCATCAGAATGTCAAGACACAGTCTTGGTTTGCAACCTCCGTGTTaGGCTCTCTCCATGGAGCTG +
Preference number: 4 (lower is better)
Translates to: VLLTTLPGSIRMSRHSLGLQPPC*ALSMEL
Trigger: CAGCTCCATGGAGAGAGCCCAACACGGAGGTTGCAA...ACCAAGACTGTGTCTTGACATTCTGATGGACCCAGGTAAAGTTGTTAAAAGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CCA 90 bp ACTGGAATTCCCTTTACTTTTCAAACATACTATGTACAGGGCAACAACGGTCACTATCAGGACGTTCAGTaGATCTGGAGCGGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: TGIPFTFQTYYVQGNNGHYQDVQ*IWSGWW
Trigger: CCACCACCCGCTCCAGATCCACTGAACGTCCTGATA...GTGACCGTTGTTGCCCTGTACATAGTATGTTTGAAAAGTAAAGGGAATTCCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CCA 90 bp GTTCTTTTAACAACTTTACCTGGGTCCATCAGAATGTCAAGACACAGTCTTGGTTATCAGGACGTTCAGTaGATCTGGAGCGGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: VLLTTLPGSIRMSRHSLGYQDVQ*IWSGWW
Trigger: CCACCACCCGCTCCAGATCCACTGAACGTCCTGATA...ACCAAGACTGTGTCTTGACATTCTGATGGACCCAGGTAAAGTTGTTAAAAGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CCA 90 bp CTTTTCAAACATACTATGTACAGGGCAACAACGGTCACTGGCATAGTGCTAGTTCTTGATGGGCTTGTCTaGACAGACCCAGTACGAGGA +
Preference number: 4 (lower is better)
Translates to: LFKHTMYRATTVTGIVLVLDGLV*TDPVRG
Trigger: TCCTCGTACTGGGTCTGTCCAGACAAGCCCATCAAG...AACTAGCACTATGCCAGTGACCGTTGTTGCCCTGTACATAGTATGTTTGAAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CCA 90 bp CACAGAACCCTGAGGGCATCACGAGCTGAGGGAGTTGAGACAAACACATTGAGCGTTTCTGTACTTCTTTaGACAGTGCTCCTTAGTTTT +
Preference number: 4 (lower is better)
Translates to: HRTLRASRAEGVETNTLSVSVLL*TVLLSF
Trigger: AAAACTAAGGAGCACTGTCCAAAGAAGTACAGAAAC...GCTCAATGTGTTTGTCTCAACTCCCTCAGCTCGTGATGCCCTCAGGGTTCTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507740.5
CDS-3UTR CCA 90 bp ATTACACTCCTCACCTGTAACACCGCTTCATGGCTGTATAGCTCCATTTCTGTGAGGAAATCACTGAACTaGCTATCAGAGGCCAAGCGA +
Preference number: 4 (lower is better)
Translates to: ITLLTCNTASWLYSSISVRKSLN*LSEAKR
Trigger: TCGCTTGGCCTCTGATAGCCAGTTCAGTGATTTCCT...CACAGAAATGGAGCTATACAGCCATGAAGCGGTGTTACAGGTGAGGAGTGTAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CCA 90 bp AGCCACAGAATTTTGTTTTTCAGAGTCCAACACATCTTAGCATTAGTAATTGACCGGTTCCGGGACCAGTaGGCCAGAAGCCAGGTTGGT +
Preference number: 4 (lower is better)
Translates to: SHRILFFRVQHILALVIDRFRDQ*ARSQVG
Trigger: ACCAACCTGGCTTCTGGCCCACTGGTCCCGGAACCG...GTCAATTACTAATGCTAAGATGTGTTGGACTCTGAAAAACAAAATTCTGTGGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000339750.3
CDS-3UTR CCA 90 bp GGTTTAGTCAGGAGTTGCCGAAAGAGCTCATTCGTGAGCTGGGAGTTGCAAGAATGTAACACCGCTTCATaGCTGTATAGCTCCATTTCT +
Preference number: 4 (lower is better)
Translates to: GLVRSCRKSSFVSWELQECNTAS*LYSSIS
Trigger: AGAAATGGAGCTATACAGCCATGAAGCGGTGTTACA...TTCTTGCAACTCCCAGCTCACGAATGAGCTCTTTCGGCAACTCCTGACTAAACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507740.5
CDS-3UTR CCA 90 bp CTAAGACCAGCAGTCCACTTATGTTATCGAGAAGTAGGAGACGGTGATTTCATTTGCCACTCTTCCTGCTaGACTGACTGCTCTGATTCC +
Preference number: 4 (lower is better)
Translates to: LRPAVHLCYREVGDGDFICHSSC*TDCSDS
Trigger: GGAATCAGAGCAGTCAGTCCAGCAGGAAGAGTGGCA...AATGAAATCACCGTCTCCTACTTCTCGATAACATAAGTGGACTGCTGGTCTTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507740.5
CDS-3UTR CCA 90 bp ATTACACTCCTCACCTGTAACACCGCTTCATGGCTGTATAGCTCCATTTCTGTGGAGGGTCCTTGGAACTaGGTCTGCTCATGTAGTTTT +
Preference number: 4 (lower is better)
Translates to: ITLLTCNTASWLYSSISVEGPWN*VCSCSF
Trigger: AAAACTACATGAGCAGACCCAGTTCCAAGGACCCTC...CACAGAAATGGAGCTATACAGCCATGAAGCGGTGTTACAGGTGAGGAGTGTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CCA 90 bp AGAAACAGGCTCAGAAGACACAACATTAAGCATGCAGTGTTACCAGGGTTTGCACTGAGTCAGGGCATATaGAAGATGTGTGTGGCACAG +
Preference number: 4 (lower is better)
Translates to: RNRLRRHNIKHAVLPGFALSQGI*KMCVAQ
Trigger: CTGTGCCACACACATCTTCCATATGCCCTGACTCAG...TGCAAACCCTGGTAACACTGCATGCTTAATGTTGTGTCTTCTGAGCCTGTTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507740.5
CDS-3UTR CCA 90 bp ACTGGAATTCCCTTTACTTTTCAAACATACTATGTACAGGGCAACAACGGTCACAGGAGCCGACATGTTTaGTGGAGCCGAACCACCCTA +
Preference number: 4 (lower is better)
Translates to: TGIPFTFQTYYVQGNNGHRSRHV*WSRTTL
Trigger: TAGGGTGGTTCGGCTCCACCAAACATGTCGGCTCCT...GTGACCGTTGTTGCCCTGTACATAGTATGTTTGAAAAGTAAAGGGAATTCCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000666250.1
ENST00000668113.1
3UTR CAA 72 bp GGCACAATGTGTGCAACTTCCTCTGAGAACACAGGATaGCTTTGTATCCCTAGAAACAGGCTCAGAAGACAC +
Preference number: 4 (lower is better)
Translates to: GTMCATSSENTG*LCIPRNRLRRH
Trigger: GTGTCTTCTGAGCCTGTTTCTAGGGATACAAAGCAATCCTGTGTTCTCAGAGGAAGTTGCACACATTGTGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR TCA 90 bp ATTACACTCCTCACCTGTAACACCGCTTCATGGCTGTATAGCTCCATTTCTGTGTCGTATCTTCTATTCTaGTCTCTGGACACAGATGGG +
Preference number: 4 (lower is better)
Translates to: ITLLTCNTASWLYSSISVSYLLF*SLDTDG
Trigger: CCCATCTGTGTCCAGAGATCAGAATAGAAGATACGA...CACAGAAATGGAGCTATACAGCCATGAAGCGGTGTTACAGGTGAGGAGTGTAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR TCA 90 bp CTTTTCAAACATACTATGTACAGGGCAACAACGGTCACTGGCATAGTGCTAGTTATCACTTCGGTAGCGTaGCTGGTACTCTTCCTCTCT +
Preference number: 4 (lower is better)
Translates to: LFKHTMYRATTVTGIVLVITSVA*LVLFLS
Trigger: AGAGAGGAAGAGTACCAGTCACGCTACCGAAGTGAT...AACTAGCACTATGCCAGTGACCGTTGTTGCCCTGTACATAGTATGTTTGAAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR TCA 90 bp GTTCTTTTAACAACTTTACCTGGGTCCATCAGAATGTCAAGACACAGTCTTGGTGCCAAGCATTGCTCCTaGATCTCGAGGTACACTTCC +
Preference number: 4 (lower is better)
Translates to: VLLTTLPGSIRMSRHSLGAKHCS*ISRYTS
Trigger: GGAAGTGTACCTCGAGATTCAGGAGCAATGCTTGGC...ACCAAGACTGTGTCTTGACATTCTGATGGACCCAGGTAAAGTTGTTAAAAGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR TCA 90 bp ACTGGAATTCCCTTTACTTTTCAAACATACTATGTACAGGGCAACAACGGTCACGCCAAGCATTGCTCCTaGATCTCGAGGTACACTTCC +
Preference number: 4 (lower is better)
Translates to: TGIPFTFQTYYVQGNNGHAKHCS*ISRYTS
Trigger: GGAAGTGTACCTCGAGATTCAGGAGCAATGCTTGGC...GTGACCGTTGTTGCCCTGTACATAGTATGTTTGAAAAGTAAAGGGAATTCCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR TCA 90 bp GCTGGTAAAGTATTGTTTCTAGATGTGTCTGTAAGGTGTTGCCAGAGGAGACTGTCTCGAACACGAGCTTaGTCCCAAAGGGTAATCTCT +
Preference number: 4 (lower is better)
Translates to: AGKVLFLDVSVRCCQRRLSRTRA*SQRVIS
Trigger: AGAGATTACCCTTTGGGATCAAGCTCGTGTTCGAGA...CAGTCTCCTCTGGCAACACCTTACAGACACATCTAGAAACAATACTTTACCAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507677.5
CDS-3UTR TCA 90 bp AGAAACAGGCTCAGAAGACACAACATTAAGCATGCAGTGTTACCAGGGTTTGCAAGGCCGTTGTTCTGTTaGTCTGGATCTGTGATATGG +
Preference number: 4 (lower is better)
Translates to: RNRLRRHNIKHAVLPGFARPLFC*SGSVIW
Trigger: CCATATCACAGATCCAGATCAACAGAACAACGGCCT...TGCAAACCCTGGTAACACTGCATGCTTAATGTTGTGTCTTCTGAGCCTGTTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR TCA 90 bp ACTGGAATTCCCTTTACTTTTCAAACATACTATGTACAGGGCAACAACGGTCACTGCGACTGGAGTACTTaGTGGGCTTGTCTGGACAGA +
Preference number: 4 (lower is better)
Translates to: TGIPFTFQTYYVQGNNGHCDWST*WACLDR
Trigger: TCTGTCCAGACAAGCCCATCAAGTACTCCAGTCGCA...GTGACCGTTGTTGCCCTGTACATAGTATGTTTGAAAAGTAAAGGGAATTCCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR TCA 90 bp AGAAACAGGCTCAGAAGACACAACATTAAGCATGCAGTGTTACCAGGGTTTGCAGTGTGCAACTTCCTCTaGGAACACAGGATTGCTTTG +
Preference number: 4 (lower is better)
Translates to: RNRLRRHNIKHAVLPGFAVCNFL*EHRIAL
Trigger: CAAAGCAATCCTGTGTTCTCAGAGGAAGTTGCACAC...TGCAAACCCTGGTAACACTGCATGCTTAATGTTGTGTCTTCTGAGCCTGTTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR TCA 90 bp AGAAACAGGCTCAGAAGACACAACATTAAGCATGCAGTGTTACCAGGGTTTGCACTCCTGCTTTTCACCTaGTGCTTCCTAGGATTACAC +
Preference number: 4 (lower is better)
Translates to: RNRLRRHNIKHAVLPGFALLLFT*CFLGLH
Trigger: GTGTAATCCTAGGAAGCATCAGGTGAAAAGCAGGAG...TGCAAACCCTGGTAACACTGCATGCTTAATGTTGTGTCTTCTGAGCCTGTTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR TCA 90 bp AGAAACAGGCTCAGAAGACACAACATTAAGCATGCAGTGTTACCAGGGTTTGCAGCTGATGATTGTTCCTaGCCACTTCTTTGGTCTCCT +
Preference number: 4 (lower is better)
Translates to: RNRLRRHNIKHAVLPGFAADDCS*PLLWSP
Trigger: AGGAGACCAAAGAAGTGGTCAGGAACAATCATCAGC...TGCAAACCCTGGTAACACTGCATGCTTAATGTTGTGTCTTCTGAGCCTGTTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR TCA 90 bp ATTACACTCCTCACCTGTAACACCGCTTCATGGCTGTATAGCTCCATTTCTGTGTTTGGTTTCTTCTCCTaGGGTGCCTCCTCATTTCTT +
Preference number: 4 (lower is better)
Translates to: ITLLTCNTASWLYSSISVFGFFS*GASSFL
Trigger: AAGAAATGAGGAGGCACCTCAGGAGAAGAAACCAAA...CACAGAAATGGAGCTATACAGCCATGAAGCGGTGTTACAGGTGAGGAGTGTAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000666250.1
ENST00000668113.1
CDS-3UTR TCA 90 bp ACTGGAATTCCCTTTACTTTTCAAACATACTATGTACAGGGCAACAACGGTCACATGTCACTGGCAATGTaGTGCTTCACGCCTGACCCA +
Preference number: 4 (lower is better)
Translates to: TGIPFTFQTYYVQGNNGHMSLAM*CFTPDP
Trigger: TGGGTCAGGCGTGAAGCATCACATTGCCAGTGACAT...GTGACCGTTGTTGCCCTGTACATAGTATGTTTGAAAAGTAAAGGGAATTCCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000666250.1
ENST00000668113.1
CDS-3UTR TCA 90 bp ATTACACTCCTCACCTGTAACACCGCTTCATGGCTGTATAGCTCCATTTCTGTGTGTCATGTTCTTCCCTaGTATGCCCATTTGTCTGCT +
Preference number: 4 (lower is better)
Translates to: ITLLTCNTASWLYSSISVCHVLP*YAHLSA
Trigger: AGCAGACAAATGGGCATATCAGGGAAGAACATGACA...CACAGAAATGGAGCTATACAGCCATGAAGCGGTGTTACAGGTGAGGAGTGTAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000666250.1
CDS-3UTR GCA 90 bp ATTACACTCCTCACCTGTAACACCGCTTCATGGCTGTATAGCTCCATTTCTGTGCTAGGATCTAAGTGGTaGTGTTTCCGTAGTGAGTCA +
Preference number: 4 (lower is better)
Translates to: ITLLTCNTASWLYSSISVLGSKW*CFRSES
Trigger: TGACTCACTACGGAAACAGCACCACTTAGATCCTAG...CACAGAAATGGAGCTATACAGCCATGAAGCGGTGTTACAGGTGAGGAGTGTAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR GCA 90 bp AGAAACAGGCTCAGAAGACACAACATTAAGCATGCAGTGTTACCAGGGTTTGCAATTCCTCCTCTGAACTaGTCAACGAAATCTGGCGCA +
Preference number: 4 (lower is better)
Translates to: RNRLRRHNIKHAVLPGFAIPPLN*STKSGA
Trigger: TGCGCCAGATTTCGTTGAGCAGTTCAGAGGAGGAAT...TGCAAACCCTGGTAACACTGCATGCTTAATGTTGTGTCTTCTGAGCCTGTTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR GCA 90 bp ATATGGAGAAATCCTCTCACCCATTCATATCCACACGTAGAAGCTAGTCTCCGGACTGGACTCCAGTTGTaGATGTGTGCTATCAGGTAT +
Preference number: 4 (lower is better)
Translates to: IWRNPLTHSYPHVEASLRTGLQL*MCAIRY
Trigger: ATACCTGATAGCACACATGCACAACTGGAGTCCAGT...CCGGAGACTAGCTTCTACGTGTGGATATGAATGGGTGAGAGGATTTCTCCATAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507740.5
CDS-3UTR GCA 90 bp ATTACACTCCTCACCTGTAACACCGCTTCATGGCTGTATAGCTCCATTTCTGTGACTGGACTCCAGTTGTaGATGTGTGCTATCAGGTAT +
Preference number: 4 (lower is better)
Translates to: ITLLTCNTASWLYSSISVTGLQL*MCAIRY
Trigger: ATACCTGATAGCACACATGCACAACTGGAGTCCAGT...CACAGAAATGGAGCTATACAGCCATGAAGCGGTGTTACAGGTGAGGAGTGTAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR GCA 90 bp CTTTTCAAACATACTATGTACAGGGCAACAACGGTCACTGGCATAGTGCTAGTTTGTAGACTCTCGGCTTaGCTGTCGAGTCATCCAGTT +
Preference number: 4 (lower is better)
Translates to: LFKHTMYRATTVTGIVLVCRLSA*LSSHPV
Trigger: AACTGGATGACTCGACAGGCAAGCCGAGAGTCTACA...AACTAGCACTATGCCAGTGACCGTTGTTGCCCTGTACATAGTATGTTTGAAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR GCA 90 bp ATTACACTCCTCACCTGTAACACCGCTTCATGGCTGTATAGCTCCATTTCTGTGAAGATTTGTGATCCATaGGGCCATAATCTCCCCAGA +
Preference number: 4 (lower is better)
Translates to: ITLLTCNTASWLYSSISVKICDP*GHNLPR
Trigger: TCTGGGGAGATTATGGCCGCATGGATCACAAATCTT...CACAGAAATGGAGCTATACAGCCATGAAGCGGTGTTACAGGTGAGGAGTGTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR GCA 90 bp ACTGGAATTCCCTTTACTTTTCAAACATACTATGTACAGGGCAACAACGGTCACGTCTGCCACTCTTCCTaGTGGACTGACTGCTCTGAT +
Preference number: 4 (lower is better)
Translates to: TGIPFTFQTYYVQGNNGHVCHSS*WTDCSD
Trigger: ATCAGAGCAGTCAGTCCAGCAGGAAGAGTGGCAGAC...GTGACCGTTGTTGCCCTGTACATAGTATGTTTGAAAAGTAAAGGGAATTCCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR GCA 90 bp GTTCTTTTAACAACTTTACCTGGGTCCATCAGAATGTCAAGACACAGTCTTGGTTGCCAGGTTACAGGGTaGAAAGACATTGGGGATGCC +
Preference number: 4 (lower is better)
Translates to: VLLTTLPGSIRMSRHSLGCQVTG*KDIGDA
Trigger: GGCATCCCCAATGTCTTTGCACCCTGTAACCTGGCA...ACCAAGACTGTGTCTTGACATTCTGATGGACCCAGGTAAAGTTGTTAAAAGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000507740.5
ENST00000666250.1
CDS-3UTR GCA 90 bp AGAAACAGGCTCAGAAGACACAACATTAAGCATGCAGTGTTACCAGGGTTTGCAATATGGCTGTCTATCTaGTGCTTCACAATCCCTGCC +
Preference number: 4 (lower is better)
Translates to: RNRLRRHNIKHAVLPGFAIWLSI*CFTIPA
Trigger: GGCAGGGATTGTGAAGCAGCAGATAGACAGCCATAT...TGCAAACCCTGGTAACACTGCATGCTTAATGTTGTGTCTTCTGAGCCTGTTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507740.5
ENST00000666250.1
CDS-3UTR GCA 90 bp CCTCTCACCCATTCATATCCACACGTAGAAGCTAGTCTCCGGACAGGTTGTTACGCTTTGGTGATCTCTTaGCTAATTCTATCATACCCA +
Preference number: 4 (lower is better)
Translates to: PLTHSYPHVEASLRTGCYALVIS*LILSYP
Trigger: TGGGTATGATAGAATTAGGCAAGAGATCACCAAAGC...GTAACAACCTGTCCGGAGACTAGCTTCTACGTGTGGATATGAATGGGTGAGAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507740.5
CDS-3UTR GCA 90 bp GAACTCTGCAGGGTTTCCTTCTCCCAGTTGAGGAATCGCCCCAGAAGGATATGGCACATGATTTTTACGTaGACAGAATGTCAAGGTTTA +
Preference number: 4 (lower is better)
Translates to: ELCRVSFSQLRNRPRRIWHMIFT*TECQGL
Trigger: TAAACCTTGACATTCTGTGCACGTAAAAATCATGTG...CCATATCCTTCTGGGGCGATTCCTCAACTGGGAGAAGGAAACCCTGCAGAGTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000507740.5
CDS-3UTR GCA 90 bp CTTTTCAAACATACTATGTACAGGGCAACAACGGTCACTGGCATAGTGCTAGTTACCTTGAGCACGGACTaGTCCTTCTCCTCTTCTTTC +
Preference number: 4 (lower is better)
Translates to: LFKHTMYRATTVTGIVLVTLSTD*SFSSSF
Trigger: GAAAGAAGAGGAGAAGGAGCAGTCCGTGCTCAAGGT...AACTAGCACTATGCCAGTGACCGTTGTTGCCCTGTACATAGTATGTTTGAAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000668113.1
CDS-3UTR CCA 90 bp ATTACACTCCTCACCTGTAACACCGCTTCATGGCTGTATAGCTCCATTTCTGTGACAGAATTGCAGACCTaGCGCAATGTCTCAAATTGC +
Preference number: 4 (lower is better)
Translates to: ITLLTCNTASWLYSSISVTELQT*RNVSNC
Trigger: GCAATTTGAGACATTGCGCCAGGTCTGCAATTCTGT...CACAGAAATGGAGCTATACAGCCATGAAGCGGTGTTACAGGTGAGGAGTGTAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507740.5
CDS-3UTR CCA 90 bp GGTTTAGTCAGGAGTTGCCGAAAGAGCTCATTCGTGAGCTGGGAGTTGCAAGAATTCTATTCTGATCTCTaGACACAGATGGGCTTCTTT +
Preference number: 4 (lower is better)
Translates to: GLVRSCRKSSFVSWELQEFYSDL*TQMGFF
Trigger: AAAGAAGCCCATCTGTGTCCAGAGATCAGAATAGAA...TTCTTGCAACTCCCAGCTCACGAATGAGCTCTTTCGGCAACTCCTGACTAAACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507740.5
CDS-3UTR CCA 90 bp GAACTCTGCAGGGTTTCCTTCTCCCAGTTGAGGAATCGCCCCAGAAGGATATGGTATGACTTCTCCTGTTaGAGTCCCTATAACTTAAAT +
Preference number: 4 (lower is better)
Translates to: ELCRVSFSQLRNRPRRIWYDFSC*SPYNLN
Trigger: ATTTAAGTTATAGGGACTCCAACAGGAGAAGTCATA...CCATATCCTTCTGGGGCGATTCCTCAACTGGGAGAAGGAAACCCTGCAGAGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507740.5
CDS-3UTR CCA 90 bp ATTACACTCCTCACCTGTAACACCGCTTCATGGCTGTATAGCTCCATTTCTGTGTTCTTCATAGGGTTGTaGCTTTACTGGATAACGGGC +
Preference number: 4 (lower is better)
Translates to: ITLLTCNTASWLYSSISVFFIGL*LYWITG
Trigger: GCCCGTTATCCAGTAAAGCCACAACCCTATGAAGAA...CACAGAAATGGAGCTATACAGCCATGAAGCGGTGTTACAGGTGAGGAGTGTAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CCA 90 bp CTTTTCAAACATACTATGTACAGGGCAACAACGGTCACTGGCATAGTGCTAGTTGGGGTAGGAGGACTATaGTTTGTGGTCCTTTGTGCA +
Preference number: 4 (lower is better)
Translates to: LFKHTMYRATTVTGIVLVGVGGL*FVVLCA
Trigger: TGCACAAAGGACCACAAACCATAGTCCTCCTACCCC...AACTAGCACTATGCCAGTGACCGTTGTTGCCCTGTACATAGTATGTTTGAAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CCA 90 bp CTTTTCAAACATACTATGTACAGGGCAACAACGGTCACTGGCATAGTGCTAGTTAGTCTGGTCTATCTATaGGTAGTGGACTCCTCCTGG +
Preference number: 4 (lower is better)
Translates to: LFKHTMYRATTVTGIVLVSLVYL*VVDSSW
Trigger: CCAGGAGGAGTCCACTACCCATAGATAGACCAGACT...AACTAGCACTATGCCAGTGACCGTTGTTGCCCTGTACATAGTATGTTTGAAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CCA 90 bp ATATGGAGAAATCCTCTCACCCATTCATATCCACACGTAGAAGCTAGTCTCCGGCTCACTGACTCTGACTaGTCTGAACTGAGAGAATCA +
Preference number: 4 (lower is better)
Translates to: IWRNPLTHSYPHVEASLRLTDSD*SELRES
Trigger: TGATTCTCTCAGTTCAGACCAGTCAGAGTCAGTGAG...CCGGAGACTAGCTTCTACGTGTGGATATGAATGGGTGAGAGGATTTCTCCATAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507740.5
CDS-3UTR CCA 90 bp ATTACACTCCTCACCTGTAACACCGCTTCATGGCTGTATAGCTCCATTTCTGTGTTGTATATTCAGGCGTaGAAGCCAATTCCTCCTCTG +
Preference number: 4 (lower is better)
Translates to: ITLLTCNTASWLYSSISVLYIQA*KPIPPL
Trigger: CAGAGGAGGAATTGGCTTCCACGCCTGAATATACAA...CACAGAAATGGAGCTATACAGCCATGAAGCGGTGTTACAGGTGAGGAGTGTAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CCA 90 bp ATATGGAGAAATCCTCTCACCCATTCATATCCACACGTAGAAGCTAGTCTCCGGATCTCCATCTTTAGATaGTTGCCAGGTTACAGGGTG +
Preference number: 4 (lower is better)
Translates to: IWRNPLTHSYPHVEASLRISIFR*LPGYRV
Trigger: CACCCTGTAACCTGGCAACCATCTAAAGATGGAGAT...CCGGAGACTAGCTTCTACGTGTGGATATGAATGGGTGAGAGGATTTCTCCATAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507740.5
CDS-3UTR CCA 90 bp AGAAACAGGCTCAGAAGACACAACATTAAGCATGCAGTGTTACCAGGGTTTGCAAACATAAGGATTCCTTaGCCTCCCATCTTCCCTGGA +
Preference number: 4 (lower is better)
Translates to: RNRLRRHNIKHAVLPGFANIRIP*PPIFPG
Trigger: TCCAGGGAAGATGGGAGGCCAAGGAATCCTTATGTT...TGCAAACCCTGGTAACACTGCATGCTTAATGTTGTGTCTTCTGAGCCTGTTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CCA 90 bp TTAAGACCTGTAGCTGCAGATTTTCTGAGCCATTCTTCCCACTGCACATGCTTTATGGAGCTGTCTTCGTaGCATATATGGAGAAGGGTG +
Preference number: 4 (lower is better)
Translates to: LRPVAADFLSHSSHCTCFMELSS*HIWRRV
Trigger: CACCCTTCTCCATATATGCCACGAAGACAGCTCCAT...AAAGCATGTGCAGTGGGAAGAATGGCTCAGAAAATCTGCAGCTACAGGTCTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507677.5
CDS-3UTR CCA 90 bp TCCCAACTGGAATTCCCTTTACTTTTCAAACATACTATGTACAGGGCAACAACGGTTGGGCTCTCTCCATaGAGCTGTCTTCGTGGCATA +
Preference number: 4 (lower is better)
Translates to: SQLEFPLLFKHTMYRATTVGLSP*SCLRGI
Trigger: TATGCCACGAAGACAGCTCCATGGAGAGAGCCCAAC...CGTTGTTGCCCTGTACATAGTATGTTTGAAAAGTAAAGGGAATTCCAGTTGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CCA 90 bp ACTGGAATTCCCTTTACTTTTCAAACATACTATGTACAGGGCAACAACGGTCACGTTGGGCTCTCTCCATaGAGCTGTCTTCGTGGCATA +
Preference number: 4 (lower is better)
Translates to: TGIPFTFQTYYVQGNNGHVGLSP*SCLRGI
Trigger: TATGCCACGAAGACAGCTCCATGGAGAGAGCCCAAC...GTGACCGTTGTTGCCCTGTACATAGTATGTTTGAAAAGTAAAGGGAATTCCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CCA 90 bp AGCCACAGAATTTTGTTTTTCAGAGTCCAACACATCTTAGCATTAGTAATTGACTGGATCTGGAGCGGGTaGTGGTCCGCTCAAGGAGAG +
Preference number: 4 (lower is better)
Translates to: SHRILFFRVQHILALVIDWIWSG*WSAQGE
Trigger: CTCTCCTTGAGCGGACCACCACCCGCTCCAGATCCA...GTCAATTACTAATGCTAAGATGTGTTGGACTCTGAAAAACAAAATTCTGTGGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CCA 90 bp GTTCTTTTAACAACTTTACCTGGGTCCATCAGAATGTCAAGACACAGTCTTGGTCAACGTTCCCTTTGGTaGAAGCTGTGGAAGCTGTCG +
Preference number: 4 (lower is better)
Translates to: VLLTTLPGSIRMSRHSLGQRSLW*KLWKLS
Trigger: CGACAGCTTCCACAGCTTCCACCAAAGGGAACGTTG...ACCAAGACTGTGTCTTGACATTCTGATGGACCCAGGTAAAGTTGTTAAAAGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CCA 90 bp AGAAACAGGCTCAGAAGACACAACATTAAGCATGCAGTGTTACCAGGGTTTGCACAGTGTCTTGGAACCTaGTTTTACAACAAGGCCACG +
Preference number: 4 (lower is better)
Translates to: RNRLRRHNIKHAVLPGFAQCLGT*FYNKAT
Trigger: CGTGGCCTTGTTGTAAAACCAGGTTCCAAGACACTG...TGCAAACCCTGGTAACACTGCATGCTTAATGTTGTGTCTTCTGAGCCTGTTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CCA 90 bp ATTACACTCCTCACCTGTAACACCGCTTCATGGCTGTATAGCTCCATTTCTGTGGTGCTGGCAGTGTCTTaGAACCTGGTTTTACAACAA +
Preference number: 4 (lower is better)
Translates to: ITLLTCNTASWLYSSISVVLAVS*NLVLQQ
Trigger: TTGTTGTAAAACCAGGTTCCAAGACACTGCCAGCAC...CACAGAAATGGAGCTATACAGCCATGAAGCGGTGTTACAGGTGAGGAGTGTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CCA 90 bp AGAAACAGGCTCAGAAGACACAACATTAAGCATGCAGTGTTACCAGGGTTTGCATTTTACATACGGTGCTaGCAGTGTCTTGGAACCTGG +
Preference number: 4 (lower is better)
Translates to: RNRLRRHNIKHAVLPGFAFYIRC*QCLGTW
Trigger: CCAGGTTCCAAGACACTGCCAGCACCGTATGTAAAA...TGCAAACCCTGGTAACACTGCATGCTTAATGTTGTGTCTTCTGAGCCTGTTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CCA 90 bp TCCCAACTGGAATTCCCTTTACTTTTCAAACATACTATGTACAGGGCAACAACGGGACCTCCAATTTATTaGAGAGGGGTCCAGAGGAGG +
Preference number: 4 (lower is better)
Translates to: SQLEFPLLFKHTMYRATTGPPIY*RGVQRR
Trigger: CCTCCTCTGGACCCCTCTCCAATAAATTGGAGGTCC...CGTTGTTGCCCTGTACATAGTATGTTTGAAAAGTAAAGGGAATTCCAGTTGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339750.3
CDS-3UTR CCA 90 bp AGAAACAGGCTCAGAAGACACAACATTAAGCATGCAGTGTTACCAGGGTTTGCATCCATGGCTTCAGATTaGACCAGAACTCGAGTGTCA +
Preference number: 4 (lower is better)
Translates to: RNRLRRHNIKHAVLPGFASMASD*TRTRVS
Trigger: TGACACTCGAGTTCTGGTCCAATCTGAAGCCATGGA...TGCAAACCCTGGTAACACTGCATGCTTAATGTTGTGTCTTCTGAGCCTGTTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CCA 90 bp AGAAACAGGCTCAGAAGACACAACATTAAGCATGCAGTGTTACCAGGGTTTGCAATAGCTCCATTTCTGTaGCATATCAGGGCTTTGGGG +
Preference number: 4 (lower is better)
Translates to: RNRLRRHNIKHAVLPGFAIAPFL*HIRALG
Trigger: CCCCAAAGCCCTGATATGCCACAGAAATGGAGCTAT...TGCAAACCCTGGTAACACTGCATGCTTAATGTTGTGTCTTCTGAGCCTGTTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CCA 90 bp ACTGGAATTCCCTTTACTTTTCAAACATACTATGTACAGGGCAACAACGGTCACTGCCACTCTTCCTGCTaGACTGACTGCTCTGATTCC +
Preference number: 4 (lower is better)
Translates to: TGIPFTFQTYYVQGNNGHCHSSC*TDCSDS
Trigger: GGAATCAGAGCAGTCAGTCCAGCAGGAAGAGTGGCA...GTGACCGTTGTTGCCCTGTACATAGTATGTTTGAAAAGTAAAGGGAATTCCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CCA 90 bp ATTACACTCCTCACCTGTAACACCGCTTCATGGCTGTATAGCTCCATTTCTGTGTGTGATGATGGTCAATaGTCTGACTGTATCTGGAGC +
Preference number: 4 (lower is better)
Translates to: ITLLTCNTASWLYSSISVCDDGQ*SDCIWS
Trigger: GCTCCAGATACAGTCAGACCATTGACCATCATCACA...CACAGAAATGGAGCTATACAGCCATGAAGCGGTGTTACAGGTGAGGAGTGTAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507740.5
ENST00000666250.1
CDS-3UTR CCA 90 bp CTTTTCAAACATACTATGTACAGGGCAACAACGGTCACTGGCATAGTGCTAGTTACTGCAGTGTCAGACTaGCTGCCATCATTCTTCTCC +
Preference number: 4 (lower is better)
Translates to: LFKHTMYRATTVTGIVLVTAVSD*LPSFFS
Trigger: GGAGAAGAATGATGGCAGCCAGTCTGACACTGCAGT...AACTAGCACTATGCCAGTGACCGTTGTTGCCCTGTACATAGTATGTTTGAAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000666250.1
CDS-3UTR CCA 90 bp CTTTTCAAACATACTATGTACAGGGCAACAACGGTCACTGGCATAGTGCTAGTTAGGCTCAGGGCTGTGTaGGGAGAAAAGTCAGAGAAA +
Preference number: 4 (lower is better)
Translates to: LFKHTMYRATTVTGIVLVRLRAV*GEKSEK
Trigger: TTTCTCTGACTTTTCTCCCCACACAGCCCTGAGCCT...AACTAGCACTATGCCAGTGACCGTTGTTGCCCTGTACATAGTATGTTTGAAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507740.5
CDS-3UTR CCA 90 bp ACTGGAATTCCCTTTACTTTTCAAACATACTATGTACAGGGCAACAACGGTCACGCAGATACCACAGGTTaGCGCATCACCCTTCTGTTC +
Preference number: 4 (lower is better)
Translates to: TGIPFTFQTYYVQGNNGHADTTG*RITLLF
Trigger: GAACAGAAGGGTGATGCGCCAACCTGTGGTATCTGC...GTGACCGTTGTTGCCCTGTACATAGTATGTTTGAAAAGTAAAGGGAATTCCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CCA 90 bp TCCCAACTGGAATTCCCTTTACTTTTCAAACATACTATGTACAGGGCAACAACGGCAGATACCACAGGTTaGCGCATCACCCTTCTGTTC +
Preference number: 4 (lower is better)
Translates to: SQLEFPLLFKHTMYRATTADTTG*RITLLF
Trigger: GAACAGAAGGGTGATGCGCCAACCTGTGGTATCTGC...CGTTGTTGCCCTGTACATAGTATGTTTGAAAAGTAAAGGGAATTCCAGTTGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000666250.1
ENST00000668113.1
3UTR CAA 72 bp TGGACTAAGCCACTACTGGCTTCTCCCTTCCCCAGCTaGCAGAAATTCTATGGTGGGACTTTGTCTTATAAT +
Preference number: 4 (lower is better)
Translates to: WTKPLLASPFPS*QKFYGGTLSYN
Trigger: ATTATAAGACAAAGTCCCACCATAGAATTTCTGCAAGCTGGGGAAGGGAGAAGCCAGTAGTGGCTTAGTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507677.5
CDS-3UTR TCA 90 bp TCCCAACTGGAATTCCCTTTACTTTTCAAACATACTATGTACAGGGCAACAACGATCACTTCGGTAGCGTaGCTGGTACTCTTCCTCTCT +
Preference number: 4 (lower is better)
Translates to: SQLEFPLLFKHTMYRATTITSVA*LVLFLS
Trigger: AGAGAGGAAGAGTACCAGTCACGCTACCGAAGTGAT...CGTTGTTGCCCTGTACATAGTATGTTTGAAAAGTAAAGGGAATTCCAGTTGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR TCA 90 bp ATTACACTCCTCACCTGTAACACCGCTTCATGGCTGTATAGCTCCATTTCTGTGCTGACTGGTCTGAACTaGGAGAATCATTCCTTAACA +
Preference number: 4 (lower is better)
Translates to: ITLLTCNTASWLYSSISVLTGLN*ENHSLT
Trigger: TGTTAAGGAATGATTCTCTCAGTTCAGACCAGTCAG...CACAGAAATGGAGCTATACAGCCATGAAGCGGTGTTACAGGTGAGGAGTGTAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR TCA 90 bp TCCCAACTGGAATTCCCTTTACTTTTCAAACATACTATGTACAGGGCAACAACGTGCACAAAGCCGACCTaGTTCAGTCATCTTTCCTCC +
Preference number: 4 (lower is better)
Translates to: SQLEFPLLFKHTMYRATTCTKPT*FSHLSS
Trigger: GGAGGAAAGATGACTGAATCAGGTCGGCTTTGTGCA...CGTTGTTGCCCTGTACATAGTATGTTTGAAAAGTAAAGGGAATTCCAGTTGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR TCA 90 bp GTTCTTTTAACAACTTTACCTGGGTCCATCAGAATGTCAAGACACAGTCTTGGTTGCACAAAGCCGACCTaGTTCAGTCATCTTTCCTCC +
Preference number: 4 (lower is better)
Translates to: VLLTTLPGSIRMSRHSLGCTKPT*FSHLSS
Trigger: GGAGGAAAGATGACTGAATCAGGTCGGCTTTGTGCA...ACCAAGACTGTGTCTTGACATTCTGATGGACCCAGGTAAAGTTGTTAAAAGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR TCA 90 bp TGGAACAAAGCGGGTGAAGAAGGTGGGATAACCTTGCTTGCTAAGTTTTCTGGCATCTCCAATAGGCCTTaGAACTACAAGTTCTACTTG +
Preference number: 4 (lower is better)
Translates to: WNKAGEEGGITLLAKFSGISNRP*NYKFYL
Trigger: CAAGTAGAACTTGTAGTTTCAAGGCCTATTGGAGAT...GCCAGAAAACTTAGCAAGCAAGGTTATCCCACCTTCTTCACCCGCTTTGTTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507677.5
CDS-3UTR TCA 90 bp CTTTTCAAACATACTATGTACAGGGCAACAACGGTCACTGGCATAGTGCTAGTTTCTCGAACACGAGCTTaGTCCCAAAGGGTAATCTCT +
Preference number: 4 (lower is better)
Translates to: LFKHTMYRATTVTGIVLVSRTRA*SQRVIS
Trigger: AGAGATTACCCTTTGGGATCAAGCTCGTGTTCGAGA...AACTAGCACTATGCCAGTGACCGTTGTTGCCCTGTACATAGTATGTTTGAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR TCA 90 bp ATTACACTCCTCACCTGTAACACCGCTTCATGGCTGTATAGCTCCATTTCTGTGATCACTTATTCTCTTTaGCCTTTGCAACCTCCGTGT +
Preference number: 4 (lower is better)
Translates to: ITLLTCNTASWLYSSISVITYSL*PLQPPC
Trigger: ACACGGAGGTTGCAAAGGTCAAAGAGAATAAGTGAT...CACAGAAATGGAGCTATACAGCCATGAAGCGGTGTTACAGGTGAGGAGTGTAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR TCA 90 bp AGAAACAGGCTCAGAAGACACAACATTAAGCATGCAGTGTTACCAGGGTTTGCAATAACATCTACTCGATaGGGAGACCCTGATGGTGAA +
Preference number: 4 (lower is better)
Translates to: RNRLRRHNIKHAVLPGFAITSTR*GDPDGE
Trigger: TTCACCATCAGGGTCTCCTCATCGAGTAGATGTTAT...TGCAAACCCTGGTAACACTGCATGCTTAATGTTGTGTCTTCTGAGCCTGTTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR TCA 90 bp CTTTTCAAACATACTATGTACAGGGCAACAACGGTCACTGGCATAGTGCTAGTTCTCCTGCTTTTCACCTaGTGCTTCCTAGGATTACAC +
Preference number: 4 (lower is better)
Translates to: LFKHTMYRATTVTGIVLVLLLFT*CFLGLH
Trigger: GTGTAATCCTAGGAAGCATCAGGTGAAAAGCAGGAG...AACTAGCACTATGCCAGTGACCGTTGTTGCCCTGTACATAGTATGTTTGAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR TCA 90 bp GGTTTAGTCAGGAGTTGCCGAAAGAGCTCATTCGTGAGCTGGGAGTTGCAAGAATCGTCAAATACATGCTaGCTTACTTTAATGTACTCC +
Preference number: 4 (lower is better)
Translates to: GLVRSCRKSSFVSWELQESSNTC*LTLMYS
Trigger: GGAGTACATTAAAGTAAGTCAGCATGTATTTGACGA...TTCTTGCAACTCCCAGCTCACGAATGAGCTCTTTCGGCAACTCCTGACTAAACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507740.5
CDS-3UTR TCA 90 bp CTTTTCAAACATACTATGTACAGGGCAACAACGGTCACTGGCATAGTGCTAGTTTGTCTTGTGAGCCCATaGGATCGACTTTTCTCCACT +
Preference number: 4 (lower is better)
Translates to: LFKHTMYRATTVTGIVLVCLVSP*DRLFST
Trigger: AGTGGAGAAAAGTCGATCTCATGGGCTCACAAGACA...AACTAGCACTATGCCAGTGACCGTTGTTGCCCTGTACATAGTATGTTTGAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000666250.1
ENST00000668113.1
CDS-3UTR TCA 90 bp ATTACACTCCTCACCTGTAACACCGCTTCATGGCTGTATAGCTCCATTTCTGTGGTGATGCTTCACGCCTaGCCCATTTTTAATAGAATG +
Preference number: 4 (lower is better)
Translates to: ITLLTCNTASWLYSSISVVMLHA*PIFNRM
Trigger: CATTCTATTAAAAATGGGTCAGGCGTGAAGCATCAC...CACAGAAATGGAGCTATACAGCCATGAAGCGGTGTTACAGGTGAGGAGTGTAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000666250.1
ENST00000668113.1
CDS-3UTR TCA 90 bp ACTGGAATTCCCTTTACTTTTCAAACATACTATGTACAGGGCAACAACGGTCACTTCCAGTCTGGGATCTaGTCCGGCTACCTGTTTGTA +
Preference number: 4 (lower is better)
Translates to: TGIPFTFQTYYVQGNNGHFQSGI*SGYLFV
Trigger: TACAAACAGGTAGCCGGATCAGATCCCAGACTGGAA...GTGACCGTTGTTGCCCTGTACATAGTATGTTTGAAAAGTAAAGGGAATTCCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000666250.1
CDS-3UTR TCA 90 bp CTTTTCAAACATACTATGTACAGGGCAACAACGGTCACTGGCATAGTGCTAGTTATCCTGGAGATTAAGTaGCCTGAGTCAGGGCATATG +
Preference number: 4 (lower is better)
Translates to: LFKHTMYRATTVTGIVLVILEIK*PESGHM
Trigger: CATATGCCCTGACTCAGGTCACTTAATCTCCAGGAT...AACTAGCACTATGCCAGTGACCGTTGTTGCCCTGTACATAGTATGTTTGAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507740.5
CDS-3UTR GCA 90 bp ATTACACTCCTCACCTGTAACACCGCTTCATGGCTGTATAGCTCCATTTCTGTGAAAGAAACATCACTATaGCTTCTCTCATGCCGTGCT +
Preference number: 4 (lower is better)
Translates to: ITLLTCNTASWLYSSISVKETSL*LLSCRA
Trigger: AGCACGGCATGAGAGAAGGCATAGTGATGTTTCTTT...CACAGAAATGGAGCTATACAGCCATGAAGCGGTGTTACAGGTGAGGAGTGTAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR GCA 90 bp AGAAACAGGCTCAGAAGACACAACATTAAGCATGCAGTGTTACCAGGGTTTGCACTAGGATCTAAGTGGTaGTGTTTCCGTAGTGAGTCA +
Preference number: 4 (lower is better)
Translates to: RNRLRRHNIKHAVLPGFALGSKW*CFRSES
Trigger: TGACTCACTACGGAAACAGCACCACTTAGATCCTAG...TGCAAACCCTGGTAACACTGCATGCTTAATGTTGTGTCTTCTGAGCCTGTTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR GCA 90 bp ATTACACTCCTCACCTGTAACACCGCTTCATGGCTGTATAGCTCCATTTCTGTGAGAGTCCGACAAAACTaGCTGCTCACTAGTTTTTCT +
Preference number: 4 (lower is better)
Translates to: ITLLTCNTASWLYSSISVRVRQN*LLTSFS
Trigger: AGAAAAACTAGTGAGCAGGCAGTTTTGTCGGACTCT...CACAGAAATGGAGCTATACAGCCATGAAGCGGTGTTACAGGTGAGGAGTGTAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000668113.1
CDS-3UTR GCA 90 bp ATTACACTCCTCACCTGTAACACCGCTTCATGGCTGTATAGCTCCATTTCTGTGTCAAATGTGGCTCCTTaGAGTAGTCTTCCATTCCAT +
Preference number: 4 (lower is better)
Translates to: ITLLTCNTASWLYSSISVSNVAP*SSLPFH
Trigger: ATGGAATGGAAGACTACTGCAAGGAGCCACATTTGA...CACAGAAATGGAGCTATACAGCCATGAAGCGGTGTTACAGGTGAGGAGTGTAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR GCA 90 bp CTAAGACCAGCAGTCCACTTATGTTATCGAGAAGTAGGAGACGGTGATTTCATTCCAGTTGTGCATGTGTaGTATCAGGTATTCGCGGTA +
Preference number: 4 (lower is better)
Translates to: LRPAVHLCYREVGDGDFIPVVHV*YQVFAV
Trigger: TACCGCGAATACCTGATAGCACACATGCACAACTGG...AATGAAATCACCGTCTCCTACTTCTCGATAACATAAGTGGACTGCTGGTCTTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507740.5
CDS-3UTR GCA 90 bp CTTTTCAAACATACTATGTACAGGGCAACAACGGTCACTGGCATAGTGCTAGTTCCAGTTGTGCATGTGTaGTATCAGGTATTCGCGGTA +
Preference number: 4 (lower is better)
Translates to: LFKHTMYRATTVTGIVLVPVVHV*YQVFAV
Trigger: TACCGCGAATACCTGATAGCACACATGCACAACTGG...AACTAGCACTATGCCAGTGACCGTTGTTGCCCTGTACATAGTATGTTTGAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR GCA 90 bp AGAAACAGGCTCAGAAGACACAACATTAAGCATGCAGTGTTACCAGGGTTTGCAACTGGACTCCAGTTGTaGATGTGTGCTATCAGGTAT +
Preference number: 4 (lower is better)
Translates to: RNRLRRHNIKHAVLPGFATGLQL*MCAIRY
Trigger: ATACCTGATAGCACACATGCACAACTGGAGTCCAGT...TGCAAACCCTGGTAACACTGCATGCTTAATGTTGTGTCTTCTGAGCCTGTTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR GCA 90 bp GTTCTTTTAACAACTTTACCTGGGTCCATCAGAATGTCAAGACACAGTCTTGGTTGTAGACTCTCGGCTTaGCTGTCGAGTCATCCAGTT +
Preference number: 4 (lower is better)
Translates to: VLLTTLPGSIRMSRHSLGCRLSA*LSSHPV
Trigger: AACTGGATGACTCGACAGGCAAGCCGAGAGTCTACA...ACCAAGACTGTGTCTTGACATTCTGATGGACCCAGGTAAAGTTGTTAAAAGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR GCA 90 bp TCCCAACTGGAATTCCCTTTACTTTTCAAACATACTATGTACAGGGCAACAACGTGTAGACTCTCGGCTTaGCTGTCGAGTCATCCAGTT +
Preference number: 4 (lower is better)
Translates to: SQLEFPLLFKHTMYRATTCRLSA*LSSHPV
Trigger: AACTGGATGACTCGACAGGCAAGCCGAGAGTCTACA...CGTTGTTGCCCTGTACATAGTATGTTTGAAAAGTAAAGGGAATTCCAGTTGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR GCA 90 bp AGCCACAGAATTTTGTTTTTCAGAGTCCAACACATCTTAGCATTAGTAATTGACACCCATTGCAGGTGTTaGCAGAGTCTGGCGTCCCAC +
Preference number: 4 (lower is better)
Translates to: SHRILFFRVQHILALVIDTHCRC*QSLASH
Trigger: GTGGGACGCCAGACTCTGGCAACACCTGCAATGGGT...GTCAATTACTAATGCTAAGATGTGTTGGACTCTGAAAAACAAAATTCTGTGGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR GCA 90 bp AGAAACAGGCTCAGAAGACACAACATTAAGCATGCAGTGTTACCAGGGTTTGCAACTTCTTTGGTCTCCTaGTTTTCACCTGATGCTTCC +
Preference number: 4 (lower is better)
Translates to: RNRLRRHNIKHAVLPGFATSLVS*FSPDAS
Trigger: GGAAGCATCAGGTGAAAAGCAGGAGACCAAAGAAGT...TGCAAACCCTGGTAACACTGCATGCTTAATGTTGTGTCTTCTGAGCCTGTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR GCA 90 bp AGCCACAGAATTTTGTTTTTCAGAGTCCAACACATCTTAGCATTAGTAATTGACTCCTGCTGGACTGACTaGTCTGATTCCCGCCCAGAG +
Preference number: 4 (lower is better)
Translates to: SHRILFFRVQHILALVIDSCWTD*SDSRPE
Trigger: CTCTGGGCGGGAATCAGAGCAGTCAGTCCAGCAGGA...GTCAATTACTAATGCTAAGATGTGTTGGACTCTGAAAAACAAAATTCTGTGGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR GCA 90 bp TCCCAACTGGAATTCCCTTTACTTTTCAAACATACTATGTACAGGGCAACAACGTGGAGCTACAAAGTCTaGCACTCTTCCTGCTGGACT +
Preference number: 4 (lower is better)
Translates to: SQLEFPLLFKHTMYRATTWSYKV*HSSCWT
Trigger: AGTCCAGCAGGAAGAGTGGCAGACTTTGTAGCTCCA...CGTTGTTGCCCTGTACATAGTATGTTTGAAAAGTAAAGGGAATTCCAGTTGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR GCA 90 bp GTTCTTTTAACAACTTTACCTGGGTCCATCAGAATGTCAAGACACAGTCTTGGTCTGCTTCACAATCCCTaGCATCCCTGTGATGATGGT +
Preference number: 4 (lower is better)
Translates to: VLLTTLPGSIRMSRHSLGLLHNP*HPCDDG
Trigger: ACCATCATCACAGGGATGGCAGGGATTGTGAAGCAG...ACCAAGACTGTGTCTTGACATTCTGATGGACCCAGGTAAAGTTGTTAAAAGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507740.5
ENST00000666250.1
CDS-3UTR GCA 90 bp CTAAGACCAGCAGTCCACTTATGTTATCGAGAAGTAGGAGACGGTGATTTCATTATATGGCTGTCTATCTaGTGCTTCACAATCCCTGCC +
Preference number: 4 (lower is better)
Translates to: LRPAVHLCYREVGDGDFIIWLSI*CFTIPA
Trigger: GGCAGGGATTGTGAAGCAGCAGATAGACAGCCATAT...AATGAAATCACCGTCTCCTACTTCTCGATAACATAAGTGGACTGCTGGTCTTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507740.5
CDS-3UTR GCA 90 bp ATTACACTCCTCACCTGTAACACCGCTTCATGGCTGTATAGCTCCATTTCTGTGCATATCCTTTATTGTTaGCTATGGAGCCTTGGCATC +
Preference number: 4 (lower is better)
Translates to: ITLLTCNTASWLYSSISVHILYC*LWSLGI
Trigger: GATGCCAAGGCTCCATAGGCAACAATAAAGGATATG...CACAGAAATGGAGCTATACAGCCATGAAGCGGTGTTACAGGTGAGGAGTGTAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507740.5
CDS-3UTR GCA 90 bp GTTCTTTTAACAACTTTACCTGGGTCCATCAGAATGTCAAGACACAGTCTTGGTTCCTCTTCTTTCTTCTaGCTATCCATGACGGCCAGG +
Preference number: 4 (lower is better)
Translates to: VLLTTLPGSIRMSRHSLGSSSFF*LSMTAR
Trigger: CCTGGCCGTCATGGATAGGCAGAAGAAAGAAGAGGA...ACCAAGACTGTGTCTTGACATTCTGATGGACCCAGGTAAAGTTGTTAAAAGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CCA 90 bp AGAAACAGGCTCAGAAGACACAACATTAAGCATGCAGTGTTACCAGGGTTTGCATTCTTCATAGGGTTGTaGCTTTACTGGATAACGGGC +
Preference number: 4 (lower is better)
Translates to: RNRLRRHNIKHAVLPGFAFFIGL*LYWITG
Trigger: GCCCGTTATCCAGTAAAGCCACAACCCTATGAAGAA...TGCAAACCCTGGTAACACTGCATGCTTAATGTTGTGTCTTCTGAGCCTGTTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CCA 90 bp CTTTTCAAACATACTATGTACAGGGCAACAACGGTCACTGGCATAGTGCTAGTTCGGGACACTTCAGCATaGATCCGCATTTGTTCTTCA +
Preference number: 4 (lower is better)
Translates to: LFKHTMYRATTVTGIVLVRDTSA*IRICSS
Trigger: TGAAGAACAAATGCGGATCCATGCTGAAGTGTCCCG...AACTAGCACTATGCCAGTGACCGTTGTTGCCCTGTACATAGTATGTTTGAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CCA 90 bp ATTACACTCCTCACCTGTAACACCGCTTCATGGCTGTATAGCTCCATTTCTGTGATCGCTGATTTTCCATaGCAGCTCTACGTTCTGATA +
Preference number: 4 (lower is better)
Translates to: ITLLTCNTASWLYSSISVIADFP*QLYVLI
Trigger: TATCAGAACGTAGAGCTGCCATGGAAAATCAGCGAT...CACAGAAATGGAGCTATACAGCCATGAAGCGGTGTTACAGGTGAGGAGTGTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CCA 90 bp CTTTTCAAACATACTATGTACAGGGCAACAACGGTCACTGGCATAGTGCTAGTTCTGCTCAACGAAATCTaGCGCATTTTACCGCCTTTC +
Preference number: 4 (lower is better)
Translates to: LFKHTMYRATTVTGIVLVLLNEI*RILPPF
Trigger: GAAAGGCGGTAAAATGCGCCAGATTTCGTTGAGCAG...AACTAGCACTATGCCAGTGACCGTTGTTGCCCTGTACATAGTATGTTTGAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CCA 90 bp AGAAACAGGCTCAGAAGACACAACATTAAGCATGCAGTGTTACCAGGGTTTGCAATCTCCATCTTTAGATaGTTGCCAGGTTACAGGGTG +
Preference number: 4 (lower is better)
Translates to: RNRLRRHNIKHAVLPGFAISIFR*LPGYRV
Trigger: CACCCTGTAACCTGGCAACCATCTAAAGATGGAGAT...TGCAAACCCTGGTAACACTGCATGCTTAATGTTGTGTCTTCTGAGCCTGTTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CCA 90 bp AGAAACAGGCTCAGAAGACACAACATTAAGCATGCAGTGTTACCAGGGTTTGCAACACTTCCTCAAATGTaGCTCCTTGCAGTAGTCTTC +
Preference number: 4 (lower is better)
Translates to: RNRLRRHNIKHAVLPGFATLPQM*LLAVVF
Trigger: GAAGACTACTGCAAGGAGCCACATTTGAGGAAGTGT...TGCAAACCCTGGTAACACTGCATGCTTAATGTTGTGTCTTCTGAGCCTGTTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CCA 90 bp CTTTTCAAACATACTATGTACAGGGCAACAACGGTCACTGGCATAGTGCTAGTTAACATAAGGATTCCTTaGCCTCCCATCTTCCCTGGA +
Preference number: 4 (lower is better)
Translates to: LFKHTMYRATTVTGIVLVNIRIP*PPIFPG
Trigger: TCCAGGGAAGATGGGAGGCCAAGGAATCCTTATGTT...AACTAGCACTATGCCAGTGACCGTTGTTGCCCTGTACATAGTATGTTTGAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CCA 90 bp ACTGGAATTCCCTTTACTTTTCAAACATACTATGTACAGGGCAACAACGGTCACTCTTCGTGGCATATATaGAGAAGGGTGGGGAAGTGG +
Preference number: 4 (lower is better)
Translates to: TGIPFTFQTYYVQGNNGHSSWHI*RRVGKW
Trigger: CCACTTCCCCACCCTTCTCCATATATGCCACGAAGA...GTGACCGTTGTTGCCCTGTACATAGTATGTTTGAAAAGTAAAGGGAATTCCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CCA 90 bp GTTCTTTTAACAACTTTACCTGGGTCCATCAGAATGTCAAGACACAGTCTTGGTTCTTCGTGGCATATATaGAGAAGGGTGGGGAAGTGG +
Preference number: 4 (lower is better)
Translates to: VLLTTLPGSIRMSRHSLGSSWHI*RRVGKW
Trigger: CCACTTCCCCACCCTTCTCCATATATGCCACGAAGA...ACCAAGACTGTGTCTTGACATTCTGATGGACCCAGGTAAAGTTGTTAAAAGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CCA 90 bp GGTGGGACTTTGTCTTATAATCATATGAGCCAATTCTCCCTAATAAACTCCCTTGTTGGGCTCTCTCCATaGAGCTGTCTTCGTGGCATA +
Preference number: 4 (lower is better)
Translates to: GGTLSYNHMSQFSLINSLVGLSP*SCLRGI
Trigger: TATGCCACGAAGACAGCTCCATGGAGAGAGCCCAAC...AAGGGAGTTTATTAGGGAGAATTGGCTCATATGATTATAAGACAAAGTCCCACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507677.5
CDS-3UTR CCA 90 bp GTTCTTTTAACAACTTTACCTGGGTCCATCAGAATGTCAAGACACAGTCTTGGTATCCAACGTTCCCTTTaGTGGAAGCTGTGGAAGCTG +
Preference number: 4 (lower is better)
Translates to: VLLTTLPGSIRMSRHSLGIQRSL*WKLWKL
Trigger: CAGCTTCCACAGCTTCCACCAAAGGGAACGTTGGAT...ACCAAGACTGTGTCTTGACATTCTGATGGACCCAGGTAAAGTTGTTAAAAGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CCA 90 bp ACTGGAATTCCCTTTACTTTTCAAACATACTATGTACAGGGCAACAACGGTCACATCCAACGTTCCCTTTaGTGGAAGCTGTGGAAGCTG +
Preference number: 4 (lower is better)
Translates to: TGIPFTFQTYYVQGNNGHIQRSL*WKLWKL
Trigger: CAGCTTCCACAGCTTCCACCAAAGGGAACGTTGGAT...GTGACCGTTGTTGCCCTGTACATAGTATGTTTGAAAAGTAAAGGGAATTCCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CCA 90 bp CTTTTCAAACATACTATGTACAGGGCAACAACGGTCACTGGCATAGTGCTAGTTCAGTGTCTTGGAACCTaGTTTTACAACAAGGCCACG +
Preference number: 4 (lower is better)
Translates to: LFKHTMYRATTVTGIVLVQCLGT*FYNKAT
Trigger: CGTGGCCTTGTTGTAAAACCAGGTTCCAAGACACTG...AACTAGCACTATGCCAGTGACCGTTGTTGCCCTGTACATAGTATGTTTGAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CCA 90 bp AGAAACAGGCTCAGAAGACACAACATTAAGCATGCAGTGTTACCAGGGTTTGCAGTGCTGGCAGTGTCTTaGAACCTGGTTTTACAACAA +
Preference number: 4 (lower is better)
Translates to: RNRLRRHNIKHAVLPGFAVLAVS*NLVLQQ
Trigger: TTGTTGTAAAACCAGGTTCCAAGACACTGCCAGCAC...TGCAAACCCTGGTAACACTGCATGCTTAATGTTGTGTCTTCTGAGCCTGTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CCA 90 bp ATTACACTCCTCACCTGTAACACCGCTTCATGGCTGTATAGCTCCATTTCTGTGCTTTCCAGAGATGATTaGGAAGCTCTTCTTGTCAGA +
Preference number: 4 (lower is better)
Translates to: ITLLTCNTASWLYSSISVLSRDD*EALLVR
Trigger: TCTGACAAGAAGAGCTTCCCAATCATCTCTGGAAAG...CACAGAAATGGAGCTATACAGCCATGAAGCGGTGTTACAGGTGAGGAGTGTAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CCA 90 bp AGAAACAGGCTCAGAAGACACAACATTAAGCATGCAGTGTTACCAGGGTTTGCAGCTCTGAATCAAACATaGGGTATGAGAGAGGATCAG +
Preference number: 4 (lower is better)
Translates to: RNRLRRHNIKHAVLPGFAALNQT*GMREDQ
Trigger: CTGATCCTCTCTCATACCCCATGTTTGATTCAGAGC...TGCAAACCCTGGTAACACTGCATGCTTAATGTTGTGTCTTCTGAGCCTGTTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CCA 90 bp ACTGGAATTCCCTTTACTTTTCAAACATACTATGTACAGGGCAACAACGGTCACGGCAGCCTCCAGCGCTaGGACAAATACATACAAATC +
Preference number: 4 (lower is better)
Translates to: TGIPFTFQTYYVQGNNGHGSLQR*DKYIQI
Trigger: GATTTGTATGTATTTGTCCCAGCGCTGGAGGCTGCC...GTGACCGTTGTTGCCCTGTACATAGTATGTTTGAAAAGTAAAGGGAATTCCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000666250.1
ENST00000668113.1
3UTR CAA 72 bp TCCATGGCTTCAGATTGGACCAGAACTCGAGTGTCATaGAATTCCAAATCTGATAGTTCTTCACAGCTCTGC +
Preference number: 4 (lower is better)
Translates to: SMASDWTRTRVS*NSKSDSSSQLC
Trigger: GCAGAGCTGTGAAGAACTATCAGATTTGGAATTCAATGACACTCGAGTTCTGGTCCAATCTGAAGCCATGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
3UTR CAA 72 bp GGGACAGATAGGGGGAATTGGACTCGAGTTGAGTCTTaGGAAATGGAGGAAATGGTTGTTTCCAAGAATAGA +
Preference number: 4 (lower is better)
Translates to: GTDRGNWTRVES*EMEEMVVSKNR
Trigger: TCTATTCTTGGAAACAACCATTTCCTCCATTTCCAAAGACTCAACTCGAGTCCAATTCCCCCTATCTGTCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000507740.5
CDS-3UTR TCA 90 bp ATTACACTCCTCACCTGTAACACCGCTTCATGGCTGTATAGCTCCATTTCTGTGCGAAGTAGCATACTGTaGATATTCCTCTCTTTCTTC +
Preference number: 4 (lower is better)
Translates to: ITLLTCNTASWLYSSISVRSSIL*IFLSFF
Trigger: GAAGAAAGAGAGGAATATTCACAGTATGCTACTTCG...CACAGAAATGGAGCTATACAGCCATGAAGCGGTGTTACAGGTGAGGAGTGTAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR TCA 90 bp CTTTTCAAACATACTATGTACAGGGCAACAACGGTCACTGGCATAGTGCTAGTTCCTATCAGCATAATCTaGTGGAGATCTAGGCATTGC +
Preference number: 4 (lower is better)
Translates to: LFKHTMYRATTVTGIVLVPISII*WRSRHC
Trigger: GCAATGCCTAGATCTCCATCAGATTATGCTGATAGG...AACTAGCACTATGCCAGTGACCGTTGTTGCCCTGTACATAGTATGTTTGAAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR TCA 90 bp ATATGGAGAAATCCTCTCACCCATTCATATCCACACGTAGAAGCTAGTCTCCGGATCTCCAATAGGCCTTaGAACTACAAGTTCTACTTG +
Preference number: 4 (lower is better)
Translates to: IWRNPLTHSYPHVEASLRISNRP*NYKFYL
Trigger: CAAGTAGAACTTGTAGTTTCAAGGCCTATTGGAGAT...CCGGAGACTAGCTTCTACGTGTGGATATGAATGGGTGAGAGGATTTCTCCATAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507740.5
CDS-3UTR TCA 90 bp ATTACACTCCTCACCTGTAACACCGCTTCATGGCTGTATAGCTCCATTTCTGTGGGACTGGAGAATAAATaGATGTTTGGTTCCATTTGG +
Preference number: 4 (lower is better)
Translates to: ITLLTCNTASWLYSSISVGLENK*MFGSIW
Trigger: CCAAATGGAACCAAACATTCATTTATTCTCCAGTCC...CACAGAAATGGAGCTATACAGCCATGAAGCGGTGTTACAGGTGAGGAGTGTAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR TCA 90 bp TCCCAACTGGAATTCCCTTTACTTTTCAAACATACTATGTACAGGGCAACAACGTCTCGAACACGAGCTTaGTCCCAAAGGGTAATCTCT +
Preference number: 4 (lower is better)
Translates to: SQLEFPLLFKHTMYRATTSRTRA*SQRVIS
Trigger: AGAGATTACCCTTTGGGATCAAGCTCGTGTTCGAGA...CGTTGTTGCCCTGTACATAGTATGTTTGAAAAGTAAAGGGAATTCCAGTTGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR TCA 90 bp GTTCTTTTAACAACTTTACCTGGGTCCATCAGAATGTCAAGACACAGTCTTGGTGAGACATCATGCGTCTaGAGTTTGTACCAATGTGGC +
Preference number: 4 (lower is better)
Translates to: VLLTTLPGSIRMSRHSLGETSCV*SLYQCG
Trigger: GCCACATTGGTACAAACTTCAGACGCATGATGTCTC...ACCAAGACTGTGTCTTGACATTCTGATGGACCCAGGTAAAGTTGTTAAAAGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR TCA 90 bp GCTGGTAAAGTATTGTTTCTAGATGTGTCTGTAAGGTGTTGCCAGAGGAGACTGATCACTTATTCTCTTTaGCCTTTGCAACCTCCGTGT +
Preference number: 4 (lower is better)
Translates to: AGKVLFLDVSVRCCQRRLITYSL*PLQPPC
Trigger: ACACGGAGGTTGCAAAGGTCAAAGAGAATAAGTGAT...CAGTCTCCTCTGGCAACACCTTACAGACACATCTAGAAACAATACTTTACCAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507677.5
CDS-3UTR TCA 90 bp ATTACACTCCTCACCTGTAACACCGCTTCATGGCTGTATAGCTCCATTTCTGTGGATAATGTTGAGCTTTaGAGATCTCGACCATCATGT +
Preference number: 4 (lower is better)
Translates to: ITLLTCNTASWLYSSISVDNVEL*RSRPSC
Trigger: ACATGATGGTCGAGATCTTCAAAGCTCAACATTATC...CACAGAAATGGAGCTATACAGCCATGAAGCGGTGTTACAGGTGAGGAGTGTAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR TCA 90 bp CTTTTCAAACATACTATGTACAGGGCAACAACGGTCACTGGCATAGTGCTAGTTGTTGATCTGGATCTGTaGTATGGCTGTCTATCTGCT +
Preference number: 4 (lower is better)
Translates to: LFKHTMYRATTVTGIVLVVDLDL*YGCLSA
Trigger: AGCAGATAGACAGCCATATCACAGATCCAGATCAAC...AACTAGCACTATGCCAGTGACCGTTGTTGCCCTGTACATAGTATGTTTGAAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR TCA 90 bp TCCCAACTGGAATTCCCTTTACTTTTCAAACATACTATGTACAGGGCAACAACGAGGCCGTTGTTCTGTTaGTCTGGATCTGTGATATGG +
Preference number: 4 (lower is better)
Translates to: SQLEFPLLFKHTMYRATTRPLFC*SGSVIW
Trigger: CCATATCACAGATCCAGATCAACAGAACAACGGCCT...CGTTGTTGCCCTGTACATAGTATGTTTGAAAAGTAAAGGGAATTCCAGTTGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR TCA 90 bp GTTCTTTTAACAACTTTACCTGGGTCCATCAGAATGTCAAGACACAGTCTTGGTTCCATCATTCCTACCTaGATGTCACCCATTGCAGGT +
Preference number: 4 (lower is better)
Translates to: VLLTTLPGSIRMSRHSLGSIIPT*MSPIAG
Trigger: ACCTGCAATGGGTGACATTCAGGTAGGAATGATGGA...ACCAAGACTGTGTCTTGACATTCTGATGGACCCAGGTAAAGTTGTTAAAAGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR TCA 90 bp TCCCAACTGGAATTCCCTTTACTTTTCAAACATACTATGTACAGGGCAACAACGGTGTGCAACTTCCTCTaGGAACACAGGATTGCTTTG +
Preference number: 4 (lower is better)
Translates to: SQLEFPLLFKHTMYRATTVCNFL*EHRIAL
Trigger: CAAAGCAATCCTGTGTTCTCAGAGGAAGTTGCACAC...CGTTGTTGCCCTGTACATAGTATGTTTGAAAAGTAAAGGGAATTCCAGTTGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR TCA 90 bp TCCCAACTGGAATTCCCTTTACTTTTCAAACATACTATGTACAGGGCAACAACGGCTGATGATTGTTCCTaGCCACTTCTTTGGTCTCCT +
Preference number: 4 (lower is better)
Translates to: SQLEFPLLFKHTMYRATTADDCS*PLLWSP
Trigger: AGGAGACCAAAGAAGTGGTCAGGAACAATCATCAGC...CGTTGTTGCCCTGTACATAGTATGTTTGAAAAGTAAAGGGAATTCCAGTTGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR TCA 90 bp ATTACACTCCTCACCTGTAACACCGCTTCATGGCTGTATAGCTCCATTTCTGTGGCACAAAAGATTATGTaGCTGCATCTTAGTATCAGG +
Preference number: 4 (lower is better)
Translates to: ITLLTCNTASWLYSSISVAQKIM*LHLSIR
Trigger: CCTGATACTAAGATGCAGTCACATAATCTTTTGTGC...CACAGAAATGGAGCTATACAGCCATGAAGCGGTGTTACAGGTGAGGAGTGTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR TCA 90 bp GTTCTTTTAACAACTTTACCTGGGTCCATCAGAATGTCAAGACACAGTCTTGGTCCTCGAAGAACCTTTTaGTCAGGTTGCTGTGGTGTA +
Preference number: 4 (lower is better)
Translates to: VLLTTLPGSIRMSRHSLGPRRTF*SGCCGV
Trigger: TACACCACAGCAACCTGATCAAAAGGTTCTTCGAGG...ACCAAGACTGTGTCTTGACATTCTGATGGACCCAGGTAAAGTTGTTAAAAGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000666250.1
ENST00000668113.1
CDS-3UTR TCA 90 bp ACTGGAATTCCCTTTACTTTTCAAACATACTATGTACAGGGCAACAACGGTCACCCTCGAAGAACCTTTTaGTCAGGTTGCTGTGGTGTA +
Preference number: 4 (lower is better)
Translates to: TGIPFTFQTYYVQGNNGHPRRTF*SGCCGV
Trigger: TACACCACAGCAACCTGATCAAAAGGTTCTTCGAGG...GTGACCGTTGTTGCCCTGTACATAGTATGTTTGAAAAGTAAAGGGAATTCCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000666250.1
ENST00000668113.1
CDS-3UTR TCA 90 bp TCCCAACTGGAATTCCCTTTACTTTTCAAACATACTATGTACAGGGCAACAACGATACGGTCTCTGCCCTaGAGGAGCTTACGTTTTAGT +
Preference number: 4 (lower is better)
Translates to: SQLEFPLLFKHTMYRATTIRSLP*RSLRFS
Trigger: ACTAAAACGTAAGCTCCTTCAGGGCAGAGACCGTAT...CGTTGTTGCCCTGTACATAGTATGTTTGAAAAGTAAAGGGAATTCCAGTTGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507740.5
CDS-3UTR TCA 90 bp AGAAACAGGCTCAGAAGACACAACATTAAGCATGCAGTGTTACCAGGGTTTGCATTCTTGCTGTTGCTGTaGTTCTTCTCCCATCTTCTT +
Preference number: 4 (lower is better)
Translates to: RNRLRRHNIKHAVLPGFAFLLLL*FFSHLL
Trigger: AAGAAGATGGGAGAAGAATCACAGCAACAGCAAGAA...TGCAAACCCTGGTAACACTGCATGCTTAATGTTGTGTCTTCTGAGCCTGTTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000666250.1
ENST00000668113.1
CDS-3UTR TCA 90 bp AGAAACAGGCTCAGAAGACACAACATTAAGCATGCAGTGTTACCAGGGTTTGCATGTTTTTGCTGGGGCTaGAGAACGTTATTTACCAGT +
Preference number: 4 (lower is better)
Translates to: RNRLRRHNIKHAVLPGFACFCWG*RTLFTS
Trigger: ACTGGTAAATAACGTTCTTCAGCCCCAGCAAAAACA...TGCAAACCCTGGTAACACTGCATGCTTAATGTTGTGTCTTCTGAGCCTGTTTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000668113.1
CDS-3UTR GCA 90 bp CTTTTCAAACATACTATGTACAGGGCAACAACGGTCACTGGCATAGTGCTAGTTTGGAGATCTAGGCATTaGGGTATCCGAAGTAGCATA +
Preference number: 4 (lower is better)
Translates to: LFKHTMYRATTVTGIVLVWRSRH*GIRSSI
Trigger: TATGCTACTTCGGATACCGCAATGCCTAGATCTCCA...AACTAGCACTATGCCAGTGACCGTTGTTGCCCTGTACATAGTATGTTTGAAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR GCA 90 bp AGAAACAGGCTCAGAAGACACAACATTAAGCATGCAGTGTTACCAGGGTTTGCATCTTCCTCTCTCCTTTaGCTTTCGTATTCATCTCTG +
Preference number: 4 (lower is better)
Translates to: RNRLRRHNIKHAVLPGFASSSLL*LSYSSL
Trigger: CAGAGATGAATACGAAAGGCAAAGGAGAGAGGAAGA...TGCAAACCCTGGTAACACTGCATGCTTAATGTTGTGTCTTCTGAGCCTGTTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR GCA 90 bp TCCCAACTGGAATTCCCTTTACTTTTCAAACATACTATGTACAGGGCAACAACGATTCCTCCTCTGAACTaGTCAACGAAATCTGGCGCA +
Preference number: 4 (lower is better)
Translates to: SQLEFPLLFKHTMYRATTIPPLN*STKSGA
Trigger: TGCGCCAGATTTCGTTGAGCAGTTCAGAGGAGGAAT...CGTTGTTGCCCTGTACATAGTATGTTTGAAAAGTAAAGGGAATTCCAGTTGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR GCA 90 bp GCTGGTAAAGTATTGTTTCTAGATGTGTCTGTAAGGTGTTGCCAGAGGAGACTGTCAAATGTGGCTCCTTaGAGTAGTCTTCCATTCCAT +
Preference number: 4 (lower is better)
Translates to: AGKVLFLDVSVRCCQRRLSNVAP*SSLPFH
Trigger: ATGGAATGGAAGACTACTGCAAGGAGCCACATTTGA...CAGTCTCCTCTGGCAACACCTTACAGACACATCTAGAAACAATACTTTACCAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507677.5
CDS-3UTR GCA 90 bp GTTCTTTTAACAACTTTACCTGGGTCCATCAGAATGTCAAGACACAGTCTTGGTCCAGTTGTGCATGTGTaGTATCAGGTATTCGCGGTA +
Preference number: 4 (lower is better)
Translates to: VLLTTLPGSIRMSRHSLGPVVHV*YQVFAV
Trigger: TACCGCGAATACCTGATAGCACACATGCACAACTGG...ACCAAGACTGTGTCTTGACATTCTGATGGACCCAGGTAAAGTTGTTAAAAGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CCA 90 bp ATTACACTCCTCACCTGTAACACCGCTTCATGGCTGTATAGCTCCATTTCTGTGTTCTATTCTGATCTCTaGACACAGATGGGCTTCTTT +
Preference number: 4 (lower is better)
Translates to: ITLLTCNTASWLYSSISVFYSDL*TQMGFF
Trigger: AAAGAAGCCCATCTGTGTCCAGAGATCAGAATAGAA...CACAGAAATGGAGCTATACAGCCATGAAGCGGTGTTACAGGTGAGGAGTGTAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CCA 90 bp CTTTTCAAACATACTATGTACAGGGCAACAACGGTCACTGGCATAGTGCTAGTTTTCTTCATAGGGTTGTaGCTTTACTGGATAACGGGC +
Preference number: 4 (lower is better)
Translates to: LFKHTMYRATTVTGIVLVFFIGL*LYWITG
Trigger: GCCCGTTATCCAGTAAAGCCACAACCCTATGAAGAA...AACTAGCACTATGCCAGTGACCGTTGTTGCCCTGTACATAGTATGTTTGAAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CCA 90 bp GTTCTTTTAACAACTTTACCTGGGTCCATCAGAATGTCAAGACACAGTCTTGGTCGGGACACTTCAGCATaGATCCGCATTTGTTCTTCA +
Preference number: 4 (lower is better)
Translates to: VLLTTLPGSIRMSRHSLGRDTSA*IRICSS
Trigger: TGAAGAACAAATGCGGATCCATGCTGAAGTGTCCCG...ACCAAGACTGTGTCTTGACATTCTGATGGACCCAGGTAAAGTTGTTAAAAGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CCA 90 bp GTTCTTTTAACAACTTTACCTGGGTCCATCAGAATGTCAAGACACAGTCTTGGTGAGCTAGGATCTAAGTaGTGCTGTTTCCGTAGTGAG +
Preference number: 4 (lower is better)
Translates to: VLLTTLPGSIRMSRHSLGELGSK*CCFRSE
Trigger: CTCACTACGGAAACAGCACCACTTAGATCCTAGCTC...ACCAAGACTGTGTCTTGACATTCTGATGGACCCAGGTAAAGTTGTTAAAAGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CCA 90 bp ACTGGAATTCCCTTTACTTTTCAAACATACTATGTACAGGGCAACAACGGTCACGAGCTAGGATCTAAGTaGTGCTGTTTCCGTAGTGAG +
Preference number: 4 (lower is better)
Translates to: TGIPFTFQTYYVQGNNGHELGSK*CCFRSE
Trigger: CTCACTACGGAAACAGCACCACTTAGATCCTAGCTC...GTGACCGTTGTTGCCCTGTACATAGTATGTTTGAAAAGTAAAGGGAATTCCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CCA 90 bp CTTTTCAAACATACTATGTACAGGGCAACAACGGTCACTGGCATAGTGCTAGTTCTCACTGACTCTGACTaGTCTGAACTGAGAGAATCA +
Preference number: 4 (lower is better)
Translates to: LFKHTMYRATTVTGIVLVLTDSD*SELRES
Trigger: TGATTCTCTCAGTTCAGACCAGTCAGAGTCAGTGAG...AACTAGCACTATGCCAGTGACCGTTGTTGCCCTGTACATAGTATGTTTGAAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CCA 90 bp TCCCAACTGGAATTCCCTTTACTTTTCAAACATACTATGTACAGGGCAACAACGCTGCTCAACGAAATCTaGCGCATTTTACCGCCTTTC +
Preference number: 4 (lower is better)
Translates to: SQLEFPLLFKHTMYRATTLLNEI*RILPPF
Trigger: GAAAGGCGGTAAAATGCGCCAGATTTCGTTGAGCAG...CGTTGTTGCCCTGTACATAGTATGTTTGAAAAGTAAAGGGAATTCCAGTTGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CCA 90 bp ACTGGAATTCCCTTTACTTTTCAAACATACTATGTACAGGGCAACAACGGTCACCTGCTCAACGAAATCTaGCGCATTTTACCGCCTTTC +
Preference number: 4 (lower is better)
Translates to: TGIPFTFQTYYVQGNNGHLLNEI*RILPPF
Trigger: GAAAGGCGGTAAAATGCGCCAGATTTCGTTGAGCAG...GTGACCGTTGTTGCCCTGTACATAGTATGTTTGAAAAGTAAAGGGAATTCCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CCA 90 bp ACTGGAATTCCCTTTACTTTTCAAACATACTATGTACAGGGCAACAACGGTCACGGGTGCTTATCACTATaGCTATGCTCCTCGTTAAGG +
Preference number: 4 (lower is better)
Translates to: TGIPFTFQTYYVQGNNGHGCLSL*LCSSLR
Trigger: CCTTAACGAGGAGCATAGCCATAGTGATAAGCACCC...GTGACCGTTGTTGCCCTGTACATAGTATGTTTGAAAAGTAAAGGGAATTCCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000668113.1
CDS-3UTR CCA 90 bp AAGTTTTCTGGCTTCTTTCTTTTTCCTGTGCTGGATGATTCCTTTCACTCTTCCAACATAAGGATTCCTTaGCCTCCCATCTTCCCTGGA +
Preference number: 4 (lower is better)
Translates to: KFSGFFLFPVLDDSFHSSNIRIP*PPIFPG
Trigger: TCCAGGGAAGATGGGAGGCCAAGGAATCCTTATGTT...GGAAGAGTGAAAGGAATCATCCAGCACAGGAAAAAGAAAGAAGCCAGAAAACTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000507677.5
CDS-3UTR CCA 90 bp TCCCAACTGGAATTCCCTTTACTTTTCAAACATACTATGTACAGGGCAACAACGATGGAGCTGTCTTCGTaGCATATATGGAGAAGGGTG +
Preference number: 4 (lower is better)
Translates to: SQLEFPLLFKHTMYRATTMELSS*HIWRRV
Trigger: CACCCTTCTCCATATATGCCACGAAGACAGCTCCAT...CGTTGTTGCCCTGTACATAGTATGTTTGAAAAGTAAAGGGAATTCCAGTTGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CCA 90 bp ATTACACTCCTCACCTGTAACACCGCTTCATGGCTGTATAGCTCCATTTCTGTGATCCCTGTCTCTATCTaGAGAATAATGGTCATCCAT +
Preference number: 4 (lower is better)
Translates to: ITLLTCNTASWLYSSISVIPVSI*RIMVIH
Trigger: ATGGATGACCATTATTCTCCAGATAGAGACAGGGAT...CACAGAAATGGAGCTATACAGCCATGAAGCGGTGTTACAGGTGAGGAGTGTAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000668113.1
CDS-3UTR CCA 90 bp AGAAACAGGCTCAGAAGACACAACATTAAGCATGCAGTGTTACCAGGGTTTGCAGTTGTTCTGTTGATCTaGATCTGTGATATGGCTGTC +
Preference number: 4 (lower is better)
Translates to: RNRLRRHNIKHAVLPGFAVVLLI*ICDMAV
Trigger: GACAGCCATATCACAGATCCAGATCAACAGAACAAC...TGCAAACCCTGGTAACACTGCATGCTTAATGTTGTGTCTTCTGAGCCTGTTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CCA 90 bp AGCCACAGAATTTTGTTTTTCAGAGTCCAACACATCTTAGCATTAGTAATTGACTATCAGGACGTTCAGTaGATCTGGAGCGGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: SHRILFFRVQHILALVIDYQDVQ*IWSGWW
Trigger: CCACCACCCGCTCCAGATCCACTGAACGTCCTGATA...GTCAATTACTAATGCTAAGATGTGTTGGACTCTGAAAAACAAAATTCTGTGGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CCA 90 bp TCCCAACTGGAATTCCCTTTACTTTTCAAACATACTATGTACAGGGCAACAACGAGGAAATCACTGAACTaGCTATCAGAGGCCAAGCGA +
Preference number: 4 (lower is better)
Translates to: SQLEFPLLFKHTMYRATTRKSLN*LSEAKR
Trigger: TCGCTTGGCCTCTGATAGCCAGTTCAGTGATTTCCT...CGTTGTTGCCCTGTACATAGTATGTTTGAAAAGTAAAGGGAATTCCAGTTGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CCA 90 bp ACTGGAATTCCCTTTACTTTTCAAACATACTATGTACAGGGCAACAACGGTCACAGGAAATCACTGAACTaGCTATCAGAGGCCAAGCGA +
Preference number: 4 (lower is better)
Translates to: TGIPFTFQTYYVQGNNGHRKSLN*LSEAKR
Trigger: TCGCTTGGCCTCTGATAGCCAGTTCAGTGATTTCCT...GTGACCGTTGTTGCCCTGTACATAGTATGTTTGAAAAGTAAAGGGAATTCCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CCA 90 bp GTTCTTTTAACAACTTTACCTGGGTCCATCAGAATGTCAAGACACAGTCTTGGTCAGTGTCTTGGAACCTaGTTTTACAACAAGGCCACG +
Preference number: 4 (lower is better)
Translates to: VLLTTLPGSIRMSRHSLGQCLGT*FYNKAT
Trigger: CGTGGCCTTGTTGTAAAACCAGGTTCCAAGACACTG...ACCAAGACTGTGTCTTGACATTCTGATGGACCCAGGTAAAGTTGTTAAAAGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CCA 90 bp ACTGGAATTCCCTTTACTTTTCAAACATACTATGTACAGGGCAACAACGGTCACCAGTGTCTTGGAACCTaGTTTTACAACAAGGCCACG +
Preference number: 4 (lower is better)
Translates to: TGIPFTFQTYYVQGNNGHQCLGT*FYNKAT
Trigger: CGTGGCCTTGTTGTAAAACCAGGTTCCAAGACACTG...GTGACCGTTGTTGCCCTGTACATAGTATGTTTGAAAAGTAAAGGGAATTCCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CCA 90 bp CTTTTCAAACATACTATGTACAGGGCAACAACGGTCACTGGCATAGTGCTAGTTGTGCTGGCAGTGTCTTaGAACCTGGTTTTACAACAA +
Preference number: 4 (lower is better)
Translates to: LFKHTMYRATTVTGIVLVVLAVS*NLVLQQ
Trigger: TTGTTGTAAAACCAGGTTCCAAGACACTGCCAGCAC...AACTAGCACTATGCCAGTGACCGTTGTTGCCCTGTACATAGTATGTTTGAAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CCA 90 bp GTTCTTTTAACAACTTTACCTGGGTCCATCAGAATGTCAAGACACAGTCTTGGTTTTTACATACGGTGCTaGCAGTGTCTTGGAACCTGG +
Preference number: 4 (lower is better)
Translates to: VLLTTLPGSIRMSRHSLGFYIRC*QCLGTW
Trigger: CCAGGTTCCAAGACACTGCCAGCACCGTATGTAAAA...ACCAAGACTGTGTCTTGACATTCTGATGGACCCAGGTAAAGTTGTTAAAAGAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CCA 90 bp ACTGGAATTCCCTTTACTTTTCAAACATACTATGTACAGGGCAACAACGGTCACATAGCTCCATTTCTGTaGCATATCAGGGCTTTGGGG +
Preference number: 4 (lower is better)
Translates to: TGIPFTFQTYYVQGNNGHIAPFL*HIRALG
Trigger: CCCCAAAGCCCTGATATGCCACAGAAATGGAGCTAT...GTGACCGTTGTTGCCCTGTACATAGTATGTTTGAAAAGTAAAGGGAATTCCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CCA 90 bp ACTGGAATTCCCTTTACTTTTCAAACATACTATGTACAGGGCAACAACGGTCACGGCAACAACGGTCACTaGCATAGTGCTAGTTACATG +
Preference number: 4 (lower is better)
Translates to: TGIPFTFQTYYVQGNNGHGNNGH*HSASYM
Trigger: CATGTAACTAGCACTATGCCAGTGACCGTTGTTGCC...GTGACCGTTGTTGCCCTGTACATAGTATGTTTGAAAAGTAAAGGGAATTCCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CCA 90 bp ACTGGAATTCCCTTTACTTTTCAAACATACTATGTACAGGGCAACAACGGTCACGAGGGTCCTTGGAACTaGGTCTGCTCATGTAGTTTT +
Preference number: 4 (lower is better)
Translates to: TGIPFTFQTYYVQGNNGHEGPWN*VCSCSF
Trigger: AAAACTACATGAGCAGACCCAGTTCCAAGGACCCTC...GTGACCGTTGTTGCCCTGTACATAGTATGTTTGAAAAGTAAAGGGAATTCCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CCA 90 bp TGCTGGATGATTCCTTTCACTCTTCCTGCCCTTGGACATCCAACACTAGGTTCTTTAAGCCTTTCAAAATaGACTCACACTTGGACTAAG +
Preference number: 4 (lower is better)
Translates to: CWMIPFTLPALGHPTLGSLSLSK*THTWTK
Trigger: CTTAGTCCAAGTGTGAGTCCATTTTGAAAGGCTTAA...AGAACCTAGTGTTGGATGTCCAAGGGCAGGAAGAGTGAAAGGAATCATCCAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507677.5
CDS-3UTR CCA 90 bp ATTACACTCCTCACCTGTAACACCGCTTCATGGCTGTATAGCTCCATTTCTGTGTATGGAAGATGTGTGTaGCACAGACTTGTTGTTTGT +
Preference number: 4 (lower is better)
Translates to: ITLLTCNTASWLYSSISVYGRCV*HRLVVC
Trigger: ACAAACAACAAGTCTGTGCCACACACATCTTCCATA...CACAGAAATGGAGCTATACAGCCATGAAGCGGTGTTACAGGTGAGGAGTGTAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507740.5
CDS-3UTR TCA 90 bp GTTCTTTTAACAACTTTACCTGGGTCCATCAGAATGTCAAGACACAGTCTTGGTTCGTATCTTCTATTCTaGTCTCTGGACACAGATGGG +
Preference number: 4 (lower is better)
Translates to: VLLTTLPGSIRMSRHSLGSYLLF*SLDTDG
Trigger: CCCATCTGTGTCCAGAGATCAGAATAGAAGATACGA...ACCAAGACTGTGTCTTGACATTCTGATGGACCCAGGTAAAGTTGTTAAAAGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR TCA 90 bp AGAAACAGGCTCAGAAGACACAACATTAAGCATGCAGTGTTACCAGGGTTTGCACGAAGTAGCATACTGTaGATATTCCTCTCTTTCTTC +
Preference number: 4 (lower is better)
Translates to: RNRLRRHNIKHAVLPGFARSSIL*IFLSFF
Trigger: GAAGAAAGAGAGGAATATTCACAGTATGCTACTTCG...TGCAAACCCTGGTAACACTGCATGCTTAATGTTGTGTCTTCTGAGCCTGTTTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR TCA 90 bp GTTCTTTTAACAACTTTACCTGGGTCCATCAGAATGTCAAGACACAGTCTTGGTCCAGAGTCCTTAATCTaGGGTTCAGACCATTCCAAA +
Preference number: 4 (lower is better)
Translates to: VLLTTLPGSIRMSRHSLGPESLI*GSDHSK
Trigger: TTTGGAATGGTCTGAACCTCAGATTAAGGACTCTGG...ACCAAGACTGTGTCTTGACATTCTGATGGACCCAGGTAAAGTTGTTAAAAGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000668113.1
CDS-3UTR TCA 90 bp AGAAACAGGCTCAGAAGACACAACATTAAGCATGCAGTGTTACCAGGGTTTGCAATCTCCAATAGGCCTTaGAACTACAAGTTCTACTTG +
Preference number: 4 (lower is better)
Translates to: RNRLRRHNIKHAVLPGFAISNRP*NYKFYL
Trigger: CAAGTAGAACTTGTAGTTTCAAGGCCTATTGGAGAT...TGCAAACCCTGGTAACACTGCATGCTTAATGTTGTGTCTTCTGAGCCTGTTTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR TCA 90 bp AGAAACAGGCTCAGAAGACACAACATTAAGCATGCAGTGTTACCAGGGTTTGCAGGACTGGAGAATAAATaGATGTTTGGTTCCATTTGG +
Preference number: 4 (lower is better)
Translates to: RNRLRRHNIKHAVLPGFAGLENK*MFGSIW
Trigger: CCAAATGGAACCAAACATTCATTTATTCTCCAGTCC...TGCAAACCCTGGTAACACTGCATGCTTAATGTTGTGTCTTCTGAGCCTGTTTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR TCA 90 bp AGAAACAGGCTCAGAAGACACAACATTAAGCATGCAGTGTTACCAGGGTTTGCAGATAATGTTGAGCTTTaGAGATCTCGACCATCATGT +
Preference number: 4 (lower is better)
Translates to: RNRLRRHNIKHAVLPGFADNVEL*RSRPSC
Trigger: ACATGATGGTCGAGATCTTCAAAGCTCAACATTATC...TGCAAACCCTGGTAACACTGCATGCTTAATGTTGTGTCTTCTGAGCCTGTTTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR TCA 90 bp GTTCTTTTAACAACTTTACCTGGGTCCATCAGAATGTCAAGACACAGTCTTGGTATAACATCTACTCGATaGGGAGACCCTGATGGTGAA +
Preference number: 4 (lower is better)
Translates to: VLLTTLPGSIRMSRHSLGITSTR*GDPDGE
Trigger: TTCACCATCAGGGTCTCCTCATCGAGTAGATGTTAT...ACCAAGACTGTGTCTTGACATTCTGATGGACCCAGGTAAAGTTGTTAAAAGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR TCA 90 bp CTTTTCAAACATACTATGTACAGGGCAACAACGGTCACTGGCATAGTGCTAGTTAATAATGGTCATCCATaGCACGATGTCTGTCCATTC +
Preference number: 4 (lower is better)
Translates to: LFKHTMYRATTVTGIVLVNNGHP*HDVCPF
Trigger: GAATGGACAGACATCGTGTCATGGATGACCATTATT...AACTAGCACTATGCCAGTGACCGTTGTTGCCCTGTACATAGTATGTTTGAAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR TCA 90 bp TCCCAACTGGAATTCCCTTTACTTTTCAAACATACTATGTACAGGGCAACAACGGTTGATCTGGATCTGTaGTATGGCTGTCTATCTGCT +
Preference number: 4 (lower is better)
Translates to: SQLEFPLLFKHTMYRATTVDLDL*YGCLSA
Trigger: AGCAGATAGACAGCCATATCACAGATCCAGATCAAC...CGTTGTTGCCCTGTACATAGTATGTTTGAAAAGTAAAGGGAATTCCAGTTGGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR TCA 90 bp ACTGGAATTCCCTTTACTTTTCAAACATACTATGTACAGGGCAACAACGGTCACGTTGATCTGGATCTGTaGTATGGCTGTCTATCTGCT +
Preference number: 4 (lower is better)
Translates to: TGIPFTFQTYYVQGNNGHVDLDL*YGCLSA
Trigger: AGCAGATAGACAGCCATATCACAGATCCAGATCAAC...GTGACCGTTGTTGCCCTGTACATAGTATGTTTGAAAAGTAAAGGGAATTCCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR TCA 90 bp CTTTTCAAACATACTATGTACAGGGCAACAACGGTCACTGGCATAGTGCTAGTTTTTTTACAGCTGCTATaGACGAGAGTAAGAAGGTCC +
Preference number: 4 (lower is better)
Translates to: LFKHTMYRATTVTGIVLVFLQLL*TRVRRS
Trigger: GGACCTTCTTACTCTCGTTCATAGCAGCTGTAAAAA...AACTAGCACTATGCCAGTGACCGTTGTTGCCCTGTACATAGTATGTTTGAAAAG
42% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR TCA 90 bp GTTCTTTTAACAACTTTACCTGGGTCCATCAGAATGTCAAGACACAGTCTTGGTCTTAGCATTAGTAATTaGCGTGCCCATGGAGCTACA +
Preference number: 4 (lower is better)
Translates to: VLLTTLPGSIRMSRHSLGLSISN*RAHGAT
Trigger: TGTAGCTCCATGGGCACGTCAATTACTAATGCTAAG...ACCAAGACTGTGTCTTGACATTCTGATGGACCCAGGTAAAGTTGTTAAAAGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR TCA 90 bp TCCCAACTGGAATTCCCTTTACTTTTCAAACATACTATGTACAGGGCAACAACGCTTAGCATTAGTAATTaGCGTGCCCATGGAGCTACA +
Preference number: 4 (lower is better)
Translates to: SQLEFPLLFKHTMYRATTLSISN*RAHGAT
Trigger: TGTAGCTCCATGGGCACGTCAATTACTAATGCTAAG...CGTTGTTGCCCTGTACATAGTATGTTTGAAAAGTAAAGGGAATTCCAGTTGGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR TCA 90 bp ACTGGAATTCCCTTTACTTTTCAAACATACTATGTACAGGGCAACAACGGTCACCTTAGCATTAGTAATTaGCGTGCCCATGGAGCTACA +
Preference number: 4 (lower is better)
Translates to: TGIPFTFQTYYVQGNNGHLSISN*RAHGAT
Trigger: TGTAGCTCCATGGGCACGTCAATTACTAATGCTAAG...GTGACCGTTGTTGCCCTGTACATAGTATGTTTGAAAAGTAAAGGGAATTCCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR TCA 90 bp TCCCAACTGGAATTCCCTTTACTTTTCAAACATACTATGTACAGGGCAACAACGTTTGGTTTCTTCTCCTaGGGTGCCTCCTCATTTCTT +
Preference number: 4 (lower is better)
Translates to: SQLEFPLLFKHTMYRATTFGFFS*GASSFL
Trigger: AAGAAATGAGGAGGCACCTCAGGAGAAGAAACCAAA...CGTTGTTGCCCTGTACATAGTATGTTTGAAAAGTAAAGGGAATTCCAGTTGGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000666250.1
ENST00000668113.1
CDS-3UTR TCA 90 bp CTTTTCAAACATACTATGTACAGGGCAACAACGGTCACTGGCATAGTGCTAGTTGTGATGCTTCACGCCTaGCCCATTTTTAATAGAATG +
Preference number: 4 (lower is better)
Translates to: LFKHTMYRATTVTGIVLVVMLHA*PIFNRM
Trigger: CATTCTATTAAAAATGGGTCAGGCGTGAAGCATCAC...AACTAGCACTATGCCAGTGACCGTTGTTGCCCTGTACATAGTATGTTTGAAAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000666250.1
ENST00000668113.1
CDS-3UTR TCA 90 bp AGCCACAGAATTTTGTTTTTCAGAGTCCAACACATCTTAGCATTAGTAATTGACATGTCACTGGCAATGTaGTGCTTCACGCCTGACCCA +
Preference number: 4 (lower is better)
Translates to: SHRILFFRVQHILALVIDMSLAM*CFTPDP
Trigger: TGGGTCAGGCGTGAAGCATCACATTGCCAGTGACAT...GTCAATTACTAATGCTAAGATGTGTTGGACTCTGAAAAACAAAATTCTGTGGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000666250.1
ENST00000668113.1
CDS-3UTR TCA 90 bp GTTCTTTTAACAACTTTACCTGGGTCCATCAGAATGTCAAGACACAGTCTTGGTATGAGGATCCCATCCTaGTCGATACTTCGAATGGTA +
Preference number: 4 (lower is better)
Translates to: VLLTTLPGSIRMSRHSLGMRIPS*SILRMV
Trigger: TACCATTCGAAGTATCGATCAGGATGGGATCCTCAT...ACCAAGACTGTGTCTTGACATTCTGATGGACCCAGGTAAAGTTGTTAAAAGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000666250.1
CDS-3UTR TCA 90 bp CTTTTCAAACATACTATGTACAGGGCAACAACGGTCACTGGCATAGTGCTAGTTAGCACTACTAGTCCTTaGAACCGCAGATATATCACT +
Preference number: 4 (lower is better)
Translates to: LFKHTMYRATTVTGIVLVSTTSP*NRRYIT
Trigger: AGTGATATATCTGCGGTTTCAAGGACTAGTAGTGCT...AACTAGCACTATGCCAGTGACCGTTGTTGCCCTGTACATAGTATGTTTGAAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000666250.1
CDS-3UTR TCA 90 bp AAGTTTTCTGGCTTCTTTCTTTTTCCTGTGCTGGATGATTCCTTTCACTCTTCCGAGGAGACTGACATTTaGATATGTGGACTAGGAGAG +
Preference number: 4 (lower is better)
Translates to: KFSGFFLFPVLDDSFHSSEETDI*ICGLGE
Trigger: CTCTCCTAGTCCACATATTCAAATGTCAGTCTCCTC...GGAAGAGTGAAAGGAATCATCCAGCACAGGAAAAAGAAAGAAGCCAGAAAACTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000507677.5
CDS-3UTR TCA 90 bp GTTCTTTTAACAACTTTACCTGGGTCCATCAGAATGTCAAGACACAGTCTTGGTTACATTTCAAACTGCTaGTGCAGTTTTGTCTGGGGC +
Preference number: 4 (lower is better)
Translates to: VLLTTLPGSIRMSRHSLGYISNC*CSFVWG
Trigger: GCCCCAGACAAAACTGCATCAGCAGTTTGAAATGTA...ACCAAGACTGTGTCTTGACATTCTGATGGACCCAGGTAAAGTTGTTAAAAGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000668113.1
CDS-3UTR GCA 90 bp CTTTTCAAACATACTATGTACAGGGCAACAACGGTCACTGGCATAGTGCTAGTTTGGGCTTCTTTTCCTTaGATTGTTCAGTGTTTGTCC +
Preference number: 4 (lower is better)
Translates to: LFKHTMYRATTVTGIVLVWASFP*IVQCLS
Trigger: GGACAAACACTGAACAATGCAAGGAAAAGAAGCCCA...AACTAGCACTATGCCAGTGACCGTTGTTGCCCTGTACATAGTATGTTTGAAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507740.5
CDS-3UTR GCA 90 bp ATTACACTCCTCACCTGTAACACCGCTTCATGGCTGTATAGCTCCATTTCTGTGTTTCGTATTCATCTCTaGTTTCCACATCCTCATCAT +
Preference number: 4 (lower is better)
Translates to: ITLLTCNTASWLYSSISVFRIHL*FPHPHH
Trigger: ATGATGAGGATGTGGAAAGCAGAGATGAATACGAAA...CACAGAAATGGAGCTATACAGCCATGAAGCGGTGTTACAGGTGAGGAGTGTAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR GCA 90 bp CTTTTCAAACATACTATGTACAGGGCAACAACGGTCACTGGCATAGTGCTAGTTTCTTCCTCTCTCCTTTaGCTTTCGTATTCATCTCTG +
Preference number: 4 (lower is better)
Translates to: LFKHTMYRATTVTGIVLVSSSLL*LSYSSL
Trigger: CAGAGATGAATACGAAAGGCAAAGGAGAGAGGAAGA...AACTAGCACTATGCCAGTGACCGTTGTTGCCCTGTACATAGTATGTTTGAAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR GCA 90 bp TCCCAACTGGAATTCCCTTTACTTTTCAAACATACTATGTACAGGGCAACAACGCTAGGATCTAAGTGGTaGTGTTTCCGTAGTGAGTCA +
Preference number: 4 (lower is better)
Translates to: SQLEFPLLFKHTMYRATTLGSKW*CFRSES
Trigger: TGACTCACTACGGAAACAGCACCACTTAGATCCTAG...CGTTGTTGCCCTGTACATAGTATGTTTGAAAAGTAAAGGGAATTCCAGTTGGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR GCA 90 bp CTTTTCAAACATACTATGTACAGGGCAACAACGGTCACTGGCATAGTGCTAGTTTCAAATGTGGCTCCTTaGAGTAGTCTTCCATTCCAT +
Preference number: 4 (lower is better)
Translates to: LFKHTMYRATTVTGIVLVSNVAP*SSLPFH
Trigger: ATGGAATGGAAGACTACTGCAAGGAGCCACATTTGA...AACTAGCACTATGCCAGTGACCGTTGTTGCCCTGTACATAGTATGTTTGAAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR GCA 90 bp ATTACACTCCTCACCTGTAACACCGCTTCATGGCTGTATAGCTCCATTTCTGTGGGAAGGGAGATCTTTTaGTCCCAAAATTGTAACTAT +
Preference number: 4 (lower is better)
Translates to: ITLLTCNTASWLYSSISVGREIF*SQNCNY
Trigger: ATAGTTACAATTTTGGGAGCAAAAGATCTCCCTTCC...CACAGAAATGGAGCTATACAGCCATGAAGCGGTGTTACAGGTGAGGAGTGTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR GCA 90 bp GGTGGGACTTTGTCTTATAATCATATGAGCCAATTCTCCCTAATAAACTCCCTTATTCTCTTTGACCTTTaGAACCTCCGTGTTGGGCTC +
Preference number: 4 (lower is better)
Translates to: GGTLSYNHMSQFSLINSLILFDL*NLRVGL
Trigger: GAGCCCAACACGGAGGTTGCAAAGGTCAAAGAGAAT...AAGGGAGTTTATTAGGGAGAATTGGCTCATATGATTATAAGACAAAGTCCCACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507677.5
CDS-3UTR GCA 90 bp TCCCAACTGGAATTCCCTTTACTTTTCAAACATACTATGTACAGGGCAACAACGATATGGCTGTCTATCTaGTGCTTCACAATCCCTGTC +
Preference number: 4 (lower is better)
Translates to: SQLEFPLLFKHTMYRATTIWLSI*CFTIPV
Trigger: GACAGGGATTGTGAAGCAGCAGATAGACAGCCATAT...CGTTGTTGCCCTGTACATAGTATGTTTGAAAAGTAAAGGGAATTCCAGTTGGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000668113.1
CDS-3UTR GCA 90 bp GTTCTTTTAACAACTTTACCTGGGTCCATCAGAATGTCAAGACACAGTCTTGGTAAGATTTGTGATCCATaGGGCCATAATCTCCCCAGA +
Preference number: 4 (lower is better)
Translates to: VLLTTLPGSIRMSRHSLGKICDP*GHNLPR
Trigger: TCTGGGGAGATTATGGCCGCATGGATCACAAATCTT...ACCAAGACTGTGTCTTGACATTCTGATGGACCCAGGTAAAGTTGTTAAAAGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR GCA 90 bp TCCCAACTGGAATTCCCTTTACTTTTCAAACATACTATGTACAGGGCAACAACGACTTCTTTGGTCTCCTaGTTTTCACCTGATGCTTCC +
Preference number: 4 (lower is better)
Translates to: SQLEFPLLFKHTMYRATTTSLVS*FSPDAS
Trigger: GGAAGCATCAGGTGAAAAGCAGGAGACCAAAGAAGT...CGTTGTTGCCCTGTACATAGTATGTTTGAAAAGTAAAGGGAATTCCAGTTGGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR GCA 90 bp ATTACACTCCTCACCTGTAACACCGCTTCATGGCTGTATAGCTCCATTTCTGTGACTCCCAAGTCATGTTaGAAAATCCTTTTCAACATG +
Preference number: 4 (lower is better)
Translates to: ITLLTCNTASWLYSSISVTPKSC*KILFNM
Trigger: CATGTTGAAAAGGATTTTGCAACATGACTTGGGAGT...CACAGAAATGGAGCTATACAGCCATGAAGCGGTGTTACAGGTGAGGAGTGTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR GCA 90 bp ATATGGAGAAATCCTCTCACCCATTCATATCCACACGTAGAAGCTAGTCTCCGGACTCCCAAGTCATGTTaGAAAATCCTTTTCAACATG +
Preference number: 4 (lower is better)
Translates to: IWRNPLTHSYPHVEASLRTPKSC*KILFNM
Trigger: CATGTTGAAAAGGATTTTGCAACATGACTTGGGAGT...CCGGAGACTAGCTTCTACGTGTGGATATGAATGGGTGAGAGGATTTCTCCATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507740.5
CDS-3UTR GCA 90 bp GTTCTTTTAACAACTTTACCTGGGTCCATCAGAATGTCAAGACACAGTCTTGGTCCTTGGAACTGGGTCTaGTCATGTAGTTTTGGTTTC +
Preference number: 4 (lower is better)
Translates to: VLLTTLPGSIRMSRHSLGPWNWV*SCSFGF
Trigger: GAAACCAAAACTACATGAGCAGACCCAGTTCCAAGG...ACCAAGACTGTGTCTTGACATTCTGATGGACCCAGGTAAAGTTGTTAAAAGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000666250.1
ENST00000668113.1
CDS-3UTR GCA 90 bp CTTTTCAAACATACTATGTACAGGGCAACAACGGTCACTGGCATAGTGCTAGTTAGTAGAAACATTATCTaGCCCTCTATGAGGATCCCA +
Preference number: 4 (lower is better)
Translates to: LFKHTMYRATTVTGIVLVSRNII*PSMRIP
Trigger: TGGGATCCTCATAGAGGGGCAGATAATGTTTCTACT...AACTAGCACTATGCCAGTGACCGTTGTTGCCCTGTACATAGTATGTTTGAAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000666250.1
CDS-3UTR GCA 90 bp CTTTTCAAACATACTATGTACAGGGCAACAACGGTCACTGGCATAGTGCTAGTTCCATTCACCTTTTTCTaGTGGTCTTCCCATGTAACT +
Preference number: 4 (lower is better)
Translates to: LFKHTMYRATTVTGIVLVPFTFF*WSSHVT
Trigger: AGTTACATGGGAAGACCAGCAGAAAAAGGTGAATGG...AACTAGCACTATGCCAGTGACCGTTGTTGCCCTGTACATAGTATGTTTGAAAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000666250.1
CDS-3UTR CCA 90 bp CTTTTCAAACATACTATGTACAGGGCAACAACGGTCACTGGCATAGTGCTAGTTATCGCTGATTTTCCATaGCAGCTCTACGTTCTGATA +
Preference number: 4 (lower is better)
Translates to: LFKHTMYRATTVTGIVLVIADFP*QLYVLI
Trigger: TATCAGAACGTAGAGCTGCCATGGAAAATCAGCGAT...AACTAGCACTATGCCAGTGACCGTTGTTGCCCTGTACATAGTATGTTTGAAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CCA 90 bp TCCCAACTGGAATTCCCTTTACTTTTCAAACATACTATGTACAGGGCAACAACGCTCACTGACTCTGACTaGTCTGAACTGAGAGAATCA +
Preference number: 4 (lower is better)
Translates to: SQLEFPLLFKHTMYRATTLTDSD*SELRES
Trigger: TGATTCTCTCAGTTCAGACCAGTCAGAGTCAGTGAG...CGTTGTTGCCCTGTACATAGTATGTTTGAAAAGTAAAGGGAATTCCAGTTGGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CCA 90 bp GTTCTTTTAACAACTTTACCTGGGTCCATCAGAATGTCAAGACACAGTCTTGGTTTGTATATTCAGGCGTaGAAGCCAATTCCTCCTCTG +
Preference number: 4 (lower is better)
Translates to: VLLTTLPGSIRMSRHSLGLYIQA*KPIPPL
Trigger: CAGAGGAGGAATTGGCTTCCACGCCTGAATATACAA...ACCAAGACTGTGTCTTGACATTCTGATGGACCCAGGTAAAGTTGTTAAAAGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CCA 90 bp AAGTTTTCTGGCTTCTTTCTTTTTCCTGTGCTGGATGATTCCTTTCACTCTTCCACACTTCCTCAAATGTaGCTCCTTGCAGTAGTCTTC +
Preference number: 4 (lower is better)
Translates to: KFSGFFLFPVLDDSFHSSTLPQM*LLAVVF
Trigger: GAAGACTACTGCAAGGAGCCACATTTGAGGAAGTGT...GGAAGAGTGAAAGGAATCATCCAGCACAGGAAAAAGAAAGAAGCCAGAAAACTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000507677.5
CDS-3UTR CCA 90 bp ACTGGAATTCCCTTTACTTTTCAAACATACTATGTACAGGGCAACAACGGTCACACACTTCCTCAAATGTaGCTCCTTGCAGTAGTCTTC +
Preference number: 4 (lower is better)
Translates to: TGIPFTFQTYYVQGNNGHTLPQM*LLAVVF
Trigger: GAAGACTACTGCAAGGAGCCACATTTGAGGAAGTGT...GTGACCGTTGTTGCCCTGTACATAGTATGTTTGAAAAGTAAAGGGAATTCCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CCA 90 bp AGCCACAGAATTTTGTTTTTCAGAGTCCAACACATCTTAGCATTAGTAATTGACGCCTCCCATCTTCCCTaGAAGGGAGATCTTTTGCTC +
Preference number: 4 (lower is better)
Translates to: SHRILFFRVQHILALVIDASHLP*KGDLLL
Trigger: GAGCAAAAGATCTCCCTTCCAGGGAAGATGGGAGGC...GTCAATTACTAATGCTAAGATGTGTTGGACTCTGAAAAACAAAATTCTGTGGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CCA 90 bp AGCCACAGAATTTTGTTTTTCAGAGTCCAACACATCTTAGCATTAGTAATTGACCAACGTTCCCTTTGGTaGAAGCTGTGGAAGCTGTCG +
Preference number: 4 (lower is better)
Translates to: SHRILFFRVQHILALVIDQRSLW*KLWKLS
Trigger: CGACAGCTTCCACAGCTTCCACCAAAGGGAACGTTG...GTCAATTACTAATGCTAAGATGTGTTGGACTCTGAAAAACAAAATTCTGTGGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CCA 90 bp ATTACACTCCTCACCTGTAACACCGCTTCATGGCTGTATAGCTCCATTTCTGTGATCCGATCACCATATTaGATAGCTCTAGTTCATCTA +
Preference number: 4 (lower is better)
Translates to: ITLLTCNTASWLYSSISVIRSPY*IALVHL
Trigger: TAGATGAACTAGAGCTATCCAATATGGTGATCGGAT...CACAGAAATGGAGCTATACAGCCATGAAGCGGTGTTACAGGTGAGGAGTGTAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CCA 90 bp ATTACACTCCTCACCTGTAACACCGCTTCATGGCTGTATAGCTCCATTTCTGTGTTTGAGATTAATCCATaGCTTCAGATTGGACCAGAA +
Preference number: 4 (lower is better)
Translates to: ITLLTCNTASWLYSSISVFEINP*LQIGPE
Trigger: TTCTGGTCCAATCTGAAGCCATGGATTAATCTCAAA...CACAGAAATGGAGCTATACAGCCATGAAGCGGTGTTACAGGTGAGGAGTGTAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CCA 90 bp AAGTTTTCTGGCTTCTTTCTTTTTCCTGTGCTGGATGATTCCTTTCACTCTTCCAAATGGACTCACACTTaGACTAAGCCACTACTGGCT +
Preference number: 4 (lower is better)
Translates to: KFSGFFLFPVLDDSFHSSKWTHT*TKPLLA
Trigger: AGCCAGTAGTGGCTTAGTCCAAGTGTGAGTCCATTT...GGAAGAGTGAAAGGAATCATCCAGCACAGGAAAAAGAAAGAAGCCAGAAAACTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000507677.5
CDS-3UTR CCA 90 bp CTTTTCAAACATACTATGTACAGGGCAACAACGGTCACTGGCATAGTGCTAGTTCTCGAGTTGAGTCTTTaGAAATGGAGGAAATGGTTG +
Preference number: 4 (lower is better)
Translates to: LFKHTMYRATTVTGIVLVLELSL*KWRKWL
Trigger: CAACCATTTCCTCCATTTCCAAAGACTCAACTCGAG...AACTAGCACTATGCCAGTGACCGTTGTTGCCCTGTACATAGTATGTTTGAAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507740.5
3UTR CAA 72 bp GAAAAGGGCTTCTGTTGCATGAAACTGACTGATTCTTaGAGATTAATCCATGGCTTCAGATTGGACCAGAAC +
Preference number: 4 (lower is better)
Translates to: EKGFCCMKLTDS*RLIHGFRLDQN
Trigger: GTTCTGGTCCAATCTGAAGCCATGGATTAATCTCAAAGAATCAGTCAGTTTCATGCAACAGAAGCCCTTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
3UTR CAA 72 bp CCCTTCCCCAGCTTGCAGAAATTCTATGGTGGGACTTaGTCTTATAATCATATGAGCCAATTCTCCCTAATA +
Preference number: 4 (lower is better)
Translates to: PFPSLQKFYGGT*SYNHMSQFSLI
Trigger: TATTAGGGAGAATTGGCTCATATGATTATAAGACAAAGTCCCACCATAGAATTTCTGCAAGCTGGGGAAGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507677.5
CDS-3UTR TCA 90 bp AGAAACAGGCTCAGAAGACACAACATTAAGCATGCAGTGTTACCAGGGTTTGCATCGAGTTCTTTCCATTaGATAAGATCGCTGATTTTC +
Preference number: 4 (lower is better)
Translates to: RNRLRRHNIKHAVLPGFASSSFH*IRSLIF
Trigger: GAAAATCAGCGATCTTATTCAATGGAAAGAACTCGA...TGCAAACCCTGGTAACACTGCATGCTTAATGTTGTGTCTTCTGAGCCTGTTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR TCA 90 bp GTTCTTTTAACAACTTTACCTGGGTCCATCAGAATGTCAAGACACAGTCTTGGTCTGACTGGTCTGAACTaGGAGAATCATTCCTTAACA +
Preference number: 4 (lower is better)
Translates to: VLLTTLPGSIRMSRHSLGLTGLN*ENHSLT
Trigger: TGTTAAGGAATGATTCTCTCAGTTCAGACCAGTCAG...ACCAAGACTGTGTCTTGACATTCTGATGGACCCAGGTAAAGTTGTTAAAAGAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR TCA 90 bp AGCCACAGAATTTTGTTTTTCAGAGTCCAACACATCTTAGCATTAGTAATTGACTGCACAAAGCCGACCTaGTTCAGTCATCTTTCCTCC +
Preference number: 4 (lower is better)
Translates to: SHRILFFRVQHILALVIDCTKPT*FSHLSS
Trigger: GGAGGAAAGATGACTGAATCAGGTCGGCTTTGTGCA...GTCAATTACTAATGCTAAGATGTGTTGGACTCTGAAAAACAAAATTCTGTGGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR TCA 90 bp TTAAGACCTGTAGCTGCAGATTTTCTGAGCCATTCTTCCCACTGCACATGCTTTGTAACTATTAATTGGTaGCCAACCTTGTCAAACCAT +
Preference number: 4 (lower is better)
Translates to: LRPVAADFLSHSSHCTCFVTINW*PTLSNH
Trigger: ATGGTTTGACAAGGTTGGTCACCAATTAATAGTTAC...AAAGCATGTGCAGTGGGAAGAATGGCTCAGAAAATCTGCAGCTACAGGTCTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507677.5
CDS-3UTR TCA 90 bp AGAAACAGGCTCAGAAGACACAACATTAAGCATGCAGTGTTACCAGGGTTTGCAGTAACTATTAATTGGTaGCCAACCTTGTCAAACCAT +
Preference number: 4 (lower is better)
Translates to: RNRLRRHNIKHAVLPGFAVTINW*PTLSNH
Trigger: ATGGTTTGACAAGGTTGGTCACCAATTAATAGTTAC...TGCAAACCCTGGTAACACTGCATGCTTAATGTTGTGTCTTCTGAGCCTGTTTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR TCA 90 bp GTTCTTTTAACAACTTTACCTGGGTCCATCAGAATGTCAAGACACAGTCTTGGTTTTTTACAGCTGCTATaGACGAGAGTAAGAAGGTCC +
Preference number: 4 (lower is better)
Translates to: VLLTTLPGSIRMSRHSLGFLQLL*TRVRRS
Trigger: GGACCTTCTTACTCTCGTTCATAGCAGCTGTAAAAA...ACCAAGACTGTGTCTTGACATTCTGATGGACCCAGGTAAAGTTGTTAAAAGAAC
41% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR TCA 90 bp TCCCAACTGGAATTCCCTTTACTTTTCAAACATACTATGTACAGGGCAACAACGTTTTTACAGCTGCTATaGACGAGAGTAAGAAGGTCC +
Preference number: 4 (lower is better)
Translates to: SQLEFPLLFKHTMYRATTFLQLL*TRVRRS
Trigger: GGACCTTCTTACTCTCGTTCATAGCAGCTGTAAAAA...CGTTGTTGCCCTGTACATAGTATGTTTGAAAAGTAAAGGGAATTCCAGTTGGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR TCA 90 bp ACTGGAATTCCCTTTACTTTTCAAACATACTATGTACAGGGCAACAACGGTCACTTTTTACAGCTGCTATaGACGAGAGTAAGAAGGTCC +
Preference number: 4 (lower is better)
Translates to: TGIPFTFQTYYVQGNNGHFLQLL*TRVRRS
Trigger: GGACCTTCTTACTCTCGTTCATAGCAGCTGTAAAAA...GTGACCGTTGTTGCCCTGTACATAGTATGTTTGAAAAGTAAAGGGAATTCCAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR TCA 90 bp AGAAACAGGCTCAGAAGACACAACATTAAGCATGCAGTGTTACCAGGGTTTGCAGAACTCGAGTGTCATTaGATTCCAAATCTGATAGTT +
Preference number: 4 (lower is better)
Translates to: RNRLRRHNIKHAVLPGFAELECH*IPNLIV
Trigger: AACTATCAGATTTGGAATTCAATGACACTCGAGTTC...TGCAAACCCTGGTAACACTGCATGCTTAATGTTGTGTCTTCTGAGCCTGTTTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR TCA 90 bp CTAAGACCAGCAGTCCACTTATGTTATCGAGAAGTAGGAGACGGTGATTTCATTATCAAACATGGGGTATaGGAGAGGATCAGATCAAAA +
Preference number: 4 (lower is better)
Translates to: LRPAVHLCYREVGDGDFIIKHGV*ERIRSK
Trigger: TTTTGATCTGATCCTCTCTCATACCCCATGTTTGAT...AATGAAATCACCGTCTCCTACTTCTCGATAACATAAGTGGACTGCTGGTCTTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507740.5
CDS-3UTR TCA 90 bp AGAAACAGGCTCAGAAGACACAACATTAAGCATGCAGTGTTACCAGGGTTTGCATCGTCAAATACATGCTaGCTTACTTTAATGTACTCC +
Preference number: 4 (lower is better)
Translates to: RNRLRRHNIKHAVLPGFASSNTC*LTLMYS
Trigger: GGAGTACATTAAAGTAAGTCAGCATGTATTTGACGA...TGCAAACCCTGGTAACACTGCATGCTTAATGTTGTGTCTTCTGAGCCTGTTTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR TCA 90 bp AGAAACAGGCTCAGAAGACACAACATTAAGCATGCAGTGTTACCAGGGTTTGCAACTTTAACCCCTGTATaGATAATGCTGGTGCTAAAA +
Preference number: 4 (lower is better)
Translates to: RNRLRRHNIKHAVLPGFATLTPV*IMLVLK
Trigger: TTTTAGCACCAGCATTATTCATACAGGGGTTAAAGT...TGCAAACCCTGGTAACACTGCATGCTTAATGTTGTGTCTTCTGAGCCTGTTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR TCA 90 bp GTTCTTTTAACAACTTTACCTGGGTCCATCAGAATGTCAAGACACAGTCTTGGTATAGTGCTAGTTACATaGCTAAACCACAAGTCGAGG +
Preference number: 4 (lower is better)
Translates to: VLLTTLPGSIRMSRHSLGIVLVT*LNHKSR
Trigger: CCTCGACTTGTGGTTTAGTCATGTAACTAGCACTAT...ACCAAGACTGTGTCTTGACATTCTGATGGACCCAGGTAAAGTTGTTAAAAGAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR TCA 90 bp TCCCAACTGGAATTCCCTTTACTTTTCAAACATACTATGTACAGGGCAACAACGATAGTGCTAGTTACATaGCTAAACCACAAGTCGAGG +
Preference number: 4 (lower is better)
Translates to: SQLEFPLLFKHTMYRATTIVLVT*LNHKSR
Trigger: CCTCGACTTGTGGTTTAGTCATGTAACTAGCACTAT...CGTTGTTGCCCTGTACATAGTATGTTTGAAAAGTAAAGGGAATTCCAGTTGGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR TCA 90 bp CTAAGACCAGCAGTCCACTTATGTTATCGAGAAGTAGGAGACGGTGATTTCATTGGTAGAGTAAGAAAATaGCTGTCTCTATCTGGAGAA +
Preference number: 4 (lower is better)
Translates to: LRPAVHLCYREVGDGDFIGRVRK*LSLSGE
Trigger: TTCTCCAGATAGAGACAGTCATTTTCTTACTCTACC...AATGAAATCACCGTCTCCTACTTCTCGATAACATAAGTGGACTGCTGGTCTTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507740.5
CDS-3UTR TCA 90 bp GGTGGGACTTTGTCTTATAATCATATGAGCCAATTCTCCCTAATAAACTCCCTTTTTTCCTGTGCTGGATaGTTCCTTTCACTCTTCCTG +
Preference number: 4 (lower is better)
Translates to: GGTLSYNHMSQFSLINSLFSCAG*FLSLFL
Trigger: CAGGAAGAGTGAAAGGAATCATCCAGCACAGGAAAA...AAGGGAGTTTATTAGGGAGAATTGGCTCATATGATTATAAGACAAAGTCCCACC
41% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000507677.5
CDS-3UTR TCA 90 bp TCCCAACTGGAATTCCCTTTACTTTTCAAACATACTATGTACAGGGCAACAACGCCCACAAAGCAAAACTaGCACTTTAGCAGAAACACA +
Preference number: 4 (lower is better)
Translates to: SQLEFPLLFKHTMYRATTPTKQN*HFSRNT
Trigger: TGTGTTTCTGCTAAAGTGTCAGTTTTGCTTTGTGGG...CGTTGTTGCCCTGTACATAGTATGTTTGAAAAGTAAAGGGAATTCCAGTTGGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507740.5
CDS-3UTR TCA 90 bp ACTGGAATTCCCTTTACTTTTCAAACATACTATGTACAGGGCAACAACGGTCACTTCTTGCTGTTGCTGTaGTTCTTCTCCCATCTTCTT +
Preference number: 4 (lower is better)
Translates to: TGIPFTFQTYYVQGNNGHFLLLL*FFSHLL
Trigger: AAGAAGATGGGAGAAGAATCACAGCAACAGCAAGAA...GTGACCGTTGTTGCCCTGTACATAGTATGTTTGAAAAGTAAAGGGAATTCCAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000666250.1
ENST00000668113.1
CDS-3UTR GCA 90 bp CTTTTCAAACATACTATGTACAGGGCAACAACGGTCACTGGCATAGTGCTAGTTTCTGATATAGATCTTTaGCTTGATGGTCGATCCATC +
Preference number: 4 (lower is better)
Translates to: LFKHTMYRATTVTGIVLVSDIDL*LDGRSI
Trigger: GATGGATCGACCATCAAGGCAAAGATCTATATCAGA...AACTAGCACTATGCCAGTGACCGTTGTTGCCCTGTACATAGTATGTTTGAAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR GCA 90 bp GTTCTTTTAACAACTTTACCTGGGTCCATCAGAATGTCAAGACACAGTCTTGGTTCAAATGTGGCTCCTTaGAGTAGTCTTCCATTCCAT +
Preference number: 4 (lower is better)
Translates to: VLLTTLPGSIRMSRHSLGSNVAP*SSLPFH
Trigger: ATGGAATGGAAGACTACTGCAAGGAGCCACATTTGA...ACCAAGACTGTGTCTTGACATTCTGATGGACCCAGGTAAAGTTGTTAAAAGAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR GCA 90 bp GGTGGGACTTTGTCTTATAATCATATGAGCCAATTCTCCCTAATAAACTCCCTTACTGGACTCCAGTTGTaGATGTGTGCTATCAGGTAT +
Preference number: 4 (lower is better)
Translates to: GGTLSYNHMSQFSLINSLTGLQL*MCAIRY
Trigger: ATACCTGATAGCACACATGCACAACTGGAGTCCAGT...AAGGGAGTTTATTAGGGAGAATTGGCTCATATGATTATAAGACAAAGTCCCACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507677.5
CDS-3UTR GCA 90 bp GCTGGTAAAGTATTGTTTCTAGATGTGTCTGTAAGGTGTTGCCAGAGGAGACTGGGAAGGGAGATCTTTTaGTCCCAAAATTGTAACTAT +
Preference number: 4 (lower is better)
Translates to: AGKVLFLDVSVRCCQRRLGREIF*SQNCNY
Trigger: ATAGTTACAATTTTGGGAGCAAAAGATCTCCCTTCC...CAGTCTCCTCTGGCAACACCTTACAGACACATCTAGAAACAATACTTTACCAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507677.5
CDS-3UTR GCA 90 bp AGCCACAGAATTTTGTTTTTCAGAGTCCAACACATCTTAGCATTAGTAATTGACTCCTCTTCTTTCTTCTaGCTATCCATGACGGCCAGG +
Preference number: 4 (lower is better)
Translates to: SHRILFFRVQHILALVIDSSSFF*LSMTAR
Trigger: CCTGGCCGTCATGGATAGGCAGAAGAAAGAAGAGGA...GTCAATTACTAATGCTAAGATGTGTTGGACTCTGAAAAACAAAATTCTGTGGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CCA 90 bp TCCCAACTGGAATTCCCTTTACTTTTCAAACATACTATGTACAGGGCAACAACGATCGCTGATTTTCCATaGCAGCTCTACGTTCTGATA +
Preference number: 4 (lower is better)
Translates to: SQLEFPLLFKHTMYRATTIADFP*QLYVLI
Trigger: TATCAGAACGTAGAGCTGCCATGGAAAATCAGCGAT...CGTTGTTGCCCTGTACATAGTATGTTTGAAAAGTAAAGGGAATTCCAGTTGGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CCA 90 bp GTTCTTTTAACAACTTTACCTGGGTCCATCAGAATGTCAAGACACAGTCTTGGTGAGGACTATGGTTTGTaGTCCTTTGTGCATAAGAAC +
Preference number: 4 (lower is better)
Translates to: VLLTTLPGSIRMSRHSLGEDYGL*SFVHKN
Trigger: GTTCTTATGCACAAAGGACCACAAACCATAGTCCTC...ACCAAGACTGTGTCTTGACATTCTGATGGACCCAGGTAAAGTTGTTAAAAGAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CCA 90 bp AGCCACAGAATTTTGTTTTTCAGAGTCCAACACATCTTAGCATTAGTAATTGACAGTCTGGTCTATCTATaGGTAGTGGACTCCTCCTGG +
Preference number: 4 (lower is better)
Translates to: SHRILFFRVQHILALVIDSLVYL*VVDSSW
Trigger: CCAGGAGGAGTCCACTACCCATAGATAGACCAGACT...GTCAATTACTAATGCTAAGATGTGTTGGACTCTGAAAAACAAAATTCTGTGGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CCA 90 bp ACTGGAATTCCCTTTACTTTTCAAACATACTATGTACAGGGCAACAACGGTCACTCCTCTTCCAAAGAGTaGCCACCAAAGTACATCATT +
Preference number: 4 (lower is better)
Translates to: TGIPFTFQTYYVQGNNGHSSSKE*PPKYII
Trigger: AATGATGTACTTTGGTGGCCACTCTTTGGAAGAGGA...GTGACCGTTGTTGCCCTGTACATAGTATGTTTGAAAAGTAAAGGGAATTCCAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000668113.1
CDS-3UTR CCA 90 bp GCTGGTAAAGTATTGTTTCTAGATGTGTCTGTAAGGTGTTGCCAGAGGAGACTGTTCTCTTCGGTGGACTaGAGAATAAATGAATGTTTG +
Preference number: 4 (lower is better)
Translates to: AGKVLFLDVSVRCCQRRLFSSVD*RINECL
Trigger: CAAACATTCATTTATTCTCCAGTCCACCGAAGAGAA...CAGTCTCCTCTGGCAACACCTTACAGACACATCTAGAAACAATACTTTACCAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507677.5
CDS-3UTR CCA 90 bp AGCCACAGAATTTTGTTTTTCAGAGTCCAACACATCTTAGCATTAGTAATTGACTCTTCGTGGCATATATaGAGAAGGGTGGGGAAGTGG +
Preference number: 4 (lower is better)
Translates to: SHRILFFRVQHILALVIDSSWHI*RRVGKW
Trigger: CCACTTCCCCACCCTTCTCCATATATGCCACGAAGA...GTCAATTACTAATGCTAAGATGTGTTGGACTCTGAAAAACAAAATTCTGTGGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CCA 90 bp TCCCAACTGGAATTCCCTTTACTTTTCAAACATACTATGTACAGGGCAACAACGGTTGTTCTGTTGATCTaGATCTGTGATATGGCTGTC +
Preference number: 4 (lower is better)
Translates to: SQLEFPLLFKHTMYRATTVVLLI*ICDMAV
Trigger: GACAGCCATATCACAGATCCAGATCAACAGAACAAC...CGTTGTTGCCCTGTACATAGTATGTTTGAAAAGTAAAGGGAATTCCAGTTGGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CCA 90 bp AGCCACAGAATTTTGTTTTTCAGAGTCCAACACATCTTAGCATTAGTAATTGACATCCAACGTTCCCTTTaGTGGAAGCTGTGGAAGCTG +
Preference number: 4 (lower is better)
Translates to: SHRILFFRVQHILALVIDIQRSL*WKLWKL
Trigger: CAGCTTCCACAGCTTCCACCAAAGGGAACGTTGGAT...GTCAATTACTAATGCTAAGATGTGTTGGACTCTGAAAAACAAAATTCTGTGGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CCA 90 bp AGAAACAGGCTCAGAAGACACAACATTAAGCATGCAGTGTTACCAGGGTTTGCAGTTTCTGTACTTCTTTaGACAGTGCTCCTTAGTTTT +
Preference number: 4 (lower is better)
Translates to: RNRLRRHNIKHAVLPGFAVSVLL*TVLLSF
Trigger: AAAACTAAGGAGCACTGTCCAAAGAAGTACAGAAAC...TGCAAACCCTGGTAACACTGCATGCTTAATGTTGTGTCTTCTGAGCCTGTTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CCA 90 bp AGAAACAGGCTCAGAAGACACAACATTAAGCATGCAGTGTTACCAGGGTTTGCATCATCTAAAAGTATCTaGGCCACTCCCATAAAAGAT +
Preference number: 4 (lower is better)
Translates to: RNRLRRHNIKHAVLPGFASSKSI*ATPIKD
Trigger: ATCTTTTATGGGAGTGGCCCAGATACTTTTAGATGA...TGCAAACCCTGGTAACACTGCATGCTTAATGTTGTGTCTTCTGAGCCTGTTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CCA 90 bp TCCCAACTGGAATTCCCTTTACTTTTCAAACATACTATGTACAGGGCAACAACGCTTTCCAGAGATGATTaGGAAGCTCTTCTTGTCAGA +
Preference number: 4 (lower is better)
Translates to: SQLEFPLLFKHTMYRATTLSRDD*EALLVR
Trigger: TCTGACAAGAAGAGCTTCCCAATCATCTCTGGAAAG...CGTTGTTGCCCTGTACATAGTATGTTTGAAAAGTAAAGGGAATTCCAGTTGGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CCA 90 bp GTTCTTTTAACAACTTTACCTGGGTCCATCAGAATGTCAAGACACAGTCTTGGTTGTAACACCGCTTCATaGCTGTATAGCTCCATTTCT +
Preference number: 4 (lower is better)
Translates to: VLLTTLPGSIRMSRHSLGCNTAS*LYSSIS
Trigger: AGAAATGGAGCTATACAGCCATGAAGCGGTGTTACA...ACCAAGACTGTGTCTTGACATTCTGATGGACCCAGGTAAAGTTGTTAAAAGAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CCA 90 bp AGAAACAGGCTCAGAAGACACAACATTAAGCATGCAGTGTTACCAGGGTTTGCATTTAACAACTTTACCTaGGTCCATCAGAATGTCAAG +
Preference number: 4 (lower is better)
Translates to: RNRLRRHNIKHAVLPGFAFNNFT*VHQNVK
Trigger: CTTGACATTCTGATGGACCCAGGTAAAGTTGTTAAA...TGCAAACCCTGGTAACACTGCATGCTTAATGTTGTGTCTTCTGAGCCTGTTTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CCA 90 bp AGCCACAGAATTTTGTTTTTCAGAGTCCAACACATCTTAGCATTAGTAATTGACAGGGTGCAAAGACATTaGGGATGCCTCACTGCTATG +
Preference number: 4 (lower is better)
Translates to: SHRILFFRVQHILALVIDRVQRH*GCLTAM
Trigger: CATAGCAGTGAGGCATCCCCAATGTCTTTGCACCCT...GTCAATTACTAATGCTAAGATGTGTTGGACTCTGAAAAACAAAATTCTGTGGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000507740.5
ENST00000666250.1
CDS-3UTR CCA 90 bp GGTGGGACTTTGTCTTATAATCATATGAGCCAATTCTCCCTAATAAACTCCCTTAAAATTAGCCAGGCATaGTGGTGTGCGCTTGTAATC +
Preference number: 4 (lower is better)
Translates to: GGTLSYNHMSQFSLINSLKISQA*WCALVI
Trigger: GATTACAAGCGCACACCACCATGCCTGGCTAATTTT...AAGGGAGTTTATTAGGGAGAATTGGCTCATATGATTATAAGACAAAGTCCCACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507677.5
CDS-3UTR CCA 90 bp AGCCACAGAATTTTGTTTTTCAGAGTCCAACACATCTTAGCATTAGTAATTGACGGCAGCCTCCAGCGCTaGGACAAATACATACAAATC +
Preference number: 4 (lower is better)
Translates to: SHRILFFRVQHILALVIDGSLQR*DKYIQI
Trigger: GATTTGTATGTATTTGTCCCAGCGCTGGAGGCTGCC...GTCAATTACTAATGCTAAGATGTGTTGGACTCTGAAAAACAAAATTCTGTGGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CCA 90 bp CTTTTCAAACATACTATGTACAGGGCAACAACGGTCACTGGCATAGTGCTAGTTCAATATGAACAGTTATaGCCACATCCATCAGCAAAC +
Preference number: 4 (lower is better)
Translates to: LFKHTMYRATTVTGIVLVQYEQL*PHPSAN
Trigger: GTTTGCTGATGGATGTGGCCATAACTGTTCATATTG...AACTAGCACTATGCCAGTGACCGTTGTTGCCCTGTACATAGTATGTTTGAAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000666250.1
ENST00000668113.1
CDS-3UTR TCA 90 bp AGCCACAGAATTTTGTTTTTCAGAGTCCAACACATCTTAGCATTAGTAATTGACTCTTTGGAATGCCTATaGCTTCTCCTGTTGGAGTCC +
Preference number: 4 (lower is better)
Translates to: SHRILFFRVQHILALVIDSLECL*LLLLES
Trigger: GGACTCCAACAGGAGAAGTCATAGGCATTCCAAAGA...GTCAATTACTAATGCTAAGATGTGTTGGACTCTGAAAAACAAAATTCTGTGGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR TCA 90 bp ACTGGAATTCCCTTTACTTTTCAAACATACTATGTACAGGGCAACAACGGTCACATCTCCAATAGGCCTTaGAACTACAAGTTCTACTTG +
Preference number: 4 (lower is better)
Translates to: TGIPFTFQTYYVQGNNGHISNRP*NYKFYL
Trigger: CAAGTAGAACTTGTAGTTTCAAGGCCTATTGGAGAT...GTGACCGTTGTTGCCCTGTACATAGTATGTTTGAAAAGTAAAGGGAATTCCAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR TCA 90 bp CTTTTCAAACATACTATGTACAGGGCAACAACGGTCACTGGCATAGTGCTAGTTGTAACTATTAATTGGTaGCCAACCTTGTCAAACCAT +
Preference number: 4 (lower is better)
Translates to: LFKHTMYRATTVTGIVLVVTINW*PTLSNH
Trigger: ATGGTTTGACAAGGTTGGTCACCAATTAATAGTTAC...AACTAGCACTATGCCAGTGACCGTTGTTGCCCTGTACATAGTATGTTTGAAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR TCA 90 bp AAGTTTTCTGGCTTCTTTCTTTTTCCTGTGCTGGATGATTCCTTTCACTCTTCCGGACTGGAGAATAAATaGATGTTTGGTTCCATTTGG +
Preference number: 4 (lower is better)
Translates to: KFSGFFLFPVLDDSFHSSGLENK*MFGSIW
Trigger: CCAAATGGAACCAAACATTCATTTATTCTCCAGTCC...GGAAGAGTGAAAGGAATCATCCAGCACAGGAAAAAGAAAGAAGCCAGAAAACTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000507677.5
CDS-3UTR TCA 90 bp TCCCAACTGGAATTCCCTTTACTTTTCAAACATACTATGTACAGGGCAACAACGGGACTGGAGAATAAATaGATGTTTGGTTCCATTTGG +
Preference number: 4 (lower is better)
Translates to: SQLEFPLLFKHTMYRATTGLENK*MFGSIW
Trigger: CCAAATGGAACCAAACATTCATTTATTCTCCAGTCC...CGTTGTTGCCCTGTACATAGTATGTTTGAAAAGTAAAGGGAATTCCAGTTGGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR TCA 90 bp AGCCACAGAATTTTGTTTTTCAGAGTCCAACACATCTTAGCATTAGTAATTGACGAGACATCATGCGTCTaGAGTTTGTACCAATGTGGC +
Preference number: 4 (lower is better)
Translates to: SHRILFFRVQHILALVIDETSCV*SLYQCG
Trigger: GCCACATTGGTACAAACTTCAGACGCATGATGTCTC...GTCAATTACTAATGCTAAGATGTGTTGGACTCTGAAAAACAAAATTCTGTGGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR TCA 90 bp AGCCACAGAATTTTGTTTTTCAGAGTCCAACACATCTTAGCATTAGTAATTGACAAGGCATCGACCTCATaGGGTTTGTATCAGGACGTT +
Preference number: 4 (lower is better)
Translates to: SHRILFFRVQHILALVIDKASTS*GLYQDV
Trigger: AACGTCCTGATACAAACCTCATGAGGTCGATGCCTT...GTCAATTACTAATGCTAAGATGTGTTGGACTCTGAAAAACAAAATTCTGTGGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR TCA 90 bp AGCCACAGAATTTTGTTTTTCAGAGTCCAACACATCTTAGCATTAGTAATTGACTCCATCATTCCTACCTaGATGTCACCCATTGCAGGT +
Preference number: 4 (lower is better)
Translates to: SHRILFFRVQHILALVIDSIIPT*MSPIAG
Trigger: ACCTGCAATGGGTGACATTCAGGTAGGAATGATGGA...GTCAATTACTAATGCTAAGATGTGTTGGACTCTGAAAAACAAAATTCTGTGGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR TCA 90 bp CTTTTCAAACATACTATGTACAGGGCAACAACGGTCACTGGCATAGTGCTAGTTGAACTCGAGTGTCATTaGATTCCAAATCTGATAGTT +
Preference number: 4 (lower is better)
Translates to: LFKHTMYRATTVTGIVLVELECH*IPNLIV
Trigger: AACTATCAGATTTGGAATTCAATGACACTCGAGTTC...AACTAGCACTATGCCAGTGACCGTTGTTGCCCTGTACATAGTATGTTTGAAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR TCA 90 bp CTTTTCAAACATACTATGTACAGGGCAACAACGGTCACTGGCATAGTGCTAGTTACTTTAACCCCTGTATaGATAATGCTGGTGCTAAAA +
Preference number: 4 (lower is better)
Translates to: LFKHTMYRATTVTGIVLVTLTPV*IMLVLK
Trigger: TTTTAGCACCAGCATTATTCATACAGGGGTTAAAGT...AACTAGCACTATGCCAGTGACCGTTGTTGCCCTGTACATAGTATGTTTGAAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR TCA 90 bp GTTCTTTTAACAACTTTACCTGGGTCCATCAGAATGTCAAGACACAGTCTTGGTGCACAAAAGATTATGTaGCTGCATCTTAGTATCAGG +
Preference number: 4 (lower is better)
Translates to: VLLTTLPGSIRMSRHSLGAQKIM*LHLSIR
Trigger: CCTGATACTAAGATGCAGTCACATAATCTTTTGTGC...ACCAAGACTGTGTCTTGACATTCTGATGGACCCAGGTAAAGTTGTTAAAAGAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR TCA 90 bp TCCCAACTGGAATTCCCTTTACTTTTCAAACATACTATGTACAGGGCAACAACGGGTAGAGTAAGAAAATaGCTGTCTCTATCTGGAGAA +
Preference number: 4 (lower is better)
Translates to: SQLEFPLLFKHTMYRATTGRVRK*LSLSGE
Trigger: TTCTCCAGATAGAGACAGTCATTTTCTTACTCTACC...CGTTGTTGCCCTGTACATAGTATGTTTGAAAAGTAAAGGGAATTCCAGTTGGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000507740.5
ENST00000666250.1
CDS-3UTR TCA 90 bp AGCCACAGAATTTTGTTTTTCAGAGTCCAACACATCTTAGCATTAGTAATTGACAGCACATGTCTCCACTaGTGCTGGTGCTTTTTGTCA +
Preference number: 4 (lower is better)
Translates to: SHRILFFRVQHILALVIDSTCLH*CWCFLS
Trigger: TGACAAAAAGCACCAGCATCAGTGGAGACATGTGCT...GTCAATTACTAATGCTAAGATGTGTTGGACTCTGAAAAACAAAATTCTGTGGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000666250.1
CDS-3UTR TCA 90 bp CTAAGACCAGCAGTCCACTTATGTTATCGAGAAGTAGGAGACGGTGATTTCATTAGAAGTAGGAGACGGTaGTTTCATTCTTTAAATGAC +
Preference number: 4 (lower is better)
Translates to: LRPAVHLCYREVGDGDFIRSRRR*FHSLND
Trigger: GTCATTTAAAGAATGAAATCACCGTCTCCTACTTCT...AATGAAATCACCGTCTCCTACTTCTCGATAACATAAGTGGACTGCTGGTCTTAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507740.5
CDS-3UTR TCA 90 bp TCCCAACTGGAATTCCCTTTACTTTTCAAACATACTATGTACAGGGCAACAACGTGGGCTTCTTTTCCTTaGAATAATCTTGGAGTTCAG +
Preference number: 4 (lower is better)
Translates to: SQLEFPLLFKHTMYRATTWASFP*NNLGVQ
Trigger: CTGAACTCCAAGATTATTTCAAGGAAAAGAAGCCCA...CGTTGTTGCCCTGTACATAGTATGTTTGAAAAGTAAAGGGAATTCCAGTTGGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000668113.1
CDS-3UTR GCA 90 bp TCCCAACTGGAATTCCCTTTACTTTTCAAACATACTATGTACAGGGCAACAACGTCTGATATAGATCTTTaGCTTGATGGTCGATCCATC +
Preference number: 4 (lower is better)
Translates to: SQLEFPLLFKHTMYRATTSDIDL*LDGRSI
Trigger: GATGGATCGACCATCAAGGCAAAGATCTATATCAGA...CGTTGTTGCCCTGTACATAGTATGTTTGAAAAGTAAAGGGAATTCCAGTTGGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR GCA 90 bp AGCCACAGAATTTTGTTTTTCAGAGTCCAACACATCTTAGCATTAGTAATTGACATTCCTCCTCTGAACTaGTCAACGAAATCTGGCGCA +
Preference number: 4 (lower is better)
Translates to: SHRILFFRVQHILALVIDIPPLN*STKSGA
Trigger: TGCGCCAGATTTCGTTGAGCAGTTCAGAGGAGGAAT...GTCAATTACTAATGCTAAGATGTGTTGGACTCTGAAAAACAAAATTCTGTGGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR GCA 90 bp AGCCACAGAATTTTGTTTTTCAGAGTCCAACACATCTTAGCATTAGTAATTGACATTCTCTTTGACCTTTaGAACCTCCGTGTTGGGCTC +
Preference number: 4 (lower is better)
Translates to: SHRILFFRVQHILALVIDILFDL*NLRVGL
Trigger: GAGCCCAACACGGAGGTTGCAAAGGTCAAAGAGAAT...GTCAATTACTAATGCTAAGATGTGTTGGACTCTGAAAAACAAAATTCTGTGGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR GCA 90 bp TCCCAACTGGAATTCCCTTTACTTTTCAAACATACTATGTACAGGGCAACAACGGAAAAGGGCTTCTGTTaGATGAAACTGACTGATTCT +
Preference number: 4 (lower is better)
Translates to: SQLEFPLLFKHTMYRATTEKGFC*MKLTDS
Trigger: AGAATCAGTCAGTTTCATGCAACAGAAGCCCTTTTC...CGTTGTTGCCCTGTACATAGTATGTTTGAAAAGTAAAGGGAATTCCAGTTGGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR GCA 90 bp ACTGGAATTCCCTTTACTTTTCAAACATACTATGTACAGGGCAACAACGGTCACGAAAAGGGCTTCTGTTaGATGAAACTGACTGATTCT +
Preference number: 4 (lower is better)
Translates to: TGIPFTFQTYYVQGNNGHEKGFC*MKLTDS
Trigger: AGAATCAGTCAGTTTCATGCAACAGAAGCCCTTTTC...GTGACCGTTGTTGCCCTGTACATAGTATGTTTGAAAAGTAAAGGGAATTCCAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR GCA 90 bp AGCCACAGAATTTTGTTTTTCAGAGTCCAACACATCTTAGCATTAGTAATTGACTTGGGGATGCCTCACTaGTATGCCAAGACGTATGAT +
Preference number: 4 (lower is better)
Translates to: SHRILFFRVQHILALVIDLGMPH*YAKTYD
Trigger: ATCATACGTCTTGGCATAGCAGTGAGGCATCCCCAA...GTCAATTACTAATGCTAAGATGTGTTGGACTCTGAAAAACAAAATTCTGTGGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000507740.5
ENST00000666250.1
CDS-3UTR GCA 90 bp AGCCACAGAATTTTGTTTTTCAGAGTCCAACACATCTTAGCATTAGTAATTGACCAAAGACATTGGGGATaGCTCACTGCTATGCCAAGA +
Preference number: 4 (lower is better)
Translates to: SHRILFFRVQHILALVIDQRHWG*LTAMPR
Trigger: TCTTGGCATAGCAGTGAGGCATCCCCAATGTCTTTG...GTCAATTACTAATGCTAAGATGTGTTGGACTCTGAAAAACAAAATTCTGTGGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000507740.5
ENST00000666250.1
CDS-3UTR CCA 90 bp GTTCTTTTAACAACTTTACCTGGGTCCATCAGAATGTCAAGACACAGTCTTGGTTTCTATTCTGATCTCTaGACACAGATGGGCTTCTTT +
Preference number: 4 (lower is better)
Translates to: VLLTTLPGSIRMSRHSLGFYSDL*TQMGFF
Trigger: AAAGAAGCCCATCTGTGTCCAGAGATCAGAATAGAA...ACCAAGACTGTGTCTTGACATTCTGATGGACCCAGGTAAAGTTGTTAAAAGAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CCA 90 bp AGCCACAGAATTTTGTTTTTCAGAGTCCAACACATCTTAGCATTAGTAATTGACCGGGACACTTCAGCATaGATCCGCATTTGTTCTTCA +
Preference number: 4 (lower is better)
Translates to: SHRILFFRVQHILALVIDRDTSA*IRICSS
Trigger: TGAAGAACAAATGCGGATCCATGCTGAAGTGTCCCG...GTCAATTACTAATGCTAAGATGTGTTGGACTCTGAAAAACAAAATTCTGTGGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CCA 90 bp CTTTTCAAACATACTATGTACAGGGCAACAACGGTCACTGGCATAGTGCTAGTTTTCTCTTCGGTGGACTaGAGAATAAATGAATGTTTG +
Preference number: 4 (lower is better)
Translates to: LFKHTMYRATTVTGIVLVFSSVD*RINECL
Trigger: CAAACATTCATTTATTCTCCAGTCCACCGAAGAGAA...AACTAGCACTATGCCAGTGACCGTTGTTGCCCTGTACATAGTATGTTTGAAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CCA 90 bp AGCCACAGAATTTTGTTTTTCAGAGTCCAACACATCTTAGCATTAGTAATTGACATGGAGCTGTCTTCGTaGCATATATGGAGAAGGGTG +
Preference number: 4 (lower is better)
Translates to: SHRILFFRVQHILALVIDMELSS*HIWRRV
Trigger: CACCCTTCTCCATATATGCCACGAAGACAGCTCCAT...GTCAATTACTAATGCTAAGATGTGTTGGACTCTGAAAAACAAAATTCTGTGGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CCA 90 bp CTTTTCAAACATACTATGTACAGGGCAACAACGGTCACTGGCATAGTGCTAGTTTCATCTAAAAGTATCTaGGCCACTCCCATAAAAGAT +
Preference number: 4 (lower is better)
Translates to: LFKHTMYRATTVTGIVLVSSKSI*ATPIKD
Trigger: ATCTTTTATGGGAGTGGCCCAGATACTTTTAGATGA...AACTAGCACTATGCCAGTGACCGTTGTTGCCCTGTACATAGTATGTTTGAAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CCA 90 bp CTAAGACCAGCAGTCCACTTATGTTATCGAGAAGTAGGAGACGGTGATTTCATTATCCGATCACCATATTaGATAGCTCTAGTTCATCTA +
Preference number: 4 (lower is better)
Translates to: LRPAVHLCYREVGDGDFIIRSPY*IALVHL
Trigger: TAGATGAACTAGAGCTATCCAATATGGTGATCGGAT...AATGAAATCACCGTCTCCTACTTCTCGATAACATAAGTGGACTGCTGGTCTTAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507740.5
CDS-3UTR CCA 90 bp CTTTTCAAACATACTATGTACAGGGCAACAACGGTCACTGGCATAGTGCTAGTTATCCGATCACCATATTaGATAGCTCTAGTTCATCTA +
Preference number: 4 (lower is better)
Translates to: LFKHTMYRATTVTGIVLVIRSPY*IALVHL
Trigger: TAGATGAACTAGAGCTATCCAATATGGTGATCGGAT...AACTAGCACTATGCCAGTGACCGTTGTTGCCCTGTACATAGTATGTTTGAAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CCA 90 bp AGCCACAGAATTTTGTTTTTCAGAGTCCAACACATCTTAGCATTAGTAATTGACTCCATGGCTTCAGATTaGACCAGAACTCGAGTGTCA +
Preference number: 4 (lower is better)
Translates to: SHRILFFRVQHILALVIDSMASD*TRTRVS
Trigger: TGACACTCGAGTTCTGGTCCAATCTGAAGCCATGGA...GTCAATTACTAATGCTAAGATGTGTTGGACTCTGAAAAACAAAATTCTGTGGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CCA 90 bp TCCCAACTGGAATTCCCTTTACTTTTCAAACATACTATGTACAGGGCAACAACGGTCAAGACACAGTCTTaGTGTATTTCATATTGCACC +
Preference number: 4 (lower is better)
Translates to: SQLEFPLLFKHTMYRATTVKTQS*CISYCT
Trigger: GGTGCAATATGAAATACACCAAGACTGTGTCTTGAC...CGTTGTTGCCCTGTACATAGTATGTTTGAAAAGTAAAGGGAATTCCAGTTGGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CCA 90 bp GTTCTTTTAACAACTTTACCTGGGTCCATCAGAATGTCAAGACACAGTCTTGGTGTCAAGACACAGTCTTaGTGTATTTCATATTGCACC +
Preference number: 4 (lower is better)
Translates to: VLLTTLPGSIRMSRHSLGVKTQS*CISYCT
Trigger: GGTGCAATATGAAATACACCAAGACTGTGTCTTGAC...ACCAAGACTGTGTCTTGACATTCTGATGGACCCAGGTAAAGTTGTTAAAAGAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CCA 90 bp AGCCACAGAATTTTGTTTTTCAGAGTCCAACACATCTTAGCATTAGTAATTGACGGCAACAACGGTCACTaGCATAGTGCTAGTTACATG +
Preference number: 4 (lower is better)
Translates to: SHRILFFRVQHILALVIDGNNGH*HSASYM
Trigger: CATGTAACTAGCACTATGCCAGTGACCGTTGTTGCC...GTCAATTACTAATGCTAAGATGTGTTGGACTCTGAAAAACAAAATTCTGTGGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CCA 90 bp CTAAGACCAGCAGTCCACTTATGTTATCGAGAAGTAGGAGACGGTGATTTCATTATGACTGTCTCTATCTaGAGAATAATGGTCATCCAT +
Preference number: 4 (lower is better)
Translates to: LRPAVHLCYREVGDGDFIMTVSI*RIMVIH
Trigger: ATGGATGACCATTATTCTCCAGATAGAGACAGTCAT...AATGAAATCACCGTCTCCTACTTCTCGATAACATAAGTGGACTGCTGGTCTTAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507740.5
CDS-3UTR CCA 90 bp AGCCACAGAATTTTGTTTTTCAGAGTCCAACACATCTTAGCATTAGTAATTGACAATCTTGTTCCAGTCTaGGATCTGATCCGGCTACCT +
Preference number: 4 (lower is better)
Translates to: SHRILFFRVQHILALVIDNLVPV*DLIRLP
Trigger: AGGTAGCCGGATCAGATCCCAGACTGGAACAAGATT...GTCAATTACTAATGCTAAGATGTGTTGGACTCTGAAAAACAAAATTCTGTGGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000666250.1
CDS-3UTR CCA 90 bp CTTTTCAAACATACTATGTACAGGGCAACAACGGTCACTGGCATAGTGCTAGTTTTGAGTCTTTGGAAATaGAGGAAATGGTTGTTTCCA +
Preference number: 4 (lower is better)
Translates to: LFKHTMYRATTVTGIVLVLSLWK*RKWLFP
Trigger: TGGAAACAACCATTTCCTCCATTTCCAAAGACTCAA...AACTAGCACTATGCCAGTGACCGTTGTTGCCCTGTACATAGTATGTTTGAAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507740.5
CDS-3UTR CCA 90 bp ACTGGAATTCCCTTTACTTTTCAAACATACTATGTACAGGGCAACAACGGTCACATACATACAAATCAATaGCCTTCAATCCAAGGCGAC +
Preference number: 4 (lower is better)
Translates to: TGIPFTFQTYYVQGNNGHIHTNQ*PSIQGD
Trigger: GTCGCCTTGGATTGAAGGCCATTGATTTGTATGTAT...GTGACCGTTGTTGCCCTGTACATAGTATGTTTGAAAAGTAAAGGGAATTCCAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CCA 90 bp ACTGGAATTCCCTTTACTTTTCAAACATACTATGTACAGGGCAACAACGGTCACCAATATGAACAGTTATaGCCACATCCATCAGCAAAC +
Preference number: 4 (lower is better)
Translates to: TGIPFTFQTYYVQGNNGHQYEQL*PHPSAN
Trigger: GTTTGCTGATGGATGTGGCCATAACTGTTCATATTG...GTGACCGTTGTTGCCCTGTACATAGTATGTTTGAAAAGTAAAGGGAATTCCAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CCA 90 bp GTTCTTTTAACAACTTTACCTGGGTCCATCAGAATGTCAAGACACAGTCTTGGTTTCACCTTTTTCTGCTaGTCTTCCCATGTAACTTCT +
Preference number: 4 (lower is better)
Translates to: VLLTTLPGSIRMSRHSLGFTFFC*SSHVTS
Trigger: AGAAGTTACATGGGAAGACCAGCAGAAAAAGGTGAA...ACCAAGACTGTGTCTTGACATTCTGATGGACCCAGGTAAAGTTGTTAAAAGAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000666250.1
CDS-3UTR CCA 90 bp ACTGGAATTCCCTTTACTTTTCAAACATACTATGTACAGGGCAACAACGGTCACTTTCCTGTCTCAGACTaGTGTTTCTTTTTCGGCAAT +
Preference number: 4 (lower is better)
Translates to: TGIPFTFQTYYVQGNNGHFPVSD*CFFFGN
Trigger: ATTGCCGAAAAAGAAACACCAGTCTGAGACAGGAAA...GTGACCGTTGTTGCCCTGTACATAGTATGTTTGAAAAGTAAAGGGAATTCCAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000666250.1
3UTR CAA 72 bp CTGACTGATTCTTTGAGATTAATCCATGGCTTCAGATaGGACCAGAACTCGAGTGTCATTGAATTCCAAATC +
Preference number: 4 (lower is better)
Translates to: LTDSLRLIHGFR*DQNSSVIEFQI
Trigger: GATTTGGAATTCAATGACACTCGAGTTCTGGTCCAATCTGAAGCCATGGATTAATCTCAAAGAATCAGTCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
3UTR CAA 72 bp CTTTACCTGGGTCCATCAGAATGTCAAGACACAGTCTaGGTGTATTTCATATTGCACCACATAAAAAGAAGG +
Preference number: 4 (lower is better)
Translates to: LYLGPSECQDTV*VYFILHHIKRR
Trigger: CCTTCTTTTTATGTGGTGCAATATGAAATACACCAAGACTGTGTCTTGACATTCTGATGGACCCAGGTAAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR TCA 90 bp AGCCACAGAATTTTGTTTTTCAGAGTCCAACACATCTTAGCATTAGTAATTGACCCTATCAGCATAATCTaGTGGAGATCTAGGCATTGC +
Preference number: 4 (lower is better)
Translates to: SHRILFFRVQHILALVIDPISII*WRSRHC
Trigger: GCAATGCCTAGATCTCCATCAGATTATGCTGATAGG...GTCAATTACTAATGCTAAGATGTGTTGGACTCTGAAAAACAAAATTCTGTGGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR TCA 90 bp TCCCAACTGGAATTCCCTTTACTTTTCAAACATACTATGTACAGGGCAACAACGTCGAGTTCTTTCCATTaGATAAGATCGCTGATTTTC +
Preference number: 4 (lower is better)
Translates to: SQLEFPLLFKHTMYRATTSSSFH*IRSLIF
Trigger: GAAAATCAGCGATCTTATTCAATGGAAAGAACTCGA...CGTTGTTGCCCTGTACATAGTATGTTTGAAAAGTAAAGGGAATTCCAGTTGGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR TCA 90 bp ACTGGAATTCCCTTTACTTTTCAAACATACTATGTACAGGGCAACAACGGTCACTCGTCAAATACATGCTaGCTTACTTTAATGTACTCC +
Preference number: 4 (lower is better)
Translates to: TGIPFTFQTYYVQGNNGHSSNTC*LTLMYS
Trigger: GGAGTACATTAAAGTAAGTCAGCATGTATTTGACGA...GTGACCGTTGTTGCCCTGTACATAGTATGTTTGAAAAGTAAAGGGAATTCCAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR TCA 90 bp ACTGGAATTCCCTTTACTTTTCAAACATACTATGTACAGGGCAACAACGGTCACACTTTAACCCCTGTATaGATAATGCTGGTGCTAAAA +
Preference number: 4 (lower is better)
Translates to: TGIPFTFQTYYVQGNNGHTLTPV*IMLVLK
Trigger: TTTTAGCACCAGCATTATTCATACAGGGGTTAAAGT...GTGACCGTTGTTGCCCTGTACATAGTATGTTTGAAAAGTAAAGGGAATTCCAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR TCA 90 bp TCCCAACTGGAATTCCCTTTACTTTTCAAACATACTATGTACAGGGCAACAACGACTTTAACCCCTGTATaGATAATGCTGGTGCTAAAA +
Preference number: 4 (lower is better)
Translates to: SQLEFPLLFKHTMYRATTTLTPV*IMLVLK
Trigger: TTTTAGCACCAGCATTATTCATACAGGGGTTAAAGT...CGTTGTTGCCCTGTACATAGTATGTTTGAAAAGTAAAGGGAATTCCAGTTGGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR TCA 90 bp TCCCAACTGGAATTCCCTTTACTTTTCAAACATACTATGTACAGGGCAACAACGATAAAACCATGCTCCTaGTTTAGTGAGGATTTCTTG +
Preference number: 4 (lower is better)
Translates to: SQLEFPLLFKHTMYRATTIKPCS*FSEDFL
Trigger: CAAGAAATCCTCACTAAATCAGGAGCATGGTTTTAT...CGTTGTTGCCCTGTACATAGTATGTTTGAAAAGTAAAGGGAATTCCAGTTGGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000666250.1
ENST00000668113.1
CDS-3UTR TCA 90 bp ACTGGAATTCCCTTTACTTTTCAAACATACTATGTACAGGGCAACAACGGTCACAACACATTGAGCACATaGTTTTTACGTGCACAGAAT +
Preference number: 4 (lower is better)
Translates to: TGIPFTFQTYYVQGNNGHNTLST*FLRAQN
Trigger: ATTCTGTGCACGTAAAAATCATGTGCTCAATGTGTT...GTGACCGTTGTTGCCCTGTACATAGTATGTTTGAAAAGTAAAGGGAATTCCAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000507740.5
CDS-3UTR TCA 90 bp GTTCTTTTAACAACTTTACCTGGGTCCATCAGAATGTCAAGACACAGTCTTGGTTTGAGACAAACACATTaGGCACATGATTTTTACGTG +
Preference number: 4 (lower is better)
Translates to: VLLTTLPGSIRMSRHSLGLRQTH*AHDFYV
Trigger: CACGTAAAAATCATGTGCTCAATGTGTTTGTCTCAA...ACCAAGACTGTGTCTTGACATTCTGATGGACCCAGGTAAAGTTGTTAAAAGAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000507740.5
CDS-3UTR GCA 90 bp ACTGGAATTCCCTTTACTTTTCAAACATACTATGTACAGGGCAACAACGGTCACGGAAGGGAGATCTTTTaGTCCCAAAATTGTAACTAT +
Preference number: 4 (lower is better)
Translates to: TGIPFTFQTYYVQGNNGHGREIF*SQNCNY
Trigger: ATAGTTACAATTTTGGGAGCAAAAGATCTCCCTTCC...GTGACCGTTGTTGCCCTGTACATAGTATGTTTGAAAAGTAAAGGGAATTCCAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR GCA 90 bp ACTGGAATTCCCTTTACTTTTCAAACATACTATGTACAGGGCAACAACGGTCACACTCCCAAGTCATGTTaGAAAATCCTTTTCAACATG +
Preference number: 4 (lower is better)
Translates to: TGIPFTFQTYYVQGNNGHTPKSC*KILFNM
Trigger: CATGTTGAAAAGGATTTTGCAACATGACTTGGGAGT...GTGACCGTTGTTGCCCTGTACATAGTATGTTTGAAAAGTAAAGGGAATTCCAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR GCA 90 bp AGCCACAGAATTTTGTTTTTCAGAGTCCAACACATCTTAGCATTAGTAATTGACCCTTGGAACTGGGTCTaGTCATGTAGTTTTGGTTTC +
Preference number: 4 (lower is better)
Translates to: SHRILFFRVQHILALVIDPWNWV*SCSFGF
Trigger: GAAACCAAAACTACATGAGCAGACCCAGTTCCAAGG...GTCAATTACTAATGCTAAGATGTGTTGGACTCTGAAAAACAAAATTCTGTGGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000666250.1
ENST00000668113.1
CDS-3UTR GCA 90 bp CTTTTCAAACATACTATGTACAGGGCAACAACGGTCACTGGCATAGTGCTAGTTTATATCCATAGTACCTaGATATCTTCTCCTTGTAGA +
Preference number: 4 (lower is better)
Translates to: LFKHTMYRATTVTGIVLVYIHST*ISSPCR
Trigger: TCTACAAGGAGAAGATATGCAGGTACTATGGATATA...AACTAGCACTATGCCAGTGACCGTTGTTGCCCTGTACATAGTATGTTTGAAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000666250.1
CDS-3UTR GCA 90 bp AGCCACAGAATTTTGTTTTTCAGAGTCCAACACATCTTAGCATTAGTAATTGACTTTTTGAGCACGGACTaGTCCTTCTCCTCTTCTTTC +
Preference number: 4 (lower is better)
Translates to: SHRILFFRVQHILALVIDFLSTD*SFSSSF
Trigger: GAAAGAAGAGGAGAAGGAGCAGTCCGTGCTCAAAAA...GTCAATTACTAATGCTAAGATGTGTTGGACTCTGAAAAACAAAATTCTGTGGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000666250.1
CDS-3UTR CCA 90 bp TCCCAACTGGAATTCCCTTTACTTTTCAAACATACTATGTACAGGGCAACAACGTTCTCTTCGGTGGACTaGAGAATAAATGAATGTTTG +
Preference number: 4 (lower is better)
Translates to: SQLEFPLLFKHTMYRATTFSSVD*RINECL
Trigger: CAAACATTCATTTATTCTCCAGTCCACCGAAGAGAA...CGTTGTTGCCCTGTACATAGTATGTTTGAAAAGTAAAGGGAATTCCAGTTGGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CCA 90 bp ACTGGAATTCCCTTTACTTTTCAAACATACTATGTACAGGGCAACAACGGTCACGTTTCTGTACTTCTTTaGACAGTGCTCCTTAGTTTT +
Preference number: 4 (lower is better)
Translates to: TGIPFTFQTYYVQGNNGHVSVLL*TVLLSF
Trigger: AAAACTAAGGAGCACTGTCCAAAGAAGTACAGAAAC...GTGACCGTTGTTGCCCTGTACATAGTATGTTTGAAAAGTAAAGGGAATTCCAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CCA 90 bp GTTCTTTTAACAACTTTACCTGGGTCCATCAGAATGTCAAGACACAGTCTTGGTTCATCTAAAAGTATCTaGGCCACTCCCATAAAAGAT +
Preference number: 4 (lower is better)
Translates to: VLLTTLPGSIRMSRHSLGSSKSI*ATPIKD
Trigger: ATCTTTTATGGGAGTGGCCCAGATACTTTTAGATGA...ACCAAGACTGTGTCTTGACATTCTGATGGACCCAGGTAAAGTTGTTAAAAGAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CCA 90 bp ACTGGAATTCCCTTTACTTTTCAAACATACTATGTACAGGGCAACAACGGTCACTTTGAGATTAATCCATaGCTTCAGATTGGACCAGAA +
Preference number: 4 (lower is better)
Translates to: TGIPFTFQTYYVQGNNGHFEINP*LQIGPE
Trigger: TTCTGGTCCAATCTGAAGCCATGGATTAATCTCAAA...GTGACCGTTGTTGCCCTGTACATAGTATGTTTGAAAAGTAAAGGGAATTCCAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CCA 90 bp GTTCTTTTAACAACTTTACCTGGGTCCATCAGAATGTCAAGACACAGTCTTGGTATGACTGTCTCTATCTaGAGAATAATGGTCATCCAT +
Preference number: 4 (lower is better)
Translates to: VLLTTLPGSIRMSRHSLGMTVSI*RIMVIH
Trigger: ATGGATGACCATTATTCTCCAGATAGAGACAGTCAT...ACCAAGACTGTGTCTTGACATTCTGATGGACCCAGGTAAAGTTGTTAAAAGAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507740.5
ENST00000666250.1
CDS-3UTR TCA 90 bp AGCCACAGAATTTTGTTTTTCAGAGTCCAACACATCTTAGCATTAGTAATTGACCTGACTGGTCTGAACTaGGAGAATCATTCCTTAACA +
Preference number: 4 (lower is better)
Translates to: SHRILFFRVQHILALVIDLTGLN*ENHSLT
Trigger: TGTTAAGGAATGATTCTCTCAGTTCAGACCAGTCAG...GTCAATTACTAATGCTAAGATGTGTTGGACTCTGAAAAACAAAATTCTGTGGCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR TCA 90 bp AGCCACAGAATTTTGTTTTTCAGAGTCCAACACATCTTAGCATTAGTAATTGACATCACTTATTCTCTTTaGCCTTTGCAACCTCCGTGT +
Preference number: 4 (lower is better)
Translates to: SHRILFFRVQHILALVIDITYSL*PLQPPC
Trigger: ACACGGAGGTTGCAAAGGTCAAAGAGAATAAGTGAT...GTCAATTACTAATGCTAAGATGTGTTGGACTCTGAAAAACAAAATTCTGTGGCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR TCA 90 bp AGCCACAGAATTTTGTTTTTCAGAGTCCAACACATCTTAGCATTAGTAATTGACAATAATGGTCATCCATaGCACGATGTCTGTCCATTC +
Preference number: 4 (lower is better)
Translates to: SHRILFFRVQHILALVIDNNGHP*HDVCPF
Trigger: GAATGGACAGACATCGTGTCATGGATGACCATTATT...GTCAATTACTAATGCTAAGATGTGTTGGACTCTGAAAAACAAAATTCTGTGGCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR TCA 90 bp AGCCACAGAATTTTGTTTTTCAGAGTCCAACACATCTTAGCATTAGTAATTGACATAGTGCTAGTTACATaGCTAAACCACAAGTCGAGG +
Preference number: 4 (lower is better)
Translates to: SHRILFFRVQHILALVIDIVLVT*LNHKSR
Trigger: CCTCGACTTGTGGTTTAGTCATGTAACTAGCACTAT...GTCAATTACTAATGCTAAGATGTGTTGGACTCTGAAAAACAAAATTCTGTGGCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR GCA 90 bp AGCCACAGAATTTTGTTTTTCAGAGTCCAACACATCTTAGCATTAGTAATTGACTCTTCCTCTCTCCTTTaGCTTTCGTATTCATCTCTG +
Preference number: 4 (lower is better)
Translates to: SHRILFFRVQHILALVIDSSSLL*LSYSSL
Trigger: CAGAGATGAATACGAAAGGCAAAGGAGAGAGGAAGA...GTCAATTACTAATGCTAAGATGTGTTGGACTCTGAAAAACAAAATTCTGTGGCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR GCA 90 bp AGCCACAGAATTTTGTTTTTCAGAGTCCAACACATCTTAGCATTAGTAATTGACTTATCACTATGGCTATaGTCCTCGTTAAGGGTTGTG +
Preference number: 4 (lower is better)
Translates to: SHRILFFRVQHILALVIDLSLWL*SSLRVV
Trigger: CACAACCCTTAACGAGGAGCATAGCCATAGTGATAA...GTCAATTACTAATGCTAAGATGTGTTGGACTCTGAAAAACAAAATTCTGTGGCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000668113.1
CDS-3UTR GCA 90 bp AGCCACAGAATTTTGTTTTTCAGAGTCCAACACATCTTAGCATTAGTAATTGACTGTTCTTCCCTGATATaGCCATTTGTCTGCTTTGCA +
Preference number: 4 (lower is better)
Translates to: SHRILFFRVQHILALVIDCSSLI*PFVCFA
Trigger: TGCAAAGCAGACAAATGGGCATATCAGGGAAGAACA...GTCAATTACTAATGCTAAGATGTGTTGGACTCTGAAAAACAAAATTCTGTGGCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000666250.1
CDS-3UTR CCA 90 bp AGCCACAGAATTTTGTTTTTCAGAGTCCAACACATCTTAGCATTAGTAATTGACGTTGTTCTGTTGATCTaGATCTGTGATATGGCTGTC +
Preference number: 4 (lower is better)
Translates to: SHRILFFRVQHILALVIDVVLLI*ICDMAV
Trigger: GACAGCCATATCACAGATCCAGATCAACAGAACAAC...GTCAATTACTAATGCTAAGATGTGTTGGACTCTGAAAAACAAAATTCTGTGGCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CCA 90 bp AGCCACAGAATTTTGTTTTTCAGAGTCCAACACATCTTAGCATTAGTAATTGACCTTTCCAGAGATGATTaGGAAGCTCTTCTTGTCAGA +
Preference number: 4 (lower is better)
Translates to: SHRILFFRVQHILALVIDLSRDD*EALLVR
Trigger: TCTGACAAGAAGAGCTTCCCAATCATCTCTGGAAAG...GTCAATTACTAATGCTAAGATGTGTTGGACTCTGAAAAACAAAATTCTGTGGCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CCA 90 bp AGCCACAGAATTTTGTTTTTCAGAGTCCAACACATCTTAGCATTAGTAATTGACTGTAACACCGCTTCATaGCTGTATAGCTCCATTTCT +
Preference number: 4 (lower is better)
Translates to: SHRILFFRVQHILALVIDCNTAS*LYSSIS
Trigger: AGAAATGGAGCTATACAGCCATGAAGCGGTGTTACA...GTCAATTACTAATGCTAAGATGTGTTGGACTCTGAAAAACAAAATTCTGTGGCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CCA 90 bp GGTGGGACTTTGTCTTATAATCATATGAGCCAATTCTCCCTAATAAACTCCCTTTTCTTTTTCCTGTGCTaGATGATTCCTTTCACTCTT +
Preference number: 4 (lower is better)
Translates to: GGTLSYNHMSQFSLINSLFFFLC*MIPFTL
Trigger: AAGAGTGAAAGGAATCATCCAGCACAGGAAAAAGAA...AAGGGAGTTTATTAGGGAGAATTGGCTCATATGATTATAAGACAAAGTCCCACC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000507677.5
CDS-3UTR TCA 90 bp AGCCACAGAATTTTGTTTTTCAGAGTCCAACACATCTTAGCATTAGTAATTGACGCACAAAAGATTATGTaGCTGCATCTTAGTATCAGG +
Preference number: 4 (lower is better)
Translates to: SHRILFFRVQHILALVIDAQKIM*LHLSIR
Trigger: CCTGATACTAAGATGCAGTCACATAATCTTTTGTGC...GTCAATTACTAATGCTAAGATGTGTTGGACTCTGAAAAACAAAATTCTGTGGCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR GCA 90 bp AGCCACAGAATTTTGTTTTTCAGAGTCCAACACATCTTAGCATTAGTAATTGACGAAAAGGGCTTCTGTTaGATGAAACTGACTGATTCT +
Preference number: 4 (lower is better)
Translates to: SHRILFFRVQHILALVIDEKGFC*MKLTDS
Trigger: AGAATCAGTCAGTTTCATGCAACAGAAGCCCTTTTC...GTCAATTACTAATGCTAAGATGTGTTGGACTCTGAAAAACAAAATTCTGTGGCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CCA 90 bp AGCCACAGAATTTTGTTTTTCAGAGTCCAACACATCTTAGCATTAGTAATTGACGTCAAGACACAGTCTTaGTGTATTTCATATTGCACC +
Preference number: 4 (lower is better)
Translates to: SHRILFFRVQHILALVIDVKTQS*CISYCT
Trigger: GGTGCAATATGAAATACACCAAGACTGTGTCTTGAC...GTCAATTACTAATGCTAAGATGTGTTGGACTCTGAAAAACAAAATTCTGTGGCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR TCA 90 bp AGCCACAGAATTTTGTTTTTCAGAGTCCAACACATCTTAGCATTAGTAATTGACGAACTCGAGTGTCATTaGATTCCAAATCTGATAGTT +
Preference number: 4 (lower is better)
Translates to: SHRILFFRVQHILALVIDELECH*IPNLIV
Trigger: AACTATCAGATTTGGAATTCAATGACACTCGAGTTC...GTCAATTACTAATGCTAAGATGTGTTGGACTCTGAAAAACAAAATTCTGTGGCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR TCA 90 bp AGCCACAGAATTTTGTTTTTCAGAGTCCAACACATCTTAGCATTAGTAATTGACATAAAACCATGCTCCTaGTTTAGTGAGGATTTCTTG +
Preference number: 4 (lower is better)
Translates to: SHRILFFRVQHILALVIDIKPCS*FSEDFL
Trigger: CAAGAAATCCTCACTAAATCAGGAGCATGGTTTTAT...GTCAATTACTAATGCTAAGATGTGTTGGACTCTGAAAAACAAAATTCTGTGGCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000666250.1
ENST00000668113.1
CDS-3UTR GCA 90 bp AGCCACAGAATTTTGTTTTTCAGAGTCCAACACATCTTAGCATTAGTAATTGACACTCCCAAGTCATGTTaGAAAATCCTTTTCAACATG +
Preference number: 4 (lower is better)
Translates to: SHRILFFRVQHILALVIDTPKSC*KILFNM
Trigger: CATGTTGAAAAGGATTTTGCAACATGACTTGGGAGT...GTCAATTACTAATGCTAAGATGTGTTGGACTCTGAAAAACAAAATTCTGTGGCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CCA 90 bp AGCCACAGAATTTTGTTTTTCAGAGTCCAACACATCTTAGCATTAGTAATTGACTTCTCTTCGGTGGACTaGAGAATAAATGAATGTTTG +
Preference number: 4 (lower is better)
Translates to: SHRILFFRVQHILALVIDFSSVD*RINECL
Trigger: CAAACATTCATTTATTCTCCAGTCCACCGAAGAGAA...GTCAATTACTAATGCTAAGATGTGTTGGACTCTGAAAAACAAAATTCTGTGGCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CCA 90 bp AGCCACAGAATTTTGTTTTTCAGAGTCCAACACATCTTAGCATTAGTAATTGACTTGATCAGGTTGCTGTaGTGTATTAGATCCACTATT +
Preference number: 4 (lower is better)
Translates to: SHRILFFRVQHILALVIDLIRLL*CIRSTI
Trigger: AATAGTGGATCTAATACACCACAGCAACCTGATCAA...GTCAATTACTAATGCTAAGATGTGTTGGACTCTGAAAAACAAAATTCTGTGGCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CCA 90 bp AGCCACAGAATTTTGTTTTTCAGAGTCCAACACATCTTAGCATTAGTAATTGACAAGAAGGGACTCGCATaGATCATTATTGAGAAAAGT +
Preference number: 4 (lower is better)
Translates to: SHRILFFRVQHILALVIDKKGLA*IIIEKS
Trigger: ACTTTTCTCAATAATGATCCATGCGAGTCCCTTCTT...GTCAATTACTAATGCTAAGATGTGTTGGACTCTGAAAAACAAAATTCTGTGGCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000507740.5
3UTR CAA 72 bp TCAACTATTATTTCCGTGATTCTTATTCCATTAAGCTaGTCTGTACTTAACCAGGTTGATCAGAGATTTCCA +
Preference number: 4 (lower is better)
Translates to: STIISVILIPLS*SVLNQVDQRFP
Trigger: TGGAAATCTCTGATCAACCTGGTTAAGTACAGACAAGCTTAATGGAATAAGAATCACGGAAATAATAGTTGA
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507677.5
CDS CCA 90 bp GGTCAGGCATCTCGGGCTGCAGAGGCGGCTGAGAGGCCGCCGGGATaGGAGCCAGGCGGCCCCGGGGCCCGACAGGAGCCGACATGTTTG +
Preference number: 5 (lower is better)
Translates to: GQASRAAEAAERPPG*EPGGPGARQEPTCL
Trigger: CAAACATGTCGGCTCCTGTCGGGCCCCGGGGCCGCCTGGCTCCCATCCCGGCGGCCTCTCAGCCGCCTCTGCAGCCCGAGATGCCTGACC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000504942.6
ENST00000632716.1
ENST00000666250.1
ENST00000668113.1
CDS CCA 90 bp TGGACGAGGACCCGCTTTTCCCGCGGTACAAGATACGCGGCGTCTTaGCGGCTGGGGCGCAGCGTCCGCAGCGGTTCCGGGACCAGTGGG +
Preference number: 5 (lower is better)
Translates to: WTRTRFSRGTRYAAS*RLGRSVRSGSGTSG
Trigger: CCCACTGGTCCCGGAACCGCTGCGGACGCTGCGCCCCAGCCGCCAAGACGCCGCGTATCTTGTACCGCGGGAAAAGCGGGTCCTCGTCCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339750.3
ENST00000523362.5
CDS CCA 90 bp CCGGAGGAGACGTGGCTTTCCTGGCCGCCGGGACCTCCAATTTATTaGAGAGGGGTCCAGAGGAGGAGATGGAGGCGGTGGCGGGCGGAG +
Preference number: 5 (lower is better)
Translates to: PEETWLSWPPGPPIY*RGVQRRRWRRWRAE
Trigger: CTCCGCCCGCCACCGCCTCCATCTCCTCCTCTGGACCCCTCTCCAATAAATTGGAGGTCCCGGCGGCCAGGAAAGCCACGTCTCCTCCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339750.3
ENST00000523362.5
CDS-3UTR CAA 90 bp GAACTCTGCAGGGTTTCCTTCTCCCAGTTGAGGAATCGCCCCAGAAGGATATGGCACCCATTGCAGGTGTaGCCAGAGTCTGGCGTCCCA +
Preference number: 5 (lower is better)
Translates to: ELCRVSFSQLRNRPRRIWHPLQV*PESGVP
Trigger: TGGGACGCCAGACTCTGGCAACACCTGCAATGGGTG...CCATATCCTTCTGGGGCGATTCCTCAACTGGGAGAAGGAAACCCTGCAGAGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507740.5
CDS CCA 90 bp CGCTTTTTGCCACTGGTGCCCAAGGTGCCCACTGCAGTGTCAGACTaGCTGCCATCATTCTTCTCCAGTGAGCACATGTCTCCACTGATG +
Preference number: 5 (lower is better)
Translates to: RFLPLVPKVPTAVSD*LPSFFSSEHMSPLM
Trigger: CATCAGTGGAGACATGTGCTCACTGGAGAAGAATGATGGCAGCCAGTCTGACACTGCAGTGGGCACCTTGGGCACCAGTGGCAAAAAGCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000408894.6
ENST00000436393.6
ENST00000666250.1
CDS-3UTR CAA 90 bp GGACTCTGGAACTTGCACCAGTGGCTTGCTGGTGGCTCTCAGGCCTTTGACCACAGAACTGGACTCCAGTaGTGCATGTGTGCTATCAGG +
Preference number: 5 (lower is better)
Translates to: GLWNLHQWLAGGSQAFDHRTGLQ*CMCAIR
Trigger: CCTGATAGCACACATGCACAACTGGAGTCCAGTTCT...GTGGTCAAAGGCCTGAGAGCCACCAGCAAGCCACTGGTGCAAGTTCCAGAGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507677.5
CDS-3UTR CAA 90 bp ATTACACTCCTCACCTGTAACACCGCTTCATGGCTGTATAGCTCCATTTCTGTGAAGATACGCGGCGTCTaGGCGGCTGGGGCGCAGCGT +
Preference number: 5 (lower is better)
Translates to: ITLLTCNTASWLYSSISVKIRGV*AAGAQR
Trigger: ACGCTGCGCCCCAGCCGCCAAGACGCCGCGTATCTT...CACAGAAATGGAGCTATACAGCCATGAAGCGGTGTTACAGGTGAGGAGTGTAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339750.3
CDS CCA 90 bp AGCGGGTGGTGGTCCGCTCAAGGAGAGGCCGTTGTTCTGTTGATCTaGATCTGTGATATGGCTGTCTATCTGCTGCTTCACAATCCCTGC +
Preference number: 5 (lower is better)
Translates to: SGWWSAQGEAVVLLI*ICDMAVYLLLHNPC
Trigger: GCAGGGATTGTGAAGCAGCAGATAGACAGCCATATCACAGATCCAGATCAACAGAACAACGGCCTCTCCTTGAGCGGACCACCACCCGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000408894.6
ENST00000507740.5
ENST00000632716.1
ENST00000666250.1
CDS TCA 90 bp TCTGGAGCGGGTGGTGGTCCGCTCAAGGAGAGGCCGTTGTTCTGTTaGTCTGGATCTGTGATATGGCTGTCTATCTGCTGCTTCACAATC +
Preference number: 5 (lower is better)
Translates to: SGAGGGPLKERPLFC*SGSVIWLSICCFTI
Trigger: GATTGTGAAGCAGCAGATAGACAGCCATATCACAGATCCAGATCAACAGAACAACGGCCTCTCCTTGAGCGGACCACCACCCGCTCCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000262231.14
ENST00000408894.6
ENST00000504942.6
ENST00000507740.5
ENST00000632716.1
ENST00000666250.1
ENST00000668113.1
CDS TCA 90 bp GTGGTCCGCTCAAGGAGAGGCCGTTGTTCTGTTGATCTGGATCTGTaGTATGGCTGTCTATCTGCTGCTTCACAATCCCTGCCATCCCTG +
Preference number: 5 (lower is better)
Translates to: VVRSRRGRCSVDLDL*YGCLSAASQSLPSL
Trigger: CAGGGATGGCAGGGATTGTGAAGCAGCAGATAGACAGCCATATCACAGATCCAGATCAACAGAACAACGGCCTCTCCTTGAGCGGACCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000408894.6
ENST00000507740.5
ENST00000632716.1
ENST00000666250.1
CDS TCA 90 bp TCCTGCTTCCGTTTGGCTGAGCTGAGAAGCACTGCGACTTTTCCGTaGCAGACCAACGATAGCTACCATTTTGGCACCAAGGCTAGAGCG +
Preference number: 5 (lower is better)
Translates to: SCFRLAELRSTATFP*QTNDSYHFGTKARA
Trigger: CGCTCTAGCCTTGGTGCCAAAATGGTAGCTATCGTTGGTCTGTCACGGAAAAGTCGCAGTGCTTCTCAGCTCAGCCAAACGGAAGCAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000408894.6
ENST00000436393.6
ENST00000666250.1
CDS CCA 90 bp AGCGGGTGGTGGTCCGCTCAAGGAGAGGCCGTTGTTCTGTTGATCTaGATCTGTGATATGGCTGTCTATCTGCTGCTTCACAATCCCTGT +
Preference number: 5 (lower is better)
Translates to: SGWWSAQGEAVVLLI*ICDMAVYLLLHNPC
Trigger: ACAGGGATTGTGAAGCAGCAGATAGACAGCCATATCACAGATCCAGATCAACAGAACAACGGCCTCTCCTTGAGCGGACCACCACCCGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262231.14
ENST00000504942.6
ENST00000668113.1
CDS-3UTR CAA 90 bp CTGAAGCAGACTCCCATGAGAACTCTGCAGGGTTTCCTTCTCCCAGTTGAGGAACTGCGACTGGAGTACTaGATGGGCTTGTCTGGACAG +
Preference number: 5 (lower is better)
Translates to: LKQTPMRTLQGFLLPVEELRLEY*MGLSGQ
Trigger: CTGTCCAGACAAGCCCATCAAGTACTCCAGTCGCAG...TTCCTCAACTGGGAGAAGGAAACCCTGCAGAGTTCTCATGGGAGTCTGCTTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507740.5
CDS-3UTR CAA 90 bp TGGAACAAAGCGGGTGAAGAAGGTGGGATAACCTTGCTTGCTAAGTTTTCTGGCACTTGCACCAGTGGCTaGCTGGTGGCTCTCAGGCCT +
Preference number: 5 (lower is better)
Translates to: WNKAGEEGGITLLAKFSGTCTSG*LVALRP
Trigger: AGGCCTGAGAGCCACCAGCAAGCCACTGGTGCAAGT...GCCAGAAAACTTAGCAAGCAAGGTTATCCCACCTTCTTCACCCGCTTTGTTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507677.5
CDS TCA 90 bp AAGGAGGGGCAGATCTTCCAGTCATTAATGAAGGCATCGACCTCATaGGGTTTGTATCAGGACGTTCAGTGGATCTGGAGCGGGTGGTGG +
Preference number: 5 (lower is better)
Translates to: KEGQIFQSLMKASTS*GLYQDVQWIWSGWW
Trigger: CCACCACCCGCTCCAGATCCACTGAACGTCCTGATACAAACCTCATGAGGTCGATGCCTTCATTAATGACTGGAAGATCTGCCCCTCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262231.14
ENST00000408894.6
ENST00000504942.6
ENST00000507740.5
ENST00000632716.1
ENST00000666250.1
ENST00000668113.1
CDS CCA 90 bp CTTATTCTCTTTGACCTTTGCAACCTCCGTGTTGGGCTCTCTCCATaGAGCTGTCTTCGTGGCATATATGGAGAAGGGTGGGGAAGTGGC +
Preference number: 5 (lower is better)
Translates to: LILFDLCNLRVGLSP*SCLRGIYGEGWGSG
Trigger: GCCACTTCCCCACCCTTCTCCATATATGCCACGAAGACAGCTCCATGGAGAGAGCCCAACACGGAGGTTGCAAAGGTCAAAGAGAATAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000262231.14
ENST00000408894.6
ENST00000436393.6
ENST00000504942.6
ENST00000507677.5
ENST00000507740.5
ENST00000632716.1
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CAA 90 bp CACAGAACCCTGAGGGCATCACGAGCTGAGGGAGTTGAGACAAACACATTGAGCTATCCAACGTTCCCTTaGGTGGAAGCTGTGGAAGCT +
Preference number: 5 (lower is better)
Translates to: HRTLRASRAEGVETNTLSYPTFP*VEAVEA
Trigger: AGCTTCCACAGCTTCCACCAAAGGGAACGTTGGATA...GCTCAATGTGTTTGTCTCAACTCCCTCAGCTCGTGATGCCCTCAGGGTTCTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507740.5
CDS-3UTR CAA 90 bp GTTCTTTTAACAACTTTACCTGGGTCCATCAGAATGTCAAGACACAGTCTTGGTGGGCCAGAAGCCAGGTaGGTGCCACGGGACCCTGAG +
Preference number: 5 (lower is better)
Translates to: VLLTTLPGSIRMSRHSLGGPEAR*VPRDPE
Trigger: CTCAGGGTCCCGTGGCACCAACCTGGCTTCTGGCCC...ACCAAGACTGTGTCTTGACATTCTGATGGACCCAGGTAAAGTTGTTAAAAGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339750.3
CDS-3UTR CAA 90 bp CCTGTCCTGTCAGCTTCCCTGGTTTTAAGCCTTTCAAAATGGACTCACACTTGGTTTGCAACCTCCGTGTaGGGCTCTCTCCATGGAGCT +
Preference number: 5 (lower is better)
Translates to: PVLSASLVLSLSKWTHTWFATSV*GSLHGA
Trigger: AGCTCCATGGAGAGAGCCCAACACGGAGGTTGCAAA...CCAAGTGTGAGTCCATTTTGAAAGGCTTAAAACCAGGGAAGCTGACAGGACAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507677.5
CDS-3UTR CAA 90 bp CACAGAACCCTGAGGGCATCACGAGCTGAGGGAGTTGAGACAAACACATTGAGCGAGGCCGTTGTTCTGTaGATCTGGATCTGTGATATG +
Preference number: 5 (lower is better)
Translates to: HRTLRASRAEGVETNTLSEAVVL*IWICDM
Trigger: CATATCACAGATCCAGATCAACAGAACAACGGCCTC...GCTCAATGTGTTTGTCTCAACTCCCTCAGCTCGTGATGCCCTCAGGGTTCTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507740.5
CDS TCA 90 bp GTGGTCCGCTCAAGGAGAGGCCGTTGTTCTGTTGATCTGGATCTGTaGTATGGCTGTCTATCTGCTGCTTCACAATCCCTGTCTCTATCT +
Preference number: 5 (lower is better)
Translates to: VVRSRRGRCSVDLDL*YGCLSAASQSLSLS
Trigger: AGATAGAGACAGGGATTGTGAAGCAGCAGATAGACAGCCATATCACAGATCCAGATCAACAGAACAACGGCCTCTCCTTGAGCGGACCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262231.14
ENST00000504942.6
ENST00000668113.1
CDS CCA 90 bp TCGGGACACTTCAGCATGGATCCGCATTTGTTCTTCATAGGGTTGTaGCTTTACTGGATAACGGGCCAAATTCGGATCACTTCGGTAGCG +
Preference number: 5 (lower is better)
Translates to: SGHFSMDPHLFFIGL*LYWITGQIRITSVA
Trigger: CGCTACCGAAGTGATCCGAATTTGGCCCGTTATCCAGTAAAGCCACAACCCTATGAAGAACAAATGCGGATCCATGCTGAAGTGTCCCGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000262231.14
ENST00000408894.6
ENST00000436393.6
ENST00000504942.6
ENST00000507740.5
ENST00000515551.5
ENST00000632716.1
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CAA 90 bp GAACTCTGCAGGGTTTCCTTCTCCCAGTTGAGGAATCGCCCCAGAAGGATATGGATGGTTTGTGGTCCTTaGTGCATAAGAACTTGGTCC +
Preference number: 5 (lower is better)
Translates to: ELCRVSFSQLRNRPRRIWMVCGP*CIRTWS
Trigger: GGACCAAGTTCTTATGCACAAAGGACCACAAACCAT...CCATATCCTTCTGGGGCGATTCCTCAACTGGGAGAAGGAAACCCTGCAGAGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507740.5
CDS-3UTR CAA 90 bp GGTTTAGTCAGGAGTTGCCGAAAGAGCTCATTCGTGAGCTGGGAGTTGCAAGAACCTTCAAGCCAAGCATaGCTCCTGAATCTCGAGGTA +
Preference number: 5 (lower is better)
Translates to: GLVRSCRKSSFVSWELQEPSSQA*LLNLEV
Trigger: TACCTCGAGATTCAGGAGCAATGCTTGGCTTGAAGG...TTCTTGCAACTCCCAGCTCACGAATGAGCTCTTTCGGCAACTCCTGACTAAACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507740.5
CDS-3UTR CAA 90 bp ATTACACTCCTCACCTGTAACACCGCTTCATGGCTGTATAGCTCCATTTCTGTGTCAGAGGGGCCAAGGTaGGATCTACTAGGGAGGAAG +
Preference number: 5 (lower is better)
Translates to: ITLLTCNTASWLYSSISVSEGPR*DLLGRK
Trigger: CTTCCTCCCTAGTAGATCCAACCTTGGCCCCTCTGA...CACAGAAATGGAGCTATACAGCCATGAAGCGGTGTTACAGGTGAGGAGTGTAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS GCA 90 bp ATGGTTGCCAGGTTACAGGGTGCAAAGACATTGGGGATGCCTCACTaGTATGCCAAGACGTATGATCCAACCAGTTGTAATCCATGTCTC +
Preference number: 5 (lower is better)
Translates to: MVARLQGAKTLGMPH*YAKTYDPTSCNPCL
Trigger: GAGACATGGATTACAACTGGTTGGATCATACGTCTTGGCATAGCAGTGAGGCATCCCCAATGTCTTTGCACCCTGTAACCTGGCAACCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000408894.6
ENST00000436393.6
ENST00000504942.6
ENST00000507740.5
ENST00000515551.5
ENST00000632716.1
ENST00000666250.1
CDS-3UTR CAA 90 bp GAACTCTGCAGGGTTTCCTTCTCCCAGTTGAGGAATCGCCCCAGAAGGATATGGTTGTTCTTCATAGGGTaGTGGCTTTACTGGATAACG +
Preference number: 5 (lower is better)
Translates to: ELCRVSFSQLRNRPRRIWLFFIG*WLYWIT
Trigger: CGTTATCCAGTAAAGCCACAACCCTATGAAGAACAA...CCATATCCTTCTGGGGCGATTCCTCAACTGGGAGAAGGAAACCCTGCAGAGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507740.5
CDS-3UTR CAA 90 bp AGAAACAGGCTCAGAAGACACAACATTAAGCATGCAGTGTTACCAGGGTTTGCATTTGCAACCTCCGTGTaGGGCTCTCTCCATGGAGCT +
Preference number: 5 (lower is better)
Translates to: RNRLRRHNIKHAVLPGFAFATSV*GSLHGA
Trigger: AGCTCCATGGAGAGAGCCCAACACGGAGGTTGCAAA...TGCAAACCCTGGTAACACTGCATGCTTAATGTTGTGTCTTCTGAGCCTGTTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CAA 90 bp CTGAAGCAGACTCCCATGAGAACTCTGCAGGGTTTCCTTCTCCCAGTTGAGGAACTGGCACTGATAATGTaGAGCTTTGAAGATCTCGAC +
Preference number: 5 (lower is better)
Translates to: LKQTPMRTLQGFLLPVEELALIM*SFEDLD
Trigger: GTCGAGATCTTCAAAGCTCAACATTATCAGTGCCAG...TTCCTCAACTGGGAGAAGGAAACCCTGCAGAGTTCTCATGGGAGTCTGCTTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507740.5
CDS-3UTR CAA 90 bp AGAAACAGGCTCAGAAGACACAACATTAAGCATGCAGTGTTACCAGGGTTTGCATTCCACATTCCGACTTaGTGGAGGAGGGACACTGGG +
Preference number: 5 (lower is better)
Translates to: RNRLRRHNIKHAVLPGFAFHIPT*WRRDTG
Trigger: CCCAGTGTCCCTCCTCCACAAAGTCGGAATGTGGAA...TGCAAACCCTGGTAACACTGCATGCTTAATGTTGTGTCTTCTGAGCCTGTTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CAA 90 bp GTTCTTTTAACAACTTTACCTGGGTCCATCAGAATGTCAAGACACAGTCTTGGTCACCCATTGCAGGTGTaGCCAGAGTCTGGCGTCCCA +
Preference number: 5 (lower is better)
Translates to: VLLTTLPGSIRMSRHSLGHPLQV*PESGVP
Trigger: TGGGACGCCAGACTCTGGCAACACCTGCAATGGGTG...ACCAAGACTGTGTCTTGACATTCTGATGGACCCAGGTAAAGTTGTTAAAAGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CAA 90 bp ATTACACTCCTCACCTGTAACACCGCTTCATGGCTGTATAGCTCCATTTCTGTGCCTGAATGTCACCCATaGCAGGTGTTGCCAGAGTCT +
Preference number: 5 (lower is better)
Translates to: ITLLTCNTASWLYSSISVPECHP*QVLPES
Trigger: AGACTCTGGCAACACCTGCAATGGGTGACATTCAGG...CACAGAAATGGAGCTATACAGCCATGAAGCGGTGTTACAGGTGAGGAGTGTAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CAA 90 bp ATTACACTCCTCACCTGTAACACCGCTTCATGGCTGTATAGCTCCATTTCTGTGATTGGGAAGCTCTTCTaGTCAGAGGGGCCAAGGTTG +
Preference number: 5 (lower is better)
Translates to: ITLLTCNTASWLYSSISVIGKLF*SEGPRL
Trigger: CAACCTTGGCCCCTCTGACAAGAAGAGCTTCCCAAT...CACAGAAATGGAGCTATACAGCCATGAAGCGGTGTTACAGGTGAGGAGTGTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CAA 90 bp ATATGGAGAAATCCTCTCACCCATTCATATCCACACGTAGAAGCTAGTCTCCGGATTGGGAAGCTCTTCTaGTCAGAGGGGCCAAGGTTG +
Preference number: 5 (lower is better)
Translates to: IWRNPLTHSYPHVEASLRIGKLF*SEGPRL
Trigger: CAACCTTGGCCCCTCTGACAAGAAGAGCTTCCCAAT...CCGGAGACTAGCTTCTACGTGTGGATATGAATGGGTGAGAGGATTTCTCCATAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507740.5
CDS-3UTR CAA 90 bp GGTTTAGTCAGGAGTTGCCGAAAGAGCTCATTCGTGAGCTGGGAGTTGCAAGAATTCCTGACCACTTCTTaGGTCTCCTGCTTTTCACCT +
Preference number: 5 (lower is better)
Translates to: GLVRSCRKSSFVSWELQEFLTTS*VSCFSP
Trigger: AGGTGAAAAGCAGGAGACCAAAGAAGTGGTCAGGAA...TTCTTGCAACTCCCAGCTCACGAATGAGCTCTTTCGGCAACTCCTGACTAAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507740.5
CDS-3UTR CAA 90 bp ACTGGAATTCCCTTTACTTTTCAAACATACTATGTACAGGGCAACAACGGTCACCTAGAGCGCCGCTTTTaGCCACTGGTGCCCAAGGTG +
Preference number: 5 (lower is better)
Translates to: TGIPFTFQTYYVQGNNGHLERRF*PLVPKV
Trigger: CACCTTGGGCACCAGTGGCAAAAAGCGGCGCTCTAG...GTGACCGTTGTTGCCCTGTACATAGTATGTTTGAAAAGTAAAGGGAATTCCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000666250.1
CDS-3UTR CAA 90 bp GAACTCTGCAGGGTTTCCTTCTCCCAGTTGAGGAATCGCCCCAGAAGGATATGGTCATATCCTTTATTGTaGCCTATGGAGCCTTGGCAT +
Preference number: 5 (lower is better)
Translates to: ELCRVSFSQLRNRPRRIWSYPLL*PMEPWH
Trigger: ATGCCAAGGCTCCATAGGCAACAATAAAGGATATGA...CCATATCCTTCTGGGGCGATTCCTCAACTGGGAGAAGGAAACCCTGCAGAGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507740.5
CDS-3UTR CAA 90 bp GTTCTTTTAACAACTTTACCTGGGTCCATCAGAATGTCAAGACACAGTCTTGGTCAGGAGCCGACATGTTaGGTGGAGCCGAACCACCCT +
Preference number: 5 (lower is better)
Translates to: VLLTTLPGSIRMSRHSLGQEPTC*VEPNHP
Trigger: AGGGTGGTTCGGCTCCACCAAACATGTCGGCTCCTG...ACCAAGACTGTGTCTTGACATTCTGATGGACCCAGGTAAAGTTGTTAAAAGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CAA 90 bp TCCCAACTGGAATTCCCTTTACTTTTCAAACATACTATGTACAGGGCAACAACGCAGGAGCCGACATGTTaGGTGGAGCCGAACCACCCT +
Preference number: 5 (lower is better)
Translates to: SQLEFPLLFKHTMYRATTQEPTC*VEPNHP
Trigger: AGGGTGGTTCGGCTCCACCAAACATGTCGGCTCCTG...CGTTGTTGCCCTGTACATAGTATGTTTGAAAAGTAAAGGGAATTCCAGTTGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000666250.1
ENST00000668113.1
CDS TCA 90 bp TGGCTTTACTGGATAACGGGCCAAATTCGGATCACTTCGGTAGCGTaGCTGGTACTCTTCCTCTCTCCTTTGCCTTTCGTATTCATCTCT +
Preference number: 5 (lower is better)
Translates to: WLYWITGQIRITSVA*LVLFLSPLPFVFIS
Trigger: AGAGATGAATACGAAAGGCAAAGGAGAGAGGAAGAGTACCAGTCACGCTACCGAAGTGATCCGAATTTGGCCCGTTATCCAGTAAAGCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000262231.14
ENST00000408894.6
ENST00000436393.6
ENST00000504942.6
ENST00000507740.5
ENST00000515551.5
ENST00000632716.1
ENST00000666250.1
ENST00000668113.1
CDS GCA 90 bp ATCAGCATTTGCCAAAGAAACATCACTATGCCTTCTCTCATGCCGTaGTCGGGACACTTCAGCATGGATCCGCATTTGTTCTTCATAGGG +
Preference number: 5 (lower is better)
Translates to: ISICQRNITMPSLMP*SGHFSMDPHLFFIG
Trigger: CCCTATGAAGAACAAATGCGGATCCATGCTGAAGTGTCCCGAGCACGGCATGAGAGAAGGCATAGTGATGTTTCTTTGGCAAATGCTGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000262231.14
ENST00000408894.6
ENST00000436393.6
ENST00000504942.6
ENST00000507740.5
ENST00000515551.5
ENST00000632716.1
ENST00000666250.1
ENST00000668113.1
CDS GCA 90 bp TCCAGATCAGCATTTGCCAAAGAAACATCACTATGCCTTCTCTCATaGCGTGCTCGGGACACTTCAGCATGGATCCGCATTTGTTCTTCA +
Preference number: 5 (lower is better)
Translates to: SRSAFAKETSLCLLS*RARDTSAWIRICSS
Trigger: TGAAGAACAAATGCGGATCCATGCTGAAGTGTCCCGAGCACGGCATGAGAGAAGGCATAGTGATGTTTCTTTGGCAAATGCTGATCTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000262231.14
ENST00000408894.6
ENST00000436393.6
ENST00000504942.6
ENST00000507740.5
ENST00000515551.5
ENST00000632716.1
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CAA 90 bp CTTTTCAAACATACTATGTACAGGGCAACAACGGTCACTGGCATAGTGCTAGTTTTTGCAACCTCCGTGTaGGGCTCTCTCCATGGAGCT +
Preference number: 5 (lower is better)
Translates to: LFKHTMYRATTVTGIVLVFATSV*GSLHGA
Trigger: AGCTCCATGGAGAGAGCCCAACACGGAGGTTGCAAA...AACTAGCACTATGCCAGTGACCGTTGTTGCCCTGTACATAGTATGTTTGAAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CAA 90 bp AGAAACAGGCTCAGAAGACACAACATTAAGCATGCAGTGTTACCAGGGTTTGCAGAGTACTTGATGGGCTaGTCTGGACAGACCCAGTAC +
Preference number: 5 (lower is better)
Translates to: RNRLRRHNIKHAVLPGFAEYLMG*SGQTQY
Trigger: GTACTGGGTCTGTCCAGACAAGCCCATCAAGTACTC...TGCAAACCCTGGTAACACTGCATGCTTAATGTTGTGTCTTCTGAGCCTGTTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CAA 90 bp ATTACACTCCTCACCTGTAACACCGCTTCATGGCTGTATAGCTCCATTTCTGTGTATCCAACGTTCCCTTaGGTGGAAGCTGTGGAAGCT +
Preference number: 5 (lower is better)
Translates to: ITLLTCNTASWLYSSISVYPTFP*VEAVEA
Trigger: AGCTTCCACAGCTTCCACCAAAGGGAACGTTGGATA...CACAGAAATGGAGCTATACAGCCATGAAGCGGTGTTACAGGTGAGGAGTGTAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CAA 90 bp ATTACACTCCTCACCTGTAACACCGCTTCATGGCTGTATAGCTCCATTTCTGTGGGTGCTGGCAGTGTCTaGGAACCTGGTTTTACAACA +
Preference number: 5 (lower is better)
Translates to: ITLLTCNTASWLYSSISVGAGSV*EPGFTT
Trigger: TGTTGTAAAACCAGGTTCCAAGACACTGCCAGCACC...CACAGAAATGGAGCTATACAGCCATGAAGCGGTGTTACAGGTGAGGAGTGTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CAA 90 bp CTTTTCAAACATACTATGTACAGGGCAACAACGGTCACTGGCATAGTGCTAGTTTCAGAGGGGCCAAGGTaGGATCTACTAGGGAGGAAG +
Preference number: 5 (lower is better)
Translates to: LFKHTMYRATTVTGIVLVSEGPR*DLLGRK
Trigger: CTTCCTCCCTAGTAGATCCAACCTTGGCCCCTCTGA...AACTAGCACTATGCCAGTGACCGTTGTTGCCCTGTACATAGTATGTTTGAAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CAA 90 bp AGCCACAGAATTTTGTTTTTCAGAGTCCAACACATCTTAGCATTAGTAATTGACCCCTGCCGGCCCATCTaGGACGAGGACCCGCTTTTC +
Preference number: 5 (lower is better)
Translates to: SHRILFFRVQHILALVIDPCRPI*DEDPLF
Trigger: GAAAAGCGGGTCCTCGTCCAAGATGGGCCGGCAGGG...GTCAATTACTAATGCTAAGATGTGTTGGACTCTGAAAAACAAAATTCTGTGGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000339750.3
CDS-3UTR CAA 90 bp CACAGAACCCTGAGGGCATCACGAGCTGAGGGAGTTGAGACAAACACATTGAGCAATATAAAGGTGCCATaGAAAAGGGCTTCTGTTGCA +
Preference number: 5 (lower is better)
Translates to: HRTLRASRAEGVETNTLSNIKVP*KRASVA
Trigger: TGCAACAGAAGCCCTTTTCAATGGCACCTTTATATT...GCTCAATGTGTTTGTCTCAACTCCCTCAGCTCGTGATGCCCTCAGGGTTCTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507740.5
CDS-3UTR CAA 90 bp AGAAACAGGCTCAGAAGACACAACATTAAGCATGCAGTGTTACCAGGGTTTGCAACGATAGCTACCATTTaGGCACCAAGGCTAGAGCGC +
Preference number: 5 (lower is better)
Translates to: RNRLRRHNIKHAVLPGFATIATI*APRLER
Trigger: GCGCTCTAGCCTTGGTGCCAAAATGGTAGCTATCGT...TGCAAACCCTGGTAACACTGCATGCTTAATGTTGTGTCTTCTGAGCCTGTTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000666250.1
CDS-3UTR CAA 90 bp CTTTTCAAACATACTATGTACAGGGCAACAACGGTCACTGGCATAGTGCTAGTTACCTCCTGCTTCCGTTaGGCTGAGCTGAGAAGCACT +
Preference number: 5 (lower is better)
Translates to: LFKHTMYRATTVTGIVLVTSCFR*AELRST
Trigger: AGTGCTTCTCAGCTCAGCCAAACGGAAGCAGGAGGT...AACTAGCACTATGCCAGTGACCGTTGTTGCCCTGTACATAGTATGTTTGAAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000666250.1
CDS-3UTR CAA 90 bp ATTACACTCCTCACCTGTAACACCGCTTCATGGCTGTATAGCTCCATTTCTGTGTGTTCTTCTTTGACCTaGAGCACGGACTGCTCCTTC +
Preference number: 5 (lower is better)
Translates to: ITLLTCNTASWLYSSISVCSSLT*STDCSF
Trigger: GAAGGAGCAGTCCGTGCTCAAGGTCAAAGAAGAACA...CACAGAAATGGAGCTATACAGCCATGAAGCGGTGTTACAGGTGAGGAGTGTAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000668113.1
CDS-3UTR CAA 90 bp ATTACACTCCTCACCTGTAACACCGCTTCATGGCTGTATAGCTCCATTTCTGTGGGTTTGTGTTCTTCTTaGACCTTGAGCACGGACTGC +
Preference number: 5 (lower is better)
Translates to: ITLLTCNTASWLYSSISVGLCSS*TLSTDC
Trigger: GCAGTCCGTGCTCAAGGTCAAAGAAGAACACAAACC...CACAGAAATGGAGCTATACAGCCATGAAGCGGTGTTACAGGTGAGGAGTGTAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000668113.1
CDS-3UTR CAA 90 bp ATTACACTCCTCACCTGTAACACCGCTTCATGGCTGTATAGCTCCATTTCTGTGAGCATGGATCCGCATTaGTTCTTCATAGGGTTGTGG +
Preference number: 5 (lower is better)
Translates to: ITLLTCNTASWLYSSISVSMDPH*FFIGLW
Trigger: CCACAACCCTATGAAGAACAAATGCGGATCCATGCT...CACAGAAATGGAGCTATACAGCCATGAAGCGGTGTTACAGGTGAGGAGTGTAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CAA 90 bp CCTCTCACCCATTCATATCCACACGTAGAAGCTAGTCTCCGGACAGGTTGTTACCAACATCATCACAACTaGTATATTCAGGCGTGGAAG +
Preference number: 5 (lower is better)
Translates to: PLTHSYPHVEASLRTGCYQHHHN*YIQAWK
Trigger: CTTCCACGCCTGAATATACAAGTTGTGATGATGTTG...GTAACAACCTGTCCGGAGACTAGCTTCTACGTGTGGATATGAATGGGTGAGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507740.5
CDS-3UTR CAA 90 bp TTAAGACCTGTAGCTGCAGATTTTCTGAGCCATTCTTCCCACTGCACATGCTTTCTCTCGAACACGAGCTaGATCCCAAAGGGTAATCTC +
Preference number: 5 (lower is better)
Translates to: LRPVAADFLSHSSHCTCFLSNTS*IPKGNL
Trigger: GAGATTACCCTTTGGGATCAAGCTCGTGTTCGAGAG...AAAGCATGTGCAGTGGGAAGAATGGCTCAGAAAATCTGCAGCTACAGGTCTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507677.5
CDS-3UTR CAA 90 bp TGCTGGATGATTCCTTTCACTCTTCCTGCCCTTGGACATCCAACACTAGGTTCTCTGGCACTGATAATGTaGAGCTTTGAAGATCTCGAC +
Preference number: 5 (lower is better)
Translates to: CWMIPFTLPALGHPTLGSLALIM*SFEDLD
Trigger: GTCGAGATCTTCAAAGCTCAACATTATCAGTGCCAG...AGAACCTAGTGTTGGATGTCCAAGGGCAGGAAGAGTGAAAGGAATCATCCAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507677.5
CDS-3UTR CAA 90 bp TCCCAACTGGAATTCCCTTTACTTTTCAAACATACTATGTACAGGGCAACAACGTTCCACATTCCGACTTaGTGGAGGAGGGACACTGGG +
Preference number: 5 (lower is better)
Translates to: SQLEFPLLFKHTMYRATTFHIPT*WRRDTG
Trigger: CCCAGTGTCCCTCCTCCACAAAGTCGGAATGTGGAA...CGTTGTTGCCCTGTACATAGTATGTTTGAAAAGTAAAGGGAATTCCAGTTGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CAA 90 bp TCCCAACTGGAATTCCCTTTACTTTTCAAACATACTATGTACAGGGCAACAACGCTGCGACTGGAGTACTaGATGGGCTTGTCTGGACAG +
Preference number: 5 (lower is better)
Translates to: SQLEFPLLFKHTMYRATTLRLEY*MGLSGQ
Trigger: CTGTCCAGACAAGCCCATCAAGTACTCCAGTCGCAG...CGTTGTTGCCCTGTACATAGTATGTTTGAAAAGTAAAGGGAATTCCAGTTGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CAA 90 bp GTTCTTTTAACAACTTTACCTGGGTCCATCAGAATGTCAAGACACAGTCTTGGTCTGCGACTGGAGTACTaGATGGGCTTGTCTGGACAG +
Preference number: 5 (lower is better)
Translates to: VLLTTLPGSIRMSRHSLGLRLEY*MGLSGQ
Trigger: CTGTCCAGACAAGCCCATCAAGTACTCCAGTCGCAG...ACCAAGACTGTGTCTTGACATTCTGATGGACCCAGGTAAAGTTGTTAAAAGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CAA 90 bp CTTTTCAAACATACTATGTACAGGGCAACAACGGTCACTGGCATAGTGCTAGTTCCTGAATGTCACCCATaGCAGGTGTTGCCAGAGTCT +
Preference number: 5 (lower is better)
Translates to: LFKHTMYRATTVTGIVLVPECHP*QVLPES
Trigger: AGACTCTGGCAACACCTGCAATGGGTGACATTCAGG...AACTAGCACTATGCCAGTGACCGTTGTTGCCCTGTACATAGTATGTTTGAAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CAA 90 bp CCTCTCACCCATTCATATCCACACGTAGAAGCTAGTCTCCGGACAGGTTGTTACCATCCGATCACCATATaGGATAGCTCTAGTTCATCT +
Preference number: 5 (lower is better)
Translates to: PLTHSYPHVEASLRTGCYHPITI*DSSSSS
Trigger: AGATGAACTAGAGCTATCCAATATGGTGATCGGATG...GTAACAACCTGTCCGGAGACTAGCTTCTACGTGTGGATATGAATGGGTGAGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507740.5
CDS-3UTR CAA 90 bp GTTCTTTTAACAACTTTACCTGGGTCCATCAGAATGTCAAGACACAGTCTTGGTGGGACCTCCAATTTATaGGAGAGGGGTCCAGAGGAG +
Preference number: 5 (lower is better)
Translates to: VLLTTLPGSIRMSRHSLGGTSNL*ERGPEE
Trigger: CTCCTCTGGACCCCTCTCCAATAAATTGGAGGTCCC...ACCAAGACTGTGTCTTGACATTCTGATGGACCCAGGTAAAGTTGTTAAAAGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339750.3
CDS-3UTR CAA 90 bp CTGAAGCAGACTCCCATGAGAACTCTGCAGGGTTTCCTTCTCCCAGTTGAGGAAAAACATGGTGTATCTTaGTATCACCCTGTTGCATTC +
Preference number: 5 (lower is better)
Translates to: LKQTPMRTLQGFLLPVEEKHGVS*YHPVAF
Trigger: GAATGCAACAGGGTGATACAAAGATACACCATGTTT...TTCCTCAACTGGGAGAAGGAAACCCTGCAGAGTTCTCATGGGAGTCTGCTTCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000507740.5
CDS-3UTR CAA 90 bp ATTACACTCCTCACCTGTAACACCGCTTCATGGCTGTATAGCTCCATTTCTGTGGAACTTAGGAGAAATTaGACCTTGCAGCTCCACCCA +
Preference number: 5 (lower is better)
Translates to: ITLLTCNTASWLYSSISVELRRN*TLQLHP
Trigger: TGGGTGGAGCTGCAAGGTCAAATTTCTCCTAAGTTC...CACAGAAATGGAGCTATACAGCCATGAAGCGGTGTTACAGGTGAGGAGTGTAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CAA 90 bp CTAAGACCAGCAGTCCACTTATGTTATCGAGAAGTAGGAGACGGTGATTTCATTCAGGGTGCAAAGACATaGGGGATGCCTCACTGCTAT +
Preference number: 5 (lower is better)
Translates to: LRPAVHLCYREVGDGDFIQGAKT*GMPHCY
Trigger: ATAGCAGTGAGGCATCCCCAATGTCTTTGCACCCTG...AATGAAATCACCGTCTCCTACTTCTCGATAACATAAGTGGACTGCTGGTCTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507740.5
CDS-3UTR CAA 90 bp GTTCTTTTAACAACTTTACCTGGGTCCATCAGAATGTCAAGACACAGTCTTGGTGTTTCCTTCTCCCAGTaGAGGAATCGCCCCAGAAGG +
Preference number: 5 (lower is better)
Translates to: VLLTTLPGSIRMSRHSLGVSFSQ*RNRPRR
Trigger: CCTTCTGGGGCGATTCCTCAACTGGGAGAAGGAAAC...ACCAAGACTGTGTCTTGACATTCTGATGGACCCAGGTAAAGTTGTTAAAAGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507740.5
CDS-3UTR CAA 90 bp CTAAGACCAGCAGTCCACTTATGTTATCGAGAAGTAGGAGACGGTGATTTCATTGGGAAAGTGAAGGTGTaGGCATCAATGGCAGCCATG +
Preference number: 5 (lower is better)
Translates to: LRPAVHLCYREVGDGDFIGKVKV*ASMAAM
Trigger: CATGGCTGCCATTGATGCCAACACCTTCACTTTCCC...AATGAAATCACCGTCTCCTACTTCTCGATAACATAAGTGGACTGCTGGTCTTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507740.5
CDS-3UTR CAA 90 bp GTTCTTTTAACAACTTTACCTGGGTCCATCAGAATGTCAAGACACAGTCTTGGTGGCAGATACCACAGGTaGGCGCATCACCCTTCTGTT +
Preference number: 5 (lower is better)
Translates to: VLLTTLPGSIRMSRHSLGGRYHR*AHHPSV
Trigger: AACAGAAGGGTGATGCGCCAACCTGTGGTATCTGCC...ACCAAGACTGTGTCTTGACATTCTGATGGACCCAGGTAAAGTTGTTAAAAGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CAA 90 bp TCCCAACTGGAATTCCCTTTACTTTTCAAACATACTATGTACAGGGCAACAACGGGCAGATACCACAGGTaGGCGCATCACCCTTCTGTT +
Preference number: 5 (lower is better)
Translates to: SQLEFPLLFKHTMYRATTGRYHR*AHHPSV
Trigger: AACAGAAGGGTGATGCGCCAACCTGTGGTATCTGCC...CGTTGTTGCCCTGTACATAGTATGTTTGAAAAGTAAAGGGAATTCCAGTTGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CAA 90 bp ATTACACTCCTCACCTGTAACACCGCTTCATGGCTGTATAGCTCCATTTCTGTGACTGCTGATGCAGTTTaGTCTGGGGCTCCTTTTCAT +
Preference number: 5 (lower is better)
Translates to: ITLLTCNTASWLYSSISVTADAV*SGAPFH
Trigger: ATGAAAAGGAGCCCCAGACAAAACTGCATCAGCAGT...CACAGAAATGGAGCTATACAGCCATGAAGCGGTGTTACAGGTGAGGAGTGTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000668113.1
CDS TCA 90 bp TTCACGCCTGACCCATTTTTAATAGAATGCTGTCTTGTGAGCCCATaGGATCGACTTTTCTCCACTGCAGGTACAGATAAGTCACCTGAG +
Preference number: 5 (lower is better)
Translates to: FTPDPFLIECCLVSP*DRLFSTAGTDKSPE
Trigger: CTCAGGTGACTTATCTGTACCTGCAGTGGAGAAAAGTCGATCTCATGGGCTCACAAGACAGCATTCTATTAAAAATGGGTCAGGCGTGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000395361.3
ENST00000504942.6
ENST00000632716.1
ENST00000666250.1
ENST00000668113.1
CDS TCA 90 bp CTTGAAGCAGGTGAATGCCTGTCTGAAGCTATGTCACTGGCAATGTaGTGCTTCACGCCTGACCCATTTTTAATAGAATGCTGTCTTGTG +
Preference number: 5 (lower is better)
Translates to: LEAGECLSEAMSLAM*CFTPDPFLIECCLV
Trigger: CACAAGACAGCATTCTATTAAAAATGGGTCAGGCGTGAAGCATCACATTGCCAGTGACATAGCTTCAGACAGGCATTCACCTGCTTCAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395361.3
CDS-3UTR CAA 90 bp CTTTTCAAACATACTATGTACAGGGCAACAACGGTCACTGGCATAGTGCTAGTTTTTGTGCATAAGAACTaGGTCCCTGAGCCTCTCGAG +
Preference number: 5 (lower is better)
Translates to: LFKHTMYRATTVTGIVLVFVHKN*VPEPLE
Trigger: CTCGAGAGGCTCAGGGACCAAGTTCTTATGCACAAA...AACTAGCACTATGCCAGTGACCGTTGTTGCCCTGTACATAGTATGTTTGAAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CAA 90 bp GGTTTAGTCAGGAGTTGCCGAAAGAGCTCATTCGTGAGCTGGGAGTTGCAAGAAAACTACAAGTTCTACTaGTGGTTCAGGTTTGGATTC +
Preference number: 5 (lower is better)
Translates to: GLVRSCRKSSFVSWELQENYKFY*WFRFGF
Trigger: GAATCCAAACCTGAACCACAAGTAGAACTTGTAGTT...TTCTTGCAACTCCCAGCTCACGAATGAGCTCTTTCGGCAACTCCTGACTAAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507740.5
CDS-3UTR CAA 90 bp CTAAGACCAGCAGTCCACTTATGTTATCGAGAAGTAGGAGACGGTGATTTCATTCTCTCGAACACGAGCTaGATCCCAAAGGGTAATCTC +
Preference number: 5 (lower is better)
Translates to: LRPAVHLCYREVGDGDFILSNTS*IPKGNL
Trigger: GAGATTACCCTTTGGGATCAAGCTCGTGTTCGAGAG...AATGAAATCACCGTCTCCTACTTCTCGATAACATAAGTGGACTGCTGGTCTTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507740.5
CDS-3UTR CAA 90 bp CTTTTCAAACATACTATGTACAGGGCAACAACGGTCACTGGCATAGTGCTAGTTCTCTCGAACACGAGCTaGATCCCAAAGGGTAATCTC +
Preference number: 5 (lower is better)
Translates to: LFKHTMYRATTVTGIVLVLSNTS*IPKGNL
Trigger: GAGATTACCCTTTGGGATCAAGCTCGTGTTCGAGAG...AACTAGCACTATGCCAGTGACCGTTGTTGCCCTGTACATAGTATGTTTGAAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CAA 90 bp AGCCACAGAATTTTGTTTTTCAGAGTCCAACACATCTTAGCATTAGTAATTGACCACCCATTGCAGGTGTaGCCAGAGTCTGGCGTCCCA +
Preference number: 5 (lower is better)
Translates to: SHRILFFRVQHILALVIDHPLQV*PESGVP
Trigger: TGGGACGCCAGACTCTGGCAACACCTGCAATGGGTG...GTCAATTACTAATGCTAAGATGTGTTGGACTCTGAAAAACAAAATTCTGTGGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CAA 90 bp GTTCTTTTAACAACTTTACCTGGGTCCATCAGAATGTCAAGACACAGTCTTGGTCCTGAATGTCACCCATaGCAGGTGTTGCCAGAGTCT +
Preference number: 5 (lower is better)
Translates to: VLLTTLPGSIRMSRHSLGPECHP*QVLPES
Trigger: AGACTCTGGCAACACCTGCAATGGGTGACATTCAGG...ACCAAGACTGTGTCTTGACATTCTGATGGACCCAGGTAAAGTTGTTAAAAGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CAA 90 bp GTTCTTTTAACAACTTTACCTGGGTCCATCAGAATGTCAAGACACAGTCTTGGTATTGGGAAGCTCTTCTaGTCAGAGGGGCCAAGGTTG +
Preference number: 5 (lower is better)
Translates to: VLLTTLPGSIRMSRHSLGIGKLF*SEGPRL
Trigger: CAACCTTGGCCCCTCTGACAAGAAGAGCTTCCCAAT...ACCAAGACTGTGTCTTGACATTCTGATGGACCCAGGTAAAGTTGTTAAAAGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CAA 90 bp GGTTTAGTCAGGAGTTGCCGAAAGAGCTCATTCGTGAGCTGGGAGTTGCAAGAATGTAGCCACAGAATTTaGTTTTTCAGAGTCCAACAC +
Preference number: 5 (lower is better)
Translates to: GLVRSCRKSSFVSWELQECSHRI*FFRVQH
Trigger: GTGTTGGACTCTGAAAAACAAAATTCTGTGGCTACA...TTCTTGCAACTCCCAGCTCACGAATGAGCTCTTTCGGCAACTCCTGACTAAACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000507740.5
CDS-3UTR CAA 90 bp GGTTTAGTCAGGAGTTGCCGAAAGAGCTCATTCGTGAGCTGGGAGTTGCAAGAAGGTCTATTAAATCAATaGTTGCTGGTACACAGGTGT +
Preference number: 5 (lower is better)
Translates to: GLVRSCRKSSFVSWELQEGLLNQ*LLVHRC
Trigger: ACACCTGTGTACCAGCAACAATTGATTTAATAGACC...TTCTTGCAACTCCCAGCTCACGAATGAGCTCTTTCGGCAACTCCTGACTAAACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507740.5
CDS-3UTR CAA 90 bp GTTCTTTTAACAACTTTACCTGGGTCCATCAGAATGTCAAGACACAGTCTTGGTCAGGGTGCAAAGACATaGGGGATGCCTCACTGCTAT +
Preference number: 5 (lower is better)
Translates to: VLLTTLPGSIRMSRHSLGQGAKT*GMPHCY
Trigger: ATAGCAGTGAGGCATCCCCAATGTCTTTGCACCCTG...ACCAAGACTGTGTCTTGACATTCTGATGGACCCAGGTAAAGTTGTTAAAAGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000507740.5
ENST00000666250.1
CDS-3UTR CAA 90 bp ATTACACTCCTCACCTGTAACACCGCTTCATGGCTGTATAGCTCCATTTCTGTGAGTAGGCAGACAGCTTaGGTGATCTCTTGCCTAATT +
Preference number: 5 (lower is better)
Translates to: ITLLTCNTASWLYSSISVSRQTA*VISCLI
Trigger: AATTAGGCAAGAGATCACCAAAGCTGTCTGCCTACT...CACAGAAATGGAGCTATACAGCCATGAAGCGGTGTTACAGGTGAGGAGTGTAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507740.5
CDS TCA 90 bp ACACTGGGTGACCATGATCTAGTCCTTCCTATAACATCTACTCGATaGGGAGACCCTGATGGTGAACAGTGGTTTGATGACATTACTTGT +
Preference number: 5 (lower is better)
Translates to: TLGDHDLVLPITSTR*GDPDGEQWFDDITC
Trigger: ACAAGTAATGTCATCAAACCACTGTTCACCATCAGGGTCTCCTCATCGAGTAGATGTTATAGGAAGGACTAGATCATGGTCACCCAGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000262231.14
ENST00000408894.6
ENST00000436393.6
ENST00000504942.6
ENST00000507677.5
ENST00000507740.5
ENST00000632716.1
ENST00000666250.1
ENST00000668113.1
CDS TCA 90 bp ACAGATGGGCTTCTTTTCCTGTCTGAAGCTATGTCACTGGCAATGTaGTGCTTCACGCCTGACCCATTTTTAATAGAATGCTGTCTTGTG +
Preference number: 5 (lower is better)
Translates to: TDGLLFLSEAMSLAM*CFTPDPFLIECCLV
Trigger: CACAAGACAGCATTCTATTAAAAATGGGTCAGGCGTGAAGCATCACATTGCCAGTGACATAGCTTCAGACAGGAAAAGAAGCCCATCTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000504942.6
ENST00000632716.1
ENST00000666250.1
CDS CCA 90 bp TCTCACTTTCAATCTCAACATCATCACAACTTGTATATTCAGGCGTaGAAGCCAATTCCTCCTCTGAACTGCTCAACGAAATCTGGCGCA +
Preference number: 5 (lower is better)
Translates to: SHFQSQHHHNLYIQA*KPIPPLNCSTKSGA
Trigger: TGCGCCAGATTTCGTTGAGCAGTTCAGAGGAGGAATTGGCTTCCACGCCTGAATATACAAGTTGTGATGATGTTGAGATTGAAAGTGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000262231.14
ENST00000408894.6
ENST00000436393.6
ENST00000504942.6
ENST00000507740.5
ENST00000515551.5
ENST00000632716.1
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CAA 90 bp CCTCTCACCCATTCATATCCACACGTAGAAGCTAGTCTCCGGACAGGTTGTTACTGCATTGTTCAGTGTTaGTCCAAAAAGCTCATTTTG +
Preference number: 5 (lower is better)
Translates to: PLTHSYPHVEASLRTGCYCIVQC*SKKLIL
Trigger: CAAAATGAGCTTTTTGGACAAACACTGAACAATGCA...GTAACAACCTGTCCGGAGACTAGCTTCTACGTGTGGATATGAATGGGTGAGAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000507740.5
CDS-3UTR CAA 90 bp GGTTTAGTCAGGAGTTGCCGAAAGAGCTCATTCGTGAGCTGGGAGTTGCAAGAACTTCTTTTCCTTGCATaGTTCAGTGTTTGTCCAAAA +
Preference number: 5 (lower is better)
Translates to: GLVRSCRKSSFVSWELQELLFLA*FSVCPK
Trigger: TTTTGGACAAACACTGAACAATGCAAGGAAAAGAAG...TTCTTGCAACTCCCAGCTCACGAATGAGCTCTTTCGGCAACTCCTGACTAAACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507740.5
CDS-3UTR CAA 90 bp ATTACACTCCTCACCTGTAACACCGCTTCATGGCTGTATAGCTCCATTTCTGTGATGGGCTTCTTTTCCTaGCATTGTTCAGTGTTTGTC +
Preference number: 5 (lower is better)
Translates to: ITLLTCNTASWLYSSISVMGFFS*HCSVFV
Trigger: GACAAACACTGAACAATGCAAGGAAAAGAAGCCCAT...CACAGAAATGGAGCTATACAGCCATGAAGCGGTGTTACAGGTGAGGAGTGTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507740.5
CDS-3UTR CAA 90 bp ATTACACTCCTCACCTGTAACACCGCTTCATGGCTGTATAGCTCCATTTCTGTGTTGTTCTTCATAGGGTaGTGGCTTTACTGGATAACG +
Preference number: 5 (lower is better)
Translates to: ITLLTCNTASWLYSSISVLFFIG*WLYWIT
Trigger: CGTTATCCAGTAAAGCCACAACCCTATGAAGAACAA...CACAGAAATGGAGCTATACAGCCATGAAGCGGTGTTACAGGTGAGGAGTGTAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CAA 90 bp TCCCAACTGGAATTCCCTTTACTTTTCAAACATACTATGTACAGGGCAACAACGTTTGTGCATAAGAACTaGGTCCCTGAGCCTCTCGAG +
Preference number: 5 (lower is better)
Translates to: SQLEFPLLFKHTMYRATTFVHKN*VPEPLE
Trigger: CTCGAGAGGCTCAGGGACCAAGTTCTTATGCACAAA...CGTTGTTGCCCTGTACATAGTATGTTTGAAAAGTAAAGGGAATTCCAGTTGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CAA 90 bp ACTGGAATTCCCTTTACTTTTCAAACATACTATGTACAGGGCAACAACGGTCACTTTGTGCATAAGAACTaGGTCCCTGAGCCTCTCGAG +
Preference number: 5 (lower is better)
Translates to: TGIPFTFQTYYVQGNNGHFVHKN*VPEPLE
Trigger: CTCGAGAGGCTCAGGGACCAAGTTCTTATGCACAAA...GTGACCGTTGTTGCCCTGTACATAGTATGTTTGAAAAGTAAAGGGAATTCCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CAA 90 bp AAGTTTTCTGGCTTCTTTCTTTTTCCTGTGCTGGATGATTCCTTTCACTCTTCCCCTTCAAGCCAAGCATaGCTCCTGAATCTCGAGGTA +
Preference number: 5 (lower is better)
Translates to: KFSGFFLFPVLDDSFHSSPSSQA*LLNLEV
Trigger: TACCTCGAGATTCAGGAGCAATGCTTGGCTTGAAGG...GGAAGAGTGAAAGGAATCATCCAGCACAGGAAAAAGAAAGAAGCCAGAAAACTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000507677.5
CDS-3UTR CAA 90 bp GTTCTTTTAACAACTTTACCTGGGTCCATCAGAATGTCAAGACACAGTCTTGGTCCTTCAAGCCAAGCATaGCTCCTGAATCTCGAGGTA +
Preference number: 5 (lower is better)
Translates to: VLLTTLPGSIRMSRHSLGPSSQA*LLNLEV
Trigger: TACCTCGAGATTCAGGAGCAATGCTTGGCTTGAAGG...ACCAAGACTGTGTCTTGACATTCTGATGGACCCAGGTAAAGTTGTTAAAAGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CAA 90 bp TCCCAACTGGAATTCCCTTTACTTTTCAAACATACTATGTACAGGGCAACAACGCCTTCAAGCCAAGCATaGCTCCTGAATCTCGAGGTA +
Preference number: 5 (lower is better)
Translates to: SQLEFPLLFKHTMYRATTPSSQA*LLNLEV
Trigger: TACCTCGAGATTCAGGAGCAATGCTTGGCTTGAAGG...CGTTGTTGCCCTGTACATAGTATGTTTGAAAAGTAAAGGGAATTCCAGTTGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CAA 90 bp CCTCTCACCCATTCATATCCACACGTAGAAGCTAGTCTCCGGACAGGTTGTTACGATTCTAGAATGATGTaGTACACTTCCTCAAATGTG +
Preference number: 5 (lower is better)
Translates to: PLTHSYPHVEASLRTGCYDSRMM*YTSSNV
Trigger: CACATTTGAGGAAGTGTACAACATCATTCTAGAATC...GTAACAACCTGTCCGGAGACTAGCTTCTACGTGTGGATATGAATGGGTGAGAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507740.5
CDS-3UTR CAA 90 bp GTTCTTTTAACAACTTTACCTGGGTCCATCAGAATGTCAAGACACAGTCTTGGTAGAACTGGACTCCAGTaGTGCATGTGTGCTATCAGG +
Preference number: 5 (lower is better)
Translates to: VLLTTLPGSIRMSRHSLGRTGLQ*CMCAIR
Trigger: CCTGATAGCACACATGCACAACTGGAGTCCAGTTCT...ACCAAGACTGTGTCTTGACATTCTGATGGACCCAGGTAAAGTTGTTAAAAGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CAA 90 bp TCCCAACTGGAATTCCCTTTACTTTTCAAACATACTATGTACAGGGCAACAACGAGAACTGGACTCCAGTaGTGCATGTGTGCTATCAGG +
Preference number: 5 (lower is better)
Translates to: SQLEFPLLFKHTMYRATTRTGLQ*CMCAIR
Trigger: CCTGATAGCACACATGCACAACTGGAGTCCAGTTCT...CGTTGTTGCCCTGTACATAGTATGTTTGAAAAGTAAAGGGAATTCCAGTTGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CAA 90 bp CCTGTCCTGTCAGCTTCCCTGGTTTTAAGCCTTTCAAAATGGACTCACACTTGGAGGACGATCCATTTTTaGAGATTCAAAGGAGCTAGA +
Preference number: 5 (lower is better)
Translates to: PVLSASLVLSLSKWTHTWRTIHF*RFKGAR
Trigger: TCTAGCTCCTTTGAATCTCAAAAAATGGATCGTCCT...CCAAGTGTGAGTCCATTTTGAAAGGCTTAAAACCAGGGAAGCTGACAGGACAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000507677.5
CDS-3UTR CAA 90 bp ACTGGAATTCCCTTTACTTTTCAAACATACTATGTACAGGGCAACAACGGTCACCTCTCGAACACGAGCTaGATCCCAAAGGGTAATCTC +
Preference number: 5 (lower is better)
Translates to: TGIPFTFQTYYVQGNNGHLSNTS*IPKGNL
Trigger: GAGATTACCCTTTGGGATCAAGCTCGTGTTCGAGAG...GTGACCGTTGTTGCCCTGTACATAGTATGTTTGAAAAGTAAAGGGAATTCCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CAA 90 bp TGGAACAAAGCGGGTGAAGAAGGTGGGATAACCTTGCTTGCTAAGTTTTCTGGCATGGTGAACAGTGGTTaGATGACATTACTTGTTCTG +
Preference number: 5 (lower is better)
Translates to: WNKAGEEGGITLLAKFSGMVNSG*MTLLVL
Trigger: CAGAACAAGTAATGTCATCAAACCACTGTTCACCAT...GCCAGAAAACTTAGCAAGCAAGGTTATCCCACCTTCTTCACCCGCTTTGTTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507677.5
CDS-3UTR CAA 90 bp CTTTTCAAACATACTATGTACAGGGCAACAACGGTCACTGGCATAGTGCTAGTTGAGGCCGTTGTTCTGTaGATCTGGATCTGTGATATG +
Preference number: 5 (lower is better)
Translates to: LFKHTMYRATTVTGIVLVEAVVL*IWICDM
Trigger: CATATCACAGATCCAGATCAACAGAACAACGGCCTC...AACTAGCACTATGCCAGTGACCGTTGTTGCCCTGTACATAGTATGTTTGAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CAA 90 bp TCCCAACTGGAATTCCCTTTACTTTTCAAACATACTATGTACAGGGCAACAACGTATCCAACGTTCCCTTaGGTGGAAGCTGTGGAAGCT +
Preference number: 5 (lower is better)
Translates to: SQLEFPLLFKHTMYRATTYPTFP*VEAVEA
Trigger: AGCTTCCACAGCTTCCACCAAAGGGAACGTTGGATA...CGTTGTTGCCCTGTACATAGTATGTTTGAAAAGTAAAGGGAATTCCAGTTGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CAA 90 bp ACTGGAATTCCCTTTACTTTTCAAACATACTATGTACAGGGCAACAACGGTCACGGTGCTGGCAGTGTCTaGGAACCTGGTTTTACAACA +
Preference number: 5 (lower is better)
Translates to: TGIPFTFQTYYVQGNNGHGAGSV*EPGFTT
Trigger: TGTTGTAAAACCAGGTTCCAAGACACTGCCAGCACC...GTGACCGTTGTTGCCCTGTACATAGTATGTTTGAAAAGTAAAGGGAATTCCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CAA 90 bp TCCCAACTGGAATTCCCTTTACTTTTCAAACATACTATGTACAGGGCAACAACGGGTGCTGGCAGTGTCTaGGAACCTGGTTTTACAACA +
Preference number: 5 (lower is better)
Translates to: SQLEFPLLFKHTMYRATTGAGSV*EPGFTT
Trigger: TGTTGTAAAACCAGGTTCCAAGACACTGCCAGCACC...CGTTGTTGCCCTGTACATAGTATGTTTGAAAAGTAAAGGGAATTCCAGTTGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CAA 90 bp ATTACACTCCTCACCTGTAACACCGCTTCATGGCTGTATAGCTCCATTTCTGTGTCTGAGAACACAGGATaGCTTTGTATCCCTAGAAAC +
Preference number: 5 (lower is better)
Translates to: ITLLTCNTASWLYSSISVSENTG*LCIPRN
Trigger: GTTTCTAGGGATACAAAGCAATCCTGTGTTCTCAGA...CACAGAAATGGAGCTATACAGCCATGAAGCGGTGTTACAGGTGAGGAGTGTAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CAA 90 bp AGAAACAGGCTCAGAAGACACAACATTAAGCATGCAGTGTTACCAGGGTTTGCACCAAAGGCAGGGGTTTaGACTTTAGGAGATTTTCAC +
Preference number: 5 (lower is better)
Translates to: RNRLRRHNIKHAVLPGFAPKAGV*TLGDFH
Trigger: GTGAAAATCTCCTAAAGTCAAAACCCCTGCCTTTGG...TGCAAACCCTGGTAACACTGCATGCTTAATGTTGTGTCTTCTGAGCCTGTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CAA 90 bp CTTTTCAAACATACTATGTACAGGGCAACAACGGTCACTGGCATAGTGCTAGTTGAACTTAGGAGAAATTaGACCTTGCAGCTCCACCCA +
Preference number: 5 (lower is better)
Translates to: LFKHTMYRATTVTGIVLVELRRN*TLQLHP
Trigger: TGGGTGGAGCTGCAAGGTCAAATTTCTCCTAAGTTC...AACTAGCACTATGCCAGTGACCGTTGTTGCCCTGTACATAGTATGTTTGAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CAA 90 bp CTAAGACCAGCAGTCCACTTATGTTATCGAGAAGTAGGAGACGGTGATTTCATTGAACTTAGGAGAAATTaGACCTTGCAGCTCCACCCA +
Preference number: 5 (lower is better)
Translates to: LRPAVHLCYREVGDGDFIELRRN*TLQLHP
Trigger: TGGGTGGAGCTGCAAGGTCAAATTTCTCCTAAGTTC...AATGAAATCACCGTCTCCTACTTCTCGATAACATAAGTGGACTGCTGGTCTTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507740.5
CDS-3UTR CAA 90 bp GTTCTTTTAACAACTTTACCTGGGTCCATCAGAATGTCAAGACACAGTCTTGGTCCCTCGAAGAACCTTTaGATCAGGTTGCTGTGGTGT +
Preference number: 5 (lower is better)
Translates to: VLLTTLPGSIRMSRHSLGPSKNL*IRLLWC
Trigger: ACACCACAGCAACCTGATCAAAAGGTTCTTCGAGGG...ACCAAGACTGTGTCTTGACATTCTGATGGACCCAGGTAAAGTTGTTAAAAGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CAA 90 bp ACTGGAATTCCCTTTACTTTTCAAACATACTATGTACAGGGCAACAACGGTCACCCCTCGAAGAACCTTTaGATCAGGTTGCTGTGGTGT +
Preference number: 5 (lower is better)
Translates to: TGIPFTFQTYYVQGNNGHPSKNL*IRLLWC
Trigger: ACACCACAGCAACCTGATCAAAAGGTTCTTCGAGGG...GTGACCGTTGTTGCCCTGTACATAGTATGTTTGAAAAGTAAAGGGAATTCCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CAA 90 bp GGTGGGACTTTGTCTTATAATCATATGAGCCAATTCTCCCTAATAAACTCCCTTTTTGGACTCTGGAACTaGCACCAGTGGCTTGCTGGT +
Preference number: 5 (lower is better)
Translates to: GGTLSYNHMSQFSLINSLFGLWN*HQWLAG
Trigger: ACCAGCAAGCCACTGGTGCAAGTTCCAGAGTCCAAA...AAGGGAGTTTATTAGGGAGAATTGGCTCATATGATTATAAGACAAAGTCCCACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000507677.5
CDS-3UTR CAA 90 bp ATTACACTCCTCACCTGTAACACCGCTTCATGGCTGTATAGCTCCATTTCTGTGACTCGAGTTGAGTCTTaGGAAATGGAGGAAATGGTT +
Preference number: 5 (lower is better)
Translates to: ITLLTCNTASWLYSSISVTRVES*EMEEMV
Trigger: AACCATTTCCTCCATTTCCAAAGACTCAACTCGAGT...CACAGAAATGGAGCTATACAGCCATGAAGCGGTGTTACAGGTGAGGAGTGTAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507740.5
CDS-3UTR CAA 90 bp TCCCAACTGGAATTCCCTTTACTTTTCAAACATACTATGTACAGGGCAACAACGGGGTTTAGTCAGGAGTaGCCGAAAGAGCTCATTCGT +
Preference number: 5 (lower is better)
Translates to: SQLEFPLLFKHTMYRATTGFSQE*PKELIR
Trigger: ACGAATGAGCTCTTTCGGCAACTCCTGACTAAACCC...CGTTGTTGCCCTGTACATAGTATGTTTGAAAAGTAAAGGGAATTCCAGTTGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507740.5
CDS-3UTR CAA 90 bp ATTACACTCCTCACCTGTAACACCGCTTCATGGCTGTATAGCTCCATTTCTGTGCATACCCACATAACCTaGTTTGAGCGTAATGACACT +
Preference number: 5 (lower is better)
Translates to: ITLLTCNTASWLYSSISVHTHIT*FERNDT
Trigger: AGTGTCATTACGCTCAAACAAGGTTATGTGGGTATG...CACAGAAATGGAGCTATACAGCCATGAAGCGGTGTTACAGGTGAGGAGTGTAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000666250.1
ENST00000668113.1
CDS TCA 90 bp ATGGGCTTCTTTTCCTTTGTTCAACCAATGCACATCTGTCGAGCATaGAGCATCATGTTGACAAAAATACATCAACAGTGTGCCAGGCAG +
Preference number: 5 (lower is better)
Translates to: MGFFSFVQPMHICRA*SIMLTKIHQQCARQ
Trigger: CTGCCTGGCACACTGTTGATGTATTTTTGTCAACATGATGCTTCATGCTCGACAGATGTGCATTGGTTGAACAAAGGAAAAGAAGCCCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000436393.6
CDS TCA 90 bp AGTTCAGAGGAAGTTTTCCTGTCTGAAGCTATGTCACTGGCAATGTaGTGCTTCACGCCTGACCCATTTTTAATAGAATGCTGTCTTGTG +
Preference number: 5 (lower is better)
Translates to: SSEEVFLSEAMSLAM*CFTPDPFLIECCLV
Trigger: CACAAGACAGCATTCTATTAAAAATGGGTCAGGCGTGAAGCATCACATTGCCAGTGACATAGCTTCAGACAGGAAAACTTCCTCTGAACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000668113.1
CDS GCA 90 bp CTGTCGAGCATGAAGCATCATGTTGACAAAAATACATCAACAGTGTaGCAGGCAGTGCTTTCATTTAATCCTTCTAGCCCTGGCAAAATC +
Preference number: 5 (lower is better)
Translates to: LSSMKHHVDKNTSTV*QAVLSFNPSSPGKI
Trigger: GATTTTGCCAGGGCTAGAAGGATTAAATGAAAGCACTGCCTGGCACACTGTTGATGTATTTTTGTCAACATGATGCTTCATGCTCGACAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000436393.6
CDS-3UTR CAA 90 bp ACTGGAATTCCCTTTACTTTTCAAACATACTATGTACAGGGCAACAACGGTCACAGCATGGATCCGCATTaGTTCTTCATAGGGTTGTGG +
Preference number: 5 (lower is better)
Translates to: TGIPFTFQTYYVQGNNGHSMDPH*FFIGLW
Trigger: CCACAACCCTATGAAGAACAAATGCGGATCCATGCT...GTGACCGTTGTTGCCCTGTACATAGTATGTTTGAAAAGTAAAGGGAATTCCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CAA 90 bp ATTACACTCCTCACCTGTAACACCGCTTCATGGCTGTATAGCTCCATTTCTGTGCTTCCAGATCAGCATTaGCCAAAGAAACATCACTAT +
Preference number: 5 (lower is better)
Translates to: ITLLTCNTASWLYSSISVLPDQH*PKKHHY
Trigger: ATAGTGATGTTTCTTTGGCAAATGCTGATCTGGAAG...CACAGAAATGGAGCTATACAGCCATGAAGCGGTGTTACAGGTGAGGAGTGTAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CAA 90 bp ATATGGAGAAATCCTCTCACCCATTCATATCCACACGTAGAAGCTAGTCTCCGGTTTTACCGCCTTTCTTaGATTTATGAGGCTTTGGTG +
Preference number: 5 (lower is better)
Translates to: IWRNPLTHSYPHVEASLRFYRLS*IYEALV
Trigger: CACCAAAGCCTCATAAATCAAAGAAAGGCGGTAAAA...CCGGAGACTAGCTTCTACGTGTGGATATGAATGGGTGAGAGGATTTCTCCATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507740.5
CDS-3UTR CAA 90 bp ATTACACTCCTCACCTGTAACACCGCTTCATGGCTGTATAGCTCCATTTCTGTGTTTTACCGCCTTTCTTaGATTTATGAGGCTTTGGTG +
Preference number: 5 (lower is better)
Translates to: ITLLTCNTASWLYSSISVFYRLS*IYEALV
Trigger: CACCAAAGCCTCATAAATCAAAGAAAGGCGGTAAAA...CACAGAAATGGAGCTATACAGCCATGAAGCGGTGTTACAGGTGAGGAGTGTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CAA 90 bp AGAAACAGGCTCAGAAGACACAACATTAAGCATGCAGTGTTACCAGGGTTTGCACAACATCATCACAACTaGTATATTCAGGCGTGGAAG +
Preference number: 5 (lower is better)
Translates to: RNRLRRHNIKHAVLPGFAQHHHN*YIQAWK
Trigger: CTTCCACGCCTGAATATACAAGTTGTGATGATGTTG...TGCAAACCCTGGTAACACTGCATGCTTAATGTTGTGTCTTCTGAGCCTGTTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CAA 90 bp ATTACACTCCTCACCTGTAACACCGCTTCATGGCTGTATAGCTCCATTTCTGTGAGGACGATCCATTTTTaGAGATTCAAAGGAGCTAGA +
Preference number: 5 (lower is better)
Translates to: ITLLTCNTASWLYSSISVRTIHF*RFKGAR
Trigger: TCTAGCTCCTTTGAATCTCAAAAAATGGATCGTCCT...CACAGAAATGGAGCTATACAGCCATGAAGCGGTGTTACAGGTGAGGAGTGTAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CAA 90 bp AGCCACAGAATTTTGTTTTTCAGAGTCCAACACATCTTAGCATTAGTAATTGACTTTGCAACCTCCGTGTaGGGCTCTCTCCATGGAGCT +
Preference number: 5 (lower is better)
Translates to: SHRILFFRVQHILALVIDFATSV*GSLHGA
Trigger: AGCTCCATGGAGAGAGCCCAACACGGAGGTTGCAAA...GTCAATTACTAATGCTAAGATGTGTTGGACTCTGAAAAACAAAATTCTGTGGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CAA 90 bp GTTCTTTTAACAACTTTACCTGGGTCCATCAGAATGTCAAGACACAGTCTTGGTGAGGCCGTTGTTCTGTaGATCTGGATCTGTGATATG +
Preference number: 5 (lower is better)
Translates to: VLLTTLPGSIRMSRHSLGEAVVL*IWICDM
Trigger: CATATCACAGATCCAGATCAACAGAACAACGGCCTC...ACCAAGACTGTGTCTTGACATTCTGATGGACCCAGGTAAAGTTGTTAAAAGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CAA 90 bp AGAAACAGGCTCAGAAGACACAACATTAAGCATGCAGTGTTACCAGGGTTTGCACATCCGATCACCATATaGGATAGCTCTAGTTCATCT +
Preference number: 5 (lower is better)
Translates to: RNRLRRHNIKHAVLPGFAHPITI*DSSSSS
Trigger: AGATGAACTAGAGCTATCCAATATGGTGATCGGATG...TGCAAACCCTGGTAACACTGCATGCTTAATGTTGTGTCTTCTGAGCCTGTTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CAA 90 bp AGCCACAGAATTTTGTTTTTCAGAGTCCAACACATCTTAGCATTAGTAATTGACTCAGAGGGGCCAAGGTaGGATCTACTAGGGAGGAAG +
Preference number: 5 (lower is better)
Translates to: SHRILFFRVQHILALVIDSEGPR*DLLGRK
Trigger: CTTCCTCCCTAGTAGATCCAACCTTGGCCCCTCTGA...GTCAATTACTAATGCTAAGATGTGTTGGACTCTGAAAAACAAAATTCTGTGGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CAA 90 bp AGAAACAGGCTCAGAAGACACAACATTAAGCATGCAGTGTTACCAGGGTTTGCATCTGAGAACACAGGATaGCTTTGTATCCCTAGAAAC +
Preference number: 5 (lower is better)
Translates to: RNRLRRHNIKHAVLPGFASENTG*LCIPRN
Trigger: GTTTCTAGGGATACAAAGCAATCCTGTGTTCTCAGA...TGCAAACCCTGGTAACACTGCATGCTTAATGTTGTGTCTTCTGAGCCTGTTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CAA 90 bp ATTACACTCCTCACCTGTAACACCGCTTCATGGCTGTATAGCTCCATTTCTGTGAATATAAAGGTGCCATaGAAAAGGGCTTCTGTTGCA +
Preference number: 5 (lower is better)
Translates to: ITLLTCNTASWLYSSISVNIKVP*KRASVA
Trigger: TGCAACAGAAGCCCTTTTCAATGGCACCTTTATATT...CACAGAAATGGAGCTATACAGCCATGAAGCGGTGTTACAGGTGAGGAGTGTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CAA 90 bp GTTCTTTTAACAACTTTACCTGGGTCCATCAGAATGTCAAGACACAGTCTTGGTTTCCTGACCACTTCTTaGGTCTCCTGCTTTTCACCT +
Preference number: 5 (lower is better)
Translates to: VLLTTLPGSIRMSRHSLGFLTTS*VSCFSP
Trigger: AGGTGAAAAGCAGGAGACCAAAGAAGTGGTCAGGAA...ACCAAGACTGTGTCTTGACATTCTGATGGACCCAGGTAAAGTTGTTAAAAGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CAA 90 bp ATTACACTCCTCACCTGTAACACCGCTTCATGGCTGTATAGCTCCATTTCTGTGAAACATGGTGTATCTTaGTATCACCCTGTTGCATTC +
Preference number: 5 (lower is better)
Translates to: ITLLTCNTASWLYSSISVKHGVS*YHPVAF
Trigger: GAATGCAACAGGGTGATACAAAGATACACCATGTTT...CACAGAAATGGAGCTATACAGCCATGAAGCGGTGTTACAGGTGAGGAGTGTAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CAA 90 bp AGAAACAGGCTCAGAAGACACAACATTAAGCATGCAGTGTTACCAGGGTTTGCAAACCTTTTGATCAGGTaGCTGTGGTGTATTAGATCC +
Preference number: 5 (lower is better)
Translates to: RNRLRRHNIKHAVLPGFANLLIR*LWCIRS
Trigger: GGATCTAATACACCACAGCAACCTGATCAAAAGGTT...TGCAAACCCTGGTAACACTGCATGCTTAATGTTGTGTCTTCTGAGCCTGTTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CAA 90 bp GGTGGGACTTTGTCTTATAATCATATGAGCCAATTCTCCCTAATAAACTCCCTTCCAACACTAGGTTCTTaGGCCTTTGGACTCTGGAAC +
Preference number: 5 (lower is better)
Translates to: GGTLSYNHMSQFSLINSLPTLGS*AFGLWN
Trigger: GTTCCAGAGTCCAAAGGCCAAAGAACCTAGTGTTGG...AAGGGAGTTTATTAGGGAGAATTGGCTCATATGATTATAAGACAAAGTCCCACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507677.5
CDS-3UTR CAA 90 bp TTAAGACCTGTAGCTGCAGATTTTCTGAGCCATTCTTCCCACTGCACATGCTTTACATTACGTGTCAACTaGAATGGAATGAAGGAAGCC +
Preference number: 5 (lower is better)
Translates to: LRPVAADFLSHSSHCTCFTLRVN*NGMKEA
Trigger: GGCTTCCTTCATTCCATTCAAGTTGACACGTAATGT...AAAGCATGTGCAGTGGGAAGAATGGCTCAGAAAATCTGCAGCTACAGGTCTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507677.5
CDS-3UTR CAA 90 bp CTTTTCAAACATACTATGTACAGGGCAACAACGGTCACTGGCATAGTGCTAGTTTTGTTCTTCATAGGGTaGTGGCTTTACTGGATAACG +
Preference number: 5 (lower is better)
Translates to: LFKHTMYRATTVTGIVLVLFFIG*WLYWIT
Trigger: CGTTATCCAGTAAAGCCACAACCCTATGAAGAACAA...AACTAGCACTATGCCAGTGACCGTTGTTGCCCTGTACATAGTATGTTTGAAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CAA 90 bp ACTGGAATTCCCTTTACTTTTCAAACATACTATGTACAGGGCAACAACGGTCACATGGTTTGTGGTCCTTaGTGCATAAGAACTTGGTCC +
Preference number: 5 (lower is better)
Translates to: TGIPFTFQTYYVQGNNGHMVCGP*CIRTWS
Trigger: GGACCAAGTTCTTATGCACAAAGGACCACAAACCAT...GTGACCGTTGTTGCCCTGTACATAGTATGTTTGAAAAGTAAAGGGAATTCCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CAA 90 bp ATTACACTCCTCACCTGTAACACCGCTTCATGGCTGTATAGCTCCATTTCTGTGGATTCTAGAATGATGTaGTACACTTCCTCAAATGTG +
Preference number: 5 (lower is better)
Translates to: ITLLTCNTASWLYSSISVDSRMM*YTSSNV
Trigger: CACATTTGAGGAAGTGTACAACATCATTCTAGAATC...CACAGAAATGGAGCTATACAGCCATGAAGCGGTGTTACAGGTGAGGAGTGTAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CAA 90 bp GCTGGTAAAGTATTGTTTCTAGATGTGTCTGTAAGGTGTTGCCAGAGGAGACTGAACTACAAGTTCTACTaGTGGTTCAGGTTTGGATTC +
Preference number: 5 (lower is better)
Translates to: AGKVLFLDVSVRCCQRRLNYKFY*WFRFGF
Trigger: GAATCCAAACCTGAACCACAAGTAGAACTTGTAGTT...CAGTCTCCTCTGGCAACACCTTACAGACACATCTAGAAACAATACTTTACCAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507677.5
CDS-3UTR CAA 90 bp AGAAACAGGCTCAGAAGACACAACATTAAGCATGCAGTGTTACCAGGGTTTGCAAGGACGATCCATTTTTaGAGATTCAAAGGAGCTAGA +
Preference number: 5 (lower is better)
Translates to: RNRLRRHNIKHAVLPGFARTIHF*RFKGAR
Trigger: TCTAGCTCCTTTGAATCTCAAAAAATGGATCGTCCT...TGCAAACCCTGGTAACACTGCATGCTTAATGTTGTGTCTTCTGAGCCTGTTTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CAA 90 bp ACTGGAATTCCCTTTACTTTTCAAACATACTATGTACAGGGCAACAACGGTCACCTGGCACTGATAATGTaGAGCTTTGAAGATCTCGAC +
Preference number: 5 (lower is better)
Translates to: TGIPFTFQTYYVQGNNGHLALIM*SFEDLD
Trigger: GTCGAGATCTTCAAAGCTCAACATTATCAGTGCCAG...GTGACCGTTGTTGCCCTGTACATAGTATGTTTGAAAAGTAAAGGGAATTCCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CAA 90 bp AGCCACAGAATTTTGTTTTTCAGAGTCCAACACATCTTAGCATTAGTAATTGACGAGTACTTGATGGGCTaGTCTGGACAGACCCAGTAC +
Preference number: 5 (lower is better)
Translates to: SHRILFFRVQHILALVIDEYLMG*SGQTQY
Trigger: GTACTGGGTCTGTCCAGACAAGCCCATCAAGTACTC...GTCAATTACTAATGCTAAGATGTGTTGGACTCTGAAAAACAAAATTCTGTGGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CAA 90 bp CTTTTCAAACATACTATGTACAGGGCAACAACGGTCACTGGCATAGTGCTAGTTCATCCGATCACCATATaGGATAGCTCTAGTTCATCT +
Preference number: 5 (lower is better)
Translates to: LFKHTMYRATTVTGIVLVHPITI*DSSSSS
Trigger: AGATGAACTAGAGCTATCCAATATGGTGATCGGATG...AACTAGCACTATGCCAGTGACCGTTGTTGCCCTGTACATAGTATGTTTGAAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CAA 90 bp CTTTTCAAACATACTATGTACAGGGCAACAACGGTCACTGGCATAGTGCTAGTTTCTGAGAACACAGGATaGCTTTGTATCCCTAGAAAC +
Preference number: 5 (lower is better)
Translates to: LFKHTMYRATTVTGIVLVSENTG*LCIPRN
Trigger: GTTTCTAGGGATACAAAGCAATCCTGTGTTCTCAGA...AACTAGCACTATGCCAGTGACCGTTGTTGCCCTGTACATAGTATGTTTGAAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CAA 90 bp AGAAACAGGCTCAGAAGACACAACATTAAGCATGCAGTGTTACCAGGGTTTGCATGTAGCCACAGAATTTaGTTTTTCAGAGTCCAACAC +
Preference number: 5 (lower is better)
Translates to: RNRLRRHNIKHAVLPGFACSHRI*FFRVQH
Trigger: GTGTTGGACTCTGAAAAACAAAATTCTGTGGCTACA...TGCAAACCCTGGTAACACTGCATGCTTAATGTTGTGTCTTCTGAGCCTGTTTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CAA 90 bp AGAAACAGGCTCAGAAGACACAACATTAAGCATGCAGTGTTACCAGGGTTTGCACTTTGTATCACCCTGTaGCATTCTCTCTCCTTTTTA +
Preference number: 5 (lower is better)
Translates to: RNRLRRHNIKHAVLPGFALCITL*HSLSFL
Trigger: TAAAAAGGAGAGAGAATGCAACAGGGTGATACAAAG...TGCAAACCCTGGTAACACTGCATGCTTAATGTTGTGTCTTCTGAGCCTGTTTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CAA 90 bp ATTACACTCCTCACCTGTAACACCGCTTCATGGCTGTATAGCTCCATTTCTGTGTACTCCCAAGTCATGTaGCAAAATCCTTTTCAACAT +
Preference number: 5 (lower is better)
Translates to: ITLLTCNTASWLYSSISVYSQVM*QNPFQH
Trigger: ATGTTGAAAAGGATTTTGCAACATGACTTGGGAGTA...CACAGAAATGGAGCTATACAGCCATGAAGCGGTGTTACAGGTGAGGAGTGTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CAA 90 bp TCCCAACTGGAATTCCCTTTACTTTTCAAACATACTATGTACAGGGCAACAACGCCAAAGGCAGGGGTTTaGACTTTAGGAGATTTTCAC +
Preference number: 5 (lower is better)
Translates to: SQLEFPLLFKHTMYRATTPKAGV*TLGDFH
Trigger: GTGAAAATCTCCTAAAGTCAAAACCCCTGCCTTTGG...CGTTGTTGCCCTGTACATAGTATGTTTGAAAAGTAAAGGGAATTCCAGTTGGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CAA 90 bp GTTCTTTTAACAACTTTACCTGGGTCCATCAGAATGTCAAGACACAGTCTTGGTCCAAAGGCAGGGGTTTaGACTTTAGGAGATTTTCAC +
Preference number: 5 (lower is better)
Translates to: VLLTTLPGSIRMSRHSLGPKAGV*TLGDFH
Trigger: GTGAAAATCTCCTAAAGTCAAAACCCCTGCCTTTGG...ACCAAGACTGTGTCTTGACATTCTGATGGACCCAGGTAAAGTTGTTAAAAGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CAA 90 bp AGAAACAGGCTCAGAAGACACAACATTAAGCATGCAGTGTTACCAGGGTTTGCATGTCAAGACACAGTCTaGGTGTATTTCATATTGCAC +
Preference number: 5 (lower is better)
Translates to: RNRLRRHNIKHAVLPGFACQDTV*VYFILH
Trigger: GTGCAATATGAAATACACCAAGACTGTGTCTTGACA...TGCAAACCCTGGTAACACTGCATGCTTAATGTTGTGTCTTCTGAGCCTGTTTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CAA 90 bp GCTGGTAAAGTATTGTTTCTAGATGTGTCTGTAAGGTGTTGCCAGAGGAGACTGTATATCCTATTAGTTTaGTCCCTCTGGAGAACACTG +
Preference number: 5 (lower is better)
Translates to: AGKVLFLDVSVRCCQRRLYILLV*SLWRTL
Trigger: CAGTGTTCTCCAGAGGGACAAAACTAATAGGATATA...CAGTCTCCTCTGGCAACACCTTACAGACACATCTAGAAACAATACTTTACCAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507677.5
CDS-3UTR CAA 90 bp ATTACACTCCTCACCTGTAACACCGCTTCATGGCTGTATAGCTCCATTTCTGTGAAATGGAGGAAATGGTaGTTTCCAAGAATAGAGAGA +
Preference number: 5 (lower is better)
Translates to: ITLLTCNTASWLYSSISVKWRKW*FPRIER
Trigger: TCTCTCTATTCTTGGAAACAACCATTTCCTCCATTT...CACAGAAATGGAGCTATACAGCCATGAAGCGGTGTTACAGGTGAGGAGTGTAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507740.5
CDS-3UTR CAA 90 bp GTTCTTTTAACAACTTTACCTGGGTCCATCAGAATGTCAAGACACAGTCTTGGTCCATCATATCCTTTATaGTTGCCTATGGAGCCTTGG +
Preference number: 5 (lower is better)
Translates to: VLLTTLPGSIRMSRHSLGPSYPL*LPMEPW
Trigger: CCAAGGCTCCATAGGCAACAATAAAGGATATGATGG...ACCAAGACTGTGTCTTGACATTCTGATGGACCCAGGTAAAGTTGTTAAAAGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507740.5
CDS-3UTR CAA 90 bp CTAAGACCAGCAGTCCACTTATGTTATCGAGAAGTAGGAGACGGTGATTTCATTAGCTTTGGTGATCTCTaGCCTAATTCTATCATACCC +
Preference number: 5 (lower is better)
Translates to: LRPAVHLCYREVGDGDFISFGDL*PNSIIP
Trigger: GGGTATGATAGAATTAGGCAAGAGATCACCAAAGCT...AATGAAATCACCGTCTCCTACTTCTCGATAACATAAGTGGACTGCTGGTCTTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507740.5
CDS-3UTR CAA 90 bp AGAAACAGGCTCAGAAGACACAACATTAAGCATGCAGTGTTACCAGGGTTTGCATTGGACAGATGTTTATaGAGCAGCTATGTGTCAAAC +
Preference number: 5 (lower is better)
Translates to: RNRLRRHNIKHAVLPGFALDRCL*SSYVSN
Trigger: GTTTGACACATAGCTGCTCAATAAACATCTGTCCAA...TGCAAACCCTGGTAACACTGCATGCTTAATGTTGTGTCTTCTGAGCCTGTTTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507740.5
CDS-3UTR CAA 90 bp ACTGGAATTCCCTTTACTTTTCAAACATACTATGTACAGGGCAACAACGGTCACAAACTGAGGTTCATGTaGAGATCGCCTATCAGCATA +
Preference number: 5 (lower is better)
Translates to: TGIPFTFQTYYVQGNNGHKLRFM*RSPISI
Trigger: TATGCTGATAGGCGATCTCAACATGAACCTCAGTTT...GTGACCGTTGTTGCCCTGTACATAGTATGTTTGAAAAGTAAAGGGAATTCCAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CAA 90 bp CTTTTCAAACATACTATGTACAGGGCAACAACGGTCACTGGCATAGTGCTAGTTCTTCCAGATCAGCATTaGCCAAAGAAACATCACTAT +
Preference number: 5 (lower is better)
Translates to: LFKHTMYRATTVTGIVLVLPDQH*PKKHHY
Trigger: ATAGTGATGTTTCTTTGGCAAATGCTGATCTGGAAG...AACTAGCACTATGCCAGTGACCGTTGTTGCCCTGTACATAGTATGTTTGAAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CAA 90 bp ACTGGAATTCCCTTTACTTTTCAAACATACTATGTACAGGGCAACAACGGTCACCAACATCATCACAACTaGTATATTCAGGCGTGGAAG +
Preference number: 5 (lower is better)
Translates to: TGIPFTFQTYYVQGNNGHQHHHN*YIQAWK
Trigger: CTTCCACGCCTGAATATACAAGTTGTGATGATGTTG...GTGACCGTTGTTGCCCTGTACATAGTATGTTTGAAAAGTAAAGGGAATTCCAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CAA 90 bp CTAAGACCAGCAGTCCACTTATGTTATCGAGAAGTAGGAGACGGTGATTTCATTACTTGTGGTTCAGGTTaGGATTCTAGAATGATGTTG +
Preference number: 5 (lower is better)
Translates to: LRPAVHLCYREVGDGDFITCGSG*DSRMML
Trigger: CAACATCATTCTAGAATCCAAACCTGAACCACAAGT...AATGAAATCACCGTCTCCTACTTCTCGATAACATAAGTGGACTGCTGGTCTTAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507740.5
CDS-3UTR CAA 90 bp TCCCAACTGGAATTCCCTTTACTTTTCAAACATACTATGTACAGGGCAACAACGTCTGAGAACACAGGATaGCTTTGTATCCCTAGAAAC +
Preference number: 5 (lower is better)
Translates to: SQLEFPLLFKHTMYRATTSENTG*LCIPRN
Trigger: GTTTCTAGGGATACAAAGCAATCCTGTGTTCTCAGA...CGTTGTTGCCCTGTACATAGTATGTTTGAAAAGTAAAGGGAATTCCAGTTGGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CAA 90 bp CTAAGACCAGCAGTCCACTTATGTTATCGAGAAGTAGGAGACGGTGATTTCATTCTTTGTATCACCCTGTaGCATTCTCTCTCCTTTTTA +
Preference number: 5 (lower is better)
Translates to: LRPAVHLCYREVGDGDFILCITL*HSLSFL
Trigger: TAAAAAGGAGAGAGAATGCAACAGGGTGATACAAAG...AATGAAATCACCGTCTCCTACTTCTCGATAACATAAGTGGACTGCTGGTCTTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000507740.5
CDS-3UTR CAA 90 bp CTTTTCAAACATACTATGTACAGGGCAACAACGGTCACTGGCATAGTGCTAGTTAAACATGGTGTATCTTaGTATCACCCTGTTGCATTC +
Preference number: 5 (lower is better)
Translates to: LFKHTMYRATTVTGIVLVKHGVS*YHPVAF
Trigger: GAATGCAACAGGGTGATACAAAGATACACCATGTTT...AACTAGCACTATGCCAGTGACCGTTGTTGCCCTGTACATAGTATGTTTGAAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CAA 90 bp CTTTTCAAACATACTATGTACAGGGCAACAACGGTCACTGGCATAGTGCTAGTTGGTCTATTAAATCAATaGTTGCTGGTACACAGGTGT +
Preference number: 5 (lower is better)
Translates to: LFKHTMYRATTVTGIVLVGLLNQ*LLVHRC
Trigger: ACACCTGTGTACCAGCAACAATTGATTTAATAGACC...AACTAGCACTATGCCAGTGACCGTTGTTGCCCTGTACATAGTATGTTTGAAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CAA 90 bp TCCCAACTGGAATTCCCTTTACTTTTCAAACATACTATGTACAGGGCAACAACGAACCTTTTGATCAGGTaGCTGTGGTGTATTAGATCC +
Preference number: 5 (lower is better)
Translates to: SQLEFPLLFKHTMYRATTNLLIR*LWCIRS
Trigger: GGATCTAATACACCACAGCAACCTGATCAAAAGGTT...CGTTGTTGCCCTGTACATAGTATGTTTGAAAAGTAAAGGGAATTCCAGTTGGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CAA 90 bp GCTGGTAAAGTATTGTTTCTAGATGTGTCTGTAAGGTGTTGCCAGAGGAGACTGTTCTATGGTGGGACTTaGTCTTATAATCATATGAGC +
Preference number: 5 (lower is better)
Translates to: AGKVLFLDVSVRCCQRRLFYGGT*SYNHMS
Trigger: GCTCATATGATTATAAGACAAAGTCCCACCATAGAA...CAGTCTCCTCTGGCAACACCTTACAGACACATCTAGAAACAATACTTTACCAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507677.5
CDS-3UTR CAA 90 bp TTAAGACCTGTAGCTGCAGATTTTCTGAGCCATTCTTCCCACTGCACATGCTTTCTTATTCCATTAAGCTaGTCTGTACTTAACCAGGTT +
Preference number: 5 (lower is better)
Translates to: LRPVAADFLSHSSHCTCFLIPLS*SVLNQV
Trigger: AACCTGGTTAAGTACAGACAAGCTTAATGGAATAAG...AAAGCATGTGCAGTGGGAAGAATGGCTCAGAAAATCTGCAGCTACAGGTCTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507677.5
CDS-3UTR CAA 90 bp CTAAGACCAGCAGTCCACTTATGTTATCGAGAAGTAGGAGACGGTGATTTCATTGTGTGTGGCACAGACTaGTTGTTTGTTCACTTAAAA +
Preference number: 5 (lower is better)
Translates to: LRPAVHLCYREVGDGDFIVCGTD*LFVHLK
Trigger: TTTTAAGTGAACAAACAACAAGTCTGTGCCACACAC...AATGAAATCACCGTCTCCTACTTCTCGATAACATAAGTGGACTGCTGGTCTTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507740.5
CDS-3UTR CAA 90 bp TCCCAACTGGAATTCCCTTTACTTTTCAAACATACTATGTACAGGGCAACAACGCATACCCACATAACCTaGTTTGAGCGTAATGACACT +
Preference number: 5 (lower is better)
Translates to: SQLEFPLLFKHTMYRATTHTHIT*FERNDT
Trigger: AGTGTCATTACGCTCAAACAAGGTTATGTGGGTATG...CGTTGTTGCCCTGTACATAGTATGTTTGAAAAGTAAAGGGAATTCCAGTTGGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CAA 90 bp CTTTTCAAACATACTATGTACAGGGCAACAACGGTCACTGGCATAGTGCTAGTTAAACCACTGTGTCAGTaGTGGTTTGTGTTCTTCTTT +
Preference number: 5 (lower is better)
Translates to: LFKHTMYRATTVTGIVLVKPLCQ*WFVFFF
Trigger: AAAGAAGAACACAAACCACAACTGACACAGTGGTTT...AACTAGCACTATGCCAGTGACCGTTGTTGCCCTGTACATAGTATGTTTGAAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000668113.1
CDS TCA 90 bp TTGAAACTACAAGTTCTACTTGTGGTTCAGGTTTGGATTCTAGAATaGTGTTGTACACTTCCTCAAATGTGGCTCCTTGCAGTAGTCTTC +
Preference number: 5 (lower is better)
Translates to: LKLQVLLVVQVWILE*CCTLPQMWLLAVVF
Trigger: GAAGACTACTGCAAGGAGCCACATTTGAGGAAGTGTACAACATCATTCTAGAATCCAAACCTGAACCACAAGTAGAACTTGTAGTTTCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000262231.14
ENST00000408894.6
ENST00000436393.6
ENST00000501515.6
ENST00000504942.6
ENST00000507677.5
ENST00000507740.5
ENST00000511046.1
ENST00000512598.5
ENST00000515551.5
ENST00000632716.1
ENST00000666250.1
ENST00000668113.1
CDS TCA 90 bp GTATCTTCTATTCTGATCTCTGGACACAGATGGGCTTCTTTTCCTTaGAATAATCTTGGAGTTCAGAAGTTCAGAGGAAGTTTTCCTGTC +
Preference number: 5 (lower is better)
Translates to: VSSILISGHRWASFP*NNLGVQKFRGSFPV
Trigger: GACAGGAAAACTTCCTCTGAACTTCTGAACTCCAAGATTATTTCAAGGAAAAGAAGCCCATCTGTGTCCAGAGATCAGAATAGAAGATAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000668113.1
CDS-3UTR CAA 90 bp ACTGGAATTCCCTTTACTTTTCAAACATACTATGTACAGGGCAACAACGGTCACCTTCCAGATCAGCATTaGCCAAAGAAACATCACTAT +
Preference number: 5 (lower is better)
Translates to: TGIPFTFQTYYVQGNNGHLPDQH*PKKHHY
Trigger: ATAGTGATGTTTCTTTGGCAAATGCTGATCTGGAAG...GTGACCGTTGTTGCCCTGTACATAGTATGTTTGAAAAGTAAAGGGAATTCCAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CAA 90 bp CTAAGACCAGCAGTCCACTTATGTTATCGAGAAGTAGGAGACGGTGATTTCATTCTCGAGTTCTTTCCATaGAATAAGATCGCTGATTTT +
Preference number: 5 (lower is better)
Translates to: LRPAVHLCYREVGDGDFILEFFP*NKIADF
Trigger: AAAATCAGCGATCTTATTCAATGGAAAGAACTCGAG...AATGAAATCACCGTCTCCTACTTCTCGATAACATAAGTGGACTGCTGGTCTTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507740.5
CDS-3UTR CAA 90 bp ACTGGAATTCCCTTTACTTTTCAAACATACTATGTACAGGGCAACAACGGTCACTTTTACCGCCTTTCTTaGATTTATGAGGCTTTGGTG +
Preference number: 5 (lower is better)
Translates to: TGIPFTFQTYYVQGNNGHFYRLS*IYEALV
Trigger: CACCAAAGCCTCATAAATCAAAGAAAGGCGGTAAAA...GTGACCGTTGTTGCCCTGTACATAGTATGTTTGAAAAGTAAAGGGAATTCCAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CAA 90 bp AAGTTTTCTGGCTTCTTTCTTTTTCCTGTGCTGGATGATTCCTTTCACTCTTCCACTTGTGGTTCAGGTTaGGATTCTAGAATGATGTTG +
Preference number: 5 (lower is better)
Translates to: KFSGFFLFPVLDDSFHSSTCGSG*DSRMML
Trigger: CAACATCATTCTAGAATCCAAACCTGAACCACAAGT...GGAAGAGTGAAAGGAATCATCCAGCACAGGAAAAAGAAAGAAGCCAGAAAACTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000507677.5
CDS-3UTR CAA 90 bp GTTCTTTTAACAACTTTACCTGGGTCCATCAGAATGTCAAGACACAGTCTTGGTACTTGTGGTTCAGGTTaGGATTCTAGAATGATGTTG +
Preference number: 5 (lower is better)
Translates to: VLLTTLPGSIRMSRHSLGTCGSG*DSRMML
Trigger: CAACATCATTCTAGAATCCAAACCTGAACCACAAGT...ACCAAGACTGTGTCTTGACATTCTGATGGACCCAGGTAAAGTTGTTAAAAGAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CAA 90 bp TCCCAACTGGAATTCCCTTTACTTTTCAAACATACTATGTACAGGGCAACAACGAACTACAAGTTCTACTaGTGGTTCAGGTTTGGATTC +
Preference number: 5 (lower is better)
Translates to: SQLEFPLLFKHTMYRATTNYKFY*WFRFGF
Trigger: GAATCCAAACCTGAACCACAAGTAGAACTTGTAGTT...CGTTGTTGCCCTGTACATAGTATGTTTGAAAAGTAAAGGGAATTCCAGTTGGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CAA 90 bp ACTGGAATTCCCTTTACTTTTCAAACATACTATGTACAGGGCAACAACGGTCACATGGTGAACAGTGGTTaGATGACATTACTTGTTCTG +
Preference number: 5 (lower is better)
Translates to: TGIPFTFQTYYVQGNNGHMVNSG*MTLLVL
Trigger: CAGAACAAGTAATGTCATCAAACCACTGTTCACCAT...GTGACCGTTGTTGCCCTGTACATAGTATGTTTGAAAAGTAAAGGGAATTCCAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CAA 90 bp TCCCAACTGGAATTCCCTTTACTTTTCAAACATACTATGTACAGGGCAACAACGATGGTGAACAGTGGTTaGATGACATTACTTGTTCTG +
Preference number: 5 (lower is better)
Translates to: SQLEFPLLFKHTMYRATTMVNSG*MTLLVL
Trigger: CAGAACAAGTAATGTCATCAAACCACTGTTCACCAT...CGTTGTTGCCCTGTACATAGTATGTTTGAAAAGTAAAGGGAATTCCAGTTGGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CAA 90 bp CTTTTCAAACATACTATGTACAGGGCAACAACGGTCACTGGCATAGTGCTAGTTAGAACTCGAGTGTCATaGAATTCCAAATCTGATAGT +
Preference number: 5 (lower is better)
Translates to: LFKHTMYRATTVTGIVLVRTRVS*NSKSDS
Trigger: ACTATCAGATTTGGAATTCAATGACACTCGAGTTCT...AACTAGCACTATGCCAGTGACCGTTGTTGCCCTGTACATAGTATGTTTGAAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CAA 90 bp CTAAGACCAGCAGTCCACTTATGTTATCGAGAAGTAGGAGACGGTGATTTCATTAGAACTCGAGTGTCATaGAATTCCAAATCTGATAGT +
Preference number: 5 (lower is better)
Translates to: LRPAVHLCYREVGDGDFIRTRVS*NSKSDS
Trigger: ACTATCAGATTTGGAATTCAATGACACTCGAGTTCT...AATGAAATCACCGTCTCCTACTTCTCGATAACATAAGTGGACTGCTGGTCTTAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507740.5
CDS-3UTR CAA 90 bp AGCCACAGAATTTTGTTTTTCAGAGTCCAACACATCTTAGCATTAGTAATTGACTTCCTGACCACTTCTTaGGTCTCCTGCTTTTCACCT +
Preference number: 5 (lower is better)
Translates to: SHRILFFRVQHILALVIDFLTTS*VSCFSP
Trigger: AGGTGAAAAGCAGGAGACCAAAGAAGTGGTCAGGAA...GTCAATTACTAATGCTAAGATGTGTTGGACTCTGAAAAACAAAATTCTGTGGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CAA 90 bp TCCCAACTGGAATTCCCTTTACTTTTCAAACATACTATGTACAGGGCAACAACGTGTAGCCACAGAATTTaGTTTTTCAGAGTCCAACAC +
Preference number: 5 (lower is better)
Translates to: SQLEFPLLFKHTMYRATTCSHRI*FFRVQH
Trigger: GTGTTGGACTCTGAAAAACAAAATTCTGTGGCTACA...CGTTGTTGCCCTGTACATAGTATGTTTGAAAAGTAAAGGGAATTCCAGTTGGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CAA 90 bp ACTGGAATTCCCTTTACTTTTCAAACATACTATGTACAGGGCAACAACGGTCACAAACATGGTGTATCTTaGTATCACCCTGTTGCATTC +
Preference number: 5 (lower is better)
Translates to: TGIPFTFQTYYVQGNNGHKHGVS*YHPVAF
Trigger: GAATGCAACAGGGTGATACAAAGATACACCATGTTT...GTGACCGTTGTTGCCCTGTACATAGTATGTTTGAAAAGTAAAGGGAATTCCAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CAA 90 bp GTTCTTTTAACAACTTTACCTGGGTCCATCAGAATGTCAAGACACAGTCTTGGTTGTCAAGACACAGTCTaGGTGTATTTCATATTGCAC +
Preference number: 5 (lower is better)
Translates to: VLLTTLPGSIRMSRHSLGCQDTV*VYFILH
Trigger: GTGCAATATGAAATACACCAAGACTGTGTCTTGACA...ACCAAGACTGTGTCTTGACATTCTGATGGACCCAGGTAAAGTTGTTAAAAGAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CAA 90 bp ACTGGAATTCCCTTTACTTTTCAAACATACTATGTACAGGGCAACAACGGTCACTCGCATGGATCATTATaGAGAAAAGTAGAAGGGCTT +
Preference number: 5 (lower is better)
Translates to: TGIPFTFQTYYVQGNNGHSHGSL*RKVEGL
Trigger: AAGCCCTTCTACTTTTCTCAATAATGATCCATGCGA...GTGACCGTTGTTGCCCTGTACATAGTATGTTTGAAAAGTAAAGGGAATTCCAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507740.5
CDS-3UTR CAA 90 bp TCCCAACTGGAATTCCCTTTACTTTTCAAACATACTATGTACAGGGCAACAACGAACGAGCACAGAACTTaGTTTGGCAATATGAACAGT +
Preference number: 5 (lower is better)
Translates to: SQLEFPLLFKHTMYRATTNEHRT*FGNMNS
Trigger: ACTGTTCATATTGCCAAACAAAGTTCTGTGCTCGTT...CGTTGTTGCCCTGTACATAGTATGTTTGAAAAGTAAAGGGAATTCCAGTTGGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CAA 90 bp GTTCTTTTAACAACTTTACCTGGGTCCATCAGAATGTCAAGACACAGTCTTGGTAACGAGCACAGAACTTaGTTTGGCAATATGAACAGT +
Preference number: 5 (lower is better)
Translates to: VLLTTLPGSIRMSRHSLGNEHRT*FGNMNS
Trigger: ACTGTTCATATTGCCAAACAAAGTTCTGTGCTCGTT...ACCAAGACTGTGTCTTGACATTCTGATGGACCCAGGTAAAGTTGTTAAAAGAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CAA 90 bp CTTTTCAAACATACTATGTACAGGGCAACAACGGTCACTGGCATAGTGCTAGTTTTTTTCGGCAATGGTTaGTCATCACTTATTGTACCA +
Preference number: 5 (lower is better)
Translates to: LFKHTMYRATTVTGIVLVFFGNG*SSLIVP
Trigger: TGGTACAATAAGTGATGACAAACCATTGCCGAAAAA...AACTAGCACTATGCCAGTGACCGTTGTTGCCCTGTACATAGTATGTTTGAAAAG
40% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000666250.1
CDS-3UTR CAA 90 bp ACTGGAATTCCCTTTACTTTTCAAACATACTATGTACAGGGCAACAACGGTCACCTCGAGTTCTTTCCATaGAATAAGATCGCTGATTTT +
Preference number: 5 (lower is better)
Translates to: TGIPFTFQTYYVQGNNGHLEFFP*NKIADF
Trigger: AAAATCAGCGATCTTATTCAATGGAAAGAACTCGAG...GTGACCGTTGTTGCCCTGTACATAGTATGTTTGAAAAGTAAAGGGAATTCCAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CAA 90 bp AGCCACAGAATTTTGTTTTTCAGAGTCCAACACATCTTAGCATTAGTAATTGACATGGTTTGTGGTCCTTaGTGCATAAGAACTTGGTCC +
Preference number: 5 (lower is better)
Translates to: SHRILFFRVQHILALVIDMVCGP*CIRTWS
Trigger: GGACCAAGTTCTTATGCACAAAGGACCACAAACCAT...GTCAATTACTAATGCTAAGATGTGTTGGACTCTGAAAAACAAAATTCTGTGGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CAA 90 bp AGCCACAGAATTTTGTTTTTCAGAGTCCAACACATCTTAGCATTAGTAATTGACCTGGCACTGATAATGTaGAGCTTTGAAGATCTCGAC +
Preference number: 5 (lower is better)
Translates to: SHRILFFRVQHILALVIDLALIM*SFEDLD
Trigger: GTCGAGATCTTCAAAGCTCAACATTATCAGTGCCAG...GTCAATTACTAATGCTAAGATGTGTTGGACTCTGAAAAACAAAATTCTGTGGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CAA 90 bp ACTGGAATTCCCTTTACTTTTCAAACATACTATGTACAGGGCAACAACGGTCACAGAACTCGAGTGTCATaGAATTCCAAATCTGATAGT +
Preference number: 5 (lower is better)
Translates to: TGIPFTFQTYYVQGNNGHRTRVS*NSKSDS
Trigger: ACTATCAGATTTGGAATTCAATGACACTCGAGTTCT...GTGACCGTTGTTGCCCTGTACATAGTATGTTTGAAAAGTAAAGGGAATTCCAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CAA 90 bp ACTGGAATTCCCTTTACTTTTCAAACATACTATGTACAGGGCAACAACGGTCACAAACTGACTGATTCTTaGAGATTAATCCATGGCTTC +
Preference number: 5 (lower is better)
Translates to: TGIPFTFQTYYVQGNNGHKLTDS*RLIHGF
Trigger: GAAGCCATGGATTAATCTCAAAGAATCAGTCAGTTT...GTGACCGTTGTTGCCCTGTACATAGTATGTTTGAAAAGTAAAGGGAATTCCAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CAA 90 bp ACTGGAATTCCCTTTACTTTTCAAACATACTATGTACAGGGCAACAACGGTCACTACTCCCAAGTCATGTaGCAAAATCCTTTTCAACAT +
Preference number: 5 (lower is better)
Translates to: TGIPFTFQTYYVQGNNGHYSQVM*QNPFQH
Trigger: ATGTTGAAAAGGATTTTGCAACATGACTTGGGAGTA...GTGACCGTTGTTGCCCTGTACATAGTATGTTTGAAAAGTAAAGGGAATTCCAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CAA 90 bp GTTCTTTTAACAACTTTACCTGGGTCCATCAGAATGTCAAGACACAGTCTTGGTAGTGAGGATTTCTTGTaGTTTTCGGCACAAATTACA +
Preference number: 5 (lower is better)
Translates to: VLLTTLPGSIRMSRHSLGSEDFL*FSAQIT
Trigger: TGTAATTTGTGCCGAAAACAACAAGAAATCCTCACT...ACCAAGACTGTGTCTTGACATTCTGATGGACCCAGGTAAAGTTGTTAAAAGAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CAA 90 bp TCCCAACTGGAATTCCCTTTACTTTTCAAACATACTATGTACAGGGCAACAACGAGTGAGGATTTCTTGTaGTTTTCGGCACAAATTACA +
Preference number: 5 (lower is better)
Translates to: SQLEFPLLFKHTMYRATTSEDFL*FSAQIT
Trigger: TGTAATTTGTGCCGAAAACAACAAGAAATCCTCACT...CGTTGTTGCCCTGTACATAGTATGTTTGAAAAGTAAAGGGAATTCCAGTTGGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CAA 90 bp TCCCAACTGGAATTCCCTTTACTTTTCAAACATACTATGTACAGGGCAACAACGTTCCTTGAAATAATCTaGGAGTTCAGAAGTTCAGAG +
Preference number: 5 (lower is better)
Translates to: SQLEFPLLFKHTMYRATTFLEII*EFRSSE
Trigger: CTCTGAACTTCTGAACTCCAAGATTATTTCAAGGAA...CGTTGTTGCCCTGTACATAGTATGTTTGAAAAGTAAAGGGAATTCCAGTTGGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000668113.1
CDS-3UTR CAA 90 bp AGCCACAGAATTTTGTTTTTCAGAGTCCAACACATCTTAGCATTAGTAATTGACAAACTGAGGTTCATGTaGAGATCGCCTATCAGCATA +
Preference number: 5 (lower is better)
Translates to: SHRILFFRVQHILALVIDKLRFM*RSPISI
Trigger: TATGCTGATAGGCGATCTCAACATGAACCTCAGTTT...GTCAATTACTAATGCTAAGATGTGTTGGACTCTGAAAAACAAAATTCTGTGGCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CAA 90 bp GGTGGGACTTTGTCTTATAATCATATGAGCCAATTCTCCCTAATAAACTCCCTTGATTCTAGAATGATGTaGTACACTTCCTCAAATGTG +
Preference number: 5 (lower is better)
Translates to: GGTLSYNHMSQFSLINSLDSRMM*YTSSNV
Trigger: CACATTTGAGGAAGTGTACAACATCATTCTAGAATC...AAGGGAGTTTATTAGGGAGAATTGGCTCATATGATTATAAGACAAAGTCCCACC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507677.5
CDS-3UTR CAA 90 bp AGCCACAGAATTTTGTTTTTCAGAGTCCAACACATCTTAGCATTAGTAATTGACCATCCGATCACCATATaGGATAGCTCTAGTTCATCT +
Preference number: 5 (lower is better)
Translates to: SHRILFFRVQHILALVIDHPITI*DSSSSS
Trigger: AGATGAACTAGAGCTATCCAATATGGTGATCGGATG...GTCAATTACTAATGCTAAGATGTGTTGGACTCTGAAAAACAAAATTCTGTGGCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CAA 90 bp AGCCACAGAATTTTGTTTTTCAGAGTCCAACACATCTTAGCATTAGTAATTGACTGTGTCAGTTGTGGTTaGTGTTCTTCTTTGACCTTG +
Preference number: 5 (lower is better)
Translates to: SHRILFFRVQHILALVIDCVSCG*CSSLTL
Trigger: CAAGGTCAAAGAAGAACACAAACCACAACTGACACA...GTCAATTACTAATGCTAAGATGTGTTGGACTCTGAAAAACAAAATTCTGTGGCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000668113.1
CDS-3UTR CAA 90 bp AGCCACAGAATTTTGTTTTTCAGAGTCCAACACATCTTAGCATTAGTAATTGACACTTGTGGTTCAGGTTaGGATTCTAGAATGATGTTG +
Preference number: 5 (lower is better)
Translates to: SHRILFFRVQHILALVIDTCGSG*DSRMML
Trigger: CAACATCATTCTAGAATCCAAACCTGAACCACAAGT...GTCAATTACTAATGCTAAGATGTGTTGGACTCTGAAAAACAAAATTCTGTGGCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CAA 90 bp AGCCACAGAATTTTGTTTTTCAGAGTCCAACACATCTTAGCATTAGTAATTGACATGGTGAACAGTGGTTaGATGACATTACTTGTTCTG +
Preference number: 5 (lower is better)
Translates to: SHRILFFRVQHILALVIDMVNSG*MTLLVL
Trigger: CAGAACAAGTAATGTCATCAAACCACTGTTCACCAT...GTCAATTACTAATGCTAAGATGTGTTGGACTCTGAAAAACAAAATTCTGTGGCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CAA 90 bp AGCCACAGAATTTTGTTTTTCAGAGTCCAACACATCTTAGCATTAGTAATTGACCTTTGTATCACCCTGTaGCATTCTCTCTCCTTTTTA +
Preference number: 5 (lower is better)
Translates to: SHRILFFRVQHILALVIDLCITL*HSLSFL
Trigger: TAAAAAGGAGAGAGAATGCAACAGGGTGATACAAAG...GTCAATTACTAATGCTAAGATGTGTTGGACTCTGAAAAACAAAATTCTGTGGCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CAA 90 bp AGCCACAGAATTTTGTTTTTCAGAGTCCAACACATCTTAGCATTAGTAATTGACGGTCTATTAAATCAATaGTTGCTGGTACACAGGTGT +
Preference number: 5 (lower is better)
Translates to: SHRILFFRVQHILALVIDGLLNQ*LLVHRC
Trigger: ACACCTGTGTACCAGCAACAATTGATTTAATAGACC...GTCAATTACTAATGCTAAGATGTGTTGGACTCTGAAAAACAAAATTCTGTGGCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CAA 90 bp AGCCACAGAATTTTGTTTTTCAGAGTCCAACACATCTTAGCATTAGTAATTGACCTCGAGTTCTTTCCATaGAATAAGATCGCTGATTTT +
Preference number: 5 (lower is better)
Translates to: SHRILFFRVQHILALVIDLEFFP*NKIADF
Trigger: AAAATCAGCGATCTTATTCAATGGAAAGAACTCGAG...GTCAATTACTAATGCTAAGATGTGTTGGACTCTGAAAAACAAAATTCTGTGGCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CAA 90 bp AGCCACAGAATTTTGTTTTTCAGAGTCCAACACATCTTAGCATTAGTAATTGACGATTCTAGAATGATGTaGTACACTTCCTCAAATGTG +
Preference number: 5 (lower is better)
Translates to: SHRILFFRVQHILALVIDDSRMM*YTSSNV
Trigger: CACATTTGAGGAAGTGTACAACATCATTCTAGAATC...GTCAATTACTAATGCTAAGATGTGTTGGACTCTGAAAAACAAAATTCTGTGGCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CAA 90 bp AGCCACAGAATTTTGTTTTTCAGAGTCCAACACATCTTAGCATTAGTAATTGACAAACTGACTGATTCTTaGAGATTAATCCATGGCTTC +
Preference number: 5 (lower is better)
Translates to: SHRILFFRVQHILALVIDKLTDS*RLIHGF
Trigger: GAAGCCATGGATTAATCTCAAAGAATCAGTCAGTTT...GTCAATTACTAATGCTAAGATGTGTTGGACTCTGAAAAACAAAATTCTGTGGCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS-3UTR CAA 90 bp AGCCACAGAATTTTGTTTTTCAGAGTCCAACACATCTTAGCATTAGTAATTGACCTATTAAATCAATTGTaGCTGGTACACAGGTGTCTA +
Preference number: 5 (lower is better)
Translates to: SHRILFFRVQHILALVIDLLNQL*LVHRCL
Trigger: TAGACACCTGTGTACCAGCAACAATTGATTTAATAG...GTCAATTACTAATGCTAAGATGTGTTGGACTCTGAAAAACAAAATTCTGTGGCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000339750.3
ENST00000507740.5
ENST00000666250.1
ENST00000668113.1
CDS CCA 72 bp ACCCGCTTTTCCCGCGGTACAAGATACGCGGCGTCTTaGCGGCTGGGGCGCAGCGTCCGCAGCGGTTCCGGG +
Preference number: 6 (lower is better)
Translates to: TRFSRGTRYAAS*RLGRSVRSGSG
Trigger: CCCGGAACCGCTGCGGACGCTGCGCCCCAGCCGCCAAGACGCCGCGTATCTTGTACCGCGGGAAAAGCGGGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339750.3
ENST00000523362.5
CDS CAA 72 bp GACCCGCTTTTCCCGCGGTACAAGATACGCGGCGTCTaGGCGGCTGGGGCGCAGCGTCCGCAGCGGTTCCGG +
Preference number: 6 (lower is better)
Translates to: DPLFPRYKIRGV*AAGAQRPQRFR
Trigger: CCGGAACCGCTGCGGACGCTGCGCCCCAGCCGCCAAGACGCCGCGTATCTTGTACCGCGGGAAAAGCGGGTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339750.3
ENST00000523362.5
CDS CAA 90 bp TTGGACGAGGACCCGCTTTTCCCGCGGTACAAGATACGCGGCGTCTaGGCGGCTGGGGCGCAGCGTCCGCAGCGGTTCCGGGACCAGTGG +
Preference number: 6 (lower is better)
Translates to: LDEDPLFPRYKIRGV*AAGAQRPQRFRDQW
Trigger: CCACTGGTCCCGGAACCGCTGCGGACGCTGCGCCCCAGCCGCCAAGACGCCGCGTATCTTGTACCGCGGGAAAAGCGGGTCCTCGTCCAA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339750.3
ENST00000523362.5
CDS CCA 72 bp TTTCCCGCGGTACAAGATACGCGGCGTCTTGGCGGCTaGGGCGCAGCGTCCGCAGCGGTTCCGGGACCAGTG +
Preference number: 6 (lower is better)
Translates to: FPAVQDTRRLGG*GAASAAVPGPV
Trigger: CACTGGTCCCGGAACCGCTGCGGACGCTGCGCCCCAGCCGCCAAGACGCCGCGTATCTTGTACCGCGGGAAA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339750.3
ENST00000523362.5
CDS CCA 72 bp TATTGGAGAGGGGTCCAGAGGAGGAGATGGAGGCGGTaGCGGGCGGAGCGGCTGCTCGCAGTGAACGTCCGA +
Preference number: 6 (lower is better)
Translates to: YWRGVQRRRWRR*RAERLLAVNVR
Trigger: TCGGACGTTCACTGCGAGCAGCCGCTCCGCCCGCCACCGCCTCCATCTCCTCCTCTGGACCCCTCTCCAATA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339750.3
ENST00000523362.5
CDS CCA 72 bp ACGTGGCTTTCCTGGCCGCCGGGACCTCCAATTTATTaGAGAGGGGTCCAGAGGAGGAGATGGAGGCGGTGG +
Preference number: 6 (lower is better)
Translates to: TWLSWPPGPPIY*RGVQRRRWRRW
Trigger: CCACCGCCTCCATCTCCTCCTCTGGACCCCTCTCCAATAAATTGGAGGTCCCGGCGGCCAGGAAAGCCACGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339750.3
ENST00000523362.5
CDS CCA 72 bp CGGCACCGGCGCGGCGGCTGGGGCAGCCTCCAGCGCTaGGACAAATACATACAAATCAATGGCCTTCAATCC +
Preference number: 6 (lower is better)
Translates to: RHRRGGWGSLQR*DKYIQINGLQS
Trigger: GGATTGAAGGCCATTGATTTGTATGTATTTGTCCCAGCGCTGGAGGCTGCCCCAGCCGCCGCGCCGGTGCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000504942.6
ENST00000632716.1
ENST00000666250.1
ENST00000668113.1
CDS CAA 72 bp GGCCCCTTCGTCCTGCGACTGGAGTACTTGATGGGCTaGTCTGGACAGACCCAGTACGAGGATGAGACCTCG +
Preference number: 6 (lower is better)
Translates to: GPFVLRLEYLMG*SGQTQYEDETS
Trigger: CGAGGTCTCATCCTCGTACTGGGTCTGTCCAGACAAGCCCATCAAGTACTCCAGTCGCAGGACGAAGGGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262231.14
ENST00000408894.6
ENST00000504942.6
ENST00000507740.5
ENST00000632716.1
ENST00000666250.1
ENST00000668113.1
CDS CAA 72 bp GGCCCCTTCGTCCTGCGACTGGAGTACTTGATGGGCTaGTCTGGACAGACCCAGTACGAGGATGAGACCTGC +
Preference number: 6 (lower is better)
Translates to: GPFVLRLEYLMG*SGQTQYEDETC
Trigger: GCAGGTCTCATCCTCGTACTGGGTCTGTCCAGACAAGCCCATCAAGTACTCCAGTCGCAGGACGAAGGGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436393.6
CDS CAA 90 bp GAAGCTGTCGGCCCCTTCGTCCTGCGACTGGAGTACTTGATGGGCTaGTCTGGACAGACCCAGTACGAGGATGAGACCTGCCATCCCTGT +
Preference number: 6 (lower is better)
Translates to: EAVGPFVLRLEYLMG*SGQTQYEDETCHPC
Trigger: ACAGGGATGGCAGGTCTCATCCTCGTACTGGGTCTGTCCAGACAAGCCCATCAAGTACTCCAGTCGCAGGACGAAGGGGCCGACAGCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436393.6
CDS CAA 90 bp GAAGCTGTCGGCCCCTTCGTCCTGCGACTGGAGTACTTGATGGGCTaGTCTGGACAGACCCAGTACGAGGATGAGACCTCGATAAGGCAG +
Preference number: 6 (lower is better)
Translates to: EAVGPFVLRLEYLMG*SGQTQYEDETSIRQ
Trigger: CTGCCTTATCGAGGTCTCATCCTCGTACTGGGTCTGTCCAGACAAGCCCATCAAGTACTCCAGTCGCAGGACGAAGGGGCCGACAGCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262231.14
ENST00000408894.6
ENST00000504942.6
ENST00000507740.5
ENST00000632716.1
ENST00000666250.1
ENST00000668113.1
CDS CAA 90 bp CCAACGATAGCTACCATTTTGGCACCAAGGCTAGAGCGCCGCTTTTaGCCACTGGTGCCCAAGGTGCCCACTGCAGTGTCAGACTGGCTG +
Preference number: 6 (lower is better)
Translates to: PTIATILAPRLERRF*PLVPKVPTAVSDWL
Trigger: CAGCCAGTCTGACACTGCAGTGGGCACCTTGGGCACCAGTGGCAAAAAGCGGCGCTCTAGCCTTGGTGCCAAAATGGTAGCTATCGTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000408894.6
ENST00000436393.6
ENST00000666250.1
CDS TCA 72 bp AAGCTGTCGGCCCCTTCGTCCTGCGACTGGAGTACTTaGTGGGCTTGTCTGGACAGACCCAGTACGAGGATG +
Preference number: 6 (lower is better)
Translates to: KLSAPSSCDWST*WACLDRPSTRM
Trigger: CATCCTCGTACTGGGTCTGTCCAGACAAGCCCATCAAGTACTCCAGTCGCAGGACGAAGGGGCCGACAGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000262231.14
ENST00000408894.6
ENST00000436393.6
ENST00000504942.6
ENST00000507740.5
ENST00000632716.1
ENST00000666250.1
ENST00000668113.1
CDS CAA 72 bp GAAGCTGTCGGCCCCTTCGTCCTGCGACTGGAGTACTaGATGGGCTTGTCTGGACAGACCCAGTACGAGGAT +
Preference number: 6 (lower is better)
Translates to: EAVGPFVLRLEY*MGLSGQTQYED
Trigger: ATCCTCGTACTGGGTCTGTCCAGACAAGCCCATCAAGTACTCCAGTCGCAGGACGAAGGGGCCGACAGCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000262231.14
ENST00000408894.6
ENST00000436393.6
ENST00000504942.6
ENST00000507740.5
ENST00000632716.1
ENST00000666250.1
ENST00000668113.1
CDS CAA 72 bp GCTACCATTTTGGCACCAAGGCTAGAGCGCCGCTTTTaGCCACTGGTGCCCAAGGTGCCCACTGCAGTGTCA +
Preference number: 6 (lower is better)
Translates to: ATILAPRLERRF*PLVPKVPTAVS
Trigger: TGACACTGCAGTGGGCACCTTGGGCACCAGTGGCAAAAAGCGGCGCTCTAGCCTTGGTGCCAAAATGGTAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000408894.6
ENST00000436393.6
ENST00000666250.1
CDS CCA 72 bp GGTTTGTATCAGGACGTTCAGTGGATCTGGAGCGGGTaGTGGTCCGCTCAAGGAGAGGCCGTTGTTCTGTTG +
Preference number: 6 (lower is better)
Translates to: GLYQDVQWIWSG*WSAQGEAVVLL
Trigger: CAACAGAACAACGGCCTCTCCTTGAGCGGACCACCACCCGCTCCAGATCCACTGAACGTCCTGATACAAACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000262231.14
ENST00000408894.6
ENST00000504942.6
ENST00000507740.5
ENST00000632716.1
ENST00000666250.1
ENST00000668113.1
CDS CCA 72 bp CCACTGGTGCCCAAGGTGCCCACTGCAGTGTCAGACTaGCTGCCATCATTCTTCTCCAGTGAGCACATGTCT +
Preference number: 6 (lower is better)
Translates to: PLVPKVPTAVSD*LPSFFSSEHMS
Trigger: AGACATGTGCTCACTGGAGAAGAATGATGGCAGCCAGTCTGACACTGCAGTGGGCACCTTGGGCACCAGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000408894.6
ENST00000436393.6
ENST00000666250.1
CDS CCA 72 bp TTGTATCAGGACGTTCAGTGGATCTGGAGCGGGTGGTaGTCCGCTCAAGGAGAGGCCGTTGTTCTGTTGATC +
Preference number: 6 (lower is better)
Translates to: LYQDVQWIWSGW*SAQGEAVVLLI
Trigger: GATCAACAGAACAACGGCCTCTCCTTGAGCGGACCACCACCCGCTCCAGATCCACTGAACGTCCTGATACAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000262231.14
ENST00000408894.6
ENST00000504942.6
ENST00000507740.5
ENST00000632716.1
ENST00000666250.1
ENST00000668113.1
CDS CCA 72 bp TGCTTTTCTATCCAACGTTCCCTTTGGTGGAAGCTGTaGAAGCTGTCGGCCCCTTCGTCCTGCGACTGGAGT +
Preference number: 6 (lower is better)
Translates to: CFSIQRSLWWKL*KLSAPSSCDWS
Trigger: ACTCCAGTCGCAGGACGAAGGGGCCGACAGCTTCCACAGCTTCCACCAAAGGGAACGTTGGATAGAAAAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262231.14
ENST00000504942.6
ENST00000507740.5
ENST00000668113.1
CDS TCA 72 bp GGTGGTGGTCCGCTCAAGGAGAGGCCGTTGTTCTGTTaGTCTGGATCTGTGATATGGCTGTCTATCTGCTGC +
Preference number: 6 (lower is better)
Translates to: GGGPLKERPLFC*SGSVIWLSICC
Trigger: GCAGCAGATAGACAGCCATATCACAGATCCAGATCAACAGAACAACGGCCTCTCCTTGAGCGGACCACCACC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000262231.14
ENST00000408894.6
ENST00000504942.6
ENST00000507740.5
ENST00000632716.1
ENST00000666250.1
ENST00000668113.1
CDS CCA 72 bp ATTGTTTCTATCCAACGTTCCCTTTGGTGGAAGCTGTaGAAGCTGTCGGCCCCTTCGTCCTGCGACTGGAGT +
Preference number: 6 (lower is better)
Translates to: IVSIQRSLWWKL*KLSAPSSCDWS
Trigger: ACTCCAGTCGCAGGACGAAGGGGCCGACAGCTTCCACAGCTTCCACCAAAGGGAACGTTGGATAGAAACAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000408894.6
ENST00000436393.6
ENST00000666250.1
CDS CCA 72 bp CTTGACTCCATTGTTTCTATCCAACGTTCCCTTTGGTaGAAGCTGTGGAAGCTGTCGGCCCCTTCGTCCTGC +
Preference number: 6 (lower is better)
Translates to: LDSIVSIQRSLW*KLWKLSAPSSC
Trigger: GCAGGACGAAGGGGCCGACAGCTTCCACAGCTTCCACCAAAGGGAACGTTGGATAGAAACAATGGAGTCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000408894.6
ENST00000436393.6
ENST00000666250.1
CDS CCA 72 bp CTCCTTGACTCCATTGTTTCTATCCAACGTTCCCTTTaGTGGAAGCTGTGGAAGCTGTCGGCCCCTTCGTCC +
Preference number: 6 (lower is better)
Translates to: LLDSIVSIQRSL*WKLWKLSAPSS
Trigger: GGACGAAGGGGCCGACAGCTTCCACAGCTTCCACCAAAGGGAACGTTGGATAGAAACAATGGAGTCAAGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000408894.6
ENST00000436393.6
ENST00000666250.1
CDS CAA 72 bp CCTCCTGGGGGTAGGAGGACTATGGTTTGTGGTCCTTaGTGCATAAGAACTTGGTCCCTGAGCCTCTCGAGT +
Preference number: 6 (lower is better)
Translates to: PPGGRRTMVCGP*CIRTWSLSLSS
Trigger: ACTCGAGAGGCTCAGGGACCAAGTTCTTATGCACAAAGGACCACAAACCATAGTCCTCCTACCCCCAGGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000262231.14
ENST00000408894.6
ENST00000436393.6
ENST00000504942.6
ENST00000507740.5
ENST00000515551.5
ENST00000632716.1
ENST00000666250.1
ENST00000668113.1
CDS CAA 72 bp GGGTGGTGGTCCGCTCAAGGAGAGGCCGTTGTTCTGTaGATCTGGATCTGTGATATGGCTGTCTATCTGCTG +
Preference number: 6 (lower is better)
Translates to: GWWSAQGEAVVL*IWICDMAVYLL
Trigger: CAGCAGATAGACAGCCATATCACAGATCCAGATCAACAGAACAACGGCCTCTCCTTGAGCGGACCACCACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000262231.14
ENST00000408894.6
ENST00000504942.6
ENST00000507740.5
ENST00000632716.1
ENST00000666250.1
ENST00000668113.1
CDS CCA 72 bp TTTGACCTTTGCAACCTCCGTGTTGGGCTCTCTCCATaGAGCTGTCTTCGTGGCATATATGGAGAAGGGTGG +
Preference number: 6 (lower is better)
Translates to: FDLCNLRVGLSP*SCLRGIYGEGW
Trigger: CCACCCTTCTCCATATATGCCACGAAGACAGCTCCATGGAGAGAGCCCAACACGGAGGTTGCAAAGGTCAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000262231.14
ENST00000408894.6
ENST00000436393.6
ENST00000504942.6
ENST00000507677.5
ENST00000507740.5
ENST00000632716.1
ENST00000666250.1
ENST00000668113.1
CDS CAA 90 bp ATCTGGAGCGGGTGGTGGTCCGCTCAAGGAGAGGCCGTTGTTCTGTaGATCTGGATCTGTGATATGGCTGTCTATCTGCTGCTTCACAAT +
Preference number: 6 (lower is better)
Translates to: IWSGWWSAQGEAVVL*IWICDMAVYLLLHN
Trigger: ATTGTGAAGCAGCAGATAGACAGCCATATCACAGATCCAGATCAACAGAACAACGGCCTCTCCTTGAGCGGACCACCACCCGCTCCAGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000262231.14
ENST00000408894.6
ENST00000504942.6
ENST00000507740.5
ENST00000632716.1
ENST00000666250.1
ENST00000668113.1
CDS TCA 72 bp TGGAACCTGGTTTTACAACAAGGCCACGGGCCCGGATaGTTTCTACCTCCAGCTGTCCCTTTTTGTCCATCA +
Preference number: 6 (lower is better)
Translates to: WNLVLQQGHGPG*FLPPAVPFCPS
Trigger: TGATGGACAAAAAGGGACAGCTGGAGGTAGAAATCATCCGGGCCCGTGGCCTTGTTGTAAAACCAGGTTCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000262231.14
ENST00000339750.3
ENST00000408894.6
ENST00000436393.6
ENST00000504942.6
ENST00000507740.5
ENST00000523362.5
ENST00000666250.1
ENST00000668113.1
CDS TCA 72 bp CGTTTGGCTGAGCTGAGAAGCACTGCGACTTTTCCGTaGCAGACCAACGATAGCTACCATTTTGGCACCAAG +
Preference number: 6 (lower is better)
Translates to: RLAELRSTATFP*QTNDSYHFGTK
Trigger: CTTGGTGCCAAAATGGTAGCTATCGTTGGTCTGTCACGGAAAAGTCGCAGTGCTTCTCAGCTCAGCCAAACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000408894.6
ENST00000436393.6
ENST00000666250.1
CDS GCA 72 bp TGGTTGCCAGGTTACAGGGTGCAAAGACATTGGGGATaGCTCACTGCTATGCCAAGACGTATGATCCAACCA +
Preference number: 6 (lower is better)
Translates to: WLPGYRVQRHWG*LTAMPRRMIQP
Trigger: TGGTTGGATCATACGTCTTGGCATAGCAGTGAGGCATCCCCAATGTCTTTGCACCCTGTAACCTGGCAACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000408894.6
ENST00000436393.6
ENST00000504942.6
ENST00000507740.5
ENST00000515551.5
ENST00000632716.1
ENST00000666250.1
CDS CCA 72 bp CACTTTTACATACGGTGCTGGCAGTGTCTTGGAACCTaGTTTTACAACAAGGCCACGGGCCCGGATGATTTC +
Preference number: 6 (lower is better)
Translates to: HFYIRCWQCLGT*FYNKATGPDDF
Trigger: GAAATCATCCGGGCCCGTGGCCTTGTTGTAAAACCAGGTTCCAAGACACTGCCAGCACCGTATGTAAAAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000262231.14
ENST00000339750.3
ENST00000408894.6
ENST00000436393.6
ENST00000504942.6
ENST00000507740.5
ENST00000523362.5
ENST00000666250.1
ENST00000668113.1
CDS CAA 90 bp CCTTCTCTCATGCCGTGCTCGGGACACTTCAGCATGGATCCGCATTaGTTCTTCATAGGGTTGTGGCTTTACTGGATAACGGGCCAAATT +
Preference number: 6 (lower is better)
Translates to: PSLMPCSGHFSMDPH*FFIGLWLYWITGQI
Trigger: AATTTGGCCCGTTATCCAGTAAAGCCACAACCCTATGAAGAACAAATGCGGATCCATGCTGAAGTGTCCCGAGCACGGCATGAGAGAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000262231.14
ENST00000408894.6
ENST00000436393.6
ENST00000504942.6
ENST00000507740.5
ENST00000515551.5
ENST00000632716.1
ENST00000666250.1
ENST00000668113.1
CDS TCA 72 bp TGGATAACGGGCCAAATTCGGATCACTTCGGTAGCGTaGCTGGTACTCTTCCTCTCTCCTTTGCCTTTCGTA +
Preference number: 6 (lower is better)
Translates to: WITGQIRITSVA*LVLFLSPLPFV
Trigger: TACGAAAGGCAAAGGAGAGAGGAAGAGTACCAGTCACGCTACCGAAGTGATCCGAATTTGGCCCGTTATCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000262231.14
ENST00000408894.6
ENST00000436393.6
ENST00000504942.6
ENST00000507740.5
ENST00000515551.5
ENST00000632716.1
ENST00000666250.1
ENST00000668113.1
CDS GCA 72 bp TGCCAAAGAAACATCACTATGCCTTCTCTCATGCCGTaGTCGGGACACTTCAGCATGGATCCGCATTTGTTC +
Preference number: 6 (lower is better)
Translates to: CQRNITMPSLMP*SGHFSMDPHLF
Trigger: GAACAAATGCGGATCCATGCTGAAGTGTCCCGAGCACGGCATGAGAGAAGGCATAGTGATGTTTCTTTGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000262231.14
ENST00000408894.6
ENST00000436393.6
ENST00000504942.6
ENST00000507740.5
ENST00000515551.5
ENST00000632716.1
ENST00000666250.1
ENST00000668113.1
CDS GCA 72 bp GCATTTGCCAAAGAAACATCACTATGCCTTCTCTCATaGCGTGCTCGGGACACTTCAGCATGGATCCGCATT +
Preference number: 6 (lower is better)
Translates to: AFAKETSLCLLS*RARDTSAWIRI
Trigger: AATGCGGATCCATGCTGAAGTGTCCCGAGCACGGCATGAGAGAAGGCATAGTGATGTTTCTTTGGCAAATGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000262231.14
ENST00000408894.6
ENST00000436393.6
ENST00000504942.6
ENST00000507740.5
ENST00000515551.5
ENST00000632716.1
ENST00000666250.1
ENST00000668113.1
CDS CAA 72 bp ATGCCGTGCTCGGGACACTTCAGCATGGATCCGCATTaGTTCTTCATAGGGTTGTGGCTTTACTGGATAACG +
Preference number: 6 (lower is better)
Translates to: MPCSGHFSMDPH*FFIGLWLYWIT
Trigger: CGTTATCCAGTAAAGCCACAACCCTATGAAGAACAAATGCGGATCCATGCTGAAGTGTCCCGAGCACGGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000262231.14
ENST00000408894.6
ENST00000436393.6
ENST00000504942.6
ENST00000507740.5
ENST00000515551.5
ENST00000632716.1
ENST00000666250.1
ENST00000668113.1
CDS CAA 72 bp GGCGCATTTTACCGCCTTTCTTTGATTTATGAGGCTTaGGTGGTGGAGGTCTCACTGACTCTGACTGGTCTG +
Preference number: 6 (lower is better)
Translates to: GAFYRLSLIYEA*VVEVSLTLTGL
Trigger: CAGACCAGTCAGAGTCAGTGAGACCTCCACCACCAAAGCCTCATAAATCAAAGAAAGGCGGTAAAATGCGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000262231.14
ENST00000408894.6
ENST00000436393.6
ENST00000504942.6
ENST00000507740.5
ENST00000515551.5
ENST00000632716.1
ENST00000666250.1
ENST00000668113.1
CDS CAA 90 bp TGCTCGGGACACTTCAGCATGGATCCGCATTTGTTCTTCATAGGGTaGTGGCTTTACTGGATAACGGGCCAAATTCGGATCACTTCGGTA +
Preference number: 6 (lower is better)
Translates to: CSGHFSMDPHLFFIG*WLYWITGQIRITSV
Trigger: TACCGAAGTGATCCGAATTTGGCCCGTTATCCAGTAAAGCCACAACCCTATGAAGAACAAATGCGGATCCATGCTGAAGTGTCCCGAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000262231.14
ENST00000408894.6
ENST00000436393.6
ENST00000504942.6
ENST00000507740.5
ENST00000515551.5
ENST00000632716.1
ENST00000666250.1
ENST00000668113.1
CDS CAA 90 bp ATAAGTCACCTGAGGGTCCTTGGAACTGGGTCTGCTCATGTAGTTTaGGTTTCTTCTCCTGAGGTGCCTCCTCATTTCTTAGCCCTCGAA +
Preference number: 6 (lower is better)
Translates to: ISHLRVLGTGSAHVV*VSSPEVPPHFLALE
Trigger: TTCGAGGGCTAAGAAATGAGGAGGCACCTCAGGAGAAGAAACCAAAACTACATGAGCAGACCCAGTTCCAAGGACCCTCAGGTGACTTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395361.3
ENST00000504942.6
ENST00000632716.1
ENST00000666250.1
ENST00000668113.1
CDS TCA 72 bp ACTTGTATATTCAGGCGTGGAAGCCAATTCCTCCTCTaGACTGCTCAACGAAATCTGGCGCATTTTACCGCC +
Preference number: 6 (lower is better)
Translates to: TCIFRRGSQFLL*TAQRNLAHFTA
Trigger: GGCGGTAAAATGCGCCAGATTTCGTTGAGCAGTTCAGAGGAGGAATTGGCTTCCACGCCTGAATATACAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000262231.14
ENST00000408894.6
ENST00000436393.6
ENST00000504942.6
ENST00000507740.5
ENST00000515551.5
ENST00000632716.1
ENST00000666250.1
ENST00000668113.1
CDS TCA 72 bp TCAAGGAGAGGCCGTTGTTCTGTTGATCTGGATCTGTaGTATGGCTGTCTATCTGCTGCTTCACAATCCCTG +
Preference number: 6 (lower is better)
Translates to: SRRGRCSVDLDL*YGCLSAASQSL
Trigger: CAGGGATTGTGAAGCAGCAGATAGACAGCCATATCACAGATCCAGATCAACAGAACAACGGCCTCTCCTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000262231.14
ENST00000408894.6
ENST00000504942.6
ENST00000507740.5
ENST00000632716.1
ENST00000666250.1
ENST00000668113.1
CDS TCA 72 bp AACTGGGTCTGCTCATGTAGTTTTGGTTTCTTCTCCTaGGGTGCCTCCTCATTTCTTAGCCCTCGAAGAACC +
Preference number: 6 (lower is better)
Translates to: NWVCSCSFGFFS*GASSFLSPRRT
Trigger: GGTTCTTCGAGGGCTAAGAAATGAGGAGGCACCTCAGGAGAAGAAACCAAAACTACATGAGCAGACCCAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395361.3
ENST00000504942.6
ENST00000632716.1
ENST00000666250.1
ENST00000668113.1
CDS GCA 72 bp GGTTGCCAGGTTACAGGGTGCTTATCACTATGGCTATaGTCCTCGTTAAGGGTTGTGCTACTACACGTATCT +
Preference number: 6 (lower is better)
Translates to: GCQVTGCLSLWL*SSLRVVLLHVS
Trigger: AGATACGTGTAGTAGCACAACCCTTAACGAGGAGCATAGCCATAGTGATAAGCACCCTGTAACCTGGCAACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262231.14
ENST00000668113.1
CDS CCA 72 bp GATCCGCATTTGTTCTTCATAGGGTTGTGGCTTTACTaGATAACGGGCCAAATTCGGATCACTTCGGTAGCG +
Preference number: 6 (lower is better)
Translates to: DPHLFFIGLWLY*ITGQIRITSVA
Trigger: CGCTACCGAAGTGATCCGAATTTGGCCCGTTATCCAGTAAAGCCACAACCCTATGAAGAACAAATGCGGATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000262231.14
ENST00000408894.6
ENST00000436393.6
ENST00000504942.6
ENST00000507740.5
ENST00000515551.5
ENST00000632716.1
ENST00000666250.1
ENST00000668113.1
CDS CCA 72 bp TCCACTGCAGGTACAGATAAGTCACCTGAGGGTCCTTaGAACTGGGTCTGCTCATGTAGTTTTGGTTTCTTC +
Preference number: 6 (lower is better)
Translates to: STAGTDKSPEGP*NWVCSCSFGFF
Trigger: GAAGAAACCAAAACTACATGAGCAGACCCAGTTCCAAGGACCCTCAGGTGACTTATCTGTACCTGCAGTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395361.3
ENST00000504942.6
ENST00000632716.1
ENST00000666250.1
ENST00000668113.1
CDS CAA 72 bp CTGAGGGTCCTTGGAACTGGGTCTGCTCATGTAGTTTaGGTTTCTTCTCCTGAGGTGCCTCCTCATTTCTTA +
Preference number: 6 (lower is better)
Translates to: LRVLGTGSAHVV*VSSPEVPPHFL
Trigger: TAAGAAATGAGGAGGCACCTCAGGAGAAGAAACCAAAACTACATGAGCAGACCCAGTTCCAAGGACCCTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395361.3
ENST00000504942.6
ENST00000632716.1
ENST00000666250.1
ENST00000668113.1
CDS CAA 90 bp CCTCTGAACTGCTCAACGAAATCTGGCGCATTTTACCGCCTTTCTTaGATTTATGAGGCTTTGGTGGTGGAGGTCTCACTGACTCTGACT +
Preference number: 6 (lower is better)
Translates to: PLNCSTKSGAFYRLS*IYEALVVEVSLTLT
Trigger: AGTCAGAGTCAGTGAGACCTCCACCACCAAAGCCTCATAAATCAAAGAAAGGCGGTAAAATGCGCCAGATTTCGTTGAGCAGTTCAGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000262231.14
ENST00000408894.6
ENST00000436393.6
ENST00000504942.6
ENST00000507740.5
ENST00000515551.5
ENST00000632716.1
ENST00000666250.1
ENST00000668113.1
CDS TCA 72 bp CTGAGGTTCATGTTGAGATCGCCTATCAGCATAATCTaGTGGAGATCTAGGCATTGCGGTATCCGAAGTAGC +
Preference number: 6 (lower is better)
Translates to: LRFMLRSPISII*WRSRHCGIRSS
Trigger: GCTACTTCGGATACCGCAATGCCTAGATCTCCATCAGATTATGCTGATAGGCGATCTCAACATGAACCTCAG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000262231.14
ENST00000408894.6
ENST00000436393.6
ENST00000504942.6
ENST00000507740.5
ENST00000515551.5
ENST00000632716.1
ENST00000666250.1
ENST00000668113.1
CDS TCA 72 bp AGAACTTGGTCCCTGAGCCTCTCGAGTTCTTTCCATTaGATAAGATCGCTGATTTTCCATGGCAGCTCTACG +
Preference number: 6 (lower is better)
Translates to: RTWSLSLSSSFH*IRSLIFHGSST
Trigger: CGTAGAGCTGCCATGGAAAATCAGCGATCTTATTCAATGGAAAGAACTCGAGAGGCTCAGGGACCAAGTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000262231.14
ENST00000408894.6
ENST00000436393.6
ENST00000504942.6
ENST00000507740.5
ENST00000515551.5
ENST00000632716.1
ENST00000666250.1
ENST00000668113.1
CDS TCA 72 bp CAGATCTTCCAGTCATTAATGAAGGCATCGACCTCATaGGGTTTGTATCAGGACGTTCAGTGGATCTGGAGC +
Preference number: 6 (lower is better)
Translates to: QIFQSLMKASTS*GLYQDVQWIWS
Trigger: GCTCCAGATCCACTGAACGTCCTGATACAAACCTCATGAGGTCGATGCCTTCATTAATGACTGGAAGATCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000262231.14
ENST00000408894.6
ENST00000504942.6
ENST00000507740.5
ENST00000632716.1
ENST00000666250.1
ENST00000668113.1
CDS GCA 72 bp AGGTTACAGGGTGCAAAGACATTGGGGATGCCTCACTaGTATGCCAAGACGTATGATCCAACCAGTTGTAAT +
Preference number: 6 (lower is better)
Translates to: RLQGAKTLGMPH*YAKTYDPTSCN
Trigger: ATTACAACTGGTTGGATCATACGTCTTGGCATAGCAGTGAGGCATCCCCAATGTCTTTGCACCCTGTAACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000408894.6
ENST00000436393.6
ENST00000504942.6
ENST00000507740.5
ENST00000515551.5
ENST00000632716.1
ENST00000666250.1
CDS CAA 72 bp CACTTCAGCATGGATCCGCATTTGTTCTTCATAGGGTaGTGGCTTTACTGGATAACGGGCCAAATTCGGATC +
Preference number: 6 (lower is better)
Translates to: HFSMDPHLFFIG*WLYWITGQIRI
Trigger: GATCCGAATTTGGCCCGTTATCCAGTAAAGCCACAACCCTATGAAGAACAAATGCGGATCCATGCTGAAGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000262231.14
ENST00000408894.6
ENST00000436393.6
ENST00000504942.6
ENST00000507740.5
ENST00000515551.5
ENST00000632716.1
ENST00000666250.1
ENST00000668113.1
CDS CAA 72 bp TGCTCAACGAAATCTGGCGCATTTTACCGCCTTTCTTaGATTTATGAGGCTTTGGTGGTGGAGGTCTCACTG +
Preference number: 6 (lower is better)
Translates to: CSTKSGAFYRLS*IYEALVVEVSL
Trigger: CAGTGAGACCTCCACCACCAAAGCCTCATAAATCAAAGAAAGGCGGTAAAATGCGCCAGATTTCGTTGAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000262231.14
ENST00000408894.6
ENST00000436393.6
ENST00000504942.6
ENST00000507740.5
ENST00000515551.5
ENST00000632716.1
ENST00000666250.1
ENST00000668113.1
CDS CAA 72 bp TATCACTTATTCTCTTTGACCTTTGCAACCTCCGTGTaGGGCTCTCTCCATGGAGCTGTCTTCGTGGCATAT +
Preference number: 6 (lower is better)
Translates to: YHLFSLTFATSV*GSLHGAVFVAY
Trigger: ATATGCCACGAAGACAGCTCCATGGAGAGAGCCCAACACGGAGGTTGCAAAGGTCAAAGAGAATAAGTGATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000262231.14
ENST00000408894.6
ENST00000436393.6
ENST00000504942.6
ENST00000507677.5
ENST00000507740.5
ENST00000632716.1
ENST00000666250.1
ENST00000668113.1
CDS CAA 72 bp ATTCCACTAAAGGGAAACCACTGTGTCAGTTGTGGTTaGTGTTCTTCTTTGACCTTGAGCACGGACTGCTCC +
Preference number: 6 (lower is better)
Translates to: IPLKGNHCVSCG*CSSLTLSTDCS
Trigger: GGAGCAGTCCGTGCTCAAGGTCAAAGAAGAACACAAACCACAACTGACACAGTGGTTTCCCTTTAGTGGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000668113.1
CDS TCA 72 bp GACCATGATCTAGTCCTTCCTATAACATCTACTCGATaGGGAGACCCTGATGGTGAACAGTGGTTTGATGAC +
Preference number: 6 (lower is better)
Translates to: DHDLVLPITSTR*GDPDGEQWFDD
Trigger: GTCATCAAACCACTGTTCACCATCAGGGTCTCCTCATCGAGTAGATGTTATAGGAAGGACTAGATCATGGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000262231.14
ENST00000408894.6
ENST00000436393.6
ENST00000504942.6
ENST00000507677.5
ENST00000507740.5
ENST00000632716.1
ENST00000666250.1
ENST00000668113.1
CDS TCA 72 bp GGTGAATGCCTGTCTGAAGCTATGTCACTGGCAATGTaGTGCTTCACGCCTGACCCATTTTTAATAGAATGC +
Preference number: 6 (lower is better)
Translates to: GECLSEAMSLAM*CFTPDPFLIEC
Trigger: GCATTCTATTAAAAATGGGTCAGGCGTGAAGCATCACATTGCCAGTGACATAGCTTCAGACAGGCATTCACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395361.3
CDS TCA 72 bp AAAGACACTGATTTTCTTGTTTCCTCCTGGGCGTTCTaGTTGGACAGACATGTAGCTTGTGCTGCTGAAACG +
Preference number: 6 (lower is better)
Translates to: KDTDFLVSSWAF*LDRHVACAAET
Trigger: CGTTTCAGCAGCACAAGCTACATGTCTGTCCAATCAGAACGCCCAGGAGGAAACAAGAAAATCAGTGTCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000408894.6
ENST00000666250.1
CDS CCA 72 bp TTCAGCATGGATCCGCATTTGTTCTTCATAGGGTTGTaGCTTTACTGGATAACGGGCCAAATTCGGATCACT +
Preference number: 6 (lower is better)
Translates to: FSMDPHLFFIGL*LYWITGQIRIT
Trigger: AGTGATCCGAATTTGGCCCGTTATCCAGTAAAGCCACAACCCTATGAAGAACAAATGCGGATCCATGCTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000262231.14
ENST00000408894.6
ENST00000436393.6
ENST00000504942.6
ENST00000507740.5
ENST00000515551.5
ENST00000632716.1
ENST00000666250.1
ENST00000668113.1
CDS CAA 72 bp AAGAACTTGGTCCCTGAGCCTCTCGAGTTCTTTCCATaGAATAAGATCGCTGATTTTCCATGGCAGCTCTAC +
Preference number: 6 (lower is better)
Translates to: KNLVPEPLEFFP*NKIADFPWQLY
Trigger: GTAGAGCTGCCATGGAAAATCAGCGATCTTATTCAATGGAAAGAACTCGAGAGGCTCAGGGACCAAGTTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000262231.14
ENST00000408894.6
ENST00000436393.6
ENST00000504942.6
ENST00000507740.5
ENST00000515551.5
ENST00000632716.1
ENST00000666250.1
ENST00000668113.1
CDS CAA 72 bp GAGGACTATGGTTTGTGGTCCTTTGTGCATAAGAACTaGGTCCCTGAGCCTCTCGAGTTCTTTCCATTGAAT +
Preference number: 6 (lower is better)
Translates to: EDYGLWSFVHKN*VPEPLEFFPLN
Trigger: ATTCAATGGAAAGAACTCGAGAGGCTCAGGGACCAAGTTCTTATGCACAAAGGACCACAAACCATAGTCCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000262231.14
ENST00000408894.6
ENST00000436393.6
ENST00000504942.6
ENST00000507740.5
ENST00000515551.5
ENST00000632716.1
ENST00000666250.1
ENST00000668113.1
CDS TCA 72 bp GGTGCCTCCTCATTTCTTAGCCCTCGAAGAACCTTTTaGTCAGGTTGCTGTGGTGTATTAGATCCACTATTA +
Preference number: 6 (lower is better)
Translates to: GASSFLSPRRTF*SGCCGVLDPLL
Trigger: TAATAGTGGATCTAATACACCACAGCAACCTGATCAAAAGGTTCTTCGAGGGCTAAGAAATGAGGAGGCACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395361.3
ENST00000504942.6
ENST00000632716.1
ENST00000666250.1
ENST00000668113.1
CDS TCA 72 bp AACCAATGCACATCTGTCGAGCATGAAGCATCATGTTaGCAAAAATACATCAACAGTGTGCCAGGCAGTGCT +
Preference number: 6 (lower is better)
Translates to: NQCTSVEHEASC*QKYINSVPGSA
Trigger: AGCACTGCCTGGCACACTGTTGATGTATTTTTGTCAACATGATGCTTCATGCTCGACAGATGTGCATTGGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000436393.6
CDS CAA 90 bp TTTGTGCATAAGAACTTGGTCCCTGAGCCTCTCGAGTTCTTTCCATaGAATAAGATCGCTGATTTTCCATGGCAGCTCTACGTTCTGATA +
Preference number: 6 (lower is better)
Translates to: FVHKNLVPEPLEFFP*NKIADFPWQLYVLI
Trigger: TATCAGAACGTAGAGCTGCCATGGAAAATCAGCGATCTTATTCAATGGAAAGAACTCGAGAGGCTCAGGGACCAAGTTCTTATGCACAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000262231.14
ENST00000408894.6
ENST00000436393.6
ENST00000504942.6
ENST00000507740.5
ENST00000515551.5
ENST00000632716.1
ENST00000666250.1
ENST00000668113.1
CDS TCA 72 bp GACCCATTTTTAATAGAATGCTGTCTTGTGAGCCCATaGGATCGACTTTTCTCCACTGCAGGTACAGATAAG +
Preference number: 6 (lower is better)
Translates to: DPFLIECCLVSP*DRLFSTAGTDK
Trigger: CTTATCTGTACCTGCAGTGGAGAAAAGTCGATCTCATGGGCTCACAAGACAGCATTCTATTAAAAATGGGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000395361.3
ENST00000504942.6
ENST00000632716.1
ENST00000666250.1
ENST00000668113.1
CDS TCA 72 bp CTTCTTTTCCTGTCTGAAGCTATGTCACTGGCAATGTaGTGCTTCACGCCTGACCCATTTTTAATAGAATGC +
Preference number: 6 (lower is better)
Translates to: LLFLSEAMSLAM*CFTPDPFLIEC
Trigger: GCATTCTATTAAAAATGGGTCAGGCGTGAAGCATCACATTGCCAGTGACATAGCTTCAGACAGGAAAAGAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000504942.6
ENST00000632716.1
ENST00000666250.1
CDS TCA 72 bp GAAGTTTTCCTGTCTGAAGCTATGTCACTGGCAATGTaGTGCTTCACGCCTGACCCATTTTTAATAGAATGC +
Preference number: 6 (lower is better)
Translates to: EVFLSEAMSLAM*CFTPDPFLIEC
Trigger: GCATTCTATTAAAAATGGGTCAGGCGTGAAGCATCACATTGCCAGTGACATAGCTTCAGACAGGAAAACTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000668113.1
CDS CCA 72 bp TTGGTCGTATCTTCTATTCTGATCTCTGGACACAGATaGGCTTCTTTTCCTTGCATTGTTCAGTGTTTGTCC +
Preference number: 6 (lower is better)
Translates to: LVVSSILISGHR*ASFPCIVQCLS
Trigger: GGACAAACACTGAACAATGCAAGGAAAAGAAGCCCATCTGTGTCCAGAGATCAGAATAGAAGATACGACCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262231.14
ENST00000408894.6
ENST00000507740.5
ENST00000515551.5
CDS CCA 72 bp CAATCTCAACATCATCACAACTTGTATATTCAGGCGTaGAAGCCAATTCCTCCTCTGAACTGCTCAACGAAA +
Preference number: 6 (lower is better)
Translates to: QSQHHHNLYIQA*KPIPPLNCSTK
Trigger: TTTCGTTGAGCAGTTCAGAGGAGGAATTGGCTTCCACGCCTGAATATACAAGTTGTGATGATGTTGAGATTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000262231.14
ENST00000408894.6
ENST00000436393.6
ENST00000504942.6
ENST00000507740.5
ENST00000515551.5
ENST00000632716.1
ENST00000666250.1
ENST00000668113.1
CDS TCA 72 bp CAAGTTCTACTTGTGGTTCAGGTTTGGATTCTAGAATaGTGTTGTACACTTCCTCAAATGTGGCTCCTTGCA +
Preference number: 6 (lower is better)
Translates to: QVLLVVQVWILE*CCTLPQMWLLA
Trigger: TGCAAGGAGCCACATTTGAGGAAGTGTACAACATCATTCTAGAATCCAAACCTGAACCACAAGTAGAACTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000262231.14
ENST00000408894.6
ENST00000436393.6
ENST00000501515.6
ENST00000504942.6
ENST00000507677.5
ENST00000507740.5
ENST00000511046.1
ENST00000512598.5
ENST00000515551.5
ENST00000632716.1
ENST00000666250.1
ENST00000668113.1
CDS GCA 72 bp TTTTCCATGGCAGCTCTACGTTCTGATATAGATCTTTaGCTTGATGGTCGATCCATCCTTAGCATAGAAATC +
Preference number: 6 (lower is better)
Translates to: FSMAALRSDIDL*LDGRSILSIEI
Trigger: GATTTCTATGCTAAGGATGGATCGACCATCAAGGCAAAGATCTATATCAGAACGTAGAGCTGCCATGGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000262231.14
ENST00000408894.6
ENST00000436393.6
ENST00000504942.6
ENST00000507740.5
ENST00000515551.5
ENST00000632716.1
ENST00000666250.1
ENST00000668113.1
CDS CAA 72 bp CCTGTCTCAGACTGGTGTTTCTTTTTCGGCAATGGTTaGTCATCACTTATTGTACCATTCACCTTTTTCTGC +
Preference number: 6 (lower is better)
Translates to: PVSDWCFFFGNG*SSLIVPFTFFC
Trigger: GCAGAAAAAGGTGAATGGTACAATAAGTGATGACAAACCATTGCCGAAAAAGAAACACCAGTCTGAGACAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000666250.1
CDS CAA 90 bp ACTACAAGTTCTACTTGTGGTTCAGGTTTGGATTCTAGAATGATGTaGTACACTTCCTCAAATGTGGCTCCTTGCAGTAGTCTTCCATTC +
Preference number: 6 (lower is better)
Translates to: TTSSTCGSGLDSRMM*YTSSNVAPCSSLPF
Trigger: GAATGGAAGACTACTGCAAGGAGCCACATTTGAGGAAGTGTACAACATCATTCTAGAATCCAAACCTGAACCACAAGTAGAACTTGTAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000262231.14
ENST00000408894.6
ENST00000436393.6
ENST00000501515.6
ENST00000504942.6
ENST00000507677.5
ENST00000507740.5
ENST00000511046.1
ENST00000512598.5
ENST00000515551.5
ENST00000632716.1
ENST00000666250.1
ENST00000668113.1
CDS CAA 90 bp GTGAACAGTGGTTTGATGACATTACTTGTTCTGGCACTGATAATGTaGAGCTTTGAAGATCTCGACCATCATGTCGATAATCTGATACTA +
Preference number: 6 (lower is better)
Translates to: VNSGLMTLLVLALIM*SFEDLDHHVDNLIL
Trigger: TAGTATCAGATTATCGACATGATGGTCGAGATCTTCAAAGCTCAACATTATCAGTGCCAGAACAAGTAATGTCATCAAACCACTGTTCAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000262231.14
ENST00000408894.6
ENST00000436393.6
ENST00000504942.6
ENST00000507677.5
ENST00000507740.5
ENST00000632716.1
ENST00000666250.1
ENST00000668113.1
CDS TCA 72 bp TTTCCCTACCACCTGTCTTTAAAATCATCTATTTGCTaGCACCATCAAATAAAAACACGCCAATCAAGTTCC +
Preference number: 6 (lower is better)
Translates to: FPYHLSLKSSIC*HHQIKTRQSSS
Trigger: GGAACTTGATTGGCGTGTTTTTATTTGATGGTGTCAGCAAATAGATGATTTTAAAGACAGGTGGTAGGGAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262231.14
ENST00000408894.6
ENST00000507740.5
ENST00000515551.5
CDS TCA 72 bp ATACTTCGAATGGTAATCTTGTTCCAGTCTGGGATCTaGTCCGGCTACCTGTTTGTATTTGTTAATTTTCAT +
Preference number: 6 (lower is better)
Translates to: ILRMVILFQSGI*SGYLFVFVNFH
Trigger: ATGAAAATTAACAAATACAAACAGGTAGCCGGATCAGATCCCAGACTGGAACAAGATTACCATTCGAAGTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000408894.6
ENST00000436393.6
ENST00000666250.1
CDS TCA 72 bp TTTTCCTTTGTTCAACCAATGCACATCTGTCGAGCATaGAGCATCATGTTGACAAAAATACATCAACAGTGT +
Preference number: 6 (lower is better)
Translates to: FSFVQPMHICRA*SIMLTKIHQQC
Trigger: ACACTGTTGATGTATTTTTGTCAACATGATGCTTCATGCTCGACAGATGTGCATTGGTTGAACAAAGGAAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000436393.6
CDS CCA 72 bp CAATATATTCTTTGGAATGCCTATGACTTCTCCTGTTaGAGTCCCTATAACTTAAATGATCAGAGTCTTCAT +
Preference number: 6 (lower is better)
Translates to: QYILWNAYDFSC*SPYNLNDQSLH
Trigger: ATGAAGACTCTGATCATTTAAGTTATAGGGACTCCAACAGGAGAAGTCATAGGCATTCCAAAGAATATATTG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000262231.14
ENST00000408894.6
ENST00000436393.6
ENST00000504942.6
ENST00000507740.5
ENST00000515551.5
ENST00000632716.1
ENST00000666250.1
ENST00000668113.1